? Illumina, Inc.
[Heading]
Date	15/4/2010
ContentVersion	4.0
FormatVersion	1.0.0
Number of Probes	47323
Number of Controls	887
[Probes]
Species	Source	Search_Key	Transcript	ILMN_Gene	Source_Reference_ID	RefSeq_ID	Unigene_ID	Entrez_Gene_ID	GI	Accession	Symbol	Protein_Product	Probe_Id	Array_Address_Id	Probe_Type	Probe_Start	Probe_Sequence	Chromosome	Probe_Chr_Orientation	Probe_Coordinates	Cytoband	Definition	Ontology_Component	Ontology_Process	Ontology_Function	Synonyms	Obsolete_Probe_Id
ILMN Controls	ILMN_Controls	ERCC-00162	ILMN_333737	ERCC-00162	ERCC-00162					DQ516750	ERCC-00162		ILMN_3166687	0005270161	S	12	CCCATGTGTCCAATTCTGAATATCTTTCCAGCTAAGTGCTTCTGCCCACC					Methanocaldococcus jannaschii spike-in control MJ-500-33 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00071	ILMN_333646	ERCC-00071	ERCC-00071					DQ883654	ERCC-00071		ILMN_3165565	0004230037	S	563	ACAGAGTTAAGACTTAGATCAGCGAGCAGGTGTACGCCCCGGACCTTGGG					Synthetic construct clone NISTag13 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00009	ILMN_333584	ERCC-00009	ERCC-00009					DQ668364	ERCC-00009		ILMN_3164808	0000060372	S	889	GACACGCGCTTGACACGACTGAATCCAGCTTAAGAGCCCTGCAACGCGAT					Synthetic construct clone TagJ microarray control					
ILMN Controls	ILMN_Controls	ERCC-00053	ILMN_333628	ERCC-00053	ERCC-00053					DQ516785	ERCC-00053		ILMN_3165363	0005260356	S	873	CTGCAATGCCATTAACAACCTTAGCACGGTATTTCCAGTAGCTGGTGAGC					Methanocaldococcus jannaschii spike-in control MJ-1000-68 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00144	ILMN_333719	ERCC-00144	ERCC-00144					DQ854995	ERCC-00144		ILMN_3166504	0006060692	S	398	GCTCGTCACCAACTCGTCACGCGATCGAAATAGCTTGGACTAATGTCCGG					Synthetic construct clone AG006.1100 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00003	ILMN_333578	ERCC-00003	ERCC-00003					DQ516784	ERCC-00003		ILMN_3164750	0006370471	S	901	ATTGAAAGTTTGGGAGGGACTATTCACAGTATAGATGAGGTTGTTGCAGG					Methanocaldococcus jannaschii spike-in control MJ-1000-67 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00138	ILMN_333713	ERCC-00138	ERCC-00138					DQ516777	ERCC-00138		ILMN_3166430	0001710435	S	768	CCACAGCATCCCAGTCGTGAATTAAGTATAAAGCAACTCCACCAATGTTC					Methanocaldococcus jannaschii spike-in control MJ-1000-60 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00084	ILMN_333659	ERCC-00084	ERCC-00084					DQ883682	ERCC-00084		ILMN_3165745	0001400612	S	599	CTCGCTGTGAATCTACTGCAGAACTATGGGTTTGCTAGCGCGCCGGTATC					Synthetic construct clone NISTag41 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00017	ILMN_333592	ERCC-00017	ERCC-00017					DQ459420	ERCC-00017		ILMN_3164915	0005130189	S	755	GGGAACCGAATTACACAACGTAAGGACGTACCTGCTCCTACCCCCGAACC					Bases different from GenBank: 5					
ILMN Controls	ILMN_Controls	ERCC-00057	ILMN_333632	ERCC-00057	ERCC-00057					DQ668366	ERCC-00057		ILMN_3165415	0000070278	S	852	CCCGTATATGGGCTCGGTTGACCTCTATTGGGCGTTGTTGACCCGAATTC					Synthetic construct clone TagQ microarray control					
ILMN Controls	ILMN_Controls	ERCC-00041	ILMN_333616	ERCC-00041	ERCC-00041					EF011069	ERCC-00041		ILMN_3165201	0002320315	S	715	CATCCCAAAAAGGGCAAGAGATTGCTCCGGAAGATTTGTCTGCCAGTTCC					Synthetic construct spike-in microarray control O-sialoglycoprotein endopeptidase (gcp) gene, complete cds					
ILMN Controls	ILMN_Controls	ERCC-00156	ILMN_333731	ERCC-00156	ERCC-00156					DQ883643	ERCC-00156		ILMN_3166630	0002750053	S	193	CCCGAGGTAGACTATCTTCCAGATGATGCCATACGTTCACTCAATCGCGC					Synthetic construct clone NISTag2 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00075	ILMN_333650	ERCC-00075	ERCC-00075					DQ516778	ERCC-00075		ILMN_3165619	0000070477	S	900	CCCTAATCCCATACTTACAGATTGTGTGCTCATGACTTCCACAGACGTGC					Methanocaldococcus jannaschii spike-in control MJ-1000-61 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00099	ILMN_333674	ERCC-00099	ERCC-00099					DQ875387	ERCC-00099		ILMN_3165933	0002710279	S	1245	TTGATTCCAGGGGCCATGCAGGAGCTTGAAGCACTCGGCTGCAAAGTGAG					Synthetic construct microarray control PHE gene, complete sequence					
ILMN Controls	ILMN_Controls	ERCC-00022	ILMN_333597	ERCC-00022	ERCC-00022					DQ855004	ERCC-00022		ILMN_3164979	0001070725	S	394	GTAAGCCGGCGACATATCTAGCAAAACATAGTCCCCCTTCTGCTCAGAGG					Synthetic construct clone AG019.0111 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00170	ILMN_333745	ERCC-00170	ERCC-00170					DQ516773	ERCC-00170		ILMN_3166789	0006590497	S	295	GTTGGAGACCCATTGCAGGCAGGGGTTTTAGCTGTTATGGCTATTGCTGA					Methanocaldococcus jannaschii spike-in control MJ-1000-56 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00028	ILMN_333603	ERCC-00028	ERCC-00028					DQ459419	ERCC-00028		ILMN_3165033	0000780445	S	908	TCGGTACGCTCGAAAGCGCAGGTGGCTCCCAAATCGTGGGGAGTTAATCG					Bases different from GenBank: 12					
ILMN Controls	ILMN_Controls	ERCC-00081	ILMN_333656	ERCC-00081	ERCC-00081					DQ854991	ERCC-00081		ILMN_3165699	0000290433	S	285	CGTCGCTTAAACGTTGGTTCAGGGCTCCATATATACATCTGCCGTGCCCC					Bases different from GenBank: 2					
ILMN Controls	ILMN_Controls	ERCC-00042	ILMN_333617	ERCC-00042	ERCC-00042					DQ516783	ERCC-00042		ILMN_3165218	0007570685	S	241	GGGATTCCAACATGGTCTCTGAATACCTTTGGTGCTGCCCTGTCCCTCCT					Methanocaldococcus jannaschii spike-in control MJ-1000-66 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00136	ILMN_333711	ERCC-00136	ERCC-00136					EF011063	ERCC-00136		ILMN_3166404	0006550369	S	936	GAAGAACTTGGACTCGGACTTCGCAAAGACGATGACTAGTTTCCCTTGTG					Synthetic construct spike-in microarray control DNA-directed RNA polymerase alpha subunit (rpoA) gene, complete cds					
ILMN Controls	ILMN_Controls	ERCC-00109	ILMN_333684	ERCC-00109	ERCC-00109					DQ854998	ERCC-00109		ILMN_3166075	0005960474	S	157	GACGCAACTAGATCATGGGAGTGCCCCAAGTAAAAATTGTGTGTCAGGGC					Bases different from GenBank: 1					
ILMN Controls	ILMN_Controls	ERCC-00033	ILMN_333608	ERCC-00033	ERCC-00033					DQ516796	ERCC-00033		ILMN_3165100	0004560477	S	349	TCCTTGGGAGCTGCAATGGCTGCAAGTGGTGGTATCGCCTTATATCACGC					Methanocaldococcus jannaschii spike-in control MJ-2000-79 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00117	ILMN_333692	ERCC-00117	ERCC-00117					DQ459412	ERCC-00117		ILMN_3166194	0005870615	S	773	GCGGTGAGTCACGTACGCAGACCTGAAAATTAAAGATCCGGACAGGCCCG					Bases different from GenBank: 9					
ILMN Controls	ILMN_Controls	ERCC-00154	ILMN_333729	ERCC-00154	ERCC-00154					DQ854997	ERCC-00154		ILMN_3166596	0000380170	S	115	GTTGGTCCGAGGAGGCATATAGGAAACGATGGGCACGCGCTATTCAGACG					Bases different from GenBank: 1					
ILMN Controls	ILMN_Controls	ERCC-00014	ILMN_333589	ERCC-00014	ERCC-00014					DQ875385	ERCC-00014		ILMN_3164875	0002970682	S	1790	GCCAGTTTATCCCGTCAAAGGATTCCGTTTCTACTCCTCTGACGAATGGG					Bases different from GenBank: 3					
ILMN Controls	ILMN_Controls	ERCC-00085	ILMN_333660	ERCC-00085	ERCC-00085					DQ883669	ERCC-00085		ILMN_3165757	0006560370	S	433	CGGATTCATTACCGCTCCACCGGCAGCGTTCCGTTACATCCAACTAGGTG					Synthetic construct clone NISTag28 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00108	ILMN_333683	ERCC-00108	ERCC-00108					DQ668365	ERCC-00108		ILMN_3166057	0001340064	S	746	CAGCTTGCGCCTATTATATGCCTGACGCGGGATCTATCAGAACGACTCGG					Bases different from GenBank: 2					
ILMN Controls	ILMN_Controls	ERCC-00025	ILMN_333600	ERCC-00025	ERCC-00025					DQ883689	ERCC-00025		ILMN_3165027	0004120470	S	1612	TCGCAAAAGGTTGTCTAGAAAAGGGCCGTGCGCGCAGTCTACTGCTACCG					Synthetic construct clone NISTag48 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00039	ILMN_333614	ERCC-00039	ERCC-00039					DQ883656	ERCC-00039		ILMN_3165170	0006040278	S	486	CAGGTCGCTCACGATCGGCGTGCGCATTTTCGTGAATCATGTATAGTGGT					Synthetic construct clone NISTag15 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00142	ILMN_333717	ERCC-00142	ERCC-00142					DQ883646	ERCC-00142		ILMN_3166475	0006350242	S	306	AGGCCCTGGTTTCCATGGGTCAGCGCAAGTACAGGCGAGCAGATACAACC					Bases different from GenBank: 2					
ILMN Controls	ILMN_Controls	ERCC-00058	ILMN_333633	ERCC-00058	ERCC-00058					DQ459418	ERCC-00058		ILMN_3165426	0005570400	S	794	GGCAAACGAATACATGGAAAGTGGGGCCGGTCGGATCACCAAGATAAGTG					Bases different from GenBank: 10					
ILMN Controls	ILMN_Controls	ERCC-00073	ILMN_333648	ERCC-00073	ERCC-00073					DQ668358	ERCC-00073		ILMN_3165590	0007330465	S	491	CGTCGCATTCTCTCACGTTACGGCTGATTCTCTAGGCTTACGCGCATGAG					Synthetic construct clone TagC microarray control					
ILMN Controls	ILMN_Controls	ERCC-00164	ILMN_333739	ERCC-00164	ERCC-00164					DQ516779	ERCC-00164		ILMN_3166721	0001820564	S	913	CTGTAGCAACAGCTTTAGCTAATAATGTCTTTCCAGTTCCTGGTGGTCCG					Methanocaldococcus jannaschii spike-in control MJ-1000-62 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00160	ILMN_333735	ERCC-00160	ERCC-00160					DQ883658	ERCC-00160		ILMN_3166673	0005550681	S	320	TGTAGGAGTTATGCGCCTTATCGCGAAGGTAGTTACTCTTGCCAGTGGGC					Bases different from GenBank: 2					
ILMN Controls	ILMN_Controls	ERCC-00163	ILMN_333738	ERCC-00163	ERCC-00163					DQ668359	ERCC-00163		ILMN_3166703	0001440767	S	456	CCGCGAGCGACTGTAAACTAATCGGGGAACTTATTATAGAGCCGGTCCAG					Synthetic construct clone TagD microarray control					
ILMN Controls	ILMN_Controls	ERCC-00096	ILMN_333671	ERCC-00096	ERCC-00096					DQ459429	ERCC-00096		ILMN_3165896	0003890619	S	593	GACCTAATTGGCGCACAGTACTAGGCATCGTCATCCAATGCGACGAGTCC					Bases different from GenBank: 3					
ILMN Controls	ILMN_Controls	ERCC-00059	ILMN_333634	ERCC-00059	ERCC-00059					DQ668356	ERCC-00059		ILMN_3165438	0005360059	S	313	AGGGTCGGCTCAACAGTGTATCCGGTGGACAAGCACTGACACGCGATGAC					Synthetic construct clone TagA microarray control					
ILMN Controls	ILMN_Controls	ERCC-00078	ILMN_333653	ERCC-00078	ERCC-00078					DQ883673	ERCC-00078		ILMN_3165668	0000240370	S	618	CGTTGGGCGCTGTCCAAGGTACCCTCAGTCTGTATTTCATGCCCTCAAAT					Synthetic construct clone NISTag32 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00043	ILMN_333618	ERCC-00043	ERCC-00043					DQ516787	ERCC-00043		ILMN_3165229	0002320427	S	843	CTGCTTATTAGCAATTGCTGGAGGAGTTGGTGTGGAGAATGTTGAAGAGC					Methanocaldococcus jannaschii spike-in control MJ-1000-70 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00157	ILMN_333732	ERCC-00157	ERCC-00157					DQ839618	ERCC-00157		ILMN_3166640	0001660692	S	605	TCCTGCATCAATACGCGGCACCGGGGGTCCGATAGCATCTCGCCTTAGAT					Bases different from GenBank: 2					
ILMN Controls	ILMN_Controls	ERCC-00044	ILMN_333619	ERCC-00044	ERCC-00044					DQ459424	ERCC-00044		ILMN_3165245	0004730551	S	764	ATCCACGCAGTCCGAGACAGCGCACACTCGCTGTAGAGGGTTTCAATCCG					Bases different from GenBank: 29					
ILMN Controls	ILMN_Controls	ERCC-00148	ILMN_333723	ERCC-00148	ERCC-00148					DQ883642	ERCC-00148		ILMN_3166569	0004890220	S	352	GCCATGCTGAGTAGACCTGGCGTCTACCCCTCCAAACGCATTCTTATTGG					Synthetic construct clone NISTag1 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00060	ILMN_333635	ERCC-00060	ERCC-00060					DQ516763	ERCC-00060		ILMN_3165457	0000450059	S	376	GCACTTCTAACGATTGGCTCCTCCCCCTCTTTTAAAACAGTTCTTTAGCC					Methanocaldococcus jannaschii spike-in control MJ-500-46 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00111	ILMN_333686	ERCC-00111	ERCC-00111					DQ883685	ERCC-00111		ILMN_3166098	0001980026	S	685	ACATCGCGCATTGGGGGTCTCGGTCAAGAGGAGCGCGTAAGTAAAGACGC					Synthetic construct clone NISTag44 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00031	ILMN_333606	ERCC-00031	ERCC-00031					DQ459431	ERCC-00031		ILMN_3165086	0001300039	S	588	GGCGAGGAACACAACAATTCTGCGGGTTAGCAGGAAGGTTAGGGAACTCG					Bases different from GenBank: 7					
ILMN Controls	ILMN_Controls	ERCC-00168	ILMN_333743	ERCC-00168	ERCC-00168					DQ516776	ERCC-00168		ILMN_3166775	0001430162	S	531	GAGAATGCATTTAAAAGGGTGGTTTTCCAGTAGCTACCTCTCCAGCAACC					Methanocaldococcus jannaschii spike-in control MJ-1000-59 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00104	ILMN_333679	ERCC-00104	ERCC-00104					DQ516815	ERCC-00104		ILMN_3165993	0000360634	S	1762	GGTGTCTTGCATAGCCAAAGCTAAAGCTAAACCCCTACTCCTAAACCAGC					Methanocaldococcus jannaschii spike-in control MJ-2000-98 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00130	ILMN_333705	ERCC-00130	ERCC-00130					EF011072	ERCC-00130		ILMN_3166311	0004010240	S	592	CGAGTGCTGACAGCTATGAAGAAGACCTCCTTTTGCCACGCTGGACCCGA					Synthetic construct spike-in microarray control hypothetical protein (ynbA) gene, partial cds					
ILMN Controls	ILMN_Controls	ERCC-00147	ILMN_333722	ERCC-00147	ERCC-00147					DQ516790	ERCC-00147		ILMN_3166551	0004050220	S	283	GGAGGAAGGATTGGAGAGTGTCCAGGGCATTTTGGGCATATAGAGTTGGC					Methanocaldococcus jannaschii spike-in control MJ-1000-73 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00098	ILMN_333673	ERCC-00098	ERCC-00098					DQ459415	ERCC-00098		ILMN_3165920	0000940086	S	952	GTACGCGCCTGGATAGATCGACGGCTGTTTAATAAGAGTCACTCCAGGCC					Bases different from GenBank: 2					
ILMN Controls	ILMN_Controls	ERCC-00074	ILMN_333649	ERCC-00074	ERCC-00074					DQ516754	ERCC-00074		ILMN_3165604	0003710431	S	236	CCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTATAACCCC					Methanocaldococcus jannaschii spike-in control MJ-500-37 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00158	ILMN_333733	ERCC-00158	ERCC-00158					DQ516795	ERCC-00158		ILMN_3166655	0006250202	S	709	CGGAACTGGCGAATTCTACCCAAGCGACGCATTTATCGTTGGTATCGACC					Methanocaldococcus jannaschii spike-in control MJ-1000-78 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00034	ILMN_333609	ERCC-00034	ERCC-00034					DQ855001	ERCC-00034		ILMN_3165113	0005260497	S	848	CCGAGTAACGAGCCAGACTAATCCGGAACATTCGTAAGCGATAGTGGTTG					Bases different from GenBank: 6					
ILMN Controls	ILMN_Controls	ERCC-00013	ILMN_333588	ERCC-00013	ERCC-00013					EF011062	ERCC-00013		ILMN_3164858	0001010100	S	433	GGCTTGCAGGAAGCAAAACCAGGTGAACGTTTGTCGAATATTTCCCACGC					Synthetic construct spike-in microarray control methionine aminopeptidase (map) gene, partial cds					
ILMN Controls	ILMN_Controls	ERCC-00062	ILMN_333637	ERCC-00062	ERCC-00062					DQ516786	ERCC-00062		ILMN_3165484	0006760035	S	486	GTTCTGGACTTCCTGAGGTTGGAGAGACATTATGTTGGTTTGAAGGAGGC					Methanocaldococcus jannaschii spike-in control MJ-1000-69 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00069	ILMN_333644	ERCC-00069	ERCC-00069					DQ459421	ERCC-00069		ILMN_3165547	0002970424	S	813	CCCATGGTGGCTGATATAGAAACATATCCTCGCGGACTTCATCGCCGGGC					Bases different from GenBank: 16					
ILMN Controls	ILMN_Controls	ERCC-00116	ILMN_333691	ERCC-00116	ERCC-00116					DQ668367	ERCC-00116		ILMN_3166177	0006220286	S	1531	CGGTGATCCGGCTAAACCTCTGGGCATCCGTATTAAGCGACATTCCTACG					Bases different from GenBank: 4					
ILMN Controls	ILMN_Controls	ERCC-00150	ILMN_333725	ERCC-00150	ERCC-00150					DQ883659	ERCC-00150		ILMN_3166578	0007320692	S	545	CAGGTGGGCACAAATAGCTAAAGCCTCGTCCGCATTACGCCCCATGGCTC					Synthetic construct clone NISTag18 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00165	ILMN_333740	ERCC-00165	ERCC-00165					DQ668363	ERCC-00165		ILMN_3166728	0004780255	S	518	AGCTCGGTTGCTTGGATGGTGCAGCTTACTTCGCGTACCTGCTGTTTGCA					Synthetic construct clone TagH microarray control					
ILMN Controls	ILMN_Controls	ERCC-00120	ILMN_333695	ERCC-00120	ERCC-00120					DQ854992	ERCC-00120		ILMN_3166223	0000540228	S	418	CGTACCGCGCGAGTGACACGCGTTGACGTTACATGGTAAACTCGTAGCCA					Synthetic construct clone AG003.0011 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00046	ILMN_333621	ERCC-00046	ERCC-00046					DQ516748	ERCC-00046		ILMN_3165277	0001980008	S	86	GGGTATGCTGTTCGATTTCTTAAAGGACTGAATATTCGGTGGCAGTATGG					Methanocaldococcus jannaschii spike-in control MJ-500-31 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00134	ILMN_333709	ERCC-00134	ERCC-00134					DQ516739	ERCC-00134		ILMN_3166368	0000670687	S	150	AGTGACGCCTCCCCTAATATAAGCGGTTATTGGGATATAGACCACGCTCG					Methanocaldococcus jannaschii spike-in control MJ-250-22 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00035	ILMN_333610	ERCC-00035	ERCC-00035					DQ459413	ERCC-00035		ILMN_3165130	0002030731	S	697	GGAGCCCTAAATCAGTTAAATACGGGGAAGGAGTCTCGCCCTCCGGGTGA					Bases different from GenBank: 1					
ILMN Controls	ILMN_Controls	ERCC-00145	ILMN_333720	ERCC-00145	ERCC-00145					DQ875386	ERCC-00145		ILMN_3166519	0002680349	S	641	CTGCTGGGTGTCCATTGCCATATCGGCTCGCAAATCTTTGATACGGCCGG					Synthetic construct microarray control LYS gene, complete sequence					
ILMN Controls	ILMN_Controls	ERCC-00095	ILMN_333670	ERCC-00095	ERCC-00095					DQ516759	ERCC-00095		ILMN_3165877	0000780201	S	341	TGCAGTCATCTTTAACCTCATCCCACAAAGCCGCTTTCTTTAAAGCCCAC					Methanocaldococcus jannaschii spike-in control MJ-500-42 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00077	ILMN_333652	ERCC-00077	ERCC-00077					DQ516742	ERCC-00077		ILMN_3165650	0006900164	S	100	TGGAGTTATGCCTATAACGTCATGTTGGACAGACCCCTGTTTGAGCAGAC					Methanocaldococcus jannaschii spike-in control MJ-250-25 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00113	ILMN_333688	ERCC-00113	ERCC-00113					DQ883663	ERCC-00113		ILMN_3166132	0006400259	S	474	GTGTATAATGTCTCGGACCCGTCGCAACGGTTGTTAATATGACAGGCCGC					Synthetic construct clone NISTag22 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00076	ILMN_333651	ERCC-00076	ERCC-00076					DQ883650	ERCC-00076		ILMN_3165638	0002320487	S	361	TCACGTGGACCAAAGCTGATTGATTACGGGACTGGCCGTAAGTGCTGCCC					Bases different from GenBank: 1					
ILMN Controls	ILMN_Controls	ERCC-00051	ILMN_333626	ERCC-00051	ERCC-00051					DQ516740	ERCC-00051		ILMN_3165334	0000290369	S	21	GTAGCTGGGGGAATTTTGCTCTTTAAAATAGCTTGGGACATGCTTCACGC					Methanocaldococcus jannaschii spike-in control MJ-250-23 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00079	ILMN_333654	ERCC-00079	ERCC-00079					DQ883652	ERCC-00079		ILMN_3165687	0004050528	S	270	CGGTACGACGTTCATTTCCTCTGCTTTGGAGTTATCAATTCGTGACCCCG					Synthetic construct clone NISTag11 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00092	ILMN_333667	ERCC-00092	ERCC-00092					DQ459425	ERCC-00092		ILMN_3165829	0000020678	S	877	TGGGTAGCTAGTCGCGGAGGCACGTTACCGCGCACAACCCCTATTCGTTT					Bases different from GenBank: 7					
ILMN Controls	ILMN_Controls	ERCC-00137	ILMN_333712	ERCC-00137	ERCC-00137					DQ855000	ERCC-00137		ILMN_3166414	0004780739	S	318	CAAAAAAGCAGCCGGGGAAAAGGTGGTCTCGCCCGAAAGCCATGACCTCC					Synthetic construct clone AG011.0011 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00016	ILMN_333591	ERCC-00016	ERCC-00016					DQ883664	ERCC-00016		ILMN_3164905	0001450040	S	435	CGGATTAGGAGGCTTACGGGGGAACCTACAATTGTTCGCCGCATGGTCCG					Synthetic construct clone NISTag23 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00112	ILMN_333687	ERCC-00112	ERCC-00112					DQ459422	ERCC-00112		ILMN_3166114	0004590193	S	736	CCCGATTGGATTATGGCGAGCTGCCGCATTGACGGACATACCTTTGAACG					Bases different from GenBank: 7					
ILMN Controls	ILMN_Controls	ERCC-00002	ILMN_333577	ERCC-00002	ERCC-00002					DQ459430	ERCC-00002		ILMN_3164734	0000430220	S	741	AACCGCGCAATTATCCCCGTCCTGATTTACTGGACTCGCAACGTGGGTCC					Bases different from GenBank: 3					
ILMN Controls	ILMN_Controls	ERCC-00171	ILMN_333746	ERCC-00171	ERCC-00171					DQ854994	ERCC-00171		ILMN_3166804	0004890520	S	173	TCCCCCTAATCGAGACGCTGCAATAACACAGGGGCATACAGTAACCAGGC					Synthetic construct clone AG006.0011 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00131	ILMN_333706	ERCC-00131	ERCC-00131					DQ855003	ERCC-00131		ILMN_3166325	0001450220	S	517	AAGTAATGTGAGCGTACTTCACCTGCTCCGGTACAAGCCGCCATGTGCTC					Synthetic construct clone AG016.1110 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00019	ILMN_333594	ERCC-00019	ERCC-00019					DQ883651	ERCC-00019		ILMN_3164950	0004880307	S	350	CCCTAGGTAAACACGGTCGTTATCCCCTAGAGCGTGAAGCGGCTGTAGAT					Synthetic construct clone NISTag10 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00097	ILMN_333672	ERCC-00097	ERCC-00097					DQ516758	ERCC-00097		ILMN_3165903	0000540114	S	110	GTGGTATCCACACCATAAAGGGGCTACGCCCTCTTGGGATACTCCCCTAA					Methanocaldococcus jannaschii spike-in control MJ-500-41 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00143	ILMN_333718	ERCC-00143	ERCC-00143					DQ668362	ERCC-00143		ILMN_3166491	0007510242	S	359	CGGGCGGCTATTGACGAACTCTCCGGTATATGCTCTACATCTGCAGGGAA					Synthetic construct clone TagG microarray control					
ILMN Controls	ILMN_Controls	ERCC-00086	ILMN_333661	ERCC-00086	ERCC-00086					DQ516791	ERCC-00086		ILMN_3165768	0002070379	S	777	TGCAGTTGGAGGGATGGAGCAGAGAAAAATACACATGTTAGCAAGGGAGC					Methanocaldococcus jannaschii spike-in control MJ-1000-74 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00012	ILMN_333587	ERCC-00012	ERCC-00012					DQ883670	ERCC-00012		ILMN_3164838	0003870280	S	653	CGCCCTGTCCACTCTACTCAGGCGTAATCATCGCGGAAGGCTATCCACAG					Synthetic construct clone NISTag29 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00040	ILMN_333615	ERCC-00040	ERCC-00040					DQ883661	ERCC-00040		ILMN_3165190	0006350025	S	306	AGGTACGTCGCTTCGACCAGAACGAGAGTTCGCAGCAAGGGGGAGGAGTT					Synthetic construct clone NISTag20 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00004	ILMN_333579	ERCC-00004	ERCC-00004					DQ516752	ERCC-00004		ILMN_3164765	0006940240	S	89	CCATTTCCTTAAATTCTTCTGGGTCTGCTGACAAAGCATGATCAGGACCT					Methanocaldococcus jannaschii spike-in control MJ-500-35 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00024	ILMN_333599	ERCC-00024	ERCC-00024					DQ854993	ERCC-00024		ILMN_3165007	0006940193	S	211	ATGGACACCCGTAATCGTGCCCAAGTTTAACTGGTCGGTAGGTGGCAGGC					Synthetic construct clone AG005.0110 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00126	ILMN_333701	ERCC-00126	ERCC-00126					DQ459427	ERCC-00126		ILMN_3166255	0005570482	S	815	CGAGCGCGCGAATGTATACACTATTATCTCATGTGCATGTCCAGAGCGGG					Bases different from GenBank: 22					
ILMN Controls	ILMN_Controls	ERCC-00054	ILMN_333629	ERCC-00054	ERCC-00054					DQ516731	ERCC-00054		ILMN_3165378	0001820215	S	184	TCAGTTGAGTGGAGGGCAACAACAGGAGTTGCTATAGCGAGGGCTTTGGC					Methanocaldococcus jannaschii spike-in control MJ-250-14 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00048	ILMN_333623	ERCC-00048	ERCC-00048					DQ883671	ERCC-00048		ILMN_3165303	0001990497	S	758	GGAATAGTGCAGGACCCGAAACCGCCATAGGGAAAGGGTGAGCGAGGTAG					Synthetic construct clone NISTag30 external RNA control sequence					
ILMN Controls	ILMN_Controls	ERCC-00061	ILMN_333636	ERCC-00061	ERCC-00061					DQ459426	ERCC-00061		ILMN_3165474	0002370458	S	703	TCACGGGCCCTGATACTGGTCGAAGTTGCGCCCTATGCTTACACGGCGCA					Bases different from GenBank: 10					
ILMN Controls	ILMN_Controls	ERCC-00067	ILMN_333642	ERCC-00067	ERCC-00067					DQ883653	ERCC-00067		ILMN_3165533	0005890475	S	460	AGGTGCGAGCAAACGTCTGGTGCTCTAATGGCAAACATCTGCAATCAGCG					Bases different from GenBank: 1					
ILMN Controls	ILMN_Controls	ERCC-00123	ILMN_333698	ERCC-00123	ERCC-00123					DQ516782	ERCC-00123		ILMN_3166238	0000510202	S	343	AACGGAGGTGTTCCAAATGCAGCTGCCTTCCTAACATGAGGGTCCTCTGG					Methanocaldococcus jannaschii spike-in control MJ-1000-65 genomic sequence					
ILMN Controls	ILMN_Controls	ERCC-00083	ILMN_333658	ERCC-00083	ERCC-00083					DQ516780	ERCC-00083		ILMN_3165727	0000070474	S	563	CTGCCTGGAATCTTCCACCTTTATGGTAGAGTATTGCTTGAACTAACCTC					Methanocaldococcus jannaschii spike-in control MJ-1000-63 genomic sequence					
Homo sapiens	RefSeq	XM_933824.1	ILMN_44919	LOC23117	XM_933824.1	XM_933824.1		23117	89040007	XM_933824.1	LOC23117	XP_938917.1	ILMN_1725881	0001710221	I	122	GGCTCCTCTTTGGGCTCCTACTGGAATTTATCAGCCATCAGTGCATCTCT	16	-	21766363-21766363:21769901-21769949	16p12.2a	PREDICTED: Homo sapiens KIAA0220-like protein, transcript variant 11 (LOC23117), mRNA.					
Homo sapiens	Unigene	Hs.575038	ILMN_127219	HS.575038	Hs.575038		Hs.575038		10437021	AK024680			ILMN_1910180	0005900364	S	1409	ACACCTTCAGGAGGGAAGCCCTTATTTCTGGGTTGAACTCCCCTTCCATG	2	+	206352194-206352243		Homo sapiens cDNA: FLJ21027 fis, clone CAE07110					
Homo sapiens	RefSeq	XM_938851.1	ILMN_139282	FCGR2B	XM_938851.1	XM_938851.1		2213	88952550	XM_938851.1	FCGR2B	XP_943944.1	ILMN_1804174	0002480717	I	1643	TAGGGGCAATAGGCTATACGCTACAGCCTAGGTGTGTAGTAGGCCACACC				1q23.3b	PREDICTED: Homo sapiens Fc fragment of IgG, low affinity IIb, receptor (CD32) (FCGR2B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11955599] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2139735] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2142460] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2142460] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11567028] [evidence IPI]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]		
Homo sapiens	RefSeq	NM_017583.3	ILMN_5006	TRIM44	NM_017583.3	NM_017583.3		54765	29029528	NM_017583.3	TRIM44	NP_060053.2	ILMN_1796063	0001300239	S	2901	CCTGCCTGTCTGCCTGTGACCTGTGTACGTATTACAGGCTTTAGGACCAG	11	+	35786070-35786119	11p13a	Homo sapiens tripartite motif-containing 44 (TRIM44), mRNA.				MGC3490; MC7; HSA249128; DIPB	MGC3490; MC7; HSA249128; DIPB
Homo sapiens	RefSeq	XR_017421.2	ILMN_164938	LOC400129	XR_017421.2	XR_017421.2		400129	169205856	XR_017421.2	LOC400129		ILMN_3284771	0000830703	M	1140	AGGGATAGTAACACTGGCTCAGAGAGCAACAGCCCAACAGTGGAGGAGCC	13	+	44068133-44068182	13q14.11e	PREDICTED: Homo sapiens misc_RNA (LOC400129), miscRNA.					
Homo sapiens	RefSeq	XR_017421.2	ILMN_164938	LOC400129	XR_017421.2	XR_017421.2		400129	169205856	XR_017421.2	LOC400129		ILMN_3208259	0003800152	A	595	TACCTCCTCATCAGTGAAATCCTTAGTGGGAGTGTGGTGGCAGACGTTCG	13	+	44067588-44067637	13q14.11e	PREDICTED: Homo sapiens misc_RNA (LOC400129), miscRNA.					
Homo sapiens	RefSeq	XM_936379.1	ILMN_38756	LOC653895	XM_936379.1	XM_936379.1		653895	89033487	XM_936379.1	LOC653895	XP_941472.1	ILMN_1811966	0004480719	S	25	CTAGCAGGGAGCGGTGAGGGAGAGCGGCTGGATTTCTTGCGGGATCTGCA				10q11.23b	PREDICTED: Homo sapiens similar to protein geranylgeranyltransferase type I, beta subunit (LOC653895), mRNA.					
Homo sapiens	RefSeq	NM_001013579.1	ILMN_7652	DGAT2L3	NM_001013579.1	NM_001013579.1		158833	61888901	NM_001013579.1	DGAT2L3	NP_001013597.1	ILMN_1668162	0006020725	S	782	GTCAAGGCTCCACTGGGCTCCTGCCATACTCCAGGCCTATTGTCACTGTG	X	+	69376459-69376508	Xq13.1b	Homo sapiens diacylglycerol O-acyltransferase 2-like 3 (DGAT2L3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: a long-chain-alcohol + acyl-CoA = a long-chain ester + CoA [goid 47196] [evidence IEA]	AWAT1; DGA2	AWAT1; DGA2
Homo sapiens	RefSeq	XM_373469.3	ILMN_35097	LOC387701	XM_373469.3	XM_373469.3		387701	89031576	XM_373469.3	LOC387701	XP_373469.1	ILMN_1715600	0003870215	A	301	GTCCCCAACCCTAACCCGGACCTGGCACATACAAGACATTCAGCAGATGG	10	+	92811754-92811767:92811768-92811803		PREDICTED: Homo sapiens hypothetical LOC387701 (LOC387701), mRNA.					
Homo sapiens	Unigene	Hs.133181	ILMN_77451	HS.133181	Hs.133181		Hs.133181		27826545	BX093329			ILMN_1912287	0002710020	S	324	GTGCCAGCTGCCATTGCACTGCCTCACATTTTCCTTTAGATGTTTGAGCA	3	+	153084777-153084826		BX093329 Soares_parathyroid_tumor_NbHPA Homo sapiens cDNA clone IMAGp998A124183 ; IMAGE:1648403, mRNA sequence					
Homo sapiens	RefSeq	NM_015492.3	ILMN_18382	C15ORF39	NM_015492.4	NM_015492.4		56905	153251858	NM_015492.4	C15orf39	NP_056307.2	ILMN_1793729	0000870110	S	3585	CTTGCCTAGAGAACACACATGGGCTTTGGAGCCCGACAGACCTGGGCTTG	15	+	73290721-73290770	15q24.2a	Homo sapiens chromosome 15 open reading frame 39 (C15orf39), mRNA.				DKFZP434H132; FLJ46337; MGC117209	DKFZP434H132; FLJ46337; MGC117209
Homo sapiens	RefSeq	NM_018921.2	ILMN_22537	PCDHGA9	NM_018921.2	NM_018921.2		56107	14270485	NM_018921.2	PCDHGA9	NP_061744.1	ILMN_2296644	0007510243	I	2759	ATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAACATGGAGGC	5	+	140782854-140782903	5q31.3c	Homo sapiens protocadherin gamma subfamily A, 9 (PCDHGA9), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-A9	PCDH-GAMMA-A9
Homo sapiens	RefSeq	NM_032089.1	ILMN_22537	PCDHGA9	NM_018921.2	NM_018921.2		56107	14270485	NM_018921.2	PCDHGA9	NP_061744.1	ILMN_1711283	0004180259	A	2220	TGTGGGTGTAGATGGGGTTCGAGCTTTCCTACAGACCTATTCTCAGGAGT	5	+	140764923-140764972	5q31.3c	Homo sapiens protocadherin gamma subfamily A, 9 (PCDHGA9), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-A9	PCDH-GAMMA-A9
Homo sapiens	RefSeq	NM_020799.2	ILMN_1387	STAMBPL1	NM_020799.2	NM_020799.2		57559	52694663	NM_020799.2	STAMBPL1	NP_065850.1	ILMN_1682799	0007150059	S	1746	TGTAAGCACCGTCAACATCAGACACCTACTCATGGACATGTGGTTGCCGG	10	+	90664362-90664395:90665200-90665215	10q23.31b	Homo sapiens STAM binding protein-like 1 (STAMBPL1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	bA399O19.2; AMSH-LP; ALMalpha; KIAA1373; FLJ31524; AMSH-FP	bA399O19.2; AMSH-LP; ALMalpha; KIAA1373; FLJ31524; AMSH-FP
Homo sapiens	RefSeq	NR_024167.1	ILMN_365613	MGC3771	NR_024167.1	NR_024167.1		81854	207028177	NR_024167.1	MGC3771		ILMN_3305563	0005960523	M	1087	CAGTGCCTGCTTGGCCCCTGTAGCATTTGAGTTTGCAACTCTGCTTTTGG	16	-	3160538-3160587		Homo sapiens hypothetical LOC81854 (MGC3771), transcript variant 2, non-coding RNA.					
Homo sapiens	RefSeq	NR_024167.1	ILMN_365613	MGC3771	NR_024167.1	NR_024167.1		81854	207028177	NR_024167.1	MGC3771		ILMN_3228954	0005870441	A	629	CAGGAGAGGACACAGAGACACAGAGAAGGAAGCAGAGACTGGAGGGATGC	16	-	3164836-3164883:3164969-3164970		Homo sapiens hypothetical LOC81854 (MGC3771), transcript variant 2, non-coding RNA.					
Homo sapiens	RefSeq	NR_002986.1	ILMN_175579	SNORA60	NR_002986.1	NR_002986.1		677837	91680852	NR_002986.1	SNORA60		ILMN_3243894	0004920296	S	62	GGAATTGCTGAAAGCCGTTTCCCGTGTTTGGAGGGTTCACACCTGTCCCT	20	+	36511487-36511536	20q11.23c	Homo sapiens small nucleolar RNA, H/ACA box 60 (SNORA60), small nucleolar RNA.				ACA60	ACA60
Homo sapiens	RefSeq	NR_024569.1	ILMN_371596	LOC100130872	NR_024569.1	NR_024569.1		100130872	217272881	NR_024569.1	LOC100130872		ILMN_3246479	0004200639	S	4765	GTAAGCCACAAGACCCCAACCCAGATCCCCACAGCAAAGGCGAAGTCACC	4	-	1189737-1189786	4p16.3c	Homo sapiens hypothetical LOC100130872 (LOC100130872), non-coding RNA.					
Homo sapiens	RefSeq	NM_001007532.1	ILMN_1785	STH	NM_001007532.1	NM_001007532.1		246744	56090268	NM_001007532.1	STH	NP_001007533.1	ILMN_1665311	0005340180	S	97	CAGCCTCTGTGTGAGTGGATGATTCAGGTTGCCAGAGACAGAACCCTCAG	17	+	41432579-41432628	17q21.31e	Homo sapiens saitohin (STH), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC163193; MGC163191	MGC163193; MGC163191
Homo sapiens	RefSeq	XM_292820.5	ILMN_178946	LOC342979	XM_292820.6	XM_292820.6		342979	113428124	XM_292820.6	LOC342979	XP_292820.6	ILMN_1657235	0006110274	A	1452	CCACCGAGGGTGAAGAGGCAAGTGGCCCTAAGCAAAAGACGTGCCAGTGT	19	-	14025431-14025480	19p13.12c	PREDICTED: Homo sapiens hypothetical LOC342979 (LOC342979), mRNA.					
Homo sapiens	RefSeq	XM_936926.1	ILMN_171312	LOC728492	XM_001130874.1	XM_001130874.1		728492	113416615	XM_001130874.1	LOC728492	XP_001130874.1	ILMN_1655444	0002570463	I	397	GATGACTGGCTATTTGGAAAACCTGGGTGCTACTGCCAACTGGGTGTATC	5	+	70239388-70239389:70239390-70239437	5q13.2a	PREDICTED: Homo sapiens similar to small EDRK-rich factor 1A, telomeric, transcript variant 4 (LOC728492), mRNA.					
Homo sapiens	RefSeq	XM_943434.1	ILMN_179411	UGT2B7	XM_001128725.1	XM_001128725.1		7364	113416110	XM_001128725.1	UGT2B7	XP_001128725.1	ILMN_1679194	0001190064	A	1441	TAAACACCTTCGGGTTGCAGCCCACGACCTCACCTGGTTCCAGTACCACT				4q13.2c	PREDICTED: Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide B7 (UGT2B7), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2159463] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 2159463] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]		
Homo sapiens	RefSeq	NM_001074.1	ILMN_179411	UGT2B7	XM_001128725.1	XM_001128725.1		7364	113416110	XM_001128725.1	UGT2B7	XP_001128725.1	ILMN_1755897	0005420450	A	1437	GAGCTAAACACCTTCGGGTTGCAGCCCACGACCTCACCTGGTTCCAGTAC				4q13.2c	PREDICTED: Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide B7 (UGT2B7), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2159463] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 2159463] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]		UGT2B9
Homo sapiens	RefSeq	NM_201625.1	ILMN_24114	CLEC12A	NM_201625.1	NM_201625.1		160364	42490743	NM_201625.1	CLEC12A	NP_963919.1	ILMN_1711453	0006020544	I	481	GCCCACAAGGAGGACTTACAATGTGGAACTTAGTCTCTTTCCCTCACTCC	12	+	10023039-10023088	12p13.2c	Homo sapiens C-type lectin domain family 12, member A (CLEC12A), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLL1; MICL; CLL-1; DCAL-2; MGC70602	CLL1; MICL; CLL-1; DCAL-2; MGC70602
Homo sapiens	RefSeq	XM_937104.1	ILMN_33919	LOC648054	XM_937104.1	XM_937104.1		648054	89028492	XM_937104.1	LOC648054	XP_942197.1	ILMN_1656744	0004150010	S	1048	GACATCACTCGGTCTGTGACTTCGGTGCAATCTCCTTCAGGGAAGCCGGG					PREDICTED: Homo sapiens hypothetical protein LOC648054 (LOC648054), mRNA.					
Homo sapiens	RefSeq	NM_152281.1	ILMN_18324	SCYL1BP1	NM_152281.1	NM_152281.1		92344	22748638	NM_152281.1	SCYL1BP1	NP_689494.1	ILMN_2121316	0001400546	S	1757	CCAAACAACTTAAACCAGCATCACTTTTGTCTTCAATTTGCCTTCCAGTG	1	+	168788779-168788828	1q24.2c	Homo sapiens SCY1-like 1 binding protein 1 (SCYL1BP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	NTKL-BP1; MGC51263; NTKLBP1; FLJ11752; MGC70512; RP11-545I10.1	MGC51263; NTKLBP1; FLJ11752; MGC70512; NTKL-BP1; RP11-545I10.1
Homo sapiens	RefSeq	NM_152281.1	ILMN_18324	SCYL1BP1	NM_152281.1	NM_152281.1		92344	22748638	NM_152281.1	SCYL1BP1	NP_689494.1	ILMN_1761911	0000830441	S	1385	TCTAGGGGTATGTTTCACCTTGATTTTGGCCCGGTTCTTTCAGTGTTCCG	1	+	168788407-168788456	1q24.2c	Homo sapiens SCY1-like 1 binding protein 1 (SCYL1BP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	NTKL-BP1; MGC51263; NTKLBP1; FLJ11752; MGC70512; RP11-545I10.1	MGC51263; NTKLBP1; FLJ11752; MGC70512; NTKL-BP1; RP11-545I10.1
Homo sapiens	RefSeq	XM_943466.1	ILMN_45042	RGNEF	XM_932949.2	XM_932949.2		64283	113416641	XM_932949.2	RGNEF	XP_938042.2	ILMN_1807467	0004230026	A	1603	GTTCTAGCCTTGATGCCTTGGACGCCGACAGTGAAGGGGAAGGGCATTCT	5	+	73172341-73172341:73177849-73177897	5q13.2c	PREDICTED: Homo sapiens Rho-guanine nucleotide exchange factor, transcript variant 2 (RGNEF), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Homo sapiens	RefSeq	XM_943475.1	ILMN_45042	RGNEF	XM_932949.2	XM_932949.2		64283	113416641	XM_932949.2	RGNEF	XP_938042.2	ILMN_1652609	0000450240	A	4208	CGCCTTGACCATTCAGGACAGCCACATTGAGATCCACAGGCTGGTTCTCC	5	+	73240995-73241044	5q13.2c	PREDICTED: Homo sapiens Rho-guanine nucleotide exchange factor, transcript variant 2 (RGNEF), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]		
Homo sapiens	RefSeq	XM_927776.1	ILMN_36506	LOC643426	XM_927776.1	XM_927776.1		643426	89059810	XM_927776.1	LOC643426	XP_932869.1	ILMN_1720944	0003360368	S	210	TGGGCTTGCAACGTGGATGAAGAGATGAAGAAAATTCATCAAGTTATCCG	X	-	69074497-69074546		PREDICTED: Homo sapiens similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1) (LOC643426), mRNA.					
Homo sapiens	Unigene	Hs.551815	ILMN_110723	HS.551815	Hs.551815		Hs.551815		3523250	AF088044			ILMN_1818577	0003130152	S	408	TCTCCCAGTGGAGGTGTTTCAGCGGATGCTGCGGTCTTACCCTTGTAGCC	1	+	204744311-204744360		Homo sapiens full length insert cDNA clone ZD58F01					
Homo sapiens	RefSeq	NM_001006945.1	ILMN_12093	C1ORF103	NM_001006945.1	NM_001006945.1		55791	55743125	NM_001006945.1	C1orf103	NP_001006946.1	ILMN_2385662	0002100176	A	981	GCTGAGAGAGAAAGAAGCAGCTCTTGAAGAAATGCGTAAGAAGATGCACC	1	-	111490588-111490637	1p13.3a	Homo sapiens chromosome 1 open reading frame 103 (C1orf103), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]	RIF1; FLJ11269; RP11-96K19.1	RIF1; FLJ11269; RP11-96K19.1
Homo sapiens	RefSeq	NM_030752.2	ILMN_180673	TCP1	NM_030752.2	NM_030752.2		6950	57863256	NM_030752.2	TCP1	NP_110379.2	ILMN_2313434	0004230136	A	2260	GCCCAAGGCTATAGCCCCTCCTTCAATATTGACCTAACGGGGGAGAAAAG	6	-	160199673-160199722	6q25.3f	Homo sapiens t-complex 1 (TCP1), transcript variant 1, mRNA.				TCP-1-alpha; CCT1; D6S230E; CCTa; CCT-alpha	TCP-1-alpha; CCT1; D6S230E; CCTa; CCT-alpha
Homo sapiens	RefSeq	NM_144704.1	ILMN_16355	AIFM3	NM_001018060.1	NM_001018060.1		150209	65787453	NM_001018060.1	AIFM3	NP_001018070.1	ILMN_1704173	0004260551	A	1982	AGCTCACATGCAGTAGACTTGGGCAGGCAAAGGGGGCACCAAGGGCACAG	22	+	19665320-19665320:19665321-19665369	22q11.21e	Homo sapiens apoptosis-inducing factor, mitochondrion-associated, 3 (AIFM3), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15764604] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15764604] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 15764604] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15764604] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15764604] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15764604] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 15764604] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [pmid 15764604] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process in which the membrane potential of the mitochondria changes in the depolarizing direction from the resting potential, from negative to positive [goid 51882] [pmid 15764604] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [pmid 15764604] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	FLJ30473; AIFL	FLJ30473; AIFL
Homo sapiens	RefSeq	XR_039719.1	ILMN_337469	LOC729212	XR_039719.1	XR_039719.1		729212	169215968	XR_039719.1	LOC729212		ILMN_3298873	0005560538	M	773	CCGCGAGACCAAGGAAGCCAGGCCGCCCAAGACCGCCTCAAGGTGTTTAA				22q12.2b	PREDICTED: Homo sapiens misc_RNA (LOC729212), miscRNA.					
Homo sapiens	RefSeq	NM_024710.1	ILMN_27084	ISOC2	NM_024710.1	NM_024710.1		79763	13376006	NM_024710.1	ISOC2	NP_078986.1	ILMN_1769158	0006650692	S	958	GCTGCTCCCGGAAATGCAAATGAGACTCCTGGAAACTGGGTGGGAATTGG	19	-	60656282-60656331	19q13.42c	Homo sapiens isochorismatase domain containing 2 (ISOC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17658461] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17658461] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that decreases the stability of a protein, making it more vulnerable to degradative processes or aggregation [goid 31648] [pmid 17658461] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]		
Homo sapiens	RefSeq	NM_000319.3	ILMN_29393	PEX5	NM_000319.3	NM_000319.3		5830	37059745	NM_000319.3	PEX5	NP_000310.2	ILMN_1660232	0006650189	S	2986	GGGGAGATACACTAACCCCCAGAAATGACTGCTAAGCCTCTTGCCTTGTC	12	+	7255160-7255209	12p13.31c	Homo sapiens peroxisomal biogenesis factor 5 (PEX5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 7719337] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [pmid 11336669] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11336669] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7719337] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The process of directing proteins towards the peroxisome using signals contained within the protein [goid 6625] [pmid 9668159] [evidence IMP]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which proteins are moved across the peroxisomal membrane into the matrix. It is likely that the peroxisome targeting sequence receptor remains associated with cargo proteins during translocation [goid 16561] [pmid 7719337] [evidence IDA]; The process by which proteins are moved across the peroxisomal membrane into the matrix. It is likely that the peroxisome targeting sequence receptor remains associated with cargo proteins during translocation [goid 16561] [pmid 11336669] [evidence IDA]; The orderly movement of cells from one site to another in the cerebral cortex [goid 21795] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IEA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [pmid 12456682] [evidence IDA]	Interacting selectively with a type 1 peroxisome targeting signal, a tripeptide with the consensus sequence (S/A/C)-(K/R/H)-L [goid 5052] [pmid 12456682] [evidence IDA]; Interacting selectively with a type 1 peroxisome targeting signal, a tripeptide with the consensus sequence (S/A/C)-(K/R/H)-L [goid 5052] [pmid 9668159] [evidence IMP]; Interacting selectively with a type 1 peroxisome targeting signal, a tripeptide with the consensus sequence (S/A/C)-(K/R/H)-L [goid 5052] [pmid 7719337] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10837480] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9653144] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10562279] [evidence IPI]	PTS1R; PXR1	PTS1R; PXR1
Homo sapiens	RefSeq	NM_017939.1	ILMN_25953	FLJ20718	NM_017939.1	NM_017939.1		55027	8923644	NM_017939.1	FLJ20718	NP_060409.1	ILMN_1763663	0005080746	I	2163	GATGAGATCTGTGTGGCATTTCTAGCGCTCTCTAAATTATGTCTCTGGCA	16	+	48697301-48697350	16q12.1c	Homo sapiens hypothetical protein FLJ20718 (FLJ20718), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_004153.2	ILMN_21836	ORC1L	NM_004153.2	NM_004153.2		4998	31795543	NM_004153.2	ORC1L	NP_004144.2	ILMN_1727459	0006660333	S	2674	ACCATGGCCGTGTGTTCTCACCTGGGCTCCTGTCGCCTCCTGCTTGTGGA	1	-	52838934-52838983	1p32.3d	Homo sapiens origin recognition complex, subunit 1-like (yeast) (ORC1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7502077] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15684404] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11125146] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11931757] [evidence EXP]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [pmid 7502077] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7502077] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11931757] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	HSORC1; ORC1; PARC1	HSORC1; ORC1; PARC1
Homo sapiens	RefSeq	XM_371829.3	ILMN_40037	LOC389405	XM_371829.3	XM_371829.3		389405	88995770	XM_371829.3	LOC389405	XP_371829.3	ILMN_1814429	0006180280	A	550	AACCTGGGGTCTGGCATAGCAAGCATCAGGAGCGAGCCCCTCAATCTGAG	6	-	64556964-64557013	6q12b	PREDICTED: Homo sapiens similar to Neurogenic locus Notch protein precursor (LOC389405), mRNA.					
Homo sapiens	RefSeq	NR_029599.1	ILMN_388150	MIR30D	NR_029599.1	NR_029599.1		407033	262206170	NR_029599.1	MIR30D		ILMN_3308996	0000630754	S	14	CCCCGACTGGAAGCTGTAAGACACAGCTAAGCTTTCAGTCAGATGTTTGC				8q24.22d	Homo sapiens microRNA 30d (MIR30D), microRNA.					
Homo sapiens	Unigene	Hs.559673	ILMN_113780	HS.559673	Hs.559673		Hs.559673		46305344	BX351797			ILMN_1849784	0007320189	S	337	GGCGGAGCTGGGATTCAAATGCAAGCATTCTGGCTCCAGGAGACACGCTC	1	-	45055461-45055510		BX351797 Homo sapiens PLACENTA COT 25-NORMALIZED Homo sapiens cDNA clone CS0DI043YL14 3-PRIME, mRNA sequence					
Homo sapiens	RefSeq	NM_015132.2	ILMN_39508	SNX13	NM_015132.3	NM_015132.3		23161	87196349	NM_015132.3	SNX13	NP_055947.1	ILMN_1797082	0001500307	S	3307	GCAACATTGAGAGAAAACTGCCCCCATCTCAAGCAAGAATGGCGTTGGTT	7	-	17799924-17799973	7p21.1b	Homo sapiens sorting nexin 13 (SNX13), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	RGS-PX1; KIAA0713	RGS-PX1; KIAA0713
Homo sapiens	RefSeq	NM_173685.1	ILMN_15101	NSMCE2	NM_173685.1	NM_173685.1		286053	27734760	NM_173685.1	NSMCE2	NP_775956.1	ILMN_1693210	0002480719	S	987	TGCAGGGACACCAGCAGCCTACCTCCTACCCCAGCTGTCTGTTGAGAGCA	8	+	126448336-126448385	8q24.13d-q24.13e	Homo sapiens non-SMC element 2, MMS21 homolog (S. cerevisiae) (NSMCE2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ32440; MMS21; NSE2; C8orf36	NSE2; FLJ32440; MMS21; C8orf36
Homo sapiens	RefSeq	NM_006659.1	ILMN_46158	TUBGCP2	NM_006659.2	NM_006659.2		10844	89363032	NM_006659.2	TUBGCP2	NP_006650.1	ILMN_1775074	0002630356	S	2896	GACTGTGAGCACGGCATGGCCAGCGTCATCTCCAGGCTTGACTTCAATGG	10	-	135093390-135093405:135094777-135094810	10q26.3f	Homo sapiens tubulin, gamma complex associated protein 2 (TUBGCP2), mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [pmid 9566967] [evidence TAS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9566967] [evidence TAS]; The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [pmid 9566967] [evidence TAS]		Spc97p; GCP2; SPBC97; MGC138162	Spc97p; GCP2; SPBC97
Homo sapiens	RefSeq	NM_001250.3	ILMN_22820	CD40	NM_001250.4	NM_001250.4		958	91105420	NM_001250.4	CD40	NP_001241.1	ILMN_1779257	0006420520	A	843	CATGGATGCCAACCGGTCACCCAGGAGGATGGCAAAGAGAGTCGCATCTC	20	+	44191018-44191067	20q13.12b	Homo sapiens CD40 molecule, TNF receptor superfamily member 5 (CD40), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16893496] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10748139] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10748139] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10748139] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 2475341] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [pmid 9468137] [evidence NAS]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 8605945] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 12223522] [evidence IPI]	TNFRSF5; p50; MGC9013; Bp50; CDW40	CDW40; TNFRSF5; p50; MGC9013; Bp50
Homo sapiens	RefSeq	XM_937697.1	ILMN_32854	LOC648628	XM_937697.1	XM_937697.1		648628	89037126	XM_937697.1	LOC648628	XP_942790.1	ILMN_1684523	0002640750	S	121	TTAGAACTGGAACATCAAGTTGTGACTGAATTGCTGCAGTCTCATAAAAC					PREDICTED: Homo sapiens hypothetical protein LOC648628 (LOC648628), mRNA.					
Homo sapiens	RefSeq	XM_001723671.1	ILMN_349001	LOC100128895	XM_001723671.1	XM_001723671.1		100128895	169204451	XM_001723671.1	LOC100128895	XP_001723723.1	ILMN_3269225	0006840070	M	139	CAAGTGATTTCCAGAGCCACTGCATGGACCTTCCTGAGATGGTGGCAAGC	12	+	116962573-116962622	12q24.23a	PREDICTED: Homo sapiens hypothetical protein LOC100128895 (LOC100128895), mRNA.					
Homo sapiens	RefSeq	NM_139343.1	ILMN_22961	BIN1	NM_139343.1	NM_139343.1		274	21536399	NM_139343.1	BIN1	NP_647593.1	ILMN_2309245	0000650553	A	2262	AGGGGCGTTCTCCCAAAGATTAGGTCGTTTTCCAAAGAGCCGCGTCCCGG	2	-	127805917-127805966	2q14.3d	Homo sapiens bridging integrator 1 (BIN1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9182667] [evidence TAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8782822] [evidence TAS]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC10367; AMPH2; DKFZp547F068; SH3P9; AMPHL	MGC10367; AMPH2; DKFZp547F068; SH3P9; AMPHL
Homo sapiens	RefSeq	NM_032320.4	ILMN_30066	BTBD10	NM_032320.5	NM_032320.5		84280	93277081	NM_032320.5	BTBD10	NP_115696.2	ILMN_1809344	0004250544	S	1956	TCACACAGCTAGGTCTTTTCAGAAGTGGTGGAAATTGGCAGCTGGGGTAC	11	-	13410415-13410464	11p15.2c	Homo sapiens BTB (POZ) domain containing 10 (BTBD10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC13007; GMRP-1; GMRP1	MGC13007; GMRP-1; GMRP1
Homo sapiens	RefSeq	NM_024348.2	ILMN_13766	DCTN3	NM_007234.3	NM_007234.3		11258	22165423	NM_007234.3	DCTN3	NP_009165.1	ILMN_1762281	0007320187	A	520	CCAAGCAATTCGTGCAGTGGGATGAGCTACTTTGCCAGCTAGAGGCCGCC	9	-	34613805-34613854	9p13.3c	Homo sapiens dynactin 3 (p22) (DCTN3), transcript variant 1, mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [pmid 9722614] [evidence IPI]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 9722614] [evidence IDA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 9722614] [evidence IDA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 9722614] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9722614] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9722614] [evidence IPI]	MGC111190; DCTN22; DCTN-22	MGC111190; DCTN22; DCTN-22
Homo sapiens	RefSeq	NM_004309.3	ILMN_15874	ARHGDIA	NM_004309.3	NM_004309.3		396	34147601	NM_004309.3	ARHGDIA	NP_004300.1	ILMN_1734742	0004760255	S	1687	CAGGCCTTCCCTGACCCAGCCAGGAACAAACAAGGGACCAAGTGCACACA	17	-	79825722-79825771	17q25.3g	Homo sapiens Rho GDP dissociation inhibitor (GDI) alpha (ARHGDIA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 16130169] [evidence TAS]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 16130169] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 8262133] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 8262133] [evidence TAS]	Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [pmid 8262133] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]	RHOGDI-1; GDIA1; MGC117248; RHOGDI	RHOGDI-1; GDIA1; MGC117248; RHOGDI
Homo sapiens	RefSeq	NM_012224.1	ILMN_26831	NEK1	NM_012224.1	NM_012224.1		4750	41872672	NM_012224.1	NEK1	NP_036356.1	ILMN_2162234	0004760674	S	5237	CACAATATGCCAAGTATAACCTGGTTTCGTTAGAGGTGTCTACAGTCCAG	4	-	170551218-170551267	4q33a	Homo sapiens NIMA (never in mitosis gene a)-related kinase 1 (NEK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15604234] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15604234] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14690447] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14690447] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA1901; DKFZp686D06121; DKFZp686K12169; NY-REN-55; MGC138800	KIAA1901; DKFZp686D06121; DKFZp686K12169; NY-REN-55; MGC138800
Homo sapiens	RefSeq	NR_003591.1	ILMN_307705	TTTY8B	NR_003591.1	NR_003591.1		100101118	149944533	NR_003591.1	TTTY8B		ILMN_3240008	0007610500	S	1	GCCTGTCTTTTCTGTGGGATACACAGGACAGTGCCATGATTCTAGTAGAT	Y	-	6401573-6401622	Yp11.2h	Homo sapiens testis-specific transcript, Y-linked 8B (non-protein coding) (TTTY8B), non-coding RNA.					
Homo sapiens	RefSeq	NM_017827.2	ILMN_20962	SARS2	NM_017827.2	NM_017827.2		54938	20149644	NM_017827.2	SARS2	NP_060297.1	ILMN_1655684	0004730168	S	1925	CCAGTGGGAAGCAGGACGTCTGGGCTTTACGGTTCTAGGGACAGGAGAAG	19	-	44097828-44097877	19q13.2a	Homo sapiens seryl-tRNA synthetase 2, mitochondrial (SARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10764807] [evidence ISS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6434] [pmid 10764807] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-serine + tRNA(Ser) = AMP + diphosphate + L-seryl-tRNA(Ser) [goid 4828] [pmid 10764807] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10764807] [evidence ISS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	SERS; SARSM; FLJ20450; mtSerRS; SYS; SerRSmt; SARS	SERS; SARSM; FLJ20450; mtSerRS; SYS; SerRSmt; SARS
Homo sapiens	RefSeq	XR_038557.1	ILMN_337321	LOC645381	XR_038557.1	XR_038557.1		645381	169216644	XR_038557.1	LOC645381		ILMN_3201937	0005050598	A	1024	GGCAACTGCCTAGTTAATGCCAGTGGCCTGTACCATATTATGGAAAACTG	X	+	64545498-64545547	Xq11.1c	PREDICTED: Homo sapiens misc_RNA (LOC645381), miscRNA.					
Homo sapiens	RefSeq	XR_038254.1	ILMN_339918	LOC728992	XR_038254.1	XR_038254.1		728992	169165589	XR_038254.1	LOC728992		ILMN_3300190	0005420112	M	699	AACGACAGATAGGATGAGACCCACCGTCACTGGGGCGGCAACGTCCTGGG				3q13.33c	PREDICTED: Homo sapiens misc_RNA (LOC728992), miscRNA.					
Homo sapiens	RefSeq	NR_002955.1	ILMN_179137	SNORA14A	NR_002955.1	NR_002955.1		677801	91680822	NR_002955.1	SNORA14A		ILMN_3241036	0005810343	S	53	GCGAATGCTATAGAAATTGCAGGAAAGTCCAAAGGGCTGCGCGTCTCCTG	7	+	75411089-75411138	7q11.23e	Homo sapiens small nucleolar RNA, H/ACA box 14A (SNORA14A), small nucleolar RNA.				ACA14a	ACA14a
Homo sapiens	RefSeq	XM_941991.1	ILMN_40117	LOC650339	XM_941991.1	XM_941991.1		650339	88970990	XM_941991.1	LOC650339	XP_947084.1	ILMN_1735832	0003310608	I	178	ATCTCCCGGAGGTTTAAGGCTCAGCAGGATCAGCTGGTCCTGATCTTGTC					PREDICTED: Homo sapiens similar to ataxin-1 ubiquitin-like interacting protein, transcript variant 1 (LOC650339), mRNA.					
Homo sapiens	RefSeq	XM_942196.1	ILMN_167787	LRRC48	XM_001133757.1	XM_001133757.1		83450	113427299	XM_001133757.1	LRRC48	XP_001133757.1	ILMN_1754567	0006940338	I	1338	CTGGTGACCCAGAGACACATTATTGACCCTCTCCTAGCCTCCATTTCCTC				17p11.2g	PREDICTED: Homo sapiens leucine rich repeat containing 48 (LRRC48), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_932049.1	ILMN_34468	LOC648993	XM_943534.1	XM_943534.1		648993	89037173	XM_943534.1	LOC648993	XP_948627.1	ILMN_1686807	0005270020	S	61	CCCCCGGGGCGAGCCGGGGCAGCGCTGCACTCGGTGCGCACCGGCAGCGT					PREDICTED: Homo sapiens hypothetical LOC648993 (LOC648993), mRNA.					
Homo sapiens	RefSeq	XM_943178.1	ILMN_30706	LOC647543	XM_943178.1	XM_943178.1		647543	88981079	XM_943178.1	LOC647543	XP_948271.1	ILMN_1671123	0006960706	I	834	AGAGGACGTCTTATTATCTGGTGTCTGGCTTGCTGATTTAATAACCTAGA					PREDICTED: Homo sapiens hypothetical protein LOC647543, transcript variant 2 (LOC647543), mRNA.					
Homo sapiens	RefSeq	NM_004793.2	ILMN_5804	LONP1	NM_004793.2	NM_004793.2		9361	21396488	NM_004793.2	LONP1	NP_004784.2	ILMN_1766125	0000540717	S	2809	TTCATCACCGAGGGCCTGGAGGTGCACTTCGTGGAACACTACCGGGAGAT	19	-	5692097-5692146	19p13.3b	Homo sapiens lon peptidase 1, mitochondrial (LONP1), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8248235] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [pmid 8248235] [evidence TAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	LonHS; hLON; LONP; MGC1498; PRSS15; PIM1; LON	LonHS; hLON; LONP; MGC1498; PRSS15; PIM1; LON
Homo sapiens	RefSeq	XM_930094.1	ILMN_36711	LOC647083	XM_930094.1	XM_930094.1		647083	88953721	XM_930094.1	LOC647083	XP_935187.1	ILMN_1654249	0001030609	S	234	GAAAGATGGGGAGCCTCGGTCTAGTGGATGCGAACACACCCTTACTGCTG	2	+	149377139-149377162:149377514-149377539		PREDICTED: Homo sapiens similar to Kinesin heavy chain isoform 5C (Kinesin heavy chain neuron-specific 2) (LOC647083), mRNA.					
Homo sapiens	RefSeq	NM_006425.3	ILMN_179557	SLU7	NM_006425.4	NM_006425.4		10569	119393888	NM_006425.4	SLU7	NP_006416.3	ILMN_1685369	0000050475	S	1754	GGCCCGCCTTCTTCATGTCAAGGAGACCATGCAGATTGATGAGAGGAAGC	5	-	159830404-159830453	5q33.3d	Homo sapiens SLU7 splicing factor homolog (S. cerevisiae) (SLU7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 10197984] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 15728250] [evidence IDA]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 15181151] [evidence IDA]	The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition [goid 380] [pmid 15728250] [evidence IDA]; Recognition of the intron 3'-splice site by components of the assembling U2- or U12-type spliceosome [goid 389] [pmid 15728250] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Catalysis of the second transesterification reaction of spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure [goid 386] [pmid 10197984] [evidence IDA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 15181151] [evidence IDA]; Interacting selectively with the pre-mRNA 3' splice site sequence [goid 30628] [pmid 15728250] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hSlu7; 9G8; MGC9280	hSlu7; MGC9280
Homo sapiens	RefSeq	NR_029833.1	ILMN_389019	MIR30C1	NR_029833.1	NR_029833.1		407031	262206065	NR_029833.1	MIR30C1		ILMN_3310815	0003710717	S	8	GTAGTGTGTGTAAACATCCTACACTCTCAGCTGTGAGCTCAAGGTGGCTG				1p34.2c	Homo sapiens microRNA 30c-1 (MIR30C1), microRNA.					
Homo sapiens	RefSeq	NM_012460.2	ILMN_9968	TIMM9	NM_012460.2	NM_012460.2		26520	21359892	NM_012460.2	TIMM9	NP_036592.1	ILMN_1653709	0004900209	S	661	GCAGCCAAAGCAGGACTCCTTGGCCAACCACGATAGAGAAGTCCTGATGG	14	-	58875737-58875751:58875752-58875786	14q23.1b	Homo sapiens translocase of inner mitochondrial membrane 9 homolog (yeast) (TIMM9), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [pmid 10552927] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [evidence IEA]	The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [pmid 10552927] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10552927] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the mitochondria inner membrane. Inner membrane proteins are first imported into the matrix space where the matrix-targeting sequence is removed; how these proteins then are incorporated into the inner membrane is not known [goid 45039] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10552927] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TIM9A; TIM9	TIM9A; TIM9
Homo sapiens	RefSeq	NM_014287.3	ILMN_163182	NOMO1	NM_014287.3	NM_014287.3		23420	51944952	NM_014287.3	NOMO1	NP_055102.3	ILMN_2126957	0002650040	S	3732	TTGAGGAGGAAGGGGACAGTTGCAGTCTCACTTGGGACAGGCCACAGCCA	16	+	14897000-14897003:14897004-14897049	16p13.11b	Homo sapiens NODAL modulator 1 (NOMO1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]	Nomo; PM5	Nomo; PM5
Homo sapiens	RefSeq	NM_014287.3	ILMN_163182	NOMO1	NM_014287.3	NM_014287.3		23420	51944952	NM_014287.3	NOMO1	NP_055102.3	ILMN_1678730	0003310056	S	3364	TTCCCCCCACTGCTCAGAGACGGCGAGAACTATGTTGTGCTTCTGGACTC	16	+	14888194-14888220:14890454-14890476	16p13.11b	Homo sapiens NODAL modulator 1 (NOMO1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]	Nomo; PM5	Nomo; PM5
Homo sapiens	RefSeq	NM_173614.2	ILMN_163182	NOMO1	NM_014287.3	NM_014287.3		23420	51944952	NM_014287.3	NOMO1	NP_055102.3	ILMN_1702114	0001430450	A	1030	CCCGTGTTCCACGTCATGGGATTCTCCGTCACCGGGAGGGTCTTGAACGG	16	+	14858575-14858624	16p13.11b	Homo sapiens NODAL modulator 1 (NOMO1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]	Nomo; PM5	Nomo; PM5
Homo sapiens	Unigene	Hs.537754	ILMN_103482	HS.537754	Hs.537754		Hs.537754		6039557	AW084405			ILMN_1842887	0006520037	S	105	GCCAGAGAGTGAGAGGTGTTATTTCAGTTAGGGTAGTCAGGGAAGCCTCT	1	+	185954199-185954248		xc56f12.x1 NCI_CGAP_Eso2 Homo sapiens cDNA clone IMAGE:2588303 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002249.3	ILMN_29003	KCNN3	NM_002249.4	NM_002249.4		3782	116805329	NM_002249.4	KCNN3	NP_002240.3	ILMN_1801608	0005570068	I	990	GACAACCATGCCCACCAGACCCTGCTCCATCACCCTAATGCCACCCACAA	1	-	154841715-154841764	1q21.3e	Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 (KCNN3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	SKCA3; KCa2.3; hSK3; SK3	SKCA3; KCa2.3; hSK3; SK3
Homo sapiens	RefSeq	NM_170782.1	ILMN_29003	KCNN3	NM_002249.4	NM_002249.4		3782	116805329	NM_002249.4	KCNN3	NP_002240.3	ILMN_1744897	0001570184	A	2702	TTAGGTGCCTCTACTTGGGAGCGGGAAGAGGAGATGACAGGAAGCGACGC	1	-	154680210-154680259	1q21.3e	Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 (KCNN3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	SKCA3; KCa2.3; hSK3; SK3	SKCA3; KCa2.3; hSK3; SK3
Homo sapiens	Unigene	Hs.445843	ILMN_93075	HS.445843	Hs.445843		Hs.445843		13672898	BG621527			ILMN_1828584	0005130397	S	524	AGAGTAGGGATGCGGAAGCAGCGAGTGGTCAGGAGTGTGCGTGCCAAAAG	2	-	218789480-218789529		602617110F1 NIH_MGC_79 Homo sapiens cDNA clone IMAGE:4730811 5, mRNA sequence					
Homo sapiens	RefSeq	NM_014819.2	ILMN_7559	PJA2	NM_014819.3	NM_014819.3		9867	142350628	NM_014819.3	PJA2	NP_055634.2	ILMN_1688702	0000520431	S	4655	AGCCCAGGTCTAAATGTAATGGTTGGTTTATTGTTCTATAACCCCAGCCC				5q21.3e	Homo sapiens praja 2, RING-H2 motif containing (PJA2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0438; RNF131; Neurodap1	KIAA0438; RNF131; Neurodap1
Homo sapiens	RefSeq	XR_038688.1	ILMN_348745	LOC100128096	XR_038688.1	XR_038688.1		100128096	169166670	XR_038688.1	LOC100128096		ILMN_3268938	0006100152	M	11	AGGGTCTTGCTATGTTGCCCAGGCTGGACTCAAACTCCTGGGCTCAAGTG				4p16.1c	PREDICTED: Homo sapiens hypothetical LOC100128096 (LOC100128096), miscRNA.					
Homo sapiens	RefSeq	XM_934125.1	ILMN_43071	PLGLA1	XM_934125.1	XM_934125.1		285189	88953426	XM_934125.1	PLGLA1	XP_939218.1	ILMN_1807393	0004560520	I	567	GGTAATACGCAACAGACCTTTAGGATTCATCCCAAGCCAAAAATGGGGGA	2	+	106423671-106423720	2q12.2b	PREDICTED: Homo sapiens plasminogen-like A1, transcript variant 4 (PLGLA1), mRNA.					
Homo sapiens	RefSeq	NM_005224.1	ILMN_18757	ARID3A	NM_005224.2	NM_005224.2		1820	118026938	NM_005224.2	ARID3A	NP_005215.1	ILMN_1670130	0006510553	S	2546	CCACACACTCACCACTCCCAGCTTCTCGTGTCCAGTGAAACCCCTGAACC	19	+	923539-923588	19p13.3i	Homo sapiens AT rich interactive domain 3A (BRIGHT-like) (ARID3A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	E2FBP1; BRIGHT; DRIL3; DRIL1	E2FBP1; BRIGHT; DRIL3; DRIL1
Homo sapiens	RefSeq	NM_058165.1	ILMN_14124	MOGAT1	NM_058165.2	NM_058165.2		116255	148746190	NM_058165.2	MOGAT1	NP_477513.2	ILMN_1765971	0005960196	S	933	GAACCCGACCCAGGAGCAGATTGAGGAGTTACATCAGACCTATATGGAGG	2	+	223282730-223282779	2q36.1c	Homo sapiens monoacylglycerol O-acyltransferase 1 (MOGAT1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 6651] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1,2-diacylglycerol = CoA + triacylglycerol [goid 4144] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DGAT2L1; DGAT2L; MGAT1	DGAT2L1; DGAT2L; MGAT1
Homo sapiens	Unigene	Hs.537363	ILMN_103267	HS.537363	Hs.537363		Hs.537363		2841309	AA781978			ILMN_1913478	0004850010	S	347	CAGAGGCTCATGGGTCTTACCATGGGTGATCAAGGAAGGGCTGGTAACTC	21	-	13977560-13977609		ai78g06.s1 Soares_testis_NHT Homo sapiens cDNA clone 1376986 3, mRNA sequence					
Homo sapiens	RefSeq	NM_182767.3	ILMN_177948	SLC6A15	NM_182767.3	NM_182767.3		55117	60115819	NM_182767.3	SLC6A15	NP_877499.1	ILMN_1659166	0006270445	A	1144	TGACCATCTGCTTGTTGGCTGCCTGGGTCATGGTTTGCTTGGCTATGATC	12	-	83801792-83801841	12q21.31d-q21.31e	Homo sapiens solute carrier family 6, member 15 (SLC6A15), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [pmid 11112352] [evidence NAS]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	FLJ10316; DKFZp761I0921; NTT73; hv7-3; MGC87066; V7-3	FLJ10316; NTT73; V7-3; DKFZp761I0921; hv7-3; MGC87066
Homo sapiens	RefSeq	NM_182767.3	ILMN_177948	SLC6A15	NM_182767.3	NM_182767.3		55117	60115819	NM_182767.3	SLC6A15	NP_877499.1	ILMN_1810533	0000290685	I	4315	CAGTGTGAAGTAAGTTCTCATCCAACATTTCTCCTGGCCATCCATTCTCC	12	-	83777831-83777880	12q21.31d-q21.31e	Homo sapiens solute carrier family 6, member 15 (SLC6A15), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [pmid 11112352] [evidence NAS]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	FLJ10316; DKFZp761I0921; NTT73; hv7-3; MGC87066; V7-3	FLJ10316; NTT73; V7-3; DKFZp761I0921; hv7-3; MGC87066
Homo sapiens	RefSeq	NM_000990.2	ILMN_139166	RPL27A	NM_000990.2	NM_000990.2		6157	14141189	NM_000990.2	RPL27A	NP_000981.1	ILMN_1713086	0004920193	S	27	CATCCAGACTGAGGAAGACCCGGAAACTTAGGGGCCACGTGAGCCACGGC	11	+	8661326-8661375	11p15.4b	Homo sapiens ribosomal protein L27a (RPL27A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 7772601] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7772601] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 7772601] [evidence TAS]	MGC87238	MGC87238
Homo sapiens	RefSeq	NM_145048.2	ILMN_20873	C4ORF28	NM_145048.2	NM_145048.2		133015	34222178	NM_145048.2	C4orf28	NP_659485.1	ILMN_2205695	0001260634	S	1457	CCAGGCTGGTCTCAGAATTCTGGTGAGTGATCCTCCCACAGTGGACTTCC	4	+	20338715-20338764	4p15.31d	Homo sapiens chromosome 4 open reading frame 28 (C4orf28), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC29898	MGC29898
Homo sapiens	RefSeq	NM_178230.1	ILMN_1203	PPIAL4A	NM_178230.1	NM_178230.1		164022	30102943	NM_178230.1	PPIAL4A	NP_839944.1	ILMN_3236259	0005890528	S	257	TGTGTCAGGGTGGTGACTTCACACGCCATAATGGCACTGGTGACAAGTCC	1	-	147955113-147955162	1q21.1d	Homo sapiens peptidylprolyl isomerase A (cyclophilin A)-like 4A (PPIAL4A), mRNA.				MGC163248; MGC163250; COAS2	MGC163248; MGC163250; COAS2
Homo sapiens	RefSeq	XM_940643.1	ILMN_32897	LOC400948	XM_940643.1	XM_940643.1		400948	88955023	XM_940643.1	LOC400948	XP_945736.1	ILMN_1739335	0005860608	A	505	AGGGTTCCAGGACATAGTCTGAGGCAAGATGGAGGGTATGAGGGGCCTTC					PREDICTED: Homo sapiens similar to CG33774-PA (LOC400948), mRNA.					
Homo sapiens	RefSeq	XM_934289.1	ILMN_45028	LOC653352	XM_934289.1	XM_934289.1		653352	89040102	XM_934289.1	LOC653352	XP_939382.1	ILMN_1803834	0003140332	I	184	TCTCCCTGCCTCAGTTTCCTCACCCTATCCCTGGGCAACCACTAATTTGC	16	-	28315037-28315086		PREDICTED: Homo sapiens similar to eukaryotic translation initiation factor 3, subunit 8, transcript variant 4 (LOC653352), mRNA.					
Homo sapiens	RefSeq	NM_005451.3	ILMN_28275	PDLIM7	NM_005451.3	NM_005451.3		9260	42741673	NM_005451.3	PDLIM7	NP_005442.2	ILMN_2396639	0005870546	A	499	GCTGGTCCCAGATGCCAGCAAGCAGCGGCTGATGGAGAACACAGAGGACT	5	-	176918082-176918131	5q35.3a	Homo sapiens PDZ and LIM domain 7 (enigma) (PDLIM7), transcript variant 1, mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 7929196] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_213636.1	ILMN_28275	PDLIM7	NM_005451.3	NM_005451.3		9260	42741673	NM_005451.3	PDLIM7	NP_005442.2	ILMN_1814985	0000770639	A	577	GCGTTCCTTCCGCATCCTTGCCCACCTCACAGGCACCGAGTTCATGCAAG	5	-	176917901-176917907:176918011-176918053	5q35.3a	Homo sapiens PDZ and LIM domain 7 (enigma) (PDLIM7), transcript variant 1, mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 7929196] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	Unigene	Hs.443185	ILMN_92511	HS.443185	Hs.443185		Hs.443185		26671142	CA841942			ILMN_1911503	0007100544	S	232	CATTACTCAGAAGCCACTCTGTGGAAGGTACTGGGGCAAGTGAGGCCGTC	20	-	33266972-33267021		ip26b05.y1 HR85 islet Homo sapiens cDNA clone IMAGE:6218432 5, mRNA sequence					
Homo sapiens	RefSeq	XM_938803.1	ILMN_176400	CST6	XM_001129442.1	XM_001129442.1		1474	113422960	XM_001129442.1	CST6	XP_001129442.1	ILMN_1680462	0006860427	I	48	AGCAGGACAAAGGGACCACGGCTTGGAATGCTGGCGCAGAAAGCAGACCT				11q13.1d	PREDICTED: Homo sapiens cystatin E/M (CST6), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9099741] [evidence TAS]	 [goid 4869] [pmid 8995380] [evidence TAS]		
Homo sapiens	RefSeq	NM_001323.2	ILMN_176400	CST6	XM_001129442.1	XM_001129442.1		1474	113422960	XM_001129442.1	CST6	XP_001129442.1	ILMN_1697733	0004010491	A	220	CAGCAGGAGAAGCTGCGCTGTGACTTTGAGGTCCTTGTGGTTCCCTGGCA				11q13.1d	PREDICTED: Homo sapiens cystatin E/M (CST6), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9099741] [evidence TAS]	 [goid 4869] [pmid 8995380] [evidence TAS]		
Homo sapiens	RefSeq	NM_033012.2	ILMN_1354	TNFSF11	NM_033012.2	NM_033012.2		8600	21536432	NM_033012.2	TNFSF11	NP_143026.1	ILMN_1658713	0006380242	I	2	CGCCTGGCCTATTGAAGGTTTTTAATCTTCAGAGTTTCGACTTTATCAAC	13	+	42043796-42043845	13q14.11c	Homo sapiens tumor necrosis factor (ligand) superfamily, member 11 (TNFSF11), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10708588] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9568710] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9312132] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9312132] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [pmid 17241109] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone resorption [goid 45780] [pmid 17241109] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 9568710] [evidence NAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [pmid 9367155] [evidence NAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [pmid 9312132] [evidence NAS]	RANKL; hRANKL2; ODF; OPGL; CD254; sOdf; OPTB2; TRANCE	RANKL; hRANKL2; ODF; OPGL; CD254; sOdf; OPTB2; TRANCE
Homo sapiens	RefSeq	XM_001715385.1	ILMN_334010	LOC100130000	XM_001715385.1	XM_001715385.1		100130000	169161062	XM_001715385.1	LOC100130000	XP_001715437.1	ILMN_3234948	0002000360	S	282	GATACATGATCCCTTAATTCAGGCTCAGGCTGAAGAACTGACCCACTTAC	1	+	142496534-142496583	1q21.1a	PREDICTED: Homo sapiens similar to hCG1810766 (LOC100130000), mRNA.					
Homo sapiens	RefSeq	NM_181599.2	ILMN_8069	KRTAP13-1	NM_181599.2	NM_181599.2		140258	109288005	NM_181599.2	KRTAP13-1	NP_853630.2	ILMN_2055638	0006250326	S	471	CTTCTAGGAGCTGCCAGTCTTCTTGCTACAGACCAACTTGTGGATCAGGC	21	+	30690733-30690782	21q22.11a	Homo sapiens keratin associated protein 13-1 (KRTAP13-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP13.1; KRTAP13.1	KAP13.1
Homo sapiens	RefSeq	NM_024688.1	ILMN_21881	C10ORF68	NM_024688.1	NM_024688.1		79741	13375961	NM_024688.1	C10orf68	NP_078964.1	ILMN_1662791	0005890162	S	2485	CAGCTGGAAATACAGTGGATCAACAGGGTAGGCCCAGATCACAGAAGGCC	10	+	33205452-33205501	10p11.22b	Homo sapiens chromosome 10 open reading frame 68 (C10orf68), mRNA.				FLJ13031; MGC149767; RP11-479G22.1; dJ1104A8.1	FLJ13031; MGC149767; RP11-479G22.1; dJ1104A8.1
Homo sapiens	RefSeq	NM_183043.1	ILMN_2359	RNF6	NM_183043.1	NM_183043.1		6049	34305292	NM_183043.1	RNF6	NP_898864.1	ILMN_2275455	0001980014	I	6	TTGTGAGAATCTAGGTCTCTAAGGGAAGCGTTACTTGAGGCTCGGTTGGG	13	-	26795923-26795972	13q12.13b	Homo sapiens ring finger protein (C3H2C3 type) 6 (RNF6), transcript variant 4, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10331950] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	DKFZp686P0776	DKFZp686P0776
Homo sapiens	RefSeq	NM_003214.2	ILMN_162768	TEAD3	NM_003214.3	NM_003214.3		7005	148277074	NM_003214.3	TEAD3	NP_003205.2	ILMN_1814002	0000020717	S	2867	GCTGTGATGGGTTATATCATAAATGCAGCTTGGGGTTGGAGCAGGGGCCC	6	-	35549426-35549475	6p21.31c	Homo sapiens TEA domain family member 3 (TEAD3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9148898] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 9148898] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9148898] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	TEF-5; TEF5; TEAD5; ETFR-1; DTEF-1	TEF-5; TEF5; TEAD5; ETFR-1; DTEF-1
Homo sapiens	RefSeq	NM_173491.1	ILMN_29000	LSM11	NM_173491.2	NM_173491.2		134353	142357575	NM_173491.2	LSM11	NP_775762.1	ILMN_1702698	0000940221	S	2492	GGTGAGCAGACTTAACCCCTCCGTGCCTCAGCTTTTTCCCCACAGACACC	5	+	157116255-157116304	5q33.3b	Homo sapiens LSM11, U7 small nuclear RNA associated (LSM11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ38273	FLJ38273
Homo sapiens	RefSeq	NM_006014.2	ILMN_1071	LAGE3	NM_006014.3	NM_006014.3		8270	110349722	NM_006014.3	LAGE3	NP_006005.2	ILMN_1708151	0001240482	S	656	TCGTCCGCTGGAAAGCTGAAGACTGTCGCCTGCTCCGAATTTCCGTCATC	X	-	153706351-153706397:153706622-153706624	Xq28g	Homo sapiens L antigen family, member 3 (LAGE3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CVG5; ITBA2; ESO3; DXS9879E; DXS9951E	CVG5; ITBA2; ESO3; DXS9951E
Homo sapiens	RefSeq	NM_015939.3	ILMN_29842	TRMT6	NM_015939.3	NM_015939.3		51605	29244922	NM_015939.3	TRMT6	NP_057023.2	ILMN_1765085	0004060280	S	1953	CAACGTAACTAAAACATGGCGGGTACCGAAAGGAGGGCAATTCATGGAAG	20	-	5918794-5918843	20p12.3c	Homo sapiens tRNA methyltransferase 6 homolog (S. cerevisiae) (TRMT6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16043508] [evidence IPI]	GCD10; MGC5029; Gcd10p; CGI-09	GCD10; MGC5029; Gcd10p; CGI-09
Homo sapiens	RefSeq	XR_040466.1	ILMN_335362	LOC283922	XR_040466.1	XR_040466.1		283922	169209452	XR_040466.1	LOC283922		ILMN_3199507	0004260491	A	1198	ACAGGGGACTGGGATCACTTTGAGCCTCTGTTGAGTTCCCTTCTGAGGAG				16q22.3c	PREDICTED: Homo sapiens misc_RNA (LOC283922), miscRNA.					
Homo sapiens	RefSeq	XM_936850.1	ILMN_41629	LOC647785	XM_936850.1	XM_936850.1		647785	88952931	XM_936850.1	LOC647785	XP_941943.1	ILMN_1793463	0003190482	S	613	CAACCACGCTCCCTAGATGAGCCACGCACCTCTGGCCTAACAACAATCAC					PREDICTED: Homo sapiens hypothetical protein LOC647785 (LOC647785), mRNA.					
Homo sapiens	RefSeq	NM_138765.2	ILMN_11763	BAX	NM_138765.2	NM_138765.2		581	34335125	NM_138765.2	BAX	NP_620120.1	ILMN_2321064	0003520092	A	467	TCAGAACCATCATGGGCTGGACATTGGACTTCCTCCGGGAGCGGCTGTTG	19	+	54155907-54155956	19q13.33a	Homo sapiens BCL2-associated X protein (BAX), transcript variant sigma, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11912183] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 11136736] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11912183] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10629050] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any constituent part of cytosol, that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 44445] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The non-specific expansion of T cell populations within a whole or part of an organism to reach to a total number of T cells which will then remain stable over time in the absence of an external stimulus [goid 1777] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IEA]; The non-specific expansion of B cell populations within a whole or part of an organism to reach to a total number of B cells which will then remain stable over time in the absence of an external stimulus [goid 2358] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11912183] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 11912183] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]; The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA [goid 30264] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 9111042] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 9111042] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [pmid 15637643] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Programmed cell death that occurs in the developing retina [goid 46666] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9111042] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16608847] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9111042] [evidence IPI]; Interacting selectively with the BH3 domain of a protein of the Bcl-2 family. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death [goid 51434] [evidence IEA]	Bax zeta	Bax zeta
Homo sapiens	RefSeq	NM_003315.1	ILMN_19727	DNAJC7	NM_003315.1	NM_003315.1		7266	4507712	NM_003315.1	DNAJC7	NP_003306.1	ILMN_1663616	0003290037	S	1330	CTCGCTATGACAGTGGACAGGACCTAGATGAGGAGGGCATGAATATGGGT	17	-	37387399-37387448	17q21.2b	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 7 (DNAJC7), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 8836031] [evidence TAS]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	TTC2; TPR2; DANJC7	TTC2; TPR2; DANJC7
Homo sapiens	RefSeq	NR_003683.1	ILMN_338206	ALMS1P	NR_003683.1	NR_003683.1		200420	154759269	NR_003683.1	ALMS1P		ILMN_3237132	0007210050	S	1772	CAGAATGTAGAACAGGGCTTTCCGGGGGCTGGAGGAGAAGACAAGGAGTT	2	+	73765889-73765938	2p13.2a	Homo sapiens Alstrom syndrome 1 pseudogene (ALMS1P), non-coding RNA.				ALMS1L	ALMS1L
Homo sapiens	RefSeq	XR_016132.1	ILMN_165879	LOC642661	XR_016132.1	XR_016132.1		642661	113424509	XR_016132.1	LOC642661		ILMN_3237209	0003800577	S	1703	GCCAGCACAAGGATGCAGGATACCAGCGTCTCCTTCAGGTACCAGCTGGA	14	-	18789711-18789760	14q11.1d	PREDICTED: Homo sapiens misc_RNA (LOC642661), miscRNA.					
Homo sapiens	RefSeq	XM_943884.1	ILMN_139135	PARP8	XM_943884.1	XM_943884.1		79668	88987735	XM_943884.1	PARP8	XP_948977.1	ILMN_1752791	0000240040	I	1873	CACTCTGCCCATGCATGTTTTTACCTGTGGAGAGAGGCAACATTTACCAC				5q11.1d	PREDICTED: Homo sapiens poly (ADP-ribose) polymerase family, member 8, transcript variant 3 (PARP8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Homo sapiens	RefSeq	NM_021642.2	ILMN_173573	FCGR2A	NM_021642.2	NM_021642.2		2212	50511935	NM_021642.2	FCGR2A	NP_067674.2	ILMN_2289849	0000450762	I	1987	CCCCTTGGGGAAGACGAAGGGATGCTGCAGTTCCAAAAGAGAAGGACTCT	1	+	159755560-159755609	1q23.3a	Homo sapiens Fc fragment of IgG, low affinity IIa, receptor (CD32) (FCGR2A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2139735] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17785206] [evidence IPI]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	FCGR2A1; CDw32; CD32A; CD32; FcGR; FCG2; IGFR2; FCGR2; MGC30032; MGC23887	CDw32; FcGR; IGFR2; FCGR2A1; CD32A; CD32; FCG2; FCGR2; MGC30032; MGC23887
Homo sapiens	RefSeq	NM_173568.2	ILMN_167641	UMODL1	NM_173568.3	NM_173568.3		89766	145580581	NM_173568.3	UMODL1	NP_775839.3	ILMN_1665246	0006860039	I	2161	GCGAGCCCCAGCCATAGGAACACTATCGGGGTGATAGGCACCACCTCCTC	21	+	42404562-42404611	21q22.3b	Homo sapiens uromodulin-like 1 (UMODL1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]		
Homo sapiens	RefSeq	XM_942813.1	ILMN_37051	LOC647456	XM_942813.1	XM_942813.1		647456	89061371	XM_942813.1	LOC647456	XP_947906.1	ILMN_1757172	0001300619	A	399	CTGGGAGACCCTAGCGGGGGCGGGGGCGAAGAAGATTTATTCCAGTGAAA					PREDICTED: Homo sapiens hypothetical protein LOC647455, transcript variant 2 (LOC647456), mRNA.					
Homo sapiens	RefSeq	NM_033549.3	ILMN_27834	TRIM41	NM_033549.3	NM_033549.3		90933	42516571	NM_033549.3	TRIM41	NP_291027.3	ILMN_1813027	0004070397	I	3055	CATTTGGGGAGGCAGGCTGGGCCAAAGGGTAGAGCTGGGTAATAAATGTC	5	+	180594849-180594898	5q35.3g	Homo sapiens tripartite motif-containing 41 (TRIM41), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17893151] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RINCK; MGC31991; MGC1127	RINCK; MGC31991; MGC1127
Homo sapiens	RefSeq	NM_024623.1	ILMN_19071	OGFOD2	NM_024623.1	NM_024623.1		79676	13375845	NM_024623.1	OGFOD2	NP_078899.1	ILMN_1704019	0006350128	S	1720	GGCTCCTGGATGAGGGGGCCAGAGAGGAGTGAATAACTTCCCAGACACTT	12	+	122030181-122030230	12q24.31d	Homo sapiens 2-oxoglutarate and iron-dependent oxygenase domain containing 2 (OGFOD2), mRNA.		The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686H15154; MGC120436; MGC120434; FLJ13491; FLJ37501	DKFZp686H15154; MGC120436; MGC120434; FLJ13491; FLJ37501
Homo sapiens	RefSeq	XR_000221.3	ILMN_16073	LOC374491	NR_002815.1	NR_002815.1		374491	84872100	NR_002815.1	LOC374491		ILMN_1673969	0001780253	A	1454	AAGAACCGGAACTATGATTTGTGCCTTCCTTATTGCCTCCGAAATATTTT	13	+	24053799-24053848	13q12.12b	Homo sapiens TPTE and PTEN homologous inositol lipid phosphatase pseudogene (LOC374491), non-coding RNA. XR_001339 XR_001340 XR_001341					
Homo sapiens	RefSeq	NR_002815.1	ILMN_16073	LOC374491	NR_002815.1	NR_002815.1		374491	84872100	NR_002815.1	LOC374491		ILMN_2183424	0005220601	S	2527	GACTTCCAATGACGTAGCTGGATCCGATTAAGTATAGTTTCCCCTTCCCC	13	+	24069625-24069674	13q12.12b	Homo sapiens TPTE and PTEN homologous inositol lipid phosphatase pseudogene (LOC374491), non-coding RNA. XR_001339 XR_001340 XR_001341					
Homo sapiens	RefSeq	XM_001713985.1	ILMN_342110	LOC339562	XM_001713985.1	XM_001713985.1		339562	169163329	XM_001713985.1	LOC339562	XP_001714037.1	ILMN_3241333	0002490022	S	1729	CCGGCCGCTGTGGCTTTTTGCCGCCGCGGCTTTTTGTCGCCGCGGCTTTT	2	+	91034751-91034800	2p11.1d	PREDICTED: Homo sapiens similar to hCG1742442 (LOC339562), mRNA.					
Homo sapiens	RefSeq	NM_006561.2	ILMN_21057	CUGBP2	NM_006561.2	NM_006561.2		10659	68303638	NM_006561.2	CUGBP2	NP_006552.2	ILMN_2400947	0005390575	A	7318	CATGGACCACCTTGGGATACCGCAGCACCATCAACATCCGCCTTGCTGAT	10	+	11418045-11418094	10p14b-p14a	Homo sapiens CUG triplet repeat, RNA binding protein 2 (CUGBP2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9887331] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9887331] [evidence TAS]	BRUNOL3; ETR-3; NAPOR	BRUNOL3; ETR-3; NAPOR
Homo sapiens	RefSeq	XM_929598.1	ILMN_166059	LOC644623	XR_017466.1	XR_017466.1		644623	113424176	XR_017466.1	LOC644623		ILMN_1788605	0001580040	I	879	CCATGACATTCCCCACACAAGTGAACTGACAGGAGGAACCAAGGAGGCAC	13	-	51780394-51780435:51781332-51781339	13q14.3d	PREDICTED: Homo sapiens similar to transmembrane phosphatase with tensin homology isoform beta (LOC644623), mRNA.					
Homo sapiens	RefSeq	XR_001342.1	ILMN_166059	LOC644623	XR_017466.1	XR_017466.1		644623	113424176	XR_017466.1	LOC644623		ILMN_1735484	0004850717	I	1	ATGAAGGAACCAGCGGAGGGACCTCCGGGAGGAGGCGCTGCCCAGCGAGC	13	-	51806435-51806484	13q14.3d	PREDICTED: Homo sapiens similar to transmembrane phosphatase with tensin homology isoform beta (LOC644623), mRNA.					
Homo sapiens	RefSeq	XM_933800.1	ILMN_166059	LOC644623	XR_017466.1	XR_017466.1		644623	113424176	XR_017466.1	LOC644623		ILMN_1681755	0005420039	A	2296	TTATCTACAAAGAAATGAATTGGATAATCTTCATAAACAAAAAACATGGA	13	-	51691713-51691762	13q14.3d	PREDICTED: Homo sapiens similar to transmembrane phosphatase with tensin homology isoform beta (LOC644623), mRNA.					
Homo sapiens	RefSeq	XR_000202.4	ILMN_166059	LOC644623	XR_017466.1	XR_017466.1		644623	113424176	XR_017466.1	LOC644623		ILMN_1759879	0004220309	S	1062	TGGAGTTTTCCTGATCTTGTTGGATGTGGCTCTGATCTTTGCTGACCTAA	13	-	51762063-51762112	13q14.3d	PREDICTED: Homo sapiens similar to transmembrane phosphatase with tensin homology isoform beta (LOC644623), mRNA.					
Homo sapiens	RefSeq	NM_018342.2	ILMN_24245	TMEM144	NM_018342.3	NM_018342.3		55314	141801688	NM_018342.3	TMEM144	NP_060812.2	ILMN_1708110	0001340026	S	2811	TTGTAGATTGGAGAACACCATGTAAGAGCTACTAAGCTCACCACCTTCCC	4	+	159395657-159395706	4q32.1d-q32.1e	Homo sapiens transmembrane protein 144 (TMEM144), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ11155	FLJ11155
Homo sapiens	RefSeq	NM_153216.1	ILMN_28829	POU5F2	NM_153216.1	NM_153216.1		134187	23463325	NM_153216.1	POU5F2	NP_694948.1	ILMN_1815649	0006330523	S	977	GTAGCCCACTCCTCTGCCCCAGCCACCACTCTGGGCCTCCTCAGATTTTA	5	-	93102039-93102088	5q15b	Homo sapiens POU domain class 5, transcription factor 2 (POU5F2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	DKFZp686P02123; SPRM-1; FLJ25680	DKFZp686P02123; SPRM-1; FLJ25680
Homo sapiens	RefSeq	NR_003074.1	ILMN_178041	SNORD92	NR_003074.1	NR_003074.1		692209	96974960	NR_003074.1	SNORD92		ILMN_3245759	0004070703	S	39	CACTGAGAGTAAAATGAGGACCTACAATTCCTTGGCTGTGTCTGAGCACC	2	+	28990070-28990119	2p23.2a	Homo sapiens small nucleolar RNA, C/D box 92 (SNORD92), small nucleolar RNA.				HBII-316	HBII-316
Homo sapiens	RefSeq	NM_001002844.1	ILMN_13581	ZNF280D	NM_001002844.1	NM_001002844.1		54816	50811874	NM_001002844.1	ZNF280D	NP_001002844.1	ILMN_1736555	0000770605	I	1523	AATGGTGGATAAGCTGCTGGTGCCTTAGTGTGAATCAAGGTAGTGCCACC	15	-	56992149-56992198	15q21.3d	Homo sapiens zinc finger protein 280D (ZNF280D), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF634; MGC61687; MGC21637; SUHW4	ZNF634; MGC61687; MGC21637; SUHW4
Homo sapiens	RefSeq	XM_932852.1	ILMN_32015	LOC643576	XM_932852.1	XM_932852.1		643576	89035673	XM_932852.1	LOC643576	XP_937945.1	ILMN_1651584	0005360538	A	435	TCCTTTCTACAGCAACATCAGTAAGGTCTCTCTGAAGAGGCTATCATGGA	12	+	102949076-102949099:102949281-102949306	12q23.3a	PREDICTED: Homo sapiens similar to Phosphoglycerate mutase 1 (Phosphoglycerate mutase isozyme B) (PGAM-B) (BPG-dependent PGAM 1), transcript variant 3 (LOC643576), mRNA.					
Homo sapiens	RefSeq	XM_939368.1	ILMN_37027	LOC654103	XM_939368.1	XM_939368.1		654103	89028579	XM_939368.1	LOC654103	XP_944461.1	ILMN_1802808	0007320707	S	2555	ACTGCTGCTTCCTACCTGCAAGACGCACAATGTATGTTTCAAGGGTGAGC					PREDICTED: Homo sapiens similar to solute carrier family 25, member 37 (LOC654103), mRNA.					
Homo sapiens	RefSeq	NM_006329.2	ILMN_29187	FBLN5	NM_006329.2	NM_006329.2		10516	19743802	NM_006329.2	FBLN5	NP_006320.2	ILMN_1664176	0005690639	S	1882	AGAATGAGAGCGACACAGACGTTAGGCATTTCCTGCTGAACGTTTCCCCG	14	-	91406198-91406247	14q32.12a	Homo sapiens fibulin 5 (FBLN5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10428823] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10428823] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 10428823] [evidence TAS]	Interacting selectively with an integrin [goid 5178] [pmid 10428823] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARMD3; UP50; DANCE; FLJ90059; EVEC	ARMD3; UP50; DANCE; FLJ90059; EVEC
Homo sapiens	RefSeq	NM_006329.2	ILMN_29187	FBLN5	NM_006329.2	NM_006329.2		10516	19743802	NM_006329.2	FBLN5	NP_006320.2	ILMN_2223941	0004670441	S	2230	GCTGGCGGGGAACCCTGGGAGTAGCTAGTTTGCTTTTTGCGTACACAGAG	14	-	91405850-91405899	14q32.12a	Homo sapiens fibulin 5 (FBLN5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10428823] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10428823] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 10428823] [evidence TAS]	Interacting selectively with an integrin [goid 5178] [pmid 10428823] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARMD3; UP50; DANCE; FLJ90059; EVEC	ARMD3; UP50; DANCE; FLJ90059; EVEC
Homo sapiens	RefSeq	NM_001079514.1	ILMN_172742	UBN1	NM_001079514.1	NM_001079514.1		29855	118572602	NM_001079514.1	UBN1	NP_001072982.1	ILMN_2399503	0007160433	A	5828	TCTGAGCACTTACCGGGCGTGACCGTTTCTTAGGTGTGAGAGGGGCTGTG	16	+	4872218-4872267	16p13.3b	Homo sapiens ubinuclein 1 (UBN1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10725330] [evidence TAS]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10725330] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10725330] [evidence TAS]	VT4; VT	VT4; VT
Homo sapiens	RefSeq	NM_001079514.1	ILMN_172742	UBN1	NM_001079514.1	NM_001079514.1		29855	118572602	NM_001079514.1	UBN1	NP_001072982.1	ILMN_2290089	0003710041	I	249	GAGGACCGCCGCGGGGGGACGTCTGCGGCCCGCGTCGGCGCTGGGGACAA	16	+	4838161-4838210	16p13.3b	Homo sapiens ubinuclein 1 (UBN1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10725330] [evidence TAS]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10725330] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10725330] [evidence TAS]	VT4; VT	VT4; VT
Homo sapiens	RefSeq	NM_025008.2	ILMN_23416	ADAMTSL4	NM_025008.3	NM_025008.3		54507	83281434	NM_025008.3	ADAMTSL4	NP_079284.2	ILMN_1762294	0000780678	I	2831	GGGTAACCACGCCCAGGACACCTCAGCCTTTCCAGCATAGCTCAATAAAC	1	+	148797785-148797824:148797825-148797834	1q21.2b-q21.2c	Homo sapiens ADAMTS-like 4 (ADAMTSL4), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 16364318] [evidence IDA]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 16364318] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TSRC1	DKFZP434K1772; PP12585; FLJ13544; PP9445; RP11-54A4.3; UNQ2803; PP1396
Homo sapiens	RefSeq	NM_025008.2	ILMN_23416	ADAMTSL4	NM_025008.3	NM_025008.3		54507	83281434	NM_025008.3	ADAMTSL4	NP_079284.2	ILMN_1687035	0000010286	A	2729	CAGCAGAGAGGCCTGTGACATGGGGCCCTGTACTACTGCCTGGTTCCACA	1	+	148797683-148797732	1q21.2b-q21.2c	Homo sapiens ADAMTS-like 4 (ADAMTSL4), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 16364318] [evidence IDA]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 16364318] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TSRC1	DKFZP434K1772; PP12585; FLJ13544; PP9445; RP11-54A4.3; UNQ2803; PP1396
Homo sapiens	Unigene	Hs.164406	ILMN_79982	HS.164406	Hs.164406		Hs.164406		28364266	CB242622			ILMN_1895935	0001260537	S	348	GTTTGGAATGAGTGGCCTTAGGCGTAAGTGGTCACAGGATTGGAGGAAGG	10	-	103872292-103872341		UI-CF-FN0-afs-c-14-0-UI.s1 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-afs-c-14-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014377.1	ILMN_168524	DNAJC2	NM_014377.1	NM_014377.1		27000	94538369	NM_014377.1	DNAJC2	NP_055192.1	ILMN_2174296	0001770142	S	1545	CGTATGCGACAAGCATCTAAGAACACAGAGAAATCAACTGGTGGAGGTGG	7	-	102957360-102957409	7q22.1f	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 2 (DNAJC2), transcript variant 1, mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MPP11; MPHOSPH11; ZUO1; DNAJC2	MPP11; MPHOSPH11; ZUO1; DNAJC2
Homo sapiens	RefSeq	NM_173616.1	ILMN_183260	FLJ35894	XM_001131199.1	XM_001131199.1		283847	113426471	XM_001131199.1	FLJ35894	XP_001131199.1	ILMN_1697634	0006560703	S	1615	ACCGTTAAAGAGCGCAAATCCAGTCCATGCTTGTTACAGGGAGAGTGAGC				16q22.1a	PREDICTED: Homo sapiens hypothetical protein FLJ35894 (FLJ35894), mRNA.					
Homo sapiens	RefSeq	XM_001718078.1	ILMN_346723	LOC100130953	XM_001718078.1	XM_001718078.1		100130953	169207048	XM_001718078.1	LOC100130953	XP_001718130.1	ILMN_3266517	0004920482	M	292	CCACATCTCTGGGCTCCAGCTTGGCAAAGGCAACTGAAGGAGCTCCTCAC	14	-	61614119-61614140:61617568-61617595	14q23.2a	PREDICTED: Homo sapiens hypothetical protein LOC100130953 (LOC100130953), mRNA.					
Homo sapiens	RefSeq	NM_173653.1	ILMN_20716	SLC9A9	NM_173653.1	NM_173653.1		285195	27734934	NM_173653.1	SLC9A9	NP_775924.1	ILMN_1758315	0000510128	S	3223	GCTCCAGGCCTAGGTGCCCAGGCTATGATGAGTCTGCTTTTGAAGGAGGT	3	-	144467024-144467073	3q24a	Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 9 (SLC9A9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]; Organelle consisting of networks of 60nm tubules organized around the microtubule organizing centre in some cell types. They transport receptors from late endosomes back to the plasma membrane for recycling and are also involved in membrane trafficking [goid 55037] [pmid 15522866] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NHE9; Nbla00118; FLJ35613	NHE9; Nbla00118; FLJ35613
Homo sapiens	Unigene	Hs.539385	ILMN_104485	HS.539385	Hs.539385		Hs.539385		3644985	AI139013			ILMN_1880310	0000780026	S	112	TTCTCCTTGAGAGCAGGGGCTGGATCGTATTTGGTGGGCCTCTACCGGGT	12	-	46977297-46977346		qd83h02.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1736115 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001726744.1	ILMN_351277	LOC100128554	XM_001726744.1	XM_001726744.1		100128554	169205529	XM_001726744.1	LOC100128554	XP_001726796.1	ILMN_3271849	0002340333	M	418	GCCGACTTTCTGCACGTGTTCACTTTGAGGCTGCATTGTGGGCCTGCAAG				12q24.32a	PREDICTED: Homo sapiens hypothetical protein LOC100128554 (LOC100128554), mRNA.					
Homo sapiens	RefSeq	XM_926863.1	ILMN_40155	LOC643563	XM_926863.2	XM_926863.2		643563	113429978	XM_926863.2	LOC643563	XP_931956.2	ILMN_1661643	0006860053	S	8	AGGAAAAGGCTCATATCAGCATCACCGTCATTGGACATCAAGATTCGGGC	X	+	97531171-97531220	Xq21.33d	PREDICTED: Homo sapiens similar to EEF1A1 protein (LOC643563), mRNA.					
Homo sapiens	RefSeq	XM_938721.1	ILMN_181906	LOC731283	XM_001129099.1	XM_001129099.1		731283	113411959	XM_001129099.1	LOC731283	XP_001129099.1	ILMN_1663988	0003170619	S	610	GAGGAGCCGCAGAGGAGTGCCAGCCTGGCCCAGGTGAAAGCCATGCTCCG					PREDICTED: Homo sapiens similar to ciliary rootlet coiled-coil, rootletin (LOC731283), mRNA.					
Homo sapiens	RefSeq	NM_178127.2	ILMN_15984	ANGPTL5	NM_178127.2	NM_178127.2		253935	31342398	NM_178127.2	ANGPTL5	NP_835228.1	ILMN_2166696	0002360066	S	1532	CCCTGCATGCCTGGTCAATGGTCAGTCTGTGAAGAGCTGCAGTCACCTCC	11	-	101267403-101267452	11q22.1d	Homo sapiens angiopoietin-like 5 (ANGPTL5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Homo sapiens	RefSeq	NM_007185.3	ILMN_8091	TNRC4	NM_007185.3	NM_007185.3		11189	71164893	NM_007185.3	TNRC4	NP_009116.3	ILMN_1681234	0000580368	S	2922	GGCCCGGACGCTGCCATCTCTCTTTCTGGGAGTTTAGACAATGTTGCCCT	1	-	151675155-151675204	1q21.3a	Homo sapiens trinucleotide repeat containing 4 (TNRC4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11158314] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 11158314] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 11158314] [evidence NAS]	CAGH4; BRUNOL1; CELF3; MGC57297; ERDA4	CAGH4; BRUNOL1; CELF3; MGC57297; ERDA4
Homo sapiens	RefSeq	XM_498284.2	ILMN_41777	LOC442388	XM_937916.1	XM_937916.1		442388	89028730	XM_937916.1	LOC442388	XP_943009.1	ILMN_1660985	0001770349	A	713	CAAGCAAGTATCCGTTTCTGTTACCAATTCTGGAGCAGGAGTATGTGGCC				8q12.1b	PREDICTED: Homo sapiens similar to RIKEN cDNA 4833413O15 gene (LOC442388), mRNA.					
Homo sapiens	Unigene	Hs.128892	ILMN_76712	HS.128892	Hs.128892		Hs.128892		27844023	BX099310			ILMN_1870085	0004900082	S	384	GGCCAGTGTGGATAAGGCAGTAAGGTTTTGAGTCTGAGGAGATGGCTGGG	6	+	132461954-132462003		BX099310 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998P164537, mRNA sequence					
Homo sapiens	RefSeq	XM_940253.1	ILMN_36168	CLDN22	XM_940253.1	XM_940253.1		53842	88981331	XM_940253.1	CLDN22	XP_945346.1	ILMN_1654759	0001440400	A	690	CAGGAGACGCTTGCTCAACACTGGATTTGGTAGGATGTCCCGCTCTAGTC				4q35.1c	PREDICTED: Homo sapiens claudin 22 (CLDN22), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]		
Homo sapiens	RefSeq	NM_016132.2	ILMN_8872	MYEF2	NM_016132.3	NM_016132.3		50804	154146212	NM_016132.3	MYEF2	NP_057216.2	ILMN_1710329	0000520608	S	4181	GTGATATACCTTAATTTAGTGGGCTTTGGCAGGGCGGGGGAGGGGGAACG	15	-	48432801-48432850	15q21.1c	Homo sapiens myelin expression factor 2 (MYEF2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ11213; KIAA1341; MST156; MEF-2; MSTP156; HsT18564; MGC87325	FLJ11213; KIAA1341; MST156; MEF-2; MSTP156; HsT18564; MGC87325
Homo sapiens	RefSeq	NM_005984.1	ILMN_28181	SLC25A1	NM_005984.1	NM_005984.1		6576	21389314	NM_005984.1	SLC25A1	NP_005975.1	ILMN_1813671	0006900440	S	1168	GCATTGTGGCTGTCAAATCCATGTGTCCCCCCTGTGGTCTGTGTGTGACA	22	-	17543460-17543509	22q11.21b	Homo sapiens solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 (SLC25A1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, into, out of or within a mitochondrion [goid 6843] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of citrate, 2-hydroxy-1,2,3-propanetricarboyxlate, from one side of the membrane to the other [goid 15137] [pmid 8666394] [evidence TAS]	SLC20A3; CTP	SLC20A3; CTP
Homo sapiens	RefSeq	NM_022060.2	ILMN_4184	ABHD4	NM_022060.2	NM_022060.2		63874	50658086	NM_022060.2	ABHD4	NP_071343.2	ILMN_1700633	0003120014	S	2224	ACTGGGTGGTTCCCACTGCATGACCCTCTATCCCTGCCATCTGTCCCCAT	14	+	22150820-22150869	14q11.2e	Homo sapiens abhydrolase domain containing 4 (ABHD4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ12816	FLJ12816
Homo sapiens	RefSeq	XM_926769.1	ILMN_165861	LOC643438	XR_015310.1	XR_015310.1		643438	113418837	XR_015310.1	LOC643438		ILMN_1660869	0003180619	S	1	ATGCGGCGGCGTGGTGAAATAGATGCGGCGACCGAGGGGGATGTGGAGCT	7	+	147965225-147965274	7q36.1a	PREDICTED: Homo sapiens misc_RNA (LOC643438), miscRNA.					
Homo sapiens	RefSeq	NM_001001563.1	ILMN_15521	TIMM50	NM_001001563.1	NM_001001563.1		92609	48526508	NM_001001563.1	TIMM50	NP_001001563.1	ILMN_1752229	0003610048	S	2131	TACAACAGCCTTGACCTCCCGGCTCAAGTGATCTCCAAGTGACCCTCCTG	19	+	39981087-39981136	19q13.2a	Homo sapiens translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) (TIMM50), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [pmid 15044455] [evidence IPI]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 16008839] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 15044455] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [pmid 15044455] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 15044455] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 15044455] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15044455] [evidence IPI]; Interacting selectively with any complex of RNA and protein [goid 43021] [pmid 16008839] [evidence IDA]	TIM50L; MGC102733	TIM50L; MGC102733
Homo sapiens	RefSeq	NM_173087.1	ILMN_8100	CAPN3	NM_173087.1	NM_173087.1		825	27765073	NM_173087.1	CAPN3	NP_775110.1	ILMN_2332691	0004180762	A	2647	CCCCTACCCATCCTTGATCGGTCATGCCTAGCCTGACCCTTTAGTAAAGC	15	+	40491414-40491463	15q15.1d	Homo sapiens calpain 3, (p94) (CAPN3), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 7720071] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9642272] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9642272] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 7720071] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [pmid 9642272] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 7720071] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	CANP3; MGC14344; p94; LGMD2; MGC10767; CANPL3; MGC11121; MGC4403; LGMD2A; nCL-1	CANP3; MGC14344; p94; LGMD2; MGC10767; CANPL3; MGC11121; MGC4403; LGMD2A; nCL-1
Homo sapiens	RefSeq	NM_139289.1	ILMN_10770	AKAP4	NM_139289.1	NM_139289.1		8852	21493038	NM_139289.1	AKAP4	NP_647450.1	ILMN_1734794	0007100575	A	2510	CCTCAGGTTTCAGCTAAAGCAGCAGAGAAGGGGTACAGTGTAGGAGGTCT	X	-	49955705-49955754	Xp11.22c	Homo sapiens A kinase (PRKA) anchor protein 4 (AKAP4), transcript variant 2, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9822690] [evidence TAS]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [pmid 9822690] [evidence NAS]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [pmid 9822690] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9822690] [evidence TAS]; The union of male and female gametes to form a zygote [goid 7338] [pmid 9822690] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [pmid 9822690] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]	FSC1; HI; p82; hAKAP82; AKAP82	FSC1; HI; p82; hAKAP82; AKAP82
Homo sapiens	RefSeq	NM_139289.1	ILMN_10770	AKAP4	NM_139289.1	NM_139289.1		8852	21493038	NM_139289.1	AKAP4	NP_647450.1	ILMN_2253207	0005560450	I	38	GCACTTCTCAGTTCCATCTAAAGGGGCACATCTCCCTTCTGGGTGTCACG	X	-	49964917-49964966	Xp11.22c	Homo sapiens A kinase (PRKA) anchor protein 4 (AKAP4), transcript variant 2, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9822690] [evidence TAS]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [pmid 9822690] [evidence NAS]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [pmid 9822690] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9822690] [evidence TAS]; The union of male and female gametes to form a zygote [goid 7338] [pmid 9822690] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [pmid 9822690] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence ISS]	FSC1; HI; p82; hAKAP82; AKAP82	FSC1; HI; p82; hAKAP82; AKAP82
Homo sapiens	RefSeq	NM_004901.1	ILMN_19012	ENTPD4	NM_004901.2	NM_004901.2		9583	141802192	NM_004901.2	ENTPD4	NP_004892.1	ILMN_1806304	0002900224	S	1850	TCTACAACCACTACCTGTTCTCTGGCTGCTTCCTGGTGGTGCTGCTGGCC	8	-	23346503-23346552	8p21.3a	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 4 (ENTPD4), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 9556635] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of UDP, uridine (5'-)diphosphate [goid 6256] [pmid 9556635] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: UDP + H2O = UMP + phosphate [goid 45134] [pmid 9556635] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0392; NTPDase-4; UDPase; LYSAL1; LALP70; LAP70	KIAA0392; NTPDase-4; UDPase; LYSAL1; LALP70; LAP70
Homo sapiens	RefSeq	NM_080861.3	ILMN_20059	SPSB3	NM_080861.3	NM_080861.3		90864	38679885	NM_080861.3	SPSB3	NP_543137.2	ILMN_1682864	0002850433	S	1417	TGGAGCCCGCGTTGCTGTTCCCACAGGGCCTCGGTTTTTCCTAACTTGCT	16	-	1826790-1826839	16p13.3e	Homo sapiens splA/ryanodine receptor domain and SOCS box containing 3 (SPSB3), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SSB3; C16orf31	SSB3; C16orf31
Homo sapiens	RefSeq	NM_002763.3	ILMN_177185	PROX1	NM_002763.3	NM_002763.3		5629	34147628	NM_002763.3	PROX1	NP_002754.2	ILMN_1752622	0005360689	S	2845	GGCGGTTGGCTGAGGAAAACCCATGACACAGCACAACTCTACAGACAGTG	1	+	212276159-212276208	1q41a	Homo sapiens prospero homeobox 1 (PROX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; The process whose specific outcome is the progression of the lymphatic vasculature over time, from its formation to the mature structure [goid 1945] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [pmid 10080188] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 8812486] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 45446] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 10080188] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	NM_005491.1	ILMN_17288	MAMLD1	NM_005491.2	NM_005491.2		10046	120952763	NM_005491.2	MAMLD1	NP_005482.2	ILMN_1680856	0002320343	S	4269	GCTTGTGTGCACCCTCGTGGGGTTAAGGCGAGCTGTTCCTGGTTTAAAGC	X	+	149432768-149432817	Xq28c	Homo sapiens mastermind-like domain containing 1 (MAMLD1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CXorf6; F18; CG1	CG1; F18
Homo sapiens	RefSeq	NM_003714.2	ILMN_28725	STC2	NM_003714.2	NM_003714.2		8614	61676085	NM_003714.2	STC2	NP_003705.1	ILMN_1691884	0001170170	S	5175	GTGGCCACTTCCTAAGGAGGAACAACCCCGTCTGATCTCAGAATTGGCAC	5	-	172741844-172741893	5q35.2a	Homo sapiens stanniocalcin 2 (STC2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9753616] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9753616] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 9753616] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 9723890] [evidence TAS]	STCRP; STC-2	STCRP; STC-2
Homo sapiens	RefSeq	NM_145306.1	ILMN_13661	C10ORF35	NM_145306.2	NM_145306.2		219738	149588739	NM_145306.2	C10orf35	NP_660349.1	ILMN_1662470	0002510253	S	864	ACATGTTCCGATGCCTGTGGAAGACATGCCGACGTCTCCTCTGCCTAGGG	10	+	71063149-71063198	10q21.3e	Homo sapiens chromosome 10 open reading frame 35 (C10orf35), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_006217.3	ILMN_1973	SERPINI2	NM_006217.3	NM_006217.3		5276	59814587	NM_006217.3	SERPINI2	NP_006208.1	ILMN_1726225	0002680370	S	1073	AGCTGCAACATCAACTGGCATACACATCCCTGTGATCATGAGTCTGGCTC	3	-	168646930-168646963:168649798-168649813	3q26.1f	Homo sapiens serpin peptidase inhibitor, clade I (pancpin), member 2 (SERPINI2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 10097100] [evidence TAS]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 10097100] [evidence TAS]	PI14; PANCPIN; TSA2004; MEPI	PI14; PANCPIN; TSA2004; MEPI
Homo sapiens	RefSeq	XM_001717230.1	ILMN_338728	LOC100132107	XM_001717230.1	XM_001717230.1		100132107	169172717	XM_001717230.1	LOC100132107	XP_001717282.1	ILMN_3238694	0002260392	S	812	CCTTGGCCCTGGTTCATTCTAGTTTATACAGTCATCAGGTAGAAGCCCTG	8	-	23800145-23800194	8p21.2d	PREDICTED: Homo sapiens hypothetical LOC100132107 (LOC100132107), mRNA.					
Homo sapiens	RefSeq	XR_038242.1	ILMN_348643	LOC100133572	XR_038242.1	XR_038242.1		100133572	169218133	XR_038242.1	LOC100133572		ILMN_3246470	0005390601	S	784	TATGGAACAGGCATTGGCATGTACCTGACTTCAGCTGTGTCACCACCCCC					PREDICTED: Homo sapiens misc_RNA (LOC100133572), miscRNA.					
Homo sapiens	Unigene	Hs.554595	ILMN_112048	HS.554595	Hs.554595		Hs.554595		34888963	CF552129			ILMN_1882485	0004290167	S	233	CATCCCCAAGCATAGGAAAGAATTACTCATACCTCCCCTTCCTTCAGCAC	15	+	37189989-37190038		AGENCOURT_15609033 NIH_MGC_183 Homo sapiens cDNA clone IMAGE:30530585 5, mRNA sequence					
Homo sapiens	RefSeq	XM_932159.1	ILMN_42339	LOC653472	XM_932159.1	XM_932159.1		653472	89038268	XM_932159.1	LOC653472	XP_937252.1	ILMN_1811335	0004610068	S	271	AAGAATACCTGCTCAGCTCCAGAGACACGTAAAGGGACAGAGATTGGGGG	15	-	32487155-32487204		PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a, 8B (LOC653472), mRNA.					
Homo sapiens	RefSeq	NM_032484.3	ILMN_167980	GHDC	NM_032484.3	NM_032484.3		84514	31543054	NM_032484.3	GHDC	NP_115873.1	ILMN_1746378	0002030754	S	2296	GCACACCGATGGTTTCCTGTATCACAGCCCAAAGAGGTTCTCTGGTGGCC	17	-	37594936-37594985	17q21.2b	Homo sapiens GH3 domain containing (GHDC), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D11LGP1; LGP1	D11LGP1; LGP1
Homo sapiens	RefSeq	NM_203303.1	ILMN_25783	ZCCHC13	NM_203303.2	NM_203303.2		389874	146219854	NM_203303.2	ZCCHC13	NP_976048.1	ILMN_1658074	0001190093	S	535	CGCTGCGGCAAATCCCGACATCTAGCCAAGGAATGTCCCAGTGAGGTTAC	X	+	73441284-73441327:73441328-73441333	Xq13.2c	Homo sapiens zinc finger, CCHC domain containing 13 (ZCCHC13), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF9L; Cnbp2	ZNF9L; Cnbp2
Homo sapiens	RefSeq	NM_173728.2	ILMN_19901	ARHGEF15	NM_173728.2	NM_173728.2		22899	32307165	NM_173728.2	ARHGEF15	NP_776089.2	ILMN_1792571	0003610601	S	3897	CATGATACCAGAGGAGGCGAGGGACAGAGACAGCAAGGCAGACAGTGGCT	17	+	8166286-8166335	17p13.1c	Homo sapiens Rho guanine nucleotide exchange factor (GEF) 15 (ARHGEF15), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	MGC44868; FLJ13791; ARGEF15; Vsm-RhoGEF; KIAA0915	MGC44868; FLJ13791; ARGEF15; Vsm-RhoGEF; KIAA0915
Homo sapiens	RefSeq	NM_139201.1	ILMN_14065	GIT2	NM_014776.2	NM_014776.2		9815	21237785	NM_014776.2	GIT2	NP_055591.2	ILMN_1760922	0002810327	A	1135	GGAGACAGCAGGGCAGTTCTCTCTCGGGTTCAAAAGACAATGTGGAGCTC	12	-	108875408-108875422:108882035-108882069	12q24.11c	Homo sapiens G protein-coupled receptor kinase interactor 2 (GIT2), transcript variant 3, mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10942595] [evidence IDA]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 10896954] [evidence TAS]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CAT-2; MGC760; KIAA0148; DKFZp686G01261	CAT-2; MGC760; KIAA0148; DKFZp686G01261
Homo sapiens	RefSeq	NM_014776.2	ILMN_14065	GIT2	NM_014776.2	NM_014776.2		9815	21237785	NM_014776.2	GIT2	NP_055591.2	ILMN_2355776	0004540626	A	1040	CTCATCAACACGAAATCAGGGCAGACAGAAGTTAGCTCGGTTCAACGCCC	12	-	108882115-108882146:108883466-108883483	12q24.11c	Homo sapiens G protein-coupled receptor kinase interactor 2 (GIT2), transcript variant 3, mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10942595] [evidence IDA]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 10896954] [evidence TAS]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CAT-2; MGC760; KIAA0148; DKFZp686G01261	CAT-2; MGC760; KIAA0148; DKFZp686G01261
Homo sapiens	RefSeq	NR_003611.2	ILMN_370342	BMS1P5	NR_003611.2	NR_003611.2		399761	219689089	NR_003611.2	BMS1P5		ILMN_3238183	0001260646	S	3888	TAAAGTCTAGCCAGGTGCAGTGGCTCACGCCTGTAATCCCAGACTTTGGG	10	-	48927670-48927719	10q11.22c	Homo sapiens BMS1 pseudogene 5 (BMS1P5), non-coding RNA.					
Homo sapiens	RefSeq	NM_020880.2	ILMN_16961	ZNF530	NM_020880.2	NM_020880.2		348327	40254939	NM_020880.2	ZNF530	NP_065931.2	ILMN_1761348	0006380167	S	2649	GTGTGCATCAGTCACCACCCCAACATGCTCAGGGAGGCAGAGTTCTTCCA	19	+	62811134-62811183	19q13.43b	Homo sapiens zinc finger protein 530 (ZNF530), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1508	KIAA1508
Homo sapiens	RefSeq	NM_175874.2	ILMN_12303	C12ORF60	NM_175874.2	NM_175874.2		144608	31343594	NM_175874.2	C12orf60	NP_787070.1	ILMN_2234710	0000990162	S	703	GTCACCACATCTGAGAGAACCAGAAGTCCTCCAGGTTCTTCCAAAACCAC	12	+	14867635-14867684	12p12.3e	Homo sapiens chromosome 12 open reading frame 60 (C12orf60), mRNA.				MGC47869	MGC47869
Homo sapiens	RefSeq	NM_175874.2	ILMN_12303	C12ORF60	NM_175874.2	NM_175874.2		144608	31343594	NM_175874.2	C12orf60	NP_787070.1	ILMN_2234709	0002340605	S	480	GGCCATGTGCTCTGTGGTTCAGAAGAGTACCAATGTAGAGGAGTTGCATC	12	+	14867412-14867461	12p12.3e	Homo sapiens chromosome 12 open reading frame 60 (C12orf60), mRNA.				MGC47869	MGC47869
Homo sapiens	RefSeq	XR_016097.1	ILMN_169648	LOC653040	XR_016097.1	XR_016097.1		653040	113422215	XR_016097.1	LOC653040		ILMN_3247975	0004850128	S	1168	TTATGTGGCCCTATTAAGCCCCGCCACTATCTGACCATTATGAGCCCAAG	11	-	77171-77220	11p15.5d	PREDICTED: Homo sapiens misc_RNA (LOC653040), miscRNA.					
Homo sapiens	RefSeq	NM_182947.1	ILMN_8711	GEFT	NM_182947.1	NM_182947.1		115557	33667114	NM_182947.1	GEFT	NP_891992.1	ILMN_2388965	0004050131	A	2185	GGATGAAGATGAGCTGTAACTGGTGAAAACCATGGGGGTGGTGCTGACTC	12	+	56296926-56296944:56296945-56296975	12q13.3b	Homo sapiens RAC/CDC42 exchange factor (GEFT), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	p63RhoGEF	p63RhoGEF
Homo sapiens	Unigene	Hs.90221	ILMN_74129	HS.90221	Hs.90221		Hs.90221		21755139	AK095804			ILMN_1861392	0002760139	S	1772	TGTAGCCCCGCAAGCCGGAGTCTGTGCCCTCCATGACCCTTCTTATCCCT	21	+	34191431-34191480		Homo sapiens cDNA FLJ38485 fis, clone FEBRA2023285					
Homo sapiens	RefSeq	NM_025234.1	ILMN_12961	WDR61	NM_025234.1	NM_025234.1		80349	13376839	NM_025234.1	WDR61	NP_079510.1	ILMN_1665887	0004120403	S	759	TGAGCGGCCATGCCTCCTGGGTGCTGAACGTTGCATTCTGTCCTGATGAC	15	-	78578399-78578448	15q25.1a	Homo sapiens WD repeat domain 61 (WDR61), mRNA.				REC14	REC14
Homo sapiens	RefSeq	XM_943829.1	ILMN_36401	LOC649661	XM_943829.1	XM_943829.1		649661	88952301	XM_943829.1	LOC649661	XP_948922.1	ILMN_1700679	0004830601	S	44	GGGCTTCTCCTGTGTTCACAGGATTTTGTGTAAACACCTCGCAGAGTGAG					PREDICTED: Homo sapiens hypothetical protein LOC649661 (LOC649661), mRNA.					
Homo sapiens	RefSeq	NM_153332.3	ILMN_9945	ERI1	NM_153332.3	NM_153332.3		90459	161621248	NM_153332.3	ERI1	NP_699163.2	ILMN_3245659	0005360398	S	4376	CCACCAACCTGTATATCAAGCCTCCTTGCCCCACAAAGCTTCCAAAGCCC	8	+	8890610-8890659	8p23.1d	Homo sapiens exoribonuclease 1 (ERI1), mRNA.				MGC35395; 3'HEXO	MGC35395; 3'HEXO
Homo sapiens	RefSeq	NR_002716.1	ILMN_4405	RNU2-1	NR_002716.1	NR_002716.1		6066	84871999	NR_002716.1	RNU2-1		ILMN_2057836	0004640082	S	3	CGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAGTATCTGTTCATCAGTT	17	-	31859-31908		Homo sapiens RNA, U2 small nuclear 1 (RNU2-1), non-coding RNA.				U2	U2
Homo sapiens	RefSeq	NM_001504.1	ILMN_2029	CXCR3	NM_001504.1	NM_001504.1		2833	4504098	NM_001504.1	CXCR3	NP_001495.1	ILMN_1797975	0004390202	S	1436	ACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGC	X	-	70835904-70835953	Xq13.1d	Homo sapiens chemokine (C-X-C motif) receptor 3 (CXCR3), transcript variant A, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10903743] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10741397] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9064356] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 10741397] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10903763] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10942362] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10903743] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	CD182; IP10-R; IP10; Mig-R; CKR-L2; CD183; CMKAR3; GPR9; MigR	CD182; IP10-R; IP10; Mig-R; CKR-L2; CD183; CMKAR3; GPR9; MigR
Homo sapiens	RefSeq	NM_002035.1	ILMN_5671	FVT1	NM_002035.1	NM_002035.1		2531	4503816	NM_002035.1	FVT1	NP_002026.1	ILMN_2154053	0000160537	S	1835	CTCAAATGCTTAGGGAACGTTTCATTTCTCATTCATGGGGAAAGGCAGCC	18	-	59149216-59149265	18q21.33b	Homo sapiens follicular lymphoma variant translocation 1 (FVT1), mRNA.					
Homo sapiens	RefSeq	NM_002035.1	ILMN_5671	FVT1	NM_002035.1	NM_002035.1		2531	4503816	NM_002035.1	FVT1	NP_002026.1	ILMN_2154052	0001740242	S	1670	GACAGCCCTGTGTTGTGCTCAGGACTCACTCTGCTGCTGGTGGAAACTCA	18	-	59149381-59149430	18q21.33b	Homo sapiens follicular lymphoma variant translocation 1 (FVT1), mRNA.					
Homo sapiens	Unigene	Hs.573062	ILMN_125243	HS.573062	Hs.573062		Hs.573062		34454523	CF454867			ILMN_1888359	0002600707	S	266	ACAGGCCTTTGACCTCCTGGAAAGCACTGCTCAAAAGTCATTAGTGCCCA	4	+	96297980-96298029		AGENCOURT_15463101 Human Anterior Horn Homo sapiens cDNA clone IMAGE:30516556 5, mRNA sequence					
Homo sapiens	Unigene	Hs.334493	ILMN_86567	HS.334493	Hs.334493		Hs.334493		13928408	AB027121			ILMN_1869651	0000770465	S	468	GGCTTCCTCCTCCACCCATGGAATAAGCCAGAATGCTGAAAGTGGGAGGG	18	+	44033137-44033186		Homo sapiens mRNA for HEIL1, complete cds					
Homo sapiens	Unigene	Hs.555181	ILMN_112210	HS.555181	Hs.555181		Hs.555181		18507115	BM458075			ILMN_1859863	0004280040	S	643	GGGTAACCAGCGTTCTTAAATGTATGGTTTTTGACCAGGTGGACCCCTTT	2	+	61011875-61011916:61011918-61011925		AGENCOURT_6411402 NIH_MGC_71 Homo sapiens cDNA clone IMAGE:5530423 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001721608.1	ILMN_349075	LOC100131820	XM_001721608.1	XM_001721608.1		100131820	169203328	XM_001721608.1	LOC100131820	XP_001721660.1	ILMN_3292013	0001660326	M	259	GGGTAGGGACACAGCCAAACCATATCACTGCCCCAGAACTCAACTTTTCC				11p15.4a	PREDICTED: Homo sapiens hypothetical protein LOC100131820 (LOC100131820), mRNA.					
Homo sapiens	RefSeq	XM_934208.1	ILMN_44411	LOC653468	XM_934208.1	XM_934208.1		653468	89031240	XM_934208.1	LOC653468	XP_939301.1	ILMN_1665144	0000110376	I	1228	TACGGCTGGCCTATTATTGCTGTATTCTAACTTATTCATCTCCTATGTGT	10	-	75143093-75143096:75147779-75147824		PREDICTED: Homo sapiens similar to centaurin, gamma-like family, member 1, transcript variant 4 (LOC653468), mRNA.					
Homo sapiens	RefSeq	XR_000529.1	ILMN_14328	TRPC2	NR_002720.1	NR_002720.1		7221	84872003	NR_002720.1	TRPC2		ILMN_1661657	0004230746	S	1004	GGGATTGTGAGGACCCAGGAATCATCAGGAACCGGGCTTCAGGACACTGG	11	+	3615180-3615229	11p15.4d	Homo sapiens transient receptor potential cation channel, subfamily C, member 2 (pseudogene) (TRPC2), non-coding RNA.					
Homo sapiens	RefSeq	NR_002720.1	ILMN_14328	TRPC2	NR_002720.1	NR_002720.1		7221	84872003	NR_002720.1	TRPC2		ILMN_2127007	0004610008	S	477	AGTGGACGTTTGCTCGCTCCAAGCTGTATCTGTTCTACTTCTGAGAGGGC	11	+	3612874-3612923	11p15.4d	Homo sapiens transient receptor potential cation channel, subfamily C, member 2 (pseudogene) (TRPC2), non-coding RNA.					
Homo sapiens	RefSeq	NM_006424.2	ILMN_13850	SLC34A2	NM_006424.2	NM_006424.2		10568	110611905	NM_006424.2	SLC34A2	NP_006415.2	ILMN_2184109	0004490037	S	3527	ATCTAGGAAAGGAGGAGTGGGTGTAGCCGTGCAGCAAGATTGGGGCCTCC	4	+	25288842-25288891	4p15.2c	Homo sapiens solute carrier family 34 (sodium phosphate), member 2 (SLC34A2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10329428] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10329428] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 10329428] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [pmid 10329428] [evidence TAS]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA];  [goid 15321] [pmid 10329428] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NPTIIb; NAPI-3B; FLJ90534; NAPI-IIb	NPTIIb; NAPI-3B; FLJ90534; NAPI-IIb
Homo sapiens	RefSeq	NM_024938.2	ILMN_1983	PCNXL2	NM_024938.2	NM_024938.2		80003	33946286	NM_024938.2	PCNXL2	NP_079214.2	ILMN_1660541	0005700603	I	3210	CAGAGAAACTCACCACAGTGTTTTTCCTTGGATCCCATGATGCCCAGATG	1	-	231267947-231267996	1q42.2b-q42.2c	Homo sapiens pecanex-like 2 (Drosophila) (PCNXL2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA0435; FLJ11383	KIAA0435; FLJ11383
Homo sapiens	RefSeq	NM_005720.2	ILMN_15741	ARPC1B	NM_005720.2	NM_005720.2		10095	22907055	NM_005720.2	ARPC1B	NP_005711.1	ILMN_2085760	0000130717	S	114	GAGCCCATCAGCTGCCACGCCTGGAACAAGGACCGCACCCAGATTGCCAT	7	+	98821298-98821337:98822244-98822253	7q22.1b	Homo sapiens actin related protein 2/3 complex, subunit 1B, 41kDa (ARPC1B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [pmid 9230079] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9230079] [evidence TAS]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9230079] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	p41-ARC; ARC41; p40-ARC	p41-ARC; ARC41; p40-ARC
Homo sapiens	Unigene	Hs.543052	ILMN_106723	HS.543052	Hs.543052		Hs.543052		4299106	AI434856			ILMN_1852349	0005820156	S	344	GAAGGAGTGAGAGGCCTAAGAAGATTGTGAGGGTATTTAGGGGAATATGG	3	+	99916398-99916447		ti13b08.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2130327 3, mRNA sequence					
Homo sapiens	RefSeq	XM_941705.1	ILMN_38603	LOC652286	XM_941705.1	XM_941705.1		652286	89070773	XM_941705.1	LOC652286	XP_946798.1	ILMN_1740545	0000160300	S	2	TGAGCCACCATGATGTGACCTCCACAAAAGGAAATGAGTTTGAAGATTAC					PREDICTED: Homo sapiens similar to Probable ATP-dependent RNA helicase DDX6 (DEAD-box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK homolog) (LOC652286), mRNA.					
Homo sapiens	RefSeq	NM_001033044.1	ILMN_26367	GLUL	NM_001033056.1	NM_001033056.1		2752	74271825	NM_001033056.1	GLUL	NP_001028228.1	ILMN_1653496	0007550392	A	2955	CACTGGAGTGATGTTGCTGACCAGCCGTTTCCTGTACCTCTCTAAGTTGG	1	-	180618492-180618541	1q25.3c	Homo sapiens glutamate-ammonia ligase (glutamine synthetase) (GLUL), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6542] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the reaction: ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine [goid 4356] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	GLNS; GS; PIG59; PIG43	GLNS; GS; PIG59; PIG43
Homo sapiens	RefSeq	NM_001033056.1	ILMN_26367	GLUL	NM_001033056.1	NM_001033056.1		2752	74271825	NM_001033056.1	GLUL	NP_001028228.1	ILMN_1765208	0000130392	I	127	TCGTGGTGGGGCCTTCGGAGCAATCGTCCTGGTTCTGGCGATGGTTGAGA	1	-	180626955-180627004	1q25.3c	Homo sapiens glutamate-ammonia ligase (glutamine synthetase) (GLUL), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6542] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the reaction: ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine [goid 4356] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	GLNS; GS; PIG59; PIG43	GLNS; GS; PIG59; PIG43
Homo sapiens	RefSeq	NM_005917.2	ILMN_4304	MDH1	NM_005917.2	NM_005917.2		4190	21735619	NM_005917.2	MDH1	NP_005908.1	ILMN_1656913	0003390603	S	838	CCCCAGAGGGAGAGTTTGTGTCCATGGGTGTTATCTCTGATGGCAACTCC	2	+	63686024-63686031:63686577-63686618	2p15a	Homo sapiens malate dehydrogenase 1, NAD (soluble) (MDH1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15565635] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8786100] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate [goid 4470] [pmid 8786100] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Also oxidizes some other 2-hydroxydicarboxylic acids [goid 30060] [evidence IEA]; Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Also oxidizes some other 2-hydroxydicarboxylic acids [goid 30060] [pmid 15565635] [evidence EXP]	MOR2; MDH-s; MGC:1375; MDHA	MOR2; MDH-s; MGC:1375; MDHA
Homo sapiens	RefSeq	NR_024502.1	ILMN_370622	ASFMR1	NR_024502.1	NR_024502.1		100126270	213688403	NR_024502.1	ASFMR1		ILMN_3259153	0002000672	M	2121	CTGATCGGGCATCTAGGTTACTGCCAACTCCCTGAAGTCATACTGTGGTG	X	-	146991262-146991311		Homo sapiens antisense fragile X mental retardation protein (ASFMR1), transcript variant 4, non-coding RNA.					
Homo sapiens	RefSeq	NM_002899.2	ILMN_11289	RBP1	NM_002899.2	NM_002899.2		5947	8400726	NM_002899.2	RBP1	NP_002890.1	ILMN_1656837	0006650731	S	382	CAGTGAGCTGGGACGGAGACAAGCTCCAGTGTGTGCAGAAGGGTGAGAAG	3	-	140719986-140720035	3q23a	Homo sapiens retinol binding protein 1, cellular (RBP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]	RBPC; CRBP1; CRBP; CRABP-I	RBPC; CRBP1; CRBP; CRABP-I
Homo sapiens	Unigene	Hs.579479	ILMN_131660	HS.579479	Hs.579479		Hs.579479		83086115	DB302602			ILMN_1888264	0002100168	S	504	CTGTGGCCTGTGACAATGTCAATGAACTTGTGTCTGACTTGGGGTGTGGG	18	+	14719873-14719922		DB302602 BRAMY2 Homo sapiens cDNA clone BRAMY2033623 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001952.3	ILMN_21495	E2F6	NM_198256.2	NM_198256.2		1876	109637794	NM_198256.2	E2F6	NP_937987.2	ILMN_1656196	0007510707	A	2100	TGTACCTTGCCCTCTCTCCAGCTCTGCTCCCACATTTTCACATACCTAGC	2	-	11585591-11585640	2p25.1b	Homo sapiens E2F transcription factor 6 (E2F6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9501179] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IEA]; Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9501179] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	E2F-6; MGC111545	E2F-6; MGC111545
Homo sapiens	RefSeq	NM_032852.2	ILMN_29828	ATG4C	NM_032852.2	NM_032852.2		84938	30410843	NM_032852.2	ATG4C	NP_116241.2	ILMN_1700923	0005090291	A	1273	GTCAGCATAAAGGATTTCCCTCTTGAGACATTCCACTGCCCTTCTCCCAA	1	+	63073085-63073111:63079687-63079709	1p31.3c	Homo sapiens ATG4 autophagy related 4 homolog C (S. cerevisiae) (ATG4C), transcript variant 7, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12446702] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12446702] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12446702] [evidence ISS]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 12446702] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 12446702] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12446702] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 12446702] [evidence ISS]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [pmid 12446702] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [pmid 12446702] [evidence IGI]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 12446702] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12446702] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12446702] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 12446702] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	FLJ14867; AUTL3; AUTL1; APG4C; APG4-C	FLJ14867; AUTL3; AUTL1; APG4C; APG4-C
Homo sapiens	RefSeq	NM_032852.2	ILMN_29828	ATG4C	NM_032852.2	NM_032852.2		84938	30410843	NM_032852.2	ATG4C	NP_116241.2	ILMN_2383727	0002970528	A	1096	AGACTTGGTGGAGAAAGAACCAACACCGACTACTTAGAATTTGTGAAGGG	1	+	63067388-63067435:63072297-63072298	1p31.3c	Homo sapiens ATG4 autophagy related 4 homolog C (S. cerevisiae) (ATG4C), transcript variant 7, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12446702] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12446702] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12446702] [evidence ISS]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 12446702] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 12446702] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12446702] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 12446702] [evidence ISS]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [pmid 12446702] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [pmid 12446702] [evidence IGI]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 12446702] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12446702] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12446702] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 12446702] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	FLJ14867; AUTL3; AUTL1; APG4C; APG4-C	FLJ14867; AUTL3; AUTL1; APG4C; APG4-C
Homo sapiens	RefSeq	NR_024062.1	ILMN_364523	UBE2DNL	NR_024062.1	NR_024062.1		100131816	195927032	NR_024062.1	UBE2DNL		ILMN_3239223	0001470703	S	374	CCAAGGGTTGCGGACTATGGCCCTAAAGCTCATCCACAAGGAGTTCCTCG	X	+	84189530-84189579	Xq21.1e	Homo sapiens ubiquitin-conjugating enzyme E2D N-terminal like pseudogene (UBE2DNL), non-coding RNA.		The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]		
Homo sapiens	RefSeq	NM_214710.1	ILMN_17609	PRSSL1	NM_214710.2	NM_214710.2		400668	141802910	NM_214710.2	PRSSL1	NP_999875.1	ILMN_1673605	0002360603	S	771	TGTACACGCAGGTGTCCGCCTTTGTGGCCTGGATCTGGGACGTGGTTCGG				19p13.3j	Homo sapiens protease, serine-like 1 (PRSSL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	UNQ782	UNQ782
Homo sapiens	RefSeq	NM_001040437.1	ILMN_163175	C6ORF48	NM_001040437.1	NM_001040437.1		50854	94681054	NM_001040437.1	C6orf48	NP_001035527.1	ILMN_2285708	0001190082	I	338	TGCCATGTTGTCCAGGCTGGTCTCTACTCCTGGGCTCAAGCAGTCCTCCT	6	+	31804212-31804261	6p21.32b	Homo sapiens chromosome 6 open reading frame 48 (C6orf48), transcript variant 1, mRNA.				G8; D6S57	G8; D6S57
Homo sapiens	RefSeq	NM_001040437.1	ILMN_163175	C6ORF48	NM_001040437.1	NM_001040437.1		50854	94681054	NM_001040437.1	C6orf48	NP_001035527.1	ILMN_2391765	0007150017	A	551	GTGATTCCTGCAACTTGACCTTCAGGCTGGGAGAGGTGGAGAGCCATGCC	6	+	31805143-31805192	6p21.32b	Homo sapiens chromosome 6 open reading frame 48 (C6orf48), transcript variant 1, mRNA.				G8; D6S57	G8; D6S57
Homo sapiens	RefSeq	NM_001040697.1	ILMN_164474	UEVLD	NM_001040697.1	NM_001040697.1		55293	103472010	NM_001040697.1	UEVLD	NP_001035787.1	ILMN_2408968	0006650592	A	1718	CTGTTCTTTAAATCTACAGCAGGGGTAAACATTCATCTGCAGTGTGCATC	11	-	18553471-18553520	11p15.1c	Homo sapiens UEV and lactate/malate dehyrogenase domains (UEVLD), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]	ATTP; FLJ11068; UEV3	ATTP; FLJ11068; UEV3
Homo sapiens	RefSeq	NM_005187.4	ILMN_11754	CBFA2T3	NM_005187.4	NM_005187.4		863	28872802	NM_005187.4	CBFA2T3	NP_005178.4	ILMN_1657627	0000630053	A	3546	TCTCGGCCCCATCGCCCCACCGCAGCTACTCCCCTTTCTTCCAAACTTTT	16	-	88941936-88941985	16q24.3a	Homo sapiens core-binding factor, runt domain, alpha subunit 2; translocated to, 3 (CBFA2T3), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9447981] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZMYND4; MTGR2; MTG16; ETO2	ZMYND4; MTGR2; MTG16; ETO2
Homo sapiens	RefSeq	XM_372840.3	ILMN_35379	LOC391209	XM_372840.3	XM_372840.3		391209	88947007	XM_372840.3	LOC391209	XP_372840.3	ILMN_1792622	0005890309	S	2	TGGCAAACACTCAGCTGTCTCTGGTCCATCGCACTTGTACAGTCCTGCAG					PREDICTED: Homo sapiens similar to ribosomal protein L36 (LOC391209), mRNA.					
Homo sapiens	RefSeq	NM_176891.3	ILMN_164114	IFNE1	NM_176891.3	NM_176891.3		338376	54262143	NM_176891.3	IFNE1	NP_795372.1	ILMN_2097997	0006840441	S	1092	CAGGACTACAGCACCTGTGCCTGGGCCATTGTCCAAGTAGAAATCAGCCG	9	-	21471171-21471220	9p21.3c	Homo sapiens interferon epsilon 1 (IFNE1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	 [goid 5126] [evidence IEA]	MGC119018; PRO655; MGC119020; IFNT1	MGC119018; PRO655; MGC119020; IFNT1
Homo sapiens	RefSeq	NM_176891.3	ILMN_164114	IFNE1	NM_176891.3	NM_176891.3		338376	54262143	NM_176891.3	IFNE1	NP_795372.1	ILMN_1734781	0006380541	S	984	GCACTCATGGGACTGGAAGCAGAGAAGCTAAGTGGTACTTTGGGTAGTGA	9	-	21471279-21471328	9p21.3c	Homo sapiens interferon epsilon 1 (IFNE1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	 [goid 5126] [evidence IEA]	MGC119018; PRO655; MGC119020; IFNT1	MGC119018; PRO655; MGC119020; IFNT1
Homo sapiens	RefSeq	NR_002771.1	ILMN_10083	DLEU2L	NR_002771.1	NR_002771.1		79469	84872048	NR_002771.1	DLEU2L		ILMN_2143011	0003420615	S	1003	AGTTGGACCCTTGTGTTTTGAAGAAATGCCAACTGCTTGAAGAATTTCCT	1	+	63788241-63788290	1p31.3c	Homo sapiens deleted in lymphocytic leukemia 2-like (DLEU2L), non-coding RNA.				BCMSUNL	BCMSUNL
Homo sapiens	RefSeq	NM_004169.3	ILMN_18055	SHMT1	NM_004169.3	NM_004169.3		6470	22547185	NM_004169.3	SHMT1	NP_004160.3	ILMN_1743784	0003420433	I	1063	TATCAATTCTGCTGTGTTCCCTGGCCTGCAGGGAGGTCCCCACAACCACG	17	-	18238881-18238930	17p11.2f	Homo sapiens serine hydroxymethyltransferase 1 (soluble) (SHMT1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17482557] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 627563] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9753690] [evidence EXP]	The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA]; The chemical reactions and pathways involving L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6563] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA]; The chemical reactions and pathways involving L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6563] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6565] [pmid 17482557] [evidence IDA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 9113] [pmid 11516159] [evidence IDA]; The chemical reactions and pathways involving folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 46655] [pmid 11278996] [evidence IDA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [pmid 9753690] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [pmid 8505317] [evidence IDA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [pmid 17482557] [evidence IDA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [pmid 627563] [evidence EXP]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [pmid 9753690] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [pmid 17482557] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9753690] [evidence IDA]	MGC15229; MGC24556; SHMT; CSHMT	MGC15229; SHMT; CSHMT; MGC24556
Homo sapiens	RefSeq	NM_148918.1	ILMN_18055	SHMT1	NM_004169.3	NM_004169.3		6470	22547185	NM_004169.3	SHMT1	NP_004160.3	ILMN_1811933	0002690528	A	2276	CCAGGCTTTCCTGCTCCACCTGAGATAACCAACTCCCTCCCGTAATCAGG	17	-	18231380-18231429	17p11.2f	Homo sapiens serine hydroxymethyltransferase 1 (soluble) (SHMT1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17482557] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 627563] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9753690] [evidence EXP]	The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA]; The chemical reactions and pathways involving L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6563] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA]; The chemical reactions and pathways involving L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6563] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6565] [pmid 17482557] [evidence IDA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 9113] [pmid 11516159] [evidence IDA]; The chemical reactions and pathways involving folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 46655] [pmid 11278996] [evidence IDA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [pmid 9753690] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [pmid 8505317] [evidence IDA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [pmid 17482557] [evidence IDA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [pmid 627563] [evidence EXP]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + glycine + H2O = tetrahydrofolate + L-serine [goid 4372] [pmid 9753690] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [pmid 17482557] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9753690] [evidence IDA]	MGC15229; MGC24556; SHMT; CSHMT	MGC15229; SHMT; CSHMT; MGC24556
Homo sapiens	RefSeq	XM_001721112.1	ILMN_333907	LOC100131891	XM_001721112.1	XM_001721112.1		100131891	169210236	XM_001721112.1	LOC100131891	XP_001721164.1	ILMN_3274299	0001470167	M	1547	CCTAATGAGCATGACCTTCTGGACCCATCTTCACAGCTCTGGTGCCAGTG				16p11.2a	PREDICTED: Homo sapiens hypothetical protein LOC100131891 (LOC100131891), mRNA.					
Homo sapiens	RefSeq	XM_001721503.1	ILMN_336847	LOC442676	XM_001721503.1	XM_001721503.1		442676	169172339	XM_001721503.1	LOC442676	XP_001721555.1	ILMN_3201380	0006900575	A	1390	ATGTCATTGCTGATGATGGCTTTAGCACCACTGACACTGATCTCAAGTTC				7p11.2b	PREDICTED: Homo sapiens hypothetical protein LOC442676 (LOC442676), mRNA.					
Homo sapiens	RefSeq	XM_001732889.1	ILMN_344978	LOC649941	XM_001732889.1	XM_001732889.1		649941	169217796	XM_001732889.1	LOC649941	XP_001732941.1	ILMN_3232862	0001990324	I	1267	ATGGATGCGGGGTTGGGAAGAGGATGCACTGCAGGATCACTGCAGGATGC					PREDICTED: Homo sapiens similar to putative DUX4 protein (LOC649941), mRNA.					
Homo sapiens	RefSeq	NM_003003.1	ILMN_137926	SEC14L1	NM_003003.1	NM_003003.1		6397	4506866	NM_003003.1	SEC14L1	NP_002994.1	ILMN_1732575	0003060379	S	4957	AGAACTGTTTGAATTGCAGCCATCCCCTGCCCCCTCCCAGGCTGAAGATC	17	+	72724294-72724343	17q25.2b	Homo sapiens SEC14-like 1 (S. cerevisiae) (SEC14L1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 8697811] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8697811] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [pmid 8697811] [evidence TAS]	SEC14L; DKFZp686C06176	SEC14L; DKFZp686C06176
Homo sapiens	RefSeq	NM_001040715.1	ILMN_167940	KIAA0895L	NM_001040715.1	NM_001040715.1		653319	106507203	NM_001040715.1	KIAA0895L	NP_001035805.1	ILMN_2176755	0004560066	S	1751	TTCCGCAAGCAGCCGTTCCTGTGGCGCGCTGCACTGCTCTACTACACCAT	16	-	67212229-67212278	16q22.1a	Homo sapiens KIAA0895-like (KIAA0895L), mRNA. XM_933435 XM_933438 XM_933442 XM_933445 XM_933447 XM_941971 XM_945589 XM_945591 XM_945592 XM_945593 XM_945594 XM_945596 XM_945598 XM_945599 XM_945600					
Homo sapiens	RefSeq	NM_001040715.1	ILMN_167940	KIAA0895L	NM_001040715.1	NM_001040715.1		653319	106507203	NM_001040715.1	KIAA0895L	NP_001035805.1	ILMN_3244987	0000580463	S	3103	GGACAGGCCCTAGAGTTTGGTGGCCCAAGTCCTGAACCCCTCTTAGACCA	16	-	67209752-67209801	16q22.1a	Homo sapiens KIAA0895-like (KIAA0895L), mRNA. XM_933435 XM_933438 XM_933442 XM_933445 XM_933447 XM_941971 XM_945589 XM_945591 XM_945592 XM_945593 XM_945594 XM_945596 XM_945598 XM_945599 XM_945600					
Homo sapiens	RefSeq	NM_032528.1	ILMN_15723	ST6GAL2	NM_032528.1	NM_032528.1		84620	26190609	NM_032528.1	ST6GAL2	NP_115917.1	ILMN_1797102	0002190129	S	1714	CTTCCAGGCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCCACACTCTT	2	-	106789568-106789617	2q12.3a	Homo sapiens ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 (ST6GAL2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12235148] [evidence NAS]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 12235148] [evidence NAS]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [evidence ISS]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [pmid 12235148] [evidence IDA]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [evidence ISS]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [pmid 12235148] [evidence NAS]	Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-acetyl-beta-D-glucosamine = CMP + alpha-N-acetylneuraminyl-2,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosamine [goid 3835] [evidence ISS]; Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-acetyl-beta-D-glucosamine = CMP + alpha-N-acetylneuraminyl-2,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosamine [goid 3835] [pmid 12235148] [evidence IDA]; Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-acetyl-beta-D-glucosamine = CMP + alpha-N-acetylneuraminyl-2,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosamine [goid 3835] [evidence ISS]	SIAT2; KIAA1877; ST6GalII	SIAT2; KIAA1877; ST6GalII
Homo sapiens	RefSeq	XM_944721.1	ILMN_32590	LOC651495	XM_944721.1	XM_944721.1		651495	89035215	XM_944721.1	LOC651495	XP_949814.1	ILMN_1795728	0006200639	S	1	TAACCGGGCAGTTGATCCACCAGGCAAGTGACAATCAGGATGCAGGAAGA					PREDICTED: Homo sapiens hypothetical protein LOC651495 (LOC651495), mRNA.					
Homo sapiens	RefSeq	XM_941449.1	ILMN_42129	LOC652115	XM_941449.1	XM_941449.1		652115	89043122	XM_941449.1	LOC652115	XP_946542.1	ILMN_1779915	0005360050	S	54	CAGCACCCACTGCCTAGGGGAGGTCGAACCAGTGTCCCCCAAGTCTAACA					PREDICTED: Homo sapiens similar to F59A6.3 (LOC652115), mRNA.					
Homo sapiens	RefSeq	XM_001714904.1	ILMN_345270	LOC100128765	XM_001714904.1	XM_001714904.1		100128765	169205889	XM_001714904.1	LOC100128765	XP_001714956.1	ILMN_3232912	0006420484	I	211	CCAGGGACCTTCTCCAGAACCTCTGAAGTTGATTGGTTGAGTCAAACATT	13	+	18598688-18598720:18600032-18600048	13q12.11a	PREDICTED: Homo sapiens similar to hCG2041516 (LOC100128765), mRNA.					
Homo sapiens	RefSeq	NM_001032279.1	ILMN_9401	RCE1	NM_001032279.1	NM_001032279.1		9986	73858574	NM_001032279.1	RCE1	NP_001027450.1	ILMN_1685002	0003520288	A	1263	CAGGTCCCAGGAGCCACACACTCCCTTCCTCACTTTGGACTGCTGCTTCT	11	+	66370375-66370424	11q13.1e	Homo sapiens RCE1 homolog, prenyl protein peptidase (S. cerevisiae) (RCE1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10085068] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10085068] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 10085068] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FACE2; RCE1B; RCE1A	FACE2; RCE1B; RCE1A
Homo sapiens	RefSeq	NM_001032279.1	ILMN_9401	RCE1	NM_001032279.1	NM_001032279.1		9986	73858574	NM_001032279.1	RCE1	NP_001027450.1	ILMN_2337492	0006290187	A	834	ATTACATGGGTTTCCCAGCTGTTTGCGCGGCCTTGGAGCACCCACAGAGG	11	+	66369946-66369995	11q13.1e	Homo sapiens RCE1 homolog, prenyl protein peptidase (S. cerevisiae) (RCE1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10085068] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10085068] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 10085068] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FACE2; RCE1B; RCE1A	FACE2; RCE1B; RCE1A
Homo sapiens	RefSeq	XM_939941.1	ILMN_40092	LOC650853	XM_939941.1	XM_939941.1		650853	89061779	XM_939941.1	LOC650853	XP_945034.1	ILMN_1663657	0004150730	S	226	CTTCCTAGTGGAGCTGTGAGAAGGGGGCCACTGTCATCTGGATCTGAAAA					PREDICTED: Homo sapiens hypothetical protein LOC650853 (LOC650853), mRNA.					
Homo sapiens	Unigene	Hs.559851	ILMN_113893	HS.559851	Hs.559851		Hs.559851		23681681	BU740879			ILMN_1910028	0002600270	S	122	GCACTGGAATCAAGATAGACAACCAGAAGGGGCTTGAGACGACAGAGCCC	10	+	32580475-32580524		UI-E-EJ0-aik-g-22-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-aik-g-22-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_152777.2	ILMN_710	C14ORF48	NM_152777.2	NM_152777.2		256369	34303957	NM_152777.2	C14orf48	NP_689990.1	ILMN_1668914	0004010369	S	908	GCTGCTCGGCTACATGCAAATGACCATCACCAACATGGCCCGGCAGTGCT	14	+	93540958-93541007	14q32.13a	Homo sapiens chromosome 14 open reading frame 48 (C14orf48), mRNA.				c14_5713; MGC33356	c14_5713; MGC33356
Homo sapiens	RefSeq	XM_001722866.1	ILMN_350851	LOC100128156	XM_001722866.1	XM_001722866.1		100128156	169167654	XM_001722866.1	LOC100128156	XP_001722918.1	ILMN_3271300	0003360204	M	536	CCCAGAAGATGGACCAGCTCCCGCTGAAGAAGCTCTCGATGTTGGCACTT	5	+	79475334-79475383	5q14.1d	PREDICTED: Homo sapiens hypothetical protein LOC100128156 (LOC100128156), mRNA.					
Homo sapiens	RefSeq	NM_001136123.1	ILMN_370811	FAM178A	NM_001136123.1	NM_001136123.1		55719	209915546	NM_001136123.1	FAM178A	NP_001129595.1	ILMN_3232080	0002570612	I	4044	ACAATTTCATGTATTCTTAATAGTTTTGCTGAATGGCACTCTTCATACTG	10	+	102719269-102719318	10q24.31a	Homo sapiens family with sequence similarity 178, member A (FAM178A), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	XM_497141.2	ILMN_41472	LOC441511	XM_497141.2	XM_497141.2		441511	89059964	XM_497141.2	LOC441511	XP_497141.1	ILMN_1674201	0006860592	S	1	ATGGTGCTCCTAGGATTATCAGAGCCTATCTTTCAGCTCCCTAGATCTTT	X	+	108699578-108699627	Xq22.3c	PREDICTED: Homo sapiens similar to mitofusin 1 (LOC441511), mRNA.					
Homo sapiens	RefSeq	NM_201437.1	ILMN_9423	TCEA1	NM_201437.1	NM_201437.1		6917	45439354	NM_201437.1	TCEA1	NP_958845.1	ILMN_2357770	0000110427	A	1005	CAGATGGCCAAGACTGGTGGGACCCAGACTGACTTGTTCACATGTGGCAA	8	-	55054168-55054217	8q11.23d	Homo sapiens transcription elongation factor A (SII), 1 (TCEA1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]	The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 1708494] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SII; GTF2S; TF2S; TCEA; TFIIS	SII; GTF2S; TF2S; TCEA; TFIIS
Homo sapiens	RefSeq	NM_006732.1	ILMN_13603	FOSB	NM_006732.1	NM_006732.1		2354	5803016	NM_006732.1	FOSB	NP_006723.1	ILMN_1751607	0007160239	S	3716	TGGGCCGTCCCCTCTCCCCTTGGTTCTGCACTGTTGCCAATAAAAAGCTC	19	+	50670217-50670266	19q13.32a	Homo sapiens FBJ murine osteosarcoma viral oncogene homolog B (FOSB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 1900040] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8706134] [evidence TAS]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [pmid 8706134] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 1900040] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	GOS3; G0S3; MGC42291; GOSB; DKFZp686C0818	GOS3; MGC42291; GOSB; DKFZp686C0818; G0S3
Homo sapiens	RefSeq	NR_024418.1	ILMN_370593	LOC389332	NR_024418.1	NR_024418.1		389332	212286160	NR_024418.1	LOC389332		ILMN_3239643	0006370008	S	1571	TAAGGACCCAGTTTCTTCTGTGAGCACGGGCAGTGGGAGGCCGGTGGAAA	5	-	135527231-135527280	5q31.2a	Homo sapiens hypothetical LOC389332 (LOC389332), non-coding RNA.					
Homo sapiens	RefSeq	XR_000589.1	ILMN_35186	LOC390387	XR_000589.1	XR_000589.1		390387	89036669	XR_000589.1	LOC390387		ILMN_1785462	0005090129	I	77	AGTCGCTGAGGGTCCTAGTTGCTGGGCGCTACACCTGCACGGCTGACCCA	13	+	24459125-24459174		PREDICTED: Homo sapiens similar to Striatin (LOC390387), misc RNA.					
Homo sapiens	RefSeq	NM_152523.1	ILMN_15457	CCNYL1	NM_152523.1	NM_152523.1		151195	22749084	NM_152523.1	CCNYL1	NP_689736.1	ILMN_1810069	0001410398	S	1431	GGCTCCCATCCTACACACAGATATTTGCTTACTGTGTGGGCCGATAGCTG	2	+	208326913-208326962	2q33.3d	Homo sapiens cyclin Y-like 1 (CCNYL1), mRNA.				FLJ40432	FLJ40432
Homo sapiens	RefSeq	NM_152523.1	ILMN_15457	CCNYL1	NM_152523.1	NM_152523.1		151195	22749084	NM_152523.1	CCNYL1	NP_689736.1	ILMN_2166524	0002060112	S	1657	GGAGCAGACAGCAGCGTTGTTAGGTACTGAAGGGTTCTTCCTCCCTACTG	2	+	208327139-208327188	2q33.3d	Homo sapiens cyclin Y-like 1 (CCNYL1), mRNA.				FLJ40432	FLJ40432
Homo sapiens	RefSeq	XM_928115.1	ILMN_39801	LOC643430	XM_928115.1	XM_928115.1		643430	89038687	XM_928115.1	LOC643430	XP_933208.1	ILMN_1718542	0007160326	S	1	TCTGACGCTTTAGTTAAGATAAGGCTGATATCACTGACTAATGAAAATGC	15	+	97615673-97615722		PREDICTED: Homo sapiens similar to Endoplasmin precursor (94 kDa glucose-regulated protein) (GRP94) (gp96 homolog) (Tumor rejection antigen 1) (LOC643430), mRNA.					
Homo sapiens	RefSeq	NM_178549.2	ILMN_26289	ZNF678	NM_178549.2	NM_178549.2		339500	31341723	NM_178549.2	ZNF678	NP_848644.1	ILMN_2095789	0006420170	S	2141	CAGACTTTATTCAACTTTAGAGGATTTTACGGGGGCAAAAAACCTCCTAC	1	+	225910370-225910419	1q42.13b	Homo sapiens zinc finger protein 678 (ZNF678), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC42493	MGC42493
Homo sapiens	RefSeq	NM_019590.2	ILMN_307094	KIAA1217	NM_001098500.1	NM_001098500.1		56243	148612812	NM_001098500.1	KIAA1217	NP_001091970.1	ILMN_1706960	0001450731	S	5936	GCAAGTGTGGTGCCTTGGATGTGGCCTGTTGGCTCGCTTTCTTCTCTGTG	10	+	24820795-24820844	10p12.2a-p12.1d	Homo sapiens KIAA1217 (KIAA1217), transcript variant 2, mRNA.				DKFZP761L0424; RP11-324E23.1; MGC31990; SKT	DKFZP761L0424; RP11-324E23.1; MGC31990
Homo sapiens	Unigene	Hs.562901	ILMN_115897	HS.562901	Hs.562901		Hs.562901		4971815	AI694475			ILMN_1858084	0000150379	S	333	AAATGCATATTTTCACAGACTAGAAATTAATGAAACATCTGAATATCATT					wd62f11.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2336205 3, mRNA sequence					
Homo sapiens	RefSeq	NM_152317.2	ILMN_42211	DEPDC4	NM_152317.2	NM_152317.2		120863	90855782	NM_152317.2	DEPDC4	NP_689530.1	ILMN_2135527	0002140743	S	960	TACGACGGCTACTTACTTTTATGGCAATGGCATCAGAGCCCAATGCCTAC	12	-	100646186-100646235	12q23.1d	Homo sapiens DEP domain containing 4 (DEPDC4), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		FLJ33505; DEP.4	FLJ33505; DEP.4
Homo sapiens	RefSeq	XR_037362.1	ILMN_344219	LOC728728	XR_037362.1	XR_037362.1		728728	169160935	XR_037362.1	LOC728728		ILMN_3302350	0006330711	M	3356	GTCCTCAAGTTGGCCTCCCCAGGCCCAGCAACGGCCTCTCGGCGGCCTTT				1q42.13b	PREDICTED: Homo sapiens misc_RNA (LOC728728), miscRNA.					
Homo sapiens	RefSeq	XM_945802.1	ILMN_41255	LOC650268	XM_945802.1	XM_945802.1		650268	88989555	XM_945802.1	LOC650268	XP_950895.1	ILMN_1773301	0006760519	A	440	CCCAGAGCCGCTGAGGAGCAAGGCAGAGAACTGCAATCCAAGCAAATGTG					PREDICTED: Homo sapiens hypothetical protein LOC650268, transcript variant 2 (LOC650268), mRNA.					
Homo sapiens	RefSeq	XM_940183.1	ILMN_46395	LOC440055	XM_495885.3	XM_495885.3		440055	113422517	XM_495885.3	LOC440055	XP_495885.1	ILMN_1700316	0003460553	A	9	AGTTCTCGCCCTTTCCCTCCTGCCGCCGAGTCGCGCGGAGGCGGAGGCTT	11	-	74134847-74134895:74137324-74137324	11q13.4c	PREDICTED: Homo sapiens similar to ribosomal protein S12 (LOC440055), mRNA.					
Homo sapiens	RefSeq	XM_928337.1	ILMN_31193	LOC645293	XM_928337.1	XM_928337.1		645293	88942724	XM_928337.1	LOC645293	XP_933430.1	ILMN_1682520	0006180601	S	66	AAAAAAGCAGGTGAGCGGGCGCGTCCCCGCGACCGCGCTGCCTCCCCGAG	1	+	52606713-52606762		PREDICTED: Homo sapiens hypothetical protein LOC645293 (LOC645293), mRNA.					
Homo sapiens	RefSeq	XM_942540.1	ILMN_138398	SAPS2	XM_942540.1	XM_942540.1		9701	89059397	XM_942540.1	SAPS2	XP_947633.1	ILMN_1655922	0006200615	I	197	GCTTCCACCTTCTCTGTGGCTAGAAACAGGACCGTCCAGAAGTCACCTGT				22q13.33b	PREDICTED: Homo sapiens SAPS domain family, member 2, transcript variant 2 (SAPS2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NM_001002924.1	ILMN_7845	AP3S1	NM_001002924.1	NM_001002924.1		1176	50959221	NM_001002924.1	AP3S1	NP_001002924.1	ILMN_2311761	0007200402	A	598	AATCTGAGGCTGGCTTAGCAGGAGCTCCAGCCCGTGCTGTATCAGCTGTA	5	+	115266581-115266588:115276958-115276999	5q23.1a	Homo sapiens adaptor-related protein complex 3, sigma 1 subunit (AP3S1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several heterotetrameric complexes that link clathrin (or another coat-forming molecule, as hypothesized for AP-3 and AP-4) to a membrane surface; they are found on coated pits and coated vesicles, and mediate sorting of cargo proteins into vesicles. Each AP complex contains two large (a beta and one of either an alpha, gamma, delta, or epsilon) subunits (110-130 kDa), a medium (mu) subunit (approximately 50 kDa), and a small (sigma) subunit (15-20 kDa) [goid 30119] [pmid 8697810] [evidence TAS]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 9118953] [evidence TAS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 9792713] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9118953] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CLAPS3; Sigma3A	CLAPS3; Sigma3A
Homo sapiens	RefSeq	NM_080874.2	ILMN_14971	ASB5	NM_080874.2	NM_080874.2		140458	22208965	NM_080874.2	ASB5	NP_543150.1	ILMN_1711269	0001440445	S	2345	CCCAGGGCTTATTTTCTTCTGACTTCTTGGCTAACTTCCAGACTATGGGA	4	-	177372356-177372405	4q34.2a	Homo sapiens ankyrin repeat and SOCS box-containing 5 (ASB5), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Homo sapiens	RefSeq	NM_080874.2	ILMN_14971	ASB5	NM_080874.2	NM_080874.2		140458	22208965	NM_080874.2	ASB5	NP_543150.1	ILMN_2126055	0005270554	S	2658	GCTGCTTTTGGGTAAAACAGGTTTCCACCAGTATTTTCCCTGAGCTAGAG	4	-	177372043-177372092	4q34.2a	Homo sapiens ankyrin repeat and SOCS box-containing 5 (ASB5), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Homo sapiens	RefSeq	NR_015450.1	ILMN_370286	LOC285548	NR_015450.1	NR_015450.1		285548	213417850	NR_015450.1	LOC285548		ILMN_3237884	0001170184	S	1504	CCCAGGTACCCTACAAGGTTTGCACAAAGCAAGAAAGCATCATGTAACCG	4	-	13547895-13547944	4p15.33c	Homo sapiens hypothetical LOC285548 (LOC285548), non-coding RNA.					
Homo sapiens	RefSeq	XM_931821.1	ILMN_35218	LOC653366	XM_931821.1	XM_931821.1		653366	89034314	XM_931821.1	LOC653366	XP_936914.1	ILMN_1662792	0007050324	S	61	CTGGTGAACATATTCAATAAACTTGAGAACAGAGCTTTCCGGCATACCAG	11	+	104964420-104964469		PREDICTED: Homo sapiens similar to glutamate receptor, ionotrophic, AMPA 4 (LOC653366), mRNA.					
Homo sapiens	RefSeq	XM_935583.1	ILMN_45273	LOC641841	XM_935583.1	XM_935583.1		641841	89027381	XM_935583.1	LOC641841	XP_940676.1	ILMN_1716579	0006760382	S	121	ATGGCTGCAGATCTTGGCATCTCTGTGCTTTCAGGGTCCCAGGAAGCCCC					PREDICTED: Homo sapiens hypothetical protein LOC641841 (LOC641841), mRNA.					
Homo sapiens	RefSeq	NM_020824.2	ILMN_10414	ARHGAP21	NM_020824.2	NM_020824.2		57584	50345878	NM_020824.2	ARHGAP21	NP_065875.2	ILMN_1811592	0001260543	S	7025	GCATGAGGACTTAATGAATCCAAACCTGTGTCATGCCTGTGTGCATACCC	10	-	24912583-24912632	10p12.1d	Homo sapiens Rho GTPase activating protein 21 (ARHGAP21), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ33323; DKFZp761L0424; ARHGAP10	FLJ33323; DKFZp761L0424; ARHGAP10
Homo sapiens	RefSeq	NM_004645.2	ILMN_4873	COIL	NM_004645.2	NM_004645.2		8161	57863302	NM_004645.2	COIL	NP_004636.1	ILMN_1688034	0004250768	S	2456	CAGGCACCTGGCTGAGTGTGCTGGAGTGAGGATCTTGAACAGAAACTTCC	17	-	55015688-55015737	17q22c	Homo sapiens coilin (COIL), mRNA.				p80-coilin; CLN80	p80-coilin; CLN80
Homo sapiens	RefSeq	NM_032296.2	ILMN_21699	FLYWCH1	NM_032296.2	NM_032296.2		84256	62953133	NM_032296.2	FLYWCH1	NP_115672.2	ILMN_1690035	0003390661	I	4849	CAGCCCTGCCTCTGCTGGTGCTTCGCCCACAAACCCTGCTGTATGACATT	16	+	2941067-2941116	16p13.3d	Homo sapiens FLYWCH-type zinc finger 1 (FLYWCH1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_934224.1	ILMN_44680	LOC653468	XM_934224.1	XM_934224.1		653468	89031248	XM_934224.1	LOC653468	XP_939317.1	ILMN_1678390	0007380324	I	50	CGCATGGGACGAAAGGTTTCATCGGTAGAAAAGCATATAACAGGGAAATC	10	-	75110121-75110170		PREDICTED: Homo sapiens similar to centaurin, gamma-like family, member 1, transcript variant 7 (LOC653468), mRNA.					
Homo sapiens	RefSeq	XR_038120.1	ILMN_340893	LOC643873	XR_038120.1	XR_038120.1		643873	169216374	XR_038120.1	LOC643873		ILMN_3206312	0005860142	A	2099	CACCACGCAGTTGCCAGTGTGATTAGCGCCTAAGGGTCTCCATTTAGCAG				Xq23a	PREDICTED: Homo sapiens misc_RNA (LOC643873), miscRNA.					
Homo sapiens	RefSeq	XR_018777.1	ILMN_165958	LOC283155	XR_018777.1	XR_018777.1		283155	113423139	XR_018777.1	LOC283155		ILMN_3214761	0004640128	A	394	GGGCTGGAGGATGCGTTCCCTGGGTTTTATCTAGCCACATCTTGGAGACA				11q24.1a	PREDICTED: Homo sapiens misc_RNA (LOC283155), miscRNA.					
Homo sapiens	RefSeq	NM_080386.1	ILMN_30319	TUBA3D	NM_080386.1	NM_080386.1		113457	58743305	NM_080386.1	TUBA3D	NP_525125.1	ILMN_2215640	0003930132	S	1260	AGTTCGATCTCATGTATGCCAAGCGGGCCTTTGTGCACTGGTACGTGGGC	2	+	131956719-131956768	2q21.1d	Homo sapiens tubulin, alpha 3d (TUBA3D), mRNA.				H2-ALPHA	H2-ALPHA
Homo sapiens	RefSeq	NM_080386.1	ILMN_30319	TUBA3D	NM_080386.1	NM_080386.1		113457	58743305	NM_080386.1	TUBA3D	NP_525125.1	ILMN_2215639	0001240703	S	1453	TCCCCTGCCACCCCCGGGATGGCTGCTTCCAAGTTGTTTGCAATTAAAGG	2	+	131956912-131956961	2q21.1d	Homo sapiens tubulin, alpha 3d (TUBA3D), mRNA.				H2-ALPHA	H2-ALPHA
Homo sapiens	RefSeq	NM_032936.2	ILMN_19683	TMEM60	NM_032936.2	NM_032936.2		85025	24475725	NM_032936.2	TMEM60	NP_116325.1	ILMN_1752213	0004480368	S	553	GTCTTCATTCCTTTATGGGCCTTGCTGGCTGGGGCTTTAACAGAACTCGG	7	-	77261251-77261300	7q11.23g	Homo sapiens transmembrane protein 60 (TMEM60), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC74482; C7orf35; DC32	MGC74482; C7orf35; DC32
Homo sapiens	RefSeq	NM_173546.1	ILMN_6513	KLHDC8B	NM_173546.1	NM_173546.1		200942	27734908	NM_173546.1	KLHDC8B	NP_775817.1	ILMN_1695246	0007560114	S	1732	GGAGTTCAAGTGGAGGAATGCTGGCTTTGAGCCCTCTACACTGCTGGTTG	3	+	49188720-49188769	3p21.31d	Homo sapiens kelch domain containing 8B (KLHDC8B), mRNA.				FLJ11302; MGC35097	FLJ11302; MGC35097
Homo sapiens	RefSeq	XM_499019.2	ILMN_34448	LOC441119	XM_499019.2	XM_499019.2		441119	88986487	XM_499019.2	LOC441119	XP_499019.2	ILMN_1681076	0002470167	S	1091	TCAACAAGGCACGGCTCATAGTCGAGAGCCTTCAGCCCCTGGCTTCCTAC	5	-	177316133-177316148:177317030-177317063	5q35.3b	PREDICTED: Homo sapiens hypothetical LOC441119 (LOC441119), mRNA.					
Homo sapiens	RefSeq	NM_007283.5	ILMN_166333	MGLL	NM_007283.5	NM_007283.5		11343	51242951	NM_007283.5	MGLL	NP_009214.1	ILMN_1738589	0000160612	I	485	GCCTGGTTCTGATTCTCCAGGCTGTCGTGGTTGTGGAATGCAAACGCCAG	3	-	129023857-129023906	3q21.3b	Homo sapiens monoglyceride lipase (MGLL), transcript variant 1, mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9495531] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9495531] [evidence TAS]	Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [pmid 9495531] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: H2O + acylglycerol = a fatty acid + glycerol [goid 47372] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGL; HU-K5	MGL; HU-K5
Homo sapiens	RefSeq	NM_007283.5	ILMN_166333	MGLL	NM_007283.5	NM_007283.5		11343	51242951	NM_007283.5	MGLL	NP_009214.1	ILMN_1657708	0003830327	A	4233	ACCCTACAGGCCTCAGTTCCTTGCAGAGGTGAGGGGTAGAGAGTCAGCCT	3	-	128890930-128890979	3q21.3b	Homo sapiens monoglyceride lipase (MGLL), transcript variant 1, mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9495531] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9495531] [evidence TAS]	Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [pmid 9495531] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: H2O + acylglycerol = a fatty acid + glycerol [goid 47372] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGL; HU-K5	MGL; HU-K5
Homo sapiens	RefSeq	NM_032023.3	ILMN_2116	RASSF4	NM_032023.3	NM_032023.3		83937	30474868	NM_032023.3	RASSF4	NP_114412.2	ILMN_1708890	0000540564	I	433	AGAACGGGAACATCACAGCCCAGGGGCCAAGCATTCAGCCAGTGCACAAG	10	+	44799493-44799542	10q11.21c	Homo sapiens Ras association (RalGDS/AF-6) domain family member 4 (RASSF4), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AD037; MGC44914	AD037; MGC44914
Homo sapiens	RefSeq	NM_178145.1	ILMN_2116	RASSF4	NM_032023.3	NM_032023.3		83937	30474868	NM_032023.3	RASSF4	NP_114412.2	ILMN_1690566	0000010639	A	2339	GTCACAGCAGGATTTCCCCAACCCAGCTCCATCATCACAGACACAGAGAG	10	+	44810022-44810071	10q11.21c	Homo sapiens Ras association (RalGDS/AF-6) domain family member 4 (RASSF4), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AD037; MGC44914	AD037; MGC44914
Homo sapiens	RefSeq	NM_000818.1	ILMN_24471	GAD2	NM_000818.1	NM_000818.1		2572	4503874	NM_000818.1	GAD2	NP_000809.1	ILMN_1728301	0007210736	S	2058	CAGCTGCCAAAATCGTAGGTGTTGGCTCTGCTGGTCACTGGAGTAGTTGC	10	+	26633089-26633138	10p12.1b	Homo sapiens glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) (GAD2), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the formation of succinate from glutamate. Also known as GABA (gamma-aminobutyrate) shunt since it channels glutamate into the TCA cycle bypassing two steps of that cycle. There are three enzymes involved in the GABA shunt: glutamate decarboxylase (GAD), GABA aminotransferase (GABA-TA), and succinate semialdehyde dehydrogenase (SSADH). These three enzymes acting in concert to convert glutamate into succinate. The GABA shunt is predominantly associated with neurotransmission in the mammalian brain. It is also present in nonneuronal cells, in plants, in unicellular eukaryotes, and in prokaryotes [goid 6540] [pmid 1549570] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8954991] [evidence TAS]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]	Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2 [goid 4351] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10671565] [evidence IPI]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MGC161607; GAD65; MGC161605	MGC161607; GAD65; MGC161605
Homo sapiens	RefSeq	XM_928128.1	ILMN_41064	LOC643431	XM_928128.1	XM_928128.1		643431	88984854	XM_928128.1	LOC643431	XP_933221.1	ILMN_1813131	0004880440	S	477	ACATGGACAACATGTTCAAGAGCTACATCAACAACCTTAGGCGGCAGCTG	5	-	122765483-122765532		PREDICTED: Homo sapiens similar to Keratin, type II cytoskeletal 8 (Cytokeratin-8) (CK-8) (Keraton-8) (K8) (LOC643431), mRNA.					
Homo sapiens	RefSeq	XM_939635.1	ILMN_37816	LOC650549	XM_939635.1	XM_939635.1		650549	89039095	XM_939635.1	LOC650549	XP_944728.1	ILMN_1653077	0006980338	S	1	CCCCCGGTGGACCTAGCATGCTGGGCAAAAGCAGCTATCGTTTGGCTTGA					PREDICTED: Homo sapiens hypothetical protein LOC650549 (LOC650549), mRNA.					
Homo sapiens	RefSeq	NM_030795.2	ILMN_162349	STMN4	NM_030795.2	NM_030795.2		81551	21361946	NM_030795.2	STMN4	NP_110422.2	ILMN_1731397	0006860138	S	1083	GAGCCTCCAGGCACCATGTTGAGGAGAGATGAAAACCAGGGCGGTAGAAC	8	-	27149912-27149961	8p21.2a	Homo sapiens stathmin-like 4 (STMN4), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		RB3; MGC111012	MGC111012; RB3
Homo sapiens	RefSeq	XM_930921.1	ILMN_39834	LOC653066	XM_930921.1	XM_930921.1		653066	88954403	XM_930921.1	LOC653066	XP_936014.1	ILMN_1759870	0006200113	I	2244	CCCTGATCGTGACTGTTTTTCTCACGGCCACGTTCCTCCTGCTAACCTGC	2	+	138136-138185		PREDICTED: Homo sapiens similar to inhibitor of growth family, member 5, transcript variant 4 (LOC653066), mRNA.					
Homo sapiens	RefSeq	NM_005059.2	ILMN_27438	RLN2	NM_134441.1	NM_134441.1		6019	20143932	NM_134441.1	RLN2	NP_604390.1	ILMN_1744887	0004180711	A	390	GAAACTTATTCGCAATAGACAAAGTGAAGCCGCAGACAGCAGTCCTTCAG	9	-	5300216-5300265	9p24.1c	Homo sapiens relaxin 2 (RLN2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 6548702] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	bA12D24.1.1; H2; bA12D24.1.2; RLXH2	bA12D24.1.1; H2; bA12D24.1.2; RLXH2
Homo sapiens	RefSeq	NM_173464.1	ILMN_21894	L3MBTL4	NM_173464.2	NM_173464.2		91133	141801799	NM_173464.2	L3MBTL4	NP_775735.1	ILMN_1775646	0006280392	S	3890	CCCTGCCCATGGCCATCTGGATGGTTTTCATGTTGCTGTGTAAAGGAGGC				18p11.31b-p11.31a	Homo sapiens l(3)mbt-like 4 (Drosophila) (L3MBTL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	HsT1031	HsT1031
Homo sapiens	RefSeq	NM_170737.1	ILMN_27403	KCNJ15	NM_170737.1	NM_170737.1		3772	25777639	NM_170737.1	KCNJ15	NP_733933.1	ILMN_2396903	0002190349	A	2080	TGTCCCAGCCAGACTTACAGAATTGGGGTCTGTATCTTAACAAGAACCCC	21	+	38594966-38595015	21q22.13b	Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 15 (KCNJ15), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8995301] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8995301] [evidence TAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	 [goid 5242] [pmid 8995301] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA];  [goid 5242] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 5242] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIR1.3; IRKK; KIR4.2; MGC13584	KIR1.3; IRKK; KIR4.2; MGC13584
Homo sapiens	RefSeq	NR_024387.1	ILMN_371755	CXADRP2	NR_024387.1	NR_024387.1		646243	211971075	NR_024387.1	CXADRP2		ILMN_3247405	0007040202	S	1995	GGCCAGCCAGACCAAGGATGTAGTATCTCATAGTCCCCAACTAAATGCTG	15	-	22014834-22014883	15q11.2a	Homo sapiens coxsackie virus and adenovirus receptor pseudogene 2 (CXADRP2), non-coding RNA.					
Homo sapiens	RefSeq	XM_943783.1	ILMN_35494	SGSM1	NM_001039948.2	NM_001039948.2		129049	148612873	NM_001039948.2	SGSM1	NP_001035037.1	ILMN_1661939	0000110072	S	145	AGCGCTCGGAGCCATGGCCTCGGCCCCCGCGGAGGCGGAGACCCGACAGA	22	+	23532280-23532292:23532293-23532311:23532408-23532425	22q11.23c	Homo sapiens small G protein signaling modulator 1 (SGSM1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	MGC133298; RUTBC2; SGSM1; KIAA1941	
Homo sapiens	RefSeq	XM_938660.1	ILMN_35494	SGSM1	NM_001039948.2	NM_001039948.2		129049	148612873	NM_001039948.2	SGSM1	NP_001035037.1	ILMN_1762207	0000840364	A	6023	GTGTGTTTCTGTGTCCTGGAATTGGATGCGTGGGACTCGTTCTGTCCGCG	22	+	23652660-23652709	22q11.23c	Homo sapiens small G protein signaling modulator 1 (SGSM1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	MGC133298; RUTBC2; SGSM1; KIAA1941	
Homo sapiens	RefSeq	NM_006070.4	ILMN_8251	TFG	NM_001007565.1	NM_001007565.1		10342	56090138	NM_001007565.1	TFG	NP_001007566.1	ILMN_1812474	0000870176	A	1301	ATGCGCGTAACCGTCCTCCCTTTGGTCAGGGCTATACCCAACCTGGACCT	3	+	100467314-100467363	3q12.2a	Homo sapiens TRK-fused gene (TFG), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7565764] [evidence NAS]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	TF6; FLJ36137; TRKT3	TF6; FLJ36137; TRKT3
Homo sapiens	RefSeq	NM_017831.2	ILMN_16957	RNF125	NM_017831.3	NM_017831.3		54941	115387109	NM_017831.3	RNF125	NP_060301.2	ILMN_1747192	0002970703	S	875	CGGAGGCCTGTGTTCTGTCCACTTTGCCGTTTAATACCCGATGAGAATCC	18	+	27879682-27879693:27899863-27899900	18q12.1e	Homo sapiens ring finger protein 125 (RNF125), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20456; MGC21737; TRAC1	FLJ20456; MGC21737
Homo sapiens	RefSeq	NM_182851.1	ILMN_173981	CCNB1IP1	NM_182851.1	NM_182851.1		57820	33519437	NM_182851.1	CCNB1IP1	NP_878271.1	ILMN_2260833	0003130095	I	431	GCAATGGTGCGATCTCGGCTCACTGCAACCTTTGCCTCGTGGGTTCAAGT	14	-	20786546-20786595	14q11.2b	Homo sapiens cyclin B1 interacting protein 1 (CCNB1IP1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12612082] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C14orf18; HEI10	C14orf18; HEI10
Homo sapiens	RefSeq	NM_182851.1	ILMN_173981	CCNB1IP1	NM_182851.1	NM_182851.1		57820	33519437	NM_182851.1	CCNB1IP1	NP_878271.1	ILMN_2347349	0000510114	A	1480	TTGAGCCACGCATAGTGTCACGCACCTGTGATCCCAGCTACTTAGGAGGT	14	-	20779662-20779708:20779709-20779711	14q11.2b	Homo sapiens cyclin B1 interacting protein 1 (CCNB1IP1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12612082] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C14orf18; HEI10	C14orf18; HEI10
Homo sapiens	RefSeq	XM_937624.1	ILMN_162103	OSR2	XM_001126824.1	XM_001126824.1		116039	113420473	XM_001126824.1	OSR2	XP_001126824.1	ILMN_1654732	0000110079	I	1040	GAATCTCCACACAAATGTCCCACATGTGGAAGAACCTTTAATCAGAGAAG				8q22.2a	PREDICTED: Homo sapiens odd-skipped related 2 (Drosophila) (OSR2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_053001.1	ILMN_162103	OSR2	XM_001126824.1	XM_001126824.1		116039	113420473	XM_001126824.1	OSR2	XP_001126824.1	ILMN_1737715	0005420452	A	1301	ATCCCTAGCCCTTCACTGACCCCAGCTCTTCCCTTGCTGCAGCCGCACCT				8q22.2a	PREDICTED: Homo sapiens odd-skipped related 2 (Drosophila) (OSR2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		FLJ90037
Homo sapiens	RefSeq	XM_001722854.1	ILMN_345090	LOC100129717	XM_001722854.1	XM_001722854.1		100129717	169173204	XM_001722854.1	LOC100129717	XP_001722906.1	ILMN_3264629	0000110131	M	756	TCATAGCGCGCCTGCAGGTTGCGCAGGTAAGCTGAGCGTGCGGTGCTGTA				8p21.2c	PREDICTED: Homo sapiens hypothetical protein LOC100129717 (LOC100129717), mRNA.					
Homo sapiens	RefSeq	XM_001722854.1	ILMN_345090	LOC100129717	XM_001722854.1	XM_001722854.1		100129717	169173204	XM_001722854.1	LOC100129717	XP_001722906.1	ILMN_3188162	0004540438	A	47	GGAGCACACTCCCAGACTACAGTGGCGCCCGCACTCACGCCCTTCAAGTG				8p21.2c	PREDICTED: Homo sapiens hypothetical protein LOC100129717 (LOC100129717), mRNA.					
Homo sapiens	RefSeq	NM_001039656.1	ILMN_46873	MTL5	NM_001039656.1	NM_001039656.1		9633	89111118	NM_001039656.1	MTL5	NP_001034745.1	ILMN_2389528	0002360121	A	988	CGGTAGTCAACGGGTCTGCTTTCCCCTCGGGATCAACTCTTCCAGGACCA	11	-	68506187-68506236	11q13.2b	Homo sapiens metallothionein-like 5, testis-specific (tesmin) (MTL5), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The regulation of the levels, transport, and metabolism of metal ions within a cell or between a cell and its external environment [goid 6875] [pmid 10191092] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10191092] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus [goid 10038] [pmid 10191092] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [pmid 10191092] [evidence TAS]	TESMIN; MTLT; CXCDC2	TESMIN; MTLT; CXCDC2
Homo sapiens	RefSeq	XM_001725745.1	ILMN_347279	LOC100130855	XM_001725745.1	XM_001725745.1		100130855	169208909	XM_001725745.1	LOC100130855	XP_001725797.1	ILMN_3190707	0000430612	A	93	TCCGGGCCACTGTTCTCAGGCTACAGAACAAGGAAGAAGGAGCAGTGGTC				15q22.31a	PREDICTED: Homo sapiens hypothetical protein LOC100130855 (LOC100130855), mRNA.					
Homo sapiens	RefSeq	XM_926231.1	ILMN_36679	P704P	XM_926231.1	XM_926231.1		641455	89037242	XM_926231.1	P704P	XP_931324.1	ILMN_1793950	0007100392	S	704	GTTTCACCACCATGGCCGAGCAGGAAATCGTGCGTGACATCACAGAGAAG	14	-	19058193-19058242	14q11.1d	PREDICTED: Homo sapiens prostate-specific P704P (P704P), mRNA.					
Homo sapiens	RefSeq	NM_001008749.1	ILMN_166166	RAB19	NM_001008749.1	NM_001008749.1		401409	56847627	NM_001008749.1	RAB19	NP_001008749.1	ILMN_1785297	0004060273	S	734	TGGACTCCAGCCCCGTTCTTATGGCCCAGGGTCCAAGTGAAAAGACCCAC	7	+	139772358-139772407	7q34c	Homo sapiens RAB19, member RAS oncogene family (RAB19), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAB19B	RAB19B
Homo sapiens	RefSeq	NM_002784.2	ILMN_17742	PSG9	NM_002784.2	NM_002784.2		5678	21314634	NM_002784.2	PSG9	NP_002775.2	ILMN_1801776	0004120243	S	404	TCCAACGCATCCCTGCTGATCCAGAATGTCACCCGGAAGGATGCAGGAAC	19	-	48463849-48463898	19q13.31a	Homo sapiens pregnancy specific beta-1-glycoprotein 9 (PSG9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 1690992] [evidence TAS]		PSG11	PSG11
Homo sapiens	Unigene	Hs.122133	ILMN_75832	HS.122133	Hs.122133		Hs.122133		3423402	AI084979			ILMN_1840508	0004250022	S	264	CGCTGACATGGTCTCAGCCATACTTGCTGATTCCCTTGGAAGGGTGGCTC	2	+	64330278-64330327		ow88b03.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:1653869 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000086.1	ILMN_169963	CLN3	NM_001042432.1	NM_001042432.1		1201	109698600	NM_001042432.1	CLN3	NP_001035897.1	ILMN_1669281	0000520630	S	1629	GGGCTCCTGGCTTTGCCTCTGCATGACTTCCTCTGCCAGCTCTCCTGATA	16	-	28488834-28488836:28488837-28488883	16p11.2e	Homo sapiens ceroid-lipofuscinosis, neuronal 3 (CLN3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 10191111] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9949212] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 12134079] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10191116] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10191116] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8980123] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 15240864] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10191111] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15240864] [evidence IDA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [pmid 15240864] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 15240864] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15240864] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10191116] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 15240864] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [pmid 11590129] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [pmid 10332042] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10191112] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 12706816] [evidence IDA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [pmid 10332042] [evidence IDA]; Any constituent part of cytoplasmic vesicle, a vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 44433] [evidence IEA]	The fusion of an autophagic vacuole with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole [goid 46] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IEA]; The chemical reactions and pathways involving globosides, globotetraosylceramides, ceramides containing a core structure of GalNAc-beta-(1,3)-Gal-alpha(1,4)Glc(I). Globosides are the major neutral glycosphingolipid in normal kidneys and erythrocytes [goid 1575] [pmid 15240864] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 8980123] [evidence TAS]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative [goid 6678] [pmid 15240864] [evidence IMP]; The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6681] [pmid 15240864] [evidence IMP]; The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 15240864] [evidence IMP]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 15471887] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]; Any process that reduces the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion [goid 7042] [pmid 11722572] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [pmid 16251196] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of macroautophagy [goid 16242] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 10740217] [evidence NAS]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor, followed by the movement of ions through a channel in the receptor complex [goid 35235] [evidence IEA]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [pmid 10924275] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]; Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion [goid 51453] [pmid 10924275] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within the cytosol of a cell or between the cytosol and its surroundings [goid 51480] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 8980123] [evidence TAS]	MGC102840; BTS	BTS; MGC102840
Homo sapiens	RefSeq	XM_942165.1	ILMN_46806	LOC652624	XM_942165.1	XM_942165.1		652624	89063332	XM_942165.1	LOC652624	XP_947258.1	ILMN_1672961	0002120164	S	1	ATGGGGTACTTTAGGGCTGTGCTGAAGTTTGCTGCTGCCACTGGAGCCAC				7q22.1d	PREDICTED: Homo sapiens similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (LOC652624), mRNA.					
Homo sapiens	Unigene	Hs.553187	ILMN_111275	HS.553187	Hs.553187		Hs.553187		34534477	AK127526			ILMN_1891067	0006620390	S	3229	GGAGACTGTCCACATCCGACATTTCACCGACACCTCAAGGACACTTCTAC	1	-	208918618-208918667		Homo sapiens cDNA FLJ45619 fis, clone BRTHA3027318					
Homo sapiens	RefSeq	NM_021097.1	ILMN_29304	SLC8A1	NM_021097.2	NM_021097.2		6546	115529447	NM_021097.2	SLC8A1	NP_066920.1	ILMN_1699520	0006450288	S	2844	CCGGACTGCCAAGCTCCTCACATCCTGCCTCTTTGTGCTCCTATGGCTCT	2	-	40509887-40509936	2p22.1b	Homo sapiens solute carrier family 8 (sodium/calcium exchanger), member 1 (SLC8A1), transcript variant A, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1374913] [evidence TAS]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IEA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 1374913] [evidence TAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 1374913] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 1374913] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the transfer of sodium ions (Na+) from one side of a membrane to the other [goid 15081] [pmid 1374913] [evidence TAS]; Catalysis of the transfer of calcium (Ca) ions from one side of a membrane to the other [goid 15085] [pmid 1374913] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NCX1; DKFZp779F0871; FLJ43417; FLJ37694; MGC119581	NCX1; DKFZp779F0871; MGC119581
Homo sapiens	RefSeq	NM_181670.2	ILMN_28640	ANKS1B	NM_181670.2	NM_181670.2		56899	50511946	NM_181670.2	ANKS1B	NP_858056.2	ILMN_1758392	0002350201	I	2561	AAATACTGGTGATGCTCCCTAGAGCAGGAGGCCCGGAAGTGCTGACGCAG	12	-	99138641-99138690	12q23.1c-q23.1d	Homo sapiens ankyrin repeat and sterile alpha motif domain containing 1B (ANKS1B), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]			MGC26087; ANKS2; AIDA; cajalin-2; EB-1; AIDA-1	MGC26087; ANKS2; AIDA; cajalin-2; EB-1; AIDA-1
Homo sapiens	RefSeq	NM_172005.1	ILMN_13833	WFDC13	NM_172005.1	NM_172005.1		164237	25188180	NM_172005.1	WFDC13	NP_742002.1	ILMN_1723113	0006110379	S	992	GCATGTAGCACCACCTGAGCCAGAAACTGCAGAGGACATGACAGTGTGGC	20	+	43770490-43770539	20q13.12b	Homo sapiens WAP four-disulfide core domain 13 (WFDC13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	WAP13; dJ601O1.3; C20orf138	C20orf138; WAP13; dJ601O1.3
Homo sapiens	RefSeq	XM_936152.1	ILMN_38568	LOC642072	XM_936152.1	XM_936152.1		642072	88998799	XM_936152.1	LOC642072	XP_941245.1	ILMN_1720255	0000020674	S	213	CCAGAAGAACCTCTTGGGCTGCTTGCGGGGTCTGTTGGACACCTACTGCA					PREDICTED: Homo sapiens similar to HLA class II histocompatibility antigen, DRB1-4 beta chain precursor (MHC class I antigen DRB1*4) (DR-4) (DR4) (LOC642072), mRNA.					
Homo sapiens	RefSeq	NM_199424.1	ILMN_28029	WWP2	NM_199424.1	NM_199424.1		11060	40806210	NM_199424.1	WWP2	NP_955456.1	ILMN_1668847	0000450431	I	165	TACCGCCTCCTCCCCGTCGCTCTGCCTTTTCCAAAACTCACTTGGGCCCT	16	+	68516566-68516615	16q22.1e	Homo sapiens WW domain containing E3 ubiquitin protein ligase 2 (WWP2), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 9647693] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9169421] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which a virion enters a host cell, including virion attachment and penetration [goid 46718] [pmid 12450395] [evidence TAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9169421] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9647693] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	WWp2-like; AIP2	WWp2-like; AIP2
Homo sapiens	RefSeq	NM_004397.3	ILMN_25649	DDX6	NM_004397.3	NM_004397.3		1656	21536329	NM_004397.3	DDX6	NP_004388.1	ILMN_1777340	0005560209	S	3897	CAGATGCCTCCTGATGGGACATAGCCCTAACTCCTTAACAACTGTAGCAA	11	-	118125862-118125911	11q23.3e	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (DDX6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A dense aggregation in the cytosol composed of proteins and RNAs that appear when the cell is under stress [goid 10494] [pmid 17392519] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a RNA helix [goid 3724] [pmid 1579499] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17392519] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	P54; HLR2; FLJ36338; RCK	P54; HLR2; FLJ36338; RCK
Homo sapiens	RefSeq	XM_930953.1	ILMN_181553	LOC727851	XM_001126260.1	XM_001126260.1		727851	113413169	XM_001126260.1	LOC727851	XP_001126260.1	ILMN_1797281	0004890482	I	194	AAGGACTCAGATGCAGGGTCTTCTCTGCTCCCCGTCACACAGAGGGTGGC	2	-	112908292-112908341	2q13d	PREDICTED: Homo sapiens similar to RAN binding protein 2, transcript variant 6 (LOC727851), mRNA.					
Homo sapiens	RefSeq	XM_944646.1	ILMN_39723	LOC651401	XM_944646.1	XM_944646.1		651401	88958122	XM_944646.1	LOC651401	XP_949739.1	ILMN_1672600	0005390243	S	1	ATGCCTGAGCCTCCCCCTACTGCCGTGGGCTCCTATGTGGCCCAAGCCTC					PREDICTED: Homo sapiens hypothetical protein LOC651401 (LOC651401), mRNA.					
Homo sapiens	RefSeq	NM_145042.2	ILMN_307745	MGC16703	NR_003608.1	NR_003608.1		113691	153070786	NR_003608.1	MGC16703		ILMN_1652940	0002470681	S	1453	CCCCTGAAGGCCCGCATCCTTTATGGAGACAACCCCTTTTCACGTCAGCT	22	-	21362953-21363002	22q11.21e	Homo sapiens tubulin, alpha pseudogene (MGC16703), non-coding RNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_003151.2	ILMN_175131	STAT4	NM_003151.2	NM_003151.2		6775	21618332	NM_003151.2	STAT4	NP_003142.1	ILMN_1785202	0007320370	S	2409	CCCATGTCTCCAAGTGTGTATGCGGTGTTGAGAGAAAACCTGAGTCCCAC	2	-	191895713-191895762	2q32.3a	Homo sapiens signal transducer and activator of transcription 4 (STAT4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9284918] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9284918] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9989503] [evidence IPI]		
Homo sapiens	RefSeq	XM_927666.1	ILMN_40767	LOC644544	XM_927666.1	XM_927666.1		644544	89040466	XM_927666.1	LOC644544	XP_932759.1	ILMN_1696468	0004150176	S	151	TAGTTCAGGATCTGAAGGAGCTCTGCCTTTGGAATGCATGGGAGATAGAG	16	-	56755202-56755251		PREDICTED: Homo sapiens hypothetical protein LOC644544 (LOC644544), mRNA.					
Homo sapiens	Unigene	Hs.308351	ILMN_85723	HS.308351	Hs.308351		Hs.308351		27833860	BX106045			ILMN_1851396	0006060673	S	110	GTCACTTTATTCATGTCCCCAGAACCCTAGGAAAGCATCAGCATTCAAGG	1	+	90895282-90895331		BX106045 NCI_CGAP_Brn35 Homo sapiens cDNA clone IMAGp998O244859, mRNA sequence					
Homo sapiens	RefSeq	NM_173541.1	ILMN_25707	C10ORF91	NM_173541.1	NM_173541.1		170393	27734914	NM_173541.1	C10orf91	NP_775812.1	ILMN_1802702	0006250204	S	843	TCTAACCACAAAGGAGGAAAAGAGAAGACCACCCTTGCCCCAGTCCGGCC	10	+	134111899-134111926:134112494-134112515	10q26.3e	Homo sapiens chromosome 10 open reading frame 91 (C10orf91), mRNA.				bA432J24.4; RP11-432J24.4	bA432J24.4; RP11-432J24.4
Homo sapiens	Unigene	Hs.572761	ILMN_124942	HS.572761	Hs.572761		Hs.572761		62640121	DN831478			ILMN_1884041	0002640102	S	267	CCAGCCATGACCAGGACAGACTTCACAGCTCTCATGCCAAAGTCGTAGTG	2	-	84721160-84721209		MGC_EST_41324 BD# 636643 Human Total RNA Master Panel II Homo sapiens cDNA, mRNA sequence					
Homo sapiens	Unigene	Hs.549989	ILMN_110121	HS.549989	Hs.549989		Hs.549989		10438414	AK025793			ILMN_1880280	0001500309	S	3313	CCGTGTGTCAGGGAGCTGAGTGGAGGCTGAAAGAGGATGGAACACTTCCC	3	-	71702234-71702283		Homo sapiens cDNA: FLJ22140 fis, clone HEP20977					
Homo sapiens	RefSeq	NM_198078.1	ILMN_18577	C21ORF121	NM_198078.1	NM_198078.1		150142	37620213	NM_198078.1	C21orf121	NP_932344.1	ILMN_1697872	0006980167	S	623	GCCTCTTTGGAGCATACCCACTGATGGTGGTTCACAAGCTACCCACGCCC	21	+	42317944-42317993	21q22.3a	Homo sapiens chromosome 21 open reading frame 121 (C21orf121), mRNA.				PRED87	PRED87
Homo sapiens	RefSeq	NM_001007468.1	ILMN_20096	SMARCB1	NM_001007468.1	NM_001007468.1		6598	55956800	NM_001007468.1	SMARCB1	NP_001007469.1	ILMN_2403458	0000130241	A	1156	TACGCCTTCAGCGAGAACCCTCTGCCCACAGTGGAGATTGCCATCCGGAA	22	+	22497592-22497602:22505759-22505797	22q11.23a	Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), transcript variant 2, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IEA]; A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1741] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11430827] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7801128] [evidence TAS]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [pmid 8895581] [evidence IDA]	The hatching of the cellular blastocyst from the zona pellucida [goid 1835] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 7801128] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [pmid 7801128] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process involved in the replication of a retroviral genome. Retroviruses use RNA as their nucleic acid and reverse transcriptase to copy their genome into the DNA of the host cells chromosomes [goid 45090] [pmid 14963118] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15985610] [evidence IPI]	Sfh1p; RDT; hSNFS; SNF5; Snr1; SNF5L1; INI1; BAF47	Sfh1p; RDT; hSNFS; SNF5; Snr1; SNF5L1; INI1; BAF47
Homo sapiens	RefSeq	NM_001007468.1	ILMN_20096	SMARCB1	NM_001007468.1	NM_001007468.1		6598	55956800	NM_001007468.1	SMARCB1	NP_001007469.1	ILMN_1758823	0000150021	A	1460	GTGGAGTGGGGGCTTCCAGGTGGCCCTTCCCGGCACACATTCCATTTGTT	22	+	22506489-22506538	22q11.23a	Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 (SMARCB1), transcript variant 2, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IEA]; A structure found in a male mammalian spermatocyte containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1741] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11430827] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7801128] [evidence TAS]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [pmid 8895581] [evidence IDA]	The hatching of the cellular blastocyst from the zona pellucida [goid 1835] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 7801128] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [pmid 7801128] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process involved in the replication of a retroviral genome. Retroviruses use RNA as their nucleic acid and reverse transcriptase to copy their genome into the DNA of the host cells chromosomes [goid 45090] [pmid 14963118] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15985610] [evidence IPI]	Sfh1p; RDT; hSNFS; SNF5; Snr1; SNF5L1; INI1; BAF47	Sfh1p; RDT; hSNFS; SNF5; Snr1; SNF5L1; INI1; BAF47
Homo sapiens	RefSeq	XM_001720466.1	ILMN_334831	LOC100132859	XM_001720466.1	XM_001720466.1		100132859	169184224	XM_001720466.1	LOC100132859	XP_001720518.1	ILMN_3235556	0002230674	S	369	TGGTGTGGCTTCATTTCTCAGAGAAGAGCCGTGAAAAGATACAAGCATCT	9	+	67383023-67383072	9q12h	PREDICTED: Homo sapiens hypothetical protein LOC100132859 (LOC100132859), mRNA.					
Homo sapiens	RefSeq	XM_372630.2	ILMN_35885	LOC390712	XM_372630.2	XM_372630.2		390712	89040320	XM_372630.2	LOC390712	XP_372630.2	ILMN_1656882	0006280136	A	107	ACCTAAAACTCTCCGGTGCAGCCTCTGGATTCACCGTCGGTAGCTGGTAC	16	+	33512939-33512988	16p11.2a	PREDICTED: Homo sapiens similar to Ig heavy chain V-III region VH26 precursor (LOC390712), mRNA.					
Homo sapiens	RefSeq	NM_016639.1	ILMN_11654	TNFRSF12A	NM_016639.1	NM_016639.1		51330	7706185	NM_016639.1	TNFRSF12A	NP_057723.1	ILMN_1689004	0006510377	S	634	CAGAAAGGGAGCCTCACGCTGGCTCACACAAAACAGCTGACACTGACTAA	16	+	3012033-3012082	16p13.3d	Homo sapiens tumor necrosis factor receptor superfamily, member 12A (TNFRSF12A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10551889] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10551889] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The formation of adhesions that stabilize protrusions at the leading edge of a migrating cell; involves integrin activation, clustering, and the recruitment of structural and signaling components to nascent adhesions [goid 6931] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of axon extension [goid 45773] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD266; TWEAKR; FN14	CD266; TWEAKR; FN14
Homo sapiens	RefSeq	NM_030773.2	ILMN_19869	TUBB1	NM_030773.2	NM_030773.2		81027	41152077	NM_030773.2	TUBB1	NP_110400.1	ILMN_1710280	0001050347	S	3248	GACTTACAGCCTGCGATTATACAAGGATTTACACATGCTTCCTCTGGTGC	20	+	57034856-57034905	20q13.32b	Homo sapiens tubulin, beta 1 (TUBB1), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart [goid 51225] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	dJ543J19.4	dJ543J19.4
Homo sapiens	RefSeq	NM_001037232.2	ILMN_1779	ZNF829	NM_001037232.2	NM_001037232.2		374899	117956400	NM_001037232.2	ZNF829	NP_001032309.2	ILMN_2157843	0002350400	S	1595	GGAATGTGGAAAGGCTTTTGGTAGTCGCTCTGACCTCATTCGCCATGAGG	19	-	42074250-42074299	19q13.12b	Homo sapiens zinc finger protein 829 (ZNF829), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129867; MGC129866; DKFZp686K21248; FLJ27459	MGC129867; MGC129866; DKFZp686K21248; FLJ27459
Homo sapiens	RefSeq	XM_927471.1	ILMN_1779	ZNF829	NM_001037232.2	NM_001037232.2		374899	117956400	NM_001037232.2	ZNF829	NP_001032309.2	ILMN_1718259	0002680315	S	149	GCCTGGGCCCACCCGAAACGGCTGCTCCCTCAACTCTCAACATCCAGCCG	19	-	42098832-42098881	19q13.12b	Homo sapiens zinc finger protein 829 (ZNF829), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129867; MGC129866; DKFZp686K21248; FLJ27459	
Homo sapiens	RefSeq	XM_945945.1	ILMN_1779	ZNF829	NM_001037232.2	NM_001037232.2		374899	117956400	NM_001037232.2	ZNF829	NP_001032309.2	ILMN_1712605	0007050059	A	623	GGAACAAGGAAAAGAGCCCTGGATGGTTGATAGAGAGCTGACTAGAGGCC	19	-	42090679-42090728	19q13.12b	Homo sapiens zinc finger protein 829 (ZNF829), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129867; MGC129866; DKFZp686K21248; FLJ27459	
Homo sapiens	RefSeq	NM_001018022.1	ILMN_181100	LOC389286	NM_001018022.1	NM_001018022.1		389286	65283615	NM_001018022.1	LOC389286	NP_001018022.1	ILMN_2170625	0006180445	S	2	TGCGGCCTTCCGCAGTGTTTGTGTCCCTGGGTACTTAAGATTAGGGAGTG	2	+	201855047-201855096	2q33.1f	Homo sapiens similar to FKSG62 (LOC389286), mRNA.				FKSG69	FKSG69
Homo sapiens	RefSeq	NM_017760.4	ILMN_1155	LUZP5	NM_017760.4	NM_017760.4		54892	40255236	NM_017760.4	LUZP5	NP_060230.4	ILMN_1669826	0003840114	S	4641	GCACATCGCCGCCACACCCAGCTCATTTTTGTATTAGTGGAGACAGGGCT	7	-	158125811-158125860	7q36.3e	Homo sapiens leucine zipper protein 5 (LUZP5), mRNA.				hCAP-G2; MTB; FLJ20311; CAP-G2	hCAP-G2; MTB; FLJ20311; CAP-G2
Homo sapiens	RefSeq	NM_001014373.1	ILMN_11964	C19ORF31	NM_001014373.1	NM_001014373.1		404664	62122870	NM_001014373.1	C19orf31	NP_001014395.1	ILMN_2233279	0004730356	S	2226	CAAGATCGCGCCATTGCACTCCAGCCTGGGCAACAAAAGCAAAACTCAGT	19	-	4858744-4858793	19p13.3c	Homo sapiens chromosome 19 open reading frame 31 (C19orf31), mRNA.				FLJ40719	FLJ40719
Homo sapiens	RefSeq	NM_001014373.1	ILMN_11964	C19ORF31	NM_001014373.1	NM_001014373.1		404664	62122870	NM_001014373.1	C19orf31	NP_001014395.1	ILMN_1782782	0003180707	S	1751	ATGCGTCTCTAGACCCCCACGTCCTCGCCCCCAGGATCTGTGAATACAGT	19	-	4859219-4859268	19p13.3c	Homo sapiens chromosome 19 open reading frame 31 (C19orf31), mRNA.				FLJ40719	FLJ40719
Homo sapiens	RefSeq	NM_005855.2	ILMN_16245	RAMP1	NM_005855.2	NM_005855.2		10267	73486764	NM_005855.2	RAMP1	NP_005846.1	ILMN_1764754	0007050064	S	717	GAGTCCAGAGTAGCCGAGGCTCTGGTATTAACCTGGAAGCCCCCCTGGCT	2	+	238485302-238485351	2q37.3b	Homo sapiens receptor (G protein-coupled) activity modifying protein 1 (RAMP1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9620797] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9620797] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9620797] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 9620797] [evidence TAS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]		
Homo sapiens	RefSeq	NM_030759.1	ILMN_162734	LOC730820	XM_001127763.1	XM_001127763.1		730820	113420481	XM_001127763.1	LOC730820	XP_001127763.1	ILMN_1719344	0000380327	S	1088	GGTGGACTGTGGGAGCAGAGGCATTGCCAGGACTTGGGAAACAGTCACTG					PREDICTED: Homo sapiens similar to nuclear receptor binding factor 2 (LOC730820), mRNA.					FLJ30395; DKFZp564C1664; COPR2; COPR1; NRBF-2
Homo sapiens	RefSeq	NM_019613.2	ILMN_10751	WDR45L	NM_019613.2	NM_019613.2		56270	19923554	NM_019613.2	WDR45L	NP_062559.1	ILMN_1685763	0002600646	S	1780	GCCTGTGGTCTTCTCCGTACCCGCAACGTGGTCATCTGTGCCCGTGACGT	17	-	78166351-78166400	17q25.3h	Homo sapiens WDR45-like (WDR45L), mRNA.				WIPI-3; WIPI3	WIPI-3; WIPI3
Homo sapiens	RefSeq	NM_012245.2	ILMN_7530	SNW1	NM_012245.2	NM_012245.2		22938	18860912	NM_012245.2	SNW1	NP_036377.1	ILMN_1688413	0000830189	S	1737	TCTGGGTGCCAGATCCCAGCACTACTTTTTATTACTGGAGAAATGGGGGG	14	-	78184282-78184331	14q24.3d	Homo sapiens SNW domain containing 1 (SNW1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9569025] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 15194481] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 15194481] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9632709] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10713164] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9569025] [evidence TAS]; Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [pmid 10713164] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16102918] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10713164] [evidence IPI]	SKIIP; Prp45; SKIP; NCOA-62; Bx42; MGC119379; PRPF45	SKIIP; Prp45; SKIP; NCOA-62; Bx42; MGC119379; PRPF45
Homo sapiens	RefSeq	NM_000946.2	ILMN_20991	PRIM1	NM_000946.2	NM_000946.2		5557	41349493	NM_000946.2	PRIM1	NP_000937.1	ILMN_1694502	0006200390	S	931	ACCCTGGCTGGAGTGGGAGATTATGCTCCAGTACTGTTTTCCACGGCTGG	12	-	57135284-57135333	12q13.3a	Homo sapiens primase, DNA, polypeptide 1 (49kDa) (PRIM1), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 6693436] [evidence EXP]; A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [pmid 8026492] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. Catalyzed by a DNA-directed RNA polymerase that forms a complex with alpha DNA polymerase [goid 3896] [pmid 8026492] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC12308; p49	MGC12308; p49
Homo sapiens	RefSeq	NM_022366.1	ILMN_24706	TFB2M	NM_022366.1	NM_022366.1		64216	11641288	NM_022366.1	TFB2M	NP_071761.1	ILMN_2067708	0005270296	S	1299	CCCTGGAAGATAGGTAGCAACTAGACTGTCGTTTTTGGTGGAGCGGTTCA	1	-	244770921-244770955:244770956-244770970	1q44d	Homo sapiens transcription factor B2, mitochondrial (TFB2M), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 12068295] [evidence IDA]	The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a mitochondrial DNA template, usually by a specific mitochondrial RNA polymerase [goid 6390] [pmid 12068295] [evidence IDA]	Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 12068295] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ22661; Hkp1; FLJ23182	FLJ22661; Hkp1; FLJ23182
Homo sapiens	RefSeq	NM_022366.1	ILMN_24706	TFB2M	NM_022366.1	NM_022366.1		64216	11641288	NM_022366.1	TFB2M	NP_071761.1	ILMN_2067709	0000990100	S	1421	GTCTTGCACAAGCCAGGCAGATCATTTCTCCTAAGCTGATATCATTGGCT	1	-	244770799-244770848	1q44d	Homo sapiens transcription factor B2, mitochondrial (TFB2M), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 12068295] [evidence IDA]	The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a mitochondrial DNA template, usually by a specific mitochondrial RNA polymerase [goid 6390] [pmid 12068295] [evidence IDA]	Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 12068295] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ22661; Hkp1; FLJ23182	FLJ22661; Hkp1; FLJ23182
Homo sapiens	RefSeq	XM_001716779.1	ILMN_339902	LOC100128989	XM_001716779.1	XM_001716779.1		100128989	169216693	XM_001716779.1	LOC100128989	XP_001716831.1	ILMN_3182304	0003060762	A	152	TCAAGTTTAGATCTACCACAGGTAGTCACATGACAAAGAAAGCATCAGCC	X	-	74675011-74675060	Xq13.3b	PREDICTED: Homo sapiens similar to hCG2041183 (LOC100128989), partial mRNA.					
Homo sapiens	RefSeq	XM_927939.1	ILMN_43691	LOC644844	XM_927939.2	XM_927939.2		644844	113425212	XM_927939.2	LOC644844	XP_933032.2	ILMN_1661078	0005960328	S	103	CCTGCCCCTGCTCTGCACTCTCAGGTATTCCCTGCTCTTACTCCAAAAAG	15	+	38430532-38430555:38432725-38432750	15q15.1a	PREDICTED: Homo sapiens hypothetical LOC644844 (LOC644844), mRNA.					
Homo sapiens	Unigene	Hs.554608	ILMN_112055	HS.554608	Hs.554608		Hs.554608		561211	Z38819			ILMN_1907648	0005550242	S	184	TTGGCCAGGGGAGCAAGGTGGAGGTTGAGCCTCCGGGTGTGGTCAGGTGT	17	-	41283605-41283654		HSC0QD082 normalized infant brain cDNA Homo sapiens cDNA clone c-0qd08 3, mRNA sequence					
Homo sapiens	RefSeq	NM_024727.1	ILMN_14959	LRRC31	NM_024727.2	NM_024727.2		79782	113205084	NM_024727.2	LRRC31	NP_079003.2	ILMN_1803528	0005310328	S	2093	TGGTACTGCAACTGCTTTCCTCTTGCCCAGAAATGTTTTGCCTCTTCTTT	3	-	171040057-171040106	3q26.2b	Homo sapiens leucine rich repeat containing 31 (LRRC31), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ40019; FLJ23259	FLJ40019; FLJ23259
Homo sapiens	RefSeq	XM_932504.1	ILMN_36003	LOC642918	XM_932504.1	XM_932504.1		642918	89035777	XM_932504.1	LOC642918	XP_937597.1	ILMN_1703425	0006110040	I	121	ATACGGGACATACTTTATTCAGCTGGGTGCTGAAAAAGAATCTTGGAAAT	12	+	125787650-125787655:125793239-125793282		PREDICTED: Homo sapiens hypothetical protein LOC642917, transcript variant 2 (LOC642918), mRNA.					
Homo sapiens	RefSeq	XM_001132072.2	ILMN_175267	LOC730011	XM_001132072.2	XM_001132072.2		730011	169207068	XM_001132072.2	LOC730011	XP_001132072.1	ILMN_3303993	0003420520	M	373	GGCCTCACATTCTGGCAGTCTCCACGAGCCAAGAGGTGTCCATGCCAAGT	14	-	74775322-74775371	14q24.3b	PREDICTED: Homo sapiens hypothetical LOC730011 (LOC730011), mRNA.					
Homo sapiens	RefSeq	NM_173825.2	ILMN_172352	RABL3	NM_173825.3	NM_173825.3		285282	115529441	NM_173825.3	RABL3	NP_776186.2	ILMN_1662306	0005860110	S	348	GCGTCGTTGGTCATTGGAAGCTCTCAACAGGGATTTGGTGCCAACTGGAG	3	-	121907552-121907601	3q13.33b	Homo sapiens RAB, member of RAS oncogene family-like 3 (RABL3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	MGC23920	MGC23920
Homo sapiens	RefSeq	NM_001009611.1	ILMN_20890	PRAMEF4	NM_001009611.1	NM_001009611.1		400735	59958372	NM_001009611.1	PRAMEF4	NP_001009611.1	ILMN_2221769	0001190240	S	1155	TGTGGCATCATAGACTCCCAAGTCAACGCCATCTTGCCTGCCCTGAGCCG	1	-	12862255-12862304	1p36.21d	Homo sapiens PRAME family member 4 (PRAMEF4), mRNA.				RP5-845O24.6	RP5-845O24.6
Homo sapiens	RefSeq	NM_001009611.1	ILMN_20890	PRAMEF4	NM_001009611.1	NM_001009611.1		400735	59958372	NM_001009611.1	PRAMEF4	NP_001009611.1	ILMN_2221768	0004060142	S	1686	TGGATTCGATGGGACTTTGGGGACCTGTGTCCTGTAGAGTCGAAAATGGG	1	-	12861724-12861773	1p36.21d	Homo sapiens PRAME family member 4 (PRAMEF4), mRNA.				RP5-845O24.6	RP5-845O24.6
Homo sapiens	RefSeq	XM_001715698.1	ILMN_347643	LOC100133599	XM_001715698.1	XM_001715698.1		100133599	169172528	XM_001715698.1	LOC100133599	XP_001715750.1	ILMN_3233395	0002260390	I	657	GGTCTTCAGGCCCCTGAGAGAATCTGCATTTAACAGGGTCACAGTCACAG					PREDICTED: Homo sapiens hypothetical protein LOC100133599 (LOC100133599), mRNA.					
Homo sapiens	RefSeq	XM_001715698.1	ILMN_347643	LOC100133599	XM_001715698.1	XM_001715698.1		100133599	169172528	XM_001715698.1	LOC100133599	XP_001715750.1	ILMN_3290293	0005340086	M	44	CTGAGCTACAAATGGTTTCGTGTTCCCATATCAGTAAGCCATGTACCCAG					PREDICTED: Homo sapiens hypothetical protein LOC100133599 (LOC100133599), mRNA.					
Homo sapiens	RefSeq	NM_000893.2	ILMN_22281	KNG1	NM_000893.2	NM_000893.2		3827	38455404	NM_000893.2	KNG1	NP_000884.1	ILMN_1753729	0001450619	S	1504	GCAGAATCTTCACTCCAGGCACATAGCCCCAACCACCTCTGCCAGCAACC	3	+	187944276-187944325	3q27.3a	Homo sapiens kininogen 1 (KNG1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]	A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 11385996] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 11385996] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 11970955] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 16014619] [evidence IDA]; The process of renal water excretion [goid 30146] [pmid 11385996] [evidence TAS]; The process of renal sodium excretion [goid 30147] [pmid 11385996] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of blood coagulation [goid 30195] [pmid 11970955] [evidence IDA]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 12715893] [evidence NAS]	 [goid 4869] [evidence IEA];  [goid 4869] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 11290596] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 12911595] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 12911595] [evidence NAS];  [goid 4869] [evidence IEA]	kininogen; KNG; BDK	kininogen; KNG; BDK
Homo sapiens	Unigene	Hs.542573	ILMN_106378	HS.542573	Hs.542573		Hs.542573		3278427	AI039233			ILMN_1888546	0006660672	S	279	CCTTGAACCCTCACCTGTCCATAGCACCCACAGGAGCAAAAAGCACCACC	21	-	35433453-35433502		ox32e08.s1 Soares_total_fetus_Nb2HF8_9w Homo sapiens cDNA clone IMAGE:1658054 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016206.2	ILMN_25235	VGLL3	NM_016206.2	NM_016206.2		389136	56550034	NM_016206.2	VGLL3	NP_057290.2	ILMN_1714586	0000450626	S	9893	ATCTGTTCCCCTTTAAGCATGACACTCTATCCTTTCTTGTGGATCTTGCT	3	-	87070266-87070315	3p12.1a	Homo sapiens vestigial like 3 (Drosophila) (VGLL3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	VGL-3; DKFZp686O1845; VGL3; FLJ38507	VGL-3; DKFZp686O1845; VGL3; FLJ38507
Homo sapiens	RefSeq	NM_007273.3	ILMN_15515	PHB2	NM_007273.3	NM_007273.3		11331	31543548	NM_007273.3	PHB2	NP_009204.1	ILMN_1696087	0004060722	S	1073	GGGTAAGAAATGAGCCTAGTCACCAAGAACTCCACCCCCAGAGGAAGTGG	12	-	7074810-7074847:7074848-7074859	12p13.31d	Homo sapiens prohibitin 2 (PHB2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10359819] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10359819] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11302691] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 10359819] [evidence IDA]; Interacting selectively with an estrogen receptor [goid 30331] [pmid 10359819] [evidence NAS]	MGC117268; BCAP37; BAP; REA; p22; Bap37; PNAS-141	MGC117268; BCAP37; BAP; REA; p22; Bap37; PNAS-141
Homo sapiens	RefSeq	NM_003226.2	ILMN_6502	TFF3	NM_003226.2	NM_003226.2		7033	48928026	NM_003226.2	TFF3	NP_003217.2	ILMN_1811387	0007570484	S	608	GCCTGATGTCTTAACGAATAAAGGTCCCATGCTCCACCCGAGGACAGTTC	21	-	43732173-43732222	21q22.3b	Homo sapiens trefoil factor 3 (intestinal) (TFF3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8454642] [evidence TAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 8454642] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 8454642] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 9043862] [evidence TAS]		TFI; hP1.B; HITF; ITF	TFI; hP1.B; HITF; ITF
Homo sapiens	RefSeq	NM_005227.2	ILMN_18185	EFNA4	NM_005227.2	NM_005227.2		1945	33359684	NM_005227.2	EFNA4	NP_005218.1	ILMN_1665696	0001780278	I	619	GGGGACACTCCCAGCCCCCTCTGTCTCTTGCTATTACTGCTGCTTCTGAT	1	+	153308015-153308064	1q22a	Homo sapiens ephrin-A4 (EFNA4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8660976] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8660976] [evidence TAS]	 [goid 5005] [pmid 8660976] [evidence TAS]	EFL4; LERK4; MGC125826; EPLG4	EFL4; LERK4; MGC125826; EPLG4
Homo sapiens	RefSeq	NM_020389.1	ILMN_1294	TRPC7	NM_020389.1	NM_020389.1		57113	9966864	NM_020389.1	TRPC7	NP_065122.1	ILMN_1683909	0004900594	S	2488	GCTACTGGTGAGCTGGCAGACCTGATTCAACAACTCAGCGAGAAGTTTGG	5	-	135615240-135615289	5q31.2a	Homo sapiens transient receptor potential cation channel, subfamily C, member 7 (TRPC7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15757897] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]	TRP7	TRP7
Homo sapiens	RefSeq	XM_936970.1	ILMN_33937	LOC647910	XM_936970.1	XM_936970.1		647910	89040727	XM_936970.1	LOC647910	XP_942063.1	ILMN_1717013	0007050601	S	189	GGAAAACACTGAAGATGGAAAAGAACGTGAGCTCCCCAAGAGCGGGCGCC					PREDICTED: Homo sapiens similar to islet cell autoantigen 1 isoform 1 (LOC647910), mRNA.					
Homo sapiens	RefSeq	NM_198944.1	ILMN_183871	OR7C1	NM_198944.1	NM_198944.1		26664	39812354	NM_198944.1	OR7C1	NP_945182.1	ILMN_1729874	0006110070	S	680	GGATTTCCTCAGCTGGGAGAAAGCACAAAGCGTTTTCCACCTGTGGTTCC	19	-	14910219-14910268	19p13.12b	Homo sapiens olfactory receptor, family 7, subfamily C, member 1 (OR7C1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9268701] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	CIT-HSP-146E8; OR7C4; TPCR86; HSTPCR86P; OR19-5	CIT-HSP-146E8; OR7C4; TPCR86; HSTPCR86P; OR19-5
Homo sapiens	RefSeq	XM_927932.1	ILMN_37855	LOC644836	XM_927932.1	XM_927932.1		644836	89025131	XM_927932.1	LOC644836	XP_933025.1	ILMN_1752320	0002640041	S	91	TCTTTCCCCTGTGGGCCCCTCTCTGGTCCTGGGGTCCTGGATTGGACCCT	7	+	66461617-66461666		PREDICTED: Homo sapiens hypothetical protein LOC644836 (LOC644836), mRNA.					
Homo sapiens	RefSeq	XM_001131072.1	ILMN_163452	LOC729698	XM_001131072.1	XM_001131072.1		729698	113416486	XM_001131072.1	LOC729698	XP_001131072.1	ILMN_3244617	0002970113	S	121	GATCAGGAAGGTGAGCTCAGGAGTGAGGATGTCATGGACCTCACAGAAGG	5	-	17603827-17603876	5p15.1a	PREDICTED: Homo sapiens similar to hCG1809904 (LOC729698), mRNA.					
Homo sapiens	RefSeq	NM_178536.2	ILMN_137470	LCN12	NM_178536.2	NM_178536.2		286256	31341771	NM_178536.2	LCN12	NP_848631.1	ILMN_1769116	0003370240	S	1676	AGGCTGGTCACCCCAGGCCAGCGTCTGTTGAAGGATGAAGCAGCTCCTGT	9	+	138969642-138969691	9q34.3e	Homo sapiens lipocalcin 12 (LCN12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC48935; MGC34753	MGC48935; MGC34753
Homo sapiens	RefSeq	NM_000300.2	ILMN_13069	PLA2G2A	NM_000300.2	NM_000300.2		5320	20149501	NM_000300.2	PLA2G2A	NP_000291.1	ILMN_1740586	0004860152	S	795	ATGCAGAAAGCATCCCTCACCCATCCTAGAGGCCAGGCAGGAGCCCTTCT	1	-	20174643-20174692	1p36.13a	Homo sapiens phospholipase A2, group IIA (platelets, synovial fluid) (PLA2G2A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9272153] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate; requires Ca2+ [goid 47498] [pmid 9272153] [evidence TAS]	sPLA2; PLAS1; PLA2S; PLA2; PLA2L; MOM1; PLA2B	sPLA2; PLAS1; PLA2S; PLA2; PLA2L; MOM1; PLA2B
Homo sapiens	RefSeq	NR_024054.1	ILMN_364307	LOC100170939	NR_024054.1	NR_024054.1		100170939	195539350	NR_024054.1	LOC100170939		ILMN_3238814	0005860669	S	794	AGGCAGTTTCCGGAAACAGTGACCCTGAGAAGGCTTCCTCCTGAGTATGC	5	-	70423780-70423829		Homo sapiens glucuronidase, beta pseudogene (LOC100170939), non-coding RNA.					
Homo sapiens	RefSeq	NM_152671.2	ILMN_27812	PIKFYVE	NM_152671.3	NM_152671.3		200576	121583881	NM_152671.3	PIKFYVE	NP_689884.1	ILMN_1742197	0004210563	I	1551	GGCCATAGGATCTCATGCCAGCCTGTCCTTCTGGCTTCCTCTGTCCCACG	2	+	208878030-208878079	2q33.3d	Homo sapiens phosphoinositide kinase, FYVE finger containing (PIKFYVE), transcript variant 3, mRNA.				PIKFYVE; KIAA0981; PIP5K; CFD; MGC40423	PIKfyve; KIAA0981; PIP5K; CFD; MGC40423
Homo sapiens	RefSeq	NM_012413.3	ILMN_6510	QPCT	NM_012413.3	NM_012413.3		25797	68216098	NM_012413.3	QPCT	NP_036545.1	ILMN_2113049	0007040338	S	1515	TCAACGATAGTTTCTCAACAGTACTTAAATAGCGGTTGGAAAACGTAGCC	2	+	37453781-37453830	2p22.2a	Homo sapiens glutaminyl-peptide cyclotransferase (QPCT), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 7999256] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: L-glutaminyl-peptide = 5-oxoprolyl-peptide + NH3 [goid 16603] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	QC; GCT	QC; GCT
Homo sapiens	RefSeq	NM_012413.3	ILMN_6510	QPCT	NM_012413.3	NM_012413.3		25797	68216098	NM_012413.3	QPCT	NP_036545.1	ILMN_1741727	0005570139	S	1069	CAGTTCTGCATCTGATACCGTCTCCTTTCCCTGAAGTCTGGCACACCATG	2	+	37453335-37453384	2p22.2a	Homo sapiens glutaminyl-peptide cyclotransferase (QPCT), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 7999256] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: L-glutaminyl-peptide = 5-oxoprolyl-peptide + NH3 [goid 16603] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	QC; GCT	QC; GCT
Homo sapiens	RefSeq	XM_001717875.1	ILMN_337184	LOC732445	XM_001717875.1	XM_001717875.1		732445	169217880	XM_001717875.1	LOC732445	XP_001717927.1	ILMN_3237574	0000830717	S	1771	GCCCCAAAAGCTGGCTCAAAGTCCTTGGGTGGATTCACTGGAGATGGGCA					PREDICTED: Homo sapiens similar to alpha 7 neuronal nicotinic acetylcholine receptor (LOC732445), mRNA.					
Homo sapiens	RefSeq	XM_941815.1	ILMN_35268	LOC647190	XM_941815.2	XM_941815.2		647190	113418080	XM_941815.2	LOC647190	XP_946908.1	ILMN_1670177	0000830343	S	127	TTGCTCAACTGTCAGTCACCAAGTATTACTCATTCATACTCTCTGTCCTT				6p12.1d	PREDICTED: Homo sapiens similar to 40S ribosomal protein S16 (LOC647190), mRNA.					
Homo sapiens	RefSeq	NM_152587.3	ILMN_8077	C11ORF65	NM_152587.3	NM_152587.3		160140	115298675	NM_152587.3	C11orf65	NP_689800.3	ILMN_2045800	0000620246	S	616	GTGGATGAGGCAAATGTACTACTCAGGAAGTCTGGAGGCTAAGTCAACAC	11	-	108264070-108264105:108276156-108276169	11q22.3c	Homo sapiens chromosome 11 open reading frame 65 (C11orf65), mRNA.				MGC33948	
Homo sapiens	Unigene	Hs.427229	ILMN_90738	HS.427229	Hs.427229		Hs.427229		5440034	AI820955			ILMN_1881003	0003420279	S	160	GTGTTGACTACGCAAACCTCAGGGCACCTTGGCAAGACTTGGGATGGACA	18	-	63531526-63531575		nc09c12.y5 NCI_CGAP_Pr1 Homo sapiens cDNA clone IMAGE:1007638 similar to contains element L1 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	XR_001276.1	ILMN_41839	LOC652200	XM_941573.2	XM_941573.2		652200	113418930	XM_941573.2	LOC652200	XP_946666.1	ILMN_1664724	0001850689	A	312	GGTTGTTCGGAATCCTATAATTGAAAAACAGAGTAAAGATGGAAAACCAG					PREDICTED: Homo sapiens similar to CG14980-PB (LOC652200), mRNA.					
Homo sapiens	RefSeq	NM_017424.2	ILMN_10713	CECR1	NM_017424.2	NM_017424.2		51816	29029549	NM_017424.2	CECR1	NP_059120.2	ILMN_1686283	0004010427	I	691	CCAAGTGGATTCTGCTGGAGGATTATCGGAAGCGGGTGCAGAACGTCACT	22	-	17687974-17688023	22q11.1d	Homo sapiens cat eye syndrome chromosome region, candidate 1 (CECR1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10756095] [evidence NAS]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 10756095] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]	ADGF; IDGFL	ADGF; IDGFL
Homo sapiens	RefSeq	XM_927686.1	ILMN_36235	LOC644571	XM_927686.1	XM_927686.1		644571	89025556	XM_927686.1	LOC644571	XP_932779.1	ILMN_1673104	0005910703	S	10	TTCTCTCCTATTTGAAACACAGGACTCTGTCTCCTCCTAGATACACACCA	7	+	153090843-153090892		PREDICTED: Homo sapiens hypothetical protein LOC644571 (LOC644571), mRNA.					
Homo sapiens	RefSeq	NM_004851.1	ILMN_12115	NAPSA	NM_004851.1	NM_004851.1		9476	4758753	NM_004851.1	NAPSA	NP_004842.1	ILMN_1784040	0002100296	S	1080	GTCATCCAGACTACTCGAAATGGCGTCCGCCTCTGCTTGTCCGGTTTCCA	19	-	55553808-55553849:55554080-55554087	19q13.33c	Homo sapiens napsin A aspartic peptidase (NAPSA), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9877162] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 9877162] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Kdap; NAP1; SNAPA; NAPA; KAP	Kdap; NAP1; KAP; SNAPA; NAPA
Homo sapiens	RefSeq	XM_946081.1	ILMN_138447	C7ORF20	XM_946081.1	XM_946081.1		51608	89025656	XM_946081.1	C7orf20	XP_951174.1	ILMN_1681057	0005090193	I	79	AGTGCATGGGAGGGCTGCGCTCGGCGCATCTGCAGAGATCCCCTGAAGAG				7p22.3c	PREDICTED: Homo sapiens chromosome 7 open reading frame 20, transcript variant 8 (C7orf20), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_001542.2	ILMN_15014	IGSF3	NM_001542.2	NM_001542.2		3321	55953132	NM_001542.2	IGSF3	NP_001533.2	ILMN_1704353	0002900674	A	6841	CAGATGGATGGTAATGGTGCCCTCCAGTGGCTGTGAGACCTCATTGCGCA	1	-	117117393-117117442	1p13.1b	Homo sapiens immunoglobulin superfamily, member 3 (IGSF3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			V8; EWI-3; MGC117164	V8; EWI-3; MGC117164
Homo sapiens	RefSeq	NM_175923.3	ILMN_138411	MGC42630	NM_175923.3	NM_175923.3		286301	61676204	NM_175923.3	MGC42630	NP_787119.1	ILMN_1716555	0002190133	S	1498	GAAACAATCTGATTGGGGCATTGCTGGATCAGAAAATGTGTGACCTTTTT	9	-	67374725-67374774		Homo sapiens hypothetical protein MGC42630 (MGC42630), mRNA.					
Homo sapiens	RefSeq	XM_001718675.1	ILMN_351257	LOC100130705	XM_001718675.1	XM_001718675.1		100130705	169171213	XM_001718675.1	LOC100130705	XP_001718727.1	ILMN_3271831	0002750730	M	61	AGGGAAAAGATGTTGCGCTGTGAATGGTACCGCAAGTATGGGTCGATGGT	7	+	128293760-128293809	7q32.1a	PREDICTED: Homo sapiens hypothetical LOC100130705 (LOC100130705), mRNA.					
Homo sapiens	RefSeq	XM_936831.1	ILMN_39560	IQSEC3	XM_936831.2	XM_936831.2		440073	113423601	XM_936831.2	IQSEC3	XP_941924.2	ILMN_1758928	0006180138	S	6564	TCTCTCCCCTGGCCACAGCAGCACCATTCCTTTACCCCAGGATAATGCAC				12p13.33d	PREDICTED: Homo sapiens IQ motif and Sec7 domain 3 (IQSEC3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]		
Homo sapiens	Unigene	Hs.557039	ILMN_112700	HS.557039	Hs.557039		Hs.557039		6834459	AW337833			ILMN_1876466	0002350070	S	432	CTGGCCCATTTAGGTTTGGACTCTAGGAGAGAGCAAGGAGGAGGCAGGAG	11	+	102088169-102088216		he11a05.x1 NCI_CGAP_CML1 Homo sapiens cDNA clone IMAGE:2918672 3, mRNA sequence					
Homo sapiens	RefSeq	NM_012324.3	ILMN_166298	MAPK8IP2	NM_012324.3	NM_012324.3		23542	117446086	NM_012324.3	MAPK8IP2	NP_036456.1	ILMN_2262930	0003130026	I	107	TCCCGGAGAAGATGGCGGATCGCGCGGAGATGTTTTCTCTCTCCACCTTC	22	+	49386103-49386113:49386114-49386152	22q13.33b	Homo sapiens mitogen-activated protein kinase 8 interacting protein 2 (MAPK8IP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10490659] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [pmid 10490659] [evidence TAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [pmid 10756100] [evidence NAS]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [pmid 10490659] [evidence IDA]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 12023290] [evidence NAS]; Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [pmid 10490659] [evidence NAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 10490659] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence ISS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 10490659] [evidence IPI]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [pmid 12244047] [evidence IDA]	JIP2; PRKM8IPL; IB2	JIP2; PRKM8IPL; IB2
Homo sapiens	RefSeq	NM_012324.3	ILMN_166298	MAPK8IP2	NM_012324.3	NM_012324.3		23542	117446086	NM_012324.3	MAPK8IP2	NP_036456.1	ILMN_2351262	0001770019	A	2671	TTTGGCAAGGACTGGATTGGGGGGACATGGGACCTTACGCTTGTGGGGGT	22	+	49396153-49396202	22q13.33b	Homo sapiens mitogen-activated protein kinase 8 interacting protein 2 (MAPK8IP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10490659] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [pmid 10490659] [evidence TAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [pmid 10756100] [evidence NAS]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [pmid 10490659] [evidence IDA]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 12023290] [evidence NAS]; Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [pmid 10490659] [evidence NAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 10490659] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence ISS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 10490659] [evidence IPI]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [pmid 12244047] [evidence IDA]	JIP2; PRKM8IPL; IB2	JIP2; PRKM8IPL; IB2
Homo sapiens	RefSeq	NM_005956.2	ILMN_10026	MTHFD1	NM_005956.2	NM_005956.2		4522	13699867	NM_005956.2	MTHFD1	NP_005947.2	ILMN_1785324	0001660270	S	2759	CTTAGTAGGAACGATGAGCACAATGCCTGGACTCCCCACCCGGCCCTGTT	14	+	63991334-63991346:63994685-63994721	14q23.2b	Homo sapiens methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase (MTHFD1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 3528153] [evidence TAS]	The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 105] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + formate + tetrahydrofolate = ADP + phosphate + 10-formyltetrahydrofolate [goid 4329] [pmid 3053686] [evidence TAS]; Catalysis of the reaction: 5,10-methenyltetrahydrofolate + H2O = 10-formyltetrahydrofolate [goid 4477] [pmid 3053686] [evidence TAS]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + NADP+ = 5,10-methenyltetrahydrofolate + NADPH + H+ [goid 4488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+ [goid 16155] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MTHFC; MTHFD	MTHFC; MTHFD
Homo sapiens	RefSeq	NM_014446.1	ILMN_15683	ITGB1BP3	NM_170678.2	NM_170678.2		27231	151101232	NM_170678.2	ITGB1BP3	NP_733778.1	ILMN_1776850	0002810192	A	764	GGAGATGGAGGCCAACGGTGTGGAAGTGGTCTACCTGGACGGCATGAAGT	19	+	3892147-3892175:3893081-3893101	19p13.3e	Homo sapiens integrin beta 1 binding protein 3 (ITGB1BP3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12809483] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + N-ribosylnicotinamide = ADP + nicotinamide ribonucleotide [goid 50262] [evidence IEA]	MGC126624; NRK2; MIBP	MGC126624; NRK2; MIBP
Homo sapiens	RefSeq	NM_170678.1	ILMN_15683	ITGB1BP3	NM_170678.2	NM_170678.2		27231	151101232	NM_170678.2	ITGB1BP3	NP_733778.1	ILMN_1656812	0006250541	I	681	AGAAGTACCCGCAACTACACAGTCCCTGATCCCCCCGGCCTCTTCGATGG	19	+	3890965-3890969:3892069-3892113	19p13.3e	Homo sapiens integrin beta 1 binding protein 3 (ITGB1BP3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base [goid 19363] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12809483] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + N-ribosylnicotinamide = ADP + nicotinamide ribonucleotide [goid 50262] [evidence IEA]	MGC126624; NRK2; MIBP	MGC126624; NRK2; MIBP
Homo sapiens	RefSeq	XM_372913.3	ILMN_166353	LOC391347	XM_372913.3	XM_372913.3		391347	88954672	XM_372913.3	LOC391347	XP_372913.3	ILMN_1654185	0001070161	S	406	ATCCCTGGACATACGCCCTCGACAGACATGCACAATGCACCCCCCGGACA					PREDICTED: Homo sapiens hypothetical LOC391347 (LOC391347), mRNA.					
Homo sapiens	RefSeq	NM_207310.1	ILMN_27770	CCDC74B	NM_207310.1	NM_207310.1		91409	46409265	NM_207310.1	CCDC74B	NP_997193.1	ILMN_1747655	0001050632	S	144	TCTGTGGGCGTCCAGTCCTTGAGGCCGCAGAGCCCGCAGCTCAGGCAGAG	2	-	130902438-130902487	2q21.1b	Homo sapiens coiled-coil domain containing 74B (CCDC74B), mRNA.				DKFZp434E2321	DKFZp434E2321
Homo sapiens	RefSeq	NM_207310.1	ILMN_27770	CCDC74B	NM_207310.1	NM_207310.1		91409	46409265	NM_207310.1	CCDC74B	NP_997193.1	ILMN_3251383	0002370424	S	1174	AGAAACGGCGCCTGCATCGCTCGGTGCTTTGAGCTACCCGCATCTGGTCA	2	-	130897109-130897127:130897128-130897158	2q21.1b	Homo sapiens coiled-coil domain containing 74B (CCDC74B), mRNA.				DKFZp434E2321	DKFZp434E2321
Homo sapiens	RefSeq	NM_021574.1	ILMN_136985	BCR	NM_021574.1	NM_021574.1		613	11038640	NM_021574.1	BCR	NP_067585.1	ILMN_1669663	0002030110	I	98	CTCCATCGCGCATCGCGGCCGCCTCCCCCCGGCCCTCCCTTCCTGCGGCG	22	+	21852649-21852698	22q11.23a	Homo sapiens breakpoint cluster region (BCR), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 1657398] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence NAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 1657398] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 1903516] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	D22S11; ALL; PHL; D22S662; BCR1; CML	PHL; D22S662; BCR1; CML; D22S11; ALL
Homo sapiens	Unigene	Hs.544242	ILMN_107692	HS.544242	Hs.544242		Hs.544242		2331110	AF009307			ILMN_1884969	0000510437	S	66	CGTGCGTGGGCTGGTGTAGGCATAAAGGAATGGTGGGAAATACGGCCAGC	5	-	9914346-9914395		Homo sapiens clone TEE11 Cri-du-chat region mRNA					
Homo sapiens	RefSeq	NR_024064.1	ILMN_363742	DAD1L	NR_024064.1	NR_024064.1		56286	195947363	NR_024064.1	DAD1L		ILMN_3235467	0002350154	S	491	CCAACTGATTTGGTGTGGAGGAGAGCCCAGAGAAGTTCCCTCTCTCTGTC	12	-	25070726-25070775		Homo sapiens defender against cell death 1-like (DAD1L), non-coding RNA.					
Homo sapiens	RefSeq	XR_000579.1	ILMN_1675	C8ORF54	NM_001038706.1	NM_001038706.1		439941	84662755	NM_001038706.1	C8orf54	NP_001033795.1	ILMN_1788415	0006350020	A	2212	CACCTGTGAAATAACCACCATCATTGGGCTTTCAGGGAGGAGAAGGGGCA	8	-	125065612-125065661	8q24.13c	Homo sapiens chromosome 8 open reading frame 54 (C8orf54), mRNA.				FLJ35721	
Homo sapiens	RefSeq	NM_020406.2	ILMN_22315	CD177	NM_020406.2	NM_020406.2		57126	110735432	NM_020406.2	CD177	NP_065139.2	ILMN_3251610	0002100670	S	2256	GCATCTGCGTATCGTGGGATAATTGACATGAGGGCTTGAGAGAACTCCAG	19	+	43867372-43867421	19q13.31a	Homo sapiens CD177 molecule (CD177), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			NB1; PRV1; HNA2A	NB1; PRV1; HNA2A
Homo sapiens	RefSeq	NM_020406.1	ILMN_22315	CD177	NM_020406.2	NM_020406.2		57126	110735432	NM_020406.2	CD177	NP_065139.2	ILMN_1774071	0001300465	S	1245	TGCCTCTCAGCATGAGGGAGGTGGGGCTGAGGGCCTGGAGTCTCTCACTT	19	+	43866361-43866410	19q13.31a	Homo sapiens CD177 molecule (CD177), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			NB1; PRV1; HNA2A	NB1; PRV1; HNA2A
Homo sapiens	RefSeq	NM_144644.2	ILMN_22568	SPATA4	NM_144644.2	NM_144644.2		132851	31543824	NM_144644.2	SPATA4	NP_653245.2	ILMN_2195892	0001500431	S	620	AGCTACCAGATGCGTTTACCCCTGGTTTCCAGGTCTACAGTTTCGAAGTC	4	-	177350899-177350948	4q34.2a	Homo sapiens spermatogenesis associated 4 (SPATA4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 12019456] [evidence IEP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12019456] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC33432; SPEF1B; TSARG2	MGC33432; SPEF1B; TSARG2
Homo sapiens	Unigene	Hs.92308	ILMN_74188	HS.92308	Hs.92308		Hs.92308		31873573	BX537514			ILMN_1817255	0001340669	S	3800	TCTGCCATTGCCTCTGTCTTCCTTGGGGCACCTCAGCTCTGGATGCTACC	12	-	47368592-47368641		Homo sapiens mRNA; cDNA DKFZp313N0919 (from clone DKFZp313N0919)					
Homo sapiens	Unigene	Hs.125537	ILMN_76141	HS.125537	Hs.125537		Hs.125537		27843213	BX097369			ILMN_1823752	0007610725	S	650	GAAGGGACACCCAGGTCAGCCCCCATCATTGTATCTGAAACCAACACTTC	11	-	26263846-26263880:26263882-26263896		BX097369 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998C223714, mRNA sequence					
Homo sapiens	RefSeq	NM_021078.1	ILMN_24446	KAT2A	NM_021078.2	NM_021078.2		2648	153791534	NM_021078.2	KAT2A	NP_066564.2	ILMN_1782247	0004830301	S	2966	GGTTGGAAGTTCAGCCCAAACTGAAGGGGGCCATGCCTTGTCCAGCACTG	17	-	40265225-40265274	17q21.2b	Homo sapiens K(lysine) acetyltransferase 2A (KAT2A), mRNA.				hGCN5; GCN5; KAT2A; MGC102791; PCAF-b	hGCN5; GCN5; MGC102791; PCAF-b
Homo sapiens	RefSeq	XM_934211.1	ILMN_164246	LOC728608	XM_001127908.1	XM_001127908.1		728608	113421459	XM_001127908.1	LOC728608	XP_001127908.1	ILMN_1690583	0000830541	I	29	TAATCTACAATGTCATTTCCCATCCAAGCTTGACTTCTACCTTTACTTTC	10	-	46155140-46155189	10q11.22a	PREDICTED: Homo sapiens similar to centaurin, gamma-like family, member 1 (LOC728608), mRNA.					
Homo sapiens	RefSeq	XM_001717889.1	ILMN_349045	LOC100128267	XM_001717889.1	XM_001717889.1		100128267	169164747	XM_001717889.1	LOC100128267	XP_001717941.1	ILMN_3233698	0007400386	I	687	ATATCTGGCTGCAGGTGGACATCAGGCCCCAGGTGGAGGAGACCCAGTAC				2q21.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128267 (LOC100128267), partial mRNA.					
Homo sapiens	RefSeq	XM_942012.1	ILMN_34841	LOC650107	XM_942012.1	XM_942012.1		650107	89026514	XM_942012.1	LOC650107	XP_947105.1	ILMN_1736872	0005080184	S	719	CCTGCCTTAGCTTTGCCTTGAGAGCTGCAGGCCCCACCCAGATTTCACTC					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region CTL-L17 precursor (LOC650107), mRNA.					
Homo sapiens	RefSeq	XM_001720028.1	ILMN_340014	LOC100131172	XM_001720028.1	XM_001720028.1		100131172	169172032	XM_001720028.1	LOC100131172	XP_001720080.1	ILMN_3205258	0007560689	A	222	GGGCCGTGGAAACAATCTCAGCCCTGGAACCAGCGCCTGGGAAGTCCCGC				7q36.3c	PREDICTED: Homo sapiens hypothetical LOC100131172 (LOC100131172), mRNA.					
Homo sapiens	RefSeq	XM_942793.1	ILMN_139181	SSX4	XM_942793.1	XM_942793.1		6759	89065691	XM_942793.1	SSX4	XP_947886.1	ILMN_1791645	0006040605	I	1	CAATGAGTGGACTCACAACCTCTGCTGCAGAATGCCCTCATGCGACAGAA				Xp11.23d	PREDICTED: Homo sapiens synovial sarcoma, X breakpoint 4, transcript variant 4 (SSX4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	NM_006542.2	ILMN_10593	SPHAR	NM_006542.2	NM_006542.2		10638	46094053	NM_006542.2	SPHAR	NP_006533.1	ILMN_1718832	0004010368	S	774	TGCAAGCTGCTCATTTTTGAACAGCTTTTTGCATGGGATAGGAGCATGTC	1	+	227507677-227507696:227507697-227507726	1q42.13d	Homo sapiens S-phase response (cyclin-related) (SPHAR), mRNA.		The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 7799938] [evidence TAS]		RP4-803J11.4; MGC88280	RP4-803J11.4; MGC88280
Homo sapiens	RefSeq	NR_029662.1	ILMN_387809	MIR1-2	NR_029662.1	NR_029662.1		406905	262205216	NR_029662.1	MIR1-2		ILMN_3309001	0000010647	S	5	CTCAGAGTACATACTTCTTTATGTACCCATATGAACATACAATGCTATGG				18q11.2a	Homo sapiens microRNA 1-2 (MIR1-2), microRNA.					
Homo sapiens	RefSeq	NM_005919.1	ILMN_27410	MEF2B	NM_005919.1	NM_005919.1		4207	5174542	NM_005919.1	MEF2B	NP_005910.1	ILMN_2068202	0001740711	S	1099	AGGGGGACTAAACACCTCCAGAAGCCTCTACAGTGGCCTGCAGAACCCCT	19	-	19118426-19118457:19118551-19118568	19p13.11b	Homo sapiens myocyte enhancer factor 2B (MEF2B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1516833] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 1516833] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8575763] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ46391; RSRFR2; FLJ32599	FLJ46391; RSRFR2; FLJ32599
Homo sapiens	RefSeq	XM_942715.1	ILMN_137284	MMP17	XM_942715.1	XM_942715.1		4326	89036491	XM_942715.1	MMP17	XP_947808.1	ILMN_1651470	0000240181	I	52	TTCAGGGAACCTCGGCCTGGGGCACGTGGCCTGTTCTCCGTGACTCACTC				12q24.33c	PREDICTED: Homo sapiens matrix metallopeptidase 17 (membrane-inserted), transcript variant 1 (MMP17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8640782] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 8640782] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [pmid 8640782] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8640782] [evidence TAS]		
Homo sapiens	Unigene	Hs.576804	ILMN_128985	HS.576804	Hs.576804		Hs.576804		21732373	AL831877			ILMN_1820879	0007560474	S	175	AGAGCCAGGGCCGTTTCCGACTTCTTTCCCTGTCAAGCCTCCTTAGATAG	10	-	5548328-5548377		Homo sapiens mRNA; cDNA DKFZp547H1510 (from clone DKFZp547H1510)					
Homo sapiens	RefSeq	NM_000507.2	ILMN_16804	FBP1	NM_000507.2	NM_000507.2		2203	16579887	NM_000507.2	FBP1	NP_000498.2	ILMN_1728799	0006020224	S	1176	CCGACGACGTGCTCGAGTTCCTGAAGGTGTATGAGAAGCACTCTGCCCAG	9	-	96405486-96405535	9q22.32a	Homo sapiens fructose-1,6-bisphosphatase 1 (FBP1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9382095] [evidence EXP]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 6000] [pmid 7558035] [evidence TAS]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3 [goid 42578] [evidence IEA]; Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 4331] [pmid 8387495] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 42132] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 42132] [pmid 9382095] [evidence EXP]; Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3 [goid 42578] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16169070] [evidence IPI]	FBP	FBP
Homo sapiens	Unigene	Hs.564884	ILMN_117465	HS.564884	Hs.564884		Hs.564884		19706920	BM987531			ILMN_1910307	0005560463	S	228	GAGAAGTCCCCAAAGACCCCTTCCTTTTCTCTGTGCTGCGGATGATGGAC	16	+	68329046-68329095		UI-H-CO0-ask-g-10-0-UI.s1 NCI_CGAP_Sub9 Homo sapiens cDNA clone IMAGE:5859258 3, mRNA sequence					
Homo sapiens	Unigene	Hs.166545	ILMN_80077	HS.166545	Hs.166545		Hs.166545		47358093	CN358159			ILMN_1861982	0000730220	S	381	TCAGGGATCAAAGGCACCTTGGAGCCCCATGCTTTAGGAATTGTAATGGC	6	-	72142935-72142984		17000600003772 GRN_PREHEP Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	XM_931838.1	ILMN_35469	LOC653145	XM_931838.1	XM_931838.1		653145	89031032	XM_931838.1	LOC653145	XP_936931.1	ILMN_1656074	0001450204	I	61	CTGGCCCAAGAAACCCAGCCAGCACGTGGCAAGGCCCACGCAGAATCCAG	10	-	46587281-46587330	10q11.22b	PREDICTED: Homo sapiens similar to Annexin A8 (Annexin VIII) (Vascular anticoagulant-beta) (VAC-beta), transcript variant 13 (LOC653145), mRNA.					
Homo sapiens	RefSeq	NM_207375.1	ILMN_29745	CLEC2A	NM_207375.1	NM_207375.1		387836	46409379	NM_207375.1	CLEC2A	NP_997258.1	ILMN_1779144	0005900411	S	514	GCTCTGACTGCCGTTTCCCCAAAACAATGTCCCCTGTCAGCAGGAAGCAG	12	-	9942707-9942756	12p13.31a	Homo sapiens C-type lectin domain family 2, member A (CLEC2A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	UNQ5792	UNQ5792
Homo sapiens	Unigene	Hs.46555	ILMN_72751	HS.46555	Hs.46555		Hs.46555		19123745	BM806922			ILMN_1832720	0003710739	S	702	TTTGGTTCCTGTTTGCCCTTGTACTGTGCTGGAGCTCACTGTCCTGGAGC	10	-	73523776-73523825		AGENCOURT_6552744 NIH_MGC_85 Homo sapiens cDNA clone IMAGE:5551930 5, mRNA sequence					
Homo sapiens	RefSeq	XM_944513.1	ILMN_30643	LOC648763	XM_944513.1	XM_944513.1		648763	88979441	XM_944513.1	LOC648763	XP_949606.1	ILMN_1664601	0003710768	I	284	TCGGCTGATCCCCCCTTCGGAGTCATTAATTCAAACGTGTACTCCGCGAA					PREDICTED: Homo sapiens similar to ribonucleic acid binding protein S1 (predicted), transcript variant 2 (LOC648763), mRNA.					
Homo sapiens	RefSeq	NM_000442.2	ILMN_7862	PECAM1	NM_000442.3	NM_000442.3		5175	110347450	NM_000442.3	PECAM1	NP_000433.3	ILMN_1689518	0000430747	S	2532	CCCTGCTCCCACAGAACACAGCAATTCCTCAGGCTAAGCTGCCGGTTCTT	17	-	59794434-59794483	17q23.3b	Homo sapiens platelet/endothelial cell adhesion molecule (PECAM1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9290466] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10858437] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10350061] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9774457] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1690453] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8080982] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9054388] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the platelet alpha granule [goid 31092] [pmid 8080982] [evidence EXP]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7994021] [evidence TAS]; The process by which a cell in a multicellular organism interprets its surroundings [goid 8037] [pmid 1690453] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10801826] [evidence IPI]	CD31; PECAM-1	PECAM-1; CD31
Homo sapiens	RefSeq	XM_932715.1	ILMN_43177	LOC647839	XM_943049.2	XM_943049.2		647839	113430628	XM_943049.2	LOC647839	XP_948142.1	ILMN_1661344	0004560546	S	185	ATGGCGGAGATTAACAAGGAGCCAGAAGGGAATATAGGCCACCATTGCTA					PREDICTED: Homo sapiens hypothetical LOC647839 (LOC647839), mRNA.					
Homo sapiens	RefSeq	NM_000845.1	ILMN_183041	GRM8	NM_000845.1	NM_000845.1		2918	4504148	NM_000845.1	GRM8	NP_000836.1	ILMN_1729212	0006040431	S	3171	ATGAGTCTGTTTCTTGTAATGGCTGACCAGATTGAAGCCCTGGGTTGTGC	7	-	125865969-125866018	7q31.33c	Homo sapiens glutamate receptor, metabotropic 8 (GRM8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9473604] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 9473604] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9473604] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [pmid 11166323] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A G-protein coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity [goid 1642] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ41058; GLUR8; mGlu8; MGLUR8; MGC126724; GPRC1H	FLJ41058; GLUR8; mGlu8; MGLUR8; MGC126724; GPRC1H
Homo sapiens	RefSeq	NM_020641.1	ILMN_15790	C9ORF11	NM_020641.1	NM_020641.1		54586	65287602	NM_020641.1	C9orf11	NP_065692.1	ILMN_1751069	0005720139	S	555	CCCAATTCCAGAGTCTGATGTGAATGCTACACAGGGAGAAAATCAGCCAG	9	-	27276321-27276360:27279670-27279679	9p21.2a	Homo sapiens chromosome 9 open reading frame 11 (C9orf11), mRNA.				Afaf	Afaf
Homo sapiens	RefSeq	NM_000284.1	ILMN_9293	PDHA1	NM_000284.1	NM_000284.1		5160	4505684	NM_000284.1	PDHA1	NP_000275.1	ILMN_1772369	0006450372	S	1300	TACCTTCAGGGGGCTACCAGACAGTGTTCTCAACTTGGTTAAGGAGGAAG	X	+	19287714-19287763	Xp22.12b	Homo sapiens pyruvate dehydrogenase (lipoamide) alpha 1 (PDHA1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 3034892] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the oxidative decarboxylation of pyruvate [goid 4738] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]; Catalysis of the oxidative decarboxylation of pyruvate [goid 4738] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]; Catalysis of the oxidative decarboxylation of pyruvate [goid 4738] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]; Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2 [goid 4739] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the oxidative decarboxylation of pyruvate [goid 4738] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces a disulfide [goid 16624] [evidence IEA]	PDHCE1A; PDHA; PHE1A	PDHCE1A; PDHA; PHE1A
Homo sapiens	RefSeq	NM_177534.1	ILMN_29763	SULT1A1	NM_177536.1	NM_177536.1		6817	29540542	NM_177536.1	SULT1A1	NP_803880.1	ILMN_1778756	0007510711	A	1034	GCGAATCAAACCTGACCAAGCGGCTCAAGAATAAAATATGAATTGAGGGC	16	-	28524561-28524610	16p11.2e	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 (SULT1A1), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [pmid 8661000] [evidence TAS]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HAST1/HAST2; MGC5163; P-PST; MGC131921; ST1A3; TSPST1; STP1; STP; PST	MGC5163; MGC131921; TSPST1; STP; PST; HAST1/HAST2; P-PST; ST1A3; STP1
Homo sapiens	RefSeq	XM_936750.1	ILMN_29763	SULT1A1	NM_177536.1	NM_177536.1		6817	29540542	NM_177536.1	SULT1A1	NP_803880.1	ILMN_1656900	0006270725	I	856	GGACCACAGCATCTCCCCCTTCATGAGGAAAGGCATGGCTGGGGACTGGA	16	-	28524739-28524755:28524878-28524910	16p11.2e	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 (SULT1A1), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [pmid 8661000] [evidence TAS]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HAST1/HAST2; MGC5163; P-PST; MGC131921; ST1A3; TSPST1; STP1; STP; PST	
Homo sapiens	RefSeq	NM_177536.1	ILMN_29763	SULT1A1	NM_177536.1	NM_177536.1		6817	29540542	NM_177536.1	SULT1A1	NP_803880.1	ILMN_1657302	0000990669	I	394	GGTCTCGGCCTTCTACGCCGGTATGAGCATTCTCCAGGGAAAGGATGACA	16	-	28538927-28538955:28541953-28541973	16p11.2e	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 (SULT1A1), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [pmid 8661000] [evidence TAS]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HAST1/HAST2; MGC5163; P-PST; MGC131921; ST1A3; TSPST1; STP1; STP; PST	MGC5163; MGC131921; TSPST1; STP; PST; HAST1/HAST2; P-PST; ST1A3; STP1
Homo sapiens	RefSeq	XM_375378.3	ILMN_167022	LOC732275	XM_001134308.1	XM_001134308.1		732275	113426559	XM_001134308.1	LOC732275	XP_001134308.1	ILMN_1656257	0003800605	A	282	GGGAAGGATGAATGCCAACTATGTTCCAGGAACTTCCACTGTTCTCACAC				16q24.1c	PREDICTED: Homo sapiens hypothetical protein LOC732275 (LOC732275), mRNA.					
Homo sapiens	RefSeq	XM_926567.1	ILMN_41403	LOC643203	XM_926567.1	XM_926567.1		643203	89058242	XM_926567.1	LOC643203	XP_931660.1	ILMN_1760033	0006280020	S	142	GGCGCACAGGGAACATGTGTCCCAAGGCAGCCCCTGAAGCTGCCGGGTTC	21	+	98995-99020:99250-99273		PREDICTED: Homo sapiens hypothetical protein LOC643203 (LOC643203), mRNA.					
Homo sapiens	RefSeq	NM_032991.2	ILMN_29066	CASP3	NM_032991.2	NM_032991.2		836	73622122	NM_032991.2	CASP3	NP_116786.1	ILMN_2388155	0002260215	A	2261	GTGCGGAGCCGTCACTGCACCAAGTCTCACTGGCTGTCAGTATGACATTT	4	-	185786039-185786088	4q35.1e	Homo sapiens caspase 3, apoptosis-related cysteine peptidase (CASP3), transcript variant beta, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9108473] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9624143] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16983089] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8976194] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11313965] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10823823] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10490026] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17823127] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10748026] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11106668] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11500511] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11689006] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16286477] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11076937] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12888622] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 7983002] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA];  [goid 8625] [evidence IEA]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IEA]; The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA [goid 30264] [pmid 11350920] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence IEA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 9353287] [evidence IGI]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of activated T cell proliferation [goid 46007] [evidence IEA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 10942389] [evidence TAS]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9736630] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 9353287] [evidence IDA]	CPP32B; SCA-1; CPP32	CPP32B; SCA-1; CPP32
Homo sapiens	RefSeq	NM_001013671.1	ILMN_15242	LOC400499	NM_001013671.1	NM_001013671.1		400499	61966796	NM_001013671.1	LOC400499	NP_001013693.1	ILMN_2215355	0001570541	S	3074	TGCATCCATACGATGGCAAAGTCATCCCCAGGAACACAGAGGGGTGCCTG	16	-	11447927-11447976	16p13.13c-p13.13b	Homo sapiens hypothetical gene supported by AK126539 (LOC400499), mRNA.					
Homo sapiens	RefSeq	NM_001013671.1	ILMN_15242	LOC400499	NM_001013671.1	NM_001013671.1		400499	61966796	NM_001013671.1	LOC400499	NP_001013693.1	ILMN_1728338	0004060717	S	2966	AGCGCTATTCCCTGGAGACTAGGGTTGTCCTGAATGGCCGAGAGGAAACC	16	-	11448146-11448195	16p13.13c-p13.13b	Homo sapiens hypothetical gene supported by AK126539 (LOC400499), mRNA.					
Homo sapiens	RefSeq	XM_940028.1	ILMN_34294	LOC197350	XM_940028.2	XM_940028.2		197350	113426257	XM_940028.2	LOC197350	XP_945121.1	ILMN_1789871	0003830301	A	1369	TCATCTGAGAGCGAGGCGTGGCAGCGTGGGGGTGGCCGTGCAATAAATAT				16p13.3d	PREDICTED: Homo sapiens hypothetical protein LOC197350 (LOC197350), mRNA.					
Homo sapiens	RefSeq	NM_152740.2	ILMN_28448	HIBADH	NM_152740.2	NM_152740.2		11112	41393565	NM_152740.2	HIBADH	NP_689953.1	ILMN_1804150	0002480136	S	1749	TGGACTCCGTCACAATATGGTAGGATATCCCTCACCAACTCCCGACACTC	7	-	27565919-27565968	7p15.2a	Homo sapiens 3-hydroxyisobutyrate dehydrogenase (HIBADH), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence NAS]	The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid [goid 6573] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+ [goid 4616] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: 3-hydroxy-2-methylpropanoate + NAD+ = 2-methyl-3-oxopropanoate + NADH + H+ [goid 8442] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	MGC40361; NS5ATP1	MGC40361; NS5ATP1
Homo sapiens	RefSeq	NR_028084.1	ILMN_387502	FAM41AY2	NR_028084.1	NR_028084.1		100302526	254540175	NR_028084.1	FAM41AY2		ILMN_3308168	0002470072	S	1847	AATGCTTGTTACTGGGCATGTGATAAGCCCAGACAGCTTCAGCCTTGCAG					Homo sapiens family with sequence similarity 41, member A, Y-linked 2 (FAM41AY2), non-coding RNA.					
Homo sapiens	RefSeq	XM_001725913.1	ILMN_351815	LOC100132856	XM_001725913.1	XM_001725913.1		100132856	169209871	XM_001725913.1	LOC100132856	XP_001725965.1	ILMN_3248645	0002100360	S	399	CACGTGCCTACCTGCATGTGAGCGTGAGAGGAGCTTTGTGTGTGAGAACA	16	+	33595684-33595733	16p11.2a	PREDICTED: Homo sapiens similar to mCG1031965 (LOC100132856), mRNA.					
Homo sapiens	RefSeq	NM_194457.1	ILMN_13593	UBE2J2	NM_194457.1	NM_194457.1		118424	37577129	NM_194457.1	UBE2J2	NP_919439.1	ILMN_1772712	0001410392	A	1707	TCCCTCACATCCCGTGCCCCCTGCGCTGGCCTTCACAGTAGGTAATGGCT	1	-	1189853-1189902	1p36.33a	Homo sapiens ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) (UBE2J2), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	NCUBE2; PRO2121	NCUBE2; PRO2121
Homo sapiens	RefSeq	NM_182535.1	ILMN_5650	LOC200261	NM_182535.1	NM_182535.1		200261	32698899	NM_182535.1	LOC200261	NP_872341.1	ILMN_1673158	0000610017	S	1649	GGTCTATTAGCATGCCACCATGCCCCTCCTCCGATGCATACAGTGCCCAG	20	-	23053902-23053951	20p11.21c	Homo sapiens hypothetical protein LOC200261 (LOC200261), mRNA.					
Homo sapiens	RefSeq	NM_031412.2	ILMN_5224	GABARAPL1	NM_031412.2	NM_031412.2		23710	56676368	NM_031412.2	GABARAPL1	NP_113600.1	ILMN_2151281	0006420465	S	1534	CCCTTCAGGCTCACATGCACAGGAATGCTACATGATGGCCAGCTGCTTCC	12	+	10266658-10266707	12p13.2c	Homo sapiens GABA(A) receptor-associated protein like 1 (GABARAPL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 15292400] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9892355] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [evidence ISS]; Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [evidence ISS]	ATG8L; GEC1; APG8L; ATG8	ATG8L; GEC1; APG8L; ATG8
Homo sapiens	RefSeq	NM_203426.1	ILMN_174657	LOC727849	XM_001125942.1	XM_001125942.1		727849	113425367	XM_001125942.1	LOC727849	XP_001125942.1	ILMN_1722178	0004540377	S	68	CAGACGTTACTGCCCTCTTGCGTGCCCCGGCCACCCCCGGGCGGCTTGTA	15	-	80979934-80979983	15q25.2a	PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC727849), mRNA.					MGC60197
Homo sapiens	RefSeq	XM_933168.1	ILMN_174657	LOC727849	XM_001125942.1	XM_001125942.1		727849	113425367	XM_001125942.1	LOC727849	XP_001125942.1	ILMN_1806103	0004640035	A	140	GCTACGTGCAGAGCTGTCGCGGAGCCGGAGCAGCAGCGGTGAAGCCCCTC	15	-	80979862-80979911	15q25.2a	PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC727849), mRNA.					
Homo sapiens	RefSeq	NM_014829.2	ILMN_165992	DDX46	NM_014829.2	NM_014829.2		9879	41327772	NM_014829.2	DDX46	NP_055644.2	ILMN_1727001	0003890192	S	5398	TGGCAGTCCCACATCGATGATAATTGGTGCTCCCTTCATCCAACTGGATC	5	+	134164408-134164457	5q31.1e	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 (DDX46), mRNA.				MGC9936; KIAA0801; FLJ25329	MGC9936; PRPF5; KIAA0801; FLJ25329
Homo sapiens	RefSeq	NM_020348.1	ILMN_165506	CNNM1	NM_020348.1	NM_020348.1		26507	9966788	NM_020348.1	CNNM1	NP_065081.1	ILMN_1657750	0000520519	S	4546	GCTGGTCTTCATCACCTGAGGCCACCAGGCTCAAGCCACTGCTGTTGCAT	10	+	101143841-101143890	10q24.2b-q24.2c	Homo sapiens cyclin M1 (CNNM1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]		FLJ31632; ACDP1	ACDP1
Homo sapiens	RefSeq	XM_001719528.1	ILMN_337639	LOC100129002	XM_001719528.1	XM_001719528.1		100129002	169167102	XM_001719528.1	LOC100129002	XP_001719580.1	ILMN_3179565	0005550364	A	1345	GCCACGTTTGGTCACACGGGCTCCAGCTCGGACTCGCCTCTGTCTTTGCC				4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100129002 (LOC100129002), mRNA.					
Homo sapiens	RefSeq	XM_001719528.1	ILMN_337639	LOC100129002	XM_001719528.1	XM_001719528.1		100129002	169167102	XM_001719528.1	LOC100129002	XP_001719580.1	ILMN_3256029	0003140025	M	1025	TGTCGGAGCCAACGGGACTGGGTTTTGGCTGGGTGCAGGGGAGGTTGCGT				4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100129002 (LOC100129002), mRNA.					
Homo sapiens	RefSeq	NM_003234.1	ILMN_12909	TFRC	NM_003234.1	NM_003234.1		7037	4507456	NM_003234.1	TFRC	NP_003225.1	ILMN_1674243	0002940435	S	4951	GCTCCTGGTCTTGAGATGTCTTCTCGTTAAGGAGTAGGGCCTTTTGGAGG	3	-	197260755-197260804	3q29f	Homo sapiens transferrin receptor (p90, CD71) (TFRC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1871153] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 14612438] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 6090955] [evidence TAS]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 15229288] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IEA]	The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [pmid 1871153] [evidence NAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with transferrin to initiate a change in cell activity [goid 4998] [pmid 1871153] [evidence NAS]	TFR; TFR1; CD71; TRFR	TFR; TFR1; CD71; TRFR
Homo sapiens	RefSeq	NM_018710.1	ILMN_7212	TMEM55A	NM_018710.1	NM_018710.1		55529	24308164	NM_018710.1	TMEM55A	NP_061180.1	ILMN_1752117	0005960653	S	1946	GGAATCAGCTCTCGCACTGCCCATCTTTGCAGTTTTGAAAAAGAAATTGC	8	-	92075933-92075982	8q21.3e	Homo sapiens transmembrane protein 55A (TMEM55A), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp762O076	DKFZp762O076
Homo sapiens	RefSeq	XM_938315.1	ILMN_46088	LOC649248	XM_938315.1	XM_938315.1		649248	89061178	XM_938315.1	LOC649248	XP_943408.1	ILMN_1734968	0003710129	S	1035	CCCTAATTTTCAGCACCACGAATGCCAAATGCAGGACCATCTGAGGGCCA					PREDICTED: Homo sapiens similar to Zinc finger protein 92 (Zfp-92) (LOC649248), mRNA.					
Homo sapiens	RefSeq	NM_001012734.1	ILMN_24920	AGPAT4	NM_020133.2	NM_020133.2		56895	69128030	NM_020133.2	AGPAT4	NP_064518.1	ILMN_1730504	0003440025	A	7670	ACCATGCTAGTCTTTGAGAGAACGTGTGGATTGGGTGGATGTTTGGACCG	6	-	161551621-161551670	6q26a	Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) (AGPAT4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11487472] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [pmid 15367102] [evidence NAS]	Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [pmid 15367102] [evidence NAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol [goid 46027] [pmid 11487472] [evidence EXP]	dJ473J16.2; LPAAT-delta; 1-AGPAT4; RP3-473J16.2	dJ473J16.2; LPAAT-delta; 1-AGPAT4; RP3-473J16.2
Homo sapiens	RefSeq	NM_032214.2	ILMN_29984	SLA2	NM_032214.2	NM_032214.2		84174	28416422	NM_032214.2	SLA2	NP_115590.1	ILMN_2409720	0000780129	A	2044	GCTGGGATTACAGGTGTGAGCCACGGCACCCAGCCTAGCTCTCAGATCTC	20	-	35241323-35241372	20q11.23a	Homo sapiens Src-like-adaptor 2 (SLA2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11696592] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11891219] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 11696592] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 11696592] [evidence IDA]; Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells [goid 19724] [pmid 11891219] [evidence TAS]; Any series of molecular signals initiated by a ligand entering the target cell, where it binds to an intracellular receptor [goid 30522] [pmid 11891219] [evidence TAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 11891219] [evidence TAS]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [pmid 11696592] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of calcium-mediated signaling [goid 50849] [pmid 11696592] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell [goid 50851] [pmid 11696592] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell activation [goid 50869] [pmid 11891219] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 11891219] [evidence IDA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11891219] [evidence IPI]	FLJ21992; MGC49845; SLAP2; C20orf156; SLAP-2	FLJ21992; MGC49845; SLAP2; C20orf156; SLAP-2
Homo sapiens	RefSeq	NM_001349.2	ILMN_24022	DARS	NM_001349.2	NM_001349.2		1615	45439305	NM_001349.2	DARS	NP_001340.2	ILMN_1813836	0006840711	S	1640	GTTCGTCAGACCTCCATGTTCCCTCGTGATCCCAAACGACTCACTCCTTA	2	-	136664886-136664935	2q21.3b	Homo sapiens aspartyl-tRNA synthetase (DARS), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8449960] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8449960] [evidence TAS]	The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6422] [pmid 8449960] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 8449960] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [pmid 8449960] [evidence TAS]; Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp) [goid 4815] [pmid 8449960] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC111579; DKFZp781B11202	MGC111579; DKFZp781B11202
Homo sapiens	RefSeq	XR_038253.1	ILMN_348818	LOC402175	XR_038253.1	XR_038253.1		402175	169166947	XR_038253.1	LOC402175		ILMN_3291709	0000520468	M	54	GGCCACTGTGCCTGAGACCCTCGACCCAGCCGAATACAACATATCTCTGG				4p13b	PREDICTED: Homo sapiens misc_RNA (LOC402175), miscRNA.					
Homo sapiens	RefSeq	NM_001247.1	ILMN_17684	ENTPD6	NM_001247.1	NM_001247.1		955	4557422	NM_001247.1	ENTPD6	NP_001238.1	ILMN_1677955	0003170209	S	1365	GGACTTCGAGATCGCAGCCAAGTACGTGTGTCGGACCCTGGAGACACAGC	20	+	25152768-25152793:25153841-25153864	20p11.21a	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 6 (putative function) (ENTPD6), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp781K21102; dJ738P15.3; DKFZp781G2277; FLJ36711; CD39L2; NTPDase-6; IL6ST2; IL-6SAG	DKFZp781K21102; dJ738P15.3; DKFZp781G2277; FLJ36711; CD39L2; NTPDase-6; IL6ST2; IL-6SAG
Homo sapiens	RefSeq	NM_001247.1	ILMN_17684	ENTPD6	NM_001247.1	NM_001247.1		955	4557422	NM_001247.1	ENTPD6	NP_001238.1	ILMN_2091792	0007200215	S	2292	CCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACG	20	+	25154923-25154972	20p11.21a	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 6 (putative function) (ENTPD6), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp781K21102; dJ738P15.3; DKFZp781G2277; FLJ36711; CD39L2; NTPDase-6; IL6ST2; IL-6SAG	DKFZp781K21102; dJ738P15.3; DKFZp781G2277; FLJ36711; CD39L2; NTPDase-6; IL6ST2; IL-6SAG
Homo sapiens	RefSeq	NM_032029.2	ILMN_180539	FCAMR	NM_032029.2	NM_032029.2		83953	117320514	NM_032029.2	FCAMR	NP_114418.2	ILMN_2206009	0005490719	S	931	CCCCAGAGAGAAATCCAGGACCCTGAGGGACAGAGAGATGAACTGCTCAG				1q32.1h	Homo sapiens Fc receptor, IgA, IgM, high affinity (FCAMR), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FCA/MR; FKSG87	FCA/MR; FKSG87
Homo sapiens	RefSeq	NM_001251.2	ILMN_5188	CD68	NM_001251.2	NM_001251.2		968	91199547	NM_001251.2	CD68	NP_001242.2	ILMN_2359907	0004570438	A	1610	CAGTGAGCCGTCATCGCGCCACTAAGCCAAGATCGCGCCACTGCACTCCA	17	+	7425907-7425956	17p13.1d	Homo sapiens CD68 molecule (CD68), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7680921] [evidence TAS]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7680921] [evidence TAS]			DKFZp686M18236; SCARD1; GP110	SCARD1
Homo sapiens	RefSeq	NM_001251.2	ILMN_5188	CD68	NM_001251.2	NM_001251.2		968	91199547	NM_001251.2	CD68	NP_001242.2	ILMN_2267914	0006220382	I	267	CACAAAAAATCAGCTACTTTGCTGCCATCCTTCACGGTGACACCCACGGT	17	+	7423878-7423927	17p13.1d	Homo sapiens CD68 molecule (CD68), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7680921] [evidence TAS]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7680921] [evidence TAS]			DKFZp686M18236; SCARD1; GP110	SCARD1
Homo sapiens	RefSeq	XM_001726406.1	ILMN_351175	LOC100134634	XM_001726406.1	XM_001726406.1		100134634	169170391	XM_001726406.1	LOC100134634	XP_001726458.1	ILMN_3248247	0005960240	S	51	GCCTCTGCAGACCCAAGTCGTCCTGAAGTCGGCCTCTCCAGGCCCAGCTC	7	+	56875918-56875967		PREDICTED: Homo sapiens hypothetical protein LOC100134634 (LOC100134634), mRNA.					
Homo sapiens	RefSeq	NM_024102.2	ILMN_15772	WDR77	NM_024102.2	NM_024102.2		79084	20127622	NM_024102.2	WDR77	NP_077007.1	ILMN_1742889	0001110440	S	1668	AAAAAGTTTGGCTTGCCTGTGTAATGCCCACTCCCTTCCCCCTGGCTCCC	1	-	111983202-111983251	1p13.2d	Homo sapiens WD repeat domain 77 (WDR77), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]		MGC2722; Nbla10071; HKMT1069; MEP50; RP11-552M11.3	MGC2722; Nbla10071; HKMT1069; MEP50; RP11-552M11.3
Homo sapiens	RefSeq	NM_033358.2	ILMN_177516	CASP8	NM_001080125.1	NM_001080125.1		841	122056475	NM_001080125.1	CASP8	NP_001073594.1	ILMN_1673757	0002650750	A	825	GGTCATCCTGGGAGAAGGAAAGTTGGACATCCTGAAAAGAGTCTGTGCCC	2	+	201845641-201845690	2q33.1f	Homo sapiens caspase 8, apoptosis-related cysteine peptidase (CASP8), transcript variant G, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10891503] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8681376] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12804595] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10894160] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12887920] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9721089] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10891503] [evidence TAS]; A heterodimer associated with 90S and 66S preribosomes in the nucleolus; involved in ribosomal large subunit biogenesis [goid 30690] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12888622] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 11048727] [evidence EXP]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 8681376] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11717445] [evidence IPI]	MGC78473; MACH; MCH5; ALPS2B; FLICE; CAP4	MGC78473; MACH; MCH5; FLICE; CAP4
Homo sapiens	RefSeq	XM_939766.1	ILMN_46822	LOC650678	XM_939766.1	XM_939766.1		650678	88952591	XM_939766.1	LOC650678	XP_944859.1	ILMN_1768933	0002320026	S	388	GACATAATTGAAGCTCAGCCCTTACTGGCTTCTACCTCAGCACAAAAGGC					PREDICTED: Homo sapiens hypothetical protein LOC650678 (LOC650678), mRNA.					
Homo sapiens	RefSeq	NM_173605.1	ILMN_21044	KCNRG	NM_173605.1	NM_173605.1		283518	27734696	NM_173605.1	KCNRG	NP_775876.1	ILMN_2404589	0000380341	A	843	CCGAAAATTGGCCAACGGAACAAATGTCCTCGGCTTACTGATTGACACTT	13	+	49492375-49492424	13q14.3a	Homo sapiens potassium channel regulator (KCNRG), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16189514] [evidence IPI]	DLTET	DLTET
Homo sapiens	RefSeq	NM_000664.3	ILMN_176065	ACACA	NM_198839.1	NM_198839.1		31	38679976	NM_198839.1	ACACA	NP_942136.1	ILMN_1772123	0002630692	A	10430	TCTGACATTCCCACAGCCCCTCAAACATGCAAGGCTACTAAGGCAGGAGG	17	-	35442110-35442159	17q12b	Homo sapiens acetyl-Coenzyme A carboxylase alpha (ACACA), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [pmid 7905825] [evidence TAS]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]; Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein [goid 4075] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16326698] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ACC1; ACAC; ACCA; ACC	ACC; ACC1; ACAC; ACCA
Homo sapiens	RefSeq	NM_198839.1	ILMN_176065	ACACA	NM_198839.1	NM_198839.1		31	38679976	NM_198839.1	ACACA	NP_942136.1	ILMN_1667641	0006650328	I	1040	CTCAGAGACAACGTGAAGACGGATAAGCAGGCATCAGGAGCAGAGTGGCC	17	-	35722389-35722438	17q12b	Homo sapiens acetyl-Coenzyme A carboxylase alpha (ACACA), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [pmid 7905825] [evidence TAS]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]; Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein [goid 4075] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16326698] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ACC1; ACAC; ACCA; ACC	ACC; ACC1; ACAC; ACCA
Homo sapiens	RefSeq	XM_495883.2	ILMN_40407	ZNF705D	NM_001039615.3	NM_001039615.3		728957	149944617	NM_001039615.3	ZNF705D	NP_001034704.2	ILMN_1781076	0004050494	A	269	GGACCAGTGGTGGGCAGGGCTCCAGAACTCCAAAGATCATTTTCTCAAGC	8	+	11947115-11947152:11961898-11961909	8p23.1a	Homo sapiens zinc finger protein 705D (ZNF705D), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC131746	
Homo sapiens	RefSeq	XM_496968.2	ILMN_40407	ZNF705D	NM_001039615.3	NM_001039615.3		728957	149944617	NM_001039615.3	ZNF705D	NP_001034704.2	ILMN_1653562	0006840243	S	997	TGACTCACACTGGAGAGAGGCCATATGCATGTCATCTATGTGGAAAAGCC	8	+	11970339-11970388	8p23.1a	Homo sapiens zinc finger protein 705D (ZNF705D), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC131746	
Homo sapiens	RefSeq	XM_933421.1	ILMN_40407	ZNF705D	NM_001039615.3	NM_001039615.3		728957	149944617	NM_001039615.3	ZNF705D	NP_001034704.2	ILMN_1742280	0001850369	I	368	AAGTGTCTGCAAGTGGAAATCCAGAGGAAGACAGAGAGAAACTGAGTTCC	8	+	11965648-11965697	8p23.1a	Homo sapiens zinc finger protein 705D (ZNF705D), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC131746	
Homo sapiens	RefSeq	XM_943550.1	ILMN_35917	LOC339782	XM_943550.1	XM_943550.1		339782	88957947	XM_943550.1	LOC339782	XP_948643.1	ILMN_1694220	0002030768	A	197	GAGACATGGAAAGGGGCTCTACCGAGTTGCTGGAATAGTTGGTGTGTGTC					PREDICTED: Homo sapiens hypothetical LOC339782 (LOC339782), mRNA.					
Homo sapiens	RefSeq	XM_374260.3	ILMN_45045	LOC389641	XM_944097.2	XM_944097.2		389641	113420305	XM_944097.2	LOC389641	XP_949190.1	ILMN_1713141	0000670494	A	1524	CACCATTTCACACATCCTGAGCCTCCATTGTTTTGAGTCAGCTGTCGTTC				8p21.3a	PREDICTED: Homo sapiens hypothetical gene supported by AK124295 (LOC389641), mRNA.					
Homo sapiens	RefSeq	NM_006080.1	ILMN_162328	SEMA3A	NM_006080.2	NM_006080.2		10371	100913215	NM_006080.2	SEMA3A	NP_006071.1	ILMN_1765641	0006900114	S	2587	AACAGGAGGACCCACGAATTTGAGAGGGCACCCAGGAGTGTCTGAGCTGC	7	-	83596418-83596437:83602046-83602075	7q21.11e	Homo sapiens sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A (SEMA3A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8269517] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SEMAIII; SEMAD; MGC133243; SEMA1; Hsema-III; Hsema-I; SemD; sema III; coll-1; SEMAL	SEMA1; sema III; SemD; SEMAIII; SEMAD; Hsema-I; coll-1; SEMAL
Homo sapiens	RefSeq	XM_927200.1	ILMN_39894	LOC650323	XM_944149.1	XM_944149.1		650323	88987229	XM_944149.1	LOC650323	XP_949242.1	ILMN_1669167	0000360630	S	378	GTCCACTCACCATCTGGGAGGGACTTTGGAGGTGGAACCAGCCACCCCCT					PREDICTED: Homo sapiens hypothetical LOC650323 (LOC650323), mRNA.					
Homo sapiens	RefSeq	XM_940517.1	ILMN_174316	LOC653800	XR_017411.1	XR_017411.1		653800	113426027	XR_017411.1	LOC653800		ILMN_1700627	0005900050	S	903	TATCAGAAAGAGGCTGGTGGTCGGGACCAGTAGGAGGATCGCTTGAGTCC	16	-	28692015-28692064	16p11.2e	PREDICTED: Homo sapiens similar to Group 10 secretory phospholipase A2 precursor (Group X secretory phospholipase A2) (Phosphatidylcholine 2-acylhydrolase GX) (GX sPLA2) (sPLA2-X) (LOC653800), mRNA.					
Homo sapiens	RefSeq	XM_001714474.1	ILMN_347403	LOC100133173	XM_001714474.1	XM_001714474.1		100133173	169166364	XM_001714474.1	LOC100133173	XP_001714526.1	ILMN_3245486	0005700554	S	649	TTCAAAGAAATTCTGGAAATTATTCAAATGAGAAGTAATCTTTTTATGTG	4	+	65420328-65420377	4q13.1f	PREDICTED: Homo sapiens hypothetical LOC100133173 (LOC100133173), mRNA.					
Homo sapiens	RefSeq	NM_006706.2	ILMN_9867	TCERG1	NM_006706.3	NM_006706.3		10915	91208416	NM_006706.3	TCERG1	NP_006697.2	ILMN_1706839	0006450538	S	3677	GAACTTGCCAGATGCAAATACCACAGACTCCAAGAAAACCCGAGTTGGGG	5	+	145850284-145850311:145851051-145851072	5q32d	Homo sapiens transcription elongation regulator 1 (TCERG1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9315662] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9315662] [evidence TAS]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9315662] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9315662] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]	MGC133200; TAF2S; CA150	TAF2S; CA150
Homo sapiens	RefSeq	NM_006706.3	ILMN_9867	TCERG1	NM_006706.3	NM_006706.3		10915	91208416	NM_006706.3	TCERG1	NP_006697.2	ILMN_2289301	0004490600	I	1188	TGCAAATAGTCAGCTGCCCGTATGTAAAGACAGTCGCTACCACCAAGACC	5	+	145826885-145826912:145826913-145826934	5q32d	Homo sapiens transcription elongation regulator 1 (TCERG1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9315662] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9315662] [evidence TAS]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9315662] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9315662] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]	MGC133200; TAF2S; CA150	TAF2S; CA150
Homo sapiens	RefSeq	NM_006706.3	ILMN_9867	TCERG1	NM_006706.3	NM_006706.3		10915	91208416	NM_006706.3	TCERG1	NP_006697.2	ILMN_2398039	0004060646	A	3287	CCACCCCCACCTCCCACAGCATCGGAGCCCACGAGACGATCAACAAAATA	5	+	145843345-145843385:145847904-145847912	5q32d	Homo sapiens transcription elongation regulator 1 (TCERG1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9315662] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9315662] [evidence TAS]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9315662] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9315662] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]	MGC133200; TAF2S; CA150	TAF2S; CA150
Homo sapiens	RefSeq	NR_004403.1	ILMN_334008	SNORD97	NR_004403.1	NR_004403.1		692223	161087023	NR_004403.1	SNORD97		ILMN_3242144	0000510040	S	93	CTTTGAATGTCCAGCGTCCTGTGAGCGAAGATTATGAGATATGAGGGCAA					Homo sapiens small nucleolar RNA, C/D box 97 (SNORD97), small nucleolar RNA.				U97	U97
Homo sapiens	RefSeq	NM_003955.3	ILMN_167297	SOCS3	NM_003955.3	NM_003955.3		9021	45439351	NM_003955.3	SOCS3	NP_003946.3	ILMN_2156250	0005260630	S	2236	TGCCTGGGTGGGGGAGGCTGGAGGTCATTGGAGAGGCTGGACTGCTGCCA	17	-	76353307-76353356	17q25.3b	Homo sapiens suppressor of cytokine signaling 3 (SOCS3), mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9266833] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9266833] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of insulin receptor signaling [goid 46627] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [pmid 9266833] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC71791; ATOD4; Cish3; SSI-3; SSI3; SOCS-3; CIS3	MGC71791; ATOD4; Cish3; SSI-3; SSI3; SOCS-3; CIS3
Homo sapiens	RefSeq	NM_014837.3	ILMN_19121	SMG7	NM_173156.1	NM_173156.1		9887	42475557	NM_173156.1	SMG7	NP_775179.1	ILMN_1706553	0006270706	A	5497	CCAGGTTTACCATCTCACTCCCAGTAATACCCAGCTCCTATCTAAAGCCC	1	+	181789650-181789699	1q25.3e	Homo sapiens Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) (SMG7), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14636577] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14636577] [evidence IDA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 16488880] [evidence TAS]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 16488880] [evidence TAS]; Any process that modulates the frequency, rate or extent of removal of phosphate groups from a molecule [goid 35303] [pmid 15721257] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14636577] [evidence IPI]; Interacting selectively with the enzyme protein phosphatase 2A [goid 51721] [pmid 14636577] [evidence IDA]	EST1C; SMG-7; FLJ23717; C1orf16; SGA56M; KIAA0250	EST1C; SMG-7; FLJ23717; C1orf16; SGA56M; KIAA0250
Homo sapiens	RefSeq	NM_173156.1	ILMN_19121	SMG7	NM_173156.1	NM_173156.1		9887	42475557	NM_173156.1	SMG7	NP_775179.1	ILMN_1690469	0005550114	I	1834	GGGACTATAGCAAAGGAATAACTGTAACTAAGAATGATGGAAAGAAGGAC	1	+	181778130-181778179	1q25.3e	Homo sapiens Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) (SMG7), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14636577] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14636577] [evidence IDA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 16488880] [evidence TAS]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 16488880] [evidence TAS]; Any process that modulates the frequency, rate or extent of removal of phosphate groups from a molecule [goid 35303] [pmid 15721257] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14636577] [evidence IPI]; Interacting selectively with the enzyme protein phosphatase 2A [goid 51721] [pmid 14636577] [evidence IDA]	EST1C; SMG-7; FLJ23717; C1orf16; SGA56M; KIAA0250	EST1C; SMG-7; FLJ23717; C1orf16; SGA56M; KIAA0250
Homo sapiens	Unigene	Hs.549823	ILMN_110080	HS.549823	Hs.549823		Hs.549823		5053715	AI732602			ILMN_1846799	0005910129	S	320	GCAGGTTGTTATTGTTGCTGAGCGGGGTGTGTGGGTGGCTAACGAGAGGG	11	+	61276241-61276290		zo26g12.x5 Stratagene colon (#937204) Homo sapiens cDNA clone IMAGE:588070 3, mRNA sequence					
Homo sapiens	RefSeq	NM_202000.2	ILMN_184019	ACSM3	NM_005622.3	NM_005622.3		6296	47458816	NM_005622.3	ACSM3	NP_005613.2	ILMN_1685952	0003840632	A	1229	CACTGTGTGAGTGCTGGGGAACCAATTACCCCTGACGTGACTGAAAAATG	16	+	20703829-20703878	16p12.2c	Homo sapiens acyl-CoA synthetase medium-chain family member 3 (ACSM3), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 7907320] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of a long-chain carboxylic acid to an acceptor, coupled to the hydrolysis of ATP [goid 15645] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	SA; SAH	SA; SAH
Homo sapiens	RefSeq	NM_005622.3	ILMN_184019	ACSM3	NM_005622.3	NM_005622.3		6296	47458816	NM_005622.3	ACSM3	NP_005613.2	ILMN_1771084	0006580735	I	1673	GCCCTGAATGAACACCCTTCAGTTGCAGAGTCAGCTGTTGTCAGCAGCCC	16	+	20711090-20711139	16p12.2c	Homo sapiens acyl-CoA synthetase medium-chain family member 3 (ACSM3), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 7907320] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of a long-chain carboxylic acid to an acceptor, coupled to the hydrolysis of ATP [goid 15645] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	SA; SAH	SA; SAH
Homo sapiens	RefSeq	NM_006141.2	ILMN_183290	DYNC1LI2	NM_006141.2	NM_006141.2		1783	38505264	NM_006141.2	DYNC1LI2	NP_006132.1	ILMN_1783448	0005290131	S	4209	AGCCTTAGTCCAGGGGTGTGGCTCTGTCCGGGTGCAGTATGCAGTCATGT	16	-	66754876-66754925	16q22.1a	Homo sapiens dynein, cytoplasmic 1, light intermediate chain 2 (DYNC1LI2), mRNA.	Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [pmid 7738094] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DNCLI2; LIC2	DNCLI2; LIC2
Homo sapiens	Unigene	Hs.547935	ILMN_109697	HS.547935	Hs.547935		Hs.547935		3678609	AI150140			ILMN_1893053	0005050594	S	250	CATCTGCCAAAGGACCACAACATAAAGGGCCAAATGGGACAGTGGCTTGC	11	+	20646125-20646174		qf44g09.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1752928 3, mRNA sequence					
Homo sapiens	RefSeq	XM_930661.1	ILMN_34417	LOC653050	XM_930661.1	XM_930661.1		653050	89061301	XM_930661.1	LOC653050	XP_935754.1	ILMN_1746659	0004120026	I	572	AGGACACCGCAGAGAAGAGTGACTCTGGCGGTGCAGCGCTGGCTTTCCCA	Y	-	11784477-11784526	Yq11.1b	PREDICTED: Homo sapiens similar to Tektin-3, transcript variant 6 (LOC653050), mRNA.					
Homo sapiens	RefSeq	NM_015517.3	ILMN_168014	HINFP	NM_015517.3	NM_015517.3		25988	39725947	NM_015517.3	HINFP	NP_056332.2	ILMN_1776480	0000990390	I	68	GGGTCTGCCGCCCAGGATGGAGTACAATGGTGTGATCTTGGCTCTTTGCA	11	+	118499493-118499542	11q23.3e	Homo sapiens histone H4 transcription factor (HINFP), transcript variant 1, mRNA.				ZNF743; HiNF-P; DKFZP434F162	ZNF743; HiNF-P; DKFZP434F162
Homo sapiens	RefSeq	NM_001009909.2	ILMN_9497	LUZP2	NM_001009909.2	NM_001009909.2		338645	62821789	NM_001009909.2	LUZP2	NP_001009909.2	ILMN_1727101	0004120692	S	3336	ATTTATGTTCAGTCTCCCACCTCCACCCTGGGGCCCAACTTCCCTTGCAG	11	+	25057842-25057891	11p14.3b-p14.3a	Homo sapiens leucine zipper protein 2 (LUZP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			KFSP2566; PRO6246; FLJ45795	KFSP2566; PRO6246; FLJ45795
Homo sapiens	RefSeq	XM_937684.1	ILMN_40832	LOC648615	XM_937684.1	XM_937684.1		648615	89035919	XM_937684.1	LOC648615	XP_942777.1	ILMN_1811346	0005550433	S	57	CCCCACCCCCGCGTTCCGACCGCTGAAGCTCCAAATTCAGGCCTTAAATA					PREDICTED: Homo sapiens hypothetical protein LOC648615 (LOC648615), mRNA.					
Homo sapiens	RefSeq	XR_016133.2	ILMN_181373	LOC388925	XR_016133.2	XR_016133.2		388925	169162947	XR_016133.2	LOC388925		ILMN_3279964	0003360592	M	1365	AAAATGGTTGGGCGATTCCTCGACCCCTGAAAAGGATGAGGTTGGGGGAG	2	+	17431187-17431236	2p24.2b	PREDICTED: Homo sapiens misc_RNA (LOC388925), miscRNA.					
Homo sapiens	RefSeq	XM_001717513.1	ILMN_353199	LOC100130263	XM_001717513.1	XM_001717513.1		100130263	169210520	XM_001717513.1	LOC100130263	XP_001717565.1	ILMN_3274014	0001820110	M	453	CCAGAAGATTGTTGGCTTCAGTATTCACGTTCCATCGTGTCGTCTGGGTC				16q22.3a	PREDICTED: Homo sapiens similar to coiled-coil domain containing 25 (LOC100130263), mRNA.					
Homo sapiens	RefSeq	XR_017607.1	ILMN_164319	LOC646785	XR_017607.1	XR_017607.1		646785	113417482	XR_017607.1	LOC646785		ILMN_3210538	0001170551	A	32	GCAGAGATGTTGATGCCTAAGAAGAACCGGATTGCCATTTATGAACTCCT	6	+	34819925-34819974	6p21.31d	PREDICTED: Homo sapiens misc_RNA (LOC646785), miscRNA.					
Homo sapiens	RefSeq	XR_017607.1	ILMN_164319	LOC646785	XR_017607.1	XR_017607.1		646785	113417482	XR_017607.1	LOC646785		ILMN_3287033	0006480402	M	497	GGCGGATTTGGTTGTGGACATAGTCAGCTACCTCAGTAAAATTGGAGAGG	6	+	34820390-34820439	6p21.31d	PREDICTED: Homo sapiens misc_RNA (LOC646785), miscRNA.					
Homo sapiens	RefSeq	NM_033304.1	ILMN_17568	ADRA1A	NM_033304.1	NM_033304.1		148	15451760	NM_033304.1	ADRA1A	NP_150647.1	ILMN_1669227	0002690500	I	1574	AGGTAGCTGGAGACCTAGGCAGTCTGCAAATGAGGAGTCAGCTGGAAGCT	8	-	26679429-26679478	8p21.2a	Homo sapiens adrenergic, alpha-1A-, receptor (ADRA1A), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8396931] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction as a result of the baroreceptor response to increased blood pressure [goid 1985] [evidence IEA]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IEA]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IEA]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10671514] [evidence TAS]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 8183249] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8396931] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10860850] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10671514] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8396931] [evidence TAS]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10860850] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA];  [goid 4937] [pmid 9490024] [evidence NAS];  [goid 4937] [pmid 7737411] [evidence TAS]	ADRA1C; ADRA1L1; ALPHA1AAR	ADRA1C; ALPHA1AAR; ADRA1L1
Homo sapiens	RefSeq	NM_015354.1	ILMN_13342	NUP188	NM_015354.1	NM_015354.1		23511	62955802	NM_015354.1	NUP188	NP_056169.1	ILMN_1715416	0007550348	S	5439	CTAGATGAAGAGGTCAACAGCAGGCATGGGGAGCCGAGTCTTCTGTGCTC	9	+	130808945-130808994	9q34.11c	Homo sapiens nucleoporin 188kDa (NUP188), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 12228227] [evidence EXP]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	KIAA0169; FLJ21639	KIAA0169; FLJ21639
Homo sapiens	Unigene	Hs.576557	ILMN_128738	HS.576557	Hs.576557		Hs.576557		78241577	DA162248			ILMN_1846825	0006860435	S	82	CCATGGGAAGGGCAAACACCTGGAAATGGGATTGCTGGGTCATATGGAGG	10	-	128486783-128486788:128488178-128488213:128571981-128571988		DA162248 BRAMY2 Homo sapiens cDNA clone BRAMY2022619 5, mRNA sequence					
Homo sapiens	RefSeq	XM_939618.1	ILMN_35671	LOC650528	XM_939618.1	XM_939618.1		650528	89059277	XM_939618.1	LOC650528	XP_944711.1	ILMN_1726002	0001070626	S	458	AATGAGGAGACTTACAGGGTGCGAACATTCCAGATAGGTACAGGGGAGAA					PREDICTED: Homo sapiens similar to Ral guanine nucleotide dissociation stimulator (RalGEF) (RalGDS) (LOC650528), mRNA.					
Homo sapiens	RefSeq	NM_025169.1	ILMN_26551	ZNF167	NM_025169.1	NM_025169.1		55888	47716684	NM_025169.1	ZNF167	NP_079445.1	ILMN_1794597	0003830528	I	1626	GTGGCGGAGTTGTGCCACCTACATGAGCCAATGGAGAAGAAAGCTCCTGG	3	+	44598522-44598539:44598540-44598571	3p21.32b	Homo sapiens zinc finger protein 167 (ZNF167), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12738; ZNF64; ZFP; ZNF448; ZKSCAN7	FLJ12738; ZFP; ZKSCAN7; ZNF64; ZNF448
Homo sapiens	RefSeq	NM_014975.1	ILMN_14016	MAST1	NM_014975.1	NM_014975.1		22983	45120118	NM_014975.1	MAST1	NP_055790.1	ILMN_1733366	0006420114	S	4707	CCTGACCAAAAAAGGAGTGTCCAGTCCCGCACCCCCGGGACCATAGCCAA	19	+	12846639-12846684:12846685-12846688	19p13.13c	Homo sapiens microtubule associated serine/threonine kinase 1 (MAST1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence ISS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SAST170; SAST; KIAA0973	SAST170; SAST; KIAA0973
Homo sapiens	RefSeq	NR_002744.1	ILMN_7262	SNORD49A	NR_002744.1	NR_002744.1		26800	84872024	NR_002744.1	SNORD49A		ILMN_3248562	0001240324	S	17	CTAATAGGAAGTGCCGTCAGAAGCGATAACTGACGAAGACTACTCCTGTC	17	+	16284091-16284140	17p11.2i	Homo sapiens small nucleolar RNA, C/D box 49A (SNORD49A), small nucleolar RNA.				U49; U49A; RNU49	U49; U49A; RNU49
Homo sapiens	RefSeq	XM_928554.1	ILMN_42179	LOC645535	XM_928554.1	XM_928554.1		645535	89027770	XM_928554.1	LOC645535	XP_933647.1	ILMN_1704858	0003840368	S	213	CCGGGGGCCCTGAAACAAGGATAAGGGAGAGAAGGAAGAGAGACCAAGGC	8	-	7411016-7411018:7411475-7411521		PREDICTED: Homo sapiens hypothetical protein LOC645535 (LOC645535), mRNA.					
Homo sapiens	RefSeq	NM_145056.1	ILMN_8584	DACT3	NM_145056.1	NM_145056.1		147906	21450823	NM_145056.1	DACT3	NP_659493.1	ILMN_1733851	0001990196	S	2449	GACTCCCCAGTGCAAAGGGGGGCCAGATTCTGTGTGTTTCTCTAACCTCT	19	-	51842736-51842785	19q13.32b	Homo sapiens dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis) (DACT3), mRNA.				MGC15476; RRR1	MGC15476; RRR1
Homo sapiens	RefSeq	NM_033630.1	ILMN_11475	SCAND1	NM_033630.1	NM_033630.1		51282	15967155	NM_033630.1	SCAND1	NP_361012.1	ILMN_2372011	0000240546	A	173	AGAAACTGGAAGGAGCCGGTTCGAGCTCAGCCCCTGAGCGTAACTGTGTG	20	-	34542098-34542147	20q11.23a	Homo sapiens SCAN domain containing 1 (SCAND1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	RAZ1; SDP1	RAZ1; SDP1
Homo sapiens	RefSeq	XM_930635.1	ILMN_163214	LOC729744	XM_001134034.1	XM_001134034.1		729744	113417791	XM_001134034.1	LOC729744	XP_001134034.1	ILMN_1657274	0001770692	I	845	CAGTTGTAGTAACTGGTTATATGACCAACAAAATATGAAGAATGGGTACA	6	+	170788342-170788391	6q27f	PREDICTED: Homo sapiens hypothetical protein LOC729744 (LOC729744), mRNA.					
Homo sapiens	RefSeq	XM_496791.2	ILMN_163214	LOC729744	XM_001134034.1	XM_001134034.1		729744	113417791	XM_001134034.1	LOC729744	XP_001134034.1	ILMN_1795744	0005900040	A	673	GTGGAAGAGACTTGCCCTGTCTCAGGAATTAGAGAAAGAACAAATCAGTG	6	+	170778304-170778328:170788195-170788201:170788202-170788219	6q27f	PREDICTED: Homo sapiens hypothetical protein LOC729744 (LOC729744), mRNA.					
Homo sapiens	RefSeq	XM_933816.1	ILMN_163214	LOC729744	XM_001134034.1	XM_001134034.1		729744	113417791	XM_001134034.1	LOC729744	XP_001134034.1	ILMN_1663065	0000540307	I	726	AGGAGAATTGTCAGTAAAATTACAAGAAAAGATTGAGATCATAATTGACC	6	+	170788223-170788272	6q27f	PREDICTED: Homo sapiens hypothetical protein LOC729744 (LOC729744), mRNA.					
Homo sapiens	RefSeq	XM_929715.1	ILMN_37364	LOC646764	XM_929715.1	XM_929715.1		646764	89052462	XM_929715.1	LOC646764	XP_934808.1	ILMN_1698552	0003180168	S	121	ATGACACAGGTGGCTCTCCGCTGGCTAGAAGCCCATGCACCAACAGACAT	19	+	20588040-20588089		PREDICTED: Homo sapiens hypothetical protein LOC646764 (LOC646764), mRNA.					
Homo sapiens	RefSeq	XM_001724912.1	ILMN_343089	LOC652900	XM_001724912.1	XM_001724912.1		652900	169218070	XM_001724912.1	LOC652900	XP_001724964.1	ILMN_3242174	0004280181	S	296	AGGGCTTTGAGCTTATCGGCGAGGTCACCATCACCTGTGTGCCCGGCCAC					PREDICTED: Homo sapiens similar to SEZ6L2 protein (LOC652900), mRNA.					
Homo sapiens	Unigene	Hs.572875	ILMN_125056	HS.572875	Hs.572875		Hs.572875		11682820	BF590496			ILMN_1862612	0004200168	S	160	GACCAAAATAAAGGGAAAGACATCCCATGTTCATGGATTGGAAGAGTTGT					7h36c01.x1 NCI_CGAP_Co16 Homo sapiens cDNA clone IMAGE:3318048 3 similar to contains L1.t2 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	XM_066484.1	ILMN_19488	LOC139116	XM_066484.1	XM_066484.1		139116	17459487	XM_066484.1	LOC139116	XP_066484.1	ILMN_1737247	0003850739	S	105	CGTGGCCTTCCGCTCGCGGCCGTGGAACGAGGTAGAGGACAGCCTTCAGG	X	+	123294553-123294602		PREDICTED: Homo sapiens similar to testis expressed sequence 13A (LOC139116), mRNA.					
Homo sapiens	RefSeq	NR_029886.1	ILMN_388252	MIR330	NR_029886.1	NR_029886.1		442902	262206322	NR_029886.1	MIR330		ILMN_3308158	0000730181	S	16	CTCTCTGGGCCTGTGTCTTAGGCTCTGCAAGATCAACCGAGCAAAGCACA				19q13.32a	Homo sapiens microRNA 330 (MIR330), microRNA.					
Homo sapiens	RefSeq	NR_029898.1	ILMN_388277	MIR339	NR_029898.1	NR_029898.1		442907	262206373	NR_029898.1	MIR339		ILMN_3309189	0002260711	S	18	TGTCCTCCAGGAGCTCACGTGTGCCTGCCTGTGAGCGCCTCGACGACAGA				7p22.3c	Homo sapiens microRNA 339 (MIR339), microRNA.					
Homo sapiens	RefSeq	NM_198141.2	ILMN_161969	GANC	NM_198141.2	NM_198141.2		2595	66346736	NM_198141.2	GANC	NP_937784.2	ILMN_1812256	0006420722	S	4287	CCCACTTTCCCATGAAGCCTAACTGCGTGAACACCCCTACCCCCATACCC	15	+	40432857-40432906	15q15.1d	Homo sapiens glucosidase, alpha; neutral C (GANC), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing 1,4-linked alpha-D-glucose residues with release of alpha-D-glucose [goid 4558] [pmid 12370436] [evidence NAS]	MGC138256	MGC138256
Homo sapiens	RefSeq	XM_001718636.1	ILMN_338391	LOC100131509	XM_001718636.1	XM_001718636.1		100131509	169217810	XM_001718636.1	LOC100131509	XP_001718688.1	ILMN_3238425	0007560167	S	2332	CCCTTCCACAGTGAAGGGTGGTTAGGAGCCACAGGCCGGGATGGCTCCTT					PREDICTED: Homo sapiens similar to inward rectifying K+ channel negative regulator Kir2.2v (LOC100131509), mRNA.					
Homo sapiens	RefSeq	NM_031464.2	ILMN_9567	RPS6KL1	NM_031464.3	NM_031464.3		83694	93277120	NM_031464.3	RPS6KL1	NP_113652.1	ILMN_1667125	0007330008	S	2747	TTCCACTAGAGTTTTGCCCTCAGCTCCTCCCTGCCAGCATCCCAGTCACC	14	-	75372566-75372615	14q24.3b	Homo sapiens ribosomal protein S6 kinase-like 1 (RPS6KL1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ35734; MGC11287	MGC11287
Homo sapiens	RefSeq	XM_927570.1	ILMN_164004	LOC729444	XM_001130267.1	XM_001130267.1		729444	113429302	XM_001130267.1	LOC729444	XP_001130267.1	ILMN_1697527	0002190703	A	47	CTGCATTCAAGGTGACTCGAAGAAGCCTTCCAAAAAGCGTGTGAAAAGGA	22	+	18705683-18705693:18708520-18708558	22q11.21d	PREDICTED: Homo sapiens hypothetical LOC729444 (LOC729444), mRNA.					
Homo sapiens	RefSeq	XM_931189.1	ILMN_164004	LOC729444	XM_001130267.1	XM_001130267.1		729444	113429302	XM_001130267.1	LOC729444	XP_001130267.1	ILMN_1651351	0002360347	A	57	GGTGACTCGAAGAAGCCTTCCAAAAAGCGTGTGAAAAGGAAGCCCTACTC	22	+	18705693-18705693:18708520-18708568	22q11.21d	PREDICTED: Homo sapiens hypothetical LOC729444 (LOC729444), mRNA.					
Homo sapiens	RefSeq	XM_927785.1	ILMN_164004	LOC729444	XM_001130267.1	XM_001130267.1		729444	113429302	XM_001130267.1	LOC729444	XP_001130267.1	ILMN_1663245	0005130242	A	19	TGATTTTTCTTATGGGGAACCTGTGTGGCTGCATTCAAGGTGACTCGAAG	22	+	18705655-18705665:18705666-18705693:18708520-18708530	22q11.21d	PREDICTED: Homo sapiens hypothetical LOC729444 (LOC729444), mRNA.					
Homo sapiens	RefSeq	NM_203411.1	ILMN_9545	TMEM88	NM_203411.1	NM_203411.1		92162	44662812	NM_203411.1	TMEM88	NP_981956.1	ILMN_1757129	0000540288	S	698	CTCAATCCTGAACATCTAGGCTGGAACCTGCACACCTCCCCCTCAGCTCC	17	+	7699966-7700015	17p13.1d	Homo sapiens transmembrane protein 88 (TMEM88), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC71744; FLJ20025	MGC71744; FLJ20025
Homo sapiens	RefSeq	XM_945018.1	ILMN_35566	LOC649030	XM_945018.1	XM_945018.1		649030	88952273	XM_945018.1	LOC649030	XP_950111.1	ILMN_1684377	0000240112	I	280	CCAACCCTGCTGACACCTTAATCTCAGGCTTCTGGACTCACGAATTGTGA					PREDICTED: Homo sapiens hypothetical protein LOC649029, transcript variant 1 (LOC649030), mRNA.					
Homo sapiens	RefSeq	XM_944520.1	ILMN_45903	LOC651131	XM_944520.1	XM_944520.1		651131	88968935	XM_944520.1	LOC651131	XP_949613.1	ILMN_1666087	0006180327	S	539	TCAGGATGAACTGCCCGGCGAGAGTGCAGGCGCTGAGGACAGCGACGATC					PREDICTED: Homo sapiens hypothetical protein LOC651131 (LOC651131), mRNA.					
Homo sapiens	RefSeq	NM_021202.1	ILMN_28839	TP53INP2	NM_021202.1	NM_021202.1		58476	39930398	NM_021202.1	TP53INP2	NP_067025.1	ILMN_1686906	0005360392	S	3827	TGCAGACACACCATAGCCCCCTTCTACTACTTTCCCTCTCGCCCTGCCAC	20	+	32764601-32764650	20q11.22b	Homo sapiens tumor protein p53 inducible nuclear protein 2 (TP53INP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			DKFZp434O0827; FLJ23500; dJ1181N3.1; DKFZp434B2411; PINH; FLJ21759; C20orf110	DKFZp434O0827; FLJ23500; dJ1181N3.1; DKFZp434B2411; PINH; FLJ21759; C20orf110
Homo sapiens	RefSeq	NR_029671.1	ILMN_387826	MIR125B1	NR_029671.1	NR_029671.1		406911	262205263	NR_029671.1	MIR125B1		ILMN_3308118	0007320341	S	35	ATGTTTACCGTTTAAATCCACGGGTTAGGCTCTTGGGAGCTGCGAGTCGT				11q24.1a	Homo sapiens microRNA 125b-1 (MIR125B1), microRNA.					
Homo sapiens	RefSeq	NM_145814.1	ILMN_17399	CACNG6	NM_145814.1	NM_145814.1		59285	22027553	NM_145814.1	CACNG6	NP_665813.1	ILMN_1809676	0004830167	I	1083	AAAGGTGCAGAGTTCCTGCTCCGAGTTGGAGCCGTCTGCTTTGGCCTCTC	19	+	54502974-54503023	19q13.42a	Homo sapiens calcium channel, voltage-dependent, gamma subunit 6 (CACNG6), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 11170751] [evidence NAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 11170751] [evidence NAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 11170751] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	XM_931239.1	ILMN_38405	LOC643012	XM_931239.1	XM_931239.1		643012	89038648	XM_931239.1	LOC643012	XP_936332.1	ILMN_1687202	0005270487	S	275	CATTGCTTCTGCTCCAAAAGCAAAAGACTTGGGAAGGGCACCCTGGGAGT	15	-	84432560-84432578:84451770-84451800		PREDICTED: Homo sapiens hypothetical protein LOC643012 (LOC643012), mRNA.					
Homo sapiens	RefSeq	NM_022765.2	ILMN_18994	MICAL1	NM_022765.2	NM_022765.2		64780	20127615	NM_022765.2	MICAL1	NP_073602.2	ILMN_1807972	0003800551	S	3423	GGTGGATTTGGTCAACCAGAGAGATGCCCTCATCCGCTTCCAGGAGGAGC	6	-	109872130-109872179	6q21f	Homo sapiens microtubule associated monoxygenase, calponin and LIM domain containing 1 (MICAL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11827972] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 11827972] [evidence NAS]	The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 11827972] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11827972] [evidence NAS]; The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11827972] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence ISS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 11827972] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NICAL; DKFZp434B1517; FLJ21739; FLJ11937; MICAL-1; MICAL	NICAL; DKFZp434B1517; MICAL-1; MICAL; FLJ21739; FLJ11937
Homo sapiens	RefSeq	NM_018025.2	ILMN_5724	GPATCH1	NM_018025.2	NM_018025.2		55094	21361683	NM_018025.2	GPATCH1	NP_060495.2	ILMN_1655625	0003400202	S	3059	GCCCCAGGAGCTGCTGAGACGGCTGAAAAGTCTTCCACTAAGAAGGCAGT	19	+	33617619-33617639:33621036-33621064	19q13.11b	Homo sapiens G patch domain containing 1 (GPATCH1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ38686; FLJ34516; FLJ10206; GPATC1; ECGP	FLJ38686; FLJ34516; FLJ10206; GPATC1; ECGP
Homo sapiens	RefSeq	NM_018439.1	ILMN_182121	IMPACT	NM_018439.2	NM_018439.2		55364	142381728	NM_018439.2	IMPACT	NP_060909.1	ILMN_1668432	0006620435	S	3170	GATCTTCCTGCCAAGGTTTTGGAATTACAGGTGTGAGCCACCATGCCTGG	18	+	20286977-20287026	18q11.2c	Homo sapiens Impact homolog (mouse) (IMPACT), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC33718	MGC33718
Homo sapiens	RefSeq	NM_030672.2	ILMN_22145	ARHGAP28	NM_030672.2	NM_030672.2		79822	59710110	NM_030672.2	ARHGAP28	NP_109597.2	ILMN_1797753	0004670753	A	1646	CGGAAGGAGTCATACGGGTCCATGCTCCACTTCTCTCCAAGGTGTCCATG	18	+	6870673-6870722	18p11.31a	Homo sapiens Rho GTPase activating protein 28 (ARHGAP28), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	FLJ10312; DKFZp686A2038	FLJ10312; DKFZp686A2038
Homo sapiens	RefSeq	NM_030672.2	ILMN_22145	ARHGAP28	NM_030672.2	NM_030672.2		79822	59710110	NM_030672.2	ARHGAP28	NP_109597.2	ILMN_1731178	0001850521	I	1832	CGACAGAGACCAACAGGAGCCCCAAACATGTATTCCTCTTCACTATTGGC	18	+	6872263-6872298:6873408-6873421	18p11.31a	Homo sapiens Rho GTPase activating protein 28 (ARHGAP28), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	FLJ10312; DKFZp686A2038	FLJ10312; DKFZp686A2038
Homo sapiens	RefSeq	NM_021023.4	ILMN_5878	CFHR3	NM_021023.4	NM_021023.4		10878	118421081	NM_021023.4	CFHR3	NP_066303.2	ILMN_2071598	0004560753	S	676	TGGTCAGCACAACCAATTTGCATTAATTCTTCAGAAAAGTGTGGGCCTCC	1	+	195024127-195024151:195025798-195025822	1q31.3c	Homo sapiens complement factor H-related 3 (CFHR3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8428964] [evidence TAS]			FHR3; DOWN16; HLF4; CFHL3; FHR-3	FHR3; DOWN16; CFHL3; HLF4; FHR-3
Homo sapiens	RefSeq	XM_945148.1	ILMN_33380	LOC649604	XM_945148.1	XM_945148.1		649604	88979565	XM_945148.1	LOC649604	XP_950241.1	ILMN_1661399	0002060528	I	2	GCGCGGCGCCTGCCAGGCGCCCAGTCCTCCGCCATCGCCCACGCCTCCCT					PREDICTED: Homo sapiens similar to ADP-ribosylation factor-like protein 4A, transcript variant 2 (LOC649604), mRNA.					
Homo sapiens	RefSeq	NM_022096.4	ILMN_9924	ANKRD5	NM_022096.4	NM_022096.4		63926	38569425	NM_022096.4	ANKRD5	NP_071379.3	ILMN_1728957	0000290450	A	3108	TTGAGCTCAGGCAGTCCTCCCAACTTGGCCGTCGAAAGTGCTGGGATTAT	20	+	9984692-9984741	20p12.2b	Homo sapiens ankyrin repeat domain 5 (ANKRD5), transcript variant 1, mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	dJ839B4.6; FLJ21669	dJ839B4.6; FLJ21669
Homo sapiens	RefSeq	NM_005788.1	ILMN_1018	PRMT3	NM_005788.1	NM_005788.1		10196	44771197	NM_005788.1	PRMT3	NP_005779.1	ILMN_1662964	0006760133	S	2385	CCCTCTTTGTGACTATTCCTTAGCCTTATAGATTTCTAGTACTGCCCAGG	11	+	20487134-20487183	11p15.1b	Homo sapiens protein arginine methyltransferase 3 (PRMT3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9642256] [evidence NAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to an amino group of an arginine residue in a protein substrate [goid 16274] [pmid 9642256] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]	HRMT1L3	HRMT1L3
Homo sapiens	RefSeq	NM_181443.1	ILMN_22115	BTBD3	NM_181443.1	NM_181443.1		22903	31317208	NM_181443.1	BTBD3	NP_852108.1	ILMN_1666653	0004900687	I	31	GCTGGATCTCCGAGTGCCCCGGCCGGGGCCTGAGGAGCGGGCACAGGGCA	20	+	11819507-11819556	20p12.2a	Homo sapiens BTB (POZ) domain containing 3 (BTBD3), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	dJ742J24.1; KIAA0952; MGC130039; MGC130038	dJ742J24.1; KIAA0952; MGC130039; MGC130038
Homo sapiens	RefSeq	NR_003009.1	ILMN_181027	SCARNA8	NR_003009.1	NR_003009.1		677776	91982752	NR_003009.1	SCARNA8		ILMN_3247159	0002600403	S	41	CTTGTCACCATGCCTCCCTAGAATAAACTGCCTTTTGATGACCGGGACGA	9	-	19063694-19063743	9p22.1b	Homo sapiens small Cajal body-specific RNA 8 (SCARNA8), guide RNA.				U92	U92
Homo sapiens	RefSeq	NM_006873.2	ILMN_7439	STON1	NM_006873.2	NM_006873.2		11037	26787992	NM_006873.2	STON1	NP_006864.2	ILMN_1668592	0004230730	S	5527	GACCCTCTGTCAGGCATATGTCAGGCTCCACTCTTAAGGAGTCAGTGACC	2	+	48679254-48679303	2p16.3d	Homo sapiens stonin 1 (STON1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [pmid 11454741] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp781K2462; SBLF; STNB1; stoned-b1	DKFZp781K2462; SBLF; STNB1; stoned-b1
Homo sapiens	RefSeq	XM_928603.1	ILMN_44144	LOC650861	XM_939947.2	XM_939947.2		650861	113421912	XM_939947.2	LOC650861	XP_945040.2	ILMN_1688776	0001660114	S	181	GATCCTCAGCAGAAATTGCTTCTGGAATGCACCTATGGAGCCCTGGAGAG					PREDICTED: Homo sapiens similar to CG3523-PA (LOC650861), mRNA.					
Homo sapiens	RefSeq	NM_001011515.1	ILMN_11791	PDLIM5	NM_001011515.1	NM_001011515.1		10611	58533158	NM_001011515.1	PDLIM5	NP_001011515.1	ILMN_2412281	0000380523	A	389	ACTCTGCAAAGAGCATCTGCTGCACCCAAGCCTGAGCCGGTTCCTGTTCA	4	+	95445016-95445026:95494502-95494540	4q22.3a	Homo sapiens PDZ and LIM domain 5 (PDLIM5), transcript variant 4, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 11256614] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 11256614] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with protein kinase C [goid 5080] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with actinin, any member of a family of proteins that crosslink F-actin [goid 42805] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with protein kinase C [goid 5080] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with actinin, any member of a family of proteins that crosslink F-actin [goid 42805] [evidence ISS]	ENH; LIM; L9; ENH1	ENH; LIM; L9; ENH1
Homo sapiens	RefSeq	NM_004580.3	ILMN_165060	RAB27A	NM_004580.3	NM_004580.3		5873	34485707	NM_004580.3	RAB27A	NP_004571.2	ILMN_2329773	0000110010	A	2663	GAGGAAAAGATTTAGACATTTCAAGAGCAGGGTTGGCCAGGCGCGGTGGC	15	-	55495903-55495952	15q21.3b	Homo sapiens RAB27A, member RAS oncogene family (RAB27A), transcript variant 1, mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 11266474] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [pmid 11266474] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IEA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IEA]; The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a cytotoxic T cell [goid 43316] [evidence IEA]; The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell [goid 43320] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9066979] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a class V myosin; myosin V is a dimeric molecule involved in intracellular transport [goid 31489] [evidence IEA]	RAB27; HsT18676; GS2; MGC117246; RAM	RAB27; HsT18676; GS2; MGC117246; RAM
Homo sapiens	RefSeq	NM_001629.2	ILMN_3192	ALOX5AP	NM_001629.2	NM_001629.2		241	15718674	NM_001629.2	ALOX5AP	NP_001620.2	ILMN_1797875	0003930343	S	664	TCTATTGGCCATCTGGGCTTCACAGCTTGAGTTAACCTTGCTTTTCCGGG	13	+	30236347-30236396	13q12.3c	Homo sapiens arachidonate 5-lipoxygenase-activating protein (ALOX5AP), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 2300173] [evidence TAS]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [pmid 2300173] [evidence TAS]; Increases the activity of an enzyme [goid 8047] [pmid 2300173] [evidence TAS]	FLAP	FLAP
Homo sapiens	RefSeq	NM_139025.2	ILMN_4294	ADAMTS13	NM_139025.2	NM_139025.2		11093	73695933	NM_139025.2	ADAMTS13	NP_620594.1	ILMN_2286570	0001240470	I	3863	CCCACGAAGAAGCCGCTGCTCCAGGACGGACCACAGCCACCCCTGCTGGT	9	+	135310397-135310446	9q34.2a	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 13 (ADAMTS13), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 11557746] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 11557746] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 11535495] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 11557746] [evidence NAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11557746] [evidence NAS]; The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9100] [pmid 11557746] [evidence NAS]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [pmid 11557746] [evidence TAS]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [pmid 11557746] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another [goid 43171] [pmid 11535495] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 11557746] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 11557746] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12775718] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11557746] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	FLJ42993; C9orf8; MGC118900; VWFCP; DKFZp434C2322; MGC118899; vWF-CP; TTP	FLJ42993; C9orf8; MGC118900; VWFCP; DKFZp434C2322; MGC118899; vWF-CP; TTP
Homo sapiens	RefSeq	XM_379273.2	ILMN_32170	FLJ14186	XM_379273.2	XM_379273.2		401149	88976720	XM_379273.2	FLJ14186	XP_379273.2	ILMN_1743483	0006450239	S	3378	CACACCCAGCTCTTGCCTCTGAGTGGCCTCTCCAGGAGCAAAACTTTCTC	4	-	120548221-120548270	4q26f	PREDICTED: Homo sapiens hypothetical gene supported by AK024248; AL137733 (FLJ14186), mRNA.					
Homo sapiens	RefSeq	NR_004387.1	ILMN_352145	SCARNA10	NR_004387.1	NR_004387.1		692148	161087007	NR_004387.1	SCARNA10		ILMN_3246209	0002760332	S	231	CAGGGCATGTTCAGGGTATCAGGGCCAAGGGTCCTAAAGGACTTAGCTTG	12	+	6619618-6619667		Homo sapiens small Cajal body-specific RNA 10 (SCARNA10), guide RNA.				U85	U85
Homo sapiens	RefSeq	NM_001014839.1	ILMN_10498	NCDN	NM_001014839.1	NM_001014839.1		23154	62526028	NM_001014839.1	NCDN	NP_001014839.1	ILMN_2359500	0000160390	A	2904	AGGCCTGGTGGGGGGTGGGGAAACCTCCTTCCACCTGAGCTTGCTTGAAG	1	+	35804438-35804487	1p34.3e	Homo sapiens neurochondrin (NCDN), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IEA]		KIAA0607	KIAA0607
Homo sapiens	RefSeq	XM_937048.1	ILMN_39623	LOC647993	XM_937048.1	XM_937048.1		647993	89033514	XM_937048.1	LOC647993	XP_942141.1	ILMN_1764654	0006350280	S	65	AGGGAGCCATTCATGCCGTGGAGGAAGTGGTGAAGGAGGTGGTGGGACAC					PREDICTED: Homo sapiens hypothetical protein LOC647993 (LOC647993), mRNA.					
Homo sapiens	RefSeq	NM_001014372.2	ILMN_25491	CHR415SYT	NM_001014372.2	NM_001014372.2		401135	75677553	NM_001014372.2	CHR415SYT	NP_001014394.1	ILMN_2088673	0000240167	S	1966	GCAACGATTCCTCAGAACAGTGTCGCAAGATCTTTATTTCCTCCGAAGTA	4	-	68609535-68609584	4q13.2b	Homo sapiens chr415 synaptotagmin (CHR415SYT), mRNA.				sytdep	sytdep
Homo sapiens	RefSeq	NM_002904.5	ILMN_13522	RDBP	NM_002904.5	NM_002904.5		7936	67906819	NM_002904.5	RDBP	NP_002895.3	ILMN_1765532	0001820538	S	1509	ACATGGCCAGTGCCTGTTCCCCACTCCCTTGCCCCAAAAGGATCTGGAAC	6	-	32027845-32027894	6p21.32b	Homo sapiens RD RNA binding protein (RDBP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2119325] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2119325] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	RDP; NELF-E; D6S45; RD	RDP; NELF-E; D6S45; RD
Homo sapiens	RefSeq	NM_015049.1	ILMN_21571	TRAK2	NM_015049.1	NM_015049.1		66008	13027379	NM_015049.1	TRAK2	NP_055864.1	ILMN_1781691	0000110075	S	6270	CAGTGTGATAACTGAGCGGTCGCATGGCAGAGGACATCCCCCTCAGAGTG	2	-	201950317-201950366	2q33.1f	Homo sapiens trafficking protein, kinesin binding 2 (TRAK2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12034717] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12034717] [evidence ISS]		Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [pmid 15644324] [evidence NAS]	KIAA0549; GRIF1; ALS2CR3; OIP98; GRIF-1; CALS-C	OIP98; GRIF-1; KIAA0549; GRIF1; ALS2CR3; CALS-C
Homo sapiens	RefSeq	XM_001721696.1	ILMN_341274	LOC729028	XM_001721696.1	XM_001721696.1		729028	169162059	XM_001721696.1	LOC729028	XP_001721748.1	ILMN_3300850	0002100040	M	688	CAGTGGCCTCTTTAGGCCAAGCTCATGCTTCACAAGGGCCTTTCCAGGCT				1q42.13b	PREDICTED: Homo sapiens hypothetical LOC729028 (LOC729028), mRNA.					
Homo sapiens	RefSeq	XM_001714861.1	ILMN_353128	ZNF66	XM_001714861.1	XM_001714861.1		7617	169213819	XM_001714861.1	ZNF66	XP_001714913.1	ILMN_3230253	0001500008	A	2243	GCATCACAGTGGAAACCTGTTCCCTGTCCACCACTCATCCATCAGAGTGG				19p12d	PREDICTED: Homo sapiens zinc finger protein 66 (ZNF66), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_153005.1	ILMN_21548	RIOK1	NM_153005.1	NM_153005.1		83732	23510357	NM_153005.1	RIOK1	NP_694550.1	ILMN_1670318	0003870370	I	74	GTTCAGATTTTTCCCTCCAGTTGGTTTAATTTCTATTTCCTAAAACATTA	6	+	7347952-7348001	6p24.3c	Homo sapiens RIO kinase 1 (yeast) (RIOK1), transcript variant 2, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ30006; MGC12903; AD034; bA288G3.1	FLJ30006; MGC12903; AD034; bA288G3.1
Homo sapiens	RefSeq	NM_000320.1	ILMN_26096	QDPR	NM_000320.1	NM_000320.1		5860	4506358	NM_000320.1	QDPR	NP_000311.1	ILMN_1672443	0006900450	S	1085	GGTGTCATGTTGGATCGCTTTGTGACTGTTCATCTGTCCTTGACAGTGGC	4	-	17097498-17097547	4p15.32b	Homo sapiens quinoid dihydropteridine reductase (QDPR), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 3033643] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IEA]; The chemical reactions and pathways involving dihydrobiopterin, a reduced pteridine derivative related to folic acid; it acts as an electron carrier in tyrosine biosynthesis and its quinoid form is produced by oxidation of tetrahydrobiopterin in several biological hydroxylation reactions [goid 51066] [pmid 3033643] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: NADP+ + 5,6,7,8-tetrahydropteridine = NADPH + H+ + 6,7-dihydropteridine [goid 4155] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADP+ + 5,6,7,8-tetrahydropteridine = NADPH + H+ + 6,7-dihydropteridine [goid 4155] [pmid 3033643] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 3033643] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ42391; DHPR; PKU2	FLJ42391; DHPR; PKU2
Homo sapiens	RefSeq	XR_001035.1	ILMN_163706	LOC641518	XR_017788.1	XR_017788.1		641518	113416203	XR_017788.1	LOC641518		ILMN_1707904	0000450435	A	1321	GGGGCTATATTCTCAGGCTTCCTGGGCTCTGTTGGCATTGGGCAAGCACG				4q25b	PREDICTED: Homo sapiens hypothetical protein LOC641518 (LOC641518), misc RNA.					
Homo sapiens	RefSeq	XM_932559.1	ILMN_163706	LOC641518	XR_017788.1	XR_017788.1		641518	113416203	XR_017788.1	LOC641518		ILMN_1702167	0005090148	S	474	TTGGGAACGACTTTTTCACGGTCCCACGAGTTCCCTGATACCCCGGAGGG				4q25b	PREDICTED: Homo sapiens hypothetical protein LOC641518 (LOC641518), misc RNA.					
Homo sapiens	RefSeq	NM_033255.2	ILMN_27754	EPSTI1	NM_033255.2	NM_033255.2		94240	50428918	NM_033255.2	EPSTI1	NP_150280.1	ILMN_2388547	0005700725	A	1287	GGGAGTCACTTGATGCTTTCAGGTTAATCAGAGCTATGGGTGCTACAGGC	13	-	43462293-43462342	13q14.11c-q14.11d	Homo sapiens epithelial stromal interaction 1 (breast) (EPSTI1), transcript variant 2, mRNA.				BRESI1; MGC29634	BRESI1; MGC29634
Homo sapiens	RefSeq	NM_002827.2	ILMN_5417	PTPN1	NM_002827.2	NM_002827.2		5770	18104977	NM_002827.2	PTPN1	NP_002818.1	ILMN_1681591	0004390703	S	3016	ACCCTGCAGAGCTATGGTGAGGTGTGGATAAGGCTTAGGTGCCAGGCTGT	20	+	48634193-48634242	20q13.13e-q13.13f	Homo sapiens protein tyrosine phosphatase, non-receptor type 1 (PTPN1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10748206] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 10748206] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12907755] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17159996] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11106648] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291744] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17159996] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PTP1B	PTP1B
Homo sapiens	RefSeq	NM_019101.2	ILMN_19748	APOM	NM_019101.2	NM_019101.2		55937	22091451	NM_019101.2	APOM	NP_061974.2	ILMN_1731941	0003830022	S	499	GCGCTTTCTCCTCTACAATCGCTCACCACATCCTCCCGAAAAGTGTGTGG	6	+	31625239-31625255:31625402-31625434	6p21.33a	Homo sapiens apolipoprotein M (APOM), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10531326] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 10531326] [evidence TAS]; The chemical reactions and pathways involving membrane lipids, any lipid found in or associated with a biological membrane [goid 6643] [pmid 10531326] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [pmid 10531326] [evidence TAS]	G3a; HSPC336; NG20; MGC22400	G3a; HSPC336; NG20; MGC22400
Homo sapiens	RefSeq	XM_001134369.2	ILMN_178045	LOC730107	XM_001134369.2	XM_001134369.2		730107	169162600	XM_001134369.2	LOC730107	XP_001134369.1	ILMN_3221072	0005820021	A	539	AACTAGATGAACTTATGAGTGAAGAAGCATATGAGAAATACATAAAATCT	1	-	166291774-166291823	1q24.2a	PREDICTED: Homo sapiens similar to Glycine cleavage system H protein, mitochondrial (LOC730107), mRNA.					
Homo sapiens	RefSeq	NM_178536.3	ILMN_41412	LCN12	NM_178536.3	NM_178536.3		286256	89886463	NM_178536.3	LCN12	NP_848631.2	ILMN_2172933	0006940646	S	380	ACAGCGACTACACCCAGTTCGCCCTGATGCTGTCCCGCAGACACACGAGC	9	+	138968157-138968206	9q34.3e	Homo sapiens lipocalin 12 (LCN12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC48935; MGC34753	MGC48935; MGC34753
Homo sapiens	Unigene	Hs.569304	ILMN_121485	HS.569304	Hs.569304		Hs.569304		79822811	DA193949			ILMN_1837522	0005340446	S	294	CCGGCAGACTGATGAAGACAGCCAACACAGCACCTCGCATCGGCTCTGAA	13	+	113862118-113862167		DA193949 BRAMY3 Homo sapiens cDNA clone BRAMY3018101 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002069.4	ILMN_20694	GNAI1	NM_002069.4	NM_002069.4		2770	33946323	NM_002069.4	GNAI1	NP_002060.4	ILMN_1742044	0001070603	S	2783	TGATGTGTCATCTCTGACCTTGTTTCAGCAAAGTAAACAGCACTCCCCAC	7	+	79686126-79686175	7q21.11b	Homo sapiens guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 (GNAI1), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [pmid 3110783] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3139448] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 2834384] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15537540] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	Gi	Gi
Homo sapiens	RefSeq	NM_002069.4	ILMN_20694	GNAI1	NM_002069.4	NM_002069.4		2770	33946323	NM_002069.4	GNAI1	NP_002060.4	ILMN_2131467	0004260528	S	3115	ACTGGTGGACCTGTAATATCCACATTGTGAAGCTGTGTATGAAATTCAAC	7	+	79686458-79686507	7q21.11b	Homo sapiens guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 (GNAI1), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [pmid 3110783] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3139448] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 2834384] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15537540] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	Gi	Gi
Homo sapiens	RefSeq	NM_024082.2	ILMN_5299	PRRG3	NM_024082.2	NM_024082.2		79057	31543810	NM_024082.2	PRRG3	NP_076987.2	ILMN_1652938	0000730630	S	1470	CTGTGTCTAGAGCTCTGGGCCTCAGGGGTAAGGGAAGGAAGCCAGCCTTT	X	+	150620545-150620594	Xq28d	Homo sapiens proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane) (PRRG3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11171957] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC156177; TMG3; MGC149510; PRGP3	MGC156177; TMG3; MGC149510; PRGP3
Homo sapiens	RefSeq	NM_145063.2	ILMN_24761	C6ORF130	NM_145063.2	NM_145063.2		221443	34147711	NM_145063.2	C6orf130	NP_659500.1	ILMN_1804834	0000780187	S	901	CCTTTTTCTCCAGTATGCTACCTGATTTGTTTGGCTGGCCACTAGGTGGC	6	-	41142732-41142781	6p21.1h	Homo sapiens chromosome 6 open reading frame 130 (C6orf130), mRNA.				MGC19570; dJ34B21.3	MGC19570; dJ34B21.3
Homo sapiens	RefSeq	NM_001031853.2	ILMN_179563	INSC	NM_001042536.1	NM_001042536.1		387755	110227583	NM_001042536.1	INSC	NP_001036001.1	ILMN_1756070	0005910288	S	1531	AGATCCCCATCAGAGAGGAACAGCAGTGACGCCGTGCTTGTGGCCTGCCT	11	+	15199633-15199682	11p15.2a	Homo sapiens inscuteable homolog (Drosophila) (INSC), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_001042536.1	ILMN_179563	INSC	NM_001042536.1	NM_001042536.1		387755	110227583	NM_001042536.1	INSC	NP_001036001.1	ILMN_2340643	0006650373	A	1673	TCTTACTCTGCAGCAACATGGAGGAGAGTTTTGTGTAGTGAGTGTGGGCG	11	+	15199874-15199923	11p15.2a	Homo sapiens inscuteable homolog (Drosophila) (INSC), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XR_015270.2	ILMN_175001	LOC728484	XR_015270.2	XR_015270.2		728484	169194800	XR_015270.2	LOC728484		ILMN_3225121	0006020754	A	348	GAAGTTCTAAGACATTGATGTGGCCAAGGTCAACACCGTGATTTGGCCTG				10q11.23b	PREDICTED: Homo sapiens misc_RNA (LOC728484), miscRNA.					
Homo sapiens	Unigene	Hs.538103	ILMN_103702	HS.538103	Hs.538103		Hs.538103		13625155	AF251047			ILMN_1826215	0003710008	S	723	CTTACGCAATGTGCAAGTGGAAAATGGATGGCAGAAGGATTGTTCTTCCT	1	-	48500664-48500713		Homo sapiens connexin mRNA, complete cds					
Homo sapiens	RefSeq	NM_015288.4	ILMN_18343	PHF15	NM_015288.4	NM_015288.4		23338	40556369	NM_015288.4	PHF15	NP_056103.4	ILMN_1795285	0000770411	S	6247	ACGAGCAATAGAATGTATGGTCACCTGGGTGTGGCCAGTGCCCGCTGTGC	5	+	133918370-133918419	5q31.1e	Homo sapiens PHD finger protein 15 (PHF15), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	JADE2; KIAA0239	JADE2; KIAA0239
Homo sapiens	RefSeq	XM_940244.1	ILMN_35139	LOC651115	XM_940244.1	XM_940244.1		651115	88979662	XM_940244.1	LOC651115	XP_945337.1	ILMN_1745490	0002360224	S	204	CAAGGCCCAGCCAGAATTTGAGCACAGCATGGGCAGGCAGACAGCGTTGG					PREDICTED: Homo sapiens similar to T-box 1 isoform C (LOC651115), mRNA.					
Homo sapiens	RefSeq	NM_152989.2	ILMN_162552	SOX5	NM_152989.2	NM_152989.2		6660	30061560	NM_152989.2	SOX5	NP_694534.1	ILMN_2343677	0001050091	A	3649	CCCACATCTGGGGATGAAATCCCACATCCTCCCAAGTGACTGGTCTAGAA	12	-	23687341-23687390	12p12.1c-p12.1b	Homo sapiens SRY (sex determining region Y)-box 5 (SOX5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8812465] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8812465] [evidence TAS]	MGC35153; L-SOX5	MGC35153; L-SOX5
Homo sapiens	RefSeq	NM_152989.2	ILMN_162552	SOX5	NM_152989.2	NM_152989.2		6660	30061560	NM_152989.2	SOX5	NP_694534.1	ILMN_1760051	0004070671	A	4188	GGCTGCACCCAGGGATCCTTGCCACTGCTCTTCCCTTGCTGTCAGATTAA	12	-	23686802-23686851	12p12.1c-p12.1b	Homo sapiens SRY (sex determining region Y)-box 5 (SOX5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8812465] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8812465] [evidence TAS]	MGC35153; L-SOX5	MGC35153; L-SOX5
Homo sapiens	RefSeq	NM_152321.1	ILMN_26083	ERP27	NM_152321.1	NM_152321.1		121506	22748702	NM_152321.1	ERP27	NP_689534.1	ILMN_1655261	0000940639	S	1387	GTCTTTTTGCCAGAAGTTAAAGGCTGTCTCCAAGTCCCTGAACTCAGCAG	12	-	14958334-14958383	12p12.3e	Homo sapiens endoplasmic reticulum protein 27 kDa (ERP27), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]			ERp27; FLJ32115; C12orf46	ERp27; FLJ32115; C12orf46
Homo sapiens	RefSeq	NM_021138.3	ILMN_15779	TRAF2	NM_021138.3	NM_021138.3		7186	42544228	NM_021138.3	TRAF2	NP_066961.2	ILMN_1691487	0002470465	S	1929	GGAGCACAGTGGATGGCCTTGTGTCCCTCGGGCATGACAGGCAGAAACGA	9	+	138940540-138940589	9q34.3e	Homo sapiens TNF receptor-associated factor 2 (TRAF2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7758105] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12887920] [evidence EXP]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of T cell cytokine production [goid 2726] [pmid 15125833] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 8702708] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8702708] [evidence TAS]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 15125833] [evidence IMP]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; Any process that activates or increases the frequency, rate, or extent of interleukin-2 production [goid 32743] [pmid 15125833] [evidence IMP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 15125833] [evidence IC ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8702708] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11466612] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11777919] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRAP3; TRAP; MGC:45012	TRAP3; TRAP; MGC:45012
Homo sapiens	RefSeq	XM_928997.1	ILMN_46271	LOC646036	XM_928997.1	XM_928997.1		646036	89037946	XM_928997.1	LOC646036	XP_934090.1	ILMN_1764153	0006770280	S	112	GGTCCTGGCTCAGGCTCTGTGAACAGAATTGCCAAACCCAGCCCTGGAAT	15	+	18319176-18319225		PREDICTED: Homo sapiens similar to ankyrin repeat domain 30A (LOC646036), mRNA.					
Homo sapiens	RefSeq	NM_173357.2	ILMN_177655	SSX6	NM_173357.2	NM_173357.2		280657	28559018	NM_173357.2	SSX6	NP_775493.1	ILMN_2092943	0000510021	S	80	TAGGCGGGAAAATCAGAGTCTCCGTCAGAGTGCTCCTGGTGCCATGAACG	X	+	47852111-47852133:47854288-47854307:47854308-47854314	Xp11.23e	Homo sapiens synovial sarcoma, X breakpoint 6 (SSX6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	dJ54B20.1	dJ54B20.1
Homo sapiens	RefSeq	XR_039184.1	ILMN_341668	LOC644237	XR_039184.1	XR_039184.1		644237	169160898	XR_039184.1	LOC644237		ILMN_3283772	0007550592	M	1022	ATAGCCTCCAAGGAGTAAGACCTCTGGGCCACCAGCCCCGCGAGAGCATG				1p12a	PREDICTED: Homo sapiens misc_RNA (LOC644237), miscRNA.					
Homo sapiens	RefSeq	NM_138357.1	ILMN_2979	CCDC109A	NM_138357.1	NM_138357.1		90550	24308399	NM_138357.1	CCDC109A	NP_612366.1	ILMN_1672759	0004050382	S	2652	CTTCTCCCTCCACCACCCCCAGTCGTCAGCTCCTTCCCTCATTTATTTTT	10	+	74317161-74317210	10q22.1f-q22.1g	Homo sapiens coiled-coil domain containing 109A (CCDC109A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ46135; C10orf42	FLJ46135; C10orf42
Homo sapiens	RefSeq	NM_000947.2	ILMN_27188	PRIM2	NM_000947.2	NM_000947.2		5558	41349494	NM_000947.2	PRIM2	NP_000938.2	ILMN_1694100	0005700279	I	1924	CGTCCCAGAGTGCTGGGATTACGGTTGTGAGCCACTGTGCCTGGCCTTTT	6	+	57467116-57467165	6p11.2a	Homo sapiens primase, DNA, polypeptide 2 (58kDa) (PRIM2), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 6693436] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of a short RNA polymer, usually 4-15 nucleotides long, using one strand of unwound DNA as a template; the RNA then serves as a primer from which DNA polymerases extend synthesis [goid 6269] [pmid 8026492] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. Catalyzed by a DNA-directed RNA polymerase that forms a complex with alpha DNA polymerase [goid 3896] [pmid 8026492] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	PRIM2A; MGC75142; PRIM2; p58	PRIM2A; MGC75142; PRIM2; p58
Homo sapiens	RefSeq	NM_207349.1	ILMN_10135	PRR17	NM_207349.1	NM_207349.1		284739	46409331	NM_207349.1	PRR17	NP_997232.1	ILMN_1674924	0001450717	S	1397	AGAAAGAAGTAACCTCCCAAGCTGACCCTGACCCAGCCCCACACTCTGTG	20	+	62141506-62141555	20q13.33e	Homo sapiens proline rich 17 (PRR17), mRNA.				FLJ27267; DKFZp434G015	FLJ27267; DKFZp434G015
Homo sapiens	RefSeq	XM_938013.1	ILMN_163624	LOC728554	XR_015669.1	XR_015669.1		728554	113416833	XR_015669.1	LOC728554		ILMN_1688903	0006350301	S	156	AAGCAGACGCGGGCACGCGCTGCATACCGGGATTTGTAGTCCCTTCCGGG	5	+	177235023-177235072	5q35.3b	PREDICTED: Homo sapiens similar to THO complex 3 (LOC728554), mRNA.					
Homo sapiens	RefSeq	NM_032361.1	ILMN_163624	LOC728554	XR_015669.1	XR_015669.1		728554	113416833	XR_015669.1	LOC728554		ILMN_1813246	0000670192	I	738	TGCCACTGTGAACACTAAAGGGGAGAACATTAATATCTGCTGGAGTCCTG	5	+	177236276-177236295:177238251-177238280	5q35.3b	PREDICTED: Homo sapiens similar to THO complex 3 (LOC728554), mRNA.					TEX1; MGC5469
Homo sapiens	RefSeq	XM_942099.1	ILMN_163624	LOC728554	XR_015669.1	XR_015669.1		728554	113416833	XR_015669.1	LOC728554		ILMN_1691949	0001430093	A	1638	CCTCTGGACCTCCTGTCTTCTCTGCTTCTGGGTGCATGGTAGACTTTGTG	5	+	177243686-177243735	5q35.3b	PREDICTED: Homo sapiens similar to THO complex 3 (LOC728554), mRNA.					
Homo sapiens	RefSeq	XM_001130700.1	ILMN_180472	LOC729580	XM_001130700.1	XM_001130700.1		729580	113428859	XM_001130700.1	LOC729580	XP_001130700.1	ILMN_3300198	0000020450	M	897	TGCTCTCCATCCTGGATCGTAAGGAGGCATCATCAGGCTGTGTTCCTGGA	20	-	33328401-33328429:33328430-33328450	20q11.22b	PREDICTED: Homo sapiens hypothetical LOC729580 (LOC729580), mRNA.					
Homo sapiens	RefSeq	XM_940256.1	ILMN_36227	LOC651126	XM_940256.1	XM_940256.1		651126	88981334	XM_940256.1	LOC651126	XP_945349.1	ILMN_1803191	0000290291	S	239	GAAACTTGGCAAGAAACACTGCCTCTGAATCCAGCCTCCCTGCCGCAGCC					PREDICTED: Homo sapiens similar to Claudin-22 (LOC651126), mRNA.					
Homo sapiens	RefSeq	NM_152343.1	ILMN_6279	C17ORF46	NM_152343.2	NM_152343.2		124783	149408116	NM_152343.2	C17orf46	NP_689556.2	ILMN_1670707	0000520746	S	1065	CTTCAGCAAGCCGGGGATCAAGAGGGCCACCATCAAAGGGCAAATCCAGC	17	-	43332530-43332579	17q21.31d	Homo sapiens chromosome 17 open reading frame 46 (C17orf46), mRNA.				FLJ25414	FLJ25414
Homo sapiens	RefSeq	NM_032136.3	ILMN_28296	TKTL2	NM_032136.4	NM_032136.4		84076	133778973	NM_032136.4	TKTL2	NP_115512.3	ILMN_1713533	0004490424	S	2506	ACAGATAATGTTTGACTGCAGTTGCCTTGGAAATTCCTCCAAAGTTTGCC	4	-	164611942-164611991	4q32.3a	Homo sapiens transketolase-like 2 (TKTL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ32975; DKFZP434L1717	FLJ32975; DKFZP434L1717
Homo sapiens	RefSeq	NM_014044.4	ILMN_19045	UNC50	NM_014044.4	NM_014044.4		25972	37059764	NM_014044.4	UNC50	NP_054763.2	ILMN_1766981	0005390561	S	1858	GTATCCATTTGCACCTCTGATTCTGCTCTACGGGCTTTCCCTGGCACTGG	2	+	98601096-98601145	2q11.2c	Homo sapiens unc-50 homolog (C. elegans) (UNC50), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	URP; GMH1; DKFZp564G0222; HSD23; hGMH1p; UNCL	URP; GMH1; DKFZp564G0222; HSD23; hGMH1p; UNCL
Homo sapiens	RefSeq	XM_001717395.1	ILMN_348227	LOC100129630	XM_001717395.1	XM_001717395.1		100129630	169167608	XM_001717395.1	LOC100129630	XP_001717447.1	ILMN_3191898	0006100025	A	193	AAAATAAAGCCAGACTCCCGGAGCCCCACTCCAGTACCTCCGAGCTTCGC	5	-	42459801-42459850	5p12c	PREDICTED: Homo sapiens hypothetical LOC100129630 (LOC100129630), mRNA.					
Homo sapiens	RefSeq	NM_177996.1	ILMN_22376	EPB41L1	NM_177996.1	NM_177996.1		2036	30061490	NM_177996.1	EPB41L1	NP_818932.1	ILMN_1684534	0006560255	I	3	GCCTGACTGACAGAAGTTCTTGCCCCCGGGGAGCTGGTGTGGACAGAGGA	20	+	34163764-34163813	20q11.23a	Homo sapiens erythrocyte membrane protein band 4.1-like 1 (EPB41L1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	KIAA0338; 4.1N; DKFZp686H17242; MGC11072	KIAA0338; 4.1N; DKFZp686H17242; MGC11072
Homo sapiens	RefSeq	NM_004873.2	ILMN_28111	BAG5	NM_004873.2	NM_004873.2		9529	62548852	NM_004873.2	BAG5	NP_004864.1	ILMN_2361695	0000130669	A	4013	CAGGCATGGCTTTGTTTCTGGTTTCAATCTGTTCTCGTTCCTTGTACCGG	14	-	104023673-104023722	14q32.33a	Homo sapiens BCL2-associated athanogene 5 (BAG5), transcript variant 2, mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9873016] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BAG-5	BAG-5
Homo sapiens	RefSeq	XM_001713803.1	ILMN_346606	LOC100132596	XM_001713803.1	XM_001713803.1		100132596	169217411	XM_001713803.1	LOC100132596	XP_001713855.1	ILMN_3244880	0005550730	S	186	TACAGAACTGTGGGGTATATGAAAGAGATGCAACAACTGTACCAGATAGC	Y	+	2702860-2702909	Yp11.31b	PREDICTED: Homo sapiens hypothetical protein LOC100132596 (LOC100132596), mRNA.					
Homo sapiens	RefSeq	NM_005097.1	ILMN_9889	LGI1	NM_005097.1	NM_005097.1		9211	4826815	NM_005097.1	LGI1	NP_005088.1	ILMN_1788728	0004850524	S	1601	ATGGGGAGGCTCCTCGTTCCAGGATATTCAGAGGATGCCATCGCGAGGAT	10	+	95547253-95547302	10q23.33b	Homo sapiens leucine-rich, glioma inactivated 1 (LGI1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9879993] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9879993] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EPT; IB1099; ETL1	ETL1; EPT; IB1099
Homo sapiens	RefSeq	NM_005097.1	ILMN_9889	LGI1	NM_005097.1	NM_005097.1		9211	4826815	NM_005097.1	LGI1	NP_005088.1	ILMN_2171023	0004150068	S	2012	GAGACTGCTAGAACCAAGCACTACCAGTATCTCCATCCTTAACTGTCCAG	10	+	95547664-95547713	10q23.33b	Homo sapiens leucine-rich, glioma inactivated 1 (LGI1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9879993] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9879993] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EPT; IB1099; ETL1	ETL1; EPT; IB1099
Homo sapiens	RefSeq	NM_001001936.1	ILMN_169116	AFAP1L2	NM_001001936.1	NM_001001936.1		84632	50897849	NM_001001936.1	AFAP1L2	NP_001001936.1	ILMN_1730995	0004590133	A	3699	GTGATCGCCCTCTTAAAATTGGCAGTGCTGTTCCTTGTGCTGCCCCTGTC	10	-	116057592-116057641	10q25.3a	Homo sapiens actin filament associated protein 1-like 2 (AFAP1L2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17412687] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 17412687] [evidence IDA]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [pmid 17412687] [evidence IDA]; Any process that modulates the frequency, rate, or extent of interleukin-6 production [goid 32675] [pmid 17412687] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-8 production [goid 32757] [pmid 17412687] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity [goid 45742] [pmid 17412687] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 17412687] [evidence IDA]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 17412687] [evidence IPI]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [pmid 17412687] [evidence IDA]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 17412687] [evidence IPI]	FLJ14564; XB130; KIAA1914	FLJ14564; XB130
Homo sapiens	RefSeq	NM_023019.1	ILMN_1271	DCTN1	NM_023019.1	NM_023019.1		1639	13259507	NM_023019.1	DCTN1	NP_075408.1	ILMN_2412807	0002350315	A	3708	CCACCAAAGGTTAAGTGAGGTCCCCTTGATTGAGGACTTCACCCCTTGAT	2	-	74441811-74441860	2p13.1b	Homo sapiens dynactin 1 (p150, glued homolog, Drosophila) (DCTN1), transcript variant 2, mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [pmid 14718566] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1828535] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 1828535] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 17360970] [evidence NAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15107855] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9722614] [evidence IPI]	P135; DAP-150; HMN7B; DP-150	P135; DAP-150; HMN7B; DP-150
Homo sapiens	RefSeq	NM_152699.4	ILMN_24031	SENP5	NM_152699.4	NM_152699.4		205564	159032028	NM_152699.4	SENP5	NP_689912.2	ILMN_3251634	0002680703	S	5936	GCCATAACGGGGTTCTGGGCAGGTCAGACTCTTCAGCAAGACAGTGTATT	3	+	196661213-196661262	3q29g	Homo sapiens SUMO1/sentrin specific peptidase 5 (SENP5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	MGC27076; DKFZp564O1016; FLJ42398	MGC27076; FLJ42398
Homo sapiens	RefSeq	NM_025169.1	ILMN_26432	ZNF167	NM_018651.2	NM_018651.2		55888	47716686	NM_018651.2	ZNF167	NP_061121.2	ILMN_1730696	0005900577	A	1178	CCTGCAGTGGAACATGATGCCAGAAAATCACCATAGCATGGCCTCCTTGG	3	+	44584880-44584929	3p21.32b	Homo sapiens zinc finger protein 167 (ZNF167), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12738; ZNF64; ZFP; ZNF448; ZKSCAN7	FLJ12738; ZFP; ZKSCAN7; ZNF64; ZNF448
Homo sapiens	RefSeq	NM_018651.2	ILMN_26432	ZNF167	NM_018651.2	NM_018651.2		55888	47716686	NM_018651.2	ZNF167	NP_061121.2	ILMN_1761409	0002480564	I	3050	GTCATTCAAAAAGGCTGATTCATGCCTTCCTGCCTCTTGGCTATGGCCCT	3	+	44588240-44588289	3p21.32b	Homo sapiens zinc finger protein 167 (ZNF167), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12738; ZNF64; ZFP; ZNF448; ZKSCAN7	FLJ12738; ZFP; ZKSCAN7; ZNF64; ZNF448
Homo sapiens	RefSeq	NM_003776.2	ILMN_21771	MRPL40	NM_003776.2	NM_003776.2		64976	26638658	NM_003776.2	MRPL40	NP_003767.2	ILMN_1687403	0005090414	S	458	TGCTAGAAGCCCAGCAGGAAGCTCTGGAGGAACTGCAACTGGAATCCCCG	22	+	17803280-17803329	22q11.21c	Homo sapiens mitochondrial ribosomal protein L40 (MRPL40), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9790763] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9790763] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NLVCF; URIM; MGC9400; FLJ41774; MRP-L22	NLVCF; URIM; MGC9400; FLJ41774; MRP-L22
Homo sapiens	RefSeq	NM_001077182.1	ILMN_175393	FSCN2	NM_001077182.1	NM_001077182.1		25794	116295250	NM_001077182.1	FSCN2	NP_001070650.1	ILMN_2364901	0000050097	A	1191	GCGCTACGTGTGCATGAAGAAGAATGGGCAGCTGGCGGCTATCAGCGATT	17	+	77113717-77113766	17q25.3f	Homo sapiens fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) (FSCN2), transcript variant 2, mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10783262] [evidence TAS]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10783262] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10783262] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [pmid 10783262] [evidence TAS]	Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IEA]	RFSN; RP30	RFSN; RP30
Homo sapiens	RefSeq	NM_001009905.1	ILMN_7324	B3GNTL1	NM_001009905.1	NM_001009905.1		146712	57770467	NM_001009905.1	B3GNTL1	NP_001009905.1	ILMN_1702817	0001570086	S	1138	AGCAGGAGCTTTGTGAGCTGCAGGCATGGCGATGGTGCGCCTGTTCCACA	17	-	80901862-80901911	17q25.3h	Homo sapiens UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 (B3GNTL1), mRNA.			Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC126253; MGC126256; B3GNT8	MGC126253; MGC126256; B3GNT8
Homo sapiens	RefSeq	NM_022119.3	ILMN_21409	PRSS22	NM_022119.3	NM_022119.3		64063	63079716	NM_022119.3	PRSS22	NP_071402.1	ILMN_1776925	0000510546	S	1113	TAAATAGGCTCATCTACCTCTACCTCTGGGGGCCCGGACGGCTGCTGCGG	16	-	2902951-2903000	16p13.3d	Homo sapiens protease, serine, 22 (PRSS22), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	hBSSP-4; MGC9599; BSSP-4; SP001LA	hBSSP-4; MGC9599; BSSP-4; SP001LA
Homo sapiens	RefSeq	XM_926100.1	ILMN_44072	LOC642629	XM_926100.1	XM_926100.1		642629	89029274	XM_926100.1	LOC642629	XP_931193.1	ILMN_1700394	0006100142	S	2535	GCCACCAATGGCAAGTCTGAGAAAGCAGGTGTTGACCAAAGCATCTGATC	9	-	41312665-41312714	9p12a	PREDICTED: Homo sapiens similar to chromosome 9 open reading frame 36 (LOC642629), mRNA.					
Homo sapiens	RefSeq	NM_001781.1	ILMN_167129	CD69	NM_001781.1	NM_001781.1		969	4502680	NM_001781.1	CD69	NP_001772.1	ILMN_2188333	0002710575	S	1301	TCCTCAGCTGTAGACAGGTCCTTTTCGATGGTACATATTTCTTTGCCTTT	12	-	9796674-9796723	12p13.31a	Homo sapiens CD69 molecule (CD69), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8340758] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 8340758] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLEC2C	CLEC2C
Homo sapiens	Unigene	Hs.132585	ILMN_77371	HS.132585	Hs.132585		Hs.132585		5113487	AI745199			ILMN_1863858	0007000112	S	412	GGAGTCCTGGTCTTGGAGGCAGGGGTGGAGAGGCAGGGCTTGTTAAGAAA	4	+	14828071-14828120		wg10b09.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:2364665 3, mRNA sequence					
Homo sapiens	RefSeq	NM_032741.3	ILMN_26020	AGPAT1	NM_032741.3	NM_032741.3		10554	26787963	NM_032741.3	AGPAT1	NP_116130.2	ILMN_1779109	0000630437	I	1	GGACTTTGGAGCGTATGGCTCCAAATCAACTCATTGGCTAAAACTTGACG	6	-	32253770-32253819	6p21.32b	Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) (AGPAT1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9461603] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9461603] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids [goid 6654] [pmid 9461603] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [pmid 9461603] [evidence NAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol [goid 46027] [pmid 9461603] [evidence EXP]	MGC5423; MGC4007; LPAAT-alpha; 1-AGPAT1; G15; LPAATA	MGC5423; MGC4007; LPAAT-alpha; 1-AGPAT1; G15; LPAATA
Homo sapiens	RefSeq	NM_003385.4	ILMN_14653	VSNL1	NM_003385.4	NM_003385.4		7447	63252921	NM_003385.4	VSNL1	NP_003376.2	ILMN_1676413	0006100259	S	1409	GAGGGACCCTTGGCTCCTGTGTCTGGTCCACACACCACAGAAGCTTGTAT	2	+	17700591-17700640	2p24.2b	Homo sapiens visinin-like 1 (VSNL1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	HPCAL3; VILIP-1; HUVISL1; HLP3; VILIP	HPCAL3; VILIP-1; HUVISL1; HLP3; VILIP
Homo sapiens	RefSeq	XM_927237.1	ILMN_33548	LOC653219	XM_927237.1	XM_927237.1		653219	89059694	XM_927237.1	LOC653219	XP_932330.1	ILMN_1782501	0004390386	A	392	GACACACACAAACACAGAACCACACAGCCAGTCCCAGGAGCCCAGTAATG	X	+	52256096-52256096:52257183-52257231		PREDICTED: Homo sapiens similar to G antigen, family D, 2 isoform 1a, transcript variant 1 (LOC653219), mRNA.					
Homo sapiens	RefSeq	NM_173644.1	ILMN_1118	C20ORF197	NM_173644.1	NM_173644.1		284756	27735086	NM_173644.1	C20orf197	NP_775915.1	ILMN_1691228	0001340176	S	1943	TGGGCTGGCTTCCAGTTTTATGTTTCCCAAATGGTGATTCAGCTGTTCCA	20	+	58080614-58080663	20q13.33a	Homo sapiens chromosome 20 open reading frame 197 (C20orf197), mRNA.				FLJ33860; MGC120496; RP5-1017F8.1	FLJ33860; MGC120496; RP5-1017F8.1
Homo sapiens	RefSeq	NM_005993.3	ILMN_171092	TBCD	NM_005993.4	NM_005993.4		6904	118572583	NM_005993.4	TBCD	NP_005984.3	ILMN_1673376	0004010377	A	4165	ATGCTAGAGAACTGAGAAGCCCTGGTGGCAGGCATGGTCTGGAGTGCTGG	17	+	78494084-78494133	17q25.3h	Homo sapiens tubulin folding cofactor D (TBCD), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 8706133] [evidence TAS]	Folding of the microtubule constituent protein beta-tubulin [goid 7025] [pmid 8706133] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 8706133] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0988	KIAA0988
Homo sapiens	RefSeq	NM_005993.3	ILMN_171092	TBCD	NM_005993.4	NM_005993.4		6904	118572583	NM_005993.4	TBCD	NP_005984.3	ILMN_1795400	0005090543	I	3533	ACATTGCTCACCTACAGTGACGTCGTGGGCGCGGATGTGCTGGACGAGGT	17	+	78490565-78490614	17q25.3h	Homo sapiens tubulin folding cofactor D (TBCD), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 8706133] [evidence TAS]	Folding of the microtubule constituent protein beta-tubulin [goid 7025] [pmid 8706133] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 8706133] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0988	KIAA0988
Homo sapiens	RefSeq	NM_001011720.1	ILMN_13157	XKR9	NM_001011720.1	NM_001011720.1		389668	58743324	NM_001011720.1	XKR9	NP_001011720.1	ILMN_1733846	0000240433	S	2559	CCTTGTTGCCATGGTTTGAATGTGCCCCCCAGATTTCATGTGTGTGAAAC	8	+	71647562-71647611	8q13.3b	Homo sapiens XK, Kell blood group complex subunit-related family, member 9 (XKR9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			XRG9	XRG9
Homo sapiens	RefSeq	NM_199346.1	ILMN_28317	PFN4	NM_199346.1	NM_199346.1		375189	40786417	NM_199346.1	PFN4	NP_955378.1	ILMN_1792383	0001990440	S	480	GCAACTTACACTGAGGGCATGTATCCTAGCATCTGTGTGGAAGCCACAGA	2	-	24342454-24342503	2p23.3d	Homo sapiens profilin family, member 4 (PFN4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Homo sapiens	RefSeq	NM_017572.2	ILMN_22850	MKNK2	NM_017572.2	NM_017572.2		2872	40018630	NM_017572.2	MKNK2	NP_060042.2	ILMN_2347068	0000940152	A	1453	GGTCAGAACCGTTACTGTGAATGAGTGAAGATCCTGGAGGACCCTGGGCC	19	-	1988715-1988737:1988738-1988764	19p13.3h	Homo sapiens MAP kinase interacting serine/threonine kinase 2 (MKNK2), transcript variant 1, mRNA.		Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 11463832] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8415712] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 11463832] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11463832] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11463832] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GPRK7; MNK2	GPRK7; MNK2
Homo sapiens	RefSeq	NM_006462.3	ILMN_19452	RBCK1	NM_006462.3	NM_006462.3		10616	110224483	NM_006462.3	RBCK1	NP_006453.1	ILMN_2406313	0005820753	A	2323	CCCACCACAACACTCATCTGTCAAACACCAAGCACTCTCAGCCTCCCCGC				20p13f	Homo sapiens RanBP-type and C3HC4-type zinc finger containing 1 (RBCK1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 16083853] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16083853] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	XAP4; RNF54; ZRANB4; RBCK2; UBCE7IP3; C20orf18	RBCK1; XAP4; RNF54; UBCE7IP3
Homo sapiens	RefSeq	XR_039789.1	ILMN_347332	LOC100134475	XR_039789.1	XR_039789.1		100134475	169170711	XR_039789.1	LOC100134475		ILMN_3245431	0006840338	S	464	TGACTACTGCTTCAACAAACCAGAAGACAAGTAACTGCGTATGAGTTAAT	7	+	156214790-156214839		PREDICTED: Homo sapiens misc_RNA (LOC100134475), miscRNA.					
Homo sapiens	RefSeq	XM_939804.1	ILMN_44685	LOC645320	XM_939804.2	XM_939804.2		645320	113423700	XM_939804.2	LOC645320	XP_944897.1	ILMN_1700747	0004070092	S	65	AAGAAGGTGAAGGTAGCAGGAACCAAGAGGGTAATCTGGGTGGTCAGGCC				12p11.23a	PREDICTED: Homo sapiens hypothetical LOC645320 (LOC645320), mRNA.					
Homo sapiens	RefSeq	NM_014665.1	ILMN_166093	LRRC14	NM_014665.1	NM_014665.1		9684	7661859	NM_014665.1	LRRC14	NP_055480.1	ILMN_1678998	0002810687	S	5188	AACACAGGTTGGCAGGCCAGTCTCGGCAGTCGAGAGCCAGCCAATAGATG	8	+	145721230-145721279	8q24.3h	Homo sapiens leucine rich repeat containing 14 (LRRC14), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0014	KIAA0014
Homo sapiens	Unigene	Hs.544495	ILMN_107894	HS.544495	Hs.544495		Hs.544495		560898	Z38506			ILMN_1860632	0000620673	S	61	CAACTAGACATCCAAATAACCCCCCAAAATAAATAGTTTAGAATACTAGT	6	+	101951585-101951634		HSC0DH082 normalized infant brain cDNA Homo sapiens cDNA clone c-0dh08 3, mRNA sequence					
Homo sapiens	RefSeq	NM_031435.1	ILMN_28079	THAP2	NM_031435.1	NM_031435.1		83591	13899258	NM_031435.1	THAP2	NP_113623.1	ILMN_2115553	0006270328	S	4283	TCGGGCATTTACTGTGTGCCAACTTGCAAAAGGAATAGAAATGTCTGTGA	12	+	70360245-70360294	12q21.1a	Homo sapiens THAP domain containing, apoptosis associated protein 2 (THAP2), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11256614] [evidence IDA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP564I0422	DKFZP564I0422
Homo sapiens	RefSeq	XM_932802.1	ILMN_41660	LOC645307	XM_932802.2	XM_932802.2		645307	113426138	XM_932802.2	LOC645307	XP_937895.1	ILMN_1776523	0001510397	S	3200	TTTGTAGAGATAGGCTCACTATGTTGCCTAGGCTGGGCCTGAACTCCTGG	16	-	68704712-68704761	16q22.1f	PREDICTED: Homo sapiens hypothetical LOC645307 (LOC645307), mRNA.					
Homo sapiens	RefSeq	XM_932802.2	ILMN_41660	LOC645307	XM_932802.2	XM_932802.2		645307	113426138	XM_932802.2	LOC645307	XP_937895.1	ILMN_3251327	0004610328	S	3757	CAGGCACATGAATTTGGGAGAAACCTGGTTGTCTGCAGGAGATGGTGGAT	16	-	68704155-68704204	16q22.1f	PREDICTED: Homo sapiens hypothetical LOC645307 (LOC645307), mRNA.					
Homo sapiens	RefSeq	XM_001714396.1	ILMN_341415	LOC100132984	XM_001714396.1	XM_001714396.1		100132984	169217070	XM_001714396.1	LOC100132984	XP_001714448.1	ILMN_3283434	0006040685	M	495	GGAAACTGGAACACAGACTCCTCCAGCAGCTCCACAGGTCCCTTGTCCTC				Xp11.22a	PREDICTED: Homo sapiens hypothetical protein LOC100132984 (LOC100132984), mRNA.					
Homo sapiens	RefSeq	NM_000522.2	ILMN_457	HOXA13	NM_000522.3	NM_000522.3		3209	84452162	NM_000522.3	HOXA13	NP_000513.2	ILMN_1731349	0003450189	S	1823	CCAACCAGCTGAACCTTTCAGGCTACAAGAGAACCCGGGTCGGTAATGTC				7p15.2a	Homo sapiens homeobox A13 (HOXA13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9020844] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX1J; HOX1	HOX1J; HOX1
Homo sapiens	RefSeq	NM_001080490.1	ILMN_181109	PLA2G4E	NM_001080490.1	NM_001080490.1		123745	122937427	NM_001080490.1	PLA2G4E	NP_001073959.1	ILMN_2370862	0005050224	A	2195	ATCTCAAGGAATGCTACCTGATGGAGAACCCCCAGGAACCCGATGCCCCC	15	-	42276688-42276737	15q15.1d	Homo sapiens phospholipase A2, group IVE (PLA2G4E), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ45651; MGC126661; MGC126633	FLJ45651; MGC126661; MGC126633
Homo sapiens	RefSeq	NM_021976.3	ILMN_162235	RXRB	NM_021976.3	NM_021976.3		6257	27436942	NM_021976.3	RXRB	NP_068811.1	ILMN_1774074	0006380431	S	2774	TGCTGGGGCTGCATGATTTTTGCCCTGCGTCCCTTCTCTTTGGGGCTCCT	6	-	33269394-33269443	6p21.32a	Homo sapiens retinoid X receptor, beta (RXRB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7990953] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1662118] [evidence NAS];  [goid 3706] [pmid 7990953] [evidence IDA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 1662118] [evidence TAS];  [goid 4886] [pmid 1662118] [evidence TAS]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	H-2RIIBP; NR2B2; MGC1831; RCoR-1; DAUDI6	H-2RIIBP; NR2B2; MGC1831; RCoR-1; DAUDI6
Homo sapiens	RefSeq	XM_372532.3	ILMN_177390	SERPINA2	XM_372532.3	XM_372532.3		390502	89037491	XM_372532.3	SERPINA2	XP_372532.3	ILMN_1810166	0005810711	S	773	GCCTGGTGACTTCAGGCAGCTGGCAATTACTGGGCATCTACCAAGGGACA	14	-	93902788-93902792:93906666-93906710	14q32.13a	PREDICTED: Homo sapiens serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2 (SERPINA2), mRNA.			Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 2842251] [evidence TAS]		
Homo sapiens	RefSeq	NM_030786.1	ILMN_25683	SYNC1	NM_030786.1	NM_030786.1		81493	13540560	NM_030786.1	SYNC1	NP_110413.1	ILMN_1771261	0005220452	S	1728	TGGACAACAACTGTCATCTGAAGGACTCTTCTAGAAGCCAGAGACTGGTG	1	-	32918884-32918933	1p35.1b	Homo sapiens syncoilin, intermediate filament 1 (SYNC1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins [goid 45103] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SYNC; MGC149626; SYNCOILIN; MGC149625	SYNC; MGC149626; SYNCOILIN; MGC149625
Homo sapiens	RefSeq	NM_033108.2	ILMN_13858	HSFY2	NM_153716.1	NM_153716.1		159119	32526912	NM_153716.1	HSFY2	NP_714927.1	ILMN_1672935	0001070128	I	694	AGAAGAATTGGTGTTAAAAATGCTTCACCTATATCTACTTTATTCAACGA	Y	-	20934400-20934449	Yq11.222a	Homo sapiens heat shock transcription factor, Y linked 2 (HSFY2), transcript variant 1, mRNA.				HSF2L; HSFY; FLJ25453	HSF2L; HSFY
Homo sapiens	RefSeq	NM_033108.2	ILMN_13858	HSFY2	NM_153716.1	NM_153716.1		159119	32526912	NM_153716.1	HSFY2	NP_714927.1	ILMN_1688833	0004880564	A	201	GTGTGAACACACCTTCCCTGGGGACTCAGACTTACGGTCAATGATTGAAG	Y	-	20935371-20935420	Yq11.222a	Homo sapiens heat shock transcription factor, Y linked 2 (HSFY2), transcript variant 1, mRNA.				HSF2L; HSFY; FLJ25453	HSF2L; HSFY
Homo sapiens	RefSeq	NM_153716.1	ILMN_13858	HSFY2	NM_153716.1	NM_153716.1		159119	32526912	NM_153716.1	HSFY2	NP_714927.1	ILMN_2291534	0004120477	I	874	TCTTCTGTCAGACAGATAATTGCAAATTCATCTGTCCCCATTAGAAGTGG	Y	-	20934220-20934269	Yq11.222a	Homo sapiens heat shock transcription factor, Y linked 2 (HSFY2), transcript variant 1, mRNA.				HSF2L; HSFY; FLJ25453	HSF2L; HSFY; FLJ25453
Homo sapiens	RefSeq	NM_153716.1	ILMN_13858	HSFY2	NM_153716.1	NM_153716.1		159119	32526912	NM_153716.1	HSFY2	NP_714927.1	ILMN_2291538	0001300152	I	1114	AATGGTTATTTTGGGCTGACAGTGGAACCATCTGCTGTTCCCACACGATA	Y	-	20933980-20934029	Yq11.222a	Homo sapiens heat shock transcription factor, Y linked 2 (HSFY2), transcript variant 1, mRNA.				HSF2L; HSFY; FLJ25453	HSF2L; HSFY; FLJ25453
Homo sapiens	RefSeq	NM_153716.1	ILMN_13858	HSFY2	NM_153716.1	NM_153716.1		159119	32526912	NM_153716.1	HSFY2	NP_714927.1	ILMN_2401946	0000240273	A	261	TCAGGTTTTGTCACAAGGATCCTTGTTAGAAAGTCCAAGTTACACAGTTT	Y	-	20935311-20935360	Yq11.222a	Homo sapiens heat shock transcription factor, Y linked 2 (HSFY2), transcript variant 1, mRNA.				HSF2L; HSFY; FLJ25453	HSF2L; HSFY; FLJ25453
Homo sapiens	RefSeq	NM_024014.2	ILMN_16941	HOXA6	NM_024014.2	NM_024014.2		3203	24797131	NM_024014.2	HOXA6	NP_076919.1	ILMN_1815570	0000610563	S	752	CCCTTGCCCTCGCCTGTTCCCCAACTTTTCTCCCCGCCTGCTCCCATCTG	7	-	27185177-27185226	7p15.2a	Homo sapiens homeobox A6 (HOXA6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX1B; HOX1.2; HOX1	HOX1B; HOX1.2; HOX1
Homo sapiens	RefSeq	NM_018434.4	ILMN_22886	RNF130	NM_018434.4	NM_018434.4		55819	38176162	NM_018434.4	RNF130	NP_060904.2	ILMN_1729294	0001510722	S	1503	CCTCAGGATGGGGAGCTCACTCCGAGAACAGGAGAAATCAACATTGCAGT	5	-	179431263-179431308:179431309-179431312	5q35.3e	Homo sapiens ring finger protein 130 (RNF130), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	G1RZFP; MGC138647; GOLIATH; MGC99542; MGC117241; GP	G1RZFP; MGC138647; GOLIATH; MGC99542; MGC117241; GP
Homo sapiens	RefSeq	XR_017287.2	ILMN_175849	LOC391132	XR_017287.2	XR_017287.2		391132	169162697	XR_017287.2	LOC391132		ILMN_3205762	0004730279	A	197	GTGCTTTGGGAGCTGGGTGTTACAGTGCAGACAAGGCCAAGTCCAAGAAC	1	+	167174294-167174343	1q24.2b	PREDICTED: Homo sapiens misc_RNA (LOC391132), miscRNA.					
Homo sapiens	RefSeq	XM_938124.1	ILMN_34175	LOC649041	XM_938124.1	XM_938124.1		649041	89025976	XM_938124.1	LOC649041	XP_943217.1	ILMN_1728374	0003170612	S	2786	GACAATATACTATTTGTTAATGTAGGGGAATGACATCACTAGTAGTCTCT					PREDICTED: Homo sapiens similar to Zinc finger protein 479 (Zinc finger protein Kr19) (HKr19) (LOC649041), mRNA.					
Homo sapiens	RefSeq	NM_014659.3	ILMN_24102	HISPPD2A	NM_014659.3	NM_014659.3		9677	66932991	NM_014659.3	HISPPD2A	NP_055474.3	ILMN_2278686	0005340592	I	3410	ATGCCCAGGCACAGGCATCTGCAGCCCTCTTTGATTCCATGCACAGCAGC	15	-	41619047-41619073:41638285-41638307	15q15.3a	Homo sapiens histidine acid phosphatase domain containing 2A (HISPPD2A), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17702752] [evidence IDA]	The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [pmid 17412958] [evidence IDA]	Catalysis of the reaction: ATP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate = ADP + diphospho-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 827] [pmid 17412958] [evidence IDA]; Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate [goid 832] [pmid 17412958] [evidence IDA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol pentakisphosphate = ADP + bis(diphospho)-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 33857] [pmid 17412958] [evidence IDA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	DKFZp313L0221; MGC51871; KIAA0377; VIP1; IPS1; IP6K; PPIP5K1	DKFZp313L0221; MGC51871; KIAA0377; VIP1; IPS1; IP6K; PPIP5K1
Homo sapiens	RefSeq	NM_019100.3	ILMN_28244	DMAP1	NM_001034023.1	NM_001034023.1		55929	78000210	NM_001034023.1	DMAP1	NP_001029195.1	ILMN_1773885	0005490646	S	1382	CGGCAGTGACTGAACCCGGACTTGGTCCTGACCCCAAGGACACCATCATT	1	+	44458486-44458535	1p34.1e	Homo sapiens DNA methyltransferase 1 associated protein 1 (DMAP1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10888872] [evidence NAS]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10888872] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10888872] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15033475] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10888872] [evidence NAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ11543; KIAA1425; DNMTAP1; DKFZp686L09142; SWC4; DNMAP1; EAF2	FLJ11543; KIAA1425; DNMTAP1; DKFZp686L09142; DNMAP1
Homo sapiens	RefSeq	NM_005911.4	ILMN_25630	MAT2A	NM_005911.4	NM_005911.4		4144	46852159	NM_005911.4	MAT2A	NP_005902.1	ILMN_1737298	0007150176	S	2619	TGGTGCGGCTGGCCATGGAGAAAGCTGACTTGGCTGGTGTGGTACAGAGA	2	+	85625714-85625763	2p11.2f	Homo sapiens methionine adenosyltransferase II, alpha (MAT2A), mRNA.		The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism [goid 6556] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine [goid 4478] [pmid 7665609] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]	MATII; SAMS2; MATA2	MATII; SAMS2; MATA2
Homo sapiens	RefSeq	NM_153813.1	ILMN_15190	ZFPM1	NM_153813.2	NM_153813.2		161882	110556643	NM_153813.2	ZFPM1	NP_722520.2	ILMN_1651438	0007320494	S	2948	ACCACCGGTACTGCCGTCTTTGCAACATCAAGTTCAGCAGCCTGTCCACC	16	+	87128782-87128831	16q24.2b	Homo sapiens zinc finger protein, multitype 1 (ZFPM1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FOG1; ZNF408; FOG; ZNF89A	FOG1; ZNF408; FOG
Homo sapiens	Unigene	Hs.541130	ILMN_105560	HS.541130	Hs.541130		Hs.541130		3756268	AI203662			ILMN_1820606	0006450707	S	341	CATTGATGGCTACGCTGGAAGGAAAACCCAGAGGCGGGGAGGTGACGTCT	18	-	12219878-12219919:12219921-12219928		qf48f04.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1753279 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002896.1	ILMN_11057	RBM4	NM_002896.2	NM_002896.2		5936	93277121	NM_002896.2	RBM4	NP_002887.2	ILMN_1709042	0000840544	A	341	TGTGGGCAACATCAGTCCCACCTGCACCAATAAGGAGCTTCGAGCCAAGT	11	+	66164001-66164050	11q13.1e	Homo sapiens RNA binding motif protein 4 (RBM4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors on mast cells or basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines [goid 16068] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9169144] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZCRB3A; ZCCHC21; RBM4A; LARK; MGC75138; DKFZp547K0918	ZCCHC21; RBM4A; LARK; MGC75138; ZCRB3A; DKFZp547K0918
Homo sapiens	RefSeq	XM_945490.1	ILMN_11057	RBM4	NM_002896.2	NM_002896.2		5936	93277121	NM_002896.2	RBM4	NP_002887.2	ILMN_1712455	0000520243	A	458	GGCAGAGGATGCAGTGGAGGCCATCAGGGGCCTTGATAACACAGAGTTTC	11	+	66164118-66164167	11q13.1e	Homo sapiens RNA binding motif protein 4 (RBM4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors on mast cells or basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines [goid 16068] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9169144] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZCRB3A; ZCCHC21; RBM4A; LARK; MGC75138; DKFZp547K0918	
Homo sapiens	RefSeq	NM_006527.2	ILMN_3687	SLBP	NM_006527.2	NM_006527.2		7884	19913344	NM_006527.2	SLBP	NP_006518.1	ILMN_1753353	0003290291	S	982	CTGGCCAGGCACCAAGCATGTGTGTGCACTTGTACCTGGTGGTTTCTCTG	4	-	1695220-1695269	4p16.3b	Homo sapiens stem-loop binding protein (SLBP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9049306] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [pmid 10825184] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in forming the mature 3' end of a histone mRNA molecule [goid 6398] [pmid 9049306] [evidence TAS]	Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 9049306] [evidence TAS]	HBP	HBP
Homo sapiens	RefSeq	NM_006527.2	ILMN_3687	SLBP	NM_006527.2	NM_006527.2		7884	19913344	NM_006527.2	SLBP	NP_006518.1	ILMN_2055700	0004280603	S	1499	GCACTAGTTAGACTCTTTAGAATACTCCAAGAGTTAGGGCAGCAGAGTGG	4	-	1694703-1694752	4p16.3b	Homo sapiens stem-loop binding protein (SLBP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9049306] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [pmid 10825184] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in forming the mature 3' end of a histone mRNA molecule [goid 6398] [pmid 9049306] [evidence TAS]	Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 9049306] [evidence TAS]	HBP	HBP
Homo sapiens	RefSeq	XR_015123.1	ILMN_167077	LOC727753	XR_015123.1	XR_015123.1		727753	113415623	XR_015123.1	LOC727753		ILMN_3281387	0004220176	M	1267	GATTTTGTGGGGGAACTCCACTGTAAACCAGCCAAAACCCTGCCTAAGAT	4	-	69526018-69526020:69527190-69527236	4q13.2c	PREDICTED: Homo sapiens misc_RNA (LOC727753), miscRNA.					
Homo sapiens	RefSeq	NM_005718.3	ILMN_24602	ARPC4	NM_005718.3	NM_005718.3		10093	68161505	NM_005718.3	ARPC4	NP_005709.1	ILMN_1803183	0002230068	I	298	AAGGTGACAAGAAGGCCGAAGGCACAAAGGGAAGCTGCACCCATTCCTGG	3	+	9809524-9809573	3p25.3c	Homo sapiens actin related protein 2/3 complex, subunit 4, 20kDa (ARPC4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [pmid 9230079] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IEA]; The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament. Nucleation is slow relative to the subsequent addition of more monomers to extend the filament [goid 45010] [pmid 11162547] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9230079] [evidence TAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 11162547] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 11162547] [evidence TAS]	ARC20; p20-Arc; MGC13544	ARC20; p20-Arc; MGC13544
Homo sapiens	RefSeq	NM_173557.1	ILMN_12862	RNF152	NM_173557.1	NM_173557.1		220441	27734872	NM_173557.1	RNF152	NP_775828.1	ILMN_1802248	0005090041	S	2548	GGTGAGGAGGGTTGGGGGGAAGTGAAGGAAAGACAAGCAGGGCTAATTCC	18	-	57632491-57632540	18q21.33a	Homo sapiens ring finger protein 152 (RNF152), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ39176	FLJ39176
Homo sapiens	RefSeq	XM_001126276.1	ILMN_170954	LOC730288	XM_001126276.1	XM_001126276.1		730288	113419589	XM_001126276.1	LOC730288	XP_001126276.1	ILMN_3235013	0002640358	S	121	TCCAGCATCCGCAGTGTAAAAGGCCCCGTGTGTGAGGGGGACGTGCTCAC	7	+	70740334-70740383		PREDICTED: Homo sapiens similar to 40S ribosomal protein S28 (LOC730288), mRNA.					
Homo sapiens	RefSeq	NM_031965.2	ILMN_2824	GSG2	NM_031965.2	NM_031965.2		83903	56790918	NM_031965.2	GSG2	NP_114171.2	ILMN_1709085	0002900692	S	2448	GCCCCGAAATGAGAGGAGACTGGTCTTGAAGCCTCTGGTGCTGTTTCAAC	17	+	3576393-3576442	17p13.3a	Homo sapiens germ cell associated 2 (haspin) (GSG2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11228240] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 11228240] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 11228240] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11228240] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_003922.2	ILMN_4972	HERC1	NM_003922.3	NM_003922.3		8925	126131098	NM_003922.3	HERC1	NP_003913.3	ILMN_1786211	0001820274	S	14719	CGACACTGACTACTGACCGTGCGGGTGCTCTCACCCTCCCTTCTCTCCCT	15	-	63901245-63901279:63901280-63901294	15q22.31a	Homo sapiens hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1 (HERC1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8861955] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 8861955] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [pmid 8861955] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	p619; p532	p619; p532
Homo sapiens	RefSeq	NM_001018056.1	ILMN_14444	VLDLR	NM_001018056.1	NM_001018056.1		7436	65301163	NM_001018056.1	VLDLR	NP_001018066.1	ILMN_2361862	0005390661	A	2960	GAGGTCTAAACAAATAATACCCCCGTCGGAATGGTAACCGAGCCAGCAGC	9	+	2638670-2638719	9p24.2b	Homo sapiens very low density lipoprotein receptor (VLDLR), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 15082773] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10380922] [evidence TAS]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10380922] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380922] [evidence TAS]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [pmid 7550352] [evidence TAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [pmid 10380922] [evidence TAS]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ35024; VLDLRCH	FLJ35024; VLDLRCH
Homo sapiens	RefSeq	NR_024392.1	ILMN_370139	HSPBL2	NR_024392.1	NR_024392.1		653553	211971084	NR_024392.1	HSPBL2		ILMN_3236821	0005420474	S	49	TTCACGCGGAAATACACGCTGCCCCACCGGTGTGGACCCCACTCAGGTCT	9	-	74622954-74623003	9q21.13a	Homo sapiens heat shock 27kDa protein-like 2 pseudogene (HSPBL2), non-coding RNA.					
Homo sapiens	RefSeq	XM_945176.1	ILMN_45998	LOC652054	XM_945176.1	XM_945176.1		652054	89034630	XM_945176.1	LOC652054	XP_950269.1	ILMN_1709968	0006450435	S	208	AAAAGCGGCCATCAGCCTGAGTCCAGGATGACTGTGCACAGAAGGGTTGC					PREDICTED: Homo sapiens hypothetical protein LOC652054 (LOC652054), mRNA.					
Homo sapiens	RefSeq	NM_015277.2	ILMN_18912	NEDD4L	NM_015277.3	NM_015277.3		23327	141801823	NM_015277.3	NEDD4L	NP_056092.2	ILMN_1733627	0001570273	S	4518	CCCTGCTGTCCTTTTTAACCTGTGTTGTCCTAGACCCTGTCGGGGCAGTC	18	+	54216018-54216067	18q21.31b	Homo sapiens neural precursor cell expressed, developmentally down-regulated 4-like (NEDD4L), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11244092] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 11244092] [evidence NAS]; The regulation of the levels, transport, and metabolism of sodium ions within a cell or between a cell and its external environment [goid 6883] [pmid 11244092] [evidence NAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 11244092] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus [goid 10038] [pmid 11244092] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 11244092] [evidence NAS]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [pmid 11244092] [evidence NAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [pmid 11244092] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of endocytosis [goid 45807] [pmid 11244092] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11244092] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11244092] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA];  [goid 17080] [pmid 11244092] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ33870; KIAA0439; RSP5; hNedd4-2	FLJ33870; RSP5; KIAA0439; hNedd4-2
Homo sapiens	RefSeq	NM_181739.1	ILMN_12799	LINS1	NM_181739.1	NM_181739.1		55180	32454730	NM_181739.1	LINS1	NP_859523.1	ILMN_1669624	0005890220	A	321	TCCAGGGCAGGCATCAGCCCATCTCTGTTGGTGTGGCTCCCATTGCTGTA	15	-	98938357-98938406	15q26.3c	Homo sapiens lines homolog 1 (Drosophila) (LINS1), transcript variant 2, mRNA.				FLJ10583; WINS1	FLJ10583; WINS1
Homo sapiens	RefSeq	NM_000321.1	ILMN_4636	RB1	NM_000321.2	NM_000321.2		5925	108773786	NM_000321.2	RB1	NP_000312.2	ILMN_1696591	0006280474	S	3249	TGGCCCTAGAGTGGGAGTCCTGATAACCCAGGCCTGTCTGACTACTTTGC	13	+	47952504-47952553	13q14.2b	Homo sapiens retinoblastoma 1 (RB1), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 3657987] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 3657987] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9190208] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 14527418] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9448006] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 3413073] [evidence NAS]	A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [pmid 10825186] [evidence TAS]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9491888] [evidence TAS]; Progression through M phase, the part of the cell cycle comprising nuclear division [goid 279] [pmid 7542657] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [pmid 9858607] [evidence IPI]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 7542657] [evidence TAS]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; Any process that modulates the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid [goid 43550] [pmid 16286473] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Progression through G1 phase, one of two 'gap' phases in the cell cycle; G1 is the interval between the completion of DNA segregation (usually by mitosis or meiosis) and the beginning of DNA synthesis [goid 51318] [pmid 7542657] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 3413073] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 3657987] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with a kinase, any enzyme that catalyzes the transfer of a phosphate group [goid 19900] [pmid 16286473] [evidence IDA]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 3413073] [evidence ND ]	RB; OSRC	RB; OSRC
Homo sapiens	RefSeq	XM_002348051.1	ILMN_379690	DEFB117	XM_002348051.1	XM_002348051.1		245931	239751979	XM_002348051.1	DEFB117	XP_002348092.1	ILMN_3307967	0007650408	A	25	CGTCAGTCTGCAGGAGCCAAAAATCTTGCTGGATCATAAAAGGACACTGC					PREDICTED: Homo sapiens defensin, beta 117 (DEFB117), mRNA.					
Homo sapiens	RefSeq	NM_152548.1	ILMN_18193	FAM81B	NM_152548.1	NM_152548.1		153643	22749142	NM_152548.1	FAM81B	NP_689761.1	ILMN_1759679	0003840671	S	1210	GGAACAAATGGAAAAGCAGATCTGGGGTGAATTAGAGACAATGCAGAATG	5	+	94809863-94809912	5q15c	Homo sapiens family with sequence similarity 81, member B (FAM81B), mRNA.				FLJ25333	FLJ25333
Homo sapiens	RefSeq	NM_152403.2	ILMN_21200	EGFLAM	NM_152403.2	NM_152403.2		133584	33469928	NM_152403.2	EGFLAM	NP_689616.2	ILMN_1711346	0007380092	I	796	GTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAAGGAAGCGCCCCTATTCA	5	+	38294664-38294710:38337622-38337624	5p13.2a-p13.1c	Homo sapiens EGF-like, fibronectin type III and laminin G domains (EGFLAM), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AGRINL; AGRNL; FLJ39155	AGRINL; AGRNL; FLJ39155
Homo sapiens	RefSeq	NM_203311.1	ILMN_21965	CSAG3A	NM_203311.1	NM_203311.1		389903	42600568	NM_203311.1	CSAG3A	NP_976056.1	ILMN_1671808	0001230609	S	213	CTAGGACTTCCAGACTTCAAAACTTTTCTAGCCTGCTGGCCTGCCTTCAC	X	-	151628119-151628145:151628600-151628622	Xq28e	Homo sapiens CSAG family, member 3A (CSAG3A), mRNA.				MGC17065	MGC17065
Homo sapiens	RefSeq	NM_203311.1	ILMN_21965	CSAG3A	NM_203311.1	NM_203311.1		389903	42600568	NM_203311.1	CSAG3A	NP_976056.1	ILMN_2043126	0004010095	S	166	GCCACGAATAAGGCCATCACCAGAAGCCAACCCCGCCAGTCCTTGATCTA	X	-	151628620-151628669	Xq28e	Homo sapiens CSAG family, member 3A (CSAG3A), mRNA.				MGC17065	MGC17065
Homo sapiens	RefSeq	NR_001295.1	ILMN_4521	SNORD109A	NR_001295.1	NR_001295.1		338428	30089683	NR_001295.1	SNORD109A		ILMN_3245599	0007100474	S	5	CGATGATGAGAATAATTGTCTGAGGATGCTGAGGGACTCATTCCAGATGT	15	+	22838218-22838267	15q11.2e	Homo sapiens small nucleolar RNA, C/D box 109A (SNORD109A), small nucleolar RNA.				HBII-438A	HBII-438A
Homo sapiens	Unigene	Hs.105102	ILMN_74886	HS.105102	Hs.105102		Hs.105102		2209683	AA482005			ILMN_1899018	0001030681	S	157	CCCCATAATCTTGTGACCAGGTGGCGTGTTACAATGAAAGCAAGTGTTGC	2	+	216512302-216512351		zu98b06.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:746003 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006564.1	ILMN_14583	CXCR6	NM_006564.1	NM_006564.1		10663	5730105	NM_006564.1	CXCR6	NP_006555.1	ILMN_1674640	0006550333	S	1553	TGCTGGCACCACCAGGCACCTCACAGAAATGAGATCAGGCTCTGCCTCAC	3	+	45964449-45964498	3p21.31i	Homo sapiens chemokine (C-X-C motif) receptor 6 (CXCR6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9166430] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9166430] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 9230441] [evidence TAS]	Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 9166430] [evidence TAS]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	TYMSTR; STRL33; BONZO; CD186	TYMSTR; STRL33; BONZO; CD186
Homo sapiens	RefSeq	NM_032783.3	ILMN_15505	CBR4	NM_032783.3	NM_032783.3		84869	55775472	NM_032783.3	CBR4	NP_116172.2	ILMN_1813400	0005810750	S	3030	CTGTAGCTGTTTGCTGACTCCTATGAGCCCATAAGGGTTCTGTGCTTAGC	4	-	170145692-170145741	4q32.3e	Homo sapiens carbonyl reductase 4 (CBR4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ14431	FLJ14431
Homo sapiens	RefSeq	NM_004165.1	ILMN_8976	RRAD	NM_004165.1	NM_004165.1		6236	4759053	NM_004165.1	RRAD	NP_004156.1	ILMN_2186137	0005570520	S	1162	GCCAGCCGGGCACCCCCAACCTCATGGTCATGGACAGATAGACAGTGCTG	16	-	65513318-65513367	16q22.1a	Homo sapiens Ras-related associated with diabetes (RRAD), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 8248782] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8248782] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	REM3; RAD; RAD1	REM3; RAD; RAD1
Homo sapiens	RefSeq	NM_004165.1	ILMN_8976	RRAD	NM_004165.1	NM_004165.1		6236	4759053	NM_004165.1	RRAD	NP_004156.1	ILMN_1683179	0007200639	S	904	AACGCACGACGGCAAGCAGGCACCCGGAGGCGAGAGAGCCTTGGCAAAAA	16	-	65513576-65513625	16q22.1a	Homo sapiens Ras-related associated with diabetes (RRAD), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 8248782] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8248782] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	REM3; RAD; RAD1	REM3; RAD; RAD1
Homo sapiens	RefSeq	NM_000503.3	ILMN_17045	EYA1	NM_000503.3	NM_000503.3		2138	26667213	NM_000503.3	EYA1	NP_000494.2	ILMN_1747207	0001260605	I	471	TGAGAGCCCCCGCGCGTACCCATCCAGGAGCAAAACTATGTCAGGAATGG	8	-	72436501-72436550	8q13.3b-q13.3c	Homo sapiens eyes absent homolog 1 (Drosophila) (EYA1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9020840] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9020840] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	BOP; MGC141875; BOR	BOP; MGC141875; BOR
Homo sapiens	RefSeq	NM_199003.1	ILMN_15272	THAP1	NM_199003.1	NM_199003.1		55145	40068499	NM_199003.1	THAP1	NP_945354.1	ILMN_2301955	0004180279	A	1570	TTGTATCATATGATAATCTTGCACTTGACTGAGTTGGGACAAGGCTTCAC	8	-	42811325-42811374	8p11.21a	Homo sapiens THAP domain containing, apoptosis associated protein 1 (THAP1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ10477; MGC33014	FLJ10477; MGC33014
Homo sapiens	RefSeq	NM_182779.2	ILMN_17277	DVL1	NM_182779.3	NM_182779.3		1855	148539849	NM_182779.3	DVL1	NP_877580.1	ILMN_1678564	0003800575	A	968	CTTTAGCTATGGCAGCGGCAGCACCGGGAGTCAGCAGAGTGAAGGGAGCA	1	-	1261752-1261758:1263220-1263262	1p36.33a	Homo sapiens dishevelled, dsh homolog 1 (Drosophila) (DVL1), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9192851] [evidence TAS]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 8817329] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8817329] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14750955] [evidence IPI]	DVL; MGC54245	DVL; MGC54245
Homo sapiens	RefSeq	XM_942445.1	ILMN_17277	DVL1	NM_182779.3	NM_182779.3		1855	148539849	NM_182779.3	DVL1	NP_877580.1	ILMN_1657278	0005960609	S	280	TGGTCTCCTGGCTGGTCCTGGCTGAGGGTGCTCACTCGGATGCGGGGTCC	1	-	1267688-1267727:1267932-1267941	1p36.33a	Homo sapiens dishevelled, dsh homolog 1 (Drosophila) (DVL1), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9192851] [evidence TAS]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 8817329] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8817329] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14750955] [evidence IPI]	DVL; MGC54245	
Homo sapiens	RefSeq	XM_933228.1	ILMN_44142	LOC645871	XM_933228.1	XM_933228.1		645871	89030871	XM_933228.1	LOC645871	XP_938321.1	ILMN_1756914	0000380072	S	1	ATGCATGACTGTACTTCAAAACCATACAACCCCGCTACGGGATCCCTGAC	10	-	30395483-30395496:30396655-30396690		PREDICTED: Homo sapiens hypothetical protein LOC645871 (LOC645871), mRNA.					
Homo sapiens	RefSeq	NM_014512.1	ILMN_163945	KIR2DS1	NM_014512.1	NM_014512.1		3806	7657276	NM_014512.1	KIR2DS1	NP_055327.1	ILMN_2166812	0005670291	S	610	CGGCTCTTTCCGTGACTCTCCATACGAGTGGTCAAAGTCAAGTGACCCAC	19|NT_113949.1	+	118737-118786		Homo sapiens killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 1 (KIR2DS1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8627176] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8627176] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 8627176] [evidence NAS]	EB6ActII; p50.1; CD158a; EB6ActI; CD158H	p50.1; EB6ActI; EB6ActII; CD158a; CD158H
Homo sapiens	RefSeq	NM_138408.2	ILMN_16996	GTF3C6	NM_138408.2	NM_138408.2		112495	50355976	NM_138408.2	GTF3C6	NP_612417.1	ILMN_2074880	0000580386	S	830	TGGAAACTCAAATGCTGCCTTAGAAATCACTCTCCTAGATGAAATGTTTC	6	+	111395664-111395686:111395687-111395713	6q21h	Homo sapiens general transcription factor IIIC, polypeptide 6, alpha 35kDa (GTF3C6), mRNA.	A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species [goid 127] [pmid 17409385] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of RNA on a template of DNA [goid 6351] [pmid 17409385] [evidence IDA]; The synthesis of 5S ribosomal RNA (rRNA), or an equivalent rRNA, from a DNA template [goid 42791] [pmid 17409385] [evidence IC ]; The synthesis of transfer RNA (tRNA) from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III promoter [goid 42797] [pmid 17409385] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 17409385] [evidence IDA]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 17409385] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17409385] [evidence IPI]	C6orf51; TFIIIC35; bA397G5.3	C6orf51; TFIIIC35; bA397G5.3
Homo sapiens	RefSeq	NM_138408.2	ILMN_16996	GTF3C6	NM_138408.2	NM_138408.2		112495	50355976	NM_138408.2	GTF3C6	NP_612417.1	ILMN_1691578	0004200110	S	246	CGGAGAAGACGAGGAAGAGGAGGAGCAGTTGGTTCTGGTGGAATTATCAG	6	+	111386701-111386722:111387068-111387095	6q21h	Homo sapiens general transcription factor IIIC, polypeptide 6, alpha 35kDa (GTF3C6), mRNA.	A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species [goid 127] [pmid 17409385] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of RNA on a template of DNA [goid 6351] [pmid 17409385] [evidence IDA]; The synthesis of 5S ribosomal RNA (rRNA), or an equivalent rRNA, from a DNA template [goid 42791] [pmid 17409385] [evidence IC ]; The synthesis of transfer RNA (tRNA) from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III promoter [goid 42797] [pmid 17409385] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 17409385] [evidence IDA]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 17409385] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17409385] [evidence IPI]	C6orf51; TFIIIC35; bA397G5.3	C6orf51; TFIIIC35; bA397G5.3
Homo sapiens	RefSeq	NM_022062.1	ILMN_24691	PKNOX2	NM_022062.2	NM_022062.2		63876	116812643	NM_022062.2	PKNOX2	NP_071345.2	ILMN_1807689	0000870575	S	3252	CCACCTGGTTGGGGTAGAGCAAAAGGATGGTCACTCTTCCGAGGTCTCCC	11	+	124808017-124808066	11q24.2b	Homo sapiens PBX/knotted 1 homeobox 2 (PKNOX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IEA]	FLJ13074; PREP2	FLJ13074; PREP2
Homo sapiens	RefSeq	NM_032539.2	ILMN_12380	SLITRK2	NM_032539.2	NM_032539.2		84631	40217818	NM_032539.2	SLITRK2	NP_115928.1	ILMN_1795170	0000150482	S	4922	ACTAAGGGGATTTAACAGTGGACTAGAGGTAATAAGCCACCTCAGTCAGG	X	+	144714965-144715014	Xq27.3c	Homo sapiens SLIT and NTRK-like family, member 2 (SLITRK2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC129913; SLITL1; DKFZp451E1911; CXorf2; MGC129912; KIAA1854	MGC129913; SLITL1; DKFZp451E1911; CXorf2; MGC129912; KIAA1854
Homo sapiens	RefSeq	NR_024060.1	ILMN_366493	FAM27A	NR_024060.1	NR_024060.1		548321	195927028	NR_024060.1	FAM27A		ILMN_3248078	0001660725	S	315	GCCGAGAACAAGAGCCCCAGAGGAACTCTTTGTCCCACAGGAGAGCAGCG					Homo sapiens family with sequence similarity 27, member A (FAM27A), non-coding RNA.					
Homo sapiens	RefSeq	NM_002081.1	ILMN_15161	GPC1	NM_002081.1	NM_002081.1		2817	4504080	NM_002081.1	GPC1	NP_002072.1	ILMN_1801516	0007160504	S	3379	GGATCAGGAGCCCCCAACACAGGCAAGTCCACCCCATAATAACCCTGCCA	2	+	241055861-241055910	2q37.3e	Homo sapiens glypican 1 (GPC1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2148568] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2148568] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			glypican; FLJ38078	glypican; FLJ38078
Homo sapiens	RefSeq	NM_001005517.1	ILMN_169432	OR5K4	NM_001005517.1	NM_001005517.1		403278	53933286	NM_001005517.1	OR5K4	NP_001005517.1	ILMN_2161166	0004570270	S	689	CCAAGGAGGGAAGAGGTAAAGCATTTTCTACCTGTGCATCCCACTTTCTC	3	+	98073386-98073435	3q11.2c	Homo sapiens olfactory receptor, family 5, subfamily K, member 4 (OR5K4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_004176.3	ILMN_21143	SREBF1	NM_004176.3	NM_004176.3		6720	52630417	NM_004176.3	SREBF1	NP_004167.3	ILMN_2328986	0006840044	A	3598	TCATGCGCCTGGGCGGTGGGACCACTGTCACTTCCAGCTAGACCCCGTGT	17	-	17656651-17656660:17656661-17656700	17p11.2g	Homo sapiens sterol regulatory element binding transcription factor 1 (SREBF1), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8156598] [evidence TAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 8156598] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 8156598] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8156598] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8156598] [evidence TAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of nourishment [goid 9267] [pmid 16407292] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 16407292] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 8156598] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16799563] [evidence IPI]; Interacting selectively with the sterol response element (SRE), a nonpalindromic sequence found in the promoters of genes involved in lipid metabolism [goid 32810] [pmid 16407292] [evidence IDA]	SREBP1	SREBP1
Homo sapiens	Unigene	Hs.122007	ILMN_75811	HS.122007	Hs.122007		Hs.122007		3961903	AI302557			ILMN_1834569	0004490561	S	265	GCAGCATCCTCTGTCCTGCACTGGGTAAGGGCTTATGGTTTGCTGTGTGC					qn52b08.x1 NCI_CGAP_Kid5 Homo sapiens cDNA clone IMAGE:1901847 3, mRNA sequence					
Homo sapiens	RefSeq	NM_024319.2	ILMN_28904	C1ORF35	NM_024319.2	NM_024319.2		79169	34147378	NM_024319.2	C1orf35	NP_077295.1	ILMN_1790202	0005820500	S	992	TCCTGTGGAAGTGGCTCTGGGCACCAGCCTGTGGGGCTAAAGACTTGACA	1	-	228288676-228288725	1q42.13c	Homo sapiens chromosome 1 open reading frame 35 (C1orf35), mRNA.				MMTAG2; MGC4174	MMTAG2; MGC4174
Homo sapiens	RefSeq	NM_017545.2	ILMN_17062	HAO1	NM_017545.2	NM_017545.2		54363	11184232	NM_017545.2	HAO1	NP_060015.1	ILMN_2211546	0001740131	S	1580	CACAACTTTGAGAAGGTAGCACTGGAGAGAATTGGAATGGGTGGCGGTAA	20	-	7863908-7863957	20p12.3a	Homo sapiens hydroxyacid oxidase (glycolate oxidase) 1 (HAO1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10777549] [evidence TAS]	Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [pmid 10777549] [evidence TAS]; The reactions of the C2 pathway bring about the metabolic conversion of two molecules of 2-phosphoglycolate to one molecule of 3-phosphoglycerate, which can be used by the C3 cycle, and one molecule of carbon dioxide (CO2) [goid 9854] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + H2O2 [goid 3973] [pmid 10777549] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	HAOX1; GOX1; GOX; MGC142225; MGC142227	HAOX1; GOX1; GOX; MGC142225; MGC142227
Homo sapiens	RefSeq	NM_017545.2	ILMN_17062	HAO1	NM_017545.2	NM_017545.2		54363	11184232	NM_017545.2	HAO1	NP_060015.1	ILMN_1674588	0007610403	S	1058	CTCTGAGTGGGTGCCAGAATGTGAAAGTCATCGACAAGACATTGGTGAGG	20	-	7866402-7866451	20p12.3a	Homo sapiens hydroxyacid oxidase (glycolate oxidase) 1 (HAO1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10777549] [evidence TAS]	Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [pmid 10777549] [evidence TAS]; The reactions of the C2 pathway bring about the metabolic conversion of two molecules of 2-phosphoglycolate to one molecule of 3-phosphoglycerate, which can be used by the C3 cycle, and one molecule of carbon dioxide (CO2) [goid 9854] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + H2O2 [goid 3973] [pmid 10777549] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	HAOX1; GOX1; GOX; MGC142225; MGC142227	HAOX1; GOX1; GOX; MGC142225; MGC142227
Homo sapiens	Unigene	Hs.120208	ILMN_75619	HS.120208	Hs.120208		Hs.120208		27825685	BX093310			ILMN_1855868	0000650129	S	48	GGTGGGGATTCTGGAACAATCATCTTAGGGGGTGTGCCATGCTGTTCCTG	2	+	59336810-59336859		BX093310 NCI_CGAP_GC4 Homo sapiens cDNA clone IMAGp998F143166 ; IMAGE:1257997, mRNA sequence					
Homo sapiens	RefSeq	NM_175066.2	ILMN_165366	DDX51	NM_175066.2	NM_175066.2		317781	37059776	NM_175066.2	DDX51	NP_778236.1	ILMN_2215382	0004390661	S	2701	GGGAGGCCGAGGCAGGTGGATCACAAGGTCAGGAGATAGAGACCATCATT	12	-	131189032-131189081	12q24.33c	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (DDX51), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp686N2081; MGC42193	DKFZp686N2081; MGC42193
Homo sapiens	RefSeq	NM_006002.3	ILMN_5191	UCHL3	NM_006002.3	NM_006002.3		7347	37059734	NM_006002.3	UCHL3	NP_005993.1	ILMN_1660111	0007160180	S	457	GCCATCCGAGTTACTCATGAGACCAGTGCCCATGAAGGTCAGACTGAGGC	13	+	75041597-75041644:75067052-75067053	13q22.2a	Homo sapiens ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) (UCHL3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence NAS]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [pmid 2530630] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	UCH-L3	UCH-L3
Homo sapiens	RefSeq	NR_002730.2	ILMN_371399	BRD7P3	NR_002730.2	NR_002730.2		23629	209862770	NR_002730.2	BRD7P3		ILMN_3245301	0000360551	S	2290	AGGAGCAAATGCAATACAGGGGAAAAAACAGCCCTTTCAACAAATGGTGC	6	+	118824825-118824874	6q22.31a	Homo sapiens bromodomain containing 7 pseudogene 3 (BRD7P3), non-coding RNA.					
Homo sapiens	RefSeq	NM_152590.1	ILMN_15067	IFLTD1	NM_152590.1	NM_152590.1		160492	22749214	NM_152590.1	IFLTD1	NP_689803.1	ILMN_1725833	0003290437	S	1385	CTCAAATCCCTGAGGCCTGCTCTGCAACCTCCCTGCTATTCCATGAGAGG	12	-	25520566-25520615	12p12.1a	Homo sapiens intermediate filament tail domain containing 1 (IFLTD1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	Pas1c1; FLJ36004	Pas1c1; FLJ36004
Homo sapiens	RefSeq	NM_175728.1	ILMN_17920	IL5RA	NM_000564.2	NM_000564.2		3568	28559020	NM_000564.2	IL5RA	NP_000555.2	ILMN_1756455	0000830519	A	1521	CTAAGTACGATGTTCAAGTGAGAGCAGCAGTGAGCTCCATGTGCAGAGAG	3	-	3108948-3108997	3p26.3a	Homo sapiens interleukin 5 receptor, alpha (IL5RA), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1495999] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1495999] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1732409] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 1732409] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with interleukin-5 to initiate a change in cell activity [goid 4914] [pmid 1495999] [evidence TAS]	HSIL5R3; CDw125; IL5R; MGC26560	HSIL5R3; CDw125; CD125; IL5R; MGC26560
Homo sapiens	RefSeq	NM_130848.1	ILMN_168565	C5ORF20	NM_130848.2	NM_130848.2		140947	116734715	NM_130848.2	C5orf20	NP_570900.1	ILMN_1701911	0002000162	S	2937	CATTGCAGCCGTTCACCGGACACCGCACCAGACCCTCAAAACCCATCCAA	5	-	134807951-134808000	5q31.1f	Homo sapiens chromosome 5 open reading frame 20 (C5orf20), mRNA.				DCNP1	DCNP1
Homo sapiens	RefSeq	XM_929610.1	ILMN_31577	LOC646667	XM_929610.2	XM_929610.2		646667	113428359	XM_929610.2	LOC646667	XP_934703.2	ILMN_1696748	0006620253	S	956	ACACCGCAGCCTCGGAAATTACACCGCAGCCACGGAAATTACACCGCAGC	19	-	61053611-61053660	19q13.42c	PREDICTED: Homo sapiens similar to proline-rich glycoprotein (sgp158) (LOC646667), mRNA.					
Homo sapiens	RefSeq	NM_201550.2	ILMN_4610	LRRC10	NM_201550.2	NM_201550.2		376132	63003902	NM_201550.2	LRRC10	NP_963844.2	ILMN_1754558	0005340273	S	2051	ACAGGCATGAGCCACCACACCCAGCCTTCAGCTGTCACCTTAAACTTGAC	12	-	70002842-70002891	12q15c	Homo sapiens leucine rich repeat containing 10 (LRRC10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC125812; HRLRRP	MGC125812; HRLRRP
Homo sapiens	RefSeq	NM_005054.1	ILMN_137967	RANBP2L1	NM_005054.1	NM_005054.1		84220	19718754	NM_005054.1	RANBP2L1	NP_005045.1	ILMN_1793655	0004610162	S	5390	TAGTTGGTTTGGACTTCGATAGGTTGATGGAAGGAATACTTCTATTAACT	2	+	109970777-109970826	2q13b	Homo sapiens RAN binding protein 2-like 1 (RANBP2L1), transcript variant 1, mRNA.				DKFZp686I1842; BS-63; RanBP2alpha	RanBP2alpha; DKFZp686I1842; BS-63
Homo sapiens	Unigene	Hs.551126	ILMN_110495	HS.551126	Hs.551126		Hs.551126		10433406	AK022085			ILMN_1828967	0000240397	S	2027	CTCTGCCTTCAATCTGAGTGACATCAGACTCAGAGCCCACACTTTAAGGC	8	+	15679931-15679978		Homo sapiens cDNA FLJ12023 fis, clone HEMBB1001785					
Homo sapiens	RefSeq	XM_001724220.1	ILMN_350102	LOC100132202	XM_001724220.1	XM_001724220.1		100132202	169208520	XM_001724220.1	LOC100132202	XP_001724272.1	ILMN_3247529	0000780451	S	585	AAGGGCAGATCGCCTTCATCTACTTCGGGACTAAGCTGGTTCAAAGCAGG	15	+	26606805-26606854	15q13.1b	PREDICTED: Homo sapiens hypothetical protein LOC100132202 (LOC100132202), mRNA.					
Homo sapiens	RefSeq	NM_021954.2	ILMN_176444	GJA3	NM_021954.3	NM_021954.3		2700	115392136	NM_021954.3	GJA3	NP_068773.2	ILMN_1731516	0005490619	S	963	TTGCCATCGGGTTCCCACCCTACTATGCGCACACCGCTGCGCCCCTGGGA	13	-	20716587-20716636	13q12.11a	Homo sapiens gap junction protein, alpha 3, 46kDa (GJA3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9413992] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9413992] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10205266] [evidence TAS]		CZP3; CX46	CZP3; CX46; CAE2; CAE3; CZP2
Homo sapiens	RefSeq	Hs.130313	ILMN_176444	GJA3	NM_021954.3	NM_021954.3		2700	115392136	NM_021954.3	GJA3	NP_068773.2	ILMN_1876266	0001580128	S	4896	TATTACAGTGCAAATCTTGGGTTGACTCACTTTAAGGTTTCTGACTGCCC	13	-	20712654-20712703	13q12.11a	Homo sapiens gap junction protein, alpha 3, 46kDa (GJA3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9413992] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9413992] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10205266] [evidence TAS]		CZP3; CX46	
Homo sapiens	RefSeq	NM_016529.3	ILMN_11255	ATP8A2	NM_016529.4	NM_016529.4		51761	117168244	NM_016529.4	ATP8A2	NP_057613.4	ILMN_1693896	0004590577	S	4459	GCCAACCCAAACCCGCGCCTTTCCTTGTTCCACTGCAGACTCAGATACAG	13	+	25492873-25492922	13q12.13a-q12.13b	Homo sapiens ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 (ATP8A2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10551800] [evidence TAS]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	ATP; ML-1; ATPIB; DKFZP434B1913; IB	ATP; ML-1; ATPIB; DKFZP434B1913; IB
Homo sapiens	Unigene	Hs.137971	ILMN_77841	HS.137971	Hs.137971		Hs.137971		10855524	AV737943			ILMN_1897741	0006020692	S	362	GTTTGGGGTGTCAATTTTCTATCAACGCAAACACCTTAGGGTACCCAGAC	5	+	10490848-10490897		AV737943 CB Homo sapiens cDNA clone CBDAEG06 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001014433.2	ILMN_6058	CUTA	NM_001014838.1	NM_001014838.1		51596	62526023	NM_001014838.1	CUTA	NP_001014838.1	ILMN_1712390	0001030427	A	839	AACAGGGGAACTTTCCGTACCTGCAGTGGGTGCGCCAGGTCACAGAGTCA	6	-	33492434-33492483	6p21.32a	Homo sapiens cutA divalent cation tolerance homolog (E. coli) (CUTA), transcript variant 4, mRNA.				MGC111154; C6orf82; ACHAP	MGC111154; C6orf82; ACHAP
Homo sapiens	RefSeq	XM_933934.1	ILMN_31419	KIAA1751	XM_933934.1	XM_933934.1		85452	88942276	XM_933934.1	KIAA1751	XP_939027.1	ILMN_1763521	0005130070	I	19	AGCGTCTGCCCTCCGCAGCACTAACCCCCGTGTGCTATGGGTCACGTCCT	1	-	1881333-1881382	1p36.33a	PREDICTED: Homo sapiens KIAA1751, transcript variant 2 (KIAA1751), mRNA.					
Homo sapiens	RefSeq	NR_002564.1	ILMN_21627	SNORD26	NR_002564.1	NR_002564.1		9302	74315931	NR_002564.1	SNORD26		ILMN_1691550	0006590408	S	26	ACTCTCTCTTTCTGATGGATTAGTGGAGAAAACAGAAAATTCTGAGTAGC	11	-	62379414-62379414:62622764-62622812	11q12.3b	Homo sapiens small nucleolar RNA, C/D box 26 (SNORD26), small nucleolar RNA.				U26; RNU26	U26; RNU26
Homo sapiens	RefSeq	NM_052962.2	ILMN_15199	IL22RA2	NM_052962.2	NM_052962.2		116379	31317244	NM_052962.2	IL22RA2	NP_443194.1	ILMN_1653324	0002370088	A	1938	TGGCCAAGAGTGTCTTGCTTGTGGCGCCTTCCTCATCTCTATATAGGAGG	6	-	137507559-137507608	6q23.3c	Homo sapiens interleukin 22 receptor, alpha 2 (IL22RA2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11390453] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11390454] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence ISS]; Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with interleukin-22 to initiate a change in cell activity [goid 42018] [pmid 11390454] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CRF2-S1; MGC150509; IL-22BP; MGC150510; CRF2X; CRF2-10	CRF2-S1; MGC150509; IL-22BP; MGC150510; CRF2-10; CRF2X
Homo sapiens	RefSeq	NM_052962.2	ILMN_15199	IL22RA2	NM_052962.2	NM_052962.2		116379	31317244	NM_052962.2	IL22RA2	NP_443194.1	ILMN_1805385	0006550068	I	542	GGATGCTGGCAGCACATTTCTTGTAACTTCCCAGGCTGCAGAACATTGGC	6	-	137519591-137519640	6q23.3c	Homo sapiens interleukin 22 receptor, alpha 2 (IL22RA2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11390453] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11390454] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence ISS]; Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with interleukin-22 to initiate a change in cell activity [goid 42018] [pmid 11390454] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CRF2-S1; MGC150509; IL-22BP; MGC150510; CRF2X; CRF2-10	CRF2-S1; MGC150509; IL-22BP; MGC150510; CRF2-10; CRF2X
Homo sapiens	RefSeq	NR_024249.1	ILMN_370510	LOC645332	NR_024249.1	NR_024249.1		645332	209954658	NR_024249.1	LOC645332		ILMN_3239168	0001070180	S	1695	GGCCAAGTCCCACCCATCTGTGGGTAACAAGGGGGTGTTGGTGTTCTTTT	11	-	67559352-67559401	11q13.2a	Homo sapiens family with sequence similarity 86, member A pseudogene (LOC645332), non-coding RNA.					
Homo sapiens	RefSeq	NM_152312.2	ILMN_23778	GYLTL1B	NM_152312.3	NM_152312.3		120071	116235481	NM_152312.3	GYLTL1B	NP_689525.3	ILMN_1697916	0001850435	S	2185	GAATTCCACCAGGACTTGTCCCGCCACCATGGGGCTGCTGCCCTCAAATA	11	+	45906880-45906929	11p11.2c	Homo sapiens glycosyltransferase-like 1B (GYLTL1B), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence ISS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	FLJ35207; LARGE2; PP5656	FLJ35207; LARGE2; PP5656
Homo sapiens	RefSeq	NM_198205.1	ILMN_10243	MLX	NM_198205.1	NM_198205.1		6945	38201613	NM_198205.1	MLX	NP_937848.1	ILMN_1792207	0002570768	A	2157	GAGATGTCACCAGGATAAGACCACAGGGAAGCAAAGAAGGAAGAGAGCTC	17	+	37978594-37978643	17q21.31a	Homo sapiens MAX-like protein X (MLX), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10918583] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10918583] [evidence IDA]	The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11230181] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10918583] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 11230181] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11230181] [evidence IDA]	TCFL4; MXD7; MAD7	TCFL4; MXD7; MAD7
Homo sapiens	Unigene	Hs.547861	ILMN_109667	HS.547861	Hs.547861		Hs.547861		34535092	AK127956			ILMN_1865361	0004810519	S	2301	CTGGATACACGAGCTCTGCGACAGGAAGGCAAGCATAAGGCTGTCATGCC	1	+	232918156-232918205		Homo sapiens cDNA FLJ46067 fis, clone TESOP2002110					
Homo sapiens	RefSeq	NM_052844.3	ILMN_25161	WDR34	NM_052844.3	NM_052844.3		89891	66267729	NM_052844.3	WDR34	NP_443076.2	ILMN_1685928	0006200195	S	1481	GCTGCCTCTGGGAAAGGTGACGTGCAGCTGTTTGATCTCCAGAAAAGCTC	9	-	131396227-131396261:131396505-131396519	9q34.11b	Homo sapiens WD repeat domain 34 (WDR34), mRNA.				MGC20486; bA216B9.3; RP11-216B9.5	MGC20486; bA216B9.3; RP11-216B9.5
Homo sapiens	RefSeq	NM_001006606.1	ILMN_3618	LOC388882	NM_001006606.1	NM_001006606.1		388882	54633327	NM_001006606.1	LOC388882	NP_001006607.1	ILMN_1683149	0006020358	S	1195	ACCTCATCCACGTCTGGAGACTTCATCCGCGACTGGGGGCTTCATCCATG	22	-	22134606-22134655	22q11.23a	Homo sapiens hypothetical LOC388882 (LOC388882), mRNA.					
Homo sapiens	RefSeq	XM_940790.1	ILMN_40186	LOC651609	XM_940790.1	XM_940790.1		651609	88987245	XM_940790.1	LOC651609	XP_945883.1	ILMN_1763216	0004260382	S	319	CACGCGGCCCATCGCACCAGCGCTCACAAGATACCACTAAAGTACGCACT					PREDICTED: Homo sapiens hypothetical protein LOC651609 (LOC651609), mRNA.					
Homo sapiens	RefSeq	NM_002836.2	ILMN_8330	PTPRA	NM_002836.2	NM_002836.2		5786	18450367	NM_002836.2	PTPRA	NP_002827.1	ILMN_1723156	0002360246	I	143	CGAGGAGATTTTTTCATGACCCTTCGGAATCAGCCCATGGCCCTCAGTTT	20	+	2793049-2793098	20p13c	Homo sapiens protein tyrosine phosphatase, receptor type, A (PTPRA), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2169617] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5001] [pmid 2169617] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HPTPalpha; RPTPA; LRP; HLPR; PTPRL2; R-PTP-alpha; HPTPA; PTPA; HEPTP	HPTPalpha; RPTPA; LRP; HLPR; PTPRL2; R-PTP-alpha; HPTPA; PTPA; HEPTP
Homo sapiens	RefSeq	XM_933749.1	ILMN_39403	MYO5B	XM_933749.1	XM_933749.1		4645	89047146	XM_933749.1	MYO5B	XP_938842.1	ILMN_1747314	0002140088	A	3787	TCCATGAATTGGAAGTAGAACAGCCTGCCTTCACCCTCTTTTACTCAACC	18	-	45605383-45605432	18q21.1f-q21.1g	PREDICTED: Homo sapiens myosin VB, transcript variant 3 (MYO5B), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_052849.2	ILMN_24282	C15ORF57	NM_052849.2	NM_052849.2		90416	33086946	NM_052849.2	C15orf57	NP_443081.1	ILMN_1811264	0005960014	S	1496	GCATGGCTTCTCCTCCAACTTCCTCCTGCACTTAAAAAGGGCCAGGTTCC	15	-	40845457-40845506	15q15.1b	Homo sapiens chromosome 15 open reading frame 57 (C15orf57), transcript variant 2, mRNA.				MGC20481; FLJ25915	MGC20481; FLJ25915
Homo sapiens	RefSeq	XM_930030.1	ILMN_39139	LOC152084	XM_930030.1	XM_930030.1		152084	88965901	XM_930030.1	LOC152084	XP_935123.1	ILMN_1802482	0001410722	A	488	GTGCTTTTGCTGATGTCTGTAAGAACTCTGTCTAAGCCGGTCAGAAGGAT	3	+	158124981-158124993:158124994-158125030	3q25.31b	PREDICTED: Homo sapiens hypothetical protein LOC152084 (LOC152084), mRNA.					
Homo sapiens	RefSeq	XM_001726297.1	ILMN_349769	LOC100129413	XM_001726297.1	XM_001726297.1		100129413	169188532	XM_001726297.1	LOC100129413	XP_001726349.1	ILMN_3270043	0005290112	M	324	CGGGCATGTATAGACTCCCATCAAGGCACACTGACCCTGAAAAATGGCTG	10	+	119789837-119789843:119794777-119794819	10q26.11b	PREDICTED: Homo sapiens hypothetical LOC100129413 (LOC100129413), mRNA.					
Homo sapiens	Unigene	Hs.61151	ILMN_73252	HS.61151	Hs.61151		Hs.61151		27878712	BX111977			ILMN_1916822	0005360491	S	452	GTCCTCTAAGGTAGACTGCTGGCCTCTCTGTCACGCCCCCGGAAACTGAA	10	+	8165961-8166010		BX111977 Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone IMAGp998E15839, mRNA sequence					
Homo sapiens	RefSeq	NM_001731.1	ILMN_18038	BTG1	NM_001731.1	NM_001731.1		694	4502472	NM_001731.1	BTG1	NP_001722.1	ILMN_1775743	0004730369	S	1438	GACCCTTAAAAAGACACTGTCTCAACTGTGGTGTTAGCACCAGCCAGCTC	12	-	91061324-91061373	12q21.33d	Homo sapiens B-cell translocation gene 1, anti-proliferative (BTG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9820826] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11420681] [evidence IMP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11420681] [evidence IMP]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 1373383] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 15033446] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 15033446] [evidence NAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 9690562] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11420681] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of endothelial cell differentiation [goid 45603] [pmid 15033446] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45663] [pmid 15033446] [evidence NAS]; Any process that activates or increases angiogenesis [goid 45766] [pmid 15033446] [evidence IMP]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 11420681] [evidence NAS]; Interacting selectively with a kinase, any enzyme that catalyzes the transfer of a phosphate group [goid 19900] [pmid 9820826] [evidence NAS]		
Homo sapiens	RefSeq	NM_018571.4	ILMN_24336	STRADB	NM_018571.5	NM_018571.5		55437	130979227	NM_018571.5	STRADB	NP_061041.2	ILMN_1701386	0002940075	S	1941	GCTGTCCCTTGGGAATGGGCCCTCAGAGGACAGTGCTTCCAAGTACATCT	2	+	202053462-202053511	2q33.1f	Homo sapiens STE20-related kinase adaptor beta (STRADB), mRNA.				ILPIPA; ILPIP; PAPK; MGC102916; CALS-21; PRO1038	ILPIPA; ILPIP; PAPK; MGC102916; CALS-21; PRO1038
Homo sapiens	RefSeq	NM_012167.1	ILMN_25889	FBXO11	NM_018693.2	NM_018693.2		80204	30089923	NM_018693.2	FBXO11	NP_061163.2	ILMN_1678404	0005080632	A	1807	GCTGGAGTCTGGGTGACAACTGGCAGCACTCCAGTACTGAGAAGAAACCG	2	-	48046113-48046162	2p16.3d	Homo sapiens F-box protein 11 (FBXO11), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531037] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16487488] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16487488] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 16487488] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10531037] [evidence NAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17098746] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [pmid 16487488] [evidence IDA]; Catalysis of the transfer of a methyl group to the carbon atom of an arginine residue in a protein [goid 35244] [pmid 16487488] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ12673; PRMT9; UG063H01; MGC44383; FBX11; VIT1	FLJ12673; PRMT9; UG063H01; MGC44383; FBX11; VIT1
Homo sapiens	RefSeq	NM_018693.2	ILMN_25889	FBXO11	NM_018693.2	NM_018693.2		80204	30089923	NM_018693.2	FBXO11	NP_061163.2	ILMN_1733164	0000290037	I	2358	CAATACTTTTCCTTTTGTAGCCACTTTGAGTCTGCAGTTGTCAGTAAGCC	2	-	48040147-48040196	2p16.3d	Homo sapiens F-box protein 11 (FBXO11), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531037] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16487488] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16487488] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 16487488] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10531037] [evidence NAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17098746] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [pmid 16487488] [evidence IDA]; Catalysis of the transfer of a methyl group to the carbon atom of an arginine residue in a protein [goid 35244] [pmid 16487488] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ12673; PRMT9; UG063H01; MGC44383; FBX11; VIT1	FLJ12673; PRMT9; UG063H01; MGC44383; FBX11; VIT1
Homo sapiens	RefSeq	XM_926409.1	ILMN_39472	LOC643040	XM_926409.1	XM_926409.1		643040	88978294	XM_926409.1	LOC643040	XP_931502.1	ILMN_1735127	0002710441	S	247	TCGCTCGGTCTGATACCAAGGAGGAAGGACACCCTGTTGTGGGCTCGCCC	4	+	179295409-179295458		PREDICTED: Homo sapiens hypothetical protein LOC643040 (LOC643040), mRNA.					
Homo sapiens	RefSeq	NM_001566.1	ILMN_19517	INPP4A	NM_001566.1	NM_001566.1		3631	4504704	NM_001566.1	INPP4A	NP_001557.1	ILMN_1655283	0006420035	I	2983	GGAACACGGGAGGTAGTCACCCAGAAAAACTTGAGCGGCCTGGTGCCCAT	2	+	98564602-98564651	2q11.2c	Homo sapiens inositol polyphosphate-4-phosphatase, type I, 107kDa (INPP4A), transcript variant b, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7608176] [evidence TAS]	Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 16316] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 34597] [evidence IEA]	INPP4	INPP4
Homo sapiens	RefSeq	NM_006810.1	ILMN_14191	PDIA5	NM_006810.2	NM_006810.2		10954	142361691	NM_006810.2	PDIA5	NP_006801.1	ILMN_1695763	0003170491	S	1310	GGTCATGTTCTACGCCCCTTGGTGCCCACACTGTAAGAAGGTCATTCCGC	3	+	124351891-124351901:124356508-124356546	3q21.1b	Homo sapiens protein disulfide isomerase family A, member 5 (PDIA5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 7556671] [evidence TAS]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 7556671] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence ISS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 7556671] [evidence TAS]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [pmid 7556671] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [pmid 7556671] [evidence TAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FLJ30401; PDIR	FLJ30401; PDIR
Homo sapiens	RefSeq	NM_002568.3	ILMN_173094	PABPC1	NM_002568.3	NM_002568.3		26986	56676313	NM_002568.3	PABPC1	NP_002559.2	ILMN_2136133	0003060040	S	2547	GAACCTTATGTACCGAGCAAATGCCAGGTCTAGCAAACATAATGCTAGTC	8	-	101784583-101784632	8q22.3a	Homo sapiens poly(A) binding protein, cytoplasmic 1 (PABPC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9582337] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]	The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [pmid 2885805] [evidence TAS]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [pmid 11997512] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 15663938] [evidence IPI]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [pmid 2885805] [evidence TAS]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [pmid 11997512] [evidence TAS]	PABP1; PABPL1; PABPC2; PAB1; PABP	PABP1; PABPL1; PABPC2; PAB1; PABP
Homo sapiens	RefSeq	NM_000131.2	ILMN_164898	F7	NM_000131.3	NM_000131.3		2155	116805320	NM_000131.3	F7	NP_000122.1	ILMN_1740559	0000780100	A	2387	GCCGGGCTGCACAGACTATTCCCCACCTGCTTCCCAGCTTCACAATAAAC	13	+	112822258-112822307	13q34c	Homo sapiens coagulation factor VII (serum prothrombin conversion accelerator) (F7), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8639673] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8598903] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3527261] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3037537] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8598903] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3527261] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2271516] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A pathway of blood coagulation in which the earlier stages of the cascade are bypassed and the activation of factor X to factor Xa is effected by the combination of factor VIIa + thromboplastin; this second pathway occurs when tissue extracts are present in optimal amounts and is much more rapid than the intrinsic pathway [goid 7598] [pmid 7598447] [evidence EXP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 3037537] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18267072] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	NM_000131.3	ILMN_164898	F7	NM_000131.3	NM_000131.3		2155	116805320	NM_000131.3	F7	NP_000122.1	ILMN_2358265	0003190280	A	3001	ACCAGCAACCCACCTCGGGGGCACTCAGGCATCATCTACTTCAGAGCAGA	13	+	112822872-112822921	13q34c	Homo sapiens coagulation factor VII (serum prothrombin conversion accelerator) (F7), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8639673] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8598903] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3527261] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3037537] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8598903] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3527261] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2271516] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A pathway of blood coagulation in which the earlier stages of the cascade are bypassed and the activation of factor X to factor Xa is effected by the combination of factor VIIa + thromboplastin; this second pathway occurs when tissue extracts are present in optimal amounts and is much more rapid than the intrinsic pathway [goid 7598] [pmid 7598447] [evidence EXP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 3037537] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18267072] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	NM_000131.3	ILMN_164898	F7	NM_000131.3	NM_000131.3		2155	116805320	NM_000131.3	F7	NP_000122.1	ILMN_2267025	0006650170	I	127	AAGGCCTCAGGAGGAGAAACACGGGACATGCCGTGGAAGCCGGGGCCTCA	13	+	112809171-112809220	13q34c	Homo sapiens coagulation factor VII (serum prothrombin conversion accelerator) (F7), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8639673] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8598903] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3527261] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3037537] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8598903] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3527261] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2271516] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A pathway of blood coagulation in which the earlier stages of the cascade are bypassed and the activation of factor X to factor Xa is effected by the combination of factor VIIa + thromboplastin; this second pathway occurs when tissue extracts are present in optimal amounts and is much more rapid than the intrinsic pathway [goid 7598] [pmid 7598447] [evidence EXP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 3037537] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18267072] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	XM_929213.1	ILMN_36286	LOC643799	XM_929213.1	XM_929213.1		643799	88943819	XM_929213.1	LOC643799	XP_934306.1	ILMN_1664336	0005310176	S	181	AGTGACAGCCAGGCAGGGCTGTCCATCATTAAGCAGTGCACGGTGACGCA	1	-	226527479-226527528		PREDICTED: Homo sapiens hypothetical protein LOC643799 (LOC643799), mRNA.					
Homo sapiens	RefSeq	XM_939236.1	ILMN_35338	LOC650155	XM_939236.2	XM_939236.2		650155	113422037	XM_939236.2	LOC650155	XP_944329.1	ILMN_1658978	0004250341	S	2296	CGTGACCAGGAGATGCCTGAAGCTTTGGAGTTTAACCTTTCTGCCAATCC					PREDICTED: Homo sapiens similar to hCG1812818 (LOC650155), mRNA.					
Homo sapiens	RefSeq	NM_015636.3	ILMN_18552	EIF2B4	NM_015636.3	NM_015636.3		8890	78000155	NM_015636.3	EIF2B4	NP_056451.3	ILMN_2356672	0006370494	A	1554	GCGCTGGCTAACTGGCAGAACCACGCATCCCTACGGTTGTTGAATCTAGT	2	-	27587375-27587424	2p23.3a	Homo sapiens eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa (EIF2B4), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 15060152] [evidence IDA]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [pmid 15507143] [evidence IMP]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [pmid 16289705] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [pmid 12556349] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 12499492] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence ISS]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [pmid 15217090] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 14566705] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence ISS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 51716] [pmid 8626696] [evidence IDA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 16289705] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 11323413] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 15054402] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15060152] [evidence IPI]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	EIF-2B; DKFZp586J0119; EIF2Bdelta; EIF2B	EIF-2B; DKFZp586J0119; EIF2Bdelta; EIF2B
Homo sapiens	RefSeq	NM_000063.3	ILMN_23604	C2	NM_000063.3	NM_000063.3		717	20631970	NM_000063.3	C2	NP_000054.2	ILMN_1710740	0000670594	S	2328	GAATCTGCCGCCCCTCCATCTTCTACCTCTGAATGGCCACCCTTAGACCC	6	+	32021146-32021195	6p21.32b	Homo sapiens complement component 2 (C2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12878586] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 15199963] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 6019133] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8621452] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [pmid 162484] [evidence EXP]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [pmid 8621452] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	CO2; DKFZp779M0311	CO2; DKFZp779M0311
Homo sapiens	RefSeq	XM_172860.4	ILMN_41209	LOC255649	XM_172860.4	XM_172860.4		255649	89034017	XM_172860.4	LOC255649	XP_172860.4	ILMN_1764244	0006130110	S	436	CCAGTGGGACAATATGTGGAGAGGGAAGACGCAATAACTGCAATGTGCTC	11	+	59529215-59529245:59547929-59547947	11q12.1d	PREDICTED: Homo sapiens hypothetical LOC255649 (LOC255649), mRNA.					
Homo sapiens	RefSeq	NM_003942.2	ILMN_19949	RPS6KA4	NM_001006944.1	NM_001006944.1		8986	55743137	NM_001006944.1	RPS6KA4	NP_001006945.1	ILMN_1756204	0006060433	A	2861	GGCCCTGGGGGACCCTCTGAAGCATTTCTGCCTCACTTTATGTCATCTGC	11	+	63896005-63896054	11q13.1b	Homo sapiens ribosomal protein S6 kinase, 90kDa, polypeptide 4 (RPS6KA4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11035004] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9792677] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9792677] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9792677] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 9792677] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the phosphorylation of ribosomal protein S6 [goid 4711] [pmid 11035004] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9792677] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9792677] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with mitogen-activated protein kinase p38, an enzyme that catalyzes the transfer of phosphate from ATP to hydroxyl side chains on proteins in response to mitogen activation [goid 48273] [pmid 11035004] [evidence IGI]; Interacting selectively with mitogen-activated protein kinase p38, an enzyme that catalyzes the transfer of phosphate from ATP to hydroxyl side chains on proteins in response to mitogen activation [goid 48273] [evidence ISS]	RSK-B; MSK2	MSK2; RSK-B
Homo sapiens	RefSeq	NM_000741.2	ILMN_24223	CHRM4	NM_000741.2	NM_000741.2		1132	52426747	NM_000741.2	CHRM4	NP_000732.2	ILMN_1660882	0004780609	S	1361	CTCTGTGCAACGCCACCTTTAAAAAGACCTTCCGGCACCTGCTGCTGTGC	11	-	46406697-46406746	11p11.2c	Homo sapiens cholinergic receptor, muscarinic 4 (CHRM4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3443095] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3037705] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [pmid 3443095] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2739737] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4981] [pmid 9603968] [evidence TAS]	HM4	HM4
Homo sapiens	RefSeq	XM_001720206.1	ILMN_350984	LOC644079	XM_001720206.1	XM_001720206.1		644079	169215539	XM_001720206.1	LOC644079	XP_001720258.1	ILMN_3294186	0000610364	M	61	GGGAGAGGTCTCCGGCTTGTCGTAACCCAGGGGAGTCACCCACTGCCTCC	22	-	22987456-22987505	22q11.23b	PREDICTED: Homo sapiens hypothetical LOC644079 (LOC644079), mRNA.					
Homo sapiens	RefSeq	NM_178025.1	ILMN_172918	GGT7	NM_178026.2	NM_178026.2		2686	109148538	NM_178026.2	GGT7	NP_821158.2	ILMN_1737036	0007150537	A	631	ACGAAATGAGAGCCACCTAATTGATTTCCGGGAGTCCGCACCAGGGGCCC	20	-	33449285-33449334	20q11.22b	Homo sapiens gamma-glutamyltransferase 7 (GGT7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]	Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GGTL5; D20S101; dJ18C9.2	GGTL5; D20S101; dJ18C9.2
Homo sapiens	RefSeq	XM_939090.1	ILMN_138751	CXORF48	XM_939090.1	XM_939090.1		54967	89061069	XM_939090.1	CXorf48	XP_944183.1	ILMN_1808984	0002140725	I	759	AATCAGCTTAGCGGTCCAGACTGTCCTCCTCCACTCCTGCTCCACCCTAG				Xq26.3a	PREDICTED: Homo sapiens chromosome X open reading frame 48 (CXorf48), mRNA.					
Homo sapiens	RefSeq	NM_152237.1	ILMN_12557	GAS2L1	NM_152237.1	NM_152237.1		10634	23065528	NM_152237.1	GAS2L1	NP_689423.1	ILMN_1792777	0006620431	I	1540	CCGTCCACCAGCCACATACCCTGCTGTTCCTCTCCCTGCCTGTTCTGCAT	22	+	28037352-28037401	22q12.2a	Homo sapiens growth arrest-specific 2 like 1 (GAS2L1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		MGC17243; GAR22	MGC17243; GAR22
Homo sapiens	RefSeq	NM_058184.1	ILMN_15559	C21ORF42	NM_058184.1	NM_058184.1		54072	17158012	NM_058184.1	C21orf42	NP_478064.1	ILMN_1668442	0000610537	S	1087	AAGACCAAGGCCACATTCCATTGACCAGAGCTCAGCCACGCGCCACACCT	21	-	25680343-25680392		Homo sapiens chromosome 21 open reading frame 42 (C21orf42), mRNA.					
Homo sapiens	RefSeq	NM_207338.1	ILMN_17640	LCTL	NM_207338.2	NM_207338.2		197021	110681709	NM_207338.2	LCTL	NP_997221.2	ILMN_1763537	0004780347	S	1266	TCTGGGGTCTAAATGGCTATATTCTGTGCCATGGGGATTTAGGAGGCTCC	15	-	66845335-66845384	15q22.31c	Homo sapiens lactase-like (LCTL), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	KLG; KLPH; FLJ33279	KLG; KLPH; FLJ33279
Homo sapiens	RefSeq	XM_927073.1	ILMN_32203	LOC643792	XM_927073.1	XM_927073.1		643792	89029395	XM_927073.1	LOC643792	XP_932166.1	ILMN_1778223	0004590086	S	7	TACCTCTTCACACAGACAAAGATTTCCGCATATTTCGCAACTGGCTCCTC	9	-	47104111-47104142:47105256-47105273	9p11.1b	PREDICTED: Homo sapiens similar to Contactin-associated protein-like 3 precursor (Cell recognition molecule Caspr3) (LOC643792), mRNA.					
Homo sapiens	RefSeq	XM_932872.1	ILMN_41922	LOC645396	XM_932872.1	XM_932872.1		645396	89040501	XM_932872.1	LOC645396	XP_937965.1	ILMN_1672846	0005090468	S	1	CAGACAACGTCTATGTGTAAAGGCGACCACCTTATTAGGTCTCCTGCAGC	16	-	70054107-70054156		PREDICTED: Homo sapiens hypothetical protein LOC645396 (LOC645396), mRNA.					
Homo sapiens	RefSeq	NM_001004322.1	ILMN_13488	FLJ38717	NM_001004322.1	NM_001004322.1		401261	51972215	NM_001004322.1	FLJ38717	NP_001004322.1	ILMN_1771320	0000670136	S	2559	TTGCAGGGGCCCGAGACCCCACCATTGCACTCCAGTCCGGGAAACAAGAA	6	+	42861220-42861269	6p21.1e	Homo sapiens FLJ38717 protein (FLJ38717), mRNA.				FLJ40915	FLJ40915
Homo sapiens	RefSeq	NM_016618.1	ILMN_25337	KRCC1	NM_016618.1	NM_016618.1		51315	7706155	NM_016618.1	KRCC1	NP_057702.1	ILMN_2091375	0005340703	S	1110	AGGAACAAGGCCAAGAAAGGACAGAGGAGGAAATGCTTTGGGACCAGTCT	2	-	88327317-88327366	2p11.2d	Homo sapiens lysine-rich coiled-coil 1 (KRCC1), mRNA.				FLJ22333; CHBP2	FLJ22333; CHBP2
Homo sapiens	RefSeq	NM_016618.1	ILMN_25337	KRCC1	NM_016618.1	NM_016618.1		51315	7706155	NM_016618.1	KRCC1	NP_057702.1	ILMN_1745620	0002370538	S	873	GGAAAAGGCACCCAGAGGAAGGCAGAGAAAAATCAGAGGAGGAGCGGTCT	2	-	88327554-88327603	2p11.2d	Homo sapiens lysine-rich coiled-coil 1 (KRCC1), mRNA.				FLJ22333; CHBP2	FLJ22333; CHBP2
Homo sapiens	RefSeq	NM_004240.2	ILMN_23905	TRIP10	NM_004240.2	NM_004240.2		9322	42516568	NM_004240.2	TRIP10	NP_004231.1	ILMN_2161746	0000430431	S	1759	GGAGCCCCAGGACCTATGCACTTTATTTCTGACCCCGTGGCTTCGGCTGA	19	+	6702277-6702326	19p13.3a	Homo sapiens thyroid hormone receptor interactor 10 (TRIP10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9210375] [evidence NAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9210375] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 9210375] [evidence NAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17512409] [evidence IPI]	CIP4; STOT; HSTP; STP	CIP4; HSTP; STP; STOT
Homo sapiens	RefSeq	NM_033642.1	ILMN_6609	FGF13	NM_033642.1	NM_033642.1		2258	16306542	NM_033642.1	FGF13	NP_378668.1	ILMN_1653826	0001090056	I	24	CTCTGTGTCTGCTCCAAATGTAGACAGCAATTGTCTGGGTAGGACCAGCT	X	-	137649108-137649157	Xq26.3d	Homo sapiens fibroblast growth factor 13 (FGF13), transcript variant 1B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8790420] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12244047] [evidence IPI]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 12244047] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8790420] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8790420] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8790420] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244047] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8790420] [evidence TAS]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [pmid 12244047] [evidence IGI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	FGF2; FHF2	FGF2; FHF2
Homo sapiens	RefSeq	NM_002221.2	ILMN_12468	ITPKB	NM_002221.2	NM_002221.2		3707	38569399	NM_002221.2	ITPKB	NP_002212.2	ILMN_1700432	0004830239	S	5542	CCCACTTGGTAGAAAGAGCCCAGAAGCAGCCCTGGCCCTGTAAGATGGAC	1	-	224886280-224886329	1q42.12d	Homo sapiens inositol 1,4,5-trisphosphate 3-kinase B (ITPKB), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1654894] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [pmid 1654894] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	IP3K-B; IP3KB; IP3K; PIG37	IP3K-B; IP3KB; IP3K; PIG37
Homo sapiens	RefSeq	NM_016077.3	ILMN_20162	PTRH2	NM_016077.3	NM_016077.3		51651	62865877	NM_016077.3	PTRH2	NP_057161.1	ILMN_2311548	0004900575	A	459	GGCCAGCCCAAGGTGGTGGTCAAAGCTCCTGATGAAGAAACCCTGATTGC	17	-	57774956-57775005	17q23.1a	Homo sapiens peptidyl-tRNA hydrolase 2 (PTRH2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the reaction: N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA [goid 4045] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CGI-147; FLJ32471; PTH2; BIT1	CGI-147; FLJ32471; PTH2; BIT1
Homo sapiens	RefSeq	XM_926628.1	ILMN_43317	LOC643266	XM_926628.1	XM_926628.1		643266	89059043	XM_926628.1	LOC643266	XP_931721.1	ILMN_1812364	0003140221	S	3080	TGCCCACAGCTGCCACTGCACACCCAGATCGCTGGACTGAACCCATGGTT	22	+	47298402-47298428:47300109-47300131		PREDICTED: Homo sapiens hypothetical protein LOC643266 (LOC643266), mRNA.					
Homo sapiens	RefSeq	NM_001030288.1	ILMN_18556	SPN	NM_001030288.1	NM_001030288.1		6693	71979936	NM_001030288.1	SPN	NP_001025459.1	ILMN_1801040	0000010358	A	6468	AGTGGTGTGCGCCTGTGGTACCAGCTACTCAAGAGGCGAAGGCAGGGAAG	16	+	29588882-29588931	16p11.2d	Homo sapiens sialophorin (SPN), transcript variant 1, mRNA.	A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10899905] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2023632] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan [goid 1562] [evidence IEA]; Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response [goid 1808] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10753822] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 1683685] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 10753822] [evidence TAS]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 10753822] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [pmid 10899905] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 10899905] [evidence IDA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IEA]; Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism [goid 50688] [evidence IEA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 1683685] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any part of a bacterial cell [goid 8367] [pmid 10899905] [evidence IDA]	GPL115; CD43; LSN	GPL115; CD43; LSN
Homo sapiens	RefSeq	NM_001030288.1	ILMN_18556	SPN	NM_001030288.1	NM_001030288.1		6693	71979936	NM_001030288.1	SPN	NP_001025459.1	ILMN_1658017	0004220373	I	14	CCCTCCCTAGCATCACCACTTCCATCCCATTCCTCAGCCAAGAGCCAGGA	16	+	29581814-29581863	16p11.2d	Homo sapiens sialophorin (SPN), transcript variant 1, mRNA.	A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10899905] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2023632] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a protozoan [goid 1562] [evidence IEA]; Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response [goid 1808] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10753822] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 1683685] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 10753822] [evidence TAS]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 10753822] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [pmid 10899905] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 10899905] [evidence IDA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IEA]; Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism [goid 50688] [evidence IEA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 1683685] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any part of a bacterial cell [goid 8367] [pmid 10899905] [evidence IDA]	GPL115; CD43; LSN	GPL115; CD43; LSN
Homo sapiens	RefSeq	XM_935723.1	ILMN_46508	LOC641957	XM_935723.1	XM_935723.1		641957	89026852	XM_935723.1	LOC641957	XP_940816.1	ILMN_1686759	0006960670	S	15	GCTGTTGGATGACTCCAAAAGTGGTTCTTTGACAAAGAAACCAATGGGGA					PREDICTED: Homo sapiens hypothetical protein LOC641957 (LOC641957), mRNA.					
Homo sapiens	RefSeq	XM_930130.1	ILMN_33174	LOC644962	XM_930130.1	XM_930130.1		644962	88976635	XM_930130.1	LOC644962	XP_935223.1	ILMN_1689136	0001430164	S	188	CCATGGAAGCTTGGCACGCAGGCCGTGGAAACAGACCCACGCCCCCGAGA	4	-	141783441-141783490	4q31.21a	PREDICTED: Homo sapiens similar to zinc finger protein 469 (LOC644962), mRNA.					
Homo sapiens	RefSeq	NR_024281.1	ILMN_371024	LOC157627	NR_024281.1	NR_024281.1		157627	210147410	NR_024281.1	LOC157627		ILMN_3242710	0004850546	S	2576	GATGGGCTCATATGCACCACTGCCATCACAGTCCCCATCGTGATGCAAGC	8	-	9758214-9758263		Homo sapiens hypothetical LOC157627 (LOC157627), non-coding RNA.					
Homo sapiens	RefSeq	NM_078471.3	ILMN_11210	MYO18A	NM_078471.3	NM_078471.3		399687	42794777	NM_078471.3	MYO18A	NP_510880.2	ILMN_2330806	0001170730	A	5835	AAGGAGGCCGAGGCGAGCCGCAAGAAGCACGAACTGGAGATGGATCTAGA	17	-	27413581-27413595:27413954-27413988	17q11.2b	Homo sapiens myosin XVIIIA (MYO18A), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9918798] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]	KIAA0216; DKFZp686L0243; MYSPDZ	KIAA0216; DKFZp686L0243; MYSPDZ
Homo sapiens	RefSeq	NM_203318.1	ILMN_11210	MYO18A	NM_078471.3	NM_078471.3		399687	42794777	NM_078471.3	MYO18A	NP_510880.2	ILMN_1780560	0000270093	A	7538	CCCGATGTATGGAAATAAAGGCCCTTTTCCTCCTGGCTGCGCCAGTAAAA	17	-	24531529-24531533:27400528-27400572	17q11.2b	Homo sapiens myosin XVIIIA (MYO18A), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9918798] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]	KIAA0216; DKFZp686L0243; MYSPDZ	KIAA0216; DKFZp686L0243; MYSPDZ
Homo sapiens	RefSeq	XM_930958.1	ILMN_37665	LOC642622	XM_930958.1	XM_930958.1		642622	89031649	XM_930958.1	LOC642622	XP_936051.1	ILMN_2136989	0000360441	S	121	CCACTGCCCGCGATGACACCTTCCTGTGCACGTTACCCCTTCCTGTGCAC	10	-	126907095-126907144	10q26.13e	PREDICTED: Homo sapiens hypothetical LOC642622 (LOC642622), mRNA.					
Homo sapiens	RefSeq	XM_935579.1	ILMN_44943	LOC641834	XM_935579.1	XM_935579.1		641834	89027372	XM_935579.1	LOC641834	XP_940672.1	ILMN_1668334	0002600709	S	3	GATTGCTGAAATTACCATAGCTACCCCTACCTTCAGCGACTACCACCCTG					PREDICTED: Homo sapiens hypothetical protein LOC641834 (LOC641834), mRNA.					
Homo sapiens	RefSeq	NM_003601.2	ILMN_28255	SMARCA5	NM_003601.2	NM_003601.2		8467	21071057	NM_003601.2	SMARCA5	NP_003592.2	ILMN_1713163	0003780465	S	3140	AGCTCCAGGACATAGAGAAGATTATGGCTCAGATTGAAAGGGGAGAGGCG	4	+	144468562-144468611	4q31.21c	Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 (SMARCA5), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [pmid 12972596] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12972596] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9730600] [evidence TAS]; A chromatin remodeling complex that mediates nucleosome deposition and generates regularly spaced nucleosome arrays. In humans, the complex is composed of the ATPase hSNF2H and the HBXAP protein (RSF-1) [goid 31213] [pmid 9836642] [evidence IPI]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 12972596] [evidence IDA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [pmid 9836642] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9730600] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another [goid 16584] [pmid 9836642] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors [goid 43044] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 12972596] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9730600] [evidence TAS]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [pmid 9730600] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12972596] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12972596] [evidence IDA]; Interacting selectively with a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 31491] [evidence IEA]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [pmid 12972596] [evidence IDA]	hSNF2H; ISWI; SNF2H; WCRF135; hISWI	hSNF2H; SNF2H; WCRF135; ISWI; hISWI
Homo sapiens	RefSeq	NM_015844.1	ILMN_14073	MBD1	NM_015844.1	NM_015844.1		4152	7710134	NM_015844.1	MBD1	NP_056669.1	ILMN_2352580	0002340445	A	1916	GGATGGCCTGGAACCCATGTCAGTCTCTCACCACCTCCAGCTTCGATGAT	18	-	46050042-46050091	18q21.1g	Homo sapiens methyl-CpG binding domain protein 1 (MBD1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10454587] [evidence NAS]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9774669] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10454587] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10866667] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10866667] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12711603] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16432238] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12711603] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16432238] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a methylated cytosine/guanine dinucleotide [goid 8327] [pmid 10454587] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PCM1; RFT; CXXC3	PCM1; RFT; CXXC3
Homo sapiens	RefSeq	NR_029861.1	ILMN_388170	MIR376C	NR_029861.1	NR_029861.1		442913	262206198	NR_029861.1	MIR376C		ILMN_3310885	0006620288	S	14	CCTTCTATGTTTATGTTATTTATGGTTAAACATAGAGGAAATTCCACGTT				14q32.31a	Homo sapiens microRNA 376c (MIR376C), microRNA.					
Homo sapiens	RefSeq	NM_001004299.1	ILMN_12572	FLJ43980	NM_001004299.1	NM_001004299.1		124149	51972179	NM_001004299.1	FLJ43980	NP_001004299.1	ILMN_1741157	0002350682	S	3432	GGAGAGCGACTTGTCAAAGGAAGACAAGAATGGAGGACACTTTCTGGAAC	16	-	45065711-45065742:45067179-45067196	16q11.2i	Homo sapiens FLJ43980 protein (FLJ43980), mRNA.				DKFZp781D1722; MGC87661	MGC87661; DKFZp781D1722
Homo sapiens	RefSeq	NM_006568.2	ILMN_6033	CGRRF1	NM_006568.2	NM_006568.2		10668	50726998	NM_006568.2	CGRRF1	NP_006559.1	ILMN_1681008	0001940561	S	922	CCAGAATGGGACTGTGAACTGGGTACTCTTACCATGCAGACACACATGCC	14	+	54074683-54074732	14q22.2b	Homo sapiens cell growth regulator with ring finger domain 1 (CGRRF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 8968090] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8968090] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF197; CGR19	RNF197; CGR19
Homo sapiens	RefSeq	XM_937862.1	ILMN_31088	LOC644962	XM_937862.2	XM_937862.2		644962	113416279	XM_937862.2	LOC644962	XP_942955.1	ILMN_1727523	0003850209	S	194	CCATGGAAGCTTGGCACGCAGGCCGTGGAAACAGACCCACGCCCCCGAGC				4q31.21a	PREDICTED: Homo sapiens similar to zinc finger protein 469 (LOC644962), mRNA.					
Homo sapiens	RefSeq	XM_938356.1	ILMN_34777	LOC649292	XM_938356.1	XM_938356.1		649292	89028515	XM_938356.1	LOC649292	XP_943449.1	ILMN_1689897	0004830482	S	485	GTCCAGTGCCTGGTTTGGGGAATGTTCGTGGGATATGTTCCAAAGGACCG					PREDICTED: Homo sapiens similar to Beta-defensin 131 precursor (Beta-defensin 31) (DEFB-31) (LOC649292), mRNA.					
Homo sapiens	RefSeq	NM_006735.3	ILMN_15892	HOXA2	NM_006735.3	NM_006735.3		3199	37596298	NM_006735.3	HOXA2	NP_006726.1	ILMN_1799836	0004260692	S	1280	GCTTTCAGATGCAGTTTCACCCAGTTTGCCAGGTTCCCTCGACAGTCCCG	7	-	27140421-27140470	7p15.2a	Homo sapiens homeobox A2 (HOXA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IEA]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX1K	HOX1K
Homo sapiens	RefSeq	NM_006735.3	ILMN_15892	HOXA2	NM_006735.3	NM_006735.3		3199	37596298	NM_006735.3	HOXA2	NP_006726.1	ILMN_2107068	0002060471	S	1619	CCTAACTCAACAACCCTTTATGTGATTCCTGAGAGCAGTATGAGGCCTGC	7	-	27140082-27140131	7p15.2a	Homo sapiens homeobox A2 (HOXA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IEA]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX1K	HOX1K
Homo sapiens	RefSeq	NM_001119.3	ILMN_27892	ADD1	NM_176801.1	NM_176801.1		118	29826324	NM_176801.1	ADD1	NP_789771.1	ILMN_1759252	0005900685	A	3986	GGACACCGACTTGGGAGGACAGGTCCTGAATGTCCTTTCTCCAGTGTAAC	4	+	2900576-2900625	4p16.3a	Homo sapiens adducin 1 (alpha) (ADD1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10823823] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 1840603] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADDA; MGC44427; MGC3339	ADDA; MGC44427; MGC3339
Homo sapiens	RefSeq	NM_001080520.1	ILMN_183475	DRGX	NM_001080520.1	NM_001080520.1		644168	122937483	NM_001080520.1	DRGX	NP_001073989.1	ILMN_2245627	0004200465	I	748	GGCAGCCAGGAAAAGACCTCTCCCACCAAGGAACAGAGCGAGGCAGAGAA	10	-	50574170-50574219	10q11.23a	Homo sapiens dorsal root ganglia homeobox (DRGX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]; The series of events in which a chemical stimulus is received by a cell and converted into a molecular signal [goid 9593] [evidence IEA]; The series of events in which a temperature stimulus (hot or cold) is received and converted into a molecular signal [goid 16048] [evidence IEA]; The series of events required for an organism to receive a sensory mechanical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50954] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	DRG11; PRRXL1	DRG11; PRRXL1
Homo sapiens	RefSeq	XM_928363.1	ILMN_42574	LOC653605	XM_928363.1	XM_928363.1		653605	89057835	XM_928363.1	LOC653605	XP_933456.1	ILMN_1672854	0002140692	S	61	CACTCCTCGCTGCCCCAGAGTGACCAGAAAGAGTTGGCCGTTCACTACCC	20	-	25164798-25164821:25168588-25168613		PREDICTED: Homo sapiens similar to ectonucleoside triphosphate diphosphohydrolase 6 (putative function) (LOC653605), mRNA.					
Homo sapiens	Unigene	Hs.577000	ILMN_129181	HS.577000	Hs.577000		Hs.577000		83075625	DB341223			ILMN_1866563	0004890392	S	389	AGTTCTGATCTTCTTCATAATGCATGCTCTACATAAACCGCATGTGTATT	11	+	97940061-97940110		DB341223 TESTI4 Homo sapiens cDNA clone TESTI4035696 3, mRNA sequence					
Homo sapiens	RefSeq	NM_198904.1	ILMN_28262	GABRG2	NM_198904.1	NM_198904.1		2566	38788154	NM_198904.1	GABRG2	NP_944494.1	ILMN_1800270	0002120600	I	3783	AGCTGCTCCCTGTCTATGTATTTGGAAACCTTTTCACAAAGGGAATTGCC	5	+	161515018-161515067	5q34b	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, gamma 2 (GABRG2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2538761] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [pmid 2538761] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9892355] [evidence IPI]; Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity [goid 8503] [pmid 2538761] [evidence TAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	ECA2; GEFSP3; CAE2	ECA2; GEFSP3; CAE2
Homo sapiens	RefSeq	NM_019592.5	ILMN_3024	RNF20	NM_019592.5	NM_019592.5		56254	34878776	NM_019592.5	RNF20	NP_062538.5	ILMN_1710758	0002630619	S	3736	AGAGGTTGAGTCAGGACTGAGCTGGTGAAGAAATCTTGTGGGTATTCTGG	9	+	103365243-103365292	9q31.1b	Homo sapiens ring finger protein 20 (RNF20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BRE1A; MGC129667; MGC129668; FLJ20382; KIAA2779; FLJ11189	BRE1A; MGC129667; MGC129668; FLJ20382; KIAA2779; FLJ11189
Homo sapiens	RefSeq	NM_001248.1	ILMN_6137	ENTPD3	NM_001248.1	NM_001248.1		956	4557424	NM_001248.1	ENTPD3	NP_001239.1	ILMN_1775114	0005080044	S	2211	CAGCCACAGCCAGGCTTCTGTCATACAGGTAGATCCCGAAGCACAGAGAC	3	+	40444549-40444598	3p22.1c	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 3 (ENTPD3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a nucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with diphosphate on its glycose moiety [goid 9134] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a nucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with triphosphate on its glycose moiety [goid 9143] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	CD39L3; HB6; NTPDase-3	CD39L3; HB6; NTPDase-3
Homo sapiens	RefSeq	NM_001248.1	ILMN_6137	ENTPD3	NM_001248.1	NM_001248.1		956	4557424	NM_001248.1	ENTPD3	NP_001239.1	ILMN_2087941	0004850504	S	2584	CCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTTGACTTTGGGG	3	+	40444922-40444971	3p22.1c	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 3 (ENTPD3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a nucleoside diphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with diphosphate on its glycose moiety [goid 9134] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a nucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with triphosphate on its glycose moiety [goid 9143] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	CD39L3; HB6; NTPDase-3	CD39L3; HB6; NTPDase-3
Homo sapiens	RefSeq	NM_007073.3	ILMN_25037	BVES	NM_007073.3	NM_007073.3		11149	59939903	NM_007073.3	BVES	NP_009004.2	ILMN_1676294	0006900682	I	27	TCGGCCCCACCGAGTGCCGGCTCCCGCGCTCTGCGGCGGCAAGCCCCTTG	6	-	105688156-105688156:105691161-105691209	6q21a	Homo sapiens blood vessel epicardial substance (BVES), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10441744] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 10441744] [evidence NAS]		POPDC1; POP1; HBVES; MGC42413	POPDC1; POP1; HBVES; MGC42413
Homo sapiens	RefSeq	NM_001005165.1	ILMN_23953	OR52E4	NM_001005165.1	NM_001005165.1		390081	52353251	NM_001005165.1	OR52E4	NP_001005165.1	ILMN_1734306	0005900458	S	824	TTCTTTTGGCTAACCTGTATGTGGTTGTCCCACCTGCCCTTAACCCTGTC	11	+	5862922-5862971	11p15.4c	Homo sapiens olfactory receptor, family 52, subfamily E, member 4 (OR52E4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-55	OR11-55
Homo sapiens	RefSeq	XM_942503.1	ILMN_173053	FAM69B	XM_001130258.1	XM_001130258.1		138311	113421256	XM_001130258.1	FAM69B	XP_001130258.1	ILMN_1757440	0003450114	A	1531	GATTCCAGCACCACAGACATGAGACCCCAGCTCGGAGCAAAGGCGGACAT				9q34.3e	PREDICTED: Homo sapiens family with sequence similarity 69, member B (FAM69B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_152421.2	ILMN_173053	FAM69B	XM_001130258.1	XM_001130258.1		138311	113421256	XM_001130258.1	FAM69B	XP_001130258.1	ILMN_1718446	0004290152	A	1367	AGAAGATCTCCAACACCAAGTACTCTTGATGGGGCAGTGAGGGGCCTGGC				9q34.3e	PREDICTED: Homo sapiens family with sequence similarity 69, member B (FAM69B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				pp6977; MGC20262; C9orf136
Homo sapiens	RefSeq	XM_001716940.1	ILMN_346930	CLDN24	XM_001716940.1	XM_001716940.1		100132463	169166930	XM_001716940.1	CLDN24	XP_001716992.1	ILMN_3289458	0003420246	M	613	CAAACTCAGTGTCCCTACCTGGAAGATGGGACAGCAGATCCTCAAGTGTA				4q35.1c	PREDICTED: Homo sapiens claudin-24-like (CLDN24), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Homo sapiens	RefSeq	XM_001716940.1	ILMN_346930	CLDN24	XM_001716940.1	XM_001716940.1		100132463	169166930	XM_001716940.1	CLDN24	XP_001716992.1	ILMN_3212962	0005340093	A	71	CCATTATTACAACTTATTTGCCACACTGGAAGAACCTCAACCTGGACTTA				4q35.1c	PREDICTED: Homo sapiens claudin-24-like (CLDN24), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Homo sapiens	RefSeq	NM_014276.2	ILMN_27196	RBPJL	NM_014276.2	NM_014276.2		11317	34577080	NM_014276.2	RBPJL	NP_055091.2	ILMN_1798870	0006550292	S	2414	ACTTCTCCCACAGGCCCAGCAGGACGCAGTCCTGAGGATCAGGGATTCTA	20	+	43379801-43379850	20q13.12b	Homo sapiens recombination signal binding protein for immunoglobulin kappa J region-like (RBPJL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9929984] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9929984] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SUHL; SUH; RBPSUHL; RBP-L	SUHL; SUH; RBPSUHL; RBP-L
Homo sapiens	RefSeq	NM_001033049.1	ILMN_30004	ADARB1	NM_001112.2	NM_001112.2		104	75709167	NM_001112.2	ADARB1	NP_001103.1	ILMN_1679797	0007330097	A	6758	TACACCACACGTTACAACTGCATGAGCTTCCTCTCGCACAAGACCAGCTG	21	+	45470779-45470828	21q22.3e	Homo sapiens adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) (ADARB1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8995285] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 9149227] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [pmid 9149227] [evidence IC ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9111310] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 8995285] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 8995285] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 9149227] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 9149227] [evidence IC ]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADAR2a; ADAR2; DRABA2; DRADA2; ADAR2a-L1; ADAR2a-L2; ADAR2g; ADAR2c; RED1; ADAR2a-L3; ADAR2b; ADAR2d	ADAR2a; ADAR2; DRABA2; DRADA2; ADAR2a-L1; ADAR2a-L2; ADAR2g; ADAR2c; RED1; ADAR2a-L3; ADAR2b; ADAR2d
Homo sapiens	RefSeq	NM_001112.2	ILMN_30004	ADARB1	NM_001112.2	NM_001112.2		104	75709167	NM_001112.2	ADARB1	NP_001103.1	ILMN_1697628	0002320228	I	5165	CCGTGAGACAGATCGGGGACCTTAGCACTTTAATCCCTCCCTTCTGAGCG	21	+	45469186-45469235	21q22.3e	Homo sapiens adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) (ADARB1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8995285] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 9149227] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [pmid 9149227] [evidence IC ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9111310] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 8995285] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 8995285] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 9149227] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 9149227] [evidence IC ]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADAR2a; ADAR2; DRABA2; DRADA2; ADAR2a-L1; ADAR2a-L2; ADAR2g; ADAR2c; RED1; ADAR2a-L3; ADAR2b; ADAR2d	ADAR2a; ADAR2; DRABA2; DRADA2; ADAR2a-L1; ADAR2a-L2; ADAR2g; ADAR2c; RED1; ADAR2a-L3; ADAR2b; ADAR2d
Homo sapiens	RefSeq	XR_037031.1	ILMN_336398	LOC100134816	XR_037031.1	XR_037031.1		100134816	169170486	XR_037031.1	LOC100134816		ILMN_3236760	0006130468	S	485	AGGTGGACCAAAGCATTCCACTCAGAAAGCAGCTGGTAAAGAGCTTACAG	7	-	64137977-64138026		PREDICTED: Homo sapiens misc_RNA (LOC100134816), miscRNA.					
Homo sapiens	RefSeq	NM_013356.1	ILMN_173943	SLC16A8	NM_013356.2	NM_013356.2		23539	114796625	NM_013356.2	SLC16A8	NP_037488.2	ILMN_1731165	0000580500	S	1769	TTGATCCCCTGGGTGTCTGGGAACTGCCTCCCTCATCTGTGCCCCAAGTT	22	-	38474221-38474270	22q13.1b	Homo sapiens solute carrier family 16, member 8 (monocarboxylic acid transporter 3) (SLC16A8), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10493836] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10493836] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]; The directed movement of lactate into, out of, within or between cells. Lactate is 2-hydroxypropanoate, CH3-CHOH-COOH; L(+)-lactate is formed by anaerobic glycolysis in animal tissues, and DL-lactate is found in sour milk, molasses and certain fruit juices [goid 15727] [pmid 10493836] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of lactate from one side of the membrane to the other. Lactate is 2-hydroxypropanoate, CH3-CHOH-COOH; L(+)-lactate is formed by anaerobic glycolysis in animal tissues, and DL-lactate is found in sour milk, molasses and certain fruit juices [goid 15129] [pmid 10493836] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism [goid 15355] [evidence IEA]	MCT3; REMP	MCT3
Homo sapiens	RefSeq	NM_006544.2	ILMN_10030	EXOC5	NM_006544.3	NM_006544.3		10640	82546833	NM_006544.3	EXOC5	NP_006535.1	ILMN_1788625	0004250181	S	6887	CACACTCGCCCATTTTCTAAGTGGTTTAGAAGGTTGCAGTCTGCCTCACC	14	-	57670768-57670817	14q23.1a	Homo sapiens exocyst complex component 5 (EXOC5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9119050] [evidence TAS]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles [goid 6892] [pmid 9119050] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The initial attachment of a transport vesicle membrane to the target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere [goid 48278] [evidence IEA]		HSEC10; DKFZp666H126; PRO1912; SEC10P; SEC10L1; SEC10	EXOC5; SEC10P; DKFZp666H126; MGC47692; PRO1912; SEC10
Homo sapiens	RefSeq	NM_182625.2	ILMN_8594	GEN1	NM_182625.2	NM_182625.2		348654	47271492	NM_182625.2	GEN1	NP_872431.2	ILMN_2206282	0001580044	S	2836	GTACTATCAGCAATAGCAGAGACAGAGGGAAGGTATCTAGTTCATGTGTG	2	+	17826723-17826772	2p24.2b	Homo sapiens Gen homolog 1, endonuclease (Drosophila) (GEN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ40869; DKFZp781F0986; Gen	FLJ40869; DKFZp781F0986; Gen
Homo sapiens	RefSeq	NM_182625.2	ILMN_8594	GEN1	NM_182625.2	NM_182625.2		348654	47271492	NM_182625.2	GEN1	NP_872431.2	ILMN_1680220	0002810408	S	2462	CTTGACAGACATTCCTCTGATGAACAAAGTGCCCCAGTGTTTGGGAAAGC	2	+	17826349-17826398	2p24.2b	Homo sapiens Gen homolog 1, endonuclease (Drosophila) (GEN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ40869; DKFZp781F0986; Gen	FLJ40869; DKFZp781F0986; Gen
Homo sapiens	RefSeq	NM_000884.2	ILMN_3439	IMPDH2	NM_000884.2	NM_000884.2		3615	66933015	NM_000884.2	IMPDH2	NP_000875.2	ILMN_1705737	0004590026	S	1385	CAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGAGTGTCTGGTGCTGTGC	3	-	49062188-49062235:49062329-49062330	3p21.31d	Homo sapiens IMP (inosine monophosphate) dehydrogenase 2 (IMPDH2), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7903306] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 7903306] [evidence EXP]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 1969416] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	IMPD2; IMPDH-II	IMPD2; IMPDH-II
Homo sapiens	RefSeq	NM_018369.1	ILMN_16725	DEPDC1B	NM_018369.1	NM_018369.1		55789	23510330	NM_018369.1	DEPDC1B	NP_060839.1	ILMN_1814600	0007330338	S	1061	AGATGCCACCCCTGTGTGATGGCTTTGGTACCCGAACACTGATGGTTCAG	5	-	59935142-59935151:59937274-59937313	5q12.1b	Homo sapiens DEP domain containing 1B (DEPDC1B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	XTP1; FLJ11252; BRCC3	XTP1; FLJ11252; BRCC3
Homo sapiens	RefSeq	NM_018369.1	ILMN_16725	DEPDC1B	NM_018369.1	NM_018369.1		55789	23510330	NM_018369.1	DEPDC1B	NP_060839.1	ILMN_2103685	0002370441	S	2328	CTTTGGGTACCCTTAGACCTCTGATTCTAAGTCAAATGCAAATGGGTTAA	5	-	59928585-59928634	5q12.1b	Homo sapiens DEP domain containing 1B (DEPDC1B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	XTP1; FLJ11252; BRCC3	XTP1; FLJ11252; BRCC3
Homo sapiens	Unigene	Hs.546898	ILMN_109434	HS.546898	Hs.546898		Hs.546898		49256617	BC073918			ILMN_1839190	0005390315	S	631	CACACCTCCAAATGCAATCTCCAGGATTCCCAAAGGCCAGGTCACCAGCC	17	-	38731768-38731817		Homo sapiens cDNA clone IMAGE:5169062, partial cds					
Homo sapiens	RefSeq	NM_016643.1	ILMN_4259	ZNF771	NM_016643.1	NM_016643.1		51333	7706191	NM_016643.1	ZNF771	NP_057727.1	ILMN_1708632	0003840278	S	1839	GAAGTCAAGAGTTTGAGATCAGCCTGGAGAACAAAGTGAGACCCCCATCT	16	+	30338176-30338225	16p11.2c	Homo sapiens zinc finger protein 771 (ZNF771), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DSC43	DSC43
Homo sapiens	RefSeq	NM_004289.5	ILMN_183192	NFE2L3	NM_004289.5	NM_004289.5		9603	46358355	NM_004289.5	NFE2L3	NP_004280.4	ILMN_2049766	0005820035	S	2615	CCCAGTAAGACTTTCCATCTTGGCAGCCATCCTTTTTAAGAGTAAGTTGG	7	+	26192199-26192248	7p15.2b	Homo sapiens nuclear factor (erythroid-derived 2)-like 3 (NFE2L3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10037736] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10037736] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10037736] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	NRF3	NRF3
Homo sapiens	Unigene	Hs.435279	ILMN_91425	HS.435279	Hs.435279		Hs.435279		27787297	CB049010			ILMN_1882270	0007400440	S	413	CACTGTCTGGCAGCTGGGAACACCCCGGCTAGGTGATAGGGAAGGACAAT	6_qbl_hap2	-	29583249-29583298		NISC_gj08b07.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:3270877 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001717976.1	ILMN_349875	LOC100133224	XM_001717976.1	XM_001717976.1		100133224	169215837	XM_001717976.1	LOC100133224	XP_001718028.1	ILMN_3292892	0000160022	M	871	AGAAGAGCATTACTGGAGCCCCAACACAGTACCCACCAGGACCGGGGGCT				22q12.2c	PREDICTED: Homo sapiens similar to hCG2041320 (LOC100133224), mRNA.					
Homo sapiens	RefSeq	XM_001717976.1	ILMN_349875	LOC100133224	XM_001717976.1	XM_001717976.1		100133224	169215837	XM_001717976.1	LOC100133224	XP_001718028.1	ILMN_3216382	0004610747	A	377	GGGCAGGAAGCGGAGGAACCTTGGAGCTTCGGCAGCTTTTCAAAGAGCTT				22q12.2c	PREDICTED: Homo sapiens similar to hCG2041320 (LOC100133224), mRNA.					
Homo sapiens	Unigene	Hs.564389	ILMN_117060	HS.564389	Hs.564389		Hs.564389		31942436	BX482494			ILMN_1893555	0005690619	S	274	ggccatgacggctttgcatgaatgtatgctgatattgtgggagtgggttc	12	-	87295291-87295340		DKFZp686C15231_r1 686 (synonym: hlcc3) Homo sapiens cDNA clone DKFZp686C15231 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001039708.1	ILMN_41608	SDCCAG3	NM_001039708.1	NM_001039708.1		10807	89353282	NM_001039708.1	SDCCAG3	NP_001034797.1	ILMN_2380850	0000060706	A	1408	TTGATCGCAAGAGTCCAGTGTCGTGCCCTCAGCCAGTTCTTGGCCACCAC	9	-	139297076-139297125	9q34.3d	Homo sapiens serologically defined colon cancer antigen 3 (SDCCAG3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			NY-CO-3	NY-CO-3
Homo sapiens	RefSeq	NM_006643.2	ILMN_41608	SDCCAG3	NM_001039708.1	NM_001039708.1		10807	89353282	NM_001039708.1	SDCCAG3	NP_001034797.1	ILMN_1803997	0007040553	S	1898	GTCCAGATGTGCCTCTTTGGCTGGGGGTTCTGGTGGACGTTTCAAGTGGC	9	-	139296586-139296635	9q34.3d	Homo sapiens serologically defined colon cancer antigen 3 (SDCCAG3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			NY-CO-3	NY-CO-3
Homo sapiens	RefSeq	NM_000742.1	ILMN_164549	CHRNA2	NM_000742.1	NM_000742.1		1135	4502822	NM_000742.1	CHRNA2	NP_000733.1	ILMN_1698849	0004210059	S	2539	TCATTCCTCTCCTTCCTTGCTGCAAAATGGCTCTGCACCAGCCGGCCCCC	8	-	27374259-27374308	8p21.2a	Homo sapiens cholinergic receptor, nicotinic, alpha 2 (neuronal) (CHRNA2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 8906617] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8906617] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 8906617] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8906617] [evidence IDA]	 [goid 4889] [pmid 8906617] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [pmid 8906617] [evidence IDA]		
Homo sapiens	RefSeq	NM_016614.2	ILMN_22153	TTRAP	NM_016614.2	NM_016614.2		51567	23510347	NM_016614.2	TTRAP	NP_057698.2	ILMN_2183216	0003310161	S	1708	GGCAAAGTTAAGCTTGATGATGGTTAAAATCGGTTTGATAGCACCATGGG	6	-	24758351-24758400	6p22.2b	Homo sapiens TRAF and TNF receptor associated protein (TTRAP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10764746] [evidence TAS]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10764746] [evidence TAS]	EAP2; AD022; MGC111021; MGC9099; dJ30M3.3; RP1-30M3.3	EAP2; AD022; MGC111021; MGC9099; dJ30M3.3; RP1-30M3.3
Homo sapiens	RefSeq	NM_016614.2	ILMN_22153	TTRAP	NM_016614.2	NM_016614.2		51567	23510347	NM_016614.2	TTRAP	NP_057698.2	ILMN_1785821	0003190189	S	1316	AGGCCATTTAATAAAAAGGGCACAAAGCCTGTCAGAGTTTTCAACGGTGC	6	-	24758743-24758792	6p22.2b	Homo sapiens TRAF and TNF receptor associated protein (TTRAP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10764746] [evidence TAS]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10764746] [evidence TAS]	EAP2; AD022; MGC111021; MGC9099; dJ30M3.3; RP1-30M3.3	EAP2; AD022; MGC111021; MGC9099; dJ30M3.3; RP1-30M3.3
Homo sapiens	RefSeq	NM_018133.2	ILMN_168076	MSL2	NM_018133.2	NM_018133.2		55167	38570120	NM_018133.2	MSL2	NP_060603.2	ILMN_2171102	0004290402	S	4501	TGGGAGGTTGGCAATATAGACAAAGTGGAAATCATTAGTATGTGAGGGCC	3	-	137350595-137350644	3q22.2b	Homo sapiens male-specific lethal 2 homolog (Drosophila) (MSL2), mRNA.				KIAA1585; RNF184; FLJ10546; MSL-2	KIAA1585; RNF184; FLJ10546; MSL-2
Homo sapiens	RefSeq	NM_006184.3	ILMN_29645	NUCB1	NM_006184.3	NM_006184.3		4924	39725676	NM_006184.3	NUCB1	NP_006175.2	ILMN_1722634	0006520026	S	2176	CTGACACTGCTCCGCATCCTGCTGTGTGTCCTGTTCCATGTTCCGGTTCC	19	+	54118266-54118315	19q13.33a	Homo sapiens nucleobindin 1 (NUCB1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1520323] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1520323] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp686A15286; NUC; FLJ40471	DKFZp686A15286; NUC; FLJ40471
Homo sapiens	RefSeq	NM_207646.1	ILMN_11386	LOC400696	NM_207646.1	NM_207646.1		400696	46518523	NM_207646.1	LOC400696	NP_997529.1	ILMN_1759989	0001660110	S	2075	CTGCTACCGTTGGCATTGCAGAACCGGAAACCTCCCCAACACATATTCAC	19	+	44867692-44867741	19q13.2a	Homo sapiens eosinophil lysophospholipase-like (LOC400696), mRNA.					
Homo sapiens	RefSeq	NM_021158.3	ILMN_21257	TRIB3	NM_021158.3	NM_021158.3		57761	41327717	NM_021158.3	TRIB3	NP_066981.2	ILMN_1787815	0001990630	S	2258	CATGGGGCTTCTGACCTGAGCACCAAGGTTGAGGGACAGGATTAGGCAGG	20	+	326009-326058	20p13f	Homo sapiens tribbles homolog 3 (Drosophila) (TRIB3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that modulates the frequency, rate or extent of MAP kinase activity [goid 43405] [pmid 15299019] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12743605] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 15299019] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 15299019] [evidence IPI]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	TRB3; C20orf97; SKIP3; NIPK; SINK	TRB3; C20orf97; SKIP3; NIPK; SINK
Homo sapiens	RefSeq	NM_181335.2	ILMN_10507	ARHGAP8	NM_181335.2	NM_181335.2		23779	66346659	NM_181335.2	ARHGAP8	NP_851852.2	ILMN_2342851	0000060551	A	103	GTGCTGGGTGCAGTGAGGAAGAGGCCCTCGGTGGTGCCCATGGCTGGCCA	22	+	43561033-43561071:43561072-43561082	22q13.31b	Homo sapiens Rho GTPase activating protein 8 (ARHGAP8), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	PP610; FLJ20185; BPGAP1	PP610; FLJ20185; BPGAP1
Homo sapiens	RefSeq	NM_181871.1	ILMN_24490	PKLR	NM_181871.2	NM_181871.2		5313	82659100	NM_181871.2	PKLR	NP_870986.1	ILMN_1777031	0000510164	A	2323	TGCCTGATACCCTGCTTGGTCAAATCCCCGGCTGCTTCCTTCTGCACCCA	1	-	153526314-153526363	1q22a	Homo sapiens pyruvate kinase, liver and RBC (PKLR), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 3126495] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	PKL; PK1; RPK	PKL; PK1; RPK
Homo sapiens	RefSeq	NM_181871.1	ILMN_24490	PKLR	NM_181871.2	NM_181871.2		5313	82659100	NM_181871.2	PKLR	NP_870986.1	ILMN_1725172	0005720646	I	22	GTGGAGCAGACCCACAGAGAGGGAGACCCAGAGAGGTGTGCAGTGGCATG	1	-	153537299-153537302:153537303-153537348	1q22a	Homo sapiens pyruvate kinase, liver and RBC (PKLR), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 3126495] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	PKL; PK1; RPK	PKL; PK1; RPK
Homo sapiens	RefSeq	NM_006769.2	ILMN_183982	LMO4	NM_006769.2	NM_006769.2		8543	7108354	NM_006769.2	LMO4	NP_006760.1	ILMN_1703487	0005910523	S	1615	CTACCCTCATTAACAATTAGCAGGGCACTGGCCAGAGTTTGTACCCTGTG	1	+	87583404-87583453	1p22.3a	Homo sapiens LIM domain only 4 (LMO4), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10209267] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_006769.2	ILMN_183982	LMO4	NM_006769.2	NM_006769.2		8543	7108354	NM_006769.2	LMO4	NP_006760.1	ILMN_2117171	0007210450	S	1916	CAGGCTCATAGCAGCTACTGTGTAGAAAATTCCCCCTACTTCTAATTTGC	1	+	87583705-87583754	1p22.3a	Homo sapiens LIM domain only 4 (LMO4), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence ISS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10209267] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	Unigene	Hs.213061	ILMN_82345	HS.213061	Hs.213061		Hs.213061		21755199	AK095855			ILMN_1869109	0000150343	S	2875	GAAGGGTTTCCAGGACTGCGTGTCTGCTCCTGAGCTCTGTTTTAAGTATG	1	-	203949142-203949191		Homo sapiens cDNA FLJ38536 fis, clone HCHON2001200					
Homo sapiens	RefSeq	XM_497334.2	ILMN_180488	TSPAN11	NM_001080509.1	NM_001080509.1		441631	122937465	NM_001080509.1	TSPAN11	NP_001073978.1	ILMN_1697810	0003520228	A	530	CACGCAGATCACCGCCTCAGTGGACCGACTCCAGCAGGATTTCAAGTGCT	12	+	31023833-31023872:31026734-31026743	12p11.21b	Homo sapiens tetraspanin 11 (TSPAN11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_001080509.1	ILMN_180488	TSPAN11	NM_001080509.1	NM_001080509.1		441631	122937465	NM_001080509.1	TSPAN11	NP_001073978.1	ILMN_2341524	0005050709	A	1207	CAGCTCCTGAACCTGGAACAATCGGCAGAAAACCCAGGAACCCCGGCACT	12	+	31036449-31036498	12p11.21b	Homo sapiens tetraspanin 11 (TSPAN11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_002102.2	ILMN_21264	GYPE	NM_002102.3	NM_002102.3		2996	149408156	NM_002102.3	GYPE	NP_002093.2	ILMN_1695187	0006940086	I	308	AGGATGTGGCCTGCATGCTGCCTGATCTTGCCTAGAACCAGCTGCACCTG	4	-	145016057-145016106	4q31.22a	Homo sapiens glycophorin E (GYPE), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2295603] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7622054] [evidence TAS]			GPE; MNS; MiIX	GPE; MNS; MiIX
Homo sapiens	RefSeq	NM_002102.2	ILMN_21264	GYPE	NM_002102.3	NM_002102.3		2996	149408156	NM_002102.3	GYPE	NP_002093.2	ILMN_1812163	0003520300	A	181	CACAGACAAATGGGATAACACTCATTAATTGGTGGGCGATGGCTCGTGTT	4	-	145017420-145017458:145021014-145021024	4q31.22a	Homo sapiens glycophorin E (GYPE), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2295603] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7622054] [evidence TAS]			GPE; MNS; MiIX	GPE; MNS; MiIX
Homo sapiens	RefSeq	XR_042392.1	ILMN_339666	LOC440225	XR_042392.1	XR_042392.1		440225	169209204	XR_042392.1	LOC440225		ILMN_3250421	0003840372	I	1218	GTATACCTCGGTCCTCCAGAGCACAAACCTGTGGCAGATACATACCGGTC				15q11.2a-q11.2b	PREDICTED: Homo sapiens misc_RNA (LOC440225), miscRNA.					
Homo sapiens	RefSeq	XR_038751.1	ILMN_338841	LOC648927	XR_038751.1	XR_038751.1		648927	169216338	XR_038751.1	LOC648927		ILMN_3203874	0003170075	A	2403	CACTGTGGGTTGAGGGAGCTAATTTTAAGCATGTTCAGTGGCAGCTCCCC				Xq21.33b	PREDICTED: Homo sapiens misc_RNA (LOC648927), miscRNA.					
Homo sapiens	RefSeq	XR_039107.1	ILMN_352156	LOC729135	XR_039107.1	XR_039107.1		729135	169162557	XR_039107.1	LOC729135		ILMN_3248896	0000870450	S	941	GCGGCGACCCGCGACCATCTTGTCAGTTGCTGCCGCCTCGCAAAGGGCAT	1	-	147939839-147939888	1q21.1e	PREDICTED: Homo sapiens misc_RNA (LOC729135), miscRNA.					
Homo sapiens	RefSeq	NM_001135241.1	ILMN_364168	AKR1C2	NM_001135241.1	NM_001135241.1		1646	207028672	NM_001135241.1	AKR1C2	NP_001128713.1	ILMN_3237488	0006510692	S	647	GCTGTGGTGTCCAGAAAACCTGCTGCACATAGGGTGCACAATGAGTTTCC	10	-	5042351-5042400	10p15.1c	Homo sapiens aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III) (AKR1C2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [pmid 8573067] [evidence IDA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 8573067] [evidence IDA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 8573067] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 32052] [pmid 8573067] [evidence IDA]; Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+ [goid 47026] [evidence IEA]; Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol [goid 47115] [pmid 8573067] [evidence IDA]		
Homo sapiens	RefSeq	XM_941322.1	ILMN_38662	LOC652022	XM_941322.1	XM_941322.1		652022	89062344	XM_941322.1	LOC652022	XP_946415.1	ILMN_1699790	0000520100	S	417	CATGAGCCGTGATGAGACGCTCGATACCTACGTTCCGCCCACCCAGGCTT					PREDICTED: Homo sapiens similar to mindbomb homolog 2 (LOC652022), mRNA.					
Homo sapiens	RefSeq	NM_012423.2	ILMN_2500	RPL13A	NM_012423.2	NM_012423.2		23521	14591905	NM_012423.2	RPL13A	NP_036555.1	ILMN_1713369	0006060356	S	729	TGCCACAGGCAGCCCTGGGACATAGGAAGCTGGGAGCAAGGAAAGGGTCT	19	+	49995167-49995216	19q13.33b	Homo sapiens ribosomal protein L13a (RPL13A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [pmid 10580157] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 10580157] [evidence TAS]		
Homo sapiens	RefSeq	XM_001717393.1	ILMN_336231	LOC100129480	XM_001717393.1	XM_001717393.1		100129480	169165876	XM_001717393.1	LOC100129480	XP_001717445.1	ILMN_3254519	0006200274	M	2808	CAGGGTTTGACCATGAAAGCTGTGCCCTTAACCCCTGGGCCACACTGCAG				3p25.1d	PREDICTED: Homo sapiens similar to hCG2042446 (LOC100129480), mRNA.					
Homo sapiens	RefSeq	NM_001014368.1	ILMN_11018	HSP90AB2P	NM_001014368.1	NM_001014368.1		391634	62122860	NM_001014368.1	HSP90AB2P	NP_001014390.1	ILMN_1698735	0002450575	S	990	GACCGAGCCCATTGATGGCTACCAACTCAAGGAGTTTGATGGGAAGAGCC	4	+	12948737-12948786	4p15.33c	Homo sapiens heat shock protein 90kDa alpha (cytosolic), class B member 2 (pseudogene) (HSP90AB2P), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	HSP90BB	HSP90BB
Homo sapiens	RefSeq	NM_000478.2	ILMN_169862	ALPL	NM_000478.3	NM_000478.3		249	116734716	NM_000478.3	ALPL	NP_000469.3	ILMN_1701603	0006100356	S	2442	TCACACTCCTGGGCTCTGAACACACACGCCAGCTCCTCTCTGAAGCGACT	1	+	21777338-21777387	1p36.12b	Homo sapiens alkaline phosphatase, liver/bone/kidney (ALPL), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9781036] [evidence TAS]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum [goid 4035] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum [goid 4035] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	TNSALP; HOPS; FLJ40094; AP-TNAP; TNAP; MGC161443	TNSALP; HOPS; AP-TNAP; TNAP
Homo sapiens	RefSeq	XR_037921.1	ILMN_338397	LOC100132306	XR_037921.1	XR_037921.1		100132306	169162653	XR_037921.1	LOC100132306		ILMN_3238442	0006660110	S	107	ACCCAGTGCTCGGTTGGCCCGGGCCGCGCTTAACTGTCCCAGGTCAGTTA	1	+	147913230-147913279	1q21.1e	PREDICTED: Homo sapiens misc_RNA (LOC100132306), miscRNA.					
Homo sapiens	RefSeq	NM_015651.1	ILMN_21027	PHF19	NM_015651.1	NM_015651.1		26147	58331160	NM_015651.1	PHF19	NP_056466.1	ILMN_1713249	0002570091	I	4058	GGGGTGTCTGCACCACCTGGGAAGATAGCACAAGGCCTAATGAGGTCACC	9	-	123618110-123618159	9q33.2a	Homo sapiens PHD finger protein 19 (PHF19), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC131698; PCL3; MGC23929; MGC149713; MGC149712	MGC131698; PCL3; MGC23929; MGC149713; MGC149712
Homo sapiens	RefSeq	XM_926699.1	ILMN_38413	LOC643369	XM_926699.1	XM_926699.1		643369	89058161	XM_926699.1	LOC643369	XP_931792.1	ILMN_1707218	0000460360	S	85	GTTGATACTGAGGCTCCAGTTGTTCGTTCATTGACCAATGGAGAACTAGC	21	-	23474727-23474776		PREDICTED: Homo sapiens hypothetical protein LOC643369 (LOC643369), mRNA.					
Homo sapiens	RefSeq	XM_293943.2	ILMN_9127	LOC340096	XM_293943.2	XM_293943.2		340096	37549908	XM_293943.2	LOC340096	XP_293943.2	ILMN_1767344	0007610743	S	394	CGTGGAGAGGGTGCCGGAGAGCCCACGCTCCTGGGAAACCTTGCACTCTA	5	-	17544434-17544483	5p15.1a	PREDICTED: Homo sapiens similar to HIStone family member (his-72) (LOC340096), mRNA.					
Homo sapiens	RefSeq	NM_022902.2	ILMN_24834	SLC30A5	NM_022902.2	NM_022902.2		64924	20070322	NM_022902.2	SLC30A5	NP_075053.2	ILMN_2258471	0003420301	I	2595	GTACAGAAACAGAGTTCCCTACTACTGGATCAAGGAATCTTTCTTGAAGG	5	+	68425540-68425589	5q13.2a	Homo sapiens solute carrier family 30 (zinc transporter), member 5 (SLC30A5), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11937503] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10330022] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11937503] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 11937503] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [pmid 10330022] [evidence IDA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [pmid 11937503] [evidence IDA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [pmid 10330022] [evidence IDA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [pmid 11937503] [evidence IDA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [pmid 11937503] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [pmid 11937503] [evidence IDA]; Any process that modulates the frequency, rate or extent of proton transport into, out of, within or between cells [goid 10155] [pmid 11937503] [evidence NAS]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [pmid 11937503] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11937503] [evidence NAS]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	ZnT-5; MGC5499; ZTL1; FLJ12496; ZNTL1; FLJ12756; ZNT5	ZnT-5; MGC5499; ZTL1; FLJ12496; ZNTL1; FLJ12756; ZNT5
Homo sapiens	RefSeq	NM_024055.2	ILMN_24834	SLC30A5	NM_022902.2	NM_022902.2		64924	20070322	NM_022902.2	SLC30A5	NP_075053.2	ILMN_1709728	0001230730	A	493	CATGCAGTTGCTGGGTGTATTATTTCACTCTTGTGGTTTTTTGGCCTCAC	5	+	68400476-68400525	5q13.2a	Homo sapiens solute carrier family 30 (zinc transporter), member 5 (SLC30A5), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11937503] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10330022] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11937503] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 11937503] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [pmid 10330022] [evidence IDA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [pmid 11937503] [evidence IDA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [pmid 10330022] [evidence IDA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [pmid 11937503] [evidence IDA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [pmid 11937503] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [pmid 11937503] [evidence IDA]; Any process that modulates the frequency, rate or extent of proton transport into, out of, within or between cells [goid 10155] [pmid 11937503] [evidence NAS]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [pmid 11937503] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11937503] [evidence NAS]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	ZnT-5; MGC5499; ZTL1; FLJ12496; ZNTL1; FLJ12756; ZNT5	ZnT-5; MGC5499; ZTL1; FLJ12496; ZNTL1; FLJ12756; ZNT5
Homo sapiens	RefSeq	NM_022902.2	ILMN_24834	SLC30A5	NM_022902.2	NM_022902.2		64924	20070322	NM_022902.2	SLC30A5	NP_075053.2	ILMN_1664153	0004810451	I	2228	ACCGAGACCCTCATTTTTGGCGTCATTCTGCTAGTATTGTGGCAGGAACA	5	+	68423859-68423908	5q13.2a	Homo sapiens solute carrier family 30 (zinc transporter), member 5 (SLC30A5), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11937503] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10330022] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11937503] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 11937503] [evidence IDA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [pmid 10330022] [evidence IDA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [pmid 11937503] [evidence IDA]; The directed movement of cobalt (Co) ions into, out of, within or between cells [goid 6824] [pmid 10330022] [evidence IDA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [pmid 11937503] [evidence IDA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [pmid 11937503] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [pmid 11937503] [evidence IDA]; Any process that modulates the frequency, rate or extent of proton transport into, out of, within or between cells [goid 10155] [pmid 11937503] [evidence NAS]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [pmid 11937503] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11937503] [evidence NAS]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	ZnT-5; MGC5499; ZTL1; FLJ12496; ZNTL1; FLJ12756; ZNT5	ZnT-5; MGC5499; ZTL1; FLJ12496; ZNTL1; FLJ12756; ZNT5
Homo sapiens	RefSeq	XM_001714086.1	ILMN_344300	LOC100133692	XM_001714086.1	XM_001714086.1		100133692	169161521	XM_001714086.1	LOC100133692	XP_001714138.1	ILMN_3243069	0004670561	S	358	GAGCACGAACGTCGGAAACGGCATCGAGAAGAACAGGATAAAGCTCGCCG					PREDICTED: Homo sapiens similar to cell division cycle 2-like 1 (PITSLRE proteins) (LOC100133692), mRNA.					
Homo sapiens	RefSeq	XM_001714187.1	ILMN_346992	LOC399936	XM_001714187.1	XM_001714187.1		399936	169218013	XM_001714187.1	LOC399936	XP_001714239.1	ILMN_3245156	0002070259	S	477	TGTGGAAACCACCAGAATCAGCCACTGGAAGGGTTTCGGAGACATATTAC					PREDICTED: Homo sapiens similar to hCG1988749 (LOC399936), mRNA.					
Homo sapiens	RefSeq	NM_002852.2	ILMN_13254	PTX3	NM_002852.2	NM_002852.2		5806	31543449	NM_002852.2	PTX3	NP_002843.1	ILMN_1801842	0003460682	S	1132	GGGATAGTGTTCTTAGCAATGAAGAGATAAGAGAGACCGGAGGAGCAGAG	3	+	158643332-158643381	3q25.32a	Homo sapiens pentraxin-related gene, rapidly induced by IL-1 beta (PTX3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1429570] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a yeast species [goid 1878] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 1429570] [evidence TAS]; The process by which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody [goid 8228] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IEA]	Interacting selectively with zymosan [goid 1872] [evidence IEA]	TSG-14; TNFAIP5	TSG-14; TNFAIP5
Homo sapiens	RefSeq	NM_003373.3	ILMN_26712	VCL	NM_003373.3	NM_003373.3		7414	50593538	NM_003373.3	VCL	NP_003364.1	ILMN_2413527	0002900068	A	3807	ACCTGGGTCCTTTTCAGAAGTGAGCTTTGCTGCTACAGGGGAAGGTGGCC	10	+	75548445-75548494	10q22.2a-q22.2b	Homo sapiens vinculin (VCL), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence ISS]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence ISS]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence ISS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [pmid 2116004] [evidence NAS]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [evidence ISS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 9700171] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 16130169] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 15501673] [evidence TAS]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [pmid 15494027] [evidence TAS]; The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents [goid 43297] [pmid 9700171] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 7816144] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence ISS]; Interacting selectively with the alpha subunit of the catenin complex [goid 45294] [pmid 9700171] [evidence IPI]	MVCL; CMD1W	MVCL; CMD1W
Homo sapiens	Unigene	Hs.541868	ILMN_105980	HS.541868	Hs.541868		Hs.541868		9439006	BE439524			ILMN_1880796	0004830743	S	95	CTGATGAGGGAGAAAACCATATCCATGGTCCCAGCGGTCTGGAGGATCCC	2	+	104892169-104892218		HTM1-160F1 HTM1 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	Unigene	Hs.554075	ILMN_111791	HS.554075	Hs.554075		Hs.554075		24040446	BU855480			ILMN_1894480	0002030072	S	629	GACTCAGCTTCGCCTTTAGAGATACTCATGCTTTCTGGCAACAGAGGTCC	11	+	71502185-71502234		AGENCOURT_10457217 NIH_MGC_109 Homo sapiens cDNA clone IMAGE:6644984 5, mRNA sequence					
Homo sapiens	RefSeq	NM_182610.1	ILMN_22758	SAMD7	NM_182610.2	NM_182610.2		344658	141802512	NM_182610.2	SAMD7	NP_872416.1	ILMN_1748150	0003990474	S	1977	AGGCAACCCAATGAAACCACAGAGAGGCAGAAGAGAACGGGCAGAAGTAC	3	+	169656663-169656712	3q26.2b	Homo sapiens sterile alpha motif domain containing 7 (SAMD7), mRNA.				DKFZp686E1583	DKFZp686E1583
Homo sapiens	RefSeq	NM_001005278.1	ILMN_8322	OR6N2	NM_001005278.1	NM_001005278.1		81442	52627157	NM_001005278.1	OR6N2	NP_001005278.1	ILMN_1724427	0005390468	S	719	CCTGTGCCTCACATCTTGCTGTGGTCCTCATCTTCTTTGGGAGCATCATC	1	-	158746657-158746706	1q23.1g	Homo sapiens olfactory receptor, family 6, subfamily N, member 2 (OR6N2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-23	OR1-23
Homo sapiens	RefSeq	NM_001042490.3	ILMN_182548	GTF2H2D	NM_001042490.3	NM_001042490.3		730394	142386122	NM_001042490.3	GTF2H2D	NP_001035955.1	ILMN_3242688	0006660722	S	140	TTGTGAAGGCAGAGGAAGGCTGGAGTGCAGTGGCACAACCTTGGCTCGCT	5	+	68856213-68856230:68858500-68858531		Homo sapiens general transcription factor IIH, polypeptide 2D (GTF2H2D), mRNA.				MGC75050; DKFZp686M0199; MGC75049	
Homo sapiens	RefSeq	XM_939432.1	ILMN_41356	MGC61598	XM_939432.1	XM_939432.1		441478	89030632	XM_939432.1	MGC61598	XP_944525.1	ILMN_1658847	0003800482	I	2480	ACTTGAGGACACAGGTGGGTGGAGGCCCTTTGTGCGTGGCTGGTCGTATT				9q34.3f	PREDICTED: Homo sapiens similar to ankyrin-repeat protein Nrarp (MGC61598), mRNA.					
Homo sapiens	RefSeq	NM_001001479.1	ILMN_26184	SLC35E4	NM_001001479.2	NM_001001479.2		339665	109948261	NM_001001479.2	SLC35E4	NP_001001479.1	ILMN_1803728	0002940630	S	1561	CGCCTCAGTGCCCTCAGCTACGTGGGCATCGCACTCACTCTTTCAGGAAT	22	+	29372881-29372930	22q12.2b	Homo sapiens solute carrier family 35, member E4 (SLC35E4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC129826	
Homo sapiens	RefSeq	XM_938659.1	ILMN_38773	LOC649596	XM_938659.1	XM_938659.1		649596	89057671	XM_938659.1	LOC649596	XP_943752.1	ILMN_1801435	0004850093	S	41	GTGAGGACCAGAGAAAGGAACAACACAAAGGAGAAGGACACGAGGTGGTG					PREDICTED: Homo sapiens similar to zinc finger protein 329 (LOC649596), mRNA.					
Homo sapiens	Unigene	Hs.552297	ILMN_110935	HS.552297	Hs.552297		Hs.552297		58299521	CX782731			ILMN_1893047	0001400273	S	353	GTTGGGGGAAGGGACAGGGGCAGGATGCAAAAAAGTGTGCCTGGGATTCT	1	-	230340438-230340487		HESC3_16_H10.b1_A036 Human embryonic stem cells Homo sapiens cDNA clone IMAGE:7477126 3, mRNA sequence					
Homo sapiens	RefSeq	XM_928034.1	ILMN_43592	LOC644950	XM_928034.1	XM_928034.1		644950	88965588	XM_928034.1	LOC644950	XP_933127.1	ILMN_1675830	0000380612	S	95	CTGTGGCACTCCGTGAAATCAGACGTTATCAGAAGGCCACTGAACTTCTG	3	-	110611439-110611488	3q13.13b	PREDICTED: Homo sapiens similar to H3 histone, family 3B (LOC644950), mRNA.					
Homo sapiens	RefSeq	XM_001722596.1	ILMN_352516	LOC100128819	XM_001722596.1	XM_001722596.1		100128819	169211118	XM_001722596.1	LOC100128819	XP_001722648.1	ILMN_3249147	0006770482	S	313	CTCAGTGCCCGACAACGAAGAATCCAGAAGCTGTCCCTTCAGTATTCACT	17	+	129196-129245		PREDICTED: Homo sapiens hypothetical protein LOC100128819 (LOC100128819), mRNA.					
Homo sapiens	RefSeq	XM_928376.1	ILMN_34234	LOC645342	XM_928376.1	XM_928376.1		645342	88976681	XM_928376.1	LOC645342	XP_933469.1	ILMN_1679342	0002320711	S	61	AAACAGCAGGACATGGCCTTCAAAGAAATCAAGAAGGCTTTGATCCAGGC	4	-	115733665-115733714		PREDICTED: Homo sapiens hypothetical protein LOC645342 (LOC645342), mRNA.					
Homo sapiens	RefSeq	NM_000609.4	ILMN_16782	CXCL12	NM_000609.4	NM_000609.4		6387	76563934	NM_000609.4	CXCL12	NP_000600.1	ILMN_1803825	0003870253	I	3074	CCCTGACTGGGAGTTGATCGCCTTTCCCAGGTGCTACACCCTTTTCCAGC	10	-	44866023-44866072	10q11.21c	Homo sapiens chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) (CXCL12), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 10772939] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10620615] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10802710] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10198043] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10491003] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8752280] [evidence TAS]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 10772939] [evidence TAS]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [pmid 10570282] [evidence TAS]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 10772939] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10802710] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10491003] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10772939] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	chemokine; SDF1A; TPAR1; SDF1; SDF1B; SCYB12; TLSF-b; SDF-1b; TLSF-a; PBSF; SDF-1a	chemokine; SDF1A; TPAR1; SDF1; SDF1B; SCYB12; TLSF-b; SDF-1b; TLSF-a; PBSF; SDF-1a
Homo sapiens	RefSeq	NM_001033886.1	ILMN_16782	CXCL12	NM_000609.4	NM_000609.4		6387	76563934	NM_000609.4	CXCL12	NP_000600.1	ILMN_1689111	0004610615	A	161	CAGCCTGAGCTACAGATGCCCATGCCGATTCTTCGAAAGCCATGTTGCCA	10	-	44876268-44876317	10q11.21c	Homo sapiens chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) (CXCL12), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 10772939] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10620615] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10802710] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10198043] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10491003] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8752280] [evidence TAS]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 10772939] [evidence TAS]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [pmid 10570282] [evidence TAS]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 10772939] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10802710] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10491003] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10772939] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	chemokine; SDF1A; TPAR1; SDF1; SDF1B; SCYB12; TLSF-b; SDF-1b; TLSF-a; PBSF; SDF-1a	SDF1A; TPAR1; SDF1; SDF1B; SCYB12; TLSF-b; SDF-1b; TLSF-a; PBSF; SDF-1a
Homo sapiens	RefSeq	NM_014404.1	ILMN_10636	CACNG5	NM_014404.1	NM_014404.1		27091	7656949	NM_014404.1	CACNG5	NP_055219.1	ILMN_2242309	0003120377	I	623	TGAGCCGGGGAGAGTGGGGATGGGGGAGAAGGGACATTCCACAACCATTT	17	+	62311293-62311342	17q24.2a	Homo sapiens calcium channel, voltage-dependent, gamma subunit 5 (CACNG5), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 10613843] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC126656; MGC126682	MGC126656; MGC126682
Homo sapiens	RefSeq	NM_014404.1	ILMN_10636	CACNG5	NM_014404.1	NM_014404.1		27091	7656949	NM_014404.1	CACNG5	NP_055219.1	ILMN_1749402	0003440731	A	519	CAAGTATGGGTGGTCGTTTGCCTTCGCCGCCATCTCCTTCCTTTTAACGG	17	+	62311189-62311238	17q24.2a	Homo sapiens calcium channel, voltage-dependent, gamma subunit 5 (CACNG5), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 10613843] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC126656; MGC126682	MGC126656; MGC126682
Homo sapiens	RefSeq	NM_001004691.1	ILMN_162580	OR2M7	NM_001004691.1	NM_001004691.1		391196	52317208	NM_001004691.1	OR2M7	NP_001004691.1	ILMN_1655713	0007650348	S	771	CATGTGCATTCAGCCCACATCTCATCATTCTCCTATGCAGGACAAGATGG	1	-	248487050-248487099	1q44f	Homo sapiens olfactory receptor, family 2, subfamily M, member 7 (OR2M7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-58	OR1-58
Homo sapiens	RefSeq	NM_000638.2	ILMN_38193	VTN	NM_000638.3	NM_000638.3		7448	88853068	NM_000638.3	VTN	NP_000629.3	ILMN_1691127	0001090008	S	1384	TGGGAGCCAACAACTATGATGACTACAGGATGGACTGGCTTGTGCCTGCC	17	-	26694775-26694824	17q11.2a	Homo sapiens vitronectin (VTN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2418831] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2418831] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2418831] [evidence TAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12808446] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	VNT; VN; V75	VNT; V75
Homo sapiens	RefSeq	XM_930757.1	ILMN_31637	LOC642370	XM_930757.1	XM_930757.1		642370	89041127	XM_930757.1	LOC642370	XP_935850.1	ILMN_1786545	0002850253	S	210	TCTTCCGGGGTCCCAGCGGGTCGGGCTCATGATTCCCCGGCCCCGCATTC	17	+	602422-602471		PREDICTED: Homo sapiens hypothetical protein LOC642370 (LOC642370), mRNA.					
Homo sapiens	RefSeq	XR_000645.1	ILMN_35250	FLJ12355	XR_000645.1	XR_000645.1		80054	89057390	XR_000645.1	FLJ12355		ILMN_1697115	0003930082	A	2030	GGGTGGATGTGCTGTGATGAAGAGAAGTCCTGCCCTGAACAAGGTGGCGC				19q13.11b	PREDICTED: Homo sapiens hypothetical protein FLJ12355 (FLJ12355), misc RNA.					
Homo sapiens	RefSeq	XM_001718804.1	ILMN_351125	LOC644153	XM_001718804.1	XM_001718804.1		644153	169208148	XM_001718804.1	LOC644153	XP_001718856.1	ILMN_3234121	0004290095	I	563	TTTTCCTTCTGTCAGGCCTGGTGGCTGTTATGTTGGGCTCCCCAAGCCCC	15	+	30466463-30466508:30466755-30466758	15q13.3c	PREDICTED: Homo sapiens similar to hCG1743199 (LOC644153), mRNA.					
Homo sapiens	RefSeq	NM_022770.2	ILMN_7033	GINS3	NM_022770.2	NM_022770.2		64785	21362087	NM_022770.2	GINS3	NP_073607.2	ILMN_1754272	0003060192	S	1799	GGCCCATTAGACTGTTTGCAGGGCATCACTGCTTCCCCCTGACACCTCAC	16	+	56997199-56997248	16q21a	Homo sapiens GINS complex subunit 3 (Psf3 homolog) (GINS3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]		FLJ13912; PSF3	FLJ13912; PSF3
Homo sapiens	RefSeq	XM_001714006.1	ILMN_348256	LOC100132799	XM_001714006.1	XM_001714006.1		100132799	169208487	XM_001714006.1	LOC100132799	XP_001714058.1	ILMN_3246195	0005310273	S	1	ATGGGCCCCAAAAGGTCTGCGGGCGACGCGGGCTCCCACCTCAGGGCGCA	15	-	82633079-82633128	15q25.2b	PREDICTED: Homo sapiens hypothetical LOC100132799 (LOC100132799), mRNA.					
Homo sapiens	RefSeq	XM_378517.3	ILMN_31014	MGC15885	XM_378517.4	XM_378517.4		197003	113425245	XM_378517.4	MGC15885	XP_378517.1	ILMN_1785058	0001430593	A	2175	GGAGATGCTATCACCTGATGACCACTCAGCAATGAAGTGCTCCAGGGCGC	15	-	60717136-60717185	15q22.2b	PREDICTED: Homo sapiens hypothetical protein MGC15885 (MGC15885), mRNA.					
Homo sapiens	RefSeq	NR_003580.1	ILMN_308785	LOC100093631	NR_003580.1	NR_003580.1		100093631	149274644	NR_003580.1	LOC100093631		ILMN_3239689	0005700139	S	99	CTGCCTCCCTCGCCCCGCGGGCGGACGATGGAACTCCACATCCTGGAGCA	7	+	72207046-72207060:72207243-72207277	7q11.23a	Homo sapiens general transcription factor II, i, pseudogene (LOC100093631), non-coding RNA.					
Homo sapiens	RefSeq	XM_925886.1	ILMN_34649	LOC642355	XM_925886.1	XM_925886.1		642355	89025511	XM_925886.1	LOC642355	XP_930979.1	ILMN_1670716	0004540762	S	1	ATGGATGGACAGTGTTTTATTGCAGGGGTCCTCAACCCTCGGACCGTGTA	7	-	139793026-139793075	7q34c	PREDICTED: Homo sapiens similar to Nucleoside diphosphate kinase, mitochondrial precursor (NDP kinase, mitochondrial) (NDK) (nm23-H4) (Nucleoside diphosphate kinase D) (NDPKD) (LOC642355), mRNA.					
Homo sapiens	RefSeq	XM_937570.1	ILMN_37109	LOC646508	XM_937570.1	XM_937570.1		646508	89057617	XM_937570.1	LOC646508	XP_942663.1	ILMN_1805833	0003290603	S	145	ACCAAAGGACATGGCGGGGACGTTACTGCCTCCCTGCTCCCTGTTCTGAA				19q13.41b	PREDICTED: Homo sapiens hypothetical LOC646508 (LOC646508), mRNA.					
Homo sapiens	RefSeq	XM_939086.1	ILMN_41671	LOC649999	XM_939086.1	XM_939086.1		649999	89061067	XM_939086.1	LOC649999	XP_944179.1	ILMN_1802834	0004810681	S	2323	GCCCACCCCCCGTGGCTTCTGCTGTGGCTATATTGGCCTAGAGGGGCTGG					PREDICTED: Homo sapiens hypothetical protein LOC649999 (LOC649999), mRNA.					
Homo sapiens	RefSeq	NM_178583.1	ILMN_3230	WDFY3	NM_178583.1	NM_178583.1		23001	31317267	NM_178583.1	WDFY3	NP_848698.1	ILMN_1697493	0005220538	I	3144	GGGGGAATCCAGGGTTCTCAGGCAGATTGTAGGAGAGCCACTTCATCTAG	4	-	85949346-85949395	4q21.23b	Homo sapiens WD repeat and FYVE domain containing 3 (WDFY3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ALFY; KIAA0993; ZFYVE25; MGC16461	ALFY; KIAA0993; ZFYVE25; MGC16461
Homo sapiens	RefSeq	NM_014415.1	ILMN_2971	ZBTB11	NM_014415.2	NM_014415.2		27107	141802307	NM_014415.2	ZBTB11	NP_055230.1	ILMN_1691395	0006040379	S	4801	CAGCTGTGTGGCTGACTTTCAATTTTAAGACGTGAATTGACATACAGCCC	3	-	102851170-102851219	3q12.3a	Homo sapiens zinc finger and BTB domain containing 11 (ZBTB11), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF-U69274; FLJ13426; MGC133303	ZNF-U69274; FLJ13426; MGC133303
Homo sapiens	RefSeq	NM_004399.1	ILMN_306817	DDX11	NM_152438.1	NM_152438.1		1663	132566526	NM_152438.1	DDX11	NP_689651.1	ILMN_1712513	0007100497	A	1885	TTGCAGCCCCTGCAGACGAGAGTCAGGCCAGCACCCTGCGACCAGCTTCT	12	+	31141063-31141112	12p11.21b	Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9013641] [evidence TAS]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [pmid 9013641] [evidence TAS]; Progression through S phase, the part of the mitotic cell cycle during which DNA synthesis takes place [goid 84] [pmid 9013641] [evidence TAS]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 9013641] [evidence TAS]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9013641] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]	CHL1; KRG2; MGC9335; CHLR1; MGC133249	CHL1; KRG2; MGC9335; CHLR1
Homo sapiens	RefSeq	XR_019029.2	ILMN_163129	LOC645181	XR_019029.2	XR_019029.2		645181	169167953	XR_019029.2	LOC645181		ILMN_3217610	0000430382	A	206	CGAAGAAGGTGACTACCAGCAAAAGTGCAAAGGCGTCGAAGGGCTCAGAG				5q14.3c	PREDICTED: Homo sapiens misc_RNA (LOC645181), miscRNA.					
Homo sapiens	RefSeq	XR_019029.2	ILMN_163129	LOC645181	XR_019029.2	XR_019029.2		645181	169167953	XR_019029.2	LOC645181		ILMN_3294130	0004050129	M	688	TCTCCTCTTCATCTTCGCACATAAATTGTTTGGAGGATGTGGTGAGGCGC				5q14.3c	PREDICTED: Homo sapiens misc_RNA (LOC645181), miscRNA.					
Homo sapiens	RefSeq	XM_928021.1	ILMN_32251	LOC643090	XM_928021.1	XM_928021.1		643090	88961387	XM_928021.1	LOC643090	XP_933114.1	ILMN_1728564	0001230685	S	423	TGCAGGCTGTGTTGCTGCTCAAGGAGTGTACGGGAGGGTATCGTAGCCGC	3	-	12924020-12924024:12924025-12924069		PREDICTED: Homo sapiens hypothetical protein LOC643090 (LOC643090), mRNA.					
Homo sapiens	RefSeq	XM_926006.1	ILMN_36682	LOC642509	XM_926006.1	XM_926006.1		642509	89040342	XM_926006.1	LOC642509	XP_931099.1	ILMN_1712325	0006650717	S	121	AATAGTCGGGATATTAATTTGGCATTAGTGGCTCAGTCAGCCCCTGATAT	16	-	34365601-34365650		PREDICTED: Homo sapiens hypothetical protein LOC642509 (LOC642509), mRNA.					
Homo sapiens	RefSeq	NM_001005503.1	ILMN_176077	OR11G2	NM_001005503.1	NM_001005503.1		390439	53828743	NM_001005503.1	OR11G2	NP_001005503.1	ILMN_1660978	0003780463	S	750	CTTCATTGTGGGGTCCTATGCTCTGGTCGTGAGAGCTGTGTTGAGGGTCC	14	+	19736084-19736133	14q11.2a	Homo sapiens olfactory receptor, family 11, subfamily G, member 2 (OR11G2), mRNA.				OR14-34	OR14-34
Homo sapiens	RefSeq	NM_001032281.1	ILMN_17834	TFPI	NM_006287.4	NM_006287.4		7035	98991770	NM_006287.4	TFPI	NP_006278.1	ILMN_1662619	0001340039	A	868	CAATGCTGTGAATAACTCCCTGACTCCGCAATCAACCAAGGTTCCCAGCC	2	-	188348856-188348905	2q32.1f	Homo sapiens tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) (TFPI), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2271516] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2271516] [evidence EXP]	A pathway of blood coagulation in which the earlier stages of the cascade are bypassed and the activation of factor X to factor Xa is effected by the combination of factor VIIa + thromboplastin; this second pathway occurs when tissue extracts are present in optimal amounts and is much more rapid than the intrinsic pathway [goid 7598] [pmid 7598447] [evidence EXP]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	TFI; LACI; EPI	LACI; EPI
Homo sapiens	RefSeq	NM_006287.3	ILMN_17834	TFPI	NM_006287.4	NM_006287.4		7035	98991770	NM_006287.4	TFPI	NP_006278.1	ILMN_1707124	0004850731	I	931	CGGTCCCTCATGGTGTCTCACTCCAGCAGACAGAGGATTGTGTCGTGCCA	2	-	188332602-188332651	2q32.1f	Homo sapiens tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) (TFPI), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2271516] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2271516] [evidence EXP]	A pathway of blood coagulation in which the earlier stages of the cascade are bypassed and the activation of factor X to factor Xa is effected by the combination of factor VIIa + thromboplastin; this second pathway occurs when tissue extracts are present in optimal amounts and is much more rapid than the intrinsic pathway [goid 7598] [pmid 7598447] [evidence EXP]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	TFI; LACI; EPI	LACI; EPI
Homo sapiens	RefSeq	XM_496056.2	ILMN_183704	LOC642397	XR_016431.1	XR_016431.1		642397	113425170	XR_016431.1	LOC642397		ILMN_1677959	0001500370	A	1487	AGAAATACTGCTTACTACACAGTTGGACTCTCTTAAAAGACTTATAAAAA	15	+	28560353-28560402	15q13.2b	PREDICTED: Homo sapiens similar to WAS protein homology region 2 domain containing 1 (LOC642397), mRNA.					
Homo sapiens	RefSeq	Hs.207731	ILMN_5798	MMAB	NM_052845.3	NM_052845.3		326625	120432048	NM_052845.3	MMAB	NP_443077.1	ILMN_1872276	0004150768	S	3751	CTCCCACCCACTGCCGCTTGACAGTCGTTTTAATCACTACCTGGGCTGTG	12	-	109991858-109991907	12q24.11b	Homo sapiens methylmalonic aciduria (cobalamin deficiency) cblB type (MMAB), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 9236] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + cob(I)alamin + H2O = phosphate + diphosphate + adenosylcobalamin [goid 8817] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ATR; MGC20496	
Homo sapiens	RefSeq	NM_001039127.2	ILMN_8930	ZNF718	NM_001039127.2	NM_001039127.2		255403	116686096	NM_001039127.2	ZNF718	NP_001034216.1	ILMN_2131926	0003360537	S	2095	GGGTCTTATTGTGCATATTTCATACTAGAAGAAAGCCCTGAAGCAGTTGC				4p16.3d	Homo sapiens zinc finger protein 718 (ZNF718), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ90036	FLJ90036
Homo sapiens	RefSeq	NM_138634.1	ILMN_19771	MSMB	NM_138634.1	NM_138634.1		4477	20302157	NM_138634.1	MSMB	NP_619540.1	ILMN_2376313	0004150598	A	197	GAGGACTGCAAGTATATCGTGGTGGAGAAGAAGGACCCAAAAAAGACCTG	10	+	51232332-51232381	10q11.23b	Homo sapiens microseminoprotein, beta- (MSMB), transcript variant PSP57, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7566962] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7566962] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MSP; PRPS; MSPB; PN44; IGBF; PSP94; PSP57; PSP-94; PSP	MSPB; IGBF; MSP; PRPS; PN44; PSP94; PSP57; PSP-94; PSP
Homo sapiens	RefSeq	XM_936393.1	ILMN_32061	LOC642245	XM_936393.1	XM_936393.1		642245	88971798	XM_936393.1	LOC642245	XP_941486.1	ILMN_1751146	0003400100	S	454	CGCGGCGGGAATGGTTGGCCCTGGGAAACCCGCGATGGCGTCCTGAGTAA					PREDICTED: Homo sapiens similar to transmembrane 4 L six family member 19 (LOC642245), mRNA.					
Homo sapiens	RefSeq	NM_012351.1	ILMN_15310	OR10J1	NM_012351.1	NM_012351.1		26476	6912549	NM_012351.1	OR10J1	NP_036483.1	ILMN_1809964	0002260367	S	459	CCAACTTGTCCTGGGGGCCTGCAGCATTGGGCTGATTGTAGCAATAACGC	1	+	157676631-157676680	1q23.2b	Homo sapiens olfactory receptor, family 10, subfamily J, member 1 (OR10J1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1370859] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 1370859] [evidence TAS]; The union of male and female gametes to form a zygote [goid 7338] [pmid 1370859] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	MGC138495; MGC138497; HSHGMP07J; HGMP07J	MGC138495; MGC138497; HSHGMP07J; HGMP07J
Homo sapiens	RefSeq	XM_937661.1	ILMN_308041	DTX4	NM_015177.1	NM_015177.1		23220	148237497	NM_015177.1	DTX4	NP_055992.1	ILMN_1653678	0007150347	A	1817	GAAGAGTTTCAGCGCCCGAGGCTTCCCACGACACTGTTACCTTCCGGACA	11	+	58723756-58723805	11q12.1c	Homo sapiens deltex homolog 4 (Drosophila) (DTX4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0937; MGC141899; RNF155	
Homo sapiens	RefSeq	NM_079836.1	ILMN_177408	TUBA3C	NM_006001.1	NM_006001.1		7278	17921992	NM_006001.1	TUBA3C	NP_005992.1	ILMN_1679482	0000160348	A	1081	AGATTGGTGCCCAACTGGATTTAAGGTGGGCATTAACTACCAGCCCCCCA	13	-	19748274-19748299:19751067-19751090	13q12.11a	Homo sapiens tubulin, alpha 3c (TUBA3C), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence NAS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence NAS]	TUBA2; bA408E5.3	TUBA2; bA408E5.3
Homo sapiens	RefSeq	NM_198699.1	ILMN_3360	KRTAP10-12	NM_198699.1	NM_198699.1		386685	38490586	NM_198699.1	KRTAP10-12	NP_941972.1	ILMN_1754009	0001030068	S	788	AGTCCAGCTGCTGCCAGGCATGTCCCCCAGGGCCACTGGGCACTATGAGT	21	+	44942302-44942351	21q22.3d	Homo sapiens keratin associated protein 10-12 (KRTAP10-12), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KAP10.12; KRTAP18.12; KRTAP18-12	KAP10.12; KRTAP18.12; KRTAP18-12
Homo sapiens	Unigene	Hs.546148	ILMN_109184	HS.546148	Hs.546148		Hs.546148		27469763	BC042023			ILMN_1848916	0001710408	S	1476	GGCAATGGTAACTCTGCCTAGAACATAGTTGAATGTCCTTGGTTGTCGGT	1	-	84104893-84104942		Homo sapiens cDNA clone IMAGE:5312516					
Homo sapiens	RefSeq	NM_033155.1	ILMN_5308	NXF5	NM_032946.1	NM_032946.1		55998	15487659	NM_032946.1	NXF5	NP_116564.1	ILMN_1687265	0001710593	A	1491	GATCTTGCCTTCATGTGGACCTTCATCACTACCTCTGGCCGCAATTCCAG	X	-	100977830-100977830:100978362-100978410	Xq22.1d	Homo sapiens nuclear RNA export factor 5 (NXF5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11566096] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11566096] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 11566096] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 11566096] [evidence IEP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11566096] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11566096] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_003052.2	ILMN_25201	SLC34A1	NM_003052.2	NM_003052.2		6569	31543634	NM_003052.2	SLC34A1	NP_003043.2	ILMN_1659991	0000990082	S	2334	GACTAGGATAGGCAGGAGTAAGGGTGGGTCTGGGTATATGACTGTGCAGC	5	+	176758226-176758275	5q35.3a	Homo sapiens solute carrier family 34 (sodium phosphate), member 1 (SLC34A1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8327470] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 8327470] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [pmid 8327470] [evidence TAS]; The regulated release of a fluid by a cell or group of cells in a multicellular organism [goid 7589] [pmid 8693007] [evidence TAS]; The continuous turnover of bone matrix and mineral that involves first, an increase in resorption (osteoclastic activity) and later, reactive bone formation (osteoblastic activity). The process of bone remodeling takes place in the adult skeleton at discrete foci. The process ensures the mechanical integrity of the skeleton throughout life and plays an important role in calcium homeostasis. An imbalance in the regulation of bone resorption and bone formation results in many of the metabolic bone diseases, such as osteoporosis [goid 46849] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA];  [goid 15321] [pmid 8327470] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NPT2; SLC11; NPTIIa; SLC17A2; NAPI-3	NPT2; SLC11; NPTIIa; SLC17A2; NAPI-3
Homo sapiens	RefSeq	NM_152387.2	ILMN_29157	KCTD18	NM_152387.2	NM_152387.2		130535	45387952	NM_152387.2	KCTD18	NP_689600.2	ILMN_2150187	0003140048	S	2265	CAAGGCGAGCTGCCTACAAATTACTCTGTCTCCAAAGGCAACGTGAAAAG	2	-	201354306-201354355	2q33.1e	Homo sapiens potassium channel tetramerisation domain containing 18 (KCTD18), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ31322; 6530404F10Rik; FLJ37818	FLJ31322; 6530404F10Rik; FLJ37818
Homo sapiens	RefSeq	XM_001722895.1	ILMN_343194	LOC729545	XM_001722895.1	XM_001722895.1		729545	169171041	XM_001722895.1	LOC729545	XP_001722947.1	ILMN_3242293	0007050273	S	514	GTCGGTTCCAGTTATGCCGTTGCTTGAACCCGAGGGCCAGGAAGAACCGC	7	-	76520302-76520351	7q11.23f	PREDICTED: Homo sapiens similar to Williams Beuren syndrome chromosome region 19 pseudogene (LOC729545), mRNA.					
Homo sapiens	RefSeq	XR_038125.1	ILMN_351561	LOC100134591	XR_038125.1	XR_038125.1		100134591	169170399	XR_038125.1	LOC100134591		ILMN_3248472	0000110520	S	933	CTCTCACGCTGAGGGAGGTCAGCTTCATGCCTCTGTTGGCTTCTCCAGGC	7	-	56894564-56894591:56894714-56894735		PREDICTED: Homo sapiens misc_RNA (LOC100134591), miscRNA.					
Homo sapiens	RefSeq	NM_207517.1	ILMN_7295	ADAMTSL3	NM_207517.2	NM_207517.2		57188	145275197	NM_207517.2	ADAMTSL3	NP_997400.2	ILMN_1798690	0005130400	S	6913	GTGATTGGGAATGGATGGGGGACAGTGAGGAGGACACACCAGCCCATTAG	15	+	82499175-82499224	15q25.2b	Homo sapiens ADAMTS-like 3 (ADAMTSL3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC150716; MGC150717; KIAA1233	KIAA1233
Homo sapiens	RefSeq	NM_000095.2	ILMN_15049	COMP	NM_000095.2	NM_000095.2		1311	40217842	NM_000095.2	COMP	NP_000086.2	ILMN_1677636	0002360148	S	2274	AGAGGACTATGAGACCCATCAGCTGCGGCAAGCCTAGGGACCAGGGTGAG	19	-	18893711-18893724:18893725-18893760	19p13.11b	Homo sapiens cartilage oligomeric matrix protein (COMP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 7713493] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 7670472] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 7713493] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 7713493] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 7670472] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC149768; PSACH; MGC131819; EDM1; MED; EPD1; THBS5	MGC149768; PSACH; MGC131819; EDM1; MED; EPD1; THBS5
Homo sapiens	RefSeq	NR_002454.2	ILMN_9207	LOC606724	NR_002454.2	NR_002454.2		606724	73760411	NR_002454.2	LOC606724		ILMN_1731804	0003420053	S	500	TGTGGGATGCCCCCTGACTTACTACATCACAGGAACAGGGCCTTCGTGGG	16	+	29368666-29368715	16p11.2d	Homo sapiens coronin, actin binding protein, 1A pseudogene (LOC606724), non-coding RNA.					
Homo sapiens	RefSeq	NR_002454.2	ILMN_9207	LOC606724	NR_002454.2	NR_002454.2		606724	73760411	NR_002454.2	LOC606724		ILMN_2125747	0005670372	S	198	GAGGAGATGCGGAAGCTCCAGGCCACGGTGCAGGAGCTCCAGAAGCGCTT	16	+	29368364-29368413	16p11.2d	Homo sapiens coronin, actin binding protein, 1A pseudogene (LOC606724), non-coding RNA.					
Homo sapiens	RefSeq	XM_942470.1	ILMN_39578	LOC652803	XM_942470.1	XM_942470.1		652803	89060522	XM_942470.1	LOC652803	XP_947563.1	ILMN_1655529	0006580538	S	1	ATGACCCAAAGCTGGAAACAACCCAGGAGTCCATTGGCAGTTGAAAGGGT					PREDICTED: Homo sapiens similar to long interspersed repetitive DNA sequence LINE4 (L1Rn) (LOC652803), mRNA.					
Homo sapiens	RefSeq	NM_080674.1	ILMN_166400	C20ORF86	XM_001134462.1	XM_001134462.1		140731	113428998	XM_001134462.1	C20orf86	XP_001134462.1	ILMN_1751045	0004040053	S	803	GGGCCTCCATCCACGACAGAGATGCCAAGGGGGAGACCCCCATCTCCATT				20q13.32a	PREDICTED: Homo sapiens chromosome 20 open reading frame 86 (C20orf86), mRNA.					bA196N14.3
Homo sapiens	RefSeq	XM_001714434.1	ILMN_341155	LOC730376	XM_001714434.1	XM_001714434.1		730376	169171736	XM_001714434.1	LOC730376	XP_001714486.1	ILMN_3300802	0005130328	M	965	GGCCCTGCCTCCCAGCAAGCCACTGGGAGGCAGGATGTGGGCCTGAAGAG				7p11.2b	PREDICTED: Homo sapiens hypothetical LOC730376 (LOC730376), mRNA.					
Homo sapiens	RefSeq	XM_001714434.1	ILMN_341155	LOC730376	XM_001714434.1	XM_001714434.1		730376	169171736	XM_001714434.1	LOC730376	XP_001714486.1	ILMN_3224236	0005050324	A	431	CAGCAAGCCACTGGGAGGCAGTATGTGGGCCTGAAGAGCTTGGCTGCAGA				7p11.2b	PREDICTED: Homo sapiens hypothetical LOC730376 (LOC730376), mRNA.					
Homo sapiens	RefSeq	NM_006759.3	ILMN_24416	UGP2	NM_006759.3	NM_006759.3		7360	48255965	NM_006759.3	UGP2	NP_006750.3	ILMN_2389155	0000150706	A	1657	GATATGCTTGAATTGGATCACCTCACAGTTTCAGGAGATGTGACATTTGG	2	+	63970755-63970804	2p15a	Homo sapiens UDP-glucose pyrophosphorylase 2 (UGP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8354390] [evidence EXP]	The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate [goid 6011] [pmid 8631325] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence NAS]	Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence TAS]; Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	UGPP2; pHC379; UDPG; UDPGP2	UGPP2; pHC379; UDPG; UDPGP2
Homo sapiens	RefSeq	XM_941733.1	ILMN_24416	UGP2	NM_006759.3	NM_006759.3		7360	48255965	NM_006759.3	UGP2	NP_006750.3	ILMN_1654340	0002120520	S	270	TTTTTTCTAGAGGAGTCACGCTACAGGGCAGGTCTCTCTTCCTCTCCTGC	2	+	63922787-63922823:63922824-63922836	2p15a	Homo sapiens UDP-glucose pyrophosphorylase 2 (UGP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8354390] [evidence EXP]	The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate [goid 6011] [pmid 8631325] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence NAS]	Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence TAS]; Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	UGPP2; pHC379; UDPG; UDPGP2	
Homo sapiens	RefSeq	NM_006759.3	ILMN_24416	UGP2	NM_006759.3	NM_006759.3		7360	48255965	NM_006759.3	UGP2	NP_006750.3	ILMN_2284181	0001010500	I	195	GGAGAAAGAATACATCGGTTGTTAAAGCAGGAGAGGAAGAGAGACCTGCC	2	+	63922712-63922761	2p15a	Homo sapiens UDP-glucose pyrophosphorylase 2 (UGP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8354390] [evidence EXP]	The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate [goid 6011] [pmid 8631325] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence NAS]	Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence TAS]; Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	UGPP2; pHC379; UDPG; UDPGP2	UGPP2; pHC379; UDPG; UDPGP2
Homo sapiens	RefSeq	NM_006759.3	ILMN_24416	UGP2	NM_006759.3	NM_006759.3		7360	48255965	NM_006759.3	UGP2	NP_006750.3	ILMN_1671969	0003840053	I	1	TGGTTTTACCTTTTCCGGGAGTCTCCAGCTGGCCCTCATTTGTGTCCGGA	2	+	63922518-63922567	2p15a	Homo sapiens UDP-glucose pyrophosphorylase 2 (UGP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8354390] [evidence EXP]	The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate [goid 6011] [pmid 8631325] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence NAS]	Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence TAS]; Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	UGPP2; pHC379; UDPG; UDPGP2	UGPP2; pHC379; UDPG; UDPGP2
Homo sapiens	RefSeq	NM_006759.3	ILMN_24416	UGP2	NM_006759.3	NM_006759.3		7360	48255965	NM_006759.3	UGP2	NP_006750.3	ILMN_2389151	0003930035	A	1466	TGCCAAGGAGCCGTTTTCTGCCTGTCAAAACCACATCAGATCTCTTGCTG	2	+	63968128-63968177	2p15a	Homo sapiens UDP-glucose pyrophosphorylase 2 (UGP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8354390] [evidence EXP]	The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate [goid 6011] [pmid 8631325] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence NAS]	Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence TAS]; Catalysis of the reaction: UTP + alpha-D-glucose 1-phosphate = diphosphate + UDP-glucose [goid 3983] [pmid 8354390] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	UGPP2; pHC379; UDPG; UDPGP2	UGPP2; pHC379; UDPG; UDPGP2
Homo sapiens	RefSeq	XM_001719045.1	ILMN_334678	LOC100129826	XM_001719045.1	XM_001719045.1		100129826	169202487	XM_001719045.1	LOC100129826	XP_001719097.1	ILMN_3252785	0001030307	M	709	GGGGTCTGAGCAAATCCTTCCTATGCCGTCTGAGCACATCCTCCCCAAGC	11	+	1954395-1954444	11p15.5b	PREDICTED: Homo sapiens hypothetical protein LOC100129826 (LOC100129826), mRNA.					
Homo sapiens	RefSeq	NM_005667.2	ILMN_17861	RNF103	NM_005667.2	NM_005667.2		7844	37595534	NM_005667.2	RNF103	NP_005658.1	ILMN_1692199	0006580332	S	2995	CACCAGCCCTTGTCAAATGATGTCCCATCTTAACCATGTGCAATTTGTCC	2	-	86830948-86830965:86830966-86830997	2p11.2e	Homo sapiens ring finger protein 103 (RNF103), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9070305] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC41857; hkf-1; ZFP103; KF1; MGC102815	MGC41857; hkf-1; ZFP103; KF1; MGC102815
Homo sapiens	RefSeq	NM_020746.2	ILMN_22608	VISA	NM_020746.2	NM_020746.2		57506	83776597	NM_020746.2	VISA	NP_065797.2	ILMN_2131493	0006900020	S	2718	TAGAGCTGAGGGCATGAGAGGCAGAGTGCACAGTGGTCAAGGGTGCAGCT	20	+	3795755-3795804	20p13b	Homo sapiens virus-induced signaling adapter (VISA), mRNA.				IPS-1; FLJ27482; CARDIF; FLJ41962; MAVS; DKFZp666M015; KIAA1271	IPS-1; CARDIF; FLJ41962; MAVS; DKFZp666M015; KIAA1271; FLJ27482
Homo sapiens	RefSeq	XM_001721880.1	ILMN_350561	LOC727895	XM_001721880.1	XM_001721880.1		727895	169206022	XM_001721880.1	LOC727895	XP_001721932.1	ILMN_3217149	0002690280	A	475	AGCTACCACGGGGGTCTGTGCCTCCGCTTCCAGGACCAGCACATCACCGT				13q12.11a	PREDICTED: Homo sapiens hypothetical LOC727895 (LOC727895), mRNA.					
Homo sapiens	RefSeq	XM_001721880.1	ILMN_350561	LOC727895	XM_001721880.1	XM_001721880.1		727895	169206022	XM_001721880.1	LOC727895	XP_001721932.1	ILMN_3233993	0001260176	I	785	CTGCCGCTTTGACAGTCCCTAGCAGTCGCGGTCCAGATGATGGTGGGAGC				13q12.11a	PREDICTED: Homo sapiens hypothetical LOC727895 (LOC727895), mRNA.					
Homo sapiens	RefSeq	NM_006258.1	ILMN_307941	PRKG1	NM_001098512.1	NM_001098512.1		5592	148612817	NM_001098512.1	PRKG1	NP_001091982.1	ILMN_1693519	0006290082	S	3107	AAATGCTTGGGGTAGGGTGGAGTGGGGAGGGATTAAAACCCATCCAAAAA	10	+	53723652-53723666:53723667-53723701	10q11.23c-q21.1a	Homo sapiens protein kinase, cGMP-dependent, type I (PRKG1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2792381] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10851246] [evidence TAS]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2792381] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10851246] [evidence TAS]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cGMP [goid 4692] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cGMP [goid 4692] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cGMP [goid 4692] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cGMP [goid 4692] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]	FLJ36117; PGK; cGKI-alpha; MGC71944; CGKI; PRKG1B; cGKI-BETA; PRKGR1B; DKFZp686K042	PGK; cGKI-alpha; MGC71944; CGKI; PRKG1B; cGKI-BETA; PRKGR1B
Homo sapiens	RefSeq	NM_005552.3	ILMN_22293	KLC1	NM_005552.4	NM_005552.4		3831	110735429	NM_005552.4	KLC1	NP_005543.2	ILMN_1654653	0001510736	I	2440	GCTCGGACTCCGGGTCTCCCTAGGATATGCCCCAGTAGCATTTGCTGTGT	14	+	103222158-103222207	14q32.33a	Homo sapiens kinesin light chain 1 (KLC1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence ISS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IEA]	The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IEA]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11238452] [evidence IPI]	KLC1; KLC; KNS2; KNS2A; MGC15245	KLC1; KLC; hKLC1J; hKLC1G; hKLC1B; hKLC1R; KNS2A; hKLC1S; hKLC1P; hKLC1N
Homo sapiens	RefSeq	NM_182923.2	ILMN_22293	KLC1	NM_005552.4	NM_005552.4		3831	110735429	NM_005552.4	KLC1	NP_005543.2	ILMN_1726901	0004250706	A	1874	TGAGAGCCTCAACGTGGACGTGGTCAAGTACGAGAGTGGCCCTGACGGAG	14	+	103215551-103215600	14q32.33a	Homo sapiens kinesin light chain 1 (KLC1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence ISS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IEA]	The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IEA]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11238452] [evidence IPI]	KLC1; KLC; KNS2; KNS2A; MGC15245	KLC1; KLC; hKLC1J; hKLC1G; hKLC1B; hKLC1R; KNS2A; hKLC1S; hKLC1P; hKLC1N
Homo sapiens	RefSeq	NM_016943.2	ILMN_26786	TAS2R3	NM_016943.2	NM_016943.2		50831	67944636	NM_016943.2	TAS2R3	NP_058639.1	ILMN_1718253	0000070703	S	707	GCAAAATGGGACAAGCTCCAGAGATCCAACCACTGAGGCCCACAAGAGGG	7	+	141111072-141111121	7q34e	Homo sapiens taste receptor, type 2, member 3 (TAS2R3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10761934] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10761934] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [pmid 10761934] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 10761934] [evidence TAS]	T2R3	T2R3
Homo sapiens	Unigene	Hs.573021	ILMN_125202	HS.573021	Hs.573021		Hs.573021		11328368	BF366239			ILMN_1867546	0002320242	S	38	GGTAGACAATGGGTGAGGAGGTGACTGAAATTGGAACAGTGGAAGGACCC	3	+	172668602-172668651		IL2-NT0102-160600-105-C03 NT0102 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_004364.2	ILMN_165058	CEBPA	NM_004364.2	NM_004364.2		1050	28872793	NM_004364.2	CEBPA	NP_004355.2	ILMN_1715715	0001430280	S	2050	GCCCCAGCAGTGCCTTGTGCAATGTGAATGTGCGCGTCTCTGCTAAACCA	19	-	38483061-38483110	19q13.11b	Homo sapiens CCAAT/enhancer binding protein (C/EBP), alpha (CEBPA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7575576] [evidence NAS]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 8643605] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 15664994] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 7575576] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8643605] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15664994] [evidence NAS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [pmid 15664994] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 7575576] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15664994] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	CEBP; C/EBP-alpha	CEBP; C/EBP-alpha
Homo sapiens	RefSeq	NM_001080538.1	ILMN_163029	AKR1B15	NM_001080538.1	NM_001080538.1		441282	122937515	NM_001080538.1	AKR1B15	NP_001074007.1	ILMN_2278335	0002760274	I	858	GGCAACCATACTCAGCTTCAACAGAAACTGGAGGGCCTTTGACTTCAAGG	7	+	133913028-133913077	7q33b	Homo sapiens aldo-keto reductase family 1, member B15 (AKR1B15), mRNA.					
Homo sapiens	RefSeq	XM_939119.1	ILMN_32418	LOC650028	XM_939119.1	XM_939119.1		650028	89066138	XM_939119.1	LOC650028	XP_944212.1	ILMN_1775479	0003290497	S	600	TCGGGCAGCTGGCACAGCCTTCATGGGTAAGGAAGAAGGGATCCTGCACA					PREDICTED: Homo sapiens similar to voltage-gated sodium channel type V alpha isoform b (LOC650028), mRNA.					
Homo sapiens	RefSeq	NM_145047.3	ILMN_19554	C1ORF102	NM_145047.3	NM_145047.3		127700	45643132	NM_145047.3	C1orf102	NP_659484.3	ILMN_1658206	0006550554	I	1112	GTTATCAACATACAAGCCACCCAGGACCAGCAACGGAGCGAGGAGCTGGC	1	-	36656417-36656443:36657179-36657201	1p34.3d	Homo sapiens chromosome 1 open reading frame 102 (C1orf102), transcript variant 1, mRNA.				NOR1; MGC26685; OSCP1	NOR1; MGC26685; OSCP1
Homo sapiens	RefSeq	NM_206999.1	ILMN_25765	CNOT1	NM_206999.1	NM_206999.1		23019	46275836	NM_206999.1	CNOT1	NP_996882.1	ILMN_1677840	0004780154	I	4731	AGTTGGCTATTTCCTTGGTATAGGTACAAAACGTATTACTGCTTGTCTGT	16	-	58577457-58577506	16q21a	Homo sapiens CCR4-NOT transcription complex, subunit 1 (CNOT1), transcript variant 2, mRNA.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		FLJ90644; DKFZp686O168; NOT1H; FLJ36492; DKFZp686E0722; CDC39; AD-005; NOT1; KIAA1007	FLJ90644; DKFZp686O168; NOT1H; FLJ36492; DKFZp686E0722; CDC39; AD-005; NOT1; KIAA1007
Homo sapiens	RefSeq	NM_206999.1	ILMN_25765	CNOT1	NM_206999.1	NM_206999.1		23019	46275836	NM_206999.1	CNOT1	NP_996882.1	ILMN_1682501	0003180576	A	4571	GGATTTTGCCCTGGATTCGGAGGAATCTCGAATGCGAATAGCAGCTCATC	16	-	58577617-58577666	16q21a	Homo sapiens CCR4-NOT transcription complex, subunit 1 (CNOT1), transcript variant 2, mRNA.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		FLJ90644; DKFZp686O168; NOT1H; FLJ36492; DKFZp686E0722; CDC39; AD-005; NOT1; KIAA1007	FLJ90644; DKFZp686O168; NOT1H; FLJ36492; DKFZp686E0722; CDC39; AD-005; NOT1; KIAA1007
Homo sapiens	RefSeq	NM_203459.1	ILMN_14735	CAMSAP1L1	NM_203459.1	NM_203459.1		23271	44955928	NM_203459.1	CAMSAP1L1	NP_982284.1	ILMN_1792660	0006280209	S	7173	GGTTTCATGGACACTGTTGAGCAATGTACAGTGTATGGTGTGCTTACCTG	1	+	199096276-199096325	1q32.1b	Homo sapiens calmodulin regulated spectrin-associated protein 1-like 1 (CAMSAP1L1), mRNA.				KIAA1078; MGC150681; MGC150680; RP11-93N17.1	KIAA1078; MGC150681; MGC150680; RP11-93N17.1
Homo sapiens	RefSeq	NM_001017405.1	ILMN_4828	MAEA	NM_001017405.1	NM_001017405.1		10296	62953130	NM_001017405.1	MAEA	NP_001017405.1	ILMN_1689257	0002340671	I	500	TTGAGATGTTCCTGACGGCCAAAGAGGTGGAGGAGTCCCTGGAGAGGCGT	4	+	1299303-1299352	4p16.3c	Homo sapiens macrophage erythroblast attacher (MAEA), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9763581] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 16510120] [evidence IDA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [pmid 16510120] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 16510120] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9763581] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 16510120] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9763581] [evidence IDA]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [pmid 16510120] [evidence NAS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptosis [goid 33033] [pmid 9763581] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 16510120] [evidence IDA]	EMLP; HLC-10; EMP; PIG5	EMLP; HLC-10; EMP; PIG5
Homo sapiens	Unigene	Hs.160572	ILMN_79702	HS.160572	Hs.160572		Hs.160572		10433413	AK022092			ILMN_1901555	0001980435	S	1643	GTGAAGGGGACATGGAGGTTAAGCAAGGCCAGAAAGACAGAGACGTCCTC	10	+	131483663-131483712		Homo sapiens cDNA FLJ12030 fis, clone HEMBB1001868					
Homo sapiens	RefSeq	XM_943661.1	ILMN_32247	LRRC38	XM_943661.2	XM_943661.2		126755	113411942	XM_943661.2	LRRC38	XP_948754.2	ILMN_1803801	0001990014	A	1856	AAGAAATCAGCTGCCCATGAACCGAGAAGCAGGCCCTCACCAGAACCCAG				1p36.21c	PREDICTED: Homo sapiens leucine rich repeat containing 38 (LRRC38), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_017458.2	ILMN_165401	MVP	NM_017458.2	NM_017458.2		9961	19913409	NM_017458.2	MVP	NP_059447.2	ILMN_2344373	0000160291	A	2324	TTGAGGGAGAAGGGTCCGTGCTGCAGGCCAAGCTAAAAGCACAGGCCTTG	16	+	29765045-29765094	16p11.2d	Homo sapiens major vault protein (MVP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7585126] [evidence TAS]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7585126] [evidence TAS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 7585126] [evidence TAS]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	LRP; VAULT1	LRP; VAULT1
Homo sapiens	RefSeq	XM_932259.1	ILMN_38675	DKFZP686J0529	XM_932259.1	XM_932259.1		388468	89044047	XM_932259.1	DKFZp686J0529	XP_937352.1	ILMN_1765945	0003990445	I	5435	GGCAGCTAGGGAGAAAGGCAACATCACCTGCAAAGGGAATTCCATCAGAC	18	-	14497938-14497987	18p11.21b	PREDICTED: Homo sapiens hypothetical protein DKFZp686J0529, transcript variant 2 (DKFZp686J0529), mRNA.					
Homo sapiens	RefSeq	NM_001303.2	ILMN_21275	COX10	NM_001303.2	NM_001303.2		1352	17921981	NM_001303.2	COX10	NP_001294.2	ILMN_1670901	0003930053	S	2855	CTTCCCTCTTGGCTGCCCCCAGGTATTTACTGTGGAGAACATTGCATAGG	17	+	14052574-14052623	17p12b	Homo sapiens COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast) (COX10), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 14607829] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12928484] [evidence RCA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments [goid 266] [evidence IEA]; The transfer of electrons from cytochrome c to oxygen that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex IV [goid 6123] [pmid 12928484] [evidence IC ]; The chemical reactions and pathways resulting in the formation of heme a, a derivative of heme found in cytochrome aa3 [goid 6784] [pmid 12928484] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase), the terminal member of the respiratory chain of the mitochondrion and some aerobic bacteria. Cytochrome c oxidases are multi-subunit enzymes containing from 13 subunits in the mammalian mitochondrial form to 3-4 subunits in the bacterial forms [goid 8535] [pmid 14607829] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [evidence IEA]; The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions [goid 17004] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [pmid 12928484] [evidence IMP];  [goid 8495] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_018486.1	ILMN_2001	HDAC8	NM_018486.1	NM_018486.1		55869	8923768	NM_018486.1	HDAC8	NP_060956.1	ILMN_1651544	0004760241	S	1352	GGCACCCCAGAGTCCTCAACTGGACCTAGGGGAAGAAGGAGATATCCCAC	X	-	71684438-71684487	Xq13.1e	Homo sapiens histone deacetylase 8 (HDAC8), mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 10748112] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12711221] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10748112] [evidence TAS]; The formation or destruction of chromatin structures [goid 6333] [pmid 10748112] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12711221] [evidence TAS]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 12711221] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RPD3; HDACL1	RPD3; HDACL1
Homo sapiens	RefSeq	NM_020370.1	ILMN_10766	GPR84	NM_020370.1	NM_020370.1		53831	9966838	NM_020370.1	GPR84	NP_065103.1	ILMN_1785345	0002070646	S	1181	GCATCAACCCTGTGCTCTATGCAGCCATGAACCGCCAATTCCGCCAAGCA	12	-	54756495-54756544	12q13.13f	Homo sapiens G protein-coupled receptor 84 (GPR84), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	GPCR4; EX33	GPCR4; EX33
Homo sapiens	RefSeq	XM_001719081.1	ILMN_352699	LOC100133803	XM_001719081.1	XM_001719081.1		100133803	169161665	XM_001719081.1	LOC100133803	XP_001719133.1	ILMN_3234547	0005560747	I	711	CCCTATGATGGTGGTTATGGATCTGGTGGTGGGAGTGGTAGATATGGTAG					PREDICTED: Homo sapiens similar to mCG50656 (LOC100133803), mRNA.					
Homo sapiens	RefSeq	NM_153007.3	ILMN_4357	ODF4	NM_153007.3	NM_153007.3		146852	31559788	NM_153007.3	ODF4	NP_694552.1	ILMN_1783656	0001190201	S	977	CCAAGTTCTGTCCATTCATCTGACCCCATCTCCTCATCCTCCCCCAGCCC	17	+	8189916-8189965	17p13.1c	Homo sapiens outer dense fiber of sperm tails 4 (ODF4), mRNA.	Structure or material found in the flagella of mammalian sperm that surrounds each of the nine microtubule doublets, giving a 9 + 9 + 2 arrangement rather than the 9 + 2 pattern usually seen. These dense fibers are stiff and noncontractile [goid 1520] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		MGC138215; MGC138219; OPPO1	MGC138215; MGC138219; OPPO1
Homo sapiens	RefSeq	XM_938451.1	ILMN_10291	GPR173	NM_018969.3	NM_018969.3		54328	34147565	NM_018969.3	GPR173	NP_061842.1	ILMN_1774813	0006220703	A	1485	TCCAGCCCCAGCCCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACA	X	+	53123755-53123804	Xp11.22a	Homo sapiens G protein-coupled receptor 173 (GPR173), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10833454] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SREB3	
Homo sapiens	RefSeq	NM_018969.3	ILMN_10291	GPR173	NM_018969.3	NM_018969.3		54328	34147565	NM_018969.3	GPR173	NP_061842.1	ILMN_1676447	0000010671	I	85	CCGGGCTGTGATTTACCTGGGTGAGACAGCTTGAGCCCCATCGTGGATTC	X	+	53095315-53095364	Xp11.22a	Homo sapiens G protein-coupled receptor 173 (GPR173), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10833454] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SREB3	SREB3
Homo sapiens	RefSeq	NM_018969.3	ILMN_10291	GPR173	NM_018969.3	NM_018969.3		54328	34147565	NM_018969.3	GPR173	NP_061842.1	ILMN_2298028	0002320706	I	1495	GCCCCTCGAACCACCTGTAATCTAGGCACCTTTGCCAACACCTCCCAAGG	X	+	53123765-53123814	Xp11.22a	Homo sapiens G protein-coupled receptor 173 (GPR173), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10833454] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SREB3	SREB3
Homo sapiens	Unigene	Hs.436679	ILMN_91763	HS.436679	Hs.436679		Hs.436679		9706853	BE504445			ILMN_1911361	0003990576	S	276	GTGCTGCACCTTCACGTCTGAGTGGCAGTTGTAATATGAAGGGGAAGAGG	2	+	19325274-19325323		hz86f02.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3214875 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022443.2	ILMN_22190	MLF1	NM_022443.2	NM_022443.2		4291	33636694	NM_022443.2	MLF1	NP_071888.1	ILMN_1684439	0005870133	S	783	CTGGCTCCCGAGAACTTAAAAGAAGGGAGAAACCTCAACAAAGTCCAGCC	3	+	159803398-159803422:159805580-159805604	3q25.32b	Homo sapiens myeloid leukemia factor 1 (MLF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The process whereby a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages [goid 2318] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages [goid 2318] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 15861129] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence ISS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 12176995] [evidence IDA]		
Homo sapiens	RefSeq	XM_496558.2	ILMN_38326	LOC440871	XM_496558.2	XM_496558.2		440871	88953286	XM_496558.2	LOC440871	XP_496558.1	ILMN_1706536	0000050082	S	401	CTAGATTTTACCAGCTGCTTCCTTTACAGACAGCTAATGTGGCCACTCAG	2	+	87419720-87419769	2p11.2d	PREDICTED: Homo sapiens similar to Ig kappa chain V-III region VH precursor (LOC440871), mRNA.					
Homo sapiens	Unigene	Hs.176498	ILMN_80530	HS.176498	Hs.176498		Hs.176498		51474918	XM_059047			ILMN_1868866	0001660056	S	437	CGGGATCCGCCGGCTGCCTCCATCCCAGAAGAGTGCGCAGAGAATTAAAT					PREDICTED: Homo sapiens hypothetical LOC126435 (LOC126435), mRNA					
Homo sapiens	RefSeq	NM_001005161.1	ILMN_163109	OR52B4	NM_001005161.2	NM_001005161.2		143496	94967011	NM_001005161.2	OR52B4	NP_001005161.2	ILMN_1776846	0004850039	S	763	GGGTCTGGCATCTTCACAATCCTTACCCAGAGGTTTGGACGCCACATTCC	11	-	4388713-4388762	11p15.4d	Homo sapiens olfactory receptor, family 52, subfamily B, member 4 (OR52B4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-3	OR11-3
Homo sapiens	RefSeq	XR_037633.1	ILMN_349468	LOC100132101	XR_037633.1	XR_037633.1		100132101	169208509	XR_037633.1	LOC100132101		ILMN_3247050	0005570019	S	677	CTATAGCTATCCAGGGCGCGGGTCGAAGCATTGCTTGGTCATCGTGTTCT	15	+	20929982-20930007:20939730-20939753	15q11.2c	PREDICTED: Homo sapiens misc_RNA (LOC100132101), miscRNA.					
Homo sapiens	RefSeq	XM_929282.1	ILMN_39634	LOC646350	XM_929282.1	XM_929282.1		646350	89041361	XM_929282.1	LOC646350	XP_934375.1	ILMN_1738607	0006130427	S	92	TTGGTAATAAAATCAGGTACAACTCCAAAAGGAGACATTGGAGAAGAACC	17	+	30917740-30917789		PREDICTED: Homo sapiens similar to 60S ribosomal protein L39 (LOC646350), mRNA.					
Homo sapiens	RefSeq	NM_007015.2	ILMN_14680	LECT1	NM_007015.2	NM_007015.2		11061	59806341	NM_007015.2	LECT1	NP_008946.1	ILMN_1722527	0005890215	A	805	CCACGGAGCAACCCAGGCGCTGGAAGACTGAATAATGAAACCAGACCCAG	13	-	53282716-53282765	13q14.3d-q21.1a	Homo sapiens leukocyte cell derived chemotaxin 1 (LECT1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [pmid 10103018] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30948] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30948] [evidence IEA]		CHM-I; CHM1; BRICD3	CHM-I; CHM1; BRICD3
Homo sapiens	RefSeq	NM_001012986.1	ILMN_16889	LOC388910	NM_001012986.1	NM_001012986.1		388910	61175250	NM_001012986.1	LOC388910	NP_001013004.1	ILMN_1697373	0001660164	S	311	TTCACAAAGAGGATGCAGCCCCACCTCCCAGCGGGAGTCAGTTCTGCTCT	22	+	43346584-43346633	22q13.31b	Homo sapiens hypothetical LOC388910 (LOC388910), mRNA.					
Homo sapiens	RefSeq	XM_941085.1	ILMN_1131	BEND4	NM_207406.2	NM_207406.2		389206	148762949	NM_207406.2	BEND4	NP_997289.2	ILMN_1796574	0004260291	A	1875	GCGGCCTTGGGAAAAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGGTCCC	4	-	41816870-41816919	4p13d	Homo sapiens BEN domain containing 4 (BEND4), mRNA.				MGC157807; FLJ35632; MGC157808; FLJ43965	
Homo sapiens	RefSeq	NM_207406.2	ILMN_1131	BEND4	NM_207406.2	NM_207406.2		389206	148762949	NM_207406.2	BEND4	NP_997289.2	ILMN_3237256	0004810750	S	8281	CTGGAACTTCATGTAGCAGCCTAACACCGGGGCCGAGTTGCCTTTACTCT	4	-	41808146-41808195	4p13d	Homo sapiens BEN domain containing 4 (BEND4), mRNA.				MGC157807; FLJ35632; MGC157808; FLJ43965	FLJ35632; FLJ43965
Homo sapiens	RefSeq	NM_207406.1	ILMN_1131	BEND4	NM_207406.2	NM_207406.2		389206	148762949	NM_207406.2	BEND4	NP_997289.2	ILMN_1740094	0000430279	A	1888	AAGGAAAAGGTCAGTGCAGTCAGGAGAGACAGGTCCCGAAAGACGCCCTC	4	-	41816857-41816906	4p13d	Homo sapiens BEN domain containing 4 (BEND4), mRNA.				MGC157807; FLJ35632; MGC157808; FLJ43965	FLJ35632; FLJ43965
Homo sapiens	RefSeq	NR_004054.1	ILMN_348058	SNORD103A	NR_004054.1	NR_004054.1		692234	161086944	NR_004054.1	SNORD103A		ILMN_3234751	0004760121	S	2	TGTCTGGCAATGATGACCCACTTGCCCTCACTGAGAACAAAGTTCGGTAA	1	-	31408572-31408621		Homo sapiens small nucleolar RNA, C/D box 103A (SNORD103A), small nucleolar RNA.				U103	U103
Homo sapiens	RefSeq	XR_039155.1	ILMN_338689	LOC645001	XR_039155.1	XR_039155.1		645001	169213911	XR_039155.1	LOC645001		ILMN_3280170	0002350386	M	549	CAAGAGATACCTAGTGCTTCATCCAGCCAAAGAGATCAAAGCAGTTCTGG				19q13.2c	PREDICTED: Homo sapiens misc_RNA (LOC645001), miscRNA.					
Homo sapiens	RefSeq	XR_039155.1	ILMN_338689	LOC645001	XR_039155.1	XR_039155.1		645001	169213911	XR_039155.1	LOC645001		ILMN_3203666	0005720110	A	853	GCTCTGGCCCCTATAGTGGTGGAGGCCAATATTTGCCAAACCACGAAACC				19q13.2c	PREDICTED: Homo sapiens misc_RNA (LOC645001), miscRNA.					
Homo sapiens	RefSeq	XM_372447.3	ILMN_33331	LOC390282	XM_372447.3	XM_372447.3		390282	89035232	XM_372447.3	LOC390282	XP_372447.3	ILMN_1657147	0000460762	A	13	CAGGGCCCCAGGGAATGCATCAAGAAGGGAAAGTGGGAACCAGAGCCGCA	12	-	5012486-5012535	12p13.32a	PREDICTED: Homo sapiens similar to eukaryotic translation initiation factor 3, subunit 5 (epsilon) (LOC390282), mRNA.					
Homo sapiens	RefSeq	NR_003026.1	ILMN_169710	SNORA1	NR_003026.1	NR_003026.1		677792	93352542	NR_003026.1	SNORA1		ILMN_3245893	0004560228	S	71	AGGTTATGCTTCCATCACAGTATGCATATTGCAGTGGTGACAATGAGACC	11	-	93465179-93465228	11q21a	Homo sapiens small nucleolar RNA, H/ACA box 1 (SNORA1), small nucleolar RNA.				ACA1	ACA1
Homo sapiens	RefSeq	NM_006051.2	ILMN_14368	APBB3	NM_133172.2	NM_133172.2		10307	95147535	NM_133172.2	APBB3	NP_573418.2	ILMN_1740772	0004120279	A	1930	GCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCC	5	-	139938025-139938074	5q31.3b	Homo sapiens amyloid beta (A4) precursor protein-binding, family B, member 3 (APBB3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10081969] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10081969] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC87674; SRA; MGC150555; FE65L2	MGC87674; SRA; FE65L2
Homo sapiens	RefSeq	NM_152447.2	ILMN_22036	LRFN5	NM_152447.2	NM_152447.2		145581	31542243	NM_152447.2	LRFN5	NP_689660.2	ILMN_2139125	0000520673	S	2761	CACAGAGGCTGGAGTTAATCTGAAGAGCACCACTTCTCCTCTCTCTCCTG	14	+	41437910-41437913:41443111-41443128:41443129-41443156	14q21.2a	Homo sapiens leucine rich repeat and fibronectin type III domain containing 5 (LRFN5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C14orf146; DKFZp686G0210; FIGLER8; FLJ30803	C14orf146; DKFZp686G0210; FIGLER8; FLJ30803
Homo sapiens	RefSeq	XR_038164.1	ILMN_344366	LOC100130141	XR_038164.1	XR_038164.1		100130141	169218216	XR_038164.1	LOC100130141		ILMN_3187317	0004010722	A	1465	GGCAGCCACTCACCGGTGTCGGTCTTCCCAGCTTCGTGCCATGTGGCCAA					PREDICTED: Homo sapiens misc_RNA (LOC100130141), miscRNA.					
Homo sapiens	RefSeq	NM_152477.2	ILMN_21123	ZNF565	NM_152477.2	NM_152477.2		147929	46358359	NM_152477.2	ZNF565	NP_689690.2	ILMN_1752380	0002600301	S	2305	TGAACTCCAGCGGCCTCATCACCAGCTTCAAGAATTATCAGCTCATGGCC	19	-	41360496-41360545	19q13.12b	Homo sapiens zinc finger protein 565 (ZNF565), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ36991	FLJ36991
Homo sapiens	RefSeq	XM_930829.1	ILMN_42429	LOC642450	XM_930829.1	XM_930829.1		642450	89060015	XM_930829.1	LOC642450	XP_935922.1	ILMN_1773958	0003370348	S	417	CAGATCAGGGCCGCCACCAGGCTCCCGAGCCATGGCTTCCTGTCCGGGAA	X	-	114876010-114876059	Xq23d	PREDICTED: Homo sapiens hypothetical LOC642450 (LOC642450), mRNA.					
Homo sapiens	Unigene	Hs.577207	ILMN_129388	HS.577207	Hs.577207		Hs.577207		51651581	CR744189			ILMN_1817220	0003140468	S	176	AGCAGGAGATAGAAGGAACACAGGGGAGGCAGGAGAGCAAGGCTGTTGCC	11	-	13032976-13033025		CR744189 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGp971M1891 ; IMAGE:2161000 5, mRNA sequence					
Homo sapiens	RefSeq	NM_006438.2	ILMN_175473	COLEC10	NM_006438.2	NM_006438.2		10584	18105033	NM_006438.2	COLEC10	NP_006429.1	ILMN_1662962	0006380356	S	1579	GTAGGTGCTTTGAACCCCTTTCTGTAGGCTCACACCTTAATCTCAGGCCC	8	+	120188281-120188330	8q24.12b	Homo sapiens collectin sub-family member 10 (C-type lectin) (COLEC10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10224141] [evidence IDA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [pmid 12450124] [evidence ISS]	MGC118794; CLL1; MGC118795	MGC118794; CLL1; MGC118795
Homo sapiens	RefSeq	NM_005871.2	ILMN_27698	SMNDC1	NM_005871.2	NM_005871.2		10285	21361283	NM_005871.2	SMNDC1	NP_005862.1	ILMN_1691789	0006520605	S	1838	CAGGTTGTCTGCATTTGTTGGTGTAAGTGAACATCATCACAGTTATCCTG	10	-	112042919-112042968	10q25.2a	Homo sapiens survival motor neuron domain containing 1 (SMNDC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9817934] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9731529] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 9731529] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9817934] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9731529] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15494309] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15494309] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9731529] [evidence TAS]	SPF30; SMNR	SPF30; SMNR
Homo sapiens	RefSeq	NM_001100879.1	ILMN_353132	ST20	NM_001100879.1	NM_001100879.1		400410	154959416	NM_001100879.1	ST20	NP_001094349.1	ILMN_3301818	0001170091	M	679	CAATGGCGCGATCTCGGCTCACTGCAACCTCTGTCTCCCAGGTTCAGGAA	15	-	80191464-80191467:80199971-80200015:80200016-80200016	15q25.1b	Homo sapiens suppressor of tumorigenicity 20 (ST20), transcript variant 1, mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]		HCCS-1	HCCS-1
Homo sapiens	RefSeq	XM_001717780.1	ILMN_349200	LOC100133263	XM_001717780.1	XM_001717780.1		100133263	169166085	XM_001717780.1	LOC100133263	XP_001717832.1	ILMN_3292122	0002260088	M	425	TCCATCGAAGCGCATCTGCATCTGCGGGAGGGGGAAGCGGGGATTGGCAG				3q22.1b	PREDICTED: Homo sapiens hypothetical protein LOC100133263 (LOC100133263), mRNA.					
Homo sapiens	RefSeq	NM_001011724.1	ILMN_3171	HNRNPA1L2	NM_001011724.1	NM_001011724.1		144983	58761495	NM_001011724.1	HNRNPA1L2	NP_001011724.1	ILMN_1736894	0001050736	A	979	TGAAGCAGCTTCATATCTAAGATCTCTGGTGGACTTTTTCTGCCCGTGGA	7	+	52109575-52109582:52114542-52114583	13q14.3d	Homo sapiens heterogeneous nuclear ribonucleoprotein A1-like 2 (HNRNPA1L2), transcript variant 1, mRNA.				MGC102957	MGC102957
Homo sapiens	RefSeq	NM_001093733.2	ILMN_309778	LOC645296	NM_001093733.2	NM_001093733.2		645296	157676342	NM_001093733.2	LOC645296	NP_001087202.1	ILMN_3234831	0000630035	S	200	ACAGTGTGTACCATTCCGACATTACAACGGTGGAGTTGGCAGGTGTGCGC	15	-	69420913-69420962	15q23b	Homo sapiens ribosomal protein L17-like (LOC645296), mRNA.					
Homo sapiens	RefSeq	NM_032932.3	ILMN_427	RAB11FIP4	NM_032932.3	NM_032932.3		84440	54111426	NM_032932.3	RAB11FIP4	NP_116321.2	ILMN_1681467	0006370195	S	8408	TGTCTGGAAACAGGCTTAGCTTTAGTGCTGGGGTGGGACCTGCCCTGTGG	17	+	26889135-26889184	17q11.2d	Homo sapiens RAB11 family interacting protein 4 (class II) (RAB11FIP4), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a recycling endosome [goid 55038] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ00131; KIAA1821; MGC126566; MGC11316; RAB11-FIP4	FLJ00131; KIAA1821; MGC126566; MGC11316; RAB11-FIP4
Homo sapiens	RefSeq	NM_024742.1	ILMN_5121	ARMC5	NM_024742.1	NM_024742.1		79798	28875783	NM_024742.1	ARMC5	NP_079018.1	ILMN_1697088	0002060154	S	4453	CCTGAGACTGGCAAGGGAGGAGGCTGAGCAGAAGGAGTCATCATGGAGGA	16	+	31385769-31385818	16p11.2c	Homo sapiens armadillo repeat containing 5 (ARMC5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ00019; FLJ13063	FLJ00019; FLJ13063
Homo sapiens	RefSeq	XM_498275.2	ILMN_31618	LOC442382	XM_498275.2	XM_498275.2		442382	89027931	XM_498275.2	LOC442382	XP_498275.2	ILMN_1677166	0005900563	S	169	ATTGTTAAAGCTGTCACATGCGGTAGAAATGTTTATGACAGCATCTTCAC	8	+	19142606-19142655	8p21.3c	PREDICTED: Homo sapiens similar to Plasma membrane calcium-transporting ATPase 1 (PMCA1) (Plasma membrane calcium pump isoform 1) (Plasma membrane calcium ATPase isoform 1) (LOC442382), mRNA.					
Homo sapiens	RefSeq	NM_020369.1	ILMN_163010	FSCN3	NM_020369.1	NM_020369.1		29999	9966790	NM_020369.1	FSCN3	NP_065102.1	ILMN_1689635	0002140424	S	1612	CTCACTGTACTGGCCCCCAATGGCTTCTACATGCGAGCCGACCAAAGTGG	7	+	127027585-127027634	7q32.1a	Homo sapiens fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus) (FSCN3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10783262] [evidence TAS]		Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IEA]		
Homo sapiens	RefSeq	NM_020794.1	ILMN_6839	LRRC7	NM_020794.2	NM_020794.2		57554	112734864	NM_020794.2	LRRC7	NP_065845.1	ILMN_1810593	0006370168	S	4947	CGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCATCAG	1	+	70328013-70328062	1p31.1k	Homo sapiens leucine rich repeat containing 7 (LRRC7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15767459] [evidence IPI]	MGC144918; KIAA1365; DKFZp686I1147	KIAA1365; DKFZp686I1147
Homo sapiens	RefSeq	XR_015892.1	ILMN_182678	LOC728908	XR_015892.1	XR_015892.1		728908	113427193	XR_015892.1	LOC728908		ILMN_3236935	0004230487	S	1480	TCACCCCACCTGGGCCCAGCCAGGAGCCCCGCCTGGCCATCAGTATTTAT	17	-	122416-122465		PREDICTED: Homo sapiens misc_RNA (LOC728908), miscRNA.					
Homo sapiens	RefSeq	XM_930229.1	ILMN_35602	LOC647193	XM_930229.1	XM_930229.1		647193	89040310	XM_930229.1	LOC647193	XP_935322.1	ILMN_1723642	0000430148	S	357	GCCCTTGCTGCAAACGTTCCAGAGCATCATTTGTGGTAAGGATACGCCCC	16	-	33040407-33040456		PREDICTED: Homo sapiens similar to hect domain and RLD 2 (LOC647193), mRNA.					
Homo sapiens	RefSeq	XM_931217.1	ILMN_45886	LOC283683	XM_931217.1	XM_931217.1		283683	89038002	XM_931217.1	LOC283683	XP_936310.1	ILMN_1659327	0003420577	I	1258	ATCTTCTGAGTTTTGGCATTTTGGAAAGCTTGATCTGACGCTCCTTTTCT	15	-	20660139-20660188	15q11.2c	PREDICTED: Homo sapiens hypothetical protein LOC283683, transcript variant 2 (LOC283683), mRNA.					
Homo sapiens	Unigene	Hs.347014	ILMN_86873	HS.347014	Hs.347014		Hs.347014		24994043	CA503089			ILMN_1846110	0006620333	S	591	AGCAATCAATGGCAAGAGGAAAAAAGGAGAGAAGACACGCTCAAGACAGC	2	+	55253779-55253828		UI-CF-FN0-afp-k-20-0-UI.s1 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-afp-k-20-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_931634.1	ILMN_38382	LOC649971	XM_943996.1	XM_943996.1		649971	88987026	XM_943996.1	LOC649971	XP_949089.1	ILMN_1659028	0003450767	S	261	CGGGCCCCGGGCATCCCCAGGTTTGGAATTAGGATTAGGCGTTGGAGTTA					PREDICTED: Homo sapiens hypothetical LOC649971 (LOC649971), mRNA.					
Homo sapiens	RefSeq	NM_006372.3	ILMN_28470	SYNCRIP	NM_006372.3	NM_006372.3		10492	23397426	NM_006372.3	SYNCRIP	NP_006363.3	ILMN_1727740	0004880500	S	2525	CCGCTTGGACACGAACAAAGCCACACTTCTAACTGCTTCTGGCGAACTGA	6	-	86381015-86381064	6q14.3c	Homo sapiens synaptotagmin binding, cytoplasmic RNA interacting protein (SYNCRIP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9847309] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9847309] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9847309] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12674497] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [evidence IEA]	dJ3J17.2; pp68; RP1-3J17.2; HNRPQ1; hnRNP-Q; NSAP1; GRY-RBP	dJ3J17.2; pp68; HNRPQ1; RP1-3J17.2; hnRNP-Q; NSAP1; GRY-RBP
Homo sapiens	Unigene	Hs.537432	ILMN_103291	HS.537432	Hs.537432		Hs.537432		18986906	BM677010			ILMN_1885051	0003440709	S	23	GTGCTGCTGTCCTGGAGTACAGACATGGTGGCTAGAAGCATGAAATCACC	8_random	-	70589952-70590001		UI-E-EO1-aib-b-13-0-UI.s1 UI-E-EO1 Homo sapiens cDNA clone UI-E-EO1-aib-b-13-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001001998.1	ILMN_26222	EXOSC10	NM_001001998.1	NM_001001998.1		5394	50301239	NM_001001998.1	EXOSC10	NP_001001998.1	ILMN_1711189	0007610468	I	2149	GACACCGTGCTCCCGTCTCTCAGGCAGCGAAGTTCGATCCATCAACCAAA	1	-	11133999-11134048	1p36.22b	Homo sapiens exosome component 10 (EXOSC10), transcript variant 1, mRNA.	Complex of 3'-5' exoribonucleases found in the nucleus [goid 176] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 1383382] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 1383382] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15231747] [evidence IPI]	PMSCL2; PM-Scl; PM/Scl-100; PMSCL; RRP6; p4; Rrp6p; p2; p3	PMSCL2; PM-Scl; PM/Scl-100; PMSCL; RRP6; p4; Rrp6p; p2; p3
Homo sapiens	RefSeq	NM_002685.2	ILMN_26222	EXOSC10	NM_001001998.1	NM_001001998.1		5394	50301239	NM_001001998.1	EXOSC10	NP_001001998.1	ILMN_1670796	0004890463	A	2673	GACAGAGGCTTCAGGTACAACTGGCCACAGAGATAGTCCTGGAAGACACG	1	-	11126760-11126774:11126775-11126805:11128065-11128068	1p36.22b	Homo sapiens exosome component 10 (EXOSC10), transcript variant 1, mRNA.	Complex of 3'-5' exoribonucleases found in the nucleus [goid 176] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 1383382] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 1383382] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15231747] [evidence IPI]	PMSCL2; PM-Scl; PM/Scl-100; PMSCL; RRP6; p4; Rrp6p; p2; p3	PMSCL2; PM-Scl; PM/Scl-100; PMSCL; RRP6; p4; Rrp6p; p2; p3
Homo sapiens	RefSeq	XM_001721886.1	ILMN_337559	LOC100129297	XM_001721886.1	XM_001721886.1		100129297	169165540	XM_001721886.1	LOC100129297	XP_001721938.1	ILMN_3255931	0001070671	M	248	GGCCCCATCTGGAACAGAAGGAGAAGAGACATTCTAGGGAGGAACACACC				3q13.2b	PREDICTED: Homo sapiens hypothetical protein LOC100129297 (LOC100129297), mRNA.					
Homo sapiens	RefSeq	XM_001716155.1	ILMN_348305	LOC729623	XM_001716155.1	XM_001716155.1		729623	169169945	XM_001716155.1	LOC729623	XP_001716207.1	ILMN_3246219	0005270711	S	1244	CACCCAGGGCAAGTTGATGTTGGGGGAAAGCAGAAGTCAAGCCAGCCGCG	7	-	99491-99540		PREDICTED: Homo sapiens similar to protein kinase, cAMP-dependent, regulatory, type I, beta (LOC729623), mRNA.					
Homo sapiens	RefSeq	XM_001719745.1	ILMN_342457	LOC100128975	XM_001719745.1	XM_001719745.1		100128975	169213602	XM_001719745.1	LOC100128975	XP_001719797.1	ILMN_3185144	0000650162	A	179	CTCTGGAGGAGTGGCATTGCCTGGACACTGTACAGCGGAAGTTGTATACG	19	-	19909552-19909601	19p12d	PREDICTED: Homo sapiens similar to zinc finger protein 626 (LOC100128975), mRNA.					
Homo sapiens	RefSeq	XM_001714089.1	ILMN_345114	LOC100128862	XM_001714089.1	XM_001714089.1		100128862	169210121	XM_001714089.1	LOC100128862	XP_001714141.1	ILMN_3188196	0006860598	A	1161	AGGCCTCCTCCAGTGGCGTCAGCTCTCTGGAAATGTGACAAGCTGCTGTC	16	+	88306600-88306649	16q24.3b	PREDICTED: Homo sapiens hypothetical protein LOC100128862 (LOC100128862), mRNA.					
Homo sapiens	RefSeq	XM_929154.1	ILMN_42908	LOC646198	XM_929154.1	XM_929154.1		646198	89059491	XM_929154.1	LOC646198	XP_934247.1	ILMN_1786213	0000360541	S	181	CCCGGCGCGGTGCCCCAGGTCGGCCGCGGAGCCGACCCGGGGCCCCTCGA	X	-	24078080-24078129		PREDICTED: Homo sapiens hypothetical protein LOC646198 (LOC646198), mRNA.					
Homo sapiens	RefSeq	NM_170743.2	ILMN_179262	IL28RA	NM_170743.2	NM_170743.2		163702	28416903	NM_170743.2	IL28RA	NP_734464.1	ILMN_2405324	0003520398	A	4323	CTGGGCCTGCGCTGGAAGCATATCCCGTGAAAAGTGTTAGTGCCTTAGGT	1	-	24480823-24480872	1p36.11d	Homo sapiens interleukin 28 receptor, alpha (interferon, lambda receptor) (IL28RA), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12483210] [evidence NAS]; A protein complex that binds interleukin-28 and interleukin-29. Composed of two subunits, IL-28R alpha and IL-10R beta [goid 32002] [pmid 12469119] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 12469119] [evidence NAS]; Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism [goid 50691] [pmid 12469119] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [pmid 12483210] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12469119] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12483210] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	LICR2; CRF2/12; IFNLR; IFNLR1	CRF2/12; IFNLR1; LICR2; IFNLR
Homo sapiens	RefSeq	NM_138275.1	ILMN_20734	C6ORF25	NM_138275.1	NM_138275.1		80739	19913380	NM_138275.1	C6orf25	NP_612119.1	ILMN_1791889	0002370239	A	397	GGGCCTACCCATGCTCCACTTGTGAAAACCGAGCCCCAGAGGCCAGTAAA	6	+	31691751-31691763:31692542-31692578	6p21.33a	Homo sapiens chromosome 6 open reading frame 25 (C6orf25), transcript variant 5, mRNA.				NG31; MGC142281; G6b; MGC142279	NG31; MGC142281; G6b; MGC142279
Homo sapiens	RefSeq	XM_927860.1	ILMN_46913	LOC644763	XM_927860.1	XM_927860.1		644763	89031313	XM_927860.1	LOC644763	XP_932953.1	ILMN_1667402	0002340189	S	344	CACTGCCGTCCCCCAAGGTCCAGAATGTCAGCTCGCCTCACAAGTCAGAA	10	+	58771252-58771301		PREDICTED: Homo sapiens similar to erythrocyte membrane protein band 4.1 like 4B isoform 2 (LOC644763), mRNA.					
Homo sapiens	RefSeq	NM_032205.2	ILMN_25591	PHF20L1	NM_032205.3	NM_032205.3		51105	109134329	NM_032205.3	PHF20L1	NP_115581.3	ILMN_1727287	0003460168	I	2115	GCTGCTTTTAGGTTAACCACAAAGGAACAACTCAGGATCAGTCGTGATTG	8	+	133837433-133837482	8q24.22b	Homo sapiens PHD finger protein 20-like 1 (PHF20L1), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CGI-72; MGC64923	CGI-72; MGC64923
Homo sapiens	RefSeq	NM_021820.1	ILMN_8801	TRMT11	NM_001031712.2	NM_001031712.2		60487	94420682	NM_001031712.2	TRMT11	NP_001026882.2	ILMN_1717854	0002680521	I	1562	GACATCTGGATGTGAACTTTCATGTATGATCCAGAAAATAGGTACGGTTT	6	+	126349449-126349461:126356596-126356632	6q22.32a	Homo sapiens tRNA methyltransferase 11 homolog (S. cerevisiae) (TRMT11), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ187J11.2; TRM11; C6orf75; dJ187J11; MDS024	dJ187J11.2; MDS024
Homo sapiens	RefSeq	NM_001031712.1	ILMN_8801	TRMT11	NM_001031712.2	NM_001031712.2		60487	94420682	NM_001031712.2	TRMT11	NP_001026882.2	ILMN_1805481	0006650176	A	1301	CTCGTTAGCAACTGCGAGCAGAAGCTTTCCAGTCACACATCAAGGCGCTT	6	+	126342346-126342395	6q22.32a	Homo sapiens tRNA methyltransferase 11 homolog (S. cerevisiae) (TRMT11), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ187J11.2; TRM11; C6orf75; dJ187J11; MDS024	dJ187J11.2; MDS024
Homo sapiens	RefSeq	NM_001031712.1	ILMN_8801	TRMT11	NM_001031712.2	NM_001031712.2		60487	94420682	NM_001031712.2	TRMT11	NP_001026882.2	ILMN_1761148	0004070278	I	4	CTGCCTCGCAGAGCTTCCGCTTCCGGCCCTTCAGGCTCTGTCTCTGTGGA	6	+	126307579-126307628	6q22.32a	Homo sapiens tRNA methyltransferase 11 homolog (S. cerevisiae) (TRMT11), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ187J11.2; TRM11; C6orf75; dJ187J11; MDS024	dJ187J11.2; MDS024
Homo sapiens	Unigene	Hs.571130	ILMN_123311	HS.571130	Hs.571130		Hs.571130		15449232	BI561918			ILMN_1856564	0006330392	S	271	TGGGAGGCGGGGTGCGGTTCTCGTCCAAGTTCTACCCCATTTGCTTTGTG	6	-	15356169-15356218		603254821F1 NIH_MGC_97 Homo sapiens cDNA clone IMAGE:5297356 5, mRNA sequence					
Homo sapiens	RefSeq	NM_015938.2	ILMN_25169	NMD3	NM_015938.3	NM_015938.3		51068	142359942	NM_015938.3	NMD3	NP_057022.2	ILMN_1727348	0005360204	S	2111	GGTAGGGAAATTAGGGTTCAGTTTATCACTGGACATTCAGGAGGCAAGTC	3	+	160969178-160969227	3q26.1a	Homo sapiens NMD3 homolog (S. cerevisiae) (NMD3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		CGI-07; FLJ21053	CGI-07; FLJ21053
Homo sapiens	RefSeq	NM_024894.1	ILMN_13899	NOL10	NM_024894.1	NM_024894.1		79954	13430871	NM_024894.1	NOL10	NP_079170.1	ILMN_1775011	0006760653	S	2919	CCATGTTTCAGTCACCTCCCTCCAGGCCCCTCCTCCAACACCGAAGATTA	2	-	10628707-10628756	2p25.1c	Homo sapiens nucleolar protein 10 (NOL10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FLJ14075; FLJ13938	FLJ14075; FLJ13938
Homo sapiens	RefSeq	XM_001718144.1	ILMN_343805	LOC100131277	XM_001718144.1	XM_001718144.1		100131277	169172461	XM_001718144.1	LOC100131277	XP_001718196.1	ILMN_3209477	0004250424	A	1166	GAGGACATAAGTGGATCGCCTCTGCTGTTGCATGTTGGCTTGGAGAACAG				8p11.23c	PREDICTED: Homo sapiens hypothetical protein LOC100131277 (LOC100131277), mRNA.					
Homo sapiens	RefSeq	XM_941213.1	ILMN_45499	LOC651936	XM_941213.1	XM_941213.1		651936	89034616	XM_941213.1	LOC651936	XP_946306.1	ILMN_1736923	0004670377	S	295	TGGGGTTATATAAAGAGACCAAACATACAACTCATTGGCATCCCTGAGAG					PREDICTED: Homo sapiens hypothetical protein LOC651936 (LOC651936), mRNA.					
Homo sapiens	RefSeq	XM_496056.2	ILMN_37424	LOC642397	XM_496056.2	XM_496056.2		642397	89038126	XM_496056.2	LOC642397	XP_496056.2	ILMN_1785455	0000990750	I	1714	ATGCATAATAGTCTCTTTTTCATTTAATACATACTAATTGTCTATTTCAG	15	+	28561151-28561200	15q13.2b	PREDICTED: Homo sapiens similar to junction-mediating and regulatory protein, transcript variant 1 (LOC642397), mRNA.					
Homo sapiens	RefSeq	XM_937666.1	ILMN_35318	LOC648600	XM_937666.1	XM_937666.1		648600	88957926	XM_937666.1	LOC648600	XP_942759.1	ILMN_1677091	0001300458	S	207	AATACCAATTGTAATTGGGGGTTTCGGTAACTGGTTCAGGTTCCTTACCT					PREDICTED: Homo sapiens similar to Cytochrome c oxidase subunit 1 (Cytochrome c oxidase polypeptide I) (LOC648600), mRNA.					
Homo sapiens	RefSeq	XM_940342.1	ILMN_41491	LOC651208	XM_940342.1	XM_940342.1		651208	88947797	XM_940342.1	LOC651208	XP_945435.1	ILMN_1699070	0002450039	S	24	GCCAGGCTGTAACCCCAGTGACCCCAGAGACCAGACAAAGTTAAACCATT					PREDICTED: Homo sapiens hypothetical protein LOC651208 (LOC651208), mRNA.					
Homo sapiens	RefSeq	NM_001005742.1	ILMN_28933	GBA	NM_001005742.1	NM_001005742.1		2629	54607046	NM_001005742.1	GBA	NP_001005742.1	ILMN_2364110	0004780133	A	1718	GGCTCTGCTGTTGTGGTCGTGCTAAACCGCTCCTCTAAGGATGTGCCTCT	1	-	155204870-155204891:155204986-155205013	1q22a	Homo sapiens glucosidase, beta; acid (includes glucosylceramidase) (GBA), transcript variant 3, mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine [goid 4348] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022370] [evidence IPI]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GCB; GBA1; GLUC	GCB; GBA1; GLUC
Homo sapiens	RefSeq	NM_001005741.1	ILMN_28933	GBA	NM_001005742.1	NM_001005742.1		2629	54607046	NM_001005742.1	GBA	NP_001005742.1	ILMN_1755123	0000580048	A	1603	CATGTTCTACCACCTTGGCCACTTCAGCAAGTTCATTCCTGAGGGCTCCC	1	-	155205079-155205102:155205472-155205497	1q22a	Homo sapiens glucosidase, beta; acid (includes glucosylceramidase) (GBA), transcript variant 3, mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine [goid 4348] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022370] [evidence IPI]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GCB; GBA1; GLUC	GCB; GBA1; GLUC
Homo sapiens	RefSeq	NM_031966.2	ILMN_177161	CCNB1	NM_031966.2	NM_031966.2		891	34304372	NM_031966.2	CCNB1	NP_114172.1	ILMN_1712803	0004590040	S	1811	ACTTCCATAGGACATACTGCATGTAAGCCAAGTCATGGAGAATCTGCTGC	5	+	68473790-68473839	5q13.2a	Homo sapiens cyclin B1 (CCNB1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16109376] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7799941] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1828290] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11598127] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10395539] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12791267] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1384126] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1717476] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10395539] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]	Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9001210] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10373560] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8756624] [evidence IPI]	CCNB	CCNB
Homo sapiens	RefSeq	NM_016283.4	ILMN_483	TAF9	NM_016283.4	NM_016283.4		6880	62865615	NM_016283.4	TAF9	NP_057367.1	ILMN_2343332	0000990474	A	127	CAGGGGTTGGAAAAACCACACTAGGCAAAGAACTTGCGTCAAAATCAGGA	5	-	68698122-68698171	5q13.2a	Homo sapiens TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa (TAF9), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [pmid 14580349] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10821850] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 7597030] [evidence TAS]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 10821850] [evidence TAS]	TAFIID32; MGC3647; MGC:1603; AD-004; MGC:3647; TAF2G; MGC1603; CGI-137; MGC5067; CIP; MGC:5067; AK6; CINAP; TAFII32; TAFII31	TAFIID32; MGC3647; MGC:1603; AD-004; MGC:3647; TAF2G; MGC1603; CGI-137; MGC5067; CIP; MGC:5067; AK6; CINAP; TAFII32; TAFII31
Homo sapiens	RefSeq	XR_037407.1	ILMN_345786	LOC100134228	XR_037407.1	XR_037407.1		100134228	169171506	XR_037407.1	LOC100134228		ILMN_3244309	0001570152	S	231	TTGTTGCAAGCACCGTCCACTCAGGAGGCGCCCCGCAACCGGTGTGACGA					PREDICTED: Homo sapiens misc_RNA (LOC100134228), miscRNA.					
Homo sapiens	RefSeq	XM_944644.1	ILMN_39061	LOC651398	XM_944644.1	XM_944644.1		651398	89039137	XM_944644.1	LOC651398	XP_949737.1	ILMN_1722772	0001980240	S	52	TTTCCTGCCCCCCACCTCCAGAAAACAATAAACTTCAAAGGGAATGGTGG					PREDICTED: Homo sapiens hypothetical LOC651398 (LOC651398), mRNA.					
Homo sapiens	RefSeq	NM_203370.1	ILMN_28059	C3ORF54	NM_203370.1	NM_203370.1		389119	42766423	NM_203370.1	C3orf54	NP_976248.1	ILMN_1690454	0004200367	S	884	TCATGCCCACCTCGCCCAGAACCTGAACTGCCTGCGGATGTCTCACGCTT	3	+	49817311-49817360	3p21.31c	Homo sapiens chromosome 3 open reading frame 54 (C3orf54), mRNA.				MGC20416	MGC20416
Homo sapiens	RefSeq	XM_001726057.1	ILMN_344744	LOC100128813	XM_001726057.1	XM_001726057.1		100128813	169214045	XM_001726057.1	LOC100128813	XP_001726109.2	ILMN_3187763	0000770279	A	92	ACCCCGCCACGCCTCCTCTTAACCTACATGATCAGGGCCAGGCAGAGGAA				19q13.33d	PREDICTED: Homo sapiens hypothetical LOC100128813 (LOC100128813), mRNA.					
Homo sapiens	RefSeq	XM_001716439.1	ILMN_342873	LOC100133930	XM_001716439.1	XM_001716439.1		100133930	169163678	XM_001716439.1	LOC100133930	XP_001716491.1	ILMN_3241957	0005260500	S	2404	ACGGGCAGGACCACGTGGGCCGTGATCGTGGGTTGCCGAGAGGACCTGAG					PREDICTED: Homo sapiens similar to D-2-hydroxyglutarate dehydrogenase, mitochondrial (LOC100133930), mRNA.					
Homo sapiens	RefSeq	NM_201274.2	ILMN_1540	MPRIP	NM_015134.2	NM_015134.2		23164	50980306	NM_015134.2	MPRIP	NP_055949.2	ILMN_1774547	0004880563	A	3546	GCCCAGCCAGCACGCCTCAAGGTAGATGGAATCCCCACTGGTCAGAGAAA	17	+	17028983-17029032	17p11.2h	Homo sapiens myosin phosphatase Rho interacting protein (MPRIP), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	p116Rip; RHOIP3; KIAA0864	p116Rip; RHOIP3; KIAA0864
Homo sapiens	RefSeq	NM_001469.3	ILMN_13892	XRCC6	NM_001469.3	NM_001469.3		2547	51093847	NM_001469.3	XRCC6	NP_001460.1	ILMN_1743097	0000430100	S	1593	TGCCCAAGGTTGAAGCAATGAATAAAAGACTGGGCTCCTTGGTGGATGAG	22	+	40387281-40387330	22q13.2a	Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 6 (XRCC6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2917966] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10508516] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12065431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12023295] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 12145306] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]	The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase [goid 6266] [pmid 9826654] [evidence TAS]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [pmid 10508516] [evidence TAS]; The molecular events that lead to the integration of a viral genome into the host genome [goid 19047] [pmid 16291214] [evidence EXP]; The set of processes involved in the start of virus infection of cells [goid 19059] [pmid 12091904] [evidence EXP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 12145306] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1537839] [evidence NAS]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 7957065] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [pmid 7957065] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10783163] [evidence IPI]	TLAA; G22P1; CTCBF; ML8; CTC75; KU70	TLAA; G22P1; CTCBF; ML8; CTC75; KU70
Homo sapiens	RefSeq	NM_001469.3	ILMN_13892	XRCC6	NM_001469.3	NM_001469.3		2547	51093847	NM_001469.3	XRCC6	NP_001460.1	ILMN_2166506	0006380347	S	1869	TGGAAGCCCTCACCAAGCACTTCCAGGACTGACCAGAGGCCGCGCGTCCA	22	+	40389734-40389765:40389766-40389783	22q13.2a	Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 6 (XRCC6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2917966] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10508516] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12065431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12023295] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 12145306] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [evidence IEA]	The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase [goid 6266] [pmid 9826654] [evidence TAS]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [pmid 10508516] [evidence TAS]; The molecular events that lead to the integration of a viral genome into the host genome [goid 19047] [pmid 16291214] [evidence EXP]; The set of processes involved in the start of virus infection of cells [goid 19059] [pmid 12091904] [evidence EXP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 12145306] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1537839] [evidence NAS]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 7957065] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [pmid 7957065] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10783163] [evidence IPI]	TLAA; G22P1; CTCBF; ML8; CTC75; KU70	TLAA; G22P1; CTCBF; ML8; CTC75; KU70
Homo sapiens	RefSeq	NM_006665.2	ILMN_27069	HPSE	NM_006665.2	NM_006665.2		10855	19923365	NM_006665.2	HPSE	NP_006656.1	ILMN_1779547	0000520162	S	3178	CACACTTTTTGCTTACAGGGGTGAATTGTGTAGTGGTGAAGACTCGGCTT	4	-	84433116-84433165	4q21.23a	Homo sapiens heparanase (HPSE), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [pmid 10446189] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate [goid 4566] [pmid 10395325] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HPA; HSE1; HPSE1; HPR1	HPA; HSE1; HPSE1; HPR1
Homo sapiens	RefSeq	XM_933386.1	ILMN_34322	LOC644311	XM_933386.1	XM_933386.1		644311	89029446	XM_933386.1	LOC644311	XP_938479.1	ILMN_1652259	0004070343	I	2	AGAGGAAAGGCCTGTCCTCCAAGCCAATGTGCAGCCTGACTCTGGGGCCA	9	+	66979378-66979427		PREDICTED: Homo sapiens similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like, transcript variant 2 (LOC644311), mRNA.					
Homo sapiens	RefSeq	NM_138568.2	ILMN_165381	EXOC3L2	NM_138568.2	NM_138568.2		90332	29788775	NM_138568.2	EXOC3L2	NP_612635.2	ILMN_1670038	0001240561	S	1349	CTCCCTGCCTGGGACCACACACCCCTGGGATAGAAAGACCCTTAGATGTC	19	-	50408039-50408088	19q13.32a	Homo sapiens exocyst complex component 3-like 2 (EXOC3L2), mRNA.				XTP7; FLJ36147; MGC16332	XTP7; FLJ36147; MGC16332
Homo sapiens	RefSeq	NR_031600.1	ILMN_388526	MIR1234	NR_031600.1	NR_031600.1		100302196	269847060	NR_031600.1	MIR1234		ILMN_3308876	0004590575	S	34	GCCGGGGACGGCTTGGGCCTGCCTAGTCGGCCTGACCACCCACCCCACAG					Homo sapiens microRNA 1234 (MIR1234), microRNA.					
Homo sapiens	RefSeq	NM_018223.1	ILMN_26892	CHFR	NM_018223.1	NM_018223.1		55743	8922674	NM_018223.1	CHFR	NP_060693.1	ILMN_1653828	0000830168	S	2866	TGAGGGGCACCTTGGCTTCCGCCTGTGCTAGCTTTGCCATGTCATCTGGA	12	-	131927233-131927282	12q24.33d	Homo sapiens checkpoint with forkhead and ring finger domains (CHFR), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10935642] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 10935642] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18504434] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF116; RNF196; FLJ10796; FLJ33629	RNF116; RNF196; FLJ10796; FLJ33629
Homo sapiens	RefSeq	NR_003065.1	ILMN_166184	SNORD84	NR_003065.1	NR_003065.1		692199	95147683	NR_003065.1	SNORD84		ILMN_3245672	0004540544	S	29	GAGCGCTTTGCGCAGTGATGACCCTCATCTATCACCCTTGACTGATGGCT	6	-	31508955-31508955:31616857-31616905	6p21.33a	Homo sapiens small nucleolar RNA, C/D box 84 (SNORD84), small nucleolar RNA.				U84	U84
Homo sapiens	RefSeq	NM_015167.2	ILMN_3170	JMJD6	NM_015167.2	NM_015167.2		23210	125988388	NM_015167.2	JMJD6	NP_055982.2	ILMN_2412024	0004220743	A	1476	AAACGGGGACACCACCTCCCAGGACGACTGTGTCAGCAAAGAGCGCAGCT	17	-	74714821-74714870	17q25.2a	Homo sapiens jumonji domain containing 6 (JMJD6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14729065] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IEA]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IEA]; The process by which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis [goid 43654] [evidence IEA]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of the removal of a methyl group from arginine at position 2 of the histone H3 protein [goid 33746] [pmid 17947579] [evidence IDA]; Catalysis of the removal of a methyl group from arginine at position 3 of the histone H4 protein [goid 33749] [pmid 17947579] [evidence IDA]	PTDSR; PTDSR1; PSR; KIAA0585	PTDSR1; PSR; KIAA0585
Homo sapiens	RefSeq	NM_001006938.1	ILMN_5218	TCEAL6	NM_001006938.1	NM_001006938.1		158931	55741633	NM_001006938.1	TCEAL6	NP_001006939.1	ILMN_1729165	0002340066	S	749	GCCTTTGGCCTTCCATTCTGACTTCTCTGATGAGATTATTGTCAACCCTG	X	-	101282305-101282354	Xq22.1d	Homo sapiens transcription elongation factor A (SII)-like 6 (TCEAL6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		Tceal3	Tceal3
Homo sapiens	RefSeq	XM_943421.1	ILMN_165124	LOC643888	XR_016661.1	XR_016661.1		643888	113430019	XR_016661.1	LOC643888		ILMN_1665060	0001010543	I	1493	AGTTTTTATAAGCTCTTCGTGAGTTTGTGCCAGTGACCAGGTAGCTCCTT	X	+	111512585-111512634	Xq23a	PREDICTED: Homo sapiens hypothetical LOC643888 (LOC643888), mRNA.					
Homo sapiens	RefSeq	NM_030671.1	ILMN_7758	PTPRO	NM_030671.1	NM_030671.1		5800	13677221	NM_030671.1	PTPRO	NP_109596.1	ILMN_2316878	0003940541	A	3456	GTTGGTGTTTCTTCCTTGGCCCTTTTGGACTAATGTTACTGTCCAAGTTC	12	+	15640994-15641043	12p12.3e	Homo sapiens protein tyrosine phosphatase, receptor type, O (PTPRO), transcript variant 5, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10498613] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7665166] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 10498613] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 7753550] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 10498613] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5001] [pmid 7665166] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	GLEPP1; PTP-U2; PTPU2	GLEPP1; PTP-U2; PTPU2
Homo sapiens	RefSeq	NM_018448.2	ILMN_22065	CAND1	NM_018448.2	NM_018448.2		55832	21361793	NM_018448.2	CAND1	NP_060918.2	ILMN_1744647	0000240162	S	5158	TGGGTAAGTGTTCACTACTTTTCCTGATTAAGGGATCTGTGCTGGGGAAC	12	+	65993993-65994042	12q14.3c	Homo sapiens cullin-associated and neddylation-dissociated 1 (CAND1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 12609982] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10581176] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 12609982] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 10581176] [evidence IDA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [pmid 12609982] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12504025] [evidence IPI]	FLJ90441; FLJ10114; TIP120; KIAA0829; FLJ38691; FLJ10929; TIP120A; DKFZp434M1414	FLJ90441; FLJ10114; TIP120; KIAA0829; FLJ38691; FLJ10929; TIP120A; DKFZp434M1414
Homo sapiens	RefSeq	NM_005014.1	ILMN_11996	OMD	NM_005014.1	NM_005014.1		4958	4826875	NM_005014.1	OMD	NP_005005.1	ILMN_1749846	0004610246	S	1870	GATCTCACCATTATGACATCCATCCCCCTAGCTCACCACATAGCACATAG	9	-	94216694-94216743	9q22.31a	Homo sapiens osteomodulin (OMD), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OSAD; SLRR2C	OSAD; SLRR2C
Homo sapiens	RefSeq	NM_199046.1	ILMN_21753	TEPP	NM_199046.1	NM_199046.1		374739	40804769	NM_199046.1	TEPP	NP_950247.1	ILMN_2289473	0004810291	I	726	AGGAAGCCCTGTGTGGGGCGTGGGCAGGGCGTCCGTGCTCCCCCGACTCA	16	+	56576807-56576856	16q13d	Homo sapiens testis/prostate/placenta-expressed protein (TEPP), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC129931; MGC129930	MGC129931; MGC129930
Homo sapiens	RefSeq	NM_199046.1	ILMN_21753	TEPP	NM_199046.1	NM_199046.1		374739	40804769	NM_199046.1	TEPP	NP_950247.1	ILMN_2398294	0007610731	A	193	TGCTATTGCTATGGCCCGCATCATTGACCTGGTGCCCTGGGACGATGGCT	16	+	56568032-56568039:56569220-56569261	16q13d	Homo sapiens testis/prostate/placenta-expressed protein (TEPP), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC129931; MGC129930	MGC129931; MGC129930
Homo sapiens	RefSeq	XM_939275.1	ILMN_34882	SH2D5	XM_939275.2	XM_939275.2		400745	113411984	XM_939275.2	SH2D5	XP_944368.2	ILMN_1695263	0004640274	I	6	GCCCACAAGAGTTGGTAAGAGGAAACGAGATTTCCCGGAAATAAAGCAGC				1p36.12b	PREDICTED: Homo sapiens SH2 domain containing 5 (SH2D5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_006439.3	ILMN_162698	MAB21L2	NM_006439.3	NM_006439.3		10586	18765720	NM_006439.3	MAB21L2	NP_006430.1	ILMN_1789162	0002600242	I	1759	TCGTGCCTGGGCGACCGGCTCAACGGCATCCTGCTGCAGCTCATCTCCTG	4	+	151724511-151724560	4q31.3a	Homo sapiens mab-21-like 2 (C. elegans) (MAB21L2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10556287] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process by which the anatomical structures of the embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 10172] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]		FLJ31103	FLJ31103
Homo sapiens	RefSeq	XM_944408.1	ILMN_39353	LOC654147	XM_944408.1	XM_944408.1		654147	88958103	XM_944408.1	LOC654147	XP_949501.1	ILMN_1704332	0003830053	S	194	GATGGCAACTCGGGGTTTCCACGGCGGGTGATCTCGGGACACCACGGGTT					PREDICTED: Homo sapiens similar to oxysterol binding protein-like 6 (LOC654147), mRNA.					
Homo sapiens	RefSeq	XM_937693.1	ILMN_137368	C8ORF30A	XM_937693.1	XM_937693.1		51236	89028971	XM_937693.1	C8orf30A	XP_942786.1	ILMN_1663364	0001820112	A	539	GCATGGAAAACCTGCTGGAGGTGCAGGCTTTCTCAGACCAGGCCTTCCTG				8q24.3g	PREDICTED: Homo sapiens chromosome 8 open reading frame 30A (C8orf30A), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_005012.1	ILMN_3567	ROR1	NM_005012.2	NM_005012.2		4919	134152724	NM_005012.2	ROR1	NP_005003.2	ILMN_1655904	0003890132	S	2989	AGCACTGGCCATGTGACTAGCTTGCCCTCATCAGGATCCAATCAGGAAGC	1	+	64416412-64416461	1p31.3c	Homo sapiens receptor tyrosine kinase-like orphan receptor 1 (ROR1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8875995] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8875995] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1334494] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1334494] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 1334494] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 8875995] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ537F10.1; NTRKR1; MGC99659	dJ537F10.1; NTRKR1; MGC99659
Homo sapiens	RefSeq	XM_933368.1	ILMN_3567	ROR1	NM_005012.2	NM_005012.2		4919	134152724	NM_005012.2	ROR1	NP_005003.2	ILMN_1665795	0004060626	S	98	AACAGCGCACCCTGCGCCCAGGGGCTGCCGTCCCGGGGCTCCCTCGGCGG	1	+	64012375-64012424	1p31.3c	Homo sapiens receptor tyrosine kinase-like orphan receptor 1 (ROR1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8875995] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8875995] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1334494] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1334494] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 1334494] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 8875995] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ537F10.1; NTRKR1; MGC99659	
Homo sapiens	RefSeq	XM_931247.1	ILMN_307048	WHAMML1	NR_003521.1	NR_003521.1		339005	145699125	NR_003521.1	WHAMML1		ILMN_1693986	0006020438	A	828	ACGGGCTGGAGAAGCTGTCGTCTCTATTCAAGATATCACAGTGAATTATT	15	-	23201515-23201564	15q11.2c	Homo sapiens WAS protein homolog associated with actin, golgi membranes and microtubules-like 1 (WHAMML1), non-coding RNA.					
Homo sapiens	RefSeq	XM_496050.2	ILMN_307048	WHAMML1	NR_003521.1	NR_003521.1		339005	145699125	NR_003521.1	WHAMML1		ILMN_1661897	0006590154	I	2573	GAGGCTTCATTCTTGGTTCTCTAGCTAAAAACAGTAGAAATTTTGCACAC	15	-	23188694-23188743	15q11.2c	Homo sapiens WAS protein homolog associated with actin, golgi membranes and microtubules-like 1 (WHAMML1), non-coding RNA.					
Homo sapiens	RefSeq	XM_370838.4	ILMN_307048	WHAMML1	NR_003521.1	NR_003521.1		339005	145699125	NR_003521.1	WHAMML1		ILMN_1758390	0002260048	I	3101	GCAGAAGGTGAATGAGGAGCAAAGTCACATCTTTGTGGCAGGCAAGAGAG	15	-	23188166-23188215	15q11.2c	Homo sapiens WAS protein homolog associated with actin, golgi membranes and microtubules-like 1 (WHAMML1), non-coding RNA.					
Homo sapiens	RefSeq	NR_026983.1	ILMN_386956	BTF3L1	NR_026983.1	NR_026983.1		690	224177471	NR_026983.1	BTF3L1		ILMN_3309354	0002600368	S	256	TCAAAGAGACTGGCTAACACTGCCCAAACAATCTGTGGGTGGAAAAGCAC	13	+	77502840-77502889	13q22.3a	Homo sapiens basic transcription factor 3, like 1 pseudogene (BTF3L1), non-coding RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1386332] [evidence TAS]		
Homo sapiens	RefSeq	NM_005858.2	ILMN_175996	AKAP8	NM_005858.2	NM_005858.2		10270	21493046	NM_005858.2	AKAP8	NP_005849.1	ILMN_1741572	0006550053	S	3270	AATGGCCCTGCTGTGTCAGTTTCCCTGTGGCCTTTTGAACTGTACATCTC	19	-	15464546-15464595	19p13.12b-p13.12a	Homo sapiens A kinase (PRKA) anchor protein 8 (AKAP8), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; The pronucleus originating from the ovum that is being fertilized [goid 1939] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9473338] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 9473338] [evidence TAS]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9473338] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AKAP95; DKFZp586B1222	AKAP95; DKFZp586B1222
Homo sapiens	RefSeq	NM_004106.1	ILMN_26951	FCER1G	NM_004106.1	NM_004106.1		2207	4758343	NM_004106.1	FCER1G	NP_004097.1	ILMN_2123743	0003850440	S	214	TGTTTACACGGGCCTGAGCACCAGGAACCAGGAGACTTACGAGACTCTGA	1	+	159455128-159455137:159455295-159455334	1q23.3a	Homo sapiens Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide (FCER1G), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9280292] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9295288] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9028946] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1535625] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1535625] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; A protein complex composed of an Fc-epsilon RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-episilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgE [goid 32998] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of type IIa hypersensitivity, a type of inflammatory response [goid 1798] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of type III hypersensitivity, a type of inflammatory response [goid 1805] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of type I hypersensitivity, a type of inflammatory response [goid 1812] [evidence IEA]; A series of molecular signals generated as a consequence of a the binding of the Fc portion of an immunoglobulin by an Fc receptor capable of activating or perpetuating an immune response. The Fc portion of an immunoglobulin is its C-terminal constant region [goid 2431] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IEA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-10 production [goid 32733] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of mast cell cytokine production [goid 32765] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a mast cell apoptosis [goid 33026] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 42590] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of mast cell degranulation [goid 43306] [evidence IEA]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9280292] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11788586] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9280292] [evidence IPI]; Combining with an immunoglobulin of the IgE isotype via the Fc region to initiate a change in cell activity [goid 19767] [evidence IEA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]		
Homo sapiens	RefSeq	NM_144666.1	ILMN_27983	DNHD1	NM_144666.1	NM_144666.1		144132	21389554	NM_144666.1	DNHD1	NP_653267.1	ILMN_1810267	0003290392	S	3163	AGTGACCTGCCAGCCCCAGCCGACCTGACTGTGTACTCGTGTCCTGTGTA	11	+	6549610-6549659	11p15.4c	Homo sapiens dynein heavy chain domain 1 (DNHD1), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	FLJ46184; DHCD1; FLJ32752	FLJ46184; DHCD1; FLJ32752
Homo sapiens	RefSeq	NM_173167.2	ILMN_183125	UNC45B	NM_173167.2	NM_173167.2		146862	75750482	NM_173167.2	UNC45B	NP_775259.1	ILMN_2320672	0005550079	A	5342	GTTTGCCCAAAAACAGCAAGGAACAGCCAATACCTGCCAACTTTCTAGGT	17	+	30540140-30540189	17q12a	Homo sapiens unc-45 homolog B (C. elegans) (UNC45B), transcript variant 1, mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	UNC45; FLJ38610; MGC119541; MGC119540; CMYA4	UNC45; FLJ38610; MGC119541; MGC119540; CMYA4
Homo sapiens	RefSeq	XM_001714020.1	ILMN_344150	LOC391205	XM_001714020.1	XM_001714020.1		391205	169161517	XM_001714020.1	LOC391205	XP_001714072.1	ILMN_3286353	0001450601	M	792	CTTTGCCCAGGCCCTGAAGCTGGCGCCCTCCTTGGCCCAGAACAGCCTGT				1p36.32c	PREDICTED: Homo sapiens hypothetical LOC391205 (LOC391205), mRNA.					
Homo sapiens	RefSeq	NM_144590.1	ILMN_7804	ANKRD22	NM_144590.2	NM_144590.2		118932	154091031	NM_144590.2	ANKRD22	NP_653191.2	ILMN_1799848	0000130181	S	822	CCTCTGCTCTTGGAAGCCCGTGCAGACCCCACAATAAAGAATAAGCATGG	10	-	90591690-90591739	10q23.31b	Homo sapiens ankyrin repeat domain 22 (ANKRD22), mRNA.				MGC22805	MGC22805
Homo sapiens	RefSeq	NM_001004302.1	ILMN_12911	LOC155060	NM_001004302.1	NM_001004302.1		155060	51972177	NM_001004302.1	LOC155060	NP_001004302.1	ILMN_1688435	0007200360	S	2515	AGCGCTCCTTCCAGTGCGCCCAGTACAGCAGGAGATTCATGCAGAAGCCC	7	+	148623097-148623146	7q36.1b	Homo sapiens hypothetical protein LOC155060 (LOC155060), mRNA.				FLJ16713	FLJ16713
Homo sapiens	RefSeq	NM_018392.3	ILMN_23437	C4ORF21	NM_018392.3	NM_018392.3		55345	38016155	NM_018392.3	C4orf21	NP_060862.2	ILMN_1754017	0006400367	S	2949	GGATCAGCTACTAGTGGTGTAATGGTCAGAGGACACAGCTCACAGCTAGG	4	-	113744222-113744271	4q25f	Homo sapiens chromosome 4 open reading frame 21 (C4orf21), mRNA.				FLJ11331	FLJ11331
Homo sapiens	RefSeq	NM_001013678.1	ILMN_22704	LOC400968	NM_001013678.1	NM_001013678.1		400968	61966802	NM_001013678.1	LOC400968	NP_001013700.1	ILMN_1702309	0005810338	S	4253	AATCACATGGAAGTTAAACACTACCCTCCTGAATAAATGACTAGCGGGTC	2	+	19622574-19622623	15q11.2b	Homo sapiens hypothetical LOC400968 (LOC400968), mRNA.					
Homo sapiens	RefSeq	NM_002444.2	ILMN_10863	MSN	NM_002444.2	NM_002444.2		4478	53729335	NM_002444.2	MSN	NP_002435.1	ILMN_1659895	0000730332	S	3678	CACCACCCCCCACTCTGTGCCTGACCTTGAGGAGTCTTGTGTGCATTGCT	X	+	64878226-64878275	Xq11.1c	Homo sapiens moesin (MSN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; A membrane projection with related cytoskeletal components at the trailing edge of a cell in the process of migrating or being activated, found on the opposite side of the cell from the leading edge or immunological synapse, respectively [goid 1931] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 16130169] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1924289] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8188263] [evidence TAS]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [pmid 12082081] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [pmid 12082081] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 16130169] [evidence TAS]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 12082081] [evidence IEP]; The initial attachment of a membrane to a target membrane, mediated by proteins protruding from the two membranes. Docking requires only that the membranes come close enough for the proteins to interact and adhere [goid 22614] [pmid 12082081] [evidence IEP]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [pmid 12082081] [evidence IEP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 15819698] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 1924289] [evidence TAS]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Interacting selectively with a cell adhesion molecule [goid 50839] [pmid 12082081] [evidence IPI]		
Homo sapiens	RefSeq	NM_153013.2	ILMN_1124	C5ORF33	NM_153013.3	NM_153013.3		133686	146134465	NM_153013.3	C5orf33	NP_694558.1	ILMN_1698770	0002760349	S	2390	GAGTCTTGTGGGCTCAGAAGTAAATTCTGTGAAAGCTGGACGGATAGTCG	5	-	36229714-36229763	5p13.2c	Homo sapiens chromosome 5 open reading frame 33 (C5orf33), transcript variant 2, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + NAD+ = ADP + NADP+ [goid 3951] [evidence IEA]	MGC43298; FLJ30596	MGC43298; FLJ30596
Homo sapiens	RefSeq	NM_139354.2	ILMN_11424	MATK	NM_139354.2	NM_139354.2		4145	111159471	NM_139354.2	MATK	NP_647611.1	ILMN_2319000	0005670605	A	1853	CCCGTGGACACCCCAGACCTGCGAAGGATGATCGCCCGATAAAGACGGAT	19	-	3777979-3778028	19p13.3e	Homo sapiens megakaryocyte-associated tyrosine kinase (MATK), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7530249] [evidence TAS]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [pmid 8288563] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8999872] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8999872] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp434N1212; HHYLTK; CHK; MGC1708; HYLTK; Lsk; MGC2101; CTK; HYL	DKFZp434N1212; HHYLTK; CHK; MGC1708; HYLTK; Lsk; MGC2101; CTK; HYL
Homo sapiens	RefSeq	NM_134426.2	ILMN_5076	SLC26A6	NM_134426.2	NM_134426.2		65010	94721256	NM_134426.2	SLC26A6	NP_602298.2	ILMN_2391900	0004230615	A	1961	GAAGATGCAACAGCCAATGGTCAAGAAGACTCCAAGGCCCCAGATGGGTC	3	-	48664414-48664463	3p21.31e	Homo sapiens solute carrier family 26, member 6 (SLC26A6), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	DKFZp586E1422	DKFZp586E1422
Homo sapiens	RefSeq	NM_134426.1	ILMN_5076	SLC26A6	NM_134426.2	NM_134426.2		65010	94721256	NM_134426.2	SLC26A6	NP_602298.2	ILMN_1785252	0000150692	A	2507	CAGTCAGGCTGGCAGTGGCGCGGTACAGGGAGGGAACTGGTGCATATTTT	3	-	48663185-48663234	3p21.31e	Homo sapiens solute carrier family 26, member 6 (SLC26A6), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	DKFZp586E1422	DKFZp586E1422
Homo sapiens	RefSeq	NM_007313.2	ILMN_22641	ABL1	NM_007313.2	NM_007313.2		25	62362411	NM_007313.2	ABL1	NP_009297.2	ILMN_1708922	0004590440	I	351	CCCACGTATATGCCATTTCCCTCTACGCTCGCTGACCGTTCTGGAAGATC	9	+	132579439-132579488	9q34.12a	Homo sapiens c-abl oncogene 1, receptor tyrosine kinase (ABL1), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8242749] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 12944467] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A cell cycle process that regulates transcription such that the target genes are transcribed during the S phase of the mitotic cell cycle [goid 115] [pmid 8242749] [evidence TAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 10391249] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8242749] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 8242749] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 10391249] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [pmid 9144171] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered [goid 51353] [pmid 12893824] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9144171] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8242749] [evidence NAS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9144171] [evidence IDA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11971963] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 9144171] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	JTK7; ABL; p150; bcr/abl; v-abl; c-ABL	JTK7; ABL; p150; bcr/abl; v-abl; c-ABL
Homo sapiens	RefSeq	XR_015968.1	ILMN_175892	LOC729404	XR_015968.1	XR_015968.1		729404	113426699	XR_015968.1	LOC729404		ILMN_3298294	0007320095	M	1676	TGTCACAGCATATGAATATGGTAAGATCAGACTCCCTAAGACTCTTCAGG	17	+	19957404-19957453	17p11.2d	PREDICTED: Homo sapiens misc_RNA (LOC729404), miscRNA.					
Homo sapiens	RefSeq	XM_945168.1	ILMN_139313	C10ORF93	XM_945168.1	XM_945168.1		255352	89033709	XM_945168.1	C10orf93	XP_950261.1	ILMN_1781654	0001410202	I	1340	GCAGTCCATTTTGACATATGGGGAATCAGCTTAAGTTGTATCTGAAAAGC				10q26.3f	PREDICTED: Homo sapiens chromosome 10 open reading frame 93, transcript variant 3 (C10orf93), mRNA.					
Homo sapiens	RefSeq	NR_002451.1	ILMN_20924	ABCA11	NR_002451.1	NR_002451.1		79963	73476379	NR_002451.1	ABCA11		ILMN_2232084	0002320403	S	1284	GTGGAGGATGTCCACCCTCTGTCTCAGGCCTTTTTCAAATTAAAGGCAGT	4	-	409705-409754	4p16.3d	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 11 (pseudogene) (ABCA11) on chromosome 4.				ABCA11P; MGC138274; MGC120312; FLJ14297; MGC120310; MGC132744; MGC120309; EST1133530	MGC120312; MGC120310; MGC120309; EST1133530; ABCA11P; MGC138274; FLJ14297; MGC132744
Homo sapiens	RefSeq	NM_017703.1	ILMN_24751	FBXL12	NM_017703.1	NM_017703.1		54850	8923178	NM_017703.1	FBXL12	NP_060173.1	ILMN_1693438	0000060768	S	1593	AGGGGCACCTGAGGGTCTGAGCCCCCTTATGAGTACCCAAGAAGGACTGT	19	-	9921152-9921201	19p13.2c	Homo sapiens F-box and leucine-rich repeat protein 12 (FBXL12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		Fbl12; FLJ20188	FLJ20188; Fbl12
Homo sapiens	RefSeq	NR_024120.1	ILMN_366375	ELP2P	NR_024120.1	NR_024120.1		100131454	198041708	NR_024120.1	ELP2P		ILMN_3247543	0000630184	S	2288	TAGGATGCAGGGGGAATGGGATTGATGGGCATGGGGTATACTGTGAAAGG	17	+	658187-658236	17p13.3f	Homo sapiens endozepine-like peptide 2 pseudogene (ELP2P), non-coding RNA.					
Homo sapiens	RefSeq	XM_941764.1	ILMN_42359	LOC652335	XM_941764.1	XM_941764.1		652335	89071320	XM_941764.1	LOC652335	XP_946857.1	ILMN_1796743	0002600241	S	170	TTCAGAACCCAGAGTCCCTTATGACAGAGCCTTTCAGACCTAAGCAGCTC					PREDICTED: Homo sapiens similar to LIM and senescent cell antigen-like domains 1 (LOC652335), mRNA.					
Homo sapiens	RefSeq	XM_928072.1	ILMN_137491	LOC645010	XM_928072.1	XM_928072.1		645010	88942353	XM_928072.1	LOC645010	XP_933165.1	ILMN_1768466	0003440612	S	202	GGTGGTTCTGGGTGCTGCGGTTCTTTCAGTAAAGAACTTCCAGGAGTTTC	1	-	9810659-9810708	1p36.22d	PREDICTED: Homo sapiens hypothetical protein LOC645010 (LOC645010), mRNA.					
Homo sapiens	RefSeq	NM_178448.2	ILMN_24887	C9ORF140	NM_178448.2	NM_178448.2		89958	31341967	NM_178448.2	C9orf140	NP_848543.1	ILMN_1702197	0001010470	S	3329	AGCGTCCCTGGGCTCTATCCGCGAGGTGCCAGTAGCGTGTGCAGGTACAT	9	-	139076854-139076903	9q34.3e	Homo sapiens chromosome 9 open reading frame 140 (C9orf140), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	XM_939650.1	ILMN_34270	LOC650566	XM_939650.1	XM_939650.1		650566	89042884	XM_939650.1	LOC650566	XP_944743.1	ILMN_1717733	0005810259	S	1043	AACGGCGAAGCGCGGCCCGGCTGGGGCTCGGGCTCCCGGCACGCTCTTAA					PREDICTED: Homo sapiens hypothetical protein LOC650566 (LOC650566), mRNA.					
Homo sapiens	RefSeq	XM_933525.1	ILMN_42467	LOC646302	XM_933525.1	XM_933525.1		646302	89024818	XM_933525.1	LOC646302	XP_938618.1	ILMN_1726696	0007380035	S	121	GCTACCTCCTCTTTAAAAGAAGTCGTTCAGCTGGGGCGGGCTGGCGCTGC	7	+	18092417-18092466		PREDICTED: Homo sapiens hypothetical protein LOC646302 (LOC646302), mRNA.					
Homo sapiens	RefSeq	NM_181489.4	ILMN_28092	ZNF445	NM_181489.5	NM_181489.5		353274	148529027	NM_181489.5	ZNF445	NP_852466.1	ILMN_1665397	0006250446	S	8661	GTGGTAAAGAAGCCGGTCAAAACCAAGATGGCAATGAAAGTGACCTCTGG	3	-	44482880-44482929	3p21.32c	Homo sapiens zinc finger protein 445 (ZNF445), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF168; MGC126535; ZKSCAN15	ZNF168; MGC126535
Homo sapiens	RefSeq	XM_372273.4	ILMN_37756	LOC644379	XM_372273.4	XM_372273.4		644379	89060468	XM_372273.4	LOC644379	XP_372273.4	ILMN_1770896	0007570164	S	290	TAGAGGAACGGCGTTCGCCAGCTCAATGGGAAAGGAAGTCGCTTGCGAAC	X	+	37336-37385		PREDICTED: Homo sapiens similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1) (LOC644379), mRNA.					
Homo sapiens	RefSeq	XM_942291.1	ILMN_137338	LOC222967	XM_942291.1	XM_942291.1		222967	89076966	XM_942291.1	LOC222967	XP_947384.1	ILMN_1780613	0001770619	I	932	TAAGTTGCCCATTTGAGAACCTGCAGGAAGGGGAGGAAGGTGTGGGGTGA				7p22.1b	PREDICTED: Homo sapiens hypothetical protein LOC222967 (LOC222967), mRNA.					
Homo sapiens	RefSeq	NM_024707.2	ILMN_183881	GEMIN7	NM_024707.2	NM_024707.2		79760	55953070	NM_024707.2	GEMIN7	NP_078983.1	ILMN_2327181	0000110605	A	1068	CTATACCGACGGGGATGGAGTCATCTTTAGGGGCTGGTAGGGTGGTTATC	19	+	45594203-45594252	19q13.32a	Homo sapiens gem (nuclear organelle) associated protein 7 (GEMIN7), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12065586] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12065586] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [pmid 12065586] [evidence IDA]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 12065586] [evidence TAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12065586] [evidence IPI]	SIP3	SIP3
Homo sapiens	RefSeq	NM_001005282.1	ILMN_183034	OR5M8	NM_001005282.1	NM_001005282.1		219484	52627161	NM_001005282.1	OR5M8	NP_001005282.1	ILMN_2199971	0003310735	S	102	CATGGTCACGGTGGCAGGGAACCTTGGCATGATTGTCCTCATCCAGGCCA	11	-	56258695-56258744	11q11c	Homo sapiens olfactory receptor, family 5, subfamily M, member 8 (OR5M8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-194	OR11-194
Homo sapiens	RefSeq	NM_001004344.1	ILMN_979	MGC44328	NM_001004344.1	NM_001004344.1		440757	51972265	NM_001004344.1	MGC44328	NP_001004344.1	ILMN_1678234	0007040373	S	395	GCACCTAGGCAGCTTTATGGCAGGCGGAGATGCACCACCCACATCCTCTT	20	+	18309796-18309845	20p11.23d	Homo sapiens hypothetical gene supported by BC033985 (MGC44328), mRNA.					
Homo sapiens	RefSeq	NM_052901.2	ILMN_15060	SLC25A25	NM_052901.2	NM_052901.2		114789	56699400	NM_052901.2	SLC25A25	NP_443133.2	ILMN_2327947	0004730538	A	2603	CATATTTATGTTCATGGTTGATTGTACCTTCCCAAGCCCGCCCAGTGGGA	9	+	129910708-129910757	9q34.11a	Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 (SLC25A25), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC105138; KIAA1896; SCAMC-2; RP11-395P17.4; MCSC; MGC119517; MGC119514; MGC119516; MGC119515; PCSCL	MGC105138; KIAA1896; SCAMC-2; RP11-395P17.4; MCSC; MGC119517; MGC119514; MGC119516; MGC119515; PCSCL
Homo sapiens	RefSeq	NM_052901.2	ILMN_15060	SLC25A25	NM_052901.2	NM_052901.2		114789	56699400	NM_052901.2	SLC25A25	NP_443133.2	ILMN_1791728	0000010487	A	3018	CTGCCCTTGCTTAACAATGCCGGCCAACTGGCGACCTCACGGTTGCACTT	9	+	129911123-129911172	9q34.11a	Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 (SLC25A25), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC105138; KIAA1896; SCAMC-2; RP11-395P17.4; MCSC; MGC119517; MGC119514; MGC119516; MGC119515; PCSCL	MGC105138; KIAA1896; SCAMC-2; RP11-395P17.4; MCSC; MGC119517; MGC119514; MGC119516; MGC119515; PCSCL
Homo sapiens	RefSeq	NM_012465.2	ILMN_175468	TLL2	NM_012465.2	NM_012465.2		7093	22547222	NM_012465.2	TLL2	NP_036597.1	ILMN_2206307	0006180075	S	6317	CCCAGGGAAGCCAAAAGATGGGACACCCCTGCTGTAAAGTTTCATATCAC	10	-	98127426-98127475	10q24.1a	Homo sapiens tolloid-like 2 (TLL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC133312; KIAA0932; MGC133313	MGC133312; MGC133313; KIAA0932
Homo sapiens	RefSeq	NM_001204.5	ILMN_29007	BMPR2	NM_001204.5	NM_001204.5		659	72376969	NM_001204.5	BMPR2	NP_001195.2	ILMN_1789095	0006060475	S	10880	CTCTTAGGGTGTTGTAGTAGCTGAAACATGGAGATGCGTAGCTGTCATGC	2	+	203140150-203140199	2q33.1g	Homo sapiens bone morphogenetic protein receptor, type II (serine/threonine kinase) (BMPR2), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17356069] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 12045205] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISS]	The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence ISS]; The process that reduces the force with which blood travels through the systemic arterial circulatory system [goid 3085] [pmid 18364108] [evidence IMP]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 12045205] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence ISS]; The process that modulates the force with which blood travels through the lungs. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 14916] [pmid 18364108] [evidence IMP]; The process that modulates the force with which blood travels through the lungs. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 14916] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [pmid 18436533] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 18436533] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 12045205] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 11502704] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [pmid 18436533] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of vasoconstriction [goid 45906] [evidence ISS]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence ISS]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15188402] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	BRK-3; BMPR3; BMPR-II; BMR2; TRG10; PPH1; T-ALK	BRK-3; BMPR3; BMPR-II; BMR2; TRG10; PPH1; T-ALK
Homo sapiens	RefSeq	XM_941146.1	ILMN_138683	LOC651886	XM_941146.1	XM_941146.1		651886	89043092	XM_941146.1	LOC651886	XP_946239.1	ILMN_1767632	0001770538	S	2909	GACCCTTCAAGGGACCCTGAGAATCTCCGAGTGTGGGCAGTGGGGTCGTG					PREDICTED: Homo sapiens hypothetical protein LOC651886 (LOC651886), mRNA.					
Homo sapiens	RefSeq	XM_927558.1	ILMN_42769	LOC644413	XM_927558.1	XM_927558.1		644413	89042032	XM_927558.1	LOC644413	XP_932651.1	ILMN_1768911	0004230731	S	9	GGAGAGATATTCACACCTCAGAAGCCTTATCCTTCTTTTCAATCAAACCC	17	+	134565-134614		PREDICTED: Homo sapiens similar to keratin associated protein 3-3 (LOC644413), mRNA.					
Homo sapiens	RefSeq	NM_173358.2	ILMN_26039	SSX7	NM_173358.2	NM_173358.2		280658	28559019	NM_173358.2	SSX7	NP_775494.1	ILMN_1726257	0004060440	S	577	TGCCCTCCAGGAAAACCAAGTACCTCTGAGAAGATTAACAAGACATCCGG	X	-	52691317-52691318:52694036-52694083	Xp11.22b	Homo sapiens synovial sarcoma, X breakpoint 7 (SSX7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	XM_930640.1	ILMN_137341	LOC642280	XM_930640.1	XM_930640.1		642280	88972054	XM_930640.1	LOC642280	XP_935733.1	ILMN_1658571	0003440093	I	1	CTTTTGCGTCAGGCTTCTGCCTGAGCTCGGTTAGGGCCTCACCGACCTGC	4	+	196400-196449	4p16.3d	PREDICTED: Homo sapiens similar to zinc finger protein 595, transcript variant 2 (LOC642280), mRNA.					
Homo sapiens	RefSeq	NM_001014989.1	ILMN_10381	LAT	NM_001014989.1	NM_001014989.1		27040	62739158	NM_001014989.1	LAT	NP_001014989.2	ILMN_2281320	0004480255	I	32	TGGATATGGAGGCCACGGCTGCCAGCTGGCAGGTGGCTGTCCCCGTCTTG	16	+	28903679-28903728	16p11.2e	Homo sapiens linker for activation of T cells (LAT), transcript variant 4, mRNA.	An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IEA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [pmid 12646565] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11607830] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12646565] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 14722116] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 15100278] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 15100278] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 12646565] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 12646565] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 12646565] [evidence IMP]; The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell activation [goid 50863] [pmid 12646565] [evidence IMP]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9489702] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16938345] [evidence IPI]	pp36; LAT1	pp36; LAT1
Homo sapiens	RefSeq	NM_018046.3	ILMN_176602	AGGF1	NM_018046.3	NM_018046.3		55109	46397362	NM_018046.3	AGGF1	NP_060516.2	ILMN_2064917	0000070239	S	4044	GGACCCCTCCAAATAGGTTTTGCTTCTGGTGAATCTTGGTCATTGGGTTA	5	+	76360616-76360665	5q13.3d	Homo sapiens angiogenic factor with G patch and FHA domains 1 (AGGF1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14961121] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14961121] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 14961121] [evidence IDA]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [pmid 15905966] [evidence TAS]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 14961121] [evidence IDA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 15486042] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 14961121] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases angiogenesis [goid 45766] [pmid 14961121] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14961121] [evidence IPI]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [pmid 14961121] [evidence IDA]	VG5Q; FLJ10283; HUS84971; GPATCH7; HSU84971; GPATC7	VG5Q; FLJ10283; HUS84971; GPATCH7; HSU84971; GPATC7
Homo sapiens	RefSeq	NM_001004705.1	ILMN_183643	OR4D10	NM_001004705.1	NM_001004705.1		390197	52317238	NM_001004705.1	OR4D10	NP_001004705.1	ILMN_2085258	0005810754	S	534	CTGTGATGTCCACCGGGTCCTCAAACTGGCCCATACAGACATTTTCATAC	11	+	59002012-59002061	11q12.1d	Homo sapiens olfactory receptor, family 4, subfamily D, member 10 (OR4D10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR4D10P; OR11-251; OST711	OR4D10P; OST711; OR11-251
Homo sapiens	RefSeq	NM_153747.1	ILMN_1707	PIGC	NM_153747.1	NM_153747.1		5279	24430185	NM_153747.1	PIGC	NP_714969.1	ILMN_2397571	0004070136	A	916	TGGTGACATTTGCCATTCAGATTTTTGCCCTGTGGCCCATGTTGCAGAAG	1	-	172411108-172411157	1q24.3d	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class C (PIGC), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 8806613] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]	GPI2; MGC2049	GPI2; MGC2049
Homo sapiens	RefSeq	NM_153747.1	ILMN_1707	PIGC	NM_153747.1	NM_153747.1		5279	24430185	NM_153747.1	PIGC	NP_714969.1	ILMN_1723632	0000580601	A	1056	GTGGGAGCCGTACTCTTTGCCCTTCTGCTGATGTCTATCTCATGTCTGTG	1	-	172410968-172411017	1q24.3d	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class C (PIGC), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 8806613] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [evidence IEA]	GPI2; MGC2049	GPI2; MGC2049
Homo sapiens	RefSeq	XM_935705.1	ILMN_40819	LOC641823	XM_935705.1	XM_935705.1		641823	89026693	XM_935705.1	LOC641823	XP_940798.1	ILMN_1789314	0001050376	I	2705	CCCTGTCCTCCAGATACTGGGGAATCTATTCTCTGATTGGTTATTGCTGC					PREDICTED: Homo sapiens similar to SH3 domain binding protein CR16, transcript variant 1 (LOC641823), mRNA.					
Homo sapiens	RefSeq	NM_001013626.1	ILMN_20079	LRRC67	NM_001013626.2	NM_001013626.2		286187	141802900	NM_001013626.2	LRRC67	NP_001013648.1	ILMN_1702413	0000650671	S	490	AGGAGAACTAAGAGAGCTTCATGTTGAGAATCAGAGGCTTCCCCTTGGGG	8	-	68087787-68087836	8q13.1b-q13.2a	Homo sapiens leucine rich repeat containing 67 (LRRC67), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_945420.1	ILMN_34755	TBC1D24	NM_020705.1	NM_020705.1		57465	89886452	NM_020705.1	TBC1D24	NP_065756.1	ILMN_1780197	0003870138	A	1861	CCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGG	16	+	2491019-2491068	16p13.3d	Homo sapiens TBC1 domain family, member 24 (TBC1D24), mRNA. XM_945422	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	KIAA1171; MGC102885	
Homo sapiens	RefSeq	NM_020705.1	ILMN_34755	TBC1D24	NM_020705.1	NM_020705.1		57465	89886452	NM_020705.1	TBC1D24	NP_065756.1	ILMN_2060212	0003120161	S	3932	ATTTTTCTGGCGAGTTAAGTCCAGCAGGTTCTGCGTGGCTGCCCCCAGGG	16	+	2493090-2493139	16p13.3d	Homo sapiens TBC1 domain family, member 24 (TBC1D24), mRNA. XM_945422	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	KIAA1171; MGC102885	KIAA1171; MGC102885
Homo sapiens	RefSeq	XM_936778.1	ILMN_46436	LOC647718	XM_936778.1	XM_936778.1		647718	88944597	XM_936778.1	LOC647718	XP_941871.1	ILMN_1774044	0005870253	S	495	GAAGTCCACGGCTGAACTCCTCACCCACAGTAGCCCCCAGAATGCAAAGG					PREDICTED: Homo sapiens hypothetical protein LOC647718 (LOC647718), mRNA.					
Homo sapiens	RefSeq	NM_001013355.1	ILMN_10457	OR2G6	NM_001013355.1	NM_001013355.1		391211	61656209	NM_001013355.1	OR2G6	NP_001013373.1	ILMN_1766087	0001340010	S	561	GGCCTGTGTGGATACGACTTTCAACGAGGCAGAACTCTTTGTGGCCAGTG	1	+	246752131-246752180	1q44f	Homo sapiens olfactory receptor, family 2, subfamily G, member 6 (OR2G6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	XM_001717283.1	ILMN_346948	LOC100128750	XM_001717283.1	XM_001717283.1		100128750	169173246	XM_001717283.1	LOC100128750	XP_001717335.1	ILMN_3190337	0001780609	A	355	GGACACAAAAACACACGCTCCCGAGATCCACCCTCCCCGGGCCACACTGT				8p12e	PREDICTED: Homo sapiens hypothetical protein LOC100128750 (LOC100128750), mRNA.					
Homo sapiens	RefSeq	XM_001717283.1	ILMN_346948	LOC100128750	XM_001717283.1	XM_001717283.1		100128750	169173246	XM_001717283.1	LOC100128750	XP_001717335.1	ILMN_3266802	0006560278	M	582	GCTGGAAGCACGCTTGAAAAAGAAAGGGGGCCTGGGCTTTGCACCAGCTT				8p12e	PREDICTED: Homo sapiens hypothetical protein LOC100128750 (LOC100128750), mRNA.					
Homo sapiens	RefSeq	NM_032705.2	ILMN_6189	C1ORF97	NM_032705.2	NM_032705.2		84791	32261296	NM_032705.2	C1orf97	NP_116094.1	ILMN_1808769	0006510360	S	515	CTCAGCGTTTTGGTGTAAGGCGGCCAAAGAAGGATGCGGAGCCCAGCACT	1	+	209672321-209672370	1q32.3a	Homo sapiens chromosome 1 open reading frame 97 (C1orf97), mRNA.				MGC14801; FLJ27348; RP11-318L16.3; FLJ27347	MGC14801; FLJ27348; RP11-318L16.3; FLJ27347
Homo sapiens	RefSeq	XM_927750.1	ILMN_165216	LOC732391	XM_001133215.1	XM_001133215.1		732391	113430818	XM_001133215.1	LOC732391	XP_001133215.1	ILMN_1687199	0000670730	S	1119	ACCTTCAATTTCATACCCAAGGAAGGTCTTGAATTTCAAAGGAAAATCAA				17p12a	PREDICTED: Homo sapiens similar to F-box and WD-40 domain protein 10 (LOC732391), mRNA.					
Homo sapiens	RefSeq	NM_152270.2	ILMN_2517	SLFN11	NM_152270.2	NM_152270.2		91607	42476006	NM_152270.2	SLFN11	NP_689483.2	ILMN_1752520	0001990379	S	4378	CTTACTCTACTGATTTCCCCCCAGACTGTGATTTTTGAACTTCCTTGCCT	17	-	30701913-30701962	17q12a	Homo sapiens schlafen family member 11 (SLFN11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ34922; SLFN8/9	FLJ34922; SLFN8/9
Homo sapiens	RefSeq	NM_152270.2	ILMN_2517	SLFN11	NM_152270.2	NM_152270.2		91607	42476006	NM_152270.2	SLFN11	NP_689483.2	ILMN_2162860	0003440358	S	4424	GCCTTTCTCCTGTCTTTCTGTGTTTATTCATGGAATCCCAGTTATCTGGG	17	-	30701867-30701916	17q12a	Homo sapiens schlafen family member 11 (SLFN11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ34922; SLFN8/9	FLJ34922; SLFN8/9
Homo sapiens	RefSeq	NM_006170.2	ILMN_28955	NOP2	NM_006170.2	NM_006170.2		4839	76150622	NM_006170.2	NOP2	NP_006161.2	ILMN_3226904	0001010630	A	2345	CTTGGAAGGGCCAAGGGGGTTGAGAAGCAGCAGTTGCCAGAGCAGCCTTT	12	-	6666303-6666352	12p13.31d	Homo sapiens NOP2 nucleolar protein homolog (yeast) (NOP2), transcript variant 1, mRNA.				p120; NOP120; MGC149288; NSUN1; MGC117384; MGC149287	p120; NOP120; MGC149288; NSUN1; MGC117384; MGC149287
Homo sapiens	RefSeq	NM_006170.2	ILMN_28955	NOP2	NM_006170.2	NM_006170.2		4839	76150622	NM_006170.2	NOP2	NP_006161.2	ILMN_2328433	0006960538	A	2156	GCCGAAGGGATCAGGGAGCCAAAGGTGACTGGGAAGCTAAAGCAACGATC	12	-	6666492-6666541	12p13.31d	Homo sapiens NOP2 nucleolar protein homolog (yeast) (NOP2), transcript variant 1, mRNA.				p120; NOP120; MGC149288; NSUN1; MGC117384; MGC149287	p120; NOP120; MGC149288; NSUN1; MGC117384; MGC149287
Homo sapiens	RefSeq	NM_015657.3	ILMN_7547	ABCA12	NM_015657.3	NM_015657.3		26154	30795236	NM_015657.3	ABCA12	NP_056472.2	ILMN_2361400	0004900711	A	7600	AGGACTGCAATAGAGAGGGCAATTTACCCTGGTGGTACACGGAACCTAGA	2	-	215796701-215796750	2q35a	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 12 (ABCA12), transcript variant 2, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12697999] [evidence NAS]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [pmid 12915478] [evidence NAS]; Any process involved in the maintenance of an internal equilibrium at the level of the cell [goid 19725] [pmid 12697999] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12697999] [evidence NAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	LI2; FLJ41584; ICR2B; DKFZp434G232	LI2; FLJ41584; ICR2B; DKFZp434G232
Homo sapiens	RefSeq	XM_943161.1	ILMN_3881	SPAG11B	NM_058201.2	NM_058201.2		10407	126131096	NM_058201.2	SPAG11B	NP_478108.2	ILMN_1719772	0006020017	A	457	CTGGTGAGAAAAAGCGTGACATTTGCTCTGATCCCTGGAATAGGTGTTGC	8	-	7308477-7308526	8p23.1e	Homo sapiens sperm associated antigen 11B (SPAG11B), transcript variant D, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10698202] [evidence NAS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8167223] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC61846; EP2C; EP2; HE2C; EP2D; SPAG11; SPAG11B; HE2	
Homo sapiens	RefSeq	NM_005255.1	ILMN_21151	GAK	NM_005255.1	NM_005255.1		2580	4885250	NM_005255.1	GAK	NP_005246.1	ILMN_1813775	0007210767	I	4241	ACGCTGCTGGCGCTCATGGGCCCTGGTGTTTGCACCGCACTTTGTAATCA	4	-	833106-833155	4p16.3c	Homo sapiens cyclin G associated kinase (GAK), mRNA. XM_943600 XM_943603	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9299234] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MGC99654; FLJ40395	MGC99654; FLJ40395
Homo sapiens	RefSeq	NM_058163.1	ILMN_20635	TSR2	NM_058163.1	NM_058163.1		90121	24308387	NM_058163.1	TSR2	NP_477511.1	ILMN_1670948	0006250390	S	1176	GGAATTCGAAGACCTTGGCTAGGTGGTGAGCTTGGAAGAGCTGGGCTTTG	X	+	54471581-54471630	Xp11.22a	Homo sapiens TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) (TSR2), mRNA.		Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		RP1-112K5.2; DT1P1A10; MGC20451	RP1-112K5.2; MGC20451; DT1P1A10
Homo sapiens	RefSeq	XM_001726989.1	ILMN_349098	LOC284890	XM_001726989.1	XM_001726989.1		284890	169215820	XM_001726989.1	LOC284890	XP_001727041.1	ILMN_3292034	0002190706	M	1530	AACGACCCGGAGCGGACTGCTGTATGCTATAGGGGAACATGATGCTCTCA				22q11.23a	PREDICTED: Homo sapiens similar to kelch-like 5 (Drosophila) (LOC284890), mRNA.					
Homo sapiens	RefSeq	XM_001133074.2	ILMN_178351	FLJ77644	XM_001133074.2	XM_001133074.2		728772	169211131	XM_001133074.2	FLJ77644	XP_001133074.1	ILMN_3197549	0002140497	A	312	GGATGAGAACAAGTCAATCCTGTCCTCCAAACCAGCCATTGGCAGCAAGG	17	+	21579-21628		PREDICTED: Homo sapiens similar to transmembrane protein 106A, transcript variant 3 (FLJ77644), mRNA.					
Homo sapiens	RefSeq	NM_001004057.1	ILMN_9882	GRK4	NM_001004057.1	NM_001004057.1		2868	51873046	NM_001004057.1	GRK4	NP_001004057.1	ILMN_2405400	0002490343	A	2086	GGCGCCAGGAAGGAGCATGTGTTAGCGTCTCGTCCCACCTGGAATTGTAA	4	+	2991339-2991356:2993939-2993970	4p16.3a	Homo sapiens G protein-coupled receptor kinase 4 (GRK4), transcript variant 3, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 1338872] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GRK4a; IT11; GPRK2L; GPRK4	GRK4a; IT11; GPRK2L; GPRK4
Homo sapiens	RefSeq	NM_173578.1	ILMN_16934	C11ORF72	NM_173578.1	NM_173578.1		283135	27734820	NM_173578.1	C11orf72	NP_775849.1	ILMN_1793570	0002650707	S	2040	TCTGACCTGCTTCCTCATGGCTGGTTGGTGCCTGTTGTCCCGGAGTGACA	11	-	67127268-67127317	11q13.2a	Homo sapiens chromosome 11 open reading frame 72 (C11orf72), mRNA.				MGC129825; MGC129824; FLJ90834	MGC129825; MGC129824; FLJ90834
Homo sapiens	RefSeq	NM_138551.2	ILMN_28774	TSLP	NM_138551.2	NM_138551.2		85480	42544204	NM_138551.2	TSLP	NP_612561.1	ILMN_1801098	0000070053	I	49	CTTCTCTCTGACTCTCGACTTGTGTTCCCCGCTCCTCCCTGACCTTCCTC	5	+	110436973-110437022	5q22.1a	Homo sapiens thymic stromal lymphopoietin (TSLP), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]		
Homo sapiens	RefSeq	NM_020805.1	ILMN_22647	KLHL14	NM_020805.1	NM_020805.1		57565	55741642	NM_020805.1	KLHL14	NP_065856.1	ILMN_2168564	0006250523	S	3918	GTACTCTGTGGGAAAATCTCAGCTGACATCATGAATAGAATGAGGTCTGC	18	-	30252927-30252976	18q12.1e	Homo sapiens kelch-like 14 (Drosophila) (KLHL14), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_020805.1	ILMN_22647	KLHL14	NM_020805.1	NM_020805.1		57565	55741642	NM_020805.1	KLHL14	NP_065856.1	ILMN_1748123	0000780300	S	3707	GGCAGAGCACGTCAAGATAAATGGGTATACTGGAATCCGATGCCGTTTCT	18	-	30253138-30253187	18q12.1e	Homo sapiens kelch-like 14 (Drosophila) (KLHL14), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_000234.1	ILMN_8009	LIG1	NM_000234.1	NM_000234.1		3978	4557718	NM_000234.1	LIG1	NP_000225.1	ILMN_1706779	0005050113	S	2733	CTTCCCTCGGTTTATTCGAGTCCGTGAAGACAAGCAGCCGGAGCAGGCCA	19	-	53310955-53311004	19q13.32c	Homo sapiens ligase I, DNA, ATP-dependent (LIG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8696349] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10559261] [evidence EXP]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8696349] [evidence TAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8696349] [evidence TAS]; The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [pmid 9809069] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8696349] [evidence TAS]; Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m) [goid 3910] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC130025; MGC117397	MGC130025; MGC117397
Homo sapiens	RefSeq	NM_000070.2	ILMN_25522	CAPN3	NM_024344.1	NM_024344.1		825	27765071	NM_024344.1	CAPN3	NP_077320.1	ILMN_1687971	0003870441	A	2971	CAAACCCTTGTCCCTTTGCCATGTGGAGGAAAGTGCCTGCCTCTGGTCCG	15	+	40491480-40491529	15q15.1d	Homo sapiens calpain 3, (p94) (CAPN3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 7720071] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9642272] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9642272] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 7720071] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [pmid 9642272] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 7720071] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	CANP3; MGC14344; p94; LGMD2; MGC10767; CANPL3; MGC11121; MGC4403; LGMD2A; nCL-1	CANP3; MGC14344; p94; LGMD2; MGC10767; CANPL3; MGC11121; MGC4403; LGMD2A; nCL-1
Homo sapiens	RefSeq	NM_152909.2	ILMN_16141	ZNF548	NM_152909.2	NM_152909.2		147694	34303961	NM_152909.2	ZNF548	NP_690873.1	ILMN_1728228	0002810100	S	3102	CTCCCAGTCCATAGGTTGCTTTTTCGCTCTGTTGATTGTGTCCTTTGATG	19	+	57912507-57912556	19q13.43b	Homo sapiens zinc finger protein 548 (ZNF548), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ32932	FLJ32932
Homo sapiens	RefSeq	NM_005971.2	ILMN_25095	FXYD3	NM_005971.2	NM_005971.2		5349	11612675	NM_005971.2	FXYD3	NP_005962.1	ILMN_2376050	0006760440	A	1251	CCTGAGACATGAACCCAAAAAGAGACCCACAATAAACTCGTGACTTGTCC	19	+	40307013-40307062	19q13.11c-q13.12a	Homo sapiens FXYD domain containing ion transport regulator 3 (FXYD3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7836447] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [pmid 7836447] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [pmid 7836447] [evidence TAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC111076; MAT-8; MAT8; PLML	MGC111076; MAT-8; MAT8; PLML
Homo sapiens	RefSeq	NM_005971.2	ILMN_25095	FXYD3	NM_005971.2	NM_005971.2		5349	11612675	NM_005971.2	FXYD3	NP_005962.1	ILMN_1791580	0002060687	A	989	GCCCCTGTGACCCTCTCACTTACCCCGAGACCTCACTTTATTACAAGATC	19	+	40306751-40306800	19q13.11c-q13.12a	Homo sapiens FXYD domain containing ion transport regulator 3 (FXYD3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7836447] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [pmid 7836447] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [pmid 7836447] [evidence TAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC111076; MAT-8; MAT8; PLML	MGC111076; MAT-8; MAT8; PLML
Homo sapiens	RefSeq	XM_928223.1	ILMN_39959	LOC645186	XM_928223.1	XM_928223.1		645186	89035436	XM_928223.1	LOC645186	XP_933316.1	ILMN_1688316	0003370445	S	121	GTTCTTTATTCAGATGTCAATTGTGGGCATTTCGATCCTTGTTTCAGAAC	12	+	25079807-25079856		PREDICTED: Homo sapiens hypothetical protein LOC645186 (LOC645186), mRNA.					
Homo sapiens	RefSeq	NM_032886.1	ILMN_170622	TMEM137	XR_017971.1	XR_017971.1		84972	113422857	XR_017971.1	TMEM137		ILMN_1657701	0000430605	S	1928	GCTAGAGGCCAGGATTTTGAGACCAGCTTCGGCAATACGGTGAGACCTTG				11q13.1e	PREDICTED: Homo sapiens transmembrane protein 137 (TMEM137), misc RNA.					
Homo sapiens	RefSeq	NM_001040702.1	ILMN_174773	DEFB104B	NM_001040702.1	NM_001040702.1		503618	103485136	NM_001040702.1	DEFB104B	NP_001035792.1	ILMN_2177234	0006450180	S	103	GTGGTTATGGGACTGCCCGTTGCCGGAAGAAATGTCGCAGCCAAGAATAC	8	-	7327958-7328007	8p23.1e	Homo sapiens defensin, beta 104B (DEFB104B), mRNA.					
Homo sapiens	RefSeq	XR_038241.1	ILMN_342227	LOC100133773	XR_038241.1	XR_038241.1		100133773	169209241	XR_038241.1	LOC100133773		ILMN_3241426	0003830626	S	393	GGAAGCCAAATAGAAAGGTACCTGGGTTCAACAGAAGCACCAGCCTGCTC					PREDICTED: Homo sapiens misc_RNA (LOC100133773), miscRNA.					
Homo sapiens	Unigene	Hs.35496	ILMN_72429	HS.35496	Hs.35496		Hs.35496		27827848	BX095709			ILMN_1916390	0001430433	S	335	AGAGACAAGTGTGGAGCTGAAGGAATTGTAGGGAAATAGAGCTGGAGCCC	2	-	186744423-186744472		BX095709 Soares pineal gland 3NbHPG Homo sapiens cDNA clone IMAGp998I24464, mRNA sequence					
Homo sapiens	Unigene	Hs.529962	ILMN_101350	HS.529962	Hs.529962		Hs.529962		8168306	AW977064			ILMN_1897296	0002970711	S	439	TTGCCTGGGTAGAGTAAGCTCCTTTTGTCCTGGTAAGGTGTGGGCAAAGG	6	-	111326151-111326200		EST389173 MAGE resequences, MAGO Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_001527.1	ILMN_28766	HDAC2	NM_001527.2	NM_001527.2		3066	116284375	NM_001527.2	HDAC2	NP_001518.2	ILMN_1767747	0006900750	S	1716	AGGAACCAAATCAGAACAGCTCAGCAACCCCTGAATTTGACAGTCTCACC	6	-	114368898-114368914:114368915-114368945:114369565-114369566	6q22.1a	Homo sapiens histone deacetylase 2 (HDAC2), mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A compact and highly condensed form of chromatin [goid 792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12711221] [evidence TAS]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8917507] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12711221] [evidence TAS]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8917507] [evidence TAS]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 12711221] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 11062478] [evidence IPI]	YAF1; RPD3	YAF1; RPD3
Homo sapiens	RefSeq	NM_001527.2	ILMN_28766	HDAC2	NM_001527.2	NM_001527.2		3066	116284375	NM_001527.2	HDAC2	NP_001518.2	ILMN_3251283	0006330767	S	6105	GTTATGAGGTAAAGGTAGATAGATGGGTGAGAGTGGTGCCAGGGGAAGTG	6	-	114364509-114364558	6q22.1a	Homo sapiens histone deacetylase 2 (HDAC2), mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A compact and highly condensed form of chromatin [goid 792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12711221] [evidence TAS]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8917507] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12711221] [evidence TAS]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8917507] [evidence TAS]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 12711221] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 11062478] [evidence IPI]	YAF1; RPD3	YAF1; RPD3
Homo sapiens	RefSeq	XM_936861.1	ILMN_41078	LOC647802	XM_936861.1	XM_936861.1		647802	89031732	XM_936861.1	LOC647802	XP_941954.1	ILMN_1807851	0007210709	S	779	TCCAGGGAACACAGACCCTCAGTCACATGGTACAGCCACCATCTACGGCC					PREDICTED: Homo sapiens hypothetical protein LOC647802 (LOC647802), mRNA.					
Homo sapiens	RefSeq	NM_018190.2	ILMN_29538	BBS7	NM_176824.1	NM_176824.1		55212	29029556	NM_176824.1	BBS7	NP_789794.1	ILMN_1776656	0000070528	A	1995	GCTAATCCACCCAAAGCTGGAGTACCAGTTGCTTTTGGCTAAGAAAGTGC	4	-	122969026-122969075	4q27c	Homo sapiens Bardet-Biedl syndrome 7 (BBS7), transcript variant 1, mRNA.	A protein complex that associates with the primary cilium and is involved in cilium biogenesis; consists of seven conserved proteins: BBS1, BBS2, BBS4, BBS5, BBS7, BBS8 and BBS9 [goid 34464] [pmid 17574030] [evidence IDA]	The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence ISS]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence ISS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISS]; The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48547] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of dispersed pigment granules towards the center of the cell [goid 51877] [evidence ISS]; A process that is carried out at the cellular level and by which the structure of a cilium is organized. Morphogenesis pertains to the creation of form [goid 60271] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18000879] [evidence IPI]	FLJ10715; BBS2L1	FLJ10715; BBS2L1
Homo sapiens	RefSeq	NM_176824.1	ILMN_29538	BBS7	NM_176824.1	NM_176824.1		55212	29029556	NM_176824.1	BBS7	NP_789794.1	ILMN_1775012	0002230112	I	3064	CATGCTGTAACCAGTGGAGCTATTCAGCGTGCTTCAAGTGAAGAGTGCAG	4	-	122965673-122965722	4q27c	Homo sapiens Bardet-Biedl syndrome 7 (BBS7), transcript variant 1, mRNA.	A protein complex that associates with the primary cilium and is involved in cilium biogenesis; consists of seven conserved proteins: BBS1, BBS2, BBS4, BBS5, BBS7, BBS8 and BBS9 [goid 34464] [pmid 17574030] [evidence IDA]	The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence ISS]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence ISS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISS]; The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48547] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of dispersed pigment granules towards the center of the cell [goid 51877] [evidence ISS]; A process that is carried out at the cellular level and by which the structure of a cilium is organized. Morphogenesis pertains to the creation of form [goid 60271] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18000879] [evidence IPI]	FLJ10715; BBS2L1	FLJ10715; BBS2L1
Homo sapiens	RefSeq	NM_181986.1	ILMN_16747	LILRA5	NM_181879.1	NM_181879.1		353514	32895360	NM_181879.1	LILRA5	NP_870994.1	ILMN_1726545	0000620136	A	617	AAGCTCTCCTGGACCTTGGACTCACAGCTGACCCCCAGTGGGCAGTTCCA	19	-	59514620-59514669	19q13.42a	Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5 (LILRA5), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	LIR9; ILT11; CD85F; LILRB7; CD85	LILRB7; CD85; LIR9; ILT11; CD85F
Homo sapiens	RefSeq	NM_001005167.1	ILMN_27524	OR52E6	NM_001005167.1	NM_001005167.1		390078	52353255	NM_001005167.1	OR52E6	NP_001005167.1	ILMN_1784834	0003520600	S	846	GGTTGTTCCTCCCACCCTCAATCCTGTAATCTATGGGGTCAGAACCAAAC	11	-	5862232-5862281	11p15.4c	Homo sapiens olfactory receptor, family 52, subfamily E, member 6 (OR52E6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-58	OR11-58
Homo sapiens	RefSeq	NM_178356.1	ILMN_174192	LOC730862	XM_001127514.1	XM_001127514.1		730862	113412361	XM_001127514.1	LOC730862	XP_001127514.1	ILMN_1806683	0005340253	S	296	CCCAAGTGTCCTATCCCCAAGTATCCCCCAAAATGTCCCTCAAAGTGTGC					PREDICTED: Homo sapiens hypothetical protein LOC730862 (LOC730862), mRNA.					SPRL4A; LEP8
Homo sapiens	RefSeq	XM_942271.1	ILMN_43838	WHDC1L2	XM_942271.1	XM_942271.1		440253	89076921	XM_942271.1	WHDC1L2	XP_947364.1	ILMN_1653846	0007100279	A	30	GCAGTTGCCTCAACTAGGAATGCAAAAAGAAATGGAACAGGATGTGAAGA				15q13.1b	PREDICTED: Homo sapiens WAS protein homology region 2 domain containing 1-like 2, transcript variant 3 (WHDC1L2), mRNA.					
Homo sapiens	RefSeq	NM_024578.1	ILMN_17644	OCEL1	NM_024578.1	NM_024578.1		79629	13375755	NM_024578.1	OCEL1	NP_078854.1	ILMN_1757388	0003460253	S	913	TGCAAATGCCTCTTCAGTTTGGACTCAGCTCTGACAGCCCCTCCTCCAGG	19	+	17200850-17200899	19p13.11e	Homo sapiens occludin/ELL domain containing 1 (OCEL1), mRNA.				S863-9; FLJ22709; FWP009	S863-9; FLJ22709; FWP009
Homo sapiens	RefSeq	NM_012110.2	ILMN_24345	CHIC2	NM_012110.2	NM_012110.2		26511	29337284	NM_012110.2	CHIC2	NP_036242.1	ILMN_1679428	0003130576	S	845	CCAAGTATGTTGTCTTTCCAATGGTGCCTTGCTTGGTGCTCTCCTGGTGG	4	-	54876186-54876235	4q12b	Homo sapiens cysteine-rich hydrophobic domain 2 (CHIC2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BTL; MGC21173	BTL; MGC21173
Homo sapiens	RefSeq	NM_181846.1	ILMN_29227	ZSCAN22	NM_181846.1	NM_181846.1		342945	32813444	NM_181846.1	ZSCAN22	NP_862829.1	ILMN_1704765	0002650717	S	4396	GGGGAGGAGATGAGGGAGAAAAAAGGGAATCTACTCAGAGCCTGTGTGTG	19	+	63545277-63545326	19q13.43c	Homo sapiens zinc finger and SCAN domain containing 22 (ZSCAN22), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF50; MGC126679; MGC138482; HKR2	ZNF50; MGC126679; MGC138482; HKR2
Homo sapiens	RefSeq	NM_016381.2	ILMN_4779	TREX1	NM_016381.3	NM_016381.3		11277	148613867	NM_016381.3	TREX1	NP_057465.1	ILMN_1676997	0007550376	I	747	CCCTTCGGATCTTAACACTGGGCACTCACACACCCACCCCATGCTCCTCT	3	+	48482979-48483028	3p21.31e	Homo sapiens three prime repair exonuclease 1 (TREX1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 10391904] [evidence NAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 11278605] [evidence NAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 10391904] [evidence NAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 11278605] [evidence NAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 10391904] [evidence NAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 11278605] [evidence NAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 10391904] [evidence NAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 10391904] [evidence TAS]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a DNA molecule [goid 8296] [pmid 10393201] [evidence TAS]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [pmid 16713580] [evidence IDA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [pmid 16713580] [evidence IDA]; Interacting selectively with an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety [goid 32558] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10391904] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11278605] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	HERNS; CHBL; DRN3; AGS5; DKFZp434J0310; CREN; CRV; AGS1	ATRIP; DRN3; FLJ12343; DKFZp434J0310; AGS1
Homo sapiens	RefSeq	XM_930378.1	ILMN_161914	LOC134466	XR_015967.1	XR_015967.1		134466	113416805	XR_015967.1	LOC134466		ILMN_1692200	0004860520	A	401	CTATGCTCAGAGGACCCTGTACAGGGATGTGATGCTGGAGATCTATAGCC	5	-	150302319-150302368	5q33.1d	PREDICTED: Homo sapiens hypothetical protein LOC134466 (LOC134466), misc RNA.					
Homo sapiens	RefSeq	NM_003524.2	ILMN_27829	HIST1H2BH	NM_003524.2	NM_003524.2		8345	21166386	NM_003524.2	HIST1H2BH	NP_003515.1	ILMN_1688666	0001690392	S	352	GCCGTCACCAAGTACACCAGCTCCAAATAAATGGACGCATGTTCAAACCC	6	+	26252230-26252259:26252260-26252279	6p22.1d	Homo sapiens histone cluster 1, H2bh (HIST1H2BH), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [pmid 9119399] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 9119399] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9119399] [evidence NAS]	H2B/j; H2BFJ	H2B/j; H2BFJ
Homo sapiens	RefSeq	XM_001720644.1	ILMN_342347	LOC729948	XM_001720644.1	XM_001720644.1		729948	169171429	XM_001720644.1	LOC729948	XP_001720696.1	ILMN_3224815	0002940592	A	1	ATCTGGCTTCCCGGGGAAGGGGCTAGGTCGGCTTGAAAAGAGATTATGAC				7q32.1a	PREDICTED: Homo sapiens similar to CDC26 subunit of anaphase promoting complex (LOC729948), mRNA.					
Homo sapiens	RefSeq	XM_926037.1	ILMN_183966	LOC727942	XM_001126195.1	XM_001126195.1		727942	113411840	XM_001126195.1	LOC727942	XP_001126195.1	ILMN_1745473	0006560114	S	971	CATATCAATCCCTAAATTGAATGGTGGGAGGTTGCAAAGTGTATTTGCAC	1	-	139700-139749		PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein isoform 2 (LOC727942), mRNA.					
Homo sapiens	Unigene	Hs.542071	ILMN_106094	HS.542071	Hs.542071		Hs.542071		3075722	AA926825			ILMN_1821541	0006650289	S	118	CCAGCAGGTTGGGGCTTCAGAAAGTAGGAGGGCTTTGTGTCTGGCCGACT	2	-	43164482-43164531		oi54f08.s1 NCI_CGAP_HN3 Homo sapiens cDNA clone IMAGE:1486503 3, mRNA sequence					
Homo sapiens	RefSeq	XM_942336.1	ILMN_164264	LOC441811	XR_018108.1	XR_018108.1		441811	113427893	XR_018108.1	LOC441811		ILMN_1681049	0004560491	S	2594	TCCTGTATCTGCCAGAGGAAGACACCTTCTGGGCACTGGATCAGCTGATG				18p11.21a	PREDICTED: Homo sapiens similar to TBC1 domain family, member 3 (LOC441811), mRNA.					
Homo sapiens	RefSeq	NM_024795.1	ILMN_26019	TM4SF20	NM_024795.2	NM_024795.2		79853	142364190	NM_024795.2	TM4SF20	NP_079071.1	ILMN_1775830	0001450687	S	1869	GACTGCAACTCATCACATGAGGTCAGGTATGGAATTTTCCACTTGTGGTG	2	-	227935491-227935540	2q36.3c	Homo sapiens transmembrane 4 L six family member 20 (TM4SF20), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TCCE518; PRO994; FLJ22800	TCCE518; PRO994; FLJ22800
Homo sapiens	RefSeq	NM_014294.3	ILMN_3604	TRAM1	NM_014294.4	NM_014294.4		23471	142382439	NM_014294.4	TRAM1	NP_055109.1	ILMN_1737146	0000110167	S	2508	GTTCACATCTTGTTCCCCATTTCTCACTTGTGTCACCAGCTGTTTGTGCC	8	-	71648458-71648507	8q13.3b	Homo sapiens translocation associated membrane protein 1 (TRAM1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 1315422] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1315422] [evidence TAS]	The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria [goid 6613] [pmid 1315422] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1315422] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18555783] [evidence IPI]	PNAS-8; TRAMP; TRAM	TRAMP; TRAM
Homo sapiens	Unigene	Hs.276795	ILMN_84301	HS.276795	Hs.276795		Hs.276795		22213079	BC025734			ILMN_1840273	0003930519	S	2073	CCATGGGATCAGAGGATTGAAATGTCAAGGAACCTCCCTTGATGTCCCCC	4	+	4763238-4763287		Homo sapiens, clone IMAGE:5204729, mRNA					
Homo sapiens	RefSeq	NM_006143.1	ILMN_20675	GPR19	NM_006143.1	NM_006143.1		2842	5453665	NM_006143.1	GPR19	NP_006134.1	ILMN_2102201	0001710634	S	1074	AATGTTACCGAAGCAATGCCTATACTATCACAACAAGTTCAAGGATGGCC	12	-	12705548-12705597	12p13.1b	Homo sapiens G protein-coupled receptor 19 (GPR19), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8830667] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8830667] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	NM_006143.1	ILMN_20675	GPR19	NM_006143.1	NM_006143.1		2842	5453665	NM_006143.1	GPR19	NP_006134.1	ILMN_1805973	0006200072	S	880	GCTCTCCTGGCTGCCTTTTCATGTAGCTCAGCTATGGCACCCCCATGAAC	12	-	12705742-12705791	12p13.1b	Homo sapiens G protein-coupled receptor 19 (GPR19), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8830667] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8830667] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	XM_001721786.1	ILMN_341742	LOC100134091	XM_001721786.1	XM_001721786.1		100134091	169217664	XM_001721786.1	LOC100134091	XP_001721838.1	ILMN_3283869	0006900333	M	48	GGGGAAAATGGCTTTGTTGGCCTCAGATAGCTGCTTTATTAGATGTAATG					PREDICTED: Homo sapiens hypothetical protein LOC100134091, transcript variant 2 (LOC100134091), mRNA.					
Homo sapiens	RefSeq	NR_030336.1	ILMN_388070	MIR605	NR_030336.1	NR_030336.1		693190	262206023	NR_030336.1	MIR605		ILMN_3310136	0000110170	S	7	CTTGGTTCTAAATCCCATGGTGCCTTCTCCTTGGGAAAAACAGAGAAGGC				10q11.23c	Homo sapiens microRNA 605 (MIR605), microRNA.					
Homo sapiens	Unigene	Hs.463489	ILMN_94509	HS.463489	Hs.463489		Hs.463489		24659733	BC039321			ILMN_1855355	0003870278	S	1459	AGGTATAAGGAAAAGGTGAGGGCCACGAGAACCGGCAATGGGACGCTGGC	1	-	9180021-9180070		Homo sapiens cDNA clone IMAGE:5266832					
Homo sapiens	RefSeq	NM_153369.1	ILMN_19440	KIAA1919	NM_153369.1	NM_153369.1		91749	24158475	NM_153369.1	KIAA1919	NP_699200.1	ILMN_1691916	0002230670	S	1833	GCAGTGCCCATGTGAAGCACTTGCCAGAAACCAGGACAAAAGGGACTAAC	6	+	111694960-111695009	6q21h	Homo sapiens KIAA1919 (KIAA1919), mRNA.				NaGLT1; MGC33953	NaGLT1; MGC33953
Homo sapiens	RefSeq	NM_002137.3	ILMN_26447	HNRNPA2B1	NM_002137.3	NM_002137.3		3181	156151373	NM_002137.3	HNRNPA2B1	NP_002128.1	ILMN_3273854	0001570722	M	2987	GCCCGGCTTTATTGCCTTTACAGGAATGTGATACTCAGGGCTTACTCTAT	7	-	26230185-26230234	7p15.2b	Homo sapiens heterogeneous nuclear ribonucleoprotein A2/B1 (HNRNPA2B1), transcript variant A2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9731529] [evidence IDA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 2557628] [evidence IDA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 9731529] [evidence IC ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of RNA, ribonucleic acids, into, out of, within or between cells [goid 50658] [pmid 17004321] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 15659580] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15703215] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16294306] [evidence IPI]; Interacting selectively with single-stranded telomere-associated DNA [goid 43047] [pmid 15659580] [evidence IDA]	HNRNPA2; HNRPB1; FLJ22720; SNRPB1; RNPA2; HNRNPB1; HNRPA2B1; HNRPA2; DKFZp779B0244	HNRNPA2; HNRPB1; FLJ22720; SNRPB1; RNPA2; HNRNPB1; HNRPA2B1; HNRPA2; DKFZp779B0244
Homo sapiens	RefSeq	NM_030664.3	ILMN_22465	PTER	NM_030664.3	NM_030664.3		9317	47933342	NM_030664.3	PTER	NP_109589.2	ILMN_1795336	0006130382	A	3563	CCTCAGGCCACAGACTTGTAGTAATCATTTGAAGGCCTCACCTAGTGTCC	10	+	16555402-16555451	10p13a	Homo sapiens phosphotriesterase related (PTER), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism [goid 9056] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism [goid 9056] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	RPR-1	RPR-1
Homo sapiens	RefSeq	NM_030664.3	ILMN_22465	PTER	NM_030664.3	NM_030664.3		9317	47933342	NM_030664.3	PTER	NP_109589.2	ILMN_2392624	0000110674	A	3650	GTGCATTGGGTTATGAATAATCTTTTCTTCCAAAGATGGCAAAAGCCTCG	10	+	16555489-16555538	10p13a	Homo sapiens phosphotriesterase related (PTER), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism [goid 9056] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism [goid 9056] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	RPR-1	RPR-1
Homo sapiens	RefSeq	NM_178122.2	ILMN_5581	C1ORF201	NM_178122.2	NM_178122.2		90529	31342415	NM_178122.2	C1orf201	NP_835223.1	ILMN_2187071	0004540537	S	2012	AAATGCTGATTTAACTCCTCCAGGGTGGGGTCTGGGCAGTGGGGAGGCAG	1	-	24556515-24556564	1p36.11d	Homo sapiens chromosome 1 open reading frame 201 (C1orf201), mRNA.				FLJ33340	FLJ33340
Homo sapiens	RefSeq	XM_931316.1	ILMN_44798	LOC643100	XM_931316.1	XM_931316.1		643100	88976408	XM_931316.1	LOC643100	XP_936409.1	ILMN_1692045	0003840382	S	186	GAAGTTTCCTTCCCTGTGTGGTTTCTTCCCGGTTCCTCTGGCAGCCCTCC	4	-	76325162-76325211	4q13.3e	PREDICTED: Homo sapiens hypothetical protein LOC643100 (LOC643100), mRNA.					
Homo sapiens	RefSeq	NM_001012413.1	ILMN_14008	SGOL1	NM_138484.2	NM_138484.2		151648	142359926	NM_138484.2	SGOL1	NP_612493.1	ILMN_1730825	0004610348	A	612	GAAGCTACACCACCTGAAACTCAGCAGTCACCTCATCTTAGCCTGAAGGA	3	-	20212678-20212724:20218093-20218095	3p24.3b	Homo sapiens shugoshin-like 1 (S. pombe) (SGOL1), transcript variant C2, mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex [goid 30892] [pmid 18084284] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle [goid 45132] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16541025] [evidence IPI]	NY-BR-85; Sgo1	NY-BR-85; Sgo1
Homo sapiens	RefSeq	XM_936229.1	ILMN_37276	LOC653882	XM_936229.1	XM_936229.1		653882	88979854	XM_936229.1	LOC653882	XP_941322.1	ILMN_1689861	0003890386	S	569	CAGCAAATGTCACAACAACCTTGGAAGTAGTAGGTAAATACCTCTATGGG					PREDICTED: Homo sapiens similar to v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (LOC653882), mRNA.					
Homo sapiens	RefSeq	NM_058248.1	ILMN_27910	DNASE2B	NM_058248.1	NM_058248.1		58511	17402881	NM_058248.1	DNASE2B	NP_490649.1	ILMN_2275742	0003870154	I	1	ATTGCAGGCTGGGTAGCTGGTAGAAATGTTGTGGGCGTTTGTAAGTGGAA	1	+	84646622-84646671	1p31.1a	Homo sapiens deoxyribonuclease II beta (DNASE2B), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks [goid 4520] [evidence IEA]; Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products [goid 4531] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DLAD	DLAD
Homo sapiens	RefSeq	NM_023007.1	ILMN_24876	JMJD4	NM_023007.1	NM_023007.1		65094	12711669	NM_023007.1	JMJD4	NP_075383.1	ILMN_1692896	0004210300	S	2297	CCCAGCCCTGTCCTTGACCGAGAGTCCAGCATTTTTTCAGTTGGCCCCTG	1	-	225985761-225985810	1q42.13b	Homo sapiens jumonji domain containing 4 (JMJD4), mRNA.				FLJ12517; MGC129896	FLJ12517; MGC129896
Homo sapiens	RefSeq	NM_014912.3	ILMN_11977	CPEB3	NM_014912.3	NM_014912.3		22849	50345880	NM_014912.3	CPEB3	NP_055727.3	ILMN_1755954	0003610386	S	5081	CACAGAGGTGTTCTGACCTGCAACTTGACTGGGAAGCCCCTGGGTAACAC	10	-	93811150-93811199	10q23.32b	Homo sapiens cytoplasmic polyadenylation element binding protein 3 (CPEB3), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	XM_928572.1	ILMN_174046	LOC653355	XM_001128059.1	XM_001128059.1		653355	113420984	XM_001128059.1	LOC653355	XP_001128059.1	ILMN_1786628	0003780592	I	642	ACCACATTCCGAAGCAGATTATACACTGGGGCCACTGCTCTGCCGCGGAG	9	+	119991-120040		PREDICTED: Homo sapiens similar to Contactin-associated protein-like 3 precursor (Cell recognition molecule Caspr3) (LOC653355), mRNA.					
Homo sapiens	RefSeq	XM_938232.1	ILMN_33195	LOC649162	XM_938232.1	XM_938232.1		649162	89037136	XM_938232.1	LOC649162	XP_943325.1	ILMN_1763960	0000540537	S	121	CTGCAACTCCGCCAGATGTACCGCACTCAGTTTCCTCTGTGCTCCCCTGA					PREDICTED: Homo sapiens hypothetical protein LOC649162 (LOC649162), mRNA.					
Homo sapiens	Unigene	Hs.547239	ILMN_109477	HS.547239	Hs.547239		Hs.547239		14340547	BG941175			ILMN_1827083	0003360037	S	45	GGTCCACCAGTTCAGCAGCCTGTCCTCTCAGCTTCTTCTAGGGTGGCTTA	1	-	61291874-61291923		ax09g05.x2 Proliferating Human Erythroid Cells (LCB:ax library) Homo sapiens cDNA clone ax09g05 random, mRNA sequence					
Homo sapiens	RefSeq	NM_003251.2	ILMN_20354	THRSP	NM_003251.2	NM_003251.2		7069	42764629	NM_003251.2	THRSP	NP_003242.1	ILMN_1794844	0006480189	S	1014	GCTCTGGCCCTTGCTTTTTACCCTCCAGAGCTAAGAGGTAGCAGAGTCTC	11	+	77456885-77456934	11q14.1a	Homo sapiens thyroid hormone responsive (SPOT14 homolog, rat) (THRSP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9003802] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18299245] [evidence IPI]	MGC21659; S14; SPOT14	MGC21659; S14; SPOT14
Homo sapiens	RefSeq	NM_001004059.1	ILMN_18575	OR4S2	NM_001004059.2	NM_001004059.2		219431	116517324	NM_001004059.2	OR4S2	NP_001004059.2	ILMN_1727352	0003850338	S	707	CCACCTGTGGCTCCCACATTGCCATGGTCGTTATCTTTTTCGGCCCCTGT	11	+	55175662-55175711	11q11b	Homo sapiens olfactory receptor, family 4, subfamily S, member 2 (OR4S2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-137; OST725; OR4S2P	OR11-137; OST725; OR4S2P
Homo sapiens	RefSeq	NM_014020.2	ILMN_16603	TMEM176B	NM_014020.2	NM_014020.2		28959	21361500	NM_014020.2	TMEM176B	NP_054739.2	ILMN_2085012	0006620681	S	998	CCCAGCCCCTGAATGAGGAAGGATCAGAGAAGAGGCTACTGGGGGAGAAT	7	-	150119605-150119644:150120077-150120086	7q36.1c	Homo sapiens transmembrane protein 176B (TMEM176B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9922225] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		LR8; FLJ26014; MGC110857	LR8; FLJ26014; MGC110857
Homo sapiens	RefSeq	NM_015245.1	ILMN_25376	ANKS1A	NM_015245.2	NM_015245.2		23294	140161499	NM_015245.2	ANKS1A	NP_056060.2	ILMN_1813669	0005390064	S	6002	GCCCAGGCCAGCAGAAAGCAGCTCAGAAGTATTGTTGCTCATGGTGTGGC	6	+	35058264-35058313	6p21.31d	Homo sapiens ankyrin repeat and sterile alpha motif domain containing 1A (ANKS1A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	ANKS1; KIAA0229; MGC42354	ANKS1; KIAA0229
Homo sapiens	RefSeq	XM_944925.1	ILMN_44329	LOC649242	XM_944925.1	XM_944925.1		649242	88989994	XM_944925.1	LOC649242	XP_950018.1	ILMN_1728371	0004900524	I	1334	GTCTATGAAAATGAAGAGGGCAGAGGGGTCATGGACCTTGCCTGTCACAC					PREDICTED: Homo sapiens hypothetical protein LOC649241, transcript variant 1 (LOC649242), mRNA.					
Homo sapiens	RefSeq	XM_001726664.1	ILMN_345168	LOC100134676	XM_001726664.1	XM_001726664.1		100134676	169170671	XM_001726664.1	LOC100134676	XP_001726716.1	ILMN_3243801	0002350343	S	261	TGCCCATGGTGTAGCCGCCAAGCGGAGGCATGGCTGCCGGAAGGTTACTG	7	+	140112414-140112442:140112443-140112463		PREDICTED: Homo sapiens hypothetical protein LOC100134676 (LOC100134676), mRNA.					
Homo sapiens	RefSeq	XM_932171.1	ILMN_41361	LOC644404	XM_932171.1	XM_932171.1		644404	88943010	XM_932171.1	LOC644404	XP_937264.1	ILMN_1715407	0006550717	S	1471	AAGGACATCTACCCACTTTTATGTCAATATCATGGGCTTTCTGGTGGAGG	1	+	141634933-141634982		PREDICTED: Homo sapiens hypothetical protein LOC644404 (LOC644404), mRNA.					
Homo sapiens	RefSeq	NM_024661.2	ILMN_10039	CCDC51	NM_024661.3	NM_024661.3		79714	94536783	NM_024661.3	CCDC51	NP_078937.3	ILMN_1799579	0004290259	S	1238	TGTGCTCTACATGCTATTCAAAGCCAGCTAACCCCTGGCCCCTCCTCCAG	3	-	48473798-48473817:48473818-48473847	3p21.31e	Homo sapiens coiled-coil domain containing 51 (CCDC51), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ12436	FLJ12436
Homo sapiens	RefSeq	NM_004345.3	ILMN_19677	CAMP	NM_004345.3	NM_004345.3		820	39753969	NM_004345.3	CAMP	NP_004336.2	ILMN_1688580	0005860075	S	644	AGAGTCCTAGTGTGTGCCCTACCCTGGCTCAGGCTTCTGGGCTCTGAGAA	3	+	48241909-48241918:48241919-48241958	3p21.31f	Homo sapiens cathelicidin antimicrobial peptide (CAMP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 8681941] [evidence TAS]		LL37; FALL39; CAP18; HSD26; FALL-39	LL37; FALL39; CAP18; HSD26; FALL-39
Homo sapiens	RefSeq	XR_040704.1	ILMN_343404	LOC401233	XR_040704.1	XR_040704.1		401233	169168519	XR_040704.1	LOC401233		ILMN_3307276	0000450102	A	2092	TGTGTTAGCCAGGGTGGTCTCGATCCGCCACCTCAGCCTCCCAGACACTT				6p25.2b	PREDICTED: Homo sapiens similar to HIV TAT specific factor 1; cofactor required for Tat activation of HIV-1 transcription (LOC401233), miscRNA.					
Homo sapiens	RefSeq	XM_928239.1	ILMN_44843	FLJ33651	XM_928239.1	XM_928239.1		285322	88961632	XM_928239.1	FLJ33651	XP_933332.1	ILMN_1746472	0003420131	S	1626	GCAGAGTGTCTTTGTGCATATCGAGCACCTAACATTGTTATACCGAGAAC	3	-	28590725-28590774	3p24.1c	PREDICTED: Homo sapiens hypothetical protein FLJ33651 (FLJ33651), mRNA.					
Homo sapiens	RefSeq	XM_939005.1	ILMN_36438	LOC649926	XM_939005.1	XM_939005.1		649926	89047300	XM_939005.1	LOC649926	XP_944098.1	ILMN_1742549	0000060471	S	172	CCCTTAAAAAAGACAAGATTAGGAACAACGGCTGGCAAGAGAGGAGGGGA					PREDICTED: Homo sapiens hypothetical protein LOC649926 (LOC649926), mRNA.					
Homo sapiens	Unigene	Hs.537828	ILMN_103531	HS.537828	Hs.537828		Hs.537828		24728739	CA394309			ILMN_1850842	0002360523	S	57	GAATACTTCTGTTGGCAGAGGAGTCATAGGCCCCAGTATGGTGTTTGGCA	1	+	161235756-161235805		cs50a08.y1 Human Retinal pigment epithelium/choroid cDNA (Un-normalized, unamplified): cs Homo sapiens cDNA clone cs50a08 5, mRNA sequence					
Homo sapiens	RefSeq	NR_029608.1	ILMN_388181	MIR10A	NR_029608.1	NR_029608.1		406902	262206211	NR_029608.1	MIR10A		ILMN_3309064	0007380189	S	57	GGTCACAAATTCGTATCTAGGGGAATATGTAGTTGACATAAACACTCCGC				17q21.32c	Homo sapiens microRNA 10a (MIR10A), microRNA.					
Homo sapiens	RefSeq	NM_003615.2	ILMN_163925	SLC4A7	NM_003615.3	NM_003615.3		9497	134288864	NM_003615.3	SLC4A7	NP_003606.3	ILMN_1808354	0000940035	S	6219	TCCAGAATGGAGCTTAGTGCTACTGAATACCCTGGCCACAGAGCCACCTC	3	-	27414767-27414816	3p24.1d	Homo sapiens solute carrier family 4, sodium bicarbonate cotransporter, member 7 (SLC4A7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10347222] [evidence NAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [pmid 10347222] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA];  [goid 5452] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + HCO3-(out) = Na+(in) + HCO3-(in) [goid 8510] [pmid 10347222] [evidence NAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SLC4A6; SBC2; DKFZp686H168; NBC2; NBC3	SLC4A6; SBC2; DKFZp686H168; NBC2; NBC3
Homo sapiens	RefSeq	XM_935704.1	ILMN_39306	LOC641944	XM_935704.1	XM_935704.1		641944	89027688	XM_935704.1	LOC641944	XP_940797.1	ILMN_1684714	0006550523	S	131	GAGGCCGCTGCCGCCGTGGTGGGGACCCGCGCCCCTCCGCGCACTTGAAG					PREDICTED: Homo sapiens hypothetical protein LOC641944 (LOC641944), mRNA.					
Homo sapiens	RefSeq	XR_040131.1	ILMN_343683	C21ORF89	XR_040131.1	XR_040131.1		114042	169215423	XR_040131.1	C21orf89		ILMN_3263072	0005490072	M	47	ACGTGCTAATGATTAACGCCCCGTCCGTGCTGGCCGGTTTCTCAAATGCC				21q22.3e	PREDICTED: Homo sapiens chromosome 21 open reading frame 89 (C21orf89), miscRNA.					
Homo sapiens	Unigene	Hs.573929	ILMN_126110	HS.573929	Hs.573929		Hs.573929		82861431	DR980360			ILMN_1913407	0002810537	S	317	ACACAAAAGGAGCTTCGACGGGAACGCCCTCGACTTCCCACTGCCAAACC					SM016146 Placenta 3 EST Homo sapiens cDNA clone ID_16146 3', mRNA sequence					
Homo sapiens	RefSeq	NM_003140.1	ILMN_176939	SRY	NM_003140.1	NM_003140.1		6736	4507224	NM_003140.1	SRY	NP_003131.1	ILMN_1748182	0007160259	S	654	CGAAAGCCACACACTCAAGAATGGAGCACCAGCTAGGCCACTTACCGCCC	Y	-	2715089-2715138	Yp11.31b	Homo sapiens sex determining region Y (SRY), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1425584] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8265659] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The specification of male sex of an individual organism [goid 30238] [pmid 1695712] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15527767] [evidence IPI]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence NAS]	TDY; TDF	TDY; TDF
Homo sapiens	RefSeq	XM_941605.1	ILMN_31586	LOC652222	XM_941605.1	XM_941605.1		652222	89062510	XM_941605.1	LOC652222	XP_946698.1	ILMN_1789294	0003190523	S	188	TCGGAGGGCTCCTGGGGAACTGCCTTGTCATGTACGTCATCCTCAGGTAG					PREDICTED: Homo sapiens similar to opiate receptor-like 1 (LOC652222), mRNA.					
Homo sapiens	Unigene	Hs.571403	ILMN_123584	HS.571403	Hs.571403		Hs.571403		81103566	DA453004			ILMN_1909191	0002060332	S	395	ACAGCGGCAGCATCCCAAAGCCCTAGCCTGGTCCATCACCCTCAAAACTG	8	-	125916411-125916460		DA453004 CTONG2 Homo sapiens cDNA clone CTONG2025812 5, mRNA sequence					
Homo sapiens	RefSeq	NM_153649.2	ILMN_166986	LOC650152	XR_018707.1	XR_018707.1		650152	113414293	XR_018707.1	LOC650152		ILMN_1660775	0005420136	I	2282	TGGCTTAAAATGTACTCTCCTTTTATGTGGTCTCTTTGGGGCCGATTGGG					PREDICTED: Homo sapiens similar to tropomyosin 3 isoform 2 (LOC650152), mRNA.					TRK; NEM1; MGC72094
Homo sapiens	RefSeq	NM_016326.2	ILMN_162781	CKLF	NM_001040138.1	NM_001040138.1		51192	93141023	NM_001040138.1	CKLF	NP_001035228.1	ILMN_1712389	0005080367	A	180	ACATCGCCCCTTCTGCTTCAGTGTGAAAGGCCACGTGAAGATGCTGCGGC	16	+	65144146-65144195	16q21e	Homo sapiens chemokine-like factor (CKLF), transcript variant 5, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11415443] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11415443] [evidence IDA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11415443] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [pmid 11415443] [evidence IDA]; The regulated release of a substance by a cell [goid 32940] [pmid 11415443] [evidence IDA]; The movement of a macrophage in response to an external stimulus [goid 48246] [pmid 11415443] [evidence IDA]; The directed movement of a lymphocyte in response to an external stimulus [goid 48247] [pmid 11415443] [evidence IDA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 11415443] [evidence IDA]	UCK-1; CKLF1; CKLF4; CKLF2; CKLF3; C32; HSPC224	UCK-1; CKLF1; CKLF4; CKLF2; CKLF3; C32; HSPC224
Homo sapiens	RefSeq	NM_021153.2	ILMN_181280	CDH19	NM_021153.2	NM_021153.2		28513	16306535	NM_021153.2	CDH19	NP_066976.1	ILMN_2100731	0006110689	S	3037	CCATGGAAAATAGACGAGAAAATGTAAATAAGGCTTTCTGGGGATCACAG	18	-	64171419-64171468	18q22.1c-q22.1d	Homo sapiens cadherin 19, type 2 (CDH19), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDH7; CDH7L2	CDH7; CDH7L2
Homo sapiens	RefSeq	NM_001042550.1	ILMN_171723	SMC2	NM_001042550.1	NM_001042550.1		10592	110347419	NM_001042550.1	SMC2	NP_001036015.1	ILMN_2296422	0000510025	I	219	CCCGGAGTCAAGCACAATTCGGGGATGCAATGACGGACGTAGGTGAAGAC	9	+	105896870-105896919	9q31.1d	Homo sapiens structural maintenance of chromosomes 2 (SMC2), transcript variant 1, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 10958694] [evidence IDA]; A multisubunit protein complex that plays a central role in chromosome condensation [goid 796] [pmid 10958694] [evidence IDA]; A multisubunit protein complex that plays a central role in chromosome condensation [goid 796] [pmid 11136719] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12589063] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12589063] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10958694] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [pmid 11136719] [evidence NAS]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12589063] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9789013] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SMC2L1; hCAP-E; FLJ10093; CAPE; CAP-E	SMC2L1; hCAP-E; FLJ10093; CAPE; CAP-E
Homo sapiens	RefSeq	NM_006444.1	ILMN_171723	SMC2	NM_001042550.1	NM_001042550.1		10592	110347419	NM_001042550.1	SMC2	NP_001036015.1	ILMN_1748923	0002650494	S	3699	GCAGCCTTGGATCTTTCTCATACCCAAAACATTGGACAGATGCTGCGTAC	9	+	105940199-105940248	9q31.1d	Homo sapiens structural maintenance of chromosomes 2 (SMC2), transcript variant 1, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 10958694] [evidence IDA]; A multisubunit protein complex that plays a central role in chromosome condensation [goid 796] [pmid 10958694] [evidence IDA]; A multisubunit protein complex that plays a central role in chromosome condensation [goid 796] [pmid 11136719] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12589063] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12589063] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10958694] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [pmid 11136719] [evidence NAS]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12589063] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9789013] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SMC2L1; hCAP-E; FLJ10093; CAPE; CAP-E	hCAP-E; CAPE; CAP-E
Homo sapiens	RefSeq	NM_001042550.1	ILMN_171723	SMC2	NM_001042550.1	NM_001042550.1		10592	110347419	NM_001042550.1	SMC2	NP_001036015.1	ILMN_2411190	0003360400	A	5905	AGGAAACTTGCTCAGGGTGATAATACAGTTAGGAGTGTCAGGGCCCATGG	9	+	105943378-105943427	9q31.1d	Homo sapiens structural maintenance of chromosomes 2 (SMC2), transcript variant 1, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 10958694] [evidence IDA]; A multisubunit protein complex that plays a central role in chromosome condensation [goid 796] [pmid 10958694] [evidence IDA]; A multisubunit protein complex that plays a central role in chromosome condensation [goid 796] [pmid 11136719] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12589063] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12589063] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10958694] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [pmid 11136719] [evidence NAS]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12589063] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9789013] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SMC2L1; hCAP-E; FLJ10093; CAPE; CAP-E	SMC2L1; hCAP-E; FLJ10093; CAPE; CAP-E
Homo sapiens	RefSeq	XM_945617.1	ILMN_137476	SPG21	XM_945617.1	XM_945617.1		51324	89039034	XM_945617.1	SPG21	XP_950710.1	ILMN_1771089	0003780446	I	104	CTGGAACCCAAAGGTGTCCCTCCAAAGCTGTACACGACAGAGAAAACGCG				15q22.31b	PREDICTED: Homo sapiens spastic paraplegia 21 (autosomal recessive, Mast syndrome), transcript variant 10 (SPG21), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11113139] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [pmid 11113139] [evidence IDA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISS]	A series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell [goid 50851] [pmid 11113139] [evidence IC ]	Interacting selectively with a CD4, a receptor found on the surface of T cells, monocytes and macrophages [goid 42609] [evidence ISS]; Interacting selectively with a CD4, a receptor found on the surface of T cells, monocytes and macrophages [goid 42609] [pmid 11113139] [evidence IPI]		
Homo sapiens	RefSeq	NM_139265.2	ILMN_14021	EHD4	NM_139265.2	NM_139265.2		30844	34147619	NM_139265.2	EHD4	NP_644670.1	ILMN_1720083	0006400647	S	2642	TCAATCAAATCCTGTCCTAGTGTGTGCAGTGTCTTCGGCCCTGTGGACAC	15	-	39979119-39979168	15q15.1c-q15.1d	Homo sapiens EH-domain containing 4 (EHD4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10673336] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [pmid 10673336] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	PAST4	PAST4
Homo sapiens	RefSeq	NM_005891.1	ILMN_13138	ACAT2	NM_005891.1	NM_005891.1		39	5174388	NM_005891.1	ACAT2	NP_005882.1	ILMN_2133799	0006420056	S	1004	GCCTTTGCAGCTGTCTCTGCTGCAATAGTTAAAGAACTTGGATTAAACCC	6	+	160119248-160119297	6q25.3f	Homo sapiens acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) (ACAT2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7911016] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7911016] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: 2 acetyl-CoA = CoA + acetoacetyl-CoA [goid 3985] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_033198.2	ILMN_7735	PIGS	NM_033198.2	NM_033198.2		94005	23397651	NM_033198.2	PIGS	NP_149975.1	ILMN_1691291	0002030520	S	2159	TAGTTGGCTTTGTCTGTCAGGTGCAGTCTGGCGGGAGTCCAGGAGGCAGC	17	-	23904838-23904887	17q11.2a	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class S (PIGS), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor [goid 42765] [pmid 15713669] [evidence TAS]	A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [pmid 11483512] [evidence TAS]; A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [pmid 1846368] [evidence EXP]	Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor [goid 3923] [pmid 11483512] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11483512] [evidence IPI]	FLJ45226; DKFZp686K20216	FLJ45226; DKFZp686K20216
Homo sapiens	RefSeq	NM_016475.2	ILMN_2292	C14ORF100	NM_016475.2	NM_016475.2		51528	21361536	NM_016475.2	C14orf100	NP_057559.2	ILMN_1700276	0005700196	S	1220	ACACAGGGTAATATTATCTGCTACACTGGAAGGCCGCTAGGAAGCCCTCG	14	+	59040741-59040790	14q23.1b	Homo sapiens chromosome 14 open reading frame 100 (C14orf100), mRNA.				HSPC213; HSPC327	HSPC213; HSPC327
Homo sapiens	Unigene	Hs.359754	ILMN_87482	HS.359754	Hs.359754		Hs.359754		5234902	AI768393			ILMN_1903858	0001940717	S	105	GGGGGTCCACCATCTCAAGGTGTCCTCACTTGGCCTGTTTGGCCTTTGCA	4	-	84349091-84349100:84357595-84357634		wg84h06.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:2371835 3, mRNA sequence					
Homo sapiens	RefSeq	NM_181839.1	ILMN_19703	PKIA	NM_181839.1	NM_181839.1		5569	32483385	NM_181839.1	PKIA	NP_862822.1	ILMN_2337974	0000510435	A	1890	ACTGTGTTTGATGGCCTCTGCTGTGTTTTAACATCGTGCTTCTTATATGG	8	+	79515320-79515369	8q21.12a	Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor alpha (PKIA), transcript variant 7, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [pmid 1710219] [evidence TAS]	PRKACN1	PRKACN1
Homo sapiens	Unigene	Hs.560266	ILMN_114133	HS.560266	Hs.560266		Hs.560266		4738164	AI654185			ILMN_1905577	0002680465	S	402	GTGCTTGCTGTAGATGTGAGTAGTAACTGGAGGGAGAAAAAGGGCCTGTG					ty62g10.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2283714 3, mRNA sequence					
Homo sapiens	RefSeq	XR_039173.1	ILMN_350828	LOC100130293	XR_039173.1	XR_039173.1		100130293	169218301	XR_039173.1	LOC100130293		ILMN_3248018	0006220280	S	71	AACTTCTGGTATATCATTGACACCGAGCGGCTGGAGAGGACTGGCCCGGG					PREDICTED: Homo sapiens misc_RNA (LOC100130293), partial miscRNA.					
Homo sapiens	Unigene	Hs.563969	ILMN_116721	HS.563969	Hs.563969		Hs.563969		19706363	BM986974			ILMN_1857247	0006330288	S	245	AGGAAACAGAGGCTAAGAGTGCAGGAGGGTGTTGCCCACGTTCATTGCCC	1	+	14924702-14924751		UI-H-CO0-aqe-f-11-0-UI.s1 NCI_CGAP_Sub9 Homo sapiens cDNA clone IMAGE: 3103987 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022491.2	ILMN_161880	SUDS3	NM_022491.2	NM_022491.2		64426	75677350	NM_022491.2	SUDS3	NP_071936.2	ILMN_1757754	0006350594	S	4473	GGTTTTTGATCCATTGCTTATGGGGAAAGGAAGTTAGGGCAGAGGAAGGG	12	+	117339968-117340017	12q24.23a	Homo sapiens suppressor of defective silencing 3 homolog (S. cerevisiae) (SUDS3), mRNA.	A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins [goid 16580] [pmid 11909966] [evidence ISS]; A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins [goid 16580] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11909966] [evidence ISS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 11909966] [evidence ISS]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence IEA]	SAP45; SDS3; MGC104711; FLJ00052	SAP45; SDS3; MGC104711; FLJ00052
Homo sapiens	RefSeq	NM_001851.3	ILMN_167559	COL9A1	NM_001851.3	NM_001851.3		1297	73486665	NM_001851.3	COL9A1	NP_001842.3	ILMN_2284647	0001340671	I	892	GAGAAACTTGCCATGAGCTGCCAGCCAGAATAACGCCCAGCCAGACCACC	6	-	71049327-71049342:71050161-71050194	6q13a	Homo sapiens collagen, type IX, alpha 1 (COL9A1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils [goid 5594] [pmid 9707347] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 3473493] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ40263; MED; DJ149L1.1.2	DJ149L1.1.2; FLJ40263; MED
Homo sapiens	RefSeq	NM_001851.3	ILMN_167559	COL9A1	NM_001851.3	NM_001851.3		1297	73486665	NM_001851.3	COL9A1	NP_001842.3	ILMN_2390099	0005340402	A	2644	CTAAAGGTGACTTGGGAGAAAAGGGGGAGCGTGGCCCTCCAGGAAGAGGT	6	-	70992389-70992433:70999007-70999011	6q13a	Homo sapiens collagen, type IX, alpha 1 (COL9A1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils [goid 5594] [pmid 9707347] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 3473493] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ40263; MED; DJ149L1.1.2	DJ149L1.1.2; FLJ40263; MED
Homo sapiens	RefSeq	NM_002439.2	ILMN_24233	MSH3	NM_002439.2	NM_002439.2		4437	68303634	NM_002439.2	MSH3	NP_002430.2	ILMN_1719471	0000150465	S	3376	GGATCCAGGCGCAGCAGAACAAGTCCCTGATTTTGTCACCTTCCTTTACC	5	+	80024746-80024784:80037283-80037293	5q14.1e	Homo sapiens mutS homolog 3 (E. coli) (MSH3), mRNA.	A heterodimer involved in binding to and correcting insertion/deletion mutations. In human the complex consists of two subunits, MSH2 and MSH3 [goid 32302] [pmid 8942985] [evidence IDA]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 8942985] [evidence IDA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 11005803] [evidence IDA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 8782829] [evidence IMP]; The process by which immunoglobulin genes are formed through recombination of the germline genetic elements, as known as immunoglobulin gene segments, within a single locus [goid 16447] [evidence IEA]; Any process involved in sustaining the fidelity and copy number of DNA repeat elements [goid 43570] [pmid 16388310] [evidence IMP]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the removal of purines present in mismatches, especially opposite oxidized purines, by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic (AP) site [goid 701] [pmid 11005803] [evidence IMP]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 11809883] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14657349] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11427529] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [pmid 8942985] [evidence IDA]; Interacting selectively with double-stranded DNA containing a G/T mispair [goid 32137] [pmid 11809883] [evidence IDA]; Interacting selectively with double-stranded DNA containing a single guanine insertion or a deletion that results in an unpaired guanine [goid 32142] [pmid 8942985] [evidence IDA]; Interacting selectively with double-stranded DNA containing a dinucleotide repeat insertion or a deletion resulting in unpaired dinucleotide repeats [goid 32181] [pmid 8942985] [evidence IDA]; Interacting selectively with oxidized purine residues in DNA [goid 32357] [pmid 11756455] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8942985] [evidence IDA]	MGC163308; MGC163306; DUP; MRP1	MGC163308; MGC163306; DUP; MRP1
Homo sapiens	Unigene	Hs.565552	ILMN_118013	HS.565552	Hs.565552		Hs.565552		6504823	AW205351			ILMN_1837344	0007160072	S	44	GGTGGGGTTCTGTGTTGCCCAGACTAAACTCAAACTCGCTCCTGGGGCCC					UI-H-BI1-aew-c-10-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2720658 3, mRNA sequence					
Homo sapiens	Unigene	Hs.543250	ILMN_106886	HS.543250	Hs.543250		Hs.543250		7154396	AW516314			ILMN_1909073	0004280059	S	348	TCCTTGGGTCATCTCAGGGAGTGGATGGGTCAGCCAAGTCTGGGGAATCC	3	+	15555601-15555650		xt64f10.x1 NCI_CGAP_Ut2 Homo sapiens cDNA clone IMAGE:2791243 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005805.2	ILMN_5019	PSMD14	NM_005805.3	NM_005805.3		10213	141802356	NM_005805.3	PSMD14	NP_005796.1	ILMN_1737396	0002600025	S	1108	GACACCTGAACAGCTGGCAATAAAGAATGTTGGCAAGCAGGACCCCAAAC	2	+	161973617-161973656:161976059-161976068	2q24.2c	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 (PSMD14), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 9374539] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9374539] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	rpn11; PAD1; POH1	rpn11; PAD1; POH1
Homo sapiens	RefSeq	NM_203283.1	ILMN_2077	RBPJ	NM_203283.1	NM_203283.1		3516	42560224	NM_203283.1	RBPJ	NP_976028.1	ILMN_2316844	0000270594	A	2113	CCCACCTTTGAGCTTTTGCTCTAAAATACATTCAGGTTCCAAGCCTGACC	4	+	26042217-26042266	4p15.2b	Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9874765] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9874765] [evidence IDA]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The extension of new blood vessels from existing capillaries into avascular tissues resulting from the proliferation of blood vessel endothelial cells [goid 2040] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 8406481] [evidence NAS]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Generation of cells within the nervous system [goid 22008] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 10713164] [evidence IDA]	Catalysis of the identification and base-pairing of homologous sequences between single-stranded DNA and double-stranded DNA [goid 150] [pmid 8406481] [evidence NAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9874765] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10713164] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9874765] [evidence IPI]	SUH; KBF2; RBP-J; IGKJRB1; IGKJRB; RBPJK; CBF1; RBPSUH; csl; MGC61669	SUH; RBP-J; RBPJK; csl; KBF2; IGKJRB1; IGKJRB; CBF1; RBPSUH; MGC61669
Homo sapiens	RefSeq	NM_002786.2	ILMN_2036	PSMA1	NM_002786.2	NM_002786.2		5682	23110933	NM_002786.2	PSMA1	NP_002777.1	ILMN_1691809	0003370543	I	37	TACTTTCGGCAGCACCTCCTTGATTCTCAGTTTTGCTGGAGGCCGCAACC	11	-	14498438-14498487	11p15.2b	Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7681138] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; Several ribosomes bound to one mRNA [goid 5844] [pmid 7681138] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7681138] [evidence TAS]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15225636] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC22853; MGC14751; PROS30; HC2; MGC1667; MGC21459; MGC14542; MGC23915; NU; MGC14575	MGC22853; MGC14751; PROS30; HC2; MGC1667; MGC21459; MGC14542; MGC23915; NU; MGC14575
Homo sapiens	RefSeq	NM_207390.1	ILMN_1099	CLEC17A	NM_207390.2	NM_207390.2		388512	118600968	NM_207390.2	CLEC17A	NP_997273.2	ILMN_1763398	0001110020	S	1334	CTGATCATGACTCTTGGGAAGTGATACTAGCCCTGAGGACCCTGGGGCTG	19	+	14582289-14582338	19p13.12c-p13.12b	Homo sapiens C-type lectin domain family 17, member A (CLEC17A), mRNA.					
Homo sapiens	RefSeq	XM_001720485.1	ILMN_351437	LOC730183	XM_001720485.1	XM_001720485.1		730183	169210220	XM_001720485.1	LOC730183	XP_001720537.1	ILMN_3306028	0006350181	M	392	TCCCGATTCCCATGGCAGCCCACTTCTGTAGCGCTGCTTCGTTTTACGCG				16p11.2c	PREDICTED: Homo sapiens hypothetical LOC730183 (LOC730183), mRNA.					
Homo sapiens	RefSeq	NM_001032221.1	ILMN_10266	STXBP1	NM_001032221.1	NM_001032221.1		6812	73760414	NM_001032221.1	STXBP1	NP_001027392.1	ILMN_2414878	0006100112	A	2878	CGTTGGACTCACACAGACCCTGTACCCTCTCGGCAAGCATCTTCAGTCAG	9	+	129493936-129493985	9q34.11a	Homo sapiens syntaxin binding protein 1 (STXBP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		rbSec1; MUNC18-1; UNC18; hUNC18	rbSec1; MUNC18-1; UNC18; hUNC18
Homo sapiens	RefSeq	XM_932601.1	ILMN_42156	LOC339047	XM_932601.1	XM_932601.1		339047	89039926	XM_932601.1	LOC339047	XP_937694.1	ILMN_1765031	0001240382	I	100	TTTCAGGCCCATGGCAGAGGGTGGGCTCAGGAGGGCCATCGTGGGTGTCC	16	+	16329907-16329956	16p13.11b	PREDICTED: Homo sapiens hypothetical protein LOC339047, transcript variant 74 (LOC339047), mRNA.					
Homo sapiens	RefSeq	NM_080863.4	ILMN_21148	ASB16	NM_080863.4	NM_080863.4		92591	24586687	NM_080863.4	ASB16	NP_543139.4	ILMN_1810881	0002320152	S	1958	TCGGCCTGTTCCCAGACTCGGCCTTCACCTCCCTTCTCCTCCTGTGTTTA	17	+	39611796-39611845	17q21.31c	Homo sapiens ankyrin repeat and SOCS box-containing 16 (ASB16), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		MGC141877; MGC141876; FLJ30165	MGC141877; MGC141876; FLJ30165
Homo sapiens	RefSeq	NM_012395.2	ILMN_12419	PFTK1	NM_012395.2	NM_012395.2		5218	32130539	NM_012395.2	PFTK1	NP_036527.1	ILMN_2171295	0006400553	S	4259	GGAGCACCTCCAGGCTTGCAAAGAAAGTGAGGCCTCTTGGTATCCTTTCC	7	+	90676015-90676064	7q21.13c	Homo sapiens PFTAIRE protein kinase 1 (PFTK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9202329] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9202329] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16775625] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17517622] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16775625] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA0834; PFTAIRE1	KIAA0834; PFTAIRE1
Homo sapiens	RefSeq	XM_941613.1	ILMN_44255	LOC654046	XM_941613.1	XM_941613.1		654046	88959154	XM_941613.1	LOC654046	XP_946706.1	ILMN_1656655	0002060307	S	628	GGGCACCTCATGGAGTGTGGACCAACTCAGGGAACAGGATGGGAGACAGT					PREDICTED: Homo sapiens hypothetical protein LOC654046 (LOC654046), mRNA.					
Homo sapiens	RefSeq	NM_016552.2	ILMN_24429	ANKMY1	NM_016552.2	NM_016552.2		51281	75750528	NM_016552.2	ANKMY1	NP_057636.2	ILMN_1799369	0006200358	I	2124	CAAGTCTGAAGCTCAGCAATGAGCCAGGCCCTCCCCAAGCCTACTACAGC	2	-	241451352-241451401	2q37.3e	Homo sapiens ankyrin repeat and MYND domain containing 1 (ANKMY1), transcript variant 1, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp686L21237; DKFZp686D20155; FLJ20499; ZMYND13	DKFZp686L21237; DKFZp686D20155; FLJ20499; ZMYND13
Homo sapiens	RefSeq	XM_945154.1	ILMN_166861	LOC649095	XM_001131851.1	XM_001131851.1		649095	113429350	XM_001131851.1	LOC649095	XP_001131851.1	ILMN_1728645	0006480246	A	129	GAACACGTTCGGGTTTTGGTTTTGTTTCGTTCACCTCTGTCTAGATGCAA	22	-	23905192-23905241	22q11.23c	PREDICTED: Homo sapiens hypothetical LOC649095 (LOC649095), mRNA.					
Homo sapiens	RefSeq	NM_021645.4	ILMN_10573	UTP14C	NM_021645.4	NM_021645.4		9724	51871373	NM_021645.4	UTP14C	NP_067677.4	ILMN_1686645	0007560674	S	5269	GTCATTTTTGAGTGGTCCAAGCCTGCTGTTTTGAACCCACAGCAGTGGAG	13	+	51505477-51505526	13q14.3d	Homo sapiens UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast) (UTP14C), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	UTP14B; KIAA0266; MGC104971; 2700066J21Rik	UTP14B; KIAA0266; MGC104971; 2700066J21Rik
Homo sapiens	RefSeq	NM_022720.5	ILMN_1552	DGCR8	NM_022720.5	NM_022720.5		54487	51093841	NM_022720.5	DGCR8	NP_073557.3	ILMN_1694223	0000290053	S	4183	CCCCTAAAGGTTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCAC	22	+	18479142-18479191	22q11.21d	Homo sapiens DiGeorge syndrome critical region gene 8 (DGCR8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15574589] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	Any process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule [goid 31053] [pmid 15574589] [evidence IDA]; Any process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule [goid 31053] [pmid 15531877] [evidence IDA]	Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15574589] [evidence IPI]	Gy1; DGCRK6; C22orf12	Gy1; DGCRK6; C22orf12
Homo sapiens	RefSeq	XM_937108.1	ILMN_32335	LOC648058	XM_937108.1	XM_937108.1		648058	89037110	XM_937108.1	LOC648058	XP_942201.1	ILMN_1697120	0001430193	S	3	GGGGGTGAGAGTATGCTTGTGTTTTTTACATGAGATGAATGAACCGTGCG					PREDICTED: Homo sapiens hypothetical protein LOC648058 (LOC648058), mRNA.					
Homo sapiens	Unigene	Hs.112893	ILMN_75205	HS.112893	Hs.112893		Hs.112893		28290302	BX119753			ILMN_1830837	0001710615	S	115	GAAAGACTCGGAGAACTGCTAGGGAGCTGGGAGAGAACTGTGTGGAGCCA	9	+	14780747-14780796		BX119753 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998M022622 ; IMAGE:1049257, mRNA sequence					
Homo sapiens	RefSeq	XM_931489.1	ILMN_41569	LOC643327	XM_943324.2	XM_943324.2		643327	113417889	XM_943324.2	LOC643327	XP_948417.1	ILMN_1665201	0007160296	S	7	GTAAAGGCTATGGTGCTCCCTTTACACCCAAGTAAAGGCATGTGGTTTGG				6p25.2a	PREDICTED: Homo sapiens hypothetical LOC643327 (LOC643327), mRNA.					
Homo sapiens	RefSeq	NM_019854.3	ILMN_24459	PRMT8	NM_019854.3	NM_019854.3		56341	74099698	NM_019854.3	PRMT8	NP_062828.3	ILMN_1714121	0002480524	S	2184	GTGATTAGTTCGCCCCTTCCCCACCCCTTACCAGATGTTAAGCAGCTATG	12	+	3573241-3573290	12p13.32b	Homo sapiens protein arginine methyltransferase 8 (PRMT8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16051612] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16051612] [evidence IDA]	The modification of histones by addition of methyl groups [goid 16571] [pmid 16051612] [evidence IDA]; The addition of a methyl group to an arginine residue in a protein [goid 18216] [pmid 16051612] [evidence IDA]; The process of methylation of peptidyl-arginine to form peptidyl-N(omega),N(omega)-dimethyl-L-arginine [goid 19919] [pmid 16051612] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein binding [goid 43393] [pmid 16051612] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16051612] [evidence IPI]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [pmid 16051612] [evidence IDA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate [goid 8757] [pmid 16051612] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the addition of a methyl group to either of the unmethylated terminal nitrogen atoms (also called omega nitrogen) in peptidyl-arginine to form an omega-N-G-monomethylated arginine residue [goid 35241] [pmid 16051612] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16051612] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16051612] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HRMT1L4; HRMT1L3	HRMT1L4; HRMT1L3
Homo sapiens	RefSeq	NM_022098.2	ILMN_23195	XPNPEP3	NM_022098.2	NM_022098.2		63929	38195085	NM_022098.2	XPNPEP3	NP_071381.1	ILMN_1659000	0001710446	S	2348	GTATATACTAAAGATCCAGACATCAGGGCTGGGCACAGCGGTTCCGCCTG	22	+	39653117-39653166	22q13.2a	Homo sapiens X-prolyl aminopeptidase (aminopeptidase P) 3, putative (XPNPEP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	APP3	APP3
Homo sapiens	RefSeq	NM_022098.2	ILMN_23195	XPNPEP3	NM_022098.2	NM_022098.2		63929	38195085	NM_022098.2	XPNPEP3	NP_071381.1	ILMN_2054928	0002100309	S	2760	AAAAAATGATTTCTGGCCGGGCGTGGTGGCTCAAGCCTGTAATCCCAGCA	22	+	39653529-39653578	22q13.2a	Homo sapiens X-prolyl aminopeptidase (aminopeptidase P) 3, putative (XPNPEP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	APP3	APP3
Homo sapiens	RefSeq	XM_371491.3	ILMN_169224	LOC388946	XM_371491.4	XM_371491.4		388946	113412965	XM_371491.4	LOC388946	XP_371491.4	ILMN_1752257	0005050288	S	728	TGCGCATGGAGTTCGAGCTCACGCGGCTCAAGTACCTGCATGAGAAGAAC	2	+	46561256-46561305	2p21b	PREDICTED: Homo sapiens hypothetical LOC388946 (LOC388946), mRNA.					
Homo sapiens	RefSeq	XM_943925.1	ILMN_37200	LOC388743	XM_943925.1	XM_943925.1		388743	88952795	XM_943925.1	LOC388743	XP_949018.1	ILMN_1753766	0005310148	I	347	CCAGCACTGGCCAAGCTCTTATGCTTGCTCTGAAACCTTCTTGGGAGGAG				1q41e	PREDICTED: Homo sapiens similar to calpain 8, transcript variant 5 (LOC388743), mRNA.					
Homo sapiens	RefSeq	NM_002318.2	ILMN_22633	LOXL2	NM_002318.2	NM_002318.2		4017	67782347	NM_002318.2	LOXL2	NP_002309.1	ILMN_1656802	0007320674	S	3621	TGGTTTTCTCCGGTGGACATGGGTCCTCAGATCCCCTCCAGCCCAGTGTG	8	-	23211364-23211413	8p21.3a	Homo sapiens lysyl oxidase-like 2 (LOXL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9079631] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9079631] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9079631] [evidence TAS]; The inherent decline over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 7568] [pmid 9079631] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + H2O2 [goid 4720] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9079631] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LOR2; WS9-14	LOR2; WS9-14
Homo sapiens	RefSeq	NM_171982.2	ILMN_181526	TRIM35	NM_171982.3	NM_171982.3		23087	94536781	NM_171982.3	TRIM35	NP_741983.2	ILMN_1671765	0002760634	A	3847	TATCCCATCAACAGGGCATGAGGGTTCTGATGACTCCACATCCCTCAGTG	8	-	27198651-27198700	8p21.2a	Homo sapiens tripartite motif-containing 35 (TRIM35), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HLS5; MGC17233; KIAA1098; MAIR	HLS5; MGC17233; KIAA1098; MAIR
Homo sapiens	RefSeq	NM_001004685.1	ILMN_23040	OR2F2	NM_001004685.1	NM_001004685.1		135948	52317195	NM_001004685.1	OR2F2	NP_001004685.1	ILMN_1772073	0004810373	S	756	CGGCACAACGATTTTCACTTACATCCAGCCCCACTCTGGTCCCTCAGTCC	7	+	143264014-143264063	7q35a	Homo sapiens olfactory receptor, family 2, subfamily F, member 2 (OR2F2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR7-1	OR7-1
Homo sapiens	RefSeq	NM_207401.1	ILMN_9612	C1ORF229	NM_207401.1	NM_207401.1		388759	46409433	NM_207401.1	C1orf229	NP_997284.1	ILMN_1666825	0002850050	S	2141	CCGCCATTGCTATTTCGTTCACTGTGTCTGGCTTCTCTACCAAGGCGCCG	1	-	247273529-247273578	1q44d	Homo sapiens chromosome 1 open reading frame 229 (C1orf229), mRNA.					
Homo sapiens	RefSeq	XM_376822.2	ILMN_35681	LOC401497	XM_376822.2	XM_376822.2		401497	89029218	XM_376822.2	LOC401497	XP_376822.1	ILMN_1767980	0000160129	S	121	AGGGGTGCCCACAGGCCCATGCCGAGCCACCCTCAGCCCCGCAGCCTCCC	9	-	30564834-30564883	9p21.1c-p21.1b	PREDICTED: Homo sapiens similar to PRO2738 (LOC401497), mRNA.					
Homo sapiens	RefSeq	XM_939206.1	ILMN_36194	LOC650116	XM_939206.1	XM_939206.1		650116	89042427	XM_939206.1	LOC650116	XP_944299.1	ILMN_1693949	0004120164	S	61	TCACTCTCTAGCCATTGTTTTTCACTAAAGGCAGTGAAGAGTCTTTGGGG					PREDICTED: Homo sapiens hypothetical protein LOC650116 (LOC650116), mRNA.					
Homo sapiens	RefSeq	NM_004937.1	ILMN_162678	CTNS	NM_004937.2	NM_004937.2		1497	119943109	NM_004937.2	CTNS	NP_004928.2	ILMN_1807719	0005910541	A	2751	GGGGGTCCCAGGACGTGCCTCATACATGACTTGAGCTTGTCAGTCCACTG	17	+	3511466-3511515	17p13.3a	Homo sapiens cystinosis, nephropathic (CTNS), transcript variant 2, mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 11150305] [evidence IDA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 9537412] [evidence NAS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11150305] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [pmid 15128704] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 9537412] [evidence NAS]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [pmid 15956064] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 17471495] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [pmid 7112129] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [pmid 15128704] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [pmid 9537412] [evidence NAS]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [pmid 16439594] [evidence IMP]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [pmid 17471495] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [evidence IEA]	Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [pmid 15128704] [evidence IMP]; Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [pmid 9537412] [evidence NAS]; Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [evidence IEA]	CTNS-LSB; PQLC4	CTNS-LSB; PQLC4
Homo sapiens	RefSeq	NM_004937.1	ILMN_162678	CTNS	NM_004937.2	NM_004937.2		1497	119943109	NM_004937.2	CTNS	NP_004928.2	ILMN_1738010	0007050347	I	1888	CTCCCCGGCCAGGCACGTGGCACCGTCGCCTTGACACCGCCATCTCTTTT	17	+	3510603-3510652	17p13.3a	Homo sapiens cystinosis, nephropathic (CTNS), transcript variant 2, mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 11150305] [evidence IDA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 9537412] [evidence NAS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11150305] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [pmid 15128704] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 9537412] [evidence NAS]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [pmid 15956064] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 17471495] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [pmid 7112129] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [pmid 15128704] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [pmid 9537412] [evidence NAS]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [pmid 16439594] [evidence IMP]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [pmid 17471495] [evidence IMP]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [evidence IEA]	Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [pmid 15128704] [evidence IMP]; Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [pmid 9537412] [evidence NAS]; Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [evidence IEA]	CTNS-LSB; PQLC4	CTNS-LSB; PQLC4
Homo sapiens	RefSeq	XR_037946.1	ILMN_347480	LOC727984	XR_037946.1	XR_037946.1		727984	169167913	XR_037946.1	LOC727984		ILMN_3213581	0000540333	A	67	CGTGTTCACTTTACGAACACTTGTGAAATGCCCAGGCCATCAGGGTAGGC				5q11.2e	PREDICTED: Homo sapiens misc_RNA (LOC727984), miscRNA.					
Homo sapiens	RefSeq	XM_944358.1	ILMN_33713	LOC648476	XM_944358.1	XM_944358.1		648476	88988347	XM_944358.1	LOC648476	XP_949451.1	ILMN_1670522	0003120189	A	160	CCTCTAGAACTAATATGTGAAAAACATTTAAATCAGAAAGTAAATGACAG					PREDICTED: Homo sapiens hypothetical protein LOC648476, transcript variant 1 (LOC648476), mRNA.					
Homo sapiens	RefSeq	NM_014508.2	ILMN_9058	APOBEC3C	NM_014508.2	NM_014508.2		27350	22907038	NM_014508.2	APOBEC3C	NP_055323.2	ILMN_1675684	0003120221	S	895	ACCCCCACAGACCCCGTTCCTCCAGCCTGCGTGCCCCTAACCTGGCTTTT	22	+	37744557-37744606	22q13.1c	Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C (APOBEC3C), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2 [goid 16814] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	APOBEC1L; PBI; ARDC2; ARP5; MGC19485; ARDC4; bK150C2.3	APOBEC1L; PBI; ARDC2; ARP5; MGC19485; ARDC4; bK150C2.3
Homo sapiens	RefSeq	NM_022036.2	ILMN_4292	GPRC5C	NM_022036.2	NM_022036.2		55890	40217830	NM_022036.2	GPRC5C	NP_071319.2	ILMN_1774528	0004150209	I	553	GCAGGGCCAGAAACTCCCATCTCCCTCACCAGCCGGAAAGTACGAGTCGG	17	+	69939814-69939863	17q25.1b	Homo sapiens G protein-coupled receptor, family C, group 5, member C (GPRC5C), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10783259] [evidence TAS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10783259] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 10783259] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC131820; RAIG3; RAIG-3	MGC131820; RAIG3; RAIG-3
Homo sapiens	RefSeq	NM_018653.3	ILMN_4292	GPRC5C	NM_022036.2	NM_022036.2		55890	40217830	NM_022036.2	GPRC5C	NP_071319.2	ILMN_1724211	0001170477	A	2132	CATGGGTGTCCCCACCCACTCCTCAGTGTTTGTGGAGTCGAGGAGCCAAC	17	+	69954922-69954971	17q25.1b	Homo sapiens G protein-coupled receptor, family C, group 5, member C (GPRC5C), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10783259] [evidence TAS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10783259] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 10783259] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC131820; RAIG3; RAIG-3	MGC131820; RAIG3; RAIG-3
Homo sapiens	RefSeq	XM_934868.1	ILMN_45619	LOC646168	XM_934868.1	XM_934868.1		646168	88965698	XM_934868.1	LOC646168	XP_939961.1	ILMN_1654496	0001850400	A	200	GTGAGACCCACACTGGGTCAGCTCCATCAAGGAGAAGAACATTCCACCCA	3	+	169103856-169103905		PREDICTED: Homo sapiens hypothetical protein LOC646167, transcript variant 1 (LOC646168), mRNA.					
Homo sapiens	RefSeq	XM_001714155.1	ILMN_335985	LOC100132966	XM_001714155.1	XM_001714155.1		100132966	169162923	XM_001714155.1	LOC100132966	XP_001714207.1	ILMN_3236457	0005960059	S	121	ATCCTTGCGCTTCACGCAACATCGCGGCCCATGATCATGCCCCAATTCCC	1	-	204303706-204303755	1q32.1g	PREDICTED: Homo sapiens hypothetical protein LOC100132966 (LOC100132966), mRNA.					
Homo sapiens	RefSeq	XM_936031.1	ILMN_36239	LOC653855	XM_936031.1	XM_936031.1		653855	89027598	XM_936031.1	LOC653855	XP_941124.1	ILMN_1668985	0001400538	I	140	CATCTCCTGCTCTAGATCTTCTTTGGCTCTCTCTATCCCTCTGAAATCTC					PREDICTED: Homo sapiens similar to rho guanine nucleotide exchange factor 5 isoform 1, transcript variant 2 (LOC653855), mRNA.					
Homo sapiens	RefSeq	XM_372423.2	ILMN_31157	LOC390231	XM_372423.2	XM_372423.2		390231	89034185	XM_372423.2	LOC390231	XP_372423.2	ILMN_1732096	0006040520	A	1072	TGCAGAGAAGCCTGGACAAAGAGGAATGACATGCGACTTGACTCTGAGGG	11	+	89090407-89090456	11q14.3b	PREDICTED: Homo sapiens similar to tripartite motif protein 17 (LOC390231), mRNA.					
Homo sapiens	Unigene	Hs.568618	ILMN_120799	HS.568618	Hs.568618		Hs.568618		11151430	BF237512			ILMN_1857637	0003130243	S	614	GGCCAATCACCAGTATGACCAGTCCAGCGAAGAGCAACTGTGGCAGGCTG	1	+	16356139-16356139:16356141-16356151:16356153-16356171:16356174-16356190:16356193-16356194		601842006F1 NIH_MGC_46 Homo sapiens cDNA clone IMAGE:4079761 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001004348.1	ILMN_2664	FLJ16171	NM_001004348.1	NM_001004348.1		441116	51972271	NM_001004348.1	FLJ16171	NP_001004348.1	ILMN_1745554	0003190184	S	1592	GCGTGAACTACTGCTCCCAGCTGAGAGCTCACTTTTGTTTGCTAGTGGTG	5	-	174279192-174279241	5q35.2b-q35.2c	Homo sapiens FLJ16171 protein (FLJ16171), mRNA.					
Homo sapiens	RefSeq	NM_001001687.1	ILMN_8081	FLJ26850	NM_001001687.1	NM_001001687.1		400710	48717379	NM_001001687.1	FLJ26850	NP_001001687.1	ILMN_1732860	0007000711	S	1133	GAGTTGGCTGTGGGTGCCAGAATCACAGGGAGGTCTACAGGGAAGGTGCA	19	+	55261470-55261519	19q13.33b	Homo sapiens FLJ26850 protein (FLJ26850), mRNA.				MGC163416; MGC163414	MGC163416; MGC163414
Homo sapiens	RefSeq	NM_005357.2	ILMN_896	LIPE	NM_005357.2	NM_005357.2		3991	21328445	NM_005357.2	LIPE	NP_005348.2	ILMN_1670693	0001170059	S	3500	CGACACTAAAAGCCTGTTGTTCCCATCTGCGCCGGCCTCCGTCATGAATG	19	-	47597762-47597803:47597804-47597811	19q13.2c	Homo sapiens lipase, hormone-sensitive (LIPE), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 3420405] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 46340] [evidence IEA]	Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17026959] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reactions: diacylglycerol + H2O = monoacylglycerol + a carboxylate, triacylglycerol + H2O = diacylglycerol + a carboxylate, and monoacylglycerol + H2O = glycerol + a carboxylate [goid 33878] [evidence IEA]	LHS; HSL	LHS; HSL
Homo sapiens	RefSeq	NM_133377.2	ILMN_179479	RAD1	NM_133377.2	NM_133377.2		5810	76881814	NM_133377.2	RAD1	NP_596868.1	ILMN_1763765	0005220243	I	1	GCTGAAGTGCTCACGGCTCACTGCAGTTTCAAGTTCCTGGGCTCAAAGAT	5	-	34953994-34953998:34954094-34954138	5p13.2d	Homo sapiens RAD1 homolog (S. pombe) (RAD1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9660799] [evidence IC ]	A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [pmid 9660799] [evidence NAS]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [pmid 9716408] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9872989] [evidence TAS]; Progression through prophase of meiosis I; divided into several stages [goid 7128] [pmid 9716408] [evidence TAS]	Interacting selectively with damaged DNA [goid 3684] [pmid 9660799] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10359610] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence ISS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 9660799] [evidence IDA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	REC1; HRAD1	REC1; HRAD1
Homo sapiens	RefSeq	NM_133377.2	ILMN_179479	RAD1	NM_133377.2	NM_133377.2		5810	76881814	NM_133377.2	RAD1	NP_596868.1	ILMN_1737635	0002260450	A	4446	TGATTTCCCATTCGATGATGTAGTGCTTCCACCGAGAATTGATGAAATGC	5	-	34941391-34941440	5p13.2d	Homo sapiens RAD1 homolog (S. pombe) (RAD1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9660799] [evidence IC ]	A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [pmid 9660799] [evidence NAS]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [pmid 9716408] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9872989] [evidence TAS]; Progression through prophase of meiosis I; divided into several stages [goid 7128] [pmid 9716408] [evidence TAS]	Interacting selectively with damaged DNA [goid 3684] [pmid 9660799] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10359610] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [evidence ISS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 9660799] [evidence IDA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	REC1; HRAD1	REC1; HRAD1
Homo sapiens	RefSeq	NM_007034.3	ILMN_20230	DNAJB4	NM_007034.3	NM_007034.3		11080	24431959	NM_007034.3	DNAJB4	NP_008965.2	ILMN_2222317	0004250537	S	1779	GTAATGGCAATTTCTCTCCTGTGGAAATCCCAATTGCTTGAATTACTGAT	1	+	78255125-78255174	1p31.1e	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 4 (DNAJB4), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 9546042] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 9546042] [evidence TAS]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9546042] [evidence TAS]	DjB4; DNAJW; HLJ1	DjB4; DNAJW; HLJ1
Homo sapiens	RefSeq	NM_007034.3	ILMN_20230	DNAJB4	NM_007034.3	NM_007034.3		11080	24431959	NM_007034.3	DNAJB4	NP_008965.2	ILMN_1813019	0005420528	S	1627	CACCTTCTGAAATGCTGCTATAGGGCTGGTATCTGTAAAAGAATATCCTG	1	+	78254973-78255022	1p31.1e	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 4 (DNAJB4), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 9546042] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 9546042] [evidence TAS]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9546042] [evidence TAS]	DjB4; DNAJW; HLJ1	DjB4; DNAJW; HLJ1
Homo sapiens	RefSeq	NM_018698.3	ILMN_168294	NXT2	NM_018698.3	NM_018698.3		55916	21361723	NM_018698.3	NXT2	NP_061168.2	ILMN_1785107	0005270307	S	2605	ATGGCTGGAACTACTCGTATAAGGACTAGACTGTATTTTTGACATGCTCC	X	+	108674482-108674531	Xq22.3c	Homo sapiens nuclear transport factor 2-like export factor 2 (NXT2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	P15-2	P15-2
Homo sapiens	RefSeq	NM_032330.1	ILMN_22572	CAPNS2	NM_032330.1	NM_032330.1		84290	14161691	NM_032330.1	CAPNS2	NP_115706.1	ILMN_1699809	0002850241	S	817	GACCATGTATTCCTGAAGTGGGAACTGAGAAGTCAAGATCCTCCCTGGAG	16	+	54158901-54158916:54158917-54158950	16q12.2c	Homo sapiens calpain, small subunit 2 (CAPNS2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC14804; MGC12536	MGC14804; MGC12536
Homo sapiens	RefSeq	XM_001723081.1	ILMN_345757	LOC100130249	XM_001723081.1	XM_001723081.1		100130249	169160962	XM_001723081.1	LOC100130249	XP_001723133.1	ILMN_3265338	0006380520	M	244	TCTGGAGGATGGTCAGGAAAACAAACTCAACAGCCAGTGCCTCCCCTCAG				1q42.3a	PREDICTED: Homo sapiens hypothetical protein LOC100130249 (LOC100130249), mRNA.					
Homo sapiens	RefSeq	XM_936526.3	ILMN_33944	LOC388795	XM_936526.3	XM_936526.3		388795	169214999	XM_936526.3	LOC388795	XP_941619.3	ILMN_3201134	0001740274	A	4084	GAAGTTCCCTGTGGACCTAGACAATGGGGATGTTGTCGTGGGTGCCATGG				20q11.21c	PREDICTED: Homo sapiens similar to hCG2019498 (LOC388795), mRNA.					
Homo sapiens	RefSeq	XM_932216.1	ILMN_33382	LOC644500	XM_932216.2	XM_932216.2		644500	113416847	XM_932216.2	LOC644500	XP_937309.2	ILMN_1706554	0007560176	S	537	TGGGGACACAAGGCCGTCCGAAGGAACCGGAGTCCACACCAGCGGCTCTC	5	+	160907911-160907960	5q34a	PREDICTED: Homo sapiens hypothetical LOC644500 (LOC644500), mRNA.					
Homo sapiens	RefSeq	NM_032390.3	ILMN_176031	MKI67IP	NM_032390.3	NM_032390.3		84365	37059742	NM_032390.3	MKI67IP	NP_115766.2	ILMN_1786189	0001090327	S	1295	GTCCATCTACATGGTTTGTCGGGGACATTTAACTCATGGAGGTGCTTTAG	2	-	122201349-122201398	2q14.3a	Homo sapiens MKI67 (FHA domain) interacting nucleolar phosphoprotein (MKI67IP), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 11342549] [evidence IDA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11342549] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11342549] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11342549] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 11342549] [evidence NAS]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [pmid 11342549] [evidence NAS]; The chemical reactions and pathways involving rRNA, ribosomal RNA, a structural constituent of ribosomes [goid 16072] [pmid 11342549] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11342549] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11342549] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	NIFK; Nopp34	NIFK; Nopp34
Homo sapiens	RefSeq	NM_003654.2	ILMN_19267	CHST1	NM_003654.3	NM_003654.3		8534	141802832	NM_003654.3	CHST1	NP_003645.1	ILMN_1677719	0005720451	S	2353	ATGGTGTCCATCCTTTCCCCATCCCTGCCTCCTGCCCCTGACGCCCATTT	11	-	45627318-45627367	11p11.2c	Homo sapiens carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 (CHST1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9405439] [evidence NAS]	The chemical reactions and pathways involving polysaccharides, a polymer of more than 10 monosaccharide residues joined by glycosidic linkages [goid 5976] [pmid 9405439] [evidence TAS]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [pmid 10330415] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The chemical reactions and pathways involving keratan sulfate, a glycosaminoglycan with repeat units consisting of beta-1,4-linked D-galactopyranosyl-beta-(1,4)-N-acetyl-D-glucosamine 6-sulfate and with variable amounts of fucose, sialic acid and mannose units; keratan sulfate chains are covalently linked by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylose to peptidyl-threonine or serine residues [goid 42339] [pmid 9405439] [evidence IDA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + keratan = adenosine 3',5'-bisphosphate + keratan 6'-sulfate [goid 45130] [pmid 9405439] [evidence IDA]	KS6ST; KSGal6ST; C6ST	KSGal6ST; C6ST; KS6ST
Homo sapiens	RefSeq	NR_030241.1	ILMN_387942	MIR532	NR_030241.1	NR_030241.1		693124	262205570	NR_030241.1	MIR532		ILMN_3308647	0001440048	S	41	TGGCATCTTAATTACCCTCCCACACCCAAGGCTTGCAAAAAAGCGAGCCT				Xp11.23a	Homo sapiens microRNA 532 (MIR532), microRNA.					
Homo sapiens	RefSeq	XR_016304.1	ILMN_177723	LOC441416	XR_016304.1	XR_016304.1		441416	113420718	XR_016304.1	LOC441416		ILMN_3279358	0000840246	M	296	CCGGGCTTTCCAGAGCCTCGCAAGTGGACTTAGAAAATACCGCGCCCTCA	9	-	44167158-44167207	9p11.2c	PREDICTED: Homo sapiens misc_RNA (LOC441416), miscRNA.					
Homo sapiens	RefSeq	XM_001131873.1	ILMN_170483	LOC729956	XM_001131873.1	XM_001131873.1		729956	113428344	XM_001131873.1	LOC729956	XP_001131873.1	ILMN_3230102	0002470615	A	360	TGGCACCTGCCACTACCGCTTCTGCTGTGAGCACCGTCACATGCGCCTGG	19	-	60645672-60645721	19q13.42c	PREDICTED: Homo sapiens hypothetical LOC729956 (LOC729956), mRNA.					
Homo sapiens	RefSeq	XM_001131873.1	ILMN_170483	LOC729956	XM_001131873.1	XM_001131873.1		729956	113428344	XM_001131873.1	LOC729956	XP_001131873.1	ILMN_3234629	0000870347	I	1505	ACCTGCCCCAGCACCTGCGCACGGCCAGCAAGAACGAGGTGACTGTCTGA				19q13.42c	PREDICTED: Homo sapiens hypothetical LOC729956 (LOC729956), mRNA.					
Homo sapiens	RefSeq	XM_926213.1	ILMN_38848	LOC653149	XM_926213.1	XM_926213.1		653149	88942939	XM_926213.1	LOC653149	XP_931306.1	ILMN_1662908	0004810563	S	507	GGCTTGGGCCTACAATGACTTTTCTGAGAGAGGAGCTTTGGGAAGAGCCC	1	+	108778525-108778556:108791848-108791865	1p13.3c	PREDICTED: Homo sapiens similar to myomegalin (LOC653149), mRNA.					
Homo sapiens	RefSeq	NM_002098.3	ILMN_1672	GUCA1B	NM_002098.3	NM_002098.3		2979	62751778	NM_002098.3	GUCA1B	NP_002089.3	ILMN_2211728	0002320608	S	1929	CCTTGGTTATGTCTTGGCAGCACAGTGAGCAGGTCGGACTAGGCGAACAG	6	-	42259291-42259340	6p21.1f	Homo sapiens guanylate cyclase activator 1B (retina) (GUCA1B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses guanylyl cyclase activity [goid 7168] [pmid 1327879] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 1409606] [evidence TAS]; The regulated release of a fluid by a cell or group of cells in a multicellular organism [goid 7589] [pmid 1327879] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA];  [goid 8048] [pmid 1409606] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	GUCA2; GCAP2; DKFZp686E1183	GUCA2; GCAP2; DKFZp686E1183
Homo sapiens	RefSeq	XM_001130590.2	ILMN_180967	LOC729549	XM_001130590.2	XM_001130590.2		729549	169192124	XM_001130590.2	LOC729549	XP_001130590.2	ILMN_3228248	0002650646	A	133	GCAGACAGAAAGTGCCGGCTTGATGTCCGTGACAGTGAAAACAGGACACC	10	-	27670083-27670132	10p12.1a	PREDICTED: Homo sapiens similar to UNCoordinated family member (unc-44) (LOC729549), mRNA.					
Homo sapiens	RefSeq	NM_207461.1	ILMN_6225	FLJ44881	NM_207461.1	NM_207461.1		400661	46409543	NM_207461.1	FLJ44881	NP_997344.1	ILMN_1709607	0003830431	S	1987	CTTTCAAGAGACCATCAGAAAGAGGCTGCTTGGGTCCCGTCCGAGGAGAG	18	+	72534230-72534279	18q23b	Homo sapiens FLJ44881 protein (FLJ44881), mRNA.					
Homo sapiens	RefSeq	NM_001004315.1	ILMN_2768	FLJ46210	NM_001004315.1	NM_001004315.1		389152	51972205	NM_001004315.1	FLJ46210	NP_001004315.1	ILMN_1731326	0002480349	S	2555	GGACTTGAGAAGACACAAGTGGAAGGAGAAAGGCAGTAACTGTAGGGTGC	3	-	140243686-140243735	3q22.3c	Homo sapiens FLJ46210 protein (FLJ46210), mRNA.					
Homo sapiens	RefSeq	XM_001717070.1	ILMN_348192	LOC100134387	XM_001717070.1	XM_001717070.1		100134387	169211439	XM_001717070.1	LOC100134387	XP_001717122.1	ILMN_3246155	0004220427	S	1400	CCTTAAAGTGCCTTGCCATACACGATGTCATAAGGTATGTAGACAACTAG					PREDICTED: Homo sapiens similar to DEAH (Asp-Glu-Ala-His) box polypeptide 40 (LOC100134387), mRNA.					
Homo sapiens	RefSeq	NM_004924.3	ILMN_2269	ACTN4	NM_004924.3	NM_004924.3		81	34452697	NM_004924.3	ACTN4	NP_004915.2	ILMN_1725534	0000270437	S	3314	AGGAGATGGCCCCAACAAGCACCCCGCTTTTGCAGCAGAGGAGCTGAGTT	19	+	39220591-39220640	19q13.2a	Homo sapiens actinin, alpha 4 (ACTN4), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9508771] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9508771] [evidence IDA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IEA]; A temporary protrusion or retractile process of a cell, associated with flowing movements of the protoplasm, and serving for locomotion and feeding [goid 31143] [pmid 1629252] [evidence TAS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11948184] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 15619032] [evidence IDA]	Any process that activates or increases the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 32417] [pmid 11948184] [evidence NAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 16807302] [evidence NAS]; Any process that activates, maintains or increases the rate of pinocytosis. Pinocytosis is the process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 48549] [evidence IEA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [pmid 15048094] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [pmid 9508771] [evidence IDA]	Interacting selectively with a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose [goid 1882] [pmid 12411747] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [pmid 8104223] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15841212] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15619032] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15841212] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 12411747] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp686K23158; FSGS1; FSGS	DKFZp686K23158; FSGS1; FSGS
Homo sapiens	RefSeq	NM_001001395.1	ILMN_28403	LMO3	NM_001001395.1	NM_001001395.1		55885	47778934	NM_001001395.1	LMO3	NP_001001395.1	ILMN_1694913	0003060437	I	6	ACAGTGGGGAGCTGTGCGGATGGGTGAAGTGCATGTATGCCTGCCTAGAC	12	-	16760969-16761018	12p12.3d	Homo sapiens LIM domain only 3 (rhombotin-like 2) (LMO3), transcript variant 2, mRNA.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RBTNL2; RBTN3; RHOM3; DAT1; Rhom-3; MGC26081	RHOM3; Rhom-3; RBTNL2; RBTN3; DAT1; MGC26081
Homo sapiens	RefSeq	XM_934622.1	ILMN_36737	LOC647264	XM_934624.2	XM_934624.2		647264	113424184	XM_934624.2	LOC647264	XP_939717.2	ILMN_1680230	0006270341	S	436	TGACAGAGTCTTGGACCTCTAGCCTCACATTTCTTTGAATGAAATCATGG	13	-	63304642-63304691	13q21.31c	PREDICTED: Homo sapiens hypothetical LOC647264 (LOC647264), mRNA.					
Homo sapiens	RefSeq	XR_015530.2	ILMN_162266	LOC729392	XR_015530.2	XR_015530.2		729392	169169597	XR_015530.2	LOC729392		ILMN_3227582	0003400348	A	1765	GGTGCCCAGAGGTCAGAAGTGAGATATACCCATAGATCCCAGACCTCCCG	6	+	26973650-26973699	6p22.1d	PREDICTED: Homo sapiens misc_RNA (LOC729392), miscRNA.					
Homo sapiens	RefSeq	NM_014655.1	ILMN_25848	SLC25A44	NM_014655.1	NM_014655.1		9673	45237192	NM_014655.1	SLC25A44	NP_055470.1	ILMN_1810514	0004810615	S	3291	AGAAACCTCTGGGAGACTGGAAACCTGATTGGAGCACTGAGGAACAAGGG	1	+	154449039-154449088	1q22d	Homo sapiens solute carrier family 25, member 44 (SLC25A44), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ90431; KIAA0446; RP11-54H19.3	FLJ90431; KIAA0446; RP11-54H19.3
Homo sapiens	RefSeq	NM_001101320.1	ILMN_353218	SERPINE3	NM_001101320.1	NM_001101320.1		647174	157674355	NM_001101320.1	SERPINE3	NP_001094790.1	ILMN_3242398	0002060253	S	1092	CCACAAGGCCAAGATTGAAGTTTTGGAGGAAGGCACCAAGGCATCTGGAG	13	+	50833446-50833495	13q14.3c	Homo sapiens serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 (SERPINE3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Homo sapiens	RefSeq	NM_172099.1	ILMN_31470	CD8B	NM_172099.2	NM_172099.2		926	90421321	NM_172099.2	CD8B	NP_742097.1	ILMN_1666074	0004480167	I	677	CAATATCGTTTGCCTGAAAATAAGTGGTTTCACAACTTGCTGTTGTTTTC	2	-	87069444-87069493	2p11.2e	Homo sapiens CD8b molecule (CD8B), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 16103193] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16103193] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3145195] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3145195] [evidence TAS]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 11131152] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 11131152] [evidence NAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 9830036] [evidence NAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 9830036] [evidence NAS]; Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism [goid 50690] [pmid 16103193] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2493728] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 11131152] [evidence NAS]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 11131152] [evidence NAS]	Leu2; MGC119115; LYT3; CD8B1; Ly3	MGC119115; LYT3; Ly3; CD8B; Leu2
Homo sapiens	RefSeq	NM_020861.1	ILMN_15564	ZBTB2	NM_020861.1	NM_020861.1		57621	24308240	NM_020861.1	ZBTB2	NP_065912.1	ILMN_1766247	0000050440	S	2898	GGGCCTCACAAGACAAAACAGGAGCCAGAAGTAAGGACTGAAGGAGAAGG	6	-	151727081-151727130	6q25.1c	Homo sapiens zinc finger and BTB domain containing 2 (ZBTB2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF437	ZNF437
Homo sapiens	RefSeq	XM_001723572.1	ILMN_345651	LOC100128392	XM_001723572.1	XM_001723572.1		100128392	169205431	XM_001723572.1	LOC100128392	XP_001723624.1	ILMN_3265228	0002750576	M	1147	CACAGACGGCCGGCAGAGCTGGGAGGGATGGATTCTATGTTTTAAGGGCC				12q14.2b	PREDICTED: Homo sapiens hypothetical LOC100128392 (LOC100128392), mRNA.					
Homo sapiens	RefSeq	NM_017651.3	ILMN_23469	AHI1	NM_017651.3	NM_017651.3		54806	31542700	NM_017651.3	AHI1	NP_060121.3	ILMN_1791006	0005860253	S	5322	GAGTGGCACTGATAACTGGTGAAGCCTACAGCCATCCGCCCAAAAGTCTG	6	-	135646974-135647023	6q23.3a	Homo sapiens Abelson helper integration site 1 (AHI1), mRNA.				FLJ14023; FLJ20069; DKFZp686J1653; JBTS3; dJ71N10.1; ORF1; AHI-1	FLJ14023; FLJ20069; DKFZp686J1653; JBTS3; dJ71N10.1; ORF1; AHI-1
Homo sapiens	RefSeq	XM_927191.1	ILMN_34992	LOC643933	XM_938367.1	XM_938367.1		643933	89042318	XM_938367.1	LOC643933	XP_943460.1	ILMN_1670589	0006200653	S	61	GCGGCAGGACGCCCTCCTCCCGCGCTCCTTCCCCGGCGCCGGCGGAGTCC				17p13.1c	PREDICTED: Homo sapiens hypothetical LOC643933 (LOC643933), mRNA.					
Homo sapiens	RefSeq	NM_145888.1	ILMN_10270	KLK10	NM_002776.4	NM_002776.4		5655	117422431	NM_002776.4	KLK10	NP_002767.2	ILMN_1688205	0005960192	A	1212	CTCACCTCATTCCCCCACCTATCCCCATTCTCTGCCTGTACTGAAGCTGA	19	-	56209656-56209705	19q13.33d	Homo sapiens kallikrein-related peptidase 10 (KLK10), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8764136] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	NES1; PRSSL1	NES1; PRSSL1
Homo sapiens	RefSeq	XM_943334.1	ILMN_42757	C10ORF128	XM_931112.2	XM_931112.2		170371	113421510	XM_931112.2	C10orf128	XP_936205.1	ILMN_1674046	0000450674	A	228	ACTTATTTGACGACGACTCTTCCGACCTGAAAAGCACGCCTGGGGGCCTC	10	-	50044923-50044972	10q11.22d	PREDICTED: Homo sapiens chromosome 10 open reading frame 128, transcript variant 5 (C10orf128), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_928053.1	ILMN_38353	LOC643008	XM_928053.2	XM_928053.2		643008	113427049	XM_928053.2	LOC643008	XP_933146.1	ILMN_1729644	0003180435	I	2135	CAGACACCCTAGGACAGACACCCAAAAGGTGTTGGGGGTGCTAGTGACGG	17	+	71146233-71146282	17q25.1c	PREDICTED: Homo sapiens PP12104, transcript variant 1 (LOC643008), mRNA.		The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]		
Homo sapiens	RefSeq	NM_003960.2	ILMN_28294	NAT8	NM_003960.2	NM_003960.2		9027	13929473	NM_003960.2	NAT8	NP_003951.2	ILMN_1815480	0005290544	S	326	TCTGGATCCTGGCTTCTAGCCCTCGTGTTCAGCATCAGCCTCTTCCCTGC	2	-	73722045-73722094	2p13.2a	Homo sapiens N-acetyltransferase 8 (camello like) (NAT8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11397015] [evidence NAS]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [pmid 11397015] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 9852678] [evidence TAS]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [pmid 11397015] [evidence NAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GLA; CML1; TSC510; TSC501	GLA; CML1; TSC510; TSC501
Homo sapiens	RefSeq	NM_032529.1	ILMN_5826	KIAA1875	NM_032529.1	NM_032529.1		340390	60218907	NM_032529.1	KIAA1875	NP_115918.1	ILMN_1789500	0001510731	S	5128	TGGGGCCTGTCATTGGTATTTGGCCAAGGCCTGCATCGGGAATAAAGTCC	8	+	145243215-145243264	8q24.3g	Homo sapiens KIAA1875 (KIAA1875), mRNA.					
Homo sapiens	RefSeq	NM_015833.2	ILMN_29891	ADARB1	NM_015833.2	NM_015833.2		104	75709170	NM_015833.2	ADARB1	NP_056648.1	ILMN_2319326	0004760079	A	4313	CCGTGTGTGTCCAGTTTACAGCGTCTCTGCCCCCTAGCGTGTTTTGTGAC	21	+	45470183-45470232	21q22.3e	Homo sapiens adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) (ADARB1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8995285] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 9149227] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [pmid 9149227] [evidence IC ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9111310] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 8995285] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 8995285] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 9149227] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 9149227] [evidence IC ]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADAR2a; ADAR2; DRABA2; DRADA2; ADAR2a-L1; ADAR2a-L2; ADAR2g; ADAR2c; RED1; ADAR2a-L3; ADAR2b; ADAR2d	ADAR2a; ADAR2; DRABA2; DRADA2; ADAR2a-L1; ADAR2a-L2; ADAR2g; ADAR2c; RED1; ADAR2a-L3; ADAR2b; ADAR2d
Homo sapiens	RefSeq	XM_943070.1	ILMN_46632	KIAA1109	XM_943070.1	XM_943070.1		84162	88981059	XM_943070.1	KIAA1109	XP_948163.1	ILMN_1694357	0002650017	I	4518	GACAAGTTGTAACACTGTAGTTGTGTGTTGCTTGTGCCTTTTCAGACATG				4q27d	PREDICTED: Homo sapiens KIAA1109, transcript variant 14 (KIAA1109), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_007050.4	ILMN_29097	PTPRT	NM_007050.4	NM_007050.4		11122	48762923	NM_007050.4	PTPRT	NP_008981.3	ILMN_2404256	0005220114	A	11916	CTCCAGAGGTTATTTCTACCCCACTCCCTATTCAAGGCCTGTTGGAGCAC	20	-	40135486-40135535	20q12d-q13.11a	Homo sapiens protein tyrosine phosphatase, receptor type, T (PTPRT), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9602027] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9602027] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 9486824] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5001] [pmid 9486824] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16273344] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RPTPrho; KIAA0283	RPTPrho; KIAA0283
Homo sapiens	Unigene	Hs.582055	ILMN_134236	HS.582055	Hs.582055		Hs.582055		7038858	AW468752			ILMN_1899601	0003610497	S	186	GGCTAATTTGGTTGCCTGTCAGAAGGGAGGAGAAGCAAGTAGCGAGGGGC	4	-	89967047-89967091:89985593-89985597		hd27e07.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2910756 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020549.2	ILMN_3530	CHAT	NM_020549.3	NM_020549.3		1103	119433674	NM_020549.3	CHAT	NP_065574.2	ILMN_1768856	0000650239	I	67	GTTCTGTGCCCCCTTCTAGAGCCTAAATTTGTTGCCCGAGTTCCTCCGGG	10	+	50492128-50492177	10q11.23a	Homo sapiens choline acetyltransferase (CHAT), transcript variant M, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10861222] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10861222] [evidence TAS]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; The biological process by which a synapse between a motor neuron and a muscle is initially formed [goid 7529] [evidence IEA]; The specific actions or reactions of an organism that recur with measured regularity [goid 7622] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; Any process involved in the generation of rhythmic, synchronous excitatory synaptic inputs in a neural circuit [goid 43179] [evidence IEA]	Catalysis of the reaction: acetyl-CoA + choline = CoA + O-acetylcholine [goid 4102] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CMS1A2; CMS1A	CMS1A2; CMS1A
Homo sapiens	RefSeq	NM_003289.3	ILMN_22618	TPM2	NM_213674.1	NM_213674.1		7169	47519615	NM_213674.1	TPM2	NP_998839.1	ILMN_1757604	0003390128	A	916	AACTGTTGGAGGAGAAGCTGAAGGAGGCTGAGACCCGAGCAGAGTTTGCC	9	-	35684288-35684312:35684485-35684509	9p13.3a	Homo sapiens tropomyosin 2 (beta) (TPM2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments [goid 5862] [pmid 7606936] [evidence TAS]	Any process that modulates the rate of ATP hydrolysis by an ATPase [goid 43462] [pmid 17194691] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 17194691] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 7606936] [evidence TAS]	AMCD1; TMSB; DA1	AMCD1; DA1; TMSB
Homo sapiens	RefSeq	NM_213674.1	ILMN_22618	TPM2	NM_213674.1	NM_213674.1		7169	47519615	NM_213674.1	TPM2	NP_998839.1	ILMN_1789196	0000160370	I	1049	TCACCAGACCTTGGACCAGACCCTGCTGGAACTCAACAACCTGTGAGGGC	9	-	35682073-35682077:35682078-35682122	9p13.3a	Homo sapiens tropomyosin 2 (beta) (TPM2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments [goid 5862] [pmid 7606936] [evidence TAS]	Any process that modulates the rate of ATP hydrolysis by an ATPase [goid 43462] [pmid 17194691] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 17194691] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 7606936] [evidence TAS]	AMCD1; TMSB; DA1	AMCD1; DA1; TMSB
Homo sapiens	RefSeq	NM_018080.2	ILMN_6453	VPS13C	NM_017684.3	NM_017684.3		54832	42544120	NM_017684.3	VPS13C	NP_060154.3	ILMN_1809582	0001070181	A	10708	CTGAGGAAGTATCTAGCCTCCGTCCCCCTCGCCTGATCCATGAAGATGGC	15	-	62160908-62160957	15q22.2b	Homo sapiens vacuolar protein sorting 13 homolog C (S. cerevisiae) (VPS13C), transcript variant 1A, mRNA.		Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		DKFZp686E0570; FLJ21361	DKFZp686E0570; FLJ21361
Homo sapiens	RefSeq	NM_032333.2	ILMN_17906	C10ORF58	NM_032333.4	NM_032333.4		84293	148596958	NM_032333.4	C10orf58	NP_115709.3	ILMN_1754538	0005960168	S	849	GATTGTGTGAAACTGCCCAGCTCAGGGATAACCAGGGACATTCACCTGTG	10	+	82177187-82177232:82180222-82180223:82180224-82180225	10q23.1a	Homo sapiens chromosome 10 open reading frame 58 (C10orf58), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]			MGC4248	MGC4248
Homo sapiens	RefSeq	XM_932850.1	ILMN_31446	LOC645363	XM_932850.1	XM_932850.1		645363	89031342	XM_932850.1	LOC645363	XP_937943.1	ILMN_1787480	0000620348	S	281	GCCCGAACTGCGGGCGCCGAGTCAGGCAGCGACGGGGCGCGCCCGGCGCG	10	-	71908718-71908767		PREDICTED: Homo sapiens hypothetical protein LOC645363 (LOC645363), mRNA.					
Homo sapiens	RefSeq	XM_001719315.1	ILMN_348126	LOC100132900	XM_001719315.1	XM_001719315.1		100132900	169215497	XM_001719315.1	LOC100132900	XP_001719367.1	ILMN_3246102	0003780040	S	105	GTCCGATGGGGCTACTTTAGTCCAGAACAATCACAGTGTGGTGTCAGCAC	22	-	17162289-17162304:17210806-17210839	22q11.21b	PREDICTED: Homo sapiens similar to immunoglobulin superfamily, member 3 (LOC100132900), mRNA.					
Homo sapiens	RefSeq	NM_001017.2	ILMN_20798	RPS13	NM_001017.2	NM_001017.2		6207	14591910	NM_001017.2	RPS13	NP_001008.1	ILMN_1777344	0003120717	S	152	GGCCAAGAAGGGCCTTACTCCTTCACAGATCGGTGTAATCCTGAGAGATT	11	-	17097152-17097170:17098715-17098745	11p15.1e	Homo sapiens ribosomal protein S13 (RPS13), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17881366] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 17881366] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 8332508] [evidence NAS]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 8706699] [evidence IDA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of RNA splicing [goid 33119] [pmid 17881366] [evidence IDA]	Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 17881366] [evidence IDA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12054647] [evidence IPI]		
Homo sapiens	RefSeq	NM_014567.2	ILMN_2703	BCAR1	NM_014567.2	NM_014567.2		9564	44662835	NM_014567.2	BCAR1	NP_055382.2	ILMN_1672596	0002710746	S	2839	CAGCTCTGCGTCGGTCCTGGTGCCCTGGATGCCCAGGAATCTGTATATAT	16	-	75263256-75263305	16q23.1a	Homo sapiens breast cancer anti-estrogen resistance 1 (BCAR1), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence ISS]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence ISS]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 9472046] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8070403] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8070403] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence ISS]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence ISS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence ISS]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence ISS]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence ISS]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence ISS]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence ISS]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence ISS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence ISS]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence ISS]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence ISS]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence ISS]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 11607844] [evidence TAS]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [pmid 16105984] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10092204] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence ISS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 8649368] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10639512] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 9472046] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 11607844] [evidence TAS]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence ISS]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence ISS]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [pmid 9295052] [evidence NAS]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [pmid 9020138] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [pmid 10675905] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9748234] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10339567] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10587647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11782456] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14688263] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16105984] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8649368] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 10026197] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 16245368] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9020138] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8070403] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9020138] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9472046] [evidence IPI]; Interacting selectively with any protein phosphatase [goid 19903] [pmid 9285683] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10587647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11782456] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10339567] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9748234] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14688263] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16105984] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9472046] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 16245368] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 10026197] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8070403] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8649368] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9020138] [evidence IPI]; Interacting selectively with any protein phosphatase [goid 19903] [pmid 9285683] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8070403] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10587647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10339567] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9748234] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14688263] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10587647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16105984] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11782456] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8070403] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 16245368] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9020138] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 10026197] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8649368] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9472046] [evidence IPI]; Interacting selectively with any protein phosphatase [goid 19903] [pmid 9285683] [evidence IPI]	P130Cas; CRKAS; CAS	P130Cas; CRKAS; CAS
Homo sapiens	RefSeq	NM_000307.1	ILMN_165590	POU3F4	NM_000307.2	NM_000307.2		5456	110624762	NM_000307.2	POU3F4	NP_000298.2	ILMN_1738003	0003190639	S	1047	GAAAAGAATGACTCCGCCAGGGGATCAGCAGCCGCATGAGGTTTATTCGC	X	+	82650987-82651036	Xq21.1d	Homo sapiens POU class 3 homeobox 4 (POU3F4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 7839145] [evidence TAS]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7839145] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	BRN4; OTF9; BRAIN-4; DFN3	BRN4; OTF9; BRAIN-4; DFN3
Homo sapiens	RefSeq	NM_181677.1	ILMN_17795	PPP2R2B	NM_181677.1	NM_181677.1		5521	32307118	NM_181677.1	PPP2R2B	NP_858063.1	ILMN_2298365	0000620369	I	231	CTTCTGCCATGATTGTAAGTTTCCTGAGACCTCCCCAGCCATGCAGAACT	5	-	146060898-146060898:146394925-146394934:146394935-146394973	5q32d-q32e	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B, beta isoform (PPP2R2B), transcript variant 5, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 1849734] [evidence TAS]	PR2AB-BETA; PR52B; PR2APR55-BETA; PR2AB55-BETA; MGC24888; PR55-BETA; PP2A-PR55B; SCA12	PR2AB-BETA; PR52B; PR2APR55-BETA; PR2AB55-BETA; MGC24888; PR55-BETA; PP2A-PR55B; SCA12
Homo sapiens	RefSeq	NM_016533.4	ILMN_6659	NINJ2	NM_016533.4	NM_016533.4		4815	39725945	NM_016533.4	NINJ2	NP_057617.2	ILMN_1731745	0006860278	S	937	AGGCCAAGTCTGCCCGGCTTAAGGATGCTGGTTCTGACTCTACCCCACTG	12	-	673537-673586	12p13.33d	Homo sapiens ninjurin 2 (NINJ2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10627596] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a neuron to another cell via adhesion molecules [goid 7158] [pmid 10627596] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10627596] [evidence TAS]; The regrowth of lost or destroyed tissues [goid 42246] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The regrowth of lost or destroyed tissues [goid 42246] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_022349.2	ILMN_2009	MS4A6A	NM_022349.2	NM_022349.2		64231	23238233	NM_022349.2	MS4A6A	NP_071744.2	ILMN_1797731	0002260129	I	1191	GCTATGAGTTTGTGCCTTTGCTGAGGACACTAGAACCTGGCTTGCCTCCC	11	-	59940149-59940198	11q12.1d-q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 6A (MS4A6A), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CDA01; MSTP090; MGC22650; 4SPAN3; 4SPAN3.2; MS4A6; CD20L3; MST090; MGC131944	CDA01; MSTP090; MGC22650; 4SPAN3; 4SPAN3.2; MS4A6; CD20L3; MST090; MGC131944
Homo sapiens	RefSeq	NM_003728.2	ILMN_7179	UNC5C	NM_003728.2	NM_003728.2		8633	16933524	NM_003728.2	UNC5C	NP_003719.2	ILMN_1687875	0000520632	S	3056	CACAGGCAAGAATGCAGCAGGAGCCAGAAGGAAAACAGATACAACTGCCC	4	-	96309530-96309573:96310328-96310333	4q22.3a-q22.3b	Homo sapiens unc-5 homolog C (C. elegans) (UNC5C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9126742] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 9782087] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A transmembrane receptor activity that responds to the netrin family of ligands and results in chemotaxis when activated [goid 5042] [pmid 9782087] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	UNC5H3	UNC5H3
Homo sapiens	RefSeq	XM_370975.3	ILMN_35481	LOC388259	XM_370975.3	XM_370975.3		388259	89040306	XM_370975.3	LOC388259	XP_370975.3	ILMN_1764967	0000870068	S	24	GGAGCATCAGCAAAATGGCAGTGGAGACAGCTGCAATCTTTCATTTCTCC	16	+	32972478-32972527	16p11.2b	PREDICTED: Homo sapiens similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (LOC388259), mRNA.					
Homo sapiens	RefSeq	NM_017691.2	ILMN_20074	LRRC49	NM_017691.2	NM_017691.2		54839	55743113	NM_017691.2	LRRC49	NP_060161.2	ILMN_1763941	0007380445	S	2557	GGCGTGGCACTGCATCCTTGGTTCTTGCTTTGATTGGTGCCCTGCTATAG	15	+	69129254-69129303	15q23b	Homo sapiens leucine rich repeat containing 49 (LRRC49), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ20156	FLJ20156
Homo sapiens	RefSeq	NM_006257.2	ILMN_22905	PRKCQ	NM_006257.2	NM_006257.2		5588	48255887	NM_006257.2	PRKCQ	NP_006248.1	ILMN_1733421	0004640576	S	2919	CCATCCACCCATTCTCAGCAGACTCCAGTATTGGCACAGTCACTCACTGC	10	-	6523996-6524045	10p15.1a	Homo sapiens protein kinase C, theta (PRKCQ), mRNA.	An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 15790681] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 8444877] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 7686153] [evidence NAS]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10636891] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11788586] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10383400] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17588663] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]	MGC141919; PRKCT; MGC126514; nPKC-theta	MGC141919; PRKCT; MGC126514; nPKC-theta
Homo sapiens	RefSeq	XM_932678.1	ILMN_37989	LOC387841	XM_932678.1	XM_932678.1		387841	89035372	XM_932678.1	LOC387841	XP_937771.1	ILMN_1674983	0001940296	A	465	CATCTCTAACCAATCAGCACTCCTGGCTCACTGGCTTCCCCTCATCTGCC	12	+	12920501-12920550	12p13.1b	PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 2 (LOC387841), mRNA.					
Homo sapiens	RefSeq	Hs.577832	ILMN_163154	LOC731227	XM_001128884.1	XM_001128884.1		731227	113424462	XM_001128884.1	LOC731227	XP_001128884.1	ILMN_1877620	0006250673	S	510	CCACAGAAGCAAAACACACCCACACTCCCAGGAAGGAGGCGGCAAAGGAC					PREDICTED: Homo sapiens hypothetical LOC731227 (LOC731227), mRNA.					
Homo sapiens	RefSeq	NM_181538.1	ILMN_22243	GJC3	NM_181538.1	NM_181538.1		349149	31559820	NM_181538.1	GJC3	NP_853516.1	ILMN_1757629	0004290241	S	617	CTTTTTTGGAGCTTGTGCTTCTGGGTTTGGGGAGATGGTGGAGGACCTGG	7	-	99526577-99526626	7q22.1b	Homo sapiens gap junction protein, gamma 3, 30.2kDa (GJC3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]		Cx29; GJE1; CX30.2	Cx29; GJE1; CX30.2
Homo sapiens	RefSeq	XM_937654.1	ILMN_34814	KIAA1530	XM_937654.2	XM_937654.2		57654	113415932	XM_937654.2	KIAA1530	XP_942747.2	ILMN_1728490	0002470593	A	1015	AACCTGAAGGCTCAGGCTGATACCGCCCGCGCTCGCATTGGGAGAAAAGT				4p16.3c	PREDICTED: Homo sapiens KIAA1530 protein (KIAA1530), mRNA.					
Homo sapiens	RefSeq	XM_937654.1	ILMN_34814	KIAA1530	XM_937654.2	XM_937654.2		57654	113415932	XM_937654.2	KIAA1530	XP_942747.2	ILMN_1677695	0000990689	I	836	AGGGCGGGGGTGGGTTGCAGCCTGATGCCCAGAGGCAGCAGCTCAGCCCT				4p16.3c	PREDICTED: Homo sapiens KIAA1530 protein (KIAA1530), mRNA.					
Homo sapiens	RefSeq	NM_020894.1	ILMN_34814	KIAA1530	XM_937654.2	XM_937654.2		57654	113415932	XM_937654.2	KIAA1530	XP_942747.2	ILMN_1729827	0006060161	A	898	GAATGGCAGGACCCTGAGTTGATGAGAGACGTGGAAGCAGCCACAGGGCA				4p16.3c	PREDICTED: Homo sapiens KIAA1530 protein (KIAA1530), mRNA.					MGC117169
Homo sapiens	RefSeq	XM_497491.2	ILMN_33537	LOC441752	XM_497491.2	XM_497491.2		441752	89040251	XM_497491.2	LOC441752	XP_497491.2	ILMN_1799920	0004780424	S	396	CAGCAAAAGCAGTTTCAGGCTGGGTGAGTGCATGGAGAGCTTCAAGGACG	16	-	28619471-28619493:28620011-28620037		PREDICTED: Homo sapiens similar to Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein kinase-targeting subunit) (p50Cdc37) (LOC441752), mRNA.					
Homo sapiens	RefSeq	XR_018409.2	ILMN_165012	LOC401533	XR_018409.2	XR_018409.2		401533	169178995	XR_018409.2	LOC401533		ILMN_3219969	0000380142	A	1801	GCACAGACTGGCTAATGATACTAGTGATGAAGAACAGGAGGAAGAGGAAG				9q21.32a	PREDICTED: Homo sapiens misc_RNA (LOC401533), miscRNA.					
Homo sapiens	RefSeq	NM_014336.3	ILMN_177867	AIPL1	NM_014336.3	NM_014336.3		23746	74272275	NM_014336.3	AIPL1	NP_055151.3	ILMN_2368268	0000240142	A	2785	AGCTTGTCTCCACCCAGCAGGGGTTCCCCCAGCGCTAACTGTATCCCTAA	17	-	6327195-6327244	17p13.2a	Homo sapiens aryl hydrocarbon receptor interacting protein-like 1 (AIPL1), transcript variant 1, mRNA.	The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12374762] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12374762] [evidence IDA]; The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IEA]	A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function [goid 1895] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10615133] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 7603] [evidence IEA]; The enzymatic addition of a farnesyl moiety to a protein as a posttranslational modification [goid 18343] [pmid 14555765] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cGMP [goid 30823] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A tissue homeostatic process involved in the maintenance of an internal equilibrium within the retina of the eye, including control of cellular proliferation and death and control of metabolic function [goid 1895] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 7603] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cGMP [goid 30823] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]	Interacting selectively with a farnesylated protein [goid 1918] [pmid 14555765] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 10615133] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AIPL2; LCA4	AIPL2; LCA4
Homo sapiens	RefSeq	XM_941654.1	ILMN_308966	KIAA1949	NM_133471.1	NM_133471.1		170954	145386516	NM_133471.1	KIAA1949	NP_597728.1	ILMN_1732967	0007560037	A	2575	GCCACGCTTACTTGCTGTGTCTGCGTGGAATTCTCTCCTCTGTCCCCTCC	6	-	30752431-30752480	6p21.33b	Homo sapiens KIAA1949 (KIAA1949), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	HKMT1098	
Homo sapiens	RefSeq	NM_181679.1	ILMN_29561	NFS1	NM_021100.3	NM_021100.3		9054	32307131	NM_021100.3	NFS1	NP_066923.3	ILMN_1761314	0004280437	A	348	ATGGCTGGGAGAGTGAGGCAGCCATGGAACGTGCTCGTCAGCAAGTAGCA	20	-	34284373-34284382:34285606-34285645	20q11.22b	Homo sapiens NFS1 nitrogen fixation 1 homolog (S. cerevisiae) (NFS1), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16847322] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9885568] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 16847322] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16527810] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9885568] [evidence TAS]; The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid [goid 6534] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The incorporation of iron into a metallo-sulfur cluster [goid 18283] [pmid 16847322] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16527810] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine [goid 31071] [pmid 16527810] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16527810] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	IscS; NIFS; HUSSY-08	NIFS; HUSSY-08
Homo sapiens	RefSeq	NM_021100.3	ILMN_29561	NFS1	NM_021100.3	NM_021100.3		9054	32307131	NM_021100.3	NFS1	NP_066923.3	ILMN_1703079	0000070369	I	2114	GGTTGAGGGAAAAGTGGAAGCTGTACTTGGGAATTGTGGAGAAGACCGCC	20	-	34256818-34256867	20q11.22b	Homo sapiens NFS1 nitrogen fixation 1 homolog (S. cerevisiae) (NFS1), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16847322] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9885568] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 16847322] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16527810] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9885568] [evidence TAS]; The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid [goid 6534] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The incorporation of iron into a metallo-sulfur cluster [goid 18283] [pmid 16847322] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16527810] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine [goid 31071] [pmid 16527810] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16527810] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	IscS; NIFS; HUSSY-08	NIFS; HUSSY-08; IscS
Homo sapiens	RefSeq	XM_001725807.1	ILMN_346325	LOC100130771	XM_001725807.1	XM_001725807.1		100130771	169171106	XM_001725807.1	LOC100130771	XP_001725859.1	ILMN_3266027	0003890184	M	265	AGGCAGAGGCACCATATCATTTGTGCAGTATAAAGAAGCCCTAAAAACCC	7	-	104996961-104996973:104997090-104997126	7q22.2b	PREDICTED: Homo sapiens similar to hCG1779729, transcript variant 1 (LOC100130771), mRNA.					
Homo sapiens	RefSeq	NM_006169.2	ILMN_22529	NNMT	NM_006169.2	NM_006169.2		4837	62953139	NM_006169.2	NNMT	NP_006160.1	ILMN_1715508	0002940746	S	1110	CAAGGGTCCAGAGAAGGAGGAGAAGTTGAGACAGGCGGTCAAGCAGGTGC	11	+	113687980-113688029	11q23.2b	Homo sapiens nicotinamide N-methyltransferase (NNMT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the reaction: S-adenosyl-L-methionine + nicotinamide = S-adenosyl-L-homocysteine + 1-methylnicotinamide [goid 8112] [pmid 8182091] [evidence TAS]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_175856.4	ILMN_27324	CHSY3	NM_175856.4	NM_175856.4		337876	74271902	NM_175856.4	CHSY3	NP_787052.3	ILMN_1740407	0004250328	S	3234	TGAGGAGTTTTGTTCCACAAGCAACCGGTACTGGCTACCCTGGTCTTATG	5	+	129520983-129521032	5q23.3c	Homo sapiens chondroitin sulfate synthase 3 (CHSY3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP [goid 47238] [evidence IEA]; Catalysis of the reaction: N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,3)-N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50510] [evidence IEA]	CSS3; CHSY2	CSS3; CHSY2
Homo sapiens	RefSeq	NM_001033506.1	ILMN_27049	CSTF3	NM_001033506.1	NM_001033506.1		1479	75709188	NM_001033506.1	CSTF3	NP_001028678.1	ILMN_1806951	0001010367	I	309	GGATTACATTTCCTTCTCTATGGGTCCAATCACACTACTTGGTTCTGCAG	11	-	33163367-33163416	11p13d	Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa (CSTF3), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7984242] [evidence TAS]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [pmid 7984242] [evidence TAS]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 7984242] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1741396] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC75122; MGC43001; MGC117398; CSTF-77	MGC75122; MGC43001; MGC117398; CSTF-77
Homo sapiens	RefSeq	NM_017829.5	ILMN_25032	CECR5	NM_033070.2	NM_033070.2		27440	51093855	NM_033070.2	CECR5	NP_149061.1	ILMN_1654690	0001340470	A	1663	CCGGCACTGAAGGCATGCAGCCTGTCGGCAGAGTGTCTTAACACCAGATG	22	-	17618498-17618547	22q11.1d	Homo sapiens cat eye syndrome chromosome region, candidate 5 (CECR5), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_000526.3	ILMN_9209	KRT14	NM_000526.3	NM_000526.3		3861	15431309	NM_000526.3	KRT14	NP_000517.2	ILMN_1665035	0004900458	S	1519	GTGGACACAGATCCCACTGGAAGATCCCCTCTCCTGCCCAAGCACTTCAC	17	-	36992124-36992173	17q21.2b	Homo sapiens keratin 14 (epidermolysis bullosa simplex, Dowling-Meara, Koebner) (KRT14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11724817] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11724817] [evidence IDA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [pmid 7679677] [evidence IDA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 7525408] [evidence TAS]; The formation of the bundles of intermediate filaments, known as tonofilaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs [goid 45110] [pmid 11724817] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 7525408] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11684708] [evidence IPI]	NFJ; CK14; EBS3; EBS4; K14	NFJ; CK14; EBS3; EBS4; K14
Homo sapiens	RefSeq	NM_001130448.1	ILMN_366616	C15ORF62	NM_001130448.1	NM_001130448.1		643338	194394171	NM_001130448.1	C15orf62	NP_001123920.1	ILMN_3248556	0001050487	S	2322	CCGGGACTCGCTAAGAGTAGCAAAGGGGAGAGGGAAGCTCTGACACACAC				15q15.1b	Homo sapiens chromosome 15 open reading frame 62 (C15orf62), nuclear gene encoding mitochondrial protein, mRNA.					
Homo sapiens	RefSeq	XR_040492.1	ILMN_338752	LOC440386	XR_040492.1	XR_040492.1		440386	169210010	XR_040492.1	LOC440386		ILMN_3249902	0006760093	A	924	GTGGACTGCCGGTCACAAGGAAGACTGGATGAGCGTGGGTTCACACATTT	16	+	72958263-72958312	16q22.3c	PREDICTED: Homo sapiens hypothetical LOC440386 (LOC440386), miscRNA.					
Homo sapiens	RefSeq	XR_040492.1	ILMN_338752	LOC440386	XR_040492.1	XR_040492.1		440386	169210010	XR_040492.1	LOC440386		ILMN_3250752	0003420215	M	1447	GAAATTAACACAAGTCCCTGCCACTGGAAACGCATATCCGTTGGGCTGGC	16	+	72958786-72958835	16q22.3c	PREDICTED: Homo sapiens hypothetical LOC440386 (LOC440386), miscRNA.					
Homo sapiens	RefSeq	XM_928035.1	ILMN_40630	LOC644951	XM_928035.1	XM_928035.1		644951	89029839	XM_928035.1	LOC644951	XP_933128.1	ILMN_1657812	0007200458	S	61	AGTAAGGTCACATTCACAGGACTGAGGGTTAGGACTTCAGTATAACTTTC	9	-	73366404-73366453		PREDICTED: Homo sapiens hypothetical protein LOC644951 (LOC644951), mRNA.					
Homo sapiens	Unigene	Hs.516721	ILMN_99097	HS.516721	Hs.516721		Hs.516721		51460939	XM_374023			ILMN_1846242	0006450170	S	800	GGATGGATACTGGGGGAGCACTAGCAGTGGGTTCAGCAAGGAACTAGGAG					PREDICTED: Homo sapiens hypothetical LOC389071 (LOC389071), mRNA					
Homo sapiens	RefSeq	NM_014762.2	ILMN_173913	DHCR24	NM_014762.3	NM_014762.3		1718	114155130	NM_014762.3	DHCR24	NP_055577.1	ILMN_1725510	0004480341	S	4069	CTTGGATATTACTGAAAGGGAGGGGTGGAGATGGGTGTGGCAGTGTATGG	1	-	55315467-55315516	1p32.3b	Homo sapiens 24-dehydrocholesterol reductase (DHCR24), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15577914] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11007892] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11007892] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11519011] [evidence EXP]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence ISS]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [pmid 11519011] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11007892] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 15688385] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 11007892] [evidence IEP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 15577914] [evidence NAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [pmid 12457401] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IEA]; The process whereby plasminogen is processed to plasmin. This process includes both the cleavage of plasminogen between Arg560-Val561 to form plasmin and cleavage at Arg310 by plasmin or trypsin to result in the final two-chain form of plasmin held together by disulfide bonds [goid 31639] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 11007892] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [pmid 16407971] [evidence NAS]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 15577914] [evidence IPI]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [pmid 15577914] [evidence IPI]; Catalysis of the reaction: NADP+ + 5-alpha-cholest-7-en-3-beta-ol = NADPH + H+ + 5-alpha-cholesta-7,24-dien-3-beta-ol [goid 50614] [pmid 11519011] [evidence EXP]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	Nbla03646; seladin-1; SELADIN1; KIAA0018	seladin-1; SELADIN1; KIAA0018; Nbla03646
Homo sapiens	RefSeq	XR_041634.1	ILMN_337363	DIPAS	XR_041634.1	XR_041634.1		493913	169179305	XR_041634.1	DIPAS		ILMN_3179275	0001050368	A	185	ACAGCAAAATATGTCTGAGTATTTAAAACTGTATAGAAAAAATAAATTAG				9q33.1b	PREDICTED: Homo sapiens misc_RNA (DIPAS), miscRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.116129	ILMN_75330	HS.116129	Hs.116129		Hs.116129		27878970	BX112697			ILMN_1903670	0000060110	S	482	GCAATGTTTCCATGCTGAGAGGGCTCCAGAGAGATGTAGGGAAGCTCTGC	10	-	87181795-87181844		BX112697 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998A091831, mRNA sequence					
Homo sapiens	RefSeq	XM_935679.1	ILMN_44335	LOC641926	XM_935679.1	XM_935679.1		641926	89026791	XM_935679.1	LOC641926	XP_940772.1	ILMN_1661032	0004590348	S	160	GGTGTACAACCCCCGCGATATGGCCAGGAGAGAGGGCATGATATTCGTTT					PREDICTED: Homo sapiens hypothetical protein LOC641926 (LOC641926), mRNA.					
Homo sapiens	RefSeq	NM_001042507.3	ILMN_365506	LGALS7B	NM_001042507.3	NM_001042507.3		653499	194688137	NM_001042507.3	LGALS7B	NP_001035972.1	ILMN_3243690	0005810707	S	45	CTGCCCGAGGGCATCCGCCCTGGCACGGTGCTGAGAATTCGCGGCTTGGT	19	+	39280277-39280326	19q13.2a	Homo sapiens lectin, galactoside-binding, soluble, 7B (LGALS7B), mRNA.					
Homo sapiens	RefSeq	NM_032993.1	ILMN_137056	NOLA1	NM_032993.1	NM_032993.1		54433	15011915	NM_032993.1	NOLA1	NP_127460.1	ILMN_1749752	0004120465	A	489	CCCATATAAGCTGCTGCCACTGCAGAGGTTTTTACCTCGACCTCCAGGTG	4	+	110962963-110963012	4q25c	Homo sapiens nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) (NOLA1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [pmid 8766832] [evidence TAS]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]	GAR1	GAR1
Homo sapiens	Unigene	Hs.541587	ILMN_105806	HS.541587	Hs.541587		Hs.541587		3400117	AI073473			ILMN_1858247	0002320397	S	276	GGACGATGGAAGCTGTGCATTTTCAGTTCTTTCTCTCACAGACGATCCAG	2	+	191364268-191364317		ov45b04.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1640239 3, mRNA sequence					
Homo sapiens	RefSeq	XM_944981.1	ILMN_33386	LOC651864	XM_944981.1	XM_944981.1		651864	88999112	XM_944981.1	LOC651864	XP_950074.1	ILMN_1718358	0000010114	S	301	TCCCACTCTCAGGATTCTTTCCTGAACCCCAAGAATCCCCTCCCGGACTC					PREDICTED: Homo sapiens hypothetical protein LOC651864 (LOC651864), mRNA.					
Homo sapiens	Unigene	Hs.128396	ILMN_76633	HS.128396	Hs.128396		Hs.128396		27836698	BX110880			ILMN_1903900	0006060022	S	103	TCTGCATATCTCACTGGCCTGAAGCCTACCCTCTGACCCAAAAGGGTCTG	X	-	102629588-102629637		BX110880 NCI_CGAP_Gas4 Homo sapiens cDNA clone IMAGp998F095404, mRNA sequence					
Homo sapiens	RefSeq	XM_495939.2	ILMN_40920	KIAA1545	XM_495939.3	XM_495939.3		57666	113423571	XM_495939.3	KIAA1545	XP_495939.3	ILMN_1760305	0000870736	A	4139	CACTGCTGTGTGTTTTCTTCCGCCTGAGGCATCAGCGTCACCTCGGTGTG	12	+	131671516-131671565	12q24.33d	PREDICTED: Homo sapiens KIAA1545 protein (KIAA1545), mRNA.					
Homo sapiens	RefSeq	NM_012287.4	ILMN_363925	ACAP2	NM_012287.4	NM_012287.4		23527	187608515	NM_012287.4	ACAP2	NP_036419.3	ILMN_3236270	0004280026	S	5976	GGAAGGAGCACTGGACTAGTCGTCACTACCCTTTTTGGATTCAGGGCTCC	3	-	194996609-194996658	3q29e	Homo sapiens ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 (ACAP2), mRNA.					
Homo sapiens	RefSeq	NM_001003684.1	ILMN_3323	UCRC	NM_001003684.1	NM_001003684.1		29796	51173875	NM_001003684.1	UCRC	NP_001003684.1	ILMN_1781986	0006130332	I	189	CTGTGCCATCCCTGACCTTGGACCCGCCTGAGGGGTGACAGTGGAGTAGA	22	+	28493546-28493576:28493577-28493595	22q12.2a	Homo sapiens ubiquinol-cytochrome c reductase complex (7.2 kD) (UCRC), transcript variant 2, mRNA.				HSPC151; HSPC051; HSPC119	HSPC151; HSPC051; HSPC119
Homo sapiens	RefSeq	NM_004881.2	ILMN_21366	TP53I3	NM_004881.2	NM_004881.2		9540	22538443	NM_004881.2	TP53I3	NP_004872.2	ILMN_1651967	0004640341	I	233	GCATCCAGCCCTGTACCGCCATCCCACTTCCCGCCGTTCCCATCTGTGTT	2	-	24307446-24307495	2p23.3d	Homo sapiens tumor protein p53 inducible protein 3 (TP53I3), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	PIG3	PIG3
Homo sapiens	RefSeq	NM_022728.2	ILMN_24121	NEUROD6	NM_022728.2	NM_022728.2		63974	27475984	NM_022728.2	NEUROD6	NP_073565.2	ILMN_1722559	0004730278	S	1202	AAATTACAATTACGGCATGCATTACTGTGCAGTGCCACCCAGGGGTCCCC	7	-	31377984-31378033	7p15.1a	Homo sapiens neurogenic differentiation 6 (NEUROD6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MATH2; Math-2; NEX1M; Atoh2	MATH2; Math-2; NEX1M; Atoh2
Homo sapiens	RefSeq	XM_939075.1	ILMN_169660	LOC731396	XM_001129472.1	XM_001129472.1		731396	113425606	XM_001129472.1	LOC731396	XP_001129472.1	ILMN_1671721	0004880601	S	221	GTCTGCAACCCAGATTGCAGAGATGGAGCTCTCAGACTTTGAGGACTGCC					PREDICTED: Homo sapiens similar to stereocilin (LOC731396), mRNA.					
Homo sapiens	RefSeq	NM_024570.1	ILMN_20578	RNASEH2B	NM_024570.1	NM_024570.1		79621	13375741	NM_024570.1	RNASEH2B	NP_078846.1	ILMN_1782488	0000620450	S	1116	GCAAAATGACTGCAGCTCAGAAGGCTTTGGCTAAAGTTGACAAGAGTGGA	13	+	50428502-50428551	13q14.3b	Homo sapiens ribonuclease H2, subunit B (RNASEH2B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			DLEU8; AGS2; FLJ11712	DLEU8; AGS2; FLJ11712
Homo sapiens	RefSeq	NM_016937.1	ILMN_10362	POLA	NM_016937.1	NM_016937.1		5422	8393994	NM_016937.1	POLA	NP_058633.1	ILMN_1725145	0001010619	S	4710	TGGATTGAGAGTAGCTGGAATGTAAGTGACCCCAGGCTTTGCTCAGGGCC	X	+	24924294-24924343	Xp22.11a-p21.3d	Homo sapiens polymerase (DNA directed), alpha (POLA), mRNA.					
Homo sapiens	RefSeq	XR_018264.2	ILMN_177486	LOC400403	XR_018264.2	XR_018264.2		400403	169209259	XR_018264.2	LOC400403		ILMN_3232377	0001030465	I	5589	TAGTGCTTGGTGGGGGATGGAGTTGGAAGTGAAGCAGCTGCTGGGCCTGT				15q24.3b	PREDICTED: Homo sapiens misc_RNA (LOC400403), miscRNA.					
Homo sapiens	RefSeq	NM_001009937.1	ILMN_15004	SLC25A26	NM_001009937.1	NM_001009937.1		115286	58036486	NM_001009937.1	SLC25A26	NP_001009937.1	ILMN_1750981	0001850458	A	761	GGCGGTCACAGGGGCTGGCAGGATTATTTGCAGGTGTCTTCCCTCGAATG	3	+	66511046-66511095	3p14.1c	Homo sapiens solute carrier family 25, member 26 (SLC25A26), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 14674884] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism, into, out of, within or between cells [goid 15805] [pmid 14674884] [evidence IMP]	Catalysis of the transfer of S-adenosylmethionine from one side of a membrane to the other. S-adenosylmethionine is S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism [goid 95] [pmid 14674884] [evidence IMP]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	SAMC	SAMC
Homo sapiens	RefSeq	NM_005128.2	ILMN_164626	DOPEY2	NM_005128.2	NM_005128.2		9980	45827700	NM_005128.2	DOPEY2	NP_005119.2	ILMN_2180239	0005080328	S	7331	GAGCCGAGATCACGACACTGCACTCCAGCTGTGTGACAGAATGAGACCAT	21	+	36588094-36588143	21q22.12b	Homo sapiens dopey family member 2 (DOPEY2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 16301316] [evidence ISS]	The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [pmid 16301316] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [pmid 16301316] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10950924] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C21orf5	C21orf5
Homo sapiens	RefSeq	NM_005128.2	ILMN_164626	DOPEY2	NM_005128.2	NM_005128.2		9980	45827700	NM_005128.2	DOPEY2	NP_005119.2	ILMN_1741711	0001450451	S	6856	GCTGCCTGCTGATAGCCCAGGAACTCCATTCTTGGACTTTCCTGTCACAG	21	+	36587619-36587668	21q22.12b	Homo sapiens dopey family member 2 (DOPEY2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 16301316] [evidence ISS]	The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [pmid 16301316] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [pmid 16301316] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10950924] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C21orf5	C21orf5
Homo sapiens	Unigene	Hs.333856	ILMN_86475	HS.333856	Hs.333856		Hs.333856		13724812	BG203125			ILMN_1890575	0003940102	S	262	ATATCTGCGAGCGGAGCATTCCAGGCAGAGGGGACTGCAAGAGCAAAGGC					RST22499 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_145271.3	ILMN_4498	ZNF688	NM_145271.3	NM_145271.3		146542	67003556	NM_145271.3	ZNF688	NP_660314.1	ILMN_1812877	0006420672	I	605	CAGAATCCTCGAATCCCTAGCAGCCAGTCCCTGCTACTTCGGTTGCCTCG	16	-	30583074-30583123	16p11.2c	Homo sapiens zinc finger protein 688 (ZNF688), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_002957.3	ILMN_6758	RXRA	NM_002957.3	NM_002957.3		6256	21536318	NM_002957.3	RXRA	NP_002948.1	ILMN_1687315	0007000356	S	5207	AAGCCTTGCTCTGTTGTGTCCTGTTGCCGGCTCTGGCCTTCCTGTGACTG	9	+	136472031-136472080	9q34.2b	Homo sapiens retinoid X receptor, alpha (RXRA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7990953] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems [goid 6766] [pmid 1651173] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 18544046] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 17538076] [evidence IMP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 12037571] [evidence IDA]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [pmid 17538076] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [evidence IEA]; The expansion of a cardiac muscle cell population by cell division [goid 60038] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12037571] [evidence IDA];  [goid 3706] [pmid 7990953] [evidence IDA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 1651173] [evidence TAS];  [goid 4886] [pmid 1310260] [evidence TAS]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12040021] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ16020; FLJ16733; NR2B1; MGC102720	FLJ16020; FLJ16733; NR2B1; MGC102720
Homo sapiens	RefSeq	NM_002996.3	ILMN_9636	CX3CL1	NM_002996.3	NM_002996.3		6376	54111253	NM_002996.3	CX3CL1	NP_002987.1	ILMN_1654072	0000630521	S	3079	TTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGGACTTTGT	16	+	55976263-55976312	16q13c	Homo sapiens chemokine (C-X3-C motif) ligand 1 (CX3CL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12714508] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12714508] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12714508] [evidence IDA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 12714508] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 12714508] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 11777952] [evidence TAS]; The movement of a leukocyte in response to an external stimulus [goid 30595] [pmid 11777952] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [pmid 11777952] [evidence IEP]; The activation of loosely bound or rolling leukocytes by signals displayed on blood vessel endothelial cells, which is typically the second step in cellular extravasation [goid 50902] [pmid 12714508] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of calcium-independent cell-cell adhesion [goid 51041] [pmid 12714508] [evidence IDA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 12714508] [evidence TAS]	NTN; CXC3C; NTT; fractalkine; ABCD-3; neurotactin; SCYD1; C3Xkine; CXC3	NTN; CXC3C; NTT; fractalkine; ABCD-3; neurotactin; SCYD1; C3Xkine; CXC3
Homo sapiens	RefSeq	NM_004366.2	ILMN_15739	CLCN2	NM_004366.2	NM_004366.2		1181	5803001	NM_004366.2	CLCN2	NP_004357.2	ILMN_1688633	0002760241	S	2290	GGCGAGATGAGCCCTGAAGAGATTCTGGAGTGGGAGGAGCAGCAACTAGA	3	-	185552570-185552599:185552775-185552794	3q27.1b	Homo sapiens chloride channel 2 (CLCN2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [pmid 7795595] [evidence TAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	EGMA; EGI3; CIC-2; CLC2; ECA3	ECA3; EGMA; EGI3; CIC-2; CLC2
Homo sapiens	RefSeq	NM_001040174.1	ILMN_167062	HTR4	NM_001040174.1	NM_001040174.1		3360	94421461	NM_001040174.1	HTR4	NP_001035264.1	ILMN_2410905	0001010278	A	820	CTAAGGAGCATGCCCATCAGATCCAGATGTTACAACGGGCAGGAGCCTCC	5	-	147908588-147908624:147909893-147909905	5q33.1a	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 4 (HTR4), transcript variant n, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16102731] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9276448] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 9603189] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 16102731] [evidence IDA]	5-HT4; 5-HT4R	5-HT4; 5-HT4R
Homo sapiens	RefSeq	XR_017376.2	ILMN_172619	LOC646956	XR_017376.2	XR_017376.2		646956	169208230	XR_017376.2	LOC646956		ILMN_3276697	0005260523	M	831	TCTGAGGGGCGTGCAGATGACTGTGCTGAGAAGGGGGACCTACTGGATGA	15	+	77316442-77316491	15q25.1a	PREDICTED: Homo sapiens misc_RNA (LOC646956), miscRNA.					
Homo sapiens	RefSeq	XR_017376.2	ILMN_172619	LOC646956	XR_017376.2	XR_017376.2		646956	169208230	XR_017376.2	LOC646956		ILMN_3200217	0005130364	A	1356	CCCTGACTGCAAAGGCAAGCTTATTTAGTTGAGTAGCTCCTGAAAGCAGC	15	+	77316967-77317016	15q25.1a	PREDICTED: Homo sapiens misc_RNA (LOC646956), miscRNA.					
Homo sapiens	Unigene	Hs.527241	ILMN_100879	HS.527241	Hs.527241		Hs.527241		19389968	BM930795			ILMN_1845347	0004830367	S	636	GTGATGTGCCACCTTCAGCAGCTCTGTCTTCACACGTCCAGCCTGCGCCT	5	+	178329158-178329207		UI-E-EJ1-ajb-c-08-0-UI.r1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajb-c-08-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_004003.2	ILMN_21374	CRAT	NM_004003.2	NM_004003.2		1384	21618333	NM_004003.2	CRAT	NP_003994.2	ILMN_1705767	0005810747	I	58	CATCGCCACTGCCACCTGCCTCCCGCTGAATCTTGGCTCTTGTCTTCTCT	9	-	130911009-130911058	9q34.11c	Homo sapiens carnitine acetyltransferase (CRAT), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 7829107] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 7829107] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA];  [goid 15980] [pmid 7829107] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + carnitine = CoA + O-acetylcarnitine [goid 4092] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CAT1	CAT1
Homo sapiens	RefSeq	XR_037520.1	ILMN_339341	LOC729815	XR_037520.1	XR_037520.1		729815	169184514	XR_037520.1	LOC729815		ILMN_3299917	0002810445	M	1404	CTCCTCAGCTACTTCAATAATCTCCACTTGTGGTCCCTGGGACTTCAGCC				10q22.3e	PREDICTED: Homo sapiens misc_RNA (LOC729815), miscRNA.					
Homo sapiens	Unigene	Hs.13997	ILMN_71364	HS.13997	Hs.13997		Hs.13997		11013465	AU151944			ILMN_1870529	0003800064	S	159	CACCAGTTGGCTCCCCTGTATTTCTCTCGGCCCTCACAGGTTGTCACAGC	12	-	15948440-15948489		AU151944 NT2RP2 Homo sapiens cDNA clone NT2RP2006434 3, mRNA sequence					
Homo sapiens	RefSeq	NM_130807.2	ILMN_20859	MOBKL2A	NM_130807.2	NM_130807.2		126308	40018625	NM_130807.2	MOBKL2A	NP_570719.1	ILMN_1721344	0000010161	S	3259	TCACTCCATCCACCTCGGAGACCACCCTCCCCCAGCCAGATACGGAATAA	19	-	2071057-2071106	19p13.3h	Homo sapiens MOB1, Mps One Binder kinase activator-like 2A (yeast) (MOBKL2A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	moblak	moblak
Homo sapiens	RefSeq	XM_934230.1	ILMN_42629	UNC13C	XM_934230.1	XM_934230.1		440279	89038275	XM_934230.1	UNC13C	XP_939323.1	ILMN_1675086	0005860181	I	42	GCTGCTTGGCGGGGTGGATAATATCCTGGTCAAAATGACTGAGCCACATC	15	+	52688879-52688928	15q21.3a-q21.3b	PREDICTED: Homo sapiens unc-13 homolog C (C. elegans), transcript variant 3 (UNC13C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_001720651.1	ILMN_350506	LOC100134050	XM_001720651.1	XM_001720651.1		100134050	169217800	XM_001720651.1	LOC100134050	XP_001720703.1	ILMN_3247788	0005890180	S	3332	CCCAAATAGCTATCTGGGAAATTCAAGAAGTCCCTGAGAGTAGGTAGCAG					PREDICTED: Homo sapiens similar to ZNF286A protein (LOC100134050), mRNA.					
Homo sapiens	RefSeq	NM_017555.1	ILMN_167381	EGLN2	NM_017555.1	NM_017555.1		112398	8922129	NM_017555.1	EGLN2	NP_060025.1	ILMN_1815686	0000160064	I	2930	ATTCACTTTGAGAGCCCGAGGGGTGGGAGGGAGTGATGCAGGCAGACGCT	19	+	46004747-46004796	19q13.2b	Homo sapiens egl nine homolog 2 (C. elegans) (EGLN2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11850811] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 11850811] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 11595184] [evidence IDA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [pmid 11850811] [evidence NAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [pmid 11595184] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 45732] [pmid 11595184] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with ferrous iron, Fe(II) [goid 8198] [pmid 12039559] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [pmid 11595184] [evidence IDA]; Interacting selectively with and responding, e.g. by conformational change, to changes in the cellular level of oxygen (O2) [goid 19826] [pmid 11595184] [evidence IDA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434E026; EIT6; PHD1; HIFPH1	DKFZp434E026; EIT6; PHD1; HIFPH1
Homo sapiens	RefSeq	NM_199171.1	ILMN_24935	PMEPA1	NM_199171.1	NM_199171.1		56937	40317619	NM_199171.1	PMEPA1	NP_954640.1	ILMN_1675858	0000520615	I	5	CCTGAGCCACATCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCTGGTCT	20	-	56286487-56286536	20q13.31a	Homo sapiens prostate transmembrane protein, androgen induced 1 (PMEPA1), transcript variant 4, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10873380] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 10873380] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	STAG1; PMEPA1	STAG1; PMEPA1
Homo sapiens	RefSeq	NM_024430.2	ILMN_16733	PSTPIP2	NM_024430.2	NM_024430.2		9050	24850110	NM_024430.2	PSTPIP2	NP_077748.2	ILMN_1713058	0004290368	S	2670	TTTGCAAAGGGCCAAATTTCCCCAAACTGAACGGGCTCAGGAAATGTTCC	18	-	41817680-41817729	18q21.1a	Homo sapiens proline-serine-threonine phosphatase interacting protein 2 (PSTPIP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC34175; MAYP	MGC34175; MAYP
Homo sapiens	RefSeq	XR_000900.1	ILMN_138133	LOC390354	XR_000900.1	XR_000900.1		390354	89035676	XR_000900.1	LOC390354		ILMN_1676765	0000510397	A	152	CCAAGTCCCGCTTCTGGTACTTTGTATCTCAGTTAAAGAAGATGAAGAAA	12	+	103183335-103183383:103183445-103183445	12q23.3a	PREDICTED: Homo sapiens similar to ribosomal protein L18a; 60S ribosomal protein L18a, transcript variant 36 (LOC390354), misc RNA.					
Homo sapiens	RefSeq	NM_004421.2	ILMN_20224	DVL1	NM_004421.2	NM_004421.2		1855	32479520	NM_004421.2	DVL1	NP_004412.2	ILMN_1655632	0001660093	I	703	ACAAACGCCGGCGGAGGAAGCAGCGCCTTCGGCAGGCGGACCGGGCCTCC	1	-	1275690-1275696:1275790-1275832	1p36.33a	Homo sapiens dishevelled, dsh homolog 1 (Drosophila) (DVL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9192851] [evidence TAS]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 8817329] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8817329] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14750955] [evidence IPI]	DVL; MGC54245	DVL; MGC54245
Homo sapiens	Unigene	Hs.547601	ILMN_109574	HS.547601	Hs.547601		Hs.547601		3483432	AF086087			ILMN_1867663	0001740278	S	333	CAAAGCTGGGTATGTGCTTGAAGGAATTTTGCTGGGACAAGGATCTGTAG	22	-	22411083-22411132		Homo sapiens full length insert cDNA clone YZ84G08					
Homo sapiens	RefSeq	XM_939674.1	ILMN_164881	LOC222967	XM_001130509.1	XM_001130509.1		222967	113431176	XM_001130509.1	LOC222967	XP_001130509.1	ILMN_1698103	0002470435	S	248	ACATAGCTGGGTTTCCGGATCTTGAAGTTGAATTCATCAGCTGCCTGGAC				7p22.1b	PREDICTED: Homo sapiens hypothetical protein LOC222967 (LOC222967), mRNA.					
Homo sapiens	RefSeq	NM_020856.1	ILMN_19320	TSHZ3	NM_020856.2	NM_020856.2		57616	127138956	NM_020856.2	TSHZ3	NP_065907.2	ILMN_1743933	0005870424	S	4800	GACACCGTAACACACTCTGTGCCCTGTTTGGTTGTTGACAATGAAGCACC	19	-	36457754-36457803	19q12d	Homo sapiens teashirt zinc finger homeobox 3 (TSHZ3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF537; TSH3; KIAA1474	TSH3; KIAA1474
Homo sapiens	Unigene	Hs.562727	ILMN_115764	HS.562727	Hs.562727		Hs.562727		18984139	BM674241			ILMN_1853239	0001570670	S	496	GGGCAGTATACAACCTGCACGGCCAACCACTGCAGACTATCTGGGTCTCC	17	+	29150979-29151028		UI-E-EJ0-ahj-f-02-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahj-f-02-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015215.1	ILMN_179380	CAMTA1	NM_015215.1	NM_015215.1		23261	54112400	NM_015215.1	CAMTA1	NP_056030.1	ILMN_1661940	0003930411	S	8151	ACGAACCCCTCTCTGGCTGCACGGTCGCTTATGGCAGTTCCACACAGTAG	1	+	7735180-7735180:7737659-7737707	1p36.31a-p36.23b	Homo sapiens calmodulin binding transcription activator 1 (CAMTA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		KIAA0833	KIAA0833
Homo sapiens	RefSeq	NM_001080484.1	ILMN_180591	KIAA1751	NM_001080484.1	NM_001080484.1		85452	122937415	NM_001080484.1	KIAA1751	NP_001073953.1	ILMN_2415979	0005570593	A	4422	TGACCATCCAGGCACAGTGGCTCATGCCTGTAATCCCAGAACTTTGGGAG	1	-	1886840-1886889	1p36.33a	Homo sapiens KIAA1751 (KIAA1751), mRNA.				RP1-140A9.6; FLJ45476	RP1-140A9.6; FLJ45476
Homo sapiens	RefSeq	NM_001113205.1	ILMN_350457	TSTD1	NM_001113205.1	NM_001113205.1		100131187	163965370	NM_001113205.1	TSTD1	NP_001106676.1	ILMN_3234456	0003420445	I	393	TACGGGGAGGTGTGGCTGCTAGCTGGGAGGTGATGGGGACTGCCTGTCAT	1	-	161007651-161007668:161007669-161007700	1q23.3a	Homo sapiens thiosulfate sulfurtransferase (rhodanese)-like domain containing 1 (TSTD1), transcript variant 3, mRNA.				KAT	KAT
Homo sapiens	RefSeq	XM_378917.3	ILMN_177611	LOC400796	XM_001132413.1	XM_001132413.1		400796	113411528	XM_001132413.1	LOC400796	XP_001132413.1	ILMN_1805408	0005570685	S	563	CCCTGTCAGACTCTAGCTCTCAAAGGCTGTCATCCTCCAAGGGTATTCCC	1	-	175629231-175629280	1q25.2a-q25.2b	PREDICTED: Homo sapiens hypothetical LOC400796 (LOC400796), mRNA.					
Homo sapiens	RefSeq	NM_018055.3	ILMN_172650	NODAL	NM_018055.3	NM_018055.3		4838	38176152	NM_018055.3	NODAL	NP_060525.2	ILMN_1712537	0000630537	S	1437	GCTTTCATGTATTCTCCAAAGTAGTCTGTGTGTGACCTGTCCCCCTCCCC	10	-	71862255-71862304	10q22.1b	Homo sapiens nodal homolog (mouse) (NODAL), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IEA]; The process that prevents cells of the epiblast from differentiating into neuroepithelial cells before the appropriate time [goid 2085] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [evidence IEA]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC138230	MGC138230
Homo sapiens	RefSeq	NM_002517.2	ILMN_5949	NPAS1	NM_002517.2	NM_002517.2		4861	22027481	NM_002517.2	NPAS1	NP_002508.2	ILMN_1747067	0002900373	S	1977	GGTCCCCCAGGACAGTAGGCCCGGCTCTGCCCGTAGCCCTGAGAATTAAA	19	+	47548951-47549000	19q13.32b	Homo sapiens neuronal PAS domain protein 1 (NPAS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9012850] [evidence TAS]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9012850] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	PASD5; MOP5	PASD5; MOP5
Homo sapiens	RefSeq	NR_002195.1	ILMN_12492	GOLGA2LY2	NR_002195.1	NR_002195.1		401634	57012334	NR_002195.1	GOLGA2LY2		ILMN_3235780	0000380286	S	1	CGGGGAAGGCCATGCATCATCTGCTACCCTGGAGGATCTGGAGCCAGTAC	Y	+	26010846-26010888:26011075-26011081	Yq11.23b	Homo sapiens golgi autoantigen, golgin subfamily a, 2-like, Y-linked 2 (GOLGA2LY2), non-coding RNA.					
Homo sapiens	RefSeq	NM_015331.2	ILMN_8729	NCSTN	NM_015331.2	NM_015331.2		23385	62548867	NM_015331.2	NCSTN	NP_056146.1	ILMN_1735180	0007210719	S	2718	GCTGAGCCTACTGTCTCCTTCCCACTGTCCTTTCTCCAGGCCCTCAGATG	1	+	158595149-158595198	1q23.2d	Homo sapiens nicastrin (NCSTN), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15274632] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15274632] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15274632] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10993067] [evidence NAS]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [pmid 15274632] [evidence IDA]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [pmid 15274632] [evidence TAS]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [pmid 15274632] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [pmid 15274632] [evidence TAS]; Any process that activates or increases the activity of an enzyme [goid 43085] [pmid 15274632] [evidence IDA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12297508] [evidence IPI]	APH2; RP11-517F10.1; KIAA0253	APH2; RP11-517F10.1; KIAA0253
Homo sapiens	RefSeq	XM_001725603.1	ILMN_348266	LOC100128252	XM_001725603.1	XM_001725603.1		100128252	169213344	XM_001725603.1	LOC100128252	XP_001725655.1	ILMN_3268403	0003140114	M	10	GGAGAGCACAGACTGGACCCTGCTACGATCTCTCTTGGAGTGGATCAGAC	19	+	61697375-61697424	19q13.43a	PREDICTED: Homo sapiens similar to MGC9913 protein (LOC100128252), mRNA.					
Homo sapiens	RefSeq	NM_024583.2	ILMN_181089	SCRN3	NM_024583.2	NM_024583.2		79634	38504670	NM_024583.2	SCRN3	NP_078859.2	ILMN_1699844	0002120661	S	1906	CAAACATGCTCTTTGTCAAGACTTGGCTAACCAGTGAGCTTGTAGCTCTG	2	+	175001412-175001461	2q31.1g	Homo sapiens secernin 3 (SCRN3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]	MGC149597; SES3; FLJ23142	SES3; FLJ23142
Homo sapiens	RefSeq	NM_024583.2	ILMN_181089	SCRN3	NM_024583.2	NM_024583.2		79634	38504670	NM_024583.2	SCRN3	NP_078859.2	ILMN_2116516	0003120025	S	2077	ACTGTTTCTGGGTCTGAAATCTCTCTCATTGTTTACTTCTGTTCACTCAG	2	+	175001583-175001632	2q31.1g	Homo sapiens secernin 3 (SCRN3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]	MGC149597; SES3; FLJ23142	MGC149597; SES3; FLJ23142
Homo sapiens	RefSeq	XM_928203.1	ILMN_39859	LOC645167	XM_928203.1	XM_928203.1		645167	89035432	XM_928203.1	LOC645167	XP_933296.1	ILMN_1657210	0007330017	S	61	CGGACCACCTGGAAGCCCAGGCAGAAACCTGCCACAGGGATGGAGCCACC	12	-	25027695-25027744		PREDICTED: Homo sapiens hypothetical protein LOC645167 (LOC645167), mRNA.					
Homo sapiens	RefSeq	XM_942113.1	ILMN_169089	LOC642414	XR_016151.1	XR_016151.1		642414	113422531	XR_016151.1	LOC642414		ILMN_1790411	0000630450	S	138	CCAAGCTCCAAAGGGCTGTCCTGTGTGTGGGAAAATCCCCCAGAAGACTG	11	+	89193035-89193084	11q14.3b	PREDICTED: Homo sapiens similar to tripartite motif protein 17 (LOC642414), mRNA.					
Homo sapiens	RefSeq	NM_001006682.1	ILMN_15036	SPIN2B	NM_001006682.1	NM_001006682.1		474343	56682946	NM_001006682.1	SPIN2B	NP_001006683.1	ILMN_2317555	0000770162	A	189	CATTCACTCGGCCGGTCGCCTGCTGACCCTCCTTCGCCACAGGCTCGTAG	X	-	57164466-57164515	Xp11.1b	Homo sapiens spindlin family, member 2B (SPIN2B), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]		SPIN2_duplicate; dJ323P24.2; SPIN-2	SPIN2_duplicate; dJ323P24.2; SPIN-2
Homo sapiens	RefSeq	XM_926953.1	ILMN_31745	LOC643648	XM_926953.1	XM_926953.1		643648	89029383	XM_926953.1	LOC643648	XP_932046.1	ILMN_1664611	0002450692	S	24	GCATATCAAAAATGCTCTCCAGTATCTCCTGCCGAGCTGCTCTGTTCCCG	9	+	46601480-46601492:46603782-46603818		PREDICTED: Homo sapiens hypothetical protein LOC643648 (LOC643648), mRNA.					
Homo sapiens	RefSeq	NM_178271.1	ILMN_173494	ATG4A	NM_178271.1	NM_178271.1		115201	30795249	NM_178271.1	ATG4A	NP_840055.1	ILMN_1768960	0005290370	I	365	GGCCCTCACTTAGCGTGGAGGAAGGAACAGGAAGAGGCTGATGAAAAGGC	X	+	107256799-107256848	Xq22.3c	Homo sapiens ATG4 autophagy related 4 homolog A (S. cerevisiae) (ATG4A), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12446702] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12446702] [evidence ISS]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 12446702] [evidence ISS]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 12446702] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12473658] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 15169837] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 12446702] [evidence ISS]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [pmid 12446702] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [pmid 12446702] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12446702] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12446702] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [pmid 12473658] [evidence IDA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [pmid 15169837] [evidence IDA]	APG4A; AUTL2	APG4A; AUTL2
Homo sapiens	RefSeq	NM_182752.3	ILMN_27261	TPRG1L	NM_182752.3	NM_182752.3		127262	71725349	NM_182752.3	TPRG1L	NP_877429.2	ILMN_1727479	0004260722	S	2306	TGCAGGGCTGCCTCAGAAGCTGGCTGGGGACTCTAGCCTCTGTGTTCATA	1	+	3536433-3536482	1p36.32b	Homo sapiens tumor protein p63 regulated 1-like (TPRG1L), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [pmid 17869247] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]			RP11-46F15.3; FLJ21811	RP11-46F15.3; FLJ21811
Homo sapiens	RefSeq	XM_937234.1	ILMN_40036	KIAA1571	XM_937234.2	XM_937234.2		57683	113414229	XM_937234.2	KIAA1571	XP_942327.1	ILMN_1740711	0002650634	A	9469	CACATTGGAAGCCCTTCTAAGTACCATTTTCATTGGGGGCAGGGAGAAGG				2q33.3b	PREDICTED: Homo sapiens KIAA1571 protein (KIAA1571), mRNA.					
Homo sapiens	RefSeq	NM_022353.1	ILMN_25903	OSGEPL1	NM_022353.1	NM_022353.1		64172	11641264	NM_022353.1	OSGEPL1	NP_071748.1	ILMN_1658909	0002060603	S	1212	CGTGGTGGCTTGGGCATTTTACATGACATAGAAGGCATCCGCTATGAACC	2	-	190325627-190325676	2q32.2a	Homo sapiens O-sialoglycoprotein endopeptidase-like 1 (OSGEPL1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_497029.2	ILMN_31941	LOC441408	XM_497029.2	XM_497029.2		441408	89029389	XM_497029.2	LOC441408	XP_497029.1	ILMN_1659273	0004390504	I	1270	ATTAGATTCTTTCTCACAGCCCTCAGAAGGAACCAGCCCTGCCAAGAACT	9	+	46689960-46690009		PREDICTED: Homo sapiens hypothetical LOC441408, transcript variant 1 (LOC441408), mRNA.					
Homo sapiens	RefSeq	NM_175886.2	ILMN_168391	PRPS1L1	NM_175886.2	NM_175886.2		221823	31343499	NM_175886.2	PRPS1L1	NP_787082.1	ILMN_2232953	0004060180	S	690	CTGCATAGTGCTAGTGGGAGATGTGAATGATCGTGTGGCTATCCTTGTAG	7	-	18120062-18120111	7p21.1b	Homo sapiens phosphoribosyl pyrophosphate synthetase 1-like 1 (PRPS1L1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9156] [evidence NAS]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells [goid 44249] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [pmid 2168892] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRPS1; PRPSL; PRPS3; PRS-III	PRPS1; PRPSL; PRPS3; PRS-III
Homo sapiens	Unigene	Hs.565575	ILMN_118034	HS.565575	Hs.565575		Hs.565575		4150493	AI371740			ILMN_1901867	0004390554	S	409	GGAGAAACCGGAACCTTCACACATTGCTGGTGGGAATCAAATTGCTCAGC					ta34a11.x1 NCI_CGAP_GC4 Homo sapiens cDNA clone IMAGE:2045948 3 similar to contains L1.t3 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_152240.1	ILMN_9027	ZMAT3	NM_152240.1	NM_152240.1		64393	23199977	NM_152240.1	ZMAT3	NP_689426.1	ILMN_1654262	0003140543	A	1636	GGTCAGCAGAGATTTCAGTTTCCCAGGGCTTAACCAGAACCGCCACCTCA	3	-	180224833-180224882	3q26.32c	Homo sapiens zinc finger, matrin type 3 (ZMAT3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PAG608; WIG1; FLJ12296; WIG-1; MGC10613	PAG608; WIG1; FLJ12296; WIG-1; MGC10613
Homo sapiens	RefSeq	NM_152240.1	ILMN_9027	ZMAT3	NM_152240.1	NM_152240.1		64393	23199977	NM_152240.1	ZMAT3	NP_689426.1	ILMN_2361104	0006560601	A	1991	TAAGATGGATATGATTTCAAAAAATAGGGCCGGGCGCGGTGGCTCACGCC	3	-	180224478-180224527	3q26.32c	Homo sapiens zinc finger, matrin type 3 (ZMAT3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PAG608; WIG1; FLJ12296; WIG-1; MGC10613	PAG608; WIG1; FLJ12296; WIG-1; MGC10613
Homo sapiens	RefSeq	NM_003260.3	ILMN_5695	TLE2	NM_003260.3	NM_003260.3		7089	34147648	NM_003260.3	TLE2	NP_003251.2	ILMN_1814917	0006560520	S	2409	GGACAGACATCCTAGCAGCCGCCTCCCAGCCCTGCCTAGGAACCGTACAT	19	-	2948739-2948788	19p13.3f	Homo sapiens transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila) (TLE2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1303260] [evidence TAS]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8808280] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 8808280] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17041588] [evidence IPI]	FLJ41188; GRG2; ESG2; ESG	FLJ41188; ESG2; ESG; GRG2
Homo sapiens	RefSeq	NM_054016.1	ILMN_30145	SFRS13A	NM_054016.1	NM_054016.1		10772	16905516	NM_054016.1	SFRS13A	NP_473357.1	ILMN_2354649	0006110014	A	2	TCTGAGGCTCGGCCGCCTGAGCCGCGGACGGTTTGCTGAGCCCGTTAGTG	1	-	24306770-24306819	1p36.11d	Homo sapiens splicing factor, arginine/serine-rich 13A (SFRS13A), transcript variant 2, mRNA.				SRp38; SFRS13; SRrp40; TASR; NSSR; FUSIP2; TASR2; TASR1	SRp38; SFRS13; SRrp40; TASR; NSSR; FUSIP2; TASR2; TASR1
Homo sapiens	RefSeq	NM_054016.1	ILMN_30145	SFRS13A	NM_054016.1	NM_054016.1		10772	16905516	NM_054016.1	SFRS13A	NP_473357.1	ILMN_2265082	0000160386	I	2390	TTGCTTACAGATACAAGTACGAATTATGGACAAACGATTCCTTTTAGAGG	1	-	24296057-24296106	1p36.11d	Homo sapiens splicing factor, arginine/serine-rich 13A (SFRS13A), transcript variant 2, mRNA.				SRp38; SFRS13; SRrp40; TASR; NSSR; FUSIP2; TASR2; TASR1	SRp38; SFRS13; SRrp40; TASR; NSSR; FUSIP2; TASR2; TASR1
Homo sapiens	RefSeq	NM_054016.1	ILMN_30145	SFRS13A	NM_054016.1	NM_054016.1		10772	16905516	NM_054016.1	SFRS13A	NP_473357.1	ILMN_1677162	0005310300	I	762	AAAAAGAACCACCTAGATCCAAATCTCAGTCAAGATCACAGTCTAGGTCT	1	-	24297685-24297734	1p36.11d	Homo sapiens splicing factor, arginine/serine-rich 13A (SFRS13A), transcript variant 2, mRNA.				SRp38; SFRS13; SRrp40; TASR; NSSR; FUSIP2; TASR2; TASR1	SRp38; SFRS13; SRrp40; TASR; NSSR; FUSIP2; TASR2; TASR1
Homo sapiens	RefSeq	XR_039767.1	ILMN_342039	LOC100128023	XR_039767.1	XR_039767.1		100128023	169165249	XR_039767.1	LOC100128023		ILMN_3184664	0002060632	A	437	CTCGAGAAAACACAAGGCAGTGACCGAGAGAGCAAGAGGCTTCAGAAAAG	3	-	195194217-195194266	3q29c	PREDICTED: Homo sapiens misc_RNA (LOC100128023), miscRNA.					
Homo sapiens	RefSeq	XM_932192.1	ILMN_40634	LOC643834	XM_932192.1	XM_932192.1		643834	89033999	XM_932192.1	LOC643834	XP_937285.1	ILMN_1736017	0004120504	I	1	TTTTTTCTCCCTCTCTATTCAGCTGTCTCCATCCCCCTTTTCCGCCTCTC	11	+	60727746-60727795	11q12.2b	PREDICTED: Homo sapiens similar to Pepsin A precursor, transcript variant 2 (LOC643834), mRNA.					
Homo sapiens	RefSeq	NM_003988.2	ILMN_179644	PAX2	NM_003988.3	NM_003988.3		5076	152963639	NM_003988.3	PAX2	NP_003979.2	ILMN_1734365	0003360338	I	1599	TCATGAGCAAGCCGGGGAGGAAGCTTGCAGAAGTGCCCCCTTGTGTGCAA	10	+	102509548-102509597	10q24.31a	Homo sapiens paired box 2 (PAX2), transcript variant c, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [pmid 18000879] [evidence IDA]; A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; cetriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome [goid 34451] [pmid 18000879] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [pmid 9106533] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9106533] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9106533] [evidence TAS]		
Homo sapiens	RefSeq	NM_016145.1	ILMN_20628	C19ORF56	NM_016145.2	NM_016145.2		51398	142359053	NM_016145.2	C19orf56	NP_057229.1	ILMN_1757914	0003800079	S	745	CCCTGCCTGCTGCTGGGGGAGATGCTGTCCATGTTTCTAGGGGTATTCAT	19	-	12639931-12639980	19p13.13c	Homo sapiens chromosome 19 open reading frame 56 (C19orf56), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			PTD008	PTD008
Homo sapiens	RefSeq	NR_002974.1	ILMN_168357	SNORA42	NR_002974.1	NR_002974.1		677823	91680839	NR_002974.1	SNORA42		ILMN_3248575	0006960438	S	57	CATAGCAAATGGCAGCCTCGAACCATTGCCCAGTCCCCTTACCTGTGGGC	1	-	155889727-155889776	1q22c	Homo sapiens small nucleolar RNA, H/ACA box 42 (SNORA42), small nucleolar RNA.				ACA42	ACA42
Homo sapiens	Unigene	Hs.578698	ILMN_130879	HS.578698	Hs.578698		Hs.578698		28444660	CB270075			ILMN_1898368	0006620082	S	382	AATAGCAGGGCAGATAAGATGGCAGCGAACCAGGACCGAGAGGCCGAGGA	16	-	87107166-87107211:87115930-87115933		1008982 Human Fat Cell 5-Stretch Plus cDNA Library Homo sapiens cDNA 5', mRNA sequence					
Homo sapiens	RefSeq	NM_033221.1	ILMN_24510	TRIM14	NM_033221.1	NM_033221.1		9830	15208668	NM_033221.1	TRIM14	NP_150090.1	ILMN_2383290	0001300040	A	528	ATCCTGTCCAGAGGCTTCAGGCATACACGGCCACCGAGCAGGAGATGCAG	9	-	100857281-100857311:100862213-100862231	9q22.33b	Homo sapiens tripartite motif-containing 14 (TRIM14), transcript variant 4, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11331580] [evidence IDA]	The regionalization process by which embryonic segments are divided into compartments that will result in differences in cell differentiation [goid 7386] [pmid 11331580] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11331580] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0129	KIAA0129
Homo sapiens	RefSeq	NM_138360.3	ILMN_169114	LRRC16B	NM_138360.3	NM_138360.3		90668	156938256	NM_138360.3	LRRC16B	NP_612369.3	ILMN_3244860	0006290162	S	4262	CCAGGAACAGACTGACAACTGCCACAACACCCTCCTCAGCCCTCGACATG	14	+	23608439-23608453:23608454-23608488	14q11.2g-q12a	Homo sapiens leucine rich repeat containing 16B (LRRC16B), mRNA.				crml-1; C14orf121	crml-1; C14orf121
Homo sapiens	RefSeq	NM_033377.1	ILMN_22652	CGB1	NM_033377.1	NM_033377.1		114335	15619000	NM_033377.1	CGB1	NP_203695.2	ILMN_2044645	0006840609	S	674	CGTCTCCCGGGGCCCTAGGACACCCCGATCCTCCCACAATAAAGGCTTCT	19	-	54230646-54230678:54230679-54230695	19q13.33a	Homo sapiens chorionic gonadotropin, beta polypeptide 1 (CGB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]		
Homo sapiens	RefSeq	NM_033377.1	ILMN_22652	CGB1	NM_033377.1	NM_033377.1		114335	15619000	NM_033377.1	CGB1	NP_203695.2	ILMN_1719750	0001340292	S	185	TCCCAGTGCTTGCGGAAGATATCCCGCTAAGAGAGAGACATGTCAAAGAG	19	-	54231370-54231372:54231772-54231780:54231781-54231818	19q13.33a	Homo sapiens chorionic gonadotropin, beta polypeptide 1 (CGB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]		
Homo sapiens	RefSeq	NM_020117.8	ILMN_174075	LARS	NM_020117.9	NM_020117.9		51520	108773809	NM_020117.9	LARS	NP_064502.9	ILMN_1757317	0000940020	S	3626	GTCCTGGGAAAGGAGTACACCGAGAAGACCCCCATTTCTGAGCATGCTGT	5	-	145517172-145517221	5q32c	Homo sapiens leucyl-tRNA synthetase (LARS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6429] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu) [goid 4823] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	PIG44; KIAA1352; hr025Cl; FLJ10595; LEURS; LEUS; LARS1; LRS; FLJ21788; RNTLS; HSPC192	PIG44; FLJ10595; LARS1; LEUS; FLJ21788; RNTLS; HSPC192
Homo sapiens	RefSeq	NM_031205.2	ILMN_22733	CABP1	NM_031205.2	NM_031205.2		9478	38176288	NM_031205.2	CABP1	NP_112482.1	ILMN_1813946	0000430324	I	236	AACCTGCTGGGCCCTGCCTGCATTTTCCTGCGCAAGGGCTTCGCTGAGAA	12	+	119578399-119578448	12q24.31a	Homo sapiens calcium binding protein 1 (CABP1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [pmid 15140941] [evidence IDA]		Stops, prevents or reduces the activity of an enzyme [goid 4857] [pmid 9920909] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9920909] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 15980432] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CALBRAIN; HCALB_BR	CALBRAIN; HCALB_BR
Homo sapiens	Unigene	Hs.560046	ILMN_114017	HS.560046	Hs.560046		Hs.560046		51665883	CR741628			ILMN_1839980	0000780209	S	311	GTAGCAGGGACTAGCAGGTGGCTTTTAAGGGAGTGGAAGATAGCCCCCGG					CR741628 Soares_testis_NHT Homo sapiens cDNA clone IMAGp971I22106 ; IMAGE:1376822 5, mRNA sequence					
Homo sapiens	RefSeq	NM_033286.1	ILMN_28790	C15ORF23	NM_033286.1	NM_033286.1		90417	57528365	NM_033286.1	C15orf23	NP_150628.1	ILMN_1652008	0002340528	S	688	GCCTTGATCCAGCTTTAGGCAGTGAGACCCTGGCATCACGACAAGAATCC	15	+	38469412-38469422:38470986-38471024	15q15.1a	Homo sapiens chromosome 15 open reading frame 23 (C15orf23), mRNA.				FLJ14502; HSD11	HSD11; FLJ14502
Homo sapiens	RefSeq	NM_005049.2	ILMN_28098	PWP2	NM_005049.2	NM_005049.2		5822	48762925	NM_005049.2	PWP2	NP_005040.2	ILMN_1698950	0002970133	S	2921	GGGCCAGCAAAGAGGAGGGGTCCAGAGAACAGCTGAAATACTGTCACTAG	21	+	44375152-44375201	21q22.3d	Homo sapiens PWP2 periodic tryptophan protein homolog (yeast) (PWP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8893822] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8661145] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8893822] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8661145] [evidence TAS]	PWP2H; EHOC-17	PWP2H; EHOC-17
Homo sapiens	RefSeq	NM_152305.1	ILMN_15488	KTELC1	NM_152305.1	NM_152305.1		56983	31982952	NM_152305.1	KTELC1	NP_689518.1	ILMN_1774800	0003850161	I	3052	TGATGGCTTCATGATCCAGCACAGTGCCTCACACAAAGAACTATTGGGTG	3	+	120695778-120695827	3q13.33a	Homo sapiens KTEL (Lys-Tyr-Glu-Leu) containing 1 (KTELC1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]			MDSRP; MDS010; C3orf9; MGC32995; hCLP46; CLP46; KDELCL1	MDSRP; MDS010; C3orf9; MGC32995; hCLP46; CLP46; KDELCL1
Homo sapiens	RefSeq	XM_930884.1	ILMN_32261	LOC653080	XM_930884.1	XM_930884.1		653080	89028446	XM_930884.1	LOC653080	XP_935977.1	ILMN_1660343	0006980600	I	6814	ATGGAGCTGGCTTGAAATCCTCTTGTTTATGGCAGTACATATCGGTTATG	8	+	141229-141278	5q13.2b	PREDICTED: Homo sapiens similar to Beta-glucuronidase precursor, transcript variant 2 (LOC653080), mRNA.					
Homo sapiens	RefSeq	XM_926315.1	ILMN_40948	LOC642936	XM_926315.1	XM_926315.1		642936	89028234	XM_926315.1	LOC642936	XP_931408.1	ILMN_1698909	0001990136	S	15	ACACACCAGGGAGAAGGGTTATGAGTGCAGCGACCGCGGAAAAGCCTTCA	8	+	94727478-94727527	8q22.1b	PREDICTED: Homo sapiens similar to zinc finger protein 317 (LOC642936), mRNA.					
Homo sapiens	RefSeq	NM_207315.1	ILMN_3648	CMPK2	NM_207315.2	NM_207315.2		129607	117606369	NM_207315.2	CMPK2	NP_997198.2	ILMN_1783621	0002360348	S	1356	GGATGGAGAATCCTGGCTGCCATGTGGTTGATGCCAGCCCCTCCAGAGAA	2	-	6990034-6990083	2p25.2a	Homo sapiens cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial (CMPK2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dTDP, deoxyribosylthymine diphosphate (2'-deoxyribosylthymine5'-diphosphate) [goid 6233] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dTTP, deoxyribosylthymine triphosphate [goid 6235] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + (d)CMP = ADP + (d)CDP [goid 4127] [evidence IEA]; Catalysis of the reaction: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate [goid 4798] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TYKi; UMP-CMPK2	
Homo sapiens	RefSeq	NR_029517.1	ILMN_387995	MIR29B1	NR_029517.1	NR_029517.1		407024	262205770	NR_029517.1	MIR29B1		ILMN_3309699	0000110619	S	31	GATTTAAATAGTGATTGTCTAGCACCATTTGAAATCAGTGTTCTTGGGGG				7q32.3a	Homo sapiens microRNA 29b-1 (MIR29B1), microRNA.					
Homo sapiens	Unigene	Hs.526528	ILMN_100764	HS.526528	Hs.526528		Hs.526528		4070203	AI333644			ILMN_1817524	0002470176	S	284	TGGTGGGACATCACGCAGTCCATAAAGACAAGAGGGAGGCAGGTGGGTGG	16	+	83067743-83067792		qq08e04.x1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1931934 3, mRNA sequence					
Homo sapiens	RefSeq	XM_944729.1	ILMN_34871	SDC3	XM_944729.1	XM_944729.1		9672	88947642	XM_944729.1	SDC3	XP_949822.1	ILMN_1753523	0006510286	A	954	ACCCACAGAGGTGGCTCAGACCCCAACTCCAGAGACCTTCCTGACCACAA				1p35.2a	PREDICTED: Homo sapiens syndecan 3 (N-syndecan), transcript variant 4 (SDC3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]		
Homo sapiens	RefSeq	NM_001010935.1	ILMN_20446	RAP1A	NM_001010935.1	NM_001010935.1		5906	58331201	NM_001010935.1	RAP1A	NP_001010935.1	ILMN_1766176	0003400468	I	188	GGTGATTACCCTGTGTATAAGAGTATGTGTCTCACTGCACCTTCAATGGC	1	+	111971650-111971699	1p13.2d	Homo sapiens RAP1A, member of RAS oncogene family (RAP1A), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16284401] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10777492] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11022048] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAP1; KREV-1; KREV1; SMGP21	RAP1; KREV-1; KREV1; SMGP21
Homo sapiens	RefSeq	XM_926720.1	ILMN_34288	PSPHL	XM_926720.1	XM_926720.1		8781	89024914	XM_926720.1	PSPHL	XP_931813.1	ILMN_1688312	0003420537	A	372	CCCAGATTCTCAGGAGCATGGCAGGGAGCTGGTAAGTCGCCTACAGGAGC	7	+	55795604-55795627:55799986-55800011		PREDICTED: Homo sapiens phosphoserine phosphatase-like (PSPHL), mRNA.		The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9573387] [evidence TAS]	Catalysis of the reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate [goid 4647] [pmid 9573387] [evidence TAS]		
Homo sapiens	Unigene	Hs.539928	ILMN_104840	HS.539928	Hs.539928		Hs.539928		3215096	AI005586			ILMN_1835466	0001430646	S	120	AGAAGTTTTGGAATGGAGGGTATGCAAGGGGTGAGGCAGTGCAGGTCATC					ov58f12.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1641551 3, mRNA sequence					
Homo sapiens	RefSeq	NR_003598.1	ILMN_308261	LOC442308	NR_003598.1	NR_003598.1		442308	150170711	NR_003598.1	LOC442308		ILMN_3248008	0001230446	S	1067	CCACCTCATGGCCTCAAGATGGCTGTCACCTTCATCGGAAACAGCACTGG	7	+	55681872-55681921	7p11.2b	Homo sapiens similar to tubulin, beta 5 (LOC442308), non-coding RNA.					
Homo sapiens	RefSeq	XM_001722453.1	ILMN_334995	LOC100129396	XM_001722453.1	XM_001722453.1		100129396	169210809	XM_001722453.1	LOC100129396	XP_001722505.1	ILMN_3235690	0001990463	S	626	GCTCTGTACGTGGTAGGTGCTCACTGCCCTATTGTTTGGGTGTATGCCTC	17	+	16633565-16633614	17p11.2h	PREDICTED: Homo sapiens similar to Protein FAM106A (LOC100129396), mRNA.					
Homo sapiens	RefSeq	XM_001716335.1	ILMN_333872	LOC100131573	XM_001716335.1	XM_001716335.1		100131573	169167992	XM_001716335.1	LOC100131573	XP_001716387.1	ILMN_3274247	0004540142	M	3	GCCGGTGGCCCTGCTGCAGTGTTGTGTAGAAGACTTGGTTAAAAATCAAA				5q15b	PREDICTED: Homo sapiens hypothetical LOC100131573 (LOC100131573), mRNA.					
Homo sapiens	RefSeq	NM_014933.2	ILMN_23819	SEC31A	NM_014933.2	NM_014933.2		22872	41349438	NM_014933.2	SEC31A	NP_055748.2	ILMN_1691409	0004280102	I	1725	GACCAAGTAGCACAGAGTGATGGGGAGGAGAGCCCTGCTGCTGAAGAGCA	4	-	84001820-84001869	4q21.22a	Homo sapiens SEC31 homolog A (S. cerevisiae) (SEC31A), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state [goid 30127] [pmid 10788476] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 10788476] [evidence NAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 11252894] [evidence EXP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17214967] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17196169] [evidence IPI]	KIAA0905; HSPC334; MGC90305; ABP125; SEC31L1; HSPC275; DKFZp686N07171; ABP130	KIAA0905; HSPC334; MGC90305; ABP125; SEC31L1; HSPC275; DKFZp686N07171; ABP130
Homo sapiens	RefSeq	NM_014933.2	ILMN_23819	SEC31A	NM_014933.2	NM_014933.2		22872	41349438	NM_014933.2	SEC31A	NP_055748.2	ILMN_2399896	0005560180	A	3799	CCCAGGCCAATAAGCTGGGTGTCTAAAAGGACAGCTTCTCTTCCACTCAA	4	-	83959226-83959250:83959251-83959275	4q21.22a	Homo sapiens SEC31 homolog A (S. cerevisiae) (SEC31A), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state [goid 30127] [pmid 10788476] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 10788476] [evidence NAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 11252894] [evidence EXP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17214967] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17196169] [evidence IPI]	KIAA0905; HSPC334; MGC90305; ABP125; SEC31L1; HSPC275; DKFZp686N07171; ABP130	KIAA0905; HSPC334; MGC90305; ABP125; SEC31L1; HSPC275; DKFZp686N07171; ABP130
Homo sapiens	RefSeq	NM_014933.2	ILMN_23819	SEC31A	NM_014933.2	NM_014933.2		22872	41349438	NM_014933.2	SEC31A	NP_055748.2	ILMN_1724959	0003840100	A	3545	GCGCTGCCTTTCTTCAGCAACAGACCCTCAAACCAAGAGGAAGCTAGATG	4	-	83961263-83961285:83964732-83964758	4q21.22a	Homo sapiens SEC31 homolog A (S. cerevisiae) (SEC31A), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state [goid 30127] [pmid 10788476] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 10788476] [evidence NAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 11252894] [evidence EXP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17214967] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17196169] [evidence IPI]	KIAA0905; HSPC334; MGC90305; ABP125; SEC31L1; HSPC275; DKFZp686N07171; ABP130	KIAA0905; HSPC334; MGC90305; ABP125; SEC31L1; HSPC275; DKFZp686N07171; ABP130
Homo sapiens	RefSeq	NM_022034.3	ILMN_3724	CUZD1	NM_022034.4	NM_022034.4		50624	115583646	NM_022034.4	CUZD1	NP_071317.2	ILMN_1734909	0005130192	S	1853	CCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACA	10	-	124594447-124594496	10q26.13b	Homo sapiens CUB and zona pellucida-like domains 1 (CUZD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15184879] [evidence NAS]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence IEA]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence ISS]	The formation of adhesions that stabilize protrusions at the leading edge of a migrating cell; involves integrin activation, clustering, and the recruitment of structural and signaling components to nascent adhesions [goid 6931] [pmid 15184879] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 15184879] [evidence NAS]; The proteolytic processing of trypsinogen to the active form, trypsin [goid 32023] [evidence IEA]; The proteolytic processing of trypsinogen to the active form, trypsin [goid 32023] [evidence ISS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	UO-44; ERG-1	UO-44; ERG-1
Homo sapiens	RefSeq	NM_021821.2	ILMN_14777	MRPS35	NM_021821.2	NM_021821.2		60488	16950602	NM_021821.2	MRPS35	NP_068593.2	ILMN_2189993	0007380270	S	1189	ATTTTTACACTGGGGCAATAGACTAGGAGGTCTCTGATTTCTTCTTGGTC	12	+	27799819-27799868	12p11.22b	Homo sapiens mitochondrial ribosomal protein S35 (MRPS35), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [pmid 11279123] [evidence NAS]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The series of events required to receive a stimulus indicating DNA damage has occurred and convert it to a molecular signal [goid 42769] [pmid 15300802] [evidence NAS]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [pmid 11279123] [evidence IC ]		MGC104278; HDCMD11P; MRPS28; MRP-S28; MDS023; DKFZp762P093	MGC104278; HDCMD11P; MRPS28; MRP-S28; MDS023; DKFZp762P093
Homo sapiens	RefSeq	NM_201402.1	ILMN_177752	DUB3	NM_201402.1	NM_201402.1		377630	41349931	NM_201402.1	DUB3	NP_958804.1	ILMN_2335123	0004670017	A	1024	CAAGAAGGCCAGTGGTATAAAATGGATGATGCCGAGGTCACCGCCTCTAG	8	-	12032605-12032654	8p23.1a	Homo sapiens deubiquitinating enzyme 3 (DUB3), mRNA.					
Homo sapiens	RefSeq	XM_942361.1	ILMN_41875	LOC652733	XM_942361.1	XM_942361.1		652733	89077179	XM_942361.1	LOC652733	XP_947454.1	ILMN_1665038	0000990554	S	430	CCTATCTCTGACTTGGTGTTCCTCTCCCACTTGTATCCTGAGCCTGAAGC					PREDICTED: Homo sapiens similar to Phosphodiesterase 4D interacting protein (myomegalin) (LOC652733), mRNA.					
Homo sapiens	RefSeq	XM_499123.2	ILMN_42651	FLJ46284	XM_499123.3	XM_499123.3		441369	113420158	XM_499123.3	FLJ46284	XP_499123.1	ILMN_1675304	0006760079	A	2715	AATGGTTTGCAACTCAACCTGCCTAGTGTGGGGTCTGGAATTCCCACCAC	8	-	93794967-93795016	8q22.1a	PREDICTED: Homo sapiens hypothetical gene supported by AK128161 (FLJ46284), mRNA.					
Homo sapiens	Unigene	Hs.543270	ILMN_106903	HS.543270	Hs.543270		Hs.543270		7377097	AW630307			ILMN_1842913	0007610358	S	68	CAGGGAAAGCTGCATGGAGGAGGCTGGTTATAGCTGCCCTTGCTGTGAAG	3	+	5444377-5444426		hh81c04.y1 NCI_CGAP_GU1 Homo sapiens cDNA clone IMAGE:2969190 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001716907.1	ILMN_350393	LOC100128364	XM_001716907.1	XM_001716907.1		100128364	169172237	XM_001716907.1	LOC100128364	XP_001716959.1	ILMN_3270760	0004230154	M	2221	CTCTGGTAGGGGGCAAGAGCCCAGGAGACTGTGTGGTTTGTCCTCAGCCT				7p13c	PREDICTED: Homo sapiens hypothetical protein LOC100128364 (LOC100128364), mRNA.					
Homo sapiens	RefSeq	NM_006296.3	ILMN_178290	VRK2	NM_006296.3	NM_006296.3		7444	71164883	NM_006296.3	VRK2	NP_006287.2	ILMN_1750088	0006550020	S	1386	GTGAGAGAAGCGCTGAGTCCTGTGCAACATGGAAAGTGCAGAAAGAGGAG	2	+	58227028-58227077	2p16.1b	Homo sapiens vaccinia related kinase 2 (VRK2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9344656] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9344656] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18617507] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16963744] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_943981.1	ILMN_43760	LOC649908	XM_943981.1	XM_943981.1		649908	89039297	XM_943981.1	LOC649908	XP_949074.1	ILMN_1720075	0006960398	S	30	CAAGCTAGATATGAGAACCTGCAATGACAACTGCCCAGGTTGCACGTGCC					PREDICTED: Homo sapiens hypothetical protein LOC649908 (LOC649908), mRNA.					
Homo sapiens	RefSeq	XM_937739.1	ILMN_46931	LOC648672	XM_937739.1	XM_937739.1		648672	89059130	XM_937739.1	LOC648672	XP_942832.1	ILMN_1678726	0002060196	S	951	TTTCACCCCATACCGCTCACGGGCTGCCCTGGCTGAGCGGGTGCTGGGCA					PREDICTED: Homo sapiens similar to carbonic anhydrase 15 (LOC648672), mRNA.					
Homo sapiens	RefSeq	NM_001008215.1	ILMN_11722	C2ORF64	NM_001008215.1	NM_001008215.1		493753	56118948	NM_001008215.1	C2orf64	NP_001008216.1	ILMN_1683065	0005390372	S	1423	ACCTCCGTGGTTCACTGGAGTTAAAGCAATCGGGGCGTTGTACAGCTCAC	2	-	99216054-99216103	2q11.2c	Homo sapiens chromosome 2 open reading frame 64 (C2orf64), mRNA.				6330578E17Rik; MGC52110	6330578E17Rik; MGC52110
Homo sapiens	Unigene	Hs.174158	ILMN_80459	HS.174158	Hs.174158		Hs.174158		2994766	AA884785			ILMN_1898096	0004860474	S	319	CCCTCAGAGTCAGTGATCCAAGAGTGTAAGCTACCAGTGCTTCCTGGGAC	5	+	112020339-112020364:112021791-112021814		am20e02.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1467386 3, mRNA sequence					
Homo sapiens	RefSeq	XM_937782.1	ILMN_17582	ATP2A1	NM_173201.2	NM_173201.2		487	47132613	NM_173201.2	ATP2A1	NP_775293.1	ILMN_1709541	0004390215	A	1690	ATCTTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAAGGGTGCCCCTG	16	+	28816908-28816947:28817055-28817064	16p11.2e	Homo sapiens ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 (ATP2A1), transcript variant a, mRNA.	The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11402072] [evidence IDA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9405806] [evidence NAS]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence ISS]; A relatively pale zone traversing the center of the A band of a sarcomere, visible in relaxed muscle fibers; consists of the central portion of thick (myosin) filaments that are not overlapped by thin (actin) filaments [goid 31673] [pmid 1329967] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [pmid 1329967] [evidence IDA]; The lipid bilayer surrounding the sarcoplasmic reticulum [goid 33017] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [evidence ISS]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 11402072] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 9405806] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISS]; Any process that modulates the frequency, rate or extent of striated muscle contraction [goid 6942] [pmid 8841193] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of fast-twitch skeletal muscle contraction [goid 31448] [pmid 12479237] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle contraction [goid 45988] [pmid 10914677] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence ISS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 1329967] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence ISS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 8729696] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9405806] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9295312] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]	ATP2A; SERCA1	
Homo sapiens	RefSeq	XM_942375.1	ILMN_17582	ATP2A1	NM_173201.2	NM_173201.2		487	47132613	NM_173201.2	ATP2A1	NP_775293.1	ILMN_1674460	0005490360	S	3047	ATGATCTTCAAGCTCCGGGCCCTGGACCTCACCCAGTGGCTCATGGTCCT	16	+	28822145-28822194	16p11.2e	Homo sapiens ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 (ATP2A1), transcript variant a, mRNA.	The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11402072] [evidence IDA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9405806] [evidence NAS]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence ISS]; A relatively pale zone traversing the center of the A band of a sarcomere, visible in relaxed muscle fibers; consists of the central portion of thick (myosin) filaments that are not overlapped by thin (actin) filaments [goid 31673] [pmid 1329967] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [pmid 1329967] [evidence IDA]; The lipid bilayer surrounding the sarcoplasmic reticulum [goid 33017] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [evidence ISS]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 11402072] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 9405806] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISS]; Any process that modulates the frequency, rate or extent of striated muscle contraction [goid 6942] [pmid 8841193] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of fast-twitch skeletal muscle contraction [goid 31448] [pmid 12479237] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle contraction [goid 45988] [pmid 10914677] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence ISS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 1329967] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence ISS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 8729696] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9405806] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9295312] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]	ATP2A; SERCA1	
Homo sapiens	RefSeq	NM_004320.3	ILMN_17582	ATP2A1	NM_173201.2	NM_173201.2		487	47132613	NM_173201.2	ATP2A1	NP_775293.1	ILMN_1770052	0003850605	A	1687	CAAATCTTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAAGGGTGCCC	16	+	28816905-28816947:28817055-28817061	16p11.2e	Homo sapiens ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 (ATP2A1), transcript variant a, mRNA.	The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11402072] [evidence IDA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9405806] [evidence NAS]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence ISS]; A relatively pale zone traversing the center of the A band of a sarcomere, visible in relaxed muscle fibers; consists of the central portion of thick (myosin) filaments that are not overlapped by thin (actin) filaments [goid 31673] [pmid 1329967] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [pmid 1329967] [evidence IDA]; The lipid bilayer surrounding the sarcoplasmic reticulum [goid 33017] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [evidence ISS]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 11402072] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 9405806] [evidence IMP]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISS]; Any process that modulates the frequency, rate or extent of striated muscle contraction [goid 6942] [pmid 8841193] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of fast-twitch skeletal muscle contraction [goid 31448] [pmid 12479237] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle contraction [goid 45988] [pmid 10914677] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence ISS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 1329967] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence ISS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 8729696] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9405806] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9295312] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]	ATP2A; SERCA1	ATP2A; SERCA1
Homo sapiens	RefSeq	XM_930214.1	ILMN_46544	HSP90AB4P	NR_002927.1	NR_002927.1		664618	89111933	NR_002927.1	HSP90AB4P		ILMN_1783303	0002370730	S	148	GACATCATCCCCAACCCTCGGGAATGCATCCTGACTTTGGTCAACACAGG	15	-	58985127-58985176	15q22.1b	Homo sapiens heat shock protein 90kDa alpha (cytosolic), class B member 4 (pseudogene) (HSP90AB4P), non-coding RNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	HsHsp90Bd; HSP90Bd	
Homo sapiens	RefSeq	NR_002927.1	ILMN_46544	HSP90AB4P	NR_002927.1	NR_002927.1		664618	89111933	NR_002927.1	HSP90AB4P		ILMN_2127098	0001170487	S	1206	AGCCAACTCTGCTTTTGTGGAGCAAGAGTGGAAGAAGGGCTTCGAGGTAA	15	-	58983564-58983613	15q22.1b	Homo sapiens heat shock protein 90kDa alpha (cytosolic), class B member 4 (pseudogene) (HSP90AB4P), non-coding RNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	HsHsp90Bd; HSP90Bd	HsHsp90Bd; HSP90Bd
Homo sapiens	RefSeq	XM_940938.1	ILMN_42431	LOC651721	XM_940938.1	XM_940938.1		651721	89062117	XM_940938.1	LOC651721	XP_946031.1	ILMN_1668740	0004280386	S	120	ACGTCAGTGCTCTCGGGATGGGCCCGGCCACCCCGGAGCAGAACTCACTT					PREDICTED: Homo sapiens hypothetical protein LOC651721 (LOC651721), mRNA.					
Homo sapiens	Unigene	Hs.545044	ILMN_108334	HS.545044	Hs.545044		Hs.545044		30755107	CD101933			ILMN_1817048	0004210594	S	78	AGAGGGCAATTAGGAAAATGTGATAGCAGGGAGACAGTGGCAGGGGACCC	7	-	41382370-41382419		AGENCOURT_13980472 NIH_MGC_187 Homo sapiens cDNA clone IMAGE:30373500 5, mRNA sequence					
Homo sapiens	RefSeq	NM_153022.1	ILMN_13131	C12ORF59	NM_153022.1	NM_153022.1		120939	23308506	NM_153022.1	C12orf59	NP_694567.1	ILMN_1727606	0003130593	S	2004	GACCATGCCGCAGCACAGTGCTAATCTATCCACAAAACATACCACCTCCC	12	+	10234959-10235008	12p13.2c	Homo sapiens chromosome 12 open reading frame 59 (C12orf59), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC111385; FLJ31166	MGC111385; FLJ31166
Homo sapiens	RefSeq	NM_201553.1	ILMN_2104	FGL1	NM_201553.1	NM_201553.1		2267	42544201	NM_201553.1	FGL1	NP_963847.1	ILMN_2366192	0002480228	A	1106	GTCACTCTGCAAACCTGAATGGTGTATACTACAGCGGCCCCTACACGGCT	8	-	17766488-17766537	8p22b	Homo sapiens fibrinogen-like 1 (FGL1), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds [goid 5577] [pmid 8390249] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	HP-041; HFREP1; LFIRE1; MGC12455	HP-041; HFREP1; LFIRE1; MGC12455
Homo sapiens	RefSeq	NM_020147.2	ILMN_182683	THAP10	NM_020147.2	NM_020147.2		56906	31543086	NM_020147.2	THAP10	NP_064532.1	ILMN_1767542	0000150274	S	1719	TGAGAAATAAGCATGGAAATATTAGCTGCCCCGTCTGCCATTCACCAGGA	15	-	71173940-71173989	15q23b	Homo sapiens THAP domain containing 10 (THAP10), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_015383.1	ILMN_29315	NBPF14	NM_015383.1	NM_015383.1		25832	7657016	NM_015383.1	NBPF14	NP_056198.1	ILMN_2204664	0004860431	S	3488	GCCGGTGCAGAATATGAGCAATGCCATGTTCTTGCAGAAAACGCTTAACC	1	-	148003793-148003842	1q21.1d	Homo sapiens neuroblastoma breakpoint family, member 14 (NBPF14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			RP3-328E19.1; DJ328E19.C1.1; NBPF; FLJ35032	RP3-328E19.1; DJ328E19.C1.1; NBPF; FLJ35032
Homo sapiens	RefSeq	NM_015383.1	ILMN_29315	NBPF14	NM_015383.1	NM_015383.1		25832	7657016	NM_015383.1	NBPF14	NP_056198.1	ILMN_1698067	0000360482	S	616	AAGGACCAGTGTCTCCCAGGAATCTGCAGGAGTCTGAAGAGGAGGAAGTC	1	-	148017634-148017665:148021577-148021594	1q21.1d	Homo sapiens neuroblastoma breakpoint family, member 14 (NBPF14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			RP3-328E19.1; DJ328E19.C1.1; NBPF; FLJ35032	RP3-328E19.1; DJ328E19.C1.1; NBPF; FLJ35032
Homo sapiens	RefSeq	NM_032103.1	ILMN_10582	PPP1R12B	NM_032103.1	NM_032103.1		4660	14195596	NM_032103.1	PPP1R12B	NP_115286.1	ILMN_1756289	0002000014	A	1307	GGAGAAACGGGAGAGGCGAGCCTTGGAGCGCAAAATGTCAGAAATGGAGG	1	+	200803573-200803582:200804898-200804937	1q32.1d	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 12B (PPP1R12B), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [pmid 9570949] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9570949] [evidence TAS]	Increases the activity of an enzyme [goid 8047] [pmid 9570949] [evidence TAS]	MGC131980; MYPT2; MGC87886	MGC131980; MYPT2; MGC87886
Homo sapiens	RefSeq	NM_032103.1	ILMN_10582	PPP1R12B	NM_032103.1	NM_032103.1		4660	14195596	NM_032103.1	PPP1R12B	NP_115286.1	ILMN_2379375	0002650475	A	1846	CCCAGTGTCCTCTGATATAGGTGAGTCTTGTGGTAGCCACTCCAGGATCC	1	+	200816703-200816752	1q32.1d	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 12B (PPP1R12B), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [pmid 9570949] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9570949] [evidence TAS]	Increases the activity of an enzyme [goid 8047] [pmid 9570949] [evidence TAS]	MGC131980; MYPT2; MGC87886	MGC131980; MYPT2; MGC87886
Homo sapiens	RefSeq	NM_173801.3	ILMN_164359	PLAC1L	NM_173801.3	NM_173801.3		219990	42476002	NM_173801.3	PLAC1L	NP_776162.2	ILMN_1757220	0002490138	S	1281	CCCTTGTTCCTCCGAATGGTTCTTCCACACTCAAAATAATTGAATGGTTG	11	+	59571741-59571790	11q12.1d	Homo sapiens placenta-specific 1-like (PLAC1L), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			TMEM122; FLJ36198	TMEM122; FLJ36198
Homo sapiens	RefSeq	NM_024348.2	ILMN_2126	DCTN3	NM_024348.2	NM_024348.2		11258	22165422	NM_024348.2	DCTN3	NP_077324.1	ILMN_1786984	0003190373	I	461	GGGAGTCCGTGATGAGGCAGGAAGTTTAGTGGAAGATGTGGGCTTTGCCC	9	-	34614131-34614180	9p13.3c	Homo sapiens dynactin 3 (p22) (DCTN3), transcript variant 2, mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [pmid 9722614] [evidence IPI]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 9722614] [evidence IDA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 9722614] [evidence IDA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 9722614] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9722614] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9722614] [evidence IPI]	MGC111190; DCTN22; DCTN-22	MGC111190; DCTN22; DCTN-22
Homo sapiens	RefSeq	NR_000024.1	ILMN_164819	SNORD46	NR_000024.2	NR_000024.2		94161	94721322	NR_000024.2	SNORD46		ILMN_1682402	0004210044	S	17	GAATCCTTAGGCGTGGTTGTGGCCGTCTTGGTCACCTGTGTGCCACTTGC	1	+	45014767-45014816	1p34.1d	Homo sapiens small nucleolar RNA, C/D box 46 (SNORD46), small nucleolar RNA.				U46; RNU40; RNU46; U40	U40
Homo sapiens	RefSeq	NM_022648.3	ILMN_27797	TNS1	NM_022648.3	NM_022648.3		7145	66529406	NM_022648.3	TNS1	NP_072174.3	ILMN_1807919	0006250110	S	6954	TGTCACCCTTTCTGCCTTGGTTTCCCTAGCTGAGCCACGCTGCCCATGCA	2	-	218375994-218376043	2q35d	Homo sapiens tensin 1 (TNS1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17190795] [evidence IPI]	TNS; MGC88584	TNS; MGC88584
Homo sapiens	RefSeq	NM_014212.2	ILMN_10758	HOXC11	NM_014212.3	NM_014212.3		3227	84043954	NM_014212.3	HOXC11	NP_055027.1	ILMN_1697342	0003170521	S	1787	TTGAAGATTGGGGTGGTGGAGGCAGTAGGGAGATGGGATTGGGCACCTCC	12	+	52656220-52656269	12q13.13f	Homo sapiens homeobox C11 (HOXC11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IEA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [pmid 9582375] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9582375] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX3H; MGC4906	HOX3H; MGC4906
Homo sapiens	RefSeq	NM_000485.2	ILMN_4221	APRT	NM_000485.2	NM_000485.2		353	71773149	NM_000485.2	APRT	NP_000476.1	ILMN_1722491	0000160746	I	479	TGAGGTCCTGGAGTGCGTGAGCCTGGTGGAGCTGACCTCGCTTAAGGGCA	16	-	88876155-88876204	16q24.3a	Homo sapiens adenine phosphoribosyltransferase (APRT), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 457664] [evidence EXP]	Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IEA]; Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis [goid 6168] [evidence IEA]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IEA]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IEA]; Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis [goid 6168] [evidence IEA]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Interacting selectively with adenine, a purine base [goid 2055] [evidence IEA]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with adenine, a purine base [goid 2055] [evidence IEA]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [pmid 457664] [evidence EXP]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [pmid 3531209] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [pmid 15196008] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC125857; AMP; MGC125856; DKFZp686D13177; MGC129961	AMP; MGC125856; MGC129961; MGC125857; DKFZp686D13177
Homo sapiens	RefSeq	NM_001030018.1	ILMN_4221	APRT	NM_000485.2	NM_000485.2		353	71773149	NM_000485.2	APRT	NP_000476.1	ILMN_1726410	0006510603	A	339	TCCCTGGAGTACGGGAAGGCTGAGCTGGAGATTCAGAAAGACGCCCTGGA	16	-	88876524-88876556:88876831-88876847	16q24.3a	Homo sapiens adenine phosphoribosyltransferase (APRT), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 457664] [evidence EXP]	Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IEA]; Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis [goid 6168] [evidence IEA]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IEA]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IEA]; Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis [goid 6168] [evidence IEA]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Interacting selectively with adenine, a purine base [goid 2055] [evidence IEA]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with adenine, a purine base [goid 2055] [evidence IEA]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [pmid 457664] [evidence EXP]; Catalysis of the reaction: AMP + diphosphate = adenine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 3999] [pmid 3531209] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [pmid 15196008] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC125857; AMP; MGC125856; DKFZp686D13177; MGC129961	AMP; MGC125856; MGC129961; MGC125857; DKFZp686D13177
Homo sapiens	RefSeq	NM_005896.2	ILMN_14217	IDH1	NM_005896.2	NM_005896.2		3417	28178824	NM_005896.2	IDH1	NP_005887.2	ILMN_1696432	0003180048	S	1129	GATGGCAAGACAGTAGAAGCAGAGGCTGCCCACGGGACTGTAACCCGTCA	2	-	209104633-209104682	2q33.3d	Homo sapiens isocitrate dehydrogenase 1 (NADP+), soluble (IDH1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9866202] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9866202] [evidence TAS]; A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate [goid 6097] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle [goid 6102] [pmid 9866202] [evidence TAS]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle [goid 6102] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+ [goid 4450] [pmid 9866202] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+ [goid 4450] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]	PICD; IDH; IDP	PICD; IDH; IDP
Homo sapiens	RefSeq	NM_005896.2	ILMN_14217	IDH1	NM_005896.2	NM_005896.2		3417	28178824	NM_005896.2	IDH1	NP_005887.2	ILMN_2091347	0006270670	S	1870	CCTGTCCATGACCTTGGGCACAGGGAAGTTCTGGTGTCATAGATATCCCG	2	-	209101362-209101411	2q33.3d	Homo sapiens isocitrate dehydrogenase 1 (NADP+), soluble (IDH1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9866202] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9866202] [evidence TAS]; A modification of the TCA cycle occurring in some plants and microorganisms, in which isocitrate is cleaved to glyoxylate and succinate. Glyoxylate can then react with acetyl-CoA to form malate [goid 6097] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle [goid 6102] [pmid 9866202] [evidence TAS]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle [goid 6102] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+ [goid 4450] [pmid 9866202] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+ [goid 4450] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]	PICD; IDH; IDP	PICD; IDH; IDP
Homo sapiens	RefSeq	NM_015423.2	ILMN_25075	AASDHPPT	NM_015423.2	NM_015423.2		60496	20357567	NM_015423.2	AASDHPPT	NP_056238.2	ILMN_2096191	0007040717	S	2396	GTCAGTATTGTTATTGGCTTTTCGTATTCCTCTTAACGTGAACCGTCTGT	11	+	105474164-105474213	11q22.3b	Homo sapiens aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase (AASDHPPT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12815048] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass [goid 9059] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form [goid 8897] [evidence IEA]; Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form [goid 8897] [pmid 12815048] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp566E2346; CGI-80; LYS2; AASD-PPT; LYS5	DKFZp566E2346; CGI-80; LYS2; AASD-PPT; LYS5
Homo sapiens	RefSeq	NM_015423.2	ILMN_25075	AASDHPPT	NM_015423.2	NM_015423.2		60496	20357567	NM_015423.2	AASDHPPT	NP_056238.2	ILMN_1698189	0006060767	S	1986	GAAGCTAAGCTAGGTGTGAAGAATGGAATTGGAAGCCCACTGCCTTCCCA	11	+	105473754-105473803	11q22.3b	Homo sapiens aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase (AASDHPPT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12815048] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass [goid 9059] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form [goid 8897] [evidence IEA]; Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form [goid 8897] [pmid 12815048] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp566E2346; CGI-80; LYS2; AASD-PPT; LYS5	DKFZp566E2346; CGI-80; LYS2; AASD-PPT; LYS5
Homo sapiens	RefSeq	NM_001032393.1	ILMN_12101	HNRNPH2	NM_001032393.1	NM_001032393.1		3188	74099696	NM_001032393.1	HNRNPH2	NP_001027565.1	ILMN_1781764	0004150059	A	1491	CAGTCAAACCTTGCTTAGGTAGAGAAGGAGCACTAAATAGCTACTCCAGA	X	+	100554965-100554982:100554983-100555014	Xq22.1c	Homo sapiens heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7499401] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 7499401] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7499401] [evidence TAS]	HNRPH'; FTP3; hnRNPH'	HNRPH'; FTP3; hnRNPH'
Homo sapiens	RefSeq	NM_001002000.1	ILMN_10003	GMPR2	NM_001002000.1	NM_001002000.1		51292	50541951	NM_001002000.1	GMPR2	NP_001002000.1	ILMN_2365595	0005090392	A	1783	GCTGATTGGTACATAAATCTTTTACATGGCCTTGGTCTAGAGGAGGCAGG	14	+	23778119-23778168	14q12a	Homo sapiens guanosine monophosphate reductase 2 (GMPR2), transcript variant 2, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Catalysis of the reaction: inosine 5'-phosphate + NH3 + NADP+ = guanosine 5'-phosphate + NADPH + H+ [goid 3920] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NH3 + NADP+ = guanosine 5'-phosphate + NADPH + H+ [goid 3920] [evidence IEA]	MGC15084; MGC830	MGC15084; MGC830
Homo sapiens	RefSeq	NM_001024809.2	ILMN_29880	RARA	NM_001024809.2	NM_001024809.2		5914	75812905	NM_001024809.2	RARA	NP_001019980.1	ILMN_1791902	0007550520	I	729	TCCGTACTCCACCCCGCTCCGGACTCCGCTTTGGAATGGCTCAAACCACT	17	+	35752596-35752645	17q21.2a	Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 2825025] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2825025] [evidence IDA]; Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [pmid 15831516] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [pmid 15831516] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 17538076] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [pmid 18416830] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-13 production [goid 32736] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-4 production [goid 32753] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-5 production [goid 32754] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation [goid 45630] [pmid 18416830] [evidence IDA]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [pmid 17538076] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid [goid 1972] [pmid 2825025] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2825025] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10866662] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16432238] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17560333] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR1B1; RAR	NR1B1; RAR
Homo sapiens	Unigene	Hs.149514	ILMN_78856	HS.149514	Hs.149514		Hs.149514		27878329	BX111027			ILMN_1824784	0004830563	S	278	TCCAAGCTTATTCAGCCAGGGAACCTCTTCATCCAGGGCCCCACAGAGGG	3	-	11189603-11189652		BX111027 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGp998H094605, mRNA sequence					
Homo sapiens	RefSeq	NM_015073.1	ILMN_162393	SIPA1L3	NM_015073.1	NM_015073.1		23094	71143118	NM_015073.1	SIPA1L3	NP_055888.1	ILMN_1765872	0000840626	S	7557	AGCTACTGTGATGCCATCTTCTCCCCCATCCCCTTCTCTGGGGGGCCCAC	19	+	38698582-38698631	19q13.13a-q13.13d	Homo sapiens signal-induced proliferation-associated 1 like 3 (SIPA1L3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SPAL3	SPAL3
Homo sapiens	RefSeq	XM_932518.1	ILMN_45074	LOC644923	XM_932518.1	XM_932518.1		644923	89029964	XM_932518.1	LOC644923	XP_937611.1	ILMN_1791242	0001780672	S	255	GACGCTCCCTGAGTGGCGACTCCGTCTCCAGCCCCGCTGCGGAGCGCGGG	9	-	112840500-112840549		PREDICTED: Homo sapiens hypothetical protein LOC644923 (LOC644923), mRNA.					
Homo sapiens	RefSeq	NM_001030060.1	ILMN_18130	SAMD5	NM_001030060.1	NM_001030060.1		389432	71834345	NM_001030060.1	SAMD5	NP_001025231.1	ILMN_1755215	0004780735	S	5797	TTTCTGCCCCTACAGAAGTGTGTGCATGGGCCTTGGAAAATCTACATGTG	6	+	147890404-147890453	6q24.3b	Homo sapiens sterile alpha motif domain containing 5 (SAMD5), mRNA.				dJ875H10.1	dJ875H10.1
Homo sapiens	RefSeq	NR_003692.1	ILMN_346121	SNORD124	NR_003692.1	NR_003692.1		100113390	154800505	NR_003692.1	SNORD124		ILMN_3235154	0005050685	S	9	AGGAAGGGATGATGTTCCAGTTGAGACTCAAGAAAAGGATTCTGAGCCTC	17	-	35437366-35437415	17q21.1a	Homo sapiens small nucleolar RNA, C/D box 124 (SNORD124), non-coding RNA.					
Homo sapiens	RefSeq	NM_153233.1	ILMN_41808	C19ORF46	NM_001039876.1	NM_001039876.1		163183	89886474	NM_001039876.1	C19orf46	NP_001034965.1	ILMN_1801697	0001850201	S	1230	TGCTGCTCTCATGCCCGAATACCCAGGACACCCTACCTGGTGCTCAGCTA	19	-	41186103-41186152	19q13.12a	Homo sapiens chromosome 19 open reading frame 46 (C19orf46), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	FLJ36445	
Homo sapiens	RefSeq	NM_003940.2	ILMN_371176	USP13	NM_003940.2	NM_003940.2		8975	215598687	NM_003940.2	USP13	NP_003931.2	ILMN_3251526	0003990075	S	7681	CACTGCACAAATCCTGCCACTCTTGATGTGCCGCTTGTCTCAGCCTTGGC	3	+	179506937-179506986	3q26.33a	Homo sapiens ubiquitin specific peptidase 13 (isopeptidase T-3) (USP13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 9827704] [evidence TAS]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_005475.1	ILMN_5130	SH2B3	NM_005475.1	NM_005475.1		10019	4885454	NM_005475.1	SH2B3	NP_005466.1	ILMN_1752046	0006560301	S	5059	AAGGCCTTGGACTCTTCCCTGAGGGTTGCCTGAAATTCCTTCATGCTTTC	12	+	110373463-110373512	12q24.12a	Homo sapiens SH2B adaptor protein 3 (SH2B3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LNK	LNK
Homo sapiens	RefSeq	NR_030624.1	ILMN_388158	MIR208B	NR_030624.1	NR_030624.1		100126336	262206183	NR_030624.1	MIR208B		ILMN_3309814	0004280270	S	27	TATGTTTCTGATCCGAATATAAGACGAACAAAAGGTTTGTCTGAGGGCAG				14q11.2f	Homo sapiens microRNA 208b (MIR208B), microRNA.					
Homo sapiens	RefSeq	NM_015477.1	ILMN_14108	SIN3A	NM_015477.1	NM_015477.1		25942	23397665	NM_015477.1	SIN3A	NP_056292.1	ILMN_1805996	0006420017	S	4683	CCTTGCTGCCTACCCTTTTCTCTCCTCTGGTTCTCAACCTCAACGAGTTC	15	-	73450721-73450770	15q24.2a	Homo sapiens SIN3 homolog A, transcription regulator (yeast) (SIN3A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11238380] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12670868] [evidence IPI]	FLJ90319; KIAA0700; DKFZP434K2235	FLJ90319; KIAA0700; DKFZP434K2235
Homo sapiens	RefSeq	XR_038272.1	ILMN_345516	LOC100133555	XR_038272.1	XR_038272.1		100133555	169217891	XR_038272.1	LOC100133555		ILMN_3244079	0006550524	S	504	GGCGCCGGGGGTGGAGAACCGCAGTCAAATCCTCTTCTTCCCCGCGCACC					PREDICTED: Homo sapiens misc_RNA (LOC100133555), miscRNA.					
Homo sapiens	RefSeq	NM_152408.1	ILMN_6243	C5ORF37	NM_152408.1	NM_152408.1		134359	22748864	NM_152408.1	C5orf37	NP_689621.1	ILMN_2225577	0001070474	S	1584	CCCCGGACCATTCATCCTGAAAGTAGTACCTCAGCTTCCAGATCACTTGG	5	-	75006076-75006125	5q13.3c	Homo sapiens chromosome 5 open reading frame 37 (C5orf37), mRNA.			Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	MGC120443; MGC120444; FLJ35779; MGC120442	MGC120443; FLJ35779; MGC120442; MGC120444
Homo sapiens	RefSeq	NM_006153.3	ILMN_13975	NCK1	NM_006153.3	NM_006153.3		4690	33519482	NM_006153.3	NCK1	NP_006144.1	ILMN_1698001	0003800544	S	1414	CAGTGCATCTGCATAGAACAGTTCCTTATCCTTGGCCTTCTGTTTTATTG	3	+	136667468-136667517	3q22.3a	Homo sapiens NCK adaptor protein 1 (NCK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12110186] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [pmid 12110186] [evidence NAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [pmid 12110186] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [pmid 12110186] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 12110186] [evidence IMP]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 12110186] [evidence IPI]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 12110186] [evidence NAS]; Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [pmid 12110186] [evidence NAS]	MGC12668; NCKalpha; NCK	MGC12668; NCKalpha; NCK
Homo sapiens	RefSeq	NM_147173.1	ILMN_4869	NUDT2	NM_147173.1	NM_147173.1		318	22219466	NM_147173.1	NUDT2	NP_671702.1	ILMN_2349444	0002510324	A	669	CTTTGCTCCATAGAGGCCTGAGCTGACTGGAGCAGAGTCATTTGCTTCAG	9	+	34333324-34333373	9p13.3c	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 2 (NUDT2), transcript variant 3, mRNA.		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 7487923] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10452553] [evidence ISS]	Catalysis of the reaction: P(1),P(4)-bis(5'-nucleosyl)tetraphosphate + H2O = NTP + NMP. Acts on bis(5'-guanosyl)-, bis(5'-xanthosyl)-, bis(5'-adenosyl)- and bis(5'-uridyl)-tetraphosphate [goid 4081] [pmid 11738085] [evidence ISS]; Catalysis of the reaction: P(1),P(4)-bis(5'-nucleosyl)tetraphosphate + H2O = 2 NDP [goid 8803] [pmid 7487923] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	APAH1; MGC10404	APAH1; MGC10404
Homo sapiens	RefSeq	NM_147173.1	ILMN_4869	NUDT2	NM_147173.1	NM_147173.1		318	22219466	NM_147173.1	NUDT2	NP_671702.1	ILMN_1778347	0002750035	A	729	GTGGGCCTTCTAAGATGAAGCCACCCTCAGGTCCAGGGAAGGTTGTGCTG	9	+	34333384-34333433	9p13.3c	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 2 (NUDT2), transcript variant 3, mRNA.		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 7487923] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10452553] [evidence ISS]	Catalysis of the reaction: P(1),P(4)-bis(5'-nucleosyl)tetraphosphate + H2O = NTP + NMP. Acts on bis(5'-guanosyl)-, bis(5'-xanthosyl)-, bis(5'-adenosyl)- and bis(5'-uridyl)-tetraphosphate [goid 4081] [pmid 11738085] [evidence ISS]; Catalysis of the reaction: P(1),P(4)-bis(5'-nucleosyl)tetraphosphate + H2O = 2 NDP [goid 8803] [pmid 7487923] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	APAH1; MGC10404	APAH1; MGC10404
Homo sapiens	Unigene	Hs.540009	ILMN_104895	HS.540009	Hs.540009		Hs.540009		5593151	AI887987			ILMN_1855291	0000360398	S	30	GGTTCAACCCTGCTTTAAGATGGAAGGAAGACGGGAGGCGGGGTTTCAGA	14	-	49499121-49499170		wm27b06.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:2437139 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005311.3	ILMN_2830	GRB10	NM_005311.3	NM_005311.3		2887	48762678	NM_005311.3	GRB10	NP_005302.3	ILMN_2340919	0005960725	A	4039	GGCCTCGCGCTGGGCGGCTGGGAATTCCACCTGAGAACAAGTCCCGCAAA	7	-	50625870-50625919	7p12.2a	Homo sapiens growth factor receptor-bound protein 10 (GRB10), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9006901] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9006901] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9006901] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 9006901] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9006901] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8798570] [evidence IPI]	RSS; GRB-IR; IRBP; KIAA0207; Grb-10; MEG1	RSS; GRB-IR; IRBP; KIAA0207; Grb-10; MEG1
Homo sapiens	RefSeq	NM_000461.2	ILMN_3670	THRB	NM_000461.3	NM_000461.3		7068	82546876	NM_000461.3	THRB	NP_000452.2	ILMN_1696683	0004180458	S	1434	CCCGGGGCTTGCCTGTGTTGAGAGAATAGAAAAGTACCAAGATAGTTTCC	3	-	24139566-24139615	3p24.2b	Homo sapiens thyroid hormone receptor, beta (erythroblastic leukemia viral (v-erb-a) oncogene homolog 2, avian) (THRB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1618799] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1618799] [evidence NAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 1618799] [evidence TAS]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [pmid 1618799] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7870181] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15100213] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15625236] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	THR1; MGC126109; MGC126110; THRB1; GRTH; ERBA-BETA; ERBA2; THRB2; NR1A2	THR1; MGC126109; MGC126110; THRB1; GRTH; ERBA-BETA; ERBA2; THRB2; NR1A2
Homo sapiens	RefSeq	NM_152653.1	ILMN_29196	UBE2E2	NM_152653.2	NM_152653.2		7325	142378343	NM_152653.2	UBE2E2	NP_689866.1	ILMN_1707475	0005270021	S	1323	GAGACTCTGTTTATCACTAGCCTTCTGTCCCTCCCGCAGAAGACTGTTGG	3	+	23606887-23606936	3p24.3a	Homo sapiens ubiquitin-conjugating enzyme E2E 2 (UBC4/5 homolog, yeast) (UBE2E2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent addition to a protein of ISG15, a ubiquitin-like protein [goid 32020] [pmid 16428300] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the covalent attachment of the ubiquitin-like protein ISG15 to other proteins [goid 42296] [pmid 16428300] [evidence IDA]	UBCH8; FLJ25157	UBCH8; FLJ25157
Homo sapiens	RefSeq	NM_014345.1	ILMN_29701	ZNF318	NM_014345.1	NM_014345.1		24149	7657183	NM_014345.1	ZNF318	NP_055160.1	ILMN_1792305	0000050193	S	7818	GAACTCATTCCCTGTTCCACAAACCCATATGTATCCTTTCCTCAACCTCC	6	-	43411924-43411973	6p21.1d	Homo sapiens zinc finger protein 318 (ZNF318), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZFP318; TZF; HRIHFB2436	ZFP318; TZF; HRIHFB2436
Homo sapiens	RefSeq	NM_015364.2	ILMN_25195	LY96	NM_015364.2	NM_015364.2		23643	34098964	NM_015364.2	LY96	NP_056179.1	ILMN_1724533	0000070167	S	505	TGGGAGCCCAGAAGAAATGCTCTTTTGCTTGGAGTTTGTCATCCTACACC	8	+	75103777-75103826	8q21.11a	Homo sapiens lymphocyte antigen 96 (LY96), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10359581] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14625308] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14556004] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12447442] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16024789] [evidence EXP]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 10359581] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10359581] [evidence TAS]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 10359581] [evidence TAS]	MD-2	MD-2
Homo sapiens	RefSeq	NR_024478.1	ILMN_369858	LOC100132354	NR_024478.1	NR_024478.1		100132354	213511996	NR_024478.1	LOC100132354		ILMN_3235046	0004920220	S	1936	AGACTGCAGCTCCCTTAGTCAGTGTTGTGTCCTCCACTCAGGCTGGGGCT	6	+	43905598-43905647	6p21.1c	Homo sapiens hypothetical LOC100132354 (LOC100132354), non-coding RNA.					
Homo sapiens	RefSeq	XM_001133863.1	ILMN_176193	LOC729737	XM_001133863.1	XM_001133863.1		729737	113402449	XM_001133863.1	LOC729737	XP_001133863.1	ILMN_3249449	0007380551	S	82	GGATTACAGGTAAGTGCCACCACACCCAGCTGATTTTTGTGTTTTTTGTA	1	-	134210-134259	1p36.33b	PREDICTED: Homo sapiens hypothetical LOC729737 (LOC729737), mRNA.					
Homo sapiens	RefSeq	NM_183004.3	ILMN_17164	EIF5	NM_183004.3	NM_183004.3		1983	37537715	NM_183004.3	EIF5	NP_892116.2	ILMN_1657769	0006550035	I	209	AGCCTGGCGTTCGCTCGCGCTCTCTTGCTTAATGGCAAATTGTGGGCGAG	14	+	102871197-102871246	14q32.32b	Homo sapiens eukaryotic translation initiation factor 5 (EIF5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8663286] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8663286] [evidence NAS]	Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 8663286] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 8663286] [evidence NAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8663286] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	EIF-5A	EIF-5A
Homo sapiens	RefSeq	NM_001023.2	ILMN_2448	RPS20	NM_001023.2	NM_001023.2		6224	14591915	NM_001023.2	RPS20	NP_001014.1	ILMN_1701596	0003360228	S	114	CGCGCGCAACAGCCATGGCTTTTAAGGATACCGGAAAAACACCCGTGGAG	8	-	57149239-57149272:57149494-57149496:57149497-57149509	8q12.1b	Homo sapiens ribosomal protein S20 (RPS20), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8479924] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8479924] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17373842] [evidence IPI]	MGC102930; FLJ27451	MGC102930; FLJ27451
Homo sapiens	RefSeq	NM_032377.2	ILMN_2969	ELOF1	NM_032377.3	NM_032377.3		84337	85062625	NM_032377.3	ELOF1	NP_115753.1	ILMN_1723185	0000630709	S	692	GGCGGAATTGGGGGACTGTTTCCTGACATCCTGGACAAGGGAAGCCCACT	19	-	11664135-11664184	19p13.2a	Homo sapiens elongation factor 1 homolog (S. cerevisiae) (ELOF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ELF1	MGC4549
Homo sapiens	RefSeq	NM_024303.1	ILMN_21985	ZSCAN5A	NM_024303.1	NM_024303.1		79149	13236531	NM_024303.1	ZSCAN5A	NP_077279.1	ILMN_1675007	0001410735	S	1742	GCAAGGGCGTCTGACACACAGAGGGAGTGCCCTAGATATGAATTGCCAGG	19	-	61424621-61424670	19q13.43a	Homo sapiens zinc finger and SCAN domain containing 5A (ZSCAN5A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF495; MGC4161	ZNF495; MGC4161
Homo sapiens	RefSeq	NM_199250.1	ILMN_17977	C19ORF48	NM_199250.1	NM_199250.1		84798	40548383	NM_199250.1	C19orf48	NP_954858.1	ILMN_2383484	0002650349	A	894	CCACACACCCAGGAGAAGGTGGATAAGTGGGCTACCAAGGGCTTCCTGCA	19	-	55993333-55993382	19q13.33c	Homo sapiens chromosome 19 open reading frame 48 (C19orf48), mRNA.				MGC13170	MGC13170
Homo sapiens	RefSeq	NM_199249.1	ILMN_17977	C19ORF48	NM_199250.1	NM_199250.1		84798	40548383	NM_199250.1	C19orf48	NP_954858.1	ILMN_1759184	0002850630	A	1449	GCAGGCCAAGCAGGGCAACCCCACACCCTTGACATAAAAGCATCTTGAAG	19	-	55992778-55992827	19q13.33c	Homo sapiens chromosome 19 open reading frame 48 (C19orf48), mRNA.				MGC13170	MGC13170
Homo sapiens	RefSeq	NM_001029946.1	ILMN_178115	BCL2L15	NM_001010922.2	NM_001010922.2		440603	121949805	NM_001010922.2	BCL2L15	NP_001010922.1	ILMN_1655722	0001710575	A	220	CACTCTACTCATGGACTTCTTGAGCCCAACATTGCAGGTTGCCAGCCGGA	1	-	114429900-114429949	1p13.2b	Homo sapiens BCL2-like 15 (BCL2L15), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Bfk; C1orf178; FLJ22588	FLJ22588; Bfk
Homo sapiens	RefSeq	NM_001010922.2	ILMN_178115	BCL2L15	NM_001010922.2	NM_001010922.2		440603	121949805	NM_001010922.2	BCL2L15	NP_001010922.1	ILMN_3251676	0000780754	S	4596	CCGAGCCAGTCACTAAAGCTGCCCTCCTCCTACTGTTCCCTATGTTTCAT	1	-	114419763-114419812	1p13.2b	Homo sapiens BCL2-like 15 (BCL2L15), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Bfk; C1orf178; FLJ22588	FLJ22588; Bfk; C1orf178
Homo sapiens	RefSeq	NM_001010922.1	ILMN_178115	BCL2L15	NM_001010922.2	NM_001010922.2		440603	121949805	NM_001010922.2	BCL2L15	NP_001010922.1	ILMN_1694666	0000110747	I	112	CCTGCTGGGCTGAAAACTGCTTGTTTCGTGGAAAAGCAAAACTTGACAGC	1	-	114430008-114430057	1p13.2b	Homo sapiens BCL2-like 15 (BCL2L15), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		Bfk; C1orf178; FLJ22588	FLJ22588; Bfk
Homo sapiens	RefSeq	NM_000080.2	ILMN_20949	CHRNE	NM_000080.2	NM_000080.2		1145	38327653	NM_000080.2	CHRNE	NP_000071.1	ILMN_1703346	0005260451	S	2064	ACTCATTGCAGATCCCAGCCCACCCTGCCCCTTTCTTCCCCACCCTGGAG	17	-	4801410-4801459	17p13.2b	Homo sapiens cholinergic receptor, nicotinic, epsilon (CHRNE), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 7531341] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8872460] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8872460] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [pmid 8872460] [evidence TAS]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]	 [goid 4889] [pmid 7531341] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [pmid 8872460] [evidence TAS]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [pmid 8872460] [evidence TAS]	ACHRE; FCCMS; CMS1E; CMS1D; CMS2A; SCCMS	ACHRE; FCCMS; CMS1E; CMS1D; CMS2A; SCCMS
Homo sapiens	RefSeq	NM_006603.4	ILMN_14082	STAG2	NM_006603.4	NM_006603.4		10735	112789533	NM_006603.4	STAG2	NP_006594.3	ILMN_2333708	0002450100	A	5838	CCTACAGTATGTTGTATGTTTTCTCTTGTACTCAAAGGGGGAGGGTGGCT	X	+	123064022-123064071	Xq25b-q25c	Homo sapiens stromal antigen 2 (STAG2), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9305759] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 9305759] [evidence ND ]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15855230] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZp686P168; DKFZp781H1753; SA-2; bA517O1.1; FLJ25871; SA2	DKFZp686P168; DKFZp781H1753; SA-2; bA517O1.1; SA2
Homo sapiens	RefSeq	XM_001714245.1	ILMN_339334	LOC100133409	XM_001714245.1	XM_001714245.1		100133409	169172021	XM_001714245.1	LOC100133409	XP_001714297.1	ILMN_3239121	0000060608	S	21	CCAGTCAGCATTAGTTCTGCTTTACATAAGATTTGAAGCCTCGTGCCAAG					PREDICTED: Homo sapiens similar to actin-related protein 3-beta (LOC100133409), mRNA.					
Homo sapiens	RefSeq	NM_004719.2	ILMN_183346	SFRS2IP	NM_004719.2	NM_004719.2		9169	117676383	NM_004719.2	SFRS2IP	NP_004710.2	ILMN_2069593	0004010445	S	4246	CTGCTCCGACAGCAGCCCCAGGAAATACGGGAATGGTTCAGGGACCAAGT	12	-	46316835-46316884	12q12h-q13.11a	Homo sapiens splicing factor, arginine/serine-rich 2, interacting protein (SFRS2IP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 9224939] [evidence TAS]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9447963] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 9447963] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9447963] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9447963] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9447963] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	SIP1; CASP11; SRRP129	SIP1; CASP11; SRRP129
Homo sapiens	RefSeq	NM_004719.2	ILMN_183346	SFRS2IP	NM_004719.2	NM_004719.2		9169	117676383	NM_004719.2	SFRS2IP	NP_004710.2	ILMN_3251511	0000780010	S	7410	GGCCACAGTGTGTACTGCTGGAATGTTCCATCCAAAAGATGTAGCTTCAG	12	-	46313050-46313099	12q12h-q13.11a	Homo sapiens splicing factor, arginine/serine-rich 2, interacting protein (SFRS2IP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 9224939] [evidence TAS]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9447963] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 9447963] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9447963] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9447963] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9447963] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	SIP1; CASP11; SRRP129	SIP1; CASP11; SRRP129
Homo sapiens	RefSeq	NM_025217.2	ILMN_27661	ULBP2	NM_025217.2	NM_025217.2		80328	20070345	NM_025217.2	ULBP2	NP_079493.1	ILMN_3238676	0004490356	S	859	TCCTGTGAGCACGGTCTTGATCAAACTCGCCCTTCTGTCTGGCCAGCTGC	6	+	150269881-150269930	6q25.1b	Homo sapiens UL16 binding protein 2 (ULBP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [pmid 11239445] [evidence NAS]	Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 11239445] [evidence NAS]	RAET1H; N2DL2	RAET1H; N2DL2
Homo sapiens	RefSeq	NM_001128077.1	ILMN_365676	KRTAP20-3	NM_001128077.1	NM_001128077.1		337985	189303553	NM_001128077.1	KRTAP20-3	NP_001121549.1	ILMN_3309114	0000430736	S	23	CAATGAGCTACTATGGCAACTACTACGGAGGACTGGGCTATGGCTATGAC	21	+	32015205-32015207:32015208-32015254	21q22.11a	Homo sapiens keratin associated protein 20-3 (KRTAP20-3), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]				
Homo sapiens	RefSeq	NM_014421.2	ILMN_20007	DKK2	NM_014421.2	NM_014421.2		27123	54792134	NM_014421.2	DKK2	NP_055236.1	ILMN_2194688	0004900050	S	3160	CCCATCTGCAGTCTCAAATTTAAGTTCTCCCAGTAGAGATTGAGTTTGAG	4	-	108062835-108062884	4q25a	Homo sapiens dickkopf homolog 2 (Xenopus laevis) (DKK2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10570958] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]		DKK-2	DKK-2
Homo sapiens	RefSeq	NM_014421.2	ILMN_20007	DKK2	NM_014421.2	NM_014421.2		27123	54792134	NM_014421.2	DKK2	NP_055236.1	ILMN_1695506	0002140441	S	2784	CACAAAATGGACTCCTGAAGTAGACAGAGTAGTGAGGTTTCATTGCCCTC	4	-	108063211-108063260	4q25a	Homo sapiens dickkopf homolog 2 (Xenopus laevis) (DKK2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10570958] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]		DKK-2	DKK-2
Homo sapiens	RefSeq	NM_033196.2	ILMN_21081	ZNF682	NM_033196.2	NM_033196.2		91120	116284400	NM_033196.2	ZNF682	NP_149973.1	ILMN_2242998	0002450477	I	28	TAGTTCCCGGTGACTGTCGCAGCCTCTGTTGCCCTCTGACTTGCAGATGC	19	-	20150200-20150249	19p12d	Homo sapiens zinc finger protein 682 (ZNF682), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ90362; BC39498_3	FLJ90362; BC39498_3
Homo sapiens	RefSeq	NM_033196.1	ILMN_21081	ZNF682	NM_033196.2	NM_033196.2		91120	116284400	NM_033196.2	ZNF682	NP_149973.1	ILMN_1807263	0000070519	S	1084	GCCTTTAACCACTGCTCACTACTTACTATACATGAGAGAACCCATACGGG	19	-	20117300-20117349	19p12d	Homo sapiens zinc finger protein 682 (ZNF682), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ90362; BC39498_3	FLJ90362; BC39498_3
Homo sapiens	RefSeq	NM_033196.2	ILMN_21081	ZNF682	NM_033196.2	NM_033196.2		91120	116284400	NM_033196.2	ZNF682	NP_149973.1	ILMN_2313889	0003440431	A	2316	AGGCGGATCACGAGGTCAGGAGATCGAGACCACGATGAAACCCTGTCTCT	19	-	20116068-20116117	19p12d	Homo sapiens zinc finger protein 682 (ZNF682), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ90362; BC39498_3	FLJ90362; BC39498_3
Homo sapiens	RefSeq	NM_000514.2	ILMN_19376	GDNF	NM_000514.2	NM_000514.2		2668	40549401	NM_000514.2	GDNF	NP_000505.1	ILMN_1662492	0006350411	I	99	GGATGGGTCTCCTGGCTGGGACTTGGGGCACCTGGAGTTAATGTCCAACC	5	-	37875391-37875440	5p13.2a	Homo sapiens glial cell derived neurotrophic factor (GDNF), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9811930] [evidence IDA]	The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [pmid 15242795] [evidence IDA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; The maintenance of membrane composition in a postsynaptic membrane, the specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft) [goid 1941] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 7830769] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7830769] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8637574] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [pmid 15242795] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [pmid 8493557] [evidence IDA]; Any process that modulates the frequency, rate or extent of the directed movement of the catecholamine neurotransmitter dopamine into a cell [goid 51584] [pmid 8493557] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8988018] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8493557] [evidence IDA]	HFB1-GDNF; ATF1; ATF2	HFB1-GDNF; ATF1; ATF2
Homo sapiens	RefSeq	NR_024103.1	ILMN_364030	C17ORF93	NR_024103.1	NR_024103.1		360205	197209877	NR_024103.1	C17orf93		ILMN_3236709	0002940072	S	14	TCCCCTCTTCCCTGGAGAGCGACTGTTCGGGAGGGTGAGAATGGTATAAA	17	+	46800555-46800604		Homo sapiens chromosome 17 open reading frame 93 (C17orf93), non-coding RNA.					
Homo sapiens	RefSeq	NM_001042470.1	ILMN_164657	SUMF2	NM_001042470.1	NM_001042470.1		25870	110227852	NM_001042470.1	SUMF2	NP_001035935.2	ILMN_2345872	0006110253	A	1728	GGAGAGTAGCCTGCTCCCACACTGTCACTGGATGTCATGGGGCCAATAAA	7	+	56115785-56115834	7p11.2b	Homo sapiens sulfatase modifying factor 2 (SUMF2), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	pFGE; DKFZp566I1024; MGC99485; DKFZp781L1035; DKFZp66I1024; DKFZp686L17160	pFGE; DKFZp566I1024; MGC99485; DKFZp781L1035; DKFZp66I1024; DKFZp686L17160
Homo sapiens	RefSeq	NM_015411.1	ILMN_164657	SUMF2	NM_001042470.1	NM_001042470.1		25870	110227852	NM_001042470.1	SUMF2	NP_001035935.2	ILMN_1685371	0002680474	S	1275	GTTCAGTCCTAAAAGGGTCTGGGAGAACCAGATGATGTACTAGGTGAAGC	7	+	56115332-56115381	7p11.2b	Homo sapiens sulfatase modifying factor 2 (SUMF2), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	pFGE; DKFZp566I1024; MGC99485; DKFZp781L1035; DKFZp66I1024; DKFZp686L17160	MGC99485; DKFZp66I1024
Homo sapiens	RefSeq	XM_498696.2	ILMN_40150	LOC440491	XM_943271.2	XM_943271.2		440491	113427935	XM_943271.2	LOC440491	XP_948364.2	ILMN_1797098	0004860564	A	570	CGCGGGTTGTGACCTTTGAAGAGAAATGCCGTAGAAGCATGGACGTGGCT				18q12.1e	PREDICTED: Homo sapiens hypothetical LOC440491 (LOC440491), mRNA.					
Homo sapiens	RefSeq	XM_935741.1	ILMN_30716	LOC442299	XM_935741.1	XM_935741.1		442299	89026873	XM_935741.1	LOC442299	XP_940834.1	ILMN_1710876	0002470709	S	540	GCACCAGGGTCACCCCAACCAGGATAACCGGACCGTCAGCCAGATCCTGA					PREDICTED: Homo sapiens similar to capicua homolog (LOC442299), mRNA.					
Homo sapiens	RefSeq	NM_006634.2	ILMN_20179	VAMP5	NM_006634.2	NM_006634.2		10791	31543930	NM_006634.2	VAMP5	NP_006625.1	ILMN_1809467	0002630195	S	332	CATCCTGATTGTGCTGCTGGTCGTCTTTCTCCCTCAGAGCAGTGACAGCA	2	+	85673689-85673738	2p11.2f	Homo sapiens vesicle-associated membrane protein 5 (myobrevin) (VAMP5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9725904] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9725904] [evidence TAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		MYOBREVIN	MYOBREVIN
Homo sapiens	RefSeq	NM_022086.6	ILMN_22494	ELMO2	NM_182764.1	NM_182764.1		63916	33469946	NM_182764.1	ELMO2	NP_877496.1	ILMN_1778168	0003180253	A	2369	AGTGATTTTGGTGGCCAGTAAATGCCAGCCATTTCTCAAACCCACCTCGG	20	-	44995849-44995898	20q13.12c	Homo sapiens engulfment and cell motility 2 (ELMO2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ11656; CED12; CED-12; KIAA1834; ELMO-2	FLJ11656; CED12; KIAA1834; ELMO-2
Homo sapiens	RefSeq	XR_016518.2	ILMN_162555	LOC400347	XR_016518.2	XR_016518.2		400347	169208147	XR_016518.2	LOC400347		ILMN_3294263	0005490154	M	871	GTGAGTCCTAAAGGGGAGGAGAGCGTGGCCGCCCGTGTATCCATCATGAA	15	-	29532827-29532876	15q13.3a	PREDICTED: Homo sapiens misc_RNA (LOC400347), miscRNA.					
Homo sapiens	RefSeq	XR_019592.2	ILMN_171301	LOC729779	XR_019592.2	XR_019592.2		729779	169161619	XR_019592.2	LOC729779		ILMN_3305273	0007560364	M	772	CACGCCTCCATGTTTCAGCATCTATGTCATGGGCTTGGTCCTGGAGTGGA				1p31.1d	PREDICTED: Homo sapiens misc_RNA (LOC729779), miscRNA.					
Homo sapiens	RefSeq	NR_004390.1	ILMN_352385	SNORA57	NR_004390.1	NR_004390.1		692158	161087010	NR_004390.1	SNORA57		ILMN_3235404	0004850711	S	90	ATGTCTTCGGTGCTGGCGGCTTCCCATCCGCTGGTTCTATCCTCAAACGC	11	+	62432983-62433032		Homo sapiens small nucleolar RNA, H/ACA box 57 (SNORA57), small nucleolar RNA.				U99	U99
Homo sapiens	RefSeq	XR_037560.1	ILMN_337501	LOC641922	XR_037560.1	XR_037560.1		641922	169170922	XR_037560.1	LOC641922		ILMN_3278642	0006380594	M	1952	AACTCCCCGGCCAAGCACAGGGGTTCGAAAATACAGCTGATACCCCGCGG	7	-	6861390-6861439	7p22.1a	PREDICTED: Homo sapiens misc_RNA (LOC641922), miscRNA.					
Homo sapiens	Unigene	Hs.538804	ILMN_104131	HS.538804	Hs.538804		Hs.538804		12302566	BF911108			ILMN_1914034	0005860438	S	3	GAGGGGACTGAAGAGTACTAGTGGGGAGAAATAAAGGGGATTCAAACATT	11	-	101758671-101758694:101758697-101758713:101758715-101758723		PM1-UT0061-061100-010-b01 UT0061 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_080794.2	ILMN_2587	MRPL39	NM_080794.2	NM_080794.2		54148	27886569	NM_080794.2	MRPL39	NP_542984.2	ILMN_1778730	0004810246	I	1010	TACTACGCAGTCATTCTTCACTACCTCGCCTGAGTCGTACCTCCTCCATG	21	-	25881896-25881945	21q21.3a	Homo sapiens mitochondrial ribosomal protein L39 (MRPL39), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [pmid 11167009] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PRED66; FLJ20451; MGC104174; MRP-L5; RPML5; C21orf92; MGC3400; L39mt; PRED22; MSTP003	PRED66; FLJ20451; MGC104174; MRP-L5; RPML5; C21orf92; MGC3400; L39mt; PRED22; MSTP003
Homo sapiens	RefSeq	XM_001714415.1	ILMN_349852	LOC100134384	XM_001714415.1	XM_001714415.1		100134384	169204996	XM_001714415.1	LOC100134384	XP_001714467.1	ILMN_3247370	0006940228	S	11	TGATGGAAAATCATTTCTGGGAGGTGGAGGCCATGGCTCGAATGGCTGCC					PREDICTED: Homo sapiens similar to coiled-coil domain containing 63 (LOC100134384), mRNA.					
Homo sapiens	RefSeq	NM_015050.2	ILMN_366253	FTSJD2	NM_015050.2	NM_015050.2		23070	194688144	NM_015050.2	FTSJD2	NP_055865.1	ILMN_3246953	0002940059	S	3963	GAGGTTGGAATCGACTTCACCATGGGGGTCCTTCAGCCAGCATCCAGCTC	6	+	37449123-37449172	6p21.2c	Homo sapiens FtsJ methyltransferase domain containing 2 (FTSJD2), mRNA.					
Homo sapiens	RefSeq	NM_016249.2	ILMN_14671	MAGEC2	NM_016249.2	NM_016249.2		51438	29337297	NM_016249.2	MAGEC2	NP_057333.1	ILMN_2088876	0004200722	S	1847	TAGTGGAACAAAATTGAAGGGTGGTCAGTAGTTTCATTTCCTTGTCCTGC	X	-	141290225-141290274	Xq27.2a	Homo sapiens melanoma antigen family C, 2 (MAGEC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12920247] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12920247] [evidence IDA]			HCA587; CT10; MAGEE1; MGC13377	CT10; HCA587; MAGEE1; MGC13377
Homo sapiens	RefSeq	NM_016249.2	ILMN_14671	MAGEC2	NM_016249.2	NM_016249.2		51438	29337297	NM_016249.2	MAGEC2	NP_057333.1	ILMN_1757152	0002750364	S	1516	GGTTCTAGGTAGTGGAGGGCCAGGTGGGGCTCGAGGAACGTAGTGTTCTT	X	-	141290556-141290605	Xq27.2a	Homo sapiens melanoma antigen family C, 2 (MAGEC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12920247] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12920247] [evidence IDA]			HCA587; CT10; MAGEE1; MGC13377	CT10; HCA587; MAGEE1; MGC13377
Homo sapiens	RefSeq	NM_207339.1	ILMN_10075	PAGE2	NM_207339.2	NM_207339.2		203569	141803561	NM_207339.2	PAGE2	NP_997222.1	ILMN_1724213	0001240195	S	229	GCAGTGCCTGCTTTTCAAGGGCCTGACATGGAAGCTTTTCAACAGGAACT	X	+	55117031-55117043:55117765-55117801	Xp11.21a	Homo sapiens P antigen family, member 2 (prostate associated) (PAGE2), mRNA.				GAGEC2; GAGEE2; PAGE-2; MGC62094	GAGEE2; MGC62094
Homo sapiens	RefSeq	NM_181719.2	ILMN_8422	TMCO4	NM_181719.3	NM_181719.3		255104	142378822	NM_181719.3	TMCO4	NP_859070.2	ILMN_1781276	0000430170	S	2615	GGCACCATCAACTGGCAGCAACAGAGCAGGCGCAGGTACAAAGAAGGCAG	1	-	19881602-19881651	1p36.13a	Homo sapiens transmembrane and coiled-coil domains 4 (TMCO4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP5-1056L3.6; DKFZp686C23231	RP5-1056L3.6; DKFZp686C23231
Homo sapiens	Unigene	Hs.545426	ILMN_108637	HS.545426	Hs.545426		Hs.545426		2669781	AA682500			ILMN_1838498	0004280025	S	130	TTCGCTCAGCAGCCAAGTTCCCCACAGATAGCAGGTGGACAGATCACGCC	8	+	55491322-55491371		zj18f01.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:450649 3, mRNA sequence					
Homo sapiens	RefSeq	NM_017551.1	ILMN_25946	GRID1	NM_017551.1	NM_017551.1		2894	55770851	NM_017551.1	GRID1	NP_060021.1	ILMN_1701993	0007100048	S	5113	CCATTGACATTTCTCCAATCAGAGCATGTGGACCTTGGAGCCAGGCATGC	10	-	87349978-87350027	10q23.1d-q23.2a	Homo sapiens glutamate receptor, ionotropic, delta 1 (GRID1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	KIAA1220	KIAA1220
Homo sapiens	RefSeq	NM_033014.1	ILMN_162221	OGN	NM_033014.2	NM_033014.2		4969	126273524	NM_033014.2	OGN	NP_148935.1	ILMN_1688838	0004010333	I	223	AACTTAAAATTATCAATCTTTCTTGAATTTCTGATAGAGAAGTAAAACTA	9	-	95165934-95165983	9q22.31a	Homo sapiens osteoglycin (OGN), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 10373482] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10373482] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	OG; SLRR3A; DKFZP586P2421; OIF	SLRR3A; DKFZP586P2421; OIF
Homo sapiens	RefSeq	NM_005216.3	ILMN_22943	DDOST	NM_005216.4	NM_005216.4		1650	112382210	NM_005216.4	DDOST	NP_005207.2	ILMN_1734231	0006450605	S	1626	CCTCTGTGGGAGATGCAACACTGAGAGCCAAGGGGTGGGAGTTGGGATAA	1	-	20978710-20978759	1p36.12b	Homo sapiens dolichyl-diphosphooligosaccharide-protein glycosyltransferase (DDOST), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 9642163] [evidence IDA]; A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [pmid 15835887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The glycosylation of a nitrogen atom of a free alpha amino terminal of a peptide [goid 6496] [pmid 9642163] [evidence IDA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [pmid 15835887] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [pmid 9642163] [evidence IDA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 9642163] [evidence IDA]	Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [pmid 9642163] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AGE-R1; OST; MGC2191; WBP1; KIAA0115; OST48; OK/SW-cl.45	OST; WBP1; KIAA0115; OST48
Homo sapiens	RefSeq	NM_013312.1	ILMN_3780	HOOK2	NM_013312.2	NM_013312.2		29911	154354984	NM_013312.2	HOOK2	NP_037444.2	ILMN_1682147	0001710520	S	2289	ACGCCTGGCATCTCTGAACCTTCGCCCCACTGACAAGCACTGACAGACCT	19	-	12874088-12874095:12874096-12874137	19p13.13c	Homo sapiens hook homolog 2 (Drosophila) (HOOK2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 9927460] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]	HK2	HK2
Homo sapiens	RefSeq	NM_001012334.1	ILMN_3786	MDK	NM_001012334.1	NM_001012334.1		4192	59894791	NM_001012334.1	MDK	NP_001012334.1	ILMN_1723087	0000150458	A	810	CCACCCCTAAGTGCCCAAAGTGGGGAGGGACAAGGGATTCTGGGAAGCTT	11	+	46361776-46361825	11p11.2c	Homo sapiens midkine (neurite growth-promoting factor 2) (MDK), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7835084] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9384573] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 1639750] [evidence NAS]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence ISS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 1639750] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 9384573] [evidence IDA]	FLJ27379; MK; NEGF2	FLJ27379; MK; NEGF2
Homo sapiens	RefSeq	NM_001012334.1	ILMN_3786	MDK	NM_001012334.1	NM_001012334.1		4192	59894791	NM_001012334.1	MDK	NP_001012334.1	ILMN_2349393	0004560717	A	645	AAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCACATG	11	+	46361611-46361620:46361621-46361660	11p11.2c	Homo sapiens midkine (neurite growth-promoting factor 2) (MDK), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7835084] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9384573] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 1639750] [evidence NAS]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence ISS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 1639750] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 9384573] [evidence IDA]	FLJ27379; MK; NEGF2	FLJ27379; MK; NEGF2
Homo sapiens	RefSeq	NM_001012334.1	ILMN_3786	MDK	NM_001012334.1	NM_001012334.1		4192	59894791	NM_001012334.1	MDK	NP_001012334.1	ILMN_2261876	0002850390	I	16	CACTGGGCGACCGCACCCGTGGCTTTCTCTGGGCGACCGGGTCCCAGACT	11	+	46359209-46359258	11p11.2c	Homo sapiens midkine (neurite growth-promoting factor 2) (MDK), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7835084] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9384573] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 1639750] [evidence NAS]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence ISS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 1639750] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 9384573] [evidence IDA]	FLJ27379; MK; NEGF2	FLJ27379; MK; NEGF2
Homo sapiens	RefSeq	XM_931910.1	ILMN_43790	LOC643910	XM_931910.1	XM_931910.1		643910	88942619	XM_931910.1	LOC643910	XP_937003.1	ILMN_1666820	0002070463	S	300	TAAGGTCCGGCGCCCGGCCCCTGCAGGGCTCCGTGTCCCATTTTCCCGGG	1	-	39320075-39320124		PREDICTED: Homo sapiens hypothetical protein LOC643910 (LOC643910), mRNA.					
Homo sapiens	RefSeq	NM_153204.1	ILMN_174754	C21ORF90	XR_017894.1	XR_017894.1		114043	113429137	XR_017894.1	C21orf90		ILMN_1666773	0006900017	S	636	GTCAAACATCCGGGGACCCTTAGCTGGAGAGGATGGCATGGGTGACACGC	21	+	44762584-44762633	21q22.3d	PREDICTED: Homo sapiens misc_RNA (C21orf90), miscRNA.					
Homo sapiens	RefSeq	NM_020387.1	ILMN_11468	RAB25	NM_020387.2	NM_020387.2		57111	116812566	NM_020387.2	RAB25	NP_065120.2	ILMN_1791826	0000050195	S	910	CCTTGTCCCCACTTCAGCCCCAGGACCTTTCCTTGCCCTTTGGTTCCAGA	1	+	154306744-154306793	1q22c	Homo sapiens RAB25, member RAS oncogene family (RAB25), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]	CATX-8	CATX-8
Homo sapiens	RefSeq	NM_001080845.1	ILMN_174777	PRED57	NM_001080845.1	NM_001080845.1		728039	124249383	NM_001080845.1	PRED57	NP_001074314.1	ILMN_2131269	0003840619	S	29	GAACCCTGAAACAGCGGGATGGAGAGACAGAAGCCTCGGGAAACGTGGAC				21q22.3e	Homo sapiens hCG401283 (PRED57), mRNA.					
Homo sapiens	RefSeq	XM_931685.1	ILMN_46344	LOC643612	XM_931685.1	XM_931685.1		643612	89041558	XM_931685.1	LOC643612	XP_936778.1	ILMN_1787103	0007400128	S	121	TTCCCTAGTGAGGGGGACGGCCAGAAACTGAAAGAGAAACTTGACGGCGG	17	-	37694626-37694675		PREDICTED: Homo sapiens hypothetical protein LOC643612 (LOC643612), mRNA.					
Homo sapiens	RefSeq	XM_001717607.1	ILMN_351851	LOC100130135	XM_001717607.1	XM_001717607.1		100130135	169165090	XM_001717607.1	LOC100130135	XP_001717659.1	ILMN_3272613	0002570072	M	539	AACCAAACACGGAAACTCACAGCAAGGCAGCAGCCGACTGGGCCGGGTGA	3	-	45610920-45610920:45610921-45610969	3p21.31j	PREDICTED: Homo sapiens hypothetical protein LOC100130135 (LOC100130135), mRNA.					
Homo sapiens	RefSeq	XM_940713.1	ILMN_31971	LOC651537	XM_940713.1	XM_940713.1		651537	89066706	XM_940713.1	LOC651537	XP_945806.1	ILMN_1755299	0003450497	S	2	TGTCTGAAAAGGGAATTAATCCAAATGGCTCCTTCCCTCGTGTAGCCAAG					PREDICTED: Homo sapiens similar to defensin, beta 106A (LOC651537), mRNA.					
Homo sapiens	RefSeq	XM_944135.1	ILMN_32143	LOC441378	XM_944135.1	XM_944135.1		441378	89028928	XM_944135.1	LOC441378	XP_949228.1	ILMN_1654452	0006270392	A	174	ATCAGTTTGGAAGGCACTGGCAGGATGGGAAGGCAGGCGGGGAGTGAGGT					PREDICTED: Homo sapiens hypothetical LOC441378 (LOC441378), mRNA.					
Homo sapiens	RefSeq	NR_029711.1	ILMN_387914	MIR194-1	NR_029711.1	NR_029711.1		406969	262205455	NR_029711.1	MIR194-1		ILMN_3309478	0003400053	S	19	CAGCAACTCCATGTGGACTGTGTACCAATTTCCAGTGGAGATGCTGTTAC				1q41d	Homo sapiens microRNA 194-1 (MIR194-1), microRNA.					
Homo sapiens	RefSeq	NM_005904.2	ILMN_10011	SMAD7	NM_005904.2	NM_005904.2		4092	52856403	NM_005904.2	SMAD7	NP_005895.1	ILMN_2203896	0003890709	S	2627	CTCATACACTCGTATGATACTTCGACACTGTTCTTAGCTCAATGAGCATG	18	-	46446633-46446682	18q21.1e	Homo sapiens SMAD family member 7 (SMAD7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9436979] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9256479] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 10823886] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9256479] [evidence TAS]; A TGF-beta cytoplasmic mediator that inhibits the signaling function of common-partner and pathway-specific mediators [goid 30617] [pmid 9215638] [evidence TAS]	FLJ16482; MADH8; MADH7	FLJ16482; MADH8; MADH7
Homo sapiens	RefSeq	NM_005904.2	ILMN_10011	SMAD7	NM_005904.2	NM_005904.2		4092	52856403	NM_005904.2	SMAD7	NP_005895.1	ILMN_2203891	0004220767	S	2466	CCCATCCTGTGTGTTAAGCTCTGCTATTAGGCCAGCAAGCGGGGATGTCC	18	-	46446794-46446843	18q21.1e	Homo sapiens SMAD family member 7 (SMAD7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9436979] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9256479] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 10823886] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9256479] [evidence TAS]; A TGF-beta cytoplasmic mediator that inhibits the signaling function of common-partner and pathway-specific mediators [goid 30617] [pmid 9215638] [evidence TAS]	FLJ16482; MADH8; MADH7	FLJ16482; MADH8; MADH7
Homo sapiens	RefSeq	XM_938853.1	ILMN_35120	LOC285484	XM_938853.2	XM_938853.2		285484	113415978	XM_938853.2	LOC285484	XP_943946.2	ILMN_1710591	0001050685	A	2299	CACACATACATAAACCCACATCAATGGTAATGGTGGTAATCTCTGGCCGG				4p16.1f	PREDICTED: Homo sapiens hypothetical protein LOC285484 (LOC285484), mRNA.					
Homo sapiens	RefSeq	XM_939909.1	ILMN_138679	KIAA1160	XM_939909.1	XM_939909.1		57461	88971052	XM_939909.1	KIAA1160	XP_945002.1	ILMN_1664102	0006550504	I	3021	CCACGCCTTCAGTGCACAAAGCACTCCCCTCCTGGGATCTCTTCAGGGAT				3q21.3c	PREDICTED: Homo sapiens KIAA1160 protein (KIAA1160), mRNA.					
Homo sapiens	RefSeq	XM_929370.1	ILMN_3554	NF2	NM_000268.2	NM_000268.2		4771	32967273	NM_000268.2	NF2	NP_000259.1	ILMN_1676721	0007200259	S	3763	TTTTCTCCATGGCTGATGCTGCTGTGGCCAGCCAGGGCCCTTGAGATCCT	22	+	28422343-28422392	22q12.2a	Homo sapiens neurofibromin 2 (bilateral acoustic neuroma) (NF2), transcript variant 1, mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10401006] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9537418] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9537418] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 10861283] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 8379998] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10401006] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IEA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 17210637] [evidence IDA]	The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [pmid 17210637] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 17210637] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 17210637] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 12444102] [evidence IDA]; The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system [goid 14010] [pmid 17353411] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to another cell [goid 22408] [pmid 17210637] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 9537418] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [pmid 17210637] [evidence TAS]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42518] [pmid 12444102] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42524] [pmid 12444102] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells [goid 45216] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the JAK-STAT signaling pathway activity [goid 46426] [pmid 12444102] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51496] [pmid 9537418] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	SCH; ACN; Merlin; BANF	
Homo sapiens	RefSeq	NM_181831.1	ILMN_3554	NF2	NM_000268.2	NM_000268.2		4771	32967273	NM_000268.2	NF2	NP_000259.1	ILMN_1671267	0001090605	A	812	AGATCTACTGCCCTCCTGAGGCTTCTGTGCTCCTGGCTTCTTACGCCGTC	22	+	28368216-28368265	22q12.2a	Homo sapiens neurofibromin 2 (bilateral acoustic neuroma) (NF2), transcript variant 1, mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10401006] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9537418] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9537418] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 10861283] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 8379998] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10401006] [evidence IDA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence IEA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 17210637] [evidence IDA]	The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [pmid 17210637] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 17210637] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 17210637] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 12444102] [evidence IDA]; The multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system [goid 14010] [pmid 17353411] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to another cell [goid 22408] [pmid 17210637] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 9537418] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [pmid 17210637] [evidence TAS]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42518] [pmid 12444102] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42524] [pmid 12444102] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells [goid 45216] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the JAK-STAT signaling pathway activity [goid 46426] [pmid 12444102] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51496] [pmid 9537418] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	SCH; ACN; Merlin; BANF	SCH; ACN; Merlin; BANF
Homo sapiens	RefSeq	XM_941089.1	ILMN_30878	LOC651834	XM_941089.1	XM_941089.1		651834	89062206	XM_941089.1	LOC651834	XP_946182.1	ILMN_1787933	0000870097	S	2713	CGGCCGTCTCCTACTAAGGGCACTTCTACTGGATCAGGTGCTTCTCATCT					PREDICTED: Homo sapiens similar to Proprotein convertase subtilisin/kexin type 7 precursor (Proprotein convertase PC7) (Subtilisin/kexin-like protease PC7) (Prohormone convertase PC7) (PC8) (hPC8) (Lymphoma proprotein convertase) (LOC651834), mRNA.					
Homo sapiens	RefSeq	XR_015234.1	ILMN_183493	LOC440015	XR_015234.1	XR_015234.1		440015	113414554	XR_015234.1	LOC440015		ILMN_3232605	0001450170	I	1183	GGTGGAAGAGCCTGCTCCGCTGGAACCACTCCTCAGCCAGGAAGAACACG	3	+	75801954-75802003	3p12.3d	PREDICTED: Homo sapiens misc_RNA (LOC440015), miscRNA.					
Homo sapiens	RefSeq	XM_940023.1	ILMN_10127	PCSK6	NM_138320.1	NM_138320.1		5046	20336181	NM_138320.1	PCSK6	NP_612193.1	ILMN_1676595	0001070259	A	1603	TCGCCTTGGCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGACGTCCAG	15	-	101924600-101924630:101929669-101929687	15q26.3d	Homo sapiens proprotein convertase subtilisin/kexin type 6 (PCSK6), transcript variant 7, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8906861] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8218226] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 8615794] [evidence EXP]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12535616] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [pmid 12535616] [evidence IDA]	The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade [goid 7354] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9100] [pmid 8218226] [evidence IDA]; Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway [goid 30510] [pmid 10467177] [evidence TAS]; The generation of a mature nerve growth factor by proteolysis of a precursor [goid 32455] [pmid 12787574] [evidence EXP]; The appearance of nerve growth factor due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels [goid 32902] [pmid 8615794] [evidence IDA]; The regulated release of a substance by a cell [goid 32940] [pmid 8615794] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [pmid 9242664] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [pmid 9738469] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [pmid 8218226] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 12535616] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [pmid 12535616] [evidence IDA]; Interacting selectively with nerve growth factor [goid 48406] [pmid 8615794] [evidence IDA]	PACE4; SPC4	
Homo sapiens	RefSeq	NM_138325.2	ILMN_10127	PCSK6	NM_138320.1	NM_138320.1		5046	20336181	NM_138320.1	PCSK6	NP_612193.1	ILMN_1710070	0003180703	A	1611	GCTCTAGAAGCAAACAGCCAGTTAACCTGGAGGGACGTCCAGCACCTGCT	15	-	101924592-101924630:101929669-101929679	15q26.3d	Homo sapiens proprotein convertase subtilisin/kexin type 6 (PCSK6), transcript variant 7, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8906861] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8218226] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 8615794] [evidence EXP]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12535616] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [pmid 12535616] [evidence IDA]	The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade [goid 7354] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The chemical reactions and pathways involving glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9100] [pmid 8218226] [evidence IDA]; Any process that modulates the frequency, rate or extent of the activity of any BMP receptor signaling pathway [goid 30510] [pmid 10467177] [evidence TAS]; The generation of a mature nerve growth factor by proteolysis of a precursor [goid 32455] [pmid 12787574] [evidence EXP]; The appearance of nerve growth factor due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels [goid 32902] [pmid 8615794] [evidence IDA]; The regulated release of a substance by a cell [goid 32940] [pmid 8615794] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [pmid 9242664] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [pmid 9738469] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [pmid 8218226] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 12535616] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [pmid 12535616] [evidence IDA]; Interacting selectively with nerve growth factor [goid 48406] [pmid 8615794] [evidence IDA]	PACE4; SPC4	PACE4; SPC4
Homo sapiens	RefSeq	NM_130900.2	ILMN_162405	RAET1L	NM_130900.2	NM_130900.2		154064	126723294	NM_130900.2	RAET1L	NP_570970.2	ILMN_2206126	0000730021	S	459	GACACAGCAGTGGATCTTGGCAGTTCAGTATCGATGGACAGACCTTCCTA	6	-	150383917-150383966	6q25.1b	Homo sapiens retinoic acid early transcript 1L (RAET1L), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]			
Homo sapiens	RefSeq	NM_020642.3	ILMN_9655	C11ORF17	NM_020642.3	NM_020642.3		56672	116174749	NM_020642.3	C11orf17	NP_065693.2	ILMN_2267365	0001430358	I	20	TCCCTCTTCCTAGAATAGCGTTGCGCGCATGCGCCTTGACGAGTGAGCCG	11	+	8889296-8889345	11p15.4a	Homo sapiens chromosome 11 open reading frame 17 (C11orf17), transcript variant 2, mRNA.				BCA3; AKIP1	BCA3; AKIP1
Homo sapiens	RefSeq	NM_020642.3	ILMN_9655	C11ORF17	NM_020642.3	NM_020642.3		56672	116174749	NM_020642.3	C11orf17	NP_065693.2	ILMN_2359029	0003180288	A	1155	CGCGCCCGGCCTCAGTGCCTTTTTTAACTTGAGGGTGTAGAGGTCCTCCA	11	+	8898049-8898098	11p15.4a	Homo sapiens chromosome 11 open reading frame 17 (C11orf17), transcript variant 2, mRNA.				BCA3; AKIP1	BCA3; AKIP1
Homo sapiens	RefSeq	NM_001029863.1	ILMN_6936	C6ORF120	NM_001029863.1	NM_001029863.1		387263	71143155	NM_001029863.1	C6orf120	NP_001025034.1	ILMN_1743187	0005560703	S	3695	AACTTGACAGGAGTCTGCCTACAATGTAAGACTGCCTACTGAAGAAAGCA	6	+	169847876-169847925	6q27f	Homo sapiens chromosome 6 open reading frame 120 (C6orf120), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			bA160E12.4	bA160E12.4
Homo sapiens	RefSeq	NM_018372.3	ILMN_11973	C1ORF103	NM_018372.3	NM_018372.3		55791	55743123	NM_018372.3	C1orf103	NP_060842.3	ILMN_1756811	0004610154	I	1551	CCCAGCTTGCTTCCATGGCCAATCTAAGGGCAGAGAAGAATAAAGTGGAG	1	-	111494161-111494210	1p13.3a	Homo sapiens chromosome 1 open reading frame 103 (C1orf103), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]	RIF1; FLJ11269; RP11-96K19.1	RIF1; FLJ11269; RP11-96K19.1
Homo sapiens	RefSeq	NM_207485.1	ILMN_6107	FLJ41327	NM_207485.1	NM_207485.1		401045	46409595	NM_207485.1	FLJ41327	NP_997368.1	ILMN_1813427	0001660403	S	1564	ATCCCGTCAACATCACAGTCCCGACCTTCCCACACGGACAAGCTCACGGG	2	+	242619043-242619092	2q37.3g	Homo sapiens FLJ41327 protein (FLJ41327), mRNA.					
Homo sapiens	RefSeq	NM_001038702.1	ILMN_28719	CDC42SE2	NM_001038702.1	NM_001038702.1		56990	84697025	NM_001038702.1	CDC42SE2	NP_001033791.1	ILMN_2313926	0006770161	A	3114	AGGCATGAAGTGGTGCCAGTAAGCGTAGAGCGGAAATGTTGACTTTAGTT	5	+	130729512-130729561	5q31.1a	Homo sapiens CDC42 small effector 2 (CDC42SE2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10816584] [evidence IDA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 10816584] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 10816584] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10816584] [evidence IPI]	SPEC2; FLJ21967	SPEC2; FLJ21967
Homo sapiens	RefSeq	NM_138443.2	ILMN_18943	CCDC5	NM_138443.2	NM_138443.2		115106	34147542	NM_138443.2	CCDC5	NP_612452.1	ILMN_1745946	0002230681	I	29	TAGTAAAGTGGCGGGAGCCGCAGCTATGGAGCCGCAGGAGGAGAGAGAAA	18	+	41938351-41938375:41938376-41938400	18q21.1a	Homo sapiens coiled-coil domain containing 5 (spindle associated) (CCDC5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		FLJ40084; HEI-C; FLJ21094; HsT1461	FLJ40084; HEI-C; FLJ21094; HsT1461
Homo sapiens	RefSeq	XM_941228.1	ILMN_138697	SLC26A11	XM_941228.1	XM_941228.1		284129	89043096	XM_941228.1	SLC26A11	XP_946321.1	ILMN_1667877	0004180390	I	62	TTTCCCTGTGGCCGTCATGGCTGCTGTCCCGCGTCTTAGTGGCCATCATG				17q25.3d-q25.3e	PREDICTED: Homo sapiens solute carrier family 26, member 11 (SLC26A11), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12626430] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12626430] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12626430] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12626430] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [pmid 12626430] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [pmid 12626430] [evidence IDA];  [goid 15380] [evidence IEA]		
Homo sapiens	RefSeq	NM_005600.1	ILMN_11222	NIT1	NM_005600.1	NM_005600.1		4817	5031946	NM_005600.1	NIT1	NP_005591.1	ILMN_1698330	0001740280	S	1065	TGACTTCTGTGAGTTTAGACCTGCCCCTCCCACCCCCACCCTGCCACTAT	1	+	159357184-159357233	1q23.3a	Homo sapiens nitrilase 1 (NIT1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the reaction: a nitrile + H2O = a carboxylate + NH3. Acts on a wide range of aromatic nitriles including (indole-3-yl)-acetonitrile and some aliphatic nitriles, and on the corresponding acid amides [goid 257] [pmid 9671749] [evidence TAS]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]	MGC57670	MGC57670
Homo sapiens	RefSeq	NM_005681.2	ILMN_165149	TAF1A	NM_005681.2	NM_005681.2		9015	21536363	NM_005681.2	TAF1A	NP_005672.1	ILMN_2360448	0004850605	A	1458	GCAAGATCACCAAATCTTAGGGAAGAAAATTAAGCGGATGAAGAGATCTG	1	-	222732036-222732085	1q41e	Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa (TAF1A), transcript variant 1, mRNA.	A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11250901] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase I (Pol I), originating at a Pol I-specific promoter [goid 6360] [pmid 7801123] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7801123] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase I transcription [goid 3701] [pmid 7801123] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 7801123] [evidence TAS]	TAFI48; SL1; RAFI48; MGC:17061	TAFI48; SL1; RAFI48; MGC:17061
Homo sapiens	RefSeq	NM_005681.2	ILMN_165149	TAF1A	NM_005681.2	NM_005681.2		9015	21536363	NM_005681.2	TAF1A	NP_005672.1	ILMN_1655844	0003060059	I	376	GAAGCTCTGCTGAAGCACCAATGGCAGCAAGCTGCAGAATACATGTACAG	1	-	222757524-222757573	1q41e	Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa (TAF1A), transcript variant 1, mRNA.	A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11250901] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase I (Pol I), originating at a Pol I-specific promoter [goid 6360] [pmid 7801123] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7801123] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase I transcription [goid 3701] [pmid 7801123] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 7801123] [evidence TAS]	TAFI48; SL1; RAFI48; MGC:17061	TAFI48; SL1; RAFI48; MGC:17061
Homo sapiens	RefSeq	XM_936277.1	ILMN_27181	ASAH2	NM_019893.1	NM_019893.1		56624	9845266	NM_019893.1	ASAH2	NP_063946.1	ILMN_1776129	0004830544	A	328	AATGCACAGGGCATCCTCACCAGGCTATACAGTCGTGCCTTCATCATGGC	10	-	51673043-51673092	10q11.23b	Homo sapiens N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10781606] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [pmid 10781606] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10781606] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IEA]	MGC129777; HNAC1	
Homo sapiens	RefSeq	NM_019893.1	ILMN_27181	ASAH2	NM_019893.1	NM_019893.1		56624	9845266	NM_019893.1	ASAH2	NP_063946.1	ILMN_1780786	0001190112	A	327	GAATGCACAGGGCATCCTCACCAGGCTATACAGTCGTGCCTTCATCATGG	10	-	51673044-51673093	10q11.23b	Homo sapiens N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 (ASAH2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10781606] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [pmid 10781606] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10781606] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylsphingosine + H2O = a fatty acid + sphingosine [goid 17040] [evidence IEA]	MGC129777; HNAC1	MGC129777; HNAC1
Homo sapiens	RefSeq	NM_001004345.1	ILMN_3502	FLJ16124	NM_001004345.1	NM_001004345.1		440867	51972261	NM_001004345.1	FLJ16124	NP_001004345.1	ILMN_2114894	0003610239	S	1690	CGCCCAGGGTGAGAGCTGAATGTAGGCTCCAACAGGAAGACGGCATTGAA	2	+	66162036-66162040:66165148-66165192	2p14c	Homo sapiens FLJ16124 protein (FLJ16124), mRNA.					
Homo sapiens	RefSeq	XR_036895.1	ILMN_344133	LOC729327	XR_036895.1	XR_036895.1		729327	169214773	XR_036895.1	LOC729327		ILMN_3225684	0002690021	A	889	GGGCATCAAATGTGCAGCACAGAACACCAGGCAGCAGCCCTCAGGGCTCC				20p11.21a	PREDICTED: Homo sapiens misc_RNA (LOC729327), miscRNA.					
Homo sapiens	RefSeq	NM_032532.1	ILMN_17340	FNDC1	NM_032532.1	NM_032532.1		84624	66793377	NM_032532.1	FNDC1	NP_115921.1	ILMN_2163873	0006900097	S	6203	TCCAGGAATAGCATATGCACGCTGTTCTTGCTTCATGGAATGCTACATGC	6	+	159612782-159612831	6q25.3e	Homo sapiens fibronectin type III domain containing 1 (FNDC1), mRNA.				bA243O10.1; AGS8; RP11-243O10.2; KIAA1866; MEL4B3	bA243O10.1; AGS8; RP11-243O10.2; KIAA1866; MEL4B3
Homo sapiens	Unigene	Hs.560736	ILMN_114427	HS.560736	Hs.560736		Hs.560736		11593236	BF509938			ILMN_1863919	0003520605	S	267	GCTAGTGCCACACAGTGCCCCAAAGACCACACAGGTCCTTCAGTGGATGC	2	+	232294451-232294500		UI-H-BI4-aph-d-11-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3087405 3, mRNA sequence					
Homo sapiens	Unigene	Hs.573255	ILMN_125436	HS.573255	Hs.573255		Hs.573255		18988180	BM678284			ILMN_1883473	0001500369	S	224	GCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACG	6	+	37706640-37706689		UI-E-EJ0-aif-j-07-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-aif-j-07-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001128589.1	ILMN_366369	FCGR1C	NM_001128589.1	NM_001128589.1		100132417	190570169	NM_001128589.1	FCGR1C	NP_001122061.1	ILMN_3247506	0005570398	S	654	CCACTCCTGGGGGGAATCTGGTCACCCTGAGCTGTGAAACAAAGTTGCTC				1q21.1e	Homo sapiens Fc fragment of IgG, high affinity Ic, receptor (CD64) (FCGR1C), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]		
Homo sapiens	RefSeq	NM_017776.1	ILMN_12956	ZNF673	NM_017776.1	NM_017776.1		55634	8923321	NM_017776.1	ZNF673	NP_060246.1	ILMN_1710768	0000870373	S	2091	TCCGCTAGGGATCTTGGAACATATCCCCCATGGATAAGGGAGGGGTACTG	X	+	46218817-46218866	Xp11.3a	Homo sapiens zinc finger protein 673 (ZNF673), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ20344; RP4-733D15.4	RP4-733D15.4; FLJ20344
Homo sapiens	RefSeq	NR_003080.1	ILMN_170927	SNORD112	NR_003080.1	NR_003080.1		692215	96974978	NR_003080.1	SNORD112		ILMN_3238950	0005260528	S	25	ATGAACAAAAGATCATGATTAATCCAGTTCTGCACAAAACACTGAGGTCC	14	+	100434034-100434083	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 112 (SNORD112), small nucleolar RNA.				14q(0)	14q(0)
Homo sapiens	RefSeq	NM_002062.2	ILMN_183777	GLP1R	NM_002062.2	NM_002062.2		2740	19923203	NM_002062.2	GLP1R	NP_002053.2	ILMN_1787257	0006020450	S	2644	TTGCCCTGCCTGCAGCCTCCCCCACAAATAATGAACAGCAGAAAGACTGG	6	+	39163079-39163128	6p21.2b	Homo sapiens glucagon-like peptide 1 receptor (GLP1R), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8405712] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8405712] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 8405712] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 7589461] [evidence IDA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]; A series of molecular signals in which a cell uses cyclic AMP to convert an extracellular signal into a response [goid 19933] [pmid 7589461] [evidence IDA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with glucagon to initiate a change in cell activity [goid 4967] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA]	MGC138331	
Homo sapiens	RefSeq	XM_001719718.1	ILMN_343293	LOC100131001	XM_001719718.1	XM_001719718.1		100131001	169211717	XM_001719718.1	LOC100131001	XP_001719770.1	ILMN_3285446	0002640148	M	2578	CTAGGAAGGCAGGGCCTCGCTGCATCCCAGAATGATCCCATGGGCCCCAA				17p11.2a	PREDICTED: Homo sapiens hypothetical protein LOC100131001 (LOC100131001), mRNA.					
Homo sapiens	RefSeq	NM_017933.3	ILMN_7859	PID1	NM_017933.3	NM_017933.3		55022	40255259	NM_017933.3	PID1	NP_060403.3	ILMN_1671891	0001410114	S	2083	CCGAGGAAACCTTGCCCCCATCACTCAGCATTGCACTTAGATACAGAATG	2	-	229597546-229597595	2q36.3d-q36.3e	Homo sapiens phosphotyrosine interaction domain containing 1 (PID1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			HMFN2073; FLJ20701; NYGGF4	HMFN2073; FLJ20701; NYGGF4
Homo sapiens	RefSeq	XM_001722037.1	ILMN_345967	LOC100128403	XM_001722037.1	XM_001722037.1		100128403	169209318	XM_001722037.1	LOC100128403	XP_001722089.1	ILMN_3189113	0000450066	A	8424	GACACGGCCACAAGCTGTGAGTCATGAAAAGGAGGGTGCAGGTGATAGGC				15q26.1c	PREDICTED: Homo sapiens hypothetical protein LOC100128403 (LOC100128403), mRNA.					
Homo sapiens	RefSeq	NM_052903.2	ILMN_25939	TUBGCP5	NM_052903.3	NM_052903.3		114791	142345154	NM_052903.3	TUBGCP5	NP_443135.2	ILMN_1803045	0000430315	S	3487	GTGAGACCCTGACTCAGAAAGAACCACTTGCCCACAGTCCAGACAGATGG				15q11.2c	Homo sapiens tubulin, gamma complex associated protein 5 (TUBGCP5), mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A multiprotein complex composed of gamma-tubulin other non-tubulin proteins that forms a flexible open ring structure thought to be the unit of nucleation at the minus end of a microtubule [goid 8274] [pmid 11694571] [evidence IDA]	The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [pmid 11694571] [evidence IDA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 11694571] [evidence IDA]	GCP5; KIAA1899	KIAA1899; GCP5
Homo sapiens	RefSeq	NM_001080473.1	ILMN_174607	MFSD2B	NM_001080473.1	NM_001080473.1		388931	122937338	NM_001080473.1	MFSD2B	NP_001073942.1	ILMN_2238383	0002650131	I	1253	CTTCTACTCCTCCTACGTCTTCTTCACCAAGCTGTCTGGCGCATGTGCCC	2	+	24100026-24100075	2p23.3d	Homo sapiens major facilitator superfamily domain containing 2B (MFSD2B), mRNA.					
Homo sapiens	RefSeq	NM_033410.2	ILMN_7946	ZNF764	NM_033410.2	NM_033410.2		92595	34147458	NM_033410.2	ZNF764	NP_219363.1	ILMN_1727938	0005550470	S	2388	ACAGTTGTTGGGAGCTGAGCCGGAGCCAGAACTCACAATTCACCGTGGCC	16	-	30565385-30565434	16p11.2c	Homo sapiens zinc finger protein 764 (ZNF764), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC13138	MGC13138
Homo sapiens	RefSeq	NR_003054.1	ILMN_178735	SNORD65	NR_003054.1	NR_003054.1		692106	94967017	NR_003054.1	SNORD65		ILMN_3246353	0001440072	S	10	AATCACCCAAAATAGCTGGAATTACCGGCAGATTGTGTAGTGGTGAACCT	17	+	16285274-16285323	17p11.2i	Homo sapiens small nucleolar RNA, C/D box 65 (SNORD65), small nucleolar RNA.				HBII-135	HBII-135
Homo sapiens	RefSeq	NM_152604.1	ILMN_29887	ZNF383	NM_152604.1	NM_152604.1		163087	23097320	NM_152604.1	ZNF383	NP_689817.1	ILMN_1799488	0000840673	S	1377	GGCTTTTACTCAGAGCTCACAGCTTCGTCAACATCAGAGAATTCACGCTG	19	+	37734257-37734306	19q13.12c	Homo sapiens zinc finger protein 383 (ZNF383), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSD17; FLJ35863	HSD17; FLJ35863
Homo sapiens	RefSeq	NM_194320.1	ILMN_20641	ZNF169	NM_194320.2	NM_194320.2		169841	110815806	NM_194320.2	ZNF169	NP_919301.2	ILMN_1696583	0000630626	S	1730	GCATTTGCGATGAATGTGGGCGCGGCTTTGGCTTTAAGTCTGCCCTCATC	9	+	96103286-96103335	9q22.32a	Homo sapiens zinc finger protein 169 (ZNF169), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC51961	MGC51961
Homo sapiens	RefSeq	XM_001726993.1	ILMN_342387	LOC727838	XM_001726993.1	XM_001726993.1		727838	169216395	XM_001726993.1	LOC727838	XP_001727045.1	ILMN_3284517	0002510465	M	450	AGTGGCTCAGAAGAGCCCCGGCTGTTGCTGGTGCATGAGAGGCTGGGCGT				Xq24b	PREDICTED: Homo sapiens hypothetical LOC727838 (LOC727838), mRNA.					
Homo sapiens	RefSeq	XM_001726993.1	ILMN_342387	LOC727838	XM_001726993.1	XM_001726993.1		727838	169216395	XM_001726993.1	LOC727838	XP_001727045.1	ILMN_3208006	0001770373	A	287	ACAACTTCGACTTGGTCGCGGCCGCCCGTCGCTACCCCATAAGAGGCTTT				Xq24b	PREDICTED: Homo sapiens hypothetical LOC727838 (LOC727838), mRNA.					
Homo sapiens	RefSeq	NM_004227.3	ILMN_29534	CYTH3	NM_004227.3	NM_004227.3		9265	33946275	NM_004227.3	CYTH3	NP_004218.1	ILMN_1713918	0006960131	S	3875	AGATACTTTTTTCCAGAGACAGAGGCCAGGAGGCAGTGAGGGGAGCCCCG	7	-	6202092-6202141	7p22.1b	Homo sapiens cytohesin 3 (CYTH3), mRNA.				GRP1; ARNO3	GRP1; ARNO3
Homo sapiens	RefSeq	NM_004227.3	ILMN_29534	CYTH3	NM_004227.3	NM_004227.3		9265	33946275	NM_004227.3	CYTH3	NP_004218.1	ILMN_2160727	0002750603	S	3968	GCTGGCCGCCCTGGTTCATATTTGAGTTTAATTGTACTGACCCTGGACCC	7	-	6201999-6202048	7p22.1b	Homo sapiens cytohesin 3 (CYTH3), mRNA.				GRP1; ARNO3	GRP1; ARNO3
Homo sapiens	RefSeq	XM_927921.1	ILMN_44055	LOC653533	XM_927921.1	XM_927921.1		653533	88953453	XM_927921.1	LOC653533	XP_933014.1	ILMN_1786597	0002070519	S	365	CTGTTCAGCAGGACCCTCTAATGGCCTCTAAGTTTTCAAATGAAGGGAAG	2	-	106458014-106458053:106458544-106458553		PREDICTED: Homo sapiens similar to anaphase promoting complex subunit 1 (LOC653533), mRNA.					
Homo sapiens	RefSeq	NM_144992.3	ILMN_30337	MGC26733	NM_144992.3	NM_144992.3		200403	50355981	NM_144992.3	MGC26733	NP_659429.3	ILMN_1714172	0003370279	S	4214	GAAGGGTGGAAATAATAAAGCTCTTCAGAGAGGTGAGCATGGGGCTATGC	2	+	98274368-98274417	2q11.2b-q11.2c	Homo sapiens hypothetical protein MGC26733 (MGC26733), mRNA.					
Homo sapiens	RefSeq	NM_052887.2	ILMN_14311	TIRAP	NM_052887.2	NM_052887.2		114609	22547217	NM_052887.2	TIRAP	NP_443119.1	ILMN_1776703	0005550746	I	1791	ACATATTGTCATACGTGGGGGGCTGTTACTGGGTTCTCCAGTCTCCTCCC	11	+	125672297-125672346	11q24.2c	Homo sapiens toll-interleukin 1 receptor (TIR) domain containing adaptor protein (TIRAP), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14625308] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12447442] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16024789] [evidence EXP]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12721283] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11544529] [evidence IPI]	FLJ42305; wyatt; Mal	FLJ42305; wyatt; Mal
Homo sapiens	RefSeq	XM_939605.1	ILMN_40297	LOC645645	XM_939605.2	XM_939605.2		645645	113412686	XM_939605.2	LOC645645	XP_944698.2	ILMN_1699411	0004480064	S	78	CCTTGTTGTGTCCAGGAGATAAAATAAGCGGGTGGGTGACCCTCTGGGGG				1q42.3c	PREDICTED: Homo sapiens hypothetical protein LOC645645 (LOC645645), mRNA.					
Homo sapiens	RefSeq	NM_000680.1	ILMN_18033	ADRA1A	NM_033302.2	NM_033302.2		148	111118987	NM_033302.2	ADRA1A	NP_150645.2	ILMN_1813598	0000780670	A	1626	GGAAATTTTTCTCTTCCATGCCCCGTGGATCTGCCAGGATTACAGTGTCC	8	-	26722566-26722615	8p21.2a	Homo sapiens adrenergic, alpha-1A-, receptor (ADRA1A), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8396931] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction as a result of the baroreceptor response to increased blood pressure [goid 1985] [evidence IEA]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IEA]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IEA]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10671514] [evidence TAS]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 8183249] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8396931] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10860850] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10671514] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8396931] [evidence TAS]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10860850] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA];  [goid 4937] [pmid 9490024] [evidence NAS];  [goid 4937] [pmid 7737411] [evidence TAS]	ADRA1C; ALPHA1AAR; ADRA1L1	ADRA1C; ALPHA1AAR; ADRA1L1
Homo sapiens	RefSeq	NM_001032296.1	ILMN_30357	STK24	NM_003576.3	NM_003576.3		8428	110349736	NM_003576.3	STK24	NP_003567.2	ILMN_1655163	0006180050	A	2414	GCGCTCTCGTCTGACATTTGTTTGGAATCGTGCCACTGCTGGTCTGCGCC	13	-	99104530-99104579	13q32.2b	Homo sapiens serine/threonine kinase 24 (STE20 homolog, yeast) (STK24), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9353338] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MST3B; MST3; MST-3; STK3; STE20	MST3B; MST3; MST-3; STK3
Homo sapiens	RefSeq	NM_003576.2	ILMN_30357	STK24	NM_003576.3	NM_003576.3		8428	110349736	NM_003576.3	STK24	NP_003567.2	ILMN_1702723	0003170717	I	261	GACTGGCCTTGAATAAAAGGAGGGCCACTCTACCTCATCCTGGAGGGAGC	13	-	99174031-99174080	13q32.2b	Homo sapiens serine/threonine kinase 24 (STE20 homolog, yeast) (STK24), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9353338] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MST3B; MST3; MST-3; STK3; STE20	MST3B; MST3; MST-3; STK3
Homo sapiens	RefSeq	XM_939861.1	ILMN_31022	MSGN1	XM_939861.1	XM_939861.1		343930	88954910	XM_939861.1	MSGN1	XP_944954.1	ILMN_1809435	0005490605	A	334	AAGGCCCAGAAGGGCACCAAAGTCAGGATGTCTGTCCAGCGGAGGCGGAA				2p24.2b	PREDICTED: Homo sapiens mesogenin 1 (MSGN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	XM_371302.3	ILMN_168732	LOC730262	XM_001134402.1	XM_001134402.1		730262	113411387	XM_001134402.1	LOC730262	XP_001134402.1	ILMN_1745276	0001570022	S	385	GGTTATCTTTGCAGACGCCACCATCGCTGTGAGCCCTGTACTATCAGCCA	1	+	146910661-146910709:146910710-146910710	1q21.1e	PREDICTED: Homo sapiens similar to peptidylprolyl isomerase A (cyclophilin A)-like 4 (LOC730262), mRNA.					
Homo sapiens	RefSeq	XM_371304.3	ILMN_168732	LOC730262	XM_001134402.1	XM_001134402.1		730262	113411387	XM_001134402.1	LOC730262	XP_001134402.1	ILMN_1665285	0000380377	S	374	AAAAGATCAGTGGTTATCTTTGCAGACGCCACCATCGCTGTGAGCCCTGT	1	+	146910650-146910699	1q21.1e	PREDICTED: Homo sapiens similar to peptidylprolyl isomerase A (cyclophilin A)-like 4 (LOC730262), mRNA.					
Homo sapiens	RefSeq	XM_001125734.1	ILMN_176414	LOC727781	XM_001125734.1	XM_001125734.1		727781	113429159	XM_001125734.1	LOC727781	XP_001125734.1	ILMN_3248389	0004540671	S	2638	AGACCAGCACTAAGCCCCAGCTGACCAGGTCTCCACTGATCAAGCCCCAC	21	+	116592-116641		PREDICTED: Homo sapiens hypothetical LOC727781 (LOC727781), mRNA.					
Homo sapiens	RefSeq	XM_001716631.1	ILMN_341003	LOC100134498	XM_001716631.1	XM_001716631.1		100134498	169170586	XM_001716631.1	LOC100134498	XP_001716683.1	ILMN_3240485	0002260717	S	1	ATGGTTGACCGTTATAGCCCCAATGGGGGGTGCTACCCCGTCCGGGGCCT	7	+	99847864-99847913		PREDICTED: Homo sapiens hypothetical protein LOC100134498 (LOC100134498), mRNA.					
Homo sapiens	RefSeq	XM_001718800.1	ILMN_342434	LOC100128088	XM_001718800.1	XM_001718800.1		100128088	169202083	XM_001718800.1	LOC100128088	XP_001718852.1	ILMN_3261576	0005670564	M	361	CACTGGGTCGTTCAGGAGGATCAACTGCTGAGTGGCTACCCCAGGGACGT	11	-	102128096-102128145	11q22.2b	PREDICTED: Homo sapiens similar to hCG2042634 (LOC100128088), mRNA.					
Homo sapiens	RefSeq	NM_004182.2	ILMN_2795	UXT	NM_004182.2	NM_004182.2		8409	24041015	NM_004182.2	UXT	NP_004173.1	ILMN_1671314	0000150131	A	318	CGCATCTATGTGGCCCTGGGATATGGTTTTTTCCTGGAGTTGACACTGGC	X	-	47516626-47516675	Xp11.23f	Homo sapiens ubiquitously-expressed transcript (UXT), transcript variant 2, mRNA.	A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [pmid 16221885] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12762840] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 16221885] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 12762840] [evidence IDA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [pmid 16221885] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [pmid 12762840] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51297] [pmid 16221885] [evidence IMP]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12762840] [evidence TAS]; Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [pmid 12762840] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 12762840] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	ART-27	ART-27
Homo sapiens	RefSeq	XR_039187.1	ILMN_346492	LOC642513	XR_039187.1	XR_039187.1		642513	169173236	XR_039187.1	LOC642513		ILMN_3212461	0002690504	A	906	CTGTAACTTCAGAGGAGCAACTCTGGCAGGCACTGATTTAGAGAACTGTG				8p12e	PREDICTED: Homo sapiens misc_RNA (LOC642513), miscRNA.					
Homo sapiens	RefSeq	NM_017759.2	ILMN_19726	FLJ20309	NM_017759.2	NM_017759.2		54891	38488717	NM_017759.2	FLJ20309	NP_060229.2	ILMN_1757978	0002260736	S	3453	GCCCACTCCGCCCCAGTGGTTTCCTTAGTGGTTCAGCACAGTGACTGGAT	2	-	206577073-206577122	2q33.3b	Homo sapiens hypothetical protein FLJ20309 (FLJ20309), mRNA.					
Homo sapiens	RefSeq	XM_001714524.1	ILMN_343606	LOC100131368	XM_001714524.1	XM_001714524.1		100131368	169214771	XM_001714524.1	LOC100131368	XP_001714576.1	ILMN_3242572	0003930465	S	1307	ACTCTCTTCACCGACTGAATAGCTCAAAGCCCGGGGTGATGGCAGCAGGG					PREDICTED: Homo sapiens similar to hCG1783157 (LOC100131368), mRNA.					
Homo sapiens	RefSeq	XM_926851.1	ILMN_38898	LOC286260	XM_926851.1	XM_926851.1		286260	89030128	XM_926851.1	LOC286260	XP_931944.1	ILMN_1712171	0000460626	A	1917	GGAGTACCCCAAGCATCCTCACGTGGTTAGCAGGGAAACCTTGGCATCTC	9	-	139099118-139099167		PREDICTED: Homo sapiens hypothetical protein LOC286260 (LOC286260), mRNA.					
Homo sapiens	Unigene	Hs.538554	ILMN_103974	HS.538554	Hs.538554		Hs.538554		4987481	AI699581			ILMN_1875887	0003390681	S	87	aCTATCGAAGTGACCGAGTACTTATCAACAGTGGAAGGGGGGTCAACTTG	10	+	28649512-28649561		tt17f06.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2241059 3, mRNA sequence					
Homo sapiens	Unigene	Hs.140841	ILMN_77885	HS.140841	Hs.140841		Hs.140841		27839577	BX115647			ILMN_1818534	0004290392	S	208	CAGCCTCCCACAGCTGGTATGTTGGGCAGACAGAGGGTGAGAAAGGGAGA	9	+	115887391-115887440		BX115647 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGp998J13148, mRNA sequence					
Homo sapiens	RefSeq	NM_175735.3	ILMN_18138	LYG2	NM_175735.3	NM_175735.3		254773	31652254	NM_175735.3	LYG2	NP_783862.2	ILMN_1691606	0001570379	S	743	AAGCTTCTAGGCAAAGCTCTGTGGGTGGGCCAGGTTGGCAGAGTGCTCAG	2	-	99858786-99858826:99858827-99858835	2q11.2c	Homo sapiens lysozyme G-like 2 (LYG2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	LYGH; MGC119049; MGC119047; MGC119046	LYGH; MGC119049; MGC119047; MGC119046
Homo sapiens	RefSeq	NM_138392.1	ILMN_25466	SHKBP1	NM_138392.2	NM_138392.2		92799	142386366	NM_138392.2	SHKBP1	NP_612401.1	ILMN_1765493	0003800307	S	2078	TCCAGCGGTCTCGGCACTCCCCTCACACCTCCCAAGATGAAGCTCAATGA	19	+	45788891-45788940	19q13.2b	Homo sapiens SH3KBP1 binding protein 1 (SHKBP1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Sb1; PP203	Sb1; PP203
Homo sapiens	RefSeq	NM_080916.1	ILMN_30347	DGUOK	NM_080918.1	NM_080918.1		1716	18426970	NM_080918.1	DGUOK	NP_550440.1	ILMN_1743432	0000430242	A	745	CAGCCCCTCTCATCCCTGGAGCACTCTGCCGCTCAAGAGCTGGTTTGTTA	2	+	74039461-74039510	2p13.1b	Homo sapiens deoxyguanosine kinase (DGUOK), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8692979] [evidence TAS]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The chemical reactions and pathways involving guanine, guanine riboside, a nucleoside with a wide species distribution [goid 8617] [pmid 8692979] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + deoxyguanosine = ADP + dGMP [goid 4138] [evidence IEA]; Catalysis of the reaction: ATP + deoxyguanosine = ADP + dGMP [goid 4138] [pmid 8692979] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]	dGK	dGK
Homo sapiens	RefSeq	NM_174917.1	ILMN_25307	ACSF3	NM_174917.1	NM_174917.1		197322	28372536	NM_174917.1	ACSF3	NP_777577.1	ILMN_1716832	0005820142	S	3413	CGCCAGAGGCCTGGACCCAAGGGAACGGCAGTCAGAGACTACAGTCCAGA	16	+	87749528-87749577	16q24.3a	Homo sapiens acyl-CoA synthetase family member 3 (ACSF3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 17762044] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid and a thiol via a carbon-sulfur bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16878] [pmid 17762044] [evidence IDA]	FLJ39242	FLJ39242
Homo sapiens	RefSeq	NM_138435.1	ILMN_20733	FAM83F	NM_138435.1	NM_138435.1		113828	19923962	NM_138435.1	FAM83F	NP_612444.1	ILMN_1683231	0007560056	S	1859	CCCCACGCCACTCCCCACCCAAGAGATTGGTGGAATAAAAGGGAAGAGGG	22	+	38755923-38755972	22q13.1e	Homo sapiens family with sequence similarity 83, member F (FAM83F), mRNA.					
Homo sapiens	RefSeq	NM_006120.2	ILMN_14424	HLA-DMA	NM_006120.2	NM_006120.2		3108	18765714	NM_006120.2	HLA-DMA	NP_006111.2	ILMN_1695311	0000540563	S	1015	CCAGAGTGGCCTGCCTATCACAACCACATCCCTTCCCCCCACAAGGCAAT	6	-	33024380-33024429	6p21.32a	Homo sapiens major histocompatibility complex, class II, DM alpha (HLA-DMA), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A type of late endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm [goid 5771] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IEA]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IEA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IEA]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IEA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IEA]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IEA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IEA]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IEA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 8034636] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10631952] [evidence TAS]	HLADM; RING6; DMA; D6S222E	HLADM; RING6; DMA; D6S222E
Homo sapiens	RefSeq	NM_001001852.2	ILMN_165494	PIM3	NM_001001852.2	NM_001001852.2		415116	52138581	NM_001001852.2	PIM3	NP_001001852.1	ILMN_1789781	0004480437	I	933	CGTGCACCGCGACATTAAGGACGAAAATCTGCTTGTGGACCTGCGCTCCG	22	+	48741345-48741394	22q13.33a	Homo sapiens pim-3 oncogene (PIM3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	pim-3	pim-3
Homo sapiens	RefSeq	NM_001039933.1	ILMN_37874	CD79B	NM_001039933.1	NM_001039933.1		974	90193591	NM_001039933.1	CD79B	NP_001035022.1	ILMN_2366212	0000770167	A	1214	GCCTCCAGTGCCTTCCCCCGTGGAATAAACGGTGTGTCCTGAGAAACCAC	17	-	62006098-62006147	17q23.3b	Homo sapiens CD79b molecule, immunoglobulin-associated beta (CD79B), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8486355] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; A membrane-bound antigen receptor complex consisting in its basic form of an antigen-binding subunit (the membrane immunoglobulin or mIg), comprised of two identical heavy chains and two identical light chains held together by disulfide bonds, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins [goid 19815] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8486355] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	IGB; B29	IGB; B29
Homo sapiens	RefSeq	NR_001530.1	ILMN_11324	TTTY9A	NR_001530.1	NR_001530.1		83864	32563533	NR_001530.1	TTTY9A		ILMN_1796326	0002340142	S	181	AATTTTCAGATGCGGACAAGCTAACTTCTAAGGATTATGAGTAATTCGAC	Y	+	19353009-19353058	Yq11.222a	Homo sapiens testis-specific transcript, Y-linked 9A (non-protein coding) (TTTY9A), non-coding RNA.				TTTY9; TTY9	TTTY9; TTY9
Homo sapiens	RefSeq	NM_021805.1	ILMN_18194	SIGIRR	NM_021805.1	NM_021805.1		59307	11141876	NM_021805.1	SIGIRR	NP_068577.1	ILMN_1736965	0005860373	I	505	TGGGGCCTTCACCTGCTCCATCCAGAACATCAGCTTCTCCTCCTTCACTC	11	-	398084-398133	11p15.5d	Homo sapiens single immunoglobulin and toll-interleukin 1 receptor (TIR) domain (SIGIRR), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10346978] [evidence IMP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of the cytokine and chemokine mediated signaling pathway [goid 1960] [evidence ISS]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31665] [pmid 15866876] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 12925853] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45079] [evidence ISS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12925853] [evidence IPI]	TIR8; MGC110992	TIR8; MGC110992
Homo sapiens	RefSeq	XM_374179.3	ILMN_40287	LOC389422	XM_374179.3	XM_374179.3		389422	88997662	XM_374179.3	LOC389422	XP_374179.2	ILMN_1656492	0002750082	S	154	AACTGAAGTCTGAGATAGAAGAGCAGGGAGCTCTTCAGGGAACAGCTAAT	6	+	109611927-109611976		PREDICTED: Homo sapiens hypothetical LOC389422 (LOC389422), mRNA.					
Homo sapiens	RefSeq	NM_015642.2	ILMN_27339	ZBTB20	NM_015642.3	NM_015642.3		26137	142350002	NM_015642.3	ZBTB20	NP_056457.2	ILMN_1689456	0003440189	S	2554	GCTCCGTCTGCCCAGCAAAGTTTGACCAAATCGAGCAGTTCAACGACCAC	3	-	115540568-115540617	3q13.31a-q13.31b	Homo sapiens zinc finger and BTB domain containing 20 (ZBTB20), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp566F123; ODA-8S; HOF; ZNF288; DPZF	DKFZp566F123; ODA-8S; HOF; ZNF288; DPZF
Homo sapiens	RefSeq	XM_086001.6	ILMN_41467	LOC148003	XM_086001.6	XM_086001.6		148003	89056779	XM_086001.6	LOC148003	XP_086001.2	ILMN_1659508	0005550692	A	181	GACACAGACTTGCAAATAGTTATGGTTGTGACTGAGTTTCTTCGTGACAC	19	+	44823164-44823164:44838232-44838280	19q13.2a	PREDICTED: Homo sapiens similar to Galactoside-binding soluble lectin 13 (Placental tissue protein 13) (Placenta protein 13) (PP13) (Galectin-13), transcript variant 1 (LOC148003), mRNA.					
Homo sapiens	RefSeq	NM_017838.3	ILMN_14673	NHP2	NM_017838.3	NM_017838.3		55651	53729323	NM_017838.3	NHP2	NP_060308.1	ILMN_3231390	0000130673	I	389	AGGAGACACACTGCCCATTGAGGTATACTGCCATCTCCCAGTCATGTGTG	5	-	177577929-177577978	5q35.3b	Homo sapiens NHP2 ribonucleoprotein homolog (yeast) (NHP2), transcript variant 1, mRNA.				NHP2P; NHP2	NHP2P; NHP2
Homo sapiens	RefSeq	NM_144605.1	ILMN_17535	SEPT12	NM_144605.2	NM_144605.2		124404	142365511	NM_144605.2	SEPT12	NP_653206.1	ILMN_1788061	0001260102	S	1123	AGGTCTGCAGGGGGGCCCATGACGATTCTGATGATGAGTTCTGACCACCG	16	-	4767792-4767798:4767799-4767841	16p13.3b	Homo sapiens septin 12 (SEPT12), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ25410	FLJ25410
Homo sapiens	RefSeq	XM_001721898.1	ILMN_342859	LOC643894	XM_001721898.1	XM_001721898.1		643894	169216756	XM_001721898.1	LOC643894	XP_001721950.1	ILMN_3208542	0006370438	A	1038	GGTAGCAGCACAAGTAAAGGGAACTAGGTATCGCCAGAAGAAGAGGGTGG	X	+	153463201-153463220:153463274-153463303	Xq28g	PREDICTED: Homo sapiens similar to hCG1744064 (LOC643894), mRNA.					
Homo sapiens	RefSeq	NM_152457.1	ILMN_16613	ZNF597	NM_152457.1	NM_152457.1		146434	22748966	NM_152457.1	ZNF597	NP_689670.1	ILMN_2162358	0001300519	S	1324	GGACTCAGAACTTGCATGCCACCAGAAGAGCCACATGCTAGCGGAACCTT	16	-	3486509-3486558	16p13.3c	Homo sapiens zinc finger protein 597 (ZNF597), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ33071	FLJ33071
Homo sapiens	RefSeq	NM_033124.2	ILMN_22276	CCDC65	NM_033124.2	NM_033124.2		85478	24475729	NM_033124.2	CCDC65	NP_149115.1	ILMN_2227195	0002370228	S	1454	GACGAGCCCAGCTGCTAGATATCAATGGGAAGCTGCGGGAGATGCTGAAG	12	+	47601302-47601351	12q13.12a	Homo sapiens coiled-coil domain containing 65 (CCDC65), mRNA.				FLJ25663; NYD-SP28; FLJ35732	FLJ25663; NYD-SP28; FLJ35732
Homo sapiens	RefSeq	XM_941757.1	ILMN_40406	LOC652331	XM_941757.1	XM_941757.1		652331	89062662	XM_941757.1	LOC652331	XP_946850.1	ILMN_1794452	0004280114	S	384	GTCCACTGTTCCAATTGTGTCCAAGTGGATGTTGAATAACATAGTTTGCC					PREDICTED: Homo sapiens similar to complement factor H-related 1 (LOC652331), mRNA.					
Homo sapiens	RefSeq	NM_002375.3	ILMN_165139	MAP4	NM_002375.3	NM_002375.3		4134	47519638	NM_002375.3	MAP4	NP_002366.2	ILMN_1708064	0002340364	I	2352	TCACAGGAACGGGGAAAAAGTGCAGCTTGCCGGCCGAGGAGGATTCTGTG	3	-	47931376-47931425	3p21.31f	Homo sapiens microtubule-associated protein 4 (MAP4), transcript variant 1, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 1905296] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 1905296] [evidence TAS]	DKFZp779A1753; MGC8617	DKFZp779A1753; MGC8617
Homo sapiens	RefSeq	XM_938250.1	ILMN_32339	LOC649184	XM_938250.1	XM_938250.1		649184	89038928	XM_938250.1	LOC649184	XP_943343.1	ILMN_1739434	0006040095	S	358	GGCTATGGAGAGTTTTCCTTAACAGGGCGCTGCAAATGTTCCCGCTCCTC					PREDICTED: Homo sapiens hypothetical protein LOC649184 (LOC649184), mRNA.					
Homo sapiens	RefSeq	XM_928247.1	ILMN_30629	LOC441528	XM_928247.1	XM_928247.1		441528	89059469	XM_928247.1	LOC441528	XP_933340.1	ILMN_1703881	0004880523	S	1240	GATCAGAGGGAGAGGCAGGCGCTCTTTGACTTATCAAGCTGCTCCCTGAG	X	-	3795225-3795274	Xp22.33a	PREDICTED: Homo sapiens hypothetical protein LOC441528 (LOC441528), mRNA.					
Homo sapiens	Unigene	Hs.278285	ILMN_84362	HS.278285	Hs.278285		Hs.278285		12224851	AL512695			ILMN_1878019	0005570424	S	5164	CTAGCTGAACTACGTTTTGGGATGAGATGCAAAGCAACAGCTGTCCCTGG	18	+	65666721-65666770		Homo sapiens mRNA; cDNA DKFZp547G133 (from clone DKFZp547G133)					
Homo sapiens	RefSeq	NM_032045.3	ILMN_28429	KREMEN1	NM_032045.3	NM_032045.3		83999	24041011	NM_032045.3	KREMEN1	NP_114434.3	ILMN_1788936	0004290731	I	2314	GGATGACGGGTGATGCTAGATGGATGTGTACCTGGTGGATGGCCCACGCA	22	+	27893916-27893965	22q12.1c	Homo sapiens kringle containing transmembrane protein 1 (KREMEN1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11267660] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [pmid 11267660] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KREMEN; FLJ31863; KRM1	KREMEN; FLJ31863; KRM1
Homo sapiens	RefSeq	XM_933141.1	ILMN_31400	LOC645781	XM_933141.2	XM_933141.2		645781	113428071	XM_933141.2	LOC645781	XP_938234.2	ILMN_1793445	0006380309	S	743	CGCCATCGCGGTGTCTGCCTCAGGACGAGGCGTGCGCCGACACTGGCAGT	19	+	7887817-7887827:7888358-7888396	19p13.2e	PREDICTED: Homo sapiens similar to mCG141871 (LOC645781), mRNA.					
Homo sapiens	RefSeq	NM_053044.2	ILMN_28233	HTRA3	NM_053044.2	NM_053044.2		94031	24475740	NM_053044.2	HTRA3	NP_444272.1	ILMN_1812669	0004060703	S	2208	GGAGCACGTGGAAAGTTGGCTGCTGCCTGGGGAAGTTTTTCCTCCCCAAG	4	+	8308505-8308554	4p16.1d	Homo sapiens HtrA serine peptidase 3 (HTRA3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Prsp; Tasp	Prsp; Tasp
Homo sapiens	RefSeq	XM_001126659.2	ILMN_165453	LOC728026	XM_001126659.2	XM_001126659.2		728026	169181036	XM_001126659.2	LOC728026	XP_001126659.1	ILMN_3206101	0005340181	A	1397	CTGTCTCAGAATCTAAACGTAGTCACCTTCCAGTATTGAGGCCCGCCCCC	9	-	96149221-96149270	9q22.32a	PREDICTED: Homo sapiens hypothetical LOC728026 (LOC728026), mRNA.					
Homo sapiens	RefSeq	XM_001126659.2	ILMN_165453	LOC728026	XM_001126659.2	XM_001126659.2		728026	169181036	XM_001126659.2	LOC728026	XP_001126659.1	ILMN_3231881	0001990154	I	2017	TCTGACTTTACTTGTGGTGTGACCATGTTCATTATAATCTCAAAGGAGGA	9	-	96148601-96148650	9q22.32a	PREDICTED: Homo sapiens hypothetical LOC728026 (LOC728026), mRNA.					
Homo sapiens	RefSeq	NM_182827.1	ILMN_163240	FKBP9L	NM_182827.1	NM_182827.1		360132	33469942	NM_182827.1	FKBP9L	NP_878247.1	ILMN_1781585	0006180438	S	225	GGCCTCAAGGAGGAAGAAGAAACATGCGTTCCTGGATGACTGAGTTCTGG	7	-	55724214-55724263	7p11.2b	Homo sapiens FK506 binding protein 9-like (FKBP9L), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC20531; FKBP9	MGC20531; FKBP9
Homo sapiens	RefSeq	NM_182827.1	ILMN_163240	FKBP9L	NM_182827.1	NM_182827.1		360132	33469942	NM_182827.1	FKBP9L	NP_878247.1	ILMN_2089977	0005700451	S	2180	AGCTGCTGCAAGACAGCAATGACAGTCCACCTGCCGGCCTGATTCCTGCA	7	-	55716482-55716531	7p11.2b	Homo sapiens FK506 binding protein 9-like (FKBP9L), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC20531; FKBP9	MGC20531; FKBP9
Homo sapiens	RefSeq	XM_372159.3	ILMN_180255	C9ORF172	NM_001080482.2	NM_001080482.2		389813	148762977	NM_001080482.2	C9orf172	NP_001073951.2	ILMN_1677274	0004850608	A	2757	CGTCTACGAGCAGCTTTGCGAGTTCGTCGAGGCCAACAGGCGCTTCACGC	9	+	138861444-138861493	9q34.3e	Homo sapiens chromosome 9 open reading frame 172 (C9orf172), mRNA.					
Homo sapiens	RefSeq	NM_006248.1	ILMN_30241	PRB2	NM_006248.1	NM_006248.1		440083	60301552	NM_006248.1	PRB2	NP_006239.1	ILMN_1662989	0006450719	S	845	CCGAGCTCCTCCAGGAAAGCCACAAGGACCACCCCAACAAGAAGGCAACA	12	-	11397432-11397481	12p13.2b	Homo sapiens proline-rich protein BstNI subfamily 2 (PRB2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	cP7; Ps; PRPPRB1	cP7; Ps; PRPPRB1
Homo sapiens	RefSeq	NM_003106.2	ILMN_13292	SOX2	NM_003106.2	NM_003106.2		6657	29826338	NM_003106.2	SOX2	NP_003097.1	ILMN_1770635	0005080273	S	1550	GAGAACACCAATCCCATCCACACTCACGCAAAAACCGCGATGCCGACAAG	3	+	181431271-181431320	3q26.33b	Homo sapiens SRY (sex determining region Y)-box 2 (SOX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7849401] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [pmid 7849401] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7849401] [evidence NAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, e.g. melanin [goid 46148] [evidence IEA]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IEA]; The series of events involved in equilibrioception in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. During equilibrioception, mechanical stimuli may be in the form of input from pressure receptors or from the labyrinth system of the inner ears [goid 50973] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7849401] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ANOP3; MGC2413; MCOPS3	ANOP3; MGC2413; MCOPS3
Homo sapiens	RefSeq	NM_003859.1	ILMN_27900	DPM1	NM_003859.1	NM_003859.1		8813	4503362	NM_003859.1	DPM1	NP_003850.1	ILMN_2105308	0002360519	S	611	CTAAAGGCTACGTCTTCCAGATGGAGATGATTGTTCGGGCAAGACAGTTG	20	-	49552702-49552751	20q13.13f	Homo sapiens dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit (DPM1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10835346] [evidence EXP]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 9724629] [evidence IDA]; A complex that posseses mannosyltransferase activity [goid 31501] [pmid 16280320] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [pmid 9535917] [evidence IDA]; The glycosylation of a peptidyl-tryptophan residue by the transfer of alpha-mannopyranose from dolichyl-activated mannose to the indole ring [goid 18406] [pmid 16280320] [evidence TAS]; The transfer of mannose from dolichyl activated mannose to the hydroxyl group of a seryl or threonyl residue of a protein acceptor molecule, to form an O-linked protein-sugar linkage [goid 35269] [pmid 9535917] [evidence IDA]	Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein [goid 4169] [pmid 9535917] [evidence IDA]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [pmid 9535917] [evidence IDA]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [pmid 10835346] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16280320] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MPDS; CDGIE	MPDS; CDGIE
Homo sapiens	RefSeq	NM_003859.1	ILMN_27900	DPM1	NM_003859.1	NM_003859.1		8813	4503362	NM_003859.1	DPM1	NP_003850.1	ILMN_1658992	0005670626	S	493	AGCCGTGGGGCCAATTTTTTAACTCAGATCTTGCTGAGACCAGGAGCATC	20	-	49557422-49557470:49558568-49558568	20q13.13f	Homo sapiens dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit (DPM1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10835346] [evidence EXP]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 9724629] [evidence IDA]; A complex that posseses mannosyltransferase activity [goid 31501] [pmid 16280320] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [pmid 9535917] [evidence IDA]; The glycosylation of a peptidyl-tryptophan residue by the transfer of alpha-mannopyranose from dolichyl-activated mannose to the indole ring [goid 18406] [pmid 16280320] [evidence TAS]; The transfer of mannose from dolichyl activated mannose to the hydroxyl group of a seryl or threonyl residue of a protein acceptor molecule, to form an O-linked protein-sugar linkage [goid 35269] [pmid 9535917] [evidence IDA]	Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein [goid 4169] [pmid 9535917] [evidence IDA]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [pmid 9535917] [evidence IDA]; Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [pmid 10835346] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16280320] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MPDS; CDGIE	MPDS; CDGIE
Homo sapiens	RefSeq	NM_001621.2	ILMN_138365	AHR	NM_001621.2	NM_001621.2		196	5016091	NM_001621.2	AHR	NP_001612.1	ILMN_1812640	0004890672	S	4990	GGCCAAGATCGCCCCACTGCACTCCAGCCTGGCAATAGACCGAGCTCCGT	7	+	17351414-17351463	7p21.1b	Homo sapiens aryl hydrocarbon receptor (AHR), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10395741] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10395741] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10395741] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 12213388] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 7961644] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 12213388] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a xenobiotic compound stimulus. Xenobiotic compounds are compounds foreign to living organisms [goid 9410] [pmid 7961644] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11782478] [evidence IDA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [pmid 10395741] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 9079689] [evidence IPI]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [pmid 9079689] [evidence IDA]		
Homo sapiens	RefSeq	XM_001715870.1	ILMN_336442	LOC100129407	XM_001715870.1	XM_001715870.1		100129407	169216300	XM_001715870.1	LOC100129407	XP_001715922.1	ILMN_3178295	0002570047	A	264	TGTGTCTGACGCCACGGAGGACCCATCCGGTGGCACAGGCTTGCCCAGGG				Xq13.1e	PREDICTED: Homo sapiens similar to hCG1993257 (LOC100129407), mRNA.					
Homo sapiens	RefSeq	NR_031612.1	ILMN_388540	MIR1207	NR_031612.1	NR_031612.1		100302175	269847112	NR_031612.1	MIR1207		ILMN_3308758	0007150021	S	37	TCTGGTAGTGGGCATCAGCTGGCCCTCATTTCTTAAGACAGCACTTCTGT					Homo sapiens microRNA 1207 (MIR1207), microRNA.					
Homo sapiens	RefSeq	XM_939894.1	ILMN_37047	LOC650804	XM_939894.1	XM_939894.1		650804	89059323	XM_939894.1	LOC650804	XP_944987.1	ILMN_1697203	0004890379	S	63	CCCCTGTGATAGTGGGCATAATGTCATCGTCTCCCAACGTGGATATTGGG					PREDICTED: Homo sapiens hypothetical protein LOC650804 (LOC650804), mRNA.					
Homo sapiens	RefSeq	NM_012434.3	ILMN_2681	SLC17A5	NM_012434.3	NM_012434.3		26503	34222139	NM_012434.3	SLC17A5	NP_036566.1	ILMN_1684434	0001770471	S	2758	TGGGGTCTCGTTTTGTCGCCCAGGCTGGTTTTGAACTCCTGGCTTCAAGC	6	-	74360288-74360337	6q13c	Homo sapiens solute carrier family 17 (anion/sugar transporter), member 5 (SLC17A5), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10581036] [evidence TAS]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 10581036] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10581036] [evidence TAS]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [pmid 10581036] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [pmid 10581036] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	SIASD; FLJ23268; NSD; SLD; SD; FLJ22227; ISSD; AST; SIALIN	SIASD; FLJ23268; NSD; SLD; SD; FLJ22227; ISSD; AST; SIALIN
Homo sapiens	RefSeq	NM_030753.3	ILMN_1260	WNT3	NM_030753.3	NM_030753.3		7473	21536426	NM_030753.3	WNT3	NP_110380.1	ILMN_1803593	0004070615	S	1314	ACGCGTGGTAAATGACCCAGACCCAACTCGCCTGTGGACGGGGAGGCTCT	17	-	44841819-44841868	17q21.32a	Homo sapiens wingless-type MMTV integration site family, member 3 (WNT3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence NAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC131950; MGC138321; INT4; MGC138323	MGC131950; MGC138321; INT4; MGC138323
Homo sapiens	RefSeq	NM_015205.1	ILMN_13005	ATP11A	NM_015205.2	NM_015205.2		23250	150421683	NM_015205.2	ATP11A	NP_056020.2	ILMN_1674217	0001170139	I	3435	CTGTCGAGCAGTCAACCATCTTTATGCTTTCTCAGACTTCCAGCAGCCTG	13	+	112580551-112580600	13q34c	Homo sapiens ATPase, class VI, type 11A (ATP11A), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ATPIH; ATPIS	ATPIH; ATPIS
Homo sapiens	RefSeq	XM_936553.1	ILMN_42198	GPR158L1	XM_936553.1	XM_936553.1		440435	89042640	XM_936553.1	GPR158L1	XP_941646.1	ILMN_1762188	0000070390	S	748	AAGCCAGACCTCAGCCCAGAAGTCAGCCCCAACTTACTCACCTACATCTG				17q12c	PREDICTED: Homo sapiens GPR158-like 1 (GPR158L1), mRNA.					
Homo sapiens	RefSeq	XM_943173.1	ILMN_30569	LOC648001	XM_943173.1	XM_943173.1		648001	88945291	XM_943173.1	LOC648001	XP_948266.1	ILMN_1668663	0000160601	S	345	TCATGCTCAGAGAGCCTGCAGGACCGCTGTGGGGCCACTGCCACCCTGTG					PREDICTED: Homo sapiens hypothetical protein LOC648001 (LOC648001), mRNA.					
Homo sapiens	RefSeq	NM_181528.2	ILMN_43222	NAT5	NM_181528.2	NM_181528.2		51126	89993684	NM_181528.2	NAT5	NP_852669.1	ILMN_2354140	0006380082	A	324	GTCACAGCTCTGTCTGTTGCCCCAGAATTTCGACGCCTTGGTTTGGCTGC	20	+	19955478-19955527	20p11.23b	Homo sapiens N-acetyltransferase 5 (GCN5-related, putative) (NAT5), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ1002M8.1; NAT3	dJ1002M8.1; NAT3
Homo sapiens	RefSeq	NM_181528.1	ILMN_43222	NAT5	NM_181528.2	NM_181528.2		51126	89993684	NM_181528.2	NAT5	NP_852669.1	ILMN_1689097	0001570414	A	785	GACTTGCTCCAGTCTCCTCCTCAGTTCTGTGCCTGAGAACCACTGCTGCA	20	+	19962121-19962170	20p11.23b	Homo sapiens N-acetyltransferase 5 (GCN5-related, putative) (NAT5), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ1002M8.1; NAT3	ARD1; dJ1002M8.1
Homo sapiens	RefSeq	NM_000054.2	ILMN_182286	AVPR2	NM_000054.2	NM_000054.2		554	4895106	NM_000054.2	AVPR2	NP_000045.1	ILMN_1698324	0001510025	S	1521	TCCACATCCCCAGCTGTATGAGGAGAGCTTCAGGCCCCAGGACTGTGGGG	X	+	152825551-152825600	Xq28f	Homo sapiens arginine vasopressin receptor 2 (nephrogenic diabetes insipidus) (AVPR2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10858434] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10880054] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10880054] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10749568] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1303257] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8999963] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 10880054] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 9224808] [evidence TAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 1303257] [evidence TAS]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [pmid 10880054] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [pmid 8999963] [evidence TAS]	DI1; V2R; MGC126533; DIR; NDI; DIR3; ADHR; MGC138386	DI1; V2R; DIR; MGC126533; DIR3; ADHR; NDI
Homo sapiens	RefSeq	NM_016075.2	ILMN_13830	VPS36	NM_016075.2	NM_016075.2		51028	71051597	NM_016075.2	VPS36	NP_057159.2	ILMN_1802519	0001510091	S	4240	CTGGTTTGTTCATGGATGTATTCTAAGAGCTGAGAACAGGGCCTGGACAC	13	-	52986870-52986919	13q14.3d	Homo sapiens vacuolar protein sorting 36 homolog (S. cerevisiae) (VPS36), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [evidence IEA]	EAP45; DKFZp781E0871; C13orf9; CGI-145	EAP45; DKFZp781E0871; C13orf9; CGI-145
Homo sapiens	RefSeq	XM_379141.3	ILMN_35367	DKFZP686O1327	XM_379141.3	XM_379141.3		401014	88957930	XM_379141.3	DKFZp686O1327	XP_379141.3	ILMN_1717482	0002120440	S	4275	GCCCCAGGTCCAAGGGTGGCATCTGTTTGGATTGGTTGTTACATGTGCTG					PREDICTED: Homo sapiens hypothetical gene supported by BC043549; BX648102 (DKFZp686O1327), mRNA.					
Homo sapiens	RefSeq	NM_001290.2	ILMN_2220	LDB2	NM_001290.2	NM_001290.2		9079	49574520	NM_001290.2	LDB2	NP_001281.1	ILMN_1800697	0004830148	S	2229	GCTCTCACCTGGTTCTTTTATGGGGACTTTTCGTTTTTGGGCAACTCCAG	4	-	16112426-16112475	4p15.32c	Homo sapiens LIM domain binding 2 (LDB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9853615] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 9880598] [evidence TAS]; Interacting selectively with a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions [goid 30274] [evidence ISS]	LDB1; CLIM1	LDB1; CLIM1
Homo sapiens	RefSeq	NM_024638.2	ILMN_162497	QTRTD1	NM_024638.2	NM_024638.2		79691	31542681	NM_024638.2	QTRTD1	NP_078914.1	ILMN_2155516	0002490204	S	3586	GGGCATCCTCATAACTCTTCCATGAATGGCAAGGGGTACTTATGGAAAAC	3	+	113806859-113806908	3q13.31a	Homo sapiens queuine tRNA-ribosyltransferase domain containing 1 (QTRTD1), mRNA.		The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents [goid 8616] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine [goid 8479] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12960	FLJ12960
Homo sapiens	RefSeq	NM_024638.2	ILMN_162497	QTRTD1	NM_024638.2	NM_024638.2		79691	31542681	NM_024638.2	QTRTD1	NP_078914.1	ILMN_1733407	0001660333	S	3365	ACAAGACTCAGAGCAAGAAGTCACTTATCACCAAGGGGATGGCCCAGGCC	3	+	113806638-113806687	3q13.31a	Homo sapiens queuine tRNA-ribosyltransferase domain containing 1 (QTRTD1), mRNA.		The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents [goid 8616] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine [goid 8479] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12960	FLJ12960
Homo sapiens	RefSeq	NM_205842.1	ILMN_8043	NCKAP1	NM_205842.1	NM_205842.1		10787	45545410	NM_205842.1	NCKAP1	NP_995314.1	ILMN_2409451	0003930615	A	2273	GCACAGAACAGTGTACCCTTAGTGACCAGTTGCTACCCAAGCATTGTGCC	2	-	183822303-183822324:183826887-183826914	2q32.1a	Homo sapiens NCK-associated protein 1 (NCKAP1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10673335] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 10673335] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11418237] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15294869] [evidence IPI]	FLJ11291; NAP125; HEM2; NAP1; MGC8981; KIAA0587	FLJ11291; NAP125; NAP1; KIAA0587; HEM2; MGC8981
Homo sapiens	RefSeq	NM_205850.1	ILMN_11877	SLC24A5	NM_205850.2	NM_205850.2		283652	84697035	NM_205850.2	SLC24A5	NP_995322.1	ILMN_1786045	0006350609	S	791	GAGAGAAGTGAACAACAGCCACTGATGGGCTGGGAAGATGAAGGTCAACC	15	+	46216299-46216348	15q21.1c	Homo sapiens solute carrier family 24, member 5 (SLC24A5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	JSX; SHEP4; NCKX5	JSX; NCKX5
Homo sapiens	RefSeq	NM_002676.1	ILMN_17005	PMM1	NM_002676.1	NM_002676.1		5372	4505904	NM_002676.1	PMM1	NP_002667.1	ILMN_1780236	0004890408	S	1060	GAAGAGGTTTCTTTCTGCACCAGGAGGAGGCGTGCTCAAGTATCGGTACG	22	-	40302951-40303000	22q13.2a	Homo sapiens phosphomannomutase 1 (PMM1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose [goid 19307] [evidence IEA]	Catalysis of the reaction: D-mannose 1-phosphate = D-mannose 6-phosphate [goid 4615] [pmid 9070917] [evidence TAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	Sec53	Sec53
Homo sapiens	RefSeq	XM_001713633.1	ILMN_335610	LOC100134366	XM_001713633.1	XM_001713633.1		100134366	169163832	XM_001713633.1	LOC100134366	XP_001713685.1	ILMN_3236179	0005900408	S	2511	CCTCTCGGAAAGGAGCAAAACTTTGCTCAGATCCCAGAATTAACCTGATT					PREDICTED: Homo sapiens hypothetical protein LOC100134366 (LOC100134366), mRNA.					
Homo sapiens	RefSeq	NM_017442.2	ILMN_183558	TLR9	NM_017442.2	NM_017442.2		54106	20302169	NM_017442.2	TLR9	NP_059138.1	ILMN_1679798	0001820440	S	3676	CAGGGACAACCACCACTTCTATAACCGGAACTTCTGCCAGGGACCCACGG	3	-	52255240-52255289	3p21.1e	Homo sapiens toll-like receptor 9 (TLR9), transcript variant A, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11130078] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 16024789] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 14625308] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 14751759] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 15207506] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 11130078] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [pmid 16286015] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-alpha [goid 45356] [pmid 16286015] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [pmid 16286015] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme [goid 35197] [pmid 15723075] [evidence IMP]	CD289	CD289
Homo sapiens	RefSeq	NM_001137560.1	ILMN_371715	TMEM151B	NM_001137560.1	NM_001137560.1		441151	212274326	NM_001137560.1	TMEM151B	NP_001131032.1	ILMN_3247088	0001050767	S	4255	ACCTGCCCTTTGGGGACACAGTTCTGGAGGCTCTGGGCCAATGAATCAGC	6	+	44246818-44246867	6p21.1b	Homo sapiens transmembrane protein 151B (TMEM151B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_927720.1	ILMN_44692	LOC653493	XM_927720.1	XM_927720.1		653493	89042085	XM_927720.1	LOC653493	XP_932813.1	ILMN_1651325	0007610086	S	133	GAGAGCGGTTCAGGTGTTCTCCGAAGCCGCCGCGCAGTCTGTGAGATGTT	17	+	8135-8167:11776-11792		PREDICTED: Homo sapiens similar to Nitric oxide synthase, inducible (NOS type II) (Inducible NOS) (iNOS) (Hepatocyte NOS) (HEP-NOS) (LOC653493), mRNA.					
Homo sapiens	RefSeq	NM_006042.1	ILMN_21069	HS3ST3A1	NM_006042.1	NM_006042.1		9955	5174464	NM_006042.1	HS3ST3A1	NP_006033.1	ILMN_1692056	0001500139	S	2149	TGTTCTCACTCCCGCCCCATCTTAATGTATAACCAACACCAAACACGTGG	17	-	13445168-13445171:13445172-13445217	17p12c	Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 (HS3ST3A1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9988767] [evidence TAS]		Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [pmid 9988767] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate [goid 33872] [evidence IEA]	3OST3A1; 30ST3A1	3OST3A1; 30ST3A1
Homo sapiens	RefSeq	NM_012180.2	ILMN_166083	FBXO8	NM_012180.2	NM_012180.2		26269	48928043	NM_012180.2	FBXO8	NP_036312.2	ILMN_1672843	0003420647	S	1862	GGACTTAGCAGATATGGGGGTTACATCAGTGCTGGTCATTGTAGCCTGAG	4	-	175395036-175395085	4q34.1c	Homo sapiens F-box protein 8 (FBXO8), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10945468] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10945468] [evidence NAS]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence NAS]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	FBS; FBX8; DC10	FBS; FBX8; DC10
Homo sapiens	RefSeq	XM_933461.1	ILMN_41303	LOC646191	XM_933461.1	XM_933461.1		646191	88942552	XM_933461.1	LOC646191	XP_938554.1	ILMN_1752035	0004210343	S	1	ATGGGTTCTGGCCTACACCCCTGGGTGGTGCTGAGGCCTGAGGGGAGTGC	1	+	22472749-22472798		PREDICTED: Homo sapiens hypothetical protein LOC646191 (LOC646191), mRNA.					
Homo sapiens	RefSeq	XM_933085.1	ILMN_34855	LOC653344	XM_933085.1	XM_933085.1		653344	89038536	XM_933085.1	LOC653344	XP_938178.1	ILMN_1693836	0005310681	A	2221	GGAGCCCCTTGGAGTATGGCTTTTCACATGGGCTTCTATACCGCTTCGAC	15	+	80772681-80772730		PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130, transcript variant 2 (LOC653344), mRNA.					
Homo sapiens	RefSeq	XR_042295.1	ILMN_340301	KRT18P34	XR_042295.1	XR_042295.1		391589	169165218	XR_042295.1	KRT18P34		ILMN_3259275	0003800564	M	815	AACACAGGGGTCACCACGCAGTCCGTCGAGGTTGGAGCTGCTATAACGCT	3	-	158363551-158363600	3q25.32a	PREDICTED: Homo sapiens misc_RNA (KRT18P34), miscRNA.					
Homo sapiens	RefSeq	NM_201444.2	ILMN_15179	DGKA	NM_201444.2	NM_201444.2		1606	41872487	NM_201444.2	DGKA	NP_958852.1	ILMN_1661544	0004780156	I	138	TCGGAAAAGGACAGGGGTAGGGAAGCCGAGGACCCACGGGCTGCGTTCGT	12	+	54612216-54612265	12q13.2c	Homo sapiens diacylglycerol kinase, alpha 80kDa (DGKA), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 2175712] [evidence TAS]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 2175712] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]	MGC42356; DGK-alpha; DAGK1; MGC12821; DAGK	MGC42356; DGK-alpha; DAGK1; MGC12821; DAGK
Homo sapiens	RefSeq	XM_931304.1	ILMN_40361	LOC643085	XM_931304.2	XM_931304.2		643085	113413083	XM_931304.2	LOC643085	XP_936397.1	ILMN_1742381	0001410047	S	127	CATGGAGCGCGGCGTCAGCGCGGACAGCTCGCAGTCCCTGAGCCTCTGCA	2	-	95556029-95556078	2q11.1c	PREDICTED: Homo sapiens hypothetical LOC643085 (LOC643085), mRNA.					
Homo sapiens	RefSeq	NM_033343.2	ILMN_29425	LHX4	NM_033343.2	NM_033343.2		89884	30410786	NM_033343.2	LHX4	NP_203129.1	ILMN_1674366	0002710445	S	1779	GCCTCCCAAAACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGC	1	+	178510720-178510769	1q25.2c	Homo sapiens LIM homeobox 4 (LHX4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The process whereby differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of medial motor column neurons. Medial motor column neurons are generated at all rostrocaudal levels and send axons to the axial muscles (medial group) and to the body wall muscles (lateral group). Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21526] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Gsh4; Gsh-4	Gsh4; Gsh-4
Homo sapiens	RefSeq	XM_939922.1	ILMN_34537	LOC650836	XM_939922.1	XM_939922.1		650836	89037617	XM_939922.1	LOC650836	XP_945015.1	ILMN_1683296	0004920446	S	329	GTGCCGTGAATGCCACAGTGTCTGGGACTGCAAAGGGAGCTGAACACAAA					PREDICTED: Homo sapiens similar to T-cell receptor alpha chain V region PHDS58 precursor (LOC650836), mRNA.					
Homo sapiens	RefSeq	XM_373027.3	ILMN_43142	LOC391656	XM_373027.4	XM_373027.4		391656	113415604	XM_373027.4	LOC391656	XP_373027.3	ILMN_1706117	0006770315	S	62	GCAAACGCCAGGTGCTTCTTAGGCCGTGCTCCGAAGTCATCATCCGGTTT	4	-	62654251-62654300	4q13.1c	PREDICTED: Homo sapiens similar to hCG1640454 (LOC391656), mRNA.					
Homo sapiens	RefSeq	NR_004405.1	ILMN_350124	LAMB2L	NR_004405.1	NR_004405.1		22973	161169044	NR_004405.1	LAMB2L		ILMN_3242152	0003780612	S	1232	CCCTCCAGTGGTACCTGTCACTGCAAATGCTTTGTCTCTGGGCAGGACGG	3	-	49190553-49190602		Homo sapiens laminin, beta 2-like (LAMB2L), non-coding RNA.					
Homo sapiens	RefSeq	Hs.449213	ILMN_172593	LOC389120	XR_019244.1	XR_019244.1		389120	113415069	XR_019244.1	LOC389120		ILMN_1902172	0006400040	S	3161	GCGCAGGCCGAGGTGGACTTTGTGCTTCCAGACAAGCAGGTTATCACGCT				3p21.31c	PREDICTED: Homo sapiens hypothetical LOC389120 (LOC389120), mRNA.					
Homo sapiens	RefSeq	NM_019036.1	ILMN_19171	HMGCLL1	NM_019036.1	NM_019036.1		54511	46195724	NM_019036.1	HMGCLL1	NP_061909.1	ILMN_1716377	0005810703	S	2280	AAGTCAGGGATGAGGAGCAGGAGGACTATTCAAGATAAACTTCTGTAACC	6	-	55407334-55407383	6p12.1b	Homo sapiens 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 (HMGCLL1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetyl-CoA + acetoacetate [goid 4419] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	DKFZP434G1411; bA418P12.1	DKFZP434G1411; bA418P12.1
Homo sapiens	RefSeq	NM_004136.1	ILMN_27178	IREB2	NM_004136.2	NM_004136.2		3658	133925807	NM_004136.2	IREB2	NP_004127.1	ILMN_1726554	0006840240	S	3763	CATATTTCAGCAGTTTGCCACTGTGACTGTCTGGCAAGCCCCCAGATGGC	15	+	76578249-76578298	15q25.1a	Homo sapiens iron-responsive element binding protein 2 (IREB2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7983023] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX [goid 6782] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process of regulating the production and elimination of erythrocytes within an organism [goid 34101] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX [goid 6782] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process of regulating the production and elimination of erythrocytes within an organism [goid 34101] [evidence IEA]	Interacting selectively with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins [goid 30350] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7983023] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins [goid 30350] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	IRP2AD; ACO3; FLJ23381; IRP2	IRP2AD; ACO3; FLJ23381; IRP2
Homo sapiens	RefSeq	NM_144976.2	ILMN_1977	ZNF564	NM_144976.2	NM_144976.2		163050	74229675	NM_144976.2	ZNF564	NP_659413.1	ILMN_2217212	0000580681	S	2285	CCCCCACAATGTGATGGTATTTGGAGGCCCTGTCTCTGGTGGTTTTTAGG	19	-	12497758-12497807	19p13.2a	Homo sapiens zinc finger protein 564 (ZNF564), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC26914	MGC26914
Homo sapiens	RefSeq	NM_001008226.1	ILMN_4387	FAM154B	NM_001008226.1	NM_001008226.1		283726	60223082	NM_001008226.1	FAM154B	NP_001008227.1	ILMN_2184884	0000430722	S	2675	ATGTAGGTAATTTTGCACCTAATTGCCAGGCCAAGTCACTGTTTAGAGGA	15	+	80363867-80363916	15q25.2a	Homo sapiens family with sequence similarity 154, member B (FAM154B), mRNA.				DKFZp666G057	DKFZp666G057
Homo sapiens	RefSeq	XM_001126695.2	ILMN_171430	LOC728142	XM_001126695.2	XM_001126695.2		728142	169216927	XM_001126695.2	LOC728142	XP_001126695.2	ILMN_3296121	0007160309	M	947	CCTTTTCAACCCTTTTGAGTCTGAGGGGCAGCTGTACATTAAATGAAACC	X	+	40482533-40482582	Xp11.4b	PREDICTED: Homo sapiens hypothetical LOC728142 (LOC728142), mRNA.					
Homo sapiens	RefSeq	XM_497514.1	ILMN_42418	LOC441771	XM_939612.2	XM_939612.2		441771	113426453	XM_939612.2	LOC441771	XP_944705.2	ILMN_1677076	0000780082	A	281	AGCTCTGTTCCCCCTCCCACCGGCTTGCCTGCTTCTTCGCCTCTGGCTTA				16q13b	PREDICTED: Homo sapiens similar to Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II) (Metallothionein-2A) (LOC441771), mRNA.					
Homo sapiens	RefSeq	NM_152480.1	ILMN_11822	C19ORF23	NM_152480.1	NM_152480.1		148046	22749010	NM_152480.1	C19orf23	NP_689693.1	ILMN_1657148	0002570669	S	1247	TTGCGTAATTCTTGCCGCTCCCCCCAGCCCATCGTTCCCTGGTTCTGTGA	19	-	1218529-1218578	19p13.3i	Homo sapiens chromosome 19 open reading frame 23 (C19orf23), mRNA.				MGC39338	MGC39338
Homo sapiens	RefSeq	NM_001005190.1	ILMN_29975	OR7A10	NM_001005190.1	NM_001005190.1		390892	52353343	NM_001005190.1	OR7A10	NP_001005190.1	ILMN_1711557	0003370221	S	479	GCTTAATGGTGTTGCCACTGCCCTTTTGTACACACATGGAAATCCCTCAT	19	-	14952161-14952210	19p13.12b	Homo sapiens olfactory receptor, family 7, subfamily A, member 10 (OR7A10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR19-18; BC85395_3	BC85395_3; OR19-18
Homo sapiens	RefSeq	NM_173590.1	ILMN_183884	C11ORF36	NM_173590.1	NM_173590.1		283303	27734786	NM_173590.1	C11orf36	NP_775861.1	ILMN_1788756	0003140719	S	1661	GTTACACAGCCACAGGCCAAGGAGGGCCAGAGCCACCAGAAGCTGAAAGA	11	+	3200775-3200824	11p15.4d	Homo sapiens chromosome 11 open reading frame 36 (C11orf36), mRNA.				HSD-40; MGC132631; MGC132633; FLJ36102	HSD-40; FLJ36102
Homo sapiens	RefSeq	XM_001725175.1	ILMN_349754	LOC100128319	XM_001725175.1	XM_001725175.1		100128319	169169299	XM_001725175.1	LOC100128319	XP_001725227.1	ILMN_3270021	0000540528	M	68	CCTCAAACTCTGAAGCAAACACTGATGAAGGCAACTTAATTCCAGTCCTT	6	-	144209056-144209060:144212964-144213008	6q24.2b	PREDICTED: Homo sapiens similar to putative protein STRF7 (LOC100128319), mRNA.					
Homo sapiens	RefSeq	NM_001001523.1	ILMN_27024	RORC	NM_001001523.1	NM_001001523.1		6097	48255917	NM_001001523.1	RORC	NP_001001523.1	ILMN_1734366	0004070091	A	2633	ACCACTAGAAGACCCAAGAGAAGCAGAAGTCGCTCGCACTGGTCAGTCGG	1	-	151778900-151778949	1q21.3a	Homo sapiens RAR-related orphan receptor C (RORC), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129539; RZRG; NR1F3; RORG; TOR	MGC129539; RZRG; NR1F3; RORG; TOR
Homo sapiens	RefSeq	NM_001001523.1	ILMN_27024	RORC	NM_001001523.1	NM_001001523.1		6097	48255917	NM_001001523.1	RORC	NP_001001523.1	ILMN_2275399	0004560180	I	99	GAGAAGGACAGGGAGCCAAGGCCGGCAGAGCCAAGGCTCAGTCATGAGAA	1	-	151789756-151789756:151798406-151798412:151798413-151798454	1q21.3a	Homo sapiens RAR-related orphan receptor C (RORC), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129539; RZRG; NR1F3; RORG; TOR	MGC129539; RZRG; NR1F3; RORG; TOR
Homo sapiens	RefSeq	NM_001001523.1	ILMN_27024	RORC	NM_001001523.1	NM_001001523.1		6097	48255917	NM_001001523.1	RORC	NP_001001523.1	ILMN_1771126	0004890553	A	2543	GGGACCCTCCCAAACATTTCCATGGTGCTCCAGTCCACTGATCTTGGGTC	1	-	151778990-151779039	1q21.3a	Homo sapiens RAR-related orphan receptor C (RORC), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129539; RZRG; NR1F3; RORG; TOR	MGC129539; RZRG; NR1F3; RORG; TOR
Homo sapiens	RefSeq	NM_024092.1	ILMN_7335	TMEM109	NM_024092.1	NM_024092.1		79073	13129091	NM_024092.1	TMEM109	NP_076997.1	ILMN_2092756	0006130193	S	1693	CTTCTCTCCCCATCGCTCCACAACCTGAAACCGAGAAGGAGTTGCTGACC	11	+	60447102-60447151	11q12.2a	Homo sapiens transmembrane protein 109 (TMEM109), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the sarcoplasmic reticulum [goid 33017] [evidence IEA]			MGC5508	MGC5508
Homo sapiens	RefSeq	XR_042419.1	ILMN_333782	LOC730187	XR_042419.1	XR_042419.1		730187	169164148	XR_042419.1	LOC730187		ILMN_3296979	0006770554	M	187	GCCTGGAGACGTTTCTACTGGTACCTTCATCTGCCCCCGGAGATTGTGCC				2p14c	PREDICTED: Homo sapiens misc_RNA (LOC730187), miscRNA.					
Homo sapiens	RefSeq	NM_014889.2	ILMN_22239	PITRM1	NM_014889.2	NM_014889.2		10531	41352060	NM_014889.2	PITRM1	NP_055704.2	ILMN_1698072	0001510072	S	3098	TCCTCGGACCCGAGAACCCGAAAATTGCCAAGGACCCATCCTGGATCATC	10	-	3190421-3190470	10p15.2b	Homo sapiens pitrilysin metallopeptidase 1 (PITRM1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 16849325] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 16849325] [evidence IMP]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 16849325] [evidence IMP]; Increases the activity of an enzyme [goid 8047] [pmid 9733512] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC141929; KIAA1104; MP1; MGC138192; hMP1	MGC141929; KIAA1104; MP1; MGC138192; hMP1
Homo sapiens	RefSeq	NM_018947.4	ILMN_182949	CYCS	NM_018947.4	NM_018947.4		54205	34328939	NM_018947.4	CYCS	NP_061820.1	ILMN_1730416	0006200554	S	5048	CCCACATAAGTCTCTTCTAGGCACTGTCGGGGTACATACTGAGCTGCTGC	7	-	25158685-25158734	7p15.2c	Homo sapiens cytochrome c, somatic (CYCS), nuclear gene encoding mitochondrial protein, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 8206937] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 8689682] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8689682] [evidence IMP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9267021] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9922454] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9390557] [evidence EXP]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 8689682] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 8689682] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [pmid 9267021] [evidence TAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [pmid 10383829] [evidence TAS]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8206937] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9267021] [evidence IPI]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [pmid 9515723] [evidence TAS]; Enables the directed movement of electrons from the CoQH2-cytochrome c reductase complex and the cytochrome c oxidase complex [goid 45155] [pmid 8689682] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CYC; HCS	CYC; HCS
Homo sapiens	RefSeq	NM_006662.1	ILMN_15071	SRCAP	NM_006662.2	NM_006662.2		10847	146219842	NM_006662.2	SRCAP	NP_006653.2	ILMN_1750641	0007510687	S	9764	CTAGTCCCCCCACTAGAGACTGAGAAGTTGCCTCGCAAACGAGCAGGGGC	16	+	30658241-30658290	16p11.2c	Homo sapiens Snf2-related CREBBP activator protein (SRCAP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10347196] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10347196] [evidence TAS]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [pmid 10347196] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	EAF1; SWR1; DOMO1; KIAA0309; FLJ44499	KIAA0309
Homo sapiens	RefSeq	XM_927702.1	ILMN_37149	LOC644586	XM_927702.1	XM_927702.1		644586	89025109	XM_927702.1	LOC644586	XP_932795.1	ILMN_1670524	0000670270	S	121	GCTTTTTGCTGGTTTTCGCCCCTGCCGCCGCGGCTTTTTGCCCCCGCCTC	7	-	64612207-64612256		PREDICTED: Homo sapiens similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (LOC644586), mRNA.					
Homo sapiens	RefSeq	NR_030351.1	ILMN_388107	MIR620	NR_030351.1	NR_030351.1		693205	262206097	NR_030351.1	MIR620		ILMN_3309239	0000130554	S	45	GATATCTCCATATATATGGAGATAGATATAGAAATAAAACAAGCAAAGAA					Homo sapiens microRNA 620 (MIR620), microRNA.					
Homo sapiens	RefSeq	NM_173670.2	ILMN_13578	RGMB	NM_173670.2	NM_173670.2		285704	61676198	NM_173670.2	RGMB	NP_775941.1	ILMN_1710479	0000060291	I	2265	GTGTCCCGACTAACCACCTCCTTCCGTGTCTTTTCCAACCACAAAACCAC	5	+	98144543-98144592	5q21.1a	Homo sapiens RGM domain family, member B (RGMB), transcript variant 2, mRNA.	A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence ISS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISS]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	FLJ90406; MGC86970; DRAGON	FLJ90406; MGC86970; DRAGON
Homo sapiens	RefSeq	NM_173670.2	ILMN_13578	RGMB	NM_173670.2	NM_173670.2		285704	61676198	NM_173670.2	RGMB	NP_775941.1	ILMN_1773696	0005490181	A	904	AGGTGACTGCCAACAGCCAGCCCAATGTCGAATCCAGAAATGCACCACGG	5	+	98137809-98137810:98143184-98143231	5q21.1a	Homo sapiens RGM domain family, member B (RGMB), transcript variant 2, mRNA.	A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence ISS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISS]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	FLJ90406; MGC86970; DRAGON	FLJ90406; MGC86970; DRAGON
Homo sapiens	RefSeq	XM_001720768.1	ILMN_340744	LOC100129239	XM_001720768.1	XM_001720768.1		100129239	169216710	XM_001720768.1	LOC100129239	XP_001720820.1	ILMN_3259774	0002570711	M	1	ATTCAGTATGGCAAAGGTGACCAGTGAGCCACAGAAGCCTAATGAAGATG	X	-	145703890-145703933:145703934-145703939	Xq27.3d	PREDICTED: Homo sapiens hypothetical protein LOC100129239 (LOC100129239), mRNA.					
Homo sapiens	RefSeq	NM_145910.1	ILMN_10349	NEK11	NM_145910.2	NM_145910.2		79858	141801899	NM_145910.2	NEK11	NP_665917.1	ILMN_1813645	0006480427	A	1243	TAATTAATGCCATGCAAAAAAGGATCCACCTGCAGACTCTGAGGGCACTG	3	+	132356643-132356655:132363942-132363978	3q22.1a-q22.1b	Homo sapiens NIMA (never in mitosis gene a)- related kinase 11 (NEK11), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 15161910] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 15161910] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 15161910] [evidence IDA]; The slowing of DNA synthesis in response to DNA damage by the prevention of new origin firing and the stabilization of slow replication fork progession [goid 31573] [pmid 15161910] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 15161910] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 15161910] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15161910] [evidence IPI]	FLJ23495	FLJ23495
Homo sapiens	RefSeq	NM_001013357.1	ILMN_11627	OR8U9	NM_001013357.1	NM_001013357.1		504190	61656211	NM_001013357.1	OR8U9	NP_001013375.1	ILMN_1695366	0005720181	S	278	CGTTCAATGCATGTGCTGCTCAGTTAGGCTGTTTCCTGGCCTTCATGACG					Homo sapiens olfactory receptor, family 8, subfamily U, member 9 (OR8U9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_001013357.1	ILMN_11627	OR8U9	NM_001013357.1	NM_001013357.1		504190	61656211	NM_001013357.1	OR8U9	NP_001013375.1	ILMN_2102356	0007330564	S	531	CTATTGTGATGACATGCCTCTCCTCAGGCTAACTTGCTCAGACACTCGCT					Homo sapiens olfactory receptor, family 8, subfamily U, member 9 (OR8U9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	XM_001715692.1	ILMN_343217	LOC100134406	XM_001715692.1	XM_001715692.1		100134406	169209658	XM_001715692.1	LOC100134406	XP_001715744.1	ILMN_3242299	0002690669	S	175	TGCCTGGGCCTTAAAACCCCGCCTGCAGCCGAGAGCCCGCAGAGTCCCCA					PREDICTED: Homo sapiens similar to HCTP4-binding protein (LOC100134406), mRNA.					
Homo sapiens	RefSeq	NM_007209.3	ILMN_11814	RPL35	NM_007209.3	NM_007209.3		11224	78190471	NM_007209.3	RPL35	NP_009140.1	ILMN_2142815	0001170164	S	415	GGCCTGAGGGGCGCATTGTCAATAAAGCACAGCTGGCTGAGACTGCAAAA	9	-	126664057-126664061:127620158-127620196:127620197-127620202	9q33.3a	Homo sapiens ribosomal protein L35 (RPL35), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 2891103] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 2891103] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 2891103] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 2891103] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_199350.1	ILMN_179811	C9ORF50	NM_199350.3	NM_199350.3		375759	145701004	NM_199350.3	C9orf50	NP_955382.3	ILMN_1701873	0003840048	S	1543	GAGGAGCGTCCTTCCTTGCCCCACAAATAAAGGCACATCCCAGGTGGCTG	9	-	132374531-132374580	9q34.11d	Homo sapiens chromosome 9 open reading frame 50 (C9orf50), mRNA.				FLJ35803	FLJ35803
Homo sapiens	RefSeq	XR_015615.2	ILMN_171830	LOC729660	XR_015615.2	XR_015615.2		729660	169162837	XR_015615.2	LOC729660		ILMN_3304821	0004230273	M	174	GCAACAGCGGGTTTTGCAGACGCTCTTCTCCAGCCGGAGCTGGGACTGTT	1	-	241284555-241284604	1q43f	PREDICTED: Homo sapiens misc_RNA (LOC729660), miscRNA.					
Homo sapiens	RefSeq	NM_018456.4	ILMN_519	EAF2	NM_018456.4	NM_018456.4		55840	41350199	NM_018456.4	EAF2	NP_060926.2	ILMN_1708798	0006770600	S	719	CTGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAGG	3	+	121591519-121591568	3q13.33c	Homo sapiens ELL associated factor 2 (EAF2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17395368] [evidence IPI]	TRAITS; BM040; U19	TRAITS; BM040; U19
Homo sapiens	RefSeq	NM_001005465.1	ILMN_20653	OR10G3	NM_001005465.1	NM_001005465.1		26533	53793668	NM_001005465.1	OR10G3	NP_001005465.1	ILMN_1726523	0002810554	S	820	GCCCTAGTCCCCACGGCCATCACTCCTTTCCTCAACCCCCTTATCTACAC	14	-	22038006-22038055	14q11.2d	Homo sapiens olfactory receptor, family 10, subfamily G, member 3 (OR10G3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR14-40	OR14-40
Homo sapiens	RefSeq	NM_001014763.1	ILMN_6383	ETFB	NM_001014763.1	NM_001014763.1		2109	62420876	NM_001014763.1	ETFB	NP_001014763.1	ILMN_1684758	0001070035	I	369	AAACTCTAACCCAGTTCTGTCCCTGGAGCTGTGTGACCCCGGACAAGGCC	19	-	56549490-56549539	19q13.33d	Homo sapiens electron-transfer-flavoprotein, beta polypeptide (ETFB), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8617498] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8504797] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 7912128] [evidence TAS]	MADD; FP585	FP585; MADD
Homo sapiens	RefSeq	NM_001014763.1	ILMN_6383	ETFB	NM_001014763.1	NM_001014763.1		2109	62420876	NM_001014763.1	ETFB	NP_001014763.1	ILMN_2300970	0006770343	A	1217	CCAAGCTGAAGGAGATTGGGCGGATTTGAGCCCCTCCCAGAGATGGCAAT	19	-	56540255-56540276:56540277-56540304	19q13.33d	Homo sapiens electron-transfer-flavoprotein, beta polypeptide (ETFB), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8617498] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8504797] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 7912128] [evidence TAS]	MADD; FP585	FP585; MADD
Homo sapiens	RefSeq	NM_000615.1	ILMN_7059	NCAM1	NM_000615.1	NM_000615.1		4684	10834989	NM_000615.1	NCAM1	NP_000606.1	ILMN_1791588	0003170397	I	2851	TTCTAGGCTAGTTTCTGGTCTTATCATTGAGTTACAGCTTAGTGATGATT				11q23.1d	Homo sapiens neural cell adhesion molecule 1 (NCAM1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3576199] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 3576199] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10770948] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD56; NCAM; MSK39	CD56; NCAM; MSK39
Homo sapiens	RefSeq	NM_000615.1	ILMN_7059	NCAM1	NM_000615.1	NM_000615.1		4684	10834989	NM_000615.1	NCAM1	NP_000606.1	ILMN_1702305	0001010767	A	2573	ATGATGGAGGGAAACACACAGAGCCCAACGAGACCACGCCACTGACGGAG	11	+	112647779-112647808:112651199-112651218	11q23.1d	Homo sapiens neural cell adhesion molecule 1 (NCAM1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3576199] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 3576199] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10770948] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD56; NCAM; MSK39	CD56; NCAM; MSK39
Homo sapiens	RefSeq	XM_001716749.1	ILMN_336179	LOC100133860	XM_001716749.1	XM_001716749.1		100133860	169204618	XM_001716749.1	LOC100133860	XP_001716801.1	ILMN_3236575	0002060762	S	630	GCTCCATGGCAAAAGATCTCAAGATCTCAGCACCAAGTTAGAAAAGTCAC					PREDICTED: Homo sapiens similar to MSTP058 (LOC100133860), mRNA.					
Homo sapiens	RefSeq	NM_138422.1	ILMN_5119	ADAT3	NM_138422.1	NM_138422.1		113179	19923944	NM_138422.1	ADAT3	NP_612431.1	ILMN_1806275	0002230253	S	1339	CTGGACTTCCGGGCCTCGATTTCTTCCGCACAAGCCTGACCGTGGATTTC	19	+	1864205-1864254	19p13.3h	Homo sapiens adenosine deaminase, tRNA-specific 3, TAD3 homolog (S. cerevisiae) (ADAT3), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TAD3; MSTP121; MST121; S863-5; FWP005	TAD3; MSTP121; MST121; S863-5; FWP005
Homo sapiens	RefSeq	NM_152453.2	ILMN_25640	TMCO5A	NM_152453.2	NM_152453.2		145942	34303931	NM_152453.2	TMCO5A	NP_689666.2	ILMN_1652719	0005220711	S	1000	AGGGAAGTGGGATCCGAGCCTGTAGAAGGGAGGCATGAAACTTGTGGAGG	15	+	36030757-36030806	15q14c	Homo sapiens transmembrane and coiled-coil domains 5A (TMCO5A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC35118; FLJ35807	MGC35118; FLJ35807
Homo sapiens	Unigene	Hs.285193	ILMN_84764	HS.285193	Hs.285193		Hs.285193		31127168	BC052811			ILMN_1864370	0000010372	S	603	GCACAGGTGGAAGATATGTGGGTCTGGAACTCCGTGTATGCTTCCTTGAG	15	-	36151405-36151422:36151541-36151572		Homo sapiens cDNA clone IMAGE:6166085, partial cds					
Homo sapiens	RefSeq	XM_001723647.1	ILMN_341443	LOC728175	XM_001723647.1	XM_001723647.1		728175	169167179	XM_001723647.1	LOC728175	XP_001723699.1	ILMN_3283458	0002320386	M	246	GAAGACGCCACAGACAGCAGCGCAGTACCACCTTCCAGAGATGTCAGAGC				4q35.1d	PREDICTED: Homo sapiens hypothetical LOC728175 (LOC728175), mRNA.					
Homo sapiens	RefSeq	XM_928745.1	ILMN_42405	LOC643475	XM_928745.2	XM_928745.2		643475	113421329	XM_928745.2	LOC643475	XP_933838.1	ILMN_1766741	0007650561	S	3109	AGGAAACTGAGGTTTGGGCAGACTAAGCAACTGGCCCAGAACATCACAGC	10	-	22884476-22884525	10p12.2a	PREDICTED: Homo sapiens FLJ00409 protein (LOC643475), mRNA.					
Homo sapiens	RefSeq	NM_144997.4	ILMN_26114	FLCN	NM_144997.4	NM_144997.4		201163	51317377	NM_144997.4	FLCN	NP_659434.2	ILMN_1670008	0001090075	I	2950	GCCCAATCCCCTGGATATGGTGAGCCCCGCCATGCTTTTATTCTGTATCG	17	-	17056932-17056981	17p11.2h	Homo sapiens folliculin (FLCN), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18403135] [evidence IPI]	FLCL; BHD; MGC23445; MGC17998	FLCL; BHD; MGC23445; MGC17998
Homo sapiens	RefSeq	NR_024435.1	ILMN_371442	LOC100133991	NR_024435.1	NR_024435.1		100133991	212549581	NR_024435.1	LOC100133991		ILMN_3290052	0002100072	M	1210	GGCATTATGTTCTGGGTCCCATTCTGTGTCGGGTTCTCTTTTCACTCGGC	17	+	43345947-43345996		Homo sapiens similar to hCG1995169 (LOC100133991), non-coding RNA.					
Homo sapiens	RefSeq	XM_001727018.1	ILMN_339970	LOC644525	XM_001727018.1	XM_001727018.1		644525	169215683	XM_001727018.1	LOC644525	XP_001727070.1	ILMN_3281727	0003190673	M	472	GTAGAGAGGGGTGACCAGCACAGCTCCAGCCAGAAGCTCCCACACTGCTC				22q11.1c	PREDICTED: Homo sapiens hypothetical LOC644525 (LOC644525), mRNA.					
Homo sapiens	RefSeq	NM_130436.1	ILMN_18884	DYRK1A	NM_130436.2	NM_130436.2		1859	116734669	NM_130436.2	DYRK1A	NP_569120.1	ILMN_1794156	0005820445	I	872	CCACTTGGAGAGCAAGAGGGCTTGTGGACTTGGGGGAGCGGTTGTGAGAA	21	+	37713948-37713997	21q22.13b	Homo sapiens dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A (DYRK1A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISS]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8769099] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 9748265] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence ISS]	HP86; DYRK; DYRK1; MNBH; MNB	HP86; DYRK; DYRK1; MNBH; MNB
Homo sapiens	RefSeq	NM_205853.1	ILMN_7570	MUSTN1	NM_205853.2	NM_205853.2		389125	148727356	NM_205853.2	MUSTN1	NP_995325.2	ILMN_1773814	0003940368	S	570	TTTTTATGCCAGAACGCTTCCTCTCCCCTGCTGTCTCTGGGGCTGCCACC	3	-	52867225-52867274	3p21.1c	Homo sapiens musculoskeletal, embryonic nuclear protein 1 (MUSTN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			Mustang; DKFZp686G21125	Mustang
Homo sapiens	RefSeq	NM_170710.3	ILMN_12792	WDR17	NM_170710.3	NM_170710.3		116966	55925652	NM_170710.3	WDR17	NP_733828.2	ILMN_1746552	0002810168	A	3085	ATGGCATACCTGATTCGCGGAAATGAACTGGAGTTGGCAGTCTGTGTGGG	4	+	177084311-177084360	4q34.2a	Homo sapiens WD repeat domain 17 (WDR17), transcript variant 1, mRNA.				FLJ26618	FLJ26618
Homo sapiens	RefSeq	NM_033091.1	ILMN_8530	TRIM4	NM_033091.1	NM_033091.1		89122	15011940	NM_033091.1	TRIM4	NP_149082.1	ILMN_2323385	0002810674	A	2595	CCTCAGTCTACCCTTCTGCTCTAGATTGTCTGGACTCAGGAGATTGTGGC	7	-	99488696-99488745	7q22.1b	Homo sapiens tripartite motif-containing 4 (TRIM4), transcript variant beta, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF87	RNF87
Homo sapiens	RefSeq	NM_033017.2	ILMN_8530	TRIM4	NM_033091.1	NM_033091.1		89122	15011940	NM_033091.1	TRIM4	NP_149082.1	ILMN_1792265	0004390470	A	3096	CTGTTCATGTGTTGGTTTGCTTAGGGTAATGGCCTCCAGCTCCATCCATG	7	-	99488195-99488244	7q22.1b	Homo sapiens tripartite motif-containing 4 (TRIM4), transcript variant beta, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF87	RNF87
Homo sapiens	RefSeq	NM_024808.2	ILMN_162859	C13ORF34	NM_024808.2	NM_024808.2		79866	38505206	NM_024808.2	C13orf34	NP_079084.2	ILMN_1761486	0000580719	S	1835	GTTCCTCGCATATATCGTTGTGCACAGGATCAACATGATGGTGACTGGGA	13	+	72227391-72227440	13q22.1a	Homo sapiens chromosome 13 open reading frame 34 (C13orf34), mRNA.				BORA; RP11-342J4.2; FLJ22624	BORA; RP11-342J4.2; FLJ22624
Homo sapiens	RefSeq	NR_029617.1	ILMN_389054	MIR196A2	NR_029617.1	NR_029617.1		406973	262206257	NR_029617.1	MIR196A2		ILMN_3310461	0004040647	S	58	ACTCGGCAACAAGAAACTGCCTGAGTTACATCAGTCGGTTTTCGTCGAGG				12q13.13f	Homo sapiens microRNA 196a-2 (MIR196A2), microRNA.					
Homo sapiens	RefSeq	XM_001717752.1	ILMN_351600	LOC100128998	XM_001717752.1	XM_001717752.1		100128998	169214923	XM_001717752.1	LOC100128998	XP_001717804.1	ILMN_3234254	0003800669	I	802	CAGGTGACCCTGGAGAGTCCTTCCCCTCACTGTTCCCCAATGGCTATCTG				20q13.33e	PREDICTED: Homo sapiens similar to tissue plasminogen activator (LOC100128998), mRNA.					
Homo sapiens	RefSeq	XM_945026.1	ILMN_36908	LOC643449	XM_945026.2	XM_945026.2		643449	113416078	XM_945026.2	LOC643449	XP_950119.2	ILMN_1740166	0006650615	S	455	TACCTATGAACTGACAACTGTATCTTCAGTAATTACAATTTCCAACAAAT				4p12a	PREDICTED: Homo sapiens similar to hCG2041756 (LOC643449), mRNA.					
Homo sapiens	RefSeq	XM_926120.1	ILMN_44338	LOC653123	XM_926120.1	XM_926120.1		653123	89029281	XM_926120.1	LOC653123	XP_931213.1	ILMN_1753225	0006520524	S	181	GATGTGGAGGGAGCTCAGAGGCTGTCCTGGAGGAGACGTGGAGACAGCTC	9	+	41506232-41506232:41506233-41506281	9p12a	PREDICTED: Homo sapiens similar to FLJ45202 protein (LOC653123), mRNA.					
Homo sapiens	Unigene	Hs.567392	ILMN_119573	HS.567392	Hs.567392		Hs.567392		31874472	BX537622			ILMN_1885165	0006560025	S	2261	GCCAGTCCATGTCTCATTGATAGGATGTAGCCTGCCATCTGCATAGATGG	9	+	134558352-134558401		Homo sapiens mRNA; cDNA DKFZp686J12188 (from clone DKFZp686J12188)					
Homo sapiens	RefSeq	XM_935991.1	ILMN_27538	RPL6	NM_001024662.1	NM_001024662.1		6128	67189746	NM_001024662.1	RPL6	NP_001019833.1	ILMN_1712155	0004890615	A	721	CCTGAAGCAGCTGGCTAGTGGCTTATTACTTGTGACTGGACCTCTGGTCC	12	-	112843829-112843841:112844098-112844134	12q24.13a	Homo sapiens ribosomal protein L6 (RPL6), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 8479925] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8457378] [evidence TAS]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8457378] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8479925] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8479925] [evidence TAS]	SHUJUN-2; TXREB1; TAXREB107	
Homo sapiens	RefSeq	NM_001024662.1	ILMN_27538	RPL6	NM_001024662.1	NM_001024662.1		6128	67189746	NM_001024662.1	RPL6	NP_001019833.1	ILMN_1717490	0002630561	I	175	GGCCTTCCAGACGCTTCATTTTTGTTGTTTGGGTTTGCGGCAGGGCACAA	12	-	112847219-112847268	12q24.13a	Homo sapiens ribosomal protein L6 (RPL6), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 8479925] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8457378] [evidence TAS]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8457378] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8479925] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8479925] [evidence TAS]	SHUJUN-2; TXREB1; TAXREB107	SHUJUN-2; TXREB1; TAXREB107
Homo sapiens	RefSeq	NM_001024662.1	ILMN_27538	RPL6	NM_001024662.1	NM_001024662.1		6128	67189746	NM_001024662.1	RPL6	NP_001019833.1	ILMN_1690494	0001980520	A	1011	TCAAAGCTATTCCTCAGCTCCAGGGCTACCTGCGATCTGTGTTTGCTCTG	12	-	112843063-112843112	12q24.13a	Homo sapiens ribosomal protein L6 (RPL6), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 8479925] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8457378] [evidence TAS]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8457378] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8479925] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8479925] [evidence TAS]	SHUJUN-2; TXREB1; TAXREB107	SHUJUN-2; TXREB1; TAXREB107
Homo sapiens	RefSeq	NM_001943.3	ILMN_363655	DSG2	NM_001943.3	NM_001943.3		1829	189181754	NM_001943.3	DSG2	NP_001934.2	ILMN_3251672	0007560433	S	5446	GTGTACTCAAACAAAAGTTGGTCTTAAGCTTCCACCTTGAGCAGCCTTGG	18	+	29128607-29128656	18q12.1d	Homo sapiens desmoglein 2 (DSG2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_004894.1	ILMN_29919	C14ORF2	NM_004894.1	NM_004894.1		9556	4758939	NM_004894.1	C14orf2	NP_004885.1	ILMN_1652722	0002100341	S	398	GTACTGCTTTCAGTGTGTTCCCCCTCAGCCCCTCCGGCGTGTCAGGCATA	14	-	103448545-103448594	14q32.33a	Homo sapiens chromosome 14 open reading frame 2 (C14orf2), mRNA.				PLPM; MP68	PLPM; MP68
Homo sapiens	RefSeq	XM_929895.1	ILMN_31363	LOC653438	XM_929895.1	XM_929895.1		653438	88943185	XM_929895.1	LOC653438	XP_934988.1	ILMN_1751195	0004010438	A	985	GCATGCGCGTCGCCTTCCGCGACACCAAGAAGACCTACTGCTTCGACGCC	1	+	146088186-146088235		PREDICTED: Homo sapiens similar to CG33096-PB, isoform B, transcript variant 1 (LOC653438), mRNA.					
Homo sapiens	RefSeq	Hs.444961	ILMN_164484	LOC727944	XM_001126250.1	XM_001126250.1		727944	113413615	XM_001126250.1	LOC727944	XP_001126250.1	ILMN_1881598	0005270152	S	304	GAATGTCTCTAGGATGAAGGAATGAGCAGTGGGGAGCGTGGCTGGTCCCC				2p25.3g	PREDICTED: Homo sapiens similar to hCG2042412 (LOC727944), mRNA.					
Homo sapiens	RefSeq	XR_037042.1	ILMN_334115	LOC100132947	XR_037042.1	XR_037042.1		100132947	169177391	XR_037042.1	LOC100132947		ILMN_3198090	0002490647	A	382	GGCATTCTGCCCGGCGGTGGCGGCTGCACAGGGGCGAGAACTGAAAACCC	9	-	66229468-66229517	9q12g	PREDICTED: Homo sapiens misc_RNA (LOC100132947), miscRNA.					
Homo sapiens	RefSeq	NM_016633.2	ILMN_10251	AHSP	NM_016633.2	NM_016633.2		51327	56786141	NM_016633.2	AHSP	NP_057717.1	ILMN_1696512	0002350274	S	426	CTCTGACCTTCATGTCCTTAGGCTGTGCTCCTGCCACTCTACCCTGACAC	16	+	31447545-31447594	16p11.2c	Homo sapiens alpha hemoglobin stabilizing protein (AHSP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [pmid 12066189] [evidence NAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The chemical reactions and pathways involving hemoglobin, including its uptake and utilization [goid 20027] [pmid 12066189] [evidence NAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 12066189] [evidence NAS]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [evidence IEA]	Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [pmid 12066189] [evidence NAS]; Interacting selectively with an unfolded protein [goid 51082] [pmid 12066189] [evidence NAS]	AHSP; EDRF	AHSP; EDRF
Homo sapiens	RefSeq	XM_001718048.1	ILMN_338682	LOC100134222	XM_001718048.1	XM_001718048.1		100134222	169210327	XM_001718048.1	LOC100134222	XP_001718100.1	ILMN_3238657	0005360270	S	3	GGAAGATGAGGTGCCTGCTTTCTTCCAGGTAGTGAATTTCACGTGCCAGG					PREDICTED: Homo sapiens similar to hydrocephalus inducing (LOC100134222), mRNA.					
Homo sapiens	RefSeq	NM_144604.2	ILMN_13925	ZC3H18	NM_144604.2	NM_144604.2		124245	31377594	NM_144604.2	ZC3H18	NP_653205.2	ILMN_1658834	0002320279	S	3430	ATCCTTCTCCTCCCCCGCCCCTGATCACCCGCCCCCGGATCAGAAATATA	16	+	87225629-87225678	16q24.2b-q24.3a	Homo sapiens zinc finger CCCH-type containing 18 (ZC3H18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ34530; FLJ36075; NHN1; FLJ22664	FLJ34530; FLJ36075; NHN1; FLJ22664
Homo sapiens	RefSeq	XM_926216.1	ILMN_39466	LOC642809	XM_926216.1	XM_926216.1		642809	88953321	XM_926216.1	LOC642809	XP_931309.1	ILMN_1676941	0003890014	S	61	TTCATCAAGGGGATGATTCTTGGACGGACATCTTTTCCTCCCTCTTTCCA	2	+	91513925-91513974		PREDICTED: Homo sapiens similar to protein kinase CHK2 isoform b (LOC642809), mRNA.					
Homo sapiens	RefSeq	NM_016410.2	ILMN_21129	CHMP5	NM_016410.3	NM_016410.3		51510	142369570	NM_016410.3	CHMP5	NP_057494.2	ILMN_1732534	0007650347	S	600	CTGGCTGATGAAGACAGTTCTTATTTGGATGAGGCAGCATCTGCACCTGC	9	+	33268137-33268186	9p13.3e	Homo sapiens chromatin modifying protein 5 (CHMP5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate, or extent of receptor recyling [goid 1919] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]; The directed movement of substances from endosomes to lysosomes [goid 8333] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	C9orf83; SNF7DC2; CGI-34; PNAS-2; HSPC177	C9orf83; SNF7DC2; CGI-34; PNAS-2; HSPC177
Homo sapiens	RefSeq	NM_001042685.1	ILMN_183133	LGALS9B	NM_001042685.1	NM_001042685.1		284194	111494236	NM_001042685.1	LGALS9B	NP_001036150.1	ILMN_2113333	0001440192	S	622	CTGCCAACCCAGCTCCCATTACCCAGACAGTCATCCACACGGTGCAGAGC	17	-	20356350-20356380:20356885-20356903	17p11.2c	Homo sapiens lectin, galactoside-binding, soluble, 9B (LGALS9B), mRNA.					
Homo sapiens	RefSeq	XM_930339.1	ILMN_183133	LGALS9B	NM_001042685.1	NM_001042685.1		284194	111494236	NM_001042685.1	LGALS9B	NP_001036150.1	ILMN_1656869	0000610682	I	539	CTTCTCCACGGTGCCGTTCTCCCAGCCTGTCTGTTTCCCACCCAGGCCCA	17	-	20358632-20358681	17p11.2c	Homo sapiens lectin, galactoside-binding, soluble, 9B (LGALS9B), mRNA.					
Homo sapiens	RefSeq	NM_018093.1	ILMN_169915	WDR74	XM_001125771.1	XM_001125771.1		54663	113422854	XM_001125771.1	WDR74	XP_001125771.1	ILMN_1789775	0007380368	A	455	CGGGAGGCAACTCAGTGATTGTGGGAAACACTCATGGGCAGCTGGCAGAA				11q12.3b	PREDICTED: Homo sapiens WD repeat domain 74 (WDR74), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				FLJ10439; FLJ21730
Homo sapiens	RefSeq	XM_936269.1	ILMN_169915	WDR74	XM_001125771.1	XM_001125771.1		54663	113422854	XM_001125771.1	WDR74	XP_001125771.1	ILMN_1809866	0002190537	A	883	CCTGGGTCCACCAGCCCCTGACGCCCCTGTGCCCACTTTGTAAATAAACT				11q12.3b	PREDICTED: Homo sapiens WD repeat domain 74 (WDR74), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	RefSeq	NM_152386.2	ILMN_4626	SGPP2	NM_152386.2	NM_152386.2		130367	23510288	NM_152386.2	SGPP2	NP_689599.2	ILMN_1662140	0007210706	I	142	GTCGAGCATCTCCCCGCAGCCAACGGCAAGGGCGGCGAGGCTCCGGCCAA	2	+	222997707-222997756	2q36.1b-q36.1c	Homo sapiens sphingosine-1-phosphate phosphotase 2 (SGPP2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	SPP2; FLJ39004	SPP2; FLJ39004
Homo sapiens	Unigene	Hs.436868	ILMN_91790	HS.436868	Hs.436868		Hs.436868		5176920	AI761253			ILMN_1818248	0002470273	S	386	TGGGCTGATGTGCCAAGAATGGCTGAGGTTGGGTCTCAGTGGATGGCAGG	21	+	35027176-35027225		wi68f07.x1 NCI_CGAP_Kid12 Homo sapiens cDNA clone IMAGE:2398501 3, mRNA sequence					
Homo sapiens	RefSeq	NM_012360.1	ILMN_15673	OR1F1	NM_012360.1	NM_012360.1		4992	6912553	NM_012360.1	OR1F1	NP_036492.1	ILMN_1710243	0003940433	S	756	CAGCACCATCATTGCTGTGTATTTTAACCCTCTGTCCTCCCACTCAGCTG	16	+	3195003-3195052	16p13.3c	Homo sapiens olfactory receptor, family 1, subfamily F, member 1 (OR1F1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9500546] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR16-88; OLFMF; OR1F6; OR1F5; OR1F8; OR1F4; OR3-145; OR1F9; OR16-90; OR16-36; OR1F10; OR1F13P; OR16-37; ORL1023; OR1F7; OR16-89	OR16-88; OLFMF; OR1F6; OR1F5; OR1F8; OR1F4; OR3-145; OR1F9; OR16-90; OR16-36; OR1F10; OR1F13P; OR16-37; ORL1023; OR1F7; OR16-89
Homo sapiens	RefSeq	NM_001795.2	ILMN_179475	CDH5	NM_001795.2	NM_001795.2		1003	14589894	NM_001795.2	CDH5	NP_001786.1	ILMN_1719236	0004730482	S	3723	TTCGTCATGGACCGAGGTTCCCACTCTGGGCAAAGCCCCTCACACTGCAA	16	+	64995823-64995872	16q21e	Homo sapiens cadherin 5, type 2, VE-cadherin (vascular epithelium) (CDH5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9219219] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9219219] [evidence TAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 9219219] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 12088286] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CD144; 7B4	CD144; 7B4
Homo sapiens	RefSeq	NM_024293.2	ILMN_20437	FAM134A	NM_024293.3	NM_024293.3		79137	142376431	NM_024293.3	FAM134A	NP_077269.2	ILMN_1654851	0005080494	S	2289	GAGGCTCCTGGTCTGGGAAGTAAAGAGTAAACCTGGGGCAGTGGGTCAGG	2	+	219756131-219756180	2q35f	Homo sapiens family with sequence similarity 134, member A (FAM134A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC3035; C2orf17; DKFZp686C2379	MGC3035; DKFZp686C2379
Homo sapiens	RefSeq	NM_145270.1	ILMN_8431	C16ORF11	NM_145270.1	NM_145270.1		146325	21687187	NM_145270.1	C16orf11	NP_660313.1	ILMN_3245646	0006020437	S	1893	TGTCATTCCTGGCAGTGGCTGGGGCACCTGTGTTGCGACGAGGAGTTCCC	16	+	555206-555255	16p13.3f	Homo sapiens chromosome 16 open reading frame 11 (C16orf11), mRNA.					
Homo sapiens	RefSeq	NM_145270.1	ILMN_8431	C16ORF11	NM_145270.1	NM_145270.1		146325	21687187	NM_145270.1	C16orf11	NP_660313.1	ILMN_2185427	0001030170	S	2137	CCCTGGGGCCACACAGGGACACTGGAGGTCACAGTTATTTATTGATCACA	16	+	555450-555499	16p13.3f	Homo sapiens chromosome 16 open reading frame 11 (C16orf11), mRNA.					
Homo sapiens	RefSeq	XM_001721907.1	ILMN_343671	LOC100132957	XM_001721907.1	XM_001721907.1		100132957	169208396	XM_001721907.1	LOC100132957	XP_001721959.1	ILMN_3242615	0005490242	S	455	CCACGAGTGTCTTCTCGTTCCCAAGCCAGTGCAGGTTGGACAGCATCTCT	15	-	100112600-100112649	15q26.3d	PREDICTED: Homo sapiens hypothetical protein LOC100132957 (LOC100132957), mRNA.					
Homo sapiens	RefSeq	NM_198845.1	ILMN_138089	SIGLEC6	NM_198845.1	NM_198845.1		946	38504664	NM_198845.1	SIGLEC6	NP_942142.1	ILMN_1685630	0001410102	A	1999	CCAAGAGAACTGAGTTCAACTCCATCTATGCCAGCCTGGGCAACAGAGCG	19	-	56713435-56713455:56714596-56714624	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 6 (SIGLEC6), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9465907] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9465907] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9465907] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CD33L1; SIGLEC-6; OBBP1; CD33L	CD33L1; SIGLEC-6; OBBP1; CD33L
Homo sapiens	RefSeq	NM_080625.2	ILMN_28089	C20ORF160	NM_080625.2	NM_080625.2		140706	31542254	NM_080625.2	C20orf160	NP_542192.2	ILMN_1748206	0002900239	S	2339	GGATCTGGAGCCTCTATCTGGTTAGTGTCGTAACCTCTGTGTGCCTCCCG	20	+	30083460-30083509	20q11.21b	Homo sapiens chromosome 20 open reading frame 160 (C20orf160), mRNA.				dJ310O13.5; FLJ43600	dJ310O13.5; FLJ43600
Homo sapiens	RefSeq	XM_001721668.1	ILMN_352360	LOC100129794	XM_001721668.1	XM_001721668.1		100129794	169207192	XM_001721668.1	LOC100129794	XP_001721720.1	ILMN_3273144	0000380735	M	1235	CCCCGACCTAAACGGAATCAGAATCTCTGGGGATAGGGCCCAGAAACGAG				14q13.3b	PREDICTED: Homo sapiens similar to hCG1804255 (LOC100129794), mRNA.					
Homo sapiens	RefSeq	XM_001717382.1	ILMN_338797	LOC100133311	XM_001717382.1	XM_001717382.1		100133311	169170950	XM_001717382.1	LOC100133311	XP_001717434.1	ILMN_3280323	0002320044	M	285	ACGGCATCAGTGTAAGCAGTCGGTAAATGTGCAAATCTCTAGTTGCGCTT	7	+	27146595-27146644	7p15.2a	PREDICTED: Homo sapiens similar to hCG1644697 (LOC100133311), mRNA.					
Homo sapiens	RefSeq	XM_001717382.1	ILMN_338797	LOC100133311	XM_001717382.1	XM_001717382.1		100133311	169170950	XM_001717382.1	LOC100133311	XP_001717434.1	ILMN_3203821	0001400349	A	345	GAGGAGTTTCCCAATCGAGCTAGGATGGGAATTCCACCCACGCACCTATT	7	+	27146655-27146683:27157719-27157739	7p15.2a	PREDICTED: Homo sapiens similar to hCG1644697 (LOC100133311), mRNA.					
Homo sapiens	RefSeq	XM_937443.1	ILMN_41961	LOC653981	XM_937443.1	XM_937443.1		653981	88952940	XM_937443.1	LOC653981	XP_942536.1	ILMN_1790042	0004220139	S	13	TCCTCAGGGGGAAACTGTGAGCCAGTCATGTGCTCAGGGAATCAGACTTC					PREDICTED: Homo sapiens similar to olfactory receptor, family 2, subfamily T, member 34 (LOC653981), mRNA.					
Homo sapiens	RefSeq	XM_933614.1	ILMN_45350	LOC646434	XM_933614.2	XM_933614.2		646434	113421349	XM_933614.2	LOC646434	XP_938707.1	ILMN_1660227	0000510184	S	623	ACATTATGCTCCTACCTCCCGGCAGCATCTCCAGGCCCAGAACTTTCTCC	10	+	38776648-38776655:38776749-38776790	10p11.21a	PREDICTED: Homo sapiens hypothetical LOC646434 (LOC646434), mRNA.					
Homo sapiens	RefSeq	XM_935558.1	ILMN_307600	PMS2L2	NR_003614.1	NR_003614.1		5380	153791692	NR_003614.1	PMS2L2		ILMN_1676411	0001410064	S	289	AGATAGTAGGAAACAGTCTGGATGCTGGTGCCACTAATATTGATCTAAAG	7	-	74982894-74982902:74984790-74984830	7q11.23f	Homo sapiens postmeiotic segregation increased 2-like 2 pseudogene (PMS2L2), non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10101297] [evidence ND ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 10101297] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10101297] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	PMS4	
Homo sapiens	RefSeq	XM_940035.1	ILMN_45323	LOC126860	XM_929969.1	XM_929969.1		126860	88943605	XM_929969.1	LOC126860	XP_935062.1	ILMN_1701475	0004570180	A	234	GCACAGCTCCTGGGACAAGGTGAAAGAAACCTTTGGGGAGGGAGACAGAG	1	+	177824616-177824665	1q25.2c	PREDICTED: Homo sapiens similar to Centaurin-gamma 2 (ARF-GAP with GTP-binding protein-like, ankyrin repeat and pleckstrin homology domains 1) (AGAP-1) (GTP-binding and GTPase-activating protein 1) (GGAP1) (LOC126860), mRNA.					
Homo sapiens	RefSeq	NM_007255.1	ILMN_25071	B4GALT7	NM_007255.1	NM_007255.1		11285	6005951	NM_007255.1	B4GALT7	NP_009186.1	ILMN_1663541	0000520332	S	1426	AGCTGGCGTAGGTGGCAGTTGGGCCTGGTGAGGGTTAGGACTTCAGAAAC	5	+	176969704-176969753	5q35.3a	Homo sapiens xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) (B4GALT7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10506123] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10438455] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [pmid 10438455] [evidence IDA]; The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [pmid 16583246] [evidence IMP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10473568] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [pmid 16583246] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [pmid 16583246] [evidence IMP]	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 16583246] [evidence IMP]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 10506123] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: UDP-galactose + O-beta-D-xylosylprotein = UDP + 4-beta-D-galactosyl-O-beta-D-xylosylprotein [goid 46525] [pmid 10438455] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	B4GAL-T7; XGALT1; XGPT1; XGALT-1; beta4Gal-T7	B4GAL-T7; XGALT1; XGPT1; XGALT-1; beta4Gal-T7
Homo sapiens	RefSeq	NM_001012516.1	ILMN_27531	ITM2C	NM_001012516.1	NM_001012516.1		81618	60302913	NM_001012516.1	ITM2C	NP_001012534.1	ILMN_2366041	0002650762	A	1600	CGAGCCGTGGGTTCTGCTGAGTAGGTGGAGCTCATTGCTTTCTCCAAGCT	2	+	231451845-231451894	2q37.1a	Homo sapiens integral membrane protein 2C (ITM2C), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	E25; ITM3; BRI3; E25C; BRICD2C	ITM3; E25; BRI3; E25C; BRICD2C
Homo sapiens	RefSeq	NM_030926.4	ILMN_27531	ITM2C	NM_001012516.1	NM_001012516.1		81618	60302913	NM_001012516.1	ITM2C	NP_001012534.1	ILMN_1680453	0001110669	A	1665	AGATAACACAGAGGGAAAGGGAGAGCCACCTGGTACTTGTCCACCCTGCC	2	+	231451910-231451959	2q37.1a	Homo sapiens integral membrane protein 2C (ITM2C), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	E25; ITM3; BRI3; E25C; BRICD2C	ITM3; E25; BRI3; E25C; BRICD2C
Homo sapiens	RefSeq	XM_925800.1	ILMN_34517	LOC653052	XM_925800.2	XM_925800.2		653052	113418857	XM_925800.2	LOC653052	XP_930893.2	ILMN_1719828	0000830131	S	724	CGGTTGAGCACGGAGAGTGCCGATGACTATAACTTCGTCCGGGCCTACGA	7	-	139062525-139062574	7q34b	PREDICTED: Homo sapiens similar to Homeodomain-interacting protein kinase 2 (hHIPk2) (LOC653052), mRNA.					
Homo sapiens	RefSeq	NM_001042724.1	ILMN_170510	PVRL2	NM_001042724.1	NM_001042724.1		5819	112789531	NM_001042724.1	PVRL2	NP_001036189.1	ILMN_2255382	0006370022	I	1930	GATGCTCTGTCCTATAGCAGCCCCTCTGATTCCTACCAGGGCAAAGGCTT	19	+	45391559-45391608	19q13.32a	Homo sapiens poliovirus receptor-related 2 (herpesvirus entry mediator B) (PVRL2), transcript variant delta, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9657005] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 9657005] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]	PVRR2; HVEB; PRR2; CD112	PVRR2; HVEB; PRR2; CD112
Homo sapiens	RefSeq	NM_001042724.1	ILMN_170510	PVRL2	NM_001042724.1	NM_001042724.1		5819	112789531	NM_001042724.1	PVRL2	NP_001036189.1	ILMN_2337336	0002140746	A	1350	CAGTCTGTTCAATACCACCTTCGTCTGCACAGTCACCAATGCCGTGGGCA	19	+	45377653-45377702	19q13.32a	Homo sapiens poliovirus receptor-related 2 (herpesvirus entry mediator B) (PVRL2), transcript variant delta, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9657005] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 9657005] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]	PVRR2; HVEB; PRR2; CD112	PVRR2; HVEB; PRR2; CD112
Homo sapiens	RefSeq	NM_001040192.1	ILMN_167368	DNAJC28	NM_001040192.1	NM_001040192.1		54943	93352548	NM_001040192.1	DNAJC28	NP_001035282.1	ILMN_2253246	0002230014	I	34	TGCCCTGCCTGGGTCCTCCGGGGTAAAGTTCGTTTGGCGGAAGATTGTCC	21	-	34863940-34863989	21q22.11c	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 28 (DNAJC28), transcript variant 2, mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	C21orf78	C21orf78
Homo sapiens	RefSeq	NM_174939.2	ILMN_174308	LOC731102	XM_001128323.1	XM_001128323.1		731102	113422919	XM_001128323.1	LOC731102	XP_001128323.1	ILMN_1716298	0006250138	S	203	GCCCTCGGAAATCTCACTGTCGGAATCCTTGGAAATCACACCACGCACAA					PREDICTED: Homo sapiens similar to chromosome 11 open reading frame 64 (LOC731102), mRNA.					
Homo sapiens	RefSeq	NM_000929.1	ILMN_21379	PLA2G5	NM_000929.2	NM_000929.2		5322	113722111	NM_000929.2	PLA2G5	NP_000920.1	ILMN_1807171	0004480468	S	772	AGGCTCCTAAGTCACAGACCTCAGTCTTTCTCGAAGCTTGGCGGACCCCC	1	+	20289859-20289908	1p36.13a	Homo sapiens phospholipase A2, group V (PLA2G5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8300559] [evidence TAS]	The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [pmid 8300559] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate; requires Ca2+ [goid 47498] [pmid 8300559] [evidence TAS]	PLA2-10; GV-PLA2; hVPLA(2); DKFZp686C2294; MGC46205	DKFZp686C2294
Homo sapiens	RefSeq	XM_001130973.2	ILMN_170618	LOC729549	XM_001130973.2	XM_001130973.2		729549	169201954	XM_001130973.2	LOC729549	XP_001130973.2	ILMN_3298148	0004120661	M	797	ACTGGGACATTTTTGCTATGATTGCAGGCGTGGCCAGTGCCCCTGCACGG				10p12.1a	PREDICTED: Homo sapiens similar to hCG1793014 (LOC729549), mRNA.					
Homo sapiens	RefSeq	XM_940884.1	ILMN_40973	LOC651680	XM_940884.1	XM_940884.1		651680	89062091	XM_940884.1	LOC651680	XP_945977.1	ILMN_1796543	0001240139	S	24	CTCTTGTCAGCTCCTTCCTGCCCCTTCTTCATGCTCCTGCGACGGTGATC					PREDICTED: Homo sapiens similar to MEGF10 protein (LOC651680), mRNA.					
Homo sapiens	RefSeq	NM_005736.2	ILMN_13009	ACTR1A	NM_005736.2	NM_005736.2		10121	13325058	NM_005736.2	ACTR1A	NP_005727.1	ILMN_1792314	0004280561	S	2743	GCACAGCCTCGCACAAACCACATTGCCTGGTGGGGCCCAGTGTACTGAAA	10	-	104229006-104229055	10q24.32b	Homo sapiens ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) (ACTR1A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [pmid 7696711] [evidence TAS]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 1528266] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	ARP1	ARP1
Homo sapiens	RefSeq	NM_001743.3	ILMN_7659	CALM2	NM_001743.3	NM_001743.3		805	20428653	NM_001743.3	CALM2	NP_001734.1	ILMN_1687858	0007100711	S	857	GTTGTTGAAGTGTGGAGTTGTAACTCTGCGTGGACTATGGACAGTCAACA	2	-	47241030-47241079	2p21a	Homo sapiens calmodulin 2 (phosphorylase kinase, delta) (CALM2), mRNA.				PHKD; CAMII; PHKD2	PHKD; CAMII; PHKD2
Homo sapiens	RefSeq	NM_145739.1	ILMN_26015	OSBPL6	NM_032523.2	NM_032523.2		114880	22035610	NM_032523.2	OSBPL6	NP_115912.1	ILMN_1756935	0004590092	A	3555	CCACACGATTGTTCCACTGTCTGGAAGCACCATCCCCTATCGCAGGACTC	2	+	178968904-178968953	2q31.2b	Homo sapiens oxysterol binding protein-like 6 (OSBPL6), transcript variant 1, mRNA.		The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		ORP6; MGC59642; FLJ36583	ORP6; MGC59642; FLJ36583
Homo sapiens	RefSeq	NM_032523.2	ILMN_26015	OSBPL6	NM_032523.2	NM_032523.2		114880	22035610	NM_032523.2	OSBPL6	NP_115912.1	ILMN_1763561	0000460553	I	430	ACCCATAGAAGTGCCTCCTCTTCAACATCCTCCCAAAGGGACAGTAGGCA	2	+	178879209-178879258	2q31.2b	Homo sapiens oxysterol binding protein-like 6 (OSBPL6), transcript variant 1, mRNA.		The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		ORP6; MGC59642; FLJ36583	ORP6; MGC59642; FLJ36583
Homo sapiens	RefSeq	NM_018569.2	ILMN_24143	C4ORF16	NM_018569.2	NM_018569.2		55435	21361756	NM_018569.2	C4orf16	NP_061039.2	ILMN_2207562	0001450239	S	2354	CCTCTTGCAACAATGACGGTGCATGTTCTTATAAATATAGGAAGGTCCAG	4	+	113410192-113410241	4q25f	Homo sapiens chromosome 4 open reading frame 16 (C4orf16), mRNA.	Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]			GBAR; PRO0971	GBAR; PRO0971
Homo sapiens	RefSeq	NM_018569.2	ILMN_24143	C4ORF16	NM_018569.2	NM_018569.2		55435	21361756	NM_018569.2	C4orf16	NP_061039.2	ILMN_2207561	0003710753	S	1570	TCAGCCGATGTGAAGGAAGCATGAGGAGGGATCGTCAGACTCAGATTTAG	4	+	113409408-113409457	4q25f	Homo sapiens chromosome 4 open reading frame 16 (C4orf16), mRNA.	Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]			GBAR; PRO0971	GBAR; PRO0971
Homo sapiens	RefSeq	XM_936279.1	ILMN_32971	LOC642132	XM_936279.2	XM_936279.2		642132	113415111	XM_936279.2	LOC642132	XP_941372.2	ILMN_1791084	0004260743	S	5625	CATACCACCCTTTGGTGGGAGGAAACTAAAAATATAGCAAATGCAGAACC					PREDICTED: Homo sapiens similar to ROBO1 protein (LOC642132), mRNA.					
Homo sapiens	RefSeq	XM_001720750.1	ILMN_340204	LOC100129095	XM_001720750.1	XM_001720750.1		100129095	169216698	XM_001720750.1	LOC100129095	XP_001720802.1	ILMN_3259148	0005310452	M	1774	GGCCAGGCAGTGGGACTCCGGGAAAGCAAGCTGAAGTGTTTTGTGGGACA	X	+	144709326-144709375	Xq27.3c	PREDICTED: Homo sapiens similar to CXorf2 protein (LOC100129095), mRNA.					
Homo sapiens	RefSeq	XM_001727002.1	ILMN_338605	LOC100129503	XM_001727002.1	XM_001727002.1		100129503	169211960	XM_001727002.1	LOC100129503	XP_001727054.1	ILMN_3257178	0002000639	M	378	CCGCGGTTGAAGCGTGGGCTTGGGTTTTGGTTTTTCTTCTGTGGCAACAG				17q25.3f	PREDICTED: Homo sapiens hypothetical protein LOC100129503 (LOC100129503), mRNA.					
Homo sapiens	RefSeq	XM_943048.1	ILMN_33930	LOC647834	XM_943048.1	XM_943048.1		647834	89037157	XM_943048.1	LOC647834	XP_948141.1	ILMN_1693740	0007000341	S	2498	TAAGATCATGTCACTGCACTCCAGACTGAGCAACAGAGTGACACTTTATA					PREDICTED: Homo sapiens hypothetical protein LOC647834 (LOC647834), mRNA.					
Homo sapiens	RefSeq	NM_030581.3	ILMN_21808	WDR59	NM_030581.3	NM_030581.3		79726	58331265	NM_030581.3	WDR59	NP_085058.3	ILMN_1795428	0005290403	S	3388	CTCTTGATGCCAGTGCAGAGACCAGAGTCAGATGCCCGAGGACAGTGGGT	16	-	74907696-74907745	16q23.1a	Homo sapiens WD repeat domain 59 (WDR59), mRNA.				FLJ12270; MGC11230; FP977	FLJ12270; MGC11230; FP977
Homo sapiens	RefSeq	NM_004160.3	ILMN_2817	PYY	NM_004160.3	NM_004160.3		5697	71361685	NM_004160.3	PYY	NP_004151.2	ILMN_1703075	0006400309	S	859	ATCTGCCAACCACGCCCACGTCATTTGCATACGCACTCCCGACCCCAGAA	17	-	42030250-42030299	17q21.31b	Homo sapiens peptide YY (PYY), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7493937] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 10488139] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 7493937] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7592911] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7493937] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 7493937] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [pmid 10698177] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10488139] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 10698177] [evidence TAS]	PYY1	PYY1
Homo sapiens	Unigene	Hs.563667	ILMN_116471	HS.563667	Hs.563667		Hs.563667		23525414	BU678450			ILMN_1894969	0004120497	S	387	AAGCCAGTGTGTTGGAAAGGAGCGAGAAAGCAGGAAAGGGGCAAACCAGC	X	-	71168244-71168293		UI-CF-EC0-abi-h-07-0-UI.s1 UI-CF-EC0 Homo sapiens cDNA clone UI-CF-EC0-abi-h-07-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_170711.1	ILMN_8299	DAZAP1	NM_170711.1	NM_170711.1		26528	25470889	NM_170711.1	DAZAP1	NP_733829.1	ILMN_1746526	0004210373	I	1262	CGCCGGGCTGCGGCCCACACTTTGTTTACAGTCTTATGGTCAGGCTGAGC	19	+	1384762-1384811	19p13.3i-p13.3h	Homo sapiens DAZ associated protein 1 (DAZAP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10857750] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10857750] [evidence TAS]	MGC19907	MGC19907
Homo sapiens	RefSeq	NM_018959.2	ILMN_8299	DAZAP1	NM_170711.1	NM_170711.1		26528	25470889	NM_170711.1	DAZAP1	NP_733829.1	ILMN_1746257	0007100086	A	1927	TTAAAACGGGGTTTCCGTCGGCACTGGTGGAGGGGGTGCGCTGTTAGTCC	19	+	1386336-1386385	19p13.3i-p13.3h	Homo sapiens DAZ associated protein 1 (DAZAP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10857750] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10857750] [evidence TAS]	MGC19907	MGC19907
Homo sapiens	RefSeq	XM_943467.1	ILMN_139116	FGL1	XM_943467.1	XM_943467.1		2267	89028532	XM_943467.1	FGL1	XP_948560.1	ILMN_1731222	0005260241	I	536	TGTCTTATGAGCATAGTTGTAATGGAGTTGATGATATCTCACTGATAGAC				8p22b	PREDICTED: Homo sapiens fibrinogen-like 1, transcript variant 6 (FGL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A highly soluble, elongated protein complex found in blood plasma and involved in clot formation. It is converted into fibrin monomer by the action of thrombin. In the mouse, fibrinogen is a hexamer, 46 nm long and 9 nm maximal diameter, containing two sets of nonidentical chains (alpha, beta, and gamma) linked together by disulfide bonds [goid 5577] [pmid 8390249] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Homo sapiens	RefSeq	NM_017863.2	ILMN_6892	CXORF48	NM_017863.2	NM_017863.2		54967	40254909	NM_017863.2	CXorf48	NP_060333.1	ILMN_1683761	0004920288	I	1589	GCTTGCTAGTCACTGGAGGAAAGGAGTTCTTAATTAAAATGAACACGGCC	X	-	134290983-134291032	Xq26.3a	Homo sapiens chromosome X open reading frame 48 (CXorf48), transcript variant 2, mRNA.				FLJ20527; RP13-565O16.1	FLJ20527; RP13-565O16.1
Homo sapiens	Unigene	Hs.132457	ILMN_77331	HS.132457	Hs.132457		Hs.132457		28290372	BX119465			ILMN_1826046	0005130463	S	198	GGAGGAACTAGAGGGGTTGGCAAGTGATGAGTGTGACTTTGGACCACCTC	15	-	95616600-95616649		BX119465 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998P193909 ; IMAGE:1543554, mRNA sequence					
Homo sapiens	RefSeq	NM_152759.3	ILMN_969	LRRC43	NM_152759.3	NM_152759.3		254050	40255136	NM_152759.3	LRRC43	NP_689972.2	ILMN_2133125	0000610735	S	2143	CCGAAAGCCGTGATTCCGATCTACGAAGGCGATTACCACCCTGAGCCCCT	12	+	121253820-121253869	12q24.31c	Homo sapiens leucine rich repeat containing 43 (LRRC43), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC35140	MGC35140
Homo sapiens	RefSeq	XM_001724176.1	ILMN_337854	LOC100129426	XM_001724176.1	XM_001724176.1		100129426	169166205	XM_001724176.1	LOC100129426	XP_001724228.1	ILMN_3179844	0002000463	A	313	GGGCAAAACCTAAGCCTTAGAAGAAGAGATGCTGCCTTGTTGGAGGAGCT	4	+	110814710-110814729:110814730-110814759	4q25c	PREDICTED: Homo sapiens similar to HIG1 domain family, member 1A (LOC100129426), mRNA.					
Homo sapiens	RefSeq	XM_929284.1	ILMN_45078	LOC651530	XM_940704.1	XM_940704.1		651530	89031851	XM_940704.1	LOC651530	XP_945797.1	ILMN_1661043	0005310356	S	61	GGGAACGGACACTCAGTGCCACCGCGGAGGCTGCACGGTGCCCAGCGCCA					PREDICTED: Homo sapiens similar to proline-rich protein BstNI subfamily 3 precursor (LOC651530), mRNA.					
Homo sapiens	RefSeq	NM_144966.3	ILMN_30224	FREM1	NM_144966.4	NM_144966.4		158326	122056682	NM_144966.4	FREM1	NP_659403.4	ILMN_1715452	0001940358	S	6955	GCCACTGGGAGTGGATCGGTGGTGAACCTGTTGCCTTCACCAATGGGAGA	9	-	14806748-14806797	9p22.3c	Homo sapiens FRAS1 related extracellular matrix 1 (FREM1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	C9orf145; FLJ25461; C9orf143; C9orf154; QBRICK; RP11-439N12.3	FLJ25461; C9orf154; QBRICK; RP11-439N12.3
Homo sapiens	RefSeq	NM_001206.2	ILMN_169601	KLF9	NM_001206.2	NM_001206.2		687	59853224	NM_001206.2	KLF9	NP_001197.1	ILMN_1778523	0003390292	S	4834	GCCCTTCACCATTGTGGAATGATGCCCTGGCTTTAAGGTTTAGCTCCACA	9	-	72999837-72999886	9q21.11c	Homo sapiens Kruppel-like factor 9 (KLF9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1356762] [evidence TAS]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IEA]; Any series of molecular signals generated as a consequence of a progesterone binding to its receptor [goid 50847] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8051167] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1356762] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BTEB; BTEB1	BTEB; BTEB1
Homo sapiens	RefSeq	NM_001012421.1	ILMN_29242	ANKRD20A1	NM_032250.2	NM_032250.2		84210	142385243	NM_032250.2	ANKRD20A1	NP_115626.1	ILMN_1747839	0004290364	S	203	GACTCCGAACTGCAGAAGATCCACAGGGCAGCTGTCAAAGGCGACGCCGC				9q12h	Homo sapiens ankyrin repeat domain 20 family, member A1 (ANKRD20A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]			DKFZp434A171; ANKRD20A	
Homo sapiens	RefSeq	XM_497035.2	ILMN_29242	ANKRD20A1	NM_032250.2	NM_032250.2		84210	142385243	NM_032250.2	ANKRD20A1	NP_115626.1	ILMN_1679184	0004490484	S	206	TCCGAACTGCAGAAGATCCACAGGGCAGCTGTCAAAGGCGACGCCGCGGA				9q12h	Homo sapiens ankyrin repeat domain 20 family, member A1 (ANKRD20A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]			DKFZp434A171; ANKRD20A	
Homo sapiens	RefSeq	NM_001012419.1	ILMN_29242	ANKRD20A1	NM_032250.2	NM_032250.2		84210	142385243	NM_032250.2	ANKRD20A1	NP_115626.1	ILMN_1670452	0007050114	S	413	AGAACGCCTTTGATACAGGCTGTCCATTGCCAGGAAGAGGCTTGTGCCGT				9q12h	Homo sapiens ankyrin repeat domain 20 family, member A1 (ANKRD20A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]			DKFZp434A171; ANKRD20A	
Homo sapiens	RefSeq	NM_198151.1	ILMN_1501	HEPACAM2	NM_198151.1	NM_198151.1		253012	37700248	NM_198151.1	HEPACAM2	NP_937794.1	ILMN_2283772	0004560619	I	29	AGGTTCTCTCTGCATTTGCCCCTTTAGATTGTGAAATGTGGCTCAAGGTC	7	-	92848792-92848807:92848808-92848841	7q21.3a	Homo sapiens HEPACAM family member 2 (HEPACAM2), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_198151.1	ILMN_1501	HEPACAM2	NM_198151.1	NM_198151.1		253012	37700248	NM_198151.1	HEPACAM2	NP_937794.1	ILMN_2388263	0001300427	A	1658	CGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATAAG	7	-	92818288-92818337	7q21.3a	Homo sapiens HEPACAM family member 2 (HEPACAM2), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_198151.1	ILMN_1501	HEPACAM2	NM_198151.1	NM_198151.1		253012	37700248	NM_198151.1	HEPACAM2	NP_937794.1	ILMN_1804593	0004290465	S	1379	AGCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGAACTTTCATGGGC	7	-	92818567-92818579:92818580-92818583:92821567-92821599	7q21.3a	Homo sapiens HEPACAM family member 2 (HEPACAM2), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	XM_939059.1	ILMN_308835	TMEM213	NM_001085429.1	NM_001085429.1		155006	146229351	NM_001085429.1	TMEM213	NP_001078898.1	ILMN_1739126	0002710026	A	2172	CACATCACTGTGAAACCTTGCAGAGGAGGAGAGGGCAGGTTCATCAGAAG	7	+	138140091-138140140	7q34a	Homo sapiens transmembrane protein 213 (TMEM213), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_145246.3	ILMN_549	C10ORF4	NM_145246.3	NM_145246.3		118924	50409631	NM_145246.3	C10orf4	NP_660289.2	ILMN_1765480	0003310152	A	1933	CACAGGGAGCCAGTGAGGTCCCAGTAGTCTAAAACAGTTCATGTGTTCAC	10	-	95431253-95431302	10q23.33b	Homo sapiens chromosome 10 open reading frame 4 (C10orf4), mRNA.				FRA10AC1; FRA10A; F26C11.1-like	FRA10AC1; FRA10A; F26C11.1-like
Homo sapiens	RefSeq	NM_012436.2	ILMN_19303	SPAG8	NM_012436.2	NM_012436.2		26206	27502371	NM_012436.2	SPAG8	NP_036568.1	ILMN_1676907	0007550014	I	1837	GAGTCACTGTGTGCATACCCCATAACCTTTCCTTGGGATTGCCCCTATCC	9	-	35799735-35799784	9p13.3a	Homo sapiens sperm associated antigen 8 (SPAG8), transcript variant 1, mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8788182] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HSD-1; BS-84; SMP1; SPAG3; hSMP-1; MGC26201	HSD-1; BS-84; SMP1; SPAG3; hSMP-1; MGC26201
Homo sapiens	RefSeq	NR_003228.1	ILMN_166820	AFG3L1	NR_003228.1	NR_003228.1		172	115430062	NR_003228.1	AFG3L1		ILMN_2295698	0005670274	I	1677	CTCGGAGAAGTCTACCTATGAGGAGTTTGTAGAGGGCGTGGGCAGCCTGG	16	+	88594432-88594481	16q24.3b	Homo sapiens AFG3 ATPase family gene 3-like 1 (S. cerevisiae) (AFG3L1), transcript variant 3, non-coding RNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ45200; AFG3	FLJ45200; AFG3
Homo sapiens	RefSeq	NR_003228.1	ILMN_166820	AFG3L1	NR_003228.1	NR_003228.1		172	115430062	NR_003228.1	AFG3L1		ILMN_2409898	0003180403	A	1144	ACAAGAGCCTCAATAAGGACACCCTGGCGAGGAAGCTGGCAGTGCTCACC	16	+	88587740-88587789	16q24.3b	Homo sapiens AFG3 ATPase family gene 3-like 1 (S. cerevisiae) (AFG3L1), transcript variant 3, non-coding RNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ45200; AFG3	FLJ45200; AFG3
Homo sapiens	RefSeq	NR_002168.1	ILMN_13501	PPP1R2P3	NR_002168.1	NR_002168.1		153743	52353309	NR_002168.1	PPP1R2P3		ILMN_2045610	0005700328	S	1518	CGACATTAGGAACTCTTTCTGTCACTCTTCTGTCATTTGCTGCTGTGTGG	5	+	156211644-156211693	5q33.3a	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 3 (PPP1R2P3), non-coding RNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	MGC87149	MGC87149
Homo sapiens	RefSeq	NM_015308.1	ILMN_25895	FNBP4	NM_015308.1	NM_015308.1		23360	24308032	NM_015308.1	FNBP4	NP_056123.1	ILMN_2108938	0007650091	S	3599	CTAGAACTGGTAGCTCGGTCGTTTCGCACACTAGGTGGCATACAGGCAGC	11	-	47694982-47695031	11p11.2b-p11.2a	Homo sapiens formin binding protein 4 (FNBP4), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FBP30; KIAA1014; DKFZp779I1064; FLJ41904	FBP30; KIAA1014; DKFZp779I1064; FLJ41904
Homo sapiens	RefSeq	XR_001010.1	ILMN_38308	C21ORF74	XR_001010.1	XR_001010.1		54143	89058158	XR_001010.1	C21orf74		ILMN_1716149	0003310600	A	500	TGTCCAATGCTGGTTTCCACCTTGTGCCCTGAGCTGTTGGGAGAGGCTCC	21	+	22410613-22410662		PREDICTED: Homo sapiens chromosome 21 open reading frame 74 (C21orf74), misc RNA.					
Homo sapiens	RefSeq	XM_935565.1	ILMN_34588	LOC641806	XM_935565.1	XM_935565.1		641806	89027545	XM_935565.1	LOC641806	XP_940658.1	ILMN_1681300	0007330626	S	1064	CACAGCCCCTCTATGGTTTAGATGACAGTGCTGCAAAGGAGGCAACAGAG					PREDICTED: Homo sapiens similar to Serine/threonine-protein kinase tousled-like 2 (Tousled-like kinase 2) (PKU-alpha) (LOC641806), mRNA.					
Homo sapiens	RefSeq	XM_932316.1	ILMN_43307	LOC644701	XM_932316.1	XM_932316.1		644701	89038297	XM_932316.1	LOC644701	XP_937409.1	ILMN_1675687	0004830288	S	209	GGGTGGAGCGCAGCGGGGTCCGGCCAGGAAGGAGTCGGCGGGCGGAGAAC	15	-	36332292-36332341	15q14d	PREDICTED: Homo sapiens hypothetical protein LOC644701 (LOC644701), mRNA.					
Homo sapiens	RefSeq	NM_001025190.1	ILMN_946	MSLNL	NM_001025190.1	NM_001025190.1		401827	68448527	NM_001025190.1	MSLNL	NP_001020361.1	ILMN_3242830	0000160524	S	3059	ACAGCGTTGCCTCAGGGTGGCTGGGTTCACAGGGGTCAGGTGCAGGAAAA	16	-	819481-819530	16p13.3f	Homo sapiens mesothelin-like (MSLNL), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_001025190.1	ILMN_946	MSLNL	NM_001025190.1	NM_001025190.1		401827	68448527	NM_001025190.1	MSLNL	NP_001020361.1	ILMN_1658207	0001770189	S	3064	GTTGCCTCAGGGTGGCTGGGTTCACAGGGGTCAGGTGCAGGAAAAACAGA	16	-	819476-819525	16p13.3f	Homo sapiens mesothelin-like (MSLNL), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XR_038455.1	ILMN_347504	LOC100130291	XR_038455.1	XR_038455.1		100130291	169204397	XR_038455.1	LOC100130291		ILMN_3267438	0005220364	M	278	AGCAGAACTCTGAACAACGTGCCTCAGGAGTGCAAGTTGCTGATGAAGTG	12	+	6864307-6864356	12p13.31d	PREDICTED: Homo sapiens misc_RNA (LOC100130291), miscRNA.					
Homo sapiens	RefSeq	XR_038455.1	ILMN_347504	LOC100130291	XR_038455.1	XR_038455.1		100130291	169204397	XR_038455.1	LOC100130291		ILMN_3190972	0002760100	A	769	GGATGCCCTGTGTAGATCATCATTCAGTGCCACAAATTGAAAGCTTCCAC	12	+	6865100-6865149	12p13.31d	PREDICTED: Homo sapiens misc_RNA (LOC100130291), miscRNA.					
Homo sapiens	Unigene	Hs.542905	ILMN_106604	HS.542905	Hs.542905		Hs.542905		2054152	AA400272			ILMN_1908463	0003180519	S	162	GGGTGAGTCAATAGGTGTCAGGTATCAGCATGTTGGTGGCAGAATCCAGG	3	+	157831095-157831144		zu63c05.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:742664 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005620.1	ILMN_15522	S100A11	NM_005620.1	NM_005620.1		6282	5032056	NM_005620.1	S100A11	NP_005611.1	ILMN_1750101	0000110682	S	489	CTGTCATCATCTCCACAGCCCACCCATCCCCTGAGCACACTAACCACCTC	1	-	152005037-152005086	1q21.3a	Homo sapiens S100 calcium binding protein A11 (S100A11), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 10913138] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10913138] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10913138] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 10851017] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10851017] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10913138] [evidence IDA]; Interacting selectively with S100 beta protein. S100 is a small calcium and zinc binding protein produced in astrocytes that is implicated in Alzheimer's disease, Down Syndrome and ALS [goid 48154] [pmid 10913138] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 10913138] [evidence IDA]	S100C; MLN70	S100C; MLN70
Homo sapiens	RefSeq	NM_004918.2	ILMN_30300	TCL1B	NM_004918.2	NM_004918.2		9623	40548373	NM_004918.2	TCL1B	NP_004909.1	ILMN_2382309	0000770255	A	1011	CACAGTGGGGAGCATGGAGGGATGGGTTTGGCCTGTGCTTCTGCTTATTC	14	+	95228587-95228636	14q32.13b	Homo sapiens T-cell leukemia/lymphoma 1B (TCL1B), transcript variant 1, mRNA.				TML1	TML1
Homo sapiens	RefSeq	NM_173817.1	ILMN_23601	C18ORF58	NM_173817.1	NM_173817.1		284222	61676086	NM_173817.1	C18orf58	NP_776178.1	ILMN_1784905	0004610397	S	1439	GGCTGACCTTCGTGCTGCTGATCTGGTCGTGCACTCTTTGGATGATTCGC	18	-	10784925-10784969:10784970-10784974	18p11.22a	Homo sapiens chromosome 18 open reading frame 58 (C18orf58), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ34907	FLJ34907
Homo sapiens	RefSeq	NM_017715.1	ILMN_25682	ZNF3	NM_032924.3	NM_032924.3		7551	122114640	NM_032924.3	ZNF3	NP_116313.3	ILMN_1786215	0001170154	A	1243	CGCCTGCAATGAATGTGGGAAGGCCTTCAGCAGGAGCTCAACCCTTATTC	7	-	99669121-99669170	7q22.1b	Homo sapiens zinc finger protein 3 (ZNF3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2288909] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor [goid 45321] [pmid 2288909] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2288909] [evidence NAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18255255] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HF.12; KOX25; PP838; Zfp113; FLJ20216; A8-51	HF.12; KOX25; PP838; Zfp113; FLJ20216; A8-51
Homo sapiens	RefSeq	NM_032924.2	ILMN_25682	ZNF3	NM_032924.3	NM_032924.3		7551	122114640	NM_032924.3	ZNF3	NP_116313.3	ILMN_1778560	0003290152	I	2345	AGCTAGTAACCGGCTGTGAGGGAGAGGGTCAGAAGCACTTAGCGTTGGCC	7	-	99668019-99668068	7q22.1b	Homo sapiens zinc finger protein 3 (ZNF3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2288909] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor [goid 45321] [pmid 2288909] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2288909] [evidence NAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18255255] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HF.12; KOX25; PP838; Zfp113; FLJ20216; A8-51	HF.12; KOX25; PP838; Zfp113; FLJ20216; A8-51
Homo sapiens	RefSeq	NM_014666.2	ILMN_12809	CLINT1	NM_014666.2	NM_014666.2		9685	37537713	NM_014666.2	CLINT1	NP_055481.1	ILMN_1745076	0007040280	S	2862	TGGCAAGGCTTCCTTCCGTGTTTATCCCTGTAGCCATCATTTAAGTCAGG	5	-	157214041-157214090	5q33.3b	Homo sapiens clathrin interactor 1 (CLINT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10942595] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14675752] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	KIAA0171; EPSINR; CLINT; ENTH; EPNR; EPN4	KIAA0171; EPSINR; CLINT; ENTH; EPNR; EPN4
Homo sapiens	RefSeq	NM_003708.2	ILMN_18171	RDH16	NM_003708.3	NM_003708.3		8608	150247225	NM_003708.3	RDH16	NP_003699.3	ILMN_1810000	0004200041	S	1558	AGGGCACCCCTCCTCTGAAGATCCCTGTACACGTGGTGTTGGGACTGGAA	12	-	57345331-57345380	12q13.3a	Homo sapiens retinol dehydrogenase 16 (all-trans) (RDH16), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 9677409] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9677409] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [pmid 9677409] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9677409] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	RODH-4	RODH-4
Homo sapiens	RefSeq	NM_153042.2	ILMN_25272	KDM1B	NM_153042.3	NM_153042.3		221656	116256450	NM_153042.3	KDM1B	NP_694587.3	ILMN_1781537	0004220112	S	3305	AACACACCAAGAATGTGCAGTGAACCTCAGGCATTTAAGACACCTCCCCC	6	+	18223514-18223563	6p22.3d	Homo sapiens lysine (K)-specific demethylase 1B (KDM1B), mRNA.				dJ298J15.2; FLJ34109; FLJ43328; C6orf193; DKFZp686I0412; bA204B7.3; FLJ33898	dJ298J15.2; FLJ34109; C6orf193; DKFZp686I0412; FLJ33898
Homo sapiens	RefSeq	XM_942425.1	ILMN_41537	LOC652777	XM_942425.1	XM_942425.1		652777	89064337	XM_942425.1	LOC652777	XP_947518.1	ILMN_1801193	0006980168	S	1	ATGCAACTCCCATCCCTCTTCATTCCCGCCCAGTGGGACTGTGTGAACCC					PREDICTED: Homo sapiens similar to Copine-7 (Copine VII) (LOC652777), mRNA.					
Homo sapiens	RefSeq	NM_001136499.1	ILMN_369938	ZNF841	NM_001136499.1	NM_001136499.1		284371	211057415	NM_001136499.1	ZNF841	NP_001129971.1	ILMN_3235593	0004900300	S	3781	CCTTCCTCAGGTTTCCCGAGAGGGTGAACAGACGTCAGCGCCATGTTTCC	19	-	52567764-52567813	19q13.33e	Homo sapiens zinc finger protein 841 (ZNF841), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	Unigene	Hs.196849	ILMN_81417	HS.196849	Hs.196849		Hs.196849		4762274	AI658704			ILMN_1826226	0001740019	S	265	CCACACGCGCCGGTTTTCCGAGCCCGGTTTTCTTCAGGAGCGAAGCTGTT	7	+	27245638-27245687		tu22e12.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:2251822 3, mRNA sequence					
Homo sapiens	RefSeq	XM_942270.1	ILMN_34211	LOC652679	XM_942270.1	XM_942270.1		652679	89063671	XM_942270.1	LOC652679	XP_947363.1	ILMN_1702983	0002230373	S	828	CTCTGGGCAGGGCTGCGAACTAGAAATAATCAGCCGCTTTGGGTGGGAGA					PREDICTED: Homo sapiens hypothetical protein LOC652679 (LOC652679), mRNA.					
Homo sapiens	RefSeq	NM_014686.2	ILMN_16416	KIAA0355	NM_014686.3	NM_014686.3		9710	148839357	NM_014686.3	KIAA0355	NP_055501.2	ILMN_1659845	0007570195	S	6380	GACTGTGTGAAGCCGTTTGTGTGGTCTCCATGTAGGTGCTGTGTTCCCGG	19	+	34846168-34846217	19q13.11c	Homo sapiens KIAA0355 (KIAA0355), mRNA.					
Homo sapiens	RefSeq	NM_138574.1	ILMN_24141	HDGFL1	NM_138574.1	NM_138574.1		154150	20070381	NM_138574.1	HDGFL1	NP_612641.1	ILMN_1779673	0005890543	S	1661	GCCTCCACGCTGGCCCTAGCTTTCCCATTGCTGTTCCATTGCTGAGACAA	6	+	22679498-22679547	6p22.3a	Homo sapiens hepatoma derived growth factor-like 1 (HDGFL1), mRNA.				dJ309H15.1; PWWP1	dJ309H15.1; PWWP1
Homo sapiens	RefSeq	XM_943994.1	ILMN_35264	LOC649967	XM_943994.1	XM_943994.1		649967	88981284	XM_943994.1	LOC649967	XP_949087.1	ILMN_1805464	0003800433	S	99	GGCTGGAGAAAACAGAGGTCCTGCTGGTCATTGAGAGAAAAGGTGTGCAC					PREDICTED: Homo sapiens hypothetical protein LOC649967 (LOC649967), mRNA.					
Homo sapiens	RefSeq	NM_018566.3	ILMN_19081	YOD1	NM_018566.3	NM_018566.3		55432	62751963	NM_018566.3	YOD1	NP_061036.3	ILMN_1678919	0004590020	S	5728	CAGTTTTCCAGTCACATTGGTGCCATTCAGGACTCCAGCTGTTTACAGGA	1	-	207217681-207217730	1q32.1h	Homo sapiens YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae) (YOD1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents, and compounds derived from amino acids, as carried out by individual cells [goid 6519] [evidence ISS]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: X-CoA + H2O = X + CoA; X may be any group [goid 16289] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PRO0907; RP11-164O23.1; OTUD2; DKFZp451J1719	PRO0907; RP11-164O23.1; OTUD2; DKFZp451J1719
Homo sapiens	RefSeq	NM_006103.3	ILMN_27162	WFDC2	NM_006103.3	NM_006103.3		10406	56699494	NM_006103.3	WFDC2	NP_006094.3	ILMN_3307693	0004890564	S	275	GTGAACATTAACTTTCCCCAGCTCGGCCTCTGTCGGGACCAGTGCCAGGT	20	+	43542019-43542068	20q13.12b	Homo sapiens WAP four-disulfide core domain 2 (WFDC2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1686187] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1686187] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 1686187] [evidence TAS]	Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	dJ461P17.6; WAP5; MGC57529; HE4	dJ461P17.6; WAP5; MGC57529; HE4
Homo sapiens	RefSeq	XM_935493.1	ILMN_32718	LOC402509	XM_935781.2	XM_935781.2		402509	113419556	XM_935781.2	LOC402509	XP_940874.2	ILMN_1727049	0001570167	A	2278	CCCTGTTTCACCCCTGCTGTGTCCCGTCACCCGTCTGTCCACTAACTGTA				7p11.2a	PREDICTED: Homo sapiens similar to solute carrier family 29 (nucleoside transporters), member 4 (LOC402509), mRNA.					
Homo sapiens	RefSeq	NM_018107.3	ILMN_1566	RBM23	NM_018107.4	NM_018107.4		55147	116734693	NM_018107.4	RBM23	NP_060577.3	ILMN_1780756	0002190743	S	2250	GGATGGAGGGAGGCTGCTACTCTACCACTTCCTGTGTGCCTCTACTGTGG	14	-	23370110-23370159	14q11.2f	Homo sapiens RNA binding motif protein 23 (RBM23), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC4458; PP239; RNPC4; CAPERbeta; FLJ10482	RNPC4; FLJ10482
Homo sapiens	RefSeq	NM_031284.3	ILMN_16425	ADPGK	NM_031284.3	NM_031284.3		83440	31542508	NM_031284.3	ADPGK	NP_112574.3	ILMN_1793959	0005550619	S	2111	CTGCAGTTGTCTGGAAGCCTGGGTGGCGTCATGAGCTGAAGGATCATGCT	15	-	70831094-70831143	15q24.1a	Homo sapiens ADP-dependent glucokinase (ADPGK), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ADP + D-glucose = AMP + D-glucose 6-phosphate [goid 43843] [evidence IEA]	ADP-GK; DKFZP434B195; 2610017G09Rik	ADP-GK; DKFZP434B195; 2610017G09Rik
Homo sapiens	RefSeq	XM_927499.1	ILMN_44408	LOC644336	XM_927499.1	XM_927499.1		644336	89029948	XM_927499.1	LOC644336	XP_932592.1	ILMN_1767846	0001710017	S	101	ACAAGGAAGACGAGAGCCTTGAAGATGAGGAGTGTAGTGGCTGCCATTGG	9	+	104922151-104922200		PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC644336), mRNA.					
Homo sapiens	RefSeq	NM_021111.1	ILMN_23308	RECK	NM_021111.1	NM_021111.1		8434	11863155	NM_021111.1	RECK	NP_066934.1	ILMN_1688630	0004060619	S	3649	GCAACAGGCTCACTGGTCACGGATTTGTGTCTGTGACTTTTGTGAAAGGG	9	+	36113685-36113734	9p13.3a	Homo sapiens reversion-inducing-cysteine-rich protein with kazal motifs (RECK), mRNA.	Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [pmid 9789069] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9789069] [evidence IPI]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [pmid 9789069] [evidence TAS]	ST15; hRECK	ST15; hRECK
Homo sapiens	RefSeq	NM_021111.1	ILMN_23308	RECK	NM_021111.1	NM_021111.1		8434	11863155	NM_021111.1	RECK	NP_066934.1	ILMN_2067269	0003390487	S	4291	AAGCTTTCAGAATATGTCAGTGCTGATGTAGCATGCTTGTTGCAATTGCC	9	+	36114327-36114376	9p13.3a	Homo sapiens reversion-inducing-cysteine-rich protein with kazal motifs (RECK), mRNA.	Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [pmid 9789069] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state [goid 1955] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9789069] [evidence IPI]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [pmid 9789069] [evidence TAS]	ST15; hRECK	ST15; hRECK
Homo sapiens	RefSeq	NM_021709.2	ILMN_6846	SIVA1	NM_021709.2	NM_021709.2		10572	119393887	NM_021709.2	SIVA1	NP_068355.1	ILMN_3300972	0001450477	M	192	ATCTGGGGTAGCGTCCATTGCCTGTTCCTCATGCGTGCGAGCCGTGGATG	14	+	104293990-104294039	14q32.33b	Homo sapiens SIVA1, apoptosis-inducing factor (SIVA1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15034012] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14739602] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12011449] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12011449] [evidence IDA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 15034012] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9177220] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12011449] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 15034012] [evidence IDA]; The process of apoptosis in activated T cells [goid 6924] [pmid 16491128] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [pmid 15034012] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [pmid 14739602] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [pmid 16491128] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with a virus component to initiate a change in cell activity [goid 1618] [evidence ISS]; Interacting selectively with a CD27, a receptor found on the surface of T cells and some B cells and NK cells [goid 5175] [pmid 16683188] [evidence IPI]; Interacting selectively with a CD27, a receptor found on the surface of T cells and some B cells and NK cells [goid 5175] [pmid 9177220] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14739602] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12011449] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14739602] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9177220] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16683188] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14739602] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12011449] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 16683188] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [pmid 15034012] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SIVA; CD27BP; Siva-2; Siva-1	CD27BP
Homo sapiens	RefSeq	NM_033417.1	ILMN_2341	HAUS8	NM_033417.1	NM_033417.1		93323	58761503	NM_033417.1	HAUS8	NP_219485.1	ILMN_2365528	0002970754	A	1068	CGCAGAGGCAAGCAAAGAGGCAGCCTTGGCAAACCAGGAAGTCTGGGAAG	19	-	17160909-17160958	19p13.11e	Homo sapiens HAUS augmin-like complex, subunit 8 (HAUS8), transcript variant 1, mRNA.				MGC20533	MGC20533
Homo sapiens	RefSeq	NM_033417.1	ILMN_2341	HAUS8	NM_033417.1	NM_033417.1		93323	58761503	NM_033417.1	HAUS8	NP_219485.1	ILMN_3176989	0000650307	A	1129	ATGGCGCCCCCCAGCCGGTGGTATTTCAATCAAGACAGTGCCTGCAGAGA	19	-	17160848-17160897	19p13.11e	Homo sapiens HAUS augmin-like complex, subunit 8 (HAUS8), transcript variant 1, mRNA.				MGC20533	MGC20533
Homo sapiens	RefSeq	NM_001011699.1	ILMN_2341	HAUS8	NM_033417.1	NM_033417.1		93323	58761503	NM_033417.1	HAUS8	NP_219485.1	ILMN_1768020	0006280674	A	1232	CCTCGTCAGCCCCCGCTCAGGCCACGTTCATCAGCCCAAGCGAAGATTTT	19	-	17160745-17160794	19p13.11e	Homo sapiens HAUS augmin-like complex, subunit 8 (HAUS8), transcript variant 1, mRNA.				MGC20533	MGC20533
Homo sapiens	RefSeq	NM_054022.2	ILMN_182619	GOSR2	NM_004287.3	NM_004287.3		9570	60499005	NM_004287.3	GOSR2	NP_004278.2	ILMN_1656293	0002600288	A	459	CCCTCCAGAAAGTTCACAACGGCATGGATGACCTCATTTTAGATGGGCAC	17	+	42367443-42367492	17q21.32a	Homo sapiens golgi SNAP receptor complex member 2 (GOSR2), transcript variant A, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 9349823] [evidence TAS]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 9349823] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9349823] [evidence TAS]	GS27; MEMBRIN; Bos1	GS27; MEMBRIN; Bos1
Homo sapiens	RefSeq	NM_004287.3	ILMN_182619	GOSR2	NM_004287.3	NM_004287.3		9570	60499005	NM_004287.3	GOSR2	NP_004278.2	ILMN_1722812	0003850747	I	2418	GCTGCGGTGCCAGGGACCTAGCGCAGGACTTTTGGTAATCCATAAAATGG	17	+	42372831-42372880	17q21.32a	Homo sapiens golgi SNAP receptor complex member 2 (GOSR2), transcript variant A, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 9349823] [evidence TAS]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 9349823] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9349823] [evidence TAS]	GS27; MEMBRIN; Bos1	GS27; MEMBRIN; Bos1
Homo sapiens	Unigene	Hs.47453	ILMN_72809	HS.47453	Hs.47453		Hs.47453		1195329	N54163			ILMN_1833504	0006650768	S	392	AATGCCACTAAGAAAAGGGGAAACATCACAGCTACACCTTCAAACACCAG	5	+	157090639-157090688		yv64a12.s1 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGE:247486 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014787.2	ILMN_173487	DNAJC6	NM_014787.2	NM_014787.2		9829	55750030	NM_014787.2	DNAJC6	NP_055602.1	ILMN_2166543	0001940102	S	5472	AAACGAATCTGTATGTTGAGGCAAAAGGATTGAACCTGGAAGTCTGGGAC	1	+	65653862-65653911	1p31.3b	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6 (DNAJC6), mRNA.			Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	KIAA0473; MGC129914; DJC6; MGC129915; MGC48436	KIAA0473; MGC129914; DJC6; MGC129915; MGC48436
Homo sapiens	RefSeq	NM_145792.1	ILMN_29173	MGST1	NM_145792.1	NM_145792.1		4257	22035637	NM_145792.1	MGST1	NP_665735.1	ILMN_2355168	0005080131	A	399	GGAGCACGGATCTACCACACCATTGCATATTTGACACCCCTTCCCCAGCC	12	+	16408108-16408157	12p12.3d	Homo sapiens microsomal glutathione S-transferase 1 (MGST1), transcript variant 1a, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 3372534] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GST12; MGST-I; MGC14525; MGST	GST12; MGST-I; MGC14525; MGST
Homo sapiens	RefSeq	NM_152431.1	ILMN_14855	PIWIL4	NM_152431.1	NM_152431.1		143689	22748904	NM_152431.1	PIWIL4	NP_689644.1	ILMN_1769606	0004540333	S	2583	ACAACTGGCCGGGCATAGTCAGTGTCCCAGCACCATGTCAGTATGCTCAC	11	+	93992948-93992958:93993690-93993728	11q21b	Homo sapiens piwi-like 4 (Drosophila) (PIWIL4), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ36156; DKFZp686P01248; HIWI2	FLJ36156; DKFZp686P01248; HIWI2
Homo sapiens	RefSeq	NM_152431.1	ILMN_14855	PIWIL4	NM_152431.1	NM_152431.1		143689	22748904	NM_152431.1	PIWIL4	NP_689644.1	ILMN_2147078	0006400184	S	2768	GTGCAAATCTGCCATAAGCTCAAGGCTGTGACTGGGGAAAAAGATTGAGC	11	+	93993864-93993913	11q21b	Homo sapiens piwi-like 4 (Drosophila) (PIWIL4), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ36156; DKFZp686P01248; HIWI2	FLJ36156; DKFZp686P01248; HIWI2
Homo sapiens	RefSeq	NM_022658.3	ILMN_181002	HOXC8	NM_022658.3	NM_022658.3		3224	45580721	NM_022658.3	HOXC8	NP_073149.1	ILMN_1718285	0004640059	S	1986	CACTAAGAAAACCCAACAACTGAGACTGCCTAGCCCGCCGGTCCTGTGCG	12	+	52692510-52692559	12q13.13f	Homo sapiens homeobox C8 (HOXC8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX3; HOX3A	HOX3; HOX3A
Homo sapiens	RefSeq	XR_001447.1	ILMN_162341	LOC727737	XM_001126088.1	XM_001126088.1		727737	113413576	XM_001126088.1	LOC727737	XP_001126088.1	ILMN_1714050	0002900195	S	1460	GAGAGCTGCCAAGTCCAGGTGGGGTCCCTCGGAGATTCTTCTGATGTAGA	2	+	88619-88652:89402-89417		PREDICTED: Homo sapiens similar to APG4 autophagy 4 homolog B isoform a (LOC727737), mRNA.					
Homo sapiens	RefSeq	NM_001001390.1	ILMN_10947	CD44	NM_001001391.1	NM_001001391.1		960	48255940	NM_001001391.1	CD44	NP_001001391.1	ILMN_1803429	0005860152	A	4419	TGACCACTGTTATTGTTACTTTGACTTTTCAGAGCACACCCTTCCTCTGG	11	+	35209554-35209603	11p13b	Homo sapiens CD44 molecule (Indian blood group) (CD44), transcript variant 4, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1991450] [evidence NAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 16809613] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [pmid 18029348] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 8640758] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 8640758] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 1922057] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 1922057] [evidence NAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 2471973] [evidence NAS]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [pmid 1991450] [evidence NAS]	LHR; CDW44; ECMR-III; MGC10468; MDU2; CSPG8; Pgp1; IN; MUTCH-I; MIC4; MDU3; MC56; HCELL	LHR; CDW44; ECMR-III; MGC10468; MDU2; CSPG8; Pgp1; IN; MUTCH-I; MIC4; MDU3; MC56; HCELL
Homo sapiens	RefSeq	NM_006669.2	ILMN_26716	LILRB1	NM_006669.2	NM_006669.2		10859	19923781	NM_006669.2	LILRB1	NP_006660.1	ILMN_1708248	0000020246	S	2305	ACGCAGACCCCACACTCCATGGAGTCTGGAATGCATGGGAGCTGCCCCCC	19	+	59840153-59840202	19q13.42a	Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 (LILRB1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15304001] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9285411] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9285411] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with the enzyme protein phosphatase 1 [goid 8157] [pmid 9285411] [evidence TAS]	ILT2; MIR-7; CD85J; CD85; LIR1; MIR7; LIR-1	ILT2; MIR-7; CD85J; CD85; LIR1; MIR7; LIR-1
Homo sapiens	RefSeq	NM_015235.2	ILMN_25665	CSTF2T	NM_015235.2	NM_015235.2		23283	46094083	NM_015235.2	CSTF2T	NP_056050.1	ILMN_1807515	0002630400	S	3880	TTCCCATGTTTCCTATATGCCTCCCCTATATTGGAGAGGATAACTCGCGT	10	-	53455426-53455475	10q11.23c	Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant (CSTF2T), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CstF-64T; KIAA0689; DKFZp434C1013	CstF-64T; KIAA0689; DKFZp434C1013
Homo sapiens	RefSeq	NM_004093.2	ILMN_3827	EFNB2	NM_004093.2	NM_004093.2		1948	33359689	NM_004093.2	EFNB2	NP_004084.1	ILMN_1703852	0005090289	S	3978	GCTACAGCTTGTTTAACGGCAGTGTCATTCCCCTTTGCACTGTAATGAGG	13	-	107142387-107142436	13q33.3a	Homo sapiens ephrin-B2 (EFNB2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8660976] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8660976] [evidence TAS]	The process whose specific outcome is the progression of the lymphatic vasculature over time, from its formation to the mature structure [goid 1945] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8559144] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an ephrin receptor [goid 46875] [pmid 8559144] [evidence TAS]	MGC126227; LERK5; HTKL; EPLG5; MGC126226; Htk-L; MGC126228	MGC126227; LERK5; HTKL; EPLG5; MGC126226; Htk-L; MGC126228
Homo sapiens	RefSeq	XM_930882.1	ILMN_37226	FAM7A3	XM_930882.1	XM_930882.1		89837	89038122	XM_930882.1	FAM7A3	XP_935975.1	ILMN_1659862	0003400767	I	920	CAAGGGGCAATAGAGGGTAATTCTTAAGATTGTGGATGGACTGCTGGGTA	15	+	28216520-28216569	15q13.2a	PREDICTED: Homo sapiens family with sequence similarity 7, member A3, transcript variant 2 (FAM7A3), mRNA.					
Homo sapiens	RefSeq	NM_001004340.1	ILMN_29109	FCGR1B	NM_001004340.1	NM_001004340.1		2210	51972255	NM_001004340.1	FCGR1B	NP_001004340.1	ILMN_2391051	0006620209	A	7	TTCTTGACAACTCTGCTCCTTTGGGGCTGGCTACTACTGCAGGTCTCCAG	1	-	120731791-120731816:120737387-120737410	1p11.2a	Homo sapiens Fc fragment of IgG, high affinity Ib, receptor (CD64) (FCGR1B), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1430234] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1430234] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the Fc region of an immunoglobulin protein to initiate a change in cell activity [goid 19763] [pmid 1430234] [evidence NAS]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	CD64; IGFRB	CD64; IGFRB
Homo sapiens	RefSeq	NM_201631.2	ILMN_174072	TGM5	NM_201631.2	NM_201631.2		9333	94981555	NM_201631.2	TGM5	NP_963925.2	ILMN_2345564	0003450131	A	1728	ACCTACCCCTGCAAAATCTCCTATTCCCAGTACAGCCAGTACCTGTCAAC	15	-	43527072-43527121	15q15.2b	Homo sapiens transglutaminase 5 (TGM5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9452468] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 9452468] [evidence TAS]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]	Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [pmid 9452468] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]	MGC141907; TGM6; TGMX; TGX	MGC141907; TGM6; TGMX; TGX
Homo sapiens	RefSeq	NM_201631.2	ILMN_174072	TGM5	NM_201631.2	NM_201631.2		9333	94981555	NM_201631.2	TGM5	NP_963925.2	ILMN_2259966	0007320338	I	391	TGACGGCCTACCAGCTAGGGGAGTTCATCCTGCTTTTCAATCCCTGGTGC	15	-	43552253-43552302	15q15.2b	Homo sapiens transglutaminase 5 (TGM5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9452468] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 9452468] [evidence TAS]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]	Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [pmid 9452468] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]	MGC141907; TGM6; TGMX; TGX	MGC141907; TGM6; TGMX; TGX
Homo sapiens	RefSeq	XR_039085.1	ILMN_343512	LOC645094	XR_039085.1	XR_039085.1		645094	169208789	XR_039085.1	LOC645094		ILMN_3209180	0003850025	A	70	AATCATAACTCTATAGCCGCCACTGTCCGGCCACAGCCCCACACTCTTCA				15q15.1d	PREDICTED: Homo sapiens misc_RNA (LOC645094), miscRNA.					
Homo sapiens	RefSeq	NR_026552.1	ILMN_369991	NCRNA00161	NR_026552.1	NR_026552.1		118421	219521889	NR_026552.1	NCRNA00161		ILMN_3230631	0003610110	I	420	CCTGCTGGCACCTTCATCTTGGACTTTGAGCCTCTAGAACTGTGAGGCAA	21	+	29912059-29912108		Homo sapiens non-protein coding RNA 161 (NCRNA00161), non-coding RNA.					
Homo sapiens	RefSeq	NM_173550.2	ILMN_1625	C9ORF93	NM_173550.2	NM_173550.2		203238	38348728	NM_173550.2	C9orf93	NP_775821.2	ILMN_1764188	0003610040	S	4213	GTGCCCCATGCTCTGACATCATCTCACTCCTCTCCAGTGACTATGTCTGC	9	+	15724816-15724865	9p22.3b-p22.3a	Homo sapiens chromosome 9 open reading frame 93 (C9orf93), mRNA.				DKFZp686P12113; FLJ46740; bA536D16.1; FLJ39267; MGC50805; bA778P13.1	DKFZp686P12113; FLJ46740; bA536D16.1; FLJ39267; MGC50805; bA778P13.1
Homo sapiens	RefSeq	XM_943542.1	ILMN_1625	C9ORF93	NM_173550.2	NM_173550.2		203238	38348728	NM_173550.2	C9orf93	NP_775821.2	ILMN_1655893	0002060020	S	128	CCCAGGCAGCCCACGGGAATAAGAGCAAAAACTGTTGGAACACGACGGAC	9	+	15543224-15543273	9p22.3b-p22.3a	Homo sapiens chromosome 9 open reading frame 93 (C9orf93), mRNA.				DKFZp686P12113; FLJ46740; bA536D16.1; FLJ39267; MGC50805; bA778P13.1	
Homo sapiens	RefSeq	XM_929080.1	ILMN_40379	LOC646114	XM_929080.1	XM_929080.1		646114	89029180	XM_929080.1	LOC646114	XP_934173.1	ILMN_1678265	0000870672	S	413	TGATCCCAGCGCAGCCACAGCTTCTCCAGCCACACCTGCACTTCCTTGAC	9	+	11003040-11003089	9p23c	PREDICTED: Homo sapiens similar to A-kinase anchor protein 8 (LOC646114), mRNA.					
Homo sapiens	RefSeq	NM_133497.2	ILMN_23743	KCNV2	NM_133497.2	NM_133497.2		169522	28329446	NM_133497.2	KCNV2	NP_598004.1	ILMN_3248932	0006380577	S	1714	CAGCAAGCTGAAGGCTTATGAGTATACCACCATACGCAGGGAGAGGGGAG	9	+	2717669-2717718	9p24.2b	Homo sapiens potassium channel, subfamily V, member 2 (KCNV2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KV11.1; Kv8.2; MGC120515	KV11.1; Kv8.2; MGC120515
Homo sapiens	RefSeq	NM_007200.3	ILMN_13148	AKAP13	NM_144767.3	NM_144767.3		11214	31563332	NM_144767.3	AKAP13	NP_658913.1	ILMN_1709101	0000650050	A	7466	CATCTCACTAAGGGTTAAAGGCGTGCAACCCCCCACTGGCTGTGTCCCCT	15	+	84092975-84093024	15q25.3a-q25.3b	Homo sapiens A kinase (PRKA) anchor protein 13 (AKAP13), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9891067] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [pmid 1618839] [evidence NAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8290273] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16301118] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HA-3; FLJ11952; BRX; FLJ43341; c-lbc; PROTO-LB; Ht31; LBC; AKAP-Lbc; PROTO-LBC	HA-3; FLJ11952; BRX; FLJ43341; c-lbc; PROTO-LB; Ht31; LBC; AKAP-Lbc; PROTO-LBC
Homo sapiens	RefSeq	NM_053024.2	ILMN_1531	PFN2	NM_053024.2	NM_053024.2		5217	62422564	NM_053024.2	PFN2	NP_444252.1	ILMN_1710512	0004760471	I	715	CTTAAACTTTCCTAGCTATAAGCTTAAGTCTTAATTCTGGAAATTTTATT	3	-	151166877-151166926	3q25.1a	Homo sapiens profilin 2 (PFN2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence NAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with phosphatidylinositol-4,5-bisphosphate, a diphosphorylated derivative of phosphatidylinositol [goid 5546] [evidence NAS]	D3S1319E; PFL	D3S1319E; PFL
Homo sapiens	RefSeq	NM_053024.2	ILMN_1531	PFN2	NM_053024.2	NM_053024.2		5217	62422564	NM_053024.2	PFN2	NP_444252.1	ILMN_1775448	0006130538	A	1801	GCCATTATGGACATTAGGTATCCCAACATAACCATCTGGAGTGTGTCCAG	3	-	151165791-151165840	3q25.1a	Homo sapiens profilin 2 (PFN2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence NAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with phosphatidylinositol-4,5-bisphosphate, a diphosphorylated derivative of phosphatidylinositol [goid 5546] [evidence NAS]	D3S1319E; PFL	D3S1319E; PFL
Homo sapiens	RefSeq	NM_172140.1	ILMN_12594	IL29	NM_172140.1	NM_172140.1		282618	26024324	NM_172140.1	IL29	NP_742152.1	ILMN_2149624	0003290743	S	646	TGTGGCCGATGGGAACCTGTGTCTGAGAACGTCAACCCACCCTGAGTCCA	19	+	39789102-39789151	19q13.2a	Homo sapiens interleukin 29 (interferon, lambda 1) (IL29), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12483210] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; A protein complex that binds interleukin-28 and interleukin-29. Composed of two subunits, IL-28R alpha and IL-10R beta [goid 32002] [pmid 12469119] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 15166220] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 15899585] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 42531] [pmid 15166220] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45345] [pmid 12483210] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 12483210] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [pmid 16014923] [evidence TAS]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 16014923] [evidence IEP]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 12469119] [evidence IDA]	Interacting selectively with the interleukin-28 receptor [goid 32003] [pmid 12469119] [evidence IPI]	IL-29; IFNL1	IL-29; IFNL1
Homo sapiens	RefSeq	NM_172140.1	ILMN_12594	IL29	NM_172140.1	NM_172140.1		282618	26024324	NM_172140.1	IL29	NP_742152.1	ILMN_1684570	0007510753	S	255	CCAGGGACGCCTTGGAAGAGTCACTCAAGCTGAAAAACTGGAGTTGCAGC	19	+	39787219-39787232:39787445-39787480	19q13.2a	Homo sapiens interleukin 29 (interferon, lambda 1) (IL29), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12483210] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; A protein complex that binds interleukin-28 and interleukin-29. Composed of two subunits, IL-28R alpha and IL-10R beta [goid 32002] [pmid 12469119] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 15166220] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 15899585] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 42531] [pmid 15166220] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45345] [pmid 12483210] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 12483210] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [pmid 16014923] [evidence TAS]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 16014923] [evidence IEP]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 12469119] [evidence IDA]	Interacting selectively with the interleukin-28 receptor [goid 32003] [pmid 12469119] [evidence IPI]	IL-29; IFNL1	IL-29; IFNL1
Homo sapiens	RefSeq	NR_002798.1	ILMN_14058	NAPSB	NR_002798.1	NR_002798.1		256236	84872083	NR_002798.1	NAPSB		ILMN_2109416	0003290259	S	1073	CTTGGACATCGCTTCGCCTCCAGTACCTGTGTGGATCCTCGGCGACGTTT	19	-	55529076-55529125	19q13.33c	Homo sapiens napsin B aspartic peptidase pseudogene (NAPSB), non-coding RNA. XR_001413	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10591213] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10591213] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	NAPB; NAP1L; NAP2	NAPB; NAP1L; NAP2
Homo sapiens	RefSeq	NM_018221.1	ILMN_12322	MOBK1B	NM_018221.1	NM_018221.1		55233	8922670	NM_018221.1	MOBK1B	NP_060691.1	ILMN_2125562	0005960156	S	687	TTCTGTGATGCAGCTGCAAGAGGGGGCCCACCTCAACACCTCCTTTAAGC	2	-	74239744-74239793	2p13.1b	Homo sapiens MOB1, Mps One Binder kinase activator-like 1B (yeast) (MOBK1B), mRNA.				Mob4B; MOB1; MATS1; C2orf6; FLJ10788; FLJ11595	Mob4B; MOB1; MATS1; C2orf6; FLJ10788; FLJ11595
Homo sapiens	RefSeq	XM_001723616.1	ILMN_353171	LOC100129148	XM_001723616.1	XM_001723616.1		100129148	169171923	XM_001723616.1	LOC100129148	XP_001723668.1	ILMN_3273996	0007320192	M	268	GCTGCTGGAGCGGGACCTGTGGCGATGGCGTTTCTCCCGAGATTTGGATC				7q34b	PREDICTED: Homo sapiens hypothetical protein LOC100129148 (LOC100129148), mRNA.					
Homo sapiens	RefSeq	NM_004923.2	ILMN_46942	MTL5	NM_004923.3	NM_004923.3		9633	89111120	NM_004923.3	MTL5	NP_004914.2	ILMN_1661778	0007550719	S	2204	AGATATTTCCCCAGAGGCACGCGAACTGTCAGTCTTTCCTAAGGCCCCCG	11	-	68475189-68475238	11q13.2b	Homo sapiens metallothionein-like 5, testis-specific (tesmin) (MTL5), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The regulation of the levels, transport, and metabolism of metal ions within a cell or between a cell and its external environment [goid 6875] [pmid 10191092] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10191092] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus [goid 10038] [pmid 10191092] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [pmid 10191092] [evidence TAS]	TESMIN; MTLT; CXCDC2	TESMIN; MTLT
Homo sapiens	RefSeq	XR_038221.1	ILMN_337787	LOC389223	XR_038221.1	XR_038221.1		389223	169167106	XR_038221.1	LOC389223		ILMN_3279017	0006290349	M	1241	GGCAAGCCTATGTGTGTTGAGAGCTTCTCAGACTATCCACCTCTGCATTG				4q28.3f	PREDICTED: Homo sapiens misc_RNA (LOC389223), miscRNA.					
Homo sapiens	RefSeq	NM_014481.2	ILMN_171824	APEX2	NM_014481.2	NM_014481.2		27301	18375506	NM_014481.2	APEX2	NP_055296.2	ILMN_1652505	0001430047	S	1785	CCTAGCTCCTTGTTGGTGAGCTTCTTGTGCCTTAATCCTGTGACCCAGCC	X	+	55034020-55034069	Xp11.21a	Homo sapiens APEX nuclease (apurinic/apyrimidinic endonuclease) 2 (APEX2), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	XTH2; APEXL2; APE2	XTH2; APEXL2; APE2
Homo sapiens	RefSeq	XR_037558.1	ILMN_348508	LOC100133116	XR_037558.1	XR_037558.1		100133116	169162827	XR_037558.1	LOC100133116		ILMN_3246419	0002470377	S	1174	CCTCTCTGGAGGTGACCTTGGCCTTCAACCTGATCCGCTTCTCGACCAGC	1	+	26424226-26424275	1p36.11b	PREDICTED: Homo sapiens misc_RNA (LOC100133116), miscRNA.					
Homo sapiens	Unigene	Hs.575615	ILMN_127796	HS.575615	Hs.575615		Hs.575615		13343921	BG437415			ILMN_1884442	0006940504	S	810	ACAGGCAGAAGCGGGCACGTGGAGACGGATGCCAGAGGCTGGAGTGAAGT	9	-	137277373-137277375:137277378-137277421:137277423-137277425		602490627F1 NIH_MGC_18 Homo sapiens cDNA clone IMAGE:4622599 5, mRNA sequence					
Homo sapiens	RefSeq	NM_199462.1	ILMN_1333	RIPK5	NM_199462.1	NM_199462.1		25778	40806180	NM_199462.1	RIPK5	NP_955749.1	ILMN_2352023	0005560360	A	7569	ACAGCAGGACCGTCTTAATTGTGTGCATTTTGAAGAGATGCGACTCTGGG	1	-	203378372-203378421	1q32.1g	Homo sapiens receptor interacting protein kinase 5 (RIPK5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	RIP5; DustyPK; HDCMD38P; KIAA0472	RIP5; DustyPK; HDCMD38P; KIAA0472
Homo sapiens	RefSeq	NM_000359.1	ILMN_15028	TGM1	NM_000359.2	NM_000359.2		7051	110611244	NM_000359.2	TGM1	NP_000350.1	ILMN_1721134	0006370615	S	2590	GAGCAATGGGACTGGAGTCAGATGAGCAAGGACATTGCCCCAAGATAGGG	14	-	24718457-24718506	14q12a	Homo sapiens transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase) (TGM1), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [pmid 8824274] [evidence TAS]; An adherens junction which connects two cells to each other [goid 5913] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [pmid 8824274] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 1979171] [evidence NAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [pmid 8824274] [evidence IDA]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cell envelope, everything external to, but not including, the cytoplasmic membrane of bacteria, encompassing the periplasmic space, cell wall, and outer membrane if present [goid 43163] [pmid 14645372] [evidence TAS]	Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [pmid 7961731] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10510474] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7592852] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10066784] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9722562] [evidence IPI]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TGK; ICR2; KTG; LI1; LI; TGASE	TGK; ICR2; LI1; LI; TGASE
Homo sapiens	RefSeq	XR_040312.1	ILMN_345828	CXORF18	XR_040312.1	XR_040312.1		619455	169216463	XR_040312.1	CXorf18		ILMN_3265439	0003460075	M	1498	CTCCCCTCAAGAATTAAGCTGTGTTCTGGAAGATGAAAAGCAGCCCTCCC				Xq27.2a	PREDICTED: Homo sapiens chromosome X open reading frame 18 (CXorf18), miscRNA.					
Homo sapiens	RefSeq	NR_024584.1	ILMN_372108	LOC728875	NR_024584.1	NR_024584.1		728875	218082847	NR_024584.1	LOC728875		ILMN_3249203	0007160754	S	66	ACACCTAGGAAGGGAGAACTGGACTTATTTAATGGGGATGTGTTCAAGGC	1	-	144520842-144520871:144521884-144521903	1q21.1a	Homo sapiens hypothetical LOC728875 (LOC728875), non-coding RNA.					
Homo sapiens	RefSeq	NM_015522.2	ILMN_14439	DYNC2LI1	NM_016008.2	NM_016008.2		51626	40548412	NM_016008.2	DYNC2LI1	NP_057092.2	ILMN_1811836	0005720609	A	394	CCCATCACAGGTGACACCTTACGGACGTTTTCTCTTGTTCTCGTTCTGGA	2	+	43870342-43870364:43875100-43875126	2p21d	Homo sapiens dynein, cytoplasmic 2, light intermediate chain 1 (DYNC2LI1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	D2LIC; CGI-60; LIC3; DKFZP564A033	CGI-60; LIC3; D2LIC; DKFZP564A033
Homo sapiens	RefSeq	NM_016008.2	ILMN_14439	DYNC2LI1	NM_016008.2	NM_016008.2		51626	40548412	NM_016008.2	DYNC2LI1	NP_057092.2	ILMN_1712945	0002510474	I	1177	ATTTCTTCTTTTCCAAATACAAATAAGATTATACTGTGAATTAACTATTG	2	+	43890435-43890484	2p21d	Homo sapiens dynein, cytoplasmic 2, light intermediate chain 1 (DYNC2LI1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	D2LIC; CGI-60; LIC3; DKFZP564A033	CGI-60; LIC3; D2LIC; DKFZP564A033
Homo sapiens	RefSeq	XM_931123.1	ILMN_38564	LOC642468	XM_931123.1	XM_931123.1		642468	88978246	XM_931123.1	LOC642468	XP_936216.1	ILMN_1712405	0007380300	I	1258	CAGGGGGGAAAAGAAACCCTTACCCAGTACATTGATGCCTGACATGACGT	4	-	171078538-171078587		PREDICTED: Homo sapiens hypothetical protein LOC642467, transcript variant 2 (LOC642468), mRNA.					
Homo sapiens	RefSeq	XM_930699.1	ILMN_30585	LOC642269	XM_930699.1	XM_930699.1		642269	89028396	XM_930699.1	LOC642269	XP_935792.1	ILMN_1718352	0000240619	I	1110	TCCTCACCGGGACCCTGCGGCTCTGGGGAAACCTTAGCAGGAGCCTAACA	8	-	28493-28542		PREDICTED: Homo sapiens similar to Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1), transcript variant 2 (LOC642269), mRNA.					
Homo sapiens	RefSeq	NM_001005222.1	ILMN_180324	OR52A4	NM_001005222.1	NM_001005222.1		390053	52421342	NM_001005222.1	OR52A4	NP_001005222.1	ILMN_1704241	0003930224	S	540	CCACACTTACTGTGAACGCGTGGCCCTTGTGAAGCTTGCCACTGAAGATG	11	-	5142219-5142268	11p15.4c	Homo sapiens olfactory receptor, family 52, subfamily A, member 4 (OR52A4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	Unigene	Hs.102428	ILMN_74734	HS.102428	Hs.102428		Hs.102428		27831916	BX102688			ILMN_1896741	0000160372	S	97	TGGTAGAAGCAGCAGGGGGATCAACGAACAGGCTGAGCGCCAAGAAGCCT	2	+	11451654-11451703		BX102688 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGp998H094996, mRNA sequence					
Homo sapiens	RefSeq	XR_038827.1	ILMN_351121	LOC646201	XR_038827.1	XR_038827.1		646201	169206032	XR_038827.1	LOC646201		ILMN_3294380	0001260343	M	980	GAGACCATAAGTGACGGGCTCCAGCATGATACGCAAACCGCAGCAGCTCG				13q12.12a	PREDICTED: Homo sapiens misc_RNA (LOC646201), miscRNA.					
Homo sapiens	RefSeq	NM_152605.2	ILMN_16668	ZNF781	NM_152605.2	NM_152605.2		163115	46094067	NM_152605.2	ZNF781	NP_689818.2	ILMN_1780103	0000770204	S	2042	CAGGAATGCAGCAAGGCCTTTAAGCAGAGAGCCCATCTTAGTCAACATCA	19	-	42851476-42851525	19q13.12c	Homo sapiens zinc finger protein 781 (ZNF781), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC131783; FLJ37549	MGC131783; FLJ37549
Homo sapiens	Unigene	Hs.560095	ILMN_114050	HS.560095	Hs.560095		Hs.560095		23274728	BU608513			ILMN_1849420	0000730239	S	543	CCCAGTTTGCTACCCCTGGAAGCCTGAAACCTTCACCTTTGTCTCCTCAC	12	-	32057857-32057906		UI-CF-FN0-aep-m-02-0-UI.s1 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-aep-m-02-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001005613.1	ILMN_29218	EDA	NM_001005613.1	NM_001005613.1		1896	54112108	NM_001005613.1	EDA	NP_001005613.1	ILMN_1684000	0006020035	I	663	TCTTATGGCCTACAAGGTTTCTGCTGAGAAATCCACTGATATTCTAATGG	X	+	68806803-68806829:68806830-68806852	Xq13.1b	Homo sapiens ectodysplasin A (EDA), transcript variant 6, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8696334] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10484778] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9736768] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10484778] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IEA]	The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8696334] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [pmid 8696334] [evidence TAS]; The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity [goid 7431] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transfer of NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters, from the cytoplasm into the nucleus, across the nuclear membrane [goid 42346] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 11039935] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 11039935] [evidence IDA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	HED; ED1; EDA2; XHED; ED1-A2; ED1-A1; XLHED; EDA1	HED; ED1; EDA2; XHED; ED1-A2; ED1-A1; XLHED; EDA1
Homo sapiens	RefSeq	NM_000605.2	ILMN_25979	IFNA2	NM_000605.2	NM_000605.2		3440	11067750	NM_000605.2	IFNA2	NP_000596.2	ILMN_1698186	0003890762	S	788	CAGCTCTTAAGGCACTAGTCCCTTACAGAGGACCATGCTGACTGATCCAT	9	-	21374559-21374608	9p21.3c	Homo sapiens interferon, alpha 2 (IFNA2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10477584] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10477584] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 6158094] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10477584] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Interacting selectively with the interferon-alpha/beta receptor [goid 5132] [pmid 6158094] [evidence TAS]	INFA2; MGC125764; IFNA; MGC125765	INFA2; MGC125764; IFNA; MGC125765
Homo sapiens	Unigene	Hs.583506	ILMN_135687	HS.583506	Hs.583506		Hs.583506		1941821	AA293893			ILMN_1885944	0004070739	S	350	AGCCACATGAAGGGGAAGAGCCACAGGTCAGAAGGTCCCCAGAAAATGTC	7	+	78408028-78408077		zt61c05.r1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:726824 5, mRNA sequence					
Homo sapiens	RefSeq	XM_944991.1	ILMN_36432	C14ORF82	XM_944991.1	XM_944991.1		145438	89037674	XM_944991.1	C14orf82	XP_950084.1	ILMN_1690443	0007400594	A	2451	CAATGACTGCCTTTTAAATTAGCGGTACTCCAGCACTTTGGGAGGCCGAG				14q22.1c	PREDICTED: Homo sapiens chromosome 14 open reading frame 82 (C14orf82), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Homo sapiens	RefSeq	NM_001111112.1	ILMN_349750	UBE2K	NM_001111112.1	NM_001111112.1		3093	163660384	NM_001111112.1	UBE2K	NP_001104582.1	ILMN_3297392	0006220021	M	4923	ACCAGAAATACCATTGAAGCAGGGTGGGCTGTGGGGTGGAAGGTTGGGGT	4	+	39784219-39784268	4p14b	Homo sapiens ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) (UBE2K), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8702625] [evidence TAS]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 8702625] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	LIG; DKFZp686J24237; HYPG; DKFZp564C1216; HIP2; E2-25K	LIG; DKFZp686J24237; HIP2; HYPG; DKFZp564C1216; E2-25K
Homo sapiens	RefSeq	XM_001720849.1	ILMN_334604	LOC100131930	XM_001720849.1	XM_001720849.1		100131930	169209082	XM_001720849.1	LOC100131930	XP_001720901.1	ILMN_3235373	0002480474	S	2238	GGGTGTGAGGAGTCATTAGCAGTGAGGCCAAGTTTGGGAAGCCTGAGAGG					PREDICTED: Homo sapiens similar to hCG2004312, transcript variant 1 (LOC100131930), mRNA.					
Homo sapiens	RefSeq	XR_037336.1	ILMN_344604	LOC100131139	XR_037336.1	XR_037336.1		100131139	169217960	XR_037336.1	LOC100131139		ILMN_3210304	0001240408	A	2008	ACTTTAGGAGACGGAGGCGGGAGGGTCACTTGAGCCCAGGAATTGTGAGA					PREDICTED: Homo sapiens misc_RNA (LOC100131139), miscRNA.					
Homo sapiens	RefSeq	XR_037336.1	ILMN_344604	LOC100131139	XR_037336.1	XR_037336.1		100131139	169217960	XR_037336.1	LOC100131139		ILMN_3286809	0004480528	M	2145	TGGCGTTATGTCCTTAATTTTAAAACTCTTGATGCTGGCTGGGTTCGGTG					PREDICTED: Homo sapiens misc_RNA (LOC100131139), miscRNA.					
Homo sapiens	Unigene	Hs.423734	ILMN_90669	HS.423734	Hs.423734		Hs.423734		34531353	AK125302			ILMN_1846430	0000060487	S	2082	TCTTCGGCAATGCGGGCGTGACTTGGCGGGATGTCGgtgtttgtgtttgc	11	+	133416231-133416280		Homo sapiens cDNA FLJ43312 fis, clone NT2RI2012659					
Homo sapiens	RefSeq	XM_937669.1	ILMN_307315	ZBTB34	NM_001099270.1	NM_001099270.1		403341	149944639	NM_001099270.1	ZBTB34	NP_001092740.1	ILMN_1655206	0001400059	A	6001	GCAGATTCAGTCCACAGACCTCTTGCTGCCCCTCAGTGACAAGTATGCTG	9	+	128687415-128687464	9q33.3b	Homo sapiens zinc finger and BTB domain containing 34 (ZBTB34), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ22470; RP11-106H5.1; KIAA1993; MGC24652	
Homo sapiens	RefSeq	NM_014495.2	ILMN_172563	ANGPTL3	NM_014495.2	NM_014495.2		27329	41327750	NM_014495.2	ANGPTL3	NP_055310.1	ILMN_2143220	0006770427	S	2072	GGAGATGACTACTAAGTCACATTGACTTTAACATGAGGTATCACTATACC	1	+	62843714-62843763	1p31.3d	Homo sapiens angiopoietin-like 3 (ANGPTL3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 17110602] [evidence IDA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [pmid 12565906] [evidence IDA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 12565906] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 11877390] [evidence IPI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11877390] [evidence NAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 17110602] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [pmid 17110602] [evidence IDA]; Any process that decreases the frequency, rate or extent of phospholipase activity, the hydrolysis of a phospholipid [goid 10519] [pmid 17110602] [evidence IDA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [pmid 12565906] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 11877390] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 17110602] [evidence IDA]; Any process that activates or increases angiogenesis [goid 45766] [pmid 11877390] [evidence IDA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids [goid 50996] [pmid 12565906] [evidence IDA]; Any process that stops or reduces the activity of the enzyme lipoprotein lipase [goid 51005] [pmid 17110602] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of acylglycerol within an organism or cell [goid 55090] [pmid 17110602] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of phospholipid within an organism or cell [goid 55091] [pmid 17110602] [evidence IDA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence ISS]; Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [pmid 17110602] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [pmid 11877390] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 11877390] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 12565906] [evidence IDA]	ANGPT5	ANGPT5
Homo sapiens	RefSeq	NM_005512.1	ILMN_3568	LRRC32	NM_005512.1	NM_005512.1		2615	5031706	NM_005512.1	LRRC32	NP_005503.1	ILMN_2129161	0001400592	S	4033	CGCCTGATCTTTGAAAACACTACACAGGGCTGCTGTCACTTCCCAGGGCC	11	-	76046296-76046345	11q13.5b	Homo sapiens leucine rich repeat containing 32 (LRRC32), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8180135] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GARP; D11S833E	D11S833E; GARP
Homo sapiens	RefSeq	XM_927798.1	ILMN_39112	LOC644704	XM_927798.1	XM_927798.1		644704	89029589	XM_927798.1	LOC644704	XP_932891.1	ILMN_1712822	0000670471	S	3	GCCCTCCAAGAATGAGGATTTTTCCAATGCATTAGGTTGGGTCCCCTCAG	9	-	69436375-69436424	9q12j	PREDICTED: Homo sapiens similar to Ig kappa chain V-I region HK101 precursor (LOC644704), mRNA.					
Homo sapiens	RefSeq	NM_003286.2	ILMN_13071	TOP1	NM_003286.2	NM_003286.2		7150	19913404	NM_003286.2	TOP1	NP_003277.1	ILMN_1763419	0007000025	S	1705	CTGAGAGCAGGCAATGAAAAGGAGGAAGGAGAAACAGCGGACACTGTGGG	20	+	39176030-39176079	20q12b-q12c	Homo sapiens topoisomerase (DNA) I (TOP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9049244] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9049244] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [pmid 9049244] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9049244] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; Cell death resulting from activation of endogenous cellular processes [goid 12501] [pmid 17172417] [evidence NAS]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [pmid 17481653] [evidence NAS]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 16127745] [evidence IEP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 9049244] [evidence IDA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [pmid 17355975] [evidence IMP]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10352183] [evidence IPI]	TOPI	TOPI
Homo sapiens	RefSeq	NR_029516.1	ILMN_387993	MIR101-1	NR_029516.1	NR_029516.1		406893	262205766	NR_029516.1	MIR101-1		ILMN_3309473	0006960500	S	1	GCCCTGGCTCAGTTATCACAGTGCTGATGCTGTCTATTCTAAAGGTACAG				1p31.3b	Homo sapiens microRNA 101-1 (MIR101-1), microRNA.					
Homo sapiens	RefSeq	NM_002708.3	ILMN_26836	PPP1CA	NM_002708.3	NM_002708.3		5499	45827796	NM_002708.3	PPP1CA	NP_002699.1	ILMN_2377980	0004210414	A	1105	GCCAAGAAATAGCCCCCGCACACCACCCTGTGCCCCAGATGATGGATTGA	11	-	67165967-67166005:67166006-67166016	11q13.1f	Homo sapiens protein phosphatase 1, catalytic subunit, alpha isoform (PPP1CA), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 8392016] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8392016] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17511879] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PP-1A; MGC15877; MGC1674; PPP1A	PP-1A; MGC15877; MGC1674; PPP1A
Homo sapiens	RefSeq	XM_940079.1	ILMN_138016	TUBB6	XM_940079.1	XM_940079.1		84617	89047322	XM_940079.1	TUBB6	XP_945172.1	ILMN_1699489	0001570092	A	1319	TGGTGTCGGCCCCTCACAAATGCAGCCAAGTCATGTAATTAGTCATCTGG				18p11.21e	PREDICTED: Homo sapiens tubulin, beta 6 (TUBB6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	XM_930303.1	ILMN_41975	LOC644876	XM_930303.1	XM_930303.1		644876	89025251	XM_930303.1	LOC644876	XP_935396.1	ILMN_1708501	0003140504	S	193	GCACAATAGGTGTTCCTGTCCATTGTCTGCCGATTCAGCTATCTTTGATC	7	-	95617106-95617155		PREDICTED: Homo sapiens hypothetical protein LOC644876 (LOC644876), mRNA.					
Homo sapiens	RefSeq	NR_002196.1	ILMN_18538	H19	NR_002196.1	NR_002196.1		283120	57862814	NR_002196.1	H19		ILMN_2148527	0005340017	S	2002	GCACTAAGTCATTTGCACTGGTTGGAGTTGTGGAGACGGCCTTGAGTCTC	11	-	2016662-2016711	11p15.5b	Homo sapiens H19, imprinted maternally expressed transcript (non-protein coding) (H19), non-coding RNA.				MGC4485; D11S813E; ASM; ASM1; BWS; PRO2605	MGC4485; D11S813E; ASM; ASM1; BWS; PRO2605
Homo sapiens	RefSeq	NM_032267.1	ILMN_24994	RGSL2	NM_032267.1	NM_032267.1		84227	14150002	NM_032267.1	RGSL2	NP_115643.1	ILMN_1744701	0004540341	S	1500	GGATGTGATCCCCTGGATTCCCAAAGCCCAGAAGGAGATTTGCAAGATGC	1	+	180710255-180710300:180724043-180724046	1q25.3c	Homo sapiens regulator of G-protein signalling like 2 (RGSL2), mRNA.				DKFZp434E169	DKFZp434E169
Homo sapiens	RefSeq	NM_198994.1	ILMN_24265	TGM6	NM_198994.2	NM_198994.2		343641	148664231	NM_198994.2	TGM6	NP_945345.2	ILMN_1776214	0007150376	S	1946	GTCAACCCCCTCATAGAGAGAGTGAAGGACTGTGCGCTGATGGTGGAGGG	20	+	2359591-2359640	20p13d	Homo sapiens transglutaminase 6 (TGM6), mRNA.		The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]	Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TGY; dJ734P14.3; TGM3L	TGY; dJ734P14.3; TGM3L
Homo sapiens	RefSeq	NM_138499.2	ILMN_17964	PWWP2B	NM_138499.3	NM_138499.3		170394	148839375	NM_138499.3	PWWP2B	NP_612508.3	ILMN_1659852	0007380615	I	105	AGCTGCGGCGAGCGGAGCTTCGCGGGGATCCTGCTGGACTGCACGAAAAA	10	+	134060796-134060845	10q26.3e	Homo sapiens PWWP domain containing 2B (PWWP2B), transcript variant 1, mRNA.				pp8607; RP11-273H7.1; FLJ46823; FLJ39621; PWWP2; bA432J24.1	pp8607; RP11-273H7.1; FLJ46823; bA432J24.1
Homo sapiens	RefSeq	NM_138499.2	ILMN_17964	PWWP2B	NM_138499.3	NM_138499.3		170394	148839375	NM_138499.3	PWWP2B	NP_612508.3	ILMN_1764609	0002650020	A	2269	CTCAGCTTGGTCTCCCGCAGGCTTCAGAAAAACCCAATTGCACGTGTGGG	10	+	134081005-134081054	10q26.3e	Homo sapiens PWWP domain containing 2B (PWWP2B), transcript variant 1, mRNA.				pp8607; RP11-273H7.1; FLJ46823; FLJ39621; PWWP2; bA432J24.1	pp8607; RP11-273H7.1; FLJ46823; bA432J24.1
Homo sapiens	Unigene	Hs.538100	ILMN_103699	HS.538100	Hs.538100		Hs.538100		6568409	AW236020			ILMN_1908274	0001500575	S	56	GCAACAGTGAGGAGCTGTGTGGCCAGTTGGGGTTAAGTGTCACCTTCCAA	1	+	50675341-50675390		xn24e12.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2694670 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022451.9	ILMN_11360	NOC3L	NM_022451.9	NM_022451.9		64318	31377626	NM_022451.9	NOC3L	NP_071896.8	ILMN_2187727	0007560201	S	3328	ACAGCTATTCCCATATTCTAGGAGTGGCCTAAGAAATGCGTGTTTCAGTG	10	-	96099014-96099063	10q23.33b-q23.33c	Homo sapiens nucleolar complex associated 3 homolog (S. cerevisiae) (NOC3L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IEA]		FLJ12820; FAD24; AD24; C10orf117	FLJ12820; FAD24; AD24; C10orf117
Homo sapiens	RefSeq	XM_927067.1	ILMN_39025	LOC389722	XM_927067.1	XM_927067.1		389722	89030149	XM_927067.1	LOC389722	XP_932160.1	ILMN_1682931	0002970626	S	88	TTCATACCCCAGTTCTCTGCTGGTCATCCTTCCACCACAGCCAGGAGGCC	9	-	180807-180856		PREDICTED: Homo sapiens similar to cell recognition molecule CASPR3 (LOC389722), mRNA.					
Homo sapiens	RefSeq	NM_014904.1	ILMN_20755	RAB11FIP2	NM_014904.1	NM_014904.1		22841	7662393	NM_014904.1	RAB11FIP2	NP_055719.1	ILMN_1741175	0004860180	S	5475	GGTATGTAGAAGGGTCTGTCAGCACACATGGAAAGCCCCCATTTGCACAG	10	-	119754953-119755002	10q26.11b	Homo sapiens RAB11 family interacting protein 2 (class I) (RAB11FIP2), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding a recycling endosome [goid 55038] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		Rab11-FIP2; KIAA0941; nRip11	Rab11-FIP2; KIAA0941; nRip11
Homo sapiens	RefSeq	NM_014904.1	ILMN_20755	RAB11FIP2	NM_014904.1	NM_014904.1		22841	7662393	NM_014904.1	RAB11FIP2	NP_055719.1	ILMN_2072541	0004760630	S	5744	CATGTGGGCCTGTTAGTCTTCGAAGCTTCCAGATGGTTTGTGTTTTGAGG	10	-	119754684-119754733	10q26.11b	Homo sapiens RAB11 family interacting protein 2 (class I) (RAB11FIP2), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding a recycling endosome [goid 55038] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		Rab11-FIP2; KIAA0941; nRip11	Rab11-FIP2; KIAA0941; nRip11
Homo sapiens	RefSeq	NM_001101330.1	ILMN_348357	LOC728819	NM_001101330.1	NM_001101330.1		728819	157412239	NM_001101330.1	LOC728819	NP_001094800.1	ILMN_3246294	0002640327	S	834	GACCCCCCAAAAGATGGAAGTAATGATGTATGGCCTGTACCGGCTCAGGG	2	-	43902578-43902627	2p21d	Homo sapiens hCG1645220 (LOC728819), mRNA.					
Homo sapiens	RefSeq	NR_002588.1	ILMN_12256	SNORA4	NR_002588.1	NR_002588.1		619568	77993294	NR_002588.1	SNORA4		ILMN_3238672	0005490465	S	46	GCCAACTTGGGCTATTTGGAAGAGTAAAAGACCACACTCCACAGTGGGCT	3	+	186505447-186505496	3q27.3a	Homo sapiens small nucleolar RNA, H/ACA box 4 (SNORA4), small nucleolar RNA.				ACA4	ACA4
Homo sapiens	RefSeq	NM_012239.4	ILMN_25872	SIRT3	NM_012239.4	NM_012239.4		23410	63054856	NM_012239.4	SIRT3	NP_036371.1	ILMN_1724372	0005090446	I	170	TGAGTGCGGGGCTGAGAGGCAGCCATGGGGCCCGCGGTGAGCCCTTGGAC	11	-	226142-226191	11p15.5d	Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 3 (S. cerevisiae) (SIRT3), transcript variant 1, mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 10381378] [evidence TAS]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [pmid 10381378] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	SIR2L3	SIR2L3
Homo sapiens	RefSeq	NM_015299.1	ILMN_171989	KHNYN	NM_015299.2	NM_015299.2		23351	126723686	NM_015299.2	KHNYN	NP_056114.1	ILMN_1654392	0004640639	S	5897	ATCATTTGCCCTGGGTGTCCTTGGTCCTGCCTGGCTCTCTGTAGTGGAGG	14	+	23979989-23980038	14q12a	Homo sapiens KH and NYN domain containing (KHNYN), mRNA.					
Homo sapiens	RefSeq	NM_018300.2	ILMN_23108	ZNF83	NM_018300.2	NM_018300.2		55769	21361788	NM_018300.2	ZNF83	NP_060770.2	ILMN_2190414	0003130370	S	1923	CTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCGG	19	-	57808103-57808152	19q13.41a	Homo sapiens zinc finger protein 83 (ZNF83), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC33853; FLJ90585; HPF1; FLJ11015; ZNF816B; FLJ14876	MGC33853; FLJ90585; HPF1; FLJ11015; ZNF816B; FLJ14876
Homo sapiens	Unigene	Hs.527071	ILMN_100855	HS.527071	Hs.527071		Hs.527071		24723770	CA391675			ILMN_1903049	0002070280	S	432	TCCTCCTCCCAACTATGATCTAAGCTCTCTGAGAAGGGGCCTCACTTACC	4	+	15868764-15868813		cs17g03.y1 Human Retinal pigment epithelium/choroid cDNA (Un-normalized, unamplified): cs Homo sapiens cDNA clone cs17g03 5, mRNA sequence					
Homo sapiens	RefSeq	NM_007052.3	ILMN_2578	NOX1	NM_007052.3	NM_007052.3		27035	21614529	NM_007052.3	NOX1	NP_008983.1	ILMN_1778077	0001770315	I	2141	TCTGAAGTTCTTAAAGTTCTGAAGTTCTTAAAGCCCATGGATCCTTTCTC	X	-	99985307-99985356	Xq22.1c	Homo sapiens NADPH oxidase 1 (NOX1), transcript variant NOH-1L, mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 17673675] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2 [goid 43020] [pmid 16636067] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 11805326] [evidence IMP]; The chemical reactions and pathways involving nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; metabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6739] [pmid 10485709] [evidence IC ]; The chemical reactions and pathways involving the reduced form of flavin-adenine dinucleotide [goid 6746] [evidence NAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10615049] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 18347018] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 17673675] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 18347018] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus [goid 9268] [pmid 10615049] [evidence IDA]; Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor [goid 10575] [pmid 11805326] [evidence IEP]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 10615049] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 18023288] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IEA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [pmid 10485709] [evidence IDA]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [pmid 11331784] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins [goid 45726] [pmid 18023288] [evidence IMP]; A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 45730] [pmid 16636067] [evidence TAS]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [pmid 10485709] [evidence ISS]; Any process that increases the internal pH of a cell, measured by the concentration of the hydrogen ion [goid 51454] [pmid 10615049] [evidence IDA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16636067] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IEA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [pmid 10485709] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a proton by a voltage-gated channel [goid 30171] [pmid 10615049] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [pmid 16636067] [evidence IPI]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 10485709] [evidence IC ]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MOX1; NOH1; GP91-2; NOH-1	MOX1; NOH1; GP91-2; NOH-1
Homo sapiens	RefSeq	XR_000268.2	ILMN_36134	LOC441762	XR_000268.2	XR_000268.2		441762	89040328	XR_000268.2	LOC441762		ILMN_1657285	0004280379	S	1141	CTGTGGACAGAGAAGGGGATAAAGCGGCGGTGTCCCATGGGTGCCCGGGA	16	-	33867092-33867141		PREDICTED: Homo sapiens similar to CG7467-PA, isoform A (LOC441762), mRNA.					
Homo sapiens	RefSeq	NM_005086.3	ILMN_20454	SSPN	NM_005086.3	NM_005086.3		8082	16933560	NM_005086.3	SSPN	NP_005077.2	ILMN_1775486	0003360373	S	2525	GGCCTTCCTACACATTAGCTCCAGCTAAAAAGACACATTGGAGAGCTTAG	12	+	26276985-26277034	12p12.1a	Homo sapiens sarcospan (Kras oncogene-associated gene) (SSPN), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9395445] [evidence TAS]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 9395445] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9395445] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9395445] [evidence TAS]		SPN1; SPN2; KRAG	SPN1; SPN2; KRAG
Homo sapiens	RefSeq	XM_936529.1	ILMN_40048	LOC647466	XM_936529.1	XM_936529.1		647466	88952401	XM_936529.1	LOC647466	XP_941622.1	ILMN_1759402	0000110538	S	892	GGCTGCCTTGGTTTCATCCCTTGTCTTGCCTACTCCACCAGGCTCAGGAG					PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein isoform 1 (LOC647466), mRNA.					
Homo sapiens	Unigene	Hs.450769	ILMN_93750	HS.450769	Hs.450769		Hs.450769		19207169	BM850770			ILMN_1907861	0002000671	S	443	GCTGGAAAAGCAAAGAGGCCCAAGGAACAGCACAGACCCTGACTGGTGGG	12	+	66612934-66612983		K-EST0131410 S21SNU520 Homo sapiens cDNA clone S21SNU520-49-E06 5, mRNA sequence					
Homo sapiens	RefSeq	NM_003636.2	ILMN_7213	KCNAB2	NM_003636.2	NM_003636.2		8514	27436967	NM_003636.2	KCNAB2	NP_003627.1	ILMN_1725496	0005270082	A	2941	GATCAGCTTCTGCTATTACCGACCCCCCTTCATGCTGCCCCTGGCGCCTA	1	+	6082880-6082929	1p36.31b	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, beta member 2 (KCNAB2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA];  [goid 15459] [pmid 7649300] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	HKvbeta2.2; AKR6A5; MGC117289; HKvbeta2; KV-BETA-2; KCNA2B; HKvbeta2.1	HKvbeta2.2; AKR6A5; MGC117289; HKvbeta2; KV-BETA-2; KCNA2B; HKvbeta2.1
Homo sapiens	RefSeq	NM_003636.2	ILMN_7213	KCNAB2	NM_003636.2	NM_003636.2		8514	27436967	NM_003636.2	KCNAB2	NP_003627.1	ILMN_2342762	0001340196	A	2593	CAAGGGATGCCAGTAAGTCTGCAGGTGCGGGGTGCCACCTACAGGCCCAG	1	+	6082532-6082581	1p36.31b	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, beta member 2 (KCNAB2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA];  [goid 15459] [pmid 7649300] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	HKvbeta2.2; AKR6A5; MGC117289; HKvbeta2; KV-BETA-2; KCNA2B; HKvbeta2.1	HKvbeta2.2; AKR6A5; MGC117289; HKvbeta2; KV-BETA-2; KCNA2B; HKvbeta2.1
Homo sapiens	RefSeq	NM_017680.3	ILMN_23301	ASPN	NM_017680.3	NM_017680.3		54829	41350213	NM_017680.3	ASPN	NP_060150.3	ILMN_2168166	0004050431	S	2286	GGACTGGATAACTCTGAGAAACACATCTAGTATAACTGAATAAGCAGAGC	9	-	95218621-95218670	9q22.31a	Homo sapiens asporin (ASPN), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PLAP1; FLJ20129; SLRR1C	PLAP1; FLJ20129; SLRR1C
Homo sapiens	RefSeq	NM_001007097.1	ILMN_4716	NTRK2	NM_001007097.1	NM_001007097.1		4915	55956789	NM_001007097.1	NTRK2	NP_001007098.1	ILMN_1714067	0003870246	I	6646	GAGTGAGCACCCAGAATGTGTTGAACCAACCCCCACCCCTAACTACTGAC	9	+	86619976-86620025	9q21.33a	Homo sapiens neurotrophic tyrosine kinase, receptor, type 2 (NTRK2), transcript variant b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1710174] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 16939974] [evidence EXP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 1710174] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 16805430] [evidence EXP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with neurotrophin, any of a family of growth factors that block apoptosis in neurons and thus promote nerve growth [goid 43121] [pmid 1710174] [evidence TAS]	GP145-TrkB; TRKB	GP145-TrkB; TRKB
Homo sapiens	RefSeq	NM_182490.1	ILMN_12408	ZNF227	NM_182490.1	NM_182490.1		7770	32698785	NM_182490.1	ZNF227	NP_872296.1	ILMN_1721034	0001470187	S	2662	AGTCCATGCTGGTGGTAAACCCTGTAAAACTACTGAGAGTGGAAGGGGGT	19	+	44741040-44741089	19q13.31b	Homo sapiens zinc finger protein 227 (ZNF227), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001004124.1	ILMN_179373	OR4P4	NM_001004124.1	NM_001004124.1		81300	51871366	NM_001004124.1	OR4P4	NP_001004124.1	ILMN_1804845	0000290008	S	664	ACCATCAGAGCATACTCTGCAGAGAGACGCAGCAAAGCTCTTGCCACTTG	11	+	55163073-55163122	11q11b	Homo sapiens olfactory receptor, family 4, subfamily P, member 4 (OR4P4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR4P3P	OR4P3P
Homo sapiens	Unigene	Hs.79881	ILMN_73823	HS.79881	Hs.79881		Hs.79881		10439558	AK026659			ILMN_1842850	0007050553	S	1925	GGCATGGCAGCCAACTTTGTATCTGCTATTTTTAGTACGAGCAGAGCTTC	3	+	154041794-154041843		Homo sapiens cDNA: FLJ23006 fis, clone LNG00414					
Homo sapiens	RefSeq	NM_024895.3	ILMN_25299	PDZD7	NM_024895.3	NM_024895.3		79955	21914924	NM_024895.3	PDZD7	NP_079171.1	ILMN_1712660	0006280131	S	1686	CTGGACAGCGGGAGCCTGGCCAAAACTTACCCTCGCCTGGACATAGAGAA	10	-	102778823-102778872	10q24.31a	Homo sapiens PDZ domain containing 7 (PDZD7), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PDZK7	PDZK7
Homo sapiens	RefSeq	NM_144597.1	ILMN_18496	C15ORF40	NM_144597.1	NM_144597.1		123207	21389392	NM_144597.1	C15orf40	NP_653198.1	ILMN_1660585	0003130133	S	1054	CTGTTGGGGGGCCTTTGATTTCCTATATCCAGAAGTTGAGAGACTTACTC	15	-	81464710-81464759	15q25.2b	Homo sapiens chromosome 15 open reading frame 40 (C15orf40), mRNA.				MGC29937	MGC29937
Homo sapiens	RefSeq	XM_374137.4	ILMN_43354	LOC389328	XM_374137.4	XM_374137.4		389328	113416769	XM_374137.4	LOC389328	XP_374137.4	ILMN_3206672	0004640139	A	146	TGCGTGGCCCGGGACTTCAGCCGTGGCTTCGCGTCAAGAGGGTATTTTTC	5	-	134402671-134402720	5q31.1e	PREDICTED: Homo sapiens hypothetical LOC389328 (LOC389328), mRNA.					
Homo sapiens	RefSeq	XM_374137.4	ILMN_43354	LOC389328	XM_374137.4	XM_374137.4		389328	113416769	XM_374137.4	LOC389328	XP_374137.4	ILMN_3283180	0002030102	M	539	AATCCTGGCGCAGCTCCCTTGGGTTGCTGTGTCTGGTGGAGCTGATCACA	5	-	134399144-134399193	5q31.1e	PREDICTED: Homo sapiens hypothetical LOC389328 (LOC389328), mRNA.					
Homo sapiens	RefSeq	NM_003604.1	ILMN_27443	IRS4	NM_003604.1	NM_003604.1		8471	4504732	NM_003604.1	IRS4	NP_003595.1	ILMN_1712774	0001710487	S	3647	ACAACCCATCTGCAAACCTTGCCAGAGGTGATAACCAGGCTGGCGGGGCT	X	-	107862611-107862660	Xq22.3c	Homo sapiens insulin receptor substrate 4 (IRS4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9553137] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9261155] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9261155] [evidence TAS]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	IRS-4; PY160	IRS-4; PY160
Homo sapiens	RefSeq	XM_001723531.1	ILMN_334514	LOC729964	XM_001723531.1	XM_001723531.1		729964	169202971	XM_001723531.1	LOC729964	XP_001723583.1	ILMN_3220769	0000840048	A	144	TCGTGCTGCCCAAGGACATAGCCAAGCTGGTCCGTAAAACCCATTTGATG				11q14.1d	PREDICTED: Homo sapiens similar to Cks1 protein homologue (LOC729964), mRNA.					
Homo sapiens	RefSeq	NM_014374.1	ILMN_1054	REPIN1	NM_014374.1	NM_014374.1		29803	7656889	NM_014374.1	REPIN1	NP_055189.1	ILMN_2404385	0002940646	A	2668	GGTGACAGGAACTTCCGCACCTCCTGAGGCCCTGGATGATTCTAATTGTT	7	+	149701858-149701907	7q36.1c	Homo sapiens replication initiator 1 (REPIN1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [pmid 10606657] [evidence TAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 10606657] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10606657] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp464; RIP60; ZNF464; AP4	Zfp464; RIP60; ZNF464; AP4
Homo sapiens	RefSeq	XR_042367.1	ILMN_339821	LOC401875	XR_042367.1	XR_042367.1		401875	169210903	XR_042367.1	LOC401875		ILMN_3281539	0002640592	M	1299	TGCTGTTCCCATTCGACAGCCACACGTCTGTATGCACCGACTGCTCCACC	17	+	20457750-20457799	17p11.2c	PREDICTED: Homo sapiens misc_RNA (LOC401875), miscRNA.					
Homo sapiens	RefSeq	XM_001715097.1	ILMN_345807	LOC100130563	XM_001715097.1	XM_001715097.1		100130563	169205900	XM_001715097.1	LOC100130563	XP_001715149.1	ILMN_3265401	0004390767	M	591	GTCACAGCTACTATTCTTGGACAACCCAGCCCTACCCAAGCACCTCCTCC	13	-	20393961-20393978:20394023-20394054	13q12.11b	PREDICTED: Homo sapiens similar to CNOT4 protein (LOC100130563), partial mRNA.					
Homo sapiens	RefSeq	XM_002346379.1	ILMN_376984	FOXO6	XM_002346379.1	XM_002346379.1		100132074	239747319	XM_002346379.1	FOXO6	XP_002346420.1	ILMN_3311155	0005900142	I	1209	TTTGCCACACACTGTGGGGATTTTGAGAAGGCTCCAACAGCAAGGGGCTT				1p34.2c	PREDICTED: Homo sapiens forkhead box protein O6 (FOXO6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_181775.2	ILMN_22206	PLXNA4B	NM_181775.2	NM_181775.2		91584	34222359	NM_181775.2	PLXNA4B	NP_861440.1	ILMN_1749343	0002710411	S	1605	AATGCTCCCCTGGGAGTGTCCGACATGGTGCGTGGAATTCCCGTCTTCAC	7	-	131824684-131824733	7q32.3c-q32.3d	Homo sapiens plexin A4, B (PLXNA4B), mRNA.				PRO34003; FAYV2820; DKFZp434G0625PRO34003; DKFZp434G0625	PRO34003; FAYV2820; DKFZp434G0625PRO34003; DKFZp434G0625
Homo sapiens	RefSeq	NM_005644.2	ILMN_3797	TAF12	NM_005644.2	NM_005644.2		6883	9943840	NM_005644.2	TAF12	NP_005635.1	ILMN_1653367	0004200626	S	437	TTTATCGAGAGTGTGGTGACAGCAGCCTGTCAGCTTGCGCGGCATCGCAA	1	-	28812386-28812435	1p35.3b	Homo sapiens TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa (TAF12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [pmid 14580349] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7729427] [evidence TAS]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 7729427] [evidence TAS];  [goid 16986] [evidence IEA]	TAFII20; TAF2J	TAFII20; TAF2J
Homo sapiens	RefSeq	NM_153688.1	ILMN_24029	ZFP1	NM_153688.1	NM_153688.1		162239	24233531	NM_153688.1	ZFP1	NP_710155.1	ILMN_1695902	0003710592	S	3031	CCTAGGAATCTCCTGGGAATCTATCCCTAAGGAGTAAAAAGCGCCAGCAC	16	+	73763363-73763412	16q23.1a	Homo sapiens zinc finger protein 1 homolog (mouse) (ZFP1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ34243; ZNF475	FLJ34243; ZNF475
Homo sapiens	RefSeq	NM_006314.1	ILMN_7537	CNKSR1	NM_006314.1	NM_006314.1		10256	5453622	NM_006314.1	CNKSR1	NP_006305.1	ILMN_1718813	0005900343	S	2350	CCCTTGCCAAAGAAGAAACTCTCCCCCCAAATCCTCCAACCTCTGGGGCC	1	+	26388798-26388847	1p36.11b	Homo sapiens connector enhancer of kinase suppressor of Ras 1 (CNKSR1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9814705] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 9814705] [evidence TAS]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [pmid 15075335] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 9814705] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 14749388] [evidence IPI]	Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 14749388] [evidence IDA]	CNK; KSR; CNK1	CNK; KSR; CNK1
Homo sapiens	Unigene	Hs.14555	ILMN_71384	HS.14555	Hs.14555		Hs.14555		10437628	AK025166			ILMN_1839719	0001260014	S	1734	CCTATCAGGCCATGTAGGAAACTGTGTTCTTGTTATTGGTAGAGGGGCCC	10	+	98745471-98745520		Homo sapiens cDNA: FLJ21513 fis, clone COL05778					
Homo sapiens	RefSeq	NM_002536.1	ILMN_170649	TBC1D25	NM_002536.2	NM_002536.2		4943	124299170	NM_002536.2	TBC1D25	NP_002527.1	ILMN_1768491	0003290736	I	422	GGGACCTCAGCACAGCCTTTGCCACTGCCTCCAAACCTTACCTGCAATTG	X	+	48288278-48288327	Xp11.23d	Homo sapiens TBC1 domain family, member 25 (TBC1D25), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	MGC149732; MGC126866; MGC126868; OATL1; MGC149731; MG81	
Homo sapiens	RefSeq	NM_001006113.1	ILMN_170649	TBC1D25	NM_002536.2	NM_002536.2		4943	124299170	NM_002536.2	TBC1D25	NP_002527.1	ILMN_1681855	0003610450	A	2187	TCTCAAGCCCTCCATCGGCCCCACCAGATCTCCATTCTTTGCCATGAGGG	X	+	48304316-48304365	Xp11.23d	Homo sapiens TBC1 domain family, member 25 (TBC1D25), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	MGC149732; MGC126866; MGC126868; OATL1; MGC149731; MG81	
Homo sapiens	RefSeq	NM_000190.3	ILMN_16358	HMBS	NM_000190.3	NM_000190.3		3145	66933007	NM_000190.3	HMBS	NP_000181.2	ILMN_1685954	0006060278	I	140	TACTTTCCAAGCGGAGCCATGTCTGGTAACGGCAATGCGGCTGCAACGGC	11	+	118460936-118460953:118460954-118460985	11q23.3e	Homo sapiens hydroxymethylbilane synthase (HMBS), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]	Catalysis of the reaction: 4 porphobilinogen + H2O = hydroxymethylbilane + 4 NH3 [goid 4418] [pmid 2025226] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PBG-D; UPS; PBGD	PBG-D; UPS; PBGD
Homo sapiens	RefSeq	NM_001024382.1	ILMN_16358	HMBS	NM_000190.3	NM_000190.3		3145	66933007	NM_000190.3	HMBS	NP_000181.2	ILMN_1726306	0007320021	A	1345	GGAGACTGAACTGCAGGGTTCAAGCCTTCCAGGGATTTGCCTCACCTTGG	11	+	118469305-118469354	11q23.3e	Homo sapiens hydroxymethylbilane synthase (HMBS), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]	Catalysis of the reaction: 4 porphobilinogen + H2O = hydroxymethylbilane + 4 NH3 [goid 4418] [pmid 2025226] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PBG-D; UPS; PBGD	PBG-D; UPS; PBGD
Homo sapiens	RefSeq	XM_926086.1	ILMN_44011	LOC653114	XM_926086.2	XM_926086.2		653114	113420686	XM_926086.2	LOC653114	XP_931179.1	ILMN_1701630	0005820072	S	345	TCCCGGAGAAGACGTGGAAAGAGCTCAGAAACTCAGAGACTGTCCCGGAA	9	-	41301599-41301648	9p12b-p12a	PREDICTED: Homo sapiens hypothetical LOC653114 (LOC653114), mRNA.					
Homo sapiens	RefSeq	NM_020210.2	ILMN_25258	SEMA4B	NM_198925.1	NM_198925.1		10509	39777609	NM_198925.1	SEMA4B	NP_945119.1	ILMN_1672589	0005080280	A	3512	TGCCTTCCTCCGTTGTTGCGTGAGAACCCGTGTGCCCCTTCCCACCATAT	15	+	88573628-88573677	15q26.1b	Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B (SEMA4B), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	KIAA1745; SemC; SEMAC; MGC131831	KIAA1745; SemC; SEMAC; MGC131831
Homo sapiens	RefSeq	XM_001723315.1	ILMN_352725	LOC100130332	XM_001723315.1	XM_001723315.1		100130332	169171913	XM_001723315.1	LOC100130332	XP_001723367.1	ILMN_3273491	0004590519	M	181	GTCTTCCTCCATTACCGCTTAGAAAGATATGATTGTTTCTCCATTTACAA				7q33c	PREDICTED: Homo sapiens similar to PRO2474 (LOC100130332), mRNA.					
Homo sapiens	RefSeq	NM_001003677.1	ILMN_29991	C11ORF49	NM_001003677.1	NM_001003677.1		79096	51558747	NM_001003677.1	C11orf49	NP_001003677.1	ILMN_2341487	0003850438	A	783	CCCTCAGCAATGTTCAGAGACTGACCTTCTATGGATTCCTCATGGCTCTC	11	+	47115782-47115831	11p11.2b	Homo sapiens chromosome 11 open reading frame 49 (C11orf49), transcript variant 2, mRNA.				FLJ22210; MGC4707	FLJ22210; MGC4707
Homo sapiens	RefSeq	NM_020961.2	ILMN_26167	METTL14	NM_020961.2	NM_020961.2		57721	34147341	NM_020961.2	METTL14	NP_066012.1	ILMN_2124523	0005910706	S	1426	AAAGAGGTGGCTTTAGAGGGGGCCGTGGAGGAGCACACAGAGGTGGCTTT	4	+	119631396-119631445	4q26f	Homo sapiens methyltransferase like 14 (METTL14), mRNA.					
Homo sapiens	RefSeq	NM_003890.1	ILMN_181020	FCGBP	NM_003890.1	NM_003890.1		8857	4503680	NM_003890.1	FCGBP	NP_003881.1	ILMN_2302757	0000130609	A	16299	TGCATCATGTGCTCCTACCCTGCTCTACCGCTTTTCTGGGTCACAGAGGC	19	-	45045844-45045893	19q13.2b	Homo sapiens Fc fragment of IgG binding protein (FCGBP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]		FC(GAMMA)BP	FC(GAMMA)BP
Homo sapiens	RefSeq	Hs.583806	ILMN_168446	SNORD13	NR_003041.1	NR_003041.1		692084	94721317	NR_003041.1	SNORD13		ILMN_1892403	0007210035	S	18	GAGCGTGATGATTGGGTGTTCATACGCTTGTGTGAGATGTGCCACCCTTG	8	+	33371010-33371059	8p12c	Homo sapiens small nucleolar RNA, C/D box 13 (SNORD13), small nucleolar RNA.				U13	
Homo sapiens	RefSeq	XM_941388.1	ILMN_44349	LOC652067	XM_941388.1	XM_941388.1		652067	89037893	XM_941388.1	LOC652067	XP_946481.1	ILMN_1729428	0005130608	S	8	CGAGTTTGCAGGTGTCTAGTGAGAGTCAGATATGTTATGCCCAATCTGTG					PREDICTED: Homo sapiens similar to Ig heavy chain V-III region WEA (LOC652067), mRNA.					
Homo sapiens	RefSeq	NM_001126062.1	ILMN_364677	LOC646405	NM_001126062.1	NM_001126062.1		646405	186910185	NM_001126062.1	LOC646405	NP_001119534.1	ILMN_3239826	0002120470	S	242	GTATATCACCCCAGCGTTGACACACTGGGAACGGGTCACGCATGTGGATG				13q12.12b-q12.13a	Homo sapiens hypothetical LOC646405 (LOC646405), mRNA.					
Homo sapiens	RefSeq	NM_018064.2	ILMN_1311	AKIRIN2	NM_018064.2	NM_018064.2		55122	39725640	NM_018064.2	AKIRIN2	NP_060534.1	ILMN_2148847	0005690202	S	1248	CAAGCTTTCGTCAGTGGCAACCACTCTTAGGCAGCAGCAACTGGTTTTGG	6	-	88441872-88441921	6q15b	Homo sapiens akirin 2 (AKIRIN2), mRNA.				FLJ10342; dJ486L4.2	FLJ10342; dJ486L4.2
Homo sapiens	RefSeq	NM_024329.4	ILMN_13273	EFHD2	NM_024329.4	NM_024329.4		79180	42734435	NM_024329.4	EFHD2	NP_077305.2	ILMN_1761463	0001070544	S	2151	CAGCGCAGCAGCCTCGGACCCGGATTGCGTTTGCCTTAGCGGATATGTTT	1	+	15629208-15629257	1p36.21a	Homo sapiens EF-hand domain family, member D2 (EFHD2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC4342; RP3-467K16.3	MGC4342; RP3-467K16.3
Homo sapiens	RefSeq	NM_032227.2	ILMN_21681	TMEM164	NM_032227.2	NM_032227.2		84187	93277067	NM_032227.2	TMEM164	NP_115603.2	ILMN_2208373	0004610598	S	1108	GACCATGACCCACGGGAAGCTGGTCATCCTGTTCTCATACATGGCTGGGC	X	+	109303230-109303279	Xq22.3d	Homo sapiens transmembrane protein 164 (TMEM164), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP13-360B22.2; bB360B22.3; FLJ22679; FLJ20173	bB360B22.3; FLJ20173
Homo sapiens	RefSeq	NM_145030.1	ILMN_24554	C7ORF47	NM_145030.1	NM_145030.1		221908	21450760	NM_145030.1	C7orf47	NP_659467.1	ILMN_1741475	0001240592	S	742	TTATGAATCTCCACACCTGACCCTGGACGGTCTGCCCCCTCTCCGACTTC	7	-	99870986-99871035	7q22.1c	Homo sapiens chromosome 7 open reading frame 47 (C7orf47), mRNA.				MGC22793	MGC22793
Homo sapiens	RefSeq	NM_006988.3	ILMN_11081	ADAMTS1	NM_006988.3	NM_006988.3		9510	50845383	NM_006988.3	ADAMTS1	NP_008919.3	ILMN_1673566	0006900086	S	4239	GCCGGAACAAAAATGAGGTGTGTAGAACAGGGTCCCACAGGTTTGGGGAC	21	-	28208968-28209017	21q21.3a	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 1 (ADAMTS1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 8995297] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10438512] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1346; C3-C5; METH1	KIAA1346; C3-C5; METH1
Homo sapiens	RefSeq	NM_080751.1	ILMN_9631	TMC2	NM_080751.2	NM_080751.2		117532	94536851	NM_080751.2	TMC2	NP_542789.2	ILMN_1710269	0005670576	S	3038	GGAGTTGGGGAAGGGCCATGACCACCCTCGTAGACTTTTTCCATGGGATA	20	+	2559848-2559873:2560596-2560619	20p13d-p13c	Homo sapiens transmembrane channel-like 2 (TMC2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			dJ686C3.3; C20orf145	dJ686C3.3; C20orf145
Homo sapiens	Unigene	Hs.128035	ILMN_76539	HS.128035	Hs.128035		Hs.128035		3756307	AI203701			ILMN_1859393	0006100280	S	221	AGAGGGAGAGGTGGGGGTCCTGGGGTATTCCCAAAAGTGCTTGCCCCAGT	X	-	124286473-124286522		qf54c05.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1753832 3, mRNA sequence					
Homo sapiens	RefSeq	NM_013998.1	ILMN_21138	TAC1	NM_013997.1	NM_013997.1		6863	7770076	NM_013997.1	TAC1	NP_054703.1	ILMN_1790270	0003460301	A	325	GCCTCAGCAGTTCTTTGGATTAATGGGCAAACGGGATGCTGGACATGGCC	7	+	97201030-97201067:97202074-97202085	7q21.3d	Homo sapiens tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma) (TAC1), transcript variant gamma, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9548509] [evidence TAS]	Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 8957234] [evidence IDA]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The introduction of semen or sperm into the genital tract of a female [goid 7320] [pmid 1708336] [evidence TAS]; The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal [goid 9582] [pmid 9482938] [evidence TAS]		NKNA; Hs.2563; NK2; TAC2	NK2; NKNA; Hs.2563; TAC2
Homo sapiens	RefSeq	NM_001568.1	ILMN_24442	EIF3E	NM_001568.2	NM_001568.2		3646	83656779	NM_001568.2	EIF3E	NP_001559.1	ILMN_1739257	0002510019	S	1316	AGCAGGTCAGAGGCTCCTAACTGGGCAACTCAAGATTCTGGCTTCTACTG	8	-	109283290-109283328:109284388-109284398	8q23.1c	Homo sapiens eukaryotic translation initiation factor 3, subunit E (EIF3E), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex [goid 5852] [pmid 9295280] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 9295280] [evidence TAS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 9295280] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17324924] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	eIF3e; INT6; eIF3-p46; EIF3S6; EIF3-P48	eIF3e; INT6; eIF3-p46; EIF3-P48
Homo sapiens	Unigene	Hs.578161	ILMN_130342	HS.578161	Hs.578161		Hs.578161		82860522	DR979451			ILMN_1819784	0006560706	S	303	CGAAAACGTGGCCCCACTTCTGAGTGCTCGTCACCTGGCACAATACCTGG	14	-	76255417-76255466		SM014446 Placenta 3 EST Homo sapiens cDNA clone ID_14446 3', mRNA sequence					
Homo sapiens	RefSeq	NM_005259.1	ILMN_1997	MSTN	NM_005259.2	NM_005259.2		2660	149408158	NM_005259.2	MSTN	NP_005250.1	ILMN_1780516	0001690541	S	1814	CCATGCCAACGGTGCTAATACGATAGGCTGAATGTCTGAGGCTACCAGGT	2	-	190921381-190921430	2q32.2b	Homo sapiens myostatin (MSTN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9843994] [evidence TAS]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 14517293] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 9843994] [evidence TAS]	GDF8	MSTN
Homo sapiens	RefSeq	NM_003341.3	ILMN_13672	UBE2E1	NM_182666.1	NM_182666.1		7324	33359690	NM_182666.1	UBE2E1	NP_872607.1	ILMN_1806778	0002060465	A	1304	CTGTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGG	3	+	23907374-23907423	3p24.2b	Homo sapiens ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast) (UBE2E1), transcript variant 2, mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8576257] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The covalent addition to a protein of ISG15, a ubiquitin-like protein [goid 32020] [pmid 16428300] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 8576257] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the covalent attachment of the ubiquitin-like protein ISG15 to other proteins [goid 42296] [pmid 16428300] [evidence IDA]	UBCH6	UBCH6
Homo sapiens	RefSeq	NR_030164.1	ILMN_387796	MIR489	NR_030164.1	NR_030164.1		574442	262205165	NR_030164.1	MIR489		ILMN_3308365	0006420709	S	2	GGCAGCTTGGTGGTCGTATGTGTGACGCCATTTACTTGAACCTTTAGGAG				7q21.3a	Homo sapiens microRNA 489 (MIR489), microRNA.					
Homo sapiens	Unigene	Hs.564967	ILMN_117534	HS.564967	Hs.564967		Hs.564967		2743389	AA725682			ILMN_1912513	0002470289	S	334	AGCTGGAATCAGGAAGAAGGTGGTCGTTGGTGGGCTGGCCCTGTGGAGAT	16	+	9445363-9445395:9445398-9445414		ai19g05.s1 Soares_testis_NHT Homo sapiens cDNA clone 1343288 3, mRNA sequence					
Homo sapiens	RefSeq	NM_017866.3	ILMN_172853	TMEM70	NM_017866.4	NM_017866.4		54968	95007018	NM_017866.4	TMEM70	NP_060336.3	ILMN_1739032	0003780161	S	1952	TGTTTCTGCAACTGTGCACTCCTCCCTTGGTGGCACCCTATGGGTGTAGG	8	+	74894938-74894987	8q21.11a	Homo sapiens transmembrane protein 70 (TMEM70), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ20533	FLJ20533
Homo sapiens	RefSeq	NM_017866.4	ILMN_172853	TMEM70	NM_017866.4	NM_017866.4		54968	95007018	NM_017866.4	TMEM70	NP_060336.3	ILMN_2373010	0005690725	A	1572	CTTACGGTGAAGGTTCTAAGGCATGGGATCGTTTCCAGATGAGAATCCAC	8	+	74894558-74894607	8q21.11a	Homo sapiens transmembrane protein 70 (TMEM70), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ20533	FLJ20533
Homo sapiens	Unigene	Hs.541675	ILMN_105863	HS.541675	Hs.541675		Hs.541675		7151854	AW513776			ILMN_1884220	0006200477	S	173	GAACAGTGCAGGATGGAAGCAACACCTTCAGACTGGTCACAACTTCTTGC	2	-	167361428-167361477		xo88f02.x1 NCI_CGAP_Co17 Homo sapiens cDNA clone IMAGE:2737947 3 similar to contains element MER32 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	XM_926744.1	ILMN_31673	LOC643253	XM_926744.1	XM_926744.1		643253	89024945	XM_926744.1	LOC643253	XP_931837.1	ILMN_1807133	0001110477	I	3	TTTTCCGGAAGATCCGGATAGTGCATCCCGGCCACGGCGCGCCTGCTCTG	7	+	64853467-64853516	7q11.21d	PREDICTED: Homo sapiens similar to chaperonin subunit 6a (zeta), transcript variant 1 (LOC643253), mRNA.					
Homo sapiens	RefSeq	XM_931960.1	ILMN_40085	LOC643982	XM_931960.1	XM_931960.1		643982	89041908	XM_931960.1	LOC643982	XP_937053.1	ILMN_1805704	0007650154	S	730	ACCAAGGCTCCGGCCCGCTCTGCTGGCTCGTTTGAAACGTCGACATTCTC	17	-	76930344-76930393		PREDICTED: Homo sapiens hypothetical protein LOC643982 (LOC643982), mRNA.					
Homo sapiens	RefSeq	NM_018198.1	ILMN_14957	DNAJC11	NM_018198.2	NM_018198.2		55735	141802745	NM_018198.2	DNAJC11	NP_060668.1	ILMN_1747903	0000450408	S	1438	CAAGAGCAGGAAGAGCGAGAAGGTGAAGGTGATTGACGTGACTGTGCCCC	1	-	6619894-6619943	1p36.31a	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 11 (DNAJC11), mRNA.			Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	FLJ10737; RP1-126A5.3; dJ126A5.1	FLJ10737; RP1-126A5.3; dJ126A5.1
Homo sapiens	RefSeq	XM_372200.4	ILMN_43969	LOC389842	XM_942610.2	XM_942610.2		389842	113430333	XM_942610.2	LOC389842	XP_947703.1	ILMN_1804923	0005960040	A	133	CTGGTGGGTGTAGAATTGAGTCGTCATTTTGTGCAGGGCGATGGCAGTTG				Xp21.3d	PREDICTED: Homo sapiens similar to Ran-specific GTPase-activating protein (Ran-binding protein 1) (RanBP1) (LOC389842), mRNA.					
Homo sapiens	RefSeq	NM_001024943.1	ILMN_176343	ASL	NM_001024943.1	NM_001024943.1		435	68303541	NM_001024943.1	ASL	NP_001020114.1	ILMN_2379393	0006620598	A	1790	TTTGGAAGGGCAAGGTGCGAGGATGCTTGAGGCCAGGAGTTTGACACAGC	7	+	64895556-64895605	7q11.21e	Homo sapiens argininosuccinate lyase (ASL), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 282632] [evidence TAS]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [pmid 282632] [evidence TAS]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine [goid 42450] [evidence IEA]	Catalysis of the reaction: N-(L-arginino)succinate = fumarate + L-arginine [goid 4056] [pmid 282632] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	ASAL	ASAL
Homo sapiens	RefSeq	NM_006566.1	ILMN_3877	CD226	NM_006566.1	NM_006566.1		10666	5729807	NM_006566.1	CD226	NP_006557.1	ILMN_1687825	0003940754	S	2109	CTTGCCGCCATCCCAGGTCTAGCCTTAGGAGCAAATGTAGTAGATAGTCG	18	-	65681578-65681627	18q22.2a	Homo sapiens CD226 molecule (CD226), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8673704] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8673704] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8673704] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TLiSA1; PTA1; DNAM1; DNAM-1	TLiSA1; PTA1; DNAM1; DNAM-1
Homo sapiens	RefSeq	XM_939583.1	ILMN_46278	LOC644979	XM_928051.1	XM_928051.1		644979	89050225	XM_928051.1	LOC644979	XP_933144.1	ILMN_1694878	0002680035	S	904	GAGTCTGATGAGGATGTGCTTTGGTGTATTGATGAGGATGTGCTTTGGTG	19	-	254522-254571	19p13.3j	PREDICTED: Homo sapiens hypothetical LOC644979 (LOC644979), mRNA.					
Homo sapiens	RefSeq	XM_928051.1	ILMN_46278	LOC644979	XM_928051.1	XM_928051.1		644979	89050225	XM_928051.1	LOC644979	XP_933144.1	ILMN_1699058	0002940131	S	1948	GAGTCTGATGAGGATGTGCTTTGGTGTATTGACGAGGATGTGCTTTGGTG	19	-	253478-253527	19p13.3j	PREDICTED: Homo sapiens hypothetical LOC644979 (LOC644979), mRNA.					
Homo sapiens	RefSeq	XM_931142.1	ILMN_30663	LOC642883	XM_931142.1	XM_931142.1		642883	89035632	XM_931142.1	LOC642883	XP_936235.1	ILMN_1775568	0002630156	S	1	TCTTACAAAAGAAGATCCCCCAAAAAGGGATTGTCAAAGTAAATGTTACA	12	+	83187343-83187369:83188185-83188207		PREDICTED: Homo sapiens hypothetical protein LOC642883 (LOC642883), mRNA.					
Homo sapiens	RefSeq	XM_930705.1	ILMN_30591	LOC642267	XM_930705.1	XM_930705.1		642267	89033729	XM_930705.1	LOC642267	XP_935798.1	ILMN_1698519	0002230575	A	408	CTGTCCGTCTCGAATGACTGGAGTTTCCTGCTTCTGTCACTACACCTCCC	11	-	154283-154332		PREDICTED: Homo sapiens similar to hypothetical protein LOC284701, transcript variant 2 (LOC642267), mRNA.					
Homo sapiens	RefSeq	NM_021805.1	ILMN_181150	SIGIRR	XM_001129013.1	XM_001129013.1		59307	113422712	XM_001129013.1	SIGIRR	XP_001129013.1	ILMN_1807981	0004220193	A	663	GGATGATATGTAGCTCCCACCCCAGAGTGCAGGATCATAGGGACAGCGGG				11p15.5d	PREDICTED: Homo sapiens single immunoglobulin and toll-interleukin 1 receptor (TIR) domain (SIGIRR), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10346978] [evidence IMP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of the cytokine and chemokine mediated signaling pathway [goid 1960] [evidence ISS]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31665] [pmid 15866876] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 12925853] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45079] [evidence ISS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12925853] [evidence IPI]		TIR8; MGC110992
Homo sapiens	RefSeq	XM_938571.1	ILMN_181150	SIGIRR	XM_001129013.1	XM_001129013.1		59307	113422712	XM_001129013.1	SIGIRR	XP_001129013.1	ILMN_1804711	0003990487	I	18	GGTGGAGGTGATCCTGGACTTGATGGCCCCTCCCCGTGGTCCTGGGCTGC				11p15.5d	PREDICTED: Homo sapiens single immunoglobulin and toll-interleukin 1 receptor (TIR) domain (SIGIRR), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10346978] [evidence IMP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of the cytokine and chemokine mediated signaling pathway [goid 1960] [evidence ISS]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31665] [pmid 15866876] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 12925853] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45079] [evidence ISS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12925853] [evidence IPI]		
Homo sapiens	RefSeq	XM_941674.1	ILMN_137662	LOC649613	XM_941674.1	XM_941674.1		649613	89039012	XM_941674.1	LOC649613	XP_946767.1	ILMN_1776574	0000840424	S	166	CCCCTCGGGAATGCATCCTGACTTTGGTCAACACAGGCATTGGCATGACC					PREDICTED: Homo sapiens similar to Heat shock protein HSP 90-beta (HSP 84) (LOC649613), mRNA.					
Homo sapiens	RefSeq	XM_062871.7	ILMN_38935	LOC643677	XM_062871.7	XM_062871.7		643677	89036842	XM_062871.7	LOC643677	XP_062871.6	ILMN_1799985	0007210338	S	1	GATAAGATACCAGCAGCACTGGCCAAATGTTGCACATGGTTATGAGTTGG	13	-	102209367-102209416	13q33.1b	PREDICTED: Homo sapiens similar to Temporarily Assigned Gene name family member (tag-58) (LOC643677), mRNA.					
Homo sapiens	RefSeq	NM_022063.1	ILMN_12385	C10ORF84	NM_022063.1	NM_022063.1		63877	11545770	NM_022063.1	C10orf84	NP_071346.1	ILMN_2101719	0003310543	S	2216	AAGCAGGTGAACAAGACCAGGTGTGTCGGCACCTCCCTGCTCAGTGCCCA	10	-	120059041-120059090	10q26.11b	Homo sapiens chromosome 10 open reading frame 84 (C10orf84), mRNA.				RP11-319I23.1; FLJ13188; bA319I23.1	RP11-319I23.1; FLJ13188; bA319I23.1
Homo sapiens	RefSeq	NM_001010887.2	ILMN_14768	ACER2	NM_001010887.2	NM_001010887.2		340485	71043497	NM_001010887.2	ACER2	NP_001010887.2	ILMN_3235340	0000520500	S	2532	CCATTGTTGGGAGAGGGCAGGACAGGTGTGTTCTTCTGTGGGCAGGAGTC	9	+	19441519-19441568	9p22.1a	Homo sapiens alkaline ceramidase 2 (ACER2), mRNA.				ACER2; FLJ41587	ACER2; FLJ41587
Homo sapiens	RefSeq	NM_001010887.2	ILMN_14768	ACER2	NM_001010887.2	NM_001010887.2		340485	71043497	NM_001010887.2	ACER2	NP_001010887.2	ILMN_1761000	0001010307	S	2245	CGCTTGCAGTAGAAGGTGCTTTCTCGGTTTCCCAGAGTATCCAACGGCTC	9	+	19441232-19441281	9p22.1a	Homo sapiens alkaline ceramidase 2 (ACER2), mRNA.				ACER2; FLJ41587	ACER2; FLJ41587
Homo sapiens	RefSeq	XM_944245.1	ILMN_42899	LOC650534	XM_944245.1	XM_944245.1		650534	89036942	XM_944245.1	LOC650534	XP_949338.1	ILMN_1772791	0005390079	S	159	CGCCATTAGAGACCCAGCCAAACAATACGTGCGGAGCAAGAGCCGCGCAG					PREDICTED: Homo sapiens hypothetical protein LOC650534 (LOC650534), mRNA.					
Homo sapiens	RefSeq	NM_016121.3	ILMN_179202	KCTD3	NM_016121.3	NM_016121.3		51133	46255025	NM_016121.3	KCTD3	NP_057205.2	ILMN_2134555	0004250246	S	3485	CCCAGAAGGGAAAGCTGTACCAGTTGCTAACCTGTCTTGTTTCAGGAGCC	1	+	213861326-213861375	1q41a	Homo sapiens potassium channel tetramerisation domain containing 3 (KCTD3), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	MGC43935; NY-REN-45	MGC43935; NY-REN-45
Homo sapiens	RefSeq	NM_016121.3	ILMN_179202	KCTD3	NM_016121.3	NM_016121.3		51133	46255025	NM_016121.3	KCTD3	NP_057205.2	ILMN_1800220	0004590554	S	3041	GTGCCCATATAGGTGAGCATCCCTTTAGATCATGGGAACCAGCAGACTGC	1	+	213860882-213860931	1q41a	Homo sapiens potassium channel tetramerisation domain containing 3 (KCTD3), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	MGC43935; NY-REN-45	MGC43935; NY-REN-45
Homo sapiens	RefSeq	XR_037769.1	ILMN_337296	LOC100132086	XR_037769.1	XR_037769.1		100132086	169204644	XR_037769.1	LOC100132086		ILMN_3201895	0006200608	A	831	GAAGCCACAACATCCCACAAGGAAGAAATCGTGCATCAGCTGCCCAGCAA				12p11.1b	PREDICTED: Homo sapiens misc_RNA (LOC100132086), miscRNA.					
Homo sapiens	RefSeq	NM_001045475.1	ILMN_175469	LOC401387	NM_001045475.1	NM_001045475.1		401387	113865908	NM_001045475.1	LOC401387	NP_001038940.1	ILMN_2123478	0002370274	S	1293	CAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACC					Homo sapiens hypothetical protein LOC401387 (LOC401387), mRNA.					
Homo sapiens	RefSeq	NM_018951.2	ILMN_12295	HOXA10	NM_018951.3	NM_018951.3		3206	83977447	NM_018951.3	HOXA10	NP_061824.3	ILMN_1682110	0005270537	I	523	GAAGAGAGCTCCTACTGCCTCTACGACTCGGCGGACAAATGCCCCAAAGT	7	-	27213383-27213432	7p15.2a	Homo sapiens homeobox A10 (HOXA10), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8972230] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 7700356] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC12859; PL; HOX1H; HOX1; HOX1.8	MGC12859; PL; HOX1H; HOX1; HOX1.8
Homo sapiens	RefSeq	NM_153715.1	ILMN_12295	HOXA10	NM_018951.3	NM_018951.3		3206	83977447	NM_018951.3	HOXA10	NP_061824.3	ILMN_1689336	0000510097	A	2225	CAGAAGCCTAGGAGGACTGGGGTAAGCGGAATAAACTAGAGAAGGGAGAC	7	-	27210506-27210555	7p15.2a	Homo sapiens homeobox A10 (HOXA10), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8972230] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 7700356] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC12859; PL; HOX1H; HOX1; HOX1.8	MGC12859; PL; HOX1H; HOX1; HOX1.8
Homo sapiens	RefSeq	NM_052933.2	ILMN_2530	TSGA13	NM_052933.2	NM_052933.2		114960	31377632	NM_052933.2	TSGA13	NP_443165.1	ILMN_1758790	0000510424	S	1258	TATCAAAAAGGCCACGGTCATCGGGTGAACACAGACCCCTCAGTCCTCCC	7	-	130353831-130353853:130353854-130353880	7q32.2b	Homo sapiens testis specific, 13 (TSGA13), mRNA.					
Homo sapiens	RefSeq	NM_001025593.1	ILMN_15968	ARFIP1	NM_001025593.1	NM_001025593.1		27236	71040091	NM_001025593.1	ARFIP1	NP_001020764.1	ILMN_2403911	0002060630	A	1354	CCTAACAAGAATTAAGCAGAGTTGGGGGAAGTGGGAGGGGTGACAAGCAT	4	+	153831423-153831472	4q31.3c	Homo sapiens ADP-ribosylation factor interacting protein 1 (ARFIP1), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9038142] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9038142] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 12606037] [evidence IDA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [pmid 12606037] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	MGC117369; HSU52521	MGC117369; HSU52521
Homo sapiens	RefSeq	NM_001025593.1	ILMN_15968	ARFIP1	NM_001025593.1	NM_001025593.1		27236	71040091	NM_001025593.1	ARFIP1	NP_001020764.1	ILMN_2403906	0000010753	A	2474	TGGGACAGTGTGGTGGTACCAGGAAGAAAGAGGATTGGAAAGGCCAGTAC	4	+	153832543-153832592	4q31.3c	Homo sapiens ADP-ribosylation factor interacting protein 1 (ARFIP1), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9038142] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9038142] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 12606037] [evidence IDA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [pmid 12606037] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	MGC117369; HSU52521	MGC117369; HSU52521
Homo sapiens	Unigene	Hs.580105	ILMN_132286	HS.580105	Hs.580105		Hs.580105		83100726	DB297053			ILMN_1861230	0004290338	S	66	CCAGCCCACAGCTCATAGGGCCTTTCCTCCATCAGCGTTCTGGAATGAAG	2	+	164158476-164158510:164158512-164158526		DB297053 BRACE2 Homo sapiens cDNA clone BRACE2010483 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020421.2	ILMN_24747	ADCK1	NM_020421.2	NM_020421.2		57143	40254937	NM_020421.2	ADCK1	NP_065154.2	ILMN_1698777	0000780379	S	1900	CCCCACTACTTCCGTTAACCCTTCCCATTGTCAAGATGTGCCACGGGTGC	14	+	77469764-77469813	14q24.3d	Homo sapiens aarF domain containing kinase 1 (ADCK1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	FLJ39600	FLJ39600
Homo sapiens	RefSeq	XR_041640.1	ILMN_343675	C17ORF88	XR_041640.1	XR_041640.1		23591	169211318	XR_041640.1	C17orf88		ILMN_3263062	0006110327	M	573	TGAGCTATCATGTCGTAAGCCGGTGGAGAAGTCCAGGGCTAGTGTGGGGG				17q21.31b	PREDICTED: Homo sapiens misc_RNA (C17orf88), miscRNA.					
Homo sapiens	RefSeq	NM_001024599.1	ILMN_2946	HIST2H2BF	NM_001024599.2	NM_001024599.2		440689	84992988	NM_001024599.2	HIST2H2BF	NP_001019770.1	ILMN_1670093	0000020048	S	578	CTAAGGAGTTTCCTGTAGTCCTGTAATGAGTTGGCCCTCAGTCATCCCCG	1	-	148049908-148049957	1q21.2a	Homo sapiens histone cluster 2, H2bf (HIST2H2BF), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC131639	
Homo sapiens	RefSeq	NM_000608.2	ILMN_16361	ORM2	NM_000608.2	NM_000608.2		5005	40807473	NM_000608.2	ORM2	NP_000599.1	ILMN_1731785	0000450020	S	473	GCTGTTCCTTAGGGACACCAAGACCTTGATGTTTGGTTCCTACCTGGACG	9	+	116133696-116133745	9q32d	Homo sapiens orosomucoid 2 (ORM2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2970990] [evidence TAS]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [pmid 2970990] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AGP2; AGP-B; AGP-B'	AGP-B'; AGP2; AGP-B
Homo sapiens	Unigene	Hs.436307	ILMN_91651	HS.436307	Hs.436307		Hs.436307		6986382	AW444620			ILMN_1816625	0003400743	S	317	TCCCTCCTCAGAATCATTCCTTGACCAGTCCCTGCTCACCATAGTACTGC	2	-	68925334-68925383		UI-H-BI3-ajw-a-11-0-UI.s1 NCI_CGAP_Sub5 Homo sapiens cDNA clone IMAGE:2733212 3, mRNA sequence					
Homo sapiens	RefSeq	NM_080663.1	ILMN_1223	EXOD1	NM_080663.1	NM_080663.1		112479	18087834	NM_080663.1	EXOD1	NP_542394.1	ILMN_1657662	0007100059	S	1393	GGGTACTGATGGGCCAACACACTACAGCCTACTGGCAAAATCTGACTTGC	16	-	20699052-20699101	16p12.2c	Homo sapiens exonuclease domain containing 1 (EXOD1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC16943; KIAA1504	MGC16943; KIAA1504
Homo sapiens	RefSeq	NM_144611.2	ILMN_26268	CYB5D2	NM_144611.2	NM_144611.2		124936	40255061	NM_144611.2	CYB5D2	NP_653212.1	ILMN_1696254	0002630333	S	1523	TCCCTTTGACCTACTGGCCATCTTCCTCACAGCCCTCAGATATCAACGGG	17	+	4007353-4007402	17p13.2c	Homo sapiens cytochrome b5 domain containing 2 (CYB5D2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	MGC32124	MGC32124
Homo sapiens	Unigene	Hs.125087	ILMN_76085	HS.125087	Hs.125087		Hs.125087		21176493	BQ437417			ILMN_1835092	0003990010	S	250	GGGGTAACACAGAGTGCCCTTATGAAGGAGTTGGAGATCCTgcaaggaag	1	+	78882511-78882560		AGENCOURT_7914287 NIH_MGC_71 Homo sapiens cDNA clone IMAGE:6156595 5, mRNA sequence					
Homo sapiens	RefSeq	NM_006512.1	ILMN_630	SAA4	NM_006512.1	NM_006512.1		6291	10835094	NM_006512.1	SAA4	NP_006503.1	ILMN_1668055	0003710022	S	494	AAACTGGGCTGTGAGCCACACACTTCTCCCCCCAGACAGGGACACAGGGT	11	-	18209549-18209598	11p15.1d	Homo sapiens serum amyloid A4, constitutive (SAA4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	CSAA; C-SAA	CSAA; C-SAA
Homo sapiens	RefSeq	NM_001077242.1	ILMN_170788	DEPDC7	NM_001077242.1	NM_001077242.1		91614	116256341	NM_001077242.1	DEPDC7	NP_001070710.1	ILMN_2280960	0003990358	I	19	TTAACAGACGGGCGCTCAGGGAGCTAGGGAGCTGTGAAGCTGCTGGAGGA	11	+	32994004-32994053	11p13d	Homo sapiens DEP domain containing 7 (DEPDC7), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	dJ85M6.4	dJ85M6.4
Homo sapiens	RefSeq	NM_001077242.1	ILMN_170788	DEPDC7	NM_001077242.1	NM_001077242.1		91614	116256341	NM_001077242.1	DEPDC7	NP_001070710.1	ILMN_2383163	0002630669	A	770	GCAAGAGGCTGTACCTAAAATTCCTCAACCTAAGAGGCAGTCCACCATGG	11	+	33006810-33006859	11p13d	Homo sapiens DEP domain containing 7 (DEPDC7), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	dJ85M6.4	dJ85M6.4
Homo sapiens	RefSeq	XR_040710.1	ILMN_338129	LOC728114	XR_040710.1	XR_040710.1		728114	169204672	XR_040710.1	LOC728114		ILMN_3202980	0006960671	A	605	GCTATGGTGGTGAGATTTGTCCTCTGCAAACCATGACGGTGGTAGCTGGC				12q13.11c	PREDICTED: Homo sapiens misc_RNA (LOC728114), miscRNA.					
Homo sapiens	RefSeq	NM_001001703.1	ILMN_21918	FLJ46010	NM_001001703.1	NM_001001703.1		401191	48717412	NM_001001703.1	FLJ46010	NP_001001703.1	ILMN_1699072	0004480343	S	1978	GTGGTCATCTCAGAATGGTCTCTGAACCAGCAGCATCAGCAGCACCTTGG	5	+	65903160-65903209	5q12.3b-q12.3c	Homo sapiens FLJ46010 protein (FLJ46010), mRNA.					
Homo sapiens	RefSeq	NR_031752.1	ILMN_388674	MIR548Q	NR_031752.1	NR_031752.1		100313841	269847730	NR_031752.1	MIR548Q		ILMN_3310578	0007200470	S	22	ATGGCGGTTTTTGCCATTACTTTTCATTTTTACCATTAAAAGTAATGGCA					Homo sapiens microRNA 548q (MIR548Q), microRNA.					
Homo sapiens	RefSeq	XR_037691.1	ILMN_350901	LOC100132920	XR_037691.1	XR_037691.1		100132920	169214528	XR_037691.1	LOC100132920		ILMN_3248063	0002340112	S	1907	GGAGCAGAGCCTGAAGAGAAACTGACTGGGCTTTCGGGGTCGGGGCAGAG	20	-	62392914-62392963	20q13.33e	PREDICTED: Homo sapiens misc_RNA (LOC100132920), miscRNA.					
Homo sapiens	RefSeq	NM_058238.1	ILMN_171536	WNT7B	NM_058238.1	NM_058238.1		7477	17505192	NM_058238.1	WNT7B	NP_478679.1	ILMN_2153495	0001500500	S	1677	CACATAGCCAGTCCTAACTCCGTACTCTGTGTCAGCCCATCCCCTAGACA	22	-	44696820-44696869	22q13.31c	Homo sapiens wingless-type MMTV integration site family, member 7B (WNT7B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]		
Homo sapiens	RefSeq	NM_001135789.1	ILMN_370929	PPIAL4C	NM_001135789.1	NM_001135789.1		653598	209417935	NM_001135789.1	PPIAL4C	NP_001129261.1	ILMN_3241899	0001300446	S	3498	AGGGGTATTAATAATTTAAAGAGTTTAATTACTTTTTACTACTAGAAAAC				1q21.1e	Homo sapiens peptidylprolyl isomerase A (cyclophilin A)-like 4C (PPIAL4C), mRNA.					
Homo sapiens	RefSeq	NM_001448.2	ILMN_11696	GPC4	NM_001448.2	NM_001448.2		2239	21614524	NM_001448.2	GPC4	NP_001439.2	ILMN_1789502	0006330270	S	3282	GTCCCAGGCCAAAGACTAACAACTGCCTTGGGAATCCCTTCCTTGTGTCC	X	-	132435446-132435495	Xq26.2b	Homo sapiens glypican 4 (GPC4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9931407] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9787072] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9787072] [evidence TAS]		K-glypican	K-glypican
Homo sapiens	RefSeq	NM_030912.1	ILMN_22610	TRIM8	NM_030912.2	NM_030912.2		81603	148596967	NM_030912.2	TRIM8	NP_112174.2	ILMN_1746704	0000940435	S	2570	GAGGGGCTGCCCGGAGTTGGGTCCTTGCCTGGATTTTGACACAGCAACTT	10	+	104407199-104407248	10q24.32b	Homo sapiens tripartite motif-containing 8 (TRIM8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11118312] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF27; GERP	RNF27; GERP
Homo sapiens	RefSeq	NM_182526.1	ILMN_29295	FLJ33387	NM_182526.1	NM_182526.1		161145	32698889	NM_182526.1	FLJ33387	NP_872332.1	ILMN_1692874	0002320630	S	2647	AGGCCTGAGAGAGATCCCCTCATCTCACCATGTAAGGACACAGCAGAAGG	14	-	66983669-66983718	14q24.1a	Homo sapiens hypothetical protein FLJ33387 (FLJ33387), mRNA.					
Homo sapiens	Unigene	Hs.125470	ILMN_76127	HS.125470	Hs.125470		Hs.125470		27824974	BX091766			ILMN_1846026	0000730408	S	495	CTAGGGGCTGGAAACCATCACTGTTTGCCTGTACTGTCCTTCTCCTGTCG	12	-	58203349-58203398		BX091766 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998L023711 ; IMAGE:1467409, mRNA sequence					
Homo sapiens	RefSeq	NM_020157.2	ILMN_15774	OTOR	NM_020157.2	NM_020157.2		56914	21618345	NM_020157.2	OTOR	NP_064542.1	ILMN_1718124	0003190703	S	940	GCCTTTTGGAGGTAAAGCTGTTGGGGGAAGAAGAGTTTTTGGACCCATAG	20	+	16680272-16680321	20p12.1a	Homo sapiens otoraplin (OTOR), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10873378] [evidence TAS]		MIAL; MGC126739; MIAL1; MGC126737; FDP	MIAL; MGC126739; MIAL1; MGC126737; FDP
Homo sapiens	RefSeq	XM_001721753.1	ILMN_344713	LOC100129484	XM_001721753.1	XM_001721753.1		100129484	169172126	XM_001721753.1	LOC100129484	XP_001721805.1	ILMN_3187744	0004730095	A	121	AAACACGCTCGCGGTGGACTTTAACCTTGGGCTGAAACCACAGCGCTTTG				7p22.1c	PREDICTED: Homo sapiens hypothetical protein LOC100129484 (LOC100129484), mRNA.					
Homo sapiens	RefSeq	NM_016449.2	ILMN_26459	C22ORF43	NM_016449.2	NM_016449.2		51233	56118954	NM_016449.2	C22orf43	NP_057533.2	ILMN_1766178	0005810484	S	1027	GGGTCCCCAGCTTTGCCCCTGGAGGTCTCAATCCTCTCTACATTCTGAGG	22	-	23950841-23950890	22q11.23a	Homo sapiens chromosome 22 open reading frame 43 (C22orf43), mRNA.				MGC33025; MGC75009	MGC33025; MGC75009
Homo sapiens	RefSeq	NM_152418.2	ILMN_27730	WDR21C	NM_152418.2	NM_152418.2		138009	45243529	NM_152418.2	WDR21C	NP_689631.1	ILMN_1768454	0006660142	S	2602	CACTGTTGTAGGTTGGTCAGGAAAGGGAATGATTGTGGCTTGGACCTGAC	8	-	88952761-88952810	8q21.3b	Homo sapiens WD repeat domain 21C (WDR21C), mRNA.				FLJ35775; MGC133227	FLJ35775; MGC133227
Homo sapiens	RefSeq	XR_039017.1	ILMN_345617	LOC100133800	XR_039017.1	XR_039017.1		100133800	169164684	XR_039017.1	LOC100133800		ILMN_3287952	0006760056	M	1038	TAGCCGAGAGGTAACTCCAATTCTTGCACAAACACAAAGTTCTGGTCCAT					PREDICTED: Homo sapiens misc_RNA (LOC100133800), miscRNA.					
Homo sapiens	RefSeq	NM_005316.2	ILMN_182359	GTF2H1	NM_005316.2	NM_005316.2		2965	19923304	NM_005316.2	GTF2H1	NP_005307.1	ILMN_2157957	0003420719	S	2783	GTCCTTGGCGAATCGATAATCATTGCATAGTGACTGAAAAGCCTAAGTGC	11	+	18344968-18345017	11p15.1c	Homo sapiens general transcription factor IIH, polypeptide 1, 62kDa (GTF2H1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; A complex that contains kinase activity directed towards the C-terminal Domain (CTD) of the largest subunit of RNA polymerase II and is essential for initiation at RNA polymerase II promoters in vitro. In S. cerevisiae, it is composed of the 5-subunit core (Rad3p, Tfb1p, Tfb2p, Ssl1p and Tfb4p), Ssl2p, and TFIIK (Kin28p, Ccl1p, and Tfb3p). All of the subunits have equivalents in humans: the 5 subunit core is composed of XPD, p62, p55, p44, p34; the equivalent of the TFIIK subcomplex is composed of MO15, Mat1, and a cyclin; the human equivalent of Ssl2p is XPB [goid 5675] [pmid 9118947] [evidence TAS]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 7533895] [evidence TAS]; The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9118947] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 8692841] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8652557] [evidence IPI]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [pmid 7533895] [evidence TAS]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 9118947] [evidence TAS]	BTF2; TFIIH	BTF2; TFIIH
Homo sapiens	RefSeq	NM_006681.1	ILMN_28975	NMU	NM_006681.1	NM_006681.1		10874	5729946	NM_006681.1	NMU	NP_006672.1	ILMN_2162253	0007050220	S	486	GCTGCAGCTCGTTCCTCACCTGCATGAGAGAAGAATGAAGAGATTCAGAG	4	-	56166204-56166253	4q12d	Homo sapiens neuromedin U (NMU), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IEA]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [pmid 7619205] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7619205] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 7619205] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 10811630] [evidence TAS]		
Homo sapiens	RefSeq	XM_944678.1	ILMN_31119	C20ORF194	XM_944678.1	XM_944678.1		25943	89057945	XM_944678.1	C20orf194	XP_949771.1	ILMN_1672066	0001450021	I	1969	CTCTAATGTGAAACAGCAGGAGGTAGCCCCACCTCCCATCCTCACGCTCC				20p13c-p13b	PREDICTED: Homo sapiens chromosome 20 open reading frame 194, transcript variant 3 (C20orf194), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_001018025.2	ILMN_20771	MTCP1	NM_014221.3	NM_014221.3		4515	66932919	NM_014221.3	MTCP1	NP_055036.1	ILMN_1814230	0000990615	A	1600	CAGGCTGTCATCCAAGAACTGCGTAAGTGTTGTGCTCAGTATCCCAAGGG	X	-	153943384-153943433	Xq28h	Homo sapiens mature T-cell proliferation 1 (MTCP1), nuclear gene encoding mitochondrial protein, transcript variant B1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8361760] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8361760] [evidence TAS]		C6.1B	C6.1B
Homo sapiens	RefSeq	XM_372030.4	ILMN_46707	LOC389633	XM_372030.4	XM_372030.4		389633	89027890	XM_372030.4	LOC389633	XP_372030.1	ILMN_1800380	0002450471	A	1778	CTCCTGAGAAGCTGGGAGTCTTCCTCGCTCAGAGCCCTCATGTGTCAGAG	8	-	12317058-12317107	8p23.1a	PREDICTED: Homo sapiens hypothetical LOC389633, transcript variant 1 (LOC389633), mRNA.					
Homo sapiens	RefSeq	XM_937258.1	ILMN_41058	LOC648213	XM_937258.2	XM_937258.2		648213	113413917	XM_937258.2	LOC648213	XP_942351.2	ILMN_1672991	0005260193	S	1012	CAGGTCTCCATGGAACCAGAAGAGAACAGGAAGAAAGATGGCGAAGAGGA					PREDICTED: Homo sapiens similar to Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) (LOC648213), mRNA.					
Homo sapiens	RefSeq	NM_001023567.1	ILMN_14405	GOLGA8B	NM_001023567.1	NM_001023567.1		440270	66472908	NM_001023567.1	GOLGA8B	NP_001018861.1	ILMN_1803385	0002260743	S	4155	GGCTATACGATCGCAGAGTTGTATTTCCTCACAAACTTCTTTACGAAGAG				15q14a	Homo sapiens golgi autoantigen, golgin subfamily a, 8B (GOLGA8B), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			KIAA0855; GOLGA5	KIAA0855; GOLGA5
Homo sapiens	Unigene	Hs.541191	ILMN_105596	HS.541191	Hs.541191		Hs.541191		6837380	AW340754			ILMN_1892765	0000580520	S	118	TTCATTCACAGTAGCAATCTTCTGGCACAATCAGTAATGCAAACCAGGGG	19	-	61949410-61949459		hd01g11.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2908292 3 similar to contains L1.t2 L1 repetitive element ;, mRNA sequence					
Homo sapiens	Unigene	Hs.567096	ILMN_119299	HS.567096	Hs.567096		Hs.567096		18970661	BM664501			ILMN_1821510	0006960681	S	524	CTTTGTAGATTGGTTCTGTGTTGGGTACTCCTTCAATGGCATGTCAGGCC					UI-E-CL1-afa-l-14-0-UI.s1 UI-E-CL1 Homo sapiens cDNA clone UI-E-CL1-afa-l-14-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_133502.1	ILMN_18462	ZNF274	NM_133502.1	NM_133502.1		10782	19743800	NM_133502.1	ZNF274	NP_598009.1	ILMN_1714274	0002370021	I	643	GTGGTATCTCAGTTAGAGGAGGCAGAAGATTTCTGGCCAGTGGAGAGAGG	19	+	58698337-58698386	19q13.43c	Homo sapiens zinc finger protein 274 (ZNF274), transcript variant ZNF274c, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10777669] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10520746] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10777669] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10777669] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZKSCAN19; DKFZp686K08243; FLJ37843; HFB101; ZF2	ZKSCAN19; DKFZp686K08243; FLJ37843; HFB101; ZF2
Homo sapiens	RefSeq	XR_037785.1	ILMN_337370	LOC100132795	XR_037785.1	XR_037785.1		100132795	169204645	XR_037785.1	LOC100132795		ILMN_3201986	0005090326	A	56	AGTCATCCCAAATCCAGGTTCATCTGACACCAGCCGCCTCCACCATGCCA				12p11.21a	PREDICTED: Homo sapiens misc_RNA (LOC100132795), miscRNA.					
Homo sapiens	RefSeq	NM_199168.2	ILMN_4631	CXCL12	NM_199168.2	NM_199168.2		6387	76563931	NM_199168.2	CXCL12	NP_954637.1	ILMN_1791447	0004560020	I	1411	CAGTGAATAAACCATCATCTTGCCACTACCCCCTCCTGAAGCCACAGCAG	10	-	44872979-44873028	10q11.21c	Homo sapiens chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) (CXCL12), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 10772939] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10620615] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10802710] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10198043] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10491003] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8752280] [evidence TAS]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 10772939] [evidence TAS]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [pmid 10570282] [evidence TAS]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 10772939] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10802710] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10491003] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10772939] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	SDF1A; TPAR1; SDF1; SDF1B; SCYB12; TLSF-b; SDF-1b; TLSF-a; PBSF; SDF-1a	SDF1A; TPAR1; SDF1; SDF1B; SCYB12; TLSF-b; SDF-1b; TLSF-a; PBSF; SDF-1a
Homo sapiens	RefSeq	NM_001166.3	ILMN_23760	BIRC2	NM_001166.3	NM_001166.3		329	41349435	NM_001166.3	BIRC2	NP_001157.1	ILMN_2182704	0000840280	S	3606	CCAGGAACTCTGGAGTTCATCAGAGTTATGGTGCCGAATTGTCTTTGGTG	11	+	101754474-101754523	11q22.2a	Homo sapiens baculoviral IAP repeat-containing 2 (BIRC2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11106668] [evidence EXP]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8548810] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11084335] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16282325] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022362] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11084335] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	API1; Hiap-2; MIHB; RNF48; HIAP2; cIAP1	API1; Hiap-2; MIHB; RNF48; HIAP2; cIAP1
Homo sapiens	RefSeq	NM_001166.3	ILMN_23760	BIRC2	NM_001166.3	NM_001166.3		329	41349435	NM_001166.3	BIRC2	NP_001157.1	ILMN_1768194	0004920707	S	2037	GACCTGGAGATAGGGTAGCCTGCTTTGCCTGTGGTGGGAAGCTCAGTAAC	11	+	101726433-101726482	11q22.2a	Homo sapiens baculoviral IAP repeat-containing 2 (BIRC2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11106668] [evidence EXP]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8548810] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11084335] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16282325] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022362] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11084335] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	API1; Hiap-2; MIHB; RNF48; HIAP2; cIAP1	API1; Hiap-2; MIHB; RNF48; HIAP2; cIAP1
Homo sapiens	Unigene	Hs.577963	ILMN_130144	HS.577963	Hs.577963		Hs.577963		8471341	BE081038			ILMN_1912106	0004230202	S	303	GGCTTATCTACTGGGAACACTTCATAATAATCTGTGGAGGCTGTCCAGGA					QV1-BT0631-030400-130-e02 BT0631 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_001716939.1	ILMN_349389	LOC100133165	XM_001716939.1	XM_001716939.1		100133165	169208507	XM_001716939.1	LOC100133165	XP_001716991.1	ILMN_3246988	0001190767	S	200	TGCGTTTCAGTTTTGAACATAAAGCAGTGGCTCTGAGCGCGACCCGGAGG	15	-	20710052-20710101	15q11.2c	PREDICTED: Homo sapiens hypothetical protein LOC100133165 (LOC100133165), mRNA.					
Homo sapiens	RefSeq	NM_001013658.1	ILMN_166258	C16ORF38	NM_001013658.1	NM_001013658.1		390667	61966762	NM_001013658.1	C16orf38	NP_001013680.1	ILMN_3248631	0000870612	S	1319	GGAAAGAGTTCCCGACAGGTGCCATCCTGACGCTGGCCAATGCTGCACTA	16	-	1535993-1536042	16p13.3e	Homo sapiens chromosome 16 open reading frame 38 (C16orf38), mRNA.					
Homo sapiens	RefSeq	NM_001013658.1	ILMN_166258	C16ORF38	NM_001013658.1	NM_001013658.1		390667	61966762	NM_001013658.1	C16orf38	NP_001013680.1	ILMN_1799100	0005890382	S	1198	CAGGAACAAGACAGCGTGGGGGGCGGATTCGACAGCTCCGAGGCCTTCGT	16	-	1536114-1536163	16p13.3e	Homo sapiens chromosome 16 open reading frame 38 (C16orf38), mRNA.					
Homo sapiens	Unigene	Hs.461694	ILMN_94364	HS.461694	Hs.461694		Hs.461694		3306767	AI051233			ILMN_1851487	0000240403	S	240	CTTTTCCTCTCGGCGTGTTTGTGGTTTCATCTCAGTGTGTCCAGGCTCGG	16	+	86472893-86472942		oy90c06.x1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:1673098 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014382.2	ILMN_16216	ATP2C1	NM_014382.2	NM_014382.2		27032	48762684	NM_014382.2	ATP2C1	NP_055197.2	ILMN_1696568	0000780367	I	4400	TCTTTGAGTCATTGTTACTGAGGCAGTTGAGTGTAAGGAGCTGGCTGCAG	3	+	130721654-130721703	3q22.1a	Homo sapiens ATPase, Ca++ transporting, type 2C, member 1 (ATP2C1), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 12804581] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12707275] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11741891] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 14632183] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10615129] [evidence NAS]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 12707275] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 16192278] [evidence IDA]; The directed movement of manganese (Mn) ions into, out of, within or between cells [goid 6828] [pmid 12707275] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 12707275] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 10615129] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 14632182] [evidence IMP]; The regulation of the levels, transport, and metabolism of manganese ions within a cell or between a cell and its external environment [goid 30026] [pmid 12707275] [evidence IDA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [pmid 14632182] [evidence IMP]; The regulation of the levels, transport, and metabolism of calcium ions within the Golgi apparatus of a cell or between the Golgi and its surroundings [goid 32468] [pmid 14632183] [evidence IMP]; The directed movement of calcium ions (Ca2+) into, out of or within the Golgi apparatus [goid 32472] [pmid 14632183] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 16192278] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 10615129] [evidence IMP]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 12810057] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 16192278] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 12707275] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 16192278] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 16192278] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 12707275] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12707275] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16192278] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Mn2+(out) = ADP + phosphate + Mn2+(in) [goid 15410] [pmid 12707275] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 12707275] [evidence IDA]	SPCA1; PMR1; HHD; hSPCA1; ATP2C1A; KIAA1347; BCPM	SPCA1; PMR1; HHD; hSPCA1; ATP2C1A; KIAA1347; BCPM
Homo sapiens	RefSeq	NM_170662.3	ILMN_18286	CBLB	NM_170662.3	NM_170662.3		868	54112419	NM_170662.3	CBLB	NP_733762.2	ILMN_1685580	0005270132	S	3661	GCGTGGTCAGGTCTGCTGTAACATTTCCCACCAACTCTCTTGCTGTCCAC	3	-	106860064-106860113	3q13.11c-q13.11d	Homo sapiens Cas-Br-M (murine) ecotropic retroviral transforming sequence b (CBLB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane [goid 6607] [pmid 7784085] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7784085] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 7784085] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	DKFZp779F1443; FLJ41152; DKFZp779A0729; FLJ36865; RNF56; Nbla00127; DKFZp686J10223	DKFZp779F1443; FLJ41152; DKFZp779A0729; FLJ36865; RNF56; Nbla00127; DKFZp686J10223
Homo sapiens	Unigene	Hs.550371	ILMN_110282	HS.550371	Hs.550371		Hs.550371		7702714	AW770669			ILMN_1888570	0006520398	S	159	GGGCTTCATGATGCTATGGGGAGGAACGGGAAATGATTACGGAACAAGTG	1	-	212196699-212196748		hl88e09.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3009064 3, mRNA sequence					
Homo sapiens	RefSeq	NM_032410.2	ILMN_8484	HOOK3	NM_032410.2	NM_032410.2		84376	33356164	NM_032410.2	HOOK3	NP_115786.1	ILMN_1741464	0003440241	S	2921	GAATACATTGGCAGAGGTGCTAATCACATCTTCCCTAAGGCACCTGGAAG	8	+	42993320-42993369	8p11.21a	Homo sapiens hook homolog 3 (Drosophila) (HOOK3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [pmid 11238449] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [pmid 11238449] [evidence IMP]; Any process by which the Golgi is transported to, and/or maintained in, a specific location within the cell [goid 51645] [pmid 11238449] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17237231] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 11238449] [evidence IDA]	HK3	HK3
Homo sapiens	RefSeq	NM_004672.3	ILMN_20318	MAP3K6	NM_004672.3	NM_004672.3		9064	45827808	NM_004672.3	MAP3K6	NP_004663.3	ILMN_1694539	0005080471	S	4158	GGATGAATGGAGAGGACAAAGGCAGCTTCTGACACACCAGCCCCAGGACC	1	-	27681790-27681839	1p36.11a	Homo sapiens mitogen-activated protein kinase kinase kinase 6 (MAP3K6), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9875215] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9875215] [evidence TAS]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 9875215] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9875215] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [pmid 9875215] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9875215] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC125653; MGC20114; ASK2; MAPKKK6	MGC125653; MGC20114; ASK2; MAPKKK6
Homo sapiens	RefSeq	NM_173642.1	ILMN_12396	FAM80A	NM_173642.2	NM_173642.2		284716	141803033	NM_173642.2	FAM80A	NP_775913.1	ILMN_1706664	0006840619	S	1230	GGCCCCACCCTCCATGCTGCCCGAACCTGGCTACAACATTAACAACAGGA	1	+	42653157-42653206	1p34.2b	Homo sapiens family with sequence similarity 80, member A (FAM80A), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP11-157D18.1; MGC47816	RP11-157D18.1; MGC47816
Homo sapiens	RefSeq	NM_133372.1	ILMN_30240	FNIP1	NM_001008738.2	NM_001008738.2		96459	120953263	NM_001008738.2	FNIP1	NP_001008738.2	ILMN_1737343	0002450563	A	5877	GGATTCCTGAGTTACTGTTTTGTTCCTCCCCACTGCTTCCCATTCCTGAG	5	-	131007827-131007876	5q31.1a	Homo sapiens folliculin interacting protein 1 (FNIP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			DKFZp781P0215; KIAA1961; MGC667; DKFZp686E18167	MGC667; DKFZp686E18167
Homo sapiens	RefSeq	XM_371466.3	ILMN_42370	LOC388900	XM_371466.3	XM_371466.3		388900	89058993	XM_371466.3	LOC388900	XP_371466.3	ILMN_1733341	0000290598	A	458	CCGTCGGCCAACAGCCTGGCAATTGAGAGATTTGAGTTGGAGAAGAAGGC	22	-	37365643-37365675:37371514-37371530		PREDICTED: Homo sapiens hypothetical LOC388900 (LOC388900), mRNA.					
Homo sapiens	RefSeq	NM_015102.2	ILMN_17800	NPHP4	NM_015102.2	NM_015102.2		261734	34304361	NM_015102.2	NPHP4	NP_055917.1	ILMN_2219512	0006280019	S	4646	ACTTCAGTGCCCACCTGGCTGACCTGTGCACTTGGCTGAGGAAGCAGAGA	1	-	5930860-5930898:5933312-5933322	1p36.31b	Homo sapiens nephronophthisis 4 (NPHP4), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 12006559] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 12244321] [evidence NAS]; The actions or reactions of an organism in response to a visual stimulus [goid 7632] [pmid 12205563] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 12006559] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 12006559] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 12006559] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244321] [evidence IPI]	KIAA0673; SLSN4	KIAA0673; SLSN4
Homo sapiens	RefSeq	NM_015102.2	ILMN_17800	NPHP4	NM_015102.2	NM_015102.2		261734	34304361	NM_015102.2	NPHP4	NP_055917.1	ILMN_1808417	0004070048	S	4515	GAGGCATTTTGCGTGAAGGTCATCTACCAGTGAGGGCTTGAGGGTGACGT	1	-	5934539-5934588	1p36.31b	Homo sapiens nephronophthisis 4 (NPHP4), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 12006559] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 12244321] [evidence NAS]; The actions or reactions of an organism in response to a visual stimulus [goid 7632] [pmid 12205563] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 12006559] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 12006559] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 12006559] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244321] [evidence IPI]	KIAA0673; SLSN4	KIAA0673; SLSN4
Homo sapiens	RefSeq	NM_006986.3	ILMN_29451	MAGED1	NM_006986.3	NM_006986.3		9500	52632376	NM_006986.3	MAGED1	NP_008917.3	ILMN_2306189	0003800600	A	2291	GTGTCTGGGCCCTGGAGCTGGGATGACATTGAGTTTGAGCTGCTGACCTG	X	+	51644790-51644839	Xp11.22b	Homo sapiens melanoma antigen family D, 1 (MAGED1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 15930293] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 15930293] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [pmid 15930293] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15930293] [evidence IPI]	NRAGE; DLXIN-1	NRAGE; DLXIN-1
Homo sapiens	Unigene	Hs.203340	ILMN_81828	HS.203340	Hs.203340		Hs.203340		5396551	AI809985			ILMN_1835454	0001440240	S	440	GCCCTCTCTCCTACTGCCCACAGCCCACAAAAGCTGTGACATGTTGAGGC	11	+	45897641-45897690		wf64d10.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2360371 3, mRNA sequence					
Homo sapiens	RefSeq	XM_945799.3	ILMN_41066	LOC389342	XM_945799.3	XM_945799.3		389342	169168079	XM_945799.3	LOC389342	XP_950892.1	ILMN_3280565	0005090484	M	121	CCTAAAAGATATATGCGCTCTTTCCCTTCGGTGTGCCACTGAAGATCCTG				5q35.1a	PREDICTED: Homo sapiens similar to QM protein, transcript variant 11 (LOC389342), mRNA.					
Homo sapiens	RefSeq	NM_006835.2	ILMN_22215	CCNI	NM_006835.2	NM_006835.2		10983	17738314	NM_006835.2	CCNI	NP_006826.1	ILMN_1691942	0005810605	S	1628	GAGGGACATGCTTCCCCTTGTCCACCTTTGCAGCCTGTTTCTGTCATGTA	4	-	78188396-78188445	4q21.1b	Homo sapiens cyclin I (CCNI), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9705831] [evidence NAS]		CYC1; CYI	CYC1; CYI
Homo sapiens	RefSeq	XM_940996.1	ILMN_44099	LOC651774	XM_940996.1	XM_940996.1		651774	89062149	XM_940996.1	LOC651774	XP_946089.1	ILMN_1767537	0004150709	S	142	GAGAGTCAGACAACCCCAAATCGAGGATATTACGCAGAGGAAGTGGCCCC					PREDICTED: Homo sapiens similar to T-box 20 isoform a (LOC651774), mRNA.					
Homo sapiens	RefSeq	NM_004588.3	ILMN_183287	SCN2B	NM_004588.3	NM_004588.3		6327	56699490	NM_004588.3	SCN2B	NP_004579.1	ILMN_1676998	0004540301	S	4486	GCTGTGCCTCTTGCTGGCGTCTTCCTTTATTGAAGCTTGCTGATGCACTG	11	-	117539114-117539163	11q23.3d	Homo sapiens sodium channel, voltage-gated, type II, beta (SCN2B), mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [pmid 9295116] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 9295116] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9295116] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 9295116] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Homo sapiens	RefSeq	NM_002913.3	ILMN_179656	RFC1	NM_002913.3	NM_002913.3		5981	32528305	NM_002913.3	RFC1	NP_002904.3	ILMN_2217935	0006290110	S	4582	TGGGTTATTCCTATAACTGTATGTGTTGAGTGGCCGTGAGGCTATGGACC	4	-	39289327-39289376	4p14c	Homo sapiens replication factor C (activator 1) 1, 145kDa (RFC1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [pmid 9488738] [evidence IDA]	The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 8248204] [evidence TAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 8954124] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16438930] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8248204] [evidence TAS]; Increases the activity of an enzyme [goid 8047] [pmid 8954124] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RECC1; RFC140; PO-GA; MHCBFB; MGC51786; A1; RFC	RFC140; A1; RECC1; PO-GA; MHCBFB; MGC51786; RFC
Homo sapiens	RefSeq	NM_006052.1	ILMN_19785	DSCR3	NM_006052.1	NM_006052.1		10311	5174424	NM_006052.1	DSCR3	NP_006043.1	ILMN_1717099	0007320437	S	2831	TGGCCAAAACAGGCTCAGGCCAAAGACCTCCCAAGCTGTATGTACTTCCA	21	-	38596096-38596145	21q22.13a	Homo sapiens Down syndrome critical region gene 3 (DSCR3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]; A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]; A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]; A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]	The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]; The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]; The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DCRA; MGC117385; DSCRA	DCRA; MGC117385; DSCRA
Homo sapiens	RefSeq	NM_001001991.1	ILMN_29207	PAMR1	NM_015430.2	NM_015430.2		25891	50659097	NM_015430.2	PAMR1	NP_056245.2	ILMN_1658356	0007320669	A	2659	CCAGGGCAGCAGAGCTGGGATGTGGTGCATGCCTTTGTGTACATGGCCAC	11	-	35453874-35453903:35453904-35453923	11p13b-p13a	Homo sapiens peptidase domain containing associated with muscle regeneration 1 (PAMR1), transcript variant 1, mRNA.				RAMP; FP938	RAMP; FP938
Homo sapiens	RefSeq	NM_015430.2	ILMN_29207	PAMR1	NM_015430.2	NM_015430.2		25891	50659097	NM_015430.2	PAMR1	NP_056245.2	ILMN_1788410	0005670543	I	865	TCTGGAGGCTGGGAAGTCCAAGATCAAGGCGTCAGAAGATTCATTGTCTG	11	-	35489613-35489656:35492149-35492154	11p13b-p13a	Homo sapiens peptidase domain containing associated with muscle regeneration 1 (PAMR1), transcript variant 1, mRNA.				RAMP; FP938	RAMP; FP938
Homo sapiens	RefSeq	NM_001017391.1	ILMN_20533	SULT1A4	NM_001017391.1	NM_001017391.1		445329	62868226	NM_001017391.1	SULT1A4	NP_001017391.1	ILMN_2336130	0000270347	A	524	CCGAAACCCAAAGGACGTGGCGGTCTCCTACTACCATTTCCACCGTATGG	16	+	29382181-29382230	16p11.2d	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4 (SULT1A4), transcript variant 3, mRNA.					
Homo sapiens	RefSeq	NM_001017391.1	ILMN_20533	SULT1A4	NM_001017391.1	NM_001017391.1		445329	62868226	NM_001017391.1	SULT1A4	NP_001017391.1	ILMN_2336133	0005490594	A	740	AAGGGAGATTCAAAAGATCCTGGAGTTTGTGGGGCGCTCCCTGCCAGAGG	16	+	29382990-29383039	16p11.2d	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4 (SULT1A4), transcript variant 3, mRNA.					
Homo sapiens	RefSeq	XM_928870.1	ILMN_37955	LOC51145	XM_928870.1	XM_928870.1		51145	89029994	XM_928870.1	LOC51145	XP_933963.1	ILMN_1682607	0005570707	A	1751	GCCAAAAGGCGCAGGAGCAAGCGGTCAACCTTTCATAATTCTCCAACGCT	9	-	127546994-127547043	9q33.3a	PREDICTED: Homo sapiens erythrocyte transmembrane protein (LOC51145), mRNA.					
Homo sapiens	RefSeq	NM_001005337.1	ILMN_16551	PKP1	NM_001005337.1	NM_001005337.1		5317	53729343	NM_001005337.1	PKP1	NP_001005337.1	ILMN_1663454	0005220181	A	5106	GGGGACCCAAGAGGCAGTGTTGCTGTCTGCATGTCCACCTTGGAATCTGG	1	+	199568466-199568515	1q32.1c	Homo sapiens plakophilin 1 (ectodermal dysplasia/skin fragility syndrome) (PKP1), transcript variant 1a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9369526] [evidence NAS]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 7527055] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [pmid 7527055] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10852826] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7527055] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9326952] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 7527055] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space [goid 19215] [pmid 10852826] [evidence NAS]; The action of a molecule that contributes to the structural integrity of an epidermal cutaneous structure [goid 30280] [pmid 7527055] [evidence NAS]	B6P; MGC138829	B6P; MGC138829
Homo sapiens	Unigene	Hs.548302	ILMN_109822	HS.548302	Hs.548302		Hs.548302		34322219	AU253506			ILMN_1861091	0004220348	S	348	GTCGCTGGAATCAAAGATGCAGAAGTCACAGTCTCTGGTCTCGAGGAGCA	8	-	8927859-8927908		AU253506 human favorable neuroblastoma cDNA Homo sapiens cDNA clone Nbla04221 3, mRNA sequence					
Homo sapiens	RefSeq	XM_938531.1	ILMN_34645	LOC649452	XM_938531.1	XM_938531.1		649452	88988393	XM_938531.1	LOC649452	XP_943624.1	ILMN_1680042	0004560162	S	2	TGCATATGAATGCCCTGGTGAAGGGTAATGCTCTGGAAGGATATGGCACA					PREDICTED: Homo sapiens hypothetical protein LOC649452 (LOC649452), mRNA.					
Homo sapiens	RefSeq	NM_182501.2	ILMN_177933	MTERFD2	NM_182501.2	NM_182501.2		130916	42740902	NM_182501.2	MTERFD2	NP_872307.2	ILMN_1689899	0002760669	S	4080	GCATCCCATAGCACCCCGCCCTTGCCCCATCACCCTGTGGGCTACATGCA	2	-	241675595-241675644	2q37.3f	Homo sapiens MTERF domain containing 2 (MTERFD2), mRNA.				FLJ16261; MGC61716	FLJ16261; MGC61716
Homo sapiens	RefSeq	XM_927072.1	ILMN_45516	LOC653362	XM_927072.1	XM_927072.1		653362	89057896	XM_927072.1	LOC653362	XP_932165.1	ILMN_1681389	0006550278	S	246	GAAACTATATAAATGCAATGAATGTGAGAAAACCTTCTGTGTGAAATCAA	20	-	44518317-44518366		PREDICTED: Homo sapiens similar to zinc finger protein 248 (LOC653362), mRNA.					
Homo sapiens	RefSeq	XM_001721172.1	ILMN_336422	FABP5L2	XM_001721172.1	XM_001721172.1		729163	169206156	XM_001721172.1	FABP5L2	XP_001721224.1	ILMN_3178258	0004540475	A	163	GGGCGCAATGGCCAAGCCAGATTGTATCATCACTTGTGATGGCAGAAACC				13q14.3d	PREDICTED: Homo sapiens fatty acid binding protein 5-like 2 (FABP5L2), mRNA.					
Homo sapiens	RefSeq	XM_940217.1	ILMN_31610	LOC441135	XM_940217.1	XM_940217.1		441135	88999059	XM_940217.1	LOC441135	XP_945310.1	ILMN_1684730	0000290100	A	3277	AGCCCCACCTCTGGAGCTTTCAGCATTGGAGCATTGCCTAGTGGGACCAC					PREDICTED: Homo sapiens similar to Nuclear envelope pore membrane protein POM 121 (Pore membrane protein of 121 kDa) (P145) (LOC441135), mRNA.					
Homo sapiens	RefSeq	NM_004707.2	ILMN_164969	ATG12	NM_004707.2	NM_004707.2		9140	38261968	NM_004707.2	ATG12	NP_004698.2	ILMN_1673898	0005720142	S	1801	AAAATTATTAGGCTGCAGAGGCAAGAGGATCCCCTGAGCCCAGAAGTTCA	5	-	115194222-115194271	5q22.3b-q23.1a	Homo sapiens ATG12 autophagy related 12 homolog (S. cerevisiae) (ATG12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence ISS]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9852036] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11825910] [evidence IPI]	APG12L; HAPG12; APG12	HAPG12; APG12L; APG12
Homo sapiens	RefSeq	NM_004707.2	ILMN_164969	ATG12	NM_004707.2	NM_004707.2		9140	38261968	NM_004707.2	ATG12	NP_004698.2	ILMN_2188204	0001410348	S	1861	GAGTCGTGATTGTACCACTGCATTCCTGCTGAGCAACAGAGTGAGACCCC	5	-	115194162-115194211	5q22.3b-q23.1a	Homo sapiens ATG12 autophagy related 12 homolog (S. cerevisiae) (ATG12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence ISS]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9852036] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11825910] [evidence IPI]	APG12L; HAPG12; APG12	HAPG12; APG12L; APG12
Homo sapiens	RefSeq	NM_001014342.1	ILMN_29803	FLG2	NM_001014342.2	NM_001014342.2		388698	148539589	NM_001014342.2	FLG2	NP_001014364.1	ILMN_1743715	0001980458	S	8069	GAGGCTCTGAGGCCAGCGGTTACCATACAAAGGAAAGAACAGGCTCTGGT	1	-	152322216-152322265	1q21.3b	Homo sapiens filaggrin family member 2 (FLG2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	IFPS	
Homo sapiens	Unigene	Hs.582765	ILMN_134946	HS.582765	Hs.582765		Hs.582765		83132454	DB304592			ILMN_1863639	0007560411	S	55	CAAAGTAGCCAATGGGAACCTGCAGCATAATCCAGAGCACCTGGCTCTCC	6	+	69377586-69377635		DB304592 BRAWH3 Homo sapiens cDNA clone BRAWH3003753 3, mRNA sequence					
Homo sapiens	Unigene	Hs.579714	ILMN_131895	HS.579714	Hs.579714		Hs.579714		83097848	DB113396			ILMN_1862399	0001990392	S	370	ACCAGTTACCATGGGGCTCTCTAGAAGGGGTCCAGCACACAGGCAGTTGG	19	-	33499609-33499630:33500018-33500045		DB113396 THYMU2 Homo sapiens cDNA clone THYMU2018007 5, mRNA sequence					
Homo sapiens	RefSeq	NR_024345.1	ILMN_371468	C12ORF27	NR_024345.1	NR_024345.1		283460	211064492	NR_024345.1	C12orf27		ILMN_3245684	0001050139	S	1992	GCCGGTGAGCTCTAAAGACAAAAGGACCTGGGTCTGCATTTCCCAAAGGC	12	-	121408054-121408103	12q24.31a	Homo sapiens chromosome 12 open reading frame 27 (C12orf27), non-coding RNA.					
Homo sapiens	RefSeq	NM_015338.3	ILMN_183479	ASXL1	NM_015338.4	NM_015338.4		171023	91199555	NM_015338.4	ASXL1	NP_056153.2	ILMN_1726025	0005390180	S	6553	GCTCCTGCCTCTCTCCCAACATGTTTCCAGCAAGTAGATGCCCCTGTGTG	20	+	30490303-30490352	20q11.21b-q11.21c	Homo sapiens additional sex combs like 1 (Drosophila) (ASXL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC71111; KIAA0978; MGC117280	MGC71111; KIAA0978; MGC117280
Homo sapiens	Unigene	Hs.574958	ILMN_127139	HS.574958	Hs.574958		Hs.574958		7375564	AW628684			ILMN_1889852	0003870546	S	58	GGGAAGGCAGATGCTTGGGTGACATTGCAGGGTGTGTTTCCTCTAAGTGG					hi42e06.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2974978 3, mRNA sequence					
Homo sapiens	RefSeq	XM_928154.1	ILMN_30982	LOC645123	XM_928154.1	XM_928154.1		645123	89031327	XM_928154.1	LOC645123	XP_933247.1	ILMN_1735416	0004730414	S	144	CCACAATGGAGGCACGGAAGAGTGTGCGTGGAATATAGCAGATCCCTTAG	10	+	66321963-66322012		PREDICTED: Homo sapiens hypothetical protein LOC645123 (LOC645123), mRNA.					
Homo sapiens	RefSeq	NM_004369.2	ILMN_178962	COL6A3	NM_004369.2	NM_004369.2		1293	55743097	NM_004369.2	COL6A3	NP_004360.2	ILMN_2307861	0002470114	A	10062	CCTATCAATCCAAATTCCCTCTGGAGTTTCATGTTATGCCTGTTGCAGGC	2	-	237897833-237897882	2q37.3b	Homo sapiens collagen, type VI, alpha 3 (COL6A3), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A collagen heterotrimer containing type VI alpha chains in alpha1(VI)alpha2(VI)alpha3(VI) trimers; type VI collagen triple helices associate to form beaded fibrils [goid 5589] [pmid 8782832] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8782832] [evidence TAS]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp686K04147; FLJ34702; DKFZp686D23123	DKFZp686K04147; FLJ34702; DKFZp686D23123
Homo sapiens	RefSeq	NM_018714.1	ILMN_19673	COG1	NM_018714.2	NM_018714.2		9382	82546870	NM_018714.2	COG1	NP_061184.1	ILMN_1791873	0005310259	S	2670	GGTGACTGGTACAGAGAATCAGCTCGCCCCCCGGAGCAGTACGTTCAACT	17	+	68714456-68714505	17q25.1a	Homo sapiens component of oligomeric golgi complex 1 (COG1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11980916] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p) [goid 17119] [pmid 15047703] [evidence IDA]; A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p) [goid 17119] [pmid 11980916] [evidence NAS]	The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 11980916] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [pmid 11980916] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15047703] [evidence IPI]	LDLB; KIAA1381; DKFZp762L1710; CDG2G	LDLB; KIAA1381; DKFZP762L1710
Homo sapiens	RefSeq	NM_052942.2	ILMN_24462	GBP5	NM_052942.2	NM_052942.2		115362	31377630	NM_052942.2	GBP5	NP_443174.1	ILMN_2114568	0001510364	S	2153	GCAGGAACAACAGATGCAGGAACAGGCTGCACAGCTCAGCACAACATTCC	1	-	89499057-89499088:89500491-89500508	1p22.2c	Homo sapiens guanylate binding protein 5 (GBP5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	GBP-5	GBP-5
Homo sapiens	Unigene	Hs.546661	ILMN_109395	HS.546661	Hs.546661		Hs.546661		47300776	CN284362			ILMN_1901887	0006060041	S	176	GCAGGCTCCTGGAGGACTTCCTGAGGAATCACCATTATGCAGTCAGCAGG	1	+	110826968-110827017		17000531371753 GRN_EB Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NM_005442.2	ILMN_19998	EOMES	NM_005442.2	NM_005442.2		8320	22538469	NM_005442.2	EOMES	NP_005433.2	ILMN_1760509	0007320372	S	2643	GTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTGCTGTGTGCTGGG	3	-	27757929-27757978	3p24.1c	Homo sapiens eomesodermin homolog (Xenopus laevis) (EOMES), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9888994] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	TBR2	TBR2
Homo sapiens	RefSeq	XM_929931.3	ILMN_42235	RGPD3	XM_929931.3	XM_929931.3		653489	169163107	XM_929931.3	RGPD3	XP_935024.2	ILMN_3246123	0001240431	S	5157	TCAAGAGCAAGAGGTGTCTGCAGCTAACGTGGAACACTTGAAGAACGTCT	2	-	106396088-106396137	2q12.2b	PREDICTED: Homo sapiens RANBP2-like and GRIP domain containing 3, transcript variant 1 (RGPD3), mRNA.		The directed movement of substances within a cell [goid 46907] [evidence IEA]			
Homo sapiens	RefSeq	NR_031644.1	ILMN_388719	MIR548F3	NR_031644.1	NR_031644.1		100302159	269847246	NR_031644.1	MIR548F3		ILMN_3310241	0004040333	S	3	AGGTTGGTGCAAACCTAATTGCAATTTTTGCAGTTTTTTTAAGTAATTGC					Homo sapiens microRNA 548f-3 (MIR548F3), microRNA.					
Homo sapiens	RefSeq	XR_038655.1	ILMN_337034	LOC642546	XR_038655.1	XR_038655.1		642546	169216309	XR_038655.1	LOC642546		ILMN_3201556	0001740152	A	2806	TGAGAGTGACTGCCTGGCCCTGCTGCAACACTTAGGGCTTGAGAGCACCT				Xq21.1c	PREDICTED: Homo sapiens misc_RNA (LOC642546), miscRNA.					
Homo sapiens	Unigene	Hs.555595	ILMN_112331	HS.555595	Hs.555595		Hs.555595		307192	L19369			ILMN_1847979	0003290440	S	3	GGGGTCAGAGGCCAGGGAAAGAGGCACCAAGGGGATTAAAGGTGACCATG					Human (clone xip8) mRNA sequence					
Homo sapiens	RefSeq	NM_207521.1	ILMN_20551	RTN4	NM_207521.1	NM_207521.1		57142	47519561	NM_207521.1	RTN4	NP_997404.1	ILMN_1693598	0001580047	I	13	AGCTGGCCGAGTGGAAAACGTCCACATTGACCCAACCGCAGTGAAGGGAG	2	-	55276264-55276313	2p16.1d	Homo sapiens reticulon 4 (RTN4), transcript variant 5, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 11126360] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11126360] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 10667797] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [pmid 11126360] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [pmid 15034570] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [pmid 10667797] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 11126360] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11126360] [evidence IPI]	RTN4-B1; Nbla10545; RTN-X; Nogo-C; NSP; ASY; RTN4-A; NSP-CL; NOGOC; Nbla00271; NI220/250; RTN4-C; RTN4-B2; NOGO-A; Nogo-B; NOGO	RTN4-B1; Nbla10545; RTN-X; Nogo-C; NSP; ASY; RTN4-A; NSP-CL; NOGOC; Nbla00271; NI220/250; RTN4-C; RTN4-B2; NOGO-A; Nogo-B; NOGO
Homo sapiens	RefSeq	XM_001713795.1	ILMN_343690	LOC100133473	XM_001713795.1	XM_001713795.1		100133473	169218214	XM_001713795.1	LOC100133473	XP_001713847.1	ILMN_3242638	0002070192	S	1145	CCAGCTCGCCATACACCTGCACAACGCCATGACCACCCGCAAGAAGGAAA					PREDICTED: Homo sapiens hypothetical protein LOC100133473 (LOC100133473), mRNA.					
Homo sapiens	RefSeq	XM_927001.1	ILMN_41125	LOC643702	XM_927001.1	XM_927001.1		643702	88982392	XM_927001.1	LOC643702	XP_932094.1	ILMN_1736468	0003710228	S	373	CCGTCCAGATGGCAGCTCAGGTCTTCCCGTTGCTTTCAGTCATCCACCCA	5	-	820347-820396		PREDICTED: Homo sapiens similar to bromodomain containing 9 isoform 1 (LOC643702), mRNA.					
Homo sapiens	RefSeq	NM_030934.3	ILMN_163506	C1ORF25	NM_030934.3	NM_030934.3		81627	30181237	NM_030934.3	C1orf25	NP_112196.2	ILMN_1665300	0004890647	S	2310	TACAGCACCCCCACCTACACTGGAGGACAGTCAGAAAGCCATGTCCAGTC	1	-	183355855-183355904	1q25.3g	Homo sapiens chromosome 1 open reading frame 25 (C1orf25), mRNA.				MST070; bG120K12.3; MSTP070; MGC25112; MGC57134	bG120K12.3; MST070; MSTP070; MGC25112; MGC57134
Homo sapiens	RefSeq	NM_030934.3	ILMN_163506	C1ORF25	NM_030934.3	NM_030934.3		81627	30181237	NM_030934.3	C1orf25	NP_112196.2	ILMN_2193498	0002260521	S	4170	GGTAGGCGGTAGTTTAGAACTCTGATCAGGTACTACATCAACCAAAAGAG	1	-	183353995-183354044	1q25.3g	Homo sapiens chromosome 1 open reading frame 25 (C1orf25), mRNA.				MST070; bG120K12.3; MSTP070; MGC25112; MGC57134	MST070; bG120K12.3; MSTP070; MGC25112; MGC57134
Homo sapiens	RefSeq	NM_000401.2	ILMN_16578	EXT2	NM_000401.2	NM_000401.2		2132	46370067	NM_000401.2	EXT2	NP_000392.2	ILMN_1679698	0001980168	I	362	CCTGCGGCATCCCTTGCGGTGCCAGAAGCCGTGGGACGAGTGTCTTTAAT	11	+	44074408-44074447:44081816-44081825	11p11.2e	Homo sapiens exostoses (multiple) 2 (EXT2), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10639137] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 9326317] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [pmid 12907669] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10878610] [evidence TAS]; The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan [goid 15014] [pmid 17761672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate [goid 42328] [pmid 12907669] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12907669] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 12907669] [evidence IPI]; Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]; Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50509] [evidence IEA]	SOTV	SOTV
Homo sapiens	RefSeq	NM_000401.2	ILMN_16578	EXT2	NM_000401.2	NM_000401.2		2132	46370067	NM_000401.2	EXT2	NP_000392.2	ILMN_1761259	0006620682	A	3582	AGGAGTCGCTCTAGCTGGTACCCGTAAAAGTTGTGGGAATTGTGACCCCC	11	+	44176084-44176133	11p11.2e	Homo sapiens exostoses (multiple) 2 (EXT2), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10639137] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 9326317] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [pmid 12907669] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10878610] [evidence TAS]; The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan [goid 15014] [pmid 17761672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate [goid 42328] [pmid 12907669] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12907669] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 12907669] [evidence IPI]; Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]; Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50509] [evidence IEA]	SOTV	SOTV
Homo sapiens	RefSeq	NM_078473.2	ILMN_3643	TM2D2	NM_078473.2	NM_078473.2		83877	66932891	NM_078473.2	TM2D2	NP_510882.1	ILMN_1741171	0000110711	A	2966	TGACACCCATCATCCATCTGCCCACAAACCTGGCCAAATGTGATACAACC	8	-	38965720-38965769	8p11.23b	Homo sapiens TM2 domain containing 2 (TM2D2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC125814; BLP1; MGC125813	MGC125814; BLP1; MGC125813
Homo sapiens	RefSeq	NM_207469.1	ILMN_2346	DEFB32	NM_207469.1	NM_207469.1		400830	46409557	NM_207469.1	DEFB32	NP_997352.1	ILMN_1683887	0005340315	S	1150	GCAAGGATGGCATGATGCTGGTGACTCAAACGTGCCTACTCATGGTGTCA	20	+	188766-188815	20p13f	Homo sapiens defensin, beta 32 (DEFB32), mRNA.				UNQ827	UNQ827
Homo sapiens	RefSeq	NM_207469.1	ILMN_2346	DEFB32	NM_207469.1	NM_207469.1		400830	46409557	NM_207469.1	DEFB32	NP_997352.1	ILMN_2058946	0000540088	S	1626	TGACACGTACTGACTTCTATCTGAGAAGAACAAACCAAAACACTCAGGCC	20	+	189242-189291	20p13f	Homo sapiens defensin, beta 32 (DEFB32), mRNA.				UNQ827	UNQ827
Homo sapiens	RefSeq	NM_000020.2	ILMN_171458	ACVRL1	NM_000020.2	NM_000020.2		94	116734711	NM_000020.2	ACVRL1	NP_000011.2	ILMN_3250257	0005910451	A	4165	CGAAATTACACTTCTCGTACCTGGAGACGCTGTTTGTGGGAGCACTGGGC	12	+	50603314-50603363	12q13.13c	Homo sapiens activin A receptor type II-like 1 (ACVRL1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8242742] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 8242742] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 16752392] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12065756] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 12453878] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 15702480] [evidence IDA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 15702480] [evidence IDA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 14684682] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 12453878] [evidence IMP]; Any process that decreases the rate, frequency, or extent of the orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 10596] [pmid 17068149] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 17068149] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [pmid 17068149] [evidence IDA]; The migration of epithelial cells along or through a wound gap to reestablish a continuous epithelium [goid 35313] [pmid 12453878] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 12393874] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of focal adhesion formation, the establishment and maturation of focal adhesions [goid 51895] [pmid 12453878] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12065756] [evidence IDA]; Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals [goid 16361] [pmid 8242742] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 12065756] [evidence IDA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [pmid 8242742] [evidence IDA]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [pmid 8242742] [evidence IPI]	ORW2; HHT; TSR-I; ALK-1; ALK1; SKR3; HHT2; ACVRLK1	ORW2; HHT; TSR-I; ALK-1; ALK1; SKR3; HHT2; ACVRLK1
Homo sapiens	RefSeq	NM_181598.2	ILMN_2195	SPG3A	NM_015915.3	NM_015915.3		51062	74024913	NM_015915.3	SPG3A	NP_056999.2	ILMN_1689251	0000430372	A	1722	CTCTGGAGAATACCGAGAGCTGGGAGCTGTAATAGACCAGGTGGCTGCAG	14	+	50164867-50164916	14q22.1b	Homo sapiens spastic paraplegia 3A (autosomal dominant) (SPG3A), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	SPG3; GBP3; FSP1; AD-FSP; ATL1; atlastin1	SPG3; GBP3; FSP1; AD-FSP; ATL1; atlastin1
Homo sapiens	RefSeq	XR_040021.1	ILMN_343568	C6ORF176	XR_040021.1	XR_040021.1		90632	169169888	XR_040021.1	C6orf176		ILMN_3262909	0005670703	M	862	GAGGGGGATATTCCATCCAACATAGGAACCATGAACTGTACACACAGAGG				6q27b	PREDICTED: Homo sapiens misc_RNA (C6orf176), miscRNA.					
Homo sapiens	RefSeq	XM_938800.1	ILMN_171702	KCNG2	XM_001133163.1	XM_001133163.1		26251	113428002	XM_001133163.1	KCNG2	XP_001133163.1	ILMN_1780373	0000450703	I	497	TCTGTGCCAACAGGCTGCAGACTCCTGAGAAGGTCCCCAGCCCACATCTG				18q23d	PREDICTED: Homo sapiens potassium voltage-gated channel, subfamily G, member 2 (KCNG2), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 10551266] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10551266] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 10551266] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 10551266] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]		
Homo sapiens	RefSeq	NM_213636.1	ILMN_5202	PDLIM7	NM_213636.1	NM_213636.1		9260	47157327	NM_213636.1	PDLIM7	NP_998801.1	ILMN_1690125	0004560164	I	915	CATCTGACACTGCCTTCCCTCTTTGCCCTGTGGTACTGCTGTCTGCCAGG	5	-	176917287-176917336	5q35.3a	Homo sapiens PDZ and LIM domain 7 (enigma) (PDLIM7), transcript variant 4, mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 7929196] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_007374.1	ILMN_29074	SIX6	NM_007374.1	NM_007374.1		4990	6677978	NM_007374.1	SIX6	NP_031400.1	ILMN_1786631	0004260047	S	1104	TGCAAAGTCTCCTTCGGAACCCGAACTGCAAGCTGAGCGCCTGCCCAGAT	14	+	60047991-60048040	14q23.1c	Homo sapiens SIX homeobox 6 (SIX6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10512683] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10512683] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MCOPCT2; OPTX2; Six9	MCOPCT2; OPTX2; Six9
Homo sapiens	RefSeq	NM_030919.1	ILMN_16948	FAM83D	NM_030919.2	NM_030919.2		81610	116235447	NM_030919.2	FAM83D	NP_112181.2	ILMN_1781943	0000150543	S	1895	CCGTGTTCAGACTCCTGGTTTCTTCCAGGCTTACAGTGGACATCATCAGC	20	+	37014583-37014632	20q11.23c	Homo sapiens family with sequence similarity 83, member D (FAM83D), mRNA.				C20orf129; FLJ38341; dJ616B8.3	dJ616B8.3; FAM83D
Homo sapiens	Unigene	Hs.566332	ILMN_118673	HS.566332	Hs.566332		Hs.566332		7377176	AW630386			ILMN_1872974	0001500541	S	81	GAAGCAGCCTGGATAACTCGGGTACCACACAGAGGACAACTGCCCTAGAG	5	+	74307231-74307280		hh82d09.y1 NCI_CGAP_GU1 Homo sapiens cDNA clone IMAGE:2969297 5, mRNA sequence					
Homo sapiens	Unigene	Hs.310040	ILMN_85789	HS.310040	Hs.310040		Hs.310040		20204101	BQ130190			ILMN_1869913	0007650689	S	226	CGCCTCTGGTGGAGAGGAAGAGAAAAGCAGCCAGCGTCGAGGAATCTCTC	5	+	148911643-148911692		ij82b05.y1 Human insulinoma Homo sapiens cDNA clone IMAGE: 5777984 5, mRNA sequence					
Homo sapiens	RefSeq	NM_018473.2	ILMN_27212	THEM2	NM_018473.2	NM_018473.2		55856	40549423	NM_018473.2	THEM2	NP_060943.1	ILMN_2098743	0001580427	S	352	AGAAGAGCATACCAATGCAATAGGCACTCTCCACGGCGGTTTGACAGCCA	6	+	24806143-24806192	6p22.2b	Homo sapiens thioesterase superfamily member 2 (THEM2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HT012; PNAS-27; MGC4961	HT012; PNAS-27; MGC4961
Homo sapiens	Unigene	Hs.379253	ILMN_88678	HS.379253	Hs.379253		Hs.379253		31873797	BX537823			ILMN_1856634	0004050025	S	2471	TGCAAGTCAGGGGCATTTTCCTTGACCCTTGACTGATGCTATGCGGAGAC	1	+	61699408-61699457		Homo sapiens mRNA; cDNA DKFZp686J23256 (from clone DKFZp686J23256)					
Homo sapiens	RefSeq	NM_201627.1	ILMN_24501	TRIM41	NM_201627.1	NM_201627.1		90933	42516573	NM_201627.1	TRIM41	NP_963921.1	ILMN_1729495	0000540239	A	2452	CTCCCAGCCCCTTTCCATGCCTTTCACTCCATTTGGCAAGCTCTGAGGGG	5	+	180595186-180595235	5q35.3g	Homo sapiens tripartite motif-containing 41 (TRIM41), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17893151] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RINCK; MGC31991; MGC1127	RINCK; MGC31991; MGC1127
Homo sapiens	RefSeq	XM_001722112.1	ILMN_342009	LOC100132449	XM_001722112.1	XM_001722112.1		100132449	169208362	XM_001722112.1	LOC100132449	XP_001722164.1	ILMN_3241240	0000580603	S	1386	CATTCAGCCCCTACTTACCTGGGGACCCCGGCTGGGGCACGAGAGTACCA	15	+	85687-85736		PREDICTED: Homo sapiens similar to colon cancer-associated antigen AgSK1-2HT-ECS (LOC100132449), mRNA.					
Homo sapiens	RefSeq	NM_013247.4	ILMN_22612	HTRA2	NM_013247.4	NM_013247.4		27429	73747817	NM_013247.4	HTRA2	NP_037379.1	ILMN_1747204	0001820091	I	1386	AGTCCCTTTGCACTGCAGAACACGATCACATCCGGCATTGTTAGCTCTGC	2	+	74611618-74611667	2p13.1b	Homo sapiens HtrA serine peptidase 2 (HTRA2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10971580] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 15044455] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10995577] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10644717] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10873535] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10971580] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 10873535] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 10644717] [evidence NAS]	PARK13; OMI; PRSS25	PARK13; OMI; PRSS25
Homo sapiens	Unigene	Hs.412361	ILMN_90289	HS.412361	Hs.412361		Hs.412361		4509384	AI559179			ILMN_1915616	0000510392	S	63	ACTGGCCAGGTGCGGTGGCTCTTAGGTTAAGTTGTTAATCAATCTCTACC	2	-	227427157-227427206		tq42f05.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2211489 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014243.1	ILMN_164554	ADAMTS3	NM_014243.1	NM_014243.1		9508	21265036	NM_014243.1	ADAMTS3	NP_055058.1	ILMN_1703803	0002120364	S	5625	GTGCATACATCTCATCCACAGGGGAAGATAAAGATGGTCACACAAACAGT	4	-	73366238-73366287	4q13.3c	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 3 (ADAMTS3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 11812023] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [pmid 11812023] [evidence NAS]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [pmid 11408482] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11812023] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11408482] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	KIAA0366; ADAMTS-4	KIAA0366; ADAMTS-4
Homo sapiens	RefSeq	XR_039212.1	ILMN_338869	LOC100128322	XR_039212.1	XR_039212.1		100128322	169169791	XR_039212.1	LOC100128322		ILMN_3257496	0005340326	M	2359	CACTTCCTCCTGAACTGGAAGGATATCAGTCCCTAAAGCAGAGCTGTCTG				6q23.2a	PREDICTED: Homo sapiens misc_RNA (LOC100128322), miscRNA.					
Homo sapiens	RefSeq	XM_001717222.1	ILMN_335411	C6ORF140	XM_001717222.1	XM_001717222.1		389396	169169051	XM_001717222.1	C6orf140	XP_001717274.1	ILMN_3253523	0002650068	M	833	CCCTCTCAGGGGAACGTCCTGGATGACAACACGGCGTCTATAAGCCTCCT					PREDICTED: Homo sapiens chromosome 6 open reading frame 140 (C6orf140), mRNA.					
Homo sapiens	RefSeq	XM_944170.1	ILMN_46209	LOC650392	XM_944170.1	XM_944170.1		650392	89040615	XM_944170.1	LOC650392	XP_949263.1	ILMN_1800227	0006520114	S	200	CGCCCAGGCCCAGCTCGTCCAGAGTCTGCGGACAGCGCACGTCCAGGTAA					PREDICTED: Homo sapiens hypothetical protein LOC650392 (LOC650392), mRNA.					
Homo sapiens	RefSeq	NM_001004687.1	ILMN_23254	OR2L3	NM_001004687.1	NM_001004687.1		391192	52317197	NM_001004687.1	OR2L3	NP_001004687.1	ILMN_1754846	0003370398	S	885	GGTGATGGGGGCCCTGACACGAGTGAGTCAGAGAATCTGCTCTGGGAAAA	1	+	246291491-246291540	1q44e	Homo sapiens olfactory receptor, family 2, subfamily L, member 3 (OR2L3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	XM_930236.1	ILMN_40357	LOC653496	XM_930236.1	XM_930236.1		653496	88943464	XM_930236.1	LOC653496	XP_935329.1	ILMN_1810953	0004230672	S	53	TCCAGAAGTCCAGAGCTGAGGACTGCCTGTTTGCAGCTAAACAAGCACTG	1	+	147843289-147843324:147943370-147943383		PREDICTED: Homo sapiens similar to hypothetical gene supported by AK123662 (LOC653496), mRNA.					
Homo sapiens	RefSeq	NM_003252.2	ILMN_137729	TIAL1	NM_003252.2	NM_003252.2		7073	13435392	NM_003252.2	TIAL1	NP_003243.1	ILMN_1728589	0002940402	I	10	TCGGCCTTGTCCCGGGATCGCTCCGTCGCACCCACCATGATGGAAGACGA	10	-	121345953-121345967:121345968-121346002	10q26.11d	Homo sapiens TIA1 cytotoxic granule-associated RNA binding protein-like 1 (TIAL1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 1326761] [evidence TAS]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types [goid 17145] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9207209] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 1326761] [evidence TAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 1326761] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9207209] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1326761] [evidence TAS]	TCBP; MGC33401; TIAR	TCBP; MGC33401; TIAR
Homo sapiens	RefSeq	NM_078626.1	ILMN_36950	CDKN2C	NM_078626.2	NM_078626.2		1031	89903019	NM_078626.2	CDKN2C	NP_523240.1	ILMN_1656415	0004920593	I	288	CCAGTCCTTCTGTCAGTCTCCGATGCCATCATGCAGCCTGGTTAGGAGCA	1	+	51208517-51208566	1p33a	Homo sapiens cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) (CDKN2C), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11800646] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11800646] [evidence IDA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 8001816] [evidence IDA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 10208428] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10208428] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 10208428] [evidence IDA]	Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 8001816] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8001816] [evidence IPI]	INK4C; p18-INK4C; p18	INK4C; p18-INK4C; p18
Homo sapiens	RefSeq	XM_925904.1	ILMN_41093	LOC642321	XM_925904.1	XM_925904.1		642321	89058235	XM_925904.1	LOC642321	XP_930997.1	ILMN_1658631	0004220164	S	1347	TCCCCAGACAGCCAGAAGGCCCTTTGCTAGTTTCTTGGTACTTCAGTGGA	21	+	122220-122269		PREDICTED: Homo sapiens hypothetical protein LOC642321 (LOC642321), mRNA.					
Homo sapiens	RefSeq	XM_001719906.1	ILMN_339650	LOC100133298	XM_001719906.1	XM_001719906.1		100133298	169180190	XM_001719906.1	LOC100133298	XP_001719958.1	ILMN_3239361	0003360128	S	2159	GGTGAGCTGAGATTGCACCACTGCACTCAAGACTGGCAATAGAGGGAGAT	9	-	46525140-46525189	9p11.2a	PREDICTED: Homo sapiens hypothetical protein LOC100133298 (LOC100133298), mRNA.					
Homo sapiens	RefSeq	NM_018944.2	ILMN_22929	C21ORF45	NM_018944.2	NM_018944.2		54069	45827699	NM_018944.2	C21orf45	NP_061817.1	ILMN_2171183	0001440273	S	1427	GGAATACTTACCAAAGAGGAGTAACCATCTCTGAGGGTGGGATTCTGGGG	21	-	33640624-33640673	21q22.11b	Homo sapiens chromosome 21 open reading frame 45 (C21orf45), mRNA.				B28; C21orf46; MIS18alpha; FASP1	B28; C21orf46; MIS18alpha; FASP1
Homo sapiens	RefSeq	NM_018944.2	ILMN_22929	C21ORF45	NM_018944.2	NM_018944.2		54069	45827699	NM_018944.2	C21orf45	NP_061817.1	ILMN_1712386	0000160593	S	860	ATTAGCCAGGCATGCGAAACGCTGAGGTGGGAGGATCAGATGAGCTTGGG	21	-	33641191-33641240	21q22.11b	Homo sapiens chromosome 21 open reading frame 45 (C21orf45), mRNA.				B28; C21orf46; MIS18alpha; FASP1	B28; C21orf46; MIS18alpha; FASP1
Homo sapiens	RefSeq	XM_943845.1	ILMN_165095	LOC646869	XM_001132867.1	XM_001132867.1		646869	113419490	XM_001132867.1	LOC646869	XP_001132867.1	ILMN_1674021	0003940465	S	265	CCCCAACACGCTCCCAGCCCCACTGGCGCAGAACCCATCACCGCTTGCCC				7p14.3a	PREDICTED: Homo sapiens hypothetical LOC646869 (LOC646869), mRNA.					
Homo sapiens	RefSeq	NM_016283.4	ILMN_29839	TAF9	NM_001015891.1	NM_001015891.1		6880	62865611	NM_001015891.1	TAF9	NP_001015891.1	ILMN_1778617	0007040537	A	363	CCAGGGGTTGGAAAAACCACACTAGGCAAAGAACTTGCGTCAAAATCAGG	5	-	68698123-68698172	5q13.2a	Homo sapiens TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa (TAF9), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [pmid 14580349] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10821850] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 7597030] [evidence TAS]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 10821850] [evidence TAS]	TAFIID32; MGC3647; MGC:1603; AD-004; MGC:3647; TAF2G; MGC1603; CGI-137; MGC5067; CIP; MGC:5067; AK6; CINAP; TAFII32; TAFII31	TAFIID32; MGC3647; MGC:1603; AD-004; MGC:3647; TAF2G; MGC1603; CGI-137; MGC5067; CIP; MGC:5067; AK6; CINAP; TAFII32; TAFII31
Homo sapiens	RefSeq	NM_178160.1	ILMN_6423	OTOP2	NM_178160.1	NM_178160.1		92736	30039713	NM_178160.1	OTOP2	NP_835454.1	ILMN_1715612	0004050619	S	1661	GGTGGATTTCTACGGCTACTCCCTCTGGGCGGTCATCGTCAACATCTGCC	17	+	70441118-70441167	17q25.1c	Homo sapiens otopetrin 2 (OTOP2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_004334.1	ILMN_26226	BST1	NM_004334.1	NM_004334.1		683	4757873	NM_004334.1	BST1	NP_004325.1	ILMN_1770161	0006270681	S	1081	GTAACTGGAAACTGTGTTGCTCTAACCCTCCTCCAGCCCTGCAGCCTCCC	4	+	15342563-15342566:15342567-15342612	4p15.32d	Homo sapiens bone marrow stromal cell antigen 1 (BST1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [pmid 8202488] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	An immune response mediated through a body fluid [goid 6959] [pmid 8202488] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8202488] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose [goid 3953] [evidence IEA]; Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose [goid 3953] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CD157	CD157
Homo sapiens	RefSeq	NM_004047.2	ILMN_37321	ATP6V0B	NM_004047.3	NM_004047.3		533	86792636	NM_004047.3	ATP6V0B	NP_004038.1	ILMN_1721391	0007160059	S	832	GGCCCTCCCTGCACTCCCCTCTTGCTGCGTGTTGATTTGGAGGCACTGCA	1	+	44216369-44216418	1p34.1f	Homo sapiens ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b (ATP6V0B), transcript variant 1, mRNA.	A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9653649] [evidence TAS]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 9653649] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9653649] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	HATPL; ATP6F; VMA16	HATPL; ATP6F; VMA16
Homo sapiens	RefSeq	NR_030528.1	ILMN_387975	MIR770	NR_030528.1	NR_030528.1		768222	262205718	NR_030528.1	MIR770		ILMN_3308010	0003310326	S	10	TTCCGAGCCTCCAGTACCACGTGTCAGGGCCACATGAGCTGGGCCTCGTG				14q32.2b	Homo sapiens microRNA 770 (MIR770), microRNA.					
Homo sapiens	RefSeq	XM_001717034.1	ILMN_344654	LOC100134274	XM_001717034.1	XM_001717034.1		100134274	169204841	XM_001717034.1	LOC100134274	XP_001717086.1	ILMN_3243343	0002190170	S	348	AGCACCACAGCCAGCTCTAGCCCAGAGGGAAAGTAAGAGGATGTTTCTGC					PREDICTED: Homo sapiens hypothetical protein LOC100134274 (LOC100134274), mRNA.					
Homo sapiens	RefSeq	NM_001009616.1	ILMN_162669	SPANXN5	NM_001009616.2	NM_001009616.2		494197	122114543	NM_001009616.2	SPANXN5	NP_001009616.1	ILMN_1679348	0004390520	S	248	AGGAGGACGAAGGATCCTCACAGGAGGATGAAGACCTAGACTCATCTGCA	X	-	52842174-52842223	Xp11.22b	Homo sapiens SPANX family, member N5 (SPANXN5), mRNA.				SPANX-N5	
Homo sapiens	RefSeq	NM_001001802.1	ILMN_26425	OR2A42	NM_001001802.1	NM_001001802.1		402317	49227243	NM_001001802.1	OR2A42	NP_001001802.1	ILMN_1744109	0006020379	S	61	TTTGGGCTCTTCTCCCTGTTCTATATCTTCACCCTGCTGGGGAACGGGGC	7	-	143929808-143929857	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 42 (OR2A42), mRNA.					
Homo sapiens	RefSeq	XM_929117.1	ILMN_37536	LOC392232	XM_929117.1	XM_929117.1		392232	89028139	XM_929117.1	LOC392232	XP_934210.1	ILMN_1703109	0002970136	A	297	GTGTCACATCAACTTTGTGGATAACGGGAAAGCCAGCCCTCTCCATCTGG	8	-	73312915-73312964	8q13.3d	PREDICTED: Homo sapiens similar to Transient receptor potential cation channel subfamily A member 1 (Ankyrin-like with transmembrane domains protein 1) (Transformation sensitive-protein p120) (LOC392232), mRNA.					
Homo sapiens	RefSeq	NM_033305.2	ILMN_12350	VPS13A	NM_033305.2	NM_033305.2		23230	66346673	NM_033305.2	VPS13A	NP_150648.2	ILMN_2414826	0002710747	A	9261	GGTTTAGTAGGAGCGGTAGCAAGGCCAACTGGAGGCATCATAGACATGGC	9	+	79175809-79175858	9q21.13c	Homo sapiens vacuolar protein sorting 13 homolog A (S. cerevisiae) (VPS13A), transcript variant A, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11381254] [evidence NAS]	The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [pmid 11381253] [evidence NAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 11381254] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		KIAA0986; CHAC; FLJ42030	CHAC; FLJ42030; KIAA0986
Homo sapiens	RefSeq	XM_374637.3	ILMN_31499	LOC442606	XM_374637.3	XM_374637.3		442606	89025424	XM_374637.3	LOC442606	XP_374637.2	ILMN_1665150	0006200491	A	344	GTCATCACCCCCAGCTTCACACCCTTCACCGGTTTCCCATCATTGCCTAG					PREDICTED: Homo sapiens similar to Zinc-alpha-2-glycoprotein precursor (Zn-alpha-2-glycoprotein) (Zn-alpha-2-GP) (LOC442606), mRNA.					
Homo sapiens	RefSeq	NM_001735.2	ILMN_28154	C5	NM_001735.2	NM_001735.2		727	38016946	NM_001735.2	C5	NP_001726.2	ILMN_1746819	0001340241	S	5314	GGAACACCTCCTCAAACCTACCACTCAGGAATGTTTGCTGGGGCCGAAAG	9	-	123714714-123714763	9q33.2a	Homo sapiens complement component 5 (C5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3052276] [evidence EXP]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9218605] [evidence TAS]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 7649993] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10820279] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9590258] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 8759757] [evidence TAS]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8898085] [evidence TAS]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9590258] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 10820279] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10820279] [evidence TAS]	CPAMD4; FLJ17816; MGC142298; FLJ17822	CPAMD4; FLJ17816; MGC142298; FLJ17822
Homo sapiens	RefSeq	NM_024800.2	ILMN_178319	NEK11	NM_024800.3	NM_024800.3		79858	142351547	NM_024800.3	NEK11	NP_079076.2	ILMN_1788149	0003140168	I	2649	GACTCTAGCCTACAACATGCTGAGCTACAGCCCAGAAGCCAGACATGCCT	3	+	132551728-132551777	3q22.1a-q22.1b	Homo sapiens NIMA (never in mitosis gene a)- related kinase 11 (NEK11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 15161910] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 15161910] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 15161910] [evidence IDA]; The slowing of DNA synthesis in response to DNA damage by the prevention of new origin firing and the stabilization of slow replication fork progession [goid 31573] [pmid 15161910] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 15161910] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 15161910] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15161910] [evidence IPI]	FLJ23495	FLJ23495
Homo sapiens	RefSeq	XM_938440.1	ILMN_42637	LOC400682	XM_938440.2	XM_938440.2		400682	113428548	XM_938440.2	LOC400682	XP_943533.1	ILMN_1754678	0006660059	S	171	GTGTGGATGAGTGTAAGGTACACAAAGAAGATGATAACAAACTAAACCTG				19p12c	PREDICTED: Homo sapiens similar to Zinc finger protein 431 (LOC400682), mRNA.					
Homo sapiens	RefSeq	XR_037082.1	ILMN_340392	LOC100133795	XR_037082.1	XR_037082.1		100133795	169168469	XR_037082.1	LOC100133795		ILMN_3239969	0006290736	S	52	ACCTGATCAAGAAGACGGGAACAGCACAGGGCACTGGGAGCTGCAAACAC					PREDICTED: Homo sapiens misc_RNA (LOC100133795), miscRNA.					
Homo sapiens	RefSeq	NM_017848.3	ILMN_23237	FAM120C	NM_017848.3	NM_017848.3		54954	38348730	NM_017848.3	FAM120C	NP_060318.2	ILMN_2118612	0004260167	S	4089	GATGTGGCACAGTTCATTCACTCCCTATTGCCCACACCATGAAAGGGTGG	X	-	54115403-54115452	Xp11.22a	Homo sapiens family with sequence similarity 120C (FAM120C), mRNA.				CXorf17; FLJ20506; ORF34	CXorf17; FLJ20506; ORF34
Homo sapiens	RefSeq	XM_927214.1	ILMN_39057	LOC643958	XM_927214.1	XM_927214.1		643958	89036846	XM_927214.1	LOC643958	XP_932307.1	ILMN_1669634	0003390102	S	30	ACCTGCCAAGAAAACATCCATTCTGCAGCCCATGGATCAAGGAATAATTT	13	+	105733011-105733060		PREDICTED: Homo sapiens hypothetical protein LOC643958 (LOC643958), mRNA.					
Homo sapiens	RefSeq	NM_005035.2	ILMN_168627	POLRMT	NM_005035.3	NM_005035.3		5442	110618252	NM_005035.3	POLRMT	NP_005026.3	ILMN_1770356	0001990053	S	3485	CCTGACCTTCGTCTCTGTGCACGACTGTTACTGGACTCACGCAGCTGATG	19	-	617793-617842	19p13.3j	Homo sapiens polymerase (RNA) mitochondrial (DNA directed) (POLRMT), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 17337445] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a mitochondrial DNA template, usually by a specific mitochondrial RNA polymerase [goid 6390] [pmid 17337445] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 17337445] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17337445] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	h-mtRPOL; MTRPOL; APOLMT	MTRPOL; APOLMT; h-mtRPOL
Homo sapiens	RefSeq	NR_031596.1	ILMN_388522	MIR1227	NR_031596.1	NR_031596.1		100302283	269847044	NR_031596.1	MIR1227		ILMN_3308320	0004860010	S	37	ACAGCAGCCATGCAGAGCGGGCATTTGACCCCGTGCCACCCTTTTCCCCA					Homo sapiens microRNA 1227 (MIR1227), microRNA.					
Homo sapiens	RefSeq	NM_145185.2	ILMN_8266	MAP2K7	NM_145185.2	NM_145185.2		5609	40806198	NM_145185.2	MAP2K7	NP_660186.1	ILMN_1781104	0000870241	S	3077	TTTTATGAGTGTGTGTCCGCCCACCCCCACCCCCTTCAGTGTTAAGTGGG	19	+	7885068-7885117	19p13.2e	Homo sapiens mitogen-activated protein kinase kinase 7 (MAP2K7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9535930] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9535930] [evidence TAS]; A series of molecular signals in which a stress-activated MAP kinase cascade relays one or more of the signals; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase [goid 51403] [pmid 9535930] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9535930] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 9535930] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15299019] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 14697235] [evidence IPI]	MKK7; Jnkk2; PRKMK7; MAPKK7	MKK7; Jnkk2; PRKMK7; MAPKK7
Homo sapiens	RefSeq	NM_152272.2	ILMN_15127	CHMP7	NM_152272.2	NM_152272.2		91782	63029931	NM_152272.2	CHMP7	NP_689485.1	ILMN_1795933	0003440692	S	2950	CTGAGCCAGGATGTGCAATAGAAGCAGGGGTTGTCCCCTCTGCCAGATCT	8	+	23175016-23175065	8p21.3a	Homo sapiens CHMP family, member 7 (CHMP7), mRNA.	An endosomal sorting complex required for transport. Consists of two soluble subcomplexes of highly charged coiled-coil proteins and is required for sorting and/or concentration of multivesicular body (MVB) cargoes [goid 815] [pmid 16856878] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances from late endosomes to the vacuole. In yeast, after transport to the prevacuolar compartment, endocytic content is delivered to the late endosome and on to the vacuole. This pathway is analogous to endosome to lysosome transport [goid 45324] [pmid 16856878] [evidence IMP]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 16856878] [evidence IMP]	MGC29816	MGC29816
Homo sapiens	RefSeq	NM_001080853.1	ILMN_170031	LOC728758	NM_001080853.1	NM_001080853.1		728758	124249407	NM_001080853.1	LOC728758	NP_001074322.1	ILMN_2134855	0000730475	S	1564	TCCCTCATCTTCAGTGTATGGGTTACATTAAGACTGTCCTTTCCAGGGCC				15q15.3b	Homo sapiens hCG1789710 (LOC728758), mRNA.					
Homo sapiens	RefSeq	NM_001007595.1	ILMN_35502	NLF2	XM_940314.2	XM_940314.2		388125	113425668	XM_940314.2	NLF2	XP_945407.2	ILMN_1748751	0005860093	I	922	CCCTGGAGACTCCGGACACTGACAGCCGCGTGGTACAGAATAAACGTTAT				15q22.2b	PREDICTED: Homo sapiens nuclear localized factor 2 (NLF2), mRNA.					
Homo sapiens	RefSeq	XM_940314.1	ILMN_35502	NLF2	XM_940314.2	XM_940314.2		388125	113425668	XM_940314.2	NLF2	XP_945407.2	ILMN_1752065	0007100477	A	70	ACACTGAAGAAGAGAGAAAGGCGCACCTCTTCCCGCCACTCCTAGCCCCA				15q22.2b	PREDICTED: Homo sapiens nuclear localized factor 2 (NLF2), mRNA.					
Homo sapiens	RefSeq	NM_001011543.1	ILMN_22178	MAGEA10	NM_021048.3	NM_021048.3		4109	29029613	NM_021048.3	MAGEA10	NP_066386.1	ILMN_1741430	0002490541	A	1374	GCCATGGCCAGTGCAAGTTCTAGCGCTACAGGTAGCTTCTCCTACCCTGA	X	-	151302986-151303035	Xq28e	Homo sapiens melanoma antigen family A, 10 (MAGEA10), transcript variant 2, mRNA.				MAGE10; MGC10599	MAGE10; MGC10599
Homo sapiens	RefSeq	NM_012364.1	ILMN_15896	OR1Q1	NM_012364.1	NM_012364.1		158131	50052933	NM_012364.1	OR1Q1	NP_036496.1	ILMN_1745651	0000650093	S	631	CTGGCCTTCATTACTGCCTCCTATGCCTGCATCATCCTGGTGGTCCTCCG	9	+	124417468-124417517	9q33.2b	Homo sapiens olfactory receptor, family 1, subfamily Q, member 1 (OR1Q1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9119360] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 9119360] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 9119360] [evidence NAS]	TPCR106; OST226OR9-A; HSTPCR106; OR1Q3; OR1Q2; OR9-A; OR9-25; OST226	OR1Q3; OR9-25; OST226; TPCR106; OST226OR9-A; HSTPCR106; OR1Q2; OR9-A
Homo sapiens	RefSeq	XM_925811.1	ILMN_179076	LOC642263	XR_016113.1	XR_016113.1		642263	113417377	XR_016113.1	LOC642263		ILMN_1676596	0003930192	S	572	CAAATTCGAGCATCTTAAAATGATTCAACAGGAGGAGATAAGGAAGCTTG	6	-	85321-85370	6p25.3b	PREDICTED: Homo sapiens hypothetical LOC642263 (LOC642263), mRNA.					
Homo sapiens	RefSeq	XM_939851.1	ILMN_39331	LOC650770	XM_939851.1	XM_939851.1		650770	89061764	XM_939851.1	LOC650770	XP_944944.1	ILMN_1674341	0002810603	S	313	GGCTGGGATTGACCTTTCTCTTCAAACAGATTGGAAACCCAAGGTTTCCT					PREDICTED: Homo sapiens similar to pote protein (LOC650770), mRNA.					
Homo sapiens	RefSeq	NM_003669.1	ILMN_8860	INE1	NM_003669.1	NM_003669.1		8552	4504692	NM_003669.1	INE1	NP_003660.1	ILMN_1770344	0002350113	S	596	GGCCTGGGTCTTCCCCAGCATTAAGTAAATCAGTCTCAGGCAGACAGCCC	X	+	46949859-46949908	Xp11.3a	Homo sapiens inactivation escape 1 (INE1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC97326; MGC97335; MGC97386	MGC97335; MGC97326; MGC97386
Homo sapiens	Unigene	Hs.7093	ILMN_70960	HS.7093	Hs.7093		Hs.7093		22209096	BC036491			ILMN_1877738	0002030095	S	2545	GGTTCACTCAGAAGGCAACCGCCTATAGATGGAACAGCCCTGAGCAACAT	5	+	143845002-143845051		Homo sapiens cDNA clone IMAGE:5262496					
Homo sapiens	RefSeq	NM_001241.2	ILMN_11186	CCNT2	NM_001241.2	NM_001241.2		905	17978467	NM_001241.2	CCNT2	NP_001232.1	ILMN_2357682	0001260255	A	1972	CTCAGCACCCTCGTGAAACTGGACAAGAAGCCAGTGGAGACCAACGGTCC	2	+	135428536-135428585	2q21.3a	Homo sapiens cyclin T2 (CCNT2), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16109376] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9499409] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9499409] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16109376] [evidence IDA]	FLJ90560; MGC134840	FLJ90560; MGC134840
Homo sapiens	RefSeq	NM_002938.2	ILMN_26467	RNF4	NM_002938.2	NM_002938.2		6047	34305289	NM_002938.2	RNF4	NP_002929.1	ILMN_1687941	0004200220	S	2198	CACTGTCGTCCTTCCTCAGAGGGCCTCACGCCAAACAAACGGCCTTTTCG	4	+	2486633-2486682	4p16.3a	Homo sapiens ring finger protein 4 (RNF4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9710597] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9710597] [evidence TAS]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 15572661] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9710597] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9710597] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]	RES4-26; SNURF	RES4-26; SNURF
Homo sapiens	RefSeq	NM_022138.1	ILMN_4650	SMOC2	NM_022138.1	NM_022138.1		64094	24308276	NM_022138.1	SMOC2	NP_071421.1	ILMN_1719641	0002630437	S	2580	AGGGCACCCAGTGTCTTAAGGAACCATTTGGAGGACAGTCTGAGAGCAGG	6	+	168810229-168810278	6q27d-q27e	Homo sapiens SPARC related modular calcium binding 2 (SMOC2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	dJ421D16.1; MSTP140; bA37D8.1; SMAP2; bA270C4A.1; SMOC-2; MST117; MSTP117	dJ421D16.1; MSTP140; bA37D8.1; SMAP2; bA270C4A.1; SMOC-2; MST117; MSTP117
Homo sapiens	RefSeq	NM_032843.3	ILMN_23231	FIBCD1	NM_032843.3	NM_032843.3		84929	37059779	NM_032843.3	FIBCD1	NP_116232.2	ILMN_1727135	0003830743	S	3106	GGGGTGTGGGGTTCCGTTCTCCCTTCCCCTCCCACTGAAGTTTGTGCTTA	9	-	132767745-132767794	9q34.12a-q34.13a	Homo sapiens fibrinogen C domain containing 1 (FIBCD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	FLJ14810	FLJ14810
Homo sapiens	Unigene	Hs.400131	ILMN_89560	HS.400131	Hs.400131		Hs.400131		19048181	BM726848			ILMN_1848893	0006900056	S	446	TGTGCCCAGGACTGCAATGGCCTCCCACACTACCTCACTACCCTGGTCCA	21	-	44403413-44403462		UI-E-EJ0-air-c-22-0-UI.r1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-air-c-22-0-UI 5, mRNA sequence					
Homo sapiens	Unigene	Hs.522428	ILMN_100114	HS.522428	Hs.522428		Hs.522428		13525645	BG534105			ILMN_1830606	0002320379	S	387	GAAAGCATCAGCCAGGGGTCCAAGAACTTCCCTCTGGAGCCTCACACTCC	9	+	131087635-131087684		602553220F1 NIH_MGC_77 Homo sapiens cDNA clone IMAGE:4662965 5, mRNA sequence					
Homo sapiens	RefSeq	XM_940973.1	ILMN_44885	LOC651754	XM_940973.1	XM_940973.1		651754	89034598	XM_940973.1	LOC651754	XP_946066.1	ILMN_1763746	0000870162	S	1	ATGGTCTGCTTCCGACCCTCCTACAGCATGTGCAACCTACAGCCGACCTC					PREDICTED: Homo sapiens similar to pleckstrin homology domain containing, family A member 7 (LOC651754), mRNA.					
Homo sapiens	RefSeq	XM_927456.1	ILMN_33863	LOC644278	XM_927456.1	XM_927456.1		644278	89035714	XM_927456.1	LOC644278	XP_932549.1	ILMN_1668014	0005360053	S	181	GTGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGGTCAGCATGAAGAG	12	-	103065354-103065403		PREDICTED: Homo sapiens similar to bruno-like 4, RNA binding protein (LOC644278), mRNA.					
Homo sapiens	RefSeq	NM_012470.2	ILMN_7153	TNPO3	NM_012470.2	NM_012470.2		23534	42518066	NM_012470.2	TNPO3	NP_036602.1	ILMN_1683811	0003360241	S	3222	ACTGTGTCCCACAATCAGAAACCTCCGTTGTGGCAGAGGGGCCTTCACCG	7	-	128595345-128595394	7q32.1a	Homo sapiens transportin 3 (TNPO3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10366588] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TRN-SR; TRN-SR2; TRNSR; MTR10A; IPO12	TRN-SR; TRN-SR2; TRNSR; MTR10A; IPO12
Homo sapiens	RefSeq	NM_152618.2	ILMN_26804	BBS12	NM_152618.2	NM_152618.2		166379	40217787	NM_152618.2	BBS12	NP_689831.2	ILMN_2166972	0005570435	S	3075	GATGAAGCCAACCTGCAGTATTAACCTCAGTCCTGTCCCCCAAGGTCTTG	4	+	123665929-123665978	4q27d	Homo sapiens Bardet-Biedl syndrome 12 (BBS12), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	FLJ41559; FLJ35630; C4orf24	FLJ41559; FLJ35630; C4orf24
Homo sapiens	RefSeq	NM_145171.2	ILMN_7304	GPHB5	NM_145171.2	NM_145171.2		122876	39753962	NM_145171.2	GPHB5	NP_660154.2	ILMN_1788650	0001820050	S	186	CGCTGTGAGACCTGGCAGAAACCCATTCTGGAACCCCCCTATATTGAAGC	14	-	63779798-63779830:63784361-63784377	14q23.2b	Homo sapiens glycoprotein hormone beta 5 (GPHB5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	ZLUT1; GPB5	ZLUT1; GPB5
Homo sapiens	RefSeq	NM_198085.1	ILMN_163921	RNF148	NM_198085.1	NM_198085.1		378925	37675276	NM_198085.1	RNF148	NP_932351.1	ILMN_1763184	0002450241	S	1056	TCCATAAGGCATGCATTGACCCCTGGCTTTTAGCCCATAGGACATGTCCC	7	-	122341916-122341965	7q31.32a	Homo sapiens ring finger protein 148 (RNF148), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC35222	MGC35222
Homo sapiens	RefSeq	NM_021149.2	ILMN_3414	COTL1	NM_021149.2	NM_021149.2		23406	23510452	NM_021149.2	COTL1	NP_066972.1	ILMN_1788283	0001070678	S	1424	AGAGAGGCCCAGGGTGGGGACTGGGAATTTAAGGAGAGCTGGGAACGGAT	16	-	84599555-84599604	16q24.1a	Homo sapiens coactosin-like 1 (Dictyostelium) (COTL1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11583571] [evidence IDA]; Interacting selectively with any enzyme [goid 19899] [pmid 11297527] [evidence IPI]	CLP; FLJ43657; MGC19733	CLP; FLJ43657; MGC19733
Homo sapiens	Unigene	Hs.5724	ILMN_70875	HS.5724	Hs.5724		Hs.5724		34365429	BX641108			ILMN_1839019	0002760309	S	3509	AGCCCCACCGTGATGAGCTGCTAGTCTGAATAACGTTCCCTGACTTAGGG	3	+	190090691-190090740		Homo sapiens mRNA; cDNA DKFZp779O0231 (from clone DKFZp779O0231)					
Homo sapiens	Unigene	Hs.156568	ILMN_79330	HS.156568	Hs.156568		Hs.156568		28290328	BX119820			ILMN_1850795	0000060441	S	310	CCTCGGGGCAGGTTCTGAGGGAGAATGTACAACTTTATTTTGATGGCAGG	5	+	38002649-38002698		BX119820 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998N033519 ; IMAGE:1393730, mRNA sequence					
Homo sapiens	RefSeq	XM_936353.1	ILMN_34049	LOC642196	XM_936353.1	XM_936353.1		642196	89026490	XM_936353.1	LOC642196	XP_941446.1	ILMN_1800588	0006660669	S	491	CAGGAAACTTGAAACCCCATCATCATGGGTCTGAGGCCCCCAGGATGAAA					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region C5 precursor (LOC642196), mRNA.					
Homo sapiens	RefSeq	NM_178123.3	ILMN_17887	SESTD1	NM_178123.3	NM_178123.3		91404	59709431	NM_178123.3	SESTD1	NP_835224.2	ILMN_1724495	0000670202	S	1754	GCGCTGCACTTCTCGGTCATCTGGGGATACACTTCCTCGACTGAACAGAG	2	-	179688097-179688146	2q31.2c	Homo sapiens SEC14 and spectrin domains 1 (SESTD1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp434O0515; SOLO	DKFZp434O0515; SOLO
Homo sapiens	RefSeq	NM_022726.2	ILMN_162533	ELOVL4	NM_022726.2	NM_022726.2		6785	21362099	NM_022726.2	ELOVL4	NP_073563.1	ILMN_1737965	0004760056	S	2888	CTGTACTGGTTCCCAAGAGCTATTCATTCCCTGCTACCTGATTTCAGCAC	6	-	80681277-80681326	6q14.1c-q14.1d	Homo sapiens elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 (ELOVL4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [pmid 11138005] [evidence NAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [pmid 11138005] [evidence NAS]	ADMD; STGD3; STGD2	ADMD; STGD3; STGD2
Homo sapiens	RefSeq	NM_006416.2	ILMN_23284	SLC35A1	NM_006416.3	NM_006416.3		10559	142375164	NM_006416.3	SLC35A1	NP_006407.1	ILMN_1741440	0006510204	S	1601	ACTCGGACAATTTCTGGGTGGTGACTGAGTACCCCTTTAGTGAGTACCCC	6	+	88278523-88278572	6q15a	Homo sapiens solute carrier family 35 (CMP-sialic acid transporter), member A1 (SLC35A1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9644260] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9644260] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9644260] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9644260] [evidence TAS]; The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]; The directed movement of CMP-sialic acid into, out of, within or between cells. CMP-sialic acid is a substance composed of sialic acid in glycosidic linkage with cytidine monophosphate [goid 15782] [pmid 9644260] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a CMP-sialic acid from one side of the membrane to the other. CMP-sialic acid is a substance composed of sialic acid in glycosidic linkage with cytidine monophosphate [goid 5456] [pmid 9644260] [evidence TAS]	inactive; hCST; CMPST; CST	inactive; hCST; CMPST; CST
Homo sapiens	RefSeq	XR_041793.1	ILMN_350287	LOC730179	XR_041793.1	XR_041793.1		730179	169161903	XR_041793.1	LOC730179		ILMN_3228832	0002490041	A	725	TGGTATTTGGCACATTCTAAGGGACAAGGCTCATGTTCAGGGATGGGGCC				1q25.2c	PREDICTED: Homo sapiens misc_RNA (LOC730179), miscRNA.					
Homo sapiens	RefSeq	NM_002747.3	ILMN_38629	MAPK4	NM_002747.3	NM_002747.3		5596	89276768	NM_002747.3	MAPK4	NP_002738.2	ILMN_2112128	0004860403	S	4271	CCCCCAACACTCCCAAAGATACCCACAGGAAGTCCAGCCAGTTTCCAGGT	18	+	46511729-46511778	18q21.1g-q21.2a	Homo sapiens mitogen-activated protein kinase 4 (MAPK4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7969157] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 7969157] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Erk4; p63MAPK; ERK3; PRKM4	Erk4; p63MAPK; ERK3; PRKM4
Homo sapiens	RefSeq	XR_018702.2	ILMN_177614	LOC646446	XR_018702.2	XR_018702.2		646446	169161848	XR_018702.2	LOC646446		ILMN_3289016	0004920504	M	107	GCACCTTAGAATGCCCCGTCAGCTGTTCTCTGGTGGCTGGAATTGACTGT				1q23.2b	PREDICTED: Homo sapiens similar to hCG2040301 (LOC646446), mRNA.					
Homo sapiens	RefSeq	NR_031694.1	ILMN_388613	MIR1281	NR_031694.1	NR_031694.1		100302237	269847469	NR_031694.1	MIR1281		ILMN_3309419	0004880128	S	4	GGCACCGGGAGGAGGTGAGTGTCTCTTGTCGCCTCCTCCTCTCCCCCCTT					Homo sapiens microRNA 1281 (MIR1281), microRNA.					
Homo sapiens	RefSeq	NM_005005.2	ILMN_3456	NDUFB9	NM_005005.2	NM_005005.2		4715	144226212	NM_005005.2	NDUFB9	NP_004996.1	ILMN_3243859	0006660193	S	442	TGCCAAGAGAGAACAGTGGAAGAAACTGCGGAGGGAAAGCTGGGAACGAG	8	+	125559303-125559352	8q24.13d	Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa (NDUFB9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 8661098] [evidence TAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	DKFZp566O173; UQOR22; FLJ22885; B22; LYRM3	B22; DKFZp566O173; UQOR22; FLJ22885; LYRM3
Homo sapiens	RefSeq	NM_145039.2	ILMN_174951	CENPBD1	NM_145039.2	NM_145039.2		92806	49619233	NM_145039.2	CENPBD1	NP_659476.2	ILMN_3238740	0004010470	S	2388	CTGTCGGCAGCCCTCTCACATTTTGAGGCTGGCTTGTAGGTCCTTGCTAG	16	-	90036505-90036554	16q24.3b	Homo sapiens CENPB DNA-binding domains containing 1 (CENPBD1), mRNA.				FLJ31569; FLJ23771; MGC13198	FLJ31569; FLJ23771; MGC13198
Homo sapiens	RefSeq	NM_016135.2	ILMN_7638	ETV7	NM_016135.2	NM_016135.2		51513	31542589	NM_016135.2	ETV7	NP_057219.1	ILMN_1700671	0006370768	S	1433	AGGAAGCCAGGCACCGATAGAGCACCCAGCCCCACCCCTGTAAATGGAAT	6	-	36442092-36442141	6p21.31a	Homo sapiens ets variant 7 (ETV7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10828014] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10828014] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10828014] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 10828014] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	TELB; TEL2; TEL-2	TELB; TEL2; TEL-2
Homo sapiens	RefSeq	NM_004348.3	ILMN_21030	RUNX2	NM_004348.3	NM_004348.3		860	66934968	NM_004348.3	RUNX2	NP_004339.3	ILMN_1669066	0001050349	I	274	TCCTCAGCCCCATCACCTCCATCCTCTTTCCCCCCGTCTCGCCTTCACCC	6	+	45390187-45390236	6p12.3f	Homo sapiens runt-related transcription factor 2 (RUNX2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IEA]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [evidence IEA]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [pmid 12217689] [evidence TAS]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11965546] [evidence IDA]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [evidence IEA]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9182765] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9182762] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11965546] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12145306] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11965546] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 11965546] [evidence IDA]	PEBP2A2; MGC120023; PEA2aA; CBFA1; MGC120022; AML3; OSF2; PEBP2aA1; PEBP2A1; PEBP2aA; CCD1; CCD	PEBP2A2; MGC120023; PEA2aA; CBFA1; MGC120022; AML3; OSF2; PEBP2aA1; PEBP2A1; PEBP2aA; CCD1; CCD
Homo sapiens	RefSeq	NM_032407.1	ILMN_27761	PCDHGC5	NM_032407.1	NM_032407.1		56097	14277684	NM_032407.1	PCDHGC5	NP_115783.1	ILMN_1655171	0004670041	I	2563	CTTGGTCGCTGGCTGCGCTCCACCCGATTCTCGGGATCATTGGACCGTTT	5	+	140851554-140851603	5q31.3c	Homo sapiens protocadherin gamma subfamily C, 5 (PCDHGC5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC138288; PCDH-GAMMA-C5; MGC138286	MGC138288; PCDH-GAMMA-C5; MGC138286
Homo sapiens	RefSeq	NM_018929.2	ILMN_27761	PCDHGC5	NM_032407.1	NM_032407.1		56097	14277684	NM_032407.1	PCDHGC5	NP_115783.1	ILMN_1767649	0000780086	A	2354	GTGACTTCACTTTTCTAAGACCCCTCAGCGTTCAGCAGCCCACAGCTCTG	5	+	140851345-140851394	5q31.3c	Homo sapiens protocadherin gamma subfamily C, 5 (PCDHGC5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC138288; PCDH-GAMMA-C5; MGC138286	MGC138288; PCDH-GAMMA-C5; MGC138286
Homo sapiens	RefSeq	NM_131916.1	ILMN_164741	PPIL3	NM_131916.1	NM_131916.1		53938	19557639	NM_131916.1	PPIL3	NP_572028.1	ILMN_1760040	0001430161	I	395	AGTTCTTGGGATACTGCGAGTGAACAGTGGGCGGCGAGGCTGTTGTTGCA	2	-	201753555-201753604	2q33.1e	Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 3 (PPIL3), transcript variant PPIL3c, mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18474220] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CYPJ	CYPJ
Homo sapiens	RefSeq	XM_939848.1	ILMN_138849	LOC650767	XM_939848.1	XM_939848.1		650767	89040979	XM_939848.1	LOC650767	XP_944941.1	ILMN_1798146	0001010301	S	2130	TCATGGGAAGGTCACTGCCTGAGGCTGCTTGATAAACTCCAGCCCTTTCC				16q21a	PREDICTED: Homo sapiens hypothetical protein LOC650767 (LOC650767), mRNA.					
Homo sapiens	RefSeq	NM_016540.2	ILMN_165214	GPR83	NM_016540.2	NM_016540.2		10888	33354256	NM_016540.2	GPR83	NP_057624.2	ILMN_1740146	0006860603	S	3465	CAGAAGGTTTGTCCTGCTCTGGGAAGCATGGAGGATGTTGTACTTCACTC	11	-	93750725-93750774	11q21b	Homo sapiens G protein-coupled receptor 83 (GPR83), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]	GPR72; GIR	GPR72; GIR
Homo sapiens	RefSeq	NM_016540.2	ILMN_165214	GPR83	NM_016540.2	NM_016540.2		10888	33354256	NM_016540.2	GPR83	NP_057624.2	ILMN_2174341	0000110398	S	3931	GGAGAACCCACTGATGGCTCATTAGATCTGTCCCTTCCCCGAGGTCCGTG	11	-	93750259-93750308	11q21b	Homo sapiens G protein-coupled receptor 83 (GPR83), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]	GPR72; GIR	GPR72; GIR
Homo sapiens	RefSeq	XR_037421.1	ILMN_345053	LOC100130190	XR_037421.1	XR_037421.1		100130190	169216448	XR_037421.1	LOC100130190		ILMN_3188099	0002030224	A	2681	CCTGTGTGAAAAGGTCCTGAGATCAATGAGGAAGGCCCAAGTGTCCCCAC				Xq26.3c	PREDICTED: Homo sapiens misc_RNA (LOC100130190), miscRNA.					
Homo sapiens	RefSeq	NM_001001484.1	ILMN_163092	PTER	NM_001001484.1	NM_001001484.1		9317	47933340	NM_001001484.1	PTER	NP_001001484.1	ILMN_1688090	0002000139	I	163	AGCGAACTTCCTGCCTCAGCCTCCTGAGCTTCCTGAGTAGCTGCGACTAC	10	+	16479438-16479487	10p13a	Homo sapiens phosphotriesterase related (PTER), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism [goid 9056] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism [goid 9056] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	RPR-1	RPR-1
Homo sapiens	RefSeq	NM_016139.2	ILMN_15841	CHCHD2	NM_016139.2	NM_016139.2		51142	32307179	NM_016139.2	CHCHD2	NP_057223.1	ILMN_2191681	0004540730	S	659	CCTGGCTTCCTTGCTTCAGAATTGAAATGGAAGTGGGGGTGTCCCTACTC	7	-	56169372-56169421	7p11.2b	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 2 (CHCHD2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			C7orf17	C7orf17
Homo sapiens	RefSeq	NM_014444.2	ILMN_19158	TUBGCP4	NM_014444.2	NM_014444.2		27229	38454193	NM_014444.2	TUBGCP4	NP_055259.2	ILMN_1792173	0000240242	S	2525	GCACCTACTACGTACCTTGGTACTGTTCAAGCTGTGGGAGATACAGCGGT	15	+	41484988-41485037	15q15.3a	Homo sapiens tubulin, gamma complex associated protein 4 (TUBGCP4), mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 10562286] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A multiprotein complex composed of gamma-tubulin other non-tubulin proteins that forms a flexible open ring structure thought to be the unit of nucleation at the minus end of a microtubule [goid 8274] [pmid 10562286] [evidence NAS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10562286] [evidence NAS]; The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [pmid 10562286] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 10562286] [evidence NAS]	GCP4; FLJ14797; 76P	GCP4; FLJ14797; 76P
Homo sapiens	RefSeq	XM_941114.1	ILMN_31585	LOC651859	XM_941114.1	XM_941114.1		651859	89062219	XM_941114.1	LOC651859	XP_946207.1	ILMN_1694864	0003170554	S	298	CGGAGCCTAAGGCGTGGGTGTCTAGGCAAGGAACCCCCAAACCGGGAGAG					PREDICTED: Homo sapiens hypothetical protein LOC651859 (LOC651859), mRNA.					
Homo sapiens	RefSeq	NM_014439.3	ILMN_13150	IL1F7	NM_014439.3	NM_014439.3		27178	27894294	NM_014439.3	IL1F7	NP_055254.2	ILMN_1697710	0003990450	A	313	TTCTTTGCATTAGCCTCATCCTTGAGCTCAGCCTCTGCGGAGAAAGGAAG	2	+	113391688-113391737	2q13d	Homo sapiens interleukin 1 family, member 7 (zeta) (IL1F7), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10625660] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10744718] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10744718] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10625660] [evidence NAS]	Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [evidence IEA]	IL1H4; IL-1F7; IL1RP1; FIL1(ZETA); IL-1H4; FIL1Z; FIL1; IL-1RP1	IL1H4; IL-1F7; IL1RP1; FIL1(ZETA); IL-1H4; FIL1Z; FIL1; IL-1RP1
Homo sapiens	RefSeq	NM_032920.1	ILMN_19565	C21ORF124	NM_032920.1	NM_032920.1		85006	14249705	NM_032920.1	C21orf124	NP_116309.1	ILMN_1764503	0006060328	S	1781	GGTTAAGCCCGCTCCCACCAGCTCCTGTCCGATAAGTTAAAGATACGCTG	21	+	43982979-43983028	21q22.3c	Homo sapiens chromosome 21 open reading frame 124 (C21orf124), mRNA.				FLJ31940; MGC15873; PRED79	FLJ31940; MGC15873; PRED79
Homo sapiens	Unigene	Hs.541600	ILMN_105817	HS.541600	Hs.541600		Hs.541600		30981929	CD238464			ILMN_1906625	0004640653	S	171	TAGGTGGGTCTGGAAAGGTGGGGTGAGTTGCTGTAACTGTCTCTGGACTC	2	-	188172213-188172262		FNPBAG12 FNP Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_020853.1	ILMN_26339	KIAA1467	NM_020853.1	NM_020853.1		57613	62821775	NM_020853.1	KIAA1467	NP_065904.1	ILMN_1668619	0001580333	S	4334	TTCTTGTGAAATGTGTCCCTAAGCCTCCTTCTCCTTGCAGGCAGCCACCC	12	+	13127273-13127322	12p13.1b	Homo sapiens KIAA1467 (KIAA1467), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp781O012	DKFZp781O012
Homo sapiens	RefSeq	NM_000889.1	ILMN_26232	ITGB7	NM_000889.1	NM_000889.1		3695	4504776	NM_000889.1	ITGB7	NP_000880.1	ILMN_1777519	0003990379	S	2490	GTGCCATCACGACCACCATCAATCCTCGCTTTCAAGAGGCAGACAGTCCC	12	-	53585338-53585339:53585340-53585387	12q13.13e	Homo sapiens integrin, beta 7 (ITGB7), mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 2040616] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2040616] [evidence TAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14681217] [evidence IPI]		
Homo sapiens	RefSeq	NM_001005240.1	ILMN_11980	OR4F17	NM_001005240.1	NM_001005240.1		81099	52546738	NM_001005240.1	OR4F17	NP_001005240.1	ILMN_3236198	0004290546	S	165	GCTAGCCAACCTCTCACTCATTGATCTGTCTCTGTCTTCAGTCACAGCCC	19	+	61843-61892	19p13.3j	Homo sapiens olfactory receptor, family 4, subfamily F, member 17 (OR4F17), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR4F19; OR4F18; OR4F11P	OR4F19; OR4F18; OR4F11P
Homo sapiens	RefSeq	NM_021208.1	ILMN_1065	C9ORF27	NM_021208.1	NM_021208.1		58483	10864018	NM_021208.1	C9orf27	NP_067031.1	ILMN_1741992	0000290411	S	651	GCTCTGTCACTCAATGGTTGGGAAATTTGTGATCATCTCTACGCCTTGCT	9	-	117690337-117690386	9q33.1a	Homo sapiens chromosome 9 open reading frame 27 (C9orf27), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	EST-YD1	EST-YD1
Homo sapiens	RefSeq	NM_005367.4	ILMN_24182	MAGEA12	NM_005367.4	NM_005367.4		4111	58530872	NM_005367.4	MAGEA12	NP_005358.2	ILMN_1718107	0004830739	S	353	CCCTCCCCACTACCATCAACTATACTCTCTGGAGTCAATCCGATGAGGGC	X	-	151651198-151651247	Xq28e	Homo sapiens melanoma antigen family A, 12 (MAGEA12), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MAGE12	MAGE12
Homo sapiens	RefSeq	NM_015458.3	ILMN_179450	MTMR9	NM_015458.3	NM_015458.3		66036	33598962	NM_015458.3	MTMR9	NP_056273.2	ILMN_1652521	0006960014	S	7181	CCCCTGTACCCTATAACTGTAATCATTCACCTTGGGTTGGCCGGTTTGTC	8	+	11184850-11184899	8p23.1b	Homo sapiens myotubularin related protein 9 (MTMR9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Modulates the activity of an enzyme [goid 30234] [evidence IEA]	LIP-STYX; C8orf9; DKFZp434K171; MTMR8; MGC126672	LIP-STYX; C8orf9; DKFZp434K171; MTMR8; MGC126672
Homo sapiens	RefSeq	NM_130770.2	ILMN_15908	HTR3C	NM_130770.2	NM_130770.2		170572	47519866	NM_130770.2	HTR3C	NP_570126.2	ILMN_1739275	0001110301	S	1569	CAGGCTGCTCATTCCTGCTCACCCTCAGTCTCCCTGAGCTACCACCTAAC	3	+	183778331-183778380	3q27.1b	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3, family member C (HTR3C), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]		
Homo sapiens	RefSeq	NM_006670.3	ILMN_163323	TPBG	NM_006670.3	NM_006670.3		7162	34222307	NM_006670.3	TPBG	NP_006661.1	ILMN_3247223	0001940278	S	2145	GCAGACGTTAGCAGGCTCTTCAAAATAACTCCATGGTGCACAGGAGCACC	6	+	83133116-83133165	6q14.1e	Homo sapiens trophoblast glycoprotein (TPBG), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10366710] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10366710] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	5T4; M6P1; 5T4-AG	5T4; M6P1; 5T4-AG
Homo sapiens	RefSeq	NM_013989.2	ILMN_165420	DIO2	NM_013989.3	NM_013989.3		1734	148277091	NM_013989.3	DIO2	NP_054644.1	ILMN_1749162	0003800717	I	449	GGCAGCAGCTCCGAATTGAATGAATTGATGGGCACACTCCAACTGCTGGG	14	-	80678027-80678076	14q31.1b	Homo sapiens deiodinase, iodothyronine, type II (DIO2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9837913] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [pmid 9837913] [evidence NAS]; The formation of either of the compounds secreted by the thyroid gland, mainly thyroxine and triiodothyronine. This is achieved by the iodination and joining of tyrosine molecules to form the precursor thyroglobin, proteolysis of this precursor gives rise to the thyroid hormones [goid 6590] [pmid 9837913] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42404] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3,5,3'-L-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + donor-H2 [goid 4800] [pmid 9837913] [evidence TAS]; Interacting selectively with selenium (Se) [goid 8430] [pmid 9837913] [evidence IC ]	D2; 5DII; SelY; TXDI2	D2; SelY; TXDI2
Homo sapiens	RefSeq	XM_936048.1	ILMN_35326	LOC642008	XM_936048.1	XM_936048.1		642008	88986785	XM_936048.1	LOC642008	XP_941141.1	ILMN_1766663	0002850053	S	7596	GAAGTGTCCACTGCACGCAGCTTGGCAGAACTATTTTCAGGGCCATAGGA					PREDICTED: Homo sapiens similar to cadherin 12, type 2 preproprotein (LOC642008), mRNA.					
Homo sapiens	RefSeq	NM_152446.2	ILMN_163756	C14ORF145	NM_152446.2	NM_152446.2		145508	64085251	NM_152446.2	C14orf145	NP_689659.2	ILMN_1806825	0003830164	S	4301	AGTGTCTAAGAACGTATTCCCTTTACACGCTGATCTCCTAGTGGAGAAGG	14	-	80032680-80032729	14q31.1b	Homo sapiens chromosome 14 open reading frame 145 (C14orf145), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]			C14orf61	C14orf61
Homo sapiens	RefSeq	NM_001585.2	ILMN_165346	MPPED1	NM_001044370.1	NM_001044370.1		758	113204626	NM_001044370.1	MPPED1	NP_001037835.1	ILMN_1809385	0003940240	A	810	ACTCGGAGGTCACCGTGCGGGGCTTCCGGATCTATGGCTCCCCATGGCAG	22	+	42200740-42200785:42229853-42229856	22q13.2c	Homo sapiens metallophosphoesterase domain containing 1 (MPPED1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC88045; C22orf1; 239AB; FAM1A	C22orf1; FAM1A; MGC88045; 239AB
Homo sapiens	Unigene	Hs.575417	ILMN_127598	HS.575417	Hs.575417		Hs.575417		10808843	BF054947			ILMN_1852651	0002710040	S	74	GTCTCCTCCCCGAGGCCGCCGCAGCCCGGGTCTTTCCCAGATGTGAAGGT	7	-	100124107-100124130:100129496-100129521		7j82c08.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:3392942 3, mRNA sequence					
Homo sapiens	Unigene	Hs.546379	ILMN_109297	HS.546379	Hs.546379		Hs.546379		1100165	L34703			ILMN_1884922	0007560553	S	347	GTGCATACTCTGGGGCTGGGAGTTACCAACTCACTTTCGGGAAGGGGACC	14	+	22054440-22054489		Homo sapiens T-cell receptor alpha chain (TCRA) mRNA (HLA-A1, 24; B7, 8; DR 1, 3), complete cds					
Homo sapiens	RefSeq	XM_943533.1	ILMN_30624	LOC346887	XM_943533.1	XM_943533.1		346887	89028900	XM_943533.1	LOC346887	XP_948626.1	ILMN_1714741	0007150491	A	1424	GTCCCGTGGAGGGACACAAGAGCGAGGACAGCATGGTTCTAATGGCCAGG					PREDICTED: Homo sapiens similar to solute carrier family 16 (monocarboxylic acid transporters), member 14 (LOC346887), mRNA.					
Homo sapiens	RefSeq	NM_016516.2	ILMN_9216	VPS54	NM_016516.2	NM_016516.2		51542	54234033	NM_016516.2	VPS54	NP_057600.2	ILMN_1761086	0006060379	A	3702	CTACCACCGTATGTCAACTGGGTAAAGCCTTCCAGAGCTCTCTAAATACC	2	-	64119909-64119958	2p15a-p14c	Homo sapiens vacuolar protein sorting 54 homolog (S. cerevisiae) (VPS54), transcript variant 1, mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	hVps54L; HCC8; SLP-8p; VPS54L	hVps54L; HCC8; SLP-8p; VPS54L
Homo sapiens	RefSeq	NM_012309.1	ILMN_1021	SHANK2	NM_012309.1	NM_012309.1		22941	19743793	NM_012309.1	SHANK2	NP_036441.1	ILMN_1814790	0004220209	I	8664	GGACGGTTCGAGCTATGAAATGTTGAGGACACCTACACGTGATTCTGGAG	11	-	69991673-69991722	11q13.3d	Homo sapiens SH3 and multiple ankyrin repeat domains 2 (SHANK2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11583995] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence NAS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Functions as a physical support bridging the N-methyl-D-aspartate receptor-PSD-95-GKAP complex and the mGluR-Homer complex, which are involved in receptor signaling in synapses [goid 30160] [pmid 10506216] [evidence NAS]	ProSAP1; CTTNBP1; CORTBP1; SPANK-3; SHANK	ProSAP1; CTTNBP1; CORTBP1; SPANK-3; SHANK
Homo sapiens	RefSeq	NM_005176.4	ILMN_137008	ATP5G2	NM_005176.4	NM_005176.4		517	50593531	NM_005176.4	ATP5G2	NP_005167.1	ILMN_1660577	0007330612	A	215	TCAGCAGCTTGGCAGTCTCATGTCCCCTTACCTCACTTGTCTCTAGCCGC	12	-	52349338-52349387	12q13.13f	Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9), isoform 2 (ATP5G2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 8328972] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8328972] [evidence NAS]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]		
Homo sapiens	RefSeq	NM_006275.4	ILMN_24964	SFRS6	NM_006275.4	NM_006275.4		6431	38158029	NM_006275.4	SFRS6	NP_006266.2	ILMN_1697469	0003060110	S	3623	GCCTACTTTGACTTTTACGTTCCCATTCCTGTGTTACCACCTTCCTCCCG	20	+	41525549-41525598	20q13.11b	Homo sapiens splicing factor, arginine/serine-rich 6 (SFRS6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [pmid 7556075] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	B52; MGC5045; SRP55	B52; MGC5045; SRP55
Homo sapiens	RefSeq	NM_178138.2	ILMN_137654	LHX3	NM_178138.2	NM_178138.2		8022	30089941	NM_178138.2	LHX3	NP_835258.1	ILMN_1701340	0007550056	A	2030	GGCTGGCCTGTGTGTAAGTCAAAGTCACTCCCGCAAACCTGAATCTCGAG	9	-	138228012-138228061	9q34.3d	Homo sapiens LIM homeobox 3 (LHX3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10598593] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10598593] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10903894] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10598593] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	M2-LHX3; DKFZp762A2013	M2-LHX3; DKFZp762A2013
Homo sapiens	RefSeq	XM_001722508.1	ILMN_353099	LOC100127983	XM_001722508.1	XM_001722508.1		100127983	169173368	XM_001722508.1	LOC100127983	XP_001722560.1	ILMN_3273885	0006510685	M	200	GCTTCAACCAGCAAGACCTGTTCGTCATCTGACTTCTCCCCCAGGAGCAG				8q21.3e	PREDICTED: Homo sapiens hypothetical protein LOC100127983 (LOC100127983), mRNA.					
Homo sapiens	RefSeq	NM_004810.2	ILMN_5990	GRAP2	NM_004810.2	NM_004810.2		9402	19913386	NM_004810.2	GRAP2	NP_004801.1	ILMN_1778143	0001580184	S	1281	TGTCTGGAGCTGCCCACAAGAAAGAGGGCAAGGAAAAAAGGCTGGACTCC	22	+	38697059-38697108	22q13.1e	Homo sapiens GRB2-related adaptor protein 2 (GRAP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9878555] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17652306] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11607830] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11048639] [evidence EXP]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 9878555] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9878555] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9878555] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12359715] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GRBLG; GRB2L; GRAP-2; Mona; GADS; GRPL; Grf40; GRID; P38; GrbX	GRB2L; GADS; GRPL; Grf40; GRID; GrbX; GRBLG; GRAP-2; Mona; P38
Homo sapiens	RefSeq	NM_080703.1	ILMN_3537	BAT3	NM_080703.1	NM_080703.1		7917	18375631	NM_080703.1	BAT3	NP_542434.1	ILMN_2390416	0005340382	A	3512	CGAGAGCCTGAGCCGGGACCTGGAGGCACCAGAGGTTCAGGAGAGCTACA	6	-	31715263-31715312	6p21.33a	Homo sapiens HLA-B associated transcript 3 (BAT3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	G3; D6S52E	G3; D6S52E
Homo sapiens	RefSeq	NM_207474.1	ILMN_25500	FLJ42953	NM_207474.1	NM_207474.1		400892	46409577	NM_207474.1	FLJ42953	NP_997357.1	ILMN_2067334	0001820446	S	442	TGGCGGCCAGCGCTGTGGGTGTGACGATGATGACAAGCCTAAACTGCGCA	22	+	19802352-19802377:19802378-19802401	22q11.21e-q11.21f	Homo sapiens FLJ42953 protein (FLJ42953), mRNA.				FLJ36027	FLJ36027
Homo sapiens	RefSeq	NR_002951.1	ILMN_174098	SNORA2B	NR_002951.1	NR_002951.1		677794	91680818	NR_002951.1	SNORA2B		ILMN_3249538	0005390767	S	7	CTGAATCAAGGCCAGCAGTTTGCTGAAGCTGTTGGTTTCAAGCAGGAGCC	12	-	49061320-49061369	12q13.11c	Homo sapiens small nucleolar RNA, H/ACA box 2B (SNORA2B), small nucleolar RNA.				ACA2b	ACA2b
Homo sapiens	Unigene	Hs.581788	ILMN_133969	HS.581788	Hs.581788		Hs.581788		3400050	AI073406			ILMN_1859493	0002070128	S	369	CAATTCCACCAGCACTGTATGAGTGATCCACTTTCCCCATGTCCACACCG	4	+	121181114-121181163		ov46b05.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1640337 3 similar to contains L1.t1 L1 repetitive element ;, mRNA sequence					
Homo sapiens	Unigene	Hs.543196	ILMN_106841	HS.543196	Hs.543196		Hs.543196		40676722	CK429537			ILMN_1887099	0006550538	S	48	CTCATTAACAGTGATGACAGATTGCAGGGGCTCTAAGACAGCCTCATGCC	3	-	36668842-36668891		oj38a03.y1 Human lacrimal gland, unamplified: oj Homo sapiens cDNA clone oj38a03 5, mRNA sequence					
Homo sapiens	RefSeq	NM_080864.2	ILMN_14002	RLN3	NM_080864.2	NM_080864.2		117579	56699421	NM_080864.2	RLN3	NP_543140.1	ILMN_1717278	0006180240	S	172	CTGGCCCACGAGGCTATGGGAGATACCTTCCCGGATGCAGATGCTGATGA	19	+	14000188-14000206:14002522-14002552	19p13.12c	Homo sapiens relaxin 3 (RLN3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	H3; ZINS4; insl7; RXN3	H3; ZINS4; insl7; RXN3
Homo sapiens	RefSeq	NM_004556.2	ILMN_164536	NFKBIE	NM_004556.2	NM_004556.2		4794	71274108	NM_004556.2	NFKBIE	NP_004547.2	ILMN_1717313	0000540139	S	2468	GAAGAGCATGGGGCAATAAACCAGCACAGTCTCTGACCACTTGGAGCGTC	6	-	44333944-44333993	6p21.1b	Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon (NFKBIE), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9135156] [evidence TAS]	The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [pmid 9135156] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16716191] [evidence IPI]	IKBE	IKBE
Homo sapiens	RefSeq	NM_016348.1	ILMN_21073	C5ORF4	NM_016348.1	NM_016348.1		10826	7705942	NM_016348.1	C5orf4	NP_057432.1	ILMN_1673654	0001470309	I	41	TACCCAACTAAGTCCCTTCATCTCCCTGGACCCTGCCTTCAATCATCCCT	5	-	154181189-154181238	5q33.2b	Homo sapiens chromosome 5 open reading frame 4 (C5orf4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	FLJ13758	FLJ13758
Homo sapiens	RefSeq	XM_375152.3	ILMN_46003	LOC400304	XM_375152.3	XM_375152.3		400304	89037939	XM_375152.3	LOC400304	XP_375152.2	ILMN_1748374	0006180497	I	5162	TACTGAAAGACTTTTGCCTAAAGTGGCATTATTGACTGCTGGTGTGATGA	15	+	19040952-19041001		PREDICTED: Homo sapiens similar to Golgi autoantigen, golgin subfamily A member 2 (Golgi matrix protein GM130), transcript variant 1 (LOC400304), mRNA.					
Homo sapiens	RefSeq	XR_041007.1	ILMN_340921	LOC728264	XR_041007.1	XR_041007.1		728264	169168115	XR_041007.1	LOC728264		ILMN_3206352	0000510564	A	961	AGCAGCCACAGAAAGAAGGGCCTCGTTAAGAAGTGGAACCTGGGACCCCC				5q33.1b	PREDICTED: Homo sapiens misc_RNA (LOC728264), miscRNA.					
Homo sapiens	RefSeq	NR_029949.1	ILMN_387874	MIR18B	NR_029949.1	NR_029949.1		574033	262205361	NR_029949.1	MIR18B		ILMN_3308015	0001740554	S	20	GCAGTTAGTGAAGCAGCTTAGAATCTACTGCCCTAAATGCCCCTTCTGGC				Xq26.2b	Homo sapiens microRNA 18b (MIR18B), microRNA.					
Homo sapiens	RefSeq	NM_001006635.1	ILMN_163263	MTX2	NM_001006635.1	NM_001006635.1		10651	54792076	NM_001006635.1	MTX2	NP_001006636.1	ILMN_1799466	0004540615	I	403	ATCTGCATGTACTTTAAAGAAATACTTTTGAGTCGGTGGACTGAACATGA	2	+	176843331-176843380	2q31.1i	Homo sapiens metaxin 2 (MTX2), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10381257] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Transport of substances into, out of or within a mitochondrion [goid 6839] [pmid 10381257] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		MGC111067	MGC111067
Homo sapiens	RefSeq	NM_058169.2	ILMN_170727	LOH12CR1	NM_058169.2	NM_058169.2		118426	31377627	NM_058169.2	LOH12CR1	NP_477517.1	ILMN_1651268	0005900035	S	1834	GCAAGGACTGGAGAAGCAAAGAGTGGAATGTGAGGAGCAGACCTAGGCAG	12	+	12510889-12510938	12p13.2a	Homo sapiens loss of heterozygosity, 12, chromosomal region 1 (LOH12CR1), mRNA.				LOH1CR12	LOH1CR12
Homo sapiens	RefSeq	NM_000749.2	ILMN_180506	CHRNB3	NM_000749.3	NM_000749.3		1142	98986442	NM_000749.3	CHRNB3	NP_000740.1	ILMN_1736218	0004730626	S	1810	TACTTGGTGGAGGAACACCTCCTAGAAGCAGCAGGCCTCGGTGGTGGGGG	8	+	42592066-42592115	8p11.21a	Homo sapiens cholinergic receptor, nicotinic, beta 3 (CHRNB3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 7690916] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8906617] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7690916] [evidence TAS]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [pmid 7690916] [evidence TAS]	 [goid 4889] [pmid 7690916] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [pmid 7690916] [evidence TAS]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]		
Homo sapiens	RefSeq	NR_002223.1	ILMN_18175	TPRXL	NR_002223.1	NR_002223.1		348825	60593092	NR_002223.1	TPRXL		ILMN_2120636	0002690347	S	1321	AGGCCCACTCAAAAGCCAAGGCCCAATCCCAGGTCCAGGCTCAATCCTAG	3	+	14081637-14081686	3p25.1b	Homo sapiens tetra-peptide repeat homeobox-like (TPRXL) on chromosome 3.				FLJ35107	FLJ35107
Homo sapiens	RefSeq	NR_002223.1	ILMN_18175	TPRXL	NR_002223.1	NR_002223.1		348825	60593092	NR_002223.1	TPRXL		ILMN_2120631	0007550731	S	1685	GTCTGCAAAGTCCTGCGGATACCAGTGGACCTGGAGTGGCTGGTTGGTCT	3	+	14082001-14082050	3p25.1b	Homo sapiens tetra-peptide repeat homeobox-like (TPRXL) on chromosome 3.				FLJ35107	FLJ35107
Homo sapiens	RefSeq	XM_001722110.1	ILMN_352137	ZNF840	XM_001722110.1	XM_001722110.1		100130863	169214555	XM_001722110.1	ZNF840	XP_001722162.1	ILMN_3272912	0004640156	M	2692	GCCCTTTCCATGTAATGAATGTAAGAAAGCCTTTGCCCAGCGCATGGATC	20	+	44554176-44554225	20q13.12c	PREDICTED: Homo sapiens zinc finger protein 840 (ZNF840), mRNA.					
Homo sapiens	RefSeq	NM_000957.2	ILMN_7473	PTGER3	NM_000957.2	NM_000957.2		5733	38505171	NM_000957.2	PTGER3	NP_000948.2	ILMN_1690202	0005810497	I	1360	GTGATTGATCCTTCAAGGTTCTGTGCTCAGCCCTTCCGTTGGTTCTTGGA	1	-	71104030-71104079	1p31.1j	Homo sapiens prostaglandin E receptor 3 (subtype EP3) (PTGER3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9073510] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 10336471] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10336471] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8307176] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IEA]; The synthesis of RNA on a template of DNA [goid 6351] [pmid 10336471] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8307176] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 10947062] [evidence TAS]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IEA]; The process of renal water excretion [goid 30146] [evidence IEA]	Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 9073510] [evidence NAS]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [pmid 10336471] [evidence TAS]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 10947062] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EP3-III; EP3-II; EP3e; MGC27302; MGC141828; EP3-I; MGC141829; EP3; EP3-IV	EP3-III; EP3-II; EP3e; MGC27302; MGC141828; EP3-I; MGC141829; EP3; EP3-IV
Homo sapiens	RefSeq	NM_031293.1	ILMN_23671	PMFBP1	NM_031293.1	NM_031293.1		83449	13775211	NM_031293.1	PMFBP1	NP_112583.1	ILMN_1713867	0007100484	S	3169	GCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTGAGTTCCC	16	-	70710675-70710724	16q22.3a	Homo sapiens polyamine modulated factor 1 binding protein 1 (PMFBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			DKFZP434G131; FLJ40146	DKFZP434G131; FLJ40146
Homo sapiens	RefSeq	XM_001715275.1	ILMN_352167	LOC100129571	XM_001715275.1	XM_001715275.1		100129571	169167669	XM_001715275.1	LOC100129571	XP_001715327.1	ILMN_3234410	0002490326	I	811	GGCCACTGCAGCCGCGGGGCACCGGCTCTGGCGCCTCCGAAACTTTCTCC	5	-	65928244-65928293	5q12.3c	PREDICTED: Homo sapiens similar to hCG1646049 (LOC100129571), mRNA.					
Homo sapiens	RefSeq	NM_005655.1	ILMN_2466	KLF10	NM_005655.1	NM_005655.1		7071	5032176	NM_005655.1	KLF10	NP_005646.1	ILMN_2411897	0002190470	A	1539	ACCTCCAACCCCTGCTCCCACACAGTGACAGACCGGAAAGTGAAGAGTCA	8	-	103731513-103731535:103731536-103731562	8q22.3b	Homo sapiens Kruppel-like factor 10 (KLF10), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9748269] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9748269] [evidence TAS]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10816551] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 10816551] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8532536] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9748269] [evidence TAS]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9748269] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10816551] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10976766] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TIEG; EGRA; TIEG1	TIEG; EGRA; TIEG1
Homo sapiens	RefSeq	NM_005655.1	ILMN_2466	KLF10	NM_005655.1	NM_005655.1		7071	5032176	NM_005655.1	KLF10	NP_005646.1	ILMN_1659122	0005720184	I	108	GGCCAAGCAGCCAACCATGCTCAACTTCGGTGCCTCTCTCCAGCAGACTG	8	-	103736971-103737005:103737006-103737020	8q22.3b	Homo sapiens Kruppel-like factor 10 (KLF10), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9748269] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9748269] [evidence TAS]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10816551] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 10816551] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8532536] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9748269] [evidence TAS]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9748269] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10816551] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10976766] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TIEG; EGRA; TIEG1	TIEG; EGRA; TIEG1
Homo sapiens	RefSeq	NM_001042462.1	ILMN_175482	TRAPPC5	NM_001042462.1	NM_001042462.1		126003	109698598	NM_001042462.1	TRAPPC5	NP_001035927.1	ILMN_2372639	0007610593	A	378	ACAAGCTGGAGCAGGCCAACGATGACGCGCGCACCTTCTACATCATCGAG	19	+	7653447-7653496	19p13.2e	Homo sapiens trafficking protein particle complex 5 (TRAPPC5), transcript variant 3, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC52424	MGC52424
Homo sapiens	RefSeq	NM_003974.2	ILMN_21820	DOK2	NM_003974.2	NM_003974.2		9046	41406049	NM_003974.2	DOK2	NP_003965.2	ILMN_1805903	0001240369	I	477	GAGCCGGCCCTGCATGGAGGAAAATGAATTGTACAGCAGCGCAGTCACAG	8	-	21824314-21824314:21825358-21825406	8p21.3b	Homo sapiens docking protein 2, 56kDa (DOK2), mRNA.		Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10799545] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IEA]	 [goid 5069] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]	p56DOK; p56dok-2	p56DOK; p56dok-2
Homo sapiens	RefSeq	NM_201349.1	ILMN_21820	DOK2	NM_003974.2	NM_003974.2		9046	41406049	NM_003974.2	DOK2	NP_003965.2	ILMN_1791211	0006220538	A	1577	GCTGAGGAGGAACCTGGGGCATTTAGGGCAGAGGACAAAAGGATGTCAGC	8	-	21822473-21822522	8p21.3b	Homo sapiens docking protein 2, 56kDa (DOK2), mRNA.		Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10799545] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IEA]	 [goid 5069] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]	p56DOK; p56dok-2	p56DOK; p56dok-2
Homo sapiens	RefSeq	NR_030227.1	ILMN_387924	MIR450A2	NR_030227.1	NR_030227.1		574505	262205480	NR_030227.1	MIR450A2		ILMN_3309483	0001340441	S	32	TGTTCCTAATATGTAATATAAATGTATTGGGGACATTTTGCATTCATAGT				Xq26.3a	Homo sapiens microRNA 450a-2 (MIR450A2), microRNA.					
Homo sapiens	RefSeq	NM_021016.2	ILMN_14040	PSG3	NM_021016.3	NM_021016.3		5671	109240545	NM_021016.3	PSG3	NP_066296.2	ILMN_1693530	0001660221	S	1827	TGCTCCCTAAGTGCCCCAGAATTGGGAAACTATTCAGGAGTATTCATATG	19	-	47917665-47917714	19q13.31a	Homo sapiens pregnancy specific beta-1-glycoprotein 3 (PSG3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 2341148] [evidence TAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 3265688] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 3265688] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 2341148] [evidence TAS]			
Homo sapiens	RefSeq	NM_002785.2	ILMN_14040	PSG3	NM_021016.3	NM_021016.3		5671	109240545	NM_021016.3	PSG3	NP_066296.2	ILMN_1685312	0003440095	I	438	TTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAGGACGCAGGAT	19	-	47934790-47934839	19q13.31a	Homo sapiens pregnancy specific beta-1-glycoprotein 3 (PSG3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 2341148] [evidence TAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 3265688] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 3265688] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 2341148] [evidence TAS]			MGC22484; PSG14; PSG13
Homo sapiens	Unigene	Hs.544137	ILMN_107607	HS.544137	Hs.544137		Hs.544137		7279180	AW592010			ILMN_1831214	0005390465	S	144	GCTGACATTAACTTCAGTTTTCACCAGTGAGCCCCACTAAACTCCCCTTC	5	+	51613762-51613811		hf37c01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2934048 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001726599.1	ILMN_348630	LOC100131831	XM_001726599.1	XM_001726599.1		100131831	169213724	XM_001726599.1	LOC100131831	XP_001726651.1	ILMN_3215006	0001300484	A	570	TGCCCATCGGGGCGGTTGTTATTGTCGCTGCACTGGGATTGGGGCAGAGG				19p13.12c	PREDICTED: Homo sapiens hypothetical protein LOC100131831 (LOC100131831), mRNA.					
Homo sapiens	RefSeq	NM_006117.2	ILMN_7427	PECI	NM_006117.2	NM_006117.2		10455	45643118	NM_006117.2	PECI	NP_006108.2	ILMN_2384536	0006200133	A	628	GATCTGACTAACTTCACTGATATTCCCCCTGGTGGAGTAGAGGAGAAAGC	6	-	4126392-4126441	6p25.2a	Homo sapiens peroxisomal D3,D2-enoyl-CoA isomerase (PECI), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10419495] [evidence TAS]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 10419495] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; Catalysis of the reaction: 3-cis-dodecenoyl-CoA = 2-trans-dodecenoyl-CoA [goid 4165] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	DRS1; KIAA0536; HCA88; dJ1013A10.3; ACBD2	DRS1; KIAA0536; HCA88; dJ1013A10.3; ACBD2
Homo sapiens	RefSeq	NM_006117.2	ILMN_7427	PECI	NM_006117.2	NM_006117.2		10455	45643118	NM_006117.2	PECI	NP_006108.2	ILMN_1761131	0000010594	A	1208	TGTGATGACCACTACAGCAGAGTAAAGCATGTCCAAGGAAGGATGTGCTG	6	-	4116062-4116107:4116108-4116111	6p25.2a	Homo sapiens peroxisomal D3,D2-enoyl-CoA isomerase (PECI), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10419495] [evidence TAS]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 10419495] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; Catalysis of the reaction: 3-cis-dodecenoyl-CoA = 2-trans-dodecenoyl-CoA [goid 4165] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	DRS1; KIAA0536; HCA88; dJ1013A10.3; ACBD2	DRS1; KIAA0536; HCA88; dJ1013A10.3; ACBD2
Homo sapiens	RefSeq	XM_001726257.1	ILMN_336645	LOC100129112	XM_001726257.1	XM_001726257.1		100129112	169211920	XM_001726257.1	LOC100129112	XP_001726309.1	ILMN_3254973	0006380279	M	482	TCCTTGCAGAGCAGGGCTACACCCATAGGCAGTGTGACCAAAGTAACCCC				17q23.2c	PREDICTED: Homo sapiens hypothetical protein LOC100129112 (LOC100129112), mRNA.					
Homo sapiens	RefSeq	XR_015173.2	ILMN_174923	LOC727963	XR_015173.2	XR_015173.2		727963	169208483	XR_015173.2	LOC727963		ILMN_3214332	0006110180	A	259	ATGCCCGGTGACAGACTCGGCGCCGGCTTCCGGCGCCGTAAGAGAAGCGT	15	+	82539930-82539979	15q25.2b	PREDICTED: Homo sapiens similar to elongation factor Tu GTP binding domain containing 1 (LOC727963), mRNA.					
Homo sapiens	RefSeq	NM_014178.6	ILMN_18387	STXBP6	NM_014178.6	NM_014178.6		29091	46048194	NM_014178.6	STXBP6	NP_054897.4	ILMN_1750912	0002370092	S	1048	GGTAGCCAGCACAGCGTCAGAAAAATGCACCTTCTTCCAGATCCTCCACC	14	-	25325210-25325259	14q12a	Homo sapiens syntaxin binding protein 6 (amisyn) (STXBP6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		amisyn; FLJ39638; HSPC156	amisyn; FLJ39638; HSPC156
Homo sapiens	RefSeq	NM_014178.6	ILMN_18387	STXBP6	NM_014178.6	NM_014178.6		29091	46048194	NM_014178.6	STXBP6	NP_054897.4	ILMN_2172969	0003400379	S	1906	GATTTTGCTCCTTGCATAGTAATCTTTTGCATGAACCATCACCAGCGTTC	14	-	25281307-25281356	14q12a	Homo sapiens syntaxin binding protein 6 (amisyn) (STXBP6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		amisyn; FLJ39638; HSPC156	amisyn; FLJ39638; HSPC156
Homo sapiens	RefSeq	NM_004870.2	ILMN_28782	MPDU1	NM_004870.2	NM_004870.2		9526	116517312	NM_004870.2	MPDU1	NP_004861.2	ILMN_2070815	0002710019	S	626	TGCTGTTTGGGGGCTCCCTGGCCCGAATCTTCACTTCCATTCAGGAAACC	17	+	7431270-7431313:7431468-7431473	17p13.1d	Homo sapiens mannose-P-dolichol utilization defect 1 (MPDU1), mRNA.	The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11179430] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 11179430] [evidence NAS]; The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P [goid 6488] [pmid 11733564] [evidence TAS]; The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [pmid 11733564] [evidence IGI]; The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [pmid 11179430] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CDGIF; HBEBP2BPA; FLJ14836; SL15; PQLC5; Lec35	CDGIF; FLJ14836; SL15; PQLC5; Lec35
Homo sapiens	RefSeq	XM_001724221.1	ILMN_348777	LOC100132620	XM_001724221.1	XM_001724221.1		100132620	169209814	XM_001724221.1	LOC100132620	XP_001724273.1	ILMN_3246585	0006480072	S	3010	GTTCAAGTGATTCCCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGC	16	-	18321665-18321714	16p12.3b	PREDICTED: Homo sapiens similar to LOC339047 protein (LOC100132620), mRNA.					
Homo sapiens	RefSeq	NM_006844.3	ILMN_3466	ILVBL	NM_006844.3	NM_006844.3		10994	29171690	NM_006844.3	ILVBL	NP_006835.2	ILMN_1769451	0007320750	A	2174	GAGGCTCTCTTGTGAGCTCTTGGACCCTCCTCTTCACGGACCCAACTGTG	19	-	15225859-15225908	19p13.12b	Homo sapiens ilvB (bacterial acetolactate synthase)-like (ILVBL), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]	FLJ39061; 209L8; AHAS; MGC19535; MGC1269; ILV2H	FLJ39061; 209L8; AHAS; MGC19535; MGC1269; ILV2H
Homo sapiens	RefSeq	NM_006844.3	ILMN_3466	ILVBL	NM_006844.3	NM_006844.3		10994	29171690	NM_006844.3	ILVBL	NP_006835.2	ILMN_1759419	0004890382	I	1881	TGCTGCTCTCACGGGAGAACGAGGATCAGGTGGTCAAGGTGCTGCACGAT	19	-	15226152-15226201	19p13.12b	Homo sapiens ilvB (bacterial acetolactate synthase)-like (ILVBL), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]	FLJ39061; 209L8; AHAS; MGC19535; MGC1269; ILV2H	FLJ39061; 209L8; AHAS; MGC19535; MGC1269; ILV2H
Homo sapiens	RefSeq	NM_020216.3	ILMN_22895	RNPEP	NM_020216.3	NM_020216.3		6051	40316914	NM_020216.3	RNPEP	NP_064601.3	ILMN_1738347	0005570601	S	2225	CACTGCAGGGCAGCGGGTATTCTCCTCCCCACCTAAGTCTCTGGGAAGAA	1	+	200241710-200241759	1q32.1c	Homo sapiens arginyl aminopeptidase (aminopeptidase B) (RNPEP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10467730] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10467730] [evidence TAS]	The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 12119107] [evidence NAS]; Catalysis of the reaction: an epoxide + H2O = a glycol [goid 4301] [pmid 12119107] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [pmid 12119107] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 12119107] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZP547H084	DKFZP547H084
Homo sapiens	RefSeq	XM_498431.2	ILMN_182439	BICC1	NM_001080512.1	NM_001080512.1		80114	122937471	NM_001080512.1	BICC1	NP_001073981.1	ILMN_1719570	0001940270	A	2849	TCCTGGAAGGTGGAGCGAGTGGAAGGCTACCCCGTCAGTATCACTCAGAC	10	+	60258581-60258630	10q21.1f	Homo sapiens bicaudal C homolog 1 (Drosophila) (BICC1), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	NM_015303.3	ILMN_27874	VPS8	NM_015303.3	NM_015303.3		23355	112181165	NM_015303.3	VPS8	NP_056118.2	ILMN_2415170	0006420538	A	4897	GTATAACTGAAGCATGCCTTGGAGAGAGCAGACACTGTGGGGGCCAGGGC	3	+	184770258-184770307	3q27.2a	Homo sapiens vacuolar protein sorting 8 homolog (S. cerevisiae) (VPS8), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0804; FLJ32099	FLJ32099
Homo sapiens	RefSeq	NM_015303.2	ILMN_27874	VPS8	NM_015303.3	NM_015303.3		23355	112181165	NM_015303.3	VPS8	NP_056118.2	ILMN_1678268	0002140538	A	4618	GACTCCCAGTCTTCTCCACATTGCTGTCATGGCGTCAGTTCACCAGACTC	3	+	184769979-184770028	3q27.2a	Homo sapiens vacuolar protein sorting 8 homolog (S. cerevisiae) (VPS8), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0804; FLJ32099	FLJ32099
Homo sapiens	RefSeq	XM_001717356.1	ILMN_345783	LOC728262	XM_001717356.1	XM_001717356.1		728262	169170275	XM_001717356.1	LOC728262	XP_001717408.1	ILMN_3211615	0000050445	A	410	AGCGGCGCCCGGGTTCCGGCACAGACGGCCTGCGGCTCCAGGGGGCGGAG	7	-	142356-142405	3q29i	PREDICTED: Homo sapiens hypothetical LOC728262 (LOC728262), mRNA.					
Homo sapiens	RefSeq	NM_018665.1	ILMN_10035	DDX43	NM_018665.1	NM_018665.1		55510	10346128	NM_018665.1	DDX43	NP_061135.1	ILMN_1813893	0004640735	S	1886	GGGCGCACGGGAAGAGCAGGGAGGACTGGTGTTTCCATTACAACTTTGAC	6	+	74181113-74181130:74181941-74181972	6q13c	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 (DDX43), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10919659] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 10919659] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp434H2114; HAGE	DKFZp434H2114; HAGE
Homo sapiens	RefSeq	XM_926183.1	ILMN_36805	LOC642761	XM_926183.1	XM_926183.1		642761	89040346	XM_926183.1	LOC642761	XP_931276.1	ILMN_1695251	0007210328	S	684	GATCCCCCACCTTCAGAACTTAGCGAACCAAGCATCTCTCCAGTGCAAGG	16	-	34992216-34992265		PREDICTED: Homo sapiens hypothetical protein LOC642761 (LOC642761), mRNA.					
Homo sapiens	RefSeq	NM_001024649.1	ILMN_20955	CANX	NM_001024649.1	NM_001024649.1		821	66933004	NM_001024649.1	CANX	NP_001019820.1	ILMN_2401057	0005860477	A	4746	AAGCAGGACTGCATTATGGCACTTTTGCCTTGGTGGCCCACTTTCTCCAT	5	+	179091094-179091143	5q35.3e	Homo sapiens calnexin (CANX), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15467828] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15467828] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 14966132] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 15467828] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The regulated release of proteins from a cell or group of cells [goid 9306] [pmid 8055875] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8136357] [evidence TAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence NAS]	P90; IP90; FLJ26570; CNX	P90; IP90; FLJ26570; CNX
Homo sapiens	RefSeq	XM_001715620.1	ILMN_344867	LOC100132782	XM_001715620.1	XM_001715620.1		100132782	169176416	XM_001715620.1	LOC100132782	XP_001715672.1	ILMN_3243562	0006350408	S	626	CTCCAAATGTCAAAGGCAAGCTGGGCATCATGATCTGGCATAAAGAACCC	9	+	74940680-74940729	9q21.13a	PREDICTED: Homo sapiens hypothetical LOC100132782 (LOC100132782), mRNA.					
Homo sapiens	RefSeq	NM_001263.2	ILMN_20950	CDS1	NM_001263.2	NM_001263.2		1040	22035623	NM_001263.2	CDS1	NP_001254.2	ILMN_1801476	0005860010	S	2275	GCAAGGCACAATAGGAAGTCAGTTCTCCTGCACTTCCTCCTCATGTAGTC	4	+	85789254-85789303	4q21.23b	Homo sapiens CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 (CDS1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8863531] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9115637] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9806839] [evidence TAS]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine [goid 4142] [pmid 9115637] [evidence TAS]; Catalysis of the reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol [goid 4605] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CDS	CDS
Homo sapiens	RefSeq	NR_030302.1	ILMN_388023	MIR576	NR_030302.1	NR_030302.1		693161	262205852	NR_030302.1	MIR576		ILMN_3308602	0004290438	S	5	TCCAACGAGGATTCTAATTTCTCCACGTCTTTGGTAATAAGGTTTGGCAA				4q25c	Homo sapiens microRNA 576 (MIR576), microRNA.					
Homo sapiens	RefSeq	XM_927166.1	ILMN_39157	LOC643900	XM_927166.1	XM_927166.1		643900	88953795	XM_927166.1	LOC643900	XP_932259.1	ILMN_1662680	0000670468	S	1	ATGGTCCTGGGGATGCTGGTGTCTGAGATCATGACTATGCCTGTGCTGAG	2	+	173338531-173338580		PREDICTED: Homo sapiens similar to ret finger protein-like 2 (LOC643900), mRNA.					
Homo sapiens	RefSeq	XM_940587.1	ILMN_39119	LOC651436	XM_940587.1	XM_940587.1		651436	89039139	XM_940587.1	LOC651436	XP_945680.1	ILMN_1769277	0002120040	S	267	ACACACAGTTATCGTGAATGGCCCCAGAGGAACCCTGCGGAGGGACTTCA					PREDICTED: Homo sapiens similar to ribosomal protein L9 (LOC651436), mRNA.					
Homo sapiens	RefSeq	XM_931398.1	ILMN_33589	LOC643197	XM_931398.1	XM_931398.1		643197	89028030	XM_931398.1	LOC643197	XP_936491.1	ILMN_1797942	0006270685	S	241	ACAAAATGAAGGGATTTTGACACTGAGCAAAAAGTGTAAGTGGAAGAAGA	8	+	39550039-39550084:39552257-39552260		PREDICTED: Homo sapiens hypothetical protein LOC643197 (LOC643197), mRNA.					
Homo sapiens	RefSeq	NR_029701.1	ILMN_388914	MIR146A	NR_029701.1	NR_029701.1		406938	262205399	NR_029701.1	MIR146A		ILMN_3308123	0007510110	S	33	CCATGGGTTGTGTCAGTGTCAGACCTCTGAAATTCAGTTCTTCAGCTGGG				5q33.3d	Homo sapiens microRNA 146a (MIR146A), microRNA.					
Homo sapiens	RefSeq	NM_198289.1	ILMN_5808	CIDEA	NM_198289.1	NM_198289.1		1149	38158010	NM_198289.1	CIDEA	NP_938031.1	ILMN_2390318	0002140278	A	575	GCCACCATGTATGAGATGTACTCCGTGTCCTACGACATCCGGTGCACGGG	18	+	12264206-12264255	18p11.21e	Homo sapiens cell death-inducing DFFA-like effector a (CIDEA), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 9564035] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 9564035] [evidence TAS]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IEA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [pmid 15919794] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [pmid 15919794] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids [goid 50995] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CIDE-A	CIDE-A
Homo sapiens	RefSeq	NM_198289.1	ILMN_5808	CIDEA	NM_198289.1	NM_198289.1		1149	38158010	NM_198289.1	CIDEA	NP_938031.1	ILMN_2284810	0004050079	I	6	GAACCCCGAGCAAAGCTTCCGCGATGCGAGGGGACCGGGCTTCTGGGGGT	18	+	12244793-12244815:12244816-12244842	18p11.21e	Homo sapiens cell death-inducing DFFA-like effector a (CIDEA), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 9564035] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 9564035] [evidence TAS]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IEA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [pmid 15919794] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [pmid 15919794] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids [goid 50995] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CIDE-A	CIDE-A
Homo sapiens	RefSeq	NM_198289.1	ILMN_5808	CIDEA	NM_198289.1	NM_198289.1		1149	38158010	NM_198289.1	CIDEA	NP_938031.1	ILMN_2284804	0001110609	I	1	CCCAGGAACCCCGAGCAAAGCTTCCGCGATGCGAGGGGACCGGGCTTCTG	18	+	12244788-12244815:12244816-12244837	18p11.21e	Homo sapiens cell death-inducing DFFA-like effector a (CIDEA), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 9564035] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 9564035] [evidence TAS]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IEA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [pmid 15919794] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [pmid 15919794] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids [goid 50995] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CIDE-A	CIDE-A
Homo sapiens	RefSeq	NM_017639.2	ILMN_8682	DCHS2	NM_017639.2	NM_017639.2		54798	47059045	NM_017639.2	DCHS2	NP_060109.2	ILMN_1731741	0006620148	I	8543	AGGTGCCTCCGAAACACCCACGCTCTCCCATCCCCTACCATCTTGGTTCT	4	-	155375296-155375345	4q32.1a	Homo sapiens dachsous 2 (Drosophila) (DCHS2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ20047; PCDHJ; CDHJ; PCDH23; CDH27	FLJ20047; PCDHJ; CDHJ; PCDH23; CDH27
Homo sapiens	RefSeq	NM_015473.2	ILMN_308849	HEATR5A	NM_015473.2	NM_015473.2		25938	163838654	NM_015473.2	HEATR5A	NP_056288.1	ILMN_3249669	0005360129	S	4508	ACCTGGGGGCCAGTTATCTTCGACAGTTGCAGCTTCCCTACAGGCTCTAA	14	-	31771605-31771654	14q12e	Homo sapiens HEAT repeat containing 5A (HEATR5A), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC72028; DKFZp781E083; C14orf125	MGC72028; DKFZp781E083; C14orf125
Homo sapiens	RefSeq	XM_001719960.1	ILMN_338904	LOC100128163	XM_001719960.1	XM_001719960.1		100128163	169213172	XM_001719960.1	LOC100128163	XP_001720012.1	ILMN_3257564	0006560435	M	487	CCTTTCCCTGGAATGATCCGGAATGGACGACACCTGAGCTCTCTCTGCCA				18q21.32a	PREDICTED: Homo sapiens hypothetical protein LOC100128163 (LOC100128163), mRNA.					
Homo sapiens	RefSeq	XM_932876.1	ILMN_40942	LOC653623	XM_932876.1	XM_932876.1		653623	89024772	XM_932876.1	LOC653623	XP_937969.1	ILMN_1806115	0003140601	S	61	GTCAAGCTGCTAACGAGACCCTTCGCTGACACTGTCGGCACCCCTCACCT	7	-	3095439-3095472:3095557-3095572		PREDICTED: Homo sapiens similar to caspase recruitment domain family, member 11 (LOC653623), mRNA.					
Homo sapiens	RefSeq	NM_031210.3	ILMN_6302	C14ORF156	NM_031210.3	NM_031210.3		81892	33667026	NM_031210.3	C14orf156	NP_112487.1	ILMN_1661945	0005290025	S	70	ATCAGCCGGTTGCTTTTGTGAGAAGAATTCCTTGGACTGCGGCGTCGAGT	14	+	77244257-77244304:77246934-77246935	14q24.3d	Homo sapiens chromosome 14 open reading frame 156 (C14orf156), mRNA.				DC50; SLIRP; PD04872	DC50; SLIRP; PD04872
Homo sapiens	Unigene	Hs.171171	ILMN_80303	HS.171171	Hs.171171		Hs.171171		30981369	CD237904			ILMN_1832879	0002060608	S	48	CATGCACGTCCCAGCGTGAGTGCCTGAATGGGTCTCTCAGGTCTGAACAG	22	-	30363533-30363582		FNPARC07 FNP Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_001014374.1	ILMN_1916	FAM99A	NM_001014374.1	NM_001014374.1		387742	62122874	NM_001014374.1	FAM99A	NP_001014396.1	ILMN_1670453	0003400156	S	1663	GGGTCTTGGGAGCTTCTGTCCCTTGCCCTCTCTTGTCCAGGTCAGCATCT	11	+	1645335-1645384	11p15.5b	Homo sapiens family with sequence similarity 99, member A (FAM99A), mRNA.				FLJ42833	FLJ42833
Homo sapiens	RefSeq	NM_001135865.1	ILMN_371643	LOC100132247	NM_001135865.1	NM_001135865.1		100132247	209529738	NM_001135865.1	LOC100132247	NP_001129337.1	ILMN_3246766	0006060014	S	1820	CTTCCGAGCGTCAGCTCACTGCCCTTCCACCCTCAGCAGATGATAATATC	16	+	22545845-22545894	16p12.1c	Homo sapiens similar to Uncharacterized protein KIAA0220 (LOC100132247), mRNA.					
Homo sapiens	RefSeq	NM_006433.2	ILMN_17459	GNLY	NM_006433.2	NM_006433.2		10578	7108343	NM_006433.2	GNLY	NP_006424.2	ILMN_1708779	0006580041	I	85	CCCATAAAACAGGGTGTGAAAGGCATCTCAGCGGCTGCCCCACCATGGCT	2	+	85775009-85775052:85775053-85775058	2p11.2f	Homo sapiens granulysin (GNLY), transcript variant NKG5, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2212946] [evidence TAS]	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 9756476] [evidence TAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IEA]		D2S69E; 519; LAG2; LAG-2; TLA519; NKG5	D2S69E; 519; LAG2; NKG5; LAG-2; TLA519
Homo sapiens	RefSeq	NM_003181.2	ILMN_9508	T	NM_003181.2	NM_003181.2		6862	19743811	NM_003181.2	T	NP_003172.1	ILMN_1794551	0000010719	S	1932	TTTCAAAGCAGTGGAGGAGCACACGGCACCTTTCCCCAGAGCCCCAGCAT	6	-	166571622-166571671	6q27b	Homo sapiens T, brachyury homolog (mouse) (T), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process by which the anatomical structures of the neural plate are generated and organized. Morphogenesis pertains to the creation of form. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue [goid 1839] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8963900] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [pmid 8963900] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [pmid 8963900] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [evidence IEA]; The process whose specific outcome is the progression of the notochord over time, from its formation to the mature structure. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 30903] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8963900] [evidence NAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	TFT; MGC104817	TFT; MGC104817
Homo sapiens	RefSeq	NM_033311.1	ILMN_1445	KCNK4	NM_033311.1	NM_033311.1		50801	15718768	NM_033311.1	KCNK4	NP_201568.1	ILMN_1801467	0004050187	I	168	TCTGTGGACAGTGCAGCTGGGGGCTTTATGGATCTTTGGGTGTGTAGGGG	11	+	63816874-63816923	11q13.1b	Homo sapiens potassium channel, subfamily K, member 4 (KCNK4), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10767409] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [pmid 10767409] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	TRAAK	TRAAK
Homo sapiens	RefSeq	NM_003386.1	ILMN_11574	ZAN	NM_003386.1	NM_003386.1		7455	16554448	NM_003386.1	ZAN	NP_003377.1	ILMN_2370857	0001660561	A	7901	CTGCTCAGGACCCAAGAGAGCAAGAGGAGCTGCGTTGCCAGGTCCTCAGT	7	+	100227987-100228036	7q22.1c	Homo sapiens zonadhesin (ZAN), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9126492] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [pmid 9126492] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 9126492] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_003386.1	ILMN_11574	ZAN	NM_003386.1	NM_003386.1		7455	16554448	NM_003386.1	ZAN	NP_003377.1	ILMN_2273902	0004040414	I	8105	CTCCCCTGGCTGACTGTGGCTGCACCAGCAATGGCATCTACTACCAGCTG	7	+	100229531-100229576:100229678-100229681	7q22.1c	Homo sapiens zonadhesin (ZAN), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9126492] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [pmid 9126492] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 9126492] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_173055.1	ILMN_11574	ZAN	NM_003386.1	NM_003386.1		7455	16554448	NM_003386.1	ZAN	NP_003377.1	ILMN_1692602	0002030017	A	8354	TCACCTGCGAGTGTGAAGTTGGTTACGGGGGAGGCCTGTGTATGGAGCCT	7	+	100230818-100230867	7q22.1c	Homo sapiens zonadhesin (ZAN), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9126492] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [pmid 9126492] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 9126492] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_496984.2	ILMN_39176	LOC441362	XM_496984.2	XM_496984.2		441362	89028180	XM_496984.2	LOC441362	XP_496984.2	ILMN_1779713	0001170376	S	4426	TCTTGGAAGGCCAAAGCTACTGAATTTAGCGAATTTGTGGAGGCATTGCC	8	-	86876241-86876290	8q21.2b	PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3 binding protein 1 (LOC441362), mRNA.					
Homo sapiens	Unigene	Hs.146949	ILMN_78410	HS.146949	Hs.146949		Hs.146949		27879288	BX113358			ILMN_1867321	0001850474	S	244	GGTACAGGATTGGCTGGGCTAAGGTGCCAACAGAGATCAGGAGAGGCTGG	3	-	49685717-49685766		BX113358 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998F085778, mRNA sequence					
Homo sapiens	Unigene	Hs.126678	ILMN_76305	HS.126678	Hs.126678		Hs.126678		5339103	AI791387			ILMN_1863228	0006510102	S	218	CTCAGTTGCTAAAGCAGGGAGAGGTTTCCTAGTCCGGTGTTCCGGCCGAC	1	-	16964548-16964552:16964559-16964603		oh02d10.y5 NCI_CGAP_Kid3 Homo sapiens cDNA clone IMAGE:1456627 5, mRNA sequence					
Homo sapiens	RefSeq	XM_929843.1	ILMN_27860	TMEM217	NM_145316.2	NM_145316.2		221468	31543075	NM_145316.2	TMEM217	NP_660359.2	ILMN_1651535	0006040553	S	782	ATGGTGGGCATCTTCTCTGTCCTTAATACCACCCAGTTCTTCATCTTTGA	6	-	37288649-37288698	6p21.2c	Homo sapiens transmembrane protein 217 (TMEM217), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			dJ355M6.2	
Homo sapiens	RefSeq	NM_145316.2	ILMN_27860	TMEM217	NM_145316.2	NM_145316.2		221468	31543075	NM_145316.2	TMEM217	NP_660359.2	ILMN_1756238	0005340161	S	1368	CCTCCCTACCCTGCCTGTCTTCTGTTGATGCTGCTTGGTTTGTCAGGGCT	6	-	37288063-37288112	6p21.2c	Homo sapiens transmembrane protein 217 (TMEM217), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			dJ355M6.2	dJ355M6.2
Homo sapiens	RefSeq	NM_145316.2	ILMN_27860	TMEM217	NM_145316.2	NM_145316.2		221468	31543075	NM_145316.2	TMEM217	NP_660359.2	ILMN_3237381	0003940128	S	1314	CCATGCCAGATGCCAGGAAAGGTGGGAGGGAATGGTGTTCCTCAACAATG	6	-	37288117-37288166	6p21.2c	Homo sapiens transmembrane protein 217 (TMEM217), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			dJ355M6.2	dJ355M6.2
Homo sapiens	RefSeq	NR_029609.1	ILMN_388185	MIR10B	NR_029609.1	NR_029609.1		406903	262206216	NR_029609.1	MIR10B		ILMN_3309484	0004120594	S	46	GTGTGGTATCCGTATAGTCACAGATTCGATTCTAGGGGAATATATGGTCG				2q31.1h	Homo sapiens microRNA 10b (MIR10B), microRNA.					
Homo sapiens	RefSeq	NM_013986.1	ILMN_17011	EWSR1	NM_005243.2	NM_005243.2		2130	125987606	NM_005243.2	EWSR1	NP_005234.1	ILMN_1697735	0000670072	A	2224	CCTGGAAAAATGGATAAAGGCGAGCACCGTCAGGAGCGCAGAGATCGGCC	22	+	28025825-28025841:28026112-28026144	22q12.2a	Homo sapiens Ewing sarcoma breakpoint region 1 (EWSR1), transcript variant EWS, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8084618] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EWS	EWS
Homo sapiens	RefSeq	NM_005243.1	ILMN_17011	EWSR1	NM_005243.2	NM_005243.2		2130	125987606	NM_005243.2	EWSR1	NP_005234.1	ILMN_1727041	0003370291	I	2515	GGGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGC	22	+	28026386-28026435	22q12.2a	Homo sapiens Ewing sarcoma breakpoint region 1 (EWSR1), transcript variant EWS, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8084618] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EWS	EWS
Homo sapiens	RefSeq	NM_001013717.1	ILMN_18988	C5ORF56	NM_001013717.1	NM_001013717.1		441108	61966888	NM_001013717.1	C5orf56	NP_001013739.1	ILMN_1771494	0006020687	S	1641	GCCAGACACAGAAGGAAAAATACCAGATGATCCCACTTATATGAGGTACC	5	+	131797496-131797545	5q31.1b	Homo sapiens chromosome 5 open reading frame 56 (C5orf56), mRNA.					
Homo sapiens	RefSeq	NM_172239.1	ILMN_5034	REXO1L1	NM_172239.2	NM_172239.2		254958	126273518	NM_172239.2	REXO1L1	NP_758439.2	ILMN_1810639	0006510047	S	6408	GGATCCCGCCCTCCAGCATGCAGCAGACTGCTGGCCCAGTCCTGGCTCCA	8	-	86756521-86756570	8q21.2b	Homo sapiens REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1 (REXO1L1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	GOR	GOR
Homo sapiens	RefSeq	NM_001105536.1	ILMN_342542	LOC727797	NM_001105536.1	NM_001105536.1		727797	157671960	NM_001105536.1	LOC727797	NP_001099006.1	ILMN_3241644	0000670452	S	2970	TCTTTCTCATATGATTGTGCACATACTTGAGACTGTTTTGAATTTGGGGG	3	+	64398-64447		Homo sapiens C-C chemokine receptor type 5-like (LOC727797), mRNA.					
Homo sapiens	Unigene	Hs.128557	ILMN_76654	HS.128557	Hs.128557		Hs.128557		27846708	BX105728			ILMN_1893335	0006060300	S	454	GCAGAGGGTTGGTGACAGACAATAGAGGCCAGGACACTTAAGTAAGAAGG	8	+	84036081-84036098:84036575-84036606		BX105728 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998P083813, mRNA sequence					
Homo sapiens	RefSeq	NM_005494.2	ILMN_167177	LOC387820	XR_019393.1	XR_019393.1		387820	113423158	XR_019393.1	LOC387820		ILMN_1690844	0006580189	I	1224	CCTGCTTTTCATTGTGTCTGAAATGTGAGCCACGTAGTGTCGGCCTGCTG				11q24.2d	PREDICTED: Homo sapiens similar to DnaJ (Hsp40) homolog, subfamily B, member 6 isoform a (LOC387820), mRNA.					DKFZp566D0824; HSJ-2; MGC117297; HSJ2; MRJ; HHDJ1; FLJ42837; MSJ-1; DnaJ; MGC1152
Homo sapiens	RefSeq	NM_005494.2	ILMN_167177	LOC387820	XR_019393.1	XR_019393.1		387820	113423158	XR_019393.1	LOC387820		ILMN_1784665	0005090121	A	797	GAATTGTCGAGAACGGTCAAGAAAGAGTAGAAGTTGAAGAAGATGGCCAG				11q24.2d	PREDICTED: Homo sapiens similar to DnaJ (Hsp40) homolog, subfamily B, member 6 isoform a (LOC387820), mRNA.					DKFZp566D0824; HSJ-2; MGC117297; HSJ2; MRJ; HHDJ1; FLJ42837; MSJ-1; DnaJ; MGC1152
Homo sapiens	RefSeq	XM_942392.1	ILMN_32876	LOC652759	XM_942392.1	XM_942392.1		652759	89077306	XM_942392.1	LOC652759	XP_947485.1	ILMN_1753369	0001770719	S	14	ACCAACTCAACCACGTACCTTTCTCCGGCTTCACTCTAGAGGAACCATGG					PREDICTED: Homo sapiens similar to F-box and WD-40 domain protein 10 (LOC652759), mRNA.					
Homo sapiens	RefSeq	NM_001002035.1	ILMN_5166	DEFB108B	NM_001002035.1	NM_001002035.1		245911	50344743	NM_001002035.1	DEFB108B	NP_001002035.1	ILMN_1740098	0002100747	S	172	CCTCTGGGGCATCAACCAAGAATTGAGAGCACTACACCCAAAAAGGACTG	11	+	71226206-71226255	11q13.4a	Homo sapiens defensin, beta 108B (DEFB108B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Homo sapiens	RefSeq	XM_927552.1	ILMN_5166	DEFB108B	NM_001002035.1	NM_001002035.1		245911	50344743	NM_001002035.1	DEFB108B	NP_001002035.1	ILMN_1730448	0003140128	S	42	GAGCCAAGTTCTACCAGCCAGGGGCAAATTCAAGGAGATCTGTGAACGTC	11	+	71221935-71221951:71226093-71226125	11q13.4a	Homo sapiens defensin, beta 108B (DEFB108B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Homo sapiens	RefSeq	NM_130396.1	ILMN_20569	WISP3	NM_130396.1	NM_130396.1		8838	18491003	NM_130396.1	WISP3	NP_569080.1	ILMN_1663780	0003370192	I	12	TAGGGGCAGAGTGTGCTTGGAGTCAGAGAACAAGGACGCTGGTGTGGCTG	6	+	112487920-112487969	6q21i	Homo sapiens WNT1 inducible signaling pathway protein 3 (WISP3), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9843955] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9843955] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9843955] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	LIBC; PPAC; PPD; CCN6; MGC125987; MGC125989; MGC125988	LIBC; PPAC; PPD; CCN6; MGC125987; MGC125989; MGC125988
Homo sapiens	RefSeq	NM_003069.2	ILMN_181613	SMARCA1	NM_003069.2	NM_003069.2		6594	21071043	NM_003069.2	SMARCA1	NP_003060.2	ILMN_2376258	0000430132	A	3350	GCAGAGTCAGCTACTGAGAGCTCTGGAAAGAAGGATGTCAAGAAGGTGAA	X	-	128408826-128408875	Xq25g	Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (SMARCA1), transcript variant 1, mRNA.	Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14609955] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IEA]	Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors [goid 43044] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 14609955] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence ISS]; Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors [goid 43044] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [pmid 14609955] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 31491] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [pmid 1408766] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14609955] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 14609955] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [pmid 14609955] [evidence IMP]; Interacting selectively with a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 31491] [evidence IEA]	SNF2L; SWI2; SWI; NURF140; ISWI; SNF2LB; SNF2L1	SNF2L; SWI2; SWI; NURF140; ISWI; SNF2LB; SNF2L1
Homo sapiens	RefSeq	NM_003069.2	ILMN_181613	SMARCA1	NM_003069.2	NM_003069.2		6594	21071043	NM_003069.2	SMARCA1	NP_003060.2	ILMN_2376263	0006200576	A	3449	GTTCCCATCTTCAAATGCTAATTGCCAGTTCCAGTGTATTCATGGTACTC	X	-	128408727-128408776	Xq25g	Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (SMARCA1), transcript variant 1, mRNA.	Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14609955] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IEA]	Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors [goid 43044] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 14609955] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence ISS]; Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors [goid 43044] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [pmid 14609955] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 31491] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [pmid 1408766] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14609955] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 14609955] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [pmid 14609955] [evidence IMP]; Interacting selectively with a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 31491] [evidence IEA]	SNF2L; SWI2; SWI; NURF140; ISWI; SNF2LB; SNF2L1	SNF2L; SWI2; SWI; NURF140; ISWI; SNF2LB; SNF2L1
Homo sapiens	RefSeq	NM_001005480.1	ILMN_19495	OR2A2	NM_001005480.2	NM_001005480.2		442361	154759241	NM_001005480.2	OR2A2	NP_001005480.2	ILMN_1777638	0001470463	S	642	GGTCTCCTACATGCACATCCTCGGGGCCATCCTGAAGATCCAGACAAAGG	7	+	143438250-143438299	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 2 (OR2A2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR7-11; OR2A17P; OST008; OR2A2P	OR7-11; OR2A17P; OST008; OR2A2P
Homo sapiens	RefSeq	NM_032709.1	ILMN_6297	C10ORF33	NM_032709.1	NM_032709.1		84795	14249307	NM_032709.1	C10orf33	NP_116098.1	ILMN_1684497	0001030278	S	1785	AGAGCATGTGACCCTGAACCAGCTCTGACCCAGGAAGAAGACTCCACCCC	10	-	100133505-100133544:100133545-100133554	10q24.2a	Homo sapiens chromosome 10 open reading frame 33 (C10orf33), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ23849; MGC13047	FLJ23849; MGC13047
Homo sapiens	RefSeq	XR_039702.1	ILMN_345247	LOC100134461	XR_039702.1	XR_039702.1		100134461	169170263	XR_039702.1	LOC100134461		ILMN_3243876	0000380647	S	19	GCTGGGCTTGCAGAGGCTGCCATGCGGGAGGCAGAGGCTGGGCCTCCTGA	7	-	56882032-56882081		PREDICTED: Homo sapiens misc_RNA (LOC100134461), miscRNA.					
Homo sapiens	RefSeq	NM_001976.2	ILMN_173014	ENO3	NM_001976.2	NM_001976.2		2027	16554590	NM_001976.2	ENO3	NP_001967.1	ILMN_2365383	0006110435	A	825	GGTGGTGATCGGCATGGATGTGGCAGCATCTGAGTTCTATCGCAATGGGA	17	+	4799497-4799546	17p13.2b	Homo sapiens enolase 3 (beta, muscle) (ENO3), transcript variant 1, mRNA.	A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water [goid 15] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O [goid 4634] [pmid 8513787] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	MSE	MSE
Homo sapiens	RefSeq	NM_001042508.3	ILMN_308763	C6ORF124	NM_001042508.3	NM_001042508.3		653483	150010525	NM_001042508.3	C6orf124	NP_001035973.1	ILMN_3242186	0001340347	S	1508	CACTGAACCTCAACTGCAGGAGCTTCATTCCTGAGGACGCTGTTACCAAG	6	-	167968172-167968221	6q27d	Homo sapiens chromosome 6 open reading frame 124 (C6orf124), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10382971] [evidence ND ]	HGC6.4; dJ431P23.3	HGC6.4; dJ431P23.3
Homo sapiens	RefSeq	NM_003758.1	ILMN_23754	EIF3J	NM_003758.2	NM_003758.2		8669	83281437	NM_003758.2	EIF3J	NP_003749.2	ILMN_1815345	0004280020	S	1976	GCCAGGTCCTTATGTTGTCACCATAGAGCAACAAAGGTATAGGGCTGCCT	15	+	42641711-42641760	15q15.3c	Homo sapiens eukaryotic translation initiation factor 3, subunit J (EIF3J), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex [goid 5852] [pmid 9822659] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 9822659] [evidence TAS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 9822659] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14688252] [evidence IPI]	eIF3-p35; eIF3j; eIF3-alpha; EIF3S1	eIF3-p35; eIF3j; eIF3-alpha
Homo sapiens	RefSeq	NM_206930.1	ILMN_20095	SYTL2	NM_206930.1	NM_206930.1		54843	46255067	NM_206930.1	SYTL2	NP_996813.1	ILMN_1671209	0003120491	I	208	CCCCTCATTGCATCTTGACTAATTGCTTCCAACTCCGGGGGCTTCCAGGG	11	-	85107602-85107651	11q14.1e	Homo sapiens synaptotagmin-like 2 (SYTL2), transcript variant f, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence ISS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence ISS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence ISS]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence ISS]	MGC102768; CHR11SYT; SGA72M; KIAA1597; SLP2	MGC102768; CHR11SYT; SGA72M; KIAA1597; SLP2
Homo sapiens	RefSeq	NM_032146.3	ILMN_10369	ARL6	NM_032146.3	NM_032146.3		84100	29826300	NM_032146.3	ARL6	NP_115522.1	ILMN_2307266	0001090482	A	1035	GGACTCTGACCTTTTTAAGAACATAGGACTTCAGGTATGCTAATTTGGCC	3	+	97517014-97517063	3q11.2c	Homo sapiens ADP-ribosylation factor-like 6 (ARL6), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence ISS]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence ISS]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	BBS3; MGC32934	BBS3; MGC32934
Homo sapiens	RefSeq	NM_032146.3	ILMN_10369	ARL6	NM_032146.3	NM_032146.3		84100	29826300	NM_032146.3	ARL6	NP_115522.1	ILMN_1703325	0002850154	I	256	GTCCCAAAATATTTCATTAACAAGTATCAAGTGATAATCCATGGAAAAGT	3	+	97484863-97484912	3q11.2c	Homo sapiens ADP-ribosylation factor-like 6 (ARL6), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence ISS]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence ISS]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	BBS3; MGC32934	BBS3; MGC32934
Homo sapiens	RefSeq	NM_025257.1	ILMN_8031	SLC44A4	NM_025257.2	NM_025257.2		80736	148612886	NM_025257.2	SLC44A4	NP_079533.2	ILMN_1730977	0000610010	A	2231	ACCCCCACCGTCCAGCCATCCAACCTCACTTCGCCTTACAGGTCTCCATT	6	-	31939301-31939350	6p21.32b	Homo sapiens solute carrier family 44, member 4 (SLC44A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ14491; NG22; CTL4; C6orf29	FLJ14491; NG22; CTL4; C6orf29
Homo sapiens	RefSeq	NM_002305.2	ILMN_25127	LGALS1	NM_002305.3	NM_002305.3		3956	85815826	NM_002305.3	LGALS1	NP_002296.1	ILMN_1723978	0001450193	S	208	AGACAGCAACAACCTGTGCCTGCACTTCAACCCTCGCTTCAACGCCCACG	22	+	36404457-36404506	22q13.1a	Homo sapiens lectin, galactoside-binding, soluble, 1 (LGALS1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 16130169] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any glycoside in which the sugar moiety is galactose [goid 16936] [evidence IEA]	DKFZp686E23103; GBP	GBP
Homo sapiens	RefSeq	NM_207511.1	ILMN_24063	C9ORF139	NM_207511.1	NM_207511.1		401563	46409645	NM_207511.1	C9orf139	NP_997394.1	ILMN_1769538	0001740615	S	3327	AAAGTGGAAAGGAATTGAGTAATGGGCCCCCAGGCAAGGCTGAGCCAGGC	9	+	139050567-139050616	9q34.3e	Homo sapiens chromosome 9 open reading frame 139 (C9orf139), mRNA.				FLJ42909; FLJ36268	FLJ42909; FLJ36268
Homo sapiens	RefSeq	XR_038429.1	ILMN_335827	LOC100130233	XR_038429.1	XR_038429.1		100130233	169216969	XR_038429.1	LOC100130233		ILMN_3253990	0006100167	M	829	CTGGCTGTCGTTTTGATAATGCAGAGTGAGAACCTTCCCTACCATGTTTG				Xp21.1e	PREDICTED: Homo sapiens misc_RNA (LOC100130233), miscRNA.					
Homo sapiens	RefSeq	XM_001720510.1	ILMN_334189	LOC730294	XM_001720510.1	XM_001720510.1		730294	169170442	XM_001720510.1	LOC730294	XP_001720562.1	ILMN_3235074	0006130414	S	398	GTTTCTTAGCCAAACTGGAGGTGCTGGCTTTAGGTGATCCGTGGACTCCC	7	-	71860414-71860463		PREDICTED: Homo sapiens hypothetical LOC730294 (LOC730294), mRNA.					
Homo sapiens	RefSeq	NR_024472.1	ILMN_371612	LOC100133308	NR_024472.1	NR_024472.1		100133308	213417968	NR_024472.1	LOC100133308		ILMN_3246556	0001710291	S	994	CACACCTGGGGCTAGCCAGCTTAGTGCCCTACGATATGTGCCAATAATCG	10	-	45595724-45595773	10q11.21c	Homo sapiens Ras suppressor protein 1 pseudogene (LOC100133308), non-coding RNA.					
Homo sapiens	RefSeq	NM_017633.1	ILMN_12554	FAM46A	NM_017633.2	NM_017633.2		55603	117414142	NM_017633.2	FAM46A	NP_060103.2	ILMN_1740466	0003940133	S	1591	CAGCCAGTATTCACGTGCCAGCAACAGACCTACTCCACTTGGCTACCCTG	6	-	82516137-82516186	6q14.1e	Homo sapiens family with sequence similarity 46, member A (FAM46A), mRNA.				XTP11; C6orf37; FLJ20037; FLJ31495	FLJ20037; FLJ31495; XTP11; C6orf37
Homo sapiens	RefSeq	NM_007367.2	ILMN_29685	RALY	NM_007367.2	NM_007367.2		22913	21396479	NM_007367.2	RALY	NP_031393.2	ILMN_2403994	0001340092	A	842	AAGTCCAATATCGATGCCCTGCTGAGCCGCTTGGAGCAGATCGCTGCGGA	20	+	32128216-32128265	20q11.22a	Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9376072] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 9376072] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9376072] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	P542; MGC117312; HNRPCL2	P542; MGC117312; HNRPCL2
Homo sapiens	RefSeq	NM_016732.1	ILMN_29685	RALY	NM_007367.2	NM_007367.2		22913	21396479	NM_007367.2	RALY	NP_031393.2	ILMN_1690610	0007200333	A	1306	AACGCATCCCAGCCAGTGCCATGTCCTCTGCAGGTGGAGTTACTGGCCTA	20	+	32131507-32131556	20q11.22a	Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse)) (RALY), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9376072] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 9376072] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9376072] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	P542; MGC117312; HNRPCL2	P542; MGC117312; HNRPCL2
Homo sapiens	Unigene	Hs.559999	ILMN_113987	HS.559999	Hs.559999		Hs.559999		81811464	DB038222			ILMN_1907847	0004670465	S	160	TGTACCTCTGCAATGTGGTCAAATAGAACGGCTGTGGACGCGACACCACC	1	-	221632879-221632928		DB038222 TESTI2 Homo sapiens cDNA clone TESTI2024434 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001018003.1	ILMN_29433	SORBS3	NM_001018003.1	NM_001018003.1		10174	65301111	NM_001018003.1	SORBS3	NP_001018003.1	ILMN_2261099	0000270543	I	32	CCTCCCGAGCCGCGAACTTTTCCGGAGGCGGCGGCCTCGGCTGCCGCTGG	8	+	22479191-22479240	8p21.3a	Homo sapiens sorbin and SH3 domain containing 3 (SORBS3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 9885244] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 51495] [pmid 9885244] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51496] [pmid 9885244] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9885244] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane [goid 17166] [pmid 9885244] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	SH3D4; vinexin; SCAM-1; SCAM1	SH3D4; vinexin; SCAM-1; SCAM1
Homo sapiens	RefSeq	NM_000757.3	ILMN_20353	CSF1	NM_000757.3	NM_000757.3		1435	27262660	NM_000757.3	CSF1	NP_000748.3	ILMN_2302947	0007150619	A	1811	GCCCCCTGACTCAGGATGACAGACAGGTGGAACTGCCAGTGTAGAGGGAA	1	+	110268973-110268973:110269292-110269334:110269335-110269340	1p13.3b	Homo sapiens colony stimulating factor 1 (macrophage) (CSF1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix [goid 1954] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 2460758] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 1791839] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 1791839] [evidence NAS]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [pmid 2460758] [evidence TAS]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42488] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence IEA]	Interacting selectively with the macrophage colony stimulating factor receptor [goid 5157] [pmid 2460758] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MCSF; MGC31930	MCSF; MGC31930
Homo sapiens	RefSeq	NM_001001412.3	ILMN_366488	CALHM1	NM_001001412.3	NM_001001412.3		255022	194440684	NM_001001412.3	CALHM1	NP_001001412.3	ILMN_3242412	0006450730	S	2706	TTCCAGTGGGAAGAGAAGGCCCGGAGGTATCAGGAGGTACAAATGTGATG	10	-	105213444-105213493	10q24.33a	Homo sapiens calcium homeostasis modulator 1 (CALHM1), mRNA.					
Homo sapiens	RefSeq	NM_172249.1	ILMN_5061	CSF2RA	NM_172249.1	NM_172249.1		1438	27437039	NM_172249.1	CSF2RA	NP_758452.1	ILMN_2376455	0004010719	A	930	TTCACCCCAGAGGAAGGGAAAGGCTACCGCGAAGAGGTCTTGACCGTGAA	XY	+	1367531-1367535:1367412-1367456	Xp22.33e,Yp11.32a	Homo sapiens colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) (CSF2RA), transcript variant 6, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2555171] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1358805] [evidence TAS];  [goid 4896] [evidence IEA]	CSF2R; CSF2RAY; CSF2RX; GM-CSF-R-alpha; CSF2RAX; CD116; MGC3848; CDw116; GMR; MGC4838; CSF2RY; GMCSFR	CSF2R; CSF2RAY; CSF2RX; GM-CSF-R-alpha; CSF2RAX; CD116; MGC3848; CDw116; GMR; MGC4838; CSF2RY; GMCSFR
Homo sapiens	RefSeq	NM_172249.1	ILMN_5061	CSF2RA	NM_172249.1	NM_172249.1		1438	27437039	NM_172249.1	CSF2RA	NP_758452.1	ILMN_2376458	0002900053	A	1324	CCGTGAGGCGGAGGTTGTAGTGAGCCAAGATCGCACCATTGCACACCAAC	XY	+	1369235-1369284	Xp22.33e,Yp11.32a	Homo sapiens colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) (CSF2RA), transcript variant 6, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2555171] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1358805] [evidence TAS];  [goid 4896] [evidence IEA]	CSF2R; CSF2RAY; CSF2RX; GM-CSF-R-alpha; CSF2RAX; CD116; MGC3848; CDw116; GMR; MGC4838; CSF2RY; GMCSFR	CSF2R; CSF2RAY; CSF2RX; GM-CSF-R-alpha; CSF2RAX; CD116; MGC3848; CDw116; GMR; MGC4838; CSF2RY; GMCSFR
Homo sapiens	RefSeq	XM_927414.1	ILMN_31700	LOC644225	XM_927414.1	XM_927414.1		644225	89041604	XM_927414.1	LOC644225	XP_932507.1	ILMN_1692696	0002900095	S	228	GAGGGTGTTCAGTCAACCTCCCCCCTACGCCCATGCGCCTCTCTTTCCTT	17	+	41329195-41329244		PREDICTED: Homo sapiens hypothetical protein LOC644225 (LOC644225), mRNA.					
Homo sapiens	RefSeq	XR_039753.1	ILMN_349250	LOC729279	XR_039753.1	XR_039753.1		729279	169213739	XR_039753.1	LOC729279		ILMN_3228294	0000020435	A	212	AAGCCTGCCACCTCCTACGCGCGGACCACCATCAACAAGAATGCTGGCGT				19p13.2a	PREDICTED: Homo sapiens misc_RNA (LOC729279), miscRNA.					
Homo sapiens	RefSeq	NM_004941.1	ILMN_8161	DHX8	NM_004941.1	NM_004941.1		1659	4826689	NM_004941.1	DHX8	NP_004932.1	ILMN_1687419	0000870246	S	4108	ACTGTGCTCATCTAAAGTGTTTGCCCCACTTCCCACCCCGTCTCCAGCCC	17	+	38957114-38957163	17q21.31b	Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 8 (DHX8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7935475] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 7935475] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 7935475] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 7935475] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	PRP22; PRPF22; HRH1; DDX8	PRP22; PRPF22; HRH1; DDX8
Homo sapiens	RefSeq	XM_059384.10	ILMN_308511	C2ORF77	NM_001085447.1	NM_001085447.1		129881	146260270	NM_001085447.1	C2orf77	NP_001078916.1	ILMN_1655365	0006620041	S	97	GGACACCTCGTCAGAGATGCTGGTACGGTTTGGACGGCGCTGTGGACGGG	2	-	170550785-170550834	2q31.1a	Homo sapiens chromosome 2 open reading frame 77 (C2orf77), mRNA.					
Homo sapiens	RefSeq	NM_001013398.1	ILMN_28010	IGFBP3	NM_000598.4	NM_000598.4		3486	62243067	NM_000598.4	IGFBP3	NP_000589.2	ILMN_1746085	0006590132	A	2205	GATACAACTGTGGCCATGACTGAGGAAAGGAGCTCACGCCCAGAGACTGG	7	-	45952202-45952251	7p13b	Homo sapiens insulin-like growth factor binding protein 3 (IGFBP3), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17434920] [evidence IDA]; A complex of proteins which includes the insulin-like growth factor (IGF) and a number of IGF-binding proteins. The complex plays a role in growth and development [goid 16942] [pmid 10766744] [evidence IC ]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [pmid 17591901] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [pmid 11940579] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle cell migration [goid 14912] [pmid 10766744] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 11971816] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45663] [pmid 12599210] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation [goid 48662] [pmid 10766744] [evidence IDA]	Increases the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a tyrosyl phenolic group of a protein [goid 8160] [pmid 11940579] [evidence IDA]; Interacting selectively with insulin-like growth factor I [goid 31994] [pmid 10766744] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [pmid 14576163] [evidence NAS]	IBP3; BP-53	BP-53; IBP3
Homo sapiens	RefSeq	NM_005856.2	ILMN_13174	RAMP3	NM_005856.2	NM_005856.2		10268	118572586	NM_005856.2	RAMP3	NP_005847.1	ILMN_2065745	0003120341	S	1123	TCATGATGCTGTGCCCGCTATGGGCTGTGTCCATGACCAGAGGCTGGAGT	7	+	45190151-45190200	7p13c	Homo sapiens receptor (G protein-coupled) activity modifying protein 3 (RAMP3), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 10882736] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9620797] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9620797] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 10882736] [evidence TAS]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA];  [goid 15027] [evidence IEA]		
Homo sapiens	Unigene	Hs.199657	ILMN_81524	HS.199657	Hs.199657		Hs.199657		33295752	AJ571891			ILMN_1908840	0004730762	S	328	GAGCGTGTTCTCAGGAGCAGGTGGGCAGGGGCCTTGCAGACTCTTCATTT	4	+	1522284-1522333		AJ571891 HM3/RH2 Homo sapiens cDNA clone HSPD44306, mRNA sequence					
Homo sapiens	Unigene	Hs.292009	ILMN_85044	HS.292009	Hs.292009		Hs.292009		22658337	BC031235			ILMN_1827050	0001500367	S	1546	GACAGCACCACTCAGGCAGCTTTTGGGAATTTGACTCCCCCATGTCCACC	19	+	40090825-40090874		Homo sapiens cDNA clone IMAGE:4838482					
Homo sapiens	RefSeq	XM_001722169.1	ILMN_340314	LOC388572	XM_001722169.1	XM_001722169.1		388572	169170158	XM_001722169.1	LOC388572	XP_001722221.1	ILMN_3205603	0000580347	A	335	CGCACACAGATGGGATTTGGGAATAGGTTTGGTTATCCAAGGAGCAGTGC	7	-	89166-89215	11p15.5d	PREDICTED: Homo sapiens hypothetical LOC388572 (LOC388572), mRNA.					
Homo sapiens	RefSeq	NM_152943.1	ILMN_914	ZNF268	NM_152943.1	NM_152943.1		10795	41281777	NM_152943.1	ZNF268	NP_694422.1	ILMN_1750457	0004180487	I	677	GTTTGGTGTCTGGTGAGGGCCTGCTCTGTGCTTCCAAGATGACGCCTTGT	12	+	132280126-132280175	12q24.33d	Homo sapiens zinc finger protein 268 (ZNF268), transcript variant B, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11311945] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11311945] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11311945] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HZF3; MGC126498	HZF3; MGC126498
Homo sapiens	RefSeq	NM_018423.1	ILMN_182051	STYK1	NM_018423.1	NM_018423.1		55359	8922178	NM_018423.1	STYK1	NP_060893.1	ILMN_1802105	0005670377	S	2001	CCTCCTTCAAGAAAAGGTGGTAGGACACAAAGTTCTTCAGTCCTGAGCCC	12	-	10663497-10663546	12p13.2c	Homo sapiens serine/threonine/tyrosine kinase 1 (STYK1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp761P1010; NOK; SuRTK106	DKFZp761P1010; NOK; SuRTK106
Homo sapiens	RefSeq	NM_018423.1	ILMN_182051	STYK1	NM_018423.1	NM_018423.1		55359	8922178	NM_018423.1	STYK1	NP_060893.1	ILMN_2187206	0000580079	S	2351	GTAGAAACCAAGCAAGAAGGCTTAGTAGCTCAGTCTTTAACAAGGGCTAG	12	-	10663147-10663196	12p13.2c	Homo sapiens serine/threonine/tyrosine kinase 1 (STYK1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp761P1010; NOK; SuRTK106	DKFZp761P1010; NOK; SuRTK106
Homo sapiens	Unigene	Hs.508682	ILMN_97811	HS.508682	Hs.508682		Hs.508682		10919949	AV762101			ILMN_1821517	0006550386	S	686	GCAGGGCCCGTATTTACCCTATAGCACCCCCTCTAACCCCTTTTGAGACC					AV762101 MDS Homo sapiens cDNA clone MDSEOA03 5, mRNA sequence					
Homo sapiens	RefSeq	XM_939572.1	ILMN_307041	SHC2	NM_012435.1	NM_012435.1		25759	130506678	NM_012435.1	SHC2	NP_036567.1	ILMN_1734667	0001400095	A	1089	AGGGTCTGGACGCCCCCGAGCCGGAGGACAGCCCCAAAAAGGATCTGTTT	19	-	376103-376152	19p13.3j	Homo sapiens SHC (Src homology 2 domain containing) transforming protein 2 (SHC2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7527937] [evidence TAS]	SCK; SLI; SHCB	
Homo sapiens	RefSeq	XM_065166.3	ILMN_307041	SHC2	NM_012435.1	NM_012435.1		25759	130506678	NM_012435.1	SHC2	NP_036567.1	ILMN_1683857	0001850392	I	1490	AGCCACCTGATCGACCACCACCTGCAGAACGGGCAGCCCATCGTGGCCGC	19	-	369973-370022	19p13.3j	Homo sapiens SHC (Src homology 2 domain containing) transforming protein 2 (SHC2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7527937] [evidence TAS]	SCK; SLI; SHCB	
Homo sapiens	RefSeq	XM_939572.1	ILMN_307041	SHC2	NM_012435.1	NM_012435.1		25759	130506678	NM_012435.1	SHC2	NP_036567.1	ILMN_1721087	0001410440	I	2008	ACCTGAGGACTGGGTGCACAGTTGTCTTTGAGGGGGGACGCTTAAGGTGC	19	-	367855-367904	19p13.3j	Homo sapiens SHC (Src homology 2 domain containing) transforming protein 2 (SHC2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7527937] [evidence TAS]	SCK; SLI; SHCB	
Homo sapiens	RefSeq	NM_012314.2	ILMN_19876	KIR2DS4	NM_012314.2	NM_012314.2		3809	46397358	NM_012314.2	KIR2DS4	NP_036446.2	ILMN_1772787	0004050093	A	81	GGTTCTTCTTGCTGCAGGGGGCCTGGCCACAGGAGGGAGTCCACAGAAAA	19	+	87513-87548:89471-89484	19q13.42b	Homo sapiens killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4 (KIR2DS4), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7749980] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NKAT8; KIR1D; MGC125315; KKA3; PAX; CD158I; cl-39; KIR412; MGC125317	NKAT8; KIR1D; MGC125315; KKA3; PAX; CD158I; cl-39; KIR412; MGC125317
Homo sapiens	RefSeq	XM_937814.1	ILMN_309025	ZNF251	NM_138367.1	NM_138367.1		90987	153792406	NM_138367.1	ZNF251	NP_612376.1	ILMN_1656404	0000060575	A	2671	CAAGTGTGGTACAGAGAACTTGGGCCTGCTGGGGGCGCTTAGCCTTACTC	8	-	145947113-145947162	8q24.3h	Homo sapiens zinc finger protein 251 (ZNF251), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ34319	
Homo sapiens	RefSeq	NM_001751.4	ILMN_27921	CARS	NM_001014438.1	NM_001014438.1		833	62240993	NM_001014438.1	CARS	NP_001014438.1	ILMN_1696066	0000020010	A	2500	CATGGAGGGCAAAGAGCTCAGCAAAGGGCAAGCCAAGAAGCTGAAGAAGC	11	-	3025695-3025744	11p15.4d	Homo sapiens cysteinyl-tRNA synthetase (CARS), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11347887] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11347887] [evidence NAS]	The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6423] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6423] [pmid 11347887] [evidence IDA]; The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6423] [pmid 17303165] [evidence IDA]; The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6423] [pmid 10908348] [evidence IDA]; The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6423] [pmid 11347887] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys) [goid 4817] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with transfer RNA [goid 49] [pmid 11347887] [evidence IDA]; Interacting selectively with transfer RNA [goid 49] [pmid 7987009] [evidence NAS]; Interacting selectively with transfer RNA [goid 49] [pmid 17303165] [evidence IMP]; Interacting selectively with transfer RNA [goid 49] [pmid 11347887] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys) [goid 4817] [pmid 11347887] [evidence IDA]; Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys) [goid 4817] [pmid 17303165] [evidence IDA]; Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys) [goid 4817] [pmid 10908348] [evidence IDA]; Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys) [goid 4817] [pmid 11347887] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10908348] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 17303165] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11347887] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 17303165] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CARS1; CYSRS; MGC:11246	CARS1; CYSRS; MGC:11246
Homo sapiens	RefSeq	XM_942265.1	ILMN_172434	C7ORF28B	XM_001126212.1	XM_001126212.1		221960	113418939	XM_001126212.1	C7orf28B	XP_001126212.1	ILMN_1663493	0006760670	A	524	ATTTGCAAACGCTACATTTGCAGTCATGTGACCTACTTGACATTTTTGGT				7p22.1a	PREDICTED: Homo sapiens chromosome 7 open reading frame 28B (C7orf28B), mRNA.					
Homo sapiens	RefSeq	XM_927783.1	ILMN_33512	LOC644683	XM_927783.1	XM_927783.1		644683	88986431	XM_927783.1	LOC644683	XP_932876.1	ILMN_1653240	0001340735	S	181	ATTGCCCCTAAAGAGCTTTCAGTGGGACGAGATGTGGAGGTGAAAGACAG	5	+	164697740-164697789		PREDICTED: Homo sapiens hypothetical protein LOC644683 (LOC644683), mRNA.					
Homo sapiens	RefSeq	XM_001723715.1	ILMN_337014	C14ORF38	XM_001723715.1	XM_001723715.1		729665	169207318	XM_001723715.1	C14orf38	XP_001723767.1	ILMN_3178849	0005900647	A	2229	TGTCAGTACATGGCTACGAGGGAGTCTTGAAGGGCTGCGTTTGCTTGTGG				14q23.1b	PREDICTED: Homo sapiens chromosome 14 open reading frame 38 (C14orf38), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]				
Homo sapiens	RefSeq	NM_005909.2	ILMN_28251	MAP1B	NM_005909.3	NM_005909.3		4131	153945727	NM_005909.3	MAP1B	NP_005900.2	ILMN_1680154	0007550685	I	307	GTCCACCTCGCCTAGCCTGTCGCACCGCTTCCTTGACAGCAAGTTCTACT	5	+	71403424-71403473	5q13.2b	Homo sapiens microtubule-associated protein 1B (MAP1B), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 1881920] [evidence TAS]	A process that results in a parallel arrangement of microtubules [goid 1578] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 1881920] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12147674] [evidence IPI]	FUTSCH; MAP5; DKFZp686F1345; DKFZp686E1099; FLJ38954	FUTSCH; MAP5; DKFZp686F1345
Homo sapiens	RefSeq	NM_003573.2	ILMN_174435	LTBP4	NM_003573.2	NM_003573.2		8425	110347411	NM_003573.2	LTBP4	NP_003564.2	ILMN_2352917	0002000427	A	4197	ATATGGGCCTGAGTTGTACCCACCACCTGCGCTACCCTACGACCCCTACC	19	+	41133002-41133051	19q13.2b	Homo sapiens latent transforming growth factor beta binding protein 4 (LTBP4), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 9660815] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 9660815] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9660815] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9660815] [evidence TAS]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [pmid 9660815] [evidence TAS]; Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [pmid 9660815] [evidence IDA]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [pmid 9660815] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 9660815] [evidence TAS]	Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [pmid 9660815] [evidence NAS]; Interacting selectively with an integrin [goid 5178] [pmid 9660815] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9660815] [evidence NAS]; Interacting selectively with any glycan (polysaccharide) containing a substantial proportion of aminomonosaccharide residues [goid 5539] [pmid 9660815] [evidence NAS]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [pmid 9660815] [evidence IDA]	FLJ90018; LTBP-4L; LTBP-4; FLJ46318	FLJ90018; LTBP-4L; FLJ46318; LTBP-4
Homo sapiens	RefSeq	XM_001725120.1	ILMN_343234	LOC100133673	XM_001725120.1	XM_001725120.1		100133673	169218026	XM_001725120.1	LOC100133673	XP_001725172.1	ILMN_3242320	0002340138	S	1	CACTGTCCCTATCAGGTGGCCAGCGTGAGGAAGACCACGGGTCCTGGATG					PREDICTED: Homo sapiens similar to Tubulin, gamma 1 (LOC100133673), mRNA.					
Homo sapiens	RefSeq	XM_941853.1	ILMN_32572	LOC652416	XM_941853.1	XM_941853.1		652416	88969100	XM_941853.1	LOC652416	XP_946946.1	ILMN_1815071	0003130500	S	1049	GCCACCTGGTGTCACCTTTCTGCCGTGTTCCTAACACTTTGATCCCTGTC					PREDICTED: Homo sapiens similar to beta-1,4-mannosyltransferase (LOC652416), mRNA.					
Homo sapiens	RefSeq	NM_007312.3	ILMN_161970	HYAL1	NM_007312.3	NM_007312.3		3373	24497560	NM_007312.3	HYAL1	NP_009296.1	ILMN_1712620	0005360014	I	528	CAGCCCTGAGCAGTGGGGGAATCGGAGACTTTGCAACCTGTTCTCAGCTC	3	-	50340427-50340476	3p21.31b	Homo sapiens hyaluronoglucosaminidase 1 (HYAL1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9223416] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [pmid 9223416] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	LUCA1; HYAL-1; MGC45987; NAT6	LUCA1; HYAL-1; MGC45987; NAT6
Homo sapiens	RefSeq	NM_001012454.1	ILMN_20601	FAM71F2	NM_001012454.3	NM_001012454.3		346653	149192823	NM_001012454.3	FAM71F2	NP_001012457.3	ILMN_1788806	0002710497	S	806	CAGCTCTCAGGAAAGCCCCAGCTCACAGCAGACAGGAACAATGACACTGC	7	+	128107405-128107439:128110254-128110268	7q32.1a	Homo sapiens family with sequence similarity 71, member F2 (FAM71F2), transcript variant 1, mRNA.				FAM137B	
Homo sapiens	RefSeq	NM_003134.2	ILMN_171778	LOC729466	XR_015916.1	XR_015916.1		729466	113422568	XR_015916.1	LOC729466		ILMN_1809347	0001230220	S	473	AGCTAGGTTTCTGGTTCCCCCACAGTAGGTGTTTTCACATAAGATTAGGG	11	+	92908701-92908750	11q21a	PREDICTED: Homo sapiens hypothetical protein LOC729466 (LOC729466), mRNA.					ALURBP; MGC14326
Homo sapiens	RefSeq	Hs.535735	ILMN_173039	LOC728081	XM_001132623.1	XM_001132623.1		728081	113416340	XM_001132623.1	LOC728081	XP_001132623.1	ILMN_1864813	0003360528	S	259	CCTGAACCGGAGCCAAAGCTGGCCGAGGAGCTGGGGGAGATTCTGAGACT				4q34.3d	PREDICTED: Homo sapiens hCG2025798 (LOC728081), mRNA.					
Homo sapiens	RefSeq	XM_001716696.1	ILMN_337648	LOC100131257	XM_001716696.1	XM_001716696.1		100131257	169170924	XM_001716696.1	LOC100131257	XP_001716748.1	ILMN_3202353	0002490010	A	181	AGCAAAGAAGCCTTCACCAGTGAGAAGAACAATGAATGTAATAAACCTGA	7	-	7085498-7085547	7p22.1a	PREDICTED: Homo sapiens similar to hCG19534 (LOC100131257), mRNA.					
Homo sapiens	RefSeq	XM_938870.1	ILMN_45865	LOC649800	XM_938870.1	XM_938870.1		649800	89041069	XM_938870.1	LOC649800	XP_943963.1	ILMN_1697345	0003890471	S	1265	GTACAATTTGTCTGGACGTGGGCTCTCAGAGGCAGGTTGCTGGGCTAGAG					PREDICTED: Homo sapiens similar to BTG3 associated nuclear protein isoform a (LOC649800), mRNA.					
Homo sapiens	RefSeq	NR_003038.1	ILMN_168725	SNHG5	NR_003038.1	NR_003038.1		387066	94538360	NR_003038.1	SNHG5		ILMN_2200659	0001050475	S	24	GTCTGGGCGGGTGGTAGGAACAATGGCGCTGTCTTCAGTGGCACAGTGGA	6	-	86444592-86444625:86445131-86445146	6q14.3c	Homo sapiens small nucleolar RNA host gene (non-protein coding) 5 (SNHG5) on chromosome 6.				MGC16362; U50HG; bA33E24.2; C6orf160	MGC16362; U50HG; bA33E24.2; C6orf160
Homo sapiens	RefSeq	NM_181712.2	ILMN_164531	ANKRD38	NM_181712.3	NM_181712.3		163782	142373862	NM_181712.3	ANKRD38	NP_859063.2	ILMN_1776936	0007610128	S	4396	ATTCCCTGGGGCCAGCACATGCAAGGTTTATATGGTCAGTAGCTCACGTG				1p31.3d	Homo sapiens ankyrin repeat domain 38 (ANKRD38), mRNA.				dJ1078M7.1; FLJ10884; KIAA0172; RP5-1155K23.5	dJ1078M7.1; FLJ10884; KIAA0172; RP5-1155K23.5
Homo sapiens	RefSeq	XM_944363.1	ILMN_31000	SIRPB2	XM_939897.2	XM_939897.2		284759	113428928	XM_939897.2	SIRPB2	XP_944990.1	ILMN_1697353	0005810309	A	630	GTCTGAGCCGGGAGGCCATTTACAACTTTGGAGGCATCTCCCACCCCAAG				20p13e	PREDICTED: Homo sapiens signal-regulatory protein beta 2, transcript variant 4 (SIRPB2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_012096.1	ILMN_171637	APPL1	NM_012096.2	NM_012096.2		26060	124494248	NM_012096.2	APPL1	NP_036228.1	ILMN_1763730	0005860554	S	5888	TGAAGAACTCGACTTTATGTGATCATGGTATTGGTATACATGTGGGGTGG	3	+	57281745-57281794	3p14.3b	Homo sapiens adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 (APPL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15016378] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10490823] [evidence IC ]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins [goid 16581] [pmid 15016378] [evidence IDA]; The lipid bilayer surrounding an early endosome [goid 31901] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10490823] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 15016378] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15016378] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12011067] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10490823] [evidence IPI]	APPL; DIP13alpha	APPL1; DIP13alpha
Homo sapiens	RefSeq	NM_001006610.1	ILMN_9220	SIAH1	NM_001006610.1	NM_001006610.1		6477	55749556	NM_001006610.1	SIAH1	NP_001006611.1	ILMN_2279413	0000840082	I	328	CAGAAAGAGCCCAGGAGGGGCCTGTTCCTTTACTTCTTGGGGGAAACGCA	16	-	48399407-48399456	16q12.1b	Homo sapiens seven in absentia homolog 1 (Drosophila) (SIAH1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9334332] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9334332] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9403064] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9334332] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9334332] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9403064] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 11389840] [evidence IDA]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11389840] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11863358] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Siah-1a; Siah-1; HUMSIAH; hSIAH1	Siah-1a; Siah-1; HUMSIAH; hSIAH1
Homo sapiens	RefSeq	NM_001006610.1	ILMN_9220	SIAH1	NM_001006610.1	NM_001006610.1		6477	55749556	NM_001006610.1	SIAH1	NP_001006611.1	ILMN_2380566	0007570537	A	2086	GGTGCTCTCTTTCTGTCTTCTACAGATGAGTCACACCTTTGAGCTTAATC	16	-	48394693-48394742	16q12.1b	Homo sapiens seven in absentia homolog 1 (Drosophila) (SIAH1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9334332] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9334332] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9403064] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9334332] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9334332] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9403064] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 11389840] [evidence IDA]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11389840] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11863358] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Siah-1a; Siah-1; HUMSIAH; hSIAH1	Siah-1a; Siah-1; HUMSIAH; hSIAH1
Homo sapiens	RefSeq	NM_001006610.1	ILMN_9220	SIAH1	NM_001006610.1	NM_001006610.1		6477	55749556	NM_001006610.1	SIAH1	NP_001006611.1	ILMN_1711627	0002850435	A	1662	GTTTTTGCGTGGGAGTGTGTGCCTGCGTGGGTGTGTGCGTGTTTGGGTTT	16	-	48395117-48395166	16q12.1b	Homo sapiens seven in absentia homolog 1 (Drosophila) (SIAH1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9334332] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9334332] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9403064] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9334332] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9334332] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9403064] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 11389840] [evidence IDA]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11389840] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11863358] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Siah-1a; Siah-1; HUMSIAH; hSIAH1	Siah-1a; Siah-1; HUMSIAH; hSIAH1
Homo sapiens	RefSeq	NM_020690.4	ILMN_12709	ANKHD1-EIF4EBP3	NM_020690.4	NM_020690.4		404734	46519152	NM_020690.4	ANKHD1-EIF4EBP3	NP_065741.3	ILMN_1766560	0000520008	S	7751	ACCAGACCGAAGAAGAGAATTGGACGGCCGATGGTGGCCTCTCCTAACCA	5	+	139884412-139884461	5q31.3a-q31.3b	Homo sapiens ANKHD1-EIF4EBP3 readthrough (ANKHD1-EIF4EBP3), mRNA.				MASK-BP3arf	MASK-BP3arf
Homo sapiens	RefSeq	XM_944087.1	ILMN_44219	LOC650203	XM_944087.1	XM_944087.1		650203	89039319	XM_944087.1	LOC650203	XP_949180.1	ILMN_1687094	0006860403	S	417	TCGGAGAAAGGGTAGCAGGGAGAGCGGCTCGTCGTCCAGCAGATGCAGCT					PREDICTED: Homo sapiens hypothetical LOC650203 (LOC650203), mRNA.					
Homo sapiens	RefSeq	NM_052836.1	ILMN_3999	CDH23	NM_052836.1	NM_052836.1		64072	16507963	NM_052836.1	CDH23	NP_443068.1	ILMN_1779934	0000360014	A	1774	CAGCCACTGTACAACATCAGCCTGTACGAGAACGTCACCGTGGGGACCTC	10	+	73076315-73076364	10q22.1d-q22.1e	Homo sapiens cadherin-like 23 (CDH23), transcript variant 2, mRNA.	The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [pmid 12485990] [evidence ISS]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 16679490] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11138009] [evidence NAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IEA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [pmid 16679490] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IEA]; The series of events required for an organism to receive an orientational stimulus, convert it to a molecular signal, and recognize and characterize the signal. Equilibrioception refers to a combination of processes by which an organism can perceive its orientation with respect to gravity. In animals, stimuli come from labyrinth system of the inner ears, monitoring the direction of motion; visual stimuli, with information on orientation and motion; pressure receptors, which tell the organism which body surfaces are in contact with the ground; and proprioceptive cues, which report which parts of the body are in motion [goid 50957] [pmid 16679490] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12485990] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp434P2350; USH1H; KIAA1774; FLJ00233; MGC102761; FLJ36499; DFNB12; USH1D; KIAA1812	DKFZp434P2350; USH1H; KIAA1774; FLJ00233; MGC102761; FLJ36499; DFNB12; USH1D; KIAA1812
Homo sapiens	RefSeq	NM_052836.1	ILMN_3999	CDH23	NM_052836.1	NM_052836.1		64072	16507963	NM_052836.1	CDH23	NP_443068.1	ILMN_1658675	0003360187	I	1896	GCACCCAGAGGGATTTTGTCCAAGGGACCTCAGCAATCAGGGAAGGAGGC	10	+	73076437-73076486	10q22.1d-q22.1e	Homo sapiens cadherin-like 23 (CDH23), transcript variant 2, mRNA.	The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs [goid 1917] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IEA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [pmid 12485990] [evidence ISS]; The end of a stereocilium bundle, distal to the site of the bundle's attachment to the apical cell surface [goid 32426] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 16679490] [evidence IMP]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11138009] [evidence NAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IEA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [pmid 16679490] [evidence IMP]; Morphogenesis, during the post-embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48563] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50953] [evidence IEA]; The series of events required for an organism to receive an orientational stimulus, convert it to a molecular signal, and recognize and characterize the signal. Equilibrioception refers to a combination of processes by which an organism can perceive its orientation with respect to gravity. In animals, stimuli come from labyrinth system of the inner ears, monitoring the direction of motion; visual stimuli, with information on orientation and motion; pressure receptors, which tell the organism which body surfaces are in contact with the ground; and proprioceptive cues, which report which parts of the body are in motion [goid 50957] [pmid 16679490] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells [goid 60088] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12485990] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp434P2350; USH1H; KIAA1774; FLJ00233; MGC102761; FLJ36499; DFNB12; USH1D; KIAA1812	DKFZp434P2350; USH1H; KIAA1774; FLJ00233; MGC102761; FLJ36499; DFNB12; USH1D; KIAA1812
Homo sapiens	RefSeq	NM_016656.2	ILMN_28350	RRAGB	NM_016656.2	NM_016656.2		10325	46249396	NM_016656.2	RRAGB	NP_057740.2	ILMN_1651771	0002750753	I	841	AGCAGTTTGAGCACCTACTCTCTCGTAGACTCTGTTGGAAATACAAAGAC	X	+	55770497-55770546	Xp11.21a	Homo sapiens Ras-related GTP binding B (RRAGB), transcript variant RAGBl, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9394008] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7499430] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11073942] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 7499430] [evidence IDA]	RAGB; bA465E19.1	RAGB; bA465E19.1
Homo sapiens	RefSeq	NM_207578.1	ILMN_19271	PRKACB	NM_207578.1	NM_207578.1		5567	46909586	NM_207578.1	PRKACB	NP_997461.1	ILMN_2278112	0006290768	I	1535	TCATAACAGTCTAAATCCTGGGCACCTTAGAAGAATGACACCAGAAAACC	1	+	84443258-84443307	1p31.1a	Homo sapiens protein kinase, cAMP-dependent, catalytic, beta (PRKACB), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [pmid 12420224] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12420224] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2342480] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 12420224] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 12721358] [evidence EXP]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 12420224] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [pmid 12420224] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12420224] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PKACB; MGC41879; MGC9320; DKFZp781I2452	PKACB; MGC41879; MGC9320; DKFZp781I2452
Homo sapiens	RefSeq	NM_207578.1	ILMN_19271	PRKACB	NM_207578.1	NM_207578.1		5567	46909586	NM_207578.1	PRKACB	NP_997461.1	ILMN_1759922	0001470286	I	1109	GTGTAGACTCTCAAGAGGACTAAAGGTCATATGAAGAATGATGAGAGAAC	1	+	84442832-84442881	1p31.1a	Homo sapiens protein kinase, cAMP-dependent, catalytic, beta (PRKACB), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [pmid 12420224] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12420224] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2342480] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 12420224] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 12721358] [evidence EXP]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 12420224] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [pmid 12420224] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12420224] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PKACB; MGC41879; MGC9320; DKFZp781I2452	PKACB; MGC41879; MGC9320; DKFZp781I2452
Homo sapiens	RefSeq	XM_932412.1	ILMN_39213	LOC339047	XM_932412.1	XM_932412.1		339047	89039832	XM_932412.1	LOC339047	XP_937505.1	ILMN_1685136	0000650767	I	144	TCTGTATGGACCCTGCCAAGCTCTGCCCCTCTGCCCCTGCATTGGGGCGC	16	+	16332588-16332637	16p13.11b	PREDICTED: Homo sapiens hypothetical protein LOC339047, transcript variant 27 (LOC339047), mRNA.					
Homo sapiens	Unigene	Hs.543987	ILMN_107480	HS.543987	Hs.543987		Hs.543987		4290896	AI433683			ILMN_1869066	0005360133	S	275	CAGTAACCAGGAGCAGCCAGTGGGAGGTGTGTGTCAGTGCAAGTGAAGCC	5	-	99723710-99723759		ti88c09.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2139088 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001003686.1	ILMN_21460	PMS2L3	NM_001003686.1	NM_001003686.1		5387	51102296	NM_001003686.1	PMS2L3	NP_001003686.1	ILMN_2361427	0004120376	A	855	CTCTGGGCCAGTGGTACTGAGTCTAAGCACTGCAGTGAAGGAGTTAGTAG	7	-	74981938-74981968:74981969-74981987	7q11.23d	Homo sapiens postmeiotic segregation increased 2-like 3 (PMS2L3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PMS5; MGC126647; PMS2L9; PMSR3	PMS5; MGC126647; PMS2L9; PMSR3
Homo sapiens	RefSeq	NM_033480.1	ILMN_162984	FBXO9	NM_033480.2	NM_033480.2		26268	117190398	NM_033480.2	FBXO9	NP_258441.1	ILMN_1717063	0005290541	I	207	CTCTGCTAAGCTCCGCTGCAGAGACAGGCAGGAGTAGACACCCGGACACC	6	+	52930463-52930512	6p12.1d	Homo sapiens F-box protein 9 (FBXO9), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531037] [evidence NAS]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531037] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531037] [evidence NAS]	dJ341E18.2; DKFZp434C0118; KIAA0936; FBX9; NY-REN-57; VCIA1	dJ341E18.2; DKFZp434C0118; KIAA0936; FBX9; NY-REN-57; VCIA1
Homo sapiens	RefSeq	NM_005279.2	ILMN_307194	GPR1	NM_001098199.1	NM_001098199.1		2825	148228828	NM_001098199.1	GPR1	NP_001091669.1	ILMN_1655348	0006860369	S	1596	GTGTGGATATGAAACTTAGGAAGGATCCTCTTGACTCCTTGTGATGTGGC	2	-	207040708-207040757	2q33.3b	Homo sapiens G protein-coupled receptor 1 (GPR1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7851889] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7851889] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	XM_001732852.1	ILMN_340856	LOC393078	XM_001732852.1	XM_001732852.1		393078	169172049	XM_001732852.1	LOC393078	XP_001732904.1	ILMN_3206270	0000270360	A	1660	CACAGACGCTACGTCAGGCGCCGCCCGGAAGAGCCCACCACAGACGCTAC				7q36.3c	PREDICTED: Homo sapiens hypothetical LOC393078 (LOC393078), mRNA.					
Homo sapiens	RefSeq	XM_001732852.1	ILMN_340856	LOC393078	XM_001732852.1	XM_001732852.1		393078	169172049	XM_001732852.1	LOC393078	XP_001732904.1	ILMN_3282783	0005390348	M	544	AGCGAGAACCTCTCAGCACCAAAACCCTCACGGGCGTCTCCTGAGGGCCA				7q36.3c	PREDICTED: Homo sapiens hypothetical LOC393078 (LOC393078), mRNA.					
Homo sapiens	Unigene	Hs.200095	ILMN_81562	HS.200095	Hs.200095		Hs.200095		27842827	BX096476			ILMN_1886642	0007510577	S	34	CTGCTGTGAAGGCTTTGGAGGAGACAGACCATGACCAGACACAGGCCCTG	18	-	17727870-17727919		BX096476 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998H125776, mRNA sequence					
Homo sapiens	RefSeq	XM_938229.1	ILMN_138651	PIAS2	XM_938229.1	XM_938229.1		9063	89047428	XM_938229.1	PIAS2	XP_943322.1	ILMN_1658302	0005050477	I	3686	GGGGGGAAACAAACCCAAATCTACGAGCAGTAGTTGCACATAGTTGCCAG				18q21.1b	PREDICTED: Homo sapiens protein inhibitor of activated STAT, 2 (PIAS2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 15572661] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418410] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15767674] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9256341] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_001017404.1	ILMN_12313	LGR6	NM_001017404.1	NM_001017404.1		59352	62912473	NM_001017404.1	LGR6	NP_001017404.1	ILMN_1677464	0003870414	I	1	ATGCGCTTGGAGGGAGAGGGCCGCTCAGCGAGGGCGGGACAGAACCTCTC	1	+	200449906-200449955	1q32.1d	Homo sapiens leucine-rich repeat-containing G protein-coupled receptor 6 (LGR6), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	VTS20631; FLJ14471; GPCR	VTS20631; GPCR; FLJ14471
Homo sapiens	RefSeq	NM_001017403.1	ILMN_12313	LGR6	NM_001017404.1	NM_001017404.1		59352	62912473	NM_001017404.1	LGR6	NP_001017404.1	ILMN_1713550	0003610154	A	2789	AAGACAGTGAAGGGGTGGAGGGTTGATCAGGGCACAGTGGACAGGGAGAC	1	+	200555260-200555309	1q32.1d	Homo sapiens leucine-rich repeat-containing G protein-coupled receptor 6 (LGR6), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	VTS20631; FLJ14471; GPCR	VTS20631; GPCR; FLJ14471
Homo sapiens	RefSeq	XM_001719452.1	ILMN_334658	LOC100129033	XM_001719452.1	XM_001719452.1		100129033	169169376	XM_001719452.1	LOC100129033	XP_001719504.1	ILMN_3252750	0005960315	M	176	CAGCTGGACCTCATGCACTCACATGGACAACACACTTCTCTCCTTCAGTG	6	+	4990210-4990259	6p25.1c	PREDICTED: Homo sapiens QIQN5815 (LOC100129033), mRNA.					
Homo sapiens	RefSeq	NM_001007073.1	ILMN_11587	RPL32	NM_001007073.1	NM_001007073.1		6161	55743127	NM_001007073.1	RPL32	NP_001007074.1	ILMN_2400143	0004780414	A	1203	GCCAAGGCGGGGACCTAACTGGTGACAATTGAGCCTCTTGACTGGTACTC	3	-	12876941-12876990	3p25.1d	Homo sapiens ribosomal protein L32 (RPL32), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	PP9932	PP9932
Homo sapiens	RefSeq	NM_013396.3	ILMN_12934	USP25	NM_013396.3	NM_013396.3		29761	50312665	NM_013396.3	USP25	NP_037528.3	ILMN_1670764	0000610554	S	4638	CAGCGTCGCCAAAACTAGTGTTCTTTATTAGTGCCTCTCACAAAAGATCC	21	+	16173918-16173967	21q21.1a	Homo sapiens ubiquitin specific peptidase 25 (USP25), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10644437] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10644437] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 10644437] [evidence TAS]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	USP21	USP21
Homo sapiens	RefSeq	NM_024536.4	ILMN_22953	CHPF	NM_024536.4	NM_024536.4		79586	34222219	NM_024536.4	CHPF	NP_078812.2	ILMN_1731353	0004250291	S	2730	CCCCCTGACGCTGCTGATTCGGGCTGTGGCCTCCACGTATTTATGCAGTA	2	-	220112075-220112124	2q35f	Homo sapiens chondroitin polymerizing factor (CHPF), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP [goid 47238] [evidence IEA]; Catalysis of the reaction: N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,3)-N-acetyl-beta-D-galactosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50510] [evidence IEA]	FLJ22678; CSS2	CSS2; FLJ22678
Homo sapiens	RefSeq	NM_007286.3	ILMN_28028	SYNPO	NM_007286.3	NM_007286.3		11346	40353726	NM_007286.3	SYNPO	NP_009217.3	ILMN_1711491	0003800653	S	3242	CCCGGGAGGGCAGAGCCAGAAGAAGGCTCATTAGACCTGGGGGACCCAAA	5	+	150016863-150016912	5q33.1c	Homo sapiens synaptopodin (SYNPO), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [pmid 15841212] [evidence TAS]; The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of the assembly of actin filament bundles [goid 32233] [evidence ISS]; Any process that modulates the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51492] [evidence ISS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15841212] [evidence IPI]	KIAA1029	KIAA1029
Homo sapiens	RefSeq	XM_936401.1	ILMN_41566	LOC647335	XM_936401.1	XM_936401.1		647335	88987402	XM_936401.1	LOC647335	XP_941494.1	ILMN_1706277	0006660167	S	174	GTCCACTTCAAAAGCAGGGCCTACCAAGCCTGTGCCCACCCGGAACTCGT					PREDICTED: Homo sapiens similar to T-box 1 isoform C (LOC647335), mRNA.					
Homo sapiens	RefSeq	NM_001033719.1	ILMN_11891	ZNF404	NM_001033719.2	NM_001033719.2		342908	154759252	NM_001033719.2	ZNF404	NP_001028891.2	ILMN_1682227	0000510719	S	1242	GCAATGTGGGAAAGCCTTCAGTCGTGTTGGAGACCTTAAGACACATCAAT	19	-	49068914-49068963	19q13.31b	Homo sapiens zinc finger protein 404 (ZNF404), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC120455	MGC120455
Homo sapiens	RefSeq	NM_002542.4	ILMN_15380	OGG1	NM_002542.4	NM_002542.4		4968	21396494	NM_002542.4	OGG1	NP_002533.1	ILMN_1706652	0001440482	A	1441	CTAGCGGATCAAGTATGGACACTGACTCAGACTGAGGAGCAGCTCCACTG	3	+	9767666-9767715	3p25.3c	Homo sapiens 8-oxoguanine DNA glycosylase (OGG1), nuclear gene encoding mitochondrial protein, transcript variant 1a, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10583946] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9223305] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 9190902] [evidence TAS]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The disruption of the bond between the sugar in the backbone and the A or G base, causing the base to be removed and leaving a depurinated sugar [goid 45007] [pmid 10583946] [evidence EXP]	Interacting selectively with damaged DNA [goid 3684] [pmid 9223305] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [pmid 9223305] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15518571] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [evidence IEA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [pmid 10583946] [evidence EXP]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [pmid 9190902] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	HOGG1; OGH1; MUTM; HMMH	HOGG1; OGH1; MUTM; HMMH
Homo sapiens	RefSeq	NM_001010912.1	ILMN_29868	C10ORF120	NM_001010912.1	NM_001010912.1		399814	58218974	NM_001010912.1	C10orf120	NP_001010912.1	ILMN_1767828	0003610523	S	818	TCGCAAATCATTCCTCCCCGCAAAGAAACCGGAACGGTCCATCGCAGGCC	10	-	124457421-124457470	10q26.13b	Homo sapiens chromosome 10 open reading frame 120 (C10orf120), mRNA.				bA318C4.1	bA318C4.1
Homo sapiens	RefSeq	NM_017772.2	ILMN_19841	TBC1D22B	NM_017772.2	NM_017772.2		55633	40068062	NM_017772.2	TBC1D22B	NP_060242.2	ILMN_2123730	0007400070	S	3136	TCCTGGGAAGCCGAGCAGTGTCCCTGGTGGGTAACACCCTCAAGTCTCTT	6	+	37300420-37300469	6p21.2c	Homo sapiens TBC1 domain family, member 22B (TBC1D22B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	dJ744I24.2; DKFZp762J0110; C6orf197; MGC125627; MGC125626; FLJ20337; RP4-744I24.2	dJ744I24.2; DKFZp762J0110; C6orf197; MGC125627; MGC125626; FLJ20337; RP4-744I24.2
Homo sapiens	RefSeq	XM_930986.1	ILMN_181411	LOC727935	XM_001126418.1	XM_001126418.1		727935	113425128	XM_001126418.1	LOC727935	XP_001126418.1	ILMN_1775307	0006940296	I	180	AGGGGAAGATGTCCATGTCCGGGTTCAAGGCCAAACCGAAGTTACTGGCT	15	+	28652402-28652451	15q13.2b	PREDICTED: Homo sapiens similar to CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion (LOC727935), mRNA.					
Homo sapiens	RefSeq	XM_931257.1	ILMN_181411	LOC727935	XM_001126418.1	XM_001126418.1		727935	113425128	XM_001126418.1	LOC727935	XP_001126418.1	ILMN_1691616	0006060192	A	480	CACCTGTTGTTGAGGCCTTCCCTAACAGTCCCAGAACTCCTACATTGCCT	15	+	28676220-28676233:28679597-28679632	15q13.2b	PREDICTED: Homo sapiens similar to CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion (LOC727935), mRNA.					
Homo sapiens	RefSeq	NM_170725.2	ILMN_751	PGBD2	NM_170725.2	NM_170725.2		267002	62953121	NM_170725.2	PGBD2	NP_733843.1	ILMN_1686326	0002230465	I	382	GTCCTGTGTGAGGACTCTGGCACCGGGGAGGATAATGACGACCTGGAGCT	1	+	247177641-247177690	1q44f	Homo sapiens piggyBac transposable element derived 2 (PGBD2), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	XR_042486.1	ILMN_347380	LOC728312	XR_042486.1	XR_042486.1		728312	169217643	XR_042486.1	LOC728312		ILMN_3227226	0007330372	A	453	GGACTGCATCCTTCGCGACACCTCCGAGGACCTGGGACTCCAGTGTGACG					PREDICTED: Homo sapiens misc_RNA (LOC728312), miscRNA.					
Homo sapiens	RefSeq	XM_291054.3	ILMN_174629	LOC339879	XM_001133099.1	XM_001133099.1		339879	113415107	XM_001133099.1	LOC339879	XP_001133099.1	ILMN_1739744	0003060743	S	2083	TCTGCCCCAGCACTTGGCACAGCAGGACAGAAGCAGAGATCTGAACCCAC				3p12.3d	PREDICTED: Homo sapiens similar to beta-1,4-mannosyltransferase (LOC339879), mRNA.					
Homo sapiens	Unigene	Hs.558488	ILMN_113256	HS.558488	Hs.558488		Hs.558488		34978851	AY375451			ILMN_1843100	0007400037	S	347	GCGCGAAGAGCAACTATCAGTTAATCTGGGGCGCTGGGACCAAGCTAATT	14	+	21819470-21819474:22047431-22047475		Homo sapiens T-cell receptor alpha chain-like protein mRNA, complete cds					
Homo sapiens	RefSeq	NM_001009565.1	ILMN_1746	CDKL4	NM_001009565.1	NM_001009565.1		344387	57222268	NM_001009565.1	CDKL4	NP_001009565.1	ILMN_1769769	0000670253	S	1334	CTTCCATCTTTTCACCCACAGCAGGCACCTAAGTCTGCCTTTCCTAGGCT	2	-	39405871-39405920	2p22.1c	Homo sapiens cyclin-dependent kinase-like 4 (CDKL4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_006593.2	ILMN_163847	TBR1	NM_006593.2	NM_006593.2		10716	22547231	NM_006593.2	TBR1	NP_006584.1	ILMN_1739366	0004070332	S	2768	TGTTGACTCTAGAACCTGGACCCACCCAGCGCGTCCTTTCTTATCCCCGA	2	+	161989401-161989450	2q24.2c	Homo sapiens T-box, brain, 1 (TBR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7619531] [evidence TAS]	TES-56; MGC141978	TES-56; MGC141978
Homo sapiens	RefSeq	NM_138694.2	ILMN_9778	PKHD1	NM_138694.3	NM_138694.3		5314	126131101	NM_138694.3	PKHD1	NP_619639.3	ILMN_1720034	0001010689	I	15756	ACTGCCCAGTGAGGCCACCAAGGACCAAGAACAGTTGAGCTCTCTCAGGG	6	-	51768439-51768488	6p12.2a	Homo sapiens polycystic kidney and hepatic disease 1 (autosomal recessive) (PKHD1), transcript variant 1, mRNA.	A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [pmid 14983006] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 16243292] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [pmid 11919560] [evidence TAS]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISS]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 11919560] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11919560] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16243292] [evidence IPI]	DKFZp686C01112; ARPKD; TIGM1; FCYT; FLJ46150	ARPKD; TIGM1; FCYT
Homo sapiens	RefSeq	NM_152713.2	ILMN_17585	STT3A	NM_152713.2	NM_152713.2		3703	34303951	NM_152713.2	STT3A	NP_689926.1	ILMN_1746090	0002570692	S	2052	GCCAAGCGTCCTCCAGGCTTTGACCGTGTCCGAAATGCTGAGATTGGGAA	11	+	124993663-124993666:124995116-124995161	11q24.2b	Homo sapiens STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) (STT3A), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [pmid 12887896] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [pmid 12887896] [evidence IDA]	Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [pmid 12887896] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	STT3-A; TMC; ITM1; FLJ27038; MGC9042	STT3-A; TMC; ITM1; FLJ27038; MGC9042
Homo sapiens	RefSeq	NM_004393.1	ILMN_16432	DAG1	NM_004393.2	NM_004393.2		1605	148539834	NM_004393.2	DAG1	NP_004384.2	ILMN_1658425	0002060091	S	5184	GGCCTTCCAAACAGCTCCGTCGCCCCTAGCAACTCCACCATTGGGCACTG	3	+	49547714-49547763	3p21.31d	Homo sapiens dystroglycan 1 (dystrophin-associated glycoprotein 1) (DAG1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 1741056] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8798547] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8798547] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 1741056] [evidence TAS]; A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin [goid 16011] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]	The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 1741056] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 1406935] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9417121] [evidence IPI]	AGRNR; 156DAG; A3a; DAG	AGRNR; 156DAG; A3a; DAG
Homo sapiens	RefSeq	XM_945117.1	ILMN_16432	DAG1	NM_004393.2	NM_004393.2		1605	148539834	NM_004393.2	DAG1	NP_004384.2	ILMN_1663963	0002510064	S	111	CCGCCCTTGCGCTCAGCGCCCTCTCACCGCCCGGTACGTGCTCGCGCGAA	3	+	49482679-49482728	3p21.31d	Homo sapiens dystroglycan 1 (dystrophin-associated glycoprotein 1) (DAG1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 1741056] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8798547] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8798547] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 1741056] [evidence TAS]; A protein complex that includes alpha- and beta-dystroglycan, which are alternative products of the same gene; the laminin-binding component of the dystrophin-associated glycoprotein complex, providing a link between the subsarcolemmal cytoskeleton (in muscle cells) and the extracellular matrix. Alpha-dystroglycan is an extracellular protein binding to alpha-laminin and to beta-dystroglycan; beta-dystroglycan is a transmembrane protein which binds alpha-dystroglycan and dystrophin [goid 16011] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]	The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 1741056] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 1406935] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9417121] [evidence IPI]	AGRNR; 156DAG; A3a; DAG	
Homo sapiens	RefSeq	NM_182572.2	ILMN_164035	ZSCAN1	NM_182572.3	NM_182572.3		284312	110431335	NM_182572.3	ZSCAN1	NP_872378.3	ILMN_1716999	0002630593	S	1837	ATTTCACTGTGGATATCCCTGAGGCCATGAGGGTGGGAGCCGGCCTGGGC	19	+	58565782-58565831	19q13.43c	Homo sapiens zinc finger and SCAN domain containing 1 (ZSCAN1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC104472; MZF-1; FLJ33779	MZF-1; FLJ33779
Homo sapiens	Unigene	Hs.544881	ILMN_108206	HS.544881	Hs.544881		Hs.544881		19590817	BM973226			ILMN_1907218	0006770739	S	321	AGCACCTTCTCTCCTCAAagggggtggtggctggggctatgggtagggct	7	+	127692123-127692163		UI-CF-EC1-abw-d-18-0-UI.s1 UI-CF-EC1 Homo sapiens cDNA clone UI-CF-EC1-abw-d-18-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.562367	ILMN_115497	HS.562367	Hs.562367		Hs.562367		18982165	BM672267			ILMN_1840036	0002000397	S	290	AGCCATCCCTGGGGGCTAAATTTCAGGATAAAAAGGGAGTTGAAGTGTGC	11	-	41761865-41761914		UI-E-CL1-ael-a-08-0-UI.s1 UI-E-CL1 Homo sapiens cDNA clone UI-E-CL1-ael-a-08-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_932475.1	ILMN_42744	LOC644873	XM_932475.1	XM_932475.1		644873	88984928	XM_932475.1	LOC644873	XP_937568.1	ILMN_1762292	0000870392	S	179	CCCCGTGCGAAGAGCGCGGCCAGCCAGTCCGCAAAGGGCCTCGGGCAGTG	5	-	127447105-127447154		PREDICTED: Homo sapiens hypothetical protein LOC644873 (LOC644873), mRNA.					
Homo sapiens	RefSeq	XM_496659.2	ILMN_46825	LOC440978	XM_496659.2	XM_496659.2		440978	88965772	XM_496659.2	LOC440978	XP_496659.2	ILMN_1698578	0005960048	S	61	TGCTATGGTCCCTCCGCAGTCAGGCCCCCATTGCCTGGGCTGCAGCCAGA	3	+	131402628-131402677		PREDICTED: Homo sapiens similar to alpha 3 type VI collagen isoform 1 precursor (LOC440978), mRNA.					
Homo sapiens	RefSeq	XM_932721.1	ILMN_35670	LOC653264	XM_932721.2	XM_932721.2		653264	113429331	XM_932721.2	LOC653264	XP_937814.1	ILMN_1714155	0001050148	I	16	CAGTGTGGATTGTGCCTTCACCCTGGAATGTTTATGCCCTATCACCATGG	22	-	20010119-20010168	22q11.21f	PREDICTED: Homo sapiens similar to Nucleosome-binding protein 1 (Nucleosome-binding protein 45) (NBP-45) (GARP45 protein), transcript variant 2 (LOC653264), mRNA.					
Homo sapiens	RefSeq	NR_015376.2	ILMN_371104	NCRNA00200	NR_015376.2	NR_015376.2		399706	219555670	NR_015376.2	NCRNA00200		ILMN_3243274	0002810619	S	2261	GTGTAATGATCCAATCAGGGTAGTGTGTGTGCCCATTTCCTCAAGGGTGG	10	+	1210439-1210488	10p15.3c	Homo sapiens non-protein coding RNA 200 (NCRNA00200), non-coding RNA.					
Homo sapiens	RefSeq	NM_004526.2	ILMN_183916	MCM2	NM_004526.2	NM_004526.2		4171	33356546	NM_004526.2	MCM2	NP_004517.2	ILMN_1681503	0006770408	S	3118	GAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTGCTGC	3	+	127340962-127341011	3q21.3b	Homo sapiens minichromosome maintenance complex component 2 (MCM2), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 8798650] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8175912] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10846177] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8175912] [evidence TAS]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 8175912] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8175912] [evidence TAS]; Interacting selectively with the DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally [goid 3688] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11095689] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0030; D3S3194; MGC10606; CCNL1; BM28; MITOTIN; CDCL1; cdc19	MGC10606; CCNL1; MITOTIN; CDCL1; KIAA0030; D3S3194; BM28; cdc19
Homo sapiens	RefSeq	NM_139242.2	ILMN_166676	MTFMT	NM_139242.2	NM_139242.2		123263	31543267	NM_139242.2	MTFMT	NP_640335.1	ILMN_2175831	0001940020	S	1500	TGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTATGATTACAGACGTGAG	15	-	63082087-63082136	15q22.31b	Homo sapiens mitochondrial methionyl-tRNA formyltransferase (MTFMT), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA [goid 4479] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FMT1	FMT1
Homo sapiens	RefSeq	NM_138384.1	ILMN_19544	MTG1	NM_138384.2	NM_138384.2		92170	93277112	NM_138384.2	MTG1	NP_612393.2	ILMN_1775328	0003420088	S	1467	AGGTGCACCGTAGTGCCTTGGGCCTGTGTGTTAAAGCTGCTCTCACCAGT	10	+	135084017-135084066	10q26.3f	Homo sapiens mitochondrial GTPase 1 homolog (S. cerevisiae) (MTG1), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	GTP; GTPBP7; RP11-108K14.2	GTP; GTPBP7; RP11-108K14.2
Homo sapiens	RefSeq	NM_138271.1	ILMN_175571	ATRX	NM_138271.1	NM_138271.1		546	20336206	NM_138271.1	ATRX	NP_612115.1	ILMN_1726576	0007550187	I	701	GCTGTGGTGATATCCTTATATTTGATTCCTTGTGCACATGTGGGAGAAAA	X	-	76833023-76833072	Xq21.1a	Homo sapiens alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) (ATRX), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7874112] [evidence TAS]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [pmid 10570185] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 7697714] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10742099] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 7697714] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7697714] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 7697714] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12953102] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SHS; XNP; MRXS3; ZNF-HX; MRXHF1; RAD54L; XH2; ATR2; SFM1; RAD54; MGC2094	XNP; ZNF-HX; XH2; ATR2; SHS; MRXS3; RAD54L; MGC2094; RAD54
Homo sapiens	RefSeq	NM_014231.3	ILMN_10663	VAMP1	NM_014231.3	NM_014231.3		6843	40549444	NM_014231.3	VAMP1	NP_055046.1	ILMN_2405756	0002350541	A	2139	TGAAGAGCTGGAAGAAAGCAGTCAGTACCCTCCCAACGGCCCCCCTCGAA	12	-	6571950-6571999	12p13.31d	Homo sapiens vesicle-associated membrane protein 1 (synaptobrevin 1) (VAMP1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1976629] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9920726] [evidence IPI]	SYB1; VAMP-1; DKFZp686H12131	SYB1; VAMP-1; DKFZp686H12131
Homo sapiens	RefSeq	NM_007375.3	ILMN_907	TARDBP	NM_007375.3	NM_007375.3		23435	42741653	NM_007375.3	TARDBP	NP_031401.1	ILMN_1677532	0002570139	S	3886	TCGGGGACCTCCAAAGACTAAACTGACAAGCCTTCAAGGAGCCCAGGGGT	1	+	11007805-11007854	1p36.22b	Homo sapiens TAR DNA binding protein (TARDBP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7745706] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7745706] [evidence TAS]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 8599929] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8599929] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7745706] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 8599929] [evidence TAS]	TDP-43	TDP-43
Homo sapiens	RefSeq	NM_013450.1	ILMN_20026	BAZ2B	NM_013450.2	NM_013450.2		29994	94681062	NM_013450.2	BAZ2B	NP_038478.2	ILMN_1720850	0000450075	S	7947	TGTAACCACTGTGTTTTATCTACTGTGTGTTGTGGTGGCCTGTTGGAGGC	2	-	160175945-160175994	2q24.2a	Homo sapiens bromodomain adjacent to zinc finger domain, 2B (BAZ2B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP434H071; WALp4; DKFZp762I0516; FLJ45644	DKFZP434H071; DKFZp762I0516
Homo sapiens	RefSeq	XM_001716286.1	ILMN_348989	LOC100132923	XM_001716286.1	XM_001716286.1		100132923	169172924	XM_001716286.1	LOC100132923	XP_001716338.1	ILMN_3246742	0002490273	S	1482	AGGGCTTTGTGCTATTACAATATCCTTCAAATAAAGTGACGGTCTGGTGG	8	+	12046993-12047042	8p23.1a	PREDICTED: Homo sapiens similar to hCG1993470 (LOC100132923), mRNA.					
Homo sapiens	RefSeq	NM_014739.1	ILMN_162019	BCLAF1	NM_001077440.1	NM_001077440.1		9774	117938250	NM_001077440.1	BCLAF1	NP_001070908.1	ILMN_1775192	0003800176	S	5108	AGAAGGCCATGACTCTTTAGGTGTGTATGTGTACCTTTCAGCATCCTAGG	6	-	136621646-136621695	6q23.3b	Homo sapiens BCL2-associated transcription factor 1 (BCLAF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10330179] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10330179] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10330179] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15009215] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10330179] [evidence TAS]	BTF; bK211L9.1; KIAA0164	BTF; bK211L9.1; KIAA0164
Homo sapiens	RefSeq	XM_940798.1	ILMN_162019	BCLAF1	NM_001077440.1	NM_001077440.1		9774	117938250	NM_001077440.1	BCLAF1	NP_001070908.1	ILMN_1690321	0006760209	I	1444	GGATGACACAGAGGAGACAGAGGATTATAGACAGTTCAGGAAGTCAGTCC	6	-	136639109-136639158	6q23.3b	Homo sapiens BCL2-associated transcription factor 1 (BCLAF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10330179] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10330179] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10330179] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15009215] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10330179] [evidence TAS]	BTF; bK211L9.1; KIAA0164	
Homo sapiens	RefSeq	NM_207472.1	ILMN_23033	FLJ46020	NM_207472.1	NM_207472.1		400863	46409573	NM_207472.1	FLJ46020	NP_997355.1	ILMN_1786559	0001990156	S	2068	GTCACCGTTGTGTCCCTGACTCCTAAAATGCTGACGGTGTGGCCAGCTGC	21	+	34257937-34257986	21q22.11c	Homo sapiens FLJ46020 protein (FLJ46020), mRNA.					
Homo sapiens	Unigene	Hs.575222	ILMN_127403	HS.575222	Hs.575222		Hs.575222		79817486	DA160026			ILMN_1909965	0001300026	S	406	GGGAAACTCATGCCCAACTTCTAGGCAGATAAAGGGAGGGTGGAGAACTC	5	-	38865412-38865461		DA160026 BRAMY2 Homo sapiens cDNA clone BRAMY2019928 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001006618.1	ILMN_26847	MAPKAP1	NM_001006617.1	NM_001006617.1		79109	56788406	NM_001006617.1	MAPKAP1	NP_001006618.1	ILMN_1691526	0001660280	A	1011	TGTCAGTGCCTACTGCCTGCATATTGCTGAGGATGATGGGGAGGTGGACA	9	-	128322032-128322081	9q33.3a	Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15718470] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [pmid 1849280] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC2745; MIP1; SIN1b; SIN1g; SIN1	MGC2745; MIP1; SIN1b; SIN1g; SIN1
Homo sapiens	RefSeq	NM_013358.1	ILMN_1296	PADI1	NM_013358.2	NM_013358.2		29943	122056684	NM_013358.2	PADI1	NP_037490.2	ILMN_1732323	0002480706	S	2283	AATGCACCTCATTCTTCCCTGGCCTCTTTCCCACCCACAGCCCCCAGAGG	1	+	17443524-17443573	1p36.13e	Homo sapiens peptidyl arginine deiminase, type I (PADI1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]	Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PDI1; HPAD10; PAD1; PDI	PDI1; PDI; HPAD10
Homo sapiens	RefSeq	NR_029666.1	ILMN_387817	MIR30B	NR_029666.1	NR_029666.1		407030	262205236	NR_029666.1	MIR30B		ILMN_3308370	0000240711	S	31	CTCAGCTGTAATACATGGATTGGCTGGGAGGTGGATGTTTACTTCAGCTG				8q24.22d	Homo sapiens microRNA 30b (MIR30B), microRNA.					
Homo sapiens	RefSeq	NM_001004440.1	ILMN_6925	FAM19A3	NM_001004440.1	NM_001004440.1		284467	52486733	NM_001004440.1	FAM19A3	NP_001004440.1	ILMN_1714271	0001580673	I	343	TTGGCTGCCCACTGTGCTCGTAGAGACCCTAGAGCTGCACTCCGCCTCCT	1	+	113068098-113068147	1p13.2c	Homo sapiens family with sequence similarity 19 (chemokine (C-C motif)-like), member A3 (FAM19A3), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			TAFA3; MGC138473; RP11-426L16.6; TAFA-3	TAFA3; MGC138473; RP11-426L16.6; TAFA-3
Homo sapiens	RefSeq	NM_015520.1	ILMN_165051	MAGI1	NM_015520.1	NM_015520.1		9223	74272281	NM_015520.1	MAGI1	NP_056335.1	ILMN_1670343	0001070296	I	4261	TATCGCTGCATGTATGAGAAATGAAAAGCTCGGGGAGGCTTGCTTCTACC	3	-	65403551-65403564:65408737-65408772	3p14.1d-p14.1c	Homo sapiens membrane associated guanylate kinase, WW and PDZ domain containing 1 (MAGI1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9647739] [evidence TAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9647739] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9647739] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9647739] [evidence TAS]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9647739] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	TNRC19; MAGI-1; BAP1; WWP3; BAIAP1; AIP3	TNRC19; MAGI-1; BAP1; WWP3; BAIAP1; AIP3
Homo sapiens	RefSeq	NM_032962.2	ILMN_24016	CCL14	NM_032962.2	NM_032962.2		6358	34335175	NM_032962.2	CCL14	NP_116738.1	ILMN_3192001	0001190390	A	1105	AGCGGATTATGGATTACTATGAGACCAACAGCCAGTGCTCCAAGCCCGGA				17q12b	Homo sapiens chemokine (C-C motif) ligand 14 (CCL14), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8551235] [evidence TAS]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 8551235] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8551235] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8551235] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	SCYL2; NCC-2; MCIF; HCC-3; CC-3; SCYA14; CC-1; SY14; NCC2; HCC-1; CKb1	NCC-2; CC-1; SY14; SCYL2; MCIF; HCC-3; CC-3; SCYA14; NCC2; HCC-1; CKb1
Homo sapiens	RefSeq	NM_032962.2	ILMN_24016	CCL14	NM_032962.2	NM_032962.2		6358	34335175	NM_032962.2	CCL14	NP_116738.1	ILMN_3268472	0000360327	M	260	TTGTCCTCTACTTTCTGTTGCACTCTCAGCCTTGTTCTCTTTTTAGAAAC				17q12b	Homo sapiens chemokine (C-C motif) ligand 14 (CCL14), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8551235] [evidence TAS]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 8551235] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8551235] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8551235] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	SCYL2; NCC-2; MCIF; HCC-3; CC-3; SCYA14; CC-1; SY14; NCC2; HCC-1; CKb1	NCC-2; CC-1; SY14; SCYL2; MCIF; HCC-3; CC-3; SCYA14; NCC2; HCC-1; CKb1
Homo sapiens	RefSeq	NM_001023582.1	ILMN_8725	RPGR	NM_001023582.1	NM_001023582.1		6103	66932996	NM_001023582.1	RPGR	NP_001018876.1	ILMN_1768097	0001770592	A	2566	GATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATCCCACCAAC	X	-	38013862-38013911	Xp11.4e	Homo sapiens retinitis pigmentosa GTPase regulator (RPGR), transcript variant B, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 9990021] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 96241570] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9990021] [evidence TAS]	COD1; CORDX1; XLRP3; RP15; CRD; orf15; PCDX; RP3	COD1; CORDX1; XLRP3; RP15; CRD; orf15; PCDX; RP3
Homo sapiens	RefSeq	XM_001716375.1	ILMN_353184	LOC100131416	XM_001716375.1	XM_001716375.1		100131416	169202941	XM_001716375.1	LOC100131416	XP_001716427.1	ILMN_3296811	0007160482	M	680	GTGGTAAAAAGAGGGACAGTACCCCCAGCCTGCGTCAGGGCTACCCCGGC				11q13.1c	PREDICTED: Homo sapiens hypothetical LOC100131416 (LOC100131416), mRNA.					
Homo sapiens	RefSeq	NM_021978.2	ILMN_138408	ST14	NM_021978.2	NM_021978.2		6768	21264629	NM_021978.2	ST14	NP_068813.1	ILMN_1699887	0004260278	S	2814	CACCAGCGCCCCCAGAACATACACTGTGAACTCAATCTCCAGGGCTCCAA	11	+	129585022-129585071	11q24.3c	Homo sapiens suppression of tumorigenicity 14 (colon carcinoma, matriptase, epithin) (ST14), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10831593] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10373424] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10831593] [evidence TAS]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10373424] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TADG-15; MTSP1; MT-SP1; PRSS14; MTSP-1; SNC19; HAI	TADG-15; MTSP1; MT-SP1; PRSS14; MTSP-1; SNC19; HAI
Homo sapiens	RefSeq	NM_002028.3	ILMN_171968	FNTB	NM_002028.3	NM_002028.3		2342	42476119	NM_002028.3	FNTB	NP_002019.1	ILMN_1728517	0005820240	S	2634	TGGGCCATCTGTCTACTGACCTGGCCTTCATGTAAGCAGCTGTGGGCTGC	14	+	64598938-64598987	14q23.3a	Homo sapiens farnesyltransferase, CAAX box, beta (FNTB), mRNA.		Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The covalent attachment of a farnesyl moiety to a protein amino acid [goid 18347] [pmid 8494894] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence IEA]	Catalysis of the reaction: trans,trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate [goid 4311] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [pmid 8276393] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15170324] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC31935; FPTB	MGC31935; FPTB
Homo sapiens	RefSeq	NM_001008901.1	ILMN_25614	GTSF1L	NM_176791.3	NM_176791.3		149699	57165362	NM_176791.3	GTSF1L	NP_789761.1	ILMN_1812548	0003930687	A	488	GGCTGTTTGTGTCAACAGGAGCGCTGTGGAAGAAGAGGACACCGAGAACC	20	-	42355105-42355154	20q13.12a	Homo sapiens gametocyte specific factor 1-like (GTSF1L), transcript variant 1, mRNA.				FAM112A; MGC50820; dJ1028D15.4; C20orf65	MGC50820; FAM112A; dJ1028D15.4; C20orf65
Homo sapiens	RefSeq	NM_176791.3	ILMN_25614	GTSF1L	NM_176791.3	NM_176791.3		149699	57165362	NM_176791.3	GTSF1L	NP_789761.1	ILMN_1690537	0007320202	I	599	CCTTCCCAGCCCCGATATCTGGAATGTCGATGGCGCTAATTGCCAGCATG	20	-	42354994-42355043	20q13.12a	Homo sapiens gametocyte specific factor 1-like (GTSF1L), transcript variant 1, mRNA.				FAM112A; MGC50820; dJ1028D15.4; C20orf65	MGC50820; FAM112A; dJ1028D15.4; C20orf65
Homo sapiens	RefSeq	NM_015913.2	ILMN_22592	TXNDC12	NM_015913.2	NM_015913.2		51060	23943808	NM_015913.2	TXNDC12	NP_056997.1	ILMN_1783753	0007160274	S	1396	GCATGCGTGTGCAGGACTGGCTGTGTGCTTGGACTCGGCTCCAGGTGGAA	1	-	52485957-52486006	1p32.3e-p32.3d	Homo sapiens thioredoxin domain containing 12 (endoplasmic reticulum) (TXNDC12), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 glutathione + protein-disulfide = oxidized glutathione + protein-dithiol [goid 19153] [evidence IEA]	AGR1; ERP19; TLP19; hAG-1; ERP18	AGR1; ERP19; TLP19; hAG-1; ERP18
Homo sapiens	RefSeq	XM_941506.1	ILMN_45504	LOC652161	XM_941506.1	XM_941506.1		652161	89037927	XM_941506.1	LOC652161	XP_946599.1	ILMN_1735804	0004010639	S	455	ACTCACCCAAGGCAGAACCCCAGGGAAGAGCAGGACACCCTCATCTACTC					PREDICTED: Homo sapiens similar to Ig heavy chain V-III region VH26 precursor (LOC652161), mRNA.					
Homo sapiens	RefSeq	NM_183374.2	ILMN_8738	CYP26C1	NM_183374.2	NM_183374.2		340665	62952501	NM_183374.2	CYP26C1	NP_899230.2	ILMN_1702769	0003290204	S	1516	CTCTTTTTCCACCCCCTCACGCCTTCGGTTGCGGGGAATGGGCTATGCCT	10	+	94818391-94818440	10q23.33a	Homo sapiens cytochrome P450, family 26, subfamily C, polypeptide 1 (CYP26C1), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 14532297] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence ISS]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence ISS]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of retinoic acid, one of the three components that makes up vitamin A [goid 34653] [pmid 14532297] [evidence IDA]; The creation of a single organelle from two or more organelles [goid 48284] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity [goid 48387] [pmid 14532297] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid [goid 1972] [pmid 14532297] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA];  [goid 8401] [pmid 14532297] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ45301	FLJ45301
Homo sapiens	RefSeq	NM_002097.1	ILMN_12579	GTF3A	NM_002097.1	NM_002097.1		2971	4753158	NM_002097.1	GTF3A	NP_002088.1	ILMN_1658464	0000270619	S	1225	CGGAGAGTCACCCAACTGTGTGGAAGACAAGATGCTCTCGACAGTTGCAG	13	+	26907667-26907716	13q12.2a	Homo sapiens general transcription factor IIIA (GTF3A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 7789179] [evidence TAS]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [pmid 8063702] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 8063702] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AP2; TFIIIA	AP2; TFIIIA
Homo sapiens	RefSeq	NM_002049.2	ILMN_175198	GATA1	NM_002049.2	NM_002049.2		2623	32483408	NM_002049.2	GATA1	NP_002040.1	ILMN_1797251	0003400291	S	1231	AGGGCCTGTTAGCCACCTCATGCCTTTCCCTGGACCCCTACTGGGCTCAC	X	+	48537393-48537442	Xp11.23c	Homo sapiens GATA binding protein 1 (globin transcription factor 1) (GATA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2300555] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 2300555] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 2467208] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2104960] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ERYF1; GF1; NFE1	ERYF1; GF1; NFE1
Homo sapiens	RefSeq	NM_024881.3	ILMN_23168	SLC35E1	NM_024881.3	NM_024881.3		79939	40255010	NM_024881.3	SLC35E1	NP_079157.2	ILMN_2059173	0002900307	S	2927	TGGGAGGCTGAGGTGGGTGGATCACTGGAGTTTGAGACCACCCTGGCCAA	19	-	16523764-16523813	19p13.11f	Homo sapiens solute carrier family 35, member E1 (SLC35E1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC44954; FLJ14251	MGC44954; FLJ14251
Homo sapiens	RefSeq	NM_024881.3	ILMN_23168	SLC35E1	NM_024881.3	NM_024881.3		79939	40255010	NM_024881.3	SLC35E1	NP_079157.2	ILMN_1752333	0005390403	S	2594	CCAAGTTCCCACTGGTGATGCCTGTCTGACACGTTTTGGTATTTAGTAGG	19	-	16524097-16524146	19p13.11f	Homo sapiens solute carrier family 35, member E1 (SLC35E1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC44954; FLJ14251	MGC44954; FLJ14251
Homo sapiens	RefSeq	NM_002095.3	ILMN_4316	GTF2E2	NM_002095.4	NM_002095.4		2961	115511050	NM_002095.4	GTF2E2	NP_002086.1	ILMN_1664931	0001570538	S	1344	TCCCTGGGAGAAAGGCGCTGAGCGTGGCATGCAGGTGTCTTTGCTGTGTT	8	-	30555715-30555764	8p12e	Homo sapiens general transcription factor IIE, polypeptide 2, beta 34kDa (GTF2E2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; A transcription factor which in humans consists of a complex of two alpha and two beta chains. Recruits TFIIH to the initiation complex and helps activate both RNA polymerase II and TFIIH [goid 5673] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 1956398] [evidence TAS]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7926747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9271120] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9271120] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8999876] [evidence IPI]	TFIIE-B; FE; TF2E2	TFIIE-B; FE; TF2E2
Homo sapiens	RefSeq	NM_001023561.1	ILMN_11405	ZNF749	NM_001023561.1	NM_001023561.1		388567	66472887	NM_001023561.1	ZNF749	NP_001018855.1	ILMN_2148298	0002650332	S	1808	GCACTGGGGAGAAGCCTCATGAGTGCAGTAAATGTAGGGAATTGTTTAGG	19	+	62648397-62648446	19q13.43b	Homo sapiens zinc finger protein 749 (ZNF749), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ16360; FLJ16263	FLJ16360; FLJ16263
Homo sapiens	RefSeq	XR_038395.1	ILMN_346222	LOC728813	XR_038395.1	XR_038395.1		728813	169217533	XR_038395.1	LOC728813		ILMN_3303305	0006020041	M	602	TGCACGCAGCCAGGTGGAGGCCACTGAGCCACAGGACGTGGTGGTCTATG				10q11.22c	PREDICTED: Homo sapiens misc_RNA (LOC728813), miscRNA.					
Homo sapiens	RefSeq	XM_047499.9	ILMN_37899	RNF187	XM_928029.2	XM_928029.2		149603	113411744	XM_928029.2	RNF187	XP_933122.2	ILMN_1707372	0006110154	A	1451	CTTCCTGAAGTCCTAGCCACAGCCCATCCTCCATGAGTCCCGGCAGCTCT	1	+	226748448-226748497	1q42.13c	PREDICTED: Homo sapiens ring finger protein 187 (RNF187), mRNA.					
Homo sapiens	RefSeq	XM_939542.1	ILMN_35488	LOC650454	XM_939542.1	XM_939542.1		650454	89059271	XM_939542.1	LOC650454	XP_944635.1	ILMN_1705652	0000520020	S	241	CCCTCAAAAGTATTCTGATTTGGATGATAAATTATACTGTCACCCTTGCT					PREDICTED: Homo sapiens hypothetical protein LOC650454 (LOC650454), mRNA.					
Homo sapiens	RefSeq	NM_001017964.1	ILMN_9095	YDJC	NM_001017964.1	NM_001017964.1		150223	63054867	NM_001017964.1	YDJC	NP_001017964.1	ILMN_1812580	0003520475	A	990	TGGAACCCTCCCTACTCTGACCCCCTACAGACAACCAAGCACTAATCCCC	22	-	21982676-21982706:21982707-21982725	22q11.21f	Homo sapiens YdjC homolog (bacterial) (YDJC), mRNA.				MGC133160	MGC133160
Homo sapiens	RefSeq	NM_175066.2	ILMN_165366	DDX51	NM_175066.3	NM_175066.3		317781	154759256	NM_175066.3	DDX51	NP_778236.2	ILMN_1682323	0001070692	S	2285	AGCCTTAGTAAAACGGTGAAAAGTACTCCCAGACGGACGCGGGCACCCGT	12	-	132623522-132623571	12q24.33c	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 (DDX51), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp686N2081; MGC42193	DKFZp686N2081; MGC42193
Homo sapiens	RefSeq	XM_001714134.1	ILMN_352341	LOC100134499	XM_001714134.1	XM_001714134.1		100134499	169170415	XM_001714134.1	LOC100134499	XP_001714186.1	ILMN_3234471	0006040328	I	2253	TGGGTTGCCATGGTGATTATTCCAACTGCATTGTGGTCAGATGGAACTGG	7	-	62150007-62150056		PREDICTED: Homo sapiens similar to hCG1647535, transcript variant 1 (LOC100134499), mRNA.					
Homo sapiens	RefSeq	XM_001714134.1	ILMN_352341	LOC100134499	XM_001714134.1	XM_001714134.1		100134499	169170415	XM_001714134.1	LOC100134499	XP_001714186.1	ILMN_3219289	0006400767	A	425	AGCATGCAACGGGAGTGGGGGGTGGTGCGAATGCCTGGAGGAAGGGGCCG	7	-	62151835-62151884		PREDICTED: Homo sapiens similar to hCG1647535, transcript variant 1 (LOC100134499), mRNA.					
Homo sapiens	RefSeq	XM_936304.1	ILMN_33720	LOC642153	XM_936304.1	XM_936304.1		642153	89026480	XM_936304.1	LOC642153	XP_941397.1	ILMN_1770842	0003120167	S	391	GAGCCTCAGCACTCGGTTCAGCATTCTGTAAGACCTCAGCAGACATCTCA					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region 86T1 precursor (LOC642153), mRNA.					
Homo sapiens	RefSeq	NM_001539.2	ILMN_5819	DNAJA1	NM_001539.2	NM_001539.2		3301	49472820	NM_001539.2	DNAJA1	NP_001530.1	ILMN_1672496	0001980632	S	1338	ACATCATCCCAGAGGTGGTGTTCAGTGTCAGACCTCTTAATGGGCCAGTG	9	+	33026653-33026687:33026811-33026825	9p13.3e	Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 8334160] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 8334160] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IEA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [pmid 15082773] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	DjA1; hDJ-2; HSJ2; DJ-2; HSPF4; HSDJ; HDJ2	DjA1; hDJ-2; HSJ2; DJ-2; HSPF4; HSDJ; HDJ2
Homo sapiens	RefSeq	XM_061890.10	ILMN_169315	TRIM64	XM_061890.11	XM_061890.11		120146	113422534	XM_061890.11	TRIM64	XP_061890.9	ILMN_1768365	0002070068	S	859	ATGTACAGAGAGCTGTGGGAGACATGCCACGTGCCTGACGTGGAGCTGCT	11	+	89343237-89343286	11q14.3b	PREDICTED: Homo sapiens tripartite motif-containing 64 (TRIM64), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001018073.1	ILMN_18787	PCK2	NM_001018073.1	NM_001018073.1		5106	66346722	NM_001018073.1	PCK2	NP_001018083.1	ILMN_1802699	0007320682	I	1461	CTGCCAGGAGGCACAGAAGTCATGAACGTTTGCAGTTTCCAGTCCCAGGC	14	+	23639357-23639406	14q12a	Homo sapiens phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8645161] [evidence TAS]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 [goid 4611] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PEPCK; PEPCK2; PEPCK-M	PEPCK; PEPCK2; PEPCK-M
Homo sapiens	RefSeq	NM_001018073.1	ILMN_18787	PCK2	NM_001018073.1	NM_001018073.1		5106	66346722	NM_001018073.1	PCK2	NP_001018083.1	ILMN_1760649	0001510114	A	1297	GAGGGCATTGACCAGCCTCTTCCACCTGGTGTTACTGTGACCTCCTGGCT	14	+	23639193-23639242	14q12a	Homo sapiens phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8645161] [evidence TAS]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 [goid 4611] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PEPCK; PEPCK2; PEPCK-M	PEPCK; PEPCK2; PEPCK-M
Homo sapiens	RefSeq	NM_017745.4	ILMN_165939	BCOR	NM_017745.4	NM_017745.4		54880	21071036	NM_017745.4	BCOR	NP_060215.4	ILMN_1773117	0000510576	I	5772	GGCCATGACTGTAGAGTGGTCAGAACTGTGTGGTTGGTTTGAGGGAGCGA	X	-	39795901-39795950	Xp11.4c	Homo sapiens BCL6 co-repressor (BCOR), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10898795] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 10898795] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10898795] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10898795] [evidence IPI]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 10898795] [evidence IPI]	MGC131961; KIAA1575; FLJ20285; MGC71031; MCOPS2; FLJ38041; MAA2; ANOP2	MGC131961; MGC71031; MCOPS2; FLJ38041; MAA2; KIAA1575; FLJ20285; ANOP2
Homo sapiens	RefSeq	NM_020926.2	ILMN_165939	BCOR	NM_017745.4	NM_017745.4		54880	21071036	NM_017745.4	BCOR	NP_060215.4	ILMN_1712161	0001770435	A	3132	AAGCTGGCAAAGAGAATCGCCAACTCAGCGGGTTACGTGGGTGACCGATT	X	-	39816612-39816661	Xp11.4c	Homo sapiens BCL6 co-repressor (BCOR), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10898795] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 10898795] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10898795] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10898795] [evidence IPI]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 10898795] [evidence IPI]	MGC131961; KIAA1575; FLJ20285; MGC71031; MCOPS2; FLJ38041; MAA2; ANOP2	MGC131961; MGC71031; MCOPS2; FLJ38041; MAA2; KIAA1575; FLJ20285; ANOP2
Homo sapiens	RefSeq	NM_152540.3	ILMN_29610	SCFD2	NM_152540.3	NM_152540.3		152579	40255253	NM_152540.3	SCFD2	NP_689753.2	ILMN_1708891	0007570332	S	2813	GGTCTGCCAGGCTACTTGGAACTGTAGTGGGAAGGTGGTTGATTGGAGGG	4	-	53874661-53874687:53913522-53913544	4q12a-q12b	Homo sapiens sec1 family domain containing 2 (SCFD2), mRNA.		The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		STXBP1L1; FLJ21060; FLJ39514	STXBP1L1; FLJ21060; FLJ39514
Homo sapiens	RefSeq	NM_005110.1	ILMN_7613	GFPT2	NM_005110.1	NM_005110.1		9945	4826741	NM_005110.1	GFPT2	NP_005101.1	ILMN_1709674	0005130563	S	2560	ACTGTTCATCCTAGCTACCCATGCTCTGTGTCCAGGCTTGCTCCTGGCAG	5	-	179660707-179660756	5q35.3f	Homo sapiens glutamine-fructose-6-phosphate transaminase 2 (GFPT2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism [goid 6002] [pmid 10198162] [evidence TAS];  [goid 6112] [pmid 10198162] [evidence TAS]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]	Catalysis of the reaction: L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate [goid 4360] [pmid 10198162] [evidence TAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GFAT2; FLJ10380	GFAT2; FLJ10380
Homo sapiens	RefSeq	NM_001006618.1	ILMN_13996	MAPKAP1	NM_001006618.1	NM_001006618.1		79109	56788400	NM_001006618.1	MAPKAP1	NP_001006619.1	ILMN_2268068	0000060102	I	1457	TCCTCTGCAGTGTGATTTAGCACCCTGGATCCCCATCAACCAGTTTTGGC	9	-	128283829-128283878	9q33.3a	Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 6, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15718470] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [pmid 1849280] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC2745; MIP1; SIN1b; SIN1g; SIN1	MGC2745; MIP1; SIN1b; SIN1g; SIN1
Homo sapiens	RefSeq	NM_001006618.1	ILMN_13996	MAPKAP1	NM_001006618.1	NM_001006618.1		79109	56788400	NM_001006618.1	MAPKAP1	NP_001006619.1	ILMN_2360229	0007210020	A	1119	GGCCCTGGTTGAAAAGTACTCATCTCCTGGTCTGACATCCAAAGAGTCAC	9	-	128321924-128321973	9q33.3a	Homo sapiens mitogen-activated protein kinase associated protein 1 (MAPKAP1), transcript variant 6, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15718470] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [pmid 1849280] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC2745; MIP1; SIN1b; SIN1g; SIN1	MGC2745; MIP1; SIN1b; SIN1g; SIN1
Homo sapiens	RefSeq	NM_001006623.1	ILMN_6704	WDR33	NM_001006623.1	NM_001006623.1		55339	55743158	NM_001006623.1	WDR33	NP_001006624.1	ILMN_1745852	0001030201	I	3230	CCTCTGTCCAACTGGAGTATCTGGCTATGGGCCATGGGTACTCATATACC	2	-	128493256-128493305	2q14.3e	Homo sapiens WD repeat domain 33 (WDR33), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11162572] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Pathways for DNA repair which occur after DNA has replicated, e.g. mismatch repair, and which involve translesion synthesis (TLS-type) DNA polymerases [goid 6301] [pmid 11162572] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 11162572] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	WDC146; FLJ11294	WDC146; FLJ11294
Homo sapiens	RefSeq	NM_001006622.1	ILMN_6704	WDR33	NM_001006623.1	NM_001006623.1		55339	55743158	NM_001006623.1	WDR33	NP_001006624.1	ILMN_1716086	0000150070	A	659	CTCACGACAGCCCAGTGAGGGCCATGACGTGGTCACATAATGACATGTGG	2	-	128522502-128522551	2q14.3e	Homo sapiens WD repeat domain 33 (WDR33), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11162572] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Pathways for DNA repair which occur after DNA has replicated, e.g. mismatch repair, and which involve translesion synthesis (TLS-type) DNA polymerases [goid 6301] [pmid 11162572] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 11162572] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	WDC146; FLJ11294	WDC146; FLJ11294
Homo sapiens	RefSeq	NM_001024603.1	ILMN_20907	LOC154872	NM_001024603.1	NM_001024603.1		154872	66912169	NM_001024603.1	LOC154872	NP_001019774.1	ILMN_1779698	0005870167	S	107	GAGACGTTAAAGTGAAGCAGGCAGAAATCCGCTTCTGAGAGAGGGCTTCC	7	-	124217944-124217993	7q31.33a	Homo sapiens hypothetical LOC154872 (LOC154872), mRNA.					
Homo sapiens	RefSeq	XM_001722756.1	ILMN_340498	LOC100128714	XM_001722756.1	XM_001722756.1		100128714	169207843	XM_001722756.1	LOC100128714	XP_001722808.1	ILMN_3183065	0005270192	A	460	CTGGGTCTTGCTCTCTGACAAAGGGGCTACAGCGCTCCTTCCTGGTACAC				15q12a	PREDICTED: Homo sapiens hypothetical protein LOC100128714 (LOC100128714), mRNA.					
Homo sapiens	RefSeq	NM_001001483.1	ILMN_22693	ZDHHC13	NM_001001483.1	NM_001001483.1		54503	47933347	NM_001001483.1	ZDHHC13	NP_001001483.1	ILMN_1684663	0000650324	A	1725	GTGTGGCTGCTTTGGCTTGGTGAAGCCCTGTGTGGTAGATTGGACATCAC	11	+	19150847-19150896	11p15.1c	Homo sapiens zinc finger, DHHC-type containing 13 (ZDHHC13), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HIP3RP; FLJ10941; FLJ10852; HIP14L; MGC64994	HIP3RP; FLJ10941; FLJ10852; HIP14L; MGC64994
Homo sapiens	RefSeq	NM_001001483.1	ILMN_22693	ZDHHC13	NM_001001483.1	NM_001001483.1		54503	47933347	NM_001001483.1	ZDHHC13	NP_001001483.1	ILMN_1785831	0005550524	A	1792	CACCCAGCCAGGGAGAAGGTTCTTCGCTCAGTATGAAGAAAAGCAACCCA	11	+	19150914-19150943:19153945-19153964	11p15.1c	Homo sapiens zinc finger, DHHC-type containing 13 (ZDHHC13), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HIP3RP; FLJ10941; FLJ10852; HIP14L; MGC64994	HIP3RP; FLJ10941; FLJ10852; HIP14L; MGC64994
Homo sapiens	RefSeq	NM_001080416.1	ILMN_170039	MYBL1	NM_001080416.1	NM_001080416.1		4603	122937230	NM_001080416.1	MYBL1	NP_001073885.1	ILMN_3241046	0006110564	S	4674	ATGCCAGACATAACATGTAGCAGCCATACTTGCATGGAAACTGACTACAC	8	-	67637123-67637172	8q13.1b	Homo sapiens v-myb myeloblastosis viral oncogene homolog (avian)-like 1 (MYBL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8058310] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 8058310] [evidence NAS]	MGC120061; MGC120059; AMYB; A-MYB	MGC120059; AMYB; MGC120061; A-MYB
Homo sapiens	RefSeq	NM_182528.1	ILMN_2194	C1QL2	NM_182528.2	NM_182528.2		165257	141802463	NM_182528.2	C1QL2	NP_872334.1	ILMN_1756236	0007210041	S	1597	TTGGAAAAGACAAATCCCTGCGTCCTCCCTGCCCCGCTCCTGGCCTCAGT				2q14.2b	Homo sapiens complement component 1, q subcomponent-like 2 (C1QL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	RefSeq	NM_014607.2	ILMN_26387	UBXN4	NM_014607.3	NM_014607.3		23190	116805346	NM_014607.3	UBXN4	NP_055422.1	ILMN_1781097	0001450537	S	3851	GGCTGTAAAATGAGAATTCTGCCCCCTCACCTCTTACCCCAGTACTATTC	2	+	136258940-136258989	2q21.3b	Homo sapiens UBX domain protein 4 (UBXN4), mRNA.				erasin; UBXDC1; FLJ23318; KIAA0242	UBXDC1; KIAA0242
Homo sapiens	RefSeq	NM_003168.1	ILMN_16133	SUPT4H1	NM_003168.1	NM_003168.1		6827	4507310	NM_003168.1	SUPT4H1	NP_003159.1	ILMN_1766245	0001770070	S	1161	GGCGACCATTGAGTCCTAGTCTCCCTTGTTTGTGCCCCTGTAGGAGGTAG	17	-	56422817-56422866	17q22d	Homo sapiens suppressor of Ty 4 homolog 1 (S. cerevisiae) (SUPT4H1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8649394] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9450929] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9857195] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 8649394] [evidence TAS]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9450929] [evidence IDA]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9857195] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 9450929] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8649394] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10075709] [evidence IPI]; Any activity that decreases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 8148] [pmid 9450929] [evidence IDA]; Any activity that decreases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 8148] [pmid 9857195] [evidence IDA]; Any activity that increases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 8159] [pmid 9450929] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9450929] [evidence IPI]	SPT4H; SUPT4H	SPT4H; SUPT4H
Homo sapiens	RefSeq	NR_002323.1	ILMN_21961	TUG1	NR_002323.1	NR_002323.1		55000	71040112	NR_002323.1	TUG1		ILMN_1682783	0005420427	S	6465	GTTTGTGCCCCTGGATCCAACCGTGCCTGAAGCTAGAATATCCCCTGGAC	22	+	29704741-29704790	22q12.2c	Homo sapiens taurine upregulated 1 (non-protein coding) (TUG1), non-coding RNA.				MGC46067; FLJ20618	MGC46067; FLJ20618
Homo sapiens	Unigene	Hs.581828	ILMN_134009	HS.581828	Hs.581828		Hs.581828		13729529	BG207842			ILMN_1903524	0007550221	S	3	GAGAGGCTGAAGATGGAAGAGGGCAGAGGATGGAGAAACAATTAAGGAGT	4	-	92252911-92252960		RST27329 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_942073.1	ILMN_31969	LOC652566	XM_942073.1	XM_942073.1		652566	89063089	XM_942073.1	LOC652566	XP_947166.1	ILMN_1702721	0003390717	S	52	GTCTCAGGGGAGCTGCCTCCTCCAGTGGGCCCTCCCTCTACTGATGAAAA					PREDICTED: Homo sapiens hypothetical protein LOC652566 (LOC652566), mRNA.					
Homo sapiens	RefSeq	NM_004134.4	ILMN_181774	HSPA9	NM_004134.4	NM_004134.4		3313	39812281	NM_004134.4	HSPA9	NP_004125.3	ILMN_1679209	0000430630	S	2575	TGTACATGGGGTCCTTCAACTGAGGCCTTGCAAGTCAAGCTGGCTGTGCC	5	-	137919148-137919197	5q31.2c	Homo sapiens heat shock 70kDa protein 9 (mortalin) (HSPA9), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7684501] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16130169] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 16130169] [evidence TAS]	MTHSP75; MGC4500; GRP75; mot-2; CSA; PBP74; MOT2; HSPA9B; MOT	MTHSP75; MGC4500; GRP75; mot-2; PBP74; MOT; CSA; MOT2; HSPA9
Homo sapiens	RefSeq	NM_032828.2	ILMN_15675	ZNF587	NM_032828.2	NM_032828.2		84914	112983657	NM_032828.2	ZNF587	NP_116217.1	ILMN_2078141	0001030064	S	2830	CTGCCTCAGCTTCTCAGGTGTGACCTACTGTGCTTGGCCTAATGTACAAC	19	+	58372472-58372521	19q13.43c	Homo sapiens zinc finger protein 587 (ZNF587), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20813; ZF6; FLJ14710	FLJ20813; ZF6; UBF-fl; FLJ14710
Homo sapiens	RefSeq	NM_144565.2	ILMN_28994	DUOXA1	NM_144565.2	NM_144565.2		90527	46485464	NM_144565.2	DUOXA1	NP_653166.2	ILMN_1710622	0002320347	S	1802	CTTTTGGAGCCTACCCCTTGTGTTACCTCCCGCCACACACCTCTAATCTG	15	-	45409713-45409762	15q21.1a	Homo sapiens dual oxidase maturation factor 1 (DUOXA1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		mol; NIP; FLJ32334; NUMBIP	mol; FLJ32334; NUMBIP; NIP
Homo sapiens	Unigene	Hs.527684	ILMN_100926	HS.527684	Hs.527684		Hs.527684		19760070	BQ024791			ILMN_1841002	0003370646	S	653	ACCACATTGCCGCACATTACGTCTCCACCGGAGCTGGTGTTTGGTACAAG	10	-	3366900-3366949		UI-1-BB1p-ats-d-05-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-ats-d-05-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_017891.2	ILMN_1200	C1ORF159	NM_017891.2	NM_017891.2		54991	40254912	NM_017891.2	C1orf159	NP_060361.2	ILMN_1672811	0005570523	S	2725	GCAGCCACCCATTTCCGGAGCTGCAGGATAGAGCTTCCTCTTGATCTCTG	1	-	1007507-1007556	1p36.33b	Homo sapiens chromosome 1 open reading frame 159 (C1orf159), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ20584; FLJ36119; FLJ21143; RP11-465B22.4	FLJ20584; FLJ36119; FLJ21143; RP11-465B22.4
Homo sapiens	RefSeq	NM_144711.3	ILMN_139105	KLHL23	NM_144711.3	NM_144711.3		151230	40255070	NM_144711.3	KLHL23	NP_653312.2	ILMN_1732550	0000460441	S	1395	CAATTCCGATATCAACGAATGGAGCCTCATCACCTCCAGTCCACATCCAG	2	+	170306244-170306293	2q31.1a	Homo sapiens kelch-like 23 (Drosophila) (KLHL23), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ37812; MGC22679; MGC2610	FLJ37812; MGC22679; MGC2610
Homo sapiens	RefSeq	NM_199002.1	ILMN_1413	ARHGEF1	NM_004706.3	NM_004706.3		9138	39777602	NM_004706.3	ARHGEF1	NP_004697.2	ILMN_1772370	0000870324	A	2749	CATGAAGCAGCTGGAGGAGTTGGAGGAGGAATTTTGCCGCCTGAGACCCC	19	+	42410757-42410772:42410855-42410888	19q13.2c	Homo sapiens Rho guanine nucleotide exchange factor (GEF) 1 (ARHGEF1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10747909] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11313914] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11313914] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10648409] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10747909] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8810315] [evidence TAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [pmid 8810315] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12681510] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	P115-RHOGEF; GEF1; LBCL2; SUB1.5	P115-RHOGEF; GEF1; LBCL2; SUB1.5
Homo sapiens	RefSeq	XM_001716751.1	ILMN_351727	LOC100129386	XM_001716751.1	XM_001716751.1		100129386	169203371	XM_001716751.1	LOC100129386	XP_001716803.1	ILMN_3272436	0006520762	M	433	TGCTGACCTGCAAAAGAATCAGGAGGGCTGGTGCTGGAGCAGATGGCGCA				11p15.4b	PREDICTED: Homo sapiens hypothetical protein LOC100129386 (LOC100129386), mRNA.					
Homo sapiens	Unigene	Hs.567186	ILMN_119376	HS.567186	Hs.567186		Hs.567186		4629203	AI620077			ILMN_1850366	0004250050	S	15	GTGTTTTATTACAGATAGTTTCCATTGCTGTGTTTTTAAGTTTGTTAATT					ty48b11.x1 NCI_CGAP_Ut2 Homo sapiens cDNA clone IMAGE:2282301 3, mRNA sequence					
Homo sapiens	RefSeq	XM_925825.1	ILMN_43423	LOC642276	XM_925825.1	XM_925825.1		642276	89028302	XM_925825.1	LOC642276	XP_930918.1	ILMN_1814909	0002260170	S	1198	GCAGACACTGCTGACATGTCCACCATCAAGTCTTCTCACTGTGGGGACAG	8	-	144224005-144224045:144224947-144224955	8q24.3f	PREDICTED: Homo sapiens similar to CG3950-PA (LOC642276), mRNA.					
Homo sapiens	RefSeq	XM_940518.1	ILMN_33209	LOC651373	XM_940518.1	XM_940518.1		651373	89058011	XM_940518.1	LOC651373	XP_945611.1	ILMN_1757718	0003830195	S	383	TAGAGCCCTGGAGGACACGGTTTGACCTCTGGAACAAGACGTGCTCAGGC					PREDICTED: Homo sapiens similar to cystatin 9-like precursor (LOC651373), mRNA.					
Homo sapiens	RefSeq	NM_172244.2	ILMN_9959	SGCD	NM_172244.2	NM_172244.2		6444	46249399	NM_172244.2	SGCD	NP_758447.1	ILMN_1702861	0002450327	A	1101	GTCCCCAACCCGGTCTCTAGTGATGGAGGCCCCAAAAGGAGTGGAAATCA	5	+	155754156-155754205	5q33.3a	Homo sapiens sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) (SGCD), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8842738] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [pmid 8841194] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8842738] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8841194] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SG-delta; SGCDP; CMD1L; MGC22567; 35DAG; SGD; DAGD	SG-delta; SGCDP; CMD1L; MGC22567; 35DAG; SGD; DAGD
Homo sapiens	RefSeq	NM_172244.2	ILMN_9959	SGCD	NM_172244.2	NM_172244.2		6444	46249399	NM_172244.2	SGCD	NP_758447.1	ILMN_1657254	0004490563	I	1248	GAGCTACAGCTTCAACAGGCCAACCCTTCCCATAACTGGTTGACCTCGGA	5	+	155771513-155771562	5q33.3a	Homo sapiens sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) (SGCD), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8842738] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [pmid 8841194] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8842738] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8841194] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SG-delta; SGCDP; CMD1L; MGC22567; 35DAG; SGD; DAGD	SG-delta; SGCDP; CMD1L; MGC22567; 35DAG; SGD; DAGD
Homo sapiens	RefSeq	XM_934915.1	ILMN_37088	LOC653722	XM_934915.1	XM_934915.1		653722	89025584	XM_934915.1	LOC653722	XP_940008.1	ILMN_1772938	0006370431	I	3	GAGATGGGTAAGGGCTGGCTGTTCCGGAAGATTCTGGCCTCTCCCAGTGT	7	-	149651689-149651736:149651737-149651738		PREDICTED: Homo sapiens similar to actin-related protein 3-beta, transcript variant 2 (LOC653722), mRNA.					
Homo sapiens	RefSeq	XR_042099.1	ILMN_334040	LOC728673	XR_042099.1	XR_042099.1		728673	169177390	XR_042099.1	LOC728673		ILMN_3234955	0006110059	S	5348	ATGTAATTAGTTAAGATGAGGTCATGCTGTAATAGGGTGGGCCCCCAATC	9	+	66299172-66299221	9q12g	PREDICTED: Homo sapiens misc_RNA (LOC728673), miscRNA.					
Homo sapiens	RefSeq	NM_024788.2	ILMN_43328	C7ORF63	NM_001039706.1	NM_001039706.1		79846	89274174	NM_001039706.1	C7orf63	NP_001034795.1	ILMN_1790315	0007160414	S	2810	GCTCTTAAAAAACTGCCCATTCGAGGAGGAGCCTTGCAGAGGGTGAAAGC	7	+	89777396-89777445	7q21.13b	Homo sapiens chromosome 7 open reading frame 63 (C7orf63), mRNA.					
Homo sapiens	RefSeq	NM_021035.1	ILMN_176843	ZNFX1	NM_021035.2	NM_021035.2		57169	124244057	NM_021035.2	ZNFX1	NP_066363.1	ILMN_1745148	0003800487	S	7022	GTTTGGTGGCACTGCTGGTTACCCCTGGGCCCTGAATGGAGCTAAAATCA	20	-	47862736-47862785	20q13.13c	Homo sapiens zinc finger, NFX1-type containing 1 (ZNFX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling serine to seryl-tRNA, catalyzed by seryl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6434] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the reaction: ATP + L-serine + tRNA(Ser) = AMP + diphosphate + L-seryl-tRNA(Ser) [goid 4828] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC131926; FLJ39275	
Homo sapiens	Unigene	Hs.560343	ILMN_114182	HS.560343	Hs.560343		Hs.560343		21732708	AL832164			ILMN_1862909	0006400564	S	1842	GCTTCCTGAGGGTAGAGATTGTATCTTTTTGCGTCTGCACAATGGCTAGC	15	-	58568447-58568496		Homo sapiens mRNA; cDNA DKFZp686M2414 (from clone DKFZp686M2414)					
Homo sapiens	RefSeq	NM_015575.3	ILMN_1349	GIGYF2	NM_015575.3	NM_015575.3		26058	156766041	NM_015575.3	GIGYF2	NP_056390.2	ILMN_3268924	0006130301	M	7628	CCTCCCAAGTAGCTGGGACTACAGCTATGTGCCAGTGCACCCAGCTTGTT	2	+	233433205-233433254	2q37.1c	Homo sapiens GRB10 interacting GYF protein 2 (GIGYF2), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16120600] [evidence IPI]	DKFZp686J17223; GYF2; TNRC15; PERQ3; DKFZp686I15154; KIAA0642; PERQ2; FLJ23368	GIGYF2; KIAA0642
Homo sapiens	RefSeq	XM_001717847.1	ILMN_345195	LOC100134360	XM_001717847.1	XM_001717847.1		100134360	169208825	XM_001717847.1	LOC100134360	XP_001717899.1	ILMN_3243817	0000010564	S	513	TACTCCGCTTGCGGTATGTACCCGCCGCTATTCAGCTTCCGGGCTAATTA					PREDICTED: Homo sapiens hypothetical LOC100134360 (LOC100134360), mRNA.					
Homo sapiens	RefSeq	NM_001014842.1	ILMN_1371	TM9SF1	NM_001014842.1	NM_001014842.1		10548	62460634	NM_001014842.1	TM9SF1	NP_001014842.1	ILMN_2333440	0006400411	A	1702	CGGGAGATTCCACCCCAGCCCTGGTACAAGTCTACTGTCATCCACATGAC	14	-	24659609-24659658	14q12a	Homo sapiens transmembrane 9 superfamily member 1 (TM9SF1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9332367] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HMP70; MP70	HMP70; MP70
Homo sapiens	RefSeq	NM_001014842.1	ILMN_1371	TM9SF1	NM_001014842.1	NM_001014842.1		10548	62460634	NM_001014842.1	TM9SF1	NP_001014842.1	ILMN_2253300	0006480747	I	1907	GGTTCCTCCTATCCCCAAGCAGGACTGAGCTTGAATGATATGAGAGTGTC	14	-	24659404-24659453	14q12a	Homo sapiens transmembrane 9 superfamily member 1 (TM9SF1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9332367] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HMP70; MP70	HMP70; MP70
Homo sapiens	RefSeq	NM_182701.1	ILMN_29481	GPX6	NM_182701.1	NM_182701.1		257202	33186886	NM_182701.1	GPX6	NP_874360.1	ILMN_1740990	0005820070	S	1411	CTTAGTGCATTCAGGTCATGGCACCTGGGCAGGGGTGTCCCTGTATTCTG	6	-	28579303-28579352	6p22.1b	Homo sapiens glutathione peroxidase 6 (olfactory) (GPX6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	RefSeq	XM_001722797.1	ILMN_347804	LOC100130276	XM_001722797.1	XM_001722797.1		100130276	169209797	XM_001722797.1	LOC100130276	XP_001722849.1	ILMN_3267800	0002510446	M	316	GGGCTGGATGTGGTGACTCACACCTGTAATCTCAGCACTTTGGGAGTCTG	16	+	11065852-11065901	16p13.13c	PREDICTED: Homo sapiens hypothetical protein LOC100130276 (LOC100130276), mRNA.					
Homo sapiens	RefSeq	NM_001077710.1	ILMN_175548	FAM110C	NM_001077710.1	NM_001077710.1		642273	118200351	NM_001077710.1	FAM110C	NP_001071178.1	ILMN_2090641	0006350176	S	870	CGCCCGCATCATCAAGTGGCTGTACACCTGTAAGAAGGCCAAGGAGACCC	2	-	45466-45515	2p25.3g	Homo sapiens family with sequence similarity 110, member C (FAM110C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]				
Homo sapiens	RefSeq	XR_041875.1	ILMN_348392	MARVELD1	XR_041875.1	XR_041875.1		83742	169188361	XR_041875.1	MARVELD1		ILMN_3227782	0006400538	A	3112	GCCAAAAGAGAGAGTGGGTTTGGGAAGAGTGAGGGTGGTTGGGGAGAGGG	10	+	99467774-99467823	10q24.2a	PREDICTED: Homo sapiens misc_RNA (MARVELD1), miscRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.126664	ILMN_76303	HS.126664	Hs.126664		Hs.126664		4852172	AI672441			ILMN_1894922	0005720431	S	386	GAGCTACCTGTGGGGAGGTGGAATGGGAATGAGGAACGGaaataaaatgg	1	-	100943864-100943913		wa03c03.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2296996 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001721328.1	ILMN_344567	LOC729402	XM_001721328.1	XM_001721328.1		729402	169201749	XM_001721328.1	LOC729402	XP_001721380.1	ILMN_3225938	0000580523	A	489	GTGAGAACCAATGGGAAGGAGCCTGAGCTGCTGGAACCTATTCCCTATGA				10q26.12a	PREDICTED: Homo sapiens hypothetical LOC729402 (LOC729402), mRNA.					
Homo sapiens	RefSeq	XM_042978.5	ILMN_164529	FRMPD3	XM_042978.6	XM_042978.6		84443	113430011	XM_042978.6	FRMPD3	XP_042978.5	ILMN_1753507	0001710288	A	7105	CTTTTTCTCCCAACTTCGCCACTCAGCCCCTGCCTGTGTCATTCCACCGC	X	+	106734931-106734980	Xq22.3b	PREDICTED: Homo sapiens FERM and PDZ domain containing 3 (FRMPD3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	Unigene	Hs.131128	ILMN_77099	HS.131128	Hs.131128		Hs.131128		11450504	BF437987			ILMN_1872967	0000270484	S	415	GGCCAAACCAGAACCCTAAATCCAGCAGCAAAAAATTCCACCTATGCACG	6	+	136157457-136157464:136157494-136157520		7q63f08.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3703070 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001724500.1	ILMN_343861	LOC100130506	XM_001724500.1	XM_001724500.1		100130506	169163998	XM_001724500.1	LOC100130506	XP_001724552.1	ILMN_3263225	0006110441	M	460	GTGCTTTAAACGGTCTTGGTGCTGTGTTACGGGAGAGAGTGACTGGAAAG					PREDICTED: Homo sapiens hypothetical protein LOC100130506 (LOC100130506), mRNA.					
Homo sapiens	RefSeq	NM_032298.1	ILMN_23444	SYT3	NM_032298.1	NM_032298.1		84258	14150053	NM_032298.1	SYT3	NP_115674.1	ILMN_1724774	0002570017	S	2597	TGGGGGTCATTCAGCCTCCACTGTGTCTGTCTTTTCTTCCCTGGGGCTCC	19	-	55817314-55817363	19q13.33c	Homo sapiens synaptotagmin III (SYT3), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 11256614] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp761O132; SytIII	DKFZp761O132; SytIII
Homo sapiens	RefSeq	NM_213662.1	ILMN_29673	STAT3	NM_213662.1	NM_213662.1		6774	47458819	NM_213662.1	STAT3	NP_998827.1	ILMN_1663618	0004250538	A	4254	ACAGGGTTCGCCCCAGTCCTCCTGCCTGGAGACAGTTGATGTGTCATGCA	17	-	40465854-40465903	17q21.2b	Homo sapiens signal transducer and activator of transcription 3 (acute-phase response factor) (STAT3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12444102] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7512451] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8675499] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9670957] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10205054] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7512451] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 15664994] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10205054] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15664994] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7512451] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8675499] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5062] [pmid 7512451] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15664994] [evidence IPI]	APRF; FLJ20882; MGC16063	APRF; FLJ20882; MGC16063
Homo sapiens	RefSeq	NM_213662.1	ILMN_29673	STAT3	NM_213662.1	NM_213662.1		6774	47458819	NM_213662.1	STAT3	NP_998827.1	ILMN_2401978	0005090619	A	4418	GGGCGAGGGTTCAGGGCTTCTCTGGAGCAGATATTGTCAAGTTCATGGCC	17	-	40465690-40465739	17q21.2b	Homo sapiens signal transducer and activator of transcription 3 (acute-phase response factor) (STAT3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12444102] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7512451] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8675499] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9670957] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10205054] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7512451] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 15664994] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10205054] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15664994] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7512451] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8675499] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5062] [pmid 7512451] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15664994] [evidence IPI]	APRF; FLJ20882; MGC16063	APRF; FLJ20882; MGC16063
Homo sapiens	RefSeq	XM_928579.1	ILMN_34130	LOC645563	XM_928579.1	XM_928579.1		645563	89041672	XM_928579.1	LOC645563	XP_933672.1	ILMN_1724197	0006650445	S	147	CAAAAACCCCAGCAAAGCTTCGGAGCAGTTCTCTGGGGCCTTTCACAGCG	17	-	54764925-54764974		PREDICTED: Homo sapiens hypothetical protein LOC645563 (LOC645563), mRNA.					
Homo sapiens	RefSeq	XM_001715712.1	ILMN_337489	LOC100129410	XM_001715712.1	XM_001715712.1		100129410	169166784	XM_001715712.1	LOC100129410	XP_001715764.1	ILMN_3179396	0002850093	A	102	AGTGACCGAAGTAGTAGTCTGGTGTGTGGGTGCAGCTGAAGTTTCAGAAG				4q13.3a	PREDICTED: Homo sapiens hypothetical protein LOC100129410 (LOC100129410), mRNA.					
Homo sapiens	RefSeq	NM_032960.2	ILMN_1236	MAPKAPK2	NM_032960.2	NM_032960.2		9261	32481208	NM_032960.2	MAPKAPK2	NP_116584.2	ILMN_1774844	0004260661	A	2717	ATCAGCCATTTGCCATCACCCCAAACAACTCAGCTTCGGGGCCGGTGAGG	1	+	204973914-204973963	1q32.1h	Homo sapiens mitogen-activated protein kinase-activated protein kinase 2 (MAPKAPK2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8280084] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8846784] [evidence EXP]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 8179591] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8179591] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9297626] [evidence EXP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8280084] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8179591] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16278218] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17255097] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17292828] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_033082.1	ILMN_23177	CIP29	NM_033082.2	NM_033082.2		84324	141801985	NM_033082.2	CIP29	NP_149073.1	ILMN_1680967	0004760523	S	723	TGCCTAAATGCACAGTCATGTGCCTACGTCCTGCCTCGCAATGAGGGAGC	12	-	54437444-54437493	12q13.2b	Homo sapiens cytokine induced protein 29 kDa (CIP29), mRNA.				MGC14726; HCC1; HSPC316; HCC-1	MGC14726; HCC1; HSPC316; HCC-1
Homo sapiens	RefSeq	NM_182529.1	ILMN_2413	THAP5	NM_182529.1	NM_182529.1		168451	32698887	NM_182529.1	THAP5	NP_872335.1	ILMN_2189915	0000460592	S	1355	GTCTTTGGAAGCTCTTATAAGGCAGCTAAAGCAGGAAAACTGGCTATCTG	7	-	107991929-107991978	7q31.1a	Homo sapiens THAP domain containing 5 (THAP5), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp313O1132	DKFZp313O1132
Homo sapiens	RefSeq	NM_182529.1	ILMN_2413	THAP5	NM_182529.1	NM_182529.1		168451	32698887	NM_182529.1	THAP5	NP_872335.1	ILMN_1769150	0001070102	S	1144	CTGCACAAAAAGAAACCACGGAAATGGAAGACACAGACATTGAAGACTCC	7	-	107992140-107992189	7q31.1a	Homo sapiens THAP domain containing 5 (THAP5), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp313O1132	DKFZp313O1132
Homo sapiens	Unigene	Hs.579025	ILMN_131206	HS.579025	Hs.579025		Hs.579025		12068202	BF741526			ILMN_1862853	0002710468	S	279	CTGGCACGTCTCCCAGAAACATCAACGAAGCACGAGGCAGGAAGAGGACG	17	-	77938722-77938771		MR1-HB0017-151200-003-h03 HB0017 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_001009608.1	ILMN_24801	C20ORF94	NM_001009608.1	NM_001009608.1		128710	61102722	NM_001009608.1	C20orf94	NP_001009608.1	ILMN_1715625	0002690431	S	1277	CCTCCAGACATCTTATGAAAAATAACCCAGGGCAGGCACAGCAAACCGGC	20	+	10551479-10551528	20p12.2b-p12.2a	Homo sapiens chromosome 20 open reading frame 94 (C20orf94), mRNA.				dJ1099D15.3; bA204H22.1; bA254M13.1	bA204H22.1; dJ1099D15.3; bA254M13.1
Homo sapiens	RefSeq	NM_153835.1	ILMN_1282	GPR113	NM_153835.3	NM_153835.3		165082	148230774	NM_153835.3	GPR113	NP_722577.2	ILMN_1762897	0003830097	S	2877	AGCGCCAAGCTCTGCTGGGGGTGATCAAAGCCCTGCTCATTCTTACACCC	2	-	26533655-26533704	2p23.3b	Homo sapiens G protein-coupled receptor 113 (GPR113), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	FLJ16767; hGPCR37; PGR23	FLJ16767; hGPCR37; PGR23
Homo sapiens	RefSeq	XM_936869.1	ILMN_25856	ACSM2A	NM_001010845.2	NM_001010845.2		123876	154689753	NM_001010845.2	ACSM2A	NP_001010845.1	ILMN_1809623	0006550452	I	2603	CTGGAGCTTGAGAAGGAAATGAAAGGCCGTGGCACCTTCTTATACCCTAG	16	+	20406131-20406180	16p12.3a	Homo sapiens acyl-CoA synthetase medium-chain family member 2A (ACSM2A), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	MGC150530; ACSM2; A-923A4.1	
Homo sapiens	RefSeq	NM_032165.2	ILMN_173993	LRRIQ1	NM_032165.3	NM_032165.3		84125	120953242	NM_032165.3	LRRIQ1	NP_115541.3	ILMN_1655955	0001940543	S	3839	CTCTGCAAAATGGAGTCTTCTACTCTTGTGCACGTGAAGGTGAGCCAGAC	12	+	84042149-84042198	12q21.31e	Homo sapiens leucine-rich repeats and IQ motif containing 1 (LRRIQ1), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ12303	FLJ12303
Homo sapiens	RefSeq	NM_005499.2	ILMN_11668	UBA2	NM_005499.2	NM_005499.2		10054	50592990	NM_005499.2	UBA2	NP_005490.1	ILMN_1742872	0004290632	S	1732	GGGGCCCAAACAAGCTGAAGATGCTGCCAAAAGCATAACCAATGGCAGTG	19	+	34957840-34957889	19q13.11c	Homo sapiens ubiquitin-like modifier activating enzyme 2 (UBA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [pmid 10187858] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBA2; SAE2; HRIHFB2115; ARX; FLJ13058	UBA2; SAE2; HRIHFB2115; ARX; FLJ13058
Homo sapiens	RefSeq	XM_944440.1	ILMN_32266	LOC650965	XM_944440.1	XM_944440.1		650965	89035205	XM_944440.1	LOC650965	XP_949533.1	ILMN_1680360	0001660338	S	1	ATGACGAGGAGAGGGTCCTGCCCAGAGCGTGCCCCCCTCCGTCACTTGGT					PREDICTED: Homo sapiens hypothetical LOC650965 (LOC650965), mRNA.					
Homo sapiens	RefSeq	NM_001012446.1	ILMN_7037	C9ORF128	NM_001012446.1	NM_001012446.1		392307	60218888	NM_001012446.1	C9orf128	NP_001012448.1	ILMN_1683232	0005220414	S	1593	CACGAGACTTTCTTTGACACCCAGAAGACCCGGCAACGAGGAGGAAGGCC	9	-	35808891-35808940	9p13.3a	Homo sapiens chromosome 9 open reading frame 128 (C9orf128), mRNA.					
Homo sapiens	RefSeq	XM_001717833.1	ILMN_342450	LOC100129334	XM_001717833.1	XM_001717833.1		100129334	169210659	XM_001717833.1	LOC100129334	XP_001717885.1	ILMN_3261601	0006020367	M	230	GCATGCCTTGGCTCGTGGCCCCTTCTTCCATCTTCAAAGCCAGCATTGCC				16p13.3a	PREDICTED: Homo sapiens hypothetical protein LOC100129334 (LOC100129334), mRNA.					
Homo sapiens	RefSeq	NM_080430.2	ILMN_1005	SELM	NM_080430.2	NM_080430.2		140606	46370092	NM_080430.2	SELM	NP_536355.1	ILMN_1651429	0006400148	S	572	GAATACTTCTCTTGCTGAGAGCCGATGCCCGTCCCCGGGCCAGCAGGGAT	22	-	31500832-31500881	22q12.2c	Homo sapiens selenoprotein M (SELM), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	MGC40146; SEPM	MGC40146; SEPM
Homo sapiens	RefSeq	XM_001717229.1	ILMN_348238	LOC100129335	XM_001717229.1	XM_001717229.1		100129335	169172192	XM_001717229.1	LOC100129335	XP_001717281.1	ILMN_3191902	0006960360	A	217	CGCCTACGGAGGGCATCCGAAACTGCCCTACAGAGCAGTCGCCGGGCAGT				7p21.1c	PREDICTED: Homo sapiens hypothetical protein LOC100129335 (LOC100129335), mRNA.					
Homo sapiens	RefSeq	NM_002198.1	ILMN_11739	IRF1	NM_002198.1	NM_002198.1		3659	4504720	NM_002198.1	IRF1	NP_002189.1	ILMN_1708375	0006250064	S	1893	CCTCAACAGGCCCAGGGAGGGAAGTGTGAGCGCCTTGGTATGACTTAAAA	5	-	131846773-131846822	5q31.1b	Homo sapiens interferon regulatory factor 1 (IRF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	IRF-1; MAR	IRF-1; MAR
Homo sapiens	RefSeq	NM_181862.2	ILMN_4130	ACOT7	NM_181862.2	NM_181862.2		11332	75709209	NM_181862.2	ACOT7	NP_863652.2	ILMN_1728883	0003460681	I	1237	GGGGTGCGTCTTGTGACTGCGGGCGCTTTGCATGGGACTCTGTACCTTAC	1	-	6265445-6265494	1p36.31a	Homo sapiens acyl-CoA thioesterase 7 (ACOT7), transcript variant hBACHa/X, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10578051] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10578051] [evidence TAS]	Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [pmid 10578051] [evidence TAS]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	hBACH; LACH1; RP1-120G22.10; BACH; ACH1; MGC1126; ACT; CTE-II	hBACH; LACH1; RP1-120G22.10; MGC1126; BACH; ACH1; ACT; CTE-II
Homo sapiens	RefSeq	NM_199280.1	ILMN_2089	LOC165186	NM_199280.1	NM_199280.1		165186	40548323	NM_199280.1	LOC165186	NP_954974.1	ILMN_1775062	0002600095	S	2417	GGGCTGGCTGCAGGTGAGCTGGGGGAGAACAGGGTATGTAAGTAAGATGG	2	+	29123567-29123616	2p23.2a	Homo sapiens similar to RIKEN cDNA 4632412N22 gene (LOC165186), mRNA.					
Homo sapiens	RefSeq	NM_152415.1	ILMN_12702	VPS37A	NM_152415.1	NM_152415.1		137492	22748878	NM_152415.1	VPS37A	NP_689628.1	ILMN_1711139	0002850747	S	1401	GAAGAGCCAAGGAAGAGAAACTTCAGCAGGCGATAGCAATGCACAGCCAA	8	+	17188240-17188289	8p22b	Homo sapiens vacuolar protein sorting 37 homolog A (S. cerevisiae) (VPS37A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		HCRP1; FLJ32642; FLJ42616	HCRP1; FLJ32642; FLJ42616
Homo sapiens	RefSeq	NM_152415.1	ILMN_12702	VPS37A	NM_152415.1	NM_152415.1		137492	22748878	NM_152415.1	VPS37A	NP_689628.1	ILMN_2161832	0001090221	S	1948	AGATATTCATAGTGTTAGGAAACACCAAACCTGCCTATGTGCCATCTCAC	8	+	17197346-17197395	8p22b	Homo sapiens vacuolar protein sorting 37 homolog A (S. cerevisiae) (VPS37A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		HCRP1; FLJ32642; FLJ42616	HCRP1; FLJ32642; FLJ42616
Homo sapiens	RefSeq	NM_001001912.1	ILMN_10690	OR4E2	NM_001001912.1	NM_001001912.1		26686	50054441	NM_001001912.1	OR4E2	NP_001001912.1	ILMN_1702807	0002000414	S	702	GAAAGCCCTGTCTACCTGCTCGGCCCACTTCATGGTGGTTGCCCTCTTCT	14	+	21203838-21203887	14q11.2d	Homo sapiens olfactory receptor, family 4, subfamily E, member 2 (OR4E2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR14-42	OR14-42
Homo sapiens	RefSeq	NM_024589.1	ILMN_15661	ROGDI	NM_024589.1	NM_024589.1		79641	13375778	NM_024589.1	ROGDI	NP_078865.1	ILMN_1722738	0002510689	S	1183	GGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAA	16	-	4847194-4847243	16p13.3b	Homo sapiens rogdi homolog (Drosophila) (ROGDI), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]			FLJ22386	FLJ22386
Homo sapiens	RefSeq	XM_001715026.1	ILMN_334110	LOC286002	XM_001715026.1	XM_001715026.1		286002	169171935	XM_001715026.1	LOC286002	XP_001715078.1	ILMN_3274543	0001980373	M	3340	TTTGAGAAGCTGAGGCGGGAGGATCACTTGAGCCAGGCCTAATCCTGAGC				7q22.3c	PREDICTED: Homo sapiens hypothetical protein LOC286002 (LOC286002), mRNA.					
Homo sapiens	RefSeq	NM_004403.1	ILMN_7276	DFNA5	NM_004403.2	NM_004403.2		1687	116734721	NM_004403.2	DFNA5	NP_004394.1	ILMN_1670145	0000580403	S	2356	ACACACCCCTGCTTGGGACCCTAGCTATATGCATTTTATGTGACCTTGCC	7	-	24738800-24738849	7p15.3a	Homo sapiens deafness, autosomal dominant 5 (DFNA5), transcript variant 1, mRNA.		The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9771715] [evidence TAS]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IEA]		ICERE-1	ICERE-1
Homo sapiens	RefSeq	XR_016962.1	ILMN_167624	LOC653590	XR_016962.1	XR_016962.1		653590	113429364	XR_016962.1	LOC653590		ILMN_3235392	0005910255	S	1	ATGCCTGCCCCCAACACCACTGGGGGCATTGTGACAGCTGAGGACCTGAA	22	+	18940376-18940397:18940469-18940496	22q11.21d	PREDICTED: Homo sapiens misc_RNA (LOC653590), miscRNA.					
Homo sapiens	RefSeq	XR_016578.2	ILMN_163070	LOC400352	XR_016578.2	XR_016578.2		400352	169208155	XR_016578.2	LOC400352		ILMN_3218223	0004560504	A	132	GGTGCGAAACAAAGGACACGGGAAACCAAGAGAAAAGTCCATAGCAGACG	15	-	30579326-30579375	15q13.3c	PREDICTED: Homo sapiens hypothetical LOC400352 (LOC400352), mRNA.					
Homo sapiens	RefSeq	XR_038053.1	ILMN_333967	LOC100133312	XR_038053.1	XR_038053.1		100133312	169184181	XR_038053.1	LOC100133312		ILMN_3274380	0000520156	M	878	GAGCCTCAGAGCCTTGACACCCAAGCACTGCCACGGAAGTCTCCCCCTTT				9p11.2a	PREDICTED: Homo sapiens misc_RNA (LOC100133312), miscRNA.					
Homo sapiens	RefSeq	XM_937090.1	ILMN_30722	LOC648040	XM_937090.1	XM_937090.1		648040	89031902	XM_937090.1	LOC648040	XP_942183.1	ILMN_1749175	0001230528	S	441	GCAAAAGTGGACTAGTCAAGAACAAAGGGAGGACACAGAGCTGCGCCGCC					PREDICTED: Homo sapiens similar to Rap1 GTPase-GDP dissociation stimulator 1 (SMG P21 stimulatory GDP/GTP exchange protein) (SMG GDS protein) (Exchange factor smgGDS) (LOC648040), mRNA.					
Homo sapiens	RefSeq	XM_370910.4	ILMN_178509	LOC388181	XR_016790.1	XR_016790.1		388181	113425429	XR_016790.1	LOC388181		ILMN_1755506	0003120255	A	1222	CAGTGCAGTCCACCAAGAGACGCAATCCATCGCCACGAACCCTTCATCCG	15	+	95102454-95102503	15q26.2c	PREDICTED: Homo sapiens hypothetical LOC388181 (LOC388181), mRNA.					
Homo sapiens	RefSeq	NM_002892.2	ILMN_28998	ARID4A	NM_023001.2	NM_023001.2		5926	115334678	NM_023001.2	ARID4A	NP_075377.2	ILMN_1810229	0007160440	A	4318	GCCAAAGTATATGTTCAGCAGTGTGCCCAGGATTGAAGGTGTAAATGGGA	14	+	57908957-57909006	14q23.1b	Homo sapiens AT rich interactive domain 4A (RBP1-like) (ARID4A), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8414517] [evidence TAS]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8414517] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8414517] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1857421] [evidence TAS]	RBP1; RBP-1; RBBP1	RBP1; RBP-1; RBBP1
Homo sapiens	RefSeq	NM_012252.2	ILMN_15501	TFEC	NM_001018058.1	NM_001018058.1		22797	64762401	NM_001018058.1	TFEC	NP_001018068.1	ILMN_1711332	0001070356	A	3914	CAGGTCTCTTAGGTGTGCGGTTAATGTCATGTATAACAATGGGGGGACCC	7	-	115577782-115577831	7q31.2b	Homo sapiens transcription factor EC (TFEC), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9256061] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9256061] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9256061] [evidence TAS]	TCFEC; TFECL	TCFEC; TFECL
Homo sapiens	RefSeq	XM_938491.1	ILMN_308516	ZNF492	NM_020855.1	NM_020855.1		57615	148806864	NM_020855.1	ZNF492	NP_065906.1	ILMN_1662659	0002190187	S	2291	AAAAAATATTTAATTCAATGGTAAGTTTATGTAAATATCAGAGAATTTAT	19	+	22640471-22640520	19p12c	Homo sapiens zinc finger protein 492 (ZNF492), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129633; MGC148019; KIAA1473	
Homo sapiens	RefSeq	NM_019901.1	ILMN_11956	ABCC1	NM_019901.1	NM_019901.1		4363	9955957	NM_019901.1	ABCC1	NP_063956.1	ILMN_2335302	0000580707	A	4851	GTGAAGACCCAGGAGAGACAGAGATGCGAACCACCCAAAACACGCACACC	16	+	16142845-16142894	16p13.11a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 6, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 1360704] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1360704] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 1360704] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 1360704] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 1360704] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 1360704] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 15999530] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 1360704] [evidence TAS]	GS-X; ABCC; MRP1; ABC29; DKFZp781G125; MRP; DKFZp686N04233	ABC29; GS-X; ABCC; MRP1; DKFZp781G125; MRP; DKFZp686N04233
Homo sapiens	RefSeq	NM_001004755.1	ILMN_21012	OR51L1	NM_001004755.1	NM_001004755.1		119682	52317143	NM_001004755.1	OR51L1	NP_001004755.1	ILMN_1697758	0006180437	S	514	CATGGCAATGCCCTCTCTCACGCCTTCTGTTTGCACCAGGATGTTCTAAG	11	+	4977302-4977351	11p15.4c	Homo sapiens olfactory receptor, family 51, subfamily L, member 1 (OR51L1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-31	OR11-31
Homo sapiens	RefSeq	NM_001004321.1	ILMN_166018	LOC441124	XM_499022.3	XM_499022.3		441124	113411694	XM_499022.3	LOC441124	XP_499022.2	ILMN_1682912	0004060014	S	865	GTCGACCTCACCAGGCCCAGCTCATGCTTCTTTGCAGCCTCTCCAGGCCC	1	-	222206332-222206381	1q42.11a	PREDICTED: Homo sapiens hypothetical LOC441124 (LOC441124), mRNA.					
Homo sapiens	RefSeq	XM_499022.2	ILMN_166018	LOC441124	XM_499022.3	XM_499022.3		441124	113411694	XM_499022.3	LOC441124	XP_499022.2	ILMN_1778111	0002850437	S	1878	CAAGGCCCTCTTCACACTCCATCTTGTAGCCCCAGCAGGAGCTATTTTCT	1	-	222205319-222205368	1q42.11a	PREDICTED: Homo sapiens hypothetical LOC441124 (LOC441124), mRNA.					
Homo sapiens	RefSeq	XM_372002.3	ILMN_165271	LOC389599	XM_001131588.1	XM_001131588.1		389599	113419875	XM_001131588.1	LOC389599	XP_001131588.1	ILMN_1714765	0001770133	S	934	CCATCAATATCACTGCCTCCGGTGTTACCTTGGACTGAGCCAGAATGTGG				7q36.1c	PREDICTED: Homo sapiens similar to amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 2 (LOC389599), mRNA.					
Homo sapiens	Unigene	Hs.288735	ILMN_84906	HS.288735	Hs.288735		Hs.288735		10435561	AK023584			ILMN_1854349	0007610296	S	1660	GGGGTAACCACTGTTAATGGTTTGGTATGTGTCCTTCCAGACACTTTCTA	6	+	125448572-125448621		Homo sapiens cDNA FLJ13522 fis, clone PLACE1005884					
Homo sapiens	RefSeq	XM_001719962.1	ILMN_349349	LOC100127910	XM_001719962.1	XM_001719962.1		100127910	169161889	XM_001719962.1	LOC100127910	XP_001720014.1	ILMN_3269572	0006370400	M	1	ATGAGAATGGGAGGGCCTGACGAGTCTTATGGTAGCAAGCGTCCAGGGGA				1q24.2c	PREDICTED: Homo sapiens hypothetical protein LOC100127910 (LOC100127910), mRNA.					
Homo sapiens	RefSeq	NM_001176.2	ILMN_176091	ARHGDIG	NM_001176.2	NM_001176.2		398	83313660	NM_001176.2	ARHGDIG	NP_001167.2	ILMN_2049274	0004180377	S	483	CTTCAAGGTCCACAGGGAGATTGTCAGCGGCCTCAAGTGTCTGCACCACA	16	+	272368-272374:272468-272510	16p13.3f	Homo sapiens Rho GDP dissociation inhibitor (GDI) gamma (ARHGDIG), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 9113980] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 9113980] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 9113980] [evidence TAS]	Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [pmid 9113980] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]	RHOGDI-3	RHOGDI-3
Homo sapiens	RefSeq	NM_138341.1	ILMN_23612	TMEM116	NM_138341.1	NM_138341.1		89894	24308397	NM_138341.1	TMEM116	NP_612350.1	ILMN_2052871	0002070736	S	1330	GCAGGGGCTTAAATTCACTGGAATCCACCCTGACTTTTCCTGCCAGTACT	12	-	112369439-112369488	12q24.13a	Homo sapiens transmembrane protein 116 (TMEM116), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ90167	FLJ90167
Homo sapiens	Unigene	Hs.120187	ILMN_75615	HS.120187	Hs.120187		Hs.120187		27828171	BX096254			ILMN_1898662	0003940228	S	215	CAGGAAAAGGGATTATATAGGGGACATCCAGGAGGCCTCAGAGCACAGGT	3	+	47189100-47189149		BX096254 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGp998H065280, mRNA sequence					
Homo sapiens	RefSeq	XM_936851.1	ILMN_33201	LOC647786	XM_936851.2	XM_936851.2		647786	113426342	XM_936851.2	LOC647786	XP_941944.2	ILMN_1701636	0003710575	S	2766	AGAAAGTGGACAGAGAAGACCCCAAGGGCATGCCTTCTGATCCCTGAGAG					PREDICTED: Homo sapiens similar to kidney-specific protein (KS) (LOC647786), mRNA.					
Homo sapiens	RefSeq	XM_059832.8	ILMN_309141	C7ORF57	NM_001100159.1	NM_001100159.1		136288	154091006	NM_001100159.1	C7orf57	NP_001093629.1	ILMN_1790211	0003400722	A	1385	CACTTGCTCCTCCTATTGTGTGAACCACTCTTAGCAGGCATTGCTACTGG	7	+	48066679-48066728	7p12.3b	Homo sapiens chromosome 7 open reading frame 57 (C7orf57), mRNA.					
Homo sapiens	RefSeq	NM_030957.2	ILMN_25432	ADAMTS10	NM_030957.2	NM_030957.2		81794	56121814	NM_030957.2	ADAMTS10	NP_112219.2	ILMN_1751168	0000840370	S	3917	TCGGAATATGTACTGTGAAGAGTAGGGGTGGGGAGGTGGTCTGCCGGTGC	19	-	8645396-8645445	19p13.2d	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 10 (ADAMTS10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	WMS; ADAM-TS10	WMS; ADAM-TS10
Homo sapiens	RefSeq	NM_002954.3	ILMN_12818	RPS27A	NM_002954.3	NM_002954.3		6233	27436941	NM_002954.3	RPS27A	NP_002945.1	ILMN_1755883	0003780528	S	19	GCGGTGGAGCCGCCACCAAAATGCAGATTTTCGTGAAAACCCTTACGGGG	2	+	55313346-55313348:55313448-55313464:55313465-55313494	2p16.1d	Homo sapiens ribosomal protein S27a (RPS27A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14528304] [evidence IC ]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11231585] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9660940] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16407834] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15469984] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12593796] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10995389] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11931757] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12218189] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12820959] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15781449] [evidence EXP]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 12367500] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 12367500] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 14528304] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 11597332] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that results in an increase in the efficacy of transmission at a neuromuscular synapse [goid 42062] [pmid 12367500] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 14528304] [evidence IDA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [pmid 12367500] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14528304] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [pmid 14528304] [evidence IDA]	UBCEP1; UBA80; CEP80; HUBCEP80; UBCEP80	UBA80; CEP80; UBCEP80; UBCEP1; HUBCEP80
Homo sapiens	RefSeq	NM_002954.3	ILMN_12818	RPS27A	NM_002954.3	NM_002954.3		6233	27436941	NM_002954.3	RPS27A	NP_002945.1	ILMN_2048326	0002320139	S	393	CGAGAGTGCCCTTCTGATGAATGTGGTGCTGGGGTGTTTATGGCAAGTCA	2	+	55316101-55316150	2p16.1d	Homo sapiens ribosomal protein S27a (RPS27A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14528304] [evidence IC ]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11231585] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9660940] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16407834] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15469984] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12593796] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10995389] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11931757] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12218189] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12820959] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15781449] [evidence EXP]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 12367500] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 12367500] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 14528304] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 11597332] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that results in an increase in the efficacy of transmission at a neuromuscular synapse [goid 42062] [pmid 12367500] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 14528304] [evidence IDA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [pmid 12367500] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14528304] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [pmid 14528304] [evidence IDA]	UBCEP1; UBA80; CEP80; HUBCEP80; UBCEP80	UBA80; CEP80; UBCEP80; UBCEP1; HUBCEP80
Homo sapiens	RefSeq	NM_001018001.1	ILMN_13879	KIAA1026	NM_001018001.1	NM_001018001.1		23254	65301127	NM_001018001.1	KIAA1026	NP_001018001.1	ILMN_1658187	0001400382	I	192	GTGCTGCAGTGGCACCCAGTTTGGAGGAAATTCGGAACCAGAAGAGTGTG	1	+	15129074-15129123	1p36.21b-p36.21a	Homo sapiens kazrin (KIAA1026), transcript variant N, mRNA.				RP1-21O18.1	RP1-21O18.1
Homo sapiens	RefSeq	NM_178823.2	ILMN_178707	C6ORF165	NM_178823.2	NM_178823.2		154313	31343459	NM_178823.2	C6orf165	NP_849145.1	ILMN_1707780	0002850487	I	2395	CCCGGGCTGGTCTCAAACTTGTGGCTTCAAGTTATCCTCCCGCCTTGGCA	6	+	88145590-88145639	6q15a	Homo sapiens chromosome 6 open reading frame 165 (C6orf165), transcript variant 2, mRNA.				FLJ25974; dJ382I10.1	FLJ25974; dJ382I10.1
Homo sapiens	RefSeq	XM_936580.1	ILMN_33324	LOC647521	XM_936580.1	XM_936580.1		647521	89028475	XM_936580.1	LOC647521	XP_941673.1	ILMN_1700556	0000990519	S	78	TGGGCTGGATGAGGGAAGCTGTGGCCTGAGTGCCAACGGAAGCAGGCACC					PREDICTED: Homo sapiens similar to W03G1.5 (LOC647521), mRNA.					
Homo sapiens	RefSeq	NM_005327.1	ILMN_13258	HADH	NM_005327.2	NM_005327.2		3033	94557307	NM_005327.2	HADH	NP_005318.2	ILMN_1719906	0006290709	S	1646	GCTGCTGAATGGGTCAGCATATCTCTGTTTGCATGGTTTGCAGGAGGTCG	4	+	108956065-108956114	4q25b	Homo sapiens hydroxyacyl-Coenzyme A dehydrogenase (HADH), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8687463] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8687463] [evidence EXP]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+ [goid 3857] [pmid 8687463] [evidence EXP]; Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+ [goid 3857] [pmid 8687463] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	HHF4; HADH1; MGC8392; HADHSC; M/SCHAD; HAD; SCHAD	SCHAD
Homo sapiens	RefSeq	NM_020548.4	ILMN_30320	DBI	NM_020548.4	NM_020548.4		1622	54262129	NM_020548.4	DBI	NP_065438.1	ILMN_1755926	0002480338	S	205	CACTGGGACAGAGGCTGAGTTTGAGAAAGCTGCAGAGGAGGTTAGGCACC	2	+	119841678-119841690:119842234-119842270	2q14.2b	Homo sapiens diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein) (DBI), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with the peripheral benzodiazepine receptor (PBR) [goid 30156] [pmid 3020548] [evidence TAS]	MGC70414; ACBD1; ACBP	MGC70414; ACBD1; ACBP
Homo sapiens	RefSeq	NM_152591.1	ILMN_26683	CCDC63	NM_152591.1	NM_152591.1		160762	22749216	NM_152591.1	CCDC63	NP_689804.1	ILMN_1773060	0007050128	S	1657	TCTGCCCTCCTCAAGCCCCCAGAACCCATCAAAGTCATCCCCCCAGTTCT	12	+	109826894-109826943	12q24.11d	Homo sapiens coiled-coil domain containing 63 (CCDC63), mRNA.				FLJ35843	FLJ35843
Homo sapiens	Unigene	Hs.313056	ILMN_85894	HS.313056	Hs.313056		Hs.313056		19591658	BM974067			ILMN_1860789	0004850634	S	475	CAGTGTTGGTGGCCGCAGGATGTGAAGGTGGTCAGAGAACTTGAGGAGGG	2	-	116319273-116319322		UI-CF-EC1-abz-d-11-0-UI.s1 UI-CF-EC1 Homo sapiens cDNA clone UI-CF-EC1-abz-d-11-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_053005.2	ILMN_29092	HCCA2	NM_053005.3	NM_053005.3		81532	144446223	NM_053005.3	HCCA2	NP_443731.2	ILMN_1706273	0002640706	S	1304	CTTCCTGCTGCCTCCTCCATGCCCAAGGAACACCCATGGTGCAGTCCTCA	11	-	1490745-1490794	11p15.5b	Homo sapiens HCCA2 protein (HCCA2), mRNA.				MOB2	MOB2
Homo sapiens	RefSeq	NM_176811.2	ILMN_921	NLRP8	NM_176811.2	NM_176811.2		126205	33667039	NM_176811.2	NLRP8	NP_789781.2	ILMN_1755027	0007210494	S	3345	ACCACAGAACCTCAGCTTTGAACCCTGGAGTGAGGACGGTGATGCCCTGT	19	+	56499406-56499455	19q13.42c	Homo sapiens NLR family, pyrin domain containing 8 (NLRP8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	CLR19.2; NALP8; PAN4; NOD16	CLR19.2; NALP8; PAN4; NOD16
Homo sapiens	RefSeq	NM_015922.1	ILMN_13529	NSDHL	NM_015922.1	NM_015922.1		50814	8393515	NM_015922.1	NSDHL	NP_057006.1	ILMN_1692163	0004260392	S	1331	TGGGCTCTCTCGACACGTTGCTCAGCCAGTCACTCCTTCCCCTGTGGATT	X	+	151788331-151788380	Xq28e	Homo sapiens NAD(P) dependent steroid dehydrogenase-like (NSDHL), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 14506130] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [pmid 10710235] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3-beta-hydroxy-4-beta-methyl-5-alpha-cholesta-8,24-dien-4-alpha-carboxylate + NAD(P)+ = 4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-one + CO2 + NAD(P)H [goid 252] [pmid 14506130] [evidence EXP]; Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [pmid 10710235] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + 3-beta-hydroxy-4-alpha-methyl-5-alpha-cholest-7-ene-4-beta-carboxylate = NAD(P)H + H+ + CO2 + 4-alpha-methyl-5-alpha-cholest-7-en-3-one [goid 47012] [evidence IEA]	H105E3; XAP104	H105E3; XAP104
Homo sapiens	RefSeq	XM_937100.1	ILMN_164085	LOC728285	XM_001127070.1	XM_001127070.1		728285	113426894	XM_001127070.1	LOC728285	XP_001127070.1	ILMN_1660067	0003940673	A	467	CTCAACGCACGAAACATTCCCAGGTGCACAGAAGCTTGTGCAGACTCTTC	17	-	36469376-36469425	17q21.2a	PREDICTED: Homo sapiens similar to keratin associated protein 2-4 (LOC728285), mRNA.					
Homo sapiens	RefSeq	NM_001454.2	ILMN_13823	FOXJ1	NM_001454.2	NM_001454.2		2302	50301235	NM_001454.2	FOXJ1	NP_001445.2	ILMN_1802190	0003170204	S	2140	GTAGCTGAGGCTTAACTGGGAGGGATGCCGAGCTTGCTGGAACTACTGGG	17	-	71644195-71644244	17q25.1d	Homo sapiens forkhead box J1 (FOXJ1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Tolerance induction in the central lymphoid organs: the thymus and bone marrow [goid 2508] [evidence ISS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of germinal center formation [goid 2635] [evidence ISS]; Any process that activates or increases the frequency, rate, or extent of central B cell tolerance induction [goid 2897] [evidence ISS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin [goid 2924] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [evidence ISS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9073514] [evidence TAS]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; Any process that decreases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10553] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence ISS]; Any process that initiates the activity of an inactive GTPase of the Rho family through the replacement of GDP by GTP [goid 32862] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of T cell differentiation in the thymus [goid 33085] [evidence ISS]; The specification and formation of the polarity of a cell along its apical/basal axis [goid 35089] [evidence IEA]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45409] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell activation [goid 50869] [evidence ISS]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9073514] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HFH-4; HFH4; MGC35202; FKHL13	HFH-4; HFH4; MGC35202; FKHL13
Homo sapiens	RefSeq	NR_031702.1	ILMN_388745	MIR1255B2	NR_031702.1	NR_031702.1		100313835	269847503	NR_031702.1	MIR1255B2		ILMN_3311130	0000770347	S	10	GAGCAAAGAAAGTGGTTTGCGCCTCAAGAAACCACTTTCTTTGCTCATCC					Homo sapiens microRNA 1255b-2 (MIR1255B2), microRNA.					
Homo sapiens	RefSeq	XM_931116.1	ILMN_30839	LOC642853	XM_931116.1	XM_931116.1		642853	88983539	XM_931116.1	LOC642853	XP_936209.1	ILMN_1683886	0007210386	S	139	GGACCAGCTGCTGGGTCAACACTTCCGAAAACAGCGCTTCCTGGGGAGCG	5	-	55813159-55813208		PREDICTED: Homo sapiens hypothetical protein LOC642853 (LOC642853), mRNA.					
Homo sapiens	RefSeq	NR_002228.1	ILMN_994	LOC152667	NR_002228.1	NR_002228.1		152667	62000634	NR_002228.1	LOC152667		ILMN_2135740	0006980139	S	661	GTGCACCTACTCTGGGAGCAGCAACTCTGAGTCCAGCGCAGACAGTGAAG	4	+	154068692-154068741	4q31.3c	Homo sapiens NIP30-like (LOC152667) on chromosome 4.				rcNIP30	rcNIP30
Homo sapiens	RefSeq	NR_002228.1	ILMN_994	LOC152667	NR_002228.1	NR_002228.1		152667	62000634	NR_002228.1	LOC152667		ILMN_1771070	0004850068	S	1065	ATGCCCTAGGAGAATAGGCACCGGTCGACTTGCCAAAGGGTTTAGGCTTC	4	+	154069096-154069145	4q31.3c	Homo sapiens NIP30-like (LOC152667) on chromosome 4.				rcNIP30	rcNIP30
Homo sapiens	RefSeq	NM_006737.1	ILMN_29548	KIR3DL2	NM_006737.1	NM_006737.1		3812	5803051	NM_006737.1	KIR3DL2	NP_006728.1	ILMN_2190842	0005560731	S	1522	GCCACTGCCTGCTGCAGAGAAAACACACTCCTTTGCTTAGCCCACAAGGT	19	+	60070150-60070199	19q13.42b	Homo sapiens killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2 (KIR3DL2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7716543] [evidence TAS]	A defense response that is mediated by cells [goid 6968] [pmid 7716543] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NKAT4; CD158K; MGC125321; NKAT4B; NKAT4A; CL-5	NKAT4; CD158K; MGC125321; NKAT4B; NKAT4A; CL-5
Homo sapiens	RefSeq	XM_928676.1	ILMN_30933	LOC645662	XM_928676.1	XM_928676.1		645662	89050918	XM_928676.1	LOC645662	XP_933769.1	ILMN_1755076	0007550435	S	199	CACCCTCACATGTCAGCAGACACCTCCAGCTGTGTCATTCTTGCTTCTTG	19	+	6962718-6962767		PREDICTED: Homo sapiens hypothetical protein LOC645662 (LOC645662), mRNA.					
Homo sapiens	RefSeq	XM_936361.1	ILMN_38584	LOC642204	XM_936361.1	XM_936361.1		642204	89035852	XM_936361.1	LOC642204	XP_941454.1	ILMN_1704204	0003850403	S	39	GGCCCACGGCTCCATAGAACATGTCTACACGGGTTCCGGATACCGAATCC					PREDICTED: Homo sapiens hCG2042718 (LOC642204), mRNA.					
Homo sapiens	RefSeq	XM_933404.1	ILMN_42885	LOC653423	XM_933404.1	XM_933404.1		653423	89027788	XM_933404.1	LOC653423	XP_938497.1	ILMN_1710889	0003120612	I	565	GTCCAATCAGGTGCAGGTTTTTTGCGGAAGTGTCTGAGCAGCAGGGAGCG	8	+	7745137-7745186	8p23.1e	PREDICTED: Homo sapiens similar to sperm associated antigen 11 isoform H precursor, transcript variant 5 (LOC653423), mRNA.					
Homo sapiens	RefSeq	XM_928009.1	ILMN_44471	LOC644921	XM_928009.1	XM_928009.1		644921	88997789	XM_928009.1	LOC644921	XP_933102.1	ILMN_1679173	0005420128	S	1	ATGTACCAGAAAGCCTGGGTGCTCAGGCAGAAGCCTGCTGCAGCAGTGGA	6	+	131505383-131505432		PREDICTED: Homo sapiens hypothetical protein LOC644921 (LOC644921), mRNA.					
Homo sapiens	RefSeq	NM_005441.2	ILMN_165317	CHAF1B	NM_005441.2	NM_005441.2		8208	45827788	NM_005441.2	CHAF1B	NP_005432.1	ILMN_1674231	0004610731	S	2100	CAGTGAGTCCTCCCTGGCATCCTCGTGAAAGTGCACACACTTCATGGAGG	21	+	36710816-36710865	21q22.12b-q22.13a	Homo sapiens chromatin assembly factor 1, subunit B (p60) (CHAF1B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9614144] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16780588] [evidence IDA]; Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure [goid 5678] [pmid 7600578] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9614144] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The formation of nucleosomes on newly replicated DNA, coupled to strand elongation [goid 6335] [pmid 7600578] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 7600578] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 7600578] [evidence TAS]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [pmid 7600578] [evidence NAS]; Interacting selectively with an unfolded protein [goid 51082] [pmid 7600578] [evidence TAS]	CAF1P60; MPP7; MPHOSPH7; CAF-IP60; CAF1A; CAF1; CAF-1	CAF1P60; MPP7; MPHOSPH7; CAF-IP60; CAF1A; CAF1; CAF-1
Homo sapiens	RefSeq	NM_004629.1	ILMN_23865	FANCG	NM_004629.1	NM_004629.1		2189	4759335	NM_004629.1	FANCG	NP_004620.1	ILMN_1758728	0004220612	S	2467	TCCTGGACTGGTGAGATTGGTGGTAGGCCTGTGAAATTTGCCCTAGTTAC	9	-	35073949-35073998	9p13.3b	Homo sapiens Fanconi anemia, complementation group G (FANCG), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [pmid 9256465] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9256465] [evidence TAS]	Interacting selectively with damaged DNA [goid 3684] [pmid 9806548] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	XRCC9; FAG	XRCC9; FAG
Homo sapiens	Unigene	Hs.566764	ILMN_119022	HS.566764	Hs.566764		Hs.566764		43438247	BX955517			ILMN_1880849	0004830762	S	230	CCTACCTCCTACCTCCCCACACAGCAGCAATCAGTATCCAGAAGTTTATG	7	-	33773012-33773061		DKFZp781A1072_s1 781 (synonym: hlcc4) Homo sapiens cDNA clone DKFZp781A1072 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003090.2	ILMN_1523	SNRPA1	NM_003090.2	NM_003090.2		6627	50593001	NM_003090.2	SNRPA1	NP_003081.2	ILMN_1715179	0005080605	S	836	CGGGTCCTGAGCAGTGAGGCAGATGTATAATAATAGGCCCTCTTGGAACA	15	-	101821888-101821928:101821929-101821937	15q26.3d	Homo sapiens small nuclear ribonucleoprotein polypeptide A' (SNRPA1), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9731529] [evidence IDA]; Ribonucleoprotein complex containing small nuclear RNA U2; a component of the major spliceosome complex [goid 5686] [pmid 2928112] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 9731529] [evidence IC ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 2928112] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_020205.2	ILMN_7404	OTUD7B	NM_020205.2	NM_020205.2		56957	118026941	NM_020205.2	OTUD7B	NP_064590.2	ILMN_3239298	0000840112	S	6051	GGGGTGTGTGAGTGAAGGGGGAAGGTAGACCCTTTAACCCCAAGTGAGGG	1	-	149912543-149912592	1q21.2a	Homo sapiens OTU domain containing 7B (OTUD7B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11463333] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11463333] [evidence IDA]	The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43124] [pmid 11463333] [evidence IDA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18029035] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11463333] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZA20D1; CEZANNE	ZA20D1; CEZANNE
Homo sapiens	RefSeq	NM_002216.2	ILMN_8972	ITIH2	NM_002216.2	NM_002216.2		3698	70778917	NM_002216.2	ITIH2	NP_002207.2	ILMN_1808494	0000730722	S	2790	AGGAAAGGACCCTGAGAAGCCAGAGGCCAGCATGGAAGTGAAGGGGCAGA	10	+	7786217-7786243:7786754-7786776	10p14e-p14d	Homo sapiens inter-alpha (globulin) inhibitor H2 (ITIH2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]; The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	SHAP; H2P	SHAP; H2P
Homo sapiens	RefSeq	XM_372331.3	ILMN_44818	NKX1-2	XM_940698.1	XM_940698.1		390010	89033669	XM_940698.1	NKX1-2	XP_945791.1	ILMN_1742725	0002260592	A	571	AGTCCTGGCCCTCCCGGCACCGGCGCTCTGCACTTCCAGACTTTCCCCTC				10q26.13d	PREDICTED: Homo sapiens NK1 transcription factor related, locus 2 (Drosophila) (NKX1-2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	XR_037612.1	ILMN_353272	LOC341784	XR_037612.1	XR_037612.1		341784	169206078	XR_037612.1	LOC341784		ILMN_3296923	0004780692	M	1968	CATCTGAGGGGCTGTCCTGCTTCCTAGCCCCAGCCAGAGTTCAATCTTGG				13q12.3a	PREDICTED: Homo sapiens misc_RNA (LOC341784), miscRNA.					
Homo sapiens	RefSeq	XM_001131315.1	ILMN_168981	LOC389101	XM_001131315.1	XM_001131315.1		389101	113415004	XM_001131315.1	LOC389101	XP_001131315.1	ILMN_3277993	0006620010	M	247	CGGCAGCCTTGTCACAAGATAGCGCGGAAAGCGAAGAAGGAAGTTCCCGT				3p22.3c	PREDICTED: Homo sapiens similar to ribosomal protein L23a (LOC389101), mRNA.					
Homo sapiens	RefSeq	XM_001131315.1	ILMN_168981	LOC389101	XM_001131315.1	XM_001131315.1		389101	113415004	XM_001131315.1	LOC389101	XP_001131315.1	ILMN_3201517	0001450026	A	612	CTATGACAAAGATGTGGTCAAGGTCAACACCCTGATTCGGCCTGATGGAG				3p22.3c	PREDICTED: Homo sapiens similar to ribosomal protein L23a (LOC389101), mRNA.					
Homo sapiens	RefSeq	NM_178814.2	ILMN_31355	AP1S3	NM_001039569.1	NM_001039569.1		130340	88703050	NM_001039569.1	AP1S3	NP_001034658.1	ILMN_1768610	0004480491	S	1672	GCTTCCTGGAATGAAAATTCTGTATAACCAGGTCCTAACAGTGATCAGAC	2	-	224622327-224622376	2q36.1d	Homo sapiens adaptor-related protein complex 1, sigma 3 subunit (AP1S3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15569716] [evidence EXP]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]		
Homo sapiens	RefSeq	NM_015242.2	ILMN_12595	CENTD2	NM_015242.3	NM_015242.3		116985	92091602	NM_015242.3	CENTD2	NP_056057.1	ILMN_1786357	0000460747	I	462	AGAACTAAAAGTGCTGGGCTGTGTGGGTCGGGGCTGTGTGGACAGAGGGG	11	-	72101333-72101382	11q13.4a-q13.4b	Homo sapiens centaurin, delta 2 (CENTD2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11804590] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 11804590] [evidence IMP]; The cell cycle process whereby rearrangement of the spatial distribution of actin filaments and associated proteins occurs [goid 30037] [pmid 11804590] [evidence TAS]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; Any process that activates or increases the activity of the GTPase Cdc42 [goid 43089] [pmid 11804590] [evidence IDA]; Any process that modulates the frequency, rate or extent of the movement of a cell [goid 51270] [pmid 11804590] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone [goid 51491] [pmid 11804590] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the assembly a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51497] [pmid 11804590] [evidence IMP]	Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [pmid 11804590] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with phosphatidylinositol-3,4,5-triphosphate, the triphosphorylated derivative of phosphatidylinositol [goid 5547] [pmid 11804589] [evidence IDA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [pmid 11804590] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ARAP1; KIAA0782	ARAP1; KIAA0782
Homo sapiens	RefSeq	XM_926885.1	ILMN_36122	LOC643580	XM_926885.1	XM_926885.1		643580	89031050	XM_926885.1	LOC643580	XP_931978.1	ILMN_1691704	0003800687	S	183	CATTTGGGCCTTTGACGTGCCGCATACCCAGCACTACTGTGAATTTGTGC	10	+	46200125-46200174		PREDICTED: Homo sapiens similar to Glutamate dehydrogenase 1, mitochondrial precursor (GDH) (Memory-related protein 2) (MRG-2) (LOC643580), mRNA.					
Homo sapiens	RefSeq	NM_153705.2	ILMN_23677	KDELC2	NM_153705.4	NM_153705.4		143888	153218486	NM_153705.4	KDELC2	NP_714916.3	ILMN_1651557	0006110301	S	3889	CAGCAGCCTTAATCTACATAATTCTTCATCTCGCCAATTCAGCCGCAGCC	11	-	108343205-108343254	11q22.3c	Homo sapiens KDEL (Lys-Asp-Glu-Leu) containing 2 (KDELC2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]			MGC33424	MGC33424
Homo sapiens	RefSeq	XM_934182.1	ILMN_33607	LOC647022	XM_934182.1	XM_934182.1		647022	89040253	XM_934182.1	LOC647022	XP_939275.1	ILMN_1768407	0002680192	S	74	TCTCCATCTCCACCTCTCCATCTTCTGCTCCTGGCCATTCCTGGCACGGG	16	+	28668944-28668993		PREDICTED: Homo sapiens hypothetical protein LOC647022 (LOC647022), mRNA.					
Homo sapiens	RefSeq	XM_925796.1	ILMN_173399	LOC727787	XM_001125802.1	XM_001125802.1		727787	113428392	XM_001125802.1	LOC727787	XP_001125802.1	ILMN_1680056	0003610541	S	936	GCCTTCACCCACAGAACCAAGCTCCAAATCTGGTGAGACCTCCTACAAGC	19	+	156295-156326:156530-156547		PREDICTED: Homo sapiens similar to Killer cell immunoglobulin-like receptor 3DL2 precursor (MHC class I NK cell receptor) (Natural killer-associated transcript 4) (NKAT-4) (p70 natural killer cell receptor clone CL-5) (CD158k antigen) (LOC727787), mRNA.					
Homo sapiens	RefSeq	XR_000549.1	ILMN_39714	FLJ34690	XR_000549.1	XR_000549.1		284034	89041200	XR_000549.1	FLJ34690		ILMN_1676435	0000510364	A	2044	CTTCCGCAGTGGCTGAACTAATTTACACTCCCACCGGCAGGGTCAAAGCA	17	+	12480513-12480562		PREDICTED: Homo sapiens hypothetical protein FLJ34690 (FLJ34690), misc RNA.					
Homo sapiens	RefSeq	NM_002034.2	ILMN_23715	FUT5	NM_002034.2	NM_002034.2		2527	52485798	NM_002034.2	FUT5	NP_002025.2	ILMN_1773310	0006290411	S	1791	GGGTGTGACCTCGGCGTGACTCTGATAGTGCCTGTGGATGTGTTGCGATG	19	-	5865984-5866033	19p13.3b	Homo sapiens fucosyltransferase 5 (alpha (1,3) fucosyltransferase) (FUT5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11698403] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 1339443] [evidence TAS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 11698403] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of L-fucose (6-deoxy-Lgalactose) [goid 42355] [pmid 11698403] [evidence NAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-(1,3)-N-acetyl-D-glucosaminyl-R = GDP + beta-D-galactosyl-(1,3)-[alpha-L-fucosyl-(1,4)]-N-acetyl-D-glucosaminyl-R [goid 17060] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,3)-linkage [goid 46920] [pmid 11698403] [evidence TAS]	FUC-TV	FUC-TV
Homo sapiens	RefSeq	NM_153701.1	ILMN_4594	IL12RB1	NM_153701.1	NM_153701.1		3594	24497439	NM_153701.1	IL12RB1	NP_714912.1	ILMN_1815890	0006400370	I	1756	CCCAGCCTGGTCCCATATCATAGTGAAATGGTGCCTGTAAAGCTCTCAGC	19	-	18181423-18181472	19p13.11c	Homo sapiens interleukin 12 receptor, beta 1 (IL12RB1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7911493] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7911493] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8943050] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [pmid 8943050] [evidence TAS]	CD212; IL-12R-BETA1; IL12RB; MGC34454	CD212; IL-12R-BETA1; IL12RB; MGC34454
Homo sapiens	RefSeq	NM_005535.1	ILMN_4594	IL12RB1	NM_153701.1	NM_153701.1		3594	24497439	NM_153701.1	IL12RB1	NP_714912.1	ILMN_1699908	0004810333	A	974	GGGAAGATGCCCTATCTCTCGGGTGCTGCCTACAACGTGGCTGTCATCTC	19	-	18182983-18183032	19p13.11c	Homo sapiens interleukin 12 receptor, beta 1 (IL12RB1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7911493] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7911493] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8943050] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [pmid 8943050] [evidence TAS]	CD212; IL-12R-BETA1; IL12RB; MGC34454	CD212; IL-12R-BETA1; IL12RB; MGC34454
Homo sapiens	RefSeq	NM_000161.2	ILMN_175043	GCH1	NM_000161.2	NM_000161.2		2643	66932966	NM_000161.2	GCH1	NP_000152.1	ILMN_1788802	0001740382	I	1159	TGCACAAAACCACTGCCAGATAACCAGAGGGGCCTGGGAAGGGAGAAGAA	14	-	55310440-55310489	14q22.2b-q22.3a	Homo sapiens GTP cyclohydrolase 1 (GCH1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16778797] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10907721] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 3318829] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2463916] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [pmid 3318829] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11087823] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate [goid 6184] [pmid 2463916] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 17101830] [evidence IMP]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 9445252] [evidence IDA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 7678411] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [pmid 9445252] [evidence NAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 17717598] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [pmid 7678411] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [pmid 9445252] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [pmid 15604419] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 7678411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 12607127] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 9445252] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 15604419] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus [goid 34612] [pmid 9445252] [evidence IDA]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [pmid 16338639] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence ISS]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [pmid 7874165] [evidence IMP]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 17717598] [evidence IMP]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 12176133] [evidence IDA]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 15721862] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 11087823] [evidence IDA]	Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 3753653] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 11284739] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 8068008] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 16778797] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 8068008] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9092499] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16696853] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 3753653] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 14717702] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11087823] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 14717702] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 1669853] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DYT5; GTP-CH-1; GTPCH1; GCH	DYT5; GTP-CH-1; GTPCH1; GCH
Homo sapiens	RefSeq	NM_020463.1	ILMN_21228	SMEK2	NM_020463.1	NM_020463.1		57223	39930396	NM_020463.1	SMEK2	NP_065196.1	ILMN_1661650	0002230411	S	3871	TCCTTAGATCACCCTTGTAATGTGTTACGGGTCCATTTTTCCTGGAATCG	2	-	55629253-55629302	2p16.1d	Homo sapiens SMEK homolog 2, suppressor of mek1 (Dictyostelium) (SMEK2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	PSY2; FLFL2; FLJ31474; smk1; KIAA1387	PSY2; FLFL2; FLJ31474; smk1; KIAA1387
Homo sapiens	RefSeq	NM_198689.1	ILMN_26523	KRTAP10-7	NM_198689.2	NM_198689.2		386675	149944674	NM_198689.2	KRTAP10-7	NP_941962.1	ILMN_1677392	0003710050	S	1103	TGTGGCCCCACCTCAACCCAGAAGTCCAGCTGCTGAGTGATCTCCTTAAG	21	+	44846027-44846076	21q22.3d	Homo sapiens keratin associated protein 10-7 (KRTAP10-7), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KRTAP18-7; KAP18.7; KAP10.7	KRTAP18-7; KAP18.7; KAP10.7
Homo sapiens	RefSeq	XM_373031.3	ILMN_35197	LOC391692	XM_373031.3	XM_373031.3		391692	88976729	XM_373031.3	LOC391692	XP_373031.3	ILMN_1743207	0007000239	S	92	CCTCCCTGCACTGGTACATGGGTGAGGGCATGAATGAGATGGATGAGTAC	4	+	122592423-122592472		PREDICTED: Homo sapiens similar to tubulin, beta 8 (LOC391692), mRNA.					
Homo sapiens	RefSeq	NM_000681.2	ILMN_23205	ADRA2A	NM_000681.2	NM_000681.2		150	15718669	NM_000681.2	ADRA2A	NP_000672.2	ILMN_1659371	0005720523	S	3191	TATCTTGTATGTCTGTGTGCCCCTCCTGCCCCGAAAGTGCTGACTATGGG	10	+	112830101-112830150	10q25.2a	Homo sapiens adrenergic, alpha-2A-, receptor (ADRA2A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 6259160] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2823383] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1354394] [evidence TAS]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 10896916] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9624180] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2823383] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10896916] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 1354394] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 10896916] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 9624180] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10896916] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 9624180] [evidence TAS]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4938] [pmid 10896916] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 15459] [pmid 1354394] [evidence TAS]	ZNF32; ALPHA2AAR; ADRA2R; ADRA2; ADRAR	ZNF32; ALPHA2AAR; ADRA2R; ADRA2; ADRAR
Homo sapiens	RefSeq	NM_004129.2	ILMN_21117	GUCY1B2	NM_004129.2	NM_004129.2		2974	54144652	NM_004129.2	GUCY1B2	NP_004120.1	ILMN_1652166	0000240647	S	2625	AGACAGCCGACCGGCGACAGCCTTCAGCTCCGACAAAGACACATCACCTT	13	-	50466844-50466893	13q14.3b	Homo sapiens guanylate cyclase 1, soluble, beta 2 (GUCY1B2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	GC-SB2	GC-SB2
Homo sapiens	RefSeq	NM_183246.1	ILMN_17122	PHACTR3	NM_183246.1	NM_183246.1		116154	34304355	NM_183246.1	PHACTR3	NP_899069.1	ILMN_2411864	0004060259	A	1222	CTTTCCAAACGGCTGAGCCAAAGACCTGCCGTGGAAGAGCTGGAGAGAAG	20	+	57814637-57814644:57844955-57844996	20q13.32b	Homo sapiens phosphatase and actin regulator 3 (PHACTR3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	SCAPIN1; H17739; MGC117178; C20orf101	SCAPIN1; H17739; MGC117178; C20orf101
Homo sapiens	RefSeq	NM_080672.3	ILMN_17122	PHACTR3	NM_183246.1	NM_183246.1		116154	34304355	NM_183246.1	PHACTR3	NP_899069.1	ILMN_1666222	0003440341	A	1874	CAGTTCTGCAGTGTAATGGAGGACGGGCAACGTGCATGTGCAGGCTCACC	20	+	57855873-57855922	20q13.32b	Homo sapiens phosphatase and actin regulator 3 (PHACTR3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	SCAPIN1; H17739; MGC117178; C20orf101	SCAPIN1; H17739; MGC117178; C20orf101
Homo sapiens	Unigene	Hs.554324	ILMN_111893	HS.554324	Hs.554324		Hs.554324		50477326	CR596519			ILMN_1886655	0000580102	S	384	AAACCCGTCACCCAGATCGTCAGCGCCGAGGCCTGGGGTAGAGCAGGTGA	7	+	142209194-142209243		full-length cDNA clone CS0DI056YK21 of Placenta Cot 25-normalized of Homo sapiens (human)					
Homo sapiens	RefSeq	NM_032461.2	ILMN_23554	SPANXB1	NM_032461.2	NM_032461.2		728695	22027490	NM_032461.2	SPANXB1	NP_115850.1	ILMN_2211030	0003370369	S	181	GGCCAACAAGACGATGCCGGAGACCCCAACTGGGGACTCAGACCCGCAAC	X	+	139924607-139924619:139925267-139925303	Xq27.1d	Homo sapiens SPANX family, member B1 (SPANXB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10906052] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [pmid 10906052] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SPANX-B; SPANXB	SPANX-B; SPANXB
Homo sapiens	RefSeq	NM_032461.2	ILMN_23554	SPANXB1	NM_032461.2	NM_032461.2		728695	22027490	NM_032461.2	SPANXB1	NP_115850.1	ILMN_2211032	0004120647	S	421	AGCTACATCCCTCAAACTTCGGCAATGAAAATAAAGTTTGAGAAGCTGAA	X	+	139925494-139925543	Xq27.1d	Homo sapiens SPANX family, member B1 (SPANXB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10906052] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [pmid 10906052] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SPANX-B; SPANXB	SPANX-B; SPANXB
Homo sapiens	RefSeq	XM_928285.1	ILMN_307810	POTEF	NM_001099771.1	NM_001099771.1		728378	153791351	NM_001099771.1	POTEF	NP_001093241.1	ILMN_1735698	0004920477	A	10	GATCTGTTGGCTACTACTGGCTTCTCCTGGCTGTTAAAAGCAGATGGTGG	2	-	130594551-130594558:130594559-130594600	2q21.1b	Homo sapiens POTE ankyrin domain family, member F (POTEF), mRNA.				POTEACTIN	
Homo sapiens	RefSeq	NM_001099771.1	ILMN_307810	POTEF	NM_001099771.1	NM_001099771.1		728378	153791351	NM_001099771.1	POTEF	NP_001093241.1	ILMN_3241758	0004850138	S	3614	GTCCTCTCCCTAGTTCACACAGGGGAGGTGATAGCATTGCTTTTGTGCAA	2	-	130547903-130547952	2q21.1b	Homo sapiens POTE ankyrin domain family, member F (POTEF), mRNA.				POTEACTIN	POTEACTIN
Homo sapiens	RefSeq	XM_932224.1	ILMN_138001	LOC440896	XM_932224.1	XM_932224.1		440896	89029557	XM_932224.1	LOC440896	XP_937317.1	ILMN_1678440	0000770100	S	8	GGCGGAGTAAATTAAACGTTATTCTCCGATCAAACAGGAGCTTCGGGTCC	9	-	68488068-68488117	9q12i	PREDICTED: Homo sapiens hypothetical gene supported by AK127288; AY343901 (LOC440896), mRNA.					
Homo sapiens	RefSeq	XM_942809.1	ILMN_33670	LOC387940	XM_942809.1	XM_942809.1		387940	89037149	XM_942809.1	LOC387940	XP_947902.1	ILMN_1710111	0006770072	A	450	GTGGTTTCAAAAGCAGAGAAAGAGAGACCTGAGCTAGCACACTCCTCCCC					PREDICTED: Homo sapiens hypothetical LOC387940 (LOC387940), mRNA.					
Homo sapiens	RefSeq	XM_940836.1	ILMN_36847	LOC152663	XM_940836.1	XM_940836.1		152663	88981366	XM_940836.1	LOC152663	XP_945929.1	ILMN_1744538	0004670075	A	133	CGTGTGTGCTATCTAGTGCACCTACCAAAAGTCCATGGGAGCGAGAGTCT				4q35.2c	PREDICTED: Homo sapiens similar to 60S ribosomal protein L7a (LOC152663), mRNA.					
Homo sapiens	RefSeq	XM_001720154.1	ILMN_353243	LOC100133232	XM_001720154.1	XM_001720154.1		100133232	169168346	XM_001720154.1	LOC100133232	XP_001720206.1	ILMN_3296884	0000610390	M	236	CCTCTGCCTCGGCCACCACTGCTGCTGGGAAAGAGTCGTGGGGCTGCTGA				5q32d	PREDICTED: Homo sapiens hypothetical protein LOC100133232 (LOC100133232), mRNA.					
Homo sapiens	RefSeq	NM_001316.2	ILMN_180459	CSE1L	NM_001316.2	NM_001316.2		1434	29029558	NM_001316.2	CSE1L	NP_001307.2	ILMN_1665797	0005130674	I	2901	AACCCCAAAATTCACCTGGCACAGTCACTTCACAAGTTGTCTACCGCCTG	20	+	47144848-47144897	20q13.13c	Homo sapiens CSE1 chromosome segregation 1-like (yeast) (CSE1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9323134] [evidence TAS]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9323134] [evidence TAS]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 7479798] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7479798] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17719542] [evidence IPI]; Interacting selectively with importin-alpha to mediate its transfer through the nuclear pore to the cytoplasm [goid 8262] [pmid 9323134] [evidence TAS]	CAS; MGC117283; XPO2; MGC130036; MGC130037; CSE1	XPO2; CSE1; CAS; MGC117283; MGC130036; MGC130037
Homo sapiens	RefSeq	NM_177436.1	ILMN_180459	CSE1L	NM_001316.2	NM_001316.2		1434	29029558	NM_001316.2	CSE1L	NP_001307.2	ILMN_1706238	0007000634	A	2960	GGTTCCATCAATGGTGAGCACCAGCCTGAATGCAGAAGCGCTCCAGTATC	20	+	47144907-47144907:47146293-47146341	20q13.13c	Homo sapiens CSE1 chromosome segregation 1-like (yeast) (CSE1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9323134] [evidence TAS]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9323134] [evidence TAS]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 7479798] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7479798] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17719542] [evidence IPI]; Interacting selectively with importin-alpha to mediate its transfer through the nuclear pore to the cytoplasm [goid 8262] [pmid 9323134] [evidence TAS]	CAS; MGC117283; XPO2; MGC130036; MGC130037; CSE1	XPO2; CSE1; CAS; MGC117283; MGC130036; MGC130037
Homo sapiens	RefSeq	NM_000569.6	ILMN_181791	FCGR3A	NM_000569.6	NM_000569.6		2214	51593094	NM_000569.6	FCGR3A	NP_000560.5	ILMN_1703679	0003610431	S	86	TTCCTTCCTGGTCCTGTTCTATGGTGGGGCTCCCTTGCCAGACTTCAGAC	1	-	161519683-161519732	1q23.3a	Homo sapiens Fc fragment of IgG, low affinity IIIa, receptor (CD16a) (FCGR3A), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11955599] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2138330] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2138330] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	CD16a; FCG3; CD16; FCGR3; IGFR3	CD16a; FCG3; CD16; FCGR3; IGFR3
Homo sapiens	RefSeq	NM_000569.6	ILMN_181791	FCGR3A	NM_000569.6	NM_000569.6		2214	51593094	NM_000569.6	FCGR3A	NP_000560.5	ILMN_2112580	0004050039	S	1864	CAGAATGAGAAAGCCTGAGAAGAAAGAACCAACCACAAGCACACAGGAAG	1	-	161511945-161511994	1q23.3a	Homo sapiens Fc fragment of IgG, low affinity IIIa, receptor (CD16a) (FCGR3A), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11955599] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2138330] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2138330] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	CD16a; FCG3; CD16; FCGR3; IGFR3	CD16a; FCG3; CD16; FCGR3; IGFR3
Homo sapiens	RefSeq	XM_932812.1	ILMN_43025	SRRM1L	XM_932812.1	XM_932812.1		401475	89028293	XM_932812.1	SRRM1L	XP_937905.1	ILMN_1661664	0003800747	S	1346	AAGAGCCAGTGGCAGCGCCAGAGCCGAAGAAGGAGACTGAAAGAAAAAGA					PREDICTED: Homo sapiens serine/arginine repetitive matrix 1-like (SRRM1L), mRNA.					
Homo sapiens	RefSeq	NM_002597.3	ILMN_23176	PDC	NM_022576.2	NM_022576.2		5132	32967589	NM_022576.2	PDC	NP_072098.1	ILMN_1779037	0003450575	A	560	CAGGTGCTGGGGACCGCTTTTCCTTAGATGTACTTCCTACACTGCTCATC	1	-	186413278-186413327	1q31.1a	Homo sapiens phosducin (PDC), transcript variant 2, mRNA.		The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7961975] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [pmid 8288249] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [pmid 7961975] [evidence TAS]	PhLP; PHD; MEKA; PhLOP	PhLP; PHD; MEKA; PhLOP
Homo sapiens	RefSeq	NM_014781.3	ILMN_308545	RB1CC1	NM_001083617.1	NM_001083617.1		9821	134304845	NM_001083617.1	RB1CC1	NP_001077086.1	ILMN_1736796	0003890092	S	5980	CAGTGGATTGGTCATCTGGGTTCTAAAGGGAAGAGTCTGTGCTACTAACC	8	-	53698199-53698248	8q11.23b	Homo sapiens RB1-inducible coiled-coil 1 (RB1CC1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that increases cell size [goid 45793] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FIP200; CC1; DRAGOU14	FIP200; CC1; DRAGOU14
Homo sapiens	RefSeq	NM_173482.1	ILMN_20199	CCDC105	NM_173482.1	NM_173482.1		126402	27735062	NM_173482.1	CCDC105	NP_775753.1	ILMN_1677859	0005870414	S	1607	CCAGCTGATTGGATGCTGGCTGGGACCTCGGAGAGCAGACACAGCCCCAT	19	+	14994956-14995005	19p13.12b	Homo sapiens coiled-coil domain containing 105 (CCDC105), mRNA.				FLJ40365	FLJ40365
Homo sapiens	RefSeq	NM_001420.3	ILMN_176515	ELAVL3	NM_001420.3	NM_001420.3		1995	49355760	NM_001420.3	ELAVL3	NP_001411.2	ILMN_2401143	0000610095	A	3792	TTATTAATAACAGTAATGGTAGCCGAGTGGCACGCGGGGGCGTGTGCTCT	19	-	11562983-11563032	19p13.2b	Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) (ELAVL3), transcript variant 1, mRNA.				PLE21; HUCL; MGC20653; HUC; DKFZp547J036	PLE21; HUCL; MGC20653; HUC; DKFZp547J036
Homo sapiens	RefSeq	NM_003617.2	ILMN_167992	RGS5	NM_003617.2	NM_003617.2		8490	41387215	NM_003617.2	RGS5	NP_003608.1	ILMN_2082273	0004670082	S	5584	ATGTTGCAACTAGCAACTCATCTTCGGAAGACACAGCCAGGAGAATGAAG	1	-	163112291-163112340	1q23.3c	Homo sapiens regulator of G-protein signaling 5 (RGS5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 10471929] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 10471929] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MSTP092; MST129; MST092; MSTP129; MST106; MSTP032; MSTP106	MSTP092; MST129; MST092; MSTP129; MST106; MSTP032; MSTP106
Homo sapiens	RefSeq	XM_001715013.1	ILMN_336600	LOC728846	XM_001715013.1	XM_001715013.1		728846	169163566	XM_001715013.1	LOC728846	XP_001715065.1	ILMN_3236988	0004050551	S	320	GCCAGGTCCTGCTTAGACACCGTGGAGAACGGCAAGCGCCGCACGGGGTA	2	-	242323465-242323514	2q37.3g	PREDICTED: Homo sapiens hypothetical LOC728846 (LOC728846), mRNA.					
Homo sapiens	RefSeq	NM_005116.5	ILMN_4333	SLC23A2	NM_203327.1	NM_203327.1		9962	44680147	NM_203327.1	SLC23A2	NP_976072.1	ILMN_1746578	0003060474	A	6506	GCGTGTTTCCAGGCACTTAGGACACCCTTCCCCACGTTGCCATCTTACTG	20	-	4833908-4833957	20p13a	Homo sapiens solute carrier family 23 (nucleobase transporters), member 2 (SLC23A2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9804989] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9804989] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 9804989] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acid, into, out of, within or between cells [goid 15851] [pmid 9804989] [evidence TAS]; The directed movement of molecular hydrogen (H2) into, out of, within or between cells [goid 15993] [pmid 10471399] [evidence NAS]; The chemical reactions and pathways involving L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 19852] [pmid 10556521] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate [goid 8523] [pmid 10471399] [evidence NAS]; Catalysis of the transfer of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acidfrom one side of a membrane to the other [goid 15205] [pmid 9804989] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	NBTL1; SLC23A1; SVCT2; YSPL2; KIAA0238	NBTL1; SLC23A1; SVCT2; YSPL2; KIAA0238
Homo sapiens	RefSeq	NM_203327.1	ILMN_4333	SLC23A2	NM_203327.1	NM_203327.1		9962	44680147	NM_203327.1	SLC23A2	NP_976072.1	ILMN_1655272	0000130689	I	53	AGACTCAGGGTGAAGGACACCACCAGCTTTCCAGGTTCCCCAGCTTGCAG	20	-	4951475-4951524	20p13a	Homo sapiens solute carrier family 23 (nucleobase transporters), member 2 (SLC23A2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9804989] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9804989] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 9804989] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acid, into, out of, within or between cells [goid 15851] [pmid 9804989] [evidence TAS]; The directed movement of molecular hydrogen (H2) into, out of, within or between cells [goid 15993] [pmid 10471399] [evidence NAS]; The chemical reactions and pathways involving L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 19852] [pmid 10556521] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate [goid 8523] [pmid 10471399] [evidence NAS]; Catalysis of the transfer of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acidfrom one side of a membrane to the other [goid 15205] [pmid 9804989] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	NBTL1; SLC23A1; SVCT2; YSPL2; KIAA0238	NBTL1; SLC23A1; SVCT2; YSPL2; KIAA0238
Homo sapiens	RefSeq	XM_928489.1	ILMN_44584	LOC442132	XM_928489.1	XM_928489.1		442132	88982458	XM_928489.1	LOC442132	XP_933582.1	ILMN_1782116	0004250326	I	3	GGGAGGTCTGAGAGCCCTTAGCATGGGTGGTGTGCTGGGAGGTGGTGGGT	5	-	7355264-7355313	5p15.31b	PREDICTED: Homo sapiens similar to hypothetical protein FLJ36144 (LOC442132), mRNA.					
Homo sapiens	RefSeq	NM_002105.2	ILMN_165464	LOC731314	XM_001129173.1	XM_001129173.1		731314	113423132	XM_001129173.1	LOC731314	XP_001129173.1	ILMN_1785756	0004120538	S	279	TGGCTTCACGGCTGGCTATGTGGACAGCAAGAGTCGTTTTCGCGGAAGCC					PREDICTED: Homo sapiens similar to H2A histone family, member X (LOC731314), mRNA.					H2AX; H2A.X; H2A/X
Homo sapiens	RefSeq	NM_153707.1	ILMN_4461	FAM154A	NM_153707.1	NM_153707.1		158297	24308463	NM_153707.1	FAM154A	NP_714918.1	ILMN_1764959	0001980070	S	1551	CCTGAGCCTCCTGGCTACACCTTTGAGGAAGTGGATGCTTTGGGTCACAG	9	-	18928851-18928900	9p22.1b	Homo sapiens family with sequence similarity 154, member A (FAM154A), mRNA.				C9orf138; MGC35182; FLJ35283	C9orf138; MGC35182; FLJ35283
Homo sapiens	RefSeq	NM_000596.2	ILMN_19001	IGFBP1	NM_000596.2	NM_000596.2		3484	61744447	NM_000596.2	IGFBP1	NP_000587.1	ILMN_1728445	0007400497	A	988	ACCCTTGGAATGGGAAGAGGATCCCTGGGTCTCCAGAGATCAGGGGAGAC	7	+	45899130-45899179	7p13b	Homo sapiens insulin-like growth factor binding protein 1 (IGFBP1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2454104] [evidence TAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2454104] [evidence TAS]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [pmid 2454104] [evidence TAS]	PP12; IGF-BP25; IBP1; hIGFBP-1; AFBP	PP12; IGF-BP25; IBP1; hIGFBP-1; AFBP
Homo sapiens	RefSeq	NM_000900.2	ILMN_28594	MGP	NM_000900.2	NM_000900.2		4256	49574513	NM_000900.2	MGP	NP_000891.2	ILMN_1651958	0000940735	S	44	GGAGCCTCTCTCCCTACTGCTGCTACACAAGACCCTGAGACTGACCTGCA	12	-	15038735-15038784	12p12.3e	Homo sapiens matrix Gla protein (MGP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 9916809] [evidence TAS]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [pmid 9916809] [evidence TAS]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 9916809] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 9916809] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of bone [goid 8147] [pmid 9916809] [evidence TAS]	NTI; GIG36; MGLAP	NTI; GIG36; MGLAP
Homo sapiens	RefSeq	NM_000900.2	ILMN_28594	MGP	NM_000900.2	NM_000900.2		4256	49574513	NM_000900.2	MGP	NP_000891.2	ILMN_2071809	0001430487	S	277	CCGAGAACGCTCTAAGCCTGTCCACGAGCTCAATAGGGAAGCCTGTGATG	12	-	15035161-15035210	12p12.3e	Homo sapiens matrix Gla protein (MGP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 9916809] [evidence TAS]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [pmid 9916809] [evidence TAS]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 9916809] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 9916809] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of bone [goid 8147] [pmid 9916809] [evidence TAS]	NTI; GIG36; MGLAP	NTI; GIG36; MGLAP
Homo sapiens	RefSeq	NM_018114.4	ILMN_164808	DALRD3	NM_018114.4	NM_018114.4		55152	58331231	NM_018114.4	DALRD3	NP_060584.3	ILMN_1776054	0003870754	I	80	CCAGGCTTCGTGGGACCAACAGGGCTAATCCTGCCCCACGGATCTAATCC	3	-	49058338-49058387	3p21.31d	Homo sapiens DALR anticodon binding domain containing 3 (DALRD3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ10496	FLJ10496
Homo sapiens	RefSeq	NR_031648.1	ILMN_388571	MIR1246	NR_031648.1	NR_031648.1		100302142	269847260	NR_031648.1	MIR1246		ILMN_3308355	0006520292	S	22	GAGCAGGAGTGGACACCTGACCCAAAGGAAATCAATCCATAGGCTAGCAA					Homo sapiens microRNA 1246 (MIR1246), microRNA.					
Homo sapiens	RefSeq	NM_207371.3	ILMN_181883	C10ORF140	NM_207371.3	NM_207371.3		387640	148762981	NM_207371.3	C10orf140	NP_997254.3	ILMN_3239861	0003520343	S	6472	GCCCTGGGTAAGGGCCATGCTGGTGTACTGTGTTGTGATGATGGAAGCAG	10	-	21842489-21842538	10p12.31b	Homo sapiens chromosome 10 open reading frame 140 (C10orf140), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	FLJ45187; DLN-1; DKFZp761J229	FLJ45187; DLN-1; DKFZp761J229
Homo sapiens	RefSeq	NM_003579.2	ILMN_181399	RAD54L	NM_003579.2	NM_003579.2		8438	19924136	NM_003579.2	RAD54L	NP_003570.1	ILMN_1658027	0001980291	S	2912	GCTGGTCTGGGTGTAGCTCTTAGAGGAAGGAGATAGGGAAAAGGGGCTCC	1	+	46516548-46516597	1p34.1a-p33d	Homo sapiens RAD54-like (S. cerevisiae) (RAD54L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8805304] [evidence TAS]	The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 8805304] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 8805304] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HR54; hRAD54; RAD54A; hHR54	HR54; hRAD54; RAD54A; hHR54
Homo sapiens	RefSeq	NM_176072.1	ILMN_165064	P2RY2	NM_176072.1	NM_176072.1		5029	28872744	NM_176072.1	P2RY2	NP_788086.1	ILMN_1690664	0002940255	I	341	TGGAGGTTCCAGGTCCAGATCCAAGTCAGATGGCAATGAAAGCCCTGGTC	11	+	72622726-72622775	11q13.4b	Homo sapiens purinergic receptor P2Y, G-protein coupled, 2 (P2RY2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8159738] [evidence TAS]	The regulation of the levels, transport, and metabolism of ions within a cell or between a cell and its external environment [goid 6873] [pmid 8159738] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 8159738] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7779087] [evidence TAS]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2U; MGC40010; P2RU1; P2Y2R; P2Y2; P2U1; P2UR; MGC20088; HP2U	P2U; MGC40010; P2RU1; P2Y2R; P2Y2; P2U1; P2UR; MGC20088; HP2U
Homo sapiens	RefSeq	XR_038364.1	ILMN_346293	LOC100134055	XR_038364.1	XR_038364.1		100134055	169217585	XR_038364.1	LOC100134055		ILMN_3244687	0005090239	S	499	GTTTAATCTGTAAGTGTTTACATTTAAAGACTAGGTGAGATTTTATAGTT					PREDICTED: Homo sapiens misc_RNA (LOC100134055), miscRNA.					
Homo sapiens	RefSeq	XM_001722366.1	ILMN_339209	FLJ36131	XM_001722366.1	XM_001722366.1		338999	169207818	XM_001722366.1	FLJ36131	XP_001722418.1	ILMN_3181480	0003290537	A	1532	GTAGCTCACGCCTGTAATCCTAGCAATTTGGGAGGCCGAGGTAAATGGAT					PREDICTED: Homo sapiens hypothetical protein FLJ36131, transcript variant 2 (FLJ36131), mRNA.					
Homo sapiens	RefSeq	XM_001722366.1	ILMN_339209	FLJ36131	XM_001722366.1	XM_001722366.1		338999	169207818	XM_001722366.1	FLJ36131	XP_001722418.1	ILMN_3257941	0004280215	M	17	GGAGGTATATACTTGTCCTCACCTGGATCATGCTGATGTGGCCCCATCCC					PREDICTED: Homo sapiens hypothetical protein FLJ36131, transcript variant 2 (FLJ36131), mRNA.					
Homo sapiens	RefSeq	XM_934511.1	ILMN_40519	CCDC40	XM_934511.1	XM_934511.1		55036	89041920	XM_934511.1	CCDC40	XP_939604.1	ILMN_1760638	0002750768	I	1907	CTGAGTGCGGAAACCCCATCCCTTCTCGATTGTTCTGCCTGAGGGCTGCA	17	+	75654327-75654376	17q25.3d	PREDICTED: Homo sapiens coiled-coil domain containing 40, transcript variant 4 (CCDC40), mRNA.					
Homo sapiens	RefSeq	NM_001098805.1	ILMN_309117	ANKRD20A4	NM_001098805.1	NM_001098805.1		728747	149363678	NM_001098805.1	ANKRD20A4	NP_001092275.1	ILMN_3240529	0006420095	S	3326	AACAAATCTGAAAATATGTCAAATTACGTATTTTTATGACCACGTAATGT	9	+	68714738-68714787	9q12i	Homo sapiens ankyrin repeat domain 20 family, member A4 (ANKRD20A4), mRNA.					
Homo sapiens	Unigene	Hs.253460	ILMN_83480	HS.253460	Hs.253460		Hs.253460		6504561	AW205089			ILMN_1849342	0002490037	S	208	GGGTAGGACAGGGCAATGTTTCTCCAGTAAGAAGGATGTCATTCAGTCCC	17	+	16426589-16426638		UI-H-BI1-aem-b-12-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2719822 3, mRNA sequence					
Homo sapiens	Unigene	Hs.579370	ILMN_131551	HS.579370	Hs.579370		Hs.579370		10033853	BE673312			ILMN_1858486	0006130240	S	376	CCATATAAAGAACTGCCCCGATGCCTGTGTAGGGAGGGTGAGTGTGAGGG	18	-	72813411-72813460		7d33a07.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:3249012 3 similar to contains element TAR1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_130839.1	ILMN_178105	UBE3A	NM_130839.1	NM_130839.1		7337	19718763	NM_130839.1	UBE3A	NP_570854.1	ILMN_1654323	0005560059	I	471	CCCAGGCGCGGGGGCGACGACAGGTTAAAAATCTGTAAGAGCCTGATTTT	15	-	25657091-25657118:25683636-25683657	15q11.2e	Homo sapiens ubiquitin protein ligase E3A (UBE3A), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8221889] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8221889] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 8988171] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16493710] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	EPVE6AP; AS; FLJ26981; ANCR; HPVE6A; E6-AP	EPVE6AP; AS; FLJ26981; ANCR; HPVE6A; E6-AP
Homo sapiens	RefSeq	NM_003183.4	ILMN_165100	ADAM17	NM_003183.4	NM_003183.4		6868	73747888	NM_003183.4	ADAM17	NP_003174.3	ILMN_1765779	0005420762	S	2437	CCAAAACTGGACCACCAGAGAATGGACACCATCCAGGAAGACCCCAGCAC	2	-	9630477-9630526	2p25.1d	Homo sapiens ADAM metallopeptidase domain 17 (ADAM17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9574564] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9034190] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10527948] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC71942; CD156b; TACE; cSVP	MGC71942; cSVP; CD156b; TACE
Homo sapiens	RefSeq	NM_003183.4	ILMN_165100	ADAM17	NM_003183.4	NM_003183.4		6868	73747888	NM_003183.4	ADAM17	NP_003174.3	ILMN_2121068	0005260546	S	3474	CCTGTAATCCCAGCACTTGGAGAGGCTGAGGTTGCGCCACTACACTCCAG	2	-	9629440-9629489	2p25.1d	Homo sapiens ADAM metallopeptidase domain 17 (ADAM17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9574564] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9034190] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10527948] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC71942; CD156b; TACE; cSVP	MGC71942; cSVP; CD156b; TACE
Homo sapiens	Unigene	Hs.571599	ILMN_123780	HS.571599	Hs.571599		Hs.571599		31873791	BX537817			ILMN_1848214	0001050504	S	3231	GGGCACTTCCTTGCTTCCCATGATACTTGGGATGGTGCTGTCAGTGGAGC					Homo sapiens mRNA; cDNA DKFZp686B1082 (from clone DKFZp686B1082)					
Homo sapiens	RefSeq	NM_003071.2	ILMN_1136	HLTF	NM_003071.3	NM_003071.3		6596	117968550	NM_003071.3	HLTF	NP_003062.2	ILMN_1798588	0004250041	I	3940	CTGAGGTATAAATATAGTCTGTGGGAGTGAGAGGCAAACCAGTCCTACCC	3	-	150231955-150232004	3q24f	Homo sapiens helicase-like transcription factor (HLTF), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7876228] [evidence TAS]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7876228] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZBU1; SMARCA3; HIP116; HLTF1; RNF80; HIP116A; SNF2L3	ZBU1; HIP116; HLTF1; HLTF; RNF80; HIP116A; SNF2L3
Homo sapiens	Unigene	Hs.164221	ILMN_79964	HS.164221	Hs.164221		Hs.164221		51464044	XM_498958			ILMN_1889878	0006040020	S	1230	CTAGACACACGGCTCTGTGGAGGACGAGGAAGTGCCGTCAGGTGAGACTT					PREDICTED: Homo sapiens LOC440998 (LOC440998), mRNA					
Homo sapiens	Unigene	Hs.146013	ILMN_78281	HS.146013	Hs.146013		Hs.146013		24813825	CA449405			ILMN_1847793	0002230370	S	379	GCGGGAGGGAAAGAGAAAACTAGAGAAGCAGGGCGGTCAAAAGTGAGACG	11	+	10535650-10535699		UI-H-EI1-ayt-m-14-0-UI.s1 NCI_CGAP_EI1 Homo sapiens cDNA clone UI-H-EI1-ayt-m-14-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020638.2	ILMN_10473	FGF23	NM_020638.2	NM_020638.2		8074	15055547	NM_020638.2	FGF23	NP_065689.1	ILMN_1696488	0002060333	S	2171	CTTACCCCATTACTGCGGTTCTTCCTGTAAGGGGGCTCCATTTTCCTCCC	12	-	4478190-4478239	12p13.32a	Homo sapiens fibroblast growth factor 23 (FGF23), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9139660] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 17086194] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1697263] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence NAS]	The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17086194] [evidence EXP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]; The regulation of the levels, transport, and metabolism of phosphate ions within a cell or between a cell and its external environment [goid 30643] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	ADHR; PHPTC; HYPF; HPDR2	HYPF; ADHR; PHPTC; HPDR2
Homo sapiens	RefSeq	NM_206886.2	ILMN_183202	CCDC18	NM_206886.2	NM_206886.2		343099	62243483	NM_206886.2	CCDC18	NP_996769.2	ILMN_2077406	0002230687	S	4227	CCATGCAAAGTGGAAGATTTCTGCTGACTCTCAAAAGTCTTCTGTTCAGC	1	+	93502866-93502915	1p22.1c-p22.1b	Homo sapiens coiled-coil domain containing 18 (CCDC18), mRNA.				dJ717I23.1; NY-SAR-41; RP4-717I23.1	dJ717I23.1; NY-SAR-41; RP4-717I23.1
Homo sapiens	RefSeq	NM_152440.3	ILMN_19008	C12ORF66	NM_152440.4	NM_152440.4		144577	153251728	NM_152440.4	C12orf66	NP_689653.3	ILMN_1736995	0005090025	S	2494	CGGCAGGTGTTCATGGGAAGTAGGTGGATCAGTGAAGGCATAATGGGCTG	12	-	64586475-64586524	12q14.2b	Homo sapiens chromosome 12 open reading frame 66 (C12orf66), mRNA.					
Homo sapiens	RefSeq	NM_007321.1	ILMN_26861	RANBP3	NM_007321.1	NM_007321.1		8498	6466463	NM_007321.1	RANBP3	NP_015560.1	ILMN_1680082	0002000465	I	2396	CATGGGGAGGGCTGGGGACTATGCAATTCCAAAGGGAATGAAGCGGGGGA	19	-	5872126-5872175	19p13.3b	Homo sapiens RAN binding protein 3 (RANBP3), transcript variant RANBP3-c, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9637251] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11932251] [evidence IPI]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [pmid 9637251] [evidence TAS]	DKFZp586I1520	DKFZp586I1520
Homo sapiens	RefSeq	NM_000134.2	ILMN_18268	FABP2	NM_000134.2	NM_000134.2		2169	10938019	NM_000134.2	FABP2	NP_000125.1	ILMN_1740479	0003710091	S	2137	TGTACATTATTCAGGGGGTGATGGTTACAGCCCAGACTTTACCACTATGC	4	-	120457917-120457966	4q26f	Homo sapiens fatty acid binding protein 2, intestinal (FABP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 7883976] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 5504] [pmid 2824476] [evidence TAS]	FABPI; MGC133132; I-FABP	FABPI; MGC133132; I-FABP
Homo sapiens	RefSeq	NM_198081.1	ILMN_18691	SCML4	NM_198081.1	NM_198081.1		256380	37620211	NM_198081.1	SCML4	NP_932347.1	ILMN_1747436	0001300131	S	1860	AGCCTGGGCTGAGATGCTGGATCTGCTGCTTCCTGCCTACCTTTTGCAAG	6	-	108147681-108147730	6q21d	Homo sapiens sex comb on midleg-like 4 (Drosophila) (SCML4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		dJ47M23.1; FLJ36252	dJ47M23.1; FLJ36252
Homo sapiens	RefSeq	NM_033515.2	ILMN_28314	ARHGAP18	NM_033515.2	NM_033515.2		93663	39932588	NM_033515.2	ARHGAP18	NP_277050.2	ILMN_1791186	0003140445	S	3123	CCCAGGGATTTTAATGCACAAACCATATTGTGACAAGAGATGAGCCTCTG	6	-	129941134-129941183	6q22.33e	Homo sapiens Rho GTPase activating protein 18 (ARHGAP18), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	MGC126757; bA307O14.2; MGC138145; FLJ25728; MacGAP	MGC126757; bA307O14.2; MGC138145; FLJ25728; MacGAP
Homo sapiens	RefSeq	XM_939048.1	ILMN_308482	OTUD3	NM_015207.1	NM_015207.1		23252	149192870	NM_015207.1	OTUD3	NP_056022.1	ILMN_1779280	0001580010	A	6091	GTCAGTCTCCTTTACAGAGGGGTGGATGTATCCGTGGAGGAGGGGCCTTC	1	+	20111601-20111650	1p36.13a	Homo sapiens OTU domain containing 3 (OTUD3), mRNA.				DUBA4; RP11-460G22.1; KIAA0459	
Homo sapiens	RefSeq	XM_001717272.1	ILMN_335477	LOC100131283	XM_001717272.1	XM_001717272.1		100131283	169169053	XM_001717272.1	LOC100131283	XP_001717324.1	ILMN_3199697	0000940167	A	1015	CTGAAGGCGAGTCCCAGCCAAACTAGGTTCAAAGGACCCAGTGGAGGGGA				6p12.3e	PREDICTED: Homo sapiens hypothetical LOC100131283 (LOC100131283), mRNA.					
Homo sapiens	RefSeq	XM_931059.1	ILMN_32164	LOC642751	XM_931059.1	XM_931059.1		642751	89060273	XM_931059.1	LOC642751	XP_936152.1	ILMN_1702278	0000670307	S	241	GCATCTTCCTCCCAGGCTGAGGATGAAGCCAGTTTCAAAGATGACGGAGC	X	+	147321385-147321434		PREDICTED: Homo sapiens hypothetical protein LOC642751 (LOC642751), mRNA.					
Homo sapiens	RefSeq	NM_015513.2	ILMN_26101	CRELD1	NM_015513.3	NM_015513.3		78987	116875822	NM_015513.3	CRELD1	NP_056328.2	ILMN_1659541	0000270307	I	515	CACGGCACCTTAGAACAGACCTTTTTCTTTCTCGCGTGGGGCCTGACTCC	3	+	9951020-9951069	3p25.3c	Homo sapiens cysteine-rich with EGF-like domains 1 (CRELD1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AVSD2; CIRRIN; DKFZP566D213	AVSD2; CIRRIN; DKFZP566D213
Homo sapiens	RefSeq	XM_001715938.1	ILMN_346647	PPIAP19	XM_001715938.1	XM_001715938.1		390006	169201793	XM_001715938.1	PPIAP19	XP_001715990.1	ILMN_3226929	0001980703	A	134	AGGAAGAGGCTTTTGCAGACGCTGCCGCCACCAGGAGCCCTGTAGTATCA				10q25.3a	PREDICTED: Homo sapiens peptidylprolyl isomerase A (cyclophilin A) pseudogene 19 (PPIAP19), mRNA.					
Homo sapiens	RefSeq	NM_025176.4	ILMN_20940	NINL	NM_025176.4	NM_025176.4		22981	55749677	NM_025176.4	NINL	NP_079452.3	ILMN_1789094	0005130703	S	4673	GCGTACACACATTCCAGAAAAGGCTTCACTCGCTGGGAACGTCAACCCAG	20	-	25434178-25434227	20p11.21a	Homo sapiens ninein-like (NINL), mRNA.				dJ691N24.1; FLJ11792; NLP	dJ691N24.1; FLJ11792; NLP
Homo sapiens	RefSeq	XM_001725474.1	ILMN_341026	LOC100129038	XM_001725474.1	XM_001725474.1		100129038	169210638	XM_001725474.1	LOC100129038	XP_001725526.1	ILMN_3260101	0001050594	M	69	GATTACAGGTATGAGCTACCATGCCCAGCTGATACAGGTAATTTTTAATA				16p13.12a	PREDICTED: Homo sapiens similar to PRO2812 (LOC100129038), mRNA.					
Homo sapiens	RefSeq	NR_002436.1	ILMN_10854	SNORA33	NR_002436.1	NR_002436.1		594839	71361645	NR_002436.1	SNORA33		ILMN_2096747	0006510433	S	66	GTAAAGCCATGTTACGAGCCTTAAGGACATTGAAGTCGTTAAGGTCCCTG	6	+	133138423-133138472	6q23.2b	Homo sapiens small nucleolar RNA, H/ACA box 33 (SNORA33), small nucleolar RNA.				ACA33	ACA33
Homo sapiens	RefSeq	XM_001723739.1	ILMN_345547	LOC100132810	XM_001723739.1	XM_001723739.1		100132810	169169236	XM_001723739.1	LOC100132810	XP_001723791.1	ILMN_3244125	0006620348	S	2758	CCCGTGTTGCCCGCCTTTGTTCAGTCCAGTAGGTCCCCAACAATGTCCTG	6	+	785413-785462		PREDICTED: Homo sapiens hypothetical protein LOC100132810 (LOC100132810), mRNA.					
Homo sapiens	RefSeq	NM_014489.1	ILMN_20695	FRAG1	NM_014489.1	NM_014489.1		27315	7657101	NM_014489.1	FRAG1	NP_055304.1	ILMN_1755405	0003710612	S	1834	TGGGATAGAGGGGTCAGATGCAGATCTCTACTGTAAAATGGGCTCCCTGG	11	+	3804042-3804091	11p15.4d	Homo sapiens FGF receptor activating protein 1 (FRAG1), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC799; PGAP2	MGC799; PGAP2
Homo sapiens	RefSeq	NM_001018078.1	ILMN_23428	FPGS	NM_001018078.1	NM_001018078.1		2356	66932989	NM_001018078.1	FPGS	NP_001018088.1	ILMN_1681724	0006480441	I	124	TGGAGTTCCAGTGATCCCGGAGTCTGAACCGGCAGTGAGAGTGGGGAAAG	9	+	129605452-129605501	9q34.11a	Homo sapiens folylpolyglutamate synthase (FPGS), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1409616] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7721888] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7721888] [evidence TAS]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [pmid 10964921] [evidence ISS]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [pmid 10964921] [evidence ISS]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 7721888] [evidence TAS]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [pmid 10964921] [evidence ISS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [pmid 7721888] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Homo sapiens	RefSeq	NM_004957.4	ILMN_23428	FPGS	NM_001018078.1	NM_001018078.1		2356	66932989	NM_001018078.1	FPGS	NP_001018088.1	ILMN_1713948	0000380168	A	2256	AGAAATGGCAAAGCCTTCGACTGACCCTTGACCCCCTGCTCCCTCAGCAG	9	+	129616158-129616207	9q34.11a	Homo sapiens folylpolyglutamate synthase (FPGS), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1409616] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7721888] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7721888] [evidence TAS]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [pmid 10964921] [evidence ISS]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [pmid 10964921] [evidence ISS]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 7721888] [evidence TAS]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [pmid 10964921] [evidence ISS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [pmid 7721888] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Homo sapiens	RefSeq	Hs.514745	ILMN_164786	LOC728473	XM_001126087.1	XM_001126087.1		728473	113427894	XM_001126087.1	LOC728473	XP_001126087.1	ILMN_1816925	0004610041	S	1003	GCTCTAAGGGCTCGGGAAGGGACCCGGCATTTTACCCTCCAGATTCCCAA				18q11.2a	PREDICTED: Homo sapiens hypothetical LOC728473 (LOC728473), mRNA.					
Homo sapiens	RefSeq	NM_001624.1	ILMN_180410	AIM1	NM_001624.2	NM_001624.2		202	116014343	NM_001624.2	AIM1	NP_001615.1	ILMN_1688625	0000580255	S	6919	GGGGGCACTATAGCCACTAAACGAGGTGTGAAAGGCTCAAGAGGATGACC	6	+	107017701-107017750	6q21c	Homo sapiens absent in melanoma 1 (AIM1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	ST4	ST4
Homo sapiens	RefSeq	XM_929522.1	ILMN_137676	LOC644201	XM_929522.1	XM_929522.1		644201	89028076	XM_929522.1	LOC644201	XP_934615.1	ILMN_1813025	0001990707	S	2762	TGGGTGCAGGGCTGAGCCAGGACCAGGGCAGACACGGTCTCTCAGACAGG	8	+	74526834-74526883	8q21.11a	PREDICTED: Homo sapiens hypothetical protein LOC644201 (LOC644201), mRNA.					
Homo sapiens	RefSeq	NM_006357.2	ILMN_16828	UBE2E3	NM_006357.2	NM_006357.2		10477	33359695	NM_006357.2	UBE2E3	NP_006348.1	ILMN_2390338	0005340048	A	1021	GTATGCAGTGTGAAGGAGCAGAAGGCATCTTCTCACTGTGCTGCAAATCT	2	+	181635873-181635922	2q31.3b	Homo sapiens ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) (UBE2E3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UbcM2; UBCH9	UbcM2; UBCH9
Homo sapiens	RefSeq	NM_006357.2	ILMN_16828	UBE2E3	NM_006357.2	NM_006357.2		10477	33359695	NM_006357.2	UBE2E3	NP_006348.1	ILMN_1809652	0004610544	I	189	CTCCGACTTTCAATGTTCCACACTCCCCGGCCAGAGCCTCCTCGGCTTCT	2	+	181553775-181553824	2q31.3b	Homo sapiens ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) (UBE2E3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UbcM2; UBCH9	UbcM2; UBCH9
Homo sapiens	RefSeq	XM_944996.1	ILMN_16828	UBE2E3	NM_006357.2	NM_006357.2		10477	33359695	NM_006357.2	UBE2E3	NP_006348.1	ILMN_1669553	0002640360	A	387	GTCCAGTGATAGGCAAAGGTCCGATGATGAGAGCCCCAGCACCAGCAGTG	2	+	181555017-181555066	2q31.3b	Homo sapiens ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) (UBE2E3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UbcM2; UBCH9	
Homo sapiens	RefSeq	NR_024252.1	ILMN_370646	LOC729375	NR_024252.1	NR_024252.1		729375	209954674	NR_024252.1	LOC729375		ILMN_3239946	0003450037	S	1960	CACAGTCCCACCCATCTGTGGGTAACAAGGGGGTGTTCTTTTCAGCCTTG	3	-	129816731-129816780	3q21.3d	Homo sapiens family with sequence similarity 86, member A pseudogene (LOC729375), non-coding RNA.					
Homo sapiens	RefSeq	NM_148178.1	ILMN_3926	C9ORF23	NM_148178.1	NM_148178.1		138716	22325369	NM_148178.1	C9orf23	NP_680544.1	ILMN_2391345	0001770338	A	448	ACCCCCTGGACCCCAATGAGTGTGGTTACCAACCCCCAGGAGCACCCCCT	9	-	34610873-34610922	9p13.3c	Homo sapiens chromosome 9 open reading frame 23 (C9orf23), transcript variant 1, mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC29635; bA296L22.5	MGC29635; bA296L22.5
Homo sapiens	RefSeq	NM_148178.1	ILMN_3926	C9ORF23	NM_148178.1	NM_148178.1		138716	22325369	NM_148178.1	C9orf23	NP_680544.1	ILMN_1683175	0005130414	A	578	TGAGCCAGCCTGTTCTCCGGGCCTGAATGTCTGGGGTGCTTGTGCCTTTT	9	-	34610743-34610792	9p13.3c	Homo sapiens chromosome 9 open reading frame 23 (C9orf23), transcript variant 1, mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC29635; bA296L22.5	MGC29635; bA296L22.5
Homo sapiens	RefSeq	NM_018421.2	ILMN_27954	TBC1D2	NM_018421.2	NM_018421.2		55357	62198224	NM_018421.2	TBC1D2	NP_060891.2	ILMN_1769876	0002680021	S	2982	CCCTCAGTTTCCCCACTGGGACATTGTGTGCTGCAAAGCCATTGGTTGGG	9	-	100001298-100001347	9q22.33b	Homo sapiens TBC1 domain family, member 2 (TBC1D2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	FLJ10702; DKFZp761D1823; PARIS1; FLJ16244; FLJ42782; PARIS-1; TBC1D2A	FLJ10702; DKFZp761D1823; PARIS1; FLJ16244; FLJ42782; PARIS-1; TBC1D2A
Homo sapiens	RefSeq	NM_003779.2	ILMN_15783	B4GALT3	NM_003779.2	NM_003779.2		8703	13929468	NM_003779.2	B4GALT3	NP_003770.1	ILMN_1692267	0001030044	S	1819	CCGGGAAGTTGTTTGGTGAAGGAAGCCCCTCCCTGGGCATTTTCTGCCTA	1	-	161141181-161141230	1q23.3a	Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 (B4GALT3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 9405390] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	beta4Gal-T3	beta4Gal-T3
Homo sapiens	RefSeq	XM_371588.3	ILMN_174536	LOC729399	XR_015531.1	XR_015531.1		729399	113413409	XR_015531.1	LOC729399		ILMN_1718992	0001470301	S	1189	CCTAAGAAATGGAATAAGATTAAACTAGTGGTCACCCAAGAAGATGTAGA	2	+	200233174-200233223	2q33.1d	PREDICTED: Homo sapiens similar to selenophosphate synthetase (LOC729399), mRNA.					
Homo sapiens	RefSeq	NM_153031.1	ILMN_174536	LOC729399	XR_015531.1	XR_015531.1		729399	113413409	XR_015531.1	LOC729399		ILMN_1679719	0000160161	S	188	CTTCAGCTGTATGGCACCCTGTCTTCCTGTACACCAGAGGCTCCTCAGCT	2	+	200049527-200049576	2q33.1d	PREDICTED: Homo sapiens similar to selenophosphate synthetase (LOC729399), mRNA.					MGC126831
Homo sapiens	Unigene	Hs.498025	ILMN_96993	HS.498025	Hs.498025		Hs.498025		31148804	CD364714			ILMN_1817427	0004050204	S	616	GCAAGGCTGGGGTGCTTTGAGATTGTCCATGTCTGATCTACGCACCACGC	1	+	229219898-229219947		UI-H-FT2-bjm-o-24-0-UI.s1 NCI_CGAP_FT2 Homo sapiens cDNA clone UI-H-FT2-bjm-o-24-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003363.2	ILMN_172465	USP4	NM_003363.2	NM_003363.2		7375	40795664	NM_003363.2	USP4	NP_003354.2	ILMN_1798712	0006290435	A	3527	TGGGGATCCTGGCCCCTCAACCTCCTGTGGAACCCAGCAGTTCTGTTATA	3	-	49290103-49290152	3p21.31d	Homo sapiens ubiquitin specific peptidase 4 (proto-oncogene) (USP4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8183569] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 9827704] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 9464533] [evidence TAS]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11461834] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC149848; Unph; UNP; MGC149849	MGC149848; Unph; UNP; MGC149849
Homo sapiens	RefSeq	NM_003363.2	ILMN_172465	USP4	NM_003363.2	NM_003363.2		7375	40795664	NM_003363.2	USP4	NP_003354.2	ILMN_1773505	0003400367	I	844	TGGTGATAGCACTAGCACCTGTGGGATGCACAGTTCCGGTGTCAGCAGGG	3	-	49323951-49324000	3p21.31d	Homo sapiens ubiquitin specific peptidase 4 (proto-oncogene) (USP4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8183569] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 9827704] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 9464533] [evidence TAS]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11461834] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC149848; Unph; UNP; MGC149849	MGC149848; Unph; UNP; MGC149849
Homo sapiens	RefSeq	NM_032142.2	ILMN_7783	CEP192	NM_032142.2	NM_032142.2		55125	50811888	NM_032142.2	CEP192	NP_115518.2	ILMN_1703754	0004490154	A	6869	CCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGC	18	+	13114633-13114682	18p11.21d	Homo sapiens centrosomal protein 192kDa (CEP192), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]				
Homo sapiens	RefSeq	NM_145301.1	ILMN_10298	FAM18B2	NM_145301.1	NM_145301.1		201158	21945057	NM_145301.1	FAM18B2	NP_660344.1	ILMN_1700597	0003130484	I	1089	CTTGTAAAACTAAGGGGAAAAGGGCAGAAGAGAGGCAGCAGCGTGGTCCC	17	-	15346678-15346727	17p12a	Homo sapiens family with sequence similarity 18, member B2 (FAM18B2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC8763	MGC8763
Homo sapiens	RefSeq	XM_936923.1	ILMN_10298	FAM18B2	NM_145301.1	NM_145301.1		201158	21945057	NM_145301.1	FAM18B2	NP_660344.1	ILMN_1789407	0005420356	A	208	TCTTTCGAGTCAGTGCAATCATCGTCTGTCTTCTCTGTGAGTTGCTCAGC	17	-	15397789-15397838	17p12a	Homo sapiens family with sequence similarity 18, member B2 (FAM18B2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC8763	
Homo sapiens	RefSeq	XM_934900.1	ILMN_38242	SUZ12P	XM_934900.1	XM_934900.1		440423	89041319	XM_934900.1	SUZ12P	XP_939993.1	ILMN_1706240	0006480010	I	576	GCCAGCACTGCATAGCTTTCCTTGAAGAAGAGCAATTACTGCCCTTCAGG	17	+	26094027-26094076	17q11.2c	PREDICTED: Homo sapiens suppressor of zeste 12 homolog pseudogene, transcript variant 3 (SUZ12P), mRNA.					
Homo sapiens	RefSeq	NM_025233.5	ILMN_13627	COASY	NM_025233.5	NM_025233.5		80347	110227602	NM_025233.5	COASY	NP_079509.5	ILMN_2352326	0004280343	A	2206	CAGAAGCGCATTCCCAAGACTCATCAGGCCCTCGACTGAAAAGTTCTCAG	17	+	37971474-37971512:37971513-37971523	17q21.31a	Homo sapiens Coenzyme A synthase (COASY), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15937] [pmid 11994049] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + dephospho-CoA = ADP + CoA [goid 4140] [pmid 11994049] [evidence IDA]; Catalysis of the reaction: ATP + pantetheine 4'-phosphate = diphosphate + dephospho-CoA [goid 4595] [pmid 11994049] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ35179; pOV-2; NBP; UKR1; PPAT; DPCK	pOV-2; UKR1; DPCK; NBP; PPAT
Homo sapiens	RefSeq	NM_182915.2	ILMN_28778	STEAP3	NM_182915.2	NM_182915.2		55240	56549144	NM_182915.2	STEAP3	NP_878919.2	ILMN_1761577	0000620703	I	101	TGCATCCTGGGTTCTACTGGTCGTCCCACCTCAGTTCCTGTAGCAAAGAG	2	+	119704685-119704734	2q14.2b	Homo sapiens STEAP family member 3 (STEAP3), transcript variant 1, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	STMP3; dudlin-2; TSAP6	STMP3; dudlin-2; TSAP6
Homo sapiens	RefSeq	XM_936464.1	ILMN_38280	LOC441016	XM_936464.1	XM_936464.1		441016	88980294	XM_936464.1	LOC441016	XP_941557.1	ILMN_1791597	0001990162	A	35	TCACATTGGTGTGGCCCGCTTTTGGCTGCATTGGCTGGGGATCACTGGCA				4q12b	PREDICTED: Homo sapiens similar to hypertension-related calcium-regulated gene (LOC441016), mRNA.					
Homo sapiens	RefSeq	NM_206967.1	ILMN_26575	C16ORF74	NM_206967.1	NM_206967.1		404550	47894448	NM_206967.1	C16orf74	NP_996850.1	ILMN_1806149	0006960358	S	367	GGTCGTGCCCAGATGATGGAGAAATCGACCCAGAAGCCTGAGGAGGTGTC	16	-	84299105-84299114:84299115-84299154	16q24.1b	Homo sapiens chromosome 16 open reading frame 74 (C16orf74), mRNA.				MGC17624	MGC17624
Homo sapiens	RefSeq	NM_080823.2	ILMN_22708	SRMS	NM_080823.2	NM_080823.2		6725	22507413	NM_080823.2	SRMS	NP_543013.1	ILMN_1744200	0005490754	S	1267	TCTGGTCCTTCGGCGTCCTGCTGCACGAGGTTTTCACCTATGGCCAGTGT	20	-	62172553-62172602	20q13.33e	Homo sapiens src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (SRMS), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SRM; C20orf148; dJ697K14.1	SRM; C20orf148; dJ697K14.1
Homo sapiens	RefSeq	XM_933968.1	ILMN_45116	NBPF9	XM_933968.1	XM_933968.1		440670	88943105	XM_933968.1	NBPF9	XP_939061.1	ILMN_1721112	0002360133	I	288	GCTCTGTCCCCAGAGCAGTCACCCTCCACCCTGTATTTAGAAGGATAGTT	1	-	146049590-146049639		PREDICTED: Homo sapiens neuroblastoma breakpoint family, member 9, transcript variant 3 (NBPF9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NM_022308.1	ILMN_12918	ICA1	NM_022308.1	NM_022308.1		3382	12545396	NM_022308.1	ICA1	NP_071683.1	ILMN_1694399	0001410768	I	543	GGATCACAGTGACCTATAATGAGCCGTTGTGCTCCAGCCTGGGCGACAGA	7	-	8227510-8227553:8233793-8233798	7p21.3e	Homo sapiens islet cell autoantigen 1, 69kDa (ICA1), transcript variant 3, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 12682071] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8326004] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a secretory granule [goid 30667] [pmid 12682071] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	ICAp69; ICA69	ICAp69; ICA69
Homo sapiens	RefSeq	NM_018321.3	ILMN_4503	BRIX1	NM_018321.3	NM_018321.3		55299	55770899	NM_018321.3	BRIX1	NP_060791.3	ILMN_1679800	0002120445	S	801	CCAGTCACCAAACATGCATCGGCGTGTCATAAGATCCATCACAGCTGCAA	5	+	34925065-34925080:34925331-34925364	5p13.2d	Homo sapiens BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) (BRIX1), mRNA.				BRIX; FLJ11100	BRIX; FLJ11100
Homo sapiens	RefSeq	NM_018321.3	ILMN_4503	BRIX1	NM_018321.3	NM_018321.3		55299	55770899	NM_018321.3	BRIX1	NP_060791.3	ILMN_2155172	0001110722	S	919	CCACATGATCCCACTGCAGATGTTTTTGTAACACCAGCTGAGGAGAAACC	5	+	34925433-34925482	5p13.2d	Homo sapiens BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) (BRIX1), mRNA.				BRIX; FLJ11100	BRIX; FLJ11100
Homo sapiens	Unigene	Hs.86045	ILMN_73979	HS.86045	Hs.86045		Hs.86045		34531832	AK125664			ILMN_1851547	0000650180	S	2880	CCCCTGTGCTAGGGTGCCCATTTCAGCTTTTGACATTGCCCCTGTACTTT	X	-	54112167-54112216		Homo sapiens cDNA FLJ43676 fis, clone SYNOV4009129					
Homo sapiens	RefSeq	NM_001039500.1	ILMN_45009	FLJ32784	NM_001039500.1	NM_001039500.1		127731	87162450	NM_001039500.1	FLJ32784	NP_001034589.1	ILMN_2135456	0002810458	S	3364	TTGCCATATTGCCCGGGCTGGTCTTGAACTCCTGGGCTCAAGCGATCTGC	1	+	20537941-20537990	1p36.12b	Homo sapiens hypothetical protein FLJ32784 (FLJ32784), mRNA.				FLJ43845	FLJ43845
Homo sapiens	RefSeq	XR_038701.1	ILMN_335329	LOC152845	XR_038701.1	XR_038701.1		152845	169166745	XR_038701.1	LOC152845		ILMN_3275929	0007320739	M	1509	TGCTCACCACTTTGCAAGCTCAGCCTCAAGATTCCCCAGGAGCGGGGTGA				4q21.23a	PREDICTED: Homo sapiens misc_RNA (LOC152845), miscRNA.					
Homo sapiens	RefSeq	XM_942717.1	ILMN_176316	NOC4L	XM_001134389.1	XM_001134389.1		79050	113423984	XM_001134389.1	NOC4L	XP_001134389.1	ILMN_1806068	0004670307	I	845	TAGGGGCCAGCACCTCTTCCCCGATCCCACTGCCTCCACCCCCCACTCCC				12q24.33c	PREDICTED: Homo sapiens nucleolar complex associated 4 homolog (S. cerevisiae) (NOC4L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [pmid 15590835] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]		
Homo sapiens	Unigene	Hs.442098	ILMN_92409	HS.442098	Hs.442098		Hs.442098		31447442	CD515724			ILMN_1851451	0000130196	S	384	CTCTTTTCCCAAACCCAGGCACCGAAGGAGAAAGTGGAGGCAGAGCCCTG	2	+	59888294-59888343		AGENCOURT_14367543 NIH_MGC_181 Homo sapiens cDNA clone IMAGE:30399180 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001033505.1	ILMN_26942	CSTF3	NM_001033505.1	NM_001033505.1		1479	75709186	NM_001033505.1	CSTF3	NP_001028677.1	ILMN_1762002	0003420253	A	254	TATGACCTTGATGCTTGGAGCATTCTCATTCGAGAGGCACAGAATCAACC	11	-	33163300-33163308:33163431-33163471	11p13d	Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa (CSTF3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7984242] [evidence TAS]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [pmid 7984242] [evidence TAS]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 7984242] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1741396] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC75122; MGC43001; MGC117398; CSTF-77	MGC75122; MGC43001; MGC117398; CSTF-77
Homo sapiens	RefSeq	NM_001033505.1	ILMN_26942	CSTF3	NM_001033505.1	NM_001033505.1		1479	75709186	NM_001033505.1	CSTF3	NP_001028677.1	ILMN_2397880	0000650598	A	313	AGCACGGAAGACTTATGAACGCCTTGTTGCCCAGTTCCCCAGTTCTGGCA	11	-	33163241-33163290	11p13d	Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa (CSTF3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7984242] [evidence TAS]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [pmid 7984242] [evidence TAS]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 7984242] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1741396] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC75122; MGC43001; MGC117398; CSTF-77	MGC75122; MGC43001; MGC117398; CSTF-77
Homo sapiens	RefSeq	NM_033364.2	ILMN_28867	C3ORF15	NM_033364.3	NM_033364.3		89876	145309296	NM_033364.3	C3orf15	NP_203528.2	ILMN_1676749	0001010739	S	3950	CTGAAGGGCCAGATGGTAACTACATTAGGGTTTGCGGGTCTGATGGTCGC	3	+	119485466-119485515	3q13.33a	Homo sapiens chromosome 3 open reading frame 15 (C3orf15), mRNA.				AAT1alpha; AAT1; DKFZp781A2221	AAT1alpha; AAT1; DKFZp781A2221
Homo sapiens	RefSeq	NM_001024601.2	ILMN_7435	C1ORF227	NM_001024601.2	NM_001024601.2		149643	67003580	NM_001024601.2	C1orf227	NP_001019772.1	ILMN_1723568	0002600196	S	278	CCTTTACTGATACCACAACCAAAGAGCCTGTTCCCAACAGTGGCAGGAGC	1	-	213009272-213009321	1q32.3c	Homo sapiens chromosome 1 open reading frame 227 (C1orf227), mRNA.					
Homo sapiens	RefSeq	NM_020188.2	ILMN_1837	C16ORF61	NM_020188.2	NM_020188.2		56942	42476040	NM_020188.2	C16orf61	NP_064573.1	ILMN_1783333	0006400025	S	611	GGGCAGGGCGTTTAGTACTGTCTCCCCTTTACCAGCAAACCTGACTTCAC	16	-	79567257-79567306	16q23.2b	Homo sapiens chromosome 16 open reading frame 61 (C16orf61), mRNA.				DC13; 2310061C15Rik	DC13; 2310061C15Rik
Homo sapiens	RefSeq	NM_178864.2	ILMN_19973	NPAS4	NM_178864.2	NM_178864.2		266743	31341471	NM_178864.2	NPAS4	NP_849195.1	ILMN_1726459	0002480102	S	3225	CTGCCCAGATGGCCACCTCGTGGTGCTGCGGTGACTTTGTAGCCAACTTT	11	+	65950676-65950725	11q13.1e	Homo sapiens neuronal PAS domain protein 4 (NPAS4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	Le-PAS; PASD10; NXF	Le-PAS; PASD10; NXF
Homo sapiens	RefSeq	NM_173573.1	ILMN_165472	C11ORF35	NM_173573.1	NM_173573.1		256329	27734828	NM_173573.1	C11orf35	NP_775844.1	ILMN_1652602	0006180553	S	1798	CTGGAGGACTGTCGGCTCCAGAAAGAACACCGAGTTCGGGTGTGCCGGAA	11	-	555100-555111:555305-555342	11p15.5d	Homo sapiens chromosome 11 open reading frame 35 (C11orf35), mRNA.				MGC35138	MGC35138
Homo sapiens	RefSeq	XM_946056.1	ILMN_40772	LOC643669	XM_933621.2	XM_933621.2		643669	113428243	XM_933621.2	LOC643669	XP_938714.2	ILMN_1658304	0003120070	I	470	AGGTCCAGGAACAAGCCATCCGCATGCAAGGGCATCGCCAGCTCCACCAG	19	-	44093357-44093406	19q13.2a	PREDICTED: Homo sapiens hypothetical LOC643669, transcript variant 1 (LOC643669), mRNA.					
Homo sapiens	RefSeq	XM_933624.1	ILMN_40772	LOC643669	XM_933621.2	XM_933621.2		643669	113428243	XM_933621.2	LOC643669	XP_938714.2	ILMN_1673980	0006130195	A	1008	GGCTCAGCCCTGACACAGGAAGCACCCCCACACCTATGCACTCCCACTCC	19	-	44091494-44091543	19q13.2a	PREDICTED: Homo sapiens hypothetical LOC643669, transcript variant 1 (LOC643669), mRNA.					
Homo sapiens	RefSeq	NM_030980.1	ILMN_7800	ISG20L2	NM_030980.1	NM_030980.1		81875	13569959	NM_030980.1	ISG20L2	NP_112242.1	ILMN_2090397	0002690224	S	1727	AACAGCATCCTCTTCCACGCTCAGAAGTGTTCTGGTTGGGGCCAGGCATG	1	-	156692687-156692736	1q23.1a	Homo sapiens interferon stimulated exonuclease gene 20kDa-like 2 (ISG20L2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ12671	FLJ12671
Homo sapiens	RefSeq	NM_001013659.1	ILMN_16768	ZNF793	NM_001013659.1	NM_001013659.1		390927	61966772	NM_001013659.1	ZNF793	NP_001013681.1	ILMN_1806333	0007150632	S	1454	CCGTATCGTTGCAGAGAATGTGGAAAATCCTTCAGCCAGAAGTCATGCCT	19	+	42720412-42720461	19q13.12c	Homo sapiens zinc finger protein 793 (ZNF793), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_201264.1	ILMN_6157	NRP2	NM_201264.1	NM_201264.1		8828	41872556	NM_201264.1	NRP2	NP_957716.1	ILMN_2274306	0001410402	I	2464	ACCCTCAACAGGGAGGCTAAGTGTGGTACAGGGAGTTGAGACTGATGATG	2	+	206316553-206316602	2q33.3a	Homo sapiens neuropilin 2 (NRP2), transcript variant 6, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9288754] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11278319] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11112349] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9288754] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 11112349] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 11112349] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9288754] [evidence TAS]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [pmid 9331348] [evidence TAS];  [goid 17154] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [pmid 11112349] [evidence NAS];  [goid 17154] [pmid 11112349] [evidence NAS]	MGC126574; NPN2; NP2; VEGF165R2; PRO2714	MGC126574; NPN2; VEGF165R2; NP2; PRO2714
Homo sapiens	RefSeq	NM_001029896.1	ILMN_25756	WDR45	NM_007075.3	NM_007075.3		11152	71483644	NM_007075.3	WDR45	NP_009006.2	ILMN_1756146	0000050592	A	1670	AAGAGCTCACTTCCCCCCAGCACTTCTTGATGACTGTGTGCCCCAAGGGC	X	-	48932267-48932316	Xp11.23c	Homo sapiens WD repeat domain 45 (WDR45), transcript variant 1, mRNA.				JM5; WDRX1; WIPI-4; WIPI4	JM5; WIPI4; WDRX1; WIPI-4
Homo sapiens	RefSeq	NM_007075.3	ILMN_25756	WDR45	NM_007075.3	NM_007075.3		11152	71483644	NM_007075.3	WDR45	NP_009006.2	ILMN_1692255	0000510048	I	31	GTTCGCCCGTGAAGGGGCAGGACAGGGTGCGCGCTGGTGGAGGTTGAAAT	X	-	48957484-48957492:48957988-48958028	Xp11.23c	Homo sapiens WD repeat domain 45 (WDR45), transcript variant 1, mRNA.				JM5; WDRX1; WIPI-4; WIPI4	JM5; WIPI4; WDRX1; WIPI-4
Homo sapiens	RefSeq	NM_032881.1	ILMN_14450	LSM10	NM_032881.1	NM_032881.1		84967	14249631	NM_032881.1	LSM10	NP_116270.1	ILMN_1751803	0000160255	S	452	TCCATCGGGTGCGAAACTTTGGTGGCAAGGGCCAAGGCCGGTGGGAATTT	1	-	36859379-36859428	1p34.3d	Homo sapiens LSM10, U7 small nuclear RNA associated (LSM10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	MST074; MSTP074; MGC15749	MST074; MSTP074; MGC15749
Homo sapiens	RefSeq	NM_001018011.1	ILMN_12714	ZBTB16	NM_001018011.1	NM_001018011.1		7704	66932931	NM_001018011.1	ZBTB16	NP_001018011.1	ILMN_2402817	0001240474	A	1913	TTTGAGTGTAAGCTCTGCCACCAGCGCTCCCGGGACTACTCGGCCATGAT	11	+	113626269-113626318	11q23.2a	Homo sapiens zinc finger and BTB domain containing 16 (ZBTB16), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9294197] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9294197] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 8541544] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [pmid 12802276] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [evidence IEA]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [pmid 8541544] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9294197] [evidence NAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8541544] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]; The process by which the anatomical structures of leg are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands [goid 35110] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [pmid 8541544] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 12802276] [evidence IDA]; The self-renewing division of a germline stem cell in the male gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the male gametes [goid 48133] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9294197] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12802276] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8622986] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PLZF; ZNF145	PLZF; ZNF145
Homo sapiens	RefSeq	NM_020156.1	ILMN_20257	C1GALT1	NM_020156.1	NM_020156.1		56913	9910143	NM_020156.1	C1GALT1	NP_064541.1	ILMN_1662578	0000580066	S	1401	TGGCCAGGTAGAGGAACTAGAAAAGAGATTTTGTTGCCTGTTTTCTGACC	7	+	7250130-7250179	7p21.3e	Homo sapiens core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 (C1GALT1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11677243] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 17228361] [evidence IMP]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [pmid 17228361] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the addition of a galactosyl residue to a non-reducing O-linked N-acetylgalactosamine residue in an O-glycan [goid 16263] [pmid 11677243] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	T-synthase; C1GALT	T-synthase; C1GALT
Homo sapiens	RefSeq	NM_002139.2	ILMN_11671	RBMX	NM_002139.2	NM_002139.2		27316	56699408	NM_002139.2	RBMX	NP_002130.2	ILMN_2124951	0006180537	S	1285	CCTCCACGTGATTCCTACAGCAGTTCAAGCCGCGGAGCACCAAGAGGTGG	X	-	135784018-135784067	Xq26.3c	Homo sapiens RNA binding motif protein, X-linked (RBMX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 7692398] [evidence NAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7692398] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	RBMXRT; HNRPG; hnRNP-G; RNMX; RBMXP1	RBMXRT; HNRPG; hnRNP-G; RNMX; RBMXP1
Homo sapiens	RefSeq	XR_040922.1	ILMN_350646	PATL2	XR_040922.1	XR_040922.1		197135	169208982	XR_040922.1	PATL2		ILMN_3229046	0004040367	A	1199	TCCAAGGACTTCAGGGATTAACGCTGTTGCCACCTGGCTCCTCAGAGCGG				15q21.1a	PREDICTED: Homo sapiens misc_RNA (PATL2), miscRNA.					
Homo sapiens	Unigene	Hs.573320	ILMN_125501	HS.573320	Hs.573320		Hs.573320		23713561	BU754552			ILMN_1913786	0003400653	S	388	CAGGAGCTTGACTGGCATGCACGGCCCTAACCAGCACACATAACAAACCC	7	-	113654431-113654480		UI-1-BB1p-ayd-g-01-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-ayd-g-01-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.544465	ILMN_107872	HS.544465	Hs.544465		Hs.544465		13705599	BG183912			ILMN_1866706	0002030369	S	206	CAGTTCCCAATCCATAGTACAGATGATCCCTGATTTACTATGGGTCAATG	6	+	115837837-115837886		RST2825 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_945851.1	ILMN_38244	USP22	XM_945851.1	XM_945851.1		23326	89042521	XM_945851.1	USP22	XP_950944.1	ILMN_1750886	0001070433	I	155	TCACTGTGACAAAGGGCACAGCGGGGAAGGGATGTGGGAACGGCTTCCAC				17p11.2b	PREDICTED: Homo sapiens ubiquitin specific peptidase 22, transcript variant 5 (USP22), mRNA.	A large multiprotein complex that possesses histone acetyltransferase activity and is involved in regulation of transcription. The budding yeast complex includes Gcn5p, several proteins of the Spt and Ada families, and several TBP-associate proteins (TAFs); analogous complexes in other species have analogous compositions, and usually contain homologs of the yeast proteins [goid 124] [pmid 18206973] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18206973] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 16378762] [evidence NAS]; The modification of histones by removal of ubiquitin groups [goid 16578] [pmid 18206973] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [pmid 18206973] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 18206973] [evidence IMP]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H4 [goid 10485] [pmid 18206973] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XR_039157.1	ILMN_334867	LOC100130441	XR_039157.1	XR_039157.1		100130441	169218310	XR_039157.1	LOC100130441		ILMN_3176532	0004890356	A	38	ACTCAAACTCCCGGGCTCAAGTGATTCTTCTGCCTCAGCCTCCTGAGAGC				4p16.2b	PREDICTED: Homo sapiens misc_RNA (LOC100130441), miscRNA.					
Homo sapiens	RefSeq	NM_022104.3	ILMN_10564	PCIF1	NM_022104.3	NM_022104.3		63935	41327716	NM_022104.3	PCIF1	NP_071387.1	ILMN_2232368	0003890139	S	2389	GCCGTGAGCAGGGTCCTAGCCGCGAGCCTCACCCCACTTAACATATCCTG	20	+	44009761-44009801:44009802-44009810	20q13.12b	Homo sapiens PDX1 C-terminal inhibiting factor 1 (PCIF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCIF1	PCIF1
Homo sapiens	RefSeq	NM_182740.1	ILMN_165459	PKD1L2	NM_052892.3	NM_052892.3		114780	116006950	NM_052892.3	PKD1L2	NP_443124.3	ILMN_1742788	0007200747	A	7424	GGCCTCGGGCGTACGCTTACCAGCGACTCTATAGTCTCTCTAGGTCATAG	16	-	81134633-81134682	16q23.2b	Homo sapiens polycystic kidney disease 1-like 2 (PKD1L2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	FLJ45333; DKFZp686J19100	FLJ45333; DKFZp686J19100
Homo sapiens	RefSeq	NM_052892.2	ILMN_165459	PKD1L2	NM_052892.3	NM_052892.3		114780	116006950	NM_052892.3	PKD1L2	NP_443124.3	ILMN_1735534	0005130541	I	5554	TCCCTCAGGTGGCTCATCTCCATGGCTGTCTCCTTCGTGGAGAGCATGTT	16	-	81173131-81173180	16q23.2b	Homo sapiens polycystic kidney disease 1-like 2 (PKD1L2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	FLJ45333; DKFZp686J19100	FLJ45333; DKFZp686J19100
Homo sapiens	RefSeq	NM_005423.3	ILMN_4028	TFF2	NM_005423.3	NM_005423.3		7032	48928025	NM_005423.3	TFF2	NP_005414.1	ILMN_1663919	0004040632	S	252	CACCCCCTCCCAAAGCAAGAGTCGGATCAGTGCGTCATGGAGGTCTCAGA	21	-	42640779-42640810:42643059-42643076	21q22.3b	Homo sapiens trefoil factor 2 (spasmolytic protein 1) (TFF2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 9043862] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 8836141] [evidence TAS]		SP; SML1	SP; SML1
Homo sapiens	RefSeq	XM_001726076.1	ILMN_337315	LOC100128853	XM_001726076.1	XM_001726076.1		100128853	169214280	XM_001726076.1	LOC100128853	XP_001726128.1	ILMN_3255668	0006900678	M	338	GGTCCTCAAACCTAACTAAACATAAGAGGATGCACGCTGGAGAGAAACCC				19p12b	PREDICTED: Homo sapiens similar to hCG36768 (LOC100128853), mRNA.					
Homo sapiens	Unigene	Hs.334275	ILMN_86541	HS.334275	Hs.334275		Hs.334275		13750134	BG461628			ILMN_1855198	0002900671	S	453	GCCTTTTATCCGCCACCACCAGCGGAGAGATCAGTGAGAGGAGATGAGTG	11	+	96635746-96635783:96635786-96635797		RST44510 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_016456.2	ILMN_3989	TMEM9	NM_016456.2	NM_016456.2		252839	24308523	NM_016456.2	TMEM9	NP_057540.1	ILMN_1686748	0001010110	S	1281	CATGGAGTGCCCATGCATACTCTGCTGCCGGTCCCCTCACCTGCACTTGA	1	-	199370719-199370768	1q32.1b	Homo sapiens transmembrane protein 9 (TMEM9), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TMEM9A	TMEM9A
Homo sapiens	Unigene	Hs.362343	ILMN_87507	HS.362343	Hs.362343		Hs.362343		34529363	AK123745			ILMN_1831834	0000070128	S	1642	CCCCTCAAGGATTCTGTGATTCTAATGTAACAAGGTACACACGCTCTCTC	1	-	215667140-215667189		Homo sapiens cDNA FLJ41751 fis, clone HSYRA2008154					
Homo sapiens	RefSeq	NM_181502.1	ILMN_13635	SPINLW1	NM_181502.1	NM_181502.1		57119	31563527	NM_181502.1	SPINLW1	NP_852479.1	ILMN_1794266	0004230465	I	470	CCCTGAGGAAAAGAACTCCTGGGGGCAAGCAAACTGAAAGCAAACTTCCC	20	-	44174497-44174546	20q13.12b	Homo sapiens serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin) (SPINLW1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	EPPIN; dJ461P17.2; EPPIN2; EPPIN3; WAP7; WFDC7; EPPIN1	EPPIN; dJ461P17.2; EPPIN2; EPPIN3; WAP7; WFDC7; EPPIN1
Homo sapiens	RefSeq	NM_006590.2	ILMN_24300	USP39	NM_006590.2	NM_006590.2		10713	56550050	NM_006590.2	USP39	NP_006581.2	ILMN_1659523	0006020487	S	1882	CCCACTTGCCTGGGATGGCCCCACACTGTCACTCAGCTGTTCTTTGATCA	2	+	85729590-85729639	2p11.2f	Homo sapiens ubiquitin specific peptidase 39 (USP39), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 10022888] [evidence TAS]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 10022888] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 10022888] [evidence TAS]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SAD1; HSPC332; CGI-21; MGC75069	SAD1; MGC75069; HSPC332; CGI-21
Homo sapiens	RefSeq	NM_182944.1	ILMN_27806	NIN	NM_182944.1	NM_182944.1		51199	33946316	NM_182944.1	NIN	NP_891989.1	ILMN_2256106	0002190632	I	6565	TGTAGTCTATATATTTTCTCATTCCATATGTTGTAACTATTTTTAACCAA	14	-	50263823-50263872	14q22.1b-q22.1c	Homo sapiens ninein (GSK3B interacting protein) (NIN), transcript variant 1, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 12927815] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process by which a centrosome is transported to, and/or maintained in, a specific location within the cell [goid 51642] [pmid 16154161] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15147888] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA1565	KIAA1565
Homo sapiens	RefSeq	NM_021046.2	ILMN_20386	KRTAP5-8	NM_021046.2	NM_021046.2		57830	123173776	NM_021046.2	KRTAP5-8	NP_066384.2	ILMN_2197990	0001050397	S	257	TCCAAGGGAGGCTGTGGTTCTTGTGGCTGCTCCCAGTGCAGCTGCTATAA	11	+	70926975-70927024	11q13.4a	Homo sapiens keratin associated protein 5-8 (KRTAP5-8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of an epidermal cutaneous structure [goid 30280] [pmid 10023043] [evidence NAS]	KRTAP5-2; UHSKerB; KRTAP5.8	KRTAP5-2; UHSKerB; KRTAP5.8
Homo sapiens	RefSeq	NM_181527.1	ILMN_43091	NAT5	NM_181527.2	NM_181527.2		51126	89993685	NM_181527.2	NAT5	NP_852668.1	ILMN_1692169	0004390692	I	29	GCAGCTGTTGGGATGTGTACATCGTGAAGCCCACCTGGTGGCCGTGGTTA	20	+	19946571-19946620	20p11.23b	Homo sapiens N-acetyltransferase 5 (GCN5-related, putative) (NAT5), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ1002M8.1; NAT3	ARD1; dJ1002M8.1
Homo sapiens	RefSeq	NM_001003927.1	ILMN_29280	EVI2A	NM_001003927.1	NM_001003927.1		2123	51511748	NM_001003927.1	EVI2A	NP_001003927.1	ILMN_1662747	0006100474	I	262	CAAAAGCCTGACTAGCAGTGGCATCCATGTTGCTTAGGAGTTGGTTTGGA	17	-	26671551-26671575:26671576-26671600	17q11.2d	Homo sapiens ecotropic viral integration site 2A (EVI2A), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 2117566] [evidence NAS]	EVDA; EVI2	EVDA; EVI2
Homo sapiens	RefSeq	XM_942932.1	ILMN_33151	LOC648394	XM_942932.1	XM_942932.1		648394	89066726	XM_942932.1	LOC648394	XP_948025.1	ILMN_1698047	0003460452	I	1099	TGGCTATAACGTACAGCAACCCTGTGTCGGTGCCCCCTGCCCGCTTCTCT					PREDICTED: Homo sapiens similar to sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3, transcript variant 2 (LOC648394), mRNA.					
Homo sapiens	RefSeq	NR_002332.1	ILMN_366212	ST7OT3	NR_002332.1	NR_002332.1		93655	194440730	NR_002332.1	ST7OT3		ILMN_3246810	0002600575	S	712	CCCTTCAGGCCTCCAGATTTGAGGGGAGGCTCTAGCATGTTCTGGCTGCA	7	+	116838506-116838555		Homo sapiens ST7 overlapping transcript 3 (non-protein coding) (ST7OT3), non-coding RNA.					
Homo sapiens	RefSeq	NM_007006.2	ILMN_8504	NUDT21	NM_007006.2	NM_007006.2		11051	59889569	NM_007006.2	NUDT21	NP_008937.1	ILMN_2133146	0000610736	S	3917	CTGGACTCATTTCAAGCAGTTTGCTTTTGTTCAAATCGTGATGAGAAACC	16	-	56463488-56463537	16q13a	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 21 (NUDT21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 11256614] [evidence IDA]; Discrete subnuclear bodies in the interchromatin nucleoplasmic space, often located adjacent to nuclear specks. 10-20 paraspeckles are typically found in human cell nuclei [goid 42382] [pmid 15169763] [evidence IDA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8626397] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15169763] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11716503] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14561889] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp686H1588; CPSF5; CFIM25	DKFZp686H1588; CPSF5; CFIM25
Homo sapiens	RefSeq	NM_007006.2	ILMN_8504	NUDT21	NM_007006.2	NM_007006.2		11051	59889569	NM_007006.2	NUDT21	NP_008937.1	ILMN_1798886	0003170446	S	3660	ACTTGTTCAGTCACTTGAGATGAAATGCTTGGGGTAGCTTTTCCATCCTC	16	-	56463745-56463794	16q13a	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 21 (NUDT21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 11256614] [evidence IDA]; Discrete subnuclear bodies in the interchromatin nucleoplasmic space, often located adjacent to nuclear specks. 10-20 paraspeckles are typically found in human cell nuclei [goid 42382] [pmid 15169763] [evidence IDA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8626397] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15169763] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11716503] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14561889] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp686H1588; CPSF5; CFIM25	DKFZp686H1588; CPSF5; CFIM25
Homo sapiens	RefSeq	XM_942328.1	ILMN_32033	LOC652710	XM_942328.1	XM_942328.1		652710	89063907	XM_942328.1	LOC652710	XP_947421.1	ILMN_1806868	0005560437	S	1462	GTGTGTGAGGATCTGGAGCTCAGGAGGGATTCAGGCTCAGCAGGGACTCA					PREDICTED: Homo sapiens similar to Voltage-dependent L-type calcium channel alpha-1C subunit (Voltage-gated calcium channel alpha subunit Cav1.2) (Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle) (LOC652710), mRNA.					
Homo sapiens	Unigene	Hs.481659	ILMN_95839	HS.481659	Hs.481659		Hs.481659		34527565	AK130706			ILMN_1854765	0004730154	S	1667	CACGGCACCTCCGCCTTTGTGAACTGTCATTGGCCACTCTGCAAATCCTG	5	+	14756083-14756132		Homo sapiens cDNA FLJ27196 fis, clone SYN02831					
Homo sapiens	RefSeq	NM_198317.1	ILMN_30075	KLHL17	NM_198317.1	NM_198317.1		339451	38194228	NM_198317.1	KLHL17	NP_938073.1	ILMN_1749751	0006450706	I	36	AGCCCTCCGGCAGTCTCCGCGTCCGTTAAGCCCGCGGGTCCTCCGCGAAT	1	+	885865-885914	1p36.33b	Homo sapiens kelch-like 17 (Drosophila) (KLHL17), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP11-54O7.6	RP11-54O7.6
Homo sapiens	RefSeq	XM_936706.1	ILMN_30075	KLHL17	NM_198317.1	NM_198317.1		339451	38194228	NM_198317.1	KLHL17	NP_938073.1	ILMN_1705602	0003850504	A	2203	AGTGCCACGGCTGCCCGTTTACACCTTTAGCGTCTGGTCCTCCTGCGTGT	1	+	890601-890650	1p36.33b	Homo sapiens kelch-like 17 (Drosophila) (KLHL17), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP11-54O7.6	
Homo sapiens	RefSeq	NM_020194.4	ILMN_23814	MFF	NM_020194.4	NM_020194.4		56947	31377606	NM_020194.4	MFF	NP_064579.3	ILMN_1680171	0003890348	S	1469	TCTGTCACTCAGCTGTATTCACGTCTGAGCAGTTCTGCAGTAACACCTGC	2	+	227930251-227930300	2q36.3c	Homo sapiens mitochondrial fission factor (MFF), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC110913; GL004; DKFZp666J168	MGC110913; GL004; DKFZp666J168
Homo sapiens	RefSeq	XM_930362.1	ILMN_38273	LOC647297	XM_930362.1	XM_930362.1		647297	88953284	XM_930362.1	LOC647297	XP_935455.1	ILMN_1715709	0006770092	S	74	AAGCTATAGTGGATCAGACCGGCAGCAGACCACCAAACAACGGACCATAA	2	+	83747999-83748048		PREDICTED: Homo sapiens hypothetical protein LOC647297 (LOC647297), mRNA.					
Homo sapiens	Unigene	Hs.569985	ILMN_122166	HS.569985	Hs.569985		Hs.569985		34526664	AK129956			ILMN_1848863	0006280075	S	1116	TAAAGAGAAAGACCCAGGACCCTCCCCCATCACCCCCAAGAGAGGTTCGC	19	+	3415718-3415767		Homo sapiens cDNA FLJ26446 fis, clone KDN02743					
Homo sapiens	RefSeq	NM_024827.1	ILMN_26127	HDAC11	NM_024827.1	NM_024827.1		79885	13376227	NM_024827.1	HDAC11	NP_079103.1	ILMN_1684690	0004220669	S	1659	GGGGTACAGGTGGGTTCCCTCATCTGGAGTTCCCCCTCAATAAAGCAAGG	3	+	13521774-13521823	3p25.1c	Homo sapiens histone deacetylase 11 (HDAC11), mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 11948178] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11948178] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12711221] [evidence TAS]; The modification of histones by removal of acetyl groups [goid 16575] [pmid 11948178] [evidence IDA]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 11948178] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ22237	FLJ22237
Homo sapiens	RefSeq	NM_014911.2	ILMN_168875	AAK1	NM_014911.2	NM_014911.2		22848	29570779	NM_014911.2	AAK1	NP_055726.2	ILMN_1689211	0006860170	S	2914	TAGTTAACCAATCCCTGGGGAATAGCCCTGCCACCCCAGAAGCCAAGGCT	2	-	69563227-69563276	2p14a	Homo sapiens AP2 associated kinase 1 (AAK1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA1048; MGC138170	KIAA1048
Homo sapiens	RefSeq	NM_006421.3	ILMN_164295	ARFGEF1	NM_006421.3	NM_006421.3		10565	51479144	NM_006421.3	ARFGEF1	NP_006412.2	ILMN_2221408	0003710681	S	6943	CTGGCATGGTTTGCGGAGGTTAGATTTACTGGAAATGTATTCATACTGTG	8	-	68272670-68272719	8q13.2a	Homo sapiens ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) (ARFGEF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 10212200] [evidence TAS]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [pmid 15644318] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [pmid 15644318] [evidence IPI]	DKFZP434L057; BIG1; ARFGEP1; P200; D730028O18Rik	DKFZP434L057; BIG1; ARFGEP1; P200; D730028O18Rik
Homo sapiens	RefSeq	NM_006421.3	ILMN_164295	ARFGEF1	NM_006421.3	NM_006421.3		10565	51479144	NM_006421.3	ARFGEF1	NP_006412.2	ILMN_1728471	0006100524	S	6665	GGCTGTAACATGCCCAGAAGCTGTTGTGGCCGACACTTCAACAATAGGGA	8	-	68272948-68272997	8q13.2a	Homo sapiens ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) (ARFGEF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 10212200] [evidence TAS]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [pmid 15644318] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [pmid 15644318] [evidence IPI]	DKFZP434L057; BIG1; ARFGEP1; P200; D730028O18Rik	DKFZP434L057; BIG1; ARFGEP1; P200; D730028O18Rik
Homo sapiens	RefSeq	XM_942109.1	ILMN_36774	LOC652588	XM_942109.1	XM_942109.1		652588	88955217	XM_942109.1	LOC652588	XP_947202.1	ILMN_1716649	0004290343	S	61	GCAGGTTTCCTAACAGAGAATCCAAATCTAAGGAGGGAACACACATGTTT					PREDICTED: Homo sapiens hypothetical protein LOC652588 (LOC652588), mRNA.					
Homo sapiens	RefSeq	NM_016839.2	ILMN_162138	RBMS1	NM_016839.2	NM_016839.2		5937	46249391	NM_016839.2	RBMS1	NP_058523.1	ILMN_1656436	0005890390	I	561	TGTTAGTGGGATGGCAAACACTGTGAACATTGCTGTTTCTAGTGGGCCAG	2	-	160997130-160997179	2q24.2b	Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 7838710] [evidence TAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8041632] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 7838710] [evidence TAS]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 7838710] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8041632] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10869558] [evidence IPI]	MGC3331; MSSP-1; MSSP; YC1; SCR2; MSSP-3; MGC15146; MSSP-2	MGC3331; MSSP-1; MSSP; YC1; SCR2; MSSP-3; MGC15146; MSSP-2
Homo sapiens	RefSeq	NM_002041.3	ILMN_18311	GABPB2	NM_002041.3	NM_002041.3		2553	68215813	NM_002041.3	GABPB2	NP_002032.2	ILMN_2331701	0001690215	A	1145	CCAGCAACAGACATTGCTGAAGAAACTGTTATAAGTGAAGAACCACCAGC	15	-	48365611-48365660	15q21.2a	Homo sapiens GA binding protein transcription factor, beta subunit 2 (GABPB2), transcript variant gamma-1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		NRF2B2; GABPB; E4TF1-47; E4TF1; BABPB2; NRF2B1; GABPB1; E4TF1B; E4TF1-53	NRF2B2; GABPB; E4TF1-47; E4TF1; NRF2B1; E4TF1B; E4TF1-53; BABPB2; GABPB1
Homo sapiens	RefSeq	XM_001713998.1	ILMN_341107	LOC100130116	XM_001713998.1	XM_001713998.1		100130116	169211681	XM_001713998.1	LOC100130116	XP_001714050.1	ILMN_3260148	0004810360	M	808	GCACAAGCACACACCCAGGGCACAGGTACACACAAGCTACTGGGACATAC				17p11.2e	PREDICTED: Homo sapiens hypothetical LOC100130116 (LOC100130116), mRNA.					
Homo sapiens	RefSeq	NM_032750.1	ILMN_24812	ABHD14B	NM_032750.1	NM_032750.1		84836	14249381	NM_032750.1	ABHD14B	NP_116139.1	ILMN_2227533	0000150064	S	1558	CAGGAGGCCCTTTTGCAAGGCTTAGGGTGTGGCCAGCCCTGAAAGCTACT	3	-	51977779-51977828	3p21.1e	Homo sapiens abhydrolase domain containing 14B (ABHD14B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CIB; MGC15429	CIB; MGC15429
Homo sapiens	RefSeq	XM_928088.1	ILMN_43079	LOC645029	XM_928088.1	XM_928088.1		645029	88984943	XM_928088.1	LOC645029	XP_933181.1	ILMN_1734039	0000730400	S	229	GTGAAGCCCAAAGTCTTCCACAGCACCCCATACCAGAGAATGCTGCTCCC	5	-	131466559-131466597:131511083-131511093		PREDICTED: Homo sapiens similar to Prolyl 4-hydroxylase alpha-2 subunit precursor (4-PH alpha-2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-2 subunit) (LOC645029), mRNA.					
Homo sapiens	RefSeq	XM_001717251.1	ILMN_347922	LOC100132000	XM_001717251.1	XM_001717251.1		100132000	169167604	XM_001717251.1	LOC100132000	XP_001717303.1	ILMN_3290635	0002350100	M	478	AGAGATGGCCTTACCCTGGCAGTAACTCTTAATCAGAAAGACCCCAAGGC	5	-	37274817-37274819:37275572-37275618	5p13.2b	PREDICTED: Homo sapiens similar to mCG141110 (LOC100132000), mRNA.					
Homo sapiens	RefSeq	NM_003337.2	ILMN_19013	UBE2B	NM_003337.2	NM_003337.2		7320	32967281	NM_003337.2	UBE2B	NP_003328.1	ILMN_1663099	0006960619	S	2564	TCACTCACTGGAATCGTGGCTCCCAAAAAGATGCTTTAATTGTGTGGTGC	5	+	133727732-133727781	5q31.1e	Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog) (UBE2B), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Pathways for DNA repair which occur after DNA has replicated, e.g. mismatch repair, and which involve translesion synthesis (TLS-type) DNA polymerases [goid 6301] [pmid 1559696] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 1559696] [evidence TAS]; The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement [goid 7288] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	RAD6B; E2-17kDa; UBC2; HHR6B; HR6B	RAD6B; E2-17kDa; UBC2; HHR6B; HR6B
Homo sapiens	RefSeq	XM_940755.1	ILMN_38256	LOC651581	XM_940755.2	XM_940755.2		651581	113430874	XM_940755.2	LOC651581	XP_945848.2	ILMN_1674437	0005050730	S	1170	CTCTGTGTGGATACTGTGGGGCATATTATTTCCACCCCCAACACCGGCTG					PREDICTED: Homo sapiens similar to deleted in malignant brain tumors 1 isoform c precursor (LOC651581), mRNA.					
Homo sapiens	RefSeq	NM_002442.2	ILMN_165735	MSI1	NM_002442.2	NM_002442.2		4440	25121990	NM_002442.2	MSI1	NP_002433.1	ILMN_1739601	0007200725	S	2687	CGTTTGAGCTGAGTCCTGAGACACTTAGCTTCCCTCTCCCTCATTCCCGG	12	-	120779346-120779395	12q24.31a	Homo sapiens musashi homolog 1 (Drosophila) (MSI1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9790759] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [evidence IEA]		
Homo sapiens	RefSeq	NM_013936.2	ILMN_18808	OR12D2	NM_013936.2	NM_013936.2		26529	21450849	NM_013936.2	OR12D2	NP_039224.2	ILMN_1771488	0001990682	S	574	CTTAATCAGTGGCTACTCAGTACTGTCACGGGGACAATTGCCATGGGCCC	6	+	29473029-29473078	6p22.1a	Homo sapiens olfactory receptor, family 12, subfamily D, member 2 (OR12D2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	MGC126791; dJ994E9.8; hs6M1-20; MGC126795	MGC126791; dJ994E9.8; hs6M1-20; MGC126795
Homo sapiens	RefSeq	NM_182494.1	ILMN_19195	FAM26A	NM_182494.1	NM_182494.1		119395	32698827	NM_182494.1	FAM26A	NP_872300.1	ILMN_1661022	0006180450	S	1461	CACCGAGGGCCTTGTTAAATACAGGTTCAGACAGTGTAGCCAGGACCGAG	10	-	105222692-105222741	10q24.33a	Homo sapiens family with sequence similarity 26, member A (FAM26A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			bA225H22.7	bA225H22.7
Homo sapiens	Unigene	Hs.538762	ILMN_104104	HS.538762	Hs.538762		Hs.538762		5547475	AI873426			ILMN_1843303	0004860576	S	150	CTTCTGCACTGTCTTGTTTCTCCTCATTGGACCTGAGACTTCGCTCGGCA	11	+	114908399-114908448		wf82f02.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2362107 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001010969.2	ILMN_25929	CYP4A22	NM_001010969.2	NM_001010969.2		284541	62952505	NM_001010969.2	CYP4A22	NP_001010969.2	ILMN_1726980	0003850044	S	745	ATGAGGAATGCCTTTCATGAGAATGACACCATCTACAGCCTGACCTCTGC	1	+	47382079-47382128	1p33d	Homo sapiens cytochrome P450, family 4, subfamily A, polypeptide 22 (CYP4A22), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: octane + reduced rubredoxin + O2 = 1-octanol + oxidized rubredoxin + H2O [goid 18685] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001010969.2	ILMN_25929	CYP4A22	NM_001010969.2	NM_001010969.2		284541	62952505	NM_001010969.2	CYP4A22	NP_001010969.2	ILMN_2059780	0005690368	S	1415	GGAACTGCATCGGGAAACAATTTGCCATGAACCAGCTGAAGGTGGCCAGG	1	+	47384412-47384412:47386861-47386909	1p33d	Homo sapiens cytochrome P450, family 4, subfamily A, polypeptide 22 (CYP4A22), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: octane + reduced rubredoxin + O2 = 1-octanol + oxidized rubredoxin + H2O [goid 18685] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_138348.3	ILMN_13657	FAM105B	NM_138348.4	NM_138348.4		90268	115334674	NM_138348.4	FAM105B	NP_612357.4	ILMN_1790062	0001070253	S	2587	GGCAGCCCCTGAATTGGCTCAACGTTTGTGGAGGTGGTATTTCCCTGAAG	5	+	14694533-14694582	5p15.2a	Homo sapiens family with sequence similarity 105, member B (FAM105B), mRNA.				FLJ34884	FLJ34884
Homo sapiens	RefSeq	NM_001010000.1	ILMN_177416	ARHGAP28	NM_001010000.1	NM_001010000.1		79822	59710112	NM_001010000.1	ARHGAP28	NP_001010000.1	ILMN_2290204	0000510575	I	5019	GGCATTTTCATCTGCTGTCCACGTATTTCACTTGACTGAAAGCTCATATG	18	+	6903492-6903541	18p11.31a	Homo sapiens Rho GTPase activating protein 28 (ARHGAP28), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	FLJ10312; DKFZp686A2038	FLJ10312; DKFZp686A2038
Homo sapiens	RefSeq	NM_020650.2	ILMN_7768	RCN3	NM_020650.2	NM_020650.2		57333	28626509	NM_020650.2	RCN3	NP_065701.2	ILMN_1809850	0002100431	S	1746	TGAGCCTCCACCACATAGACTGAAACTCCCCTGGCCCCAGCCCTCTCCTG	19	+	50046782-50046831	19q13.33b	Homo sapiens reticulocalbin 3, EF-hand calcium binding domain (RCN3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	RLP49	RLP49
Homo sapiens	RefSeq	NM_001002256.1	ILMN_28055	ATP5G3	NM_001002258.4	NM_001002258.4		518	149999602	NM_001002258.4	ATP5G3	NP_001002258.1	ILMN_1770466	0006220541	A	898	GCATTCAGGCAGATGCTGTCCCATTCAGAGGAAGCTACAGCAGTTGCTCC	2	-	176042767-176042816	2q31.1g	Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) (ATP5G3), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 7698763] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 7698763] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	MGC125738; P3	MGC125738
Homo sapiens	RefSeq	NM_018386.1	ILMN_29144	PCID2	NM_018386.1	NM_018386.1		55795	8922986	NM_018386.1	PCID2	NP_060856.1	ILMN_1788024	0000730541	S	1470	GCGTGAAGGCTGCTCGGCTCACTTTTCCTAAGTGTGGTTCCTGAAGGCTG	13	-	112880193-112880242	13q34c-q34d	Homo sapiens PCI domain containing 2 (PCID2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC16774; FLJ11305; F10; RP11-98F14.6	MGC16774; FLJ11305; F10; RP11-98F14.6
Homo sapiens	RefSeq	XM_944680.2	ILMN_37483	LOC643153	XM_944680.2	XM_944680.2		643153	113423860	XM_944680.2	LOC643153	XP_949773.2	ILMN_3198581	0004880286	A	48	ATGCAAAGATACATCTCTAGATCAGTTAAACACATGGGATAAGTTAGGTC				12q21.33b	PREDICTED: Homo sapiens hypothetical LOC643153 (LOC643153), mRNA.					
Homo sapiens	RefSeq	XM_944680.2	ILMN_37483	LOC643153	XM_944680.2	XM_944680.2		643153	113423860	XM_944680.2	LOC643153	XP_949773.2	ILMN_3275056	0001170634	M	271	GTAATGTGAACAGTTATTTCTATATTGCTTTCACCCTTTATTTCCTATTT				12q21.33b	PREDICTED: Homo sapiens hypothetical LOC643153 (LOC643153), mRNA.					
Homo sapiens	RefSeq	XM_927466.1	ILMN_31477	LOC399829	XM_927466.1	XM_927466.1		399829	89031673	XM_927466.1	LOC399829	XP_932559.1	ILMN_1661288	0001400022	A	4948	AATGTGGATGCGTCCTTGGGGGAAAGGTGGGCTCGGGATCCAGGCATAGA	10	+	134639548-134639597	10q26.3f	PREDICTED: Homo sapiens FLJ43861 protein (LOC399829), mRNA.					
Homo sapiens	RefSeq	XM_927341.1	ILMN_44272	LOC644120	XM_927341.1	XM_927341.1		644120	89029944	XM_927341.1	LOC644120	XP_932434.1	ILMN_1755806	0001190133	S	96	GGTGGTGCCCCATGTGAGGAACGCTGCCACGAATTGTGAGAGAACCCTCA	9	-	102170814-102170863		PREDICTED: Homo sapiens hypothetical protein LOC644120 (LOC644120), mRNA.					
Homo sapiens	RefSeq	NM_019103.2	ILMN_13941	ZMAT5	NM_019103.2	NM_019103.2		55954	51173753	NM_019103.2	ZMAT5	NP_061976.1	ILMN_1745421	0006550180	A	441	GGCCAGTGCGACTTTGGCTCCAACTGCAGATTTTCCCACATGTCAGAGCG	22	-	30136670-30136719	22q12.2a	Homo sapiens zinc finger, matrin type 5 (ZMAT5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The minor (U12-dependent) spliceosome is composed of the snRNPs, U11, U12, U4atac, U6atac, and U5 (which is also a component of the major spliceosome). This minor form of the spliceosome is responsible for the splicing of the majority of introns with atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site [goid 5689] [pmid 15146077] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 15146077] [evidence IC ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_019103.2	ILMN_13941	ZMAT5	NM_019103.2	NM_019103.2		55954	51173753	NM_019103.2	ZMAT5	NP_061976.1	ILMN_2337955	0005420068	A	553	ATGCTCCTGAGCTCCCCGAGGGCCATCTGGAGGACTGGCTGGAGAAGAGA	22	-	30134350-30134399	22q12.2a	Homo sapiens zinc finger, matrin type 5 (ZMAT5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The minor (U12-dependent) spliceosome is composed of the snRNPs, U11, U12, U4atac, U6atac, and U5 (which is also a component of the major spliceosome). This minor form of the spliceosome is responsible for the splicing of the majority of introns with atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site [goid 5689] [pmid 15146077] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 15146077] [evidence IC ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_019103.2	ILMN_13941	ZMAT5	NM_019103.2	NM_019103.2		55954	51173753	NM_019103.2	ZMAT5	NP_061976.1	ILMN_1759219	0002510215	I	170	TCCTTGGGCTCAAGCTATCCTCCCACCTCAGCCTCTCAAATAGCTGGGAC	22	-	30150742-30150791	22q12.2a	Homo sapiens zinc finger, matrin type 5 (ZMAT5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The minor (U12-dependent) spliceosome is composed of the snRNPs, U11, U12, U4atac, U6atac, and U5 (which is also a component of the major spliceosome). This minor form of the spliceosome is responsible for the splicing of the majority of introns with atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site [goid 5689] [pmid 15146077] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 15146077] [evidence IC ]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_000820.1	ILMN_10723	GAS6	NM_000820.1	NM_000820.1		2621	4557616	NM_000820.1	GAS6	NP_000811.1	ILMN_1768260	0004570181	I	350	CGAGGAGGCGCGGGAGGTGTTCGAGAACGACCCCGAGACGGATTATTTTT	13	+	113547353-113547395:113562920-113562926	13q34d	Homo sapiens growth arrest-specific 6 (GAS6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7854420] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7854420] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 7854420] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ34709; AXLLG; AXSF; DKFZp666G247	FLJ34709; AXLLG; AXSF; DKFZp666G247
Homo sapiens	RefSeq	NM_000820.1	ILMN_10723	GAS6	NM_000820.1	NM_000820.1		2621	4557616	NM_000820.1	GAS6	NP_000811.1	ILMN_1779558	0000070730	A	2251	GCCATGCTGAGAGCTGGGCTTTCCTCTGTGACCATCCCGGCCTGTAACAT	13	+	113590183-113590232	13q34d	Homo sapiens growth arrest-specific 6 (GAS6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7854420] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7854420] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 7854420] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ34709; AXLLG; AXSF; DKFZp666G247	FLJ34709; AXLLG; AXSF; DKFZp666G247
Homo sapiens	RefSeq	XM_942084.1	ILMN_10723	GAS6	NM_000820.1	NM_000820.1		2621	4557616	NM_000820.1	GAS6	NP_000811.1	ILMN_1784749	0004280632	A	2256	GCTGAGAGCTGGGCTTTCCTCTGTGACCATCCCGGCCTGTAACATATCTG	13	+	113590188-113590237	13q34d	Homo sapiens growth arrest-specific 6 (GAS6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7854420] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7854420] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 7854420] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ34709; AXLLG; AXSF; DKFZp666G247	
Homo sapiens	RefSeq	NM_080646.1	ILMN_27549	TBX1	NM_080646.1	NM_080646.1		6899	18104949	NM_080646.1	TBX1	NP_542377.1	ILMN_2248112	0007560482	I	1195	GAGAGAGAAGTGGAGCTTCTGAGGGATGCAGGTGGCTGTGTGAACCTGGG	22	+	18146799-18146848	22q11.21c	Homo sapiens T-box 1 (TBX1), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15703190] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9268629] [evidence NAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [pmid 14585638] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [pmid 14585638] [evidence IMP]; The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate [goid 60023] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [pmid 14585638] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11111039] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9268629] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11111039] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 11111039] [evidence IDA]	CTHM; VCFS; TGA; TBX1C; DGS; DORV; CAFS; DGCR	VCFS; TGA; DORV; CTHM; TBX1C; DGS; CAFS; DGCR
Homo sapiens	RefSeq	NM_005992.1	ILMN_27549	TBX1	NM_080646.1	NM_080646.1		6899	18104949	NM_080646.1	TBX1	NP_542377.1	ILMN_1708989	0007160445	A	852	CCACGTGGTCTATGTGGACCCACGCAAAGATAGCGAGAAATATGCCGAGG	22	+	18132519-18132568	22q11.21c	Homo sapiens T-box 1 (TBX1), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15703190] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9268629] [evidence NAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [pmid 14585638] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [pmid 14585638] [evidence IMP]; The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate [goid 60023] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [pmid 14585638] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11111039] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9268629] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11111039] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 11111039] [evidence IDA]	CTHM; VCFS; TGA; TBX1C; DGS; DORV; CAFS; DGCR	VCFS; TGA; DORV; CTHM; TBX1C; DGS; CAFS; DGCR
Homo sapiens	RefSeq	XM_932909.1	ILMN_41697	LOC653630	XM_932909.2	XM_932909.2		653630	113413405	XM_932909.2	LOC653630	XP_938002.2	ILMN_1667147	0004040220	S	14	CGACTGGGCTGAATGGCAGGTCCTGACCAAGCCACCCGCGCGGCCCCGCC	2	-	198359668-198359717	2q33.1b	PREDICTED: Homo sapiens hypothetical LOC653630 (LOC653630), mRNA.					
Homo sapiens	RefSeq	NM_182931.1	ILMN_17705	MLL5	NM_182931.1	NM_182931.1		55904	33636767	NM_182931.1	MLL5	NP_891847.1	ILMN_1720491	0002650593	I	7030	TGCAGGAGCCATAGGAAACTACTGAAATGATTGTGCTGGGTAAATTAAGG	7	+	104541935-104541984	7q22.2a	Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) (MLL5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HDCMC04P; MGC70452; FLJ14026; FLJ10078	MGC70452; FLJ14026; FLJ10078; HDCMC04P
Homo sapiens	RefSeq	NM_181714.1	ILMN_9013	LCA5	NM_181714.1	NM_181714.1		167691	32171218	NM_181714.1	LCA5	NP_859065.1	ILMN_2052686	0004250093	S	3180	AGGGCCAGGGGTCCCTATCTTACGTGGCAGTCCTAAGCTACTCTTGAGTG	6	-	80252916-80252965	6q14.1c	Homo sapiens Leber congenital amaurosis 5 (LCA5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		C6orf152	C6orf152
Homo sapiens	RefSeq	NM_005914.2	ILMN_3407	MCM4	NM_005914.2	NM_005914.2		4173	33469918	NM_005914.2	MCM4	NP_005905.2	ILMN_1737205	0006020170	A	2816	AAGGAAGGCTCCCTGCATGTCCTGCTTGCTGCACGCCACATGGGTGTGGT	8	+	48889351-48889400	8q11.21b	Homo sapiens minichromosome maintenance complex component 4 (MCM4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8265339] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10846177] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9465298] [evidence NAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	P1-CDC21; CDC54; MGC33310; CDC21; hCdc21	P1-CDC21; CDC54; MGC33310; CDC21; hCdc21
Homo sapiens	RefSeq	XM_001724645.1	ILMN_343538	LOC100133568	XM_001724645.1	XM_001724645.1		100133568	169218151	XM_001724645.1	LOC100133568	XP_001724697.1	ILMN_3242535	0002600767	S	1	ATCCGCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACC					PREDICTED: Homo sapiens hypothetical protein LOC100133568 (LOC100133568), mRNA.					
Homo sapiens	RefSeq	NM_014693.2	ILMN_175313	ECE2	NM_014693.2	NM_014693.2		9718	41281432	NM_014693.2	ECE2	NP_055508.2	ILMN_2373207	0004810136	A	2827	CCATTCACTGTGACATCTTTCCGTGTCACCCTGCCTGGAAGAGGTCTGGG	3	+	185492929-185492978	3q27.1b	Homo sapiens endothelin converting enzyme 2 (ECE2), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [pmid 11718899] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence ISS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 11718899] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence ISS]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [pmid 11718899] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence ISS]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11718899] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence ISS]	MGC2408; KIAA0604	MGC2408; KIAA0604
Homo sapiens	RefSeq	NM_014693.2	ILMN_175313	ECE2	NM_014693.2	NM_014693.2		9718	41281432	NM_014693.2	ECE2	NP_055508.2	ILMN_2275248	0004230368	I	222	AGTGTGGACTACTCATCAGTCGTGGTGGCTGCCATGCAGGCTCGCCATGC	3	+	185458014-185458046:185458047-185458063	3q27.1b	Homo sapiens endothelin converting enzyme 2 (ECE2), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [pmid 11718899] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence ISS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 11718899] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence ISS]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [pmid 11718899] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence ISS]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11718899] [evidence IDA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence ISS]	MGC2408; KIAA0604	MGC2408; KIAA0604
Homo sapiens	RefSeq	NM_002862.3	ILMN_21544	PYGB	NM_002862.3	NM_002862.3		5834	34577123	NM_002862.3	PYGB	NP_002853.2	ILMN_1778360	0004540326	S	3784	GGGAACAGGCTACTGTCCTTCCCTGTGGAATTGCCGAGAAATCTAGCACC	20	+	25226301-25226350	20p11.21a	Homo sapiens phosphorylase, glycogen; brain (PYGB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10638593] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5980] [pmid 3346228] [evidence NAS]	Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate. The name should be qualified in each instance by adding the name of the natural substrate, e.g. maltodextrin phosphorylase, starch phosphorylase, glycogen phosphorylase [goid 4645] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate [goid 8184] [pmid 3346228] [evidence NAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MGC9213	MGC9213
Homo sapiens	RefSeq	XM_932094.1	ILMN_165699	LOC730357	XM_001131793.1	XM_001131793.1		730357	113419883	XM_001131793.1	LOC730357	XP_001131793.1	ILMN_1692481	0001030072	S	645	CCGCCGTCCTCGCGCGGCTTCCCGGGCGGCTCTGCCCCGACCGTAGACTC					PREDICTED: Homo sapiens hypothetical protein LOC730357 (LOC730357), mRNA.					
Homo sapiens	RefSeq	XM_937648.1	ILMN_41936	LOC648581	XM_937648.2	XM_937648.2		648581	113431116	XM_937648.2	LOC648581	XP_942741.1	ILMN_1708047	0000770487	S	1	ATGGGCCGAGTGGCTCTGAGGGTCCTGTTCCCCGACCGCTACGTCCTACA					PREDICTED: Homo sapiens similar to alveolar soft part sarcoma chromosome region, candidate 1 (LOC648581), mRNA.					
Homo sapiens	RefSeq	XM_929714.1	ILMN_43670	LOC646762	XM_929714.2	XM_929714.2		646762	113418412	XM_929714.2	LOC646762	XP_934807.1	ILMN_1739681	0006290193	S	2773	GTGGCAGTTATCTAAAGGATGCACTGGAGCTGGAGAATTTGCTTCTAGGG	7	-	29653330-29653379	7p15.1c	PREDICTED: Homo sapiens hypothetical protein LOC646762 (LOC646762), mRNA.					
Homo sapiens	RefSeq	NM_005122.2	ILMN_166211	NR1I3	NM_001077469.1	NM_001077469.1		9970	117938728	NM_001077469.1	NR1I3	NP_001070937.1	ILMN_1684106	0000130041	S	1076	GGAGATGGCACTGACTCTGCAAAGCTACATCAAGGGCCAGCAGCGAAGGC	1	-	161200612-161200661	1q23.3a	Homo sapiens nuclear receptor subfamily 1, group I, member 3 (NR1I3), transcript variant 6, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9783588] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8020947] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8114692] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8020947] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9783588] [evidence TAS]; Combining with an androgen to initiate a change in cell activity [goid 4882] [pmid 9783588] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16554032] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MB67; CAR1; CAR; MGC97209; MGC150433; MGC97144	CAR-SV9; CAR-SV12; MB67; CAR1; CAR; CAR-SV8; CAR-SV14; CAR-SV1; CAR-SV7; CAR-SV13; CAR-SV10; CAR-BETA; CAR-SV4; CAR-SV21; CAR-SV6
Homo sapiens	RefSeq	NM_018424.1	ILMN_8980	EPB41L4B	NM_018424.2	NM_018424.2		54566	110624793	NM_018424.2	EPB41L4B	NP_060894.2	ILMN_1784967	0001770278	I	3604	GTGCTGAGTAGAGAGAAGTGGTGGCAGTGGGATTTCCTCAGTAATAGTCC	9	-	112002140-112002189	9q31.3a	Homo sapiens erythrocyte membrane protein band 4.1 like 4B (EPB41L4B), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10783258] [evidence TAS]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 10783258] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	CG1; FLJ21596; EHM2; DKFZp761N1814	CG1; FLJ21596; DKFZp761N1814; EHM2
Homo sapiens	RefSeq	XM_928593.1	ILMN_38808	LOC645576	XM_928593.1	XM_928593.1		645576	89025632	XM_928593.1	LOC645576	XP_933686.1	ILMN_1759282	0004540427	S	310	TGGCCCCCGTGCGTGGAGCCTGGAGCACAGATGTGGTTTCTGGAGCTTTA	7	+	18750-18767:21646-21677		PREDICTED: Homo sapiens similar to Platelet-derived growth factor A chain precursor (PDGF A-chain) (Platelet-derived growth factor alpha polypeptide) (PDGF-1) (LOC645576), mRNA.					
Homo sapiens	RefSeq	NM_001003443.1	ILMN_165826	OR56A3	NM_001003443.2	NM_001003443.2		390083	119120793	NM_001003443.2	OR56A3	NP_001003443.2	ILMN_1719083	0006550202	S	828	GCCAGTCTTGCTCAATGTTCTCCACCATGTCATTCCTGCAGCCCTTAACC	11	+	5925980-5926029	11p15.4c	Homo sapiens olfactory receptor, family 56, subfamily A, member 3 (OR56A3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR56A3P; OR56A2P; OR56A6	OR56A3P; OR56A2P; OR56A6
Homo sapiens	RefSeq	XM_001720862.1	ILMN_342060	LOC100132425	XM_001720862.1	XM_001720862.1		100132425	169191371	XM_001720862.1	LOC100132425	XP_001720914.1	ILMN_3284177	0006100082	M	97	TGTGTGGAGATGGCGACTAGTGGGCAACAGAACAATACTGGAATGGTGGT	10	-	13186623-13186672	10p13e	PREDICTED: Homo sapiens hypothetical protein LOC100132425 (LOC100132425), mRNA.					
Homo sapiens	RefSeq	XR_016021.1	ILMN_179026	LOC729839	XR_016021.1	XR_016021.1		729839	113426749	XR_016021.1	LOC729839		ILMN_3228852	0001430088	A	551	GGACATTTTCTGTAAGAATTCCTTGTTCTGACACCCCCAAACAGGTGCAG	17	-	30758368-30758417	17q12a	PREDICTED: Homo sapiens misc_RNA (LOC729839), miscRNA.					
Homo sapiens	RefSeq	NM_007256.2	ILMN_1897	SLCO2B1	NM_007256.2	NM_007256.2		11309	41152057	NM_007256.2	SLCO2B1	NP_009187.1	ILMN_1761199	0001400121	S	3588	GCTAGTCTTATCTGGCCTGGTTATTTCCTTGCGGGGAGGAGAGGGTTTGC	11	+	74594467-74594516	11q13.4c	Homo sapiens solute carrier organic anion transporter family, member 2B1 (SLCO2B1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other, in a sodium independent manner [goid 15347] [pmid 18501590] [evidence IDA]	KIAA0880; OATPB; SLC21A9; OATP2B1; DKFZp686E0517; OATP-B	KIAA0880; OATPB; SLC21A9; OATP2B1; DKFZp686E0517; OATP-B
Homo sapiens	RefSeq	NM_007256.2	ILMN_1897	SLCO2B1	NM_007256.2	NM_007256.2		11309	41152057	NM_007256.2	SLCO2B1	NP_009187.1	ILMN_2087656	0006580441	S	3781	CTTCTGAGCAGCTCCCAGTGCCAGGGCTTTGAGACTTTCCCACATGATAA	11	+	74594660-74594709	11q13.4c	Homo sapiens solute carrier organic anion transporter family, member 2B1 (SLCO2B1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other, in a sodium independent manner [goid 15347] [pmid 18501590] [evidence IDA]	KIAA0880; OATPB; SLC21A9; OATP2B1; DKFZp686E0517; OATP-B	KIAA0880; OATPB; SLC21A9; OATP2B1; DKFZp686E0517; OATP-B
Homo sapiens	RefSeq	XM_931305.1	ILMN_34731	LOC642616	XM_931305.1	XM_931305.1		642616	89035270	XM_931305.1	LOC642616	XP_936398.1	ILMN_1784597	0000770397	A	1956	CCTACAATGCCCCGACAACTCCCACTAAGACAAAAGAATGATCCAGCCCC	12	+	8340661-8340710		PREDICTED: Homo sapiens hypothetical protein LOC642616, transcript variant 1 (LOC642616), mRNA.					
Homo sapiens	RefSeq	NM_005972.3	ILMN_420	PPYR1	NM_005972.3	NM_005972.3		5540	57527791	NM_005972.3	PPYR1	NP_005963.2	ILMN_1652137	0004120400	S	1818	TGCTGGCAGCAGGCAGGGTTCATTCTGGTGACACAGCAACAGATGCCTGG	10	+	46508188-46508237	10q11.22a	Homo sapiens pancreatic polypeptide receptor 1 (PPYR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8643460] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7592911] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 7592911] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [pmid 7592911] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 7592911] [evidence TAS]	Combining with gut peptide YY to initiate a change in cell activity [goid 1601] [evidence IEA]; Combining with pancreatic polypeptide PP to initiate a change in cell activity [goid 1602] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PP1; MGC116897; NPY4R; NPY4-R; Y4	PP1; MGC116897; NPY4R; NPY4-R; Y4
Homo sapiens	RefSeq	NM_152550.2	ILMN_18847	SH3RF2	NM_152550.2	NM_152550.2		153769	47578102	NM_152550.2	SH3RF2	NP_689763.2	ILMN_1661137	0005570348	S	2918	CCTGGCTGCAAAGGGAGGATTTCTGCGCGGGGTGTGAGGTGGATACTTTG	5	+	145422963-145423012	5q32c	Homo sapiens SH3 domain containing ring finger 2 (SH3RF2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ23654; MGC149789; MGC149788; RNF158; MGC90410	FLJ23654; RNF158; MGC149789; MGC149788; MGC90410
Homo sapiens	RefSeq	NM_144722.2	ILMN_26576	SPEF2	NM_144722.3	NM_144722.3		79925	93277100	NM_144722.3	SPEF2	NP_653323.1	ILMN_1658396	0001990181	I	2164	GACAGACTAGAGCTACATTACTGAAATTGCCAACTACTAACTGTGTGACC	5	+	35670586-35670635	5p13.2c	Homo sapiens sperm flagellar 2 (SPEF2), transcript variant 2, mRNA.			The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	FLJ23164; FLJ23577; MGC102842; KIAA1770; KPL2; FLJ25395	FLJ23164; KIAA1770; FLJ25395
Homo sapiens	RefSeq	NM_144722.2	ILMN_26576	SPEF2	NM_144722.3	NM_144722.3		79925	93277100	NM_144722.3	SPEF2	NP_653323.1	ILMN_1678391	0006980630	A	1552	CTACCTGCTAACCCCTCAAGAGAACAACTTACAGAACTGGAGAAAAGGGA	5	+	35667175-35667224	5p13.2c	Homo sapiens sperm flagellar 2 (SPEF2), transcript variant 2, mRNA.			The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	FLJ23164; FLJ23577; MGC102842; KIAA1770; KPL2; FLJ25395	FLJ23164; KIAA1770; FLJ25395
Homo sapiens	RefSeq	NR_029859.1	ILMN_388162	MIR302D	NR_029859.1	NR_029859.1		442896	262206188	NR_029859.1	MIR302D		ILMN_3310558	0006060008	S	15	GGAGGCACTTGCTGTGACATGACAAAAATAAGTGCTTCCATGTTTGAGTG				4q25f	Homo sapiens microRNA 302d (MIR302D), microRNA.					
Homo sapiens	RefSeq	NR_029637.1	ILMN_388267	MIR223	NR_029637.1	NR_029637.1		407008	262206350	NR_029637.1	MIR223		ILMN_3308936	0001260348	S	58	GTGGTAGAGTGTCAGTTTGTCAAATACCCCAAGTGCGGCACATGCTTACC				Xq12a	Homo sapiens microRNA 223 (MIR223), microRNA.					
Homo sapiens	RefSeq	XM_926378.1	ILMN_161937	LOC728498	XR_015297.1	XR_015297.1		728498	113425171	XR_015297.1	LOC728498		ILMN_1792344	0004920041	A	1012	GGCAGGAGAGCTCCAGGCCCAGGTCAAAAAGAATCAGCGCATAAGTCTCC	15	+	28690340-28690389	15q13.2b	PREDICTED: Homo sapiens hypothetical protein LOC728498 (LOC728498), mRNA.					
Homo sapiens	RefSeq	XM_927044.1	ILMN_161937	LOC728498	XR_015297.1	XR_015297.1		728498	113425171	XR_015297.1	LOC728498		ILMN_1709356	0006860368	S	1272	AAACCTCGGCCCAGAAGGAGCCAGAGGCAGCCAGAGGCCCTGGAGCCCCA	15	+	28690855-28690857:28693055-28693101	15q13.2b	PREDICTED: Homo sapiens hypothetical protein LOC728498 (LOC728498), mRNA.					
Homo sapiens	RefSeq	NM_015475.3	ILMN_16819	FAM98A	NM_015475.3	NM_015475.3		25940	56699481	NM_015475.3	FAM98A	NP_056290.3	ILMN_1735453	0002100161	S	2675	CAAGCTGTGAAAGAAAATGGCTGGAGGTGTGCTTTGTGTGAAAGGTGAGC	2	-	33808749-33808798	2p22.3d	Homo sapiens family with sequence similarity 98, member A (FAM98A), mRNA.				DKFZp686O03192; DKFZP564F0522	DKFZp686O03192; DKFZP564F0522
Homo sapiens	RefSeq	XR_038700.1	ILMN_343932	LOC100132885	XR_038700.1	XR_038700.1		100132885	169162750	XR_038700.1	LOC100132885		ILMN_3242772	0003930091	S	1053	ACAGACTCTCTTCTCCAGCCGGAGCTGGGACTGTTCAGGCACTGGGAGGC	1	+	226226386-226226435	1q42.13b	PREDICTED: Homo sapiens misc_RNA (LOC100132885), miscRNA.					
Homo sapiens	RefSeq	NM_006710.4	ILMN_20467	COPS8	NM_006710.4	NM_006710.4		10920	40805828	NM_006710.4	COPS8	NP_006701.1	ILMN_2373779	0003180020	A	1627	CCCCCACCTCCTGAGAGCCACTAATGTAAGATACAGAAACATAGCTGAGG	2	+	237671597-237671646	2q37.3a	Homo sapiens COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) (COPS8), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8689678] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IEA]			MGC43256; MGC1297; CSN8; COP9; SGN8	MGC43256; MGC1297; CSN8; COP9; SGN8
Homo sapiens	RefSeq	NR_030327.1	ILMN_388052	MIR597	NR_030327.1	NR_030327.1		693182	262205977	NR_030327.1	MIR597		ILMN_3308642	0000770377	S	22	CTCGATGACCACTGTGAAGACAGTAAAATGTACAGTGGTTCTCTTGTGGC				8p23.1c	Homo sapiens microRNA 597 (MIR597), microRNA.					
Homo sapiens	RefSeq	NM_016577.2	ILMN_177099	RAB6B	NM_016577.3	NM_016577.3		51560	96975096	NM_016577.3	RAB6B	NP_057661.3	ILMN_1752299	0004780463	S	5348	TGCATCTCGCGGTGTGTGTCCACTTCTCCCCTCACTTTCCCCTCACCCAT	3	-	135025932-135025981	3q22.1e	Homo sapiens RAB6B, member RAS oncogene family (RAB6B), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10893188] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 10893188] [evidence NAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10893188] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	Unigene	Hs.537638	ILMN_103408	HS.537638	Hs.537638		Hs.537638		4619490	AI610323			ILMN_1867361	0001470577	S	304	CAGGATGTAAAGGGAGGGGAAGTGAACACAGGTACTGCCAAGCCTCAGGG	1	+	224027328-224027377		tp40c11.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:2190260 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006500.2	ILMN_27822	MCAM	NM_006500.2	NM_006500.2		4162	71274106	NM_006500.2	MCAM	NP_006491.2	ILMN_1685275	0001850678	S	3093	GCTCAGGGCCCCAACCCTAGAAGGGCCCAAATGAGAGAATGGTACTTAGG	11	-	119179423-119179472	11q23.3e	Homo sapiens melanoma cell adhesion molecule (MCAM), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8378324] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8378324] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8378324] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MUC18; CD146	CD146; MUC18
Homo sapiens	RefSeq	NM_014395.1	ILMN_24094	DAPP1	NM_014395.1	NM_014395.1		27071	7657006	NM_014395.1	DAPP1	NP_055210.1	ILMN_1664691	0001850220	S	2233	GCTGCAAAGCTATGATATAAACTGCTCTTGCAGTCCAAAGGGATACCTGA	4	+	101009612-101009661	4q23b	Homo sapiens dual adaptor of phosphotyrosine and 3-phosphoinositides (DAPP1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 10432293] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10432293] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 10432293] [evidence NAS]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]	DKFZp667E0716; BAM32	DKFZp667E0716; BAM32
Homo sapiens	RefSeq	NM_014395.1	ILMN_24094	DAPP1	NM_014395.1	NM_014395.1		27071	7657006	NM_014395.1	DAPP1	NP_055210.1	ILMN_2097410	0003460504	S	2673	ACCAAGATCGCGGCGCTGCACTCTAGCCTGGGTGACAGAGTCAGACTCCG	4	+	101010052-101010101	4q23b	Homo sapiens dual adaptor of phosphotyrosine and 3-phosphoinositides (DAPP1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 10432293] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10432293] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 10432293] [evidence NAS]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]	DKFZp667E0716; BAM32	DKFZp667E0716; BAM32
Homo sapiens	Unigene	Hs.569313	ILMN_121494	HS.569313	Hs.569313		Hs.569313		79234009	DA297081			ILMN_1849618	0001400047	S	373	CTGCTGAGGAGCGGGTCTGGGAGGTGGAGGCCAGATACAAGAAAACCACA	14	-	100610185-100610218:100610571-100610586		DA297081 BRHIP2 Homo sapiens cDNA clone BRHIP2010218 5, mRNA sequence					
Homo sapiens	RefSeq	NR_002159.1	ILMN_14006	TTTY9B	NR_002159.1	NR_002159.1		425057	49487493	NR_002159.1	TTTY9B		ILMN_2197608	0003780678	S	1204	TCCTCTCTGGAGAACACAGCAACAAGGTGCCATCTTGGAAGAAGAGACCC	Y	-	20743475-20743524	Yq11.222a	Homo sapiens testis-specific transcript, Y-linked 9B (non-protein coding) (TTTY9B), non-coding RNA.				TTY9	TTY9
Homo sapiens	RefSeq	NM_207370.1	ILMN_3381	GPR153	NM_207370.1	NM_207370.1		387509	46409371	NM_207370.1	GPR153	NP_997253.1	ILMN_2146495	0001300110	S	2499	CATTGGCCTCCCCAGGGGCTTTCCACCCACACTGCACCATAACCGCCACA	1	-	6308939-6308988	1p36.31a	Homo sapiens G protein-coupled receptor 153 (GPR153), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	DKFZp762B2210; PGR1	DKFZp762B2210; PGR1
Homo sapiens	RefSeq	XR_017689.1	ILMN_180510	KRT18P28	XR_017689.1	XR_017689.1		343326	113411579	XR_017689.1	KRT18P28		ILMN_3178307	0002260068	A	1489	CTGGACAGGAGCAAGTCCGTGCAAACCATCCAAAAGACCACCACCCGCTG	1	-	181194889-181194938	1q25.3d	PREDICTED: Homo sapiens misc_RNA (KRT18P28), miscRNA.					
Homo sapiens	RefSeq	NM_173197.2	ILMN_10989	KCNIP2	NM_173197.2	NM_173197.2		30819	50557652	NM_173197.2	KCNIP2	NP_775289.1	ILMN_1657643	0001850358	A	441	AATTTGAATTGTCCACCGTGTGTCACCGGCCTGAGGGTCTGGAGCAGCTG	10	-	103593602-103593651	10q24.32a	Homo sapiens Kv channel interacting protein 2 (KCNIP2), transcript variant 7, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11287421] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 11287421] [evidence NAS]	The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal [goid 5513] [pmid 10676964] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 11287421] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 11287421] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10676964] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 11287421] [evidence NAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 11287421] [evidence TAS]; The process by which voltage-gated potassium channels become localized together in high densities. In animals, voltage-gated potassium (Kv) channels are clustered beneath the myelin sheath in regions immediately adjacent to paranodes, called juxtaparanodes, and along the inner mesaxon within the internode [goid 45163] [pmid 11287421] [evidence IDA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5250] [pmid 11287421] [evidence TAS]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 11287421] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with an endoplasmic reticulum (ER) retention sequence, a specific peptide sequence that ensures a protein is retained within the ER [goid 46923] [pmid 11287421] [evidence NAS]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11287421] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp566L1246; KCHIP2; MGC17241	DKFZp566L1246; KCHIP2; MGC17241
Homo sapiens	RefSeq	XM_936265.1	ILMN_33657	LOC642120	XM_936265.1	XM_936265.1		642120	89026478	XM_936265.1	LOC642120	XP_941358.1	ILMN_1659639	0000770048	S	1993	GACAAATTCACCACACACATCACACAGTTCGCTACTCCCCATTCTGCTAC					PREDICTED: Homo sapiens similar to Maltase-glucoamylase, intestinal (LOC642120), mRNA.					
Homo sapiens	RefSeq	XM_942234.1	ILMN_44909	LOC652664	XM_942234.1	XM_942234.1		652664	89063576	XM_942234.1	LOC652664	XP_947327.1	ILMN_1689066	0004850187	S	56	TACAGAAACCACAGCAAGTTCTGCTGTTTCCTTTTCTGCAGGAGTACTGC					PREDICTED: Homo sapiens similar to Tripartite motif protein 16 (Estrogen-responsive B box protein) (LOC652664), mRNA.					
Homo sapiens	RefSeq	NR_003046.1	ILMN_176274	SNORD59B	NR_003046.1	NR_003046.1		692090	94818685	NR_003046.1	SNORD59B		ILMN_3242164	0005910687	S	12	GATGAGTACGTTCTGACTTTCGTTCTTCTGAGTTTGCTGAAGCCAGATGC	12	-	57037477-57037526	12q13.3a	Homo sapiens small nucleolar RNA, C/D box 59B (SNORD59B), small nucleolar RNA.				U59B	U59B
Homo sapiens	RefSeq	XM_941722.1	ILMN_38534	LOC652305	XM_941722.1	XM_941722.1		652305	89062630	XM_941722.1	LOC652305	XP_946815.1	ILMN_1767702	0001980136	S	216	GCCTACGATGAAGATGAGACACTTCCTCTGGATGCTGAAAGTAACCACCT					PREDICTED: Homo sapiens similar to hypothetical protein LOC285927 (LOC652305), mRNA.					
Homo sapiens	RefSeq	NM_001040152.1	ILMN_165569	PEG10	NM_001040152.1	NM_001040152.1		23089	94421472	NM_001040152.1	PEG10	NP_001035242.1	ILMN_2297626	0007570630	I	6249	CGGAGGGAACTGCAGGGAGACCAACTTATTTAGAGCGAATTGGACATGGA	7	+	94136574-94136623	7q21.3b	Homo sapiens paternally expressed 10 (PEG10), transcript variant 1, mRNA. XM_940378	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites [goid 32196] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Mart2; MEF3L; Mar2; HB-1; KIAA1051; Edr; RGAG3	Mart2; MEF3L; Mar2; HB-1; KIAA1051; Edr; RGAG3
Homo sapiens	RefSeq	NM_002579.1	ILMN_174161	PALM	NM_002579.2	NM_002579.2		5064	93141030	NM_002579.2	PALM	NP_002570.2	ILMN_1812031	0004540682	S	2780	CCTTGCTATAACCCCCTCTGCTTCTGGTGTGTGACGAGGCCCCCGATGTT	19	+	699236-699285	19p13.3j-p13.3i	Homo sapiens paralemmin (PALM), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9615234] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9813098] [evidence TAS]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 9813098] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9813098] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IEA]	Interacting selectively with a D3 dopamine receptor [goid 31750] [evidence IEA]	KIAA0270	KIAA0270
Homo sapiens	RefSeq	NM_002579.2	ILMN_174161	PALM	NM_002579.2	NM_002579.2		5064	93141030	NM_002579.2	PALM	NP_002570.2	ILMN_2387214	0003440037	A	2447	CGTCCCCAGAGGCACATTCGTGCACATTCTCACAGACACCGTCTCACACG	19	+	698903-698952	19p13.3j-p13.3i	Homo sapiens paralemmin (PALM), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9615234] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9813098] [evidence TAS]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 9813098] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9813098] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IEA]	Interacting selectively with a D3 dopamine receptor [goid 31750] [evidence IEA]	KIAA0270	KIAA0270
Homo sapiens	RefSeq	NM_002579.2	ILMN_174161	PALM	NM_002579.2	NM_002579.2		5064	93141030	NM_002579.2	PALM	NP_002570.2	ILMN_2283185	0002630367	I	707	GGTTGAGATCACTGTGGAGAAGGACAAGGTGACAGGGGAGACCAGGGTGC	19	+	691362-691411	19p13.3j-p13.3i	Homo sapiens paralemmin (PALM), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9615234] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9813098] [evidence TAS]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 9813098] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9813098] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IEA]	Interacting selectively with a D3 dopamine receptor [goid 31750] [evidence IEA]	KIAA0270	KIAA0270
Homo sapiens	RefSeq	NM_002365.3	ILMN_183925	MAGEB3	NM_002365.3	NM_002365.3		4114	45446750	NM_002365.3	MAGEB3	NP_002356.2	ILMN_1785114	0000110129	S	1816	GGGCAGTCACTGTTCCAAGGAGTGAAGGACTGGGTGTTACTGGAGGGAAC	X	+	30165041-30165090	Xp21.2a	Homo sapiens melanoma antigen family B, 3 (MAGEB3), mRNA.					
Homo sapiens	RefSeq	NM_018291.2	ILMN_1475	FLJ10986	NM_018291.2	NM_018291.2		55277	21361729	NM_018291.2	FLJ10986	NP_060761.2	ILMN_1737604	0002650164	S	1539	AGGTGGAGTCCGTTCTTGTGGGTGCTGCTGTTCTGGGTGCCTGTGCCTCA	1	+	59912323-59912372	1p32.1d-p32.1c	Homo sapiens hypothetical protein FLJ10986 (FLJ10986), mRNA.				RP11-242B9.1	RP11-242B9.1
Homo sapiens	RefSeq	NM_138317.1	ILMN_22948	KCNK10	NM_138317.1	NM_138317.1		54207	20143943	NM_138317.1	KCNK10	NP_612190.1	ILMN_1709253	0002370121	I	63	TGGGGTTCCTCCACGAGCCAGTCCAAGGCTCCCCCATCCTCGGAAATTGT	14	-	87858988-87859037	14q31.3d	Homo sapiens potassium channel, subfamily K, member 10 (KCNK10), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10880510] [evidence NAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [pmid 10880510] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	K2p10.1; TREK-2; TREK2	K2p10.1; TREK-2; TREK2
Homo sapiens	RefSeq	NM_018085.3	ILMN_29882	IPO9	NM_018085.4	NM_018085.4		55705	112734865	NM_018085.4	IPO9	NP_060555.2	ILMN_1723117	0005090541	S	2990	GGAGGATTACTACGAGGATGATGAGGAAGATGACCCTGATGCCCTGAAGG	1	+	200110904-200110953	1q32.1c	Homo sapiens importin 9 (IPO9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11823430] [evidence IDA]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [evidence ISS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 11823430] [evidence IDA]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence ISS]	DKFZp761M1547; FLJ10402; Imp9	DKFZp761M1547; FLJ10402; Imp9
Homo sapiens	RefSeq	NR_001526.1	ILMN_7291	TTTY17A	NR_001526.1	NR_001526.1		252949	32563532	NR_001526.1	TTTY17A		ILMN_2055396	0001500554	S	68	CAGGCTGCTGAGGTGCCCATTCTCAAGATTTTCACTGGACATTCTGGGGT	Y	+	23408152-23408201	Yq11.223c	Homo sapiens testis-specific transcript, Y-linked 17A (non-protein coding) (TTTY17A), non-coding RNA.				TTTY17; putative non-coding transcript	TTTY17; putative non-coding transcript
Homo sapiens	RefSeq	NR_001526.1	ILMN_7291	TTTY17A	NR_001526.1	NR_001526.1		252949	32563532	NR_001526.1	TTTY17A		ILMN_2055391	0001470612	S	71	GCTGCTGAGGTGCCCATTCTCAAGATTTTCACTGGACATTCTGGGGTCCC	Y	+	23408155-23408204	Yq11.223c	Homo sapiens testis-specific transcript, Y-linked 17A (non-protein coding) (TTTY17A), non-coding RNA.				TTTY17; putative non-coding transcript	TTTY17; putative non-coding transcript
Homo sapiens	RefSeq	NR_001526.1	ILMN_7291	TTTY17A	NR_001526.1	NR_001526.1		252949	32563532	NR_001526.1	TTTY17A		ILMN_1663406	0002710092	S	61	GTGTGTTCAGGCTGCTGAGGTGCCCATTCTCAAGATTTTCACTGGACATT	Y	+	23408145-23408194	Yq11.223c	Homo sapiens testis-specific transcript, Y-linked 17A (non-protein coding) (TTTY17A), non-coding RNA.				TTTY17; putative non-coding transcript	TTTY17; putative non-coding transcript
Homo sapiens	RefSeq	XR_037083.1	ILMN_341381	LOC100133740	XR_037083.1	XR_037083.1		100133740	169173141	XR_037083.1	LOC100133740		ILMN_3206884	0001410154	A	456	GCCGCGCGGACCCAACGAGCCCGCGCTCAGACGCCCCAGCTCCGCCGAGA					PREDICTED: Homo sapiens misc_RNA (LOC100133740), miscRNA.					
Homo sapiens	Unigene	Hs.541731	ILMN_105897	HS.541731	Hs.541731		Hs.541731		6704516	AW297891			ILMN_1817396	0005860598	S	94	aaaaaGGGTGTCGGGCAAAAGGGTGCAAAAGGCAGGAGTGCCTGACCTCT	2	+	148725149-148725198		UI-H-BW0-aju-f-04-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2733078 3, mRNA sequence					
Homo sapiens	RefSeq	NR_029875.1	ILMN_388225	MIR383	NR_029875.1	NR_029875.1		494332	262206269	NR_029875.1	MIR383		ILMN_3309995	0003360246	S	22	GTGGCTTTGGGTGGATATTAATCAGCCACAGCACTGCCTGGTCAGAAAGA				8p22d	Homo sapiens microRNA 383 (MIR383), microRNA.					
Homo sapiens	RefSeq	XM_001719900.1	ILMN_350168	LOC100127919	XM_001719900.1	XM_001719900.1		100127919	169203819	XM_001719900.1	LOC100127919	XP_001719952.1	ILMN_3270511	0003450296	M	200	CAAGAGCAACAATCCTCAGGGAAATCACAGATCACTTGCTTTACAGGAGG	12	+	91953371-91953420	12q22a	PREDICTED: Homo sapiens similar to developmental pluripotency-associated 3 (LOC100127919), mRNA.					
Homo sapiens	RefSeq	NM_015688.1	ILMN_370801	FAM184B	NM_015688.1	NM_015688.1		27146	210032789	NM_015688.1	FAM184B	NP_056503.1	ILMN_3240888	0000580564	S	3329	CCAAAGAAGTCCAGCAGAAACAGGGCTCTCCGCACCAGGAATGGTTCACC	4	-	17634172-17634221	4p15.32b	Homo sapiens family with sequence similarity 184, member B (FAM184B), mRNA.					
Homo sapiens	RefSeq	NM_031915.1	ILMN_24431	SETDB2	NM_031915.1	NM_031915.1		83852	13994281	NM_031915.1	SETDB2	NP_114121.1	ILMN_1731644	0005390646	S	2906	GCTATGAAGCTGGGACTGTGCCTGAGAAGGAAATCTTCTGCCAATGTGGG	13	+	48963907-48963956	13q14.3a	Homo sapiens SET domain, bifurcated 2 (SETDB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	KMT1F; CLLD8; DKFZp586I0123; CLLL8; C13orf4; DKFZp761J1217	KMT1F; CLLD8; DKFZp586I0123; CLLL8; C13orf4; DKFZp761J1217
Homo sapiens	Unigene	Hs.552826	ILMN_111132	HS.552826	Hs.552826		Hs.552826		21753907	AK094779			ILMN_1835658	0005090551	S	1966	CCAAGACCAAATGGGGGTTCTCTAGCCGCCAACTTGAAACGCTCTGAGAC	1	+	18947528-18947577		Homo sapiens cDNA FLJ37460 fis, clone BRAWH2011286					
Homo sapiens	Unigene	Hs.584299	ILMN_136480	HS.584299	Hs.584299		Hs.584299		34555129	BP432430			ILMN_1866370	0001580646	S	74	GTCCAAAGAAGCTCCCAACTGCCTACGTCCAGACCTCACTTACACAGGTC	9	+	79470864-79470906:79474954-79474960		BP432430 leukemia cell normalized cDNA library Homo sapiens cDNA clone LEU3471_42_B11, mRNA sequence					
Homo sapiens	RefSeq	XM_498712.2	ILMN_36196	LOC440509	XM_498712.2	XM_498712.2		440509	89052426	XM_498712.2	LOC440509	XP_498712.2	ILMN_1684407	0006110156	A	936	TGGGCAAATGCGCAGGTTTTGGAAAGTTCCATGTGTAGGGGGATGGAGGG	19	-	13490849-13490898		PREDICTED: Homo sapiens hypothetical LOC440509 (LOC440509), mRNA.					
Homo sapiens	RefSeq	NM_138999.1	ILMN_10038	NETO1	NM_138999.1	NM_138999.1		81832	20452469	NM_138999.1	NETO1	NP_620552.1	ILMN_2249578	0005960195	I	646	CTGTGGTGCCCAGAACGTTGATCTAACACCATCTTGAAGCACACATGCTG	18	-	70502427-70502476	18q22.3b	Homo sapiens neuropilin (NRP) and tolloid (TLL)-like 1 (NETO1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BCTL1; BTCL1	BCTL1; BTCL1
Homo sapiens	RefSeq	NM_002757.2	ILMN_12453	MAP2K5	NM_002757.2	NM_002757.2		5607	21729893	NM_002757.2	MAP2K5	NP_002748.1	ILMN_1718129	0006330278	A	2147	CCCACCAGGCCATCCCCATACCTTCTGGTTTGAAGGCGCTGACACTGGCA	15	+	65886319-65886368	15q23a	Homo sapiens mitogen-activated protein kinase kinase 5 (MAP2K5), transcript variant B, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7759517] [evidence TAS]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7759517] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MAPKK5; HsT17454; PRKMK5; MEK5	MAPKK5; HsT17454; PRKMK5; MEK5
Homo sapiens	RefSeq	NM_052985.1	ILMN_21169	IFT122	NM_052985.1	NM_052985.1		55764	16554620	NM_052985.1	IFT122	NP_443711.1	ILMN_1720724	0001010646	I	552	GCCACAGATAAAGCACCTAAAGGCCAAGGTGGGAGGATTGATTGCTTGAG	3	+	130662460-130662509	3q21.3d	Homo sapiens intraflagellar transport 122 homolog (Chlamydomonas) (IFT122), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]			SPG; WDR10p; WDR140; WDR10	SPG; WDR10p; WDR140; WDR10
Homo sapiens	RefSeq	NM_015004.2	ILMN_11047	EXOSC7	NM_015004.2	NM_015004.2		23016	39725632	NM_015004.2	EXOSC7	NP_055819.1	ILMN_2055477	0006450687	S	764	TCGAGATGATGGAGACTGGCAAGCGTGTGGGCAAGGTACTGCATGCCTCC	3	+	45024058-45024071:45027731-45027766	3p21.31k	Homo sapiens exosome component 7 (EXOSC7), mRNA.	Complex of 3'-5' exoribonucleases [goid 178] [pmid 11849973] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [pmid 11849973] [evidence TAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 6401] [pmid 11719186] [evidence NAS]	Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [pmid 11849973] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11849973] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11812149] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	hRrp42p; FLJ26543; Rrp42p; KIAA0116; p8; EAP1; RRP42	hRrp42p; FLJ26543; Rrp42p; KIAA0116; p8; EAP1; RRP42
Homo sapiens	RefSeq	NM_015267.1	ILMN_168796	CUX2	NM_015267.2	NM_015267.2		23316	116517291	NM_015267.2	CUX2	NP_056082.2	ILMN_1669876	0006450066	S	6672	AAAGCTAGCGGACCCGTGAACAACTTTGTCAGGTTCACGTCCTATAACGG	12	+	110272570-110272619	12q24.11d-q24.12a	Homo sapiens cut-like homeobox 2 (CUX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	CUTL2; CUX2; CDP2	CUX2
Homo sapiens	RefSeq	NM_004807.1	ILMN_21157	HS6ST1	NM_004807.1	NM_004807.1		9394	4758565	NM_004807.1	HS6ST1	NP_004798.2	ILMN_1759987	0000150192	S	1716	CCCTCACCAACTATGCACACAGCACTCGCTCTTAACTCCTCTGTCCGGGC	2	-	128741791-128741840	2q14.3e	Homo sapiens heparan sulfate 6-O-sulfotransferase 1 (HS6ST1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9535912] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The modification, often by sulfation, of sugars incorporated into heparan sulfate after polymerization [goid 15015] [pmid 9535912] [evidence TAS]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [pmid 9535912] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HS6ST; MGC116899; MGC116901	HS6ST; MGC116899; MGC116901
Homo sapiens	RefSeq	NM_007128.2	ILMN_19366	VPREB1	NM_007128.2	NM_007128.2		7441	18379350	NM_007128.2	VPREB1	NP_009059.1	ILMN_1738549	0004180692	S	551	GCCACTCAGCATCTCCTGGTCCTGCAGTGTTGCTGTAAATCCCCATTGGA	22	+	20929836-20929885	22q11.22a	Homo sapiens pre-B lymphocyte 1 (VPREB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence NAS]	Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [evidence NAS]	IGI; IGVPB; VPREB	IGI; IGVPB; VPREB
Homo sapiens	RefSeq	XM_001129914.1	ILMN_162165	LOC729312	XM_001129914.1	XM_001129914.1		729312	113413209	XM_001129914.1	LOC729312	XP_001129914.1	ILMN_3224982	0000050669	A	615	CTGCCTGCGTACTGATGCTGCCCCAAATTCTATATCCCCCTGGAATCAGC	2	+	111670114-111670132:111680253-111680283	2q13c	PREDICTED: Homo sapiens hypothetical LOC729312 (LOC729312), mRNA.					
Homo sapiens	RefSeq	XR_038050.1	ILMN_344735	LOC100133076	XR_038050.1	XR_038050.1		100133076	169210114	XR_038050.1	LOC100133076		ILMN_3243414	0004860470	S	275	CAGGATCGCACTCGGGCTGCTGGGAGGTAGGCAGGGACTTGGGCCTGGGA	16	+	88764672-88764721	16q24.3b	PREDICTED: Homo sapiens misc_RNA (LOC100133076), miscRNA.					
Homo sapiens	RefSeq	NM_201453.1	ILMN_307481	CBWD6	NM_001085457.1	NM_001085457.1		644019	146231951	NM_001085457.1	CBWD6	NP_001078926.1	ILMN_1659006	0006110554	S	287	TATATTTTGACAGAGCAACATAGTAAAAGAGTAGCGGTCATTTTAAATGA	9	-	69259232-69259281	9q12i	Homo sapiens COBW domain containing 6 (CBWD6), mRNA.				DKFZp686L07117	bA561O23.1
Homo sapiens	RefSeq	NM_172037.2	ILMN_15956	RDH10	NM_172037.2	NM_172037.2		157506	46048189	NM_172037.2	RDH10	NP_742034.1	ILMN_1714335	0007050433	S	2236	GTGCCCTTTCCTCAGGAAGTTGCTGTGTTTCATTTCTTTGGATGGACTCT	8	+	74398847-74398896	8q21.11a	Homo sapiens retinol dehydrogenase 10 (all-trans) (RDH10), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 12407145] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [pmid 12407145] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	RefSeq	NM_001032282.1	ILMN_13762	KLF10	NM_001032282.1	NM_001032282.1		7071	73760402	NM_001032282.1	KLF10	NP_001027453.1	ILMN_1667594	0003990292	I	70	ACACACACGCGCGCTGTCCATTGCAGCTTACATAAAGGCGGGCGCGATTA	8	-	103735076-103735125	8q22.3b	Homo sapiens Kruppel-like factor 10 (KLF10), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9748269] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9748269] [evidence TAS]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10816551] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 10816551] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8532536] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9748269] [evidence TAS]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9748269] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10816551] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10976766] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EGRA; TIEG; TIEG1	TIEG; EGRA; TIEG1
Homo sapiens	RefSeq	NM_020999.2	ILMN_2605	NEUROG3	NM_020999.2	NM_020999.2		50674	68989257	NM_020999.2	NEUROG3	NP_066279.2	ILMN_1765244	0004180274	S	887	GGCGGCCCTCAAAAGCACTTGTTCCTTCTGCTTCTCCCTGGCTGACCCCT	10	-	71332021-71332070	10q21.3e	Homo sapiens neurogenin 3 (NEUROG3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9000438] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [pmid 9000438] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	Atoh5; ngn3; Math4B	Atoh5; ngn3; Math4B
Homo sapiens	RefSeq	NM_014261.1	ILMN_11434	TICAM1	NM_182919.1	NM_182919.1		148022	41281980	NM_182919.1	TICAM1	NP_891549.1	ILMN_1815079	0003360291	A	2087	GCTGCAACCCCTCATTATCCACCACGCACAGATGGTACAGCTGGGGCTGA	19	-	4767315-4767364	19p13.3d	Homo sapiens toll-like receptor adaptor molecule 1 (TICAM1), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12609980] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12855817] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12692549] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14556004] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15064760] [evidence EXP]	A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response [goid 2281] [evidence IEA]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2756] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IEA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 32481] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IEA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	MGC35334; TRIF; TICAM-1; PRVTIRB	MGC35334; TRIF; TICAM-1; PRVTIRB
Homo sapiens	RefSeq	NM_182919.1	ILMN_11434	TICAM1	NM_182919.1	NM_182919.1		148022	41281980	NM_182919.1	TICAM1	NP_891549.1	ILMN_1724863	0005570730	I	2357	GACAAAACGGGCGCGATGATGCCCTGGCTTTCAGGGTGGTCAGAACTGGA	19	-	4767045-4767094	19p13.3d	Homo sapiens toll-like receptor adaptor molecule 1 (TICAM1), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12609980] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12855817] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12692549] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14556004] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15064760] [evidence EXP]	A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response [goid 2281] [evidence IEA]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2756] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IEA]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 32481] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IEA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	MGC35334; TRIF; TICAM-1; PRVTIRB	MGC35334; TRIF; TICAM-1; PRVTIRB
Homo sapiens	Unigene	Hs.130916	ILMN_77056	HS.130916	Hs.130916		Hs.130916		28145496	CB159370			ILMN_1863284	0002710291	S	322	CCAGAGACCACAGTCTGTAACTTCCCCTGCTTTCAGTGGTTACCTCTGGG	11	+	85675987-85676036		K-EST0218892 L18POOL1n1 Homo sapiens cDNA clone L18POOL1n1-30-G08 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001013654.1	ILMN_17116	LOC389832	NM_001013654.1	NM_001013654.1		389832	61966754	NM_001013654.1	LOC389832	NP_001013676.1	ILMN_1659851	0003390167	S	1416	GGGGCCTTGAGTTTTACTAGGGACTCGTGTCTGCCTTGGACCTGGGTGTA	21	+	108639-108688		Homo sapiens similar to chromosome 2 open reading frame 27 (LOC389832), mRNA.					
Homo sapiens	RefSeq	NM_203364.2	ILMN_164541	CAPRIN1	NM_005898.4	NM_005898.4		4076	61676201	NM_005898.4	CAPRIN1	NP_005889.3	ILMN_1754145	0006520220	A	2065	CGGGGCCCTGCCAATGGATTCAGAGGAGGATATGATGGTTACCGCCCTTC	11	+	34073400-34073418:34073968-34073998	11p13c	Homo sapiens cell cycle associated protein 1 (CAPRIN1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7657653] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]			M11S1; p137GPI; GPIP137; GPIAP1; caprin-1	GPIP137; GPIAP1; caprin-1; M11S1; p137GPI
Homo sapiens	RefSeq	NM_005898.4	ILMN_164541	CAPRIN1	NM_005898.4	NM_005898.4		4076	61676201	NM_005898.4	CAPRIN1	NP_005889.3	ILMN_1770676	0002680730	I	5390	TGCCCTTGATCTTGTCCTTTTTATGGAGTTAACGGGGAGGAAGACCCCTC	11	+	34080156-34080205	11p13c	Homo sapiens cell cycle associated protein 1 (CAPRIN1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7657653] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]			M11S1; p137GPI; GPIP137; GPIAP1; caprin-1	GPIP137; GPIAP1; caprin-1; M11S1; p137GPI
Homo sapiens	RefSeq	XM_931120.1	ILMN_138806	NBPF20	XM_931120.1	XM_931120.1		400818	88943997	XM_931120.1	NBPF20	XP_936213.1	ILMN_1800414	0003440040	I	2810	CAAGGACTTCTTGGGTAAGAACGGAGATGGGAAACCCATGGGGTTGGAGG	1	+	174532-174581	1q21.1d	PREDICTED: Homo sapiens neuroblastoma breakpoint family, member 20, transcript variant 4 (NBPF20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NR_002742.1	ILMN_6819	SNORD52	NR_002742.1	NR_002742.1		26797	84872020	NR_002742.1	SNORD52		ILMN_3246391	0006840326	S	1	GGGAATGATGATTTCACAGACTAGAGTCTCCGATGCTGGTCATGATGTCA	6	+	31912832-31912881	6p21.32b	Homo sapiens small nucleolar RNA, C/D box 52 (SNORD52), non-coding RNA.				RNU52; U52	RNU52; U52
Homo sapiens	RefSeq	XM_935475.1	ILMN_40863	LOC653820	XM_935475.1	XM_935475.1		653820	88942999	XM_935475.1	LOC653820	XP_940568.1	ILMN_1723433	0003840358	I	264	GAGGAGCCTCCGCCGCCTCCGCCAACTCCGCAGGACCCCGCCGGGAAGTA	1	+	120639833-120639882	1p12a	PREDICTED: Homo sapiens similar to family with sequence similarity 72, member A, transcript variant 2 (LOC653820), mRNA.					
Homo sapiens	RefSeq	NR_024380.1	ILMN_370606	LOC441666	NR_024380.1	NR_024380.1		441666	211971053	NR_024380.1	LOC441666		ILMN_3239709	0003140201	S	6150	GAGGCTGAGGTGGGAGAATCACTAAGTCAAGAGATTGAGACCTTCCTGGC	10	-	42827775-42827824	10q11.21a	Homo sapiens zinc finger protein 91 pseudogene (LOC441666), non-coding RNA.					
Homo sapiens	Unigene	Hs.144030	ILMN_78037	HS.144030	Hs.144030		Hs.144030		5367351	AI801879			ILMN_1871306	0000360040	S	278	GTCCAGGAAGTCTAGTGAATTCGACCATGAATCCAGACATGGCCAGTGGC	8	+	80877314-80877363		tx28f05.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2270913 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015355.1	ILMN_7988	SUZ12	NM_015355.1	NM_015355.1		23512	15149469	NM_015355.1	SUZ12	NP_056170.1	ILMN_1797813	0004920619	S	3967	CTCTGATTTTTGCCTCTGGATAGTAGATCTCGAGCGTTTATCTCGGGCTT	17	+	27351688-27351737	17q11.2d	Homo sapiens suppressor of zeste 12 homolog (Drosophila) (SUZ12), mRNA.	A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [pmid 15385962] [evidence IMP]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IEA]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [pmid 15385962] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CHET9; KIAA0160; JJAZ1	CHET9; KIAA0160; JJAZ1
Homo sapiens	RefSeq	NM_001004486.1	ILMN_183465	OR13H1	NM_001004486.1	NM_001004486.1		347468	52218867	NM_001004486.1	OR13H1	NP_001004486.1	ILMN_1718219	0006110722	S	659	TTGCTATGGCTATCATAAGGATTCGCTCACTCCAGGGCAGGCTCAAGGCC	X	+	130506387-130506436	Xq26.2a	Homo sapiens olfactory receptor, family 13, subfamily H, member 1 (OR13H1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	ORX1	ORX1
Homo sapiens	Unigene	Hs.134521	ILMN_77557	HS.134521	Hs.134521		Hs.134521		27847880	BX108458			ILMN_1889468	0005080397	S	214	CCATGGCTGTCGGTGTGAGGCTGTAGCTCTGTGGAAAACGCAGACCACAC	20	+	60737413-60737462		BX108458 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGp998J154261, mRNA sequence					
Homo sapiens	RefSeq	XR_038343.1	ILMN_334828	LOC100133200	XR_038343.1	XR_038343.1		100133200	169177415	XR_038343.1	LOC100133200		ILMN_3235549	0002320725	S	444	TAGCACGGGGCCAAGACAGGGTCAGGATGGGACCAGAGCAGGACAGGGCT	9	+	66694364-66694413	9q12g	PREDICTED: Homo sapiens misc_RNA (LOC100133200), miscRNA.					
Homo sapiens	RefSeq	XM_944859.1	ILMN_43375	LOC651675	XM_944859.1	XM_944859.1		651675	89037863	XM_944859.1	LOC651675	XP_949952.1	ILMN_1670273	0005560524	S	347	TTGCATCTGTGCGTCACAGCTTAGAGATCAATAATGGATGCAACAAGCTG					PREDICTED: Homo sapiens hypothetical protein LOC651675 (LOC651675), mRNA.					
Homo sapiens	RefSeq	NM_004055.3	ILMN_30845	CAPN5	NM_004055.4	NM_004055.4		726	87044927	NM_004055.4	CAPN5	NP_004046.2	ILMN_1737089	0006760661	S	4292	CACACCACCCAGACCTAGGCTTCCCTCTTCTCAGGATCCACCACAGGGTT	11	+	76514748-76514797	11q13.5c	Homo sapiens calpain 5 (CAPN5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9339374] [evidence TAS]	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [pmid 9339374] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	HTRA3; FLJ46245; nCL-3	HTRA3; FLJ46245; nCL-3
Homo sapiens	RefSeq	NM_017741.2	ILMN_172318	DCAF16	NM_017741.3	NM_017741.3		54876	98162801	NM_017741.3	DCAF16	NP_060211.3	ILMN_1753440	0005890707	S	3620	CTGTGTGTGGTCCTGGTTGACTGGGCATCTAAAGGGAATCAGAAAAGAGA	4	-	17803156-17803205	4p15.32b	Homo sapiens DDB1 and CUL4 associated factor 16 (DCAF16), mRNA.				FLJ20280; MGC126765; MGC126767	
Homo sapiens	RefSeq	NM_144677.2	ILMN_10612	MGAT5B	NM_144677.2	NM_144677.2		146664	39812180	NM_144677.2	MGAT5B	NP_653278.2	ILMN_1692477	0002470195	A	3764	CCTTGTCCCTACCTCCAGCTTCCTCCAGCCTCAAACCGCCTCTGGATCTA	17	+	72457592-72457641	17q25.2a	Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B (MGAT5B), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors [goid 30144] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA2008; GnT-VB; GnT-IX; FLJ25132	KIAA2008; GnT-VB; GnT-IX; FLJ25132
Homo sapiens	Unigene	Hs.538607	ILMN_104010	HS.538607	Hs.538607		Hs.538607		3203910	AI003576			ILMN_1859293	0007560504	S	131	AGTGTTTTGGGAAGGAGAAGCATTAGTGGGACTGGGGTGCCTCCATAGGG	10	-	9370069-9370118		ai88d03.s1 Soares_parathyroid_tumor_NbHPA Homo sapiens cDNA clone IMAGE:1387877 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016422.3	ILMN_25007	RNF141	NM_016422.3	NM_016422.3		50862	38045936	NM_016422.3	RNF141	NP_057506.2	ILMN_1815010	0004220372	S	3902	GAGAACTATTTTATATTGTGCGCTGGGGGCTTGTGATGTTTGTGTGCTGT	11	-	10533357-10533406	11p15.4a	Homo sapiens ring finger protein 141 (RNF141), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF230; MGC8715; ZFP26	ZNF230; MGC8715; ZFP26
Homo sapiens	RefSeq	NM_032139.1	ILMN_2290	ANKRD27	NM_032139.2	NM_032139.2		84079	116063533	NM_032139.2	ANKRD27	NP_115515.2	ILMN_1794063	0005670112	S	3764	GAGGCCAGGCTGAAATGTCATATCTGAAGGAAGAAAGCAGCAGCTGGACA	19	-	37780386-37780435	19q13.11a	Homo sapiens ankyrin repeat domain 27 (VPS9 domain) (ANKRD27), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 11256614] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 16525121] [evidence IDA]	The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs [goid 45022] [pmid 16525121] [evidence IDA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 16525121] [evidence IDA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	FLJ00040; VARP; PP12899; DKFZP434L0718	FLJ00040; DKFZP434L0718
Homo sapiens	RefSeq	XM_001721607.1	ILMN_344889	LOC100131500	XM_001721607.1	XM_001721607.1		100131500	169212927	XM_001721607.1	LOC100131500	XP_001721659.1	ILMN_3287153	0005960403	M	13	GCAGTGATGGAAGTGCCTCAGTCAGCCTGGAAGACTGTATGGATGGAGGT				18p11.21a	PREDICTED: Homo sapiens similar to Uncharacterized protein C21orf94 (LOC100131500), mRNA.					
Homo sapiens	RefSeq	XM_938648.1	ILMN_35525	LOC649578	XM_938648.1	XM_938648.1		649578	89026013	XM_938648.1	LOC649578	XP_943741.1	ILMN_1670442	0002230743	S	269	GGCGGAGGCAAAAAGCTGCAAAAGCCTCGGTGCGGGTGAAAAAAGTCGCG					PREDICTED: Homo sapiens hypothetical protein LOC649578 (LOC649578), mRNA.					
Homo sapiens	RefSeq	NM_145295.2	ILMN_8177	ZNF627	NM_145295.2	NM_145295.2		199692	42734386	NM_145295.2	ZNF627	NP_660338.1	ILMN_1708787	0000870594	S	1866	GGCTGTATGGACACTTGCTTCCATCCCATTTTCCTGCTTCTTTGGGTTGC	19	+	11590068-11590117	19p13.2a	Homo sapiens zinc finger protein 627 (ZNF627), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ90365	FLJ90365
Homo sapiens	RefSeq	NM_145295.2	ILMN_8177	ZNF627	NM_145295.2	NM_145295.2		199692	42734386	NM_145295.2	ZNF627	NP_660338.1	ILMN_2197519	0000240132	S	2663	GTGCTCTCTTGCTAAAGACCGCAGAGACCATACCTGTTGTCAAAGAGGGT	19	+	11590865-11590914	19p13.2a	Homo sapiens zinc finger protein 627 (ZNF627), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ90365	FLJ90365
Homo sapiens	RefSeq	NM_004173.1	ILMN_22167	SLC7A4	NM_004173.2	NM_004173.2		6545	110347452	NM_004173.2	SLC7A4	NP_004164.2	ILMN_1774229	0001570047	S	2135	CTTCGGGTCTTCAGGAGTGGGCCTTGGCTGGTGCTGGTGCCATGGACTCT	22	-	21383135-21383184	22q11.21e	Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 (SLC7A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9598310] [evidence TAS]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 9598310] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9598310] [evidence TAS]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]	Catalysis of the transfer of basic amino acids from one side of a membrane to the other. Acidic amino acids have a pH above 7 [goid 15174] [pmid 9598310] [evidence TAS]	CAT-4; MGC129977; CAT4; HCAT3; VH; MGC129976	CAT-4; MGC129977; CAT4; HCAT3; MGC129976; VH
Homo sapiens	RefSeq	NM_006134.4	ILMN_138521	TMEM50B	NM_006134.4	NM_006134.4		757	40538810	NM_006134.4	TMEM50B	NP_006125.2	ILMN_1757391	0004480647	S	2667	TATCCTCCACTCCTCGCTGGCCACCATCCTGCTGCCCAACAGAAGAAGCT	21	-	33733418-33733467	21q22.11c	Homo sapiens transmembrane protein 50B (TMEM50B), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16780588] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C21orf4; HCVP7TP3	C21orf4; HCVP7TP3
Homo sapiens	RefSeq	NM_015985.2	ILMN_13847	ANGPT4	NM_015985.2	NM_015985.2		51378	21328453	NM_015985.2	ANGPT4	NP_057069.1	ILMN_1758443	0006040343	S	1641	CACACAGGAGAAGCTCGGACTTGGCACTCCTGGACAACCTGGACCCAGAT	20	-	853527-853576	20p13f-p13e	Homo sapiens angiopoietin 4 (ANGPT4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA];  [goid 30297] [evidence NAS]	ANG4; ANG-3; MGC138183; AGP4; MGC138181	ANG4; ANG-3; MGC138183; AGP4; MGC138181
Homo sapiens	RefSeq	NM_002354.2	ILMN_372081	EPCAM	NM_002354.2	NM_002354.2		4072	218505669	NM_002354.2	EPCAM	NP_002345.2	ILMN_3249032	0001690553	S	1051	GGACCTGACAGTAAATGGGGAACAACTGGATCTGGATCCTGGTCAAACTT	2	+	47606943-47606992	2p21a	Homo sapiens epithelial cell adhesion molecule (EPCAM), mRNA.					
Homo sapiens	RefSeq	XM_001722889.1	ILMN_343333	LOC100133373	XM_001722889.1	XM_001722889.1		100133373	169169198	XM_001722889.1	LOC100133373	XP_001722941.1	ILMN_3242386	0005050201	S	242	ACCCAGGTGGACTGTTTTCACCTGATCATGAAAGCTGTTGGGCCTGTACC	6	-	30101949-30101998		PREDICTED: Homo sapiens hypothetical protein LOC100133373 (LOC100133373), mRNA.					
Homo sapiens	RefSeq	XM_496191.2	ILMN_169926	FAM106A	XR_017880.1	XR_017880.1		80039	113426600	XR_017880.1	FAM106A		ILMN_1714219	0007610039	S	1921	AGTAGAAATGAGGTCTCGCCATATTGCTCAGACTGGTCTTGAACCAACAC	17	-	18368915-18368964	17p11.2f	PREDICTED: Homo sapiens family with sequence similarity 106, member A (FAM106A), misc RNA.					
Homo sapiens	RefSeq	XR_017653.1	ILMN_170002	LOC391532	XR_017653.1	XR_017653.1		391532	113425292	XR_017653.1	LOC391532		ILMN_3292163	0002450255	M	523	CAGACCGTTCCTTCTGTAGCTCAGGACAGCACCCTCCACCCCACTTACTC	15	+	73826687-73826736	15q24.2a	PREDICTED: Homo sapiens misc_RNA (LOC391532), miscRNA.					
Homo sapiens	RefSeq	NM_014356.2	ILMN_2861	C6ORF123	NM_014356.2	NM_014356.2		26238	40254855	NM_014356.2	C6orf123	NP_055171.1	ILMN_1726152	0001110750	S	1628	TTTATCAAAATGTAATAAAAAATAAATACAACTTTTCCAATGACAAAAAA	6	-	784230-784255:167928066-167928089	6q27d	Homo sapiens chromosome 6 open reading frame 123 (C6orf123), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP3-431P23.4; dJ431P23.4; HGC6.2	RP3-431P23.4; dJ431P23.4; HGC6.2
Homo sapiens	RefSeq	NM_020698.1	ILMN_17968	TMCC3	NM_020698.1	NM_020698.1		57458	29789109	NM_020698.1	TMCC3	NP_065749.1	ILMN_1685493	0003440400	S	4505	GGGCAAACCCAAAGATGGAAAGTGCTTGTTGGGTGGGTAAGCACCACCTG	12	-	93486339-93486388	12q22c	Homo sapiens transmembrane and coiled-coil domain family 3 (TMCC3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA1145	KIAA1145
Homo sapiens	RefSeq	XM_930050.1	ILMN_32792	LOC653806	XM_930050.1	XM_930050.1		653806	89038503	XM_930050.1	LOC653806	XP_935143.1	ILMN_1719807	0002190070	S	558	CATTGACAGTGGGAAAAATCCTACACTTCCCCTTTCCTGCCTGCTTAATG	15	+	80591967-80591999:80592547-80592563		PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a-like (LOC653806), mRNA.					
Homo sapiens	RefSeq	NM_024766.1	ILMN_14025	C2ORF34	NM_024766.2	NM_024766.2		79823	142382558	NM_024766.2	C2orf34	NP_079042.1	ILMN_1738099	0004120356	S	1194	CCTCCCCGCCTCTTTTTACACTCTGCTTGTTGCTCGTCCTGCCCTAAACC	2	+	44852934-44852983	2p21d-p21c	Homo sapiens chromosome 2 open reading frame 34 (C2orf34), mRNA.				FLJ23451	FLJ23451
Homo sapiens	RefSeq	Hs.27688	ILMN_172643	CDKL2	NM_003948.3	NM_003948.3		8999	125987600	NM_003948.3	CDKL2	NP_003939.1	ILMN_1856533	0002630280	S	4537	TGAACCATGGTCAGGGGATTAGAGAAGCAACAGAGCACTGCTCCTAAGGC	4	-	76720856-76720905	4q21.1a	Homo sapiens cyclin-dependent kinase-like 2 (CDC2-related kinase) (CDKL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9000130] [evidence TAS]; The establishment of the sex of an organism by physical differentiation [goid 7548] [pmid 9000130] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KKIAMRE; P56	
Homo sapiens	RefSeq	NM_003948.2	ILMN_172643	CDKL2	NM_003948.3	NM_003948.3		8999	125987600	NM_003948.3	CDKL2	NP_003939.1	ILMN_1782441	0007380647	S	1751	GCGTGGCAATTCCCCCACTTACACACAATCTTTCTGCAGTTGCTCCCAGC	4	-	76741189-76741238	4q21.1a	Homo sapiens cyclin-dependent kinase-like 2 (CDC2-related kinase) (CDKL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9000130] [evidence TAS]; The establishment of the sex of an organism by physical differentiation [goid 7548] [pmid 9000130] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KKIAMRE; P56	KKIAMRE; P56
Homo sapiens	RefSeq	NM_006688.3	ILMN_28916	C1QL1	NM_006688.3	NM_006688.3		10882	34222385	NM_006688.3	C1QL1	NP_006679.1	ILMN_1716957	0006770121	S	1264	TACAATAGGACTGTTTACTGCCCACCTCCGCCTGCCAGCCCACCCCAGCC	17	-	43037247-43037296	17q21.31d	Homo sapiens complement component 1, q subcomponent-like 1 (C1QL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [pmid 9878755] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C1QRF; CRF	C1QRF; CRF
Homo sapiens	RefSeq	NM_181874.1	ILMN_19112	GRM7	NM_181874.1	NM_181874.1		2917	32528267	NM_181874.1	GRM7	NP_870989.1	ILMN_1696060	0000770328	I	2890	CTTGGTACACTATCCCACCAACAGTATAGCTTTTGACTGCTTTCCCAAAG	3	+	7703086-7703114:7703115-7703135	3p26.1b-p26.1a	Homo sapiens glutamate receptor, metabotropic 7 (GRM7), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9473604] [evidence TAS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [pmid 12052533] [evidence TAS]; The membrane portion of the presynaptic active zone; it is the site where docking and fusion of synaptic vesicles occurs for the release of neurotransmitters [goid 48787] [pmid 12052533] [evidence TAS]	A conditioned aversion to a specific chemical compound as a result of that compound being coupled with a noxious stimulus [goid 1661] [evidence IEA]; An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 9473604] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9473604] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA];  [goid 5246] [evidence IEA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 12052533] [evidence TAS]	GPRC1G; GLUR7; mGlu7; FLJ40498; MGLUR7	GPRC1G; GLUR7; mGlu7; FLJ40498; MGLUR7
Homo sapiens	Unigene	Hs.279770	ILMN_84463	HS.279770	Hs.279770		Hs.279770		5632633	AI912778			ILMN_1856685	0002510767	S	137	GTCACCCTCATCTGAAACGTGTAGGACTGCAAGGGAATGTGTTGGGGGGT	19	+	57989046-57989095		we13e11.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2341004 3, mRNA sequence					
Homo sapiens	RefSeq	XM_937968.1	ILMN_34941	LOC401115	XM_937968.2	XM_937968.2		401115	113415961	XM_937968.2	LOC401115	XP_943061.1	ILMN_1668629	0006280167	A	408	AGCGGGGCACTGAGGACCACGCTGCTCCGTGTGAATAAATGCCCAGTGGC				4p16.3b	PREDICTED: Homo sapiens hypothetical gene supported by BC038466; BC062790 (LOC401115), mRNA.					
Homo sapiens	RefSeq	XM_928006.1	ILMN_39433	LOC644919	XM_928006.1	XM_928006.1		644919	89037320	XM_928006.1	LOC644919	XP_933099.1	ILMN_1679106	0006290397	S	205	ATCTTGGCTCCTCCGCATTTGTTTTTATGGTGGTTTTGTATTGTTTTTAT	14	+	40493876-40493907:40501745-40501762		PREDICTED: Homo sapiens hypothetical protein LOC644919 (LOC644919), mRNA.					
Homo sapiens	RefSeq	NM_020920.1	ILMN_3472	CHD8	NM_020920.2	NM_020920.2		57680	114326454	NM_020920.2	CHD8	NP_065971.2	ILMN_1806122	0001170564	S	7016	GGCCCCATTGCTTGGGCGGCTGCTGTATTTTCATTTACTCTGGCCCTTGG	14	-	21853709-21853758	14q11.2c	Homo sapiens chromodomain helicase DNA binding protein 8 (CHD8), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16949368] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence NAS]	KIAA1564; DKFZp686N17164; HELSNF1	KIAA1564; DKFZp686N17164; HELSNF1
Homo sapiens	RefSeq	XM_935642.1	ILMN_137630	PDGFA	XM_935642.1	XM_935642.1		5154	89026752	XM_935642.1	PDGFA	XP_940735.1	ILMN_1782661	0006130333	I	622	TCCTTTTATGGAGAGAGGAAGGCTGGGGCCCTGGATCCGAACCGTGGAGA				7p22.3d-p22.3c	PREDICTED: Homo sapiens platelet-derived growth factor alpha polypeptide, transcript variant 3 (PDGFA), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 287022] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3754619] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 2836953] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 291037] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membrane of the platelet dense granule [goid 31089] [pmid 287022] [evidence EXP]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand [goid 1775] [pmid 10508235] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2842868] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 10508235] [evidence TAS]; Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol [goid 10512] [pmid 2538439] [evidence IDA]; Any process that decreases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue [goid 10544] [pmid 2538439] [evidence IDA]; Any process that modulates the frequency, rate or extent of smooth muscle cell migration [goid 14910] [pmid 9409235] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 17470632] [evidence IDA]; Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 32956] [pmid 10508235] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 10508235] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 2836953] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 2439522] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 10806482] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 2836953] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 2536956] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 2439522] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 2439522] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 10806482] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [pmid 9409235] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 2836953] [evidence IDA]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 2536956] [evidence IPI]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 2439522] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 3754619] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 2836953] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 2836953] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 291037] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 2538439] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 7073684] [evidence IPI]; Interacting selectively with platelet-derived growth factor [goid 48407] [pmid 7073684] [evidence IPI]		
Homo sapiens	Unigene	Hs.576825	ILMN_129006	HS.576825	Hs.576825		Hs.576825		5433022	AL044810			ILMN_1831563	0002680201	S	421	TGGATACCTCATCTCTCCTGTTTCGCCAAGGTCTTGACTCATCGCTGCAG	10	+	6703783-6703829:6707285-6707287		DKFZp434O1935_r1 434 (synonym: htes3) Homo sapiens cDNA clone DKFZp434O1935 5, mRNA sequence					
Homo sapiens	RefSeq	NM_004156.2	ILMN_21592	PPP2CB	NM_004156.2	NM_004156.2		5516	57634540	NM_004156.2	PPP2CB	NP_004147.1	ILMN_1712659	0003940528	A	1095	TTCAATTTGACCCAGCGCCTCGTCGTGGTGAGCCTCATGTTACACGGCGC	8	-	30763313-30763362	8p12e	Homo sapiens protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform (PPP2CB), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 8206937] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 2849765] [evidence TAS]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8206937] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PP2CB	PP2CB
Homo sapiens	RefSeq	NM_004156.2	ILMN_21592	PPP2CB	NM_004156.2	NM_004156.2		5516	57634540	NM_004156.2	PPP2CB	NP_004147.1	ILMN_1768582	0006840280	A	1425	TGGACTGTTCAAGCAAAAAAGGTAACTAACTGCTTCATCTCCTTTTGCGC	8	-	30762983-30763032	8p12e	Homo sapiens protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform (PPP2CB), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 8206937] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 2849765] [evidence TAS]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8206937] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PP2CB	PP2CB
Homo sapiens	RefSeq	NM_004381.4	ILMN_371897	ATF6B	NM_004381.4	NM_004381.4		1388	209954786	NM_004381.4	ATF6B	NP_004372.3	ILMN_3194911	0004640110	A	2187	CCAGGTGGCCAGGTGGGACTGTTTCAAATTTCCCTGATCCCCAGGCTTGG	6	-	32083424-32083473	6p21.32b	Homo sapiens activating transcription factor 6 beta (ATF6B), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	XR_016832.1	ILMN_171193	LOC343184	XR_016832.1	XR_016832.1		343184	113408611	XR_016832.1	LOC343184		ILMN_3274601	0000650377	M	802	GAATTCAATGACCACCTCGTCAAGACCCACGCCAGAGTCTCCATGCCGCG	1	+	50565192-50565241	1p33a	PREDICTED: Homo sapiens misc_RNA (LOC343184), miscRNA.					
Homo sapiens	Unigene	Hs.327917	ILMN_86277	HS.327917	Hs.327917		Hs.327917		27837158	BX111675			ILMN_1891725	0006560161	S	30	GTGTTGGTGGTAAAGGGATGGGAAACGTGTGTTGCCAAGGAGTTCCCAGC	1	+	8280798-8280847		BX111675 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGp998C235337, mRNA sequence					
Homo sapiens	RefSeq	XM_938839.1	ILMN_164855	LOC731196	XM_001128785.1	XM_001128785.1		731196	113423121	XM_001128785.1	LOC731196	XP_001128785.1	ILMN_1800103	0003060243	S	293	GGAGAATGGGGAAACTAGGATTTGCGTGTTCAAGGGCGGACAAGCCAGTC					PREDICTED: Homo sapiens similar to Proprotein convertase subtilisin/kexin type 7 precursor (Proprotein convertase PC7) (Subtilisin/kexin-like protease PC7) (Prohormone convertase PC7) (PC8) (hPC8) (Lymphoma proprotein convertase) (LOC731196), mRNA.					
Homo sapiens	RefSeq	XM_932454.1	ILMN_164855	LOC731196	XM_001128785.1	XM_001128785.1		731196	113423121	XM_001128785.1	LOC731196	XP_001128785.1	ILMN_1653185	0003830068	A	1044	AGACGAAGTGGAAACAGAGAGCAGGGGCCCTCCCACCACCTCTGACCTCC					PREDICTED: Homo sapiens similar to Proprotein convertase subtilisin/kexin type 7 precursor (Proprotein convertase PC7) (Subtilisin/kexin-like protease PC7) (Prohormone convertase PC7) (PC8) (hPC8) (Lymphoma proprotein convertase) (LOC731196), mRNA.					
Homo sapiens	RefSeq	NM_016094.2	ILMN_5974	COMMD2	NM_016094.2	NM_016094.2		51122	45545434	NM_016094.2	COMMD2	NP_057178.2	ILMN_1683305	0006560020	S	1201	TTTGTATTTTAAGAGTCTCATGCTCTACCGTTGGAACTAGCCAGATGGCC	3	-	150941394-150941443	3q25.1a	Homo sapiens COMM domain containing 2 (COMMD2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15799966] [evidence IPI]	HSPC042; MGC57611	HSPC042; MGC57611
Homo sapiens	RefSeq	XM_001125684.2	ILMN_168745	AREGB	XM_001125684.2	XM_001125684.2		727738	169166176	XM_001125684.2	AREGB	XP_001125684.1	ILMN_3236613	0000990376	S	1186	TGGAAGTGTATTTATTTTACAGCTCATTAAACTTTTTTAACCAAACAGAT	4	+	75709461-75709510	4q13.3e	PREDICTED: Homo sapiens amphiregulin B (AREGB), mRNA.					
Homo sapiens	RefSeq	XR_036914.1	ILMN_348683	LOC100134246	XR_036914.1	XR_036914.1		100134246	169178802	XR_036914.1	LOC100134246		ILMN_3246502	0001450450	S	4403	ATATTGGGAAAGGTTTTAGCTTTGAATTTTATCCAAGAGGTAGCTTTAAA					PREDICTED: Homo sapiens misc_RNA (LOC100134246), miscRNA.					
Homo sapiens	RefSeq	NM_003818.2	ILMN_18323	CDS2	NM_003818.2	NM_003818.2		8760	22035625	NM_003818.2	CDS2	NP_003809.1	ILMN_1790973	0000510673	S	2314	CTGAGCCCTTTCCCACATGTCTAGGCTCCAATGTCTCCTGTAGGTCCACC	20	+	5119285-5119334	20p12.3c	Homo sapiens CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 (CDS2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence NAS]	Catalysis of the reaction: CTP + phosphatidate = diphosphate + CDP-diacylglycerol [goid 4605] [pmid 9806839] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ38111	FLJ38111
Homo sapiens	RefSeq	NR_031667.1	ILMN_388727	MIR548M	NR_031667.1	NR_031667.1		100313772	269847348	NR_031667.1	MIR548M		ILMN_3308300	0006280673	S	28	GTTTTTGTCATTAAAGTAATGCAAAAGCCACAAATACCTTTGCACCAACC					Homo sapiens microRNA 548m (MIR548M), microRNA.					
Homo sapiens	RefSeq	XM_928638.1	ILMN_41637	LOC644010	XM_933014.2	XM_933014.2		644010	113416452	XM_933014.2	LOC644010	XP_938107.1	ILMN_1722092	0000460470	A	1453	CAAGAGAACTCGGCTTGGCGAAATGGCGGTGCTGGGACCCTAAGAGTGAC	5	+	43102499-43102548	5p12c	PREDICTED: Homo sapiens hypothetical LOC644010, transcript variant 2 (LOC644010), mRNA.					
Homo sapiens	Unigene	Hs.558072	ILMN_113091	HS.558072	Hs.558072		Hs.558072		27694363	BC043009			ILMN_1861057	0000540279	S	649	AGAGGCCATGAGAGCCACCCCGTCACAAGGAGCTTTTCCACACCTGCCAT	10	-	33216672-33216721		Homo sapiens hypothetical protein LOC338620, mRNA (cDNA clone IMAGE:6023208), partial cds					
Homo sapiens	RefSeq	NM_153686.4	ILMN_12683	LCORL	NM_153686.5	NM_153686.5		254251	144922710	NM_153686.5	LCORL	NP_710153.2	ILMN_1730085	0006060286	S	1318	CCTGACCCATGAGCAGTTGTAAAACAGGTGGATACCAACTACCTCGAAGC	4	-	17456036-17456085	4p15.32b	Homo sapiens ligand dependent nuclear receptor corepressor-like (LCORL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ30696; MLR1	FLJ30696; MLR1
Homo sapiens	RefSeq	NM_001127709.1	ILMN_364301	PRG4	NM_001127709.1	NM_001127709.1		10216	189181721	NM_001127709.1	PRG4	NP_001121181.1	ILMN_3304072	0000460014	M	3304	CCACCATCTCCAGCTCGCAGAATTACTGAAGTTTGGGGTATTCCTTCCCC	1	+	186280198-186280247	1q31.1a	Homo sapiens proteoglycan 4 (PRG4), transcript variant C, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10545950] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_000765.2	ILMN_15765	CYP3A7	NM_000765.2	NM_000765.2		1551	13386504	NM_000765.2	CYP3A7	NP_000756.1	ILMN_1685043	0006040086	S	1581	GGCTGAGTCAAGGGATGAGACCGTAAGTGGAGCCTGATTTCCCTAAGGAC	7	-	99303109-99303122:99303123-99303158	7q22.1b	Homo sapiens cytochrome P450, family 3, subfamily A, polypeptide 7 (CYP3A7), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 2722762] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	P450-HFLA; CP37	P450-HFLA; CP37
Homo sapiens	RefSeq	NM_032259.1	ILMN_26740	WDR24	NM_032259.2	NM_032259.2		84219	142357093	NM_032259.2	WDR24	NP_115635.1	ILMN_1761442	0002680630	S	2980	CAGCATGTGTGCCGTCTGCCACCACGTAGTCAAGGGTCTCTTCGTGTGGT	16	-	734837-734886	16p13.3f	Homo sapiens WD repeat domain 24 (WDR24), mRNA.				JFP7; DKFZp434F054	JFP7; DKFZp434F054
Homo sapiens	RefSeq	NM_030787.1	ILMN_24836	CFHR5	NM_030787.2	NM_030787.2		81494	142362265	NM_030787.2	CFHR5	NP_110414.1	ILMN_1718248	0005310292	S	2418	CTTTCGGGGACACATTCAAACCACAGGAGAAACTCAAATTGTTCCTGGGC	1	+	195245053-195245102	1q31.3c	Homo sapiens complement factor H-related 5 (CFHR5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11058592] [evidence NAS]	Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [pmid 11058592] [evidence NAS]		FHR-5; CFHL5; MGC133240; FLJ10549; FHR5	FHR-5; CFHL5; MGC133240; FLJ10549; FHR5
Homo sapiens	RefSeq	XM_942595.1	ILMN_137760	EIF1AX	XM_942595.1	XM_942595.1		1964	89060641	XM_942595.1	EIF1AX	XP_947688.1	ILMN_1770895	0002260056	A	44	GACGCAGGGGTAAGAATGAGAATGAATCTGAAAAAAGAGAACTGGTATTC				Xp22.12b	PREDICTED: Homo sapiens eukaryotic translation initiation factor 1A, X-linked (EIF1AX), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [pmid 8106356] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]		
Homo sapiens	RefSeq	NM_000412.2	ILMN_17942	HRG	NM_000412.2	NM_000412.2		3273	13518024	NM_000412.2	HRG	NP_000403.1	ILMN_2193936	0000940538	S	1744	GGCCTGAGAAGAGAGATCAAATGGAAAGGAGAGGAAAGAACTCAGTGCTG	3	+	186395815-186395864	3q27.3a	Homo sapiens histidine-rich glycoprotein (HRG), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 6414553] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 6414553] [evidence EXP]		 [goid 4869] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	HRGP; DKFZp779H1622; HPRG	HRGP; DKFZp779H1622; HPRG
Homo sapiens	RefSeq	NM_000412.2	ILMN_17942	HRG	NM_000412.2	NM_000412.2		3273	13518024	NM_000412.2	HRG	NP_000403.1	ILMN_1807339	0000990091	S	1439	TCCTGAGGCCAATTTTCCCAGCTTCCCATTGCCGCACCACAAACATCCTC	3	+	186395510-186395559	3q27.3a	Homo sapiens histidine-rich glycoprotein (HRG), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 6414553] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 6414553] [evidence EXP]		 [goid 4869] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	HRGP; DKFZp779H1622; HPRG	HRGP; DKFZp779H1622; HPRG
Homo sapiens	RefSeq	XM_931907.1	ILMN_34429	DDX12	XM_931907.1	XM_931907.1		440081	89035334	XM_931907.1	DDX12	XP_937000.1	ILMN_1657374	0001850451	I	496	CGTTGCTACAAGCTGTTTTTTGAATGTCTCTACACAGTCCAGGCAGGAAG	12	-	9474696-9474745	12p13.31a	PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 19 (DDX12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]		
Homo sapiens	RefSeq	NM_001013688.1	ILMN_21818	LOC401620	NM_001013688.1	NM_001013688.1		401620	61966826	NM_001013688.1	LOC401620	NP_001013710.1	ILMN_1809550	0000070066	S	2665	GGAAGGGAATCAGAACTCAAAGTAAGATCAATGTGGCCAGGTGCGGTGGC	X	+	151017884-151017933		Homo sapiens similar to LINE-1 reverse transcriptase homolog (LOC401620), mRNA.					
Homo sapiens	RefSeq	NR_024092.1	ILMN_366023	C21ORF71	NR_024092.1	NR_024092.1		282566	197116383	NR_024092.1	C21orf71		ILMN_3246107	0004640711	S	118	GTTGAACGGAGCAGTGATGTGGTTTTCAAGGCAGCAGTGGCAGAGGTCCC	21	-	26955369-26955418		Homo sapiens chromosome 21 open reading frame 71 (C21orf71), non-coding RNA.					
Homo sapiens	RefSeq	XM_926194.1	ILMN_36871	LOC642772	XM_926194.1	XM_926194.1		642772	89040348	XM_926194.1	LOC642772	XP_931287.1	ILMN_1668554	0000060440	S	61	GCCCCGCAGGACCACGGGGTCACAGCTCCATACAGAAGCCTCCTAGTAAT	16	-	35000257-35000306		PREDICTED: Homo sapiens hypothetical protein LOC642772 (LOC642772), mRNA.					
Homo sapiens	RefSeq	XM_001716523.1	ILMN_340179	LOC100130348	XM_001716523.1	XM_001716523.1		100130348	169203533	XM_001716523.1	LOC100130348	XP_001716575.1	ILMN_3259120	0001430228	M	1001	TGTGCAGCTCAAACCAGCTGAGGCGCACGACTGTATTCTGGAAACCACAG				11q13.1c	PREDICTED: Homo sapiens similar to rCG48429 (LOC100130348), mRNA.					
Homo sapiens	Unigene	Hs.539306	ILMN_104436	HS.539306	Hs.539306		Hs.539306		13742872	BG216851			ILMN_1852785	0000580167	S	99	CAGCGGGAAAAACTCACTTCCACCCCTGATGATTCCATCACCAACCTGAC					RST36550 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_939498.1	ILMN_35000	LOC650412	XM_939498.1	XM_939498.1		650412	89061681	XM_939498.1	LOC650412	XP_944591.1	ILMN_1813116	0007560168	S	12109	CTGAAGCCGCTGTCGAAATGGGTCGAGGATCTGGTGCGGCGTGTTCACTT					PREDICTED: Homo sapiens similar to dynein heavy chain, putative (LOC650412), mRNA.					
Homo sapiens	RefSeq	NM_153181.2	ILMN_19058	NETO1	NM_153181.2	NM_153181.2		81832	23510395	NM_153181.2	NETO1	NP_694821.2	ILMN_2357086	0003390341	A	254	TCTTTACCTCTCCCAACTATCCCAGCAAGTATCCCCCTGACCGGGAATGC	18	-	70532058-70532107	18q22.3b	Homo sapiens neuropilin (NRP) and tolloid (TLL)-like 1 (NETO1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BCTL1; BTCL1	BCTL1; BTCL1
Homo sapiens	RefSeq	NM_138999.1	ILMN_19058	NETO1	NM_153181.2	NM_153181.2		81832	23510395	NM_153181.2	NETO1	NP_694821.2	ILMN_1783168	0005690689	A	287	CCCCTGACCGGGAATGCATCTACATCATAGAAGCCGCTCCAAGACAGTGC	18	-	70526292-70526309:70532043-70532074	18q22.3b	Homo sapiens neuropilin (NRP) and tolloid (TLL)-like 1 (NETO1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BCTL1; BTCL1	BCTL1; BTCL1
Homo sapiens	RefSeq	XM_929413.1	ILMN_34646	LOC646491	XM_929413.1	XM_929413.1		646491	88992636	XM_929413.1	LOC646491	XP_934506.1	ILMN_1739864	0001510678	S	3264	AGCCCACCCCTTGCACCAGTGTGCCCTGGATGTGAGATATGGAGTCAAAG	6	-	30359369-30359418		PREDICTED: Homo sapiens hypothetical protein LOC646491 (LOC646491), mRNA.					
Homo sapiens	RefSeq	XM_933349.1	ILMN_41838	LOC646033	XM_933349.1	XM_933349.1		646033	89024800	XM_933349.1	LOC646033	XP_938442.1	ILMN_1712789	0007570239	S	126	ACCAATAATGTCTCAGGAAACACTGGACAAGCTGTTTGGGCTCTCTAGCC	7	+	9967307-9967313:9967314-9967317:9967437-9967475		PREDICTED: Homo sapiens hypothetical protein LOC646033 (LOC646033), mRNA.					
Homo sapiens	Unigene	Hs.505364	ILMN_97564	HS.505364	Hs.505364		Hs.505364		10435407	AK023464			ILMN_1827779	0005820102	S	2933	GTCAGGAGTGGCCCTAGGAGATTTGTGGGTTTTGGCCTGTCTTGTTTCTC	12	+	45071841-45071890		Homo sapiens cDNA FLJ13402 fis, clone PLACE1001456					
Homo sapiens	RefSeq	NM_018358.1	ILMN_7798	ABCF3	NM_018358.2	NM_018358.2		55324	148612852	NM_018358.2	ABCF3	NP_060828.2	ILMN_1810085	0004560689	S	2250	AAGGCTTCCTCTAGGGCCACCAGGCTGAGGACTCGCCCAGGACATGGACT	3	+	183911473-183911486:183911487-183911522	3q27.1b	Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 3 (ABCF3), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	EST201864; FLJ11198	EST201864; FLJ11198
Homo sapiens	RefSeq	NM_152794.2	ILMN_177678	HIF3A	NM_152794.2	NM_152794.2		64344	90421314	NM_152794.2	HIF3A	NP_690007.1	ILMN_2265623	0002970692	I	17	CGCCACAGAGAGGAGCGAGGCGCCAGAGGCACCATGGACTGGCAAGACCA	19	+	46806892-46806924:46806925-46806941	19q13.32b	Homo sapiens hypoxia inducible factor 3, alpha subunit (HIF3A), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	IPAS; HIF-3A; MOP7; HIF-3A4; PASD7	IPAS; HIF-3A; MOP7; HIF-3A4; PASD7
Homo sapiens	RefSeq	XM_945271.1	ILMN_138283	CDV3	XM_945271.1	XM_945271.1		55573	88970907	XM_945271.1	CDV3	XP_950364.1	ILMN_1776158	0004570273	I	890	TCCAGAAGGGAGGAAAGGGGGAGGGCAAAGAGCATTGGAGACACTTTGTC				3q22.1d	PREDICTED: Homo sapiens CDV3 homolog (mouse), transcript variant 3 (CDV3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10497265] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10497265] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10497265] [evidence ND ]		
Homo sapiens	RefSeq	NM_015722.2	ILMN_16091	DRD1IP	NM_015722.2	NM_015722.2		50632	9257200	NM_015722.2	DRD1IP	NP_056537.1	ILMN_1771622	0000940746	S	863	CCCCCGTGGGTCTCTGACTCTGTCGCTTTTCTCTAAGTAAAGATTTCACG	10	-	134988924-134988973	10q26.3f	Homo sapiens dopamine receptor D1 interacting protein (DRD1IP), mRNA.				RP11-122K13.5	RP11-122K13.5
Homo sapiens	RefSeq	NM_002967.2	ILMN_24704	SAFB	NM_002967.2	NM_002967.2		6294	21264342	NM_002967.2	SAFB	NP_002958.2	ILMN_1722059	0005270731	S	2764	GCAGGCCCAGCGATGCCCGCTTCACTCGCCGCTACTGAGTACTTGGAATC	19	+	5619265-5619302:5619303-5619314	19p13.3b	Homo sapiens scaffold attachment factor B (SAFB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1324173] [evidence TAS]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [pmid 1324173] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 1324173] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	DKFZp779C1727; SAFB1; HET; HAP	DKFZp779C1727; SAFB1; HET; HAP
Homo sapiens	RefSeq	NR_031742.1	ILMN_388662	MIR1978	NR_031742.1	NR_031742.1		100302173	269847680	NR_031742.1	MIR1978		ILMN_3310491	0000770743	S	1	AGACGGGCTCACATCACCCCATAAACAAATAGGTTTGGTCCTAGCCTTTC					Homo sapiens microRNA 1978 (MIR1978), microRNA.					
Homo sapiens	RefSeq	XM_001715019.1	ILMN_345980	LOC100131154	XM_001715019.1	XM_001715019.1		100131154	169217406	XM_001715019.1	LOC100131154	XP_001715071.1	ILMN_3211833	0005890228	A	1401	GTACCCCACACGTACTTTGAACCGAGGAGTCCTCAGCTGCCTGGAGCCAT					PREDICTED: Homo sapiens similar to hCG1818167 (LOC100131154), mRNA.					
Homo sapiens	RefSeq	NM_201286.2	ILMN_27241	USP51	NM_201286.2	NM_201286.2		158880	69885216	NM_201286.2	USP51	NP_958443.1	ILMN_1740413	0000870463	S	1962	CTAAAGAGAGCAGAATGAAAGAAGGCCAGCCACCAACAGATTGTGTGCCC	X	-	55530165-55530214	Xp11.21a	Homo sapiens ubiquitin specific peptidase 51 (USP51), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_145183.1	ILMN_5073	PYCARD	NM_013258.3	NM_013258.3		29108	22035618	NM_013258.3	PYCARD	NP_037390.2	ILMN_1698766	0006860687	A	623	ACGTTGAGTGGCTGCTGGATGCTCTGTACGGGAAGGTCCTGACGGATGAG	16	-	31213061-31213110	16p11.2c	Homo sapiens PYD and CARD domain containing (PYCARD), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12019269] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A protein serine/threonine kinase that phosphorylates IkappaB, thereby targeting this for proteasomal degradation and allowing the nuclear translocation of kB. Composed of alpha, beta and gamma subunits, the latter not having kinase activity but presumed to play a regulatory role [goid 8385] [pmid 12656673] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10567338] [evidence TAS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 12019269] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 12019269] [evidence NAS]; A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [pmid 12656673] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [pmid 15030775] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 12656673] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12019269] [evidence IPI]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [pmid 12019269] [evidence NAS]; Interacting selectively with a Pyrin (PAAD/DAPIN) domain, a protein-protein interaction domain that has the same fold as the Death domain [goid 32090] [pmid 15030775] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15030775] [evidence IDA]	TMS1; MGC10332; ASC; CARD5	TMS1; MGC10332; ASC; CARD5
Homo sapiens	RefSeq	NM_006294.2	ILMN_26282	UQCRB	NM_006294.2	NM_006294.2		7381	20070231	NM_006294.2	UQCRB	NP_006285.1	ILMN_2128489	0000520681	S	731	GGGGGTATGCACCCCCTAGTTTGCCAAGATTGAGAAATAGCCTCTTCACT	8	-	97312067-97312116	8q22.1d	Homo sapiens ubiquinol-cytochrome c reductase binding protein (UQCRB), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [pmid 3056408] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]; The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [pmid 3056408] [evidence TAS]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [pmid 3056408] [evidence TAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]	UQPC; UQBC; UQBP; QP-C; QCR7; QPC	UQPC; UQBC; UQBP; QP-C; QCR7; QPC
Homo sapiens	RefSeq	NM_006294.2	ILMN_26282	UQCRB	NM_006294.2	NM_006294.2		7381	20070231	NM_006294.2	UQCRB	NP_006285.1	ILMN_1759453	0003830746	S	24	CAGAAGGCAACGCTTCTCTTTCTGGTCAAAATGGCTGGTAAGCAGGCCGT	8	-	97314630-97314631:97316916-97316934:97316935-97316963	8q22.1d	Homo sapiens ubiquinol-cytochrome c reductase binding protein (UQCRB), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [pmid 3056408] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]; The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [pmid 3056408] [evidence TAS]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [pmid 3056408] [evidence TAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]	UQPC; UQBC; UQBP; QP-C; QCR7; QPC	UQPC; UQBC; UQBP; QP-C; QCR7; QPC
Homo sapiens	RefSeq	NM_001041.1	ILMN_171282	SI	NM_001041.1	NM_001041.1		6476	4506944	NM_001041.1	SI	NP_001032.1	ILMN_2045849	0001430086	S	5585	CCAGGATTTAAGTTTCACAGCACTTACAATTTTCCCTCTTCACTTGGTTC	3	-	166179755-166179804	3q26.1d	Homo sapiens sucrase-isomaltase (alpha-glucosidase) (SI), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 1717481] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [pmid 1717481] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of 1,6-alpha-D-glucosidic linkages in some oligosaccharides produced from starch and glycogen by alpha-amylase, and in isomaltose [goid 4574] [evidence IEA]; Catalysis of the hydrolysis of sucrose and maltose by an alpha-D-glucosidase-type action [goid 4575] [evidence IEA]	MGC131621; MGC131622	MGC131621; MGC131622
Homo sapiens	RefSeq	NM_145755.1	ILMN_23448	TTC21A	NM_145755.1	NM_145755.1		199223	21955236	NM_145755.1	TTC21A	NP_665698.1	ILMN_1715332	0000580240	S	3894	AGGATGCAGTCACCAACTACAAACTGGCCTGGAAGTACAGTCATCACGCC	3	+	39154821-39154870	3p22.2a	Homo sapiens tetratricopeptide repeat domain 21A (TTC21A), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	STI2; MGC70523; DKFZp686P18239; MGC156293	STI2; MGC70523; DKFZp686P18239; MGC156293
Homo sapiens	RefSeq	NM_001005328.1	ILMN_5880	OR2A7	NM_001005328.1	NM_001005328.1		401427	52693944	NM_001005328.1	OR2A7	NP_001005328.1	ILMN_2295747	0000520743	I	427	CTCGCGGTGACTTCCTGGACCACTGGAGTCCTTTTATCCTTGATTCATCT	7	-	143956245-143956294	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 7 (OR2A7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	HSDJ0798C17; OR2A21	OR2A21; HSDJ0798C17
Homo sapiens	RefSeq	NM_032366.2	ILMN_175846	C16ORF13	NM_001040162.1	NM_001040162.1		84326	93102394	NM_001040162.1	C16orf13	NP_001035252.1	ILMN_1774990	0000160358	S	431	GGAAAAACTAAGCCCCTCCTTCACCCCCGCACACCTGCATCCCTGCCGGA	16	-	684557-684596:684597-684606	16p13.3f	Homo sapiens chromosome 16 open reading frame 13 (C16orf13), transcript variant 4, mRNA.				JFP2; MGC13114	JFP2
Homo sapiens	RefSeq	XM_939186.1	ILMN_40984	GPSM1	XM_939186.2	XM_939186.2		26086	113421252	XM_939186.2	GPSM1	XP_944279.2	ILMN_1709307	0006280100	I	3060	TTGCTCACGTCTGTGCCATGTTGTCAATGGGTCCTTTCCAACCCAAGAGG				9q34.3d	PREDICTED: Homo sapiens G-protein signalling modulator 1 (AGS3-like, C. elegans) (GPSM1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XM_936107.1	ILMN_33847	LOC642037	XM_936107.1	XM_936107.1		642037	88998657	XM_936107.1	LOC642037	XP_941200.1	ILMN_1672360	0000160477	S	1	ATGACGCATAGGGCTGCTATGACCATTTGGGAGTGTGAGCATCCTCCTGG					PREDICTED: Homo sapiens hypothetical protein LOC642037 (LOC642037), mRNA.					
Homo sapiens	Unigene	Hs.544070	ILMN_107552	HS.544070	Hs.544070		Hs.544070		19585702	BM968115			ILMN_1862365	0004250348	S	234	TTCTGGTGGCAACTTTCTCCCAGCAATTTCTCCTCAAGGCCAGGGGGAAG	5	-	73650061-73650110		UI-CF-DU1-aao-a-03-0-UI.s1 UI-CF-DU1 Homo sapiens cDNA clone UI-CF-DU1-aao-a-03-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000209.1	ILMN_25809	IPF1	NM_000209.1	NM_000209.1		3651	4557672	NM_000209.1	IPF1	NP_000200.1	ILMN_1742993	0002360372	S	1239	CGCACATCCCTGCCCTCCTACAGCACTCCACCTTGGGACCTGTTTAGAGA	13	+	27397126-27397175	13q12.2b	Homo sapiens insulin promoter factor 1, homeodomain transcription factor (IPF1), mRNA.				IDX-1; IUF1; STF-1; MODY4; PDX-1; PDX1	IDX-1; IUF1; STF-1; MODY4; PDX-1; PDX1
Homo sapiens	RefSeq	NM_152510.1	ILMN_11349	HORMAD2	NM_152510.2	NM_152510.2		150280	142376243	NM_152510.2	HORMAD2	NP_689723.1	ILMN_1679139	0006040161	S	1505	ATTGTGGGACCAAAATGTGCCCTGCCTCAACTCTGGCCCCAGGCCCTGTT	22	+	28902672-28902721	22q12.2b	Homo sapiens HORMA domain containing 2 (HORMAD2), mRNA.		Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]		MGC26710	MGC26710
Homo sapiens	Unigene	Hs.548787	ILMN_109906	HS.548787	Hs.548787		Hs.548787		21391490	AY063454			ILMN_1846043	0005720603	S	193	CTACAGCCTAAGACACCCTGAGCCAGAACCATCCAGCTAAGCCCCTCGCA	21	+	30384098-30384147		Homo sapiens D21S2090E mRNA sequence					
Homo sapiens	RefSeq	NM_207123.1	ILMN_17932	GAB1	NM_207123.1	NM_207123.1		2549	46370070	NM_207123.1	GAB1	NP_997006.1	ILMN_1666910	0000840086	I	1830	GACTCAAACCCCATGGTTTAGAGCGAACTGATTCACAAACCATAGGTGAC	4	+	144598304-144598353	4q31.21c	Homo sapiens GRB2-associated binding protein 1 (GAB1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9356464] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15574420] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14560030] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10734310] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10913131] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11606067] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14665621] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10648629] [evidence EXP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 8596638] [evidence TAS]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8596638] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 8596638] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8596638] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9658397] [evidence IPI]		
Homo sapiens	RefSeq	NM_207123.1	ILMN_17932	GAB1	NM_207123.1	NM_207123.1		2549	46370070	NM_207123.1	GAB1	NP_997006.1	ILMN_1781672	0006660470	A	2920	TGTTGCCTTCCAAAATGCTGAGGATAATGTATGTACTGGTGTCAGGACCT	4	+	144610314-144610363	4q31.21c	Homo sapiens GRB2-associated binding protein 1 (GAB1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9356464] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15574420] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14560030] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10734310] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10913131] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11606067] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14665621] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10648629] [evidence EXP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 8596638] [evidence TAS]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8596638] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 8596638] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8596638] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9658397] [evidence IPI]		
Homo sapiens	RefSeq	XM_936221.1	ILMN_31626	LOC653876	XM_936221.1	XM_936221.1		653876	89034693	XM_936221.1	LOC653876	XP_941314.1	ILMN_1758657	0001570463	S	1	ATGGGGTGCATTGGAGAAATCAAGCGCAGCAACACTTCCGAAACACCGGA					PREDICTED: Homo sapiens similar to neuron navigator 2 isoform 2 (LOC653876), mRNA.					
Homo sapiens	RefSeq	XM_931236.1	ILMN_38938	LOC653125	XM_931236.1	XM_931236.1		653125	89038164	XM_931236.1	LOC653125	XP_936329.1	ILMN_1732291	0007160682	I	967	AGGACCACAAGGAGCACCCAGGCTTGGGCAGCAACTGCTGTGTGCCATTA	15	-	30472310-30472359	15q13.3c	PREDICTED: Homo sapiens similar to Golgi autoantigen, golgin subfamily A member 2 (Golgi matrix protein GM130), transcript variant 2 (LOC653125), mRNA.					
Homo sapiens	RefSeq	NM_001013632.2	ILMN_168255	TCTEX1D4	NM_001013632.2	NM_001013632.2		343521	62899058	NM_001013632.2	TCTEX1D4	NP_001013654.1	ILMN_2204526	0004120181	S	285	CGGGTGGAAGGGAGAAATGGCAGTCTCTAAGACTCCGAGCGTACCTGGCT	1	-	45272623-45272672	1p34.1d	Homo sapiens Tctex1 domain containing 4 (TCTEX1D4), mRNA.					
Homo sapiens	RefSeq	NM_207172.1	ILMN_16921	NPSR1	NM_207172.1	NM_207172.1		387129	46395495	NM_207172.1	NPSR1	NP_997055.1	ILMN_1720468	0006510678	I	1472	ACCATTCCCAGCCCTCCTTCCCACTGGCCAGCACCTGAACCCAGTGAACA	7	+	34851107-34851119:34851382-34851418	7p14.3a	Homo sapiens neuropeptide S receptor 1 (NPSR1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]	GPR154; PGR14; ASRT2; NPSR; VRR1; GPRA	GPR154; PGR14; ASRT2; NPSR; VRR1; GPRA
Homo sapiens	RefSeq	NM_207172.1	ILMN_16921	NPSR1	NM_207172.1	NM_207172.1		387129	46395495	NM_207172.1	NPSR1	NP_997055.1	ILMN_1704206	0004480458	A	1099	CCATCAACCCCCTCATCTACTGTGTCTTCAGCAGCTCCATCTCTTTCCCC	7	+	34818158-34818177:34833538-34833567	7p14.3a	Homo sapiens neuropeptide S receptor 1 (NPSR1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [evidence IEA]	GPR154; PGR14; ASRT2; NPSR; VRR1; GPRA	GPR154; PGR14; ASRT2; NPSR; VRR1; GPRA
Homo sapiens	RefSeq	NM_001013706.1	ILMN_28899	LOC440503	NM_001013706.1	NM_001013706.1		440503	61966858	NM_001013706.1	LOC440503	NP_001013728.1	ILMN_1791467	0003290482	S	1367	CTAAGGGCATATAGGGCTTTTAGACTTGAGGTCCCAAACTGGTGGCCCCC	19	-	4479825-4479874	19p13.3d	Homo sapiens similar to RIKEN cDNA 2310076L09 (LOC440503), mRNA.					
Homo sapiens	RefSeq	NM_138573.1	ILMN_26699	NRG4	NM_138573.2	NM_138573.2		145957	141801772	NM_138573.2	NRG4	NP_612640.1	ILMN_1804662	0005890121	S	478	CAACCTGGTAGAGACGAGCAGTACCAGTGCCCACCACAGTCATGAACAAC	15	-	76235981-76235995:76248273-76248307	15q24.2a	Homo sapiens neuregulin 4 (NRG4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	HRG4; DKFZp779N0541; DKFZp779N1944	DKFZp779N1944; HRG4; DKFZp779N0541
Homo sapiens	RefSeq	NM_004879.3	ILMN_8791	EI24	NM_004879.3	NM_004879.3		9538	55956765	NM_004879.3	EI24	NP_004870.3	ILMN_1726138	0005310707	I	925	TGCACCAGCGGTTGTCTAACATAGAAAGGAATTGGCCTTACTACTTTGGG	11	+	124956326-124956375	11q24.2b	Homo sapiens etoposide induced 2.4 mRNA (EI24), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9305847] [evidence TAS]		TP53I8; PIG8	TP53I8; PIG8
Homo sapiens	RefSeq	NM_198120.1	ILMN_22532	EBAG9	NM_198120.1	NM_198120.1		9166	37694064	NM_198120.1	EBAG9	NP_936056.1	ILMN_2273683	0001440739	I	78	TTGAATGAGCGGGGCTGGGAGTGAGCGGGCGGAGCGCGAGCTCGAGGAAG	8	+	110552006-110552055	8q23.2a	Homo sapiens estrogen receptor binding site associated, antigen, 9 (EBAG9), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10426319] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	 [goid 16505] [pmid 10426319] [evidence NAS]	RCAS1; EB9; PDAF	EB9; RCAS1; PDAF
Homo sapiens	RefSeq	NM_004215.3	ILMN_22532	EBAG9	NM_198120.1	NM_198120.1		9166	37694064	NM_198120.1	EBAG9	NP_936056.1	ILMN_1791896	0000160639	A	998	GGCCATCCAGGACACCACGATTCTCCCAAAGTACCTTGAACTCTTAGTGA	8	+	110576909-110576958	8q23.2a	Homo sapiens estrogen receptor binding site associated, antigen, 9 (EBAG9), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10426319] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	 [goid 16505] [pmid 10426319] [evidence NAS]	RCAS1; EB9; PDAF	EB9; RCAS1; PDAF
Homo sapiens	RefSeq	XM_001732886.1	ILMN_334544	LOC100133521	XM_001732886.1	XM_001732886.1		100133521	169217277	XM_001732886.1	LOC100133521	XP_001732938.1	ILMN_3198636	0004880414	A	958	GTGTACACGCACGTGCATACATATGTATATATGTGTACACGCACGTGCAT					PREDICTED: Homo sapiens hypothetical protein LOC100133521 (LOC100133521), mRNA.					
Homo sapiens	RefSeq	NM_152589.1	ILMN_27031	C12ORF50	NM_152589.1	NM_152589.1		160419	22749212	NM_152589.1	C12orf50	NP_689802.1	ILMN_2105298	0007160634	S	1240	GGGTCCTACAATAAAGTCCATGCTAACAGGGAACCCAAACCCAACCTCAG	12	-	88379631-88379680	12q21.32a	Homo sapiens chromosome 12 open reading frame 50 (C12orf50), mRNA.				FLJ35821	FLJ35821
Homo sapiens	RefSeq	NM_152589.1	ILMN_27031	C12ORF50	NM_152589.1	NM_152589.1		160419	22749212	NM_152589.1	C12orf50	NP_689802.1	ILMN_1715567	0004120541	S	1176	CGTTCAAAGAGATGCTGTCAGGACTGTCGCGTTGAATGCACCTTCCCGCA	12	-	88379695-88379744	12q21.32a	Homo sapiens chromosome 12 open reading frame 50 (C12orf50), mRNA.				FLJ35821	FLJ35821
Homo sapiens	RefSeq	NM_181505.1	ILMN_11681	PPP1R1B	NM_181505.1	NM_181505.1		84152	31415879	NM_181505.1	PPP1R1B	NP_852606.1	ILMN_2304495	0001940747	A	1179	GGAGGATTCCAAGTCACCACTTCTCTCACCGGCTTCTACCAGGGTCCAGG	17	+	35046082-35046131	17q12c	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 1B (dopamine and cAMP regulated phosphoprotein, DARPP-32) (PPP1R1B), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10604473] [evidence TAS]; Any process that stops, prevents or reduces the receptiveness of a female to male advances [goid 7621] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [pmid 10604473] [evidence TAS]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [pmid 10604473] [evidence TAS]	DARPP-32; FLJ20940; DARPP32	DARPP-32; FLJ20940; DARPP32
Homo sapiens	RefSeq	NM_181505.1	ILMN_11681	PPP1R1B	NM_181505.1	NM_181505.1		84152	31415879	NM_181505.1	PPP1R1B	NP_852606.1	ILMN_1759012	0005720639	I	123	AGGTGGGGGGTGCCTGCAGTGCGCTGGCTCAGTCTCCTTCTGAAAAGCTG	17	+	35038401-35038450	17q12c	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 1B (dopamine and cAMP regulated phosphoprotein, DARPP-32) (PPP1R1B), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10604473] [evidence TAS]; Any process that stops, prevents or reduces the receptiveness of a female to male advances [goid 7621] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [pmid 10604473] [evidence TAS]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [pmid 10604473] [evidence TAS]	DARPP-32; FLJ20940; DARPP32	DARPP-32; FLJ20940; DARPP32
Homo sapiens	Unigene	Hs.581933	ILMN_134114	HS.581933	Hs.581933		Hs.581933		83124203	DB298112			ILMN_1898350	0006250743	S	286	CCTGTGGGTCTACATAGGCTTGCCAACAGAAGCAGCAGAAGTAGCCAGAG	4	+	37166516-37166565		DB298112 BRACE2 Homo sapiens cDNA clone BRACE2040248 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006057.1	ILMN_2114	B3GALT5	NM_006057.1	NM_006057.1		10317	5174396	NM_006057.1	B3GALT5	NP_006048.1	ILMN_1800713	0001190576	A	2513	TTAGCCTTCAGTTTGCTCCGCTGCCTCCTACCCAGAGGTTTGTGCGAGCC	21	+	39956436-39956485	21q22.2b	Homo sapiens UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 (B3GALT5), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16780588] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 16780588] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 10212226] [evidence TAS]	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [pmid 10212226] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	B3GalTx; GLCT5; beta3Gal-T5; B3GalT-V; B3T5	B3GalT-V; B3GalTx; GLCT5; beta3Gal-T5; B3T5
Homo sapiens	RefSeq	NM_145648.1	ILMN_2279	SLC15A4	NM_145648.2	NM_145648.2		121260	141802302	NM_145648.2	SLC15A4	NP_663623.1	ILMN_1679731	0006650465	S	1935	TATCCAAAGGAGCTTGGTAAGTGCCTTACTGCAGCGTGTCTCCTGGCACG	12	-	127844496-127844545	12q24.32c	Homo sapiens solute carrier family 15, member 4 (SLC15A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	PHT1; FP12591; PTR4	PHT1; FP12591; PTR4
Homo sapiens	RefSeq	XM_926058.1	ILMN_37902	LOC642571	XM_926058.1	XM_926058.1		642571	88953757	XM_926058.1	LOC642571	XP_931151.1	ILMN_1672205	0004610653	S	181	CTCCCAGATTCCAGAGGTGACTGGTTCACAGATGGAAGTAGTTTTGTGTC	2	-	153531348-153531397		PREDICTED: Homo sapiens hypothetical protein LOC642571 (LOC642571), mRNA.					
Homo sapiens	Unigene	Hs.386275	ILMN_89157	HS.386275	Hs.386275		Hs.386275		23368081	BU655899			ILMN_1848843	0001030100	S	564	TGTTCTTCCCCATGTCCTGGATGCCACTGGAAGTGCACACTGCTTGTATG	18	-	58336127-58336176		cl02h05.z1 Hembase; Erythroid Precursor Cells (LCB:cl library) Homo sapiens cDNA clone cl02h05 5, mRNA sequence					
Homo sapiens	RefSeq	NM_144601.2	ILMN_15189	CMTM3	NM_144601.2	NM_144601.2		123920	32130524	NM_144601.2	CMTM3	NP_653202.1	ILMN_1679277	0003390646	I	143	ATAGACAGCCCTTCTGGATAGGGGCAGACGGGTGGGAGCTCCGAAGGGGT	16	+	65195856-65195905	16q21e-q22.1a	Homo sapiens CKLF-like MARVEL transmembrane domain containing 3 (CMTM3), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	BNAS2; CKLFSF3; FLJ31762; MGC51956	BNAS2; MGC51956; CKLFSF3; FLJ31762
Homo sapiens	RefSeq	NM_181555.1	ILMN_15189	CMTM3	NM_144601.2	NM_144601.2		123920	32130524	NM_144601.2	CMTM3	NP_653202.1	ILMN_1705442	0003890551	A	1711	GCAGGTCTATGGGCCACTGCAGGAGATGAGACCAGCCTTCTGTGTTCACC	16	+	65204882-65204931	16q21e-q22.1a	Homo sapiens CKLF-like MARVEL transmembrane domain containing 3 (CMTM3), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	BNAS2; CKLFSF3; FLJ31762; MGC51956	MGC51956; CKLFSF3; FLJ31762
Homo sapiens	RefSeq	NM_145809.1	ILMN_307091	LOC220594	NR_003554.1	NR_003554.1		220594	147902149	NR_003554.1	LOC220594		ILMN_1704295	0005820100	S	1508	GATGCATAGCTAGATCACCAGTTTAAATGCCTTCCCACACACCCCTTTCC	17	-	18423009-18423058	17p11.2f	Homo sapiens TL132 protein (LOC220594), non-coding RNA.				FLJ98241	
Homo sapiens	RefSeq	NM_207414.1	ILMN_24679	FLJ43860	NM_207414.2	NM_207414.2		389690	148727310	NM_207414.2	FLJ43860	NP_997297.2	ILMN_1662091	0006550176	I	3816	GCACAGCCACTCCTGCCACATCAAGACCTGGGTGACACTCTTCATAGGCC	8	-	142514463-142514512	8q24.3d	Homo sapiens FLJ43860 protein (FLJ43860), mRNA.					
Homo sapiens	RefSeq	NM_207414.1	ILMN_24679	FLJ43860	NM_207414.2	NM_207414.2		389690	148727310	NM_207414.2	FLJ43860	NP_997297.2	ILMN_1698060	0004780736	A	2084	AAACAGGAGAAGCTTTGCAGGCAGAATCACAGGCCCCCAAGGAGCTCTCC	8	-	142549998-142550045:142550338-142550339	8q24.3d	Homo sapiens FLJ43860 protein (FLJ43860), mRNA.					
Homo sapiens	RefSeq	XM_940367.1	ILMN_24679	FLJ43860	NM_207414.2	NM_207414.2		389690	148727310	NM_207414.2	FLJ43860	NP_997297.2	ILMN_1659980	0002970041	A	2668	AGCGACAGCAGCCCCTGCCCCAAGGAGAAGACCTACCTGCGTTTGCTGGC	8	-	142528872-142528921	8q24.3d	Homo sapiens FLJ43860 protein (FLJ43860), mRNA.					
Homo sapiens	RefSeq	NM_053277.1	ILMN_27352	CLIC6	NM_053277.1	NM_053277.1		54102	27894377	NM_053277.1	CLIC6	NP_444507.1	ILMN_1699665	0003930424	S	3588	GGGTCTAGCACATGTCACCCTTGTCCACGTTGTTTCACATCTGGTTAGGG	21	+	35012177-35012226	21q22.12a	Homo sapiens chloride intracellular channel 6 (CLIC6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	CLIC1L	CLIC1L
Homo sapiens	RefSeq	NM_153362.1	ILMN_18255	PRSS35	NM_153362.1	NM_153362.1		167681	23503296	NM_153362.1	PRSS35	NP_699193.1	ILMN_1769580	0005090307	S	1892	CAGCTCATGCCCTCAATGTTTATATTGTGTTATCTGTTGGGTCTGGGACA	6	+	84234889-84234938	6q14.2a	Homo sapiens protease, serine, 35 (PRSS35), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	dJ223E3.1; MGC46520; C6orf158	dJ223E3.1; MGC46520; C6orf158
Homo sapiens	RefSeq	NM_002654.3	ILMN_29418	PKM2	NM_002654.3	NM_002654.3		5315	33286417	NM_002654.3	PKM2	NP_002645.3	ILMN_1672650	0006580039	I	1414	CTTGCAATTATTTGAGGAACTCCGCCGCCTGGCGCCCATTACCAGCGACC	15	-	72494879-72494928	15q23b	Homo sapiens pyruvate kinase, muscle (PKM2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2813362] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2040271] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence NAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 2040271] [evidence EXP]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 2040271] [evidence TAS]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 2854097] [evidence TAS]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 2813362] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12620389] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	OIP3; TCB; PKM; THBP1; MGC3932; PK3; CTHBP	OIP3; TCB; PKM; THBP1; MGC3932; PK3; CTHBP
Homo sapiens	RefSeq	XM_930445.1	ILMN_30732	LOC653537	XM_930445.1	XM_930445.1		653537	89040164	XM_930445.1	LOC653537	XP_935538.1	ILMN_1656421	0007610139	I	4	CCTATAGCTCTTCAGGCAAGCTGAATTGAACTCCTGTTGCTTTTTCCCTT	16	+	32672560-32672609		PREDICTED: Homo sapiens similar to hect domain and RLD 2, transcript variant 1 (LOC653537), mRNA.					
Homo sapiens	RefSeq	NM_018719.2	ILMN_14646	CDCA7L	NM_018719.2	NM_018719.2		55536	31542536	NM_018719.2	CDCA7L	NP_061189.2	ILMN_2230683	0003800753	S	1817	CACTCCAGGCCAAGTGTGCCTTAGCACGAGTGACCACAGTTTAATAGACC	7	-	21908047-21908096	7p15.3c	Homo sapiens cell division cycle associated 7-like (CDCA7L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		R1; DKFZp762L0311; RAM2; JPO2	R1; DKFZp762L0311; RAM2; JPO2
Homo sapiens	RefSeq	NM_018723.2	ILMN_5821	A2BP1	NM_018723.2	NM_018723.2		54715	22538402	NM_018723.2	A2BP1	NP_061193.2	ILMN_1787689	0006420681	I	758	CTCCAGCTTATGGTGAGTGTGGCTGGGGGTGCAGAGAGCGCACGGGAATT	16	+	6009890-6009939	16p13.3a-p13.2c	Homo sapiens ataxin 2-binding protein 1 (A2BP1), transcript variant 4, mRNA.				FOX1; HRNBP1	FOX1; HRNBP1
Homo sapiens	RefSeq	NM_152594.1	ILMN_1375	SPRED1	NM_152594.1	NM_152594.1		161742	22749220	NM_152594.1	SPRED1	NP_689807.1	ILMN_1804277	0005700707	S	3732	GTTTAACCACTTTGCTGCTAAGATTTTGCCGTCCCATTCCCATTTTTTCC	15	+	36433449-36433498	15q14d	Homo sapiens sprouty-related, EVH1 domain containing 1 (SPRED1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]	Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	NFLS; FLJ33903	NFLS; FLJ33903
Homo sapiens	RefSeq	XM_946086.1	ILMN_164093	SAPS2	XM_001129019.1	XM_001129019.1		9701	113429654	XM_001129019.1	SAPS2	XP_001129019.1	ILMN_1689126	0004120731	I	34	GGCCAGACAGGTAATAGGGCATTTCAGATTCTAATTTTCTCTTAGCAACA				22q13.33b	PREDICTED: Homo sapiens SAPS domain family, member 2 (SAPS2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	XR_039503.1	ILMN_349271	LOC100128899	XR_039503.1	XR_039503.1		100128899	169163455	XR_039503.1	LOC100128899		ILMN_3269484	0006380725	M	758	GATCTCATGGTTCTTGGACCCTTTCCACTTTCTCAGTGGCCTGTCACGCT	2	-	218333604-218333653	2q35d	PREDICTED: Homo sapiens misc_RNA (LOC100128899), miscRNA.					
Homo sapiens	RefSeq	XM_001724658.1	ILMN_350876	LOC727878	XM_001724658.1	XM_001724658.1		727878	169201868	XM_001724658.1	LOC727878	XP_001724710.1	ILMN_3294066	0003400524	M	36	GTTGCCCAAGTGACGAAGGCATTGTGGGGCACGAACCAGGCTTTGGTGAA				10p15.3a	PREDICTED: Homo sapiens hypothetical LOC727878 (LOC727878), mRNA.					
Homo sapiens	RefSeq	NM_138493.1	ILMN_24513	C6ORF129	NM_138493.2	NM_138493.2		154467	115527098	NM_138493.2	C6orf129	NP_612502.1	ILMN_1651987	0001340400	S	326	ACGCTCGTCTATGCCTACTGGACCATGTGAGCCTGGCACTTCCCCACAAC	6	-	37558919-37558939:37558940-37558968	6p21.2c	Homo sapiens chromosome 6 open reading frame 129 (C6orf129), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HSPC265; MGC131656	HSPC265
Homo sapiens	RefSeq	NM_006210.1	ILMN_27573	PEG3	NM_006210.1	NM_006210.1		5178	33354284	NM_006210.1	PEG3	NP_006201.1	ILMN_1675331	0003850468	S	6193	CTTCCTGCCTTAAGTGACAAGTAGCAACATGGCTTGGGTCCCCTGTGCAG	19	-	62015743-62015792	19q13.43a	Homo sapiens paternally expressed 3 (PEG3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp781A095; ZSCAN24; KIAA0287; PW1	DKFZp781A095; ZSCAN24; KIAA0287; PW1
Homo sapiens	Unigene	Hs.520436	ILMN_99778	HS.520436	Hs.520436		Hs.520436		13530054	BG537822			ILMN_1824102	0006770546	S	378	CTGTACCTGGTTTCCTCATCCATAAATTGGGAGTTGAACAAGGTGAGCCC	6	+	143319655-143319660:143319662-143319705		602566178F1 NIH_MGC_77 Homo sapiens cDNA clone IMAGE:4690722 5, mRNA sequence					
Homo sapiens	RefSeq	XR_038318.1	ILMN_344534	LOC729992	XR_038318.1	XR_038318.1		729992	169163373	XR_038318.1	LOC729992		ILMN_3302508	0000780408	M	858	GAGAAGAGCATGAGAGGGAGGAAGAAGCCAGACCGCAGTCAGGAGCTCAG	2	+	12081908-12081957	2p25.1a	PREDICTED: Homo sapiens misc_RNA (LOC729992), miscRNA.					
Homo sapiens	RefSeq	XR_000528.1	ILMN_33455	RNF5P1	XR_000528.1	XR_000528.1		286140	89028027	XR_000528.1	RNF5P1		ILMN_1759948	0003450377	A	455	TTCACCATCGTCTTCAATGCCCATGAGCCTTTCCGCCGGGGTACAGGTGT	8	-	38577429-38577478	8p11.23c	PREDICTED: Homo sapiens ring finger protein 5 pseudogene 1 (RNF5P1), misc RNA.					
Homo sapiens	RefSeq	NM_001013715.1	ILMN_19223	LOC441070	NM_001013715.1	NM_001013715.1		441070	61966884	NM_001013715.1	LOC441070	NP_001013737.1	ILMN_1670832	0004200114	S	1124	TTGAGGGAAGGTCCTGGTGGGTGGTGATTAGATCATAGGGGCGGTTTCCC	5	+	44876063-44876112	5p12a	Homo sapiens similar to FLJ44076 protein (LOC441070), mRNA.					
Homo sapiens	RefSeq	NM_172174.1	ILMN_16803	IL15	NM_172174.1	NM_172174.1		3600	26787983	NM_172174.1	IL15	NP_751914.1	ILMN_2369221	0001470091	A	642	GGCCATGTGGCTCTTTGGAGCAATGTTCCATCATGTTCCATGCTGCTGAC	4	+	142796806-142796855	4q31.21a-q31.21b	Homo sapiens interleukin 15 (IL15), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10851076] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10851076] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10851076] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10851076] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10851076] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10851076] [evidence TAS]	The expansion of a NK T cell population by cell division [goid 1866] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IEA]; The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus [goid 45062] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IEA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IEA]; Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism [goid 50691] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8178155] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8178155] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7759105] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10851076] [evidence TAS]	 [goid 5126] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8178155] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10851076] [evidence TAS];  [goid 5126] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16284400] [evidence IPI]	MGC9721; IL-15	MGC9721; IL-15
Homo sapiens	RefSeq	NM_172174.1	ILMN_16803	IL15	NM_172174.1	NM_172174.1		3600	26787983	NM_172174.1	IL15	NP_751914.1	ILMN_2273053	0004570050	I	573	GCCCTGAGGGCTGAGTTCTGCACCCAGTCAAGCTCAGGAAGGCCAAGAAA	4	+	142777776-142777825	4q31.21a-q31.21b	Homo sapiens interleukin 15 (IL15), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10851076] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10851076] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10851076] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10851076] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10851076] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10851076] [evidence TAS]	The expansion of a NK T cell population by cell division [goid 1866] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IEA]; The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus [goid 45062] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [evidence IEA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IEA]; Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism [goid 50691] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50778] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8178155] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8178155] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7759105] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10851076] [evidence TAS]	 [goid 5126] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8178155] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10851076] [evidence TAS];  [goid 5126] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16284400] [evidence IPI]	MGC9721; IL-15	MGC9721; IL-15
Homo sapiens	RefSeq	XM_497258.1	ILMN_16292	LOC441584	XM_497258.1	XM_497258.1		441584	51470890	XM_497258.1	LOC441584	XP_497258.1	ILMN_2221063	0007510564	S	483	CCTGCAGCAGTCAGACGACATGGAAGACAATCTGGAAGAGCTGCTGTTGC	11	-	4265357-4265406	11p15.4d	PREDICTED: Homo sapiens similar to hCG1991759 (LOC441584), mRNA.					
Homo sapiens	RefSeq	XM_001714348.1	ILMN_335558	LOC100134470	XM_001714348.1	XM_001714348.1		100134470	169170468	XM_001714348.1	LOC100134470	XP_001714400.1	ILMN_3236129	0001230743	S	482	TTTCCAGGCCCATTTTTTCCCGTCCGACTGCCTCTCAGGACCCAGAGCCT	7	+	62563874-62563919:62564001-62564004		PREDICTED: Homo sapiens similar to hCG1779533 (LOC100134470), mRNA.					
Homo sapiens	RefSeq	NM_006620.2	ILMN_15431	HBS1L	NM_006620.2	NM_006620.2		10767	24431963	NM_006620.2	HBS1L	NP_006611.1	ILMN_1659495	0005390209	S	6652	CTGGGGAGACAAAAATAACTGATCCGTTGGGTGTATACCATGTGCCAAGC	6	-	135323656-135323705	6q23.3a	Homo sapiens HBS1-like (S. cerevisiae) (HBS1L), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 9872408] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9872408] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 9872408] [evidence TAS]	ERFS; HSPC276; DKFZp686L13262; EF-1a; HBS1	HSPC276; DKFZp686L13262; ERFS; EF-1a; HBS1
Homo sapiens	RefSeq	NM_017871.3	ILMN_14346	CPSF3L	NM_017871.4	NM_017871.4		54973	112181188	NM_017871.4	CPSF3L	NP_060341.2	ILMN_1762316	0004570692	I	1907	ACAGACCCTGGGCCTGCACTTCAGGACTGTGGGTGCCCTGGGTGAACAGA	1	-	1247229-1247238:1247239-1247278	1p36.33a	Homo sapiens cleavage and polyadenylation specific factor 3-like (CPSF3L), mRNA.	A protein complex that stably associates with the C-terminus of RNA polymerase II and mediates 3'-end processing of small nuclear RNAs generated by RNA polymerase II [goid 32039] [pmid 16239144] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule [goid 16180] [pmid 16239144] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16239144] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RC68; RC-68; INTS11; FLJ13294; CPSF73L; FLJ20542; INT11	RC68; INTS11; FLJ13294; RC-68; CPSF73L; FLJ20542; INT11
Homo sapiens	RefSeq	NM_032179.1	ILMN_14346	CPSF3L	NM_017871.4	NM_017871.4		54973	112181188	NM_017871.4	CPSF3L	NP_060341.2	ILMN_1718013	0002070370	A	1784	TGGACCTACCAGGACGAGGAGCTGGGGAGCTTCCTCACATCTCTGCTGAA	1	-	1247445-1247494	1p36.33a	Homo sapiens cleavage and polyadenylation specific factor 3-like (CPSF3L), mRNA.	A protein complex that stably associates with the C-terminus of RNA polymerase II and mediates 3'-end processing of small nuclear RNAs generated by RNA polymerase II [goid 32039] [pmid 16239144] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule [goid 16180] [pmid 16239144] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16239144] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RC68; RC-68; INTS11; FLJ13294; CPSF73L; FLJ20542; INT11	RC68; INTS11; FLJ13294; RC-68; CPSF73L; FLJ20542; INT11
Homo sapiens	RefSeq	XM_941743.1	ILMN_137568	DEFB114	XM_941743.1	XM_941743.1		245928	88999154	XM_941743.1	DEFB114	XP_946836.1	ILMN_1800476	0004150064	A	71	GACTGGATGCCGGATCCACATGTACCTTGGTGAATGCTGATCGTTGCACC				6p12.3b	PREDICTED: Homo sapiens defensin, beta 114 (DEFB114), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Homo sapiens	RefSeq	NM_198264.1	ILMN_30315	FAM189B	NM_198264.1	NM_198264.1		10712	38146117	NM_198264.1	FAM189B	NP_937995.1	ILMN_2346769	0004180132	A	2324	GACCTAGGCTTCTTGTCACACTGAACACATCCAGCCACAGGCACCAGCTG	1	-	155217524-155217572:155217573-155217573	1q22a	Homo sapiens family with sequence similarity 189, member B (FAM189B), transcript variant 2, mRNA.				cote 1; COTE1	cote 1; COTE1
Homo sapiens	RefSeq	NM_194451.1	ILMN_23343	LIAS	NM_194451.1	NM_194451.1		11019	37577163	NM_194451.1	LIAS	NP_919433.1	ILMN_2393341	0003710189	A	1126	TTCCAGTTAATAACAGAGGTGGTGCCAGAATGCCTGGACTGCAGTGGATG	4	+	39155176-39155225	4p14b	Homo sapiens lipoic acid synthetase (LIAS), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid [goid 9107] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid [goid 9107] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipoate, 1,2-dithiolane-3-pentanoate, the anion derived from lipoic acid [goid 9107] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl [goid 16992] [evidence IEA]; Catalysis of the reaction: octanoic acid + 2 S = lipoic acid + 2 H [goid 17140] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl [goid 16992] [evidence IEA]; Catalysis of the reaction: octanoic acid + 2 S = lipoic acid + 2 H [goid 17140] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the reaction: protein N6-(octanoyl)lysine + 2 sulfur + 2 S-adenosyl-L-methionine = protein N6-(lipoyl)lysine + 2 L-methionine + 2 5'-deoxyadenosyl [goid 16992] [evidence IEA]; Catalysis of the reaction: octanoic acid + 2 S = lipoic acid + 2 H [goid 17140] [evidence IEA]	HUSSY-01; MGC23245; LIP1; LAS	HUSSY-01; MGC23245; LIP1; LAS
Homo sapiens	RefSeq	NM_033450.2	ILMN_170365	ABCC10	NM_033450.2	NM_033450.2		89845	25914748	NM_033450.2	ABCC10	NP_258261.2	ILMN_1776119	0000650646	S	4814	GAGGTGCTGGCTGCTTGTTTACATTCTCCTCTGGGGCTCTACCTCTCCAC	6	+	43417889-43417938	6p21.1c	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 10 (ABCC10), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	MRP7; EST182763; SIMRP7	MRP7; EST182763; SIMRP7
Homo sapiens	RefSeq	XM_945853.1	ILMN_38304	USP22	XM_945853.1	XM_945853.1		23326	89042523	XM_945853.1	USP22	XP_950946.1	ILMN_1752255	0004730020	I	99	AGTATGTAGAGGTAGAGGAAGCCGCTGGGATCCAGCGACACCTGTGGTTC				17p11.2b	PREDICTED: Homo sapiens ubiquitin specific peptidase 22, transcript variant 6 (USP22), mRNA.	A large multiprotein complex that possesses histone acetyltransferase activity and is involved in regulation of transcription. The budding yeast complex includes Gcn5p, several proteins of the Spt and Ada families, and several TBP-associate proteins (TAFs); analogous complexes in other species have analogous compositions, and usually contain homologs of the yeast proteins [goid 124] [pmid 18206973] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18206973] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 16378762] [evidence NAS]; The modification of histones by removal of ubiquitin groups [goid 16578] [pmid 18206973] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [pmid 18206973] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 18206973] [evidence IMP]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H4 [goid 10485] [pmid 18206973] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001040443.1	ILMN_177946	PHF11	NM_001040443.1	NM_001040443.1		51131	94681064	NM_001040443.1	PHF11	NP_001035533.1	ILMN_2284706	0006520110	I	323	AGCTGCAGCACAGTCATGGCCCAGGCGTCGCCGCCCCGGCCCGAGAGGGT	13	+	48968124-48968138:48968139-48968173	13q14.3a	Homo sapiens PHD finger protein 11 (PHF11), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	IGHER; IGEL; BCAP; NYREN34; NY-REN-34; RP11-185C18.3; IGER; APY	IGHER; IGEL; BCAP; NYREN34; NY-REN-34; RP11-185C18.3; IGER; APY
Homo sapiens	RefSeq	NM_016119.1	ILMN_177946	PHF11	NM_001040443.1	NM_001040443.1		51131	94681064	NM_001040443.1	PHF11	NP_001035533.1	ILMN_1776723	0006100521	S	1424	CTAGTCGTCTCCTCTTGGCCTCAGCAGCTCTTCCCTGTTCTTACTGGTTG	13	+	49000893-49000942	13q14.3a	Homo sapiens PHD finger protein 11 (PHF11), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	IGHER; IGEL; BCAP; NYREN34; NY-REN-34; RP11-185C18.3; IGER; APY	IGHER; IGEL; BCAP; NYREN34; NY-REN-34; RP11-185C18.3; IGER; APY
Homo sapiens	RefSeq	NM_001040443.1	ILMN_177946	PHF11	NM_001040443.1	NM_001040443.1		51131	94681064	NM_001040443.1	PHF11	NP_001035533.1	ILMN_2390162	0001510196	A	1484	CACTCTTTGCACACTCTTGTGTTTTTTGCTCACTGTCACATTCCCAGCAC	13	+	49000953-49001002	13q14.3a	Homo sapiens PHD finger protein 11 (PHF11), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	IGHER; IGEL; BCAP; NYREN34; NY-REN-34; RP11-185C18.3; IGER; APY	IGHER; IGEL; BCAP; NYREN34; NY-REN-34; RP11-185C18.3; IGER; APY
Homo sapiens	RefSeq	NM_006006.4	ILMN_11903	ZBTB16	NM_006006.4	NM_006006.4		7704	66932930	NM_006006.4	ZBTB16	NP_005997.2	ILMN_1750496	0007380717	I	6	AGAGAGGAGTTGAGGGCGATGAGAGCGGGTACTGCGAACTGCCGGGCGAT	11	+	113435646-113435695	11q23.2a	Homo sapiens zinc finger and BTB domain containing 16 (ZBTB16), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9294197] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9294197] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 8541544] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [pmid 12802276] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [evidence IEA]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [pmid 8541544] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9294197] [evidence NAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8541544] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]; The process by which the anatomical structures of leg are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands [goid 35110] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [pmid 8541544] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 12802276] [evidence IDA]; The self-renewing division of a germline stem cell in the male gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the male gametes [goid 48133] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9294197] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12802276] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8622986] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PLZF; ZNF145	PLZF; ZNF145
Homo sapiens	RefSeq	NM_006006.4	ILMN_11903	ZBTB16	NM_006006.4	NM_006006.4		7704	66932930	NM_006006.4	ZBTB16	NP_005997.2	ILMN_2305407	0005080450	A	2218	CACAAGCCCGAGGAGATCCCGCCCGACTGGAGGATAGAGAAGACGTACCT	11	+	113626419-113626468	11q23.2a	Homo sapiens zinc finger and BTB domain containing 16 (ZBTB16), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9294197] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9294197] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 8541544] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [pmid 12802276] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [evidence IEA]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [pmid 8541544] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9294197] [evidence NAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8541544] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]; The process by which the anatomical structures of leg are generated and organized. Morphogenesis pertains to the creation of form. A leg is a limb on which an animal walks and stands [goid 35110] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [pmid 8541544] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 12802276] [evidence IDA]; The self-renewing division of a germline stem cell in the male gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the male gametes [goid 48133] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9294197] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12802276] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8622986] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PLZF; ZNF145	PLZF; ZNF145
Homo sapiens	RefSeq	NM_001008397.1	ILMN_7364	LOC493869	NM_001008397.1	NM_001008397.1		493869	56605999	NM_001008397.1	LOC493869	NP_001008398.1	ILMN_1767665	0005720438	S	1064	TGCCAACACACTAGACCACTCTTTGGATTCAAGAGCACTGTGTATGACTG	5	+	54496203-54496252	5q11.2d	Homo sapiens similar to RIKEN cDNA 2310016C16 (LOC493869), mRNA.				UNQ847	UNQ847
Homo sapiens	RefSeq	XM_933445.1	ILMN_39187	LOC653319	XM_933445.1	XM_933445.1		653319	89040417	XM_933445.1	LOC653319	XP_938538.1	ILMN_1652248	0000730270	I	1211	GAGAAGTAACAGCATGTGTTTATCCTGATGGAAAGAGTCCAGTAGAGAGG	16	-	65773048-65773097	16q22.1a	PREDICTED: Homo sapiens similar to hypothetical protein LOC283849, transcript variant 9 (LOC653319), mRNA.					
Homo sapiens	Unigene	Hs.306876	ILMN_85632	HS.306876	Hs.306876		Hs.306876		10439674	AK026751			ILMN_1859584	0002490315	S	757	CCCTGGAAAGCTCCCCGACAACCTCCACTGCCATTACCCACTAGGCAAGT	12	-	38822105-38822154		Homo sapiens cDNA: FLJ23098 fis, clone LNG07440					
Homo sapiens	RefSeq	XM_001721669.1	ILMN_353144	LOC100131965	XM_001721669.1	XM_001721669.1		100131965	169161058	XM_001721669.1	LOC100131965	XP_001721721.1	ILMN_3249613	0004830369	S	70	GGTGGAACACAGGTCATTTGTAAAGTTGTAGGTCTGCCAAGCAGTATTGG	1	-	142242528-142242577	1q12p	PREDICTED: Homo sapiens hypothetical LOC100131965 (LOC100131965), mRNA.					
Homo sapiens	RefSeq	NM_004665.2	ILMN_16565	VNN2	NM_004665.2	NM_004665.2		8875	17865813	NM_004665.2	VNN2	NP_004656.2	ILMN_1678939	0002690239	A	1828	CTCCAGCTCCAGCCTCATTTGCTTGAGACTTTGTGTGTATGGGGGACTTG	6	-	133106828-133106877	6q23.2b	Homo sapiens vanin 2 (VNN2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9790769] [evidence TAS]; The chemical reactions and pathways involving pantothenate, the anion of pantothenic acid, the amide of beta-alanine and pantoic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods [goid 15939] [pmid 11491533] [evidence IDA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [pmid 11491533] [evidence IDA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	FOAP-4; GPI-80	FOAP-4; GPI-80
Homo sapiens	RefSeq	NM_004665.2	ILMN_16565	VNN2	NM_004665.2	NM_004665.2		8875	17865813	NM_004665.2	VNN2	NP_004656.2	ILMN_1758864	0007100161	I	5	CTTGGCCATGGTCACTTCCTCTTTTCCAATCTCTGTGGCAGTTTTTGCCC	6	-	133120672-133120715:133120716-133120721	6q23.2b	Homo sapiens vanin 2 (VNN2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9790769] [evidence TAS]; The chemical reactions and pathways involving pantothenate, the anion of pantothenic acid, the amide of beta-alanine and pantoic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods [goid 15939] [pmid 11491533] [evidence IDA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [pmid 11491533] [evidence IDA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	FOAP-4; GPI-80	FOAP-4; GPI-80
Homo sapiens	RefSeq	XM_939427.1	ILMN_139260	LOC650346	XM_939427.1	XM_939427.1		650346	88978960	XM_939427.1	LOC650346	XP_944520.1	ILMN_1741521	0007050524	S	5989	AATGAAGGAGGCTGGCACAGTGGCTCACATCTGCAGTTCCAGAGACTCAG				7q21.3d	PREDICTED: Homo sapiens hypothetical protein LOC650346 (LOC650346), mRNA.					
Homo sapiens	RefSeq	NM_004618.3	ILMN_167915	TOP3A	NM_004618.3	NM_004618.3		7156	52487034	NM_004618.3	TOP3A	NP_004609.1	ILMN_1700487	0007560014	S	3539	TCCCAGCTGAAGCCCACTGTGTGCCAAAGGAAGAAGCTCCCAGGGCTGCT	17	-	18177762-18177811	17p11.2f	Homo sapiens topoisomerase (DNA) III alpha (TOP3A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8622991] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 10728666] [evidence IDA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 8622991] [evidence TAS]	Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10728666] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TOP3	TOP3
Homo sapiens	RefSeq	NM_004618.3	ILMN_167915	TOP3A	NM_004618.3	NM_004618.3		7156	52487034	NM_004618.3	TOP3A	NP_004609.1	ILMN_2072973	0003890553	S	4018	GGTTGCAGTTAGCTGAGATTGCGCCACTGGACGACAGAGCGAGACTCAGT	17	-	18177283-18177332	17p11.2f	Homo sapiens topoisomerase (DNA) III alpha (TOP3A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8622991] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 10728666] [evidence IDA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 8622991] [evidence TAS]	Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10728666] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TOP3	TOP3
Homo sapiens	RefSeq	NM_002124.1	ILMN_20550	HLA-DRB1	NM_002124.1	NM_002124.1		3123	4504410	NM_002124.1	HLA-DRB1	NP_002115.1	ILMN_1715169	0005260484	S	834	GGACTTCAGCCAACAGGATTCCTGAGCTGAAATGCAGATGACCACATTCA	6	-	32654825-32654845:32654846-32654859:32656002-32656016	6p21.32b	Homo sapiens major histocompatibility complex, class II, DR beta 1 (HLA-DRB1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10425186] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11144299] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3456344] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8775462] [evidence NAS]; The set of specific processes that generate the ability of an organism to cause disease in another [goid 9405] [pmid 10425186] [evidence TAS]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10609818] [evidence TAS]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 10425186] [evidence TAS]; Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 11144299] [evidence TAS]; Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 3456344] [evidence TAS]	HLA-DRB1*; HLA-DR1B; HLA DRB1; DRB1	HLA-DRB1*; HLA-DR1B; HLA DRB1; DRB1
Homo sapiens	RefSeq	NM_031948.3	ILMN_14247	PRSS27	NM_031948.3	NM_031948.3		83886	49574511	NM_031948.3	PRSS27	NP_114154.1	ILMN_1775549	0007210600	S	1343	GCGCTGCTGTTGCACCTGTGAGCCCCACCAGACTCATTTGTAAATAGCGC	16	-	2762492-2762541	16p13.3d	Homo sapiens protease, serine 27 (PRSS27), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	CAPH2; MPN	CAPH2; MPN
Homo sapiens	RefSeq	XM_934107.1	ILMN_169451	LOC728936	XM_001133185.1	XM_001133185.1		728936	113411403	XM_001133185.1	LOC728936	XP_001133185.1	ILMN_1803973	0001570209	I	339	GTCCTGTAGGCAATGACCACAGCAGCATGTCCAGCCTTCCACTGAGGCAG	1	+	147008244-147008293	1q21.1e	PREDICTED: Homo sapiens similar to CG10522-PA, transcript variant 6 (LOC728936), mRNA.					
Homo sapiens	Unigene	Hs.515779	ILMN_98936	HS.515779	Hs.515779		Hs.515779		17737154	BI094776			ILMN_1859707	0005420288	S	224	GAAGAGTGGGGGGACTGCAATGGGCCTAATAGAGAATGGCTGGGGAAGGC					EST-CD34N-107 cDNA library of human CD 34+ stem/progenitor cells Homo sapiens cDNA 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001361.3	ILMN_875	DHODH	NM_001361.3	NM_001361.3		1723	68509922	NM_001361.3	DHODH	NP_001352.2	ILMN_1782993	0007380427	I	789	TCCTGACCTCACCAGCCAGGATAAGGAGGACATTGCCAGTGTGGTCAAAG	16	+	70613824-70613873	16q22.3a	Homo sapiens dihydroorotate dehydrogenase (DHODH), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate [goid 6222] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-dihydroorotate + acceptor = orotate + reduced acceptor [goid 4152] [evidence IEA]; Catalysis of the reaction: (S)-dihydroorotate + O2 = orotate + H2O2 [goid 4158] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DHOdehase	DHOdehase
Homo sapiens	Unigene	Hs.576601	ILMN_128782	HS.576601	Hs.576601		Hs.576601		83102974	DB297320			ILMN_1830720	0005890369	S	160	GGACAGGGCCGTGCCAGTTGCAAAACACTGAGAGGCAGCTACCAGGGTGT	10	-	102973726-102973775		DB297320 BRACE2 Homo sapiens cDNA clone BRACE2016602 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015957.1	ILMN_15379	APIP	NM_015957.1	NM_015957.1		51074	7705723	NM_015957.1	APIP	NP_057041.1	ILMN_2128293	0007380010	S	650	GGTCAGACGTCATGGAGTATATGTGTGGGGGGAAACATGGGAGAAGGCCA	11	-	34861466-34861515	11p13b	Homo sapiens APAF1 interacting protein (APIP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16189514] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	dJ179L10.2; APIP2; MMRP19; CGI-29	dJ179L10.2; APIP2; MMRP19; CGI-29
Homo sapiens	RefSeq	NM_015957.1	ILMN_15379	APIP	NM_015957.1	NM_015957.1		51074	7705723	NM_015957.1	APIP	NP_057041.1	ILMN_1793598	0006200202	S	400	GAGGAGCAGGTGCAGTGATTCATACCCACTCTAAAGCTGCTGTGATGGCC	11	-	34866504-34866551:34866875-34866876	11p13b	Homo sapiens APAF1 interacting protein (APIP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16189514] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	dJ179L10.2; APIP2; MMRP19; CGI-29	dJ179L10.2; APIP2; MMRP19; CGI-29
Homo sapiens	RefSeq	XM_001716934.1	ILMN_336272	LOC100132339	XM_001716934.1	XM_001716934.1		100132339	169210282	XM_001716934.1	LOC100132339	XP_001716986.1	ILMN_3200688	0006040047	A	779	GTGCCCGAGGCCCAAGTCGCAGTTCTCGTGAAAACGAAAAGGAGATCGGC				16q12.2c	PREDICTED: Homo sapiens hypothetical protein LOC100132339 (LOC100132339), mRNA.					
Homo sapiens	RefSeq	NM_052815.1	ILMN_29406	IER3	NM_003897.3	NM_003897.3		8870	119964722	NM_003897.3	IER3	NP_003888.2	ILMN_1682717	0001190367	A	972	GAGGACGTCCCGGCTGGGATGAAGTCTGGTGGTGGGTCGTAAGTTTAGGA	6	-	30819173-30819222	6p21.33b	Homo sapiens immediate early response 3 (IER3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9196025] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9703517] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9196025] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15451437] [evidence IPI]	IEX-1L; PRG1; IEX1; GLY96; DIF-2; IEX-1; DIF2	IEX-1L; PRG1; IEX1; GLY96; DIF-2; IEX-1; DIF2
Homo sapiens	RefSeq	XM_942670.1	ILMN_32055	LOC651553	XM_942670.1	XM_942670.1		651553	88952643	XM_942670.1	LOC651553	XP_947763.1	ILMN_1813633	0007610041	S	181	AGCTTGTTCCTTCCATTATCACCTTGCCAAGAATATCTAGTCAGTATTGG					PREDICTED: Homo sapiens hypothetical protein LOC651553 (LOC651553), mRNA.					
Homo sapiens	RefSeq	NM_005839.2	ILMN_177818	SRRM1	NM_005839.3	NM_005839.3		10250	115648109	NM_005839.3	SRRM1	NP_005830.2	ILMN_1697670	0006290392	S	3755	CAACTTTCAGAGCCTCTTGTATTTGGAAGGCTGGAAGGGCCCAGACTTTG	1	+	24872180-24872229	1p36.11c	Homo sapiens serine/arginine repetitive matrix 1 (SRRM1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9531537] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9531537] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9531537] [evidence TAS]	SRM160; 160-KD; POP101; MGC39488	SRM160; 160-KD; POP101; MGC39488
Homo sapiens	RefSeq	XM_001716443.1	ILMN_335923	LOC100132861	XM_001716443.1	XM_001716443.1		100132861	169166173	XM_001716443.1	LOC100132861	XP_001716495.1	ILMN_3276751	0003190114	M	33	AGGGACCAGGGTGCGGAGCAGAGGTGAGGGAGACGGGACTTACTTTGCGA	4	-	38342470-38342519	4p14c	PREDICTED: Homo sapiens hypothetical protein LOC100132861 (LOC100132861), mRNA.					
Homo sapiens	RefSeq	XM_933658.1	ILMN_33400	LOC646496	XM_933658.1	XM_933658.1		646496	89036674	XM_933658.1	LOC646496	XP_938751.1	ILMN_1681332	0001410327	S	133	GGCGAGGGTCCTGCGCGCCCCCAGCCGCAGTCCCGGGAGCCTGCCCAGCT	13	+	25523829-25523878	13q12.13b	PREDICTED: Homo sapiens hypothetical LOC646496 (LOC646496), mRNA.					
Homo sapiens	RefSeq	NM_014979.1	ILMN_14355	SV2C	NM_014979.1	NM_014979.1		22987	73695464	NM_014979.1	SV2C	NP_055794.1	ILMN_1724352	0006270470	S	2229	ATCCCCATCCTGCTGGCTTCTACTGTGCTCGTGTGTGGAGGACTCGTTGG	5	+	75581606-75581655	5q13.3c-q13.3d	Homo sapiens synaptic vesicle glycoprotein 2C (SV2C), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC118874; MGC118877; MGC118876; MGC118875	MGC118874; MGC118877; MGC118876; MGC118875
Homo sapiens	RefSeq	NM_006360.3	ILMN_19862	EIF3M	NM_006360.3	NM_006360.3		10480	52851442	NM_006360.3	EIF3M	NP_006351.2	ILMN_2192693	0001980564	S	426	TTAAAGTGGCAGCATCTTGTGGGGCCATCCAGTACATCCCAACTGAGCTG	11	+	32567202-32567251	11p13e	Homo sapiens eukaryotic translation initiation factor 3, subunit M (EIF3M), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ29030; GA17; hfl-B5; eIF3m; PCID1; B5	FLJ29030; GA17; eIF3m; PCID1; B5; hfl-B5
Homo sapiens	RefSeq	NM_006360.3	ILMN_19862	EIF3M	NM_006360.3	NM_006360.3		10480	52851442	NM_006360.3	EIF3M	NP_006351.2	ILMN_2192694	0000940398	S	1022	CAGACCCAGAGAAAAGTAGTTGTCAGTCATAGCACACATCGGACATTTGG	11	+	32579919-32579944:32580401-32580424	11p13e	Homo sapiens eukaryotic translation initiation factor 3, subunit M (EIF3M), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ29030; GA17; hfl-B5; eIF3m; PCID1; B5	FLJ29030; GA17; eIF3m; PCID1; B5; hfl-B5
Homo sapiens	RefSeq	NM_207195.1	ILMN_5544	ADAM15	NM_207195.1	NM_207195.1		8751	46909595	NM_207195.1	ADAM15	NP_997078.1	ILMN_1756920	0003440452	A	2823	CGGGATTGAGGAAGGTCCGCACAGCCTGTCTCTGCTCAGTTGCAATAAAC	1	+	153301807-153301856	1q21.3e-q22a	Homo sapiens ADAM metallopeptidase domain 15 (ADAM15), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10531379] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10531379] [evidence NAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 9516430] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10531379] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 10531379] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MDC15	MDC15
Homo sapiens	RefSeq	XM_937888.1	ILMN_5544	ADAM15	NM_207195.1	NM_207195.1		8751	46909595	NM_207195.1	ADAM15	NP_997078.1	ILMN_1751500	0006480131	A	2259	CGCCTGCACCAGCGACTCTGCCAGCTCAAGGGACCCACCTGCCAGTACAG	1	+	153299394-153299443	1q21.3e-q22a	Homo sapiens ADAM metallopeptidase domain 15 (ADAM15), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10531379] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10531379] [evidence NAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 9516430] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10531379] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 10531379] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MDC15	
Homo sapiens	RefSeq	XR_037397.1	ILMN_347723	LOC100129267	XR_037397.1	XR_037397.1		100129267	169196048	XR_037397.1	LOC100129267		ILMN_3191227	0005270551	A	600	GAATCTGCAAATACTGCAGAAACCACTTCACCTCATCCCAGCCATGATGG				10q21.3a	PREDICTED: Homo sapiens misc_RNA (LOC100129267), miscRNA.					
Homo sapiens	RefSeq	XR_017616.1	ILMN_182244	LOC341315	XR_017616.1	XR_017616.1		341315	113423388	XR_017616.1	LOC341315		ILMN_3201221	0000870609	A	1622	TAATGAAACTGTAGCTGTACTACAAGCCCACCAAGCTGAAGTGGCTGCCC	12	+	62503857-62503906	12q14.2b	PREDICTED: Homo sapiens misc_RNA (LOC341315), miscRNA.					
Homo sapiens	RefSeq	NM_139013.1	ILMN_16801	MAPK14	NM_139012.1	NM_139012.1		1432	20986511	NM_139012.1	MAPK14	NP_620581.1	ILMN_1788002	0000110639	A	447	CCAGTGGGCTCTGGCGCCTATGGCTCTGTGTGTGCTGCTTTTGACACAAA	6	+	36103997-36104028:36128454-36128471	6p21.31b	Homo sapiens mitogen-activated protein kinase 14 (MAPK14), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8846784] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9687510] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10912793] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10706854] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 7997261] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10706854] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10838079] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8846784] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9687510] [evidence EXP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 10706854] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9792677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17255097] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16751104] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12761180] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16636664] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 8339] [pmid 7997261] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p38; PRKM15; PRKM14; RK; SAPK2A; CSBP1; CSPB1; p38ALPHA; Mxi2; EXIP; CSBP2	p38; PRKM15; PRKM14; RK; SAPK2A; CSBP1; CSPB1; p38ALPHA; Mxi2; EXIP; CSBP2
Homo sapiens	RefSeq	XM_001716106.1	ILMN_348055	LOC652346	XM_001716106.1	XM_001716106.1		652346	169217945	XM_001716106.1	LOC652346	XP_001716158.1	ILMN_3246055	0000780730	S	38	CTAGATCAGAGCTGCATTTGGGGGCTGATGTGTGGCTACTGCCAGCAGAC					PREDICTED: Homo sapiens similar to PML protein (LOC652346), mRNA.					
Homo sapiens	RefSeq	NM_001001436.1	ILMN_16973	C16ORF87	NM_001001436.2	NM_001001436.2		388272	141802576	NM_001001436.2	C16orf87	NP_001001436.1	ILMN_1690911	0001010575	S	619	CCACACTTCGGGAGCAAAGCTGTGTAGGCTTGGACTGTTCTGGGATTTCC	16	-	46836673-46836722	16q11.2i	Homo sapiens chromosome 16 open reading frame 87 (C16orf87), mRNA.				MGC62018	MGC62018
Homo sapiens	RefSeq	XM_001719188.1	ILMN_352404	LOC100132805	XM_001719188.1	XM_001719188.1		100132805	169166138	XM_001719188.1	LOC100132805	XP_001719240.1	ILMN_3295874	0004260598	M	3421	GGAGAGTTCCTCGACTCCTGTATGTGGGGTTGCAGTTGCTCACTGGGTGC				3q29d	PREDICTED: Homo sapiens similar to predicted protein (LOC100132805), mRNA.					
Homo sapiens	RefSeq	XM_001719188.1	ILMN_352404	LOC100132805	XM_001719188.1	XM_001719188.1		100132805	169166138	XM_001719188.1	LOC100132805	XP_001719240.1	ILMN_3219344	0006760563	A	3119	CCCAGTCACACTCTGATGGAGCTTTCTGCCTTCTGGTTAAGTTAGCTGAG				3q29d	PREDICTED: Homo sapiens similar to predicted protein (LOC100132805), mRNA.					
Homo sapiens	RefSeq	NM_007131.2	ILMN_168501	ZNF75D	NM_007131.2	NM_007131.2		7626	41152069	NM_007131.2	ZNF75D	NP_009062.2	ILMN_2101025	0002650653	S	5226	GAGAAAAGTAAGGCATATGGCTCACAGTGATGATGCCAGTCAGAGCCAGG	X	-	134419981-134420030	Xq26.3a	Homo sapiens zinc finger protein 75D (ZNF75D), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8288223] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126327; ZNF75D; D8C6; ZNF82	MGC126327; ZNF75D; D8C6; ZNF82
Homo sapiens	RefSeq	XR_018020.2	ILMN_175345	LOC641787	XR_018020.2	XR_018020.2		641787	169170523	XR_018020.2	LOC641787		ILMN_3238297	0006270129	S	268	ATGTTGGCCAGGCTTGTCTTGAACTCCTTTCCTCACATGATCCGCCCCAC	7	-	76079272-76079321		PREDICTED: Homo sapiens misc_RNA (LOC641787), miscRNA.					
Homo sapiens	RefSeq	XM_931824.1	ILMN_175752	SMA5	NM_021036.1	NM_021036.1		11042	58372167	NM_021036.1	SMA5	NP_066366.1	ILMN_1662483	0007320433	S	217	CAGTCATGATGGCCTGCACTCCACACAATGCAACAGAGTGAAAGAGCAGG	5	-	69886902-69886951	5q13.2a	Homo sapiens SMA5 (SMA5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]		
Homo sapiens	RefSeq	NM_021036.1	ILMN_175752	SMA5	NM_021036.1	NM_021036.1		11042	58372167	NM_021036.1	SMA5	NP_066366.1	ILMN_1770444	0003310315	S	1445	GCCAGAAGACTTCCAGGGAAACTCATTTCAAGATGAAAATGGACCAGCCG	5	-	69812890-69812939	5q13.2a	Homo sapiens SMA5 (SMA5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]		
Homo sapiens	RefSeq	NM_001005499.1	ILMN_28216	OR6C70	NM_001005499.1	NM_001005499.1		390327	53933271	NM_001005499.1	OR6C70	NP_001005499.1	ILMN_2208895	0005960554	S	333	CCTTCTAGCTGCTCTGTCCTATGATCGCTATGTTGCCATCTGCAAACCTT	12	-	55863540-55863589	12q13.2b	Homo sapiens olfactory receptor, family 6, subfamily C, member 70 (OR6C70), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_015950.3	ILMN_163428	MRPL2	NM_015950.3	NM_015950.3		51069	41872659	NM_015950.3	MRPL2	NP_057034.2	ILMN_1763264	0006420296	S	876	TCATAACAAACGGGTCATTGGCAAGGCAGGTCGCAACCGCTGGCTGGGCA	6	-	43130105-43130154	6p21.1d	Homo sapiens mitochondrial ribosomal protein L2 (MRPL2), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	CGI-22; RPML14; MRP-L14	CGI-22; RPML14; MRP-L14
Homo sapiens	RefSeq	NM_021930.3	ILMN_23747	RINT1	NM_021930.4	NM_021930.4		60561	142370362	NM_021930.4	RINT1	NP_068749.3	ILMN_1784584	0002690520	S	2485	CAGTCAGCTTCAGGGCAGCTTCCTGCCACAGCAGCATTAAATGAAGTTGG	7	+	104994869-104994918	7q22.2b	Homo sapiens RAD50 interactor 1 (RINT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15029241] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; A cell cycle checkpoint that blocks cell cycle progression from G2 to M phase in response to DNA damage [goid 31572] [pmid 11096100] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15272311] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096100] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15029241] [evidence IPI]	DKFZp667H2324; RINT-1	DKFZp667H2324; RINT-1
Homo sapiens	RefSeq	XM_001718696.1	ILMN_350487	LOC100133333	XM_001718696.1	XM_001718696.1		100133333	169208134	XM_001718696.1	LOC100133333	XP_001718748.1	ILMN_3247769	0006940750	S	175	TTCCCGCAGCGATCCCGCGCAGGGCTGAAGCAGTGCCTACTCAATAAAAC	15	-	28501140-28501168:28551070-28551090	15q13.2a-q13.2b	PREDICTED: Homo sapiens hypothetical protein LOC100133333 (LOC100133333), mRNA.					
Homo sapiens	RefSeq	NM_207495.2	ILMN_11265	DKFZP686I15217	NM_207495.2	NM_207495.2		401232	46559764	NM_207495.2	DKFZp686I15217	NP_997378.2	ILMN_2138622	0001500056	S	2144	ATCCGCAGTTCCCAGGAATTCGCCCGGTTAATAGCACCCAGAGCCCCTGC	6	+	2936075-2936124	6p25.2b	Homo sapiens hypothetical protein DKFZp686I15217 (DKFZp686I15217), mRNA.					
Homo sapiens	RefSeq	NM_207495.2	ILMN_11265	DKFZP686I15217	NM_207495.2	NM_207495.2		401232	46559764	NM_207495.2	DKFZp686I15217	NP_997378.2	ILMN_1668825	0007380333	S	1820	CCGGGGGATCAGAGTTTGTTTTTGCGGAGAAGTGAGTCCTTTATGCCCCA	6	+	2935751-2935800	6p25.2b	Homo sapiens hypothetical protein DKFZp686I15217 (DKFZp686I15217), mRNA.					
Homo sapiens	RefSeq	NM_001004360.1	ILMN_29989	DPP10	NM_001004360.2	NM_001004360.2		57628	85787626	NM_001004360.2	DPP10	NP_001004360.2	ILMN_1778425	0002120619	A	4108	GGTATTCAACTTTTTCCCTGGATGCTTTGGAATCGTGTCTTCCATGCTCC	2	+	116317551-116317600	2q14.1a-q14.1c	Homo sapiens dipeptidyl-peptidase 10 (DPP10), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 12662155] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [pmid 12662155] [evidence IDA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	DPL2; DPRP3; DPPY	DPRP3
Homo sapiens	RefSeq	NM_052959.2	ILMN_179640	PANX3	NM_052959.2	NM_052959.2		116337	39995066	NM_052959.2	PANX3	NP_443191.1	ILMN_1811316	0000020112	S	1116	GGCTGGCTTAGAACCCTCAAAACCCAAACACCTCACCAACTCGGCATGTG	11	+	123994978-123995027	11q24.2a	Homo sapiens pannexin 3 (PANX3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]				
Homo sapiens	RefSeq	NM_152605.2	ILMN_175290	ZNF781	NM_152605.2	NM_152605.2		163115	46094067	NM_152605.2	ZNF781	NP_689818.2	ILMN_2141455	0007100500	S	2287	TCAGGAATGTAGGAAGGCCTTTAGGCAGAGGGCGCATCTTACTCAACATC	19	-	42851231-42851280	19q13.12c	Homo sapiens zinc finger protein 781 (ZNF781), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC131783; FLJ37549	MGC131783; FLJ37549
Homo sapiens	RefSeq	NM_178176.2	ILMN_29070	MOGAT3	NM_178176.2	NM_178176.2		346606	31342324	NM_178176.2	MOGAT3	NP_835470.1	ILMN_1694634	0004180224	S	1074	CCCACCGAGGAGGAAGTCAATCACTATCACGCCCTCTACATGACGGCCCT	7	-	100839296-100839345	7q22.1d	Homo sapiens monoacylglycerol O-acyltransferase 3 (MOGAT3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1,2-diacylglycerol = CoA + triacylglycerol [goid 4144] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DGAT2L7; MGC119204; MGC119203; DC7; MGAT3	DGAT2L7; MGC119204; DC7; MGC119203; MGAT3
Homo sapiens	RefSeq	NM_006933.2	ILMN_183546	SLC5A3	NM_006933.4	NM_006933.4		6526	148536860	NM_006933.4	SLC5A3	NP_008864.3	ILMN_1787813	0001660551	S	2337	TGCAGAGAGGAGGGCAACCCAGTGGCATCCTTAGGTCATTCAGAGGCAGA	21	+	34391192-34391241	21q22.11c	Homo sapiens solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 (SLC5A3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1372904] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; The directed movement of myo-inositol into, out of, within or between cells. Myo-inositol is 1,2,3,4,5/4,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 15798] [evidence IEA]; Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment [goid 43576] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: myo-inositol(out) + Na+(out) = myo-inositol(in) + Na+(in) [goid 5367] [pmid 1372904] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SMIT2; SMIT	SMIT2; SMIT
Homo sapiens	RefSeq	NM_002968.1	ILMN_4737	SALL1	NM_002968.2	NM_002968.2		6299	118442836	NM_002968.2	SALL1	NP_002959.2	ILMN_1657888	0004610451	S	4033	TCATTCCTGTTCAGAATGCGACCTATGGTGGCCTCCTACTCCTTGCCCCC	16	-	51170946-51170995	16q12.1c	Homo sapiens sal-like 1 (Drosophila) (SALL1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9425907] [evidence TAS]; Signaling at short range between cells of different ancestry and developmental potential that results in one cell or group of cells effecting a developmental change in the other. This is often done by secretion of proteins by one cell which affects the neighboring cells and causes them to adopt a certain fate [goid 31129] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; Signaling at short range between cells of different ancestry and developmental potential that results in one cell or group of cells effecting a developmental change in the other. This is often done by secretion of proteins by one cell which affects the neighboring cells and causes them to adopt a certain fate [goid 31129] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9425907] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TBS; HSAL1; ZNF794	TBS; HSAL1
Homo sapiens	RefSeq	Hs.444309	ILMN_170683	LOC732138	XM_001131968.1	XM_001131968.1		732138	113415039	XM_001131968.1	LOC732138	XP_001131968.1	ILMN_1859744	0002060470	S	93	AGGTGGGGTAATAGGCTGCGCAATCCACTTGCTCTGGGGGAGCTTAGGGT					PREDICTED: Homo sapiens hypothetical protein LOC732138 (LOC732138), mRNA.					
Homo sapiens	RefSeq	NM_001004329.1	ILMN_9066	DBX2	NM_001004329.1	NM_001004329.1		440097	51972229	NM_001004329.1	DBX2	NP_001004329.1	ILMN_1724511	0005290706	S	2332	CTGGTAACGATTTGCCGAGTTAATCCAGAAGTTTTTACTCCAGGACCAAG	12	-	43695146-43695195	12q12h	Homo sapiens developing brain homeobox 2 (DBX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ16139	FLJ16139
Homo sapiens	RefSeq	NR_030325.1	ILMN_388048	MIR595	NR_030325.1	NR_030325.1		693180	262205966	NR_030325.1	MIR595		ILMN_3309879	0002140491	S	21	ACACCAGCACGCTCAATGTAGTCTTGTAAGGAACAGGTTGAAGTGTGCCG				7q36.3e	Homo sapiens microRNA 595 (MIR595), microRNA.					
Homo sapiens	RefSeq	NM_018140.2	ILMN_170187	CEP72	NM_018140.3	NM_018140.3		55722	109148536	NM_018140.3	CEP72	NP_060610.2	ILMN_1800611	0001030368	S	2015	GACTCCTGCCGAGAAGCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTAC	5	+	653267-653268:653269-653316	5p15.33e	Homo sapiens centrosomal protein 72kDa (CEP72), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]		Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	MGC5307; KIAA1519; FLJ10565	KIAA1519; FLJ10565
Homo sapiens	RefSeq	NM_021052.2	ILMN_1822	HIST1H2AE	NM_021052.2	NM_021052.2		3012	19557649	NM_021052.2	HIST1H2AE	NP_066390.1	ILMN_1756849	0003870678	S	198	CTCCAGTGTACCTGGCAGCGGTGCTGGAATATCTGACGGCCGAGATCTTA	6	+	26217345-26217394	6p22.1d	Homo sapiens histone cluster 1, H2ae (HIST1H2AE), mRNA.				H2A/a; H2A.1; H2AFA; H2A.2	H2A/a; H2A.1; H2AFA; H2A.2
Homo sapiens	RefSeq	NM_033487.1	ILMN_24213	CDC2L1	NM_033487.1	NM_033487.1		984	16332359	NM_033487.1	CDC2L1	NP_277022.1	ILMN_2359935	0003610133	A	475	GCTAGAGTGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAACGACATCG	1	-	1637720-1637769	1p36.33a	Homo sapiens cell division cycle 2-like 1 (PITSLRE proteins) (CDC2L1), transcript variant 3, mRNA. XM_001716037 XM_001716055	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8195233] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8195233] [evidence TAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10882096] [evidence IEP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9750192] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12501247] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9750192] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 1639388] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8195233] [evidence TAS]; Any process that modulates the frequency, rate or extent of mRNA processing, those processes involved in the conversion of a primary mRNA transcript into a mature mRNA prior to its translation into polypeptide [goid 50684] [pmid 12501247] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12624090] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12501247] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p58CDC2L1; CDK11-p46; CLK-1; CDK11-p110; PK58; CDK11-p58; p58CLK-1; p58	p58CDC2L1; CDK11-p46; CLK-1; CDK11-p110; PK58; CDK11-p58; p58CLK-1; p58
Homo sapiens	RefSeq	NM_002463.1	ILMN_20722	MX2	NM_002463.1	NM_002463.1		4600	11342663	NM_002463.1	MX2	NP_002454.1	ILMN_2231928	0005490470	S	2733	GGCCTTGGACATTTAGTGACTGTTAGCCGGTCCCTTTCAGATCCAGTGGC	21	+	41702511-41702560	21q22.3a	Homo sapiens myxovirus (influenza virus) resistance 2 (mouse) (MX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8798556] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8798556] [evidence TAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 8798556] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8798556] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MXB	MXB
Homo sapiens	RefSeq	XM_932059.1	ILMN_34723	LOC644228	XM_932059.1	XM_932059.1		644228	89029456	XM_932059.1	LOC644228	XP_937152.1	ILMN_1689153	0004780301	S	253	CCGCAGCACCAGGTTAAAGCTTTCTTCCTTGGCAGTACTTGTCACCTCAG	9	+	67504884-67504933		PREDICTED: Homo sapiens hypothetical protein LOC644228 (LOC644228), mRNA.					
Homo sapiens	RefSeq	NM_138355.2	ILMN_2736	SCRN2	NM_138355.2	NM_138355.2		90507	52851427	NM_138355.2	SCRN2	NP_612364.1	ILMN_1662016	0007150647	S	1142	TGATGGAGAGAGATCAGGATCGGGGGCAGCAGCTCCAGCAGAAACAGCAG	17	-	43270334-43270367:43270635-43270650	17q21.32b	Homo sapiens secernin 2 (SCRN2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]	Ses2	Ses2
Homo sapiens	RefSeq	XM_001713862.1	ILMN_336068	LOC100132560	XM_001713862.1	XM_001713862.1		100132560	169162925	XM_001713862.1	LOC100132560	XP_001713914.1	ILMN_3236507	0004610279	S	403	CTCTACTTCCCGGCGGGGTCCTGCGGAGTTGGCGGAGGCTCCTCCAGGGA	1	-	204304407-204304456	1q32.1g	PREDICTED: Homo sapiens hypothetical protein LOC100132560 (LOC100132560), mRNA.					
Homo sapiens	RefSeq	NM_201599.1	ILMN_26373	ZMYM3	NM_201599.1	NM_201599.1		9203	42475940	NM_201599.1	ZMYM3	NP_963893.1	ILMN_1662801	0003460379	I	15	GCCGTCGCTGTCTGCAGTTCTAGGCTTGTAGCCTTTGCACTAACCCTGCC	X	-	70473882-70473931	Xq13.1c	Homo sapiens zinc finger, MYM-type 3 (ZMYM3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10486218] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10486218] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF261; DXS6673E; XFIM; MYM; KIAA0385; ZNF198L2	ZNF261; DXS6673E; XFIM; MYM; KIAA0385; ZNF198L2
Homo sapiens	RefSeq	NM_005096.2	ILMN_26373	ZMYM3	NM_201599.1	NM_201599.1		9203	42475940	NM_201599.1	ZMYM3	NP_963893.1	ILMN_1656316	0002340709	A	5134	ATGCAGGATGGGATCTGTGGTCAAAGGACAGGCGAGGAGCTGTGGGCGCA	X	-	70459782-70459831	Xq13.1c	Homo sapiens zinc finger, MYM-type 3 (ZMYM3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10486218] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10486218] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF261; DXS6673E; XFIM; MYM; KIAA0385; ZNF198L2	ZNF261; DXS6673E; XFIM; MYM; KIAA0385; ZNF198L2
Homo sapiens	RefSeq	NM_014502.3	ILMN_10626	PRPF19	NM_014502.3	NM_014502.3		27339	34222313	NM_014502.3	PRPF19	NP_055317.1	ILMN_1769545	0007050189	S	1917	GGGAACGGATGTGGAAGGAAGAACTGTCACCCTCTTAAGGCCCAGGGTCG	11	-	60414964-60415013	11q12.2a	Homo sapiens PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) (PRPF19), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11435423] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11435423] [evidence IDA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 11435423] [evidence IDA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of astrocyte differentiation [goid 48711] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11435423] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	NMP200; PRP19; hPSO4; UBOX4; SNEV; PSO4	hPSO4; UBOX4; PSO4; NMP200; PRP19; SNEV
Homo sapiens	RefSeq	NM_001011551.1	ILMN_21750	C1GALT1C1	NM_152692.3	NM_152692.3		29071	58532585	NM_152692.3	C1GALT1C1	NP_689905.1	ILMN_1751234	0006020377	A	1200	CAGATGCATGTGATGATGTATGGGGTATACCGCCTTAGGGCATTTGGGCA	X	-	119760119-119760168	Xq24d	Homo sapiens C1GALT1-specific chaperone 1 (C1GALT1C1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC19947; C1GALT2; HSPC067; C1Gal-T2; COSMC; c38h2-l1	C1Gal-T2; COSMC; c38h2-l1; MGC19947; C1GALT2; HSPC067
Homo sapiens	RefSeq	NM_152692.3	ILMN_21750	C1GALT1C1	NM_152692.3	NM_152692.3		29071	58532585	NM_152692.3	C1GALT1C1	NP_689905.1	ILMN_1753903	0001240538	I	266	GAGAGCCTTTTGTACTATATGCAACTAACTTGATTTCAAGCTTGGGAACC	X	-	119761137-119761186	Xq24d	Homo sapiens C1GALT1-specific chaperone 1 (C1GALT1C1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC19947; C1GALT2; HSPC067; C1Gal-T2; COSMC; c38h2-l1	C1Gal-T2; COSMC; c38h2-l1; MGC19947; C1GALT2; HSPC067
Homo sapiens	RefSeq	NM_032414.2	ILMN_10836	PROK1	NM_032414.2	NM_032414.2		84432	56676332	NM_032414.2	PROK1	NP_115790.1	ILMN_1716259	0001440609	S	1198	TCCAAGGATCAGCCCTGAGAGCAGGTTGGTGACTTTGAGGAGGGCAGTCC	1	+	110801325-110801374	1p13.3a	Homo sapiens prokineticin 1 (PROK1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	PK1; PRK1; EGVEGF	PK1; PRK1; EGVEGF
Homo sapiens	RefSeq	NM_173170.1	ILMN_9939	IL1F5	NM_173170.1	NM_173170.1		26525	27894309	NM_173170.1	IL1F5	NP_775262.1	ILMN_1804901	0001240528	A	2267	ATGATCCCTGTCTCCTCGTGTTTACATTCTGTGTGTGTCCCCTCCCACAA	2	+	113538391-113538440	2q13d	Homo sapiens interleukin 1 family, member 5 (delta) (IL1F5), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [pmid 10512743] [evidence TAS]	MGC29840; IL1HY1; FIL1D; IL1RP3; FIL1(DELTA); IL1L1; FIL1	MGC29840; IL1HY1; FIL1D; IL1RP3; FIL1(DELTA); IL1L1; FIL1
Homo sapiens	RefSeq	XM_001725481.1	ILMN_340682	LOC100131554	XM_001725481.1	XM_001725481.1		100131554	169163928	XM_001725481.1	LOC100131554	XP_001725533.1	ILMN_3282578	0006960180	M	619	TGTCATGGACCTCTGGGGCTGGATTCCGCTTGGCTGGTCAGCTCTTGACA				2p16.3d	PREDICTED: Homo sapiens hypothetical protein LOC100131554 (LOC100131554), mRNA.					
Homo sapiens	RefSeq	NM_019857.3	ILMN_14019	CTPS2	NM_019857.3	NM_019857.3		56474	28559082	NM_019857.3	CTPS2	NP_062831.3	ILMN_1690693	0000160008	I	165	GTTCCCCGGGAAGCGTGGAGTTCACCCGCGCACTCGAAGTGCCTTTGCAA	X	-	16730845-16730894	Xp22.2	Homo sapiens CTP synthase II (CTPS2), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]	Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [pmid 10899599] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [evidence IEA]	MGC32997; DKFZp686C17207; FLJ43358	MGC32997; DKFZp686C17207; FLJ43358
Homo sapiens	RefSeq	NM_013390.1	ILMN_11103	TMEM2	NM_013390.1	NM_013390.1		23670	7019554	NM_013390.1	TMEM2	NP_037522.1	ILMN_1784661	0003360112	S	5704	GGCTGATGGCCTCTACCTTTGTATCCAGGAGAAACTGCAGAGCAGCCCTG	9	-	73488479-73488528	9q21.13a	Homo sapiens transmembrane protein 2 (TMEM2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10767548] [evidence TAS]				
Homo sapiens	RefSeq	XM_001716872.1	ILMN_341398	LOC100128435	XM_001716872.1	XM_001716872.1		100128435	169208748	XM_001716872.1	LOC100128435	XP_001716924.1	ILMN_3260469	0004210168	M	539	CCAGGCAGAGGCAGAAATCATGGTCAGATCCCGAGGAAGAGCAAGACGAG				15q13.2a	PREDICTED: Homo sapiens similar to hCG2045005 (LOC100128435), mRNA.					
Homo sapiens	RefSeq	XM_001716872.1	ILMN_341398	LOC100128435	XM_001716872.1	XM_001716872.1		100128435	169208748	XM_001716872.1	LOC100128435	XP_001716924.1	ILMN_3184010	0004150653	A	461	CACTGACTACACGATGATGGGAGGATGGACGCCGCCTTCAGGAGCTGGAG				15q13.2a	PREDICTED: Homo sapiens similar to hCG2045005 (LOC100128435), mRNA.					
Homo sapiens	RefSeq	NR_024284.1	ILMN_372177	LOC220930	NR_024284.1	NR_024284.1		220930	210147476	NR_024284.1	LOC220930		ILMN_3249620	0005220136	S	1392	GTTTTTCAGTCGCCTACCGAATCAGGTCATAGACTATGGAATTGACCCCA	10	-	31606228-31606277		Homo sapiens hypothetical LOC220930 (LOC220930), non-coding RNA.					
Homo sapiens	RefSeq	NM_015344.1	ILMN_4515	LEPROTL1	NM_015344.1	NM_015344.1		23484	7662509	NM_015344.1	LEPROTL1	NP_056159.1	ILMN_1752591	0006370164	S	2436	GCACTGCTACTGTTTTATCCACTTGGCCACAGACTTTTTCTAACAGCTGC	8	+	30084876-30084925	8p12e	Homo sapiens leptin receptor overlapping transcript-like 1 (LEPROTL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HSPC112; Vps55; my047	HSPC112; Vps55; my047
Homo sapiens	RefSeq	NM_194448.1	ILMN_8463	CLEC4A	NM_194448.1	NM_194448.1		50856	37577116	NM_194448.1	CLEC4A	NP_919430.1	ILMN_2399363	0004050202	A	931	GAGCATTTTTTCATGTGCCAGAGCCTGTACTGGAGGCCCCCATTGTGCAC	12	+	8182336-8182385	12p13.31b	Homo sapiens C-type lectin domain family 4, member A (CLEC4A), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10438934] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10438934] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10438934] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 10438934] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	DCIR; DDB27; LLIR; HDCGC13P; CLECSF6	DCIR; LLIR; HDCGC13P; DDB27; CLECSF6
Homo sapiens	RefSeq	NM_021915.2	ILMN_23104	ZNF69	NM_021915.2	NM_021915.2		7620	162417965	NM_021915.2	ZNF69	NP_068734.1	ILMN_3251506	0005890372	S	1447	ACTTGTGGTGAGGGGAGGTCATCTGTAGACTCCTGGACCTGTTTTTGCCT	19	+	12025153-12025202	19p13.2a	Homo sapiens zinc finger protein 69 (ZNF69), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC59928; Cos5	MGC59928; Cos5
Homo sapiens	RefSeq	NM_019085.1	ILMN_307734	FBXL19	NM_001099784.1	NM_001099784.1		54620	153791734	NM_001099784.1	FBXL19	NP_001093254.1	ILMN_1671215	0000990224	S	3642	TGGGGATAGCGAGAGGCTTGAGAATGGGGCCGCTTGGGGGAGGGAAGAGG				16p11.2c	Homo sapiens F-box and leucine-rich repeat protein 19 (FBXL19), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434K0410; MGC50505; JHDM1C; Fbl19	DKFZp434K0410; MGC50505; Fbl19
Homo sapiens	RefSeq	NM_021177.3	ILMN_22587	LSM2	NM_021177.3	NM_021177.3		57819	34013512	NM_021177.3	LSM2	NP_067000.1	ILMN_2070300	0004540349	S	786	CCAGGGCAGCATGTGATTCATTTGGGGATGGAAGGAATCTGTCCCGCATC	6	-	31873174-31873223	6p21.33a	Homo sapiens LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) (LSM2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence NAS]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with the U6 small nuclear RNA (U6 snRNA) [goid 17070] [pmid 10523320] [evidence NAS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IEA]	G7b; snRNP; C6orf28; YBL026W	G7b; snRNP; C6orf28; YBL026W
Homo sapiens	RefSeq	NM_138383.1	ILMN_29748	LOC92154	NM_138383.1	NM_138383.1		92154	46195762	NM_138383.1	LOC92154	NP_612392.1	ILMN_1780299	0005550100	S	2195	GGCTCCGCAGGACCGTCACCAACGACAGGTCGGCGCCCCGCATCTTATGA				16q22.1f	Homo sapiens hypothetical protein BC002770 (LOC92154), mRNA.					
Homo sapiens	RefSeq	NM_006628.4	ILMN_2093	ARPP19	NM_006628.4	NM_006628.4		10776	56549669	NM_006628.4	ARPP19	NP_006619.1	ILMN_2059505	0006620356	S	4957	CACTAGCACTTGTGATGCAATAGAACACTTCGCCTGTACTGAAAGGGCCA	15	-	52839587-52839636	15q21.2c	Homo sapiens cAMP-regulated phosphoprotein, 19kDa (ARPP19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of gluconeogenesis [goid 45722] [pmid 9653196] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46326] [pmid 9653196] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9653196] [evidence IDA];  [goid 15459] [pmid 9653196] [evidence IDA]	ARPP19; ARPP16; FLJ41622; ARPP-16	ARPP19; ARPP16; FLJ41622; ARPP-16
Homo sapiens	RefSeq	NM_006628.4	ILMN_2093	ARPP19	NM_006628.4	NM_006628.4		10776	56549669	NM_006628.4	ARPP19	NP_006619.1	ILMN_1772798	0002140368	S	4659	CTCAGCACACACTGCCAGTCTTCCCCAATATCTGTCTCCTCTCAATTCCC	15	-	52839885-52839934	15q21.2c	Homo sapiens cAMP-regulated phosphoprotein, 19kDa (ARPP19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of gluconeogenesis [goid 45722] [pmid 9653196] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46326] [pmid 9653196] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9653196] [evidence IDA];  [goid 15459] [pmid 9653196] [evidence IDA]	ARPP19; ARPP16; FLJ41622; ARPP-16	ARPP19; ARPP16; FLJ41622; ARPP-16
Homo sapiens	RefSeq	NM_000443.2	ILMN_24715	ABCB4	NM_018850.2	NM_018850.2		5244	112380624	NM_018850.2	ABCB4	NP_061338.1	ILMN_1767349	0001070594	A	3497	GCCCTCATCAGACAACCTCAAATCCTCCTGTTGGATGAAGCTACATCAGC	7	-	87032472-87032521	7q21.12a	Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 4 (ABCB4), transcript variant C, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7912658] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7912658] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7912658] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8106172] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 7912658] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out) [goid 8559] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	PGY3; PFIC-3; MDR2/3; MDR3; MDR2; ABC21; GBD1	PGY3; PFIC-3; MDR2/3; MDR3; ABC21
Homo sapiens	RefSeq	XM_943735.1	ILMN_173201	LOC728723	XM_001131815.1	XM_001131815.1		728723	113416650	XM_001131815.1	LOC728723	XP_001131815.1	ILMN_1692589	0006180767	A	168	GAAGGCGGCGCTTATTGGTGTTCACCAAAACACCAGCATGGTGTACCAGC	5	+	76419131-76419180	5q14.1a	PREDICTED: Homo sapiens hypothetical protein LOC728723 (LOC728723), mRNA.					
Homo sapiens	RefSeq	NM_018682.2	ILMN_9061	MLL5	NM_018682.3	NM_018682.3		55904	91199542	NM_018682.3	MLL5	NP_061152.3	ILMN_1783606	0002100653	A	5874	GCATCTCCAGTGCCTGGACAGATTCCAATTCACAGAGCACAGGTGCCACC	7	+	104540927-104540976	7q22.2a	Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) (MLL5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KMT2E; MGC70452; FLJ14026; FLJ10078; HDCMC04P	MGC70452; FLJ14026; FLJ10078; HDCMC04P
Homo sapiens	RefSeq	NM_024408.2	ILMN_28650	NOTCH2	NM_024408.2	NM_024408.2		4853	24041034	NM_024408.2	NOTCH2	NP_077719.2	ILMN_1777845	0001190176	A	3404	AGCTGCCCCCTGGGCTACACTGGGAAAAACTGTCAGACCCTGGTGAATCT	1	-	120480619-120480633:120483178-120483212	1p12a	Homo sapiens Notch homolog 2 (Drosophila) (NOTCH2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1303260] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9244302] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 9244302] [evidence IDA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [pmid 9244302] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9244302] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12531696] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12531696] [evidence TAS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 11306509] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9244302] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12760378] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 11306509] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 12531696] [evidence IEP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 11306509] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [pmid 11306509] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 1303260] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [pmid 11306509] [evidence IDA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]	 [goid 3706] [pmid 9244302] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9244302] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12531696] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9244302] [evidence NAS]	hN2; AGS2	hN2; AGS2
Homo sapiens	RefSeq	NM_080284.2	ILMN_1927	ABCA6	NM_080284.2	NM_080284.2		23460	27436952	NM_080284.2	ABCA6	NP_525023.2	ILMN_1795507	0006940519	I	2122	CAGAGATCAAGTGTGGAGCCTCCTGAGAGAGCGTAGAGCAGATCATGTGA	17	-	67109407-67109456	17q24.2c-q24.3a	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 6 (ABCA6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	FLJ43498; EST155051	FLJ43498; EST155051
Homo sapiens	RefSeq	NM_172346.1	ILMN_1927	ABCA6	NM_080284.2	NM_080284.2		23460	27436952	NM_080284.2	ABCA6	NP_525023.2	ILMN_1701551	0003400753	A	4809	CCTATAAGCTGCCCGTGGCAGACGTTTACCCTCTATCACAGACCTTTCAC	17	-	67077219-67077268	17q24.2c-q24.3a	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 6 (ABCA6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	FLJ43498; EST155051	EST155051
Homo sapiens	RefSeq	NM_001727.1	ILMN_162849	BRS3	NM_001727.1	NM_001727.1		680	4502454	NM_001727.1	BRS3	NP_001718.1	ILMN_1756165	0001230541	S	1207	CTGAGCCTCCTGTTGCTGACACCTCTCTTACCACCCTGGCTGTGATGGGA	X	+	135402058-135402107	Xq26.3b	Homo sapiens bombesin-like receptor 3 (BRS3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9367152] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9367152] [evidence TAS]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [pmid 9367152] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 9367152] [evidence TAS]; Feeding behavior in a fully developed and mature organism [goid 8343] [pmid 9367152] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with bombesin to initiate a change in cell activity [goid 4946] [pmid 8383682] [evidence TAS]		
Homo sapiens	RefSeq	NM_016280.1	ILMN_5457	CES4	NM_016280.1	NM_016280.1		51716	7706474	NM_016280.1	CES4	NP_057364.1	ILMN_1767415	0006900348	S	1895	TGATCGATAGGAATCCAGACCTAGGCTGAGGATCGCCCACTGGAGCCAGT	16	+	54365975-54366024	16q12.2c	Homo sapiens carboxylesterase 4-like (CES4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10452915] [evidence TAS]	The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10452915] [evidence TAS]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [pmid 10452915] [evidence TAS]	PCE-3; CESR	PCE-3; CESR
Homo sapiens	RefSeq	NM_001014840.1	ILMN_10139	CUTA	NM_001014840.1	NM_001014840.1		51596	62526025	NM_001014840.1	CUTA	NP_001014840.1	ILMN_2311989	0003120707	A	494	CTGCAGCCTTTGTTACTTGCCCCAACGAGAAGGTCGCCAAGGAGATCGCC	6	-	33493237-33493286	6p21.32a	Homo sapiens cutA divalent cation tolerance homolog (E. coli) (CUTA), transcript variant 5, mRNA.				MGC111154; ACHAP; C6orf82	MGC111154; C6orf82; ACHAP
Homo sapiens	RefSeq	NM_173665.1	ILMN_14630	C5ORF36	NM_173665.1	NM_173665.1		285600	27734814	NM_173665.1	C5orf36	NP_775936.1	ILMN_2121147	0002260072	S	1799	AAAATTCTGTATTGTAGTTGATTAGGAAGGTATAACATTTTACTATAGCT	5	-	93881062-93881111	5q15b	Homo sapiens chromosome 5 open reading frame 36 (C5orf36), mRNA.				MGC34713; DKFZp686F0372	MGC34713; DKFZp686F0372
Homo sapiens	RefSeq	NM_173665.1	ILMN_14630	C5ORF36	NM_173665.1	NM_173665.1		285600	27734814	NM_173665.1	C5orf36	NP_775936.1	ILMN_1791650	0004050736	S	1161	CAAGAGCTCCAGCAAGCATAGAGGAGCAGTGCATGCTTTGGGTTAGTGAC	5	-	93881700-93881703:93881704-93881749	5q15b	Homo sapiens chromosome 5 open reading frame 36 (C5orf36), mRNA.				MGC34713; DKFZp686F0372	MGC34713; DKFZp686F0372
Homo sapiens	RefSeq	XM_001131151.1	ILMN_182215	LOC391142	XM_001131151.1	XM_001131151.1		391142	113412470	XM_001131151.1	LOC391142	XP_001131151.1	ILMN_3296870	0002470274	M	754	TCAGTCTCCTCGGGGCTTGGGGGCATTTTCAGAAGCCACCCGCAGAACCA				1q25.3a	PREDICTED: Homo sapiens hypothetical LOC391142 (LOC391142), mRNA.					
Homo sapiens	RefSeq	NM_152422.3	ILMN_10895	PTPDC1	NM_152422.3	NM_152422.3		138639	30089951	NM_152422.3	PTPDC1	NP_689635.3	ILMN_1810011	0000990653	I	215	AAGCTGCTGTCCTCGTCCTCTCTCCAGGTGATGGTGGCTGTTTCCTCAGT	9	+	95886781-95886830	9q22.32a	Homo sapiens protein tyrosine phosphatase domain containing 1 (PTPDC1), transcript variant 1, mRNA.		The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ42922; PTP9Q22	FLJ42922; PTP9Q22
Homo sapiens	RefSeq	NM_152422.3	ILMN_10895	PTPDC1	NM_152422.3	NM_152422.3		138639	30089951	NM_152422.3	PTPDC1	NP_689635.3	ILMN_1761031	0003520220	A	4007	TGGGAAATTGAGTCCAGTGGATGTTAATGGAGTGGGTTGCCCATCCCTGA	9	+	95911566-95911615	9q22.32a	Homo sapiens protein tyrosine phosphatase domain containing 1 (PTPDC1), transcript variant 1, mRNA.		The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ42922; PTP9Q22	FLJ42922; PTP9Q22
Homo sapiens	RefSeq	NM_003904.3	ILMN_17539	ZNF259	NM_003904.3	NM_003904.3		8882	54114987	NM_003904.3	ZNF259	NP_003895.1	ILMN_1753790	0007050561	S	1347	TGAGGAGCTAGGGCTCAATGACATGAAGACAGAGGGCTATGAGGCAGGCC	11	-	116649657-116649706	11q23.3b	Homo sapiens zinc finger protein 259 (ZNF259), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8650580] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9763455] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9763455] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8650580] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9763455] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC110983; ZPR1	MGC110983; ZPR1
Homo sapiens	RefSeq	NM_000395.1	ILMN_5898	CSF2RB	NM_000395.1	NM_000395.1		1439	4559407	NM_000395.1	CSF2RB	NP_000386.1	ILMN_1798475	0003450349	S	2756	AGGGCTTGCCTTCCCTCCCGCCTGACCTTCCTCAGTCATTTCTGCAAAGC	22	+	35664524-35664573	22q12.3d	Homo sapiens colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) (CSF2RB), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The heterodimeric receptor for granulocyte macrophage colony-stimulating factor [goid 30526] [pmid 9410898] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1702217] [evidence NAS]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 9410898] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9410898] [evidence TAS]; Combining with interleukin-3 to initiate a change in cell activity [goid 4912] [pmid 9410898] [evidence TAS]; Combining with interleukin-5 to initiate a change in cell activity [goid 4914] [pmid 9410898] [evidence TAS]	IL3RB; CDw131; CD131; IL5RB	IL3RB; CDw131; CD131; IL5RB
Homo sapiens	RefSeq	NM_147200.1	ILMN_13478	TRAF3IP2	NM_147200.1	NM_147200.1		10758	22538425	NM_147200.1	TRAF3IP2	NP_671733.1	ILMN_1663381	0006940435	I	100	CTTGTGATGGCGTGAAGGAAAGCCATGGCAGATTTCCAGCCTGGTGATGC	6	-	112029137-112029186	6q21h	Homo sapiens TRAF3 interacting protein 2 (TRAF3IP2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10962033] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]		C6orf6; CIKS; C6orf5; MGC3581; C6orf4; DKFZP586G0522; ACT1	CIKS; C6orf5; MGC3581; DKFZP586G0522; C6orf6; C6orf4; ACT1
Homo sapiens	RefSeq	NM_003299.1	ILMN_27563	HSP90B1	NM_003299.1	NM_003299.1		7184	4507676	NM_003299.1	HSP90B1	NP_003290.1	ILMN_2096116	0002480326	S	2612	CCCCTTCTCCCCTGCACTGTAAAATGTGGGATTATGGGTCACAGGAAAAA	12	+	102865665-102865714	12q23.3a	Homo sapiens heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16130169] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 10497210] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10497210] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 10497210] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9596688] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 10497210] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 15620698] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10497210] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 15192333] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [pmid 15845869] [evidence NAS]; The process of binding or confining calcium ions such that they are separated from other components of a biological system [goid 51208] [pmid 15192333] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11958450] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10497210] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a virion, either by binding to components of the capsid or the viral envelope [goid 46790] [pmid 11958450] [evidence IPI]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [pmid 15082773] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	GP96; GRP94; TRA1; ECGP	GP96; GRP94; TRA1; ECGP
Homo sapiens	RefSeq	XM_372952.3	ILMN_33837	LOC391427	XM_372952.3	XM_372952.3		391427	88953636	XM_372952.3	LOC391427	XP_372952.2	ILMN_1798573	0000780470	S	404	GTCTGCACTGTCCTAGCTACTCCTCCTGGTGCCTCCATCTGCTGAGAACA	2	+	113880970-113881019		PREDICTED: Homo sapiens similar to Ig kappa chain V-I region Walker precursor (LOC391427), mRNA.					
Homo sapiens	RefSeq	NM_001001977.1	ILMN_1383	ATP5E	NM_001001977.1	NM_001001977.1		514	50345992	NM_001001977.1	ATP5E	NP_001001977.1	ILMN_3261197	0003710725	M	27	TCTGATCTTCCTGCGGCTGAACCGCCCGGCTGAGCCGACATTGCCGGCGT	20	-	57607346-57607395	20q13.32b	Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit (ATP5E), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 12110673] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 4517936] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled [goid 45261] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12110673] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	MGC104243; ATPE	MGC104243; ATPE
Homo sapiens	RefSeq	NR_029513.1	ILMN_387988	MIR98	NR_029513.1	NR_029513.1		407054	262205752	NR_029513.1	MIR98		ILMN_3308592	0004900280	S	6	CTGCTCATGCCAGGGTGAGGTAGTAAGTTGTATTGTTGTGGGGTAGGGAT				Xp11.22a	Homo sapiens microRNA 98 (MIR98), microRNA.					
Homo sapiens	RefSeq	NM_014902.2	ILMN_182055	DLGAP4	NM_001042486.1	NM_001042486.1		22839	109891937	NM_001042486.1	DLGAP4	NP_001035951.1	ILMN_1754842	0005810008	A	2711	CTGAGGGGCTGCTCTATGCTGTGTATGCGCCTCTCTGGCATCCGAGACAT	20	+	34590183-34590232	20q11.23a	Homo sapiens discs, large (Drosophila) homolog-associated protein 4 (DLGAP4), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]			RP5-977B1.6; KIAA0964; MGC131862; SAPAP4; DAP4	RP5-977B1.6; KIAA0964; SAPAP4; DAP4
Homo sapiens	Unigene	Hs.542669	ILMN_106440	HS.542669	Hs.542669		Hs.542669		4301782	AI435238			ILMN_1915996	0002350474	S	182	GCTGCCTTCAGCTTCACAGACAAAGTCAGGGTAGAAACAGGGTCTGAGGG	22	+	48320265-48320314		ti02a06.x1 NCI_CGAP_CLL1 Homo sapiens cDNA clone IMAGE:2129266 3, mRNA sequence					
Homo sapiens	RefSeq	XM_945180.1	ILMN_162949	UNC13C	NM_001080534.1	NM_001080534.1		440279	122937513	NM_001080534.1	UNC13C	NP_001074003.1	ILMN_1678448	0004920719	A	7969	GACTGTCAGAACCATTCTGCAACTGAGTATGAAATCACAGACCAGTGAGG	15	+	52707927-52707976	15q21.3a-q21.3b	Homo sapiens unc-13 homolog C (C. elegans) (UNC13C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp547H074	
Homo sapiens	RefSeq	NM_001080534.1	ILMN_162949	UNC13C	NM_001080534.1	NM_001080534.1		440279	122937513	NM_001080534.1	UNC13C	NP_001074003.1	ILMN_2306661	0001660152	A	8044	GGCCACTGCTTTGTTAATGACTCCTCTAAATGCATAGTGTGATGCGATCC	15	+	52708002-52708051	15q21.3a-q21.3b	Homo sapiens unc-13 homolog C (C. elegans) (UNC13C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp547H074	DKFZp547H074
Homo sapiens	RefSeq	NM_022304.1	ILMN_666	HRH2	NM_022304.1	NM_022304.1		3274	13435404	NM_022304.1	HRH2	NP_071640.1	ILMN_1722411	0001070730	S	1499	CCAGGACCCAAAGCCGAGAACCCAGGCAACAGGAAGAGAAACCCCTGAAG	5	+	175043816-175043865	5q35.2c	Homo sapiens histamine receptor H2 (HRH2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1714721] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9725260] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 9725260] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans [goid 4969] [pmid 9725260] [evidence TAS]	H2R	H2R
Homo sapiens	RefSeq	NM_024779.3	ILMN_8650	PIP4K2C	NM_024779.3	NM_024779.3		79837	37059743	NM_024779.3	PIP4K2C	NP_079055.2	ILMN_1787308	0001580431	S	2779	CTCCAAAGGTGGTAGCAAGAGGAGTACCCAGTTAGGGGTTGGAGCCCCCA	12	+	56283153-56283202	12q13.3b	Homo sapiens phosphatidylinositol-5-phosphate 4-kinase, type II, gamma (PIP4K2C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16309] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18255255] [evidence IPI]	FLJ22055; PIP5K2C	FLJ22055; PIP5K2C
Homo sapiens	RefSeq	NM_032292.3	ILMN_14180	GON4L	NM_001037533.1	NM_001037533.1		54856	82830423	NM_001037533.1	GON4L	NP_001032622.1	ILMN_1740770	0002650347	S	4390	GCCAGAAACTGGAGGAGAGAAGAATGGGCCAGAAGAAGAGGAAGAAGAGG	1	-	155734873-155734922	1q22b-q22c	Homo sapiens gon-4-like (C. elegans) (GON4L), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC138817; FLJ23040; FLJ20203; KIAA1606; MGC138818; FLJ12923; GON4; RP11-101O6.1; DKFZp761I241; RP11-243J18.4; GON-4	FLJ23040; FLJ20203; KIAA1606; FLJ12923; RP11-101O6.1; DKFZp761I241; RP11-243J18.4; GON-4
Homo sapiens	RefSeq	XM_937953.1	ILMN_14180	GON4L	NM_001037533.1	NM_001037533.1		54856	82830423	NM_001037533.1	GON4L	NP_001032622.1	ILMN_1661138	0001440091	S	7442	GGAGAGGAAACAGAGACCTGTAGATGGATGATTATTCTGCCCTGGGACTC	1	-	155719655-155719704	1q22b-q22c	Homo sapiens gon-4-like (C. elegans) (GON4L), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC138817; FLJ23040; FLJ20203; KIAA1606; MGC138818; FLJ12923; GON4; RP11-101O6.1; DKFZp761I241; RP11-243J18.4; GON-4	
Homo sapiens	RefSeq	XM_056680.7	ILMN_309443	C12ORF56	NM_001099676.1	NM_001099676.1		115749	153791217	NM_001099676.1	C12orf56	NP_001093146.1	ILMN_1770616	0006040452	A	1298	TGCCAGCCTTGCAGAAAAGGCTCCCATTGTGTTACCCCATCACTCAACCT	12	-	62947271-62947320	12q14.2b	Homo sapiens chromosome 12 open reading frame 56 (C12orf56), mRNA.					
Homo sapiens	RefSeq	NM_175847.1	ILMN_20407	PTBP1	NM_175847.1	NM_175847.1		5725	28558997	NM_175847.1	PTBP1	NP_787041.1	ILMN_2333319	0006060332	A	2006	ACGCACATTCCGTTGCCTTACCCGATGGCTTGTGACGCGGAGAGAACCGA	19	+	763151-763200	19p13.3i	Homo sapiens polypyrimidine tract binding protein 1 (PTBP1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1641332] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 1641332] [evidence TAS]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 1641332] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 1906036] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10653975] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16373488] [evidence IPI]; Interacting selectively with any stretch of pyrimidines (cytosine or uracil) in an RNA molecule [goid 8187] [pmid 1906036] [evidence TAS]	HNRNPI; PTB-T; PTB3; PTB-1; MGC8461; HNRPI; HNRNP-I; PTB2; MGC10830; PTB; PTB4; pPTB	HNRNPI; PTB-T; PTB3; PTB-1; MGC8461; HNRPI; HNRNP-I; PTB2; MGC10830; PTB; PTB4; pPTB
Homo sapiens	RefSeq	NM_001004466.1	ILMN_25506	OR10H5	NM_001004466.1	NM_001004466.1		284433	52218843	NM_001004466.1	OR10H5	NP_001004466.1	ILMN_1764050	0001240619	S	358	TACGACCGCTACGTGGCCATCTGCCACCCCCTGCGTTACAACGTGCTCAT	19	+	15766216-15766265	19p13.12a	Homo sapiens olfactory receptor, family 10, subfamily H, member 5 (OR10H5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR19-26; OR19-25	OR19-26; OR19-25
Homo sapiens	RefSeq	NM_015168.1	ILMN_179655	ZC3H4	NM_015168.1	NM_015168.1		23211	126723059	NM_015168.1	ZC3H4	NP_055983.1	ILMN_2087575	0005820608	S	5784	GAAGCTGGAGCCCTCCTCTTGGAATATTCAGCCTAAGAACCTCATAGGAC	19	-	52259569-52259618	19q13.32b	Homo sapiens zinc finger CCCH-type containing 4 (ZC3H4), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C19orf7; KIAA1064	C19orf7; KIAA1064
Homo sapiens	RefSeq	NR_029868.1	ILMN_388198	MIR376A1	NR_029868.1	NR_029868.1		494325	262206234	NR_029868.1	MIR376A1		ILMN_3308465	0004900189	S	13	CTCCTTCTATGAGTACATTATTTATGATTAATCATAGAGGAAAATCCACG				14q32.31a	Homo sapiens microRNA 376a-1 (MIR376A1), microRNA.					
Homo sapiens	RefSeq	XM_928598.1	ILMN_45362	LOC645582	XM_928598.1	XM_928598.1		645582	89039602	XM_928598.1	LOC645582	XP_933691.1	ILMN_1794962	0004290682	S	1	ATGGACGAGCTCTGCCCTCGAGCACTCACTGTGGGCTCCCGACCGTCACT	16	-	25951-25992:26374-26381		PREDICTED: Homo sapiens similar to Interleukin-9 receptor precursor (IL-9R) (CD129 antigen) (LOC645582), mRNA.					
Homo sapiens	RefSeq	NM_144680.2	ILMN_13510	ZNF18	NM_144680.2	NM_144680.2		7566	56118253	NM_144680.2	ZNF18	NP_653281.2	ILMN_1806713	0001230274	S	2572	ATGGGATTAGCTGTAGTCACTGCTTATGGGAAGAACCTCAGATCAGCCCC	17	-	11880907-11880956	17p12d	Homo sapiens zinc finger protein 18 (ZNF18), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX11; ZKSCAN6; HDSG1; ZNF535; Zfp535	KOX11; ZKSCAN6; HDSG1; ZNF535; Zfp535
Homo sapiens	Unigene	Hs.550307	ILMN_110259	HS.550307	Hs.550307		Hs.550307		7280614	AW593356			ILMN_1855412	0006510411	S	369	GATTGCTCTACAGGCATTTCTGGCTCCGTGATCCCATGACCTCAAAGGGG	1	+	40399398-40399436		hg13f09.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2945513 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001037732.1	ILMN_22261	DEFB128	NM_001037732.1	NM_001037732.1		245939	83582801	NM_001037732.1	DEFB128	NP_001032821.1	ILMN_2070583	0002100091	S	14	TGGTTCTCATTATTCTGCTGTTTGAGGTACTCACAGACGGGGCAAGACTC	20	-	168745-168759:170216-170250	20p13f	Homo sapiens defensin, beta 128 (DEFB128), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		hBD-28; DEFB-28; DEFB28	hBD-28; DEFB-28; DEFB28
Homo sapiens	RefSeq	NR_031599.1	ILMN_388525	MIR1231	NR_031599.1	NR_031599.1		100302158	269847056	NR_031599.1	MIR1231		ILMN_3308520	0004590095	S	35	GACCAAGGCTTGCTGTCTGTCCAGTCTGCCACCCTACCCTGTCTGTTCTT					Homo sapiens microRNA 1231 (MIR1231), microRNA.					
Homo sapiens	RefSeq	NM_001032360.1	ILMN_7546	MMP19	NM_001032360.1	NM_001032360.1		4327	75905805	NM_001032360.1	MMP19	NP_001027531.1	ILMN_1782953	0007150551	A	45	GCACTGCTCCCCCAAGGCTCCCAGAAATCTCAGGTCAGAGGCACGGACAG	12	-	54522908-54522957	12q13.2c	Homo sapiens matrix metallopeptidase 19 (MMP19), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10809722] [evidence NAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9020145] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MMP18; RASI-1	MMP18; RASI-1
Homo sapiens	RefSeq	NM_006018.1	ILMN_22584	GPR109B	NM_006018.1	NM_006018.1		8843	5174460	NM_006018.1	GPR109B	NP_006009.1	ILMN_1677693	0003180220	A	1104	CTCCGGTGAGCCATGGAGCCCCTCTTATCTGGGCCCAACCTCAAATAACC	12	-	121766144-121766193	12q24.31c	Homo sapiens G protein-coupled receptor 109B (GPR109B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7505609] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7505609] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	PUMAG; HM74; Puma-g	PUMAG; HM74; Puma-g
Homo sapiens	RefSeq	NR_002725.1	ILMN_4938	INE2	NR_002725.1	NR_002725.1		8551	84872004	NR_002725.1	INE2		ILMN_3238420	0007100332	S	921	ACTGTAACAATAGGAAGTCTTTCACCAACCACTAATACTGTAAAGAAAGC	X	-	15714663-15714712	Xp22.2	Homo sapiens inactivation escape 2 (non-protein coding) (INE2), non-coding RNA.					
Homo sapiens	RefSeq	NM_000799.2	ILMN_6125	EPO	NM_000799.2	NM_000799.2		2056	62240996	NM_000799.2	EPO	NP_000790.2	ILMN_1665671	0002680408	S	1147	ACTTAGGTGGCAAGCTGTGACTTCTCCAGGTCTCACGGGCATGGGCACTC	7	+	100159076-100159125	7q22.1c	Homo sapiens erythropoietin (EPO), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3838366] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 3838366] [evidence NAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 3838366] [evidence NAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9722506] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42523] [pmid 9722506] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [pmid 9722506] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 9722506] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [pmid 9722506] [evidence IDA]	Interacting selectively with the erythropoietin receptor [goid 5128] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC138142; EP	MGC138142; EP
Homo sapiens	RefSeq	XM_933027.1	ILMN_45771	LOC645648	XM_933027.1	XM_933027.1		645648	88997857	XM_933027.1	LOC645648	XP_938120.1	ILMN_1711098	0004480082	S	23	GGACGGACGGACGGGGCAGCCGTGCTCACAGCTCAGCAGCGCGGGGCCTT	6	-	144371014-144371063		PREDICTED: Homo sapiens similar to hydatidiform mole associated and imprinted (LOC645648), mRNA.					
Homo sapiens	RefSeq	NM_152335.1	ILMN_17133	C15ORF27	NM_152335.2	NM_152335.2		123591	118442840	NM_152335.2	C15orf27	NP_689548.2	ILMN_1808956	0006580008	S	2165	GGAATCCTGGGTGGAGTCCAACACAATCACACGGAGACCACCATCTGAGC	15	+	74284125-74284174	15q24.2a	Homo sapiens chromosome 15 open reading frame 27 (C15orf27), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	FLJ30304; FLJ38190	FLJ38190
Homo sapiens	RefSeq	NR_000015.1	ILMN_1655	SNORD55	NR_000015.2	NR_000015.2		26811	94721316	NR_000015.2	SNORD55		ILMN_1680393	0004180408	S	19	GTAATGCTGCATACTCCCGAGTGCGCGGTGGGGAAGCCAACCTTGGAGAG	1	+	45014142-45014191	1p34.1d	Homo sapiens small nucleolar RNA, C/D box 55 (SNORD55), small nucleolar RNA.				U39; U55; RNU55; RNU39; SNORD39	U39
Homo sapiens	RefSeq	NR_031682.1	ILMN_388605	MIR1276	NR_031682.1	NR_031682.1		100302121	269847412	NR_031682.1	MIR1276		ILMN_3308698	0001940411	S	8	AGGTAAAGAGCCCTGTGGAGACACCTGGATTCAGAGAACATGTCTCCACT					Homo sapiens microRNA 1276 (MIR1276), microRNA.					
Homo sapiens	RefSeq	NM_152792.1	ILMN_15163	ASPRV1	NM_152792.1	NM_152792.1		151516	22758145	NM_152792.1	ASPRV1	NP_690005.1	ILMN_1762284	0004860255	S	1922	AACTGTGGGACCCCTTCAGATTCCCTGAGGTATGGCTTGGTCACTCTCAG	2	-	70040930-70040979	2p14a	Homo sapiens aspartic peptidase, retroviral-like 1 (ASPRV1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 16098038] [evidence RCA]	The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [pmid 16098038] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 16098038] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MUNO; SASPase; SASP; Taps	MUNO; SASPase; SASP; Taps
Homo sapiens	RefSeq	NM_015156.1	ILMN_21195	RCOR1	NM_015156.2	NM_015156.2		23186	126352645	NM_015156.2	RCOR1	NP_055971.1	ILMN_1743421	0004280286	S	1368	GTCCCCAGATAATTCCATTAAGATGCCCGAAGAGGAAGACGAGGCTCCTG	14	+	102258464-102258506:102262558-102262564	14q32.31c-q32.32a	Homo sapiens REST corepressor 1 (RCOR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12192000] [evidence IPI]	COREST; KIAA0071; RCOR	COREST; KIAA0071; RCOR
Homo sapiens	RefSeq	NM_007252.2	ILMN_178194	POU6F2	NM_007252.2	NM_007252.2		11281	51873039	NM_007252.2	POU6F2	NP_009183.3	ILMN_1773914	0000870192	S	1858	AAAAAGCGCAAGCGGCGCACCTCCTTCACACCCCAGGCCCTTGAGATCCT	7	+	39470550-39470599	7p14.1d	Homo sapiens POU class 6 homeobox 2 (POU6F2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8601806] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8601806] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8601806] [evidence TAS]; Process by which a cell becomes capable of differentiating autonomously into a ganglion mother cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7402] [pmid 8601806] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8601806] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 8601806] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8601806] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	WTSL; WT5; RPF-1	WTSL; RPF-1; WT5
Homo sapiens	Unigene	Hs.534945	ILMN_102674	HS.534945	Hs.534945		Hs.534945		51458735	XM_498731			ILMN_1896703	0002100520	S	625	GTGCGCCACAGCAAAACTCCGTCACCACAGCAGCAGATGGCTCCGAAGAA					PREDICTED: Homo sapiens LOC440554 (LOC440554), mRNA					
Homo sapiens	RefSeq	NM_020729.1	ILMN_18003	ODF2L	NM_020729.1	NM_020729.1		57489	55749695	NM_020729.1	ODF2L	NP_065780.1	ILMN_1800517	0002900482	I	488	GACTGAATTGGAAGCAACACTTAAGGAAGCGGAGTTGGTAACTCATTCTG	1	-	86851196-86851245	1p22.3c	Homo sapiens outer dense fiber of sperm tails 2-like (ODF2L), transcript variant 1, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC111060; dJ977L11.1; RP5-977L11.1; KIAA1229	MGC111060; dJ977L11.1; RP5-977L11.1; KIAA1229
Homo sapiens	RefSeq	NM_003296.1	ILMN_29809	CRISP2	NM_003296.1	NM_003296.1		7180	4507670	NM_003296.1	CRISP2	NP_003287.1	ILMN_1775569	0004280487	S	1082	GCAATGCATCTTCTCCCCCAGATCATCACAGAAATCACTTTCAGGCAATG	6	-	49768282-49768331	6p12.3b	Homo sapiens cysteine-rich secretory protein 2 (CRISP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8665901] [evidence TAS]			MGC111136; TPX1; GAPDL5; TSP1; CRISP-2	MGC111136; TPX1; GAPDL5; TSP1; CRISP-2
Homo sapiens	RefSeq	NM_007227.3	ILMN_22885	GPR45	NM_007227.3	NM_007227.3		11250	31083314	NM_007227.3	GPR45	NP_009158.3	ILMN_2052487	0001170678	S	1617	CTGCACCTGCTCAAGAGAAACCCTGAGAAACCCCAGTAGGTGTGAGCTCC	2	+	105226248-105226297	2q12.1d	Homo sapiens G protein-coupled receptor 45 (GPR45), mRNA.				PSP24A; PSP24; PSP24(ALPHA)	PSP24A; PSP24; PSP24(ALPHA)
Homo sapiens	Unigene	Hs.539339	ILMN_104453	HS.539339	Hs.539339		Hs.539339		14340262	BG940890			ILMN_1848202	0004200154	S	66	CCTGCCTAAAGATCTCTGATAAAGGAGGCCTTCATTTTCTTCCATACCCC	12	+	65904868-65904917		ax08a12.x1 Proliferating Human Erythroid Cells (LCB:ax library) Homo sapiens cDNA clone ax08a12 random, mRNA sequence					
Homo sapiens	Unigene	Hs.564127	ILMN_116845	HS.564127	Hs.564127		Hs.564127		19013407	BM700149			ILMN_1905832	0006620180	S	588	CATCCGAGATTAGGCTGTGAAATAGGAAGTGGGGTTACAGGCAGATCCGC					UI-E-DW1-ahc-g-05-0-UI.r1 UI-E-DW1 Homo sapiens cDNA clone UI-E-DW1-ahc-g-05-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	XM_928856.1	ILMN_41645	LOC645882	XM_928856.1	XM_928856.1		645882	89029870	XM_928856.1	LOC645882	XP_933949.1	ILMN_1665244	0006330156	S	164	TGGACCCAGAGGTGGATGGGAAGATGCCACCAGAGAAGATGCCACTAGCC	9	-	89606805-89606854		PREDICTED: Homo sapiens similar to Death-associated protein kinase 1 (DAP kinase 1) (LOC645882), mRNA.					
Homo sapiens	RefSeq	NM_005886.1	ILMN_19547	KATNB1	NM_005886.2	NM_005886.2		10300	83779013	NM_005886.2	KATNB1	NP_005877.2	ILMN_1735735	0003190022	S	2471	AGGAGGTGATGCTGGTCCCTGGCCACCTCTACAGCCCTGAACTCTTGAGA	16	+	56348488-56348537	16q13d	Homo sapiens katanin p80 (WD repeat containing) subunit B 1 (KATNB1), mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [pmid 10751153] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10751153] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa) [goid 8352] [pmid 10751153] [evidence TAS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 10751153] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [pmid 10751153] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of microtubule depolymerization [goid 31117] [pmid 10751153] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 10751153] [evidence NAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP [goid 8568] [pmid 10751153] [evidence IDA]; Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10751153] [evidence IPI]	KAT	KAT
Homo sapiens	RefSeq	XM_943946.1	ILMN_138305	EPS8L2	XM_943946.1	XM_943946.1		64787	89034417	XM_943946.1	EPS8L2	XP_949039.1	ILMN_1788553	0006290360	I	1883	CAGCAAGGGGGTCCTGGTGGGCCAGTTCTGGAGAGGCAGGGCTGACTTCA				11p15.5d-p15.5c	PREDICTED: Homo sapiens EPS8-like 2, transcript variant 4 (EPS8L2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	Unigene	Hs.561430	ILMN_114866	HS.561430	Hs.561430		Hs.561430		4682151	AI630821			ILMN_1830259	0004830133	S	295	CACCGTGAGGGCAACCACATTCTCCTGGCATGCTTGAACCCACCACTCAG	5	+	16503765-16503814		tx53f04.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2273311 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001718994.1	ILMN_337099	LOC100132098	XM_001718994.1	XM_001718994.1		100132098	169213500	XM_001718994.1	LOC100132098	XP_001719046.1	ILMN_3237483	0002970605	S	2416	GGACCTGGTTCACCCTCGTTGCCTAGGCTGGAGTGCCATGGCGCGATCTT	19	-	19628-19677	19p13.3j	PREDICTED: Homo sapiens hypothetical protein LOC100132098 (LOC100132098), mRNA.					
Homo sapiens	RefSeq	XM_939838.1	ILMN_40204	LOC650755	XM_939838.1	XM_939838.1		650755	89034954	XM_939838.1	LOC650755	XP_944931.1	ILMN_1768165	0000060161	S	1210	GGACAACGGGGAATTAAGGGGAAAAACACCCCTGGCATCCACACGAAGGC					PREDICTED: Homo sapiens similar to cytoplasmic beta-actin (LOC650755), mRNA.					
Homo sapiens	RefSeq	NM_001033523.1	ILMN_22373	GUSBL1	NM_001033523.1	NM_001033523.1		387036	75905496	NM_001033523.1	GUSBL1	NP_001028695.1	ILMN_1780700	0006660563	S	250	TGATGGCCTGCACTCCACACAATGCAACAGAGTGAAGGAGCAGGTTCTGG	6	-	27000973-27001022	6p22.1d	Homo sapiens glucuronidase, beta-like 1 (GUSBL1), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	bA239L20.5; bGLU-Lp; SMAC3L; b55C20.1; GUSBP4; bA239L20.1; SMAC3L2; SMA3-L; GUSBP2	bA239L20.5; bGLU-Lp; SMAC3L; b55C20.1; GUSBP4; bA239L20.1; SMAC3L2; SMA3-L; GUSBP2
Homo sapiens	RefSeq	NM_002946.3	ILMN_12825	RPA2	NM_002946.3	NM_002946.3		6118	34147622	NM_002946.3	RPA2	NP_002937.1	ILMN_1753582	0003420561	S	1594	TGACGTGTGTTTCTGTGAACATGAAGTTCTGCGGTAGTGCCTCCAGGGGC	1	-	28218125-28218174	1p35.3b	Homo sapiens replication protein A2, 32kDa (RPA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9826763] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11080452] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [pmid 16135809] [evidence IPI]	The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 2406247] [evidence TAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 2406247] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12509449] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15897895] [evidence IPI]	REPA2; RPA32	REPA2; RPA32
Homo sapiens	RefSeq	NR_029628.1	ILMN_388247	MIR215	NR_029628.1	NR_029628.1		406997	262206310	NR_029628.1	MIR215		ILMN_3309074	0004050615	S	53	GCTGAGTTTGTCTGTCATTTCTTTAGGCCAATATTCTGTATGACTGTGCT				1q41d	Homo sapiens microRNA 215 (MIR215), microRNA.					
Homo sapiens	RefSeq	XM_001721820.1	ILMN_341886	LOC100131857	XM_001721820.1	XM_001721820.1		100131857	169216735	XM_001721820.1	LOC100131857	XP_001721872.1	ILMN_3284000	0005080176	M	382	CCTCTAAATAGGGAAAAGCTAGGGCTGGAAGACACGGCACCCACCTCCTG	X	-	153254916-153254965	Xq28g	PREDICTED: Homo sapiens hypothetical protein LOC100131857 (LOC100131857), mRNA.					
Homo sapiens	RefSeq	NM_000209.3	ILMN_365539	PDX1	NM_000209.3	NM_000209.3		3651	189095257	NM_000209.3	PDX1	NP_000200.1	ILMN_3249216	0004120427	S	2220	GCACAGTGGCCTGGTGCGCCTTGGAAACCAACAACTATTCACGAGCCAGT	13	+	28500098-28500147	13q12.2b	Homo sapiens pancreatic and duodenal homeobox 1 (PDX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 8954967] [evidence TAS]; A series of molecular signals mediated by the detection of nitric oxide (NO) [goid 7263] [pmid 17941991] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 8988180] [evidence TAS]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [pmid 17941991] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 8954967] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	XM_001721405.1	ILMN_337198	LOC100132655	XM_001721405.1	XM_001721405.1		100132655	169165532	XM_001721405.1	LOC100132655	XP_001721457.1	ILMN_3278245	0004670128	M	351	CTCTCCTCACCAAAGGCACTGCCAGGACTTACCGTACAACACTCCTTGGC				3q13.31a-q13.31b	PREDICTED: Homo sapiens hypothetical protein LOC100132655 (LOC100132655), mRNA.					
Homo sapiens	RefSeq	XM_374801.3	ILMN_45384	FLJ00312	XM_374801.3	XM_374801.3		399761	89031134	XM_374801.3	FLJ00312	XP_374801.3	ILMN_1660982	0002940608	I	1321	CCCAACTGGTGAAGTACTGAGAGGAAGCTACACAAAAGGCAGCAAGGTAT	10	-	48556260-48556262:48558487-48558533	10q11.22c	PREDICTED: Homo sapiens similar to ARF GTPase-activating protein, transcript variant 1 (FLJ00312), mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	XM_934419.1	ILMN_30832	LOC339799	XM_934419.2	XM_934419.2		339799	113412861	XM_934419.2	LOC339799	XP_939512.1	ILMN_1678141	0000580139	A	332	GGACAGCTACGAGAGACGCAACGAGGTGCCGCACAATGAGTCAGAAGATG	2	+	58332399-58332424:58332500-58332523	2p16.1b	PREDICTED: Homo sapiens similar to eukaryotic translation initiation factor 3, subunit 5 epsilon, 47kDa, transcript variant 3 (LOC339799), mRNA.					
Homo sapiens	RefSeq	XR_037066.1	ILMN_339457	LOC727839	XR_037066.1	XR_037066.1		727839	169161137	XR_037066.1	LOC727839		ILMN_3281134	0002450750	M	1436	GAGATCTTATTGCTTGTCACTTGAACCCTGTAATTGTCACACATCTCTGG	1	-	106233978-106234027	1p21.1a	PREDICTED: Homo sapiens misc_RNA (LOC727839), miscRNA.					
Homo sapiens	RefSeq	XR_037066.1	ILMN_339457	LOC727839	XR_037066.1	XR_037066.1		727839	169161137	XR_037066.1	LOC727839		ILMN_3204630	0005220291	A	118	GCTTCCGATGGAGAAAAGGAACCTTCAGGTACTGTGAAAAACGATGCAAG	1	-	106235296-106235345	1p21.1a	PREDICTED: Homo sapiens misc_RNA (LOC727839), miscRNA.					
Homo sapiens	RefSeq	NM_032870.1	ILMN_16946	C6ORF111	NM_032870.1	NM_032870.1		25957	18699723	NM_032870.1	C6orf111	NP_116259.1	ILMN_2161357	0002120376	S	2287	CAGGCTCTGATTCTAGTGGAAGGAGCAGTTCTGAGTCTCCAGGAAGTAGC	6	-	99955250-99955299	6q16.3a	Homo sapiens chromosome 6 open reading frame 111 (C6orf111), mRNA.				DKFZp564B0769; FLJ90147; SRrp130; MGC104269; bA98I9.2; RP11-98I9.2; HSPC306; FLJ14752; FLJ14992; FLJ14853	DKFZp564B0769; FLJ90147; SRrp130; MGC104269; bA98I9.2; RP11-98I9.2; HSPC306; FLJ14752; FLJ14992; FLJ14853
Homo sapiens	RefSeq	NM_002467.3	ILMN_28130	MYC	NM_002467.3	NM_002467.3		4609	71774082	NM_002467.3	MYC	NP_002458.2	ILMN_1680618	0006270646	S	1697	CCTGCGTGACCAGATCCCGGAGTTGGAAAACAATGAAAAGGCCCCCAAGG	8	+	128822194-128822243	8q24.21b	Homo sapiens v-myc myelocytomatosis viral oncogene homolog (avian) (MYC), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2834731] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15994933] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 2834731] [evidence NAS]; The process of apoptosis in B cells [goid 1783] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9924025] [evidence TAS]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [pmid 9924025] [evidence TAS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10962037] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 15994933] [evidence IDA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IEA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active [goid 43279] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IEA]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2834731] [evidence NAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9924025] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10597290] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9308237] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9708738] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12706874] [evidence IPI]	c-Myc	c-Myc
Homo sapiens	RefSeq	NM_001136234.1	ILMN_370698	FAM48B1	NM_001136234.1	NM_001136234.1		100130302	210032508	NM_001136234.1	FAM48B1	NP_001129706.1	ILMN_3309589	0006280445	S	2459	TATCCAGCTCCAGACTCAGCAGTTGAGAGTCTTGCAGCAGCCGCAGCATA	X	+	24383336-24383385	Xp22.11a	Homo sapiens family with sequence similarity 48, member B1 (FAM48B1), mRNA.					
Homo sapiens	RefSeq	NM_001224.3	ILMN_16232	CASP2	NM_032983.2	NM_032983.2		835	39995060	NM_032983.2	CASP2	NP_116765.2	ILMN_1736568	0004570026	A	3294	CTTGACAATTCCCGGGCCCTTCAGTCCCTGAGCAGTCTACTTCTGTGTCT	7	+	142714292-142714341	7q34f	Homo sapiens caspase 2, apoptosis-related cysteine peptidase (CASP2), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11156409] [evidence NAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8087842] [evidence TAS]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [pmid 8087842] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 11156409] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 11156409] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 11076957] [evidence ISS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11156409] [evidence IPI]	NEDD2; ICH1; ICH-1L/1S; CASP-2; ICH-1L	NEDD2; ICH1; ICH-1L/1S; CASP-2; ICH-1L
Homo sapiens	RefSeq	NM_001077241.1	ILMN_166414	SLC25A45	NM_001077241.1	NM_001077241.1		283130	116235465	NM_001077241.1	SLC25A45	NP_001070709.1	ILMN_2371397	0005090452	A	1652	TCTTAAGGAGCTCTGAGACTCCACTTCTGAGAGTCCCTGCGGCCTCCCAC	11	-	65143192-65143241	11q13.1c	Homo sapiens solute carrier family 25, member 45 (SLC25A45), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_182556.1	ILMN_166414	SLC25A45	NM_001077241.1	NM_001077241.1		283130	116235465	NM_001077241.1	SLC25A45	NP_001070709.1	ILMN_1810727	0002350544	S	1992	CCCTCACCCTTCCTTGACTTACCTCCCCACCTGAGGCTGACTTTGGGGTT	11	-	65142852-65142901	11q13.1c	Homo sapiens solute carrier family 25, member 45 (SLC25A45), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_005284.2	ILMN_9769	GPR6	NM_005284.3	NM_005284.3		2830	77797831	NM_005284.3	GPR6	NP_005275.1	ILMN_1796475	0003360239	S	1143	CCCAACAAGCCAGCCTTTGGTAAGCTCGGTGCCTGCTGACGAACTCTGAG	6	+	110301440-110301489	6q21g	Homo sapiens G protein-coupled receptor 6 (GPR6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7832990] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7832990] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]	Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	NM_181607.1	ILMN_24171	KRTAP19-1	NM_181607.1	NM_181607.1		337882	31791029	NM_181607.1	KRTAP19-1	NP_853638.1	ILMN_1801138	0002710008	S	204	TGGAGGCTATGGATATGGCTGCTGCCGCCCATCGTACAATGGAGGATACG	21	-	31852383-31852432	21q22.11a	Homo sapiens keratin associated protein 19-1 (KRTAP19-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP19.1	KAP19.1
Homo sapiens	RefSeq	NM_030662.2	ILMN_24956	MAP2K2	NM_030662.2	NM_030662.2		5605	21614527	NM_030662.2	MAP2K2	NP_109587.1	ILMN_1657968	0004290736	S	1369	CCGAGGTGGAAGAAGTGGATTTTGCCGGCTGGTTGTGTAAAACCCTGCGG	19	-	4041634-4041683	19p13.3e	Homo sapiens mitogen-activated protein kinase kinase 2 (MAP2K2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8388392] [evidence NAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence NAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11909642] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKMK2; MAPKK2; MEK2; MKK2	PRKMK2; MAPKK2; MEK2; MKK2
Homo sapiens	RefSeq	NR_002590.1	ILMN_12368	SNORA41	NR_002590.1	NR_002590.1		619569	77993295	NR_002590.1	SNORA41		ILMN_3241798	0003450327	S	11	ACTGGTCTGCAGCTGTTCTTATGGTAGCAGTTGTGGCATTCCTCTGTGGG	2	+	206735207-206735256	2q33.3b	Homo sapiens small nucleolar RNA, H/ACA box 41 (SNORA41), small nucleolar RNA.				ACA41	ACA41
Homo sapiens	RefSeq	NM_173481.2	ILMN_162370	C19ORF21	NM_173481.2	NM_173481.2		126353	34222226	NM_173481.2	C19orf21	NP_775752.1	ILMN_1683905	0005670341	S	2758	CACCTGGGAGAAAAGTGACCCAGTTTAGGAGCTGGAGGGGGGTCTTTGTC	19	+	715225-715274	19p13.3i	Homo sapiens chromosome 19 open reading frame 21 (C19orf21), mRNA.				DKFZp686H18209	DKFZp686H18209
Homo sapiens	RefSeq	NM_018179.3	ILMN_24966	ATF7IP	NM_018179.3	NM_018179.3		55729	38261961	NM_018179.3	ATF7IP	NP_060649.3	ILMN_1716435	0002570682	S	4554	GCAATGGCCCCCTCCCTTTCCTAATCTGGCTTTTACATTTATTTTGTGCC	12	+	14542706-14542755	12p13.1a	Homo sapiens activating transcription factor 7 interacting protein (ATF7IP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12665582] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 12665582] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 12665582] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcriptional preinitiation complex assembly [goid 45898] [pmid 12665582] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12665582] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	FLJ10139; FLJ10688; MCAF; p621	FLJ10139; FLJ10688; MCAF; p621
Homo sapiens	RefSeq	XM_001717628.1	ILMN_336567	LOC100133315	XM_001717628.1	XM_001717628.1		100133315	169203017	XM_001717628.1	LOC100133315	XP_001717680.1	ILMN_3201034	0005220722	A	543	AGGAGAGTTATGGGATCGACTTCGCCTGACCTGCTCCCGACCCTTCACGC				11q13.4a	PREDICTED: Homo sapiens similar to hCG1640299 (LOC100133315), mRNA.					
Homo sapiens	RefSeq	XM_001717628.1	ILMN_336567	LOC100133315	XM_001717628.1	XM_001717628.1		100133315	169203017	XM_001717628.1	LOC100133315	XP_001717680.1	ILMN_3277511	0000770435	M	462	GTCTCTAACTGATTCAAAGCAGGGGAAGAACCGCTCCGGGGTCCGCATGT				11q13.4a	PREDICTED: Homo sapiens similar to hCG1640299 (LOC100133315), mRNA.					
Homo sapiens	RefSeq	XR_037592.1	ILMN_349766	LOC100132541	XR_037592.1	XR_037592.1		100132541	169177167	XR_037592.1	LOC100132541		ILMN_3247297	0005810369	S	411	AATTTCCAGAACTATGGTCCCTGTGCTCCAGTTCGTCAGGCGGGCGCGGC	9	+	42483531-42483580	9p11.2d	PREDICTED: Homo sapiens misc_RNA (LOC100132541), miscRNA.					
Homo sapiens	RefSeq	NM_207295.1	ILMN_10733	MBNL1	NM_207295.1	NM_207295.1		4154	46411169	NM_207295.1	MBNL1	NP_997178.1	ILMN_2313158	0000160253	A	4121	GAGGGTTGATTATGCTGCAATTTAGCATGTTGGAACGTCTAGGGAGAAGG	3	+	152182542-152182591	3q25.1c-q25.2a	Homo sapiens muscleblind-like (Drosophila) (MBNL1), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10970838] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10970838] [evidence IDA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence ISS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence ISS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence ISS]	Interacting selectively with double-stranded RNA [goid 3725] [pmid 10970838] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EXP; EXP42; KIAA0428; DKFZp686P06174; EXP35; MBNL; EXP40	EXP42; KIAA0428; MBNL; EXP40; EXP; DKFZp686P06174; EXP35
Homo sapiens	RefSeq	XM_932553.1	ILMN_41025	LOC644978	XM_932553.1	XM_932553.1		644978	89040473	XM_932553.1	LOC644978	XP_937646.1	ILMN_1680029	0006280192	S	248	ACCTCAGCTCTCCCTCCGCCCAGTCACCTGAGCCGGTGCCGCAGGCCGGG	16	-	65472137-65472186	16q22.1a	PREDICTED: Homo sapiens hypothetical LOC644978 (LOC644978), mRNA.					
Homo sapiens	RefSeq	NM_138980.1	ILMN_18894	MAPK10	NM_138982.1	NM_138982.1		5602	20986509	NM_138982.1	MAPK10	NP_620448.1	ILMN_1748281	0001440687	A	1833	CCCATCCAGCATGTGTGTGTCTCTATCTTGCATCTACCTGCTCCTTGGCC	4	-	87156984-87157033	4q21.3a-q21.3c	Homo sapiens mitogen-activated protein kinase 10 (MAPK10), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8654373] [evidence TAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 8654373] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation and activation of members of the JUN family, a gene family that encodes nuclear transcription factors [goid 4705] [pmid 8654373] [evidence ISS]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 7826642] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKM10; JNK3; FLJ33785; JNK3A; p54bSAPK; FLJ12099; p493F12; MGC50974	PRKM10; JNK3; FLJ33785; JNK3A; p54bSAPK; FLJ12099; p493F12; MGC50974
Homo sapiens	RefSeq	NM_030883.3	ILMN_13323	OR2H1	NM_030883.3	NM_030883.3		26716	34222273	NM_030883.3	OR2H1	NP_112145.1	ILMN_1691962	0001740725	S	2598	ACCTAATCACTGCCCAAAGGCCCCATGTTCTAATGCCATCATCTTGGTGG	6	+	29431701-29431750	6p22.1a	Homo sapiens olfactory receptor, family 2, subfamily H, member 1 (OR2H1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OLFR42A-9004-14; OR2H8; HS6M1-16; OR6-2; dJ994E9.4; 6M1-16; OR2H6	OLFR42A-9004-14; OR2H8; HS6M1-16; OR6-2; dJ994E9.4; 6M1-16; OR2H6
Homo sapiens	RefSeq	NM_001013407.1	ILMN_180246	PRAMEF5	NM_001013407.1	NM_001013407.1		343068	61696141	NM_001013407.1	PRAMEF5	NP_001013425.1	ILMN_2094648	0005290291	S	1773	GAGTGGAGGCTTGAGAATACTTGAGGGAGTTACTCTTGGATGCATGGTTG	1	+	13241562-13241611	1p36.21d	Homo sapiens PRAME family member 5 (PRAMEF5), mRNA.					
Homo sapiens	RefSeq	XM_938359.1	ILMN_180246	PRAMEF5	NM_001013407.1	NM_001013407.1		343068	61696141	NM_001013407.1	PRAMEF5	NP_001013425.1	ILMN_1718135	0000940176	A	821	CACATGGATGTCTCTCGCTACGTTTCCCCAGAGCAGAAGAAGGAGATTGT	1	+	13238864-13238913	1p36.21d	Homo sapiens PRAME family member 5 (PRAMEF5), mRNA.					
Homo sapiens	RefSeq	XR_036959.1	ILMN_351876	LOC441420	XR_036959.1	XR_036959.1		441420	169177317	XR_036959.1	LOC441420		ILMN_3248688	0001510288	S	2040	GTGTCTGATGCTAGTCCATACACTTTCCAAGTCCCACAAAACTCTCACAA	9	+	45267945-45267994	9p11.2b	PREDICTED: Homo sapiens misc_RNA (LOC441420), miscRNA.					
Homo sapiens	RefSeq	NM_033512.2	ILMN_20655	TSPYL5	NM_033512.2	NM_033512.2		85453	49410494	NM_033512.2	TSPYL5	NP_277047.2	ILMN_1737972	0000770132	S	4077	GAGGGATGCTTCCTTTCCCTTGCATCTACAAAACAAGAGAGAGACTGTTC	8	-	98355226-98355275	8q22.1e	Homo sapiens TSPY-like 5 (TSPYL5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		KIAA1750	KIAA1750
Homo sapiens	RefSeq	XR_042337.1	ILMN_339471	LOC728093	XR_042337.1	XR_042337.1		728093	169167485	XR_042337.1	LOC728093		ILMN_3231554	0003390097	I	3344	GGTCAAATGGGGTCACACAGAATACTAAGAGCTGTTCACCCAGACCTCAC	5	-	98885571-98885620	5q21.1b	PREDICTED: Homo sapiens misc_RNA (LOC728093), miscRNA.					
Homo sapiens	RefSeq	Hs.21380	ILMN_19670	LONRF2	NM_198461.3	NM_198461.3		164832	148528974	NM_198461.3	LONRF2	NP_940863.3	ILMN_1820389	0005720446	S	12826	TAGAGAGGGGCGGGCCTGGACCTTCAAGCACCCCTTGGTGTGTTTAGGAG	2	-	100890789-100890838	2q11.2d	Homo sapiens LON peptidase N-terminal domain and ring finger 2 (LONRF2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126711; RNF192; FLJ45273; MGC126713	
Homo sapiens	RefSeq	NM_198461.1	ILMN_19670	LONRF2	NM_198461.3	NM_198461.3		164832	148528974	NM_198461.3	LONRF2	NP_940863.3	ILMN_1751016	0006280379	S	3428	TCAGTGCAGGAGCCCAAACTAGTCCTTACCCAAGAAGTAGTAGCCTCTGG	2	-	100900187-100900236	2q11.2d	Homo sapiens LON peptidase N-terminal domain and ring finger 2 (LONRF2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126711; RNF192; FLJ45273; MGC126713	MGC126711; RNF192; FLJ45273; MGC126713
Homo sapiens	RefSeq	NM_198566.1	ILMN_179972	C5ORF34	NM_198566.1	NM_198566.1		375444	38348407	NM_198566.1	C5orf34	NP_940968.1	ILMN_2198575	0001570221	S	2309	AGCCAAGATATTGTACGTATTACCCCGGCACAATGATTGTGAAAGAACTG	5	-	43522648-43522697	5p12c-p12b	Homo sapiens chromosome 5 open reading frame 34 (C5orf34), mRNA.				MGC46448; FLJ32363	MGC46448; FLJ32363
Homo sapiens	RefSeq	XM_001715892.1	ILMN_334192	LOC100131973	XM_001715892.1	XM_001715892.1		100131973	169171635	XM_001715892.1	LOC100131973	XP_001715944.1	ILMN_3274646	0004200609	M	173	TTTCCGAGAAAGCGTACTCCGCACGGTGCACCTCTCCGTCTGCAGGCGCT				7q11.21d	PREDICTED: Homo sapiens hypothetical protein LOC100131973 (LOC100131973), mRNA.					
Homo sapiens	RefSeq	NM_014337.2	ILMN_29079	PPIL2	NM_014337.3	NM_014337.3		23759	148271089	NM_014337.3	PPIL2	NP_055152.1	ILMN_1729690	0007200382	A	1632	TCCAAGAAGAAGCCCAGTCGGGGTTTTGGGGACTTCAGCTCCTGGTAGCA	22	+	20379732-20379779:20379780-20379781	22q11.21f	Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 2 (PPIL2), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8660300] [evidence TAS]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 15946952] [evidence EXP]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 11435423] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11435423] [evidence IDA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MGC787; CYC4; MGC33174; CYP60; hCyP-60; FLJ39930	MGC787; CYC4; MGC33174; CYP60; hCyP-60; FLJ39930
Homo sapiens	RefSeq	NM_014337.2	ILMN_29079	PPIL2	NM_014337.3	NM_014337.3		23759	148271089	NM_014337.3	PPIL2	NP_055152.1	ILMN_1802872	0003360437	I	2535	CTCCTGCTGTGAGAACAAGTGGATGTCCCTCTCCCCGCCCTCCTGCTGAA	22	+	20380635-20380684	22q11.21f	Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 2 (PPIL2), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8660300] [evidence TAS]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 15946952] [evidence EXP]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 11435423] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11435423] [evidence IDA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MGC787; CYC4; MGC33174; CYP60; hCyP-60; FLJ39930	MGC787; CYC4; MGC33174; CYP60; hCyP-60; FLJ39930
Homo sapiens	RefSeq	NM_148175.1	ILMN_29079	PPIL2	NM_014337.3	NM_014337.3		23759	148271089	NM_014337.3	PPIL2	NP_055152.1	ILMN_1675273	0002750521	I	3021	ATGCTGGGTGGCGCCTCATCTGCATCTCTGCCTCACCCCATCCACTGCCA	22	+	20381121-20381170	22q11.21f	Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 2 (PPIL2), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8660300] [evidence TAS]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 15946952] [evidence EXP]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 11435423] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11435423] [evidence IDA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MGC787; CYC4; MGC33174; CYP60; hCyP-60; FLJ39930	MGC787; CYC4; MGC33174; CYP60; hCyP-60; FLJ39930
Homo sapiens	RefSeq	XM_929985.1	ILMN_33330	LOC644889	XM_929985.1	XM_929985.1		644889	89033795	XM_929985.1	LOC644889	XP_935078.1	ILMN_1696186	0000290563	S	42	CATAGTATATATAAAAACCTGGCTTCTTTCCGCGCCGATAGCGCTCACGC	11	-	16953140-16953189		PREDICTED: Homo sapiens similar to large subunit ribosomal protein L36a (LOC644889), mRNA.					
Homo sapiens	RefSeq	XM_929245.1	ILMN_35739	LOC646307	XM_929245.1	XM_929245.1		646307	88942862	XM_929245.1	LOC646307	XP_934338.1	ILMN_1651582	0005420543	S	2	TGAGGAGACAAGCAGATAAACGGCAGAACGACATGACAAAGAGAGAAGAG	1	-	70945053-70945102		PREDICTED: Homo sapiens hypothetical protein LOC646307 (LOC646307), mRNA.					
Homo sapiens	RefSeq	NM_032442.2	ILMN_180158	NEURL4	NM_032442.2	NM_032442.2		84461	53829369	NM_032442.2	NEURL4	NP_115818.2	ILMN_2407811	0001990292	A	4821	AGGAGCATGTAGGCAGGCTCTCAGATGTAGGTGGCAAGTGGCACAGCTCC	17	-	7219267-7219316	17p13.1d	Homo sapiens neuralized homolog 4 (Drosophila) (NEURL4), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	XM_928360.1	ILMN_46085	LOC645322	XM_928360.1	XM_928360.1		645322	89057912	XM_928360.1	LOC645322	XP_933453.1	ILMN_1814541	0005310228	S	617	TAATCGTATCCTAACTTGGCACAGAACCTCACCCTTCCTGGGAACACAGG	20	-	55967450-55967499		PREDICTED: Homo sapiens hypothetical protein LOC645322 (LOC645322), mRNA.					
Homo sapiens	RefSeq	NM_138391.3	ILMN_174778	TMEM183A	NM_138391.4	NM_138391.4		92703	115529436	NM_138391.4	TMEM183A	NP_612400.3	ILMN_1752589	0000940754	S	1399	GCATTTAAAAGGAGTGGCCCTGTTTTCTGTGTTAAAACCCCATTTGGTGC	1	+	201259001-201259050	1q32.1d	Homo sapiens transmembrane protein 183A (TMEM183A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C1orf37	
Homo sapiens	RefSeq	NM_138391.4	ILMN_174778	TMEM183A	NM_138391.4	NM_138391.4		92703	115529436	NM_138391.4	TMEM183A	NP_612400.3	ILMN_3251388	0006840685	S	1921	GTGACTGTACCTATAACACCAGTAAATGCAGAGCCAAGATTCTGACCCAG	1	+	202976964-202976991:202977771-202977792	1q32.1d	Homo sapiens transmembrane protein 183A (TMEM183A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C1orf37	C1orf37
Homo sapiens	RefSeq	NM_021935.2	ILMN_16792	PROK2	NM_021935.2	NM_021935.2		60675	24475653	NM_021935.2	PROK2	NP_068754.1	ILMN_1775257	0001030463	S	1011	CTTCAGCTCTGCTGTTGGGCTGGTGTGTGGACAGAAGGAATGGAAAGCCA	3	-	71903840-71903889	3p13d	Homo sapiens prokineticin 2 (PROK2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12466223] [evidence TAS]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 12728244] [evidence TAS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 12604792] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12604792] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 12604792] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 11259612] [evidence NAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 12728244] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10580115] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 12604792] [evidence IDA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [pmid 12728244] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of smooth muscle contraction [goid 45987] [pmid 11259612] [evidence IDA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [pmid 12728244] [evidence TAS]	PK2; BV8; MIT1; KAL4	PK2; BV8; MIT1; KAL4
Homo sapiens	RefSeq	NM_001005202.1	ILMN_179804	OR8K3	NM_001005202.1	NM_001005202.1		219473	52353299	NM_001005202.1	OR8K3	NP_001005202.1	ILMN_1808262	0001260674	S	713	CTACCTGTGGAGCCCACCTGACAGTGGTCATAGTGTTCTATGGGACTTTG	11	+	55843071-55843120	11q11c	Homo sapiens olfactory receptor, family 8, subfamily K, member 3 (OR8K3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-181	OR11-181
Homo sapiens	RefSeq	NM_172242.1	ILMN_9635	SPAG6	NM_172242.1	NM_172242.1		9576	27262640	NM_172242.1	SPAG6	NP_758442.1	ILMN_2313378	0006770446	A	2121	TCCCCACCCTATCTAAAGTGTTCCTTACCTTTCATGGGCCCAGCGAGGGT	10	+	22705598-22705610:22705611-22705647	10p12.31a	Homo sapiens sperm associated antigen 6 (SPAG6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [pmid 10493827] [evidence TAS]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [pmid 10493827] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC26276; Repro-SA-1; DKFZp434I153; pf16	MGC26276; Repro-SA-1; DKFZp434I153; pf16
Homo sapiens	RefSeq	NM_001030013.1	ILMN_174870	NPS	NM_001030013.1	NM_001030013.1		594857	98986318	NM_001030013.1	NPS	NP_001025184.1	ILMN_3245281	0004900546	S	135	CTCATTCTGCTGAACAGCTGCCCAACCAGATTGGACAGGAGCAAAGAACT	10	+	129240738-129240787	10q26.2c	Homo sapiens neuropeptide S (NPS), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]			
Homo sapiens	RefSeq	NM_031204.1	ILMN_9106	CABP2	NM_031204.2	NM_031204.2		51475	110611179	NM_031204.2	CABP2	NP_112481.2	ILMN_1760288	0001440026	A	604	GAAGCTGGAGGCAGCATAAAGGACTCAAGGACCACAGCCTCTGCCCACCA	11	-	67286550-67286599	11q13.1f	Homo sapiens calcium binding protein 2 (CABP2), transcript variant 2, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10625670] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10625670] [evidence TAS]		
Homo sapiens	RefSeq	NM_031204.2	ILMN_9106	CABP2	NM_031204.2	NM_031204.2		51475	110611179	NM_031204.2	CABP2	NP_112481.2	ILMN_2398815	0001440008	A	609	TGGAGGCAGCATAAAGGACTCAAGGACCACAGCCTCTGCCCACCAGCATG	11	-	67286545-67286594	11q13.1f	Homo sapiens calcium binding protein 2 (CABP2), transcript variant 2, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10625670] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10625670] [evidence TAS]		
Homo sapiens	RefSeq	XM_942386.1	ILMN_162028	LOC730952	XR_015744.1	XR_015744.1		730952	113423757	XR_015744.1	LOC730952		ILMN_1670625	0007570746	S	103	CAGAAGATCCACAGGGCAGCTGTCAAGGGCGACGCCGCGGGGGTGGAGCG					PREDICTED: Homo sapiens misc_RNA (LOC730952), miscRNA.					
Homo sapiens	RefSeq	NM_206861.1	ILMN_24004	TACC2	NM_206861.1	NM_206861.1		10579	45827754	NM_206861.1	TACC2	NP_996743.1	ILMN_2363165	0005570286	A	3370	AGATGTGCGCAGGAGTACCTGTCCCGGGTGAAGAAGGAGGAGCAGAGGTA	10	+	123970168-123970217	10q26.13a-q26.13b	Homo sapiens transforming, acidic coiled-coil containing protein 2 (TACC2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15207008] [evidence IDA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [pmid 15207008] [evidence IDA]	AZU-1; ECTACC	AZU-1; ECTACC
Homo sapiens	RefSeq	NM_007081.2	ILMN_29958	RABL2B	NM_001003789.1	NM_001003789.1		11158	51317348	NM_001003789.1	RABL2B	NP_001003789.1	ILMN_1810058	0002940048	A	1285	CACCTCGGGGACAATTCCTTGGGCTTCTCCTGAGGTAATGATTTACCCCC	22	-	51206775-51206824	22q13.33b	Homo sapiens RAB, member of RAS oncogene family-like 2B (RABL2B), transcript variant 1, mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10444334] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	XM_001128459.2	ILMN_173622	LOC728780	XM_001128459.2	XM_001128459.2		728780	169167686	XM_001128459.2	LOC728780	XP_001128459.2	ILMN_3234664	0004050762	I	1990	GCTGTGGCTCACACGGAGTATGGAACTATGGAAGGGGCTTGTAAGCTGTC	5	+	75001068-75001117	5q13.3c	PREDICTED: Homo sapiens hypothetical LOC728780 (LOC728780), mRNA.					
Homo sapiens	Unigene	Hs.577126	ILMN_129307	HS.577126	Hs.577126		Hs.577126		72069029	AB231740			ILMN_1914266	0007510504	S	270	GGGAATGATCACTCTTATTTGGATGGATTCTCGACTCCAGACCCCCATGT	11	-	56326665-56326714		Homo sapiens mRNA for hypothetical protein, complete cds, clone:Hsa11-digit22-05-16-R					
Homo sapiens	RefSeq	NR_024542.1	ILMN_371368	SNHG7	NR_024542.1	NR_024542.1		84973	215422347	NR_024542.1	SNHG7		ILMN_3233229	0004260202	I	509	TACAGATAGAGGCCTCACCCCCTCTGGGACCACTGGCACTCAGGGTGTTT	9	-	139619455-139619504		Homo sapiens small nucleolar RNA host gene 7 (non-protein coding) (SNHG7), transcript variant 2, non-coding RNA.					
Homo sapiens	RefSeq	NR_003697.1	ILMN_338067	C7ORF40	NR_003697.1	NR_003697.1		285958	154937378	NR_003697.1	C7orf40		ILMN_3248773	0006280725	S	498	CCTGTGCAGGGATGAGGCCTGCCTGTGTTAATACACCTAGTGAGGAGTGG	7	-	45022882-45022921:45023421-45023430	7p13c	Homo sapiens chromosome 7 open reading frame 40 (C7orf40), non-coding RNA.				FLJ38860	FLJ38860
Homo sapiens	RefSeq	XM_926621.1	ILMN_38184	LOC643261	XM_926621.1	XM_926621.1		643261	89058154	XM_926621.1	LOC643261	XP_931714.1	ILMN_1662418	0000050762	S	2	TGACAAAAGTCTGTCCCAGTGTGTTGACAGACTTTACTCTTCCTGTGAAT	21	-	21902570-21902619		PREDICTED: Homo sapiens similar to heat shock protein 90Bf (LOC643261), mRNA.					
Homo sapiens	RefSeq	NM_020120.2	ILMN_17794	UGCGL1	NM_020120.2	NM_020120.2		56886	71061444	NM_020120.2	UGCGL1	NP_064505.1	ILMN_1755462	0003170592	A	5830	GGTTGCCTTTGGCGCCCACACCAGTTCTGTCTTCATGTCGCTGCATCGTG	2	+	128664910-128664959	2q14.3e	Homo sapiens UDP-glucose ceramide glucosyltransferase-like 1 (UGCGL1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10694380] [evidence IDA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence ISS]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis [goid 51084] [pmid 10694380] [evidence TAS]	Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins [goid 3980] [pmid 10694380] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 10694380] [evidence IDA]	FLJ23796; HUGT1; FLJ23671	FLJ23796; HUGT1; FLJ23671
Homo sapiens	RefSeq	NM_020120.2	ILMN_17794	UGCGL1	NM_020120.2	NM_020120.2		56886	71061444	NM_020120.2	UGCGL1	NP_064505.1	ILMN_2360291	0007650725	A	6268	AGTTAGCCTAGGAAGCCTCCCAGTCATCCTGAAGGACCTTTTGACTTTGC	2	+	128665348-128665397	2q14.3e	Homo sapiens UDP-glucose ceramide glucosyltransferase-like 1 (UGCGL1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10694380] [evidence IDA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence ISS]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis [goid 51084] [pmid 10694380] [evidence TAS]	Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins [goid 3980] [pmid 10694380] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 10694380] [evidence IDA]	FLJ23796; HUGT1; FLJ23671	FLJ23796; HUGT1; FLJ23671
Homo sapiens	RefSeq	NM_031495.1	ILMN_25347	PCDHA2	NM_018905.2	NM_018905.2		56146	14165403	NM_018905.2	PCDHA2	NP_061728.1	ILMN_1672326	0006760136	A	2416	GGCCTTCAGCCCTAGCTTATCTCAAGGTCCAGACTCCGCAGAAGAGAAAC	5	+	140157043-140157092	5q31.3b	Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-ALPHA2	PCDH-ALPHA2
Homo sapiens	RefSeq	NM_199135.1	ILMN_308191	FOXD4L2	NM_001099279.1	NM_001099279.1		100036519	149944559	NM_001099279.1	FOXD4L2	NP_001092749.1	ILMN_1698938	0003850523	S	1863	TTTGTCCCCGACCGCGTGGAGCTACTGCCACCTGCTCCAGCGACCATCAA	9	+	42708590-42708639	9p11.2d	Homo sapiens forkhead box D4-like 2 (FOXD4L2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		MGC119257
Homo sapiens	RefSeq	XM_933246.1	ILMN_308191	FOXD4L2	NM_001099279.1	NM_001099279.1		100036519	149944559	NM_001099279.1	FOXD4L2	NP_001092749.1	ILMN_1705550	0000540561	A	2004	GGAGGACTGCGCCAACGGCTGCGCTCCCACCAAGGGCGCGGTGCTGGGCG	9	+	42708731-42708780	9p11.2d	Homo sapiens forkhead box D4-like 2 (FOXD4L2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_013319.1	ILMN_29292	UBIAD1	NM_013319.1	NM_013319.1		29914	7019550	NM_013319.1	UBIAD1	NP_037451.1	ILMN_1651872	0000110121	S	1421	GGAATGTGATTTGGCAGTCAGGGTACTAAGCATGGGTGGGAACTCCTGCC	1	+	11268869-11268918	1p36.22b	Homo sapiens UbiA prenyltransferase domain containing 1 (UBIAD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11314041] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11314041] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11314041] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]	RP4-796F18.1; TERE1	RP4-796F18.1; TERE1
Homo sapiens	RefSeq	XM_930423.1	ILMN_30566	LOC645058	XM_930423.1	XM_930423.1		645058	88942704	XM_930423.1	LOC645058	XP_935516.1	ILMN_1742887	0001980600	S	77	CACTTAATCTGGGTTGCCATGGGACCCTGTCAGATGAGCATGCTGGAGTG	1	+	62277178-62277227		PREDICTED: Homo sapiens similar to hepatitis B virus x-interacting protein (LOC645058), mRNA.					
Homo sapiens	RefSeq	NM_001335.2	ILMN_4961	CTSW	NM_001335.3	NM_001335.3		1521	119395730	NM_001335.3	CTSW	NP_001326.2	ILMN_1794364	0006580408	S	1216	CTCCTTGCCAGCCCCACCCCCAGGTTTTTGCCCATCCTCCCAATCTCAAT	11	+	65407708-65407757	11q13.1d	Homo sapiens cathepsin W (CTSW), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9823953] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	LYPN	LYPN
Homo sapiens	RefSeq	NM_024816.1	ILMN_24144	RABEP2	NM_024816.2	NM_024816.2		79874	117956402	NM_024816.2	RABEP2	NP_079092.2	ILMN_1693466	0005270301	I	207	AATGGAAACCATGAAGGCTGTGGCAGAGGTGAGCGAGAGCACGAAGGCCG	16	-	28935789-28935838	16p11.2e	Homo sapiens rabaptin, RAB GTPase binding effector protein 2 (RABEP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	FLJ23282; FRA	FLJ23282; FRA
Homo sapiens	RefSeq	XR_038314.1	ILMN_337875	LOC100131196	XR_038314.1	XR_038314.1		100131196	169179316	XR_038314.1	LOC100131196		ILMN_3202673	0003140709	A	342	GGCAGAGATGCTCCAGCTGCTGGTGAAGATGCATGAACAGGTCCAAGCAA				9q33.2b	PREDICTED: Homo sapiens misc_RNA (LOC100131196), miscRNA.					
Homo sapiens	RefSeq	NM_016307.3	ILMN_9456	PRRX2	NM_016307.3	NM_016307.3		51450	38505203	NM_016307.3	PRRX2	NP_057391.1	ILMN_1790338	0004150204	S	1196	TTGGAGGGGTTGGGCCGGAAGGTGGAAGAGCCTGCCAAGGACCTCATTTA	9	+	131524659-131524708	9q34.11d	Homo sapiens paired related homeobox 2 (PRRX2), mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9665387] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11063257] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PMX2; MGC19843; PRX2	PMX2; MGC19843; PRX2
Homo sapiens	RefSeq	NM_001098807.1	ILMN_308667	FAM75B	NM_001098807.1	NM_001098807.1		404770	149363675	NM_001098807.1	FAM75B	NP_001092277.1	ILMN_3237067	0004730372	S	650	CTCAGGCCTTGGCAGCTCAAACAGTCAAGTTTCTGCCTTCTCCTGGTGGC	9	-	83865548-83865597	9q21.32a	Homo sapiens family with sequence similarity 75, member B (FAM75B), mRNA.				C9orf36B; bA388B24.2	C9orf36B; bA388B24.2
Homo sapiens	RefSeq	XM_928563.1	ILMN_34069	LOC645545	XM_928563.1	XM_928563.1		645545	89041670	XM_928563.1	LOC645545	XP_933656.1	ILMN_1658072	0006960280	S	283	GTCAACCCCCGTAAGCGTCTAGATCATTTGCAGCAGGCTCGCGAACACTT	17	-	54093627-54093676	17q22d	PREDICTED: Homo sapiens similar to Immunoglobulin-binding protein 1 (CD79a-binding protein 1) (B cell signal transduction molecule alpha 4) (Alpha 4 protein) (NY-REN-16 antigen) (LOC645545), mRNA.					
Homo sapiens	Unigene	Hs.571502	ILMN_123683	HS.571502	Hs.571502		Hs.571502		50483990	CR603183			ILMN_1823231	0007100367	S	535	TGTTCCCGTGCATTTCGGAGCACCAAGCAAATACGAGCAGAGAGACCTGG	8	+	60195858-60195907		full-length cDNA clone CS0DM012YE14 of Fetal liver of Homo sapiens (human)					
Homo sapiens	RefSeq	NM_014847.2	ILMN_163836	UBAP2L	NM_014847.2	NM_014847.2		9898	40254860	NM_014847.2	UBAP2L	NP_055662.2	ILMN_1814789	0007610152	S	3575	TGCTATGGGCCCTGCACTTCCTTTGCTTCCTCCTGTTCACCCTGGTGGTG	1	+	152509657-152509706	1q21.3d	Homo sapiens ubiquitin associated protein 2-like (UBAP2L), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	NICE-4; KIAA0144; FLJ42300	NICE-4; KIAA0144; FLJ42300
Homo sapiens	RefSeq	NM_017813.2	ILMN_21923	IMPAD1	NM_017813.2	NM_017813.2		54928	46048163	NM_017813.2	IMPAD1	NP_060283.2	ILMN_1696311	0001110367	S	2049	TGCCATCTTGCTATTTTCATTTTCCCTGTGGAAGATGCATGGTTGCATCC	8	-	58038146-58038195	8q12.1b	Homo sapiens inositol monophosphatase domain containing 1 (IMPAD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: myo-inositol 1-phosphate + H2O = myo-inositol + phosphate [goid 8934] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	IMPA3; FLJ20421	IMPA3; FLJ20421
Homo sapiens	RefSeq	XM_942503.1	ILMN_138278	FAM69B	XM_942503.1	XM_942503.1		138311	89030712	XM_942503.1	FAM69B	XP_947596.1	ILMN_1669044	0000050121	I	888	CCCCGGCACTGCCTGTGTGAGGGGCTGGCAGCTTTCCAACTGCAGCAAGT				9q34.3e	PREDICTED: Homo sapiens family with sequence similarity 69, member B, transcript variant 2 (FAM69B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_001717928.1	ILMN_335226	LOC100130453	XM_001717928.1	XM_001717928.1		100130453	169212737	XM_001717928.1	LOC100130453	XP_001717980.1	ILMN_3176916	0000430707	A	165	AGCTCGGGAGGTGGCACGTGTGAGAACTCTCCATCCACAGGATGTGGCTC	18	+	75615965-75616014	18q23d	PREDICTED: Homo sapiens hypothetical protein LOC100130453 (LOC100130453), mRNA.					
Homo sapiens	Unigene	Hs.430335	ILMN_90839	HS.430335	Hs.430335		Hs.430335		7311329	AW606588			ILMN_1852387	0001050494	S	376	GGTCAGTGTGTTATGTAAATTGATGTCCACTACCTGAACATGTGATGCTT	X	-	73381375-73381424		QV0-HT0398-210100-096-c03 HT0398 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_001098796.1	ILMN_309311	TOX2	NM_001098796.1	NM_001098796.1		84969	149408140	NM_001098796.1	TOX2	NP_001092266.1	ILMN_3230215	0001580279	A	1877	GGCCGGCCCCCGGCATAGATGTGCACATCGGTTTTCCAGTGTGAACAAAA	20	+	42131128-42131177	20q13.12a	Homo sapiens TOX high mobility group box family member 2 (TOX2), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	dJ1108D11.2; MGC15880; C20orf100; GCX-1; dJ495O3.1	dJ1108D11.2; MGC15880; C20orf100; GCX-1; dJ495O3.1
Homo sapiens	RefSeq	NM_012398.1	ILMN_178370	PIP5K1C	NM_012398.1	NM_012398.1		23396	31317308	NM_012398.1	PIP5K1C	NP_036530.1	ILMN_1668514	0002570008	S	4860	TGGTGCGTGACAATCCAAAGCGCCGAGACGAGGGTGCTGTGTCCCTCAAA	19	-	3630470-3630519	19p13.3e	Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PIP5Kgamma; PIP5K-GAMMA; KIAA0589	PIP5Kgamma; LCCS3; PIP5K-GAMMA; KIAA0589
Homo sapiens	RefSeq	NM_003991.1	ILMN_22613	EDNRB	NM_000115.1	NM_000115.1		1910	4557546	NM_000115.1	EDNRB	NP_000106.1	ILMN_1751904	0002970164	A	1215	TTGCCTGGTCCTTGTCTTTGCCCTCTGCTGGCTTCCCCTTCACCTCAGCA	13	-	77372711-77372760	13q22.3b	Homo sapiens endothelin receptor type B (EDNRB), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8810293] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8810293] [evidence TAS]	The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 9556633] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 9556633] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure [goid 7497] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IEA]; The movement of a macrophage in response to an external stimulus [goid 48246] [pmid 12207323] [evidence IMP]	A G-protein coupled receptor that binds all endothelin molecules with approximately equal affinity [goid 1600] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HSCR; ABCDS; HSCR2; ETRB; ETB	ABCDS; HSCR2; ETRB; HSCR; ETB
Homo sapiens	RefSeq	NM_000115.1	ILMN_22613	EDNRB	NM_000115.1	NM_000115.1		1910	4557546	NM_000115.1	EDNRB	NP_000106.1	ILMN_1675100	0006900162	I	2971	GAGAAAACGGAAGAGAGAGGAAATGAGGTGGGGTTGGAGGAAACCCATGG	13	-	77368878-77368927	13q22.3b	Homo sapiens endothelin receptor type B (EDNRB), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8810293] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8810293] [evidence TAS]	The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 9556633] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 9556633] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure [goid 7497] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IEA]; The movement of a macrophage in response to an external stimulus [goid 48246] [pmid 12207323] [evidence IMP]	A G-protein coupled receptor that binds all endothelin molecules with approximately equal affinity [goid 1600] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HSCR; ABCDS; HSCR2; ETRB; ETB	ABCDS; HSCR2; ETRB; HSCR; ETB
Homo sapiens	RefSeq	XM_927493.1	ILMN_40193	LOC644327	XM_927493.1	XM_927493.1		644327	89027715	XM_927493.1	LOC644327	XP_932586.1	ILMN_1790045	0004040164	S	489	GCAGACCGTTCCCCAGGCCCAGAGCGCACATCAAACGCCTCTAATTCTCT	8	-	739413-739444:741954-741971		PREDICTED: Homo sapiens similar to W03G1.5 (LOC644327), mRNA.					
Homo sapiens	RefSeq	NM_001078645.1	ILMN_175130	CDC16	NM_001078645.1	NM_001078645.1		8881	118402577	NM_001078645.1	CDC16	NP_001072113.1	ILMN_2256765	0005360619	I	2118	CCTCTCCATGGCTTAAGAATGTCCCACTTCCTAACGTGACTCCAAACTGC	13	+	114056077-114056126	13q34d	Homo sapiens cell division cycle 16 homolog (S. cerevisiae) (CDC16), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 7736578] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [pmid 7736578] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 7736578] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7736578] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	APC6	APC6
Homo sapiens	RefSeq	NM_001078645.1	ILMN_175130	CDC16	NM_001078645.1	NM_001078645.1		8881	118402577	NM_001078645.1	CDC16	NP_001072113.1	ILMN_2339796	0003170561	A	2179	TAGGAACAGAGACCCGCCTTAAGAGACTGGATCGCACACCTTTGCAACAG	13	+	114056138-114056187	13q34d	Homo sapiens cell division cycle 16 homolog (S. cerevisiae) (CDC16), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 7736578] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [pmid 7736578] [evidence IDA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 7736578] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7736578] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	APC6	APC6
Homo sapiens	Unigene	Hs.22566	ILMN_71771	HS.22566	Hs.22566		Hs.22566		51646574	CR738732			ILMN_1843403	0002850088	S	177	GGGGTCTTGAATTAGGGTTTTCATCTCTCTGGGTTCACCTCGCACGCTGC	1	+	227872017-227872066		CR738732 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGp971E16101 ; IMAGE:2384145 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001034077.4	ILMN_14585	HIST2H4B	NM_001034077.4	NM_001034077.4		554313	106775680	NM_001034077.4	HIST2H4B	NP_001029249.1	ILMN_3238233	0004610471	S	209	GTGTTCCTGGAGAATGTGATTCGGGACGCAGTCACCTACACCGAGCACGC	1	-	149832467-149832516	1q21.2a	Homo sapiens histone cluster 2, H4b (HIST2H4B), mRNA.				H4/o	H4/o
Homo sapiens	RefSeq	NM_024665.3	ILMN_10118	TBL1XR1	NM_024665.3	NM_024665.3		79718	51477719	NM_024665.3	TBL1XR1	NP_078941.2	ILMN_1798657	0000540082	S	5632	TCCCCCTTCTCCTGAATCAGCAGGGATGGAAGGAGGGTAGGGAAGTTATG	3	-	178222096-178222145	3q26.32a	Homo sapiens transducin (beta)-like 1X-linked receptor 1 (TBL1XR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		DC42; FLJ12894; TBLR1; IRA1; C21	DC42; FLJ12894; TBLR1; IRA1; C21
Homo sapiens	RefSeq	NR_001548.1	ILMN_9416	TTTY11	NR_001548.1	NR_001548.1		83866	32563550	NR_001548.1	TTTY11		ILMN_2163540	0001500037	S	368	CTACAGGAGATGGTGGGGAAAGTCAATCTGAAAAAGGCGACTAAAGCGGA	Y	-	8717047-8717096	Yp11.2e	Homo sapiens testis-specific transcript, Y-linked 11 (TTTY11) on chromosome Y.				TTY11	TTY11
Homo sapiens	RefSeq	NR_001548.1	ILMN_9416	TTTY11	NR_001548.1	NR_001548.1		83866	32563550	NR_001548.1	TTTY11		ILMN_2163538	0000050451	S	566	GTGACAAAGTGGCAGCTTGGTGATTATCCACAGAAGGGGCATGTGACCCC	Y	-	8712053-8712102	Yp11.2e	Homo sapiens testis-specific transcript, Y-linked 11 (TTTY11) on chromosome Y.				TTY11	TTY11
Homo sapiens	RefSeq	NM_004988.3	ILMN_177427	MAGEA1	NM_004988.4	NM_004988.4		4100	148276976	NM_004988.4	MAGEA1	NP_004979.3	ILMN_1722830	0006980088	S	1193	GTGCACCTTCCAGGGCCGCGTCCAGCAGCTTCCCCTGCCTCGTGTGACAT	X	-	152481988-152482037	Xq28f	Homo sapiens melanoma antigen family A, 1 (directs expression of antigen MZ2-E) (MAGEA1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1840703] [evidence TAS]			MGC9326; MAGE1	MGC9326; MAGE1
Homo sapiens	RefSeq	NM_174933.2	ILMN_951	PHYHD1	NM_174933.2	NM_174933.2		254295	34222242	NM_174933.2	PHYHD1	NP_777593.1	ILMN_2183692	0002970114	S	1239	ACAGCTGAACTGCCCTTTCCCCAACTGTACACCTAAAGGCTCTCGCAGGG	9	+	130743778-130743827	9q34.11c	Homo sapiens phytanoyl-CoA dioxygenase domain containing 1 (PHYHD1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC16638	MGC16638
Homo sapiens	RefSeq	NM_012239.4	ILMN_25083	SIRT3	NM_001017524.1	NM_001017524.1		23410	63054861	NM_001017524.1	SIRT3	NP_001017524.1	ILMN_1733985	0006370170	A	2440	CTTCCGCCTCCCGGGTTTAAGCGATTCTCCTGGGTAGCTGGGATTACAGG	11	-	205295-205344	11p15.5d	Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 3 (S. cerevisiae) (SIRT3), transcript variant 2, mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 10381378] [evidence TAS]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [pmid 10381378] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	SIR2L3	SIR2L3
Homo sapiens	RefSeq	NM_001012977.1	ILMN_809	LOC340529	NM_001012977.1	NM_001012977.1		340529	61175236	NM_001012977.1	LOC340529	NP_001012995.1	ILMN_1745409	0003170041	S	1785	GTGTGTCTTGGCCAGCTTGGCGGGCTACAAAGGGTGTTTCGCTGTCCTCG	X	-	72214242-72214291	Xq13.2a	Homo sapiens similar to poly(A)binding protein, cytoplasmic 1 (LOC340529), mRNA.				RP11-493K23.3; RP11-493K23.2	RP11-493K23.3; RP11-493K23.2
Homo sapiens	RefSeq	XM_941135.1	ILMN_45773	LOC651872	XM_941135.2	XM_941135.2		651872	113418225	XM_941135.2	LOC651872	XP_946228.1	ILMN_1698007	0001260138	S	135	GTTTTCCTCCCTGTATTCCTCACAATAGCTTTCGTCATTGGACTTGCAGG					PREDICTED: Homo sapiens similar to C-C chemokine receptor type 11 (C-C CKR-11) (CC-CKR-11) (CCR-11) (CC chemokine receptor-like 1) (CCRL1) (CCX CKR) (LOC651872), mRNA.					
Homo sapiens	RefSeq	NM_017629.2	ILMN_22990	EIF2C4	NM_017629.2	NM_017629.2		192670	29029592	NM_017629.2	EIF2C4	NP_060099.2	ILMN_1706304	0005560438	S	4368	GGCCTGGAGCCACACTCTATATGGCTGAGGAAGGAGCTAGGGAAAGAGAT	1	+	36093385-36093434	1p34.3e	Homo sapiens eukaryotic translation initiation factor 2C, 4 (EIF2C4), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	AGO4	AGO4
Homo sapiens	RefSeq	NM_001031685.1	ILMN_9205	TP53BP2	NM_001031685.2	NM_001031685.2		7159	112799848	NM_001031685.2	TP53BP2	NP_001026855.2	ILMN_1779706	0000150095	A	4085	AGAAAGGACCAGTGCCGTCACATCGCTGTCTCTGATTGTCCCCGGCACCA	1	-	223968117-223968166	1q41e-q42.11a	Homo sapiens tumor protein p53 binding protein, 2 (TP53BP2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15782125] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11684014] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9748285] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 14729977] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8668206] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14729977] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11684014] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12694406] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters [goid 51059] [pmid 10498867] [evidence IPI]	53BP2; BBP; p53BP2; ASPP2; PPP1R13A	53BP2; ASPP2; PPP1R13A
Homo sapiens	RefSeq	NM_024844.2	ILMN_183921	NUP85	NM_024844.3	NM_024844.3		79902	82880675	NM_024844.3	NUP85	NP_079120.1	ILMN_1669635	0001430402	S	1949	GATGACGTCTCGGATTGCCCCTCGGTCTTTCTGGATGACTCTGCTGACAG	17	+	70742400-70742449	17q25.1c	Homo sapiens nucleoporin 85kDa (NUP85), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		Nup75; FLJ12549	FLJ12549; Nup75
Homo sapiens	RefSeq	XM_932199.1	ILMN_42543	LOC644468	XM_932199.1	XM_932199.1		644468	89028281	XM_932199.1	LOC644468	XP_937292.1	ILMN_1679113	0006900187	S	83	AGCACTGTCGAGGTCACAGACTGCAGACCTCCTTGTATCTTCAAATGGAG	8	+	112547616-112547659:112547660-112547665		PREDICTED: Homo sapiens hypothetical protein LOC644468 (LOC644468), mRNA.					
Homo sapiens	Unigene	Hs.545251	ILMN_108495	HS.545251	Hs.545251		Hs.545251		13713839	BG192152			ILMN_1861972	0004480189	S	5	GAACTACAGCGAGAAAAGGGAGACAGAAGAGGATGGACGGTTGCGTGTGC	8	+	122405441-122405478:122405480-122405484:122405486-122405492		RST11259 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_206885.1	ILMN_24117	SLC26A5	NM_206883.1	NM_206883.1		375611	45827799	NM_206883.1	SLC26A5	NP_996766.1	ILMN_1796154	0003610246	A	1093	TGCCGGCGCCTATTCCTTTAGAGTTCTTTGCGGTCGTAATGGGAACTGGC	7	-	103038443-103038461:103048298-103048328	7q22.1g	Homo sapiens solute carrier family 26, member 5 (prestin) (SLC26A5), transcript variant b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 12719379] [evidence IMP]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	MGC118888; DFNB61; MGC118886; MGC118887; MGC118889; PRES	MGC118888; DFNB61; MGC118886; MGC118887; MGC118889; PRES
Homo sapiens	RefSeq	NM_003286.2	ILMN_183208	TOP1	NM_003286.2	NM_003286.2		7150	19913404	NM_003286.2	TOP1	NP_003277.1	ILMN_2192316	0001570537	S	3243	AAGATCGTGTAGATTGGGGTTGGGGAGGGATGAAGGGCGAGTGAATCTAA	20	+	39186050-39186099	20q12b-q12c	Homo sapiens topoisomerase (DNA) I (TOP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9049244] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9049244] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [pmid 9049244] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9049244] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; Cell death resulting from activation of endogenous cellular processes [goid 12501] [pmid 17172417] [evidence NAS]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [pmid 17481653] [evidence NAS]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 16127745] [evidence IEP]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 9049244] [evidence IDA]; Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [pmid 17355975] [evidence IMP]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10352183] [evidence IPI]	TOPI	TOPI
Homo sapiens	RefSeq	NM_207037.1	ILMN_182697	TCF12	NM_207037.1	NM_207037.1		6938	46370081	NM_207037.1	TCF12	NP_996920.1	ILMN_2314007	0000050086	A	4160	CAGAAGTTGTTGCTTATGATGTGTGAGTGAACATATGCCACTGCCTGGCC	15	+	55367380-55367429	15q21.3d	Homo sapiens transcription factor 12 (TCF12), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8163514] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1312219] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 1312219] [evidence TAS]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 8163514] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	HEB; HsT17266; HTF4	HEB; HsT17266; HTF4
Homo sapiens	RefSeq	NM_175738.3	ILMN_520	RAB37	NM_175738.3	NM_175738.3		326624	54859694	NM_175738.3	RAB37	NP_783865.1	ILMN_1737364	0001030445	I	574	GTTCAGTTCGATCAGGGCAAGTTCATCCCCGGCTCCTTCTCGGCCACTGT	17	+	70237035-70237084	17q25.1b	Homo sapiens RAB37, member RAS oncogene family (RAB37), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ32507; FLJ30284	FLJ32507; FLJ30284
Homo sapiens	RefSeq	NM_175738.3	ILMN_520	RAB37	NM_175738.3	NM_175738.3		326624	54859694	NM_175738.3	RAB37	NP_783865.1	ILMN_2255579	0001500600	I	1532	CTCTGAGCAGTCAGCGGCTCCAGTTTGGGCCCGATAAGGAAGTTCTCCGT	17	+	70254871-70254920	17q25.1b	Homo sapiens RAB37, member RAS oncogene family (RAB37), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ32507; FLJ30284	FLJ32507; FLJ30284
Homo sapiens	RefSeq	XM_001716920.1	ILMN_340084	LOC100131851	XM_001716920.1	XM_001716920.1		100131851	169171387	XM_001716920.1	LOC100131851	XP_001716972.1	ILMN_3281855	0006560095	M	311	GGGCTGACGCTTTGACAGCTGGAAAGAGCGCGGAGCCAGCGCCTGGTGGG				7p14.1d-p14.1c	PREDICTED: Homo sapiens hypothetical LOC100131851 (LOC100131851), mRNA.					
Homo sapiens	RefSeq	NM_175630.1	ILMN_26218	DNMT3A	NM_175630.1	NM_175630.1		1788	28559070	NM_175630.1	DNMT3A	NP_783329.1	ILMN_1676128	0001300592	I	1401	AGCCCAGGCCTCTTCATCTGGGGACTTTTTGGCCTAACCCTGGAAGCCTG	2	-	25504645-25504694	2p23.3c	Homo sapiens DNA (cytosine-5-)-methyltransferase 3 alpha (DNMT3A), transcript variant 4, mRNA.	A dispersed and relatively uncompacted form of chromatin [goid 791] [pmid 12138111] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12138111] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12138111] [evidence ISS]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 12138111] [evidence ISS]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 12138111] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10433969] [evidence TAS]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 12138111] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16682412] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DNMT3A2; M.HsaIIIA	DNMT3A2; M.HsaIIIA
Homo sapiens	RefSeq	XM_938171.1	ILMN_38886	PIM3	XM_938171.2	XM_938171.2		415116	113429645	XM_938171.2	PIM3	XP_943264.2	ILMN_1672034	0000050538	I	2180	TTGAGCGGCTCTGCCTCTGTGGTGGGCGTGCTAAGCCCTGTGTCCCCTTA				22q13.33a	PREDICTED: Homo sapiens pim-3 oncogene (PIM3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_001001852.2	ILMN_38886	PIM3	XM_938171.2	XM_938171.2		415116	113429645	XM_938171.2	PIM3	XP_943264.2	ILMN_1707748	0002190452	A	3221	GCCTGGCGTCTGTCCTGGCCCCGCCTGTCAGAAGATGAACATGTATAGTG				22q13.33a	PREDICTED: Homo sapiens pim-3 oncogene (PIM3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		pim-3
Homo sapiens	RefSeq	XM_001726418.1	ILMN_345550	LOC730389	XM_001726418.1	XM_001726418.1		730389	169170270	XM_001726418.1	LOC730389	XP_001726470.1	ILMN_3244130	0006660095	S	540	CCGCTTTTGACTTTCCGCGGCCTCTGCAGGCCCCGAACTTGACTTCCATT	7	-	56897588-56897628:56897629-56897637		PREDICTED: Homo sapiens hypothetical LOC730389 (LOC730389), mRNA.					
Homo sapiens	RefSeq	XR_016034.2	ILMN_178848	LOC729960	XR_016034.2	XR_016034.2		729960	169202533	XR_016034.2	LOC729960		ILMN_3299074	0002640349	M	857	ATCATGCACTGAATTCAAGACTGTTTCTTGGACGTCCTCGGTGGAAACTT	11	+	49348450-49348499	11p11.12d	PREDICTED: Homo sapiens misc_RNA (LOC729960), miscRNA.					
Homo sapiens	RefSeq	NM_000142.2	ILMN_25429	FGFR3	NM_022965.1	NM_022965.1		2261	13112047	NM_022965.1	FGFR3	NP_075254.1	ILMN_1723123	0006520139	A	3649	TCACCCAAACCGGCAGGTGCGATTTTGTTAACCCAGCGACGAACTTTCCG	4	+	1780312-1780361	4p16.3b	Homo sapiens fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism) (FGFR3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11294897] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16597617] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10918587] [evidence TAS]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 10918587] [evidence TAS]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8601314] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 10918587] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 10918587] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 7923141] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14732692] [evidence IPI]	HSFGFR3EX; JTK4; CD333; ACH; CEK2	HSFGFR3EX; JTK4; CD333; ACH; CEK2
Homo sapiens	RefSeq	NM_001344.1	ILMN_14323	DAD1	NM_001344.1	NM_001344.1		1603	4503252	NM_001344.1	DAD1	NP_001335.1	ILMN_1731619	0004220181	S	333	CCCAGAGCGAGCCTTTGCTGATTTTCTCTTTGCCAGCACCATCCTGCACC	14	-	22113868-22113917	14q11.2e	Homo sapiens defender against cell death 1 (DAD1), mRNA.	A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [pmid 15835887] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 8413235] [evidence TAS]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [pmid 15835887] [evidence IC ]	Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [pmid 15835887] [evidence IC ]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	OST2	OST2
Homo sapiens	RefSeq	NM_005022.2	ILMN_2354	PFN1	NM_005022.2	NM_005022.2		5216	16753213	NM_005022.2	PFN1	NP_005013.1	ILMN_2151817	0006940066	S	699	GGCTGGATGGACAGACACCTCCCCCTACCCATATCCCTCCCGTGTGTGGT	17	-	4849005-4849054	17p13.2b	Homo sapiens profilin 1 (PFN1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Homo sapiens	RefSeq	NM_005022.2	ILMN_2354	PFN1	NM_005022.2	NM_005022.2		5216	16753213	NM_005022.2	PFN1	NP_005013.1	ILMN_1712950	0002850402	S	419	GGGGCCCCCACCTTCAATGTCACTGTCACCAAGACTGACAAGACGCTAGT	17	-	4849285-4849292:4849923-4849964	17p13.2b	Homo sapiens profilin 1 (PFN1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Homo sapiens	RefSeq	NM_004775.2	ILMN_22156	B4GALT6	NM_004775.2	NM_004775.2		9331	13929471	NM_004775.2	B4GALT6	NP_004766.1	ILMN_1732555	0004010553	S	3726	CAGTGAACTTAATATGTTTCTGTGAGAGTGACAGAGCTGTGCCCGTTTAT	18	-	27457187-27457236	18q12.1d	Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 (B4GALT6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 9597550] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	beta4Gal-T6; B4Gal-T6	beta4Gal-T6; B4Gal-T6
Homo sapiens	RefSeq	NM_024906.1	ILMN_8948	SCD5	NM_024906.2	NM_024906.2		79966	148596937	NM_024906.2	SCD5	NP_079182.2	ILMN_1746164	0000610128	S	1157	CCACACCCAGGCCTTTTTTAACGGTGTGAAGCATAGACAGAGCTGCAGTC	4	-	83800937-83800986	4q21.22a	Homo sapiens stearoyl-CoA desaturase 5 (SCD5), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	HSCD5; SCD4; FLJ21032; SCD2; ACOD4; FADS4	HSCD5; SCD4; FLJ21032; SCD2; ACOD4; FADS4
Homo sapiens	RefSeq	NM_001001786.1	ILMN_22309	BLID	NM_001001786.1	NM_001001786.1		414899	49169819	NM_001001786.1	BLID	NP_001001786.1	ILMN_1807331	0004250441	S	500	GTACAATCTTGGCTCCTCTGCCATGAAGCGGAATGTTCCTGGACATGTGC	11	-	121491584-121491633	11q24.1a	Homo sapiens BH3-like motif containing, cell death inducer (BLID), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		BRCC2; MGC163235; MGC163233	BRCC2; MGC163235; MGC163233
Homo sapiens	RefSeq	NM_033240.2	ILMN_26450	PML	NM_033240.2	NM_033240.2		5371	67089156	NM_033240.2	PML	NP_150243.2	ILMN_2248192	0007560546	I	2408	GGGGATCTGAATAGAGTGAAAGGTTGGACTGGGTGGCCCCTGAGGTCTCT	15	+	72114482-72114531	15q24.1b	Homo sapiens promyelocytic leukemia (PML), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16778193] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [pmid 12915590] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16778193] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9294197] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16778193] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12915590] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 16778193] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 15195100] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16778193] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9885291] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16778193] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11080164] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9885291] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9448006] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 10910364] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9448006] [evidence IDA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 16778193] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 12773567] [evidence NAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 16912307] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [pmid 12773567] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 16915281] [evidence IDA]; Any host process that results in the promotion of antiviral immune response mechanisms, thereby limiting viral replication [goid 2230] [pmid 16873256] [evidence IMP]; Any host process that results in the promotion of antiviral immune response mechanisms, thereby limiting viral replication [goid 2230] [pmid 16873257] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 12915590] [evidence IDA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 11080164] [evidence IDA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 15195100] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11080164] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9583681] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle [goid 6977] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 12773567] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9583681] [evidence IDA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 12402044] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 9448006] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 16915281] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 9583681] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 7935403] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 9448006] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 9395203] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia) [goid 30578] [pmid 8643677] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia) [goid 30578] [pmid 10779416] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the removal of acetyl groups from histones [goid 31065] [pmid 11259576] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 32938] [pmid 16915281] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence ISS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [pmid 9395203] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 12773567] [evidence IDA]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [pmid 17332504] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [pmid 1652369] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9671405] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9294197] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11432836] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 1652369] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 11432836] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 11080164] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15626733] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10938104] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9885291] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15626733] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14976184] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16915281] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11259576] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12915590] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10610177] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9448006] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10669754] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9570750] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10597310] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9885291] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11500381] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12915590] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9294197] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11259576] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11080164] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12402044] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10610177] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15195100] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16501113] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9448006] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12773567] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 7729428] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 7935403] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 11259576] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 7935403] [evidence IDA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [pmid 7729428] [evidence IDA]	PP8675; RNF71; TRIM19; MYL	PP8675; RNF71; MYL; TRIM19
Homo sapiens	RefSeq	NM_018315.3	ILMN_18088	FBXW7	NM_018315.4	NM_018315.4		55294	125991238	NM_018315.4	FBXW7	NP_060785.2	ILMN_1655906	0003930184	I	390	ACTGCCAAGCAGCCGGACACACGGGGGCACAGAATCACTGAAGGGGAAAA	4	-	153493121-153493170	4q31.3c	Homo sapiens F-box and WD repeat domain containing 7 (FBXW7), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 12354302] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15070733] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17157259] [evidence IPI]	DKFZp686F23254; AGO; FBXW6; SEL-10; CDC4; FBX30; SEL10; FBW7	DKFZp686F23254; AGO; FBXW6; SEL-10; CDC4; FBX30; SEL10; FBW7
Homo sapiens	RefSeq	NM_005295.1	ILMN_3453	GPR22	NM_005295.2	NM_005295.2		2845	91106201	NM_005295.2	GPR22	NP_005286.2	ILMN_1684865	0006380273	S	2224	CCCTCCGGCGAGCTGTGAAACGACACCGTGAACGACGAGAAAGACAAAAG	7	+	106902619-106902668	7q22.3c	Homo sapiens G protein-coupled receptor 22 (GPR22), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9073069] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9073069] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC129847	MGC129847
Homo sapiens	RefSeq	NM_005950.1	ILMN_22286	MT1G	NM_005950.1	NM_005950.1		4495	10835229	NM_005950.1	MT1G	NP_005941.1	ILMN_1715401	0001170300	S	252	CGCCTGATGTCGGGACAGCCCTGCTCCCAAGTACAAATAGAGTGACCCGT	16	-	56700747-56700790:56700791-56700796	16q13b	Homo sapiens metallothionein 1G (MT1G), mRNA.			Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12970870] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with cadmium (Cd) ions [goid 46870] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MT1; MT1K; MGC12386	MT1; MT1K; MGC12386
Homo sapiens	RefSeq	XM_932570.1	ILMN_44932	LOC644993	XM_944350.2	XM_944350.2		644993	113416199	XM_944350.2	LOC644993	XP_949443.1	ILMN_1657886	0007040082	S	162	GCAGAGCAAGATAAGGCCAGGTTTCAGAAAGAATAGCTGTTTACCATCAA				4q25b	PREDICTED: Homo sapiens hypothetical LOC644993 (LOC644993), mRNA.					
Homo sapiens	RefSeq	XM_928079.1	ILMN_41187	LOC643738	XM_928079.1	XM_928079.1		643738	88965449	XM_928079.1	LOC643738	XP_933172.1	ILMN_1754186	0001030110	S	779	AAACTCTGTGTCCCCGGAGCCCACTCACCGTCTCATCTTTCCTCCAAACC	3	-	113061393-113061442		PREDICTED: Homo sapiens hypothetical protein LOC643738 (LOC643738), mRNA.					
Homo sapiens	RefSeq	NM_145109.1	ILMN_14315	MAP2K3	NM_145109.2	NM_145109.2		5606	117306180	NM_145109.2	MAP2K3	NP_659731.1	ILMN_1680777	0000870280	I	221	GTCCTCTAGATTAGTCTCCACCGCCGTCCAGGACCCACTTGCAGCATGGA	17	+	21128781-21128825:21128826-21128830	17p11.2b	Homo sapiens mitogen-activated protein kinase kinase 3 (MAP2K3), transcript variant B, mRNA.		The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7839144] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [pmid 11980910] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11980910] [evidence IDA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 7839144] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11980910] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MAPKK3; PRKMK3; MEK3; MKK3	MAPKK3; PRKMK3; MEK3; MKK3
Homo sapiens	RefSeq	NM_138937.1	ILMN_21552	REG3A	NM_138937.1	NM_138937.1		5068	21070992	NM_138937.1	REG3A	NP_620354.1	ILMN_2382679	0007100333	A	707	CCTCCCCGCTGTCATTTCAGTCTCTTCATTTTGTCATACGGCCTAAGGCT	2	-	79384160-79384209	2p12e	Homo sapiens regenerating islet-derived 3 alpha (REG3A), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8997243] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1325291] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8997243] [evidence TAS]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [pmid 8997243] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8997243] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8997243] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 1325291] [evidence TAS]	PAP1; REG-III; INGAP; REG3; HIP; PAP-H; PBCGF; PAP	PAP1; REG-III; INGAP; REG3; HIP; PAP-H; PBCGF; PAP
Homo sapiens	RefSeq	NM_001017999.1	ILMN_16465	KIAA1026	NM_001017999.1	NM_001017999.1		23254	63999740	NM_001017999.1	KIAA1026	NP_001017999.1	ILMN_1680399	0001850672	I	198	ACCAGGCCATCCAGTTCCAGAACCACTGCTCTTCACTGTCATTGTGGCCA	1	+	15145199-15145248	1p36.21b-p36.21a	Homo sapiens kazrin (KIAA1026), transcript variant D, mRNA.				RP1-21O18.1	RP1-21O18.1
Homo sapiens	RefSeq	XM_942166.1	ILMN_44916	C10ORF141	NM_001039762.1	NM_001039762.1		642938	89886200	NM_001039762.1	C10orf141	NP_001034851.1	ILMN_1730047	0004070204	S	4270	ACTCTGATACAAAAGCAAGGTAAAACGCACAGGGTTCCCTTATGTAGATG	10	-	128823767-128823816	10q26.2b	Homo sapiens chromosome 10 open reading frame 141 (C10orf141), mRNA.		The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]		FLJ45557	
Homo sapiens	RefSeq	NM_001039762.1	ILMN_44916	C10ORF141	NM_001039762.1	NM_001039762.1		642938	89886200	NM_001039762.1	C10orf141	NP_001034851.1	ILMN_2071682	0003440735	S	4284	GCAAGGTAAAACGCACAGGGTTCCCTTATGTAGATGTACACATGGCATTG	10	-	128823753-128823802	10q26.2b	Homo sapiens chromosome 10 open reading frame 141 (C10orf141), mRNA.		The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]		FLJ45557	FLJ45557
Homo sapiens	RefSeq	NM_005199.4	ILMN_25850	CHRNG	NM_005199.4	NM_005199.4		1146	61743913	NM_005199.4	CHRNG	NP_005190.4	ILMN_1784633	0001780332	S	1896	GCCCGAAGGACTGTTTTGTATAATACCTTCGGACTTGGGACTGGCTCCCC	2	+	233118991-233119040	2q37.1c	Homo sapiens cholinergic receptor, nicotinic, gamma (CHRNG), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3967651] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8040310] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 3967651] [evidence TAS]	 [goid 4889] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA];  [goid 4889] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [pmid 3967651] [evidence TAS]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [pmid 3967651] [evidence TAS]	MGC133376; ACHRG	MGC133376; ACHRG
Homo sapiens	RefSeq	NR_024393.1	ILMN_370225	LOC727677	NR_024393.1	NR_024393.1		727677	211971085	NR_024393.1	LOC727677		ILMN_3237569	0003130634	S	1255	CCTCACTGACTACCTTCAGGGCAAAAAGGAAGAGAGGCACTCCAGATCAG	8	-	128455702-128455751		Homo sapiens hypothetical LOC727677 (LOC727677), non-coding RNA.					
Homo sapiens	RefSeq	XM_373553.3	ILMN_39712	LOC387895	XM_373553.4	XM_373553.4		387895	113423537	XM_373553.4	LOC387895	XP_373553.2	ILMN_1672049	0003830674	S	138	TCAGGAAGACAGTTAATCCCGTCATGTATTGACCCGGAAACATCATCTCA	12	-	125798588-125798626:125822578-125822588	12q24.32a	PREDICTED: Homo sapiens hypothetical gene supported by BC040060 (LOC387895), mRNA.					
Homo sapiens	RefSeq	NM_198889.1	ILMN_3021	ANKRD17	NM_198889.1	NM_198889.1		26057	38683815	NM_198889.1	ANKRD17	NP_942592.1	ILMN_1712019	0006940520	A	8008	CACTGTAATGGCTGCTACAGAGATGGACCATCTTCATCATCACCAGTGGT	4	-	74159930-74159979	4q13.3d	Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	KIAA0697; GTAR; FLJ22206; NY-BR-16	KIAA0697; GTAR; FLJ22206; NY-BR-16
Homo sapiens	RefSeq	NM_198889.1	ILMN_3021	ANKRD17	NM_198889.1	NM_198889.1		26057	38683815	NM_198889.1	ANKRD17	NP_942592.1	ILMN_2406335	0004210437	A	8086	TCTGAGAATTTAAAAAGCCACCACTGTTCCCAGTCAGCATATACAAGCTC	4	-	74159852-74159901	4q13.3d	Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	KIAA0697; GTAR; FLJ22206; NY-BR-16	KIAA0697; GTAR; FLJ22206; NY-BR-16
Homo sapiens	RefSeq	NM_000864.3	ILMN_25651	HTR1D	NM_000864.3	NM_000864.3		3352	39725667	NM_000864.3	HTR1D	NP_000855.1	ILMN_1804886	0001780010	S	2521	TGGAGAGAGATTCAGAAGTTAGGGGTAGCGGGGGTAGGATGGTTGGGACC	1	-	23391239-23391288	1p36.12a	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 1D (HTR1D), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1652050] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 1565658] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 1565658] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 1565658] [evidence TAS]	5-HT1D; HTR1DA; HT1DA; RDC4; HTRL	5-HT1D; HTR1DA; HT1DA; RDC4; HTRL
Homo sapiens	RefSeq	XM_001125808.2	ILMN_169013	LOC727758	XM_001125808.2	XM_001125808.2		727758	169212658	XM_001125808.2	LOC727758	XP_001125808.1	ILMN_3248379	0003840270	S	779	GTGACCGAGTGCCTTGTGGAATCGTGTGGGATGCTACCTGATAAACCAGG	18	+	110709-110758	18p11.32c	PREDICTED: Homo sapiens similar to Rho-associated, coiled-coil containing protein kinase p160ROCK (LOC727758), mRNA.					
Homo sapiens	RefSeq	NM_145266.4	ILMN_18475	NUDCD2	NM_145266.4	NM_145266.4		134492	40556270	NM_145266.4	NUDCD2	NP_660309.1	ILMN_1751589	0000610376	S	415	GCGGATCCTTGGGTGCAAGACCAAATGCAGAGAAAGCTTACATTAGAGAG	5	-	162883947-162883996	5q34c	Homo sapiens NudC domain containing 2 (NUDCD2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]			DKFZp686E10109	DKFZp686E10109
Homo sapiens	RefSeq	NM_145266.4	ILMN_18475	NUDCD2	NM_145266.4	NM_145266.4		134492	40556270	NM_145266.4	NUDCD2	NP_660309.1	ILMN_2048822	0000670195	S	490	GACTTCAGTGGAGCAGAAATCTCAGGAAACTACACTAAAGGTGGACCAGA	5	-	162880994-162881043	5q34c	Homo sapiens NudC domain containing 2 (NUDCD2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]			DKFZp686E10109	DKFZp686E10109
Homo sapiens	RefSeq	NM_006996.1	ILMN_14198	SLC19A2	NM_006996.1	NM_006996.1		10560	27734718	NM_006996.1	SLC19A2	NP_008927.1	ILMN_2201668	0001450020	S	3102	CGACATACTCATTTGGTTTAAGCAGGAATCCTAGAAGCAAATGGATGGGG	1	-	167700290-167700339	1q24.2b	Homo sapiens solute carrier family 19 (thiamine transporter), member 2 (SLC19A2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10542220] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The directed movement of thiamin into, out of, within or between cells. Thiamin is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 15888] [pmid 10542220] [evidence NAS]; The chemical reactions and pathways involving thiamin (vitamin B1), and compounds derived from it [goid 42723] [pmid 3060175] [evidence EXP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of thiamin into, out of, within or between cells. Thiamin is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 15888] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [pmid 10542220] [evidence NAS]; Catalysis of the transfer of reduced folate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8518] [evidence IEA]; Catalysis of the transfer of thiamin from one side of the membrane to the other. Thiamin is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 15234] [pmid 10542220] [evidence TAS]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Catalysis of the transfer of reduced folate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8518] [evidence IEA]; Catalysis of the transfer of thiamin from one side of the membrane to the other. Thiamin is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 15234] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Catalysis of the transfer of reduced folate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8518] [evidence IEA]	TRMA; THTR1; TC1; THT1	TRMA; THTR1; TC1; THT1
Homo sapiens	RefSeq	NM_005963.3	ILMN_177142	MYH1	NM_005963.3	NM_005963.3		4619	115527081	NM_005963.3	MYH1	NP_005954.3	ILMN_2051113	0000110768	S	5755	AGAAGCGGAGGAACAATCCAACGTCAACCTCTCCAAATTCCGCAGGATCC	17	-	10395842-10395885:10397671-10397676	17p13.1a	Homo sapiens myosin, heavy chain 1, skeletal muscle, adult (MYH1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MyHC-2X/D; MYHa; MGC133384; MYHSA1	MyHC-2X/D; MYHa; MGC133384; MYHSA1
Homo sapiens	RefSeq	XR_040071.1	ILMN_334488	PPBPL2	XR_040071.1	XR_040071.1		10895	169166730	XR_040071.1	PPBPL2		ILMN_3297280	0007650072	M	156	TGTATCTGGGAGAAAGACTGGCTTGGTGCTCCTGGGGCTGGAGAGTGCCA				4q13.3d	PREDICTED: Homo sapiens misc_RNA (PPBPL2), miscRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7887923] [evidence TAS]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7887923] [evidence TAS]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 7887923] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7887923] [evidence TAS]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]		
Homo sapiens	RefSeq	NM_014206.1	ILMN_17021	C11ORF10	NM_014206.2	NM_014206.2		746	141801664	NM_014206.2	C11orf10	NP_055021.1	ILMN_1786759	0000630445	S	228	AGTGGCCTCACTCTTCATGGGCTTTGGAGTCCTCTTCCTGCTGCTCTGGG	11	-	61313860-61313909	11q12.2b	Homo sapiens chromosome 11 open reading frame 10 (C11orf10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_153325.2	ILMN_28411	DEFB125	NM_153325.2	NM_153325.2		245938	76563935	NM_153325.2	DEFB125	NP_697020.2	ILMN_1706077	0002970196	S	388	CCCGAGACTACTATGCCACCATCTGAGACTGCTACTTCCGAGACTATGCC	20	+	24975-25024	20p13f	Homo sapiens defensin, beta 125 (DEFB125), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		MGC57449; DEFB-25	MGC57449; DEFB-25
Homo sapiens	RefSeq	NM_181706.3	ILMN_37314	DNAJC24	NM_181706.4	NM_181706.4		120526	89111950	NM_181706.4	DNAJC24	NP_859057.4	ILMN_1685930	0005890300	S	2387	AGAACAAGAATTCAAAAGTGAGGTAGTCATCCAGGTTCCCCCTCCCACAA	11	+	31410118-31410167	11p13f	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 24 (DNAJC24), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	JJJ3; ZCSL3	Dph4
Homo sapiens	RefSeq	XM_936913.1	ILMN_43248	LOC653935	XM_936913.1	XM_936913.1		653935	89061111	XM_936913.1	LOC653935	XP_942006.1	ILMN_1698379	0001450184	S	71	CTCTCCAGATTCCCCAGAGTTCTCCTGAGAGCGACGACACCCTGTATCCT					PREDICTED: Homo sapiens similar to Melanoma-associated antigen C1 (MAGE-C1 antigen) (Cancer-testis antigen CT7) (LOC653935), mRNA.					
Homo sapiens	RefSeq	XR_037958.1	ILMN_347742	LOC401875	XR_037958.1	XR_037958.1		401875	169212143	XR_037958.1	LOC401875		ILMN_3213916	0000780707	A	844	GTCGGAGAAGCAGAAGGATGCCGTGGAGAAGAGCAAGAGCGTCAAGCAGA				17p11.2c	PREDICTED: Homo sapiens misc_RNA (LOC401875), miscRNA.					
Homo sapiens	RefSeq	NM_031934.3	ILMN_162833	RAB34	NM_031934.3	NM_031934.3		83871	31543536	NM_031934.3	RAB34	NP_114140.2	ILMN_1810486	0005720136	S	1448	GCTTGACCCCTGGACATTTGCACTGACTTTATCCAGACCAAAGAGCTGCC	17	-	24065672-24065721	17q11.2a	Homo sapiens RAB34, member RAS oncogene family (RAB34), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAH; RAB39	RAH; RAB39
Homo sapiens	RefSeq	NM_001037125.1	ILMN_170910	UNKL	NM_001037125.1	NM_001037125.1		64718	80861488	NM_001037125.1	UNKL	NP_001032202.1	ILMN_2126408	0006290097	S	1079	CCTTTGAGCAGAGAGCCACCCTCGCCTCTTTTGAATGACCTGGTGCTGCC	16	-	1448556-1448605	16p13.3e	Homo sapiens unkempt homolog (Drosophila)-like (UNKL), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC5179; ZC3HDC5L; FLJ12623; KIAA0734; ZC3H5L; C16orf28; FLJ23360	MGC5179; ZC3HDC5L; FLJ12623; KIAA0734; ZC3H5L; C16orf28; FLJ23360
Homo sapiens	RefSeq	XM_928117.1	ILMN_174482	LOC729252	XR_015937.1	XR_015937.1		729252	113426674	XR_015937.1	LOC729252		ILMN_1797704	0004760192	S	601	TAGTCCCTACTTCAAGACCATCGAGGACCTGAGGCACAAGATCATTGCGG	17	+	18284517-18284556:18284993-18285002	17p11.2f	PREDICTED: Homo sapiens similar to Keratin, type I cytoskeletal 14 (Cytokeratin-14) (CK-14) (Keratin-14) (K14) (LOC729252), mRNA.					
Homo sapiens	RefSeq	NM_001006600.1	ILMN_6627	ERBB2IP	NM_001006600.1	NM_001006600.1		55914	55770894	NM_001006600.1	ERBB2IP	NP_001006600.1	ILMN_2352401	0004480037	A	6410	GCCTCACGGAACAATGGATCTTCAGCAAACCTTAACTTCATTGTCTGCAC	5	+	65374937-65374986	5q12.3b	Homo sapiens erbb2 interacting protein (ERBB2IP), transcript variant 7, mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [pmid 10878805] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11375975] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11375975] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11375975] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11375975] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [pmid 11375975] [evidence ISS]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [pmid 11375975] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 11375975] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 11375975] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10878805] [evidence TAS]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 11375975] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11375975] [evidence NAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 11375975] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [pmid 11375975] [evidence NAS]; Any process by which a protein is transported to, or maintained in, basal regions of the cell [goid 45175] [pmid 11375975] [evidence NAS]; Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [pmid 11375975] [evidence NAS]	Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [pmid 11375975] [evidence TAS]; Interacting selectively with an integrin [goid 5178] [pmid 11375975] [evidence ISS]; Interacting selectively with an integrin [goid 5178] [pmid 11375975] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 11375975] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11375975] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11375975] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16714539] [evidence IPI]	ERBIN; LAP2	ERBIN; LAP2
Homo sapiens	RefSeq	NM_000256.2	ILMN_15648	MYBPC3	NM_000256.2	NM_000256.2		4607	13325073	NM_000256.2	MYBPC3	NP_000247.1	ILMN_1781184	0006940768	S	4015	CAGTCCTGAGTGGGTGTTGCACAGACTGGTCCACAGGGCTCCTGAAGGAA	11	-	47309662-47309711	11p11.2b	Homo sapiens myosin binding protein C, cardiac (MYBPC3), mRNA.	Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A region of the A band in which myosin-binding protein C is located and that can be seen by electron microscopy. This is a functional zone that also includes myosin [goid 14705] [pmid 15166115] [evidence NAS]	The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [pmid 7493025] [evidence IMP]; Any process that modulates the frequency, rate or extent of striated muscle contraction [goid 6942] [evidence ISS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that activates or increases the rate of ATP hydrolysis by an ATPase [goid 32781] [evidence ISS]; Any process that modulates the frequency, rate or extent of muscle filament sliding [goid 32971] [evidence ISS]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [pmid 11815426] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence ISS]	Functions to increase the rate of ATP hydrolysis [goid 1671] [evidence ISS]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15601779] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 7493025] [evidence IMP]; Interacting selectively with titin, any of a family of giant proteins found in striated and smooth muscle. In striated muscle, single titin molecules span half the sarcomere, with their N- and C-termini in the Z-disc and M-line, respectively [goid 31432] [pmid 7493025] [evidence NAS]; Interacting selectively with a heavy chain of a myosin complex [goid 32036] [pmid 17192269] [evidence IPI]	FHC; CMH4; MYBP-C	FHC; CMH4; MYBP-C
Homo sapiens	RefSeq	NM_138492.4	ILMN_1059	PRELID2	NM_138492.4	NM_138492.4		153768	45505153	NM_138492.4	PRELID2	NP_612501.3	ILMN_1668986	0005820332	I	312	TGTTTGAAAAGGTGTCCAGAAAAACCTGGCCATCTGCCTCCTGTCTTCCC	5	-	145205562-145205611	5q32c	Homo sapiens PRELI domain containing 2 (PRELID2), transcript variant 3, mRNA.				FLJ38376; MGC21644	FLJ38376; MGC21644
Homo sapiens	RefSeq	NM_015055.1	ILMN_4104	SWAP70	NM_015055.2	NM_015055.2		23075	93102363	NM_015055.2	SWAP70	NP_055870.2	ILMN_1785175	0006200753	S	3445	AATGAGGACAGAGAACCTCAGGTGTTCTTATGCTAGTGCTTGCTGAGTGC	11	+	9729342-9729391	11p15.4a	Homo sapiens SWAP switching B-cell complex 70kDa subunit (SWAP70), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Recombination occurring within or between DNA molecules in somatic cells [goid 16444] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	HSPC321; FLJ39540; KIAA0640; SWAP-70	HSPC321; KIAA0640; SWAP-70
Homo sapiens	RefSeq	NM_001005567.1	ILMN_6698	OR51B5	NM_001005567.1	NM_001005567.1		282763	53933292	NM_001005567.1	OR51B5	NP_001005567.1	ILMN_1657002	0000940025	S	423	GATTGGGCTGGGAGTTCTGATGAGGGGATTTGTATCCGTTGTTCCCCCAA	11	-	5364282-5364331	11p15.4c	Homo sapiens olfactory receptor, family 51, subfamily B, member 5 (OR51B5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11121057] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 11121057] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 11121057] [evidence NAS]	OR11-37; HOR5'Beta5	OR11-37; HOR5'Beta5
Homo sapiens	RefSeq	NM_001005567.1	ILMN_6698	OR51B5	NM_001005567.1	NM_001005567.1		282763	53933292	NM_001005567.1	OR51B5	NP_001005567.1	ILMN_2063446	0003140619	S	555	CGCCTGTGCTGATACCACCTTCAACCGACTGTACCCAGCTGTGCTTGTAG	11	-	5364150-5364199	11p15.4c	Homo sapiens olfactory receptor, family 51, subfamily B, member 5 (OR51B5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11121057] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 11121057] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 11121057] [evidence NAS]	OR11-37; HOR5'Beta5	OR11-37; HOR5'Beta5
Homo sapiens	Unigene	Hs.479551	ILMN_95692	HS.479551	Hs.479551		Hs.479551		19737101	BQ012200			ILMN_1900344	0003710747	S	21	TTTGCAGTGAGCTGATATTGTCTGCTTCCTAGGACTGAGCCACCAGGATC	4	+	39864729-39864778		UI-1-BC1p-asj-h-02-0-UI.s1 NCI_CGAP_Pl3 Homo sapiens cDNA clone UI-1-BC1p-asj-h-02-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NR_003012.1	ILMN_179830	SCARNA11	NR_003012.1	NR_003012.1		677780	91982754	NR_003012.1	SCARNA11		ILMN_3236010	0005310066	S	45	GGGTAGTCTGGCAGGACACACAGCAATTCCCTCTCAGTTTAGGAGGGCCG	12	-	6690681-6690730	12p13.31d	Homo sapiens small Cajal body-specific RNA 11 (SCARNA11), guide RNA.				ACA57	ACA57
Homo sapiens	RefSeq	NM_031936.3	ILMN_11305	GPR61	NM_031936.4	NM_031936.4		83873	149773489	NM_031936.4	GPR61	NP_114142.3	ILMN_1671225	0006520768	S	2490	TGCAGCACTGGGTTGGAGAGAGGGCACGGGAGTTGGTCTTGGCTGTTCAT	1	+	109889645-109889694	1p13.3b	Homo sapiens G protein-coupled receptor 61 (GPR61), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	GPCR3; BALGR	GPCR3; BALGR
Homo sapiens	RefSeq	NM_017847.3	ILMN_21127	C1ORF27	NM_017847.4	NM_017847.4		54953	142350830	NM_017847.4	C1orf27	NP_060317.3	ILMN_1704222	0003120195	S	3447	GTAGGCTTCCTAACAGCAACAATGTACCCAAAAGAGGGTAGAATTCTGAG	1	+	184656789-184656838	1q31.1a	Homo sapiens chromosome 1 open reading frame 27 (C1orf27), mRNA.				FLJ20505; odr-4; TTG1	FLJ20505; odr-4; TTG1
Homo sapiens	RefSeq	NM_000171.1	ILMN_24115	GLRA1	NM_000171.1	NM_000171.1		2741	4504018	NM_000171.1	GLRA1	NP_000162.1	ILMN_1764797	0000580192	S	1447	GCGCCAACAACAGTAACACCACCAACCCCCCTCCTGCACCATCTAAGTCC	5	-	151182573-151182622	5q33.1e	Homo sapiens glycine receptor, alpha 1 (startle disease/hyperekplexia, stiff man syndrome) (GLRA1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11973623] [evidence IMP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2155780] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7506679] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 7506679] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IEA]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IEA]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [pmid 11973623] [evidence IMP]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [pmid 8298642] [evidence IMP]; A process carried out by the nervous system that is required for the proper control of respiratory gaseous exchange. This process occurs in the respiratory center of the brain in vertebrates [goid 2087] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 2155780] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [pmid 8137830] [evidence IDA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 11973623] [evidence IMP]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 2155780] [evidence IDA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; Any process that modulates the frequency, rate or extent of the process of gaseous exchange between an organism and its environment [goid 43576] [evidence IEA]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation [goid 51970] [pmid 11973623] [evidence IMP]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine [goid 60012] [evidence IEA]; A reflex process in which an animal immediately tries to turn over after being placed in a supine position [goid 60013] [evidence IEA]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence IEA]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11929858] [evidence IPI]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [evidence IEA]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [pmid 2155780] [evidence IDA]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [pmid 15748848] [evidence IDA]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [pmid 8137830] [evidence IDA]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [pmid 2155780] [evidence IDA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with taurine [goid 30977] [pmid 15748848] [evidence IDA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	STHE	STHE
Homo sapiens	RefSeq	XR_017348.2	ILMN_177105	LOC646891	XR_017348.2	XR_017348.2		646891	169162612	XR_017348.2	LOC646891		ILMN_3276647	0000160538	M	1115	CTCCTTGTATGCCCTGAAATCACCACCGCTTGATCTAAATGTGCAGTTGC	1	-	173280307-173280356	1q25.1b	PREDICTED: Homo sapiens misc_RNA (LOC646891), miscRNA.					
Homo sapiens	RefSeq	NM_000128.2	ILMN_170709	F11	NM_000128.3	NM_000128.3		2160	116805318	NM_000128.3	F11	NP_000119.1	ILMN_1807101	0004480114	A	1936	GCCAAGATACCCTTAGTGACCAACGAAGAGTGCCAGAAGAGATACAGAGG	4	+	187208864-187208913	4q35.2a	Homo sapiens coagulation factor XI (F11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9593722] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9593722] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 9593722] [evidence NAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 9593722] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	FXI; MGC141891	FXI
Homo sapiens	RefSeq	NM_000128.2	ILMN_170709	F11	NM_000128.3	NM_000128.3		2160	116805318	NM_000128.3	F11	NP_000119.1	ILMN_1764061	0000020180	I	768	CTGCCACTTTTTCACGTACGCCACAAGGCAGTTTCCCAGCCTGGAGCATC	4	+	187195379-187195428	4q35.2a	Homo sapiens coagulation factor XI (F11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9593722] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9593722] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 9593722] [evidence NAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 9593722] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	FXI; MGC141891	FXI
Homo sapiens	RefSeq	XR_038919.1	ILMN_342438	LOC390345	XR_038919.1	XR_038919.1		390345	169204793	XR_038919.1	LOC390345		ILMN_3284584	0002810050	M	600	CTCTAGAGAAGTGGTGGGCCCTGCACTCATGAGGGCTTTCACTGTGCTTC				12q21.2a	PREDICTED: Homo sapiens misc_RNA (LOC390345), miscRNA.					
Homo sapiens	RefSeq	NM_012186.1	ILMN_8690	FOXE3	NM_012186.2	NM_012186.2		2301	111074530	NM_012186.2	FOXE3	NP_036318.1	ILMN_1719934	0002360475	A	1704	TTCCCACAAGTTTGCCCCCCACCTCCACTTACCTGTCTGCCCTCAGCTTC	1	+	47656034-47656083	1p33d	Homo sapiens forkhead box E3 (FOXE3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 10652278] [evidence IDA]	The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10652278] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8825632] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FREAC8; FKHL12; ASMD	FREAC8; FKHL12; ASMD
Homo sapiens	RefSeq	NM_012186.1	ILMN_8690	FOXE3	NM_012186.2	NM_012186.2		2301	111074530	NM_012186.2	FOXE3	NP_036318.1	ILMN_1815599	0000510730	I	168	GGGGGGCCGTGTCCATATAAAGCGGGTCGGCGGCCCCTGCGGTCCCGGAG	1	+	47654498-47654547	1p33d	Homo sapiens forkhead box E3 (FOXE3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 10652278] [evidence IDA]	The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10652278] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8825632] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FREAC8; FKHL12; ASMD	FREAC8; FKHL12; ASMD
Homo sapiens	RefSeq	NM_018961.2	ILMN_27169	UBASH3A	NM_018961.2	NM_018961.2		53347	49640012	NM_018961.2	UBASH3A	NP_061834.1	ILMN_1684450	0005560014	I	638	GCCCTAACCTGAGGCTGAGCAATTTAACTAGAGCCTCCTTCGTGAGCCAC	21	+	42706636-42706685	21q22.3b	Homo sapiens ubiquitin associated and SH3 domain containing, A (UBASH3A), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	Any process that modulates the frequency, rate, or extent of production of a cytokine [goid 1817] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IEA]		TULA; STS-2; CLIP4	TULA; STS-2; CLIP4
Homo sapiens	RefSeq	NM_001080850.1	ILMN_175556	LOC728621	NM_001080850.1	NM_001080850.1		728621	124249395	NM_001080850.1	LOC728621	NP_001074319.1	ILMN_2137382	0003710446	S	10	CACCATCTCCAGAGTCGTTGGTGGCTACCCATGCTAAGTCATTAGTCCTC	1	+	42772138-42772187	1p34.2b-p34.2a	Homo sapiens hypothetical protein LOC728621 (LOC728621), mRNA.				PFD6L; FLJ20972; PFDN6L	PFD6L; FLJ20972; PFDN6L
Homo sapiens	RefSeq	NM_175047.2	ILMN_1984	PILRB	NM_175047.2	NM_175047.2		29990	30179912	NM_175047.2	PILRB	NP_778212.2	ILMN_1685534	0004730484	I	545	GACTGCAGAGAAAGGCTGTGTGCATCCGCTGTCTACTCCACTGTCTCCTC	7	+	99785303-99785352	7q22.1c	Homo sapiens paired immunoglobin-like type 2 receptor beta (PILRB), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10660620] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [pmid 10660620] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10660620] [evidence IPI]	FDFACT2; FDFACT1	FDFACT2; FDFACT1
Homo sapiens	RefSeq	NM_007198.2	ILMN_23472	PROSC	NM_007198.2	NM_007198.2		11212	38788480	NM_007198.2	PROSC	NP_009129.1	ILMN_1748908	0001050039	S	2588	CCTTGTCCTGAGGAGCACTTTCCAGGCATAGTTACAGCTTCCCCACTGTA	8	+	37756037-37756086	8p12a	Homo sapiens proline synthetase co-transcribed homolog (bacterial) (PROSC), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10496079] [evidence TAS]			FLJ11861	FLJ11861
Homo sapiens	RefSeq	NM_001586.1	ILMN_14309	TEX28	NM_001586.1	NM_001586.1		1527	4503176	NM_001586.1	TEX28	NP_001577.1	ILMN_1670139	0000360195	S	4	TGCCAGCACTAGCCCCCATGTCGGTCTCAGAGAACCTTCTCCCCACCTCT	X	-	153523385-153523434	Xq28g	Homo sapiens testis expressed 28 (TEX28), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TEX28; CXorf2; fTEX	TEX28; CXorf2; fTEX
Homo sapiens	RefSeq	XR_016968.2	ILMN_171692	LOC400011	XR_016968.2	XR_016968.2		400011	169204254	XR_016968.2	LOC400011		ILMN_3284361	0005910747	M	2822	TTTCGAACAAGGTGTCTGGTCTTTTCTGGAGCCTGACGATGAGGGGAGTG	12	-	16443834-16443883	12p12.3d	PREDICTED: Homo sapiens misc_RNA (LOC400011), miscRNA.					
Homo sapiens	RefSeq	XR_039243.1	ILMN_353001	LOC653340	XR_039243.1	XR_039243.1		653340	169162895	XR_039243.1	LOC653340		ILMN_3249496	0000610360	S	127	TGTGATCATAGCTCACTATAGCTTTGGCCTTCTGAGATCAAGCAATCCTC	1	-	130538-130587	1p36.33b	PREDICTED: Homo sapiens misc_RNA (LOC653340), miscRNA.					
Homo sapiens	RefSeq	NM_153648.2	ILMN_5558	SLC24A4	NM_153648.2	NM_153648.2		123041	59938786	NM_153648.2	SLC24A4	NP_705934.1	ILMN_1815949	0000130291	I	2	GGCCCGCAGATCTCTCTGGTTCCCCTCTCTGCCCCGTCTCCAGCTTTTTT	14	+	91858679-91858728	14q32.12b	Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 (SLC24A4), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SLC24A2; NCKX4; FLJ38852; SHEP6	SLC24A2; NCKX4; FLJ38852; SHEP6
Homo sapiens	RefSeq	NM_153646.2	ILMN_5558	SLC24A4	NM_153648.2	NM_153648.2		123041	59938786	NM_153648.2	SLC24A4	NP_705934.1	ILMN_1675391	0002260414	A	4146	CACATGGCCCCTGATGGCGTCCCTGCTGGTTTTCAATTCTCTGAAGCCTT	14	+	92032077-92032126	14q32.12b	Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 (SLC24A4), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SLC24A2; NCKX4; FLJ38852; SHEP6	SLC24A2; NCKX4; FLJ38852; SHEP6
Homo sapiens	RefSeq	NR_029480.1	ILMN_387947	MIRLET7C	NR_029480.1	NR_029480.1		406885	262205602	NR_029480.1	MIRLET7C		ILMN_3309179	0002360634	S	1	CATCCGGGTTGAGGTAGTAGGTTGTATGGTTTAGAGTTACACCCTGGGAG				21q21.1b	Homo sapiens microRNA let-7c (MIRLET7C), microRNA.					
Homo sapiens	RefSeq	NM_001913.2	ILMN_8630	CUX1	NM_001913.2	NM_001913.2		1523	31652235	NM_001913.2	CUX1	NP_001904.2	ILMN_2330213	0007000343	A	974	AGACTCCAGGCCAGCCTCACCAAGCTGCGGGAGAATTCGGCCAGCCAGAT	7	+	101600451-101600500	7q22.1e	Homo sapiens cut-like homeobox 1 (CUX1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 1301999] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1301999] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 1301999] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]	p110; CASP; GOLIM6; CUX; CDP1; Cux/CDP; Nbla10317; Clox; p75; CUTL1; COY1; p200; p100; CDP; CDP/Cut	p110; CASP; GOLIM6; CUX; CDP1; Cux/CDP; Nbla10317; Clox; p75; CUTL1; COY1; p200; p100; CDP; CDP/Cut
Homo sapiens	Unigene	Hs.539356	ILMN_104466	HS.539356	Hs.539356		Hs.539356		33328309	AF529371			ILMN_1820887	0001820408	S	257	CTAGGGAGACACAGAGCTACCAGAAAGCCCAACCCACCCCCATCTCTTTC	12	+	55677268-55677317		Homo sapiens HBcAg-binding protein (HBCBP) mRNA, complete cds					
Homo sapiens	RefSeq	NM_006620.2	ILMN_179706	HBS1L	NM_006620.2	NM_006620.2		10767	24431963	NM_006620.2	HBS1L	NP_006611.1	ILMN_2218024	0000010520	S	6880	TACACTGCCTCTCCAGAAATCAGGAGTAGCAATATTAACACTGGACAAAG	6	-	135323428-135323477	6q23.3a	Homo sapiens HBS1-like (S. cerevisiae) (HBS1L), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 9872408] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9872408] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 9872408] [evidence TAS]	HSPC276; DKFZp686L13262; ERFS; EF-1a; HBS1	HSPC276; DKFZp686L13262; ERFS; EF-1a; HBS1
Homo sapiens	RefSeq	NM_032782.3	ILMN_30017	HAVCR2	NM_032782.3	NM_032782.3		84868	49574533	NM_032782.3	HAVCR2	NP_116171.3	ILMN_1693826	0005220093	S	2222	GACGGTATAGGCTTGATCTGTCTTGCTTATTGTTGCCCCCTGCGCCTAGC	5	-	156512891-156512940	5q33.3a	Homo sapiens hepatitis A virus cellular receptor 2 (HAVCR2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TIMD3; FLJ14428; KIM-3; Tim-3; TIM3	TIMD3; FLJ14428; KIM-3; Tim-3; TIM3
Homo sapiens	RefSeq	XM_930113.1	ILMN_45620	LOC652071	XM_941396.2	XM_941396.2		652071	113415351	XM_941396.2	LOC652071	XP_946489.1	ILMN_1683597	0002690020	S	220	GCTCCCAGGAGAAACAAGCTTGACCACTATGCTATCATCAAGTTTCCGCT					PREDICTED: Homo sapiens similar to 60S ribosomal protein L23a (LOC652071), mRNA.					
Homo sapiens	RefSeq	NM_031466.3	ILMN_25114	TRAPPC9	NM_031466.4	NM_031466.4		83696	142377653	NM_031466.4	TRAPPC9	NP_113654.3	ILMN_1711368	0005890072	S	4258	CATGGGCAACTTGGCAGGAGAGATGGTGCCGTAGGAGGTCGTGGATGGTT	8	-	140811934-140811983	8q24.3b	Homo sapiens trafficking protein particle complex 9 (TRAPPC9), mRNA.				IBP; KIAA1882; T1; MGC4769; MGC4737	IBP; KIAA1882; T1; MGC4769; MGC4737
Homo sapiens	RefSeq	NM_014763.2	ILMN_8811	MRPL19	NM_014763.3	NM_014763.3		9801	94557304	NM_014763.3	MRPL19	NP_055578.2	ILMN_1771149	0002680541	S	1157	CCAGAATGGTCTTTAATGAGCATGGAACCTGAGCAAAGGGAATAGGTGGG	2	+	75736172-75736221	2p12i	Homo sapiens mitochondrial ribosomal protein L19 (MRPL19), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10942595] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 10942595] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	RLX1; MRP-L15; RPML15; MGC20675; KIAA0104	RLX1; MRP-L15; RPML15; MGC20675; KIAA0104
Homo sapiens	RefSeq	NM_004154.3	ILMN_164227	P2RY6	NM_004154.3	NM_004154.3		5031	29029606	NM_004154.3	P2RY6	NP_004145.1	ILMN_1782275	0005130291	I	2169	ACCCTCCAGACAAGGGCAAGAGTTAGCCAGATGCTCCAGGCAGTGGGAAG	11	+	72687081-72687130	11q13.4b	Homo sapiens pyrimidinergic receptor P2Y, G-protein coupled, 6 (P2RY6), transcript variant 4, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8670200] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 8670200] [evidence TAS]; The directed movement of chloride ions across an epithelium [goid 30321] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA];  [goid 45029] [evidence IEA]	P2Y6; MGC15335	P2Y6; MGC15335
Homo sapiens	Unigene	Hs.540987	ILMN_105461	HS.540987	Hs.540987		Hs.540987		3039507	AA904384			ILMN_1899147	0001990121	S	97	CACACTCAGCTCTGGCTTAGAGGACAATGGAAGTGGAGCTTGCACCCAGC	18	+	69666919-69666968		ol15e09.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1523560 3, mRNA sequence					
Homo sapiens	Unigene	Hs.436107	ILMN_91600	HS.436107	Hs.436107		Hs.436107		6698171	AW291535			ILMN_1914013	0006400041	S	193	GAGACTTTGCCATGCACTAGCTGTGTGACCTTAGGAAAATTACCCATGTG	3	-	144330865-144330914		UI-H-BI2-agk-b-12-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2724454 3, mRNA sequence					
Homo sapiens	RefSeq	NM_181042.2	ILMN_16253	PBRM1	NM_181042.2	NM_181042.2		55193	93102368	NM_181042.2	PBRM1	NP_851385.1	ILMN_2385239	0004390020	A	7106	CGGGGGGACTGAGGGGAACCTGTAGGTTTAAAACAGTATGTTTGTCAGCC	3	-	52554715-52554764	3p21.1d	Homo sapiens polybromo 1 (PBRM1), transcript variant 4, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 11078522] [evidence NAS]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 11078522] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 11078522] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 11078522] [evidence NAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12368262] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15985610] [evidence IPI]	MGC156156; BAF180; MGC156155; PB1	BAF180
Homo sapiens	RefSeq	NM_181042.1	ILMN_16253	PBRM1	NM_181042.2	NM_181042.2		55193	93102368	NM_181042.2	PBRM1	NP_851385.1	ILMN_1659470	0001470072	A	4683	GCGCCTTCGAGATTTGATGCTCCGGGACACCCTCAACATTCGCCAAGCAT	3	-	52557138-52557187	3p21.1d	Homo sapiens polybromo 1 (PBRM1), transcript variant 4, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 11078522] [evidence NAS]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 11078522] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 11078522] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 11078522] [evidence NAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12368262] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15985610] [evidence IPI]	MGC156156; BAF180; MGC156155; PB1	BAF180
Homo sapiens	RefSeq	NM_018313.2	ILMN_16253	PBRM1	NM_181042.2	NM_181042.2		55193	93102368	NM_181042.2	PBRM1	NP_851385.1	ILMN_1723822	0000620338	I	4826	GGGGGGAAGGAACAAAGGAGGATAATTTTTATTGCATTTTACTGTACATC	3	-	52556995-52557044	3p21.1d	Homo sapiens polybromo 1 (PBRM1), transcript variant 4, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 11078522] [evidence NAS]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 11078522] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 11078522] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 11078522] [evidence NAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12368262] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15985610] [evidence IPI]	MGC156156; BAF180; MGC156155; PB1	BAF180
Homo sapiens	RefSeq	NM_030907.2	ILMN_19686	C1ORF89	NM_030907.2	NM_030907.2		79363	34147392	NM_030907.2	C1orf89	NP_112169.1	ILMN_1683990	0005670471	S	1198	TCCCGTGGCCTTTCCCCCTTTGGCAGCACCGATGGAGGATGACTGGGAGA	1	-	16430868-16430917	1p36.13f	Homo sapiens chromosome 1 open reading frame 89 (C1orf89), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RP4-733M16.4; MGC10731	RP4-733M16.4; MGC10731
Homo sapiens	Unigene	Hs.564301	ILMN_116991	HS.564301	Hs.564301		Hs.564301		19731771	BQ006871			ILMN_1818224	0002940133	S	596	AGGCCTCATGACCTAATCACCGCCCAAAGGTACCACCTCTCGATATTGGC					UI-H-EI1-azb-o-14-0-UI.s1 NCI_CGAP_EI1 Homo sapiens cDNA clone IMAGE:5846629 3, mRNA sequence					
Homo sapiens	RefSeq	NM_153047.1	ILMN_25662	FYN	NM_153047.1	NM_153047.1		2534	23510361	NM_153047.1	FYN	NP_694592.1	ILMN_1781207	0004860050	I	812	GTTGTGTCTGGAGAAGAAGCTGGGTCAGGGGTGTTTCGCTGAAGTGTGGC	6	-	112127413-112127462	6q21i	Homo sapiens FYN oncogene related to SRC, FGR, YES (FYN), transcript variant 2, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 15611048] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10858437] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15611048] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7822789] [evidence NAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 7822789] [evidence NAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 1361685] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [pmid 1361685] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [pmid 8264796] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [pmid 7722293] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 7822789] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14993658] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC45350; SYN; SLK	MGC45350; SYN; SLK
Homo sapiens	RefSeq	NM_002037.3	ILMN_25662	FYN	NM_153047.1	NM_153047.1		2534	23510361	NM_153047.1	FYN	NP_694592.1	ILMN_1686555	0000610164	A	1705	CAGCGGAACCGCCCAGGATCAGATTGCATGTGACTCTGAAGCTGACGAAC	6	-	112089496-112089545	6q21i	Homo sapiens FYN oncogene related to SRC, FGR, YES (FYN), transcript variant 2, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 15611048] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10858437] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15611048] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7822789] [evidence NAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 7822789] [evidence NAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 1361685] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [pmid 1361685] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [pmid 8264796] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [pmid 7722293] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 7822789] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14993658] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC45350; SYN; SLK	MGC45350; SYN; SLK
Homo sapiens	RefSeq	NM_001017916.1	ILMN_8373	CYB561	NM_001915.3	NM_001915.3		1534	63054827	NM_001915.3	CYB561	NP_001906.3	ILMN_1771179	0000130086	A	2646	CTTCAGGGGTAGGGGTGCCGTCAGTTCTTCAATCAGCTGGCACACACTTG	17	-	61509953-61510002	17q23.3a	Homo sapiens cytochrome b-561 (CYB561), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7980462] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: 2 Fe2+ + NAD+ = 2 Fe3+ + NADH + H+ [goid 293] [pmid 14499595] [evidence ISS]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [pmid 7980462] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FRRS2	FRRS2
Homo sapiens	RefSeq	NM_001915.3	ILMN_8373	CYB561	NM_001915.3	NM_001915.3		1534	63054827	NM_001915.3	CYB561	NP_001906.3	ILMN_1679721	0002480465	I	1	CACCGCCCAGCCCGCCGCCCGGTTGCCATGGCGACGCCGTCGCGCCACGG	17	-	61523672-61523721	17q23.3a	Homo sapiens cytochrome b-561 (CYB561), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7980462] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: 2 Fe2+ + NAD+ = 2 Fe3+ + NADH + H+ [goid 293] [pmid 14499595] [evidence ISS]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [pmid 7980462] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FRRS2	FRRS2
Homo sapiens	RefSeq	NM_007011.4	ILMN_25020	ABHD2	NM_152924.3	NM_152924.3		11057	93141022	NM_152924.3	ABHD2	NP_690888.1	ILMN_1723662	0006900475	A	1860	ACACCATCAGCAGGGGGCACCCACCATGCACACCTGTCTCGGAGTAGGCA	15	+	87539764-87539813	15q26.1a	Homo sapiens abhydrolase domain containing 2 (ABHD2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HS1-2; PHPS1-2; MGC111112; LABH2; MGC26249	HS1-2; PHPS1-2; MGC111112; LABH2; MGC26249
Homo sapiens	RefSeq	NM_152924.3	ILMN_25020	ABHD2	NM_152924.3	NM_152924.3		11057	93141022	NM_152924.3	ABHD2	NP_690888.1	ILMN_2403446	0002970201	A	1842	TGACCTGGATCTGACCTCACACCATCAGCAGGGGGCACCCACCATGCACA	15	+	87539746-87539795	15q26.1a	Homo sapiens abhydrolase domain containing 2 (ABHD2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HS1-2; PHPS1-2; MGC111112; LABH2; MGC26249	HS1-2; PHPS1-2; MGC111112; LABH2; MGC26249
Homo sapiens	RefSeq	XM_933344.1	ILMN_36745	LOC646026	XM_933344.1	XM_933344.1		646026	89041754	XM_933344.1	LOC646026	XP_938437.1	ILMN_1684987	0000130575	S	96	CTTTCCCCGCAAGGGTCAAGAGGGAGTGGGGGATGGTGGGAAGGCAATCT	17	-	60208411-60208429:60208430-60208460		PREDICTED: Homo sapiens similar to hypothetical protein MGC40489 (LOC646026), mRNA.					
Homo sapiens	RefSeq	NM_199327.1	ILMN_166735	LOC730525	XM_001126202.1	XM_001126202.1		730525	113416236	XM_001126202.1	LOC730525	XP_001126202.1	ILMN_1651610	0000730709	I	58	GCCCTGGATAAGGAACAGCTACAGTCGCTGTTAAATGTGCCTGAAAAGCA					PREDICTED: Homo sapiens hypothetical protein LOC730525 (LOC730525), mRNA.					hSPRY1
Homo sapiens	RefSeq	XM_940582.1	ILMN_164051	LOC651430	XM_001127939.1	XM_001127939.1		651430	113415911	XM_001127939.1	LOC651430	XP_001127939.1	ILMN_1653760	0001690538	S	628	GCCCCAGTGCTGACCCCAGCCCCTTTTCCACGCTCGATGCTTCTTACAAA	4	-	187348961-187349010	4q35.2a	PREDICTED: Homo sapiens hypothetical LOC651430 (LOC651430), mRNA.					
Homo sapiens	RefSeq	NM_001033661.1	ILMN_27259	C4ORF11	NM_001033661.1	NM_001033661.1		439934	75905492	NM_001033661.1	C4orf11	NP_001028833.1	ILMN_1755519	0003170709	S	633	TGGACTCTGGGACTTGCACCAGCGGCTTCCCAAGGGTTCTCAGGCCTTAA	4	-	83753455-83753504	4q21.22a	Homo sapiens chromosome 4 open reading frame 11 (C4orf11), mRNA.					
Homo sapiens	RefSeq	NR_030193.1	ILMN_387848	MIR523	NR_030193.1	NR_030193.1		574471	262205309	NR_030193.1	MIR523		ILMN_3308585	0002350152	S	5	TGCTGTGACCCTCTAGAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGAA				19q13.41b	Homo sapiens microRNA 523 (MIR523), microRNA.					
Homo sapiens	RefSeq	XM_001719758.1	ILMN_342772	ZNF66	XM_001719758.1	XM_001719758.1		7617	169213608	XM_001719758.1	ZNF66	XP_001719810.1	ILMN_3232303	0005910435	I	3070	TGCCACCCACTCGTTCACCGCAGTAGTAATCTGTTCACTGTCAGCCACTC	19	+	20878109-20878158	19p12d	PREDICTED: Homo sapiens zinc finger protein 66 (ZNF66), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_203315.1	ILMN_5894	BDH1	NM_203315.2	NM_203315.2		622	82880651	NM_203315.2	BDH1	NP_976060.1	ILMN_1677637	0005290553	I	93	GCCTGGAGAGGATCCTGCATGCTGATAGTGCTGAGGCACCTGCCAGCTAA	3	-	198784449-198784498	3q29h	Homo sapiens 3-hydroxybutyrate dehydrogenase, type 1 (BDH1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 1639787] [evidence EXP]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [pmid 92348395] [evidence TAS]; Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [pmid 1639787] [evidence EXP]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	BDH; MGC4347; MGC2723; MGC9788	MGC4347; MGC9788; MGC2723
Homo sapiens	RefSeq	NM_015079.2	ILMN_14085	TBC1D2B	NM_015079.2	NM_015079.2		23102	40018619	NM_015079.2	TBC1D2B	NP_055894.3	ILMN_2064606	0002850039	S	5486	GCCGCCAAGACTGCTGACAGCTGGAGACGGTTCTGGTTTCAACTACGGTA	15	-	76074724-76074773	15q24.3b-q25.1a	Homo sapiens TBC1 domain family, member 2B (TBC1D2B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	KIAA1055; FLJ20166	KIAA1055; FLJ20166
Homo sapiens	Unigene	Hs.576241	ILMN_128422	HS.576241	Hs.576241		Hs.576241		27469781	BC042085			ILMN_1842305	0007550661	S	1930	GCAAAGAAGGGAGAGGCTATAACATGGTGGCACTAGAATAAGACTGCCGG	18	-	13409604-13409653		Homo sapiens, clone IMAGE:5752728, mRNA					
Homo sapiens	RefSeq	XM_496726.2	ILMN_33228	LOC285500	XM_496726.2	XM_496726.2		285500	88978285	XM_496726.2	LOC285500	XP_496726.2	ILMN_1786838	0000240681	A	2042	TGGTTGTGTGGCCCTCGTTGCCCTATTGCACTTTTGATAATATTTGCCTG	4	+	178835161-178835210		PREDICTED: Homo sapiens hypothetical protein LOC285500 (LOC285500), mRNA.					
Homo sapiens	RefSeq	NM_001033555.1	ILMN_25100	CYTSB	NM_001033555.1	NM_001033555.1		92521	75750473	NM_001033555.1	CYTSB	NP_001028727.1	ILMN_3255061	0004900593	M	3468	CCCGGCTTTGCCTTTATGAAACCTTTGCCCTTGGCTGGGTGTGGTAGCTC	17	+	20108160-20108209	17p11.2d-p11.2c	Homo sapiens cytospin B (CYTSB), transcript variant NSP5alpha3beta, mRNA.				HCMOGT-1; NSP; FLJ36955	HCMOGT-1; NSP; FLJ36955
Homo sapiens	RefSeq	Hs.576599	ILMN_27204	C10ORF76	NM_024541.2	NM_024541.2		79591	154350212	NM_024541.2	C10orf76	NP_078817.2	ILMN_1838791	0006580554	S	401	GCATTGACAACCCGAATTGGATGCTCCTCTCCCAGAGCCTGGATGCAGTG	10	-	103792831-103792880	10q24.32a	Homo sapiens chromosome 10 open reading frame 76 (C10orf76), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC125927; FLJ13114; RP11-190J1.9	
Homo sapiens	RefSeq	NM_024541.1	ILMN_27204	C10ORF76	NM_024541.2	NM_024541.2		79591	154350212	NM_024541.2	C10orf76	NP_078817.2	ILMN_1792110	0000730593	S	3773	GCAGGAATTCAGCAGTGAGAGCATGTCTGGGACCACCTGGACTGCCATCC	10	-	103649191-103649240	10q24.32a	Homo sapiens chromosome 10 open reading frame 76 (C10orf76), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC125927; FLJ13114; RP11-190J1.9	MGC125927; RP11-190J1.9; FLJ13114
Homo sapiens	RefSeq	NM_001032391.1	ILMN_17037	LCMT1	NM_001032391.1	NM_001032391.1		51451	74048544	NM_001032391.1	LCMT1	NP_001027563.1	ILMN_2336186	0003930376	A	614	GCAGTCCGCAAACCTCCTGAAGTGGGCAGCCAACAGTTTTGAGAGAGCCA	16	+	25083471-25083520	16p12.1b	Homo sapiens leucine carboxyl methyltransferase 1 (LCMT1), transcript variant 2, mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10600115] [evidence TAS]; The methylation of the C-terminal amino acid of a protein [goid 6481] [pmid 10600115] [evidence IDA]	Catalysis of the transfer of a methyl group to the carbon atom of the C-terminal residue of a protein [goid 3880] [pmid 10600115] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a substrate [goid 8757] [pmid 10600115] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]	LCMT; PPMT1; CGI-68	LCMT; PPMT1; CGI-68
Homo sapiens	RefSeq	XM_938568.1	ILMN_34075	LOC388885	XM_938568.1	XM_938568.1		388885	89059227	XM_938568.1	LOC388885	XP_943661.1	ILMN_1698291	0001110181	A	97	ATTAACCACGTCTCAAGAAAAAAGGACGTTCCGTCCGCCTCGGGCGCCGG				22q11.23b	PREDICTED: Homo sapiens similar to 40S ribosomal protein S10 (LOC388885), mRNA.					
Homo sapiens	RefSeq	NM_001008393.1	ILMN_20795	LOC201725	NM_001008393.1	NM_001008393.1		201725	56606124	NM_001008393.1	LOC201725	NP_001008394.1	ILMN_1792712	0004730397	S	3212	TCCTGATACCAAGATGAGAAGATGGCTCTAATCAGCTGAGACAGCACCAG	4	-	159807520-159807569	4q32.1e	Homo sapiens hypothetical protein LOC201725 (LOC201725), mRNA.					
Homo sapiens	RefSeq	XR_038720.1	ILMN_352268	LOC100132528	XR_038720.1	XR_038720.1		100132528	169179995	XR_038720.1	LOC100132528		ILMN_3219197	0006330670	A	761	GGTGGAGGATGCAGCCATGAATGCAAGGCCACACAAGGTGAACAGAAGAC				9q22.1b	PREDICTED: Homo sapiens misc_RNA (LOC100132528), miscRNA.					
Homo sapiens	RefSeq	XR_038720.1	ILMN_352268	LOC100132528	XR_038720.1	XR_038720.1		100132528	169179995	XR_038720.1	LOC100132528		ILMN_3234436	0004760754	I	1166	GTGGTGGTCGTGGAGGTGGTTTCAGTGGGAATGACAACTCTGGTAGTGGA				9q22.1b	PREDICTED: Homo sapiens misc_RNA (LOC100132528), miscRNA.					
Homo sapiens	RefSeq	NM_006408.3	ILMN_370920	AGR2	NM_006408.3	NM_006408.3		10551	219521822	NM_006408.3	AGR2	NP_006399.1	ILMN_3307841	0001340021	S	749	GGCCTTGAGACTTGAAACCAGAAGAAGTGTGAGAAGACTGGCTAGTGTGG	7	-	16832448-16832497	7p21.1b	Homo sapiens anterior gradient homolog 2 (Xenopus laevis) (AGR2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]				
Homo sapiens	RefSeq	NR_031729.1	ILMN_388646	MIR1908	NR_031729.1	NR_031729.1		100302263	269847624	NR_031729.1	MIR1908		ILMN_3308622	0005260292	S	3	GAATGCCGCGGCGGGGACGGCGATTGGTCCGTATGTGTGGTGCCACCGGC					Homo sapiens microRNA 1908 (MIR1908), microRNA.					
Homo sapiens	RefSeq	NM_022436.2	ILMN_20060	ABCG5	NM_022436.2	NM_022436.2		64240	14141174	NM_022436.2	ABCG5	NP_071881.1	ILMN_1716592	0006290575	S	2573	TCCTGGAAGACCCAGAGTTAAATGCAGATGTCCACACGAGGGGTCGGAGT	2	-	44039728-44039777	2p21d	Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 5 (ABCG5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Uptake of cholesterol into the blood by absorption from the small intestine [goid 30299] [pmid 11138003] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16870176] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	STSL; sterolin 1	STSL; sterolin 1
Homo sapiens	RefSeq	NM_005413.1	ILMN_26476	SIX3	NM_005413.1	NM_005413.1		6496	4885596	NM_005413.1	SIX3	NP_005404.1	ILMN_1799076	0001570246	S	1507	GATACCCAACCATACACACATACAAGTCCACACACACTCCCACCCCAGCC	2	+	45025528-45025577	2p21c	Homo sapiens sine oculis homeobox homolog 3 (Drosophila) (SIX3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10369266] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10369266] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HPE2	HPE2
Homo sapiens	Unigene	Hs.559714	ILMN_113805	HS.559714	Hs.559714		Hs.559714		50486975	CR606168			ILMN_1859657	0005290653	S	860	CGGGATCTGGCTCCGGATGTGCTCATTGCTACTGGGGTGTCATTGCAGCT	1	+	1813912-1813961		full-length cDNA clone CS0DJ011YN13 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human)					
Homo sapiens	RefSeq	NM_174881.2	ILMN_23637	CRB3	NM_174881.2	NM_174881.2		92359	83281436	NM_174881.2	CRB3	NP_777377.1	ILMN_2405680	0004670402	A	310	TGTTTTGCCTTCATCCACCAGCTCCAGCTCCGATGGCAACCTGCGTCCAG	19	+	6416587-6416629:6417477-6417483	19p13.3a	Homo sapiens crumbs homolog 3 (Drosophila) (CRB3), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]				
Homo sapiens	RefSeq	XR_042325.1	ILMN_350796	LOC100130775	XR_042325.1	XR_042325.1		100130775	169203833	XR_042325.1	LOC100130775		ILMN_3271244	0004570301	M	34	TCAGGAGAGAAGAAGAGGAAACACAAGAGGAAACGCCTGGTGCAGAGCCC	12	+	100342383-100342432	12q23.2a	PREDICTED: Homo sapiens misc_RNA (LOC100130775), miscRNA.					
Homo sapiens	RefSeq	XM_929546.1	ILMN_41265	LOC646609	XM_929546.1	XM_929546.1		646609	89029207	XM_929546.1	LOC646609	XP_934639.1	ILMN_1669605	0003190195	S	504	TGCATACAGTAGGGATGAGTTCACCAGTACCTGTCCCAGTGATGAGGAGG	9	+	22738140-22738189	9p21.3b	PREDICTED: Homo sapiens similar to Chloride intracellular channel protein 4 (Intracellular chloride ion channel protein p64H1) (LOC646609), mRNA.					
Homo sapiens	RefSeq	NM_006739.2	ILMN_20107	MCM5	NM_006739.3	NM_006739.3		4174	143770796	NM_006739.3	MCM5	NP_006730.2	ILMN_1815169	0007330253	S	2182	GGACTTCACCAAGCAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGC	22	+	34149319-34149334:34150147-34150180	22q12.3c	Homo sapiens minichromosome maintenance complex component 5 (MCM5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8751386] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10846177] [evidence EXP]	The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8751386] [evidence TAS]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC5315; CDC46; P1-CDC46	MGC5315; CDC46; P1-CDC46
Homo sapiens	RefSeq	NM_015047.1	ILMN_24820	KIAA0090	NM_015047.1	NM_015047.1		23065	22095330	NM_015047.1	KIAA0090	NP_055862.1	ILMN_2153280	0006660047	S	4169	AGTAGACCATCTCTAGCCCTGTGGTGAAAGAGGTACACTCGAATGTTTGC	1	-	19544603-19544652	1p36.13b	Homo sapiens KIAA0090 (KIAA0090), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	RP1-43E13.1	RP1-43E13.1
Homo sapiens	RefSeq	NM_005980.2	ILMN_23476	S100P	NM_005980.2	NM_005980.2		6286	45827727	NM_005980.2	S100P	NP_005971.1	ILMN_1801216	0001510424	S	378	AATGATGCCCTGGAGATGTCACAGATTCCTGGCAGAGCCATGGTCCCAGG	4	+	6698765-6698769:6698770-6698814	4p16.1f	Homo sapiens S100 calcium binding protein P (S100P), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15632002] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15632002] [evidence TAS]	The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [pmid 15313892] [evidence IMP]	Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 15632002] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 1633809] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 15632002] [evidence IPI]	MIG9	MIG9
Homo sapiens	RefSeq	NM_001123041.2	ILMN_356958	CCR2	NM_001123041.2	NM_001123041.2		729230	183979979	NM_001123041.2	CCR2	NP_001116513.2	ILMN_3232921	0006650524	I	2624	TTTTAACAACTATGATTTGGAAAATAAATCAATGCTATAACTATGTTGAA	3	+	46402365-46402413	3p21.31i	Homo sapiens chemokine (C-C motif) receptor 2 (CCR2), transcript variant A, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8995400] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15995708] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15995708] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8146186] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10623817] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10623817] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10751368] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10201901] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 8995400] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9548499] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9670957] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15995708] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Interacting selectively with a CCR2 chemokine receptor [goid 31727] [pmid 15995708] [evidence IDA]		
Homo sapiens	RefSeq	NM_001123041.2	ILMN_356958	CCR2	NM_001123041.2	NM_001123041.2		729230	183979979	NM_001123041.2	CCR2	NP_001116513.2	ILMN_3188479	0002140577	A	110	GAAGCTCAGAGTCGTTAGAAACAGGAGCAGATGTACAGGGTTTGCCTGAC	3	+	46395344-46395393	3p21.31i	Homo sapiens chemokine (C-C motif) receptor 2 (CCR2), transcript variant A, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8995400] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15995708] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15995708] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8146186] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10623817] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10623817] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10751368] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10201901] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 8995400] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9548499] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9670957] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15995708] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Interacting selectively with a CCR2 chemokine receptor [goid 31727] [pmid 15995708] [evidence IDA]		
Homo sapiens	RefSeq	NM_001004335.1	ILMN_25150	FLJ42842	NM_001004335.1	NM_001004335.1		440446	51972241	NM_001004335.1	FLJ42842	NP_001004335.1	ILMN_1657378	0002810598	S	2318	TCCCTTCGCCTCTGGATGAGAAAAAAGAGGGACAGTACCCATGAGGCCCC	17	+	46774604-46774653	17q21.33c	Homo sapiens FLJ42842 protein (FLJ42842), mRNA.					
Homo sapiens	RefSeq	NM_018182.1	ILMN_173887	C17ORF63	NM_001077498.1	NM_001077498.1		55731	117306173	NM_001077498.1	C17orf63	NP_001070966.1	ILMN_1812441	0005570224	S	3025	CCCTCCTGCCCTCTGTCCATTCTTAGAGCATACCTTCATCCACTCCATGC	17	-	27084084-27084133	17q11.2a	Homo sapiens chromosome 17 open reading frame 63 (C17orf63), transcript variant 1, mRNA.				FLJ10700	FLJ10700
Homo sapiens	RefSeq	NM_001136509.1	ILMN_372131	ZNF843	NM_001136509.1	NM_001136509.1		283933	211059440	NM_001136509.1	ZNF843	NP_001129981.1	ILMN_3249372	0007610093	S	61	GCGAGAGGCAAGCAGGGCGGGCTGGATACGGAGCGCCCTATGACTGAGGT	16	-	31454238-31454287	16p11.2c	Homo sapiens zinc finger protein 843 (ZNF843), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_173078.2	ILMN_12273	SLITRK4	NM_173078.2	NM_173078.2		139065	40217821	NM_173078.2	SLITRK4	NP_775101.1	ILMN_2199768	0007330477	S	2984	GCATGGAGGCAGGTGTTTCCAAGGGTGTCTCATTAACTGTAGCTGCAAAG	X	-	142716267-142716316	Xq27.3a	Homo sapiens SLIT and NTRK-like family, member 4 (SLITRK4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp547M2010	DKFZp547M2010
Homo sapiens	RefSeq	NM_001013649.1	ILMN_138621	LOC388969	NM_001013649.1	NM_001013649.1		388969	61966752	NM_001013649.1	LOC388969	NP_001013671.1	ILMN_1679771	0004390037	S	1539	CTACTGTGTGACAGGATTGTGCTGGCCTCAGAGCAGGGATGCAAAGGTAA	2	-	85690987-85691036	2p11.2f	Homo sapiens hypothetical LOC388969 (LOC388969), mRNA.				FLJ14112	FLJ14112
Homo sapiens	RefSeq	XM_943585.1	ILMN_39501	LOC647946	XM_943585.1	XM_943585.1		647946	89047386	XM_943585.1	LOC647946	XP_948678.1	ILMN_1656767	0004830215	I	432	TTCATTTGGGAGCAAGGAGAACTGGGTTCTCATTCTTCAGCCAATGAGCT					PREDICTED: Homo sapiens hypothetical protein LOC647945, transcript variant 2 (LOC647946), mRNA.					
Homo sapiens	RefSeq	XR_040874.1	ILMN_349037	MGC12538	XR_040874.1	XR_040874.1		84832	169161885	XR_040874.1	MGC12538		ILMN_3304802	0003190168	M	2014	AGGTCCATGACCTGTTAGGAACCAGCTGCACAGCAGGAGAGTTACTGTGG				1q24.2a	PREDICTED: Homo sapiens misc_RNA (MGC12538), miscRNA.					
Homo sapiens	Unigene	Hs.555512	ILMN_112300	HS.555512	Hs.555512		Hs.555512		3896314	AI274046			ILMN_1906579	0003120433	S	221	GCTATGATTAGTGTAAGTGTGCATGTTTTACGTTGGTGTCATTGAAGAGC	14	+	53475748-53475797		ql57c09.x1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1876432 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020388.2	ILMN_22870	DST	NM_020388.3	NM_020388.3		667	148613861	NM_020388.3	DST	NP_065121.2	ILMN_1665873	0003180685	I	9234	GGAATGTACTTCAGGGTCTAAAGAGATGGCTTCTGGAGATAGCTCAACCG	6	-	56576598-56576647	6p12.1a	Homo sapiens dystonin (DST), transcript variant 1eB, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IEA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IEA]; Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [pmid 2461961] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8575775] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11751855] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 14581450] [evidence IDA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [pmid 11375975] [evidence TAS]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [pmid 8575775] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IEA]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 10428034] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11375975] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 8575775] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [pmid 11375975] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [pmid 11751855] [evidence IEP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 11375975] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11375975] [evidence IPI]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 8575775] [evidence ISS]	CATX-15; KIAA0465; KIAA1470; D6S1101; DMH; BPA; BP240; MACF2; BPAG1; DKFZp564B2416; FLJ46791	CATX-15; KIAA0465; D6S1101; DMH; BP240; MACF2; BPAG1; KIAA1470; BPA; FLJ46791
Homo sapiens	RefSeq	XM_937942.1	ILMN_33916	LOC648863	XM_937942.1	XM_937942.1		648863	89025969	XM_937942.1	LOC648863	XP_943035.1	ILMN_1705330	0004640136	S	217	CCACAAACAGATGTATGTCTAGTCTGTTTTTCAGTGGTCTCTCCGTCTTC					PREDICTED: Homo sapiens similar to cell division cycle 42 (LOC648863), mRNA.					
Homo sapiens	RefSeq	XR_038026.1	ILMN_336004	LOC441131	XR_038026.1	XR_038026.1		441131	169169744	XR_038026.1	LOC441131		ILMN_3200414	0003870184	A	538	GGGAGCCTGGGCAGCCACCATCTCCAGAGCCCTGGGCAGCATTTTCCATT				6p22.3f	PREDICTED: Homo sapiens misc_RNA (LOC441131), miscRNA.					
Homo sapiens	RefSeq	NM_001009613.1	ILMN_14909	SPANXN4	NM_001009613.2	NM_001009613.2		441525	148806897	NM_001009613.2	SPANXN4	NP_001009613.1	ILMN_1808463	0002480082	S	307	CCAGCCTACAGAGAGCTCCACTGATCCAATCAAAGAGAAAGGAGACCTAG	X	+	141949608-141949657	Xq27.3a	Homo sapiens SPANX family, member N4 (SPANXN4), mRNA.				SPANX-N4	SPANX-N4
Homo sapiens	RefSeq	XR_038928.1	ILMN_343558	LOC100128519	XR_038928.1	XR_038928.1		100128519	169166596	XR_038928.1	LOC100128519		ILMN_3262895	0002490528	M	1007	CGTCACCCACATTGGAGTGCGGTGGTATGATCTCAGCTCACCAAACCTCC				4p16.1c	PREDICTED: Homo sapiens misc_RNA (LOC100128519), miscRNA.					
Homo sapiens	RefSeq	XR_038928.1	ILMN_343558	LOC100128519	XR_038928.1	XR_038928.1		100128519	169166596	XR_038928.1	LOC100128519		ILMN_3186437	0000020743	A	388	CTTGCAAGACACGGCTGGCATGAGAAGAAGATGACCTCAAGAAAACAGCA				4p16.1c	PREDICTED: Homo sapiens misc_RNA (LOC100128519), miscRNA.					
Homo sapiens	RefSeq	XR_039227.1	ILMN_337366	LOC100129482	XR_039227.1	XR_039227.1		100129482	169190408	XR_039227.1	LOC100129482		ILMN_3255741	0004070653	M	2315	GCCACACCTCAGTAAACATCAGAGAGTTCACACAGGGTGAAACCTGGCTC	10	-	42334851-42334900	10q11.21a	PREDICTED: Homo sapiens misc_RNA (LOC100129482), miscRNA.					
Homo sapiens	Unigene	Hs.137216	ILMN_77798	HS.137216	Hs.137216		Hs.137216		3917451	AI279217			ILMN_1900615	0002470471	S	335	CCGGGATAGTTGCATCATGTTAGGTGGAGCTACTGCCTTGCTTGGGGCTT	2	-	131240066-131240115		qm24d05.x1 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGE:1882761 3, mRNA sequence					
Homo sapiens	RefSeq	NM_173800.4	ILMN_366222	LVRN	NM_173800.4	NM_173800.4		206338	194239712	NM_173800.4	LVRN	NP_776161.3	ILMN_3246826	0004250477	S	3885	TGTGTATTCACCAGTGGGATGGACACCCTTTCAGCCTAAGCGTACGAGTG	5	+	115362563-115362612	5q23.1a	Homo sapiens laeverin (LVRN), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_018640.3	ILMN_15180	LMO3	NM_018640.3	NM_018640.3		55885	41350202	NM_018640.3	LMO3	NP_061110.2	ILMN_1764231	0002120240	I	372	CGCTACAAAGCAGCCACTGTGCTTACTGAACGGCCTCCCCCTGTATCGCT	12	-	16759010-16759059	12p12.3d	Homo sapiens LIM domain only 3 (rhombotin-like 2) (LMO3), transcript variant 1, mRNA.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RHOM3; Rhom-3; RBTNL2; RBTN3; DAT1; MGC26081	RHOM3; Rhom-3; RBTNL2; RBTN3; DAT1; MGC26081
Homo sapiens	RefSeq	NM_018640.3	ILMN_15180	LMO3	NM_018640.3	NM_018640.3		55885	41350202	NM_018640.3	LMO3	NP_061110.2	ILMN_1813295	0005360301	A	3451	GCCCTAACGTCATTTAGCTTGTTGTCTGATGCCTCCAGTAGGACACCTCC	12	-	16701533-16701582	12p12.3d	Homo sapiens LIM domain only 3 (rhombotin-like 2) (LMO3), transcript variant 1, mRNA.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RHOM3; Rhom-3; RBTNL2; RBTN3; DAT1; MGC26081	RHOM3; Rhom-3; RBTNL2; RBTN3; DAT1; MGC26081
Homo sapiens	Unigene	Hs.519298	ILMN_99580	HS.519298	Hs.519298		Hs.519298		9139432	BE265759			ILMN_1861556	0003400689	S	562	GTCCTCAGGGTCAGGGGGACAACAGAGGCAGAGACTTGGGAAGGACGAAT					601193780F1 NIH_MGC_7 Homo sapiens cDNA clone IMAGE:3537666 5, mRNA sequence					
Homo sapiens	RefSeq	XM_929316.1	ILMN_45333	LOC391771	XM_929316.1	XM_929316.1		391771	88982562	XM_929316.1	LOC391771	XP_934409.1	ILMN_1656720	0007570594	S	1	ATGGTGGAAACCTTGGGTACAGTACTACAACTCAAGCATCCCCTTAACAC	5	-	23340554-23340603	5p14.2a	PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, non-receptor type 11 (LOC391771), mRNA.					
Homo sapiens	RefSeq	NM_203423.1	ILMN_4719	LOC389199	NM_203423.1	NM_203423.1		389199	44662802	NM_203423.1	LOC389199	NP_981968.1	ILMN_1787063	0001110079	S	1186	ACAGAAAGGGAAACTGAGGTCCAAGGAATAGGATTGCCTGCCGCTCGAAG	4	+	7992813-7992862	4p16.1d	Homo sapiens hypothetical gene supported by BC031673 (LOC389199), mRNA.				MGC35057	MGC35057
Homo sapiens	RefSeq	NM_005826.3	ILMN_4888	HNRNPR	NM_005826.3	NM_005826.3		10236	156151390	NM_005826.3	HNRNPR	NP_005817.1	ILMN_3177285	0003060035	A	2245	TGCTCTTGGACATTATTGGGCTTGCAGAGTTCCCTTATTCTGGGGATTAC	1	-	23636713-23636762	1p36.12a	Homo sapiens heterogeneous nuclear ribonucleoprotein R (HNRNPR), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9421497] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 9421497] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9421497] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	HNRPR; hnRNP-R; FLJ25714	hnRNP-R; FLJ25714; HNRNPR
Homo sapiens	Unigene	Hs.542897	ILMN_106596	HS.542897	Hs.542897		Hs.542897		6037816	AW082664			ILMN_1867705	0004290274	S	189	AGACTCTGTGTGTCTCTGTGTTTGACGTGGGGAGGGCCGATGCTTCCCTG	3	+	161161405-161161454		xb61a11.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2580764 3, mRNA sequence					
Homo sapiens	RefSeq	XM_941109.1	ILMN_175051	GRXCR1	NM_001080476.1	NM_001080476.1		389207	122937348	NM_001080476.1	GRXCR1	NP_001073945.1	ILMN_1793305	0005870463	A	711	TGAGTGTCCCTCTTGTGGAGGCTTTGGCTTTCTTCCATGCTCCGTGTGCC	4	+	42727152-42727201	4p13c	Homo sapiens glutaredoxin, cysteine rich 1 (GRXCR1), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Homo sapiens	RefSeq	NM_194284.1	ILMN_14304	CLDN23	NM_194284.2	NM_194284.2		137075	124107615	NM_194284.2	CLDN23	NP_919260.2	ILMN_1725338	0001850156	S	1798	TGCTGTACTATTCCACCCTTTGGACGCCTCATCCAGGACGCAGAGGACTC	8	+	8561463-8561512	8p23.1d	Homo sapiens claudin 23 (CLDN23), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	CLDNL; hCG1646163	CLDNL
Homo sapiens	RefSeq	NM_001080431.1	ILMN_168340	SLC45A4	NM_001080431.1	NM_001080431.1		57210	122937258	NM_001080431.1	SLC45A4	NP_001073900.1	ILMN_2391976	0007150753	A	3051	TGCGAAGGGGACATGCGTGCTGGAACCTGTCGGAACTCCATGCCTTCCTC	8	-	142290327-142290376	8q24.3c	Homo sapiens solute carrier family 45, member 4 (SLC45A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		KIAA1126	KIAA1126
Homo sapiens	RefSeq	XM_001722777.1	ILMN_349593	LOC100131836	XM_001722777.1	XM_001722777.1		100131836	169166676	XM_001722777.1	LOC100131836	XP_001722829.1	ILMN_3292528	0002100674	M	1340	TGGAAAAATGGACCTGTGGAGAGGAGCTAACCACTCCAGGGTCACCTCTC				4p15.31b	PREDICTED: Homo sapiens hypothetical LOC100131836 (LOC100131836), mRNA.					
Homo sapiens	Unigene	Hs.571028	ILMN_123209	HS.571028	Hs.571028		Hs.571028		47284836	CN268422			ILMN_1888074	0005670132	S	563	TGTCTGGTGCTGTGTCAACTGGGCCTGCCTCTGGGATAGTGTTGTGGCTG	5	+	180553000-180553049		17000531973183 GRN_ES Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NR_030618.1	ILMN_388138	MIR873	NR_030618.1	NR_030618.1		100126316	262206155	NR_030618.1	MIR873		ILMN_3310735	0006180685	S	24	GTCTCCTATTGAAAATGAACAGGAGACTGATGAGTTCCCGGGAACACCCA				9p21.1d	Homo sapiens microRNA 873 (MIR873), microRNA.					
Homo sapiens	RefSeq	NM_033645.2	ILMN_11037	FBXW11	NM_033645.2	NM_033645.2		23291	48928047	NM_033645.2	FBXW11	NP_387449.2	ILMN_2394571	0003460711	A	3969	CCCCTCGTTCCTTGGGAGATGATGGCCTTTGAATATGCAGACAACCTTTG	5	-	171289426-171289475	5q35.1d-q35.1e	Homo sapiens F-box and WD repeat domain containing 11 (FBXW11), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15070733] [evidence IPI]	BTRC2; FBW1B; KIAA0696; BTRCP2; Fbw11; FBXW1B; Hos	BTRC2; FBW1B; KIAA0696; BTRCP2; Fbw11; FBXW1B; Hos
Homo sapiens	RefSeq	NM_033645.2	ILMN_11037	FBXW11	NM_033645.2	NM_033645.2		23291	48928047	NM_033645.2	FBXW11	NP_387449.2	ILMN_2394576	0000510253	A	3326	CCCCAGCAGGTTCTCAAAGCTCCCAAGTCCTCCCTACGACACAGCCCAAA	5	-	171290069-171290118	5q35.1d-q35.1e	Homo sapiens F-box and WD repeat domain containing 11 (FBXW11), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15070733] [evidence IPI]	BTRC2; FBW1B; KIAA0696; BTRCP2; Fbw11; FBXW1B; Hos	BTRC2; FBW1B; KIAA0696; BTRCP2; Fbw11; FBXW1B; Hos
Homo sapiens	RefSeq	NM_025213.1	ILMN_15909	SPTBN4	NM_020971.2	NM_020971.2		57731	115430236	NM_020971.2	SPTBN4	NP_066022.2	ILMN_1706548	0000540022	A	8327	CCCTGCACTCCGCCGCCTCAGAGCCATGCGGTTAATTCCTGACTTAGTTT	19	+	41082005-41082054	19q13.2b	Homo sapiens spectrin, beta, non-erythrocytic 4 (SPTBN4), transcript variant sigma1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11294830] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [pmid 11086001] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11294830] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 11294830] [evidence IDA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 11086001] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 11294830] [evidence TAS]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11086001] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 11294830] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with ankyrin, a 200 kDa cytoskeletal protein that attaches other cytoskeletal proteins to integral membrane proteins [goid 30506] [pmid 11294830] [evidence IDA]	KIAA1642; SPNB4; QV; SPTBN3	KIAA1642; QV; SPTBN3
Homo sapiens	RefSeq	NM_001001890.1	ILMN_14303	RUNX1	NM_001001890.1	NM_001001890.1		861	49574545	NM_001001890.1	RUNX1	NP_001001890.1	ILMN_1669335	0007050278	I	1498	AGCTGCTTGCTGAAGATCCGCGCCCCTGTCGCCGTCTGGTAGGAGCTGTT	21	-	35181310-35181359	21q22.12a	Homo sapiens runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene) (RUNX1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9199349] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7862156] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8622955] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [pmid 11742995] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of granulocyte differentiation [goid 30853] [pmid 9199349] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of granulocyte differentiation [goid 30854] [pmid 9199349] [evidence IMP]; The stages of blood cell formation that take place within the embryo [goid 35162] [evidence IEA]; Any process that activates or increases angiogenesis [goid 45766] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 9199349] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 11742995] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 14970218] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 10207087] [evidence IDA]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8413232] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8565077] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9199349] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 14970218] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 12217689] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10207087] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11965546] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14970218] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10207087] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9751710] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 9199349] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10207087] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 14970218] [evidence IDA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10856244] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 8413232] [evidence IDA]; Interacting selectively with water (H2O) [goid 50824] [pmid 12217689] [evidence IDA]	AMLCR1; PEBP2aB; PEBP2A2; EVI-1; CBFA2; AML1; AML1-EVI-1	AMLCR1; PEBP2aB; PEBP2A2; EVI-1; CBFA2; AML1; AML1-EVI-1
Homo sapiens	RefSeq	XM_001724757.1	ILMN_344592	LOC100129083	XM_001724757.1	XM_001724757.1		100129083	169214403	XM_001724757.1	LOC100129083	XP_001724809.2	ILMN_3187554	0003460674	A	840	CCCACTCACCGCCCAGCAGCGAGGACAGCAGCAGTGGCAGTAGCATCTCC				19q13.33d	PREDICTED: Homo sapiens similar to hCG2045285 (LOC100129083), mRNA.					
Homo sapiens	RefSeq	XM_936910.1	ILMN_40686	LOC647850	XM_936910.1	XM_936910.1		647850	88998851	XM_936910.1	LOC647850	XP_942003.1	ILMN_1690463	0006220138	S	1176	CAATCAGGCTTCCTCCAATGCGCCACAGACAGGATCGTGCGGCTCACCTT					PREDICTED: Homo sapiens hypothetical LOC647850 (LOC647850), mRNA.					
Homo sapiens	RefSeq	NM_173662.1	ILMN_29145	RNF175	NM_173662.2	NM_173662.2		285533	148664182	NM_173662.2	RNF175	NP_775933.1	ILMN_1741281	0002600296	S	1344	CACTAGGGCTGGAATAGGACAGCAGACCCCAGAAGCAACATACTGCATGG	4	-	154850937-154850970:154850971-154850986	4q31.3d	Homo sapiens ring finger protein 175 (RNF175), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ34190	FLJ34190
Homo sapiens	Unigene	Hs.224678	ILMN_82610	HS.224678	Hs.224678		Hs.224678		13740895	BG214874			ILMN_1832151	0002260102	S	345	CTTGGAGTCAGGGCGGCCACAATGGGGTTATAGTCTGAGCAATGGTGGGG	10	-	69663048-69663097		RST34529 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_936246.1	ILMN_37401	LOC653886	XM_936246.1	XM_936246.1		653886	88979864	XM_936246.1	LOC653886	XP_941339.1	ILMN_1729304	0004060445	S	140	AAGCCAAGCTCACCAAACTGAAGATGCCTTCTCACAATACATACGCCTAG					PREDICTED: Homo sapiens similar to AF4/FMR2 family member 1 (Protein AF-4) (Proto-oncogene AF4) (Protein FEL) (LOC653886), mRNA.					
Homo sapiens	RefSeq	XM_938110.1	ILMN_137459	LOC649025	XM_938110.1	XM_938110.1		649025	88988369	XM_938110.1	LOC649025	XP_943203.1	ILMN_1750262	0004640487	S	2289	CCTTATGAACTTAGCCTTCCCTAGCAGATTGAGTTTCCTAATTTGTCCGG					PREDICTED: Homo sapiens hypothetical protein LOC649025 (LOC649025), mRNA.					
Homo sapiens	Unigene	Hs.574414	ILMN_126595	HS.574414	Hs.574414		Hs.574414		80533273	DA568890			ILMN_1859439	0005870484	S	380	CCTTGCAAGACGGATACTGTTATTGCCCTCTCTTACACATAAGGAAACCG	17	-	18508651-18508700		DA568890 HEMBA1 Homo sapiens cDNA clone HEMBA1001759 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001719767.1	ILMN_344700	LOC100129917	XM_001719767.1	XM_001719767.1		100129917	169167256	XM_001719767.1	LOC100129917	XP_001719819.1	ILMN_3187713	0003610504	A	924	CTGTGAAGAGAAAACTCACTCGCCAGGGTCAGGGGCCGCTTGCTCACTGA				4p16.3d	PREDICTED: Homo sapiens hypothetical protein LOC100129917 (LOC100129917), mRNA.					
Homo sapiens	RefSeq	NM_001007536.3	ILMN_18007	AKR1CL1	NM_001007536.3	NM_001007536.3		340811	165932371	NM_001007536.3	AKR1CL1	NP_001007537.1	ILMN_3307911	0001400066	S	357	CGGGCAGAATTGGTTCACCCGGCCCTAGAAAGGTCACTGAAGAAACTTGG				10p15.1c	Homo sapiens aldo-keto reductase family 1, member C-like 1 (AKR1CL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ16347	FLJ16347
Homo sapiens	RefSeq	XM_928011.1	ILMN_41120	LOC643722	XM_928011.1	XM_928011.1		643722	88965445	XM_928011.1	LOC643722	XP_933104.1	ILMN_1652649	0006350630	S	181	CCCGGTGCCTCCAGGGCCACCTGCTTTGGAAGACGTTTCCCTGGATCTAG	3	-	112772305-112772354		PREDICTED: Homo sapiens similar to Poliovirus receptor related protein 2 precursor (Herpes virus entry mediator B) (HveB) (Nectin 2) (CD112 antigen) (LOC643722), mRNA.					
Homo sapiens	Unigene	Hs.538000	ILMN_103641	HS.538000	Hs.538000		Hs.538000		10823187	BF064277			ILMN_1834456	0002070670	S	275	AAGCTGCCAACCACTTACGCTGAACAGATGACAGAAGGAAAAGGCAACCC	1	+	86935952-86936001		7j57h05.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:3390585 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006987.2	ILMN_22099	RPH3AL	NM_006987.2	NM_006987.2		9501	31543557	NM_006987.2	RPH3AL	NP_008918.1	ILMN_1693717	0005260408	S	2120	AGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGTTCAGCCTGTC	17	-	65450-65499	17p13.3g	Homo sapiens rabphilin 3A-like (without C2 domains) (RPH3AL), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9367993] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 9367993] [evidence TAS]	Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [pmid 9367993] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NOC2	NOC2
Homo sapiens	RefSeq	NM_025126.2	ILMN_16571	RNF34	NM_025126.2	NM_025126.2		80196	37595536	NM_025126.2	RNF34	NP_079402.2	ILMN_2398664	0004810722	A	1226	AGTCCTGAAACAGGCTCCCCTCACCAGGACAGTCACCCCCAAACTTGACC	12	+	120345755-120345762:120345763-120345804	12q24.31b	Homo sapiens ring finger protein 34 (RNF34), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RFI; FLJ21786; RIF; RIFF	RFI; FLJ21786; RIF; RIFF
Homo sapiens	RefSeq	NM_025126.2	ILMN_16571	RNF34	NM_025126.2	NM_025126.2		80196	37595536	NM_025126.2	RNF34	NP_079402.2	ILMN_1786039	0000650709	A	1793	CGACTGCCAGGGCCTTAGACTCCACATGTCCATTTTTGTTCAGGTATAGC	12	+	120346322-120346371	12q24.31b	Homo sapiens ring finger protein 34 (RNF34), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RFI; FLJ21786; RIF; RIFF	RFI; FLJ21786; RIF; RIFF
Homo sapiens	RefSeq	NM_002598.2	ILMN_5469	PDCD2	NM_002598.2	NM_002598.2		5134	21735591	NM_002598.2	PDCD2	NP_002589.2	ILMN_1797684	0006860452	I	999	GCAAGAGCATTGACTGGGGCATCCTGGCTGTCTTCACCTGTGCTGAGAGC	6	-	170886712-170886761	6q27f	Homo sapiens programmed cell death 2 (PDCD2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 7606924] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP8; MGC12347; ZMYND7	RP8; MGC12347; ZMYND7
Homo sapiens	RefSeq	NM_012207.2	ILMN_356898	HNRNPH3	NM_012207.2	NM_012207.2		3189	186287286	NM_012207.2	HNRNPH3	NP_036339.1	ILMN_3270641	0003130280	M	1900	CTAGCCCTAGATTTTGGAGTAAAACCCCTTCAGCACTTGACCGAAATACC	10	+	70102441-70102490	10q21.3d	Homo sapiens heterogeneous nuclear ribonucleoprotein H3 (2H9) (HNRNPH3), transcript variant 2H9, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8999868] [evidence TAS]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 10858537] [evidence NAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 10858537] [evidence NAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 8999868] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10858537] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_001037161.1	ILMN_13887	ACOT1	NM_001037161.1	NM_001037161.1		641371	81230484	NM_001037161.1	ACOT1	NP_001032238.1	ILMN_2121389	0004810471	S	114	GCAGCCCGAGAGGAAGAGTTGGGCAGAGTTGCAGGGGTCTCCACAGCTGA	14	+	73073794-73073843	14q24.3a	Homo sapiens acyl-CoA thioesterase 1 (ACOT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16940157] [evidence IDA]	The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [pmid 16940157] [evidence IDA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [pmid 16940157] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 16940157] [evidence IDA]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]	LACH2; ACH2; CTE-1	LACH2; ACH2; CTE-1
Homo sapiens	RefSeq	XM_929560.1	ILMN_13887	ACOT1	NM_001037161.1	NM_001037161.1		641371	81230484	NM_001037161.1	ACOT1	NP_001032238.1	ILMN_1715543	0004900438	S	831	TGTGAACTACTTGCTCAGTCATCCTGAGGTAAAAGGTCCAGGAGTTGGGC	14	+	73078125-73078152:73079507-73079528	14q24.3a	Homo sapiens acyl-CoA thioesterase 1 (ACOT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16940157] [evidence IDA]	The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [pmid 16940157] [evidence IDA]; The chemical reactions and pathways involving long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 1676] [pmid 16940157] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 16940157] [evidence IDA]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]	LACH2; ACH2; CTE-1	
Homo sapiens	RefSeq	XM_938838.1	ILMN_138076	CNIH2	XM_938838.1	XM_938838.1		254263	89034864	XM_938838.1	CNIH2	XP_943931.1	ILMN_1808903	0004860450	I	9	GACCACCCCACTCTGCTGCTGTGTACTCTTCAATGCCTCCCCCCAAAATT				11q13.1e	PREDICTED: Homo sapiens cornichon homolog 2 (Drosophila) (CNIH2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_012215.1	ILMN_11399	MGEA5	NM_012215.2	NM_012215.2		10724	142344050	NM_012215.2	MGEA5	NP_036347.1	ILMN_1686750	0006840356	S	4955	CACAGGTGACTGTGAAACAGATGCCCCTGGTCTTGCTTTCATCACTCTAG	10	-	103534340-103534389	10q24.32a	Homo sapiens meningioma expressed antigen 5 (hyaluronidase) (MGEA5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [pmid 9811929] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [pmid 9811929] [evidence TAS]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	MEA5; FLJ23355; NCOAT; FLJ11229; KIAA0679	MEA5; FLJ23355; FLJ11229; NCOAT; KIAA0679
Homo sapiens	RefSeq	NM_006384.2	ILMN_11794	CIB1	NM_006384.2	NM_006384.2		10519	9951921	NM_006384.2	CIB1	NP_006375.1	ILMN_1684205	0004900440	S	789	GCCCTCGTTGTCAGGGCCTCTCCTCACTGCTGTTGTCATTGCTCCGTTTG	15	-	88574504-88574553	15q26.1b	Homo sapiens calcium and integrin binding 1 (calmyrin) (CIB1), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10366599] [evidence IMP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10366599] [evidence IMP]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10366599] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10366599] [evidence IDA]	The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [pmid 9372844] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10366599] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 12011095] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9030514] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 15475008] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	SIP2-28; KIP; CALMYRIN; CIB	SIP2-28; KIP; CALMYRIN; CIB
Homo sapiens	RefSeq	NR_026816.1	ILMN_386546	PSORS1C3	NR_026816.1	NR_026816.1		100130889	223555922	NR_026816.1	PSORS1C3		ILMN_3309634	0007000192	S	318	TAAGTGGTTTCCTAGACCGGGTCGAGAGCAAGTCTCTATTGGTCCCAACT	6	-	31141737-31141786	6p21.33a	Homo sapiens psoriasis susceptibility 1 candidate 3 (non-protein coding) (PSORS1C3), non-coding RNA. XM_001723557					
Homo sapiens	RefSeq	NM_003935.3	ILMN_25533	TOP3B	NM_003935.3	NM_003935.3		8940	34335290	NM_003935.3	TOP3B	NP_003926.1	ILMN_1765021	0004900386	S	2994	GATGTCAGCCCTGGCCGCCTACTTTGTATGATGACCCTGTCCTCCCTCAC	22	-	22311466-22311485:22311486-22311515	22q11.22a	Homo sapiens topoisomerase (DNA) III beta (TOP3B), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9786843] [evidence TAS]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]	Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	FLJ39376	FLJ39376
Homo sapiens	RefSeq	NM_021183.3	ILMN_1730	RAP2C	NM_021183.3	NM_021183.3		57826	32129208	NM_021183.3	RAP2C	NP_067006.3	ILMN_1773561	0004760438	S	3510	GGATCGCAGGAATCAGGGGAAAGTGATTTTAAAGGTGGTTTCTCCAGCAC	X	-	131337426-131337475	Xq26.2a	Homo sapiens RAP2C, member of RAS oncogene family (RAP2C), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	DKFZp313B211	DKFZp313B211
Homo sapiens	RefSeq	NM_014807.3	ILMN_164365	C2CD2L	NM_014807.3	NM_014807.3		9854	42716276	NM_014807.3	C2CD2L	NP_055622.3	ILMN_1778132	0006520364	S	2983	AGACCAGCACCAGTGTCTGCCTCTGAGAATGTTGGCAGCTCACAGAGAGC	11	+	118492676-118492725	11q23.3e	Homo sapiens C2CD2-like (C2CD2L), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0285; DLNB23	KIAA0285; DLNB23; C2CD2L
Homo sapiens	RefSeq	NM_001136501.1	ILMN_370333	ZNF844	NM_001136501.1	NM_001136501.1		284391	211058420	NM_001136501.1	ZNF844	NP_001129973.1	ILMN_3238123	0006220255	S	2604	CTGCCACTCAACTTCAGATGCATAGAAAGATTCACACTGGCGAGAAACCC	19	+	12188396-12188445	19p13.2a	Homo sapiens zinc finger protein 844 (ZNF844), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_016352.2	ILMN_164642	CPA4	NM_016352.2	NM_016352.2		51200	61743915	NM_016352.2	CPA4	NP_057436.2	ILMN_1784294	0000520682	S	2457	GCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCCTTGTC	7	+	129750916-129750965	7q32.2b	Homo sapiens carboxypeptidase A4 (CPA4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The modification of histones by addition of acetyl groups [goid 16573] [pmid 10383164] [evidence NAS]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 10383164] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CPA3	CPA3
Homo sapiens	RefSeq	NM_080627.1	ILMN_3623	C20ORF117	NM_080627.1	NM_080627.1		140710	66773335	NM_080627.1	C20orf117	NP_542194.1	ILMN_1727920	0005130634	I	6418	GGCAGCCTTGGCAGGACATGGGTTAGTGCGCCCATTTTGCTGTGAGGAAA	20	-	34844259-34844308	20q11.23a	Homo sapiens chromosome 20 open reading frame 117 (C20orf117), transcript variant 1, mRNA.				KIAA0889; FLJ44670; dJ132F21.1	KIAA0889; FLJ44670; dJ132F21.1
Homo sapiens	RefSeq	NM_006016.3	ILMN_22810	CD164	NM_006016.3	NM_006016.3		8763	34222157	NM_006016.3	CD164	NP_006007.2	ILMN_1783852	0000010142	S	2677	GTTAGATTTTGCAAGTCTACAAATGAGCTCTTGCAACAGAACTCACAGCC	6	-	109794680-109794729	6q21f	Homo sapiens CD164 molecule, sialomucin (CD164), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 11027692] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11027692] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10491205] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9763543] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 10878358] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10878358] [evidence NAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 11027692] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9763543] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10491205] [evidence IDA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [pmid 10491205] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9763543] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9680353] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9763543] [evidence TAS]		endolyn; MGC-24; MUC-24	endolyn; MGC-24; MUC-24
Homo sapiens	RefSeq	NM_016023.2	ILMN_22397	OTUD6B	NM_016023.2	NM_016023.2		51633	40254878	NM_016023.2	OTUD6B	NP_057107.2	ILMN_2215631	0005550537	S	2762	GGCCAATGTGGTTATGAACAAGATTTGTATGGTCAGCTTCTGTTCTTTCC	8	+	92168117-92168166	8q21.3e	Homo sapiens OTU domain containing 6B (OTUD6B), mRNA.				CGI-77	CGI-77
Homo sapiens	RefSeq	NM_016023.2	ILMN_22397	OTUD6B	NM_016023.2	NM_016023.2		51633	40254878	NM_016023.2	OTUD6B	NP_057107.2	ILMN_1772703	0001050450	S	2328	CTTTTCACACGCCCAGCAGGTAACAATGTGGGAAGCTGGCAGGGTCATTG	8	+	92167683-92167732	8q21.3e	Homo sapiens OTU domain containing 6B (OTUD6B), mRNA.				CGI-77	CGI-77
Homo sapiens	RefSeq	NM_153357.1	ILMN_28722	SLC16A11	NM_153357.1	NM_153357.1		162515	23503292	NM_153357.1	SLC16A11	NP_699188.1	ILMN_2115777	0004880747	S	1041	GGCCTGAGTCTGTTCACACGCCGGGCCTTCTCAATCTTTGCTCTAGGCAC	17	-	6945748-6945797	17p13.1d	Homo sapiens solute carrier family 16, member 11 (monocarboxylic acid transporter 11) (SLC16A11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MCT11; FLJ90193	MCT11; FLJ90193
Homo sapiens	RefSeq	XM_939303.1	ILMN_38097	LOC650212	XM_939303.1	XM_939303.1		650212	89026090	XM_939303.1	LOC650212	XP_944396.1	ILMN_1675657	0006110600	S	98	AGTCCCCTCAATTAAGTCTCAGACGTTTACTGGACCTGTTCATGGACCGC					PREDICTED: Homo sapiens similar to cyclin J (LOC650212), mRNA.					
Homo sapiens	Unigene	Hs.241559	ILMN_83012	HS.241559	Hs.241559		Hs.241559		5725478	AL109791			ILMN_1849117	0001400753	S	1876	CTATCCCCTAACCCCAAGATGCTTACAATCTTCCTAGAGTTCAAGGCTTG	21	-	28249503-28249552		Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 151432					
Homo sapiens	RefSeq	XR_041924.1	ILMN_336479	LOC441242	XR_041924.1	XR_041924.1		441242	169170090	XR_041924.1	LOC441242		ILMN_3277402	0006840008	M	1612	GCAGAAAGCCGCAGCGGGAGAAAGTCTCACTCCAAATTCCCTTGCTTCAG	7	-	64749661-64749710	7q11.21d	PREDICTED: Homo sapiens misc_RNA (LOC441242), miscRNA.					
Homo sapiens	RefSeq	NM_013325.4	ILMN_25088	ATG4B	NM_013325.4	NM_013325.4		23192	47132610	NM_013325.4	ATG4B	NP_037457.3	ILMN_1691173	0000010348	A	2832	AGTTTGCAATTCTTAATGGCAAATAATAAGTTTCAGTAGAAAACAAAAAA	2	+	242261899-242261945:242577027-242577029	2q37.3g	Homo sapiens ATG4 autophagy related 4 homolog B (S. cerevisiae) (ATG4B), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12446702] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12446702] [evidence ISS]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 12446702] [evidence ISS]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 12446702] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 15169837] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 12446702] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [pmid 12446702] [evidence IGI]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15187094] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12446702] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [pmid 15169837] [evidence IDA]	AUTL1; MGC1353; APG4B	AUTL1; MGC1353; APG4B
Homo sapiens	RefSeq	NM_022757.3	ILMN_8560	CCDC14	NM_022757.3	NM_022757.3		64770	40255224	NM_022757.3	CCDC14	NP_073594.3	ILMN_1677239	0004390612	S	7742	ATACCAGGACTTCTTAGCTCAGTATCATCTCCCTTCATGTAAGCAGCACG	3	-	125115379-125115428	3q21.1c	Homo sapiens coiled-coil domain containing 14 (CCDC14), mRNA.				FLJ41065; FLJ12892; DKFZp434L1050	FLJ12892; DKFZp434L1050; FLJ41065
Homo sapiens	RefSeq	NR_003341.2	ILMN_178446	SNORD116-27	NR_003341.2	NR_003341.2		100033439	133922610	NR_003341.2	SNORD116-27		ILMN_3310745	0006100541	S	8	TGATGACTTAAAGATTTATCTAATTTAAATCTGAACAAAATGAGTGACCA	15	+	22897821-22897870	15q11.2e	Homo sapiens small nucleolar RNA, C/D box 116-27 (SNORD116-27), small nucleolar RNA.				HBII-85-27	HBII-85-27
Homo sapiens	RefSeq	XM_933548.1	ILMN_175357	LOC730919	XM_001131779.1	XM_001131779.1		730919	113423625	XM_001131779.1	LOC730919	XP_001131779.1	ILMN_1707386	0002760170	S	1964	CCCACTACACTTGGTCACTCCACTGCATTCTGGTATCCTGGTCTTTGGCA					PREDICTED: Homo sapiens hypothetical LOC730919, transcript variant 1 (LOC730919), mRNA.					
Homo sapiens	RefSeq	NM_004081.4	ILMN_5659	DAZ1	NM_004081.4	NM_004081.4		1617	54292114	NM_004081.4	DAZ1	NP_004072.2	ILMN_2175124	0007150500	S	181	GCCTGTCGGGAGCTGCTGCCTGCCACCACCATGTCTGCTGCAAATCCTGA	Y	-	23736868-23736885:23754333-23754335:23754336-23754364	Yq11.223c	Homo sapiens deleted in azoospermia 1 (DAZ1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of translational initiation [goid 45948] [pmid 16001084] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16001084] [evidence IPI]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [pmid 16001084] [evidence IDA]	SPGY; DAZ	SPGY; DAZ
Homo sapiens	RefSeq	NM_138781.2	ILMN_12569	LOC113386	NM_138781.2	NM_138781.2		113386	49574540	NM_138781.2	LOC113386	NP_620136.2	ILMN_1667330	0006220600	S	1082	CCCCTTATCATCACTGCCTATTCGCTCTTCCTCCAGCCTCTGGCAACCAC	19	+	63518512-63518561	19q13.43c	Homo sapiens similar to envelope protein (LOC113386), mRNA.				FLJ44718; FLJ46452	FLJ44718; FLJ46452
Homo sapiens	Unigene	Hs.368690	ILMN_87816	HS.368690	Hs.368690		Hs.368690		27835290	BX108606			ILMN_1899351	0001990754	S	553	CCTCTCCCTTTGTGTAGCAGCCACATGGTTTACAAAGACAAGCCCTCCAG	3	+	59381018-59381067		BX108606 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGp998B143579, mRNA sequence					
Homo sapiens	RefSeq	NM_012164.2	ILMN_28252	FBXW2	NM_012164.2	NM_012164.2		26190	7549806	NM_012164.2	FBXW2	NP_036296.1	ILMN_1775753	0001660332	S	1539	TGGGTGCAACCTCTGCGGCAGCCGACTGCATGAACCAAAGTTCTCACCTA	9	-	122566557-122566606	9q33.2a	Homo sapiens F-box and WD-40 domain protein 2 (FBXW2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10531035] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15070733] [evidence IPI]	FBW2; Fwd2; Md6	FBW2; Fwd2; Md6
Homo sapiens	RefSeq	NM_003265.2	ILMN_5813	TLR3	NM_003265.2	NM_003265.2		7098	19718735	NM_003265.2	TLR3	NP_003256.1	ILMN_1689578	0002060377	S	2098	CCAACATCCCTGAGCTGTCAAGCCACTACCTTTGCAACACTCCACCTCAC	4	+	187004837-187004886	4q35.1f	Homo sapiens toll-like receptor 3 (TLR3), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9435236] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 12855817] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 12609980] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 11607032] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 12692549] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 15064760] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 12054664] [evidence NAS]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [pmid 12054664] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9435236] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10426995] [evidence TAS]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 12054664] [evidence NAS]; The series of events in which a stimulus from a virus is received and converted into a molecular signal [goid 9597] [pmid 12054664] [evidence NAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 10426995] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [pmid 16286015] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-alpha [goid 45356] [pmid 16286015] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [pmid 12054664] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [pmid 16286015] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [pmid 12133979] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IEA]	Interacting selectively with double-stranded RNA [goid 3725] [pmid 16111635] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 12054664] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 12054664] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD283	CD283
Homo sapiens	RefSeq	NM_003265.2	ILMN_5813	TLR3	NM_003265.2	NM_003265.2		7098	19718735	NM_003265.2	TLR3	NP_003256.1	ILMN_2155708	0000730762	S	2691	CTCTGTTTGCGAAGAGGAATGTTTAAATCTCACTGCATCTTGAACTGGCC	4	+	187005902-187005951	4q35.1f	Homo sapiens toll-like receptor 3 (TLR3), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9435236] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 12855817] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 12609980] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 11607032] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 12692549] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 15064760] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 12054664] [evidence NAS]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [pmid 12054664] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9435236] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10426995] [evidence TAS]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 12054664] [evidence NAS]; The series of events in which a stimulus from a virus is received and converted into a molecular signal [goid 9597] [pmid 12054664] [evidence NAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 10426995] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [pmid 16286015] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-alpha [goid 45356] [pmid 16286015] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [pmid 12054664] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [pmid 16286015] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [pmid 12133979] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IEA]	Interacting selectively with double-stranded RNA [goid 3725] [pmid 16111635] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 12054664] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 12054664] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD283	CD283
Homo sapiens	RefSeq	NM_014650.2	ILMN_12036	ZNF432	NM_014650.2	NM_014650.2		9668	45331209	NM_014650.2	ZNF432	NP_055465.1	ILMN_1693788	0001990768	S	2494	TCATCTGAGAGAGAGTCTGTGGATTGGGGGTAACCTTTCATTTGTCAACC	19	-	57228518-57228567	19q13.33e	Homo sapiens zinc finger protein 432 (ZNF432), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001005171.1	ILMN_4622	OR52K1	NM_001005171.1	NM_001005171.1		390036	52353257	NM_001005171.1	OR52K1	NP_001005171.1	ILMN_1757795	0005570672	S	745	GCCATCCTGTCCACCTACACTCCAGTAGTCATCTCTTCAGTCATGCACCG	11	+	4467451-4467500	11p15.4d	Homo sapiens olfactory receptor, family 52, subfamily K, member 1 (OR52K1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-8	OR11-8
Homo sapiens	RefSeq	XM_001714161.1	ILMN_341923	LOC100129906	XM_001714161.1	XM_001714161.1		100129906	169194788	XM_001714161.1	LOC100129906	XP_001714213.1	ILMN_3261022	0002760392	M	490	TCCGTCGCCTAACGTCCACCGAAAACCCCCCTGCAATAACGCCCGTCACA				10q11.21b	PREDICTED: Homo sapiens hypothetical protein LOC100129906 (LOC100129906), mRNA.					
Homo sapiens	RefSeq	NM_005084.2	ILMN_29396	PLA2G7	NM_005084.2	NM_005084.2		7941	31543409	NM_005084.2	PLA2G7	NP_005075.2	ILMN_1701195	0003390438	S	1083	CAGATGTGGTATTGCCCTGGATGCATGGATGTTTCCACTGGGTGATGAAG	6	-	46783814-46783857:46785023-46785028	6p12.3e	Homo sapiens phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) (PLA2G7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8675689] [evidence TAS]; An enzyme complex composed of two catalytic alpha subunits, which form a catalytic dimer, and a non-catalytic, regulatory beta subunit; the catalytic dimer may be an alpha1/alpha1 or alpha2/alpha2 homodimer, or an alpha1/alpha2 heterodimer. Modulates the action of platelet-activating factor (PAF) [goid 8247] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10748027] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 8675689] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PAFAH; LDL-PLA2	PAFAH; LDL-PLA2
Homo sapiens	RefSeq	NM_000416.1	ILMN_546	IFNGR1	NM_000416.1	NM_000416.1		3459	4557879	NM_000416.1	IFNGR1	NP_000407.1	ILMN_1675939	0002470358	S	1771	CGGAACATATCCAGTACTCCTGGTTCCTAGGTGAGCAGGTGATGCCCCAG	6	-	137560553-137560602	6q23.3c	Homo sapiens interferon gamma receptor 1 (IFNGR1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2971451] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2971451] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 2954953] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with interferon-gamma to initiate a change in cell activity. Interferon-gamma is also known as type II interferon [goid 4906] [pmid 2971451] [evidence TAS]; Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [evidence IEA]	CD119; IFNGR; FLJ45734	CD119; IFNGR; FLJ45734
Homo sapiens	RefSeq	NM_001025266.1	ILMN_175119	C3ORF70	NM_001025266.1	NM_001025266.1		285382	70608184	NM_001025266.1	C3orf70	NP_001020437.1	ILMN_2135339	0006060403	S	5603	TGTTCTCTTAGTAGCCTGAACACTTCTCAAAGCGACTTATCACTAGCGGC	3	-	186278780-186278829	3q27.2a	Homo sapiens chromosome 3 open reading frame 70 (C3orf70), mRNA.					
Homo sapiens	RefSeq	NM_006205.1	ILMN_7630	PDE6H	NM_006205.1	NM_006205.1		5149	5453867	NM_006205.1	PDE6H	NP_006196.1	ILMN_1702965	0005910131	S	281	GGGAGGCATTCAGCCACCTGGAATTGCATGAGCTCGCTCAGTTTGGGATT	12	+	15025622-15025671	12p12.3e	Homo sapiens phosphodiesterase 6H, cGMP-specific, cone, gamma (PDE6H), mRNA.		The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 8786098] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity [goid 45742] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 45745] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [pmid 8786098] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]	RCD3	RCD3
Homo sapiens	RefSeq	XM_001713918.1	ILMN_340356	LOC100130328	XM_001713918.1	XM_001713918.1		100130328	169216365	XM_001713918.1	LOC100130328	XP_001713970.1	ILMN_3231804	0003190086	I	1907	TAGCCAGGACACAGGGATGCAGGGGTCAAGCATGTAAGCACCAACTGGCC					PREDICTED: Homo sapiens similar to hCG2045904 (LOC100130328), mRNA.					
Homo sapiens	RefSeq	XM_001713918.1	ILMN_340356	LOC100130328	XM_001713918.1	XM_001713918.1		100130328	169216365	XM_001713918.1	LOC100130328	XP_001713970.1	ILMN_3182898	0004760687	A	1592	GCTGTTTGCTTCATGGCATGCAGGAGTCTCTGCTACACTTTCCTGGAGGC					PREDICTED: Homo sapiens similar to hCG2045904 (LOC100130328), mRNA.					
Homo sapiens	RefSeq	NM_001001851.1	ILMN_8344	ITIH5	NM_030569.4	NM_030569.4		80760	153945779	NM_030569.4	ITIH5	NP_085046.4	ILMN_1731862	0000770193	A	1782	GGGACACCAACCACATCGAGCGTCTCTGGAGCTACCTCACCACAAAGGAG	10	-	7667956-7668005	10p14e	Homo sapiens inter-alpha (globulin) inhibitor H5 (ITIH5), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	DKFZp686F0145; pp14776; MGC10848	DKFZp686F0145; pp14776; MGC10848
Homo sapiens	RefSeq	NM_181701.2	ILMN_165145	QSOX2	NM_181701.3	NM_181701.3		169714	145580630	NM_181701.3	QSOX2	NP_859052.3	ILMN_1789384	0000290441	S	4233	ATGGCCATACTCAGACACACCTTGTGTGGCCTGCTCAGAGCTGGATGCCA	9	-	139098426-139098475	9q34.3d	Homo sapiens quiescin Q6 sulfhydryl oxidase 2 (QSOX2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 R'C(R)SH + O2 = 2 R'C(R)S-S(R)CR' + 2 H2O [goid 16972] [evidence IEA]; Catalysis of the reaction: 4 R'C(R)SH + O2 = 2 R'C(R)S-S(R)CR' + 2 H2O [goid 16972] [evidence IEA]	SOXN; QSCN6L1; RP11-83N9.4; DKFZp762A2013	QSOX2; SOXN; RP11-83N9.4; DKFZp762A2013
Homo sapiens	Unigene	Hs.573264	ILMN_125445	HS.573264	Hs.573264		Hs.573264		27846276	BX104737			ILMN_1820787	0000290273	S	445	CCCTTGTGGAATGGAGCTCACTGAACCTCTCTGATGGCTGCCCGATCGTT	6	+	26582548-26582597		BX104737 Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone IMAGp998J084400, mRNA sequence					
Homo sapiens	RefSeq	NM_001012421.1	ILMN_22258	ANKRD20A2	NM_001012421.1	NM_001012421.1		441430	60115722	NM_001012421.1	ANKRD20A2	NP_001012421.1	ILMN_3244353	0002970564	S	2528	GGAGTAGTAAGTATCAAGGAAGATAAATATTTTCAAACTTCTAGAAAGAA	9	+	42396633-42396682	9p12a-p11.2d	Homo sapiens ankyrin repeat domain 20 family, member A2 (ANKRD20A2), mRNA.					
Homo sapiens	RefSeq	NM_001007529.1	ILMN_11156	FLJ40194	NM_001007529.1	NM_001007529.1		124871	56090575	NM_001007529.1	FLJ40194	NP_001007530.1	ILMN_1800914	0003390671	S	1910	GGGAAGCTGAGAGCAGAGGAGGGAGGAAGACTTACTTTTCACCGTGTTCT	17	+	44688403-44688452	17q21.32c	Homo sapiens FLJ40194 protein (FLJ40194), mRNA.					
Homo sapiens	RefSeq	NM_032111.2	ILMN_15720	MRPL14	NM_032111.2	NM_032111.2		64928	55769542	NM_032111.2	MRPL14	NP_115487.2	ILMN_2072603	0000430196	S	540	GCTGGCCATTGCTCAGAACTTTGTGTGAGTTGAGCCCAGGCCTCTGGTTG	6	-	44189535-44189557:44189558-44189584	6p21.1b	Homo sapiens mitochondrial ribosomal protein L14 (MRPL14), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC70566; RMPL32; RPML32; MRP-L32	RMPL32; MRP-L32; MGC70566; RPML32
Homo sapiens	RefSeq	NM_016470.6	ILMN_18574	C20ORF111	NM_016470.6	NM_016470.6		51526	23346408	NM_016470.6	C20orf111	NP_057554.4	ILMN_2049727	0002810082	S	910	GAGTCTTCGTGGATGATGTGACCATTGAGGACCTGTCAGGCTACATGGAG	20	-	42825748-42825797	20q13.12a	Homo sapiens chromosome 20 open reading frame 111 (C20orf111), mRNA.				dJ1183I21.1; HSPC207; Perit1	dJ1183I21.1; HSPC207; Perit1
Homo sapiens	RefSeq	XM_497719.2	ILMN_43269	LOC391124	XM_497719.2	XM_497719.2		391124	88943551	XM_497719.2	LOC391124	XP_497719.2	ILMN_1770854	0003360692	S	74	CTCAGCACCCAGGTGGCCGTGGCAATGCTGGCGGCATGCATCACCACAGG	1	+	158256519-158256523:158256807-158256851	1q23.2c	PREDICTED: Homo sapiens similar to 60S ribosomal protein L27a (LOC391124), mRNA.					
Homo sapiens	RefSeq	NM_002528.4	ILMN_15981	NTHL1	NM_002528.4	NM_002528.4		4913	38455392	NM_002528.4	NTHL1	NP_002519.1	ILMN_2227968	0002070184	S	840	TGTGGCACGAGATCAATGGACTCTTGGTGGGCTTCGGCCAGCAGACCTGT	16	-	2029994-2030043	16p13.3e	Homo sapiens nth endonuclease III-like 1 (E. coli) (NTHL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12531031] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10583946] [evidence EXP]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The endonucleolytic cleavage of the damaged strand of DNA 5' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision follows the incision formed 3' to the site of damage [goid 6296] [pmid 8990169] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The disruption of the bond between the sugar in the backbone and the C or T base, causing the base to be removed and leaving a depyrimidinated sugar [goid 45008] [pmid 11937636] [evidence EXP]; The disruption of the bond between the sugar in the backbone and the C or T base, causing the base to be removed and leaving a depyrimidinated sugar [goid 45008] [pmid 10583946] [evidence EXP]	Catalysis of the formation of a covalent enzyme-pyrimidine base intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apyrimidinic (AP) site. Enzymes with this activity recognize and remove oxidized pyrimidine bases by cleaving the N-C1' glycosidic bond between the oxidized pyrimidine and the deoxyribose sugar [goid 703] [pmid 10583946] [evidence EXP]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 15358233] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [pmid 9831664] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15358233] [evidence IPI]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [pmid 10882850] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	NTH1; OCTS3	NTH1; OCTS3
Homo sapiens	RefSeq	NM_032483.2	ILMN_1833	PPAPDC1B	NM_032483.2	NM_032483.2		84513	40316920	NM_032483.2	PPAPDC1B	NP_115872.1	ILMN_1675406	0000540047	S	501	CAGGGAAGTTACACTGCTTCACACCACAAGGCCGTGGGAAATCTTGGAGG	8	-	38242897-38242946	8p12a	Homo sapiens phosphatidic acid phosphatase type 2 domain containing 1B (PPAPDC1B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HTPAP	HTPAP
Homo sapiens	RefSeq	XM_001719312.1	ILMN_348046	LOC100132029	XM_001719312.1	XM_001719312.1		100132029	169215495	XM_001719312.1	LOC100132029	XP_001719364.1	ILMN_3246051	0002190095	S	468	AAAAAAGACATCGCTAGTGAGCACGCTGTATACGACATCGCTAATGAGGA	22	+	17118122-17118171	22q11.21b	PREDICTED: Homo sapiens hypothetical protein LOC100132029 (LOC100132029), mRNA.					
Homo sapiens	RefSeq	XM_925948.1	ILMN_41757	LOC642433	XM_925948.1	XM_925948.1		642433	88943986	XM_925948.1	LOC642433	XP_931041.1	ILMN_1780923	0005810041	S	213	GAGGATTTACGGAAGCAGGAGGAGTCCGTGCAGAAGCACCATCAGACCTT	1	+	32719-32768		PREDICTED: Homo sapiens similar to AAA-ATPase  TOB3 (LOC642433), mRNA.					
Homo sapiens	Unigene	Hs.441195	ILMN_92331	HS.441195	Hs.441195		Hs.441195		19003358	BM690100			ILMN_1872266	0001030671	S	569	GAACAGTCCCCATAGGTCCTGCCTTTTTTACCTGAGACAGGGCAAATGAC	11	+	69571525-69571574		UI-E-CK1-abr-h-04-0-UI.r1 UI-E-CK1 Homo sapiens cDNA clone UI-E-CK1-abr-h-04-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001725233.1	ILMN_339548	LOC100132315	XM_001725233.1	XM_001725233.1		100132315	169166236	XM_001725233.1	LOC100132315	XP_001725285.1	ILMN_3239307	0001400685	S	1388	CTCTGTCTGCCTTTGCCGGTGTCGCCGGAAGCTGCGTCGGGATGCCGGAA	4	+	132880047-132880096	4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100132315 (LOC100132315), mRNA.					
Homo sapiens	Unigene	Hs.549435	ILMN_110002	HS.549435	Hs.549435		Hs.549435		2050908	AA398827			ILMN_1829253	0007200332	S	256	GAGGCAACTGGGACAGTAGCTGTTGAATGAACTCCTCTTCTACCAACGCC	1	-	95590504-95590553		zt86g03.r1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:729268 5, mRNA sequence					
Homo sapiens	Unigene	Hs.551438	ILMN_110644	HS.551438	Hs.551438		Hs.551438		2817483	AA766245			ILMN_1866868	0000050438	S	65	TCAGCAGATGTCCTAAGCTATGGGTGGTGGGGCAGTCAGCAGAGAAGGCC	2	+	48315594-48315643		oa13c01.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:1304832 3, mRNA sequence					
Homo sapiens	RefSeq	XR_039191.1	ILMN_335209	LOC390298	XR_039191.1	XR_039191.1		390298	169204598	XR_039191.1	LOC390298		ILMN_3275799	0003060369	M	676	GTAACATAAAAAGTATGCTTGCGGGCGTCCGGTGCCATGGAGGAGTACGC				12p12.3c	PREDICTED: Homo sapiens similar to translocase of inner mitochondrial membrane 17 homolog B (LOC390298), miscRNA.					
Homo sapiens	Unigene	Hs.126468	ILMN_76266	HS.126468	Hs.126468		Hs.126468		4372555	AI479387			ILMN_1860820	0005490059	S	170	GGCATCAGGGTTTGAGAGAGATGTTGGCAAAGTAAATCTCCTCCTGAGAG	6	+	116796587-116796636		tm27h01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2157841 3, mRNA sequence					
Homo sapiens	RefSeq	XM_932192.1	ILMN_164117	PGA3	NM_001079807.1	NM_001079807.1		643834	119372297	NM_001079807.1	PGA3	NP_001073275.1	ILMN_1727539	0001260762	A	1212	GTGGCTTAAGCCTAAGTCTCTTCAGCCACCTCCCAGGAAGATCTGGCCTC	11	+	60736742-60736750:60736751-60736791	11q12.2b	Homo sapiens pepsinogen 3, group I (pepsinogen A) (PGA3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence NAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 6300126] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DKFZp666J2410	
Homo sapiens	RefSeq	NM_001079807.1	ILMN_164117	PGA3	NM_001079807.1	NM_001079807.1		643834	119372297	NM_001079807.1	PGA3	NP_001073275.1	ILMN_2163324	0003830414	S	222	TGGAAGGCTCCCACCCTGGTAGATGAACAGCCCCTGGAGAACTACCTGGA	11	+	60728267-60728316	11q12.2b	Homo sapiens pepsinogen 3, group I (pepsinogen A) (PGA3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence NAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 6300126] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DKFZp666J2410	DKFZp666J2410
Homo sapiens	RefSeq	XM_927605.1	ILMN_164117	PGA3	NM_001079807.1	NM_001079807.1		643834	119372297	NM_001079807.1	PGA3	NP_001073275.1	ILMN_1677711	0004280164	I	16	TCTTGCCTTCTCCCTCGAGTTGGGACCCGGGAAGAACCATGAAGTGGCTG	11	+	60727575-60727612:60727613-60727624	11q12.2b	Homo sapiens pepsinogen 3, group I (pepsinogen A) (PGA3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence NAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 6300126] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DKFZp666J2410	
Homo sapiens	RefSeq	XM_938115.1	ILMN_164117	PGA3	NM_001079807.1	NM_001079807.1		643834	119372297	NM_001079807.1	PGA3	NP_001073275.1	ILMN_1687842	0001510332	S	918	CCCATTGCCAACATCCAGAGCGACATCGGAGCCAGCGAGAACTCAGATGG	11	+	60735229-60735278	11q12.2b	Homo sapiens pepsinogen 3, group I (pepsinogen A) (PGA3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence NAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 6300126] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DKFZp666J2410	
Homo sapiens	RefSeq	NM_172020.1	ILMN_181143	POM121	NM_172020.1	NM_172020.1		9883	26051277	NM_172020.1	POM121	NP_742017.1	ILMN_2145050	0003930475	S	1368	TCCTTGACAGGCGCTTACGCAAGTGGCATCCCTAGCTCCAGCCGCAATGC	7	+	71733382-71733431	7q11.23a	Homo sapiens POM121 membrane glycoprotein (rat) (POM121), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		DKFZp586P2220; MGC3792; DKFZp586G1822; FLJ41820; KIAA0618; DKFZP586G1822; DKFZP586P2220; POM121A	DKFZp586P2220; MGC3792; DKFZp586G1822; FLJ41820; KIAA0618; DKFZP586G1822; DKFZP586P2220; POM121A
Homo sapiens	RefSeq	NM_182832.1	ILMN_22443	PLAC4	NM_182832.2	NM_182832.2		191585	121949814	NM_182832.2	PLAC4	NP_878252.2	ILMN_1654466	0004050504	S	7962	TTTAGAGATGTGAGTTGTGAGGCACTGGGGAGGCAGGCACACGTCCTCCA	21	-	42549155-42549204	21q22.3a	Homo sapiens placenta-specific 4 (PLAC4), mRNA.	The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC126666; MGC126664	
Homo sapiens	RefSeq	XM_001128267.2	ILMN_162743	LOC727869	XM_001128267.2	XM_001128267.2		727869	169203586	XM_001128267.2	LOC727869	XP_001128267.1	ILMN_3285429	0000580288	M	780	GGGGGGCTTTAAGTCAGCCATGGACATACTGAAGCAAGAGGAATGAAGGG				11q22.2a	PREDICTED: Homo sapiens hypothetical LOC727869 (LOC727869), mRNA.					
Homo sapiens	RefSeq	NM_000633.2	ILMN_171007	BCL2	NM_000633.2	NM_000633.2		596	72198188	NM_000633.2	BCL2	NP_000624.2	ILMN_1801119	0003180494	I	5863	GAGCACAGAAGATGGGAACACTGGTGGAGGATGGAAAGGCTCGCTCAATC	18	-	60791158-60791207	18q21.33b	Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nuclear gene encoding mitochondrial protein, transcript variant alpha, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11530860] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9027314] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 9027314] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 11463392] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10198631] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 12624108] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 1453000] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 1502141] [evidence IDA]	The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [pmid 9027314] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11684014] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9027314] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10506221] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10620603] [evidence IDA]; An immune response mediated through a body fluid [goid 6959] [pmid 1908951] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 11530860] [evidence NAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 8949945] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 15231831] [evidence EXP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [pmid 15799693] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 16307838] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus [goid 10039] [pmid 11264898] [evidence IDA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a process that reduces the internal pH of a cell [goid 32848] [pmid 10506221] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [pmid 9184696] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [pmid 12421819] [evidence IDA]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 1373874] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8949945] [evidence IDA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 9111042] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 9111042] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that modulates the frequency, rate or extent of viral genome replication [goid 45069] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [pmid 9843949] [evidence ISS]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 10620603] [evidence IDA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [evidence IEA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [pmid 9843949] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51902] [pmid 9027314] [evidence TAS]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 10620603] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9111042] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9111042] [evidence IPI]; Interacting selectively with the BH3 domain of a protein of the Bcl-2 family. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death [goid 51434] [pmid 9111042] [evidence IPI]	Bcl-2	Bcl-2
Homo sapiens	RefSeq	NM_000633.2	ILMN_171007	BCL2	NM_000633.2	NM_000633.2		596	72198188	NM_000633.2	BCL2	NP_000624.2	ILMN_2246956	0004150201	I	5969	CATGCACCTAAACCTTTTGGAAAATCTGCCGTGGGCCCTCCAGATAGCTC	18	-	60791052-60791101	18q21.33b	Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nuclear gene encoding mitochondrial protein, transcript variant alpha, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11530860] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9027314] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 9027314] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 11463392] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10198631] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 12624108] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 1453000] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 1502141] [evidence IDA]	The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [pmid 9027314] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11684014] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9027314] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10506221] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10620603] [evidence IDA]; An immune response mediated through a body fluid [goid 6959] [pmid 1908951] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 11530860] [evidence NAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 8949945] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 15231831] [evidence EXP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [pmid 15799693] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 16307838] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus [goid 10039] [pmid 11264898] [evidence IDA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a process that reduces the internal pH of a cell [goid 32848] [pmid 10506221] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [pmid 9184696] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [pmid 12421819] [evidence IDA]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 1373874] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8949945] [evidence IDA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 9111042] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 9111042] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that modulates the frequency, rate or extent of viral genome replication [goid 45069] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [pmid 9843949] [evidence ISS]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 10620603] [evidence IDA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [evidence IEA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [pmid 9843949] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51902] [pmid 9027314] [evidence TAS]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 10620603] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9111042] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9111042] [evidence IPI]; Interacting selectively with the BH3 domain of a protein of the Bcl-2 family. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death [goid 51434] [pmid 9111042] [evidence IPI]	Bcl-2	Bcl-2
Homo sapiens	RefSeq	NM_001587.3	ILMN_22966	OCRL	NM_001587.3	NM_001587.3		4952	21396492	NM_001587.3	OCRL	NP_001578.2	ILMN_2382121	0006560576	A	4387	CTGGTGCCACAGATCTGGAGGTATGATAGGTCAGGGGCTAGGTGTTGAAC	X	+	128553468-128553517	Xq25g	Homo sapiens oculocerebrorenal syndrome of Lowe (OCRL), transcript variant b, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [pmid 1840503] [evidence TAS]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [pmid 1840503] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7761412] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 1321346] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [pmid 1321346] [evidence TAS]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [pmid 7761412] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	NPHL2; OCRL1; LOCR; INPP5F	NPHL2; OCRL1; LOCR; INPP5F
Homo sapiens	RefSeq	NM_002252.3	ILMN_11225	KCNS3	NM_002252.3	NM_002252.3		3790	25952107	NM_002252.3	KCNS3	NP_002243.3	ILMN_2175112	0000540204	S	1738	CCAGTCTCTCTTCTGTAGGCATTGTGGTGAGCGATCCTGACTCCACAGAT	2	+	17977114-17977163	2p24.2b	Homo sapiens potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10484328] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 10484328] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 15459] [pmid 10484328] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC9481; KV9.3	MGC9481; KV9.3
Homo sapiens	RefSeq	NM_002252.3	ILMN_11225	KCNS3	NM_002252.3	NM_002252.3		3790	25952107	NM_002252.3	KCNS3	NP_002243.3	ILMN_2175114	0005080259	S	2191	CTGACAAGTAGAATCAAAGGTGCAGCTGACTGAGACGACATGCATGTAAG	2	+	17977567-17977616	2p24.2b	Homo sapiens potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (KCNS3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10484328] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 10484328] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 15459] [pmid 10484328] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC9481; KV9.3	MGC9481; KV9.3
Homo sapiens	Unigene	Hs.537387	ILMN_103278	HS.537387	Hs.537387		Hs.537387		50949895	CR627403			ILMN_1906815	0006560196	S	3815	CAAATGGTAGCACTTTGAAATATGCCAGGCTTTCCAGCAGGGGGTTTTCT					Homo sapiens mRNA; cDNA DKFZp686I0981 (from clone DKFZp686I0981)					
Homo sapiens	RefSeq	NM_138270.1	ILMN_9682	ATRX	NM_000489.3	NM_000489.3		546	130979463	NM_000489.3	ATRX	NP_000480.2	ILMN_1666885	0002340600	A	203	CAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAG	X	-	76972720-76972720:77041468-77041487:77041488-77041516	Xq21.1a	Homo sapiens alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) (ATRX), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7874112] [evidence TAS]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [pmid 10570185] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 7697714] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10742099] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 7697714] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7697714] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 7697714] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12953102] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	XNP; ZNF-HX; MRXHF1; XH2; ATR2; SFM1; SHS; MRXS3; RAD54L; RAD54; MGC2094	XNP; ZNF-HX; MRXHF1; XH2; ATR2; SFM1; SHS; MRXS3; RAD54L; RAD54; MGC2094
Homo sapiens	RefSeq	XR_039101.1	ILMN_347319	LOC100131149	XR_039101.1	XR_039101.1		100131149	169165009	XR_039101.1	LOC100131149		ILMN_3213406	0001090612	A	226	GTGTCTTCCGCGCAGGTAAAAGCTGCTGAAACACATCAAGAGCCAAAGGA	3	-	37806665-37806714	3p22.2b	PREDICTED: Homo sapiens misc_RNA (LOC100131149), miscRNA.					
Homo sapiens	RefSeq	XR_042126.1	ILMN_338008	LOC90499	XR_042126.1	XR_042126.1		90499	169164576	XR_042126.1	LOC90499		ILMN_3299162	0000520685	M	350	CCAGGCTGTGTTTTTGCTCATTGCTGGAGGTGCTGTCAGGGGCCTTGCCG				2q11.1b	PREDICTED: Homo sapiens misc_RNA (LOC90499), miscRNA.					
Homo sapiens	RefSeq	NM_015297.1	ILMN_306800	KIAA1045	NM_015297.1	NM_015297.1		23349	149944592	NM_015297.1	KIAA1045	NP_056112.1	ILMN_3246625	0002100162	S	5519	GACACAAAGGCCCTCAAGATTAGCCTCCTGCCATCATGGGTTGGCCTGTG	9	+	34972006-34972055	9p13.3b	Homo sapiens KIAA1045 (KIAA1045), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP11-392A14.4; DKFZp434I2112	RP11-392A14.4; DKFZp434I2112
Homo sapiens	RefSeq	NM_016300.4	ILMN_172653	ARPP-21	NM_016300.4	NM_016300.4		10777	68161512	NM_016300.4	ARPP-21	NP_057384.2	ILMN_2289825	0001690561	I	2857	CACGTTAGCTGGTTAATGGTGCATATTTCTGTCATGTCTGCTAGGTATGC	3	+	35750535-35750562:35753674-35753695	3p22.3a	Homo sapiens cyclic AMP-regulated phosphoprotein, 21 kD (ARPP-21), transcript variant 1, mRNA.				FLJ32997	FLJ32997
Homo sapiens	RefSeq	XM_941655.1	ILMN_40853	LOC339804	XM_291016.4	XM_291016.4		339804	113412981	XM_291016.4	LOC339804	XP_291016.1	ILMN_1754501	0004260609	A	123	GGCCACACCCTTAGAAAACAGAAGGGACATGGAGGCAGAAGAGGAGAACC	2	+	61243769-61243818	2p15d	PREDICTED: Homo sapiens hypothetical gene supported by AK075484; BC014578 (LOC339804), mRNA.					
Homo sapiens	RefSeq	XM_001713794.1	ILMN_338310	LOC100130818	XM_001713794.1	XM_001713794.1		100130818	169216328	XM_001713794.1	LOC100130818	XP_001713846.1	ILMN_3238353	0004060377	S	241	CTTAAGTGTAGTTTCGGGGCCGCAGTCTACGGGGCGACGAGGTGGCAGTG					PREDICTED: Homo sapiens hypothetical protein LOC100130818 (LOC100130818), mRNA.					
Homo sapiens	RefSeq	NM_175895.2	ILMN_10816	C12ORF61	NM_175895.2	NM_175895.2		283416	31343331	NM_175895.2	C12orf61	NP_787091.1	ILMN_1773927	0003170608	S	1104	TAGGGAGAAGGCTGACTGCCATGGAGCCACTTCTGCTTTTGGCCCAGACA	12	-	61282328-61282377	12q14.1d	Homo sapiens chromosome 12 open reading frame 61 (C12orf61), mRNA.				FLJ25590	FLJ25590
Homo sapiens	RefSeq	NM_001011708.1	ILMN_2580	OLA1	NM_001011708.1	NM_001011708.1		29789	58761501	NM_001011708.1	OLA1	NP_001011708.1	ILMN_2348194	0006550474	A	3688	GTGAGACCCTGTCTCCAAAGAGAAAGAGAAACTTGAGAAGGCTTGTGCCC	2	-	174937692-174937741	2q31.1f	Homo sapiens Obg-like ATPase 1 (OLA1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [pmid 17430889] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 17430889] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PTD004; DKFZp313H1942; GTPBP9	PTD004; DKFZp313H1942; GTPBP9
Homo sapiens	Unigene	Hs.379382	ILMN_88682	HS.379382	Hs.379382		Hs.379382		51458660	XM_497688			ILMN_1888474	0000540064	S	815	CTGAGGTGAAGGACTGATGCTTTGCCACCCAAGTGTACTGCAAGTGGCGC					PREDICTED: Homo sapiens similar to urate oxidase (EC 1.7.3.3) - baboon (LOC391051), mRNA					
Homo sapiens	RefSeq	NM_153605.2	ILMN_43895	CRYBG3	NM_153605.2	NM_153605.2		131544	90403578	NM_153605.2	CRYBG3	NP_705833.2	ILMN_2190684	0000830397	S	2756	GCCCAGGGTGAATATCTGACAGTCACTGGAAGTCTAGCAGACACCAGGGC	3	+	97660022-97660071	3q11.2c	Homo sapiens beta-gamma crystallin domain containing 3 (CRYBG3), mRNA.				DKFZp686L13211	DKFZp686L13211
Homo sapiens	RefSeq	NM_138782.1	ILMN_25313	FCHO2	NM_138782.1	NM_138782.1		115548	58743366	NM_138782.1	FCHO2	NP_620137.1	ILMN_1670322	0005860064	S	4618	GAGACCAGTAGATTTTCAATGGGAAATGTACCTAGCAAGCTGGTTCTTGC	5	+	72421833-72421882	5q13.2c	Homo sapiens FCH domain only 2 (FCHO2), mRNA.					
Homo sapiens	RefSeq	NM_015275.1	ILMN_174760	KIAA1033	NM_015275.1	NM_015275.1		23325	40018628	NM_015275.1	KIAA1033	NP_056090.1	ILMN_1782222	0007650376	S	5450	CCTGGAAACGAATTTAAATGGTGTCAAACTGCAGAGCAACAGGGCTTCAG	12	+	104086680-104086729	12q23.3b	Homo sapiens KIAA1033 (KIAA1033), mRNA.					
Homo sapiens	RefSeq	XM_925989.1	ILMN_37913	LOC642489	XM_925989.1	XM_925989.1		642489	88995754	XM_925989.1	LOC642489	XP_931082.1	ILMN_1757072	0005260156	S	1107	TCCCTGGGCCAGCAGGGACCTCTGAAGCCTTCTTTGTGGCCTTATTTTTT	6	+	63980416-63980465	6q12a	PREDICTED: Homo sapiens similar to FK506-binding protein 1A (LOC642489), mRNA.					
Homo sapiens	RefSeq	XM_931459.1	ILMN_39499	LOC643278	XM_931459.1	XM_931459.1		643278	89041822	XM_931459.1	LOC643278	XP_936552.1	ILMN_1708903	0004670215	S	340	GCTTGCCAGCCGAACCCCCCTTCCGGACTGGTTCAGAGGAATGGAGGGTG	17	-	71629550-71629599	17q25.1d	PREDICTED: Homo sapiens hypothetical protein LOC643278 (LOC643278), mRNA.					
Homo sapiens	RefSeq	NM_000782.3	ILMN_163752	CYP24A1	NM_000782.3	NM_000782.3		1591	55770849	NM_000782.3	CYP24A1	NP_000773.2	ILMN_1685663	0006400131	S	2732	GATTTAGGATCTGTGGTGCAGGGCAATGTTTCAAAGTTTAGTCACAGCTT	20	-	52203887-52203936	20q13.2c	Homo sapiens cytochrome P450, family 24, subfamily A, polypeptide 1 (CYP24A1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 7632726] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 42359] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 7632726] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 8506296] [evidence IDA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the hydroxylation of C-24 of 25-hydroxycalciferol (25-hydroxyvitamin D3) to form 24(R),25-dihydroxycalciferol [goid 8403] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor [goid 16709] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [pmid 8506296] [evidence TAS]; Catalysis of the hydroxylation of C-1 of 25-hydroxycalciferol (25-hydroxyvitamin D3) to form 1-alpha,25-dihydroxycalciferol [goid 30342] [pmid 8506296] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CYP24; P450-CC24; MGC126274; CP24; MGC126273	CYP24; P450-CC24; MGC126274; CP24; MGC126273
Homo sapiens	RefSeq	NM_004657.4	ILMN_11513	SDPR	NM_004657.4	NM_004657.4		8436	66346738	NM_004657.4	SDPR	NP_004648.1	ILMN_1715991	0006290114	S	2971	GGCCCAGGAAGCAAATCCCCTGCCTTTAGTATGAACCACTATAAGTAACC	2	-	192407481-192407530	2q32.3a	Homo sapiens serum deprivation response (phosphatidylserine binding protein) (SDPR), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2390065] [evidence IDA]		Interacting selectively with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 1786] [pmid 10191091] [evidence IDA]; Interacting selectively with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 1786] [pmid 2390065] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	SDR; PS-p68	SDR; PS-p68
Homo sapiens	RefSeq	XM_944077.1	ILMN_40500	LOC650185	XM_944077.1	XM_944077.1		650185	88989514	XM_944077.1	LOC650185	XP_949170.1	ILMN_1658415	0004900128	S	253	CCATCCAGGGAGGGCCCAGTGAGGACCCCAACAGTTTCTGCTCTAAAAGA					PREDICTED: Homo sapiens hypothetical protein LOC650185 (LOC650185), mRNA.					
Homo sapiens	RefSeq	XM_937287.1	ILMN_32534	LOC648240	XM_937287.1	XM_937287.1		648240	89037116	XM_937287.1	LOC648240	XP_942380.1	ILMN_1656817	0002370463	S	15	GCCCCGCGGTGGGCTCCCGCGCACTGCCCGAGCATCCCCTACAGGTGCCA					PREDICTED: Homo sapiens hypothetical protein LOC648240 (LOC648240), mRNA.					
Homo sapiens	RefSeq	XM_001715140.1	ILMN_341306	LOC653348	XM_001715140.1	XM_001715140.1		653348	169174933	XM_001715140.1	LOC653348	XP_001715192.1	ILMN_3240694	0004640138	S	16	CCCACCTGGGCGTGCCTGGAAGACTGTGACGCCTTGTTGCCTGTACCCAG	9	+	2276-2325		PREDICTED: Homo sapiens similar to ADAMTS-like 2 (LOC653348), mRNA.					
Homo sapiens	RefSeq	XM_001713681.1	ILMN_337587	LOC100131392	XM_001713681.1	XM_001713681.1		100131392	169203033	XM_001713681.1	LOC100131392	XP_001713733.1	ILMN_3237897	0002320138	S	805	GCGGAGCTGATGAAAATGTGCCATAAACCAGATGTGGAGCTACTTCAGGC					PREDICTED: Homo sapiens similar to ring finger protein 18 (LOC100131392), mRNA.					
Homo sapiens	RefSeq	NM_002390.3	ILMN_162941	ADAM11	NM_002390.4	NM_002390.4		4185	93141025	NM_002390.4	ADAM11	NP_002381.2	ILMN_1711374	0001260661	S	4170	GGAACATGAGACTTCCTGTGACCAGTCCACCCTGGCTCCCAGCTGTCTGT	17	+	40214508-40214557	17q21.31c	Homo sapiens ADAM metallopeptidase domain 11 (ADAM11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9693107] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 8252040] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 9693107] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MDC	MDC
Homo sapiens	RefSeq	NM_017914.2	ILMN_5267	C19ORF24	NM_017914.2	NM_017914.2		55009	42476017	NM_017914.2	C19orf24	NP_060384.2	ILMN_1678052	0000010189	S	537	GAGAGCTCCTTTTGGAACCTGCACAGCCCGCCGACCTGTTGCCACCTGCA	19	+	1229916-1229965	19p13.3i	Homo sapiens chromosome 19 open reading frame 24 (C19orf24), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16847563] [evidence IDA]; Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite [goid 44421] [pmid 16847563] [evidence IDA]			FLJ20640	FLJ20640
Homo sapiens	RefSeq	NM_133466.1	ILMN_15084	ZFP82	NM_133466.2	NM_133466.2		284406	142384038	NM_133466.2	ZFP82	NP_597723.1	ILMN_1740490	0002470142	S	2387	GAGGGAGAGGCACCTGCTGAACCCTGTCTTCTTGACATCCACCAAGATAC	19	-	41574880-41574929	19q13.12b	Homo sapiens zinc finger protein 82 homolog (mouse) (ZFP82), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC45380; KIAA1948	MGC45380; KIAA1948
Homo sapiens	RefSeq	NM_001004743.1	ILMN_2095	OR5M9	NM_001004743.1	NM_001004743.1		390162	52317127	NM_001004743.1	OR5M9	NP_001004743.1	ILMN_1761042	0002710132	S	273	CTATGTGGGATGCTTGGTGCAGTGCTACTTTTTCATTGCCGTTGTCCACG	11	-	56230555-56230604	11q11c	Homo sapiens olfactory receptor, family 5, subfamily M, member 9 (OR5M9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-190	OR11-190
Homo sapiens	RefSeq	XM_945143.1	ILMN_168822	LOC730109	XM_001132198.1	XM_001132198.1		730109	113415340	XM_001132198.1	LOC730109	XP_001132198.1	ILMN_1688611	0002630338	S	212	GGCTTCGCAGACCAAGAGCAAGTCGGCACACCAGGACAGGCATTTGCATG				3q26.1a	PREDICTED: Homo sapiens similar to hCG1811563 (LOC730109), mRNA.					
Homo sapiens	RefSeq	XM_001719614.1	ILMN_336268	LOC647020	XM_001719614.1	XM_001719614.1		647020	169208235	XM_001719614.1	LOC647020	XP_001719666.1	ILMN_3200678	0000070685	A	948	GAGCACCACAGTAGCACCAGCCCCCAACACAATGCAAAAGAGTGACCCGG	15	-	79163785-79163834	15q25.1b	PREDICTED: Homo sapiens similar to hCG1791241 (LOC647020), mRNA.					
Homo sapiens	RefSeq	NM_001033564.1	ILMN_164200	C6ORF225	NM_001033564.1	NM_001033564.1		619208	75677558	NM_001033564.1	C6orf225	NP_001028736.1	ILMN_3248941	0003310204	S	2113	CTGGCACTTTGGGAGGCCGAAGTGGATGGATTATCTGAGGTCAGGCATTC	6	+	112423435-112423484	6q21i	Homo sapiens chromosome 6 open reading frame 225 (C6orf225), mRNA.				DKFZp586F0922	DKFZp586F0922
Homo sapiens	RefSeq	NM_001033564.1	ILMN_164200	C6ORF225	NM_001033564.1	NM_001033564.1		619208	75677558	NM_001033564.1	C6orf225	NP_001028736.1	ILMN_1686889	0002750402	S	2518	TAGGGAGATGGGAATAGACTGAAGACTACTCTGGACTTGCCCTAACAGAG	6	+	112423840-112423889	6q21i	Homo sapiens chromosome 6 open reading frame 225 (C6orf225), mRNA.				DKFZp586F0922	DKFZp586F0922
Homo sapiens	RefSeq	NM_006026.2	ILMN_26614	H1FX	NM_006026.2	NM_006026.2		8971	20336759	NM_006026.2	H1FX	NP_006017.1	ILMN_1773964	0007610538	S	1200	TGCTTTAGGTTTTTGAAACAGCCCCGGCGACGCCTCTATTGGCTCTCGGC	3	-	130516558-130516607	3q21.3c	Homo sapiens H1 histone family, member X (H1FX), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]	MGC8350; H1X; MGC15959	MGC8350; H1X; MGC15959
Homo sapiens	Unigene	Hs.150147	ILMN_78940	HS.150147	Hs.150147		Hs.150147		24809506	CA445086			ILMN_1826717	0001260070	S	421	GCTTCCTTACATGGTGGTGGAGGATGCTATGAGTGGGTGGGCAAAGAGAG	15	-	100159778-100159827		UI-H-DT1-awn-m-21-0-UI.s1 NCI_CGAP_DT1 Homo sapiens cDNA clone UI-H-DT1-awn-m-21-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005187.4	ILMN_179069	CBFA2T3	NM_005187.4	NM_005187.4		863	28872802	NM_005187.4	CBFA2T3	NP_005178.4	ILMN_1771043	0002070427	I	509	CGACGCTGCCCCACGGCCGTTTTCATGGCTGCTTAAAATGGTCTATGGTC	16	-	88964492-88964541	16q24.3a	Homo sapiens core-binding factor, runt domain, alpha subunit 2; translocated to, 3 (CBFA2T3), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9447981] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZMYND4; MTGR2; MTG16; ETO2	ZMYND4; MTGR2; MTG16; ETO2
Homo sapiens	RefSeq	XM_001129414.1	ILMN_179035	LOC731751	XM_001129414.1	XM_001129414.1		731751	113430844	XM_001129414.1	LOC731751	XP_001129414.1	ILMN_3235642	0002000717	S	12390	TCTACTATACTTGGTTGGCAGCATTCCATGAGCTGATTTTCCTGAAACAC					PREDICTED: Homo sapiens similar to protein kinase, DNA-activated, catalytic polypeptide (LOC731751), mRNA.					
Homo sapiens	RefSeq	XM_001724783.1	ILMN_334788	LOC100133483	XM_001724783.1	XM_001724783.1		100133483	169218099	XM_001724783.1	LOC100133483	XP_001724835.1	ILMN_3235525	0000650014	S	368	AGCAGGACACTAGAACACGGTAGCAGTGGCCCATGGGAAGAGATGAGGCC					PREDICTED: Homo sapiens hypothetical protein LOC100133483 (LOC100133483), mRNA.					
Homo sapiens	RefSeq	XM_941880.1	ILMN_32419	LOC652437	XM_941880.1	XM_941880.1		652437	89071472	XM_941880.1	LOC652437	XP_946973.1	ILMN_1790099	0000130458	S	507	CCATGGATTTGACTCTAGACATGGGAGTGGGGAGGAGAGAGCTTCCAGGC					PREDICTED: Homo sapiens similar to Zona pellucida sperm-binding protein 3 precursor (Zona pellucida glycoprotein ZP3) (Zona pellucida protein C) (Sperm receptor) (ZP3A/ZP3B) (LOC652437), mRNA.					
Homo sapiens	RefSeq	NM_173630.2	ILMN_5471	RTTN	NM_173630.2	NM_173630.2		25914	38201695	NM_173630.2	RTTN	NP_775901.2	ILMN_1735658	0006400632	S	6905	CTCCAACACCGTCCAGTTGTGGCAGCTCTCCAGAAGTAATAGCAGCTGAC	18	-	65822163-65822212	18q22.2a-q22.2b	Homo sapiens rotatin (RTTN), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ26356; DKFZP434G145; FLJ39085	FLJ26356; DKFZP434G145; FLJ39085
Homo sapiens	RefSeq	NM_145297.3	ILMN_6756	ZNF626	NM_145297.3	NM_145297.3		199777	115527111	NM_145297.3	ZNF626	NP_660340.1	ILMN_3250147	0005690440	A	4	TTCCGGGTTTGGTGCGGCCTTTGTCTCTCGCTGCAGTCAGAGCTCCAGGT	19	-	20844349-20844398	19p12d	Homo sapiens zinc finger protein 626 (ZNF626), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC104224	MGC104224
Homo sapiens	RefSeq	NM_145297.1	ILMN_6756	ZNF626	NM_145297.3	NM_145297.3		199777	115527111	NM_145297.3	ZNF626	NP_660340.1	ILMN_1794823	0000630767	S	364	GCCAAACCCTCAGTGAGCTTCCTTCAAGTTCACAGTGAGAGCCAAAGTCC	19	-	20828217-20828254:20828490-20828501	19p12d	Homo sapiens zinc finger protein 626 (ZNF626), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC104224	
Homo sapiens	RefSeq	NR_029946.1	ILMN_388448	MIR424	NR_029946.1	NR_029946.1		494336	262205348	NR_029946.1	MIR424		ILMN_3309804	0004860138	S	29	GAAGTGTTCTAAATGGTTCAAAACGTGAGGCGCTGCTATACCCCCTCGTG				Xq26.3a	Homo sapiens microRNA 424 (MIR424), microRNA.					
Homo sapiens	RefSeq	NM_199234.1	ILMN_18396	GDNF	NM_199234.1	NM_199234.1		2668	40549412	NM_199234.1	GDNF	NP_954704.1	ILMN_1705019	0005340438	A	351	GATAACCTGGTTTACCATATTCTAAGAAAGCATTCCGCTAAAAGGTGTGG	5	-	37851519-37851568	5p13.2a	Homo sapiens glial cell derived neurotrophic factor (GDNF), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9811930] [evidence IDA]	The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [pmid 15242795] [evidence IDA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; The maintenance of membrane composition in a postsynaptic membrane, the specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft) [goid 1941] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 7830769] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7830769] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8637574] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [pmid 15242795] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [pmid 8493557] [evidence IDA]; Any process that modulates the frequency, rate or extent of the directed movement of the catecholamine neurotransmitter dopamine into a cell [goid 51584] [pmid 8493557] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8988018] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8493557] [evidence IDA]	HFB1-GDNF; ATF1; ATF2	HFB1-GDNF; ATF1; ATF2
Homo sapiens	RefSeq	NM_198055.1	ILMN_8368	MZF1	NM_198055.1	NM_198055.1		7593	37622340	NM_198055.1	MZF1	NP_932172.1	ILMN_1749838	0001030053	A	2786	TGTCCGCCATGGTCAGAACACCTACCTCCCCTGGTTATTGTGAGGCTGGC	19	-	63765181-63765230	19q13.43c	Homo sapiens myeloid zinc finger 1 (MZF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1860835] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1860835] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10777584] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MZF1B; ZSCAN6; MZF-1; ZNF42; Zfp98	MZF1B; ZSCAN6; ZNF42; MZF-1; Zfp98
Homo sapiens	RefSeq	NM_198055.1	ILMN_8368	MZF1	NM_198055.1	NM_198055.1		7593	37622340	NM_198055.1	MZF1	NP_932172.1	ILMN_1670816	0004880452	I	292	GGATTCGAGGCGGGGAGCATGGGAAGAAGCGGCCAGGAGTATGACCTGAT	19	-	63776413-63776462	19q13.43c	Homo sapiens myeloid zinc finger 1 (MZF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1860835] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1860835] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10777584] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MZF1B; ZSCAN6; MZF-1; ZNF42; Zfp98	MZF1B; ZSCAN6; ZNF42; MZF-1; Zfp98
Homo sapiens	RefSeq	XM_066443.7	ILMN_34803	LOC139046	XM_066443.7	XM_066443.7		139046	89060378	XM_066443.7	LOC139046	XP_066443.7	ILMN_1789609	0004590601	S	709	GCAGCCTTGGTGGAATTCGCTGAGGTTTCCCTGCACAGCCCCAGGGGCAA	X	-	152238993-152239018:152239125-152239148		PREDICTED: Homo sapiens similar to paraneoplastic antigen MA1 (LOC139046), mRNA.					
Homo sapiens	RefSeq	NM_006953.2	ILMN_22511	UPK3A	NM_006953.2	NM_006953.2		7380	56790914	NM_006953.2	UPK3A	NP_008884.1	ILMN_1718477	0001990541	S	699	CCTCAGCCTCGTGGACATGGGGAGTTCTGATGGGGAAACGACTCACGACT	22	+	44067847-44067858:44070105-44070142	22q13.31b-q13.31c	Homo sapiens uroplakin 3A (UPK3A), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [pmid 10514386] [evidence IDA]		UPIII; UPK3; MGC119178	UPIII; UPK3; MGC119178
Homo sapiens	RefSeq	XM_939750.1	ILMN_36215	USP32	XM_939750.1	XM_939750.1		84669	89042892	XM_939750.1	USP32	XP_944843.1	ILMN_1652577	0006480671	I	2	TGGTAACAATAGATACTGAGGAATACAAGAGCGGGGAGGGTGGAAGTAGG				17q23.2a	PREDICTED: Homo sapiens ubiquitin specific peptidase 32 (USP32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	NM_016948.2	ILMN_23998	PARD6A	NM_016948.2	NM_016948.2		50855	82659095	NM_016948.2	PARD6A	NP_058644.1	ILMN_2323848	0004540240	A	848	AATAACGTGGTGCGAGGGGCATCTGGGCGTTTGACAGGTCCTCCCTCTGC	16	+	66253767-66253816	16q22.1b	Homo sapiens par-6 partitioning defective 6 homolog alpha (C. elegans) (PARD6A), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which a virus reproduces. Usually, this is by infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle [goid 16032] [pmid 9482110] [evidence TAS]; The maintenance of junctions between cells [goid 45217] [evidence IEA]; The maintenance of junctions between cells [goid 45217] [evidence ISS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 9482110] [evidence TAS]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence ISS]	TAX40; PAR6C; TIP-40; PAR6alpha; PAR-6A; PAR6	TAX40; PAR6C; TIP-40; PAR6alpha; PAR-6A; PAR6
Homo sapiens	RefSeq	NM_001029862.1	ILMN_171428	LOC642460	XR_016169.1	XR_016169.1		642460	113429084	XR_016169.1	LOC642460		ILMN_1672000	0000610255	A	133	AAGCCTACCTGTGGAAGGAAAGTTTCTCTTCCAAATAAAGCCTTAGAATT	21	-	13720363-13720410:13720504-13720505	21q11.2a-q11.2b	PREDICTED: Homo sapiens similar to ankyrin repeat domain 30A (LOC642460), mRNA.					NY-BR-1.1
Homo sapiens	RefSeq	XM_001725430.1	ILMN_344622	LOC100129720	XM_001725430.1	XM_001725430.1		100129720	169166003	XM_001725430.1	LOC100129720	XP_001725482.1	ILMN_3264066	0001940168	M	375	CCGCAGGCAAGAATGATGGATGGGTGAAAGGGAGGGGGAATACGAAAGCC				3q25.1b	PREDICTED: Homo sapiens hypothetical protein LOC100129720, transcript variant 2 (LOC100129720), mRNA.					
Homo sapiens	RefSeq	NM_020536.2	ILMN_14708	CSRP2BP	NM_020536.2	NM_020536.2		57325	29570789	NM_020536.2	CSRP2BP	NP_065397.1	ILMN_1690386	0001070551	I	795	CCCTCAACAGTGATGAAGGAGACGTGTCTTGGATGGAGGAGCAGCTGTCC	20	+	18071477-18071526	20p11.23d	Homo sapiens CSRP2 binding protein (CSRP2BP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10924333] [evidence IPI]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Interacting selectively with a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions [goid 30274] [pmid 10924333] [evidence NAS]	PRO1194; dJ717M23.1; CRP2BP; MGC15388	PRO1194; dJ717M23.1; CRP2BP; MGC15388
Homo sapiens	RefSeq	NM_024548.2	ILMN_10437	CEP97	NM_024548.2	NM_024548.2		79598	31377704	NM_024548.2	CEP97	NP_078824.2	ILMN_1736951	0007400575	S	4116	CAGCCTCCCGAGTATCTGGGATTATAAGCAAGAGCCACTGCTCCCAGCTC	3	+	101485886-101485935	3q12.3a	Homo sapiens centrosomal protein 97kDa (CEP97), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17719545] [evidence IPI]	FLJ26462; FLJ23047; 2810403B08Rik; LRRIQ2	FLJ26462; 2810403B08Rik; FLJ23047; LRRIQ2
Homo sapiens	RefSeq	NM_001039367.1	ILMN_42430	ATP6V1E1	NM_001039367.1	NM_001039367.1		529	87159817	NM_001039367.1	ATP6V1E1	NP_001034456.1	ILMN_2339779	0005890450	A	1135	GAGGCTTAAGGCGCATGTGGCACACCACTCCTTCCAGCAGTAGTCGCTTT	22	-	18075033-18075082	22q11.21a	Homo sapiens ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 (ATP6V1E1), transcript variant 3, mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [pmid 8250920] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 8250920] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	ATP6E2; ATP6E; P31; ATP6V1E; Vma4	ATP6E2; ATP6E; P31; ATP6V1E; Vma4
Homo sapiens	RefSeq	NM_001696.2	ILMN_42430	ATP6V1E1	NM_001039367.1	NM_001039367.1		529	87159817	NM_001039367.1	ATP6V1E1	NP_001034456.1	ILMN_1798485	0006860543	S	1044	AGATGGTGGTTGCATGGGCTTCCTGGGTCTCCACTCTCCGTCTGGCCTAA	22	-	18075124-18075173	22q11.21a	Homo sapiens ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 (ATP6V1E1), transcript variant 3, mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [pmid 8250920] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 8250920] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	ATP6E2; ATP6E; P31; ATP6V1E; Vma4	ATP6E2; ATP6E; P31; ATP6V1E; Vma4
Homo sapiens	RefSeq	NM_021185.3	ILMN_22229	C19ORF15	NM_021185.3	NM_021185.3		57828	40556268	NM_021185.3	C19orf15	NP_067008.2	ILMN_1800031	0006110440	S	3288	TCCAGGATGACAGAGGACAGGGCTGAACCCAAGGAAGCCGTGGAGAGACA	19	+	43553210-43553259	19q13.2a	Homo sapiens chromosome 19 open reading frame 15 (C19orf15), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ46353; MGC125664; FLJ38899; DKFZP434A1022	FLJ46353; MGC125664; FLJ38899; DKFZP434A1022
Homo sapiens	RefSeq	XM_945017.1	ILMN_45215	LOC651923	XM_945017.1	XM_945017.1		651923	89037008	XM_945017.1	LOC651923	XP_950110.1	ILMN_1806967	0000290709	S	94	GACTATACCCAAGAGTACCAGAAAAACAGCATAGGAGCTGAATTTCCTAC					PREDICTED: Homo sapiens hypothetical protein LOC651923 (LOC651923), mRNA.					
Homo sapiens	RefSeq	NM_001033581.1	ILMN_21521	PRKCZ	NM_001033581.1	NM_001033581.1		5590	75709225	NM_001033581.1	PRKCZ	NP_001028753.1	ILMN_1662155	0004780681	I	233	CGCGCACAGAGCATAAAGAATCTGCGCTGAGGAGGCAGGAGAAGAAAGCC	1	+	1995178-1995227	1p36.33a	Homo sapiens protein kinase C, zeta (PRKCZ), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7925449] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7925449] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7925449] [evidence TAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10477520] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10770953] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4700] [pmid 8224878] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12893243] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11755531] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PKC2	PKC2
Homo sapiens	RefSeq	NM_194301.2	ILMN_12338	RALGAPA1	NM_014990.1	NM_014990.1		253959	51226123	NM_014990.1	RALGAPA1	NP_055805.1	ILMN_1741391	0006940465	A	7233	CTTCTTCCCAAAGCAATGTCTCATTTCTTGGCTGTGCAGGTGATGCCATG	14	-	36008139-36008188	14q13.2b	Homo sapiens Ral GTPase activating protein, alpha subunit 1 (catalytic) (RALGAPA1), transcript variant 1, mRNA.				TULIP1; GRIPE; DKFZp667F074; KIAA0884; DKFZp566D133	TULIP1; GRIPE; DKFZp667F074; KIAA0884; DKFZp566D133
Homo sapiens	RefSeq	XM_932673.1	ILMN_32645	LOC645141	XM_932673.1	XM_932673.1		645141	88992530	XM_932673.1	LOC645141	XP_937766.1	ILMN_1711310	0004070747	S	1084	GGCTTCTGAGGCTAGACCTAAGCTGTAGCAAATGCGATGTGCTTTGTGTG	6	+	18830418-18830467		PREDICTED: Homo sapiens hypothetical protein LOC645141 (LOC645141), mRNA.					
Homo sapiens	Unigene	Hs.544145	ILMN_107615	HS.544145	Hs.544145		Hs.544145		4174854	AI374864			ILMN_1916352	0000020370	S	172	CATAGGAAGAATCGCTATGTTGTTTACAGAAGTGAAAACTGGATGAGATG	5	-	44523708-44523757		ta60e04.x1 Soares_total_fetus_Nb2HF8_9w Homo sapiens cDNA clone IMAGE:2048478 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001010913.2	ILMN_29977	C1ORF140	NM_001010913.2	NM_001010913.2		400804	58332434	NM_001010913.2	C1orf140	NP_001010913.2	ILMN_1806635	0006770670	S	3995	TTAGCTTACTGCAGCCTCAACTTCCCTGGCATCAGGTGGCCTTCCCGCCT	1	-	219570340-219570389	1q41d	Homo sapiens chromosome 1 open reading frame 140 (C1orf140), mRNA.				FLJ46636	FLJ46636
Homo sapiens	RefSeq	XM_935381.1	ILMN_31439	LOC441282	XM_940782.2	XM_940782.2		441282	113419267	XM_940782.2	LOC441282	XP_945875.1	ILMN_1763999	0001850484	A	67	TCTCTTCTCGGCAAAGTGAAAGAAGCGGTGAAGGTGGCCATTGATGCAGA				7q33b	PREDICTED: Homo sapiens similar to aldo-keto reductase family 1, member B10, transcript variant 7 (LOC441282), mRNA.					
Homo sapiens	RefSeq	NM_005522.3	ILMN_28488	HOXA1	NM_005522.4	NM_005522.4		3198	84697023	NM_005522.4	HOXA1	NP_005513.1	ILMN_1700382	0002810139	I	536	GGTTATGCTGGGGGCGCGGTGGGCTCGCCTCAATACATTCACCACTCATA	7	-	27135040-27135089	7p15.2a	Homo sapiens homeobox A1 (HOXA1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7622051] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7622051] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	BSAS; HOX1; HOX1F; MGC45232	BSAS; HOX1; HOX1F; MGC45232
Homo sapiens	RefSeq	XM_930208.1	ILMN_34395	LOC653582	XM_930208.1	XM_930208.1		653582	89033820	XM_930208.1	LOC653582	XP_935301.1	ILMN_1808149	0000160113	S	195	TGGCACTGGGACTGAACTTATGCTGCCTGTCAAGATTATGTTCAGACATG	11	+	21262091-21262140		PREDICTED: Homo sapiens similar to isocitrate dehydrogenase 3, gamma (LOC653582), mRNA.					
Homo sapiens	RefSeq	XM_001725239.1	ILMN_339919	LOC100132410	XM_001725239.1	XM_001725239.1		100132410	169166246	XM_001725239.1	LOC100132410	XP_001725291.1	ILMN_3239541	0005860577	S	492	CTGTCACTCAAAAGCTGGCCTTCCTGACCGAGTCACCCGTCTGACACTCC	4	+	132891568-132891617	4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100132410 (LOC100132410), mRNA.					
Homo sapiens	RefSeq	XM_001726028.1	ILMN_345149	LOC100129162	XM_001726028.1	XM_001726028.1		100129162	169164028	XM_001726028.1	LOC100129162	XP_001726080.1	ILMN_3264711	0001770066	M	298	GAGAATCTGGTGTGGGAATTGTTAGCCATTCCAAACAACTACTGTACAAG				2p15b	PREDICTED: Homo sapiens similar to hCG1644578 (LOC100129162), mRNA.					
Homo sapiens	RefSeq	NM_012117.1	ILMN_25072	CBX5	NM_012117.1	NM_012117.1		23468	6912291	NM_012117.1	CBX5	NP_036249.1	ILMN_1813028	0007150685	S	174	TCAGAGGATGAGGAGGAGTATGTTGTGGAGAAGGTGCTAGACAGGCGCGT	12	-	52937613-52937662	12q13.13f	Homo sapiens chromobox homolog 5 (HP1 alpha homolog, Drosophila) (CBX5), mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 8663349] [evidence TAS]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [pmid 8663349] [evidence TAS]; A region in which centric, heterochromatic portions of one or more chromosomes form a compact structure [goid 10369] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 9636147] [evidence IDA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9636147] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15502821] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9864353] [evidence IPI]	HP1-ALPHA; HP1; HP1Hs-alpha	HP1Hs-alpha; HP1-ALPHA; HP1
Homo sapiens	RefSeq	NM_006541.1	ILMN_13525	TXNL2	NM_006541.1	NM_006541.1		10539	5730103	NM_006541.1	TXNL2	NP_006532.1	ILMN_1758084	0001300471	S	1557	AGGTTCTAGGGCTGGGAGCTGGGATTTGAACCAGGATCTGTCAGCGCAGC	10	+	131872430-131872479	10q26.3b	Homo sapiens thioredoxin-like 2 (TXNL2), mRNA.				PICOT	PICOT
Homo sapiens	RefSeq	XM_928907.1	ILMN_177714	LOC643854	XR_017219.1	XR_017219.1		643854	113417682	XR_017219.1	LOC643854		ILMN_1804861	0007160736	S	3694	GCTGACGAAACACCTGGCAAGATAGAGCTGTCCTAGGCCCTAAAACTCGC	6	-	132070641-132070690	6q23.2a	PREDICTED: Homo sapiens misc_RNA (LOC643854), miscRNA.					
Homo sapiens	Unigene	Hs.564657	ILMN_117281	HS.564657	Hs.564657		Hs.564657		6702620	AW295984			ILMN_1907221	0004830348	S	229	CTCAAAGATCTGGCAGCTAGTCAGTGTTCCTCTGTTGTTTGTTGCCTTGG	14	+	82283855-82283904		UI-H-BI2-ahu-g-08-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2728142 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006796.1	ILMN_29564	AFG3L2	NM_006796.1	NM_006796.1		10939	5802969	NM_006796.1	AFG3L2	NP_006787.1	ILMN_2066124	0001170538	S	2820	TGTGGCAGGGATCGTTGCACTGGACTCTTGGCGTGTGGGAAGGGATGCTT	18	-	12348317-12348366	18p11.21e	Homo sapiens AFG3 ATPase family gene 3-like 2 (yeast) (AFG3L2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10395799] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 10395799] [evidence TAS]	FLJ25993	FLJ25993
Homo sapiens	RefSeq	NM_001012755.1	ILMN_23831	MCART6	NM_001012755.3	NM_001012755.3		401612	153792374	NM_001012755.3	MCART6	NP_001012773.2	ILMN_1715745	0006840402	S	5682	CCACTGATGACACCGCTCCCTCCATCTTAGGTGTAGCCCCCATGCTGACT	X	-	103344390-103344439	Xq22.2b	Homo sapiens mitochondrial carrier triple repeat 6 (MCART6), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZp686O1267	DKFZp686O1267
Homo sapiens	RefSeq	XM_941219.1	ILMN_31343	LOC648801	XM_941219.1	XM_941219.1		648801	89057953	XM_941219.1	LOC648801	XP_946312.1	ILMN_1764814	0003840068	S	3428	CTTCCTGCTGGTTATTAGAAGGGCATGTGCCCCTTTTAGGAGGCATCTGC					PREDICTED: Homo sapiens hypothetical protein LOC648801 (LOC648801), mRNA.					
Homo sapiens	RefSeq	NM_198697.1	ILMN_11128	KRTAP12-3	NM_198697.2	NM_198697.2		386683	148727344	NM_198697.2	KRTAP12-3	NP_941970.2	ILMN_1714028	0003310468	S	233	CCATCATATATGTGACTCCCTCTTGCCAATCTTCGGGGTGCTGCCAGCCC	21	+	44902509-44902558	21q22.3d	Homo sapiens keratin associated protein 12-3 (KRTAP12-3), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KRTAP12.3	KRTAP12.3
Homo sapiens	RefSeq	NM_016009.2	ILMN_10394	SH3GLB1	NM_016009.2	NM_016009.2		51100	21359904	NM_016009.2	SH3GLB1	NP_057093.1	ILMN_1766045	0006960372	S	933	GGCTTCAACAAGTGGCCTAGTAATCACCTCTCCTTCCAACCTCAGTGACC	1	+	86980571-86980620	1p22.3c-p22.3b	Homo sapiens SH3-domain GRB2-like endophilin B1 (SH3GLB1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11161816] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids [goid 6654] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11161816] [evidence IDA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis [goid 51084] [evidence IEA]	Interacting selectively with fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 5504] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11161816] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA];  [goid 42171] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11161816] [evidence IPI]	dJ612B15.2; Bif-1; CGI-61; KIAA0491	dJ612B15.2; Bif-1; CGI-61; KIAA0491
Homo sapiens	Unigene	Hs.561363	ILMN_114820	HS.561363	Hs.561363		Hs.561363		19029962	BM716704			ILMN_1864001	0004730100	S	572	GGAGTGGAAACCCAGGACTGCCTGTCTGACTGCTGAATGGGTGCTTTGCG	5	-	141185864-141185913		UI-E-EJ0-ahg-n-20-0-UI.r2 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahg-n-20-0-UI 5, mRNA sequence					
Homo sapiens	Unigene	Hs.575808	ILMN_127989	HS.575808	Hs.575808		Hs.575808		34889261	CF552427			ILMN_1831826	0007160332	S	576	CTCTACTCCAACAAACTCCACCCTTACCCATGCCAGCAAAGACTGAGGGG	1	+	221644202-221644251		AGENCOURT_15595604 NIH_MGC_183 Homo sapiens cDNA clone IMAGE:30530228 5, mRNA sequence					
Homo sapiens	RefSeq	NR_031659.1	ILMN_388588	MIR1258	NR_031659.1	NR_031659.1		100302172	269847316	NR_031659.1	MIR1258		ILMN_3310543	0003940156	S	7	TTCCACGACCTAATCCTAACTCCTGCGAGTCCCTGGAGTTAGGATTAGGT					Homo sapiens microRNA 1258 (MIR1258), microRNA.					
Homo sapiens	RefSeq	XM_937277.1	ILMN_42457	LOC391475	XM_937277.1	XM_937277.1		391475	88959061	XM_937277.1	LOC391475	XP_942370.1	ILMN_1793300	0006100519	A	512	AATTCCTGTCTTGGGTCCAATCTGAGCCTCCCATCCTCCTGTGGCTCCCG				2q33.3b	PREDICTED: Homo sapiens similar to F15D3.1a (LOC391475), mRNA.					
Homo sapiens	RefSeq	XM_927274.1	ILMN_307336	STAG3L4	NM_022906.2	NM_022906.2		64940	148806903	NM_022906.2	STAG3L4	NP_075057.2	ILMN_1669851	0006380612	A	509	GCTTCTCAGACTCACAAGTCTGCGCCTTCTGTCACACTAGCACCCTGGCT	7	+	66411511-66411560	7q11.22a	Homo sapiens stromal antigen 3-like 4 (STAG3L4), mRNA.				FLJ13195	
Homo sapiens	RefSeq	XM_938125.1	ILMN_32465	KRT126P	XM_938125.2	XM_938125.2		643865	113423765	XM_938125.2	KRT126P	XP_943218.1	ILMN_1700344	0002490048	S	602	ACAGTATCATTGCCAAGTTGGGGGAGCAGCAGACCACGGCCAGCAGGCAT				12q13.13d	PREDICTED: Homo sapiens keratin 126 pseudogene (KRT126P), mRNA.					
Homo sapiens	RefSeq	NM_025214.1	ILMN_5333	CCDC68	NM_025214.1	NM_025214.1		80323	13376817	NM_025214.1	CCDC68	NP_079490.1	ILMN_1815326	0000830494	S	3413	CGAAACTGCCCTTGGTCGTTCCTGAGTGTGGGCCAAGCTAACTTTGGGAG	18	-	50720305-50720354	18q21.2d	Homo sapiens coiled-coil domain containing 68 (CCDC68), mRNA.				FLJ25368; SE57-1	FLJ25368; SE57-1
Homo sapiens	RefSeq	NM_025214.1	ILMN_5333	CCDC68	NM_025214.1	NM_025214.1		80323	13376817	NM_025214.1	CCDC68	NP_079490.1	ILMN_2203876	0003120504	S	3517	CCTGCCTCAGCCTCCCGAGTAGCTGTCTTTATAATACCATCAGCCTTATC	18	-	50720201-50720250	18q21.2d	Homo sapiens coiled-coil domain containing 68 (CCDC68), mRNA.				FLJ25368; SE57-1	FLJ25368; SE57-1
Homo sapiens	RefSeq	XM_372654.3	ILMN_32859	LOC390760	XM_372654.3	XM_372654.3		390760	89041164	XM_372654.3	LOC390760	XP_372654.3	ILMN_1722484	0007510438	S	534	AGGAGCCCTCAAGCGGCCCTTATGCGAGCACTCCACCGACTTTGACAAGC	17	+	7177259-7177287:7177674-7177694	17p13.1d	PREDICTED: Homo sapiens similar to protein phosphatase 1, regulatory (inhibitor) subunit 2 (LOC390760), mRNA.					
Homo sapiens	RefSeq	NM_003487.2	ILMN_18523	TAF15	NM_139215.1	NM_139215.1		8148	21327700	NM_139215.1	TAF15	NP_631961.1	ILMN_1678707	0000010176	A	1913	TTGCCAGAGTTTTGCCTGCTGCTTTCCTCGTGGCCTCTTCTTGGGTAGTG	17	+	31198110-31198159	17q12b	Homo sapiens TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa (TAF15), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TAFII68; TAF2N; RBP56; hTAFII68; Npl3	TAFII68; TAF2N; RBP56; hTAFII68; Npl3
Homo sapiens	RefSeq	NM_207453.1	ILMN_23705	FLJ35934	NM_207453.1	NM_207453.1		400579	46409529	NM_207453.1	FLJ35934	NP_997336.1	ILMN_1691966	0001410372	S	1710	CGCTGCCTACAGTCACGGAATGCCAAGGACAGCTGGAAACCACCAGAAGC	17	+	18258258-18258307	17p11.2f	Homo sapiens FLJ35934 protein (FLJ35934), mRNA.					
Homo sapiens	RefSeq	XM_001719581.1	ILMN_337819	LOC100130015	XM_001719581.1	XM_001719581.1		100130015	169210587	XM_001719581.1	LOC100130015	XP_001719633.1	ILMN_3179802	0000730441	A	210	CCAGCAGTGGGCGGAGCTGAGGACAAGCTACACAGACCCAGATGGTCACT				16q24.3b	PREDICTED: Homo sapiens hypothetical protein LOC100130015 (LOC100130015), mRNA.					
Homo sapiens	RefSeq	XM_937876.1	ILMN_34402	LOC341604	XM_937876.1	XM_937876.1		341604	89037171	XM_937876.1	LOC341604	XP_942969.1	ILMN_1653787	0000730682	A	204	CATCAGGAAATTCTGCAAGGGCAAGAGATGCGAGCCCCTGACCCTGAGGC				13q33.3a	PREDICTED: Homo sapiens similar to 60S ribosomal protein L35 (LOC341604), mRNA.					
Homo sapiens	RefSeq	XM_926587.1	ILMN_39945	LOC643227	XM_937637.1	XM_937637.1		643227	88999313	XM_937637.1	LOC643227	XP_942730.1	ILMN_1694738	0001240274	S	17	GCTCTGGAGCAAAAGTCCCTTACAATTTCCAACCATTGGAAGAACTCAAA				6q14.1a	PREDICTED: Homo sapiens similar to ubiquitin-conjugating enzyme E2 variant 1 (LOC643227), mRNA.					
Homo sapiens	RefSeq	NM_139171.1	ILMN_20727	STARD6	NM_139171.1	NM_139171.1		147323	21040260	NM_139171.1	STARD6	NP_631910.1	ILMN_1657044	0001850148	S	588	CCTCAATGCAAAAGATGGAATAAAGGCACACAGAACTCCATCAAGACGTG	18	-	51851087-51851136	18q21.2c	Homo sapiens StAR-related lipid transfer (START) domain containing 6 (STARD6), mRNA.		The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Homo sapiens	RefSeq	NM_147166.1	ILMN_17048	AKAP9	NM_147166.1	NM_147166.1		10142	22538388	NM_147166.1	AKAP9	NP_671695.1	ILMN_2396691	0003290592	A	3307	AGCTCTTTATTAGATGGAGTTGTGACCATGACAAGCAGGGGTGCTGAAGG	7	+	91470216-91470265	7q21.2a	Homo sapiens A kinase (PRKA) anchor protein (yotiao) 9 (AKAP9), transcript variant 4, mRNA.	A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 10202149] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9482789] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 10390370] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10390370] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9482789] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9482789] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	YOTIAO; MU-RMS-40.16A; HYPERION; AKAP450; AKAP350; CG-NAP; PRKA9; KIAA0803	YOTIAO; MU-RMS-40.16A; HYPERION; AKAP450; AKAP350; CG-NAP; PRKA9; KIAA0803
Homo sapiens	RefSeq	NM_032717.3	ILMN_14413	AGPAT9	NM_032717.3	NM_032717.3		84803	40255053	NM_032717.3	AGPAT9	NP_116106.2	ILMN_1794875	0002060477	S	2111	TCCTTGTTTGAATGCTGTAGATCTGTACCTAGTACCCCTCCCATCTACTG	4	+	84526603-84526652	4q21.23a	Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 9 (AGPAT9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MAG1; AGPAT8; LPAAT-theta; GPAT3; MGC11324	MAG1; AGPAT8; LPAAT-theta; GPAT3; MGC11324
Homo sapiens	RefSeq	NM_001031839.1	ILMN_180254	C8ORF49	NM_001031839.1	NM_001031839.1		606553	73611917	NM_001031839.1	C8orf49	NP_001027009.1	ILMN_1774884	0006760452	S	1521	CGTAGTCTCTGGTGCTGCCTCTTCAGGACGAATTTGCTGAAAGTGAGTTG	8	+	11657694-11657743	8p23.1a	Homo sapiens chromosome 8 open reading frame 49 (C8orf49), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ30972	FLJ30972
Homo sapiens	RefSeq	XM_933757.1	ILMN_30963	LOC646607	XM_933757.1	XM_933757.1		646607	88965805	XM_933757.1	LOC646607	XP_938850.1	ILMN_1713401	0000270255	S	503	AGCCGTGCCGCTGCTCCCCAGAGACAAGCTGCGTTAACATGAGGGTGTAT	3	+	139810941-139810990		PREDICTED: Homo sapiens hypothetical protein LOC646607 (LOC646607), mRNA.					
Homo sapiens	RefSeq	NM_006157.2	ILMN_2560	NELL1	NM_006157.2	NM_006157.2		4745	45269146	NM_006157.2	NELL1	NP_006148.1	ILMN_1745817	0001990731	S	2695	TCCACCTGAGGACGGTGTTTGGAGGTTGCCTTTTGGACCTACCACTTTGC	11	+	21553272-21553321	11p15.1a	Homo sapiens NEL-like 1 (chicken) (NELL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8975702] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ45906; IDH3GL; NRP1	FLJ45906; IDH3GL; NRP1
Homo sapiens	RefSeq	XM_931029.1	ILMN_38854	FRMD4B	XM_931029.1	XM_931029.1		23150	88963233	XM_931029.1	FRMD4B	XP_936122.1	ILMN_1663948	0001450278	I	1726	CCCGAGATGGTTATGGATGTTTAGAGGCCAGAGGGATGGGAGGAAATACC	3	-	69329604-69329653	3p14.1b	PREDICTED: Homo sapiens FERM domain containing 4B, transcript variant 2 (FRMD4B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]		
Homo sapiens	Unigene	Hs.568157	ILMN_120338	HS.568157	Hs.568157		Hs.568157		28277113	BC046381			ILMN_1849653	0003310040	S	2095	AGATCTGTTTTGTTCCTGCGTGGGGTCCCAGAACTACTTCCAGCAGCAAG	10	-	11153628-11153655:11153779-11153800		Homo sapiens hypothetical gene supported by BC046381, mRNA (cDNA clone IMAGE:4826362)					
Homo sapiens	RefSeq	XR_015259.2	ILMN_167080	LOC727984	XR_015259.2	XR_015259.2		727984	169167626	XR_015259.2	LOC727984		ILMN_3292056	0007320722	M	352	TGGGAACAAAGCACCTAAGATGTGCCCCTGGACCTACAGAGCTCATGGTC	5	+	55468914-55468963	5q11.2e	PREDICTED: Homo sapiens misc_RNA (LOC727984), miscRNA.					
Homo sapiens	RefSeq	NM_203463.1	ILMN_28310	LASS6	NM_203463.1	NM_203463.1		253782	45007001	NM_203463.1	LASS6	NP_982288.1	ILMN_1767662	0005690064	S	6066	CACAGGTCCATGAAAGTTTGGCTTCCTGGTTTGATGTCTGTTGCGTGGCC	2	+	169338911-169338960	2q24.3f	Homo sapiens LAG1 homolog, ceramide synthase 6 (LASS6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	CerS6; MGC129950; MGC129949	CerS6; MGC129950; MGC129949
Homo sapiens	RefSeq	NM_153686.4	ILMN_12683	LCORL	NM_153686.4	NM_153686.4		254251	34916053	NM_153686.4	LCORL	NP_710153.2	ILMN_2194882	0001940669	S	3385	AAATAGATGTTGAAAATACACGAATTTAGATACAAGCTTTAAAACCAGTT	4	-	17453969-17454018	4p15.32b	Homo sapiens ligand dependent nuclear receptor corepressor-like (LCORL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ30696; MLR1	FLJ30696; MLR1
Homo sapiens	RefSeq	NR_031641.1	ILMN_388568	MIR1243	NR_031641.1	NR_031641.1		100302188	269847236	NR_031641.1	MIR1243		ILMN_3308545	0006200730	S	18	TAGGAGTGAAATAAAGGTCCATCTCCTGCCTATTTATTACTTTGCTTTGG					Homo sapiens microRNA 1243 (MIR1243), microRNA.					
Homo sapiens	RefSeq	NM_018982.3	ILMN_19321	YIPF1	NM_018982.3	NM_018982.3		54432	40538797	NM_018982.3	YIPF1	NP_061855.1	ILMN_1803564	0001400133	S	1368	CCAGTGTCTGGATGGTGCCACACTGGCGCCTAATCACCCGTTTAACAAGC	1	-	54317792-54317841	1p32.3c	Homo sapiens Yip1 domain family, member 1 (YIPF1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]			FinGER1; DJ167A19.1	FinGER1; DJ167A19.1
Homo sapiens	RefSeq	NM_018982.3	ILMN_19321	YIPF1	NM_018982.3	NM_018982.3		54432	40538797	NM_018982.3	YIPF1	NP_061855.1	ILMN_2052163	0000020164	S	1646	CTACCTGGGGGATCCTCTTCTCTCCAAATGTTAGCCATCCTGAAGTAGCC	1	-	54317514-54317563	1p32.3c	Homo sapiens Yip1 domain family, member 1 (YIPF1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]			FinGER1; DJ167A19.1	FinGER1; DJ167A19.1
Homo sapiens	RefSeq	NM_017980.2	ILMN_18779	LIMS2	NM_017980.3	NM_017980.3		55679	142374166	NM_017980.3	LIMS2	NP_060450.2	ILMN_1760493	0004280010	S	1944	TTGTGTCGAGCCCTTGGGTGGGGCCAGGAGGAGGTGATGGCGTCAGAGGA	2	-	128112588-128112637	2q14.3e	Homo sapiens LIM and senescent cell antigen-like domains 2 (LIMS2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PINCH-2; FLJ10044	PINCH-2; FLJ10044
Homo sapiens	RefSeq	NM_022874.1	ILMN_8480	SMN1	NM_022874.1	NM_022874.1		6606	13259511	NM_022874.1	SMN1	NP_075012.1	ILMN_2351902	0006520608	A	529	CTGTGTTGTGGTTTACACTGGATATGGAAATAGAGAGGAGCAAAATCTGT	5	+	70274033-70274082	5q13.2b	Homo sapiens survival of motor neuron 1, telomeric (SMN1), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9845364] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [pmid 9845364] [evidence NAS]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [pmid 8670859] [evidence NAS]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9845364] [evidence NAS]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9323129] [evidence NAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8670859] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17023415] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]	SMNT; SMA2; SMN; SMA3; SMA@; SMA; BCD541; T-BCD541; SMA4; SMA1	SMNT; SMA2; SMN; SMA3; SMA@; SMA; BCD541; T-BCD541; SMA4; SMA1
Homo sapiens	RefSeq	NM_022874.1	ILMN_8480	SMN1	NM_022874.1	NM_022874.1		6606	13259511	NM_022874.1	SMN1	NP_075012.1	ILMN_2351893	0003840626	A	1140	TGTGAAATATTTTACTGGACTCTTTTGAAAAACCATCTGTAAAAGACTGG	5	+	70284206-70284255	5q13.2b	Homo sapiens survival of motor neuron 1, telomeric (SMN1), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9845364] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [pmid 9845364] [evidence NAS]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [pmid 8670859] [evidence NAS]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9845364] [evidence NAS]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9323129] [evidence NAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8670859] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17023415] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]	SMNT; SMA2; SMN; SMA3; SMA@; SMA; BCD541; T-BCD541; SMA4; SMA1	SMNT; SMA2; SMN; SMA3; SMA@; SMA; BCD541; T-BCD541; SMA4; SMA1
Homo sapiens	RefSeq	NM_004479.2	ILMN_2593	FUT7	NM_004479.2	NM_004479.2		2529	56090657	NM_004479.2	FUT7	NP_004470.1	ILMN_1724236	0005340324	S	2375	AAGTTTGTGGGGGCCAAACCTGGGACCCCGAGCTTCCTCGGTAGCAGAGG	9	-	139044606-139044655	9q34.3e	Homo sapiens fucosyltransferase 7 (alpha (1,3) fucosyltransferase) (FUT7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11698403] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8207002] [evidence TAS]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 11698403] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of L-fucose (6-deoxy-Lgalactose) [goid 42355] [pmid 11698403] [evidence NAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,3)-linkage [goid 46920] [pmid 11698403] [evidence TAS]		
Homo sapiens	RefSeq	XM_937321.1	ILMN_38724	LOC203510	XM_937321.1	XM_937321.1		203510	89060978	XM_937321.1	LOC203510	XP_942414.1	ILMN_1655659	0001580754	A	241	GTTGAGGGAGGCAAGAAGAAGGACCCTAATGCCCTCAAAAGGCCACTGTC				Xq23b	PREDICTED: Homo sapiens similar to high-mobility group box 3 (LOC203510), mRNA.					
Homo sapiens	RefSeq	NM_003024.2	ILMN_10540	ITSN1	NM_003024.2	NM_003024.2		6453	47717122	NM_003024.2	ITSN1	NP_003015.2	ILMN_1651848	0006420291	I	6315	AGCAGCAGTCGTTGCTGGTGACCTGTTCTGTGCTTGAATGTGCTGAATCC	21	+	34183355-34183404	21q22.11c	Homo sapiens intersectin 1 (SH3 domain protein) (ITSN1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Invagination of the axonal plasma membrane creating a membrane-bounded vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release [goid 48488] [pmid 9799604] [evidence TAS]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 9799604] [evidence NAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9799604] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12006984] [evidence IPI]	MGC134948; SH3D1A; SH3P17; MGC134949; ITSN	MGC134948; SH3D1A; SH3P17; MGC134949; ITSN
Homo sapiens	RefSeq	NM_001001132.1	ILMN_10540	ITSN1	NM_003024.2	NM_003024.2		6453	47717122	NM_003024.2	ITSN1	NP_003015.2	ILMN_1672741	0004850470	A	3757	GTACGACTACACCGCGCAGAATGACGATGAGCTGGCCTTCAACAAGGGCC	21	+	34130634-34130683	21q22.11c	Homo sapiens intersectin 1 (SH3 domain protein) (ITSN1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Invagination of the axonal plasma membrane creating a membrane-bounded vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release [goid 48488] [pmid 9799604] [evidence TAS]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 9799604] [evidence NAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9799604] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12006984] [evidence IPI]	MGC134948; SH3D1A; SH3P17; MGC134949; ITSN	MGC134948; SH3D1A; SH3P17; MGC134949; ITSN
Homo sapiens	RefSeq	XM_001716967.1	ILMN_340633	LOC100131871	XM_001716967.1	XM_001716967.1		100131871	169171729	XM_001716967.1	LOC100131871	XP_001717019.1	ILMN_3282517	0001340392	M	303	TATTTAGGCCCATACCCTACCTCACAGCAGTCTCCGCAGATGAGGCTACT				7p12.1c	PREDICTED: Homo sapiens hypothetical protein LOC100131871 (LOC100131871), mRNA.					
Homo sapiens	RefSeq	XM_942183.1	ILMN_33950	LOC652633	XM_942183.1	XM_942183.1		652633	89063391	XM_942183.1	LOC652633	XP_947276.1	ILMN_1744472	0007650356	S	32	GGGAAGCCCTGAGTCTGGAGCTGCACAGGAACATCATAACCAATGAGGAG					PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC652633), mRNA.					
Homo sapiens	RefSeq	NM_001239.2	ILMN_5670	CCNH	NM_001239.2	NM_001239.2		902	17738313	NM_001239.2	CCNH	NP_001230.1	ILMN_2187830	0001980242	S	1152	CCAAACATGAGGAGGAAGAATGGACTGATGACGACCTGGTAGAATCTCTC	5	-	86726014-86726018:86726019-86726057:86726617-86726622	5q14.3d	Homo sapiens cyclin H (CCNH), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7936635] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7799941] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7629134] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16782892] [evidence EXP]; A protein complex that phosphorylates cyclin-dependent kinases such as Cdc2 on Thr161 (or an equivalent residue); contains a catalytic subunit and a regulatory subunit, and some examples also include an assembly factor [goid 19907] [pmid 8692842] [evidence IDA]	The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 8692841] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	p34; CAK; p37	p34; CAK; p37
Homo sapiens	RefSeq	NM_001239.2	ILMN_5670	CCNH	NM_001239.2	NM_001239.2		902	17738313	NM_001239.2	CCNH	NP_001230.1	ILMN_1742250	0002570544	S	857	CCTTCCCAAATTGCCCTGACTGCCATTTTATCTAGTGCCTCCAGGGCTGG	5	-	86736424-86736473	5q14.3d	Homo sapiens cyclin H (CCNH), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7936635] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7799941] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7629134] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16782892] [evidence EXP]; A protein complex that phosphorylates cyclin-dependent kinases such as Cdc2 on Thr161 (or an equivalent residue); contains a catalytic subunit and a regulatory subunit, and some examples also include an assembly factor [goid 19907] [pmid 8692842] [evidence IDA]	The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 8692841] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	p34; CAK; p37	p34; CAK; p37
Homo sapiens	RefSeq	NM_002689.2	ILMN_173939	POLA2	NM_002689.2	NM_002689.2		23649	20127447	NM_002689.2	POLA2	NP_002680.2	ILMN_1696713	0004920537	S	2371	TCCAGAAGTAAGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAG	11	+	64821556-64821605	11q13.1c	Homo sapiens polymerase (DNA directed), alpha 2 (70kD subunit) (POLA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 6693436] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [evidence IEA]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8223465] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	FLJ37250; FLJ21662	FLJ21662; FLJ37250
Homo sapiens	RefSeq	NM_021073.2	ILMN_10608	BMP5	NM_021073.2	NM_021073.2		653	24797149	NM_021073.2	BMP5	NP_066551.1	ILMN_1660552	0002000471	S	1799	CGGGATCTGGGATGGCAGGACTGGATTATAGCACCAGAAGGATACGCTGC	6	-	55740266-55740315	6p12.1b	Homo sapiens bone morphogenetic protein 5 (BMP5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC34244	MGC34244
Homo sapiens	RefSeq	XR_039828.1	ILMN_344840	MYCNOS	XR_039828.1	XR_039828.1		10408	169163378	XR_039828.1	MYCNOS		ILMN_3226059	0002850292	A	1	ATGCAGCACCCACCCTGCGAGCCTGGCAATTGCTTGTCATTAAAAGAAAA	2	-	15997765-15997814	2p24.3a	PREDICTED: Homo sapiens misc_RNA (MYCNOS), miscRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1419902] [evidence TAS]			
Homo sapiens	RefSeq	NM_199126.1	ILMN_9003	ZNF585A	NM_199126.1	NM_199126.1		199704	40217791	NM_199126.1	ZNF585A	NP_954577.1	ILMN_1737211	0004210139	A	3965	ACGGTGGATGCTGTTAACTTTCTTCCTTCCCCTCAGGCAATGGCGGTGAC	19	-	42332922-42332971	19q13.12c	Homo sapiens zinc finger protein 585A (ZNF585A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ23765; FLJ31827	FLJ23765; FLJ31827
Homo sapiens	RefSeq	XM_928409.1	ILMN_174430	TMEM200C	NM_001080209.1	NM_001080209.1		645369	122692280	NM_001080209.1	TMEM200C	NP_001073678.1	ILMN_1710536	0004760689	S	1793	GGCCGAGCAACCTCAGCCGGTGCAGAGGCAGTTTACAAACAAGGAGAAAC	18	-	5890261-5890310	18p11.31b	Homo sapiens transmembrane protein 200C (TMEM200C), mRNA.					
Homo sapiens	RefSeq	NM_001080209.1	ILMN_174430	TMEM200C	NM_001080209.1	NM_001080209.1		645369	122692280	NM_001080209.1	TMEM200C	NP_001073678.1	ILMN_2236726	0002260164	I	1611	AGCTCCCAGTCGGATGACCCATCCAGCAGCAATAAGGGCTACACACCCCT	18	-	5890443-5890492	18p11.31b	Homo sapiens transmembrane protein 200C (TMEM200C), mRNA.					
Homo sapiens	Unigene	Hs.544375	ILMN_107793	HS.544375	Hs.544375		Hs.544375		10810150	BF056254			ILMN_1816781	0005130307	S	276	GGTTCATTTCTGAATCCTAGGTGAGTGGGTGCTATAAGCAAGAGTTGTGG	6	-	148528963-148529012		7k03b12.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:3443278 3, mRNA sequence					
Homo sapiens	RefSeq	XM_932442.1	ILMN_31288	LOC644846	XM_932442.1	XM_932442.1		644846	89060248	XM_932442.1	LOC644846	XP_937535.1	ILMN_1653573	0004670615	S	1	GGAGCTGATGCTGGCTAGAAGACCTGAGTCTTCCGAGAGGCAGCTTGATT	X	+	135549501-135549550		PREDICTED: Homo sapiens hypothetical protein LOC644846 (LOC644846), mRNA.					
Homo sapiens	RefSeq	NM_001704.1	ILMN_1159	BAI3	NM_001704.1	NM_001704.1		577	4502358	NM_001704.1	BAI3	NP_001695.1	ILMN_1671076	0005690301	S	4762	CAGGCTAGTGGAGAGATGACCAGGTGTACAGTTCTGACCATCCTGTGTTG	6	+	70155664-70155713	6q12g-q13a	Homo sapiens brain-specific angiogenesis inhibitor 3 (BAI3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 16527] [evidence IEA]	KIAA0550; MGC133100	KIAA0550; MGC133100
Homo sapiens	Unigene	Hs.492066	ILMN_96523	HS.492066	Hs.492066		Hs.492066		34364992	BX641068			ILMN_1829330	0006060156	S	3103	AGGAGGATCTCCAGGAAGGATCTTGCAGGCCTTGAACAAAAGTTCACTGG	8	+	79683851-79683900		Homo sapiens mRNA; cDNA DKFZp686G02263 (from clone DKFZp686G02263)					
Homo sapiens	RefSeq	NM_006884.1	ILMN_40044	SHOX2	NM_006884.2	NM_006884.2		6474	89145412	NM_006884.2	SHOX2	NP_006875.2	ILMN_1666777	0002000739	A	1665	CCCAGACGATTCTCGAGAGACTGGGGGGAGTTACCAACTTAAATGTGTGT	3	-	159297914-159297963	3q25.32b	Homo sapiens short stature homeobox 2 (SHOX2), transcript variant SHOX2a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9482898] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9482898] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 9482898] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IEA]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	OG12X; SHOT; OG12; OGI2X	OG12X; SHOT; OG12; OGI2X
Homo sapiens	RefSeq	NM_006884.1	ILMN_40044	SHOX2	NM_006884.2	NM_006884.2		6474	89145412	NM_006884.2	SHOX2	NP_006875.2	ILMN_1702979	0003360041	I	169	GTGAAGGAGAAGAAGGAGGCGATCACGTACCGGGAGGTGCTGGAGAGCGG	3	-	159306412-159306461	3q25.32b	Homo sapiens short stature homeobox 2 (SHOX2), transcript variant SHOX2a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9482898] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9482898] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 9482898] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process by which the anatomical structures of the digestive tract are generated and organized during embryonic development. The digestive tract is the tube extending from the mouth to the anus, including the pharynx, esophagus, stomach, and intestines [goid 48557] [evidence IEA]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	OG12X; SHOT; OG12; OGI2X	OG12X; SHOT; OG12; OGI2X
Homo sapiens	RefSeq	XM_497781.2	ILMN_38596	LOC391276	XM_497781.2	XM_497781.2		391276	89058167	XM_497781.2	LOC391276	XP_497781.2	ILMN_1702780	0004260626	A	106	GAGGCATCTACAGAGATGAGCCTAAGAGGATTCCAGTCAGTGGAAAGTGG	21	-	29197522-29197571	21q21.3c	PREDICTED: Homo sapiens similar to THUMP domain containing 1 (LOC391276), mRNA.					
Homo sapiens	RefSeq	XR_040818.1	ILMN_344060	ZNF818	XR_040818.1	XR_040818.1		390963	169214032	XR_040818.1	ZNF818		ILMN_3307312	0002320424	A	2382	CCTACAGATGTCATGAATGTGGCAAAGCCTTTACTCAAGGCTCACGCTTC				19q13.41b	PREDICTED: Homo sapiens misc_RNA (ZNF818), miscRNA.					
Homo sapiens	RefSeq	XM_943161.1	ILMN_36020	LOC650239	XM_943161.1	XM_943161.1		650239	89077360	XM_943161.1	LOC650239	XP_948254.1	ILMN_1674699	0005340379	I	145	AACCCTTGGCAGTGGGCTGGGTTCATCTTCTATTCTCTGCACTATATGAG					PREDICTED: Homo sapiens hypothetical protein LOC650239, transcript variant 2 (LOC650239), mRNA.					
Homo sapiens	RefSeq	NM_054027.3	ILMN_182515	ANKH	NM_054027.3	NM_054027.3		56172	34452701	NM_054027.3	ANKH	NP_473368.1	ILMN_1692080	0005130274	I	67	TCCCGGCAGATCTTTGTTGTGTGGGAGGGCAGCAGGGATGGACTTGAGCT	5	-	14924760-14924809	5p15.2a	Homo sapiens ankylosis, progressive homolog (mouse) (ANKH), mRNA. XM_944228	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites [goid 19867] [pmid 10894769] [evidence ISS]; The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites [goid 19867] [pmid 11326272] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10894769] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [pmid 10894769] [evidence NAS]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [pmid 10894769] [evidence ISS]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [pmid 11326272] [evidence TAS]	Catalysis of the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 5315] [pmid 11326272] [evidence IDA]; Catalysis of the transfer of inorganic diphosphate across a membrane [goid 30504] [pmid 11326272] [evidence IDA]	CPPDD; ANK; CMDJ; HANK; FLJ27166; CCAL2; MANK	CPPDD; ANK; CMDJ; HANK; FLJ27166; CCAL2; MANK
Homo sapiens	RefSeq	NM_032589.2	ILMN_22481	DSCR8	NM_203428.1	NM_203428.1		84677	44680116	NM_203428.1	DSCR8	NP_982252.1	ILMN_1763901	0004280132	A	33	TCCCACTTGGCAGGGGCCGTCTTGTCCACTCGTTTCTGTAAACATGGGTG	21	+	38415469-38415518	21q22.13b	Homo sapiens Down syndrome critical region gene 8 (DSCR8), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MTAG2; C21orf65; MMA-1	MTAG2; C21orf65; MMA-1
Homo sapiens	Unigene	Hs.540111	ILMN_104962	HS.540111	Hs.540111		Hs.540111		51646169	CR738291			ILMN_1836486	0005290497	S	267	CCTGTGCTGTTTCTCACTGAGCTGTGGTGTTTATGCCTTAAGTACCTGTG	14	-	19846958-19847007		CR738291 Homo sapiens library (Ebert L) Homo sapiens cDNA clone IMAGp971D2453 ; IMAGE:811744 5, mRNA sequence					
Homo sapiens	Unigene	Hs.571297	ILMN_123478	HS.571297	Hs.571297		Hs.571297		27880576	BX116657			ILMN_1841246	0004390719	S	65	GCTGAGAAGACAGGATGATGAAGTGCCCTGGGGGCCAGAGTCCAGACAAG	7	-	25837661-25837697:25837911-25837923		BX116657 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998O114104, mRNA sequence					
Homo sapiens	RefSeq	NR_029673.1	ILMN_387830	MIR130A	NR_029673.1	NR_029673.1		406919	262205274	NR_029673.1	MIR130A		ILMN_3308808	0005360180	S	8	GCCAGAGCTCTTTTCACATTGTGCTACTGTCTGCACCTGTCACTAGCAGT				11q12.1a	Homo sapiens microRNA 130a (MIR130A), microRNA.					
Homo sapiens	RefSeq	NM_000890.3	ILMN_178023	KCNJ5	NM_000890.3	NM_000890.3		3762	24797140	NM_000890.3	KCNJ5	NP_000881.3	ILMN_2137312	0002900181	S	2548	CAGTTGGCCCTGAAACAGGAATGGGGCAAAGAGAAAGGAGAGCCAGGAGC	11	+	128292810-128292859	11q24.3a	Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 5 (KCNJ5), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8834003] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8834003] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 15273] [pmid 8834003] [evidence TAS];  [goid 15467] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KIR3.4; CIR; KATP1; GIRK4	KIR3.4; CIR; KATP1; GIRK4
Homo sapiens	RefSeq	NM_003256.2	ILMN_9434	TIMP4	NM_003256.2	NM_003256.2		7079	48255910	NM_003256.2	TIMP4	NP_003247.1	ILMN_1663399	0001090326	S	1036	CTCCTTCCCTGCAGAGCTTTGGCCATTACCACCTGACCTCTTGCTGCCAG	3	-	12194911-12194960	3p25.2a	Homo sapiens TIMP metallopeptidase inhibitor 4 (TIMP4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [pmid 8939999] [evidence NAS]		
Homo sapiens	RefSeq	NM_000962.2	ILMN_163172	PTGS1	NM_000962.2	NM_000962.2		5742	18104966	NM_000962.2	PTGS1	NP_000953.2	ILMN_1665100	0006840626	I	1366	TCCATGTTGGTGGACTATGGGGTTGAGGCCCTGGTGGATGCCTTCTCTCG	9	+	124188767-124188816	9q33.2b	Homo sapiens prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) (PTGS1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence ISS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 1907252] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [pmid 9630216] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PCOX1; PHS1; PGHS1; COX1; PGHS-1; PGG/HS; PTGHS; COX3	PCOX1; PGHS1; PGHS-1; PGG/HS; PHS1; COX1; PTGHS; COX3
Homo sapiens	Unigene	Hs.98330	ILMN_74482	HS.98330	Hs.98330		Hs.98330		51472836	XM_373670			ILMN_1850238	0000380301	S	466	GGGGCAGCATTGTCAGACTTTCCGGGTTGACCCGCTGTTGGGAGTCCTTT					PREDICTED: Homo sapiens hypothetical LOC388227 (LOC388227), mRNA					
Homo sapiens	RefSeq	NM_173073.2	ILMN_14894	SLC35C2	NM_015945.10	NM_015945.10		51006	34335287	NM_015945.10	SLC35C2	NP_057029.8	ILMN_1754235	0004230437	A	1840	ATAAATGGTTCACGGTCCACTGGCCGCCTTGTGTTGCTGGAGACGTGGGG	20	-	44978553-44978602	20q13.12c	Homo sapiens solute carrier family 35, member C2 (SLC35C2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		FLJ37039; BA394O2.1; OVCOV1; MGC39183; CGI-15; C20orf5; MGC32079; MGC20633	FLJ37039; BA394O2.1; OVCOV1; MGC39183; CGI-15; C20orf5; MGC32079; MGC20633
Homo sapiens	RefSeq	NM_006367.2	ILMN_175047	CAP1	NM_006367.2	NM_006367.2		10487	10938021	NM_006367.2	CAP1	NP_006358.1	ILMN_1797604	0001070754	S	2276	GTGCCTGTCACCTGTCTTCACTGCCTCCTTTTCCCTGTCATGCTCATCAG	1	+	40310581-40310630	1p34.2d	Homo sapiens CAP, adenylate cyclase-associated protein 1 (yeast) (CAP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]	The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 1406678] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1406678] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 7962207] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	CAP1-PEN; CAP	CAP1-PEN; CAP
Homo sapiens	Unigene	Hs.563020	ILMN_115982	HS.563020	Hs.563020		Hs.563020		20365035	BQ189484			ILMN_1888988	0005870626	S	299	CGTGGTCTCTCATCCTCAGCAGCATAGCCTGAGCTTTATGCACAGTAGCC	20	+	17786008-17786057		UI-E-EJ1-aka-e-09-0-UI.r1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-aka-e-09-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_182569.1	ILMN_172818	GDPD1	NM_182569.1	NM_182569.1		284161	32698961	NM_182569.1	GDPD1	NP_872375.1	ILMN_2106265	0004780403	S	1516	AGACTATTGGATACATTTGGCATTGGGCTGAGTGTGGTGGCTCATGCCTG	17	+	54706350-54706399	17q22d	Homo sapiens glycerophosphodiester phosphodiesterase domain containing 1 (GDPD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ27503; UGPQ; FLJ37451; MGC35046; GDE4	FLJ27503; UGPQ; FLJ37451; MGC35046; GDE4
Homo sapiens	RefSeq	NM_001105659.1	ILMN_335396	LRRIQ3	NM_001105659.1	NM_001105659.1		127255	157785648	NM_001105659.1	LRRIQ3	NP_001099129.1	ILMN_3241661	0005890709	S	2704	GAAGACAGGGAAAAGACAGAGGAGAGAAGCAAGAGACAACCCATATAATT	1	-	74491810-74491859	1p31.1h	Homo sapiens leucine-rich repeats and IQ motif containing 3 (LRRIQ3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC22773	MGC22773
Homo sapiens	RefSeq	NM_001031740.1	ILMN_11393	MANEAL	NM_001031740.1	NM_001031740.1		149175	72534765	NM_001031740.1	MANEAL	NP_001026910.1	ILMN_1662147	0001470603	A	1976	TTTAGCTCTAGGGAGAGGACTAGGAGGAAATCCCCCTCCCTTTAGCTGCC	1	+	38039260-38039309	1p34.3b	Homo sapiens mannosidase, endo-alpha-like (MANEAL), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP11-109P14.3; MGC78681; FLJ31434	RP11-109P14.3; MGC78681; FLJ31434
Homo sapiens	RefSeq	NM_001031740.1	ILMN_11393	MANEAL	NM_001031740.1	NM_001031740.1		149175	72534765	NM_001031740.1	MANEAL	NP_001026910.1	ILMN_1709605	0004880008	I	744	GGCCTTCCACATCCAACCCTACAAGGGCCGGGATGACATCACTGTACATG	1	+	38035005-38035054	1p34.3b	Homo sapiens mannosidase, endo-alpha-like (MANEAL), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP11-109P14.3; MGC78681; FLJ31434	RP11-109P14.3; MGC78681; FLJ31434
Homo sapiens	RefSeq	NM_004090.2	ILMN_180655	DUSP3	NM_004090.2	NM_004090.2		1845	37655179	NM_004090.2	DUSP3	NP_004081.1	ILMN_1797522	0006560156	S	3634	CCATGGTGATGGATGGTTTGGAAAGGGAATGTTGGTGCCTTTTGTGCCAC	17	-	39199431-39199480	17q21.31b	Homo sapiens dual specificity phosphatase 3 (vaccinia virus phosphatase VH1-related) (DUSP3), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 17322878] [evidence EXP]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1281549] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 1281549] [evidence TAS]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 17322878] [evidence EXP]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	VHR	VHR
Homo sapiens	RefSeq	XM_938339.1	ILMN_32561	LOC399715	XM_938339.1	XM_938339.1		399715	89031782	XM_938339.1	LOC399715	XP_943432.1	ILMN_1795467	0006770064	I	2715	ACATGGTGAGCAGGTATCCTATGTCCCGAGGAAGCCCATTCCACCTGAGC				10p15.1a	PREDICTED: Homo sapiens FLJ46311 protein (LOC399715), mRNA.					
Homo sapiens	RefSeq	XR_000585.1	ILMN_176885	LOC401242	XR_017782.1	XR_017782.1		401242	113417963	XR_017782.1	LOC401242		ILMN_1683054	0004390017	A	2491	GTGCGAGGCACATCAAAGTTCTGGGGAATGACTTAGGCACAACCAAATGG				6p22.1b	PREDICTED: Homo sapiens misc_RNA (LOC401242), miscRNA.					
Homo sapiens	RefSeq	NM_013346.2	ILMN_14112	SNX12	NM_013346.2	NM_013346.2		29934	23111029	NM_013346.2	SNX12	NP_037478.2	ILMN_1759003	0006100273	S	280	CGGCGGCGCTACAGTGACTTTGAGTGGCTGAAAAATGAGCTGGAGAGAGA	X	-	70282710-70282759	Xq13.1c	Homo sapiens sorting nexin 12 (SNX12), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	MGC118982; MGC118983	MGC118982; MGC118983
Homo sapiens	RefSeq	XM_001725676.1	ILMN_334294	LOC100129191	XM_001725676.1	XM_001725676.1		100129191	169209907	XM_001725676.1	LOC100129191	XP_001725728.1	ILMN_3252359	0003390035	M	445	TGCATGGGAAGGGCTTAGGGCAGAACTCGGACCACATCCAGTGCCTGAGG	16	-	30753528-30753577	16p11.2c	PREDICTED: Homo sapiens hypothetical LOC100129191 (LOC100129191), mRNA.					
Homo sapiens	RefSeq	NM_000942.4	ILMN_25884	PPIB	NM_000942.4	NM_000942.4		5479	44890060	NM_000942.4	PPIB	NP_000933.1	ILMN_1703622	0002900112	S	364	CGGAAAGACTGTTCCAAAAACAGTGGATAATTTTGTGGCCTTAGCTACAG	15	-	64454244-64454293	15q22.31a	Homo sapiens peptidylprolyl isomerase B (cyclophilin B) (PPIB), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 2000394] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 1530944] [evidence NAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [pmid 2000394] [evidence NAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 2000394] [evidence TAS]	MGC14109; MGC2224; CYP-S1; SCYLP; CYPB	MGC14109; MGC2224; CYP-S1; SCYLP; CYPB
Homo sapiens	RefSeq	NM_007240.1	ILMN_22100	DUSP12	NM_007240.1	NM_007240.1		11266	6005955	NM_007240.1	DUSP12	NP_009171.1	ILMN_1767892	0000460280	S	899	GTTGGGTTCCTTCAACTGGTATGGTGAACAGTGCTCTTGTGGTAGGTGGA	1	+	159993226-159993275	1q23.3b	Homo sapiens dual specificity phosphatase 12 (DUSP12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10446167] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 10446167] [evidence TAS]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10446167] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	YVH1; DUSP1	YVH1; DUSP1
Homo sapiens	RefSeq	NM_001025374.1	ILMN_12607	IIP45	NM_001025374.1	NM_001025374.1		60672	70778865	NM_001025374.1	IIP45	NP_001020545.1	ILMN_1803911	0007200671	I	1329	ACCTGGGTTCCTGGCTCAGGGAGAGCTGTGGCTTCTCATGGGCCTCGCAG	1	+	12012359-12012408	1p36.22a	Homo sapiens invasion inhibitory protein 45 (IIP45), transcript variant 2, mRNA.				FLJ38609; FLJ12438	FLJ38609; FLJ12438
Homo sapiens	RefSeq	NM_001012455.1	ILMN_365641	ZSCAN23	NM_001012455.1	NM_001012455.1		222696	190883485	NM_001012455.1	ZSCAN23	NP_001012458.1	ILMN_3244501	0006900026	S	2526	CCCTGTCTCCTACTTCCTAGTGTAACATTCTATTAAGCCACTGGAGGCAT	6	-	28401017-28401066	6p22.1b	Homo sapiens zinc finger and SCAN domain containing 23 (ZSCAN23), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_018022.1	ILMN_443	TMEM51	NM_018022.1	NM_018022.1		55092	8922276	NM_018022.1	TMEM51	NP_060492.1	ILMN_1674985	0000380102	S	1593	CTACGCTGGAGTCCTGAACTGTGGGTAGAAAACACGACCTGGCTTTGTAG	1	+	15419242-15419291	1p36.21a	Homo sapiens transmembrane protein 51 (TMEM51), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ10199; C1orf72	FLJ10199; C1orf72
Homo sapiens	RefSeq	XM_001724639.1	ILMN_336321	LOC727945	XM_001724639.1	XM_001724639.1		727945	169168725	XM_001724639.1	LOC727945	XP_001724691.1	ILMN_3277199	0006370537	M	1270	GGTGGCTCAAATGTAGGTGACTGTGATGGGACAGCCTGTGGGTACAACAC				6q12b	PREDICTED: Homo sapiens similar to hCG1651100 (LOC727945), mRNA.					
Homo sapiens	RefSeq	NM_199353.1	ILMN_5611	PRB1	NM_199353.1	NM_199353.1		5542	41349483	NM_199353.1	PRB1	NP_955385.1	ILMN_2350301	0004010224	A	324	AACCACAAGGACCACCCCCACAAGGAGGAAAGCCACAAGGACCACCCCCA	12	-	11397568-11397591:11397991-11398016	12p13.2b	Homo sapiens proline-rich protein BstNI subfamily 1 (PRB1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ps 1; PMF; PRB1L; Ps 2; PM; PMS; PRB1M	Ps 1; PMF; PRB1L; Ps 2; PM; PMS; PRB1M
Homo sapiens	RefSeq	XM_932550.1	ILMN_5611	PRB1	NM_199353.1	NM_199353.1		5542	41349483	NM_199353.1	PRB1	NP_955385.1	ILMN_1672828	0003130475	A	9	TTGGGAGTGACTCCAGAGCCTCCTGCAAGATGCTGTTGATTCTGCTGTCA	12	-	11399733-11399754:11399755-11399782	12p13.2b	Homo sapiens proline-rich protein BstNI subfamily 1 (PRB1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ps 1; PMF; PRB1L; Ps 2; PM; PMS; PRB1M	
Homo sapiens	RefSeq	NM_016497.2	ILMN_7338	MRPL51	NM_016497.2	NM_016497.2		51258	16950606	NM_016497.2	MRPL51	NP_057581.2	ILMN_2097421	0004780689	S	359	GCACCCCAAAGAACTGATCAGGGGGCCCATATGGCTTCGAGGTTGGAAAG	12	-	6471831-6471880	12p13.31d	Homo sapiens mitochondrial ribosomal protein L51 (MRPL51), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	bMRP64; MRP64; HSPC241; CDA09	bMRP64; MRP64; HSPC241; CDA09
Homo sapiens	RefSeq	NM_194448.1	ILMN_19122	CLEC4A	NM_194447.2	NM_194447.2		50856	148536835	NM_194447.2	CLEC4A	NP_919429.2	ILMN_1709204	0002570022	A	508	TTGGCAAGACAGTGAGAAGGACTGTGCTAGAATGGAGGCTCACCTGCTGG	12	+	8179527-8179576	12p13.31b	Homo sapiens C-type lectin domain family 4, member A (CLEC4A), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10438934] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10438934] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10438934] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 10438934] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	DCIR; DDB27; LLIR; HDCGC13P; CLECSF6	DCIR; LLIR; HDCGC13P; DDB27; CLECSF6
Homo sapiens	RefSeq	NM_006895.2	ILMN_179818	HNMT	NM_006895.2	NM_006895.2		3176	66932961	NM_006895.2	HNMT	NP_008826.1	ILMN_2284744	0007100121	I	3185	TGTTGTGGATCTCTCAGTGTTTAACATGGTGCCTTGCATATGGTAAATGC	2	+	138490222-138490271	2q22.1b	Homo sapiens histamine N-methyltransferase (HNMT), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 7943261] [evidence TAS]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histamine = S-adenosyl-L-homocysteine + Nt-methylhistamine [goid 46539] [evidence IEA]	HNMT-S2; HMT; HNMT-S1	HMT; HNMT-S2; HNMT-S1
Homo sapiens	RefSeq	NR_031651.1	ILMN_388574	MIR1249	NR_031651.1	NR_031651.1		100302149	269847272	NR_031651.1	MIR1249		ILMN_3308773	0007150328	S	13	AGATGGGCCAAGTTCCCTCTGGCTGGAACGCCCTTCCCCCCCTTCTTCAC					Homo sapiens microRNA 1249 (MIR1249), microRNA.					
Homo sapiens	RefSeq	NM_002779.3	ILMN_22468	PSD	NM_002779.3	NM_002779.3		5662	56790298	NM_002779.3	PSD	NP_002770.3	ILMN_1806242	0002190543	S	4034	TTACTCTTTCTCTTGCTGGAGGTGGAGGAAGGGCGTCCATGCCAAGGCCC	10	-	104165156-104165205	10q24.32b	Homo sapiens pleckstrin and Sec7 domain containing (PSD), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	KIAA2011; TYL	KIAA2011; TYL
Homo sapiens	RefSeq	XM_928049.1	ILMN_41435	LOC644973	XM_928049.1	XM_928049.1		644973	88978511	XM_928049.1	LOC644973	XP_933142.1	ILMN_1722620	0005560181	S	2443	CCAGCATCTCCTGGACAGTCAGCCGAGTGTTTCCATGATACCAGCCATAC	4	-	75088-75137		PREDICTED: Homo sapiens hypothetical protein LOC644973 (LOC644973), mRNA.					
Homo sapiens	RefSeq	NM_178822.3	ILMN_15444	IGSF10	NM_178822.3	NM_178822.3		285313	38490687	NM_178822.3	IGSF10	NP_849144.2	ILMN_1682100	0005960647	S	7293	GCCAGTTATTCTTACCTATGCACCAGGGACAGTAAAAGGCATCAGTGGAG	3	-	152637696-152637745	3q25.1c	Homo sapiens immunoglobulin superfamily, member 10 (IGSF10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ25972; CMF608	FLJ25972; CMF608
Homo sapiens	Unigene	Hs.31532	ILMN_72286	HS.31532	Hs.31532		Hs.31532		34527067	AK130294			ILMN_1902658	0002060014	S	4703	CGCCCCTATCCAGCAGGAAGCAGCCAGATGATCAACGACGCCCTTTTTCC	X	-	62563495-62563544		Homo sapiens cDNA FLJ26784 fis, clone PRS04220					
Homo sapiens	RefSeq	NR_024378.1	ILMN_372124	NCRNA00051	NR_024378.1	NR_024378.1		619434	211971043	NR_024378.1	NCRNA00051		ILMN_3249356	0004180025	S	798	GGGACCTTTCAACACTATCGCAAGGGTGATTAGGTGCTGATGGCTCTGCC	8	+	143290116-143290165		Homo sapiens non-protein coding RNA 51 (NCRNA00051), non-coding RNA.					
Homo sapiens	RefSeq	XM_937293.1	ILMN_43772	LOC653103	XM_937293.2	XM_937293.2		653103	113430635	XM_937293.2	LOC653103	XP_942386.1	ILMN_1733674	0002710228	S	264	GCGCATGACCAGGAACCGGGCGCAGATGCTCGCGAACCAGAGCAAGCAGG				Xq27.3d	PREDICTED: Homo sapiens similar to Ankyrin repeat domain-containing protein 11 (Ankyrin repeat-containing cofactor 1) (LOC653103), mRNA.					
Homo sapiens	RefSeq	XM_927226.1	ILMN_42618	LOC642921	XM_927226.2	XM_927226.2		642921	113420849	XM_927226.2	LOC642921	XP_932319.1	ILMN_1669057	0003400327	S	2070	ACCCAAACCGTGGCTCACGTCACACCAAGAACCCTCTCTGACCTGGGTCT	9	-	98735416-98735465	9q22.33a	PREDICTED: Homo sapiens hypothetical LOC642921 (LOC642921), mRNA.					
Homo sapiens	RefSeq	XM_496319.2	ILMN_46664	LOC648217	XM_496319.3	XM_496319.3		648217	113428372	XM_496319.3	LOC648217	XP_496319.1	ILMN_1666694	0007100324	S	320	CTCAGACTCTAATTCAACACGGAATGTTGAGCTTCTGAGCGTGATATAGC	19	+	57338010-57338059	19q13.33e	PREDICTED: Homo sapiens similar to ribosomal protein L37 (LOC648217), mRNA.					
Homo sapiens	RefSeq	XR_039005.1	ILMN_351421	LOC644496	XR_039005.1	XR_039005.1		644496	169198896	XR_039005.1	LOC644496		ILMN_3294741	0000290414	M	192	GGCTGCCTTTTTCCTGGGAATTGCCTCAGCTGCTCTAACACGTGACCACA				10q11.23b	PREDICTED: Homo sapiens misc_RNA (LOC644496), miscRNA.					
Homo sapiens	RefSeq	NM_013983.1	ILMN_1553	NRG2	NM_013983.1	NM_013983.1		9542	7669531	NM_013983.1	NRG2	NP_053586.1	ILMN_2337880	0001260452	A	2686	AGGACTTACTACTCACTGGACAGCCACAGCACGCGGGCCAGCAGCAGACA	5	-	139235264-139235313	5q31.3a	Homo sapiens neuregulin 2 (NRG2), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9168114] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9168115] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	Don-1; NTAK; HRG2	Don-1; NTAK; HRG2
Homo sapiens	RefSeq	XM_001724353.1	ILMN_334357	C9ORF70	XM_001724353.1	XM_001724353.1		84850	169180090	XM_001724353.1	C9orf70	XP_001724405.1	ILMN_3252418	0001570121	M	499	TCCCCTGCCCGAAAAGACTGCCCCAACTGTAACCTTCCACTACCTATCCC	9	+	3891099-3891148	9p24.2a	PREDICTED: Homo sapiens chromosome 9 open reading frame 70 (C9orf70), mRNA.					
Homo sapiens	RefSeq	XM_001718761.1	ILMN_334592	LOC100132464	XM_001718761.1	XM_001718761.1		100132464	169202485	XM_001718761.1	LOC100132464	XP_001718813.1	ILMN_3230464	0006560259	I	81	CGAGACCCCAGCGAGACCTGCAGAACATTACAGCAGAATGAAGGAGAGCC	11	-	1661792-1661840:1662000-1662000	11p15.5b	PREDICTED: Homo sapiens hypothetical protein LOC100132464 (LOC100132464), mRNA.					
Homo sapiens	RefSeq	NM_004622.2	ILMN_14998	TSN	NM_004622.2	NM_004622.2		7247	20302160	NM_004622.2	TSN	NP_004613.1	ILMN_1768913	0006620554	S	3298	GAGAACTTAAGTGGCTAAAGAGATGAGACAAACATGCAGGTCGCTACTGG	2	+	122241789-122241838	2q14.3a	Homo sapiens translin (TSN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7663511] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 7663511] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	REHF-1; TRSLN; BCLF-1	REHF-1; TRSLN; BCLF-1
Homo sapiens	RefSeq	NR_030266.1	ILMN_387968	MIR376A2	NR_030266.1	NR_030266.1		664615	262205686	NR_030266.1	MIR376A2		ILMN_3309674	0002510367	S	10	AGGTAGATTTTCCTTCTATGGTTACGTGTTTGATGGTTAATCATAGAGGA				14q32.31a	Homo sapiens microRNA 376a-2 (MIR376A2), microRNA.					
Homo sapiens	RefSeq	NM_006085.3	ILMN_167520	BPNT1	NM_006085.4	NM_006085.4		10380	116812594	NM_006085.4	BPNT1	NP_006076.4	ILMN_1712718	0005360039	S	1019	GGAGTCCTGGCCACACTGAGGAATTATGACTACTATGCAAGCCGAGTTCC	1	-	220232216-220232265	1q41d	Homo sapiens 3'(2'), 5'-bisphosphate nucleotidase 1 (BPNT1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10224133] [evidence EXP]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 10224133] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10224133] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate [goid 8441] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate [goid 8441] [pmid 10224133] [evidence TAS]; Catalysis of the reaction: adenosine 3',5'-bisphosphate + H2O = adenosine 5'-phosphate + phosphate [goid 8441] [pmid 10224133] [evidence EXP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]	PIP	PIP
Homo sapiens	RefSeq	XM_945803.1	ILMN_45881	QKI	XM_945803.1	XM_945803.1		9444	88999420	XM_945803.1	QKI	XP_950896.1	ILMN_1698749	0006960528	I	19	TTAGATGAACTAACAAGTCCATATTATACCGGTTAGGAAGGAGCTCGGGC				6q26c	PREDICTED: Homo sapiens quaking homolog, KH domain RNA binding (mouse), transcript variant 6 (QKI), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]		
Homo sapiens	RefSeq	NM_032476.2	ILMN_17239	MRPS6	NM_032476.2	NM_032476.2		64968	34304325	NM_032476.2	MRPS6	NP_115865.1	ILMN_1723874	0006400195	S	867	AATACCTCCTGGGATTGTGAGCTAGTCATTCAGCCTGTGTAACCATGTGG	21	+	34437081-34437130	21q22.11c	Homo sapiens mitochondrial ribosomal protein S6 (MRPS6), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [pmid 11279123] [evidence NAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11279123] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11279123] [evidence NAS]	RPMS6; C21orf101; MRP-S6	RPMS6; C21orf101; MRP-S6
Homo sapiens	RefSeq	XM_940915.1	ILMN_42621	LOC390414	XM_940915.1	XM_940915.1		390414	89031778	XM_940915.1	LOC390414	XP_946008.1	ILMN_1727153	0002630477	A	2532	CTCACCATTTGTAAGGGAGGAGTGCCTCTGCCCAGCCCCTGCACCGTCTG				10p11.22c	PREDICTED: Homo sapiens similar to Nuclear envelope pore membrane protein POM 121 (Pore membrane protein of 121 kDa) (LOC390414), mRNA.					
Homo sapiens	RefSeq	XM_927325.1	ILMN_30608	LOC644099	XM_940205.1	XM_940205.1		644099	89057423	XM_940205.1	LOC644099	XP_945298.1	ILMN_1663252	0006250068	S	1	ATGCATGGCCAGCAGACCCTCAGCACTGCCACCCTTGCTTCCCCAAATGA					PREDICTED: Homo sapiens similar to ovo-like 2 isoform A (LOC644099), mRNA.					
Homo sapiens	RefSeq	NM_147164.1	ILMN_12225	CNTFR	NM_147164.1	NM_147164.1		1271	22212917	NM_147164.1	CNTFR	NP_671693.1	ILMN_1725910	0000510669	I	182	GTCACCTCATCTTGCCCCCTTGGTTTTGGAAGTCCTGAAGAGTTGGTCTG	9	-	34581142-34581191	9p13.3c	Homo sapiens ciliary neurotrophic factor receptor (CNTFR), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [pmid 1648265] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1648265] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 7585948] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4897] [pmid 7585948] [evidence TAS]; Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [pmid 15272019] [evidence IPI]	MGC1774	MGC1774
Homo sapiens	RefSeq	NM_001007527.1	ILMN_25092	LMBRD2	NM_001007527.1	NM_001007527.1		92255	56790896	NM_001007527.1	LMBRD2	NP_001007528.1	ILMN_1810652	0006560142	S	2436	CAGGAAGGTATCAGCCTGGTGGACGATATCTCTCGATGTCTCGCAGTGAC	5	-	36147045-36147094	5p13.2c	Homo sapiens LMBR1 domain containing 2 (LMBRD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp686G1057; MGC125693; MGC125692; DKFZp434H2226	DKFZp686G1057; MGC125693; MGC125692; DKFZp434H2226
Homo sapiens	RefSeq	NM_001007527.1	ILMN_25092	LMBRD2	NM_001007527.1	NM_001007527.1		92255	56790896	NM_001007527.1	LMBRD2	NP_001007528.1	ILMN_2075829	0005900477	S	3108	CTTCAAGTGATGCGTGTCTGTGTATTTAGCATGTGTACTATAATCAGGTG	5	-	36140994-36141043	5p13.2c	Homo sapiens LMBR1 domain containing 2 (LMBRD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp686G1057; MGC125693; MGC125692; DKFZp434H2226	DKFZp686G1057; MGC125693; MGC125692; DKFZp434H2226
Homo sapiens	RefSeq	NM_031208.1	ILMN_24688	FAHD1	NM_031208.2	NM_031208.2		81889	141803562	NM_031208.2	FAHD1	NP_112485.1	ILMN_1741462	0005090592	I	1130	CCTTCAAGAAAACGTGAAGTAGAACGGGTGGGCCAGAAATGAAAACAGGC	16	+	1818355-1818404	16p13.3e	Homo sapiens fumarylacetoacetate hydrolase domain containing 1 (FAHD1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	C16orf36; YISKL; DKFZp566J2046; MGC74876	YISKL; C16orf36; DKFZp566J2046; MGC74876
Homo sapiens	RefSeq	NM_177400.1	ILMN_21749	NKX6-2	NM_177400.2	NM_177400.2		84504	149773526	NM_177400.2	NKX6-2	NP_796374.1	ILMN_1786989	0004880446	S	835	GATCACGCGGCTGCTCAAGAAGCACAAACCCTCGAACTTGGCGCTGGTCA	10	-	134598454-134598503	10q26.3e	Homo sapiens NK6 homeobox 2 (NKX6-2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11210186] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11210186] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11210186] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	NKX6.2; MGC126684; NKX6B; GTX	MGC126684; GTX; NKX6.2; NKX6B; NKX6.1
Homo sapiens	RefSeq	NM_207386.1	ILMN_26049	FLJ45455	NM_207386.1	NM_207386.1		388336	46409395	NM_207386.1	FLJ45455	NP_997269.1	ILMN_1732584	0004200292	S	1339	AAAGCCATACCCCCGGGGACACAGCCCCGATGGCCTGGTCCAATACACTT	17	+	11402488-11402537	17p13.1a-p12d	Homo sapiens FLJ45455 protein (FLJ45455), mRNA.					
Homo sapiens	RefSeq	NM_005310.2	ILMN_163351	GRB7	NM_005310.2	NM_005310.2		2886	71979664	NM_005310.2	GRB7	NP_005301.2	ILMN_1798582	0001110762	I	140	TTCCTAGACGGAGCCAGACTTCGGAACGGGTGTCCTGCTACTCCTGCTGG	17	+	35147852-35147901	17q12c	Homo sapiens growth factor receptor-bound protein 7 (GRB7), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 9710451] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9710451] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15806159] [evidence IPI]		
Homo sapiens	RefSeq	NM_005310.2	ILMN_163351	GRB7	NM_005310.2	NM_005310.2		2886	71979664	NM_005310.2	GRB7	NP_005301.2	ILMN_1740762	0000450368	A	1995	TTGCCTCCCTCAGATAGAAAACAGCCCCCACTCCAGTCCACTCCTGACCC	17	+	35156822-35156871	17q12c	Homo sapiens growth factor receptor-bound protein 7 (GRB7), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 9710451] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9710451] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15806159] [evidence IPI]		
Homo sapiens	RefSeq	NR_003672.2	ILMN_371358	SNHG7	NR_003672.2	NR_003672.2		84973	215422346	NR_003672.2	SNHG7		ILMN_3227023	0006760021	A	295	GGGAAGCCTGGACGTCTGCTCACTGGAGATGACACGTGCGTGGGGTGTTG	9	-	139621498-139621538:139622333-139622341		Homo sapiens small nucleolar RNA host gene 7 (non-protein coding) (SNHG7), transcript variant 1, non-coding RNA.					
Homo sapiens	RefSeq	NR_003672.2	ILMN_371358	SNHG7	NR_003672.2	NR_003672.2		84973	215422346	NR_003672.2	SNHG7		ILMN_3233205	0006280433	I	1751	TGTCCTGCAGTGCCTGGGACGCCCCGTAGTGAAGAGTGATGTGGCCCAAA	9	-	139620042-139620091		Homo sapiens small nucleolar RNA host gene 7 (non-protein coding) (SNHG7), transcript variant 1, non-coding RNA.					
Homo sapiens	RefSeq	NM_001080508.1	ILMN_171448	TBX18	NM_001080508.1	NM_001080508.1		9096	122937455	NM_001080508.1	TBX18	NP_001073977.1	ILMN_2298577	0004180296	I	3683	TGGGGAAAGGTGTTAAGAATGAGTCCATCTCAGCCAATAGTGCTTGGTGT	6	-	85501213-85501262	6q14.3b	Homo sapiens T-box 18 (TBX18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IEA]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9888994] [evidence NAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Homo sapiens	RefSeq	XM_943618.1	ILMN_171448	TBX18	NM_001080508.1	NM_001080508.1		9096	122937455	NM_001080508.1	TBX18	NP_001073977.1	ILMN_1808457	0002350332	A	835	GACGATCTTTCTCCCATCAAGCCTGTTCCATCCGGGGAGGGAGTAAAGGC	6	-	85514411-85514460	6q14.3b	Homo sapiens T-box 18 (TBX18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IEA]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9888994] [evidence NAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Homo sapiens	RefSeq	NM_022065.3	ILMN_22705	THADA	NM_022065.4	NM_022065.4		63892	145301573	NM_022065.4	THADA	NP_071348.3	ILMN_1706818	0004480259	I	3973	ATAGAATGACAGGGAGAGAGTTTTTCTCTCGTTTCCCAGAACTCTATCCT	2	-	43676643-43676689:43712373-43712375	2p21e-p21d	Homo sapiens thyroid adenoma associated (THADA), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	GITA; FLJ44016; KIAA1767; FLJ44876; FLJ21877; FLJ77530	GITA; FLJ44016; KIAA1767; FLJ44876; FLJ21877
Homo sapiens	RefSeq	NM_198554.1	ILMN_22705	THADA	NM_022065.4	NM_022065.4		63892	145301573	NM_022065.4	THADA	NP_071348.3	ILMN_1811624	0001580719	A	5765	GTCAGAGCAGTGCCACCTCCTGTCTCAGTTCTTCAGAGAGCTTCCACCAG	2	-	43655231-43655280	2p21e-p21d	Homo sapiens thyroid adenoma associated (THADA), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	GITA; FLJ44016; KIAA1767; FLJ44876; FLJ21877; FLJ77530	GITA; FLJ44016; KIAA1767; FLJ44876; FLJ21877
Homo sapiens	RefSeq	NM_145748.1	ILMN_17461	TXNRD2	NM_145748.1	NM_145748.1		10587	22035669	NM_145748.1	TXNRD2	NP_665691.1	ILMN_1653904	0004860767	I	84	CCCCTTGCCTGCCTTCCTCGCCAGTAGCTTGCAGAGTAGACACGATGACA	22	-	18299943-18299992	22q11.21c	Homo sapiens thioredoxin reductase 2 (TXNRD2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10215850] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion [goid 305] [pmid 10455115] [evidence TAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the reaction: thioredoxin + NADP+ = thioredoxin disulfide + NADPH + H+ [goid 4791] [evidence ISS]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a disulfide group [goid 16654] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a disulfide group [goid 16654] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a disulfide group [goid 16654] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a disulfide group [goid 16654] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]	TRXR2; TR3; SELZ; TR; TR-BETA	TRXR2; TR; TR-BETA; TR3; SELZ
Homo sapiens	RefSeq	XR_015852.1	ILMN_162522	LOC728971	XR_015852.1	XR_015852.1		728971	113412854	XR_015852.1	LOC728971		ILMN_3305999	0005890196	M	597	CGTCTGGATCGGCAAACACTGATGTTTGATGGCAAGCAACTGGAAGATGA	2	+	47964206-47964255	2p16.3d	PREDICTED: Homo sapiens misc_RNA (LOC728971), miscRNA.					
Homo sapiens	RefSeq	NM_020457.2	ILMN_17509	THAP11	NM_020457.2	NM_020457.2		57215	40354196	NM_020457.2	THAP11	NP_065190.2	ILMN_1780699	0006580370	S	1638	GGTGCAGCCTGTGATTCTGATGGGGACTGGTAAATCTGTGCCTCTGCCTC	16	+	66435351-66435400	16q22.1b	Homo sapiens THAP domain containing 11 (THAP11), mRNA.				CTG-B43a; HRIHFB2206; CTG-B45d	CTG-B43a; HRIHFB2206; CTG-B45d
Homo sapiens	RefSeq	NM_001004463.1	ILMN_164883	OR10G7	NM_001004463.1	NM_001004463.1		390265	52218829	NM_001004463.1	OR10G7	NP_001004463.1	ILMN_1814562	0001780452	S	786	CTCCAGGGACGCCTTGCATGGGGTTGTGGCCGTTTTCTACACCACGCTGA	11	-	123908873-123908922	11q24.1c	Homo sapiens olfactory receptor, family 10, subfamily G, member 7 (OR10G7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-283	OR11-283
Homo sapiens	RefSeq	NR_024361.1	ILMN_371678	FLJ10661	NR_024361.1	NR_024361.1		286042	211938422	NR_024361.1	FLJ10661		ILMN_3233739	0004060373	I	1181	GCATCAGCAGCGTGCGTGAGCAGATGCGCCAGCAAGATAGCAAAAGCAGG	8	+	8102134-8102183	8p23.1e	Homo sapiens family with sequence similarity 86, member A pseudogene (FLJ10661), transcript variant 2, non-coding RNA. XR_015555 XR_040164					
Homo sapiens	RefSeq	NM_005497.2	ILMN_177188	GJC1	NM_001080383.1	NM_001080383.1		10052	122939171	NM_001080383.1	GJC1	NP_001073852.1	ILMN_1687023	0001230739	S	1366	CGGGAGAAGAAGGCCAAAGTGGGGTCCAAAGCTGGGTCCAACAAAAGCAC	17	-	42882040-42882089	17q21.31c-q21.31d	Homo sapiens gap junction protein, gamma 1, 45kDa (GJC1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7966354] [evidence NAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 7966354] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a junction between cells [goid 7043] [pmid 7966354] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IEA]		DKFZp686P0738; GJA7; CX45	DKFZp686P0738; CX45
Homo sapiens	RefSeq	NM_178463.2	ILMN_181531	C20ORF166	NM_178463.2	NM_178463.2		128826	51371944	NM_178463.2	C20orf166	NP_848558.1	ILMN_1789950	0004540403	S	890	CCGGCTCGGCACGTGGTCAGCTCCAAGTCAGCCCTGAAATGTCCATTACT	20	+	60572743-60572752:60578096-60578135	20q13.33c	Homo sapiens chromosome 20 open reading frame 166 (C20orf166), mRNA.				MGC129808; dJ353C17.1; FLJ32423	MGC129808; dJ353C17.1; FLJ32423
Homo sapiens	RefSeq	NM_016427.2	ILMN_9597	TCEB3B	NM_016427.2	NM_016427.2		51224	45439356	NM_016427.2	TCEB3B	NP_057511.2	ILMN_1774705	0005220088	S	2748	CAGGTGTCATGTGCTGGCCCTGTGATTTTGCCTCCCACACCCAGCCACTA	18	-	44559191-44559240	18q21.1b	Homo sapiens transcription elongation factor B polypeptide 3B (elongin A2) (TCEB3B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10692460] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [pmid 10692460] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TCEB3L; ELOA2; MGC119351; HsT832	TCEB3L; ELOA2; MGC119351; HsT832
Homo sapiens	RefSeq	XM_001721978.1	ILMN_347841	LOC131691	XM_001721978.1	XM_001721978.1		131691	169165349	XM_001721978.1	LOC131691	XP_001722030.1	ILMN_3290562	0007510674	M	313	CCCAACGCAAATGGTTCCCAGTTTTTCATGTGCCCTGCCAAGACCAAGTG				3p14.2c	PREDICTED: Homo sapiens similar to peptidyl-Pro cis trans isomerase (LOC131691), mRNA.					
Homo sapiens	RefSeq	XM_929706.1	ILMN_35509	LOC653781	XM_929706.2	XM_929706.2		653781	113413199	XM_929706.2	LOC653781	XP_934799.2	ILMN_1731816	0005720132	S	2098	TGCCCCAGGCAGCAGGGCATGATGGGGGGCATGCATCAGAAAGAGTCCTA	2	+	131130901-131130950	2q21.1c	PREDICTED: Homo sapiens similar to Prostate, ovary, testis expressed protein on chromosome 2 (LOC653781), mRNA.					
Homo sapiens	RefSeq	NM_021066.2	ILMN_10419	HIST1H2AJ	NM_021066.2	NM_021066.2		8331	15718715	NM_021066.2	HIST1H2AJ	NP_066544.1	ILMN_1755318	0005820754	S	345	GCTGCTGCCAAAGAAAACTGAGAGCCACCACAAGACTAAGTAAAGACCGA	6	-	27890103-27890110:27890111-27890152	6p22.1c	Homo sapiens histone cluster 1, H2aj (HIST1H2AJ), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]	H2AFE; dJ160A22.4; H2A/E	H2AFE; dJ160A22.4; H2A/E
Homo sapiens	RefSeq	NM_006879.2	ILMN_21265	MDM2	NM_002392.2	NM_002392.2		4193	46488903	NM_002392.2	MDM2	NP_002383.2	ILMN_1814208	0004150113	A	198	AGGGCGTCGTGCTTCCGCGCGCCCCGTGAAGGAAACTGGGGAGTCTTGAG	12	+	67488444-67488493	12q15b	Homo sapiens Mdm2 p53 binding protein homolog (mouse) (MDM2), transcript variant MDM2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [pmid 12915590] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12915590] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10707090] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11331603] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10707090] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11715018] [evidence EXP]	Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9271120] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 12915590] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10608892] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7791904] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 9450543] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [pmid 9153395] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9450543] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10722742] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA];  [goid 17163] [pmid 9271120] [evidence IDA];  [goid 17163] [evidence ISS]; Interacting selectively with any enzyme [goid 19899] [pmid 15577914] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17936559] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hdm2; HDMX; MGC71221	hdm2; HDMX; MGC71221
Homo sapiens	RefSeq	NM_002392.2	ILMN_21265	MDM2	NM_002392.2	NM_002392.2		4193	46488903	NM_002392.2	MDM2	NP_002383.2	ILMN_1736829	0000630600	I	1234	CCCCCCTTCCATCACATTGCAACAGATGTTGGGCCCTTCGTGAGAATTGG	12	+	67519358-67519407	12q15b	Homo sapiens Mdm2 p53 binding protein homolog (mouse) (MDM2), transcript variant MDM2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [pmid 12915590] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12915590] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10707090] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11331603] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10707090] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11715018] [evidence EXP]	Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9271120] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 12915590] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10608892] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7791904] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 9450543] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [pmid 9153395] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with one of the p53 family of proteins [goid 2039] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9450543] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10722742] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA];  [goid 17163] [pmid 9271120] [evidence IDA];  [goid 17163] [evidence ISS]; Interacting selectively with any enzyme [goid 19899] [pmid 15577914] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17936559] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hdm2; HDMX; MGC71221	hdm2; HDMX; MGC71221
Homo sapiens	RefSeq	NM_001090.2	ILMN_179040	ABCF1	NM_001025091.1	NM_001025091.1		23	69354670	NM_001025091.1	ABCF1	NP_001020262.1	ILMN_1763875	0007380113	A	3124	GCCCAAGATTTGGTGCCTGCAGCCTCTTGTCTGGTTGAGGACTTGGGGCA	6	+	30558969-30559018	6p21.33b	Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1 (ABCF1), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 9790762] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9790762] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9790762] [evidence TAS]; Functions during translation by binding nucleic acids during polypeptide synthesis at the ribosome [goid 8135] [pmid 9790762] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 9790762] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	ABC27; ABC50	ABC27; ABC50
Homo sapiens	RefSeq	NM_001025091.1	ILMN_179040	ABCF1	NM_001025091.1	NM_001025091.1		23	69354670	NM_001025091.1	ABCF1	NP_001020262.1	ILMN_2392635	0002190273	A	2905	GTGAGGTTCCATCCAGCCAAGTTTATGTGGCCTATTGTCTCAGGACTCTC	6	+	30558750-30558799	6p21.33b	Homo sapiens ATP-binding cassette, sub-family F (GCN20), member 1 (ABCF1), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 9790762] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9790762] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9790762] [evidence TAS]; Functions during translation by binding nucleic acids during polypeptide synthesis at the ribosome [goid 8135] [pmid 9790762] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 9790762] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	ABC27; ABC50	ABC27; ABC50
Homo sapiens	RefSeq	NM_001001520.1	ILMN_8472	HDGF2	NM_001001520.1	NM_001001520.1		84717	48255930	NM_001001520.1	HDGF2	NP_001001520.1	ILMN_1681927	0006840373	A	1900	AATGGCGAGGCCACATCACAGAAGGGGGAGAGCGCAGAGGACAAGGAGCA	19	+	4452205-4452254	19p13.3d	Homo sapiens hepatoma-derived growth factor-related protein 2 (HDGF2), transcript variant 1, mRNA.				MGC2641	MGC2641
Homo sapiens	RefSeq	NM_001001520.1	ILMN_8472	HDGF2	NM_001001520.1	NM_001001520.1		84717	48255930	NM_001001520.1	HDGF2	NP_001001520.1	ILMN_2325978	0006900037	A	1561	AGCCCGGACGTGAAGAGGTGCCTGAATGCCCTAGAGGAGCTGGGAACCCT	19	+	4449368-4449373:4449811-4449854	19p13.3d	Homo sapiens hepatoma-derived growth factor-related protein 2 (HDGF2), transcript variant 1, mRNA.				MGC2641	MGC2641
Homo sapiens	RefSeq	NM_001029866.2	ILMN_7407	CCT8L1	NM_001029866.2	NM_001029866.2		155100	156139123	NM_001029866.2	CCT8L1	NP_001025037.1	ILMN_3239249	0000360546	S	1590	CCTTGGCAGAGAATGCAGGCTTAGCTGTCTCAGACGTGGTTGCAGAAATG	7	+	151774846-151774895	7q36.1e	Homo sapiens chaperonin containing TCP1, subunit 8 (theta)-like 1 (CCT8L1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Homo sapiens	RefSeq	XM_936033.1	ILMN_30976	LOC641975	XM_936033.1	XM_936033.1		641975	89026881	XM_936033.1	LOC641975	XP_941126.1	ILMN_1783427	0000770082	S	652	GAGAGTAATGAGGGGACATCAAGGCGTAATGAGGGGACGTCAGAAGGCGG					PREDICTED: Homo sapiens hypothetical protein LOC641975 (LOC641975), mRNA.					
Homo sapiens	RefSeq	NR_031712.1	ILMN_388631	MIR720	NR_031712.1	NR_031712.1		100302198	269847550	NR_031712.1	MIR720		ILMN_3310608	0006220735	S	3	GATCTCACACGGTGGTGTTAATATCTCGCTGGGGCCTCCAAAATGTTGTG					Homo sapiens microRNA 720 (MIR720), microRNA.					
Homo sapiens	RefSeq	NM_201284.1	ILMN_15848	EGFR	NM_201284.1	NM_201284.1		1956	41327735	NM_201284.1	EGFR	NP_958441.1	ILMN_1728858	0003390538	I	2621	ATGGCCCCAGTCCATGCTTCTAGCCTTGGTTCCTTCTGCCCCTCTGTTTG	7	+	55205654-55205703	7p11.2c	Homo sapiens epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) (EGFR), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9103388] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12828935] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12435727] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 14702346] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8845374] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8493579] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15475003] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10567358] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10648629] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10734310] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10913131] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11823423] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11894095] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12218189] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12593796] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14560030] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14665621] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15574420] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16407834] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8639530] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9356464] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15465819] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9544989] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles [goid 30122] [pmid 14702346] [evidence TAS]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 12925580] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 12828935] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7736574] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 12435727] [evidence IDA]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 12435727] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 12435727] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 12435727] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 15082764] [evidence IDA]; A series of molecular signals that leads to the upregulation of calcium-dependent phospholipase A2 activity in response to the signal [goid 43006] [pmid 12435727] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [pmid 10572067] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [pmid 12828935] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 10572067] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IEA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [pmid 12435727] [evidence IMP]; Any process that modulates the activity of the enzyme nitric-oxide synthase [goid 50999] [pmid 12828935] [evidence IDA]; The process by which a protein is incorporated into a biological membrane [goid 51205] [pmid 12435727] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 6325948] [evidence NAS];  [goid 4710] [pmid 15542601] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7736574] [evidence IDA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [evidence IEA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 12435727] [evidence IDA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 6325948] [evidence NAS]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 2790960] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Modulates the activity of nitric oxide synthase [goid 30235] [pmid 12828935] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16777603] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10572067] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 14702346] [evidence IDA]	ERBB1; HER1; ERBB; mENA; PIG61	ERBB1; HER1; ERBB; mENA; PIG61
Homo sapiens	RefSeq	NM_207395.1	ILMN_4605	ZNF324B	NM_207395.1	NM_207395.1		388569	46409421	NM_207395.1	ZNF324B	NP_997278.1	ILMN_1700766	0000770019	S	2811	ACCCAGTGTGATGGGCCTGCATGGCAGAGACAAAAGGGTAGACTGGGGGT	19	+	63660827-63660876	19q13.43c	Homo sapiens zinc finger protein 324B (ZNF324B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ45850	FLJ45850
Homo sapiens	RefSeq	NM_001040661.1	ILMN_168015	SLC29A4	NM_001040661.1	NM_001040661.1		222962	100913033	NM_001040661.1	SLC29A4	NP_001035751.1	ILMN_2325056	0001440593	A	2846	CCGGCCATTAAAAGATGAAGGCAGACCGCTGCACCGCCGCCTGCAAAAAA	7	+	5310185-5310230:5322561-5322564	7p22.1c	Homo sapiens solute carrier family 29 (nucleoside transporters), member 4 (SLC29A4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other [goid 5337] [evidence IEA]	PMAT; FLJ34923; ENT4	PMAT; FLJ34923; ENT4
Homo sapiens	RefSeq	NM_019593.2	ILMN_22068	RP5-1022P6.2	NM_019593.3	NM_019593.3		56261	153218549	NM_019593.3	RP5-1022P6.2	NP_062539.1	ILMN_1701111	0003360553	S	3032	CTTGCATCTGTGGTGCTAGGTGAGTATGAGAAGATGTCAAGGACTGGACG	20	-	5527816-5527865	20p12.3c	Homo sapiens hypothetical protein KIAA1434 (RP5-1022P6.2), mRNA.		The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]	RP5-1022P6.2; PREI4; MGC26147; FLJ11085	RP5-1022P6.2; MGC26147; FLJ11085
Homo sapiens	RefSeq	NM_207322.1	ILMN_28522	C2CD4A	NM_207322.2	NM_207322.2		145741	147903291	NM_207322.2	C2CD4A	NP_997205.2	ILMN_1769925	0001030605	S	1345	GTCCCGTTTCAGTACAACACTGGCAGAGATGATTCTAGATTAACTATCCC	15	+	60148308-60148357	15q22.2b	Homo sapiens C2 calcium-dependent domain containing 4A (C2CD4A), mRNA.				DKFZp686O2263; NLF1	
Homo sapiens	RefSeq	NM_182908.3	ILMN_25760	DHRS2	NM_182908.3	NM_182908.3		10202	40548401	NM_182908.3	DHRS2	NP_878912.1	ILMN_1725726	0002850020	A	1333	GGAGCCTGAGGGGGTGTCTAGGTGATCATTTGGATCTGGAGGCAGAGTCT	14	+	23184343-23184351:23184352-23184392	14q11.2g	Homo sapiens dehydrogenase/reductase (SDR family) member 2 (DHRS2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1847869] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 11997086] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11944995] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11997086] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 8207] [pmid 7556196] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 1847869] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 16685466] [evidence IDA]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [pmid 11944995] [evidence IEP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 16685466] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: R-CHOH-R' + NADP+ = R-CO-R' + NADPH + H+ [goid 4090] [pmid 16685466] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	HEP27	HEP27
Homo sapiens	RefSeq	NM_182908.3	ILMN_25760	DHRS2	NM_182908.3	NM_182908.3		10202	40548401	NM_182908.3	DHRS2	NP_878912.1	ILMN_2384857	0004890671	A	1418	CATGCTAGGCTTGAGGAAGAAGAAAAACGCTTCGGCATTCTCCTTAGGAC	14	+	23184428-23184477	14q11.2g	Homo sapiens dehydrogenase/reductase (SDR family) member 2 (DHRS2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1847869] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 11997086] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11944995] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11997086] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 8207] [pmid 7556196] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 1847869] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 16685466] [evidence IDA]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [pmid 11944995] [evidence IEP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 16685466] [evidence IDA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: R-CHOH-R' + NADP+ = R-CO-R' + NADPH + H+ [goid 4090] [pmid 16685466] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	HEP27	HEP27
Homo sapiens	RefSeq	NM_000103.2	ILMN_13712	CYP19A1	NM_000103.2	NM_000103.2		1588	13904857	NM_000103.2	CYP19A1	NP_000094.2	ILMN_2387860	0003120348	A	1821	TGCTCCTGTTCACACCAGAGAACCAGGCTACAAGAGAAAAAGCAGAGGCC	15	-	49290079-49290128	15q21.2b	Homo sapiens cytochrome P450, family 19, subfamily A, polypeptide 1 (CYP19A1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2848247] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [pmid 15583024] [evidence EXP]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [pmid 2848247] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 2848247] [evidence TAS]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 2848247] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [pmid 1371509] [evidence TAS]	P-450AROM; ARO; ARO1; CYP19; MGC104309; CYAR; CPV1	P-450AROM; ARO; ARO1; CYP19; MGC104309; CYAR; CPV1
Homo sapiens	RefSeq	NM_178817.3	ILMN_23154	MRAP	NM_178817.3	NM_178817.3		56246	45827702	NM_178817.3	MRAP	NP_848932.1	ILMN_1705676	0004070341	I	857	GACAAAGATTGCAGTGGCCCCTCGAGTGCAGAGGTCATCCCAGGTGTTGC	21	+	32606329-32606378	21q22.11b	Homo sapiens melanocortin 2 receptor accessory protein (MRAP), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FGD2; C21orf61; B27; GCCD2; FALP	FGD2; C21orf61; B27; GCCD2; FALP
Homo sapiens	RefSeq	NM_001295.2	ILMN_23929	CCR1	NM_001295.2	NM_001295.2		1230	53759124	NM_001295.2	CCR1	NP_001286.1	ILMN_1678833	0007320176	S	2246	GGGGTGAGATTCTGTGTTGATGTAGGAGGCCGAGAAGGCCCTTAACTCAA	3	-	46243580-46243629	3p21.31i	Homo sapiens chemokine (C-C motif) receptor 1 (CCR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15001559] [evidence IMP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15474493] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7505609] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 15474493] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 7683036] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10734056] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10910894] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 7505609] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10734056] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10734056] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15474493] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15001559] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15474493] [evidence IPI]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	HM145; MIP1aR; CKR-1; CD191; CMKBR1; SCYAR1	HM145; MIP1aR; CKR-1; CD191; CMKBR1; SCYAR1
Homo sapiens	RefSeq	NM_013953.3	ILMN_6456	PAX8	NM_013953.3	NM_013953.3		7849	81295803	NM_013953.3	PAX8	NP_039247.1	ILMN_2319292	0004850070	A	3667	GGGACACTCTGTACCCCCGGCAGACCCTTTCCAACTCACAACCAATAAAG	2	-	113973602-113973651	2q13d	Homo sapiens paired box 8 (PAX8), transcript variant PAX8D, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISS]	The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9590296] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10377248] [evidence TAS]; Combining with thyroid-stimulating hormone to initiate a change in cell activity [goid 4996] [pmid 9590296] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISS]		
Homo sapiens	RefSeq	XM_001726444.1	ILMN_342598	LOC100128667	XM_001726444.1	XM_001726444.1		100128667	169206967	XM_001726444.1	LOC100128667	XP_001726496.1	ILMN_3185313	0001580176	A	241	TGCCATGGGTCCGATGCACTGGCCCAAGCCGCCATCTCCCGCCTCATACA	14	-	99051137-99051186	14q32.2b	PREDICTED: Homo sapiens hypothetical protein LOC100128667 (LOC100128667), mRNA.					
Homo sapiens	RefSeq	XM_001718291.1	ILMN_349519	LOC100127961	XM_001718291.1	XM_001718291.1		100127961	169169623	XM_001718291.1	LOC100127961	XP_001718343.1	ILMN_3269797	0001070437	M	362	CAAACAGAATCCGGAGGAGCCCCTTATGGTCCCGCTGCCACAAACAAGGC	6	-	36916834-36916883	6p21.2c	PREDICTED: Homo sapiens hypothetical LOC100127961 (LOC100127961), mRNA.					
Homo sapiens	RefSeq	NM_139017.3	ILMN_5213	IL31RA	NM_139017.4	NM_139017.4		133396	115430247	NM_139017.4	IL31RA	NP_620586.3	ILMN_1667575	0002470626	S	2166	CAATACCTACGTTCGAGGATGCCAGAGGGGACCCGCCCAGAAGCCAAAGA	5	+	55206440-55206489	5q11.2e	Homo sapiens interleukin 31 receptor A (IL31RA), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11877449] [evidence NAS]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 11877449] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11877449] [evidence NAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 11877449] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 11877449] [evidence NAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 11877449] [evidence IEP]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence ISS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11877449] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 11877449] [evidence TAS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [evidence ISS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [pmid 11877449] [evidence IEP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [pmid 11877449] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42517] [pmid 11877449] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42517] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42523] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42523] [pmid 11877449] [evidence IEP]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 11877449] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of macrophage activation [goid 43031] [pmid 11877449] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11877449] [evidence NAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 11877449] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [pmid 11877449] [evidence TAS]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 11877449] [evidence NAS]; Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [pmid 11877449] [evidence NAS]	MGC125346; GLMR; CRL3; GLM-R; IL-31RA; CRL; PRO21384; GPL	MGC125346; GLMR; GLM-R; GPL; CRL3; IL-31RA; CRL; PRO21384
Homo sapiens	RefSeq	NM_020728.1	ILMN_19173	FAM62B	NM_020728.1	NM_020728.1		57488	45387944	NM_020728.1	FAM62B	NP_065779.1	ILMN_2057573	0000510762	S	5761	GCCAAATGCAGGCCTGTGTGTAGCTGTGTGTTTTTTCTGTGGTTGCCGCA	7	-	158216596-158216645	7q36.3e	Homo sapiens family with sequence similarity 62 (C2 domain containing) member B (FAM62B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			CHR2SYT; KIAA1228; ESYT2	CHR2SYT; KIAA1228; ESYT2
Homo sapiens	RefSeq	XM_001720014.1	ILMN_352026	LOC100131882	XM_001720014.1	XM_001720014.1		100131882	169171613	XM_001720014.1	LOC100131882	XP_001720066.1	ILMN_3248795	0001470156	S	1361	ACTTCCTTGCACCATTGTAATAAAAGCTGTTAGAATATTTGTAAATATCT					PREDICTED: Homo sapiens similar to actin-related protein 3-beta (LOC100131882), mRNA.					
Homo sapiens	RefSeq	NM_005606.5	ILMN_20935	LGMN	NM_001008530.1	NM_001008530.1		5641	56682963	NM_001008530.1	LGMN	NP_001008530.1	ILMN_1698019	0004560129	A	1753	GGCTCGCTCCAGGACCTTCTTCACAAGATGACTTGCTCGCTGTTACCTGC	14	-	93170489-93170538	14q32.12b	Homo sapiens legumain (LGMN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9065484] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AEP; LGMN1; PRSC1	AEP; LGMN1; PRSC1
Homo sapiens	RefSeq	NM_002526.1	ILMN_28610	NT5E	NM_002526.1	NM_002526.1		4907	4505466	NM_002526.1	NT5E	NP_002517.1	ILMN_1697220	0005960398	S	3066	GCCCAAAGAACAAATACTTAACGTGGGAGTGGAACCACATGAGCCTGCTC	6	+	86261733-86261782	6q14.3c	Homo sapiens 5'-nucleotidase, ecto (CD73) (NT5E), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2129526] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3036115] [evidence EXP]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [pmid 2129526] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9166] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [pmid 3036115] [evidence EXP]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [pmid 2129526] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	eN; eNT; NT5; NT; CD73; NTE; E5NT	eN; eNT; NT5; NT; CD73; NTE; E5NT
Homo sapiens	RefSeq	NM_024897.2	ILMN_18415	PAQR6	NM_024897.2	NM_024897.2		79957	24432010	NM_024897.2	PAQR6	NP_079173.2	ILMN_1737631	0006550367	A	1797	GGCCTACCCTGAATGCTTCTTGCTAACCAGGCCGAGAGGCCACACACTTG	1	-	156213477-156213526	1q22d	Homo sapiens progestin and adipoQ receptor family member VI (PAQR6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ22672	FLJ22672
Homo sapiens	RefSeq	NM_024897.2	ILMN_18415	PAQR6	NM_024897.2	NM_024897.2		79957	24432010	NM_024897.2	PAQR6	NP_079173.2	ILMN_1689852	0001300440	I	371	GCCTTGAGCTCAGAGGGGGTACCCAGGCGGGCAGGGACCGTCCAGGCCCA	1	-	156215835-156215884	1q22d	Homo sapiens progestin and adipoQ receptor family member VI (PAQR6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ22672	FLJ22672
Homo sapiens	RefSeq	XM_942411.1	ILMN_39075	LOC652769	XM_942411.1	XM_942411.1		652769	89064295	XM_942411.1	LOC652769	XP_947504.1	ILMN_1782950	0001500064	S	116	ACATCCACGAAGGTCAGTACGTAGCGGAGACAGGCACCTCACGGGCTAGG					PREDICTED: Homo sapiens similar to CG16717-PA (LOC652769), mRNA.					
Homo sapiens	RefSeq	NM_005962.4	ILMN_21967	MXI1	NM_005962.4	NM_005962.4		4601	57242781	NM_005962.4	MXI1	NP_005953.4	ILMN_1670570	0000830093	I	214	CGGGTGAAGATGATCAACGTGCAGCGTCTGCTGGAGGCTGCCGAGTTTTT	10	+	111975965-111976014	10q25.2a	Homo sapiens MAX interactor 1 (MXI1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8425219] [evidence TAS]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9624006] [evidence TAS]; The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [pmid 8425219] [evidence TAS]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8425219] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8425219] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MAD2; MXI; MGC43220; MXD2	MAD2; MXI; MGC43220; MXD2
Homo sapiens	RefSeq	NM_002937.3	ILMN_21567	RNASE4	NM_194431.1	NM_194431.1		6038	37577171	NM_194431.1	RNASE4	NP_919412.1	ILMN_1776602	0006590041	A	1000	CCAGTGTAGCTGGCCACTTATCCAGGGCTTTTTCTACTTCATCACAAGGA	14	+	20238251-20238300	14q11.2b	Homo sapiens ribonuclease, RNase A family, 4 (RNASE4), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 7742370] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [pmid 7742370] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RNS4; MGC9306	RNS4; MGC9306
Homo sapiens	RefSeq	NM_194431.1	ILMN_21567	RNASE4	NM_194431.1	NM_194431.1		6038	37577171	NM_194431.1	RNASE4	NP_919412.1	ILMN_2239408	0003930372	I	29	CCAGGAACAAACAGCTGGAACCCATCTCCCGTTGAAGGGAAACTGCCAGA	14	+	20226800-20226849	14q11.2b	Homo sapiens ribonuclease, RNase A family, 4 (RNASE4), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 7742370] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [pmid 7742370] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RNS4; MGC9306	RNS4; MGC9306
Homo sapiens	RefSeq	XR_037997.1	ILMN_338666	LOC100132843	XR_037997.1	XR_037997.1		100132843	169201379	XR_037997.1	LOC100132843		ILMN_3203615	0002350463	A	546	AGAGCAGCTAAGGCACCTGCAAGTGGAGAAGCTTTGCAAAATCTGTAGGG				10q25.1e	PREDICTED: Homo sapiens misc_RNA (LOC100132843), miscRNA.					
Homo sapiens	RefSeq	NM_021132.1	ILMN_13398	PPP3CB	NM_021132.1	NM_021132.1		5532	11036639	NM_021132.1	PPP3CB	NP_066955.1	ILMN_1802669	0007400546	S	2931	TTGGTGGCCTGCTTCCCTCATGCCCTGGAATACAACTCAGAGCTCCAGGC	10	-	74866705-74866754	10q22.2a	Homo sapiens protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (PPP3CB), mRNA.	A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin [goid 5955] [pmid 8524402] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8978785] [evidence NAS]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8392375] [evidence NAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8524402] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 8524402] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CALNA2; CALNB	CALNA2; CALNB
Homo sapiens	RefSeq	NM_005897.1	ILMN_21538	IPP	NM_005897.1	NM_005897.1		3652	5174472	NM_005897.1	IPP	NP_005888.1	ILMN_1789106	0002100519	S	2771	AGTCCCAGCACTTTGAGAGGCCGAGGTGAGACGGGAAGATGGCTTGAACT	1	-	45937209-45937258	1p34.1b	Homo sapiens intracisternal A particle-promoted polypeptide (IPP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10072760] [evidence TAS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 10072760] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KLHL27	KLHL27
Homo sapiens	RefSeq	XM_938170.1	ILMN_41929	LOC649092	XM_938170.1	XM_938170.1		649092	89057276	XM_938170.1	LOC649092	XP_943263.1	ILMN_1676706	0007210670	S	73	GGCACAACGGCGCGCACCTCGATGAGCTTTCTGGGAGATGTAGTCTCATG					PREDICTED: Homo sapiens hypothetical protein LOC649092 (LOC649092), mRNA.					
Homo sapiens	RefSeq	NM_021225.1	ILMN_12501	PROL1	NM_021225.4	NM_021225.4		58503	116805343	NM_021225.4	PROL1	NP_067048.4	ILMN_1729476	0005360441	S	796	CTCGCCAACCGTCCTCACACAGTATTGCTCAATGCCACTGTCCAAGTTAC	4	+	71275667-71275716	4q13.3a	Homo sapiens proline rich, lacrimal 1 (PROL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BPLP; PRL1	BPLP; PRL1
Homo sapiens	RefSeq	XM_926777.1	ILMN_42569	LOC642712	XM_926777.1	XM_926777.1		642712	89043877	XM_926777.1	LOC642712	XP_931870.1	ILMN_1712137	0002070221	S	195	CACCTCTGACAAATCAAGATGCACGACCCCTGGACACCTTCAAAAAGCCA	18	+	7933441-7933490		PREDICTED: Homo sapiens hypothetical protein LOC642712 (LOC642712), mRNA.					
Homo sapiens	RefSeq	NM_001011656.1	ILMN_9378	ZMAT1	NM_001011656.1	NM_001011656.1		84460	58533173	NM_001011656.1	ZMAT1	NP_001011656.1	ILMN_1661010	0001030048	I	719	GCAGAGTCAACATTCCTGAAGCCCCTTCCTGTCAAGCCTCCTACAGGCAC	X	-	101036529-101036533:101037443-101037487	Xq22.1d	Homo sapiens zinc finger, matrin type 1 (ZMAT1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1789	KIAA1789
Homo sapiens	RefSeq	NM_032047.3	ILMN_182629	B3GNT5	NM_032047.4	NM_032047.4		84002	93204850	NM_032047.4	B3GNT5	NP_114436.1	ILMN_1702609	0001300722	S	3533	CTTGGAAGTGTTTAAGGTTGCCATTGGTTGAAAACATAAGTGTCTCTGGC	3	+	182990589-182990638	3q27.1a	Homo sapiens UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 (B3GNT5), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11384981] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 11384981] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 11384981] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glycolipid, a compound containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid [goid 9247] [pmid 11384981] [evidence TAS]	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide = UDP + N-acetyl-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide [goid 8457] [pmid 11384981] [evidence IDA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + lipopolysaccharide = UDP + N-acetyl-D-glucosaminyl-lipopolysaccharide [goid 8917] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	beta3Gn-T5; B3GN-T5	beta3Gn-T5; B3GN-T5
Homo sapiens	RefSeq	NM_033015.2	ILMN_11428	FASTK	NM_033015.2	NM_033015.2		10922	39995106	NM_033015.2	FASTK	NP_148936.2	ILMN_2407464	0000770687	A	1356	CCATGGGGGGTGGATGATTTGCACTTTGGTTCCCTGTGTTTTGATTTCTC	7	-	150773731-150773780	7q36.1d	Homo sapiens Fas-activated serine/threonine kinase (FASTK), transcript variant 4, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7544399] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7544399] [evidence TAS]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 7544399] [evidence TAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein [goid 33867] [evidence IEA]	FAST	FAST
Homo sapiens	RefSeq	NM_006712.3	ILMN_11428	FASTK	NM_033015.2	NM_033015.2		10922	39995106	NM_033015.2	FASTK	NP_148936.2	ILMN_1664098	0004760328	A	1217	GCTACCCTTCGAGGAACTGGAGTCCCAGAGAGGCCTGCCCCAGCTCAAGA	7	-	150773870-150773919	7q36.1d	Homo sapiens Fas-activated serine/threonine kinase (FASTK), transcript variant 4, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7544399] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7544399] [evidence TAS]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 7544399] [evidence TAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein [goid 33867] [evidence IEA]	FAST	FAST
Homo sapiens	Unigene	Hs.540522	ILMN_105201	HS.540522	Hs.540522		Hs.540522		2464658	AA613620			ILMN_1817062	0006330411	S	145	GTAATAGCTTGCATGGTGTCTAGGGGACTGACCAGTTAGGCAGGGATGTG	16	+	59250092-59250141		no18c11.s1 NCI_CGAP_Phe1 Homo sapiens cDNA clone IMAGE:1101044 3, mRNA sequence					
Homo sapiens	RefSeq	XM_936316.1	ILMN_33789	LOC642161	XM_936316.1	XM_936316.1		642161	89026482	XM_936316.1	LOC642161	XP_941409.1	ILMN_1651403	0003520327	S	139	GAAAGCAGGACTCACAGAACCTGAAGTCACCCAGACTCCCAGCCATCAGG					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region CTL-L17 precursor (LOC642161), mRNA.					
Homo sapiens	RefSeq	NM_001528.2	ILMN_166342	HGFAC	NM_001528.2	NM_001528.2		3083	32455241	NM_001528.2	HGFAC	NP_001519.1	ILMN_1701468	0004490243	S	1806	CCTGGCCTGCGAGAAGAACGGCGTGGCTTACCTCTACGGCATCATCAGCT	4	+	3420779-3420828	4p16.2c	Homo sapiens HGF activator (HGFAC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8226803] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 7683665] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713485] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC138395; HGFA; MGC138397	MGC138395; HGFA; MGC138397
Homo sapiens	RefSeq	NM_004660.2	ILMN_17144	DDX3Y	NM_004660.2	NM_004660.2		8653	13514808	NM_004660.2	DDX3Y	NP_004651.2	ILMN_1732039	0000130369	S	4200	ACATGGTTATTTCTGTCAGTGACTTAACATTCGGTTTTACCAGCCAGCAG	Y	+	13541574-13541623	Yq11.21b	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked (DDX3Y), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DBY	DBY
Homo sapiens	RefSeq	XR_039357.1	ILMN_348855	LOC100129541	XR_039357.1	XR_039357.1		100129541	169211452	XR_039357.1	LOC100129541		ILMN_3269052	0006370347	M	137	CCAGCCAAGAAGGCAGCCACACTAGCAGAGGGTGACAAGGACAATGACAT				17q23.3a	PREDICTED: Homo sapiens misc_RNA (LOC100129541), miscRNA.					
Homo sapiens	RefSeq	NM_000549.2	ILMN_8305	TSHB	NM_000549.3	NM_000549.3		7252	115430098	NM_000549.3	TSHB	NP_000540.2	ILMN_1652578	0002710110	S	27	GTTTGGGTCACCACAGCATCTGCTCACCAATGCAAAGTAAGCATGACTGC	1	+	115373964-115374004:115377506-115377506:115377507-115377514	1p13.2a	Homo sapiens thyroid stimulating hormone, beta (TSHB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 2792087] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2792087] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 2792087] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 2792087] [evidence TAS]	TSH-BETA	TSH-BETA
Homo sapiens	RefSeq	NM_021951.2	ILMN_184096	DMRT1	NM_021951.2	NM_021951.2		1761	62241025	NM_021951.2	DMRT1	NP_068770.2	ILMN_2209221	0005570703	S	1917	AAAGTGACCTTAGTGATGCAGAGTTCCTGAGTGGTGTTTGTAGAATGAGT	9	+	894170-894195:906763-906786	9p24.3b	Homo sapiens doublesex and mab-3 related transcription factor 1 (DMRT1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [pmid 10332030] [evidence TAS]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 10332030] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10332030] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	DMT1	DMT1
Homo sapiens	RefSeq	NM_152437.1	ILMN_25794	ZNF664	NM_152437.1	NM_152437.1		144348	22748916	NM_152437.1	ZNF664	NP_689650.1	ILMN_1670640	0004010092	S	4018	TGGCATTCGCAAGCAGTGGGGAAGGGGAGAGATGCCGAGGTGGTCAGTAT	12	+	123064832-123064881	12q24.31e	Homo sapiens zinc finger protein 664 (ZNF664), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp761B128; MGC126579; ZFOC1	DKFZp761B128; MGC126579; ZFOC1
Homo sapiens	RefSeq	NM_014773.2	ILMN_181278	KIAA0141	NM_014773.2	NM_014773.2		9812	41281484	NM_014773.2	KIAA0141	NP_055588.2	ILMN_1762990	0007510086	S	2736	CAGAGAGGACCTTTGTGCTCACTTTGGCCCAGGAGGCAGTGATGCTCATG	5	+	141299598-141299647	5q31.3c	Homo sapiens KIAA0141 (KIAA0141), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10942595] [evidence IDA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_025163.2	ILMN_177022	PIGZ	NM_025163.2	NM_025163.2		80235	30581136	NM_025163.2	PIGZ	NP_079439.2	ILMN_1790352	0000580743	S	2380	GGACCCAACTTCTGGCCCCTTGGTCTGTCACCTCCTCGCTGTGTGATCTT	3	-	198157882-198157931	3q29g	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class Z (PIGZ), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15208306] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [pmid 15208306] [evidence IMP]; The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol moiety is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate moiety, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage [goid 6506] [pmid 15208306] [evidence IGI]	Catalysis of the transfer of a mannose residue from GDP-mannose to an oligosaccharide, forming an alpha-1,2-linkage [goid 26] [pmid 15208306] [evidence IMP]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC52163; SMP3; FLJ12768	SMP3; MGC52163; GPI-MT-IV; FLJ12768
Homo sapiens	RefSeq	NM_003562.3	ILMN_27046	SLC25A11	NM_003562.3	NM_003562.3		8402	34147649	NM_003562.3	SLC25A11	NP_003553.2	ILMN_1664168	0002480475	S	1360	GGAAACCAAGGCAGAGCTGAGGGGACAGGGAGGAGCAGAAGCCATCAAGA	17	-	4781429-4781478	17p13.2b	Homo sapiens solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 (SLC25A11), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 16920706] [evidence EXP]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 1457818] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1457818] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 1457818] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: oxoglutarate(out) + malate(in) = oxoglutarate(in) + malate(out) [goid 15367] [pmid 16920706] [evidence EXP]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: oxoglutarate(out) + malate(in) = oxoglutarate(in) + malate(out) [goid 15367] [pmid 1457818] [evidence TAS]	SLC20A4; OGC	SLC20A4; OGC
Homo sapiens	RefSeq	NM_018986.2	ILMN_7001	SH3TC1	NM_018986.3	NM_018986.3		54436	145386550	NM_018986.3	SH3TC1	NP_061859.3	ILMN_1756595	0002490309	S	3932	GAAGATCTACACGCGGCTGGCCACCATCTACCACAACTTCCTCCTGGACC	4	+	8242502-8242551	4p16.1d	Homo sapiens SH3 domain and tetratricopeptide repeats 1 (SH3TC1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ36243; FLJ20356; FLJ46394; FLJ32999	FLJ36243; FLJ20356
Homo sapiens	RefSeq	NM_001077494.1	ILMN_167656	NFKB2	NM_001077494.1	NM_001077494.1		4791	117320530	NM_001077494.1	NFKB2	NP_001070962.1	ILMN_2247868	0003830239	I	136	GCGCAGGCGACGACACTCGGATCCACGTCGACACCGTTGTACAAAGATAC	10	+	104144464-104144513	10q24.32b	Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) (NFKB2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15677444] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10723127] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15677444] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10723127] [evidence EXP]; A protein complex containing one Bcl protein and one or more copies of NF-kappaB2; formation of complexes of different stoichiometry depends on the Bcl3:NF-kappaB2 ratio, and allow Bcl3 to exert different regulatory effects on NF-kappaB2-dependent transcription [goid 33257] [pmid 9407099] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby a relatively unspecialized precursor cell acquires the specialized features of a follicular dendritic cell [goid 2268] [evidence IEA]; The process by which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation [goid 2467] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8360178] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions [goid 48536] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1876189] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1760839] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 1876189] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11526476] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16108830] [evidence IPI]	LYT10; LYT-10	LYT10; LYT-10
Homo sapiens	RefSeq	NM_024549.3	ILMN_308446	TCTN1	NM_001082538.1	NM_001082538.1		79600	130978358	NM_001082538.1	TCTN1	NP_001076007.1	ILMN_1685124	0005700189	S	1807	GCACCTGCAGAGGCAGGCTTCAGAGCTCCACCAGCCATCAATGCCAGGCT	12	+	109570000-109570049	12q24.11d	Homo sapiens tectonic family member 1 (TCTN1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		FLJ21127; TECT1	TECT1
Homo sapiens	Unigene	Hs.429843	ILMN_90821	HS.429843	Hs.429843		Hs.429843		22916706	BU566406			ILMN_1896149	0002030112	S	295	AGCCATTAAAACTCAGCTCCGCAATATATCCCCCCACTCCAAGGGAGGGC	1	+	8862380-8862429		AGENCOURT_10396508 NIH_MGC_141 Homo sapiens cDNA clone IMAGE:6605580 5, mRNA sequence					
Homo sapiens	RefSeq	NM_152734.2	ILMN_6232	C6ORF89	NM_152734.2	NM_152734.2		221477	47271470	NM_152734.2	C6orf89	NP_689947.2	ILMN_1665117	0003310181	S	1853	TGCCTATCTGGATGGCTTCTCAGAAGCTCGGCCCTAGTCCTCCCTGCCTT	6	+	36999912-36999961	6p21.2c	Homo sapiens chromosome 6 open reading frame 89 (C6orf89), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ25357	FLJ25357
Homo sapiens	RefSeq	XM_936087.1	ILMN_33045	ZNF452	XM_936087.2	XM_936087.2		114821	113417799	XM_936087.2	ZNF452	XP_941180.2	ILMN_1693454	0002370349	A	2473	CCCTCTCAACATGGGACTGAGGGCTGTGGTCGGCAAATAACTTGTAGCCT				6p22.1b	PREDICTED: Homo sapiens zinc finger protein 452 (ZNF452), mRNA.					
Homo sapiens	RefSeq	NM_198539.2	ILMN_30080	ZNF568	NM_198539.2	NM_198539.2		374900	117956406	NM_198539.2	ZNF568	NP_940941.2	ILMN_2229610	0002100086	S	2221	GAATCTCATCCCTCACTCTTCATGTGAGAAGTCACACAGGGGAGAAACCC	19	+	37441761-37441810	19q13.12b-q13.12c	Homo sapiens zinc finger protein 568 (ZNF568), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ35804; DKFZp686B0797	FLJ35804; DKFZp686B0797
Homo sapiens	RefSeq	NM_017810.2	ILMN_13809	ZNF434	NM_017810.2	NM_017810.2		54925	32129211	NM_017810.2	ZNF434	NP_060280.2	ILMN_1684591	0002190687	S	2711	CCTTCAGGGCAGAAGACACTGCTCTTTGTAACCCAGCCACCACCAAAAAG	16	-	3432351-3432400	16p13.3c	Homo sapiens zinc finger protein 434 (ZNF434), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20417; FLJ31901; MGC4179	FLJ20417; FLJ31901; MGC4179
Homo sapiens	RefSeq	NM_001003795.1	ILMN_12811	GTF2IRD2B	NM_001003795.2	NM_001003795.2		389524	91823780	NM_001003795.2	GTF2IRD2B	NP_001003795.1	ILMN_1760011	0006200746	S	193	GCGGCCCAGCGCCCTCAGGGATCATGGCCCAGGTAGCAGTGTCCACCCTG	7	+	74146475-74146492:74162688-74162692:74162693-74162719	7q11.23c-q11.23d	Homo sapiens GTF2I repeat domain containing 2B (GTF2IRD2B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_001003795.2	ILMN_12811	GTF2IRD2B	NM_001003795.2	NM_001003795.2		389524	91823780	NM_001003795.2	GTF2IRD2B	NP_001003795.1	ILMN_2180997	0004860328	S	3273	CGAGCAGCTGGGACTACAGGCATGCGCCACCATGCCCGGCTAATTTTTGT	7	+	74203247-74203296	7q11.23c-q11.23d	Homo sapiens GTF2I repeat domain containing 2B (GTF2IRD2B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_173537.2	ILMN_12811	GTF2IRD2B	NM_001003795.2	NM_001003795.2		389524	91823780	NM_001003795.2	GTF2IRD2B	NP_001003795.1	ILMN_1680501	0005560026	I	253	AAGAGTCCTCCTCAGAGACCAGGATGGTGGTGACATTCCTCGTGTCTGCC	7	+	74162730-74162779	7q11.23c-q11.23d	Homo sapiens GTF2I repeat domain containing 2B (GTF2IRD2B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		GTF2IRD2A; FLJ21423; FLJ37938; MGC75203
Homo sapiens	RefSeq	NM_015553.1	ILMN_15962	PIP3-E	NM_015553.1	NM_015553.1		26034	40354211	NM_015553.1	PIP3-E	NP_056368.1	ILMN_1796497	0005340471	S	6374	GTGCTTGCATGATGGGAATGTGACTTTTAGCACTGCATGGTGTTTGGGGG	6	-	154517701-154517750	6q25.2b-q25.2c	Homo sapiens phosphoinositide-binding protein PIP3-E (PIP3-E), mRNA.				IPCEF1; KIAA0403; RP3-402L9.2	IPCEF1; KIAA0403; RP3-402L9.2
Homo sapiens	RefSeq	NM_005524.2	ILMN_10521	HES1	NM_005524.2	NM_005524.2		3280	8400709	NM_005524.2	HES1	NP_005515.1	ILMN_1710284	0001010528	S	1117	CCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAG	3	+	193856060-193856109	3q29c	Homo sapiens hairy and enhancer of split 1, (Drosophila) (HES1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8020957] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into an auditory hair cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 42668] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of auditory hair cell differentiation [goid 45608] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process controlling the timing and/or rate at which relatively unspecialized cells acquire specialized features [goid 48505] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7906273] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]	HHL; FLJ20408; HRY; HES-1	HHL; FLJ20408; HRY; HES-1
Homo sapiens	RefSeq	NM_020125.1	ILMN_26221	SLAMF8	NM_020125.2	NM_020125.2		56833	149999609	NM_020125.2	SLAMF8	NP_064510.1	ILMN_1667224	0006040577	S	3187	GAGGGCGCTGCATGTGCTGGGTACATTTCTTGGCACTTGGGAATCAGTAG	1	+	158073793-158073842	1q23.2c	Homo sapiens SLAM family member 8 (SLAMF8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			SBBI42; MGC129578; FLJ20442; BLAME	SBBI42; MGC129578; FLJ20442; BLAME
Homo sapiens	RefSeq	XM_001722059.1	ILMN_346666	LOC100132910	XM_001722059.1	XM_001722059.1		100132910	169212964	XM_001722059.1	LOC100132910	XP_001722111.1	ILMN_3289144	0003890224	M	579	AATTCTTAGGCCTTTTCTCAAGCAGGGGATTCACCACTTTCTTAGCCTCC				18q12.2d	PREDICTED: Homo sapiens similar to PRO1477 (LOC100132910), mRNA.					
Homo sapiens	RefSeq	NM_198951.1	ILMN_8134	TGM2	NM_198951.1	NM_198951.1		7052	39777598	NM_198951.1	TGM2	NP_945189.1	ILMN_1679267	0002940446	I	1721	GCCCTGTGTTCCTGGAGCATTTGTTGACCGCCAACTGACAACATGCTAGG	20	-	36766459-36766482:36766483-36766508	20q11.23c	Homo sapiens transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) (TGM2), transcript variant 2, mRNA.		The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442029] [evidence IPI]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TGC; TG2	TGC; TG2
Homo sapiens	RefSeq	NM_198951.1	ILMN_8134	TGM2	NM_198951.1	NM_198951.1		7052	39777598	NM_198951.1	TGM2	NP_945189.1	ILMN_1797236	0005560575	A	1471	AAGGGCGAACCACCTGAACAAACTGGCCGAGAAGGAGGAGACAGGGATGG	20	-	36766709-36766758	20q11.23c	Homo sapiens transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) (TGM2), transcript variant 2, mRNA.		The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442029] [evidence IPI]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TGC; TG2	TGC; TG2
Homo sapiens	RefSeq	XM_001713835.1	ILMN_340217	LOC100131867	XM_001713835.1	XM_001713835.1		100131867	169162333	XM_001713835.1	LOC100131867	XP_001713887.1	ILMN_3239799	0006290209	S	2	TGTTAGTGATGATTTTAAAATTAAAGCAGATGGGAATCTCTCTGAGAAAG					PREDICTED: Homo sapiens hypothetical protein LOC100131867 (LOC100131867), partial mRNA.					
Homo sapiens	RefSeq	XM_937947.1	ILMN_137893	BNC1	XM_937947.1	XM_937947.1		646	89039227	XM_937947.1	BNC1	XP_943040.1	ILMN_1655086	0004070372	I	2617	TTGTTAAGGGCAGACCTGGGGCAAGAATCCAATAAGGTCGCTGACTCCGG				15q25.2b	PREDICTED: Homo sapiens basonuclin 1 (BNC1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8034748] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8034748] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 1332044] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9099851] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_942695.1	ILMN_138496	ANAPC11	XM_942695.1	XM_942695.1		51529	89043048	XM_942695.1	ANAPC11	XP_947788.1	ILMN_1674988	0006590537	I	2395	CAGATCCTTGCGCGCCTCCAGCTCGCCCGCGCGGCTGGTTCCTTTGGGAT				17q25.3g	PREDICTED: Homo sapiens APC11 anaphase promoting complex subunit 11 homolog (yeast), transcript variant 8 (ANAPC11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [pmid 11739784] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 11739784] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 11739784] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11739784] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_153479.1	ILMN_15324	CSAG1	NM_153479.1	NM_153479.1		158511	24234762	NM_153479.1	CSAG1	NP_705612.1	ILMN_1737640	0003830202	A	472	AGGAGACCACCGCCTTCTCCAGTGCTTCCTTGGGCAGCCAGTAATTCCCA	X	+	151659980-151660029	Xq28e	Homo sapiens chondrosarcoma associated gene 1 (CSAG1), transcript variant b, mRNA.				CSAGE	CSAGE
Homo sapiens	RefSeq	XM_930370.1	ILMN_35771	LOC644819	XM_930370.1	XM_930370.1		644819	89041246	XM_930370.1	LOC644819	XP_935463.1	ILMN_1708631	0006290136	S	623	TCAAGGTCTCCAAGCAAGTCTACCCCAGGCTGGGAGGAGGACCACAAGGA	17	-	18796473-18796522		PREDICTED: Homo sapiens hypothetical protein LOC644819 (LOC644819), mRNA.					
Homo sapiens	RefSeq	XM_925774.1	ILMN_40487	LOC642250	XM_925774.1	XM_925774.1		642250	88943947	XM_925774.1	LOC642250	XP_930867.1	ILMN_1771861	0000150743	A	3	GTAAATCCGAAGCAGCCTGAGGTAATCTGTGAAAATGGTTCGCTATTCAC	1	-	100040-100056:100057-100089		PREDICTED: Homo sapiens similar to 60S ribosomal protein L17 (L23), transcript variant 1 (LOC642250), mRNA.					
Homo sapiens	RefSeq	NM_006799.2	ILMN_23978	PRSS21	NM_144956.1	NM_144956.1		10942	21614530	NM_144956.1	PRSS21	NP_659205.1	ILMN_1774256	0004780373	A	940	GATCCAGAAGCTGATGGCCCAGAGTGGCATGTCCCAGCCAGACCCCTCCT	16	+	2811502-2811551	16p13.3d	Homo sapiens protease, serine, 21 (testisin) (PRSS21), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9826525] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10397266] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10397266] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TEST1; ESP-1; ESP1	ESP1; TEST1; ESP-1
Homo sapiens	RefSeq	XM_001715827.1	ILMN_348371	LOC650405	XM_001715827.1	XM_001715827.1		650405	169167317	XM_001715827.1	LOC650405	XP_001715879.1	ILMN_3246299	0006380471	S	373	ACCCCTCCCACAGTGTTACACACCCGAACAAAAACCCCCAGGGAAAGAGA					PREDICTED: Homo sapiens similar to hCG2042707 (LOC650405), mRNA.					
Homo sapiens	RefSeq	NM_172024.1	ILMN_17852	ABCC13	NM_172024.1	NM_172024.1		150000	25952070	NM_172024.1	ABCC13	NP_742021.1	ILMN_1774344	0004780553	I	1313	GTGTTTCAGGCACAGGAAGTACAGCAGTGAGGGGAAATGACAAGTCCAGC	21	+	14594052-14594101	21q11.2c	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 13 (ABCC13), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	PRED6; C21orf73	PRED6; C21orf73
Homo sapiens	RefSeq	NM_001397.1	ILMN_20910	ECE1	NM_001397.1	NM_001397.1		1889	4503442	NM_001397.1	ECE1	NP_001388.1	ILMN_1672174	0000270050	S	2287	CCGCCTCACAAGTGCGAAGTCTGGTAAGGACGAAGCGGAGAGAGCCAAGA	1	-	21419011-21419034:21419035-21419060	1p36.12b	Homo sapiens endothelin converting enzyme 1 (ECE1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7864876] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7695628] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 7805846] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ECE	ECE
Homo sapiens	RefSeq	NM_003924.2	ILMN_14205	PHOX2B	NM_003924.2	NM_003924.2		8929	12707579	NM_003924.2	PHOX2B	NP_003915.2	ILMN_1736619	0005130181	S	2419	GCAGGGGTGTCTCGGTTTGCATTTCTGTTGGAATGATCCGAACTGGACTC	4	-	41441417-41441466	4p13d	Homo sapiens paired-like homeobox 2b (PHOX2B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10395798] [evidence TAS]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10395798] [evidence TAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 10395798] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PMX2B; NBPhox	PMX2B; NBPhox
Homo sapiens	RefSeq	NM_001775.2	ILMN_8672	CD38	NM_001775.2	NM_001775.2		952	38454325	NM_001775.2	CD38	NP_001766.2	ILMN_2233783	0002760500	S	1064	TACATGACTCAGCATACCTGCTGGTGCAGAGCTGAAGATTTTGGAGGGTC	4	+	15459377-15459426	4p15.32d	Homo sapiens CD38 molecule (CD38), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8253715] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8253715] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8253715] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 10777496] [evidence TAS]	Catalysis of the reaction: NAD+ + H2O = nicotinamide + ADP-ribose [goid 3953] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA];  [goid 16849] [evidence IEA]	T10	T10
Homo sapiens	RefSeq	NM_018845.1	ILMN_19038	RAG1AP1	NM_018845.1	NM_018845.1		55974	10047123	NM_018845.1	RAG1AP1	NP_061333.1	ILMN_2218648	0001570619	S	950	TGGAGGTTGGGGTGCAATCTTTAGAATATGCCTTAAAAGGCCGGGCGCGG	1	+	153377603-153377652	1q22a	Homo sapiens recombination activating gene 1 activating protein 1 (RAG1AP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8630032] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any epigenetic process that activates or increases the rate of gene expression [goid 45815] [pmid 8630032] [evidence ISS]		SCP; RP11-540D14.5; slv	SCP; RP11-540D14.5; slv
Homo sapiens	RefSeq	XM_001723221.1	ILMN_348862	LOC100133401	XM_001723221.1	XM_001723221.1		100133401	169214128	XM_001723221.1	LOC100133401	XP_001723273.1	ILMN_3246653	0006650706	S	1486	AGGCTGTGGGGTTTTGTTCCAGCAGTGCAAAGGGGCCGAGATGATCGCCA					PREDICTED: Homo sapiens hypothetical protein LOC100133401 (LOC100133401), mRNA.					
Homo sapiens	RefSeq	XR_039149.1	ILMN_335081	LOC643873	XR_039149.1	XR_039149.1		643873	169216606	XR_039149.1	LOC643873		ILMN_3275672	0006420524	M	2908	CACTCCTTGCCTGTTCCTGATGCTTTGACCCCTTTTATAGATCAGAGTGC	X	-	110748441-110748490	Xq23a	PREDICTED: Homo sapiens misc_RNA (LOC643873), miscRNA.					
Homo sapiens	RefSeq	NM_003683.5	ILMN_181792	RRP1	NM_003683.5	NM_003683.5		8568	134304836	NM_003683.5	RRP1	NP_003674.1	ILMN_3235477	0000240154	S	1557	TGTAGACTCAGGACCGTGGCTCCAGAACTCCTGTGCCAGGCGGGAGGGAA	21	+	44048161-44048210	21q22.3c	Homo sapiens ribosomal RNA processing 1 homolog (S. cerevisiae) (RRP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9192856] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 16780588] [evidence IDA]; A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit [goid 30688] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		D21S2056E; RRP1A; NNP-1; NOP52	D21S2056E; RRP1A; NNP-1; NOP52
Homo sapiens	RefSeq	NM_001039500.2	ILMN_370092	VWA5B1	NM_001039500.2	NM_001039500.2		127731	210147461	NM_001039500.2	VWA5B1	NP_001034589.2	ILMN_3236561	0003800743	S	4181	GAGGGAAGATGCAGTGGAAGCCTGAGCCCTGTCTGGAGGTAGACCACGTG	1	+	20681093-20681142	1p36.12b	Homo sapiens von Willebrand factor A domain containing 5B1 (VWA5B1), mRNA.					
Homo sapiens	Unigene	Hs.539721	ILMN_104699	HS.539721	Hs.539721		Hs.539721		83081043	DB341901			ILMN_1900888	0004060215	S	471	ACAGCCTTTATCTCCAGAGTGGTAATCAGGGGGCTGCAATGGACCTGAAG	13	+	46905394-46905443		DB341901 TESTI4 Homo sapiens cDNA clone TESTI4050405 3, mRNA sequence					
Homo sapiens	RefSeq	XM_943378.1	ILMN_40621	LOC642335	XM_943378.2	XM_943378.2		642335	113417885	XM_943378.2	LOC642335	XP_948471.1	ILMN_1768072	0004250474	S	2277	ATTATAATCCTTCGATGTCTTATTATATAGAAATATAATTGATTTTTGTT				6p25.3b	PREDICTED: Homo sapiens hypothetical LOC642335 (LOC642335), mRNA.					
Homo sapiens	RefSeq	NM_014931.2	ILMN_21557	SAPS1	NM_014931.3	NM_014931.3		22870	151101458	NM_014931.3	SAPS1	NP_055746.3	ILMN_1794085	0003140162	S	3402	GAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAGT	19	-	60433144-60433193	19q13.42b	Homo sapiens SAPS domain family, member 1 (SAPS1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			SAP190; MGC138185; MGC142003; PP6R1; KIAA1115	SAP190; KIAA1115
Homo sapiens	RefSeq	XR_040497.1	ILMN_345663	FLJ44342	XR_040497.1	XR_040497.1		645460	169211007	XR_040497.1	FLJ44342		ILMN_3265237	0004180554	M	6757	GCTTGTCTCTGATATTCCCAGTAGCTTCCCTCTGTGTGAGGAAAGGATAG	17	-	53421600-53421649	17q22d	PREDICTED: Homo sapiens hypothetical LOC645460 (FLJ44342), miscRNA.					
Homo sapiens	RefSeq	NM_172195.1	ILMN_18315	EIF2B4	NM_172195.2	NM_172195.2		8890	78000152	NM_172195.2	EIF2B4	NP_751945.1	ILMN_1748157	0006380326	I	74	GTGCCCCCAAACCCTCCCGGAGTCTCTCTGGCTCACTTTGTGCCCTGTTT	2	-	27446300-27446349	2p23.3a	Homo sapiens eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa (EIF2B4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 15060152] [evidence IDA]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [pmid 15507143] [evidence IMP]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [pmid 16289705] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [pmid 12556349] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 12499492] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence ISS]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [pmid 15217090] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 14566705] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence ISS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 51716] [pmid 8626696] [evidence IDA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 16289705] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 11323413] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 15054402] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15060152] [evidence IPI]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	EIF-2B; EIF2Bdelta; EIF2B; DKFZp586J0119	EIF-2B; DKFZp586J0119; EIF2Bdelta; EIF2B
Homo sapiens	RefSeq	NM_014332.1	ILMN_29124	SMPX	NM_014332.1	NM_014332.1		23676	10047089	NM_014332.1	SMPX	NP_055147.1	ILMN_1778743	0001010093	S	325	CCCACCTCGGATGAGGAGAAGAAGCCAATTCCAGGAGCGAAGAAACTTCC	X	-	21755756-21755805	Xp22.12a	Homo sapiens small muscle protein, X-linked (SMPX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [pmid 10598820] [evidence TAS]			
Homo sapiens	RefSeq	NM_014332.1	ILMN_29124	SMPX	NM_014332.1	NM_014332.1		23676	10047089	NM_014332.1	SMPX	NP_055147.1	ILMN_2162603	0004120554	S	643	GGCACCTCACAGAACAAATTAGCCCATAAATTCAACACCTGGAGGGTGTG	X	-	21724284-21724333	Xp22.12a	Homo sapiens small muscle protein, X-linked (SMPX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [pmid 10598820] [evidence TAS]			
Homo sapiens	RefSeq	NM_003089.4	ILMN_21253	SNRNP70	NM_003089.4	NM_003089.4		6625	57634537	NM_003089.4	SNRNP70	NP_003080.2	ILMN_2380839	0003120133	A	1459	TGACGGTCCAGAGGAAAAGGGCCGGGATCGTGACCGGGAGCGACGGCGGA	19	+	49611406-49611455	19q13.33a	Homo sapiens small nuclear ribonucleoprotein 70kDa (U1) (SNRNP70), mRNA.				U1AP; RPU1; U1RNP; RNPU1Z; U170K	U1AP; RPU1; U1RNP; RNPU1Z; U170K
Homo sapiens	RefSeq	NM_003089.4	ILMN_21253	SNRNP70	NM_003089.4	NM_003089.4		6625	57634537	NM_003089.4	SNRNP70	NP_003080.2	ILMN_1732053	0003870010	A	1831	GGCCACTTGAGTTTGTCCTCCAAGGGTAGGTGTCTCATTTGTTCTGGCCC	19	+	49611778-49611827	19q13.33a	Homo sapiens small nuclear ribonucleoprotein 70kDa (U1) (SNRNP70), mRNA.				U1AP; RPU1; U1RNP; RNPU1Z; U170K	U1AP; RPU1; U1RNP; RNPU1Z; U170K
Homo sapiens	RefSeq	NM_003089.4	ILMN_21253	SNRNP70	NM_003089.4	NM_003089.4		6625	57634537	NM_003089.4	SNRNP70	NP_003080.2	ILMN_3248113	0001430670	S	1682	ATGGAGTCTGAGGGCGGCGACGGCTACCTGGCTCCGGAGAATGGGTATTT	19	+	49611629-49611678	19q13.33a	Homo sapiens small nuclear ribonucleoprotein 70kDa (U1) (SNRNP70), mRNA.				U1AP; RPU1; U1RNP; RNPU1Z; U170K	U1AP; RPU1; U1RNP; RNPU1Z; U170K
Homo sapiens	RefSeq	NM_178025.1	ILMN_23263	GGTL3	NM_178025.1	NM_178025.1		2686	30061497	NM_178025.1	GGTL3	NP_821157.1	ILMN_1786186	0002680161	I	1122	TGGAAAAATGGGTACTTAGTGCGGTGGCAAAAGCCAAACACACCCCTGAG	20	-	32912451-32912500	20q11.22b	Homo sapiens gamma-glutamyltransferase-like 3 (GGTL3), transcript variant 2, mRNA.				GGTL5; D20S101; dJ18C9.2	GGTL5; D20S101; dJ18C9.2
Homo sapiens	RefSeq	XM_001714519.1	ILMN_336244	LOC100134773	XM_001714519.1	XM_001714519.1		100134773	169170483	XM_001714519.1	LOC100134773	XP_001714571.1	ILMN_3236627	0002570113	S	52	GTCCCTCGTGGTATGGAATCGCAAGGCTGGAAAACATCATTCAAGTGGGC	7	+	63896729-63896778		PREDICTED: Homo sapiens hypothetical protein LOC100134773 (LOC100134773), mRNA.					
Homo sapiens	RefSeq	NM_003949.2	ILMN_167131	HAP1	NM_001079870.1	NM_001079870.1		9001	120431742	NM_001079870.1	HAP1	NP_001073339.1	ILMN_1776861	0006040722	A	3698	TCCCTGCCCCTGGCTTCCTCTTCCATGTTCTGCCCTTTCCCACACCTTTG	17	-	39879026-39879075	17q21.2b	Homo sapiens huntingtin-associated protein 1 (HAP1), transcript variant 3, mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9361024] [evidence TAS]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9361024] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HIP5; hHLP1; HAP2; HLP	hHLP1; HIP5; HAP2; HLP
Homo sapiens	RefSeq	XM_938781.1	ILMN_39719	LOC649712	XM_938781.1	XM_938781.1		649712	88952873	XM_938781.1	LOC649712	XP_943874.1	ILMN_1714466	0001030154	S	1479	CCCTGACACCTCTGAACTCCTGAGTAGCTGGGACCCCAAGCGCCAGAAGA					PREDICTED: Homo sapiens hypothetical protein LOC649712 (LOC649712), mRNA.					
Homo sapiens	RefSeq	NM_003827.2	ILMN_27675	NAPA	NM_003827.2	NM_003827.2		8775	47933378	NM_003827.2	NAPA	NP_003818.2	ILMN_1713285	0001580373	S	1469	ACAGACCTATTTGCTAGGGGTGCTGCCGGGGATTTGGGGTCAGCATCTGG	19	-	52683026-52683075	19q13.32c	Homo sapiens N-ethylmaleimide-sensitive factor attachment protein, alpha (NAPA), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 8455721] [evidence TAS]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 8455721] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IEA]	SNAPA	SNAPA
Homo sapiens	RefSeq	NR_003050.1	ILMN_172758	SNORD62B	NR_003050.1	NR_003050.1		692093	98162761	NR_003050.1	SNORD62B		ILMN_3248270	0004640279	S	3	TCAGTGATGTAATTCCAATAGATCCTTCTGACCCTCCACTGTGGACTCAA	9	+	134365875-134365924		Homo sapiens small nucleolar RNA, C/D box 62B (SNORD62B), small nucleolar RNA.				U62; U62B	U62; U62B
Homo sapiens	RefSeq	NM_017490.1	ILMN_34656	MARK2	NM_017490.2	NM_017490.2		2011	86990440	NM_017490.2	MARK2	NP_059672.2	ILMN_1789692	0003140491	I	1888	GCCAGCACCAGAAATCCATGTCGGCCTCCGTGCACCCCAACAAGGCCTCT	11	+	63428102-63428151	11q13.1a	Homo sapiens MAP/microtubule affinity-regulating kinase 2 (MARK2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region that lies just beneath the plasma membrane on the basal edge of a cell [goid 45180] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 14976552] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8274451] [evidence NAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 14976552] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [pmid 15324659] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 14976552] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 14976552] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8274451] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15324659] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14676191] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 14976552] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC99619; Par1b; EMK1; PAR-1	MGC99619; EMK1; PAR-1
Homo sapiens	RefSeq	NM_001826.1	ILMN_11313	CKS1B	NM_001826.1	NM_001826.1		1163	4502856	NM_001826.1	CKS1B	NP_001817.1	ILMN_1719256	0004210088	S	190	GAACCAGAACCTCACATCTTGCTGTTCCGGCGCCCACTACCCAAGAAACC	1	+	153217209-153217214:153217825-153217868	1q21.3e	Homo sapiens CDC28 protein kinase regulatory subunit 1B (CKS1B), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11231585] [evidence EXP]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 8601310] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2227411] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9276444] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12813041] [evidence IPI]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]	PNAS-18; PNAS-16; ckshs1; CKS1	PNAS-18; PNAS-16; ckshs1; CKS1
Homo sapiens	RefSeq	NM_001826.1	ILMN_11313	CKS1B	NM_001826.1	NM_001826.1		1163	4502856	NM_001826.1	CKS1B	NP_001817.1	ILMN_2041046	0002450358	S	464	CCTAAGCTGAGTGTGACCCCAGAAGCCACGATGTGCTCTGTATCCAGAAC	1	+	153218093-153218142	1q21.3e	Homo sapiens CDC28 protein kinase regulatory subunit 1B (CKS1B), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11231585] [evidence EXP]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 8601310] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2227411] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9276444] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12813041] [evidence IPI]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]	PNAS-18; PNAS-16; ckshs1; CKS1	PNAS-18; PNAS-16; ckshs1; CKS1
Homo sapiens	RefSeq	XM_944615.1	ILMN_37942	LOC651357	XM_944615.1	XM_944615.1		651357	89059351	XM_944615.1	LOC651357	XP_949708.1	ILMN_1651913	0001430561	S	1	ATGGACCACAACTTTGCTCCTGCTCCTCCAGAGATGCAGTCGCATGGAGC					PREDICTED: Homo sapiens hypothetical protein LOC651357 (LOC651357), mRNA.					
Homo sapiens	RefSeq	NM_182734.1	ILMN_3945	PLCB1	NM_182734.1	NM_182734.1		23236	33356543	NM_182734.1	PLCB1	NP_877398.1	ILMN_1708432	0001940735	I	3473	CCTCTGTTTCCCCCAACTTTACTCCCCCCAACCCTCAAGCTCTCAAGTGG	20	+	8670155-8670204	20p12.3a	Homo sapiens phospholipase C, beta 1 (phosphoinositide-specific) (PLCB1), transcript variant 2, mRNA.				FLJ45792; PLC-154; PLC-I; PI-PLC	FLJ45792; PLC-154; PLC-I; PI-PLC
Homo sapiens	RefSeq	NM_172138.1	ILMN_4214	IL28A	NM_172138.1	NM_172138.1		282616	26024320	NM_172138.1	IL28A	NP_742150.1	ILMN_1662302	0002630131	S	414	ACGTCTTGGACCAGCCCCTTCACACCCTGCACCATATCCTCTCCCAGTTC	19	+	39760219-39760268	19q13.2a	Homo sapiens interleukin 28A (interferon, lambda 2) (IL28A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	IFNL2; IL-28A	IFNL2; IL-28A
Homo sapiens	RefSeq	NM_005704.3	ILMN_178651	PTPRU	NM_005704.3	NM_005704.3		10076	110735401	NM_005704.3	PTPRU	NP_005695.3	ILMN_2383300	0004070138	A	5503	CTACTGACCTACCTCGCAGGGGGCTGTGGGGAGGCATAAGCTGATGTTTG	1	+	29525812-29525861	1p35.3a	Homo sapiens protein tyrosine phosphatase, receptor type, U (PTPRU), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8700514] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 8700514] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8700514] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [pmid 8700514] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5001] [pmid 8700514] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	GLEPP1; hPTP-J; PTPPSI; PCP-2; FMI; PTP-PI; R-PTP-PSI; PTPRO; PTP; FLJ37530; PTPU2; PTP-J	GLEPP1; hPTP-J; PTPPSI; PCP-2; FMI; PTP-PI; R-PTP-PSI; PTPRO; PTP; FLJ37530; PTPU2; PTP-J
Homo sapiens	RefSeq	XM_001719352.1	ILMN_334941	LOC100133118	XM_001719352.1	XM_001719352.1		100133118	169161374	XM_001719352.1	LOC100133118	XP_001719404.1	ILMN_3199052	0007610376	A	3	GAAAATTGCAGAGGCCCAAGGTAAAGGGGGCAGTTACTGGGCTTCTGGGC	1	-	76938858-76938880:76956398-76956406:76963964-76963981	1p31.1f	PREDICTED: Homo sapiens hypothetical protein LOC100133118 (LOC100133118), mRNA.					
Homo sapiens	RefSeq	XM_001719352.1	ILMN_334941	LOC100133118	XM_001719352.1	XM_001719352.1		100133118	169161374	XM_001719352.1	LOC100133118	XP_001719404.1	ILMN_3275522	0002360500	M	768	TGCGGACGAGCTCCCGCAGACTCTGCTTTCGCCCGTTCATCTTCCAGTTC	1	-	76938093-76938142	1p31.1f	PREDICTED: Homo sapiens hypothetical protein LOC100133118 (LOC100133118), mRNA.					
Homo sapiens	RefSeq	NM_002182.2	ILMN_21742	IL1RAP	NM_002182.2	NM_002182.2		3556	24430220	NM_002182.2	IL1RAP	NP_002173.1	ILMN_1686884	0004880632	I	4419	AGGGACGTTCCATGCCCAGGTTAACAAAGAACTGTGATATATAGAGTGTC	3	+	191851688-191851737	3q28c	Homo sapiens interleukin 1 receptor accessory protein (IL1RAP), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7775431] [evidence TAS]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 7775431] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9065432] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12721283] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]	FLJ37788; C3orf13; IL1R3; IL-1RAcP	FLJ37788; C3orf13; IL1R3; IL-1RAcP
Homo sapiens	RefSeq	NM_173583.1	ILMN_31184	KLHL35	NM_001039548.1	NM_001039548.1		283212	88196793	NM_001039548.1	KLHL35	NP_001034637.1	ILMN_1693471	0000510632	S	1361	AGATGCACACTCTGCTCCCTCATGGCACCTCCACGCAAACAGCCCTTAAC	11	-	74811172-74811221	11q13.4c	Homo sapiens kelch-like 35 (Drosophila) (KLHL35), mRNA.					
Homo sapiens	RefSeq	NM_198585.1	ILMN_11069	ENTPD8	NM_198585.2	NM_198585.2		377841	110431365	NM_198585.2	ENTPD8	NP_940987.2	ILMN_1706056	0005490717	S	1851	AGGGCCACATGCTGCCTGCAAACAGGGCAAGACCACGGAGGCACAGGGGT	9	-	140329026-140329075	9q34.3f	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 8 (ENTPD8), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	GLSR2492; UNQ2492; NTPDase-8	GLSR2492; UNQ2492; NTPDase-8
Homo sapiens	RefSeq	NM_198827.2	ILMN_6496	GPR133	NM_198827.2	NM_198827.2		283383	45433551	NM_198827.2	GPR133	NP_942122.2	ILMN_1682487	0005290603	S	2664	GCCCGCACCTCCAACGCGAAGCCCTTCCACTCGGACCTCATGAATGGGAC	12	+	130188688-130188727:130189666-130189675	12q24.33b	Homo sapiens G protein-coupled receptor 133 (GPR133), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]	FLJ16770; MGC138514; DKFZp434B1272; PGR25; MGC138512	FLJ16770; MGC138514; DKFZp434B1272; PGR25; MGC138512
Homo sapiens	RefSeq	XM_945982.1	ILMN_137822	LOC654123	XM_945982.1	XM_945982.1		654123	89059289	XM_945982.1	LOC654123	XP_951075.1	ILMN_1666939	0004880441	I	322	TGCCCTGGCTGCTTGGGATAGCGCCCAAGGGCCCAGGGCTGGACGTGCAG					PREDICTED: Homo sapiens similar to Alu subfamily SB sequence contamination warning entry, transcript variant 4 (LOC654123), mRNA.					
Homo sapiens	RefSeq	XM_931705.1	ILMN_167628	LOC728403	XM_001127004.1	XM_001127004.1		728403	113430695	XM_001127004.1	LOC728403	XP_001127004.1	ILMN_1808923	0002340088	A	760	TCTGGATTATGAAGTGGAGGCCTATCGCCGCAGACACCACAACAGCAGCC	Y	+	9257001-9257050	Yp11.2d	PREDICTED: Homo sapiens similar to testis specific protein, Y-linked 1 (LOC728403), mRNA.					
Homo sapiens	RefSeq	XR_015202.1	ILMN_183170	LOC729494	XR_015202.1	XR_015202.1		729494	113423069	XR_015202.1	LOC729494		ILMN_3225053	0004480349	A	908	AGGAGTCTCTACCTATGAAATTACCTTGAGAACATTGCCTTTTACGTTCC				11q21b	PREDICTED: Homo sapiens misc_RNA (LOC729494), miscRNA.					
Homo sapiens	RefSeq	NM_005056.1	ILMN_12150	JARID1A	NM_005056.1	NM_005056.1		5927	4826967	NM_005056.1	JARID1A	NP_005047.1	ILMN_1786920	0000730068	S	6277	GCTTTTTCCCTTGCAGCCCTGACCCCAATGTCTGCTGTTTCCAACACTGG	12	-	263881-263930	12p13.33d	Homo sapiens Jumonji, AT rich interactive domain 1A (RBBP2-like) (JARID1A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8414517] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A protein complex that phosphorylates cyclin-dependent kinases such as Cdc2 on Thr161 (or an equivalent residue); contains a catalytic subunit and a regulatory subunit, and some examples also include an assembly factor [goid 19907] [pmid 11445587] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8414517] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8414517] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1857421] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RBP2; RBBP2	RBP2; RBBP2
Homo sapiens	RefSeq	NM_176821.2	ILMN_9975	NLRP10	NM_176821.3	NM_176821.3		338322	78191799	NM_176821.3	NLRP10	NP_789791.1	ILMN_1656992	0003890706	S	1910	AGCAGGAACACAAAAGGAAGCTTCTACTGGAAAAGGCAGAGGGACAGAGG	11	-	7981216-7981265	11p15.4b	Homo sapiens NLR family, pyrin domain containing 10 (NLRP10), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	NOD8; PAN5; NALP10; PYNOD; CLR11.1	NOD8; PYNOD
Homo sapiens	RefSeq	NM_007112.3	ILMN_10000	THBS3	NM_007112.3	NM_007112.3		7059	40317629	NM_007112.3	THBS3	NP_009043.1	ILMN_1804663	0001260039	S	3074	CAAGGGGTATTACTCAGGCACTAACCCCAGGAAAGATGACAGCACATTGC	1	-	155165402-155165451	1q22a	Homo sapiens thrombospondin 3 (THBS3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 6338048] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 6338048] [evidence EXP]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 8468055] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8288588] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC119564; TSP3; MGC119565	MGC119564; TSP3; MGC119565
Homo sapiens	RefSeq	NM_013366.3	ILMN_162061	ANAPC2	NM_013366.3	NM_013366.3		29882	41327747	NM_013366.3	ANAPC2	NP_037498.1	ILMN_1813243	0004180634	A	2177	CAGGGTGTGCTGCGTGAGGAGCCCCCCGGCACCTTCTCTGTCATTGAGGA	9	-	140069791-140069840	9q34.3e	Homo sapiens anaphase promoting complex subunit 2 (ANAPC2), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9469815] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9469815] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyclins, proteins whose levels in a cell varies markedly during the cell cycle, and which play key roles in regulating cell cycle phase transitions [goid 8054] [pmid 9469815] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9469815] [evidence TAS]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	RP11-350O14.5; APC2	RP11-350O14.5; APC2
Homo sapiens	RefSeq	XM_293407.4	ILMN_35737	MAGEB5	XM_942614.2	XM_942614.2		347541	113430336	XM_942614.2	MAGEB5	XP_947707.2	ILMN_1675015	0004050170	A	1047	CTGCAGTGGCCAAGACTGTCTCAGGGCGAAGTTCAGCAGCTTCTCTCAAC				Xp21.3c	PREDICTED: Homo sapiens melanoma antigen family B, 5 (MAGEB5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_001033662.1	ILMN_27394	C8ORF15	NM_001033662.2	NM_001033662.2		439940	149773550	NM_001033662.2	C8orf15	NP_001028834.1	ILMN_1654792	0003370739	S	895	CCAGGTGGGGACCACGGGACACTGGAACTGCCTTGGTGTGTTTATTTCCA				8p23.1b	Homo sapiens chromosome 8 open reading frame 15 (C8orf15), mRNA.					
Homo sapiens	RefSeq	NM_139018.2	ILMN_4334	CD300LF	NM_139018.2	NM_139018.2		146722	38455397	NM_139018.2	CD300LF	NP_620587.2	ILMN_2112357	0004540228	S	1679	CTTGAGCCCATTGAAACTGATCTTGAGCTCCTGGCCTCCAGAATTGCAGG	17	-	70202077-70202126	17q25.1b	Homo sapiens CD300 molecule-like family member f (CD300LF), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IREM1; IgSF13; NKIR; CLM1; CD300f	IREM1; IgSF13; NKIR; CLM1; CD300f
Homo sapiens	Unigene	Hs.538083	ILMN_103688	HS.538083	Hs.538083		Hs.538083		3743175	AI191966			ILMN_1914284	0006110039	S	155	GGTTCCAAGTTTCAGGTGCTATAGATGAGGGGCAATGTGGGTCTTCTGGC	1	-	56118398-56118447		qe07b12.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1738271 3, mRNA sequence					
Homo sapiens	Unigene	Hs.437179	ILMN_91861	HS.437179	Hs.437179		Hs.437179		46957245	BX405679			ILMN_1816070	0002260601	S	409	GCCCACGGTGTTCAAAATGCACAGCAGTGCCAGATGGCTGGACTCAGATA	8	+	38240233-38240282		BX405679 Homo sapiens FETAL LIVER Homo sapiens cDNA clone CS0DM006YJ16 3-PRIME, mRNA sequence					
Homo sapiens	Unigene	Hs.274526	ILMN_84226	HS.274526	Hs.274526		Hs.274526		5912132	AL117577			ILMN_1842533	0004640167	S	369	CTCAAGTTCTCTCCAGGAATTAGCTTCACCTCTTTGTGCTTTGGCTCCAC	2	+	19551804-19551853		Homo sapiens mRNA; cDNA DKFZp434C108 (from clone DKFZp434C108)					
Homo sapiens	Unigene	Hs.162891	ILMN_79877	HS.162891	Hs.162891		Hs.162891		27825583	BX093041			ILMN_1825529	0004730022	S	176	CATCCTATTCTTGCGCATTAGCACCTGTTACCATTATAAGGCCCACAAGC	X	+	123982926-123982975		BX093041 NCI_CGAP_Pr3 Homo sapiens cDNA clone IMAGp998E023027 ; IMAGE:1204585, mRNA sequence					
Homo sapiens	RefSeq	NM_018261.3	ILMN_23321	EXOC1	NM_018261.3	NM_018261.3		55763	67944631	NM_018261.3	EXOC1	NP_060731.2	ILMN_2347805	0004150646	A	2505	GAAGGTGTTGAAGCTCGCGTGGCACAGGGCATAAGGGAGGAGGAAGTAAG	4	+	56463276-56463325	4q12d	Homo sapiens exocyst complex component 1 (EXOC1), transcript variant 1, mRNA.	A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [pmid 11406615] [evidence NAS]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 11406615] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		SEC3L1; Sec3p; SEC3; FLJ10893; BM-102	SEC3L1; Sec3p; SEC3; FLJ10893; BM-102
Homo sapiens	RefSeq	NM_018261.3	ILMN_23321	EXOC1	NM_018261.3	NM_018261.3		55763	67944631	NM_018261.3	EXOC1	NP_060731.2	ILMN_2347807	0007570603	A	2801	GGACATTCTGGATTATTGTTCCAGCATTGCACAGTCCCACTAAACCTTGT	4	+	56465376-56465418:56465419-56465425	4q12d	Homo sapiens exocyst complex component 1 (EXOC1), transcript variant 1, mRNA.	A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [pmid 11406615] [evidence NAS]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 11406615] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		SEC3L1; Sec3p; SEC3; FLJ10893; BM-102	SEC3L1; Sec3p; SEC3; FLJ10893; BM-102
Homo sapiens	Unigene	Hs.571060	ILMN_123241	HS.571060	Hs.571060		Hs.571060		31443691	CD511973			ILMN_1853711	0001300301	S	537	GAAGCGGGTACGAAGGTGGATCAAGAGCCCAATGGTCAGTGTGGACAAGC	6	-	134624932-134624978:134680223-134680225		AGENCOURT_14360408 NIH_MGC_186 Homo sapiens cDNA clone IMAGE:30406083 5, mRNA sequence					
Homo sapiens	Unigene	Hs.28456	ILMN_72143	HS.28456	Hs.28456		Hs.28456		27834863	BX107795			ILMN_1889229	0001690273	S	561	CTGCAGCCCCTGAAGTTCTTTGAACCTGTTCTGGGTTCTGAGGGCTGTCC	1	+	178439613-178439618:178439620-178439663		BX107795 Soares breast 3NbHBst Homo sapiens cDNA clone IMAGp998G11259, mRNA sequence					
Homo sapiens	RefSeq	NM_002592.2	ILMN_9537	PCNA	NM_002592.2	NM_002592.2		5111	33239449	NM_002592.2	PCNA	NP_002583.1	ILMN_1685682	0001410524	I	20	CCTGGTTCTGGAGGTAACCGGTTACTGAGGGCGAGAAGCGCCACCCGGAG	20	-	5107199-5107248	20p12.3c	Homo sapiens proliferating cell nuclear antigen (PCNA), transcript variant 1, mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane [goid 5652] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [pmid 2565339] [evidence TAS]; A protein complex composed of three identical PCNA monomers, each comprising two similar domains, which are joined in a head-to-tail arrangement to form a homotrimer. Forms a ring-like structure in solution, with a central hole sufficiently large to accommodate the double helix of DNA. Originally characterized as a DNA sliding clamp for replicative DNA polymerases and as an essential component of the replisome, and has also been shown to be involved in other processes including Okazaki fragment processing, DNA repair, translesion DNA synthesis, DNA methylation, chromatin remodeling and cell cycle regulation [goid 43626] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA replication [goid 6275] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 15504738] [evidence NAS]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence IEA]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2565339] [evidence TAS]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15358233] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9305916] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15225546] [evidence IPI]; An accessory subunit of DNA polymerase that acts to increase the processivity of polymerization [goid 30337] [evidence IEA]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [pmid 11005803] [evidence IDA]	MGC8367	MGC8367
Homo sapiens	RefSeq	NM_007360.1	ILMN_29874	KLRK1	NM_007360.1	NM_007360.1		22914	6679051	NM_007360.1	KLRK1	NP_031386.1	ILMN_2222443	0004490204	S	1238	GCCCAGAGTGGATGGGCTGGGGGAGGGGTGCTGTTTTAATTTCTAAAGGT	12	-	10416681-10416730	12p13.2c	Homo sapiens killer cell lectin-like receptor subfamily K, member 1 (KLRK1), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2007850] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of binding to a C-type lectin receptor capable of cellular activation [goid 2223] [evidence IEA]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of natural killer cell mediated cytotoxicity [goid 45954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2007850] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an MHC class Ib protein complex to initiate a change in cellular activity. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families [goid 32394] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 2007850] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15240696] [evidence IC ]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	KLR; NKG2-D; NKG2D; CD314; D12S2489E	KLR; NKG2-D; NKG2D; CD314; D12S2489E
Homo sapiens	RefSeq	NM_004897.2	ILMN_29353	MINPP1	NM_004897.2	NM_004897.2		9562	19923760	NM_004897.2	MINPP1	NP_004888.2	ILMN_1664994	0006370639	S	1947	GTGGTAAGCTGGGAGTATCACTCTGGAAGAAAGTAACATCTCCAGATGAG	10	+	89302678-89302727	10q23.2b	Homo sapiens multiple inositol polyphosphate histidine phosphatase, 1 (MINPP1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10087200] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The chemical reactions and pathways involving a polyphosphate, the anion or salt of polyphosphoric acid [goid 6797] [pmid 10087200] [evidence TAS]; The deposition of calcium phosphate in bone tissue [goid 30282] [pmid 9923613] [evidence NAS]	Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]; Catalysis of the reaction: myo-inositol hexakisphosphate + H2O = myo-inositol pentakisphosphate (mixed isomers) + phosphate [goid 4446] [evidence IEA]; Catalysis of the reaction: phosphohistidine + H2O = histidine + phosphate [goid 8969] [pmid 10087200] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = 2-phosphoglycerate + phosphate [goid 34417] [pmid 18413611] [evidence IDA]	MIPP; HIPER1; MINPP2; DKFZp564L2016	MIPP; HIPER1; MINPP2; DKFZp564L2016
Homo sapiens	RefSeq	XM_495839.2	ILMN_33124	LOC439992	XM_495839.2	XM_495839.2		439992	89031524	XM_495839.2	LOC439992	XP_495839.1	ILMN_1671045	0002760438	A	80	GTGGTTGATCCATTTTCTAAGAAAGATTGGTACGATGTGAACGCACCTGC	10	+	86310239-86310288	10q23.1c	PREDICTED: Homo sapiens similar to ribosomal protein S3a, transcript variant 1 (LOC439992), mRNA.					
Homo sapiens	RefSeq	NM_022374.1	ILMN_18684	ATL2	NM_022374.1	NM_022374.1		64225	11641302	NM_022374.1	ATL2	NP_071769.1	ILMN_1716384	0002850494	S	2192	GCAGGCCTGACTGACCAGGTGTCTCATCATGCCAGATTAAAGACAGACTG	2	-	38376640-38376689	2p22.2a-p22.1c	Homo sapiens atlastin GTPase 2 (ATL2), mRNA.				FLJ23293; ARL3IP2; ATL2; atlastin2	FLJ23293; ARL3IP2; ATL2; atlastin2
Homo sapiens	RefSeq	NR_003010.1	ILMN_181114	SCARNA12	NR_003010.1	NR_003010.1		677777	91982758	NR_003010.1	SCARNA12		ILMN_3248223	0004670273	S	34	TGCTCTCTGGCCCTTGGCTCCTTGTTGGGGGTGGGGACTACAGATGAGAT	12	-	7076686-7076735	12p13.31d	Homo sapiens small Cajal body-specific RNA 12 (SCARNA12), guide RNA.				U89	U89
Homo sapiens	RefSeq	NM_014387.3	ILMN_30138	LAT	NM_014387.3	NM_014387.3		27040	62739153	NM_014387.3	LAT	NP_055202.1	ILMN_1750188	0005080608	I	729	GAGTCTGGGGTCCGTCCTGGACTAGGCTGACCCCTGTGTCGTTACCCCCA	16	+	28905428-28905477	16p11.2e	Homo sapiens linker for activation of T cells (LAT), transcript variant 1, mRNA.	An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IEA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [pmid 12646565] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11607830] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12646565] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 14722116] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 15100278] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 15100278] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 12646565] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 12646565] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 12646565] [evidence IMP]; The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell activation [goid 50863] [pmid 12646565] [evidence IMP]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9489702] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16938345] [evidence IPI]	pp36; LAT1	pp36; LAT1
Homo sapiens	RefSeq	NM_024807.1	ILMN_25633	TREML2	NM_024807.1	NM_024807.1		79865	13376188	NM_024807.1	TREML2	NP_079083.1	ILMN_1740864	0007380180	S	2813	AACCCACCTGGGGGAAAATAGCTCCCCAAGAGCTGGCACCAGTACCACTG	6	-	41266424-41266473	6p21.1g	Homo sapiens triggering receptor expressed on myeloid cells-like 2 (TREML2), mRNA.			Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	TLT2; dJ238O23.1; C6orf76; FLJ13693; MGC149715; MGC149716	TLT2; dJ238O23.1; C6orf76; FLJ13693; MGC149715; MGC149716
Homo sapiens	RefSeq	NM_032138.3	ILMN_181309	KBTBD7	NM_032138.3	NM_032138.3		84078	34222148	NM_032138.3	KBTBD7	NP_115514.2	ILMN_2044293	0007210280	S	2757	ACTGAACTAGGAATTGTTAGCGGGGTTTTGAAGGATGTGTACTTTCCTTC	13	-	40663896-40663945	13q14.11b	Homo sapiens kelch repeat and BTB (POZ) domain containing 7 (KBTBD7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZP434E2318	DKFZP434E2318
Homo sapiens	Unigene	Hs.545554	ILMN_108741	HS.545554	Hs.545554		Hs.545554		6076187	AW105448			ILMN_1842140	0005720427	S	272	ACAGTTTTCCTTGAGTTGGTTACTGCTGGTAGGAGTTTCTAGGAAACCCC					xd52h03.x1 NCI_CGAP_Ov23 Homo sapiens cDNA clone IMAGE:2597429 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001721476.1	ILMN_344556	LOC730351	XM_001721476.1	XM_001721476.1		730351	169172123	XM_001721476.1	LOC730351	XP_001721528.2	ILMN_3302522	0005720386	M	1	TTTAAGGAACAAAATAATGTTTTTATTAAAAATTGTACCCATAGCACCTC				7p22.2a	PREDICTED: Homo sapiens hypothetical LOC730351 (LOC730351), mRNA.					
Homo sapiens	RefSeq	XM_001717015.1	ILMN_350133	LOC100129656	XM_001717015.1	XM_001717015.1		100129656	169162853	XM_001717015.1	LOC100129656	XP_001717067.1	ILMN_3270430	0001240373	M	246	CCCTACAGCGGCAGCTGCAGCTCCCCCCGGCTCTCGAGCCACATAATGGA	1	+	243093255-243093299:243093300-243093304	1q44b	PREDICTED: Homo sapiens hypothetical protein LOC100129656 (LOC100129656), mRNA.					
Homo sapiens	Unigene	Hs.542939	ILMN_106630	HS.542939	Hs.542939		Hs.542939		5368831	AI803437			ILMN_1850443	0005560743	S	326	TACCCCTTTTTAAACCTTTATGCTTCTTTACCTTGGAATTCTTACCAGCG	3	-	144325721-144325770		tc39f05.x1 Soares_total_fetus_Nb2HF8_9w Homo sapiens cDNA clone IMAGE:2067009 3, mRNA sequence					
Homo sapiens	RefSeq	NM_207408.1	ILMN_19823	C5ORF48	NM_207408.1	NM_207408.1		389320	46409439	NM_207408.1	C5orf48	NP_997291.1	ILMN_1806520	0006520746	S	190	CAGGAATGTGAATCTGAAGCAAGCAGAAGTGTGTGGGATCCATACTGGCC	5	+	125968328-125968346:125971724-125971754	5q23.2e	Homo sapiens chromosome 5 open reading frame 48 (C5orf48), mRNA.				MGC163367; MGC163369	MGC163367; MGC163369
Homo sapiens	RefSeq	NM_018199.1	ILMN_4351	EXD2	NM_018199.2	NM_018199.2		55218	142382870	NM_018199.2	EXD2	NP_060669.1	ILMN_1771689	0007160458	S	2521	CAGGTTGCAATATGAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTG	14	+	68778515-68778564	14q24.1d	Homo sapiens exonuclease 3'-5' domain containing 2 (EXD2), mRNA.				DKFZp781L15100; DKFZp781A0133; C14orf114; FLJ10738	DKFZp781L15100; DKFZp781A0133; C14orf114; FLJ10738
Homo sapiens	RefSeq	NM_181698.1	ILMN_18920	CCNY	NM_181698.1	NM_181698.1		219771	32171183	NM_181698.1	CCNY	NP_859049.1	ILMN_1758606	0004480482	I	111	ACAGCCAGGAAATCGTGCAGTGAACCTGTCCCCTCCGGTCACAACATCAA	10	+	35577047-35577096	10p11.21c	Homo sapiens cyclin Y (CCNY), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]			CBCP1; CFP1; C10orf9	CBCP1; CFP1; C10orf9
Homo sapiens	RefSeq	XM_944681.1	ILMN_31171	C20ORF194	XM_944681.1	XM_944681.1		25943	89057947	XM_944681.1	C20orf194	XP_949774.1	ILMN_1665723	0004920386	I	1610	ACTATAAACTAAGGCAAAAGGCCAACAATAAACTGGTAAAAATATTAGAA				20p13c-p13b	PREDICTED: Homo sapiens chromosome 20 open reading frame 194, transcript variant 4 (C20orf194), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_006894.4	ILMN_18262	FMO3	NM_006894.4	NM_006894.4		2328	50541964	NM_006894.4	FMO3	NP_008825.4	ILMN_1808657	0005220379	A	1554	CGTTGAAACCCATGCAGACACGAGTGGTCGGGAGACTTCAGAAGCCTTGC	1	+	169353085-169353134	1q24.3a	Homo sapiens flavin containing monooxygenase 3 (FMO3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 9207220] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [pmid 8104117] [evidence EXP]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [pmid 8117928] [evidence EXP]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]	FMOII; dJ127D3.1; MGC34400	FMOII; dJ127D3.1; MGC34400
Homo sapiens	RefSeq	NR_030257.1	ILMN_387958	MIR544	NR_030257.1	NR_030257.1		664613	262205642	NR_030257.1	MIR544		ILMN_3309669	0002470390	S	37	CTGATTCAGGGACCAAGATTCTGCATTTTTAGCAAGTTCTCAAGTGATGC				14q32.31a	Homo sapiens microRNA 544 (MIR544), microRNA.					
Homo sapiens	RefSeq	XM_945046.1	ILMN_34895	LOC649679	XM_945046.1	XM_945046.1		649679	88981265	XM_945046.1	LOC649679	XP_950139.1	ILMN_1702663	0005810608	I	296	CCTAAAGAAGACTCTAGCTAAATCAGAGGCCTGACTATCTCTAACACCCA					PREDICTED: Homo sapiens similar to Tubulin beta-4q chain, transcript variant 3 (LOC649679), mRNA.					
Homo sapiens	RefSeq	NM_033302.1	ILMN_18033	ADRA1A	NM_033302.1	NM_033302.1		148	15451756	NM_033302.1	ADRA1A	NP_150645.1	ILMN_1653821	0001070315	I	1815	GGAATCCACCCCAGGAGCCCAGGAGCCTTGCCTGACACTTGGATTTACTT	8	-	26670054-26670103	8p21.2a	Homo sapiens adrenergic, alpha-1A-, receptor (ADRA1A), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8396931] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction as a result of the baroreceptor response to increased blood pressure [goid 1985] [evidence IEA]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IEA]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IEA]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10671514] [evidence TAS]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 8183249] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8396931] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10860850] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10671514] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8396931] [evidence TAS]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10860850] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA];  [goid 4937] [pmid 9490024] [evidence NAS];  [goid 4937] [pmid 7737411] [evidence TAS]	ADRA1C; ALPHA1AAR; ADRA1L1	ADRA1C; ALPHA1AAR; ADRA1L1
Homo sapiens	RefSeq	NM_004792.2	ILMN_24595	PPIG	NM_004792.2	NM_004792.2		9360	42560243	NM_004792.2	PPIG	NP_004783.2	ILMN_2212156	0000150164	S	2441	GATCATGAATCAAGCCCTGGAACAGATGAAGACAAAAGCGGATGAGTGAG	2	+	170202235-170202279:170202280-170202284	2q31.1a	Homo sapiens peptidylprolyl isomerase G (cyclophilin G) (PPIG), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9153302] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9153302] [evidence TAS]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9153302] [evidence TAS]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids [goid 16018] [pmid 9153302] [evidence TAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CYP; SRCyp; MGC133241; CARS-Cyp	CYP; SRCyp; MGC133241; CARS-Cyp
Homo sapiens	RefSeq	NM_004792.2	ILMN_24595	PPIG	NM_004792.2	NM_004792.2		9360	42560243	NM_004792.2	PPIG	NP_004783.2	ILMN_1807611	0005340341	S	2016	GGAGAAGAGGACGGTCACGAAGCCGAGAGAGAAGAACACCACCAGGAAGA	2	+	170201810-170201859	2q31.1a	Homo sapiens peptidylprolyl isomerase G (cyclophilin G) (PPIG), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9153302] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9153302] [evidence TAS]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9153302] [evidence TAS]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids [goid 16018] [pmid 9153302] [evidence TAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CYP; SRCyp; MGC133241; CARS-Cyp	CYP; SRCyp; MGC133241; CARS-Cyp
Homo sapiens	RefSeq	NM_015879.1	ILMN_166170	ST8SIA3	NM_015879.2	NM_015879.2		51046	110815854	NM_015879.2	ST8SIA3	NP_056963.2	ILMN_1697301	0002070014	S	1444	CTGTACCGAATGCATGGGGAAGGGCTCACCAAGCTGACTCTGTCACACTG	18	+	53178450-53178499	18q21.31a	Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (ST8SIA3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [pmid 10766765] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 9073076] [evidence TAS]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [pmid 10766765] [evidence TAS]	Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IEA]	ST8Sia III; SIAT8C	ST8Sia III; SIAT8C
Homo sapiens	RefSeq	Hs.23172	ILMN_166170	ST8SIA3	NM_015879.2	NM_015879.2		51046	110815854	NM_015879.2	ST8SIA3	NP_056963.2	ILMN_1855910	0000160202	S	9878	CAAGCTGCCAGAATGTGAGGGCCACAGAGACCCAAGAGAAGCCAGCACTG	18	+	53186884-53186933	18q21.31a	Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (ST8SIA3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [pmid 10766765] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 9073076] [evidence TAS]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [pmid 10766765] [evidence TAS]	Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IEA]	ST8Sia III; SIAT8C	
Homo sapiens	RefSeq	NM_203471.1	ILMN_14725	LGALS14	NM_020129.2	NM_020129.2		56891	45439323	NM_020129.2	LGALS14	NP_064514.1	ILMN_1698318	0005260035	A	538	TGGCCAACGCATTTACAACTTTGCCCATCGATTCCCGCCAGCATCTGTGA	19	+	40199848-40199897	19q13.2b	Homo sapiens lectin, galactoside-binding, soluble, 14 (LGALS14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	MGC22235; CLC2; PPL13	MGC22235; CLC2; PPL13
Homo sapiens	RefSeq	NM_020129.2	ILMN_14725	LGALS14	NM_020129.2	NM_020129.2		56891	45439323	NM_020129.2	LGALS14	NP_064514.1	ILMN_2397223	0003800315	A	94	CTGGGAGGGGCTTGGAATCTGGCATGAAGCCAAAGGGCATCTCTGAGTTG	19	+	40195039-40195088	19q13.2b	Homo sapiens lectin, galactoside-binding, soluble, 14 (LGALS14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	MGC22235; CLC2; PPL13	MGC22235; CLC2; PPL13
Homo sapiens	RefSeq	NM_001166478.1	ILMN_387741	DEFB133	NM_001166478.1	NM_001166478.1		403339	262050619	NM_001166478.1	DEFB133	NP_001159950.1	ILMN_3308325	0000650386	S	31	TTTTCTTTCTGGTCCCCATTGCCACCAGGGTGAAATGTGCCGTGAAAGAC					Homo sapiens defensin, beta 133 (DEFB133), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Homo sapiens	RefSeq	NM_002410.2	ILMN_166008	MGAT5	NM_002410.3	NM_002410.3		4249	126352678	NM_002410.3	MGAT5	NP_002401.1	ILMN_1731049	0006400491	S	2242	TAAGCACTGTGTGTTTCAAGGTGACCTCCTGCTCTTCAGCTGTGCAGGCG	2	+	134922759-134922808	2q21.2d-q21.3a	Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase (MGAT5), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence NAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl,1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-(N-acetyl-beta-D-glucosaminyl-1,6)-1,2-alpha-D-mannosyl-1,3(6)-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6(3))-beta-D-mannosyl-1,4-N-acetyl-beta-D-glucosaminyl-R. Only branched mannose glycopeptides with non-reducing N-acetylglucosamine terminal residues act as acceptors [goid 30144] [pmid 8292036] [evidence NAS]	GNT-V	GNT-V
Homo sapiens	RefSeq	XM_943427.1	ILMN_137158	AKR1C2	XM_943427.1	XM_943427.1		1646	89031718	XM_943427.1	AKR1C2	XP_948520.1	ILMN_1730191	0007200563	I	620	GGAGGACATAGGGATTTTAACATGGAAGAAGAGCCCTAAACATAACTCCT				10p15.1c	PREDICTED: Homo sapiens aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III), transcript variant 8 (AKR1C2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [pmid 8573067] [evidence IDA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 8573067] [evidence IDA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 8573067] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 32052] [pmid 8573067] [evidence IDA]; Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+ [goid 47026] [evidence IEA]; Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol [goid 47115] [pmid 8573067] [evidence IDA]		
Homo sapiens	RefSeq	NM_134447.1	ILMN_5049	C19ORF2	NM_134447.1	NM_134447.1		8725	19924160	NM_134447.1	C19orf2	NP_604431.1	ILMN_1798728	0004220364	A	2069	GGTTTTGCGGCTAGTTGGCTATTCAAGAAACCTCGCCCCTCTGAATGTCA	19	+	30506442-30506491	19q12c	Homo sapiens chromosome 19 open reading frame 2 (C19orf2), transcript variant 2, mRNA.	A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	URI; FLJ10575; RMP; NNX3	FLJ10575; RMP; NNX3; URI
Homo sapiens	RefSeq	NM_134447.1	ILMN_5049	C19ORF2	NM_134447.1	NM_134447.1		8725	19924160	NM_134447.1	C19orf2	NP_604431.1	ILMN_2406892	0002600040	A	1331	GCCACTTGCAGTGACACCAGTGAGAGCATTTTGGAAGAGGAACCACAAGA	19	+	30503349-30503398	19q12c	Homo sapiens chromosome 19 open reading frame 2 (C19orf2), transcript variant 2, mRNA.	A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	URI; FLJ10575; RMP; NNX3	FLJ10575; RMP; NNX3; URI
Homo sapiens	RefSeq	NM_181642.2	ILMN_23764	SPINT1	NM_003710.3	NM_003710.3		6692	74027263	NM_003710.3	SPINT1	NP_003701.1	ILMN_1724946	0001710468	A	2199	TTAATGCTGTGGCATGGGTGAAGAGGAGGGGAAGAGGCCTGTTTGGCCTC	15	+	38936918-38936967	15q15.1b	Homo sapiens serine peptidase inhibitor, Kunitz type 1 (SPINT1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9045658] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9045658] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 9045658] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713485] [evidence IPI]	MANSC2; HAI1; HAI	MANSC2; HAI1; HAI
Homo sapiens	RefSeq	NM_003710.3	ILMN_23764	SPINT1	NM_003710.3	NM_003710.3		6692	74027263	NM_003710.3	SPINT1	NP_003701.1	ILMN_2375992	0005860767	A	1816	AACTTTGGAACCAGACTCTTGCCTGTTTCCCAGGCCCACTGTGCCTCAGA	15	+	38936535-38936584	15q15.1b	Homo sapiens serine peptidase inhibitor, Kunitz type 1 (SPINT1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9045658] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9045658] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 9045658] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713485] [evidence IPI]	MANSC2; HAI1; HAI	MANSC2; HAI1; HAI
Homo sapiens	RefSeq	NM_003866.1	ILMN_22637	INPP4B	NM_003866.1	NM_003866.1		8821	4504706	NM_003866.1	INPP4B	NP_003857.1	ILMN_2198878	0004860762	S	2701	CTTGAGAGATGAGCACCAGTTACACAAGGACTTCTTTATCCGAGCGCTGG	4	-	143222645-143222694	4q31.21b-q31.21c	Homo sapiens inositol polyphosphate-4-phosphatase, type II, 105kDa (INPP4B), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9295334] [evidence TAS]	Catalysis of the reaction: 1-phosphatidyl-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 16316] [pmid 9295334] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate [goid 34597] [evidence IEA]	MGC132014	MGC132014
Homo sapiens	RefSeq	XM_933278.1	ILMN_166111	LOC730063	XM_001132263.1	XM_001132263.1		730063	113416524	XM_001132263.1	LOC730063	XP_001132263.1	ILMN_1698512	0002760253	A	563	GGCCCTTCCACTCTCGGGGACAGGCGAAACCTCTTTGTCTCTGCCTCGGC	5	-	43638806-43638855	5p12b	PREDICTED: Homo sapiens hypothetical protein LOC730063 (LOC730063), mRNA.					
Homo sapiens	RefSeq	NM_024731.2	ILMN_2072	KLHL36	NM_024731.2	NM_024731.2		79786	31542245	NM_024731.2	KLHL36	NP_079007.2	ILMN_1703314	0002000767	S	2013	ACCATCCTCACCGTCACCTCCCAGGGCTCTGTAGACCAGCAGCAACTTCT	16	+	83253261-83253310	16q24.1a	Homo sapiens kelch-like 36 (Drosophila) (KLHL36), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ12543	FLJ12543
Homo sapiens	RefSeq	NR_002730.1	ILMN_5647	BP75	NR_002730.1	NR_002730.1		23629	84872010	NR_002730.1	BP75		ILMN_2147920	0000070736	S	78	GAAGACTGGGACTTCCCCATCCTGTGGATCCCATTGTAGGAGAGCCAGAA	6	+	118929899-118929948	6q22.31a	Homo sapiens bromodomain containing protein 75 kDa pseudogene (BP75) on chromosome 6.					
Homo sapiens	RefSeq	NR_002448.1	ILMN_20691	SNORD36A	NR_002448.1	NR_002448.1		26815	72255553	NR_002448.1	SNORD36A		ILMN_2135175	0002750446	S	21	CACTGAATTCAACCTTGAAGTGCGAATCCATGAGCTTTTTAACCCTGAGC	9	+	135207152-135207201	9q34.2a	Homo sapiens small nucleolar RNA, C/D box 36A (SNORD36A), small nucleolar RNA.				RNU36A; U36a	RNU36A; U36a
Homo sapiens	RefSeq	XM_001715046.1	ILMN_335062	LOC729154	XM_001715046.1	XM_001715046.1		729154	169208603	XM_001715046.1	LOC729154	XP_001715098.1	ILMN_3297582	0001470280	M	959	CAGAACCAGAACGATCTCCGAGATGGAGAGTGACGGGGTCTGGCACGAGC				15q15.2a	PREDICTED: Homo sapiens hypothetical LOC729154 (LOC729154), mRNA.					
Homo sapiens	RefSeq	XM_001715046.1	ILMN_335062	LOC729154	XM_001715046.1	XM_001715046.1		729154	169208603	XM_001715046.1	LOC729154	XP_001715098.1	ILMN_3221055	0000620463	A	893	TCCAAGTTCAGTGAAGACACCCAAAGCCTGGGGCAAAACGAGGCGGCAGC				15q15.2a	PREDICTED: Homo sapiens hypothetical LOC729154 (LOC729154), mRNA.					
Homo sapiens	RefSeq	NM_016078.3	ILMN_18985	FAM18B	NM_016078.4	NM_016078.4		51030	148747573	NM_016078.4	FAM18B	NP_057162.4	ILMN_1661593	0005690762	I	866	GATTTGTTCTGTGGTGTAGGTATGCACATTCCATAGGTATGCACACGGCC	17	+	18649828-18649877	17p11.2f	Homo sapiens family with sequence similarity 18, member B (FAM18B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			NPD008; YDR084C; FLJ46240; CGI-148	NPD008; YDR084C; FLJ46240; CGI-148
Homo sapiens	RefSeq	NM_016078.3	ILMN_18985	FAM18B	NM_016078.4	NM_016078.4		51030	148747573	NM_016078.4	FAM18B	NP_057162.4	ILMN_1751492	0000060634	A	517	AGGTGCCAACCTGTATGGTTACATCAGGTGTAAGGTGCGCAGCAGAAAGC	17	+	18648205-18648254	17p11.2f	Homo sapiens family with sequence similarity 18, member B (FAM18B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			NPD008; YDR084C; FLJ46240; CGI-148	NPD008; YDR084C; FLJ46240; CGI-148
Homo sapiens	RefSeq	NM_187841.1	ILMN_24201	TRIM54	NM_187841.1	NM_187841.1		57159	34878869	NM_187841.1	TRIM54	NP_912730.2	ILMN_2412046	0003850239	A	937	ACCGTAAGGGTGGAGCACGTGGCCGAAATGCTGCGGACCATCGACTTCCA	2	+	27382655-27382704	2p23.3a	Homo sapiens tripartite motif-containing 54 (TRIM54), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 11243782] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [pmid 11243782] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [pmid 11243782] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11243782] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 11243782] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11243782] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF30; MURF; MURF-3	RNF30; MURF; MURF-3
Homo sapiens	RefSeq	NR_003071.1	ILMN_177959	SNORD90	NR_003071.1	NR_003071.1		692206	96974952	NR_003071.1	SNORD90		ILMN_3240108	0003360176	S	35	GGCAGATTCTGAGGTGAAAATTTAATTCATCACTGATACTCCTACTGTGG	9	-	125642514-125642563	9q33.2b	Homo sapiens small nucleolar RNA, C/D box 90 (SNORD90), small nucleolar RNA.				HBII-295	HBII-295
Homo sapiens	RefSeq	XM_942308.1	ILMN_137431	C7ORF28A	XM_942308.1	XM_942308.1		51622	89077035	XM_942308.1	C7orf28A	XP_947401.1	ILMN_1784166	0006480192	I	962	CCTGAGATGCAGTGGGCCAAGGGGTATGTTAAAACACTGTGACGAGTTCA				7p22.1b	PREDICTED: Homo sapiens chromosome 7 open reading frame 28A (C7orf28A), mRNA.					
Homo sapiens	RefSeq	NM_206956.1	ILMN_24135	PRAME	NM_206955.1	NM_206955.1		23532	46249370	NM_206955.1	PRAME	NP_996838.1	ILMN_1700031	0004480301	A	1777	TGGGGACAGAACCTTCTATGACCCGGAGCCCATCCTGTGCCCCTGTTTCA	22	-	22890499-22890548	22q11.22b	Homo sapiens preferentially expressed antigen in melanoma (PRAME), transcript variant 4, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	MAPE; OIP4	MAPE; OIP4
Homo sapiens	RefSeq	NM_206955.1	ILMN_24135	PRAME	NM_206955.1	NM_206955.1		23532	46249370	NM_206955.1	PRAME	NP_996838.1	ILMN_2306033	0002690519	A	1615	GACCCACGTGCTGTATCCTGTCCCCCTGGAGAGTTATGAGGACATCCATG	22	-	22890661-22890710	22q11.22b	Homo sapiens preferentially expressed antigen in melanoma (PRAME), transcript variant 4, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	MAPE; OIP4	MAPE; OIP4
Homo sapiens	RefSeq	NM_004785.3	ILMN_3427	SLC9A3R2	NM_004785.3	NM_004785.3		9351	71897228	NM_004785.3	SLC9A3R2	NP_004776.3	ILMN_1765833	0002970411	S	1154	TCAGTGGACTGGAGGGTGGTCCTGCCATTGCCCAGAAATCAGCCCCAGCC	16	+	2028081-2028130	16p13.3e	Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2 (SLC9A3R2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9054412] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11786550] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9748260] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11786550] [evidence IPI]	NHERF2; NHE3RF2; NHERF-2; E3KARP; MGC104639; SIP1; SIP-1; OCTS2; TKA-1	NHERF2; NHE3RF2; NHERF-2; E3KARP; MGC104639; SIP1; SIP-1; OCTS2; TKA-1
Homo sapiens	RefSeq	XR_001272.1	ILMN_171850	PMS2CL	XR_017703.1	XR_017703.1		441194	113418931	XR_017703.1	PMS2CL		ILMN_1798166	0002340079	I	32	AGCAGAACAGCCTTGGTGAGGTGGACAAGAGGGGACCTCGCGAGCAGACG				7p22.1a	PREDICTED: Homo sapiens PMS2-C terminal-like (PMS2CL), misc RNA.		A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]		
Homo sapiens	RefSeq	NM_053054.2	ILMN_5805	CATSPER1	NM_053054.2	NM_053054.2		117144	26051219	NM_053054.2	CATSPER1	NP_444282.2	ILMN_1789394	0006590544	S	2468	CAGGAATTGACCCCAGGAGGACACCAGATACAGACTTCAGCCCCTGGCAG	11	-	65540896-65540936:65540937-65540945	11q13.1d	Homo sapiens cation channel, sperm associated 1 (CATSPER1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	Cell motility due to movement of cilia or flagella [goid 1539] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51925] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CATSPER; MGC33368; MGC33335	CATSPER; MGC33368; MGC33335
Homo sapiens	RefSeq	NM_022132.3	ILMN_19445	MCCC2	NM_022132.3	NM_022132.3		64087	14251210	NM_022132.3	MCCC2	NP_071415.1	ILMN_1769264	0007040114	S	2219	GCATAAAGTGCCCTCACACTGCTGTGCAGCCATTACCACCATTCATCTCC	5	+	70988871-70988920	5q13.2b	Homo sapiens methylcrotonoyl-Coenzyme A carboxylase 2 (beta) (MCCC2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11181649] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of leucine, 2-amino-4-methylpentanoic acid [goid 6552] [pmid 11170888] [evidence TAS]	Catalysis of the reaction: ATP + 3-methylcrotonyl-CoA + HCO3- = ADP + phosphate + 3-methylglutaconyl-CoA [goid 4485] [pmid 11170888] [evidence NAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MCCB	MCCB
Homo sapiens	RefSeq	XR_036992.1	ILMN_338519	LOC100132366	XR_036992.1	XR_036992.1		100132366	169208305	XR_036992.1	LOC100132366		ILMN_3238516	0001190114	S	1550	AGTAGTGCTTCAGTAGCGCTGGCCAGGGACCCAGCCTTCAGTCACACGCT	15	-	83551953-83552002	15q25.3a	PREDICTED: Homo sapiens misc_RNA (LOC100132366), miscRNA.					
Homo sapiens	RefSeq	NM_175709.2	ILMN_22413	CBX7	NM_175709.2	NM_175709.2		23492	46852393	NM_175709.2	CBX7	NP_783640.1	ILMN_1657361	0001500747	S	3609	CTGGGGGCAGGCGCTGTGCTTCTGTGAGGTGGTTTAGCTTTTGCTTTCGA	22	-	37857028-37857077	22q13.1c	Homo sapiens chromobox homolog 7 (CBX7), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]		
Homo sapiens	Unigene	Hs.129160	ILMN_76743	HS.129160	Hs.129160		Hs.129160		27839718	BX115952			ILMN_1825773	0005080598	S	148	ACCTCATTGCTGATGGAGAAGACCCCTTTTCCTTTGCTTGTCTGTTTTGC	1	-	117709407-117709456		BX115952 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGp998F164069, mRNA sequence					
Homo sapiens	RefSeq	NR_002314.3	ILMN_372157	FLJ40434	NR_002314.3	NR_002314.3		163742	209180470	NR_002314.3	FLJ40434		ILMN_3249524	0003420021	S	856	TCAAGGTCTATTTCAAGCTGCCTCGCCCTCCCGTGGCTCAAGCGCCCGAA	1	-	53904062-53904111	1p32.3c	Homo sapiens hypothetical FLJ40434 (FLJ40434), non-coding RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_020475.2	ILMN_29905	ANK1	NM_020475.2	NM_020475.2		286	70780352	NM_020475.2	ANK1	NP_065208.2	ILMN_2317186	0002900402	A	7318	CGGGACACACTTAAACCTTCCAAGTAGCACAGAAGCCCCCTCCACGTCAG	8	-	41630801-41630850	8p11.21b	Homo sapiens ankyrin 1, erythrocytic (ANK1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 1833445] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9430667] [evidence NAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 12409278] [evidence NAS]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 1833445] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 9430667] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The maintenance of the apicobasal polarity of an epithelial cell [goid 45199] [pmid 11427698] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 8640229] [evidence TAS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 11427698] [evidence TAS]; Interacting selectively with any enzyme [goid 19899] [pmid 11427698] [evidence TAS]; Interacting selectively with spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers [goid 30507] [pmid 8640229] [evidence NAS]	SPH2; ANK; SPH1	SPH2; ANK; SPH1
Homo sapiens	RefSeq	XM_001719856.1	ILMN_340109	LOC400558	XM_001719856.1	XM_001719856.1		400558	169209573	XM_001719856.1	LOC400558	XP_001719908.1	ILMN_3281877	0006250450	M	426	GTCAGACAGGGGCACTTGCCCAGGGGCTCCTCAGGGAGCAGTTGGTACCT				16q24.3a	PREDICTED: Homo sapiens FLJ27068 protein (LOC400558), mRNA.					
Homo sapiens	RefSeq	NM_024828.2	ILMN_22579	C9ORF82	NM_024828.2	NM_024828.2		79886	48976053	NM_024828.2	C9orf82	NP_079104.2	ILMN_1755222	0000380348	S	2663	GTAAAACAGGTCTGAGGGCTTTGTAGATGATTAAAGTCTCCACCTTCATG	9	-	26841435-26841484	9p21.2a	Homo sapiens chromosome 9 open reading frame 82 (C9orf82), mRNA.				RP11-337A23.1; FLJ13657	RP11-337A23.1; FLJ13657
Homo sapiens	RefSeq	NM_000358.1	ILMN_24587	TGFBI	NM_000358.1	NM_000358.1		7045	4507466	NM_000358.1	TGFBI	NP_000349.1	ILMN_1663866	0007650358	S	2456	CCAGCCTCATGGGAAGTCCTGGCACAGTTTTTGTAAAGCCCTTGCACAGC	5	+	135427171-135427220	5q31.1f-q31.2a	Homo sapiens transforming growth factor, beta-induced, 68kDa (TGFBI), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1388724] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 8024701] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9463327] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 1388724] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [pmid 1388724] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CSD1; CSD2; CDB1; CDGG1; EBMD; CSD3; BIGH3; LCD1; CDG2; CSD	CSD1; CSD2; CDB1; CDGG1; EBMD; CSD3; BIGH3; LCD1; CDG2; CSD
Homo sapiens	RefSeq	NM_003141.3	ILMN_162677	TRIM21	NM_003141.3	NM_003141.3		6737	56549143	NM_003141.3	TRIM21	NP_003132.2	ILMN_1678054	0006560075	S	1682	GTCACTTCACCATCAACATTCCTGCCCCAGATGGCTTTGTGATTCCCTCC	11	-	4406324-4406373	11p15.4d	Homo sapiens tripartite motif-containing 21 (TRIM21), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [pmid 7832745] [evidence TAS]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11461834] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF81; RO52; SSA1; SSA	RNF81; RO52; SSA1; SSA
Homo sapiens	RefSeq	NM_001129885.1	ILMN_366083	CPSF4L	NM_001129885.1	NM_001129885.1		642843	193788658	NM_001129885.1	CPSF4L	NP_001123357.1	ILMN_3246304	0000450041	S	255	ATGGTGGTATGCAAGCACTGGCTCCGGGGGCTCTGCAAGAAGGGTGATCA	17	-	71253884-71253933	17q25.1a	Homo sapiens cleavage and polyadenylation specific factor 4-like (CPSF4L), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_002167.2	ILMN_6829	ID3	NM_002167.2	NM_002167.2		3399	32171181	NM_002167.2	ID3	NP_002158.2	ILMN_1732296	0007570324	S	828	CCCCAACTTCGCCCTGCCCACTTGACTTCACCAAATCCCTTCCTGGAGAC	1	-	23757369-23757418	1p36.12a	Homo sapiens inhibitor of DNA binding 3, dominant negative helix-loop-helix protein (ID3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1628620] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8437843] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	HEIR-1	HEIR-1
Homo sapiens	Unigene	Hs.544353	ILMN_107777	HS.544353	Hs.544353		Hs.544353		2984984	AA876183			ILMN_1897635	0001690672	S	161	CCAAGGGGTGAAGATTGCACAGGCTCAAGTCCAGCCGTCTCTCCAGCAGA					nx25c07.s1 NCI_CGAP_GC4 Homo sapiens cDNA clone IMAGE:1257132 3, mRNA sequence					
Homo sapiens	RefSeq	XM_937030.1	ILMN_12747	ZNF407	NM_017757.2	NM_017757.2		55628	134133287	NM_017757.2	ZNF407	NP_060227.2	ILMN_1741300	0000770537	S	7765	GCCAGCATGGTCTGTGTTTCCTTGTGGATTCACCTGTGGCCCTGCTGTGG	18	+	70906373-70906422	18q22.3d	Homo sapiens zinc finger protein 407 (ZNF407), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20307; FLJ13839; KIAA1703	
Homo sapiens	RefSeq	NM_017757.1	ILMN_12747	ZNF407	NM_017757.2	NM_017757.2		55628	134133287	NM_017757.2	ZNF407	NP_060227.2	ILMN_1753856	0006400706	S	5150	GCCACGCCCTCACCAAGCATCGCAGACAGCACACAGGAGAAAAACCTTTC	18	+	70722028-70722063:70730862-70730875	18q22.3d	Homo sapiens zinc finger protein 407 (ZNF407), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20307; FLJ13839; KIAA1703	FLJ20307; KIAA1703; FLJ13839
Homo sapiens	RefSeq	NM_001148.3	ILMN_183650	ANK2	NM_001148.3	NM_001148.3		287	52426734	NM_001148.3	ANK2	NP_001139.3	ILMN_1652729	0004920441	I	10233	AACCCGAAGTTACACTGAGACAGAAACAGAGAGCAGAGAGAGGGCCGAGG	4	+	114499441-114499490	4q26a	Homo sapiens ankyrin 2, neuronal (ANK2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12527750] [evidence IPI]	DKFZp686P0948; FLJ38277; DKFZp686M09125; LQT4	DKFZp686P0948; FLJ38277; DKFZp686M09125; LQT4
Homo sapiens	RefSeq	XM_938115.2	ILMN_32553	LOC649034	XM_938115.2	XM_938115.2		649034	169218034	XM_938115.2	LOC649034	XP_943208.2	ILMN_3248579	0002230747	S	167	GTTGGGCAAATGAATGCGGGACGAATGAGTGCGTGAACGAGAGGAACAGA					PREDICTED: Homo sapiens similar to pepsinogen 3, group I (LOC649034), mRNA.					
Homo sapiens	RefSeq	XM_943690.1	ILMN_44848	SYT7	XM_943690.1	XM_943690.1		9066	89034799	XM_943690.1	SYT7	XP_948783.1	ILMN_1782181	0006580026	I	694	GCCGTCTGAGCCTCATCTGTAAGATGGACGAGATGCCATTCACCTTGGAG				11q12.2b	PREDICTED: Homo sapiens synaptotagmin VII, transcript variant 4 (SYT7), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IEA]			
Homo sapiens	Unigene	Hs.209244	ILMN_82084	HS.209244	Hs.209244		Hs.209244		27839753	BX116033			ILMN_1863962	0005890594	S	285	TGCCGTATTCTTGGTGTCTGGAGCAGTGCCTGACCTGTGGCGGGTGCTTA	16	-	1289919-1289968		BX116033 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGp998A155622, mRNA sequence					
Homo sapiens	RefSeq	NM_003863.2	ILMN_27402	DPM2	NM_003863.2	NM_003863.2		8818	24497593	NM_003863.2	DPM2	NP_003854.1	ILMN_1732049	0001850041	A	565	TCAGACTCCCTGCCACCTTTTCCCCTGGGTTCTGCCGTCTTGCCTCACTT	9	-	129737498-129737547	9q34.11a	Homo sapiens dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (DPM2), mRNA.	An enzyme complex that catalyzes the transfer of GlcNAc from UDP-GlcNAc to an acceptor phosphatidylinositol, the first step in the production of GPI anchors for cell surface proteins. The complex contains PIG-A, PIG-C, PIG-H, PIG-Q, PIG-P, and DPM2 in human, and Eri1p, Gpi1p, Gpi2p, Gpi15p, Gpi19p, and Spt14p in budding yeast [goid 506] [pmid 16280320] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 16280320] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10835346] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]; A complex that posseses mannosyltransferase activity [goid 31501] [pmid 16280320] [evidence TAS]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass [goid 9059] [evidence IEA]; The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]; The glycosylation of a peptidyl-tryptophan residue by the transfer of alpha-mannopyranose from dolichyl-activated mannose to the indole ring [goid 18406] [pmid 16280320] [evidence TAS]; The transfer of mannose from dolichyl activated mannose to the hydroxyl group of a seryl or threonyl residue of a protein acceptor molecule, to form an O-linked protein-sugar linkage [goid 35269] [pmid 16280320] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass [goid 9059] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass [goid 9059] [evidence IEA]	Catalysis of the reaction: GDP-mannose + dolichyl phosphate = GDP + dolichyl D-mannosyl phosphate [goid 4582] [pmid 10835346] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10835346] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC111193; MGC21559	MGC111193; MGC21559
Homo sapiens	RefSeq	NM_003608.2	ILMN_19139	GPR65	NM_003608.2	NM_003608.2		8477	33695103	NM_003608.2	GPR65	NP_003599.2	ILMN_1734740	0006550273	S	1139	CCGGAAAGTCTACCAAGCTGTGCGGCACAATAAAGCCACGGAAAACAAGG	14	+	87547553-87547602	14q31.3c	Homo sapiens G protein-coupled receptor 65 (GPR65), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9655242] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9655242] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9655242] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9655242] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9655242] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	TDAG8; hTDAG8	TDAG8; hTDAG8
Homo sapiens	RefSeq	NM_003608.2	ILMN_19139	GPR65	NM_003608.2	NM_003608.2		8477	33695103	NM_003608.2	GPR65	NP_003599.2	ILMN_2232121	0007570367	S	1624	CTAGCATGTGAGGGGACTAAGTGTTCTCAGAGTGATGTTTTAATCCAGTC	14	+	87548038-87548087	14q31.3c	Homo sapiens G protein-coupled receptor 65 (GPR65), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9655242] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9655242] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9655242] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9655242] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9655242] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	TDAG8; hTDAG8	TDAG8; hTDAG8
Homo sapiens	RefSeq	XM_932252.1	ILMN_42374	LOC644577	XM_932252.1	XM_932252.1		644577	88943035	XM_932252.1	LOC644577	XP_937345.1	ILMN_1654588	0004230424	S	69	CACCTGTGGAAGAGTGAAAGCAATAGGATTGGGCGGAGCAGGAAGTCGGC	1	+	142339936-142339985		PREDICTED: Homo sapiens hypothetical protein LOC644577 (LOC644577), mRNA.					
Homo sapiens	RefSeq	NM_182506.2	ILMN_629	MAGEB10	NM_182506.2	NM_182506.2		139422	73623440	NM_182506.2	MAGEB10	NP_872312.2	ILMN_1703034	0000150746	S	1311	GCACATTCTGAGCTGTGGGAGGTCAGGGTGGGACTGGAGACAACACAGTG	X	+	27750428-27750477	Xp21.3b	Homo sapiens melanoma antigen family B, 10 (MAGEB10), mRNA.				FLJ32965; MGC120394	FLJ32965; MGC120394
Homo sapiens	RefSeq	XR_015610.2	ILMN_183755	LOC728533	XR_015610.2	XR_015610.2		728533	169213283	XR_015610.2	LOC728533		ILMN_3226045	0002750220	A	2180	CTATACTCCTTTGGCCCATAGCTAAGGTCATCCTTCCCCACAGGGGTGGC	19	+	42976354-42976403	19q13.12c	PREDICTED: Homo sapiens misc_RNA (LOC728533), miscRNA.					
Homo sapiens	RefSeq	NM_004490.2	ILMN_164455	GRB14	NM_004490.2	NM_004490.2		2888	71979662	NM_004490.2	GRB14	NP_004481.2	ILMN_2413816	0002120326	A	2015	CCAGTAGAAGATGACGGTGAAATGTTCCACACACTGGATGATGGCCACAC	2	-	165349645-165349692:165350941-165350942	2q24.3b	Homo sapiens growth factor receptor-bound protein 14 (GRB14), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8647858] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8647858] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_004490.2	ILMN_164455	GRB14	NM_004490.2	NM_004490.2		2888	71979662	NM_004490.2	GRB14	NP_004481.2	ILMN_1700037	0004590014	I	414	AGGCGGCGAGGCCACCACACCTGCAGAGCGCTCGGGCTGCCTAGCCGGCA	2	-	165477897-165477946	2q24.3b	Homo sapiens growth factor receptor-bound protein 14 (GRB14), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8647858] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8647858] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_004490.2	ILMN_164455	GRB14	NM_004490.2	NM_004490.2		2888	71979662	NM_004490.2	GRB14	NP_004481.2	ILMN_1793832	0001660689	A	1026	GAACAATAGAAGACCACGAACTGGTGATTGAAGTGCTATCCAACTGGGGG	2	-	165383592-165383641	2q24.3b	Homo sapiens growth factor receptor-bound protein 14 (GRB14), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8647858] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8647858] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XR_037607.1	ILMN_337676	LOC100128717	XR_037607.1	XR_037607.1		100128717	169211176	XR_037607.1	LOC100128717		ILMN_3179628	0003140370	A	1035	CAATCCCAAATACTGCCTGTGAACAAGACGGAGATGACTGGGGAGCCAAC	17	-	22117090-22117139	17p11.1c	PREDICTED: Homo sapiens misc_RNA (LOC100128717), miscRNA.					
Homo sapiens	RefSeq	NM_021812.1	ILMN_27087	BPESC1	NM_021812.1	NM_021812.1		60467	11141882	NM_021812.1	BPESC1	NP_068584.1	ILMN_1793049	0002060392	S	3144	GAGGTTGGGGAAGTGGGTTGGGGTACAGACGAAACAGGAGTAGGTGTGAG	3	+	140326325-140326374		Homo sapiens blepharophimosis, epicanthus inversus and ptosis, candidate 1 (BPESC1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	XR_018394.2	ILMN_162197	LOC440063	XR_018394.2	XR_018394.2		440063	169203581	XR_018394.2	LOC440063		ILMN_3208715	0000010441	A	147	GGCTTCCTGCTTTCACAGAAATATTCCAGGGTTTATGTGTCAGGGTAGTG				11q22.1c	PREDICTED: Homo sapiens misc_RNA (LOC440063), miscRNA.					
Homo sapiens	RefSeq	NM_134261.1	ILMN_15778	RORA	NM_134261.1	NM_134261.1		6095	19743902	NM_134261.1	RORA	NP_599023.1	ILMN_1805614	0004760072	I	216	CGGTGCGCAGACAGAGCTATTCCAGCACCAGCAGAGGTATCTCAGTAACG	15	-	58758163-58758177:59308544-59308578	15q22.2a-q22.2b	Homo sapiens RAR-related orphan receptor A (RORA), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7926749] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 17545671] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 17545671] [evidence IDA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR1F1; MGC119326; ROR2; RZRA; ROR1; MGC119329; ROR3	NR1F1; MGC119326; ROR2; RZRA; ROR1; MGC119329; ROR3
Homo sapiens	RefSeq	NM_021089.1	ILMN_12266	ZNF8	NM_021089.1	NM_021089.1		7554	33438574	NM_021089.1	ZNF8	NP_066575.1	ILMN_1785379	0002850072	S	1917	GTGTACTCATGGAAGGAGGGGCTGGGGGTAGAAATGTCATGGGTGACTTC	19	+	63498773-63498822	19q13.43c	Homo sapiens zinc finger protein 8 (ZNF8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2106481] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2106481] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp128; HF.18	Zfp128; HF.18
Homo sapiens	RefSeq	NM_001025090.1	ILMN_3041	MBP	NM_001025090.1	NM_001025090.1		4155	68509927	NM_001025090.1	MBP	NP_001020261.1	ILMN_2398939	0001340678	A	193	AGACACGGGCATCCTTGACTCCATCGGGCGCTTCTTTGGCGGTGACAGGG	18	-	74728813-74728862	18q23b	Homo sapiens myelin basic protein (MBP), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7504278] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 2434243] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 2434243] [evidence TAS]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [pmid 2434243] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]	MGC99675	MGC99675
Homo sapiens	RefSeq	XM_496082.2	ILMN_173730	LOC730145	XM_001132646.1	XM_001132646.1		730145	113425353	XM_001132646.1	LOC730145	XP_001132646.1	ILMN_1725186	0001740088	S	61	CTCTGGACTCCTGCAGCCGCCAAAACGGCCAATCGTGTTTAAGGAGAAAC	15	+	80524436-80524463:80525886-80525907	15q25.2a	PREDICTED: Homo sapiens hypothetical protein LOC730145 (LOC730145), mRNA.					
Homo sapiens	RefSeq	NM_020809.2	ILMN_27302	ARHGAP20	NM_020809.2	NM_020809.2		57569	51479147	NM_020809.2	ARHGAP20	NP_065860.2	ILMN_1782761	0006480593	S	5641	CAGCAGGGACTCCCCTTTCCCTTAGGGCATACTACTGTCAGTCAGAACTG	11	-	110448264-110448313	11q22.3d-q23.1a	Homo sapiens Rho GTPase activating protein 20 (ARHGAP20), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	KIAA1391; RARHOGAP	KIAA1391; RARHOGAP
Homo sapiens	RefSeq	XM_942150.1	ILMN_40224	LOC652615	XM_942150.1	XM_942150.1		652615	89072185	XM_942150.1	LOC652615	XP_947243.1	ILMN_1773797	0002570553	S	59	TCTGTGCCCTTTATCCGCACTTCCCAGCTCACAGCACTGACAACCGGTGA					PREDICTED: Homo sapiens similar to Anaphase promoting complex subunit 1 (APC1) (Cyclosome subunit 1) (Protein Tsg24) (Mitotic checkpoint regulator) (LOC652615), mRNA.					
Homo sapiens	Unigene	Hs.538376	ILMN_103861	HS.538376	Hs.538376		Hs.538376		9439231	BE439861			ILMN_1903713	0004390019	S	507	TCACTCTGGGAAGCAGGCACTTCTGAGCAGCATGACACACTGTGGCCTTG	10	-	95504226-95504275		HTM1-443F HTM1 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_001001955.1	ILMN_16650	OR4C13	NM_001001955.1	NM_001001955.1		283092	53828679	NM_001001955.1	OR4C13	NP_001001955.1	ILMN_1730984	0006620204	S	614	GCCTGTTAAACTGTCTCTTGCTCCTGGTCTCCTGCGTGGTCATACTGTAC	11	+	49931164-49931213	11p11.12c	Homo sapiens olfactory receptor, family 4, subfamily C, member 13 (OR4C13), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_016123.1	ILMN_5035	IRAK4	NM_016123.1	NM_016123.1		51135	7705840	NM_016123.1	IRAK4	NP_057207.1	ILMN_1692352	0003310491	S	2366	GCTTCAGATGATAACCACAGCCTGGGCTGACACCTGGATTTCAGCTTTGC	12	+	42467719-42467768	12q12f	Homo sapiens interleukin-1 receptor-associated kinase 4 (IRAK4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16024789] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14625308] [evidence EXP]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286016] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12860405] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	NY-REN-64; REN64; IPD1	NY-REN-64; REN64; IPD1
Homo sapiens	RefSeq	XM_378349.3	ILMN_40387	LOC400019	XM_378349.3	XM_378349.3		400019	89035450	XM_378349.3	LOC400019	XP_378349.3	ILMN_1711385	0002230474	A	2644	GATTTGGGTGGGGACACAGATACAAACCATATCATTCCACTCCTGGCCCC	12	+	30847917-30847966		PREDICTED: Homo sapiens hypothetical LOC400019 (LOC400019), mRNA.					
Homo sapiens	RefSeq	NM_000651.3	ILMN_170199	CR1	NM_000651.4	NM_000651.4		1378	86793108	NM_000651.4	CR1	NP_000642.3	ILMN_1767193	0004200669	A	7313	GTATACTCTGGAAGGCAGTCCCTGGAGCCAGTGCCAGGCGGATGACAGAT	1	+	205859954-205860003	1q32.2a	Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) (CR1), transcript variant S, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2972794] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with any component or product of the complement cascade to initiate a change in cell activity [goid 4875] [pmid 2972794] [evidence TAS]	C3BR; CD35; KN	C3BR; CD35
Homo sapiens	RefSeq	XM_936516.1	ILMN_170199	CR1	NM_000651.4	NM_000651.4		1378	86793108	NM_000651.4	CR1	NP_000642.3	ILMN_1742601	0003940356	A	7345	GCCAGGCGGATGACAGATGGGACCCTCCTCTGGCCAAATGTACCTCTCGT	1	+	205859986-205860033:205861941-205861942	1q32.2a	Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) (CR1), transcript variant S, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2972794] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with any component or product of the complement cascade to initiate a change in cell activity [goid 4875] [pmid 2972794] [evidence TAS]	C3BR; CD35; KN	
Homo sapiens	RefSeq	XM_944458.1	ILMN_34960	LOC651012	XM_944458.1	XM_944458.1		651012	88979651	XM_944458.1	LOC651012	XP_949551.1	ILMN_1711615	0006420192	S	241	GGTCTGCCCACATCCCTGGTGGTAAGCCAAATGATCGTAAGTGGTAGAGC					PREDICTED: Homo sapiens hypothetical protein LOC651012 (LOC651012), mRNA.					
Homo sapiens	RefSeq	NM_015026.1	ILMN_19004	MON2	NM_015026.1	NM_015026.1		23041	55741668	NM_015026.1	MON2	NP_055841.1	ILMN_1697200	0002640100	S	5640	TCTTGGCAGCTGTTGTTGGCCTCCTTTAAATTCTACTTACCTGAGTTCAG	12	+	61272894-61272943	12q14.1d	Homo sapiens MON2 homolog (yeast) (MON2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]	MGC35493; KIAA1040	MGC35493; KIAA1040
Homo sapiens	RefSeq	XM_926487.1	ILMN_39354	LOC642815	XM_926487.1	XM_926487.1		642815	88963259	XM_926487.1	LOC642815	XP_931580.1	ILMN_1668359	0004050286	S	120	GCATTGGAGACTCGGTTTCAACAGGCACATTTTGCAGGGGGTCCAGCAGG	3	-	75864262-75864311		PREDICTED: Homo sapiens hypothetical protein LOC642815 (LOC642815), mRNA.					
Homo sapiens	RefSeq	NM_173493.1	ILMN_15156	PASD1	NM_173493.1	NM_173493.1		139135	27735094	NM_173493.1	PASD1	NP_775764.1	ILMN_1797295	0005700187	S	2832	GTCTGCCCCGCCCAGCTTTGCATATCCATGTTCTACCACAGGAAGGTGGC	X	+	150595536-150595585	Xq28d	Homo sapiens PAS domain containing 1 (PASD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Homo sapiens	RefSeq	NM_005826.2	ILMN_4888	HNRPR	NM_005826.2	NM_005826.2		10236	14141188	NM_005826.2	HNRPR	NP_005817.1	ILMN_2175894	0006560672	S	1856	ACAACCAACAGAACTGGGGTTCCCAACCCATCGCTCAGCAGCCGCTTCAG	1	-	23509620-23509669	1p36.12a	Homo sapiens heterogeneous nuclear ribonucleoprotein R (HNRPR), mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	hnRNP-R; FLJ25714; HNRNPR	hnRNP-R; FLJ25714; HNRNPR
Homo sapiens	RefSeq	NM_022733.1	ILMN_1697	SMAP2	NM_022733.1	NM_022733.1		64744	23943871	NM_022733.1	SMAP2	NP_073570.1	ILMN_2081682	0005550136	S	2417	AGGCAGAGGGCCGGGACAGCTTTCCTCTCAGTCATTGTTCACCCCACTTG	1	+	40661422-40661471	1p34.2d	Homo sapiens small ArfGAP2 (SMAP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SMAP1L; RP1-228H13.3	SMAP1L; RP1-228H13.3
Homo sapiens	RefSeq	NM_022733.1	ILMN_1697	SMAP2	NM_022733.1	NM_022733.1		64744	23943871	NM_022733.1	SMAP2	NP_073570.1	ILMN_1781468	0003930390	S	1957	GGATCTGGGGCTTCAGGACTTGCTGCTTCAGTCAGCTTTTATTAGCACCA	1	+	40660962-40661011	1p34.2d	Homo sapiens small ArfGAP2 (SMAP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SMAP1L; RP1-228H13.3	SMAP1L; RP1-228H13.3
Homo sapiens	RefSeq	XM_937009.1	ILMN_31253	LOC647955	XM_937009.1	XM_937009.1		647955	88950417	XM_937009.1	LOC647955	XP_942102.1	ILMN_1709395	0002320717	S	1389	TCCAGCAAAAGTGTGTGCCATTGTGTGGTGGTCGTGGAGGAGGGAGACCC					PREDICTED: Homo sapiens similar to Phosphorylase b kinase alpha regulatory chain, skeletal muscle isoform (Phosphorylase kinase alpha M subunit) (LOC647955), mRNA.					
Homo sapiens	RefSeq	XM_936636.1	ILMN_44102	LOC647585	XM_936636.1	XM_936636.1		647585	89065486	XM_936636.1	LOC647585	XP_941729.1	ILMN_1690356	0002320435	S	4	TACGCCAAGTGCTCCAGAGCCAGCCCCATCAGCAGGGGCCACAGCGGCAA					PREDICTED: Homo sapiens similar to GRB2-related adaptor protein (LOC647585), mRNA.					
Homo sapiens	Unigene	Hs.493016	ILMN_96574	HS.493016	Hs.493016		Hs.493016		23274143	BU608045			ILMN_1911026	0001570451	S	240	AGGGCTTACAACAATAACAGCTTCTCTCTGGCTTGTGTTCACCTCGTGCC					UI-CF-FN0-aes-n-12-0-UI.s1 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-aes-n-12-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_025262.2	ILMN_25292	LY6G5C	NM_025262.2	NM_025262.2		80741	50845402	NM_025262.2	LY6G5C	NP_079538.2	ILMN_1763467	0003520647	A	592	CTTGGTTGACGCCCTTCAGCACACTTACTGCTACTCTGTACCCCCAGCCC	6	-	31752515-31752564	6p21.33a	Homo sapiens lymphocyte antigen 6 complex, locus G5C (LY6G5C), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			C6orf20; LY6G5CA; G5c; NG33; LY6G5CB	C6orf20; LY6G5CA; G5c; NG33; LY6G5CB
Homo sapiens	RefSeq	NM_000816.2	ILMN_28864	GABRG2	NM_000816.2	NM_000816.2		2566	38788134	NM_000816.2	GABRG2	NP_000807.2	ILMN_2413964	0006020326	A	1851	GCCCAGCCCTCCTTTGGTTAGTGTACTTTGAACTTCGATGTTTGCTGTGT	5	+	161513110-161513159	5q34b	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, gamma 2 (GABRG2), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2538761] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [pmid 2538761] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9892355] [evidence IPI]; Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity [goid 8503] [pmid 2538761] [evidence TAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	ECA2; GEFSP3; CAE2	ECA2; GEFSP3; CAE2
Homo sapiens	RefSeq	XM_931022.1	ILMN_31694	LOC388080	XM_931022.1	XM_931022.1		388080	89037997	XM_931022.1	LOC388080	XP_936115.1	ILMN_1781762	0005720240	A	344	GAGCGCTCCAGGCCCAGCTGGTGGAGAAAGAAGAACTTGGATTCTTCCAG	15	-	20257397-20257430:20260503-20260518		PREDICTED: Homo sapiens similar to Golgi autoantigen, golgin subfamily A member 2 (Golgi matrix protein GM130), transcript variant 2 (LOC388080), mRNA.					
Homo sapiens	RefSeq	NM_172209.1	ILMN_26682	TAPBP	NM_172209.1	NM_172209.1		6892	27436896	NM_172209.1	TAPBP	NP_757346.1	ILMN_1782851	0007560039	A	1031	CTGTGTACAAACCCCCCAAAGTGTCCCTGATGCCAGCAACCCTTGCACGG	6	-	33380352-33380393:33380744-33380751	6p21.32a	Homo sapiens TAP binding protein (tapasin) (TAPBP), transcript variant 3, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 11884415] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9238042] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9271576] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11884415] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 11884415] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9238042] [evidence TAS]; A large, multisubunit complex which consists of the MHC class I-beta 2 microglobulin dimer, the transporter associated with antigen presentation (TAP), tapasin (an MHC-encoded membrane protein), the chaperone calreticulin and the thiol oxidoreductase ERp57. Functions in the assembly of peptides with newly synthesized MHC class I molecules [goid 42824] [pmid 12788224] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9271576] [evidence TAS]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11884415] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9271576] [evidence TAS]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded [goid 50823] [evidence ISS]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]	Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate [goid 15433] [pmid 9238042] [evidence TAS]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 12788224] [evidence TAS]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [pmid 12788224] [evidence TAS]; Interacting selectively with the TAP1 subunit of TAP (transporter associated with antigen processing) protein [goid 46978] [pmid 12788224] [evidence TAS]; Interacting selectively with the TAP2 subunit of TAP (transporter associated with antigen processing) protein [goid 46979] [pmid 12788224] [evidence TAS]; Interacting selectively with an unfolded protein [goid 51082] [pmid 12788224] [evidence TAS]	TAPA; NGS17; TPSN; TPN	TAPA; NGS17; TPSN; TPN
Homo sapiens	RefSeq	NM_001018111.1	ILMN_24120	PODXL	NM_001018111.1	NM_001018111.1		5420	66277201	NM_001018111.1	PODXL	NP_001018121.1	ILMN_2297511	0006270440	I	961	GACAGTGTTTCACCATGTCAGCCAGGCTGGTCTTGAACTCCTGACCTCGG	7	-	130845576-130845625	7q32.3b	Homo sapiens podocalyxin-like (PODXL), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9188463] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IEA]		MGC138240; PCLP; Gp200	MGC138240; Gp200; PCLP
Homo sapiens	RefSeq	NM_001018111.1	ILMN_24120	PODXL	NM_001018111.1	NM_001018111.1		5420	66277201	NM_001018111.1	PODXL	NP_001018121.1	ILMN_2413158	0001850092	A	5693	GTCACGGTCACTAGCTGATCCCTCAGGTCTGCTGCAAACACAGCATGGAG	7	-	130835794-130835843	7q32.3b	Homo sapiens podocalyxin-like (PODXL), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9188463] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IEA]		MGC138240; PCLP; Gp200	MGC138240; Gp200; PCLP
Homo sapiens	RefSeq	NM_181537.2	ILMN_18839	KRT27	NM_181537.3	NM_181537.3		342574	153945735	NM_181537.3	KRT27	NP_853515.2	ILMN_1680828	0003520524	S	1406	GAGGGTGTCTTCCTGAACTCCAGCCTCTGAGACAGAATGGCCCCCAAATT	17	-	38933216-38933250:38933251-38933265	17q21.2a	Homo sapiens keratin 27 (KRT27), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	KRT25C	KRT25C
Homo sapiens	RefSeq	NM_024819.3	ILMN_9107	DCAKD	NM_024819.3	NM_024819.3		79877	34147506	NM_024819.3	DCAKD	NP_079095.2	ILMN_1811648	0003890670	S	1932	GTGTCTTATTCATCTCTGTGTTCTTAGTGCAGAGCCTGGCCCGCTGTTGG	17	-	40456286-40456335	17q21.31d	Homo sapiens dephospho-CoA kinase domain containing (DCAKD), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ22955	FLJ22955
Homo sapiens	Unigene	Hs.539159	ILMN_104343	HS.539159	Hs.539159		Hs.539159		5513326	AI859710			ILMN_1901394	0000610100	S	57	GTGGGCTGTGCTGGGCATTATGAAGGACACAAAGATGGGGACTGGAACAG	12	+	119941353-119941402		wm19e03.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:2436412 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001715409.1	ILMN_338449	LOC100130370	XM_001715409.1	XM_001715409.1		100130370	169211190	XM_001715409.1	LOC100130370	XP_001715461.1	ILMN_3256970	0000450482	M	655	ATGTGTGACACCAGCAGGAGGCTGACGAGTTCCCTGGCAGGAAGCACACT	17	-	76967595-76967644	17q25.3f	PREDICTED: Homo sapiens similar to hCG1816473 (LOC100130370), mRNA.					
Homo sapiens	RefSeq	NM_016536.2	ILMN_138744	ZNF571	NM_016536.2	NM_016536.2		51276	40254876	NM_016536.2	ZNF571	NP_057620.2	ILMN_1706709	0004670661	S	3274	CAGCCTGCCAAGTAGCTGTCACCATAGCTGTTCATCACCATGCCTAGCTC	19	-	42745923-42745972	19q13.12c	Homo sapiens zinc finger protein 571 (ZNF571), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSPC059	HSPC059
Homo sapiens	RefSeq	NM_003418.4	ILMN_364139	CNBP	NM_003418.4	NM_003418.4		7555	187608720	NM_003418.4	CNBP	NP_003409.1	ILMN_3250984	0004760059	M	2477	GTGCTAGTGTTACAGGTGCGAGCCACCGTGTCTGGCCGATTCTGAACAGT	3	-	128887509-128887558	3q21.3c	Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 2562787] [evidence TAS]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [pmid 2562787] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2562787] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_152774.2	ILMN_2246	TMEM196	NM_152774.2	NM_152774.2		256130	61098057	NM_152774.2	TMEM196	NP_689987.2	ILMN_2125084	0004860008	S	3669	GTGACTACCTTATAGTTTTAGTATGAGCCTACCCTTGGAAGAAAGTAAGG	7	-	19725720-19725769	7p15.3e	Homo sapiens transmembrane protein 196 (TMEM196), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp686H19205; MGC42090; DKFZp686K0753	DKFZp686H19205; MGC42090; DKFZp686K0753
Homo sapiens	RefSeq	NM_198568.1	ILMN_18365	GJB7	NM_198568.1	NM_198568.1		375519	38348411	NM_198568.1	GJB7	NP_940970.1	ILMN_1801454	0002140039	S	1805	GGTATCCCACTTAAGCCTGAACCAGCAGACATCCGAAAGGGTCACTCTAG	6	-	88049841-88049890	6q15a	Homo sapiens gap junction protein, beta 7, 25kDa (GJB7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		connexin25; bA136M9.1; CX25; MGC71746	connexin25; bA136M9.1; CX25; MGC71746
Homo sapiens	RefSeq	XR_015349.1	ILMN_164590	LOC728657	XR_015349.1	XR_015349.1		728657	113421465	XR_015349.1	LOC728657		ILMN_3236476	0001850377	S	1642	AAGCTCTCTGAAAGCTGGACAGCCAGTCGGGGCCATTACGCGGCTGCCGG	10	+	46675510-46675545:46675634-46675647	10q11.22a	PREDICTED: Homo sapiens misc_RNA (LOC728657), miscRNA.					
Homo sapiens	RefSeq	NM_014245.2	ILMN_16344	RNF7	NM_183237.1	NM_183237.1		9616	34304332	NM_183237.1	RNF7	NP_899060.1	ILMN_1711862	0000460376	A	678	TAAAGGTGGTCCTTCCTACCTCTGTGGTGTGTGTCGCGCACACAGCTTAG	3	+	141464329-141464378	3q23c	Homo sapiens ring finger protein 7 (RNF7), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10082581] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10082581] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10082581] [evidence TAS];  [goid 6980] [pmid 10082581] [evidence TAS]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [pmid 10082581] [evidence TAS]	Interacting selectively with copper (Cu) ions [goid 5507] [pmid 10082581] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10082581] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SAG; ROC2; CKBBP1	SAG; ROC2; CKBBP1
Homo sapiens	RefSeq	XM_001718491.1	ILMN_345408	LOC100129633	XM_001718491.1	XM_001718491.1		100129633	169181279	XM_001718491.1	LOC100129633	XP_001718543.1	ILMN_3264989	0006040059	M	1157	AGCGCATTAACGCAGTCTCCCATTTGCCTTCGAGAACACCCCTGATCCAG	9	-	116470346-116470395	9q32e	PREDICTED: Homo sapiens similar to hCG1651427 (LOC100129633), mRNA.					
Homo sapiens	RefSeq	XR_038428.1	ILMN_345935	LOC728979	XR_038428.1	XR_038428.1		728979	169168192	XR_038428.1	LOC728979		ILMN_3303162	0002100019	M	190	TCTGTGTGTGTTCTGGCGGACCAGTAGCACTGCGACGAGGCCAAGGCCAT				5q14.3d	PREDICTED: Homo sapiens misc_RNA (LOC728979), miscRNA.					
Homo sapiens	RefSeq	XR_038428.1	ILMN_345935	LOC728979	XR_038428.1	XR_038428.1		728979	169168192	XR_038428.1	LOC728979		ILMN_3226561	0006380544	A	114	GAAGAAGTATGACCCACAGAAGGACAAGTGCTCCTCGGGCACCATCAGGC				5q14.3d	PREDICTED: Homo sapiens misc_RNA (LOC728979), miscRNA.					
Homo sapiens	RefSeq	NM_138295.2	ILMN_169848	PKD1L1	NM_138295.2	NM_138295.2		168507	33359209	NM_138295.2	PKD1L1	NP_612152.1	ILMN_2110422	0007560156	S	8524	GAGCCAGCAGACATCAAGGACTTCTGAGGAGCCTGGTACCTTGCATAGGC	7	-	47930261-47930310	7p12.3b	Homo sapiens polycystic kidney disease 1 like 1 (PKD1L1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11863367] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 11863367] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PRO19563	PRO19563
Homo sapiens	Unigene	Hs.546089	ILMN_109139	HS.546089	Hs.546089		Hs.546089		13731306	BG209619			ILMN_1883034	0001500332	S	700	GGGAGATTTCTGACTCTACTGACTCCTACAGGGGAAGACAATTTACTTGG					RST29145 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_006302.1	ILMN_175836	MOGS	NM_006302.2	NM_006302.2		7841	149999605	NM_006302.2	MOGS	NP_006293.2	ILMN_1727642	0004230309	S	2438	AACTACCTGGCTTTGGGAGCACTCCACCACTATGGGCATCTGGAGGGTCC	2	-	74688591-74688640	2p13.1b	Homo sapiens mannosyl-oligosaccharide glucosidase (MOGS), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	XM_934805.1	ILMN_40488	LOC645227	XM_946140.2	XM_946140.2		645227	113412101	XM_946140.2	LOC645227	XP_951233.1	ILMN_1674752	0001400039	S	161	CGGCATTGCGAATATCATACATTAGTAGGCCCCACAAAATCTGCATCTGT				1p31.3b	PREDICTED: Homo sapiens hypothetical LOC645227 (LOC645227), mRNA.					
Homo sapiens	RefSeq	XM_001714169.1	ILMN_341135	LOC100133237	XM_001714169.1	XM_001714169.1		100133237	169163314	XM_001714169.1	LOC100133237	XP_001714221.1	ILMN_3240617	0006900709	S	172	CATTGGACACCACTGCATCCATGTCCATCACACACCACAGCTGCCTTTTC	2	-	89948018-89948067	2p11.2b	PREDICTED: Homo sapiens hypothetical protein LOC100133237 (LOC100133237), mRNA.					
Homo sapiens	RefSeq	NM_017491.3	ILMN_14280	WDR1	NM_017491.3	NM_017491.3		9948	53729350	NM_017491.3	WDR1	NP_059830.1	ILMN_1675844	0004860239	I	759	CATACCGGCTGGCCACGGGAAGCGATGATAACTGCGCGGCATTCTTTGAG	4	-	10099367-10099416	4p16.1b	Homo sapiens WD repeat domain 1 (WDR1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10036186] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	NORI-1; AIP1	NORI-1; AIP1
Homo sapiens	RefSeq	NM_031418.2	ILMN_24810	ANO3	NM_031418.2	NM_031418.2		63982	156766083	NM_031418.2	ANO3	NP_113606.2	ILMN_3240765	0005820300	S	5801	GCTGCTGAGTGACTGCATGATGAGATACAACTTCTGAATGCTGCACATTC	11	+	26639296-26639345	11p14.2a	Homo sapiens anoctamin 3 (ANO3), mRNA.				C11orf25; GENX-3947	C11orf25; GENX-3947
Homo sapiens	RefSeq	NM_013937.2	ILMN_173266	OR11A1	NM_013937.2	NM_013937.2		26531	27754165	NM_013937.2	OR11A1	NP_039225.1	ILMN_2101339	0000240044	S	1675	GGATCATGGAGTTTGTAATCTGGTTTTCCACTGAACACTGTGTCACGAAC	6	-	29501764-29501813	6p22.1a	Homo sapiens olfactory receptor, family 11, subfamily A, member 1 (OR11A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	dJ994E9.6; hs6M1-18; OR11A2	dJ994E9.6; hs6M1-18; OR11A2
Homo sapiens	RefSeq	NM_052971.1	ILMN_7705	LEAP-2	NM_052971.1	NM_052971.1		116842	16418464	NM_052971.1	LEAP-2	NP_443203.1	ILMN_1752574	0006020603	S	1316	TAAAAGGAAGTAGGAACTGTCCCTGGCTTTCAGGCTCCAACATCCTCCCC	5	+	132237228-132237277	5q31.1c	Homo sapiens liver-expressed antimicrobial peptide 2 (LEAP-2), mRNA.					
Homo sapiens	RefSeq	NM_018699.2	ILMN_12765	PRDM5	NM_018699.2	NM_018699.2		11107	41349475	NM_018699.2	PRDM5	NP_061169.2	ILMN_1700985	0002070056	S	2014	GATTCGACACAAGATGACTCATAATCCCAATCGTCCCCTGGCAGAATGCC	4	-	121843928-121843977	4q27b	Homo sapiens PR domain containing 5 (PRDM5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PFM2	PFM2
Homo sapiens	RefSeq	NR_002961.1	ILMN_181621	SNORA22	NR_002961.1	NR_002961.1		677807	91680829	NR_002961.1	SNORA22		ILMN_3246713	0006330138	S	20	GTGTGCTTTATAGTTCCCTTGGCTTTGACCCTGTGCTAGAGCATTGCCTG	7	+	64857967-64858016	7q11.21d	Homo sapiens small nucleolar RNA, H/ACA box 22 (SNORA22), small nucleolar RNA.				ACA22	ACA22
Homo sapiens	RefSeq	NR_024077.2	ILMN_372053	WASH2P	NR_024077.2	NR_024077.2		375260	215277012	NR_024077.2	WASH2P		ILMN_3248844	0000770647	S	1125	CTGAGGTAGCCGAGCCTCTCAAGACCTACAAGATGGGGTACTAACACCAC	2	+	114354133-114354155:114354248-114354274	2q14.1a	Homo sapiens WAS protein family homolog 2 pseudogene (WASH2P), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Homo sapiens	RefSeq	NM_031220.1	ILMN_6414	PITPNM3	NM_031220.2	NM_031220.2		83394	141802227	NM_031220.2	PITPNM3	NP_112497.1	ILMN_1751635	0000290187	S	2807	GAGGCCAGCCACCGCTCACGCCCAAAGAAGAACAACTCGCGCATGATCCT	17	-	6299601-6299650	17p13.2a	Homo sapiens PITPNM family member 3 (PITPNM3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10022914] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [pmid 10022914] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10022914] [evidence TAS]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of phosphatidylinositol into, out of, within or between cells. Phosphatidylinositol refers to any glycophospholipids with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 8526] [pmid 10022914] [evidence TAS]; Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [pmid 10022914] [evidence TAS]	NIR1; MGC157740; MGC157741; RDGBA3	RDGBA3; NIR1; MGC157740; MGC157741
Homo sapiens	RefSeq	NM_000255.1	ILMN_2157	MUT	NM_000255.1	NM_000255.1		4594	4557766	NM_000255.1	MUT	NP_000246.1	ILMN_1785113	0005890703	S	2146	CTCCCTTGGACGGCCAGATATTCTTGTCATGTGTGGAGGGGTGATACCAC	6	-	49511132-49511181	6p12.3b	Homo sapiens methylmalonyl Coenzyme A mutase (MUT), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 2567699] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]	Catalysis of the reaction: (R)-2-methyl-3-oxopropanoyl-CoA = succinyl-CoA [goid 4494] [pmid 2567699] [evidence TAS]; Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]	MCM	MCM
Homo sapiens	RefSeq	NM_000255.1	ILMN_2157	MUT	NM_000255.1	NM_000255.1		4594	4557766	NM_000255.1	MUT	NP_000246.1	ILMN_2078074	0007320020	S	2683	ACTCTGACTATTCCCATTTCTCAGTTTAGCATTACATTGTCTTGAGCACC	6	-	49506996-49507045	6p12.3b	Homo sapiens methylmalonyl Coenzyme A mutase (MUT), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 2567699] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]	Catalysis of the reaction: (R)-2-methyl-3-oxopropanoyl-CoA = succinyl-CoA [goid 4494] [pmid 2567699] [evidence TAS]; Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]	MCM	MCM
Homo sapiens	RefSeq	XM_001716961.1	ILMN_347387	LOC100129200	XM_001716961.1	XM_001716961.1		100129200	169160630	XM_001716961.1	LOC100129200	XP_001717013.1	ILMN_3267304	0001690754	M	493	TCCCCAACACTTACCCTTCATCTAGTCCTGAAAGGTCCCCTGAGTGCAGG				1p35.1b	PREDICTED: Homo sapiens hypothetical protein LOC100129200 (LOC100129200), mRNA.					
Homo sapiens	RefSeq	XM_926054.1	ILMN_39372	LOC642568	XM_926054.1	XM_926054.1		642568	89033962	XM_926054.1	LOC642568	XP_931147.1	ILMN_1657914	0005860687	S	121	CTGGTACCTGTTTCAAGTGCGGCAATGAAGGCCACTGGTCCACACAATAC	11	+	55107564-55107613		PREDICTED: Homo sapiens hypothetical protein LOC642568 (LOC642568), mRNA.					
Homo sapiens	RefSeq	NM_001012969.1	ILMN_26104	ADAL	NM_001012969.1	NM_001012969.1		161823	61175223	NM_001012969.1	ADAL	NP_001012987.1	ILMN_1725043	0005910554	S	1156	CTGGTGGACTTTGTGAGGCAACATCGGATACCACTGGGTAAGGCTTGGAG	15	+	41428499-41428548	15q15.3a	Homo sapiens adenosine deaminase-like (ADAL), mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]	FLJ44620; DKFZp313B2137	FLJ44620; DKFZp313B2137
Homo sapiens	RefSeq	NM_002966.1	ILMN_15502	S100A10	NM_002966.1	NM_002966.1		6281	4506760	NM_002966.1	S100A10	NP_002957.1	ILMN_1796712	0002490195	S	405	GGCAGAAATGAGCAGTTCGCTCCTCCCTGATAAGAGTTGTCCAAAGGGTC	1	-	150222202-150222251	1q21.3a	Homo sapiens S100 calcium binding protein A10 (annexin II ligand, calpactin I, light polypeptide (p11)) (S100A10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1831433] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 1831433] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ANX2L; MGC111133; ANX2LG; GP11; p10; P11; Ca[1]; CAL1L; 42C; CLP11	ANX2L; MGC111133; ANX2LG; GP11; p10; P11; Ca[1]; CAL1L; 42C; CLP11
Homo sapiens	RefSeq	NM_145805.1	ILMN_22222	ISL2	NM_145805.1	NM_145805.1		64843	21956640	NM_145805.1	ISL2	NP_665804.1	ILMN_1731086	0000610670	S	1551	CCGGGCTCCTAGCGGGGAAAAGGAAGGGGATAACTCAGAGGAACAGACAC	15	+	74421624-74421673	15q24.3a	Homo sapiens ISL LIM homeobox 2 (ISL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ10160	FLJ10160
Homo sapiens	RefSeq	NM_025187.3	ILMN_20432	C16ORF70	NM_025187.3	NM_025187.3		80262	34147691	NM_025187.3	C16orf70	NP_079463.2	ILMN_1711703	0004670520	S	2060	TTGGAGTCAGCTTTCAAGATTGCCTGTGCCCCTGCTCTGCCCCATCCTGG	16	+	65739162-65739211	16q22.1a	Homo sapiens chromosome 16 open reading frame 70 (C16orf70), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	lin-10; C16orf6; FLJ12076; LIN10	lin-10; C16orf6; FLJ12076; LIN10
Homo sapiens	RefSeq	XM_495860.2	ILMN_170468	MUC5AC	XM_001134429.1	XM_001134429.1		4586	113422229	XM_001134429.1	MUC5AC	XP_001134429.1	ILMN_1748303	0001300240	S	3619	ATGCATCCAGCCTGCTGTTCTGGGGACGTGAGCATCACCTGAGGGTCTCA	11	+	1178751-1178800	11p15.5c	PREDICTED: Homo sapiens mucin 5AC, oligomeric mucus/gel-forming (MUC5AC), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 7657101] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Extracellular matrix material consisting of polysaccharides and protein [goid 43205] [pmid 14749330] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence NAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence NAS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [pmid 10611155] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Functions as a lubricant for an extracellular matrix, such as a mucous membrane [goid 30197] [pmid 7657101] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions as a lubricant for an extracellular matrix, such as a mucous membrane [goid 30197] [evidence NAS]		
Homo sapiens	Unigene	Hs.128463	ILMN_76644	HS.128463	Hs.128463		Hs.128463		27831867	BX102609			ILMN_1877912	0006980224	S	490	TCCCACCAGCTCTTCCAGAGTGAGTTCTGCCCATTCTGTAGAAGAAACAG	6	+	146099966-146100015		BX102609 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGp998K053948, mRNA sequence					
Homo sapiens	RefSeq	NM_184237.1	ILMN_20445	RNPC2	NM_184237.1	NM_184237.1		9584	35493816	NM_184237.1	RNPC2	NP_909125.1	ILMN_1684549	0004890039	I	455	CTGCCTCCTTGGAAAGCTCTACATCTCCTTGTGATTGGAGTGTGGGTTTC	20	-	33785534-33785583	20q11.22b	Homo sapiens RNA-binding region (RNP1, RRM) containing 2 (RNPC2), transcript variant 3, mRNA.				DKFZp781C0423; CC1.4; CC1.3; CAPER; HCC1; RBM39	DKFZp781C0423; CC1.4; CC1.3; CAPER; HCC1; RBM39
Homo sapiens	RefSeq	XR_037389.1	ILMN_344667	LOC390834	XR_037389.1	XR_037389.1		390834	169212926	XR_037389.1	LOC390834		ILMN_3286875	0004920603	M	2787	GGAAGAAGTTGAGGATGGTCTGCCTTCCCTTGTCCTTTTACATGGCCAGG				18p11.21b	PREDICTED: Homo sapiens misc_RNA (LOC390834), miscRNA.					
Homo sapiens	RefSeq	XM_942402.1	ILMN_137993	AHCTF1	XM_942402.1	XM_942402.1		25909	89064258	XM_942402.1	AHCTF1	XP_947495.1	ILMN_1666679	0006220427	I	516	CAGTTTTTCATCTCAGTCACTCTTCAGCTTAAAATTTGGTTATTTGTCCT				1q44d	PREDICTED: Homo sapiens AT hook containing transcription factor 1 (AHCTF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	NM_001004730.1	ILMN_19221	OR5AR1	NM_001004730.1	NM_001004730.1		219493	52317103	NM_001004730.1	OR5AR1	NP_001004730.1	ILMN_1758663	0006960132	S	417	GGTCTGCTTGGCTCTCATGCTGGGCTCTTACCTGGCTGGTCTAGTGAGTT	11	+	56188154-56188203	11q11c	Homo sapiens olfactory receptor, family 5, subfamily AR, member 1 (OR5AR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-209	OR11-209
Homo sapiens	RefSeq	NM_058164.1	ILMN_14024	OLFM2	NM_058164.1	NM_058164.1		93145	17157992	NM_058164.1	OLFM2	NP_477512.1	ILMN_2110271	0000580475	S	1343	GTGCTCTACAATGTCACCCTGTTTCACGTCATCAGCACCTCTGGGGACCC	19	-	9825862-9825911	19p13.2c	Homo sapiens olfactomedin 2 (OLFM2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			NOELIN2; NOE2; OlfC; NOELIN2_V1	NOELIN2; NOE2; OlfC; NOELIN2_V1
Homo sapiens	RefSeq	NM_213568.1	ILMN_183031	SLC39A3	NM_213568.1	NM_213568.1		29985	47080102	NM_213568.1	SLC39A3	NP_998733.1	ILMN_1746986	0005670136	I	2695	CAGCCGGTGGTCAGTGAGGGAGTTAAGTGGCTTCTCCGTGGAAACACAGC	19	-	2734765-2734814	19p13.3g	Homo sapiens solute carrier family 39 (zinc transporter), member 3 (SLC39A3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	ZIP3	ZIP3
Homo sapiens	Unigene	Hs.146882	ILMN_78402	HS.146882	Hs.146882		Hs.146882		5678208	AI939338			ILMN_1885705	0005090685	S	336	GGACCCAACAACTGGTATAGGCACACCTCAGATCCAGACGCAGACAGAGG	4	-	22127910-22127959		qb54e12.x5 NCI_CGAP_Brn23 Homo sapiens cDNA clone IMAGE:1703950 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016946.3	ILMN_29770	F11R	NM_016946.3	NM_016946.3		50848	21464105	NM_016946.3	F11R	NP_058642.1	ILMN_2406532	0000050307	A	3319	GTGATGGGATTACAGATGTGAGCCACCGTGCCTAGCCAAGGATGAGATTT	1	-	159232886-159232935	1q23.3a	Homo sapiens F11 receptor (F11R), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10395639] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	JAM; JAM-A; PAM-1; JAM1; JAM-1; JAMA; JCAM; KAT; CD321	JAM; JAM-A; PAM-1; JAM1; JAM-1; JAMA; JCAM; KAT; CD321
Homo sapiens	RefSeq	NM_001636.2	ILMN_25686	SLC25A6	NM_001636.2	NM_001636.2		293	156071461	NM_001636.2	SLC25A6	NP_001627.2	ILMN_3240838	0004490722	S	1110	CGCATCCTGCCTGTAGATGGCCGGGGAAGGCTCTAGAAAAGGGGCGCATT	XY	-	1468362-1468411	Xp22.33d,Yp11.32a	Homo sapiens solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 (SLC25A6), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [pmid 2541251] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out) [goid 5471] [pmid 2541251] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14726512] [evidence IPI]	ANT3Y; MGC17525; ANT3	ANT3Y; MGC17525; ANT3
Homo sapiens	RefSeq	XM_929916.1	ILMN_31994	LOC646951	XM_929916.1	XM_929916.1		646951	88965875	XM_929916.1	LOC646951	XP_935009.1	ILMN_1713896	0002260243	S	108	TCACAGGTTGGGAACCAATAATTCAACTCCTCAGAATCATGAAGGCAACC	3	-	152103877-152103893:152105539-152105566:152105804-152105808	3q25.1b	PREDICTED: Homo sapiens similar to hCG1786685 (LOC646951), mRNA.					
Homo sapiens	RefSeq	XM_937418.1	ILMN_173095	EPHA6	NM_001080448.2	NM_001080448.2		285220	145312250	NM_001080448.2	EPHA6	NP_001073917.2	ILMN_1719531	0002690097	A	1443	GCTTAGACACCAGCCAGTGTGAGGACTGTGGTGGAGGACTCCGCTTCATC	3	+	96962925-96962974	3q11.2c	Homo sapiens EPH receptor A6 (EPHA6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRO57066; FLJ35246; DKFZp434C1418; EPA6	
Homo sapiens	RefSeq	XM_936717.1	ILMN_173095	EPHA6	NM_001080448.2	NM_001080448.2		285220	145312250	NM_001080448.2	EPHA6	NP_001073917.2	ILMN_1654979	0005360431	I	3069	AGGAGAGAAATCACAGACCAAAATTTACTGACATTGTCAGCTTCCTTGAC	3	+	97454860-97454909	3q11.2c	Homo sapiens EPH receptor A6 (EPHA6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRO57066; FLJ35246; DKFZp434C1418; EPA6	
Homo sapiens	RefSeq	NM_000444.2	ILMN_178214	PHEX	NM_000444.3	NM_000444.3		5251	90403591	NM_000444.3	PHEX	NP_000435.3	ILMN_1668242	0002350612	S	2429	CATGGACTCCTGCCGACTCTGGTAGCTGGGACGCTGGTTTATGGCATCCT	X	+	22175967-22175991:22175992-22176016	Xp22.11b	Homo sapiens phosphate regulating endopeptidase homolog, X-linked (hypophosphatemia, vitamin D resistant rickets) (PHEX), transcript variant 1843529, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9593714] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9593714] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9070861] [evidence TAS]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 7550339] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9593714] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7550339] [evidence TAS]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 9593714] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9070861] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HPDR; HYP; HPDR1; XLH; HYP1; PEX	HPDR; HYP; HPDR1; HYP1; XLH; PEX
Homo sapiens	RefSeq	NM_019005.2	ILMN_12567	MIOS	NM_019005.3	NM_019005.3		54468	109150418	NM_019005.3	MIOS	NP_061878.3	ILMN_1680644	0002750544	S	2795	TTGCAGGCACGGTGGACATGCTGGACATATGCTTAGTTGGTTCAGGGACC	7	+	7606701-7606703:7607238-7607284	7p21.3e	Homo sapiens missing oocyte, meiosis regulator, homolog (Drosophila) (MIOS), mRNA.					
Homo sapiens	Unigene	Hs.435263	ILMN_91420	HS.435263	Hs.435263		Hs.435263		27786520	CB048233			ILMN_1870668	0004900048	S	157	GGCAGTGGGCGTTCAGAGCACATATACTCCACTATGCTAAACCACCTCTC	13	-	99523631-99523680		NISC_gj03f04.y1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:3270678 5, mRNA sequence					
Homo sapiens	RefSeq	NM_080821.1	ILMN_25852	C20ORF108	NM_080821.2	NM_080821.2		116151	93277093	NM_080821.2	C20orf108	NP_543011.2	ILMN_1708016	0000770561	S	2754	GGGCTTAAATCTCAAACTTTGTTAGGAGTAACAGGAGCGTGCTGAGCGGG	20	+	54376846-54376895	20q13.2d	Homo sapiens chromosome 20 open reading frame 108 (C20orf108), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP434A1114; dJ1167H4.1; 5A3	DKFZP434A1114; dJ1167H4.1; 5A3
Homo sapiens	RefSeq	XM_933190.1	ILMN_36863	LOC644019	XM_933190.1	XM_933190.1		644019	89029522	XM_933190.1	LOC644019	XP_938283.1	ILMN_1687043	0003140484	I	281	GTGGAGGGAAGGAGAAGGGAAAAGTGGTGATTCAGAGAGCCAAATGGGGC	9	-	68539627-68539676	9q12i	PREDICTED: Homo sapiens similar to COBW domain containing 3, transcript variant 23 (LOC644019), mRNA.					
Homo sapiens	RefSeq	NM_133505.2	ILMN_29913	DCN	NM_133505.2	NM_133505.2		1634	47419923	NM_133505.2	DCN	NP_598012.1	ILMN_2347145	0007650296	A	577	CAGCCATCCACCTTCAGATGTGTCTACGTGCGCTCTGCCATTCAACTCGG	12	-	91539847-91539896	12q21.33c	Homo sapiens decorin (DCN), transcript variant C, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 7961765] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PGII; DSPG2; CSCD; PGS2; SLRR1B; PG40	PGII; DSPG2; CSCD; PGS2; SLRR1B; PG40
Homo sapiens	RefSeq	NM_177543.1	ILMN_5910	PPAP2C	NM_177543.1	NM_177543.1		8612	29171746	NM_177543.1	PPAP2C	NP_808211.1	ILMN_1675523	0006620725	I	69	AGGCTCGGGGGTCCCCGCGTCCCAGGCCCAGGGGGATGGGGGTCGCGAGA	19	-	291051-291066:291067-291100	19p13.3j	Homo sapiens phosphatidic acid phosphatase type 2C (PPAP2C), transcript variant 3, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9705349] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9607309] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [pmid 9607309] [evidence TAS]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [pmid 9705349] [evidence EXP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	PAP-2c; PAP2-g; LPP2	PAP-2c; PAP2-g; LPP2
Homo sapiens	RefSeq	NM_001257.3	ILMN_26240	CDH13	NM_001257.3	NM_001257.3		1012	61676095	NM_001257.3	CDH13	NP_001248.1	ILMN_1766925	0005820563	S	3508	AGTGACAGCTTGTGGCTTTTTATTAGAGCTCGCCACGAACTAGGGTAAGG	16	+	82387382-82387431	16q23.3a-q23.3b	Homo sapiens cadherin 13, H-cadherin (heart) (CDH13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16873731] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10737605] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 9650591] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [pmid 10737605] [evidence IDA]	Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 15364621] [evidence IMP]; Any process that activates or increases the rate or extent of cell adhesion to an extracellular matrix [goid 1954] [pmid 17573778] [evidence IMP]; The extension of new blood vessels from existing capillaries into avascular tissues resulting from the proliferation of blood vessel endothelial cells [goid 2040] [pmid 16873731] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 14729458] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 15703273] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10737605] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 10601632] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [pmid 15703273] [evidence IMP]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [pmid 15703273] [evidence IDA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [pmid 17573778] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 14729458] [evidence IDA]; Any process that modulates the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity [goid 42058] [pmid 17573778] [evidence IMP]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [pmid 14729458] [evidence IDA]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [pmid 15816843] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [pmid 16099944] [evidence IMP]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [pmid 15364621] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [pmid 16013438] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50927] [pmid 16013438] [evidence IDA]; Any process by which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane [goid 51668] [pmid 17573778] [evidence IMP]; A series of molecular signals mediated by the detection of low density lipoprotein [goid 55096] [pmid 16013438] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [pmid 16013438] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [pmid 10601632] [evidence IDA]; Interacting selectively with adiponectin, a protein hormone produced by adipose tissue that modulates a number of metabolic processes, including glucose regulation and fatty acid catabolism [goid 55100] [evidence IEA]	CDHH	CDHH
Homo sapiens	RefSeq	XM_001725642.1	ILMN_339786	LOC100128619	XM_001725642.1	XM_001725642.1		100128619	169168093	XM_001725642.1	LOC100128619	XP_001725694.1	ILMN_3182189	0002190202	A	591	GGCAGGTCGGTAGAGTACCTCCTATCACTCCAACACATGATCTAAGGGAT				5q35.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128619 (LOC100128619), mRNA.					
Homo sapiens	RefSeq	XM_372521.1	ILMN_1064	LOC390466	XM_372521.1	XM_372521.1		390466	41203895	XM_372521.1	LOC390466	XP_372521.1	ILMN_1665781	0003710471	S	61	AACCACCGCTGCCGCCTCCTTCTTCTGTCACTCCTGGTGCTGCACTGTGT	14	+	34459695-34459744		PREDICTED: Homo sapiens similar to SMT3 suppressor of mif two 3 homolog 2 (LOC390466), mRNA.					
Homo sapiens	Unigene	Hs.130260	ILMN_76938	HS.130260	Hs.130260		Hs.130260		3872129	AI263926			ILMN_1888658	0000060739	S	192	CAACTCGAGAAGTCATCCTGTGTGGGGAGAGTGGGTATCACATGAAACTC	Y	-	2674130-2674179		qk02b10.x1 NCI_CGAP_Kid3 Homo sapiens cDNA clone IMAGE:1867771 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001001438.1	ILMN_12246	LSS	NM_001001438.1	NM_001001438.1		4047	47933396	NM_001001438.1	LSS	NP_001001438.1	ILMN_1687863	0004780176	I	2293	GCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTC	21	-	46433090-46433139	21q22.3f	Homo sapiens lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) (LSS), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: (S)-2,3-epoxysqualene = lanosterol. This is a cyclization reaction that forms the sterol nucleus [goid 250] [pmid 7639730] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	OSC	OSC
Homo sapiens	RefSeq	NM_207465.1	ILMN_16305	FLJ45337	NM_207465.1	NM_207465.1		400754	46409549	NM_207465.1	FLJ45337	NP_997348.1	ILMN_1680388	0006840066	S	3832	GCTTTCAGGACTTGGATTGGCTCTCCTTGCTCCTCAGCTTACAGATGGCC	1	+	55973032-55973081	1p32.3a	Homo sapiens FLJ45337 protein (FLJ45337), mRNA.					
Homo sapiens	RefSeq	XM_372019.4	ILMN_167765	FAM90A6P	XR_016591.1	XR_016591.1		389618	113419912	XR_016591.1	FAM90A6P		ILMN_1697056	0005260603	S	1622	ACGCGCCAGGAAAAGCTTCCGCCAGAGATTCGTTGCCTCAGAAACTGCGT	8	-	7393707-7393756	8p23.1e	PREDICTED: Homo sapiens family with sequence similarity 90, member A6 pseudogene (FAM90A6P), mRNA.					
Homo sapiens	RefSeq	XM_496948.2	ILMN_167765	FAM90A6P	XR_016591.1	XR_016591.1		389618	113419912	XR_016591.1	FAM90A6P		ILMN_1778220	0001440521	S	371	AACCTCCAGAGAAGCCGCTGCCGAATGGAAAAGGATCCACGGAATCTTCC	8	-	7395623-7395672	8p23.1e	PREDICTED: Homo sapiens family with sequence similarity 90, member A6 pseudogene (FAM90A6P), mRNA.					
Homo sapiens	RefSeq	XM_928517.1	ILMN_167765	FAM90A6P	XR_016591.1	XR_016591.1		389618	113419912	XR_016591.1	FAM90A6P		ILMN_1725834	0001030735	S	1138	ATCACCCAGCGGCCGGCCATGATGGGGCCCAGCCTCTCAGAGTGCTCTTC	8	-	7394191-7394240	8p23.1e	PREDICTED: Homo sapiens family with sequence similarity 90, member A6 pseudogene (FAM90A6P), mRNA.					
Homo sapiens	RefSeq	XM_928561.1	ILMN_167765	FAM90A6P	XR_016591.1	XR_016591.1		389618	113419912	XR_016591.1	FAM90A6P		ILMN_1699455	0003990681	S	45	GAGAGCCCAGACCCTCCAGAAGCAGCGGAGGGCCCCAGTTGGGCCAAGGT	8	-	7396900-7396949	8p23.1e	PREDICTED: Homo sapiens family with sequence similarity 90, member A6 pseudogene (FAM90A6P), mRNA.					
Homo sapiens	RefSeq	NM_015033.2	ILMN_16114	FNBP1	NM_015033.2	NM_015033.2		23048	68348705	NM_015033.2	FNBP1	NP_055848.1	ILMN_1797342	0005270435	S	5262	TGGAGGCATTTTGCTGTGTGAGGCCGATCGCCACTGTAAAGGTCCTAGAG	9	-	132649579-132649628	9q34.11d	Homo sapiens formin binding protein 1 (FNBP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15252009] [evidence IPI]	FBP17; MGC126804; KIAA0554	FBP17; MGC126804; KIAA0554
Homo sapiens	RefSeq	XM_929970.1	ILMN_39819	TREML3	XM_929970.1	XM_929970.1		340206	88992692	XM_929970.1	TREML3	XP_935063.1	ILMN_1802904	0004560438	I	45	TCGGCACATCAGAACAGTGGCTGGCACTGCCAGGTCTGCCAAGTCAAAGT	6	-	41296734-41296735:41298268-41298315	6p21.1g	PREDICTED: Homo sapiens triggering receptor expressed on myeloid cells-like 3 (TREML3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NR_030586.1	ILMN_388061	MIR509-2	NR_030586.1	NR_030586.1		100126301	262205998	NR_030586.1	MIR509-2		ILMN_3309724	0001710360	S	3	GCTGTGTGTGGTACCCTACTGCAGACAGTGGCAATCATGTATAATTAAAA				Xq27.3e	Homo sapiens microRNA 509-2 (MIR509-2), microRNA.					
Homo sapiens	RefSeq	NM_001987.3	ILMN_175744	ETV6	NM_001987.4	NM_001987.4		2120	153267458	NM_001987.4	ETV6	NP_001978.1	ILMN_1789596	0000240064	S	5746	CCGCAACCACCTGCAAACCAGAACGACTCTAGAATTTCCTTCCCCGCCCC	12	+	11938923-11938972	12p13.2b-p13.2a	Homo sapiens ets variant 6 (ETV6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7761424] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12590135] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	TEL; TEL/ABL	TEL
Homo sapiens	RefSeq	NR_002805.2	ILMN_15869	LOC285453	NR_002805.2	NR_002805.2		285453	110681691	NR_002805.2	LOC285453		ILMN_2102752	0001410500	S	618	CAGATGACTTCACCACAGAAACTTTAGAATGGGGGCTCAGTTGTTCTGAC	4	-	57321859-57321908	4q12e	Homo sapiens TXNDC9 pseudogene (LOC285453) on chromosome 4.					
Homo sapiens	RefSeq	XR_000550.1	ILMN_15869	LOC285453	NR_002805.2	NR_002805.2		285453	110681691	NR_002805.2	LOC285453		ILMN_1779796	0002370367	A	989	TGGCAATCCAGTGTTGACTGTTCCCTAATTTAAGCCAGATTACTCAAATG	4	-	57321488-57321537	4q12e	Homo sapiens TXNDC9 pseudogene (LOC285453) on chromosome 4.					
Homo sapiens	RefSeq	NM_153191.1	ILMN_8218	SLC22A2	NM_153191.1	NM_153191.1		6582	23510414	NM_153191.1	SLC22A2	NP_694861.1	ILMN_1715972	0002510484	I	2514	CCCATTCTGGGATGGGGAATTTGTCCTTACAGTCCCACTCTGGAGCACTG	6	-	160583479-160583528	6q25.3f	Homo sapiens solute carrier family 22 (organic cation transporter), member 2 (SLC22A2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9260930] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9260930] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulated release of a fluid by a cell or group of cells in a multicellular organism [goid 7589] [pmid 9260930] [evidence TAS]; The directed movement of organic cations into, out of, within or between cells. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage [goid 15695] [pmid 16024787] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [pmid 16024787] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence IEA]	OCT2; MGC32628	OCT2; MGC32628
Homo sapiens	RefSeq	XM_938724.1	ILMN_168738	MBOAT2	XM_001129292.1	XM_001129292.1		129642	113413681	XM_001129292.1	MBOAT2	XP_001129292.1	ILMN_1777853	0005080468	A	3751	TGGCCACAGGAGCTGAAAGCAGAAGAGTGGGATTTGATGCCAGGCAGTGG				2p25.1e	PREDICTED: Homo sapiens membrane bound O-acyltransferase domain containing 2 (MBOAT2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_024993.3	ILMN_13108	LRRTM4	NM_024993.3	NM_024993.3		80059	40255211	NM_024993.3	LRRTM4	NP_079269.3	ILMN_1685472	0003060131	S	2932	AGGAGAGAGGTTTGAGTTCTGGGTATCCTCCCTTTCTGTAACAGCCTCAA	2	-	77597936-77597985	2p12g	Homo sapiens leucine rich repeat transmembrane neuronal 4 (LRRTM4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC120633; FLJ12568; MGC120636	MGC120633; FLJ12568; MGC120636
Homo sapiens	RefSeq	NM_080549.2	ILMN_25213	PTPN6	NM_080548.3	NM_080548.3		5777	94557302	NM_080548.3	PTPN6	NP_536858.1	ILMN_1738675	0006400465	A	1910	GGAGAAGAGCAAGGGTTCCCTCAAGAGGAAGTGAGCGGTGCTGTCCTCAG	12	+	6940311-6940344:6940345-6940360	12p13.31d	Homo sapiens protein tyrosine phosphatase, non-receptor type 6 (PTPN6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9774457] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10506221] [evidence TAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1732748] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10506221] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10506221] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7781604] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 1732748] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10660620] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	SH-PTP1; PTP-1C; HCPH; SHP1; SHP-1; SHP-1L; HCP; HPTP1C	SHP-1L; HCP; SH-PTP1; PTP-1C; HCPH; SHP1; SHP-1; HPTP1C
Homo sapiens	RefSeq	NM_080548.2	ILMN_25213	PTPN6	NM_080548.3	NM_080548.3		5777	94557302	NM_080548.3	PTPN6	NP_536858.1	ILMN_1664122	0002260482	I	32	TGGCTGATTACTGAGCGGTTCTTCCTCACCTGGCTTGGGCCACTGTGCAC	12	+	6926032-6926081	12p13.31d	Homo sapiens protein tyrosine phosphatase, non-receptor type 6 (PTPN6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9774457] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10506221] [evidence TAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1732748] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10506221] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10506221] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7781604] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 1732748] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10660620] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	SH-PTP1; PTP-1C; HCPH; SHP1; SHP-1; SHP-1L; HCP; HPTP1C	SHP-1L; HCP; SH-PTP1; PTP-1C; HCPH; SHP1; SHP-1; HPTP1C
Homo sapiens	RefSeq	NM_012193.2	ILMN_13859	FZD4	NM_012193.2	NM_012193.2		8322	22547160	NM_012193.2	FZD4	NP_036325.2	ILMN_1743367	0000620255	S	7075	TCTGTGCAGCAGTCGGGCTGGATGCTCTGTGGCCTTTCTTGGGTCCTCAT	11	-	86656979-86657028	11q14.2a	Homo sapiens frizzled homolog 4 (Drosophila) (FZD4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10544037] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4926] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [pmid 10544037] [evidence TAS]	FzE4; EVR1; GPCR; FZD4S; CD344; MGC34390; Fz-4; FEVR	FzE4; EVR1; GPCR; FZD4S; CD344; MGC34390; Fz-4; FEVR
Homo sapiens	RefSeq	NM_000139.2	ILMN_18276	MS4A2	NM_000139.2	NM_000139.2		2206	23397640	NM_000139.2	MS4A2	NP_000130.1	ILMN_1806721	0002360470	S	3378	GCCCACCTCAGGCAGACACAGAGCACAATGCTGGGGTTCTCTTCACACTA	11	+	59622246-59622295	11q12.1d	Homo sapiens membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide) (MS4A2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2448768] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex composed of an Fc-epsilon RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without an Fc-episilon RI beta chain and additional signaling components. The complex functions primarily as an activating receptor for IgE [goid 32998] [evidence IEA]	An immune response mediated through a body fluid [goid 6959] [pmid 2448768] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9169438] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2448768] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [pmid 9169438] [evidence TAS]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IEA]	IGHER; ATOPY; FCERI; IGEL; MS4A1; FCER1B; IGER; APY	IGHER; ATOPY; FCERI; IGEL; MS4A1; FCER1B; IGER; APY
Homo sapiens	RefSeq	XM_499385.2	ILMN_35149	LOC650254	XM_499385.2	XM_499385.2		650254	89026523	XM_499385.2	LOC650254	XP_499385.2	ILMN_1763529	0007000719	I	775	GACCTCAAGGAAGTCAGGGAATGAGCCATGTGTGCATCTGTGGGAGGAGG					PREDICTED: Homo sapiens similar to hypothetical protein FLJ40722, transcript variant 1 (LOC650254), mRNA.					
Homo sapiens	RefSeq	XM_001128586.2	ILMN_180449	LOC728649	XM_001128586.2	XM_001128586.2		728649	169177383	XM_001128586.2	LOC728649	XP_001128586.1	ILMN_3249707	0004610315	S	1734	ACCGCTATTACCAGGCGGAATCCCATCCAAGTACTAACCAGTCCCGACCC	9	+	66197974-66198023	9q12g	PREDICTED: Homo sapiens hypothetical LOC728649 (LOC728649), mRNA.					
Homo sapiens	RefSeq	XM_941434.1	ILMN_44827	LOC652102	XM_941434.1	XM_941434.1		652102	89037907	XM_941434.1	LOC652102	XP_946527.1	ILMN_1743797	0000060674	S	742	TGGACCTGGAGGGTCTTCTGCTTGCTGGCTGTAGCTCCAGGTGCTCACTC					PREDICTED: Homo sapiens similar to Ig heavy chain V-I region HG3 precursor (LOC652102), mRNA.					
Homo sapiens	RefSeq	NM_024498.1	ILMN_11565	ZNF117	NM_024498.1	NM_024498.1		7670	13374556	NM_024498.1	ZNF117	NP_078774.1	ILMN_1720184	0002510743	S	923	GGAGAGAAGCTGTACAAATGTGAAGAATGTGACAAGGCCTTTAACCTGTC	7	-	64077300-64077349	7q11.21c	Homo sapiens zinc finger protein 117 (ZNF117), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2023909] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2505992] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HPF9	HPF9
Homo sapiens	RefSeq	NM_001001323.1	ILMN_16001	ATP2B1	NM_001682.2	NM_001682.2		490	48255944	NM_001682.2	ATP2B1	NP_001673.2	ILMN_1813399	0006510164	A	5941	GACCCTATCAACTGGAGAGCCCACAAGGCATAGGGAATAGAGAAAAGGGA	12	-	89982614-89982663	12q21.33b	Homo sapiens ATPase, Ca++ transporting, plasma membrane 1 (ATP2B1), transcript variant 2, mRNA.				PMCA1; PMCA1kb	PMCA1; PMCA1kb
Homo sapiens	Unigene	Hs.566876	ILMN_119120	HS.566876	Hs.566876		Hs.566876		11594332	BF511034			ILMN_1859614	0003190392	S	143	GCACCCAGCATCTTTATGCCCCAGGCACCAACGCTGTCAGGGGAACCTGA	8	+	67295063-67295112		UI-H-BI4-apl-f-01-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3087865 3, mRNA sequence					
Homo sapiens	RefSeq	NM_173495.1	ILMN_162218	PTCHD1	NM_173495.2	NM_173495.2		139411	148271103	NM_173495.2	PTCHD1	NP_775766.2	ILMN_1717393	0006860176	S	2431	GTCTGATTCCTCTTGCAGCTGTGCCTTCAAATCTGACCTGTACACTGTTC	X	+	23321979-23322028	Xp22.11b	Homo sapiens patched domain containing 1 (PTCHD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]	MGC149798; FLJ30296	FLJ30296
Homo sapiens	RefSeq	XM_937023.1	ILMN_138172	MAML1	XM_937023.1	XM_937023.1		9794	88990089	XM_937023.1	MAML1	XP_942116.1	ILMN_1780748	0001570592	I	1767	CAGCTTTGCTGCCACTACAGAGCCTGTTATAAGCCAGAACGTGAAGAGGG				5q35.3e	PREDICTED: Homo sapiens mastermind-like 1 (Drosophila) (MAML1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11101851] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [pmid 11101851] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 11101851] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 11101851] [evidence IDA]		
Homo sapiens	RefSeq	XM_001715464.1	ILMN_337554	LOC100132833	XM_001715464.1	XM_001715464.1		100132833	169163580	XM_001715464.1	LOC100132833	XP_001715516.1	ILMN_3202231	0004480601	A	496	TTTACCTGTTTTGAGAGTAAGACCAAGAATGTGCTCTGGAGATTTAAATT				2p25.3e	PREDICTED: Homo sapiens similar to syntrophin, gamma 2 (LOC100132833), mRNA.					
Homo sapiens	RefSeq	XR_042176.1	ILMN_341556	MIRH1	XR_042176.1	XR_042176.1		407975	169206297	XR_042176.1	MIRH1		ILMN_3300937	0004150468	M	134	CCATTTGGGAGAGGCCAGCCATTGGAAGAGCCACCACTTCCAGTGCTAGT				13q31.3b	PREDICTED: Homo sapiens ncRNA (MIRH1), miscRNA.					
Homo sapiens	RefSeq	XM_927516.1	ILMN_137066	LOC619207	XM_927516.1	XM_927516.1		619207	89031677	XM_927516.1	LOC619207	XP_932609.1	ILMN_1764782	0006110370	A	1783	GGTCTGGATTACCTGTGCAGGATTGTCAGAGGACAGGCCACAGGCTGCTG	10	+	135128405-135128424:135128600-135128629	10q26.3f	PREDICTED: Homo sapiens scavenger receptor protein family member (LOC619207), mRNA.					
Homo sapiens	RefSeq	XM_943929.1	ILMN_33198	LOC388117	XM_943929.1	XM_943929.1		388117	89038954	XM_943929.1	LOC388117	XP_949022.1	ILMN_1804766	0006420370	A	617	GCTGCTCTGCAACAACAGGTGGACTCATCTGTCTCCATCACACTGTGGCC					PREDICTED: Homo sapiens hypothetical LOC388117 (LOC388117), mRNA.					
Homo sapiens	RefSeq	NM_018655.2	ILMN_30206	LENEP	NM_018655.2	NM_018655.2		55891	57242772	NM_018655.2	LENEP	NP_061125.1	ILMN_1736447	0003710242	S	204	ATTAATGGTAGCAGGGAACTGCCTCCTCTCCCCACCAGCACCATGGCTGG	1	+	153232889-153232893:153232894-153232938	1q21.3e	Homo sapiens lens epithelial protein (LENEP), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10655141] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7641850] [evidence TAS]	LEP503	LEP503
Homo sapiens	RefSeq	NM_152905.2	ILMN_4251	NEDD1	NM_152905.2	NM_152905.2		121441	34303960	NM_152905.2	NEDD1	NP_690869.1	ILMN_1743208	0001690735	S	1840	CTGTCACTGCTGGAGTTGCCAGTTCACTCTCAGAAAAAATAGCCGACAGC	12	+	95863620-95863669	12q23.1a	Homo sapiens neural precursor cell expressed, developmentally down-regulated 1 (NEDD1), mRNA.				TUBGCP7; FLJ35902; GCP-WD	TUBGCP7; FLJ35902; GCP-WD
Homo sapiens	RefSeq	NM_152905.2	ILMN_4251	NEDD1	NM_152905.2	NM_152905.2		121441	34303960	NM_152905.2	NEDD1	NP_690869.1	ILMN_2206151	0000130168	S	1967	GGATGACTTTAGAGAAGCATGCCATAGGGACATTGTGAATTTGCAAGTGG	12	+	95863747-95863758:95869341-95869378	12q23.1a	Homo sapiens neural precursor cell expressed, developmentally down-regulated 1 (NEDD1), mRNA.				TUBGCP7; FLJ35902; GCP-WD	TUBGCP7; FLJ35902; GCP-WD
Homo sapiens	RefSeq	NM_006165.2	ILMN_18461	NFRKB	NM_006165.2	NM_006165.2		4798	23346419	NM_006165.2	NFRKB	NP_006156.2	ILMN_1718990	0000060408	S	3997	CCCTGCATCCCATCTCCAACAGGGAACAGCTTCTGGCTCCTCCAAAGCAG	11	-	129239879-129239928	11q24.3b	Homo sapiens nuclear factor related to kappaB binding protein (NFRKB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 1777480] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 1777480] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 1777480] [evidence TAS]	DKFZp547B2013	DKFZp547B2013
Homo sapiens	RefSeq	NM_001098406.1	ILMN_308370	GAGE12J	NM_001098406.1	NM_001098406.1		729396	148491061	NM_001098406.1	GAGE12J	NP_001091876.1	ILMN_3243333	0004590487	S	24	CACGTGAAGAACGCCAGGGAGCTGTGAGGCAGTGCTGTGTGGTTCCTGCC	X	+	49065483-49065532	Xp11.23b	Homo sapiens G antigen 12J (GAGE12J), mRNA.				GAGE11	GAGE11
Homo sapiens	RefSeq	NM_005558.3	ILMN_164491	LAD1	NM_005558.3	NM_005558.3		3898	32455232	NM_005558.3	LAD1	NP_005549.2	ILMN_1782389	0001170349	A	2357	GGCTGCCATGGCCAGGAGCTAAGTGCCTTTTTGTGTGCAACCACTTACCC	1	-	201350398-201350447	1q32.1c	Homo sapiens ladinin 1 (LAD1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9119369] [evidence TAS]	LadA; MGC10355	MGC10355; LadA
Homo sapiens	RefSeq	NM_005558.3	ILMN_164491	LAD1	NM_005558.3	NM_005558.3		3898	32455232	NM_005558.3	LAD1	NP_005549.2	ILMN_1701581	0003130082	I	2598	CACTCAGCAGTCCTAGCTTGGTGACTGGGAACTGCCACATACAGGGCCAG	1	-	201350157-201350206	1q32.1c	Homo sapiens ladinin 1 (LAD1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9119369] [evidence TAS]	LadA; MGC10355	MGC10355; LadA
Homo sapiens	RefSeq	NM_206827.1	ILMN_17784	RASL11A	NM_206827.1	NM_206827.1		387496	45592962	NM_206827.1	RASL11A	NP_996563.1	ILMN_1651902	0005910291	S	1237	AGAAGAGCCTCCATCATCCCTCGGCCCCGCTCTCCCAACATGCAGGACCT	13	+	26745521-26745570	13q12.2a	Homo sapiens RAS-like, family 11, member A (RASL11A), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_015986.2	ILMN_22668	CRLF3	NM_015986.2	NM_015986.2		51379	27764872	NM_015986.2	CRLF3	NP_057070.2	ILMN_1660579	0001740041	S	1358	GGGTGCTTGGCTTTGGTTTTCAGGGTCTAACGTAGCTGTCCTCAGCCCAG	17	-	26135274-26135323	17q11.2c	Homo sapiens cytokine receptor-like factor 3 (CRLF3), mRNA.				CREME9; FRWS; CYTOR4; MGC20661	CREME9; FRWS; CYTOR4; MGC20661
Homo sapiens	RefSeq	NM_015986.2	ILMN_22668	CRLF3	NM_015986.2	NM_015986.2		51379	27764872	NM_015986.2	CRLF3	NP_057070.2	ILMN_2155228	0000670026	S	2375	GCACGTGTGTATCCAATCTGCCTGTGACATGCATTTTACTCTTTGCAGAG	17	-	26134257-26134306	17q11.2c	Homo sapiens cytokine receptor-like factor 3 (CRLF3), mRNA.				CREME9; FRWS; CYTOR4; MGC20661	CREME9; FRWS; CYTOR4; MGC20661
Homo sapiens	RefSeq	NM_018166.1	ILMN_3804	FAM176B	NM_018166.1	NM_018166.1		55194	8922566	NM_018166.1	FAM176B	NP_060636.1	ILMN_1769092	0007100561	S	836	ACATGAGCTCAGAGCTACCCCACACCTTCGGACTGCCTCGGCCCCCACAG	1	-	36787800-36787849	1p34.3d	Homo sapiens family with sequence similarity 176, member B (FAM176B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ10647; RP11-268J15.2	RP11-268J15.2; FLJ10647
Homo sapiens	RefSeq	NM_003672.2	ILMN_7206	CDC14A	NM_003672.3	NM_003672.3		8556	150417993	NM_003672.3	CDC14A	NP_003663.2	ILMN_1774930	0006590475	I	3443	GAGGAGCGTTACATCCTGATATCCTTCCAGGCTGCTTAAGAATGGACTGC	1	+	100757594-100757643	1p21.2a	Homo sapiens CDC14 cell division cycle 14 homolog A (S. cerevisiae) (CDC14A), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9367992] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9367992] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16221885] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	hCDC14; cdc14	Cdc14A1; Cdc14A2; hCDC14; cdc14
Homo sapiens	RefSeq	XM_935498.1	ILMN_34111	LOC641726	XM_935498.1	XM_935498.1		641726	89026984	XM_935498.1	LOC641726	XP_940591.1	ILMN_1695694	0006650154	S	71	CCTCGAGTTCCAATTGGCTGCGCGTGGCGGTCGGTCCGATAGGCGCGCCT					PREDICTED: Homo sapiens similar to Phosphorylase b kinase gamma catalytic chain, skeletal muscle isoform (Phosphorylase kinase gamma subunit 1) (LOC641726), mRNA.					
Homo sapiens	RefSeq	NM_033207.2	ILMN_13306	OPALIN	NM_033207.3	NM_033207.3		93377	91932797	NM_033207.3	OPALIN	NP_149984.1	ILMN_1666090	0002260739	S	3249	CAGCCCTTGGGCCGATTGTTGATCATCCAGAGCCTCAGTTCTGTACTTGT	10	-	98103742-98103791	10q24.1a	Homo sapiens oligodendrocytic myelin paranodal and inner loop protein (OPALIN), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11256614] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TMP10; HTMP10	TMP10; HTMP10
Homo sapiens	RefSeq	XM_928789.1	ILMN_42489	LOC645799	XM_928789.1	XM_928789.1		645799	89040516	XM_928789.1	LOC645799	XP_933882.1	ILMN_1791164	0004920187	S	139	CTGCAGTCCACGGAGCACGTTCTCGGTGTGCAGCTCATCCTGACTTTCTC	16	-	74096566-74096615	16q23.1a	PREDICTED: Homo sapiens similar to carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 (LOC645799), mRNA.					
Homo sapiens	RefSeq	NM_000449.3	ILMN_171814	RFX5	NM_000449.3	NM_000449.3		5993	71040087	NM_000449.3	RFX5	NP_000440.1	ILMN_2363843	0002490427	A	2756	CTATATCATGGACAACACCTTTGGGGAAAAGGGTGGGGGTCAGCCTCCCC	1	-	151313928-151313977	1q21.2d	Homo sapiens regulatory factor X, 5 (influences HLA class II expression) (RFX5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9806546] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9806546] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16464847] [evidence IPI]		
Homo sapiens	RefSeq	XM_001725044.1	ILMN_334834	LOC100128300	XM_001725044.1	XM_001725044.1		100128300	169201173	XM_001725044.1	LOC100128300	XP_001725096.1	ILMN_3252969	0006590487	M	505	CGCAGGGACTTTTCTGTGGCTTCCAGAGGTGTGGGGCAAAGGTGGAGTCT				10q24.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128300 (LOC100128300), mRNA.					
Homo sapiens	Unigene	Hs.579295	ILMN_131476	HS.579295	Hs.579295		Hs.579295		3041514	AA906391			ILMN_1848461	0004060129	S	78	TCCAGTTGCTGTTTCTTTGCTGTTTCTGGTGGGGAGGGGGGATTCGCTCC	17	-	36218946-36218995		oj99c05.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1506440 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022495.3	ILMN_25282	C14ORF135	NM_022495.5	NM_022495.5		64430	145580589	NM_022495.5	C14orf135	NP_071940.4	ILMN_1680781	0004780053	S	3417	ACTTGAGGACTTCTCCACACCCCCATTCAGATGCCTGAGAACAGCTAAGC	14	+	59670770-59670819	14q23.1c	Homo sapiens chromosome 14 open reading frame 135 (C14orf135), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ38170; FBP2; FLJ12799	FLJ38170; FBP2; FLJ12799
Homo sapiens	RefSeq	NM_016045.2	ILMN_15088	SLMO2	NM_016045.2	NM_016045.2		51012	117553614	NM_016045.2	SLMO2	NP_057129.2	ILMN_3240893	0001190129	S	1729	GGGCGGTGGGGAAGAACAAGCATAATGGTAGGGGGAGGCTTGGCCTGAAA	20	-	57608984-57609033	20q13.32b	Homo sapiens slowmo homolog 2 (Drosophila) (SLMO2), mRNA.				C20orf45; PRELID3B; dJ543J19.5	dJ543J19.5
Homo sapiens	RefSeq	XM_939038.1	ILMN_45122	LOC649957	XM_939038.1	XM_939038.1		649957	88959204	XM_939038.1	LOC649957	XP_944131.1	ILMN_1724501	0000940408	S	344	CACTCGGAATTATTCACTGTTTCAGGGGACCTGGATGCCAGCAGTGGGGC					PREDICTED: Homo sapiens similar to solute carrier family 19, member 3 (LOC649957), mRNA.					
Homo sapiens	RefSeq	NM_000846.4	ILMN_371228	GSTA2	NM_000846.4	NM_000846.4		2939	215276986	NM_000846.4	GSTA2	NP_000837.3	ILMN_3251540	0003390315	S	477	GCCCTTTAGTCAACCTGAGGAACAAGATGCCAAGCTTGCCTTGATCCAAG	6	-	52617689-52617738	6p12.1d	Homo sapiens glutathione S-transferase alpha 2 (GSTA2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 3138230] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_927654.3	ILMN_30675	LOC644525	XM_927654.3	XM_927654.3		644525	169215679	XM_927654.3	LOC644525	XP_932747.1	ILMN_3204842	0004070594	A	46	TGCTCCTGCTTCAGGTGCAGAAATACAGCTATTTCCAGTGCCAGCTGTTG	22	-	14464778-14464826:14480515-14480515	22q11.1c	PREDICTED: Homo sapiens hypothetical LOC644525 (LOC644525), mRNA.					
Homo sapiens	RefSeq	XR_016229.2	ILMN_183362	LOC441505	XR_016229.2	XR_016229.2		441505	169216589	XR_016229.2	LOC441505		ILMN_3274435	0004670673	M	1222	GATTCCAGCTGGCACTCAAGGACTGTGAAGAATGTATCCAGCTAGAACCG	X	-	85226729-85226778	Xq21.2a	PREDICTED: Homo sapiens misc_RNA (LOC441505), miscRNA.					
Homo sapiens	RefSeq	NM_004518.2	ILMN_136951	KCNQ2	NM_004518.2	NM_004518.2		3785	26051259	NM_004518.2	KCNQ2	NP_004509.2	ILMN_1788663	0005900273	I	7364	TACTCACACGGACAGGTTGATGCCAGAGCCGTAAGAATGCGCCAGTGCGG	20	-	61502142-61502191	20q13.33d-q13.33e	Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 2 (KCNQ2), transcript variant 3, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 9677360] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 9677360] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9425895] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9425895] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [pmid 9677360] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	KVEBN1; KV7.2; ENB1; BFNC; EBN; KCNA11; HNSPC; EBN1	KVEBN1; KV7.2; ENB1; BFNC; EBN; KCNA11; HNSPC; EBN1
Homo sapiens	RefSeq	XM_928303.1	ILMN_39986	LOC645262	XM_928303.1	XM_928303.1		645262	88943451	XM_928303.1	LOC645262	XP_933396.1	ILMN_1666839	0006100431	S	841	CTCCAGTCGCTGTTGAATGGAGTTTCCGTCTCCAGTCTCAGCCAAAGCAG	1	-	147582244-147582244:147599577-147599625	1q21.1e	PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein isoform 1 (LOC645262), mRNA.					
Homo sapiens	RefSeq	NM_007161.2	ILMN_22195	LST1	NM_007161.2	NM_007161.2		7940	45505164	NM_007161.2	LST1	NP_009092.2	ILMN_1718936	0000650112	I	281	TGCTTCTGGCAGTGGTCCTTCTGTCCGCCTGCCTGTGTTGGCTGCATCGA	6	+	31555457-31555506	6p21.33a	Homo sapiens leukocyte specific transcript 1 (LST1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11478849] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11478849] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10706707] [evidence IDA]	The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7590964] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10944527] [evidence NAS]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10944527] [evidence NAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [pmid 11478849] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation [goid 50672] [pmid 10706707] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	D6S49E; LST-1; B144; MGC119007; MGC119006	D6S49E; LST-1; B144; MGC119007; MGC119006
Homo sapiens	RefSeq	NM_001187.1	ILMN_10365	BAGE	NM_001187.1	NM_001187.1		574	4557346	NM_001187.1	BAGE	NP_001178.1	ILMN_1768994	0002320184	S	174	CGGTAGGAGTGGGGCTGGAGCAGTAAGATGGCGGCCAGAGCGGTTTTTCT	21	-	10119509-10119517:10120594-10120608:10120609-10120634	21p11.1d	Homo sapiens B melanoma antigen (BAGE), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			BAGE1	BAGE1
Homo sapiens	RefSeq	NM_001005505.1	ILMN_28162	CACNA2D2	NM_006030.2	NM_006030.2		9254	54112393	NM_006030.2	CACNA2D2	NP_006021.2	ILMN_1711049	0003120180	A	5085	CTGGGTCTAATCCTTCTCATTACCCACCCGACCTGGCTGCCCCTCACCTT	3	-	50400935-50400984	3p21.31b	Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 2 (CACNA2D2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	gene 26; KIAA0558; LUAC11.1; CACNA2D	gene 26; KIAA0558; LUAC11.1; CACNA2D
Homo sapiens	RefSeq	XM_001716943.1	ILMN_351402	LOC100130087	XM_001716943.1	XM_001716943.1		100130087	169168309	XM_001716943.1	LOC100130087	XP_001716995.1	ILMN_3195563	0007400563	A	159	ACCACAGTCAGCCCGCGGCTTTTCTGTCTTCCTTTCTGGCCCAGCGAGAG				5q22.3b	PREDICTED: Homo sapiens hypothetical protein LOC100130087 (LOC100130087), mRNA.					
Homo sapiens	RefSeq	NM_033426.2	ILMN_24671	KIAA1737	NM_033426.2	NM_033426.2		85457	32307174	NM_033426.2	KIAA1737	NP_219494.2	ILMN_1788347	0007050204	S	3864	CGGAGGTGACCAGAAAGATCTCCATCGGTTGCCCAAGGCTGTAAGTAGTG	14	+	76652899-76652948	14q24.3c	Homo sapiens KIAA1737 (KIAA1737), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]				
Homo sapiens	RefSeq	XM_926751.1	ILMN_34325	LIPL4	XM_926751.1	XM_926751.1		643418	89031555	XM_926751.1	LIPL4	XP_931844.1	ILMN_1678628	0000270632	S	97	CAGCTGCCGGCACTCTTGATACTCAGTGGAAACATGAAGGATTCCGTCAA	10	+	90507131-90507148:90509552-90509583	10q23.31b	PREDICTED: Homo sapiens lipase-like, ab-hydrolase domain containing 4 (LIPL4), mRNA.					
Homo sapiens	RefSeq	XM_937212.1	ILMN_34325	LIPL4	XM_926751.1	XM_926751.1		643418	89031555	XM_926751.1	LIPL4	XP_931844.1	ILMN_1674338	0007560026	S	256	GGAACTTTAAATGCTGGTGGATTCCTTGATTTGGAAAATGAAGTGAATCC	10	+	90511182-90511231	10q23.31b	PREDICTED: Homo sapiens lipase-like, ab-hydrolase domain containing 4 (LIPL4), mRNA.					
Homo sapiens	RefSeq	XM_936385.1	ILMN_34245	LOC642231	XM_936385.1	XM_936385.1		642231	89026496	XM_936385.1	LOC642231	XP_941478.1	ILMN_1757601	0007210193	S	566	GTGCGAGCCTTCATCTGTGCCAGATAGCAGCTGACCACAACCTTGAAGAC					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region C5 precursor (LOC642231), mRNA.					
Homo sapiens	RefSeq	XM_001719318.1	ILMN_349732	LOC100129042	XM_001719318.1	XM_001719318.1		100129042	169161024	XM_001719318.1	LOC100129042	XP_001719370.1	ILMN_3269995	0000070082	M	557	GAGCTGCCCCGATCCACTTGCAGATCAGAATCTCCGGGCACCCCTTGCCA				1p36.21b	PREDICTED: Homo sapiens hypothetical protein LOC100129042 (LOC100129042), mRNA.					
Homo sapiens	RefSeq	NM_001085382.1	ILMN_307348	PSAPL1	NM_001085382.1	NM_001085382.1		768239	145977197	NM_001085382.1	PSAPL1	NP_001078851.1	ILMN_3238264	0006960241	S	4499	TTCTCGGCCACACCAGATGCAGAGGGGCTGTGGGAGCCTGGAAAAGGGCT	4	-	7483052-7483101	4p16.1e	Homo sapiens prosaposin-like 1 (PSAPL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]		FLJ40379	FLJ40379
Homo sapiens	RefSeq	NM_021794.2	ILMN_4470	ADAM30	NM_021794.2	NM_021794.2		11085	31881769	NM_021794.2	ADAM30	NP_068566.2	ILMN_2100871	0000830601	S	2685	ACCAGTGCATTCTACTTCTCGAGTGTTCACTTGCCCCTCAGTTTGTGACC	1	-	120436379-120436428	1p12a	Homo sapiens ADAM metallopeptidase domain 30 (ADAM30), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10512762] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10512762] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	svph4	svph4
Homo sapiens	Unigene	Hs.565309	ILMN_117801	HS.565309	Hs.565309		Hs.565309		19751401	BQ016124			ILMN_1888621	0002630471	S	608	CCATCTATCCATCTACCCACCCATCATTTATAAGGCACCTACCATGTTCC	2	+	238259888-238259931:238259934-238259939		UI-H-DT1-awb-m-01-0-UI.s1 NCI_CGAP_DT1 Homo sapiens cDNA clone IMAGE:5887272 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004514.3	ILMN_4454	FOXK2	NM_004514.3	NM_004514.3		3607	109702898	NM_004514.3	FOXK2	NP_004505.2	ILMN_2310685	0001570561	A	4387	TTTTTTGCCGTAGGCACCATTCTGCATCTTGAACCCAGACTGAAGTGTGC	17	+	78154897-78154946	17q25.3h	Homo sapiens forkhead box K2 (FOXK2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1909027] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1909027] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 16624804] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12402362] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 1909027] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 12402362] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 1339390] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 16624804] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 1909027] [evidence IDA]	ILF-1; ILF; ILF1	ILF-1; ILF; ILF1
Homo sapiens	RefSeq	NM_004514.3	ILMN_4454	FOXK2	NM_004514.3	NM_004514.3		3607	109702898	NM_004514.3	FOXK2	NP_004505.2	ILMN_2241317	0004890347	I	288	CCTGGAGGGCCGCGAGTTCGAGTATCTGATGAAGAAGCGCTCGGTGACCA	17	+	78071170-78071219	17q25.3h	Homo sapiens forkhead box K2 (FOXK2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1909027] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1909027] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 16624804] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12402362] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 1909027] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 12402362] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 1339390] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 16624804] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 1909027] [evidence IDA]	ILF-1; ILF; ILF1	ILF-1; ILF; ILF1
Homo sapiens	RefSeq	NM_001004750.1	ILMN_17335	OR51B6	NM_001004750.1	NM_001004750.1		390058	52353944	NM_001004750.1	OR51B6	NP_001004750.1	ILMN_1789826	0000540349	S	446	GGGCTGGTCTGTCCATTATGCCAATAGTTGTTCGCCTACACTGGTTTCCC	11	+	5329759-5329808	11p15.4c	Homo sapiens olfactory receptor, family 51, subfamily B, member 6 (OR51B6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11121057] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 11121057] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 11121057] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	HOR5'Beta6	HOR5'Beta6
Homo sapiens	RefSeq	NM_001040078.2	ILMN_165579	LGALS9C	NM_001040078.2	NM_001040078.2		654346	111494238	NM_001040078.2	LGALS9C	NP_001035167.2	ILMN_2080342	0001010731	S	1372	GGAATCCTACAATCCCAGAAGGCGGGCACAGCCAGGGAGAGGGGAGGAGT	17	+	18338637-18338686	17p11.2f	Homo sapiens lectin, galactoside-binding, soluble, 9C (LGALS9C), mRNA.				MGC125972	MGC125972
Homo sapiens	Unigene	Hs.332843	ILMN_86372	HS.332843	Hs.332843		Hs.332843		3802018	AI219815			ILMN_1891885	0006650040	S	326	ATCAACTGGTGAATGTGGCAGTCAGGGCCTCCTGGGTATAGAAGAGCCGC	15	+	37599214-37599263		qg83a07.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1841748 3, mRNA sequence					
Homo sapiens	RefSeq	NM_032367.1	ILMN_18086	ZBED3	NM_032367.2	NM_032367.2		84327	141802379	NM_032367.2	ZBED3	NP_115743.1	ILMN_1683215	0005310086	S	1127	TCGAAGCCAGAGCAGAACCAAAACTCACTTCCATGGGGTCACCGGGGGTG	5	-	76408530-76408579	5q14.1a	Homo sapiens zinc finger, BED-type containing 3 (ZBED3), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC15435	MGC15435
Homo sapiens	RefSeq	NM_206899.1	ILMN_28954	OR10P1	NM_206899.1	NM_206899.1		121130	53828665	NM_206899.1	OR10P1	NP_996782.1	ILMN_1759242	0006290280	S	631	CCCTTCTCTCTGATTGTCACCTCTTACATCCGCATCCTGGGTGCCATCCT	12	+	54317573-54317622	12q13.2b	Homo sapiens olfactory receptor, family 10, subfamily P, member 1 (OR10P1), mRNA.				OR12-7; OR10P2P; OR10P3P; OST701; OR10P1P	OR12-7; OR10P2P; OR10P3P; OST701; OR10P1P
Homo sapiens	RefSeq	NM_183063.1	ILMN_12234	RNF7	NM_183063.1	NM_183063.1		9616	34304330	NM_183063.1	RNF7	NP_898886.1	ILMN_1731123	0001780593	I	396	CAGCCCTCGCTGTCCCCTCTGTCTCACTGGCTTCTCACCAGCCTTGTCTG	3	+	142944263-142944312	3q23c	Homo sapiens ring finger protein 7 (RNF7), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10082581] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10082581] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10082581] [evidence TAS];  [goid 6980] [pmid 10082581] [evidence TAS]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [pmid 10082581] [evidence TAS]	Interacting selectively with copper (Cu) ions [goid 5507] [pmid 10082581] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10082581] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SAG; ROC2; CKBBP1	SAG; ROC2; CKBBP1
Homo sapiens	RefSeq	NM_015435.3	ILMN_10959	RNF19A	NM_015435.3	NM_015435.3		25897	35493781	NM_015435.3	RNF19A	NP_056250.3	ILMN_2381197	0007160010	A	3605	GGGGAAGTTTGTACCCCATTGATTCTTGGTGCCTTTGGGATCGACTGGGT	8	-	101339139-101339188	8q22.2b	Homo sapiens ring finger protein 19A (RNF19A), transcript variant 2, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 11237715] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [pmid 11237715] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10976766] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF19; DKFZp566B1346; DORFIN	RNF19; DKFZp566B1346; DORFIN
Homo sapiens	RefSeq	NM_015435.3	ILMN_10959	RNF19A	NM_015435.3	NM_015435.3		25897	35493781	NM_015435.3	RNF19A	NP_056250.3	ILMN_1738362	0004590408	I	4	GTCACCAGAAGCTGGAAGAGTCAAAGGACACATTCTCCCCTCAAGCCCCA	8	-	101384610-101384659	8q22.2b	Homo sapiens ring finger protein 19A (RNF19A), transcript variant 2, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 11237715] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [pmid 11237715] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10976766] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF19; DKFZp566B1346; DORFIN	RNF19; DKFZp566B1346; DORFIN
Homo sapiens	RefSeq	NR_031732.1	ILMN_388650	MIR1911	NR_031732.1	NR_031732.1		100302222	269847639	NR_031732.1	MIR1911		ILMN_3310216	0000730086	S	11	TGAGTACCGCCATGTCTGTTGGGCATCCACAGTCTCCCACCAGGCATTGT					Homo sapiens microRNA 1911 (MIR1911), microRNA.					
Homo sapiens	RefSeq	XR_015176.2	ILMN_171132	TYW1B	XR_015176.2	XR_015176.2		441250	169170500	XR_015176.2	TYW1B		ILMN_3298694	0001710402	M	2992	TGTCCGGGCCTCTCATATCACGACCAGACGGCGGGTCTCCATCTTCTTTG	7	-	71372479-71372528	7q11.22c-q11.23a	PREDICTED: Homo sapiens misc_RNA (TYW1B), miscRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]		
Homo sapiens	Unigene	Hs.566309	ILMN_118654	HS.566309	Hs.566309		Hs.566309		7702184	AW770145			ILMN_1909290	0002140168	S	323	TTACATGTCTACCAGTAGAGTATAAGCCTCTTTATCCATGATGCTCACTC	5	-	91897189-91897238		hk58d01.x1 NCI_CGAP_Lym12 Homo sapiens cDNA clone IMAGE:3000865 3, mRNA sequence					
Homo sapiens	RefSeq	NM_013373.2	ILMN_29624	ZDHHC8	NM_013373.2	NM_013373.2		29801	57863251	NM_013373.2	ZDHHC8	NP_037505.1	ILMN_1789492	0004590154	S	3348	CAGGGACCTGAGAGTAAGCACATGACAGCGTCTGCTTGCGTTGTGTCTGT	22	+	18513867-18513916	22q11.21d	Homo sapiens zinc finger, DHHC-type containing 8 (ZDHHC8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF378; ZDHHCL1	ZNF378; ZDHHCL1
Homo sapiens	RefSeq	NM_134433.1	ILMN_29311	RFX2	NM_134433.1	NM_134433.1		5990	19743878	NM_134433.1	RFX2	NP_602309.1	ILMN_2396287	0000270136	A	3181	TCCAAACAGCAGTGCCTGCGTCCCGCTCCACGGAGTCTTCCAGAACACCT	19	-	5944871-5944920	19p13.3b	Homo sapiens regulatory factor X, 2 (influences HLA class II expression) (RFX2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8289803] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	FLJ14226	FLJ14226
Homo sapiens	RefSeq	NM_032451.1	ILMN_502	SPIRE2	NM_032451.1	NM_032451.1		84501	55749599	NM_032451.1	SPIRE2	NP_115827.1	ILMN_1703284	0006040014	S	3080	ACATGTGTCCTGCCTCTCCTGGCCCTACCACATTCTGGTGCTGTCCTCAC	16	+	88465064-88465113	16q24.3b	Homo sapiens spire homolog 2 (Drosophila) (SPIRE2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC117166; Spir-2	MGC117166; Spir-2
Homo sapiens	RefSeq	NM_001129851.1	ILMN_364784	LOC100132832	NM_001129851.1	NM_001129851.1		100132832	193788561	NM_001129851.1	LOC100132832	NP_001123323.1	ILMN_3240438	0004390189	S	134	GCACCGGCCATGCTTTCAGTTTTCAAGAAAGAAGACACCATTATTGCCAA				7q11.23f	Homo sapiens similar to postmeiotic segregation increased 2-like 5 (LOC100132832), mRNA.					
Homo sapiens	RefSeq	XM_940160.1	ILMN_37597	LOC651051	XM_940160.1	XM_940160.1		651051	89028597	XM_940160.1	LOC651051	XP_945253.1	ILMN_1696218	0002940524	S	142	TTGCCCGGGGCCAGCAGGAAAGCAAAACGTAGCAGGACTATGCGGAATTC					PREDICTED: Homo sapiens similar to T-box 1 isoform C (LOC651051), mRNA.					
Homo sapiens	RefSeq	NM_001922.2	ILMN_1796	DCT	NM_001922.2	NM_001922.2		1638	6041666	NM_001922.2	DCT	NP_001913.2	ILMN_1701783	0001440682	S	2003	GCTGGCCAAGCCACAGTTCTGACGCTGACAATAAAGGAACTAATCCTCAC	13	-	93890074-93890123	13q32.1a	Homo sapiens dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) (DCT), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8206391] [evidence TAS]; The lipid bilayer surrounding a melanosome [goid 33162] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine [goid 6583] [evidence ISS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 8206391] [evidence TAS]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-dopachrome = 5,6-dihydroxyindole-2-carboxylate [goid 4167] [evidence ISS]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 8206391] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TYRP2	TYRP2
Homo sapiens	RefSeq	XM_001129789.1	ILMN_162207	LOC728326	XM_001129789.1	XM_001129789.1		728326	113428211	XM_001129789.1	LOC728326	XP_001129789.1	ILMN_3225754	0005860612	A	579	TTCCAAGATCTGGACTGTGGGATTCCAAGGGGCCTGAACCCGAGTTTGGG	19	+	41119838-41119887	19q13.12a	PREDICTED: Homo sapiens hypothetical LOC728326 (LOC728326), mRNA.					
Homo sapiens	RefSeq	XM_377926.3	ILMN_40816	LOC402634	XM_377926.3	XM_377926.3		402634	89024768	XM_377926.3	LOC402634	XP_377926.3	ILMN_1656921	0003130411	A	34	TGTGTTTGCGCTGCTGTCCCTCGCTGCAGGTTGGCGCCCTGTGGGATAGC	7	-	2400994-2401043	7p22.2c	PREDICTED: Homo sapiens similar to mesenchymal stem cell protein DSC92 isoform 2 (LOC402634), mRNA.					
Homo sapiens	RefSeq	XM_943597.1	ILMN_37104	LOC649136	XM_943597.2	XM_943597.2		649136	113426403	XM_943597.2	LOC649136	XP_948690.1	ILMN_1776249	0002120546	S	1026	CGCCCTCAGCCTCAGCTTTCTCAGCTATCAAAAGAGAGAACACCCAGCTC					PREDICTED: Homo sapiens hypothetical LOC649136 (LOC649136), mRNA.					
Homo sapiens	RefSeq	XR_016257.2	ILMN_172178	LOC346329	XR_016257.2	XR_016257.2		346329	169170092	XR_016257.2	LOC346329		ILMN_3277559	0000070370	M	1094	ACGGAGACAAGGGCCGGGACAAACCTTCCTTCACACCCAACCCGCGGCTG	7	-	65607502-65607551	7q11.21e	PREDICTED: Homo sapiens misc_RNA (LOC346329), miscRNA.					
Homo sapiens	RefSeq	XM_932333.1	ILMN_40362	LOC653512	XM_932333.1	XM_932333.1		653512	88953833	XM_932333.1	LOC653512	XP_937426.1	ILMN_1783022	0001450594	S	194	GATGGCAACTCGGGGTTTCCACTGCGGGTGATCTCGGGACACCACGGGTT	2	+	178767148-178767197		PREDICTED: Homo sapiens similar to oxysterol binding protein-like 6 (LOC653512), mRNA.					
Homo sapiens	RefSeq	NM_001033578.1	ILMN_22524	SGK3	NM_001033578.1	NM_001033578.1		23678	75813625	NM_001033578.1	SGK3	NP_001028750.1	ILMN_1729785	0003800673	I	70	TGACGCGTCAAGGAGGAAACGCCGGCGCCCGGCGGCCCTGCCGGGAAGGA	8	+	67624960-67625009	8q13.1b	Homo sapiens serum/glucocorticoid regulated kinase family, member 3 (SGK3), transcript variant 3, mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10548550] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10548550] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10548550] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SGK2; CISK; DKFZp781N0293; SGKL	SGK2; CISK; DKFZp781N0293; SGKL
Homo sapiens	RefSeq	NM_170709.1	ILMN_22524	SGK3	NM_001033578.1	NM_001033578.1		23678	75813625	NM_001033578.1	SGK3	NP_001028750.1	ILMN_1747020	0003940376	A	3868	CTCTTTGGCTTAAAATGTTCAGCAGAATTGGGCAGTGGGGGTGACTTTTC	8	+	67773894-67773943	8q13.1b	Homo sapiens serum/glucocorticoid regulated kinase family, member 3 (SGK3), transcript variant 3, mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10548550] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10548550] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10548550] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SGK2; CISK; DKFZp781N0293; SGKL	SGK2; CISK; DKFZp781N0293; SGKL
Homo sapiens	RefSeq	XM_378742.2	ILMN_40731	FLJ45994	XM_943185.2	XM_943185.2		400645	113427909	XM_943185.2	FLJ45994	XP_948278.1	ILMN_1777312	0003370204	A	848	CACGAGGCCAGCATTACCCTGATACCAACGCCAGACAAAGACACTATAAG				18q11.2e-q12.1a	PREDICTED: Homo sapiens hypothetical gene supported by AK127888 (FLJ45994), mRNA.					
Homo sapiens	RefSeq	NM_001155.3	ILMN_3328	ANXA6	NM_001155.3	NM_001155.3		309	71773328	NM_001155.3	ANXA6	NP_001146.2	ILMN_1678612	0002490598	A	2693	GCCTGGGTTCAAATCTGCATCTGCCATGCACTTGTTTCTGACCTTAGGCC	5	-	150489354-150489403	5q33.1d	Homo sapiens annexin A6 (ANXA6), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15576473] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	ANX6; CBP68	ANX6; CBP68
Homo sapiens	RefSeq	NM_021023.3	ILMN_5878	CFHR3	NM_021023.3	NM_021023.3		10878	54792786	NM_021023.3	CFHR3	NP_066303.2	ILMN_1805799	0004260008	S	1445	TTCCCTTATTGTAGCCATGGTCCTCTAGATGCAGTTAACCAAATAGGGTC	1	+	195029674-195029723	1q31.3c	Homo sapiens complement factor H-related 3 (CFHR3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8428964] [evidence TAS]			FHR3; DOWN16; CFHL3; HLF4; FHR-3	FHR3; DOWN16; CFHL3; HLF4; FHR-3
Homo sapiens	RefSeq	NR_015405.1	ILMN_370328	LOC339788	NR_015405.1	NR_015405.1		339788	213511940	NR_015405.1	LOC339788		ILMN_3238102	0003830561	S	2053	GCTTGTCAGATGTTTTCTCCTGGGTTAGACTGGGCTTACAGGTTTTGGGG	2	-	8062618-8062667		Homo sapiens hypothetical LOC339788 (LOC339788), non-coding RNA.					
Homo sapiens	RefSeq	NM_006294.3	ILMN_356983	UQCRB	NM_006294.3	NM_006294.3		7381	169658386	NM_006294.3	UQCRB	NP_006285.1	ILMN_3251491	0001260204	S	4119	CACGAGCACTATGGAAGATTTCTCCATTCTGCGCCCCACCAACTCCCTCC	8	-	97239554-97239603	8q22.1d	Homo sapiens ubiquinol-cytochrome c reductase binding protein (UQCRB), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [pmid 3056408] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]; The phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis [goid 6119] [pmid 3056408] [evidence TAS]; The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III [goid 6122] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [pmid 3056408] [evidence TAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c [goid 8121] [evidence IEA]		
Homo sapiens	RefSeq	NM_175737.2	ILMN_29407	KLB	NM_175737.2	NM_175737.2		152831	31343329	NM_175737.2	KLB	NP_783864.1	ILMN_1731688	0005550292	S	2985	GCAGCAGGGGCTTCCCTTTTGAGAACAGTAGTTCTAGATGCAGTCAGACC	4	+	39126454-39126503	4p14c-p14b	Homo sapiens klotho beta (KLB), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	BKL; MGC142213	BKL; MGC142213
Homo sapiens	RefSeq	NM_153811.1	ILMN_7226	SLC38A6	NM_153811.1	NM_153811.1		145389	24429573	NM_153811.1	SLC38A6	NP_722518.1	ILMN_1696622	0004010452	S	1372	GCAGAGAGGATTTTCTGTCATGGAAAAAGCTTGGGGCATTCGTTTTGCTC	14	+	60588572-60588606:60588820-60588834	14q23.1c	Homo sapiens solute carrier family 38, member 6 (SLC38A6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NAT-1; MGC102697	NAT-1; MGC102697
Homo sapiens	RefSeq	XM_925903.3	ILMN_32263	FAM22E	XM_925903.3	XM_925903.3		283008	169188153	XM_925903.3	FAM22E	XP_930996.2	ILMN_3244487	0006330097	S	4348	GGTTTCTAAAACAGTTCCCTCCCAACACACCATCACCAATGGGTCCCATC	10	+	81601283-81601332	10q22.3f	PREDICTED: Homo sapiens family with sequence similarity 22, member E, transcript variant 1 (FAM22E), mRNA.					
Homo sapiens	RefSeq	XM_937211.1	ILMN_137868	RGN	XM_937211.1	XM_937211.1		9104	89060714	XM_937211.1	RGN	XP_942304.1	ILMN_1727770	0005810100	I	390	CTCTGATCTGGGGGAAGTGTATCCAGCCTTGCCAGTTCTTAGCCAGGTGT				Xp11.3a	PREDICTED: Homo sapiens regucalcin (senescence marker protein-30), transcript variant 1 (RGN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence ISS]; Any process that activates or increases the rate of ATP hydrolysis by an ATPase [goid 32781] [evidence ISS]; Any process that modulates the frequency, rate or extent of calcium-mediated signaling, the process by which a cell uses calcium ions to convert an extracellular signal into a response [goid 50848] [evidence ISS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Modulates the activity of an enzyme [goid 30234] [evidence IEA]		
Homo sapiens	RefSeq	NM_004895.3	ILMN_168698	NLRP3	NM_001079821.1	NM_001079821.1		114548	119395763	NM_001079821.1	NLRP3	NP_001073289.1	ILMN_1712026	0003420154	A	3408	CCTTTACGCCAGGGTGAGGAAGACACCAGGACAATGACAGCATCGGGTGT	1	+	245678605-245678654	1q44e	Homo sapiens NLR family, pyrin domain containing 3 (NLRP3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15967716] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12032915] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12093792] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11786556] [evidence NAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal [goid 9595] [pmid 15967716] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [pmid 14662828] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the transfer of NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters, from the cytoplasm into the nucleus, across the nuclear membrane [goid 42347] [pmid 14662828] [evidence IDA]; Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43280] [pmid 15030775] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [pmid 15030775] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [pmid 15967716] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15030775] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively, in a non-covalent manner, with peptidoglycan, any of a class of glycoconjugates found in bacterial cell walls [goid 42834] [pmid 15967716] [evidence TAS]	AII/AVP; AGTAVPRL; PYPAF1; CIAS1; C1orf7; FCAS; AVP; NALP3; MWS; FCU; AII; CLR1.1	AII/AVP; AGTAVPRL; PYPAF1; C1orf7; FCAS; NALP3; MWS; FCU
Homo sapiens	RefSeq	XM_930956.1	ILMN_181724	LOC727851	XM_001126233.1	XM_001126233.1		727851	113413173	XM_001126233.1	LOC727851	XP_001126233.1	ILMN_1681811	0007560291	I	172	TACCTGGCCTATCTTTCATAGGTTATATAAATTCCTTGGTTCCCAGTTTT	2	-	112880573-112880622	2q13d	PREDICTED: Homo sapiens similar to RAN binding protein 2, transcript variant 4 (LOC727851), mRNA.					
Homo sapiens	RefSeq	NM_006598.1	ILMN_29883	SLC12A7	NM_006598.1	NM_006598.1		10723	5730042	NM_006598.1	SLC12A7	NP_006589.1	ILMN_1753254	0004880403	S	4678	CCCAAGGGAATCAACCCCATCAACAAAGTTCAAATCGGGGCAGAGGCTGC	5	-	1104002-1104051	5p15.33d	Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 7 (SLC12A7), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10347194] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Cl-(out) = K+(in) + Cl-(in) [goid 15379] [pmid 10347194] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KCC4; DKFZP434F076	KCC4; DKFZP434F076
Homo sapiens	RefSeq	NM_138292.3	ILMN_16722	ATM	NM_138292.3	NM_138292.3		472	73486662	NM_138292.3	ATM	NP_612149.1	ILMN_1716231	0007330592	I	19	TCTACAGGTTGGCTGCATAGAAGAAAAAGGTAGAGTTATTTATAATCTTG	11	+	107663347-107663396	11q22.3c	Homo sapiens ataxia telangiectasia mutated (ATM), transcript variant 2, mRNA.	The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12607003] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12556884] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11331603] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10550055] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10959836] [evidence EXP]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IEA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IEA]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9733515] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [pmid 11943150] [evidence IMP]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 7792600] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7792600] [evidence TAS]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [pmid 11375976] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11375976] [evidence IDA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [pmid 11375976] [evidence IMP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11375976] [evidence IDA]	ATD; DKFZp781A0353; ATE; TELO1; ATA; TEL1; ATDC; AT1; MGC74674; ATC	ATD; TELO1; ATA; AT1; ATC; DKFZp781A0353; ATE; TEL1; ATDC; MGC74674
Homo sapiens	RefSeq	NM_032945.2	ILMN_14212	TNFRSF6B	NM_032945.2	NM_032945.2		8771	29893809	NM_032945.2	TNFRSF6B	NP_116563.1	ILMN_2331232	0002190255	A	777	TGCCGCACCGGCTTCTTCGCGCACGCTGGTTTCTGCTTGGAGCACGCATC	20	+	61798907-61798956	20q13.33e	Homo sapiens tumor necrosis factor receptor superfamily, member 6b, decoy (TNFRSF6B), transcript variant M68C, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9872321] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9872321] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9872321] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10318773] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	DJ583P15.1.1; M68; TR6; DCR3	M68; TR6; DJ583P15.1.1; DCR3
Homo sapiens	RefSeq	NM_032945.2	ILMN_14212	TNFRSF6B	NM_032945.2	NM_032945.2		8771	29893809	NM_032945.2	TNFRSF6B	NP_116563.1	ILMN_2331231	0005910767	A	1059	GAGGAGTGTGAGCGTGCCGTCATCGACTTTGTGGCTTTCCAGGACATCTC	20	+	61800082-61800131	20q13.33e	Homo sapiens tumor necrosis factor receptor superfamily, member 6b, decoy (TNFRSF6B), transcript variant M68C, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9872321] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9872321] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9872321] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10318773] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	DJ583P15.1.1; M68; TR6; DCR3	M68; TR6; DJ583P15.1.1; DCR3
Homo sapiens	RefSeq	XR_018242.2	ILMN_171944	LOC390183	XR_018242.2	XR_018242.2		390183	169203453	XR_018242.2	LOC390183		ILMN_3199929	0004730368	A	613	GACGTGGTTCATGTGAAAGATGCCAGTGGCAACAGATTTGCCACTCGACC				11q12.1a	PREDICTED: Homo sapiens misc_RNA (LOC390183), miscRNA.					
Homo sapiens	RefSeq	NM_001008221.1	ILMN_9204	AMY1A	NM_001008221.1	NM_001008221.1		276	56549659	NM_001008221.1	AMY1A	NP_001008222.1	ILMN_1797796	0001030161	I	69	CCCCTTGGTATCTGTACATACCTTTGATGTCAGTGTTTAGTACACGTGGC	1	+	103999732-103999781	1p21.1c	Homo sapiens amylase, alpha 1A (salivary) (AMY1A), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2423416] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 2423416] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides containing three or more 1,4-alpha-linked D-glucose units [goid 4556] [pmid 2423416] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16203048] [evidence IPI]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	AMY1; AMY1B	AMY1; AMY1B
Homo sapiens	RefSeq	XM_942602.1	ILMN_31895	LOC651272	XM_942602.1	XM_942602.1		651272	89057464	XM_942602.1	LOC651272	XP_947695.1	ILMN_1656801	0004670315	S	1254	AAGTACCTAGAGGTGGCAGGTGTGCAACCCGGAGAGACCCAGAATGGGAG					PREDICTED: Homo sapiens similar to cytochrome P450 monooxygenase CYP2T1 (LOC651272), mRNA.					
Homo sapiens	RefSeq	NM_005219.2	ILMN_1027	DIAPH1	NM_005219.2	NM_005219.2		1729	31742531	NM_005219.2	DIAPH1	NP_005210.2	ILMN_1661554	0002600131	S	5209	TGTGCCCCTCTCAGCTTTCCATCCCCAGCTAGGAAGAAAGAATGGCACTC	5	-	140875116-140875165	5q31.3c	Homo sapiens diaphanous homolog 1 (Drosophila) (DIAPH1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9360932] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9360932] [evidence NAS]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	LFHL1; hDIA1; DFNA1; DRF1	LFHL1; hDIA1; DFNA1; DRF1
Homo sapiens	Unigene	Hs.567469	ILMN_119650	HS.567469	Hs.567469		Hs.567469		22477381	BC036926			ILMN_1868912	0003370053	S	211	ATGAGCTACAGGAACAAGAGACCCAGTACTTCGGGCCAGGCACGCGGCTC	7	+	142204945-142204977:142208852-142208868		Homo sapiens T cell receptor beta variable 21-1, mRNA (cDNA clone MGC:46491 IMAGE:5225843), complete cds					
Homo sapiens	RefSeq	NR_004385.1	ILMN_351994	RNU105C	NR_004385.1	NR_004385.1		26766	161087005	NR_004385.1	RNU105C		ILMN_3242818	0002480300	S	34	CAGGCTCTGTGGAAGTGGTGTTGGGGAGCATAGACGTTTGGTCCATGACG	8	+	55243279-55243328		Homo sapiens RNA, U105C small nucleolar (RNU105C), small nucleolar RNA.				E1-6; E1-5	E1-6; E1-5
Homo sapiens	RefSeq	NM_000706.3	ILMN_25328	AVPR1A	NM_000706.3	NM_000706.3		552	33149325	NM_000706.3	AVPR1A	NP_000697.1	ILMN_1712159	0005220176	S	3921	GGTGAGAGGAAATGTTGACTGGCCAAAAATATCTTTTTTCCCCCACTGCG	12	-	63540399-63540448	12q14.2a	Homo sapiens arginine vasopressin receptor 1A (AVPR1A), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10858434] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10858434] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8838314] [evidence TAS]	The regulation of blood pressure mediated by the signaling molecule vasopressin. Vasopressin is produced in the hypothalamus, and affects vasoconstriction, and renal water transport [goid 1992] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 8106369] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10858434] [evidence TAS]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 8106369] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 8106369] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8106369] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [pmid 10858434] [evidence TAS]; Interacting selectively with protein kinase C [goid 5080] [pmid 10858434] [evidence TAS]	AVPR1	AVPR1
Homo sapiens	RefSeq	XR_016155.2	ILMN_175167	LOC642413	XR_016155.2	XR_016155.2		642413	169188155	XR_016155.2	LOC642413		ILMN_3244550	0000270349	S	1223	AGGAGGAATTTATCTTCAATCTACCAGCCCCTGCTGTGTGGAATGCGCAC	10	-	81620011-81620060	10q22.3f	PREDICTED: Homo sapiens misc_RNA (LOC642413), miscRNA.					
Homo sapiens	RefSeq	XM_001723476.1	ILMN_348622	LOC100132979	XM_001723476.1	XM_001723476.1		100132979	169208494	XM_001723476.1	LOC100132979	XP_001723528.1	ILMN_3214985	0000290129	A	4320	CATTGCAGTCTTTTGCGATACCTCATTCAGCCAAGTATTGGTATTCTTCC	15	-	20254328-20254377	15q11.2b	PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a, 8A, transcript variant 1 (LOC100132979), mRNA.					
Homo sapiens	RefSeq	NM_033328.2	ILMN_17356	CAPZA3	NM_033328.2	NM_033328.2		93661	30581167	NM_033328.2	CAPZA3	NP_201585.1	ILMN_2069196	0004810403	S	922	TTCTACGAAGGGATCTTCCAGTGACCCGCACTCTTATTGACTGGCACAGG	12	+	18783233-18783282	12p12.3b	Homo sapiens capping protein (actin filament) muscle Z-line, alpha 3 (CAPZA3), mRNA.	A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	Gsg3; CAPPA3	CAPPA3; Gsg3
Homo sapiens	RefSeq	NM_080629.2	ILMN_162953	COL11A1	NM_080629.2	NM_080629.2		1301	98985809	NM_080629.2	COL11A1	NP_542196.2	ILMN_2286253	0006560192	I	1130	GGACAGTGGCTACTAAATCAAAGGAAAAATCCAAAAAGTTTACACCCCCC	1	-	103491427-103491476	1p21.1d-p21.1c	Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant B, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen heterotrimer containing type XI alpha chains in alpha1(XI)alpha2(XI)alpha3(XI) trimers; type XI collagen triple helices associate to form fibrils [goid 5592] [pmid 3182841] [evidence TAS]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [pmid 3182841] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 8872475] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [pmid 10486316] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 10486316] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 10486316] [evidence NAS]	STL2; CO11A1; COLL6	CO11A1; COLL6; STL2
Homo sapiens	RefSeq	NM_080629.2	ILMN_162953	COL11A1	NM_080629.2	NM_080629.2		1301	98985809	NM_080629.2	COL11A1	NP_542196.2	ILMN_2392803	0005560739	A	6415	TCTGGAAGACTTTTGGAAGCACACTCTGATCAACTCTTCTCTGCCGACAG	1	-	103343309-103343358	1p21.1d-p21.1c	Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant B, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen heterotrimer containing type XI alpha chains in alpha1(XI)alpha2(XI)alpha3(XI) trimers; type XI collagen triple helices associate to form fibrils [goid 5592] [pmid 3182841] [evidence TAS]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [pmid 3182841] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 8872475] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [pmid 10486316] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 10486316] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 10486316] [evidence NAS]	STL2; CO11A1; COLL6	CO11A1; COLL6; STL2
Homo sapiens	RefSeq	NM_001110514.1	ILMN_334163	EBF4	NM_001110514.1	NM_001110514.1		57593	160333410	NM_001110514.1	EBF4	NP_001103984.1	ILMN_3177727	0003710551	A	2425	TGGGGACCGTGGGAAAGAGGACAGCTCAGGGAGAAGTGACCTGGAAAGGT	20	+	2740268-2740317	20p13c	Homo sapiens early B-cell factor 4 (EBF4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	O/E-4; KIAA1442; COE4; RP5-860F19.3	O/E-4; KIAA1442; COE4; RP5-860F19.3
Homo sapiens	RefSeq	NM_014649.1	ILMN_14076	SAFB2	NM_014649.1	NM_014649.1		9667	7661935	NM_014649.1	SAFB2	NP_055464.1	ILMN_1705679	0002850091	S	2905	CTCGCTGTGAGTTTTCGGGTGGGCAGACGCACTGTTGAATCTGGTAGCCA	19	-	5538197-5538246	19p13.3b	Homo sapiens scaffold attachment factor B2 (SAFB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	KIAA0138	KIAA0138
Homo sapiens	Unigene	Hs.130555	ILMN_76997	HS.130555	Hs.130555		Hs.130555		13706715	BG185028			ILMN_1906681	0004230059	S	120	TGCAGCAGAAGGCAGCAGGAGGTGGTGACAAGAATACACGTCTGGCCCTA	20	+	41957227-41957276		RST3965 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_145170.2	ILMN_2757	TTC18	NM_145170.2	NM_145170.2		118491	40255086	NM_145170.2	TTC18	NP_660153.2	ILMN_1784516	0006760541	S	3249	CGGCTGGAGGAGCTCACAGAGGCTGAGGATGCTCTTTCTGAAGCCAATGC	10	-	74699432-74699479:74702692-74702693	10q22.2a	Homo sapiens tetratricopeptide repeat domain 18 (TTC18), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP11-152N13.6; FLJ25765	RP11-152N13.6; FLJ25765
Homo sapiens	RefSeq	XR_040854.1	ILMN_343352	LOC387745	XR_040854.1	XR_040854.1		387745	169202656	XR_040854.1	LOC387745		ILMN_3208980	0005130743	A	1005	CCTTCTCAATGGCCTCTCATTAGAGGCAGACATCTCTGCCAACTTAGACA				11p15.4d	PREDICTED: Homo sapiens misc_RNA (LOC387745), miscRNA.					
Homo sapiens	RefSeq	NM_153809.1	ILMN_24571	TAF1L	NM_153809.2	NM_153809.2		138474	142375765	NM_153809.2	TAF1L	NP_722516.1	ILMN_1799939	0002640762	S	6062	GAGCCCTCCTGCTGGGACAGAGAATTGGGTTCTAGTGGACTCTGCTACAC	9	-	32629556-32629605	9p21.1a	Homo sapiens TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like (TAF1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 12217962] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [pmid 12217962] [evidence IEP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [pmid 12217962] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 12217962] [evidence ISS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 12217962] [evidence IDA]; Interacting selectively with TATA-binding protein (TBP), a component of various transcription factors [goid 17025] [pmid 12217962] [evidence IPI]	TAF2A2; MGC134910	TAF2A2; MGC134910
Homo sapiens	Unigene	Hs.380575	ILMN_88766	HS.380575	Hs.380575		Hs.380575		22516729	BU075540			ILMN_1887553	0003610037	S	469	CCAGGCTGAGACCAGTAACAAATGGAGAAGTGTCCCATAGCAGAGAGGTG	3	+	37252619-37252668		in32g09.y1 Human Fetal Pancreas 1B Homo sapiens cDNA clone IMAGE: 5, mRNA sequence					
Homo sapiens	RefSeq	XM_376433.2	ILMN_165160	SPINK5L3	NM_001040129.2	NM_001040129.2		153218	124517650	NM_001040129.2	SPINK5L3	NP_001035218.1	ILMN_1697543	0003870661	A	213	GCAGACTGCCCCAATGTGACAGCACCTGTTTGTGCCTCAAATGGCCACAC	5	+	147641902-147641951	5q33.1a	Homo sapiens serine protease inhibitor Kazal-type 5-like 3 (SPINK5L3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	MGC149260; HBVDNAPTP1; HESPINTOR	
Homo sapiens	RefSeq	NM_199260.2	ILMN_11115	TPTE	NM_199260.2	NM_199260.2		7179	109689709	NM_199260.2	TPTE	NP_954869.1	ILMN_2329483	0005340398	A	1275	GGCACAGATAGAACAGGAACTATGGTTTGTGCCTTCCTTATTGCCTCTGA	21	-	10921952-10921995:10933852-10933857	21p11.2a-p11.1d	Homo sapiens transmembrane phosphatase with tensin homology (TPTE), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10598804] [evidence TAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 10598804] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10598804] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 10598804] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PTEN2	PTEN2
Homo sapiens	RefSeq	NM_001969.3	ILMN_172042	EIF5	NM_001969.3	NM_001969.3		1983	37537714	NM_001969.3	EIF5	NP_001960.2	ILMN_2318430	0002000398	A	5392	TGCCTGGCTGGGGCAGTAGGGGAAATTCCACCCAATTTTGCTATGAGCCT	14	+	102880716-102880765	14q32.32b	Homo sapiens eukaryotic translation initiation factor 5 (EIF5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8663286] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8663286] [evidence NAS]	Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 8663286] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 8663286] [evidence NAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8663286] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	EIF-5A	EIF-5A
Homo sapiens	RefSeq	NM_006214.2	ILMN_17762	PHYH	NM_001037537.1	NM_001037537.1		5264	83281446	NM_001037537.1	PHYH	NP_001032626.1	ILMN_1773073	0005860187	S	1660	GGGCATAGGAACGGTGTCATGGAGTCCAAATAAAGTGGATATTCCTGCTC	10	-	13359807-13359856	10p13d	Homo sapiens phytanoyl-CoA 2-hydroxylase (PHYH), transcript variant 2, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 8954107] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8954107] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9326940] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8954107] [evidence TAS]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of the reaction: phytanoyl-CoA + 2-oxoglutarate + O2 = 2-hydroxyphytanoyl-CoA + succinate + CO2 [goid 48244] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LN1; PAHX; LNAP1; PHYH1; RD	PAHX
Homo sapiens	RefSeq	NM_198989.2	ILMN_14063	DLEU7	NM_198989.2	NM_198989.2		220107	148747396	NM_198989.2	DLEU7	NP_945340.2	ILMN_3307752	0001190278	S	745	GGTCTCTGTGGATCTCTGACTTCTTATTACCTCCGATTGGAACGCGCCAC	13	-	51287144-51287193	13q14.3b	Homo sapiens deleted in lymphocytic leukemia, 7 (DLEU7), mRNA.				FLJ44882; MGC138214	FLJ44882; MGC138214
Homo sapiens	RefSeq	NM_012210.2	ILMN_14426	TRIM32	NM_012210.3	NM_012210.3		22954	153792581	NM_012210.3	TRIM32	NP_036342.2	ILMN_1654737	0005670088	S	2722	CCTCTCGCCTGGAGGATCTGTGCCATCTTGGATTGAGAATTGCAGATGTG	9	+	118502403-118502452	9q33.1b	Homo sapiens tripartite motif-containing 32 (TRIM32), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7778269] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 7778269] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LGMD2H; HT2A; TATIP; BBS11	LGMD2H; HT2A; TATIP
Homo sapiens	RefSeq	XM_938503.1	ILMN_167669	ANAPC1	XM_001129602.1	XM_001129602.1		64682	113413973	XM_001129602.1	ANAPC1	XP_001129602.1	ILMN_1664435	0000460609	A	1475	CGGAGCCAATTGTTCCTGAACTGTGTATTGACCATTTGTGGACAGAAACG				2q13c	PREDICTED: Homo sapiens anaphase promoting complex subunit 1 (ANAPC1), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]			
Homo sapiens	RefSeq	NM_130463.2	ILMN_18630	ATP6V1G2	NM_130463.2	NM_130463.2		534	20357536	NM_130463.2	ATP6V1G2	NP_569730.1	ILMN_1654541	0001260538	A	1209	CCTCACGTCCATCACTGGCTCTCTAATTCCACTTGTTCATTCTGTGACCC	6	-	31620553-31620602	6p21.33a	Homo sapiens ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2 (ATP6V1G2), transcript variant 1, mRNA.	A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence IEA]; Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence IEA]; Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	NG38; ATP6G2; VMA10; ATP6G	NG38; ATP6G2; VMA10; ATP6G
Homo sapiens	RefSeq	NM_130463.2	ILMN_18630	ATP6V1G2	NM_130463.2	NM_130463.2		534	20357536	NM_130463.2	ATP6V1G2	NP_569730.1	ILMN_1674778	0003780025	I	274	TCGGCCATAACAACAGAAATGGCCAGTCAGTCCCAAGGTATCCAGCAGCT	6	-	31622283-31622315:31622316-31622332	6p21.33a	Homo sapiens ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2 (ATP6V1G2), transcript variant 1, mRNA.	A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence IEA]; Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [evidence IEA]; Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	NG38; ATP6G2; VMA10; ATP6G	NG38; ATP6G2; VMA10; ATP6G
Homo sapiens	RefSeq	XM_001720647.1	ILMN_345789	LOC100132048	XM_001720647.1	XM_001720647.1		100132048	169172855	XM_001720647.1	LOC100132048	XP_001720699.1	ILMN_3244314	0006130010	S	584	GGCCAGTGAAACTCTGCCTGGTTCATTCGCACATCCGGAAGCCACTTCAC	8	-	7622961-7623010	8p23.1e	PREDICTED: Homo sapiens hypothetical protein LOC100132048 (LOC100132048), mRNA.					
Homo sapiens	RefSeq	XM_940885.1	ILMN_37890	KIAA1239	XM_940885.2	XM_940885.2		57495	113416069	XM_940885.2	KIAA1239	XP_945978.1	ILMN_1669276	0004730048	I	33	CTGTCCCCGAGACTCTGCGCTCCGGCGGGCGGCTTTCTCTGGGAACCTCA				4p14e	PREDICTED: Homo sapiens KIAA1239 (KIAA1239), mRNA.					
Homo sapiens	RefSeq	XM_940885.1	ILMN_37890	KIAA1239	XM_940885.2	XM_940885.2		57495	113416069	XM_940885.2	KIAA1239	XP_945978.1	ILMN_1695679	0006520377	A	7031	CAGGGAGGTGGTAGCCCAGAGAAGGCAAACCACATACAGATCACCTGGAG				4p14e	PREDICTED: Homo sapiens KIAA1239 (KIAA1239), mRNA.					
Homo sapiens	RefSeq	NM_024979.2	ILMN_8049	MCF2L	NM_024979.2	NM_024979.2		23263	27777654	NM_024979.2	MCF2L	NP_079255.2	ILMN_1736584	0001340736	S	3233	AGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGCATAGTTTCTT	13	+	112792318-112792367	13q34c	Homo sapiens MCF.2 cell line derived transforming sequence-like (MCF2L), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	OST; DBS; ARHGEF14; FLJ12122; KIAA0362	OST; DBS; ARHGEF14; FLJ12122; KIAA0362
Homo sapiens	RefSeq	NM_144567.3	ILMN_20781	ANGEL2	NM_144567.3	NM_144567.3		90806	70794817	NM_144567.3	ANGEL2	NP_653168.2	ILMN_1736340	0001820441	S	4292	GTTGACCAGAATAGTTGGTAACTCTGCCAGAGCCTGTACTTACCTGCCAA	1	-	213165831-213165880	1q32.3c	Homo sapiens angel homolog 2 (Drosophila) (ANGEL2), mRNA.				FLJ12793; KIAA0759L	FLJ12793; KIAA0759L
Homo sapiens	RefSeq	NM_004430.2	ILMN_165236	EGR3	NM_004430.2	NM_004430.2		1960	31317227	NM_004430.2	EGR3	NP_004421.2	ILMN_1724280	0002690626	I	97	ACCCAGCCTCATACCGCACCAGCTGAGGCACCCAAGAGGATTACCCCCTG	8	-	22606614-22606663	8p21.3a	Homo sapiens early growth response 3 (EGR3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9731539] [evidence TAS]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 9488654] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9731539] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1906159] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PILOT; MGC138484	PILOT; MGC138484
Homo sapiens	Unigene	Hs.539114	ILMN_104314	HS.539114	Hs.539114		Hs.539114		6086061	AW117477			ILMN_1853775	0006180672	S	430	GCCGGTTCTGTTCCACGTTGCACTGGATGTTCTAGCCGGTTCTGATCCAC	12	-	132069886-132069935		xd92c11.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2605076 3 similar to contains L1.t2 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_022466.2	ILMN_15905	IKZF5	NM_022466.3	NM_022466.3		64376	116812564	NM_022466.3	IKZF5	NP_071911.3	ILMN_1674024	0006480372	S	2246	CAGGTAAATACACTAGAGTGCTAGATGCCTTTTTCCCCTGTCAGTTTGAC				10q26.13b	Homo sapiens IKAROS family zinc finger 5 (Pegasus) (IKZF5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp781B0249; PEGASUS; ZNFN1A5; FLJ22973	DKFZp781B0249; PEGASUS; FLJ22973
Homo sapiens	RefSeq	NM_000933.2	ILMN_177768	PLCB4	NM_000933.2	NM_000933.2		5332	33469932	NM_000933.2	PLCB4	NP_000924.2	ILMN_2397294	0006280097	A	2829	CGGCTGCCCTGGCCTCTGGTGTGGAAGCCAAGAAAGGTATTGAACTTATC	20	+	9348492-9348541	20p12.2b	Homo sapiens phospholipase C, beta 4 (PLCB4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16767099] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PI-PLC; FLJ16169	PI-PLC; FLJ16169
Homo sapiens	RefSeq	XM_370611.4	ILMN_161930	LOC731640	XM_001133089.1	XM_001133089.1		731640	113422745	XM_001133089.1	LOC731640	XP_001133089.1	ILMN_1661174	0002260168	A	462	ACGGGAAGCAGCCTGAGCTGCTGGAACCTATTTCCTATGAATTCATGGCA					PREDICTED: Homo sapiens similar to 60S ribosomal protein L21, transcript variant 2 (LOC731640), mRNA.					
Homo sapiens	RefSeq	XM_001726973.1	ILMN_350174	LOC390557	XM_001726973.1	XM_001726973.1		390557	169208127	XM_001726973.1	LOC390557	XP_001727025.1	ILMN_3233930	0006270193	I	1466	TATAAAGTCGTAGGGGAGATGCCCGGCCCTGGGATGCTGTTTGGAGATGG	15	+	28125506-28125555	15q13.2a	PREDICTED: Homo sapiens hypothetical LOC390557 (LOC390557), mRNA.					
Homo sapiens	RefSeq	XM_001723111.1	ILMN_347107	LOC729020	XM_001723111.1	XM_001723111.1		729020	169201804	XM_001723111.1	LOC729020	XP_001723163.1	ILMN_3227136	0002600446	A	1434	GTATGGAAGTAATATTGGGTTGAATTCTGACTGCCCTTTTCTAGCTGGAC				10q24.33a	PREDICTED: Homo sapiens rcRPE (LOC729020), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-ribulose 5-phosphate = D-xylulose 5-phosphate [goid 4750] [evidence IEA]		
Homo sapiens	RefSeq	XM_944782.1	ILMN_37718	LOC649151	XM_944782.1	XM_944782.1		649151	88970851	XM_944782.1	LOC649151	XP_949875.1	ILMN_1696751	0007510471	I	339	TGGGAGCAACTGATGTTCGAGAAAGCCCAGGCTCCGGCAAGCCGTGGGTT					PREDICTED: Homo sapiens hypothetical protein LOC649151, transcript variant 1 (LOC649151), mRNA.					
Homo sapiens	RefSeq	NM_004493.2	ILMN_7095	HSD17B10	NM_004493.2	NM_004493.2		3028	91823611	NM_004493.2	HSD17B10	NP_004484.1	ILMN_2355971	0006100056	A	625	AGGTCTGTTTGGCACCCCACTGCTGACCAGCCTCCCAGAGAAAGTGTGCA	X	-	53475219-53475267:53475471-53475471	Xp11.22a	Homo sapiens hydroxysteroid (17-beta) dehydrogenase 10 (HSD17B10), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9338779] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9338779] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9338779] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+ [goid 3857] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9338779] [evidence IPI]; Catalysis of the reaction: 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholanate + NAD+ = 3-alpha,12-alpha-dihydroxy-7-oxo-5-beta-cholanate + NADH + H+ [goid 8709] [pmid 9338779] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NAD+ + 2-methyl-3-hydroxybutyryl-CoA = NADH + H+ + 2-methylaceto-acetyl-CoA [goid 47015] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	HCD2; ABAD; ERAB; MHBD; SCHAD; 17b-HSD10; HADH2	ABAD; MHBD; HSD17B10; 17b-HSD10; ERAB
Homo sapiens	RefSeq	NM_032301.1	ILMN_23561	FBXW9	NM_032301.2	NM_032301.2		84261	124248557	NM_032301.2	FBXW9	NP_115677.2	ILMN_1750661	0004480348	S	1628	CCACCCAGGGGGCCGCTTCCCACTCTTGGGCCCTGGTTTTGTTATGATTT	19	-	12799789-12799838	19p13.13c	Homo sapiens F-box and WD repeat domain containing 9 (FBXW9), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		MGC10870; Fbw9	MGC10870; Fbw9
Homo sapiens	RefSeq	XM_926350.1	ILMN_32014	LOC642965	XM_926350.1	XM_926350.1		642965	89034212	XM_926350.1	LOC642965	XP_931443.1	ILMN_1679085	0007210228	S	472	GCCTACTCCATGACAGACACTGTGCTAATTATTATCTTACTGATCCTCAC	11	-	93323232-93323281		PREDICTED: Homo sapiens hypothetical protein LOC642965 (LOC642965), mRNA.					
Homo sapiens	RefSeq	XM_928571.1	ILMN_37155	LOC645551	XM_928571.1	XM_928571.1		645551	89028129	XM_928571.1	LOC645551	XP_933664.1	ILMN_1712383	0000770010	S	1	ATGGATTGGTTCATGAAAGCAGATGATGATATATGTATATATATCACATT	8	-	62985469-62985518	8q12.3a	PREDICTED: Homo sapiens similar to core1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase (LOC645551), mRNA.					
Homo sapiens	RefSeq	NM_001003.2	ILMN_23181	RPLP1	NM_001003.2	NM_001003.2		6176	16905511	NM_001003.2	RPLP1	NP_000994.1	ILMN_2247594	0005290082	I	204	GGATAAGATCAATGCCCTCATTAAAGCAGCCGGTGTAAATGTTGAGCCTT	15	+	67533042-67533091	15q23a	Homo sapiens ribosomal protein, large, P1 (RPLP1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 3323886] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 3323886] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 3323886] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12054647] [evidence IPI]	P1; FLJ27448; RPP1; MGC5215	P1; FLJ27448; RPP1; MGC5215
Homo sapiens	RefSeq	NM_001003.2	ILMN_23181	RPLP1	NM_001003.2	NM_001003.2		6176	16905511	NM_001003.2	RPLP1	NP_000994.1	ILMN_1689725	0002690561	A	450	CATGGGCTTTGGTCTTTTTGACTAAACCTCTTTTATAACATGTTCAATAA	15	+	67534876-67534900:67534901-67534925	15q23a	Homo sapiens ribosomal protein, large, P1 (RPLP1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 3323886] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 3323886] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 3323886] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12054647] [evidence IPI]	P1; FLJ27448; RPP1; MGC5215	P1; FLJ27448; RPP1; MGC5215
Homo sapiens	RefSeq	XM_001127768.2	ILMN_163303	LOC648708	XM_001127768.2	XM_001127768.2		648708	169190476	XM_001127768.2	LOC648708	XP_001127768.2	ILMN_3279561	0006290259	M	342	GGGGCTCTTTGATGATGAGGACGAGGAGAGTGACCTCTTCACGGAAGCCC	10	-	45534795-45534817:45535291-45535317	10q11.21d	PREDICTED: Homo sapiens hypothetical LOC648708 (LOC648708), mRNA.					
Homo sapiens	RefSeq	XR_015328.2	ILMN_180695	LOC728105	XR_015328.2	XR_015328.2		728105	169165120	XR_015328.2	LOC728105		ILMN_3235006	0006040592	S	5128	GCCAGGCGTGATGGTGTGCACCTGTAGTCCTTGCTACTCAGAAAGCTGAG	3	+	199440770-199440819	3q29i	PREDICTED: Homo sapiens misc_RNA (LOC728105), miscRNA.					
Homo sapiens	RefSeq	XM_929963.1	ILMN_41685	PRO1768	XM_929963.1	XM_929963.1		29018	89037483	XM_929963.1	PRO1768	XP_935056.1	ILMN_1764243	0007400504	A	873	CATGCCAAGGAAAATGGCACGGAAGACCCACGTGTAGCCACAGCAGAGTC	14	+	89113191-89113240	14q32.11a	PREDICTED: Homo sapiens PRO1768 protein (PRO1768), mRNA.					
Homo sapiens	RefSeq	XM_926042.1	ILMN_174722	LOC650496	XR_018812.1	XR_018812.1		650496	113416368	XR_018812.1	LOC650496		ILMN_1653910	0001990113	S	528	AATTTGGTCAAAAAATGCTTAGAACTCTTTACTGAACTGGCAGAAGATAA					PREDICTED: Homo sapiens similar to Heat shock protein HSP 90-alpha (HSP 86) (NY-REN-38 antigen) (LOC650496), mRNA.					
Homo sapiens	RefSeq	NR_003015.1	ILMN_177440	SNORA53	NR_003015.1	NR_003015.1		677832	91982757	NR_003015.1	SNORA53		ILMN_3239932	0006960433	S	3	CATGCTTCCTTAGATCCACCTTTGTGGATGAATCTTGAACTGAGTTCCAC	12	+	97517546-97517595	12q23.1c	Homo sapiens small nucleolar RNA, H/ACA box 53 (SNORA53), small nucleolar RNA.				ACA53	ACA53
Homo sapiens	RefSeq	NM_033307.2	ILMN_7908	CASP4	NM_033307.2	NM_033307.2		837	73622125	NM_033307.2	CASP4	NP_150650.2	ILMN_1760227	0003180164	I	289	ATAAATTGGGTCACAGAGGCAGAAATCACAATTTATGTTCTGCAATATCC	11	-	104327947-104327996	11q22.3b	Homo sapiens caspase 4, apoptosis-related cysteine peptidase (CASP4), transcript variant delta, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 7797510] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 7743998] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ICE(rel)II; TX; Mih1/TX; ICH-2; ICEREL-II	ICE(rel)II; TX; Mih1/TX; ICH-2; ICEREL-II
Homo sapiens	RefSeq	XM_001718810.1	ILMN_351283	LOC100129979	XM_001718810.1	XM_001718810.1		100129979	169208151	XM_001718810.1	LOC100129979	XP_001718862.1	ILMN_3271858	0007000538	M	1119	CCCCTCCATTTGGTGCCTCAGAGAAACCTTGCACTCCATAGATCTGACTC	15	+	30564809-30564858	15q13.3c	PREDICTED: Homo sapiens similar to FLJ00287 protein (LOC100129979), mRNA.					
Homo sapiens	RefSeq	XM_942916.1	ILMN_137824	CRSP2	XM_942916.1	XM_942916.1		9282	89060695	XM_942916.1	CRSP2	XP_948009.1	ILMN_1770088	0002350349	I	55	GCAGTGTTGCCAGCAGCTGATGCTCAATGCTGTAGGTGCCTTTGTTTTGG				Xp11.4b	PREDICTED: Homo sapiens cofactor required for Sp1 transcriptional activation, subunit 2, 150kDa, transcript variant 5 (CRSP2), mRNA.					
Homo sapiens	RefSeq	NM_002725.3	ILMN_17858	PRELP	NM_002725.3	NM_002725.3		5549	41349452	NM_002725.3	PRELP	NP_002716.1	ILMN_1707380	0006650128	A	5155	GGGAAGGTTGGTTGCAAAAGTGGGATTCATGACCCTCCCAGGCTACACCA	1	+	201726438-201726487	1q32.1e	Homo sapiens proline/arginine-rich end leucine-rich repeat protein (PRELP), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 7592739] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 7592739] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 7592739] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MSTP161; SLRR2A; MST161; MGC45323	MSTP161; SLRR2A; MST161; MGC45323
Homo sapiens	RefSeq	NR_024394.1	ILMN_370245	LOC154822	NR_024394.1	NR_024394.1		154822	211971087	NR_024394.1	LOC154822		ILMN_3237689	0007380541	S	3911	CAGGCTATGTAGAGCCCTGAATCTCAAAGGGAGAGCTTGGTCCCAGCAGG	7	+	158818827-158818876		Homo sapiens hypothetical LOC154822 (LOC154822), non-coding RNA.					
Homo sapiens	RefSeq	NM_176881.1	ILMN_24652	TAS2R39	NM_176881.2	NM_176881.2		259285	116875818	NM_176881.2	TAS2R39	NP_795362.2	ILMN_1759475	0000770246	S	615	TGTGGTCGGTCTGGCTTTTTTCTTTAACCTGGGGATTGTGACTCCTCTGA	7	+	142591248-142591297	7q34f	Homo sapiens taste receptor, type 2, member 39 (TAS2R39), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]		
Homo sapiens	RefSeq	XM_941762.1	ILMN_168135	SETD1B	XM_037523.12	XM_037523.12		23067	113423508	XM_037523.12	SETD1B	XP_037523.11	ILMN_1813573	0004780669	A	8171	CCCTCTCCCCAGGAGCCCCAGCCCCAGAGTGGTTTGCAATAATCAAGATA	12	+	120754585-120754634	12q24.31b	PREDICTED: Homo sapiens SET domain containing 1B (SETD1B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]		
Homo sapiens	RefSeq	NM_001144.3	ILMN_22219	AMFR	NM_001144.4	NM_001144.4		267	85815824	NM_001144.4	AMFR	NP_001135.3	ILMN_1666258	0004610594	I	1414	GGTTCCTGTAGCAGCAGCCGAAGGGAGACCTCGCTTAAACCAACACAATC	16	-	56423114-56423163	16q13a	Homo sapiens autocrine motility factor receptor (AMFR), mRNA.	Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [pmid 17681147] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 11724934] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1649192] [evidence NAS]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 17310145] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 16168377] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 17043353] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 11724934] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 16168377] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [pmid 17157811] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [pmid 17310145] [evidence IDA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 1649192] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1649192] [evidence TAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 16168377] [evidence IMP]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 17681147] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11724934] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 17043353] [evidence IMP]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10456327] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11724934] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17681147] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11724934] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17681147] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16168377] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1649192] [evidence IPI]	GP78; RNF45	GP78; RNF45
Homo sapiens	RefSeq	NM_138958.1	ILMN_22219	AMFR	NM_001144.4	NM_001144.4		267	85815824	NM_001144.4	AMFR	NP_001135.3	ILMN_1723116	0001400672	A	3131	GGTGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAA	16	-	56395777-56395826	16q13a	Homo sapiens autocrine motility factor receptor (AMFR), mRNA.	Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [pmid 17681147] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 11724934] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1649192] [evidence NAS]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 17310145] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 16168377] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 17043353] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 11724934] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 16168377] [evidence IMP]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [pmid 17157811] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [pmid 17310145] [evidence IDA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 1649192] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1649192] [evidence TAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 16168377] [evidence IMP]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 17681147] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11724934] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 17043353] [evidence IMP]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10456327] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11724934] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17681147] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11724934] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17681147] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16168377] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1649192] [evidence IPI]	GP78; RNF45	GP78; RNF45
Homo sapiens	Unigene	Hs.369643	ILMN_87950	HS.369643	Hs.369643		Hs.369643		34530644	AK124771			ILMN_1817275	0001450577	S	3187	ACCCAGGCACCAGGCCAGATCCCACAGAACCAGTCTCCAGACCCATCCTT	10	+	112696990-112697039		Homo sapiens cDNA FLJ42781 fis, clone BRAWH3005534					
Homo sapiens	RefSeq	NM_024753.3	ILMN_24489	TTC21B	NM_024753.3	NM_024753.3		79809	116089291	NM_024753.3	TTC21B	NP_079029.3	ILMN_2217955	0006520482	S	4585	CCTGCTTCAGCCTCCCGAGTAGCTGGGACTAAAGGCATGTGCCATCACAC	2	-	166730714-166730763	2q24.3c-q24.3d	Homo sapiens tetratricopeptide repeat domain 21B (TTC21B), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Nbla10696; FLJ11457	Nbla10696; FLJ11457
Homo sapiens	RefSeq	NM_004439.4	ILMN_1494	EPHA5	NM_004439.4	NM_004439.4		2044	56119208	NM_004439.4	EPHA5	NP_004430.3	ILMN_1668022	0005360408	A	3022	CAGTTCAATGGACGCTGTGGCTCAGGTGACCTTGGAGGATTTGAGACGGC	4	-	65872518-65872532:65880286-65880320	4q13.1f	Homo sapiens EPH receptor A5 (EPHA5), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5005] [pmid 7898931] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	EHK1; TYRO4; HEK7; CEK7	EHK1; TYRO4; HEK7; CEK7
Homo sapiens	RefSeq	NM_004439.4	ILMN_1494	EPHA5	NM_004439.4	NM_004439.4		2044	56119208	NM_004439.4	EPHA5	NP_004430.3	ILMN_1767342	0006960593	I	1855	CTGTGGGAGGGCTTCTTCCCTGTGCGCTGTTGCCCATCCAAGCCTAATAT	4	-	65925311-65925360	4q13.1f	Homo sapiens EPH receptor A5 (EPHA5), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5005] [pmid 7898931] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	EHK1; TYRO4; HEK7; CEK7	EHK1; TYRO4; HEK7; CEK7
Homo sapiens	RefSeq	NM_182500.1	ILMN_170815	C2ORF50	NM_182500.1	NM_182500.1		130813	32698836	NM_182500.1	C2orf50	NP_872306.1	ILMN_1768071	0001820487	S	2385	GCTGAAGAAGGGAGAGGACTTGGAGGATGCAGGGAAGAGAGGGGCACAAG	2	+	11203302-11203351	2p25.1b	Homo sapiens chromosome 2 open reading frame 50 (C2orf50), mRNA.				FLJ25143; MGC149401	FLJ25143; MGC149401
Homo sapiens	RefSeq	NM_022818.3	ILMN_29693	MAP1LC3B	NM_022818.3	NM_022818.3		81631	61676203	NM_022818.3	MAP1LC3B	NP_073729.1	ILMN_1703244	0002490754	S	1914	CGGGGAAAACCAGATTCTTTGCATCTGGGCCCTCTACTGATTGTTAAAGG	16	+	85995525-85995574	16q24.2a	Homo sapiens microtubule-associated protein 1 light chain 3 beta (MAP1LC3B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 12740394] [evidence ISS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; The lipid bilayer surrounding an organelle [goid 31090] [pmid 12740394] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15355958] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15187094] [evidence IPI]	MAP1A/1BLC3	MAP1A/1BLC3
Homo sapiens	RefSeq	NM_006213.3	ILMN_713	PHKG1	NM_006213.3	NM_006213.3		5260	94538351	NM_006213.3	PHKG1	NP_006204.1	ILMN_2113102	0003830056	S	1099	CGGGGGAAGTTCAAGGTGATCGCTCTGACCGTGCTGGCTTCAGTGCGGAT	7	-	56148957-56148992:56149323-56149336	7p11.2b	Homo sapiens phosphorylase kinase, gamma 1 (muscle) (PHKG1), mRNA.	An enzyme complex that catalyzes the phosphorylation of phosphorylase b to form phosphorylase a [goid 5964] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2297530] [evidence NAS]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: 4 ATP + 2 phosphorylase b = 4 ADP + phosphorylase a [goid 4689] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PHKG	PHKG
Homo sapiens	RefSeq	NM_015641.2	ILMN_17251	TES	NM_015641.2	NM_015641.2		26136	23238186	NM_015641.2	TES	NP_056456.1	ILMN_1746243	0002120402	I	154	GAGGAGGGGACCCATAGGACGCGTTAACATGGACCTGGAAAACAAAGTGA	7	+	115637970-115637997:115637998-115638019	7q31.2b	Homo sapiens testis derived transcript (3 LIM domains) (TES), transcript variant 1, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP586B2022; TESS-2; MGC1146; TESTIN; TESS	DKFZP586B2022; TESS-2; MGC1146; TESTIN; TESS
Homo sapiens	RefSeq	NM_183372.2	ILMN_10536	NBPF11	NM_183372.2	NM_183372.2		200030	41582235	NM_183372.2	NBPF11	NP_899228.2	ILMN_1662845	0006220561	S	281	CTGTGCCTTGGGCTCTCCTGACACGGCCCATCCGGACCCTGAGGAGCCAG	1	-	144793771-144793820	1q21.1c	Homo sapiens neuroblastoma breakpoint family, member 11 (NBPF11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			NBG	NBG
Homo sapiens	RefSeq	NM_172115.1	ILMN_19277	CAMK2D	NM_001221.2	NM_001221.2		817	26667179	NM_001221.2	CAMK2D	NP_001212.2	ILMN_1683415	0001110364	A	1828	GGAATGCCAAAGACAATGCAGTCAGAAGAGACTCGTGTGTGGCACCGCCG	4	-	114597999-114598048	4q26a	Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II delta (CAMK2D), transcript variant 3, mRNA.	An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [pmid 11264466] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 9060999] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC44911; CAMKD	MGC44911; CAMKD
Homo sapiens	RefSeq	NM_001221.2	ILMN_19277	CAMK2D	NM_001221.2	NM_001221.2		817	26667179	NM_001221.2	CAMK2D	NP_001212.2	ILMN_1658818	0006480050	I	1971	CTCAGGAGGCACCTCTTTGTGGCAAAACATCTAAGGCCTGAAAACCATTC	4	-	114596343-114596359:114596360-114596392	4q26a	Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II delta (CAMK2D), transcript variant 3, mRNA.	An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [pmid 11264466] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 9060999] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC44911; CAMKD	MGC44911; CAMKD
Homo sapiens	RefSeq	NM_014675.2	ILMN_163929	CROCC	NM_014675.3	NM_014675.3		9696	153791496	NM_014675.3	CROCC	NP_055490.3	ILMN_1799672	0000610424	S	6407	TTGTCTCTGGTCAGCCCTGGAGCATGGGATCGTGGGAAAGAGGAGGGGGA	1	+	17171812-17171861	1p36.13e	Homo sapiens ciliary rootlet coiled-coil, rootletin (CROCC), mRNA.	A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence ISS]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IEA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence ISS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51297] [pmid 16203858] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence ISS]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence ISS]	KIAA0445	KIAA0445
Homo sapiens	Unigene	Hs.134626	ILMN_77570	HS.134626	Hs.134626		Hs.134626		51472444	XM_373636			ILMN_1823034	0005340296	S	1911	CAGGGAAATATTCCGGTGGAGGTAAGCTCTGTCCTGTTCTCAGAGAGCCC					PREDICTED: Homo sapiens hypothetical LOC388140 (LOC388140), mRNA					
Homo sapiens	RefSeq	NM_020630.3	ILMN_2380	RET	NM_020630.4	NM_020630.4		5979	126273513	NM_020630.4	RET	NP_065681.1	ILMN_1655610	0000630327	I	3957	GGGAGGACGCACCCCCACTGCTGTTTTCACATCCTTTCCCTTACCCACCT	10	+	42942756-42942805	10q11.21a	Homo sapiens ret proto-oncogene (RET), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IEA]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7824936] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7824936] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure [goid 7497] [pmid 8114939] [evidence TAS]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IEA]; The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7824936] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RET51; CDHF12; RET-ELE1; HSCR1; MEN2A; PTC; MTC1; MEN2B	CDHF12; RET51; RET-ELE1; HSCR1; MEN2A; PTC; MEN2B; MTC1
Homo sapiens	RefSeq	NM_058181.1	ILMN_21121	C21ORF57	NM_058181.1	NM_058181.1		54059	54607071	NM_058181.1	C21orf57	NP_478061.1	ILMN_1656297	0002900403	I	823	GCAGAGTGGCAGCAGATGTTCCAGAAGGAGAAGGCGGTGCTGGACGAGCT	21	+	46540558-46540572:46541881-46541915	21q22.3f	Homo sapiens chromosome 21 open reading frame 57 (C21orf57), transcript variant 1, mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ46907	FLJ46907
Homo sapiens	RefSeq	NM_058181.1	ILMN_21121	C21ORF57	NM_058181.1	NM_058181.1		54059	54607071	NM_058181.1	C21orf57	NP_478061.1	ILMN_1795836	0006380187	A	456	GCGAGTCATCCCCATCAGGAGAGCGCCACTTCGCAGTAAGATCGAGATTG	21	+	46531282-46531331	21q22.3f	Homo sapiens chromosome 21 open reading frame 57 (C21orf57), transcript variant 1, mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ46907	FLJ46907
Homo sapiens	RefSeq	NM_058181.1	ILMN_21121	C21ORF57	NM_058181.1	NM_058181.1		54059	54607071	NM_058181.1	C21orf57	NP_478061.1	ILMN_2411127	0001110349	A	650	CAGGTGAATTTCCCCAGCCTGATTTTCCAGATGACTACAATTTGGGAGAC	21	+	46535686-46535735	21q22.3f	Homo sapiens chromosome 21 open reading frame 57 (C21orf57), transcript variant 1, mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ46907	FLJ46907
Homo sapiens	RefSeq	NM_052821.3	ILMN_27310	WDR5	NM_017588.2	NM_017588.2		11091	61744459	NM_017588.2	WDR5	NP_060058.1	ILMN_1728626	0004850079	A	2787	CCTGCCCCTCTGTTTCCGATGAGGTGTACGGATGAGTGACCTGCACTAAG	9	+	136014547-136014596	9q34.2b	Homo sapiens WD repeat domain 5 (WDR5), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12670868] [evidence IPI]	SWD3; BIG-3	SWD3; BIG-3
Homo sapiens	RefSeq	NM_017588.2	ILMN_27310	WDR5	NM_017588.2	NM_017588.2		11091	61744459	NM_017588.2	WDR5	NP_060058.1	ILMN_1737087	0003140044	I	14	CGCCCGAGCTGCCGCCTTGTCGAGCTGAGTCCGCGCTCCCGCCCAGGCGG	9	+	135991044-135991093	9q34.2b	Homo sapiens WD repeat domain 5 (WDR5), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12670868] [evidence IPI]	SWD3; BIG-3	SWD3; BIG-3
Homo sapiens	Unigene	Hs.116828	ILMN_75421	HS.116828	Hs.116828		Hs.116828		20487477	BQ277269			ILMN_1826285	0006040471	S	387	TGCTTCTCTAGGCCCCTGGTGCATTCAAAAACCTCCTGAAGGCCAGCGGA	8	-	140809790-140809839		AGENCOURT_6824128 NIH_MGC_127 Homo sapiens cDNA clone IMAGE:5810498 5, mRNA sequence					
Homo sapiens	RefSeq	XM_932922.1	ILMN_42124	LOC645478	XM_932922.2	XM_932922.2		645478	113426186	XM_932922.2	LOC645478	XP_938015.1	ILMN_1669901	0003870747	S	1	ATCTCGTATTTGAATTTGTGGCGCTTGGTGTCCGCGAGTTGCCGAATGAA	16	-	71256325-71256330:71256331-71256374	16q22.3b	PREDICTED: Homo sapiens hypothetical LOC645478 (LOC645478), mRNA.					
Homo sapiens	RefSeq	NM_000548.2	ILMN_178546	TSC2	NM_000548.3	NM_000548.3		7249	116256351	NM_000548.3	TSC2	NP_000539.2	ILMN_1762631	0003370497	I	2945	CTGAGGATAGCCAGACCCCCCAAACAAGGCTTGAATAACTCTCCACCCGT	16	+	2067601-2067650	16p13.3e	Homo sapiens tuberous sclerosis 2 (TSC2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16636147] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17114346] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16636147] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16636147] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9580671] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17114346] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 8806680] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10585443] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10585443] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15589136] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15314020] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A heterodimeric protein complex consisting of tumerin and hamartin; its formation may regulate hamartin homomultimer formation. The complex acts as a GTPase activating protein (GAP) for the small GTPase (Rheb), and inhibits the TOR signaling pathway [goid 33596] [pmid 9580671] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 8806680] [evidence IDA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence ISS]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14067] [evidence ISS]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence ISS]; Any process that activates or increases the activity of a GTPase [goid 43547] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of insulin receptor signaling [goid 46626] [evidence ISS]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence ISS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a higher concentration, in a concentration gradient of a specific chemical [goid 50918] [evidence ISS]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence ISS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9045618] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10585443] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12364343] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9580671] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10585443] [evidence IPI]	TSC4; LAM; FLJ43106	TSC4; uberin; LAM; TUBERIN
Homo sapiens	RefSeq	XM_937246.1	ILMN_36633	LOC648196	XM_937246.1	XM_937246.1		648196	89065640	XM_937246.1	LOC648196	XP_942339.1	ILMN_1682968	0000450575	S	212	AGAAGCAGCTGGACCCGCTCACCATCTACGGCATCCGGTGCCACTCTTGA					PREDICTED: Homo sapiens similar to BANP homolog (LOC648196), mRNA.					
Homo sapiens	RefSeq	XM_001720819.1	ILMN_335009	LOC728611	XM_001720819.1	XM_001720819.1		728611	169217781	XM_001720819.1	LOC728611	XP_001720871.1	ILMN_3297562	0003890564	M	459	TATGATGAAGGAGAAAGCACATATTTTGATGATCTTAAAGGAGAAATGCA				9q12g	PREDICTED: Homo sapiens similar to BMS1-like, ribosome assembly protein (yeast) (LOC728611), mRNA.					
Homo sapiens	RefSeq	XM_001720819.1	ILMN_335009	LOC728611	XM_001720819.1	XM_001720819.1		728611	169217781	XM_001720819.1	LOC728611	XP_001720871.1	ILMN_3221032	0004280411	A	456	GAATATGATGAAGGAGAAAGCACATATTTTGATGATCTTAAAGGAGAAAT				9q12g	PREDICTED: Homo sapiens similar to BMS1-like, ribosome assembly protein (yeast) (LOC728611), mRNA.					
Homo sapiens	RefSeq	XM_166160.7	ILMN_31386	C10ORF37	XM_166160.7	XM_166160.7		221017	89031340	XM_166160.7	C10orf37	XP_166160.6	ILMN_1747741	0003990762	A	1039	CAATGCAAGATGAGCTGGACCAAATGAGCATGGAGCACTAAGAACTACTC	10	+	71820170-71820210:71820211-71820219	10q22.1b	PREDICTED: Homo sapiens chromosome 10 open reading frame 37 (C10orf37), mRNA.					
Homo sapiens	RefSeq	XM_001723085.1	ILMN_345255	LOC100132229	XM_001723085.1	XM_001723085.1		100132229	169173208	XM_001723085.1	LOC100132229	XP_001723137.1	ILMN_3211028	0005340634	A	324	GTGTCTTATCTCTCGGAACACGGGCACCCCACAGAAGGTCCTGCCTCCTG				8p21.2a	PREDICTED: Homo sapiens similar to hCG2040398 (LOC100132229), mRNA.					
Homo sapiens	RefSeq	NM_019644.1	ILMN_183646	ANKRD7	NM_001077708.1	NM_001077708.1		56311	118150651	NM_001077708.1	ANKRD7	NP_001071176.1	ILMN_1779951	0004260653	S	937	CTGCATAGATACCCACAATTCACTGCGAGCCATGGAAAGAAGAAACATGC	7	+	117664213-117664216:117667199-117667244	7q31.31a	Homo sapiens ankyrin repeat domain 7 (ANKRD7), transcript variant 1, mRNA.		The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 8812458] [evidence TAS]		TSA806	TSA806
Homo sapiens	RefSeq	NM_001077708.1	ILMN_183646	ANKRD7	NM_001077708.1	NM_001077708.1		56311	118150651	NM_001077708.1	ANKRD7	NP_001071176.1	ILMN_2354930	0002370672	A	864	GCAAGGTGTGGAATTATGTTACGAAGGTATTGTGGATTCACAGCTGAGGA	7	+	117664140-117664189	7q31.31a	Homo sapiens ankyrin repeat domain 7 (ANKRD7), transcript variant 1, mRNA.		The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 8812458] [evidence TAS]		TSA806	TSA806
Homo sapiens	RefSeq	NM_014471.1	ILMN_13769	SPINK4	NM_014471.1	NM_014471.1		27290	7657452	NM_014471.1	SPINK4	NP_055286.1	ILMN_1681263	0005310368	S	172	GCGGCACTGATGGGCTCACATATACGAATGAATGCCAGCTCTGCTTGGCC	9	+	33236672-33236721	9p13.3e	Homo sapiens serine peptidase inhibitor, Kazal type 4 (SPINK4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	PEC-60; MGC133107	PEC-60; MGC133107
Homo sapiens	RefSeq	XM_931959.1	ILMN_306902	XAGE1E	NM_001097604.1	NM_001097604.1		653067	147903921	NM_001097604.1	XAGE1E	NP_001091073.1	ILMN_1678116	0006350458	I	9	GAAGGAGCATAGGACAGGGCAAGGCGGGATAAGGAGGGGCACCACAGCCC	X	+	52255707-52255756	Xp11.22b	Homo sapiens X antigen family, member 1E (XAGE1E), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_206933.1	ILMN_6977	USH2A	NM_206933.1	NM_206933.1		7399	46249405	NM_206933.1	USH2A	NP_996816.1	ILMN_2245241	0002350296	I	18289	CTCGCCTCTAGAGATTCTGATTCGGTTGATCTGGGGTGTGTGGCTGAGGC	1	-	213863403-213863452	1q41a-q41b	Homo sapiens Usher syndrome 2A (autosomal recessive, mild) (USH2A), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [pmid 12433396] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16434480] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10090909] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [pmid 10090909] [evidence IMP]; The process by which the identity of an organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 48496] [pmid 15671307] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 14676276] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 16434480] [evidence IPI]	dJ1111A8.1; US2; USH2; RP39	dJ1111A8.1; US2; USH2; RP39
Homo sapiens	RefSeq	NM_138812.1	ILMN_23963	DYDC1	NM_138812.2	NM_138812.2		143241	142375790	NM_138812.2	DYDC1	NP_620167.1	ILMN_1742203	0003930735	S	198	GGCCTGTTTAACTCAAGGTCTTGCAGAAGTGGCAAGAGTTCGCCCAGTGG	10	-	82112275-82112324	10q23.1a	Homo sapiens DPY30 domain containing 1 (DYDC1), mRNA.				bA36D19.5; DPY30D1; FLJ43920	bA36D19.5; DPY30D1; FLJ43920
Homo sapiens	RefSeq	XM_942547.1	ILMN_40240	LOC650771	XM_942547.1	XM_942547.1		650771	88947758	XM_942547.1	LOC650771	XP_947640.1	ILMN_1682601	0005360561	S	1	ATGGAGGCGACCTTGGAGCAGCGCATAGAAGATACAATGAAGAATCCCTC					PREDICTED: Homo sapiens similar to hepatitis B virus x-interacting protein (LOC650771), mRNA.					
Homo sapiens	RefSeq	XM_931515.1	ILMN_37549	TNRC9	XM_931515.1	XM_931515.1		27324	89040364	XM_931515.1	TNRC9	XP_936608.1	ILMN_1732808	0003170678	A	2918	GAGGCTTTAACGTAAACACTGGTGACATAAACCATTCATTGCTACGTTGC	16	-	51029619-51029668	16q12.1d	PREDICTED: Homo sapiens trinucleotide repeat containing 9, transcript variant 2 (TNRC9), mRNA.					
Homo sapiens	RefSeq	NM_004979.4	ILMN_4763	KCND1	NM_004979.4	NM_004979.4		3750	47078279	NM_004979.4	KCND1	NP_004970.3	ILMN_1668586	0004640411	S	4465	GGGGCTCCGGCCTGGGATGTTTCTGAACTTTGGGAGTTATAGGAGACAGG	X	-	48818844-48818893	Xp11.23c	Homo sapiens potassium voltage-gated channel, Shal-related subfamily, member 1 (KCND1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence NAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	KV4.1	KV4.1
Homo sapiens	RefSeq	NM_000062.2	ILMN_15074	SERPING1	NM_001032295.1	NM_001032295.1		710	73858569	NM_001032295.1	SERPING1	NP_001027466.1	ILMN_1670305	0002030309	A	1483	TGGGACCAGCAGCACAAGTTCCCTGTCTTCATGGGGCGAGTATATGACCC	11	+	57138571-57138620	11q12.1a	Homo sapiens serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 (SERPING1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3965505] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 3965505] [evidence EXP]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 2563376] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 2365061] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 1363816] [evidence TAS]	C1NH; HAE2; C1IN; HAE1; C1INH	C1NH; HAE2; C1IN; HAE1; C1INH
Homo sapiens	RefSeq	NM_002022.1	ILMN_1432	FMO4	NM_002022.1	NM_002022.1		2329	4503758	NM_002022.1	FMO4	NP_002013.1	ILMN_1677885	0000540544	S	1953	GCATCCCTCCTCTGCTCTCCATCATAACTGCTATTAGCCAAATTCAGGCC	1	+	169577661-169577710	1q24.3a	Homo sapiens flavin containing monooxygenase 4 (FMO4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [pmid 1417778] [evidence NAS]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]	FMO2	FMO2
Homo sapiens	RefSeq	NM_003317.3	ILMN_12176	NKX2-1	NM_003317.3	NM_003317.3		7080	31881814	NM_003317.3	NKX2-1	NP_003308.1	ILMN_1728117	0004060497	S	2016	CCTAGGCTCAGCGGCGACCGCCCTCCGCGAAAATAGTTTGTTTAATGTGA	14	-	36985874-36985923	14q13.3a	Homo sapiens NK2 homeobox 1 (NKX2-1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The formation of specific regional progenitor domains along the dorsal-ventral axis in the developing forebrain [goid 21798] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 7713914] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 7711080] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	BCH; NKX2.1; NK-2; TTF-1; TEBP; TITF1; BHC; NKX2A; TTF1	BCH; TEBP; TITF1; TTF1; NKX2.1; NK-2; TTF-1; BHC; NKX2A
Homo sapiens	RefSeq	XM_942376.1	ILMN_46024	LOC652745	XM_942376.1	XM_942376.1		652745	89077249	XM_942376.1	LOC652745	XP_947469.1	ILMN_1665819	0006480093	S	338	CTTATTACGGTCAACGGACTTACAATGCCCCTCCCACAGTGTTACAAGGC					PREDICTED: Homo sapiens similar to Ig kappa chain V-I region Walker precursor (LOC652745), mRNA.					
Homo sapiens	RefSeq	NM_001040102.1	ILMN_167138	OPALIN	NM_001040102.1	NM_001040102.1		93377	91932794	NM_001040102.1	OPALIN	NP_001035191.1	ILMN_2373236	0006110341	A	3112	CATGTCATGAAGGACCTTGGATTTACTGAGAACTCAGCCGTGGCCTTGGC	10	-	98103774-98103823	10q24.1a	Homo sapiens oligodendrocytic myelin paranodal and inner loop protein (OPALIN), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11256614] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TMP10; HTMP10	TMP10; HTMP10
Homo sapiens	Unigene	Hs.552934	ILMN_111170	HS.552934	Hs.552934		Hs.552934		18990938	BM681042			ILMN_1856851	0004610368	S	121	CTACAGACACCAGAGGATGCTGGGGACTTTTCAGGGGGTCTGCAAGACTG	14	+	86680271-86680320		UI-E-EJ0-ail-c-09-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ail-c-09-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_018045.4	ILMN_19084	BSDC1	NM_018045.5	NM_018045.5		55108	141802627	NM_018045.5	BSDC1	NP_060515.2	ILMN_1734483	0003370450	S	4298	CCAATGAGTGAAAGGGATCGTGGGTCAGGGACACCGAGAGAGTGAGGTCA	1	-	32603610-32603659	1p35.1b	Homo sapiens BSD domain containing 1 (BSDC1), mRNA.				RP4-811H24.7; FLJ10276; DKFZp686B09139	RP4-811H24.7; FLJ10276; DKFZp686B09139
Homo sapiens	RefSeq	XM_928149.1	ILMN_44670	LOC645118	XM_928149.1	XM_928149.1		645118	88997799	XM_928149.1	LOC645118	XP_933242.1	ILMN_1725233	0004180546	S	246	CAGTCGACAAGCACACAAAATGAGTGGATTCTCTGGGGGCAGCGTATGGC	6	+	134064685-134064734	1p36.11a,19p12c	PREDICTED: Homo sapiens similar to microtubule associated serine/threonine kinase 2 (LOC645118), mRNA.					
Homo sapiens	RefSeq	NM_012282.2	ILMN_11700	KCNE1L	NM_012282.2	NM_012282.2		23630	27436975	NM_012282.2	KCNE1L	NP_036414.1	ILMN_1711650	0002260468	S	1227	TCTTGCCTCCCCAGTTTTCATCCCAGTGGTAACGCCTGATTTTTGGTAGC	X	-	108867117-108867166	Xq22.3c	Homo sapiens KCNE1-like (KCNE1L), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 10493825] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 10493825] [evidence TAS]		KCNE5	KCNE5
Homo sapiens	RefSeq	NM_133329.4	ILMN_167899	KCNG3	NM_133329.4	NM_133329.4		170850	27436991	NM_133329.4	KCNG3	NP_579875.1	ILMN_2377957	0003870753	A	3743	GGATTAAAGCTTTGTGGTTCATGCAAACAATGTGCAGATGATAGCACCTC	2	-	42669188-42669237	2p21f	Homo sapiens potassium voltage-gated channel, subfamily G, member 3 (KCNG3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12060745] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12060745] [evidence IDA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11852086] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KV6.3; KV10.1	KV6.3; KV10.1
Homo sapiens	RefSeq	NM_199354.1	ILMN_5851	PRB1	NM_199354.1	NM_199354.1		5542	41349485	NM_199354.1	PRB1	NP_955386.1	ILMN_1740017	0001660358	A	322	AAAACCACAAGGACCACCCCCACAAGGAGGAAAGCCACAAGGACCACCCG	12	-	11397510-11397531:11397991-11398018	12p13.2b	Homo sapiens proline-rich protein BstNI subfamily 1 (PRB1), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Ps 1; PMF; PRB1L; Ps 2; PM; PMS; PRB1M	Ps 1; PMF; PRB1L; Ps 2; PM; PMS; PRB1M
Homo sapiens	RefSeq	XR_036960.1	ILMN_350017	LOC100129915	XR_036960.1	XR_036960.1		100129915	169202858	XR_036960.1	LOC100129915		ILMN_3270315	0000940196	M	1444	GGAGGCAGCTCAAGCTGTTGACTTCAATGTGGGGGCACTCAGCTAAGGCC				11q11c	PREDICTED: Homo sapiens misc_RNA (LOC100129915), miscRNA.					
Homo sapiens	RefSeq	NM_000391.2	ILMN_19883	TPP1	NM_000391.3	NM_000391.3		1200	118582287	NM_000391.3	TPP1	NP_000382.3	ILMN_1729234	0000670113	S	3286	CAGTGCTTGGCACCTGGAAGTAGGTGGCAGATGTTAACGCCCTTCCTCCC	11	-	6634194-6634243	11p15.4c	Homo sapiens tripeptidyl peptidase I (TPP1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 12134079] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 15317752] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 9295267] [evidence IMP]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10965052] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9295267] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9295267] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9295267] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 10740217] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another [goid 43171] [pmid 15158442] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another [goid 43171] [pmid 9989590] [evidence IMP]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [pmid 8215436] [evidence IMP]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12134079] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 9295267] [evidence IMP]; Catalysis of the release of an N-terminal tripeptide from a polypeptide [goid 8240] [pmid 11054422] [evidence IDA]; Catalysis of the release of an N-terminal tripeptide from a polypeptide [goid 8240] [pmid 10679303] [evidence IMP]; Catalysis of the release of an N-terminal tripeptide from a polypeptide [goid 8240] [pmid 10617131] [evidence IMP]; Catalysis of the release of an N-terminal tripeptide from a polypeptide [goid 8240] [pmid 12134079] [evidence IDA]; Catalysis of the release of an N-terminal tripeptide from a polypeptide [goid 8240] [pmid 14609438] [evidence ISS]; Catalysis of the release of an N-terminal tripeptide from a polypeptide [goid 8240] [pmid 10965052] [evidence IDA]	MGC21297; LPIC; TPP I; GIG1; CLN2	LINCL; TPP I; TPP-I; GIG1; CLN2
Homo sapiens	RefSeq	XM_927972.1	ILMN_33261	LOC644887	XM_927972.1	XM_927972.1		644887	89033793	XM_927972.1	LOC644887	XP_933065.1	ILMN_1653786	0003520379	S	181	AAGTGGAGAACCTTTCCCACCTGTAGAAAGCCAGAGAGCTGGCACCTGAG	11	+	11939504-11939553		PREDICTED: Homo sapiens hypothetical protein LOC644887 (LOC644887), mRNA.					
Homo sapiens	RefSeq	XR_017072.2	ILMN_168316	LOC401817	XR_017072.2	XR_017072.2		401817	169208199	XR_017072.2	LOC401817		ILMN_3274586	0003610598	M	394	GATGGAATGCTGTGCTCCCTGGTGCTGACAAGAAAGCCGATGCTGGGAGT	15	+	58484336-58484385	15q22.2a	PREDICTED: Homo sapiens misc_RNA (LOC401817), miscRNA.					
Homo sapiens	RefSeq	XM_931453.1	ILMN_34447	LOC643273	XM_931453.1	XM_931453.1		643273	88983743	XM_931453.1	LOC643273	XP_936546.1	ILMN_1732098	0004060601	S	606	GAGCTGGTCCCGCCCAGCACAAAGCTTTAAAGCTGCTAAGGCTCCAGGAT	5	-	60956579-60956628		PREDICTED: Homo sapiens hypothetical protein LOC643273 (LOC643273), mRNA.					
Homo sapiens	RefSeq	NM_032041.2	ILMN_13197	NCALD	NM_032041.2	NM_032041.2		83988	98985777	NM_032041.2	NCALD	NP_114430.2	ILMN_2266184	0006860521	I	233	CCACACAGTCAAAGGCTTGTGAGAATCTGGTGGATGCTGGACCTTGCTGC	8	-	102872333-102872382	8q22.3b	Homo sapiens neurocalcin delta (NCALD), transcript variant 8, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11964161] [evidence NAS]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [pmid 11964161] [evidence NAS]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 11964161] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11964161] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of tubulin, including microtubules [goid 15631] [pmid 11964161] [evidence IDA]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [pmid 11964161] [evidence IDA]	MGC33870; MGC74858	MGC74858
Homo sapiens	RefSeq	XM_940357.1	ILMN_162037	ZNF519	XM_001133760.1	XM_001133760.1		162655	113427871	XM_001133760.1	ZNF519	XP_001133760.1	ILMN_1786665	0006760612	I	1904	CCCCACTGTGGTTGATTATTGCTGTCTCTGACATGAGAGTCCCTTCTACG				18p11.21b	PREDICTED: Homo sapiens zinc finger protein 519 (ZNF519), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_940357.1	ILMN_162037	ZNF519	XM_001133760.1	XM_001133760.1		162655	113427871	XM_001133760.1	ZNF519	XP_001133760.1	ILMN_1724054	0003450239	A	1527	CCCTGCAAGTGTAAAGAATGTGCTAAAACCCTAAACTGGTGCTCACACCT				18p11.21b	PREDICTED: Homo sapiens zinc finger protein 519 (ZNF519), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_170601.3	ILMN_10502	SIAE	NM_170601.3	NM_170601.3		54414	47458051	NM_170601.3	SIAE	NP_733746.1	ILMN_1743412	0000630497	S	1606	GTAGTGCCCTGCCAGCCCCTCCCTTCATTGCTTTCATTACAGACCAGGGT	11	-	124506876-124506925	11q24.2a	Homo sapiens sialic acid acetylesterase (SIAE), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]		Catalysis of the reaction: N-acetyl-O-acetylneuraminate (free or glycosidically bound) + H2O = N-acetylneuraminate + acetate [goid 1681] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LSE; CSE-C; YSG2; MGC87009	LSE; CSE-C; YSG2; MGC87009
Homo sapiens	RefSeq	XM_001718200.1	ILMN_350545	LOC100133005	XM_001718200.1	XM_001718200.1		100133005	169171198	XM_001718200.1	LOC100133005	XP_001718252.1	ILMN_3247816	0007400097	S	72	GGGCGGCTGCCGGGAGAAGGTGGGCAGCTGGAGTGGGACTGGGGGAGACA	7	-	102118181-102118230	7q22.1f	PREDICTED: Homo sapiens similar to RAS p21 protein activator 4 (LOC100133005), mRNA.					
Homo sapiens	RefSeq	NM_002878.2	ILMN_4425	RAD51L3	NM_002878.2	NM_002878.2		5892	19924118	NM_002878.2	RAD51L3	NP_002869.2	ILMN_2273921	0007570577	I	677	CTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAAAACCCAGGATGA	17	-	30458129-30458178	17q12a	Homo sapiens RAD51-like 3 (S. cerevisiae) (RAD51L3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9570954] [evidence TAS]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9570954] [evidence TAS]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9570954] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]	R51H3; Trad; HsTRAD; RAD51D	R51H3; Trad; HsTRAD; RAD51D
Homo sapiens	RefSeq	NM_002878.2	ILMN_4425	RAD51L3	NM_002878.2	NM_002878.2		5892	19924118	NM_002878.2	RAD51L3	NP_002869.2	ILMN_2370907	0003890347	A	1499	TTTCTGGTGGAAACCAAGTTCACCCTGGCTGGGAGCATCTCTGATGAGGC	17	-	30451779-30451828	17q12a	Homo sapiens RAD51-like 3 (S. cerevisiae) (RAD51L3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9570954] [evidence TAS]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9570954] [evidence TAS]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9570954] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]	R51H3; Trad; HsTRAD; RAD51D	R51H3; Trad; HsTRAD; RAD51D
Homo sapiens	RefSeq	NM_002878.2	ILMN_4425	RAD51L3	NM_002878.2	NM_002878.2		5892	19924118	NM_002878.2	RAD51L3	NP_002869.2	ILMN_2370910	0007610450	A	1309	GCCTGCTGTTTACTGCCACCTGGCACTGGTGACTACAGACGTTCTCAGGC	17	-	30451969-30452018	17q12a	Homo sapiens RAD51-like 3 (S. cerevisiae) (RAD51L3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9570954] [evidence TAS]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9570954] [evidence TAS]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9570954] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]	R51H3; Trad; HsTRAD; RAD51D	R51H3; Trad; HsTRAD; RAD51D
Homo sapiens	Unigene	Hs.157771	ILMN_79436	HS.157771	Hs.157771		Hs.157771		5678277	AI939488			ILMN_1882849	0001050484	S	483	TTGGGGAAGGGCTGGAAAGGGGCAAGGTTTGGTCCTCATAAGGCTGCTCC	5	+	10273023-10273072		qy03b03.x5 NCI_CGAP_Brn23 Homo sapiens cDNA clone IMAGE:2010893 3, mRNA sequence					
Homo sapiens	RefSeq	NM_007082.2	ILMN_12723	RABL2A	NM_007082.2	NM_007082.2		11159	7549818	NM_007082.2	RABL2A	NP_009013.1	ILMN_1666624	0005080129	A	832	CACAGCTGAGGGGCTGGGGCTAGGGGAATAGTTTGGACCTTGTGCCTCCT	2	+	114116172-114116176:114116177-114116192:114117237-114117265	2q14.1a	Homo sapiens RAB, member of RAS oncogene family-like 2A (RABL2A), transcript variant 2, mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10444334] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC117180	MGC117180
Homo sapiens	RefSeq	XM_498540.2	ILMN_40139	LOC440092	XM_498540.2	XM_498540.2		440092	89035442	XM_498540.2	LOC440092	XP_498540.2	ILMN_1709004	0002340086	A	2613	GGTCTCCTTACTGTTCCTCCCTGCCCTATTCCCATACCCAGTAAGTTTGG	12	+	28236854-28236903		PREDICTED: Homo sapiens hypothetical LOC440092 (LOC440092), mRNA.					
Homo sapiens	RefSeq	NM_001013635.3	ILMN_365769	C12ORF68	NM_001013635.3	NM_001013635.3		387856	197245385	NM_001013635.3	C12orf68	NP_001013657.3	ILMN_3245006	0000070050	S	2082	CCTCAGGGGCAGGGCTTGTGGCTCTGGTGTTAGGTTCAGGGGCTTCAGAC	12	+	48579447-48579496	12q13.11c	Homo sapiens chromosome 12 open reading frame 68 (C12orf68), mRNA.					
Homo sapiens	RefSeq	NM_032382.2	ILMN_21662	COG8	NM_032382.3	NM_032382.3		84342	142353945	NM_032382.3	COG8	NP_115758.2	ILMN_1725246	0002140070	S	1708	GCCCCTCGCCTTTATCCTGCCAAAGAGAGAGACGCTTTTCACCCTGGATG	16	-	67922382-67922431	16q22.1d	Homo sapiens component of oligomeric golgi complex 8 (COG8), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p) [goid 17119] [pmid 15047703] [evidence IDA]; A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p) [goid 17119] [pmid 11703943] [evidence NAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		FLJ22315; DOR1	FLJ22315; DOR1
Homo sapiens	RefSeq	NM_022786.1	ILMN_5909	ARV1	NM_022786.1	NM_022786.1		64801	12232478	NM_022786.1	ARV1	NP_073623.1	ILMN_1800935	0001500246	S	999	GGATACCCACCCCCACAAATGCACCCAAGAGACAAGCCATTTACATACAG	1	+	229202656-229202705	1q42.2a	Homo sapiens ARV1 homolog (S. cerevisiae) (ARV1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]			
Homo sapiens	RefSeq	NM_032899.4	ILMN_14524	FAM83A	NM_032899.4	NM_032899.4		84985	46255015	NM_032899.4	FAM83A	NP_116288.2	ILMN_2239774	0002510605	I	2509	CAGCCTGGTCACCTCCTGAGGAATAAATGCTGAACCTCACAAGCCCCATC	8	+	124220787-124220836	8q24.13b	Homo sapiens family with sequence similarity 83, member A (FAM83A), transcript variant 1, mRNA.				BJ-TSA-9; MGC14128	BJ-TSA-9; MGC14128
Homo sapiens	RefSeq	NM_207006.1	ILMN_14524	FAM83A	NM_032899.4	NM_032899.4		84985	46255015	NM_032899.4	FAM83A	NP_116288.2	ILMN_1752995	0000510082	A	1195	GAGGAGTTCCGCCACCTCTACGCCTCCTCCAAGCCTGTGATGGGCCTGAA	8	+	124219473-124219522	8q24.13b	Homo sapiens family with sequence similarity 83, member A (FAM83A), transcript variant 1, mRNA.				BJ-TSA-9; MGC14128	BJ-TSA-9; MGC14128
Homo sapiens	RefSeq	NM_005149.1	ILMN_2473	TBX19	NM_005149.1	NM_005149.1		9095	4827023	NM_005149.1	TBX19	NP_005140.1	ILMN_1783563	0007510255	S	2372	CCTGAAACCACTTCCCCAGCTTAGGTCCCTCTGTTATCCTGTTGGCCTCC	1	+	166549838-166549887	1q24.2a	Homo sapiens T-box 19 (TBX19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9888994] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9888994] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9888994] [evidence TAS]	TBS 19; FLJ26302; TPIT; FLJ34543; dJ747L4.1; TBS19	TBS 19; FLJ26302; TPIT; FLJ34543; dJ747L4.1; TBS19
Homo sapiens	RefSeq	NM_005149.1	ILMN_2473	TBX19	NM_005149.1	NM_005149.1		9095	4827023	NM_005149.1	TBX19	NP_005140.1	ILMN_2048119	0000630722	S	2507	CTCTTTTTTCCAGTTCACCTGTGCGAATCCGACCCACCTCCCAGAGCCTG	1	+	166549973-166550022	1q24.2a	Homo sapiens T-box 19 (TBX19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9888994] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9888994] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9888994] [evidence TAS]	TBS 19; FLJ26302; TPIT; FLJ34543; dJ747L4.1; TBS19	TBS 19; FLJ26302; TPIT; FLJ34543; dJ747L4.1; TBS19
Homo sapiens	RefSeq	NM_020170.3	ILMN_29505	NCLN	NM_020170.3	NM_020170.3		56926	52353964	NM_020170.3	NCLN	NP_064555.2	ILMN_3237632	0004290687	S	3665	TCTGGGGCTCAGGCTGGTGTGGGATGCAGCCGGCCGATGAGAAAATAAAG	19	+	3160505-3160554	19p13.3f	Homo sapiens nicalin homolog (zebrafish) (NCLN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]			
Homo sapiens	RefSeq	XM_927509.1	ILMN_165542	LOC389963	XR_016592.1	XR_016592.1		389963	113421479	XR_016592.1	LOC389963		ILMN_1667236	0004570706	S	1370	TGGTGGTGTCCTCACAGAGGGCCTGCGTGCAGATCCCCCACTCTCCTGGC	10	+	47487126-47487175	10q11.22b	PREDICTED: Homo sapiens similar to Sodium/hydrogen exchanger 3 (Na(+)/H(+) exchanger 3) (NHE-3) (Solute carrier family 9 member 3) (LOC389963), mRNA.					
Homo sapiens	RefSeq	XM_943208.1	ILMN_36367	LOC648138	XM_943208.1	XM_943208.1		648138	89030175	XM_943208.1	LOC648138	XP_948301.1	ILMN_1665733	0006480022	S	260	CCTTGCAGGCTCAGAGGTGCCAGCTCCCACTGCCTGGCTTCTCCCTGCTG					PREDICTED: Homo sapiens hypothetical protein LOC648138 (LOC648138), mRNA.					
Homo sapiens	RefSeq	XM_001722148.1	ILMN_338819	LOC100131081	XM_001722148.1	XM_001722148.1		100131081	169206905	XM_001722148.1	LOC100131081	XP_001722200.1	ILMN_3280359	0004010575	M	1279	TGAGGCCGAATCTCATCCTCTAGTCCCAAGCCTCTCCACTACCAGGGCTG	14	+	38805931-38805933:38805934-38805980	14q21.1b	PREDICTED: Homo sapiens hypothetical protein LOC100131081 (LOC100131081), mRNA.					
Homo sapiens	Unigene	Hs.516729	ILMN_99100	HS.516729	Hs.516729		Hs.516729		5631085	AI911349			ILMN_1858126	0001710619	S	372	GCTTCAACCTGATCCCTGTGTTCCTCTGTTCTGCTAGTGATGGCTGGGGC	2	+	224844907-224844956		wd16b02.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2328267 3, mRNA sequence					
Homo sapiens	RefSeq	NM_172098.1	ILMN_28895	EYA3	NM_001990.2	NM_001990.2		2140	26667242	NM_001990.2	EYA3	NP_001981.2	ILMN_1790562	0000290541	A	1592	GTGTGAATGTTCTGATCACTACCACCCAGCTGGTTCCAGCCCTGGCCAAG	1	-	28315109-28315158	1p35.3b	Homo sapiens eyes absent homolog 3 (Drosophila) (EYA3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9049631] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9020840] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	DKFZp686C132	DKFZp686C132
Homo sapiens	RefSeq	NM_001990.2	ILMN_28895	EYA3	NM_001990.2	NM_001990.2		2140	26667242	NM_001990.2	EYA3	NP_001981.2	ILMN_1728353	0003190441	I	1890	ACTGGAATGAGGAGCCTTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAG	1	-	28300924-28300973	1p35.3b	Homo sapiens eyes absent homolog 3 (Drosophila) (EYA3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9049631] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9020840] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	DKFZp686C132	DKFZp686C132
Homo sapiens	RefSeq	NR_024488.1	ILMN_370130	LOC100129637	NR_024488.1	NR_024488.1		100129637	213512953	NR_024488.1	LOC100129637		ILMN_3236732	0000940369	S	6481	GGCCGTTCTCGCCTTGGTTTTCTAGGTTGTGTTGCGGCAGGAGCTGACTG	16	-	87732156-87732205	16q24.2a	Homo sapiens hypothetical LOC100129637 (LOC100129637), non-coding RNA. XR_039552 XR_039796					
Homo sapiens	RefSeq	XM_060943.1	ILMN_36528	LOC128322	XM_938802.1	XM_938802.1		128322	88952305	XM_938802.1	LOC128322	XP_943895.1	ILMN_1747389	0004540209	S	331	GGCTTTTGCGCCAATGACATGTTCAGGTTTGCCCTGCACAATTTCGGCTG				1p13.2c	PREDICTED: Homo sapiens similar to nuclear transport factor 2 (LOC128322), mRNA.					
Homo sapiens	RefSeq	NM_182775.1	ILMN_16145	ALS2CL	NM_182775.1	NM_182775.1		259173	33359216	NM_182775.1	ALS2CL	NP_877576.1	ILMN_1690636	0004760487	I	97	CTGGCTTGGCCTCCAGATCTGCCCACCTTTCTGTCTCCGTCTTTCCAGGA	3	-	46718753-46718802	3p21.31h	Homo sapiens ALS2 C-terminal like (ALS2CL), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [pmid 17239822] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17239822] [evidence IPI]	MGC129698; DKFZp686P238; RN49018	MGC129698; RN49018; DKFZp686P238
Homo sapiens	RefSeq	XM_932823.1	ILMN_167195	LOC729193	XM_001129628.1	XM_001129628.1		729193	113429704	XM_001129628.1	LOC729193	XP_001129628.1	ILMN_1735229	0002340554	S	3935	TATGATGCGGAGGACGTCCTCCGGCTGCCCCTCGCTCTCCATGCAGAACA	X	-	6154348-6154397	Xp22.31f	PREDICTED: Homo sapiens hypothetical LOC729193 (LOC729193), mRNA.					
Homo sapiens	RefSeq	XM_928377.1	ILMN_167195	LOC729193	XM_001129628.1	XM_001129628.1		729193	113429704	XM_001129628.1	LOC729193	XP_001129628.1	ILMN_1663057	0002710097	S	3398	CGCTTCCGCAGGTCAGGCCACGCGGGTGCCAGCGCGGGCTGTGGGCGCCC	X	-	6154885-6154934	Xp22.31f	PREDICTED: Homo sapiens hypothetical LOC729193 (LOC729193), mRNA.					
Homo sapiens	RefSeq	NM_181332.1	ILMN_167195	LOC729193	XM_001129628.1	XM_001129628.1		729193	113429704	XM_001129628.1	LOC729193	XP_001129628.1	ILMN_1671542	0001990703	I	1677	GTTTCGGGTTCCCTAGAAAAATCTGGACGTGTAAAAAGAACTCTTAACGG	X	-	6156606-6156655	Xp22.31f	PREDICTED: Homo sapiens hypothetical LOC729193 (LOC729193), mRNA.					NLGN; HNLX; HLNX; AUTSX2; NLGN4; ASPGX2; KIAA1260; MGC22376
Homo sapiens	RefSeq	NR_002947.1	ILMN_175319	TCAM1	NR_002947.1	NR_002947.1		146771	90991700	NR_002947.1	TCAM1		ILMN_3239922	0004730039	S	3149	CTTCCCTGTCCTTGGGAAAGAGTATATTCACCCTCAGAGAAGGCGTGAGG	17	+	59295333-59295382	17q23.3b	Homo sapiens testicular cell adhesion molecule 1 homolog (mouse) (TCAM1), non-coding RNA.				TCAM1P	TCAM1P
Homo sapiens	RefSeq	NM_173165.1	ILMN_27680	NFATC3	NM_173165.1	NM_173165.1		4775	27886560	NM_173165.1	NFATC3	NP_775188.1	ILMN_2360028	0000010474	A	3152	CGGGCCAGGGGGGTCTTTCTGCACCTTCATCCTTAATATGTCACAGTTTG	16	+	66783015-66783064	16q22.1c	Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 (NFATC3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 7749981] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 7739550] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NFAT4; NFATX	NFAT4; NFATX
Homo sapiens	RefSeq	NM_024803.1	ILMN_13951	TUBAL3	NM_024803.1	NM_024803.1		79861	13376180	NM_024803.1	TUBAL3	NP_079079.1	ILMN_1670385	0005670202	S	1567	CTGGTACAAGTCAGCTCTGCTACCTGGGAGCCTTTGGAAGCTTAGAGTCC	10	-	5435285-5435334	10p15.1c	Homo sapiens tubulin, alpha-like 3 (TUBAL3), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC119347; MGC119349; FLJ21665	MGC119347; MGC119349; FLJ21665
Homo sapiens	Unigene	Hs.385619	ILMN_89073	HS.385619	Hs.385619		Hs.385619		23272441	BC032898			ILMN_1820643	0000520315	S	190	ATGGGCTGTGCGAGAGACACTGGTGTGGGCAGAGGACTCGGGAAACTGCA	4	-	820754-820803		Homo sapiens cDNA clone IMAGE:5260625					
Homo sapiens	Unigene	Hs.128068	ILMN_76550	HS.128068	Hs.128068		Hs.128068		27847509	BX107685			ILMN_1893858	0004830368	S	133	GATTTGTCAGCAGCCACACAAGCCAGCCAACGCAGCAGAGAACAGGGCTG	13	-	22642086-22642135		BX107685 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998D173955, mRNA sequence					
Homo sapiens	RefSeq	NM_031922.2	ILMN_829	REPS1	NM_031922.2	NM_031922.2		85021	39812393	NM_031922.2	REPS1	NP_114128.2	ILMN_2222768	0000360358	S	3453	CTCTCTGCAGCCGTCTACATTCTTCACAAATCATGTGGTACATTGAAGCC	6	-	139267358-139267407	6q24.1a	Homo sapiens RALBP1 associated Eps domain containing 1 (REPS1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RALBP1	RALBP1
Homo sapiens	RefSeq	NM_001045548.1	ILMN_176269	LOC441743	NM_001045548.1	NM_001045548.1		441743	113930684	NM_001045548.1	LOC441743	NP_001039013.1	ILMN_2110829	0000070286	S	10	CACAAGATGGCGCTGAAAGCAAAGAAGGAAGCTCCTGCCTCTCCTGAAGC					Homo sapiens similar to C367G8.3 (novel protein similar to RPL23A (60S ribosomal protein L23A)) (LOC441743), mRNA.				rjd10; c367G8.3; RPL2B; RPL23AL	rjd10; c367G8.3; RPL2B; RPL23AL
Homo sapiens	RefSeq	NM_152441.1	ILMN_26024	FBXL14	NM_152441.1	NM_152441.1		144699	22748930	NM_152441.1	FBXL14	NP_689654.1	ILMN_1767441	0002640608	S	1864	TCTGGATGACCTGCCTAGCAGTTTCCCCATGAGATAGAGGAATGTCTACG	12	-	1545617-1545666	12p13.33c-p13.33b	Homo sapiens F-box and leucine-rich repeat protein 14 (FBXL14), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC40195; Fbl14	MGC40195; Fbl14
Homo sapiens	RefSeq	XM_940969.1	ILMN_43180	LOC651751	XM_940969.1	XM_940969.1		651751	89062132	XM_940969.1	LOC651751	XP_946062.1	ILMN_1674228	0006660379	S	62	TGCTCTGGGTCCCAGGATCCAGTGGGGATGTTGTGATGACTCAGTCTCCA					PREDICTED: Homo sapiens similar to Ig kappa chain V-II region RPMI 6410 precursor (LOC651751), mRNA.					
Homo sapiens	RefSeq	NM_014353.4	ILMN_22043	RAB26	NM_014353.4	NM_014353.4		25837	46361977	NM_014353.4	RAB26	NP_055168.2	ILMN_1790317	0002600240	S	1389	GGAGGCTCTGGCTCAAACAGCAATAGGGTCTTCCTCACTGACCTTGGAGG	16	+	2143907-2143956	16p13.3d	Homo sapiens RAB26, member RAS oncogene family (RAB26), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Located in the plasma membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31226] [evidence ISS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence ISS]; Progression of the exocrine system over time, from its formation to a mature structure. The exocrine system is a system of hormones and glands, where the glands secrete straight to a target site via ducts or tubes. The human exocrine system includes the salivary glands, sweat glands and many glands of the digestive system [goid 35272] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 11043516] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	V46133	V46133
Homo sapiens	RefSeq	XM_001721784.1	ILMN_337612	LOC100128997	XM_001721784.1	XM_001721784.1		100128997	169215020	XM_001721784.1	LOC100128997	XP_001721836.1	ILMN_3256009	0004220685	M	3510	CTCATTCTGGCCCGGCTACACTCCATTCCCTGCATTACAAGTCAGCTGTC				20q13.12b	PREDICTED: Homo sapiens hypothetical protein LOC100128997 (LOC100128997), mRNA.					
Homo sapiens	RefSeq	NM_004455.1	ILMN_166434	EXTL1	NM_004455.2	NM_004455.2		2134	112382284	NM_004455.2	EXTL1	NP_004446.2	ILMN_1718783	0006560682	S	3798	AGAACAGCCCCATCTCTTTCGCCTGCACACTTGGAACTCAGCAAGAAGGG	1	+	26235325-26235374	1p36.11b	Homo sapiens exostoses (multiple)-like 1 (EXTL1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9037597] [evidence TAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence IEA]	MGC70794; EXTL	EXTL
Homo sapiens	RefSeq	XR_001529.1	ILMN_33434	TESSP1	XR_001529.1	XR_001529.1		360226	89040580	XR_001529.1	TESSP1		ILMN_1651230	0002940041	A	883	GTGATGTCCCACAGTACACCCAGGCCAAACCCCTCCCAGCTGTTGCTGCT				16p13.3d	PREDICTED: Homo sapiens testis serine protease 1 (TESSP1), misc RNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	XM_930922.1	ILMN_39541	LOC653082	XM_930922.1	XM_930922.1		653082	88982310	XM_930922.1	LOC653082	XP_936015.1	ILMN_1677301	0000160735	I	821	GTACTGGGAAATGGGAGCAAACAGCACTGGGAGATAGGAGTATACAGCAC	5	-	764741-764790	5p15.33e	PREDICTED: Homo sapiens similar to zinc finger, DHHC domain containing 11, transcript variant 2 (LOC653082), mRNA.					
Homo sapiens	RefSeq	NM_198175.1	ILMN_22180	NME1	NM_198175.1	NM_198175.1		4830	38045912	NM_198175.1	NME1	NP_937818.1	ILMN_1713875	0003060440	I	244	GGGCCAAGAGATGGTGCTACTGTCTACTTTAGGGATCGTCTTTCAAGGCG	17	+	46586724-46586733:46586734-46586773	17q21.33b	Homo sapiens non-metastatic cells 1, protein (NM23A) expressed in (NME1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16130169] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]	The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 1851158] [evidence TAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 16130169] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [pmid 17975005] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 16862176] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 11555662] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11555662] [evidence IC ]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [pmid 11555662] [evidence IDA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [pmid 12972261] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16814409] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17975005] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12972261] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 12972261] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NDPKA; NM23-H1; NDPK-A; NM23; AWD; GAAD	NDPKA; NM23-H1; NDPK-A; NM23; AWD; GAAD
Homo sapiens	Unigene	Hs.291319	ILMN_85013	HS.291319	Hs.291319		Hs.291319		50949744	CR627122			ILMN_1905548	0004070193	S	5006	CCCATAGTAATTTTCCTCCAAAATGCAATAGCTCATTCCCTCAACTGCAG	X	-	131333820-131333869		Homo sapiens mRNA; cDNA DKFZp779M2422 (from clone DKFZp779M2422)					
Homo sapiens	RefSeq	NM_014724.2	ILMN_42256	ZSCAN12	NM_001039643.1	NM_001039643.1		9753	88900484	NM_001039643.1	ZSCAN12	NP_001034732.1	ILMN_1786281	0001580722	S	3455	CACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGC	6	-	28455379-28455428	6p22.1b	Homo sapiens zinc finger and SCAN domain containing 12 (ZSCAN12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF305; ZNF29K1; KIAA0426; dJ29K1.2; ZNF96; ZFP96	KIAA0426; ZNF29K1; ZNF305; ZSCAN12; dJ29K1.2; ZFP96
Homo sapiens	RefSeq	XM_001714700.1	ILMN_338850	LOC100131646	XM_001714700.1	XM_001714700.1		100131646	169160848	XM_001714700.1	LOC100131646	XP_001714752.1	ILMN_3280382	0007050520	M	626	CTCTGGGGAGGAGAGGCTGGGAAGGGGCTGCGAGAGATGCTACTTAAGAA				1p21.2a	PREDICTED: Homo sapiens hypothetical protein LOC100131646 (LOC100131646), mRNA.					
Homo sapiens	RefSeq	NM_003383.3	ILMN_14681	VLDLR	NM_003383.3	NM_003383.3		7436	65301166	NM_003383.3	VLDLR	NP_003374.3	ILMN_1675092	0007000291	I	2683	AGATACGAACACAACAGAAATTTCAGCAACTAGTGGACTAGTTCCTGGAG	9	+	2636536-2636552:2637474-2637506	9p24.2b	Homo sapiens very low density lipoprotein receptor (VLDLR), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 15082773] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10380922] [evidence TAS]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10380922] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380922] [evidence TAS]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [pmid 7550352] [evidence TAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [pmid 10380922] [evidence TAS]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ35024; VLDLRCH	FLJ35024; VLDLRCH
Homo sapiens	RefSeq	XR_038051.1	ILMN_343503	LOC100128516	XR_038051.1	XR_038051.1		100128516	169203187	XR_038051.1	LOC100128516		ILMN_3262840	0004290739	M	128	CAGCTGGCTGCCTGGGTCTTCGCTGACCATGCTGTCCTGGGTGGCACTTT				11q24.1b	PREDICTED: Homo sapiens misc_RNA (LOC100128516), miscRNA.					
Homo sapiens	RefSeq	NM_173611.1	ILMN_10514	FAM98B	NM_173611.1	NM_173611.1		283742	27734702	NM_173611.1	FAM98B	NP_775882.1	ILMN_1763997	0002600300	S	1686	GGCATCACCAGTGTTTGCCTCTGTGCTTCCACTGTGGCTCAATCCTATGT	15	+	36561733-36561782	15q14d	Homo sapiens family with sequence similarity 98, member B (FAM98B), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ38426	FLJ38426
Homo sapiens	RefSeq	NM_004770.2	ILMN_13223	KCNB2	NM_004770.2	NM_004770.2		9312	27436973	NM_004770.2	KCNB2	NP_004761.2	ILMN_1668236	0006960739	S	3259	GCCCCAGAAATTCATTCCAACCCAGGAGACACAGGTTATTGTCCCACACG	8	+	73849094-73849143	8q13.3d-q21.11a	Homo sapiens potassium voltage-gated channel, Shab-related subfamily, member 2 (KCNB2), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 9612272] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 9612272] [evidence TAS]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [pmid 9612272] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 9612272] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KV2.2	KV2.2
Homo sapiens	RefSeq	XM_932054.1	ILMN_39932	LOC644224	XM_932054.1	XM_932054.1		644224	88953820	XM_932054.1	LOC644224	XP_937147.1	ILMN_1654369	0000840414	S	181	ACCTCCAGGCCGCTACCCGCCTCTGAGCTTGGGCCCCTGACCACCGCCTC	2	-	174913902-174913951	2q31.1f	PREDICTED: Homo sapiens hypothetical LOC644224 (LOC644224), mRNA.					
Homo sapiens	RefSeq	NM_173515.2	ILMN_25628	CNKSR3	NM_173515.2	NM_173515.2		154043	74316005	NM_173515.2	CNKSR3	NP_775786.2	ILMN_1748844	0005420731	S	2972	TGCATTTTGACCTGTTCAGTGTCTGTCTTCCAGCACGGTGTGTACACTTC	6	-	154769052-154769101	6q25.2c	Homo sapiens CNKSR family member 3 (CNKSR3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MAGI1; RP11-486M3.1; FLJ31349	MAGI1; RP11-486M3.1; FLJ31349
Homo sapiens	RefSeq	NM_001033016.1	ILMN_17955	LOC613206	NM_001033016.1	NM_001033016.1		613206	74136820	NM_001033016.1	LOC613206	NP_001028188.1	ILMN_1725157	0006350435	S	1455	ACGCACTCACCCCAACAACGCCACCAGACGCTCCGGGGTGCACACGCACA	9	-	126060421-126060470	9q33.3a	Homo sapiens myeloproliferative disease associated tumor antigen 5 (LOC613206), mRNA.					
Homo sapiens	RefSeq	NM_020336.1	ILMN_5115	RALGAPB	NM_020336.2	NM_020336.2		57148	82734234	NM_020336.2	RALGAPB	NP_065069.1	ILMN_1733115	0006660139	S	4521	GGGATGATTGTCAGCAGGCGAGCTCTTGGCTTTCTGGTGAGGCAGACTGT	20	+	36636328-36636355:36636831-36636852	20q11.23c	Homo sapiens Ral GTPase activating protein, beta subunit (non-catalytic) (RALGAPB), mRNA.				FLJ43928; DKFZp686N19168; FLJ43270; dJ1100H13.1; RP5-1100H13.1; DKFZp781M2411	DKFZp686N19168
Homo sapiens	RefSeq	NM_020394.3	ILMN_11705	ZNF695	NM_020394.3	NM_020394.3		57116	140560987	NM_020394.3	ZNF695	NP_065127.3	ILMN_3307683	0006100114	S	3163	GTGGGTAACATGGTGGAATAGTATCTCTAATGATCCCTTCTCCCAGTGGC	1	-	247148749-247148798	1q44d	Homo sapiens zinc finger protein 695 (ZNF695), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC61907; RP11-551G24.1; SBZF3	MGC61907; RP11-551G24.1; SBZF3
Homo sapiens	RefSeq	NM_005318.2	ILMN_139403	H1F0	NM_005318.2	NM_005318.2		3005	20336758	NM_005318.2	H1F0	NP_005309.1	ILMN_1757467	0000630278	S	2049	TCTAGGGCTAGTACTTAGTTTCACACCCGGGAGCTGGGAGAAAAAACCTG	22	+	36533168-36533217	22q13.1a	Homo sapiens H1 histone family, member 0 (H1F0), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H1FV; MGC5241; H10	H1FV; MGC5241; H10
Homo sapiens	RefSeq	NM_001080445.1	ILMN_172404	FLJ39061	NM_001080445.1	NM_001080445.1		165057	122937286	NM_001080445.1	FLJ39061	NP_001073914.1	ILMN_2378404	0004200468	A	2092	CACCTCACGATGTGGCCCCACCATTGGATCTTCTACCCCCGATTAAAGGA				2q33.1g	Homo sapiens hypothetical protein FLJ39061 (FLJ39061), mRNA.					
Homo sapiens	RefSeq	NM_003734.2	ILMN_17272	AOC3	NM_003734.2	NM_003734.2		8639	6806883	NM_003734.2	AOC3	NP_003725.1	ILMN_1782086	0006860309	S	3889	GATTACTTTTGGGAGGGGAACCAGTAGGTTGAGGACAGGAGAGGGAAGGG	17	+	38263530-38263579	17q21.31a	Homo sapiens amine oxidase, copper containing 3 (vascular adhesion protein 1) (AOC3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9653080] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 9653080] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9653080] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9653080] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9653080] [evidence IDA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [pmid 8972912] [evidence TAS]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [pmid 9653080] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [pmid 8972912] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [pmid 9653080] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9653080] [evidence TAS]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [pmid 9653080] [evidence IDA]	SSAO; HPAO; VAP-1; VAP1	VAP-1; VAP1; SSAO; HPAO
Homo sapiens	RefSeq	NM_153021.3	ILMN_27755	PLB1	NM_153021.3	NM_153021.3		151056	76096365	NM_153021.3	PLB1	NP_694566.3	ILMN_1736929	0003830470	S	4683	CAAGCCACGACCAACCAGAGCCCAAACTGCCTGCCACCACGAGCATATCC	2	+	28719682-28719731	2p23.2b	Homo sapiens phospholipase B1 (PLB1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Catalysis of the hydrolysis of a lipid or phospholipid [goid 16298] [evidence IEA]	PLB	PLB
Homo sapiens	RefSeq	NM_020393.2	ILMN_19828	PGLYRP4	NM_020393.2	NM_020393.2		57115	56550072	NM_020393.2	PGLYRP4	NP_065126.2	ILMN_1781389	0000730167	S	1545	TGGCAGCCCCCACCTCCCACCTATCACCCCTCACCCATAACTCAGGTCAA	1	-	153302835-153302884	1q21.3c	Homo sapiens peptidoglycan recognition protein 4 (PGLYRP4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11461926] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11461926] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [pmid 11461926] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 11461926] [evidence NAS]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [pmid 11461926] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides [goid 8745] [evidence IEA]; Combining with a peptidoglycan to initiate a change in cell activity [goid 16019] [pmid 11461926] [evidence IDA]	PGLYRPIbeta; SBBI67; PGRP-Ibeta; PGRPIB	PGLYRPIbeta; SBBI67; PGRP-Ibeta; PGRPIB
Homo sapiens	RefSeq	NM_138928.1	ILMN_22603	MOCS1	NM_005943.3	NM_005943.3		4337	116734662	NM_005943.3	MOCS1	NP_005934.2	ILMN_1798624	0006900343	A	2522	ATGGATCCCAACTTCTCCCCGGCAGCTCTGCCTCCCTAAGTCTGTGAAGC	6	-	39981603-39981652	6p21.2a	Homo sapiens molybdenum cofactor synthesis 1 (MOCS1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9731530] [evidence NAS]; A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits [goid 19008] [evidence IEA]; A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits [goid 19008] [evidence IEA]; A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits [goid 19008] [evidence IEA]; A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits [goid 19008] [evidence IEA]; A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits [goid 19008] [evidence IEA]	The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [pmid 9731530] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with molybdenum (Mo) ions [goid 30151] [pmid 9731530] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	MOCS1B; MIG11; MOCS1A; KIAA0381; MOCOD	MOCS1B; MIG11; MOCS1A; KIAA0381; MOCOD
Homo sapiens	RefSeq	XM_001725650.1	ILMN_345235	LOC100130758	XM_001725650.1	XM_001725650.1		100130758	169166011	XM_001725650.1	LOC100130758	XP_001725702.1	ILMN_3264828	0004070753	M	1	CTTTAGGCGTGGCGCATTCAGGTTCTCCTGGACCATAGTGGTAGTCGCTG				3q25.31b	PREDICTED: Homo sapiens similar to hCG2022166 (LOC100130758), mRNA.					
Homo sapiens	RefSeq	XM_001725650.1	ILMN_345235	LOC100130758	XM_001725650.1	XM_001725650.1		100130758	169166011	XM_001725650.1	LOC100130758	XP_001725702.1	ILMN_3188360	0004730300	A	678	CCTTTGGACATAAGAATGGATGGTGGCAGGAACATTTCCTCCCTCTGCTA				3q25.31b	PREDICTED: Homo sapiens similar to hCG2022166 (LOC100130758), mRNA.					
Homo sapiens	RefSeq	NM_178229.3	ILMN_25474	IQGAP3	NM_178229.3	NM_178229.3		128239	39753960	NM_178229.3	IQGAP3	NP_839943.2	ILMN_1695418	0004010242	S	5473	CTCCAACCTGGGCAGGGACTGGGGGGATGCAGTGTGTGTTAGTGCCCATG	1	-	154762350-154762399	1q22d-q23.1a	Homo sapiens IQ motif containing GTPase activating protein 3 (IQGAP3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Ras superfamily [goid 5099] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	MGC10831; MGC10170; MGC1947	MGC1947; MGC10831; MGC10170
Homo sapiens	RefSeq	NM_003511.2	ILMN_26381	HIST1H2AL	NM_003511.2	NM_003511.2		8332	15718717	NM_003511.2	HIST1H2AL	NP_003502.1	ILMN_3246993	0000020136	S	419	ATGTCTCCATAGAATCACTTTCCAATACAACGGCTCTTTTCAGAGCCACC	6	+	27833525-27833525:27833526-27833574	6p22.1c	Homo sapiens histone cluster 1, H2al (HIST1H2AL), mRNA.				dJ193B12.9; HIST1H2AM; H2A/i; H2A.i; H2AFI	dJ193B12.9; HIST1H2AM; H2A/i; H2A.i; H2AFI
Homo sapiens	RefSeq	NM_004567.2	ILMN_163968	PFKFB4	NM_004567.2	NM_004567.2		5210	19923257	NM_004567.2	PFKFB4	NP_004558.1	ILMN_1653292	0007400653	S	3372	GCTGGCGTGCCCATGTTGCAGATATTTTCCCGAGTTCCCCAGAATGGATG	3	-	48555580-48555629	3p21.31e	Homo sapiens 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 (PFKFB4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10095107] [evidence EXP]	The chemical reactions and pathways involving fructose 2,6-bisphosphate. The D enantiomer is an important regulator of the glycolytic and gluconeogenic pathways. It inhibits fructose 1,6-bisphosphatase and activates phosphofructokinase [goid 6003] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate [goid 3873] [pmid 10095107] [evidence NAS]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 2,6-bisphosphate [goid 3873] [pmid 10095107] [evidence EXP]; Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate [goid 4331] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NR_003610.1	ILMN_308308	PDXDC2	NR_003610.1	NR_003610.1		283970	153791676	NR_003610.1	PDXDC2		ILMN_3251217	0001400102	S	3994	GGCCGAGGCAGAAAAATCACTGAAACCCAAGAGGCAGAGGTTGAGTAAGC	16	-	70010340-70010389	16q22.1e	Homo sapiens pyridoxal-dependent decarboxylase domain containing 2 (PDXDC2), non-coding RNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	FLJ23482	FLJ23482
Homo sapiens	RefSeq	XM_934212.1	ILMN_308308	PDXDC2	NR_003610.1	NR_003610.1		283970	153791676	NR_003610.1	PDXDC2		ILMN_1780777	0001300356	I	84	GTCAGCGCTGCCAGCGTGGAAAGAGCTGCGGGGCGCGGGAGGAGGAAGTA	16	-	70099718-70099767	16q22.1e	Homo sapiens pyridoxal-dependent decarboxylase domain containing 2 (PDXDC2), non-coding RNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	FLJ23482	
Homo sapiens	RefSeq	XM_498469.2	ILMN_308308	PDXDC2	NR_003610.1	NR_003610.1		283970	153791676	NR_003610.1	PDXDC2		ILMN_1671820	0003710487	I	2194	GGAAGTCCTTGGATAATTATCATTATTGTGTTTCTGGGACGTTACAAATT	16	-	70020314-70020363	16q22.1e	Homo sapiens pyridoxal-dependent decarboxylase domain containing 2 (PDXDC2), non-coding RNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	FLJ23482	
Homo sapiens	RefSeq	NM_139319.1	ILMN_19859	SLC17A8	NM_139319.1	NM_139319.1		246213	21322233	NM_139319.1	SLC17A8	NP_647480.1	ILMN_1767842	0007160192	S	3633	ATCCATGCAAGCCCCATAAAACAGTTCCTAGCATGCAGAAAATGCCCACG	12	+	99339755-99339804	12q23.1d	Homo sapiens solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8 (SLC17A8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid [goid 5313] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	VGLUT3	VGLUT3
Homo sapiens	Unigene	Hs.444683	ILMN_92821	HS.444683	Hs.444683		Hs.444683		27880738	BX116997			ILMN_1854383	0002510349	S	336	CCTTGGGATATCCTTGTGGGTCAAGGAGGCAACTCTCCTCACGGATTCCC	7	+	30381492-30381541		BX116997 Soares_placenta_8to9weeks_2NbHP8to9W Homo sapiens cDNA clone IMAGp998G16558, mRNA sequence					
Homo sapiens	RefSeq	NM_207462.1	ILMN_7036	FLJ45684	NM_207462.1	NM_207462.1		400666	46409551	NM_207462.1	FLJ45684	NP_997345.1	ILMN_1701629	0001340286	S	2333	AGCAAGTGCCTCGGCCCAGTCTTCCTGTATTTATGTGGAAGGCGGCGGCT	19	-	595927-595976	19p13.3j	Homo sapiens FLJ45684 protein (FLJ45684), mRNA.					
Homo sapiens	RefSeq	XM_932066.1	ILMN_169671	LOC286467	XR_015266.1	XR_015266.1		286467	113430093	XR_015266.1	LOC286467		ILMN_1701966	0000780040	S	256	CTGTGACCTCGCTTCACTTCTCCATACATGGCTGTTATAGCAGAAAATCC	X	-	130787067-130787074:130792001-130792042	Xq26.2a	PREDICTED: Homo sapiens hypothetical protein LOC286467 (LOC286467), misc RNA.					
Homo sapiens	RefSeq	XM_377041.3	ILMN_169671	LOC286467	XR_015266.1	XR_015266.1		286467	113430093	XR_015266.1	LOC286467		ILMN_1808290	0004760187	A	575	CTTCGAAACATAGAAAAACGGAATACTGAGATCTGGTGGGGGGCCGGCGG	X	-	130757858-130757907	Xq26.2a	PREDICTED: Homo sapiens hypothetical protein LOC286467 (LOC286467), misc RNA.					
Homo sapiens	RefSeq	NM_005438.2	ILMN_167733	FOSL1	NM_005438.2	NM_005438.2		8061	34734076	NM_005438.2	FOSL1	NP_005429.1	ILMN_1771841	0006960332	S	1332	CACTGCCACACTCTCCATCACCCTCTTCCTGTGATCCACCCAACCCTATC	11	-	65416554-65416603	11q13.1d	Homo sapiens FOS-like antigen 1 (FOSL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10918580] [evidence TAS]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10918580] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10918580] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10918580] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8230424] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 8230424] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10918580] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	fra-1; FRA1	fra-1; FRA1
Homo sapiens	RefSeq	NM_033086.1	ILMN_6304	FGD3	NM_033086.2	NM_033086.2		89846	134133264	NM_033086.2	FGD3	NP_149077.2	ILMN_1772686	0005270619	S	3262	CTGAGTGGCAGGCGCATGAGATTTGTGGCTGTTCCTGATGCTAGTGGCAC	9	+	94838248-94838297	9q22.31b	Homo sapiens FYVE, RhoGEF and PH domain containing 3 (FGD3), transcript variant 2, mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence ISS]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the activity of the GTPase Cdc42 [goid 43088] [evidence ISS]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence ISS]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a small monomeric GTPase [goid 31267] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC117260; FLJ00004; ZFYVE5	MGC117260; FLJ00004; ZFYVE5
Homo sapiens	Unigene	Hs.566573	ILMN_118869	HS.566573	Hs.566573		Hs.566573		6700518	AW293882			ILMN_1842797	0002000278	S	316	ACATTGTAAGACTTGTGAGGAAAAAAGGGAGGGGGAAGAATGTATCCCAC	6	-	26327731-26327780		UI-H-BW0-ain-e-07-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2729941 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000744.2	ILMN_30920	CHRNA4	NM_000744.3	NM_000744.3		1137	87298933	NM_000744.3	CHRNA4	NP_000735.1	ILMN_1729857	0003120678	S	3781	AGGAGACTCAGGCCCACATTGCCCACACCTGCCTCTGAACTGCTGCTGGT	20	-	61446818-61446867	20q13.33d	Homo sapiens cholinergic receptor, nicotinic, alpha 4 (CHRNA4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 8906617] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8906617] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 12189247] [evidence IDA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 16332175] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 8906617] [evidence NAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 16332175] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8906617] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [evidence ISS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of dopamine [goid 14059] [evidence ISS]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence ISS]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [pmid 17955458] [evidence IMP]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence ISS]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [pmid 14623738] [evidence IMP]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence ISS]; Any process that modulates the establishment or extent of the inhibitory postsynaptic potential (IPSP) which is a temporay decrease in postsynaptic potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential [goid 60080] [evidence ISS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA];  [goid 4889] [pmid 8906617] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [pmid 8906617] [evidence IDA]	EBN; NACRA4; EBN1; BFNC	NACRA4; BFNC; EBN; EBN1
Homo sapiens	Unigene	Hs.245812	ILMN_83132	HS.245812	Hs.245812		Hs.245812		6131737	AW130132			ILMN_1903135	0000610672	S	144	AGCACAGGAGAGAGTTGGCTAGAGGTGGCCTTCTTGAGAGGAGCAGTGGG	4	-	36024815-36024864		xf28f11.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2619405 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022774.1	ILMN_26136	DEM1	NM_022774.1	NM_022774.1		64789	12232456	NM_022774.1	DEM1	NP_073611.1	ILMN_1783996	0004220097	S	1475	CCAGGACCAAGGCTCAGGGATGAGTGGGAGAGATGGGTTATACTGTCCCT	1	+	40754073-40754122	1p34.2c	Homo sapiens defects in morphology 1 homolog (S. cerevisiae) (DEM1), mRNA.				FLJ21144; FLJ13183; FLJ11445	FLJ21144; FLJ13183; FLJ11445
Homo sapiens	RefSeq	NM_022774.1	ILMN_26136	DEM1	NM_022774.1	NM_022774.1		64789	12232456	NM_022774.1	DEM1	NP_073611.1	ILMN_3242008	0006280132	S	2099	GGCTGAGAGAGGAGAATAGCTTGAACCTGAGAGGCAGAGGTTACAGTGAG	1	+	40754697-40754746	1p34.2c	Homo sapiens defects in morphology 1 homolog (S. cerevisiae) (DEM1), mRNA.				FLJ21144; FLJ13183; FLJ11445	FLJ21144; FLJ13183; FLJ11445
Homo sapiens	RefSeq	NM_022774.1	ILMN_26136	DEM1	NM_022774.1	NM_022774.1		64789	12232456	NM_022774.1	DEM1	NP_073611.1	ILMN_2117569	0003870450	S	1902	ACGAAAAACATAATACATGGCTGGGTGCGGTGGCACATGCCTGTAATCCC	1	+	40754500-40754549	1p34.2c	Homo sapiens defects in morphology 1 homolog (S. cerevisiae) (DEM1), mRNA.				FLJ21144; FLJ13183; FLJ11445	FLJ21144; FLJ13183; FLJ11445
Homo sapiens	RefSeq	XR_038278.1	ILMN_343497	LOC729023	XR_038278.1	XR_038278.1		729023	169191490	XR_038278.1	LOC729023		ILMN_3301920	0003460274	M	2837	AGGGTGACCCCTTCATCTCCAGGAAGGAGAAGAAGCAGCATTGTAGCCAG	10	+	52115327-52115376	10q11.23b	PREDICTED: Homo sapiens misc_RNA (LOC729023), miscRNA.					
Homo sapiens	RefSeq	NM_018059.2	ILMN_137090	FLJ10324	NM_018059.2	NM_018059.2		55698	33620756	NM_018059.2	FLJ10324	NP_060529.2	ILMN_1800911	0004890754	S	5762	CCCCGCAGGTCTCAGCCTCGTTTTTACCCAGCCCCTATTTAAGACGCGGT	7	-	4800956-4801005	7p22.1d	Homo sapiens hypothetical protein FLJ10324 (FLJ10324), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1849	KIAA1849
Homo sapiens	Unigene	Hs.580542	ILMN_132723	HS.580542	Hs.580542		Hs.580542		5660148	AI924184			ILMN_1821997	0002030689	S	445	CTCAGAAGCCTCCTTGCTCCTCTCTGAAGGCATCCTTGGACCAGTTGTGC	2	+	118971267-118971316		wn53g02.x1 NCI_CGAP_Lu19 Homo sapiens cDNA clone IMAGE:2449202 3, mRNA sequence					
Homo sapiens	RefSeq	XM_927507.1	ILMN_37688	LOC644342	XM_927507.1	XM_927507.1		644342	89060466	XM_927507.1	LOC644342	XP_932600.1	ILMN_1656698	0000450053	S	1456	GGTGAAAACGGAGAGAAGAATGCTCCCGACAGCACCGACAGCACCGACAG	X	+	33831-33880		PREDICTED: Homo sapiens similar to similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1) (LOC644342), mRNA.					
Homo sapiens	RefSeq	XR_040478.1	ILMN_348690	LOC100126784	XR_040478.1	XR_040478.1		100126784	169202821	XR_040478.1	LOC100126784		ILMN_3268883	0001780204	M	1746	TGAGAGCACCTTAGCGCCTGCGGGTCTGCACATGCTCCGTGAGCTAGATA				11p15.1b	PREDICTED: Homo sapiens misc_RNA (LOC100126784), miscRNA.					
Homo sapiens	RefSeq	XM_946153.1	ILMN_137914	LLGL2	XM_946153.1	XM_946153.1		3993	89042954	XM_946153.1	LLGL2	XP_951246.1	ILMN_1797588	0002630296	I	3301	GTCTAGGGAGAGGTAAACGAGGGGAGGAGAGATCAGTCAAGGATGACGTG				17q25.1c	PREDICTED: Homo sapiens lethal giant larvae homolog 2 (Drosophila), transcript variant 10 (LLGL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Homo sapiens	RefSeq	NM_032830.1	ILMN_2574	CIRH1A	NM_032830.1	NM_032830.1		84916	14249535	NM_032830.1	CIRH1A	NP_116219.1	ILMN_1796235	0004200162	S	2026	ACACTCGTGGCAGTAGAACGGCCTCTGGATGACATCATTGCTCAGCTCCC	16	+	67760258-67760307	16q22.1d	Homo sapiens cirrhosis, autosomal recessive 1A (cirhin) (CIRH1A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 16225863] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TEX292; KIAA1988; CIRHIN; FLJ14728; NAIC	TEX292; KIAA1988; CIRHIN; FLJ14728; NAIC
Homo sapiens	RefSeq	XM_001713713.1	ILMN_340125	LOC100130086	XM_001713713.1	XM_001713713.1		100130086	169216696	XM_001713713.1	LOC100130086	XP_001713765.1	ILMN_3239684	0004590053	S	2	CCCACCACACGCCGTCGCCATGCAGTCCAGTGGGGAGTCGGAGGCAGCCT	X	-	148663530-148663579	Xq28b	PREDICTED: Homo sapiens hypothetical protein LOC100130086 (LOC100130086), mRNA.					
Homo sapiens	Unigene	Hs.563147	ILMN_116076	HS.563147	Hs.563147		Hs.563147		14292080	BG911604			ILMN_1816157	0004070632	S	365	CCTGTAGCTGGGGCTGCTACTGATCCCCCACTCTTGCTGCCAAGCACAAA	3	-	52081738-52081787		602812728F1 NCI_CGAP_Brn67 Homo sapiens cDNA clone IMAGE:4944798 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001100419.1	ILMN_307554	C19ORF60	NM_001100419.1	NM_001100419.1		55049	154426265	NM_001100419.1	C19orf60	NP_001093889.1	ILMN_3188110	0006760414	A	627	CCTTAGGTTTGATGCGGAATCTGCCGAGTGATGGCGGCTCCCCAGGGATG	19	+	18563960-18563990:18563991-18564009	19p13.11c	Homo sapiens chromosome 19 open reading frame 60 (C19orf60), transcript variant 2, mRNA.				FLJ20850; FLJ37391; FLJ30108; FLJ34606	FLJ20850; FLJ37391; FLJ30108; FLJ34606
Homo sapiens	RefSeq	NM_001014286.1	ILMN_1616	FAM48A	NM_001014286.1	NM_001014286.1		55578	62122947	NM_001014286.1	FAM48A	NP_001014308.1	ILMN_1802376	0004810040	I	2323	GTTGTCTCAGCTTGGCTCTGTCGAGAACAGACCTGAGCAAAGCCTTCCTC	13	-	36482739-36482788	13q13.3b	Homo sapiens family with sequence similarity 48, member A (FAM48A), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16751104] [evidence IPI]	bA421P11.4; FP757; C13; P38IP; C13orf19	bA421P11.4; FP757; C13; P38IP; C13orf19
Homo sapiens	RefSeq	NM_000314.3	ILMN_181706	PTEN	NM_000314.4	NM_000314.4		5728	110224474	NM_000314.4	PTEN	NP_000305.3	ILMN_1701134	0006840072	S	2850	TAATCTGGACATTCGAGGAATTGGCCGCTGTCACTGCTTGTTGTTTGCGC	10	+	89692811-89692860	10q23.31a	Homo sapiens phosphatase and tensin homolog (PTEN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9367992] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9187108] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9593664] [evidence EXP]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 10918569] [evidence TAS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9367992] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9256433] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10468583] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [pmid 9616126] [evidence IMP]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [pmid 10866658] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process of removing a phosphate group from any mono- or polyphosphorylated inositol [goid 46855] [pmid 9593664] [evidence IDA]; The process of removing one or more phosphate groups from a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46856] [pmid 9811831] [evidence IDA]; The process of removing one or more phosphate groups from a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46856] [pmid 9593664] [evidence IDA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of focal adhesion formation, the establishment and maturation of focal adhesions [goid 51895] [pmid 9616126] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [pmid 10760291] [evidence IMP]	Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3-phosphate + H2O = 1-phosphatidyl-1D-myo-inositol + phosphate [goid 4438] [pmid 9811831] [evidence IDA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 9256433] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 9256433] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15951562] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17218262] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18064632] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidyl inositol-4,5-bisphosphate + phosphate [goid 16314] [pmid 9811831] [evidence IDA]; Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidyl inositol-4,5-bisphosphate + phosphate [goid 16314] [pmid 9593664] [evidence IDA]; Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidyl inositol-4,5-bisphosphate + phosphate [goid 16314] [pmid 9593664] [evidence EXP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 10646847] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 10760291] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 10646847] [evidence IPI]; Catalysis of the reaction: inositol-1,3,4,5-tetrakisphosphate + H2O = inositol-1,4,5-trisphosphate + phosphate [goid 51717] [pmid 9593664] [evidence IDA]; Catalysis of the reaction: phosphatidylinositol-3,4-bisphosphate + H2O = phosphatidyl inositol-4-phosphate + phosphate [goid 51800] [pmid 9811831] [evidence IDA]	MMAC1; MHAM; TEP1; BZS; PTEN1; MGC11227	MMAC1; MHAM; TEP1; BZS; PTEN1; MGC11227
Homo sapiens	RefSeq	XM_929412.1	ILMN_32958	FLJ30679	XM_929412.1	XM_929412.1		146512	89040536	XM_929412.1	FLJ30679	XP_934505.1	ILMN_1711772	0001030673	A	1438	AAAACAGAGCCCAAGTCTCTCCGATGGTCAGCCTGGCACGGCCCCCAGAT	16	+	85147870-85147919	16q24.1c	PREDICTED: Homo sapiens hypothetical protein FLJ30679 (FLJ30679), mRNA.					
Homo sapiens	RefSeq	XM_171054.4	ILMN_309074	SUSD5	NM_015551.1	NM_015551.1		26032	150378551	NM_015551.1	SUSD5	NP_056366.1	ILMN_1771878	0004640575	I	4929	ATGCTCATGAAAATTGGGGGAGGGGGTTCTATTAACACAAAGCTTCTGAG	3	-	33192390-33192439	3p22.3c	Homo sapiens sushi domain containing 5 (SUSD5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]	KIAA0527	
Homo sapiens	RefSeq	NM_021199.2	ILMN_4694	SQRDL	NM_021199.2	NM_021199.2		58472	52851410	NM_021199.2	SQRDL	NP_067022.1	ILMN_1667199	0006770707	S	1348	GGAATATGATGCTAAGGGGTTACTGGGGAGGACCAGCGTTTCTGCGCAAG	15	+	43768692-43768707:43770463-43770496	15q21.1a	Homo sapiens sulfide quinone reductase-like (yeast) (SQRDL), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	CGI-44	CGI-44
Homo sapiens	RefSeq	NM_000636.2	ILMN_19880	SOD2	NM_000636.2	NM_000636.2		6648	67782304	NM_000636.2	SOD2	NP_000627.2	ILMN_1792922	0005960731	I	1500	GAATTGGGCAGCTCATGCTTGAGACCCAATCTCCATGATGACCTACAAGC	6	-	160102798-160102847	6q25.3f	Homo sapiens superoxide dismutase 2, mitochondrial (SOD2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15087454] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [pmid 9462746] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1315] [pmid 14980699] [evidence IMP]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9393747] [evidence IMP]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [pmid 14980699] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 9462746] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1315] [evidence ISS]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [pmid 14980699] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MNSOD; Mn-SOD; IPO-B	MNSOD; IPO-B; Mn-SOD
Homo sapiens	RefSeq	NM_016423.1	ILMN_16787	ZNF219	NM_016423.1	NM_016423.1		51222	7705974	NM_016423.1	ZNF219	NP_057507.1	ILMN_1688295	0006550632	S	2767	GTCACAGTGCCTTAGAAGTGGCAGAGGTGAGGGTCAAAGAACGGGGTCCC	14	-	20628299-20628348	14q11.2c	Homo sapiens zinc finger protein 219 (ZNF219), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10819330] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10819330] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZFP219	ZFP219
Homo sapiens	RefSeq	NM_030816.2	ILMN_30045	ANKRD13C	NM_030816.2	NM_030816.2		81573	67972410	NM_030816.2	ANKRD13C	NP_110443.2	ILMN_2148507	0004810053	S	2184	TGACCCTAAGACCTGCGTATGTGAAGCAGCTATGAGTGCTGTGATTTGTT	1	-	70500694-70500743	1p31.1k	Homo sapiens ankyrin repeat domain 13C (ANKRD13C), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]			DKFZP566D1346; dJ677H15.3; FLJ14998; RP4-677H15.5	DKFZP566D1346; dJ677H15.3; FLJ14998; RP4-677H15.5
Homo sapiens	RefSeq	NM_152388.1	ILMN_179147	ALS2CR4	NM_001044385.1	NM_001044385.1		65062	113205074	NM_001044385.1	ALS2CR4	NP_001037850.1	ILMN_1800958	0000050348	S	1164	CTCCAGCCATGGATTGTGGTGAATCTCGTGGTGGCTCTTCTGGTTGGATT	2	-	202490795-202490844	2q33.1f	Homo sapiens amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 4 (ALS2CR4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ33282; DKFZp313L091	FLJ33282; DKFZp313L091
Homo sapiens	RefSeq	NM_015263.1	ILMN_167644	DMXL2	NM_015263.2	NM_015263.2		23312	119120893	NM_015263.2	DMXL2	NP_056078.2	ILMN_1705663	0004860438	S	9007	GACATCAGGCAAAGGCAGCTCATTCACACGTTCCAGGCCCATGACTCAGC	15	-	51742395-51742444	15q21.2b	Homo sapiens Dmx-like 2 (DMXL2), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [pmid 11809763] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]		Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [pmid 11809763] [evidence IDA]	KIAA0856; FLJ26672; RC3	KIAA0856; RC3
Homo sapiens	RefSeq	NM_002043.1	ILMN_175572	GABRR2	NM_002043.2	NM_002043.2		2570	153266865	NM_002043.2	GABRR2	NP_002034.2	ILMN_1676870	0005390639	S	1203	ACCATGATGCTGGATGGAAGCTACAGTGAGTCTGAGGCCAACAGCCTGGC	6	-	90024884-90024933	6q15c	Homo sapiens gamma-aminobutyric acid (GABA) receptor, rho 2 (GABRR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1315307] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1315307] [evidence TAS]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 1315307] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [pmid 1315307] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Homo sapiens	RefSeq	XR_001261.1	ILMN_35497	FLJ12078	XR_001261.1	XR_001261.1		80042	88988357	XR_001261.1	FLJ12078		ILMN_1775444	0003130086	A	2413	GGGGTGAAGTGGAAAATCCAGGGCAAGTTTCGTGGAGGAAGTGATGCCTG				5q15b	PREDICTED: Homo sapiens hypothetical protein FLJ12078 (FLJ12078), misc RNA.					
Homo sapiens	RefSeq	NM_198544.2	ILMN_19061	APITD1	NM_199295.1	NM_199295.1		378708	41327704	NM_199295.1	APITD1	NP_954992.1	ILMN_1793360	0005960709	A	734	CAGCAAACAGACCATTGCGGCCATTTCGGAGCTGACTTTCCGACAGTGTG	1	+	10416560-10416609	1p36.22c	Homo sapiens apoptosis-inducing, TAF9-like domain 1 (APITD1), transcript variant B, mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC32686; CENP-S; CENPS	MGC32686; CENP-S; CENPS
Homo sapiens	RefSeq	NM_199295.1	ILMN_19061	APITD1	NM_199295.1	NM_199295.1		378708	41327704	NM_199295.1	APITD1	NP_954992.1	ILMN_1788135	0001070360	I	467	CTGAGAACGTTGCCGTGAAGAGGCTTAAAAGCAAGACCCGGAGTGGCGAC	1	+	10413853-10413902	1p36.22c	Homo sapiens apoptosis-inducing, TAF9-like domain 1 (APITD1), transcript variant B, mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC32686; CENP-S; CENPS	MGC32686; CENP-S; CENPS
Homo sapiens	Unigene	Hs.153661	ILMN_79137	HS.153661	Hs.153661		Hs.153661		23689919	BU742930			ILMN_1875763	0006130563	S	46	TCCTTGAAGATGGTGTGATGGAAGAGAAAGCGCGGCCTGAGTATCACGTG	7	-	43572029-43572078		UI-E-EO1-aiv-f-16-0-UI.s1 UI-E-EO1 Homo sapiens cDNA clone UI-E-EO1-aiv-f-16-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001726437.1	ILMN_346898	LOC100130795	XM_001726437.1	XM_001726437.1		100130795	169213693	XM_001726437.1	LOC100130795	XP_001726489.1	ILMN_3266745	0006860161	M	494	CAAGTAGCCGGGACCACAGGCGTTCACCCCCACACCTGGATCCTTTCCAA				19p13.3d	PREDICTED: Homo sapiens hypothetical protein LOC100130795 (LOC100130795), mRNA.					
Homo sapiens	RefSeq	NM_033542.2	ILMN_16777	SYS1	NM_033542.2	NM_033542.2		90196	56676380	NM_033542.2	SYS1	NP_291020.1	ILMN_1756590	0005090097	I	2492	CCATCTGTGGTTGGAGCGCCTCTTTGGGATTCACTTCAAGGTCTTGTGCC	20	+	43430932-43430981	20q13.12b	Homo sapiens SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) (SYS1), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		dJ453C12.4.1; C20orf169; dJ453C12.4	dJ453C12.4.1; C20orf169; dJ453C12.4
Homo sapiens	RefSeq	NM_005864.2	ILMN_17620	EFS	NM_032459.1	NM_032459.1		10278	14589875	NM_032459.1	EFS	NP_115835.1	ILMN_1702105	0000110706	A	2552	GCACCTTAATAAACCCTGCTGTCTGCCTCCCTGACTCTGCTTCTTGGGAG	14	-	23825848-23825897	14q11.2f	Homo sapiens embryonal Fyn-associated substrate (EFS), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9349509] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9349509] [evidence TAS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	HEFS; EFS1; EFS2; SIN	HEFS; EFS1; EFS2; SIN
Homo sapiens	RefSeq	NM_138575.1	ILMN_23951	PGAM5	NM_138575.2	NM_138575.2		192111	142388394	NM_138575.2	PGAM5	NP_612642.1	ILMN_1748027	0004890678	S	925	CCTTGTCCCTCAACCTGCTCTGGTGCCCCACTCTCAGCACCACAGAATGA	12	+	131805599-131805648	12q24.33d	Homo sapiens phosphoglycerate mutase family member 5 (PGAM5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			BXLBv68; MGC5352	MGC5352; BXLBv68
Homo sapiens	RefSeq	NM_005353.2	ILMN_909	ITGAD	NM_005353.2	NM_005353.2		3681	62548865	NM_005353.2	ITGAD	NP_005344.2	ILMN_1681945	0003390424	S	3846	CTGAGTGCCTCTCTGGGAATAGTCGGGGGAACCTATTTGTGGGCATTGAA	16	+	31345261-31345310	16p11.2c	Homo sapiens integrin, alpha D (ITGAD), mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 20187620] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9841932] [evidence NAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence NAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence NAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ADB2; FLJ39841; CD11D	FLJ39841; CD11D; ADB2
Homo sapiens	RefSeq	NM_152843.1	ILMN_5996	HPS4	NM_152843.1	NM_152843.1		89781	23110973	NM_152843.1	HPS4	NP_690056.1	ILMN_1727862	0003170504	A	2596	CACCTCTCTCCAGGATCTCTGCTGTCTCTTGGATCCCATCTGCCTAGATG	22	-	25177750-25177799	22q12.1a	Homo sapiens Hermansky-Pudlak syndrome 4 (HPS4), transcript variant 4, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 12756248] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12756248] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 12663659] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [pmid 12663659] [evidence IDA]; Electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins [goid 42827] [pmid 12756248] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 12663659] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [pmid 12663659] [evidence IDA]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [pmid 11836498] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism [goid 48075] [pmid 11836498] [evidence TAS]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 12663659] [evidence IPI]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12663659] [evidence IPI]	KIAA1667; LE; bK1048E9.4; bK1048E9.5	KIAA1667; LE; bK1048E9.4; bK1048E9.5
Homo sapiens	RefSeq	NM_015669.2	ILMN_17970	PCDHB5	NM_015669.2	NM_015669.2		26167	14195611	NM_015669.2	PCDHB5	NP_056484.1	ILMN_1814710	0004860441	S	2541	CCCAGGGCGCTGGTGAAGAAATAGGGAAAACTGCTGCCTTCCGGAATAGC	5	+	140497524-140497573	5q31.3b	Homo sapiens protocadherin beta 5 (PCDHB5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11322959] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 12231349] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 12231349] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11322959] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11322959] [evidence NAS]	DKFZP586B0217; PCDH-BETA5	DKFZP586B0217; PCDH-BETA5
Homo sapiens	RefSeq	NM_004717.2	ILMN_17388	DGKI	NM_004717.2	NM_004717.2		9162	32483395	NM_004717.2	DGKI	NP_004708.1	ILMN_1718266	0002120025	S	4665	ACCTGCCACGGATCGAATGGTACTTACAGGTACCTCTCTTAGGGACTCTG	7	-	137074852-137074901	7q33d	Homo sapiens diacylglycerol kinase, iota (DGKI), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9830018] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9830018] [evidence TAS]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 9830018] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17986458] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DGK-IOTA	DGK-IOTA
Homo sapiens	Unigene	Hs.579013	ILMN_131194	HS.579013	Hs.579013		Hs.579013		51667914	CR745865			ILMN_1839193	0001440427	S	346	CGTCTTTTTCGCCTCCTTGCCTCTGAGTTCTGTTTCGTGTGGGGGGTGAG	16	+	87589154-87589203		CR745865 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp971N1978 ; IMAGE:1841100 5, mRNA sequence					
Homo sapiens	RefSeq	NR_030369.1	ILMN_388157	MIR639	NR_030369.1	NR_030369.1		693224	262206182	NR_030369.1	MIR639		ILMN_3310514	0006330259	S	2	GCCGACGGGGCGCGCGCGGCCTGGAGGGGCGGGGCGGACGCAGAGCCGCG				19p13.12c	Homo sapiens microRNA 639 (MIR639), microRNA.					
Homo sapiens	RefSeq	NM_002691.1	ILMN_2618	POLD1	NM_002691.1	NM_002691.1		5424	4505932	NM_002691.1	POLD1	NP_002682.1	ILMN_1652580	0000290731	S	3132	GAGTTCTGCCAGCCCCGGGAGTCTGAGCTGTATCAGAAGGAGGTATCCCA	19	+	55612125-55612166:55612241-55612248	19q13.33c	Homo sapiens polymerase (DNA directed), delta 1, catalytic subunit 125kDa (POLD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16762037] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10559261] [evidence EXP]	Progression through S phase, the part of the mitotic cell cycle during which DNA synthesis takes place [goid 84] [pmid 16762037] [evidence IDA]; Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 3335506] [evidence IDA]; Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 1730053] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 3146346] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 16762037] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 16762037] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 16762037] [evidence IMP]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15670210] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CDC2; POLD	CDC2; POLD
Homo sapiens	RefSeq	XM_936674.1	ILMN_45922	LOC647625	XM_936674.1	XM_936674.1		647625	89028847	XM_936674.1	LOC647625	XP_941767.1	ILMN_1697757	0001740224	S	565	GGAGTTTTGCCGGAGGCTATCTGCAAGCTGAAGACCCTGGAGTGCTGTCA					PREDICTED: Homo sapiens similar to Suppressor Of Clr family member (soc-2) (LOC647625), mRNA.					
Homo sapiens	RefSeq	NM_198309.2	ILMN_20549	TTC8	NM_198310.2	NM_198310.2		123016	53759118	NM_198310.2	TTC8	NP_938052.1	ILMN_1652309	0000840484	A	1938	CCCAGCTACTTGGGAGGTGGAGGTGGGAGGATTATAAATAGAGACTTTCC	14	+	88413943-88413992	14q31.3d	Homo sapiens tetratricopeptide repeat domain 8 (TTC8), transcript variant 3, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; A protein complex that associates with the primary cilium and is involved in cilium biogenesis; consists of seven conserved proteins: BBS1, BBS2, BBS4, BBS5, BBS7, BBS8 and BBS9 [goid 34464] [pmid 17574030] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BBS8	BBS8
Homo sapiens	RefSeq	XM_001716258.1	ILMN_347035	LOC100128304	XM_001716258.1	XM_001716258.1		100128304	169201802	XM_001716258.1	LOC100128304	XP_001716310.1	ILMN_3190417	0003450132	A	1296	AGTATGCGGTGGTGAAAGGGTTAACGTTGTAGGGCAGGCTGACATTGCCC				10q25.1d	PREDICTED: Homo sapiens hypothetical protein LOC100128304 (LOC100128304), mRNA.					
Homo sapiens	Unigene	Hs.515967	ILMN_98970	HS.515967	Hs.515967		Hs.515967		6698729	AW292093			ILMN_1903347	0002060309	S	348	TGAGCTCTGAACTTCTTATGCTGTCAGGAGGTCCCACTTGCTGAACATGG	2	+	45137192-45137210:45165093-45165123		UI-H-BI2-agx-b-01-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2725585 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001008409.2	ILMN_9263	TTLL9	NM_001008409.2	NM_001008409.2		164395	134948770	NM_001008409.2	TTLL9	NP_001008409.1	ILMN_3307678	0003120468	S	1346	CTGCATGTTGTGGACATGGAAGCGAGGCTCACGGGAAGGGAGAAGCGAGT	20	+	29988948-29988973:29990606-29990629	20q11.21b	Homo sapiens tubulin tyrosine ligase-like family, member 9 (TTLL9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC120486; dJ310O13.1; C20orf125; MGC120487	MGC120486; dJ310O13.1; C20orf125; MGC120487
Homo sapiens	RefSeq	NM_015194.1	ILMN_22644	MYO1D	NM_015194.1	NM_015194.1		4642	51100973	NM_015194.1	MYO1D	NP_056009.1	ILMN_1805999	0001400474	S	4823	AGGAGGGCCTGGGTTTGGGTTCTTTCCTCCCAGCCTTTGGATGGTGCCTT	17	-	30819937-30819986	17q11.2e	Homo sapiens myosin ID (MYO1D), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	KIAA0727; myr4	KIAA0727; myr4
Homo sapiens	RefSeq	NM_030655.2	ILMN_11538	DDX11	NM_030655.2	NM_030655.2		1663	21536328	NM_030655.2	DDX11	NP_085913.1	ILMN_1679413	0000780092	I	865	TTCTGATGCCACCTCCAGCCGCCATCCACCAGACGCCAGCTTCCCCGCTG	12	+	31130232-31130281	12p11.21b	Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9013641] [evidence TAS]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [pmid 9013641] [evidence TAS]; Progression through S phase, the part of the mitotic cell cycle during which DNA synthesis takes place [goid 84] [pmid 9013641] [evidence TAS]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 9013641] [evidence TAS]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9013641] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]	CHL1; KRG2; MGC9335; CHLR1	CHL1; KRG2; MGC9335; CHLR1
Homo sapiens	RefSeq	NR_002998.1	ILMN_173768	SCARNA3	NR_002998.1	NR_002998.1		677679	91982753	NR_002998.1	SCARNA3		ILMN_3244216	0004850451	S	85	GGAGGTCTCTGTCTGGCTTAGGACAGCTGGCTAAGTCTGATCGTTCCCCT	1	-	175937542-175937591	1q25.1b	Homo sapiens small Cajal body-specific RNA 3 (SCARNA3), guide RNA.				HBI-100	HBI-100
Homo sapiens	RefSeq	NM_014467.1	ILMN_23854	SRPX2	NM_014467.2	NM_014467.2		27286	124517647	NM_014467.2	SRPX2	NP_055282.1	ILMN_1676213	0000940474	S	1845	CCAGCGTCGGGAGCAAAGGGACATATGCGAGTGAACTTGAGCCAGGGCAT	X	+	99812607-99812640:99812641-99812656	Xq22.1b	Homo sapiens sushi-repeat-containing protein, X-linked 2 (SRPX2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	SRPUL; RESDX	SRPX; SRPUL
Homo sapiens	RefSeq	XM_001131091.1	ILMN_163707	LOC729706	XM_001131091.1	XM_001131091.1		729706	113416492	XM_001131091.1	LOC729706	XP_001131091.1	ILMN_3244749	0004250162	S	181	GCCTCAGCCTCAGCTCCTCCTGCAGCCAAAAGACGGAAAACACATACGAA	5	-	17614069-17614118	5p15.1a	PREDICTED: Homo sapiens similar to hCG1809904 (LOC729706), mRNA.					
Homo sapiens	RefSeq	NM_203451.1	ILMN_176590	LOC400120	NM_203451.1	NM_203451.1		400120	44888824	NM_203451.1	LOC400120	NP_982276.1	ILMN_1797526	0003440519	S	2461	ACGTCCCCAAACACCATAAGACCAGCACAGAGTTGCTGCCCTAAAATGTA	13	+	36169230-36169279	13q13.3b	Homo sapiens hypothetical LOC400120 (LOC400120), mRNA.				MGC33996	MGC33996
Homo sapiens	RefSeq	NM_012486.1	ILMN_4951	PSEN2	NM_012486.1	NM_012486.1		5664	7108359	NM_012486.1	PSEN2	NP_036618.1	ILMN_1714417	0004040605	A	2048	ACCTGGGTGCTCTGGCTGGAGAGGAAAAGCCAGTTCCCTACGAGGAGTGT	1	+	225150258-225150307	1q42.13a	Homo sapiens presenilin 2 (Alzheimer disease 4) (PSEN2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 9298903] [evidence TAS]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the nuclear inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5639] [pmid 9298903] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15274632] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15274632] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15274632] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [pmid 15274632] [evidence IDA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 9298903] [evidence TAS]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [pmid 15274632] [evidence TAS]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [pmid 8939861] [evidence TAS]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [pmid 15274632] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [pmid 15274632] [evidence TAS]; Any process that activates or increases the activity of an enzyme [goid 43085] [pmid 15274632] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12297508] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AD3L; STM2; PS2; AD4	AD3L; STM2; PS2; AD4
Homo sapiens	RefSeq	NM_001024610.1	ILMN_19971	LOC286076	NM_001024610.1	NM_001024610.1		286076	66912187	NM_001024610.1	LOC286076	NP_001019781.1	ILMN_1664089	0000630528	S	907	CTCTCTGCACTCTGAAGGGAGGCCCAGTGGCTGCAATATTCTTCTTTGGG	8	+	144852476-144852525	8q24.3g	Homo sapiens hypothetical protein LOC286076 (LOC286076), mRNA.					
Homo sapiens	RefSeq	XM_168578.6	ILMN_167859	LOC732156	XM_001132029.1	XM_001132029.1		732156	113419188	XM_001132029.1	LOC732156	XP_001132029.1	ILMN_1670001	0003460102	I	868	AAGGTTGAAACCACTCCACCCACCGTGTTGGTCTATTCAGCCACCACTGA				7q22.1d	PREDICTED: Homo sapiens hypothetical protein LOC732156 (LOC732156), mRNA.					
Homo sapiens	RefSeq	XM_001720494.1	ILMN_348286	LOC100131205	XM_001720494.1	XM_001720494.1		100131205	169162492	XM_001720494.1	LOC100131205	XP_001720546.1	ILMN_3214532	0000650735	A	300	GTGCGTATTGAGCACATTAAGCATTCTAAGAGCCGAGATAGCTTCCTGAA				1q32.3b	PREDICTED: Homo sapiens hypothetical protein LOC100131205, transcript variant 3 (LOC100131205), mRNA.					
Homo sapiens	RefSeq	NR_030315.1	ILMN_388037	MIR548B	NR_030315.1	NR_030315.1		693128	262205916	NR_030315.1	MIR548B		ILMN_3309980	0006280162	S	41	TGGCCTTTATTTTCAATGGCAAGAACCTCAGTTGCTTTTGTGCCAACCTA				6q22.31a	Homo sapiens microRNA 548b (MIR548B), microRNA.					
Homo sapiens	RefSeq	XR_016385.2	ILMN_165526	LOC642828	XR_016385.2	XR_016385.2		642828	169166354	XR_016385.2	LOC642828		ILMN_3289352	0007000059	M	732	GGAAATATGAGATTACGGAGCAGCGCAAGATTGATCAGAAAGCTGTGGAC	4	+	66122487-66122536	4q13.1f	PREDICTED: Homo sapiens misc_RNA (LOC642828), miscRNA.					
Homo sapiens	RefSeq	NM_002425.1	ILMN_4442	MMP10	NM_002425.1	NM_002425.1		4319	4505204	NM_002425.1	MMP10	NP_002416.1	ILMN_1741847	0000150180	S	1369	CAGTGGATCATCACAGTTTGAGTTTGACCCCAATGCCAGGATGGTGACAC	11	-	102641558-102641607	11q22.2b	Homo sapiens matrix metallopeptidase 10 (stromelysin 2) (MMP10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 2844164] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2844164] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 2844164] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 2844164] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2844164] [evidence TAS]	SL-2; STMY2	SL-2; STMY2
Homo sapiens	RefSeq	XM_001722702.1	ILMN_349581	LOC100129588	XM_001722702.1	XM_001722702.1		100129588	169163129	XM_001722702.1	LOC100129588	XP_001722754.1	ILMN_3269852	0003180711	M	216	GAGCTCCAGGTTGCCAGCTAGGGGTTTTCGGGACCATAGACCAAGCAACC	2	-	31247803-31247852	2p23.1a	PREDICTED: Homo sapiens VLCS3029 (LOC100129588), mRNA.					
Homo sapiens	RefSeq	XR_016984.2	ILMN_169646	LOC340888	XR_016984.2	XR_016984.2		340888	169191499	XR_016984.2	LOC340888		ILMN_3286287	0000460068	M	985	CACAGGGAATTCTCTTTCTTCGCTGAAGTGTGACATCTCCACTCAAGTCC	10	+	69181020-69181069	10q21.3d	PREDICTED: Homo sapiens misc_RNA (LOC340888), miscRNA.					
Homo sapiens	RefSeq	XM_936425.1	ILMN_37772	LOC340527	XM_936425.1	XM_936425.1		340527	89060845	XM_936425.1	LOC340527	XP_941518.1	ILMN_1784596	0001990202	I	842	CCATTCAAGGGCACCGTATGTCTCACTGTGGGGTGATGGGCAAGGACCCA				Xq13.1d	PREDICTED: Homo sapiens similar to Nance-Horan syndrome protein (LOC340527), mRNA.					
Homo sapiens	RefSeq	XM_943431.1	ILMN_137445	VCX3A	XM_943431.1	XM_943431.1		51481	89060554	XM_943431.1	VCX3A	XP_948524.1	ILMN_1741129	0007570538	A	333	CGGCCAAGGCCACGGAGGCAGGAAAGAGGAAGTCCTCCTCTCAGCCGAGC				Xp22.31f	PREDICTED: Homo sapiens variable charge, X-linked 3A, transcript variant 3 (VCX3A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10903929] [evidence IEP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10903929] [evidence IMP]			
Homo sapiens	RefSeq	NM_052846.1	ILMN_9163	EMILIN3	NM_052846.1	NM_052846.1		90187	45433500	NM_052846.1	EMILIN3	NP_443078.1	ILMN_1795266	0002850075	S	3081	GGTGATGCCCACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTG	20	-	39989302-39989351	20q12c	Homo sapiens elastin microfibril interfacer 3 (EMILIN3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C20orf130; DKFZp434A2410; dJ620E11.4; EMILIN5	DKFZp434A2410; dJ620E11.4; C20orf130; EMILIN5
Homo sapiens	RefSeq	XR_038503.1	ILMN_344037	LOC728737	XR_038503.1	XR_038503.1		728737	169191498	XR_038503.1	LOC728737		ILMN_3225624	0002470739	A	804	GATAATGTCAGCAGTGAGAGACGAGGATCCACTGGAATCAGCCAATACAC	10	+	64652724-64652773	10q21.2b	PREDICTED: Homo sapiens misc_RNA (LOC728737), miscRNA.					
Homo sapiens	RefSeq	NM_018273.2	ILMN_8453	TMEM143	NM_018273.2	NM_018273.2		55260	32171253	NM_018273.2	TMEM143	NP_060743.2	ILMN_1732187	0006180678	S	2030	TGTGCTAGGTAGGTGAACCAGAAACCACCCTCGCCACCAAGACTCGCTCC	19	-	53527597-53527646	19q13.32c	Homo sapiens transmembrane protein 143 (TMEM143), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ10922	FLJ10922
Homo sapiens	RefSeq	XM_938483.1	ILMN_175427	VEGFB	XM_001128909.1	XM_001128909.1		7423	113422941	XM_001128909.1	VEGFB	XP_001128909.1	ILMN_1772274	0003060132	I	1245	TGCACATAGAGGGAACAGAAGATTGCTGTGGTTGGCGTCCTCGGGCCCCA				11q13.1a	PREDICTED: Homo sapiens vascular endothelial growth factor B (VEGFB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8919691] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9684805] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 9684805] [evidence EXP]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 8919691] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8637916] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8637916] [evidence TAS]	Interacting selectively with any vascular endothelial growth factor receptor [goid 5172] [pmid 8919691] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]		
Homo sapiens	RefSeq	NR_002920.1	ILMN_32814	SNORA8	NR_002920.1	NR_002920.1		654320	86604718	NR_002920.1	SNORA8		ILMN_3238707	0003800278	S	5	CTGCATGGTATCTGCACTCAGCAGTTTACACCTGCTAGGGTGTTCAAAGG	11	-	93465611-93465660	11q21a	Homo sapiens small nucleolar RNA, H/ACA box 8 (SNORA8), small nucleolar RNA.				ACA8	ACA8
Homo sapiens	RefSeq	NM_144645.1	ILMN_5377	C4ORF36	NM_144645.1	NM_144645.1		132989	21389478	NM_144645.1	C4orf36	NP_653246.1	ILMN_2214713	0006760019	S	587	CAGCTTCTCCTGAGGGAAAGGCCAGCCGGTTTGAGAAGACCTCTTCCATC	4	-	88027940-88027989	4q21.3e	Homo sapiens chromosome 4 open reading frame 36 (C4orf36), mRNA.				MGC26744	MGC26744
Homo sapiens	RefSeq	NM_006938.2	ILMN_807	SNRPD1	NM_006938.2	NM_006938.2		6632	28416941	NM_006938.2	SNRPD1	NP_008869.1	ILMN_1768393	0001510039	S	1203	CTGTGGCACCTACCCACAGGGGAAGTAAGAAGTTTGTTTTGGTATTTCGG	18	+	17463809-17463858	18q11.2a	Homo sapiens small nuclear ribonucleoprotein D1 polypeptide 16kDa (SNRPD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 3260384] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 7527560] [evidence TAS]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 7527560] [evidence TAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 1701240] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 3260384] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]	SNRPD; HsT2456; SMD1	SNRPD; HsT2456; SMD1
Homo sapiens	RefSeq	NR_002563.1	ILMN_21513	SNORD27	NR_002563.1	NR_002563.1		9301	74315925	NR_002563.1	SNORD27		ILMN_1755004	0001240246	S	22	GACAAGCATATGGCTGAACTTTCAAGTGATGTCATCTTACTACTGAGAAG	11	-	62622484-62622533	11q12.3b	Homo sapiens small nucleolar RNA, C/D box 27 (SNORD27), small nucleolar RNA.				U27; RNU27	U27; RNU27
Homo sapiens	RefSeq	NM_002590.2	ILMN_2678	PCDH8	NM_002590.2	NM_002590.2		5100	6631101	NM_002590.2	PCDH8	NP_002581.2	ILMN_2275711	0004120121	I	2649	CCCAACATGTTCGACGTGCTCACCTTCCCTGGCACCGGCAAAGCGCCCTT	13	-	53420076-53420125	13q21.1a	Homo sapiens protocadherin 8 (PCDH8), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9787079] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9787079] [evidence TAS]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9787079] [evidence TAS]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PAPC; ARCADLIN	PAPC; ARCADLIN
Homo sapiens	RefSeq	NM_002590.2	ILMN_2678	PCDH8	NM_002590.2	NM_002590.2		5100	6631101	NM_002590.2	PCDH8	NP_002581.2	ILMN_1740623	0004180348	A	3379	ACCTGTCCCCGAAGAAGGGAGCCAATGAAAATGTGTAATCCCATGCTGCA	13	-	53418682-53418694:53418695-53418731	13q21.1a	Homo sapiens protocadherin 8 (PCDH8), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9787079] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9787079] [evidence TAS]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9787079] [evidence TAS]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PAPC; ARCADLIN	PAPC; ARCADLIN
Homo sapiens	Unigene	Hs.564510	ILMN_117162	HS.564510	Hs.564510		Hs.564510		24792296	CA429570			ILMN_1896082	0000010544	S	540	CTCCTGCAAGGCCCCCAAGAGCATCCAAACAGACATGCAGTGTGAGAGCC	13	-	110430414-110430463		UI-H-FH1-bfo-c-14-0-UI.s1 NCI_CGAP_FH1 Homo sapiens cDNA clone UI-H-FH1-bfo-c-14-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_942121.1	ILMN_40613	LOC645843	XM_942121.2	XM_942121.2		645843	113415278	XM_942121.2	LOC645843	XP_947214.1	ILMN_1675560	0003440020	S	127	TTGGCTTTGTCTATGCAGCACTGGCTGCTTTAGGTGGGATCAGTGGTTAT				3q25.2a	PREDICTED: Homo sapiens QMDP9344 (LOC645843), mRNA.					
Homo sapiens	RefSeq	NM_006183.3	ILMN_11678	NTS	NM_006183.3	NM_006183.3		4922	31563516	NM_006183.3	NTS	NP_006174.1	ILMN_2189366	0006270296	S	1062	TCCTCATGAATCTCTCAATTATAGGAAAAGTTATTGTGATAAAATAGGAA	12	+	84800726-84800775	12q21.31e	Homo sapiens neurotensin (NTS), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8954810] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8954810] [evidence NAS]; Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IEA]	NMN-125; NN; NT; NT/N; NTS1	NMN-125; NN; NT; NT/N; NTS1
Homo sapiens	RefSeq	NM_006183.3	ILMN_11678	NTS	NM_006183.3	NM_006183.3		4922	31563516	NM_006183.3	NTS	NP_006174.1	ILMN_1764690	0004220326	S	428	CCACAAAATCTGTCACAGCAGGGCTTTTCAACACTGGGAGTTAATCCAGG	12	+	84796439-84796478:84800132-84800141	12q21.31e	Homo sapiens neurotensin (NTS), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8954810] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8954810] [evidence NAS]; Any process that modulates the size of blood vessels [goid 50880] [evidence IEA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IEA]	NMN-125; NN; NT; NT/N; NTS1	NMN-125; NN; NT; NT/N; NTS1
Homo sapiens	RefSeq	XM_940352.1	ILMN_42976	LOC651219	XM_940352.1	XM_940352.1		651219	89058285	XM_940352.1	LOC651219	XP_945445.1	ILMN_1682257	0002760025	S	61	GCCAATGAGAATGTTCAGCCAAGGGTGAGGTGGCTGAACTGTGGGATTAA					PREDICTED: Homo sapiens similar to general transcription factor II, i isoform 1 (LOC651219), mRNA.					
Homo sapiens	RefSeq	NM_013249.1	ILMN_24499	ZNF214	NM_013249.1	NM_013249.1		7761	7019580	NM_013249.1	ZNF214	NP_037381.1	ILMN_1797701	0000070154	S	1867	CACAGTTCTAATCTTCACATTCATCAGAGGGTCCATACAGGAGAGAAGCC	11	-	6977831-6977880	11p15.4b	Homo sapiens zinc finger protein 214 (ZNF214), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10762538] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BAZ1	BAZ1
Homo sapiens	RefSeq	NM_031459.3	ILMN_7290	SESN2	NM_031459.3	NM_031459.3		83667	32454742	NM_031459.3	SESN2	NP_113647.1	ILMN_1751598	0006650630	S	3145	TCCTCTCTGACCAGTTTGGAGGGCACTGAAGAAAGGCAAGGGCCGTGCTG	1	+	28481249-28481298	1p35.3b	Homo sapiens sestrin 2 (SESN2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		DKFZp761M02121; DKFZp761M0212; SEST2; HI95; SES2	DKFZp761M02121; DKFZp761M0212; SEST2; HI95; SES2
Homo sapiens	RefSeq	NM_206996.1	ILMN_6928	SPAG17	NM_206996.1	NM_206996.1		200162	46240863	NM_206996.1	SPAG17	NP_996879.1	ILMN_1693114	0002450653	S	6995	CTAGACACTCTGAATAGGGCAGGTCCCAGGAACACCTGAAAGGAGCACAT	1	-	118297877-118297926	1p12c	Homo sapiens sperm associated antigen 17 (SPAG17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]			FLJ44343; FLJ44353; FLJ34497; RP4-776P7.2; DKFZp434B0610; PF6	FLJ44343; FLJ44353; FLJ34497; RP4-776P7.2; DKFZp434B0610; PF6
Homo sapiens	RefSeq	NM_207510.2	ILMN_6474	LCNL1	NM_207510.3	NM_207510.3		401562	148226287	NM_207510.3	LCNL1	NP_997393.3	ILMN_1747800	0003520136	S	1691	ACGCCGCCCACCTGCTCCTTGTTTTGCAGTGAGGGGTCCAGCCCCTGAGT	9	+	138999886-138999935	9q34.3e	Homo sapiens lipocalin-like 1 (LCNL1), mRNA.					
Homo sapiens	RefSeq	XM_942818.1	ILMN_46200	LOC647374	XM_942818.1	XM_942818.1		647374	89031881	XM_942818.1	LOC647374	XP_947911.1	ILMN_1706000	0003830324	S	506	TGCAGCACCCAATAGAGACCCCAACCCGCCCCCACACCGGGAGAAATAAC					PREDICTED: Homo sapiens hypothetical protein LOC647374 (LOC647374), mRNA.					
Homo sapiens	RefSeq	NM_001004725.1	ILMN_164804	OR4S1	NM_001004725.1	NM_001004725.1		256148	52317101	NM_001004725.1	OR4S1	NP_001004725.1	ILMN_1670149	0003440066	S	880	AATGCCATGAGGAAGCTGTTTAGGGTCAAGAGGAGCTTAGGGGAGAAGTG	11	+	48285230-48285279	11p11.2a	Homo sapiens olfactory receptor, family 4, subfamily S, member 1 (OR4S1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-100	OR11-100
Homo sapiens	RefSeq	NM_006207.1	ILMN_178894	PDGFRL	NM_006207.1	NM_006207.1		5157	5453871	NM_006207.1	PDGFRL	NP_006198.1	ILMN_1680339	0007200168	S	1276	GAGGCTGATGTCAAGCACCACACCCCAACCCCAGCGTCTCGTGAGTCCGA	8	+	17491584-17491633	8p22b	Homo sapiens platelet-derived growth factor receptor-like (PDGFRL), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with platelet activating factor to initiate a change in cell activity [goid 4992] [pmid 7898930] [evidence TAS];  [goid 5019] [pmid 7898930] [evidence TAS]	PRLTS; PDGRL	PRLTS; PDGRL
Homo sapiens	RefSeq	NM_002690.1	ILMN_15404	POLB	NM_002690.1	NM_002690.1		5423	4505930	NM_002690.1	POLB	NP_002681.1	ILMN_1767894	0006380338	S	1082	CCAGTGGAAATACCGGGAACCCAAGGACCGGAGCGAATGAGGCCTGTATC	8	+	42229136-42229175:42229176-42229185	8p11.21a	Homo sapiens polymerase (DNA directed), beta (POLB), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9207062] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10559261] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8978692] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11250913] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15725623] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [pmid 15725623] [evidence IDA]	The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 8168825] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8168825] [evidence TAS]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 8978692] [evidence EXP]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 11250913] [evidence EXP]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 8168825] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15520167] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 15725623] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC125976	MGC125976
Homo sapiens	RefSeq	NM_003259.2	ILMN_16951	ICAM5	NM_003259.2	NM_003259.2		7087	12545403	NM_003259.2	ICAM5	NP_003250.2	ILMN_1802524	0004610021	S	2637	TTCTACGTGCAGTCCACCGCCTGCAAGAAGGGCGAGTACAACGTGCAGGA	19	+	10268089-10268138	19p13.2c	Homo sapiens intercellular adhesion molecule 5, telencephalin (ICAM5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8995416] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8995416] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TLCN; TLN	TLN; TLCN
Homo sapiens	RefSeq	NM_002181.1	ILMN_529	IHH	NM_002181.2	NM_002181.2		3549	119392085	NM_002181.2	IHH	NP_002172.2	ILMN_1801953	0004390056	S	993	GCTCACAAAGCATGGGACACTGGTGGTGGAGGATGTGGTGGCATCCTGCT	2	-	219920122-219920171	2q35f	Homo sapiens Indian hedgehog homolog (Drosophila) (IHH), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence NAS]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues [goid 16539] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]	Interacting selectively with the patched (ptc) protein, a receptor for hedgehog proteins [goid 5113] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HHG2; BDA1	HHG2; BDA1
Homo sapiens	RefSeq	XR_001069.1	ILMN_37952	MGC27345	XR_001069.1	XR_001069.1		157247	89025473	XR_001069.1	MGC27345		ILMN_1660412	0002340168	A	3265	TCTCTGTCAGGATAGCAGTGGAGAGGTTTCGTGCCAGTGCCAGCTCCACC	7	-	127731780-127731829		PREDICTED: Homo sapiens hypothetical protein MGC27345 (MGC27345), misc RNA.					
Homo sapiens	RefSeq	NR_030392.1	ILMN_388241	MIR656	NR_030392.1	NR_030392.1		724026	262206299	NR_030392.1	MIR656		ILMN_3307992	0003800184	S	12	GCCTGTGAGGTGTTCACTTTCTATATGATGAATATTATACAGTCAACCTC				14q32.31a	Homo sapiens microRNA 656 (MIR656), microRNA.					
Homo sapiens	RefSeq	NM_080669.2	ILMN_22707	SLC46A1	NM_080669.3	NM_080669.3		113235	119120924	NM_080669.3	SLC46A1	NP_542400.2	ILMN_1673681	0004070348	S	1128	GGGGATGGTGGTCTTTGCCTTTGCCACTATCACGCCTCTCATGTTCACAG	17	-	26729339-26729339:26731634-26731682	17q11.2a	Homo sapiens solute carrier family 46 (folate transporter), member 1 (SLC46A1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 17475902] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 15884] [pmid 17129779] [evidence IDA]; The directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 15884] [pmid 17475902] [evidence IDA]; The directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of, within or between cells [goid 15886] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [evidence IEA]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [pmid 17129779] [evidence IDA]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [pmid 17475902] [evidence IDA]; Enables the directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of, within or between cells [goid 15232] [evidence IEA]	MGC9564; HCP1; PCFT	MGC9564
Homo sapiens	RefSeq	NM_018042.2	ILMN_454	SLFN12	NM_018042.2	NM_018042.2		55106	31542644	NM_018042.2	SLFN12	NP_060512.2	ILMN_1728236	0002070392	S	1619	GGACTCTGTCAGAAAGGGCTCACTGATCTTCTCTAGGAGCTGGTCTGTGG	17	-	30762915-30762964	17q12a	Homo sapiens schlafen family member 12 (SLFN12), mRNA.				FLJ10260; SLFN3	FLJ10260; SLFN3
Homo sapiens	RefSeq	XM_001716310.1	ILMN_347396	LOC100130100	XM_001716310.1	XM_001716310.1		100130100	169163723	XM_001716310.1	LOC100130100	XP_001716362.1	ILMN_3267319	0001190450	M	496	GACATGAAGCCTCCTCTATACCTTAACTATCTTTCCTTCACGGCATCCCC				2q14.1a	PREDICTED: Homo sapiens similar to hCG26659 (LOC100130100), mRNA.					
Homo sapiens	RefSeq	NM_182614.2	ILMN_163816	FAM70B	XM_001130122.1	XM_001130122.1		348013	113424478	XM_001130122.1	FAM70B	XP_001130122.1	ILMN_1792014	0005390066	A	79	TGGTTTGTGGGGTCTCTGCTGCTGGTGTCCGTCCTCATAGTCACCGTCGG				13q34d	PREDICTED: Homo sapiens family with sequence similarity 70, member B (FAM70B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				RP11-199F6.1; MGC20579
Homo sapiens	RefSeq	XM_939435.1	ILMN_163816	FAM70B	XM_001130122.1	XM_001130122.1		348013	113424478	XM_001130122.1	FAM70B	XP_001130122.1	ILMN_1723300	0003440563	A	73	TCGCTCTGGTTTGTGGGGTCTCTGCTGCTGGTGTCCGTCCTCATAGTCAC				13q34d	PREDICTED: Homo sapiens family with sequence similarity 70, member B (FAM70B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_014235.2	ILMN_19888	UBL4A	NM_014235.3	NM_014235.3		8266	145386555	NM_014235.3	UBL4A	NP_055050.1	ILMN_1742147	0005700324	S	2096	CAGCAGGTGAGCAATTTCACCCAGTGTCTTCTGCCTCCCTCTGCGTTGGT	X	-	153712215-153712264	Xq28g	Homo sapiens ubiquitin-like 4A (UBL4A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 2829204] [evidence TAS]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [pmid 2829204] [evidence TAS]	G6PD; GDX; DXS254E; DX254E; UBL4	GDX; DXS254E; UBL4
Homo sapiens	Unigene	Hs.127148	ILMN_76388	HS.127148	Hs.127148		Hs.127148		3095866	AA937755			ILMN_1835451	0004560392	S	392	GAACTTGAGTCCCGGTTCCTTAACCCAATGCCTGGATGCTAGAGATGTTC	9	+	21084260-21084309		oj05h07.s1 NCI_CGAP_Mel3 Homo sapiens cDNA clone IMAGE:1491325 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022727.4	ILMN_163924	TRMT2A	NM_022727.4	NM_022727.4		27037	51173877	NM_022727.4	TRMT2A	NP_073564.3	ILMN_1688728	0006220170	I	213	GCTCTGTGAGCACCTCCCCTCTGAGCACTTCCCTTGTGACAGGCCACTTC	22	-	20104506-20104555	22q11.21d	Homo sapiens TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) (TRMT2A), transcript variant 1, mRNA.				MGC102728	MGC102728
Homo sapiens	RefSeq	NM_022727.4	ILMN_163924	TRMT2A	NM_022727.4	NM_022727.4		27037	51173877	NM_022727.4	TRMT2A	NP_073564.3	ILMN_1671913	0001300402	A	2759	AACCAAGGAAGGGGCCATGCTGGGGTGCTGCTCAGCTGTTACAAAGGCAG	22	-	20099494-20099543	22q11.21d	Homo sapiens TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) (TRMT2A), transcript variant 1, mRNA.				MGC102728	MGC102728
Homo sapiens	RefSeq	NM_003262.3	ILMN_175564	SEC62	NM_003262.3	NM_003262.3		7095	61744441	NM_003262.3	SEC62	NP_003253.1	ILMN_1762003	0000110327	S	6299	TCCGTGAATCCCTTAGAGGTCTGTGAATTGTAGGTTAAGAACCCCTGCCC	3	+	169715919-169715968	3q26.2b	Homo sapiens SEC62 homolog (S. cerevisiae) (SEC62), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9020021] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9020021] [evidence TAS]	The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria [goid 6613] [pmid 9020021] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9020021] [evidence TAS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	HTP1; SEC62; FLJ32803; Dtrp1	HTP1; SEC62; FLJ32803; Dtrp1
Homo sapiens	RefSeq	XM_937527.1	ILMN_39133	LOC648480	XM_937527.1	XM_937527.1		648480	89060991	XM_937527.1	LOC648480	XP_942620.1	ILMN_1779467	0002100202	S	242	CCTGCATCTACAAGCCTTCTATGGAGAGTTGTTCAGTCAGTGACCATGGG					PREDICTED: Homo sapiens hypothetical protein LOC648480 (LOC648480), mRNA.					
Homo sapiens	RefSeq	NM_020713.1	ILMN_173427	ZNF512B	NM_020713.1	NM_020713.1		57473	34013527	NM_020713.1	ZNF512B	NP_065764.1	ILMN_1766346	0004810400	S	5831	GCCCTGGTCCCGAGTGGCGTGGGGACGGGCCATCACTGTATGTATTAAAA	20	-	62588093-62588142	20q13.33e	Homo sapiens zinc finger protein 512B (ZNF512B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC149845; GM632; KIAA1196; MGC149846	MGC149845; GM632; KIAA1196; MGC149846
Homo sapiens	RefSeq	NR_002750.2	ILMN_370797	SNORD44	NR_002750.2	NR_002750.2		26806	219689129	NR_002750.2	SNORD44		ILMN_3240848	0005550189	S	1	CCTGGATGATGATAAGCAAATGCTGACTGAACATGAAGGTCTTAATTAGC	1	-	173835116-173835165	1q25.1a	Homo sapiens small nucleolar RNA, C/D box 44 (SNORD44), small nuclear RNA.					
Homo sapiens	RefSeq	NM_032291.1	ILMN_23216	SGIP1	NM_032291.2	NM_032291.2		84251	116235471	NM_032291.2	SGIP1	NP_115667.2	ILMN_1664362	0006380239	S	4408	ACTCTCAGTTGGCCCCCTACAGCAGTCTGGTGTTGAAGTTTCTTTGAACG	1	+	66983070-66983119	1p31.3a	Homo sapiens SH3-domain GRB2-like (endophilin) interacting protein 1 (SGIP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]			FLJ43054; DKFZp761D221; FLJ33378; DKFZp686A16142	DKFZp761D221; DKFZp686A16142
Homo sapiens	RefSeq	NM_014707.1	ILMN_26338	HDAC9	NM_014707.1	NM_014707.1		9734	7662279	NM_014707.1	HDAC9	NP_055522.1	ILMN_1781173	0002480605	I	3023	TTCTGTGAGGGTGAACAGGAAATGCCTTGTGGAAACAGGAAGTCCAAGTG	7	+	18672838-18672887	7p21.1a	Homo sapiens histone deacetylase 9 (HDAC9), transcript variant 3, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12711221] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [pmid 10523670] [evidence NAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12711221] [evidence TAS]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 10523670] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp779K1053; HDAC; HDAC9FL; MITR; HD7; HDRP; HDAC9B; KIAA0744; HDAC7B; HDAC7	DKFZp779K1053; HDAC; HDAC9FL; MITR; HD7; HDRP; HDAC9B; KIAA0744; HDAC7B; HDAC7
Homo sapiens	RefSeq	NM_004752.1	ILMN_11418	GCM2	NM_004752.2	NM_004752.2		9247	142349178	NM_004752.2	GCM2	NP_004743.1	ILMN_1728449	0002650689	S	1939	GGACTTTTCCCATTAGAGCACCTTAGGGAATTTCACATCCCTAGAGGCTG	6	-	10981818-10981867	6p24.2a	Homo sapiens glial cells missing homolog 2 (Drosophila) (GCM2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9928992] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 15728199] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9928992] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The regulation of the levels, transport, and metabolism of phosphate ions within a cell or between a cell and its external environment [goid 30643] [pmid 15728199] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [pmid 15728199] [evidence IMP]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 15863676] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hGCMb; GCMB	hGCMb; GCMB
Homo sapiens	RefSeq	XR_017527.1	ILMN_183825	LOC644256	XR_017527.1	XR_017527.1		644256	113426945	XR_017527.1	LOC644256		ILMN_3286121	0002640414	M	1055	AGTGACTCCATTCTCTCTCCACAGGCAGCCCGAATGGGCATGCAGAGCCT	17	-	41692645-41692694	17q21.31e	PREDICTED: Homo sapiens misc_RNA (LOC644256), miscRNA.					
Homo sapiens	RefSeq	NM_000351.3	ILMN_25374	STS	NM_000351.4	NM_000351.4		412	153252272	NM_000351.4	STS	NP_000342.2	ILMN_1778956	0001580678	S	6052	GCTGAGTCCAGTCTCTCTCCCCTACTACAAGTCCCCATTGCTGTGGTCCC	X	+	7270734-7270783	Xp22.31e-p22.31d	Homo sapiens steroid sulfatase (microsomal), isozyme S (STS), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2668275] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 2668275] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 2668275] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 2668275] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 6957717] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 2668275] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2668275] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 6706] [pmid 6957717] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 9252398] [evidence TAS]	Catalysis of the reaction: 3-beta-hydroxyandrost-5-en-17-one 3-sulfate + H2O = 3-beta-hydroxyandrost-5-en-17-one + SO4(2-) (sulfate) [goid 4773] [pmid 2668275] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ARSC1; ASC; SSDD; ARSC; ES	ARSC1; ASC; SSDD; ARSC; ES
Homo sapiens	RefSeq	NM_020948.1	ILMN_23077	MIER1	NM_020948.2	NM_020948.2		57708	118130818	NM_020948.2	MIER1	NP_065999.1	ILMN_1682232	0004490452	S	4750	TTGCACTACTTTTTCAGTGGTTCTTGGTCCCCTTTACCACATCTTGGGTG	1	+	67226079-67226128	1p31.3a	Homo sapiens mesoderm induction early response 1 homolog (Xenopus laevis) (MIER1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	MGC150640; KIAA1610; MGC131940; ER1; MI-ER1; DKFZp781G0451; RP5-944N15.1; MGC150641; hMI-ER1	KIAA1610; MGC131940; MI-ER1; RP5-944N15.1; ER1; DKFZp781G0451; hMI-ER1
Homo sapiens	RefSeq	NM_002974.1	ILMN_181898	SERPINB4	NM_002974.2	NM_002974.2		6318	115529480	NM_002974.2	SERPINB4	NP_002965.1	ILMN_1782716	0006860424	S	1033	GCATGACCTGGAGCCACGGTCTCTCAGTATCTAAAGTCCTACACAAGGCC	18	-	61305129-61305178	18q21.33b	Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 4 (SERPINB4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence NAS]; Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [pmid 7589435] [evidence NAS]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 7589435] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	LEUPIN; SCCA-2; PI11; SCCA1; SCCA2	LEUPIN; SCCA-2; PI11; SCCA1; SCCA2
Homo sapiens	RefSeq	NM_182903.2	ILMN_24262	KIF9	NM_182902.2	NM_182902.2		64147	34222381	NM_182902.2	KIF9	NP_878905.1	ILMN_1762192	0002810689	A	1548	GACTCGGAGTCGCCCCTTTCTCTACCAAACCTGGGAAGAAAGCCAAGTCC	3	-	47261310-47261359	3p21.31g	Homo sapiens kinesin family member 9 (KIF9), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC104186	MGC104186
Homo sapiens	RefSeq	NM_014442.1	ILMN_5577	SIGLEC8	NM_014442.1	NM_014442.1		27181	7657571	NM_014442.1	SIGLEC8	NP_055257.1	ILMN_1730295	0000780369	S	2475	GCCGGGACCCCCTGCCCAACCTGTATGGCGGGTCTGTACTTATTTTGTTT	19	-	56646412-56646461	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 8 (SIGLEC8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10625619] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10625619] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 10625619] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 10625619] [evidence TAS]	SIGLEC8L; SIGLEC-8; SAF2; MGC59785	SIGLEC8L; SIGLEC-8; SAF2; MGC59785
Homo sapiens	RefSeq	XM_930694.1	ILMN_36253	LOC642477	XM_930694.1	XM_930694.1		642477	89037228	XM_930694.1	LOC642477	XP_935787.1	ILMN_1794711	0000380519	I	65	GTAGGAGGCAGGTCTCCGCGGTTCATCTGTGTTGCTCTAAATGACACTGT	14	-	18993093-18993123:18995240-18995258	14q11.1d	PREDICTED: Homo sapiens hypothetical protein LOC642477, transcript variant 2 (LOC642477), mRNA.					
Homo sapiens	RefSeq	XR_018292.2	ILMN_178268	LOC392522	XR_018292.2	XR_018292.2		392522	169216391	XR_018292.2	LOC392522		ILMN_3284084	0005090634	M	449	GTCATGGACTCTCGGCACTGCGCCCAGGCCCACTCCATCCAGATCATGAA				Xq23a	PREDICTED: Homo sapiens misc_RNA (LOC392522), miscRNA.					
Homo sapiens	RefSeq	NM_004593.1	ILMN_22721	SFRS10	NM_004593.1	NM_004593.1		6434	4759097	NM_004593.1	SFRS10	NP_004584.1	ILMN_1742798	0002490181	S	1875	CAGGTCCTTTGCTTACCAAAGGAGGCCCAATTTCACTCAAATGTTTTGAG	3	-	187117247-187117296	3q27.2b	Homo sapiens splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) (SFRS10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9546399] [evidence IDA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 9546399] [evidence IDA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10749975] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15169763] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9546399] [evidence TAS]	DKFZp686F18120; TRAN2B; TRA2B; Htra2-beta; TRA2-BETA; SRFS10	DKFZp686F18120; TRAN2B; TRA2B; Htra2-beta; TRA2-BETA; SRFS10
Homo sapiens	RefSeq	NM_001002841.1	ILMN_23542	MYL4	NM_001002841.1	NM_001002841.1		4635	50845427	NM_001002841.1	MYL4	NP_001002841.1	ILMN_1716062	0002690446	I	5	CTGGCTGCTCCGGCATATTTGAGAAGGTCTGTTTCCCTGGTCCTTCTGGG	17	+	42641431-42641480	17q21.32a	Homo sapiens myosin, light chain 4, alkali; atrial, embryonic (MYL4), transcript variant 1, mRNA.	A filament of myosin found in a muscle cell of any type [goid 5859] [evidence NAS]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [pmid 14985854] [evidence IMP]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [pmid 16675844] [evidence IMP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence NAS]; Any process that activates or increases the rate of ATP hydrolysis by an ATPase [goid 32781] [pmid 9738905] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [pmid 16675844] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [pmid 14985854] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [pmid 9180271] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence NAS]; Interacting selectively with a heavy chain of a myosin II complex [goid 32038] [pmid 16675844] [evidence NAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 9738905] [evidence IMP]	ALC1; AMLC; GT1; PRO1957	ALC1; AMLC; GT1; PRO1957
Homo sapiens	RefSeq	XM_939387.1	ILMN_42423	LOC650298	XM_939387.1	XM_939387.1		650298	89047477	XM_939387.1	LOC650298	XP_944480.1	ILMN_1737991	0000670010	S	278	AGGACCAAACACCCCCACCCCGATTGAGACCTGCGGGTGCTGCTCTACAA					PREDICTED: Homo sapiens similar to 40S ribosomal protein S26 (LOC650298), mRNA.					
Homo sapiens	RefSeq	XM_495891.2	ILMN_31389	LOC440059	XM_495891.2	XM_495891.2		440059	89034193	XM_495891.2	LOC440059	XP_495891.2	ILMN_1721812	0004210468	S	397	GGAGCTTCTGAGTATCCGAAAGACTTGAGTACCCGTCTGAATTCCTCAGG	11	-	89270446-89270495	11q14.3b	PREDICTED: Homo sapiens similar to surface glycoprotein, Ig superfamily member (LOC440059), mRNA.					
Homo sapiens	RefSeq	NR_001297.1	ILMN_5198	PCDHGB8P	NR_001297.1	NR_001297.1		56120	30172539	NR_001297.1	PCDHGB8P		ILMN_1803296	0003520286	S	1907	TCTGCGCCGCTACGCTTCACCTAGTCTTCGCAGACAGCCTGCAGGAGGCA	5	+	140787943-140787992	5q31.3c	Homo sapiens protocadherin gamma subfamily B, 8 pseudogene (PCDHGB8P), non-coding RNA.				PCDH-PSI3	PCDH-PSI3
Homo sapiens	RefSeq	XM_945644.1	ILMN_138814	MYRIP	XM_945644.1	XM_945644.1		25924	88968738	XM_945644.1	MYRIP	XP_950737.1	ILMN_1657230	0006330113	I	1096	GAGCCCAGCTGCCATGCCCTATACTCTTAGTTTGGCCAGATAGTGTCCCC				3p22.1c	PREDICTED: Homo sapiens myosin VIIA and Rab interacting protein, transcript variant 3 (MYRIP), mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11964381] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11964381] [evidence NAS]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_945644.1	ILMN_138814	MYRIP	XM_945644.1	XM_945644.1		25924	88968738	XM_945644.1	MYRIP	XP_950737.1	ILMN_1763083	0004390368	A	492	GGCCATTGAGGAAGCAATTTCCAAAGCAGAGGCATATGGGGACAGCCTGG				3p22.1c	PREDICTED: Homo sapiens myosin VIIA and Rab interacting protein, transcript variant 3 (MYRIP), mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11964381] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11964381] [evidence NAS]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_052872.3	ILMN_2831	IL17F	NM_052872.3	NM_052872.3		112744	57863305	NM_052872.3	IL17F	NP_443104.1	ILMN_2188247	0005360682	S	418	TCTCCATGAATTCCGTTCCCATCCAGCAAGAGACCCTGGTCGTCCGGAGG	6	-	52209783-52209832	6p12.2a	Homo sapiens interleukin 17F (IL17F), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11574464] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways involving proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans [goid 6029] [pmid 11574464] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 11591732] [evidence IDA]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [pmid 11591732] [evidence IDA]; The chemical reactions and pathways resulting in the formation of the cytokine lymphotoxin A [goid 42109] [pmid 11591732] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45076] [pmid 11591732] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45408] [pmid 11574464] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-8 [goid 45414] [pmid 11574464] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of granulocyte macrophage colony-stimulating factor [goid 45423] [pmid 11574464] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [pmid 11574464] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 11591732] [evidence IDA]; Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [pmid 11574464] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11574464] [evidence IDA]	ML-1; ML1; IL-17F	ML-1; ML1; IL-17F
Homo sapiens	RefSeq	NM_001008779.1	ILMN_7192	SPDYA	NM_001008779.1	NM_001008779.1		245711	56961677	NM_001008779.1	SPDYA	NP_001008779.1	ILMN_1707769	0005310692	I	955	ATTTATATACTCCAACAATATGAGTTAAATTAATCTTGAAACTTTCTCCC	2	+	28916926-28916975	2p23.2a	Homo sapiens speedy homolog A (Xenopus laevis) (SPDYA), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11980914] [evidence IDA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 11980914] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 12839962] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11980914] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of CDK activity [goid 45737] [evidence IEA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 12839962] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 11980914] [evidence IPI]	MGC57218; MGC110856; Ringo3; SPY1; SPDY1	MGC57218; MGC110856; Ringo3; SPY1; SPDY1
Homo sapiens	RefSeq	NM_001008779.1	ILMN_7192	SPDYA	NM_001008779.1	NM_001008779.1		245711	56961677	NM_001008779.1	SPDYA	NP_001008779.1	ILMN_2366587	0001030070	A	772	ACAGCAGGGGTGACAGAAAAACATTCTCAGGACTCATACAACTCACTGTC	2	+	28916743-28916792	2p23.2a	Homo sapiens speedy homolog A (Xenopus laevis) (SPDYA), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11980914] [evidence IDA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 11980914] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 12839962] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11980914] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of CDK activity [goid 45737] [evidence IEA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 12839962] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 11980914] [evidence IPI]	MGC57218; MGC110856; Ringo3; SPY1; SPDY1	MGC57218; MGC110856; Ringo3; SPY1; SPDY1
Homo sapiens	Unigene	Hs.563438	ILMN_116303	HS.563438	Hs.563438		Hs.563438		19732762	BQ007862			ILMN_1869146	0001940392	S	588	CTCCGAATGCCACAATGCTAACCCAAAATTACTTGTCCTTCCTGGGCCTG	7	-	130447136-130447185		UI-H-EI0-ayi-c-19-0-UI.s1 NCI_CGAP_EI0 Homo sapiens cDNA clone IMAGE:5839050 3, mRNA sequence					
Homo sapiens	RefSeq	XM_928657.1	ILMN_46385	C6ORF94	XM_941265.2	XM_941265.2		153918	113418236	XM_941265.2	C6orf94	XP_946358.1	ILMN_1716434	0003120193	A	863	TGGCCACGAATGAAGTCCCAACCAAGTCAGGATTAGCTATGGACCCTGCT				6q24.2b	PREDICTED: Homo sapiens chromosome 6 open reading frame 94 (C6orf94), mRNA.					
Homo sapiens	RefSeq	XM_928167.2	ILMN_40836	LOC645137	XM_928167.2	XM_928167.2		645137	113425463	XM_928167.2	LOC645137	XP_933260.2	ILMN_3240135	0000160463	S	3326	AGACCAAATAATGCGGCTAATTAACAGTGGTCCGATTTCTAGCCCGTGGG	15	-	28034-28083		PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a, 8G (LOC645137), mRNA.					
Homo sapiens	RefSeq	NM_178554.3	ILMN_17518	KY	NM_178554.4	NM_178554.4		339855	148806931	NM_178554.4	KY	NP_848649.3	ILMN_1748178	0003400128	S	2190	GCCACAGGAGCTGTGATCTTTGTGTTCTGAAGGCTTCACTCAGGTGTGGC	3	-	135804919-135804968	3q22.2a	Homo sapiens kyphoscoliosis peptidase (KY), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	FLJ33207	FLJ33207
Homo sapiens	RefSeq	XM_942022.1	ILMN_46241	LOC652534	XM_942022.1	XM_942022.1		652534	88948937	XM_942022.1	LOC652534	XP_947115.1	ILMN_1811699	0005690468	S	1037	TCCTCATGTTTTGCACCACCAACATCTTTGGCAGTCTGAAGCCTATGGAC					PREDICTED: Homo sapiens similar to CG14616-PD, isoform D (LOC652534), mRNA.					
Homo sapiens	RefSeq	NM_004056.4	ILMN_164204	CA8	NM_004056.4	NM_004056.4		767	56121820	NM_004056.4	CA8	NP_004047.3	ILMN_1696615	0001850097	S	2044	AGGTGCCACTAGCAGATGTAAGCGTATACTTAGTTGCCGTTAGATGTGAC	8	-	61264161-61264210	8q12.1d	Homo sapiens carbonic anhydrase VIII (CA8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [pmid 8977131] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CALS; MGC99509; CA-VIII; CARP; MGC120502	CALS; MGC120502; MGC99509; CA-VIII; CARP
Homo sapiens	RefSeq	XM_926821.1	ILMN_32736	LOC643501	XM_926821.1	XM_926821.1		643501	89041161	XM_926821.1	LOC643501	XP_931914.1	ILMN_1740613	0007610397	S	2686	GGAGGTTTACTTAGAGTCATTGAGAGTTATATGCCTTCGGGCCACCTGAC	17	-	6479632-6479678:6481147-6481149		PREDICTED: Homo sapiens similar to Collagen alpha 1(I) chain precursor (LOC643501), mRNA.					
Homo sapiens	RefSeq	NM_024959.2	ILMN_164449	SLC24A6	NM_024959.2	NM_024959.2		80024	39995085	NM_024959.2	SLC24A6	NP_079235.2	ILMN_1701655	0002360376	S	2794	GGCCTGCGAGCTGGGAAAGGACAGATGAGGGGACCTCGTGCCTTCTTGCT	12	-	113736703-113736752	12q24.13b	Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 6 (SLC24A6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]	FLJ22233; NCLX; NCKX6	FLJ22233; NCLX; NCKX6
Homo sapiens	RefSeq	NM_030901.1	ILMN_3207	OR7A17	NM_030901.1	NM_030901.1		26333	13775161	NM_030901.1	OR7A17	NP_112163.1	ILMN_1704485	0007510133	S	587	ACATGGGGATGTATTTTGCAGCAGGGCTGCTGGCTGGTGGTCCCCTTGTG	19	-	14991531-14991580	19p13.12b	Homo sapiens olfactory receptor, family 7, subfamily A, member 17 (OR7A17), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	HTPCRX19; BC85395_4; MGC126636	HTPCRX19; BC85395_4; MGC126636
Homo sapiens	RefSeq	NM_004034.1	ILMN_14787	ANXA7	NM_004034.1	NM_004034.1		310	4809278	NM_004034.1	ANXA7	NP_004025.1	ILMN_1703791	0006330044	A	1880	ACTGAAAGCTCTGCCTTCCGGAATCCCTCTAAGTCTGCTTGATAGAGTGG	10	-	74805453-74805502	10q22.2a	Homo sapiens annexin A7 (ANXA7), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IEA]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 9651] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of water within a cell [goid 9992] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 9651] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of water within a cell [goid 9992] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	ANX7; SNX	ANX7; SNX
Homo sapiens	RefSeq	NM_004034.1	ILMN_14787	ANXA7	NM_004034.1	NM_004034.1		310	4809278	NM_004034.1	ANXA7	NP_004025.1	ILMN_1662322	0006180671	I	511	TTTTCTTCCTATCCTGTTTTCTCTCCTGTTTCTTTGGATTATAGCAGTGA	10	-	74818176-74818178:74825808-74825854	10q22.2a	Homo sapiens annexin A7 (ANXA7), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [evidence IEA]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 9651] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of water within a cell [goid 9992] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment [goid 9651] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of water within a cell [goid 9992] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	ANX7; SNX	ANX7; SNX
Homo sapiens	RefSeq	NR_027013.1	ILMN_387226	BEYLA	NR_027013.1	NR_027013.1		497634	224177552	NR_027013.1	BEYLA		ILMN_3311150	0000610196	I	1118	CTGGCCACAGGTGATGTTGTGCCATATAACTGAGACCGTATCAAAAGCCT	8	+	47761060-47761109		Homo sapiens hypothetical LOC497634 (BEYLA), transcript variant B, non-coding RNA.					
Homo sapiens	RefSeq	NR_027013.1	ILMN_387226	BEYLA	NR_027013.1	NR_027013.1		497634	224177552	NR_027013.1	BEYLA		ILMN_3307987	0000840327	A	1357	AATGGAATCGAGGGCACTTTTACATATCACTGAGACCAGCGCCCAGCTGA	8	+	47765799-47765848		Homo sapiens hypothetical LOC497634 (BEYLA), transcript variant B, non-coding RNA.					
Homo sapiens	RefSeq	NM_016940.1	ILMN_13302	RWDD2B	NM_016940.1	NM_016940.1		10069	8393017	NM_016940.1	RWDD2B	NP_058636.1	ILMN_1698233	0001410189	S	1342	CCAGCCATTCCCAACCCCCTTCTCCCTTACCTGCCTTCACTAAAGAACCC	21	-	29300271-29300320	21q21.3c	Homo sapiens RWD domain containing 2B (RWDD2B), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C21orf6; GL011	C21orf6; GL011
Homo sapiens	RefSeq	NM_006675.3	ILMN_30091	TSPAN9	NM_006675.3	NM_006675.3		10867	57232744	NM_006675.3	TSPAN9	NP_006666.1	ILMN_1729453	0007570196	S	4200	CTTTCTGCTTGCATTGCCGTATCTGTGCGTTCCTTCATCCTGGTCCTGGC	12	+	3265746-3265795	12p13.33a-p13.32b	Homo sapiens tetraspanin 9 (TSPAN9), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10719184] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10719184] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			PP1057; NET-5	PP1057; NET-5
Homo sapiens	RefSeq	XM_929401.1	ILMN_182701	FABP9	NM_001080526.1	NM_001080526.1		646480	122937489	NM_001080526.1	FABP9	NP_001073995.1	ILMN_1669540	0000870291	S	121	GTAACTATTAGTGTTGATGGGAAAATGATGACCATAAGAACAGAAAGTTC	8	-	82534030-82534079	8q21.13b	Homo sapiens fatty acid binding protein 9, testis (FABP9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	PERF15; PERF; T-FABP	
Homo sapiens	RefSeq	NM_001080526.1	ILMN_182701	FABP9	NM_001080526.1	NM_001080526.1		646480	122937489	NM_001080526.1	FABP9	NP_001073995.1	ILMN_2159172	0000730082	S	84	CGCAGCCCGGAACATGGCAGGGTTAGTGAAACCGACAGTAACTATTAGTG	8	-	82534067-82534116	8q21.13b	Homo sapiens fatty acid binding protein 9, testis (FABP9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	PERF15; PERF; T-FABP	PERF15; PERF; T-FABP
Homo sapiens	RefSeq	XM_926662.1	ILMN_35443	LOC643330	XM_926662.2	XM_926662.2		643330	113411656	XM_926662.2	LOC643330	XP_931755.2	ILMN_1683697	0006110670	S	151	AAGGGCAGCCATCGAGTGGACCTCAAGAAGTGTGGCCCTTGGGCACTCAA	1	-	211668902-211668951	1q32.3d	PREDICTED: Homo sapiens similar to ribosomal protein L31 (LOC643330), mRNA.					
Homo sapiens	RefSeq	NM_001032363.1	ILMN_171366	C1ORF151	NM_001032363.1	NM_001032363.1		440574	73912719	NM_001032363.1	C1orf151	NP_001027535.1	ILMN_2064311	0002810538	S	2259	CAGGCGTGAGCCACCGCACCCAGCCTCCTATTTGCTTTAAAAGTAATTTC	1	+	19827431-19827480	1p36.13a	Homo sapiens chromosome 1 open reading frame 151 (C1orf151), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP5-1056L3.2; FLJ36999	RP5-1056L3.2; FLJ36999
Homo sapiens	RefSeq	XM_931426.1	ILMN_30710	LOC643234	XM_931426.1	XM_931426.1		643234	88998567	XM_931426.1	LOC643234	XP_936519.1	ILMN_1767084	0000730603	S	1551	CTAAACGGCCAGACCCAGCCCCTAGGGCGTGGCGACCGGGCTCGACGCGC	6	+	163754919-163754942:163755043-163755068		PREDICTED: Homo sapiens hypothetical protein LOC643234 (LOC643234), mRNA.					
Homo sapiens	RefSeq	NM_178861.3	ILMN_169363	RNF113B	NM_178861.4	NM_178861.4		140432	110349795	NM_178861.4	RNF113B	NP_849192.1	ILMN_1768795	0000150091	S	1027	GGGGAGAAGCAGCCTGTTGAGTAAGATGAGAGAGATGACAGTCTTCCTGC	13	-	98828340-98828389	13q32.2b	Homo sapiens ring finger protein 113B (RNF113B), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF183L1; RNF161; bA10G5.1; MGC26599	ZNF183L1; RNF161; bA10G5.1; MGC26599
Homo sapiens	RefSeq	NM_001004689.1	ILMN_178713	OR2M3	NM_001004689.1	NM_001004689.1		127062	52317199	NM_001004689.1	OR2M3	NP_001004689.1	ILMN_2140191	0005870551	S	774	GTACATACGGCCCACATCTGATCGCTCCCCAACACAGGACAAGATGGTGT	1	+	246433766-246433815	1q44f	Homo sapiens olfactory receptor, family 2, subfamily M, member 3 (OR2M3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2M3P; OR1-54; OST003; OR2M6	OR2M3P; OR1-54; OST003; OR2M6
Homo sapiens	Unigene	Hs.496730	ILMN_96887	HS.496730	Hs.496730		Hs.496730		8162544	AW972698			ILMN_1895042	0006560670	S	136	CCGGTGTGCTGCTGAAGTTGTTAAAATGAACTCCTGACTTCTCCAGAGCC	X	+	125363354-125363403		EST384789 MAGE resequences, MAGL Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NR_024440.1	ILMN_372184	LOC729609	NR_024440.1	NR_024440.1		729609	212549757	NR_024440.1	LOC729609		ILMN_3249715	0003290139	S	483	GGGTATGGGGTATGCACCTATAGTCCCAGCTACTCAAAGACTGAAGCGAG	X	-	20005030-20005079		Homo sapiens hypothetical protein LOC729609 (LOC729609), non-coding RNA.					
Homo sapiens	RefSeq	NM_173656.1	ILMN_6902	ZNF619	NM_173656.1	NM_173656.1		285267	27734906	NM_173656.1	ZNF619	NP_775927.1	ILMN_1698048	0000990450	S	1852	TGCTCTGCCCTAGCCCCACCAGGGCCTCCCTTATCTTCTTCACATGCAGT	3	+	40504533-40504582	3p22.1c	Homo sapiens zinc finger protein 619 (ZNF619), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ90764	FLJ90764
Homo sapiens	RefSeq	NM_173487.1	ILMN_307853	C4ORF33	NM_001099783.1	NM_001099783.1		132321	153251888	NM_001099783.1	C4orf33	NP_001093253.1	ILMN_1812701	0001850110	S	1327	TGATGATAGATACCAGAACAGTGGCTGCTTAGAGTGAGGGCAGGGAATTC	4	+	130033581-130033630	4q28.2b	Homo sapiens chromosome 4 open reading frame 33 (C4orf33), transcript variant 2, mRNA.				FLJ33703	FLJ33703
Homo sapiens	RefSeq	NM_000075.2	ILMN_2567	CDK4	NM_000075.2	NM_000075.2		1019	16936531	NM_000075.2	CDK4	NP_000066.1	ILMN_1689001	0007380110	S	1189	GGACACTGAGAGGGCAATCTTTGCCTTTATCTCTGAGGCTATGGAGGGTC	12	-	58142207-58142256	12q14.1a	Homo sapiens cyclin-dependent kinase 4 (CDK4), mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16109376] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9190208] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16782892] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9106657] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 7603984] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [pmid 17420273] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 17420273] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9106657] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11896535] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17909018] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15558030] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PSK-J3; CMM3; MGC14458	PSK-J3; CMM3; MGC14458
Homo sapiens	RefSeq	NM_003879.3	ILMN_4321	CFLAR	NM_003879.3	NM_003879.3		8837	21361768	NM_003879.3	CFLAR	NP_003870.3	ILMN_1789830	0001240593	S	2171	GTGCCTACGAATAGCCACTGCATACCAACCTGGGCAATATAGCAAGATCC	2	+	201737217-201737260	2q33.1f	Homo sapiens CASP8 and FADD-like apoptosis regulator (CFLAR), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9217161] [evidence TAS]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 9208847] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11741985] [evidence IPI]	I-FLICE; CASP8AP1; CASH; c-FLIPL; Casper; FLAME1; CLARP; USURPIN; FLIP; c-FLIPR; c-FLIPS; c-FLIP; MRIT; FLAME; FLAME-1	I-FLICE; CASP8AP1; CASH; c-FLIPL; Casper; FLAME1; CLARP; USURPIN; FLIP; c-FLIPR; c-FLIPS; c-FLIP; MRIT; FLAME; FLAME-1
Homo sapiens	Unigene	Hs.543649	ILMN_107208	HS.543649	Hs.543649		Hs.543649		6031081	AW076083			ILMN_1827907	0004860228	S	328	GTCTGGCTTGTTCACCACTGTGACCATTAGCACCTAGCACAGTGCCTGGC	4	-	37450629-37450678		xa84b10.x1 NCI_CGAP_CML1 Homo sapiens cDNA clone IMAGE:2573467 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014992.1	ILMN_183695	DAAM1	NM_014992.1	NM_014992.1		23002	21071076	NM_014992.1	DAAM1	NP_055807.1	ILMN_1787251	0001710735	S	3631	GAGTGTGGCTCATTTTCTTTCCCCGAACGCCATGACTGTTCAGAAGCACA	14	+	58905599-58905648	14q23.1b	Homo sapiens dishevelled associated activator of morphogenesis 1 (DAAM1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	FLJ41657; KIAA0666	FLJ41657; KIAA0666
Homo sapiens	RefSeq	NM_014992.1	ILMN_183695	DAAM1	NM_014992.1	NM_014992.1		23002	21071076	NM_014992.1	DAAM1	NP_055807.1	ILMN_2046470	0004490010	S	4025	TGGACATCAATTTTTTCCCCTGATTTCATCAAGTTATCTCTGCCAAGTGC	14	+	58905993-58906042	14q23.1b	Homo sapiens dishevelled associated activator of morphogenesis 1 (DAAM1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	FLJ41657; KIAA0666	FLJ41657; KIAA0666
Homo sapiens	RefSeq	NM_145074.2	ILMN_12587	HTRA2	NM_145074.2	NM_145074.2		27429	73747818	NM_145074.2	HTRA2	NP_659540.1	ILMN_1785574	0006940209	A	1466	AATCAGTGGGTCCCAGCGGCGCTACATTGGGGTGATGATGCTGACCCTGA	2	+	74612504-74612553	2p13.1b	Homo sapiens HtrA serine peptidase 2 (HTRA2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10971580] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 15044455] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10995577] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10644717] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10873535] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10971580] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 10873535] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 10644717] [evidence NAS]	PARK13; OMI; PRSS25	PARK13; OMI; PRSS25
Homo sapiens	Unigene	Hs.538602	ILMN_104006	HS.538602	Hs.538602		Hs.538602		31449015	CD517297			ILMN_1841564	0000270154	S	386	CAGTGGCAGGGAGAACAGGGATGGGGACAGCAGCAAGAAGAGGTTAGAAG	10	+	10683273-10683322		AGENCOURT_14378000 NIH_MGC_181 Homo sapiens cDNA clone IMAGE:30399590 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001721580.1	ILMN_352921	LOC100130131	XM_001721580.1	XM_001721580.1		100130131	169161054	XM_001721580.1	LOC100130131	XP_001721632.1	ILMN_3273706	0000510639	M	97	GTAGGTCTGCCAAGCAGTATTGGATTCAACACATCTTCTCACCTTCTCTT	1	+	142028804-142028853	1q12p	PREDICTED: Homo sapiens hypothetical LOC100130131 (LOC100130131), mRNA.					
Homo sapiens	RefSeq	NM_001039503.2	ILMN_38726	POL3S	NM_001039503.2	NM_001039503.2		339105	126090574	NM_001039503.2	POL3S	NP_001034592.1	ILMN_2133187	0000870711	S	1844	GTGTCTGTGGACACTCCCACACCCAACTCTGCTACCAAGCAGGCGTCTCA	16	-	31094879-31094928	16p11.2c	Homo sapiens polyserase 3 (POL3S), mRNA.				FLJ00289; UNQ308	FLJ00289; UNQ308
Homo sapiens	RefSeq	NM_017978.1	ILMN_16436	ANKHD1	NM_017978.1	NM_017978.1		54882	46519150	NM_017978.1	ANKHD1	NP_060448.1	ILMN_1778304	0007150026	A	560	CTAGAAGCATTGCTAGAAGCAGCAGCTTTTGCAGATCCTGAGGTACTCCG	5	+	139781558-139781607	5q31.3a-q31.3b	Homo sapiens ankyrin repeat and KH domain containing 1 (ANKHD1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	VBARP; MASK	VBARP; MASK
Homo sapiens	RefSeq	XM_372707.3	ILMN_34929	LOC390880	XM_372707.3	XM_372707.3		390880	89052387	XM_372707.3	LOC390880	XP_372707.3	ILMN_1722154	0002370113	A	1066	TTGCGGCCAGAAAGCGCCGCGTCACGGATGATGGATAACTGCATTGACGT	19	+	8660337-8660386		PREDICTED: Homo sapiens similar to nuclear factor, interleukin 3 regulated (LOC390880), mRNA.					
Homo sapiens	RefSeq	NM_002191.2	ILMN_10181	INHA	NM_002191.2	NM_002191.2		3623	9257223	NM_002191.2	INHA	NP_002182.1	ILMN_1756443	0006660553	S	1283	GCCACGCCCCCACCATCATCAGCTGGGAGGAAAGGCAGAGTTGGGAAATA	2	+	220148531-220148580	2q35f	Homo sapiens inhibin, alpha (INHA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12456957] [evidence TAS]; Heterodimeric hormone composed of an inhibin alpha subunit complexed with an inhibin beta-A subunit [goid 43512] [pmid 7890768] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10865214] [evidence TAS]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [pmid 9166111] [evidence NAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 8267637] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 12456957] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 12456957] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 12456957] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10320815] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [pmid 10320815] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 12456957] [evidence TAS]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [pmid 1310063] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 9032295] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 12456957] [evidence TAS]; The chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 42541] [pmid 1310063] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45077] [pmid 12456957] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell differentiation [goid 45578] [pmid 12456957] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of macrophage differentiation [goid 45650] [pmid 12456957] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 12456957] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the regulated release of follicle-stimulating hormone [goid 46881] [pmid 12456957] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of follicle-stimulating hormone [goid 46882] [pmid 3267209] [evidence NAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 12456957] [evidence TAS]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 12456957] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 12324653] [evidence TAS]; Acts to negatively regulate the activity of activin, a nonsteroidal regulator synthesized in the pituitary gland and gonads that stimulates the secretion of follicle-stimulating hormone [goid 17106] [pmid 7890768] [evidence IDA]		
Homo sapiens	RefSeq	NM_144982.3	ILMN_164652	ZFC3H1	NM_144982.4	NM_144982.4		196441	87116682	NM_144982.4	ZFC3H1	NP_659419.3	ILMN_1803590	0003940451	S	6509	CGGTTGGATAAATGAACTTCCTGTTTGGCCTGCTTCTAGGCCCTGCCAGA	12	-	72003978-72004027	12q21.1a	Homo sapiens zinc finger, C3H1-type containing (ZFC3H1), mRNA.				MGC90200; PSRC2; MGC23401; DKFZp686A0722; KIAA0546	MGC90200; KIAA0546; MGC23401; DKFZp686A0722
Homo sapiens	RefSeq	NM_144982.4	ILMN_164652	ZFC3H1	NM_144982.4	NM_144982.4		196441	87116682	NM_144982.4	ZFC3H1	NP_659419.3	ILMN_3244096	0001980044	S	6669	CCTGACTCACTTGACACTCTCTGATGCCTGAGAGATTCCTGTTTGGGATT	12	-	72003818-72003867	12q21.1a	Homo sapiens zinc finger, C3H1-type containing (ZFC3H1), mRNA.				MGC90200; PSRC2; MGC23401; DKFZp686A0722; KIAA0546	MGC90200; KIAA0546; PSRC2; MGC23401; DKFZp686A0722
Homo sapiens	RefSeq	NM_001801.2	ILMN_176935	CDO1	NM_001801.2	NM_001801.2		1036	56786146	NM_001801.2	CDO1	NP_001792.2	ILMN_2234187	0004640491	S	1499	TCCCCAGACCACAACAAACCAAAACATAAACTCATGTCTGTGTCCCATGG	5	-	115168394-115168443	5q22.3b	Homo sapiens cysteine dioxygenase, type I (CDO1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12110289] [evidence TAS]	The chemical reactions and pathways resulting in the formation of amino acids containing sulfur, comprising cysteine, methionine and selenocysteine [goid 97] [pmid 12110289] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12110289] [evidence TAS]; The chemical reactions and pathways resulting in the formation of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats [goid 42412] [pmid 12871209] [evidence TAS]; The chemical reactions and pathways involving L-cysteine, the levorotatory isomer of 2-amino-3-mercaptopropanoic acid [goid 46439] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 12110289] [evidence TAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-cysteine + O2 = 3-sulfinoalanine [goid 17172] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001801.2	ILMN_176935	CDO1	NM_001801.2	NM_001801.2		1036	56786146	NM_001801.2	CDO1	NP_001792.2	ILMN_1753931	0003780315	S	885	GCAACTTCGGGCTCGCTGGAGAACAACTAAGGGGCACCAAACCCTCTGAG	5	-	115169008-115169028:115169029-115169057	5q22.3b	Homo sapiens cysteine dioxygenase, type I (CDO1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12110289] [evidence TAS]	The chemical reactions and pathways resulting in the formation of amino acids containing sulfur, comprising cysteine, methionine and selenocysteine [goid 97] [pmid 12110289] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12110289] [evidence TAS]; The chemical reactions and pathways resulting in the formation of taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats [goid 42412] [pmid 12871209] [evidence TAS]; The chemical reactions and pathways involving L-cysteine, the levorotatory isomer of 2-amino-3-mercaptopropanoic acid [goid 46439] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 12110289] [evidence TAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-cysteine + O2 = 3-sulfinoalanine [goid 17172] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_175729.1	ILMN_25751	SSX4	NM_175729.1	NM_175729.1		6759	28559012	NM_175729.1	SSX4	NP_783856.1	ILMN_2322346	0002260093	A	1032	CGATTCCGTTGTATCAGTCACTGACAGTTAATAAACCTTTGCAAACGTTC	X	+	48137680-48137729	Xp11.23d	Homo sapiens synovial sarcoma, X breakpoint 4 (SSX4), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC119056; MGC12411	MGC119056; MGC12411
Homo sapiens	RefSeq	XM_933702.1	ILMN_25751	SSX4	NM_175729.1	NM_175729.1		6759	28559012	NM_175729.1	SSX4	NP_783856.1	ILMN_1694952	0001050458	A	340	TGAACGTCCTCAGATGACTTTCGGCAGCCTCCAGAGAATCTTCCCGAAGG	X	+	48131698-48131746:48136255-48136255	Xp11.23d	Homo sapiens synovial sarcoma, X breakpoint 4 (SSX4), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC119056; MGC12411	
Homo sapiens	RefSeq	NM_139280.1	ILMN_12329	ORMDL3	NM_139280.1	NM_139280.1		94103	27544926	NM_139280.1	ORMDL3	NP_644809.1	ILMN_1662174	0001500112	S	1809	TGCAGAGAAGAAAGTGAGGCCGGGAGCCTGAGCCTGGGCTGGAGCCTTCT	17	-	38077546-38077595	17q12c	Homo sapiens ORM1-like 3 (S. cerevisiae) (ORMDL3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_001481.1	ILMN_26809	GAS8	NM_001481.1	NM_001481.1		2622	4503916	NM_001481.1	GAS8	NP_001472.1	ILMN_1783798	0006860291	S	2936	ACCTGTCAGACTTGGGTGAGCAGACACAGTGAGGCTGTTAGGTCCTGCAG	16	+	88638631-88638680	16q24.3b	Homo sapiens growth arrest-specific 8 (GAS8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 10969087] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9790751] [evidence TAS]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC138326; GAS11	MGC138326; GAS11
Homo sapiens	RefSeq	NM_001030009.1	ILMN_27395	RPS15A	NM_001030009.1	NM_001030009.1		6210	71772414	NM_001030009.1	RPS15A	NP_001025180.1	ILMN_1787949	0003360608	A	20	GCGCCGCCACAATGGTGCGCATGAATGTCCTGGCAGATGCTCTCAAGAGT	16	-	18800396-18800435:18800436-18800440:18801632-18801636	16p12.3b	Homo sapiens ribosomal protein S15a (RPS15A), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15108328] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 15108328] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 15108328] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [pmid 15108328] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9582194] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 9582194] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	S15a; FLJ27457; MGC111208	S15a; FLJ27457; MGC111208
Homo sapiens	Unigene	Hs.559665	ILMN_113777	HS.559665	Hs.559665		Hs.559665		20361923	BQ186372			ILMN_1839665	0001030367	S	424	GCGACCTTAGTCCAACTCCTAGTAACACATGATTGTGGAATGTGCCCTCC	1	-	65286682-65286731		UI-E-EJ1-ajr-a-07-0-UI.r1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajr-a-07-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_019841.3	ILMN_138063	TRPV5	NM_019841.3	NM_019841.3		56302	21361832	NM_019841.3	TRPV5	NP_062815.2	ILMN_1738674	0007650717	S	2824	GTCAGGACCCATTTCTCTTCTGCCCCACGCAGCCCCTAGAAAGTAGTAAG	7	-	142315467-142315516	7q34f	Homo sapiens transient receptor potential cation channel, subfamily V, member 5 (TRPV5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15489237] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 15665527] [evidence TAS]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence ISS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	ECAC1; CAT2	ECAC1; CAT2
Homo sapiens	RefSeq	NM_000338.1	ILMN_1775	SLC12A1	NM_000338.2	NM_000338.2		6557	134254458	NM_000338.2	SLC12A1	NP_000329.2	ILMN_1688162	0002900154	S	3280	ACAGATGCAGAACTGGAAGCAGTCAAGGAAAAGAGTTACCGCCAAGTTCG	15	+	46378732-46378764:46380804-46380820	15q21.1c-q21.1d	Homo sapiens solute carrier family 12 (sodium/potassium/chloride transporters), member 1 (SLC12A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7929272] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7929272] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + K+(out) + Cl-(out) = Na+(in) + K+(in) + Cl-(in) [goid 8511] [pmid 8640224] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC48843; BSC1; NKCC2	MGC48843; BSC1; NKCC2
Homo sapiens	RefSeq	XR_001418.1	ILMN_36705	MGC45922	XR_001418.1	XR_001418.1		284365	89057593	XR_001418.1	MGC45922		ILMN_1798964	0000990259	A	655	CAGGTGGACACAGCACCGCCCAGCATTTGGTGCAACTCCACCCTTCTGCA				19q13.33c	PREDICTED: Homo sapiens hypothetical gene MGC45922 (MGC45922), misc RNA.					
Homo sapiens	RefSeq	NM_198086.1	ILMN_21630	JUB	NM_198086.1	NM_198086.1		84962	37675279	NM_198086.1	JUB	NP_932352.1	ILMN_1811535	0004280187	I	440	GGGAGCAGTGACCCCAGAAGTCTTGCACCTGGGCTGTGGGATAGGTTCCA	14	-	23445943-23445992	14q11.2f	Homo sapiens jub, ajuba homolog (Xenopus laevis) (JUB), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; The migration of epithelial cells along or through a wound gap to reestablish a continuous epithelium [goid 35313] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; The migration of epithelial cells along or through a wound gap to reestablish a continuous epithelium [goid 35313] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Ajuba; MGC15563	Ajuba; MGC15563
Homo sapiens	Unigene	Hs.540658	ILMN_105277	HS.540658	Hs.540658		Hs.540658		5912015	AL117506			ILMN_1866984	0006520341	S	914	GCGATGGATTTGGGCATGTGGGCCAGTTGGGATCAAGGGAAAGGAAGCAT	16	+	8289408-8289457		Homo sapiens mRNA; cDNA DKFZp434F0535 (from clone DKFZp434F0535)					
Homo sapiens	RefSeq	NM_018053.2	ILMN_11071	XKR8	NM_018053.2	NM_018053.2		55113	24431976	NM_018053.2	XKR8	NP_060523.2	ILMN_2087303	0007560435	S	1831	GCACCAACCAGTCCCGGGTTAGATCCCAAATGCTAGAAGCCAGGGATGCC	1	+	28166864-28166913	1p35.3b	Homo sapiens XK, Kell blood group complex subunit-related family, member 8 (XKR8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			XRG8; FLJ10307; RP11-460I13.3	XRG8; FLJ10307; RP11-460I13.3
Homo sapiens	RefSeq	NM_018053.2	ILMN_11071	XKR8	NM_018053.2	NM_018053.2		55113	24431976	NM_018053.2	XKR8	NP_060523.2	ILMN_1675556	0005090274	S	424	CTGAGTTTGACTTGGCCTACGCCGACTTCCTCGCCCTGGACATCAGCATG	1	+	28162648-28162697	1p35.3b	Homo sapiens XK, Kell blood group complex subunit-related family, member 8 (XKR8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			XRG8; FLJ10307; RP11-460I13.3	XRG8; FLJ10307; RP11-460I13.3
Homo sapiens	RefSeq	NM_017579.1	ILMN_182374	DMBT1	NM_007329.2	NM_007329.2		1755	148539841	NM_007329.2	DMBT1	NP_015568.2	ILMN_1681612	0004880458	A	4941	AGTCCCAGTCAACGCCCAGGCCAGATACTTGGCTGACCACCAACTTACCG	10	+	124347508-124347518:124348280-124348318	10q26.13b	Homo sapiens deleted in malignant brain tumors 1 (DMBT1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14732920] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10485905] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a phagocytic vesicle [goid 30670] [pmid 10485905] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [pmid 14732920] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [pmid 14676191] [evidence NAS]; Any process by which infecting bacteria are clumped together by a host organism [goid 43152] [pmid 14732920] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 10485905] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IEA]; The proliferation of cells in the inner cell mass [goid 1833] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation [goid 30858] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [pmid 9288095] [evidence NAS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [pmid 10485905] [evidence TAS]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [pmid 12681477] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 10485905] [evidence TAS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	MGC164738; muclin; GP340	GP340; muclin
Homo sapiens	RefSeq	XM_942926.1	ILMN_34891	LOC647649	XM_942926.1	XM_942926.1		647649	88970691	XM_942926.1	LOC647649	XP_948019.1	ILMN_1666469	0005910270	I	1211	CCACAAATCACAACAAAGAGCAATCAGAACTGGTTAAAGAAGATGGTCTG					PREDICTED: Homo sapiens similar to Ephrin type-A receptor 6 precursor (Tyrosine-protein kinase receptor EHK-2) (EPH homology kinase 2), transcript variant 2 (LOC647649), mRNA.					
Homo sapiens	RefSeq	XR_017531.2	ILMN_183181	LOC644124	XR_017531.2	XR_017531.2		644124	169211164	XR_017531.2	LOC644124		ILMN_3237291	0000150594	S	729	ATTGTGCACTTTGGGGAGAGGGGGACGTTGGGGCAGCCTTTGAACTGGGA	17	-	169012-169061		PREDICTED: Homo sapiens misc_RNA (LOC644124), miscRNA.					
Homo sapiens	RefSeq	XM_937691.1	ILMN_42936	LOC648622	XM_937691.1	XM_937691.1		648622	88959085	XM_937691.1	LOC648622	XP_942784.1	ILMN_1652955	0004050377	S	168	TGTTGGCTGCTCCACTGTCCTCCACTTGCCTACAGGAGGAAAAGCAAGAT					PREDICTED: Homo sapiens similar to ribosomal protein S27 (LOC648622), mRNA.					
Homo sapiens	RefSeq	NM_001118888.1	ILMN_356603	ANGPT2	NM_001118888.1	NM_001118888.1		285	169646753	NM_001118888.1	ANGPT2	NP_001112360.1	ILMN_3250067	0003180689	A	4616	TTGGACTGCATTCCTCACTACTTTTTGCACAATGGTCTCACGTTCTCACA	8	-	6357620-6357669	8p23.1f	Homo sapiens angiopoietin 2 (ANGPT2), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10766762] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10766762] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9204896] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 10766762] [evidence TAS]		
Homo sapiens	RefSeq	NM_001003809.1	ILMN_1741	DLGAP1	NM_001003809.1	NM_001003809.1		9229	51339030	NM_001003809.1	DLGAP1	NP_001003809.1	ILMN_2380779	0004040044	A	2332	GCCAAACCCACCTGTGTAGAAGTGATGCCTTTAGGTCACCCGCCGTCCTC	18	-	3534565-3534613:3557488-3557488	18p11.31e-p11.31d	Homo sapiens discs, large (Drosophila) homolog-associated protein 1 (DLGAP1), transcript variant beta, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9286858] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9024696] [evidence TAS]	GKAP; DAP-1; DAP-1-BETA; DAP-1-ALPHA; SAPAP1; hGKAP; MGC88156	GKAP; DAP-1; DAP-1-BETA; DAP-1-ALPHA; SAPAP1; hGKAP; MGC88156
Homo sapiens	RefSeq	NM_001928.2	ILMN_29029	CFD	NM_001928.2	NM_001928.2		1675	42544238	NM_001928.2	CFD	NP_001919.2	ILMN_1777190	0001240152	S	820	GCAACAAAGTCCCGAGCAATGAAGTCATCCACTCCTGCATCTGGTTGGTC	19	+	814271-814320	19p13.3i	Homo sapiens complement factor D (adipsin) (CFD), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 6459901] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 6459901] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1374388] [evidence TAS]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [pmid 162484] [evidence EXP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 1374388] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DF; ADN; PFD	ADN; DF; PFD
Homo sapiens	RefSeq	XM_926826.1	ILMN_17797	DIAPH2	NM_006729.3	NM_006729.3		1730	115527115	NM_006729.3	DIAPH2	NP_006720.1	ILMN_1651309	0001850538	A	6966	AGCTACAGGCCCAAAGGGTGGAGCCCTGAGAAAGAGGATTACTGCCAGGC	X	+	96744283-96744332	Xq21.33b-q21.33c	Homo sapiens diaphanous homolog 2 (Drosophila) (DIAPH2), transcript variant 156, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 9497258] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9497258] [evidence TAS]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	FLJ11167; POF; DIA; POF2; DIA2	
Homo sapiens	RefSeq	NM_007309.1	ILMN_17797	DIAPH2	NM_006729.3	NM_006729.3		1730	115527115	NM_006729.3	DIAPH2	NP_006720.1	ILMN_1744046	0005270181	S	3530	GAAGCCCTACAATCAGGTGCAGCATTCAGAGACCGTCGAAAGCGGATTCC	X	+	96571340-96571389	Xq21.33b-q21.33c	Homo sapiens diaphanous homolog 2 (Drosophila) (DIAPH2), transcript variant 156, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 9497258] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9497258] [evidence TAS]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	FLJ11167; POF; DIA; POF2; DIA2	POF2; POF; DIA; DIA2
Homo sapiens	RefSeq	NM_014172.2	ILMN_21637	PHPT1	NM_014172.3	NM_014172.3		29085	142373598	NM_014172.3	PHPT1	NP_054891.2	ILMN_1676611	0005390411	S	560	CGGGCGCATCTCCCACCAGAGTCAGGACAAGAAGATTCACGTGTACGGCT	9	+	138864348-138864397	9q34.3e	Homo sapiens phosphohistidine phosphatase 1 (PHPT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12383260] [evidence NAS]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [pmid 12383260] [evidence NAS]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the reaction: phosphohistidine + H2O = histidine + phosphate [goid 8969] [pmid 12383260] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	bA216L13.10; CGI-202; PHP14; HSPC141; RP11-216L13.10; DKFZp564M173	bA216L13.10; CGI-202; PHP14; HSPC141; RP11-216L13.10; DKFZp564M173
Homo sapiens	RefSeq	NR_001442.1	ILMN_137334	FER1L4	NR_001442.1	NR_001442.1		80307	31044426	NR_001442.1	FER1L4		ILMN_1809199	0005080537	S	9058	GGATCCCACAGAACCGGCCCATCAAGCTCCTGGTCAGAGTGTATGTTGTA				20q11.22b	Homo sapiens fer-1-like 4 (C. elegans) (FER1L4) on chromosome 20.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			dJ309K20.1; FLJ22613; bA563A22B.1; C20orf124; FLJ13459	dJ309K20.1; FLJ22613; bA563A22B.1; C20orf124; FLJ13459
Homo sapiens	RefSeq	XR_042406.1	ILMN_348799	LOC100130556	XR_042406.1	XR_042406.1		100130556	169217900	XR_042406.1	LOC100130556		ILMN_3268993	0000840136	M	143	GCTGTTGCCTCAAGAAAAAGTGCTTTTTCTCCATTGATGAGGCTAGACCC				15q11.2b	PREDICTED: Homo sapiens misc_RNA (LOC100130556), miscRNA.					
Homo sapiens	RefSeq	NM_007326.2	ILMN_163022	CYB5R3	NM_007326.2	NM_007326.2		1727	70908371	NM_007326.2	CYB5R3	NP_015565.1	ILMN_2308582	0004590441	A	1831	TGAGCAGTGCCTCTTGTCTGAGGGACATATCAGTGACCTCGACGTTGCCT	22	-	41344854-41344903	22q13.2b	Homo sapiens cytochrome b5 reductase 3 (CYB5R3), transcript variant S, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9207238] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [pmid 1400360] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9207238] [evidence TAS]	The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 1400360] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [pmid 1400360] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DIA1; B5R	DIA1; B5R
Homo sapiens	RefSeq	NM_001920.3	ILMN_19041	DCN	NM_001920.3	NM_001920.3		1634	47419925	NM_001920.3	DCN	NP_001911.1	ILMN_1683194	0000050368	I	244	TCAACCTAGTCACAGAGCAGCACCTACCCCCTCCTCCTTTCCACACCTGC	12	-	91576513-91576562	12q21.33c	Homo sapiens decorin (DCN), transcript variant A1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 7961765] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PGII; DSPG2; CSCD; PGS2; SLRR1B; PG40	PGII; DSPG2; CSCD; PGS2; SLRR1B; PG40
Homo sapiens	RefSeq	NM_013451.2	ILMN_28913	FER1L3	NM_133337.1	NM_133337.1		26509	19718758	NM_133337.1	FER1L3	NP_579899.1	ILMN_1810289	0003170273	A	6348	GCCATGTCACCGAGCCCCATTGATTCCCAGAGGGTCTTAGTCCTGGAAAG	10	-	95056547-95056596	10q23.33a-q23.33b	Homo sapiens fer-1-like 3, myoferlin (C. elegans) (FER1L3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10607832] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 10607832] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 10607832] [evidence TAS]		FLJ36571; FLJ90777; MYOF	FLJ36571; FLJ90777; MYOF
Homo sapiens	Unigene	Hs.128292	ILMN_76609	HS.128292	Hs.128292		Hs.128292		5109009	AI740721			ILMN_1839956	0005670524	S	321	TCAGGGTGGAGGTGTCCCTAGAGGGTTGGGGGTCAGGGATATTTATGGTC	15	+	63406826-63406875		wg17d08.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:2365359 3, mRNA sequence					
Homo sapiens	RefSeq	NM_172160.1	ILMN_29046	KCNAB1	NM_172160.1	NM_172160.1		7881	27436965	NM_172160.1	KCNAB1	NP_751892.1	ILMN_1696189	0006130739	I	164	AGCCTCAGAAAACGCTAAAGACAGCAGCCTTAGTCCCTCAGGGGAAAGCC	3	+	157321205-157321254	3q25.31b	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, beta member 1 (KCNAB1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 7499366] [evidence TAS]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA];  [goid 15459] [pmid 7499366] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KV-BETA-1; Kvb1.3; hKvBeta3; hKvb3; AKR6A3; KCNA1B	KV-BETA-1; Kvb1.3; hKvBeta3; hKvb3; AKR6A3; KCNA1B
Homo sapiens	RefSeq	XM_944732.1	ILMN_46937	LOC648517	XM_944732.1	XM_944732.1		648517	89061895	XM_944732.1	LOC648517	XP_949825.1	ILMN_1707690	0000290138	I	562	CACAGTTCTGTGTCACATTTATCTTGATCTTCCACACCTCACAATTCCTT					PREDICTED: Homo sapiens similar to Aldo-keto reductase family 1 member C1 (20-alpha-hydroxysteroid dehydrogenase) (20-alpha-HSD) (Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase) (High-affinity hepatic bile acid-binding protein) (HBAB) (Chlordecone reductase homolog HAKRC..., transcript variant 2 (LOC648517), mRNA.					
Homo sapiens	Unigene	Hs.98563	ILMN_74516	HS.98563	Hs.98563		Hs.98563		2112133	AA428865			ILMN_1910185	0000610450	S	477	AGAAGTTGGTGCAGGAAAATGTTTGGGTAGGATGGGACAGGAAGGATGAG	2	-	213727744-213727793		zw57h03.s1 Soares_total_fetus_Nb2HF8_9w Homo sapiens cDNA clone IMAGE:774197 3, mRNA sequence					
Homo sapiens	RefSeq	XR_036943.1	ILMN_343454	LOC100134248	XR_036943.1	XR_036943.1		100134248	169217386	XR_036943.1	LOC100134248		ILMN_3242442	0002480369	S	328	AGGCATTTGAAGGTGGTTTGTTTCAGAATGGCTTTAGGTCCATGCCTTAT					PREDICTED: Homo sapiens misc_RNA (LOC100134248), miscRNA.					
Homo sapiens	RefSeq	NM_199367.1	ILMN_26564	SPG7	NM_199367.1	NM_199367.1		6687	40806172	NM_199367.1	SPG7	NP_955399.1	ILMN_1697096	0005870121	A	986	GCGAGTTTGTGGATTATCTGAAGAGCCCAGAACGCTTCCTCCAGCTTGGC	16	+	88124695-88124717:88125813-88125839	16q24.3b	Homo sapiens spastic paraplegia 7 (pure and complicated autosomal recessive) (SPG7), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9635427] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9635427] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9635427] [evidence TAS]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11549317] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 9635427] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9635427] [evidence TAS]	CAR; FLJ37308; SPG5C; MGC126332; CMAR; MGC126331; PGN	CAR; FLJ37308; SPG5C; MGC126332; CMAR; MGC126331; PGN
Homo sapiens	RefSeq	NM_199367.1	ILMN_26564	SPG7	NM_199367.1	NM_199367.1		6687	40806172	NM_199367.1	SPG7	NP_955399.1	ILMN_1675583	0004810274	I	2016	TCCCTTCAACGTAGTCATCCCCTGGTGGTGGAAGCAAGACGACGGCCCCT	16	+	88131344-88131393	16q24.3b	Homo sapiens spastic paraplegia 7 (pure and complicated autosomal recessive) (SPG7), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9635427] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9635427] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9635427] [evidence TAS]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11549317] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 9635427] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9635427] [evidence TAS]	CAR; FLJ37308; SPG5C; MGC126332; CMAR; MGC126331; PGN	CAR; FLJ37308; SPG5C; MGC126332; CMAR; MGC126331; PGN
Homo sapiens	RefSeq	NR_024116.2	ILMN_372161	RASA4P	NR_024116.2	NR_024116.2		401331	212286157	NR_024116.2	RASA4P		ILMN_3249546	0005270605	S	1158	CCGGTCCTCCTCATTAGGGTGCAGGGCCTAGGTCTCTTCCAAGTGGGGGA	7	-	44068805-44068854		Homo sapiens RAS p21 protein activator 4 pseudogene (RASA4P), non-coding RNA.					
Homo sapiens	RefSeq	XM_929369.1	ILMN_167577	LBH	XM_001132517.1	XM_001132517.1		81606	113413661	XM_001132517.1	LBH	XP_001132517.1	ILMN_1660794	0006940164	S	431	AGCCGCAATTGTTCTGAAAATGTCAAACGAGGCTTCTGTTTTGCACCTGC				2p23.1b	PREDICTED: Homo sapiens hypothetical protein DKFZp566J091 (LBH), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]			
Homo sapiens	RefSeq	NM_030915.1	ILMN_167577	LBH	XM_001132517.1	XM_001132517.1		81606	113413661	XM_001132517.1	LBH	XP_001132517.1	ILMN_1811507	0004230112	A	192	GCAAACTGAAGGACCGTCTGCCCTCCATAGTGGTGGAACCCACAGAAGGG				2p23.1b	PREDICTED: Homo sapiens hypothetical protein DKFZp566J091 (LBH), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]			MGC163287; MGC104312; DKFZP566J091
Homo sapiens	Unigene	Hs.568838	ILMN_121019	HS.568838	Hs.568838		Hs.568838		31565555	BC053535			ILMN_1856998	0004830196	S	770	GACTTCATTAGTGCCCTGGCTCCTGGTGGGATGAGAGTGGAAACCCAGCC	10	+	14169596-14169645		Homo sapiens cDNA clone IMAGE:5170530, partial cds					
Homo sapiens	RefSeq	NM_018989.1	ILMN_339927	RBM27	NM_018989.1	NM_018989.1		54439	168229173	NM_018989.1	RBM27	NP_061862.1	ILMN_3248026	0002060133	S	5826	CCCCTGCCCCCTTTGGGATTTACTTCCACCATCAAATCTTCAACTGTTAG	5	+	145668070-145668119	5q32d	Homo sapiens RNA binding motif protein 27 (RBM27), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Psc1; KIAA1311; ARRS1	Psc1; KIAA1311; ARRS1
Homo sapiens	RefSeq	NM_015353.1	ILMN_13572	KCTD2	NM_015353.1	NM_015353.1		23510	53829364	NM_015353.1	KCTD2	NP_056168.1	ILMN_1718900	0002630521	I	3192	TGGCTGATCACATCAGAGAGGTCTGCGTGGCAGTTTGGGGCTGTCACGTG	17	+	70573070-70573119	17q25.1c	Homo sapiens potassium channel tetramerisation domain containing 2 (KCTD2), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0176	KIAA0176
Homo sapiens	RefSeq	XM_940667.1	ILMN_34689	SDC3	XM_940667.1	XM_940667.1		9672	88947638	XM_940667.1	SDC3	XP_945760.1	ILMN_1680480	0001990551	I	1112	TTTCCCTTTTACCCTCCGCCTCTGCCTCTGGGGGAAGCCCTTAGTGTACC				1p35.2a	PREDICTED: Homo sapiens syndecan 3 (N-syndecan), transcript variant 2 (SDC3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]		
Homo sapiens	RefSeq	NM_001010853.1	ILMN_5772	PM20D2	NM_001010853.1	NM_001010853.1		135293	58082084	NM_001010853.1	PM20D2	NP_001010853.1	ILMN_1766000	0000050470	S	4157	TCTGAGCAACATTGGGACTGAGGGAACATCTGAAAGCTACCATCTTGAAA	6	+	89874733-89874782	6q15c	Homo sapiens peptidase M20 domain containing 2 (PM20D2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	bA63L7.3; ACY1L2	bA63L7.3; ACY1L2
Homo sapiens	Unigene	Hs.443993	ILMN_92632	HS.443993	Hs.443993		Hs.443993		27784970	CB046683			ILMN_1899762	0002850240	S	557	TGCATCGCATGGAAGGGAGCGGGCCTGAGAAGTGAAAGCAGGATGGGCAA	5	+	66511731-66511780		NISC_gf06b05.x1 NCI_CGAP_Kid12 Homo sapiens cDNA clone IMAGE:3252801 3, mRNA sequence					
Homo sapiens	Unigene	Hs.121314	ILMN_75721	HS.121314	Hs.121314		Hs.121314		27823681	BX089093			ILMN_1840252	0004830162	S	28	GAGGGAAAGTAGGAAGTTGTGACACTTTCATTCCAGCAGCATCTTGTACA	3	-	140205919-140205968		BX089093 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998J203332 ; IMAGE:1321843, mRNA sequence					
Homo sapiens	RefSeq	NM_001510.1	ILMN_8975	GRID2	NM_001510.1	NM_001510.1		2895	4557632	NM_001510.1	GRID2	NP_001501.1	ILMN_1797331	0005720543	S	2842	GCTGCTTCTGGTTTCACTTTTGGCAACGTGCCTGAGCACCGAACTGGCCC	4	+	94912490-94912539	4q22.1g-q22.2b	Homo sapiens glutamate receptor, ionotropic, delta 2 (GRID2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9465309] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 9465309] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IEA]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IEA]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC117023; MGC117024; MGC117022	MGC117023; MGC117024; MGC117022
Homo sapiens	RefSeq	NM_005462.3	ILMN_173346	MAGEC1	NM_005462.3	NM_005462.3		9947	58530875	NM_005462.3	MAGEC1	NP_005453.2	ILMN_2241627	0007650731	I	4000	CACACCCAAACACACCACATTGGGAAAACCTTCTGCCTCATTTTGTGATG	X	+	140824570-140824619	Xq27.2a	Homo sapiens melanoma antigen family C, 1 (MAGEC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17137291] [evidence IPI]	MAGE-C1; MGC39366; CT7	MAGE-C1; MGC39366; CT7
Homo sapiens	RefSeq	NM_001010917.1	ILMN_4547	GOLGA7B	NM_001010917.1	NM_001010917.1		401647	58219039	NM_001010917.1	GOLGA7B	NP_001010917.1	ILMN_1717887	0001710333	S	2602	ACTTGCCCAGCGTGAAGCTCTGTGATGCTTTCTCTGCCCCGTGACGATGG	10	+	99617403-99617452	10q24.2a	Homo sapiens golgi autoantigen, golgin subfamily a, 7B (GOLGA7B), mRNA.				C10orf133; bA451M19.3; MGC131701; bA459F3.4	C10orf133; bA451M19.3; MGC131701; bA459F3.4
Homo sapiens	RefSeq	NM_001010917.1	ILMN_4547	GOLGA7B	NM_001010917.1	NM_001010917.1		401647	58219039	NM_001010917.1	GOLGA7B	NP_001010917.1	ILMN_3247945	0000770711	S	2797	CTTTGGGGCACTTGTAGCCTTGGGTGGGGGAACAGGTTGGACTGAAAGCG	10	+	99617598-99617647	10q24.2a	Homo sapiens golgi autoantigen, golgin subfamily a, 7B (GOLGA7B), mRNA.				C10orf133; bA451M19.3; MGC131701; bA459F3.4	C10orf133; bA451M19.3; MGC131701; bA459F3.4
Homo sapiens	RefSeq	NM_006672.2	ILMN_40034	SLC22A7	NM_006672.3	NM_006672.3		10864	90669131	NM_006672.3	SLC22A7	NP_006663.2	ILMN_1797391	0002810709	A	2415	CATGTCATCCCAACCCCCACACTCCCCATCCTCCAACCCACTGGTCTCAT	6	+	43273138-43273187	6p21.1d	Homo sapiens solute carrier family 22 (organic anion transporter), member 7 (SLC22A7), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9650585] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9650585] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [pmid 9650585] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other, in a sodium independent manner [goid 15347] [pmid 9650585] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC45202; MGC24091; NLT; OAT2	MGC45202; MGC24091; NLT; OAT2
Homo sapiens	RefSeq	NM_002454.1	ILMN_13753	MTRR	NM_002454.1	NM_002454.1		4552	4505278	NM_002454.1	MTRR	NP_002445.1	ILMN_2377977	0003120373	A	1583	CAGCCAAACATACATGCATCCCATGAAGACAGCGGGAAAGCCCTGGCTCC	5	+	7945973-7946022	5p15.31a	Homo sapiens 5-methyltetrahydrofolate-homocysteine methyltransferase reductase (MTRR), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9501215] [evidence TAS]	The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 9501215] [evidence TAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [pmid 9501215] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: [methionine synthase]-cob(II)alamin + NADPH + H+ + S-adenosyl methionine = [methionine synthase]-methylcob(I)alamin + S-adenosylhomocysteine + NADP+ [goid 30586] [pmid 9501215] [evidence TAS]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [pmid 9501215] [evidence TAS]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 9501215] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC129643; MSR	MGC129643; MSR
Homo sapiens	RefSeq	NM_001637.1	ILMN_2504	AOAH	NM_001637.1	NM_001637.1		313	4502114	NM_001637.1	AOAH	NP_001628.1	ILMN_1709820	0002940424	S	2023	CCTGGGGAGCACAGGGAGGCAGAGGCTTGGGTAAACTCATTCCACAAACC	7	-	36519310-36519359	7p14.2a	Homo sapiens acyloxyacyl hydrolase (neutrophil) (AOAH), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 1883828] [evidence TAS]; The chemical reactions and pathways involving lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide [goid 8653] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IEA]	Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate [goid 4465] [pmid 1883828] [evidence TAS]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: 3-(acyloxy)acyl group of bacterial toxin = 3-hydroxyacyl group of bacterial toxin + a fatty acid [goid 50528] [evidence IEA]		
Homo sapiens	RefSeq	NM_001002265.1	ILMN_6980	MARCH8	NM_001002265.1	NM_001002265.1		220972	50539411	NM_001002265.1	MARCH8	NP_001002265.1	ILMN_2341626	0002600634	A	1681	GAGCCTGAAGACACTGGAGCAGAAATCATTCACGTCTGATTGTGTGCGGG	10	-	45953675-45953686:45953687-45953724	10q11.21d	Homo sapiens membrane-associated ring finger (C3HC4) 8 (MARCH8), transcript variant 6, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	c-MIR; MIR; RNF178; MARCH-VIII	c-MIR; MIR; RNF178; MARCH-VIII
Homo sapiens	RefSeq	NM_001002265.1	ILMN_6980	MARCH8	NM_001002265.1	NM_001002265.1		220972	50539411	NM_001002265.1	MARCH8	NP_001002265.1	ILMN_2257749	0000620129	I	687	TGTGTTGCCCAGACTGGTCTCAAACTCCTGGCCTCAAGTGATCCTTCTGC	10	-	46048588-46048637	10q11.21d	Homo sapiens membrane-associated ring finger (C3HC4) 8 (MARCH8), transcript variant 6, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	c-MIR; MIR; RNF178; MARCH-VIII	c-MIR; MIR; RNF178; MARCH-VIII
Homo sapiens	RefSeq	XM_001714740.1	ILMN_336319	LOC100133741	XM_001714740.1	XM_001714740.1		100133741	169168036	XM_001714740.1	LOC100133741	XP_001714792.1	ILMN_3236685	0001780722	S	577	GCCACATACCTCTTGACGTTTTTGCAGCATAGGGGGAGTATGTGCTTTCC					PREDICTED: Homo sapiens hypothetical LOC100133741 (LOC100133741), mRNA.					
Homo sapiens	RefSeq	XM_942620.1	ILMN_34745	LOC652894	XM_942620.1	XM_942620.1		652894	89065318	XM_942620.1	LOC652894	XP_947713.1	ILMN_1784728	0003890731	S	141	CATCTTGTTCTGTCTTTGCTCCTGTGGTCGTCTTTCATTTCTGGGCAGGA					PREDICTED: Homo sapiens similar to RIKEN cDNA 1810036I24 isoform 1 (LOC652894), mRNA.					
Homo sapiens	RefSeq	NM_017548.3	ILMN_169720	LOC729692	XM_001131055.1	XM_001131055.1		729692	113414677	XM_001131055.1	LOC729692	XP_001131055.1	ILMN_1691106	0006660575	I	279	CCTTTTCCCCTCAGGTTGTGGGGAGAGCGGAATCCTGCTCCGCCGTCGCA	3	-	134775228-134775277	3q22.1d	PREDICTED: Homo sapiens hypothetical protein LOC729692 (LOC729692), mRNA.					H41
Homo sapiens	RefSeq	NM_198943.1	ILMN_16422	MGC52000	NM_198943.1	NM_198943.1		375260	39573729	NM_198943.1	MGC52000	NP_945181.1	ILMN_1761068	0002320463	S	1529	ATGGAACCAGCACTGTGCGGAGACCAGCTTCAAGGAGCGGAAGGCTGGCC	2	+	114072901-114072950	2q14.1a	Homo sapiens CXYorf1-related protein (MGC52000), mRNA.				CXYorf1; MGC90409	CXYorf1; MGC90409
Homo sapiens	RefSeq	XM_001718420.1	ILMN_339078	LOC648822	XM_001718420.1	XM_001718420.1		648822	169162670	XM_001718420.1	LOC648822	XP_001718472.1	ILMN_3280651	0003780369	M	1	ATGAGGTTGGAAAAGCTGGCCAGGCGCCTACATCCCGTCGCTGTTGCCAC	1	+	153386926-153386949:153387614-153387639	1q22a	PREDICTED: Homo sapiens similar to hCG2040565 (LOC648822), mRNA.					
Homo sapiens	RefSeq	XM_001722678.1	ILMN_341391	LOC100130083	XM_001722678.1	XM_001722678.1		100130083	169204757	XM_001722678.1	LOC100130083	XP_001722730.1	ILMN_3260465	0002640333	M	330	AAGGGATGTCATTCCGGGAGCAGCCCTTGGGACAGCCAGCAGCAGGTGCT				12q13.3a	PREDICTED: Homo sapiens similar to HBcAg-binding protein (LOC100130083), mRNA.					
Homo sapiens	RefSeq	NM_000846.3	ILMN_15139	GSTA2	NM_000846.3	NM_000846.3		2939	22202620	NM_000846.3	GSTA2	NP_000837.2	ILMN_2168747	0002120743	S	612	GTGGAAGAGCTTGACTCTAGCCTTATTTCCAGCTTCCCTCTGCTGAAGGC	6	-	52723454-52723456:52724334-52724380	6p12.1d	Homo sapiens glutathione S-transferase A2 (GSTA2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 3138230] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GST2; GSTA2-2; GTA2; MGC10525; GTH2	GTA2; MGC10525; GTH2; GST2; GSTA2-2
Homo sapiens	RefSeq	NM_000846.3	ILMN_15139	GSTA2	NM_000846.3	NM_000846.3		2939	22202620	NM_000846.3	GSTA2	NP_000837.2	ILMN_1655613	0002490520	S	161	GGAGTCCATCCGGTGGCTCCTGGCTGCAGCTGGAGTAGAGTTTGAAGAGA	6	-	52729056-52729066:52730618-52730656	6p12.1d	Homo sapiens glutathione S-transferase A2 (GSTA2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 3138230] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GST2; GSTA2-2; GTA2; MGC10525; GTH2	GTA2; MGC10525; GTH2; GST2; GSTA2-2
Homo sapiens	RefSeq	NM_003884.4	ILMN_167652	KAT2B	NM_003884.4	NM_003884.4		8850	156071487	NM_003884.4	KAT2B	NP_003875.3	ILMN_3243142	0007200703	S	4516	ACAGTGCTTTGTACCGGATCTGCTGAAGCATCTGTCCAGCTGGTATCCTG	3	+	20164793-20164802:20164899-20164938	3p24.3c-p24.3b	Homo sapiens K(lysine) acetyltransferase 2B (KAT2B), mRNA.				KAT2B; P; P/CAF; CAF	KAT2B; P; P/CAF; CAF
Homo sapiens	RefSeq	NM_001012277.1	ILMN_172566	PRAMEF7	NM_001012277.1	NM_001012277.1		441871	59676592	NM_001012277.1	PRAMEF7	NP_001012277.1	ILMN_2104821	0002900458	S	1316	CACCGAGGGACTTAAGGCAGCCCAAGATCATTGTGTTCTGCACCGTCCCC	1	+	12902711-12902760	1p36.21d	Homo sapiens PRAME family member 7 (PRAMEF7), mRNA.					
Homo sapiens	RefSeq	NM_001007067.1	ILMN_14535	SDCBP	NM_001007067.1	NM_001007067.1		6386	55749489	NM_001007067.1	SDCBP	NP_001007068.1	ILMN_2363586	0006040324	A	1342	GACTGTTACAGGCTTAGCTTTGTGTGAAAACCAGTCACCTTTCTCCTAGG	8	+	59494597-59494646	8q12.1c	Homo sapiens syndecan binding protein (syntenin) (SDCBP), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11179419] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9391086] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-5 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-3 [goid 5895] [pmid 11498591] [evidence ISS]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [pmid 11179419] [evidence NAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 10230395] [evidence NAS]; The formation of a cell surface protrusion, such as a lamellipodium or filopodium, at the leading edge of a migrating cell [goid 6930] [pmid 12037664] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9391086] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9883737] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 12037664] [evidence NAS]	Interacting selectively with the interleukin-5 receptor [goid 5137] [pmid 11498591] [evidence ISS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 9391086] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with syndecan, an integral membrane proteoglycan (250-300 kDa) associated largely with epithelial cells [goid 45545] [pmid 9391086] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11152476] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 15371445] [evidence IPI]	MDA-9; SYCL; TACIP18; ST1	MDA-9; SYCL; TACIP18; ST1
Homo sapiens	RefSeq	NM_001007067.1	ILMN_14535	SDCBP	NM_001007067.1	NM_001007067.1		6386	55749489	NM_001007067.1	SDCBP	NP_001007068.1	ILMN_2363591	0000630167	A	640	AACTGTGCAGGATGGAGCTCTGATAAAGCGCACAAGGTGCTCAAACAGGC	8	+	59490682-59490731	8q12.1c	Homo sapiens syndecan binding protein (syntenin) (SDCBP), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11179419] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9391086] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that binds interleukin-3; comprises an alpha and a beta subunit. The alpha chain is specific to the interleukin-5 receptor, whereas the beta chain is shared with the receptors for granulocyte-macrophage colony-stimulating factor and interleukin-3 [goid 5895] [pmid 11498591] [evidence ISS]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [pmid 11179419] [evidence NAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 10230395] [evidence NAS]; The formation of a cell surface protrusion, such as a lamellipodium or filopodium, at the leading edge of a migrating cell [goid 6930] [pmid 12037664] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9391086] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9883737] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 12037664] [evidence NAS]	Interacting selectively with the interleukin-5 receptor [goid 5137] [pmid 11498591] [evidence ISS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 9391086] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with syndecan, an integral membrane proteoglycan (250-300 kDa) associated largely with epithelial cells [goid 45545] [pmid 9391086] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11152476] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 15371445] [evidence IPI]	MDA-9; SYCL; TACIP18; ST1	MDA-9; SYCL; TACIP18; ST1
Homo sapiens	Unigene	Hs.449297	ILMN_93597	HS.449297	Hs.449297		Hs.449297		21980425	BQ771949			ILMN_1901272	0001430070	S	265	TGACACATCCTCTGTTGGTGAACAAGTGAGAAACAGGCATGTTCACATGC	5	-	13651983-13652032		UI-H-EZ1-bbk-h-05-0-UI.s1 NCI_CGAP_Ch2 Homo sapiens cDNA clone UI-H-EZ1-bbk-h-05-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_496946.4	ILMN_41136	FAM90A13	XM_496946.4	XM_496946.4		441314	169172773	XM_496946.4	FAM90A13	XP_496946.1	ILMN_3240907	0005900347	S	631	CCTCAGCCTGCAGTCAGGCACCAGGGCCGCGAGCCTCTCCTCGTGGTGAA	8	+	7126948-7126997	8p23.1f	PREDICTED: Homo sapiens family with sequence similarity 90, member A13 (FAM90A13), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_022061.2	ILMN_14122	MRPL17	NM_022061.2	NM_022061.2		63875	27477130	NM_022061.2	MRPL17	NP_071344.1	ILMN_1797933	0006660270	S	675	TGGACAGTCTTGATGGGGTTGAGAACCTTCTGGGGAGCCAGATGACCCTC	11	-	6659775-6659824	11p15.4c	Homo sapiens mitochondrial ribosomal protein L17 (MRPL17), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]	RPML26; MRP-L26; RPL17L	RPML26; RPL17L; MRP-L26
Homo sapiens	RefSeq	NM_000332.2	ILMN_173593	ATXN1	NM_000332.2	NM_000332.2		6310	51479157	NM_000332.2	ATXN1	NP_000323.2	ILMN_2153332	0005080154	S	10285	GACAGGAGAACTTTTTTCCATATGCGTGCATACTCTCTGTAATTCCAGTG	6	-	16407623-16407672	6p22.3f-p22.3e	Homo sapiens ataxin 1 (ATXN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7647801] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12757932] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7647801] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 17557114] [evidence IDA]; A complex of NXF1 and NXF2 required for the export of the majority of mRNAs from the nucleus to the cytoplasm; localized in the nucleoplasm and at both the nucleoplasmic and cytoplasmic faces of the nuclear pore complex; shuttles between the nucleus and the cytoplasm [goid 42272] [pmid 15615787] [evidence IDA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [pmid 15615787] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 15615787] [evidence NAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15016912] [evidence IDA]; The directed movement of substances out of the nucleus [goid 51168] [pmid 15615787] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 15016912] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 12757932] [evidence IPI]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [pmid 11136710] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 15016912] [evidence IDA]; Interacting selectively with a sequence of guanine residues in an RNA molecule [goid 34046] [pmid 11136710] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16713569] [evidence IPI]; Interacting selectively with a domain within the same polypeptide [goid 43621] [pmid 9097953] [evidence IDA]	SCA1; D6S504E; ATX1	SCA1; D6S504E; ATX1
Homo sapiens	RefSeq	NM_001015055.1	ILMN_4330	RTKN	NM_001015055.1	NM_001015055.1		6242	62739178	NM_001015055.1	RTKN	NP_001015055.1	ILMN_1688256	0006960747	I	87	ACTGAGCAGGCAAAGTCGCAGGGCCGCCAGCATGTTCTCCCGAAACCACC	2	-	74668924-74668943:74668944-74668973	2p13.1b	Homo sapiens rhotekin (RTKN), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10940294] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 15480428] [evidence IDA]; Any process that modulates the frequency, rate or extent of anti-apoptosis [goid 45767] [pmid 15480428] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [pmid 10940294] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16007136] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10940294] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with the GTP-bound form of the Rho protein [goid 17049] [pmid 10940294] [evidence IDA]		
Homo sapiens	RefSeq	NR_024441.1	ILMN_369875	LOC731779	NR_024441.1	NR_024441.1		731779	212549533	NR_024441.1	LOC731779		ILMN_3235143	0006960441	S	429	ATATCAGTAACAGCCTCTGCAACTCCGCCTTGGTGCCCCCGCACGTTCCA	8	+	142353225-142353274		Homo sapiens hypothetical protein LOC731779 (LOC731779), non-coding RNA.					
Homo sapiens	RefSeq	NM_198185.1	ILMN_180995	OVCH2	NM_198185.2	NM_198185.2		341277	148231604	NM_198185.2	OVCH2	NP_937828.2	ILMN_1728147	0000540463	S	1493	GGAAGAAGGAAATAGCTCGGCTGTGTGGCTATGATGTCCCCACCCCTGTG	11	-	7712596-7712631:7713133-7713146	11p15.4b	Homo sapiens ovochymase 2 (OVCH2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	OVTN	OVTN
Homo sapiens	RefSeq	XM_001724546.1	ILMN_346950	LOC647013	XM_001724546.1	XM_001724546.1		647013	169179789	XM_001724546.1	LOC647013	XP_001724598.1	ILMN_3212980	0005860719	A	1076	GCCTCAGAGGAGCAACTCTGACAGGAACTGATTTAGAGAACTGTGATCTG				9p13.2a	PREDICTED: Homo sapiens similar to Potassium channel tetramerisation domain containing 9 (LOC647013), mRNA.					
Homo sapiens	RefSeq	NM_019885.2	ILMN_28662	CYP26B1	NM_019885.2	NM_019885.2		56603	33239448	NM_019885.2	CYP26B1	NP_063938.1	ILMN_1812297	0006280224	S	4051	AGCACTTTCGATGTTGGGCGCTGGCGTTTGTGTTCTGGGCACCACCGTGA	2	-	72356794-72356843	2p13.3a	Homo sapiens cytochrome P450, family 26, subfamily B, polypeptide 1 (CYP26B1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of retinoic acid, one of the three components that makes up vitamin A [goid 34653] [pmid 10823918] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity [goid 48387] [pmid 14532297] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid [goid 1972] [pmid 10823918] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA];  [goid 8401] [pmid 10823918] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CYP26A2; MGC129613; P450RAI-2; DKFZp686G0638	DKFZp686G0638; CYP26A2; MGC129613; P450RAI-2
Homo sapiens	RefSeq	NM_002583.2	ILMN_18537	PAWR	NM_002583.2	NM_002583.2		5074	55769532	NM_002583.2	PAWR	NP_002574.2	ILMN_1806907	0006840546	S	1282	GAAAGTTGTGGGTCAGCTGACCAGGTAGAGGATTCAAGACTCAATGTGGA	12	-	79986364-79986386:79986387-79986413	12q21.2c	Homo sapiens PRKC, apoptosis, WT1, regulator (PAWR), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8943350] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8943350] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 11585763] [evidence NAS]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8943350] [evidence TAS]; Interacting selectively with any enzyme [goid 19899] [pmid 15671026] [evidence IDA]	PAR4; Par-4	PAR4; Par-4
Homo sapiens	RefSeq	NR_024343.1	ILMN_369956	SNAR-I	NR_024343.1	NR_024343.1		100170222	211063475	NR_024343.1	SNAR-I		ILMN_3309138	0002370164	S	11	TTTTTCAACCAATGTGGACCAGGTGTTGGCCTCGAACTCGCACTCTCGAA	3	+	190595729-190595778		Homo sapiens small ILF3/NF90-associated RNA I (SNAR-I), small nuclear RNA.					
Homo sapiens	RefSeq	NM_001018158.1	ILMN_13372	LOC401623	NM_001018158.1	NM_001018158.1		401623	66571322	NM_001018158.1	LOC401623	NP_001018168.1	ILMN_1815447	0006590338	S	495	AAGGCGGCTAGAGAGAAAGGCCAGGTCACCTACAAAGGGAAGCCCTTCAG	X	-	154368616-154368665		Homo sapiens similar to LINE-1 reverse transcriptase homolog (LOC401623), mRNA.					
Homo sapiens	RefSeq	NR_003077.1	ILMN_170755	SNORD99	NR_003077.1	NR_003077.1		692212	98162771	NR_003077.1	SNORD99		ILMN_3248703	0001850273	S	27	AGTGGACATCCATGGATGAGAAATGCGGATATGGGACTGAGACCAGCTCC	1	-	28905258-28905307	1p35.3b	Homo sapiens small nucleolar RNA, C/D box 99 (SNORD99), small nucleolar RNA.				HBII-420	HBII-420
Homo sapiens	RefSeq	XR_039130.1	ILMN_350812	LOC100132972	XR_039130.1	XR_039130.1		100132972	169211093	XR_039130.1	LOC100132972		ILMN_3293981	0006250747	M	627	GGAGGGGAAATGCTTGGCGTGTGTACAAGTATGAGGAGACCAACTTACAC	17	-	22703073-22703122	17q11.1b	PREDICTED: Homo sapiens misc_RNA (LOC100132972), miscRNA.					
Homo sapiens	RefSeq	XM_939969.1	ILMN_41888	LOC284422	XM_209196.5	XM_209196.5		284422	113428047	XM_209196.5	LOC284422	XP_209196.1	ILMN_1774375	0007320377	A	650	AACATGGTTTTCATGCACCCCTCTTCCTGAGCTTGGTCCCTGCCTGGTGA	19	-	3425613-3425662	19p13.3f	PREDICTED: Homo sapiens similar to HSPC323 (LOC284422), mRNA.					
Homo sapiens	RefSeq	NM_014399.3	ILMN_17008	TSPAN13	NM_014399.3	NM_014399.3		27075	62422581	NM_014399.3	TSPAN13	NP_055214.1	ILMN_2130525	0003420452	S	1525	TACCTTCAGCCTCCATCAGAATGGAACGAGTTTTGAGTAATCAGGAAGTA	7	+	16790309-16790358	7p21.1b	Homo sapiens tetraspanin 13 (TSPAN13), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10719184] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10719184] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			FLJ22934; NET-6; TM4SF13	FLJ22934; NET-6; TM4SF13
Homo sapiens	RefSeq	NM_014399.3	ILMN_17008	TSPAN13	NM_014399.3	NM_014399.3		27075	62422581	NM_014399.3	TSPAN13	NP_055214.1	ILMN_1669881	0006660131	S	1071	GTGGCACCTGGAATTTACTGTATTCATTGTCGGGCACTGTCCACTGTGGC	7	+	16789855-16789904	7p21.1b	Homo sapiens tetraspanin 13 (TSPAN13), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10719184] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10719184] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			FLJ22934; NET-6; TM4SF13	FLJ22934; NET-6; TM4SF13
Homo sapiens	RefSeq	NM_005445.3	ILMN_19993	SMC3	NM_005445.3	NM_005445.3		9126	63054826	NM_005445.3	SMC3	NP_005436.1	ILMN_1718807	0002970292	S	3491	TGGTAGCCCTTGCTCTGATTTTTGCCATTCAGAAATGTGACCCGGCTCCA	10	+	112344125-112344154:112346146-112346165	10q25.2a	Homo sapiens structural maintenance of chromosomes 3 (SMC3), mRNA.	A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [pmid 11590136] [evidence IDA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [pmid 9015313] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9506951] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11590136] [evidence IDA]; A protein complex required for sister chromatid cohesion in eukaryotes [goid 8278] [pmid 9506951] [evidence NAS]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11590136] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle [goid 7052] [pmid 11590136] [evidence IEP]; The cell cycle process by which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome [goid 7062] [pmid 11590136] [evidence NAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 9506951] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 12498344] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 12651860] [evidence IDA]; The introduction and uptake of foreign genetic material (DNA or RNA) into a cell, and often the expression of that genetic material [goid 9294] [pmid 10801778] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 11590136] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [pmid 11590136] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11590136] [evidence IPI]	CDLS3; SMC3L1; SMC3; CSPG6; BMH; HCAP; BAM	CDLS3; SMC3L1; SMC3; CSPG6; BMH; HCAP; BAM
Homo sapiens	RefSeq	XM_001717426.1	ILMN_350736	LOC100133070	XM_001717426.1	XM_001717426.1		100133070	169214166	XM_001717426.1	LOC100133070	XP_001717478.1	ILMN_3293885	0004810743	M	991	GCAGCTTTCGTAAGATTCCCCGTTCAGTGGTTCCTCTGGGGAGGAGCTGC				19p13.3d	PREDICTED: Homo sapiens hypothetical protein LOC100133070 (LOC100133070), mRNA.					
Homo sapiens	RefSeq	XM_941925.1	ILMN_31513	LOC652471	XM_941925.1	XM_941925.1		652471	89034690	XM_941925.1	LOC652471	XP_947018.1	ILMN_1800997	0006290551	S	217	CTACGAGGAGGAGATTTACGACTTGGCCGGGCGCAGCAAAGGCCAGACTC					PREDICTED: Homo sapiens similar to septin 7 (LOC652471), mRNA.					
Homo sapiens	RefSeq	XM_001720964.1	ILMN_338997	LOC100131261	XM_001720964.1	XM_001720964.1		100131261	169161131	XM_001720964.1	LOC100131261	XP_001721016.1	ILMN_3204040	0006770685	A	120	AAGTAAATTTCTGTCCATTTTGTCGGTAGAGGCAGAAGGAGAAGGTCGGA	1	-	118123017-118123066	1p12c	PREDICTED: Homo sapiens similar to hCG1728885 (LOC100131261), mRNA.					
Homo sapiens	RefSeq	XR_016174.2	ILMN_176725	LOC642513	XR_016174.2	XR_016174.2		642513	169172930	XR_016174.2	LOC642513		ILMN_3292320	0000160274	M	2319	GAAGGGCCTGTACCTCCCTACCAGTGACCTGGTGTCCTTATTTCTACCGC	8	-	31195766-31195815	8p12e	PREDICTED: Homo sapiens misc_RNA (LOC642513), miscRNA.					
Homo sapiens	Unigene	Hs.254006	ILMN_83531	HS.254006	Hs.254006		Hs.254006		21755574	AK096154			ILMN_1913336	0005360315	S	1921	GCAGATTCTCTGGCGGTACCTTAGACCTCCTGAATTAGAAACTCTGGGGG	5	-	114567870-114567919		Homo sapiens cDNA FLJ38835 fis, clone MESAN2002424					
Homo sapiens	Unigene	Hs.281931	ILMN_84546	HS.281931	Hs.281931		Hs.281931		24901291	BC039681			ILMN_1826101	0004230747	S	853	GTCCCTCACTGGATGAACTGTGACAAAGTAGGGTACTGCGTGGTCTCCCC	3	+	52249912-52249961		Homo sapiens, clone IMAGE:5218705, mRNA					
Homo sapiens	RefSeq	NM_017842.2	ILMN_371793	SLC48A1	NM_017842.2	NM_017842.2		55652	209862795	NM_017842.2	SLC48A1	NP_060312.2	ILMN_3247587	0002470021	S	2958	CTTGACGGCGCACTGCTCACTTCTGGGGGGCCCTTTCAGAGGCACTTTTA	12	+	48176460-48176509	12q13.11b	Homo sapiens solute carrier family 48 (heme transporter), member 1 (SLC48A1), mRNA.					
Homo sapiens	RefSeq	NM_003393.2	ILMN_2121	WNT8B	NM_003393.3	NM_003393.3		7479	110735436	NM_003393.3	WNT8B	NP_003384.2	ILMN_1749675	0002510519	S	1877	CCCGAGGGACTCCAGATACATACCCCGAAGGTCTAGGAAATACGTTAAGG	10	+	102233088-102233137	10q24.31a	Homo sapiens wingless-type MMTV integration site family, member 8B (WNT8B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9536085] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8661156] [evidence TAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8661156] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9536085] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8661156] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9536085] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_004850.3	ILMN_23757	ROCK2	NM_004850.3	NM_004850.3		9475	41872582	NM_004850.3	ROCK2	NP_004841.2	ILMN_1659099	0005670333	S	5839	GTACCGGGTTAAGAAAACTGGCAACTGGGAAGAAGTGGCCTCAAAGGCAC	2	-	11323063-11323112	2p25.1b	Homo sapiens Rho-associated, coiled-coil containing protein kinase 2 (ROCK2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 9933571] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9933571] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9933571] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9933571] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0619	KIAA0619
Homo sapiens	RefSeq	NM_004850.3	ILMN_23757	ROCK2	NM_004850.3	NM_004850.3		9475	41872582	NM_004850.3	ROCK2	NP_004841.2	ILMN_2058337	0004860719	S	6347	AGCGAAGATCGAGCCACTGCACTCCAGCCTGGGCAGCTGAACAAGACTCC	2	-	11322555-11322604	2p25.1b	Homo sapiens Rho-associated, coiled-coil containing protein kinase 2 (ROCK2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 9933571] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9933571] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9933571] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9933571] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0619	KIAA0619
Homo sapiens	RefSeq	NM_016282.2	ILMN_6776	AK3	NM_016282.2	NM_016282.2		50808	19923436	NM_016282.2	AK3	NP_057366.2	ILMN_1778173	0000670463	S	2525	GTGGCTATTACTTTGTTCTTGGTCCTTCACAGGGCCTGCTCCATCCCACC	9	-	4711636-4711685	9p24.1c	Homo sapiens adenylate kinase 3 (AK3), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP [goid 46899] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP [goid 46899] [evidence IEA]	AKL3L1; AK6; AKL3L; AK3L1; FIX	AKL3L1; AK6; AKL3L; AK3L1; FIX
Homo sapiens	RefSeq	NM_181844.2	ILMN_23358	BCL6B	NM_181844.2	NM_181844.2		255877	38327514	NM_181844.2	BCL6B	NP_862827.1	ILMN_1651285	0001260093	S	3490	GCAGATTGGATGGGCAGGTGGAGAATGCCTGGGGGTAGAAATGTTAGATC	17	+	6873650-6873685	17p13.1d	Homo sapiens B-cell CLL/lymphoma 6, member B (zinc finger protein) (BCL6B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZBTB28; ZNF62; BAZF	BAZF; ZBTB28; ZNF62
Homo sapiens	RefSeq	NM_145062.1	ILMN_24644	ZUFSP	NM_145062.1	NM_145062.1		221302	21450835	NM_145062.1	ZUFSP	NP_659499.1	ILMN_1796119	0005290717	S	1899	GGCAGTAGAGGGTGCTCTTTCTCTAGAGGAGAAACTTGCCAGGAGACAAG	6	-	117063722-117063735:117073570-117073605	6q22.1d	Homo sapiens zinc finger with UFM1-specific peptidase domain (ZUFSP), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	dJ412I7.3; RP3-412I7.3	dJ412I7.3; RP3-412I7.3
Homo sapiens	RefSeq	NM_001044390.1	ILMN_162845	MUC1	NM_001044390.1	NM_001044390.1		4582	113206023	NM_001044390.1	MUC1	NP_001037855.1	ILMN_2371911	0007200601	A	819	CCCACCAATTTCTCGGACACTTCTCAGTGTGTGGAAGCTCATGTGGGCCC	1	-	155158420-155158469	1q22a	Homo sapiens mucin 1, cell surface associated (MUC1), transcript variant 5, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1697589] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	PEMT; PUM; PEM; EMA; H23AG; MAM6; CD227	PEMT; PUM; PEM; EMA; H23AG; MAM6; CD227
Homo sapiens	RefSeq	NM_031944.1	ILMN_24568	MIXL1	NM_031944.1	NM_031944.1		83881	13994334	NM_031944.1	MIXL1	NP_114150.1	ILMN_1668969	0003800242	S	450	ACCTTTGGCTAGGCCGGAGATTATCCTCAACCACTGTGCTCCTGGAACTG	1	+	224479887-224479936	1q42.12c	Homo sapiens Mix1 homeobox-like 1 (Xenopus laevis) (MIXL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48565] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MIXL; MIX; MGC138179; MILD1	MIXL; MIX; MGC138179; MILD1
Homo sapiens	RefSeq	NM_133279.1	ILMN_6021	FCAR	NM_133279.1	NM_133279.1		2204	19743870	NM_133279.1	FCAR	NP_579813.1	ILMN_2279367	0004250193	I	1455	AGAAAACACAACCTGCCTGGCCGGGCGTGGTGGCGTGAGCCTGTCGTCCC	19	+	60092082-60092131	19q13.42b	Homo sapiens Fc fragment of IgA, receptor for (FCAR), transcript variant 9, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2258698] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2258698] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10835685] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an immunoglobulin of an IgA isotype [goid 19862] [evidence IEA]	CD89	CD89
Homo sapiens	RefSeq	XM_936402.1	ILMN_34317	LOC647336	XM_936402.1	XM_936402.1		647336	89026498	XM_936402.1	LOC647336	XP_941495.1	ILMN_1766558	0002260017	S	523	TAGAGTGTGGGTTTTCTTTAGCGTGTGACTCTGCCCTGTTAACTGATTTG					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region 86T1 precursor (LOC647336), mRNA.					
Homo sapiens	RefSeq	XM_001726493.1	ILMN_342757	LOC100130467	XM_001726493.1	XM_001726493.1		100130467	169206969	XM_001726493.1	LOC100130467	XP_001726545.1	ILMN_3261982	0001770682	M	346	TCAGTGGAAGCAAGGACCTGGAGCAGCCCCCCAAAGGAAACCGAGGGCAA	14	+	100076292-100076341	14q32.2b	PREDICTED: Homo sapiens hypothetical LOC100130467 (LOC100130467), mRNA.					
Homo sapiens	RefSeq	NM_003099.3	ILMN_162688	SNX1	NM_003099.3	NM_003099.3		6642	71772657	NM_003099.3	SNX1	NP_003090.2	ILMN_2365484	0004590743	A	7373	GGGGTCTTACGCCTTTATAACTCCATGGGCCCCAGCAAAGGTTCAGGCTC	15	+	62222638-62222687	15q22.31a	Homo sapiens sorting nexin 1 (SNX1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11279102] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 9819414] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11279102] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SNX1A; Vps5; HsT17379; MGC8664	SNX1A; Vps5; HsT17379; MGC8664
Homo sapiens	RefSeq	NM_003099.3	ILMN_162688	SNX1	NM_003099.3	NM_003099.3		6642	71772657	NM_003099.3	SNX1	NP_003090.2	ILMN_2365479	0000580121	A	7593	TCTCACTTCTGTGTGGCCCGAGGAGGCTGGGTTAATGCTGGGCTTGGTAC	15	+	62222858-62222907	15q22.31a	Homo sapiens sorting nexin 1 (SNX1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11279102] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 9819414] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11279102] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SNX1A; Vps5; HsT17379; MGC8664	SNX1A; Vps5; HsT17379; MGC8664
Homo sapiens	RefSeq	NM_020897.1	ILMN_20127	HCN3	NM_020897.1	NM_020897.1		57657	38327036	NM_020897.1	HCN3	NP_065948.1	ILMN_1787256	0006480674	S	3536	GTAGTCCTTTACCACCCTCACTCTGCCTGTCCCCTCTCCTACTCTACAGC	1	+	153526081-153526130	1q22a	Homo sapiens hyperpolarization activated cyclic nucleotide-gated potassium channel 3 (HCN3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	KIAA1535	KIAA1535
Homo sapiens	RefSeq	NM_005298.2	ILMN_22205	GPR25	NM_005298.2	NM_005298.2		2848	38194223	NM_005298.2	GPR25	NP_005289.2	ILMN_1761766	0000450026	S	732	CATCATCTTCGCCATCGAGAGCACGTTTGTGGGCTCCTGGCTGCCCTTCA	1	+	199109520-199109569	1q32.1b	Homo sapiens G protein-coupled receptor 25 (GPR25), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9020062] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9020062] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [evidence IEA]		
Homo sapiens	RefSeq	NM_001040705.1	ILMN_171654	DEFB107B	NM_001040705.1	NM_001040705.1		503614	103485146	NM_001040705.1	DEFB107B	NP_001035795.1	ILMN_3244220	0000630328	S	61	CTGCACTTCCTTCATCAGCTCTCCACTGATGCCTGGAGCCATGAAAATAT	8	+	7340838-7340865:7340866-7340887	8p23.1e	Homo sapiens defensin, beta 107B (DEFB107B), mRNA.				HsT21816	HsT21816
Homo sapiens	RefSeq	NM_022572.2	ILMN_23079	PNKD	NM_022572.2	NM_022572.2		25953	39725643	NM_022572.2	PNKD	NP_072094.1	ILMN_1774604	0004730349	A	2541	CATGCCTCTGTGCCTTCGCTCATGCTGTTTCTTCCGACTGGAATGCCTTC	2	+	218919403-218919452	2q35e	Homo sapiens paroxysmal nonkinesiogenic dyskinesia (PNKD), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FKSG19; KIPP1184; DKFZp564N1362; MR1; FPD1; TAHCCP2; MGC31943; DYT8; KIAA1184; BRP17; MR-1; PDC	FKSG19; KIPP1184; DKFZp564N1362; MR1; FPD1; TAHCCP2; MGC31943; DYT8; KIAA1184; BRP17; MR-1; PDC
Homo sapiens	Unigene	Hs.554056	ILMN_111787	HS.554056	Hs.554056		Hs.554056		51665791	CR741512			ILMN_1833524	0004640332	S	274	GCACACTGAGCACGAAGGTTCATTGGAAAGGAGACTCTTGTGAGGCCTTG	10	+	9368674-9368723		CR741512 Soares_parathyroid_tumor_NbHPA Homo sapiens cDNA clone IMAGp971I1858 ; IMAGE:1240411 5, mRNA sequence					
Homo sapiens	RefSeq	NM_199191.1	ILMN_15296	BRE	NM_199191.1	NM_199191.1		9577	40353760	NM_199191.1	BRE	NP_954661.1	ILMN_2363489	0001400450	A	1116	CCTGCCTCTGTTTTTCCCTCGAGACCAGCCAACTCTCACATTTCAGTCCG	2	+	28152762-28152775:28205642-28205677	2p23.2b	Homo sapiens brain and reproductive organ-expressed (TNFRSF1A modulator) (BRE), transcript variant 3, mRNA.	A ubiquitin ligase complex found in the nucleus [goid 152] [pmid 14636569] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15465831] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15465831] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 7826398] [evidence IEP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9737713] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [pmid 15465831] [evidence IDA]	Interacting selectively with a peroxisomal targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome [goid 268] [pmid 11676476] [evidence TAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [pmid 15465831] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15465831] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14636569] [evidence IPI]	BRCC45; BRCC4	BRCC45; BRCC4
Homo sapiens	RefSeq	NM_000853.1	ILMN_22828	GSTT1	NM_000853.1	NM_000853.1		2952	4504184	NM_000853.1	GSTT1	NP_000844.1	ILMN_1730054	0007400537	S	720	GTGAGCTGGGAAACCTCACCCTTGCACCGTCCTCAGCAGTCCACAAAGCA	22	-	22706376-22706422:22706423-22706425	22q11.23b	Homo sapiens glutathione S-transferase theta 1 (GSTT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 8198545] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_003064.2	ILMN_28045	SLPI	NM_003064.2	NM_003064.2		6590	15834622	NM_003064.2	SLPI	NP_003055.1	ILMN_2114720	0002140707	S	241	GGATCCTGTTGACACCCCAAACCCAACAAGGAGGAAGCCTGGGAAGTGCC	20	-	43881768-43881792:43882216-43882240	20q13.12b	Homo sapiens secretory leukocyte peptidase inhibitor (SLPI), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	WFDC4; WAP4; MPI; ALK1; ALP; BLPI; HUSI-I; HUSI	WFDC4; BLPI; HUSI; WAP4; MPI; ALK1; ALP; HUSI-I
Homo sapiens	RefSeq	XM_936339.1	ILMN_45718	LOC642183	XM_936339.1	XM_936339.1		642183	89036570	XM_936339.1	LOC642183	XP_941432.1	ILMN_1802115	0007550561	S	922	CTTGGCAGCCCCAGCAAACCTCCTCCAGAAAGCATCCGTAACAGGCTCGA					PREDICTED: Homo sapiens similar to Polypeptide N-acetylgalactosaminyltransferase 9 (Protein-UDP acetylgalactosaminyltransferase 9) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 9) (Polypeptide GalNAc transferase 9) (GalNAc-T9) (pp-GaNTase 9) (LOC642183), mRNA.					
Homo sapiens	RefSeq	NM_001024209.2	ILMN_179649	SPRR2E	NM_001024209.2	NM_001024209.2		6704	83582816	NM_001024209.2	SPRR2E	NP_001019380.2	ILMN_2211018	0005810546	S	504	AGCAGTGTCAGTTCCCAGAGCTTTGGAAGAAGGACCAGCAGCTCTGTCCC	1	-	153065735-153065784	1q21.3c	Homo sapiens small proline-rich protein 2E (SPRR2E), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 3133554] [evidence IDA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 8325635] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence NAS]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 3133554] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9722562] [evidence IPI]		
Homo sapiens	RefSeq	XM_938076.1	ILMN_162244	C4ORF51	NM_001080531.1	NM_001080531.1		646603	122937497	NM_001080531.1	C4orf51	NP_001074000.1	ILMN_1709763	0002900209	S	348	TGATGTCAAGCATGGAGTGGCACATCAAATTTGGGATTTTGGTGATTGTT	4	+	146648103-146648121:146650321-146650351	4q31.22b	Homo sapiens chromosome 4 open reading frame 51 (C4orf51), mRNA.					
Homo sapiens	RefSeq	NM_004121.1	ILMN_2383	GGT5	NM_004121.2	NM_004121.2		2687	153266884	NM_004121.2	GGT5	NP_004112.2	ILMN_1749372	0000670538	S	2140	TCGGACCTGAGGAAGAGTGGGGAGGCCGCAGGCTACTAAGACACTGCTCT	22	-	24615926-24615937:24615938-24615975	22q11.23b	Homo sapiens gamma-glutamyltransferase 5 (GGT5), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1676842] [evidence TAS]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 1676842] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]	Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [pmid 1676842] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GGT-REL; GGT5; DKFZP566O011	GGT-REL; GGT5; DKFZP566O011
Homo sapiens	RefSeq	NM_002166.4	ILMN_28481	ID2	NM_002166.4	NM_002166.4		3398	33946335	NM_002166.4	ID2	NP_002157.2	ILMN_1793990	0001260086	S	254	GGAGCAAAACCCCTGTGGACGACCCGATGAGCCTGCTATACAACATGAAC	2	+	8739817-8739866	2p25.1e	Homo sapiens inhibitor of DNA binding 2, dominant negative helix-loop-helix protein (ID2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1741406] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	GIG8; MGC26389; ID2A; ID2H	GIG8; MGC26389; ID2A; ID2H
Homo sapiens	RefSeq	NM_002166.4	ILMN_28481	ID2	NM_002166.4	NM_002166.4		3398	33946335	NM_002166.4	ID2	NP_002157.2	ILMN_2086095	0001660296	S	911	GCAGACTTTGCCTTTTTTCAAAGGTGGAGCGTGAATACCAGAAGGATCCA	2	+	8741581-8741630	2p25.1e	Homo sapiens inhibitor of DNA binding 2, dominant negative helix-loop-helix protein (ID2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1741406] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	GIG8; MGC26389; ID2A; ID2H	GIG8; MGC26389; ID2A; ID2H
Homo sapiens	RefSeq	XM_944426.1	ILMN_173654	LOC126520	XR_015464.1	XR_015464.1		126520	113428035	XR_015464.1	LOC126520		ILMN_1762151	0005910494	A	1344	TATTCCAGCAAATACGGCTTTGGCTACCAGCTCTTGGACGGGGGGCGCAC	19	+	1482796-1482845	19p13.3h	PREDICTED: Homo sapiens hypothetical protein LOC126520 (LOC126520), misc RNA.					
Homo sapiens	RefSeq	NR_024490.1	ILMN_370167	LOC100129387	NR_024490.1	NR_024490.1		100129387	213513047	NR_024490.1	LOC100129387		ILMN_3236965	0002340286	S	3642	CAAGAACAGTGTGAGACCAAAGGGAATAGCTGGGCAAAGGCCCTAAGGTG	15	+	50650012-50650061	15q21.2a	Homo sapiens hypothetical LOC100129387 (LOC100129387), non-coding RNA.					
Homo sapiens	RefSeq	NM_152232.1	ILMN_170298	TAS1R2	NM_152232.2	NM_152232.2		80834	112789565	NM_152232.2	TAS1R2	NP_689418.2	ILMN_1697141	0007570291	I	318	ACAATGTCCAGCCGGTGCTCTACTTCCTGGCACACGAGGACAACCTCCTT	1	-	19183941-19183990	1p36.13b	Homo sapiens taste receptor, type 1, member 2 (TAS1R2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11917125] [evidence IC ]	The series of events required for a sweet taste stimulus to be received and converted to a molecular signal [goid 1582] [pmid 16720576] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 16720576] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble sweet compounds to initiate a change in cell activity. These receptors are responsible for the sense of sweet taste [goid 33041] [pmid 16720576] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11917125] [evidence NAS]	T1R2; GPR71; TR2	T1R2; GPR71; TR2
Homo sapiens	RefSeq	XM_931904.1	ILMN_32806	LOC653210	XM_931904.1	XM_931904.1		653210	89059672	XM_931904.1	LOC653210	XP_936997.1	ILMN_1670201	0006650025	I	69	ACAGCGAGGGCTGCCTGGTGACTGCTGGATGAAAGGAATGATAGCCTGGG	X	+	51948713-51948762		PREDICTED: Homo sapiens similar to melanoma antigen family D, 4 isoform 1, transcript variant 6 (LOC653210), mRNA.					
Homo sapiens	RefSeq	XR_015383.1	ILMN_183408	LOC729191	XR_015383.1	XR_015383.1		729191	113414199	XR_015383.1	LOC729191		ILMN_3297099	0001980195	M	2893	TGTACCTCCTCAAGTTTCTCCAGCTACGGGCAGTTCAGTAATGGGAACAC				2q33.1f	PREDICTED: Homo sapiens misc_RNA (LOC729191), miscRNA.					
Homo sapiens	RefSeq	XR_038143.1	ILMN_333785	LOC100131868	XR_038143.1	XR_038143.1		100131868	169165115	XR_038143.1	LOC100131868		ILMN_3230315	0004290523	I	2847	GAAATACCACAACCCTCAACTAGAAACACCAATACCAGCTCCTCCACGAG	3	+	198847773-198847822	3q29h	PREDICTED: Homo sapiens misc_RNA (LOC100131868), miscRNA.					
Homo sapiens	RefSeq	NM_153356.1	ILMN_4562	TBC1D21	NM_153356.1	NM_153356.1		161514	23503282	NM_153356.1	TBC1D21	NP_699187.1	ILMN_1778897	0003890494	S	921	CAGATGGTGCGGGAGCAGGTGCTGCAGGAAAGCATGGGCGGGGATGACAT	15	+	71967074-71967123	15q24.1b	Homo sapiens TBC1 domain family, member 21 (TBC1D21), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	MGC34741	MGC34741
Homo sapiens	RefSeq	NM_001980.2	ILMN_17438	STX2	NM_194356.1	NM_194356.1		2054	37577161	NM_194356.1	STX2	NP_919337.1	ILMN_1747775	0005910619	A	3038	GGGACCTGCCTCCCGTGATGTCCCACCTTTCCTTCAAGGTCTGTCATATG	12	-	131274514-131274563	12q24.33b	Homo sapiens syntaxin 2 (STX2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8466509] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 8466509] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 16339081] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1581962] [evidence TAS]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence ISS]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [pmid 8466509] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 1581962] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence ISS]	MGC51014; STX2C; STX2A; EPM; STX2B; EPIM	MGC51014; STX2C; STX2A; EPM; STX2B; EPIM
Homo sapiens	RefSeq	NM_194356.1	ILMN_17438	STX2	NM_194356.1	NM_194356.1		2054	37577161	NM_194356.1	STX2	NP_919337.1	ILMN_1726805	0003850398	I	1026	GGCAAATGATGGTGTGGATAACGTCAGTGTGCATGCCTCTCTGCCAGGGT	12	-	131280543-131280584:131280585-131280592	12q24.33b	Homo sapiens syntaxin 2 (STX2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8466509] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 8466509] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 16339081] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1581962] [evidence TAS]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence ISS]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [pmid 8466509] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 1581962] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence ISS]	MGC51014; STX2C; STX2A; EPM; STX2B; EPIM	MGC51014; STX2C; STX2A; EPM; STX2B; EPIM
Homo sapiens	RefSeq	XM_208990.4	ILMN_41619	LOC284067	XM_208990.4	XM_208990.4		284067	89041566	XM_208990.4	LOC284067	XP_208990.1	ILMN_1725456	0005700114	A	3644	GCACTATGCTACCACTGGGGGAATCTGGTAAGGAGTTTACAGGATCTCTC	17	+	39220403-39220452	17q21.31b	PREDICTED: Homo sapiens hypothetical LOC284067 (LOC284067), mRNA.					
Homo sapiens	RefSeq	XM_001725380.1	ILMN_347270	LOC100128386	XM_001725380.1	XM_001725380.1		100128386	169203657	XM_001725380.1	LOC100128386	XP_001725432.1	ILMN_3267162	0000540324	M	1679	AGACCACCCAGACTCAGCTGATCTGAGGTTAAGTTCAAGCCTGGTAAGAG				11q22.1c	PREDICTED: Homo sapiens hypothetical protein LOC100128386 (LOC100128386), mRNA.					
Homo sapiens	RefSeq	XR_037207.1	ILMN_346797	LOC644451	XR_037207.1	XR_037207.1		644451	169194842	XR_037207.1	LOC644451		ILMN_3289307	0007210025	M	2004	GCTTGGGGGAACAACTGAAGACCACCGTTCAGGTTTTTGAACCCGAGGGC				10q11.23b	PREDICTED: Homo sapiens misc_RNA (LOC644451), miscRNA.					
Homo sapiens	RefSeq	XR_037021.1	ILMN_338342	LOC642590	XR_037021.1	XR_037021.1		642590	169169108	XR_037021.1	LOC642590		ILMN_3279712	0005690397	M	1041	TCAGTCTGACCAAAGCACTGTCGCTCTGTGAAGAACAGCTGGGGCGCCTG				6q13a	PREDICTED: Homo sapiens misc_RNA (LOC642590), miscRNA.					
Homo sapiens	RefSeq	NM_134428.1	ILMN_21620	RFX3	NM_134428.1	NM_134428.1		5991	19743883	NM_134428.1	RFX3	NP_602304.1	ILMN_2238640	0002850338	I	2635	GCCTGAAGGTCGACTGTTGTCAAATTCTATCTGTGCTGAACATTAACTTT	9	-	3270518-3270525:3271003-3271044	9p24.2b-p24.2a	Homo sapiens regulatory factor X, 3 (influences HLA class II expression) (RFX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12411430] [evidence IC ]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12411430] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 8289803] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 12411430] [evidence IDA]	bA32F11.1; MGC87155	bA32F11.1; MGC87155
Homo sapiens	RefSeq	NM_134428.1	ILMN_21620	RFX3	NM_134428.1	NM_134428.1		5991	19743883	NM_134428.1	RFX3	NP_602304.1	ILMN_1756102	0005670528	I	2455	GGCGTGCAACCAAGCCTCCTGAATCCAATTCACAGCGAGCACATTGTCAC	9	-	3275556-3275605	9p24.2b-p24.2a	Homo sapiens regulatory factor X, 3 (influences HLA class II expression) (RFX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12411430] [evidence IC ]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12411430] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 8289803] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 12411430] [evidence IDA]	bA32F11.1; MGC87155	bA32F11.1; MGC87155
Homo sapiens	RefSeq	NM_134428.1	ILMN_21620	RFX3	NM_134428.1	NM_134428.1		5991	19743883	NM_134428.1	RFX3	NP_602304.1	ILMN_1779488	0005260468	A	2231	ATCGTGTTGCTCAGGCAACAGGAGAGACTCCTATAGCAGTCATGGGCGAG	9	-	3278176-3278225	9p24.2b-p24.2a	Homo sapiens regulatory factor X, 3 (influences HLA class II expression) (RFX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12411430] [evidence IC ]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12411430] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 8289803] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 12411430] [evidence IDA]	bA32F11.1; MGC87155	bA32F11.1; MGC87155
Homo sapiens	RefSeq	NM_032124.3	ILMN_14263	HDHD2	NM_032124.4	NM_032124.4		84064	116014329	NM_032124.4	HDHD2	NP_115500.1	ILMN_1702265	0006370477	S	2106	GCTTCGGGTTTTGATGCTTGTTTAGAGATCAGCAGTCTTGGATGGGAGGG	18	-	44633810-44633859	18q21.1b	Homo sapiens haloacid dehalogenase-like hydrolase domain containing 2 (HDHD2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	3110052N05Rik; DKFZP564D1378	3110052N05Rik; DKFZP564D1378
Homo sapiens	RefSeq	XM_001726532.1	ILMN_335021	LOC730259	XM_001726532.1	XM_001726532.1		730259	169163206	XM_001726532.1	LOC730259	XP_001726584.1	ILMN_3235737	0004570332	S	171	ACATTGGACACCACTGCATCCATGTCCATCACACACCACAGCTGCCTTTT	2	-	87460599-87460648	2p11.2d	PREDICTED: Homo sapiens hypothetical LOC730259 (LOC730259), mRNA.					
Homo sapiens	RefSeq	NM_015508.2	ILMN_4419	TIPARP	NM_015508.3	NM_015508.3		25976	142368883	NM_015508.3	TIPARP	NP_056323.2	ILMN_1765578	0006760546	S	3621	CCTGTTGTTTGCTGCCATTGGCATGAAATGGCCAACTGTGGCTGTTACAG	3	+	156424319-156424368	3q25.31b	Homo sapiens TCDD-inducible poly(ADP-ribose) polymerase (TIPARP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PARP-7; PARP-1; FLJ40466; DDF1; DKFZp686P1838; DKFZp686N0351; PARP7; DKFZP434J214	PARP-7; PARP-1; PARP7; DKFZP434J214; FLJ40466; DDF1; DKFZp686P1838; DKFZp686N0351
Homo sapiens	RefSeq	NM_001012755.1	ILMN_171719	MCART6	NM_001012755.1	NM_001012755.1		401612	62988273	NM_001012755.1	MCART6	NP_001012773.1	ILMN_2152422	0006650291	S	5839	GACTTGGAATTGTGACTATCTTGTTTCACTCCACATTGCTTGTGAGACTC	X	-	103230889-103230938	Xq22.2b	Homo sapiens mitochondrial carrier triple repeat 6 (MCART6), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZp686O1267	DKFZp686O1267
Homo sapiens	RefSeq	NM_019044.3	ILMN_1107	CCDC93	NM_019044.3	NM_019044.3		54520	82775370	NM_019044.3	CCDC93	NP_061917.3	ILMN_3248263	0000730343	S	6666	CAGCCCGGCAGCCTGAATTGCCTCTGGGAAGAGGGGTGGGAATGACTTTT	2	-	118673225-118673274	2q14.1d	Homo sapiens coiled-coil domain containing 93 (CCDC93), mRNA.				FLJ10996; FLJ25197; MGC13033	FLJ10996; FLJ25197; MGC13033
Homo sapiens	RefSeq	NM_144703.1	ILMN_24819	LSM14B	NM_144703.2	NM_144703.2		149986	148839361	NM_144703.2	LSM14B	NP_653304.2	ILMN_1777725	0002360754	S	869	GAGGCGATCAGGAAACAGGCGAACAAGGAATCGCTCCAGAGGGCAAAACC	20	+	60138737-60138747:60138981-60139019	20q13.33c	Homo sapiens LSM14B, SCD6 homolog B (S. cerevisiae) (LSM14B), mRNA.				LSM13; bA11M20.3; FAM61B; C20orf40; FT005; FLJ25473; MGC61931	LSM13; bA11M20.3; FAM61B; C20orf40; FT005; FLJ25473
Homo sapiens	RefSeq	NM_020236.2	ILMN_22997	MRPL1	NM_020236.2	NM_020236.2		65008	21265083	NM_020236.2	MRPL1	NP_064621.2	ILMN_2076658	0002680435	S	873	AGCAACATTGGATATGTCAAGTGACCAGATAGCTGCCAATCTGCAAGCAG	4	+	79049544-79049550:79089975-79090017	4q21.1c	Homo sapiens mitochondrial ribosomal protein L1 (MRPL1), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	BM022; L1mt	BM022; L1mt
Homo sapiens	RefSeq	NM_001004358.1	ILMN_7301	FGFRL1	NM_021923.3	NM_021923.3		53834	51988909	NM_021923.3	FGFRL1	NP_068742.2	ILMN_1795865	0004480220	A	2862	AATGATGGAAGGAAGACTGGGTTGCAGGGACTGTGGTCTCTCCTGGGGCC	4	+	1010359-1010408	4p16.3c	Homo sapiens fibroblast growth factor receptor-like 1 (FGFRL1), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11031111] [evidence NAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 21167383] [evidence NAS]	FGFR5; FHFR	FGFR5; FHFR
Homo sapiens	RefSeq	NM_005460.2	ILMN_9515	SNCAIP	NM_005460.2	NM_005460.2		9627	76563939	NM_005460.2	SNCAIP	NP_005451.2	ILMN_1807969	0001660019	S	3400	CATAATGTGGGCAGATTTGGCTCAGCTCCTTCATGAGATCAGGTCAGTGG	5	+	121786565-121786614	5q23.2a	Homo sapiens synuclein, alpha interacting protein (SNCAIP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14506261] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [pmid 11956199] [evidence NAS]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [pmid 11956199] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [pmid 14506261] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [pmid 14506261] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11590439] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11956199] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12364339] [evidence IPI]	MGC39814; SYPH1	MGC39814; SYPH1
Homo sapiens	RefSeq	XM_927484.1	ILMN_44699	LOC644316	XM_927484.1	XM_927484.1		644316	89059076	XM_927484.1	LOC644316	XP_932577.1	ILMN_1811539	0007200309	S	1850	AGAGATGGGGTTTTGCTCAGTCAACCAGCCCAGGCTGGAGTGCAGTGGTG	22	+	92500-92549		PREDICTED: Homo sapiens similar to Asparagine synthetase [glutamine-hydrolyzing] (Glutamine-dependent asparagine synthetase) (TS11 cell cycle control protein) (LOC644316), mRNA.					
Homo sapiens	Unigene	Hs.559770	ILMN_113840	HS.559770	Hs.559770		Hs.559770		15332023	BI492679			ILMN_1880611	0003850113	S	304	CGTGGCAGGTGTACATCTTGCTCCCTTAAATGAATGCTCCTTGACCACTC	1	+	183612456-183612505		df27f11.w1 Morton Fetal Cochlea Homo sapiens cDNA clone IMAGE:2484644 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006618.3	ILMN_14812	KDM5B	NM_006618.3	NM_006618.3		10765	57242795	NM_006618.3	KDM5B	NP_006609.3	ILMN_1755727	0005870482	S	6147	AAGGGGTCTGTTCTGCAGTGGAGAAGACATTCTGGTGACCAGACTTTTGC	1	-	202696718-202696767	1q32.1d	Homo sapiens lysine (K)-specific demethylase 5B (KDM5B), mRNA.				FLJ23670; FLJ12491; RBBP2H1A; KDM5B; PLU-1; FLJ12459; FLJ10538; FLJ16281; PUT1	FLJ23670; FLJ12491; RBBP2H1A; KDM5B; PLU-1; FLJ12459; FLJ10538; FLJ16281; PUT1
Homo sapiens	RefSeq	NM_001099415.1	ILMN_309456	POM121C	NM_001099415.1	NM_001099415.1		100101267	150378544	NM_001099415.1	POM121C	NP_001092885.1	ILMN_3235808	0002120156	S	5715	GTACACACACTGGACGGCAGCGGGAGGCTGGGACTTTCCATTACAAATAG	7	-	75046163-75046212	7q11.23d	Homo sapiens POM121 membrane glycoprotein C (POM121C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		MGC163461; DKFZp586P2220; DKFZp779K1713; MGC163459; FLJ43877; FLJ45082	DKFZp586P2220; FLJ43877; FLJ45082; MGC163461; DKFZp779K1713; MGC163459
Homo sapiens	Unigene	Hs.564673	ILMN_117294	HS.564673	Hs.564673		Hs.564673		6698859	AW292223			ILMN_1862424	0005720187	S	107	GGCTCCTACCTCGAACAATCTCGGTTGTGGGGCAAGTGAGAGCTCCAGAC	14	+	68787411-68787460		UI-H-BI2-agu-e-08-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2725718 3, mRNA sequence					
Homo sapiens	RefSeq	NM_178829.2	ILMN_1574	C7ORF34	NM_178829.3	NM_178829.3		135927	142384271	NM_178829.3	C7orf34	NP_849151.1	ILMN_1700588	0001430386	S	608	CAGTGCTAACTGACTGCCTCTCCAGGTTCGGAGTTTCATCTCCCAGGGCC	7	+	142347915-142347964	7q34f	Homo sapiens chromosome 7 open reading frame 34 (C7orf34), mRNA.				ctm-1	ctm-1
Homo sapiens	RefSeq	NM_001134493.1	ILMN_363652	TOMM6	NM_001134493.1	NM_001134493.1		100188893	197927200	NM_001134493.1	TOMM6	NP_001127965.1	ILMN_3235113	0002070564	S	566	CAGCCTACAATCTGTGACCACCACAAGATGTGCCCTGATGGCAGCTGAAG	6	+	41757346-41757395		Homo sapiens translocase of outer mitochondrial membrane 6 homolog (yeast) (TOMM6), nuclear gene encoding mitochondrial protein, mRNA.					
Homo sapiens	RefSeq	NM_201572.1	ILMN_2192	CACNB2	NM_201572.1	NM_201572.1		783	45359837	NM_201572.1	CACNB2	NP_963866.1	ILMN_2406106	0002850458	A	2016	TGCTACATAAATTGGCCTGGTATGGCTGCAGTCCTCCGGTTGCATACTGG	10	+	18868848-18868897	10p12.33b	Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 8, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9594024] [evidence NAS]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 9254841] [evidence TAS]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence NAS]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [pmid 8494331] [evidence TAS]	Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 9254841] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CACNLB2; FLJ23743; MYSB	CACNLB2; MYSB; FLJ23743
Homo sapiens	RefSeq	XM_001717944.1	ILMN_347113	LOC100128191	XM_001717944.1	XM_001717944.1		100128191	169204914	XM_001717944.1	LOC100128191	XP_001717996.1	ILMN_3266964	0002850709	M	2861	GACCCATGCAACACCAACACTTGGCCTCTTAGACCTCTGACCTCTTCATC				12q23.1c	PREDICTED: Homo sapiens hypothetical protein LOC100128191 (LOC100128191), mRNA.					
Homo sapiens	RefSeq	NM_001032380.1	ILMN_16892	RHOBTB1	NM_001032380.1	NM_001032380.1		9886	75905818	NM_001032380.1	RHOBTB1	NP_001027552.1	ILMN_2293441	0001030670	I	1	CTCTAGCGAGGTGACAGCGTAGAACCAGGGCGGGACCCAGAGCCGCCGCG	10	-	62415701-62415709:62431163-62431203	10q21.2a	Homo sapiens Rho-related BTB domain containing 1 (RHOBTB1), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC33059; KIAA0740; MGC33841	MGC33059; KIAA0740; MGC33841
Homo sapiens	RefSeq	NM_207445.1	ILMN_15468	C15ORF54	NM_207445.1	NM_207445.1		400360	46409513	NM_207445.1	C15orf54	NP_997328.1	ILMN_1812249	0007400603	S	2710	GGTATAAACCCGGAATTGGCTGTGGGGAGTTAGACAGGGAAAATGTCCAC	15	+	37334004-37334053	15q14d	Homo sapiens chromosome 15 open reading frame 54 (C15orf54), mRNA.				FLJ39531	FLJ39531
Homo sapiens	RefSeq	NM_001894.4	ILMN_24481	CSNK1E	NM_001894.4	NM_001894.4		1454	40549399	NM_001894.4	CSNK1E	NP_001885.1	ILMN_1808913	0003440465	I	6	GGATCTGAGGGGTCCTCTCTGTGCCCATCACAGTTTGAGCTTCAGGGAAA	22	-	38714034-38714083	22q13.1b	Homo sapiens casein kinase 1, epsilon (CSNK1E), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 7797465] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7797465] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7797465] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 7797465] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17218255] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC10398; HCKIE	MGC10398; HCKIE
Homo sapiens	RefSeq	XM_939326.1	ILMN_137619	NBPF3	XM_939326.1	XM_939326.1		84224	88946976	XM_939326.1	NBPF3	XP_944419.1	ILMN_1782006	0001690594	I	1725	ACCAAGTGAAAGAAAATCACCTGAGGGCCACAGTGTTCCCTAGCCCTGGC				1p36.12b	PREDICTED: Homo sapiens neuroblastoma breakpoint family, member 3 (NBPF3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	Unigene	Hs.572444	ILMN_124625	HS.572444	Hs.572444		Hs.572444		10437827	AK025332			ILMN_1907834	0000630121	S	1748	GGCTGGTTATCAGGAGTGGCCTGTCCCAAAGCAAATGCTGCATGAGGGTG	1	-	206461398-206461447		Homo sapiens cDNA: FLJ21679 fis, clone COL09221					
Homo sapiens	Unigene	Hs.444348	ILMN_92731	HS.444348	Hs.444348		Hs.444348		6576126	AW242372			ILMN_1901113	0003520520	S	251	TGCGGACGAGTTTCCCCCAAGCTGCAGGCTCCATAAGGACAGTGACAGTG	10	+	124123488-124123537		xm86d10.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2691091 3, mRNA sequence					
Homo sapiens	RefSeq	XM_932488.1	ILMN_31789	LOC644880	XM_932488.1	XM_932488.1		644880	88943199	XM_932488.1	LOC644880	XP_937581.1	ILMN_1717119	0005550739	S	517	AAGGTCCGGGAGAGTGAGCGCGTGGGGAGGAGGGGACGGGAAGAGGAGAC	1	+	145537950-145537999		PREDICTED: Homo sapiens hypothetical protein LOC644880 (LOC644880), mRNA.					
Homo sapiens	RefSeq	NM_001024592.1	ILMN_6944	UNG2	NM_001024592.1	NM_001024592.1		10309	66864910	NM_001024592.1	UNG2	NP_001019763.1	ILMN_1723794	0004810392	I	621	TACAGATGGAGAAAAGTGGGGCGTAGACGGCTTGAGGGACTTGCCCCGTC	5	-	54564512-54564561	5q11.2d	Homo sapiens uracil-DNA glycosylase 2 (UNG2), transcript variant 2, mRNA.				UDG2; FLJ22422	UDG2; FLJ22422
Homo sapiens	RefSeq	XM_938394.1	ILMN_31919	LOC649324	XM_938394.1	XM_938394.1		649324	88945873	XM_938394.1	LOC649324	XP_943487.1	ILMN_1668405	0001430066	S	135	GGAATTGGGAGTTTTTCCTTACAGATTCATCAGGATGAGCATCCAGGCCC				1p36.21d	PREDICTED: Homo sapiens similar to PRAME family member 1 (LOC649324), mRNA.					
Homo sapiens	RefSeq	NM_022875.1	ILMN_29113	SMN2	NM_022875.1	NM_022875.1		6607	13259526	NM_022875.1	SMN2	NP_075013.1	ILMN_2336393	0004040070	A	1208	GAAAAACCATCTGTAAAAGACTGAGGTGGGGGTGGGAGGCCAGCACGGTG	5	+	69408812-69408861	5q13.2a	Homo sapiens survival of motor neuron 2, centromeric (SMN2), transcript variant a, mRNA.				SMNC; BCD541; C-BCD541	SMNC; C-BCD541; BCD541
Homo sapiens	RefSeq	XM_930718.1	ILMN_30660	LOC642267	XM_930718.1	XM_930718.1		642267	89033731	XM_930718.1	LOC642267	XP_935811.1	ILMN_1686514	0000460653	I	2029	CAGGCTGGCCACAAATTCCTGGGCTCAAGTTATCCTCCCACCTCGTCCTT	11	-	125593-125642		PREDICTED: Homo sapiens similar to hypothetical protein LOC284701, transcript variant 3 (LOC642267), mRNA.					
Homo sapiens	RefSeq	XR_037525.1	ILMN_350694	LOC389322	XR_037525.1	XR_037525.1		389322	169168292	XR_037525.1	LOC389322		ILMN_3217285	0002760564	A	1155	GCAGGGATTGGTGGCTCATATGGTGATCTTGGTGGACCTATTACTACTGC				5q23.2f	PREDICTED: Homo sapiens misc_RNA (LOC389322), miscRNA.					
Homo sapiens	Unigene	Hs.561786	ILMN_115087	HS.561786	Hs.561786		Hs.561786		795999	R38543			ILMN_1913095	0002340136	S	105	GCAGTGGAGGGGGCTGTGGGAGGGGTGAATGAAAACAGCCTTAAAGCAAT	8	+	119275217-119275266		yc87e04.s1 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGE:22762 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002432.1	ILMN_4451	MNDA	NM_002432.1	NM_002432.1		4332	4505226	NM_002432.1	MNDA	NP_002423.1	ILMN_1738992	0006290270	S	751	CCAACACTTCGTTTACTCCGAATCAGGAAACCCAGGCCCAACGGCAGGTG	1	+	157080517-157080536:157082001-157082030	1q23.1g	Homo sapiens myeloid cell nuclear differentiation antigen (MNDA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 1644857] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PYHIN3	PYHIN3
Homo sapiens	Unigene	Hs.544325	ILMN_107752	HS.544325	Hs.544325		Hs.544325		3756679	AI204073			ILMN_1881561	0005700544	S	203	AACCTAAGCTGTCTGTCATCTCTGCGGGAGAACAGTGCGGTGGTGGGTGG	6	-	167015400-167015449		qd73a07.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1735092 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006065.1	ILMN_12074	SIRPB1	NM_006065.1	NM_006065.1		10326	5174678	NM_006065.1	SIRPB1	NP_006056.1	ILMN_1733997	0003780017	S	2942	TCATGAGATCTGGTTTTTTGAAAGTGTGTGGCAAGTCCCCCTTCGCTCTC	20	-	1492391-1492440	20p13e	Homo sapiens signal-regulatory protein beta 1 (SIRPB1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9062191] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9062191] [evidence TAS]		SIRP-BETA-1; CD172b; DKFZp686A05192	SIRP-BETA-1; CD172b; DKFZp686A05192
Homo sapiens	RefSeq	XM_001719518.1	ILMN_337348	LOC100128869	XM_001719518.1	XM_001719518.1		100128869	169167094	XM_001719518.1	LOC100128869	XP_001719570.1	ILMN_3255720	0001010112	M	1675	TCCTCCTTCACCGGGAACAGAAGCAGGAGACCGATCAAGGAGGTCCTGAC				4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100128869 (LOC100128869), mRNA.					
Homo sapiens	RefSeq	XM_496037.2	ILMN_33131	LOC440233	XM_496037.3	XM_496037.3		440233	113425068	XM_496037.3	LOC440233	XP_496037.2	ILMN_1792396	0006660301	S	585	GGAAGTTTGCAGGAGAGTTAGAGCAGGCTCTCTCTGCTGTCACTACACAG	15	-	20962086-20962135	15q11.2c	PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC440233), mRNA.					
Homo sapiens	RefSeq	NM_024969.2	ILMN_20070	CSRNP3	NM_024969.2	NM_024969.2		80034	23346411	NM_024969.2	CSRNP3	NP_079245.2	ILMN_2078995	0004610356	S	2866	CCCCCTACATCAAAATGCACTTTAGTGCCCCTTCACGGTACCTCGTGTGG	2	+	166245386-166245435	2q24.3c	Homo sapiens cysteine-serine-rich nuclear protein 3 (CSRNP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17726538] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 17726538] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 17726538] [evidence ISS]	FLJ32093; FLJ11703; TAIP-2; FLJ44141	FLJ32093; FLJ11703; TAIP-2; FLJ44141
Homo sapiens	RefSeq	NM_024969.2	ILMN_20070	CSRNP3	NM_024969.2	NM_024969.2		80034	23346411	NM_024969.2	CSRNP3	NP_079245.2	ILMN_3240470	0000730703	S	2743	TGGGGAGAGTCTAGTTCACTGCCCTCCCTCAGCTGACTCCAGAGATGGAG	2	+	166245263-166245312	2q24.3c	Homo sapiens cysteine-serine-rich nuclear protein 3 (CSRNP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17726538] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 17726538] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 17726538] [evidence ISS]	FLJ32093; FLJ11703; TAIP-2; FLJ44141	FLJ32093; FLJ11703; TAIP-2; FLJ44141
Homo sapiens	RefSeq	NM_001039771.2	ILMN_45604	CBLN3	NM_001039771.2	NM_001039771.2		643866	126722638	NM_001039771.2	CBLN3	NP_001034860.1	ILMN_2053829	0006620291	S	2243	AGGAGAAGATGCCTCTGGAGTTTGGATCGGGTGTTACAGGTACAAGTAGG	14	-	24895791-24895840	14q12a	Homo sapiens cerebellin 3 precursor (CBLN3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]			PRO1486	PRO1486
Homo sapiens	RefSeq	NM_017919.1	ILMN_29240	STX17	NM_017919.1	NM_017919.1		55014	8923603	NM_017919.1	STX17	NP_060389.1	ILMN_1750896	0007160136	S	2401	CGCTTTTTTCTGAGCACAGGGATGGGCACCTGCACCCCAGAAGGTGTGAG	9	+	101772183-101772232	9q31.1a	Homo sapiens syntaxin 17 (STX17), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	FLJ20651; MGC126615; MGC126613; MGC102796	MGC126615; MGC126613; FLJ20651; MGC102796
Homo sapiens	RefSeq	XM_001717144.1	ILMN_338271	LOC100128994	XM_001717144.1	XM_001717144.1		100128994	169171679	XM_001717144.1	LOC100128994	XP_001717196.1	ILMN_3180294	0000650411	A	121	CGGACGGGCGCGCTGCGGGGACCAGGGCTGCTCACTGCGGGGCGTGTGTT				7q21.2b	PREDICTED: Homo sapiens hypothetical protein LOC100128994 (LOC100128994), mRNA.					
Homo sapiens	RefSeq	NM_006101.1	ILMN_14098	NDC80	NM_006101.1	NM_006101.1		10403	5174456	NM_006101.1	NDC80	NP_006092.1	ILMN_1664511	0001050470	S	1661	GGAAGCAGAGGAAGAGGATGAAAAATGTGCCAGTGAGCTTGAGTCCTTGG	18	+	2598715-2598764	18p11.32a	Homo sapiens NDC80 homolog, kinetochore complex component (S. cerevisiae) (NDC80), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [pmid 9315664] [evidence TAS]; A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9315664] [evidence TAS]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [pmid 9315664] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 15504738] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [pmid 15504738] [evidence NAS]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16732327] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15961401] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713649] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14699129] [evidence IPI]	HEC; hsNDC80; TID3; KNTC2; HEC1	HEC; hsNDC80; TID3; KNTC2; HEC1
Homo sapiens	Unigene	Hs.550888	ILMN_110407	HS.550888	Hs.550888		Hs.550888		13712291	BG190604			ILMN_1873766	0002060026	S	30	CAATGAACACAGCCAGACTCAAGAGGAGGAAGCTACTGGGACTCCGGCAG	12	-	66251271-66251320		RST9677 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XR_037483.1	ILMN_352098	LOC389386	XR_037483.1	XR_037483.1		389386	169168994	XR_037483.1	LOC389386		ILMN_3295494	0004780044	M	956	GGCCCCTCTGTGAAAACATGCCCAGCGGCAAGGCCAACAAGCTGGGGGAT				6p21.31a	PREDICTED: Homo sapiens misc_RNA (LOC389386), partial miscRNA.					
Homo sapiens	RefSeq	NM_007039.2	ILMN_175747	PTPN21	NM_007039.3	NM_007039.3		11099	150418004	NM_007039.3	PTPN21	NP_008970.2	ILMN_1719664	0003870095	S	3983	GCAGTCTGAATGGCGGCACGCTGAAGGAAACGTGCGAAGCACAGGCTGAA	14	-	88934304-88934353	14q31.3d	Homo sapiens protein tyrosine phosphatase, non-receptor type 21 (PTPN21), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 7519780] [evidence TAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 7519780] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 7519780] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PTPD1; PTPRL10	PTPD1; PTPRL10
Homo sapiens	RefSeq	NM_016045.1	ILMN_15088	C20ORF45	NM_016045.1	NM_016045.1		51012	7705609	NM_016045.1	C20orf45	NP_057129.1	ILMN_1728168	0007000403	S	1031	GCAGAGCCACCTCCTATAGACGCCCATTGCCCTGCTGCTGTACACTTCAG	20	-	57043045-57043094	20q13.32b	Homo sapiens chromosome 20 open reading frame 45 (C20orf45), mRNA.				dJ543J19.5	dJ543J19.5
Homo sapiens	RefSeq	NM_144701.2	ILMN_174270	IL23R	NM_144701.2	NM_144701.2		149233	24430211	NM_144701.2	IL23R	NP_653302.2	ILMN_2223663	0006650722	S	2327	GCTTCATGGTCACACATACAGGCACAAAAACAGCATTATGTGGACGCCTC	1	+	67497751-67497800	1p31.3a	Homo sapiens interleukin 23 receptor (IL23R), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	NM_014720.2	ILMN_2283	SLK	NM_014720.2	NM_014720.2		9748	41281452	NM_014720.2	SLK	NP_055535.2	ILMN_2159322	0000670470	S	5325	AGCATAATTTACTTGGACAACTTCGTAGGTAGCCTTAACTTCTGGCCAAG	10	+	105765349-105765398	10q25.1a	Homo sapiens STE20-like kinase (yeast) (SLK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA0204; bA16H23.1; STK2; se20-9; MGC133067	KIAA0204; bA16H23.1; STK2; se20-9; MGC133067
Homo sapiens	RefSeq	NM_014720.2	ILMN_2283	SLK	NM_014720.2	NM_014720.2		9748	41281452	NM_014720.2	SLK	NP_055535.2	ILMN_1700834	0004060021	S	5032	CTGAGACAGCACATTTGTGAATGATGCTTGCTGCCTGCCATTTTCAACCT	10	+	105763023-105763072	10q25.1a	Homo sapiens STE20-like kinase (yeast) (SLK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA0204; bA16H23.1; STK2; se20-9; MGC133067	KIAA0204; bA16H23.1; STK2; se20-9; MGC133067
Homo sapiens	RefSeq	NM_152606.2	ILMN_18312	ZNF540	NM_152606.2	NM_152606.2		163255	32306517	NM_152606.2	ZNF540	NP_689819.1	ILMN_1681846	0000580343	S	3034	GTCAGCAGTCTACAGTGCAAAAGAGGGCCTTCACCAGAACCCAAGCATGC	19	+	42734292-42734341	19q13.12c	Homo sapiens zinc finger protein 540 (ZNF540), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ16004; DKFZp547B0714; Nbla10512; DKFZp313K2238	Nbla10512; DKFZp313K2238; FLJ16004; DKFZp547B0714
Homo sapiens	RefSeq	NM_001010890.1	ILMN_19215	PRAMEF9	NM_001010890.1	NM_001010890.1		343070	61102720	NM_001010890.1	PRAMEF9	NP_001010890.1	ILMN_2206592	0007160398	S	1709	TGGATTCGATGGGACTTTGGGGACCTGTGTCCTGTAGATTCGAAAATGGG	1	+	13300613-13300662	1p36.21d	Homo sapiens PRAME family member 9 (PRAMEF9), mRNA.					
Homo sapiens	RefSeq	XM_941876.1	ILMN_139088	BRI3BP	XM_941876.1	XM_941876.1		140707	89036541	XM_941876.1	BRI3BP	XP_946969.1	ILMN_1693410	0006840348	I	3717	GGACCAGCCCTCTCTAGATTGCTGGAATTGTATGGATGTGTTGGGGTTGG				12q24.31f	PREDICTED: Homo sapiens BRI3 binding protein (BRI3BP), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_016002.2	ILMN_30353	SCCPDH	NM_016002.2	NM_016002.2		51097	55770835	NM_016002.2	SCCPDH	NP_057086.2	ILMN_1795839	0004490220	S	1914	TCTAATGGGGGAGGCGGCGTCCCAGTCTGTGTTGCAGCAGCATTCTCATC	1	+	244997502-244997551	1q44d	Homo sapiens saccharopine dehydrogenase (putative) (SCCPDH), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-glutamate + 2-aminoadipate 6-semialdehyde + NADH + H+ [goid 47131] [evidence IEA]	FLJ43187; CGI-49; RP11-439E19.2	CGI-49; RP11-439E19.2; FLJ43187
Homo sapiens	RefSeq	Hs.569778	ILMN_165718	LOC731338	XM_001133466.1	XM_001133466.1		731338	113427277	XM_001133466.1	LOC731338	XP_001133466.1	ILMN_1872037	0007510400	S	249	CCAAACTTGGCCATCTCTTGCTCAAAGGAGATTGGAGGCTGACCACGTAG					PREDICTED: Homo sapiens hypothetical protein LOC731338 (LOC731338), mRNA.					
Homo sapiens	RefSeq	XM_001722582.1	ILMN_339236	LOC100132091	XM_001722582.1	XM_001722582.1		100132091	169162956	XM_001722582.1	LOC100132091	XP_001722634.1	ILMN_3239073	0000510131	S	2	GTTGTGAGCCTGCGAAAGAAGTTTGTGTGGGGACTGTGGGCAGTGAACGC	2	-	114016644-114016693	2q14.1a	PREDICTED: Homo sapiens hypothetical protein LOC100132091 (LOC100132091), mRNA.					
Homo sapiens	RefSeq	NM_005132.1	ILMN_6405	REC8	NM_005132.2	NM_005132.2		9985	115430228	NM_005132.2	REC8	NP_005123.2	ILMN_1751886	0000070541	S	2037	GCCTCCTGATCCAGCCGGGGCCCAGATTCCACTGAGGTTAGAGTCCATTT	14	+	23719110-23719141:23719142-23719159	14q12a	Homo sapiens REC8 homolog (yeast) (REC8), transcript variant 1, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10207075] [evidence TAS]	The cell cycle process by which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome [goid 7062] [pmid 10207075] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 10207075] [evidence TAS]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 10207075] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10207075] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HR21spB; REC8; MGC950; REC8L1; Rec8p	REC8; Rec8p
Homo sapiens	RefSeq	NM_005132.2	ILMN_6405	REC8	NM_005132.2	NM_005132.2		9985	115430228	NM_005132.2	REC8	NP_005123.2	ILMN_2317751	0004830338	A	1894	GCTGCAGGCTAACAGGGAGCCCGACTTCAGCAGCCTGGTGTCACCTCTCA	14	+	23718864-23718913	14q12a	Homo sapiens REC8 homolog (yeast) (REC8), transcript variant 1, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10207075] [evidence TAS]	The cell cycle process by which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome [goid 7062] [pmid 10207075] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 10207075] [evidence TAS]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 10207075] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10207075] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HR21spB; REC8; MGC950; REC8L1; Rec8p	REC8; Rec8p
Homo sapiens	RefSeq	NM_001005204.1	ILMN_7157	OR8U1	NM_001005204.1	NM_001005204.1		219417	52353303	NM_001005204.1	OR8U1	NP_001005204.1	ILMN_2206041	0006560288	S	554	TCAGGCTAACTTGCTCAGACACTCGCTTCAAACAGCTCTGGATCTTTGCC	11	+	55900229-55900278	11q11c	Homo sapiens olfactory receptor, family 8, subfamily U, member 1 (OR8U1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_031426.2	ILMN_18617	AIF1L	NM_031426.2	NM_031426.2		83543	50428929	NM_031426.2	AIF1L	NP_113614.1	ILMN_1770725	0004010647	A	3219	ACCAGTAACGTGAGGACTGCCAAGTATGGCTTTGTCCCTATGACTCAGAG	9	+	132988191-132988240	9q34.13a	Homo sapiens allograft inflammatory factor 1-like (AIF1L), transcript variant 1, mRNA.				MGC29466; FLJ12783; IBA2	MGC29466; FLJ12783; IBA2
Homo sapiens	RefSeq	NM_031426.2	ILMN_18617	AIF1L	NM_031426.2	NM_031426.2		83543	50428929	NM_031426.2	AIF1L	NP_113614.1	ILMN_3246401	0001410021	S	3291	GGTGGATGAAGTATGTGTGTGCGTGTGCATGGGAGTGTGCGTGGACTGGG	9	+	132988263-132988312	9q34.13a	Homo sapiens allograft inflammatory factor 1-like (AIF1L), transcript variant 1, mRNA.				MGC29466; FLJ12783; IBA2	MGC29466; FLJ12783; IBA2
Homo sapiens	RefSeq	NM_005585.2	ILMN_169773	SMAD6	NM_005585.3	NM_005585.3		4091	92859870	NM_005585.3	SMAD6	NP_005576.3	ILMN_1767068	0000580711	S	2529	CCAGAGACACAGCCCCCACGGACAAAACCCCCCAGATATCATCTACCTAG	15	+	64861002-64861051	15q22.31c	Homo sapiens SMAD family member 6 (SMAD6), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9436979] [evidence EXP]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 16886151] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9436979] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16299379] [evidence IPI]; A TGF-beta cytoplasmic mediator that inhibits the signaling function of common-partner and pathway-specific mediators [goid 30617] [pmid 9436979] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MADH6; HsT17432; MADH7	MADH6; HsT17432; MADH7
Homo sapiens	RefSeq	NM_000913.3	ILMN_6491	OPRL1	NM_000913.3	NM_000913.3		4987	33286425	NM_000913.3	OPRL1	NP_000904.1	ILMN_2400926	0004860259	A	2625	TTGAGCCAAACTGCAAAGGCTGTGGTGGCTGTGAGGACACTGCGGGGGTT	20	+	62201857-62201906	20q13.33e	Homo sapiens opiate receptor-like 1 (OPRL1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8137918] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [pmid 10965058] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10571060] [evidence IGI]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [pmid 7566152] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15051] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15051] [evidence IEA]	OOR; MGC34578; NOCIR; KOR-3; ORL1	OOR; MGC34578; NOCIR; KOR-3; ORL1
Homo sapiens	RefSeq	NM_000913.3	ILMN_6491	OPRL1	NM_000913.3	NM_000913.3		4987	33286425	NM_000913.3	OPRL1	NP_000904.1	ILMN_2400922	0001440754	A	3094	TTATGCATGTGGCAAGCGTTACTTCCTGTGCACGTAGCCAGCCCTGGGTC	20	+	62202326-62202375	20q13.33e	Homo sapiens opiate receptor-like 1 (OPRL1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8137918] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [pmid 10965058] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10571060] [evidence IGI]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [pmid 7566152] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15051] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15051] [evidence IEA]	OOR; MGC34578; NOCIR; KOR-3; ORL1	OOR; MGC34578; NOCIR; KOR-3; ORL1
Homo sapiens	RefSeq	XR_016751.2	ILMN_166940	LOC441533	XR_016751.2	XR_016751.2		441533	169217432	XR_016751.2	LOC441533		ILMN_3213930	0000610161	A	168	GGTTGTACGAGGACACTATAAAGGTCAACAAATTGGCAAAGTAGTCAAGG	Y	-	5721561-5721610	Yp11.2j	PREDICTED: Homo sapiens misc_RNA (LOC441533), miscRNA.					
Homo sapiens	RefSeq	NM_133180.1	ILMN_15325	EPS8L1	NM_133180.2	NM_133180.2		54869	148539852	NM_133180.2	EPS8L1	NP_573441.2	ILMN_1662950	0005080301	I	122	CCCAGAAGCTGCCCCAAAGCCAAGCGCCAAGTCTATCTATGAGCAGAGGA	19	+	55589456-55589496:55590367-55590375	19q13.42b	Homo sapiens EPS8-like 1 (EPS8L1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DRC3; MGC23164; PP10566; MGC4642; EPS8R1; FLJ20258	DRC3; PP10566; EPS8R1; FLJ20258; MGC23164; MGC4642
Homo sapiens	Unigene	Hs.583413	ILMN_135594	HS.583413	Hs.583413		Hs.583413		7704561	AW772494			ILMN_1910778	0006590273	S	116	GGCAAAGGAGGACACAAGCAGGTGAGGGGTTTTGTGCTAGCTTGGTGCCT					hn76b07.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:3033781 3, mRNA sequence					
Homo sapiens	RefSeq	NM_013382.3	ILMN_21092	POMT2	NM_013382.3	NM_013382.3		29954	32455270	NM_013382.3	POMT2	NP_037514.2	ILMN_1678805	0006290292	S	4623	GAGTGCTCAGGTTCTGTTTTCTGGAAGTTGCTGGAGAAGGGCTGTCAGGG	14	-	76811245-76811294	14q24.3c	Homo sapiens protein-O-mannosyltransferase 2 (POMT2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein [goid 4169] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	FLJ22309; DKFZp686G10254	FLJ22309; DKFZp686G10254
Homo sapiens	RefSeq	XM_001715921.1	ILMN_340315	LOC641808	XM_001715921.1	XM_001715921.1		641808	169170570	XM_001715921.1	LOC641808	XP_001715973.1	ILMN_3205604	0007150605	A	428	GCGCGCCGAACTCTGAAGGAGTGGACACTGCAGGTGAGCCCGTTCGGTCG	7	-	76084269-76084318	7q11.23f	PREDICTED: Homo sapiens similar to Expressed sequence AI847670 (LOC641808), mRNA.					
Homo sapiens	RefSeq	NM_139240.2	ILMN_17317	C1ORF105	NM_139240.2	NM_139240.2		92346	31543098	NM_139240.2	C1orf105	NP_640333.2	ILMN_1714222	0001660731	S	709	GCCCAGAAAGGAACCAATAGGCAAGACAACGAGGCAGTGAGCGGTAGGAG	1	+	170704318-170704357:170704358-170704367	1q24.3c-q24.3d	Homo sapiens chromosome 1 open reading frame 105 (C1orf105), mRNA.				RP1-106H8.1	RP1-106H8.1
Homo sapiens	RefSeq	NM_058222.1	ILMN_19911	TECTB	NM_058222.1	NM_058222.1		6975	17158034	NM_058222.1	TECTB	NP_478129.1	ILMN_1731213	0002260138	S	805	TGCGACAGTGAGAAACTCTCCTGCCCAGTGACCTGCGATAAACGGAAGCG	10	+	114044350-114044399	10q25.2b	Homo sapiens tectorin beta (TECTB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]		The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]	MGC142059; MGC142057; KIAA1560	MGC142059; MGC142057; KIAA1560
Homo sapiens	RefSeq	XM_001717843.1	ILMN_342161	EBF4	XM_001717843.1	XM_001717843.1		57593	169214739	XM_001717843.1	EBF4	XP_001717895.1	ILMN_3261292	0002450730	M	2090	GGAGGTGCTGGGATTCTGGGCCTCACTGTCTGGGTCTTGGTTCCTCTGAA				20p13c	PREDICTED: Homo sapiens early B-cell factor 4 (EBF4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	Unigene	Hs.534427	ILMN_102288	HS.534427	Hs.534427		Hs.534427		36748	X00437			ILMN_1844464	0005870008	S	1000	GGAGCTTCTAACCCGTCATGGTTCAATACACATTCTTCTTTTGCCAGCGC	7	+	142200996-142200996:142200999-142201047		Human mRNA for T-cell specific protein					
Homo sapiens	RefSeq	NR_024357.1	ILMN_371931	NCRNA00113	NR_024357.1	NR_024357.1		54088	211904180	NR_024357.1	NCRNA00113		ILMN_3248193	0004290719	S	229	ATTCTCCAGTTGGGTGGGTTGTGTGATTTAGTAGTGGCCATTGAGTGGCC					Homo sapiens non-protein coding RNA 113 (NCRNA00113), non-coding RNA.					
Homo sapiens	RefSeq	NM_014298.3	ILMN_21680	QPRT	NM_014298.3	NM_014298.3		23475	45269148	NM_014298.3	QPRT	NP_055113.2	ILMN_1700268	0002940291	S	1113	GCTCCTGTGACCTGTCAGGGCTGACTTCACCTCTGCTCATCTCAGTTTCC	16	+	29616374-29616423	16p11.2d	Homo sapiens quinolinate phosphoribosyltransferase (QPRT), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9473669] [evidence EXP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of quinolinate, the anion of quinolinic acid, also known as 2,3-pyridinedicarboxylic acid [goid 34213] [pmid 9473669] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [pmid 17868694] [evidence IDA]	Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate + CO2 = pyridine-2,3-dicarboxylate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4514] [pmid 17868694] [evidence IDA]; Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate + CO2 = pyridine-2,3-dicarboxylate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4514] [pmid 9473669] [evidence IDA]; Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate + CO2 = pyridine-2,3-dicarboxylate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4514] [pmid 9473669] [evidence EXP]; Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate + CO2 = pyridine-2,3-dicarboxylate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4514] [pmid 3409840] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 17868694] [evidence IDA]	QPRTase	QPRTase
Homo sapiens	RefSeq	NM_001293.1	ILMN_164976	CLNS1A	NM_001293.1	NM_001293.1		1207	4502890	NM_001293.1	CLNS1A	NP_001284.1	ILMN_1736814	0001070639	S	1057	CTGTGTCTGGGTACCCTCTGAGTAGGCCTATAATTCCTACCTTGACTGTG	11	-	77005106-77005155	11q14.1a	Homo sapiens chloride channel, nucleotide-sensitive, 1A (CLNS1A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9359436] [evidence TAS]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8579598] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7887970] [evidence TAS]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 9359436] [evidence TAS]		CLNS1B; CLCI; ICln	CLNS1B; CLCI; ICln
Homo sapiens	RefSeq	XM_944215.1	ILMN_46275	LOC650482	XM_944215.1	XM_944215.1		650482	89040617	XM_944215.1	LOC650482	XP_949308.1	ILMN_1730687	0006220333	S	48	GTTGGCGAACGGACTGTCCCGCGCGCTCGCGGGGTCCTCGGAGCTGCTCT					PREDICTED: Homo sapiens hypothetical protein LOC650482 (LOC650482), mRNA.					
Homo sapiens	RefSeq	NM_170712.1	ILMN_11841	RASSF1	NM_170712.1	NM_170712.1		11186	25777679	NM_170712.1	RASSF1	NP_733830.1	ILMN_1808066	0004780719	I	1	ACTGTTGAGCAGGCCTCTCTGCCTGTGGCCTTCCGGCCGGTTTCCAGACG	3	-	50350616-50350665	3p21.31b	Homo sapiens Ras association (RalGDS/AF-6) domain family 1 (RASSF1), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14743218] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 12024041] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 15109305] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12762840] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11333291] [evidence TAS]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11857081] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	REH3P21; RASSF1A; 123F2; RDA32; NORE2A	REH3P21; RDA32; RASSF1A; 123F2; NORE2A
Homo sapiens	RefSeq	NM_007182.4	ILMN_11841	RASSF1	NM_170712.1	NM_170712.1		11186	25777679	NM_170712.1	RASSF1	NP_733830.1	ILMN_1734205	0002940739	A	1366	CTGAGGTCAGGGAGTGCTGGCTCACAGTACAGCATGTGCCTTAATGCTTC	3	-	50342462-50342511	3p21.31b	Homo sapiens Ras association (RalGDS/AF-6) domain family 1 (RASSF1), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14743218] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 12024041] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 15109305] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12762840] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11333291] [evidence TAS]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11857081] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	REH3P21; RASSF1A; 123F2; RDA32; NORE2A	REH3P21; RDA32; RASSF1A; 123F2; NORE2A
Homo sapiens	RefSeq	NM_015447.1	ILMN_815	CAMSAP1	NM_015447.1	NM_015447.1		157922	40538729	NM_015447.1	CAMSAP1	NP_056262.1	ILMN_1811957	0001340411	S	5855	CGTGTTCGACACAGCCGCTCTCTGTCCTGTAAATAGGGAACTAAAGGCTG	9	-	137841403-137841452	9q34.3c	Homo sapiens calmodulin regulated spectrin-associated protein 1 (CAMSAP1), mRNA.				DKFZP434F195; DKFZp434G2311; RP11-100C15.2; MGC163452; PRO2405; FLJ31228; bA100C15.1	DKFZP434F195; DKFZp434G2311; RP11-100C15.2; MGC163452; PRO2405; FLJ31228; bA100C15.1
Homo sapiens	RefSeq	XM_932849.1	ILMN_180138	LOC728656	XM_001128648.1	XM_001128648.1		728656	113429922	XM_001128648.1	LOC728656	XP_001128648.1	ILMN_1756088	0002120131	I	767	GGGGCACTTGTCGTATTGGGAAGAGGTGTAGTTTCCCAGTGCCTATTCTC	X	+	71983619-71983668	Xq13.1e	PREDICTED: Homo sapiens similar to doublesex and mab-3 related transcription factor 8.1 isoform a (LOC728656), mRNA.					
Homo sapiens	RefSeq	NM_024835.2	ILMN_21528	GGNBP2	NM_024835.2	NM_024835.2		79893	76096367	NM_024835.2	GGNBP2	NP_079111.1	ILMN_1725620	0004900639	S	2500	GTTCTTTCTTCAGGCTTGTGTCTTTAGTTGCGTGGCTGCGCAGGCCTGCC	17	+	32020111-32020160	17q12b	Homo sapiens gametogenetin binding protein 2 (GGNBP2), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		LZK1; FLJ21230; ZNF403; DIF3; LCRG1; FLJ22561; ZFP403; FLJ42090; DIF-3	LZK1; FLJ21230; DIF3; LCRG1; DIF-3; ZNF403; FLJ22561; ZFP403; FLJ42090
Homo sapiens	RefSeq	XM_941861.1	ILMN_38295	LOC650029	XM_941861.1	XM_941861.1		650029	89034890	XM_941861.1	LOC650029	XP_946954.1	ILMN_1778381	0000510132	A	604	CCATCTCCGGGACGTTCTCGGCTCTGCCTCATTGTGTGCAGAAACTGTGG					PREDICTED: Homo sapiens similar to RNA-binding protein 4 (RNA-binding motif protein 4) (Lark homolog) (Hlark) (RNA-binding motif protein 4a), transcript variant 1 (LOC650029), mRNA.					
Homo sapiens	Unigene	Hs.575737	ILMN_127918	HS.575737	Hs.575737		Hs.575737		27836222	BX110166			ILMN_1840705	0002450433	S	271	ACCATATTTCAGAGGCCCACATGGCAAGGAAGGGAGGGCCATCTTTGGCC	X	+	7374540-7374589		BX110166 NCI_CGAP_Kid5 Homo sapiens cDNA clone IMAGp998E014658, mRNA sequence					
Homo sapiens	RefSeq	XM_001713912.1	ILMN_347587	LOC100132274	XM_001713912.1	XM_001713912.1		100132274	169208473	XM_001713912.1	LOC100132274	XP_001713964.1	ILMN_3245654	0005700438	S	348	GTGGAAGATAGAGGCCAACAACCTCAGCTTGGCCTTGAACCCTCACACGG	15	+	80799127-80799176	15q25.2a	PREDICTED: Homo sapiens hypothetical protein LOC100132274 (LOC100132274), mRNA.					
Homo sapiens	RefSeq	XM_498350.2	ILMN_40221	LOC645013	XM_498350.2	XM_498350.2		645013	89059420	XM_498350.2	LOC645013	XP_498350.2	ILMN_1691547	0002480079	S	181	CTCCTCAAGCTTCCACACCGCGCCCGCCAGAGGTACGTCCGACAGGCCTG	X	-	890606-890655		PREDICTED: Homo sapiens similar to 60S ribosomal protein L14 (CAG-ISL 7) (LOC645013), mRNA.					
Homo sapiens	RefSeq	NM_144719.2	ILMN_162486	CCDC13	NM_144719.3	NM_144719.3		152206	154090996	NM_144719.3	CCDC13	NP_653320.3	ILMN_1669621	0005220301	S	2283	AGGATAAGACTCTGTCTGAGGACTCCATCTGCTCCGGGAAGCCAGCCCAG	3	-	42769137-42769186	3p22.1a	Homo sapiens coiled-coil domain containing 13 (CCDC13), mRNA.				FLJ25467	FLJ25467
Homo sapiens	RefSeq	XR_038917.1	ILMN_338226	LOC728533	XR_038917.1	XR_038917.1		728533	169213902	XR_038917.1	LOC728533		ILMN_3299264	0002190017	M	1466	CCCTCCACAGGAGCATAAGAGGATGGGAAAGCACTATGGGGAGACCACCA				19q13.12c	PREDICTED: Homo sapiens misc_RNA (LOC728533), miscRNA.					
Homo sapiens	RefSeq	XR_037322.1	ILMN_340495	LOC729369	XR_037322.1	XR_037322.1		729369	169205742	XR_037322.1	LOC729369		ILMN_3240062	0002450044	S	1225	CTAGACTACACAGAGCTCCACAGTGATCGTCCTCACCTCCAGCTCTTCGC	13	-	1565-1614		PREDICTED: Homo sapiens misc_RNA (LOC729369), miscRNA.					
Homo sapiens	RefSeq	NM_003178.3	ILMN_161968	SYN2	NM_003178.4	NM_003178.4		6854	119672899	NM_003178.4	SYN2	NP_003169.2	ILMN_1757081	0000540014	I	3551	TCAGTCAGGCTACAGGGTGGTGTCAGTCAAGGTCTTTCAGGTGGGGGAGA	3	+	12200956-12201005	3p25.2a	Homo sapiens synapsin II (SYN2), transcript variant IIb, mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8964517] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SYNIIa; SYNII; SYNIIb	SYNIIa; SYNII; SYNIIb
Homo sapiens	RefSeq	NM_024674.3	ILMN_167387	LIN28	NM_024674.4	NM_024674.4		79727	94536796	NM_024674.4	LIN28	NP_078950.1	ILMN_1748903	0001340551	S	3810	CTGAACTGCAGGAGACTGAGCCCCTTTGGGCTTTGGTGACCCCATCACTG	1	+	26628602-26628651	1p36.11b	Homo sapiens lin-28 homolog (C. elegans) (LIN28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12457; LIN-28; CSDD1; LIN28A; ZCCHC1	CSDD1; LIN28A; FLJ12457; LIN-28; ZCCHC1
Homo sapiens	RefSeq	NR_031652.1	ILMN_388575	MIR1250	NR_031652.1	NR_031652.1		100302229	269847276	NR_031652.1	MIR1250		ILMN_3308395	0002360064	S	17	CAGGTGACGGTGCTGGATGTGGCCTTTTTGCCTTTTCTAAAGGCCACATT					Homo sapiens microRNA 1250 (MIR1250), microRNA.					
Homo sapiens	RefSeq	XM_942014.1	ILMN_36577	FLJ43987	XM_942014.2	XM_942014.2		388960	113413759	XM_942014.2	FLJ43987	XP_947107.1	ILMN_1702613	0001430608	A	2708	CCTGAGCCAGTAATGTCAACGCCCATCACAGAAGAGCAGAGGCCAGAGCG				2p13.2a	PREDICTED: Homo sapiens similar to RIKEN cDNA 4930433I11 gene (FLJ43987), mRNA.					
Homo sapiens	RefSeq	NM_020399.2	ILMN_9314	GOPC	NM_020399.2	NM_020399.2		57120	62868211	NM_020399.2	GOPC	NP_065132.1	ILMN_2388585	0001410170	A	3999	AGGAGGGAACTGTTGCAAAGCCATTTCATCGAGAAGGGGACAGAAGGAGA	6	-	117988680-117988729	6q22.2b	Homo sapiens golgi associated PDZ and coiled-coil motif containing (GOPC), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11707463] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11707463] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11384996] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11707463] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [pmid 11384996] [evidence NAS]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [pmid 11707463] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 11707463] [evidence NAS]; The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis [goid 6893] [pmid 11707463] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The selective interaction of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein with specific molecules in the cytoplasm, thereby inhibiting its transport to the cell membrane [goid 43004] [pmid 11707463] [evidence NAS]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [pmid 11707463] [evidence NAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 11707463] [evidence IPI]	Interacting selectively with the Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein [goid 42980] [pmid 11707463] [evidence IPI]; Interacting selectively with the SNAP receptor syntaxin-6 [goid 50430] [pmid 11707463] [evidence IPI]; Interacting selectively with the SNAP receptor syntaxin-6 [goid 50430] [pmid 11384996] [evidence IPI]	GOPC1; FIG; CAL; PIST; dJ94G16.2	GOPC1; FIG; CAL; PIST; dJ94G16.2
Homo sapiens	RefSeq	NM_004331.2	ILMN_13842	BNIP3L	NM_004331.2	NM_004331.2		665	47078259	NM_004331.2	BNIP3L	NP_004322.1	ILMN_1718961	0002640192	S	2795	GTGCATTGTGCTCTTTCCAAGTTCAGCAGCAGTTCTATCAGTGGTGCCAC	8	+	26269939-26269988	8p21.2b	Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3-like (BNIP3L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 10381623] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9973195] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10381623] [evidence IDA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10381623] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9973195] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [pmid 9973195] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 10381623] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 9973195] [evidence IDA]	Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [pmid 10381623] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10381623] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10381623] [evidence IDA]	BNIP3a; NIX	BNIP3a; NIX
Homo sapiens	RefSeq	NM_004331.2	ILMN_13842	BNIP3L	NM_004331.2	NM_004331.2		665	47078259	NM_004331.2	BNIP3L	NP_004322.1	ILMN_2045419	0000620047	S	3220	GAGCAAAACTGCACAAACTTGCACATTGGAAAGTGCAACAAGTTCCCGTG	8	+	26270364-26270413	8p21.2b	Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3-like (BNIP3L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 10381623] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9973195] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10381623] [evidence IDA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10381623] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9973195] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [pmid 9973195] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 10381623] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 9973195] [evidence IDA]	Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [pmid 10381623] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10381623] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10381623] [evidence IDA]	BNIP3a; NIX	BNIP3a; NIX
Homo sapiens	RefSeq	XM_001724539.1	ILMN_347098	LOC100129599	XM_001724539.1	XM_001724539.1		100129599	169172170	XM_001724539.1	LOC100129599	XP_001724591.1	ILMN_3266944	0005290220	M	102	CGGCCTCAATATGTGCCGCCGGTGTTTCCATCAGTATGCAAAGGACATAG				7p14.3c	PREDICTED: Homo sapiens similar to mCG7602 (LOC100129599), mRNA.					
Homo sapiens	RefSeq	XM_927735.1	ILMN_43660	LOC644617	XM_927735.1	XM_927735.1		644617	88953443	XM_927735.1	LOC644617	XP_932828.1	ILMN_1659583	0002510035	S	61	CCGGGGATTCCTTTTGTGTTTCTGTATAACATCGATGACGAGCTGAAGCT	2	-	105248985-105249034		PREDICTED: Homo sapiens hypothetical protein LOC644617 (LOC644617), mRNA.					
Homo sapiens	RefSeq	XR_018361.2	ILMN_178617	LOC642357	XR_018361.2	XR_018361.2		642357	169216379	XR_018361.2	LOC642357		ILMN_3283155	0001170309	M	1312	CATCTGTTGCCATCACCTAGCTGCCTGAACCTGCCCTTCAGGGAGAAGGG				Xq23d	PREDICTED: Homo sapiens misc_RNA (LOC642357), miscRNA.					
Homo sapiens	RefSeq	NM_024009.2	ILMN_8338	GJB3	NM_024009.2	NM_024009.2		2707	54607054	NM_024009.2	GJB3	NP_076872.1	ILMN_1731525	0007200204	I	339	CACCGATGCCCCCATTTCACGCCTGAGGAAGCGGAGGCTCAGACGGGCCA	1	+	35019715-35019764	1p34.3f	Homo sapiens gap junction protein, beta 3, 31kDa (GJB3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence NAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	A wide pore channel activity that enables a direct cytoplasmic connection from one cell to an adjacent cell. The gap junction can pass large solutes as well as electrical signals between cells. Gap junctions consist of two gap junction hemi-channels, or connexons, one contributed by each membrane through which the gap junction passes [goid 5243] [pmid 9704026] [evidence NAS]	EKV; CX31; DFNA2; MGC102938; FLJ22486	EKV; CX31; DFNA2; MGC102938; FLJ22486
Homo sapiens	RefSeq	NM_006534.2	ILMN_10754	NCOA3	NM_181659.1	NM_181659.1		8202	32307125	NM_181659.1	NCOA3	NP_858045.1	ILMN_1708805	0002760390	A	7846	CCACATGAAATGACTTATGGGGGATGGTGAGCTGTGACTGCTTTGCTGAC	20	+	45718934-45718983	20q13.12c	Homo sapiens nuclear receptor coactivator 3 (NCOA3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 97410321] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 15572661] [evidence NAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9267036] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 97410321] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [pmid 97410321] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 9346901] [evidence NAS]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 9267036] [evidence NAS]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 12917342] [evidence IPI]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]	CAGH16; TNRC14; pCIP; ACTR; AIB-1; CTG26; MGC141848; TRAM-1; TNRC16; AIB1; SRC3; SRC-1; RAC3	CAGH16; TNRC14; pCIP; MGC141848; AIB-1; TNRC16; AIB1; SRC3; RAC3; KAT13B; ACTR; CTG26; TRAM-1; SRC-1
Homo sapiens	RefSeq	NM_015702.1	ILMN_8271	C2ORF25	NM_015702.1	NM_015702.1		27249	7661547	NM_015702.1	C2orf25	NP_056517.1	ILMN_2090558	0004560022	S	893	GATGAACGCTACCGACATTTAGGATTCTCTGTTGATGACCTTGGATGCTG	2	-	150134834-150134883	2q23.2a	Homo sapiens chromosome 2 open reading frame 25 (C2orf25), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			CL25022	CL25022
Homo sapiens	RefSeq	NM_015702.1	ILMN_8271	C2ORF25	NM_015702.1	NM_015702.1		27249	7661547	NM_015702.1	C2orf25	NP_056517.1	ILMN_1810759	0004180196	S	803	CGAGCTGAGGGTTATTGGGCTGACTTTATTGACCCATCATCTGGTTTGGC	2	-	150134924-150134928:150135845-150135889	2q23.2a	Homo sapiens chromosome 2 open reading frame 25 (C2orf25), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			CL25022	CL25022
Homo sapiens	RefSeq	NM_198232.1	ILMN_22847	RNASE1	NM_198232.1	NM_198232.1		6035	38201681	NM_198232.1	RNASE1	NP_937875.1	ILMN_1795183	0001090307	A	643	CCTAAGGTCAGAGCAGCGAGATACCCCACCTCCCTCAACCTCATCCTCTC	14	-	21269711-21269756:21269757-21269760	14q11.2b	Homo sapiens ribonuclease, RNase A family, 1 (pancreatic) (RNASE1), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [pmid 8049276] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC12408; RNS1; RIB1	MGC12408; RNS1; RIB1
Homo sapiens	RefSeq	XM_927732.1	ILMN_32296	MGC18216	XM_927732.1	XM_927732.1		145815	89038693	XM_927732.1	MGC18216	XP_932825.1	ILMN_1744023	0006400639	A	3891	GCCATGTCTCCCCAACTCCACAATATCTCTATCATGGGAAACACCTGGGG	15	+	97324631-97324680		PREDICTED: Homo sapiens hypothetical protein MGC18216 (MGC18216), mRNA.					
Homo sapiens	RefSeq	NM_178159.1	ILMN_29275	KRI1	NM_023008.3	NM_023008.3		65095	145580614	NM_023008.3	KRI1	NP_075384.3	ILMN_1751395	0001660168	A	2603	AGCTCTCACCTCGAGACACCTCCCAGACCCCACATCCCCTCAGAACGCTG	19	-	10664113-10664162	19p13.2b	Homo sapiens KRI1 homolog (S. cerevisiae) (KRI1), mRNA.				FLJ12949	
Homo sapiens	RefSeq	NM_017444.3	ILMN_165795	CHRAC1	NM_017444.3	NM_017444.3		54108	24432041	NM_017444.3	CHRAC1	NP_059140.1	ILMN_1722390	0000610300	S	2133	CCCTGTGGTCAGCTCCTTCCCCACCTTTTACCGTGGCAACCGTCAAGCTA	8	+	141596070-141596119	8q24.3c	Homo sapiens chromatin accessibility complex 1 (CHRAC1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A heterotetrameric DNA polymerase complex that catalyzes processive DNA synthesis in the absence of PCNA, but is further stimulated in the presence of PCNA. The complex contains a large catalytic subunit and three small subunits, and is best characterized in Saccharomyces, in which the subunits are named Pol2p, Dpb2p, Dpb3p, and Dpb4p. Some evidence suggests that DNA polymerase epsilon is the leading strand polymerase; it is also involved in nucleotide-excision repair and mismatch repair [goid 8622] [pmid 10880450] [evidence NAS]; A multisubunit complex that uses ATP to increase the general accessibility of DNA in chromatin. Unlike other known chromatin remodeling complexes, CHRAC can also function during chromatin assembly; it uses ATP to convert irregular chromatin into a regular array of nucleosomes with even spacing [goid 8623] [pmid 10880450] [evidence NAS]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 10880450] [evidence NAS]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 10880450] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	YCL1; CHARC1; CHRAC15; CHARC15	YCL1; CHARC1; CHRAC15; CHARC15
Homo sapiens	RefSeq	NM_016589.3	ILMN_7612	C3ORF1	NM_016589.3	NM_016589.3		51300	75750532	NM_016589.3	C3orf1	NP_057673.2	ILMN_2193175	0006220685	S	1463	CAGGTAGGCAAATGGTCTGTGAAACCCTTGGGTCCTGGAAGCAGTGTGAG	3	+	119242995-119243044	3q13.33a	Homo sapiens chromosome 3 open reading frame 1 (C3orf1), mRNA.				FLJ22597	FLJ22597
Homo sapiens	RefSeq	NM_004194.2	ILMN_15977	ADAM22	NM_021723.2	NM_021723.2		53616	21536387	NM_021723.2	ADAM22	NP_068369.1	ILMN_1675210	0001470039	A	2551	CTGTGAAAATGGGCGACCTCGAAGTAACTCTTGGCAAGGTAACCTGGGAG	7	+	87630425-87630431:87633083-87633125	7q21.12b	Homo sapiens ADAM metallopeptidase domain 22 (ADAM22), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9693107] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 9693107] [evidence NAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9693107] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 9693107] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16868027] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MDC2; MGC149832	MGC149832; MDC2
Homo sapiens	RefSeq	NM_024947.2	ILMN_23676	PHC3	NM_024947.2	NM_024947.2		80012	21359977	NM_024947.2	PHC3	NP_079223.2	ILMN_2179873	0000240524	S	2906	CTAGGCCCAGCCCTGAAGATCTGTGCACGCATCAACTCTCTGAAGGAATC	3	-	171297715-171297764	3q26.2b	Homo sapiens polyhomeotic homolog 3 (Drosophila) (PHC3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12729; HPH3; EDR3; DKFZp313K1221; FLJ12967; MGC88144	FLJ12729; HPH3; EDR3; DKFZp313K1221; FLJ12967; MGC88144
Homo sapiens	RefSeq	NM_024947.2	ILMN_23676	PHC3	NM_024947.2	NM_024947.2		80012	21359977	NM_024947.2	PHC3	NP_079223.2	ILMN_1792353	0006020600	S	2777	GTCTGGGCCTTCATCCATTCTTTGCCTGGTTGCCAGGATATCGCAGATGA	3	-	171297844-171297866:171302961-171302987	3q26.2b	Homo sapiens polyhomeotic homolog 3 (Drosophila) (PHC3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12729; HPH3; EDR3; DKFZp313K1221; FLJ12967; MGC88144	FLJ12729; HPH3; EDR3; DKFZp313K1221; FLJ12967; MGC88144
Homo sapiens	RefSeq	NM_031866.1	ILMN_30050	FZD8	NM_031866.1	NM_031866.1		8325	13994189	NM_031866.1	FZD8	NP_114072.1	ILMN_1729368	0003290301	S	2829	CATTGCCCTCTCCCCCGCCTCTTCTGAGCTGTCACCTTTAAAGTGCTTGC	10	-	35967490-35967539	10p11.21b	Homo sapiens frizzled homolog 8 (Drosophila) (FZD8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11295046] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4926] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with Wnt-protein, a secreted growth factor involved in signaling [goid 17147] [evidence IEA]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [pmid 11295046] [evidence TAS]	hFZ8; FZ-8	hFZ8; FZ-8
Homo sapiens	RefSeq	NM_014393.1	ILMN_20785	STAU2	NM_014393.1	NM_014393.1		27067	7657624	NM_014393.1	STAU2	NP_055208.1	ILMN_1769720	0007550139	S	3578	GAGCAGAATCTCCGGGAAATGACTTAGTCTGGCCACATGCATAGCCCATC	8	-	74624808-74624857	8q21.11a	Homo sapiens staufen, RNA binding protein, homolog 2 (Drosophila) (STAU2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with double-stranded RNA [goid 3725] [pmid 10585778] [evidence TAS]	39K2; 39K3; MGC119606; DKFZp781K0371	39K2; 39K3; MGC119606; DKFZp781K0371
Homo sapiens	RefSeq	NM_012483.1	ILMN_13145	GNLY	NM_012483.1	NM_012483.1		10578	7108345	NM_012483.1	GNLY	NP_036615.1	ILMN_2256295	0004920612	I	235	GCAAGAACACTTCTGGAAGGGAGAGTGGATTTGGCTGGGCCTCTGGATGG	2	+	85775576-85775623:85775624-85775625	2p11.2f	Homo sapiens granulysin (GNLY), transcript variant 519, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2212946] [evidence TAS]	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 9756476] [evidence TAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IEA]		D2S69E; 519; LAG2; NKG5; LAG-2; TLA519	D2S69E; 519; LAG2; NKG5; LAG-2; TLA519
Homo sapiens	RefSeq	NM_012483.1	ILMN_13145	GNLY	NM_012483.1	NM_012483.1		10578	7108345	NM_012483.1	GNLY	NP_036615.1	ILMN_1790692	0005360064	A	654	CTACAGGTCCCCTCTGAGCCCTCTCACCTTGTCCTGTGGAAGAAGCACAG	2	+	85778301-85778311:85779198-85779208:85779209-85779236	2p11.2f	Homo sapiens granulysin (GNLY), transcript variant 519, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2212946] [evidence TAS]	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 9756476] [evidence TAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IEA]		D2S69E; 519; LAG2; NKG5; LAG-2; TLA519	D2S69E; 519; LAG2; NKG5; LAG-2; TLA519
Homo sapiens	RefSeq	XM_937752.1	ILMN_35385	LOC648682	XM_937752.1	XM_937752.1		648682	88957928	XM_937752.1	LOC648682	XP_942845.1	ILMN_1699011	0006520470	S	261	CTGCCCACTCCCCATAGTGTTGCCTCTCCCCTTTCCTCTTTAAGACGCAG					PREDICTED: Homo sapiens hypothetical protein LOC648682 (LOC648682), mRNA.					
Homo sapiens	RefSeq	XM_931073.1	ILMN_42406	LOC642343	XM_931073.2	XM_931073.2		642343	113421509	XM_931073.2	LOC642343	XP_936166.1	ILMN_1709615	0001410072	S	67	TGAAGTGGAGTGAACTCTCAGTTTTCAGTTGCTCACCTTAGATTCAAACT	10	-	49615998-49616047	10q11.22d	PREDICTED: Homo sapiens hypothetical LOC642343 (LOC642343), mRNA.					
Homo sapiens	RefSeq	NM_001042590.1	ILMN_174525	TMEM8B	NM_001042590.1	NM_001042590.1		51754	110556645	NM_001042590.1	TMEM8B	NP_001036055.1	ILMN_2318459	0004180601	A	1612	TCACGAGGTGCCCTTGAGCCTGGGGGATGCAGCAGTGACCTGTTCCAAAG	9	+	35831722-35831771	9p13.3a	Homo sapiens transmembrane protein 8B (TMEM8B), transcript variant 1, mRNA.				NGX6; RP11-112J3.10; NAG-5; MGC120460	NGX6; RP11-112J3.10; NAG-5; MGC120460
Homo sapiens	RefSeq	NM_002666.3	ILMN_27731	PLIN	NM_002666.3	NM_002666.3		5346	54112124	NM_002666.3	PLIN	NP_002657.2	ILMN_1665562	0003800524	S	2559	CCCGAGCTCCCCTGTTCCCCTTCATTGAAAACCACCACGGTGCCATCTCT	15	-	88008902-88008951	15q26.1b	Homo sapiens perilipin (PLIN), mRNA.	A subcellular organelle of plant cells surrounded by 'half-unit' or a monolayer membrane instead of the more usual bilayer. A droplet of triacylglycerol surrounded by a monolayer of phospholipids, interacting with the triacylglycerols and the hydrophilic head groups facing the cytosol, and containing major protein components called oleosins [goid 12511] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [pmid 9521880] [evidence NAS]	PERI	PERI
Homo sapiens	RefSeq	NM_018204.2	ILMN_307721	CKAP2	NM_001098525.1	NM_001098525.1		26586	148664200	NM_001098525.1	CKAP2	NP_001091995.1	ILMN_1674411	0001050672	S	2801	CTTGCGTCCCTTGGACTGCCTGTTGATTGATGGAAAGTGTCTGCACTGAC	13	+	51947829-51947878	13q14.3d	Homo sapiens cytoskeleton associated protein 2 (CKAP2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		TMAP; FLJ10749; DKFZp686L1238; LB1; se20-10	TMAP; FLJ10749; LB1; se20-10
Homo sapiens	RefSeq	NM_001080116.1	ILMN_178462	LDB3	NM_001080116.1	NM_001080116.1		11155	122056618	NM_001080116.1	LDB3	NP_001073585.1	ILMN_2238389	0005310608	I	39	GTGTGGACCGGGCAGGCGGAGTGCCTGAGTGCCCTCTCACTCAACCCTCT	10	+	88418339-88418388	10q23.2a	Homo sapiens LIM domain binding 3 (LDB3), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10427098] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10427098] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PDLIM6; CYPHER; ldb3z4; KIAA0613; ZASP; ldb3z1; KIAA01613; ORACLE	PDLIM6; CYPHER; ldb3z4; KIAA0613; ZASP; ldb3z1; KIAA01613; ORACLE
Homo sapiens	RefSeq	NM_001080116.1	ILMN_178462	LDB3	NM_001080116.1	NM_001080116.1		11155	122056618	NM_001080116.1	LDB3	NP_001073585.1	ILMN_2305599	0002900646	A	821	GGCCCAGATGACGGGGACAGAATTCATGCAAGACCCTGATGAAGAAGCTC	10	+	88436933-88436982	10q23.2a	Homo sapiens LIM domain binding 3 (LDB3), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10427098] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10427098] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PDLIM6; CYPHER; ldb3z4; KIAA0613; ZASP; ldb3z1; KIAA01613; ORACLE	PDLIM6; CYPHER; ldb3z4; KIAA0613; ZASP; ldb3z1; KIAA01613; ORACLE
Homo sapiens	RefSeq	XM_938269.1	ILMN_44462	LOC649203	XM_938269.1	XM_938269.1		649203	88952529	XM_938269.1	LOC649203	XP_943362.1	ILMN_1661781	0004670324	S	686	TGAGACCTTTGACTGTGGGCATGAGGAGGATGCAGGAGCAGTGTGTGGTG				1q23.1d	PREDICTED: Homo sapiens similar to macrophage scavenger receptor 2 (LOC649203), mRNA.					
Homo sapiens	RefSeq	NM_014157.2	ILMN_28091	CCDC113	NM_014157.2	NM_014157.2		29070	19923431	NM_014157.2	CCDC113	NP_054876.2	ILMN_1775520	0004590100	S	4669	GGACATGAGAACATATTTCCAAGACAGAGGATTCTATGGGGACGGGTCAC	16	+	56874661-56874710	16q21a	Homo sapiens coiled-coil domain containing 113 (CCDC113), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11256614] [evidence IDA]			HSPC065; FLJ23555; DKFZP434N1418	HSPC065; FLJ23555; DKFZP434N1418
Homo sapiens	RefSeq	NM_014961.2	ILMN_22291	RUFY3	NM_014961.2	NM_014961.2		22902	41281576	NM_014961.2	RUFY3	NP_055776.1	ILMN_1730931	0004040471	S	3852	CAGGCCCAGTGCTGAGTTCTTTGTCCACTTAGTCACACATCTTTTGTGGG	4	+	71877725-71877774	4q13.3b	Homo sapiens RUN and FYVE domain containing 3 (RUFY3), transcript variant 2, mRNA.	Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [evidence ISS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0871; SINGAR1; RIPX	KIAA0871; SINGAR1; RIPX
Homo sapiens	RefSeq	NM_199005.1	ILMN_168949	ZNF322B	NM_199005.1	NM_199005.1		387328	39841070	NM_199005.1	ZNF322B	NP_945356.1	ILMN_2224290	0006560594	S	2224	GCTTGTTCTGGGAGAAGCTAGGGCGGGTCAGAGTAGACCTGATGGGTAAC	9	-	99959637-99959686	9q22.33a	Homo sapiens zinc finger protein 322B (ZNF322B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF322; FLJ23393	ZNF322; FLJ23393
Homo sapiens	RefSeq	XM_001721110.1	ILMN_343380	LOC100133123	XM_001721110.1	XM_001721110.1		100133123	169216767	XM_001721110.1	LOC100133123	XP_001721162.1	ILMN_3285532	0006100021	M	422	TCAGCTGAAGACGGGGTCCTTGTCACACGGCCACGAAAATTTAGGCTTGC	X	+	13268076-13268125	Xp22.2	PREDICTED: Homo sapiens similar to hCG1809003 (LOC100133123), mRNA.					
Homo sapiens	RefSeq	XM_372343.1	ILMN_16169	LOC390031	XM_372343.1	XM_372343.1		390031	41200927	XM_372343.1	LOC390031	XP_372343.1	ILMN_3199598	0004890019	A	439	GATGCCACCCTGGGAGCTTTCCTCATCTGTGAGATTTGCCAGTGCCTGCA	11	-	4219958-4220007	11p15.4d	PREDICTED: Homo sapiens similar to hCG1991759 (LOC390031), mRNA.					
Homo sapiens	RefSeq	XM_937571.1	ILMN_45873	LOC648521	XM_937571.1	XM_937571.1		648521	89059108	XM_937571.1	LOC648521	XP_942664.1	ILMN_1793413	0003140398	S	126	GGTCATGCACGCGGCGGATCCTCTGGAGATCCAGGCTGACGTGCACTGGA					PREDICTED: Homo sapiens similar to Molecule interacting with Rab13 (MIRab13) (MICAL-like protein 1) (LOC648521), mRNA.					
Homo sapiens	Unigene	Hs.562888	ILMN_115889	HS.562888	Hs.562888		Hs.562888		19758690	BQ023411			ILMN_1890819	0005220288	S	366	AGCAGCAATCCTGGGCAGCACTCTCATTTCCGCAACTAGCCAGGCACCCT	2	+	174572254-174572303		UI-1-BB1p-avd-b-02-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-avd-b-02-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_939037.1	ILMN_33734	LOC649956	XM_939037.1	XM_939037.1		649956	89038970	XM_939037.1	LOC649956	XP_944130.1	ILMN_1725407	0006290156	S	122	TCTCTATCTTTGTGCTTCCTGCCGTGGTCCCCTCACCCCGTCCAGAGCTG					PREDICTED: Homo sapiens hypothetical protein LOC649956 (LOC649956), mRNA.					
Homo sapiens	RefSeq	NM_001003395.1	ILMN_13015	TPD52L1	NM_001003395.1	NM_001003395.1		7164	51173743	NM_001003395.1	TPD52L1	NP_001003395.1	ILMN_1670719	0005420035	I	71	AGGGAATGTGACTCTTTTCGCCCAGCGCCGTGGACTCGCGGCTTGTGGCT	6	+	125475490-125475539	6q22.31e	Homo sapiens tumor protein D52-like 1 (TPD52L1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12963375] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16112108] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 12963375] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 16112108] [evidence IDA]	Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 16112108] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9484778] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9484778] [evidence IDA]	D53; MGC8556; hD53; TPD52L2	D53; MGC8556; hD53; TPD52L2
Homo sapiens	Unigene	Hs.127016	ILMN_76360	HS.127016	Hs.127016		Hs.127016		28290374	BX119471			ILMN_1907812	0002140722	S	303	CCTTCAGCAGGCATAAATCACCTACAGAGGCAGTGGCAACATGGTCCTCG	14	-	87693514-87693563		BX119471 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998N194004 ; IMAGE:1579986, mRNA sequence					
Homo sapiens	RefSeq	NM_000804.2	ILMN_183928	FOLR3	NM_000804.2	NM_000804.2		2352	9257219	NM_000804.2	FOLR3	NP_000795.2	ILMN_1730454	0004010181	S	759	GCCCCGTCTCGTGGGATTATTGATTCCTGATCCAAGAAGGGTCCTCTGGG	11	+	71528496-71528523:71528524-71528545	11q13.4a	Homo sapiens folate receptor 3 (gamma) (FOLR3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8110752] [evidence TAS]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [pmid 8110752] [evidence TAS]	The directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 15884] [pmid 8110752] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [pmid 8110752] [evidence TAS]	FR-gamma; gamma-hFR; FR-G	FR-gamma; gamma-hFR; FR-G
Homo sapiens	RefSeq	XR_038094.1	ILMN_350942	LOC730286	XR_038094.1	XR_038094.1		730286	169169993	XR_038094.1	LOC730286		ILMN_3305772	0006510333	M	436	CCAGGCCCAAGTCGTCCTCAAGTCGGCCTGGAAGTGGGCCTGGAAGAGCT	7	-	56844844-56844890:56845040-56845042	7p11.2a	PREDICTED: Homo sapiens misc_RNA (LOC730286), miscRNA.					
Homo sapiens	RefSeq	NM_018397.1	ILMN_8526	CHDH	NM_018397.1	NM_018397.1		55349	27501455	NM_018397.1	CHDH	NP_060867.1	ILMN_2135321	0003520437	S	1976	CAGCGCTAAGACAGTTGCTGCTGGAGGATGACCAGGGAAGCCCCCTGATA	3	-	53826800-53826843:53826844-53826849	3p21.1b	Homo sapiens choline dehydrogenase (CHDH), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells [goid 6066] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: choline + acceptor = betaine aldehyde + reduced acceptor [goid 8812] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]		
Homo sapiens	RefSeq	NM_032793.2	ILMN_12902	MFSD2	NM_032793.2	NM_032793.2		84879	42713695	NM_032793.2	MFSD2	NP_116182.2	ILMN_1789638	0003840196	S	1696	GCAGCTCTGGCTGCTCAGAAACAGACTCCACAGAGCTGGCTAGCATCCTC	1	+	40207775-40207824	1p34.2d	Homo sapiens major facilitator superfamily domain containing 2 (MFSD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		FP1147; PP10484; HMFN0656; FLJ14490; RP3-342P20.1; FLJ35904	FP1147; PP10484; HMFN0656; FLJ14490; RP3-342P20.1; FLJ35904
Homo sapiens	RefSeq	NM_014641.1	ILMN_177773	MDC1	NM_014641.1	NM_014641.1		9656	7661965	NM_014641.1	MDC1	NP_055456.1	ILMN_1814122	0005420520	S	6724	TGGGGTCAGGAACTTGAAGGGATGCTTGGAGTGAGTAGATTTGAGGGTCC	6	-	30775730-30775779	6p21.33b	Homo sapiens mediator of DNA damage checkpoint 1 (MDC1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15604234] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12607003] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12556884] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12607005] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18001824] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17525332] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12607005] [evidence IPI]	NFBD1; DKFZp781A0122; KIAA0170	DKFZp781A0122; NFBD1; KIAA0170
Homo sapiens	RefSeq	NM_020137.3	ILMN_27811	GRIPAP1	NM_020137.3	NM_020137.3		56850	46592990	NM_020137.3	GRIPAP1	NP_064522.3	ILMN_1761176	0000540678	I	2762	AGGGGCAGGGATTTCTCCTTCTTCTTGGTCCTGGCTCCCAAGGGCTTCTG	X	-	48830354-48830403	Xp11.23c	Homo sapiens GRIP1 associated protein 1 (GRIPAP1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp434P0630; MGC126593; GRASP-1; KIAA1167; MGC126595	DKFZp434P0630; MGC126593; GRASP-1; KIAA1167; MGC126595
Homo sapiens	RefSeq	NM_020137.3	ILMN_27811	GRIPAP1	NM_020137.3	NM_020137.3		56850	46592990	NM_020137.3	GRIPAP1	NP_064522.3	ILMN_1719857	0003450414	A	2038	CCTCCTTCAGCTACCGGGAGATCTTGCGGGAAAAGGAGAGCTCGGCTGTT	X	-	48834725-48834774	Xp11.23c	Homo sapiens GRIP1 associated protein 1 (GRIPAP1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp434P0630; MGC126593; GRASP-1; KIAA1167; MGC126595	DKFZp434P0630; MGC126593; GRASP-1; KIAA1167; MGC126595
Homo sapiens	Unigene	Hs.450953	ILMN_93761	HS.450953	Hs.450953		Hs.450953		13748453	BG459947			ILMN_1839532	0000450730	S	87	CCAGGGAAATTGGGCATTGCTTCCAGAAGACATGAAGAAACCTGCAGCAG	13	-	33171161-33171210		RST42356 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NR_029503.1	ILMN_387972	MIR29A	NR_029503.1	NR_029503.1		407021	262205706	NR_029503.1	MIR29A		ILMN_3310910	0002760687	S	11	CTTTTGGTGTTCAGAGTCAATATAATTTTCTAGCACCATCTGAAATCGGT				7q32.3a	Homo sapiens microRNA 29a (MIR29A), microRNA.					
Homo sapiens	RefSeq	NM_003108.3	ILMN_28038	SOX11	NM_003108.3	NM_003108.3		6664	30581115	NM_003108.3	SOX11	NP_003099.1	ILMN_1773459	0003180187	I	8544	CAGTGGCTTGTGCTTGTGCTTCGATCTAACCAGCTTCTTGACCCACCCCC	2	+	5758793-5758842	2p25.2b	Homo sapiens SRY (sex determining region Y)-box 11 (SOX11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8666406] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	NM_020456.1	ILMN_13654	C13ORF1	NM_020456.1	NM_020456.1		57213	20531764	NM_020456.1	C13orf1	NP_065189.1	ILMN_2223350	0004010554	S	2686	GACACTCTCAGAACCCACACCAGACCCACCAAATCAGTTTGAGAACTGCC	13	-	49385160-49385209	13q14.3a	Homo sapiens chromosome 13 open reading frame 1 (C13orf1), mRNA.				CLLD6	CLLD6
Homo sapiens	RefSeq	NM_175907.3	ILMN_5633	ZADH2	NM_175907.3	NM_175907.3		284273	51036599	NM_175907.3	ZADH2	NP_787103.1	ILMN_1795063	0006040743	S	3883	ATTTCTCAGCGTGGACTTCTCTGCATGTCGGGCTTAGGGTCACCAGCCGG	18	-	71039664-71039713	18q22.3d	Homo sapiens zinc binding alcohol dehydrogenase domain containing 2 (ZADH2), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC45594	MGC45594
Homo sapiens	RefSeq	NM_030979.2	ILMN_19855	PABPC3	NM_030979.2	NM_030979.2		5042	45238848	NM_030979.2	PABPC3	NP_112241.2	ILMN_1718128	0004220600	S	1220	GCAAGTGTACGAGCTGTGCCCAACCAGCGAGCACCTCCTTCAGGTTACTT	13	+	24569495-24569544	13q12.13a	Homo sapiens poly(A) binding protein, cytoplasmic 3 (PABPC3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11328870] [evidence NAS]	The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [pmid 11328870] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [pmid 11328870] [evidence IDA]	PABP3; PABPL3	PABP3; PABPL3
Homo sapiens	RefSeq	NM_030979.2	ILMN_19855	PABPC3	NM_030979.2	NM_030979.2		5042	45238848	NM_030979.2	PABPC3	NP_112241.2	ILMN_2223293	0001780377	S	2291	CCTTTAATTTTTTAATTCTTTACTGTGGAATAGCTCAAAATGTCCATTCT	13	+	24570566-24570615	13q12.13a	Homo sapiens poly(A) binding protein, cytoplasmic 3 (PABPC3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11328870] [evidence NAS]	The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [pmid 11328870] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [pmid 11328870] [evidence IDA]	PABP3; PABPL3	PABP3; PABPL3
Homo sapiens	RefSeq	NM_000158.1	ILMN_2925	GBE1	NM_000158.2	NM_000158.2		2632	119393896	NM_000158.2	GBE1	NP_000149.2	ILMN_1789702	0006280176	S	2381	CTGCCGAATTGAAGAGGCCTGATTTCAGCTCCACCAGATGCAGATTTGTG	3	-	81622208-81622247:81622248-81622257	3p12.3a-p12.2b	Homo sapiens glucan (1,4-alpha-), branching enzyme 1 (glycogen branching enzyme, Andersen disease, glycogen storage disease type IV) (GBE1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8613547] [evidence EXP]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 8613547] [evidence TAS]	Catalysis of the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxyl group in a similar glucan chain [goid 3844] [pmid 8613547] [evidence TAS]; Catalysis of the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxyl group in a similar glucan chain [goid 3844] [pmid 8613547] [evidence EXP]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GBE	GBE
Homo sapiens	RefSeq	NM_145244.2	ILMN_20228	DDIT4L	NM_145244.2	NM_145244.2		115265	34222182	NM_145244.2	DDIT4L	NP_660287.1	ILMN_1696537	0000380019	S	2353	AGCTCCAAAGGTTCACTGTGTTTCTGCCGCTGTCCTGGAGTTGTCACCAC	4	-	101326239-101326288	4q23b	Homo sapiens DNA-damage-inducible transcript 4-like (DDIT4L), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]		Rtp801L; REDD2	Rtp801L; REDD2
Homo sapiens	RefSeq	NM_018946.2	ILMN_13777	NANS	NM_018946.2	NM_018946.2		54187	12056472	NM_018946.2	NANS	NP_061819.2	ILMN_1815874	0001510390	S	769	GGTGTTGGAACGTCACATAACTTTGGACAAGACCTGGAAGGGGAGTGACC	9	+	99883014-99883063	9q22.33b	Homo sapiens N-acetylneuraminic acid synthase (sialic acid synthase) (NANS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10749855] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [pmid 10749855] [evidence NAS]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]	Catalysis of the reaction: CTP + N-acylneuraminate = diphosphate + CMP-N-acylneuraminate [goid 8781] [pmid 10749855] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA];  [goid 19007] [evidence IEA]; Catalysis of the reaction: H2O + phosphoenolpyruvate + N-acyl-D-mannosamine 6-phosphate = phosphate + N-acylneuraminate 9-phosphate [goid 47444] [evidence IEA]; Catalysis of the reaction: phosphoenolpyruvate + N-acetyl-D-mannosamine + H2O = phosphate + N-acetylneuraminate  [goid 50462] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA];  [goid 19007] [evidence IEA]	SAS	SAS
Homo sapiens	RefSeq	NR_002591.1	ILMN_12141	SNORD95	NR_002591.1	NR_002591.1		619570	77993293	NR_002591.1	SNORD95		ILMN_3243452	0006400592	S	2	CGGTGATGACCCCAACATGCCATCTGAGTGTCGGTGCTGAAATCCAGAGG	5	-	180670325-180670374	5q35.3g	Homo sapiens small nucleolar RNA, C/D box 95 (SNORD95), small nucleolar RNA.				U95	U95
Homo sapiens	RefSeq	XM_001719837.1	ILMN_343563	LOC100130663	XM_001719837.1	XM_001719837.1		100130663	169168159	XM_001719837.1	LOC100130663	XP_001719889.1	ILMN_3186439	0004780497	A	586	CGAAACAAAACCTTCCTCCACCACGGCTACACAGAGCTCGCGTCCGAGGA				5q35.3f	PREDICTED: Homo sapiens hypothetical LOC100130663 (LOC100130663), mRNA.					
Homo sapiens	RefSeq	NM_002284.2	ILMN_2465	KRTHB6	NM_002284.2	NM_002284.2		3892	15431325	NM_002284.2	KRTHB6	NP_002275.1	ILMN_1811984	0005720053	I	1826	TCAAAGCTTGGAGGAACGGGGGAGGGCCCGGGAATGTCCCTGTCTGCACG	12	+	50988949-50988998	12q13.13d	Homo sapiens keratin, hair, basic, 6 (monilethrix) (KRTHB6), mRNA.				hHb6; KRTHB1; Hb1; MNX; HB6	hHb6; KRTHB1; Hb1; MNX; HB6
Homo sapiens	RefSeq	NM_178429.2	ILMN_163764	LCE2C	NM_178429.2	NM_178429.2		353140	57242770	NM_178429.2	LCE2C	NP_848516.1	ILMN_1709708	0005690224	S	515	CCTGGAAGAACTTCGTGCTTGATGTAACACCCCAATTGCAAGTCTTCTTT	1	+	150915575-150915624	1q21.3b	Homo sapiens late cornified envelope 2C (LCE2C), mRNA.		The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		LEP11	LEP11
Homo sapiens	RefSeq	XM_001721845.1	ILMN_346842	LOC100128905	XM_001721845.1	XM_001721845.1		100128905	169163414	XM_001721845.1	LOC100128905	XP_001721897.1	ILMN_3190192	0005260296	A	1633	GGCTTAAAGAGACCGAAGCCACGTAACAACCAAATGCAATGTGTGGGCCG	2	+	174599886-174599935	2q31.1f	PREDICTED: Homo sapiens hypothetical protein LOC100128905 (LOC100128905), mRNA.					
Homo sapiens	RefSeq	NM_178044.1	ILMN_25461	GIYD2	NM_178044.1	NM_178044.1		79008	30089944	NM_178044.1	GIYD2	NP_835145.1	ILMN_2407605	0001030224	A	723	GTGGGTCCAGCAGGTTTTTACTTGAGTACAATAAAAAGTCTGAGTCAAAA	16	+	29376994-29377041:29465875-29465876	16p11.2d	Homo sapiens GIY-YIG domain containing 2 (GIYD2), transcript variant 2, mRNA.				MGC5178; MGC2532; FLJ23439	MGC5178; MGC2532; FLJ23439
Homo sapiens	RefSeq	NM_139281.2	ILMN_162055	WDR36	NM_139281.2	NM_139281.2		134430	71164895	NM_139281.2	WDR36	NP_644810.1	ILMN_1727184	0006650100	S	6255	CCGAGTGCAGTCCTCCCTTGGTATCTAGTTCCAGGACCCCTGTGGATACC	5	+	110465169-110465218	5q22.1a	Homo sapiens WD repeat domain 36 (WDR36), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	UTP21; DKFZp686I1650; TA-WDRP; GLC1G; TAWDRP	DKFZp686I1650; TA-WDRP
Homo sapiens	RefSeq	XM_001719832.1	ILMN_347146	LOC100133567	XM_001719832.1	XM_001719832.1		100133567	169218131	XM_001719832.1	LOC100133567	XP_001719884.1	ILMN_3245292	0001230494	S	61	AAAACTGCATCTTACTGACAGTCTCCACCCACAGGTGACCCACGTTTCTT					PREDICTED: Homo sapiens similar to RAPGEF2 protein (LOC100133567), partial mRNA.					
Homo sapiens	RefSeq	NM_032538.1	ILMN_180580	TTBK1	NM_032538.1	NM_032538.1		84630	58761547	NM_032538.1	TTBK1	NP_115927.1	ILMN_1763231	0002710593	S	6831	CAGCTCCTCACAGAGGCCTGGTTTGCTCAGTCTTCTGAACTCCAGGGACC	6	+	43255700-43255749	6p21.1d	Homo sapiens tau tubulin kinase 1 (TTBK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	BDTK; KIAA1855; RP3-330M21.4	BDTK; KIAA1855; RP3-330M21.4
Homo sapiens	RefSeq	NM_001005239.1	ILMN_13826	OR11H1	NM_001005239.1	NM_001005239.1		81061	52546690	NM_001005239.1	OR11H1	NP_001005239.1	ILMN_1669995	0005690673	S	467	ATGCCAAACTGGTCATACTGTGCTGGGTTTGTGGATTTCTGTGGTTCCTG	22	-	16449288-16449337	22q11.1c	Homo sapiens olfactory receptor, family 11, subfamily H, member 1 (OR11H1), mRNA.				OR22-1	OR22-1
Homo sapiens	RefSeq	XM_929223.1	ILMN_44998	LOC646280	XM_929223.1	XM_929223.1		646280	88982549	XM_929223.1	LOC646280	XP_934316.1	ILMN_1808721	0006270242	S	100	TTGAGAGTAGCCAAGGGACTTGAGCCTTGCAGAGCCACCGGGGTGAAGGT	5	+	20056815-20056864		PREDICTED: Homo sapiens hypothetical protein LOC646280 (LOC646280), mRNA.					
Homo sapiens	RefSeq	NM_182611.1	ILMN_9072	GPR144	NM_182611.1	NM_182611.1		347088	32699041	NM_182611.1	GPR144	NP_872417.1	ILMN_1798488	0003780026	S	2540	AGATCTGGACCCAGATATGGGCCACGGTGAAGCCCGTGCTGGTCCTGCTG	9	+	126271629-126271647:126272594-126272624	9q33.3a	Homo sapiens G protein-coupled receptor 144 (GPR144), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PGR24	PGR24
Homo sapiens	RefSeq	NM_003506.2	ILMN_25538	FZD6	NM_003506.2	NM_003506.2		8323	34734078	NM_003506.2	FZD6	NP_003497.2	ILMN_1659297	0002190553	S	3336	CAGTACCTTTCTCAGACATTTTGTAGAATTCATTTCGGCAGCTCACTAGG	8	+	104413852-104413901	8q22.3c	Homo sapiens frizzled homolog 6 (Drosophila) (FZD6), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9480858] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The apical end of the lateral plasma membrane of epithelial cells [goid 16327] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IEA]	Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates [goid 1736] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9480858] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4926] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [pmid 9480858] [evidence TAS]	Hfz6	Hfz6
Homo sapiens	RefSeq	NM_006350.2	ILMN_177266	FST	NM_006350.2	NM_006350.2		10468	7242223	NM_006350.2	FST	NP_006341.1	ILMN_1712896	0001260068	I	1147	TGGCTGTATCAGAGGGCTTTGAAAACATACACTGAGCTGCTTCTGCGCTG	5	+	52781684-52781733	5q11.2c	Homo sapiens follistatin (FST), transcript variant FST317, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 12702211] [evidence IDA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IEA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of follicle-stimulating hormone [goid 46882] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [pmid 12514121] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12697670] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16198295] [evidence IPI]; Acts to negatively regulate the activity of activin, a nonsteroidal regulator synthesized in the pituitary gland and gonads that stimulates the secretion of follicle-stimulating hormone [goid 17106] [pmid 12702211] [evidence NAS]	FS	FS
Homo sapiens	RefSeq	XM_001720553.1	ILMN_336830	LOC391556	XM_001720553.1	XM_001720553.1		391556	169165526	XM_001720553.1	LOC391556	XP_001720605.1	ILMN_3277826	0002360504	M	244	GTCCCGGGTACACACACATCAGTTGAACAAAACCACCTTGTGCAGCTTCC				3q11.2c	PREDICTED: Homo sapiens similar to hCG1643855 (LOC391556), mRNA.					
Homo sapiens	RefSeq	XM_929957.1	ILMN_308476	PLGLA	NR_003506.1	NR_003506.1		285189	140972276	NR_003506.1	PLGLA		ILMN_1767277	0001260367	A	16460	TGTGATAATGGCTGAAAACAAGAAGTCCTCCATAATCATTAGGATGAGAG				2q12.2b	Homo sapiens plasminogen-like A (PLGLA) on chromosome 2.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			PRGA; PLGP2; PLGLA1	
Homo sapiens	RefSeq	XM_934124.1	ILMN_308476	PLGLA	NR_003506.1	NR_003506.1		285189	140972276	NR_003506.1	PLGLA		ILMN_1663802	0004060278	I	16837	GAGATGGGAAGTCTAAGCATTCCTTTTGGTCTTGGCTTCTTATTCTGCAG				2q12.2b	Homo sapiens plasminogen-like A (PLGLA) on chromosome 2.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			PRGA; PLGP2; PLGLA1	
Homo sapiens	RefSeq	XM_927913.1	ILMN_308476	PLGLA	NR_003506.1	NR_003506.1		285189	140972276	NR_003506.1	PLGLA		ILMN_1662807	0003370494	S	7261	GAAGCTTCCCATTTAGGTGGGTCCTAATTTGGAGGGCTATGGCTCACTGC				2q12.2b	Homo sapiens plasminogen-like A (PLGLA) on chromosome 2.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			PRGA; PLGP2; PLGLA1	
Homo sapiens	RefSeq	NM_152436.1	ILMN_12789	GLIPR1L2	NM_152436.1	NM_152436.1		144321	22748922	NM_152436.1	GLIPR1L2	NP_689649.1	ILMN_1769559	0007400204	S	1370	TCTACATTAGATATTTCTCCTAAGCTATTCCTCCCCTAGCCCTGACCCCC	12	+	74103728-74103777	12q21.1c-q21.2a	Homo sapiens GLI pathogenesis-related 1 like 2 (GLIPR1L2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC39497	MGC39497
Homo sapiens	RefSeq	XM_929620.1	ILMN_166228	LOC400174	XR_016147.1	XR_016147.1		400174	113424514	XR_016147.1	LOC400174		ILMN_1683552	0003990291	S	738	GCAGACCCTGGCCCAATCCTAACAGTGCTAACTCAATTCCATACTCCTCC	14	+	19207565-19207614	14q11.2a	PREDICTED: Homo sapiens similar to single stranded DNA binding protein 3 (LOC400174), mRNA.					
Homo sapiens	RefSeq	NM_201428.1	ILMN_163355	RTN3	NM_201428.1	NM_201428.1		10313	41393607	NM_201428.1	RTN3	NP_958831.1	ILMN_1651652	0002640170	I	2285	GGAAGTGAGCCTCTAGGTGTTTTCCCTACCCAAGGTACTCCAGTAGCATC	11	+	63244705-63244754	11q13.1a	Homo sapiens reticulon 3 (RTN3), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10331947] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]		NSPLII; NSPL2; ASYIP; HAP; RTN3-A1	NSPLII; NSPL2; ASYIP; HAP; RTN3-A1
Homo sapiens	RefSeq	XM_930273.1	ILMN_137819	LOC647229	XM_930273.1	XM_930273.1		647229	89040324	XM_930273.1	LOC647229	XP_935366.1	ILMN_1708625	0005090369	S	2360	CATGACTCTAGAGGACCACATGTGAAATGCAACAAGCAGGAGCAGAAGAC	16	-	33668931-33668980	16p11.2b	PREDICTED: Homo sapiens similar to Ig heavy chain V-I region V35 precursor (LOC647229), mRNA.					
Homo sapiens	RefSeq	NM_145813.1	ILMN_22104	AIFM1	NM_145813.1	NM_145813.1		9131	22202630	NM_145813.1	AIFM1	NP_665812.1	ILMN_2313821	0001500689	A	1169	GTGGAATTGGCAAACCCACTGCAGCCCCTGAGAGGAGGTCGAATGGGTAA	X	-	129263472-129263521	Xq25h	Homo sapiens apoptosis-inducing factor, mitochondrion-associated, 1 (AIFM1), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9989411] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9989411] [evidence TAS]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 9989411] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 9989411] [evidence TAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9989411] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	MGC111425; PDCD8; AIF	MGC111425; PDCD8; AIF
Homo sapiens	RefSeq	NM_004208.2	ILMN_22104	AIFM1	NM_145813.1	NM_145813.1		9131	22202630	NM_145813.1	AIFM1	NP_665812.1	ILMN_1668408	0003290341	A	964	AGTTCCACAGGCTCCCGTCCAGGGGGAGGACTACGGCAAAGGTGTCATCT	X	-	129264018-129264067	Xq25h	Homo sapiens apoptosis-inducing factor, mitochondrion-associated, 1 (AIFM1), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9989411] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9989411] [evidence TAS]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 9989411] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 9989411] [evidence TAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9989411] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	MGC111425; PDCD8; AIF	MGC111425; PDCD8; AIF
Homo sapiens	RefSeq	NR_002145.1	ILMN_12923	OR2L1P	NR_002145.1	NR_002145.1		26247	48597027	NR_002145.1	OR2L1P		ILMN_1663925	0001240768	S	564	GCACGGATACCTGGGTCTATGAGTGCACGGTGTTTTTGAGCACCACCATT	1	+	246220755-246220804	1q44e	Homo sapiens olfactory receptor, family 2, subfamily L, member 1 pseudogene (OR2L1P), non-coding RNA.				HTPCRX02; HSHTPCRX02; OR2L7P; OR2L1	OR2L7P; HTPCRX02; HSHTPCRX02; OR2L1
Homo sapiens	RefSeq	NR_002145.1	ILMN_12923	OR2L1P	NR_002145.1	NR_002145.1		26247	48597027	NR_002145.1	OR2L1P		ILMN_2130158	0000870619	S	675	ACCACATGCACTCTGCAGAAGGGAGGAAGAAGGCCTATTCGACCTGCAGC	1	+	246220866-246220915	1q44e	Homo sapiens olfactory receptor, family 2, subfamily L, member 1 pseudogene (OR2L1P), non-coding RNA.				HTPCRX02; HSHTPCRX02; OR2L7P; OR2L1	OR2L7P; HTPCRX02; HSHTPCRX02; OR2L1
Homo sapiens	RefSeq	NM_173483.1	ILMN_20313	CYP4F22	NM_173483.2	NM_173483.2		126410	142377118	NM_173483.2	CYP4F22	NP_775754.1	ILMN_1708303	0001780279	S	2300	AGACTGCTCAGGCGTGAGGCTGGATCGTAGGGTTCGAGGCTGCTTGCTTT				19p13.12a	Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 22 (CYP4F22), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ39501	
Homo sapiens	RefSeq	NM_001031735.1	ILMN_40096	C19ORF36	NM_001039846.1	NM_001039846.1		113177	89903022	NM_001039846.1	C19orf36	NP_001034935.1	ILMN_1734346	0002000075	A	697	CAGCCTTAAGGTGTCTGGAGCCCCCACACTTGGCCAACCTGACCTTGGAA	19	+	2050265-2050314	19p13.3h	Homo sapiens chromosome 19 open reading frame 36 (C19orf36), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			IMAGE:4215339	IMAGE:4215339
Homo sapiens	RefSeq	NM_001039846.1	ILMN_40096	C19ORF36	NM_001039846.1	NM_001039846.1		113177	89903022	NM_001039846.1	C19orf36	NP_001034935.1	ILMN_2400546	0004480041	A	578	CCAGGGCCTCCTGAACTACATAAATAACTGGCACAAACAGGACACGAGCA	19	+	2049313-2049333:2049435-2049449:2049786-2049799	19p13.3h	Homo sapiens chromosome 19 open reading frame 36 (C19orf36), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			IMAGE:4215339	IMAGE:4215339
Homo sapiens	RefSeq	NM_021174.4	ILMN_163008	KIAA1967	NM_021174.4	NM_021174.4		57805	40548406	NM_021174.4	KIAA1967	NP_066997.3	ILMN_1804789	0005050047	A	3689	GGCCATCACGGGAATGGAGTCCATGCTAGAAAGAGCTCAGTGTTGGGCTG	8	+	22477693-22477742	8p21.3a	Homo sapiens KIAA1967 (KIAA1967), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15824730] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15824730] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 15824730] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 15824730] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17314511] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DBC-1; DBC1	DBC-1; DBC1
Homo sapiens	RefSeq	NM_021174.4	ILMN_163008	KIAA1967	NM_021174.4	NM_021174.4		57805	40548406	NM_021174.4	KIAA1967	NP_066997.3	ILMN_1699473	0007050092	I	239	CCGGGCCTTGCGTGGAGGGTTTTGGCGGATGTTTTTGAACGAAGGAATGT	8	+	22462789-22462838	8p21.3a	Homo sapiens KIAA1967 (KIAA1967), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15824730] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15824730] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 15824730] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 15824730] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17314511] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DBC-1; DBC1	DBC-1; DBC1
Homo sapiens	RefSeq	NM_205856.1	ILMN_23271	LOC389852	NM_205856.1	NM_205856.1		389852	45504352	NM_205856.1	LOC389852	NP_995328.1	ILMN_1672806	0005270133	S	219	CACTGTGGATGCCAAGATCTATGAACTCTGCGAGCTGGCGGCAAGACTGG	X	+	47752195-47752244	Xp11.23e	Homo sapiens PNPK6288 (LOC389852), mRNA.				dJ54B20.3; UNQ6288	dJ54B20.3; UNQ6288
Homo sapiens	RefSeq	NM_018047.1	ILMN_14115	RBM22	NM_018047.1	NM_018047.1		55696	8922327	NM_018047.1	RBM22	NP_060517.1	ILMN_1760256	0006200630	S	2157	TCACCTTCGTGTGTCTTCAGTGTCTCATTGTCATCCCTGCTTCTGTTTGG	5	-	150050639-150050688	5q33.1c	Homo sapiens RNA binding motif protein 22 (RBM22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17045351] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11278427] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [pmid 17045351] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ10290; ZC3H16	FLJ10290; ZC3H16
Homo sapiens	RefSeq	XM_940009.1	ILMN_33005	LOC650921	XM_940009.1	XM_940009.1		650921	89058005	XM_940009.1	LOC650921	XP_945102.1	ILMN_1775831	0003990195	S	1523	GAGACAAAGGGACACCTCGAAGGTGTCAGAGAGACGGTTGTTTCGGACAG					PREDICTED: Homo sapiens hypothetical protein LOC650921 (LOC650921), mRNA.					
Homo sapiens	RefSeq	NR_004391.1	ILMN_352461	RNY1	NR_004391.1	NR_004391.1		6084	161087011	NR_004391.1	RNY1		ILMN_3237623	0001010450	S	34	ATTGTTCACAGTCAGTTACAGATCGAACTCCTTGTTCTACTCTTTCCCCC	7	-	148684257-148684306		Homo sapiens RNA, Ro-associated Y1 (RNY1), small cytoplasmic RNA.				Y1; HY1	Y1; HY1
Homo sapiens	RefSeq	NM_017897.1	ILMN_6046	OXSM	NM_017897.1	NM_017897.1		54995	8923558	NM_017897.1	OXSM	NP_060367.1	ILMN_1683992	0003710746	S	1225	GTTTCCTCAACTAAGGGAGCAACAGGACATCTGCTGGGAGCTGCAGGGGC	3	+	25810735-25810784	3p24.2a	Homo sapiens 3-oxoacyl-ACP synthase, mitochondrial (OXSM), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15668256] [evidence IMP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 15668256] [evidence IDA]; The chemical reactions and pathways resulting in the formation of fatty acids with a chain length of less than 8 carbons [goid 51790] [pmid 15668256] [evidence IDA]; The chemical reactions and pathways resulting in the formation of fatty acids with a chain length of between 8 and 12 carbons [goid 51792] [pmid 15668256] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Catalysis of the reaction: acyl-[acyl-carrier protein] + malonyl-[acyl-carrier protein] = 3-oxoacyl-[acyl-carrier protein] + CO2 + [acyl-carrier protein] [goid 4315] [pmid 15668256] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ20604; FASN2D; KS	FLJ20604; FASN2D; KS
Homo sapiens	RefSeq	XR_015172.2	ILMN_173306	LOC730535	XR_015172.2	XR_015172.2		730535	169205102	XR_015172.2	LOC730535		ILMN_3297679	0007100095	M	260	GTGTTGATCTCAGCAAGCTTGCAGAAGGGGAACAATCTTATCTGGTGGAG					PREDICTED: Homo sapiens misc_RNA (LOC730535), miscRNA.					
Homo sapiens	RefSeq	NM_080827.1	ILMN_9857	WFDC6	NM_080827.1	NM_080827.1		140870	22779935	NM_080827.1	WFDC6	NP_543017.1	ILMN_1685761	0005420296	S	372	CCAGGCCTCTCTCCACGTGTGCCTGATTGATGCTCCAAATTGGCTTCCAC	20	-	44163033-44163082	20q13.12b	Homo sapiens WAP four-disulfide core domain 6 (WFDC6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	MGC126653; MGC126649; C20orf171; dJ461P17.11; WAP6	MGC126653; MGC126649; C20orf171; dJ461P17.11; WAP6
Homo sapiens	RefSeq	XR_038962.1	ILMN_340976	LOC100130383	XR_038962.1	XR_038962.1		100130383	169160884	XR_038962.1	LOC100130383		ILMN_3260026	0000540575	M	1079	CGGATTTGATAAAAGACTTATGAGCAAGCTGGTTTGGCAGACAGTATACC				1p13.2d	PREDICTED: Homo sapiens misc_RNA (LOC100130383), miscRNA.					
Homo sapiens	RefSeq	XM_001717900.1	ILMN_334442	LOC100129315	XM_001717900.1	XM_001717900.1		100129315	169209909	XM_001717900.1	LOC100129315	XP_001717952.1	ILMN_3176064	0006130594	A	607	TCCCCAGAGAAAAGGGCCACCCAGACCATCCTGCTGCTGGTGAGTTTCTT	16	+	31567823-31567872	16p11.2c	PREDICTED: Homo sapiens hypothetical protein LOC100129315 (LOC100129315), mRNA.					
Homo sapiens	RefSeq	NM_007068.2	ILMN_21290	DMC1	NM_007068.2	NM_007068.2		11144	23238218	NM_007068.2	DMC1	NP_008999.2	ILMN_1812545	0000830364	S	1610	CTCCTAAGGACTTTCCCTTCACCATTTTTCTAGGGTATAGTGCCACTGAC	22	-	38915563-38915612	22q13.1b-q13.1c	Homo sapiens DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) (DMC1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 8602360] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 8602360] [evidence TAS]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 8602360] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8590282] [evidence TAS]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [pmid 8602360] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8602360] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8602360] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	DMC1H; HsLim15; dJ199H16.1; MGC150473; MGC150472; LIM15	DMC1H; HsLim15; dJ199H16.1; MGC150473; MGC150472; LIM15
Homo sapiens	RefSeq	NR_029846.1	ILMN_388123	MIR30E	NR_029846.1	NR_029846.1		407034	262206130	NR_029846.1	MIR30E		ILMN_3309569	0006250593	S	35	AAGCTGTAAGGTGTTCAGAGGAGCTTTCAGTCGGATGTTTACAGCGGCAG				1p34.2c	Homo sapiens microRNA 30e (MIR30E), microRNA.					
Homo sapiens	RefSeq	NM_001081559.1	ILMN_178236	CPSF4	NM_001081559.1	NM_001081559.1		10898	125987602	NM_001081559.1	CPSF4	NP_001075028.1	ILMN_2357260	0005720347	A	1343	GATTTGAATGAGGGAGCCCTTTGGGGCAAATTCAGGTGCCCCCATTGCCT	7	+	98892524-98892573	7q22.1b	Homo sapiens cleavage and polyadenylation specific factor 4, 30kDa (CPSF4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NAR; NEB1; CPSF30	NAR; NEB1; CPSF30
Homo sapiens	RefSeq	NM_006693.1	ILMN_178236	CPSF4	NM_001081559.1	NM_001081559.1		10898	125987602	NM_001081559.1	CPSF4	NP_001075028.1	ILMN_1660426	0005560010	S	1655	TGTGAAACTGTCTCCTGCAACCTGCTGGGCATGTGGGCCTGGCTGTGTTC	7	+	98892836-98892885	7q22.1b	Homo sapiens cleavage and polyadenylation specific factor 4, 30kDa (CPSF4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NAR; NEB1; CPSF30	NAR; NEB1; CPSF30
Homo sapiens	RefSeq	NM_198229.2	ILMN_19624	RGS12	NM_198229.2	NM_198229.2		6002	108773790	NM_198229.2	RGS12	NP_937872.1	ILMN_2384629	0005560672	A	4850	ATCTGGAAGAGGCAGTCTCAGGAAGTGGAGGCCGGGGGCATCCAGACGGT	4	+	3318941-3318990	4p16.2c	Homo sapiens regulator of G-protein signaling 12 (RGS12), transcript variant 1, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 10869340] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9651375] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	 [goid 5057] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9651375] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 5057] [evidence IEA]	DKFZp761K1817; DKFZp761K1617	DKFZp761K1817; DKFZp761K1617
Homo sapiens	RefSeq	NM_005954.2	ILMN_11085	MT3	NM_005954.2	NM_005954.2		4504	45580728	NM_005954.2	MT3	NP_005945.1	ILMN_1675947	0003060273	S	428	CAGCTGCTGCCAGTGAGAAGGCACCCCTCCGTGTGGAGCACGTGGAGATA	16	+	55182347-55182362:55182363-55182396	16q13b	Homo sapiens metallothionein 3 (MT3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 12763630] [evidence IDA]; The regulation of the levels, transport, and metabolism of metal ions within a cell or between a cell and its external environment [goid 6875] [pmid 12383939] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 1873033] [evidence TAS]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [pmid 12383939] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of neurogenesis, the origin and formation of neurons [goid 50768] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [pmid 8751715] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence ISS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [pmid 12383939] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	GIFB; GRIF; GIF	GIFB; GRIF; GIF
Homo sapiens	RefSeq	NM_015686.2	ILMN_180918	FAM155B	NM_015686.2	NM_015686.2		27112	56676336	NM_015686.2	FAM155B	NP_056501.2	ILMN_1670076	0004830008	S	3834	CCCCCATCCCTTCCTCCCTTACCCAGCTATGATTCAGTTGTCTCTGCCCT	X	+	68668891-68668940	Xq13.1b	Homo sapiens family with sequence similarity 155, member B (FAM155B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TED; bB57D9.1	TED; bB57D9.1
Homo sapiens	RefSeq	XM_929425.1	ILMN_36565	LOC646501	XM_929425.1	XM_929425.1		646501	89052438	XM_929425.1	LOC646501	XP_934518.1	ILMN_1682067	0000450364	S	974	TTTGGAAATGATTTAATCTTTATAGAATGAGACCCTTTTTTGGACTAGCT	19	+	14764690-14764739		PREDICTED: Homo sapiens similar to CG14199-PA (LOC646501), mRNA.					
Homo sapiens	RefSeq	NM_001668.2	ILMN_18369	ARNT	NM_001668.2	NM_001668.2		405	30795243	NM_001668.2	ARNT	NP_001659.1	ILMN_1762582	0002640338	A	4672	TGCTCTGACCATGAGGTGGGGGTTTTGGGGTGGGCGTTGCCTGGGTTCTT	1	-	150782288-150782337	1q21.2c	Homo sapiens aryl hydrocarbon receptor nuclear translocator (ARNT), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1317062] [evidence TAS]	The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 8756616] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 8756616] [evidence IC ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor [goid 10575] [pmid 8756616] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [pmid 8756616] [evidence IC ]; The synthesis of messenger RNA (mRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II-specific promoter [goid 42789] [pmid 7539918] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [pmid 8089148] [evidence IDA]; Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 43619] [pmid 8089148] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [pmid 1448077] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of glycolysis [goid 45821] [pmid 8089148] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones [goid 46886] [pmid 1448077] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 8756616] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 7539918] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 1317062] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with an aryl hydrocarbon receptor [goid 17162] [pmid 9079689] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 8756616] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 7539918] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9079689] [evidence IPI]	HIF-1beta; HIF1BETA; TANGO; HIF1B	HIF-1beta; HIF1BETA; TANGO; HIF1B
Homo sapiens	Unigene	Hs.270778	ILMN_84038	HS.270778	Hs.270778		Hs.270778		34529263	AK123661			ILMN_1851610	0002360296	S	1915	CTTGTCTCATTCCTTACAAGGATACTTTGCTCTCCGACACCTTAGCTCCC	11	-	133650564-133650613		Homo sapiens cDNA FLJ41667 fis, clone FEBRA2028366					
Homo sapiens	RefSeq	NM_006832.1	ILMN_21480	FERMT2	NM_006832.1	NM_006832.1		10979	29789005	NM_006832.1	FERMT2	NP_006823.1	ILMN_1695290	0001820328	S	3104	TTCCTAGCTCACATAGCCCAAAAGGGTGCGAGGGAGAGGTGGATTACCAG	14	-	52393815-52393864	14q22.2a	Homo sapiens fermitin family homolog 2 (Drosophila) (FERMT2), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence NAS]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence NAS]	KIND2; FLJ44462; UNC112B; PLEKHC1; FLJ34213; mig-2; UNC112; MIG2	KIND2; FLJ44462; UNC112B; PLEKHC1; FLJ34213; mig-2; UNC112; MIG2
Homo sapiens	RefSeq	NM_003726.2	ILMN_23763	SKAP1	NM_003726.3	NM_003726.3		8631	115527073	NM_003726.3	SKAP1	NP_003717.3	ILMN_1751400	0004220053	S	1481	GGTGAGAGAGAAGGAAACCTTGGGAGGAGGACATTACTGGTTGTTCTGGC	17	-	46210847-46210896	17q21.32b-q21.32c	Homo sapiens src kinase associated phosphoprotein 1 (SKAP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9195899] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9195899] [evidence TAS]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [pmid 9195899] [evidence TAS]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9195899] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9195899] [evidence TAS]	SCAP1; SKAP55	SKAP55
Homo sapiens	RefSeq	XM_929978.1	ILMN_37638	LOC646997	XM_929978.1	XM_929978.1		646997	88942915	XM_929978.1	LOC646997	XP_935071.1	ILMN_1698541	0006130142	S	135	TGTGTCAACTGAGAGAGCTGAAACAGGAAGTACTGGTGTAGAAGCTGCAG	1	-	103624101-103624134:103624228-103624243		PREDICTED: Homo sapiens hypothetical protein LOC646997 (LOC646997), mRNA.					
Homo sapiens	Unigene	Hs.189987	ILMN_81038	HS.189987	Hs.189987		Hs.189987		50481445	CR600638			ILMN_1862070	0005960327	S	1310	GGCAGGGAAAACCCAAGGAGGGCTTCTCAGGAGAGACACACATTTGACTC	13	+	27969079-27969128		full-length cDNA clone CS0DI053YD12 of Placenta Cot 25-normalized of Homo sapiens (human)					
Homo sapiens	RefSeq	XM_938986.1	ILMN_46605	LOC649905	XM_938986.1	XM_938986.1		649905	89066096	XM_938986.1	LOC649905	XP_944079.1	ILMN_1706750	0005050661	S	50	TGTTGGGAGGCAGTACTTATGAATACCAGTCACATTGCCCTTTTGAGGTG					PREDICTED: Homo sapiens similar to Neurobeachin protein (Lysosomal trafficking regulator 2) (LOC649905), mRNA.					
Homo sapiens	RefSeq	NM_001018084.1	ILMN_16643	SLC26A10	NM_001018084.1	NM_001018084.1		65012	66347822	NM_001018084.1	SLC26A10	NP_001018094.1	ILMN_1732371	0000070301	I	1586	TTTGGGCCTGGCTGTGGGTGTGGTCTTCTCCATGATGACTGTGGTCTGCC	12	+	56304597-56304646	12q13.3b-q14.1a	Homo sapiens solute carrier family 26, member 10 (SLC26A10), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Homo sapiens	RefSeq	XM_931962.1	ILMN_46538	LOC643986	XM_931962.1	XM_931962.1		643986	89060214	XM_931962.1	LOC643986	XP_937055.1	ILMN_1806745	0005270615	S	1	ATGATCGGCCCCGTCACGGAACCCAGGCTGCCGGGGGCGAGGGAAAACAG	X	+	129071689-129071738	Xq25h	PREDICTED: Homo sapiens hypothetical LOC643986 (LOC643986), mRNA.					
Homo sapiens	RefSeq	NM_001122.2	ILMN_30009	PLIN2	NM_001122.2	NM_001122.2		123	34577058	NM_001122.2	PLIN2	NP_001113.2	ILMN_1801077	0001400446	S	1429	ACCAAGGTGCAGAGATGGACAAGAGCAGCCAGGAGACCCAGCGATCTGAG	9	-	19116469-19116518	9p22.1b	Homo sapiens perilipin 2 (PLIN2), mRNA.				ADRP; MGC10598	ADRP; MGC10598
Homo sapiens	Unigene	Hs.213122	ILMN_82351	HS.213122	Hs.213122		Hs.213122		5659688	AI923724			ILMN_1830483	0000360438	S	321	GAGACCCCAGTGGAGATGGCAGGGAGACGGAGAAACAGAAACGGAGGTCA	1	+	154943062-154943111		wn76a01.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2451720 3, mRNA sequence					
Homo sapiens	RefSeq	NM_018057.4	ILMN_13394	SLC6A15	NM_018057.4	NM_018057.4		55117	60223401	NM_018057.4	SLC6A15	NP_060527.2	ILMN_2291083	0006590242	I	3533	CCTTTGGGCTAGGTAGGCACATATCAGTTGGACCACATCTGCAATACTGG	12	-	83799403-83799452	12q21.31d-q21.31e	Homo sapiens solute carrier family 6 (neutral amino acid transporter), member 15 (SLC6A15), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [pmid 11112352] [evidence NAS]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	FLJ10316; NTT73; V7-3; DKFZp761I0921; hv7-3; MGC87066	FLJ10316; NTT73; V7-3; DKFZp761I0921; hv7-3; MGC87066
Homo sapiens	RefSeq	NR_030316.1	ILMN_388038	MIR588	NR_030316.1	NR_030316.1		693173	262205921	NR_030316.1	MIR588		ILMN_3309314	0002640215	S	18	GCCACAATGGGTTAGAACACTATTCCATTGTGTTCTTACCCACCATGGCC				6q22.32b	Homo sapiens microRNA 588 (MIR588), microRNA.					
Homo sapiens	RefSeq	NM_002925.3	ILMN_27389	RGS10	NM_001005339.1	NM_001005339.1		6001	52694754	NM_001005339.1	RGS10	NP_001005339.1	ILMN_1733538	0003830092	A	595	GCTTCCAGAATTTATAACACATGAGCCCCCAAAAAGCCGGGACTGGCAGC	10	-	121275543-121275592	10q26.11d	Homo sapiens regulator of G-protein signaling 10 (RGS10), transcript variant 1, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_001005339.1	ILMN_27389	RGS10	NM_001005339.1	NM_001005339.1		6001	52694754	NM_001005339.1	RGS10	NP_001005339.1	ILMN_1668559	0001440209	I	72	GATGTTCAACCGCGCCGTGAGCCGGCTGAGCAGGAAGCGGCCGCCGTCAG	10	-	121292212-121292212:121302102-121302150	10q26.11d	Homo sapiens regulator of G-protein signaling 10 (RGS10), transcript variant 1, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_152719.1	ILMN_1298	SPERT	NM_152719.1	NM_152719.1		220082	22749424	NM_152719.1	SPERT	NP_689932.1	ILMN_2161222	0006060128	S	1459	GGGACACCGAACACTGGGCAAAAGAGAATCCCCTGCCTTCCCTTGTCGTC	13	+	45186540-45186589	13q14.12b	Homo sapiens spermatid associated (SPERT), mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 12204287] [evidence ISS]			FLJ35810; NURIT; CBY2	FLJ35810; NURIT; CBY2
Homo sapiens	RefSeq	NM_001080522.1	ILMN_162070	CC2D2A	NM_001080522.1	NM_001080522.1		57545	122937493	NM_001080522.1	CC2D2A	NP_001073991.1	ILMN_2406586	0006900739	A	4430	GGCCACGCCATCTGACTCGGTGGAATAGGTATTGTACCTCTACTCTGCGT	4	+	15210288-15210337	4p15.33a	Homo sapiens coiled-coil and C2 domain containing 2A (CC2D2A), mRNA.				KIAA1345	KIAA1345
Homo sapiens	RefSeq	NM_015948.2	ILMN_20545	SLC35B3	NM_015948.2	NM_015948.2		51000	21361502	NM_015948.2	SLC35B3	NP_057032.2	ILMN_1682910	0006220630	S	1706	GCGGTGTCAGCCTTTTCTTCAGAGCATTTGTTTGACTGACTTCCAAAGCA	6	-	8358590-8358639	6p24.3b	Homo sapiens solute carrier family 35, member B3 (SLC35B3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		PAPST2; C6orf196; CGI-19	PAPST2; C6orf196; CGI-19
Homo sapiens	RefSeq	NM_020782.1	ILMN_174169	KLHDC5	NM_020782.1	NM_020782.1		57542	55749725	NM_020782.1	KLHDC5	NP_065833.1	ILMN_1727134	0004490273	S	6055	GAAGAGCAAAGGGTGCTGAAATGACTTGTACGGTTGGCTGGTGCTTTCTC	12	+	27846826-27846875	12p11.22b	Homo sapiens kelch domain containing 5 (KLHDC5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC131714; KIAA1340	MGC131714; KIAA1340
Homo sapiens	Unigene	Hs.436134	ILMN_91607	HS.436134	Hs.436134		Hs.436134		4086956	AI349750			ILMN_1900270	0001450504	S	104	GTCTACTCTGACTCGACTGCTATAACTTTGGAGCAAGCTGCAGCACCCAA	11	-	127832362-127832411		ta96c03.x1 NCI_CGAP_Lu26 Homo sapiens cDNA clone IMAGE:2051908 3, mRNA sequence					
Homo sapiens	RefSeq	XM_936338.1	ILMN_45714	LOC642181	XM_936338.1	XM_936338.1		642181	89033693	XM_936338.1	LOC642181	XP_941431.1	ILMN_1660674	0004070414	S	297	CATTGGGGAAATGCCGCTAGCAGGACTGTACGAGGAAATCATGGAGGCCG					PREDICTED: Homo sapiens similar to scavenger receptor protein family member (LOC642181), mRNA.					
Homo sapiens	RefSeq	XM_212238.5	ILMN_37190	DKFZP434M131	XM_212238.5	XM_212238.5		441452	89029876	XM_212238.5	DKFZp434M131	XP_212238.4	ILMN_1715907	0000620451	A	187	CTCCGTTGTGACAACCCACCCTCACCATCGCCTAGGAAGAGAAAGCTTGT	9	+	89722870-89722914:89724651-89724655	9q22.1a	PREDICTED: Homo sapiens hypothetical LOC441452 (DKFZp434M131), mRNA.					
Homo sapiens	RefSeq	NM_015964.2	ILMN_754	TPPP3	NM_015964.2	NM_015964.2		51673	56676376	NM_015964.2	TPPP3	NP_057048.2	ILMN_1797744	0006770762	A	902	AGTCTGTGCCTGTAGCCTCATGACCCCAACCCAGCCCCAGGCATGGCTAA	16	-	67423801-67423850	16q22.1b	Homo sapiens tubulin polymerization-promoting protein family member 3 (TPPP3), mRNA.				p20; CGI-38; p25gamma	p20; CGI-38; p25gamma
Homo sapiens	RefSeq	NM_002960.1	ILMN_19000	S100A3	NM_002960.1	NM_002960.1		6274	4506762	NM_002960.1	S100A3	NP_002951.1	ILMN_1712545	0000150100	S	672	GCAGAGCGTGCACCAATGAGACCACGATGGGAAAGGGCCTATTTAACTCC	1	-	153519825-153519874	1q21.3c	Homo sapiens S100 calcium binding protein A3 (S100A3), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	S100E	S100E
Homo sapiens	RefSeq	NM_002978.2	ILMN_8248	SCNN1D	NM_002978.2	NM_002978.2		6339	34101281	NM_002978.2	SCNN1D	NP_002969.2	ILMN_1754757	0000150059	S	2444	CAAGGCAGGCCCCACGGACACACTTGGGCTGCTCTGAAATAAAGCTGTTG	1	+	1217213-1217262	1p36.33a	Homo sapiens sodium channel, nonvoltage-gated 1, delta (SCNN1D), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 7499195] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 15280] [pmid 7499195] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SCNED; ENaCdelta; MGC149710; dNaCh; ENaCd; MGC149711	SCNED; ENaCdelta; MGC149710; dNaCh; ENaCd; MGC149711
Homo sapiens	Unigene	Hs.562585	ILMN_115652	HS.562585	Hs.562585		Hs.562585		18973733	BM666211			ILMN_1825848	0002120414	S	19	GAGATGGAGTCTCGTTATGTTGCCCCTGCACCTAGCCAATGATCTTTTAA	15	+	75295149-75295198		UI-E-DX1-agu-g-13-0-UI.s1 UI-E-DX1 Homo sapiens cDNA clone UI-E-DX1-agu-g-13-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_927448.1	ILMN_163330	LOC728493	XM_001127751.1	XM_001127751.1		728493	113429993	XM_001127751.1	LOC728493	XP_001127751.1	ILMN_1724865	0001440202	S	276	TGTAGGAGCAGAAGTCCTCAGGGAAATCGAAGATGAGTGGCTTTACAGCA	X	-	103103273-103103322	Xq22.2b	PREDICTED: Homo sapiens similar to stella (LOC728493), mRNA.					
Homo sapiens	RefSeq	XM_001724346.1	ILMN_338010	LOC100131426	XM_001724346.1	XM_001724346.1		100131426	169165183	XM_001724346.1	LOC100131426	XP_001724398.1	ILMN_3202832	0003460603	A	10	TTTTCAGAAAACTCAGAGGTCCTGATAAGGCAGTGAGCCAGACCCCAGGG	3	+	130284028-130284030:130292024-130292070	3q21.3c	PREDICTED: Homo sapiens hypothetical protein LOC100131426 (LOC100131426), mRNA.					
Homo sapiens	RefSeq	XM_001724346.1	ILMN_338010	LOC100131426	XM_001724346.1	XM_001724346.1		100131426	169165183	XM_001724346.1	LOC100131426	XP_001724398.1	ILMN_3279320	0007200026	M	273	GCAAACCCATGAGAGGAAACGGTCAGAGCCAGCAGGCATGGGACAGGGAG	3	+	130292284-130292333	3q21.3c	PREDICTED: Homo sapiens hypothetical protein LOC100131426 (LOC100131426), mRNA.					
Homo sapiens	RefSeq	XM_927170.1	ILMN_33306	LOC643905	XM_927170.1	XM_927170.1		643905	88954202	XM_927170.1	LOC643905	XP_932263.1	ILMN_1704043	0000670341	S	1021	TCCAAGTCTCTTCATCTACGCCTCTTCAGCCACAGCTCTTGCCTGGTGGG	2	-	240630002-240630051	2q37.3e	PREDICTED: Homo sapiens similar to protocadherin 15b (LOC643905), mRNA.					
Homo sapiens	Unigene	Hs.522635	ILMN_100156	HS.522635	Hs.522635		Hs.522635		12612880	BG119374			ILMN_1824016	0002190088	S	234	CCTGGGCTTTGCGGACTTGATTGTTTCCATCTAGGCTTTTGACCTGTGTC	X	-	48250223-48250272		602349056F1 NIH_MGC_90 Homo sapiens cDNA clone IMAGE:4444260 5, mRNA sequence					
Homo sapiens	RefSeq	NM_172025.1	ILMN_171996	ABCC13	NR_003087.1	NR_003087.1		150000	108773779	NR_003087.1	ABCC13		ILMN_1709092	0003990441	A	200	TCCCACCGTGCTGGCGCTGAACTGACTGTCCGCTGCCAAGGGAAGTGACA	21	+	14568190-14568239	21q11.2c	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 13 (ABCC13), transcript variant A, non-coding RNA. XR_017987 XR_017988 XR_017989	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	PRED6; C21orf73	PRED6; C21orf73
Homo sapiens	RefSeq	NM_016003.3	ILMN_28022	WIPI2	NM_016003.3	NM_016003.3		26100	75677338	NM_016003.3	WIPI2	NP_057087.2	ILMN_2321292	0001410075	A	4181	GGAACCTGGAGTCAAAAAGAACTGCTTCAGTCCCCGCTGTACCGCCTGCC	7	+	5239468-5239517	7p22.1c	Homo sapiens WD repeat domain, phosphoinositide interacting 2 (WIPI2), transcript variant 2, mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11256614] [evidence IDA]			FLJ12979; FLJ14217; DKFZP434J154; DKFZp686P02188; Atg21; WIPI-2; CGI-50; FLJ42984	FLJ12979; FLJ14217; DKFZP434J154; DKFZp686P02188; Atg21; WIPI-2; CGI-50; FLJ42984
Homo sapiens	RefSeq	NM_001042635.1	ILMN_181955	NGDN	NM_001042635.1	NM_001042635.1		25983	111038127	NM_001042635.1	NGDN	NP_001036100.1	ILMN_2324998	0005910138	A	754	GAGAGCATGATGGTGCGTTTGAGCGTCAGTAAGCGAGAGAAAGGACGGCG	14	+	23016262-23016311	14q11.2g	Homo sapiens neuroguidin, EIF4E binding protein (NGDN), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]		LCP5; C14orf120; lpd-2; NGD; DKFZP564O092	C14orf120; NGD; LCP5; lpd-2; DKFZP564O092
Homo sapiens	RefSeq	NM_005147.3	ILMN_10747	DNAJA3	NM_005147.3	NM_005147.3		9093	40786390	NM_005147.3	DNAJA3	NP_005138.2	ILMN_1662334	0006560445	S	2470	GCCTCTGCTGGTAGCATGTCGCAGTTTCCATGTGTTTCAGGATCTTCGGG	16	+	4446560-4446609	16p13.3b	Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 3 (DNAJA3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 11719219] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9683573] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 12879007] [evidence NAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9683573] [evidence TAS]	TID1; FLJ45758; hTid-1	TID1; FLJ45758; hTid-1
Homo sapiens	RefSeq	NM_003005.2	ILMN_183130	SELP	NM_003005.2	NM_003005.2		6403	6031196	NM_003005.2	SELP	NP_002996.1	ILMN_1715417	0004810468	S	3060	TGGATGGCACCAGAGGCTGCAGAAGGCCAAGAATCAAGCTAGAAGGCCAC	1	-	167824803-167824852	1q24.2b	Homo sapiens selectin P (granule membrane protein 140kDa, antigen CD62) (SELP), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9290466] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 15297306] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1701178] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1701178] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1377048] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1701178] [evidence TAS]; The lipid bilayer surrounding the platelet alpha granule [goid 31092] [pmid 1377048] [evidence EXP]; The lipid bilayer surrounding the platelet alpha granule [goid 31092] [pmid 15297306] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IEA]; Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels mediated primarily by selectins and which are typically the first step in cellular extravasation [goid 50901] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IEA]; Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels mediated primarily by selectins and which are typically the first step in cellular extravasation [goid 50901] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2466574] [evidence TAS]	Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with sialic acid, any of a variety of N- or O- substituted derivatives of neuraminic acid, a nine carbon monosaccharide. Sialic acids often occur in polysaccharides, glycoproteins, and glycolipids in animals and bacteria [goid 33691] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with sialic acid, any of a variety of N- or O- substituted derivatives of neuraminic acid, a nine carbon monosaccharide. Sialic acids often occur in polysaccharides, glycoproteins, and glycolipids in animals and bacteria [goid 33691] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11237770] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9129046] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15633604] [evidence IPI]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	PSEL; CD62P; CD62; GRMP; GMP140; FLJ45155; PADGEM	CD62P; PSEL; CD62; GRMP; GMP140; FLJ45155; PADGEM
Homo sapiens	RefSeq	NM_014966.2	ILMN_18810	DHX30	NM_138615.1	NM_138615.1		22907	20336293	NM_138615.1	DHX30	NP_619520.1	ILMN_1795218	0001340193	A	3393	GCTGACGTATTTCATGGCAGTCAAGTCCAATGGCAGCGTCTTCGTCCGGG	3	+	47866151-47866200	3p21.31f	Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 30 (DHX30), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0890; FLJ11214; Ret-CoR; DDX30	KIAA0890; FLJ11214; Ret-CoR; DDX30
Homo sapiens	RefSeq	NM_020954.2	ILMN_176692	KIAA1618	NM_020954.2	NM_020954.2		57714	66529202	NM_020954.2	KIAA1618	NP_066005.2	ILMN_2289093	0007400743	I	5246	CCCCGTTTATCCATGTGTCCATTGACGGCCATCTATGTTGCTTCTTCGGC	17	+	75909786-75909835	17q25.3e	Homo sapiens KIAA1618 (KIAA1618), mRNA.					
Homo sapiens	Unigene	Hs.560344	ILMN_114183	HS.560344	Hs.560344		Hs.560344		45366988	CK905457			ILMN_1821127	0007550600	S	224	TCCAGCAAACGAAAAGCTGATTTGGTGCAACGACTTGGAATGCCCCCAGG	15	+	57179666-57179715		ih21b02.y5 Human insulinoma Homo sapiens cDNA clone IMAGE:5614779 5, mRNA sequence					
Homo sapiens	RefSeq	NM_173626.1	ILMN_167531	SLC26A11	XM_001132495.1	XM_001132495.1		284129	113427636	XM_001132495.1	SLC26A11	XP_001132495.1	ILMN_1739751	0007040647	A	1777	CACCCTGTCCACTTGGGTGATCATTCCAGACCCCTCCCCAAACATGCATA				17q25.3d-q25.3e	PREDICTED: Homo sapiens solute carrier family 26, member 11 (SLC26A11), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12626430] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12626430] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12626430] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12626430] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [pmid 12626430] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [pmid 12626430] [evidence IDA];  [goid 15380] [evidence IEA]		MGC46523
Homo sapiens	RefSeq	NM_017881.1	ILMN_28428	C9ORF95	NM_017881.1	NM_017881.1		54981	8923529	NM_017881.1	C9orf95	NP_060351.1	ILMN_1674650	0001980180	S	1013	CTCCCTCTCCAGGGAGCGCATAGATACAGCAGAGCTCACAGTGAGTCAGA	9	-	76866031-76866080	9q21.13b	Homo sapiens chromosome 9 open reading frame 95 (C9orf95), mRNA.				NRK1; bA235O14.2; RP11-235O14.2; FLJ20559	NRK1; bA235O14.2; RP11-235O14.2; FLJ20559
Homo sapiens	RefSeq	NM_001007094.1	ILMN_24916	ZNF37A	NM_001007094.1	NM_001007094.1		7587	55769567	NM_001007094.1	ZNF37A	NP_001007095.1	ILMN_1707596	0001500463	I	492	CAAGGCCGAAGGAGCAGACAGCACCGCTTCTTGGGGAGTTGTGAAGGCAT	10	+	38384339-38384388	10p11.21a	Homo sapiens zinc finger protein 37A (ZNF37A), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8464732] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8464732] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8464732] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX21; FLJ3472; ZNF37	KOX21; FLJ3472; ZNF37
Homo sapiens	RefSeq	NM_007148.2	ILMN_22425	RNF112	NM_007148.3	NM_007148.3		7732	117190501	NM_007148.3	RNF112	NP_009079.1	ILMN_1744676	0004540646	S	2813	CCTGTTTAGATGGGGGAGTGCCCATGCCCTCTGTGAAGTGCCCAAATGCG	17	+	19260795-19260844	17p11.2e	Homo sapiens ring finger protein 112 (RNF112), mRNA.			Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8660987] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF112; BFP	BFP; RNF112
Homo sapiens	Unigene	Hs.561644	ILMN_115003	HS.561644	Hs.561644		Hs.561644		21753844	AK094729			ILMN_1893532	0006220121	S	1901	AAAAGCAGGAGGGGAACGTGTGACGGCCACTGCGAGGCTCAGGGAGAATT	6	-	163651172-163651221		Homo sapiens cDNA FLJ37410 fis, clone BRAMY2028593					
Homo sapiens	RefSeq	NR_002174.1	ILMN_13868	CMAH	NR_002174.1	NR_002174.1		8418	54261741	NR_002174.1	CMAH		ILMN_2086612	0004250634	S	1578	CACCCAACTGGAAGTCATTCCTGATGTGCTGTGAGCAGAATGGGCCTGCG	6	-	25192695-25192744	6p22.2b-p22.2a	Homo sapiens cytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminate monooxygenase) (CMAH) on chromosome 6.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7608218] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: CMP-N-acetylneuraminate + NADPH + H+ + O2 = CMP-N-glycoloylneuraminate + NADP+ + H2O [goid 30338] [pmid 9751737] [evidence NAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	CSAH	CSAH
Homo sapiens	RefSeq	NM_177532.3	ILMN_15686	RASSF6	NM_177532.3	NM_177532.3		166824	41393612	NM_177532.3	RASSF6	NP_803876.1	ILMN_2352245	0000630240	A	3967	AAGATGAAAGAGGGAAATAGGCCATGGACGGTGGCTCACGCCTGTAATCC	4	-	74657977-74658026	4q13.3d	Homo sapiens Ras association (RalGDS/AF-6) domain family member 6 (RASSF6), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp686K23225	DKFZp686K23225
Homo sapiens	RefSeq	NM_177532.3	ILMN_15686	RASSF6	NM_177532.3	NM_177532.3		166824	41393612	NM_177532.3	RASSF6	NP_803876.1	ILMN_1657381	0002370370	I	17	GGCACTGGTTTCCCTCTACCAGAGTTCCTGACCCAGCCGAGAACAAACCG	4	-	74704932-74704981	4q13.3d	Homo sapiens Ras association (RalGDS/AF-6) domain family member 6 (RASSF6), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp686K23225	DKFZp686K23225
Homo sapiens	RefSeq	NM_212467.1	ILMN_9400	CAPN3	NM_212467.1	NM_212467.1		825	47078248	NM_212467.1	CAPN3	NP_997632.1	ILMN_2296803	0002940703	I	839	GCAGTTGGAGGAACTGCCTGCAGCCTTGAGGAAAATGTCTAGTCACAAGG	15	+	40465397-40465446	15q15.1d	Homo sapiens calpain 3, (p94) (CAPN3), transcript variant 9, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 7720071] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9642272] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9642272] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 7720071] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [pmid 9642272] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 7720071] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	CANP3; MGC14344; p94; LGMD2; MGC10767; CANPL3; MGC11121; MGC4403; LGMD2A; nCL-1	CANP3; MGC14344; p94; LGMD2; MGC10767; CANPL3; MGC11121; MGC4403; LGMD2A; nCL-1
Homo sapiens	RefSeq	NM_001007022.1	ILMN_11030	ODF2L	NM_001007022.1	NM_001007022.1		57489	55749707	NM_001007022.1	ODF2L	NP_001007023.1	ILMN_2325028	0000730315	A	1835	GCAGAGTATACAGCATTGGCCAGACAACTGGAAGCTGCTTTAGAAGAAGG	1	-	86820222-86820271	1p22.3c	Homo sapiens outer dense fiber of sperm tails 2-like (ODF2L), transcript variant 2, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC111060; RP5-977L11.1; KIAA1229; dJ977L11.1	MGC111060; dJ977L11.1; RP5-977L11.1; KIAA1229
Homo sapiens	RefSeq	NM_001007022.1	ILMN_11030	ODF2L	NM_001007022.1	NM_001007022.1		57489	55749707	NM_001007022.1	ODF2L	NP_001007023.1	ILMN_1702073	0006840026	A	1605	GTGCAGACCAGGAACACACCATTAGGGAGCTTCAGGGCCAGGTTGATGGA	1	-	86820533-86820542:86822127-86822166	1p22.3c	Homo sapiens outer dense fiber of sperm tails 2-like (ODF2L), transcript variant 2, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC111060; RP5-977L11.1; KIAA1229; dJ977L11.1	MGC111060; dJ977L11.1; RP5-977L11.1; KIAA1229
Homo sapiens	RefSeq	NM_181756.1	ILMN_2319	ZNF233	NM_181756.1	NM_181756.1		353355	32308168	NM_181756.1	ZNF233	NP_861421.1	ILMN_1711357	0000160176	S	2562	CTGCTGCATGATCGTGACCTTGAACAAGTACCTAAGAAATAGTGGCTTCC	19	+	44779248-44779297	19q13.31b	Homo sapiens zinc finger protein 233 (ZNF233), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ38032	FLJ38032
Homo sapiens	RefSeq	NM_001001723.1	ILMN_9846	TMEM1	NM_001001723.1	NM_001001723.1		7109	48928030	NM_001001723.1	TMEM1	NP_001001723.1	ILMN_1779632	0005810332	A	781	CATGAGAACCTTGAGGGAGAAGAGGACTGAGCCAGGCTGGAGCTTTTGTG	21	+	44300136-44300185	21q22.3d	Homo sapiens transmembrane protein 1 (TMEM1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			EHOC-1; MGC126777; EHOC1; GT334	EHOC-1; MGC126777; EHOC1; GT334
Homo sapiens	RefSeq	NM_001001723.1	ILMN_9846	TMEM1	NM_001001723.1	NM_001001723.1		7109	48928030	NM_001001723.1	TMEM1	NP_001001723.1	ILMN_1717973	0005910082	I	1525	TGGTGTCAGCAGGAGAACCTGGAGGGAGATGAAGTGTGGGGACGGTCAGT	21	+	44304339-44304388	21q22.3d	Homo sapiens transmembrane protein 1 (TMEM1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			EHOC-1; MGC126777; EHOC1; GT334	EHOC-1; MGC126777; EHOC1; GT334
Homo sapiens	RefSeq	NM_014815.3	ILMN_168341	MED24	NM_014815.3	NM_014815.3		9862	119220576	NM_014815.3	MED24	NP_055630.2	ILMN_2388272	0001980382	A	3482	CCATCTGCTGGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGT	17	-	38175533-38175582	17q21.1a-q21.1b	Homo sapiens mediator complex subunit 24 (MED24), transcript variant 1, mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 9653119] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10235267] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 12218053] [evidence IDA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 12218053] [evidence IDA]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 12218053] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 12218053] [evidence IDA]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 10198638] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10198638] [evidence IDA];  [goid 30374] [pmid 10235266] [evidence NAS]; Interacting selectively with the vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes [goid 42809] [pmid 10235266] [evidence NAS]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 10198638] [evidence IDA]	THRAP4; CRSP100; DRIP100; CRSP4; TRAP100; MED24; ARC100; MGC8748; KIAA0130	THRAP4; CRSP100; DRIP100; CRSP4; TRAP100; MED24; ARC100; MGC8748; KIAA0130
Homo sapiens	RefSeq	NM_014815.2	ILMN_168341	MED24	NM_014815.3	NM_014815.3		9862	119220576	NM_014815.3	MED24	NP_055630.2	ILMN_1711853	0007400411	S	3402	CCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGT	17	-	38175613-38175662	17q21.1a-q21.1b	Homo sapiens mediator complex subunit 24 (MED24), transcript variant 1, mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 9653119] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10235267] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 12218053] [evidence IDA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 12218053] [evidence IDA]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 12218053] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 12218053] [evidence IDA]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 10198638] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10198638] [evidence IDA];  [goid 30374] [pmid 10235266] [evidence NAS]; Interacting selectively with the vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes [goid 42809] [pmid 10235266] [evidence NAS]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 10198638] [evidence IDA]	THRAP4; CRSP100; DRIP100; CRSP4; TRAP100; MED24; ARC100; MGC8748; KIAA0130	DRIP100; TRAP100; MED24; KIAA0130
Homo sapiens	RefSeq	NM_001013439.1	ILMN_17059	FXR1	NM_001013439.1	NM_001013439.1		8087	61835171	NM_001013439.1	FXR1	NP_001013457.1	ILMN_1704335	0003520048	I	225	AGGTTGGAAAGGACACTAGCCACCTGTGTGTGCACTGAAATCATGTACGC	3	+	180632591-180632640	3q26.33b	Homo sapiens fragile X mental retardation, autosomal homolog 1 (FXR1), transcript variant 3, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10888599] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7781595] [evidence TAS]; Several ribosomes bound to one mRNA [goid 5844] [pmid 9817930] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9642279] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7781595] [evidence TAS]		
Homo sapiens	RefSeq	NM_058203.1	ILMN_14662	SPAG11B	NM_058203.1	NM_058203.1		10407	17402930	NM_058203.1	SPAG11B	NP_478110.1	ILMN_1655330	0004560113	I	384	CCTGCATCAGATTTAAAAGTTGTTGACTGCAGGAGAAGTGAAGGCTTCTG	8	-	7319004-7319053	8p23.1e	Homo sapiens sperm associated antigen 11B (SPAG11B), transcript variant C, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10698202] [evidence NAS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8167223] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC61846; EP2C; EP2; HE2C; EP2D; SPAG11; SPAG11B; HE2	MGC61846; EP2C; EP2; HE2C; EP2D; SPAG11; SPAG11B; HE2
Homo sapiens	RefSeq	XR_039512.1	ILMN_341824	LOC730232	XR_039512.1	XR_039512.1		730232	169162366	XR_039512.1	LOC730232		ILMN_3301103	0001260392	M	981	TTGGCATTGTCCCTTTGGGGCTAGTGGAGACTGCTATTCTCAAACCCAGC				1q31.3c	PREDICTED: Homo sapiens misc_RNA (LOC730232), miscRNA.					
Homo sapiens	RefSeq	NM_005907.2	ILMN_1394	MAN1A1	NM_005907.2	NM_005907.2		4121	24497518	NM_005907.2	MAN1A1	NP_005898.2	ILMN_1742187	0000630014	S	3827	TTCAGCCGAGAATGGTCAGAAAGATCAGTACAACCCCATGGATTAGGCTG	6	-	119542644-119542682:119542683-119542693	6q22.31a	Homo sapiens mannosidase, alpha, class 1A, member 1 (MAN1A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8223597] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8223597] [evidence TAS]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [pmid 8223597] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8223597] [evidence TAS]; Catalysis of the hydrolysis of mannosyl compounds, substances containing a group derived from a cyclic form of mannose or a mannose derivative [goid 15923] [pmid 8223597] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	MAN9; HUMM3; HUMM9	MAN9; HUMM3; HUMM9
Homo sapiens	RefSeq	NM_001001503.1	ILMN_17959	NDUFV3	NM_001001503.1	NM_001001503.1		4731	48255925	NM_001001503.1	NDUFV3	NP_001001503.1	ILMN_2387731	0003610332	A	799	CCACTGCGCCCGGCCACTTTCACACTTTTTACAGTGAGTGGTGAATTAGC	21	+	43202606-43202655	21q22.3b	Homo sapiens NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa (NDUFV3), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	CI-9KD	CI-9KD
Homo sapiens	RefSeq	NM_000904.1	ILMN_26249	NQO2	NM_000904.2	NM_000904.2		4835	141802406	NM_000904.2	NQO2	NP_000895.1	ILMN_1712918	0002710682	S	620	CGGGAGGCACGGCCGAGATGTACACGAAGACAGGAGTCAATGGAGATTCT				6p25.2b	Homo sapiens NAD(P)H dehydrogenase, quinone 2 (NQO2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: 1-(beta-D-ribofuranosyl)-1,4-dihydronicotinamide + a quinone = 1-(beta-D-ribofuranosyl)nicotinamide + a hydroquinone [goid 1512] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + acceptor = NADP+ + reduced acceptor [goid 8753] [pmid 1691923] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 1691923] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	DHQV; DIA6; NMOR2; QR2	DHQV; DIA6; NMOR2; QR2
Homo sapiens	RefSeq	XM_937895.1	ILMN_45737	LOC648815	XM_937895.1	XM_937895.1		648815	89065800	XM_937895.1	LOC648815	XP_942988.1	ILMN_1652711	0004150338	S	78	GAAGTGTGTGGGGCCTGCTGGGGAAGACTTACGGGGAGTGGAGATTTTCC					PREDICTED: Homo sapiens similar to hydrocephalus inducing (LOC648815), mRNA.					
Homo sapiens	RefSeq	XM_929614.1	ILMN_32850	LOC644641	XM_929614.1	XM_929614.1		644641	89033782	XM_929614.1	LOC644641	XP_934707.1	ILMN_1704908	0006450358	S	678	TGGAGACATGGGAGGTGAGAAGTTGAGAGAAGCTAAGTGGCATTGAGGAC	11	+	9694354-9694403		PREDICTED: Homo sapiens hypothetical protein LOC644641 (LOC644641), mRNA.					
Homo sapiens	RefSeq	XM_001713928.1	ILMN_346381	LOC100128221	XM_001713928.1	XM_001713928.1		100128221	169162461	XM_001713928.1	LOC100128221	XP_001713980.1	ILMN_3189621	0005360139	A	730	GAGCTCTTGTGAGGGAGGCACCGAATTATCAGGCAGCTCAAGAGATAGAT				1p36.22b	PREDICTED: Homo sapiens similar to hCG2041787 (LOC100128221), mRNA.					
Homo sapiens	Unigene	Hs.278145	ILMN_84352	HS.278145	Hs.278145		Hs.278145		7375918	AW629128			ILMN_1870940	0004180440	S	344	GTGGCAACTTTGAGAGGTGAGGCCTTTAAGAGGTAATTGGATCATGAGGG	5	+	72106526-72106575		hi51d04.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2975815 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015633.1	ILMN_17139	FGFR1OP2	NM_015633.1	NM_015633.1		26127	24308110	NM_015633.1	FGFR1OP2	NP_056448.1	ILMN_1657436	0001340681	S	2133	AGCTGAAAGTGGGGGTAAAGGTGGAGTAATCTGTGGATTTGTTTCTGTTG	12	+	27009962-27010011	12p11.23b-p11.23a	Homo sapiens FGFR1 oncogene partner 2 (FGFR1OP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			DKFZp564O1863; HSPC123-like	DKFZp564O1863; HSPC123-like
Homo sapiens	RefSeq	NM_033453.2	ILMN_26620	ITPA	NM_033453.2	NM_033453.2		3704	31657145	NM_033453.2	ITPA	NP_258412.1	ILMN_2407482	0000360445	A	572	AGAGGCTGCCAGGACTTTGGCTGGGACCCCTGCTTTCAGCCTGATGGATA	20	+	3150505-3150554	20p13c	Homo sapiens inosine triphosphatase (nucleoside triphosphate pyrophosphatase) (ITPA), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: H2O + a nucleoside triphosphate = pyrophosphate + a nucleotide [goid 47429] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: H2O + a nucleoside triphosphate = pyrophosphate + a nucleotide [goid 47429] [evidence IEA]	dJ794I6.3; ITPase; HLC14-06-P; C20orf37	dJ794I6.3; ITPase; HLC14-06-P; C20orf37
Homo sapiens	RefSeq	NM_181493.1	ILMN_26620	ITPA	NM_033453.2	NM_033453.2		3704	31657145	NM_033453.2	ITPA	NP_258412.1	ILMN_1718334	0006350086	A	995	AAGCTGTACTTGGTGGGAGTGAGGGCGTGGGGAGGAACCATGCAAATCGC	20	+	3152376-3152425	20p13c	Homo sapiens inosine triphosphatase (nucleoside triphosphate pyrophosphatase) (ITPA), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: H2O + a nucleoside triphosphate = pyrophosphate + a nucleotide [goid 47429] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: H2O + a nucleoside triphosphate = pyrophosphate + a nucleotide [goid 47429] [evidence IEA]	dJ794I6.3; ITPase; HLC14-06-P; C20orf37	dJ794I6.3; ITPase; HLC14-06-P; C20orf37
Homo sapiens	Unigene	Hs.543093	ILMN_106758	HS.543093	Hs.543093		Hs.543093		23710363	BU752765			ILMN_1843007	0002810184	S	220	CTTCCACTCCAAAGCATCATCGTGCCTCGCTCCTCGCTGACTGTAACCCC	3	-	72595146-72595195		UI-1-BC0-afw-h-09-0-UI.s1 NCI_CGAP_Pl1 Homo sapiens cDNA clone UI-1-BC0-afw-h-09-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_938146.1	ILMN_45584	LOC649063	XM_938146.1	XM_938146.1		649063	89042735	XM_938146.1	LOC649063	XP_943239.1	ILMN_1708947	0007550746	S	64	TTCCTGACAGTTCAACTTATCAGACTGGCCGCCTTTTTAAATAGAACGCC					PREDICTED: Homo sapiens hypothetical protein LOC649063 (LOC649063), mRNA.					
Homo sapiens	RefSeq	NM_014205.2	ILMN_21707	ZNHIT2	NM_014205.2	NM_014205.2		741	42716303	NM_014205.2	ZNHIT2	NP_055020.1	ILMN_1810392	0005130521	S	997	GGCCGTGCCCGGAAACAGGCCGTGGCTAGAGAAGAGCGAGATCATCTTTA	11	-	64884124-64884173	11q13.1c	Homo sapiens zinc finger, HIT type 2 (ZNHIT2), mRNA.				FON; C11orf5; MGC120285; MGC120286	FON; C11orf5; MGC120285; MGC120286
Homo sapiens	RefSeq	XM_001723077.1	ILMN_339316	LOC100132934	XM_001723077.1	XM_001723077.1		100132934	169164914	XM_001723077.1	LOC100132934	XP_001723129.1	ILMN_3204434	0002120390	A	423	CCGGCTGCCCAAGAAGTGTTCCATGTGTAAATGCTGGCACGGGCAGCTCC				2q36.3c	PREDICTED: Homo sapiens similar to hCG1644233 (LOC100132934), mRNA.					
Homo sapiens	RefSeq	NM_199053.1	ILMN_8900	C4ORF41	NM_021942.4	NM_021942.4		60684	39995075	NM_021942.4	C4orf41	NP_068761.4	ILMN_1752086	0007160196	A	3939	CCTGTGCCATAAAGTTCCGAATCCCCCATGTGTCTCTTTCAGAGCTGGCC	4	+	184634158-184634207	4q35.1c	Homo sapiens chromosome 4 open reading frame 41 (C4orf41), transcript variant 1, mRNA.				FLJ12716	FLJ12716
Homo sapiens	RefSeq	NM_021942.4	ILMN_8900	C4ORF41	NM_021942.4	NM_021942.4		60684	39995075	NM_021942.4	C4orf41	NP_068761.4	ILMN_1666827	0001470519	I	3420	CCTCTGATGGCTGGATACCAGCAGCTGCCATCTCTCAACATCAACTTGCT	4	+	184629614-184629663	4q35.1c	Homo sapiens chromosome 4 open reading frame 41 (C4orf41), transcript variant 1, mRNA.				FLJ12716	FLJ12716
Homo sapiens	RefSeq	XM_939162.1	ILMN_39415	LOC650076	XM_939162.1	XM_939162.1		650076	88970948	XM_939162.1	LOC650076	XP_944255.1	ILMN_1656672	0001660431	S	203	ATGGCACCTACACCTGCCTGGCTGAGAATGCCTTGGGGCAGGTGTCCTGC					PREDICTED: Homo sapiens similar to Myosin light chain kinase, smooth muscle and non-muscle isozymes (MLCK) (LOC650076), mRNA.					
Homo sapiens	RefSeq	NR_023385.1	ILMN_365673	RNF216L	NR_023385.1	NR_023385.1		441191	190194406	NR_023385.1	RNF216L		ILMN_3304974	0006040538	M	559	GGACACTATGCAATCACCCGAAAGGGGTTGGCATCTGCACATCCTTCCTG	7	+	5024683-5024706:5036241-5036266	7p22.1d	Homo sapiens ring finger protein 216-like (RNF216L), transcript variant 3, non-coding RNA.					
Homo sapiens	RefSeq	NM_014710.2	ILMN_306856	GPRASP1	NM_001099411.1	NM_001099411.1		9737	150378527	NM_001099411.1	GPRASP1	NP_001092881.1	ILMN_1787627	0000620273	S	4773	GGAACTGCAAGGCAAAACAGACAATCAAAATGACCCTGAAGGGGACCAAG	X	+	101799628-101799677	Xq22.1e	Homo sapiens G protein-coupled receptor associated sorting protein 1 (GPRASP1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	GASP; KIAA0443; GASP1	KIAA0443; GASP1; GASP
Homo sapiens	RefSeq	XR_041830.1	ILMN_352374	C20ORF56	XR_041830.1	XR_041830.1		140828	169214930	XR_041830.1	C20orf56		ILMN_3196687	0000240735	A	17274	CATAGATTTGCACTGTTGGGTGTGTGTTCCGAATCAGTGGGTTTTCCCAC				20p11.21c	PREDICTED: Homo sapiens misc_RNA (C20orf56), miscRNA.					
Homo sapiens	RefSeq	XR_041830.1	ILMN_352374	C20ORF56	XR_041830.1	XR_041830.1		140828	169214930	XR_041830.1	C20orf56		ILMN_3273154	0002260114	M	17608	GCTAAAGGTCTCCCACTGAGACGCTGTTCTGCAAGGAGCCGACCTCACGT				20p11.21c	PREDICTED: Homo sapiens misc_RNA (C20orf56), miscRNA.					
Homo sapiens	RefSeq	NM_003417.2	ILMN_162141	ZNF264	NM_003417.3	NM_003417.3		9422	108860682	NM_003417.3	ZNF264	NP_003408.1	ILMN_1795435	0004850270	S	8269	CTATCTGGGGGAATAGAAAGCCCACAGTCTTCTGAGTTGTGCTACACCAA	19	+	57730321-57730370	19q13.43b	Homo sapiens zinc finger protein 264 (ZNF264), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_941371.1	ILMN_172798	LOC642846	XR_017754.1	XR_017754.1		642846	113423245	XR_017754.1	LOC642846		ILMN_1740282	0006550100	S	4304	CTCCTACCCTTGCGTCTCAGGACCAGCTTGTTGAAGAGATCCCACATCAG	12	+	9358524-9358573	12p13.31a	PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like (LOC642846), misc RNA.					
Homo sapiens	RefSeq	NM_017586.1	ILMN_19247	C9ORF7	NM_017586.1	NM_017586.1		11094	8922115	NM_017586.1	C9orf7	NP_060056.1	ILMN_1814856	0001990477	S	2348	TGGATCAAGGAAGGCTGCCCCTGTACCCTGTGGGGAAATGGTGGGTGCAT	9	+	135325367-135325416	9q34.2a	Homo sapiens chromosome 9 open reading frame 7 (C9orf7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	D9S2135	D9S2135
Homo sapiens	RefSeq	NM_015302.1	ILMN_308087	HAUS5	NM_015302.1	NM_015302.1		23354	149944679	NM_015302.1	HAUS5	NP_056117.1	ILMN_3247504	0000450170	S	3755	GCTGGCCCCAGAAGAAAAACATGCACAGATGGTAGTTTTACTGGTGTTGC	19	+	36115697-36115746	19q13.12a	Homo sapiens HAUS augmin-like complex, subunit 5 (HAUS5), mRNA. XM_945898					
Homo sapiens	RefSeq	NM_012089.1	ILMN_4642	ABCB10	NM_012089.1	NM_012089.1		23456	9961243	NM_012089.1	ABCB10	NP_036221.1	ILMN_1665730	0004810048	S	3386	GCTGTTGCCTCAAGAAAAAGTGCTTTTTCTCCATGGATGAGGCTAGACCC	1	-	227719373-227719422	1q42.13e	Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 10 (ABCB10), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 10748049] [evidence NAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 10748049] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10748049] [evidence NAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	EST20237; M-ABC2; MTABC2	EST20237; M-ABC2; MTABC2
Homo sapiens	RefSeq	XM_946112.1	ILMN_43449	LOC652860	XM_946112.1	XM_946112.1		652860	89060633	XM_946112.1	LOC652860	XP_951205.1	ILMN_1673126	0001240100	S	505	GAGGCAGCCAATCACAAAGAGGCGCTGAGGTCACGTCCGAGAGAGACGCT					PREDICTED: Homo sapiens hypothetical protein LOC652860 (LOC652860), mRNA.					
Homo sapiens	RefSeq	NM_001012511.1	ILMN_4126	GOSR2	NM_001012511.1	NM_001012511.1		9570	60499012	NM_001012511.1	GOSR2	NP_001012529.1	ILMN_1807072	0001050403	I	1706	GAGCGTCCTGTTAAGGCACATGCTAACTTCCCACTCAAGTCTGGCAGCGC	17	+	42368690-42368739	17q21.32a	Homo sapiens golgi SNAP receptor complex member 2 (GOSR2), transcript variant C, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 9349823] [evidence TAS]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 9349823] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9349823] [evidence TAS]	GS27; MEMBRIN; Bos1	GS27; MEMBRIN; Bos1
Homo sapiens	Unigene	Hs.445343	ILMN_92978	HS.445343	Hs.445343		Hs.445343		11593900	BF510602			ILMN_1846451	0006760601	S	380	TCACACTTGCCGACATGAGAGCGGAACCTTTGAGGCCGACTCCACCCTAG	4	-	4300930-4300979		UI-H-BI4-apk-d-03-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3087772 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004615.2	ILMN_20684	TSPAN7	NM_004615.2	NM_004615.2		7102	21265103	NM_004615.2	TSPAN7	NP_004606.2	ILMN_1809291	0003840767	S	1179	GGGCCCTGCATGTAGTGTGGGAGGCTCCTGTTAGCTCCTCACTGTGGTAA	X	+	38432497-38432546	Xp11.4e	Homo sapiens tetraspanin 7 (TSPAN7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10617319] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8420826] [evidence TAS]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 8420826] [evidence TAS]		TM4SF2; MRX58; TM4SF2b; MXS1; DXS1692E; CD231; CCG-B7; TALLA-1; A15	TM4SF2; MRX58; MXS1; DXS1692E; CD231; CCG-B7; TALLA-1; A15; TM4SF2b
Homo sapiens	RefSeq	NM_004615.2	ILMN_20684	TSPAN7	NM_004615.2	NM_004615.2		7102	21265103	NM_004615.2	TSPAN7	NP_004606.2	ILMN_2120695	0000460010	S	1406	GAAGGAAACTGAACTTGAGGTGGCCTCCTTGCTTGTTACATACCTGGGTA	X	+	38432724-38432773	Xp11.4e	Homo sapiens tetraspanin 7 (TSPAN7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10617319] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8420826] [evidence TAS]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 8420826] [evidence TAS]		TM4SF2; MRX58; TM4SF2b; MXS1; DXS1692E; CD231; CCG-B7; TALLA-1; A15	TM4SF2; MRX58; MXS1; DXS1692E; CD231; CCG-B7; TALLA-1; A15; TM4SF2b
Homo sapiens	RefSeq	NM_032130.1	ILMN_9541	FAM186B	NM_032130.1	NM_032130.1		84070	14149788	NM_032130.1	FAM186B	NP_115506.1	ILMN_1709367	0006620324	S	2803	CCTGAAGGCCCAGTAAGGTGCGAGGCTGATGGTCAATGTGGATTCTCCCC	12	-	48267578-48267627	12q13.12c	Homo sapiens family with sequence similarity 186, member B (FAM186B), mRNA.				DKFZp434N2350; DKFZP434J0113	DKFZp434N2350; DKFZP434J0113
Homo sapiens	RefSeq	NM_002806.2	ILMN_3800	PSMC6	NM_002806.2	NM_002806.2		5706	24430159	NM_002806.2	PSMC6	NP_002797.2	ILMN_2096759	0004780538	S	1116	GACTTCATGAAAGCAGTCAGAAAAGTGGCTGATTCTAAGAAGCTGGAGTC	14	+	52264011-52264060	14q22.1d	Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6 (PSMC6), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 9464850] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10419517] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9464850] [evidence IC ]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 9464850] [evidence TAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 11590019] [evidence NAS]	CADP44; p42; P44; MGC12520; SUG2	CADP44; p42; P44; MGC12520; SUG2
Homo sapiens	RefSeq	NM_002806.2	ILMN_3800	PSMC6	NM_002806.2	NM_002806.2		5706	24430159	NM_002806.2	PSMC6	NP_002797.2	ILMN_1655316	0006100762	S	852	GCTACAAACAGACCAGATACACTGGATCCTGCTTTGCTGCGTCCAGGAAG	14	+	52257383-52257432	14q22.1d	Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 6 (PSMC6), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 9464850] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10419517] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9464850] [evidence IC ]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 9464850] [evidence TAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 11590019] [evidence NAS]	CADP44; p42; P44; MGC12520; SUG2	CADP44; p42; P44; MGC12520; SUG2
Homo sapiens	RefSeq	NM_018017.2	ILMN_25804	C10ORF118	NM_018017.2	NM_018017.2		55088	36031015	NM_018017.2	C10orf118	NP_060487.2	ILMN_1734010	0007610082	S	5815	GAGGGCCTTCTGCCCTCTGAATATATGGTGAGGAGAATGGGGTATCTGGA	10	-	115884693-115884742	10q25.3a	Homo sapiens chromosome 10 open reading frame 118 (C10orf118), mRNA.				MGC118918; FLJ10188; FLJ35301	MGC118918; FLJ10188; FLJ35301
Homo sapiens	RefSeq	NM_000117.1	ILMN_13626	EMD	NM_000117.1	NM_000117.1		2010	4557552	NM_000117.1	EMD	NP_000108.1	ILMN_1801421	0003140670	S	995	AGGGAGGCAGCAGACTCAGGCCCTCCATGGTCCTCTTTGTCATTTTGTTG	X	+	153262923-153262972	Xq28g	Homo sapiens emerin (Emery-Dreifuss muscular dystrophy) (EMD), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 7894480] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8589715] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 7894480] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15009215] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]	STA; EDMD	STA; EDMD
Homo sapiens	RefSeq	XM_496078.2	ILMN_172117	LOC440292	XM_496078.3	XM_496078.3		440292	113425329	XM_496078.3	LOC440292	XP_496078.3	ILMN_1751969	0006550142	S	863	CAGACACTCACCAGGACAAGGGCAACTGTGACGAGCAGGAGGCCCAGGAT	15	-	76019858-76019907	15q24.3b	PREDICTED: Homo sapiens similar to hCG1731366 (LOC440292), mRNA.					
Homo sapiens	RefSeq	XM_210856.4	ILMN_46264	LOC283029	XM_210856.4	XM_210856.4		283029	89031883	XM_210856.4	LOC283029	XP_210856.3	ILMN_1729306	0007000152	S	1526	AGTGCCTTGGCCTTTAACCTGCAGCGTCCTGGGTCTCTTTGGCCCAGCCA					PREDICTED: Homo sapiens hypothetical LOC283029 (LOC283029), mRNA.					
Homo sapiens	RefSeq	NM_198402.2	ILMN_183743	PTPLB	NM_198402.2	NM_198402.2		201562	42476153	NM_198402.2	PTPLB	NP_940684.1	ILMN_2170353	0006980253	S	4204	ATACTGATCTGTGTTGCATTTCAAAATAAACTGGTGTGTGCTCTGCCTGG	3	-	124693098-124693147	3q21.1b-q21.1c	Homo sapiens protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b (PTPLB), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15024066] [evidence IPI]		
Homo sapiens	RefSeq	NR_030155.1	ILMN_387778	MIR412	NR_030155.1	NR_030155.1		574433	262205113	NR_030155.1	MIR412		ILMN_3308678	0003060653	S	40	TTGTTTCTAATGTACTTCACCTGGTCCACTAGCCGTCCGTATCCGCTGCA				14q32.31a	Homo sapiens microRNA 412 (MIR412), microRNA.					
Homo sapiens	RefSeq	XM_942248.1	ILMN_41350	LOC652671	XM_942248.2	XM_942248.2		652671	113431349	XM_942248.2	LOC652671	XP_947341.1	ILMN_1805201	0006840592	S	1	ATGCAGGATGTCTCCAATACAACGACAGCCCAGAAGAGGAAGTGCAGCCA					PREDICTED: Homo sapiens similar to promyelocytic leukemia protein isoform 9 (LOC652671), mRNA.					
Homo sapiens	RefSeq	NR_015390.1	ILMN_371420	LOC151300	NR_015390.1	NR_015390.1		151300	211971068	NR_015390.1	LOC151300		ILMN_3289895	0001740327	M	519	GAGGGGCTTGACCCTGGATTGGCAGAGGAAAGCAATGGTGGGATCGATAC	2	+	219841524-219841573	2q35f	Homo sapiens hypothetical LOC151300 (LOC151300), transcript variant 2, non-coding RNA.					
Homo sapiens	RefSeq	NM_018842.3	ILMN_16050	BAIAP2L1	NM_018842.3	NM_018842.3		55971	34222363	NM_018842.3	BAIAP2L1	NP_061330.2	ILMN_1703593	0005700343	S	1818	TCTGCCACGTGCTGACGGTCGGGAAGCTTCAGTGGAGAGGCCTAACTCTA	7	-	97760653-97760702	7q21.3d	Homo sapiens BAI1-associated protein 2-like 1 (BAIAP2L1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	IRTKS	IRTKS
Homo sapiens	RefSeq	NM_004000.2	ILMN_1036	CHI3L2	NM_004000.2	NM_004000.2		1117	68533254	NM_004000.2	CHI3L2	NP_003991.2	ILMN_2326273	0000610598	A	1197	CCTTACCCTCTTGTCCAAGCAGTCAAGAGAAGCCTTGGCTCCCTGTGAAG	1	+	111586462-111586509:111586510-111586511	1p13.3a	Homo sapiens chitinase 3-like 2 (CHI3L2), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8702629] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	YKL39; YKL-39	YKL39; YKL-39
Homo sapiens	RefSeq	NM_172238.1	ILMN_9513	TFAP2D	NM_172238.3	NM_172238.3		83741	151301210	NM_172238.3	TFAP2D	NP_758438.2	ILMN_1659378	0000010427	S	1788	GGACATGCCAACTCGGAGAAAGCTCCCCTGCGGAAAACTTCAGAGGCTGC	6	+	50740494-50740543	6p12.3a	Homo sapiens transcription factor AP-2 delta (activating enhancer binding protein 2 delta) (TFAP2D), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	TFAP2BL1	TFAP2BL1
Homo sapiens	RefSeq	NM_005188.2	ILMN_172998	CBL	NM_005188.2	NM_005188.2		867	52426744	NM_005188.2	CBL	NP_005179.2	ILMN_2181968	0006960209	S	10781	GTCCTCCTTATTCAAGATTTTGAAATTCTTAGCCTGGGAGTGCTGGAGAG	11	+	118683623-118683672	11q23.3e	Homo sapiens Cas-Br-M (murine) ecotropic retroviral transforming sequence (CBL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8621719] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14505571] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11823423] [evidence EXP]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16407834] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12593796] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15465819] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11894095] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10567358] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12218189] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15475003] [evidence EXP]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 15465819] [evidence TAS]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 15465819] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 15465819] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport [goid 48260] [pmid 15465819] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2030914] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 16407834] [evidence EXP]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 12593796] [evidence EXP]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 15465819] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 12218189] [evidence EXP]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11891219] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	C-CBL; CBL2; RNF55	C-CBL; CBL2; RNF55
Homo sapiens	Unigene	Hs.21856	ILMN_71721	HS.21856	Hs.21856		Hs.21856		27827627	BX095317			ILMN_1851843	0007160068	S	239	GGTGTAAAACCAGGGGGCACATGCTGCAGAGACTGGCTAAAACCTCACCA	1	-	14390101-14390150		BX095317 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGp998K01153, mRNA sequence					
Homo sapiens	RefSeq	NM_000668.3	ILMN_15844	ADH1B	NM_000668.3	NM_000668.3		125	34577060	NM_000668.3	ADH1B	NP_000659.2	ILMN_1811598	0002490612	S	2535	TACTGTGTGATCTTCAGTAAGTCTCTCAGGCTCTCTGAGCTTGTTCATCC	4	-	100446633-100446682	4q23b	Homo sapiens alcohol dehydrogenase IB (class I), beta polypeptide (ADH1B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	 [goid 6069] [pmid 2398055] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ requiring the presence of zinc [goid 4024] [pmid 9982] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9982] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 2398055] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADH2	ADH2
Homo sapiens	RefSeq	NR_001543.1	ILMN_8832	TTTY14	NR_001543.1	NR_001543.1		83869	32563545	NR_001543.1	TTTY14		ILMN_2143383	0002030592	S	94	AGAGTCAGAGGCCACCCTGAGATGGACCGAGATCTTCAGTTGGGGAGGCG	Y	-	21239159-21239208	Yq11.222a	Homo sapiens testis-specific transcript, Y-linked 14 (non-protein coding) (TTTY14), non-coding RNA.				TTY14	TTY14
Homo sapiens	RefSeq	NM_003664.3	ILMN_4527	AP3B1	NM_003664.3	NM_003664.3		8546	32484978	NM_003664.3	AP3B1	NP_003655.3	ILMN_1768867	0002230603	S	3646	TCTTGAATCCATGTGGCGTTTTCTCTGTCCTGCTGCTTCTTTTGGCCTCC	5	-	77447810-77447814:77452082-77452126	5q14.1b	Homo sapiens adaptor-related protein complex 3, beta 1 subunit (AP3B1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9151686] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process of directing proteins towards the lysosome using signals contained within the protein [goid 6622] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 9931340] [evidence TAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses lipid antigen of exogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family [goid 48007] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	ADTB3; ADTB3A; HPS; PE; HPS2	ADTB3; ADTB3A; HPS; PE; HPS2
Homo sapiens	RefSeq	XM_942578.1	ILMN_1196	AMAC1L2	NM_054028.1	NM_054028.1		83650	16876446	NM_054028.1	AMAC1L2	NP_473369.1	ILMN_1713315	0006400661	S	1043	TCTGACATCATGGGGGCAGGGGTTGTGCTGGGCAGCATTGCCATCATTAC	8	+	11189537-11189586	8p23.1b	Homo sapiens acyl-malonyl condensing enzyme 1-like 2 (AMAC1L2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AMAC	
Homo sapiens	RefSeq	NM_054028.1	ILMN_1196	AMAC1L2	NM_054028.1	NM_054028.1		83650	16876446	NM_054028.1	AMAC1L2	NP_473369.1	ILMN_1715988	0002600022	S	633	TCATTCTGGGACCTGGACTCTGGACACTACAGGAGGGGACCACAGGTGTC	8	+	11189127-11189176	8p23.1b	Homo sapiens acyl-malonyl condensing enzyme 1-like 2 (AMAC1L2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AMAC	AMAC
Homo sapiens	Unigene	Hs.543863	ILMN_107377	HS.543863	Hs.543863		Hs.543863		6703708	AW297072			ILMN_1896737	0006060136	S	372	GGTGTCATAGTAGTGGAGCATACAGTCAGCAGGGGTTGGAGAAGAGGAAG	5	-	147622725-147622774		UI-H-BI2-aie-a-06-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2728978 3, mRNA sequence					
Homo sapiens	RefSeq	XR_036973.1	ILMN_337871	LOC100133288	XR_036973.1	XR_036973.1		100133288	169172702	XR_036973.1	LOC100133288		ILMN_3238099	0006840673	S	419	ACAAGGACCCCAGAGTCCAAGAAAATCCTGATGATCAGAGAACGGTCCCC	8	-	119742-119791		PREDICTED: Homo sapiens misc_RNA (LOC100133288), miscRNA.					
Homo sapiens	RefSeq	NM_021809.4	ILMN_174411	TGIF2	NM_021809.5	NM_021809.5		60436	125661061	NM_021809.5	TGIF2	NP_068581.1	ILMN_1709044	0001340020	S	3174	GTGCACTGAGCAATGGAGGGTGGTGAGGGAGCCATGCTGCTGAATTCTGG	20	+	34655535-34655584	20q11.23a	Homo sapiens TGFB-induced factor homeobox 2 (TGIF2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11006116] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11006116] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11006116] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	XM_001714765.1	ILMN_342431	LOC100134152	XM_001714765.1	XM_001714765.1		100134152	169184623	XM_001714765.1	LOC100134152	XP_001714817.1	ILMN_3241568	0000620671	S	870	TGTTTATGGGGGTGCCTCTTCTATGCTGCTTCGGTGCTGGGAGCTATCAC					PREDICTED: Homo sapiens similar to synaptotagmin XV-b (LOC100134152), mRNA.					
Homo sapiens	RefSeq	XM_001718934.1	ILMN_347392	LOC100129950	XM_001718934.1	XM_001718934.1		100129950	169162478	XM_001718934.1	LOC100129950	XP_001718986.1	ILMN_3267309	0004230288	M	18	TTGGTGCCAAAACCCAGGACAGGGGGACTCCTTCTGGAGACCTGTCCCAT				1q41e	PREDICTED: Homo sapiens similar to UCA1 protein (LOC100129950), mRNA.					
Homo sapiens	RefSeq	XM_001723218.1	ILMN_346139	LOC649330	XM_001723218.1	XM_001723218.1		649330	169217503	XM_001723218.1	LOC649330	XP_001723270.1	ILMN_3244579	0006450673	S	1481	GGAGTTAGAAGTATGTGTGTTACACCCCATGTCAGTGTGCTGTGTGGGGC					PREDICTED: Homo sapiens similar to heterogeneous nuclear ribonucleoprotein C-like 1 (LOC649330), mRNA.					
Homo sapiens	RefSeq	XM_929112.1	ILMN_164487	LOC648509	XR_018376.1	XR_018376.1		648509	113414246	XR_018376.1	LOC648509		ILMN_1696469	0002970220	S	817	ATTACGACAGCAAGATGGAGAATTGCGTGTGCACCCTGAGGAACCTGTCC					PREDICTED: Homo sapiens similar to plakophilin 4 isoform a (LOC648509), mRNA.					
Homo sapiens	RefSeq	NM_015569.2	ILMN_21225	DNM3	NM_015569.2	NM_015569.2		26052	42544242	NM_015569.2	DNM3	NP_056384.2	ILMN_1680928	0002190475	S	7213	CACTTGCCTTGTCTGCTACCAGTTTGTTAAAAATTATTCCCCCCAACCAG	1	+	170648066-170648115	1q24.3b-q24.3c	Homo sapiens dynamin 3 (DNM3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15252009] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC70433; KIAA0820; Dyna III	MGC70433; KIAA0820; Dyna III
Homo sapiens	RefSeq	NM_015111.1	ILMN_16173	N4BP3	NM_015111.1	NM_015111.1		23138	62177128	NM_015111.1	N4BP3	NP_055926.1	ILMN_1678531	0000620010	S	5553	GCTGGCTCACTCATCCGTCCAGGAGGTGGGTCTCATGGTTTCATTTTGCT	5	+	177485279-177485328	5q35.3b	Homo sapiens Nedd4 binding protein 3 (N4BP3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]			KIAA0341	KIAA0341
Homo sapiens	RefSeq	NM_002624.2	ILMN_32421	PFDN5	NM_002624.3	NM_002624.3		5204	88999578	NM_002624.3	PFDN5	NP_002615.2	ILMN_1755536	0001170619	A	459	GGAGAAAATCCAACCAGCTCTTCAGGAGAAGCACGCCATGAAACAGGCCG	12	+	51978155-51978201:51979320-51979322	12q13.13e	Homo sapiens prefoldin subunit 5 (PFDN5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9792694] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9792694] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9792694] [evidence TAS]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	MM-1; PFD5; MGC71907; MGC5329; MM1	MM-1; MGC71907; MGC5329; MM1; PFD5
Homo sapiens	RefSeq	NM_080682.1	ILMN_26453	VCAM1	NM_080682.1	NM_080682.1		7412	18201908	NM_080682.1	VCAM1	NP_542413.1	ILMN_2325763	0001240519	A	1436	ATATGACATGCTTGAGCCAGGGCTTTCCTGCTCCGAAAATCCTGTGGAGC	1	+	100970628-100970677	1p21.2a	Homo sapiens vascular cell adhesion molecule 1 (VCAM1), transcript variant 2, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9290466] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [pmid 12082081] [evidence IDA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [pmid 1377228] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [pmid 12082081] [evidence IDA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [pmid 12082081] [evidence IDA]	The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [pmid 1715889] [evidence IDA]; The initial attachment of a membrane to a target membrane, mediated by proteins protruding from the two membranes. Docking requires only that the membranes come close enough for the proteins to interact and adhere [goid 22614] [pmid 12082081] [evidence IEP]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 1715889] [evidence IC ]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [pmid 1381355] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels mediated primarily by selectins and which are typically the first step in cellular extravasation [goid 50901] [pmid 2688898] [evidence IEP]	Interacting selectively with an integrin [goid 5178] [pmid 1377228] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	INCAM-100; MGC99561; DKFZp779G2333; CD106	INCAM-100; MGC99561; DKFZp779G2333; CD106
Homo sapiens	RefSeq	XM_936643.1	ILMN_40061	LOC647592	XM_936643.1	XM_936643.1		647592	88998837	XM_936643.1	LOC647592	XP_941736.1	ILMN_1748742	0000520286	S	1011	CCCAGAGTGCTGGGATTACAGTTGTGAGCCACTGTGCCTGGTCTTTCTTT					PREDICTED: Homo sapiens similar to DNA primase large subunit, 58kDa (LOC647592), mRNA.					
Homo sapiens	RefSeq	NM_020800.1	ILMN_180232	IFT80	NM_020800.1	NM_020800.1		57560	46409656	NM_020800.1	IFT80	NP_065851.1	ILMN_2156115	0000060113	S	3906	CTGCAAACCCATTTCTGAAAATGGTACATTATAGGGTGGGTATAGATGCA	3	-	161457818-161457867	3q26.1a	Homo sapiens intraflagellar transport 80 homolog (Chlamydomonas) (IFT80), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			WDR56; MGC126543; KIAA1374	WDR56; MGC126543; KIAA1374
Homo sapiens	RefSeq	NM_020800.1	ILMN_180232	IFT80	NM_020800.1	NM_020800.1		57560	46409656	NM_020800.1	IFT80	NP_065851.1	ILMN_1760617	0000730064	S	3491	AAGGAGAATAGTGGTTGCCAGGGACTGCAGGGAGGAGGAAATGGGGGGTG	3	-	161458233-161458282	3q26.1a	Homo sapiens intraflagellar transport 80 homolog (Chlamydomonas) (IFT80), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			WDR56; MGC126543; KIAA1374	WDR56; MGC126543; ATD2; KIAA1374
Homo sapiens	RefSeq	NM_001008222.1	ILMN_9046	ZDHHC9	NM_001008222.1	NM_001008222.1		51114	56682973	NM_001008222.1	ZDHHC9	NP_001008223.1	ILMN_2254574	0001470026	I	113	CCGCTGGGGAGCCGGTCGCTGCTTCCCGACGGATTTTGATCTTTGTTCTT	X	-	128977306-128977355	Xq25h	Homo sapiens zinc finger, DHHC-type containing 9 (ZDHHC9), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF379; CGI-89; ZDHHC10; ZNF380; DHHC9; CXorf11	ZNF379; CGI-89; ZDHHC10; ZNF380; DHHC9; CXorf11
Homo sapiens	RefSeq	NM_016073.2	ILMN_14316	HDGFRP3	NM_016073.2	NM_016073.2		50810	21359902	NM_016073.2	HDGFRP3	NP_057157.1	ILMN_1784256	0003460296	S	1501	TAAAGCTGGAATCAGCAACAGCCCTATGGGAAACCAGACAAAGCATTGAC	15	-	83807238-83807287	15q25.2b	Homo sapiens hepatoma-derived growth factor, related protein 3 (HDGFRP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10581169] [evidence IDA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10581169] [evidence NAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	HDGF2; CGI-142	HDGF2; CGI-142
Homo sapiens	RefSeq	XR_038766.1	ILMN_352031	LOC644363	XR_038766.1	XR_038766.1		644363	169173349	XR_038766.1	LOC644363		ILMN_3295419	0000670577	M	2602	AGTTCCATGTTTCCTTTTGCGTGATCTCTGTTGACGGCACTCTGGAATTG				8q21.12a	PREDICTED: Homo sapiens misc_RNA (LOC644363), miscRNA.					
Homo sapiens	RefSeq	NM_007211.2	ILMN_22635	RASSF8	NM_007211.3	NM_007211.3		11228	142358191	NM_007211.3	RASSF8	NP_009142.2	ILMN_1736741	0001440315	S	2172	GTCAAAAAGATAAGAGATAGCAAGTGTCAGCAAGGGTCTGGAGAAAAGGG	12	+	26123944-26123993	12p12.1a	Homo sapiens Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 (RASSF8), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		C12orf2; HoJ-1	C12orf2; HoJ-1
Homo sapiens	RefSeq	XM_937998.2	ILMN_45581	LOC123855	XM_937998.2	XM_937998.2		123855	113426527	XM_937998.2	LOC123855	XP_943091.2	ILMN_3200867	0000730347	A	3020	CTGCGGGGGCTGGGAGGGCCGTTGTCTAGGAGATGTTTATGGGGGAAATT				16q24.1b	PREDICTED: Homo sapiens similar to hCG2042536 (LOC123855), mRNA.					
Homo sapiens	RefSeq	NM_213656.2	ILMN_171984	KRT39	NM_213656.2	NM_213656.2		390792	51491874	NM_213656.2	KRT39	NP_998821.2	ILMN_1727626	0003450451	S	365	ACCTGCAAAAGGTGCGAATGCTAGAACGAGAGAATGCTGAACTGGAATCC	17	-	36376256-36376305	17q21.2a	Homo sapiens keratin 39 (KRT39), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	KA35	
Homo sapiens	RefSeq	NM_213656.2	ILMN_171984	KRT39	NM_213656.2	NM_213656.2		390792	51491874	NM_213656.2	KRT39	NP_998821.2	ILMN_2114137	0000520348	S	1375	CACTGCAGTGCCTGCGGACCCCTGTCCCAGATACTGGTTAAAATTTGCAC	17	-	36368466-36368515	17q21.2a	Homo sapiens keratin 39 (KRT39), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	KA35	KA35
Homo sapiens	RefSeq	XR_037953.1	ILMN_334806	KRT18P17	XR_037953.1	XR_037953.1		344866	169165490	XR_037953.1	KRT18P17		ILMN_3252936	0001090674	M	1084	ACGAGACCCTGCTGAACATCAATGTCAAGCTGGAGGCTGAGATTGCCACC				3p25.1d	PREDICTED: Homo sapiens misc_RNA (KRT18P17), miscRNA.					
Homo sapiens	RefSeq	NR_002560.1	ILMN_21164	SNORD31	NR_002560.1	NR_002560.1		9298	74315926	NR_002560.1	SNORD31		ILMN_2072391	0006660010	S	1	CACCAGTGATGAGTTGAATACCGCCCCAGTCTGATCAATGTGTGACTGAA	11	-	62620815-62620864	11q12.3b	Homo sapiens small nucleolar RNA, C/D box 31 (SNORD31), small nucleolar RNA.				RNU31; U31	RNU31; U31
Homo sapiens	RefSeq	NM_001630.2	ILMN_2382	ANXA8L2	NM_001630.2	NM_001630.2		244	91807121	NM_001630.2	ANXA8L2	NP_001621.2	ILMN_2186983	0007330132	S	160	CTCCGTGAGAAAGGTGCCCCCGAAGTGAAAGAGATGGCCTGGTGGAAAGC	10	+	47217085-47217117:47217118-47217134	10q11.22b	Homo sapiens annexin A8-like 2 (ANXA8L2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	ANXA8L2; FLJ32754; ANX8; ANXA8; VAC beta; bA145E20.2	ANXA8L2; FLJ32754; ANX8; VAC beta
Homo sapiens	RefSeq	NM_004794.2	ILMN_2535	RAB33A	NM_004794.2	NM_004794.2		9363	34485717	NM_004794.2	RAB33A	NP_004785.1	ILMN_1724708	0006270301	S	741	CCAGGTGCCCTCCAACTTAGCCCTGAAATTTGCTGATGCCCACAACATGC	X	+	129146158-129146207	Xq25h	Homo sapiens RAB33A, member RAS oncogene family (RAB33A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 7688322] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RabS10; MGC1488	RabS10; MGC1488
Homo sapiens	RefSeq	XM_001722123.1	ILMN_343697	LOC100133616	XM_001722123.1	XM_001722123.1		100133616	169162100	XM_001722123.1	LOC100133616	XP_001722175.1	ILMN_3242642	0000160379	S	326	TAAGGTGTTTAGCAGCAGCCCTGCTCACTTTGGTCTTGTCCGCAACGGAC					PREDICTED: Homo sapiens hypothetical protein LOC100133616 (LOC100133616), mRNA.					
Homo sapiens	RefSeq	NM_001665.2	ILMN_16348	RHOG	NM_001665.3	NM_001665.3		391	147899824	NM_001665.3	RHOG	NP_001656.2	ILMN_1739792	0004010753	S	1098	TCAGCCATCTCTAACCTCTGCCCTCGCTGCTCTTGGAATTGCGCCCCCAA	11	-	3848379-3848428	11p15.4d	Homo sapiens ras homolog gene family, member G (rho G) (RHOG), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 1620121] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 1620121] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 1620121] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12879077] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC125836; MGC125835; ARHG	MGC125836; MGC125835; ARHG
Homo sapiens	RefSeq	XM_001716224.1	ILMN_334823	LOC100134279	XM_001716224.1	XM_001716224.1		100134279	169171645	XM_001716224.1	LOC100134279	XP_001716276.1	ILMN_3235547	0005090358	S	633	AGTCCAGGTGAAGTCCACCCTCTATGCCTCCAGGACATCCACCCACTCTT					PREDICTED: Homo sapiens hypothetical LOC100134279 (LOC100134279), partial mRNA.					
Homo sapiens	RefSeq	XM_942039.3	ILMN_35169	LOC388339	XM_942039.3	XM_942039.3		388339	169211630	XM_942039.3	LOC388339	XP_947132.1	ILMN_3279675	0006330408	M	356	AACGGTCTGGACAACGAGCTCCGTGAAGACCTGGAGCGACTGAAGAATAT				17p12b	PREDICTED: Homo sapiens similar to ribosomal protein, transcript variant 4 (LOC388339), mRNA.					
Homo sapiens	RefSeq	NM_017644.3	ILMN_26914	KLHL24	NM_017644.3	NM_017644.3		54800	62865888	NM_017644.3	KLHL24	NP_060114.2	ILMN_1678671	0006620201	S	7103	GACCTAAGGTCATTTGCTTTCAATTAGAGGCTCCAGAGTCTTCATAGTGG	3	+	183402079-183402128	3q27.1a	Homo sapiens kelch-like 24 (Drosophila) (KLHL24), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ25796; KRIP6; DRE1	FLJ25796; KRIP6; DRE1
Homo sapiens	RefSeq	NM_014708.3	ILMN_25890	KNTC1	NM_014708.3	NM_014708.3		9735	41327744	NM_014708.3	KNTC1	NP_055523.1	ILMN_1732516	0003190524	S	6718	GCACTGCGGGAAACCTGTGCCTCCAGACACTGCTCCCTGTGAAATTCTGA	12	+	121675137-121675186	12q24.31c	Homo sapiens kinetochore associated 1 (KNTC1), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [pmid 11146660] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11146660] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the spindle microtubules that attach to the kinetochores of chromosomes by their plus ends, and maneuver the chromosomes during mitotic or meiotic chromosome segregation [goid 5828] [pmid 11146660] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 11146660] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 11146660] [evidence IDA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [pmid 11146660] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	FLJ36151; KIAA0166; ROD	FLJ36151; KIAA0166; ROD
Homo sapiens	RefSeq	XM_939486.1	ILMN_42558	LOC400095	XM_939486.1	XM_939486.1		400095	89036932	XM_939486.1	LOC400095	XP_944579.1	ILMN_1708243	0002970192	S	688	GGAGAAAATGCCTGTTGGAATATACCAGGTTATGATTGTAGAGTGAAGAT					PREDICTED: Homo sapiens similar to general transcription factor II, i isoform 1 (LOC400095), mRNA.					
Homo sapiens	RefSeq	XM_001133303.2	ILMN_181736	LOC728275	XM_001133303.2	XM_001133303.2		728275	169168911	XM_001133303.2	LOC728275	XP_001133303.2	ILMN_3214395	0000450347	A	595	ATTCTGGACGGAGACTCAGGAGAGGAAGCCGAGACAACGACGCCACAGTG				6q26c-q27a	PREDICTED: Homo sapiens hypothetical LOC728275 (LOC728275), mRNA.					
Homo sapiens	RefSeq	NR_029620.1	ILMN_388228	MIR203	NR_029620.1	NR_029620.1		406986	262206272	NR_029620.1	MIR203		ILMN_3310950	0002360369	S	45	ACAGTTCTGTAGCGCAATTGTGAAATGTTTAGGACCACTAGACCCGGCGG				14q32.33a	Homo sapiens microRNA 203 (MIR203), microRNA.					
Homo sapiens	RefSeq	NM_005406.1	ILMN_183770	ROCK1	NM_005406.2	NM_005406.2		6093	112382209	NM_005406.2	ROCK1	NP_005397.1	ILMN_1808768	0006520494	S	4150	GTGCACATAGGAATGAGCTTCAGATGCAGTTGGCCAGCAAAGAGAGTGAT	18	-	18546971-18547020	18q11.1c-q11.1d	Homo sapiens Rho-associated, coiled-coil containing protein kinase 1 (ROCK1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16983089] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10436159] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 8798490] [evidence TAS]; The initial attachment of a membrane to a target membrane, mediated by proteins protruding from the two membranes. Docking requires only that the membranes come close enough for the proteins to interact and adhere [goid 22614] [pmid 12082081] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10436159] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [pmid 12082081] [evidence IDA]; Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels mediated primarily by selectins and which are typically the first step in cellular extravasation [goid 50901] [pmid 12082081] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8798490] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16249185] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P160ROCK; MGC131603; MGC43611	P160ROCK; MGC131603; MGC43611
Homo sapiens	RefSeq	XM_940830.1	ILMN_183770	ROCK1	NM_005406.2	NM_005406.2		6093	112382209	NM_005406.2	ROCK1	NP_005397.1	ILMN_1739583	0003170707	S	6337	GCAGTAATGTGTATCAGATAAGAAGCACTGGAAAACCGATCGTCTCTAGG	18	-	18529964-18530013	18q11.1c-q11.1d	Homo sapiens Rho-associated, coiled-coil containing protein kinase 1 (ROCK1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16983089] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10436159] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 8798490] [evidence TAS]; The initial attachment of a membrane to a target membrane, mediated by proteins protruding from the two membranes. Docking requires only that the membranes come close enough for the proteins to interact and adhere [goid 22614] [pmid 12082081] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10436159] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [pmid 12082081] [evidence IDA]; Transient adhesive interactions between leukocytes and endothelial cells lining blood vessels mediated primarily by selectins and which are typically the first step in cellular extravasation [goid 50901] [pmid 12082081] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8798490] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16249185] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P160ROCK; MGC131603; MGC43611	
Homo sapiens	RefSeq	NM_022167.1	ILMN_26042	XYLT2	NM_022167.2	NM_022167.2		64132	110611245	NM_022167.2	XYLT2	NP_071450.2	ILMN_1799815	0006250465	S	3422	CCAGGTGTGCACTGGAAGTGAGGTCACATGAGCAGCGTGGGAAGAAGACT	17	+	45793366-45793415	17q21.33b	Homo sapiens xylosyltransferase II (XYLT2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [pmid 11099377] [evidence NAS]	Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate [goid 30158] [pmid 11099377] [evidence NAS]	XT2; XT-II; xylT-II	XT2; XT-II; xylT-II
Homo sapiens	RefSeq	NM_201997.1	ILMN_2017	SF1	NM_201997.1	NM_201997.1		7536	42544126	NM_201997.1	SF1	NP_973726.1	ILMN_1742808	0001400747	A	425	GCGGAAGAGGAGCCGCTGGAACCAAGACACAATGGAACAGAAGACAGTGA	11	-	64544032-64544081	11q13.1b	Homo sapiens splicing factor 1 (SF1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7912130] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7912130] [evidence NAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9731529] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 8752089] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 7912130] [evidence ND ]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 8752089] [evidence NAS]; Recognition of the intron 3'-splice site by components of the assembling U2- or U12-type spliceosome [goid 389] [pmid 15647371] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [pmid 7912130] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9660765] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9660765] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8752089] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18305892] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	D11S636; ZNF162; ZFM1	D11S636; ZNF162; ZFM1
Homo sapiens	RefSeq	NM_201997.1	ILMN_2017	SF1	NM_201997.1	NM_201997.1		7536	42544126	NM_201997.1	SF1	NP_973726.1	ILMN_1776077	0003610743	I	760	GGTAGGGTTTCACTTAGGAGTAAGAACAGTCCCCAGTCCAGCAGCCACCC	11	-	64543697-64543746	11q13.1b	Homo sapiens splicing factor 1 (SF1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7912130] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7912130] [evidence NAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9731529] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 8752089] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 7912130] [evidence ND ]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 8752089] [evidence NAS]; Recognition of the intron 3'-splice site by components of the assembling U2- or U12-type spliceosome [goid 389] [pmid 15647371] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [pmid 7912130] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9660765] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9660765] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8752089] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18305892] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	D11S636; ZNF162; ZFM1	D11S636; ZNF162; ZFM1
Homo sapiens	RefSeq	NM_018247.2	ILMN_28236	TMEM30A	NM_018247.2	NM_018247.2		55754	52694667	NM_018247.2	TMEM30A	NP_060717.1	ILMN_1735680	0001240039	S	4212	GGAGGGTGGAGGGAGTAGGGAAGTGGTCCTTTTACAAGAATTTTGATGCA	6	-	76019500-76019549	6q14.1a	Homo sapiens transmembrane protein 30A (TMEM30A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ10856; C6orf67; CDC50A	FLJ10856; C6orf67; CDC50A
Homo sapiens	RefSeq	NM_012264.3	ILMN_10219	TMEM184B	NM_012264.3	NM_012264.3		25829	63259328	NM_012264.3	TMEM184B	NP_036396.2	ILMN_1747460	0007610369	S	3174	ATTCCCACTCCCTTGGTTTTCGCCTGCCCAGCGTTGCTGTTTGCGTGGAG	22	-	38615661-38615710	22q13.1b	Homo sapiens transmembrane protein 184B (TMEM184B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp686N1150; DKFZP586A1024; FM08; DKFZp686F07174; HS5O6A; C22orf5	DKFZp686N1150; DKFZP586A1024; FM08; DKFZp686F07174; HS5O6A; C22orf5
Homo sapiens	RefSeq	NM_018115.1	ILMN_2166	SDAD1	NM_018115.2	NM_018115.2		55153	153791299	NM_018115.2	SDAD1	NP_060585.2	ILMN_1735360	0006620441	S	2912	CATCATTTGAGCTGCCTTCATACTGGTTTCCTCAGCCTTCCTTCAGCCTG	4	-	77090148-77090197	4q21.1a	Homo sapiens SDA1 domain containing 1 (SDAD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11790298] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DKFZp686E22207; FLJ10498	DKFZp686E22207; FLJ10498
Homo sapiens	RefSeq	XM_936486.1	ILMN_43419	LOC647415	XM_936486.1	XM_936486.1		647415	89025765	XM_936486.1	LOC647415	XP_941579.1	ILMN_1713818	0005080382	S	946	GTAGGGAAATAGTTTCTGGTCATGACGAGGTTCCACTTCCCATCTGATCC				7p22.1a	PREDICTED: Homo sapiens similar to beta-1,4-mannosyltransferase (LOC647415), mRNA.					
Homo sapiens	RefSeq	NM_001001915.1	ILMN_176924	OR2G2	NM_001001915.1	NM_001001915.1		81470	50054472	NM_001001915.1	OR2G2	NP_001001915.1	ILMN_1772179	0003130408	S	707	GGAGACAGAAAGCATTCGGGACCTGCTTCTCCCACCTGACAGTGGTCACC	1	+	245818991-245819040	1q44e	Homo sapiens olfactory receptor, family 2, subfamily G, member 2 (OR2G2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-32	OR1-32
Homo sapiens	RefSeq	NM_003473.2	ILMN_164811	STAM	NM_003473.2	NM_003473.2		8027	21265027	NM_003473.2	STAM	NP_003464.1	ILMN_1765409	0000770619	S	2493	TCTGTAGCCTCTGCATACTACTGGCTGTCATCACACCAGCGTACAGTAGC	10	+	17757094-17757143	10p12.33c	Homo sapiens signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 (STAM), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15962011] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12218189] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10567358] [evidence EXP]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8780729] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8780729] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10383417] [evidence IPI]	DKFZp686J2352; STAM1	DKFZp686J2352; STAM1
Homo sapiens	RefSeq	NM_181361.1	ILMN_16032	KCNMB2	NM_181361.1	NM_181361.1		10242	31317294	NM_181361.1	KCNMB2	NP_852006.1	ILMN_2237601	0003120603	I	183	TGATGATTACCGGTGGCTATTTGGAGGACTGCACCGGATCGCTGTCATTA	3	+	178254406-178254455	3q26.32c	Homo sapiens potassium large conductance calcium-activated channel, subfamily M, beta member 2 (KCNMB2), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 10692449] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal [goid 5513] [pmid 10692449] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10692449] [evidence IDA]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [pmid 10692449] [evidence IDA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 10692449] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 8200] [pmid 10097176] [evidence TAS]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [pmid 10692449] [evidence IDA];  [goid 15459] [pmid 10097176] [evidence TAS]	MGC22431	MGC22431
Homo sapiens	Unigene	Hs.571831	ILMN_124012	HS.571831	Hs.571831		Hs.571831		4664360	AI627560			ILMN_1830015	0000290059	S	224	AACCGGAATGAAAAGGGCGGCCCGAGGTGCTCGGGCAGGGAAATTTTTGC					ty18a05.x1 NCI_CGAP_Ut3 Homo sapiens cDNA clone IMAGE:2279408 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000923.1	ILMN_29696	PDE4C	NM_000923.1	NM_000923.1		5143	4505664	NM_000923.1	PDE4C	NP_000914.1	ILMN_1761277	0006900669	S	3087	GCTATGACTGCATCACTGCACTCCAGCCTGGGCAACACAGCAAGATCCTG	19	-	18181755-18181804	19p13.11c	Homo sapiens phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila) (PDE4C), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [pmid 9349724] [evidence NAS]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [pmid 9349724] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PDE4C-791; DPDE1; MGC126222	PDE4C-791; DPDE1; MGC126222
Homo sapiens	RefSeq	XM_939015.1	ILMN_39552	LOC649935	XM_939015.1	XM_939015.1		649935	89030278	XM_939015.1	LOC649935	XP_944108.1	ILMN_1671555	0001030082	S	1142	GTAAGAACATGAGGGTGTTAAGTAGAACATCAAAATTCAGGAGAGTAAGA				2p14a	PREDICTED: Homo sapiens hypothetical protein LOC649935 (LOC649935), mRNA.					
Homo sapiens	Unigene	Hs.367995	ILMN_87688	HS.367995	Hs.367995		Hs.367995		27842759	BX096345			ILMN_1906851	0003120356	S	384	CCTCTGTGTACTTTATCAACCCTTTATGGTGCAACATGAGAAGGAAAGGG	8	+	4969096-4969145		BX096345 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998I213558, mRNA sequence					
Homo sapiens	RefSeq	NM_198183.1	ILMN_21280	UBE2L6	NM_198183.1	NM_198183.1		9246	38157985	NM_198183.1	UBE2L6	NP_937826.1	ILMN_2252495	0001570494	I	1	AAGACTGGAACCCGTATGAGCGCCCCCCAGCGCCCCTGAGCGCTCGCCGC	11	-	57335403-57335452	11q12.1a	Homo sapiens ubiquitin-conjugating enzyme E2L 6 (UBE2L6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent addition to a protein of ISG15, a ubiquitin-like protein [goid 32020] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent addition to a protein of ISG15, a ubiquitin-like protein [goid 32020] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9153201] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10085091] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the covalent attachment of the ubiquitin-like protein ISG15 to other proteins [goid 42296] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the covalent attachment of the ubiquitin-like protein ISG15 to other proteins [goid 42296] [evidence IEA]	UBCH8; RIG-B; MGC40331	UBCH8; RIG-B; MGC40331
Homo sapiens	RefSeq	NM_001012426.1	ILMN_176687	FOXP4	NM_001012426.1	NM_001012426.1		116113	60498988	NM_001012426.1	FOXP4	NP_001012426.1	ILMN_2316740	0001400402	A	5476	ACTGGAGTCAATCACCCTTCCCACAAATCACCAAACTGCTGGAACTCTCC	6	+	41569649-41569698	6p21.1g	Homo sapiens forkhead box P4 (FOXP4), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ44184; FLJ40908; hFKHLA	FLJ44184; FLJ40908; hFKHLA
Homo sapiens	RefSeq	NM_024333.1	ILMN_13664	FSD1	NM_024333.1	NM_024333.1		79187	13236584	NM_024333.1	FSD1	NP_077309.1	ILMN_1813490	0003170019	I	1608	GAGCCAGGCACCCTCCTCTGTCACTTGCTGCTTGGAGCCTTAACTCCAGA	19	+	4274704-4274753	19p13.3d	Homo sapiens fibronectin type III and SPRY domain containing 1 (FSD1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		MIR1; MGC3213; GLFND	MIR1; MGC3213; GLFND
Homo sapiens	RefSeq	NM_024333.1	ILMN_13664	FSD1	NM_024333.1	NM_024333.1		79187	13236584	NM_024333.1	FSD1	NP_077309.1	ILMN_1694755	0001510176	A	907	ATCTCTCCGTGGAGTGGGACGCTATGGGCGGGAAGGTGCAGGATATCAAG	19	+	4269397-4269446	19p13.3d	Homo sapiens fibronectin type III and SPRY domain containing 1 (FSD1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		MIR1; MGC3213; GLFND	MIR1; MGC3213; GLFND
Homo sapiens	RefSeq	NM_024333.1	ILMN_13664	FSD1	NM_024333.1	NM_024333.1		79187	13236584	NM_024333.1	FSD1	NP_077309.1	ILMN_1733781	0007320059	I	1494	CTGCAAAAGCGAGGCAGTGCTACCAGCAGCTCCAACACCAGCCTCACCTA	19	+	4274590-4274639	19p13.3d	Homo sapiens fibronectin type III and SPRY domain containing 1 (FSD1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		MIR1; MGC3213; GLFND	MIR1; MGC3213; GLFND
Homo sapiens	RefSeq	NM_024333.1	ILMN_13664	FSD1	NM_024333.1	NM_024333.1		79187	13236584	NM_024333.1	FSD1	NP_077309.1	ILMN_2376980	0001580156	A	718	TCGAGGGCATCCGGCAGACAGAGTACACCCTGACAGGTCTCAAGTTTGAC	19	+	4263013-4263048:4268179-4268192	19p13.3d	Homo sapiens fibronectin type III and SPRY domain containing 1 (FSD1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		MIR1; MGC3213; GLFND	MIR1; MGC3213; GLFND
Homo sapiens	RefSeq	XM_940073.1	ILMN_13664	FSD1	NM_024333.1	NM_024333.1		79187	13236584	NM_024333.1	FSD1	NP_077309.1	ILMN_1689646	0007330619	A	992	TCCCATCAACTCCCCAGCCAGAGGTACTCCATCTCCCAAGAGGATGCCCT	19	+	4269482-4269502:4269869-4269897	19p13.3d	Homo sapiens fibronectin type III and SPRY domain containing 1 (FSD1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		MIR1; MGC3213; GLFND	
Homo sapiens	RefSeq	NM_024783.2	ILMN_27467	AGBL2	NM_024783.2	NM_024783.2		79841	31657118	NM_024783.2	AGBL2	NP_079059.2	ILMN_1688627	0004890338	S	2689	CAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGAT	11	-	47688514-47688563	11p11.2b	Homo sapiens ATP/GTP binding protein-like 2 (AGBL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ23598	FLJ23598
Homo sapiens	RefSeq	XM_943528.1	ILMN_137323	MAP3K2	XM_943528.1	XM_943528.1		10746	88957100	XM_943528.1	MAP3K2	XP_948621.1	ILMN_1696265	0006180142	I	149	TGGAGATGCTCATGGAAGAACTTGACCTGGTGAGATAGCTGCATGGTTCC				2q14.3d	PREDICTED: Homo sapiens mitogen-activated protein kinase kinase kinase 2, transcript variant 3 (MAP3K2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 8621389] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8621389] [evidence TAS]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_023002.1	ILMN_25566	HAPLN4	NM_023002.1	NM_023002.1		404037	30794471	NM_023002.1	HAPLN4	NP_075378.1	ILMN_2165463	0006510114	S	3168	GTCCCCCTGGGGCCCTCTTTACTGTCACGTCATCTCTAGGAAACCTATCT	19	-	19227636-19227685	19p13.11a	Homo sapiens hyaluronan and proteoglycan link protein 4 (HAPLN4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]	BRAL2; KIAA1926	BRAL2; KIAA1926
Homo sapiens	RefSeq	XM_943485.1	ILMN_175180	LOC648846	XM_001132883.1	XM_001132883.1		648846	113426042	XM_001132883.1	LOC648846	XP_001132883.1	ILMN_1776915	0000270451	S	515	CTGAGCTTCCTGGGAGGTCCGCACACCCCCAACCGCCCGATGCAAATTAA	16	+	31456647-31456696	16p11.2c	PREDICTED: Homo sapiens hypothetical LOC648846 (LOC648846), mRNA.					
Homo sapiens	RefSeq	XM_945470.1	ILMN_162009	LOC732300	XM_001134288.1	XM_001134288.1		732300	113418081	XM_001134288.1	LOC732300	XP_001134288.1	ILMN_1669103	0002630273	S	127	TCTACTCCGCCTCATCTTTGTCCCAAGTCCTTTCACAGTCTGCCTTCCTC					PREDICTED: Homo sapiens hypothetical protein LOC732300 (LOC732300), mRNA.					
Homo sapiens	RefSeq	NM_198401.2	ILMN_9031	ANKRD46	NM_198401.2	NM_198401.2		157567	50053931	NM_198401.2	ANKRD46	NP_940683.1	ILMN_1712298	0002750598	S	2442	CCTGAGTAACTGGCTGCTTCAGGATCAGCTTGCAGAGTCTTGCTTTTAGG	8	-	101602463-101602512	8q22.3a	Homo sapiens ankyrin repeat domain 46 (ANKRD46), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XR_039360.1	ILMN_349508	LOC729684	XR_039360.1	XR_039360.1		729684	169165386	XR_039360.1	LOC729684		ILMN_3305025	0006250703	M	419	CGGCAAAAAAGCCAAAGGAGTAAAGGTGCTGCAATGATGTTCTCTGTGGC				3p21.31k	PREDICTED: Homo sapiens misc_RNA (LOC729684), miscRNA.					
Homo sapiens	RefSeq	NM_174944.2	ILMN_23720	TSSK4	NM_174944.2	NM_174944.2		283629	42734400	NM_174944.2	TSSK4	NP_777604.2	ILMN_1723381	0006840414	S	1088	TGCTTGAGGCCATGTGCCAGCTCCACAACACCACTAAACAGCACCAATCC	14	+	23747125-23747174	14q12a	Homo sapiens testis-specific serine kinase 4 (TSSK4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 15964553] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor CREB [goid 32793] [pmid 15964553] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 15964553] [evidence IDA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 15964553] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15964553] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 15964553] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	C14orf20; c14_5117; MGC133264; TSSK5; STK22E	C14orf20; c14_5117; MGC133264; TSSK5; STK22E
Homo sapiens	RefSeq	NM_152658.1	ILMN_25578	THAP8	NM_152658.2	NM_152658.2		199745	141802733	NM_152658.2	THAP8	NP_689871.1	ILMN_1790109	0006400377	S	1480	CTCCCTCAAGGGCCTGGGTTCTACCACCCCACTCCTAGGGATCTCTTGAA	19	-	41218022-41218071	19q13.12b	Homo sapiens THAP domain containing 8 (THAP8), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ32891	FLJ32891
Homo sapiens	RefSeq	NM_006666.1	ILMN_9054	RUVBL2	NM_006666.1	NM_006666.1		10856	5730022	NM_006666.1	RUVBL2	NP_006657.1	ILMN_2120340	0004780537	S	866	GAGGAGGGCAAGGCGGAGATCATCCCTGGAGTGCTGTTCATCGACGAGGT	19	+	49514321-49514350:49514449-49514468	19q13.33a	Homo sapiens RuvB-like 2 (E. coli) (RUVBL2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10524211] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10524211] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]; A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60) [goid 35267] [pmid 10966108] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 10428817] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 10428817] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 10524211] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [pmid 10428817] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 10966108] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 10966108] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 10524211] [evidence TAS]	TIP49B; TIP48; TIH2; RVB2; CGI-46; ECP51	TIP49B; TIP48; TIH2; RVB2; CGI-46; ECP51
Homo sapiens	RefSeq	XM_945016.1	ILMN_32161	LOC654023	XM_945016.1	XM_945016.1		654023	89059169	XM_945016.1	LOC654023	XP_950109.1	ILMN_1660991	0004670367	I	250	CTTATGCCTGCTGAGCTCCCCAAATCCTTGTGAACGCATGGTTCCCGGCA					PREDICTED: Homo sapiens similar to glutathione S-transferase theta 1, transcript variant 2 (LOC654023), mRNA.					
Homo sapiens	RefSeq	NM_001040441.1	ILMN_165052	ZBTB8A	NM_001040441.1	NM_001040441.1		653121	94721341	NM_001040441.1	ZBTB8A	NP_001035531.1	ILMN_2264205	0004200402	I	1708	CCTATGTGGAGATTGTAGAAGATGGGTCTGGTGATCTGGTCATCCAACAG	1	+	32838504-32838553	1p35.1b	Homo sapiens zinc finger and BTB domain containing 8A (ZBTB8A), mRNA. XM_945039				FLJ90065; MGC17919; BOZF1	FLJ90065; MGC17919; BOZF1
Homo sapiens	RefSeq	NM_006379.2	ILMN_29382	SEMA3C	NM_006379.2	NM_006379.2		10512	32307182	NM_006379.2	SEMA3C	NP_006370.1	ILMN_1695475	0005670246	S	4694	GTCACAGTTCCCTTTATTTCACATAAGCCCAAACTGATAGACAGTAACGG	7	-	80372949-80372998	7q21.11c	Homo sapiens sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C (SEMA3C), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9168980] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 15609325] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 9405678] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SEMAE; SemE	SEMAE; SemE
Homo sapiens	RefSeq	XR_038491.1	ILMN_334954	LOC727764	XR_038491.1	XR_038491.1		727764	169166156	XR_038491.1	LOC727764		ILMN_3235662	0004040487	S	332	ACAGTGCCACCCTACGAGCTGCCCTGCAAAGAGTATGACGTGGCCAGAAA	4	-	58750-58799		PREDICTED: Homo sapiens misc_RNA (LOC727764), miscRNA.					
Homo sapiens	RefSeq	NM_012069.2	ILMN_29810	ATP1B4	NM_012069.2	NM_012069.2		23439	12965168	NM_012069.2	ATP1B4	NP_036201.1	ILMN_1653211	0006100706	S	3644	TGTGGCAGAAAGAATTGCTGTTCCTCTTTGGAATCTCCTTCCCAGACACC	X	+	119400042-119400091	Xq24d	Homo sapiens ATPase, (Na+)/K+ transporting, beta 4 polypeptide (ATP1B4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10456317] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]		
Homo sapiens	RefSeq	NM_173584.2	ILMN_13031	EFCAB4A	NM_173584.3	NM_173584.3		283229	150170652	NM_173584.3	EFCAB4A	NP_775855.3	ILMN_1745623	0000010592	S	1718	GTGTGTGCCCTCTGCCAGTCTTCGCTCTGTCCCCGTTCAATCAACCCCAT	11	+	821889-821938	11p15.5c	Homo sapiens EF-hand calcium binding domain 4A (EFCAB4A), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC45840; FLJ46033; MGC88858	MGC45840; FLJ46033; MGC88858
Homo sapiens	RefSeq	XM_940470.1	ILMN_32525	LOC651333	XM_940470.1	XM_940470.1		651333	89030521	XM_940470.1	LOC651333	XP_945563.1	ILMN_1789747	0002900138	S	798	CCATCATCTCTACAGCTCTCAGTACAGAGGAGACCCAGAGTGGGTAGCTC					PREDICTED: Homo sapiens hypothetical protein LOC651333 (LOC651333), mRNA.					
Homo sapiens	RefSeq	NR_024142.1	ILMN_366091	NCRNA00081	NR_024142.1	NR_024142.1		92482	201862261	NR_024142.1	NCRNA00081		ILMN_3304405	0004610022	M	294	CCGGGTTGGATGCTTAAAGCTGCAGCAAAAAGACCAGAACTTTCAGGGCC	10	-	112660280-112660284:112677879-112677923	10q25.2a	Homo sapiens non-protein coding RNA 81 (NCRNA00081), non-coding RNA.					
Homo sapiens	RefSeq	NM_018955.2	ILMN_8950	UBB	NM_018955.2	NM_018955.2		7314	22538474	NM_018955.2	UBB	NP_061828.1	ILMN_1762436	0006590463	S	64	GTGAGCTTGTTTGTGTCCCTGTGGGTGGACGTGGTTGGTGATTGGCAGGA	17	+	16225155-16225204	17p11.2i	Homo sapiens ubiquitin B (UBB), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ25987; MGC8385	FLJ25987; MGC8385
Homo sapiens	RefSeq	NM_018955.2	ILMN_8950	UBB	NM_018955.2	NM_018955.2		7314	22538474	NM_018955.2	UBB	NP_061828.1	ILMN_2191428	0004860286	S	791	CCCTGCACCTGGTCCTGCGCCTGAGGGGTGGCTGTTAATTCTTCAGTCAT	17	+	16226599-16226636:16226637-16226648	17p11.2i	Homo sapiens ubiquitin B (UBB), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ25987; MGC8385	FLJ25987; MGC8385
Homo sapiens	Unigene	Hs.583821	ILMN_136002	HS.583821	Hs.583821		Hs.583821		83119428	DB376202			ILMN_1858388	0000780605	S	289	CTTGGGCCAGGGGCTGGTGCCAGAGAGAGATGGATGACCAAGAGACATAA					DB376202 PLACE1 Homo sapiens cDNA clone PLACE1005864 3, mRNA sequence					
Homo sapiens	RefSeq	XM_941847.1	ILMN_138997	FLJ35424	XM_941847.1	XM_941847.1		285492	89062762	XM_941847.1	FLJ35424	XP_946940.1	ILMN_1738738	0005080427	A	92	TCCTGGTGAGAATCCCTTGGGCATCTGCACTTCCTGATGCACCTGCACTT				4p16.2c	PREDICTED: Homo sapiens hypothetical protein FLJ35424 (FLJ35424), mRNA.					
Homo sapiens	RefSeq	NM_022080.1	ILMN_7006	NAPB	NM_022080.1	NM_022080.1		63908	44917605	NM_022080.1	NAPB	NP_071363.1	ILMN_2181125	0002600491	S	3506	CGTGACCGTGTGTGGTGGCGTCACTGTAACCAAAGTATATGCACCAGCCC	20	-	23303396-23303445	20p11.21c	Homo sapiens N-ethylmaleimide-sensitive factor attachment protein, beta (NAPB), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	SNAP-BETA; MGC48335; MGC26066	SNAP-BETA; MGC48335; MGC26066
Homo sapiens	RefSeq	NM_001013675.1	ILMN_168263	LOC400891	NM_001013675.1	NM_001013675.1		400891	61966804	NM_001013675.1	LOC400891	NP_001013697.1	ILMN_1684704	0004590731	S	3030	TGGCGCTAAGTGAAAGAAGCCAGCCACAAGATCACGTGTCGCATGACCGC	22	+	19746369-19746418	22q11.21e	Homo sapiens similar to chromosome 14 open reading frame 166B (LOC400891), mRNA.					
Homo sapiens	RefSeq	XR_038892.1	ILMN_334063	LOC646301	XR_038892.1	XR_038892.1		646301	169211136	XR_038892.1	LOC646301		ILMN_3234967	0004220292	S	2679	GTGGGTCTGAAGAGCTTGGTTGCAGAAACTTCGGGGTCTACAAAGGCAGG	17	+	130986-131035		PREDICTED: Homo sapiens misc_RNA (LOC646301), miscRNA.					
Homo sapiens	RefSeq	NM_014565.1	ILMN_17965	OR1A1	NM_014565.1	NM_014565.1		8383	7657420	NM_014565.1	OR1A1	NP_055380.1	ILMN_1673466	0004260360	S	698	TGCTCAAGGCCTTCTCCACCTGTGGTTCCCACCTCACGGTTGTCTCTTTG	17	+	3066362-3066411	17p13.3b	Homo sapiens olfactory receptor, family 1, subfamily A, member 1 (OR1A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence NAS]	OR17-7	OR17-7
Homo sapiens	RefSeq	XM_932259.1	ILMN_170252	DKFZP686J0529	XM_496269.3	XM_496269.3		388468	113427682	XM_496269.3	DKFZp686J0529	XP_496269.2	ILMN_1753868	0002510221	A	891	CTGCCTGGTGGGGTAAGGTCCCCAGAAAGGATCTCATCGTCATGCTCAGG	18	-	14532659-14532708	18p11.21b	PREDICTED: Homo sapiens hypothetical protein DKFZp686J0529, transcript variant 1 (DKFZp686J0529), mRNA.					
Homo sapiens	Unigene	Hs.195389	ILMN_81333	HS.195389	Hs.195389		Hs.195389		27832818	BX104313			ILMN_1893675	0004060379	S	305	CTGGAGTGCTTCCACCCTGCTACACGGACAATGCCACAGTCTCACTTTTC	19	+	58984152-58984201		BX104313 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGp998E085554, mRNA sequence					
Homo sapiens	RefSeq	XM_001719868.1	ILMN_336692	LOC100129436	XM_001719868.1	XM_001719868.1		100129436	169169406	XM_001719868.1	LOC100129436	XP_001719920.1	ILMN_3178544	0006040239	A	825	CCTAGAGAGTGTCTCATACTTACAAACATACCTGCCTCTACTGGTCATCC	6	+	80308456-80308505	6q14.1c	PREDICTED: Homo sapiens hypothetical LOC100129436 (LOC100129436), mRNA.					
Homo sapiens	Unigene	Hs.371339	ILMN_88152	HS.371339	Hs.371339		Hs.371339		22019245	AL844467			ILMN_1836132	0003940367	S	554	GAGTGTGGGTTCTGCCATGGGTCACATCCGGGTTTTAATTCTGCCTCTGC	20	-	21021645-21021694		AL844467 Homo sapiens library (Ashcroft K) Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_032557.4	ILMN_162192	USP38	NM_032557.4	NM_032557.4		84640	31559774	NM_032557.4	USP38	NP_115946.2	ILMN_1704876	0007000379	S	4350	CAGGGAGTATATCTTCTGTGGTTTTGAAGGAGGTGAGTTCTGTATGTGCC	4	+	144361774-144361823	4q31.21c	Homo sapiens ubiquitin specific peptidase 38 (USP38), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	HP43.8KD; KIAA1891; FLJ35970	FLJ35970; HP43.8KD; KIAA1891
Homo sapiens	RefSeq	NM_001001522.1	ILMN_30232	TAGLN	NM_001001522.1	NM_001001522.1		6876	48255906	NM_001001522.1	TAGLN	NP_001001522.1	ILMN_1706783	0003360326	I	457	TAGGCCAAGGCTCTACTGTCTGTTGCCCCTCCAGGAGAACTTCCAAGGAG	11	+	116575706-116575755	11q23.3b	Homo sapiens transgelin (TAGLN), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9615232] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TAGLN1; WS3-10; SM22; DKFZp686P11128; SMCC	TAGLN1; WS3-10; SM22; DKFZp686P11128; SMCC
Homo sapiens	RefSeq	NM_001013695.1	ILMN_21477	LOC402110	NM_001013695.1	NM_001013695.1		402110	61966840	NM_001013695.1	LOC402110	NP_001013717.1	ILMN_1667443	0001690634	S	1930	CGTCCTGCGTCTTTTTGGGGAATCCTCGACAGGTGCTGGAAAATTGTGTT	2	-	48993154-48993203	4p11c	Homo sapiens hypothetical LOC402110 (LOC402110), mRNA.					
Homo sapiens	RefSeq	NM_012411.2	ILMN_25877	PTPN22	NM_012411.2	NM_012411.2		26191	15619017	NM_012411.2	PTPN22	NP_036543.2	ILMN_1715885	0003400440	A	1878	ACTAGCAACTGCTCCAAGGATAGATGATGAAATCCCCCCTCCACTTCCTG	1	-	114179093-114179138:114181735-114181738	1p13.2b	Homo sapiens protein tyrosine phosphatase, non-receptor type 22 (lymphoid) (PTPN22), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 10068674] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10068674] [evidence TAS]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 10068674] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16461343] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Lyp1; Lyp2; LYP; PEP; PTPN8	Lyp1; Lyp2; LYP; PEP; PTPN8
Homo sapiens	RefSeq	NM_012411.2	ILMN_25877	PTPN22	NM_012411.2	NM_012411.2		26191	15619017	NM_012411.2	PTPN22	NP_036543.2	ILMN_1780108	0003870021	I	2134	TTCTCTTGGCTTTAGATGACATTTAGCCCTAAGATTGGAAGAATGGTTCG	1	-	114177197-114177232:114177233-114177246	1p13.2b	Homo sapiens protein tyrosine phosphatase, non-receptor type 22 (lymphoid) (PTPN22), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 10068674] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10068674] [evidence TAS]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 10068674] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16461343] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Lyp1; Lyp2; LYP; PEP; PTPN8	Lyp1; Lyp2; LYP; PEP; PTPN8
Homo sapiens	RefSeq	NM_022094.2	ILMN_10779	CIDEC	NM_022094.2	NM_022094.2		63924	23943903	NM_022094.2	CIDEC	NP_071377.2	ILMN_1779597	0003360020	S	445	CAGGGGATACAGTGTTCATGGTCCTCCAGAAGGGGCAGAAATGGCAGCCC	3	-	9911859-9911908	3p25.3c	Homo sapiens cell death-inducing DFFA-like effector c (CIDEC), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12429024] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12429024] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ20871; CIDE-3; Fsp27	FLJ20871; CIDE-3; Fsp27
Homo sapiens	RefSeq	NM_002029.3	ILMN_23433	FPR1	NM_002029.3	NM_002029.3		2357	36951095	NM_002029.3	FPR1	NP_002020.1	ILMN_2092118	0001030270	S	838	CAGCCTTTTTTCTCTGCTGGTCCCCATATCAGGTGGTGGCCCTTATAGCC	19	-	56941267-56941316	19q13.33e	Homo sapiens formyl peptide receptor 1 (FPR1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10823817] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10882119] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10823817] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 2161213] [evidence TAS]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 10857861] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10882119] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10857861] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10820279] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10823817] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 10889468] [evidence TAS]; A series of molecular signals mediated by the detection of nitric oxide (NO) [goid 7263] [pmid 10861041] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10857861] [evidence TAS]; Combining with an N-formyl peptide to initiate a change in cell activity [goid 4982] [pmid 12218158] [evidence IDA]	FPR; FMLP	FPR; FMLP
Homo sapiens	Unigene	Hs.530910	ILMN_101481	HS.530910	Hs.530910		Hs.530910		27827380	BX094949			ILMN_1838575	0001440390	S	98	TGGGGAAAAGCCTGCAGATATCCTGCTGCTTAACTGACAAGTGTGGTGAG	12	-	90061967-90062016		BX094949 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGp998F07269, mRNA sequence					
Homo sapiens	RefSeq	NM_198531.3	ILMN_180314	ATP9B	NM_198531.3	NM_198531.3		374868	41327759	NM_198531.3	ATP9B	NP_940933.3	ILMN_1658684	0002120209	S	4192	ATGTAATAAAATTGAGGCTCCACGGAGGCCCGTGTCCACATCAGCTGCAG	18	+	75239105-75239154	18q23d	Homo sapiens ATPase, class II, type 9B (ATP9B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of aminophospholipids into, out of, within or between cells. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group [goid 15917] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in) [goid 19829] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	MGC150651; DKFZp686H2093; FLJ46612; ATPIIB; HUSSY-20; ATPASEP; MGC150650; NEO1L; MGC61572	MGC150651; DKFZp686H2093; FLJ46612; ATPIIB; HUSSY-20; ATPASEP; MGC150650; NEO1L; MGC61572
Homo sapiens	RefSeq	NM_021939.2	ILMN_8804	FKBP10	NM_021939.2	NM_021939.2		60681	21361894	NM_021939.2	FKBP10	NP_068758.2	ILMN_1659905	0000060681	S	2272	CCTTCCTCCCCAATCCTGACTGGCTCCTAGGGAAGGGGAAGGCTCCTGGA	17	+	37232623-37232672	17q21.2b	Homo sapiens FK506 binding protein 10, 65 kDa (FKBP10), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FLJ22041; hFKBP65; FKBP65	FLJ22041; hFKBP65; FKBP65
Homo sapiens	RefSeq	NM_178830.2	ILMN_11163	C19ORF47	NM_178830.2	NM_178830.2		126526	31341376	NM_178830.2	C19orf47	NP_849152.1	ILMN_1735608	0004230603	S	1806	CATTTCTCTTCTGTTTTCTGTCCCCGTGGCAAGGCCCGACTGTCCGCTGC	19	-	45519080-45519129	19q13.2b	Homo sapiens chromosome 19 open reading frame 47 (C19orf47), mRNA.				FLJ36888; DKFZp686P05129	FLJ36888; DKFZp686P05129
Homo sapiens	RefSeq	NM_017675.3	ILMN_11659	PCDH24	NM_017675.3	NM_017675.3		54825	73486659	NM_017675.3	PCDH24	NP_060145.2	ILMN_1718173	0004590692	S	3843	CAGTCAGGAAATCAAGGAGCACAGGCCACCACACACACCACCAGAGCCAG	5	+	175952372-175952387:175955139-175955172	5q35.2d	Homo sapiens protocadherin 24 (PCDH24), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12117771] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 12117771] [evidence IDA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 12117771] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12117771] [evidence IPI]	FLJ20383; MGC163154; FLJ20124	MGC163154; FLJ20383; FLJ20124
Homo sapiens	RefSeq	NM_080610.1	ILMN_5649	CST9L	NM_080610.1	NM_080610.1		128821	18104939	NM_080610.1	CST9L	NP_542177.1	ILMN_1720485	0001170075	S	716	GCTGCTCCCACATTCCGTGGACATCAGCACTACTCTCCTGAGGACTCTTC	20	-	23493505-23493554	20p11.21b	Homo sapiens cystatin 9-like (mouse) (CST9L), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]	bA218C14.1	bA218C14.1
Homo sapiens	RefSeq	NM_032602.1	ILMN_18514	GJA10	NM_032602.1	NM_032602.1		84694	14211940	NM_032602.1	GJA10	NP_115991.1	ILMN_2200210	0003370551	S	1259	TAGACAGATCTCGCCCAGGCAGTCGCAAGGCCAGCTTTCTGTCCAGATTG	6	+	90605446-90605495	6q15d	Homo sapiens gap junction protein, alpha 10, 62kDa (GJA10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]; The biosynthesis of a synapse [goid 7416] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence IEA]; The series of events involved in visual perception in which a sensory light stimulus is received by a cell and converted into a molecular signal [goid 50908] [evidence IEA]	A wide pore channel activity that enables a direct cytoplasmic connection from one cell to an adjacent cell. The gap junction can pass large solutes as well as electrical signals between cells. Gap junctions consist of two gap junction hemi-channels, or connexons, one contributed by each membrane through which the gap junction passes [goid 5243] [evidence IEA]	CX62; RP11-63K6.6	CX62; RP11-63K6.6
Homo sapiens	RefSeq	XM_001715434.1	ILMN_340260	LOC100131580	XM_001715434.1	XM_001715434.1		100131580	169207416	XM_001715434.1	LOC100131580	XP_001715486.1	ILMN_3282061	0004150088	M	407	AGCAGTATCGGAAGTCAGCATCATCTACTCAGCAGCCCAAATCTGGAAGG				14q31.1a	PREDICTED: Homo sapiens similar to hCG2042489 (LOC100131580), mRNA.					
Homo sapiens	RefSeq	NM_014041.2	ILMN_25938	SPCS1	NM_014041.2	NM_014041.2		28972	66472393	NM_014041.2	SPCS1	NP_054760.2	ILMN_1665280	0001300497	S	598	TCCTCCATGGCCCATCTATCGCCGGCATCCTCTCAAGTGGTTACCTGTTC	3	+	52716751-52716800	3p21.1d	Homo sapiens signal peptidase complex subunit 1 homolog (S. cerevisiae) (SPCS1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A multi subunit protease complex located in the endoplasmic reticulum membrane that cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space [goid 5787] [pmid 8632014] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 8632014] [evidence IDA]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8632014] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 8632014] [evidence ND ]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	YJR010C-A; HSPC033; SPC12; SPC1	YJR010C-A; HSPC033; SPC12; SPC1
Homo sapiens	RefSeq	XM_944968.1	ILMN_37120	FLJ20209	XM_944968.1	XM_944968.1		57245	88969026	XM_944968.1	FLJ20209	XP_950061.1	ILMN_1719386	0005690129	A	3799	AAGGAAGGCTGGGGTGAGGGGGCATTTTACTTGCACAGAGGCTGACCCTG					PREDICTED: Homo sapiens hypothetical protein FLJ20209 (FLJ20209), mRNA.					
Homo sapiens	RefSeq	XM_928961.1	ILMN_46329	ZBTB34	XM_928961.1	XM_928961.1		403341	89029996	XM_928961.1	ZBTB34	XP_934054.1	ILMN_1696961	0003850719	I	3	GATCTGGAAGTCAGTGGACATCTTGGGACTGTTTGGAGAGACAGGCTCCC	9	+	128659580-128659629	9q33.3b	PREDICTED: Homo sapiens zinc finger and BTB domain containing 34 (ZBTB34), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_001129774.2	ILMN_180770	LOC650157	XM_001129774.2	XM_001129774.2		650157	169163386	XM_001129774.2	LOC650157	XP_001129774.2	ILMN_3287493	0006550377	M	278	TACGTCCTGGCATCTTGTCCATGGCAAAAGCTGGACCCAACACGAATGGC	2	+	11409481-11409530	2p25.1b	PREDICTED: Homo sapiens similar to TRIM5/CypA fusion protein (LOC650157), mRNA.					
Homo sapiens	RefSeq	NM_000297.2	ILMN_20368	PKD2	NM_000297.2	NM_000297.2		5311	33286447	NM_000297.2	PKD2	NP_000288.1	ILMN_1807300	0005360687	S	4488	GTCAGTCCAATCTCCAATGAGAACATGAGCAAATAGACCTTTCCAGGTTG	4	+	88998361-88998410	4q22.1b	Homo sapiens polycystic kidney disease 2 (autosomal dominant) (PKD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10770959] [evidence TAS]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [pmid 15337773] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10760273] [evidence IPI]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8650545] [evidence TAS]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [pmid 8650545] [evidence TAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 10760273] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9171830] [evidence TAS]; The series of events by which a mechanical stimulus is received by a cell and converted into a molecular signal [goid 50982] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [pmid 8650545] [evidence TAS]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 8650545] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8650545] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9171830] [evidence TAS]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [pmid 10760273] [evidence TAS]	PC2; PKD4; APKD2; MGC138468; MGC138466	PKD4; PC2; APKD2; MGC138468; MGC138466
Homo sapiens	RefSeq	XM_927997.1	ILMN_31162	LOC643338	XM_938980.2	XM_938980.2		643338	113425557	XM_938980.2	LOC643338	XP_944073.1	ILMN_1653829	0004220678	S	26	GCCACTCATCAGAGTCCGGGAGCCACTGGCAGAGAGGGCACGGCCCCACA				15q15.1b	PREDICTED: Homo sapiens hypothetical LOC643338 (LOC643338), mRNA.					
Homo sapiens	RefSeq	XM_932275.1	ILMN_44751	LOC644635	XM_932275.1	XM_932275.1		644635	89035570	XM_932275.1	LOC644635	XP_937368.1	ILMN_1737777	0000450725	S	283	GGGAAAATGGGAGAGGAGCTAGGGGAGAGTAGCCGAGCGCCGAAAGATTC	12	-	54687377-54687426		PREDICTED: Homo sapiens hypothetical protein LOC644635 (LOC644635), mRNA.					
Homo sapiens	RefSeq	XM_937547.1	ILMN_40462	LOC648496	XM_937547.1	XM_937547.1		648496	89047418	XM_937547.1	LOC648496	XP_942640.1	ILMN_1754970	0005490110	S	3891	GGACTGGCCAAAACAAATCTGAGCCAACTATGGTCCATACCAGCTGACAC					PREDICTED: Homo sapiens hypothetical protein LOC648496 (LOC648496), mRNA.					
Homo sapiens	RefSeq	NM_001803.2	ILMN_24971	CD52	NM_001803.2	NM_001803.2		1043	68342029	NM_001803.2	CD52	NP_001794.2	ILMN_2208903	0000020129	S	177	AACGACACCAGCCAAACCAGCAGCCCCTCAGCATCCAGCAACATAAGCGG	1	+	26519273-26519322	1p36.11b	Homo sapiens CD52 molecule (CD52), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 1711975] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1711975] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 8223854] [evidence IDA]; A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 45730] [pmid 8223854] [evidence NAS]		CDW52	CDW52
Homo sapiens	RefSeq	NM_017780.2	ILMN_29669	CHD7	NM_017780.2	NM_017780.2		55636	54112402	NM_017780.2	CHD7	NP_060250.2	ILMN_1677376	0001580487	S	10088	GGGAGGGTTCTTGCCAGACAGAACTACAGTTCCATTGTCTCGTGGTCTTG	8	+	61778806-61778855	8q12.2a	Homo sapiens chromodomain helicase DNA binding protein 7 (CHD7), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure [goid 30540] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity) [goid 43584] [evidence IEA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ20361; KIAA1416; FLJ20357; IS3	FLJ20361; KIAA1416; FLJ20357; IS3
Homo sapiens	RefSeq	NM_005432.2	ILMN_306740	XRCC3	NM_001100118.1	NM_001100118.1		7517	153946426	NM_001100118.1	XRCC3	NP_001093588.1	ILMN_1696266	0000670014	S	2330	CCTTACATCTGGCTGGAAAGCAGAGCCTCCTGGGAACACATCTGGCTGCA	14	-	104164119-104164168	14q32.33a	Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 3 (XRCC3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9660962] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 9660962] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]		
Homo sapiens	RefSeq	NM_015443.2	ILMN_12615	KIAA1267	NM_015443.2	NM_015443.2		284058	41152088	NM_015443.2	KIAA1267	NP_056258.1	ILMN_2200636	0001580338	S	4785	CCTGCTTTGGAGCTGTGTAATGGCAGCGAAACATGTAGCTGTCTTTGTTC	17	-	44107410-44107459	17q21.31e	Homo sapiens KIAA1267 (KIAA1267), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	MGC102843; DKFZP727C091; DKFZp686P06109	MGC102843; DKFZp686P06109; DKFZP727C091
Homo sapiens	RefSeq	NM_015443.2	ILMN_12615	KIAA1267	NM_015443.2	NM_015443.2		284058	41152088	NM_015443.2	KIAA1267	NP_056258.1	ILMN_1678235	0001850079	S	4364	GCTCCCCTTGCCTGTGGAACATTGTCTGGTCCTAGCTGTGGTTCCCATTG	17	-	44107831-44107880	17q21.31e	Homo sapiens KIAA1267 (KIAA1267), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	MGC102843; DKFZP727C091; DKFZp686P06109	MGC102843; DKFZp686P06109; DKFZP727C091
Homo sapiens	RefSeq	NM_001831.2	ILMN_15290	CLU	NM_001831.2	NM_001831.2		1191	42716296	NM_001831.2	CLU	NP_001822.2	ILMN_1667058	0004610176	I	4	TCCGCGGCATTCTTTGGGCGTGAGTCATGCAGGTTTGCAGCCAGCCCCAA	8	-	27528191-27528215:27528216-27528240	8p21.1e	Homo sapiens clusterin (CLU), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 14718574] [evidence NAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 2387851] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]	SP-40; MGC24903; CLI; APOJ; SGP-2; TRPM-2; AAG4; TRPM2; KUB1; SGP2	SP-40; MGC24903; CLI; APOJ; SGP-2; TRPM-2; AAG4; TRPM2; KUB1; SGP2
Homo sapiens	RefSeq	NM_003426.1	ILMN_168517	ZNF74	NR_003253.1	NR_003253.1		7625	116875832	NR_003253.1	ZNF74		ILMN_1802146	0002190736	S	2437	CCTCCTCTAGTTAAAGTCAGTCACCTCCCCAGAAGGGCCACACTCCAGGA	22	+	19091407-19091456	22q11.21d	Homo sapiens zinc finger protein 74 (ZNF74), transcript variant 2, transcribed RNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1639391] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1639391] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp520; ZNF520; Cos52	Zfp520; ZNF520; Cos52
Homo sapiens	RefSeq	XM_929940.1	ILMN_32093	LOC646971	XM_929940.1	XM_929940.1		646971	89047178	XM_929940.1	LOC646971	XP_935033.1	ILMN_1656722	0006980402	S	167	ACCTCCAGACACAAACAGGGCACTTAGAGGCCCAGATAAACATCCTGGAA	18	+	39316571-39316620		PREDICTED: Homo sapiens hypothetical protein LOC646971 (LOC646971), mRNA.					
Homo sapiens	RefSeq	NM_138960.3	ILMN_178272	TGIF2LX	NM_138960.3	NM_138960.3		90316	34328940	NM_138960.3	TGIF2LX	NP_620410.3	ILMN_3237497	0005560373	S	397	TAGAAACGACCCCATCATTGGCCACAAAACGGGCAAAGATGCCCATGCCA	X	+	89064088-89064137	Xq21.31c	Homo sapiens TGFB-induced factor homeobox 2-like, X-linked (TGIF2LX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	TGIFLX; MGC34726	TGIFLX; MGC34726
Homo sapiens	RefSeq	NM_016302.2	ILMN_11665	CRBN	NM_016302.2	NM_016302.2		51185	39545579	NM_016302.2	CRBN	NP_057386.2	ILMN_1668582	0003610630	S	1153	CAGCTGGTTTCCTGGGTATGCCTGGACTGTTGCCCAGTGTAAGATCTGTG	3	-	3194190-3194239	3p26.3a	Homo sapiens cereblon (CRBN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]	MGC27358; DKFZp781K0715; MRT2A	MGC27358; DKFZp781K0715; MRT2A
Homo sapiens	RefSeq	NM_016302.2	ILMN_11665	CRBN	NM_016302.2	NM_016302.2		51185	39545579	NM_016302.2	CRBN	NP_057386.2	ILMN_2225735	0003780554	S	2087	GGGAAAAGATGCCAAAACATGTCCCCTCACCCAGGCTAAACTTGATACTG	3	-	3191953-3192002	3p26.3a	Homo sapiens cereblon (CRBN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]	MGC27358; DKFZp781K0715; MRT2A	MGC27358; DKFZp781K0715; MRT2A
Homo sapiens	RefSeq	XM_001721609.1	ILMN_348911	LOC100133184	XM_001721609.1	XM_001721609.1		100133184	169172922	XM_001721609.1	LOC100133184	XP_001721661.1	ILMN_3246688	0005340039	S	177	TTGCGCAGGCCGCCCTATTCCGCGCCCTCAGGGCGTCAGTATCAGCCTGA	8	+	12010871-12010920	8p23.1a	PREDICTED: Homo sapiens similar to hCG1990697 (LOC100133184), mRNA.					
Homo sapiens	RefSeq	NM_007100.2	ILMN_14284	ATP5I	NM_007100.2	NM_007100.2		521	51479154	NM_007100.2	ATP5I	NP_009031.1	ILMN_1772506	0004560246	I	15	AGGCTTTGCTGGCTTGTGCGGCATCCTGCTCCGTCTGCAGGTTGTGCTTC	4	-	668058-668107	4p16.3d	Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E (ATP5I), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 12110673] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12110673] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	MGC12532; ATP5K	MGC12532; ATP5K
Homo sapiens	RefSeq	NM_007100.2	ILMN_14284	ATP5I	NM_007100.2	NM_007100.2		521	51479154	NM_007100.2	ATP5I	NP_009031.1	ILMN_1726603	0001580603	A	293	GTGAGTGACCCTGCGACCCACTCTTTGGACCAGCAGCGGATGAATAAAGC	4	-	666242-666288:666289-666291	4p16.3d	Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E (ATP5I), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 12110673] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12110673] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	MGC12532; ATP5K	MGC12532; ATP5K
Homo sapiens	RefSeq	NM_001013670.1	ILMN_15604	LOC400464	NM_001013670.1	NM_001013670.1		400464	61966786	NM_001013670.1	LOC400464	NP_001013692.1	ILMN_2320480	0005260605	A	1188	CCGCGCGCTGCTGTGTTCTGGAAGGGCTCATTGTACAGTCAAGGCGGCAG	15	+	98165981-98166030	15q26.3b	Homo sapiens similar to FLJ43276 protein (LOC400464), mRNA.					
Homo sapiens	RefSeq	NM_001013670.1	ILMN_15604	LOC400464	NM_001013670.1	NM_001013670.1		400464	61966786	NM_001013670.1	LOC400464	NP_001013692.1	ILMN_1786168	0005870020	I	1668	GTTTGGACCTGGGCGTCTGAGGGCCCCACTTTGGGAACCGTTGAAATAGG	15	+	98171131-98171180	15q26.3b	Homo sapiens similar to FLJ43276 protein (LOC400464), mRNA.					
Homo sapiens	RefSeq	XM_928233.1	ILMN_34461	LOC645196	XM_928233.1	XM_928233.1		645196	89033822	XM_928233.1	LOC645196	XP_933326.1	ILMN_1721940	0004920427	S	3	GGATGACTTTGAAGGGATCAAGACTTCATTGGAGGAGGTAACTGCAGATG	11	-	16452300-16452349		PREDICTED: Homo sapiens hypothetical protein LOC645196 (LOC645196), mRNA.					
Homo sapiens	RefSeq	NM_006888.2	ILMN_37438	CALM1	NM_006888.3	NM_006888.3		801	87196336	NM_006888.3	CALM1	NP_008819.1	ILMN_1778242	0001660477	S	3889	TGCTGTCTGTATCCCTTGGAGTAAGAAGGTAGTGGCATGGGTGGAGTGTG	14	+	89944051-89944100	14q32.11a	Homo sapiens calmodulin 1 (phosphorylase kinase, delta) (CALM1), mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [pmid 16760425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10899953] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 16760425] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9580552] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9188442] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10781589] [evidence EXP]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [pmid 16760425] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10899953] [evidence TAS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10899953] [evidence TAS]; Any process that modulates the frequency, rate or extent of the division of the cytoplasm of a cell and its separation into two daughter cells [goid 32465] [pmid 16760425] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43388] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9681195] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 2223880] [evidence TAS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]; Interacting selectively with the N-terminus of a protein that has the potential to be, or has been, modified by N-terminal myristoylation. Binding affinity is typically altered by myristoylation; for example, N-terminal myristoylation of HIV Nef increases its affinity for calmodulin [goid 31997] [pmid 15632291] [evidence IPI]	PHKD; CALML2; CAMI; DD132	CALML2; PHKD; CAMI; DD132
Homo sapiens	RefSeq	XM_930304.1	ILMN_308405	SFTPA1	NM_001093770.1	NM_001093770.1		653509	147903069	NM_001093770.1	SFTPA1	NP_001087239.1	ILMN_1678533	0000450246	A	931	GGAATAAGATACTTGTTGCTGTCACAGTTATTACCATCCCCCCAGCTACC	10	+	81044828-81044877	10q22.3e	Homo sapiens surfactant protein A1 (SFTPA1), mRNA. XM_934600	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; Any process that modulates the surface tension of a liquid. Surface tension is the property that makes a liquid behave as if it had an elastic skin on its surface at the interface with a gas or an immiscible liquid [goid 50828] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [pmid 2995821] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	SFTP1; COLEC4; SP-A1; SP-A	
Homo sapiens	RefSeq	XM_945467.1	ILMN_42261	HSPA12A	XM_945467.1	XM_945467.1		259217	89033595	XM_945467.1	HSPA12A	XP_950560.1	ILMN_1760110	0005870019	I	875	TGAGGGTAGAGTCAGGGCGGGTGGAAGCCGGAGGAGAAGGACTCAAGATG				10q25.3b	PREDICTED: Homo sapiens heat shock 70kDa protein 12A, transcript variant 4 (HSPA12A), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	XM_941708.1	ILMN_38779	LOC652290	XM_941708.1	XM_941708.1		652290	89070802	XM_941708.1	LOC652290	XP_946801.1	ILMN_1729992	0001440131	S	1	ATGTGTGCAAGACTGGACAAGCAGGGCCATGTGACCGGGGGGATCTTCTC					PREDICTED: Homo sapiens similar to zinc finger, DHHC domain containing 11 (LOC652290), mRNA.					
Homo sapiens	RefSeq	XM_944869.1	ILMN_306720	MYO15B	NR_003587.1	NR_003587.1		80022	149944587	NR_003587.1	MYO15B		ILMN_1651563	0000610343	S	258	GAAAGCCCAGGAGAGGCAAAGCAACGCGCAGCGTCAGGGACGCGGGCCCA	17	+	71095991-71096040	17q25.1c	Homo sapiens myosin XVB pseudogene (MYO15B) on chromosome 17. XM_944869 XR_015465 XR_017826 XR_017827 XR_017828 XR_017903	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MYO15BP; FLJ22686; FLJ21606; FLJ44494; FLJ40577	
Homo sapiens	RefSeq	NM_016494.3	ILMN_14220	RNF181	NM_016494.3	NM_016494.3		51255	75709223	NM_016494.3	RNF181	NP_057578.1	ILMN_1655340	0003440338	S	405	GAGCTGCCCACTGATGACGACACTTATGAGGAGCACAGACGAGATAAGGC	2	+	85677765-85677812:85678079-85678080	2p11.2f	Homo sapiens ring finger protein 181 (RNF181), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSPC238	HSPC238
Homo sapiens	RefSeq	NM_174899.3	ILMN_18820	FBXO36	NM_174899.4	NM_174899.4		130888	111185921	NM_174899.4	FBXO36	NP_777559.3	ILMN_1756358	0000650242	S	783	TCTGAGGTCAAATCATGGCCCGAGGACAAGGGCTGTAAGACAGGGAGCCC	2	+	230584037-230584086	2q36.3e	Homo sapiens F-box protein 36 (FBXO36), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		Fbx36; FLJ37592; FLJ41090	Fbx36; FLJ37592
Homo sapiens	RefSeq	XM_001725721.1	ILMN_343076	LOC100131927	XM_001725721.1	XM_001725721.1		100131927	169214761	XM_001725721.1	LOC100131927	XP_001725773.1	ILMN_3242137	0000360468	S	181	AAAGACCTCTCCTTGGACCTATTGCTTACCAGAAAGAAAAGGTCCCAAGG					PREDICTED: Homo sapiens similar to chromosome 20 open reading frame 78 (LOC100131927), mRNA.					
Homo sapiens	RefSeq	NM_004546.2	ILMN_20348	NDUFB2	NM_004546.2	NM_004546.2		4708	33519465	NM_004546.2	NDUFB2	NP_004537.1	ILMN_2117330	0004150687	S	210	AGCTGACCAGATCCCAGGTGTTCCAGAGCGAGTTCTTCAGCGGACTCATG	7	+	140049182-140049231	7q34c-q34d	Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa (NDUFB2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	AGGG; MGC70788; CI-AGGG	AGGG; MGC70788; CI-AGGG
Homo sapiens	RefSeq	NM_016609.3	ILMN_10076	SLC22A17	NM_016609.3	NM_016609.3		51310	63999575	NM_016609.3	SLC22A17	NP_057693.3	ILMN_1653200	0004010367	A	2173	CACCCTGCCTCCTCCCTGCTGCTTTGCATTCACTTCCTTGGCCAGAGTCA	14	-	23815660-23815709	14q11.2f	Homo sapiens solute carrier family 22, member 17 (SLC22A17), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	BOIT; BOCT; hBOIT; NGALR	BOIT; BOCT; NGALR; hBOIT
Homo sapiens	RefSeq	NM_203384.1	ILMN_28630	RNH1	NM_203385.1	NM_203385.1		6050	42822873	NM_203385.1	RNH1	NP_976319.1	ILMN_1660880	0001690209	A	1596	GGTCCTGTACGACATTTACTGGTCTGAGGAGATGGAGGACCGGCTGCAGG	11	-	495048-495053:496609-496652	11p15.5d	Homo sapiens ribonuclease/angiogenin inhibitor 1 (RNH1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable heterodimer of angiogenin and placental ribonuclease inhibitor; interaction between angiogenin and PRI prevents angiogenin binding to its receptor to stimulate angiogenesis [goid 32311] [pmid 3470787] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [pmid 2081593] [evidence NAS]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [pmid 3470787] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2742853] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 3064806] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 3470787] [evidence IPI]; Stops, prevents or reduces the activity of a ribonuclease, any enzyme that catalyzes the hydrolysis of phosphodiester bonds in chains of RNA [goid 8428] [pmid 3470787] [evidence IDA]	MGC54054; RAI; MGC4569; MGC18200; RNH	MGC54054; RAI; MGC4569; MGC18200; RNH
Homo sapiens	RefSeq	NM_203385.1	ILMN_28630	RNH1	NM_203385.1	NM_203385.1		6050	42822873	NM_203385.1	RNH1	NP_976319.1	ILMN_2375599	0000020427	A	1400	AGCCTGGCTCTGTGCTGCGGGTGCTCTGGTTGGCCGACTGCGATGTGAGT	11	-	496799-496821:497971-497997	11p15.5d	Homo sapiens ribonuclease/angiogenin inhibitor 1 (RNH1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable heterodimer of angiogenin and placental ribonuclease inhibitor; interaction between angiogenin and PRI prevents angiogenin binding to its receptor to stimulate angiogenesis [goid 32311] [pmid 3470787] [evidence IPI]	The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [pmid 2081593] [evidence NAS]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [pmid 3470787] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2742853] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 3064806] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 3470787] [evidence IPI]; Stops, prevents or reduces the activity of a ribonuclease, any enzyme that catalyzes the hydrolysis of phosphodiester bonds in chains of RNA [goid 8428] [pmid 3470787] [evidence IDA]	MGC54054; RAI; MGC4569; MGC18200; RNH	MGC54054; RAI; MGC4569; MGC18200; RNH
Homo sapiens	RefSeq	NM_001013358.1	ILMN_11858	OR9G9	NM_001013358.1	NM_001013358.1		504191	61656207	NM_001013358.1	OR9G9	NP_001013376.1	ILMN_1750510	0000730538	S	827	TTTATACTGAGGTACTCCCCATGTTGAATCCCATGATCTACAGCCTAAGG	11	+	56468690-56468739		Homo sapiens olfactory receptor, family 9, subfamily G, member 9 (OR9G9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	Unigene	Hs.538460	ILMN_103914	HS.538460	Hs.538460		Hs.538460		31941553	BX482037			ILMN_1857588	0006130500	S	499	TAAATCTGTCTGGATACAAGCAATCCCTACCTGCCACTGGGAAACTTAGG	10	-	63621323-63621372		DKFZp686K23228_r1 686 (synonym: hlcc3) Homo sapiens cDNA clone DKFZp686K23228 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001080529.1	ILMN_162155	WIPF3	NM_001080529.1	NM_001080529.1		644150	122937495	NM_001080529.1	WIPF3	NP_001073998.1	ILMN_2161971	0003440730	S	264	CACACGAGGCGCGAGCACACCTCCCACCCTGGGAGATCTGTTTGCTGGTG	7	+	29885190-29885239	7p15.1c-p15.1b	Homo sapiens WAS/WASL interacting protein family, member 3 (WIPF3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	FLJ36931; CR16	FLJ36931; CR16
Homo sapiens	RefSeq	NM_019035.2	ILMN_13687	PCDH18	NM_019035.2	NM_019035.2		54510	38788468	NM_019035.2	PCDH18	NP_061908.1	ILMN_1799026	0006480753	S	4456	AATGTTTCCTGACTCCCAGGCCCCTACTATTCCAGGCCATCACACTGGCC	4	-	138660922-138660971	4q28.3i	Homo sapiens protocadherin 18 (PCDH18), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	KIAA1562; DKFZP434B0923; PCDH68L	DKFZP434B0923; PCDH68L; KIAA1562
Homo sapiens	RefSeq	NM_032623.3	ILMN_7551	C4ORF49	NM_032623.3	NM_032623.3		84709	117168278	NM_032623.3	C4orf49	NP_116012.2	ILMN_2072101	0003830608	S	863	AAGCCAGTGTTGGCTCTGAGGCTGCTTCGGCTCAAGGCTAATCTCCAGCC	4	-	140407193-140407202:140407203-140407242	4q31.1c	Homo sapiens chromosome 4 open reading frame 49 (C4orf49), mRNA.				MGC125827; MGC125828	MGC125827; MGC125828
Homo sapiens	RefSeq	NM_032623.3	ILMN_7551	C4ORF49	NM_032623.3	NM_032623.3		84709	117168278	NM_032623.3	C4orf49	NP_116012.2	ILMN_3236160	0004040669	S	698	CTGAAACAACCCCAGAGGTTACAAATGCTGCCCTGGATGAAGCTGTCACC	4	-	140407358-140407407	4q31.1c	Homo sapiens chromosome 4 open reading frame 49 (C4orf49), mRNA.				MGC125827; MGC125828	MGC125827; MGC125828
Homo sapiens	Unigene	Hs.550111	ILMN_110168	HS.550111	Hs.550111		Hs.550111		9868920	AV647906			ILMN_1880784	0005690494	S	411	TGGAGTTCTTCCAGTCGTGGTGGCTGGGCTTGCTATCATTTATGGCTGGG	1	+	184660533-184660582		AV647906 GLC Homo sapiens cDNA clone GLCBDC04 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001726582.1	ILMN_344738	LOC100131693	XM_001726582.1	XM_001726582.1		100131693	169210991	XM_001726582.1	LOC100131693	XP_001726634.1	ILMN_3210464	0001070026	A	1610	AGTGTACAAAACTGTAAATAAAATGTGTACAGTGAATTGTCTTTAAAAAA	17	-	44855648-44855697	17q21.33a	PREDICTED: Homo sapiens similar to hCG1777996 (LOC100131693), mRNA.					
Homo sapiens	RefSeq	XM_931948.1	ILMN_35513	ATP13A3	XM_931948.1	XM_931948.1		79572	88967173	XM_931948.1	ATP13A3	XP_937041.1	ILMN_1768895	0000840672	I	1498	GCACACTTAACCTGCTTCGTCAGAGGGTACTTGGCATCACCGGTGCACAG	3	-	195652506-195652555	3q29c	PREDICTED: Homo sapiens ATPase type 13A3, transcript variant 2 (ATP13A3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]		
Homo sapiens	Unigene	Hs.555247	ILMN_112232	HS.555247	Hs.555247		Hs.555247		19027606	BM714348			ILMN_1838375	0003440470	S	539	CCAAAAAACACCCTCAGCAGAAAATGAGAGGGCAGGAAGGATGTCAGCAG	9	+	137951465-137951514		UI-E-EJ0-ahr-o-19-0-UI.r1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahr-o-19-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001008743.1	ILMN_178110	SULT1C3	NM_001008743.1	NM_001008743.1		442038	56847625	NM_001008743.1	SULT1C3	NP_001008743.1	ILMN_1653463	0005870470	S	738	GACCAACTATACCACTTTGCCCACCAGCATTATGGACCACTCCATCTCCC	2	+	108247829-108247878	2q12.3c	Homo sapiens sulfotransferase family, cytosolic, 1C, member 3 (SULT1C3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_927821.1	ILMN_39252	LOC644725	XM_927821.1	XM_927821.1		644725	89036850	XM_927821.1	LOC644725	XP_932914.1	ILMN_1728172	0007510066	S	888	TGAGGGGCTACAAGTCTCAAAAAGAAAGCTTCAGTATGTAGAGCCCGAAG	13	+	110419499-110419548		PREDICTED: Homo sapiens similar to Gamma-tubulin complex component 3 (GCP-3) (Spindle pole body protein Spc98 homolog) (hSpc98) (hGCP3) (h104p) (LOC644725), mRNA.					
Homo sapiens	RefSeq	NM_003105.3	ILMN_162864	SORL1	NM_003105.3	NM_003105.3		6653	18379347	NM_003105.3	SORL1	NP_003096.1	ILMN_2060115	0002480274	S	6532	CTGCTGTGGTGGTGCCCATCTTATTCCTGATACTGCTGAGCCTGGGGGTG	11	+	121003520-121003569	11q24.1a	Homo sapiens sortilin-related receptor, L(DLR class) A repeats-containing (SORL1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9157966] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 9157966] [evidence TAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9157966] [evidence TAS]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [pmid 17326667] [evidence IPI]	LR11; LRP9; SORLA; SorLA-1; gp250	LRP9; LR11; SORLA; SorLA-1; gp250
Homo sapiens	RefSeq	NM_003105.3	ILMN_162864	SORL1	NM_003105.3	NM_003105.3		6653	18379347	NM_003105.3	SORL1	NP_003096.1	ILMN_1759818	0006940039	S	6071	ATCCCGTAACAGCACTGTGGAATACACCCTTAACAAGTTGGAGCCTGGCG	11	+	120997043-120997092	11q24.1a	Homo sapiens sortilin-related receptor, L(DLR class) A repeats-containing (SORL1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9157966] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 9157966] [evidence TAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9157966] [evidence TAS]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [pmid 17326667] [evidence IPI]	LR11; LRP9; SORLA; SorLA-1; gp250	LRP9; LR11; SORLA; SorLA-1; gp250
Homo sapiens	RefSeq	NM_020740.1	ILMN_3388	ANKFY1	NM_020740.2	NM_020740.2		51479	110815805	NM_020740.2	ANKFY1	NP_065791.1	ILMN_1801464	0006220152	I	1638	TAATGCGGCGACTCGCAGACTCTTTGGACTCAAGAATTCCTTTGACCGTC	17	-	4098043-4098092	17p13.2c	Homo sapiens ankyrin repeat and FYVE domain containing 1 (ANKFY1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1255; DKFZp686M19106; ANKHZN; ZFYVE14	KIAA1255; DKFZp686M19106; ZFYVE14; ANKHZN
Homo sapiens	RefSeq	NM_014736.4	ILMN_2026	KIAA0101	NM_014736.4	NM_014736.4		9768	71773764	NM_014736.4	KIAA0101	NP_055551.1	ILMN_2285996	0005090754	I	276	AGGAGGGAACCCCGTTTGCGTGCGCCCAACTCCCAAGTGGCAAAAAGGAA	15	-	64669038-64669087	15q22.31a	Homo sapiens KIAA0101 (KIAA0101), transcript variant 1, mRNA.				L5; p15(PAF); OEATC1; OEATC-1; NS5ATP9	L5; p15(PAF); OEATC1; OEATC-1; NS5ATP9
Homo sapiens	RefSeq	NM_001007531.1	ILMN_165575	NKAPL	NM_001007531.1	NM_001007531.1		222698	56090619	NM_001007531.1	NKAPL	NP_001007532.1	ILMN_1797408	0004010403	S	817	CTCAGAAGAGGACTTGTCAGAAGCTACCTGGATGGAGCAGCCAAATGTGG	6	+	28227914-28227963	6p22.1b	Homo sapiens NFKB activating protein-like (NKAPL), mRNA.				MGC126730; bA424I5.1; MGC126734	MGC126730; C6orf194; bA424I5.1; MGC126734
Homo sapiens	RefSeq	NM_001007531.1	ILMN_165575	NKAPL	NM_001007531.1	NM_001007531.1		222698	56090619	NM_001007531.1	NKAPL	NP_001007532.1	ILMN_2153581	0000610653	S	1182	GACGAAAGAGAGAAAGTAAGATTTTAGCCAGTTTCCGAGAGATGGTGCAC	6	+	28228279-28228328	6p22.1b	Homo sapiens NFKB activating protein-like (NKAPL), mRNA.				MGC126730; bA424I5.1; MGC126734	MGC126730; bA424I5.1; MGC126734
Homo sapiens	RefSeq	NM_194458.1	ILMN_14421	UBE2J2	NM_194458.1	NM_194458.1		118424	37577131	NM_194458.1	UBE2J2	NP_919440.1	ILMN_1671362	0002630291	I	390	TGGGCGAGCCTGGTGCCCCAGTCATGGCATTGGCAAGGTGCTCCTGCACC	1	-	1203122-1203171	1p36.33a	Homo sapiens ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) (UBE2J2), transcript variant 3, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	NCUBE2; PRO2121	NCUBE2; PRO2121
Homo sapiens	RefSeq	NM_052998.2	ILMN_793	ADC	NM_052998.2	NM_052998.2		113451	31543358	NM_052998.2	ADC	NP_443724.1	ILMN_1659599	0000130707	S	2086	ACCCCCGCGCTCCACCTGCAGTGTTTCTGCCCTGTAAATAGGACCAGTCT	1	+	33358486-33358535	1p35.1a	Homo sapiens arginine decarboxylase (ADC), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis [goid 6591] [evidence IEA]; The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups [goid 6596] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 11587527] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: L-arginine = agmatine + CO2 [goid 8792] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Upregulation of the activity of the enzyme ornithine decarboxylase [goid 42978] [evidence IEA]	ODC1L; AZI2; ODC-p; KIAA1945	ODC1L; KIAA1945; AZI2; ODC-p
Homo sapiens	RefSeq	XM_496947.4	ILMN_41262	FAM90A5	XM_496947.4	XM_496947.4		441315	169172776	XM_496947.4	FAM90A5	XP_496947.1	ILMN_3241066	0003140220	S	909	CTTCCCCAAGAAACCGAGACTGGGTCCCTTCCAGATCCCCGAAAGCGCCA	8	+	7134848-7134897	8p23.1f	PREDICTED: Homo sapiens family with sequence similarity 90, member A5 (FAM90A5), mRNA.					
Homo sapiens	RefSeq	XR_038062.1	ILMN_349757	LOC100134703	XR_038062.1	XR_038062.1		100134703	169170363	XR_038062.1	LOC100134703		ILMN_3247283	0005130025	S	986	GATCTGTCACTTTCTCCCATCACGCTCAGGTAGGACCATCCAGTTGCAGA	7	+	45886242-45886291		PREDICTED: Homo sapiens misc_RNA (LOC100134703), partial miscRNA.					
Homo sapiens	RefSeq	NM_018449.2	ILMN_17739	UBAP2	NM_018449.2	NM_018449.2		55833	22325363	NM_018449.2	UBAP2	NP_060919.2	ILMN_1716157	0005490097	A	3550	CAGTGCCCTTTCCTAGAATTCCCGACATGTGTCAGCCATGCCTCTGTGGG	9	-	33934503-33934552	9p13.3d	Homo sapiens ubiquitin associated protein 2 (UBAP2), mRNA.				FLJ22435; KIAA1491; FLJ46567; bA176F3.5; FLJ43947	FLJ22435; KIAA1491; FLJ46567; bA176F3.5; FLJ43947
Homo sapiens	RefSeq	NM_001005472.1	ILMN_307648	LOC388524	NR_003662.1	NR_003662.1		388524	153792237	NR_003662.1	LOC388524		ILMN_1667114	0000460050	S	58	AGCCTCTGTTGACCTATGATCTGCAGGGAGACGCACAGCCAGGACATCCT				19p12b	Homo sapiens ribosomal protein SA pseudogene (LOC388524) on chromosome 19.					
Homo sapiens	Unigene	Hs.122288	ILMN_75849	HS.122288	Hs.122288		Hs.122288		2841259	AA781928			ILMN_1892495	0004040402	S	334	GCGGTGTGTTATCCCTCTCCAACGAGCAAAAGCTAATGGAGGACAGGCAG	2	+	105944803-105944852		ai78b04.s1 Soares_testis_NHT Homo sapiens cDNA clone 1376911 3, mRNA sequence					
Homo sapiens	Unigene	Hs.545009	ILMN_108305	HS.545009	Hs.545009		Hs.545009		6040471	AW085319			ILMN_1902278	0000110133	S	219	TTTTTTCTTTGCGGCTCAGGCACAAAGCTTCAGCACACAGCCTCCGGGGG	7	+	55285541-55285590		xe08f12.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2606543 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000869.2	ILMN_6982	HTR3A	NM_000869.2	NM_000869.2		3359	47519823	NM_000869.2	HTR3A	NP_000860.1	ILMN_2371079	0002640731	A	1973	ACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAACCCC	11	+	113366093-113366142	11q23.2a	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3A (HTR3A), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7565620] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 7565620] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 7565620] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence NAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence NAS];  [goid 5232] [pmid 7565620] [evidence TAS]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	5HT3R; HTR3; 5-HT3R; 5-HT3A; 5-HT-3	5HT3R; HTR3; 5-HT3R; 5-HT3A; 5-HT-3
Homo sapiens	RefSeq	NM_000869.2	ILMN_6982	HTR3A	NM_000869.2	NM_000869.2		3359	47519823	NM_000869.2	HTR3A	NP_000860.1	ILMN_1662070	0006840128	A	1778	GGCCCTTACACCCTTGTCCCACCCCCAGCAGCTCACCATGGCTTTAAAAC	11	+	113365898-113365947	11q23.2a	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3A (HTR3A), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7565620] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 7565620] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 7565620] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence NAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence NAS];  [goid 5232] [pmid 7565620] [evidence TAS]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	5HT3R; HTR3; 5-HT3R; 5-HT3A; 5-HT-3	5HT3R; HTR3; 5-HT3R; 5-HT3A; 5-HT-3
Homo sapiens	RefSeq	NM_007068.2	ILMN_167637	DMC1	NM_007068.2	NM_007068.2		11144	23238218	NM_007068.2	DMC1	NP_008999.2	ILMN_2162367	0005670435	S	1995	CAAGTGCAGTGGCATGTGCTTGTAATCCCAGCTACTCTGGAGGCTGAGGC	22	-	38915178-38915227	22q13.1b-q13.1c	Homo sapiens DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) (DMC1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 8602360] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 8602360] [evidence TAS]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 8602360] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8590282] [evidence TAS]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [pmid 8602360] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8602360] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8602360] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	DMC1H; HsLim15; dJ199H16.1; MGC150473; MGC150472; LIM15	DMC1H; HsLim15; dJ199H16.1; MGC150473; MGC150472; LIM15
Homo sapiens	RefSeq	NM_005094.2	ILMN_170097	SLC27A4	NM_005094.2	NM_005094.2		10999	40807356	NM_005094.2	SLC27A4	NP_005085.2	ILMN_1655039	0001510044	S	2883	CTATGAGGGGAGGAGGAATGGGAGAGGGGGCTCAGGGGCCAATAAACTCT	9	+	130163258-130163307	9q34.11b	Homo sapiens solute carrier family 27 (fatty acid transporter), member 4 (SLC27A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9878842] [evidence TAS]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [pmid 9878842] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Enables the directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15245] [pmid 9878842] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	ACSVL4; FATP4	ACSVL4; FATP4
Homo sapiens	RefSeq	NM_181885.1	ILMN_16937	RXFP4	NM_181885.2	NM_181885.2		339403	111548672	NM_181885.2	RXFP4	NP_871001.1	ILMN_1806099	0003870692	S	1036	GTGCAACAGGTGGCCCTAAAGCAGGTAGGCAGGCGGTGGGTCGCAAGCAA	1	+	154179139-154179188	1q22c	Homo sapiens relaxin/insulin-like family peptide receptor 4 (RXFP4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [evidence IEA]	RLN3R2; GPCR142; MGC126558; MGC126556; GPR100	GPCR142; MGC126558; MGC126556; GPR100
Homo sapiens	RefSeq	NM_003950.2	ILMN_43570	F2RL3	NM_003950.2	NM_003950.2		9002	89353782	NM_003950.2	F2RL3	NP_003941.2	ILMN_2127298	0006250139	S	2517	CATGTGGCGGCAGAGGCAGAGATGGGAGTGATGCGGACGGACACAAACTA	19	+	16863616-16863665	19p13.11e	Homo sapiens coagulation factor II (thrombin) receptor-like 3 (F2RL3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1851174] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10477691] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9618465] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9618465] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9618465] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10702240] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 9618465] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 10500152] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 9618465] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with thrombin to initiate a change in cell activity [goid 15057] [pmid 10500152] [evidence TAS]	PAR4	PAR4
Homo sapiens	RefSeq	NM_004425.2	ILMN_6103	ECM1	NM_004425.2	NM_004425.2		1893	12707564	NM_004425.2	ECM1	NP_004416.1	ILMN_1658333	0003440386	I	1134	AGTTCCAGCGCTGCTGCCGCCAGGGGAACAATCACACCTGTACATGGAAG	1	+	148750879-148750928	1q21.2b	Homo sapiens extracellular matrix protein 1 (ECM1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 9367673] [evidence TAS]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]		
Homo sapiens	RefSeq	NM_016083.3	ILMN_22819	CNR1	NM_016083.3	NM_016083.3		1268	38683843	NM_016083.3	CNR1	NP_057167.2	ILMN_1813581	0004010152	A	5015	CTGTACTAGGCCTACTGGGGATCAGAGTTCCCAAGAAAGGAAACCTTTTC	6	-	88906711-88906760	6q15b	Homo sapiens cannabinoid receptor 1 (brain) (CNR1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1718258] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1718258] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 1718258] [evidence TAS]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [pmid 1718258] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with cannabinoids to initiate a change in cell activity [goid 4949] [pmid 1718258] [evidence TAS]	CNR; CANN6; CB1A; CB1; CB1K5; CB-R	CNR; CANN6; CB1A; CB1; CB1K5; CB-R
Homo sapiens	RefSeq	XM_933896.1	ILMN_43665	LOC651614	XM_944799.2	XM_944799.2		651614	113415286	XM_944799.2	LOC651614	XP_949892.2	ILMN_1710570	0003780703	S	195	CGCCCGCGTGGCTGTCGGGTTTCGAACCCCAGGGCCGACTCTAGTACTCG					PREDICTED: Homo sapiens hypothetical LOC651614 (LOC651614), mRNA.					
Homo sapiens	RefSeq	NM_024060.2	ILMN_28759	AHNAK	NM_001620.1	NM_001620.1		79026	61743953	NM_001620.1	AHNAK	NP_001611.1	ILMN_1792495	0002810482	A	594	GACCTGGACCCGTGAAGTCTTCAGCTCCTGCAGCTCTGAAGTGGTTCTGA	11	-	62301545-62301546:62302475-62302522	11q12.3a	Homo sapiens AHNAK nucleoprotein (AHNAK), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1608957] [evidence NAS]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC5395; AHNAKRS	MGC5395; AHNAKRS
Homo sapiens	RefSeq	NM_001620.1	ILMN_28759	AHNAK	NM_001620.1	NM_001620.1		79026	61743953	NM_001620.1	AHNAK	NP_001611.1	ILMN_1714567	0000450553	I	18592	GCAAATTGTCCAACCCACCCCCTCAACATGAGGGGCTTCCATTTTCTGTG	11	-	62283547-62283596	11q12.3a	Homo sapiens AHNAK nucleoprotein (AHNAK), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1608957] [evidence NAS]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC5395; AHNAKRS	MGC5395; AHNAKRS
Homo sapiens	RefSeq	NM_001358.2	ILMN_1256	DHX15	NM_001358.2	NM_001358.2		1665	68509925	NM_001358.2	DHX15	NP_001349.2	ILMN_1754839	0004590333	S	2481	CCCACAGTGTGAAGCAAAGAGACAGTTGGACCGCATCATTGCCAAACTTC	4	-	24529572-24529621	4p15.2d	Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 15 (DHX15), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9388478] [evidence TAS]; The minor (U12-dependent) spliceosome is composed of the snRNPs, U11, U12, U4atac, U6atac, and U5 (which is also a component of the major spliceosome). This minor form of the spliceosome is responsible for the splicing of the majority of introns with atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site [goid 5689] [pmid 15146077] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 7935475] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 15146077] [evidence IC ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a RNA helix [goid 3724] [pmid 7935475] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	DDX15; PRPF43; HRH2; DBP1; PRP43; PrPp43p	DDX15; PRPF43; HRH2; DBP1; PRP43; PrPp43p
Homo sapiens	RefSeq	NM_001358.2	ILMN_1256	DHX15	NM_001358.2	NM_001358.2		1665	68509925	NM_001358.2	DHX15	NP_001349.2	ILMN_2168449	0002900735	S	2724	TATGCCTCCCTTTTGTGTTGACACTGTAGCTCATACTGGAAAAGTCGATC	4	-	24529329-24529378	4p15.2d	Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 15 (DHX15), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9388478] [evidence TAS]; The minor (U12-dependent) spliceosome is composed of the snRNPs, U11, U12, U4atac, U6atac, and U5 (which is also a component of the major spliceosome). This minor form of the spliceosome is responsible for the splicing of the majority of introns with atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site [goid 5689] [pmid 15146077] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 7935475] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 15146077] [evidence IC ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a RNA helix [goid 3724] [pmid 7935475] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	DDX15; PRPF43; HRH2; DBP1; PRP43; PrPp43p	DDX15; PRPF43; HRH2; DBP1; PRP43; PrPp43p
Homo sapiens	RefSeq	NM_024690.2	ILMN_1949	MUC16	NM_024690.2	NM_024690.2		94025	83367076	NM_024690.2	MUC16	NP_078966.2	ILMN_2125346	0002490070	S	43709	ACCTGGAGGATCTGCAATGACTGGAACTTGCCGGTGCCTGGGGTGCCTTT	19	-	8959577-8959607:8959608-8959626	19p13.2d	Homo sapiens mucin 16, cell surface associated (MUC16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [pmid 12766047] [evidence IDA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 14676194] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14676194] [evidence IPI]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]	CA125; FLJ14303	FLJ14303; CA125
Homo sapiens	Unigene	Hs.444587	ILMN_92797	HS.444587	Hs.444587		Hs.444587		4971943	AI694603			ILMN_1827930	0001820102	S	80	AGCGGTTGATGATTGTCAGGGGTCAGTGGACCTGGGGTCAGTCTACCAGG	3	+	195243472-195243521		wd88g11.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2338724 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001740.2	ILMN_16786	CALB2	NM_007088.2	NM_007088.2		794	153946406	NM_007088.2	CALB2	NP_009019.1	ILMN_1748840	0005860039	A	1201	GCCAATGGTGTAGCTGTCCTCTCAGAACTCCTGTGTGTGGAAGGCACCCG	16	+	69981678-69981727	16q22.3a	Homo sapiens calbindin 2 (CALB2), transcript variant CALB2c, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CAL2	CAL2
Homo sapiens	RefSeq	NM_152545.1	ILMN_29132	RASGEF1B	NM_152545.1	NM_152545.1		153020	22749128	NM_152545.1	RASGEF1B	NP_689758.1	ILMN_1796677	0004890100	S	2034	CCCCCCGTTTAGATCCCAAACCTTAGCTCAACCAGTATTGCCAGAGAGGG	4	-	82567428-82567477	4q21.21c-q21.22a	Homo sapiens RasGEF domain family, member 1B (RASGEF1B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	GPIG4; FLJ31695; MGC46251	GPIG4; FLJ31695; MGC46251
Homo sapiens	RefSeq	NM_005312.2	ILMN_2480	RAPGEF1	NM_005312.2	NM_005312.2		2889	38373674	NM_005312.2	RAPGEF1	NP_005303.2	ILMN_1695282	0001340414	I	5	TCCCTTTTCTGGGCACCGCCTTCTGCTAGGGGGTTGTAGATGAAAGTGCC	9	-	134612871-134612920	9q34.13a	Homo sapiens Rap guanine nucleotide exchange factor (GEF) 1 (RAPGEF1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7806500] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16284401] [evidence EXP]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 7512734] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9748234] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	DKFZp781P1719; C3G; GRF2	DKFZp781P1719; C3G; GRF2
Homo sapiens	RefSeq	NM_001640.3	ILMN_27694	APEH	NM_001640.3	NM_001640.3		327	23510450	NM_001640.3	APEH	NP_001631.3	ILMN_1718023	0000450475	S	2557	CATGAATGCTGTGCTCTGGCTACGCACACACTTGGGCAGCTGAAGCCCTG	3	+	49695737-49695779:49695780-49695786	3p21.31c	Homo sapiens N-acylaminoacyl-peptide hydrolase (APEH), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2006156] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	D3S48E; APH; ACPH; OPH; MGC2178; DNF15S2; D3F15S2	D3S48E; APH; ACPH; OPH; MGC2178; DNF15S2; D3F15S2
Homo sapiens	Unigene	Hs.505141	ILMN_97543	HS.505141	Hs.505141		Hs.505141		37182726	AY358804			ILMN_1891705	0007650671	S	1	GGCACGAGGTGGAAGGGCTTTTACAAACAGATTGCTGGCCCCACCCCCCA	12	+	31039965-31040014		Homo sapiens clone DNA100312 VSSW1971 (UNQ1971) mRNA, complete cds					
Homo sapiens	RefSeq	XM_946280.1	ILMN_138072	FOXK2	XM_946280.1	XM_946280.1		3607	89043062	XM_946280.1	FOXK2	XP_951373.1	ILMN_1784341	0006660474	I	1060	CACAAGGAGGACTGGCCTGTGCCGGAAGCTGGAGATGGTGGGGTCCTGAT				17q25.3h	PREDICTED: Homo sapiens forkhead box K2, transcript variant 6 (FOXK2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1909027] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1909027] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 16624804] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12402362] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 1909027] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 12402362] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 1339390] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 16624804] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 1909027] [evidence IDA]		
Homo sapiens	RefSeq	NM_001135924.1	ILMN_370725	VWDE	NM_001135924.1	NM_001135924.1		221806	209571554	NM_001135924.1	VWDE	NP_001129396.1	ILMN_3240451	0000130725	S	1527	TGGTCAAGGTAGAGAGCACCTAGGCTTAAATTTGGCACTGTCTTCCTGTC	7	-	12414811-12414853:12417402-12417408	7p21.3a	Homo sapiens von Willebrand factor D and EGF domains (VWDE), mRNA.					
Homo sapiens	RefSeq	XM_929883.1	ILMN_44444	LOC339742	XM_929883.2	XM_929883.2		339742	113413265	XM_929883.2	LOC339742	XP_934976.2	ILMN_1658363	0004570167	I	1045	GATCTCTCTTCGGAGGAGAAGAGGGGCGGAGTCACGGCCAGGCGGGCCCT	2	+	132827665-132827714	2q21.2a	PREDICTED: Homo sapiens hypothetical protein LOC339742 (LOC339742), mRNA.					
Homo sapiens	RefSeq	XM_929581.1	ILMN_43237	LOC646638	XM_929581.1	XM_929581.1		646638	89040538	XM_929581.1	LOC646638	XP_934674.1	ILMN_1714821	0002640747	S	245	CCCACAGGATGGAGACTTTTGTGTCTGGCTTCCTTCACTTCGCAGCAGGC	16	-	86774603-86774652		PREDICTED: Homo sapiens hypothetical protein LOC646638 (LOC646638), mRNA.					
Homo sapiens	RefSeq	NM_004484.2	ILMN_24093	GPC3	NM_004484.2	NM_004484.2		2719	5360213	NM_004484.2	GPC3	NP_004475.1	ILMN_2051972	0001340593	S	1813	GGCAACTCCGAAGGACAACGAGATAAGCACCTTTCACAACCTCGGGAACG	X	-	132497888-132497937	Xq26.2b	Homo sapiens glypican 3 (GPC3), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7657705] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Branching of the ureteric bud [goid 1658] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8589713] [evidence TAS]		OCI-5; SGBS; DGSX; SDYS; SGBS1; SGB	OCI-5; SGBS; DGSX; SDYS; SGBS1; SGB
Homo sapiens	RefSeq	XM_929819.1	ILMN_44858	LOC646861	XM_929819.1	XM_929819.1		646861	88943593	XM_929819.1	LOC646861	XP_934912.1	ILMN_1679437	0003400402	S	267	GGGTCGGACCGAGCTGAATGACACAATACAAGAATTTCACGATGCAACCA	1	-	171382742-171382791		PREDICTED: Homo sapiens hypothetical protein LOC646861 (LOC646861), mRNA.					
Homo sapiens	RefSeq	NM_007200.3	ILMN_28017	AKAP13	NM_007200.3	NM_007200.3		11214	31563331	NM_007200.3	AKAP13	NP_009131.2	ILMN_2396956	0003940440	A	12972	GATCCGCAGGAGGGTGGTTGGGATACACCGGATACCTCTGCTCTCATTGC	15	+	84093272-84093321	15q25.3a-q25.3b	Homo sapiens A kinase (PRKA) anchor protein 13 (AKAP13), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9891067] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [pmid 1618839] [evidence NAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8290273] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16301118] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HA-3; FLJ11952; BRX; FLJ43341; c-lbc; PROTO-LB; Ht31; LBC; AKAP-Lbc; PROTO-LBC	HA-3; FLJ11952; BRX; FLJ43341; c-lbc; PROTO-LB; Ht31; LBC; AKAP-Lbc; PROTO-LBC
Homo sapiens	RefSeq	NM_001012971.2	ILMN_8448	C20ORF106	NM_001012971.2	NM_001012971.2		200232	71043621	NM_001012971.2	C20orf106	NP_001012989.2	ILMN_1744235	0002850653	S	9	AACATGATGGCCTCTCCCAGCAAAGCTCCAGGGTTGGAAAGAGTCCCCTG	20	+	54532963-54533012	20q13.31a	Homo sapiens chromosome 20 open reading frame 106 (C20orf106), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC104272; dJ1153D9.3	MGC104272; dJ1153D9.3
Homo sapiens	RefSeq	NM_001012971.2	ILMN_8448	C20ORF106	NM_001012971.2	NM_001012971.2		200232	71043621	NM_001012971.2	C20orf106	NP_001012989.2	ILMN_2198270	0001500343	S	634	CCCCCAACAAAGACTGTGCATTCAATACCTTAATGGAACTCGAGGTGGAG	20	+	54534334-54534383	20q13.31a	Homo sapiens chromosome 20 open reading frame 106 (C20orf106), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC104272; dJ1153D9.3	MGC104272; dJ1153D9.3
Homo sapiens	RefSeq	NM_207330.1	ILMN_15363	NIPAL1	NM_207330.1	NM_207330.1		152519	46409301	NM_207330.1	NIPAL1	NP_997213.1	ILMN_1811593	0000160703	S	2122	CCACGGGTGCTTTGTTCTTCCTTCTGCACCTCCTTCTTAAACTAGATAGC	4	+	47733769-47733818	4p12a	Homo sapiens NIPA-like domain containing 1 (NIPAL1), mRNA.				DKFZp686A06115	DKFZp686A06115
Homo sapiens	RefSeq	NM_001080541.1	ILMN_179390	MGA	NM_001080541.1	NM_001080541.1		23269	122937387	NM_001080541.1	MGA	NP_001074010.1	ILMN_2372379	0003190364	A	11884	GGTGAAGTTGAGTGAGAGGAGTTGAGGAACGTGGAAGACAGTGAGCTCTC	15	+	39849128-39849177	15q15.1c	Homo sapiens MAX gene associated (MGA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	MAD5; MXD5; FLJ12634; KIAA0518	MAD5; MXD5; FLJ12634; KIAA0518
Homo sapiens	RefSeq	NM_001080541.1	ILMN_179390	MGA	NM_001080541.1	NM_001080541.1		23269	122937387	NM_001080541.1	MGA	NP_001074010.1	ILMN_2372384	0004780605	A	9193	TGCAGAGCCCGAAAGTGTGTCCTCACCCCCCACCCTACACATGAAGACTG	15	+	39846437-39846486	15q15.1c	Homo sapiens MAX gene associated (MGA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	MAD5; MXD5; FLJ12634; KIAA0518	MAD5; MXD5; FLJ12634; KIAA0518
Homo sapiens	Unigene	Hs.374903	ILMN_88428	HS.374903	Hs.374903		Hs.374903		23538821	BU685158			ILMN_1889708	0002630736	S	375	AGGCCCCATGCAAAATGCTGCCGGGCATGTATAAAAAGGATCTACACATG	11	+	105380539-105380588		UI-CF-EN1-adc-l-06-0-UI.s1 UI-CF-EN1 Homo sapiens cDNA clone UI-CF-EN1-adc-l-06-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_932293.1	ILMN_35832	LOC653507	XM_932293.1	XM_932293.1		653507	89059760	XM_932293.1	LOC653507	XP_937386.1	ILMN_1768107	0006580341	S	16	AACCGGCTCCGGAGCGAGAACGCGCCCGCTTATGAGAATATGAAACTAAG	X	+	52943136-52943160:52944442-52944455:52944456-52944466		PREDICTED: Homo sapiens similar to transmembrane protein 29 (LOC653507), mRNA.					
Homo sapiens	RefSeq	NM_174912.2	ILMN_14285	FAAH2	NM_174912.2	NM_174912.2		158584	30410024	NM_174912.2	FAAH2	NP_777572.1	ILMN_1679158	0000130167	S	1687	TTTGGGGGCTGGGTCTGTCCAGGAAAGTTTTAGGAGGACCTTCTGCAAGG	X	+	57532058-57532090:57532091-57532107	Xp11.1b	Homo sapiens fatty acid amide hydrolase 2 (FAAH2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	FAAH-2; RP11-479E16.1; AMDD; FLJ31204; RP11-479E16	FAAH-2; RP11-479E16.1; AMDD; FLJ31204; RP11-479E16
Homo sapiens	RefSeq	NM_205548.1	ILMN_15000	FAM151B	NM_205548.1	NM_205548.1		167555	45387930	NM_205548.1	FAM151B	NP_991111.1	ILMN_1811450	0000070358	S	1427	CACAGGGGTCAGCAGCTGTCTCATATCAAGATCTATTAATCCATTTCCTG	5	+	79837810-79837859	5q14.1e	Homo sapiens family with sequence similarity 151, member B (FAM151B), mRNA.				UNQ9217	UNQ9217
Homo sapiens	RefSeq	NM_001903.2	ILMN_14691	CTNNA1	NM_001903.2	NM_001903.2		1495	55770843	NM_001903.2	CTNNA1	NP_001894.2	ILMN_1804854	0003890017	S	3228	CCTGTGGTAAGCAACCTGGGCATCTTAGGAAGCAGTCCCTGGAGAAGGCA	5	+	138260394-138260399:138260945-138260988	5q31.2d	Homo sapiens catenin (cadherin-associated protein), alpha 1, 102kDa (CTNNA1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IEA]; Cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells [goid 5915] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8323564] [evidence NAS]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents [goid 43297] [pmid 9700171] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of smoothened signaling [goid 45880] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12477722] [evidence IPI]; Interacting selectively with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane [goid 17166] [pmid 9700171] [evidence IPI]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IEA]	CAP102; FLJ36832	FLJ36832; CAP102
Homo sapiens	RefSeq	XM_941898.1	ILMN_33820	KIAA0514	XM_941898.1	XM_941898.1		9721	89071497	XM_941898.1	KIAA0514	XP_946991.1	ILMN_1723505	0004830408	A	260	TGCTCGGTGTGGCCATCCAGAAGCACCTGGAGATGCAGTTTGAGCAGCTG				10q11.22a	PREDICTED: Homo sapiens KIAA0514 (KIAA0514), mRNA.					
Homo sapiens	RefSeq	NM_014169.2	ILMN_19959	CHMP4A	NM_014169.2	NM_014169.2		29082	40548421	NM_014169.2	CHMP4A	NP_054888.2	ILMN_1715607	0000460468	S	1401	AGCCCTTGGGCTCCCTTCTCTTTGATAGCAGTTATAATGCCCTTGTTCCC	14	-	24678841-24678890	14q12a	Homo sapiens chromatin modifying protein 4A (CHMP4A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17350572] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	SNF7-1; C14orf123; SNF7; MGC142095; Shax2; CHMP4B; MGC142093; HSPC134	SNF7; MGC142095; HSPC134; SNF7-1; C14orf123; Shax2; CHMP4B; MGC142093
Homo sapiens	RefSeq	NM_001010893.1	ILMN_13121	SLC10A5	NM_001010893.2	NM_001010893.2		347051	111607478	NM_001010893.2	SLC10A5	NP_001010893.1	ILMN_1737323	0005860296	S	1130	GTTTCTTAGCTCTTGCCGTTATTCAGCTGTCTTTTCCACAGTCCAAGGCC	8	-	82768583-82768632	8q21.13c	Homo sapiens solute carrier family 10 (sodium/bile acid cotransporter family), member 5 (SLC10A5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	P5	P5
Homo sapiens	RefSeq	NM_005634.2	ILMN_16823	SOX3	NM_005634.2	NM_005634.2		6658	30061555	NM_005634.2	SOX3	NP_005625.2	ILMN_1653055	0003310037	S	1842	GCCAATGTTAATTTATAGCCAGGTGTGCGTGTGTCTCCCGCCTCGCCGCC	X	-	139585334-139585383	Xq27.1c	Homo sapiens SRY (sex determining region Y)-box 3 (SOX3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8625802] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8625802] [evidence TAS]	SOXB; MRGH	SOXB; MRGH
Homo sapiens	RefSeq	Hs.569517	ILMN_14520	AGBL1	NM_152336.2	NM_152336.2		123624	120444923	NM_152336.2	AGBL1	NP_689549.2	ILMN_1887648	0005340681	S	184	AGCAGCCGGAAGAGAGGCAGGAGGATGTCATAGTCTGGAGGAGCTGTCCT	15	+	84488060-84488080:84498665-84498693	15q25.3b-q25.3c	Homo sapiens ATP/GTP binding protein-like 1 (AGBL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC149239; FLJ32310	
Homo sapiens	RefSeq	NM_152336.2	ILMN_14520	AGBL1	NM_152336.2	NM_152336.2		123624	120444923	NM_152336.2	AGBL1	NP_689549.2	ILMN_2100055	0000990220	S	2591	CCTCTACCACCTGAGCAGCATTGGCCGAAGTCCCGTGGTTTTCTGTGACT	15	+	84867138-84867174:84890237-84890249	15q25.3b-q25.3c	Homo sapiens ATP/GTP binding protein-like 1 (AGBL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC149239; FLJ32310	
Homo sapiens	RefSeq	NM_003116.1	ILMN_15424	SPAG4	NM_003116.1	NM_003116.1		6676	11037054	NM_003116.1	SPAG4	NP_003107.1	ILMN_1684620	0001190670	S	1046	ATTGCTGGGCTTTTGAAGGCGACCAAGGCCAGGTGGTGATCCAACTGCCG	20	+	33670934-33670983	20q11.22b	Homo sapiens sperm associated antigen 4 (SPAG4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9691178] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9691178] [evidence TAS]		
Homo sapiens	RefSeq	NM_022574.2	ILMN_13201	GIGYF1	NM_022574.3	NM_022574.3		64599	92087054	NM_022574.3	GIGYF1	NP_072096.2	ILMN_1815639	0006450020	S	4222	AGGGGCGGGGTCCCCAGCACTTGTTACAAACACACGATGCACCTTAACTC	7	-	100117123-100117172	7q22.1c	Homo sapiens GRB10 interacting GYF protein 1 (GIGYF1), mRNA.		The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GYF1; PERQ1; GIGYF1	AF053356-CDS2; GIGYF1
Homo sapiens	RefSeq	NM_173663.3	ILMN_28353	FAM153A	NM_173663.3	NM_173663.3		285596	123701921	NM_173663.3	FAM153A	NP_775934.3	ILMN_2295387	0001400669	I	1406	TCCTTGTCACACAAGCGAGCAGCCCACCCGACCCAGTATTGCAGGCCAGC	5	-	177150703-177150752	5q35.3a-q35.3b	Homo sapiens family with sequence similarity 153, member A (FAM153A), mRNA. XM_944945 XM_944947				KIAA0752; NY-REN-7	KIAA0752
Homo sapiens	RefSeq	XM_932135.1	ILMN_28353	FAM153A	NM_173663.3	NM_173663.3		285596	123701921	NM_173663.3	FAM153A	NP_775934.3	ILMN_1663518	0004050367	I	1688	CAAACCCTTGAAGACATTTCAGGGCCATGCTCACTTGGGAGGGTTTGAGG	5	-	177150421-177150470	5q35.3a-q35.3b	Homo sapiens family with sequence similarity 153, member A (FAM153A), mRNA. XM_944945 XM_944947				KIAA0752; NY-REN-7	
Homo sapiens	RefSeq	XM_001713938.1	ILMN_340911	LOC647506	XM_001713938.1	XM_001713938.1		647506	169164256	XM_001713938.1	LOC647506	XP_001713990.1	ILMN_3240375	0003800021	S	92	CTGCCATGTCTGCATCTGTAGGAGACAGAGTCACCATCACTTGTCGGGCG					PREDICTED: Homo sapiens hypothetical LOC647506 (LOC647506), mRNA.					
Homo sapiens	RefSeq	NM_000859.1	ILMN_165658	HMGCR	NM_000859.1	NM_000859.1		3156	4557642	NM_000859.1	HMGCR	NP_000850.1	ILMN_1657395	0006550603	S	3983	CTTGGATGGACCCACGAACGCTCTTAGCTTTCTCAGGGGGTCAGCAGAGT	5	+	74693189-74693238	5q13.3b	Homo sapiens 3-hydroxy-3-methylglutaryl-Coenzyme A reductase (HMGCR), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10698924] [evidence EXP]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 2991281] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [pmid 9853754] [evidence TAS]; The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones [goid 8406] [pmid 9853754] [evidence TAS]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The chemical reactions and pathways involving coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15936] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (R)-mevalonate + CoA + 2 NADP+ = (S)-3-hydroxy-3-methylglutaryl-CoA + 2 NADPH + 2 H+ [goid 4420] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]		
Homo sapiens	RefSeq	NM_001009931.1	ILMN_13749	HRNR	NM_001009931.1	NM_001009931.1		388697	57864581	NM_001009931.1	HRNR	NP_001009931.1	ILMN_1687510	0005570484	S	4239	GTGGCCGACATGGGTCTGGCTCAGGTCAGTCTTCTGGATTTGGTCACCAC	1	-	152189892-152189941	1q21.3b	Homo sapiens hornerin (HRNR), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	S100A16; S100a18	S100A16; S100a18
Homo sapiens	RefSeq	NM_015705.4	ILMN_180247	SGSM3	NM_015705.4	NM_015705.4		27352	55953121	NM_015705.4	SGSM3	NP_056520.2	ILMN_1679614	0000270475	S	2569	ATCAATATCAGGCTGCCCCACTCCACGTTCCCCAGCACATCCCAGGTGGT	22	+	39135819-39135868	22q13.1e	Homo sapiens small G protein signaling modulator 3 (SGSM3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rap family of proteins switching to a GTP-bound active state [goid 32486] [pmid 17509819] [evidence IEP]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17509819] [evidence IPI]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [pmid 17509819] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	MAP; DKFZp761D051; RUTBC3; RUSC3	MAP; DKFZp761D051; RUSC3
Homo sapiens	RefSeq	NM_173574.1	ILMN_174658	ZNF683	NM_173574.2	NM_173574.2		257101	148727314	NM_173574.2	ZNF683	NP_775845.2	ILMN_1678238	0007650451	S	1543	AGTGTCCTCGACATCCCAGGGGAAAGCAAGAGCAGTGAGCCTGAGCAGTG	1	-	26688182-26688231	1p36.11b	Homo sapiens zinc finger protein 683 (ZNF683), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC33414; RP11-569G9.6	MGC33414; RP11-569G9.6
Homo sapiens	RefSeq	NM_017653.2	ILMN_6843	DYM	NM_017653.2	NM_017653.2		54808	27886627	NM_017653.2	DYM	NP_060123.2	ILMN_1680130	0005340373	S	2285	CCCCTATGTCTGGTCTCTTGTCTACAACTCAGCAGTCGGCCTGTACTGGA	18	-	44824463-44824512	18q21.1e-q21.1f	Homo sapiens dymeclin (DYM), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DMC; SMC; FLJ90130; FLJ20071	DMC; SMC; FLJ90130; FLJ20071
Homo sapiens	RefSeq	XM_939725.1	ILMN_34477	LOC654127	XM_939725.2	XM_939725.2		654127	113427505	XM_939725.2	LOC654127	XP_944818.1	ILMN_1725294	0006560086	S	1420	TCCCTTTGAGAGTCTGAAGGATGATGGGCCGTCACCCCAGGAAAATTTGC					PREDICTED: Homo sapiens similar to adaptor-related protein complex 1 sigma 2 subunit (LOC654127), mRNA.					
Homo sapiens	RefSeq	NM_018159.2	ILMN_163686	NUDT11	NM_018159.2	NM_018159.2		55190	37221176	NM_018159.2	NUDT11	NP_060629.2	ILMN_2189668	0007560100	S	2012	GTGACACTCTTCCTCATGATACCAGTGAAATGTATTGATTGTGTCCCCAG	X	-	51249937-51249986	Xp11.22c	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 11 (NUDT11), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphospho-myo-inositol polyphosphate + H2O = myo-inositol polyphosphate + phosphate [goid 8486] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	FLJ10628; DIPP3beta; DIPP3b; ASP1; hDIPP3beta	FLJ10628; DIPP3beta; DIPP3b; ASP1; hDIPP3beta
Homo sapiens	RefSeq	NM_001033049.1	ILMN_4112	ADARB1	NM_001033049.1	NM_001033049.1		104	75709172	NM_001033049.1	ADARB1	NP_001028221.1	ILMN_1657442	0006520072	I	380	GGCCAATGAGCACACCCTCATTCATCCAGCGAGCATTGAGGACCCCCTAG	21	+	45379071-45379120	21q22.3e	Homo sapiens adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) (ADARB1), transcript variant 4, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8995285] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 9149227] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [pmid 9149227] [evidence IC ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9111310] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 8995285] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 8995285] [evidence IDA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 9149227] [evidence IDA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 9149227] [evidence IC ]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADAR2a; ADAR2; DRABA2; DRADA2; ADAR2a-L1; ADAR2a-L2; ADAR2g; ADAR2c; RED1; ADAR2a-L3; ADAR2b; ADAR2d	ADAR2a; ADAR2; DRABA2; DRADA2; ADAR2a-L1; ADAR2a-L2; ADAR2g; ADAR2c; RED1; ADAR2a-L3; ADAR2b; ADAR2d
Homo sapiens	RefSeq	XM_926586.1	ILMN_44261	LOC643226	XM_926586.1	XM_926586.1		643226	88985495	XM_926586.1	LOC643226	XP_931679.1	ILMN_1796611	0006590471	S	193	TATGGGTCTGGGGAAGTCCCCAGGCCCCAGATGTGCTCCCCTAAGCTGAC	5	-	145232482-145232531	5q32c	PREDICTED: Homo sapiens similar to glutaredoxin cysteine-rich 1 protein (LOC643226), mRNA.					
Homo sapiens	RefSeq	NM_139274.1	ILMN_9910	ACSS2	NM_139274.1	NM_139274.1		55902	21269871	NM_139274.1	ACSS2	NP_644803.1	ILMN_1742859	0005570059	I	49	AGCCAGTCTGTGAAATGATGGTGAGGTGGGCACTTCTTTGTGGTGAGTGC	20	+	32926550-32926599	20q11.22b	Homo sapiens acyl-CoA synthetase short-chain family member 2 (ACSS2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10843999] [evidence IC ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10843999] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [pmid 10843999] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [pmid 10843999] [evidence IDA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [pmid 10843999] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [pmid 10843999] [evidence IC ]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]	AceCS; ACAS2; ACS; DKFZp762G026; MYH7B; ACSA; dJ1161H23.1	AceCS; ACAS2; ACS; ACSA; dJ1161H23.1; DKFZp762G026; MYH7B
Homo sapiens	Unigene	Hs.313888	ILMN_85911	HS.313888	Hs.313888		Hs.313888		6505583	AW206109			ILMN_1817476	0000460224	S	436	AGAGCAACCTGCTATTGTGTCGCCAGCGTGTATCACCTCATCCGGCTCCC	10	-	89612515-89612564		UI-H-BI1-afx-g-06-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2723507 3, mRNA sequence					
Homo sapiens	RefSeq	XM_944211.1	ILMN_42466	LOC650475	XM_944211.1	XM_944211.1		650475	88999391	XM_944211.1	LOC650475	XP_949304.1	ILMN_1687943	0005490661	S	486	GTCCATTCATCCAAGTTGACAAGAAGAAACCTCAGGCGTGAAGACAGAAC					PREDICTED: Homo sapiens hypothetical protein LOC650475 (LOC650475), mRNA.					
Homo sapiens	RefSeq	NM_005080.2	ILMN_5293	XBP1	NM_005080.2	NM_005080.2		7494	14110394	NM_005080.2	XBP1	NP_005071.2	ILMN_1809433	0005690066	S	1352	GACCCCCAGGTATTGTCTTTTGACATCCAGCAGTCCAAGGTATTGAGACA	22	-	27520966-27521015	22q12.1c	Homo sapiens X-box binding protein 1 (XBP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1718857] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2321018] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1718857] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	TREB5; XBP2	TREB5; XBP2
Homo sapiens	Unigene	Hs.554965	ILMN_112156	HS.554965	Hs.554965		Hs.554965		5817165	AL110227			ILMN_1903565	0003060307	S	238	CTTCACCCATCAACGCTGTGCTTTGCCCACTGGACTCCTGAAGAgggggt	19	+	3072744-3072793		Homo sapiens mRNA; cDNA DKFZp434J194 (from clone DKFZp434J194)					
Homo sapiens	RefSeq	NM_003813.2	ILMN_29533	ADAM21	NM_003813.2	NM_003813.2		8747	15812182	NM_003813.2	ADAM21	NP_003804.1	ILMN_1812112	0002690368	S	1996	GGCTATGGGGGCAGTATTGACAGTGGCCCAGCATCTGCAAAGAGAGGAGT	14	+	69995965-69996014	14q24.2a	Homo sapiens ADAM metallopeptidase domain 21 (ADAM21), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [pmid 9469942] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADAM31; MGC125389	ADAM31; MGC125389
Homo sapiens	RefSeq	NM_152406.1	ILMN_25390	AFAP1L1	NM_152406.1	NM_152406.1		134265	55742688	NM_152406.1	AFAP1L1	NP_689619.1	ILMN_1694140	0000020154	S	3763	GCCTCTAATGACCAGCTGGGTGACCTTGGGAAAGTCACTTGATTGCTCTG	5	+	148701168-148701217	5q33.1b	Homo sapiens actin filament associated protein 1-like 1 (AFAP1L1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ36748; MGC149773	FLJ36748; MGC149773
Homo sapiens	RefSeq	NM_005336.2	ILMN_179293	HDLBP	NM_005336.3	NM_005336.3		3069	133908637	NM_005336.3	HDLBP	NP_005327.1	ILMN_1678252	0003060136	I	169	AGCGTAGCCTCTTCTCCTTTACCAAGATGGCGGCTTGTCCCTGTTTCGCC	2	-	242255036-242255085	2q37.3f	Homo sapiens high density lipoprotein binding protein (HDLBP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1318310] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 1318310] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [pmid 1318310] [evidence TAS]	HBP; VGL; FLJ16432; PRO2900	HBP; VGL
Homo sapiens	RefSeq	NM_005336.2	ILMN_179293	HDLBP	NM_005336.3	NM_005336.3		3069	133908637	NM_005336.3	HDLBP	NP_005327.1	ILMN_1756426	0004480246	A	4773	CAGGCAGTCCTGATTTTACCTGCCGTGGGGTCTGAAAGCACCAAGGGTCC	2	-	242168372-242168421	2q37.3f	Homo sapiens high density lipoprotein binding protein (HDLBP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1318310] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 1318310] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [pmid 1318310] [evidence TAS]	HBP; VGL; FLJ16432; PRO2900	HBP; VGL
Homo sapiens	RefSeq	XR_001037.1	ILMN_30680	LOC550112	XR_001037.1	XR_001037.1		550112	88974642	XR_001037.1	LOC550112		ILMN_1798472	0000830592	A	722	GGCAGAGCAGTGGCTTTGGCTGCTCAGCTGCTTGTACTTGTTACTTCTTG	4	+	68270117-68270166	4q13.2b	PREDICTED: Homo sapiens hypothetical LOC550112, transcript variant 8 (LOC550112), misc RNA.					
Homo sapiens	RefSeq	NR_003020.1	ILMN_171736	SNORA78	NR_003020.1	NR_003020.1		677844	92859602	NR_003020.1	SNORA78		ILMN_3244940	0003460450	S	2	TTGGTTGAAAATCGCCCCCGGCTTTGGCCGTGGCCGCGGGTGAGATTCGG	16	+	1955187-1955236	16p13.3e	Homo sapiens small nucleolar RNA, H/ACA box 78 (SNORA78), small nucleolar RNA.				ACA64	ACA64
Homo sapiens	RefSeq	XM_933846.1	ILMN_165086	LOC441034	XR_018917.1	XR_018917.1		441034	113416221	XR_018917.1	LOC441034		ILMN_1683498	0006550139	A	720	GATCTGCCGTCACTGGGGTGGCAACATCCTGGGTCCTAAGTCTGTGGCTC				4q25f	PREDICTED: Homo sapiens similar to 60S ribosomal protein L7a (LOC441034), mRNA.					
Homo sapiens	RefSeq	NM_014723.2	ILMN_26354	SNPH	NM_014723.2	NM_014723.2		9751	38202245	NM_014723.2	SNPH	NP_055538.2	ILMN_1757532	0000290477	S	4501	CAGACGTGGCTTCTCCTGAGTTCTAGGGCTCGGGCCAGAGTGGCACTACT	20	+	1237478-1237527	20p13e	Homo sapiens syntaphilin (SNPH), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [pmid 10707983] [evidence NAS]; The initial attachment of a synaptic vesicle membrane to the presynaptic membrane, mediated by proteins protruding from the membrane of the synaptic vesicle and the target membrane [goid 16081] [pmid 10707983] [evidence NAS]	Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [pmid 10707983] [evidence NAS]	bA314N13.5; MGC46096; KIAA0374	bA314N13.5; MGC46096; KIAA0374
Homo sapiens	RefSeq	NM_020803.3	ILMN_19798	KLHL8	NM_020803.3	NM_020803.3		57563	34101267	NM_020803.3	KLHL8	NP_065854.3	ILMN_1714083	0002000019	S	3872	CAGAGGCAGTTAACCCTGTAGCACTTACTAGACTGGTGACAACTGGCTGG	4	-	88301892-88301941	4q22.1a	Homo sapiens kelch-like 8 (Drosophila) (KLHL8), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ46304; KIAA1378	FLJ46304; KIAA1378
Homo sapiens	RefSeq	NM_020803.3	ILMN_19798	KLHL8	NM_020803.3	NM_020803.3		57563	34101267	NM_020803.3	KLHL8	NP_065854.3	ILMN_2189222	0007100349	S	4516	GCAATGAGCCGAGGTTGAGCCATCGCACTCCAGCGGTGAAACAAGAGTGA	4	-	88301248-88301297	4q22.1a	Homo sapiens kelch-like 8 (Drosophila) (KLHL8), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ46304; KIAA1378	FLJ46304; KIAA1378
Homo sapiens	RefSeq	XM_001716222.1	ILMN_341100	LOC100134397	XM_001716222.1	XM_001716222.1		100134397	169209218	XM_001716222.1	LOC100134397	XP_001716274.1	ILMN_3240567	0004920433	S	1306	GTGGTTCTGCTTCCTCACATCCTCACTGCAGGCAAGAAAGAAGGGAGAAA					PREDICTED: Homo sapiens similar to hCG1812074 (LOC100134397), mRNA.					
Homo sapiens	RefSeq	NM_001005213.1	ILMN_175117	OR9G1	NM_001005213.1	NM_001005213.1		390174	52353310	NM_001005213.1	OR9G1	NP_001005213.1	ILMN_1789395	0006330010	S	11	GCAATCATACAGTGACTGAGTTTATACTGCTGGGCTTCACCACAGACCCA	11	+	56224450-56224499	11q11c	Homo sapiens olfactory receptor, family 9, subfamily G, member 1 (OR9G1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR9G5	OR9G5
Homo sapiens	RefSeq	NM_001005213.1	ILMN_175117	OR9G1	NM_001005213.1	NM_001005213.1		390174	52353310	NM_001005213.1	OR9G1	NP_001005213.1	ILMN_2089097	0006350014	S	155	CCTGCCTCCACACACCCATGTATTTTTTCACTGGAAATCTGTCGTTTCTG	11	+	56224594-56224643	11q11c	Homo sapiens olfactory receptor, family 9, subfamily G, member 1 (OR9G1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR9G5	OR9G5
Homo sapiens	RefSeq	XM_942426.1	ILMN_172288	C17ORF41	XM_001134002.1	XM_001134002.1		79915	113427355	XM_001134002.1	C17orf41	XP_001134002.1	ILMN_1686835	0006290070	A	4631	CGTGTAGACCTTCCAAAATGTGACAGTGGCTGTGCTGAGACCTTGTTTGG				17q11.2c	PREDICTED: Homo sapiens chromosome 17 open reading frame 41 (C17orf41), mRNA.					
Homo sapiens	RefSeq	XM_942426.1	ILMN_172288	C17ORF41	XM_001134002.1	XM_001134002.1		79915	113427355	XM_001134002.1	C17orf41	XP_001134002.1	ILMN_1687725	0006510390	I	3622	TTACATTTCTACTTCTCAGAGATAATCATTGAAAATTTTTTGTAAAAGCT				17q11.2c	PREDICTED: Homo sapiens chromosome 17 open reading frame 41 (C17orf41), mRNA.					
Homo sapiens	RefSeq	NM_024857.3	ILMN_172288	C17ORF41	XM_001134002.1	XM_001134002.1		79915	113427355	XM_001134002.1	C17orf41	XP_001134002.1	ILMN_1732374	0003370600	A	5681	CTGCCAACCCTTCGAAACATCTGTAAGACTGAGAAGCTAAAAGAACAAGG				17q11.2c	PREDICTED: Homo sapiens chromosome 17 open reading frame 41 (C17orf41), mRNA.					FLJ12735; FRAG1; C17orf41
Homo sapiens	RefSeq	NM_017875.1	ILMN_9590	SLC25A38	NM_017875.1	NM_017875.1		54977	8923519	NM_017875.1	SLC25A38	NP_060345.1	ILMN_1781231	0002680639	S	1649	AGCAATCACAAAGCCAGAGAAGCTGTAAGCTGCCTGCCGGGCCTGAGGAG	3	+	39413372-39413421	3p22.1c	Homo sapiens solute carrier family 25, member 38 (SLC25A38), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ20551; FLJ22703	FLJ20551; FLJ22703
Homo sapiens	RefSeq	NM_004652.3	ILMN_37889	USP9X	NM_001039591.2	NM_001039591.2		8239	145309310	NM_001039591.2	USP9X	NP_001034680.2	ILMN_1656165	0004570411	A	9338	CCCAGTGACGTGGAAGTCATCAGAACCCCACGGTACTTGGAGTACCTCTC	X	+	40977286-40977335	Xp11.4b	Homo sapiens ubiquitin specific peptidase 9, X-linked (USP9X), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [pmid 8922996] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 9827704] [evidence TAS]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16306228] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DFFRX; FAF	DFFRX
Homo sapiens	RefSeq	NM_030666.2	ILMN_10210	SERPINB1	NM_030666.2	NM_030666.2		1992	20149554	NM_030666.2	SERPINB1	NP_109591.1	ILMN_1679133	0003190112	S	912	CGCCTAGGTGTGCAGGATCTCTTTAACAGTAGCAAGGCTGATCTGTCTGG	6	-	2834064-2834113	6p25.2b	Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 1 (SERPINB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 1376927] [evidence NAS]	EI; MNEI; ELANH2; M/NEI; LEI; PI2	EI; MNEI; ELANH2; M/NEI; LEI; PI2
Homo sapiens	RefSeq	XM_926622.1	ILMN_30720	LOC643262	XM_926622.1	XM_926622.1		643262	89029356	XM_926622.1	LOC643262	XP_931715.1	ILMN_1752139	0007380114	S	269	GCATGACTCTGTCTGCATGCGGCCTCTCCAGAGTGACCCTGTCTGTATGT	9	-	44690184-44690233		PREDICTED: Homo sapiens hypothetical protein LOC643262 (LOC643262), mRNA.					
Homo sapiens	RefSeq	NM_014706.2	ILMN_7878	SART3	NM_014706.3	NM_014706.3		9733	119393885	NM_014706.3	SART3	NP_055521.1	ILMN_1714896	0004830717	S	3574	CCTCTTGTGGGGGTGGGTCTGAGGGAAGTCAGCTATAAAACATTTGCTGG	12	-	108916737-108916786	12q23.3d	Homo sapiens squamous cell carcinoma antigen recognized by T cells 3 (SART3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11477570] [evidence IPI]	RP11-13G14; TIP110; p110(nrb); MGC138188; P100; KIAA0156; DSAP1	RP11-13G14; TIP110; p110(nrb); KIAA0156
Homo sapiens	RefSeq	XM_929676.1	ILMN_32323	LOC646731	XM_929676.1	XM_929676.1		646731	89027998	XM_929676.1	LOC646731	XP_934769.1	ILMN_1677609	0000620563	S	205	CTTTTCCACGCTGAAGGAGTGGAACGCGCGCGGAGGCAGCTCGGCGCCCG	8	-	23627949-23627998		PREDICTED: Homo sapiens similar to tumor suppressing subtransferable candidate 1 (predicted) (LOC646731), mRNA.					
Homo sapiens	Unigene	Hs.551340	ILMN_110599	HS.551340	Hs.551340		Hs.551340		407728	D13080			ILMN_1898071	0002060176	S	48	TGTGGACACGGGCAGGAGAGCACTTACTTTTGGGAGTGGAACAAGACTCC	14	+	22079028-22079077		Human mRNA for T-cell receptor alpha-chain J segment, partial cds, clone WADM36A					
Homo sapiens	Unigene	Hs.368007	ILMN_87693	HS.368007	Hs.368007		Hs.368007		27843459	BX097855			ILMN_1837891	0004290022	S	42	CCGCTGTAGAATCACCAAACAATGCCTCCAAATCCCTCAAGGAGTCAGCC	12	+	19787126-19787175		BX097855 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998O193811, mRNA sequence					
Homo sapiens	Unigene	Hs.349049	ILMN_86974	HS.349049	Hs.349049		Hs.349049		16523837	BM009483			ILMN_1849285	0000060296	S	153	ACCAGGTCCTCAAAGAGGGAAACAGCCCAGCAGTGGCAGGAGAGAGGAGT	15	-	97007820-97007869		603630012F1 NIH_MGC_41 Homo sapiens cDNA clone IMAGE:5443634 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001039111.1	ILMN_9082	TRIM71	NM_001039111.1	NM_001039111.1		131405	84993741	NM_001039111.1	TRIM71	NP_001034200.1	ILMN_2225061	0003120088	S	2605	GCCATCACCCCCGACGGAATGATCGTTGTGGTGGACTTTGGCAACAATCG	3	+	32907327-32907376	3p22.3c	Homo sapiens tripartite motif-containing 71 (TRIM71), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LIN41; LIN-41	LIN41; LIN-41
Homo sapiens	RefSeq	XM_067369.5	ILMN_9082	TRIM71	NM_001039111.1	NM_001039111.1		131405	84993741	NM_001039111.1	TRIM71	NP_001034200.1	ILMN_1714774	0004230458	S	378	TATGGACGCGCTGCCTTCGTCCGCCTTCCTGCTTAGCAACCTGCTCGACG	3	+	32834891-32834940	3p22.3c	Homo sapiens tripartite motif-containing 71 (TRIM71), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LIN41; LIN-41	
Homo sapiens	RefSeq	NM_199254.1	ILMN_25511	TPTE2	NM_199254.1	NM_199254.1		93492	40549424	NM_199254.1	TPTE2	NP_954863.1	ILMN_1654031	0002810725	I	331	TATGTTAGAACGACTTTCCAAGTTTGAAGTTGAAGATGCTGAAAATGTTG	13	-	18954637-18954686	13q12.11a	Homo sapiens transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 (TPTE2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: phosphatidylinositol-3,4,5-trisphosphate + H2O = phosphatidyl inositol-4,5-bisphosphate + phosphate [goid 16314] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC149231; TPIP	MGC149231; TPIP
Homo sapiens	RefSeq	NM_019001.2	ILMN_8924	XRN1	NM_019001.2	NM_019001.2		54464	40254886	NM_019001.2	XRN1	NP_061874.2	ILMN_1809086	0001990487	S	9942	CGTTATCCGTAGATTTCTAGCATGAAGTTAGCCTCACGATGCTGTGCAAA	3	-	143508239-143508288	3q23d	Homo sapiens 5'-3' exoribonuclease 1 (XRN1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end [goid 8409] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp686F19113; DKFZp686B22225; DKFZp434P0721; SEP1	DKFZp686F19113; DKFZp686B22225; DKFZp434P0721; SEP1
Homo sapiens	RefSeq	NM_032370.1	ILMN_18206	ZNF414	NM_032370.1	NM_032370.1		84330	14150190	NM_032370.1	ZNF414	NP_115746.1	ILMN_1771093	0004180014	S	846	CCCCACCGGACCGTTCCTGCCCTACTTGAACCCTGCGCCCTTTGGCCTAA	19	-	8482581-8482630	19p13.2d	Homo sapiens zinc finger protein 414 (ZNF414), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Zfp414; MGC15716	Zfp414; MGC15716
Homo sapiens	RefSeq	XM_936700.1	ILMN_308866	KIAA0226	NM_014687.1	NM_014687.1		9711	150456466	NM_014687.1	KIAA0226	NP_055502.1	ILMN_1763637	0003850066	A	6402	CCCACTTCTGTGAGCAGCTAGCATCTTTCTCTTCTGCTCCTGGCCCACTG	3	-	198882936-198882985	3q29i	Homo sapiens KIAA0226 (KIAA0226), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_002882.2	ILMN_25664	RANBP1	NM_002882.2	NM_002882.2		5902	6382077	NM_002882.2	RANBP1	NP_002873.1	ILMN_2109156	0004610047	S	679	CCGAAAAAGTGGCGGAAAAGCTAGAAGCTCTCTCGGTGAAGGAGGAGACC	22	+	18494499-18494548	22q11.21d	Homo sapiens RAN binding protein 1 (RANBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16130169] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	The directed movement of substances within a cell [goid 46907] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of centrosome separation [goid 46604] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]	Prevents the dissociation of GDP from a GTPase, thereby preventing GTP from binding [goid 5092] [pmid 7616957] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [pmid 7882974] [evidence TAS]	MGC88701	MGC88701
Homo sapiens	RefSeq	NM_002882.2	ILMN_25664	RANBP1	NM_002882.2	NM_002882.2		5902	6382077	NM_002882.2	RANBP1	NP_002873.1	ILMN_1721457	0007000735	S	312	CTGTTCCGATTTGCCTCTGAGAACGATCTCCCAGAATGGAAGGAGCGAGG	22	+	18489797-18489846	22q11.21d	Homo sapiens RAN binding protein 1 (RANBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16130169] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	The directed movement of substances within a cell [goid 46907] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of centrosome separation [goid 46604] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]	Prevents the dissociation of GDP from a GTPase, thereby preventing GTP from binding [goid 5092] [pmid 7616957] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [pmid 7882974] [evidence TAS]	MGC88701	MGC88701
Homo sapiens	RefSeq	XM_001134012.2	ILMN_177732	FABP5L2	XM_001134012.2	XM_001134012.2		729163	169206420	XM_001134012.2	FABP5L2	XP_001134012.1	ILMN_3266606	0000580358	M	306	CACAGACTGTCTGCAACTTTACAGATGGTGCATTGGTTCAGCATCAGGAG				13q14.3d	PREDICTED: Homo sapiens fatty acid binding protein 5-like 2 (FABP5L2), mRNA.					
Homo sapiens	RefSeq	NM_173624.1	ILMN_176567	FLJ40504	NM_173624.1	NM_173624.1		284085	27734743	NM_173624.1	FLJ40504	NP_775895.1	ILMN_2041222	0004880333	S	1791	CAGCAGCAACTCCATGCAAACCATCCAAAAGACTACCACCTGCCGGATAT	17	-	23627248-23627297	17q11.2a	Homo sapiens hypothetical protein FLJ40504 (FLJ40504), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC138233; MGC138231	MGC138233; MGC138231
Homo sapiens	RefSeq	NM_173624.1	ILMN_176567	FLJ40504	NM_173624.1	NM_173624.1		284085	27734743	NM_173624.1	FLJ40504	NP_775895.1	ILMN_1722537	0006040543	S	1349	TGGGCCCAATATGACGAGCTGGCTCCGAAGAACTTAGAGGAGCTGGGCAA	17	-	23627690-23627739	17q11.2a	Homo sapiens hypothetical protein FLJ40504 (FLJ40504), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC138233; MGC138231	
Homo sapiens	RefSeq	XM_001719203.1	ILMN_352102	LOC100134805	XM_001719203.1	XM_001719203.1		100134805	169170411	XM_001719203.1	LOC100134805	XP_001719255.1	ILMN_3248836	0002970307	S	2	TGTGCCCTGTGCGCCACAAAGCGGTTTCTGGCATGGCGGCCCGTCTTTGG	7	+	57549371-57549419:57549585-57549585		PREDICTED: Homo sapiens hypothetical protein LOC100134805 (LOC100134805), mRNA.					
Homo sapiens	RefSeq	XM_001132893.1	ILMN_166724	LOC728802	XM_001132893.1	XM_001132893.1		728802	113411349	XM_001132893.1	LOC728802	XP_001132893.1	ILMN_3230872	0006770632	I	1817	ATCTTGTCCCATTTTGTCGTCCTATCTTACCTCGGGGAAATTGGGGACTG	1	+	144736330-144736379	1q21.1c	PREDICTED: Homo sapiens similar to hCG1981896, transcript variant 3 (LOC728802), mRNA.					
Homo sapiens	RefSeq	XM_001132893.1	ILMN_166724	LOC728802	XM_001132893.1	XM_001132893.1		728802	113411349	XM_001132893.1	LOC728802	XP_001132893.1	ILMN_3221721	0002640131	A	654	GGAGCAGCACCAGTGCCCTGCACCATGCCCTAGAGGAGTCGGCTTCCCTC	1	+	144732242-144732291	1q21.1c	PREDICTED: Homo sapiens similar to hCG1981896, transcript variant 3 (LOC728802), mRNA.					
Homo sapiens	RefSeq	NM_003045.3	ILMN_162673	SLC7A1	NM_003045.3	NM_003045.3		6541	51173150	NM_003045.3	SLC7A1	NP_003036.1	ILMN_1683859	0000020241	S	7107	CTCCCCTTTTTGCTGACAACACTGTGTACATTGACCACTTCCTACCATAC	13	-	28981633-28981682	13q12.3b	Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 (SLC7A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1718082] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 1348489] [evidence NAS]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IEA]	CAT-1; REC1L; HCAT1; ATRC1; ERR	CAT-1; REC1L; HCAT1; ATRC1; ERR
Homo sapiens	RefSeq	NM_006168.1	ILMN_22944	NKX6-1	NM_006168.1	NM_006168.1		4825	5453787	NM_006168.1	NKX6-1	NP_006159.1	ILMN_1756254	0005890035	S	1010	ACGACGAGAAAATCACGCAGCTGTTGAAGAAGCACAAGTCCAGCAGCGGC	4	-	85633516-85633565	4q21.23a	Homo sapiens NK6 transcription factor related, locus 1 (Drosophila) (NKX6-1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10567713] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of glia cell differentiation [goid 45686] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of glia cell differentiation [goid 45687] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	NKX6A; NKX6.1	NKX6A; NKX6.1
Homo sapiens	RefSeq	NM_032145.4	ILMN_165660	FBXO30	NM_032145.4	NM_032145.4		84085	54112383	NM_032145.4	FBXO30	NP_115521.3	ILMN_2168992	0005290307	S	4066	TCTGCCTTTTAAAGTTTTGCTGAAGAATGTGTCTGTGGTTAGGATAGCAC	6	-	146161256-146161305	6q24.3a	Homo sapiens F-box protein 30 (FBXO30), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC21674; Fbx30; FLJ41030	Fbx30; MGC21674; FLJ41030
Homo sapiens	RefSeq	NM_032145.4	ILMN_165660	FBXO30	NM_032145.4	NM_032145.4		84085	54112383	NM_032145.4	FBXO30	NP_115521.3	ILMN_1700232	0002510048	S	3736	GTGTCCTCTCTTCCTACATTTGTCCCTGAGAGTACTCCACGATTACTAGG	6	-	146161586-146161635	6q24.3a	Homo sapiens F-box protein 30 (FBXO30), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC21674; Fbx30; FLJ41030	Fbx30; MGC21674; FLJ41030
Homo sapiens	RefSeq	NR_030343.1	ILMN_388085	MIR612	NR_030343.1	NR_030343.1		693197	262206055	NR_030343.1	MIR612		ILMN_3308148	0007100296	S	4	ATCTGGACCCTGCTGGGCAGGGCTTCTGAGCTCCTTAGCACTAGCAGGAG				11q13.1c	Homo sapiens microRNA 612 (MIR612), microRNA.					
Homo sapiens	Unigene	Hs.461819	ILMN_94374	HS.461819	Hs.461819		Hs.461819		34528573	AK123107			ILMN_1912997	0007210671	S	3041	GGGTTGCCAAAGCCTCCCTTCCAAGAAACTTGCTTAGGTGTCTGGTGTCC	17	-	361839-361888		Homo sapiens cDNA FLJ41112 fis, clone BRACE1000239					
Homo sapiens	RefSeq	XM_001721651.1	ILMN_335130	LOC731787	XM_001721651.1	XM_001721651.1		731787	169194586	XM_001721651.1	LOC731787	XP_001721703.1	ILMN_3297605	0000110408	M	247	GAGGGACCTGACAGCAGCACATTGGACACCAGAAGACACCCAAAGGCTGG					PREDICTED: Homo sapiens hypothetical LOC731787 (LOC731787), mRNA.					
Homo sapiens	RefSeq	NM_183059.1	ILMN_30136	RD3	NM_183059.1	NM_183059.1		343035	34098969	NM_183059.1	RD3	NP_898882.1	ILMN_1741843	0000770138	S	2932	GTGTAAGGGGGATGGGTGGGGAAGTGTCTACCCTCAACTACCAGCACACA	1	-	209717771-209717820	1q32.3a	Homo sapiens retinal degeneration 3 (RD3), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]		LCA12; C1orf36	LCA12; C1orf36
Homo sapiens	RefSeq	NR_004855.2	ILMN_334778	HULC	NR_004855.2	NR_004855.2		728655	167000144	NR_004855.2	HULC		ILMN_3241495	0003170403	S	72	ACGTGAGGATACAGCAAGGCCCCAATCTGCAAGCCAGGAAGAGTCGTCAC	6	+	8652513-8652562	6p24.3b	Homo sapiens highly up-regulated in liver cancer (non-protein coding) (HULC), non-coding RNA.					
Homo sapiens	Unigene	Hs.543130	ILMN_106789	HS.543130	Hs.543130		Hs.543130		2583484	AA651832			ILMN_1869823	0001580273	S	213	GAAGGGGGAGAGGACAGGGTCAAGAATGTACTGGGCAGTGAGATCAGCAC	3	-	62999831-62999880		ns40b05.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:1186065 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038921.1	ILMN_343474	LOC728429	XR_038921.1	XR_038921.1		728429	169166595	XR_038921.1	LOC728429		ILMN_3225333	0006100669	A	3421	GATGAGCAAGAAATTCAAGCCCTTGGCAAACTGGTTGGAGAGGAAAGGAC				4p16.1c	PREDICTED: Homo sapiens misc_RNA (LOC728429), miscRNA.					
Homo sapiens	RefSeq	NM_000302.2	ILMN_20559	PLOD1	NM_000302.2	NM_000302.2		5351	32307143	NM_000302.2	PLOD1	NP_000293.2	ILMN_1684391	0000060437	S	2929	CCTGTCCTGGATGCCTCTGAAGAGAGGGACAGACCGTCAGAAACTGGAGA	1	+	11958106-11958155	1p36.22a	Homo sapiens procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1 (PLOD1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the rough endoplasmic reticulum [goid 30867] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 15174142] [evidence IEP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 1577494] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 8449506] [evidence IMP]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 1577494] [evidence TAS]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid [goid 46947] [pmid 1577494] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 1577494] [evidence TAS]	Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2 [goid 8475] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 1577494] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LLH; PLOD; LH	LLH; PLOD; LH
Homo sapiens	RefSeq	NM_134269.1	ILMN_19010	SMTN	NM_134269.1	NM_134269.1		6525	19913395	NM_134269.1	SMTN	NP_599031.1	ILMN_2328327	0003360181	A	2487	AAGACCTCAGCCTCCCAGGCGCGCAAGGCCATGATTGAGAAGCTGGAGAA	22	+	29824762-29824811	22q12.2c	Homo sapiens smoothelin (SMTN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 8707825] [evidence TAS]	A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 8707825] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8707825] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8707825] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8707825] [evidence TAS]	FLJ38597; FLJ35365	FLJ38597; FLJ35365
Homo sapiens	RefSeq	NM_134269.1	ILMN_19010	SMTN	NM_134269.1	NM_134269.1		6525	19913395	NM_134269.1	SMTN	NP_599031.1	ILMN_2250445	0000840189	I	2933	CCAGAAGGGGCTGGTAAAAACCAAAAAGTCCTAACCCCTGCTCGGGGCCC	22	+	29826982-29827015:29827016-29827031	22q12.2c	Homo sapiens smoothelin (SMTN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 8707825] [evidence TAS]	A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 8707825] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8707825] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8707825] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8707825] [evidence TAS]	FLJ38597; FLJ35365	FLJ38597; FLJ35365
Homo sapiens	RefSeq	NM_018093.1	ILMN_21873	WDR74	NM_018093.1	NM_018093.1		54663	8922421	NM_018093.1	WDR74	NP_060563.1	ILMN_2270845	0003840647	I	55	TTGAACCCGGGAGGCGGAGGTTGAGCAACTACACTGCGCTGCATCGGACT	11	-	62363682-62363707:62364126-62364149	11q12.3b	Homo sapiens WD repeat domain 74 (WDR74), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FLJ10439; FLJ21730	FLJ10439; FLJ21730
Homo sapiens	RefSeq	Hs.297558	ILMN_181865	LOC732226	XM_001132315.1	XM_001132315.1		732226	113429234	XM_001132315.1	LOC732226	XP_001132315.1	ILMN_1897213	0006620300	S	1544	AAGGCCAGCGTAGTCATTTCTCGGCCATGCACACCTGTGATGTGGCAAGC				21q22.2b	PREDICTED: Homo sapiens hypothetical LOC732226 (LOC732226), mRNA.					
Homo sapiens	RefSeq	NM_032449.1	ILMN_11389	CC2D1B	NM_032449.1	NM_032449.1		200014	61742813	NM_032449.1	CC2D1B	NP_115825.1	ILMN_1690291	0005810575	S	5117	GCGTCACTGGTAGTAGGAGGAGCCTGTCCCAGCTTCATCTTGTCCTGAGA	1	-	52816739-52816788	1p32.3d	Homo sapiens coiled-coil and C2 domain containing 1B (CC2D1B), mRNA.				RP11-155O18.2; KIAA1836	RP11-155O18.2; KIAA1836
Homo sapiens	RefSeq	NM_133432.1	ILMN_10941	TTN	NM_133432.2	NM_133432.2		7273	110349712	NM_133432.2	TTN	NP_597676.2	ILMN_1667504	0000610097	I	10517	CAACGGGGAGACAGTCAGATTTCATGCGAGGGTTTCTGGCATTCCCAAGC	2	-	179622466-179622515	2q31.2b	Homo sapiens titin (TTN), transcript variant novex-1, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 10481174] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [pmid 7569978] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 9501083] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 8937992] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 97092327] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [pmid 7569978] [evidence TAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 10481174] [evidence TAS]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [pmid 9804419] [evidence IMP]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 9804419] [evidence IMP]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9804419] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 10481174] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9804419] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 7569978] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [pmid 11717165] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 9804419] [evidence IPI]; Interacting selectively with alpha-actinin, one of a family of proteins that cross-link F-actin as antiparallel homodimers. Alpha-actinin has a molecular mass of 93-103 KDa; at the N-terminus there are two calponin homology domains, at the C-terminus there are two EF-hands. These two domains are connected by the rod domain. This domain is formed by triple-helical spectrin repeats [goid 51393] [pmid 10481174] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ39564; CMD1G; TMD; FLJ43066; HMERF; FLJ26409; CMH9; FLJ26020; EOMFC; LGMD2J; CMPD4; DKFZp451N061; FLJ32040; FLJ34413	HMERF; LGMD2J; MPRM; CMPD4; CMD1G; TMD; CMH9; DKFZp451N061; FLJ32040
Homo sapiens	RefSeq	NM_018937.2	ILMN_172487	PCDHB3	NM_018937.2	NM_018937.2		56132	14195609	NM_018937.2	PCDHB3	NP_061760.1	ILMN_2128048	0003610482	S	3099	ATGGGTAATTACCCTTTGGTTTATCTAAAGTGTGTTCATGATGACTGAGG	5	+	140463516-140463565	5q31.3b	Homo sapiens protocadherin beta 3 (PCDHB3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 12231349] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 12231349] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11322959] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11322959] [evidence NAS]	PCDH-BETA3	PCDH-BETA3
Homo sapiens	RefSeq	NR_024162.1	ILMN_364666	FKBP1P1	NR_024162.1	NR_024162.1		2282	206725513	NR_024162.1	FKBP1P1		ILMN_3239766	0000360010	S	1324	TAGACTTCACACCCAATGAAAGCCCAGCCATTGCCGGGCACGGTGGCTCA	19	-	58336936-58336985	19q13.43c	Homo sapiens FK506 binding protein 1 pseudogene 1 (FKBP1P1), non-coding RNA.					
Homo sapiens	RefSeq	NM_001025193.1	ILMN_993	DHODH	NM_001025193.1	NM_001025193.1		1723	68509923	NM_001025193.1	DHODH	NP_001020364.1	ILMN_2381206	0000630475	A	1248	CCCTGCCAAGATACTGCAGGTCCATCCAGGCCTCTGCTATCTGCATCTGC	16	+	70615940-70615989	16q22.3a	Homo sapiens dihydroorotate dehydrogenase (DHODH), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate [goid 6222] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-dihydroorotate + acceptor = orotate + reduced acceptor [goid 4152] [evidence IEA]; Catalysis of the reaction: (S)-dihydroorotate + O2 = orotate + H2O2 [goid 4158] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DHOdehase	DHOdehase
Homo sapiens	RefSeq	XR_038738.1	ILMN_342255	LOC729301	XR_038738.1	XR_038738.1		729301	169161762	XR_038738.1	LOC729301		ILMN_3301324	0005420133	M	394	GTGAACAAAGCACCTAAGATGTGCCGCTGGACCTACAGAGCTCATGGTTG				1p36.11b	PREDICTED: Homo sapiens misc_RNA (LOC729301), miscRNA.					
Homo sapiens	RefSeq	XM_942444.1	ILMN_32872	LOC652787	XM_942444.1	XM_942444.1		652787	89064459	XM_942444.1	LOC652787	XP_947537.1	ILMN_1710834	0006280373	S	1	ATGGCTCCCTCCCCCAGTAGCCCGCAGAAGGGAACAACGAAGGAGACTCG					PREDICTED: Homo sapiens similar to double homeobox 4c (LOC652787), mRNA.					
Homo sapiens	RefSeq	XM_001126608.2	ILMN_170880	MRGPRG	XM_001126608.2	XM_001126608.2		386746	169202544	XM_001126608.2	MRGPRG	XP_001126608.2	ILMN_3299421	0001710450	M	629	CCTGGACGGCTGGCGTGGTCCTCTTTGTCTGGGTGACCTGCTGCTCCACT	11	-	3196049-3196098	11p15.4d	PREDICTED: Homo sapiens MAS-related GPR, member G (MRGPRG), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	XR_001427.1	ILMN_137132	CYP2D7P1	XR_001427.1	XR_001427.1		1564	89059162	XR_001427.1	CYP2D7P1		ILMN_1738062	0007380291	A	1101	AAGGAGAGTGTCCCCTGGGTGCTGACCCATTGTGGGGACGCATGTCTGTC				22q13.2b	PREDICTED: Homo sapiens cytochrome P450, family 2, subfamily D, polypeptide 7 pseudogene 1 (CYP2D7P1), misc RNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_003529.2	ILMN_28422	HIST1H3A	NM_003529.2	NM_003529.2		8350	19743828	NM_003529.2	HIST1H3A	NP_003520.1	ILMN_1776845	0003120711	S	143	CTCTGCGCGAGATCCGCCGTTATCAGAAGTCCACTGAACTGCTTATTCGT	6	+	26020860-26020909	6p22.1d	Homo sapiens histone cluster 1, H3a (HIST1H3A), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11242053] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11791185] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11242053] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10949293] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11242053] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16415881] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10949293] [evidence IPI]	H3/A; H3FA	H3/A; H3FA
Homo sapiens	RefSeq	XM_001725595.1	ILMN_348763	LOC100129417	XM_001725595.1	XM_001725595.1		100129417	169188369	XM_001725595.1	LOC100129417	XP_001725647.1	ILMN_3268962	0006220215	M	583	TCCTCCGCAGTCTGCCGTCTGCACCGGGAACAAGCCGTTACCTGCCAGGA	10	-	102886405-102886454	10q24.31a	PREDICTED: Homo sapiens hypothetical LOC100129417 (LOC100129417), mRNA.					
Homo sapiens	RefSeq	NM_153822.1	ILMN_21724	PSMD4	NM_153822.2	NM_153822.2		5710	78000205	NM_153822.2	PSMD4	NP_722544.1	ILMN_1711765	0000290376	I	957	CTTGGAGGCTGGCCTGTGTGGATATGGCACCAATTCTACCCTGCTCCTCT	1	+	149505344-149505393	1q21.2d	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 (PSMD4), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17662948] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17891176] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	pUB-R5; Rpn10; AF-1; AF; ASF; MCB1; S5A	pUB-R5; Rpn10; AF-1; AF; ASF; MCB1; S5A
Homo sapiens	RefSeq	NM_145796.2	ILMN_14081	POGZ	NM_145796.2	NM_145796.2		23126	46397391	NM_145796.2	POGZ	NP_665739.2	ILMN_1733441	0003890465	I	1843	GCTGTTGTGGTGGGGAAGCAGCCACAGATACATAAACGAATGAGCATGGC	1	-	151399790-151399839	1q21.3a	Homo sapiens pogo transposable element with ZNF domain (POGZ), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10976766] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF280E; ZNF635m; SUHW5; MGC71543; KIAA0461; ZNF635	ZNF280E; ZNF635m; SUHW5; MGC71543; KIAA0461; ZNF635
Homo sapiens	RefSeq	NM_006253.4	ILMN_23188	PRKAB1	NM_006253.4	NM_006253.4		5564	38016923	NM_006253.4	PRKAB1	NP_006244.2	ILMN_1793522	0001260440	S	2180	GTCGCCACAGATGTACCCACTAGCCCAGGTTGCTGTGAGTCAGCGGAAGC	12	+	118603591-118603640	12q24.23c	Homo sapiens protein kinase, AMP-activated, beta 1 non-catalytic subunit (PRKAB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9575201] [evidence TAS]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18403135] [evidence IPI]	AMPK; HAMPKb; MGC17785	AMPK; HAMPKb; MGC17785
Homo sapiens	RefSeq	NM_013313.3	ILMN_26647	YPEL1	NM_013313.3	NM_013313.3		29799	40549458	NM_013313.3	YPEL1	NP_037445.1	ILMN_1795338	0005130288	S	3650	GAGCTGGCTTCAGGGGAAGTGCTATTCACAGGACCATATCCACCACCCTC	22	-	22052410-22052459	22q11.21f	Homo sapiens yippee-like 1 (Drosophila) (YPEL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC64992; FKSG3	MGC64992; FKSG3
Homo sapiens	RefSeq	XM_930492.1	ILMN_42446	LOC645520	XM_930492.1	XM_930492.1		645520	88942120	XM_930492.1	LOC645520	XP_935585.1	ILMN_1661451	0004830446	A	151	AGGGGGCAGGAATTGGGGGTGACAGGAGAGCTGTAAGGTCTCCAGTGGGT	1	-	25734-25783		PREDICTED: Homo sapiens similar to signal-transducing adaptor protein-2 isoform 1, transcript variant 1 (LOC645520), mRNA.					
Homo sapiens	RefSeq	NM_182924.1	ILMN_8459	MICALL2	NM_182924.2	NM_182924.2		79778	142387938	NM_182924.2	MICALL2	NP_891554.1	ILMN_1664581	0001400646	I	764	TGCTTCAGGTGTAAGCAGTGCTCCTGCACGCTGCACTCGGGGGCCTACAA				7p22.3b	Homo sapiens MICAL-like 2 (MICALL2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A long bundle of actin filaments, comprising filamentous actin and associated proteins, found in cells [goid 30482] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	JRAB; MICAL-L2; FLJ23471; FLJ44858; MGC46023	JRAB; MICAL-L2; FLJ23471; FLJ44858; MGC46023
Homo sapiens	RefSeq	NM_182924.1	ILMN_8459	MICALL2	NM_182924.2	NM_182924.2		79778	142387938	NM_182924.2	MICALL2	NP_891554.1	ILMN_1712291	0004120593	A	2811	GGTCACCAAAAAGCAAAAGCAGCCCCTCCCAGTAGTAGCCAGTAGGGCCG				7p22.3b	Homo sapiens MICAL-like 2 (MICALL2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A long bundle of actin filaments, comprising filamentous actin and associated proteins, found in cells [goid 30482] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	JRAB; MICAL-L2; FLJ23471; FLJ44858; MGC46023	JRAB; MICAL-L2; FLJ23471; FLJ44858; MGC46023
Homo sapiens	RefSeq	NM_000877.2	ILMN_15035	IL1R1	NM_000877.2	NM_000877.2		3554	27894331	NM_000877.2	IL1R1	NP_000868.1	ILMN_1810584	0000240274	S	4355	GGAGGGACAAGAATCAATGGATAAGCGTGGGTGGAGGAAGATCCAAACAG	2	+	102162214-102162263	2q12.1a	Homo sapiens interleukin 1 receptor, type I (IL1R1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2530587] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 2530587] [evidence TAS];  [goid 4909] [pmid 9120302] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9062193] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286467] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12721283] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9062194] [evidence IPI]	IL1R; IL-1R-alpha; P80; CD121A; IL1RA; D2S1473	IL1R; IL-1R-alpha; P80; CD121A; IL1RA; D2S1473
Homo sapiens	RefSeq	NM_203466.1	ILMN_11236	PPIL5	NM_203466.1	NM_203466.1		122769	45439343	NM_203466.1	PPIL5	NP_982291.1	ILMN_1758085	0005130044	I	612	GTCTCATTCTGTCACCCAGGTTGGAGTGCAGTGGGAAGAGCTTGGTTCAC	14	+	49140025-49140074	14q22.1a	Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 5 (PPIL5), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MGC20689; 4-1BBLRR; LRR-1	MGC20689; 4-1BBLRR; LRR-1
Homo sapiens	RefSeq	NM_014321.2	ILMN_178721	ORC6L	NM_014321.2	NM_014321.2		23594	32454755	NM_014321.2	ORC6L	NP_055136.1	ILMN_2215061	0002230296	S	1303	TGCACCACCGCACTCCAGCCTGGGTGACAGAGCGAGACTTATCTCATAAA	16	+	45289482-45289531	16q11.2i	Homo sapiens origin recognition complex, subunit 6 like (yeast) (ORC6L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11125146] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15684404] [evidence EXP]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]	ORC6	ORC6
Homo sapiens	RefSeq	XM_001714476.1	ILMN_334970	LOC100130274	XM_001714476.1	XM_001714476.1		100130274	169172662	XM_001714476.1	LOC100130274	XP_001714528.1	ILMN_3253105	0001710471	M	1112	TGTCGCTGGTGCAGTCACTCGAGGGCTCTGGGATCTCTTCGGGGTCCTCA				8q24.3g	PREDICTED: Homo sapiens similar to hCG1646697 (LOC100130274), mRNA.					
Homo sapiens	RefSeq	NM_000570.2	ILMN_8741	FCGR3B	NM_000570.2	NM_000570.2		2215	50355969	NM_000570.2	FCGR3B	NP_000561.2	ILMN_2134453	0007210114	S	1829	ACGCTGTGAAACTTTCAAATCCTTCTTCAGTCAGTTCCAATGAGGTGGGG	1	-	159859769-159859818	1q23.3b	Homo sapiens Fc fragment of IgG, low affinity IIIb, receptor (CD16b) (FCGR3B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2139735] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	CD16b; FCG3; CD16; FCGR3	CD16b; FCG3; CD16; FCGR3
Homo sapiens	RefSeq	NM_001042604.1	ILMN_164210	XRN1	NM_001042604.1	NM_001042604.1		54464	110624786	NM_001042604.1	XRN1	NP_001036069.1	ILMN_2384216	0000110338	A	7554	CCCCCTGTAGACCCATTCTAAATGTGGGCCTGAGGTCAATGGGAGATGTG	3	-	143510588-143510637	3q23d	Homo sapiens 5'-3' exoribonuclease 1 (XRN1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 5' end [goid 8409] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp686F19113; DKFZp686B22225; FLJ41903; DKFZp434P0721; SEP1	DKFZp686F19113; DKFZp686B22225; FLJ41903; DKFZp434P0721; SEP1
Homo sapiens	Unigene	Hs.169896	ILMN_80161	HS.169896	Hs.169896		Hs.169896		3785415	AI216374			ILMN_1869193	0003190477	S	184	CCAGGGGAGTAGGGAACCTGTCCTTCAGCCGTCAGATTGGAGTTCAACCC	16	-	86894155-86894204		qh09e06.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1844194 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001002858.1	ILMN_9658	ANXA2	NM_001002858.1	NM_001002858.1		302	50845387	NM_001002858.1	ANXA2	NP_001002858.1	ILMN_2409167	0004780615	A	1130	TGTGGTGGAGATGACTGAAGCCCGACACGGCCTGAGCGTCCAGAAATGGT	15	-	58427088-58427120:58427121-58427137	15q22.2a	Homo sapiens annexin A2 (ANXA2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7961821] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10809787] [evidence TAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 7961821] [evidence TAS]	Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [pmid 3013422] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	P36; LPC2D; ANX2L4; ANX2; PAP-IV; CAL1H; LIP2; LPC2	P36; LPC2D; ANX2L4; ANX2; PAP-IV; CAL1H; LIP2; LPC2
Homo sapiens	RefSeq	XM_939186.1	ILMN_20920	GPSM1	NM_015597.2	NM_015597.2		26086	34594663	NM_015597.2	GPSM1	NP_056412.2	ILMN_1751666	0000460692	A	1834	AGCCTCATTCAGAGGGTGCAGGCTAAGCGCATGGACGAGCAGCGGGTGGA	9	+	138372368-138372417	9q34.3d	Homo sapiens G-protein signaling modulator 1 (AGS3-like, C. elegans) (GPSM1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZP727I051; AGS3	
Homo sapiens	RefSeq	NM_015597.2	ILMN_20920	GPSM1	NM_015597.2	NM_015597.2		26086	34594663	NM_015597.2	GPSM1	NP_056412.2	ILMN_1667064	0006100603	I	61	TTCAAGACAGGCGTGGCCTTCTTTGAGGCTGCTGTGCAGGTGGGCACCGA	9	+	138348786-138348835	9q34.3d	Homo sapiens G-protein signaling modulator 1 (AGS3-like, C. elegans) (GPSM1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZP727I051; AGS3	DKFZP727I051; AGS3
Homo sapiens	RefSeq	NM_017828.2	ILMN_138383	COMMD4	NM_017828.2	NM_017828.2		54939	21361660	NM_017828.2	COMMD4	NP_060298.2	ILMN_1778562	0000010097	S	1637	CCTGGAATCTGGACCCCATGGCCCAGTCAGGTTACACAAAACTGATCATC	15	+	73421030-73421079	15q24.2a	Homo sapiens COMM domain containing 4 (COMMD4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15799966] [evidence IPI]	FLJ20452	FLJ20452
Homo sapiens	RefSeq	XM_001719824.1	ILMN_345219	LOC652751	XM_001719824.1	XM_001719824.1		652751	169218127	XM_001719824.1	LOC652751	XP_001719876.1	ILMN_3243839	0001820598	S	266	GTCAGGAGGCCCCCAGGAGCAAGTGGCCCTGGCAGGTGAGCCTGAGAGTC					PREDICTED: Homo sapiens similar to tryptase (LOC652751), partial mRNA.					
Homo sapiens	RefSeq	XM_934207.1	ILMN_33861	LOC653468	XM_944657.2	XM_944657.2		653468	113422016	XM_944657.2	LOC653468	XP_949750.2	ILMN_1687273	0002640482	I	94	ATCGCGAGTGGGAAGGTCCTCCCGCGGTCCTCCGGGTCATCTTTCCTCCT					PREDICTED: Homo sapiens hypothetical protein LOC653468, transcript variant 3 (LOC653468), mRNA.					
Homo sapiens	RefSeq	NM_016371.2	ILMN_5318	HSD17B7	NM_016371.2	NM_016371.2		51478	50593017	NM_016371.2	HSD17B7	NP_057455.1	ILMN_1671661	0003420328	S	1231	TAGCTGGGTGTGGTGGCATGCGCATGTAGTCCCAGCTACTCAGAAGGATG	1	+	161048944-161048993	1q23.3c	Homo sapiens hydroxysteroid (17-beta) dehydrogenase 7 (HSD17B7), mRNA.	The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11969204] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [pmid 10544267] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4-alpha-methyl-5-alpha-cholest-7-en-3-beta-ol + NADP+ = 4-alpha-methyl-5-alpha-cholest-7-en-3-one + NADPH + H+ [goid 50576] [evidence IEA]; Catalysis of the reaction: 4-alpha-methyl-5-alpha-cholest-7-en-3-beta-ol + NADP+ = 4-alpha-methyl-5-alpha-cholest-7-en-3-one + NADPH + H+ [goid 50576] [pmid 11969204] [evidence EXP]	MGC12523; MGC75018; PRAP	MGC12523; MGC75018; PRAP
Homo sapiens	RefSeq	NM_182664.2	ILMN_690	RASSF5	NM_182664.2	NM_182664.2		83593	115430204	NM_182664.2	RASSF5	NP_872605.1	ILMN_2362902	0005810176	A	3097	GCTCCTGCTGCAACCGCTGTGAATGCTGCTGAGAACCTCCCTCTATGGGG	1	+	204828832-204828881	1q32.1h	Homo sapiens Ras association (RalGDS/AF-6) domain family member 5 (RASSF5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9488663] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12845325] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15109305] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16892067] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NORE1B; RAPL; MGC10823; Maxp1; NORE1A; MGC17344; NORE1; RASSF3	RAPL; MGC10823; Maxp1; NORE1; RASSF3
Homo sapiens	RefSeq	NM_003787.1	ILMN_16134	NOL4	NM_003787.3	NM_003787.3		8715	148235599	NM_003787.3	NOL4	NP_003778.2	ILMN_1756052	0007510041	S	2017	CTCCAGACCCCAGCTGAGTCCAACTGAAATCAATGCCGTGAGACAGCTTG	18	-	31432885-31432934	18q12.1f-q12.1g	Homo sapiens nucleolar protein 4 (NOL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9813152] [evidence TAS]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9813152] [evidence TAS]	NOLP; HRIHFB2255	NOLP; HRIHFB2255
Homo sapiens	RefSeq	NM_024869.1	ILMN_20963	GRRP1	NM_024869.1	NM_024869.1		79927	13376303	NM_024869.1	GRRP1	NP_079145.1	ILMN_1707055	0000940689	S	1100	GTTTAGCGTCTGAACCTTGGGGAGGTGGAACAAGTTGCTGCCGAAGGCCC	1	+	26361282-26361298:26361299-26361331	1p36.11b	Homo sapiens glycine/arginine rich protein 1 (GRRP1), mRNA.				RP11-96L14.5; FLJ14050	RP11-96L14.5; FLJ14050
Homo sapiens	RefSeq	XM_498461.2	ILMN_308757	CTAGE6	NM_178561.4	NM_178561.4		340307	146262004	NM_178561.4	CTAGE6	NP_848656.2	ILMN_1806463	0005910170	A	2435	GCGAGTTCCCTTCAGGATTGATTCCGCCTTTAATGCTACTGAACATCCAG	7	-	143452359-143452408	7q35a	Homo sapiens CTAGE family, member 6 (CTAGE6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		MGC41943	
Homo sapiens	RefSeq	NM_005832.3	ILMN_15690	KCNMB2	NM_005832.3	NM_005832.3		10242	31317293	NM_005832.3	KCNMB2	NP_005823.1	ILMN_2332440	0004390471	A	2151	GCCTTTGTTCACATTGCTATTTACTTTTGTGTTTGGGGGAAAATACGAGG	3	+	178561869-178561918	3q26.32c	Homo sapiens potassium large conductance calcium-activated channel, subfamily M, beta member 2 (KCNMB2), transcript variant 2, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 10692449] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal [goid 5513] [pmid 10692449] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10692449] [evidence IDA]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [pmid 10692449] [evidence IDA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 10692449] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 8200] [pmid 10097176] [evidence TAS]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [pmid 10692449] [evidence IDA];  [goid 15459] [pmid 10097176] [evidence TAS]	MGC22431	MGC22431
Homo sapiens	RefSeq	NM_005832.3	ILMN_15690	KCNMB2	NM_005832.3	NM_005832.3		10242	31317293	NM_005832.3	KCNMB2	NP_005823.1	ILMN_1687331	0002030259	I	98	AACTGAGAGAAAGAGCAACAAAGCGGCGAGTGGTGTGAGAGGGCAGCACG	3	+	178276715-178276764	3q26.32c	Homo sapiens potassium large conductance calcium-activated channel, subfamily M, beta member 2 (KCNMB2), transcript variant 2, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 10692449] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal [goid 5513] [pmid 10692449] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10692449] [evidence IDA]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [pmid 10692449] [evidence IDA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 10692449] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 8200] [pmid 10097176] [evidence TAS]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [pmid 10692449] [evidence IDA];  [goid 15459] [pmid 10097176] [evidence TAS]	MGC22431	MGC22431
Homo sapiens	RefSeq	NM_005832.3	ILMN_15690	KCNMB2	NM_005832.3	NM_005832.3		10242	31317293	NM_005832.3	KCNMB2	NP_005823.1	ILMN_1792959	0005490040	A	1670	CACACCCCTTTTCCATTTAAGACCCTGCTACTGTGTGAAGAGATGATACT	3	+	178561388-178561437	3q26.32c	Homo sapiens potassium large conductance calcium-activated channel, subfamily M, beta member 2 (KCNMB2), transcript variant 2, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 10692449] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal [goid 5513] [pmid 10692449] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10692449] [evidence IDA]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [pmid 10692449] [evidence IDA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 10692449] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 8200] [pmid 10097176] [evidence TAS]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [pmid 10692449] [evidence IDA];  [goid 15459] [pmid 10097176] [evidence TAS]	MGC22431	MGC22431
Homo sapiens	RefSeq	NM_002345.3	ILMN_4223	LUM	NM_002345.3	NM_002345.3		4060	61742794	NM_002345.3	LUM	NP_002336.1	ILMN_2167805	0007400735	S	1655	CTGTCAAATGATGTGCAAAACCTTTTACTGGTTGCATGGAAATCAGCCAA	12	-	91497643-91497692	12q21.33c	Homo sapiens lumican (LUM), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 7665616] [evidence TAS]; Any collagen polymer in which collagen triple helices associate to form fibrils [goid 5583] [pmid 10734230] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10802664] [evidence TAS]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [pmid 10892350] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 10892350] [evidence NAS]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 10892350] [evidence IDA]	SLRR2D; LDC	SLRR2D; LDC
Homo sapiens	RefSeq	NM_002345.3	ILMN_4223	LUM	NM_002345.3	NM_002345.3		4060	61742794	NM_002345.3	LUM	NP_002336.1	ILMN_1790529	0002490364	S	1316	GCGTTTGGATGGCAATCGCATCTCAGAAACCAGTCTTCCACCGGATATGT	12	-	91497982-91498031	12q21.33c	Homo sapiens lumican (LUM), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 7665616] [evidence TAS]; Any collagen polymer in which collagen triple helices associate to form fibrils [goid 5583] [pmid 10734230] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10802664] [evidence TAS]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [pmid 10892350] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 10892350] [evidence NAS]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 10892350] [evidence IDA]	SLRR2D; LDC	SLRR2D; LDC
Homo sapiens	RefSeq	NM_001007561.1	ILMN_5031	IRGQ	NM_001007561.1	NM_001007561.1		126298	56090581	NM_001007561.1	IRGQ	NP_001007562.1	ILMN_1792955	0005820014	S	1988	TGCTGCAGGCTCTCGATGAGATGCGGGCTGATGCTGAGGCTGTGCTGGCA	19	-	48788038-48788087	19q13.31a	Homo sapiens immunity-related GTPase family, Q (IRGQ), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FKSG27; IRGQ1	FKSG27; IRGQ1
Homo sapiens	RefSeq	NM_002350.1	ILMN_10095	LYN	NM_002350.1	NM_002350.1		4067	4505054	NM_002350.1	LYN	NP_002341.1	ILMN_1781155	0007320551	S	2054	CCTCAGCAGCTGGTAATCTTGCTCTGCTTGACAACATCTGAGTGCAGCCG	8	+	57085442-57085491	8q12.1a	Homo sapiens v-yes-1 Yamaguchi sarcoma viral related oncogene homolog (LYN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10858437] [evidence EXP]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 11313396] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 3561390] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7650013] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence ISS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 42531] [evidence ISS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA];  [goid 4716] [pmid 10748115] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9020138] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7859737] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8753773] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ26625; JTK8	FLJ26625; JTK8
Homo sapiens	RefSeq	NR_029955.1	ILMN_387889	MIR448	NR_029955.1	NR_029955.1		554212	262205391	NR_029955.1	MIR448		ILMN_3309844	0006280546	S	46	TTCATATAAGAGGGGGCTGGCTGGTTGCATATGTAGGATGTCCCATCTCC				Xq23c	Homo sapiens microRNA 448 (MIR448), microRNA.					
Homo sapiens	RefSeq	NM_005065.3	ILMN_161998	SEL1L	NM_005065.3	NM_005065.3		6400	19923668	NM_005065.3	SEL1L	NP_005056.3	ILMN_1726496	0006350332	S	7568	TGGGCTTTGTACGTTCCTTCTCATGTCACTTACGTCACTACTTCGCCATC	14	-	81007881-81007930	14q31.1c	Homo sapiens sel-1 suppressor of lin-12-like (C. elegans) (SEL1L), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	IBD2; SEL1-LIKE; PRO1063	IBD2; SEL1-LIKE; PRO1063
Homo sapiens	RefSeq	XM_372268.3	ILMN_34997	LOC389904	XM_372268.3	XM_372268.3		389904	89060382	XM_372268.3	LOC389904	XP_372268.3	ILMN_1775367	0007650102	A	1790	AGAAGACCCCACTGCTTCCAGTGCACCCACTTCCCATTGACTGGTGAGGC	X	+	152405563-152405612	Xq28f	PREDICTED: Homo sapiens similar to Extracellular matrix protein 2 precursor (Matrix glycoprotein SC1/ECM2) (LOC389904), mRNA.					
Homo sapiens	RefSeq	NM_005446.2	ILMN_20460	P2RXL1	NM_005446.2	NM_005446.2		9127	38327545	NM_005446.2	P2RXL1	NP_005437.1	ILMN_1716335	0003170661	S	3232	CTGTCATGGAACCCTCCTTGCCTGGTGTGTGTGGCTCCCCTCTTCACTGG	22	+	19712797-19712846	22q11.21e	Homo sapiens purinergic receptor P2X-like 1, orphan receptor (P2RXL1), mRNA.				P2RX6; P2XM; MGC129625; P2X6	P2RX6; P2XM; MGC129625; P2X6
Homo sapiens	RefSeq	NM_000560.2	ILMN_19519	CD53	NM_000560.3	NM_000560.3		963	91106722	NM_000560.3	CD53	NP_000551.1	ILMN_1662843	0000520678	S	1206	CTCCCCAAAGTCAAGCAAGAGACTAGTTGAAGGGAGTTCTGGGGCCAGGC	1	+	111243720-111243769	1p13.3a	Homo sapiens CD53 molecule (CD53), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8452817] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8436422] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8404042] [evidence NAS]		MOX44; TSPAN25	TSPAN25; MOX44
Homo sapiens	RefSeq	NM_000560.3	ILMN_19519	CD53	NM_000560.3	NM_000560.3		963	91106722	NM_000560.3	CD53	NP_000551.1	ILMN_2413808	0000460102	A	1208	CCCCAAAGTCAAGCAAGAGACTAGTTGAAGGGAGTTCTGGGGCCAGGCTC	1	+	111243722-111243771	1p13.3a	Homo sapiens CD53 molecule (CD53), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8452817] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8436422] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8404042] [evidence NAS]		MOX44; TSPAN25	TSPAN25; MOX44
Homo sapiens	RefSeq	XM_944115.1	ILMN_45796	LOC650241	XM_944115.1	XM_944115.1		650241	89040603	XM_944115.1	LOC650241	XP_949208.1	ILMN_1762079	0001030491	S	701	TGCAGCAGAGCCCCCATCCCTCTTTCCGCCCAGGGATGCTGAAGGGAGCT					PREDICTED: Homo sapiens hypothetical protein LOC650241 (LOC650241), mRNA.					
Homo sapiens	RefSeq	XM_944778.1	ILMN_42876	LOC651586	XM_944778.1	XM_944778.1		651586	88989642	XM_944778.1	LOC651586	XP_949871.1	ILMN_1689936	0004920368	S	592	ATGACTTCCTCGTGGCAGCCTCATGATTCTGAGATCACAGCACGTGCATG					PREDICTED: Homo sapiens hypothetical protein LOC651586 (LOC651586), mRNA.					
Homo sapiens	RefSeq	NM_006227.2	ILMN_20706	PLTP	NM_182676.1	NM_182676.1		5360	33356540	NM_182676.1	PLTP	NP_872617.1	ILMN_1773389	0005690519	A	1315	TTGCCAAAGGGCTGCGAGAGGTGATTGAGAAGAACCGGCCTGCTGATGTC	20	-	44527621-44527670	20q13.12b	Homo sapiens phospholipid transfer protein (PLTP), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 7654777] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7654777] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	HDLCQ9	HDLCQ9
Homo sapiens	RefSeq	NM_006027.3	ILMN_25997	EXO1	NM_006027.3	NM_006027.3		9156	39995070	NM_006027.3	EXO1	NP_006018.3	ILMN_2351916	0002690458	A	2311	CCAAGCACAGCATTGCAGCAGTTCCGAAGAAAGAGCGATTCCCCCACCTC	1	+	240109035-240109084	1q43e	Homo sapiens exonuclease 1 (EXO1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11429708] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14676842] [evidence IDA]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 9788596] [evidence IPI]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 14636568] [evidence IDA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 9685493] [evidence ISS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 11809771] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 10364235] [evidence IGI]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IEA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11842105] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA in RNA-DNA hybrids to 5'-phosphomonoesters [goid 4523] [pmid 10364235] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14676842] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11429708] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12414623] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14676842] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15225546] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15886194] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788596] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10856833] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11427529] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11429708] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2414623] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a single-stranded DNA molecule [goid 45145] [pmid 10608837] [evidence IDA]; Catalysis of the cleavage of a flap structure in DNA, but not other DNA structures; processes the ends of Okazaki fragments in lagging strand DNA synthesis [goid 48256] [pmid 11842105] [evidence IDA]; Catalysis of the cleavage of a flap structure in DNA, but not other DNA structures; processes the ends of Okazaki fragments in lagging strand DNA synthesis [goid 48256] [pmid 10608837] [evidence IDA]; Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a double-stranded DNA molecule [goid 51908] [pmid 11842105] [evidence IDA]; Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a double-stranded DNA molecule [goid 51908] [pmid 10608837] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding [goid 43566] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding [goid 43566] [evidence IEA]	HEX1; hExoI	HEX1; hExoI
Homo sapiens	RefSeq	NM_003686.3	ILMN_25997	EXO1	NM_006027.3	NM_006027.3		9156	39995070	NM_006027.3	EXO1	NP_006018.3	ILMN_1673721	0001770646	A	2868	GAAACCCCTGTCCCCAGTCAGAGATAACATCCAACTAACTCCAGAAGCGG	1	+	240119417-240119466	1q43e	Homo sapiens exonuclease 1 (EXO1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11429708] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14676842] [evidence IDA]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 9788596] [evidence IPI]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 14636568] [evidence IDA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 9685493] [evidence ISS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 11809771] [evidence IMP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 10364235] [evidence IGI]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IEA]; An immune response dependent upon secreted immunoglobulin [goid 2455] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11842105] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA in RNA-DNA hybrids to 5'-phosphomonoesters [goid 4523] [pmid 10364235] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14676842] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11429708] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12414623] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14676842] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15225546] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15886194] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788596] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10856833] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11427529] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11429708] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2414623] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a single-stranded DNA molecule [goid 45145] [pmid 10608837] [evidence IDA]; Catalysis of the cleavage of a flap structure in DNA, but not other DNA structures; processes the ends of Okazaki fragments in lagging strand DNA synthesis [goid 48256] [pmid 11842105] [evidence IDA]; Catalysis of the cleavage of a flap structure in DNA, but not other DNA structures; processes the ends of Okazaki fragments in lagging strand DNA synthesis [goid 48256] [pmid 10608837] [evidence IDA]; Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a double-stranded DNA molecule [goid 51908] [pmid 11842105] [evidence IDA]; Catalysis of the sequential cleavage of mononucleotides from a free 5' terminus of a double-stranded DNA molecule [goid 51908] [pmid 10608837] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding [goid 43566] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with DNA of a specific structure or configuration e.g. triplex DNA binding or bent DNA binding [goid 43566] [evidence IEA]	HEX1; hExoI	HEX1; hExoI
Homo sapiens	RefSeq	XR_017366.2	ILMN_166561	LOC392008	XR_017366.2	XR_017366.2		392008	169170954	XR_017366.2	LOC392008		ILMN_3203976	0001740358	A	565	AAGGAGAACCTGAAGACCAAGAAGCGGCAGCGGAAGGAGAGGCTGTGCCT	7	-	27275521-27275570	7p15.2a	PREDICTED: Homo sapiens similar to hCG2010255 (LOC392008), mRNA.					
Homo sapiens	RefSeq	NM_138455.2	ILMN_7282	CTHRC1	NM_138455.2	NM_138455.2		115908	34147546	NM_138455.2	CTHRC1	NP_612464.1	ILMN_1725090	0004860546	S	693	AGGACTTTGTGAAGGAATTGGTGCTGGATTAGTGGATGTTGCTATCTGGG	8	+	104394690-104394739	8q22.3c	Homo sapiens collagen triple helix repeat containing 1 (CTHRC1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Homo sapiens	RefSeq	NM_138455.2	ILMN_7282	CTHRC1	NM_138455.2	NM_138455.2		115908	34147546	NM_138455.2	CTHRC1	NP_612464.1	ILMN_2117508	0004890689	S	755	CAGATTACCCAAAAGGAGATGCTTCTACTGGATGGAATTCAGTTTCTCGC	8	+	104394752-104394801	8q22.3c	Homo sapiens collagen triple helix repeat containing 1 (CTHRC1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Homo sapiens	RefSeq	NM_012184.3	ILMN_3404	FOXD4L1	NM_012184.3	NM_012184.3		200350	45580705	NM_012184.3	FOXD4L1	NP_036316.1	ILMN_2085441	0007100753	S	1845	CCCCCTTCTTCACTTCCTTGGAACTGGAAGTGTTATTCCTAAGTCTAGTG	2	+	113974975-113975024	2q14.1a	Homo sapiens forkhead box D4-like 1 (FOXD4L1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	bA395L14.1	bA395L14.1
Homo sapiens	RefSeq	XM_926093.1	ILMN_42302	LOC642621	XM_926093.1	XM_926093.1		642621	88942577	XM_926093.1	LOC642621	XP_931186.1	ILMN_1805747	0004670014	S	90	TTCCAAGGAGCTGTCTGCTATCCCTGGCTCCAATTCCTCTCCCCTTGAGC	1	+	30697556-30697605		PREDICTED: Homo sapiens hypothetical protein LOC642621 (LOC642621), mRNA.					
Homo sapiens	RefSeq	NM_032634.2	ILMN_9448	PIGO	NM_032634.2	NM_032634.2		84720	23397647	NM_032634.2	PIGO	NP_116023.2	ILMN_1673395	0005260563	I	2900	CTATGGTCACAGCCCTCACCCTGTTGGCCTTCCCACTTCTGCTGTTGCAT	9	-	35091330-35091379	9p13.3b	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class O (PIGO), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	RP11-182N22.4; DKFZp434M222; FLJ00135; MGC3079; MGC20536	RP11-182N22.4; DKFZp434M222; FLJ00135; MGC3079; MGC20536
Homo sapiens	RefSeq	XR_039592.1	ILMN_336408	LOC100129379	XR_039592.1	XR_039592.1		100129379	169180131	XR_039592.1	LOC100129379		ILMN_3178252	0004250133	A	56	CTGCGAAAATTCGGCCAGGGTTCTCCCTCTTGTCGCGTCTGTTCAAACCG	9	+	35582813-35582862	9p13.3b	PREDICTED: Homo sapiens misc_RNA (LOC100129379), miscRNA.					
Homo sapiens	RefSeq	XM_001724181.1	ILMN_344910	LOC100129663	XM_001724181.1	XM_001724181.1		100129663	169163054	XM_001724181.1	LOC100129663	XP_001724233.1	ILMN_3264387	0001340112	M	185	ATGGAGCTCCTCGAGGGTCTGACAAGAGGCTGAGTCCCAGCCAGGGCTTT	2	-	132295914-132295963	2q21.2a	PREDICTED: Homo sapiens hypothetical protein LOC100129663 (LOC100129663), mRNA.					
Homo sapiens	RefSeq	NM_018069.2	ILMN_18805	CEP192	NM_018069.2	NM_018069.2		55125	50811886	NM_018069.2	CEP192	NP_060539.2	ILMN_1797642	0004180754	I	4335	GGCCATCGTCTGCCTGGTAAAATAAGATCGCCTCCCCCTACGCCGTCTTG	18	+	13048419-13048468	18p11.21d	Homo sapiens centrosomal protein 192kDa (CEP192), transcript variant 2, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]				
Homo sapiens	RefSeq	NM_000301.1	ILMN_22981	PLG	NM_000301.1	NM_000301.1		5340	4505880	NM_000301.1	PLG	NP_000292.1	ILMN_1714446	0003450332	S	2262	TGGAAGAGTCCAATCCACCGAACTCTGTGCTGGGCATTTGGCCGGAGGCA	6	+	161093219-161093268	6q26a	Homo sapiens plasminogen (PLG), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2318848] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2962641] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 6216475] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11257124] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 1986355] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8910613] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 11257124] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43537] [pmid 11257124] [evidence TAS]; The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling [goid 48771] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots [goid 51918] [pmid 14726399] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The regrowth of lost or destroyed tissues [goid 42246] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 9242524] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an apolipoprotein, the protein component of a lipoprotein complex [goid 34185] [pmid 16480936] [evidence IPI]	DKFZp779M0222	DKFZp779M0222
Homo sapiens	RefSeq	XR_041979.1	ILMN_339387	LOC727818	XR_041979.1	XR_041979.1		727818	169163285	XR_041979.1	LOC727818		ILMN_3239188	0000730390	S	3779	CCTTTGCCCTTTCACCGGAGAGACATGGTGCCACTAAGAGTTGCGAAGGG	2	-	184823-184872	2p25.3g	PREDICTED: Homo sapiens similar to PRP38 pre-mRNA processing factor 38 (yeast) domain containing B (LOC727818), miscRNA.					
Homo sapiens	RefSeq	NM_015398.1	ILMN_20124	FAM149A	NM_015398.2	NM_015398.2		25854	144922678	NM_015398.2	FAM149A	NP_056213.1	ILMN_1786278	0000050463	A	1807	CGTCTTCGAGAAAGAACAGCCACCCTGGAACGGTTGTCAAGGCCCAGCAC	4	+	187088185-187088234	4q35.2a	Homo sapiens family with sequence similarity 149, member A (FAM149A), transcript variant 1, mRNA.				DKFZP564J102; MSTP119; MST119	MSTP119; MST119
Homo sapiens	Unigene	Hs.446266	ILMN_93150	HS.446266	Hs.446266		Hs.446266		20358455	BQ182905			ILMN_1866389	0003890441	S	545	TGTCAGTGCTGGAGGTATGAGTGCTGGGGGTCTCAGTGTTGGGGGTCTCA	6	-	169951437-169951486		UI-H-EU0-azk-k-10-0-UI.s1 NCI_CGAP_Car1 Homo sapiens cDNA clone IMAGE: 5849985 3, mRNA sequence					
Homo sapiens	RefSeq	XM_942233.1	ILMN_38315	LOC652663	XM_942233.1	XM_942233.1		652663	89076774	XM_942233.1	LOC652663	XP_947326.1	ILMN_1651453	0003610050	S	64	AGAGACTGCATCATCTGCTGCTCGGCCTATGACCTCTCCGGGCACCTGCC					PREDICTED: Homo sapiens hypothetical LOC652663 (LOC652663), mRNA.					
Homo sapiens	RefSeq	NM_001493.1	ILMN_13492	GDI1	NM_001493.1	NM_001493.1		2664	4503970	NM_001493.1	GDI1	NP_001484.1	ILMN_1734153	0000830653	S	2046	AGTGAGCCAAGCAGAAGGAGGTGGAAAACGGACCCAAACCCCAGTGTGCC	X	+	153324835-153324884	Xq28g	Homo sapiens GDP dissociation inhibitor 1 (GDI1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7543319] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	OPHN2; MRX48; RABGD1A; GDIL; XAP-4; RABGDIA; MRX41; FLJ41411	OPHN2; MRX48; RABGD1A; GDIL; XAP-4; RABGDIA; MRX41; FLJ41411
Homo sapiens	Unigene	Hs.571024	ILMN_123205	HS.571024	Hs.571024		Hs.571024		9099244	BE247487			ILMN_1840719	0003120739	S	188	TTGGAGCCTGAAGATGTGTGTGGCTGCCTTGTGGCTATGACGGCTGTGGC	5	+	157635484-157635485:157638244-157638291		TCBAP1E6464 Pediatric pre-B cell acute lymphoblastic leukemia Baylor-HGSC project=TCBA Homo sapiens cDNA clone TCBAP6464, mRNA sequence					
Homo sapiens	RefSeq	NM_001031698.1	ILMN_7167	PRPF40B	NM_001031698.1	NM_001031698.1		25766	72534685	NM_001031698.1	PRPF40B	NP_001026868.1	ILMN_1789593	0001570736	A	2561	CCAGGCTTTGGAATCAAGAAGGAGAAGACAGGCTGGGACACGTCAGAAAG	12	+	48324028-48324054:48324150-48324172	12q13.12c	Homo sapiens PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae) (PRPF40B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HYPC	HYPC
Homo sapiens	RefSeq	XM_944267.1	ILMN_40555	LOC650577	XM_944267.1	XM_944267.1		650577	88971013	XM_944267.1	LOC650577	XP_949360.1	ILMN_1772137	0003850019	S	2086	GGCCTCAAGTGTGCGCTGGGCATGTTATCTGCCTCACCATCCCTGTGTGA					PREDICTED: Homo sapiens hypothetical protein LOC650577 (LOC650577), mRNA.					
Homo sapiens	RefSeq	XM_496059.2	ILMN_38589	LOC440261	XM_496059.2	XM_496059.2		440261	89038158	XM_496059.2	LOC440261	XP_496059.1	ILMN_1684875	0004890132	A	526	TTGCTCATCCATAAGAAGCAACTCCCCAACTTGAGATTGTAGCAATTTAG	15	+	28847408-28847441:28847442-28847457		PREDICTED: Homo sapiens hypothetical LOC440261, transcript variant 1 (LOC440261), mRNA.					
Homo sapiens	RefSeq	XM_496059.2	ILMN_38589	LOC440261	XM_496059.2	XM_496059.2		440261	89038158	XM_496059.2	LOC440261	XP_496059.1	ILMN_1656110	0007380482	I	3	GAATCAACCCAAATGCCCATCAGTGATAGACTGGATAAAGAAAATATGGG	15	+	28815057-28815106		PREDICTED: Homo sapiens hypothetical LOC440261, transcript variant 1 (LOC440261), mRNA.					
Homo sapiens	RefSeq	XM_045705.9	ILMN_307679	ATXN3L	NR_003585.1	NR_003585.1		92552	149363705	NR_003585.1	ATXN3L		ILMN_1753450	0005900220	A	1413	CCAACAACAAGTTCGAGAGCAATTGAGAGTGATCTCAGTGATGACATCAG	X	-	13246985-13247034	Xp22.2	Homo sapiens ataxin 3-like (ATXN3L), non-coding RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MJDL	
Homo sapiens	Unigene	Hs.148448	ILMN_78681	HS.148448	Hs.148448		Hs.148448		5364371	AI798899			ILMN_1824465	0001430133	S	177	AGCAAGTGGGCTACAGGTAATCAGTCAATAGAGCTGGAGTGAAGACAGAG	4	-	119010317-119010366		we94a12.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2348734 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000785.3	ILMN_15226	CYP27B1	NM_000785.3	NM_000785.3		1594	74099700	NM_000785.3	CYP27B1	NP_000776.1	ILMN_1740418	0002900725	S	2256	ACCCCCTTCCTTCTTTGTCTTGCCCCTAGGAAGGTGAATCTGCCCTAGCC	12	-	58156298-58156347	12q14.1a	Homo sapiens cytochrome P450, family 27, subfamily B, polypeptide 1 (CYP27B1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9344864] [evidence NAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a vitamin, one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body [goid 9110] [pmid 9333115] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O [goid 4498] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	VDR; VDDRI; CP2B; CYP27B; PDDR; P450c1; CYP1alpha; VDDR; CYP1; VDD1	VDR; VDDRI; CP2B; CYP27B; PDDR; P450c1; CYP1alpha; VDDR; CYP1; VDD1
Homo sapiens	RefSeq	XM_932025.1	ILMN_33801	LOC644171	XM_932025.2	XM_932025.2		644171	113423467	XM_932025.2	LOC644171	XP_937118.1	ILMN_1655715	0006550364	S	7	GCAAGTTTAACCACGTTGCTCTAAAGCACTAGCCCCTTTCAGGTTTCGGA	12	-	102096527-102096576	12q23.2a	PREDICTED: Homo sapiens hypothetical LOC644171 (LOC644171), mRNA.					
Homo sapiens	RefSeq	XR_000552.1	ILMN_15401	LOC168474	NR_002789.1	NR_002789.1		168474	84872069	NR_002789.1	LOC168474		ILMN_1805396	0005340292	A	957	AACCCCTGGATTGTCCTGGGAAGAGTCACTACCACTGTCTGTCAGCCCAG	7	-	64313189-64313238	7q11.21c	Homo sapiens selenophosphate synthetase pseudogene (LOC168474), non-coding RNA.					
Homo sapiens	RefSeq	XM_374401.4	ILMN_161919	LOC340268	XM_294634.7	XM_294634.7		340268	113418399	XM_294634.7	LOC340268	XP_294634.7	ILMN_1675520	0003850372	S	121	TTTCGCGCGGGCGTGGAGGAAGTCATCAGCGTGACCATCTTTAACTCTCC	7	+	9732515-9732564	7p21.3c	PREDICTED: Homo sapiens similar to C3 and PZP-like, alpha-2-macroglobulin domain containing 8 (LOC340268), mRNA.			Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]		
Homo sapiens	RefSeq	NM_001002761.1	ILMN_9784	BPY2C	NM_001002761.1	NM_001002761.1		442868	50959142	NM_001002761.1	BPY2C	NP_001002761.1	ILMN_3235789	0004850255	S	241	TATGCCCAGCCTTCAAATAATACTACACTGTATAATTGGCTCAACACCCA	Y	-	27194621-27194670	Yq11.23a	Homo sapiens basic charge, Y-linked, 2C (BPY2C), mRNA.				VCY2; BPY2; VCY2C	VCY2; BPY2; VCY2C
Homo sapiens	RefSeq	XR_000668.1	ILMN_44640	CXORF30	XR_000668.2	XR_000668.2		652913	113430348	XR_000668.2	CXorf30		ILMN_1652429	0000360671	S	61	TTTCTTCCTCTCCAATCTGGACGCTACCCTTGTAAAATTTTATTGAAATC					PREDICTED: Homo sapiens chromosome X open reading frame 30 (CXorf30), mRNA.					
Homo sapiens	RefSeq	NM_001633.2	ILMN_13910	AMBP	NM_001633.2	NM_001633.2		259	31541901	NM_001633.2	AMBP	NP_001624.1	ILMN_1695446	0004900433	S	847	GCTACCCCAAGAAGAGGAAGGATCAGGGGGTGGGCAACTGGTAACTGAAG	9	-	115864792-115864841	9q32d	Homo sapiens alpha-1-microglobulin/bikunin precursor (AMBP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11877257] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12817471] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9570066] [evidence NAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 10097787] [evidence NAS]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 42167] [pmid 11877257] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46329] [pmid 12817471] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50777] [pmid 10097787] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The inhibition of the passage of calcium ions through a calcium channel; the function of some venoms [goid 19855] [pmid 12817471] [evidence NAS]; Interacting selectively with an immunoglobulin of an IgA isotype [goid 19862] [pmid 11877257] [evidence IDA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [pmid 11877257] [evidence IDA]; Stops, prevents or reduces the activity of the serine endopeptidase trypsin [goid 30304] [pmid 12817471] [evidence TAS]; Stops, prevents or reduces the activity of the serine endopeptidase plasmin [goid 30568] [pmid 12817471] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11883904] [evidence IPI]; Interacting selectively with calcium oxalate, CaC2O4, a salt of oxalic acid. In animals, it may be excreted in urine or retained in the form of urinary calculi [goid 46904] [pmid 14516400] [evidence NAS]	UTI; HCP; ITI; ITIL	UTI; HCP; ITI; ITIL
Homo sapiens	RefSeq	NM_012152.1	ILMN_18518	EDG7	NM_012152.1	NM_012152.1		23566	6912347	NM_012152.1	EDG7	NP_036284.1	ILMN_1709719	0002140193	S	1007	GCATCCCCTCCACAGTCCTCAGCAGGAGTGACACAGGCAGCCAGTACATA	1	-	85052161-85052210	1p22.3f	Homo sapiens endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 7 (EDG7), mRNA.				RP4-678I3; GPCR; LP-A3; Edg-7; HOFNH30; LPAR3; LPA3	RP4-678I3; GPCR; LP-A3; Edg-7; HOFNH30; LPAR3; LPA3
Homo sapiens	RefSeq	NM_001003745.1	ILMN_19357	OR10A3	NM_001003745.1	NM_001003745.1		26496	53793657	NM_001003745.1	OR10A3	NP_001003745.1	ILMN_1716448	0006620270	S	524	ATCATCTCTTCTGTGAGACTCCCCCGGTACTAGAGCTTGTGTGTGCAGAC	11	-	7960494-7960543	11p15.4b	Homo sapiens olfactory receptor, family 10, subfamily A, member 3 (OR10A3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 1370859] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 1370859] [evidence NAS]	HSHTPCRX12; HTPCRX12	HSHTPCRX12; HTPCRX12
Homo sapiens	RefSeq	XM_001724860.1	ILMN_349695	LOC100130431	XM_001724860.1	XM_001724860.1		100130431	169202295	XM_001724860.1	LOC100130431	XP_001724912.1	ILMN_3269951	0002190747	M	556	AACAGGCAGCTGCAGGAAAATGGCGGCGCCAGGCTCCTCCTCGGAGCTTT	11	+	85457751-85457800	11q14.2a	PREDICTED: Homo sapiens hypothetical protein LOC100130431 (LOC100130431), mRNA.					
Homo sapiens	RefSeq	NM_000216.1	ILMN_178537	KAL1	NM_000216.2	NM_000216.2		3730	119395745	NM_000216.2	KAL1	NP_000207.2	ILMN_1750373	0006620008	S	5906	GTGTCAGGTACGGAGAGGATTCTCATGACTGTCTTACCTCTACTGAATAT	X	-	8498485-8498534	Xp22.31b	Homo sapiens Kallmann syndrome 1 sequence (KAL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 8832397] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8842728] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 1922361] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 8842728] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 1922361] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 1913827] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 1922361] [evidence TAS]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 8842728] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KAL; KMS; HHA; ADMLX; KALIG-1	KAL; KMS; HHA; ADMLX; KALIG-1
Homo sapiens	RefSeq	NM_015380.3	ILMN_29300	SAMM50	NM_015380.3	NM_015380.3		25813	34222323	NM_015380.3	SAMM50	NP_056195.2	ILMN_1671932	0005080458	S	1527	GTGATGGCGTCCAGTTTGGAGCTGGGATAAGGTTCCTGTAGCCGACACCC	22	+	42723556-42723596:42723597-42723605	22q13.31a	Homo sapiens sorting and assembly machinery component 50 homolog (S. cerevisiae) (SAMM50), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites [goid 19867] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites [goid 19867] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	OMP85; TOB55; YNL026W; CGI-51; SAM50; TRG-3	OMP85; TOB55; YNL026W; CGI-51; SAM50; TRG-3
Homo sapiens	Unigene	Hs.545230	ILMN_108477	HS.545230	Hs.545230		Hs.545230		13712521	BG190834			ILMN_1849148	0001980053	S	191	AACCTGAACGCAGGTGCTGCCCAAAGAGGGGGCGGAGGGAAAGACGCTTT	8	+	128815586-128815635		RST9912 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_002747.2	ILMN_139393	MAPK4	NM_002747.2	NM_002747.2		5596	6715608	NM_002747.2	MAPK4	NP_002738.1	ILMN_1685886	0004810379	S	3713	GCTCCTTCTCTTCCCCCAACACTCCCAAAGATACCCACAGAAGTCCAGCC	18	+	46511680-46511729	18q21.1g-q21.2a	Homo sapiens mitogen-activated protein kinase 4 (MAPK4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7969157] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 7969157] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p63MAPK; Erk4; ERK3; PRKM4	Erk4; p63MAPK; ERK3; PRKM4
Homo sapiens	RefSeq	NM_002626.4	ILMN_25945	PFKL	NM_002626.4	NM_002626.4		5211	50346003	NM_002626.4	PFKL	NP_002617.3	ILMN_1713037	0005570242	A	2711	CTCAGCGTCTCCCCATGCTGGGCTCACTACATGGGCCAGCCCTTGCTCTA	21	+	44571482-44571531	21q22.3d	Homo sapiens phosphofructokinase, liver (PFKL), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 6444721] [evidence EXP]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [pmid 6444721] [evidence IDA]	The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism [goid 6002] [pmid 6444721] [evidence IDA]; Any process that modulates the frequency, rate or extent of glycolysis [goid 6110] [pmid 6444721] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [pmid 6444721] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ40909; DKFZp686G1648; PFK-B; FLJ30173; DKFZp686L2097	FLJ40909; DKFZp686G1648; PFK-B; FLJ30173; DKFZp686L2097
Homo sapiens	RefSeq	NM_018101.2	ILMN_13462	CDCA8	NM_018101.2	NM_018101.2		55143	51593099	NM_018101.2	CDCA8	NP_060571.1	ILMN_1709294	0004830634	S	1903	TGTGACTTGCTTGGTGGCCTCATTCCATGTGTGCCTGTGCCTGGGGCATG	1	+	37947578-37947627	1p34.3b	Homo sapiens cell division cycle associated 8 (CDCA8), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16239925] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291752] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16239925] [evidence IPI]	FLJ12042; FLJ10468; BOR	FLJ12042; FLJ10468; BOR
Homo sapiens	Unigene	Hs.373429	ILMN_88321	HS.373429	Hs.373429		Hs.373429		20406823	BQ225423			ILMN_1862684	0005670270	S	397	GCCTCCCCAGTCTTGAAGGCAACGCTACAGGTTCCTGGCTTCTCCATTTG	4	-	122267805-122267854		AGENCOURT_7256933 NIH_MGC_68 Homo sapiens cDNA clone IMAGE:5773707 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001714618.1	ILMN_352722	LOC100134530	XM_001714618.1	XM_001714618.1		100134530	169170424	XM_001714618.1	LOC100134530	XP_001714670.1	ILMN_3249327	0001030707	S	329	GCTCCTGCCTCCCGGCAGACTCTGCAGGCCCAAGTCGTCCTCAAGTCAGC	7	+	62559696-62559745		PREDICTED: Homo sapiens hypothetical protein LOC100134530 (LOC100134530), mRNA.					
Homo sapiens	RefSeq	NM_007326.2	ILMN_16364	CYB5R3	NM_000398.4	NM_000398.4		1727	70908370	NM_000398.4	CYB5R3	NP_000389.1	ILMN_1740441	0004260010	A	1585	GGGCCCTCCCAGAACCTCAGCATTTCCTTCCAGCCCATCCAAACACTGAG	22	-	41345078-41345127	22q13.2b	Homo sapiens cytochrome b5 reductase 3 (CYB5R3), transcript variant M, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9207238] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [pmid 1400360] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9207238] [evidence TAS]	The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 1400360] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [pmid 1400360] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DIA1; B5R	DIA1; B5R
Homo sapiens	RefSeq	NM_003898.2	ILMN_8732	SYNJ2	NM_003898.2	NM_003898.2		8871	52851404	NM_003898.2	SYNJ2	NP_003889.1	ILMN_2215119	0004200593	S	6217	GAGTTTGGGGGAGAGAGCAAGATGGGTTCCTTGGAGAAGCTGATTTGCCA	6	+	158438833-158438882	6q25.3d	Homo sapiens synaptojanin 2 (SYNJ2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0348; INPP5H; MGC44422	KIAA0348; INPP5H; MGC44422
Homo sapiens	RefSeq	NM_206826.1	ILMN_10491	GNL3	NM_206826.1	NM_206826.1		26354	45643128	NM_206826.1	GNL3	NP_996562.1	ILMN_2324056	0005270167	A	1129	GCTGCCAGTGCCATCCTTTCCCAGGCTGATGCTCGACAGGTAGTACTGAA	3	+	52702064-52702102:52702243-52702253	3p21.1d	Homo sapiens guanine nucleotide binding protein-like 3 (nucleolar) (GNL3), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]	Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence ISS]	C77032; NS; MGC800; E2IG3	C77032; NS; MGC800; E2IG3
Homo sapiens	RefSeq	NM_001080427.1	ILMN_171101	THSD7B	NM_001080427.1	NM_001080427.1		80731	122937256	NM_001080427.1	THSD7B	NP_001073896.1	ILMN_2108590	0001190553	S	5524	ATATAGCATTAACCACACACAGTTGTAATTCAGTTTAATGATGACAAACT	2	+	138037326-138037375	2q22.1a-q22.1b	Homo sapiens thrombospondin, type I, domain containing 7B (THSD7B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA1679	KIAA1679
Homo sapiens	RefSeq	XM_937523.1	ILMN_171101	THSD7B	NM_001080427.1	NM_001080427.1		80731	122937256	NM_001080427.1	THSD7B	NP_001073896.1	ILMN_1713873	0002680008	A	5317	GCCAGGGGATGATGGCGCTTCATGGGTTGCAGCTACTGAAAATAGCAGCG	2	+	138030195-138030232:138033493-138033504	2q22.1a-q22.1b	Homo sapiens thrombospondin, type I, domain containing 7B (THSD7B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA1679	
Homo sapiens	Unigene	Hs.178244	ILMN_80597	HS.178244	Hs.178244		Hs.178244		2162139	AA448469			ILMN_1901089	0002750093	S	325	CATAAATCAGTGCCCGAAGAGCAGGAAGCAGCAGAGCCCATGAGGGTGGC	10	-	43729583-43729616:43729619-43729634		zw80a10.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:782490 3, mRNA sequence					
Homo sapiens	RefSeq	NM_153206.1	ILMN_14597	AMICA1	NM_153206.1	NM_153206.1		120425	23397450	NM_153206.1	AMICA1	NP_694938.1	ILMN_1778723	0001580465	S	1639	CTCTCCTGTGTGTGTCCTGGGCCACTCTACCAGTGATTTCAGACTCCCGC	11	-	117570158-117570207	11q23.3d	Homo sapiens adhesion molecule, interacts with CXADR antigen 1 (AMICA1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15800062] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC118814; AMICA; FLJ37080; CREA7-4; JAML; Gm638; CREA7-1; MGC118815	MGC118814; AMICA; FLJ37080; CREA7-4; JAML; Gm638; CREA7-1; MGC118815
Homo sapiens	RefSeq	XM_937276.1	ILMN_42598	LOC648230	XM_937276.1	XM_937276.1		648230	88954680	XM_937276.1	LOC648230	XP_942369.1	ILMN_1698712	0002260762	S	6	GACCCGCAAAACATTCTGTGACATCACCGGTACCCAAGGGCCCTCTGAGA				2p25.3c	PREDICTED: Homo sapiens similar to EF-hand calcium binding domain 5 (LOC648230), mRNA.					
Homo sapiens	RefSeq	NR_002790.2	ILMN_13008	PER4	NR_002790.2	NR_002790.2		168741	142358069	NR_002790.2	PER4		ILMN_3248570	0000610327	S	1011	GGCATCAACCAGGCATCTTGAAATGTAGTCCCCATGGTTAAGGGCAGGCT	7	+	9641435-9641484	7p21.3c	Homo sapiens period 4 pseudogene (PER4), non-coding RNA.					
Homo sapiens	RefSeq	XM_928179.1	ILMN_40961	LOC653576	XM_928179.1	XM_928179.1		653576	89038722	XM_928179.1	LOC653576	XP_933272.1	ILMN_1671674	0006180270	S	431	TGCTGAAAGCGCAGCTGACACAGATCCAAGGTCTAGGCTGCCTCTGCTGA	15	+	52923-52945:53589-53615		PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC653576), mRNA.					
Homo sapiens	RefSeq	NM_000432.1	ILMN_26696	MYL2	NM_000432.1	NM_000432.1		4633	4557774	NM_000432.1	MYL2	NP_000423.1	ILMN_1688417	0001260463	S	438	CCAGATGTTCGCCGCCTTCCCCCCTGACGTGACTGGAAACTTGGACTACA	12	-	109833309-109833358	12q24.11d	Homo sapiens myosin, light polypeptide 2, regulatory, cardiac, slow (MYL2), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [pmid 16754800] [evidence TAS]	Any process that modulates the frequency, rate or extent of striated muscle contraction [goid 6942] [pmid 8673105] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 15824735] [evidence IMP]; Process by which a cell becomes capable of differentiating autonomously into a muscle cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42694] [evidence IEA]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IEA]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [pmid 8673105] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [pmid 9180271] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 11102452] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16555005] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8673105] [evidence TAS]; Interacting selectively with a heavy chain of a myosin complex [goid 32036] [pmid 8287067] [evidence NAS]	CMH10; MLC2	CMH10; MLC2
Homo sapiens	RefSeq	NM_000409.2	ILMN_20254	GUCA1A	NM_000409.2	NM_000409.2		2978	40254414	NM_000409.2	GUCA1A	NP_000400.2	ILMN_1662086	0004230139	S	1646	AGTGCTGCAATCACACATCCATTCTGCCCTGGGGGACCCTGGAGCCTACT	6	+	42255544-42255593	6p21.1f	Homo sapiens guanylate cyclase activator 1A (retina) (GUCA1A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7983048] [evidence NAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9425234] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; Any process that modulates the frequency, rate or extent of guanylate cyclase activity [goid 31282] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA];  [goid 8048] [pmid 9425234] [evidence TAS]; Modulates the activity of guanylate cyclase [goid 30249] [evidence IEA]	GUCA; GCAP1; GUCA1; GCAP; COD3	GUCA; GCAP1; GUCA1; GCAP; COD3
Homo sapiens	RefSeq	XR_019517.2	ILMN_166887	LOC391039	XR_019517.2	XR_019517.2		391039	169161582	XR_019517.2	LOC391039		ILMN_3290248	0005690497	M	673	GCCCCTGAGTCTGCACCCCTTTAGAGCAAAATAATCTATGCCAGCTCCAA				1p32.3e	PREDICTED: Homo sapiens misc_RNA (LOC391039), miscRNA.					
Homo sapiens	RefSeq	XM_937101.1	ILMN_138481	LOC648050	XM_937101.1	XM_937101.1		648050	88980359	XM_937101.1	LOC648050	XP_942194.1	ILMN_1707930	0002340504	S	1090	CACCCGAGTGCTTTCGGCTCTCTGGCCACTGTCCTTACTCTGTACATGGG					PREDICTED: Homo sapiens hypothetical protein LOC648050 (LOC648050), mRNA.					
Homo sapiens	RefSeq	NM_005285.3	ILMN_26955	NPBWR1	NM_005285.3	NM_005285.3		2831	53850800	NM_005285.3	NPBWR1	NP_005276.2	ILMN_1752681	0004210452	S	634	TTCGCCATCCCCGTGTCCACCATCTGTGTCCTCTATACCACCCTGCTGTG	8	+	53853101-53853150	8q11.23b	Homo sapiens neuropeptides B/W receptor 1 (NPBWR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12401809] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 12401809] [evidence IDA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 7590751] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an opioid, any narcotic derived from or resembling opium, to initiate a change in cell activity [goid 4985] [pmid 7590751] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12401809] [evidence IPI]	GPR7; MGC129755	GPR7; MGC129755
Homo sapiens	RefSeq	NM_145068.2	ILMN_17560	TRPV3	NM_145068.2	NM_145068.2		162514	22027467	NM_145068.2	TRPV3	NP_659505.1	ILMN_1802901	0000610253	S	3090	CCGTCAGCCCCAACCCCAGCCCACACATTGTACCATCTCTTCTGCTGTGA	17	-	3416766-3416815	17p13.3a	Homo sapiens transient receptor potential cation channel, subfamily V, member 3 (TRPV3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [evidence IEA]	Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	VRL3	VRL3
Homo sapiens	RefSeq	XM_942536.1	ILMN_31705	LOC651143	XM_942536.1	XM_942536.1		651143	89057458	XM_942536.1	LOC651143	XP_947629.1	ILMN_1690063	0001710349	I	3	AGAATGAGGACTGCGAAGGAGAACGCAGCAAGCCCAGGCGGCGGTGGAAA					PREDICTED: Homo sapiens hypothetical protein LOC651143, transcript variant 1 (LOC651143), mRNA.					
Homo sapiens	RefSeq	NM_000439.3	ILMN_178294	PCSK1	NM_000439.3	NM_000439.3		5122	20336241	NM_000439.3	PCSK1	NP_000430.3	ILMN_1710859	0007200609	S	4248	GTAGAGGGTGTTTGCAGAGCAATGCCCGTAATGCTTAGAGAATGTTCTCC	5	-	95753457-95753506	5q15d	Homo sapiens proprotein convertase subtilisin/kexin type 1 (PCSK1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8397508] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9207799] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9207799] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [pmid 9207799] [evidence TAS]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PC3; NEC1; PC1; SPC3	PC3; NEC1; PC1; SPC3
Homo sapiens	RefSeq	NM_000439.3	ILMN_178294	PCSK1	NM_000439.3	NM_000439.3		5122	20336241	NM_000439.3	PCSK1	NP_000430.3	ILMN_2081813	0000520176	S	4977	GTAGCTGAGTTTAACATGTGTGGTCTTGGTATTCTTAAGGGAACTTCCAC	5	-	95752728-95752777	5q15d	Homo sapiens proprotein convertase subtilisin/kexin type 1 (PCSK1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8397508] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9207799] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9207799] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [pmid 9207799] [evidence TAS]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PC3; NEC1; PC1; SPC3	PC3; NEC1; PC1; SPC3
Homo sapiens	RefSeq	NM_006777.3	ILMN_12472	ZBTB33	NM_006777.3	NM_006777.3		10009	41152068	NM_006777.3	ZBTB33	NP_006768.1	ILMN_1673138	0004290615	S	5036	GCACTGGCTTTCTGGCTGGTCAACTATATGAAACCTTGTTCATTCCTCCG	X	+	119276106-119276155	Xq24d	Homo sapiens zinc finger and BTB domain containing 33 (ZBTB33), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10207085] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10207085] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10207085] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF348; ZNF-kaiso	ZNF348; ZNF-kaiso
Homo sapiens	RefSeq	NM_020214.1	ILMN_5230	PARP6	NM_020214.1	NM_020214.1		56965	19482155	NM_020214.1	PARP6	NP_064599.1	ILMN_1813620	0001170102	I	140	CATCTCGTTGGCCTTGGTTCGGCTAGTGGTATGGAGGGGTGCTGCCTAGC	15	-	70346906-70346955	15q23b	Homo sapiens poly (ADP-ribose) polymerase family, member 6 (PARP6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Homo sapiens	RefSeq	NR_002972.1	ILMN_167060	SNORA39	NR_002972.1	NR_002972.1		677821	91680837	NR_002972.1	SNORA39		ILMN_3245764	0003830343	S	28	TGCCCGTGTCCTGGTCATTGGTAGTGCAGGCAGAGGAAATGCGGGAAAGG	20	+	36510167-36510216	20q11.23c	Homo sapiens small nucleolar RNA, H/ACA box 39 (SNORA39), small nucleolar RNA.				ACA39	ACA39
Homo sapiens	RefSeq	XM_940612.1	ILMN_30640	DCAMKL3	XM_940612.1	XM_940612.1		85443	88968992	XM_940612.1	DCAMKL3	XP_945705.1	ILMN_1762701	0006550162	A	5084	ACTGACCTTACCAACTACTAGCGAGGATGCAGAGTGACTGGAACTTCCCG				3p22.2b	PREDICTED: Homo sapiens doublecortin and CaM kinase-like 3 (DCAMKL3), mRNA.					
Homo sapiens	RefSeq	NM_005741.3	ILMN_13327	ZNF263	NM_005741.3	NM_005741.3		10127	34222305	NM_005741.3	ZNF263	NP_005732.2	ILMN_1692620	0002510332	S	3022	GGTGGAATTTGCAGGTCAGCCCAGGAATTGGCAGAGGAAGTAGGTGTCTG	16	+	3281197-3281246	16p13.3c	Homo sapiens zinc finger protein 263 (ZNF263), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9256059] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9256059] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZKSCAN12; FPM315	ZKSCAN12; FPM315
Homo sapiens	RefSeq	XM_933983.1	ILMN_173731	LOC730099	XR_015792.1	XR_015792.1		730099	113426018	XR_015792.1	LOC730099		ILMN_1809303	0004230138	S	46	ATTAAGCGTTCGGGAGAAAAGTGTGTGGCCGCACTAGTGGAGATCCCCGC	16	+	22353579-22353584:22355719-22355762	16p12.1c	PREDICTED: Homo sapiens similar to PI-3-kinase-related kinase SMG-1 (LOC730099), mRNA.					
Homo sapiens	RefSeq	XM_927739.1	ILMN_30810	LOC644621	XM_927739.1	XM_927739.1		644621	89060234	XM_927739.1	LOC644621	XP_932832.1	ILMN_1780117	0004640100	S	181	ACAACTGTGCAGGGAGTTGTCACAAGTTTCTGTGGTGATTATGGCGTGAT	X	-	134154615-134154664		PREDICTED: Homo sapiens similar to Protein CXorf48 (Tumor antigen BJ-HCC-20) (LOC644621), mRNA.					
Homo sapiens	RefSeq	NM_003145.2	ILMN_5589	SSR2	NM_003145.3	NM_003145.3		6746	115430253	NM_003145.3	SSR2	NP_003136.1	ILMN_1783226	0004280041	A	470	GGGAGGAATCCTGGCTCAGCGGGAGTTTGACAGGCGATTCTCCCCTCATT	1	-	155981602-155981651	1q22c	Homo sapiens signal sequence receptor, beta (translocon-associated protein beta) (SSR2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 7789174] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7789174] [evidence TAS]	The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria [goid 6613] [pmid 7789174] [evidence TAS]	Interacting selectively with a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized [goid 5048] [pmid 7789174] [evidence TAS]	HSD25; DKFZp686F19123; TRAPB; TLAP	HSD25; DKFZp686F19123; TRAPB; TLAP
Homo sapiens	RefSeq	NM_052918.3	ILMN_181700	SORCS1	NM_052918.3	NM_052918.3		114815	61743972	NM_052918.3	SORCS1	NP_443150.3	ILMN_1665492	0005820673	I	3445	AAAGAGCAAGACACGCCACTCCGCCTTCAACGCCAAAGCGGGGATCTGCT	10	-	108434828-108434877	10q25.1c	Homo sapiens sortilin-related VPS10 domain containing receptor 1 (SORCS1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 12482870] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 11499680] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12482870] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12482870] [evidence IPI]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [pmid 11499680] [evidence NAS]	FLJ41758; FLJ43475; FLJ44957	FLJ41758; FLJ43475; FLJ44957
Homo sapiens	RefSeq	NR_003245.1	ILMN_181752	HAR1B	NR_003245.1	NR_003245.1		768097	116089271	NR_003245.1	HAR1B		ILMN_3240360	0002850408	S	512	CCTGGAGACTGCCCTCACTCAACACTTGAACAAGCAAGGGGCCAGGTTCA	20	-	61727179-61727228	20q13.33d	Homo sapiens highly accelerated region 1B (non-protein coding) (HAR1B), non-coding RNA.				HAR1R	HAR1R
Homo sapiens	RefSeq	NM_153235.2	ILMN_7381	TXLNB	NM_153235.2	NM_153235.2		167838	60685215	NM_153235.2	TXLNB	NP_694967.2	ILMN_2107482	0006280014	S	4197	GTCTGAATATTTAGCAAGAGAAACAGGCAGCAGAGGAACCCAAAGGCAGT	6	-	139603277-139603326	6q24.1a	Homo sapiens taxilin beta (TXLNB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]			dJ522B19.2; LST001; DKFZp451A175; MDP77; C6orf198	dJ522B19.2; LST001; DKFZp451A175; MDP77; C6orf198
Homo sapiens	RefSeq	NM_005232.3	ILMN_26326	EPHA1	NM_005232.3	NM_005232.3		2041	56119206	NM_005232.3	EPHA1	NP_005223.3	ILMN_1664265	0006370553	S	3119	CTAGGCTATCGGTGCTGCTTCTGCCCACTTTCAGGAGAACCCTGCTCTGC	7	-	142798521-142798570	7q34f-q35a	Homo sapiens EPH receptor A1 (EPHA1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2825356] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2825356] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	EPHT; MGC163163; EPHT1; EPH	EPHT; MGC163163; EPHT1; EPH
Homo sapiens	RefSeq	XM_001713666.1	ILMN_346919	PRAMEF3	XM_001713666.1	XM_001713666.1		401940	169161853	XM_001713666.1	PRAMEF3	XP_001713718.1	ILMN_3227049	0000840471	A	1602	AAATTTGAGACAGGGTTTCCCTATGTTGTCCAGGCTGGTCTCAAACTCTT				1p36.21d	PREDICTED: Homo sapiens PRAME family member 3 (PRAMEF3), mRNA.					
Homo sapiens	Unigene	Hs.565086	ILMN_117627	HS.565086	Hs.565086		Hs.565086		11597557	BF512455			ILMN_1897911	0003840576	S	103	AGAGAGTCAGGATTAAAAGGCTGGAGGGGCAGAGGAGGCCAGCACAGGAG	17	+	10666030-10666079		UI-H-BI3-alw-d-07-0-UI.s1 NCI_CGAP_Sub5 Homo sapiens cDNA clone IMAGE:3068964 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001128582.1	ILMN_164558	FAM72D	XM_001128582.1	XM_001128582.1		728833	113411119	XM_001128582.1	FAM72D	XP_001128582.1	ILMN_3235790	0003310224	S	2	ATTCAAACTGATACCGGGTTGGAGAGGCAGGAAAAGCGGAAGAGGGAGCG	1	-	142624460-142624509	1q21.1a	PREDICTED: Homo sapiens family with sequence similarity 72, member D (FAM72D), mRNA.					
Homo sapiens	RefSeq	NM_004251.3	ILMN_17284	RAB9A	NM_004251.3	NM_004251.3		9367	34147553	NM_004251.3	RAB9A	NP_004242.1	ILMN_1750409	0002940451	S	907	GTTGCTGCTTCATTAGTTGGTGGGAGAAGGGACACATCCACTCTTGGAGG	X	+	13637511-13637560	Xp22.2	Homo sapiens RAB9A, member RAS oncogene family (RAB9A), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 15078902] [evidence IDA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [pmid 15078902] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9126495] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAB9	RAB9
Homo sapiens	RefSeq	XM_939340.1	ILMN_39784	LOC650243	XM_939340.1	XM_939340.1		650243	88987222	XM_939340.1	LOC650243	XP_944433.1	ILMN_1729219	0000940142	S	1759	ATCTGCGCAGTGCTTGCTTCTTGGTGAAAGACAGGGCAGGTCCACATCCA					PREDICTED: Homo sapiens hypothetical protein LOC650243 (LOC650243), mRNA.					
Homo sapiens	RefSeq	XM_942919.1	ILMN_137834	CRSP2	XM_942919.1	XM_942919.1		9282	89060697	XM_942919.1	CRSP2	XP_948012.1	ILMN_1739956	0006370563	I	4545	GAGGTCTGGTTGCCGTGGCCCTCTTAATGTCTGCCTGTCGCTTTCTTCCT				Xp11.4b	PREDICTED: Homo sapiens cofactor required for Sp1 transcriptional activation, subunit 2, 150kDa, transcript variant 6 (CRSP2), mRNA.					
Homo sapiens	RefSeq	XM_946214.1	ILMN_138166	RBM19	XM_946214.1	XM_946214.1		9904	89036342	XM_946214.1	RBM19	XP_951307.1	ILMN_1790012	0004390673	I	3	CCCCAGGGCTCTGGTGGGTTTGACATTATTTCATGGATTTGATGTTTTTG				12q24.13b-q24.21a	PREDICTED: Homo sapiens RNA binding motif protein 19, transcript variant 4 (RBM19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	XR_041533.1	ILMN_349103	FLJ43859	XR_041533.1	XR_041533.1		389761	169217483	XR_041533.1	FLJ43859		ILMN_3269339	0000460735	M	1133	GCAAACTAGAGTGGCAGCACATCCATCAGCAGCCCCCATATTCTAAGTGT				9q21.32a	PREDICTED: Homo sapiens misc_RNA (FLJ43859), miscRNA.					
Homo sapiens	RefSeq	XM_928061.1	ILMN_43625	LOC653559	XM_928061.1	XM_928061.1		653559	89044177	XM_928061.1	LOC653559	XP_933154.1	ILMN_1814311	0006770066	S	308	CACCCAGGTGATGCAACTCTTCTCTGTGCTCTGCCTACAGGGTACATTGT	18	+	99378-99427		PREDICTED: Homo sapiens similar to Rho-associated protein kinase 1 (Rho-associated, coiled-coil containing protein kinase 1) (p160 ROCK-1) (p160ROCK) (LOC653559), mRNA.					
Homo sapiens	RefSeq	XM_001718366.1	ILMN_345387	LOC100130324	XM_001718366.1	XM_001718366.1		100130324	169166329	XM_001718366.1	LOC100130324	XP_001718418.1	ILMN_3188500	0005220463	A	181	GAAACCACAGAGAAAGAACCCGCGGGAGGAAGAAAGCGCCCCAGACCCCG	4	+	143987509-143987558	4q31.21c	PREDICTED: Homo sapiens hypothetical protein LOC100130324 (LOC100130324), mRNA.					
Homo sapiens	RefSeq	NM_030572.1	ILMN_21610	C12ORF39	NM_030572.2	NM_030572.2		80763	142378186	NM_030572.2	C12orf39	NP_085049.1	ILMN_1763311	0001820671	S	347	CGGCCACTGCCGGAAAGACGAAGCCCAAATCCCCAACTACTAACTATTCC	12	+	21571978-21571990:21573202-21573238	12p12.1e	Homo sapiens chromosome 12 open reading frame 39 (C12orf39), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC10946	MGC10946
Homo sapiens	RefSeq	XM_936543.1	ILMN_43601	LOC647479	XM_936543.1	XM_936543.1		647479	89025771	XM_936543.1	LOC647479	XP_941636.1	ILMN_1687371	0006560673	S	121	AGCATCCCTAACACTGAGGAATCCTATAAATGTGATGTATGTGAGAAAGT					PREDICTED: Homo sapiens similar to zinc finger protein 655 isoform a (LOC647479), mRNA.					
Homo sapiens	Unigene	Hs.97558	ILMN_74361	HS.97558	Hs.97558		Hs.97558		2052559	AA399555			ILMN_1885478	0004280750	S	53	GTCATCAGGTGCAGGACTGGGGTCAGGAAAGGGCAAGGACTTTGTGTGGC	9	-	33653110-33653159		zt88c07.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:729420 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001724022.1	ILMN_342055	LOC100129849	XM_001724022.1	XM_001724022.1		100129849	169172421	XM_001724022.1	LOC100129849	XP_001724074.1	ILMN_3184682	0003120273	A	15	GGGCCGGGGGCACCTGAGAAGGGATGGTGACATTGCGAAGGATTTCTCCA				8p21.1e	PREDICTED: Homo sapiens hypothetical protein LOC100129849 (LOC100129849), mRNA.					
Homo sapiens	RefSeq	NM_032221.3	ILMN_174095	CHD6	NM_032221.3	NM_032221.3		84181	29244923	NM_032221.3	CHD6	NP_115597.3	ILMN_2209163	0004250082	S	10129	CAGTTTTGCCTCCAGTGGAAGCAGAAAGGGTTTTTTCAGCTGTTAAATCC	20	-	40031380-40031429	20q12c	Homo sapiens chromodomain helicase DNA binding protein 6 (CHD6), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12592387] [evidence NAS]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 12592387] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 12592387] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12592387] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 12592387] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CHD5; KIAA1335; RIGB	KIAA1335; CHD5; RIGB
Homo sapiens	RefSeq	XM_930181.1	ILMN_176148	LOC647156	XR_017477.1	XR_017477.1		647156	113426059	XR_017477.1	LOC647156		ILMN_1674186	0006400736	S	1034	CACCTAGTGCATGAGGCACAGGGCAGAGTCATTTCAGTAAAAACCATTTC	16	-	32297717-32297766	16p11.2b	PREDICTED: Homo sapiens similar to ARP3 actin-related protein 3 homolog B (LOC647156), mRNA.					
Homo sapiens	RefSeq	NM_001068.2	ILMN_7099	TOP2B	NM_001068.2	NM_001068.2		7155	19913407	NM_001068.2	TOP2B	NP_001059.2	ILMN_1777663	0003890255	S	4749	AGACTTCCCTACTGAGCCACCTTCTCTGCCACGAACCGGTCGGGCTAGGA	3	-	25650790-25650835:25651059-25651062	3p24.2a	Homo sapiens topoisomerase (DNA) II beta 180kDa (TOP2B), mRNA.	A compact and highly condensed form of chromatin [goid 792] [pmid 9049244] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9049244] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9049244] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9049244] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9049244] [evidence IDA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 9049244] [evidence IDA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IEA]; Interacting selectively with protein kinase C [goid 5080] [pmid 16611985] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10666337] [evidence IPI]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 11062478] [evidence IPI]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 11136718] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10473615] [evidence IPI]	top2beta; TOPIIB	top2beta; TOPIIB
Homo sapiens	RefSeq	NM_001031801.1	ILMN_6284	LIMK2	NM_001031801.1	NM_001031801.1		3985	73390139	NM_001031801.1	LIMK2	NP_001026971.1	ILMN_1660624	0004120561	I	2777	AGGCCAAGGACCGCAGTCCTTCAGTAACACCAGTGTAAAAGCTTGAGGAG	22	+	30003487-30003536	22q12.2c	Homo sapiens LIM domain kinase 2 (LIMK2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8954941] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8954941] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8537403] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8537403] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_014604.2	ILMN_30141	TAX1BP3	NM_014604.2	NM_014604.2		30851	62339397	NM_014604.2	TAX1BP3	NP_055419.1	ILMN_1803392	0001430647	S	1071	GGGTGCTGGCCTCCCCAGGGTTTGCCTTCTTACGGATTTAGACGAGGTTC	17	-	3566449-3566498	17p13.3a	Homo sapiens Tax1 (human T-cell leukemia virus type I) binding protein 3 (TAX1BP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10940294] [evidence NAS]	A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 10940294] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11163757] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10940294] [evidence IPI]	TIP-1	TIP-1
Homo sapiens	RefSeq	NM_052859.2	ILMN_28925	RFT1	NM_052859.2	NM_052859.2		91869	31377635	NM_052859.2	RFT1	NP_443091.1	ILMN_1736285	0004890228	S	2647	CAATACAACCAAATTCCAGCCCCAGGACAAGAGTGGCAGGCATGGGGGCC	3	-	53099935-53099984	3p21.1c	Homo sapiens RFT1 homolog (S. cerevisiae) (RFT1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]		
Homo sapiens	Unigene	Hs.146586	ILMN_78348	HS.146586	Hs.146586		Hs.146586		27826481	BX092799			ILMN_1912438	0002100739	S	735	TAAGTATCAAAAGGGGAAGGGGGAAAACACCCATCTGGAGTTTGGTTCTG	14	+	58489907-58489956		BX092799 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGp998K074219 ; IMAGE:1662462, mRNA sequence					
Homo sapiens	RefSeq	NM_197977.1	ILMN_166079	ZNF189	NM_197977.1	NM_197977.1		7743	37574607	NM_197977.1	ZNF189	NP_932094.1	ILMN_1797554	0001710441	I	311	GAGACTTGATAAATCGGCCTGAGAAAATAAGTAATGCTCCAGACTAGCTC	9	+	103201499-103201548	9q31.1b	Homo sapiens zinc finger protein 189 (ZNF189), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9653648] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9653648] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_017815.1	ILMN_26864	HAUS4	NM_017815.1	NM_017815.1		54930	8923395	NM_017815.1	HAUS4	NP_060285.1	ILMN_1771003	0004810112	S	1336	TAGCTGCTGCCTCCTAATCTTCCTGCTAGTGGGACCACCTTCACCTGGGG	14	-	23415650-23415699	14q11.2f	Homo sapiens HAUS augmin-like complex, subunit 4 (HAUS4), mRNA.				FLJ20424	FLJ20424
Homo sapiens	Unigene	Hs.544751	ILMN_108107	HS.544751	Hs.544751		Hs.544751		31012672	CD252206			ILMN_1911873	0001410601	S	144	CTTCCTCCTTATTGGCTCAGCAGTGAGATGGGCTGGCTTGAACCTCCAGG	6	+	3301914-3301963		AGENCOURT_14161944 NIH_MGC_181 Homo sapiens cDNA clone IMAGE:30374818 5, mRNA sequence					
Homo sapiens	RefSeq	NM_000223.2	ILMN_22735	KRT12	NM_000223.2	NM_000223.2		3859	47132618	NM_000223.2	KRT12	NP_000214.1	ILMN_1781884	0000870433	S	1424	CCCGAAAAATCAAGACAGTTGTGCAGGAGATGGTGAATGGTGAGGTGGTC	17	-	36271474-36271523	17q21.2a	Homo sapiens keratin 12 (Meesmann corneal dystrophy) (KRT12), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9171831] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9171831] [evidence NAS]	K12	K12
Homo sapiens	RefSeq	XM_945536.1	ILMN_35798	LOC652470	XM_945536.1	XM_945536.1		652470	88955163	XM_945536.1	LOC652470	XP_950629.1	ILMN_1658093	0003940259	S	144	GGTGAGACGTGGTCTTGTAACACAGTGGTTAAGAATGTGACTTTGGAGCC					PREDICTED: Homo sapiens hypothetical protein LOC652470 (LOC652470), mRNA.					
Homo sapiens	RefSeq	XM_937632.1	ILMN_39388	LOC648569	XM_937632.1	XM_937632.1		648569	89060998	XM_937632.1	LOC648569	XP_942725.1	ILMN_1672103	0000510390	S	74	ATGTGAAGCCAGTGGATCTCACCTTGTTGGACTCCATGGGGGTTGGGATC					PREDICTED: Homo sapiens hypothetical protein LOC648569 (LOC648569), mRNA.					
Homo sapiens	RefSeq	XM_926623.1	ILMN_31553	LOC285900	XM_926623.1	XM_926623.1		285900	89024942	XM_926623.1	LOC285900	XP_931716.1	ILMN_1657612	0002480403	A	415	AAACTGCAAGCCAGCATTACCCCTGGGACCATTCTGATCATCCTCACTGG	7	-	63239753-63239802	7q11.21c	PREDICTED: Homo sapiens similar to 60S ribosomal protein L6 (TAX-responsive enhancer element binding protein 107) (TAXREB107) (Neoplasm-related protein C140), transcript variant 3 (LOC285900), mRNA.					
Homo sapiens	RefSeq	XM_943559.1	ILMN_166587	BRUNOL4	XM_001128998.1	XM_001128998.1		56853	113427921	XM_001128998.1	BRUNOL4	XP_001128998.1	ILMN_1660400	0001990112	A	187	TTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGTACCAACGGGCTCGG				18q12.2b-q12.2c	PREDICTED: Homo sapiens bruno-like 4, RNA binding protein (Drosophila) (BRUNOL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [pmid 10893231] [evidence NAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 10893231] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding to nucleic acid [goid 900] [pmid 10893231] [evidence NAS]; Interacting selectively with the RNA element BRE (Bruno response element) [goid 42835] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	XM_941878.1	ILMN_31178	LOC652435	XM_941878.1	XM_941878.1		652435	89062784	XM_941878.1	LOC652435	XP_946971.1	ILMN_1713105	0005360523	S	38	GCAGCTGCAAAGTGGAAGAAGAGGCCTTTACTCATATACTTGGCGATGTG					PREDICTED: Homo sapiens similar to isoleucine-tRNA synthetase (LOC652435), mRNA.					
Homo sapiens	RefSeq	XM_087225.6	ILMN_45760	MSL3L2	XM_939716.2	XM_939716.2		151507	113414315	XM_939716.2	MSL3L2	XP_944809.1	ILMN_1678526	0003140594	S	244	GAAGAACCGGAGCTTCAAACAAAAAGGGAAATGGAAGAAAGAACAGTAAC				2q37.1e	PREDICTED: Homo sapiens male-specific lethal 3-like 2 (Drosophila) (MSL3L2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]			
Homo sapiens	RefSeq	NM_203457.1	ILMN_13153	PPIE	NM_203457.1	NM_203457.1		10450	45439317	NM_203457.1	PPIE	NP_982282.1	ILMN_2326737	0002810653	A	491	GGCTGGCCGCATCCAGATGCTCCTGCGTTCTGATGTCGTGCCCATGACAG	1	+	39983705-39983754	1p34.2d	Homo sapiens peptidylprolyl isomerase E (cyclophilin E) (PPIE), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11313484] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11313484] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11313484] [evidence TAS]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [pmid 11313484] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11313484] [evidence IPI]; Interacting selectively with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids [goid 16018] [pmid 9747881] [evidence TAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CYP-33; MGC3736; MGC111222	CYP-33; MGC3736; MGC111222
Homo sapiens	RefSeq	NM_004857.2	ILMN_5187	AKAP5	NM_004857.2	NM_004857.2		9495	21493042	NM_004857.2	AKAP5	NP_004848.2	ILMN_1690818	0003800189	S	2119	GGAAGAAGCCAGTAACAGTACCCTAGAAAGTGCACCAAATGGAAAAGACT	14	+	64005696-64005745	14q23.3a	Homo sapiens A kinase (PRKA) anchor protein 5 (AKAP5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1512224] [evidence NAS]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1512224] [evidence NAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 1512224] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 1512224] [evidence TAS]	AKAP75; H21; AKAP79	AKAP75; H21; AKAP79
Homo sapiens	RefSeq	NM_001005196.1	ILMN_169855	OR8B4	NM_001005196.1	NM_001005196.1		283162	52353285	NM_001005196.1	OR8B4	NP_001005196.1	ILMN_1757259	0001980072	S	617	CCATGCTATCCAGCATAAGCATCGTCATCTCTTACGCTTTGATACTCTCC	11	-	124294101-124294150	11q24.2a	Homo sapiens olfactory receptor, family 8, subfamily B, member 4 (OR8B4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR8B4P; OR11-315	OR8B4P; OR11-315
Homo sapiens	RefSeq	NM_001037126.1	ILMN_29454	EXOC4	NM_001037126.1	NM_001037126.1		60412	82546831	NM_001037126.1	EXOC4	NP_001032203.1	ILMN_2394750	0003180278	A	1372	CGTCCTCCCATGCCATCAGTATGAGCGCCTATCTGCGAGAACAGAGAAGG	7	+	132815352-132815401	7q33a	Homo sapiens exocyst complex component 4 (EXOC4), transcript variant 2, mRNA.	A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [evidence IEA]	The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18329369] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence IEA]	SEC8L1; REC8; Sec8p; SEC8; MGC27170	SEC8L1; REC8; Sec8p; SEC8; MGC27170
Homo sapiens	RefSeq	NM_018991.2	ILMN_28376	STAG3L1	NM_018991.2	NM_018991.2		54441	50726993	NM_018991.2	STAG3L1	NP_061864.2	ILMN_1760682	0006550671	A	3	TTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCG	7	+	74826385-74826434	7q11.23d	Homo sapiens stromal antigen 3-like 1 (STAG3L1), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZP434A0131; MGC40269; MGC131759	DKFZP434A0131; MGC40269; MGC131759
Homo sapiens	RefSeq	NM_018991.2	ILMN_28376	STAG3L1	NM_018991.2	NM_018991.2		54441	50726993	NM_018991.2	STAG3L1	NP_061864.2	ILMN_1667315	0002070735	I	436	GGATGTCCTTCCTGAGATCCGTGCTATCTGCATTGAGGAAATTGGGTGTT	7	+	74831838-74831887	7q11.23d	Homo sapiens stromal antigen 3-like 1 (STAG3L1), transcript variant 1, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZP434A0131; MGC40269; MGC131759	DKFZP434A0131; MGC40269; MGC131759
Homo sapiens	RefSeq	NM_001042384.1	ILMN_175397	CEP63	NM_001042384.1	NM_001042384.1		80254	109255235	NM_001042384.1	CEP63	NP_001035843.1	ILMN_2288297	0006860554	I	1700	GTCTGGTTTTGAACTTCGGGATTCAAGCAATCCGCCAGCCTCAGCGTCCC	3	+	134293660-134293709	3q22.1e-q22.2a	Homo sapiens centrosomal protein 63kDa (CEP63), transcript variant 4, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]	MGC78416; FLJ13386	MGC78416; FLJ13386
Homo sapiens	RefSeq	NM_001042384.1	ILMN_175397	CEP63	NM_001042384.1	NM_001042384.1		80254	109255235	NM_001042384.1	CEP63	NP_001035843.1	ILMN_2396011	0006840349	A	1559	AGGCAGAAGACAAAGCAGTAGAGCATAAGGAGATTTTGGATCAGCTGGAG	3	+	134269074-134269102:134270768-134270788	3q22.1e-q22.2a	Homo sapiens centrosomal protein 63kDa (CEP63), transcript variant 4, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]	MGC78416; FLJ13386	MGC78416; FLJ13386
Homo sapiens	Unigene	Hs.168950	ILMN_80128	HS.168950	Hs.168950		Hs.168950		71051952	BC036496			ILMN_1905850	0005390156	S	2063	GAGGCAAATGTGAGTGATTTCCAGTGCTTTGAAAGGGATTACAGTATCAC	8	+	75441224-75441273		Homo sapiens cDNA clone IMAGE:5263960					
Homo sapiens	RefSeq	XM_931347.1	ILMN_39152	LOC653217	XM_931347.1	XM_931347.1		653217	88942949	XM_931347.1	LOC653217	XP_936440.1	ILMN_1654427	0004590286	S	245	AGGTTTCAGCTTTTGGGATATTATTGTTACCTTGAAAAATGTCACGTTTA	1	+	110681784-110681833		PREDICTED: Homo sapiens similar to RNA binding motif protein 15 (LOC653217), mRNA.					
Homo sapiens	RefSeq	NM_007032.3	ILMN_34620	TRIOBP	NM_001039141.1	NM_001039141.1		11078	88501737	NM_001039141.1	TRIOBP	NP_001034230.1	ILMN_1735788	0005570110	I	7762	TTCCTGCCCTACCTCCTACTAACACTTCCTGCCCCATTTGGACCCGTACC	22	+	36500261-36500310	22q13.1a	Homo sapiens TRIO and F-actin binding protein (TRIOBP), transcript variant 6, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 11148140] [evidence NAS]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Covalent modification of an actin molecule [goid 30047] [pmid 11148140] [evidence NAS]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [pmid 11148140] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17629495] [evidence IPI]; Interacting selectively with the GTP-bound form of the Rho protein [goid 17049] [pmid 11148140] [evidence NAS]; Interacting selectively with a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin [goid 45159] [pmid 11148140] [evidence NAS]	TARA; FLJ39315; KIAA1662; dJ37E16.4; HRIHFB2122; DFNB28	KIAA1662; dJ37E16.4
Homo sapiens	RefSeq	NM_198275.1	ILMN_23862	MPZL3	NM_198275.1	NM_198275.1		196264	38093644	NM_198275.1	MPZL3	NP_938016.1	ILMN_1795739	0006270082	S	547	GGAGGAAGGCTGCTGGGCTGAAGAAGAGGAGCAGGTCTGGCTATAAGAAG	11	-	118106161-118106210	11q23.3d	Homo sapiens myelin protein zero-like 3 (MPZL3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_018167.3	ILMN_1111	BTBD7	NM_018167.3	NM_018167.3		55727	50843880	NM_018167.3	BTBD7	NP_060637.1	ILMN_2356745	0003180017	A	553	CTAATAGGTCTGCCGATCATGCCAAGCAGATGCGAGAACTCCTCTCTGGG	14	-	93761089-93761138	14q32.12b-q32.13a	Homo sapiens BTB (POZ) domain containing 7 (BTBD7), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp686N0544; FUP1; MGC48310	DKFZp686N0544; FUP1; MGC48310
Homo sapiens	RefSeq	NM_018167.3	ILMN_1111	BTBD7	NM_018167.3	NM_018167.3		55727	50843880	NM_018167.3	BTBD7	NP_060637.1	ILMN_1757298	0003440259	I	2466	TCTAGCCCAGACCGGGAGGGTGAAAGTCTCCAAGGAAAGAGGTGTCTCGG	14	-	93754026-93754075	14q32.12b-q32.13a	Homo sapiens BTB (POZ) domain containing 7 (BTBD7), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp686N0544; FUP1; MGC48310	DKFZp686N0544; FUP1; MGC48310
Homo sapiens	RefSeq	NM_138786.1	ILMN_5533	TM4SF18	NM_138786.2	NM_138786.2		116441	142345050	NM_138786.2	TM4SF18	NP_620141.1	ILMN_1739170	0007400291	S	638	CCTCAGTGGGCTTCAAGTGATCATCTGCCTCATCAGAGTAGTCATGCAAC	3	-	150522773-150522822	3q25.1a	Homo sapiens transmembrane 4 L six family member 18 (TM4SF18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			L6D	L6D
Homo sapiens	RefSeq	XM_944279.1	ILMN_42401	LOC646932	XM_934060.1	XM_934060.1		646932	89029236	XM_934060.1	LOC646932	XP_939153.1	ILMN_1655615	0000940341	S	1	ATGGGTTCTACGTTTCATCAGGGGTTCCGAACCCTGGCTATGCACTGGAG	9	+	35479536-35479585	9p13.3b	PREDICTED: Homo sapiens hypothetical LOC646932 (LOC646932), mRNA.					
Homo sapiens	Unigene	Hs.448702	ILMN_93484	HS.448702	Hs.448702		Hs.448702		20987529	BC030212			ILMN_1895763	0007560240	S	1979	GGGGGCTCTCCCAGTTCATCACCTTCCGAGAATGAGGGCTTCGAGTCTGA	12	-	52825194-52825243		Homo sapiens, clone IMAGE:5199844, mRNA					
Homo sapiens	RefSeq	NM_001029839.1	ILMN_10936	C3ORF23	NM_001029839.1	NM_001029839.1		285343	71067097	NM_001029839.1	C3orf23	NP_001025010.1	ILMN_2246105	0006200181	I	49	GCCCAGCTGAGAATTCAGGGTTGGGGGCTCAGAGGGCACTGCGGCTAGGA	3	+	44355076-44355125	3p21.33a-p21.32c	Homo sapiens chromosome 3 open reading frame 23 (C3orf23), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]			MGC119533; MGC119530; DKFZp313N0621; FLJ41686; MGC119531; MGC119532	MGC119533; MGC119530; DKFZp313N0621; FLJ41686; MGC119531; MGC119532
Homo sapiens	RefSeq	NM_174887.2	ILMN_23759	IFT20	NM_174887.2	NM_174887.2		90410	34222241	NM_174887.2	IFT20	NP_777547.1	ILMN_3235216	0005900494	S	445	CGAGTAGGTGGGACTACAGGCCATCGGTGCTCGGAACTTGCTCAAATCTA	17	-	26656271-26656302:26657137-26657154	17q11.2a	Homo sapiens intraflagellar transport 20 homolog (Chlamydomonas) (IFT20), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]		
Homo sapiens	RefSeq	NM_205543.1	ILMN_166548	ALS2CR16	XM_001134431.1	XM_001134431.1		130029	113413282	XM_001134431.1	ALS2CR16	XP_001134431.1	ILMN_1663897	0000050132	S	622	CCCACCATCACCAGACCACTGATCTGCTTTCTTTATGATCAGTTTGCTAC	2	+	203560961-203561010	2q33.2a	PREDICTED: Homo sapiens amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 16 (ALS2CR16), mRNA.					
Homo sapiens	RefSeq	NM_014691.2	ILMN_166517	AQR	NM_014691.2	NM_014691.2		9716	58374127	NM_014691.2	AQR	NP_055506.1	ILMN_2177460	0001070546	S	4981	CTGGACTTAACCACGAATACCCTTGAGTGTCCAAATTGGGAAGGAACTTG	15	-	35148601-35148650	15q14a-q14b	Homo sapiens aquarius homolog (mouse) (AQR), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	DKFZp686B23123; KIAA0560	DKFZp686B23123; KIAA0560
Homo sapiens	RefSeq	NM_016400.2	ILMN_27741	C15ORF63	NM_016400.2	NM_016400.2		25764	21361540	NM_016400.2	C15orf63	NP_057484.3	ILMN_1663484	0000830086	S	754	CAGTGTAGAAGAATACCTCATGTGCAGATGCTAGGTGGCAGGCCAGTCTC	15	+	41881484-41881533	15q15.3b	Homo sapiens chromosome 15 open reading frame 63 (C15orf63), mRNA.				HSPC136	HSPC136
Homo sapiens	RefSeq	NM_016400.2	ILMN_27741	C15ORF63	NM_016400.2	NM_016400.2		25764	21361540	NM_016400.2	C15orf63	NP_057484.3	ILMN_2073543	0006660332	S	1152	CGTCTCCACTGAAAATAGAAAAATTAGCTGGGCATGGTGGTGGGCGCCTA	15	+	41881882-41881931	15q15.3b	Homo sapiens chromosome 15 open reading frame 63 (C15orf63), mRNA.				HSPC136	HSPC136
Homo sapiens	RefSeq	NM_213618.1	ILMN_27245	ST5	NM_213618.1	NM_213618.1		6764	47132531	NM_213618.1	ST5	NP_998783.1	ILMN_1686988	0006510307	I	25	ACGAAAGGTCAGAGGAAGGAGCTGTGGGAAGCTCGCAGCAGGTATCGGAG	11	-	8832150-8832199	11p15.4b-p15.4a	Homo sapiens suppression of tumorigenicity 5 (ST5), transcript variant 3, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9632734] [evidence IPI]	HTS1; MGC33090; DENND2B; p126	HTS1; MGC33090; DENND2B; p126
Homo sapiens	RefSeq	NM_005418.3	ILMN_27245	ST5	NM_213618.1	NM_213618.1		6764	47132531	NM_213618.1	ST5	NP_998783.1	ILMN_1773470	0004060594	A	4111	GGCAAAGGCCAATCAGTCCCCATTTGTAGCATGGCACCAGGGTCTTAGGC	11	-	8715348-8715397	11p15.4b-p15.4a	Homo sapiens suppression of tumorigenicity 5 (ST5), transcript variant 3, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9632734] [evidence IPI]	HTS1; MGC33090; DENND2B; p126	HTS1; MGC33090; DENND2B; p126
Homo sapiens	RefSeq	NM_001004484.1	ILMN_184046	OR13D1	NM_001004484.1	NM_001004484.1		286365	52317185	NM_001004484.1	OR13D1	NP_001004484.1	ILMN_1807924	0003830154	S	967	AGCCTCAGGAATAAAGAGGTCAAAGAGGCTGTAAAGAAAGTCCTGAGCAG	9	+	106497490-106497539	9q31.1d	Homo sapiens olfactory receptor, family 13, subfamily D, member 1 (OR13D1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR9-15	OR9-15
Homo sapiens	RefSeq	NM_001010854.1	ILMN_25827	TTC7B	NM_001010854.1	NM_001010854.1		145567	60685230	NM_001010854.1	TTC7B	NP_001010854.1	ILMN_1718971	0004290161	S	3042	CTTTTCTCCCCACCACCCCTCCTGCCCCACTTTGGCCCAGAAACCAAATG	14	-	91007274-91007323	14q32.11a	Homo sapiens tetratricopeptide repeat domain 7B (TTC7B), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	c14_5685; TTC7L1	c14_5685; TTC7L1
Homo sapiens	RefSeq	XM_001133811.1	ILMN_167621	LOC729626	XM_001133811.1	XM_001133811.1		729626	113428297	XM_001133811.1	LOC729626	XP_001133811.1	ILMN_3226737	0001170367	A	239	GACTCACAGGACTGGAAGCCCAGAACCTCTATGTGGAATCCTAGACCACC	19	-	52961819-52961868	19q13.32c	PREDICTED: Homo sapiens hypothetical LOC729626 (LOC729626), mRNA.					
Homo sapiens	RefSeq	NM_001007538.1	ILMN_28602	SHISA2	NM_001007538.1	NM_001007538.1		387914	56090522	NM_001007538.1	SHISA2	NP_001007539.1	ILMN_1760412	0007650523	S	2511	CCCACACTGTTCTTGATTTCCTCTCTCTTTCAGGCCTCAACAGGCACTGT	13	-	26619063-26619112	13q12.13b	Homo sapiens shisa homolog 2 (Xenopus laevis) (SHISA2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		bA398O19.2; WGAR9166; C13orf13; PRO28631	bA398O19.2; WGAR9166; C13orf13; PRO28631
Homo sapiens	RefSeq	XM_926336.1	ILMN_31635	LOC642451	XM_926336.2	XM_926336.2		642451	113425902	XM_926336.2	LOC642451	XP_931429.1	ILMN_1653865	0000360576	S	309	AAATCTCCTGAAAAAGAGGAAGGCTTATCAGGCACTCAAAGCCACCCAGG	16	+	11028423-11028472	16p13.13c	PREDICTED: Homo sapiens similar to ribosomal protein L7-like 1 (LOC642451), mRNA.					
Homo sapiens	RefSeq	NM_014908.3	ILMN_178123	DOLK	NM_014908.3	NM_014908.3		22845	46094052	NM_014908.3	DOLK	NP_055723.1	ILMN_1753627	0003390730	S	1933	CAGTTATGCTTGGATTTTGGGGTCCATCAGCACTGTGTCCCTCCTGGAAG	9	-	131708030-131708079	9q34.11c	Homo sapiens dolichol kinase (DOLK), mRNA.				SEC59; DK; KIAA1094; DK1; TMEM15	SEC59; DK; KIAA1094; DK1; TMEM15
Homo sapiens	RefSeq	XM_936503.1	ILMN_33084	LOC648164	XM_936503.1	XM_936503.1		648164	89066438	XM_936503.1	LOC648164	XP_941596.1	ILMN_1704284	0001510255	I	1227	GGGCCTGTTGTAGCTTAGAATGAGAGACCTGCAGAAACATGCCCACCATC					PREDICTED: Homo sapiens similar to germinal histone H4 gene, transcript variant 1 (LOC648164), mRNA.					
Homo sapiens	RefSeq	NM_001100910.1	ILMN_344980	FAM72B	NM_001100910.1	NM_001100910.1		653820	155029536	NM_001100910.1	FAM72B	NP_001094380.1	ILMN_3243986	0001690437	S	709	TAGGACTTAGAAAAGCTCTAGGTCCCGCAACTTGAATTTTAGCCTAGGGG	1	+	120641236-120641285	1p12a	Homo sapiens family with sequence similarity 72, member B (FAM72B), mRNA.				RP11-439A17.6	RP11-439A17.6
Homo sapiens	RefSeq	NM_024613.2	ILMN_179796	PLEKHF2	NM_024613.2	NM_024613.2		79666	31543413	NM_024613.2	PLEKHF2	NP_078889.1	ILMN_2106449	0002190634	S	848	GTGCGGATTTGTGACTTCTGCTATGACCTGCTTTCTGCTGGGGACATGGC	8	+	96166879-96166928	8q22.1c	Homo sapiens pleckstrin homology domain containing, family F (with FYVE domain) member 2 (PLEKHF2), mRNA.	Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ13187; ZFYVE18; PHAFIN2	FLJ13187; ZFYVE18; PHAFIN2
Homo sapiens	RefSeq	NM_198465.1	ILMN_5152	NRK	NM_198465.2	NM_198465.2		203447	118600962	NM_198465.2	NRK	NP_940867.2	ILMN_1687392	0003130471	S	7435	CAGAAGTGTGGAGGGGGGCTCCTGACTAGACAATTTCCCTAGCCCTTGTG	X	+	105088206-105088255	Xq22.3a	Homo sapiens Nik related kinase (NRK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity in response to phosphorylation by a member of the JUN kinase kinase kinase (JNKKK) family, or another upstream kinase. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress [goid 7256] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp686A17109; FLJ16788; NESK; MGC131849	DKFZp686A17109; FLJ16788; NESK
Homo sapiens	RefSeq	NM_006622.1	ILMN_5648	PLK2	NM_006622.2	NM_006622.2		10769	93004080	NM_006622.2	PLK2	NP_006613.2	ILMN_1717706	0001740746	S	2502	GGAACTGTGAATATACTTCCTGAAGGGGAGGGAGAAGGGAGGAAGCTCCC	5	-	57785800-57785849	5q11.2g	Homo sapiens polo-like kinase 2 (Drosophila) (PLK2), mRNA.		Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SNK	SNK
Homo sapiens	RefSeq	XM_941478.1	ILMN_45217	LOC652141	XM_941478.1	XM_941478.1		652141	89037919	XM_941478.1	LOC652141	XP_946571.1	ILMN_1811945	0000010091	S	431	TTCCAGACCTCAAGCCCTTTTCTTGGCGCTCAGGTGGGTCTCAGGCTGTG					PREDICTED: Homo sapiens similar to Ig heavy chain V-III region VH26 precursor (LOC652141), mRNA.					
Homo sapiens	RefSeq	NM_002451.3	ILMN_163674	MTAP	NM_002451.3	NM_002451.3		4507	47132621	NM_002451.3	MTAP	NP_002442.2	ILMN_1753639	0002600291	S	4645	AGCTGTTTCAGGGCCTGTTGCCAGCTATGCCTTTGAGAACCTCGGGATCC	9	+	21855130-21855179	9p21.3c	Homo sapiens methylthioadenosine phosphorylase (MTAP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 8687427] [evidence TAS]	Catalysis of the transfer of a pentosyl group from one compound (donor) to another (acceptor) [goid 16763] [evidence IEA]; Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate. The name should be qualified in each instance by adding the name of the natural substrate, e.g. maltodextrin phosphorylase, starch phosphorylase, glycogen phosphorylase [goid 4645] [pmid 8687427] [evidence TAS]; Catalysis of the reaction: 5'-methylthioadenosine + phosphate = adenine + 5-methylthio-D-ribose 1-phosphate [goid 17061] [evidence IEA]	c86fus; MSAP	c86fus; MSAP
Homo sapiens	RefSeq	NM_000219.2	ILMN_164689	KCNE1	NM_000219.2	NM_000219.2		3753	60218914	NM_000219.2	KCNE1	NP_000210.2	ILMN_2047618	0002470554	S	3220	AGGCAGAGGGAGATCCCTATGGCGTTAGTCTTCCCAGGCCTTAAAGGGCC	21	-	34741158-34741207	21q22.12a	Homo sapiens potassium voltage-gated channel, Isk-related family, member 1 (KCNE1), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 16780588] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16780588] [evidence IDA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8900283] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8900283] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9020846] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9020846] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 9020846] [evidence NAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9445165] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 9354802] [evidence TAS];  [goid 15459] [pmid 9230439] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MinK; LQT5; JLNS2; MGC33114; JLNS; ISK	JLNS2; MGC33114; ISK; MinK; LQT5; JLNS
Homo sapiens	RefSeq	NM_016335.2	ILMN_17486	PRODH	NM_016335.2	NM_016335.2		5625	19924110	NM_016335.2	PRODH	NP_057419.2	ILMN_1671365	0005860689	S	2181	GTGTGGGCCGAACCTGATACCTGCCTGGGACAGCCACTGGAAACTTTTGG	22	-	17280464-17280513	22q11.21b	Homo sapiens proline dehydrogenase (oxidase) 1 (PRODH), nuclear gene encoding mitochondrial protein, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid [goid 6537] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [evidence IEA]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [pmid 9305847] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glutamate, the anion of 2-aminopentanedioic acid [goid 6537] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: L-proline + acceptor = (S)-1-pyrroline-5-carboxylate + reduced acceptor [goid 4657] [pmid 10192398] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-proline + acceptor = (S)-1-pyrroline-5-carboxylate + reduced acceptor [goid 4657] [evidence IEA]	HSPOX2; MGC148078; PIG6; SCZD4; FLJ33744; PRODH1; TP53I6; MGC148079; PRODH2	HSPOX2; MGC148078; PIG6; SCZD4; FLJ33744; PRODH1; TP53I6; MGC148079; PRODH2
Homo sapiens	RefSeq	NM_022821.2	ILMN_26179	ELOVL1	NM_022821.2	NM_022821.2		64834	42490763	NM_022821.2	ELOVL1	NP_073732.1	ILMN_1798123	0003370722	S	1176	TGGCCTCATTGCTGTCTGCCACTCCAGAGCTGGGGGCTAAAAGGGCTGTA	1	-	43829329-43829378	1p34.2a	Homo sapiens elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 (ELOVL1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CGI-88; Ssc1	CGI-88; Ssc1
Homo sapiens	RefSeq	NM_002016.1	ILMN_173861	LOC730833	XR_015587.1	XR_015587.1		730833	113412356	XR_015587.1	LOC730833		ILMN_1720695	0000580441	S	10990	GGAGACATGGCAGCTATGGTAGTGCAGATTATGATTATGGTGAATCCGGG					PREDICTED: Homo sapiens similar to filaggrin (LOC730833), mRNA.					
Homo sapiens	RefSeq	XR_038223.1	ILMN_345392	LOC728820	XR_038223.1	XR_038223.1		728820	169168183	XR_038223.1	LOC728820		ILMN_3226291	0002320672	A	291	AGATCCCAAAGGGTGTCAGCCGCAAGCTCAACTTGCCTACACTGTCCACC				5q14.1c	PREDICTED: Homo sapiens misc_RNA (LOC728820), miscRNA.					
Homo sapiens	RefSeq	XR_038223.1	ILMN_345392	LOC728820	XR_038223.1	XR_038223.1		728820	169168183	XR_038223.1	LOC728820		ILMN_3302896	0004560669	M	1	GATTCTAGGCGCTTCAGGAGCCGCGCCTTAAGGTGCAGACATGGCCAAGT				5q14.1c	PREDICTED: Homo sapiens misc_RNA (LOC728820), miscRNA.					
Homo sapiens	RefSeq	NM_004422.2	ILMN_29320	DVL2	NM_004422.2	NM_004422.2		1856	48762939	NM_004422.2	DVL2	NP_004413.1	ILMN_1652163	0007570059	S	2784	TGAAGAATTCCCATCCATTGGGCCCCTTCTAACCCCAGAATGTGACCTCC	17	-	7128843-7128892	17p13.1d	Homo sapiens dishevelled, dsh homolog 2 (Drosophila) (DVL2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9192851] [evidence TAS]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IEA]; The regionalization process that results in defined areas of the imaginal disc that will undergo specific cell differentaiton. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form [goid 7447] [pmid 8887313] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8887313] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16189514] [evidence IPI]		
Homo sapiens	Unigene	Hs.571249	ILMN_123430	HS.571249	Hs.571249		Hs.571249		83074961	DA953700			ILMN_1901341	0002750239	S	48	CCTGAAGCAGGGCTGCCACACGCCACCATTCGACAACTCAAGGGCACCAT	7	-	106507192-106507241		DA953700 SPLEN2 Homo sapiens cDNA clone SPLEN2031745 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001714530.1	ILMN_342974	LOC100133472	XM_001714530.1	XM_001714530.1		100133472	169194798	XM_001714530.1	LOC100133472	XP_001714582.1	ILMN_3242053	0002970427	S	1676	GCAACTGTACAAACCATGTAAGCACTGAGAAGCCTTTTAGGAAAATCGGG					PREDICTED: Homo sapiens similar to hCG1812818 (LOC100133472), mRNA.					
Homo sapiens	RefSeq	NM_001004688.1	ILMN_23374	OR2M2	NM_001004688.1	NM_001004688.1		391194	52317203	NM_001004688.1	OR2M2	NP_001004688.1	ILMN_1769374	0003870239	S	777	CATACGGCCCACATCTGATCACTCCCCAACGCAGGACAAGATGGTGTCTG	1	+	246410687-246410736	1q44f	Homo sapiens olfactory receptor, family 2, subfamily M, member 2 (OR2M2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OST423; OR2M2Q	OST423; OR2M2Q
Homo sapiens	RefSeq	XM_939313.1	ILMN_166815	SPATA3	XR_017695.1	XR_017695.1		130560	113413287	XR_017695.1	SPATA3		ILMN_1668708	0005270035	A	595	AAACCCTCCAGTCATCGTAACGCGTGTCCTCCAAGCCCTCGGAACTGTGG	2	+	231575656-231575705	2q37.1a	PREDICTED: Homo sapiens spermatogenesis associated 3 (SPATA3), misc RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 12812072] [evidence IEP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12812072] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_139073.2	ILMN_166815	SPATA3	XR_017695.1	XR_017695.1		130560	113413287	XR_017695.1	SPATA3		ILMN_1740915	0006660521	I	1266	CCTCCTCAGATTTGCCCTGCACTTCTTGTTCCATGCTTGGGGTCCTAAGA	2	+	231592692-231592741	2q37.1a	PREDICTED: Homo sapiens spermatogenesis associated 3 (SPATA3), misc RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 12812072] [evidence IEP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12812072] [evidence IEP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		TSARG1
Homo sapiens	RefSeq	NR_029491.1	ILMN_387961	MIR19B2	NR_029491.1	NR_029491.1		406981	262205649	NR_029491.1	MIR19B2		ILMN_3309894	0003460619	S	23	TGCAGGTTTGCATTTCAGCGTATATATGTATATGTGGCTGTGCAAATCCA				Xq26.2b	Homo sapiens microRNA 19b-2 (MIR19B2), microRNA.					
Homo sapiens	RefSeq	NM_000791.3	ILMN_182154	DHFR	NM_000791.3	NM_000791.3		1719	68303806	NM_000791.3	DHFR	NP_000782.1	ILMN_1782813	0006860440	S	1386	ACCCTTCAACTGAGCAGTTTCACTAGTGGAAATACCAAAAGCTTCCTACG	5	-	79960282-79960331	5q14.1e	Homo sapiens dihydrofolate reductase (DHFR), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of glycine, aminoethanoic acid [goid 6545] [evidence NAS]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 5,6,7,8-tetrahydrofolate + NADP+ = 7,8-dihydrofolate + NADPH + H+ [goid 4146] [pmid 6687716] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	RefSeq	XM_372926.5	ILMN_34885	LOC391370	XM_372926.5	XM_372926.5		391370	169163140	XM_372926.5	LOC391370	XP_372926.3	ILMN_3293367	0003390674	M	87	TGGCCTAGCATGTGGAATTTGCAAAGCTGCCAAAGCCTTAGACAAGCGCC	2	-	41931109-41931158	2p21f	PREDICTED: Homo sapiens similar to hCG1818387 (LOC391370), mRNA.					
Homo sapiens	RefSeq	XM_001721629.1	ILMN_343043	LOC154860	XM_001721629.1	XM_001721629.1		154860	169171443	XM_001721629.1	LOC154860	XP_001721681.1	ILMN_3285206	0002640639	M	729	AAGAGGGGTGGAAAGGAAGAGAGCTTGGGCTGGGAACGCGCCTGATGTCT				7q31.32a	PREDICTED: Homo sapiens hypothetical protein LOC154860 (LOC154860), mRNA.					
Homo sapiens	RefSeq	XR_037554.1	ILMN_340281	LOC100131984	XR_037554.1	XR_037554.1		100131984	169217342	XR_037554.1	LOC100131984		ILMN_3239846	0007560066	S	792	CCAGGGCGCACAACCTCGGGCAGGACTAATGGACTTAAAAAACAGGCTCA	Y	-	11783846-11783895	Yq11.1b	PREDICTED: Homo sapiens misc_RNA (LOC100131984), miscRNA.					
Homo sapiens	RefSeq	NM_001085490.1	ILMN_309059	LOC285501	NM_001085490.1	NM_001085490.1		285501	148236060	NM_001085490.1	LOC285501	NP_001078959.1	ILMN_3245954	0004390437	S	644	TGAGGTCAGCTAGAATGATGGATTGTCATCACTGGGGCACGGGAAAGGGG	4	+	179133964-179134013	4q34.3a-q34.3b	Homo sapiens hypothetical protein LOC285501 (LOC285501), mRNA.					
Homo sapiens	RefSeq	NM_014812.1	ILMN_892	CEP170	NM_014812.2	NM_014812.2		9859	109255227	NM_014812.2	CEP170	NP_055627.2	ILMN_1755290	0003940372	A	905	ATATTTCTGCTATGCCCCGTGGTACTCCATTATATGGGCAGCCGTCATGG	1	-	243362446-243362495	1q43f	Homo sapiens centrosomal protein 170kDa (CEP170), transcript variant alpha, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			FAM68A; KAB; KIAA0470	FAM68A; KAB; KIAA0470
Homo sapiens	RefSeq	NM_014812.2	ILMN_892	CEP170	NM_014812.2	NM_014812.2		9859	109255227	NM_014812.2	CEP170	NP_055627.2	ILMN_2294684	0000380767	I	1681	ACTAGCTCTGCGCATCACAGAGGGGGGCATGGTGTTCCACATGGGAAATT	1	-	243349324-243349373	1q43f	Homo sapiens centrosomal protein 170kDa (CEP170), transcript variant alpha, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			FAM68A; KAB; KIAA0470	FAM68A; KAB; KIAA0470
Homo sapiens	RefSeq	NM_152583.1	ILMN_139261	ARMCX4	NM_152583.1	NM_152583.1		158947	22749204	NM_152583.1	ARMCX4	NP_689796.1	ILMN_1743345	0001470474	S	3588	TTCTTCCAGAAGTCCCCTCCTCCATGACTCTAGCTCTCACTAGGCTCCAG	X	+	100674902-100674951	Xq22.1c	Homo sapiens armadillo repeat containing, X-linked 4 (ARMCX4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC40053; DKFZp781M0415	MGC40053; DKFZp781M0415
Homo sapiens	RefSeq	XM_945146.1	ILMN_44084	LOC652034	XM_945146.1	XM_945146.1		652034	89037885	XM_945146.1	LOC652034	XP_950239.1	ILMN_1730887	0005080253	S	913	AAAGTGGGTCCTGCCATGGCGGCCGGGTGGGCTGAGTTTTCGGCATCTCT					PREDICTED: Homo sapiens hypothetical protein LOC652034 (LOC652034), mRNA.					
Homo sapiens	RefSeq	NM_006858.2	ILMN_170663	TMED1	NM_006858.2	NM_006858.2		11018	27894322	NM_006858.2	TMED1	NP_006849.1	ILMN_1693045	0001580356	S	1270	GCCCGGCCAAAGTCTAGGCAGAAGCCTCCTATAACAAAGGGTGGTGTGGC	19	-	10943151-10943200	19p13.2b	Homo sapiens transmembrane emp24 protein transport domain containing 1 (TMED1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8621446] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8621446] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 8621446] [evidence TAS]	Il1rl1l; MGC1270; IL1RL1LG; ST2L	Il1rl1l; MGC1270; IL1RL1LG; ST2L
Homo sapiens	RefSeq	NM_019082.2	ILMN_23028	DDX56	NM_019082.2	NM_019082.2		54606	51094102	NM_019082.2	DDX56	NP_061955.1	ILMN_1679405	0007380653	S	2257	GAAATTCAGACCCACAGCCAAGCCCTCCTGAGGTTGTTGGGCCTCTCTGG	7	-	44605581-44605600:44605601-44605630	7p13d	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 (DDX56), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10749921] [evidence TAS]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 10749921] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DDX21; NOH61	DDX21; NOH61
Homo sapiens	RefSeq	XR_039699.1	ILMN_346046	LOC646709	XR_039699.1	XR_039699.1		646709	169214070	XR_039699.1	LOC646709		ILMN_3288466	0006100348	M	1240	CCCTAATCAAGGAAGAGTGCAGGATGTTCAGAGTCAGCTTCTGCTTGACA				19q13.43a	PREDICTED: Homo sapiens misc_RNA (LOC646709), miscRNA.					
Homo sapiens	RefSeq	XM_001723812.1	ILMN_348378	LOC100129733	XM_001723812.1	XM_001723812.1		100129733	169169281	XM_001723812.1	LOC100129733	XP_001723864.1	ILMN_3268507	0002100523	M	148	AATTTAAAAAGCTCCAACTTCTGTCCCCCAGGGTCGGTAAGGTTTATTGT	6	-	126122594-126122643	6q22.31e	PREDICTED: Homo sapiens hypothetical protein LOC100129733 (LOC100129733), mRNA.					
Homo sapiens	RefSeq	XM_001723812.1	ILMN_348378	LOC100129733	XM_001723812.1	XM_001723812.1		100129733	169169281	XM_001723812.1	LOC100129733	XP_001723864.1	ILMN_3192034	0002850296	A	13	TGTTTGTGTCTCAAATAGCTTTATTGTTCCTTTGTGGATCTGTCGGCATC	6	-	126122729-126122778	6q22.31e	PREDICTED: Homo sapiens hypothetical protein LOC100129733 (LOC100129733), mRNA.					
Homo sapiens	RefSeq	NM_024886.1	ILMN_18569	C10ORF95	NM_024886.1	NM_024886.1		79946	13376334	NM_024886.1	C10orf95	NP_079162.1	ILMN_1797104	0001300735	S	1112	TCTTGCACCTTGGGAAGTGGAGGACGTGGGATGGAAGAAGGGCCTGGACC	10	-	104209901-104209950	10q24.32b	Homo sapiens chromosome 10 open reading frame 95 (C10orf95), mRNA.				FLJ14280	FLJ14280
Homo sapiens	RefSeq	XM_001130109.1	ILMN_180122	LOC728591	XM_001130109.1	XM_001130109.1		728591	113424049	XM_001130109.1	LOC728591	XP_001130109.1	ILMN_3301359	0001780326	M	840	GCACCACCCCCAGGATTGTGATCTCACATGTATTTCTTTAAGCCTCCCCC	13	-	35699266-35699315	13q13.3b	PREDICTED: Homo sapiens hypothetical protein LOC728591 (LOC728591), mRNA.					
Homo sapiens	RefSeq	NM_001004351.2	ILMN_16314	MGC57359	NM_001004351.2	NM_001004351.2		441272	118601063	NM_001004351.2	MGC57359	NP_001004351.2	ILMN_2411384	0003840037	A	1836	GGGGTACTTCTAGGAGTCCTTGGAGAAAAGTAAGAAACCAGGAGTGTTTC	7	+	99756626-99756675	7q22.1c	Homo sapiens similar to Williams Beuren syndrome chromosome region 19 (MGC57359), mRNA.				MGC119294	MGC119294
Homo sapiens	RefSeq	XM_001718847.1	ILMN_347503	LOC643733	XM_001718847.1	XM_001718847.1		643733	169203661	XM_001718847.1	LOC643733	XP_001718899.1	ILMN_3290136	0000650072	M	273	GCCTCCAAGAAATGGGGCTGACTTTGCCATCATGGAGATGAAGAAGCTGC				11q22.3a	PREDICTED: Homo sapiens hypothetical LOC643733 (LOC643733), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]		
Homo sapiens	Unigene	Hs.552320	ILMN_110943	HS.552320	Hs.552320		Hs.552320		31443686	CD511968			ILMN_1829064	0006660646	S	164	GCACACAGAGGAAATGTAGAGAGATGATTTTGGAGGCTTAGAGACCACAC	10	-	119178743-119178792		AGENCOURT_14360632 NIH_MGC_186 Homo sapiens cDNA clone IMAGE:30406097 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001716571.1	ILMN_347980	LOC100133666	XM_001716571.1	XM_001716571.1		100133666	169217933	XM_001716571.1	LOC100133666	XP_001716623.1	ILMN_3246004	0004640017	S	210	CGTCCTGGACCTGGATTCTGACTGTGGGTCTGTTCCTGGTTTCCCAGATG					PREDICTED: Homo sapiens hypothetical protein LOC100133666 (LOC100133666), mRNA.					
Homo sapiens	RefSeq	XM_937579.1	ILMN_33325	LOC648526	XM_937579.1	XM_937579.1		648526	89028961	XM_937579.1	LOC648526	XP_942672.1	ILMN_1711087	0006590240	S	9362	CCAGTGTCTACTATTTAGTGCCCTGGCTCTATTTCGGTCCTCCTCCCCGG					PREDICTED: Homo sapiens similar to epiplakin 1 (LOC648526), mRNA.					
Homo sapiens	RefSeq	XR_038097.1	ILMN_336711	LOC441550	XR_038097.1	XR_038097.1		441550	169201964	XR_038097.1	LOC441550		ILMN_3201216	0000110435	A	656	TCATTCGACGTGGTTCGTGTGAAAGATGCCAATGGCAACAGCTTTGCCGC				10p11.22c-p11.22b	PREDICTED: Homo sapiens misc_RNA (LOC441550), miscRNA.					
Homo sapiens	RefSeq	NM_145011.2	ILMN_7672	ZNF25	NM_145011.2	NM_145011.2		219749	24462252	NM_145011.2	ZNF25	NP_659448.1	ILMN_1808765	0006840112	S	3386	CCCCAGCAGAGTTGAGTAGTTGTAGCAGACACCACATGCCCTTGAGCCTA	10	-	38279101-38279150	10p11.21a	Homo sapiens zinc finger protein 25 (ZNF25), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp564C206; KOX19; Zfp9; FLJ31890	DKFZp564C206; KOX19; Zfp9; FLJ31890
Homo sapiens	RefSeq	NM_002370.2	ILMN_19674	MAGOH	NM_002370.2	NM_002370.2		4116	6006021	NM_002370.2	MAGOH	NP_002361.1	ILMN_2215656	0001450156	S	325	TCCTGACCGAGTGGGCCGGCAGGAGCTTGAAATCGTCATTGGAGATGAAC	1	-	53694597-53694626:53699214-53699233	1p32.3c	Homo sapiens mago-nashi homolog, proliferation-associated (Drosophila) (MAGOH), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14973490] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14730019] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10662555] [evidence IPI]	MAGOHA	MAGOHA
Homo sapiens	RefSeq	NM_013271.2	ILMN_8234	PCSK1N	NM_013271.2	NM_013271.2		27344	20336240	NM_013271.2	PCSK1N	NP_037403.1	ILMN_1755582	0004210678	S	604	AGCTGTTGAGGTACTTGCTGGGACGGATTCTTGCGGGAAGCGCGGACTCC	X	-	48689825-48689865:48690279-48690287	Xp11.23c	Homo sapiens proprotein convertase subtilisin/kexin type 1 inhibitor (PCSK1N), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10632593] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10632593] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 10632593] [evidence TAS]	PROSAAS; SAAS	PROSAAS; SAAS
Homo sapiens	RefSeq	XM_001717958.1	ILMN_345528	LOC100131409	XM_001717958.1	XM_001717958.1		100131409	169163065	XM_001717958.1	LOC100131409	XP_001718010.1	ILMN_3287874	0005550670	M	358	TTCTCAGGCCTCACGTGTACCAGCTCTCTGCTCTCCTTTGCCTTGGGACG	2	+	145165141-145165147:145242135-145242177	2q22.3a	PREDICTED: Homo sapiens hypothetical LOC100131409 (LOC100131409), mRNA.					
Homo sapiens	RefSeq	NM_176786.1	ILMN_18307	IL9R	NM_176786.1	NM_176786.1		3581	29171683	NM_176786.1	IL9R	NP_789743.1	ILMN_1794686	0006480056	I	222	ACGGACAGACACTGCTGCAGAGAACTTGCCACGGTGTTTCATGCTGTGGC	Y	+	57743481-57743530	Xq28h,Yq12w	Homo sapiens interleukin 9 receptor (IL9R), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1376929] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1376929] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1376929] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 1376929] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with interleukin-9 to initiate a change in cell activity [goid 4919] [pmid 1376929] [evidence TAS]	CD129	CD129
Homo sapiens	RefSeq	NM_005815.2	ILMN_169273	ZNF443	NM_005815.2	NM_005815.2		10224	31543989	NM_005815.2	ZNF443	NP_005806.1	ILMN_2104967	0006370376	S	2262	CAGTCATCCCTTGATACCTGCTGGGTATTGGTTCCAGCACTCTGTGAGCC	19	-	12401770-12401819	19p13.2a	Homo sapiens zinc finger protein 443 (ZNF443), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9731181] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9731181] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZK1	ZK1
Homo sapiens	RefSeq	NM_004081.4	ILMN_27809	DAZ4	NM_020420.2	NM_020420.2		57135	54292111	NM_020420.2	DAZ4	NP_065153.1	ILMN_1656021	0002760114	S	1	TCAGTCGGCCTGCGCTCCTCAGCCTGGCGGTTCTACCTCCGAGGGTTCGC	Y	+	25389452-25389501	Yq11.223e-q11.23a	Homo sapiens deleted in azoospermia 4 (DAZ4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	DAZ1; DAZ; pDP1681; pDP1680	SPGY; DAZ
Homo sapiens	RefSeq	NM_020364.2	ILMN_27809	DAZ4	NM_020420.2	NM_020420.2		57135	54292111	NM_020420.2	DAZ4	NP_065153.1	ILMN_1754528	0002070400	S	1147	CCTGCTTATCCAAATTCACCAGTTCAGGTCACCACTGGATATCAGTTGCC	Y	+	25424760-25424809	Yq11.223e-q11.23a	Homo sapiens deleted in azoospermia 4 (DAZ4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	DAZ1; DAZ; pDP1681; pDP1680	pDP1679; MGC126441
Homo sapiens	RefSeq	NM_020420.2	ILMN_27809	DAZ4	NM_020420.2	NM_020420.2		57135	54292111	NM_020420.2	DAZ4	NP_065153.1	ILMN_2404951	0000630463	A	1202	ACAATTATCAGGCATTTCCTGCTTATCCAAATTCAGCAGTTCAGGTCACC	Y	+	25424815-25424825:25451223-25451261	Yq11.223e-q11.23a	Homo sapiens deleted in azoospermia 4 (DAZ4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	DAZ1; DAZ; pDP1681; pDP1680	DAZ1; DAZ; pDP1681; pDP1680
Homo sapiens	RefSeq	NM_024048.2	ILMN_29369	MGC3020	NM_024048.2	NM_024048.2		79014	21314710	NM_024048.2	MGC3020	NP_076953.2	ILMN_1656420	0002690189	S	1510	TTCCTGGGAGACCATCCCCCACCTTTCTCCGGCCTCTGAGACTTTGAGTC	16	+	31625980-31626029		Homo sapiens hypothetical protein MGC3020 (MGC3020), mRNA.					
Homo sapiens	RefSeq	NM_015029.1	ILMN_16011	POP1	NM_015029.1	NM_015029.1		10940	23097291	NM_015029.1	POP1	NP_055844.1	ILMN_1768273	0003840397	S	2927	GTGACTCAGGGAGATTTTTCCATGGCTGTTGGCTGTGGAGAAGCCCTGGG	8	+	99239499-99239548	8q22.2a	Homo sapiens processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) (POP1), mRNA.	A ribonucleoprotein complex that cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication [goid 172] [pmid 8918471] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [pmid 8918471] [evidence IDA]	Generation of the mature 5'-end of the tRNA, usually via an endonucleolytic cleavage by RNase P [goid 1682] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis [goid 16078] [pmid 8918471] [evidence IDA]	Catalysis of the site-specific cleavage of RNA by a catalytic RNA_mediated mechanism; substrates include the A3 site in the ITS1 of pre-rRNA [goid 171] [pmid 8918471] [evidence IDA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [pmid 8918471] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15096576] [evidence IPI]	KIAA0061; MGC17365	KIAA0061; MGC17365
Homo sapiens	Unigene	Hs.497591	ILMN_96961	HS.497591	Hs.497591		Hs.497591		34529476	AK123840			ILMN_1838863	0000050543	S	3600	GCCCGTGGACTCCCGGCCTGTTTCTACCTTCTATTCAACCACTCTGACGT	14	-	99048253-99048302		Homo sapiens cDNA FLJ41846 fis, clone NT2RI3003162					
Homo sapiens	RefSeq	NM_152326.2	ILMN_18729	ANKRD9	NM_152326.2	NM_152326.2		122416	50355986	NM_152326.2	ANKRD9	NP_689539.1	ILMN_2048607	0007050370	S	1537	ACTGGCAAAGGCTAGGCCCGGAGCACCCTAGGCGCTGGATTTTGGGACAA	14	-	102973237-102973272:102973273-102973286	14q32.31c	Homo sapiens ankyrin repeat domain 9 (ANKRD9), mRNA.				MGC21990	MGC21990
Homo sapiens	RefSeq	NM_152326.2	ILMN_18729	ANKRD9	NM_152326.2	NM_152326.2		122416	50355986	NM_152326.2	ANKRD9	NP_689539.1	ILMN_1675937	0004730767	S	964	TACAACCGCGTGGGCATTCTGCGCCGCATCCTGCGCACCTTGCGCGACTT	14	-	102973810-102973859	14q32.31c	Homo sapiens ankyrin repeat domain 9 (ANKRD9), mRNA.				MGC21990	MGC21990
Homo sapiens	RefSeq	NM_152718.1	ILMN_18416	VWCE	NM_152718.2	NM_152718.2		220001	114431243	NM_152718.2	VWCE	NP_689931.2	ILMN_1760315	0001450608	S	3351	TCGTTTCCACTGTCAGCATCCTCCCTGGACCGCGTGGCTGGCTCATCTTT	11	-	61025893-61025942	11q12.2b	Homo sapiens von Willebrand factor C and EGF domains (VWCE), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	VWC1; URG11; FLJ32009	URG11; FLJ32009
Homo sapiens	RefSeq	NM_182517.1	ILMN_181250	C1ORF210	NM_182517.1	NM_182517.1		149466	32698863	NM_182517.1	C1orf210	NP_872323.1	ILMN_2196232	0003420435	S	1344	CAGGCGTGAGCCACCATGCCCGGCCAGCTTCTTAATGAAATATTTTCCTA	1	-	43520214-43520263	1p34.2a	Homo sapiens chromosome 1 open reading frame 210 (C1orf210), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC52423	MGC52423
Homo sapiens	Unigene	Hs.245405	ILMN_83114	HS.245405	Hs.245405		Hs.245405		19762982	BQ027703			ILMN_1846162	0006660440	S	337	AGTCTGCTGTTCCAGACTCAACTGGGGGGCATATGGTGCATACATTTGAG	11	-	107531358-107531407		UI-H-CO0-ara-d-07-0-UI.s1 NCI_CGAP_Sub9 Homo sapiens cDNA clone IMAGE:3105827 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002962.1	ILMN_4088	S100A5	NM_002962.1	NM_002962.1		6276	4506766	NM_002962.1	S100A5	NP_002953.1	ILMN_1810857	0007160161	S	342	GGGGAGAGAGGGTAGCAAACTGACCCTGAGTAGGAAGGAACTCAAGGAGC	1	-	153512558-153512607	1q21.3c	Homo sapiens S100 calcium binding protein A5 (S100A5), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	S100D	S100D
Homo sapiens	RefSeq	NM_001042663.1	ILMN_177964	PLEKHG5	NM_001042663.1	NM_001042663.1		57449	111154077	NM_001042663.1	PLEKHG5	NP_001036128.1	ILMN_2358801	0002940209	A	4411	GCTCTACCTTGAAGTGGTTCTCAGGGTTGGGGCGAGAGTCGGGGTGGGGA	1	-	6526452-6526501	1p36.31a	Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	KIAA0720; RP4-650H14.3; GEF720; DSMA4	KIAA0720; RP4-650H14.3; GEF720; DSMA4
Homo sapiens	RefSeq	NM_033112.2	ILMN_5348	C6ORF153	NM_033112.2	NM_033112.2		88745	52851419	NM_033112.2	C6orf153	NP_149103.1	ILMN_1815039	0003130577	S	1065	GAAGAGGGGCCAATGAAAACCATGGAGTCTGTTCGTGACTCCCAGGGCTG	6	+	42997243-42997292	6p21.1d	Homo sapiens chromosome 6 open reading frame 153 (C6orf153), mRNA.				dJ20C7.4	dJ20C7.4
Homo sapiens	RefSeq	NM_147183.2	ILMN_13084	KCNIP4	NM_147183.3	NM_147183.3		80333	78190484	NM_147183.3	KCNIP4	NP_671712.1	ILMN_1787948	0000150025	I	6	CTTGGAAGGGCTTGAAATGATAGCAGTTCTGATCGTCATTGTGCTTTTTG	4	-	21305474-21305523	4p15.31d-p15.31b	Homo sapiens Kv channel interacting protein 4 (KCNIP4), transcript variant 4, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC44947; KCHIP4; CALP	MGC44947; KCHIP4; CALP
Homo sapiens	Unigene	Hs.566395	ILMN_118726	HS.566395	Hs.566395		Hs.566395		2103173	AA424221			ILMN_1878889	0004490707	S	222	CCTACAGGGACCAAAGGTATGTAGCAGAGGGGGCAGGTAGGTGATAAGGT	5	+	21124355-21124404		zv54f06.r1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:757475 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001098844.1	ILMN_308818	FAM23A	NM_001098844.1	NM_001098844.1		653567	150378480	NM_001098844.1	FAM23A	NP_001092314.1	ILMN_3241149	0003800020	S	2641	AGAGTCATGCAACTTGCTTTCACCCTGTTGGGACACTCTGAACAGTCAGC	10	+	17839743-17839792	10p12.33c	Homo sapiens family with sequence similarity 23, member A (FAM23A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			bA16O1.2	bA16O1.2
Homo sapiens	RefSeq	NM_001025233.1	ILMN_27021	CLLU1	NM_001025233.1	NM_001025233.1		574028	68563516	NM_001025233.1	CLLU1	NP_001020404.1	ILMN_2108865	0006280372	S	3593	GCTCTGTCAACTGAAGGTCAAGGCTGGAGTTCTGAAAGCAAAGAGCTGTC	12	+	91348557-91348606	12q22a	Homo sapiens chronic lymphocytic leukemia up-regulated 1 (CLLU1), mRNA.					
Homo sapiens	Unigene	Hs.344872	ILMN_86837	HS.344872	Hs.344872		Hs.344872		13507309	AF339771			ILMN_1848913	0007380240	S	474	TCTGTCCTAAGAGTGGAGCTGGGTGACAGAGCAGGTGCAAGCCGGCCTTT	13	+	98538547-98538596		Homo sapiens clone IMAGE:1257951, mRNA sequence					
Homo sapiens	RefSeq	NM_020677.2	ILMN_24779	NMRAL1	NM_020677.2	NM_020677.2		57407	24476001	NM_020677.2	NMRAL1	NP_065728.1	ILMN_1709814	0000540524	S	1236	GGACCAGTGGCTGGAACAGCACAAAGGGGACTTCAACCTGCTGTGACCTG	16	-	4511771-4511780:4511781-4511820	16p13.3b	Homo sapiens NmrA-like family domain containing 1 (NMRAL1), mRNA.		Any process that modulates the frequency, rate or extent of nitrogen utilization [goid 6808] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]	FLJ25918; HSCARG	FLJ25918; HSCARG
Homo sapiens	RefSeq	NR_003073.1	ILMN_174434	SNORD91B	NR_003073.1	NR_003073.1		692208	96974956	NR_003073.1	SNORD91B		ILMN_3242443	0000870504	S	33	GAACCTGTCTGAAGCATCCCAGTGATGCAACTTCTGTGTGATACTGAGGC	17	-	2232422-2232471	17p13.3c	Homo sapiens small nucleolar RNA, C/D box 91B (SNORD91B), small nucleolar RNA.				HBII-296b	HBII-296b
Homo sapiens	Unigene	Hs.523235	ILMN_100270	HS.523235	Hs.523235		Hs.523235		2563510	AA639731			ILMN_1825955	0000670672	S	172	ATATGCAGTTGGAGGGGCTGAGGGAAGATTCTGGAGGAAAGTGGCTGAGC	10	+	103856765-103856814		nq82a06.s1 NCI_CGAP_Co9 Homo sapiens cDNA clone IMAGE:1158802 3, mRNA sequence					
Homo sapiens	Unigene	Hs.543211	ILMN_106854	HS.543211	Hs.543211		Hs.543211		6641078	AW264336			ILMN_1897160	0001010685	S	266	ATACTGGCTCGGGGGTCTGCTGGCTCGTCCTGGTTCACATCTCCGTTCTT	3	-	27730579-27730628		xq98e07.x1 NCI_CGAP_Brn53 Homo sapiens cDNA clone IMAGE:2758692 3, mRNA sequence					
Homo sapiens	RefSeq	NM_182609.1	ILMN_1082	ZNF677	NM_182609.2	NM_182609.2		342926	142351674	NM_182609.2	ZNF677	NP_872415.1	ILMN_1802093	0002750348	S	3058	TGTGGTCAGGACCCCTTAGAATTGTTGATGTGACTGGGGACCTTTGTCGA	19	-	58430835-58430884	19q13.41b	Homo sapiens zinc finger protein 677 (ZNF677), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC48625	MGC48625
Homo sapiens	RefSeq	XR_015517.2	ILMN_168904	LOC731542	XR_015517.2	XR_015517.2		731542	169167312	XR_015517.2	LOC731542		ILMN_3227321	0003520315	A	877	GTGGTGGTGCATGCCTGTAATCCTAGCTACTCAGGAGGCTCAGGCACGAG					PREDICTED: Homo sapiens misc_RNA (LOC731542), miscRNA.					
Homo sapiens	RefSeq	NM_000160.1	ILMN_182202	GCGR	NM_000160.2	NM_000160.2		2642	142350078	NM_000160.2	GCGR	NP_000151.1	ILMN_1725311	0006100095	S	1948	TGCGTGCCAGTGTCCCCACGTATGTCGGCACGTCCCATGTGCATGGAAAT	17	+	67422-67471		Homo sapiens glucagon receptor (GCGR), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8144028] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8144028] [evidence TAS]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 7773293] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 8144028] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 7773293] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 8563746] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with glucagon to initiate a change in cell activity [goid 4967] [pmid 8144028] [evidence TAS]	GGR; MGC138246	GGR
Homo sapiens	RefSeq	NM_020939.1	ILMN_26147	CPNE5	NM_020939.1	NM_020939.1		57699	25141322	NM_020939.1	CPNE5	NP_065990.1	ILMN_1806500	0002260767	S	2926	CAGATGTGACCCTACTTGAGGCCGCCTTGGCTTTTGGGTCACCCTGTCTC	6	-	36816896-36816945	6p21.2c	Homo sapiens copine V (CPNE5), mRNA.				CPN5; COPN5; DKFZp666C234; KIAA1599	CPN5; COPN5; DKFZp666C234; KIAA1599
Homo sapiens	RefSeq	NM_015174.1	ILMN_308949	ZFR2	NM_015174.1	NM_015174.1		23217	130492453	NM_015174.1	ZFR2	NP_055989.1	ILMN_3242993	0000360156	S	4670	AGGACAGCCTGCATGTGGCTCTGTCTGAATGTCTTTGTAGAGCTACCTGG	19	-	3804124-3804173	19p13.3e	Homo sapiens zinc finger RNA binding protein 2 (ZFR2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_006480.4	ILMN_24426	RGS14	NM_006480.4	NM_006480.4		10636	56682941	NM_006480.4	RGS14	NP_006471.2	ILMN_1696828	0002940471	S	2062	TGCCACCGCCTTGTCCCTCAACAAGCTCACCCCCAATCCCTTGCAGCCAG	5	+	176731861-176731910	5q35.3a	Homo sapiens regulator of G-protein signaling 14 (RGS14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9168931] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	 [goid 5057] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9168931] [evidence TAS]		
Homo sapiens	RefSeq	NM_018337.2	ILMN_22849	ZNF444	NM_018337.2	NM_018337.2		55311	37537686	NM_018337.2	ZNF444	NP_060807.2	ILMN_1727300	0000670242	S	1793	GAGGCTGAAGGAAAGGGGTCTGGGTCTTGTCCCTAGGAATTCTCCTCCCT	19	+	56672012-56672061	19q13.42c	Homo sapiens zinc finger protein 444 (ZNF444), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ11137; EZF-2; EZF2; ZSCAN17	FLJ11137; EZF-2; EZF2; ZSCAN17
Homo sapiens	RefSeq	XR_001116.1	ILMN_42151	LOC554223	XR_001116.1	XR_001116.1		554223	88998671	XR_001116.1	LOC554223		ILMN_1781236	0003170646	A	293	GACCTGGGCAGGCTTCCACTCCTTGAGGTATTTCCACACCACCATGTCCC					PREDICTED: Homo sapiens hypothetical LOC554223, transcript variant 4 (LOC554223), misc RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]			
Homo sapiens	RefSeq	NR_003224.1	ILMN_180871	SNORD114-31	NR_003224.1	NR_003224.1		767612	115392026	NR_003224.1	SNORD114-31		ILMN_3310451	0005260463	S	20	GTGGTGTGTGAGTCATGGAGGATGAATACTAAGTGCCTGGAACTCTGAGG	14	+	100529345-100529394	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 114-31 (SNORD114-31), small nucleolar RNA.				14q(II-31)	14q(II-31)
Homo sapiens	RefSeq	NM_198404.1	ILMN_163085	KCTD4	NM_198404.2	NM_198404.2		386618	146198863	NM_198404.2	KCTD4	NP_940686.2	ILMN_1724893	0006330669	S	1972	CGGCAGGCTACAGGAACCCTGGCTGGTCCTGGAAGTGACAAAAACCAGCA	13	-	45767085-45767134	13q14.12a	Homo sapiens potassium channel tetramerisation domain containing 4 (KCTD4), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	bA321C24.3	bA321C24.3
Homo sapiens	RefSeq	NM_001042370.1	ILMN_173505	TROVE2	NM_001042370.1	NM_001042370.1		6738	108796060	NM_001042370.1	TROVE2	NP_001035829.1	ILMN_2272074	0004220278	I	44	TTGCTGTGGCTGTCGCTGCCCGTCAGGCTGCCTTCTTTTGTCGTTTCCCA	1	+	191295419-191295468	1q31.2b	Homo sapiens TROVE domain family, member 2 (TROVE2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [pmid 3200833] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 3200833] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate [goid 4618] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 3200833] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	SSA2; RO60	SSA2; RO60
Homo sapiens	RefSeq	NM_006551.3	ILMN_6509	SCGB1D2	NM_006551.3	NM_006551.3		10647	73622133	NM_006551.3	SCGB1D2	NP_006542.1	ILMN_1714536	0000520370	S	107	CCAGGCCAATGCCGAGTTCTGCCCAGCTCTTGTTTCTGAGCTGTTAGACT	11	+	61766406-61766410:61767337-61767381	11q12.3a	Homo sapiens secretoglobin, family 1D, member 2 (SCGB1D2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10066439] [evidence TAS]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	LPHB; LIPB	LIPB; LPHB
Homo sapiens	RefSeq	NM_003325.3	ILMN_16765	HIRA	NM_003325.3	NM_003325.3		7290	21536484	NM_003325.3	HIRA	NP_003316.3	ILMN_1813664	0005420431	S	3931	AAGAGACTGTTTTGGGGGAATGGGGCAAAGGGGTGGGCGATTTCTTTTGT	22	-	19318256-19318305	22q11.21b-q11.21c	Homo sapiens HIR histone cell cycle regulation defective homolog A (S. cerevisiae) (HIRA), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9710638] [evidence TAS]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9731536] [evidence TAS]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 7633437] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9731536] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9731536] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11342215] [evidence IPI]	TUP1; TUPLE1; DGCR1	TUP1; TUPLE1; DGCR1
Homo sapiens	RefSeq	NM_181781.2	ILMN_589	ZNF326	NM_181781.2	NM_181781.2		284695	33946292	NM_181781.2	ZNF326	NP_861446.2	ILMN_1669440	0006100121	I	238	GACATTCAAGGATATTTATCTAAAAATTCTTCTTTTGAGTGCCAGTAAAG	1	+	90243190-90243239	1p22.2b	Homo sapiens zinc finger protein 326 (ZNF326), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20403; dJ871E2.1; ZAN75; Zfp326; MGC61591	FLJ20403; dJ871E2.1; ZAN75; Zfp326; MGC61591
Homo sapiens	RefSeq	XR_037748.1	ILMN_350413	LOC728278	XR_037748.1	XR_037748.1		728278	169208525	XR_037748.1	LOC728278		ILMN_3247705	0001770356	S	79	CAGAGTATTGGTAAAGATAGCATTGCTTGGTCATCGTGTTCTGAGTGGTC	15	-	26623553-26623585:26627612-26627628	15q13.1b	PREDICTED: Homo sapiens misc_RNA (LOC728278), miscRNA.					
Homo sapiens	RefSeq	NM_022162.1	ILMN_19504	NOD2	NM_022162.1	NM_022162.1		64127	11545911	NM_022162.1	NOD2	NP_071445.1	ILMN_1762594	0000940220	S	4079	CTGGGCCAGAATTTCAAACGGCCTCACTAGGCTTCTGGTTGATGCCTGTG	16	+	49324082-49324131	16q12.1c	Homo sapiens nucleotide-binding oligomerization domain containing 2 (NOD2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15967716] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15998797] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15998797] [evidence IDA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [pmid 17337451] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 16714539] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [pmid 15998797] [evidence IDA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2224] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus during an immune response, resulting in an increase in its intracellular or extracellular levels [goid 2367] [pmid 16260731] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 15653568] [evidence IDA]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [pmid 15653568] [evidence IDA]; The series of events in which a muramyl dipeptide stimulus is received by a cell and converted into a molecular signal. Muramyl dipeptide is derived from peptidoglycan [goid 32498] [pmid 15998797] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-17 production [goid 32740] [pmid 17919942] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 15653568] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 11087742] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 17690884] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [pmid 15107016] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 11385577] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [pmid 15967716] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 15753091] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 15075345] [evidence IPI]; Interacting selectively, in a non-covalent manner, with muramyl dipeptide; muramyl dipeptide is derived from peptidoglycan [goid 32500] [pmid 15998797] [evidence IDA]; Interacting selectively with a CARD (N-terminal caspase recruitment) domain, a protein-protein interaction domain that belongs to the death domain-fold superfamily. These protein molecule families are similar in structure with each consisting of six or seven anti-parallel alpha-helices that form highly specific homophilic interactions between signaling partners. CARD exists in the N-terminal prodomains of several caspases and in apoptosis-regulatory proteins and mediates the assembly of CARD-containing proteins that participate in activation or suppression of CARD carrying members of the caspase family [goid 50700] [pmid 11087742] [evidence IPI]	NLRC2; CD; CARD15; PSORAS1; CLR16.3; ACUG; NOD2B; BLAU; IBD1	NLRC2; CD; CARD15; PSORAS1; CLR16.3; ACUG; NOD2B; BLAU; IBD1
Homo sapiens	RefSeq	XM_942935.1	ILMN_32649	LOC647681	XM_942935.1	XM_942935.1		647681	89025933	XM_942935.1	LOC647681	XP_948028.1	ILMN_1652550	0000940008	S	3376	CACACCCAGCTCTTGTCTGTAAGTGGCCTCTGCAGGAGCAAAACTGCCTC					PREDICTED: Homo sapiens hypothetical protein LOC647681 (LOC647681), mRNA.					
Homo sapiens	RefSeq	NM_017454.2	ILMN_23551	STAU1	NM_017454.2	NM_017454.2		6780	82659088	NM_017454.2	STAU1	NP_059348.2	ILMN_2327276	0005890349	A	2995	GCTCTGCGTGTGGTCCGTATGGAAAGCCTGGTAGCCCTGCGAGTTAAGTA	20	-	47730151-47730200	20q13.13c	Homo sapiens staufen, RNA binding protein, homolog 1 (Drosophila) (STAU1), transcript variant T1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae [goid 5791] [pmid 10022909] [evidence TAS]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 10022909] [evidence TAS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process by which mRNA is transported to, or maintained in, a specific location within the cell [goid 8298] [evidence IEA]	Interacting selectively with double-stranded RNA [goid 3725] [pmid 10022909] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15680326] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15303970] [evidence IPI]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	FLJ25010; STAU	FLJ25010; STAU
Homo sapiens	RefSeq	NR_002599.1	ILMN_9864	SNHG6	NR_002599.1	NR_002599.1		641638	82830392	NR_002599.1	SNHG6		ILMN_3248443	0005720520	S	21	AGGGAGGAAGAAGCGCGAAGAGCCGTTAGTCATGCCGGTGTGGTGGCGGC	8	-	68000261-68000310	8q13.1b	Homo sapiens small nucleolar RNA host gene 6 (non-protein coding) (SNHG6), non-coding RNA.				HBII-276HG; U87HG	HBII-276HG; U87HG
Homo sapiens	RefSeq	NM_015979.2	ILMN_8939	MED23	NM_015979.2	NM_015979.2		9439	28558968	NM_015979.2	MED23	NP_057063.2	ILMN_1662488	0006330491	I	4287	CAGCAAGGGTTCCAAATTAAGAGGAAGCAAAACGCTGCCCAGATCCTGAG	6	-	131949296-131949345	6q23.2a	Homo sapiens mediator complex subunit 23 (MED23), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 9989412] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9989412] [evidence TAS]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 9989412] [evidence TAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9989412] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17438371] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [pmid 9989412] [evidence IDA]	MED23; DKFZp434H0117; CRSP3; DRIP130; CRSP133; CRSP130; SUR2	MED23; DKFZp434H0117; CRSP3; DRIP130; CRSP133; CRSP130; SUR2
Homo sapiens	RefSeq	NM_015979.2	ILMN_8939	MED23	NM_015979.2	NM_015979.2		9439	28558968	NM_015979.2	MED23	NP_057063.2	ILMN_1674506	0003370519	A	4216	GCAGTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAA	6	-	131950545-131950594	6q23.2a	Homo sapiens mediator complex subunit 23 (MED23), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 9989412] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9989412] [evidence TAS]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 9989412] [evidence TAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9989412] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17438371] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [pmid 9989412] [evidence IDA]	MED23; DKFZp434H0117; CRSP3; DRIP130; CRSP133; CRSP130; SUR2	MED23; DKFZp434H0117; CRSP3; DRIP130; CRSP133; CRSP130; SUR2
Homo sapiens	RefSeq	NM_182687.1	ILMN_172986	PKMYT1	NM_182687.1	NM_182687.1		9088	33383238	NM_182687.1	PKMYT1	NP_872629.1	ILMN_2401436	0002940164	A	1702	GTTTGCTCCTGGACAGCAGCCTCTCCAGCAACTGGGATGACGACAGCCTA	16	-	3024002-3024051	16p13.3d	Homo sapiens protein kinase, membrane associated tyrosine/threonine 1 (PKMYT1), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9001210] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12738781] [evidence EXP]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9001210] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9001210] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9001210] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 9001210] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10373560] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MYT1; DKFZp547K1610; FLJ20093	MYT1; DKFZp547K1610; FLJ20093
Homo sapiens	Unigene	Hs.538116	ILMN_103714	HS.538116	Hs.538116		Hs.538116		3765215	AI206543			ILMN_1887508	0004640154	S	91	CTCAGGCCACACGCGGTCCATTCCACAAACCTTCCTCAGAGCCAAAGTAC	1	+	44270888-44270937		qf60h03.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1754453 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004053.3	ILMN_12188	BYSL	NM_004053.3	NM_004053.3		705	51173723	NM_004053.3	BYSL	NP_004044.3	ILMN_1682792	0004860356	S	1739	CTGAAGACCCAGATCAGGGCAGTGACAGATCACAGGGACATCTGTGGCTC	6	+	41900533-41900582	6p21.1f	Homo sapiens bystin-like (BYSL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9560222] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9560222] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 9560222] [evidence TAS]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		BYSTIN	BYSTIN
Homo sapiens	RefSeq	XM_931381.1	ILMN_38706	LOC643176	XM_931381.1	XM_931381.1		643176	89036834	XM_931381.1	LOC643176	XP_936474.1	ILMN_1789109	0004920152	S	664	GGCTCCGCGCCGGCTCTTCTCCTTGTCAGTTTACCAGGTTTGACCGCCCA	13	+	97594026-97594037:97594759-97594796		PREDICTED: Homo sapiens hypothetical protein LOC643176 (LOC643176), mRNA.					
Homo sapiens	RefSeq	NM_020995.3	ILMN_169425	HPR	NM_020995.3	NM_020995.3		3250	45580722	NM_020995.3	HPR	NP_066275.3	ILMN_1809212	0003840608	S	681	AGGGCGTGTGGGTTACGTGTCTGGCTGGGGACAAAGTGACAACTTTAAAC	16	+	70668085-70668134	16q22.3a	Homo sapiens haptoglobin-related protein (HPR), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [pmid 2987228] [evidence NAS]	A-259H10.2; HP	A-259H10.2; HP
Homo sapiens	RefSeq	NM_020995.3	ILMN_169425	HPR	NM_020995.3	NM_020995.3		3250	45580722	NM_020995.3	HPR	NP_066275.3	ILMN_2155452	0003440408	S	787	ACGCATTATGAAGGCAGCACATGCCCCAAATGGAAGGCACCGAAGAGCCC	16	+	70668191-70668240	16q22.3a	Homo sapiens haptoglobin-related protein (HPR), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [pmid 2987228] [evidence NAS]	A-259H10.2; HP	A-259H10.2; HP
Homo sapiens	Unigene	Hs.208715	ILMN_82048	HS.208715	Hs.208715		Hs.208715		27844400	BX100285			ILMN_1848906	0000620037	S	264	GACTCGCTATCCAGCCGCCCCCTTTGCTGTCGATTTGGAAGTCACTCGTT	9	-	130172893-130172942		BX100285 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998L095850, mRNA sequence					
Homo sapiens	RefSeq	NM_207378.1	ILMN_29856	SERPINA13	NM_207378.2	NM_207378.2		388007	127139915	NM_207378.2	SERPINA13	NP_997261.2	ILMN_1743046	0005260270	S	1353	CTGAGTTCAGTCGGCCCTTCCTGGTGATGACTTTCCACACGGAAACAGGA	14	+	94182719-94182768	14q32.13b	Homo sapiens serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 13 (pseudogene) (SERPINA13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	UNQ6121	UNQ6121
Homo sapiens	RefSeq	XR_037780.1	ILMN_348998	LOC732199	XR_037780.1	XR_037780.1		732199	169202828	XR_037780.1	LOC732199		ILMN_3228171	0006200372	A	524	AGGTATCTGCCTGCCAACGTGAGGACACAAGGACTGGTGCAACCTGCCCA				11p15.1e	PREDICTED: Homo sapiens misc_RNA (LOC732199), miscRNA.					
Homo sapiens	RefSeq	XM_940241.1	ILMN_139176	CDRT1	XM_940241.1	XM_940241.1		374286	89061866	XM_940241.1	CDRT1	XP_945334.1	ILMN_1678183	0004610600	I	819	CCCCAGAAAATGAACACTTCCTTGGGGCAGCATCTAACCCTGGTAAGTGA				17p12a	PREDICTED: Homo sapiens CMT1A duplicated region transcript 1 (CDRT1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_005372.1	ILMN_25679	MOS	NM_005372.1	NM_005372.1		4342	4885488	NM_005372.1	MOS	NP_005363.1	ILMN_1760479	0002510328	S	795	TGCCATCACTCTCTGGCAAATGACTACCAAGCAGGCGCCGTATTCGGGGG	8	-	57188251-57188300	8q12.1b	Homo sapiens v-mos Moloney murine sarcoma viral oncogene homolog (MOS), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC119962; MGC119963; MSV	MGC119962; MGC119963; MSV
Homo sapiens	RefSeq	NM_013237.2	ILMN_28597	PRELID1	NM_013237.2	NM_013237.2		27166	31543450	NM_013237.2	PRELID1	NP_037369.1	ILMN_2179652	0006220379	S	975	TCATGTCTGAGCCAGGTCTGCTTATTCTCCCATTGGGCAGCTGAGGACCG	5	+	176666340-176666389	5q35.3a	Homo sapiens PRELI domain containing 1 (PRELID1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10784606] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10784606] [evidence TAS]		CGI-106; PRELI; PX19; MGC87972	CGI-106; PRELI; PX19; MGC87972
Homo sapiens	RefSeq	XM_941314.1	ILMN_31734	LOC646498	XM_941314.1	XM_941314.1		646498	88969055	XM_941314.1	LOC646498	XP_946407.1	ILMN_1687170	0005810768	S	12	GGGCACTACAGAAGCCAATTCAAGAACCAGTTCTTGCCTCTCCCAGAACC				3p21.31d	PREDICTED: Homo sapiens hypothetical LOC646498 (LOC646498), mRNA.					
Homo sapiens	RefSeq	XM_001128282.2	ILMN_167700	LOC728138	XM_001128282.2	XM_001128282.2		728138	169209809	XM_001128282.2	LOC728138	XP_001128282.1	ILMN_3214686	0007570338	A	1824	AAGAGTGGCTGCAAGGGGCTGGTGAAGTTCCAGGCCGACCCCGACGTGCT	16	-	14990091-14990114:14990190-14990215	16p13.11b	PREDICTED: Homo sapiens hypothetical LOC728138 (LOC728138), mRNA.					
Homo sapiens	RefSeq	XM_930086.1	ILMN_178262	LOC728772	XM_001133066.1	XM_001133066.1		728772	113427128	XM_001133066.1	LOC728772	XP_001133066.1	ILMN_1807413	0000050619	I	265	CATGTAGCCCAGGAATCGGCTTGGCCCTTCGGGGAGGTCAGCGTCCTTAC	17	+	20638-20687		PREDICTED: Homo sapiens similar to transmembrane protein 106A, transcript variant 2 (LOC728772), mRNA.					
Homo sapiens	RefSeq	NM_000640.2	ILMN_20214	IL13RA2	NM_000640.2	NM_000640.2		3598	26787976	NM_000640.2	IL13RA2	NP_000631.1	ILMN_1688722	0005420386	S	1197	GTAACCGGTCTGCTTTTGCGTAAGCCAAACACCTACCCAAAAATGATTCC	X	-	114238664-114238669:114239760-114239803	Xq23c	Homo sapiens interleukin 13 receptor, alpha 2 (IL13RA2), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9083087] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9083087] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [pmid 9725226] [evidence TAS]	IL-13R; CD213A2; IL13BP	IL-13R; CD213A2; IL13BP
Homo sapiens	RefSeq	NM_020121.2	ILMN_21506	UGCGL2	NM_020121.2	NM_020121.2		55757	11386200	NM_020121.2	UGCGL2	NP_064506.2	ILMN_1788387	0004010187	S	4672	CCTGCTGGGGAAGTCTGGAGCCCCTGCTGAGACGATTTGGAAGTCTCGTT	13	-	95251945-95251994	13q32.1b	Homo sapiens UDP-glucose ceramide glucosyltransferase-like 2 (UGCGL2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence ISS]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins [goid 3980] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins [goid 3980] [evidence IEA]; Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins [goid 3980] [evidence IEA]; Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins [goid 3980] [evidence IEA]	MGC87276; FLJ11485; MGC150689; HUGT2; MGC117360; FLJ10873	MGC87276; FLJ11485; MGC150689; HUGT2; MGC117360; FLJ10873
Homo sapiens	RefSeq	NM_002253.1	ILMN_182717	KDR	NM_002253.1	NM_002253.1		3791	11321596	NM_002253.1	KDR	NP_002244.1	ILMN_1686405	0005270452	S	5365	CCCCCTGTCCCCAACCCACTCTCACCCCGCAACCCATCAGTATTTTAGTT	4	-	55639823-55639872	4q12c	Homo sapiens kinase insert domain receptor (a type III receptor tyrosine kinase) (KDR), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1656371] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IEA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 7929439] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 7929439] [evidence IDA]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 45446] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IEA]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50927] [pmid 7929439] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [pmid 1417831] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]	VEGFR2; CD309; FLK1; VEGFR	VEGFR2; CD309; FLK1; VEGFR
Homo sapiens	RefSeq	NM_006493.1	ILMN_23994	CLN5	NM_006493.1	NM_006493.1		1203	5729771	NM_006493.1	CLN5	NP_006484.1	ILMN_1778203	0001740040	S	3899	GTACAGGCTTTTAGCACCGAAGTGTGGTCCTCAGACCAGTGCCTGCCAAC	13	+	76474488-76474537	13q22.3a	Homo sapiens ceroid-lipofuscinosis, neuronal 5 (CLN5), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 12134079] [evidence IDA]; The volume enclosed within the vacuolar membrane [goid 5775] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12134079] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12134079] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12134079] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9662406] [evidence NAS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 10992246] [evidence IDA]	Any process that reduces the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion [goid 7042] [pmid 11722572] [evidence IMP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10992246] [evidence IEP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Generation of cells within the nervous system [goid 22008] [pmid 10992246] [evidence IEP]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 10740217] [evidence NAS]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [pmid 10992246] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12134079] [evidence IPI]	FLJ90628; NCL	FLJ90628; NCL
Homo sapiens	RefSeq	NM_018996.2	ILMN_14488	TNRC6C	NM_018996.2	NM_018996.2		57690	33413424	NM_018996.2	TNRC6C	NP_061869.2	ILMN_1746871	0003310494	S	4717	CCCCAGATTGATGGTTCTACACTGCGGACATTGTGTTTGCAACATGGGCC	17	+	73610215-73610220:73611090-73611133	17q25.3a	Homo sapiens trinucleotide repeat containing 6C (TNRC6C), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	KIAA1582; FLJ20015	KIAA1582; FLJ20015
Homo sapiens	RefSeq	XM_001722466.1	ILMN_345625	LOC100129186	XM_001722466.1	XM_001722466.1		100129186	169167888	XM_001722466.1	LOC100129186	XP_001722518.1	ILMN_3265193	0004050538	M	802	CGGCAAGACTCCAGCTCAGAAGGTGGGAATGATGGCAAAAGTCCGCTACC				5p12c	PREDICTED: Homo sapiens hypothetical protein LOC100129186 (LOC100129186), mRNA.					
Homo sapiens	Unigene	Hs.495041	ILMN_96740	HS.495041	Hs.495041		Hs.495041		2054922	AA401046			ILMN_1880342	0007650121	S	203	CCTCCAGTGGTTTAGGCAGGACCCTGGGAAAGGTCTCACATCTCTGTTGC	14	+	21590974-21591023		zu50f04.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone IMAGE:741439 5 similar to gb:M12959 T-CELL RECEPTOR ALPHA CHAIN C REGION (HUMAN);, mRNA sequence					
Homo sapiens	RefSeq	NM_001618.2	ILMN_3056	PARP1	NM_001618.2	NM_001618.2		142	11496989	NM_001618.2	PARP1	NP_001609.1	ILMN_1686871	0004280692	S	3509	ACCAAAGCTTCGTTAGAATGTCTGCCTTACTGGTTTCCCCAGGGAAGGAA	1	-	224615431-224615480	1q42.12d	Homo sapiens poly (ADP-ribose) polymerase family, member 1 (PARP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2513174] [evidence TAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 9518481] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9518481] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 16107709] [evidence IDA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IEA]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; Any process that modulates the rate of growth of all or part of an organism [goid 40009] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 10958667] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10944198] [evidence TAS]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 2513174] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2513174] [evidence TAS]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [pmid 16107709] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14734561] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 16107709] [evidence IPI]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	PARP-1; PARP; pADPRT-1; ADPRT1; ADPRT; PPOL	PARP-1; PARP; pADPRT-1; ADPRT1; ADPRT; PPOL
Homo sapiens	RefSeq	NM_016019.1	ILMN_3460	LUC7L2	NM_016019.2	NM_016019.2		51631	116812576	NM_016019.2	LUC7L2	NP_057103.2	ILMN_1747099	0001340703	S	2216	CTGTTGAATTGCTATGTTCAGGATGTTCTAGGGGGTGGGGGCAGGGACTC	7	+	138758289-138758338	7q34b	Homo sapiens LUC7-like 2 (S. cerevisiae) (LUC7L2), mRNA.				FLJ10657; CGI-74; CGI-59; LUC7B2	FLJ10657; CGI-74; CGI-59
Homo sapiens	RefSeq	NM_006588.2	ILMN_4449	SULT1C4	NM_006588.2	NM_006588.2		27233	28830307	NM_006588.2	SULT1C4	NP_006579.2	ILMN_1772148	0004610593	S	1170	GGGCAGTGGGAGACTGGAAGAAACACTTCACCGTGGCTCAGAATGAGAGA	2	+	108370208-108370257	2q12.3c	Homo sapiens sulfotransferase family, cytosolic, 1C, member 4 (SULT1C4), mRNA.				MGC149521; MGC34422; SULT1C2; SULT1C	MGC149521; MGC34422; SULT1C2; SULT1C
Homo sapiens	RefSeq	NM_001005502.1	ILMN_8495	CPM	NM_001005502.1	NM_001005502.1		1368	53832020	NM_001005502.1	CPM	NP_001005502.1	ILMN_2299795	0002510152	A	6463	CAGGCGTGAGCCCCCGCGCCCAGCCACTTTCTTTAATACTATAACTAAGA	12	-	67531346-67531395	12q15b	Homo sapiens carboxypeptidase M (CPM), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7797563] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 7797563] [evidence TAS]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 2753907] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001005502.1	ILMN_8495	CPM	NM_001005502.1	NM_001005502.1		1368	53832020	NM_001005502.1	CPM	NP_001005502.1	ILMN_1709440	0001980719	A	5930	CCTCATGACTTTAGAAGGGGGAAGGGGGAGAAAATTATGATGACCAGACT	12	-	67531879-67531928	12q15b	Homo sapiens carboxypeptidase M (CPM), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7797563] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 7797563] [evidence TAS]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 2753907] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_174873.1	ILMN_10518	P2RX2	NM_174873.1	NM_174873.1		22953	28416922	NM_174873.1	P2RX2	NP_777362.1	ILMN_1706497	0002470148	A	1131	ATTTGACAAGATGGTGGACACTCCTGCCTCCGAGCCTGCCCAAGCCTCCA	12	+	131708346-131708355:131708557-131708596	12q24.33d	Homo sapiens purinergic receptor P2X, ligand-gated ion channel, 2 (P2RX2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The process by which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the carotid bodies [goid 3029] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; Any process that increases the rate of the directed movement of calcium ions into the cytosol of a cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 10524] [pmid 17895406] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [pmid 17895406] [evidence NAS]	Combining with a purine nucleotide to initiate a change in cell activity [goid 1614] [pmid 17895406] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [pmid 17895406] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts [goid 15276] [pmid 9119082] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 17895406] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 17895406] [evidence NAS]	MGC129601; P2X2	MGC129601; P2X2
Homo sapiens	RefSeq	XM_936449.1	ILMN_10518	P2RX2	NM_174873.1	NM_174873.1		22953	28416922	NM_174873.1	P2RX2	NP_777362.1	ILMN_1669239	0006330603	A	1130	AATTTGACAAGATGGTGGACACTCCTGCCTCCGAGCCTGCCCAAGCCTCC	12	+	131708345-131708355:131708557-131708595	12q24.33d	Homo sapiens purinergic receptor P2X, ligand-gated ion channel, 2 (P2RX2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The process by which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the carotid bodies [goid 3029] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; Any process that increases the rate of the directed movement of calcium ions into the cytosol of a cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 10524] [pmid 17895406] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [pmid 17895406] [evidence NAS]	Combining with a purine nucleotide to initiate a change in cell activity [goid 1614] [pmid 17895406] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [pmid 17895406] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts [goid 15276] [pmid 9119082] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 17895406] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 17895406] [evidence NAS]	MGC129601; P2X2	
Homo sapiens	RefSeq	NR_031665.1	ILMN_388593	MIR1263	NR_031665.1	NR_031665.1		100302148	269847340	NR_031665.1	MIR1263		ILMN_3308658	0000240328	S	15	GTACCCTGGCATACTGAGTATTTTAATACTGGCATACTCAGTATGCCATG					Homo sapiens microRNA 1263 (MIR1263), microRNA.					
Homo sapiens	RefSeq	NR_029714.1	ILMN_387921	MIR320A	NR_029714.1	NR_029714.1		407037	262205473	NR_029714.1	MIR320A		ILMN_3309099	0002230484	S	32	CTTCCCGGAGTCGGGAAAAGCTGGGTTGAGAGGGCGAAAAAGGATGAGGT				8p21.3a	Homo sapiens microRNA 320a (MIR320A), microRNA.					
Homo sapiens	RefSeq	NM_019104.1	ILMN_11408	LIN37	NM_019104.1	NM_019104.1		55957	28144915	NM_019104.1	LIN37	NP_061977.1	ILMN_1656886	0004390066	S	698	AGCCCTCTGAGCCCGAGCCCTCACCCTCCACACTCATCTATCGCAACATG	19	+	36245057-36245058:36245147-36245194	19q13.12a	Homo sapiens lin-37 homolog (C. elegans) (LIN37), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	ZK418.4; MGC9505; lin-37; F25965	ZK418.4; MGC9505; lin-37; F25965
Homo sapiens	RefSeq	NM_018112.1	ILMN_12896	TMEM38B	NM_018112.1	NM_018112.1		55151	8922460	NM_018112.1	TMEM38B	NP_060582.1	ILMN_2093980	0000610315	S	1955	CTAGTGGCTACTGTTTTAGTTTTCTAGTTGAATATCTCTGACAAGCTTTC	9	+	107577144-107577193	9q31.2a	Homo sapiens transmembrane protein 38B (TMEM38B), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IEA]	RP11-219P18.1; FLJ10493; D4Ertd89e; C9orf87; bA219P18.1	RP11-219P18.1; FLJ10493; D4Ertd89e; C9orf87; bA219P18.1
Homo sapiens	RefSeq	NM_018112.1	ILMN_12896	TMEM38B	NM_018112.1	NM_018112.1		55151	8922460	NM_018112.1	TMEM38B	NP_060582.1	ILMN_1669940	0007550243	S	904	CCTTCCAATGGCGTTGGGTCATTGGCCTCAAAGCCGGTAGATGTTGCCTC	9	+	107576093-107576142	9q31.2a	Homo sapiens transmembrane protein 38B (TMEM38B), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of inorganic cations with a valency of one into, out of, within or between cells. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage [goid 15672] [evidence IEA]	Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IEA]	RP11-219P18.1; FLJ10493; D4Ertd89e; C9orf87; bA219P18.1	RP11-219P18.1; FLJ10493; D4Ertd89e; C9orf87; bA219P18.1
Homo sapiens	RefSeq	NM_001017436.1	ILMN_23269	CT45A4	NM_001017436.1	NM_001017436.1		441520	62945407	NM_001017436.1	CT45A4	NP_001017436.1	ILMN_1672783	0005820551	S	906	AATGGAGCAGGATATTGCTGAAGTCTCCTGGCATATGTTACCGAATCAAA	X	-	134928749-134928798	Xq26.3b	Homo sapiens cancer/testis antigen family 45, member A4 (CT45A4), mRNA.					
Homo sapiens	RefSeq	NM_001017436.1	ILMN_23269	CT45A4	NM_001017436.1	NM_001017436.1		441520	62945407	NM_001017436.1	CT45A4	NP_001017436.1	ILMN_2135944	0007510128	S	921	TGCTGAAGTCTCCTGGCATATGTTACCGAATCAAATAGCCTTCCAGAGGC	X	-	134928734-134928783	Xq26.3b	Homo sapiens cancer/testis antigen family 45, member A4 (CT45A4), mRNA.					
Homo sapiens	RefSeq	NM_001017435.1	ILMN_23269	CT45A4	NM_001017436.1	NM_001017436.1		441520	62945407	NM_001017436.1	CT45A4	NP_001017436.1	ILMN_1757689	0001230603	S	813	TGAGAATACTTGTCCCTGGAGGATTATCACACCCCAAATGCATAATCTCG	X	-	134928842-134928889:134928890-134928891	Xq26.3b	Homo sapiens cancer/testis antigen family 45, member A4 (CT45A4), mRNA.					RP13-36C9.1
Homo sapiens	Unigene	Hs.538299	ILMN_103812	HS.538299	Hs.538299		Hs.538299		2884266	AA814670			ILMN_1879488	0006220465	S	215	CACAATAGAAAGGGGCTTCTGTTTCTTAGAGAGCTTGCAGAGGACCAATC	10	+	125725757-125725806		ob97f11.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:1339341 3, mRNA sequence					
Homo sapiens	RefSeq	NR_001539.1	ILMN_8365	TTTY22	NR_001539.1	NR_001539.1		252954	32563541	NR_001539.1	TTTY22		ILMN_3249639	0000270494	S	276	CCCAAGACGATGGAGGAGTGTCACCTCACAACATGAAGCACCCACTCAGC	Y	+	9646928-9646977	Yp11.2b	Homo sapiens testis-specific transcript, Y-linked 22 (non-protein coding) (TTTY22), non-coding RNA.					
Homo sapiens	RefSeq	XM_373543.4	ILMN_164513	LOC387876	XM_373543.4	XM_373543.4		387876	113423455	XM_373543.4	LOC387876	XP_373543.3	ILMN_3219443	0001400639	A	786	CCTGGATAGACCTCCCAAGGAGACAGAACCTATGGTTTTATTGTTGTATG	12	+	95710375-95710408:95729645-95729660	12q23.1a	PREDICTED: Homo sapiens similar to mCG112958 (LOC387876), mRNA.					
Homo sapiens	RefSeq	NM_001124758.1	ILMN_356736	SPNS2	NM_001124758.1	NM_001124758.1		124976	185136020	NM_001124758.1	SPNS2	NP_001118230.1	ILMN_3301749	0001110537	M	3253	ACCCCCACTCCAGCCTCAGCGGGGCCCCAGCGATGTTTTCTTGTTGTACA	17	+	4442132-4442181	17p13.2c	Homo sapiens spinster homolog 2 (Drosophila) (SPNS2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Homo sapiens	RefSeq	XM_001716955.1	ILMN_343462	LOC100133667	XM_001716955.1	XM_001716955.1		100133667	169161501	XM_001716955.1	LOC100133667	XP_001717007.1	ILMN_3242473	0007400754	S	153	GGTGTTTGGCCAGTGACCAGGAGTCAGGTCAAGTCCAGGTGGTCAGTGCC					PREDICTED: Homo sapiens hypothetical protein LOC100133667 (LOC100133667), mRNA.					
Homo sapiens	RefSeq	NM_145036.2	ILMN_173004	CCDC46	NM_145036.2	NM_145036.2		201134	82880655	NM_145036.2	CCDC46	NP_659473.2	ILMN_2369756	0006400161	A	2947	GATGCCAGCATCCCTAAGACAAGAACTTGAAGACACCATTTCCTCCCTAA	17	-	61067551-61067600	17q24.1a-q24.2a	Homo sapiens coiled-coil domain containing 46 (CCDC46), transcript variant 1, mRNA.				FLJ39610; MGC33887	FLJ39610; MGC33887
Homo sapiens	RefSeq	NM_145036.2	ILMN_173004	CCDC46	NM_145036.2	NM_145036.2		201134	82880655	NM_145036.2	CCDC46	NP_659473.2	ILMN_2273331	0004010010	I	2357	CGAGATGCACAGGTTATTGCCGACATGGAGGCCCAGGTTCACAAGTTGAG	17	-	61278576-61278614:61328732-61328742	17q24.1a-q24.2a	Homo sapiens coiled-coil domain containing 46 (CCDC46), transcript variant 1, mRNA.				FLJ39610; MGC33887	FLJ39610; MGC33887
Homo sapiens	RefSeq	NM_004516.2	ILMN_12252	ILF3	NM_004516.2	NM_004516.2		3609	24234752	NM_004516.2	ILF3	NP_004507.2	ILMN_1669584	0003360689	I	2460	CTGTGCTTCACTGGGTTTCTCAACCGTGGCTTTTCACCGCAGCTTGTCTG	19	+	10656226-10656275	19p13.2b	Homo sapiens interleukin enhancer binding factor 3, 90kDa (ILF3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10400669] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11739746] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	Progression through M phase, the part of the cell cycle comprising nuclear division [goid 279] [pmid 8885239] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11739746] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11739746] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10574923] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7519613] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 10574923] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11739746] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10574923] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442054] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 11739746] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 11739746] [evidence IDA]	NF-AT-90; NFAR-1; NFAR; MPHOSPH4; TCP80; MMP4; DRBF; NF90; MPP4; DRBP76	NF-AT-90; NFAR-1; NFAR; MPHOSPH4; TCP80; MMP4; DRBF; NF90; MPP4; DRBP76
Homo sapiens	RefSeq	NM_024717.3	ILMN_3078	MCTP1	NM_024717.3	NM_024717.3		79772	50582984	NM_024717.3	MCTP1	NP_078993.3	ILMN_1738097	0001170470	I	587	AGAAGAGCTCCTCTCTGCCGGGCACCGCCTGCCTGGAGCAGCTGCTGGAG	5	-	94645399-94645448	5q15c	Homo sapiens multiple C2 domains, transmembrane 1 (MCTP1), transcript variant L, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 15528213] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15528213] [evidence IDA]	A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 15528213] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 15528213] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [pmid 15528213] [evidence IDA]	FLJ22344	FLJ22344
Homo sapiens	RefSeq	NM_001002796.1	ILMN_3078	MCTP1	NM_024717.3	NM_024717.3		79772	50582984	NM_024717.3	MCTP1	NP_078993.3	ILMN_1654685	0003360491	A	2757	GGCCATTGTAGCCCTCTGTGTGTTCACAGCCATCCTGTACTGCATTCCGC	5	-	94072302-94072351	5q15c	Homo sapiens multiple C2 domains, transmembrane 1 (MCTP1), transcript variant L, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 15528213] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15528213] [evidence IDA]	A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 15528213] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 15528213] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [pmid 15528213] [evidence IDA]	FLJ22344	FLJ22344
Homo sapiens	RefSeq	XM_001724838.1	ILMN_347831	LOC100128922	XM_001724838.1	XM_001724838.1		100128922	169160637	XM_001724838.1	LOC100128922	XP_001724890.1	ILMN_3267831	0005390521	M	135	CCAGAACTCTTCATTGTTTACATACATTTTAGCCTTGGTGCCATTTTCAG				1p33c	PREDICTED: Homo sapiens hypothetical protein LOC100128922 (LOC100128922), mRNA.					
Homo sapiens	Unigene	Hs.452702	ILMN_93818	HS.452702	Hs.452702		Hs.452702		34191349	BC035064			ILMN_1860196	0004880753	S	1388	CCCTGGGAACTTATCAAAAATGCAAGGTCTCAAGCCCTACCCCCAGACCC	3	-	32253623-32253672		Homo sapiens cDNA clone IMAGE:5259414					
Homo sapiens	RefSeq	XM_942789.1	ILMN_37118	LOC339529	XM_942789.1	XM_942789.1		339529	88952917	XM_942789.1	LOC339529	XP_947882.1	ILMN_1726649	0002900682	A	1699	TTTGCCCAGTTGAAAGGTCTCCTGGCAGGTTGGTTAGCAACAGGCTTGCC					PREDICTED: Homo sapiens hypothetical protein LOC339529 (LOC339529), mRNA.					
Homo sapiens	RefSeq	NM_002548.1	ILMN_19391	OR1D2	NM_002548.1	NM_002548.1		4991	4505516	NM_002548.1	OR1D2	NP_002539.1	ILMN_1757546	0002480255	S	882	GGACATGCATGGGGCTCTGGGAAGACTCCTAGATAAACACTTTAAGAGGC	17	-	2995359-2995408	17p13.3b	Homo sapiens olfactory receptor, family 1, subfamily D, member 2 (OR1D2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8097991] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 1370859] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8097991] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 8097991] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 8004088] [evidence TAS]	MGC119943; OR17-4; MGC119942; OLFR1	MGC119943; OR17-4; MGC119942; OLFR1
Homo sapiens	RefSeq	XM_001718070.1	ILMN_353089	LOC100134291	XM_001718070.1	XM_001718070.1		100134291	169169691	XM_001718070.1	LOC100134291	XP_001718122.1	ILMN_3249560	0001660209	S	337	GGAATTCTGAAGTTCTGGGCCTTTCTCAGAAGACTGTAATGTACCTGAAG					PREDICTED: Homo sapiens similar to mitogen-activated protein kinase phosphatase x (LOC100134291), mRNA.					
Homo sapiens	RefSeq	NM_006446.2	ILMN_162063	SLCO1B1	NM_006446.3	NM_006446.3		10599	141801825	NM_006446.3	SLCO1B1	NP_006437.2	ILMN_1771118	0005270129	S	2133	GTCCCTTCTGCTGGGGCAGATAGTGAAACACATTGTTAAGGGGAGAAAAA	12	+	21283352-21283390:21283391-21283401	12p12.2a-p12.1e	Homo sapiens solute carrier organic anion transporter family, member 1B1 (SLCO1B1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10358072] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10358072] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [pmid 10358072] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other, in a sodium independent manner [goid 15347] [pmid 10358072] [evidence TAS]	LST-1; OATP2; OATP1B1; SLC21A6; MGC133282; OATP-C	LST-1; OATP2; OATP1B1; SLC21A6; OATP-C
Homo sapiens	RefSeq	NM_020708.3	ILMN_165817	SLC12A5	NM_020708.3	NM_020708.3		57468	38570143	NM_020708.3	SLC12A5	NP_065759.1	ILMN_1811835	0000270301	S	5438	GGGGGCTGTATCAACATCAATTAGGGAACCAAAGTTGCACTATCTGGGCC	20	+	44121592-44121641	20q13.12b	Homo sapiens solute carrier family 12, (potassium-chloride transporter) member 5 (SLC12A5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12106695] [evidence NAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The regulation of the levels, transport, and metabolism of ions within a cell or between a cell and its external environment [goid 6873] [pmid 12106695] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Cl-(out) = K+(in) + Cl-(in) [goid 15379] [pmid 12106695] [evidence NAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KIAA1176; KCC2	KIAA1176; KCC2
Homo sapiens	RefSeq	NM_020708.3	ILMN_165817	SLC12A5	NM_020708.3	NM_020708.3		57468	38570143	NM_020708.3	SLC12A5	NP_065759.1	ILMN_2129910	0002070372	S	5830	AGGCCTGCCTTTAATTTTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCC	20	+	44121984-44122033	20q13.12b	Homo sapiens solute carrier family 12, (potassium-chloride transporter) member 5 (SLC12A5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12106695] [evidence NAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The regulation of the levels, transport, and metabolism of ions within a cell or between a cell and its external environment [goid 6873] [pmid 12106695] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Cl-(out) = K+(in) + Cl-(in) [goid 15379] [pmid 12106695] [evidence NAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KIAA1176; KCC2	KIAA1176; KCC2
Homo sapiens	RefSeq	NM_000360.2	ILMN_32496	TH	NM_199293.2	NM_199293.2		7054	88900504	NM_199293.2	TH	NP_954987.2	ILMN_1677273	0001990068	A	1744	AACAGCTGTGTGTGCCCGTGGTGAGGTTGTGCTGCCTGTGGTGAGGTCCT	11	-	2185263-2185312	11p15.5a	Homo sapiens tyrosine hydroxylase (TH), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10907721] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IEA]	The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 7715703] [evidence TAS]; The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 42423] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dopamine (3,4-dihydroxyphenylethylamine) from L-tyrosine, via the metabolic precursor 3,4-dihydroxy-L-phenylalanine (L-dopa). Dopamine is a catecholamine neurotransmitter and a metabolic precursor of norepinephrine and epinephrine [goid 6585] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: L-tyrosine + tetrahydrobiopterin + O2 = 3,4-dihydroxy-L-phenylalanine + 4-alpha-hydroxytetrahydrobiopterin + H2O [goid 4511] [pmid 16338639] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: L-tyrosine + tetrahydrobiopterin + O2 = 3,4-dihydroxy-L-phenylalanine + 4-alpha-hydroxytetrahydrobiopterin + H2O [goid 4511] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]	TYH	TYH
Homo sapiens	RefSeq	NM_001004707.2	ILMN_16754	OR4D2	NM_001004707.2	NM_001004707.2		124538	54262151	NM_001004707.2	OR4D2	NP_001004707.1	ILMN_1807883	0006220064	S	1593	GCCCTGACCCATCATTGACCAAACTGATGACTTCGAGTAAGCCACCCAGC	17	+	53603353-53603402	17q22d	Homo sapiens olfactory receptor, family 4, subfamily D, member 2 (OR4D2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR17-24; BC2009	OR17-24; BC2009
Homo sapiens	RefSeq	NM_001017975.1	ILMN_20077	HFM1	NM_001017975.1	NM_001017975.1		164045	63025209	NM_001017975.1	HFM1	NP_001017975.1	ILMN_1747285	0006370131	S	1880	GGACTCCGTCCTTGAGGAGGATCTCATGGTTAATGGGGTACATGGACATG	1	-	91615678-91615727	1p22.2a	Homo sapiens HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) (HFM1), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ39011; MER3	FLJ39011; MER3
Homo sapiens	RefSeq	NM_001029875.1	ILMN_183460	RGS7BP	NM_001029875.1	NM_001029875.1		401190	71274165	NM_001029875.1	RGS7BP	NP_001025046.1	ILMN_1654632	0003870309	S	3310	TTCACCGTCTCACATTAGACAGGCCAATGCATCCCTTAGGAGCTGCCCCA	5	+	63907283-63907332	5q12.3a	Homo sapiens regulator of G-protein signaling 7 binding protein (RGS7BP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]		R7BP	R7BP
Homo sapiens	Unigene	Hs.14706	ILMN_71392	HS.14706	Hs.14706		Hs.14706		37182142	AY358510			ILMN_1911047	0006660543	S	840	CGCAAAGCAGCAGCCATGTAGAATGAACCGTCCAGAGAGCCAAGCACGGC	17	+	73673713-73673762		Homo sapiens clone DNA57836 GLPG464 (UNQ464) mRNA, complete cds					
Homo sapiens	RefSeq	NM_021912.2	ILMN_138207	GABRB3	NM_021912.2	NM_021912.2		2562	30061561	NM_021912.2	GABRB3	NP_068712.1	ILMN_1673493	0003400435	I	2	TCGGAGAGTAGGGGGGACAGCGGATCCCAGCAGGTTAGGCCGGAGGAACA	15	-	24569969-24570018	15q12b	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 3 (GABRB3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1664410] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1664410] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [pmid 1664410] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC9051	MGC9051
Homo sapiens	RefSeq	NM_144639.1	ILMN_3225	UROC1	NM_144639.1	NM_144639.1		131669	21389466	NM_144639.1	UROC1	NP_653240.1	ILMN_1668533	0004060328	S	2750	TAATGACTGGGTCCAGAGCCTCGTGAGAGGTCACCGGGATGGGGGAAGTG	3	-	127683141-127683190	3q21.2c-q21.3a	Homo sapiens urocanase domain containing 1 (UROC1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15221005] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]	Catalysis of the reaction: 4,5-dihydro-4-oxo-5-imidazolepropanoate = urocanate + H2O [goid 16153] [evidence IEA]; Catalysis of the reaction: 4,5-dihydro-4-oxo-5-imidazolepropanoate = urocanate + H2O [goid 16153] [pmid 15221005] [evidence EXP]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: 4,5-dihydro-4-oxo-5-imidazolepropanoate = urocanate + H2O [goid 16153] [evidence IEA]	MGC135007; FLJ31300; MGC135008; HMFN0320	MGC135007; FLJ31300; MGC135008; HMFN0320
Homo sapiens	RefSeq	XM_928853.1	ILMN_45920	LOC645879	XM_928853.2	XM_928853.2		645879	113419965	XM_928853.2	LOC645879	XP_933946.1	ILMN_1657010	0004730600	S	458	ACACAAGCAGTAAGAGGCCGCGCTTGGACCCTATCCTCGCTGATCGCTCA	8	-	7923455-7923504	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC645879 (LOC645879), mRNA.					
Homo sapiens	Unigene	Hs.560457	ILMN_114257	HS.560457	Hs.560457		Hs.560457		6990854	AW450078			ILMN_1889942	0006590431	S	153	GGGATACAGCGCACAATTGCAAATCAGGATACAGGGGTCTGGCAAAGGAC	16	-	4175117-4175166		UI-H-BI3-akw-b-06-0-UI.s1 NCI_CGAP_Sub5 Homo sapiens cDNA clone IMAGE:2735578 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001001693.1	ILMN_15238	FLJ46257	NM_001001693.1	NM_001001693.1		400932	48717391	NM_001001693.1	FLJ46257	NP_001001693.1	ILMN_1772848	0000160717	S	4023	GGAAGCCCATTGTCCTGCCAACAGCACAAGACCTCCAGGTGATCCTGATG	22	-	46396922-46396971	22q13.31f	Homo sapiens FLJ46257 protein (FLJ46257), mRNA.					
Homo sapiens	RefSeq	XM_927284.1	ILMN_34611	DKFZP781G0119	XM_927284.2	XM_927284.2		644041	113427815	XM_927284.2	DKFZP781G0119	XP_932377.1	ILMN_1664193	0004280035	S	4510	CTTTGTGTAAGTTATTGGTGATTTATATGCAGTATGGACCATCCTCCCCC	18	+	70176783-70176832	18q22.3c	PREDICTED: Homo sapiens hypothetical protein LOC644041 (DKFZP781G0119), mRNA.					
Homo sapiens	RefSeq	NM_001006614.1	ILMN_3272	WBP5	NM_001006614.1	NM_001006614.1		51186	55743146	NM_001006614.1	WBP5	NP_001006615.1	ILMN_2340935	0001660750	A	849	TGGACATAACTTGTGAAGGATGAAAGAAAGTACAGCCTCTCGGTGGTGGG	X	+	102499895-102499944	Xq22.1e-q22.2a	Homo sapiens WW domain binding protein 5 (WBP5), transcript variant 4, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions [goid 50699] [evidence IEA]	DKFZp313K1940; TCEAL9	DKFZp313K1940; TCEAL9
Homo sapiens	RefSeq	NM_198887.1	ILMN_28574	NUP43	NM_198887.1	NM_198887.1		348995	38605732	NM_198887.1	NUP43	NP_942590.1	ILMN_1762674	0000070593	I	3161	GGGTTGCAGGATCTTAGAGATAGAAAGTACCTTGGTGATCATCTCCAGCC	6	-	150087787-150087836	6q25.1a	Homo sapiens nucleoporin 43kDa (NUP43), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 12228227] [evidence EXP]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		p42; FLJ13287; bA350J20.1	p42; FLJ13287; bA350J20.1
Homo sapiens	RefSeq	NM_201526.1	ILMN_22659	ISLR	NM_201526.1	NM_201526.1		3671	41582238	NM_201526.1	ISLR	NP_958934.1	ILMN_1711009	0006110551	I	38	AGCTGGGGTCCTCTTCCATCCCGTCTTCATCCTGCCTGGCTGCGTGACCT	15	+	72253995-72254044	15q24.1b	Homo sapiens immunoglobulin superfamily containing leucine-rich repeat (ISLR), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9325048] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9325048] [evidence TAS]	HsT17563; MGC102816	HsT17563; MGC102816
Homo sapiens	RefSeq	NM_001080481.1	ILMN_180741	USP45	NM_001080481.1	NM_001080481.1		85015	122937411	NM_001080481.1	USP45	NP_001073950.1	ILMN_2380453	0000060274	A	5557	AGGCATGGTGGCTCATGCTGTTGGGAGGCTGAGTGGGGAAGATGCTTGAG	6	-	99987684-99987733	6q16.3a	Homo sapiens ubiquitin specific peptidase 45 (USP45), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	MGC14793	MGC14793
Homo sapiens	RefSeq	NM_018465.1	ILMN_17839	C9ORF46	NM_018465.2	NM_018465.2		55848	142352128	NM_018465.2	C9orf46	NP_060935.1	ILMN_1709043	0006520661	S	435	GCCAGCCTTCCTGGTCCCGATTGTTCCATTAAGCTTTATCCTCACCTACC	9	-	5421982-5421983:5426569-5426616	9p24.1c	Homo sapiens chromosome 9 open reading frame 46 (C9orf46), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ39176; FLJ14688; AD025; MDS030	FLJ39176; FLJ14688; AD025; MDS030
Homo sapiens	RefSeq	NR_030299.1	ILMN_388020	MIR573	NR_030299.1	NR_030299.1		693158	262205838	NR_030299.1	MIR573		ILMN_3310705	0001030408	S	4	GCGGTTTCTCCCTGAAGTGATGTGTAACTGATCAGGATCTACTCATGTCG				4p15.2d	Homo sapiens microRNA 573 (MIR573), microRNA.					
Homo sapiens	RefSeq	NM_172218.1	ILMN_12212	SPAG1	NM_172218.1	NM_172218.1		6674	27262637	NM_172218.1	SPAG1	NP_757367.1	ILMN_1652314	0006280296	I	35	AGAGCCGGTGCGGCGGCCGCGACTTCCCCGACGCGGGGCGCTGAGAAGCA	8	+	101170297-101170346	8q22.2b	Homo sapiens sperm associated antigen 1 (SPAG1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [pmid 1299558] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HSD-3.8; TPIS; FLJ32920; SP75	HSD-3.8; TPIS; FLJ32920; SP75
Homo sapiens	RefSeq	NM_003114.3	ILMN_12212	SPAG1	NM_172218.1	NM_172218.1		6674	27262637	NM_172218.1	SPAG1	NP_757367.1	ILMN_1712773	0006130601	A	2434	AGAAGGGAGGCAAAAGCAGCAGGTCACCAGAAGACCCTGAGAAACTTCCG	8	+	101247224-101247273	8q22.2b	Homo sapiens sperm associated antigen 1 (SPAG1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [pmid 1299558] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HSD-3.8; TPIS; FLJ32920; SP75	HSD-3.8; TPIS; FLJ32920; SP75
Homo sapiens	RefSeq	NM_015955.2	ILMN_21015	MEMO1	NM_015955.2	NM_015955.2		51072	20127543	NM_015955.2	MEMO1	NP_057039.1	ILMN_1741599	0005870736	S	1340	CCTTTACCACGATACTGGTCCTGGTTTGGGGGGATTCTGAAACCTCAAAC	2	-	32093316-32093365	2p22.3e	Homo sapiens mediator of cell motility 1 (MEMO1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]			FLJ25031; CGI-27; MEMO; NS5ATP7; C2orf4; DKFZp434I0135	FLJ25031; CGI-27; MEMO; NS5ATP7; C2orf4; DKFZp434I0135
Homo sapiens	RefSeq	NM_024054.1	ILMN_309009	C7ORF25	NM_001099858.1	NM_001099858.1		79020	153792790	NM_001099858.1	C7orf25	NP_001093328.1	ILMN_1751051	0004010072	S	1383	CAGCCCAGAGCACTTACTGAGAGTAAAGAGGCTCTAGCCACCCCCTTACC	7	-	42949264-42949313	7p14.1a	Homo sapiens chromosome 7 open reading frame 25 (C7orf25), transcript variant 1, mRNA.				MGC2821; FLJ21167	MGC2821; FLJ21167
Homo sapiens	RefSeq	NM_207284.1	ILMN_21956	AAA1	NM_207284.1	NM_207284.1		404744	46402493	NM_207284.1	AAA1	NP_997167.1	ILMN_2375184	0002480367	A	176	AGAAACGCAGGGAGACAGTTCAGTCACTGCAATCTTCATGCCCATCAGTT	7	-	34734892-34734941	7p14.3a	Homo sapiens AAA1 protein (AAA1), transcript variant II, mRNA.					
Homo sapiens	RefSeq	XM_942059.1	ILMN_30879	LOC652557	XM_942059.1	XM_942059.1		652557	89063068	XM_942059.1	LOC652557	XP_947152.1	ILMN_1793009	0007050369	S	539	GTGAGGCTGTCAAGGGAGAGAGAACCCTAAGGCAGGTATCAGCCGTGCAG					PREDICTED: Homo sapiens similar to Tripartite motif protein 26 (Zinc finger protein 173) (Acid finger protein) (AFP) (RING finger protein 95) (LOC652557), mRNA.					
Homo sapiens	RefSeq	NM_002760.2	ILMN_32106	PRKY	NM_002760.3	NM_002760.3		5616	89276754	NM_002760.3	PRKY	NP_002751.1	ILMN_1772163	0001850687	S	6641	ATCTGGCCTTGCCCCCAGCAGTACAGTCCTTCCTAATAACGGGGATGCTC	Y	+	7309013-7309062	Yp11.2g	Homo sapiens protein kinase, Y-linked (PRKY), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9154127] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9154127] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_006779.2	ILMN_3335	CDC42EP2	NM_006779.2	NM_006779.2		10435	30089963	NM_006779.2	CDC42EP2	NP_006770.1	ILMN_1652777	0006180253	S	1771	ACGTCGTACCTGACGCTGAGCCTGTCATGAGAATGCAACAGGAGCAAACC	11	+	64846266-64846315	11q13.1c	Homo sapiens CDC42 effector protein (Rho GTPase binding) 2 (CDC42EP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11035016] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10430899] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [pmid 11035016] [evidence NAS]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 11035016] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [pmid 11035016] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia [goid 31274] [pmid 11035016] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein complex assembly [goid 31334] [pmid 11584266] [evidence TAS]	Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [pmid 10430899] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11584266] [evidence IPI]; Interacting selectively with the GTP-bound form of the Rho protein [goid 17049] [pmid 11035016] [evidence IPI]	CEP2; BORG1	CEP2; BORG1
Homo sapiens	RefSeq	NM_020663.2	ILMN_25515	RHOJ	NM_020663.3	NM_020663.3		57381	142380172	NM_020663.3	RHOJ	NP_065714.1	ILMN_1678215	0003440243	S	1390	CCCCAGCTCATGAACGTGAAGCTGATAGGAAATCACCCCAGGGAACCCGA	14	+	62827797-62827846	14q23.2b	Homo sapiens ras homolog gene family, member J (RHOJ), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10967094] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10967094] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	ARHJ; TCL; RASL7B; FLJ14445; TC10B; MGC34777	ARHJ; TCL; RASL7B; FLJ14445; TC10B; MGC34777
Homo sapiens	RefSeq	XM_927880.1	ILMN_163805	PIK3CA	NM_006218.2	NM_006218.2		5290	54792081	NM_006218.2	PIK3CA	NP_006209.2	ILMN_1705396	0001240520	S	1734	ATGACAAAGAACAGCTCAAAGCAATTTCTACACGAGATCCTCTCTCTGAA	3	+	178936035-178936084	3q26.32c	Homo sapiens phosphoinositide-3-kinase, catalytic, alpha polypeptide (PIK3CA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12660731] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10648629] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12167717] [evidence EXP]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10490823] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [pmid 2174051] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [pmid 10648629] [evidence EXP]	PI3K; MGC142161; p110-alpha; MGC142163	
Homo sapiens	RefSeq	NM_006218.2	ILMN_163805	PIK3CA	NM_006218.2	NM_006218.2		5290	54792081	NM_006218.2	PIK3CA	NP_006209.2	ILMN_1705468	0004880367	S	3423	CTCAGCAGGCAAAGACCGATTGCATAGGAATTGCACAATCCATGAACAGC	3	+	178952211-178952260	3q26.32c	Homo sapiens phosphoinositide-3-kinase, catalytic, alpha polypeptide (PIK3CA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12660731] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10648629] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12167717] [evidence EXP]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10490823] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [pmid 2174051] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [pmid 10648629] [evidence EXP]	PI3K; MGC142161; p110-alpha; MGC142163	PI3K; MGC142161; p110-alpha; MGC142163
Homo sapiens	RefSeq	NM_005275.2	ILMN_3133	GNL1	NM_005275.2	NM_005275.2		2794	38788318	NM_005275.2	GNL1	NP_005266.2	ILMN_1789457	0006370068	S	2843	TGAGTGCTGAGTTCCTCGCCCAGCGCCATCTTCCCTCCCAGTATCTTTGC	6	-	30621787-30621827:30621828-30621836	6p21.33b	Homo sapiens guanine nucleotide binding protein-like 1 (GNL1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8180467] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process involved in the carrying out of an immune response by a T cell [goid 2456] [pmid 8180467] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 17525332] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8180467] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 8180467] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 8180467] [evidence NAS]	HSR1	HSR1
Homo sapiens	RefSeq	NM_015936.1	ILMN_164535	YARS2	NM_001040436.1	NM_001040436.1		51067	94681056	NM_001040436.1	YARS2	NP_001035526.1	ILMN_1782635	0004570333	S	1324	CCAGATGGTCCCCGAGGGTATCGAATGATAACAGAAGGCGGAGTCAGCAT	12	-	32900264-32900297:32902871-32902886	12p11.21a	Homo sapiens tyrosyl-tRNA synthetase 2, mitochondrial (YARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10810093] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of coupling tyrosine to tyrosyl-tRNA, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6437] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) [goid 4831] [pmid 10810093] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ13995; CGI-04; mt-TyrRS; TYRRS	FLJ13995; CGI-04
Homo sapiens	RefSeq	XM_927712.1	ILMN_36896	LOC440104	XM_927712.2	XM_927712.2		440104	113423357	XM_927712.2	LOC440104	XP_932805.2	ILMN_1652687	0000460309	S	2325	GACCACAGCTCATGACAACTTTGATTTCCCCGGCCCAAGCGAGCCTCTCA	12	+	54515388-54515437	12q13.2c	PREDICTED: Homo sapiens similar to RIKEN cDNA 1110012D08 (LOC440104), mRNA.					
Homo sapiens	RefSeq	NM_145012.3	ILMN_18665	CCNY	NM_145012.3	NM_145012.3		219771	32171246	NM_145012.3	CCNY	NP_659449.3	ILMN_2261784	0005310605	I	1952	GGCATGTGCCTGGAACTACCGAGTAGGAGCCATTTCTTTGTACCCCTGCC	10	+	35899004-35899053	10p11.21c	Homo sapiens cyclin Y (CCNY), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]			CBCP1; CFP1; C10orf9	CBCP1; CFP1; C10orf9
Homo sapiens	RefSeq	NM_181698.1	ILMN_18665	CCNY	NM_145012.3	NM_145012.3		219771	32171246	NM_145012.3	CCNY	NP_659449.3	ILMN_1708991	0001340291	A	1328	AGGGAAAGGGAAGTCGTGGAGAGGCAGGGAAAATGGTTAAGCAGCCCGGC	10	+	35898380-35898429	10p11.21c	Homo sapiens cyclin Y (CCNY), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]			CBCP1; CFP1; C10orf9	CBCP1; CFP1; C10orf9
Homo sapiens	RefSeq	XR_040541.1	ILMN_335948	C10ORF50	XR_040541.1	XR_040541.1		645528	169201952	XR_040541.1	C10orf50		ILMN_3254163	0001260097	M	393	CCTATGCCCCACCCCCACAAGAGGCACGAAGCATCAATGTTCAGATGCCG				10p12.1b	PREDICTED: Homo sapiens misc_RNA (C10orf50), miscRNA.					
Homo sapiens	RefSeq	NM_005859.3	ILMN_1281	PURA	NM_005859.3	NM_005859.3		5813	62530389	NM_005859.3	PURA	NP_005850.1	ILMN_1709142	0000160608	S	2415	GGTGTAGGGTATGAAAATGCAAAGTTTAGGAGAGCACTTTACCAAGCTGG	5	+	139476306-139476355	5q31.3a	Homo sapiens purine-rich element binding protein A (PURA), mRNA.	The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [pmid 15777841] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9716182] [evidence IDA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [pmid 15777841] [evidence IDA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [pmid 1545807] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	Interacting selectively with double-stranded telomere-associated DNA [goid 3691] [pmid 15777841] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 9334258] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IEA]	PURALPHA; PUR-ALPHA; PUR1	PURALPHA; PUR-ALPHA; PUR1
Homo sapiens	RefSeq	NM_001005479.1	ILMN_13112	OR5H6	NM_001005479.1	NM_001005479.1		79295	53828731	NM_001005479.1	OR5H6	NP_001005479.1	ILMN_1766438	0006350215	S	806	GCCCCCTCACCTTCAAATATCTGGGCTCTGCATCTCCGCAAGCAGATGAC	3	+	97983934-97983983	3q11.2c	Homo sapiens olfactory receptor, family 5, subfamily H, member 6 (OR5H6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR3-11	OR3-11
Homo sapiens	RefSeq	NM_001011551.1	ILMN_14223	C1GALT1C1	NM_001011551.1	NM_001011551.1		29071	58532583	NM_001011551.1	C1GALT1C1	NP_001011551.1	ILMN_2401730	0005390288	A	1585	AGCCTCCCCAAGTTCCAATGGATTTGCCTTCTCAAAATGTACAACTAAGC	X	-	119759562-119759611	Xq24d	Homo sapiens C1GALT1-specific chaperone 1 (C1GALT1C1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC19947; C1GALT2; HSPC067; C1Gal-T2; COSMC; c38h2-l1	C1Gal-T2; COSMC; c38h2-l1; MGC19947; C1GALT2; HSPC067
Homo sapiens	RefSeq	NM_144660.1	ILMN_6307	SAMD8	NM_144660.1	NM_144660.1		142891	21389544	NM_144660.1	SAMD8	NP_653261.1	ILMN_2105177	0001010181	S	1352	CTCTGGCCAATACCAGAGCATATCAGCAGAGTAGGAGAGCAAGGATTTGG	10	+	76606302-76606351	10q22.2c	Homo sapiens sterile alpha motif domain containing 8 (SAMD8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 14685263] [evidence NAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6686] [pmid 14685263] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SMSr; FLJ25082	SMSr; FLJ25082
Homo sapiens	RefSeq	XM_934673.1	ILMN_31728	LOC644838	XM_934673.1	XM_934673.1		644838	88953097	XM_934673.1	LOC644838	XP_939766.1	ILMN_1775053	0004040600	I	1941	CTCCTAATTATGTGTCCTTGTTCTTCTGTTTAAAGTAACATTTTGTGTCT	2	-	67204096-67204145	2p14b	PREDICTED: Homo sapiens hypothetical protein LOC644837, transcript variant 1 (LOC644838), mRNA.					
Homo sapiens	RefSeq	XM_934673.1	ILMN_31728	LOC644838	XM_934673.1	XM_934673.1		644838	88953097	XM_934673.1	LOC644838	XP_939766.1	ILMN_1692871	0000270669	A	1	TCTAAAAAGAGCCTCTCACCTGAGGCCTTCACCTGAGAGCTGGAGCCTGT	2	-	67295899-67295948	2p14b	PREDICTED: Homo sapiens hypothetical protein LOC644837, transcript variant 1 (LOC644838), mRNA.					
Homo sapiens	RefSeq	XM_929377.1	ILMN_45868	LOC646449	XM_929377.1	XM_929377.1		646449	89045002	XM_929377.1	LOC646449	XP_934470.1	ILMN_1666212	0007210608	S	383	CCAGTGGCCCTGAACAGCCCTCAGTGCCCACGTCTCTGCCACTTATTGCT	18	-	14621918-14621967	18p11.21b	PREDICTED: Homo sapiens similar to Sorting nexin-19 (LOC646449), mRNA.					
Homo sapiens	RefSeq	NM_001037290.1	ILMN_14920	BCO2	NM_001037290.1	NM_001037290.1		83875	82617627	NM_001037290.1	BCO2	NP_001032367.1	ILMN_2335264	0002810075	A	2136	GTCACGCCATGGCAGAGGCTCGAGTGCATACAAGCTTCGGTTTTACCCTT	11	+	111594198-111594247	11q23.1c	Homo sapiens beta-carotene oxygenase 2 (BCO2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11278918] [evidence IC ]	The chemical reactions and pathways involving carotenes, hydrocarbon carotenoids [goid 16119] [evidence IEA]; The chemical reactions and pathways involving carotenes, hydrocarbon carotenoids [goid 16119] [pmid 11278918] [evidence IDA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [pmid 11278918] [evidence NAS]; The chemical reactions and pathways involving retinal, a compound that plays an important role in the visual process in most vertebrates. In the retina, retinal combines with opsins to form visual pigments. Retinal is one of the forms of vitamin A [goid 42574] [pmid 11278918] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [pmid 11278918] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]	B-DIOX-II; FLJ34464; BCO2	B-DIOX-II; FLJ34464; BCO2
Homo sapiens	RefSeq	NM_001008917.1	ILMN_11584	LOC150383	NM_001008917.1	NM_001008917.1		150383	57232755	NM_001008917.1	LOC150383	NP_001008917.1	ILMN_1787288	0006130768	I	331	TCCTGTGCTTGGGACCTGTTTTACTGCTGAGGCTTCATTCAGTCCTGCCC	22	-	45021242-45021291	22q13.31d	Homo sapiens similar to RIKEN cDNA 2210021J22 (LOC150383), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	XM_932931.1	ILMN_40325	LOC645485	XM_932931.2	XM_932931.2		645485	113423297	XM_932931.2	LOC645485	XP_938024.2	ILMN_1692833	0002120672	S	2018	ATCTCTTTTAGTCTTTTTAATCTGTAGTACTACCTCTGTTATTACATCTG	12	+	30824818-30824867	12p11.21b	PREDICTED: Homo sapiens hypothetical LOC645485 (LOC645485), mRNA.					
Homo sapiens	RefSeq	XM_939169.1	ILMN_162972	LOC648210	XR_018923.1	XR_018923.1		648210	113417129	XR_018923.1	LOC648210		ILMN_1715947	0006510246	A	615	CAGCAAGAGATGGATAGTGCTTCATCCAGCCAAAGAGGTCGAAGTGGTTC					PREDICTED: Homo sapiens similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) (LOC648210), mRNA.					
Homo sapiens	RefSeq	XM_936790.1	ILMN_162972	LOC648210	XR_018923.1	XR_018923.1		648210	113417129	XR_018923.1	LOC648210		ILMN_1661346	0004760243	S	1395	AAGCCATCTTGGTAAATTTCCCCAACAGTGTGAAGTTAGAATTCCTTCAG					PREDICTED: Homo sapiens similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) (LOC648210), mRNA.					
Homo sapiens	RefSeq	XM_933604.1	ILMN_162972	LOC648210	XR_018923.1	XR_018923.1		648210	113417129	XR_018923.1	LOC648210		ILMN_1732074	0006900048	A	32	AGAAGCATTGTTAAAGTCTCTCTTCACCCTGCCGTCATGTCTAAGTCAGA					PREDICTED: Homo sapiens similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) (LOC648210), mRNA.					
Homo sapiens	RefSeq	NM_080656.1	ILMN_23130	CDKN2AIPNL	NM_080656.1	NM_080656.1		91368	18087820	NM_080656.1	CDKN2AIPNL	NP_542387.1	ILMN_2130078	0007400224	S	923	CTTATGCCCATAATAATCCCAGCACTTTGGGAGGCCGAGGTGAGCAGATC	5	-	133765927-133765976	5q31.1e	Homo sapiens CDKN2A interacting protein N-terminal like (CDKN2AIPNL), mRNA.				MGC13017	MGC13017
Homo sapiens	RefSeq	NM_080656.1	ILMN_23130	CDKN2AIPNL	NM_080656.1	NM_080656.1		91368	18087820	NM_080656.1	CDKN2AIPNL	NP_542387.1	ILMN_1806405	0001430167	S	694	GACAAGGTCTCACTCTGTCGCCCAGGCAGAAGCACAAAGGTGCAGTATTG	5	-	133766156-133766205	5q31.1e	Homo sapiens CDKN2A interacting protein N-terminal like (CDKN2AIPNL), mRNA.				MGC13017	MGC13017
Homo sapiens	RefSeq	NM_030941.1	ILMN_17520	LOC81691	NM_030941.1	NM_030941.1		81691	13569912	NM_030941.1	LOC81691	NP_112203.1	ILMN_1796923	0003060703	S	2518	CGTGAGTCGGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGG	16	+	20768299-20768303:20768304-20768348	16p12.2c	Homo sapiens exonuclease NEF-sp (LOC81691), mRNA.				DKFZp434J0315	DKFZp434J0315
Homo sapiens	RefSeq	NM_138378.1	ILMN_307249	FDXACB1	NM_138378.1	NM_138378.1		91893	149274609	NM_138378.1	FDXACB1	NP_612387.1	ILMN_3243529	0001110553	S	2610	GCCACCGCGCCCGGCCTACTGTTAGTTGATCTTAAAGATACCTTGACTCT	11	-	111745158-111745207	11q23.1b	Homo sapiens ferredoxin-fold anticodon binding domain containing 1 (FDXACB1), mRNA.					
Homo sapiens	RefSeq	NR_024250.1	ILMN_370945	LOC100125556	NR_024250.1	NR_024250.1		100125556	209954671	NR_024250.1	LOC100125556		ILMN_3185784	0003370669	A	1075	GGTCACAGGGAAGTCACAGAACAGTAATACGCTAGCAGGGGCATGGGGCA	3	+	125647999-125648048	3q21.2c	Homo sapiens family with sequence similarity 86, member A pseudogene (LOC100125556), transcript variant 2, non-coding RNA.					
Homo sapiens	RefSeq	NR_024250.1	ILMN_370945	LOC100125556	NR_024250.1	NR_024250.1		100125556	209954671	NR_024250.1	LOC100125556		ILMN_3262250	0001820452	M	1175	CAGAGCCAAGCACAGCTTCCCGGGTCACAGAACCAATTCATTCACCAGGC	3	+	125648099-125648148	3q21.2c	Homo sapiens family with sequence similarity 86, member A pseudogene (LOC100125556), transcript variant 2, non-coding RNA.					
Homo sapiens	RefSeq	XM_001719902.1	ILMN_333847	LOC651861	XM_001719902.1	XM_001719902.1		651861	169217649	XM_001719902.1	LOC651861	XP_001719954.1	ILMN_3197759	0001470440	A	74	AGAGGTCATGCCACCTGAGGCAGCACCGGCGGGAATCTCAGCTCTGGCCA					PREDICTED: Homo sapiens similar to double homeobox, 4 (LOC651861), mRNA.					
Homo sapiens	RefSeq	NR_030297.1	ILMN_388018	MIR571	NR_030297.1	NR_030297.1		693156	262205828	NR_030297.1	MIR571		ILMN_3310108	0001780370	S	25	CCATTTCCTTGTCTGTAGCCATGTCTATGGGCTCTTGAGTTGGCCATCTG				4p16.3d	Homo sapiens microRNA 571 (MIR571), microRNA.					
Homo sapiens	RefSeq	XR_039521.1	ILMN_340985	LOC646936	XR_039521.1	XR_039521.1		646936	169163935	XR_039521.1	LOC646936		ILMN_3206429	0005490259	A	1181	CACTCCCTGCAGCCACGGAAGGGATCATCCTTGGAGGCATCCCAGTGATT				2p16.3c	PREDICTED: Homo sapiens misc_RNA (LOC646936), miscRNA.					
Homo sapiens	RefSeq	XR_039521.1	ILMN_340985	LOC646936	XR_039521.1	XR_039521.1		646936	169163935	XR_039521.1	LOC646936		ILMN_3282938	0004560603	M	993	GAGGCAGCTGCCACCGAGATCTGTTGAGCCACCACAGGTTACATTCAGAA				2p16.3c	PREDICTED: Homo sapiens misc_RNA (LOC646936), miscRNA.					
Homo sapiens	RefSeq	NM_139131.2	ILMN_21954	NUP98	NM_016320.3	NM_016320.3		4928	56550110	NM_016320.3	NUP98	NP_057404.2	ILMN_1732776	0003440528	A	2971	CCTGCAAGCCAGACTACGCCCTTGCAGATGGCTCTTAATGGCAAACCTGC	11	-	3749629-3749678	11p15.4d	Homo sapiens nucleoporin 98kDa (NUP98), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 9348540] [evidence IDA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 10087256] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7736573] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [pmid 15229283] [evidence NAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9348540] [evidence IMP]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [pmid 9348540] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear pore [goid 6999] [pmid 9348540] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 7736573] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9348540] [evidence IPI]; The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [pmid 9348540] [evidence NAS]	NUP196; ADIR2	NUP196; NUP96; ADIR2
Homo sapiens	RefSeq	NM_016320.3	ILMN_21954	NUP98	NM_016320.3	NM_016320.3		4928	56550110	NM_016320.3	NUP98	NP_057404.2	ILMN_1684074	0004480767	I	4903	CAGCTTGAAAGTGAGGGGCTCTGGGAGTGGGCCATCTTTGTCCTCCTGCA	11	-	3724101-3724122:3726430-3726457	11p15.4d	Homo sapiens nucleoporin 98kDa (NUP98), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 9348540] [evidence IDA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 10087256] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7736573] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [pmid 15229283] [evidence NAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9348540] [evidence IMP]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [pmid 9348540] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear pore [goid 6999] [pmid 9348540] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 7736573] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9348540] [evidence IPI]; The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [pmid 9348540] [evidence NAS]	NUP196; ADIR2	NUP196; ADIR2
Homo sapiens	RefSeq	NM_022835.1	ILMN_177174	PLEKHG2	NM_022835.1	NM_022835.1		64857	45237196	NM_022835.1	PLEKHG2	NP_073746.1	ILMN_1657836	0001690170	S	4401	ACCACCCTGCTCTCTTGGCCTCCACACAGGAATCTATGGGCCTTCACAGG	19	+	44607689-44607738	19q13.2a	Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 2 (PLEKHG2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	CLG; FLJ22458; FLJ00018	CLG; FLJ00018; FLJ22458
Homo sapiens	RefSeq	NM_001964.2	ILMN_20932	EGR1	NM_001964.2	NM_001964.2		1958	31317226	NM_001964.2	EGR1	NP_001955.1	ILMN_1762899	0000870338	S	2664	CGTCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGC	5	+	137804532-137804581	5q31.2c	Homo sapiens early growth response 1 (EGR1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14744935] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 12560508] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12560508] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	G0S30; AT225; TIS8; ZNF225; NGFI-A; KROX-24; ZIF-268	G0S30; AT225; TIS8; ZNF225; NGFI-A; KROX-24; ZIF-268
Homo sapiens	RefSeq	NM_032865.3	ILMN_27455	TNS4	NM_032865.4	NM_032865.4		84951	141802567	NM_032865.4	TNS4	NP_116254.3	ILMN_1716370	0004150358	S	3739	AAGTGCCTGCCCCCTCCCAGCAGCCAGCCCTGCCAAAGTTGCATTATCTT				17q21.2a	Homo sapiens tensin 4 (TNS4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 17190795] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 17190795] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17190795] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CTEN; FLJ14950; PP14434	CTEN; FLJ14950; PP14434
Homo sapiens	RefSeq	XM_001719395.1	ILMN_345021	LOC100130757	XM_001719395.1	XM_001719395.1		100130757	169194821	XM_001719395.1	LOC100130757	XP_001719447.1	ILMN_3188054	0006520672	A	251	TCTTCCCTCGCCCTGCAAATTAGGTGGGTGTGGCAAGGGCACCGCCTGGT				10q11.23a	PREDICTED: Homo sapiens similar to hCG1996658 (LOC100130757), mRNA.					
Homo sapiens	RefSeq	NM_004607.1	ILMN_8008	TBCA	NM_004607.2	NM_004607.2		6902	94421476	NM_004607.2	TBCA	NP_004598.1	ILMN_1726239	0005960093	S	287	GATGATGATCCCAGATTGCCAGCGCAGGTTGGAAGCCGCATATTTGGATC	5	-	77039906-77039928:77072029-77072055	5q14.1a	Homo sapiens tubulin folding cofactor A (TBCA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The aggregation and bonding together of alpha- and beta-tubulin to form a tubulin heterodimer [goid 7021] [evidence IEA]; Completion of folding of alpha- and beta-tubulin; takes place subsequent to chaperonin-mediated partial folding; mediated by a complex of folding cofactors [goid 7023] [pmid 8706133] [evidence TAS]; Folding of the microtubule constituent protein beta-tubulin [goid 7025] [pmid 8706133] [evidence TAS]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 8706133] [evidence TAS]		
Homo sapiens	RefSeq	NM_006369.4	ILMN_25732	LRRC41	NM_006369.4	NM_006369.4		10489	74316011	NM_006369.4	LRRC41	NP_006360.3	ILMN_1712755	0006590088	S	2800	AGCAGGCACCCAGGCTTTAGAGAAGTATAGGGGGCTTCTTCCCTGCTGGG	1	-	46744170-46744219	1p33d	Homo sapiens leucine rich repeat containing 41 (LRRC41), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PP7759; MGC126571; MGC126573; MUF1; RP4-636H5.2	PP7759; MGC126573; MUF1; RP4-636H5.2; MGC126571
Homo sapiens	RefSeq	NM_194303.1	ILMN_23829	C10ORF39	NM_194303.1	NM_194303.1		282973	34916035	NM_194303.1	C10orf39	NP_919279.1	ILMN_1753490	0005960364	S	4800	CCCAGGCACTCCCTTCATAGTCACCCTCTAACCACATGACATTCCGTTCC	10	+	133848096-133848145	10q26.3e	Homo sapiens chromosome 10 open reading frame 39 (C10orf39), mRNA.				FLJ37857	FLJ37857
Homo sapiens	RefSeq	NM_006234.4	ILMN_4217	POLR2J	NM_006234.4	NM_006234.4		5439	62422568	NM_006234.4	POLR2J	NP_006225.1	ILMN_1657317	0006350333	S	627	TGTGGACTTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTCAGGCTTG	7	-	102113847-102113896	7q22.1e	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa (POLR2J), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9409616] [evidence EXP]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 8797801] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 8797801] [evidence TAS]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11; MGC71910; hRPB14; RPB11m; RPB11A; POLR2J1	RPB11; MGC71910; hRPB14; RPB11m; RPB11A; POLR2J1
Homo sapiens	RefSeq	NM_153032.1	ILMN_1484	FLJ32065	NM_153032.1	NM_153032.1		201283	23308548	NM_153032.1	FLJ32065	NP_694577.1	ILMN_1756918	0005820286	S	2628	CCCCATTGCTACAGGGGTGGACAGGTGGAAAAGCTCAGACTTGACAAACC	17	-	60393877-60393926	17q24.1a	Homo sapiens hypothetical protein FLJ32065 (FLJ32065), mRNA.				MGC90301	MGC90301
Homo sapiens	RefSeq	NM_024067.2	ILMN_9701	C7ORF26	NM_024067.2	NM_024067.2		79034	21362069	NM_024067.2	C7orf26	NP_076972.2	ILMN_1730048	0003780148	S	1672	CGGGTGCAAGCCCGTGTGTCTGGCCTCTTTCCTCGTGAAGACGATGTGTC	7	+	6614639-6614688	7p22.1a	Homo sapiens chromosome 7 open reading frame 26 (C7orf26), mRNA.				MGC2718	MGC2718
Homo sapiens	RefSeq	NM_024663.3	ILMN_175218	NPEPL1	NM_024663.3	NM_024663.3		79716	63003926	NM_024663.3	NPEPL1	NP_078939.3	ILMN_1724194	0004670021	S	2057	CAGCCCAGCCCTGTGAAAGATGGAGCTGACTTGCTGCAGGGGACCTGATT	20	+	56724178-56724227	20q13.32a	Homo sapiens aminopeptidase-like 1 (NPEPL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ42065; FLJ11583; bA261P9.2	FLJ11583; bA261P9.2; FLJ42065
Homo sapiens	RefSeq	XM_929070.1	ILMN_37097	LOC646109	XM_929070.1	XM_929070.1		646109	89033908	XM_929070.1	LOC646109	XP_934163.1	ILMN_1669659	0006760040	S	274	CTCTGCGAGCTGGAGATCCGGATTAAGGAGCTGGAGTTGCTCACCATCAC	11	-	33678392-33678441		PREDICTED: Homo sapiens hypothetical protein LOC646109 (LOC646109), mRNA.					
Homo sapiens	RefSeq	NM_016559.1	ILMN_1923	PEX5L	NM_016559.1	NM_016559.1		51555	7706670	NM_016559.1	PEX5L	NP_057643.1	ILMN_1722037	0004560068	S	2977	CTTGCTTAAGTGTCATACTTTACTGGCTTTGCCCTGCACACCAATATTCC	3	-	181001294-181001343	3q26.33a	Homo sapiens peroxisomal biogenesis factor 5-like (PEX5L), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PXR2; PXR2B; PEX5R	PXR2; PXR2B; PEX5R
Homo sapiens	RefSeq	NM_016559.1	ILMN_1923	PEX5L	NM_016559.1	NM_016559.1		51555	7706670	NM_016559.1	PEX5L	NP_057643.1	ILMN_2183891	0000010672	S	3284	GAATTCCACTTAGTTCTCCACAGTGTTTTGTATGTGTTTGGGGCTTGGTG	3	-	181000987-181001036	3q26.33a	Homo sapiens peroxisomal biogenesis factor 5-like (PEX5L), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PXR2; PXR2B; PEX5R	PXR2; PXR2B; PEX5R
Homo sapiens	Unigene	Hs.569948	ILMN_122129	HS.569948	Hs.569948		Hs.569948		22665185	BU151653			ILMN_1821887	0004010692	S	539	GCCAAGGAGGCAAACCTAGGGTGATGTCATTGTTCGAAGCTGTCACCGCC	19	+	43849719-43849768		AGENCOURT_8585572 NIH_MGC_113 Homo sapiens cDNA clone IMAGE:6302814 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001720237.1	ILMN_339135	LOC100130938	XM_001720237.1	XM_001720237.1		100130938	169213177	XM_001720237.1	LOC100130938	XP_001720289.1	ILMN_3257856	0006290037	M	426	CTTTGGGAGCGGGCTTGGGAAGCTGAAGAAATTGAATCAGGACCTCAGGC				18q21.33a	PREDICTED: Homo sapiens hypothetical LOC100130938 (LOC100130938), mRNA.					
Homo sapiens	RefSeq	NM_001101404.1	ILMN_338836	SH2D7	NM_001101404.1	NM_001101404.1		646892	157820784	NM_001101404.1	SH2D7	NP_001094874.1	ILMN_3245175	0006510722	S	1693	CTGCCTCCCACTACTGAGCACTTACCGAATGTGTGGCAGGCTGTGTGCTA	15	+	76183249-76183298	15q25.1a	Homo sapiens SH2 domain containing 7 (SH2D7), mRNA.					
Homo sapiens	RefSeq	NM_152744.3	ILMN_6905	SDK1	NM_152744.3	NM_152744.3		221935	119220551	NM_152744.3	SDK1	NP_689957.3	ILMN_2405353	0006550619	A	6551	CCCAAGCACTCCTTCGTGAACCACTACATGAGCGACCCCACCTACTACAA	7	+	4107507-4107556	7p22.2b-p22.2a	Homo sapiens sidekick homolog 1, cell adhesion molecule (chicken) (SDK1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ31425	FLJ31425
Homo sapiens	RefSeq	NM_018234.2	ILMN_28415	STEAP3	NM_018234.2	NM_018234.2		55240	59853424	NM_018234.2	STEAP3	NP_060704.2	ILMN_2281089	0001470097	I	96	CCTGCTTCAGCCTCCGGAGTAGCTGGGATTACAGGCACGTGCCAACACAC	2	+	119713423-119713472	2q14.2b	Homo sapiens STEAP family member 3 (STEAP3), transcript variant 2, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	STMP3; dudlin-2; TSAP6	STMP3; dudlin-2; TSAP6
Homo sapiens	RefSeq	NM_018234.2	ILMN_28415	STEAP3	NM_018234.2	NM_018234.2		55240	59853424	NM_018234.2	STEAP3	NP_060704.2	ILMN_2383349	0001300762	A	3720	CTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAATTCC	2	+	119739480-119739529	2q14.2b	Homo sapiens STEAP family member 3 (STEAP3), transcript variant 2, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	STMP3; dudlin-2; TSAP6	STMP3; dudlin-2; TSAP6
Homo sapiens	RefSeq	Hs.581212	ILMN_167402	LOC730049	XM_001131881.1	XM_001131881.1		730049	113415322	XM_001131881.1	LOC730049	XP_001131881.1	ILMN_1866040	0001470136	S	336	CCCCTCTCTGTGGCAAGTGATGCTTCATTAAAGTGGCTAAGAACAAGGGC				3q25.1c	PREDICTED: Homo sapiens hypothetical LOC730049 (LOC730049), mRNA.					
Homo sapiens	RefSeq	NM_024042.2	ILMN_25836	METRN	NM_024042.2	NM_024042.2		79006	34147349	NM_024042.2	METRN	NP_076947.1	ILMN_1712583	0003120544	S	640	AGCGACGCTGAGCTGCTCCTGGCCGCATGCACCAGCGACTTCGTAATTCA	16	+	706951-706993:707072-707078	16p13.3f	Homo sapiens meteorin, glial cell differentiation regulator (METRN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IEA]		c380A1.2; MGC2601; C16orf23	MGC2601; C16orf23; c380A1.2
Homo sapiens	RefSeq	NM_001005303.1	ILMN_27875	FLJ46347	NM_001005303.1	NM_001005303.1		389064	52627194	NM_001005303.1	FLJ46347	NP_001005303.1	ILMN_2107344	0000940044	S	2923	CCCCCCACACACAAACCACCCCGAGATGTTGCAAGTTAGGGCTGACAGTC	2	-	174907568-174907617	2q31.1f	Homo sapiens hypothetical LOC389064 (FLJ46347), mRNA.					
Homo sapiens	RefSeq	NM_078628.1	ILMN_29247	MSL3	NM_078628.1	NM_078628.1		10943	17975754	NM_078628.1	MSL3	NP_523352.1	ILMN_3232573	0003120561	I	3150	GCAGTCGAGCCTGGGCGACACAAAGAGACCACCCTGTCTGATAGATAACT	X	+	11695643-11695692	Xp22.2	Homo sapiens male-specific lethal 3 homolog (Drosophila) (MSL3), transcript variant 4, mRNA.				DKFZP586J1822	DKFZP586J1822
Homo sapiens	RefSeq	NM_078628.1	ILMN_29247	MSL3	NM_078628.1	NM_078628.1		10943	17975754	NM_078628.1	MSL3	NP_523352.1	ILMN_1670723	0004590446	I	3290	CCCCACATCGACTAGCAGTTACTCATTTGCTTCTCCCTATGTCCCCTGAC	X	+	11695783-11695832	Xp22.2	Homo sapiens male-specific lethal 3 homolog (Drosophila) (MSL3), transcript variant 4, mRNA.				DKFZP586J1822	DKFZP586J1822
Homo sapiens	RefSeq	NM_152479.3	ILMN_24272	TTC9B	NM_152479.4	NM_152479.4		148014	141801874	NM_152479.4	TTC9B	NP_689692.2	ILMN_1682123	0002570390	S	492	TCAAGGTACTGGAGAAGCAGCAGGGCAACTTCAAGGCCACCTACCGTGCC	19	-	45415012-45415061	19q13.2b	Homo sapiens tetratricopeptide repeat domain 9B (TTC9B), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC33962; FLJ30373	MGC33962; FLJ30373
Homo sapiens	RefSeq	NM_145887.2	ILMN_1008	LRDD	NM_145887.2	NM_145887.2		55367	61742785	NM_145887.2	LRDD	NP_665894.2	ILMN_2406552	0000290736	A	2579	CTCCTGGTGCAGGCCCTGGAGCAGAGTGACCGGCAGGACGTGGCTGAAGA	11	-	799436-799485	11p15.5c	Homo sapiens leucine-rich repeats and death domain containing (LRDD), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10825539] [evidence TAS]	Interacting selectively with a death receptor [goid 5123] [pmid 10825539] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15073321] [evidence IPI]	MGC16925; PIDD; DKFZp434D229	MGC16925; PIDD; DKFZp434D229
Homo sapiens	RefSeq	NM_176806.2	ILMN_28268	MOCS2	NM_004531.3	NM_004531.3		4338	35493732	NM_004531.3	MOCS2	NP_004522.1	ILMN_1797925	0005550053	A	1307	CTTTAACTAGCTCAGAAACGTACTCCCCCACCAACCCCACCTCACCGCCC	5	-	52429813-52429862	5q11.2b	Homo sapiens molybdenum cofactor synthesis 2 (MOCS2), transcript variant 3, mRNA.	A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits [goid 19008] [pmid 9889283] [evidence NAS]	The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [pmid 9731530] [evidence TAS]; The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [pmid 9889283] [evidence NAS]; The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MPTS; MCBPE; MOCS2B; MOCO1; MOCS2A	MPTS; MCBPE; MOCS2B; MOCO1; MOCS2A
Homo sapiens	RefSeq	NM_004531.3	ILMN_28268	MOCS2	NM_004531.3	NM_004531.3		4338	35493732	NM_004531.3	MOCS2	NP_004522.1	ILMN_1770087	0003930114	I	7	GAGAACTCTTGTCAGCTCACGGCAGCAAGGACGGACTCGTTCTGAAGGCG	5	-	52441026-52441075	5q11.2b	Homo sapiens molybdenum cofactor synthesis 2 (MOCS2), transcript variant 3, mRNA.	A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits [goid 19008] [pmid 9889283] [evidence NAS]	The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [pmid 9731530] [evidence TAS]; The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [pmid 9889283] [evidence NAS]; The chemical reactions and pathways involving the nonmetallic element sulfur or compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione [goid 6790] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MPTS; MCBPE; MOCS2B; MOCO1; MOCS2A	MPTS; MCBPE; MOCS2B; MOCO1; MOCS2A
Homo sapiens	RefSeq	NM_183416.2	ILMN_174069	KIF1B	NM_015074.2	NM_015074.2		23095	41393562	NM_015074.2	KIF1B	NP_055889.2	ILMN_1659444	0003450452	A	1796	CCGGAGTGAGAGAAGCAACAGCGGGGAAGTTATCGTGACCTTAGAGCCCT	1	+	10278383-10278411:10279227-10279247	1p36.22c	Homo sapiens kinesin family member 1B (KIF1B), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence ISS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence ISS]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence ISS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence ISS]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence ISS]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16225668] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence ISS]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [pmid 10341097] [evidence TAS]	KIAA0591; HMSNII; CMT2; FLJ23699; KIAA1448; CMT2A; MGC134844; CMT2A1; KLP	KIAA0591; HMSNII; CMT2; KIAA1448; CMT2A; MGC134844; KLP; FLJ23699; CMT2A1
Homo sapiens	RefSeq	NM_015074.2	ILMN_174069	KIF1B	NM_015074.2	NM_015074.2		23095	41393562	NM_015074.2	KIF1B	NP_055889.2	ILMN_1735552	0007040707	I	10431	ATCTAACTGTGTGTGGTAACCTTGCGTCACGGAGCTGTTAGTGAACGAGG	1	+	10364165-10364214	1p36.22c	Homo sapiens kinesin family member 1B (KIF1B), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence ISS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence ISS]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence ISS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence ISS]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence ISS]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16225668] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence ISS]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [pmid 10341097] [evidence TAS]	KIAA0591; HMSNII; CMT2; FLJ23699; KIAA1448; CMT2A; MGC134844; CMT2A1; KLP	KIAA0591; HMSNII; CMT2; KIAA1448; CMT2A; MGC134844; KLP; FLJ23699; CMT2A1
Homo sapiens	RefSeq	NM_017935.2	ILMN_306934	BANK1	NM_001083907.1	NM_001083907.1		55024	144953888	NM_001083907.1	BANK1	NP_001077376.1	ILMN_1661646	0004010139	S	2714	GTTAAATGCGGTGTAGCAAAGTTATGGGGTCTGCTTGAGGGCACTAACCT	4	+	103214492-103214541	4q24a	Homo sapiens B-cell scaffold protein with ankyrin repeats 1 (BANK1), transcript variant 2, mRNA.		The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]		FLJ34204; FLJ20706; BANK	FLJ34204; FLJ20706; BANK
Homo sapiens	RefSeq	NM_012175.3	ILMN_5163	FBXO3	NM_012175.3	NM_012175.3		26273	48928041	NM_012175.3	FBXO3	NP_036307.2	ILMN_1749641	0002750427	I	1419	GACGCCGCTGCTCACGCCTTTTTTAGCAAGCCTTCTGCTGATGGAAGCAC	11	-	33763429-33763453:33763454-33763478	11p13c	Homo sapiens F-box protein 3 (FBXO3), transcript variant 1, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]	FBA; FBX3; DKFZp564B092	FBA; FBX3; DKFZp564B092
Homo sapiens	RefSeq	NM_012175.3	ILMN_5163	FBXO3	NM_012175.3	NM_012175.3		26273	48928041	NM_012175.3	FBXO3	NP_036307.2	ILMN_2273261	0002760048	I	1935	GACTAAACAACTTGAACGCTAGTGGTTTGTCCTTAGACAATCTGTCTTTG	11	-	33762913-33762962	11p13c	Homo sapiens F-box protein 3 (FBXO3), transcript variant 1, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]	FBA; FBX3; DKFZp564B092	FBA; FBX3; DKFZp564B092
Homo sapiens	RefSeq	NR_000009.1	ILMN_902	SNORD4B	NR_000009.1	NR_000009.1		26772	22546006	NR_000009.1	SNORD4B		ILMN_1720794	0002140086	S	24	GCGACCAAAGCCTGATCTTTGCTGATTAGTCATAATTAACTGACTGCACC	17	+	24074849-24074898	17q11.2a	Homo sapiens small nucleolar RNA, C/D box 4B (SNORD4B), small nucleolar RNA.				RNU101B; Z17B	RNU101B; Z17B
Homo sapiens	RefSeq	XM_001714242.1	ILMN_343163	LOC728897	XM_001714242.1	XM_001714242.1		728897	169217382	XM_001714242.1	LOC728897	XP_001714294.1	ILMN_3232414	0000730075	I	509	CAAAGAGAATATTTAACCATAAAGTCTTAAGGAAAAATTGTATGATTTAA					PREDICTED: Homo sapiens similar to coiled-coil domain containing 29 (LOC728897), mRNA.					
Homo sapiens	RefSeq	NM_001080841.1	ILMN_167125	LOC650137	NM_001080841.1	NM_001080841.1		650137	124249377	NM_001080841.1	LOC650137	NP_001074310.1	ILMN_2103003	0002030025	S	366	TAGTGGCCTGATGACACTCATGTGCTTTCTGGGACTTCTGGCCTCCTATG					Homo sapiens seven transmembrane helix receptor (LOC650137), mRNA.					
Homo sapiens	RefSeq	XM_939222.1	ILMN_167125	LOC650137	NM_001080841.1	NM_001080841.1		650137	124249377	NM_001080841.1	LOC650137	NP_001074310.1	ILMN_1802701	0007150148	S	362	TCAATAGTGGCCTGATGACACTCATGTGCTTTCTGGGACTTCTGGCCTCC					Homo sapiens seven transmembrane helix receptor (LOC650137), mRNA.					
Homo sapiens	RefSeq	NM_022829.4	ILMN_13280	SLC13A3	NM_022829.4	NM_022829.4		64849	58761539	NM_022829.4	SLC13A3	NP_073740.2	ILMN_1658519	0000610753	A	3585	GGGCCTTCGCATGTGCTGTTCCCTCTGCCTAGAACACTCTCTCCCAAGTA	20	-	45186873-45186922	20q13.12c	Homo sapiens solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (SLC13A3), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 15362] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 15362] [evidence IEA]	SDCT2; NADC3	SDCT2; NADC3
Homo sapiens	RefSeq	NM_022829.4	ILMN_13280	SLC13A3	NM_022829.4	NM_022829.4		64849	58761539	NM_022829.4	SLC13A3	NP_073740.2	ILMN_1675488	0006550326	I	63	AAGAAGGTGTGGAGCGCGCGGCGGCTGCTGGTGCTGCTGTTCACGCCGCT	20	-	45279986-45280035	20q13.12c	Homo sapiens solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (SLC13A3), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 15362] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 15362] [evidence IEA]	SDCT2; NADC3	SDCT2; NADC3
Homo sapiens	RefSeq	NM_017414.2	ILMN_162381	LOC728216	XM_001128283.1	XM_001128283.1		728216	113429272	XM_001128283.1	LOC728216	XP_001128283.1	ILMN_1740200	0006860180	I	1373	AGTGGGAGGCATCTGGGGGCCAAAGGTCAGTGGCAGGGGGTATTTCAGTA	22	-	18731295-18731344	22q11.21d	PREDICTED: Homo sapiens similar to ubiquitin specific peptidase 18 (LOC728216), mRNA.					ISG43; UBP43
Homo sapiens	RefSeq	XM_945814.1	ILMN_38371	PRNPIP	XM_945814.1	XM_945814.1		79033	88947696	XM_945814.1	PRNPIP	XP_950907.1	ILMN_1700076	0005810368	I	124	ACCCCCTTGGAGCCCCAGAGACATCTGAGGAATTGGTTCTTGCCAGACAC				1p34.1e	PREDICTED: Homo sapiens prion protein interacting protein, transcript variant 4 (PRNPIP), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	XM_926805.1	ILMN_40310	LOC648830	XM_937909.1	XM_937909.1		648830	88999325	XM_937909.1	LOC648830	XP_943002.1	ILMN_1656015	0003140736	S	61	GAGAAACTTACCAAGGATTCAGTGACAATTCGTGTGGACAATTTATGTCA					PREDICTED: Homo sapiens similar to Erythrocyte band 7 integral membrane protein (Stomatin) (Protein 7.2b) (LOC648830), mRNA.					
Homo sapiens	RefSeq	NM_006914.3	ILMN_7297	RORB	NM_006914.3	NM_006914.3		6096	62865658	NM_006914.3	RORB	NP_008845.2	ILMN_1746658	0002370561	S	3518	GAAATTTGTTCTGCCTGTGTCCTGGAGGCCTATACCTCTGTTATTTTCTG	9	+	76491851-76491900	9q21.13b	Homo sapiens RAR-related orphan receptor B (RORB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7935491] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IEA]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8858107] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR1F2; RZRB; bA133M9.1; ROR-BETA	NR1F2; RZRB; bA133M9.1; ROR-BETA
Homo sapiens	RefSeq	XM_001134396.1	ILMN_182970	LOC730254	XM_001134396.1	XM_001134396.1		730254	113411616	XM_001134396.1	LOC730254	XP_001134396.1	ILMN_3298993	0006290022	M	2238	GCATCAGGCTTTGGGAAGATATTAGGAAGAGAAATGGCCCAGGAGGTGGC	1	-	202728858-202728907	1q32.1f	PREDICTED: Homo sapiens hypothetical LOC730254 (LOC730254), mRNA.					
Homo sapiens	Unigene	Hs.334998	ILMN_86615	HS.334998	Hs.334998		Hs.334998		3741954	AI190745			ILMN_1822491	0002450543	S	63	GCAGCTTCAAGGGTGGTTCTGGCTTAGGGCATCTCATGAGTTGTGGTCAA	13	+	47219364-47219413		qd61b01.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1733929 3, mRNA sequence					
Homo sapiens	RefSeq	NM_032280.1	ILMN_25119	ZCCHC9	NM_032280.1	NM_032280.1		84240	14150026	NM_032280.1	ZCCHC9	NP_115656.1	ILMN_1723007	0000940338	S	4050	CCCCTGTAGCCAGGACTATGCTGTAGATATCAGTATGATCTGGGTGTGGC	5	+	80644316-80644365	5q14.1f	Homo sapiens zinc finger, CCHC domain containing 9 (ZCCHC9), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp761J139	DKFZp761J139
Homo sapiens	RefSeq	NM_014410.4	ILMN_24158	CLUL1	NM_014410.4	NM_014410.4		27098	40316929	NM_014410.4	CLUL1	NP_055225.1	ILMN_1682544	0002140689	I	83	GCACAGACGCCTCCAGGGGGCAGCACTCAAGCGCATCTTAGGAATGACAG	18	+	587080-587129	18p11.32c	Homo sapiens clusterin-like 1 (retinal) (CLUL1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]		RA337M	RA337M
Homo sapiens	RefSeq	NM_199167.1	ILMN_24158	CLUL1	NM_014410.4	NM_014410.4		27098	40316929	NM_014410.4	CLUL1	NP_055225.1	ILMN_1687518	0006900349	A	1274	AAGATGAGAGGGCAATTTGGCTGGGTGTCTGAACTGGCAAACCAGGCCCC	18	+	619234-619283	18p11.32c	Homo sapiens clusterin-like 1 (retinal) (CLUL1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]		RA337M	RA337M
Homo sapiens	RefSeq	NM_001093.2	ILMN_162398	ACACB	NM_001093.3	NM_001093.3		32	134142061	NM_001093.3	ACACB	NP_001084.3	ILMN_1763852	0002230678	S	9178	TAGCTGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAG	12	+	108190342-108190391	12q24.11a-q24.11b	Homo sapiens acetyl-Coenzyme A carboxylase beta (ACACB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15060529] [evidence EXP]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of fatty acid oxidation [goid 46320] [pmid 16054041] [evidence EXP]	Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]; Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein [goid 4075] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ACC2; ACCB; HACC275	ACC2; ACCB; HACC275
Homo sapiens	RefSeq	XM_933685.1	ILMN_38575	LOC646537	XM_933685.1	XM_933685.1		646537	89028172	XM_933685.1	LOC646537	XP_938778.1	ILMN_1651760	0006620202	S	121	TTCCAGTGGGACAAGATGTGGAGGTGGAAGACAATGATATTCACGATCCT	8	+	85119337-85119386		PREDICTED: Homo sapiens hypothetical protein LOC646537 (LOC646537), mRNA.					
Homo sapiens	RefSeq	NM_197973.2	ILMN_27137	ALG2	NM_197973.2	NM_197973.2		85365	55774980	NM_197973.2	ALG2	NP_932077.1	ILMN_1722688	0004540025	I	439	GAGCCAGGCCACACCGTCCTCAGCAGTGTCATGTGTTAAAAACGCCAAGC	9	-	101023160-101023209	9q22.33c	Homo sapiens asparagine-linked glycosylation 2 homolog (yeast, alpha-1,3-mannosyltransferase) (ALG2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16996505] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17196169] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17045351] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11278427] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17196169] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16996505] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14999017] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11278427] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17045351] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 17196169] [evidence IDA]	The chemical reactions and pathways resulting in the formation of dolichol-linked oligosaccharide, usually by a stepwise addition of glycosyl chains to endoplasmic reticulum membrane-bound dolichol-P [goid 6488] [pmid 12684507] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 16957052] [evidence IMP]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The addition of a sugar unit to a protein amino acid in the endoplasmic reticulum [goid 33577] [pmid 12684507] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [pmid 17196169] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [pmid 12445460] [evidence IDA]	Catalysis of the transfer of a mannose residue from GDP-mannose to an oligosaccharide, forming an alpha-1,3-linkage [goid 33] [pmid 12684507] [evidence IDA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 14999017] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with both a protein or protein complex and a membrane, in order to maintain the localization of the protein at a specific location on the membrane [goid 43495] [pmid 16957052] [evidence IMP]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11278427] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 12445460] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11883939] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 12445460] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 11883939] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 14999017] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 17045351] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 16957052] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 17196169] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 12445460] [evidence IPI]	CDGIi; hALPG2; FLJ14511	CDGIi; hALPG2; FLJ14511
Homo sapiens	RefSeq	NM_012291.3	ILMN_8363	ESPL1	NM_012291.4	NM_012291.4		9700	134276942	NM_012291.4	ESPL1	NP_036423.4	ILMN_1742145	0000540224	S	6218	GCTGGCATCGTGCTCAAGTACATCATGGCTGGTTGCCCCTTGTTTCTGGG	12	+	51972987-51973021:51973324-51973338	12q13.13e	Homo sapiens extra spindle pole bodies homolog 1 (S. cerevisiae) (ESPL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 12672959] [evidence IDA]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [pmid 12672959] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [evidence IEA]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 11509732] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11875078] [evidence TAS]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; The cell cycle process whereby the directed movement of the mitotic spindle to a specific location in the cell occurs [goid 40001] [pmid 12672959] [evidence NAS]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the first division of the meiotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner; this pairing off, referred to as synapsis, permits genetic recombination. One homolog (both sister chromatids) of each morphologic type goes into each of the resulting chromosome sets [goid 45143] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the mitotic metaphase to anaphase transition [goid 45842] [pmid 12672959] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of sister chromatid cohesion [goid 45875] [pmid 12194817] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12194817] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12672959] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [pmid 12672959] [evidence NAS]	SEPARIN; ESP1; KIAA0165; FLJ46492	SEPARIN; ESP1; KIAA0165; FLJ46492
Homo sapiens	RefSeq	XM_930170.1	ILMN_33576	LOC645006	XM_930170.1	XM_930170.1		645006	88976651	XM_930170.1	LOC645006	XP_935263.1	ILMN_1663141	0003610747	S	560	GTCCTGGAAACAAGAGGGAGTGATCGACTGTGCCAAATACTGCTGACAGG	4	-	144337091-144337140		PREDICTED: Homo sapiens hypothetical protein LOC645006 (LOC645006), mRNA.					
Homo sapiens	RefSeq	NM_012208.2	ILMN_12435	HARS2	NM_012208.2	NM_012208.2		23438	18201901	NM_012208.2	HARS2	NP_036340.1	ILMN_1715113	0003170519	S	2393	CCATTTCCTGTGCCAGAATCACTGCTCTATTCCATACCGTGCCATGGAGG	5	+	140058977-140059026	5q31.3b	Homo sapiens histidyl-tRNA synthetase 2, mitochondrial (putative) (HARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6427] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His) [goid 4821] [pmid 7755634] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	HO3; HARSL; HARSR	HO3; HARSL; HARSR
Homo sapiens	RefSeq	NM_003211.3	ILMN_29212	TDG	NM_003211.3	NM_003211.3		6996	59853161	NM_003211.3	TDG	NP_003202.3	ILMN_1777096	0001990253	A	2843	TTTTGTGCGGGTGCTTTGAAGTGCCTTGCATCAGGGATTAGGAGCAATTA	12	+	102906409-102906458	12q23.3a	Homo sapiens thymine-DNA glycosylase (TDG), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10583946] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9489705] [evidence TAS]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 9489705] [evidence TAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The disruption of the bond between the sugar in the backbone and the C or T base, causing the base to be removed and leaving a depyrimidinated sugar [goid 45008] [pmid 11937636] [evidence EXP]; The disruption of the bond between the sugar in the backbone and the C or T base, causing the base to be removed and leaving a depyrimidinated sugar [goid 45008] [pmid 10583946] [evidence EXP]	Interacting selectively with damaged DNA [goid 3684] [pmid 9489705] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the removal of mismatched pyrimidine bases in DNA. Enzymes with this activity recognize and remove pyrimidines present in mismatches by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apyrimidinic (AP) site [goid 8263] [pmid 8662714] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [pmid 10583946] [evidence EXP]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]		
Homo sapiens	RefSeq	NM_003211.3	ILMN_29212	TDG	NM_003211.3	NM_003211.3		6996	59853161	NM_003211.3	TDG	NP_003202.3	ILMN_1782331	0000070162	I	303	TGAATGAACAGCAAATGCCAGAAGAAGTTCCAGCCCCAGCTCCTGCTCAG	12	+	102894906-102894955	12q23.3a	Homo sapiens thymine-DNA glycosylase (TDG), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10583946] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9489705] [evidence TAS]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 9489705] [evidence TAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The disruption of the bond between the sugar in the backbone and the C or T base, causing the base to be removed and leaving a depyrimidinated sugar [goid 45008] [pmid 11937636] [evidence EXP]; The disruption of the bond between the sugar in the backbone and the C or T base, causing the base to be removed and leaving a depyrimidinated sugar [goid 45008] [pmid 10583946] [evidence EXP]	Interacting selectively with damaged DNA [goid 3684] [pmid 9489705] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the removal of mismatched pyrimidine bases in DNA. Enzymes with this activity recognize and remove pyrimidines present in mismatches by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apyrimidinic (AP) site [goid 8263] [pmid 8662714] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [pmid 10583946] [evidence EXP]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]		
Homo sapiens	RefSeq	XM_936516.1	ILMN_137312	CR1	XM_936516.1	XM_936516.1		1378	88952714	XM_936516.1	CR1	XP_941609.1	ILMN_1731118	0004390324	I	2791	AAGTGCAAGTGCAAGGAATGTGGGATCTTCCCGGTCATGGTTATTGCTCA				1q32.2a	PREDICTED: Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) (CR1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2972794] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with any component or product of the complement cascade to initiate a change in cell activity [goid 4875] [pmid 2972794] [evidence TAS]		
Homo sapiens	RefSeq	XM_929495.1	ILMN_30768	LOC646560	XM_929495.1	XM_929495.1		646560	88965794	XM_929495.1	LOC646560	XP_934588.1	ILMN_1664854	0000620095	S	263	TATCAGTGAAGGAACTTTCAACAGTCACCACTAATGTGCAGAAGTCTCAA	3	-	138101296-138101345	3q22.3a	PREDICTED: Homo sapiens similar to RAD51 associated protein 1 (LOC646560), mRNA.					
Homo sapiens	RefSeq	XM_944547.1	ILMN_33843	LOC649044	XM_944547.1	XM_944547.1		649044	88981217	XM_944547.1	LOC649044	XP_949640.1	ILMN_1655190	0005860458	I	1258	CAGGGGGGAAAAGAAACCCTTACCCAGTACATTGATGCCTGACATGACGC					PREDICTED: Homo sapiens hypothetical protein LOC649043, transcript variant 2 (LOC649044), mRNA.					
Homo sapiens	RefSeq	XM_943665.1	ILMN_40878	LOC643962	XM_943665.2	XM_943665.2		643962	113418215	XM_943665.2	LOC643962	XP_948758.1	ILMN_1754983	0004280491	S	1122	GGTTGAGAATGGTACTTCCTTTAAAGGTCCTTATGAAGAGCACACAGTGC				6q15a	PREDICTED: Homo sapiens hypothetical LOC643962 (LOC643962), mRNA.					
Homo sapiens	RefSeq	XM_931749.1	ILMN_34980	LOC643690	XM_931749.1	XM_931749.1		643690	89034306	XM_931749.1	LOC643690	XP_936842.1	ILMN_1699087	0006480273	S	1	ATGGGTGCCTCGCTGGATCAGAAGCTAAACAGACACCCTGCCGGATCTGG	11	+	103020748-103020797		PREDICTED: Homo sapiens hypothetical protein LOC643690 (LOC643690), mRNA.					
Homo sapiens	RefSeq	NM_003381.2	ILMN_172476	VIP	NM_003381.2	NM_003381.2		7432	37588851	NM_003381.2	VIP	NP_003372.1	ILMN_2357542	0003130372	A	240	CTTCGGCATGGCCTCTTTACAGGGCACCTTCTGCTCTCAGGTTGGGTGAC	6	+	153073380-153073419:153075301-153075310	6q25.2a	Homo sapiens vasoactive intestinal peptide (VIP), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10096039] [evidence TAS]; The regulated release of a fluid by a cell or group of cells in a multicellular organism [goid 7589] [pmid 4035357] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8389448] [evidence TAS]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 10096039] [evidence TAS]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC13587; PHM27	MGC13587; PHM27
Homo sapiens	RefSeq	NM_184041.1	ILMN_19652	ALDOA	NM_184041.1	NM_184041.1		226	34577109	NM_184041.1	ALDOA	NP_908930.1	ILMN_1736700	0002640088	I	103	AAGGGGTCCTGGTGACGAGTCCCGCGTTCTCTCCTTGAATCCACTCGCCA	16	+	29984647-29984696	16p11.2d	Homo sapiens aldolase A, fructose-bisphosphate (ALDOA), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 6000] [pmid 2825199] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [pmid 2825199] [evidence TAS]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [pmid 8598869] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate [goid 4332] [pmid 2825199] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	MGC17716; ALDA; MGC10942; MGC17767	MGC17716; ALDA; MGC10942; MGC17767
Homo sapiens	RefSeq	NM_021634.1	ILMN_16660	RXFP1	NM_021634.2	NM_021634.2		59350	85986600	NM_021634.2	RXFP1	NP_067647.2	ILMN_1749150	0001410594	S	1508	GCGCAGCTGTGGATGGAGAGTACTCATTGTCAGCTTGTAGGATCTTTGGC	4	+	159568023-159568072	4q32.1e	Homo sapiens relaxin/insulin-like family peptide receptor 1 (RXFP1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IEA]; The reproductive process in which the parent is separated from its offspring either by giving birth to live young or by laying eggs [goid 7567] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any hormone, naturally occurring substances secreted by specialized cells that affect the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42562] [evidence IEA]	MGC142177; LGR7.1; MGC138347; LGR7.10; LGR7.2; LGR7	LGR7.1; LGR7.10; LGR7.2
Homo sapiens	RefSeq	NM_203297.1	ILMN_17590	TRIM7	NM_203297.1	NM_203297.1		81786	44680129	NM_203297.1	TRIM7	NP_976042.1	ILMN_1692247	0002640053	I	620	CATGTGTGGGTGCATCTGTGGCAGGGGAGAAAAGAGCATGTGTCCAGACT	5	-	180627261-180627310	5q35.3g	Homo sapiens tripartite motif-containing 7 (TRIM7), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF90; GNIP	RNF90; GNIP
Homo sapiens	RefSeq	NM_145254.1	ILMN_14043	TMEM170A	NM_145254.1	NM_145254.1		124491	21687071	NM_145254.1	TMEM170A	NP_660297.1	ILMN_2212590	0006370019	S	796	GCCAAGTCAACAGTGTCTCTGGGGTGGCATCCTTTGCACTGAAATTTACA	16	-	75481131-75481180	16q23.1a	Homo sapiens transmembrane protein 170A (TMEM170A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ37611	FLJ37611
Homo sapiens	RefSeq	NM_012164.3	ILMN_28252	FBXW2	NM_012164.3	NM_012164.3		26190	118402583	NM_012164.3	FBXW2	NP_036296.2	ILMN_3251567	0003190390	S	8358	CACACTGTGATTAGACATGAGTAGTCCCTGCCAGTGGGATGTTCCTGTCC	9	-	123520032-123520081	9q33.2a	Homo sapiens F-box and WD repeat domain containing 2 (FBXW2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10531035] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15070733] [evidence IPI]	MGC117371; FBW2; Fwd2; Md6	FBW2; Fwd2; Md6
Homo sapiens	RefSeq	NM_152491.3	ILMN_19633	PM20D1	NM_152491.3	NM_152491.3		148811	47458826	NM_152491.3	PM20D1	NP_689704.3	ILMN_2293067	0004040594	I	1664	GCCCATCTGTCTTGCTCACTCTTAAACTCTCCCAAGAACAAGGCCGGGGT	1	-	205797588-205797637	1q32.1g	Homo sapiens peptidase M20 domain containing 1 (PM20D1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	Cps1; FLJ32569	Cps1; FLJ32569
Homo sapiens	RefSeq	XM_001720387.1	ILMN_342741	LOC729346	XM_001720387.1	XM_001720387.1		729346	169172797	XM_001720387.1	LOC729346	XP_001720439.1	ILMN_3241838	0006100020	S	422	TATCCCCGCCTAGATCTTTCAGTGAGTCTCTGCCTCAGCTACTCTTAGGA	8	+	7430081-7430130	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC729346 (LOC729346), mRNA.					
Homo sapiens	RefSeq	NM_000826.2	ILMN_14219	GRIA2	NM_000826.2	NM_000826.2		2891	74275353	NM_000826.2	GRIA2	NP_000817.2	ILMN_1660372	0006220750	S	3100	GCAGTGCATGCTGTCCCTTACGTGAGTCCTGGCATGGGAATGAATGTCAG	4	+	158504133-158504182	4q32.1d	Homo sapiens glutamate receptor, ionotropic, AMPA 2 (GRIA2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8003671] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8003671] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8003671] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA];  [goid 4971] [pmid 8003671] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 15277] [pmid 8003671] [evidence TAS]	HBGR2; GLURB; GLUR2	HBGR2; GLURB; GLUR2
Homo sapiens	RefSeq	XM_928690.1	ILMN_44270	LOC645681	XM_928690.1	XM_928690.1		645681	89027827	XM_928690.1	LOC645681	XP_933783.1	ILMN_1708570	0004010168	S	2435	CGTAGGCCTCAGTGTCATCAAGGAGACTCTGCTTGACATGCAGTCAAGGC	8	-	7631782-7631831		PREDICTED: Homo sapiens hypothetical protein LOC645681 (LOC645681), mRNA.					
Homo sapiens	RefSeq	NM_194325.1	ILMN_308243	ZNF30	NM_001099437.1	NM_001099437.1		90075	152963630	NM_001099437.1	ZNF30	NP_001092907.1	ILMN_1728230	0002570187	S	2236	ATGAGTGTTATACCCTAAGAGTCTGAGGAGTGTGGGAAGTGCTTCGTGTG	19	+	35435725-35435742:35435743-35435774	19q13.11c	Homo sapiens zinc finger protein 30 (ZNF30), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX28; FLJ20562; DKFZp686N19164	KOX28; FLJ20562; DKFZp686N19164
Homo sapiens	RefSeq	NM_000306.1	ILMN_168004	POU1F1	NM_000306.1	NM_000306.1		5449	4505954	NM_000306.1	POU1F1	NP_000297.1	ILMN_1706403	0001010341	S	840	CCTTCTTCTCAAGAGATCATGAGGATGGCTGAAGAACTGAATCTGGAGAA	3	-	87391845-87391894	3p11.2a	Homo sapiens POU class 1 homeobox 1 (POU1F1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 1487156] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9392392] [evidence TAS]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9482665] [evidence TAS]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of inositol trisphosphate [goid 32962] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43567] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whose specific outcome is the progression of a somatotropin secreting cell over time, from its formation to the mature structure. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60133] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1487156] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9482665] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	GHF-1; Pit-1 beta; PIT1; Pit-1	GHF-1; Pit-1 beta; PIT1; Pit-1
Homo sapiens	RefSeq	NM_014860.1	ILMN_8235	SUPT7L	NM_014860.1	NM_014860.1		9913	7662291	NM_014860.1	SUPT7L	NP_055675.1	ILMN_2072875	0003870671	S	3726	CATGGAGGGCTTTCTAAAACAGACTGCTCAGCCCACCCCCAGGGTTTCTG	2	-	27874164-27874213	2p23.2b	Homo sapiens suppressor of Ty 7 (S. cerevisiae)-like (SUPT7L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10987294] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [pmid 15870280] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15870280] [evidence IPI]	STAF65; STAF65(gamma); KIAA0764; ART1; MGC90306; SPT7L	STAF65; STAF65(gamma); KIAA0764; ART1; MGC90306; SPT7L
Homo sapiens	RefSeq	NM_001005270.1	ILMN_175385	OR4C12	NM_001005270.1	NM_001005270.1		283093	52627206	NM_001005270.1	OR4C12	NP_001005270.1	ILMN_2066904	0001990035	S	743	TCTTTGTGCCCTGTATATTTGTGTATCTGCGCTCAGTGACCACTCTGCCC	11	-	50003245-50003294	11p11.12c	Homo sapiens olfactory receptor, family 4, subfamily C, member 12 (OR4C12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-259	OR11-259
Homo sapiens	RefSeq	NM_015201.3	ILMN_12640	BOP1	NM_015201.3	NM_015201.3		23246	40353770	NM_015201.3	BOP1	NP_056016.1	ILMN_1715583	0001660435	S	2330	TGGGGTGGTCGTGCTGAAGTCAACAGAGCCTTTACCCTGTGCTGAAAAAA	8	-	145485922-145485928:145486056-145486098	8q24.3g	Homo sapiens block of proliferation 1 (BOP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	KIAA0124	KIAA0124
Homo sapiens	Unigene	Hs.398035	ILMN_89512	HS.398035	Hs.398035		Hs.398035		22813718	BU507485			ILMN_1818368	0003940114	S	535	GGGTGGGGAAAGCGACAGTAGGAAGGAACTTTGGGAAGATGATGCCGCCG	14	-	76568737-76568786		AGENCOURT_10309904 NIH_MGC_71 Homo sapiens cDNA clone IMAGE:6501425 5, mRNA sequence					
Homo sapiens	RefSeq	NM_138565.1	ILMN_4414	CTTN	NM_138565.1	NM_138565.1		2017	20357555	NM_138565.1	CTTN	NP_612632.1	ILMN_2393712	0003850632	A	2646	GAGCCGCCAGGAACCCTCCTCCTGTCAATGGGGGTGTAGTATTTTTGCCA	11	+	69959846-69959895	11q13.3c-q13.3d	Homo sapiens cortactin (CTTN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9054437] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9054437] [evidence TAS]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	EMS1; FLJ34459	EMS1; FLJ34459
Homo sapiens	RefSeq	NM_005222.2	ILMN_171290	DLX6	NM_005222.2	NM_005222.2		1750	82659114	NM_005222.2	DLX6	NP_005213.2	ILMN_2225151	0001770639	S	1568	CCCCCCAAACCCTGAACTGGAATCAGGAAAGACGGAGGAAACAATCAAAA	7	+	96478065-96478114	7q21.3c	Homo sapiens distal-less homeobox 6 (DLX6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 7907794] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 7907794] [evidence TAS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7907794] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC125283; MGC125282; MGC125285; MGC125284	MGC125283; MGC125282; MGC125285; MGC125284
Homo sapiens	RefSeq	NM_030657.2	ILMN_182992	LIM2	NM_030657.2	NM_030657.2		3982	21361299	NM_030657.2	LIM2	NP_085915.2	ILMN_1668521	0001500427	S	598	GCTCATGACGTTCTTCGCAGGGATTTTCTACATGTGCGCCTACCGGGTGC	19	-	56575298-56575328:56575571-56575589	19q13.33d	Homo sapiens lens intrinsic membrane protein 2, 19kDa (LIM2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [pmid 2584203] [evidence NAS]	The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a junction between cells [goid 7043] [pmid 2584203] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence NAS]	MP19	MP19
Homo sapiens	RefSeq	XM_940693.1	ILMN_31921	LOC388720	XM_940693.2	XM_940693.2		388720	113412527	XM_940693.2	LOC388720	XP_945786.1	ILMN_1754990	0001940050	A	417	ATCGAGAGTGCCCTTCTGATGAATGTGGTGCTGGGGTGTTTATGGCAAGC				1q31.2b	PREDICTED: Homo sapiens similar to ubiquitin and ribosomal protein S27a precursor (LOC388720), mRNA.					
Homo sapiens	RefSeq	NM_152582.3	ILMN_20554	CT45-2	NM_152582.3	NM_152582.3		158852	37537697	NM_152582.3	CT45-2	NP_689795.2	ILMN_1664918	0007650014	S	964	CAGAGGCTAAGAAATTTCTGTTAGTAAAAGATGTTCTTTTTCCCAAAAAA				Xq26.3b	Homo sapiens cancer/testis antigen CT45-2 (CT45-2), mRNA.					
Homo sapiens	RefSeq	NM_138709.1	ILMN_20803	DAB2IP	NM_032552.2	NM_032552.2		153090	94967022	NM_032552.2	DAB2IP	NP_115941.2	ILMN_1808850	0006450377	A	3375	CATTGATGCCCAGGAGAAGCGCATTGCCTCGTTGGATGCCGCCAATGCCC	9	+	123583639-123583651:123584431-123584467	9q33.2a	Homo sapiens DAB2 interacting protein (DAB2IP), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ39072; DIP1/2; AF9Q34; AIP1; KIAA1743	FLJ39072; DIP1/2; AF9Q34; AIP1; KIAA1743
Homo sapiens	RefSeq	NM_032552.1	ILMN_20803	DAB2IP	NM_032552.2	NM_032552.2		153090	94967022	NM_032552.2	DAB2IP	NP_115941.2	ILMN_1783161	0001510095	I	5056	ACTCTTTCCGACTGCCCAGAAAGTGGGGGTGGAGGACCGAGGCTACAGCT	9	+	123587233-123587282	9q33.2a	Homo sapiens DAB2 interacting protein (DAB2IP), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ39072; DIP1/2; AF9Q34; AIP1; KIAA1743	DIP1/2; AF9Q34; AIP1; KIAA1743
Homo sapiens	RefSeq	NM_015256.2	ILMN_27750	ACSL6	NM_015256.2	NM_015256.2		23305	57165409	NM_015256.2	ACSL6	NP_056071.2	ILMN_2278242	0005570477	I	1097	CAGTGGGCTCCCACTTGTGCGGATGTGCACATTTCCTATTTGCCTTTAGC	5	-	131347222-131347246:131347247-131347271	5q31.1b	Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence NAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10548543] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 10548543] [evidence NAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [pmid 10548543] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	FACL6; ACS2; KIAA0837; LACS5; LACS2; FLJ16173	FACL6; ACS2; KIAA0837; LACS5; LACS2; FLJ16173
Homo sapiens	RefSeq	NM_015256.2	ILMN_27750	ACSL6	NM_015256.2	NM_015256.2		23305	57165409	NM_015256.2	ACSL6	NP_056071.2	ILMN_2378555	0006770255	A	2937	GCAGTGGCTTAATCATGGCTCATTGCAGTCTCCATCTCCTGGGCTCGAGT	5	-	131323750-131323799	5q31.1b	Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence NAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10548543] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 10548543] [evidence NAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [pmid 10548543] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	FACL6; ACS2; KIAA0837; LACS5; LACS2; FLJ16173	FACL6; ACS2; KIAA0837; LACS5; LACS2; FLJ16173
Homo sapiens	Unigene	Hs.580401	ILMN_132582	HS.580401	Hs.580401		Hs.580401		83151543	DB311606			ILMN_1846128	0005080170	S	272	GCAGAAACCTGTAACCACAGAGGGTCAGAAAGGGCAAACCCCCAAAAGAG	2	+	26736193-26736242		DB311606 BRTHA2 Homo sapiens cDNA clone BRTHA2019796 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001004459.1	ILMN_24183	OR1S2	NM_001004459.1	NM_001004459.1		219958	52317167	NM_001004459.1	OR1S2	NP_001004459.1	ILMN_1663913	0000520520	S	79	CTCCTGGGACTCTCCAACCAGGCTGAACATCAAAACCTCCTCTTTGTGCT	11	-	57971525-57971574	11q12.1b	Homo sapiens olfactory receptor, family 1, subfamily S, member 2 (OR1S2), mRNA.				OR11-231	OR11-231
Homo sapiens	RefSeq	XR_041035.1	ILMN_344576	LOC728353	XR_041035.1	XR_041035.1		728353	169207008	XR_041035.1	LOC728353		ILMN_3225948	0003440333	A	485	GCCGGGACAGAGGACTCATACCAGGGAAATGGAGCCCAGCCTCGTGATAA	14	+	20922582-20922631	14q11.2c	PREDICTED: Homo sapiens misc_RNA (LOC728353), miscRNA.					
Homo sapiens	RefSeq	XM_001714030.1	ILMN_342402	LOC642838	XM_001714030.1	XM_001714030.1		642838	169163334	XM_001714030.1	LOC642838	XP_001714082.1	ILMN_3241563	0001820519	S	415	TTTTTGGCGCCCCCGGTGCCGCGGTTATTTGCCCGCCGCGGCTTTTTGCA	2	+	91361371-91361420	2p11.1d	PREDICTED: Homo sapiens similar to hCG1742442 (LOC642838), mRNA.					
Homo sapiens	RefSeq	NM_058183.2	ILMN_9505	SON	NM_058183.2	NM_058183.2		6651	21040317	NM_058183.2	SON	NP_478063.2	ILMN_1668463	0003180653	I	6385	CTGACTGAGGAGTGGGACGGTTCGTTTGAATGGAGGAGGTGTTGAGTGAG	21	+	33851736-33851785	21q22.11c	Homo sapiens SON DNA binding protein (SON), transcript variant e, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10509013] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8031013] [evidence TAS]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ21099; SON3; KIAA1019; BASS1; C21orf50; NREBP; DBP-5	FLJ21099; SON3; KIAA1019; BASS1; C21orf50; NREBP; DBP-5
Homo sapiens	RefSeq	NM_005822.1	ILMN_25728	DSCR1L1	NM_005822.1	NM_005822.1		10231	5032234	NM_005822.1	DSCR1L1	NP_005813.1	ILMN_1794949	0004250196	S	2895	GTAATTCCTTCACTAGGTTGGGTTTGGGGAGGGGGGAAAAGAGGGGCTTT	6	-	46296675-46296724	6p12.3e	Homo sapiens Down syndrome critical region gene 1-like 1 (DSCR1L1), mRNA.				MCIP2; CSP2; ZAKI-4; hRCN2; RCN2	MCIP2; CSP2; ZAKI-4; hRCN2; RCN2
Homo sapiens	RefSeq	NM_133261.1	ILMN_29084	GIPC3	NM_133261.1	NM_133261.1		126326	18959203	NM_133261.1	GIPC3	NP_573568.1	ILMN_1722826	0005860047	S	832	ACGTCCAAGAAGACAGCGAGCGCCCAGGAGTTTGCACGCTGTTTAGACTC	19	+	3541054-3541103	19p13.3e	Homo sapiens GIPC PDZ domain containing family, member 3 (GIPC3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_138296.2	ILMN_26672	PTCRA	NM_138296.2	NM_138296.2		171558	110227623	NM_138296.2	PTCRA	NP_612153.2	ILMN_2091920	0004880600	S	993	CCCCTTGAGAATGGTGATCCACCCAGTTACAGGGGCATTTAGGGAGCAGA	6	+	42893486-42893535	6p21.1d	Homo sapiens pre T-cell antigen receptor alpha (PTCRA), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PT-ALPHA; PTA	PT-ALPHA; PTA
Homo sapiens	RefSeq	NM_016620.2	ILMN_26677	ZNF644	NM_032186.3	NM_032186.3		84146	41152090	NM_032186.3	ZNF644	NP_115562.3	ILMN_1730118	0002490369	A	1618	ATAAATGTGCTGTGAGGAATGGAAAATATGGTGCAGGTGTCTTGGTCATG	1	-	91381169-91381218	1p22.2a	Homo sapiens zinc finger protein 644 (ZNF644), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BM-005; Zep-2; KIAA1221; MGC70410; MGC60165	BM-005; MGC70410; MGC60165; Zep-2; KIAA1221
Homo sapiens	RefSeq	NM_021268.1	ILMN_25972	IFNA17	NM_021268.1	NM_021268.1		3451	10880984	NM_021268.1	IFNA17	NP_067091.1	ILMN_1652376	0003460088	S	903	TGTGGTGAATGTAACAATATATGTTCTTCATATTTAGCCAATATATTAAT	9	-	21227269-21227318	9p21.3d	Homo sapiens interferon, alpha 17 (IFNA17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 3891272] [evidence TAS]	Interacting selectively with the interferon-alpha/beta receptor [goid 5132] [pmid 3891272] [evidence TAS]	IFNA	IFNA
Homo sapiens	RefSeq	NM_002964.3	ILMN_13072	S100A8	NM_002964.3	NM_002964.3		6279	21614543	NM_002964.3	S100A8	NP_002955.2	ILMN_1729801	0006060468	S	253	TAACTTCCAGGAGTTCCTCATTCTGGTGATAAAGATGGGCGTGGCAGCCC	1	-	153362613-153362662	1q21.3c	Homo sapiens S100 calcium binding protein A8 (S100A8), mRNA.		The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 3313057] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 2149559] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CFAG; 60B8AG; MRP8; CGLA; L1Ag; MIF; MA387; CAGA; CP-10; NIF; P8	CFAG; 60B8AG; MRP8; CGLA; L1Ag; MIF; MA387; CAGA; CP-10; NIF; P8
Homo sapiens	RefSeq	NM_005633.2	ILMN_11376	SOS1	NM_005633.2	NM_005633.2		6654	15529995	NM_005633.2	SOS1	NP_005624.2	ILMN_1767135	0002140519	S	3844	GTGGACCTTCATTCCATTGCTGGGCCGCCTGTTCCTCCACGACAAAGCAC	2	-	39066577-39066626	2p22.1c	Homo sapiens son of sevenless homolog 1 (Drosophila) (SOS1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9690470] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8810325] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7739560] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8479541] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8493579] [evidence EXP]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8493579] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8493579] [evidence TAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [pmid 9790532] [evidence TAS]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [pmid 9790532] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12029088] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14679214] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10206341] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14679214] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9690470] [evidence IPI]	GGF1; GINGF; NS4; GF1; HGF	NS4; HGF; GGF1; GINGF; GF1
Homo sapiens	RefSeq	XM_001725490.1	ILMN_341672	LOC100131234	XM_001725490.1	XM_001725490.1		100131234	169162363	XM_001725490.1	LOC100131234	XP_001725542.1	ILMN_3283782	0007000075	M	170	TATTTTTCATTAGAATTAACAGAATCTCAGAGCTGGTAGAAAGTATAGAA				1q31.3d	PREDICTED: Homo sapiens familial acute myelogenous leukemia related factor (LOC100131234), mRNA.					
Homo sapiens	RefSeq	NM_003573.1	ILMN_174707	LTBP4	NM_001042545.1	NM_001042545.1		8425	110347436	NM_001042545.1	LTBP4	NP_001036010.1	ILMN_1665219	0004290315	S	4791	TGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCA	19	+	41135556-41135605	19q13.2b	Homo sapiens latent transforming growth factor beta binding protein 4 (LTBP4), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 9660815] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 9660815] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9660815] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9660815] [evidence TAS]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [pmid 9660815] [evidence TAS]; Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [pmid 9660815] [evidence IDA]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [pmid 9660815] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 9660815] [evidence TAS]	Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [pmid 9660815] [evidence NAS]; Interacting selectively with an integrin [goid 5178] [pmid 9660815] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9660815] [evidence NAS]; Interacting selectively with any glycan (polysaccharide) containing a substantial proportion of aminomonosaccharide residues [goid 5539] [pmid 9660815] [evidence NAS]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [pmid 9660815] [evidence IDA]	FLJ90018; LTBP-4L; LTBP-4; FLJ46318	FLJ90018; LTBP-4L; LTBP-4
Homo sapiens	RefSeq	NM_000040.1	ILMN_4236	APOC3	NM_000040.1	NM_000040.1		345	4557322	NM_000040.1	APOC3	NP_000031.1	ILMN_1722070	0002630010	S	435	AAAGGGACAGTATTCTCAGTGCTCTCCTACCCCACCTCATGCCTGGCCCC	11	+	116208899-116208948	11q23.3b	Homo sapiens apolipoprotein C-III (APOC3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 4345202] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11060345] [evidence IDA]; A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver [goid 34361] [pmid 16935699] [evidence IDA]; A triglyceride-rich lipoprotein particle that typically contains APOB100, APOE and APOCs and has a density of 1.006-1.019 g/ml and a diameter of between 25-30 nm. IDL particles are found in blood and are formed by the delipidation of very-low-density lipoprotein particles (VLDL). IDL particles are removed from blood by the liver, following binding to the APOE receptor, or are converted to low-density lipoprotein (LDL) [goid 34363] [pmid 17336988] [evidence IDA]; A mature high-density lipoprotein (HDL) particle, converted from discoidal HDL particles following the esterification of cholesterol in the particle by phosphatidylcholine-sterol O-acyltransferase (lecithin cholesterol acyltransferase; LCAT) [goid 34366] [pmid 17438339] [evidence IDA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 16443932] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of triacylglycerol, any triester of glycerol [goid 19433] [pmid 11060345] [evidence IDA]; A series of molecular signals within the cell that are mediated by the Cdc42 protein switching to a GTP-bound active state [goid 32488] [pmid 16443932] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [pmid 16443932] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [pmid 11162594] [evidence IDA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [pmid 11162594] [evidence IDA]; The acquisition, loss or modification of a protein or lipid within a high-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL [goid 34375] [pmid 17438339] [evidence IMP]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids [goid 45717] [pmid 11060345] [evidence IDA]; Any process that stops or reduces the activity of the enzyme lipoprotein lipase [goid 51005] [pmid 11060345] [evidence IDA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 11060345] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 4066713] [evidence IDA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [pmid 11162594] [evidence IC ]; Modulates the activity of an enzyme [goid 30234] [pmid 11060345] [evidence IDA]	APOCIII; MGC150353	APOCIII; MGC150353
Homo sapiens	RefSeq	NM_001006681.1	ILMN_164014	SPIN2B	NM_001006681.1	NM_001006681.1		474343	56682944	NM_001006681.1	SPIN2B	NP_001006682.1	ILMN_1769458	0006280528	I	259	CCGATTTGGGCACGTGAGGCCCGCGATCCCCGGCGGTGGACGCCAGGCAG	X	-	57164396-57164445	Xp11.1b	Homo sapiens spindlin family, member 2B (SPIN2B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]		SPIN2_duplicate; dJ323P24.2; SPIN-2	SPIN2_duplicate; dJ323P24.2; SPIN-2
Homo sapiens	RefSeq	XM_932217.1	ILMN_165074	LOC728518	XM_001127626.1	XM_001127626.1		728518	113411679	XM_001127626.1	LOC728518	XP_001127626.1	ILMN_1681760	0004280528	A	1186	CTGCGTTTTCCATCACAATAGAGGACGATATGTTGATGGCCTTTTCCTAC	1	-	217851741-217851790	1q41c	PREDICTED: Homo sapiens hypothetical LOC728518 (LOC728518), mRNA.					
Homo sapiens	RefSeq	Hs.583800	ILMN_177214	LOC642879	XR_016231.1	XR_016231.1		642879	113420057	XR_016231.1	LOC642879		ILMN_1911374	0000580438	S	76	CCGCTAGAGTGGGCGGTCCCTTTGGTGTCATCGCACTGTCTTCATAGCCT	8	+	37044367-37044416	8p12a	PREDICTED: Homo sapiens similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 (LOC642879), mRNA.					
Homo sapiens	RefSeq	XR_016793.2	ILMN_175687	LOC645101	XR_016793.2	XR_016793.2		645101	169165072	XR_016793.2	LOC645101		ILMN_3294205	0006480725	M	58	GTGAAGACATGCAGAGAAGAACATAAGAAGTTGAAACCAGATGGCCCTGT	3	+	26232874-26232923	3p24.2a	PREDICTED: Homo sapiens similar to non-histone chromosomal protein (LOC645101), mRNA.					
Homo sapiens	Unigene	Hs.132376	ILMN_77312	HS.132376	Hs.132376		Hs.132376		83085331	DB335929			ILMN_1892652	0002370470	S	138	GGGAGGAGGGGAGAGTAGTTAAGAGTGGAGACACTGGCATGAGAGGATGC	11	+	127197097-127197146		DB335929 TESTI2 Homo sapiens cDNA clone TESTI2001868 3, mRNA sequence					
Homo sapiens	Unigene	Hs.550382	ILMN_110285	HS.550382	Hs.550382		Hs.550382		11599265	BF514086			ILMN_1835033	0001050731	S	182	AGTTACACACAGGGGATGGAAAGGCTGAGAAGCCAAACAGCAGGAAGCCG	2	+	128174491-128174540		UI-H-BW1-amw-c-04-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3071238 3, mRNA sequence					
Homo sapiens	RefSeq	XM_936601.1	ILMN_46001	LOC647546	XM_936601.2	XM_936601.2		647546	113423721	XM_936601.2	LOC647546	XP_941694.2	ILMN_1709135	0006960121	S	3752	TTCTTGTCACCCCAGTTGGTCCAGTTGTCTCTGTCACCACAGCCGATGGC					PREDICTED: Homo sapiens similar to K07E12.1a (LOC647546), mRNA.					
Homo sapiens	RefSeq	NM_005913.1	ILMN_2579	MC5R	NM_005913.1	NM_005913.1		4161	5174534	NM_005913.1	MC5R	NP_005904.1	ILMN_1779501	0002120753	S	924	GATTATTTGCTGCCGTGGTTTCAGGATCGCCTGCAGCTTTCCCAGAAGGG	18	+	13816688-13816737	18p11.21c	Homo sapiens melanocortin 5 receptor (MC5R), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7739752] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 7739752] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [pmid 7739752] [evidence TAS]		
Homo sapiens	RefSeq	NM_012179.3	ILMN_28646	FBXO7	NM_001033024.1	NM_001033024.1		25793	74229028	NM_001033024.1	FBXO7	NP_001028196.1	ILMN_1745962	0004780048	A	1371	TTGCCAGGGCGAGGCGGCCCCAATGACAGATTTCCCTTTAGACCCAGCAG	22	+	31224431-31224480	22q12.3a	Homo sapiens F-box protein 7 (FBXO7), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10531035] [evidence TAS]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [pmid 15145941] [evidence IDA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15145941] [evidence IPI]	FBX07; FBX; FBX7; DKFZp686B08113	FBX07; FBX; FBX7; DKFZp686B08113
Homo sapiens	RefSeq	NM_001033024.1	ILMN_28646	FBXO7	NM_001033024.1	NM_001033024.1		25793	74229028	NM_001033024.1	FBXO7	NP_001028196.1	ILMN_1715963	0004670327	I	77	AGGCGACGGGAAGCGCGGGTGGTCGGCTGGGGTCCGGCTCCTGGAGAACA	22	+	31201300-31201348:31201349-31201349	22q12.3a	Homo sapiens F-box protein 7 (FBXO7), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10531035] [evidence TAS]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [pmid 15145941] [evidence IDA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15145941] [evidence IPI]	FBX07; FBX; FBX7; DKFZp686B08113	FBX07; FBX; FBX7; DKFZp686B08113
Homo sapiens	RefSeq	NM_014603.1	ILMN_26231	CDR2L	NM_014603.1	NM_014603.1		30850	32698689	NM_014603.1	CDR2L	NP_055418.1	ILMN_2128770	0003940482	S	3413	CTGCTCCCCAGCTCTGTAGTGGCAGACCAGCGTCACCTTTGAAGTATACG	17	+	70513367-70513416	17q25.1c	Homo sapiens cerebellar degeneration-related protein 2-like (CDR2L), mRNA.				HUMPPA	HUMPPA
Homo sapiens	RefSeq	NM_004265.2	ILMN_18999	FADS2	NM_004265.2	NM_004265.2		9415	14141180	NM_004265.2	FADS2	NP_004256.1	ILMN_2075065	0000380224	S	2232	AGTCCCTCGTCTCTTGTGACTCAGCAGAGGCAGTGGCCACGTTCAGGGAG	11	+	61390484-61390533	11q12.2b	Homo sapiens fatty acid desaturase 2 (FADS2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9867867] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9867867] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of an unsaturated fatty acid, any fatty acid containing one or more double bonds between carbon atoms [goid 6636] [pmid 9867867] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water [goid 16717] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	SLL0262; LLCDL2; FADSD6; D6D; DES6; TU13	SLL0262; LLCDL2; FADSD6; D6D; DES6; TU13
Homo sapiens	RefSeq	XM_928643.1	ILMN_172192	LOC643668	XR_016986.1	XR_016986.1		643668	113423236	XR_016986.1	LOC643668		ILMN_1813801	0000270692	S	428	TTGCAGACAAGGATCTTCTGGAACCTGGCTGCTCGGTCAGGCTCAACCAC	12	+	18737391-18737440	12p12.3b	PREDICTED: Homo sapiens similar to peptidase (prosome, macropain) 26S subunit, ATPase 1 (LOC643668), mRNA.					
Homo sapiens	RefSeq	NM_173643.1	ILMN_12761	ZNF663	NM_173643.1	NM_173643.1		284747	27735064	NM_173643.1	ZNF663	NP_775914.1	ILMN_1692903	0004890360	S	2390	ATAGACTGGATAACTGCTTCATGTGCCCCCTACCCTCCACCCCACTGCCC	20	-	44476556-44476605		Homo sapiens zinc finger protein 663 (ZNF663), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC118776; DKFZp547G0215	MGC118776; DKFZp547G0215
Homo sapiens	RefSeq	NM_001003407.1	ILMN_22411	ABLIM1	NM_001003407.1	NM_001003407.1		3983	51173712	NM_001003407.1	ABLIM1	NP_001003407.1	ILMN_2396672	0006400243	A	6284	GCATCCTCCTGTGTATGGAAGAGACAGGTGACCGCTCCAGGTTGGGTGCT	10	-	116194264-116194313	10q25.3a	Homo sapiens actin binding LIM protein 1 (ABLIM1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9245787] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9245787] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9245787] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 9245787] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0059; FLJ14564; MGC1224; LIMATIN; LIMAB1; DKFZp781D0148; ABLIM	KIAA0059; FLJ14564; MGC1224; LIMATIN; LIMAB1; DKFZp781D0148; ABLIM
Homo sapiens	RefSeq	NM_006940.4	ILMN_16221	SOX5	NM_006940.4	NM_006940.4		6660	30061559	NM_006940.4	SOX5	NP_008871.3	ILMN_1718912	0002260373	I	28	GGACTCACTTGACAGGTTCAGTTGGAGACGATCATAGGTGGCTGCTGTGA	12	-	24102560-24102609	12p12.1c-p12.1b	Homo sapiens SRY (sex determining region Y)-box 5 (SOX5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8812465] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8812465] [evidence TAS]	MGC35153; L-SOX5	MGC35153; L-SOX5
Homo sapiens	RefSeq	NM_017820.2	ILMN_5776	EXD3	NM_017820.3	NM_017820.3		54932	145279203	NM_017820.3	EXD3	NP_060290.3	ILMN_1735463	0006520438	S	2665	ACCTGGGCTGCGGTGCTTCTACTGCTGCACGGGCTGTGGAAAGGTCTTCT	9	-	140201514-140201563	9q34.3f	Homo sapiens exonuclease 3'-5' domain containing 3 (EXD3), mRNA.				FLJ30442; MGC131904; MGC74981	FLJ30442; MGC131904; MGC74981
Homo sapiens	RefSeq	NM_024815.2	ILMN_1454	NUDT18	NM_024815.3	NM_024815.3		79873	118026926	NM_024815.3	NUDT18	NP_079091.3	ILMN_1787885	0003170451	S	1357	AGCTTTCTGCACCCCCAGTGGCATCTCCTCATCACGTTCTGTGCCGTCCT	8	-	22020442-22020491	8p21.3a	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 18 (NUDT18), mRNA.			Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	FLJ22494	FLJ22494
Homo sapiens	Unigene	Hs.560963	ILMN_114562	HS.560963	Hs.560963		Hs.560963		27879042	BX112872			ILMN_1855130	0007380326	S	393	ATCACCAGGAACCACCAGAAGCTGGAGGAGGCCAGGAAGGGCGTGCTAGA	20	-	51578926-51578975		BX112872 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998B113810, mRNA sequence					
Homo sapiens	RefSeq	NM_018008.2	ILMN_181389	FEZF2	NM_018008.2	NM_018008.2		55079	21361675	NM_018008.2	FEZF2	NP_060478.2	ILMN_1750706	0003460592	S	1723	TCCAGTGCGCCGAAACGTATTTAATTCCAGGCCTCCGCTTCTCCTGGGGC	3	-	62330531-62330580	3p14.2b	Homo sapiens FEZ family zinc finger 2 (FEZF2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF312; FKSG36; Zfp312; Fez; FLJ10142; FEZL; TOF	FKSG36; Fez; FLJ10142; FEZL; TOF
Homo sapiens	RefSeq	NM_203403.1	ILMN_162488	C9ORF150	NM_203403.1	NM_203403.1		286343	42822875	NM_203403.1	C9orf150	NP_981948.1	ILMN_1701361	0002600379	S	2256	CCGATAGCCTACTATCAGCATCCTACTACTGCTTCCCTAAAGCAGAATTG	9	+	12811610-12811659	9p23b	Homo sapiens chromosome 9 open reading frame 150 (C9orf150), mRNA.				HYST0841; MGC46502; FLJ90271; FLJ38505; bA3L8.2	HYST0841; MGC46502; FLJ90271; FLJ38505; bA3L8.2
Homo sapiens	RefSeq	NM_020714.1	ILMN_18809	ZNF490	NM_020714.1	NM_020714.1		57474	29789111	NM_020714.1	ZNF490	NP_065765.1	ILMN_1791206	0006060360	S	6266	GGTGAACCATCCTTACATTCCAGGGACAAATCTCACTTGGTTATATTGCA	19	-	12547673-12547722	19p13.2a	Homo sapiens zinc finger protein 490 (ZNF490), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1198	KIAA1198
Homo sapiens	RefSeq	NM_203346.1	ILMN_6747	HDLBP	NM_203346.2	NM_203346.2		3069	133908638	NM_203346.2	HDLBP	NP_976221.1	ILMN_1699797	0005810706	I	53	CTCGGAGCGTCCCGGCTTCTCCCGCGCGGGGGGCGAGTAAGCCAGCGGCA	2	-	242212199-242212248	2q37.3f	Homo sapiens high density lipoprotein binding protein (HDLBP), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1318310] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 1318310] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [pmid 1318310] [evidence TAS]	HBP; VGL; FLJ16432; PRO2900	HBP; VGL; FLJ16432
Homo sapiens	Unigene	Hs.544884	ILMN_108209	HS.544884	Hs.544884		Hs.544884		13534887	BG542654			ILMN_1854241	0007380044	S	290	GGCCTATTCTTTGGGGTCTGGAGAAACTCACCCATAACATGGTTTAGGCC	7	-	126770855-126770904		602571480F1 NIH_MGC_77 Homo sapiens cDNA clone IMAGE:4696170 5, mRNA sequence					
Homo sapiens	RefSeq	NM_014398.2	ILMN_21715	LAMP3	NM_014398.2	NM_014398.2		27074	38455384	NM_014398.2	LAMP3	NP_055213.2	ILMN_2170813	0000520059	S	2800	CCACTCTCTGGAAGGAGACTGAGGGGCTTTGTAAAACATTAGTCAGTTGC	3	-	184323144-184323193	3q27.1a	Homo sapiens lysosomal-associated membrane protein 3 (LAMP3), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 9721848] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9721848] [evidence TAS]		TSC403; DC-LAMP; CD208; LAMP; DCLAMP	TSC403; DC-LAMP; CD208; LAMP; DCLAMP
Homo sapiens	RefSeq	NM_014398.2	ILMN_21715	LAMP3	NM_014398.2	NM_014398.2		27074	38455384	NM_014398.2	LAMP3	NP_055213.2	ILMN_2170814	0007320546	S	2965	GAGTGTATAGCCCCATCTTGTGGTAACTTGCTGCTTCTGCACTTCATATC	3	-	184322979-184323028	3q27.1a	Homo sapiens lysosomal-associated membrane protein 3 (LAMP3), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 9721848] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9721848] [evidence TAS]		TSC403; DC-LAMP; CD208; LAMP; DCLAMP	TSC403; DC-LAMP; CD208; LAMP; DCLAMP
Homo sapiens	RefSeq	XR_019250.2	ILMN_176710	LOC643960	XR_019250.2	XR_019250.2		643960	169164708	XR_019250.2	LOC643960		ILMN_3289655	0004280670	M	346	GCAGACCCATACCAGCCAGTGTACCAGGTTCAAGGCATTTGTTGCCACTG				2q31.1e	PREDICTED: Homo sapiens misc_RNA (LOC643960), miscRNA.					
Homo sapiens	RefSeq	NM_001015038.1	ILMN_15659	PAGE2B	NM_001015038.1	NM_001015038.1		389860	62632766	NM_001015038.1	PAGE2B	NP_001015038.1	ILMN_1706140	0004850528	S	1	CTTTCCGCCATCTTGATTCTTTGTCACTGACCGAGACTCAGCCGTGGGAA	X	+	55101504-55101547:55102467-55102472	Xp11.21a	Homo sapiens P antigen family, member 2B (PAGE2B), mRNA.				GAGEE3	GAGEE3
Homo sapiens	RefSeq	NR_023915.1	ILMN_366160	IPW	NR_023915.1	NR_023915.1		3653	193211482	NR_023915.1	IPW		ILMN_3246604	0000830474	S	4071	GACATCATCTGGACTCTCCTTTGTTTTTGCTGGTTTGGAGTTAGGACATC	15	+	25367196-25367245	15q11.2e	Homo sapiens imprinted in Prader-Willi syndrome (non-protein coding) (IPW), non-coding RNA.					
Homo sapiens	RefSeq	NM_001805.2	ILMN_26826	CEBPE	NM_001805.2	NM_001805.2		1053	28872799	NM_001805.2	CEBPE	NP_001796.2	ILMN_1779095	0002940767	S	926	AGCAGCTCACCCAGGAGCTAGACACCCTCCGCAACCTCTTCCGCCAGATT	14	-	23586740-23586789	14q11.2f	Homo sapiens CCAAT/enhancer binding protein (C/EBP), epsilon (CEBPE), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	C/EBP-epsilon; CRP1	C/EBP-epsilon; CRP1
Homo sapiens	RefSeq	NM_178540.3	ILMN_26117	C1QTNF9	NM_178540.3	NM_178540.3		338872	65301114	NM_178540.3	C1QTNF9	NP_848635.2	ILMN_1684558	0001170167	S	1458	GCTTTAAGCTGGTGATGCTGTCATACTCCAGAAAGCTGTAGACACTGCTC	13	+	23794301-23794350	13q12.12b	Homo sapiens C1q and tumor necrosis factor related protein 9 (C1QTNF9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC48915	MGC48915
Homo sapiens	Unigene	Hs.255208	ILMN_83588	HS.255208	Hs.255208		Hs.255208		27318980	CA867431			ILMN_1872864	0004120450	S	314	CAGCTTGGCTGCCTCCTGGGATCTAACGAGAAAATGAGTCATGTGAGGTA	22	-	35930709-35930758		ir28b07.y1 HR85 islet Homo sapiens cDNA clone IMAGE:6546565 5, mRNA sequence					
Homo sapiens	RefSeq	XR_037063.1	ILMN_341156	LOC100131460	XR_037063.1	XR_037063.1		100131460	169172054	XR_037063.1	LOC100131460		ILMN_3283114	0005890670	M	1578	CACACCCTCCTGCGATGGGGTTCCTAAGAGCCAGAGGGGGAAGAGGGACT					PREDICTED: Homo sapiens misc_RNA (LOC100131460), miscRNA.					
Homo sapiens	RefSeq	XM_944664.1	ILMN_43038	LOC651429	XM_944664.1	XM_944664.1		651429	89037853	XM_944664.1	LOC651429	XP_949757.1	ILMN_1657273	0006380435	S	210	TATGGCCCTCTGACCTTGGACTTCTCAGCCTCCGTGACTAATGAAGACGG					PREDICTED: Homo sapiens hypothetical protein LOC651429 (LOC651429), mRNA.					
Homo sapiens	RefSeq	NM_031904.2	ILMN_3387	FKSG44	NM_031904.2	NM_031904.2		83786	31982912	NM_031904.2	FKSG44	NP_114110.1	ILMN_2157932	0006590543	S	3199	AGTGGCGCATCTCGGCTCACTGCAACCTCTGTCTCAAGCGATTCTCCTGC	11	+	64937101-64937150	11q13.1c	Homo sapiens FKSG44 gene (FKSG44), mRNA.				MGC31785; FLJ32216	MGC31785; FLJ32216
Homo sapiens	RefSeq	NM_080735.1	ILMN_9194	WFDC2	NM_080735.1	NM_080735.1		10406	18379359	NM_080735.1	WFDC2	NP_542773.1	ILMN_1799120	0004490360	I	28	ATGCTGCAGGTACAAGTTAATCTCCCTGTATCGCCTCTGCCCACTTACCC	20	+	43541926-43541975	20q13.12b	Homo sapiens WAP four-disulfide core domain 2 (WFDC2), transcript variant 5, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1686187] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1686187] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 1686187] [evidence TAS]	Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	dJ461P17.6; WAP5; MGC57529; HE4	dJ461P17.6; WAP5; MGC57529; HE4
Homo sapiens	RefSeq	NM_198850.3	ILMN_2897	PHLDB3	NM_198850.3	NM_198850.3		653583	157266263	NM_198850.3	PHLDB3	NP_942147.3	ILMN_3307944	0004760093	S	2248	CTAGGCCCCGCCCACTGCCGGAAAACTTGGACGCACCGCTTTGGAACTCT	19	-	48671286-48671335	19q13.31a	Homo sapiens pleckstrin homology-like domain, family B, member 3 (PHLDB3), mRNA.				MGC87511; FLJ40193	FLJ40193
Homo sapiens	RefSeq	NM_006300.2	ILMN_9855	ZNF230	NM_006300.3	NM_006300.3		7773	110624766	NM_006300.3	ZNF230	NP_006291.2	ILMN_1757825	0000270187	S	3064	CCCTGTTGCACTTGGCTGCTGGCTTCCCCTCATCCTCTGTTCTGAAGTTT	19	+	44517004-44517053	19q13.31b	Homo sapiens zinc finger protein 230 (ZNF230), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FDZF2	FDZF2
Homo sapiens	RefSeq	NM_080684.1	ILMN_10610	PTPN13	NM_080684.1	NM_080684.1		5783	18375647	NM_080684.1	PTPN13	NP_542415.1	ILMN_2374687	0001580520	A	6575	CCAGAGAGGTGCGCCATATTTCTCATCTGAATTTCACTGCCTGGCCAGAC	4	+	87949947-87949996	4q21.3c-q21.3d	Homo sapiens protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) (PTPN13), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 7929060] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 7536343] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17657516] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10918185] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17657516] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PTP1E; PNP1; PTP-BL; PTP-BAS; FAP-1; DKFZp686J1497; PTPL1; PTPLE	PTP1E; PNP1; PTP-BL; PTP-BAS; FAP-1; DKFZp686J1497; PTPL1; PTPLE
Homo sapiens	RefSeq	NM_080684.1	ILMN_10610	PTPN13	NM_080684.1	NM_080684.1		5783	18375647	NM_080684.1	PTPN13	NP_542415.1	ILMN_2374683	0003060609	A	6891	CCTGACACGTCTTCAAGCAGAAGAAGAGCAAAAACAGCAGCCTCAGCTTC	4	+	87954671-87954720	4q21.3c-q21.3d	Homo sapiens protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) (PTPN13), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 7929060] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 7536343] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17657516] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10918185] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17657516] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PTP1E; PNP1; PTP-BL; PTP-BAS; FAP-1; DKFZp686J1497; PTPL1; PTPLE	PTP1E; PNP1; PTP-BL; PTP-BAS; FAP-1; DKFZp686J1497; PTPL1; PTPLE
Homo sapiens	RefSeq	NM_005821.3	ILMN_1966	NBR2	NM_005821.3	NM_005821.3		10230	63252920	NM_005821.3	NBR2	NP_005812.1	ILMN_1666169	0005900204	S	1117	GAGGAGTGGCAGCGGCCAGGCAGCCCAGCTTCGCGAAGGCTGTAGGCACA	17	+	38550405-38550454	17q21.31a	Homo sapiens neighbor of BRCA1 gene 2 (NBR2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_000906.2	ILMN_20943	NPR1	NM_000906.2	NM_000906.2		4881	40254425	NM_000906.2	NPR1	NP_000897.2	ILMN_1779897	0000990433	S	4027	CCTGAAGGGGAACATGAAAAGAGACTAGGTGAAGAGAGGGCAGGGGAGCC	1	+	151932883-151932932	1q21.3d	Homo sapiens natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A) (NPR1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 12547834] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 12547834] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 12727915] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 14737067] [evidence TAS]; The process of renal water excretion [goid 30146] [pmid 14737067] [evidence TAS]; The process of renal sodium excretion [goid 30147] [pmid 14960748] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 12727915] [evidence NAS]; Any process that modulates the frequency, rate or extent of increases in the diameter of blood vessels [goid 42312] [pmid 7601467] [evidence NAS]; Any process that modulates the extent to which blood vessels can be pervaded by fluid [goid 43114] [pmid 14737067] [evidence TAS]	Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [pmid 12547834] [evidence NAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any hormone, naturally occurring substances secreted by specialized cells that affect the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42562] [pmid 12547834] [evidence IPI]	ANPa; GUC2A; GUCY2A; ANPRA; NPRA	ANPa; GUC2A; GUCY2A; ANPRA; NPRA
Homo sapiens	RefSeq	NM_012375.1	ILMN_182866	OR52A1	NM_012375.2	NM_012375.2		23538	116642872	NM_012375.2	OR52A1	NP_036507.2	ILMN_1750153	0006350689	S	852	GCTGGTCCCTCCATTTCTCAATCCACTTGTCTATGGTGCAAAGACCACAC	11	-	5172698-5172747	11p15.4c	Homo sapiens olfactory receptor, family 52, subfamily A, member 1 (OR52A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10512676] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10512676] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 10512676] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	HPFH1OR	HPFH1OR
Homo sapiens	RefSeq	NM_004827.2	ILMN_165667	ABCG2	NM_004827.2	NM_004827.2		9429	62526032	NM_004827.2	ABCG2	NP_004818.2	ILMN_1789641	0007160220	S	4048	GCCCTGACACTGGTCATCTTGGAATTCATTTAGTTTGTCAGTGGGTGCCC	4	-	89230773-89230822	4q22.1b	Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 2 (ABCG2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9850061] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9850061] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 9861027] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9861027] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9850061] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18056989] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9850061] [evidence TAS]; Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out) [goid 8559] [pmid 9861027] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16870176] [evidence IDA]	BCRP; CD338; BMDP; BCRP1; MXR; ABC15; ABCP; EST157481; MGC102821; MXR1; MRX; CDw338	BCRP; BMDP; BCRP1; MXR; ABC15; ABCP; EST157481; MGC102821; MXR1; MRX; CDw338
Homo sapiens	RefSeq	NM_002118.3	ILMN_2252	HLA-DMB	NM_002118.3	NM_002118.3		3109	18641376	NM_002118.3	HLA-DMB	NP_002109.1	ILMN_1761733	0004900731	S	1288	CTCCTGGGGCTCTCAGTGTGCCATAGAGGACAGCAACTGGTGATTGTTTC	6	-	33010413-33010462	6p21.32a	Homo sapiens major histocompatibility complex, class II, DM beta (HLA-DMB), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		D6S221E; RING7	D6S221E; RING7
Homo sapiens	RefSeq	XM_117451.5	ILMN_34968	LOC402617	XM_117451.5	XM_117451.5		402617	89025521	XM_117451.5	LOC402617	XP_117451.1	ILMN_1708542	0007550736	A	1506	GTGTGGCCATGTATGATGGGTAGTACGCAGTGCACACCTCTCTGACACGC	7	-	142786571-142786620		PREDICTED: Homo sapiens hypothetical LOC402617 (LOC402617), mRNA.					
Homo sapiens	RefSeq	NM_015147.1	ILMN_8720	CEP68	NM_015147.1	NM_015147.1		23177	13124755	NM_015147.1	CEP68	NP_055962.1	ILMN_1808500	0001110039	S	1813	ATGTCCTTGGGAGGATCGCAAAGCAGTCTGGTGAGCTGGAGAGCCACGCA	2	+	65163183-65163232	2p14c	Homo sapiens centrosomal protein 68kDa (CEP68), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]			FLJ25920; KIAA0582	FLJ25920; KIAA0582
Homo sapiens	RefSeq	NR_030398.1	ILMN_388256	MIR421	NR_030398.1	NR_030398.1		693122	262206328	NR_030398.1	MIR421		ILMN_3310795	0002690440	S	33	TGAAAAAATGAATCATCAACAGACATTAATTGGGCGCCTGCTCTGTGATC				Xq13.2c	Homo sapiens microRNA 421 (MIR421), microRNA.					
Homo sapiens	RefSeq	NM_024591.3	ILMN_168059	CHMP6	XM_001132548.1	XM_001132548.1		79643	113427648	XM_001132548.1	CHMP6	XP_001132548.1	ILMN_1731609	0004480592	A	1574	TTGGTTATGAGACGATCTCGCTGGGACCGCCCCTGCCCGTGGAAAGCCAC				17q25.3f	PREDICTED: Homo sapiens chromatin modifying protein 6 (CHMP6), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		VPS20; FLJ11749
Homo sapiens	RefSeq	NM_138795.2	ILMN_171438	ARL8A	NM_138795.2	NM_138795.2		127829	38679903	NM_138795.2	ARL8A	NP_620150.1	ILMN_1659148	0001190768	S	2084	TAGAGGCAGCAAGGGGACAGGGCTGGGTGCTGTTGTGTGCGAACTGAGCT	1	-	202102188-202102237	1q32.1c	Homo sapiens ADP-ribosylation factor-like 8A (ARL8A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15331635] [evidence IDA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 15331635] [evidence IDA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]; The area in the center of the spindle where the spindle microtubules from opposite poles overlap [goid 51233] [pmid 15331635] [evidence IDA]	The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 14871887] [evidence ISS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 15331635] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 15331635] [evidence IDA]; Interacting selectively with the microtubule constituent protein alpha-tubulin [goid 43014] [pmid 15331635] [evidence ISS]; Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [pmid 15331635] [evidence ISS]	ARL10B; GIE2; FLJ45195	ARL10B; GIE2; FLJ45195
Homo sapiens	RefSeq	NM_207303.1	ILMN_24066	ATRNL1	NM_207303.2	NM_207303.2		26033	109715850	NM_207303.2	ATRNL1	NP_997186.1	ILMN_1786966	0006660253	S	7687	GGGACCTTGATGCAGCGTAGCTGGTATTAACAACCGTGGGGACACCAGGC	10	+	117218768-117218817	10q25.3a-q25.3b	Homo sapiens attractin-like 1 (ATRNL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	bA338L11.1; bA454H24.1; KIAA0534; FLJ45344; ALP	RP11-537G20.1; bA338L11.1; bA454H24.1; KIAA0534; FLJ45344; ALP
Homo sapiens	RefSeq	NM_145241.2	ILMN_11741	WDR31	NM_145241.2	NM_145241.2		114987	59938778	NM_145241.2	WDR31	NP_660284.1	ILMN_2387175	0000510605	A	1951	GGCGGTACCCTTCTAGCCCAGTGCTGCTGAGCTTGTGTGAAAATCAGACC	9	-	116078381-116078430	9q32c	Homo sapiens WD repeat domain 31 (WDR31), transcript variant 3, mRNA.				FLJ35921	FLJ35921
Homo sapiens	RefSeq	NM_145241.2	ILMN_11741	WDR31	NM_145241.2	NM_145241.2		114987	59938778	NM_145241.2	WDR31	NP_660284.1	ILMN_2387180	0001010711	A	1802	GGGAAAGAATAGTGCAGCTCCATAGAGGAGACGGACTGTAGACAATGAGA	9	-	116078530-116078579	9q32c	Homo sapiens WD repeat domain 31 (WDR31), transcript variant 3, mRNA.				FLJ35921	FLJ35921
Homo sapiens	RefSeq	XR_017343.2	ILMN_176033	LOC646909	XR_017343.2	XR_017343.2		646909	169172714	XR_017343.2	LOC646909		ILMN_3279935	0003990162	M	67	CGTGTTCTCTTTAAGAACACTCGTGAAACTGCCCAGGCCATCAAGGGTAT	8	+	29545592-29545641	8p21.1a	PREDICTED: Homo sapiens misc_RNA (LOC646909), miscRNA.					
Homo sapiens	RefSeq	NM_001260.1	ILMN_27936	CDK8	NM_001260.1	NM_001260.1		1024	4502744	NM_001260.1	CDK8	NP_001251.1	ILMN_1777913	0004280520	S	1426	CATCGGAATCTTGTCCATGCACTGTTGCGAATGCTGCAGGGCTGACTGTG	13	+	25876226-25876275	13q12.13b	Homo sapiens cyclin-dependent kinase 8 (CDK8), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 14638676] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16109376] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7568034] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	K35; MGC126075; MGC126074	K35; MGC126075; MGC126074
Homo sapiens	RefSeq	NM_198201.1	ILMN_13210	POP5	NM_198201.1	NM_198201.1		51367	38016925	NM_198201.1	POP5	NP_937844.1	ILMN_1814483	0006550484	I	260	CGCCGGAGGAAGAAAGAAGGGGCACGAGTGGCCAAGCCCGTGCACCGTTT	12	-	119503189-119503238	12q24.31a	Homo sapiens processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae) (POP5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15096576] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]	HSPC004; RPP20; RPP2	HSPC004; RPP20; RPP2
Homo sapiens	RefSeq	NM_023008.2	ILMN_167927	FLJ12949	NM_023008.2	NM_023008.2		65095	30410782	NM_023008.2	FLJ12949	NP_075384.2	ILMN_2347748	0005090747	A	2531	GCTGTGGGTAAGGAAGTCGTCCCATTTTATGGATGTGGAAACTGAGGCTG	19	-	10525185-10525234	19p13.2b	Homo sapiens hypothetical protein FLJ12949 (FLJ12949), transcript variant 1, mRNA.					
Homo sapiens	Unigene	Hs.572889	ILMN_125070	HS.572889	Hs.572889		Hs.572889		78293170	DA236664			ILMN_1822442	0002810066	S	443	AGTTGCCAGGGGCTAAGGAGGGGTTTGGGACAGTGGGAAGTGAGTGTTCC					DA236664 BRAWH3 Homo sapiens cDNA clone BRAWH3033381 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001854.2	ILMN_3994	COL11A1	NM_001854.2	NM_001854.2		1301	18375517	NM_001854.2	COL11A1	NP_001845.2	ILMN_1731446	0001450735	I	1133	AGTATGGGGAAGCAGAGTATAAAGAGGCTGAAAGTGTAACAGAGGGACCC	1	-	103264392-103264441	1p21.1d-p21.1c	Homo sapiens collagen, type XI, alpha 1 (COL11A1), transcript variant A, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen heterotrimer containing type XI alpha chains in alpha1(XI)alpha2(XI)alpha3(XI) trimers; type XI collagen triple helices associate to form fibrils [goid 5592] [pmid 3182841] [evidence TAS]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [pmid 3182841] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 8872475] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [pmid 10486316] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 10486316] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 10486316] [evidence NAS]	CO11A1; COLL6; STL2	CO11A1; COLL6; STL2
Homo sapiens	RefSeq	NM_207483.1	ILMN_3733	FLJ45964	NM_207483.1	NM_207483.1		401040	46409591	NM_207483.1	FLJ45964	NP_997366.1	ILMN_2131528	0006020673	S	3377	GCACCTGGTTGTGAGTCCAGGAGAGTAAAACATTTAGCCCTCGCCCCTCC	2	+	240172402-240172451	2q37.3d	Homo sapiens FLJ45964 protein (FLJ45964), mRNA.					
Homo sapiens	RefSeq	NM_001009562.4	ILMN_22075	LST-3TM12	NM_001009562.4	NM_001009562.4		338821	116812592	NM_001009562.4	LST-3TM12	NP_001009562.3	ILMN_2050959	0004230142	S	1492	GCTTTCCTCTGTGCAGTTGGACTTACCTCATATTCCGTGCTGGTGATTAG	12	+	21098788-21098837	12p12.2a	Homo sapiens organic anion transporter LST-3b (LST-3TM12), mRNA.				LST3	LST3
Homo sapiens	RefSeq	NM_005992.1	ILMN_1516	TBX1	NM_005992.1	NM_005992.1		6899	5174710	NM_005992.1	TBX1	NP_005983.1	ILMN_2350514	0004880730	A	945	GGTCACTGCCTACCAGAACCATCGGATCACGCAGCTCAAGATTGCCAGCA	22	+	18132612-18132636:18133281-18133305	22q11.21c	Homo sapiens T-box 1 (TBX1), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15703190] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9268629] [evidence NAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [pmid 14585638] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [pmid 14585638] [evidence IMP]; The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate [goid 60023] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [pmid 14585638] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11111039] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9268629] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11111039] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 11111039] [evidence IDA]	CTHM; VCFS; TGA; TBX1C; DGS; DORV; CAFS; DGCR	VCFS; TGA; DORV; CTHM; TBX1C; DGS; CAFS; DGCR
Homo sapiens	RefSeq	NM_005992.1	ILMN_1516	TBX1	NM_005992.1	NM_005992.1		6899	5174710	NM_005992.1	TBX1	NP_005983.1	ILMN_2262510	0004220300	I	1172	GCTTGCTGGACGTGCTCTTGAAGCCCCCAAGTAAGAAGTCTGAGTCCCTG	22	+	18150469-18150518	22q11.21c	Homo sapiens T-box 1 (TBX1), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15703190] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9268629] [evidence NAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [pmid 14585638] [evidence IMP]; The process by which the anatomical structures of viscerocranium are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The viscerocranium is the part of the skull comprising the facial bones [goid 48703] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [pmid 14585638] [evidence IMP]; The biological process whose specific outcome is the progression of the soft palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The soft palate is the posterior portion of the palate extending from the posterior edge of the hard palate [goid 60023] [pmid 14585638] [evidence IMP]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [pmid 14585638] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11111039] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9268629] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11111039] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 11111039] [evidence IDA]	CTHM; VCFS; TGA; TBX1C; DGS; DORV; CAFS; DGCR	VCFS; TGA; DORV; CTHM; TBX1C; DGS; CAFS; DGCR
Homo sapiens	RefSeq	XR_017667.1	ILMN_178471	LOC440595	XR_017667.1	XR_017667.1		440595	113408834	XR_017667.1	LOC440595		ILMN_3218248	0002030008	A	787	CTTGTTGGCCGAGTGGAGACTGGTATTCTCAAACCTGGTATGGTGGTCAC	1	+	96685860-96685909	1p21.3c	PREDICTED: Homo sapiens misc_RNA (LOC440595), miscRNA.					
Homo sapiens	RefSeq	NM_014759.2	ILMN_18437	PHYHIP	NM_014759.2	NM_014759.2		9796	41281475	NM_014759.2	PHYHIP	NP_055574.2	ILMN_1713387	0001400343	S	2763	GAGGCTTGGGGAGAGGTGTGGAGAAGGAGAGAACATGGCCCAGGCACTTT	8	-	22133316-22133365	8p21.3a	Homo sapiens phytanoyl-CoA 2-hydroxylase interacting protein (PHYHIP), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DYRK1AP3; PAHX-AP; KIAA0273	DYRK1AP3; PAHX-AP; KIAA0273
Homo sapiens	RefSeq	XM_001720042.1	ILMN_341126	LOC652865	XM_001720042.1	XM_001720042.1		652865	169218089	XM_001720042.1	LOC652865	XP_001720094.1	ILMN_3240600	0003780014	S	119	CCTGCCAGGCTTCCAGATACACCTTCACCAAATACTTTACACGAGTCACC					PREDICTED: Homo sapiens similar to hCG2029978 (LOC652865), mRNA.					
Homo sapiens	RefSeq	NM_138576.2	ILMN_165404	BCL11B	NM_138576.2	NM_138576.2		64919	49574493	NM_138576.2	BCL11B	NP_612808.1	ILMN_1667885	0004480228	I	732	CATAGCTGCCTCCTCCCACCCTCACTCATCCGTGATCACTTCACCTCTGC	14	-	99697807-99697856	14q32.2b	Homo sapiens B-cell CLL/lymphoma 11B (zinc finger protein) (BCL11B), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	hRIT1-alpha; RIT1; CTIP2; CTIP-2	hRIT1-alpha; RIT1; CTIP2; CTIP-2
Homo sapiens	RefSeq	NM_022898.1	ILMN_165404	BCL11B	NM_138576.2	NM_138576.2		64919	49574493	NM_138576.2	BCL11B	NP_612808.1	ILMN_1665761	0001030296	A	7349	GGAACACAGGCAAACCCGTGATTTTGGTGCTCCTTGTAACTCAGCCCTGC	14	-	99636041-99636090	14q32.2b	Homo sapiens B-cell CLL/lymphoma 11B (zinc finger protein) (BCL11B), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	hRIT1-alpha; RIT1; CTIP2; CTIP-2	hRIT1-alpha; RIT1; CTIP2; CTIP-2
Homo sapiens	RefSeq	XR_017319.2	ILMN_176278	LOC391135	XR_017319.2	XR_017319.2		391135	169162700	XR_017319.2	LOC391135		ILMN_3282570	0001580600	M	611	GCAAGGGCAAAATGAGAAACCGTCATTGTATCCAGTGCACAGGCCCCTAC	1	-	169919575-169919624	1q24.3b	PREDICTED: Homo sapiens misc_RNA (LOC391135), miscRNA.					
Homo sapiens	RefSeq	XR_038070.1	ILMN_337731	LOC100133033	XR_038070.1	XR_038070.1		100133033	169184353	XR_038070.1	LOC100133033		ILMN_3238012	0005820274	S	412	GCCTGCACGGAAGAGATGCCTCCTCAATTAAATGCTGTTCTCCATGACCG	9	-	44184751-44184775:44185500-44185524	9p11.2c	PREDICTED: Homo sapiens misc_RNA (LOC100133033), miscRNA.					
Homo sapiens	RefSeq	NR_029865.1	ILMN_388186	MIR372	NR_029865.1	NR_029865.1		442917	262206217	NR_029865.1	MIR372		ILMN_3309438	0005820253	S	3	GGCCTCAAATGTGGAGCACTATTCTGATGTCCAAGTGGAAAGTGCTGCGA				19q13.41b	Homo sapiens microRNA 372 (MIR372), microRNA.					
Homo sapiens	RefSeq	NM_130469.2	ILMN_7648	JDP2	NM_130469.2	NM_130469.2		122953	31982907	NM_130469.2	JDP2	NP_569736.1	ILMN_1747205	0001410543	S	1608	GCCAGGGCGGGGGCGGGGTGCATTTCCATCCTTGTAAACCCTTCATAGTA	14	+	75006821-75006870	14q24.3b	Homo sapiens Jun dimerization protein 2 (JDP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	JUNDM2	JUNDM2
Homo sapiens	Unigene	Hs.408168	ILMN_90068	HS.408168	Hs.408168		Hs.408168		27845323	BX102511			ILMN_1880864	0004250176	S	639	ACCCAGCTCTGCCATGCCGCAGATAGCCGCAGTGCCAACCCTGTTTAGAT	4	+	54665231-54665280		BX102511 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998M074123, mRNA sequence					
Homo sapiens	RefSeq	NM_005879.2	ILMN_172057	TRAIP	NM_005879.2	NM_005879.2		10293	40807468	NM_005879.2	TRAIP	NP_005870.2	ILMN_1715540	0007380347	S	1609	TCGGGACCAGCCTGAGGTGTAAGGGCAGACAAACAGGTGAGGGTGAGTGT	3	-	49866597-49866646	3p21.31c	Homo sapiens TRAF interacting protein (TRAIP), mRNA.				TRIP; RNF206	TRIP; RNF206
Homo sapiens	RefSeq	NM_133173.2	ILMN_14486	APBB3	NM_133173.2	NM_133173.2		10307	95147539	NM_133173.2	APBB3	NP_573419.2	ILMN_2320513	0007320402	A	1975	TTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTCC	5	-	139937965-139938014	5q31.3b	Homo sapiens amyloid beta (A4) precursor protein-binding, family B, member 3 (APBB3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10081969] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10081969] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC87674; SRA; MGC150555; FE65L2	MGC87674; SRA; MGC150555; FE65L2
Homo sapiens	RefSeq	NM_017540.3	ILMN_8911	GALNT10	NM_017540.3	NM_017540.3		55568	38788170	NM_017540.3	GALNT10	NP_060010.3	ILMN_1655985	0005690056	I	267	CTGGCGGGATGGTGAACTGGAAGCAGAAACGTCATCCTCTCTCTTCCTTC	5	+	153763796-153763845	5q33.2b	Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) (GALNT10), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	GalNAcT10; FLJ00205; FLJ11715; pp-GalNAc-T10; DKFZp586H0623	GalNAcT10; FLJ00205; FLJ11715; pp-GalNAc-T10; DKFZp586H0623
Homo sapiens	RefSeq	NM_198321.2	ILMN_8911	GALNT10	NM_017540.3	NM_017540.3		55568	38788170	NM_017540.3	GALNT10	NP_060010.3	ILMN_1681984	0003610202	A	4126	GTTGCTTTAAGAACAAGGCCTTTGGAGGTGGCTAAACTTGCACGCACGTG	5	+	153779768-153779817	5q33.2b	Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) (GALNT10), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	GalNAcT10; FLJ00205; FLJ11715; pp-GalNAc-T10; DKFZp586H0623	GalNAcT10; FLJ00205; FLJ11715; pp-GalNAc-T10; DKFZp586H0623
Homo sapiens	RefSeq	NM_001005217.1	ILMN_5431	FRG2	NM_001005217.1	NM_001005217.1		448831	52353319	NM_001005217.1	FRG2	NP_001005217.1	ILMN_2182262	0005340301	S	1960	ACACTATTTCATTATCTAAGTGTATTAATTGTTTGGTTGCTTTATAATTT	4	-	191182590-191182639	4q35.2d	Homo sapiens FSHD region gene 2 (FRG2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FRG2A	FRG2A
Homo sapiens	RefSeq	NM_001005217.1	ILMN_5431	FRG2	NM_001005217.1	NM_001005217.1		448831	52353319	NM_001005217.1	FRG2	NP_001005217.1	ILMN_1760475	0001400554	S	474	TGTGATGCCCACCATAGGGGACATTCCAGGGCTTGCACTGGGCACAGCAA	4	-	191184076-191184125	4q35.2d	Homo sapiens FSHD region gene 2 (FRG2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FRG2A	FRG2A
Homo sapiens	RefSeq	NM_022828.2	ILMN_23803	YTHDC2	NM_022828.2	NM_022828.2		64848	38505212	NM_022828.2	YTHDC2	NP_073739.2	ILMN_1725760	0000150605	S	5401	GTCTTCCAAACTAAAGCCTGCAAGCGCCACAATTCTAAGTGCCGCCTTCC	5	+	112915385-112915392:112916777-112916818	5q22.2b	Homo sapiens YTH domain containing 2 (YTHDC2), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]		
Homo sapiens	RefSeq	NM_017975.2	ILMN_3475	ZWILCH	NM_017975.3	NM_017975.3		55055	110578654	NM_017975.3	ZWILCH	NP_060445.3	ILMN_1806483	0000780114	A	515	TCTCTACTGGCGAAAATGTTGGACCACTTGCTTTACCAGTTGGGAAGGCA	15	+	64594985-64595034	15q22.31c	Homo sapiens Zwilch, kinetochore associated, homolog (Drosophila) (ZWILCH), transcript variant 1, mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 15824131] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12686595] [evidence IPI]	FLJ10036; FLJ16343; KNTC1AP; MGC111034; hZwilch	FLJ10036; KNTC1AP; MGC111034; hZwilch
Homo sapiens	RefSeq	NM_017975.2	ILMN_3475	ZWILCH	NM_017975.3	NM_017975.3		55055	110578654	NM_017975.3	ZWILCH	NP_060445.3	ILMN_1700378	0004850221	I	2283	GCATGTGACTTAGCAAGGGCTCTGAAATGACAAAGAGAACGAGCACCACA	15	+	64627977-64628026	15q22.31c	Homo sapiens Zwilch, kinetochore associated, homolog (Drosophila) (ZWILCH), transcript variant 1, mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 15824131] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12686595] [evidence IPI]	FLJ10036; FLJ16343; KNTC1AP; MGC111034; hZwilch	FLJ10036; KNTC1AP; MGC111034; hZwilch
Homo sapiens	RefSeq	NR_003612.1	ILMN_308043	FAM92A3	NR_003612.1	NR_003612.1		403315	153791949	NR_003612.1	FAM92A3		ILMN_3235997	0006450167	S	1700	GTTCTCTACTACAGGTGAGGGAAAGAAACCCTTGACCCTGAAAAGAAGTG	4	+	183960517-183960566	4q35.1c	Homo sapiens family with sequence similarity 92, member A3 (FAM92A3), non-coding RNA.				MGC102964; MGC71735	MGC102964; MGC71735
Homo sapiens	RefSeq	NR_024337.1	ILMN_370905	C1ORF133	NR_024337.1	NR_024337.1		574036	210147584	NR_024337.1	C1orf133		ILMN_3241665	0001090653	S	481	CGAGGAGTGATCCTCCGACTGTGAAAAACCAGACCTCTGGCTGCCTGGCT	1	-	210405073-210405116:210406980-210406985	1q32.2c	Homo sapiens chromosome 1 open reading frame 133 (C1orf133), non-coding RNA. XM_001720763					
Homo sapiens	RefSeq	NR_003573.1	ILMN_308051	ANXA2P2	NR_003573.1	NR_003573.1		304	148833516	NR_003573.1	ANXA2P2		ILMN_3235632	0004890494	S	1248	ATCATGCCACTGCACTCCAGCCTGGGCAACAGAGCTAGACTCTGTCTCTA	9	+	33615470-33615519	9p13.3d	Homo sapiens annexin A2 pseudogene 2 (ANXA2P2), non-coding RNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]		Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	ANX2L2; LPC2B; ANX2P2	ANX2P2; ANX2L2; LPC2B
Homo sapiens	RefSeq	NM_198458.1	ILMN_1852	ZNF497	NM_198458.1	NM_198458.1		162968	38348235	NM_198458.1	ZNF497	NP_940860.1	ILMN_1791519	0000540102	S	3098	TCTCCCCCAGTCCACCCAGAACACACAGCCTCCATCCAGGTATTGGCTCT	19	-	63557855-63557904	19q13.43c	Homo sapiens zinc finger protein 497 (ZNF497), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ44773	FLJ44773
Homo sapiens	Unigene	Hs.204736	ILMN_81872	HS.204736	Hs.204736		Hs.204736		81098302	DA570923			ILMN_1824554	0002760379	S	404	GCTCTGTTCAACCAAATCCCATTATTGTCAGGAGAGGCTCTGGCAGACTT	8	+	32271745-32271794		DA570923 HEMBA1 Homo sapiens cDNA clone HEMBA1005696 5, mRNA sequence					
Homo sapiens	RefSeq	XM_930357.1	ILMN_39561	LOC653555	XM_930357.1	XM_930357.1		653555	89037324	XM_930357.1	LOC653555	XP_935450.1	ILMN_1656998	0001470129	S	181	CACCAATACCGAGGTGCTCAAGAACATGGGCTCTGCAGCCAAGGCCAAGA	14	+	54835378-54835427		PREDICTED: Homo sapiens similar to Charged multivesicular body protein 4b (Chromatin modifying protein 4b) (CHMP4b) (LOC653555), mRNA.					
Homo sapiens	RefSeq	XM_946031.1	ILMN_41823	LOC644852	XM_946032.2	XM_946032.2		644852	113412751	XM_946032.2	LOC644852	XP_951125.1	ILMN_1706232	0006200136	A	2136	TCATGCATTTTCACCTTTTGACATTTCTGAAGTAGGAATATTTTAAGATG				1q44e	PREDICTED: Homo sapiens hypothetical LOC644852, transcript variant 2 (LOC644852), mRNA.					
Homo sapiens	RefSeq	NM_018480.2	ILMN_18826	TMEM126B	NM_018480.2	NM_018480.2		55863	32189381	NM_018480.2	TMEM126B	NP_060950.2	ILMN_2145518	0002750600	S	1036	ACACGTAAGATACAGGTCTTATCTCCTGATGGTGTGTCCATTTTGCCTGG	11	+	85025102-85025151	11q14.1e	Homo sapiens transmembrane protein 126B (TMEM126B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HT007; MGC111203	HT007; MGC111203
Homo sapiens	RefSeq	NM_018480.2	ILMN_18826	TMEM126B	NM_018480.2	NM_018480.2		55863	32189381	NM_018480.2	TMEM126B	NP_060950.2	ILMN_1766851	0006100324	S	658	CGCCTGGCAACCAAGTATCATACCGTTCCACTGCCACCAAAAGGAAGGGT	11	+	85024457-85024470:85024738-85024773	11q14.1e	Homo sapiens transmembrane protein 126B (TMEM126B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HT007; MGC111203	HT007; MGC111203
Homo sapiens	RefSeq	NM_080737.1	ILMN_15836	SYTL4	NM_080737.1	NM_080737.1		94121	18152766	NM_080737.1	SYTL4	NP_542775.1	ILMN_1719599	0004540184	S	3792	AGGCATAACTTGGGATCCCGGGCTGTAACTTGCTCTTTTGTTTCCCACCC	X	-	99816187-99816236	Xq22.1b	Homo sapiens synaptotagmin-like 4 (granuphilin-a) (SYTL4), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence ISS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp451P0116; FLJ40960	FLJ40960; DKFZp451P0116
Homo sapiens	RefSeq	NM_016248.2	ILMN_13368	AKAP11	NM_016248.2	NM_016248.2		11215	21464140	NM_016248.2	AKAP11	NP_057332.1	ILMN_1693220	0006420398	I	9241	CCCTGTCCACCTGTCACCAGCACAAGAGAATTAGAGCTTCAGTGAGAATT	13	+	41794724-41794773	13q14.11c	Homo sapiens A kinase (PRKA) anchor protein 11 (AKAP11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10209101] [evidence TAS]	Interacting selectively with the enzyme protein phosphatase 1 [goid 8157] [pmid 10209101] [evidence TAS]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10209101] [evidence TAS]	PRKA11; AKAP220; DKFZp781I12161; KIAA0629; FLJ11304	AKAP220; KIAA0629; PRKA11; DKFZp781I12161; FLJ11304
Homo sapiens	RefSeq	NM_016248.2	ILMN_13368	AKAP11	NM_016248.2	NM_016248.2		11215	21464140	NM_016248.2	AKAP11	NP_057332.1	ILMN_2293758	0001450333	I	9532	TCCGGTTTTAATATTGCTGGATTTGCTACCTTTGGTTACTTGTGCAGTGT	13	+	41795015-41795064	13q14.11c	Homo sapiens A kinase (PRKA) anchor protein 11 (AKAP11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10209101] [evidence TAS]	Interacting selectively with the enzyme protein phosphatase 1 [goid 8157] [pmid 10209101] [evidence TAS]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10209101] [evidence TAS]	PRKA11; AKAP220; DKFZp781I12161; KIAA0629; FLJ11304	AKAP220; KIAA0629; PRKA11; DKFZp781I12161; FLJ11304
Homo sapiens	RefSeq	NM_144490.1	ILMN_13368	AKAP11	NM_016248.2	NM_016248.2		11215	21464140	NM_016248.2	AKAP11	NP_057332.1	ILMN_1783818	0001070484	A	3715	AGAGCTCCCAGAAGTGGATGTGAAGTCGGAGCACTCAGGGAAGAAGGTTC	13	+	41774422-41774471	13q14.11c	Homo sapiens A kinase (PRKA) anchor protein 11 (AKAP11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10209101] [evidence TAS]	Interacting selectively with the enzyme protein phosphatase 1 [goid 8157] [pmid 10209101] [evidence TAS]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10209101] [evidence TAS]	PRKA11; AKAP220; DKFZp781I12161; KIAA0629; FLJ11304	AKAP220; KIAA0629; PRKA11; DKFZp781I12161; FLJ11304
Homo sapiens	RefSeq	XM_001719321.1	ILMN_342553	ASCL5	XM_001719321.1	XM_001719321.1		647219	169162732	XM_001719321.1	ASCL5	XP_001719373.1	ILMN_3261705	0003940181	M	1133	TTGGGGCGGAAGTGCAGGGCAGCGGGTACGATGGGCACGATAGAGACCTA	1	-	199350289-199350338	1q32.1b	PREDICTED: Homo sapiens achaete-scute complex homolog 5 (Drosophila) (ASCL5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	XM_001719321.1	ILMN_342553	ASCL5	XM_001719321.1	XM_001719321.1		647219	169162732	XM_001719321.1	ASCL5	XP_001719373.1	ILMN_3185242	0000770521	A	598	TTCATCCAGAAGCGCAACGAGCGCGAGAGGCAGCGAGTCAAGTGCGTCAA	1	-	199350824-199350873	1q32.1b	PREDICTED: Homo sapiens achaete-scute complex homolog 5 (Drosophila) (ASCL5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	NM_181644.2	ILMN_19137	MFSD4	NM_181644.3	NM_181644.3		148808	141802338	NM_181644.3	MFSD4	NP_857595.2	ILMN_1729734	0007050315	S	2473	GGGAGTATTACCATGGACACTGGCAAAAGCTACAGATCCCGGAGAGCCAG	1	+	203837104-203837153	1q32.1g	Homo sapiens major facilitator superfamily domain containing 4 (MFSD4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		DKFZp761N1114; UNQ3064; FLJ34577; FLJ25004	DKFZp761N1114; UNQ3064; FLJ34577; FLJ25004
Homo sapiens	RefSeq	XM_930313.1	ILMN_19137	MFSD4	NM_181644.3	NM_181644.3		148808	141802338	NM_181644.3	MFSD4	NP_857595.2	ILMN_1667037	0006960561	S	3165	GTGATACAAGGAGAATGTAAACTTGCCAGCTTAGACAGGGATCAGTCCTG	1	+	203837796-203837845	1q32.1g	Homo sapiens major facilitator superfamily domain containing 4 (MFSD4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		DKFZp761N1114; UNQ3064; FLJ34577; FLJ25004	
Homo sapiens	RefSeq	NM_000042.1	ILMN_10010	APOH	NM_000042.2	NM_000042.2		350	153266840	NM_000042.2	APOH	NP_000033.2	ILMN_1761511	0001740669	S	777	CTGGATGGCCCGGAAGAAATAGAATGTACCAAACTGGGAAACTGGTCTGC	17	-	64212922-64212971	17q24.2a	Homo sapiens apolipoprotein H (beta-2-glycoprotein I) (APOH), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 16480936] [evidence IDA]; A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver [goid 34361] [pmid 222615] [evidence IDA]; A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process [goid 34364] [pmid 222615] [evidence IDA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [pmid 222615] [evidence IDA]	Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [pmid 17872974] [evidence IDA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [pmid 7417307] [evidence IDA]; A pathway of blood coagulation that occurs during the clotting of platelet-poor plasma, in which activation of factor X to factor Xa is effected by the combination of factor IXa + factor VIIIa + calcium ion + phospholipid [goid 7597] [pmid 4052628] [evidence IDA]; Any process that decreases the rate, frequency, or extent of the orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 10596] [pmid 17872974] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 17872974] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of blood coagulation [goid 30194] [pmid 16480936] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of blood coagulation [goid 30195] [pmid 4052628] [evidence IDA]; The process whereby plasminogen is processed to plasmin. This process includes both the cleavage of plasminogen between Arg560-Val561 to form plasmin and cleavage at Arg310 by plasmin or trypsin to result in the final two-chain form of plasmin held together by disulfide bonds [goid 31639] [pmid 16480936] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptosis [goid 33033] [pmid 15534879] [evidence IDA]; The directed movement of triacylglycerol into, out of, within or between cells. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 34197] [pmid 7078428] [evidence ISS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of smooth muscle cell apoptosis [goid 34392] [pmid 15534879] [evidence IDA]; Any process that activates or increases the activity of the enzyme lipoprotein lipase [goid 51006] [pmid 7417307] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots [goid 51918] [pmid 14726399] [evidence IDA]	Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [pmid 9269765] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 15486070] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [pmid 16480936] [evidence IDA]; Increases the activity of a lipoprotein lipase, an enzyme that catalyzes of the hydrolysis of a lipid within a lipoprotein [goid 60230] [pmid 7417307] [evidence IDA]	BG; B2G1	BG; B2G1
Homo sapiens	RefSeq	XM_925839.1	ILMN_38075	LOC158301	XM_925839.1	XM_925839.1		158301	89030009	XM_925839.1	LOC158301	XP_930932.1	ILMN_1767263	0000780717	A	2068	CCACCCCTGCAGTCTCAGCTGTTTGGGAGGCTGAAGCAAGAGGCTAGCTT	9	+	132447529-132447578	9q34.11e	PREDICTED: Homo sapiens hypothetical protein LOC158301 (LOC158301), mRNA.					
Homo sapiens	RefSeq	XM_932154.1	ILMN_41304	LOC644373	XM_932154.1	XM_932154.1		644373	88943008	XM_932154.1	LOC644373	XP_937247.1	ILMN_1701857	0003360315	S	71	CCTGTGGAAGAGTGAAAGCAATAGGATTGGGTGGAGCAGGAAGTCGGCTG	1	-	141529635-141529684		PREDICTED: Homo sapiens hypothetical protein LOC644373 (LOC644373), mRNA.					
Homo sapiens	RefSeq	XM_001720547.1	ILMN_337928	LOC257054	XM_001720547.1	XM_001720547.1		257054	169162941	XM_001720547.1	LOC257054	XP_001720599.1	ILMN_3238143	0001740246	S	234	GCGTGGCTGTTGCGGGGTGCTCCGGGAGCCGCGGGTTCTTGGGGTCGGCC	2	+	151800-151849		PREDICTED: Homo sapiens similar to D-2-hydroxyglutarate dehydrogenase (LOC257054), mRNA.					
Homo sapiens	RefSeq	XM_944096.1	ILMN_39106	LOC648432	XM_944096.1	XM_944096.1		648432	88999285	XM_944096.1	LOC648432	XP_949189.1	ILMN_1723574	0000780521	A	3757	CCAGTCTAGGCAAGAATGCCAAGTGTAAGAGGAAGGCTCAGAAACCACAG					PREDICTED: Homo sapiens hypothetical protein LOC648432, transcript variant 1 (LOC648432), mRNA.					
Homo sapiens	RefSeq	XM_940263.1	ILMN_36292	LOC651133	XM_940263.1	XM_940263.1		651133	88981337	XM_940263.1	LOC651133	XP_945356.1	ILMN_1728479	0006290408	S	3	GGAGGGTCAGGCCCCCGGCTGCTGTGGGGAAAAGAAGTATTCTCCATTAT					PREDICTED: Homo sapiens hypothetical protein LOC651133 (LOC651133), mRNA.					
Homo sapiens	RefSeq	XM_934321.1	ILMN_34852	LOC647080	XM_934321.1	XM_934321.1		647080	89036716	XM_934321.1	LOC647080	XP_939414.1	ILMN_1697557	0003830037	S	189	CTCCTCGGAAATCGCAGCCCAACCTTACCCCAGGCCCGGGTTCCAGGAGC	13	+	44890338-44890387		PREDICTED: Homo sapiens hypothetical protein LOC647080 (LOC647080), mRNA.					
Homo sapiens	RefSeq	XM_931913.1	ILMN_43659	LOC643913	XM_931913.1	XM_931913.1		643913	88952981	XM_931913.1	LOC643913	XP_937006.1	ILMN_1678568	0006960348	S	647	TGCCATCTCCACGGCCCCGGGGGACAGAAGGAAACAGACACCGACCACTT	2	-	5753871-5753915:5754046-5754050		PREDICTED: Homo sapiens hypothetical protein LOC643913 (LOC643913), mRNA.					
Homo sapiens	RefSeq	XM_001721904.1	ILMN_343745	LOC100132453	XM_001721904.1	XM_001721904.1		100132453	169208398	XM_001721904.1	LOC100132453	XP_001721956.1	ILMN_3242673	0003400021	S	12	CAACGCCTCCACGAGTGTCTTCTTGTTCCCACGCGAGTGCAGGTTGGACA	15	-	100118880-100118929	15q26.3d	PREDICTED: Homo sapiens hypothetical protein LOC100132453 (LOC100132453), mRNA.					
Homo sapiens	RefSeq	NR_027070.1	ILMN_387292	PISRT1	NR_027070.1	NR_027070.1		140464	224465196	NR_027070.1	PISRT1		ILMN_3309709	0006660678	S	305	GAAATTCACAGCACGGTGAAGTGGCCCAAGGTAAGGCAGCCAGGATTTAA	3	-	138952010-138952059		Homo sapiens polled intersex syndrome regulated transcript 1 (non-protein coding RNA) (PISRT1), non-coding RNA.					
Homo sapiens	RefSeq	NM_021020.1	ILMN_3351	LZTS1	NM_021020.1	NM_021020.1		11178	10440565	NM_021020.1	LZTS1	NP_066300.1	ILMN_1677261	0003520735	S	5195	GGGCTGCTCACCCACCTCTTGTGCAAGGTGGCCTTTGTGCTGCGCCTGCA	8	-	20148170-20148219	8p21.3c	Homo sapiens leucine zipper, putative tumor suppressor 1 (LZTS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 10097140] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10097140] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17349584] [evidence IPI]	FEZ1; F37	FEZ1; F37
Homo sapiens	RefSeq	XR_041247.1	ILMN_339142	LOC653687	XR_041247.1	XR_041247.1		653687	169216680	XR_041247.1	LOC653687		ILMN_3280734	0006900131	M	741	TGCTGAAGTATGTCATCAAAAGGTACAGGAGCTTCCTCCCTGAGATTTTC	X	+	71914187-71914236	Xq13.1e	PREDICTED: Homo sapiens misc_RNA (LOC653687), miscRNA.					
Homo sapiens	Unigene	Hs.553019	ILMN_111195	HS.553019	Hs.553019		Hs.553019		14001597	BG722423			ILMN_1907292	0001410008	S	492	TTGCACAAATTTTCCTTGAGTGCCTTGTTCATGGAAGGCGCTATTCCAGG	2	-	115302576-115302625		602693628F1 NIH_MGC_97 Homo sapiens cDNA clone IMAGE:4825783 5, mRNA sequence					
Homo sapiens	RefSeq	NM_017931.2	ILMN_11243	TTC38	NM_017931.2	NM_017931.2		55020	116812607	NM_017931.2	TTC38	NP_060401.2	ILMN_2059886	0006040017	S	2415	CTCCTGTGAGGGGCGGTCCCAGTGCACAGATGTTTTTCAAGTTCCTCAGT	22	+	45068374-45068423	22q13.31d	Homo sapiens tetratricopeptide repeat domain 38 (TTC38), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_018996.2	ILMN_178206	TNRC6C	NM_018996.2	NM_018996.2		57690	33413424	NM_018996.2	TNRC6C	NP_061869.2	ILMN_2094424	0000770301	S	4914	AGTGAATCGCTTCTTAGCCCAAGGCCAGGCGCTGCCACCCACTTCCAGCT	17	+	73612212-73612261	17q25.3a	Homo sapiens trinucleotide repeat containing 6C (TNRC6C), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	KIAA1582; FLJ20015	KIAA1582; FLJ20015
Homo sapiens	RefSeq	XM_936559.1	ILMN_40241	LOC647500	XM_936559.2	XM_936559.2		647500	113412337	XM_936559.2	LOC647500	XP_941652.1	ILMN_1699382	0007400750	S	996	CAGCATCTTCACTTCCCATCTCATTCCATGTCCTGGTGGAATGGCTGCAG				1q21.1a	PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein isoform 1 (LOC647500), mRNA.					
Homo sapiens	RefSeq	XM_069734.4	ILMN_32715	LOC136143	XM_069734.5	XM_069734.5		136143	113418773	XM_069734.5	LOC136143	XP_069734.5	ILMN_1668228	0004760431	S	79	CCACCTCTGTCCCTTTCCCGGATGATCCCGAAAATGAAGCTTCCTGGCCA	7	-	120868466-120868515	7q31.31d	PREDICTED: Homo sapiens similar to ribosomal protein L18 (LOC136143), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Homo sapiens	RefSeq	NM_001042519.1	ILMN_181198	C2ORF88	NM_001042519.1	NM_001042519.1		84281	110349743	NM_001042519.1	C2orf88	NP_001035984.1	ILMN_2279484	0002480100	I	9	CCACTTGGCTGAGCCGGGCGCCGGCGAGAAGGCGGCGCCGCTGCCCTGGC	2	+	190753842-190753891	2q32.2b	Homo sapiens chromosome 2 open reading frame 88 (C2orf88), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	XM_939024.1	ILMN_33418	LOC649942	XM_939024.1	XM_939024.1		649942	89060817	XM_939024.1	LOC649942	XP_944117.1	ILMN_1668717	0004810324	S	1	ATGGTTCGAGTAGACCGTCTGAACCCCTGCATGAAACACTTCCATACCTC					PREDICTED: Homo sapiens similar to L-myc-1 proto-oncogene protein (LOC649942), mRNA.					
Homo sapiens	RefSeq	Hs.31290	ILMN_309146	LOC730092	NR_003370.1	NR_003370.1		730092	129270094	NR_003370.1	LOC730092		ILMN_1910120	0004200719	S	26360	CCAGCAGCTAGCCTACACCCACAGCTATTTTGCTTGTGTTCCACTCGTCC				16p12.1c	Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene (LOC730092) on chromosome 16.				MGC138320; MGC138322	
Homo sapiens	RefSeq	NM_145237.1	ILMN_309146	LOC730092	NR_003370.1	NR_003370.1		730092	129270094	NR_003370.1	LOC730092		ILMN_1778657	0006040296	S	23802	AGCTGGAAATTCATACCCAACAAGCCCTAGCCCTCCCACCAGACCCACAT				16p12.1c	Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene (LOC730092) on chromosome 16.				MGC138320; MGC138322	
Homo sapiens	RefSeq	NR_001283.1	ILMN_4755	TOP1P2	NR_001283.1	NR_001283.1		7152	28827817	NR_001283.1	TOP1P2		ILMN_2043109	0002230279	S	1142	CCCATCATCCTTTGTTCTGAGCATTCGCTGTACTTTAAGATACCCATCTT	22	+	23491609-23491658	22q11.23c	Homo sapiens topoisomerase (DNA) I pseudogene 2 (TOP1P2), non-coding RNA.					
Homo sapiens	Unigene	Hs.547858	ILMN_109664	HS.547858	Hs.547858		Hs.547858		13709862	BG188175			ILMN_1838702	0001820634	S	61	GTGAAGGTCATTGATGGAAGCTCCAGGAGAGAGTGGGGATAATGGAAGGA	X	+	20404574-20404623		RST7186 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_003380.2	ILMN_676	VIM	NM_003380.2	NM_003380.2		7431	62414288	NM_003380.2	VIM	NP_003371.2	ILMN_1782538	0000830593	S	1132	CAATGAGTCCCTGGAACGCCAGATGCGTGAAATGGAAGAGAACTTTGCCG	10	+	17316823-17316823:17317174-17317222	10p12.33c	Homo sapiens vimentin (VIM), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9150946] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 16130169] [evidence TAS]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 11889032] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 16130169] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins [goid 45103] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 11889032] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11827972] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11889032] [evidence IDA]	FLJ36605	FLJ36605
Homo sapiens	RefSeq	NM_003380.2	ILMN_676	VIM	NM_003380.2	NM_003380.2		7431	62414288	NM_003380.2	VIM	NP_003371.2	ILMN_2058251	0007050019	S	1370	CCAAACTTTTCCTCCCTGAACCTGAGGGAAACTAATCTGGATTCACTCCC	10	+	17317867-17317894:17318299-17318320	10p12.33c	Homo sapiens vimentin (VIM), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9150946] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 16130169] [evidence TAS]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 11889032] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 16130169] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any cellular process that depends upon or alters the intermediate filament cytoskeleton, that part of the cytoskeleton comprising intermediate filaments and their associated proteins [goid 45103] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 11889032] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11827972] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11889032] [evidence IDA]	FLJ36605	FLJ36605
Homo sapiens	RefSeq	NM_006594.1	ILMN_20264	AP4B1	NM_006594.1	NM_006594.1		10717	5729741	NM_006594.1	AP4B1	NP_006585.1	ILMN_1669377	0000510129	S	2210	CGCAATGAGTAGGGCTGGGTCTCGGCCATGGAAAGCATACCTCAGTGCTC	1	-	114239375-114239424	1p13.2b	Homo sapiens adaptor-related protein complex 4, beta 1 subunit (AP4B1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10066790] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 10066790] [evidence TAS]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10066790] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BETA-4	BETA-4
Homo sapiens	RefSeq	XM_929832.1	ILMN_307428	C8ORF59	NM_001099672.1	NM_001099672.1		401466	153791719	NM_001099672.1	C8orf59	NP_001093142.1	ILMN_1653205	0001510452	A	162	GAACAAATTAAGAGGGCCGAAGTCCAGGAATGTATTTCACATAGCCAGCC	8	-	86316922-86316971	8q21.2b	Homo sapiens chromosome 8 open reading frame 59 (C8orf59), transcript variant 3, mRNA.					
Homo sapiens	RefSeq	NM_138385.2	ILMN_23838	TMEM129	NM_138385.2	NM_138385.2		92305	52851432	NM_138385.2	TMEM129	NP_612394.1	ILMN_1663033	0001450403	S	2358	CCTGACACAGGTGTGGCTACTGGAGGGGCCTTCATACCTGCGGCCCCAAA	4	-	1687746-1687795	4p16.3b	Homo sapiens transmembrane protein 129 (TMEM129), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			D4S2561E; FLJ25600	D4S2561E; FLJ25600
Homo sapiens	RefSeq	XM_926325.1	ILMN_183449	FLJ26056	XM_001126757.1	XM_001126757.1		375127	113429258	XM_001126757.1	FLJ26056	XP_001126757.1	ILMN_1716729	0002190360	I	432	AACGCGAGGGTGGTGCAGGTGGCCCCTCTGAGGCTTGAATCTAGAGCCAT	22	-	17046826-17046833:17051390-17051423:17051889-17051896	22q11.21b	PREDICTED: Homo sapiens hypothetical protein LOC375127 (FLJ26056), mRNA.					
Homo sapiens	RefSeq	NM_153202.1	ILMN_15647	ADAM33	NM_153202.1	NM_153202.1		80332	24041039	NM_153202.1	ADAM33	NP_694882.1	ILMN_1671297	0003420025	A	3053	CCCCCATTCTGTGTGTGTCGGGGGGACAGAGGGAACCATTTAAGAAAAGA	20	-	3648958-3649007	20p13b	Homo sapiens ADAM metallopeptidase domain 33 (ADAM33), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11814695] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 11814695] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11814695] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11814695] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp434K0521; FLJ36751; MGC149823; DJ964F7.1; MGC71889; FLJ35308	DKFZp434K0521; FLJ36751; MGC149823; DJ964F7.1; MGC71889; FLJ35308
Homo sapiens	RefSeq	NM_015431.2	ILMN_169620	TRIM58	NM_015431.3	NM_015431.3		25893	112421126	NM_015431.3	TRIM58	NP_056246.3	ILMN_1705458	0005890138	S	1213	GGGAATGAGTACATGGTCCTTGCCTCCCCATCAGTGCCTCTTCTCCAACT	1	+	246106118-246106167	1q44e	Homo sapiens tripartite motif-containing 58 (TRIM58), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BIA2; DKFZp434C091	BIA2; DKFZp434C091
Homo sapiens	RefSeq	NM_001001664.1	ILMN_21364	SPOPL	NM_001001664.1	NM_001001664.1		339745	48717262	NM_001001664.1	SPOPL	NP_001001664.1	ILMN_1807649	0000610703	S	5109	GGTGGGTGAGTGGGTTCGTTTTAGTGTTCTCAGATTATAAAGACAGCTAT	2	+	139046671-139046720	2q22.1c	Homo sapiens speckle-type POZ protein-like (SPOPL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_001001664.1	ILMN_21364	SPOPL	NM_001001664.1	NM_001001664.1		339745	48717262	NM_001001664.1	SPOPL	NP_001001664.1	ILMN_2095506	0007040475	S	5301	GACTAACTCCTTACTAGGAATGAAATCACACAGTGTCTTCTGTTTGCAGT	2	+	139046863-139046912	2q22.1c	Homo sapiens speckle-type POZ protein-like (SPOPL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_001017373.2	ILMN_11976	SAMD3	NM_001017373.2	NM_001017373.2		154075	126032304	NM_001017373.2	SAMD3	NP_001017373.2	ILMN_2343618	0003610719	A	862	CCAGGCCGACATGACTAAGTATCTGGAAGGCTCACTGTACCCCAGCACCC	6	-	130547011-130547025:130547276-130547310	6q23.1a-q23.1b	Homo sapiens sterile alpha motif domain containing 3 (SAMD3), transcript variant 1, mRNA.				MGC35163; FLJ34563	MGC35163; FLJ34563
Homo sapiens	RefSeq	NM_001017373.2	ILMN_11976	SAMD3	NM_001017373.2	NM_001017373.2		154075	126032304	NM_001017373.2	SAMD3	NP_001017373.2	ILMN_2258816	0001030167	I	1702	GGTGGACGACTGTGTTACAGCCTTGGCTGCGCTAGTAGCTGCCTTTCATG	6	-	130530749-130530753:130535482-130535526	6q23.1a-q23.1b	Homo sapiens sterile alpha motif domain containing 3 (SAMD3), transcript variant 1, mRNA.				MGC35163; FLJ34563	MGC35163; FLJ34563
Homo sapiens	RefSeq	NM_022351.2	ILMN_2640	EFCBP1	NM_022351.2	NM_022351.2		64168	31377716	NM_022351.2	EFCBP1	NP_071746.1	ILMN_2218758	0007040201	S	4756	ACAGTCCATTACAGTTATTGTTGCTAGATCCACCTCATTTGCAGATGTCC	8	+	92040338-92040387	8q21.3e	Homo sapiens EF-hand calcium binding protein 1 (EFCBP1), mRNA.				STIP-1; NECAB1	STIP-1; NECAB1
Homo sapiens	RefSeq	NM_182922.1	ILMN_42573	HEATR3	NM_182922.2	NM_182922.2		55027	90819240	NM_182922.2	HEATR3	NP_891552.1	ILMN_1808219	0004850440	A	1934	CCACCAAAGATCCTTCCCTTGTGGTAGCAGGAGAAGCTTTGGATGCCCTC	16	+	48693699-48693748	16q12.1c	Homo sapiens HEAT repeat containing 3 (HEATR3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ20718	
Homo sapiens	RefSeq	NM_182922.1	ILMN_42573	HEATR3	NM_182922.2	NM_182922.2		55027	90819240	NM_182922.2	HEATR3	NP_891552.1	ILMN_1666082	0005570338	I	2316	TCTGTACATTCTGTAAAAACTTCAAAACCTGGCCAGGCATGGTGGCTCAC	16	+	48696584-48696633	16q12.1c	Homo sapiens HEAT repeat containing 3 (HEATR3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ20718	
Homo sapiens	RefSeq	XM_001722736.1	ILMN_348295	LOC729789	XM_001722736.1	XM_001722736.1		729789	169165357	XM_001722736.1	LOC729789	XP_001722788.1	ILMN_3227732	0002510528	A	334	GACCACTACCTGGGCGAGTTCTCCATCACCTACAAGCCCATAAAGCACGG				3p14.3d	PREDICTED: Homo sapiens similar to insulinoma protein (rig) (LOC729789), mRNA.					
Homo sapiens	RefSeq	NM_182533.2	ILMN_2880	C1ORF86	NM_182533.2	NM_182533.2		199990	123701941	NM_182533.2	C1orf86	NP_872339.2	ILMN_2097790	0001570564	S	508	TGGATGTTGACAGCCACCTGGCCCAGTGCTTGGCCGAAAGCACAGAAGAC	1	-	2121159-2121208	1p36.33a	Homo sapiens chromosome 1 open reading frame 86 (C1orf86), transcript variant 2, mRNA.				FP7162; RP11-181G12.3; MGC120153; FLJ31031	RP11-181G12.3; MGC120153; FLJ31031
Homo sapiens	RefSeq	NM_013451.3	ILMN_371188	MYOF	NM_013451.3	NM_013451.3		26509	215422326	NM_013451.3	MYOF	NP_038479.1	ILMN_3302919	0004670592	M	6335	GTCATCCAGCAATGAGAGAATCCTGCCTCTGTAGACCAACATCCAGTGTG	10	-	95066644-95066693	10q23.33a-q23.33b	Homo sapiens myoferlin (MYOF), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	XR_037980.1	ILMN_350530	LOC730086	XR_037980.1	XR_037980.1		730086	169166109	XR_037980.1	LOC730086		ILMN_3228977	0002850019	A	110	ATGGCCAAGAACCCAGCTATCCTGAGGCTGTGACCATCTATGACAAGCCG				3q25.31b	PREDICTED: Homo sapiens misc_RNA (LOC730086), miscRNA.					
Homo sapiens	RefSeq	NM_006317.3	ILMN_28962	BASP1	NM_006317.3	NM_006317.3		10409	30795230	NM_006317.3	BASP1	NP_006308.3	ILMN_1651826	0002140121	S	1410	CAGACAGAGCCCACTTAGCTTGTCCACATGGATCTCAATGCCAATCCTCC	5	+	17276386-17276435	5p15.1b	Homo sapiens brain abundant, membrane attached signal protein 1 (BASP1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9749536] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9749536] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]			CAP-23; NAP22; CAP23; MGC8555; NAP-22	CAP-23; NAP22; CAP23; MGC8555; NAP-22
Homo sapiens	RefSeq	NM_001010940.1	ILMN_14238	C9ORF135	NM_001010940.1	NM_001010940.1		138255	58219540	NM_001010940.1	C9orf135	NP_001010940.1	ILMN_1699537	0001990661	S	460	CTGCCACAGGTTTTGGAGCTGTCTTTCCTAGACATCCACCGGATTGGAGC	9	+	71662659-71662708	9q21.11b	Homo sapiens chromosome 9 open reading frame 135 (C9orf135), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_172311.1	ILMN_4312	STON1-GTF2A1L	NM_172311.1	NM_172311.1		286749	29553943	NM_172311.1	STON1-GTF2A1L	NP_758515.1	ILMN_1656409	0001110138	S	86	CTTGACAAGACCACAATCTGATCCCAAAGATGTGCTCCACAAATCCAGGC	2	+	48661248-48661276:48661277-48661297	2p16.3d	Homo sapiens STON1-GTF2A1L readthrough (STON1-GTF2A1L), mRNA.	A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12) [goid 5672] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]	Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC126823; SALF; MGC126821	MGC126823; SALF; MGC126821
Homo sapiens	RefSeq	XR_037361.1	ILMN_344864	LOC100133465	XR_037361.1	XR_037361.1		100133465	169172130	XR_037361.1	LOC100133465		ILMN_3243549	0001260161	S	1270	TGAGCTACGATTGCACCACTGCACTCCAGCCTGGGCGACAGGATGAGACT					PREDICTED: Homo sapiens misc_RNA (LOC100133465), miscRNA.					
Homo sapiens	RefSeq	NM_002512.2	ILMN_25788	NME1-NME2	NM_001018136.1	NM_001018136.1		654364	66392202	NM_001018136.1	NME1-NME2	NP_001018146.1	ILMN_1662905	0002760358	A	509	GCCTGGTGGGCGAGATCATCAAGCGCTTCGAGCAGAAGGGATTCCGCCTC	17	+	46599246-46599295	17q21.33b	Homo sapiens NME1-NME2 readthrough (NME1-NME2), mRNA.		The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NME2	MGC111212; NM23-H2; NM23B; puf; NDPKB; NDPK-B
Homo sapiens	RefSeq	NM_001018136.1	ILMN_25788	NME1-NME2	NM_001018136.1	NM_001018136.1		654364	66392202	NM_001018136.1	NME1-NME2	NP_001018146.1	ILMN_1693430	0001510609	S	424	GGAGACTTCTGCATACAAGTTGGCAGGACCATGGCCAACCTGGAGCGCAC	17	+	46593607-46593632:46599187-46599210	17q21.33b	Homo sapiens NME1-NME2 readthrough (NME1-NME2), mRNA.		The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NME2	NME2
Homo sapiens	RefSeq	NR_001577.1	ILMN_11663	NME2P1	NR_001577.1	NR_001577.1		283458	38016138	NR_001577.1	NME2P1		ILMN_2111065	0002030296	S	54	AGTCCTTGTTCCAAAAAAGAAAGAGAGGAGCGCAGCACTGCCGCCTGGCC	12	+	119204376-119204425	12q24.31a	Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in, pseudogene 1 (NME2P1), non-coding RNA.		The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_941212.1	ILMN_32746	LOC651933	XM_941212.1	XM_941212.1		651933	89067013	XM_941212.1	LOC651933	XP_946305.1	ILMN_1791945	0003130521	S	487	CAATAGGGAGTTCCCATGTATCTTGTACCCAGTTTCCCTTCTTGTTAACG					PREDICTED: Homo sapiens similar to RuvB-like protein 1 (LOC651933), mRNA.					
Homo sapiens	RefSeq	NM_014282.1	ILMN_21135	HABP4	NM_014282.1	NM_014282.1		22927	24307946	NM_014282.1	HABP4	NP_055097.1	ILMN_2107991	0006510689	S	1477	TCCAGAGGCTCGAGAGCAGGCCATTTCCCAAGAAGATGAAGAATGGTGAC	9	+	98292301-98292350	9q22.33a	Homo sapiens hyaluronan binding protein 4 (HABP4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		SERBP1L; IHABP4; MGC825; Ki-1/57	SERBP1L; IHABP4; MGC825; Ki-1/57
Homo sapiens	RefSeq	NM_014282.1	ILMN_21135	HABP4	NM_014282.1	NM_014282.1		22927	24307946	NM_014282.1	HABP4	NP_055097.1	ILMN_1792384	0005360736	S	1277	CCAACCCAGATGACCCGGAAGATTTCCCTGCGCTGTCTTGAAAGAGCCCT	9	+	98292101-98292141:98292142-98292150	9q22.33a	Homo sapiens hyaluronan binding protein 4 (HABP4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		SERBP1L; IHABP4; MGC825; Ki-1/57	SERBP1L; IHABP4; MGC825; Ki-1/57
Homo sapiens	RefSeq	NM_004584.2	ILMN_9210	RAD9A	NM_004584.2	NM_004584.2		5883	19924112	NM_004584.2	RAD9A	NP_004575.1	ILMN_1684183	0002370102	S	1762	AATTCTAAGAGCCTTGGACCCGAGTGTGTGGCTAGGGTTGCCCTGGCTGG	11	+	66922099-66922148	11q13.1f	Homo sapiens RAD9 homolog A (S. pombe) (RAD9A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12628935] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [evidence IEA]; A signal transduction based surveillance mechanism that prevents the initiation of mitosis until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome [goid 76] [pmid 8943031] [evidence TAS]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [pmid 8943031] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8943031] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15897895] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10359610] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15897895] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14500360] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10359610] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11971963] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10884395] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 10713044] [evidence IDA]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 11971963] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 12628935] [evidence IPI]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 10846170] [evidence IPI]	RAD9	RAD9
Homo sapiens	RefSeq	XM_001732830.1	ILMN_350707	LOC100129654	XM_001732830.1	XM_001732830.1		100129654	169173323	XM_001732830.1	LOC100129654	XP_001732882.1	ILMN_3271138	0005130048	M	1162	CCTTAGGCTCTCCCCTGGTGGGGGCTGGTAGAAGTGGTGGCTATTGTTTT				8q13.1b	PREDICTED: Homo sapiens similar to hCG2037011 (LOC100129654), mRNA.					
Homo sapiens	Unigene	Hs.554642	ILMN_112067	HS.554642	Hs.554642		Hs.554642		1398501	W86013			ILMN_1836848	0004290240	S	140	CGAAACTCGAAACAAAAACAAAGACATATACCCTGGAGATTAATACCCCC					zh57h05.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:416217 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004803.2	ILMN_24008	SLC22A14	NM_004803.2	NM_004803.2		9389	13699860	NM_004803.2	SLC22A14	NP_004794.1	ILMN_1700417	0005900348	S	1902	ATGCCCAGATCCTGAGATTGGACCCATACCCTGTCTCCAACCCTGCCTTG	3	+	38334770-38334819	3p22.2a	Homo sapiens solute carrier family 22 (organic cation transporter), member 14 (SLC22A14), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10072596] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic cations into, out of, within or between cells. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage [goid 15695] [pmid 10072596] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [pmid 10072596] [evidence NAS]	OCTL2; ORCTL4; MGC163415; OCTL4	OCTL2; ORCTL4; MGC163415; OCTL4
Homo sapiens	RefSeq	NM_024331.2	ILMN_20894	TTPAL	NM_001039199.1	NM_001039199.1		79183	85861242	NM_001039199.1	TTPAL	NP_001034288.1	ILMN_1744442	0002370504	S	1986	GAGGCTGGATGAAATGTCAGCTAGGGCCATTTTGGCTGCTGAGGCTCTGG	20	+	42552453-42552502	20q13.12a	Homo sapiens tocopherol (alpha) transfer protein-like (TTPAL), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	DKFZp686E0870; MGC2470	DKFZp686E0870; MGC2470
Homo sapiens	RefSeq	NM_001153.2	ILMN_23425	ANXA4	NM_001153.2	NM_001153.2		307	4809272	NM_001153.2	ANXA4	NP_001144.1	ILMN_1711408	0003440079	S	1471	CCGGTCAGTAAGAATGCCCATCCAGTTTTCTATATTTCATAGTCAAAGCC	2	+	69906610-69906659	2p14a	Homo sapiens annexin A4 (ANXA4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [pmid 2970257] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [pmid 2970257] [evidence NAS]	DKFZp686H02120; MGC75105; PIG28; ANX4	DKFZp686H02120; MGC75105; PIG28; ANX4
Homo sapiens	RefSeq	XR_040915.1	ILMN_348331	LOC388152	XR_040915.1	XR_040915.1		388152	169208489	XR_040915.1	LOC388152		ILMN_3246242	0003830292	S	867	GCATGGCTCAGACTGCATGACAGTCACAGACTCGCCTCTGCTCCTGTGGT	15	-	82660605-82660632:82662626-82662647	15q25.2b	PREDICTED: Homo sapiens misc_RNA (LOC388152), miscRNA.					
Homo sapiens	RefSeq	NM_001033853.1	ILMN_29090	RPL3	NM_001033853.1	NM_001033853.1		6122	76496471	NM_001033853.1	RPL3	NP_001029025.1	ILMN_2319994	0001710369	A	724	GCGCTGGGCAGAAAGGCTACCATCACCGCACTGAGATCAACAAGAAGATT	22	-	39710210-39710213:39710691-39710736	22q13.1d	Homo sapiens ribosomal protein L3 (RPL3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 2891103] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 2891103] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2891103] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 2891103] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]	MGC104284; TARBP-B	MGC104284; TARBP-B
Homo sapiens	RefSeq	NM_001033853.1	ILMN_29090	RPL3	NM_001033853.1	NM_001033853.1		6122	76496471	NM_001033853.1	RPL3	NP_001029025.1	ILMN_2319996	0003990215	A	1118	GGAAGAAGGAGCTTAATGCCAGGAACAGATTTTGCAGTTGGTGGGGTCTC	22	-	39708910-39708944:39708945-39708959	22q13.1d	Homo sapiens ribosomal protein L3 (RPL3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 2891103] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 2891103] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2891103] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 2891103] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]	MGC104284; TARBP-B	MGC104284; TARBP-B
Homo sapiens	RefSeq	NM_004109.3	ILMN_179459	FDX1	NM_004109.3	NM_004109.3		2230	36054077	NM_004109.3	FDX1	NP_004100.1	ILMN_2198812	0007100180	S	2804	CAGGAGCCCACTTCTGACATAACTAACCCACACCTGAGATAACGGCATTA	11	+	109840400-109840449	11q22.3d	Homo sapiens ferredoxin 1 (FDX1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 2969697] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [pmid 2969697] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 1863359] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	LOH11CR1D; ADX; FDX	LOH11CR1D; ADX; FDX
Homo sapiens	RefSeq	XM_944862.1	ILMN_40398	LOC654200	XM_944862.1	XM_944862.1		654200	89043068	XM_944862.1	LOC654200	XP_949955.1	ILMN_1680412	0004150129	S	84	CAGGCGGGACAACGGTCTTTATTTAGGGGCCCGGCTGAGGAGGAGCGCTT					PREDICTED: Homo sapiens similar to growth factor receptor-bound protein 2 (LOC654200), mRNA.					
Homo sapiens	RefSeq	NM_002270.2	ILMN_18758	TNPO1	NM_002270.3	NM_002270.3		3842	133925810	NM_002270.3	TNPO1	NP_002261.3	ILMN_1699820	0003940092	I	82	ATTTCAGGCCCCGGACAGGAGGCAGTGCCGCTTCGGCCGAAGGCCCGAGC	5	+	72112499-72112548	5q13.2c	Homo sapiens transportin 1 (TNPO1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9144189] [evidence TAS]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9144189] [evidence TAS]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [pmid 9144189] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10353245] [evidence IPI]; Interacting selectively with a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus [goid 8139] [pmid 8808633] [evidence TAS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	TRN; IPO2; KPNB2; MIP; MIP1	TRN; IPO2; KPNB2; MIP; MIP1
Homo sapiens	RefSeq	NM_001241.2	ILMN_17698	CCNT2	NM_058241.1	NM_058241.1		905	17978468	NM_058241.1	CCNT2	NP_490595.1	ILMN_1722522	0003520382	A	3919	TTGGGGTACTTAGGAGCCTCTTTGTAGGGACTGTGCCTAGGTAGCATGTC	2	+	135430382-135430431	2q21.3a	Homo sapiens cyclin T2 (CCNT2), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16109376] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9499409] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9499409] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16109376] [evidence IDA]	FLJ90560; MGC134840	FLJ90560; MGC134840
Homo sapiens	RefSeq	NM_058241.1	ILMN_17698	CCNT2	NM_058241.1	NM_058241.1		905	17978468	NM_058241.1	CCNT2	NP_490595.1	ILMN_1787877	0004120390	I	1999	CCTCTCACAACTCTGTTTTTAACCATCCCTTACCCCCTCCTCCCCCTGTC	2	+	135428462-135428511	2q21.3a	Homo sapiens cyclin T2 (CCNT2), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16109376] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9499409] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9499409] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16109376] [evidence IDA]	FLJ90560; MGC134840	FLJ90560; MGC134840
Homo sapiens	RefSeq	NR_003078.1	ILMN_175226	SNORD110	NR_003078.1	NR_003078.1		692213	98162773	NR_003078.1	SNORD110		ILMN_3235397	0001240273	S	26	TCTGTCAATCCCCTGAGTGCAATCACTGATGTCTCCATGTCTCTGAGCAA	20	+	2582883-2582932	20p13c	Homo sapiens small nucleolar RNA, C/D box 110 (SNORD110), small nucleolar RNA.				HBII-55	HBII-55
Homo sapiens	RefSeq	XM_932319.1	ILMN_33517	LOC643558	XM_932319.1	XM_932319.1		643558	89024998	XM_932319.1	LOC643558	XP_937412.1	ILMN_1675401	0005960431	I	858	AGATTTGTTGACAGCGGTTTCCTGGAGTGCTGTCTTGAGAACGATTCTGA	7	+	72242734-72242735:72242736-72242783		PREDICTED: Homo sapiens similar to General transcription factor II-I (GTFII-I) (TFII-I) (Bruton tyrosine kinase-associated protein 135) (BTK-associated protein 135) (BAP-135), transcript variant 5 (LOC643558), mRNA.					
Homo sapiens	RefSeq	NM_024725.2	ILMN_16296	CCDC82	NM_024725.2	NM_024725.2		79780	19923843	NM_024725.2	CCDC82	NP_079001.2	ILMN_1791933	0006130370	S	2585	GGGTCAGAACTGCTGAAAGAGACAAACTCAGCCAAAAACACTTGGAAAGC	11	-	95725650-95725699	11q21d	Homo sapiens coiled-coil domain containing 82 (CCDC82), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ23518; HSPC048	FLJ23518; HSPC048
Homo sapiens	RefSeq	XM_942431.1	ILMN_39843	RUNDC2C	NR_002939.2	NR_002939.2		440352	142364749	NR_002939.2	RUNDC2C		ILMN_1690064	0002370070	A	1774	GAGCAGCGTGTTCAGGGAGATCACAGCCTCCTCTGCCATCTCCATCCTCA	16	+	29303172-29303197:29313608-29313631	16p12.2b-p12.2a	Homo sapiens RUN domain containing 2C (RUNDC2C), non-coding RNA.					
Homo sapiens	RefSeq	NM_001012391.1	ILMN_39843	RUNDC2C	NR_002939.2	NR_002939.2		440352	142364749	NR_002939.2	RUNDC2C		ILMN_1709164	0003460039	I	3875	GAGCTGGGGAGTTCAAGACCAGCCTGGGCAACATAATGAGATTTCAGCTC	16	+	29381346-29381395	16p12.2b-p12.2a	Homo sapiens RUN domain containing 2C (RUNDC2C), non-coding RNA.					
Homo sapiens	Unigene	Hs.544814	ILMN_108153	HS.544814	Hs.544814		Hs.544814		3804085	AI221882			ILMN_1888613	0004250300	S	115	ACATCCTTTGGGGGGTGATGGCAATGTAACCTGTCTTAACAGGGGTATGG	7	-	149551049-149551098		qg99f01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1843321 3, mRNA sequence					
Homo sapiens	RefSeq	XM_938341.1	ILMN_32403	LOC649282	XM_938341.1	XM_938341.1		649282	89038930	XM_938341.1	LOC649282	XP_943434.1	ILMN_1775100	0006110414	S	2	TGCAGGGGTTCCCAGTGGCCAAATCCAACCAGCAGCCATGGGATCTAGAA					PREDICTED: Homo sapiens hypothetical protein LOC649282 (LOC649282), mRNA.					
Homo sapiens	RefSeq	NM_012369.1	ILMN_170843	OR2F1	NM_012369.2	NM_012369.2		26211	92110012	NM_012369.2	OR2F1	NP_036501.2	ILMN_1728067	0006380750	S	115	GGGTCTCCCTGTTTGTCCTGTTCTTGGTCATGTATGTGGTGACCGTGCTG	7	+	143288067-143288116	7q35a	Homo sapiens olfactory receptor, family 2, subfamily F, member 1 (OR2F1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9500546] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2F4; OR2F3P; OR2F5; OR7-140; OR2F3; OR14-60; OR7-139; OLF3	OR2F4; OR2F3P; OR14-60; OR2F3; OLF3; OR2F5; OR7-140; OR7-139
Homo sapiens	RefSeq	NM_181600.1	ILMN_9837	KRTAP13-4	NM_181600.1	NM_181600.1		284827	31791003	NM_181600.1	KRTAP13-4	NP_853631.1	ILMN_1761119	0005130390	S	201	CCCCAGGACCTCCATCCTCTGCTGTCCCTGTCAGACGACTTGCTCTGGAT	21	+	30724665-30724714	21q22.11a	Homo sapiens keratin associated protein 13-4 (KRTAP13-4), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP13.4	KAP13.4
Homo sapiens	RefSeq	NM_006437.2	ILMN_14105	PARP4	NM_006437.3	NM_006437.3		143	112789549	NM_006437.3	PARP4	NP_006428.2	ILMN_1776464	0002450148	S	5219	GGACTCCAGCCCATAAGCACTGTGTCCCCTCTTCATAGAGTCCTCCATTA	13	-	24995269-24995318	13q12.12b	Homo sapiens poly (ADP-ribose) polymerase family, member 4 (PARP4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10644454] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [pmid 11479319] [evidence NAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 12101391] [evidence NAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10100603] [evidence TAS]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 10644454] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 11855821] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12123754] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 12140175] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 11291045] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10100603] [evidence TAS]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [pmid 10644454] [evidence NAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 15169895] [evidence IDA]	p193; PARPL; PH5P; ADPRTL1; VPARP; VAULT3	p193; PARPL; PH5P; ADPRTL1; VPARP; VAULT3
Homo sapiens	RefSeq	NM_001008407.1	ILMN_3150	BCAP29	NM_001008407.1	NM_001008407.1		55973	56549098	NM_001008407.1	BCAP29	NP_001008407.1	ILMN_1705568	0000730367	I	2520	CACACATAGGAGGAAAGAGATAGGAGACTGAGGAAGGGATGGACCCTGAG	7	+	107058281-107058330	7q22.3c	Homo sapiens B-cell receptor-associated protein 29 (BCAP29), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	DKFZp686M2086; BAP29	DKFZp686M2086; BAP29
Homo sapiens	RefSeq	XM_929519.1	ILMN_3150	BCAP29	NM_001008407.1	NM_001008407.1		55973	56549098	NM_001008407.1	BCAP29	NP_001008407.1	ILMN_1715928	0000110128	S	1266	TGCACTGGATGGGCCCCTGGACTTCTGCGACAGCTGCCATGTGCAGCCTC	7	+	107057027-107057076	7q22.3c	Homo sapiens B-cell receptor-associated protein 29 (BCAP29), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	DKFZp686M2086; BAP29	
Homo sapiens	RefSeq	NM_057088.1	ILMN_177449	KRT3	NM_057088.2	NM_057088.2		3850	109148551	NM_057088.2	KRT3	NP_476429.2	ILMN_1695621	0004890202	S	2244	TGATGTATATAGCACACAGCCCCCTCCGCCCCTCCGGTCTGTCGCCAATA	12	-	53183485-53183534	12q13.13d	Homo sapiens keratin 3 (KRT3), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [pmid 9171831] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [pmid 9171831] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9171831] [evidence IMP]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence NAS]	CK3; K3	CK3; K3
Homo sapiens	RefSeq	NM_138713.2	ILMN_4678	NFAT5	NM_138713.2	NM_138713.2		10725	27886522	NM_138713.2	NFAT5	NP_619727.2	ILMN_1780291	0002650093	A	4832	CATCCAGACTCCTATGCTTTCCCAAGAACAGGCACAACCCCCGCAGCAGG	16	+	68284853-68284902	16q22.1e	Homo sapiens nuclear factor of activated T-cells 5, tonicity-responsive (NFAT5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10051678] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10377394] [evidence NAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 10051678] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10051678] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10377394] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15790681] [evidence IDA]	NFATL1; OREBP; TONEBP; NF-AT5; KIAA0827; NFATZ	NFATL1; OREBP; TONEBP; NF-AT5; KIAA0827; NFATZ
Homo sapiens	RefSeq	NM_012284.1	ILMN_11930	KCNH3	NM_012284.1	NM_012284.1		23416	38569492	NM_012284.1	KCNH3	NP_036416.1	ILMN_1704063	0006220309	S	3769	GACAAGGAAGAGCTTTGCCATCCCCTGCATGTGCCCCTGCCTCTACCTGT	12	+	48238260-48238309	12q13.12c	Homo sapiens potassium voltage-gated channel, subfamily H (eag-related), member 3 (KCNH3), mRNA.				BEC1; ELK2; KIAA1282; Kv12.2	BEC1; ELK2; KIAA1282; Kv12.2
Homo sapiens	RefSeq	NM_080816.2	ILMN_3886	SIRPG	NM_080816.2	NM_080816.2		55423	94538336	NM_080816.2	SIRPG	NP_543006.2	ILMN_2383058	0002680050	A	730	AGGCTCCTGTTGCTCCTTCACACAGACCTGGATGCCCCAGAGCAAGGTCT	20	-	1610083-1610132	20p13e	Homo sapiens signal-regulatory protein gamma (SIRPG), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16691243] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9062191] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9062191] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 15383453] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9062191] [evidence TAS]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [pmid 15383453] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 15383453] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383453] [evidence IPI]	SIRPgamma; SIRP-B2; CD172g; SIRPB2; bA77C3.1	SIRPgamma; SIRP-B2; bA77C3.1
Homo sapiens	RefSeq	NM_001042511.1	ILMN_163112	ZNF706	NM_001042511.1	NM_001042511.1		51123	110227590	NM_001042511.1	ZNF706	NP_001035976.1	ILMN_2366490	0000150139	A	2566	GGATATACATCCCCATGTTTAACTGACACACTGGGGGCTCAGTTGTGTGC	8	-	102278489-102278538	8q22.3a	Homo sapiens zinc finger protein 706 (ZNF706), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PNAS-113; HSPC038; PNAS-106	PNAS-113; HSPC038; PNAS-106
Homo sapiens	Unigene	Hs.514440	ILMN_98668	HS.514440	Hs.514440		Hs.514440		6975764	AW440458			ILMN_1844851	0004920671	S	364	TGAGTCTTGGAGAAGGAGCAAGCATGGTGTCTTTAGGGGTGAAAAAGACC	17	-	66147661-66147667:66147671-66147713		xt14e05.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:2779136 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016534.2	ILMN_162822	C12ORF47	XR_017973.1	XR_017973.1		51275	113423764	XR_017973.1	C12orf47		ILMN_1798957	0003140138	S	2180	GGCCTGAAGATGGGAGATTCCTAAGTGGAGGAGAACTGTGCCTTACTGAC				12q24.12b	PREDICTED: Homo sapiens chromosome 12 open reading frame 47 (C12orf47), misc RNA.					FLJ39616
Homo sapiens	RefSeq	NM_012134.1	ILMN_29626	LMOD1	NM_012134.2	NM_012134.2		25802	112380629	NM_012134.2	LMOD1	NP_036266.2	ILMN_1680948	0006760246	S	3636	ATTCCCTCCACCCACTTGCCTGTCACCCCAGTCACCTAAGCAATCACTGG	1	-	201865865-201865914	1q32.1c	Homo sapiens leiomodin 1 (smooth muscle) (LMOD1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2026759] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]	1D; D1; SM-LMOD; 64kD	1D; D1; SM-LMOD; 64kD
Homo sapiens	RefSeq	NM_018129.1	ILMN_2388	PNPO	NM_018129.2	NM_018129.2		55163	114326548	NM_018129.2	PNPO	NP_060599.1	ILMN_1684289	0003180600	S	2244	TATTCCCAGTCCGTCAGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACC	17	+	43380480-43380529	17q21.32b	Homo sapiens pyridoxamine 5'-phosphate oxidase (PNPO), mRNA.		The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds [goid 8615] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: pyridoxamine 5'-phosphate + H2O + O2 = pyridoxal 5'-phosphate + NH3 + H2O2 [goid 4733] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	PDXPO; FLJ10535	PDXPO; FLJ10535
Homo sapiens	RefSeq	NM_015525.2	ILMN_164723	IBTK	NM_015525.2	NM_015525.2		25998	57863303	NM_015525.2	IBTK	NP_056340.2	ILMN_1675669	0006200647	S	5610	GTTCTAGTTTCTGGAAGGTAAGCCTGGGAGACACATAAGCAATTCACTGC	6	-	82937019-82937019:82937861-82937909	6q14.1e	Homo sapiens inhibitor of Bruton agammaglobulinemia tyrosine kinase (IBTK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11577348] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	BTKI; RP1-93K22.1; MGC142256; KIAA1417; MGC142258	RP1-93K22.1; MGC142258; BTKI; MGC142256; KIAA1417
Homo sapiens	RefSeq	NM_030962.1	ILMN_26491	SBF2	NM_030962.1	NM_030962.1		81846	29788754	NM_030962.1	SBF2	NP_112224.1	ILMN_1784595	0003120095	S	7320	TCTGTAGTGCACAGCATTCAGGAGGGTAACACTCAGGATTCATACATGGG	11	-	9756825-9756874	11p15.4a	Homo sapiens SET binding factor 2 (SBF2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 15998640] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 15998640] [evidence NAS]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15998640] [evidence IPI]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19208] [evidence IEA]; Interacting selectively with any phosphatase [goid 19902] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	DKFZp779B2327; CMT4B2; KIAA1766; MTMR13	DKFZp779B2327; CMT4B2; KIAA1766; MTMR13
Homo sapiens	RefSeq	NM_020765.1	ILMN_163857	UBR4	NM_020765.2	NM_020765.2		23352	82659108	NM_020765.2	UBR4	NP_065816.2	ILMN_1699226	0005860037	S	15360	GGTCCTGCTCTCTCGCTGAGTACATCCGCCACAACGACATGCCCATCTAC	1	-	19407850-19407899	1p36.13b	Homo sapiens ubiquitin protein ligase E3 component n-recognin 4 (UBR4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid [goid 16855] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid [goid 16855] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1307; FLJ41863; ZUBR1; RBAF600; p600; RP5-1126H10.1; KIAA0462	KIAA1307; p600; RP5-1126H10.1; KIAA0462
Homo sapiens	RefSeq	XM_939697.1	ILMN_30981	C9ORF130	XM_939697.1	XM_939697.1		286354	89030475	XM_939697.1	C9orf130	XP_944790.1	ILMN_1738678	0005260075	A	1958	GAGATGGCCCCACTGGACTCCAGCCTTGGCGACAGAGAGAGACTCCATCT					PREDICTED: Homo sapiens chromosome 9 open reading frame 130 (C9orf130), mRNA.					
Homo sapiens	RefSeq	NM_207320.1	ILMN_10481	OTUD6A	NM_207320.1	NM_207320.1		139562	46409281	NM_207320.1	OTUD6A	NP_997203.1	ILMN_1730567	0003180431	S	1098	CCCCGGAAATATGAGGGAAATCTCTGCATTGCACCACCAGAGGGGCATAA	X	+	69200163-69200212	Xq13.1b	Homo sapiens OTU domain containing 6A (OTUD6A), mRNA.				HSHIN6; DUBA2; FLJ25831	HSHIN6; DUBA2; FLJ25831
Homo sapiens	RefSeq	NM_020831.3	ILMN_25866	MKL1	NM_020831.3	NM_020831.3		57591	51317360	NM_020831.3	MKL1	NP_065882.1	ILMN_1651767	0007210685	S	4128	TCACGTGTGATTGACATGTAGGTACCCTGCCACGGCCTATGCCCCACCTG	22	-	40806604-40806653	22q13.1e-q13.2a	Homo sapiens megakaryoblastic leukemia (translocation) 1 (MKL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14565952] [evidence IPI]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MAL; BSAC; MRTF-A	MAL; BSAC; MRTF-A
Homo sapiens	RefSeq	NM_018318.3	ILMN_177596	CCDC91	NM_018318.3	NM_018318.3		55297	70980530	NM_018318.3	CCDC91	NP_060788.3	ILMN_2190051	0006380373	S	2136	TTCCCAGTATTTCAGAATGTACTTAATTCACAGGCAGGATGCTTCAATGC	12	+	28593389-28593438	12p11.22b	Homo sapiens coiled-coil domain containing 91 (CCDC91), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		DKFZP779L1558; HSD8; FLJ11088; p56	DKFZP779L1558; HSD8; FLJ11088; p56
Homo sapiens	RefSeq	NM_006404.3	ILMN_21711	PROCR	NM_006404.3	NM_006404.3		10544	34335271	NM_006404.3	PROCR	NP_006395.2	ILMN_1717262	0000290181	S	1163	TGTGGAAAACAGATAATGGAGTTGGGGCAGGAAGCCTATGGCCCATCCTC	20	+	33228539-33228588	20q11.22b	Homo sapiens protein C receptor, endothelial (EPCR) (PROCR), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7929370] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7929370] [evidence TAS]	CCCA; EPCR; CCD41; MGC23024; CD201; bA42O4.2	CCCA; EPCR; CCD41; MGC23024; CD201; bA42O4.2
Homo sapiens	Unigene	Hs.133257	ILMN_77462	HS.133257	Hs.133257		Hs.133257		3308678	AI052687			ILMN_1816953	0001980343	S	279	CCAATACTGCCTATGCTCCATTACTGGTATTTTCCATCACCCAGGTACCC	3	+	187116657-187116706		oz26b02.x1 Soares_total_fetus_Nb2HF8_9w Homo sapiens cDNA clone IMAGE:1676427 3, mRNA sequence					
Homo sapiens	RefSeq	XM_931177.1	ILMN_39429	LOC642934	XM_942991.2	XM_942991.2		642934	113422062	XM_942991.2	LOC642934	XP_948084.1	ILMN_1653039	0007040482	S	7	CTTGCCGATGCTCCCAGCTGAATAAAGCCCTGCCTTCTACAACTCAGTGT				10q23.1c	PREDICTED: Homo sapiens hypothetical LOC642934 (LOC642934), mRNA.					
Homo sapiens	RefSeq	NM_198595.1	ILMN_5058	AFAP1	NM_198595.2	NM_198595.2		60312	125661040	NM_198595.2	AFAP1	NP_940997.1	ILMN_1701998	0002690187	A	7446	TTTCACGTGGTGTAACCCTAGACTGGCGCCCTTGGCGTGCCCCTTTGTGT	4	-	7812689-7812738	4p16.1d	Homo sapiens actin filament associated protein 1 (AFAP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AFAP-110; AFAP	AFAP-110
Homo sapiens	RefSeq	NM_198595.1	ILMN_5058	AFAP1	NM_198595.2	NM_198595.2		60312	125661040	NM_198595.2	AFAP1	NP_940997.1	ILMN_1651235	0003130458	I	160	CGCCCCGGGGCTCCATTGTTAAGGCGGCTGCGGCTCTGTCGGCTGTTCAG	4	-	7992344-7992393	4p16.1d	Homo sapiens actin filament associated protein 1 (AFAP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AFAP-110; AFAP	AFAP-110
Homo sapiens	Unigene	Hs.537004	ILMN_103172	HS.537004	Hs.537004		Hs.537004		34191232	BC040653			ILMN_1917290	0005720292	S	1189	GAAGCTCACCACTGTATTGCTGCCATTAACTCATGCCAGAACCCTTTGCC	X	-	119444894-119444943		Homo sapiens cDNA clone IMAGE:4797120					
Homo sapiens	RefSeq	NM_003581.2	ILMN_163588	NCK2	NM_003581.2	NM_003581.2		8440	52630422	NM_003581.2	NCK2	NP_003572.2	ILMN_2356632	0000130075	A	1507	GGTGGAACACTACAAAAAGGCGCCCATCTTCACCAGCGAGCACGGGGAGA	2	+	105875986-105876035	2q12.2a	Homo sapiens NCK adaptor protein 2 (NCK2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12110186] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IEA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9737977] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [pmid 12110186] [evidence NAS]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 9737977] [evidence TAS]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [pmid 9737977] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9737977] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [pmid 12110186] [evidence IMP]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [pmid 12110186] [evidence IMP]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 12110186] [evidence NAS]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12110186] [evidence IPI]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 12110186] [evidence NAS]; Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [pmid 12110186] [evidence NAS]	NCKbeta; GRB4	NCKbeta; GRB4
Homo sapiens	RefSeq	XM_930054.1	ILMN_40211	LOC440349	XM_930054.1	XM_930054.1		440349	89040450	XM_930054.1	LOC440349	XP_935147.1	ILMN_1667169	0002490187	I	871	GCTTTTGGACAGTCTGCCAGGTCAGGACATGGATACATTTTTCTCCCTAC	16	-	68569409-68569458		PREDICTED: Homo sapiens similar to nuclear pore complex interacting protein, transcript variant 2 (LOC440349), mRNA.					
Homo sapiens	RefSeq	XM_114303.3	ILMN_38911	FRMD4B	XM_114303.3	XM_114303.3		23150	88963237	XM_114303.3	FRMD4B	XP_114303.3	ILMN_1700143	0003420360	I	41	CTTAAGCACTCTCTTCAGTTCCTTTAAATGAGCCGAGGTCATGGTGGTTC	3	-	69485388-69485411:69485412-69485437	3p14.1b	PREDICTED: Homo sapiens FERM domain containing 4B, transcript variant 1 (FRMD4B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]		
Homo sapiens	RefSeq	XM_942052.1	ILMN_46418	LOC652553	XM_942052.1	XM_942052.1		652553	89071720	XM_942052.1	LOC652553	XP_947145.1	ILMN_1656619	0001230373	S	101	AGGATAAGGAGATCATAGCAGAGTACGATACTCAGGTCAAAGTCGACTGA					PREDICTED: Homo sapiens similar to SLIT-ROBO Rho GTPase-activating protein 2 (srGAP2) (Formin-binding protein 2) (LOC652553), mRNA.					
Homo sapiens	RefSeq	XR_038841.1	ILMN_333843	LOC642546	XR_038841.1	XR_038841.1		642546	169216587	XR_038841.1	LOC642546		ILMN_3274226	0000580372	M	3290	CCCACTGGACAGGGTTTTGTCTCTGCATCTCATCGTAGAGCTTGGTGGCC	X	-	79713858-79713907	Xq21.1c	PREDICTED: Homo sapiens misc_RNA (LOC642546), miscRNA.					
Homo sapiens	RefSeq	NM_004832.1	ILMN_17696	GSTO1	NM_004832.1	NM_004832.1		9446	4758483	NM_004832.1	GSTO1	NP_004823.1	ILMN_1808196	0006770730	S	292	GAAGCATACCCAGGGAAGAAGCTGTTGCCGGATGACCCCTATGAGAAAGC	10	+	106009463-106009512	10q25.1a	Homo sapiens glutathione S-transferase omega 1 (GSTO1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 10783391] [evidence NAS]; Catalysis of the reaction: NADH + H+ + 2 monodehydroascorbate = NAD+ + 2 ascorbate [goid 16656] [pmid 10783391] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GSTTLp28; P28; DKFZp686H13163	GSTTLp28; P28; DKFZp686H13163
Homo sapiens	RefSeq	NM_004832.1	ILMN_17696	GSTO1	NM_004832.1	NM_004832.1		9446	4758483	NM_004832.1	GSTO1	NP_004823.1	ILMN_2227573	0004900070	S	670	GACTGGCAAGGTTTCCTAGAGCTCTACTTACAGAACAGCCCTGAGGCCTG	10	+	106015875-106015924	10q25.1a	Homo sapiens glutathione S-transferase omega 1 (GSTO1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 10783391] [evidence NAS]; Catalysis of the reaction: NADH + H+ + 2 monodehydroascorbate = NAD+ + 2 ascorbate [goid 16656] [pmid 10783391] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GSTTLp28; P28; DKFZp686H13163	GSTTLp28; P28; DKFZp686H13163
Homo sapiens	RefSeq	XM_942598.1	ILMN_44440	LOC652881	XM_942598.1	XM_942598.1		652881	89065206	XM_942598.1	LOC652881	XP_947691.1	ILMN_1760796	0004260445	S	193	CAGACCCAGGCTCTTCGAGACTTTGAGAAGGTAAGTCATGTGAGTGGATA					PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein isoform 3 (LOC652881), mRNA.					
Homo sapiens	RefSeq	NR_029706.1	ILMN_387901	MIR185	NR_029706.1	NR_029706.1		406961	262205427	NR_029706.1	MIR185		ILMN_3311030	0000540040	S	12	ATTGGAGAGAAAGGCAGTTCCTGATGGTCCCCTCCCCAGGGGCTGGCTTT				22q11.21d	Homo sapiens microRNA 185 (MIR185), microRNA.					
Homo sapiens	RefSeq	XM_930966.1	ILMN_43995	LOC642637	XM_930966.1	XM_930966.1		642637	88974842	XM_930966.1	LOC642637	XP_936059.1	ILMN_1661610	0002750538	S	121	GCGGCAGCTCCTATCCTTGCAGATATCACCACGGCAGCCATTGGAGATAA	4	+	71161194-71161243	4q13.3a	PREDICTED: Homo sapiens hypothetical LOC642637 (LOC642637), mRNA.					
Homo sapiens	RefSeq	NR_024076.1	ILMN_366199	CXADRP3	NR_024076.1	NR_024076.1		440224	196162703	NR_024076.1	CXADRP3		ILMN_3246761	0003370358	S	189	GGTGGAGTCTTTAAGATTTTCTCTATCTTGAGTGCGCGAGGCGCGGGGAG	18	-	14479325-14479374	18p11.21b	Homo sapiens coxsackie virus and adenovirus receptor pseudogene 3 (CXADRP3), non-coding RNA.					
Homo sapiens	RefSeq	NM_016407.1	ILMN_699	C20ORF43	NM_016407.2	NM_016407.2		51507	142370046	NM_016407.2	C20orf43	NP_057491.1	ILMN_1771815	0004180673	S	1457	TCCCTCTGCTACAGCCCTGGGAGGAGCCAGGATCCTTGTTGGTCTAGCTA	20	+	54527195-54527244	20q13.31a	Homo sapiens chromosome 20 open reading frame 43 (C20orf43), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HSPC164; SHUJUN-3; CDAO5	HSPC164; SHUJUN-3; CDAO5
Homo sapiens	RefSeq	NM_198976.1	ILMN_17156	TH1L	NM_198976.1	NM_198976.1		51497	39812491	NM_198976.1	TH1L	NP_945327.1	ILMN_1663954	0004390288	I	1956	CTTCAGTGAGAAACTGCCCTTACAAACAGTCCCTTCTCTGCTGTCAATCC	20	+	57003282-57003331	20q13.32b	Homo sapiens TH1-like (Drosophila) (TH1L), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12620389] [evidence IPI]	HSPC130; NELF-C; NELF-D; TH1	HSPC130; NELF-C; NELF-D; TH1
Homo sapiens	RefSeq	XM_931329.1	ILMN_38232	LOC653107	XM_931329.1	XM_931329.1		653107	89031076	XM_931329.1	LOC653107	XP_936422.1	ILMN_1725609	0000460392	I	1378	GCCACCTCTGAAAAGTCAATGAGATGAACTAGTCCGGTAGGAATCGGGCC	10	+	47888413-47888462	10q11.22b	PREDICTED: Homo sapiens similar to Annexin A8 (Annexin VIII) (Vascular anticoagulant-beta) (VAC-beta), transcript variant 2 (LOC653107), mRNA.					
Homo sapiens	RefSeq	NM_007244.1	ILMN_308223	PRR4	NM_001098538.1	NM_001098538.1		11272	154448881	NM_001098538.1	PRR4	NP_001092008.1	ILMN_1753665	0001170278	S	653	ACGAGGACACCGTCAACTCTCTCTACCCCGATTTCCTTCTGTCAGCCTGC	12	-	11090974-11091023	12p13.2b	Homo sapiens proline rich 4 (lacrimal) (PRR4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7544782] [evidence TAS]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 7544782] [evidence TAS]		DKFZp779L1763; PROL4; LPRP	DKFZp779L1763; PROL4; LPRP
Homo sapiens	RefSeq	NM_005315.1	ILMN_23102	GSC2	NM_005315.1	NM_005315.1		2928	4885362	NM_005315.1	GSC2	NP_005306.1	ILMN_1734951	0005900639	S	519	GTTCAAGAACCGCCGGGCCAAATGGCGACACCAGAAGCGCGCGTCGGCTT	22	-	19136553-19136602	22q11.21b	Homo sapiens goosecoid homeobox 2 (GSC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9700206] [evidence IDA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9150167] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9700206] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	GSCL	GSCL
Homo sapiens	RefSeq	NM_021803.1	ILMN_18756	IL21	NM_021803.1	NM_021803.1		59067	11141874	NM_021803.1	IL21	NP_068575.1	ILMN_1772674	0006450577	S	365	CCACCTTCCACAAATGCAGGGAGAAGACAGAAACACAGACTAACATGCCC	4	-	123753525-123753533:123756287-123756327	4q27d	Homo sapiens interleukin 21 (IL21), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11081504] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11081504] [evidence NAS]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [pmid 15207081] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [pmid 15765404] [evidence NAS]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [pmid 14635054] [evidence IDA]	 [goid 5126] [evidence IEA]; Interacting selectively with the interleukin-2 receptor [goid 5134] [pmid 12504082] [evidence IPI]	Za11; IL-21	Za11; IL-21
Homo sapiens	RefSeq	NM_000066.2	ILMN_181003	C8B	NM_000066.2	NM_000066.2		732	72377258	NM_000066.2	C8B	NP_000057.1	ILMN_1731293	0005260551	S	1606	CCCTGTCCTGAAAGGATCACGCTGTGACTGCATCTGTCCTGTTGGATCCC	1	-	57397515-57397551:57399008-57399020	1p32.2b	Homo sapiens complement component 8, beta polypeptide (C8B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3052276] [evidence EXP]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 2820472] [evidence TAS]	Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]		MGC163447	MGC163447
Homo sapiens	RefSeq	XM_928140.1	ILMN_38380	LOC645104	XM_928140.1	XM_928140.1		645104	88973385	XM_928140.1	LOC645104	XP_933233.1	ILMN_1794617	0001500521	S	242	CCCAATTCACGAGAACAGAGGCTTGTTGGTCAACTGACAAGCATGAATCT	4	+	17126229-17126240:17133380-17133417	4p15.32b	PREDICTED: Homo sapiens similar to Usher syndrome 3A homolog isoform 1 (LOC645104), mRNA.					
Homo sapiens	RefSeq	NM_005458.5	ILMN_18287	GABBR2	NM_005458.5	NM_005458.5		9568	40255244	NM_005458.5	GABBR2	NP_005449.5	ILMN_1660718	0004780563	S	5387	TGTCGGAGGTGAGCCTGTGCGTCTGTAACCCTTTGTGACTCCTGAGCGTG	9	-	100090536-100090585	9q22.33b-q22.33c	Homo sapiens gamma-aminobutyric acid (GABA) B receptor, 2 (GABBR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10328880] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9872316] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 10328880] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9872316] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-B receptors are G-protein coupled receptors [goid 4965] [pmid 10328880] [evidence TAS]	HRIHFB2099; HG20; GPR51; FLJ36928; GPRC3B; GABABR2	HRIHFB2099; GPRC3B; HG20; GPR51; FLJ36928; GABABR2
Homo sapiens	RefSeq	XM_926661.1	ILMN_34641	LOC643326	XM_926661.1	XM_926661.1		643326	88972596	XM_926661.1	LOC643326	XP_931754.1	ILMN_1725084	0001300561	S	640	CAGGTAGCCACATCTGCCACTAAGCCAGGACAGTTTAGCAAGGCTGAAAA	4	+	3994048-3994076:3994689-3994709		PREDICTED: Homo sapiens similar to beta-1,4-mannosyltransferase (LOC643326), mRNA.					
Homo sapiens	RefSeq	XM_927868.1	ILMN_39269	LOC644774	XM_927868.1	XM_927868.1		644774	89060514	XM_927868.1	LOC644774	XP_932961.1	ILMN_1779258	0006580544	S	11	GGGCACTGGTTCACAGAGCCCACAGCTCCATGGTAGGAGTCAATCTGCCA	X	-	807712-807737:808373-808396		PREDICTED: Homo sapiens similar to Phosphoglycerate kinase 1 (LOC644774), mRNA.					
Homo sapiens	RefSeq	NM_001500.2	ILMN_16535	GMDS	NM_001500.2	NM_001500.2		2762	41584204	NM_001500.2	GMDS	NP_001491.1	ILMN_1711227	0006840156	S	1496	CCTCCAGGGTTTGGGTCGCTTTGCGTTTGTCGAAGCCTCCTCTGAATGGC	6	-	1906150-1906199	6p25.3a	Homo sapiens GDP-mannose 4,6-dehydratase (GMDS), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11698403] [evidence IC ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9525924] [evidence TAS]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 11698403] [evidence NAS]; The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate [goid 19673] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GDP-L-fucose from GDP-D-mannose via GDP-4-dehydro-6-deoxy-D-mannose, requiring the functions of GDP-mannose 4,6-dehydratase (EC:4.2.1.47) and GDP-L-fucose synthase (EC:1.1.1.271) [goid 42351] [pmid 11698403] [evidence TAS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving GDP-mannose, a substance composed of mannose in glycosidic linkage with guanosine diphosphate [goid 19673] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: GDP-mannose = GDP-4-dehydro-6-deoxy-D-mannose + H2O [goid 8446] [pmid 11698403] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: GDP-mannose = GDP-4-dehydro-6-deoxy-D-mannose + H2O [goid 8446] [evidence IEA]	GMD	GMD
Homo sapiens	Unigene	Hs.581645	ILMN_133826	HS.581645	Hs.581645		Hs.581645		51667287	CR744384			ILMN_1842908	0001570192	S	565	GCACATAGATCAACAGGCCATCCGTGCCTCGAACACCTACATCAACGGCC	3	+	185708720-185708769		CR744384 Soares_testis_NHT Homo sapiens cDNA clone IMAGp971N0157 ; IMAGE:1048828 5, mRNA sequence					
Homo sapiens	Unigene	Hs.520591	ILMN_99800	HS.520591	Hs.520591		Hs.520591		6660861	AW273831			ILMN_1857413	0000730008	S	171	GCACCATGCATGGAGTCAGCCATTTCTCTAGGAACCTTGATTCCTGTCTG	7	-	199405236-199405285		xv24e03.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2814076 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020666.2	ILMN_24062	CLK4	NM_020666.2	NM_020666.2		57396	47717135	NM_020666.2	CLK4	NP_065717.1	ILMN_1695853	0005820403	S	2086	GGGTGATGTCAGGGTGATAACCAGACATTCATGGAAAGGCATGCAGTTTG	5	-	178030036-178030085	5q35.3c	Homo sapiens CDC-like kinase 4 (CLK4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp686A20267	DKFZp686A20267
Homo sapiens	RefSeq	NM_004014.1	ILMN_22600	DMD	NM_004014.1	NM_004014.1		1756	5032294	NM_004014.1	DMD	NP_004005.1	ILMN_1786069	0002350358	I	1	GGGTTTTCTCAGGATTGCTATGCAACAGGATCAGTGCTGTAGTGCCCGGT	X	-	31436286-31436335	Xp21.2a-p21.1d	Homo sapiens dystrophin (DMD), transcript variant Dp116, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 2261642] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 3282674] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 10867799] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 8282811] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [pmid 7545544] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [pmid 16000376] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 2261642] [evidence ISS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 1824797] [evidence NAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [pmid 16000376] [evidence IDA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 2261642] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 12376554] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 3282674] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16000376] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 16000376] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 3287171] [evidence TAS]; Interacting selectively with the enzyme nitric-oxide synthase [goid 50998] [pmid 7545544] [evidence ISS]	DXS272; DXS269; DXS268; DXS270; DXS239; DXS142; DXS206; DXS230; CMD3B; DXS164; BMD	DXS272; DXS269; DXS268; DXS270; DXS239; DXS142; DXS206; DXS230; CMD3B; DXS164; BMD
Homo sapiens	RefSeq	NM_000331.2	ILMN_28491	SAA1	NM_000331.3	NM_000331.3		6288	133930781	NM_000331.3	SAA1	NP_000322.2	ILMN_1701017	0002600424	I	166	GGGGCATACAGCCATACCATTCTGAAGGTGTCTTATCTCCTCTGATCTAG	11	+	18244513-18244562	11p15.1d	Homo sapiens serum amyloid A1 (SAA1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 7516407] [evidence NAS]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [pmid 9815279] [evidence NAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 7561109] [evidence NAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9892621] [evidence IDA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [pmid 1697614] [evidence NAS]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [pmid 12557751] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 11830469] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 7561109] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 9252455] [evidence IDA]; The movement of a macrophage in response to an external stimulus [goid 48246] [pmid 7561109] [evidence IDA]; The directed movement of a lymphocyte in response to an external stimulus [goid 48247] [pmid 7636186] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [pmid 9605178] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 from a cell or group of cells [goid 50716] [pmid 12857601] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [pmid 9823935] [evidence NAS]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [pmid 9892621] [evidence IDA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	MGC111216; SAA; PIG4; TP53I4	MGC111216; SAA; PIG4; TP53I4
Homo sapiens	RefSeq	NM_199161.1	ILMN_28491	SAA1	NM_000331.3	NM_000331.3		6288	133930781	NM_000331.3	SAA1	NP_000322.2	ILMN_1808732	0000130338	A	653	AAGCGGGGAGAGGGTACACAATGGGTATCTAATAAATACTTAAGAGGTGG	11	+	18248039-18248088	11p15.1d	Homo sapiens serum amyloid A1 (SAA1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 7516407] [evidence NAS]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [pmid 9815279] [evidence NAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 7561109] [evidence NAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9892621] [evidence IDA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [pmid 1697614] [evidence NAS]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [pmid 12557751] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 11830469] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 7561109] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 9252455] [evidence IDA]; The movement of a macrophage in response to an external stimulus [goid 48246] [pmid 7561109] [evidence IDA]; The directed movement of a lymphocyte in response to an external stimulus [goid 48247] [pmid 7636186] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [pmid 9605178] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 from a cell or group of cells [goid 50716] [pmid 12857601] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [pmid 9823935] [evidence NAS]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [pmid 9892621] [evidence IDA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	MGC111216; SAA; PIG4; TP53I4	MGC111216; SAA; PIG4; TP53I4
Homo sapiens	Unigene	Hs.534704	ILMN_102494	HS.534704	Hs.534704		Hs.534704		51476508	CR749394			ILMN_1856669	0000010138	S	3878	TTAAATAGAGGGCACGCAGGCATGTGGACTCGGGAGGTGGCAGAAGGAGC	15	+	25284931-25284980		Homo sapiens mRNA; cDNA DKFZp686B23135 (from clone DKFZp686B23135)					
Homo sapiens	RefSeq	NM_001004744.1	ILMN_174768	OR5R1	NM_001004744.1	NM_001004744.1		219479	52317137	NM_001004744.1	OR5R1	NP_001004744.1	ILMN_1655449	0004060239	S	680	GGATCCGCTCTACTCAGGGGCAACACAAAGCCATTTCCACCTGTGGCTCC	11	-	56184979-56185028	11q11c	Homo sapiens olfactory receptor, family 5, subfamily R, member 1 (OR5R1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR5R1P; OR11-185	OR5R1P; OR11-185
Homo sapiens	RefSeq	NM_018204.2	ILMN_168115	CKAP2	NM_018204.2	NM_018204.2		26586	19923520	NM_018204.2	CKAP2	NP_060674.2	ILMN_2181060	0007040711	S	3273	TTATTGACTTCTCATGTTCTAGAGAGTAGGACTTTTATTCCGTGTACCTG	13	+	51948405-51948454	13q14.3d	Homo sapiens cytoskeleton associated protein 2 (CKAP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		TMAP; FLJ10749; LB1; se20-10	TMAP; FLJ10749; LB1; se20-10
Homo sapiens	RefSeq	NM_001015002.1	ILMN_17586	LLGL2	NM_001015002.1	NM_001015002.1		3993	62739162	NM_001015002.1	LLGL2	NP_001015002.1	ILMN_2413615	0004280468	A	722	ATGGTGGAGGCACTGCAGGAGCACCCTCGAGACCCCAACCAGATCCTGAT	17	+	71070729-71070778	17q25.1c	Homo sapiens lethal giant larvae homolog 2 (Drosophila) (LLGL2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		LGL2; HGL	LGL2; HGL
Homo sapiens	RefSeq	NM_033259.2	ILMN_184093	CAMK2N2	NM_033259.2	NM_033259.2		94032	68161536	NM_033259.2	CAMK2N2	NP_150284.1	ILMN_1660633	0002940142	S	1053	TGTTGAGGCTGGGATGAGACAAGCCCCCGACACGGTTACCAACCACATGG	3	-	185459954-185460003	3q27.1b	Homo sapiens calcium/calmodulin-dependent protein kinase II inhibitor 2 (CAMK2N2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]	CAM-KIIN	CAM-KIIN; CAMKIIN
Homo sapiens	RefSeq	NM_080611.3	ILMN_15949	DUSP15	NM_080611.3	NM_080611.3		128853	29826314	NM_080611.3	DUSP15	NP_542178.2	ILMN_1689000	0003850138	I	310	GGGTGCACCCGGACCGCCGCCCCCGGGATCATGGGCAATGGCATGACCAA	20	-	30458120-30458140:30458141-30458169	20q11.21b	Homo sapiens dual specificity phosphatase 15 (DUSP15), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	VHY	VHY
Homo sapiens	RefSeq	NM_080611.3	ILMN_15949	DUSP15	NM_080611.3	NM_080611.3		128853	29826314	NM_080611.3	DUSP15	NP_542178.2	ILMN_2382471	0000150022	A	1252	GCCACCTGGTGCCTTAGTCCTTGGGCTGGGGGAGGGGGCCCACCCTTAAA	20	-	30448951-30449000	20q11.21b	Homo sapiens dual specificity phosphatase 15 (DUSP15), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	VHY	VHY
Homo sapiens	Unigene	Hs.25567	ILMN_71976	HS.25567	Hs.25567		Hs.25567		27838256	BX113481			ILMN_1913477	0004540408	S	591	CCTTGTCGGCTCAAGGACTTTCTCTCATCCCCCTCCCACATGGAAACAGC	11	-	6296034-6296083		BX113481 Soares breast 2NbHBst Homo sapiens cDNA clone IMAGp998N23240, mRNA sequence					
Homo sapiens	RefSeq	NR_003223.1	ILMN_180780	SNORD114-30	NR_003223.1	NR_003223.1		767611	115392033	NR_003223.1	SNORD114-30		ILMN_3310050	0005860632	S	19	GGTATTGGATGGGTCTTCGTCAGTGAATGCCTATCTGGAACTCTGAGGTC	14	+	100528027-100528076	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 114-30 (SNORD114-30), small nucleolar RNA.				14q(II-30)	14q(II-30)
Homo sapiens	RefSeq	NM_005105.2	ILMN_24323	RBM8A	NM_005105.2	NM_005105.2		9939	15812217	NM_005105.2	RBM8A	NP_005096.1	ILMN_1781870	0007150168	S	1087	GACACTGGTCAGTATTTCTTTTTTGGGGGGAACTAGGAGAGCAGGAGTAG	1	+	144221101-144221150	1q21.1b	Homo sapiens RNA binding motif protein 8A (RBM8A), mRNA.				RBM8; RBM8B; ZRNP1; Y14; ZNRP; MDS014; BOV-1B; BOV-1A; BOV-1C	RBM8; RBM8B; ZRNP1; Y14; ZNRP; MDS014; BOV-1B; BOV-1A; BOV-1C
Homo sapiens	RefSeq	NM_020375.1	ILMN_183781	C12ORF5	NM_020375.2	NM_020375.2		57103	110825964	NM_020375.2	C12orf5	NP_065108.1	ILMN_1791792	0002350762	S	732	CAGCCACTCTGAGCAGATCTGAACTTATGTCAGTCACTCCCAATACAGGG	12	+	4331958-4332007	12p13.32a	Homo sapiens chromosome 12 open reading frame 5 (C12orf5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	TIGAR	
Homo sapiens	RefSeq	NM_003692.2	ILMN_183443	TMEFF1	NM_003692.2	NM_003692.2		8577	29568104	NM_003692.2	TMEFF1	NP_003683.2	ILMN_1729498	0003120403	S	1560	CCACTTCTTCCACAATGACCACAGCAAATGACCAAGCATGAACTAAAGGT	9	+	102379010-102379059	9q31.1a	Homo sapiens transmembrane protein with EGF-like and two follistatin-like domains 1 (TMEFF1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		C9orf2; H7365	orf; C9orf2; H7365
Homo sapiens	RefSeq	NR_030191.1	ILMN_387843	MIR519B	NR_030191.1	NR_030191.1		574469	262205302	NR_030191.1	MIR519B		ILMN_3309414	0002070681	S	7	TGACCCTCTAGAGGGAAGCGCTTTCTGTTGTCTGAAAGAAAAGAAAGTGC				19q13.41b	Homo sapiens microRNA 519b (MIR519B), microRNA.					
Homo sapiens	RefSeq	NM_001005290.2	ILMN_9176	PSRC1	NM_001032290.1	NM_001032290.1		84722	73858558	NM_001032290.1	PSRC1	NP_001027461.1	ILMN_1671843	0001070762	A	1634	CCTGAATCGCATTCTCTACTGGACTCTGGCCTGCTTGGAGAGGTGGCAGC	1	-	109822305-109822354	1p13.3b	Homo sapiens proline/serine-rich coiled-coil 1 (PSRC1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 12427559] [evidence ISS]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 12427559] [evidence ISS]	A process that results in a parallel arrangement of microtubules [goid 1578] [pmid 12427559] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 12427559] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 12427559] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [pmid 12427559] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [pmid 12427559] [evidence ISS]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12427559] [evidence ISS]	RP11-297O4.2; MGC1780; FP3214; DDA3	RP11-297O4.2; DDA3; MGC1780; FP3214
Homo sapiens	RefSeq	NM_001032290.1	ILMN_9176	PSRC1	NM_001032290.1	NM_001032290.1		84722	73858558	NM_001032290.1	PSRC1	NP_001027461.1	ILMN_1801152	0006290050	I	797	TGGGGAGTTTGTGGGATTGACCCTGAAATTTCTCCACCCCTCTCCACCAG	1	-	109823668-109823717	1p13.3b	Homo sapiens proline/serine-rich coiled-coil 1 (PSRC1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 12427559] [evidence ISS]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 12427559] [evidence ISS]	A process that results in a parallel arrangement of microtubules [goid 1578] [pmid 12427559] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 12427559] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 12427559] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [pmid 12427559] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [pmid 12427559] [evidence ISS]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12427559] [evidence ISS]	RP11-297O4.2; MGC1780; FP3214; DDA3	RP11-297O4.2; DDA3; MGC1780; FP3214
Homo sapiens	RefSeq	NM_006614.2	ILMN_163854	CHL1	NM_006614.2	NM_006614.2		10752	27894375	NM_006614.2	CHL1	NP_006605.2	ILMN_2138005	0006860241	S	7181	TGGAAGAGATAAGCTAAAGAGGGGACAATAATGAGAAATGTTGGTGTGCT	3	+	423482-423531	3p26.3c	Homo sapiens cell adhesion molecule with homology to L1CAM (close homolog of L1) (CHL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9799093] [evidence TAS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9799093] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9799093] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC132578; L1CAM2; CALL; FLJ44930	MGC132578; CALL; L1CAM2; FLJ44930
Homo sapiens	RefSeq	NM_006614.2	ILMN_163854	CHL1	NM_006614.2	NM_006614.2		10752	27894375	NM_006614.2	CHL1	NP_006605.2	ILMN_1713347	0005810491	S	5866	TGTGGTGCACAGCTTGTGAGGAGGGCAAGGTTGTGACGTTCGAGCTTAGT	3	+	419615-419625:422178-422216	3p26.3c	Homo sapiens cell adhesion molecule with homology to L1CAM (close homolog of L1) (CHL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9799093] [evidence TAS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9799093] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9799093] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC132578; L1CAM2; CALL; FLJ44930	MGC132578; CALL; L1CAM2; FLJ44930
Homo sapiens	RefSeq	NM_001105519.1	ILMN_353060	C2ORF70	NM_001105519.1	NM_001105519.1		339778	157502166	NM_001105519.1	C2orf70	NP_001098989.1	ILMN_3247753	0002070377	S	628	CCTGATGCCTGAGATCCTGGGTCGTGACCAGCCTGGCTTGCTTGGAATAA	2	+	26655832-26655881	2p23.3b	Homo sapiens chromosome 2 open reading frame 70 (C2orf70), mRNA.					
Homo sapiens	RefSeq	XM_930608.1	ILMN_43862	LOC641700	XM_930608.1	XM_930608.1		641700	88985480	XM_930608.1	LOC641700	XP_935701.1	ILMN_1705630	0006040280	S	41	AGACTGAAGAGACTTTCAAGCCTCCACTGAGCTGCTGCCTGCCCGCCACA	5	-	138822451-138822483:138824748-138824764	5q31.2d	PREDICTED: Homo sapiens hypothetical protein LOC641700 (LOC641700), mRNA.					
Homo sapiens	RefSeq	NM_053281.2	ILMN_19620	DACH2	NM_053281.2	NM_053281.2		117154	31340570	NM_053281.2	DACH2	NP_444511.1	ILMN_1810210	0001440021	S	1771	GAAATGGCACAACAGTTGTATTCAGCCTGAAAGGTCCTCGCTGGCTTTAC	X	+	85973785-85973814:85973815-85973834	Xq21.2a	Homo sapiens dachshund homolog 2 (Drosophila) (DACH2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	MGC138545; FLJ31391	MGC138545; FLJ31391
Homo sapiens	RefSeq	NM_001006116.1	ILMN_170984	C21ORF49	XR_017893.1	XR_017893.1		54067	113429077	XR_017893.1	C21orf49		ILMN_1684866	0006560228	S	1858	CCTCGGAGTCTCTCTGGATGGCTTCTTGCCTAGGGTGACTGACAGAGGGA	21	+	33092554-33092603	21q22.11b	PREDICTED: Homo sapiens chromosome 21 open reading frame 49 (C21orf49), misc RNA.					
Homo sapiens	RefSeq	XM_946213.1	ILMN_138146	RBM19	XM_946213.1	XM_946213.1		9904	89036338	XM_946213.1	RBM19	XP_951306.1	ILMN_1781150	0004560711	I	18	TGCAGAGGCAGGACTTGGGAATCTGAAATGAGACCAGCCGGGAGCTGTGA				12q24.13b-q24.21a	PREDICTED: Homo sapiens RNA binding motif protein 19, transcript variant 3 (RBM19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	NM_014272.3	ILMN_2545	ADAMTS7	NM_014272.3	NM_014272.3		11173	133925806	NM_014272.3	ADAMTS7	NP_055087.2	ILMN_3251322	0000240673	S	972	TGGTGGAGTACCACGGACAGCCGCAGGTTGAGAGCTATGTGCTGACCATC	15	-	79088940-79088989	15q25.1a	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 7 (ADAMTS7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434H204; ADAM-TS7	DKFZp434H204; ADAM-TS7
Homo sapiens	RefSeq	XR_018194.2	ILMN_177241	LOC644415	XR_018194.2	XR_018194.2		644415	169216382	XR_018194.2	LOC644415		ILMN_3283326	0003850156	M	725	ATGGAAGCCAAGCTGATCCCCAACTCACTGGCCACCGCAGGGGACGGCCT				Xq22.3a	PREDICTED: Homo sapiens misc_RNA (LOC644415), miscRNA.					
Homo sapiens	RefSeq	XM_935575.1	ILMN_35526	LOC641825	XM_935575.1	XM_935575.1		641825	89027574	XM_935575.1	LOC641825	XP_940668.1	ILMN_1660357	0006620576	S	121	GGGAGGAAGGAACGAGGCAAGGAGCTAAAGCAGCGTGCGTTCAGCCCTGG					PREDICTED: Homo sapiens hypothetical protein LOC641825 (LOC641825), mRNA.					
Homo sapiens	RefSeq	NM_001954.3	ILMN_27674	DDR1	NM_013993.2	NM_013993.2		780	83977449	NM_013993.2	DDR1	NP_054699.2	ILMN_1812262	0003710196	S	3511	TTGGGCTTCTTCCTCCTCCATCACCTGAAACACTGGACCTGGGGGTAGCC	6	+	30867583-30867632	6p21.33a	Homo sapiens discoidin domain receptor tyrosine kinase 1 (DDR1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8390675] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8302582] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 9659899] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17721511] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TRKE; EDDR1; CD167; NEP; PTK3A; PTK3; DDR; CAK; NTRK4; RTK6; MCK10	EDDR1; CD167; TRKE; NEP; PTK3A; PTK3; DDR; CAK; NTRK4; MCK10; RTK6
Homo sapiens	RefSeq	XM_932212.1	ILMN_36616	LOC644489	XM_932212.1	XM_932212.1		644489	89035795	XM_932212.1	LOC644489	XP_937305.1	ILMN_1660898	0001510156	S	1	TAAAGTCTTGAAATGTCTTGAGTGATTGGAGGACCTTTATTTTTCACGCC	12	-	126686548-126686597	12q24.32b	PREDICTED: Homo sapiens hypothetical protein LOC644489 (LOC644489), mRNA.					
Homo sapiens	RefSeq	NM_005506.2	ILMN_12802	SCARB2	NM_005506.2	NM_005506.2		950	33598925	NM_005506.2	SCARB2	NP_005497.1	ILMN_1814726	0004810435	S	4542	GCTCGAGATATGAGTTCTGCAAAAGGTGGTCCGCATCCTTGGCCCTCTGG	4	-	77299074-77299123	4q21.1a	Homo sapiens scavenger receptor class B, member 2 (SCARB2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 1374238] [evidence TAS]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1374238] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022370] [evidence IPI]	CD36L2; HLGP85; SR-BII; LIMPII	CD36L2; HLGP85; SR-BII; LIMPII
Homo sapiens	RefSeq	NM_033083.5	ILMN_173601	EAF1	NM_033083.6	NM_033083.6		85403	109150420	NM_033083.6	EAF1	NP_149074.3	ILMN_1685012	0003840437	S	4201	TGGCAAGGAAGGTAGGATTTCTGAAACTCAGGCCTTAACCAATAGGTTGG	3	+	15458837-15458886	3p24.3e	Homo sapiens ELL associated factor 1 (EAF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17395368] [evidence IPI]		
Homo sapiens	RefSeq	XM_001717310.1	ILMN_338723	LOC100129036	XM_001717310.1	XM_001717310.1		100129036	169170948	XM_001717310.1	LOC100129036	XP_001717362.1	ILMN_3180843	0003170743	A	181	GGCCGGGAGGGTCATCGGCGTTTAAGGCAGCCTCCCACACCAAGTGCACC	7	-	26382709-26382758	7p15.2b	PREDICTED: Homo sapiens similar to ubiquitin-conjugating enzyme E2Q (putative) 2 (LOC100129036), mRNA.					
Homo sapiens	RefSeq	XM_001721590.1	ILMN_337399	LOC100134216	XM_001721590.1	XM_001721590.1		100134216	169217680	XM_001721590.1	LOC100134216	XP_001721642.1	ILMN_3237765	0007560521	S	61	GAGAGCGAGTATGAGCAGGTGAAGACCACGCTGAAGGAGGGGCTGCAGAA					PREDICTED: Homo sapiens similar to mucin 3 (LOC100134216), partial mRNA.					
Homo sapiens	RefSeq	NM_001018049.1	ILMN_182958	PAEP	NM_001018049.1	NM_001018049.1		5047	65507500	NM_001018049.1	PAEP	NP_001018059.1	ILMN_2389069	0001510161	A	520	GGCCCCTGCCCAGGCACCTATGGTACTTGCTGGACTTGAAACAGATGGAA	9	+	137597131-137597180	9q34.3b	Homo sapiens progestagen-associated endometrial protein (PAEP), transcript variant 1, mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 3194393] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC142288; GdS; GD; PP14; PEP; PAEG; GdF; MGC138509; GdA	MGC142288; GdS; GD; PP14; PEP; PAEG; GdF; MGC138509; GdA
Homo sapiens	RefSeq	NM_014765.2	ILMN_370981	TOMM20	NM_014765.2	NM_014765.2		9804	208609996	NM_014765.2	TOMM20	NP_055580.1	ILMN_3251472	0006290681	S	3121	GTAGAGCTTGCATAGTCGGCACTCAGTAAATGTTTGGTTCCTTTTGCCCC	1	-	235272872-235272921	1q42.3b	Homo sapiens translocase of outer mitochondrial membrane 20 homolog (yeast) (TOMM20), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; A large complex of the mitochondrial outer membrane that mediates transport of proteins into all mitochondrial compartments [goid 5742] [pmid 7498524] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of a protein from the cytoplasm to the mitochondrion [goid 43681] [pmid 14557246] [evidence IDA]	Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [pmid 7584026] [evidence NAS]; Interacting selectively with an unfolded protein [goid 51082] [pmid 14557246] [evidence IDA]		
Homo sapiens	RefSeq	XR_015745.1	ILMN_164426	LOC729153	XR_015745.1	XR_015745.1		729153	113424855	XR_015745.1	LOC729153		ILMN_3304725	0004260474	M	425	CTGCCCAGGTCCTCACTGAGCAGAGATGGAGCGTTCATGTCAGAGACTGC				14q21.1b	PREDICTED: Homo sapiens misc_RNA (LOC729153), miscRNA.					
Homo sapiens	RefSeq	XM_001724586.1	ILMN_349960	LOC100128526	XM_001724586.1	XM_001724586.1		100128526	169215839	XM_001724586.1	LOC100128526	XP_001724638.1	ILMN_3193791	0006040164	A	140	GCAGCGGAGGGGCAGTGGGGCCCCAGCATCCCCTGAAGCCTCACCTGCAG				22q12.3c	PREDICTED: Homo sapiens hypothetical LOC100128526 (LOC100128526), mRNA.					
Homo sapiens	RefSeq	NM_181509.1	ILMN_3421	MAP1LC3A	NM_181509.1	NM_181509.1		84557	31563517	NM_181509.1	MAP1LC3A	NP_852610.1	ILMN_1776188	0005490240	A	850	CCCCTCGGTCTCCACGTGGTGTATGGATCTGTGGTCATTGTCCCTCTGCA	20	+	32611733-32611782	20q11.22a	Homo sapiens microtubule-associated protein 1 light chain 3 alpha (MAP1LC3A), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 15187094] [evidence IDA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 12740394] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15187094] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; The lipid bilayer surrounding an organelle [goid 31090] [pmid 12740394] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 8429] [pmid 16303767] [evidence IDA]	MAP1ALC3; MAP1BLC3	MAP1ALC3; MAP1BLC3
Homo sapiens	RefSeq	NM_181509.1	ILMN_3421	MAP1LC3A	NM_181509.1	NM_181509.1		84557	31563517	NM_181509.1	MAP1LC3A	NP_852610.1	ILMN_1711986	0001010079	I	43	CCGAGTTGCTGACTGACCCTCCACCTCAGAGGTAGTTCTGACACTGTCTC	20	+	32601383-32601432	20q11.22a	Homo sapiens microtubule-associated protein 1 light chain 3 alpha (MAP1LC3A), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 15187094] [evidence IDA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 12740394] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15187094] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; The lipid bilayer surrounding an organelle [goid 31090] [pmid 12740394] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 8429] [pmid 16303767] [evidence IDA]	MAP1ALC3; MAP1BLC3	MAP1ALC3; MAP1BLC3
Homo sapiens	RefSeq	NM_018669.4	ILMN_3238	WDR4	NM_018669.4	NM_018669.4		10785	40217836	NM_018669.4	WDR4	NP_061139.2	ILMN_1793302	0006020440	I	1911	CGGTGGCACAGATGGTGAACTTGTTTCAGGAAGTGTGAGCACGGGCCTGG	21	-	44269510-44269559	21q22.3b	Homo sapiens WD repeat domain 4 (WDR4), transcript variant 1, mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16780588] [evidence IDA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TRM82	TRM82
Homo sapiens	Unigene	Hs.552354	ILMN_110956	HS.552354	Hs.552354		Hs.552354		6035867	AW080790			ILMN_1892599	0001030398	S	81	GGGCTCCTTCCCTCTGAAGGTATGTTTGCGGGGAATCCAAAATTCATGGG	12	-	71624356-71624405		xc52f06.x1 NCI_CGAP_Eso2 Homo sapiens cDNA clone IMAGE:2587907 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020760.1	ILMN_20608	HECW2	NM_020760.1	NM_020760.1		57520	55741472	NM_020760.1	HECW2	NP_065811.1	ILMN_1775268	0006290475	S	6706	CTGGGACCCTCAAGAGGAATACCACTTATGTTACACTCCTGCACTAAAGG	2	-	197064295-197064344	2q32.3e-q33.1a	Homo sapiens HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (HECW2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	DKFZp686M17164; NEDL2	DKFZp686M17164; NEDL2
Homo sapiens	RefSeq	NM_001098634.1	ILMN_309011	RBM47	NM_001098634.1	NM_001098634.1		54502	148833512	NM_001098634.1	RBM47	NP_001092104.1	ILMN_3224926	0004780600	A	4805	CATTGGTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTT	4	-	40425558-40425607	4p14a	Homo sapiens RNA binding motif protein 47 (RBM47), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	DKFZp686F02235; FLJ21344; FLJ20273; FLJ21643	DKFZp686F02235; FLJ21344; FLJ20273; FLJ21643
Homo sapiens	RefSeq	NM_001012707.1	ILMN_2088	C21ORF114	NM_001012707.1	NM_001012707.1		378826	60593033	NM_001012707.1	C21orf114	NP_001012725.1	ILMN_1735189	0003290093	S	1990	CTCAGACCATAGTGGACCGATACTAGAAATCACCTACAAAAGGAACCACC	21	+	18001586-18001635	21q21.1c	Homo sapiens chromosome 21 open reading frame 114 (C21orf114), mRNA.				PRED75	PRED75
Homo sapiens	RefSeq	NM_013403.1	ILMN_42010	STRN4	NM_001039877.1	NM_001039877.1		29888	89886479	NM_001039877.1	STRN4	NP_001034966.1	ILMN_1696190	0001770048	S	2992	TAACGGGATTTTCATGGCGCCGCCCCACCCGCATTATCACTGTGTGATGG	19	-	51914776-51914825	19q13.32b	Homo sapiens striatin, calmodulin binding protein 4 (STRN4), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10748158] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10748158] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10748158] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 10748158] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 10748158] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 10748158] [evidence TAS]	ZIN; zinedin; FLJ35594	ZIN; zinedin
Homo sapiens	RefSeq	XM_936391.1	ILMN_37462	LOC642244	XM_936391.1	XM_936391.1		642244	88956377	XM_936391.1	LOC642244	XP_941484.1	ILMN_1789690	0007000092	S	380	ACAACTTCGGACCACCGCCTGCCGCCGGCACCTTCGGCTGCTCTCAGCGG					PREDICTED: Homo sapiens similar to forkhead box I2 (LOC642244), mRNA.					
Homo sapiens	RefSeq	NR_030324.1	ILMN_388047	MIR593	NR_030324.1	NR_030324.1		693178	262205962	NR_030324.1	MIR593		ILMN_3310176	0001430326	S	45	TCCCTCTGGGGGAGCAAGGAGTGGTGCTGGGTTTGTCTCTGCTGGGGTTT				7q32.1a	Homo sapiens microRNA 593 (MIR593), microRNA.					
Homo sapiens	RefSeq	NM_181722.2	ILMN_180740	LOC285908	NM_181722.2	NM_181722.2		285908	57863306	NM_181722.2	LOC285908	NP_859073.2	ILMN_1733103	0001660762	S	4098	GGCCCTCTCTTACACCAGCCCCTGTCTCAGGATTGTCTCTTCACGCCCAT	7	-	65478742-65478791	7q11.21e	Homo sapiens hypothetical protein LOC285908 (LOC285908), mRNA.					
Homo sapiens	RefSeq	XM_942027.1	ILMN_31258	LOC652537	XM_942027.1	XM_942027.1		652537	88971364	XM_942027.1	LOC652537	XP_947120.1	ILMN_1656589	0005290180	S	16	GGGGGGTCGGCCGTCGCAGCCATGGAGGCCAACTGGACCTCGTTCCTGTT					PREDICTED: Homo sapiens similar to vascular endothelial zinc finger 1 (LOC652537), mRNA.					
Homo sapiens	RefSeq	NM_020727.3	ILMN_308354	ZNF295	NM_001098402.1	NM_001098402.1		49854	148491087	NM_001098402.1	ZNF295	NP_001091872.1	ILMN_1782110	0006060326	S	6928	CTTTCAGTGTATCTCAGCGGGTACTCCAGCTTGTGGCATTCCCATGTGAC	21	-	43407441-43407490	21q22.3a	Homo sapiens zinc finger protein 295 (ZNF295), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZBTB21; DKFZp781N1974	ZBTB21; novel; DKFZp781N1974
Homo sapiens	RefSeq	XM_944736.1	ILMN_41821	LOC651520	XM_944736.1	XM_944736.1		651520	88948807	XM_944736.1	LOC651520	XP_949829.1	ILMN_1701871	0003830441	S	618	AGCCCTGGACCCCTGGGGGCTGGGGAGCGGCGCGCTGGGCTCCGCGCGGC					PREDICTED: Homo sapiens hypothetical protein LOC651520 (LOC651520), mRNA.					
Homo sapiens	Unigene	Hs.200085	ILMN_81561	HS.200085	Hs.200085		Hs.200085		51471760	XM_373587			ILMN_1820327	0004670332	S	617	CACATGCAGTCATGAGCCCAGTCCAGCCTCTGGGACAGAAGATTTCGTGC					PREDICTED: Homo sapiens hypothetical LOC387981 (LOC387981), mRNA					
Homo sapiens	RefSeq	NM_001014372.3	ILMN_25491	SYT14L	NM_001014372.3	NM_001014372.3		401135	148227420	NM_001014372.3	SYT14L	NP_001014394.2	ILMN_3242181	0004850292	S	711	AGGACGGCAAGTACGTAGATGGCAGGCGTTGCTAGAGTCACGATGAATAC	4	-	68610850-68610854:68610855-68610899	4q13.2b	Homo sapiens synaptotagmin XIV-like (SYT14L), mRNA.			Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	sytdep; CHR415SYT	sytdep
Homo sapiens	RefSeq	NM_153274.1	ILMN_8634	BEST4	NM_153274.2	NM_153274.2		266675	119964719	NM_153274.2	BEST4	NP_695006.1	ILMN_1796685	0003370180	S	1737	CAGGTGCACGGTTAGCTTCACAGCAACAGGGAGCTAGGCCATTGGTTCTC	1	-	45249566-45249615	1p34.1d	Homo sapiens bestrophin 4 (BEST4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IC ]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	VMD2L2; MGC126872	MGC126872
Homo sapiens	Unigene	Hs.344169	ILMN_86827	HS.344169	Hs.344169		Hs.344169		3245477	AI028168			ILMN_1890120	0007330082	S	280	CTAAGTAACTGGAAGATGCCGGAGGCTAGCATGGGCCTGTGGGCAGAGGA	15	+	29988828-29988828:29989705-29989753		ov90a09.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1644568 3, mRNA sequence					
Homo sapiens	RefSeq	NM_018322.1	ILMN_16375	C6ORF64	NM_018322.1	NM_018322.1		55776	8922866	NM_018322.1	C6orf64	NP_060792.1	ILMN_1716728	0004210138	S	1747	CCTTTGGCCATTGGGAGTTTGGCTGTCCCTCAGAGCCATCCGGTCAAGCA	6	-	39179941-39179990	6p21.2b	Homo sapiens chromosome 6 open reading frame 64 (C6orf64), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]			DKFZp434H012; FLJ11101	DKFZp434H012; FLJ11101
Homo sapiens	RefSeq	NR_002964.1	ILMN_182882	SNORA28	NR_002964.1	NR_002964.1		677811	91680840	NR_002964.1	SNORA28		ILMN_3235096	0001780008	S	58	GCAAGAAAGTCTAACCTATTCCGGTGTTCTCTCTCCCATGAGACAAGCCG	14	+	102873996-102874045	14q32.32b	Homo sapiens small nucleolar RNA, H/ACA box 28 (SNORA28), small nucleolar RNA.				ACA28	ACA28
Homo sapiens	RefSeq	XM_946074.1	ILMN_31578	LOC651102	XM_946074.1	XM_946074.1		651102	89057454	XM_946074.1	LOC651102	XP_951167.1	ILMN_1680952	0007650192	I	408	AAGGGAGACTGCACCTGACCCTGCACCTCTCACTTATTCTCAATACCCTG					PREDICTED: Homo sapiens similar to Galactoside-binding soluble lectin 13 (Placental tissue protein 13) (Placenta protein 13) (PP13) (Galectin-13), transcript variant 2 (LOC651102), mRNA.					
Homo sapiens	RefSeq	NM_031448.2	ILMN_10211	C19ORF12	NM_001031726.2	NM_001031726.2		83636	110611187	NM_001031726.2	C19orf12	NP_001026896.2	ILMN_1664920	0006380681	I	2019	GCAGTCCTGGAACCCATCCCCCATGGATACTGAGGCATAGCTGTACTGTG	19	-	34883976-34884025	19q12c	Homo sapiens chromosome 19 open reading frame 12 (C19orf12), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP762D096; MGC10922	DKFZP762D096; MGC10922
Homo sapiens	RefSeq	NM_001031726.1	ILMN_10211	C19ORF12	NM_001031726.2	NM_001031726.2		83636	110611187	NM_001031726.2	C19orf12	NP_001026896.2	ILMN_1718365	0006580709	I	213	AGAGGAAGATGAAGGCGGCTGTCAAGCACTCTGGGAAGGGTGCCCTGGTC	19	-	34891058-34891107	19q12c	Homo sapiens chromosome 19 open reading frame 12 (C19orf12), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP762D096; MGC10922	DKFZP762D096; MGC10922
Homo sapiens	RefSeq	NM_001031726.1	ILMN_10211	C19ORF12	NM_001031726.2	NM_001031726.2		83636	110611187	NM_001031726.2	C19orf12	NP_001026896.2	ILMN_1703695	0006370377	A	1215	CTGCCAGGGCCTCGCTCTTCCCATCTGAAAAGTCCTGGTAGTTCTTGAGG	19	-	34884780-34884829	19q12c	Homo sapiens chromosome 19 open reading frame 12 (C19orf12), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP762D096; MGC10922	DKFZP762D096; MGC10922
Homo sapiens	RefSeq	NM_001031726.2	ILMN_10211	C19ORF12	NM_001031726.2	NM_001031726.2		83636	110611187	NM_001031726.2	C19orf12	NP_001026896.2	ILMN_2362439	0004070307	A	3892	GGTTCAAGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTTTGACTACAGT	19	-	34882103-34882152	19q12c	Homo sapiens chromosome 19 open reading frame 12 (C19orf12), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP762D096; MGC10922	DKFZP762D096; MGC10922
Homo sapiens	RefSeq	XM_001722834.1	ILMN_337042	LOC100133090	XM_001722834.1	XM_001722834.1		100133090	169161403	XM_001722834.1	LOC100133090	XP_001722886.1	ILMN_3237461	0000620669	S	985	GCTTATTCTAGGTTCTTTGATTTTCAAATACATTTTGAAACTAGCTTTCA	1	+	146069223-146069272	1q21.1d	PREDICTED: Homo sapiens similar to PDE4DIP protein (LOC100133090), mRNA.					
Homo sapiens	Unigene	Hs.566881	ILMN_119125	HS.566881	Hs.566881		Hs.566881		19763686	BQ028407			ILMN_1912078	0004120112	S	143	AGGGAAGGAGCAAAGGGAGGAAGTCGAGGAGGAAGACGTGGCGGAATCTG	8	-	62181189-62181238		UI-H-CO0-aqy-h-10-0-UI.s1 NCI_CGAP_Sub9 Homo sapiens cDNA clone IMAGE:3106001 3, mRNA sequence					
Homo sapiens	Unigene	Hs.543232	ILMN_106872	HS.543232	Hs.543232		Hs.543232		7375289	AW628499			ILMN_1892184	0006560431	S	218	GCCGCACAAGGAAGGGTAACTGGTGGCAGCTCTTGTCGTTAGAGCTATTC	3	+	20172067-20172116		hi38a02.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2974538 3, mRNA sequence					
Homo sapiens	RefSeq	NM_017737.3	ILMN_162145	FNBP1L	NM_001024948.1	NM_001024948.1		54874	68348708	NM_001024948.1	FNBP1L	NP_001020119.1	ILMN_1754600	0004560092	A	4929	TCCGTAGGAGGCAAGTTCCTTGATGTGGAATAGTGCAACCTGTATATGGG	1	+	93792567-93792616	1p22.1b	Homo sapiens formin binding protein 1-like (FNBP1L), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	C1orf39; TOCA1	C1orf39; TOCA1
Homo sapiens	RefSeq	NM_001024948.1	ILMN_162145	FNBP1L	NM_001024948.1	NM_001024948.1		54874	68348708	NM_001024948.1	FNBP1L	NP_001020119.1	ILMN_1809895	0001010471	I	2687	ACTGTGCAGTCAAGGATTGTGCAGTGCTGGTTGTGTGACCACACCCTGAG	1	+	93790325-93790374	1p22.1b	Homo sapiens formin binding protein 1-like (FNBP1L), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	C1orf39; TOCA1	C1orf39; TOCA1
Homo sapiens	RefSeq	NM_003985.1	ILMN_16006	TNK1	NM_003985.1	NM_003985.1		8711	4507610	NM_003985.1	TNK1	NP_003976.1	ILMN_1724096	0001050719	S	2674	GACTAGCCCCTGCTCCAGCCCAGTTCTCACATTCCCCTTTGTTTTTTCCC	17	+	7233685-7233734	17p13.1d	Homo sapiens tyrosine kinase, non-receptor, 1 (TNK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10873601] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10873601] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 10873601] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 10873601] [evidence NAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8632913] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10873601] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10873601] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC46193	MGC46193
Homo sapiens	RefSeq	NM_194313.1	ILMN_25612	KIF24	NM_194313.2	NM_194313.2		347240	154426305	NM_194313.2	KIF24	NP_919289.2	ILMN_1694126	0002370546	S	5819	GCCTATCCCAACTCCACAGTCAGGAAGGCCTACGTCCTTGGTCCACAGAC	9	-	34254371-34254377:34253099-34253141	9p13.3c	Homo sapiens kinesin family member 24 (KIF24), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	C9orf48; MGC125677; FLJ10933; FLJ43884; MGC125678; bA571F15.4	MGC125677; FLJ43884; MGC125678
Homo sapiens	RefSeq	NM_003881.2	ILMN_7098	WISP2	NM_003881.2	NM_003881.2		8839	18491001	NM_003881.2	WISP2	NP_003872.1	ILMN_1812461	0004120553	S	1142	AAGGTGTCCAGGGTCCTCTAGCCCACTCCCTGCCTACACACACAGCCTAT	20	+	42789604-42789653	20q13.12a	Homo sapiens WNT1 inducible signaling pathway protein 2 (WISP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9843955] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9843955] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9843955] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	CTGF-L; CT58; CCN5	CTGF-L; CT58; CCN5
Homo sapiens	RefSeq	NM_173549.1	ILMN_183112	C8ORF47	NM_173549.1	NM_173549.1		203111	27734896	NM_173549.1	C8orf47	NP_775820.1	ILMN_2135709	0002060338	S	1239	CAGGAGAAGTGGTGGACCTTTCAGCAGCCACATAGATAGAAGAGTGAACC	8	+	99105527-99105561:99105562-99105576	8q22.2a	Homo sapiens chromosome 8 open reading frame 47 (C8orf47), mRNA.				FLJ39553	FLJ39553
Homo sapiens	RefSeq	NM_003954.1	ILMN_165779	MAP3K14	NM_003954.2	NM_003954.2		9020	115298644	NM_003954.2	MAP3K14	NP_003945.2	ILMN_1724070	0006400369	S	4129	AAGAATAGCACCCCCTTCCCCATTGCCCCAGCTTAGCCTCTTCTCCCAGG	17	-	43340776-43340825	17q21.31d	Homo sapiens mitogen-activated protein kinase kinase kinase 14 (MAP3K14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12874243] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286467] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11035039] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10094049] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10733566] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12874243] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286467] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10733566] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9520446] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022362] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FTDCR1B; HSNIK; HS; NIK	FTDCR1B; HSNIK; HS; NIK
Homo sapiens	RefSeq	XM_378454.3	ILMN_39212	LOC283547	XM_378454.3	XM_378454.3		283547	89037316	XM_378454.3	LOC283547	XP_378454.2	ILMN_1661461	0001230563	A	4193	GCCTCATGTCTCTGCAGGGTGGACATAGCTCTAACTCTCTGAAGCTGAGT	14	-	38299200-38299203:38301057-38301102	14q21.1b	PREDICTED: Homo sapiens hypothetical protein LOC283547 (LOC283547), mRNA.					
Homo sapiens	RefSeq	XM_946076.1	ILMN_32069	LOC654172	XM_946076.1	XM_946076.1		654172	88999073	XM_946076.1	LOC654172	XP_951169.1	ILMN_1745957	0006200474	A	365	TTGGAGCAGTAGCAAGACACGAATATACAGTTATTGGCCCAAAAGTGAGT					PREDICTED: Homo sapiens similar to soluble adenylyl cyclase, transcript variant 2 (LOC654172), mRNA.					
Homo sapiens	RefSeq	XM_934628.1	ILMN_180174	LOC729260	XM_001129783.1	XM_001129783.1		729260	113413143	XM_001129783.1	LOC729260	XP_001129783.1	ILMN_1693665	0002570059	A	54	CCTCAGTAAATCCTGACTGCCATGTAACTGTGTACTGTGCTGCTGAGCTC	2	-	110665053-110665102	2q13b	PREDICTED: Homo sapiens similar to LIM and senescent cell antigen-like domains 1 (LOC729260), mRNA.					
Homo sapiens	RefSeq	XM_926976.1	ILMN_35658	LOC643672	XM_926976.1	XM_926976.1		643672	89035766	XM_926976.1	LOC643672	XP_932069.1	ILMN_1768217	0006560736	S	276	GACTTTGGCCTACAGTTCCATTGGAATCAAACCCGACTGGATCGCAGCAT	12	+	121001541-121001555:121003071-121003105		PREDICTED: Homo sapiens similar to mondoA (LOC643672), mRNA.					
Homo sapiens	RefSeq	NM_173521.2	ILMN_17236	C9ORF84	NM_173521.2	NM_173521.2		158401	75677386	NM_173521.2	C9orf84	NP_775792.2	ILMN_1731370	0003800754	S	4912	ACACCCCTGCACACAGGCCATTTAAATGAGTCTCCATCACAGTCTGACCC	9	-	113488581-113488630	9q31.3b	Homo sapiens chromosome 9 open reading frame 84 (C9orf84), mRNA.				MGC43661; FLJ44067; FLJ32779	MGC43661; FLJ44067; FLJ32779
Homo sapiens	RefSeq	NM_001012393.1	ILMN_18270	OPCML	NM_001012393.1	NM_001012393.1		4978	59939899	NM_001012393.1	OPCML	NP_001012393.1	ILMN_1741698	0002970070	A	6066	ATGACTTATCAATGGTGCCGTTATAGCTGTGTCAGACAATGGGTGTGCCC	11	-	132285502-132285551	11q25b-q25d	Homo sapiens opioid binding protein/cell adhesion molecule-like (OPCML), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1333602] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1333602] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7721093] [evidence TAS]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [pmid 7891157] [evidence TAS]	Combining with an opioid, any narcotic derived from or resembling opium, to initiate a change in cell activity [goid 4985] [pmid 1333602] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OBCAM; OPCM	OBCAM; OPCM
Homo sapiens	RefSeq	XM_944532.1	ILMN_37862	LOC651166	XM_944532.1	XM_944532.1		651166	89028605	XM_944532.1	LOC651166	XP_949625.1	ILMN_1751846	0001570706	S	103	ATTGGACAAAGACTTGCAGAAGGGGAACACCAGACAGCGCTGGAGCCCAA					PREDICTED: Homo sapiens hypothetical protein LOC651166 (LOC651166), mRNA.					
Homo sapiens	RefSeq	NM_002134.2	ILMN_19599	HMOX2	NM_002134.2	NM_002134.2		3163	8051607	NM_002134.2	HMOX2	NP_002125.3	ILMN_1658807	0004230347	S	1430	TACAACTTCTGGGCCTCTCTTGGACCCTGGGAGTGAGGGTGGGTGTGGGT	16	+	4500153-4500202	16p13.3b	Homo sapiens heme oxygenase (decycling) 2 (HMOX2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15528406] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 15528406] [evidence IDA];  [goid 6788] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: heme + 3 donor-H2 + 3 O2 = biliverdin + Fe2+ + CO + 3 acceptor + 3 H2O [goid 4392] [pmid 1575508] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15528406] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 1575508] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HO-2	HO-2
Homo sapiens	RefSeq	NM_002200.3	ILMN_307729	IRF5	NM_001098631.1	NM_001098631.1		3663	148833514	NM_001098631.1	IRF5	NP_001092101.1	ILMN_1670576	0004260373	A	2205	GGCCTGGCTTCTGGGCTGATGGGTCAGTTGGGCCTTCATAAACACTCACC	7	+	128376806-128376855	7q32.1a	Homo sapiens interferon regulatory factor 5 (IRF5), transcript variant 7, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Homo sapiens	RefSeq	NM_020199.1	ILMN_23157	C5ORF15	NM_020199.1	NM_020199.1		56951	9910277	NM_020199.1	C5orf15	NP_064584.1	ILMN_1695917	0003420692	S	2174	AGCTGGAAGAAGGCCGTCCATCCTGTCTCTTGGGCGGACAGTGTACTTTC	5	-	133319226-133319275	5q31.1d	Homo sapiens chromosome 5 open reading frame 15 (C5orf15), mRNA.				HTGN29; KCT2	HTGN29; KCT2
Homo sapiens	RefSeq	XM_001722443.1	ILMN_350149	LOC100131031	XM_001722443.1	XM_001722443.1		100131031	169168627	XM_001722443.1	LOC100131031	XP_001722495.1	ILMN_3216699	0007040427	A	2664	GCAGACTGACATTTGTGCGGGGCTGGGGTTGGAAATGGGTAGTAACTGCT				6p21.2b	PREDICTED: Homo sapiens similar to hCG2041190 (LOC100131031), mRNA.					
Homo sapiens	RefSeq	XM_001722443.1	ILMN_350149	LOC100131031	XM_001722443.1	XM_001722443.1		100131031	169168627	XM_001722443.1	LOC100131031	XP_001722495.1	ILMN_3293210	0005360377	M	3125	GGAGGTCCAGCATTTCCTCTCATCCTTTTGTCTGGCAATCAGCGTTTGGG				6p21.2b	PREDICTED: Homo sapiens similar to hCG2041190 (LOC100131031), mRNA.					
Homo sapiens	RefSeq	NR_030329.1	ILMN_388056	MIR599	NR_030329.1	NR_030329.1		693184	262205985	NR_030329.1	MIR599		ILMN_3308813	0000650471	S	3	GACATGCTGTCCACAGTGTGTTTGATAAGCTGACATGGGACAGGGATTCT				8q22.2b	Homo sapiens microRNA 599 (MIR599), microRNA.					
Homo sapiens	RefSeq	NM_024644.1	ILMN_4108	C14ORF169	NM_024644.2	NM_024644.2		79697	106879205	NM_024644.2	C14orf169	NP_078920.2	ILMN_1711543	0006510634	S	2346	TGGATCTTTCATCTGAGTTCTTTTTCATGGGCGGGTCGGGGTCAGTATCC	14	+	73029742-73029791	14q24.3a	Homo sapiens chromosome 14 open reading frame 169 (C14orf169), mRNA.				FLJ21802	FLJ21802
Homo sapiens	RefSeq	NM_182648.1	ILMN_24991	BAZ1A	NM_182648.1	NM_182648.1		11177	32967604	NM_182648.1	BAZ1A	NP_872589.1	ILMN_1742230	0000940288	A	5616	CCTTGAAGTGCTGTACCAGTGCTGGCTGCAGGTATTAAGTCCAAGTTTAT	14	-	35222191-35222240	14q13.2a	Homo sapiens bromodomain adjacent to zinc finger domain, 1A (BAZ1A), transcript variant 2, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	WALp1; hACF1; DKFZP586E0518; FLJ14383; ACF1; WCRF180	WALp1; hACF1; FLJ14383; DKFZP586E0518; ACF1; WCRF180
Homo sapiens	RefSeq	NM_001010877.2	ILMN_13954	ZNF311	NM_001010877.2	NM_001010877.2		282890	72384334	NM_001010877.2	ZNF311	NP_001010877.2	ILMN_1687827	0000270228	S	2443	GGGAGTAGGAAATCCCTCTCTCCAGTGACTGTTTCTCAGACCTCAGTAGT	6	-	29070778-29070827	6p22.1a	Homo sapiens zinc finger protein 311 (ZNF311), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	zf31	zf31
Homo sapiens	RefSeq	XM_945656.1	ILMN_307235	SRL	NM_001098814.1	NM_001098814.1		6345	149363671	NM_001098814.1	SRL	NP_001092284.1	ILMN_1736692	0002100059	A	4097	AGAGATTCCCCCAAGAGGAGTGTCTGGAAGGATCTGTGCCTGGACAGTGG	16	-	4239442-4239491	16p13.3c-p13.3b	Homo sapiens sarcalumenin (SRL), mRNA.	The volume enclosed by the membranes of the sarcoplasmic reticulum [goid 33018] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	XM_926378.1	ILMN_38822	LOC653125	XM_926378.2	XM_926378.2		653125	113425133	XM_926378.2	LOC653125	XP_931471.1	ILMN_1683163	0006980408	I	955	CTACTGAAAGTGCAGCTGACACAGTTGAAGGAGTCTTTTCAACAAGTCCA	15	-	30476777-30476803:30476910-30476932	15q13.3c	PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a, 8A, transcript variant 1 (LOC653125), mRNA.					
Homo sapiens	Unigene	Hs.209202	ILMN_82076	HS.209202	Hs.209202		Hs.209202		27844925	BX101489			ILMN_1868908	0003400341	S	277	AGAGCCATTGAGCAGAACACCCAGCCACCAATGCCCTTCTGTGATTTCCC	12	+	62506405-62506454		BX101489 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998O165825, mRNA sequence					
Homo sapiens	RefSeq	XM_945200.1	ILMN_44754	LOC652094	XM_945200.1	XM_945200.1		652094	89037905	XM_945200.1	LOC652094	XP_950293.1	ILMN_1679274	0001190309	S	1133	TTGTCAAGGCTGAACCATCCGCGGGCAGCTGGGACCAGGGAACATGGTGA					PREDICTED: Homo sapiens hypothetical protein LOC652094 (LOC652094), mRNA.					
Homo sapiens	RefSeq	NM_152262.1	ILMN_2860	ZNF439	NM_152262.2	NM_152262.2		90594	142377954	NM_152262.2	ZNF439	NP_689475.1	ILMN_1792972	0006650672	S	2316	CGTCAGATCAGCCTCAAGACTTCAAATGCATGGAAGCACTCACACTTGGC	19	+	11841072-11841121	19p13.2a	Homo sapiens zinc finger protein 439 (ZNF439), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp571K0837	DKFZp571K0837
Homo sapiens	RefSeq	XM_938696.1	ILMN_39286	LOC645652	XM_928668.2	XM_928668.2		645652	113403804	XM_928668.2	LOC645652	XP_933761.1	ILMN_1659511	0005820040	S	127	GCTTGGTCCCTCCGCCGTCAGTAATGTCCAGCTTCACTCAGGCCGCTCAC	1	-	16441873-16441922	1p36.13f	PREDICTED: Homo sapiens hypothetical LOC645652 (LOC645652), mRNA.					
Homo sapiens	RefSeq	XM_944649.1	ILMN_46115	LOC651403	XM_944649.1	XM_944649.1		651403	88957169	XM_944649.1	LOC651403	XP_949742.1	ILMN_1799640	0002480382	S	889	AGACTCGCTCCCAGAGCCCTCGCTGGCCTGAACCAACACACTAGGGCCCA					PREDICTED: Homo sapiens hypothetical protein LOC651403 (LOC651403), mRNA.					
Homo sapiens	Unigene	Hs.10862	ILMN_71180	HS.10862	Hs.10862		Hs.10862		10439954	AK026966			ILMN_1843198	0001940563	S	2302	GTGTTTATGATGAGTCAGAGTGCTTTTCCTCGGTGGGACAGTTGCTGGCC	1	+	65470200-65470249		Homo sapiens cDNA: FLJ23313 fis, clone HEP11919					
Homo sapiens	Unigene	Hs.583585	ILMN_135766	HS.583585	Hs.583585		Hs.583585		83104939	DB336375			ILMN_1904641	0004920626	S	325	TAGCAGCCTGAGGAGGCAGGGGCTGGAGAGAAGGTCAAAGGCAAAGGGCA	8	+	136753066-136753115		DB336375 TESTI2 Homo sapiens cDNA clone TESTI2006170 3, mRNA sequence					
Homo sapiens	RefSeq	NR_003068.1	ILMN_168626	SNORD88B	NR_003068.1	NR_003068.1		692203	96974944	NR_003068.1	SNORD88B		ILMN_3236097	0001500598	S	1	TTGGGGACCCCGTGATGTCCAGCACTGGGCTCTGACTGCCCCTGAGGACA	19	-	55994144-55994193	19q13.33c	Homo sapiens small nucleolar RNA, C/D box 88B (SNORD88B), small nucleolar RNA.				HBII-180B	HBII-180B
Homo sapiens	RefSeq	NM_030670.1	ILMN_174600	PTPRO	NM_030667.1	NM_030667.1		5800	13677213	NM_030667.1	PTPRO	NP_109592.1	ILMN_1720113	0001660386	A	5103	TTGAGTTGAAAGTAAACACAAGCTGGCTGCTTCCCTGTGGCAACTGTGGC	12	+	15641029-15641078	12p12.3e	Homo sapiens protein tyrosine phosphatase, receptor type, O (PTPRO), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10498613] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7665166] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 10498613] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 7753550] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 10498613] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5001] [pmid 7665166] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	GLEPP1; PTP-U2; PTPU2	GLEPP1; PTP-U2; PTPU2
Homo sapiens	RefSeq	NM_007229.2	ILMN_18449	PACSIN2	NM_007229.2	NM_007229.2		11252	148747350	NM_007229.2	PACSIN2	NP_009160.2	ILMN_3307772	0003440477	S	1851	ACCTTTCCGAGTGCAGCTGGAGGGATCTGAGCGCAGGAAGACGCAGAACA	22	-	43267145-43267194	22q13.2c	Homo sapiens protein kinase C and casein kinase substrate in neurons 2 (PACSIN2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10431838] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10431838] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10431838] [evidence TAS]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	SDPII	
Homo sapiens	RefSeq	NM_001018096.1	ILMN_5324	GCOM1	NM_001018096.1	NM_001018096.1		145781	70166470	NM_001018096.1	Gcom1	NP_001018106.1	ILMN_1746635	0006520707	I	1771	CCATGAAGGGATCCATGGTGCTTGCAAGATGGTGAAGAAATGGAGTCAGA	15	+	55780382-55780431	15q21.3d	Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 7, mRNA.				Gup2; Gup1; MGC126694; GRINL1A; Gcom2; FLJ30973	Gup2; Gup1; MGC126694; GRINL1A; Gcom2; FLJ30973
Homo sapiens	RefSeq	NR_003369.2	ILMN_366071	RRN3P2	NR_003369.2	NR_003369.2		653390	194239679	NR_003369.2	RRN3P2		ILMN_3246274	0001400187	S	2077	CGCAGCTTAGTGGCTCAGTTTGCTGGAGATGCGCAGTGTCTGCCTCAGCA	16	+	29127719-29127768	16p11.2d	Homo sapiens RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2 (RRN3P2), non-coding RNA.					
Homo sapiens	RefSeq	NM_001005473.1	ILMN_23362	PLCXD3	NM_001005473.1	NM_001005473.1		345557	53828919	NM_001005473.1	PLCXD3	NP_001005473.1	ILMN_1798841	0003440598	S	7288	CTGGAGGATGGGAATTTGCAGAGCTGGTGACATTTCCTTCATTAGACACC	5	-	41343016-41343065	5p13.1a	Homo sapiens phosphatidylinositol-specific phospholipase C, X domain containing 3 (PLCXD3), mRNA.					
Homo sapiens	RefSeq	NM_001080404.1	ILMN_168720	ZNF878	NM_001080404.1	NM_001080404.1		729747	122937200	NM_001080404.1	ZNF878	NP_001073873.1	ILMN_3249439	0005490079	S	1358	CTGCCTCAGTCCTTCAAAAGCACATACGAACTCACACAGGAGAGAAACCC	19	-	12154949-12154998	19p13.2a	Homo sapiens zinc finger protein 878 (ZNF878), mRNA.					
Homo sapiens	RefSeq	NM_000506.3	ILMN_356982	F2	NM_000506.3	NM_000506.3		2147	169808403	NM_000506.3	F2	NP_000497.1	ILMN_3249291	0004560273	S	1702	CAAGCCTGATGAAGGGAAACGAGGGGATGCCTGTGAAGGTGACAGTGGGG	11	+	46760602-46760651	11p11.2b	Homo sapiens coagulation factor II (thrombin) (F2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14982929] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2538457] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2742826] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2866798] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12907439] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3242619] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 2719946] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2538457] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12907439] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 7507931] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10692450] [evidence TAS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 10692450] [evidence TAS]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 1672265] [evidence IDA]; The process of introducing a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 7260] [pmid 10692450] [evidence TAS]; The transport of dimerized STAT (Signal Transducers and Activators of Transcription) proteins into the nucleus following activation by members of the janus activated kinase (JAK) family of tyrosine kinases [goid 7262] [pmid 10692450] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9639571] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 12855810] [evidence TAS]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [pmid 12855810] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of blood coagulation [goid 30194] [pmid 9038223] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals [goid 32967] [pmid 9639571] [evidence IDA]; An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [pmid 12855810] [evidence IDA]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [pmid 1672265] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 12855810] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 12855810] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	NM_022357.1	ILMN_22214	DPEP3	NM_022357.1	NM_022357.1		64180	11641272	NM_022357.1	DPEP3	NP_071752.1	ILMN_1731275	0003840519	S	1564	CGCAGAGGTCACTGTGGCAAAGCCTCACAAAGCCCCCTCTCCTAGTTCAT	16	-	66567105-66567154	16q22.1b	Homo sapiens dipeptidase 3 (DPEP3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]	MBD3	MBD3
Homo sapiens	RefSeq	NM_016147.1	ILMN_17607	PPME1	NM_016147.1	NM_016147.1		51400	7706644	NM_016147.1	PPME1	NP_057231.1	ILMN_1732772	0000830411	S	2252	ACGCCATTTCCAAGGGCAGGAAGGGGCAGTGTCCTGAAGCCCATCTTTTC	11	+	73643195-73643244	11q13.4c	Homo sapiens protein phosphatase methylesterase 1 (PPME1), mRNA.		The removal of a methyl group, from a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6482] [pmid 10318862] [evidence IDA]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [pmid 10318862] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10318862] [evidence IDA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 10318862] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with the enzyme protein phosphatase 2A [goid 51721] [pmid 10318862] [evidence IDA]; Catalysis of the reaction: C-terminal protein amino acid methyl ester + H2O = protein amino acid + methanol [goid 51722] [pmid 10318862] [evidence IDA]	FLJ22226; PME-1	FLJ22226; PME-1
Homo sapiens	RefSeq	XM_939680.1	ILMN_37621	LOC650594	XM_939680.1	XM_939680.1		650594	89061385	XM_939680.1	LOC650594	XP_944773.1	ILMN_1745914	0000630451	S	120	TTTGCGATGCTGCCTGGGATCGGAGCCGCACAACCTGTCCTCATTGCTCT					PREDICTED: Homo sapiens similar to acetylserotonin O-methyltransferase (LOC650594), mRNA.					
Homo sapiens	RefSeq	NM_006610.2	ILMN_8128	MASP2	NM_006610.2	NM_006610.2		10747	21264362	NM_006610.2	MASP2	NP_006601.2	ILMN_1709408	0007040398	I	2123	GCCTGTGAAGACCTTGGCAGCGACGTGGCTCGAGAAGCATTCATCATTAC	1	-	11086851-11086900	1p36.22b	Homo sapiens mannan-binding lectin serine peptidase 2 (MASP2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10639434] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10925294] [evidence EXP]	Any process involved in the activation of any of the steps of the lectin pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 1867] [pmid 11532276] [evidence EXP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 9087411] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	sMAP; MASP-2; MAP19	sMAP; MASP-2; MAP19
Homo sapiens	RefSeq	NM_139208.1	ILMN_8128	MASP2	NM_006610.2	NM_006610.2		10747	21264362	NM_006610.2	MASP2	NP_006601.2	ILMN_1735260	0005290458	A	388	AACGAGAAGCCGTTCACGGGGTTCGAGGCCTTCTATGCAGCCGAGGACAT	1	-	11105592-11105596:11106613-11106657	1p36.22b	Homo sapiens mannan-binding lectin serine peptidase 2 (MASP2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10639434] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10925294] [evidence EXP]	Any process involved in the activation of any of the steps of the lectin pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 1867] [pmid 11532276] [evidence EXP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 9087411] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	sMAP; MASP-2; MAP19	sMAP; MASP-2; MAP19
Homo sapiens	RefSeq	XR_015588.2	ILMN_184104	LOC728707	XR_015588.2	XR_015588.2		728707	169167568	XR_015588.2	LOC728707		ILMN_3302248	0002000253	M	1084	GAGGAGCAACTCTGGCAGGAACCAATTTAGAGAACTGTGATCTGTCTGGG	5	-	37541645-37541694	5p13.2a	PREDICTED: Homo sapiens misc_RNA (LOC728707), miscRNA.					
Homo sapiens	RefSeq	XM_001721464.1	ILMN_339533	LOC729933	XM_001721464.1	XM_001721464.1		729933	169160862	XM_001721464.1	LOC729933	XP_001721516.1	ILMN_3239293	0000730615	S	272	ACGCTTTGATGGTGACAGGAATGCATGTGTCAACCGTGGATCAAGAGAAG					PREDICTED: Homo sapiens similar to guanylate-binding protein 5 (LOC729933), mRNA.					
Homo sapiens	RefSeq	NM_014283.2	ILMN_9240	C1ORF9	NM_014283.2	NM_014283.2		51430	29837653	NM_014283.2	C1orf9	NP_055098.1	ILMN_1742324	0004780349	A	5417	GTCCAGATGAGAGCAGAGATACAGTGAGAAATTATGTGATCTGTGTGTTG	1	+	170847455-170847504	1q24.3d	Homo sapiens chromosome 1 open reading frame 9 (C1orf9), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			CH1	CH1
Homo sapiens	RefSeq	NM_014283.2	ILMN_9240	C1ORF9	NM_014283.2	NM_014283.2		51430	29837653	NM_014283.2	C1orf9	NP_055098.1	ILMN_2253272	0002350373	I	398	ATGAAAGAGAGGGACCTATCAATGCCGAATCATTGGGAAAATCAGGTTCA	1	+	170789024-170789073	1q24.3d	Homo sapiens chromosome 1 open reading frame 9 (C1orf9), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			CH1	CH1
Homo sapiens	RefSeq	XM_932176.1	ILMN_40314	LOC644421	XM_932176.1	XM_932176.1		644421	89027719	XM_932176.1	LOC644421	XP_937269.1	ILMN_1712784	0003360576	S	293	ACTCAGGGTCACAGAAGCTCAACCGTGTCCATTGGAAAGGCTCTTACTCG	8	+	1197141-1197190		PREDICTED: Homo sapiens hypothetical protein LOC644421 (LOC644421), mRNA.					
Homo sapiens	RefSeq	NM_004858.1	ILMN_42846	SLC4A8	NM_004858.2	NM_004858.2		9498	90568033	NM_004858.2	SLC4A8	NP_004849.2	ILMN_1738300	0006200196	S	3905	GTAATTCCAGGGCTTTTGGGAGTTGAAGCTGGAGGATTACTTGAGGCCAG	12	+	50177821-50177870	12q13.13c	Homo sapiens solute carrier family 4, sodium bicarbonate cotransporter, member 8 (SLC4A8), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA];  [goid 5452] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	DKFZp761B2318; NBC3; FLJ46462	DKFZp761B2318; NBC3; FLJ46462
Homo sapiens	RefSeq	XM_938670.1	ILMN_181627	C1ORF117	XM_001129031.1	XM_001129031.1		348487	113411954	XM_001129031.1	C1orf117	XP_001129031.1	ILMN_1679816	0000940348	I	5	AGAAGGCCCTGAGCATGTTTTCCGATGACTTTGGCAGCTTCATGCGGCCC				1p36.13f	PREDICTED: Homo sapiens chromosome 1 open reading frame 117 (C1orf117), mRNA.					
Homo sapiens	RefSeq	NM_003313.2	ILMN_20146	TSTA3	NM_003313.2	NM_003313.2		7264	6598326	NM_003313.2	TSTA3	NP_003304.1	ILMN_1697777	0002350661	S	986	GACAACTACGAGCAGGCCCGGAAGTGAAGCTGGAAGACAGGATCAGGTGC	8	-	144766166-144766215	8q24.3g	Homo sapiens tissue specific transplantation antigen P35B (TSTA3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11698403] [evidence IC ]	The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 11698403] [evidence NAS]; The chemical reactions and pathways involving nucleotide-sugars, any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 9225] [pmid 9525924] [evidence TAS]; The chemical reactions and pathways resulting in the formation of GDP-L-fucose from GDP-D-mannose via GDP-4-dehydro-6-deoxy-D-mannose, requiring the functions of GDP-mannose 4,6-dehydratase (EC:4.2.1.47) and GDP-L-fucose synthase (EC:1.1.1.271) [goid 42351] [pmid 11698403] [evidence TAS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8910301] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: GDP-6-deoxy-D-mannose + NAD(P)+ = GDP-4-dehydro-6-deoxy-D-mannose + NAD(P)H + H+. In the reverse reaction, a mixture of GDP-D-rhamnose and its C-4 epimer is formed [goid 42356] [pmid 11698403] [evidence TAS]; Catalysis of the reaction: GDP-L-fucose + NAD+ = GDP-4-dehydro-6-deoxy-D-mannose + NADH + H+ [goid 50577] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	FX; P35B	FX; P35B
Homo sapiens	RefSeq	XM_943636.1	ILMN_43355	FLJ32255	XM_943640.2	XM_943640.2		643977	113417031	XM_943640.2	FLJ32255	XP_948733.1	ILMN_1794510	0005670682	A	1192	TGATCCGAAGGAGGAGTGGCGCTGGGCGCTGGACTCGCTGGTGTGAAAAT				5p12c	PREDICTED: Homo sapiens hypothetical protein LOC643977, transcript variant 2 (FLJ32255), mRNA.					
Homo sapiens	RefSeq	XM_928075.1	ILMN_37869	LOC643287	XM_928075.2	XM_928075.2		643287	113423219	XM_928075.2	LOC643287	XP_933168.1	ILMN_1677906	0000730142	A	166	GTAGACACCAGCTCCGAAATCACCACCGAGGACTTAAAGGAGAAGAAGGA	12	+	12155379-12155428	12p13.2a	PREDICTED: Homo sapiens similar to prothymosin alpha, transcript variant 1 (LOC643287), mRNA.					
Homo sapiens	RefSeq	NM_001007243.1	ILMN_1991	STAR	NM_001007243.1	NM_001007243.1		6770	56117847	NM_001007243.1	STAR	NP_001007244.1	ILMN_2391178	0007040224	A	2574	AGGCAATCACCTGAGGGCAGGAGACCAGCCTGACTAACATGGAGAAACCC	8	-	38119392-38119441	8p12a	Homo sapiens steroidogenic acute regulatory protein (STAR), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 16973755] [evidence EXP]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 15897605] [evidence EXP]	The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 8211] [evidence IEA]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 8211] [evidence IEA]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IEA]	Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]	STARD1	STARD1
Homo sapiens	RefSeq	NM_001007243.1	ILMN_1991	STAR	NM_001007243.1	NM_001007243.1		6770	56117847	NM_001007243.1	STAR	NP_001007244.1	ILMN_2391176	0000020750	A	2497	TTCCCTTTCCCAGGAGTCAAGAGAATTTATGTGAGGTGGCTCCCGCCTGT	8	-	38119469-38119518	8p12a	Homo sapiens steroidogenic acute regulatory protein (STAR), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 16973755] [evidence EXP]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 15897605] [evidence EXP]	The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 8211] [evidence IEA]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving glucocorticoids, hormonal C21 corticosteroids synthesized from cholesterol. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 8211] [evidence IEA]; The chemical reactions and pathways involving lipids, as carried out by individual cells [goid 44255] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [evidence IEA]	Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]	STARD1	STARD1
Homo sapiens	RefSeq	XM_496527.2	ILMN_42229	FLJ20464	XM_496527.2	XM_496527.2		54944	89058950	XM_496527.2	FLJ20464	XP_496527.2	ILMN_1702757	0006110402	A	634	GAGGCAGCGAAGTATGTGTTCCAAACTTTCCACGGTTCCAAACTGAGCGC	22	+	30073511-30073560	22q12.2c	PREDICTED: Homo sapiens hypothetical protein FLJ20464 (FLJ20464), mRNA.					
Homo sapiens	RefSeq	XM_001718370.1	ILMN_334286	LOC100130555	XM_001718370.1	XM_001718370.1		100130555	169205580	XM_001718370.1	LOC100130555	XP_001718422.1	ILMN_3252339	0000630719	M	167	GGATCTGCACATCACCCACCTTCCAGTGGCCCAAGATACTGCAGCTCCAG				12q21.32a	PREDICTED: Homo sapiens similar to hCG1646587 (LOC100130555), mRNA.					
Homo sapiens	RefSeq	NM_004118.3	ILMN_166005	FOXS1	NM_004118.3	NM_004118.3		2307	34304365	NM_004118.3	FOXS1	NP_004109.1	ILMN_1811790	0003610102	S	1156	CAGCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGG	20	-	30432215-30432264	20q11.21b	Homo sapiens forkhead box S1 (FOXS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9325056] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC4544; FREAC10	MGC4544; FREAC10
Homo sapiens	RefSeq	NM_024885.2	ILMN_13817	TAF7L	NM_024885.2	NM_024885.2		54457	51477717	NM_024885.2	TAF7L	NP_079161.2	ILMN_1755638	0002470500	S	2021	CTGTTCAGGTAACAGGACTGCATTCCTGCTCAAGGATGATTCCTTGCTGC	X	-	100523511-100523560	Xq22.1c	Homo sapiens TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa (TAF7L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [evidence IEA]	TAF2Q; dJ738A13.1; FLJ23157	TAF2Q; dJ738A13.1; FLJ23157
Homo sapiens	RefSeq	NM_000890.3	ILMN_13852	KCNJ5	NM_000890.3	NM_000890.3		3762	24797140	NM_000890.3	KCNJ5	NP_000881.3	ILMN_1772224	0001260484	S	2238	TGACTCTTAGAAGGTGGCCTGGGACTAGACAGCCCCTCTGAGCACATGCA	11	+	128292500-128292549	11q24.3a	Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 5 (KCNJ5), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8834003] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8834003] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 15273] [pmid 8834003] [evidence TAS];  [goid 15467] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KIR3.4; CIR; KATP1; GIRK4	KIR3.4; CIR; KATP1; GIRK4
Homo sapiens	RefSeq	NM_032458.2	ILMN_10866	PHF6	NM_032458.2	NM_032458.2		84295	62865859	NM_032458.2	PHF6	NP_115834.1	ILMN_1714749	0004890059	I	1504	TCTGCTTTATCAATAAGTGTAGTTGTAATGTCAAATCAATAAGATATTCA	X	+	133387230-133387279	Xq26.2b	Homo sapiens PHD finger protein 6 (PHF6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BORJ; MGC14797	MGC14797; BORJ
Homo sapiens	RefSeq	XM_928783.1	ILMN_37499	LOC645783	XM_928783.1	XM_928783.1		645783	89059841	XM_928783.1	LOC645783	XP_933876.1	ILMN_1661608	0006100368	S	181	TCCCGCCGTTACCAGGACGACCGTCTCCCCGCAGCCCAGGCTGCCCGGAC	X	-	70854733-70854782		PREDICTED: Homo sapiens hypothetical protein LOC645783 (LOC645783), mRNA.					
Homo sapiens	RefSeq	XM_941125.1	ILMN_40941	LOC649447	XM_941125.1	XM_941125.1		649447	88999345	XM_941125.1	LOC649447	XP_946218.1	ILMN_1811063	0005420750	S	537	ACCCCTGGGCTACCATCTGCATGGGGCTGGGGTCCTCCTGTGCTATTTGT					PREDICTED: Homo sapiens similar to 60S ribosomal protein L29 (Cell surface heparin binding protein HIP) (LOC649447), mRNA.					
Homo sapiens	RefSeq	XM_943133.1	ILMN_45861	LOC647941	XM_943133.1	XM_943133.1		647941	89038843	XM_943133.1	LOC647941	XP_948226.1	ILMN_1703280	0003780037	S	407	GCGGGCCCCCTGGAATTGATGGGTATAGATGGTGACCCCGGAGGAAAATT					PREDICTED: Homo sapiens hypothetical protein LOC647941 (LOC647941), mRNA.					
Homo sapiens	RefSeq	NM_001002911.1	ILMN_6038	GPR139	NM_001002911.2	NM_001002911.2		124274	93352552	NM_001002911.2	GPR139	NP_001002911.1	ILMN_1803218	0006290767	S	1004	ACTTCTTCCTCTACTGCTTCATCAGCAAGCGGTTCCGCACCATGGCAGCC	16	-	20043227-20043276	16p12.3a	Homo sapiens G protein-coupled receptor 139 (GPR139), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	GPRg1; PGR3	GPRg1; PGR3
Homo sapiens	RefSeq	XM_932323.1	ILMN_43936	LOC644715	XM_932323.1	XM_932323.1		644715	88997760	XM_932323.1	LOC644715	XP_937416.1	ILMN_1697857	0005890408	S	61	CTTAACTGTGAATAAGACCTAGTTCAACATGGAACTTCCTGGTGGCCAAG	6	-	126107756-126107778:126107779-126107805		PREDICTED: Homo sapiens hypothetical protein LOC644715 (LOC644715), mRNA.					
Homo sapiens	RefSeq	NM_173044.1	ILMN_10368	IL18BP	NM_173044.1	NM_173044.1		10068	27502399	NM_173044.1	IL18BP	NP_766632.1	ILMN_1725809	0005270440	I	1664	CCAAGGCTTGGTGGCCAACACCCAGAGGAACAAATTAAGGACCGGGAATT	11	+	71394317-71394366	11q13.4a	Homo sapiens interleukin 18 binding protein (IL18BP), transcript variant D, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10023777] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [pmid 10023777] [evidence IDA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with interleukin-18 [goid 42007] [pmid 10023777] [evidence IDA]; Interacts with receptors to reduce the action of another ligand, the agonist [goid 48019] [pmid 11890646] [evidence TAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	IL18BPa	IL18BPa
Homo sapiens	RefSeq	NM_173044.1	ILMN_10368	IL18BP	NM_173044.1	NM_173044.1		10068	27502399	NM_173044.1	IL18BP	NP_766632.1	ILMN_1653575	0005670463	A	1374	GGAGTATGGGAGAGAGGGACTGCCACACAGAAGCTGAAGACAACACCTGC	11	+	71391287-71391336	11q13.4a	Homo sapiens interleukin 18 binding protein (IL18BP), transcript variant D, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10023777] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [pmid 10023777] [evidence IDA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with interleukin-18 [goid 42007] [pmid 10023777] [evidence IDA]; Interacts with receptors to reduce the action of another ligand, the agonist [goid 48019] [pmid 11890646] [evidence TAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	IL18BPa	IL18BPa
Homo sapiens	RefSeq	XM_943229.1	ILMN_33439	LOC648173	XM_943229.1	XM_943229.1		648173	88951502	XM_943229.1	LOC648173	XP_948322.1	ILMN_1680189	0001070020	S	3197	GGCACCATTGTTGAAAATGAATTCATTGTAGGTGTGTGGGTTTGTTTCTG					PREDICTED: Homo sapiens hypothetical protein LOC648173 (LOC648173), mRNA.					
Homo sapiens	RefSeq	XR_041381.1	ILMN_334211	FLJ38723	XR_041381.1	XR_041381.1		255180	169208200	XR_041381.1	FLJ38723		ILMN_3306959	0000670411	A	3028	ACGTGGACCGGGAGAATGAGTACATAAGCAGGCTGGCTCAGGACAAGGAG	15	-	60322763-60322812	15q22.2b	PREDICTED: Homo sapiens misc_RNA (FLJ38723), miscRNA.					
Homo sapiens	RefSeq	XM_934707.1	ILMN_31051	LOC647308	XM_934707.1	XM_934707.1		647308	89037522	XM_934707.1	LOC647308	XP_939800.1	ILMN_1676565	0001430541	S	1	ATGCAAACCCCACCTCCAGGCAAGGTGGAAGCCCATTTGGCAGCTGAGGC	14	+	104628877-104628926		PREDICTED: Homo sapiens hypothetical protein LOC647308 (LOC647308), mRNA.					
Homo sapiens	RefSeq	XM_945496.1	ILMN_31264	LOC652439	XM_945496.1	XM_945496.1		652439	88999545	XM_945496.1	LOC652439	XP_950589.1	ILMN_1704252	0004590168	S	516	CACCTACTTACTCCCTGGTCATCCTTCCTTTGGGTCAGTGAAGTTGCTGG					PREDICTED: Homo sapiens hypothetical protein LOC652439 (LOC652439), mRNA.					
Homo sapiens	RefSeq	XR_037330.1	ILMN_353167	LOC644387	XR_037330.1	XR_037330.1		644387	169170434	XR_037330.1	LOC644387		ILMN_3296783	0006590138	M	628	GTCACCAGTTAAGCAGGCTCGTTGGAAGTCCCCTTCTGACATTGAAGGTC	7	-	63534038-63534087	7q11.21c	PREDICTED: Homo sapiens misc_RNA (LOC644387), miscRNA.					
Homo sapiens	RefSeq	NR_024477.1	ILMN_370477	LOC100132707	NR_024477.1	NR_024477.1		100132707	213511959	NR_024477.1	LOC100132707		ILMN_3231439	0001510730	I	1212	AAATATTTTGCCTAAAATTAAATGAAAATATATGTATTATGTTCTTAAAA	7	+	154738513-154738562	7q36.2c	Homo sapiens hypothetical LOC100132707 (LOC100132707), transcript variant 2, non-coding RNA.					
Homo sapiens	RefSeq	NR_024477.1	ILMN_370477	LOC100132707	NR_024477.1	NR_024477.1		100132707	213511959	NR_024477.1	LOC100132707		ILMN_3204136	0004390343	A	955	CAGAACGAACTCTGCATTGTGAACATCTGAACAGGGTGGAAACAGACACT	7	+	154738110-154738159	7q36.2c	Homo sapiens hypothetical LOC100132707 (LOC100132707), transcript variant 2, non-coding RNA.					
Homo sapiens	RefSeq	NM_015075.1	ILMN_23479	IQSEC2	NM_015075.1	NM_015075.1		23096	53832025	NM_015075.1	IQSEC2	NP_055890.1	ILMN_1658513	0004120056	S	4902	CTGTCCGTCAGAATCTCCGCTGCCTCTCCAGCCCTTTTGCAGCCCTGTTT	X	-	53280844-53280893	Xp11.22a	Homo sapiens IQ motif and Sec7 domain 2 (IQSEC2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	BRAG1; KIAA0522	BRAG1; KIAA0522
Homo sapiens	RefSeq	NM_001085476.1	ILMN_309108	FOXD4L6	NM_001085476.1	NM_001085476.1		653404	146262006	NM_001085476.1	FOXD4L6	NP_001078945.1	ILMN_3244100	0001770301	S	276	CCGGACGGGTGTTTGCCCAGAAGACCATCATCCCTGGACTACGTTAGGAG	9	-	69201879-69201928	9q12i	Homo sapiens forkhead box D4-like 6 (FOXD4L6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC119257	MGC119257
Homo sapiens	RefSeq	NM_144594.1	ILMN_17221	GTSF1	NM_144594.1	NM_144594.1		121355	21389378	NM_144594.1	GTSF1	NP_653195.1	ILMN_2069632	0006290554	S	414	GGGGCACAACTCACTACTCTGACAACAACAGCCCTGCGAGCAACATAGTT	12	-	53140480-53140522:53142160-53142166	12q13.2a	Homo sapiens gametocyte specific factor 1 (GTSF1), mRNA.				FAM112B; FLJ32942	FAM112B; FLJ32942
Homo sapiens	RefSeq	XM_927887.3	ILMN_45893	LOC644790	XM_927887.3	XM_927887.3		644790	169161276	XM_927887.3	LOC644790	XP_932980.1	ILMN_3290353	0000540280	M	125	CGCCAGGTGCTTCTTAGGCCATGCTCCAAAGTCATCGTCCAGTTTCTCAC	1	-	45018858-45018907	1p34.1d	PREDICTED: Homo sapiens hypothetical LOC644790 (LOC644790), mRNA.					
Homo sapiens	Unigene	Hs.565075	ILMN_117616	HS.565075	Hs.565075		Hs.565075		6700495	AW293859			ILMN_1893075	0005910575	S	311	CTGGGGCTGCCATCGACTTGCTGTGTGACTGTTCTCTGAGCCGACTTCCT	17	+	17198869-17198918		UI-H-BW0-ain-c-07-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2729845 3, mRNA sequence					
Homo sapiens	Unigene	Hs.348844	ILMN_86958	HS.348844	Hs.348844		Hs.348844		34529437	AK123807			ILMN_1915188	0007560520	S	3102	CCCCACGCCTGTTTGTATTGGGAGCTCTGGACCAATAGTGTCTCTCCTAG	X	+	107061363-107061412		Homo sapiens cDNA FLJ41813 fis, clone NT2RI2011450					
Homo sapiens	RefSeq	XM_001716725.1	ILMN_334494	LOC100128918	XM_001716725.1	XM_001716725.1		100128918	169168693	XM_001716725.1	LOC100128918	XP_001716777.1	ILMN_3176146	0006860523	A	3836	GGGGAATGTGTTTGGGAAAGTCAAGAGTGGTAGGATTGGTTGGCTGGGCG				6p21.1f	PREDICTED: Homo sapiens hypothetical protein LOC100128918 (LOC100128918), mRNA.					
Homo sapiens	RefSeq	NM_000449.3	ILMN_23429	RFX5	NM_001025603.1	NM_001025603.1		5993	71040089	NM_001025603.1	RFX5	NP_001020774.1	ILMN_1741200	0002650370	A	3271	GCTAGTTCTGTGGTCAGGCGGCACCAATGAGAAAGGAATGCAGACCCTCC	1	-	151313406-151313455	1q21.2d	Homo sapiens regulatory factor X, 5 (influences HLA class II expression) (RFX5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9806546] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9806546] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16464847] [evidence IPI]		
Homo sapiens	RefSeq	XM_001718408.1	ILMN_348528	LOC100134522	XM_001718408.1	XM_001718408.1		100134522	169170335	XM_001718408.1	LOC100134522	XP_001718460.1	ILMN_3246430	0005080220	S	221	TTTTGCCATTTGCCCAGGCTGGACTCGCAGTCCTGGACTCAACCACCTTG	7	+	28275487-28275536		PREDICTED: Homo sapiens similar to hCG2033532 (LOC100134522), mRNA.					
Homo sapiens	RefSeq	XM_001713828.1	ILMN_346286	LOC100134329	XM_001713828.1	XM_001713828.1		100134329	169214806	XM_001713828.1	LOC100134329	XP_001713880.1	ILMN_3244669	0004920689	S	2	TTCCTGCTGGCATATATGATGACTTAGCTTTTTTCCCCGACAGATCGACT					PREDICTED: Homo sapiens hypothetical protein LOC100134329 (LOC100134329), mRNA.					
Homo sapiens	RefSeq	XM_001725871.1	ILMN_348925	LOC100130902	XM_001725871.1	XM_001725871.1		100130902	169205484	XM_001725871.1	LOC100130902	XP_001725923.1	ILMN_3269131	0006940192	M	392	GAGTCAGAATGACAAAGCAGAAATCCACTCCTCGTGCAGCCCTGGCAACC				12q23.3a	PREDICTED: Homo sapiens hypothetical protein LOC100130902 (LOC100130902), mRNA.					
Homo sapiens	RefSeq	NM_181050.1	ILMN_6274	AXIN1	NM_181050.1	NM_181050.1		8312	31083143	NM_181050.1	AXIN1	NP_851393.1	ILMN_1766185	0003460754	A	3103	CAGCTTGTCTCTTGCCTGCCACTGTGTGAATCGGCGACGGAGCACTGCAC	16	-	337723-337772	16p13.3f	Homo sapiens axin 1 (AXIN1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12072559] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12072559] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16753179] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11955436] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12000790] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12820959] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15327769] [evidence EXP]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 12072559] [evidence IDA]; A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome [goid 30877] [pmid 16188939] [evidence IDA]; A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome [goid 30877] [pmid 9601641] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment, maintenance and elaboration of an axis in the oocyte [goid 7309] [pmid 9230313] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence ISS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [pmid 9601641] [evidence IC ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9230313] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9601641] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12192039] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9601641] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12192039] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9601641] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AXIN; MGC52315	AXIN; MGC52315
Homo sapiens	RefSeq	XR_018647.2	ILMN_165343	LOC649489	XR_018647.2	XR_018647.2		649489	169164626	XR_018647.2	LOC649489		ILMN_3206931	0001570612	A	548	CCTCCAGGACTTCCTCTATGGTGGCGTTGTCGGAACAGCCCTGCAGAACT				2q12.3a	PREDICTED: Homo sapiens similar to protein phosphatase 1, regulatory subunit 2 (LOC649489), miscRNA.					
Homo sapiens	RefSeq	XR_018647.2	ILMN_165343	LOC649489	XR_018647.2	XR_018647.2		649489	169164626	XR_018647.2	LOC649489		ILMN_3283444	0002690196	M	455	GACCCTTCTCTTCACGGACCTTGAGCCCACAGCCCAAGTGCTGGGCAATG				2q12.3a	PREDICTED: Homo sapiens similar to protein phosphatase 1, regulatory subunit 2 (LOC649489), miscRNA.					
Homo sapiens	Unigene	Hs.434235	ILMN_91141	HS.434235	Hs.434235		Hs.434235		27502894	BC042493			ILMN_1867214	0001990093	S	1059	GGTCAATTCACCAGACAAAGGGCCACAGAAGCATTGCATCCTTTCATGAC	18	-	60032550-60032599		Homo sapiens hypothetical gene supported by BC042493, mRNA (cDNA clone IMAGE:4826642)					
Homo sapiens	RefSeq	NM_152483.1	ILMN_15077	FLJ25328	NM_152483.1	NM_152483.1		148231	22749008	NM_152483.1	FLJ25328	NP_689696.1	ILMN_1661004	0002120471	S	1493	TAGCTAGACATAGTGCCACCTGGATTCACTGTTGGCTCCAGAATCCCCCC	19	+	16013751-16013800	19p13.12a	Homo sapiens hypothetical protein LOC148231 (FLJ25328), mRNA.				MGC126002	MGC126002
Homo sapiens	RefSeq	XM_375550.3	ILMN_41818	SHC2	XM_375550.3	XM_375550.3		25759	89050434	XM_375550.3	SHC2	XP_375550.3	ILMN_1754942	0000110767	I	857	ACCAGACGGGCGGGTTACCACAGGGAGACCAGAGCAGCATCCGCCCTGCA	19	-	376343-376388:385709-385712	19p13.3j	PREDICTED: Homo sapiens SHC (Src homology 2 domain containing) transforming protein 2 (SHC2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7527937] [evidence TAS]		
Homo sapiens	RefSeq	NM_198564.1	ILMN_139359	FLJ44290	NM_198564.1	NM_198564.1		375347	38348403	NM_198564.1	FLJ44290	NP_940966.1	ILMN_1770065	0001400075	S	1609	TCAGGAGGCTGAGGTGAAAGGATTACTGGAGCCTGGGAGTTCGAGTCTGC	3	-	57459160-57459209	3p14.3b-p14.3a	Homo sapiens FLJ44290 protein (FLJ44290), mRNA.					
Homo sapiens	RefSeq	NM_199444.1	ILMN_16148	COPE	NM_199444.1	NM_199444.1		11316	40805826	NM_199444.1	COPE	NP_955476.1	ILMN_2339627	0001070504	A	514	AAGCTGGACCGCCTGGACCTCGCCCGGAAGGAGCTGAAGAGAATGCAGGA	19	-	19015637-19015661:19016385-19016409	19p13.11b	Homo sapiens coatomer protein complex, subunit epsilon (COPE), transcript variant 3, mRNA.	One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8599108] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8533093] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISS]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11031247] [evidence EXP]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat [goid 48205] [pmid 16956762] [evidence EXP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ13241; epsilon-COP	FLJ13241; epsilon-COP
Homo sapiens	RefSeq	NM_016389.2	ILMN_178375	IVNS1ABP	NM_016389.2	NM_016389.2		10625	54144641	NM_016389.2	IVNS1ABP	NP_057473.2	ILMN_1715133	0006760671	I	1355	GCAGCAGTCCTGCCCCAGTTCTCCTAAGAAAAATCCGCTGTGGGCAGAGA	1	-	183542256-183542305	1q25.3g	Homo sapiens influenza virus NS1A binding protein (IVNS1ABP), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 9696811] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9696811] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 9696811] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9696811] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9696811] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ36593; FLJ35593; KIAA0850; FLARA3; FLJ10069; NS1-BP; NS-1; DKFZp686K06216; ND1; HSPC068; FLJ10962; FLJ10411; NS1BP	KIAA0850; DKFZp686K06216; NS1-BP; NS-1; ND1; HSPC068
Homo sapiens	RefSeq	NM_018027.2	ILMN_28435	FRMD4A	NM_018027.3	NM_018027.3		55691	116063561	NM_018027.3	FRMD4A	NP_060497.3	ILMN_1678961	0001770008	S	6447	CCCCATCCAGGTGCTATCAGATGACCAGTTACTGCTTAGTTAACTAGGTG	10	-	13727488-13727537	10p13d-p13c	Homo sapiens FERM domain containing 4A (FRMD4A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA1294; bA295P9.4; FRMD4; FLJ10210	bA295P9.4; KIAA1294; FRMD4; FLJ10210
Homo sapiens	RefSeq	NM_030815.2	ILMN_20546	PDRG1	NM_030815.2	NM_030815.2		81572	40807483	NM_030815.2	PDRG1	NP_110442.1	ILMN_1731720	0001770519	S	1039	GGGGCAGGCACACACACCTCCCGCCAGCTCCAATTTTGCACTTTTTCCCT	20	-	30533042-30533091	20q11.21b	Homo sapiens p53 and DNA-damage regulated 1 (PDRG1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	PDRG; C20orf126	PDRG; C20orf126
Homo sapiens	RefSeq	XM_001715246.1	ILMN_343534	LOC100134007	XM_001715246.1	XM_001715246.1		100134007	169217387	XM_001715246.1	LOC100134007	XP_001715298.1	ILMN_3242522	0005290017	S	19	GTGGATCCAAAGGCACGTTTTATGACAGAAGAAGCCTTAAGACACCGTGT					PREDICTED: Homo sapiens hypothetical protein LOC100134007 (LOC100134007), mRNA.					
Homo sapiens	RefSeq	NM_003122.2	ILMN_25404	SPINK1	NM_003122.2	NM_003122.2		6690	45505131	NM_003122.2	SPINK1	NP_003113.2	ILMN_1787266	0002260326	S	151	GCCTTGGCCCTGTTGAGTCTATCTGGTAACACTGGAGCTGACTCCCTGGG	5	-	147189361-147189386:147191279-147191302	5q32e	Homo sapiens serine peptidase inhibitor, Kazal type 1 (SPINK1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14507909] [evidence IPI]	Spink3; PCTT; PSTI; TATI	Spink3; PCTT; PSTI; TATI
Homo sapiens	RefSeq	NM_001810.5	ILMN_183841	CENPB	NM_001810.5	NM_001810.5		1059	51944960	NM_001810.5	CENPB	NP_001801.1	ILMN_1664028	0000610056	S	2744	GGGCCCAGAGTCCAGCCGTCCAGCTGCTCCTTTCCCAGTTTGATTTCAAT	20	-	3764544-3764593	20p13b	Homo sapiens centromere protein B, 80kDa (CENPB), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [pmid 1893793] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 1893793] [evidence NAS]; Interacting selectively with satellite DNA, DNA containing highly repetitive sequences which makes up a large proportion of the eukaryotic genome [goid 3696] [pmid 1893793] [evidence NAS]		
Homo sapiens	RefSeq	NM_021061.1	ILMN_25690	ZNF250	NM_021061.1	NM_021061.1		58500	45387946	NM_021061.1	ZNF250	NP_066405.1	ILMN_1757230	0005910347	S	1821	CATGTGGAACCACAAGCAGCCTTCAGCCCAAGAGAAGTCTCTGTTAACTC	8	-	146077615-146077664	8q24.3h	Homo sapiens zinc finger protein 250 (ZNF250), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZFP647; MGC111123; ZNF647; MGC9718	ZFP647; MGC111123; ZNF647; MGC9718
Homo sapiens	RefSeq	NM_016547.1	ILMN_25183	SDF4	NM_016547.1	NM_016547.1		51150	7706572	NM_016547.1	SDF4	NP_057631.1	ILMN_1785605	0003120398	I	1225	TGCAGCCAATAGGCACCTTAAATAGCCACTTCGTGCGGCTGGCCGCGGAG	1	-	1142978-1143027	1p36.33b-p36.33a	Homo sapiens stromal cell derived factor 4 (SDF4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RP5-902P8.6; Cab45	RP5-902P8.6; Cab45
Homo sapiens	RefSeq	NM_016547.1	ILMN_25183	SDF4	NM_016547.1	NM_016547.1		51150	7706572	NM_016547.1	SDF4	NP_057631.1	ILMN_1696065	0001980360	A	1771	TGAGAACGAAATCTCGCTTCAGTCACTCTGCCGAAGGCGCTGACGGCATC	1	-	1142432-1142481	1p36.33b-p36.33a	Homo sapiens stromal cell derived factor 4 (SDF4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RP5-902P8.6; Cab45	RP5-902P8.6; Cab45
Homo sapiens	RefSeq	NM_004727.1	ILMN_18078	SLC24A1	NM_004727.2	NM_004727.2		9187	117606343	NM_004727.2	SLC24A1	NP_004718.1	ILMN_1747395	0004180689	S	5075	GAACAGCTTAATATCACTGGCTTCAGAGCAAAATGAGCTCGGGTGACTGC	15	+	63734958-63735007	15q22.31b	Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (SLC24A1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9478004] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9478004] [evidence TAS]; The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites [goid 19867] [pmid 9856482] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 7539424] [evidence NAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9856482] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light intensity stimulus [goid 9642] [pmid 9856482] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + K+(in) + Na+(out) = Ca2+(out) + K+(out) + Na+(in) [goid 8273] [pmid 9478004] [evidence NAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + K+(in) + Na+(out) = Ca2+(out) + K+(out) + Na+(in) [goid 8273] [evidence IEA]	NCKX; RODX; NCKX1; KIAA0702; HsT17412	HsT17412; NCKX; RODX; NCKX1; KIAA0702
Homo sapiens	RefSeq	NM_022111.2	ILMN_27568	CLSPN	NM_022111.2	NM_022111.2		63967	21735568	NM_022111.2	CLSPN	NP_071394.2	ILMN_1691165	0004890634	S	3957	GCTGAGGCGGCAAAGGAATCGTCTAAGTCTCAGGTAAAGAAAAGGGGTCC	1	-	36202190-36202207:36202515-36202546	1p34.3e	Homo sapiens claspin homolog (Xenopus laevis) (CLSPN), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11090622] [evidence NAS]	MGC131615; MGC131613; CLASPIN; MGC131612	MGC131615; MGC131613; CLASPIN; MGC131612
Homo sapiens	RefSeq	Hs.416139	ILMN_10845	KCNA1	NM_000217.2	NM_000217.2		3736	119395747	NM_000217.2	KCNA1	NP_000208.2	ILMN_1872462	0005050019	S	7271	GCTTTCTTGGGAAGTCCAGCATGTATGTAAGGGGTGAGGCCCTGCTGACC	12	+	4896971-4897020	12p13.32a	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia) (KCNA1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8845167] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8845167] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 7842011] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 8845167] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of potassium ions (K+) from one side of a membrane to the other [goid 15079] [pmid 8845167] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	HUK1; MGC126782; MBK1; RBK1; HBK1; AEMK; EA1; KV1.1; MK1; MGC138385	
Homo sapiens	RefSeq	XM_497717.2	ILMN_43133	LOC127150	XM_497717.2	XM_497717.2		127150	88943547	XM_497717.2	LOC127150	XP_497717.2	ILMN_1736400	0004730296	S	72	CAGTGTTCATGCTGTTACCCGCTGTACTCCTTGTGAGGTGAAGAAGCCCC	1	+	157483701-157483737:157512989-157513001		PREDICTED: Homo sapiens similar to serum amyloid P component precursor (LOC127150), mRNA.					
Homo sapiens	RefSeq	NM_144578.3	ILMN_24999	MAPK1IP1L	NM_144578.3	NM_144578.3		93487	93277111	NM_144578.3	MAPK1IP1L	NP_653179.1	ILMN_3248961	0003890241	S	6230	CCCACAGGAGATTTCGCTGGCATTCCTTGGAACTCCCAATTTCAGTAGGG	14	+	54606426-54606475	14q22.3a	Homo sapiens mitogen-activated protein kinase 1 interacting protein 1-like (MAPK1IP1L), mRNA.				C14orf32; MGC23138; MISS; c14_5346	MGC23138; MISS; c14_5346
Homo sapiens	RefSeq	XM_001722176.1	ILMN_345410	LOC729798	XM_001722176.1	XM_001722176.1		729798	169202744	XM_001722176.1	LOC729798	XP_001722228.1	ILMN_3302905	0004760400	M	3	CAAGATGGCGCTGAAAGCAAAGAAGGAAGCTCCTGCCCCTCCTAAAGCTG				11p11.2e	PREDICTED: Homo sapiens similar to ribosomal protein L23a (LOC729798), mRNA.					
Homo sapiens	RefSeq	XM_001722176.1	ILMN_345410	LOC729798	XM_001722176.1	XM_001722176.1		729798	169202744	XM_001722176.1	LOC729798	XP_001722228.1	ILMN_3226301	0004250068	A	381	CACCCTGATTCAGCCTGATGGAGAGAAGAAAGCATATGTTCAACTGGCTC				11p11.2e	PREDICTED: Homo sapiens similar to ribosomal protein L23a (LOC729798), mRNA.					
Homo sapiens	Unigene	Hs.520349	ILMN_99761	HS.520349	Hs.520349		Hs.520349		28277084	BC045657			ILMN_1855286	0006980500	S	3657	GTCTTTGGAGCCCAGCCTTCCCTGTGTAGTGAGCTGGAAACTCCTTTAGA	6	-	118889121-118889170		Homo sapiens cDNA clone IMAGE:5270591					
Homo sapiens	RefSeq	XM_001723968.1	ILMN_344334	LOC100129969	XM_001723968.1	XM_001723968.1		100129969	169179723	XM_001723968.1	LOC100129969	XP_001724020.1	ILMN_3187300	0001170414	A	631	CTCCTTCTACTGAGGAGGAAGGCCTGATCTTCTGTGATGCCCCCAGTGCC				9p13.3c	PREDICTED: Homo sapiens Transmembrane protein ENSP00000340100 (LOC100129969), mRNA.					
Homo sapiens	RefSeq	NM_000570.2	ILMN_8741	FCGR3B	NM_000570.3	NM_000570.3		2215	132814488	NM_000570.3	FCGR3B	NP_000561.3	ILMN_1728639	0001450139	S	1707	GAGCCCTCTAATGCTAGGAGTAGCAAATGGTCCTAGGAAGGGGACTGAGG	1	-	161593524-161593573	1q23.3b	Homo sapiens Fc fragment of IgG, low affinity IIIb, receptor (CD16b) (FCGR3B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2139735] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	CD16b; FCG3; CD16; FCGR3	CD16b; FCG3; CD16; FCGR3
Homo sapiens	Unigene	Hs.100261	ILMN_74675	HS.100261	Hs.100261		Hs.100261		34526785	AK130049			ILMN_1854469	0000270762	S	1760	CTTGGAGCTCTTTTCCCAGCTGTCTACCATGCATTTGCAACAGGAGGAAG	10	+	60260716-60260765		Homo sapiens cDNA FLJ26539 fis, clone KDN09310					
Homo sapiens	RefSeq	NM_133468.3	ILMN_364634	BMPER	NM_133468.3	NM_133468.3		168667	197304753	NM_133468.3	BMPER	NP_597725.1	ILMN_3307916	0002970364	S	2680	GGAGATTGGTGACCGGCCCTAATGGTGCATGAAAAGCGAGTGATAGGCTG	7	+	34193393-34193442	7p14.3b	Homo sapiens BMP binding endothelial regulator (BMPER), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_927087.1	ILMN_41213	LOC643805	XM_927087.1	XM_927087.1		643805	89038233	XM_927087.1	LOC643805	XP_932180.1	ILMN_1717012	0007550739	S	216	AGAGGAGAAGGAGATCAGTGGGTACTGTGTGGAATGTCCCGGCCTCCCCA	15	+	28875678-28875696:28876672-28876702		PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC643805), mRNA.					
Homo sapiens	RefSeq	XM_495873.4	ILMN_179781	LOC440040	XM_495873.4	XM_495873.4		440040	169202534	XM_495873.4	LOC440040	XP_495873.3	ILMN_3279365	0005810181	M	1316	CAGCATCCTATGGGAAGACAGAAGAAAATGCCAAGGTCGCTTCCTTCAGG	11	+	49770139-49770187:49785783-49785783	11p11.12c	PREDICTED: Homo sapiens similar to hCG2039930 (LOC440040), mRNA.					
Homo sapiens	RefSeq	XM_495873.4	ILMN_179781	LOC440040	XM_495873.4	XM_495873.4		440040	169202534	XM_495873.4	LOC440040	XP_495873.3	ILMN_3202883	0006330609	A	1998	CAGAAATGTGTTTATCTGCTGTGGGAACCCCTTTATCCCATAAAGCCCTC	11	+	49788382-49788431	11p11.12c	PREDICTED: Homo sapiens similar to hCG2039930 (LOC440040), mRNA.					
Homo sapiens	RefSeq	NM_003867.2	ILMN_9431	FGF17	NM_003867.2	NM_003867.2		8822	61743927	NM_003867.2	FGF17	NP_003858.1	ILMN_1781390	0005560725	S	993	GGAGGTGGCTGTCCTCAAAATCTGCTTCTCGGATCTCCCTCAGTCTGCCC	8	+	21906090-21906139	8p21.3b	Homo sapiens fibroblast growth factor 17 (FGF17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12975309] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1697263] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9139660] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9514906] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9514906] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9514906] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9514906] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 9514906] [evidence TAS]	FGF-13	FGF-13
Homo sapiens	RefSeq	XM_001719071.1	ILMN_335976	LOC727908	XM_001719071.1	XM_001719071.1		727908	169217783	XM_001719071.1	LOC727908	XP_001719123.1	ILMN_3200362	0007650195	A	26	CCTATGGAAGTTCCTTTTATGCATTGGAGGAAAAACATGTTGGCTTTTCT					PREDICTED: Homo sapiens hypothetical LOC727908 (LOC727908), partial mRNA.					
Homo sapiens	RefSeq	NM_001004309.1	ILMN_27386	ZNF774	NM_001004309.1	NM_001004309.1		342132	51972199	NM_001004309.1	ZNF774	NP_001004309.1	ILMN_1760339	0001450044	S	1617	TGCTACTGTCTTCAAGCACCCCAAATAGAGAAAACCTGGGCGTCAGTGGC	15	+	88705563-88705612	15q26.1b	Homo sapiens zinc finger protein 774 (ZNF774), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC75360	MGC75360
Homo sapiens	RefSeq	NM_003223.1	ILMN_17612	TFAP4	NM_003223.1	NM_003223.1		7023	4507446	NM_003223.1	TFAP4	NP_003214.1	ILMN_1814657	0003520504	S	1865	GCCCCCACCTCTGCCTCCAGGTCTCATCTTCCACCCCAAAAATGTCTGTC	16	-	4247413-4247462	16p13.3b	Homo sapiens transcription factor AP-4 (activating enhancer binding protein 4) (TFAP4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 2833704] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 2123466] [evidence TAS]	Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 2833704] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2123466] [evidence TAS]	AP-4	AP-4
Homo sapiens	RefSeq	NR_027345.1	ILMN_387355	NCRNA00173	NR_027345.1	NR_027345.1		100287569	224994216	NR_027345.1	NCRNA00173		ILMN_3311165	0003870528	I	309	GGGGAGGGGGGGAGGGTCATATAACGAAGGCCAGAAAGAACAAATTAGAT					Homo sapiens non-protein coding RNA 173 (NCRNA00173), transcript variant 1, non-coding RNA.					
Homo sapiens	RefSeq	NM_017548.3	ILMN_11989	CDV3	NM_017548.3	NM_017548.3		55573	52856418	NM_017548.3	CDV3	NP_060018.1	ILMN_1673788	0005720746	A	2699	GGGAGCGTTTTCAGATAGGAGTTTAGTCTTGACGAAAGTGTCCGTGCAGG	3	+	134791187-134791236	3q22.1d	Homo sapiens CDV3 homolog (mouse) (CDV3), mRNA. XM_945284 XM_945286 XM_945287	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10497265] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10497265] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10497265] [evidence ND ]	H41	H41
Homo sapiens	RefSeq	XM_945271.1	ILMN_11989	CDV3	NM_017548.3	NM_017548.3		55573	52856418	NM_017548.3	CDV3	NP_060018.1	ILMN_1810977	0003130356	A	2634	GCATGAGTTGCAGACTTGCTACTGGCAAGAGTGAAGCAAGTGGGTGAGTA	3	+	134791122-134791171	3q22.1d	Homo sapiens CDV3 homolog (mouse) (CDV3), mRNA. XM_945284 XM_945286 XM_945287	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10497265] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10497265] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10497265] [evidence ND ]	H41	
Homo sapiens	RefSeq	NM_001001795.1	ILMN_23947	MGC70857	NM_001001795.1	NM_001001795.1		414919	49169840	NM_001001795.1	MGC70857	NP_001001795.1	ILMN_1693862	0007200647	S	1654	GGCCTTTCTACACCGATCTGCATCTAGTGGGGGGTCAGCGTGAGCAGCAG	8	-	145751831-145751880	8q24.3h	Homo sapiens similar to RIKEN cDNA C030006K11 gene (MGC70857), mRNA.					
Homo sapiens	RefSeq	NM_024620.3	ILMN_15728	ZNF329	NM_024620.3	NM_024620.3		79673	71037406	NM_024620.3	ZNF329	NP_078896.3	ILMN_1689059	0007160148	S	3186	CCCCACCACTACCTCCATGGTTGTTCATTTAGGATGCTTCTAATTCAGCC	19	-	63329684-63329733	19q13.43c	Homo sapiens zinc finger protein 329 (ZNF329), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12586	FLJ12586
Homo sapiens	RefSeq	NM_052904.1	ILMN_5846	KLHL32	NM_052904.2	NM_052904.2		114792	141802306	NM_052904.2	KLHL32	NP_443136.1	ILMN_1751279	0003440392	S	2808	CTCTGACCTTGGGTCAGAACCTAACTTTACAGTGCTTCAGTTTTCCCACC				6q16.1f	Homo sapiens kelch-like 32 (Drosophila) (KLHL32), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	dJ21F7.1; MGC87753; KIAA1900; UG0030H05; BKLHD5; MGC51280; RP1-39B17.1	dJ21F7.1; MGC87753; KIAA1900; UG0030H05; BKLHD5; MGC51280; RP1-39B17.1
Homo sapiens	RefSeq	NM_214462.1	ILMN_26440	DACT2	NM_214462.2	NM_214462.2		168002	141801653	NM_214462.2	DACT2	NP_999627.1	ILMN_1691790	0005420687	S	2691	CCCGGCATGCACCTTGTTTCCATGTTGTCATCCTCCCATGGCTTCCCCTG				6q27d	Homo sapiens dapper, antagonist of beta-catenin, homolog 2 (Xenopus laevis) (DACT2), mRNA.				DAPPER2; FLJ31232; RP11-503C24.7; MGC133141; C6orf116; bA503C24.7; MGC133142	DAPPER2; RP11-503C24.7; FLJ31232; C6orf116; bA503C24.7; MGC133142
Homo sapiens	RefSeq	NM_138453.2	ILMN_5165	RAB3C	NM_138453.2	NM_138453.2		115827	34147545	NM_138453.2	RAB3C	NP_612462.1	ILMN_1685750	0004570474	S	694	GGAGACTGATCCTGCCATCACTGCTGCAAAGCAGAACACGAGACTCAAGG	5	+	57949450-57949454:58021829-58021873	5q11.2h	Homo sapiens RAB3C, member RAS oncogene family (RAB3C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the frequency, rate or extent of exocytosis [goid 17157] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	XM_379665.2	ILMN_45348	C9ORF109	XM_379665.2	XM_379665.2		286333	89029972	XM_379665.2	C9orf109	XP_379665.2	ILMN_1695485	0007560706	S	5235	GCGGTCTGGAAAACGAGCTAATTCCGTGCCGATGGAGGTGTTGATGGATG	9	+	114921410-114921459	9q32b	PREDICTED: Homo sapiens chromosome 9 open reading frame 109 (C9orf109), mRNA.					
Homo sapiens	Unigene	Hs.98754	ILMN_74552	HS.98754	Hs.98754		Hs.98754		27879172	BX113125			ILMN_1821522	0003850152	S	268	GAGTTCTGTAAGATGGGAGGATGAATTGGACCTTCCTCCTAGGGTGAGGC	5	+	7398592-7398641		BX113125 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998A081928, mRNA sequence					
Homo sapiens	RefSeq	NM_004986.2	ILMN_183293	KTN1	NM_004986.2	NM_004986.2		3895	118498367	NM_004986.2	KTN1	NP_004977.2	ILMN_2339202	0004730148	A	4021	GCTTCAGGCGGTAAACCAACAGCTCACAAAGGAGAAAGAGCACTACCAGG	14	+	55216101-55216150	14q22.3b	Homo sapiens kinectin 1 (kinesin receptor) (KTN1), transcript variant 4, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7787243] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 7787243] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7787243] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [pmid 7787243] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	KIAA0004; MGC133337; MU-RMS-40.19; CG1; KNT	KIAA0004; MGC133337; MU-RMS-40.19; CG1; KNT
Homo sapiens	RefSeq	NR_029864.1	ILMN_388182	MIR371	NR_029864.1	NR_029864.1		442916	262206212	NR_029864.1	MIR371		ILMN_3308956	0005870598	S	16	GGGGGCACTTTCTGCTCTCTGGTGAAAGTGCCGCCATCTTTTGAGTGTTA				19q13.41b	Homo sapiens microRNA 371 (MIR371), microRNA.					
Homo sapiens	RefSeq	NM_006816.1	ILMN_9504	LMAN2	NM_006816.1	NM_006816.1		10960	5803022	NM_006816.1	LMAN2	NP_006807.1	ILMN_1776963	0003850092	S	1289	TCCTGGGGCTGGTGTCTCAGGAGCAGGGGTCTGTGTCTACAGATGGGCTG	5	-	176691425-176691474	5q35.3a	Homo sapiens lectin, mannose-binding 2 (LMAN2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the ER-Golgi intermediate compartment system [goid 33116] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	GP36B; C5orf8; VIP36	GP36B; C5orf8; VIP36
Homo sapiens	RefSeq	NM_199324.1	ILMN_25194	OTUD4	NM_199324.1	NM_199324.1		54726	40807495	NM_199324.1	OTUD4	NP_955356.1	ILMN_1708203	0003990201	I	5855	TCCTCTCAAATCTTCAACTCTTGCCCCATGTCTCCTTGGCAGCAGGATGC	4	-	146275310-146275359	4q31.22a	Homo sapiens OTU domain containing 4 (OTUD4), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	KIAA1046; DKFZp434I0721; HIN1; HSHIN1	HSHIN1; KIAA1046; DKFZp434I0721; HIN1
Homo sapiens	RefSeq	XM_001716060.1	ILMN_353249	LOC100134506	XM_001716060.1	XM_001716060.1		100134506	169170435	XM_001716060.1	LOC100134506	XP_001716112.1	ILMN_3249704	0003890403	S	183	ACCCAAACCACATTTCACCAGACTGTATCCTCACCCCCATCTGACCTTAC	7	-	63666501-63666507:63666508-63666550		PREDICTED: Homo sapiens similar to hCG1817771 (LOC100134506), mRNA.					
Homo sapiens	Unigene	Hs.572558	ILMN_124739	HS.572558	Hs.572558		Hs.572558		83152958	DB305200			ILMN_1878603	0003120291	S	380	TACAGCCAGGGAAGAATGGGATCAAAGGAAGGAGGCTGCTGGAGGGCTGG	19	-	36605156-36605205		DB305200 BRAWH3 Homo sapiens cDNA clone BRAWH3019198 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002126.3	ILMN_171378	HLF	NM_002126.4	NM_002126.4		3131	94983916	NM_002126.4	HLF	NP_002117.1	ILMN_1722829	0000540706	S	3787	TATGAGACACAGGTGGACGTAGAGTTGGCCTTTTTACAGGCAAAGAGGCG	17	+	50755613-50755662	17q22b	Homo sapiens hepatic leukemia factor (HLF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1386162] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8639829] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1386162] [evidence TAS]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	Interacting selectively with double-stranded DNA [goid 3690] [pmid 1386162] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC33822	
Homo sapiens	RefSeq	XR_038888.1	ILMN_339043	LOC100132430	XR_038888.1	XR_038888.1		100132430	169206908	XR_038888.1	LOC100132430		ILMN_3280605	0001070543	M	300	CTACATCAATTATAAACCTCTTATATCCTTAAAGAAAATTTTAAGTGAAA	14	-	49433173-49433222	14q22.1b	PREDICTED: Homo sapiens misc_RNA (LOC100132430), miscRNA.					
Homo sapiens	RefSeq	NM_033188.2	ILMN_1062	KRTAP4-5	NM_033188.3	NM_033188.3		85289	118572607	NM_033188.3	KRTAP4-5	NP_149445.3	ILMN_1659475	0004890129	S	668	ACACTTCCCTGCCAGTTTGTCTCATGTGGCATTCAGAGTGGACATTCAGC	17	-	39305337-39305386	17q21.2a	Homo sapiens keratin associated protein 4-5 (KRTAP4-5), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	KRTAP4.5; KAP4.5	KRTAP4.5; KAP4.5
Homo sapiens	RefSeq	NM_022405.2	ILMN_17068	SLC6A20	NM_022405.2	NM_022405.2		54716	46249402	NM_022405.2	SLC6A20	NP_071800.1	ILMN_2324109	0003170484	A	4428	GGCCACCTGGGATCAGTCATCAGTCAGGGTGCGTAAGCCTTGAATACCAG	3	-	45772715-45772764	3p21.31j	Homo sapiens solute carrier family 6 (proline IMINO transporter), member 20 (SLC6A20), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISS]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [pmid 15632147] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [pmid 15632147] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	MGC161475; XT3; Xtrp3; SIT1	MGC161475; Xtrp3; XT3; SIT1
Homo sapiens	RefSeq	XM_943707.1	ILMN_34578	LOC649431	XM_943707.1	XM_943707.1		649431	88981251	XM_943707.1	LOC649431	XP_948800.1	ILMN_1764867	0006620053	S	363	TGAATGTTGCCGTGCTCCAATTGGCCCATAGGCCGAAGTTTTTGGACTCC					PREDICTED: Homo sapiens hypothetical protein LOC649431 (LOC649431), mRNA.					
Homo sapiens	Unigene	Hs.541982	ILMN_106041	HS.541982	Hs.541982		Hs.541982		6504058	AW204586			ILMN_1873090	0000510037	S	425	CAAGGGAGGGAATAGAGATTTCCACAGATGGCTCCTTTCCAGTACAAATG	2	-	66333895-66333944		UI-H-BI1-aec-h-12-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2718982 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001008391.1	ILMN_1901	CCDC73	NM_001008391.2	NM_001008391.2		493860	83715967	NM_001008391.2	CCDC73	NP_001008392.2	ILMN_1730745	0005810280	S	2621	TGAAGGACAGCTGGAGGAATCACATTCATTTCACATAGAGCCATCTGGAG	11	-	32635926-32635975	11p13e	Homo sapiens coiled-coil domain containing 73 (CCDC73), mRNA.				NY-SAR-79	
Homo sapiens	RefSeq	NM_005608.2	ILMN_8267	PTPRCAP	NM_005608.2	NM_005608.2		5790	65507613	NM_005608.2	PTPRCAP	NP_005599.1	ILMN_1672417	0001430341	S	783	CCATGCCTCAGACTGTCACCCCCTACCAGTTCCCAAGTCCATGTGTACCC	11	-	67203055-67203104	11q13.1f	Homo sapiens protein tyrosine phosphatase, receptor type, C-associated protein (PTPRCAP), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11390434] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 7961877] [evidence TAS]		MGC138602; LPAP; MGC138603; CD45-AP	MGC138603; MGC138602; LPAP; CD45-AP
Homo sapiens	RefSeq	NM_006639.2	ILMN_6966	CYSLTR1	NM_006639.2	NM_006639.2		10800	29029598	NM_006639.2	CYSLTR1	NP_006630.1	ILMN_1733276	0002070402	S	1333	GCATTCTTTGTCCAGCGTGACTTATGTACCCAGAAAGAAGGCCTCTTTGC	X	-	77528261-77528310	Xq21.1a	Homo sapiens cysteinyl leukotriene receptor 1 (CYSLTR1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10391245] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10391245] [evidence TAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 10391245] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10391245] [evidence TAS]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 10391245] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a leukotriene to initiate a change in cell activity. Leukotrienes are pharmacologically active substances with a set of three conjugated double bonds; some contain a peptide moiety based on cysteine [goid 4974] [pmid 10391245] [evidence TAS]	CYSLTR; MGC46139; HMTMF81; CYSLT1R; CYSLT1; HG55	CYSLTR; MGC46139; HMTMF81; CYSLT1R; CYSLT1; HG55
Homo sapiens	RefSeq	NM_199073.1	ILMN_22041	NDUFAF3	NM_199073.1	NM_199073.1		25915	41327784	NM_199073.1	NDUFAF3	NP_951047.1	ILMN_2275560	0001300025	I	157	TTGGATCAAGACGGGGGACGGGGGACTCCCAGGACGCGAGCAGAGTGAAC	3	+	49033778-49033827	3p21.31d	Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3 (NDUFAF3), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.				E3-3; 2P1; MGC10527; DKFZP564J0123	E3-3; MGC10527; 2P1; DKFZP564J0123
Homo sapiens	RefSeq	XR_000206.4	ILMN_139045	CICE	XR_000206.4	XR_000206.4		152302	88961411	XR_000206.4	CICE		ILMN_1790471	0000240437	A	15	CGTGTCCATCCTGCTGGAGAGCGACAAGAAGCTCACCCAGGAACAAGGGA	3	-	10040427-10040431:10042736-10042780	3p25.3c	PREDICTED: Homo sapiens cell death-inducing CIDE-like effector pseudogene (CICE), misc RNA.					
Homo sapiens	RefSeq	NR_030298.1	ILMN_388019	MIR572	NR_030298.1	NR_030298.1		693157	262205833	NR_030298.1	MIR572		ILMN_3310466	0003190309	S	17	GAAGTGGTCGGGGCCGCTGCGGGCGGAAGGGCGCCTGTGCTTCGTCCGCT				4p15.33e	Homo sapiens microRNA 572 (MIR572), microRNA.					
Homo sapiens	RefSeq	NM_144606.4	ILMN_27063	FLCN	NM_144606.4	NM_144606.4		201163	51317378	NM_144606.4	FLCN	NP_653207.1	ILMN_1814952	0005890113	A	1300	CGGCTGACCGAGAAGCTCCTGGAAGGTGCTCCGACCGAGGATACCTTGGT	17	-	17065595-17065644	17p11.2h	Homo sapiens folliculin (FLCN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18403135] [evidence IPI]	FLCL; BHD; MGC23445; MGC17998	FLCL; BHD; MGC23445; MGC17998
Homo sapiens	RefSeq	NM_144606.4	ILMN_27063	FLCN	NM_144606.4	NM_144606.4		201163	51317378	NM_144606.4	FLCN	NP_653207.1	ILMN_1655525	0006980148	I	1407	ATGGCCGTGGGGCGGTACCAGCTGTCTGCTCTCCTGGCAGGAATCGCTGA	17	-	17065488-17065537	17p11.2h	Homo sapiens folliculin (FLCN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18403135] [evidence IPI]	FLCL; BHD; MGC23445; MGC17998	FLCL; BHD; MGC23445; MGC17998
Homo sapiens	RefSeq	XM_932494.1	ILMN_27063	FLCN	NM_144606.4	NM_144606.4		201163	51317378	NM_144606.4	FLCN	NP_653207.1	ILMN_1683390	0003710564	S	261	TTGGGGAGCAGAAAACGCCAGGTCTTCAAGGGTGTCTGCCACCACCATGC	17	-	17076901-17076940:17080951-17080960	17p11.2h	Homo sapiens folliculin (FLCN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18403135] [evidence IPI]	FLCL; BHD; MGC23445; MGC17998	
Homo sapiens	RefSeq	NR_024476.1	ILMN_369829	LOC100132707	NR_024476.1	NR_024476.1		100132707	213511921	NR_024476.1	LOC100132707		ILMN_3230337	0006580500	I	1537	GCTGACTGCTGGGCAGGAGCAACCACATCATGACAGAAATGCAGGGATCT	7	+	154741023-154741072	7q36.2c	Homo sapiens hypothetical LOC100132707 (LOC100132707), transcript variant 1, non-coding RNA.					
Homo sapiens	RefSeq	NR_002570.2	ILMN_3983	CYP2D7P1	NR_002570.2	NR_002570.2		1564	95102479	NR_002570.2	CYP2D7P1		ILMN_2226519	0007000309	S	1203	GCGCTTTGGGGACATCATCCCCCTGAGTGTGACCCATATGACATCCCATG	22	-	42537193-42537242	22q13.2b	Homo sapiens cytochrome P450, family 2, subfamily D, polypeptide 7 pseudogene 1 (CYP2D7P1), non-coding RNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P450C2D; P450DB1; CYP2D; CYP2D@	P450C2D; P450DB1; CYP2D; CYP2D@
Homo sapiens	RefSeq	NM_003856.2	ILMN_30234	IL1RL1	NM_003856.2	NM_003856.2		9173	27894327	NM_003856.2	IL1RL1	NP_003847.2	ILMN_2242900	0005420754	I	2373	CTGCTCAACACGACTGCAAGCTCCATGAGGGCAGGGACATCATCTCTTCC	2	+	102327480-102327529	2q12.1a	Homo sapiens interleukin 1 receptor-like 1 (IL1RL1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1482686] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA];  [goid 5057] [pmid 1482686] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286016] [evidence IPI]	FIT-1; DER4; T1; MGC32623; ST2L; ST2; ST2V	FIT-1; DER4; T1; MGC32623; ST2L; ST2; ST2V
Homo sapiens	RefSeq	NM_003856.2	ILMN_30234	IL1RL1	NM_003856.2	NM_003856.2		9173	27894327	NM_003856.2	IL1RL1	NP_003847.2	ILMN_2313672	0006020300	A	1127	GCAGTACGACTGTCTGGCCCTGAATTTGCATGGCTTGAGAAGGCACACCG	2	+	102326234-102326283	2q12.1a	Homo sapiens interleukin 1 receptor-like 1 (IL1RL1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1482686] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA];  [goid 5057] [pmid 1482686] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286016] [evidence IPI]	FIT-1; DER4; T1; MGC32623; ST2L; ST2; ST2V	FIT-1; DER4; T1; MGC32623; ST2L; ST2; ST2V
Homo sapiens	RefSeq	XM_928422.1	ILMN_38829	LOC643082	XM_928422.1	XM_928422.1		643082	89041800	XM_928422.1	LOC643082	XP_933515.1	ILMN_1789543	0005390392	S	1	GCGGAGCTGGAACGGGCCAAGAGCGCCTTGCTGGAGGAGCAGAAGTCTGT	17	-	71422579-71422608:71422693-71422712		PREDICTED: Homo sapiens hypothetical protein LOC643082 (LOC643082), mRNA.					
Homo sapiens	RefSeq	XM_001133338.1	ILMN_182670	LOC729479	XM_001133338.1	XM_001133338.1		729479	113424092	XM_001133338.1	LOC729479	XP_001133338.1	ILMN_3243307	0007160280	S	210	GGAATGCCCACAGCACCAGAAGCTGAAAGAGGCAAGAAATGGATTCTCCC	13	+	79498446-79498495	13q31.1a	PREDICTED: Homo sapiens hypothetical LOC729479 (LOC729479), mRNA.					
Homo sapiens	RefSeq	NM_152417.1	ILMN_13205	TMEM68	NM_152417.1	NM_152417.1		137695	22748882	NM_152417.1	TMEM68	NP_689630.1	ILMN_1702244	0006060368	S	2069	CCACCATGCCCAGCCTGAATGATGAATTTATGTGAACACAAAGCCCTCTG	8	-	56814072-56814121	8q12.1a	Homo sapiens transmembrane protein 68 (TMEM68), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]	MGC87778; FLJ32370	MGC87778; FLJ32370
Homo sapiens	RefSeq	NM_004849.1	ILMN_28892	ATG5	NM_004849.1	NM_004849.1		9474	4757797	NM_004849.1	ATG5	NP_004840.1	ILMN_1718265	0002030228	S	3082	CTAATCCCAGGTAAGTCAAGCCTACAATGCCCTAGAGGAAGAGTAAAACC	6	-	106739130-106739179	6q21c	Homo sapiens ATG5 autophagy related 5 homolog (S. cerevisiae) (ATG5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 15292400] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [evidence ISS]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9852036] [evidence IPI]	ASP; APG5; hAPG5; APG5L	ASP; APG5; hAPG5; APG5L
Homo sapiens	RefSeq	NM_001044387.1	ILMN_180266	ZNF557	NM_001044387.1	NM_001044387.1		79230	113205080	NM_001044387.1	ZNF557	NP_001037852.1	ILMN_2346137	0005360707	A	5347	GAGGTGGGGAGTTCGAGACCAGCCTGATCAACATGGAGAAAACCTGTCTC	19	+	7038336-7038385	19p13.2e	Homo sapiens zinc finger protein 557 (ZNF557), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC4054	MGC4054
Homo sapiens	RefSeq	XM_001717608.1	ILMN_335851	LOC100130644	XM_001717608.1	XM_001717608.1		100130644	169167067	XM_001717608.1	LOC100130644	XP_001717660.1	ILMN_3177564	0000840615	A	976	CGCAGTTGTCACCTCCACAGCTTCATGCGTCGAGGTGGGCTAGAGGTAGC					PREDICTED: Homo sapiens similar to hCG2036814 (LOC100130644), mRNA.					
Homo sapiens	RefSeq	XM_001717608.1	ILMN_335851	LOC100130644	XM_001717608.1	XM_001717608.1		100130644	169167067	XM_001717608.1	LOC100130644	XP_001717660.1	ILMN_3254022	0001400368	M	1161	GAGAGCAGATGTGCCTTTCTGTGGGCAGGAAGTAACTGACCCAGTCCAGA					PREDICTED: Homo sapiens similar to hCG2036814 (LOC100130644), mRNA.					
Homo sapiens	RefSeq	NM_207484.1	ILMN_5392	FLJ40712	NM_207484.1	NM_207484.1		401044	46409593	NM_207484.1	FLJ40712	NP_997367.1	ILMN_1809892	0004200521	S	1754	GCTCCCGCAGCTCTGGCCACCCCAGGCTTATGACACACGGTAATGGATAT	2	+	242579234-242579283	2q37.3g	Homo sapiens FLJ40712 protein (FLJ40712), mRNA.					
Homo sapiens	Unigene	Hs.539683	ILMN_104673	HS.539683	Hs.539683		Hs.539683		6657432	AW270402			ILMN_1847133	0003120154	S	246	GAGCAAAGTTGATAGGCAGTAAGGAAATAAAGTGGACATAAACACAGCAG	13	-	57060325-57060374		xp75b08.x1 NCI_CGAP_Ov40 Homo sapiens cDNA clone IMAGE:2746167 3, mRNA sequence					
Homo sapiens	RefSeq	NM_012176.2	ILMN_164722	FBXO4	NM_033484.1	NM_033484.1		26272	15834620	NM_033484.1	FBXO4	NP_277019.1	ILMN_1755811	0004230070	A	837	CGACACAATGAAGGTGATGATCAACAAGGAAGCCGGTACAGTGTGATTCC	5	+	41970050-41970099	5p13.1a	Homo sapiens F-box protein 4 (FBXO4), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 16275645] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [pmid 16275645] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 16275645] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [pmid 16275645] [evidence IDA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16275645] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16275645] [evidence IPI]	FLJ10141; DKFZp547N213; FBX4	DKFZp547N213; FBX4; FLJ10141
Homo sapiens	RefSeq	NM_033484.1	ILMN_164722	FBXO4	NM_033484.1	NM_033484.1		26272	15834620	NM_033484.1	FBXO4	NP_277019.1	ILMN_1757355	0000770612	I	1194	TGGGTTGTGTGAATCAGATTTGGGCATCTGTTTTTTCCAAGCACCCAGGG	5	+	41970407-41970456	5p13.1a	Homo sapiens F-box protein 4 (FBXO4), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 16275645] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [pmid 16275645] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 16275645] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [pmid 16275645] [evidence IDA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16275645] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16275645] [evidence IPI]	FLJ10141; DKFZp547N213; FBX4	DKFZp547N213; FBX4; FLJ10141
Homo sapiens	RefSeq	XM_001718569.1	ILMN_349020	LOC100129081	XM_001718569.1	XM_001718569.1		100129081	169214490	XM_001718569.1	LOC100129081	XP_001718621.1	ILMN_3192780	0001090095	A	217	AAATACTGTAGAATCCACTTATATGAGGTACAAATATATATCAAATTCAT				19q13.43b	PREDICTED: Homo sapiens hypothetical protein LOC100129081 (LOC100129081), mRNA.					
Homo sapiens	RefSeq	XM_001718569.1	ILMN_349020	LOC100129081	XM_001718569.1	XM_001718569.1		100129081	169214490	XM_001718569.1	LOC100129081	XP_001718621.1	ILMN_3269245	0001190747	M	805	AGGCCTTTCTCCCGTGTGGACTCTCTGTTCACTGCATTTATAAGGCCTTT				19q13.43b	PREDICTED: Homo sapiens hypothetical protein LOC100129081 (LOC100129081), mRNA.					
Homo sapiens	RefSeq	XM_001713647.1	ILMN_336944	LOC100130312	XM_001713647.1	XM_001713647.1		100130312	169211923	XM_001713647.1	LOC100130312	XP_001713699.1	ILMN_3237372	0005720400	S	93	TGGGAACCTGCTCCTGGAGTCATCCCTCTGCAAACAGAGAGCCCAGAGTG					PREDICTED: Homo sapiens hypothetical protein LOC100130312 (LOC100130312), mRNA.					
Homo sapiens	RefSeq	XM_932079.1	ILMN_41595	LOC644254	XM_932079.1	XM_932079.1		644254	89041999	XM_932079.1	LOC644254	XP_937172.1	ILMN_1747924	0006760747	S	232	CCACGGGTTTGAGGCTATGGCTAAGTGGTGAGCCTTGGGGAGATGCAGGA	17	+	38038-38079:38080-38087		PREDICTED: Homo sapiens hypothetical protein LOC644254 (LOC644254), mRNA.					
Homo sapiens	Unigene	Hs.528168	ILMN_101012	HS.528168	Hs.528168		Hs.528168		20363900	BQ188349			ILMN_1909615	0005870400	S	331	AGTCCAGAAGATGACGGGGCCATGTGCTATGGAAGAAAGAGCACTCGGTC	19	+	33703671-33703720		UI-E-EJ1-ajw-i-09-0-UI.r1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajw-i-09-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_020672.1	ILMN_17182	S100A14	NM_020672.1	NM_020672.1		57402	10190711	NM_020672.1	S100A14	NP_065723.1	ILMN_1783287	0001240093	S	674	GCCAAAGAATTGGTAGTAGGGGGAGAACAGAGAGGAGCTGGGCTATGGGA	1	-	153587050-153587099	1q21.3d	Homo sapiens S100 calcium binding protein A14 (S100A14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	S100A15; BCMP84	S100A15; BCMP84
Homo sapiens	RefSeq	XR_018080.2	ILMN_167952	LOC642073	XR_018080.2	XR_018080.2		642073	169169229	XR_018080.2	LOC642073		ILMN_3243714	0003060520	S	219	TGACGAGCCCTCTCACAGAGCACGGTCTGAATCTGCACAGAGCAAGATGC	6	-	32599687-32599720:32600507-32600522		PREDICTED: Homo sapiens similar to MHC class II antigen (LOC642073), mRNA.					
Homo sapiens	RefSeq	NM_001003397.1	ILMN_15376	TPD52L1	NM_001003397.1	NM_001003397.1		7164	51173747	NM_001003397.1	TPD52L1	NP_001003397.1	ILMN_2337923	0007150349	A	536	CAGGGCAAAAGGCAACTGCAGCTTTCAGCAACGTTGGAACGGCCATCAGC	6	+	125541283-125541332	6q22.31e	Homo sapiens tumor protein D52-like 1 (TPD52L1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12963375] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16112108] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 12963375] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 16112108] [evidence IDA]	Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 16112108] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9484778] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9484778] [evidence IDA]	D53; MGC8556; hD53; TPD52L2	D53; MGC8556; hD53; TPD52L2
Homo sapiens	RefSeq	XM_001732818.1	ILMN_335769	LOC100131015	XM_001732818.1	XM_001732818.1		100131015	169164853	XM_001732818.1	LOC100131015	XP_001732870.1	ILMN_3200060	0002370750	A	1377	GCTGGGACTACAAGTCTCACTATATTGCCCGGGTTGGTCTTGAACCCCTG				2q36.3e	PREDICTED: Homo sapiens hypothetical LOC100131015 (LOC100131015), mRNA.					
Homo sapiens	RefSeq	XR_039576.1	ILMN_335227	LOC100132640	XR_039576.1	XR_039576.1		100132640	169213460	XR_039576.1	LOC100132640		ILMN_3235896	0002680554	S	3443	TGAGACAAGGGGCTCACACCTCTCTCAGCGTGGGAGGGGCCGGTGTGAGG	19	+	150156-150205	19p13.3j	PREDICTED: Homo sapiens misc_RNA (LOC100132640), miscRNA.					
Homo sapiens	RefSeq	NM_000631.3	ILMN_3665	NCF4	NM_000631.3	NM_000631.3		4689	47519797	NM_000631.3	NCF4	NP_000622.2	ILMN_2335704	0006480692	A	849	TCAAAGACTTCCCTGAGGAGGACGACCCCACCAACTGGCTGCGTTGCTAC	22	+	35601693-35601742	22q12.3d	Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8280052] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8280052] [evidence IDA]; A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2 [goid 43020] [pmid 8280052] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8280052] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 8839867] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [pmid 8280052] [evidence TAS]	SH3PXD4; P40PHOX; NCF; MGC3810	SH3PXD4; P40PHOX; MGC3810; NCF
Homo sapiens	RefSeq	NM_013416.2	ILMN_3665	NCF4	NM_000631.3	NM_000631.3		4689	47519797	NM_000631.3	NCF4	NP_000622.2	ILMN_1785005	0001940041	A	1197	GTGTCCCTGGAGCAGTGAGGGGACACCAGCAAAAACCTTCAGCTCTCAGA	22	+	35603819-35603868	22q12.3d	Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8280052] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8280052] [evidence IDA]; A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2 [goid 43020] [pmid 8280052] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8280052] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 8839867] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [pmid 8280052] [evidence TAS]	SH3PXD4; P40PHOX; NCF; MGC3810	SH3PXD4; P40PHOX; MGC3810; NCF
Homo sapiens	RefSeq	NM_172215.1	ILMN_12935	CAMKK2	NM_153500.1	NM_153500.1		10645	27437018	NM_153500.1	CAMKK2	NP_705720.1	ILMN_1743021	0006550382	A	2168	ATGATACGTAAACGCTCCTTTGGGAACCCATTCGAGGGCAGCCGGCGGGA	12	-	121682978-121683027	12q24.31b	Homo sapiens calcium/calmodulin-dependent protein kinase kinase 2, beta (CAMKK2), transcript variant 4, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11395482] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 11395482] [evidence TAS]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 11395482] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [pmid 11395482] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 11395482] [evidence TAS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 11395482] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [pmid 11395482] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 11395482] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 11395482] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC15254; CAMKK; CAMKKB; KIAA0787	MGC15254; CAMKK; CAMKKB; KIAA0787
Homo sapiens	RefSeq	NM_002535.2	ILMN_7054	OAS2	NM_002535.2	NM_002535.2		4939	74229016	NM_002535.2	OAS2	NP_002526.2	ILMN_1736729	0000240722	I	3195	CCAAAAAATTGTCTCTGGCAATAGTTACCTTCCCAGATACAGGTCCCCCC	12	+	111932434-111932483	12q24.13b	Homo sapiens 2'-5'-oligoadenylate synthetase 2, 69/71kDa (OAS2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 2440675] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 2440675] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 2440675] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 6401] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. Requires binding of double-stranded RNA [goid 1730] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	MGC78578	MGC78578
Homo sapiens	RefSeq	NM_014068.1	ILMN_11981	PSORS1C1	NM_014068.1	NM_014068.1		170679	7662660	NM_014068.1	PSORS1C1	NP_054787.1	ILMN_1799669	0002450270	S	601	CAGGCTCCAGCAACCTCAGCCCCTTCCTCCTCCCTCAGGAATCCACCTAT	6	+	31107577-31107626	6p21.33a	Homo sapiens psoriasis susceptibility 1 candidate 1 (PSORS1C1), mRNA.				C6orf16; SEEK1; MGC132530	C6orf16; SEEK1; MGC132530
Homo sapiens	RefSeq	XM_943454.1	ILMN_46506	LOC646588	XM_943454.2	XM_943454.2		646588	113418971	XM_943454.2	LOC646588	XP_948547.1	ILMN_1701409	0002940468	S	1783	TGTCACTGTCTCCTAACAGTACTTAGCAGTGTCTGATGCATCACAGGGAG				7p15.2c	PREDICTED: Homo sapiens hypothetical protein LOC646588 (LOC646588), mRNA.					
Homo sapiens	Unigene	Hs.574434	ILMN_126615	HS.574434	Hs.574434		Hs.574434		82097131	DA932631			ILMN_1912130	0005490326	S	181	TGGGCCTGGGACAATGGACACAGCTGTACCTAGAAAAGCAGAAACAGCTG	17	+	70111651-70111700		DA932631 SPLEN2 Homo sapiens cDNA clone SPLEN2002314 5, mRNA sequence					
Homo sapiens	Unigene	Hs.582239	ILMN_134420	HS.582239	Hs.582239		Hs.582239		83151391	DB338438			ILMN_1833695	0001010136	S	372	CCTTGGTTCAGTGGGGTTCTTGGGAAGAAATGAAGTTCCTGCTCCTCTCT	5	-	101864244-101864293		DB338438 TESTI2 Homo sapiens cDNA clone TESTI2038389 3, mRNA sequence					
Homo sapiens	Unigene	Hs.524845	ILMN_100564	HS.524845	Hs.524845		Hs.524845		4311453	AI458874			ILMN_1843259	0002140767	S	156	ATGTCTGGTAGGGCAGGACTCTTGAACCCCATCTACACAGCAGCAGGGGC	12	+	126699536-126699585		tj55c11.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:2145428 3, mRNA sequence					
Homo sapiens	RefSeq	NM_173807.2	ILMN_5254	C1ORF101	NM_173807.3	NM_173807.3		257044	142353655	NM_173807.3	C1orf101	NP_776168.1	ILMN_1792088	0001500670	S	2586	GTCCAAGTGTCTACCTGGTAGCTTCTTTCCTCTTCGTCCTGATGCTGCTC	1	+	242865467-242865467:242869853-242869901	1q44b	Homo sapiens chromosome 1 open reading frame 101 (C1orf101), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC33370; RP11-523K4.1	MGC33370; RP11-523K4.1
Homo sapiens	RefSeq	NR_002799.1	ILMN_15058	LOC256880	NR_002799.1	NR_002799.1		256880	84872082	NR_002799.1	LOC256880		ILMN_3246909	0006620064	S	138	GAGGGGCGCGCGGTAGCGTCCCGGGTCCCCTAGCAGGGCTCTAGAGACCA	4	+	100871773-100871822	4q23b	Homo sapiens hypothetical LOC256880 (LOC256880), non-coding RNA.					
Homo sapiens	RefSeq	NM_006389.2	ILMN_659	HYOU1	NM_006389.2	NM_006389.2		10525	13699861	NM_006389.2	HYOU1	NP_006380.1	ILMN_1673649	0005700041	S	4051	CCCCTGACCCCCTGGGCTGACCAAAATGTGCTTTCTACTGTGAGTCCCTA	11	-	118420565-118420614	11q23.3e	Homo sapiens hypoxia up-regulated 1 (HYOU1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9020069] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9020069] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DKFZp686N08236; ORP150	DKFZp686N08236; ORP150
Homo sapiens	RefSeq	XR_015802.1	ILMN_178666	LOC645944	XR_015802.1	XR_015802.1		645944	113417371	XR_015802.1	LOC645944		ILMN_3285356	0001450270	M	3181	GTGCTTGACAGTCTTTCCAGCTGCTTCAGTTAATCCGCCTTCTACGGTAC				5q35.3d	PREDICTED: Homo sapiens misc_RNA (LOC645944), miscRNA.					
Homo sapiens	RefSeq	NM_014649.2	ILMN_164282	SAFB2	NM_014649.2	NM_014649.2		9667	116014330	NM_014649.2	SAFB2	NP_055464.1	ILMN_2069446	0007050670	S	3085	CTGCGAGTTTTCGGGTGGGCAGACGCACTGTTGAATCTGGTAGCCAGGGT	19	-	5587193-5587242	19p13.3b	Homo sapiens scaffold attachment factor B2 (SAFB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	KIAA0138	KIAA0138
Homo sapiens	RefSeq	NM_005739.2	ILMN_13970	RASGRP1	NM_005739.2	NM_005739.2		10125	6382080	NM_005739.2	RASGRP1	NP_005730.1	ILMN_1768958	0002760239	S	4671	TCAAGCCTAGTGTAAATTTCTGCATCTCACACGACTTTAGTTTGGCCAGG	15	-	36567823-36567872	15q14d	Homo sapiens RAS guanyl releasing protein 1 (calcium and DAG-regulated) (RASGRP1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9582122] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 9582122] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 9789079] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9582122] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]	V; CALDAG-GEFI; CALDAG-GEFII; MGC129999; RASGRP; MGC129998; hRasGRP1	V; CALDAG-GEFI; CALDAG-GEFII; MGC129999; RASGRP; MGC129998; hRasGRP1
Homo sapiens	RefSeq	XM_932532.1	ILMN_38023	LOC644953	XM_932532.1	XM_932532.1		644953	88943874	XM_932532.1	LOC644953	XP_937625.1	ILMN_1738912	0006520343	S	614	AAGGCACCCAGAGCACAGGGAGGCGCCAGAAGAGGAGCCTGGCTCCCCCA	1	-	226810090-226810118:226811664-226811684	1q42.13c	PREDICTED: Homo sapiens hypothetical protein LOC644953 (LOC644953), mRNA.					
Homo sapiens	RefSeq	NM_018297.2	ILMN_15318	NGLY1	NM_018297.2	NM_018297.2		55768	21314689	NM_018297.2	NGLY1	NP_060767.2	ILMN_1728779	0003780670	S	1883	GGAAGCAGAATTAAGCAGAGGAGATGGTGATGTCGCTTGGCAACACACCC	3	-	25736028-25736077	3p24.2a	Homo sapiens N-glycanase 1 (NGLY1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15358861] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [pmid 15358861] [evidence IDA]	Catalysis of the hydrolysis of an N4-(acetyl-beta-D-glucosaminyl)asparagine residue in which the N-acetyl-D-glucosamine residue may be further glycosylated, to yield a (substituted) N-acetyl-beta-D-glucosaminylamine and the peptide containing an aspartic residue [goid 224] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15358861] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ11005; FLJ12409; PNG1	FLJ11005; FLJ12409; PNG1
Homo sapiens	RefSeq	NR_024409.1	ILMN_370184	LOC100128164	NR_024409.1	NR_024409.1		100128164	212276180	NR_024409.1	LOC100128164		ILMN_3237165	0007150593	S	1197	GCAGACATTCTAGGGGTAGGGAGTTCTAAAGCCTTGGTGCACTTGAATGG				3q26.2b	Homo sapiens hypothetical LOC100128164 (LOC100128164), non-coding RNA.					
Homo sapiens	RefSeq	XR_041659.1	ILMN_338548	LOC728463	XR_041659.1	XR_041659.1		728463	169162023	XR_041659.1	LOC728463		ILMN_3299441	0003060088	M	1310	GCTTCCCTCCTGTATTATGTGTGCACACGCACCCCTATGGGAGGGAGCAC				1q41c	PREDICTED: Homo sapiens hypothetical protein LOC728463 (LOC728463), miscRNA.					
Homo sapiens	Unigene	Hs.448059	ILMN_93404	HS.448059	Hs.448059		Hs.448059		5030941	AB016902			ILMN_1899338	0002510671	S	818	TGCAGTGGTTTCTCTGGTCACTCACGGTCCAGCACTAGCACGCAGCAGTC	6	-	168119600-168119649		Homo sapiens HGC6.3 mRNA, complete cds					
Homo sapiens	RefSeq	NM_182896.1	ILMN_8724	ARL13B	NM_182896.1	NM_182896.1		200894	33598955	NM_182896.1	ARL13B	NP_878899.1	ILMN_1777301	0005050471	I	389	ACCGCAACAGCAAAGGGAATCCAAGGAGAATACCCTGAAGATGTAGCTCC	3	+	93714761-93714788:93722503-93722524	3q11.2a	Homo sapiens ADP-ribosylation factor-like 13B (ARL13B), transcript variant 1, mRNA.		The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC120612; ARL2L1; DKFZp761H079; MGC120611; DKFZp686M2074; DKFZp686L2472; DKFZp686E2075	MGC120612; ARL2L1; DKFZp761H079; MGC120611; DKFZp686M2074; DKFZp686L2472; DKFZp686E2075
Homo sapiens	RefSeq	XM_943857.1	ILMN_34978	LOC649703	XM_943857.1	XM_943857.1		649703	89032016	XM_943857.1	LOC649703	XP_948950.1	ILMN_1795126	0004480598	S	730	ACGGACCACGGCAAGCCACCCACGAACCCGAGCAAAGACGCCAAAAACGA					PREDICTED: Homo sapiens hypothetical protein LOC649703 (LOC649703), mRNA.					
Homo sapiens	RefSeq	XM_933108.1	ILMN_138405	LOC645745	XM_933108.1	XM_933108.1		645745	88943918	XM_933108.1	LOC645745	XP_938201.1	ILMN_1666190	0001410376	S	121	GAGAGCACCGAGAGGCTATGGAAGCTCACTTCTGAGGCCCAGTCCCCCCG	1	-	235242071-235242120	1q43a	PREDICTED: Homo sapiens hypothetical protein LOC645745 (LOC645745), mRNA.					
Homo sapiens	RefSeq	XM_001715677.1	ILMN_345614	NT5DC4	XM_001715677.1	XM_001715677.1		284958	169163709	XM_001715677.1	NT5DC4	XP_001715729.1	ILMN_3226418	0006130095	A	1849	AAGAAGCGTCAGGGCTGGCGGACTTGCCTGGTGGTTCCTGAGCTGTCCTG				2q13d	PREDICTED: Homo sapiens 5'-nucleotidase domain containing 4 (NT5DC4), mRNA.			Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	XR_039868.1	ILMN_352850	LOC729467	XR_039868.1	XR_039868.1		729467	169161669	XR_039868.1	LOC729467		ILMN_3306691	0001400064	M	1158	TTCCACTAGGTGGGAAGCTTAGGGTAGTGGGAAGAACATGGATTCAGGAC				1p32.1e	PREDICTED: Homo sapiens misc_RNA (LOC729467), miscRNA.					
Homo sapiens	RefSeq	NM_000410.3	ILMN_175310	HFE	NM_000410.3	NM_000410.3		3077	91718876	NM_000410.3	HFE	NP_000401.1	ILMN_2302632	0007400367	A	117	AAGAAGCGGAGATTTAACGGGGACGTGCGGCCAGAGCTGGGGAAATGGGC	6	+	26087625-26087668:26087669-26087674	6p22.1d	Homo sapiens hemochromatosis (HFE), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10085150] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10638746] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10638746] [evidence TAS]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10638746] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [pmid 10085150] [evidence TAS]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [pmid 10638746] [evidence TAS]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 10085150] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]	MGC103790; HFE1; HLA-H; HH; dJ221C16.10.1	MGC103790; HFE1; HLA-H; HH; dJ221C16.10.1
Homo sapiens	RefSeq	NM_176882.1	ILMN_10516	TAS2R40	NM_176882.1	NM_176882.1		259286	28882032	NM_176882.1	TAS2R40	NP_795363.1	ILMN_1760732	0000010576	S	880	GTACAACTGATCTTGGGCAACCCTGGGCTGAGAAGAGCCTGGAAGCGGTT	7	+	142630173-142630222	7q34f	Homo sapiens taste receptor, type 2, member 40 (TAS2R40), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	MGC126844; GPR60; T2R40; MGC126846	MGC126844; GPR60; T2R40; MGC126846
Homo sapiens	RefSeq	NM_001898.2	ILMN_14080	CST1	NM_001898.2	NM_001898.2		1469	19882250	NM_001898.2	CST1	NP_001889.2	ILMN_1753449	0006370541	S	476	ATCCAGGTGTCAAGAATCCTAGGGATCTGTGCCAGGCCATTCGCACCAGC	20	-	23728424-23728452:23728453-23728473	20p11.21b	Homo sapiens cystatin SN (CST1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [pmid 3446578] [evidence TAS]		
Homo sapiens	RefSeq	NM_006382.1	ILMN_2728	CDRT1	NM_006382.2	NM_006382.2		374286	142370828	NM_006382.2	CDRT1	NP_006373.1	ILMN_1754658	0004250017	I	575	GCCTGACGTGTCCCTTCTCTTCCTCCGGATCATCAGCGCCTGTGCAAATG				17p12a	Homo sapiens CMT1A duplicated region transcript 1 (CDRT1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SM25H2; HREP	SM25H2; HREP
Homo sapiens	RefSeq	NM_199482.2	ILMN_10571	MOBKL3	NM_199482.2	NM_199482.2		25843	155030222	NM_199482.2	MOBKL3	NP_955776.1	ILMN_3306168	0006940307	M	2433	GCAGTGTAGCTGTTCTCTCTAGATGGTGTCTCACAATGGATTTCTGTTGC	2	+	198125341-198125390	2q33.1b	Homo sapiens MOB1, Mps One Binder kinase activator-like 3 (yeast) (MOBKL3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2C4D; MGC12264; MOB1; CGI-95; PREI3; MOB3	2C4D; MGC12264; MOB1; CGI-95; MOB3
Homo sapiens	RefSeq	XR_039334.1	ILMN_334910	LOC100131905	XR_039334.1	XR_039334.1		100131905	169204072	XR_039334.1	LOC100131905		ILMN_3275489	0006650603	M	2	CAGCGGTGACGACCTACCCACACAAGAACATGCCTCTCGCAAAGGATCTC	12	-	41359172-41359221	12q12e	PREDICTED: Homo sapiens misc_RNA (LOC100131905), miscRNA.					
Homo sapiens	RefSeq	NM_001747.2	ILMN_2712	CAPG	NM_001747.2	NM_001747.2		822	63252912	NM_001747.2	CAPG	NP_001738.2	ILMN_1655821	0003840367	S	1129	CTATATCTGGAAGGGGCGAAAAGCGAATGAGAAGGAGCGGCAGGCAGCCC	2	-	85622713-85622749:85625143-85625155	2p11.2g	Homo sapiens capping protein (actin filament), gelsolin-like (CAPG), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [pmid 1322908] [evidence TAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 1322908] [evidence NAS]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IEA]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [pmid 1322908] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AFCP; MCP	AFCP; MCP
Homo sapiens	RefSeq	NM_152738.1	ILMN_27124	C6ORF218	NM_152738.1	NM_152738.1		221718	22749456	NM_152738.1	C6orf218	NP_689951.1	ILMN_1665824	0003780373	S	525	GGGGATTACCCCAGGAGTCTGTGGCAAAAGTCAGCTTCTTCCCTCCCTGC	6	-	10538166-10538215	6p24.3a	Homo sapiens chromosome 6 open reading frame 218 (C6orf218), mRNA.				MGC40222	MGC40222
Homo sapiens	Unigene	Hs.534809	ILMN_102578	HS.534809	Hs.534809		Hs.534809		66263136	DR003263			ILMN_1889547	0001240458	S	355	CGCAGGCGCTGTAACTCCTCTAGGCCAAACCTCCAAACCCTGGGAACCAA	7	-	150708195-150708244		TC121268 Human fetal brain, large insert, pCMV expression library Homo sapiens cDNA clone TC121268 5 similar to PREDICTED: Homo sapiens hypothetical LOC401433 (LOC401433), mRNA sequence					
Homo sapiens	RefSeq	XM_937384.1	ILMN_163789	LOC648343	XR_018327.1	XR_018327.1		648343	113414237	XR_018327.1	LOC648343		ILMN_1690295	0003370201	A	38	AATTTGGCCGCGGTTCTCGCTCTTGTCGCGTCTGCTCAAACCAGCACGGT				2q33.3d	PREDICTED: Homo sapiens similar to protein phosphatase 1 regulatory subunit 14B (LOC648343), mRNA.					
Homo sapiens	RefSeq	XM_001127111.2	ILMN_178499	LOC728297	XM_001127111.2	XM_001127111.2		728297	169177308	XM_001127111.2	LOC728297	XP_001127111.1	ILMN_3229397	0002470246	A	79	CAAATTGTCTTCCAGGGTTTCAATGTGCATTTTATTAACTCAGAATCTGT	9	+	45252101-45252150	9p11.2b	PREDICTED: Homo sapiens similar to hCG2039164 (LOC728297), mRNA.					
Homo sapiens	RefSeq	NM_031246.1	ILMN_1426	PSG2	NM_031246.1	NM_031246.1		5670	13702710	NM_031246.1	PSG2	NP_112536.1	ILMN_2188141	0004290397	S	1083	CCAACATAGCAGCTGTGATGTCATTTCTGTATTTCAGGAAGACTGGCAGG	19	-	48260592-48260593:48262509-48262548:48262549-48262556	19q13.31a	Homo sapiens pregnancy specific beta-1-glycoprotein 2 (PSG2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 3260773] [evidence NAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 3260773] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 3260773] [evidence ND ]	PSBG2; PSGGB; CEA; PSG1	PSG1; PSBG2; PSGGB; CEA
Homo sapiens	RefSeq	NM_031246.1	ILMN_1426	PSG2	NM_031246.1	NM_031246.1		5670	13702710	NM_031246.1	PSG2	NP_112536.1	ILMN_1764483	0001740408	S	788	CCTCCATGGTCCAGACCTCCCCAGAATTCACCCTTCATACACCAATTACC	19	-	48267901-48267946:48271346-48271349	19q13.31a	Homo sapiens pregnancy specific beta-1-glycoprotein 2 (PSG2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 3260773] [evidence NAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 3260773] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 3260773] [evidence ND ]	PSBG2; PSGGB; CEA; PSG1	PSG1; PSBG2; PSGGB; CEA
Homo sapiens	RefSeq	NM_144967.2	ILMN_29759	FLJ30058	NM_144967.2	NM_144967.2		158763	40255079	NM_144967.2	FLJ30058	NP_659404.2	ILMN_1705466	0005700095	S	2604	GTACAGTTTTGCTCAGGTCACGCCAACAGGGAAACCTCAAGTGTAGGTCT	X	+	130051055-130051104	Xq26.1b	Homo sapiens hypothetical protein FLJ30058 (FLJ30058), mRNA.				RP13-102H20.1	RP13-102H20.1
Homo sapiens	RefSeq	XM_944769.1	ILMN_31025	LOC389111	XM_944769.1	XM_944769.1		389111	88969013	XM_944769.1	LOC389111	XP_949862.1	ILMN_1662603	0005550523	A	350	AAGCCCCTATCTGAGCAGCCTCTGTCTCTCCCATTCACCTCCAGCTTCCC					PREDICTED: Homo sapiens hypothetical LOC389111 (LOC389111), mRNA.					
Homo sapiens	RefSeq	XM_928918.1	ILMN_46471	LOC645951	XM_928918.1	XM_928918.1		645951	89057922	XM_928918.1	LOC645951	XP_934011.1	ILMN_1711715	0006760491	S	3690	CGCAAGGACAGAGGGCCCATCCCTGTTGTGGATGGCACTTTCAGTGTGGA	20	-	60382432-60382481		PREDICTED: Homo sapiens hypothetical protein LOC645951 (LOC645951), mRNA.					
Homo sapiens	RefSeq	NM_018149.5	ILMN_17502	C17ORF71	NM_018149.5	NM_018149.5		55181	47894117	NM_018149.5	C17orf71	NP_060619.4	ILMN_1807533	0002490377	S	2925	CCCCCCTAAGGAAAATGTGCAGTTAATGAGCTACAAGGTGCTCCGTGGGG	17	+	54647073-54647122	17q22d	Homo sapiens chromosome 17 open reading frame 71 (C17orf71), mRNA.				FLJ10587	FLJ10587
Homo sapiens	RefSeq	NM_004485.2	ILMN_306826	GNG4	NM_001098721.1	NM_001098721.1		2786	148922891	NM_001098721.1	GNG4	NP_001092191.1	ILMN_1804357	0004050671	S	1529	CTGTAAAAGTACCCCATACCGTTGACGCGCTGTGGCAGACCTGTGGGTGC	1	-	235714386-235714435	1q42.3c	Homo sapiens guanine nucleotide binding protein (G protein), gamma 4 (GNG4), transcript variant 2, mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7665596] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 7665596] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 15824735] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	DKFZp547K1018; FLJ23803; FLJ34187	
Homo sapiens	RefSeq	XM_941428.1	ILMN_43688	LOC652097	XM_941428.1	XM_941428.1		652097	89036513	XM_941428.1	LOC652097	XP_946521.1	ILMN_1719782	0002470347	S	260	AACATCTTTCCTCCCACCTGTCCCCCGCCAGGTCTGCCAGACCCGTCTCA					PREDICTED: Homo sapiens hypothetical protein LOC652097 (LOC652097), mRNA.					
Homo sapiens	RefSeq	NM_033363.1	ILMN_17557	MRPS12	NM_033363.1	NM_033363.1		6183	16950590	NM_033363.1	MRPS12	NP_203527.1	ILMN_2371964	0001850370	A	912	CACTGTACTGCCCTCTGCTGGGAAGGGGTTTTAATAAACAGACCCTGGCG	19	+	39423598-39423647	19q13.2a	Homo sapiens mitochondrial ribosomal protein S12 (MRPS12), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [pmid 9545647] [evidence TAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 9545647] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12970870] [evidence IPI]	MPR-S12; MT-RPS12; RPS12; RPSM12; RPMS12	MPR-S12; MT-RPS12; RPS12; RPSM12; RPMS12
Homo sapiens	RefSeq	NM_130795.2	ILMN_3428	RGS3	NM_130795.2	NM_130795.2		5998	62865650	NM_130795.2	RGS3	NP_570613.2	ILMN_2248655	0000130253	I	2	TGGGGAGGTGAGAGGTGATTTCCTGCCATTCTTCTGTGGGGCGGGCTTCC	9	+	115303529-115303578	9q32c	Homo sapiens regulator of G-protein signaling 3 (RGS3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9858594] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [pmid 8602223] [evidence TAS]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9858594] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9858594] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C2PA; PDZ-RGS3; FLJ90496; FLJ20370; FLJ31516; RGP3	C2PA; PDZ-RGS3; FLJ90496; FLJ20370; FLJ31516; RGP3
Homo sapiens	RefSeq	NM_001008529.1	ILMN_8451	MXRA7	NM_001008529.1	NM_001008529.1		439921	56549132	NM_001008529.1	MXRA7	NP_001008529.1	ILMN_1692077	0005550500	I	531	TTGAGCTGACCTCTGACCTCACTTCCCTGTAGCAAGTTCCTTAGGTCCTG	17	-	74679957-74679975:74679976-74680006	17q25.1d-q25.2a	Homo sapiens matrix-remodelling associated 7 (MXRA7), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TMAP1; PS1TP1; FLJ46603; FLJ41492	FLJ46603; TMAP1; PS1TP1; FLJ41492
Homo sapiens	RefSeq	NM_015515.3	ILMN_165093	KRT23	NM_015515.3	NM_015515.3		25984	27894338	NM_015515.3	KRT23	NP_056330.3	ILMN_1791545	0000630152	I	1117	GGGCCTCCGAAGGACCTTAGACAACCTGACCATTGTCACAACAGACCTAG	17	-	39086250-39086299	17q21.2a	Homo sapiens keratin 23 (histone deacetylase inducible) (KRT23), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC26158; CK23; DKFZP434G032; K23; HAIK1	MGC26158; CK23; DKFZP434G032; K23; HAIK1
Homo sapiens	RefSeq	NM_019004.1	ILMN_309668	ANKIB1	NM_019004.1	NM_019004.1		54467	148596952	NM_019004.1	ANKIB1	NP_061877.1	ILMN_3241218	0002970672	S	5729	CCTTGCACCTTGTGCAGTATCCTTTATTTCTGTGCTGTTCTCTCCTGAGC	7	+	91868282-91868331	7q21.2a-q21.2b	Homo sapiens ankyrin repeat and IBR domain containing 1 (ANKIB1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP434A0225; KIAA1386; FLJ33123	DKFZP434A0225; KIAA1386; FLJ33123
Homo sapiens	RefSeq	NM_016096.2	ILMN_9764	ZNF706	NM_016096.3	NM_016096.3		51123	110227592	NM_016096.3	ZNF706	NP_057180.1	ILMN_1702384	0007610189	S	2655	CATCCCCATGTTTAACTGACACACTGGGGGCTCAGTTGTGTGCTGTAATG	8	-	102278482-102278531	8q22.3a	Homo sapiens zinc finger protein 706 (ZNF706), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PNAS-113; HSPC038; PNAS-106	HSPC038; PNAS-106
Homo sapiens	RefSeq	NM_182563.2	ILMN_5044	C16ORF79	NM_182563.2	NM_182563.2		283870	34222374	NM_182563.2	C16orf79	NP_872369.1	ILMN_1759411	0000060220	S	762	AGCAGAGGGGCCCCGGAGACAGCGGCTGATTTATCTCTGCATCGACATCT	16	-	2259415-2259457:2259554-2259560	16p13.3d	Homo sapiens chromosome 16 open reading frame 79 (C16orf79), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC21830	MGC21830
Homo sapiens	RefSeq	NR_031615.1	ILMN_388713	MIR548J	NR_031615.1	NR_031615.1		100313914	269847124	NR_031615.1	MIR548J		ILMN_3308020	0007160333	S	57	TCAGTGGCAAAAACTGCATTACTTTTGCACCAGCCTACTAGAACGCTGAG					Homo sapiens microRNA 548j (MIR548J), microRNA.					
Homo sapiens	Unigene	Hs.542155	ILMN_106144	HS.542155	Hs.542155		Hs.542155		3241521	AI025908			ILMN_1914263	0003360240	S	33	TGGGAGCATTAAGAGCTGCTACTATACACCGAGCCCTCTTCTAGGGTGGG	2	+	19806752-19806801		ov95e03.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1645084 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006238.2	ILMN_139271	PPARD	NM_006238.2	NM_006238.2		5467	29171748	NM_006238.2	PPARD	NP_006229.1	ILMN_1674282	0002630168	I	3050	ACCTACCCAGCTGATGGGGGTTGGGGTGCTTCCTTTCAGGCCAAGGCTAT	6	+	35503663-35503712	6p21.31c	Homo sapiens peroxisome proliferative activated receptor, delta (PPARD), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11551955] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISS]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [pmid 15793256] [evidence NAS]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 1333051] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence ISS]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence ISS]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [pmid 15192438] [evidence TAS]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [pmid 15803109] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11551955] [evidence IMP]; Attachment of the blastocyst to the uterine lining [goid 7566] [pmid 11551955] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 15192438] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11847022] [evidence TAS]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [evidence ISS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14068] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [pmid 15793256] [evidence NAS]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [pmid 10991946] [evidence NAS]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [pmid 11551955] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11551955] [evidence NAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [pmid 1333051] [evidence TAS]; Interacting selectively with fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 5504] [evidence NAS]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 9113987] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PPARB; NUCI; FAAR; PPAR-beta; NUC1; NUCII; MGC3931; NR1C2	PPARB; NUCI; FAAR; PPAR-beta; NUC1; NUCII; MGC3931; NR1C2
Homo sapiens	RefSeq	NM_032121.3	ILMN_25069	MAGT1	NM_032121.4	NM_032121.4		84061	141801933	NM_032121.4	MAGT1	NP_115497.3	ILMN_1721349	0003190626	S	2092	GATATGAAAATTGGCTGGGCTTGGTGGCTCATGCCTGTGGTCCTAGCTAC	X	-	76970259-76970308	Xq21.1a	Homo sapiens magnesium transporter 1 (MAGT1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [pmid 15835887] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [pmid 12887896] [evidence TAS]	Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [pmid 12887896] [evidence TAS]	RP11-217H1.1; OST3B; IAP; bA217H1.1; PRO0756; DKFZp564K142; MGC64926; FLJ14726	RP11-217H1.1; bA217H1.1; PRO0756; MGC64926; FLJ14726
Homo sapiens	RefSeq	XM_936598.1	ILMN_38867	LOC647540	XM_936598.1	XM_936598.1		647540	89028636	XM_936598.1	LOC647540	XP_941691.1	ILMN_1660980	0006960463	S	462	CCAACAACTGAAACGGACTCTGAAAACACGAGCCATGGAATTGAGGACAG				8q11.21a	PREDICTED: Homo sapiens similar to pote protein (LOC647540), mRNA.					
Homo sapiens	RefSeq	NM_015704.1	ILMN_13640	PPPDE2	NM_015704.1	NM_015704.1		27351	63055039	NM_015704.1	PPPDE2	NP_056519.1	ILMN_1737580	0000380541	S	418	GGCACAGTTCCTGACTGGGCGGAAGATTCCTTCTTACATCACAGACCTGC	22	-	41999281-41999330	22q13.2a	Homo sapiens PPPDE peptidase domain containing 2 (PPPDE2), mRNA.				DJ347H13.4; D15Wsu75e; MGC138384	D15Wsu75e; MGC138384; DJ347H13.4
Homo sapiens	RefSeq	XM_034717.11	ILMN_164302	LOC647500	XM_001128547.1	XM_001128547.1		647500	113411080	XM_001128547.1	LOC647500	XP_001128547.1	ILMN_1679073	0000150427	S	224	AGGTGCAGTTTCAGGAGAGGGAGCTGGCCGAATTGCCGAGGTCAGCTGCA	1	+	142493872-142493921	1q21.1a	PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein isoform 1 (LOC647500), mRNA.					
Homo sapiens	RefSeq	NM_024697.1	ILMN_13191	ZNF385D	NM_024697.1	NM_024697.1		79750	13375980	NM_024697.1	ZNF385D	NP_078973.1	ILMN_1710268	0006380646	S	1549	GGACCCATTCGGACCGCCCACACTCCTGTGCTGTTTGCTCCTTACTAAAT	3	-	21437707-21437709:21437710-21437756	3p24.3b	Homo sapiens zinc finger protein 385D (ZNF385D), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF659; FLJ22419	ZNF659; FLJ22419
Homo sapiens	RefSeq	NM_000078.1	ILMN_162224	CETP	NM_000078.1	NM_000078.1		1071	4557442	NM_000078.1	CETP	NP_000069.1	ILMN_1681882	0004230703	S	1150	CCACTGCCTCAAGATGCCCAAGATCTCCTGCCAAAACAAGGGAGTCGTGG	16	+	55569542-55569591	16q13b	Homo sapiens cholesteryl ester transfer protein, plasma (CETP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3104518] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [pmid 2833496] [evidence IDA]; A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process [goid 34364] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [pmid 2833496] [evidence IDA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [pmid 2833496] [evidence IDA]; The acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid [goid 34372] [pmid 2833496] [evidence IDA]; The acquisition, loss or modification of a protein or lipid within a low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL [goid 34374] [pmid 2833496] [evidence IDA]; The acquisition, loss or modification of a protein or lipid within a high-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL [goid 34375] [pmid 2586614] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 2586614] [evidence IMP]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IEA]; The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes [goid 46470] [pmid 2833496] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of acylglycerol within an organism or cell [goid 55090] [pmid 2833496] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of phospholipid within an organism or cell [goid 55091] [pmid 2833496] [evidence IDA]	Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [pmid 2833496] [evidence IDA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [pmid 2833496] [evidence IDA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]; Interacting selectively with any triester of glycerol [goid 17129] [pmid 2833496] [evidence IDA]; Interacting selectively with phosphatidylcholine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of choline [goid 31210] [pmid 2833496] [evidence IDA]	HDLCQ10	
Homo sapiens	RefSeq	NM_000078.1	ILMN_162224	CETP	NM_000078.1	NM_000078.1		1071	4557442	NM_000078.1	CETP	NP_000069.1	ILMN_2098013	0005420646	S	1733	TGGCTCCCAACTCCTCCCTATCCTAAAGGCCCACTGGCATTAAAGTGCTG	16	+	55575200-55575249	16q13b	Homo sapiens cholesteryl ester transfer protein, plasma (CETP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3104518] [evidence IDA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [pmid 2833496] [evidence IDA]; A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process [goid 34364] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [pmid 2833496] [evidence IDA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [pmid 2833496] [evidence IDA]; The acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid [goid 34372] [pmid 2833496] [evidence IDA]; The acquisition, loss or modification of a protein or lipid within a low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL [goid 34374] [pmid 2833496] [evidence IDA]; The acquisition, loss or modification of a protein or lipid within a high-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL [goid 34375] [pmid 2586614] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 2586614] [evidence IMP]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IEA]; The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes [goid 46470] [pmid 2833496] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of acylglycerol within an organism or cell [goid 55090] [pmid 2833496] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of phospholipid within an organism or cell [goid 55091] [pmid 2833496] [evidence IDA]	Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [pmid 2833496] [evidence IDA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [pmid 2833496] [evidence IDA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]; Interacting selectively with any triester of glycerol [goid 17129] [pmid 2833496] [evidence IDA]; Interacting selectively with phosphatidylcholine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of choline [goid 31210] [pmid 2833496] [evidence IDA]	HDLCQ10	HDLCQ10
Homo sapiens	RefSeq	NM_000751.1	ILMN_23206	CHRND	NM_000751.1	NM_000751.1		1144	4557460	NM_000751.1	CHRND	NP_000742.1	ILMN_1661355	0003170739	S	1421	TGCCTGTTTGTGGTGACGCCTGTCATGGTGGTGGGCACAGCCTGGATCTT	2	+	233108129-233108178	2q37.1c	Homo sapiens cholinergic receptor, nicotinic, delta (CHRND), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 8872460] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8872460] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8872460] [evidence TAS]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]	 [goid 4889] [pmid 8872460] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IEA]	FCCMS; ACHRD; CMS2A; SCCMS	FCCMS; ACHRD; CMS2A; SCCMS
Homo sapiens	RefSeq	NM_177454.2	ILMN_12991	FAM171B	NM_177454.3	NM_177454.3		165215	116875847	NM_177454.3	FAM171B	NP_803237.3	ILMN_1653376	0006060026	S	3176	GGCAAGAAGCTACTTGGTCATTAGAGAGGGAGACACCAGCTCTTTGGTTG	2	+	187336378-187336427	2q32.1e	Homo sapiens family with sequence similarity 171, member B (FAM171B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ34104	FLJ34104
Homo sapiens	RefSeq	NM_005734.2	ILMN_20690	HIPK3	NM_005734.3	NM_005734.3		10114	114796623	NM_005734.3	HIPK3	NP_005725.3	ILMN_1746941	0003060730	S	3669	GGCCCACCTGTTAGCCTCTCCGTGTACCTCAAGACCTATGTTACAGCATC	11	+	33325763-33325812	11p13d	Homo sapiens homeodomain interacting protein kinase 3 (HIPK3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 14766760] [evidence IMP]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [pmid 11034606] [evidence ISS]; The posttranslational phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine [goid 18107] [pmid 11034606] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of JUN kinase activity [goid 43508] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11034606] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DYRK6; PKY; YAK1; FIST3	DYRK6; PKY; YAK1
Homo sapiens	RefSeq	XR_039139.1	ILMN_351993	LOC650860	XR_039139.1	XR_039139.1		650860	169217840	XR_039139.1	LOC650860		ILMN_3248777	0000940121	S	810	TGAGGTCATCAATGCCTGAGAGGTGGCCCCCAGGCTGGCCTTTGCCAGCA					PREDICTED: Homo sapiens misc_RNA (LOC650860), miscRNA.					
Homo sapiens	RefSeq	XR_038586.1	ILMN_350656	LOC100128115	XR_038586.1	XR_038586.1		100128115	169213047	XR_038586.1	LOC100128115		ILMN_3271081	0004250278	M	210	CTGGGTTTACAGGAAGAAATATGTCCTCTACATTGAATGGGTGCAACGGG				18q23b	PREDICTED: Homo sapiens misc_RNA (LOC100128115), miscRNA.					
Homo sapiens	RefSeq	NR_024455.1	ILMN_371709	LOC100133612	NR_024455.1	NR_024455.1		100133612	213021183	NR_024455.1	LOC100133612		ILMN_3247080	0000060343	S	1771	CCAGTGCCCAGTGAAGTGTGGGGGGCTGGACATAGGTGGCCTCAGTTCCT	1	+	3831830-3831879		Homo sapiens similar to hCG1815312 (LOC100133612), non-coding RNA.					
Homo sapiens	RefSeq	NM_001114403.1	ILMN_336401	UPLP	NM_001114403.1	NM_001114403.1		100134938	167555122	NM_001114403.1	UPLP	NP_001107875.1	ILMN_3236765	0000430189	S	1292	CCCAAAGCTTGTGCCAGTCTCTATCAGAAATAAATGCCCCCAAAACCTCA					Homo sapiens uroplakin-like protein (UPLP), mRNA.					
Homo sapiens	RefSeq	XM_931952.3	ILMN_41978	LOC643972	XM_931952.3	XM_931952.3		643972	169173016	XM_931952.3	LOC643972	XP_937045.3	ILMN_3274775	0005050097	M	182	GCCATCGCTCACTGACCCAGGAAGGTGTCAAACGAGGAAGTAGCAGCAGT	8	-	104102595-104102644	8q22.3c	PREDICTED: Homo sapiens hypothetical LOC643972 (LOC643972), mRNA.					
Homo sapiens	RefSeq	NM_020311.1	ILMN_2147	CXCR7	NM_020311.2	NM_020311.2		57007	114155149	NM_020311.2	CXCR7	NP_064707.1	ILMN_1798360	0000450424	S	1890	TCTGTGTGGTGTTTTGTACCGGCACGGGATATGGAACGAAAACTGCTTTG	2	+	237155523-237155572	2q37.3a	Homo sapiens chemokine (C-X-C motif) receptor 7 (CXCR7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CMKOR1; GPR159; RDC1	GPR159; RDC1
Homo sapiens	RefSeq	XM_939445.1	ILMN_40449	LOC650361	XM_939445.1	XM_939445.1		650361	89034471	XM_939445.1	LOC650361	XP_944538.1	ILMN_1773252	0003120209	S	1279	CTGGGACCTCTGATACATCCTCCACTCGAACATCCTCTGGGACCTGAAAC					PREDICTED: Homo sapiens hypothetical protein LOC650361 (LOC650361), mRNA.					
Homo sapiens	RefSeq	NM_002952.3	ILMN_39348	LOC440589	XM_942424.2	XM_942424.2		440589	113412067	XM_942424.2	LOC440589	XP_947517.1	ILMN_1737074	0005870328	S	349	GTTGCTATCGGGGACTACAATGGCCACGTCGGTCTGGGTGTTAAGTGCTC				1p32.3e	PREDICTED: Homo sapiens similar to ribosomal protein S2, transcript variant 3 (LOC440589), mRNA.					MGC102851; LLREP3; MGC117344; MGC117345
Homo sapiens	RefSeq	XM_945956.1	ILMN_39348	LOC440589	XM_942424.2	XM_942424.2		440589	113412067	XM_942424.2	LOC440589	XP_947517.1	ILMN_1652768	0000130224	A	345	GTTTGTTGCTATCGGGGACTACAATGGCCACGTCGGTCTGGGTGTTAAGT				1p32.3e	PREDICTED: Homo sapiens similar to ribosomal protein S2, transcript variant 3 (LOC440589), mRNA.					
Homo sapiens	RefSeq	NM_052868.1	ILMN_5527	IGSF8	NM_052868.2	NM_052868.2		93185	141802780	NM_052868.2	IGSF8	NP_443100.1	ILMN_1730432	0005390273	S	2095	CCTTTAATTTATTTGACCTCCCACTACCCAGAATGGGAGACGTGCCTCCC	1	-	160061257-160061306	1q23.2c	Homo sapiens immunoglobulin superfamily, member 8 (IGSF8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11504738] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 11504738] [evidence NAS]; The union of male and female gametes to form a zygote [goid 7338] [pmid 11504738] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 11504738] [evidence NAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [pmid 11504738] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11504738] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11504738] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11504738] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	PGRL; CD81P3; EWI2; CD316	PGRL; CD81P3; EWI2; CD316
Homo sapiens	RefSeq	NM_182620.3	ILMN_21410	SKA2	NM_182620.3	NM_182620.3		348235	154689645	NM_182620.3	SKA2	NP_872426.1	ILMN_3250659	0001500228	M	2302	GGGGCTTCACCATCTTGACCAGGCTGGTCTTTAACTCCTGATGGTGATCC	17	-	57187928-57187977	17q22d	Homo sapiens spindle and kinetochore associated complex subunit 2 (SKA2), transcript variant 1, mRNA.				MGC110975; Ska2; FLJ12758	MGC110975; Ska2; FLJ12758
Homo sapiens	RefSeq	NM_182620.3	ILMN_21410	SKA2	NM_182620.3	NM_182620.3		348235	154689645	NM_182620.3	SKA2	NP_872426.1	ILMN_3249807	0000360743	A	2742	CTCAAGCCTCTTTGTGGATGACTCCTAAATATAACTTCTTCCACTAGCTC	17	-	57187488-57187537	17q22d	Homo sapiens spindle and kinetochore associated complex subunit 2 (SKA2), transcript variant 1, mRNA.				MGC110975; Ska2; FLJ12758	MGC110975; Ska2; FLJ12758
Homo sapiens	RefSeq	NM_182620.1	ILMN_21410	SKA2	NM_182620.3	NM_182620.3		348235	154689645	NM_182620.3	SKA2	NP_872426.1	ILMN_1807807	0000610082	S	726	GTCTAGAGATTGGGGGCTGGTGAAGGGGGTTTGGCTTCAATGACTGGATA	17	-	57189504-57189553	17q22d	Homo sapiens spindle and kinetochore associated complex subunit 2 (SKA2), transcript variant 1, mRNA.				MGC110975; Ska2; FLJ12758	FLJ12758
Homo sapiens	RefSeq	NM_100486.1	ILMN_28193	WAC	NM_100486.1	NM_100486.1		51322	18379331	NM_100486.1	WAC	NP_567823.1	ILMN_2323526	0000610341	A	2213	CCACACTTGCACCTGATCAAGAGCAGTGCTTCTCCATTTGTTTTGCAGAG	10	+	28949044-28949093	10p11.23c	Homo sapiens WW domain containing adaptor with coiled-coil (WAC), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	bA48B24; MGC10753; BM-016; Wwp4; PRO1741; bA48B24.1	bA48B24; MGC10753; BM-016; Wwp4; PRO1741; bA48B24.1
Homo sapiens	RefSeq	NM_181435.4	ILMN_13840	C1QTNF3	NM_030945.2	NM_030945.2		114899	62739184	NM_030945.2	C1QTNF3	NP_112207.1	ILMN_1768925	0005220639	A	1802	GATGATGTGAACAGCCATGTGAATAGGTGACTTGGGCACACAGCAGGGTC	5	-	34055421-34055470	5p13.3a	Homo sapiens C1q and tumor necrosis factor related protein 3 (C1QTNF3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			CTRP3; Cors; FLJ37576; Corcs; CORS26	CTRP3; Cors; FLJ37576; Corcs; CORS26
Homo sapiens	RefSeq	NM_173666.1	ILMN_25915	DTWD2	NM_173666.1	NM_173666.1		285605	27734778	NM_173666.1	DTWD2	NP_775937.1	ILMN_1794882	0006400327	S	789	GCTCCTTTCAACTTCAGCATGGTGCCCAAATTCGCCTCAGCAAGGAACAC	5	-	118204603-118204652	5q23.1c	Homo sapiens DTW domain containing 2 (DTWD2), mRNA.				MGC138579; MGC138580; FLJ33977	MGC138579; MGC138580; FLJ33977
Homo sapiens	RefSeq	NM_173666.1	ILMN_25915	DTWD2	NM_173666.1	NM_173666.1		285605	27734778	NM_173666.1	DTWD2	NP_775937.1	ILMN_2054554	0002940372	S	2261	CAGGAGTTTGAGACCAGCCTGGGCAATATGGTGAGACTCCATCTCCATAC				5q23.1c	Homo sapiens DTW domain containing 2 (DTWD2), mRNA.				MGC138579; MGC138580; FLJ33977	MGC138579; MGC138580; FLJ33977
Homo sapiens	RefSeq	XM_942599.1	ILMN_43771	LOC652882	XM_942599.1	XM_942599.1		652882	89060643	XM_942599.1	LOC652882	XP_947692.1	ILMN_1714539	0005360615	S	622	TGTTGCCAAGACAGCTGGAGAAGACTATGAGAGCTCATTGGACCTTGCAG					PREDICTED: Homo sapiens similar to Protein FAM3C precursor (Protein GS3786) (LOC652882), mRNA.					
Homo sapiens	RefSeq	NR_024090.1	ILMN_363662	C21ORF131	NR_024090.1	NR_024090.1		387486	197116379	NR_024090.1	C21orf131		ILMN_3235163	0002650520	S	1804	CATCTTGAAAACAGCTGTCAGCCAGGAGGGCAGAGCTGAAATTTATTGCC	21	-	22115073-22115122		Homo sapiens chromosome 21 open reading frame 131 (C21orf131), non-coding RNA.					
Homo sapiens	RefSeq	NM_133457.2	ILMN_7910	EMID2	NM_133457.2	NM_133457.2		136227	118498338	NM_133457.2	EMID2	NP_597714.2	ILMN_3248505	0005560327	S	2730	GACCTGGGACACAGCCACGGCAGCAAACTCAGAGAATTGAAGGTGCTGGC	7	+	100988749-100988798	7q22.1d	Homo sapiens EMI domain containing 2 (EMID2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC129848; hEmu2; EMI6; EMU2; COL26A1	MGC129848; hEmu2; EMI6; EMU2; COL26A1
Homo sapiens	RefSeq	XM_939782.1	ILMN_38473	LOC654133	XM_939782.1	XM_939782.1		654133	89061745	XM_939782.1	LOC654133	XP_944875.1	ILMN_1754415	0001010390	S	8	GCCCAGATCTTATTACAGAAGGGTCTTTTAGAACTTTGCATCTTGTTCCT					PREDICTED: Homo sapiens similar to radical S-adenosyl methionine and flavodoxin domains 1 (LOC654133), mRNA.					
Homo sapiens	RefSeq	XM_001718697.1	ILMN_344010	LOC732146	XM_001718697.1	XM_001718697.1		732146	169164002	XM_001718697.1	LOC732146	XP_001718749.1	ILMN_3225617	0000730537	A	503	GACTGGGGGTCGGCAGCACTGAGAAGTGAAGGAATATTTGGGAGGATCAG					PREDICTED: Homo sapiens hypothetical LOC732146 (LOC732146), mRNA.					
Homo sapiens	RefSeq	NM_138402.3	ILMN_171177	SP140L	NM_138402.4	NM_138402.4		93349	134133278	NM_138402.4	SP140L	NP_612411.4	ILMN_1658858	0003610576	S	2030	GAGGAACTGAGATCACAGGGAAGGAGATTGGAGGTGATACCAGCACAGAC	2	+	230976051-230976100	2q37.1a	Homo sapiens SP140 nuclear body protein-like (SP140L), mRNA.				MGC132667	
Homo sapiens	RefSeq	NM_148903.1	ILMN_19956	GREB1	NM_148903.2	NM_148903.2		9687	116734675	NM_148903.2	GREB1	NP_683701.2	ILMN_1736956	0001980102	I	1968	GGAAAGATATTTGAACCCGACCTGGGCAATTCCACCTCTGAGGGCTGTCC	2	+	11645451-11645500	2p25.1b	Homo sapiens growth regulation by estrogen in breast cancer 1 (GREB1), transcript variant c, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA0575	KIAA0575
Homo sapiens	RefSeq	NM_148903.1	ILMN_19956	GREB1	NM_148903.2	NM_148903.2		9687	116734675	NM_148903.2	GREB1	NP_683701.2	ILMN_1715984	0004730379	A	1395	CAGTGGTGGCCTCTGGAGAACCAGTGTCTGTTCCTGACAACTTGCTGAAA	2	+	11643402-11643451	2p25.1b	Homo sapiens growth regulation by estrogen in breast cancer 1 (GREB1), transcript variant c, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA0575	KIAA0575
Homo sapiens	RefSeq	XM_001130893.1	ILMN_166574	LOC729643	XM_001130893.1	XM_001130893.1		729643	113422498	XM_001130893.1	LOC729643	XP_001130893.1	ILMN_3228746	0001090398	A	428	GAGGGTCGCTCCGCGCCTTTCCGTCAGTGAGGGTCGGAACCCCAGCTCCA	11	-	74914219-74914266:74914482-74914483	11q13.5a	PREDICTED: Homo sapiens similar to glycerophosphodiester phosphodiesterase domain containing 5 (LOC729643), mRNA.					
Homo sapiens	RefSeq	NM_002829.2	ILMN_2792	PTPN3	NM_002829.2	NM_002829.2		5774	18104985	NM_002829.2	PTPN3	NP_002820.2	ILMN_1717294	0001470746	S	3750	TGGGGCTGTGTACATGTGTGTGCCCAGGGGTGAGTGTTTCTCAGGATTCC	9	-	111180621-111180670	9q31.3a	Homo sapiens protein tyrosine phosphatase, non-receptor type 3 (PTPN3), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1648725] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 1648725] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp686N0569; PTPH1	DKFZp686N0569; PTPH1
Homo sapiens	RefSeq	XM_001722195.1	ILMN_352105	LOC729948	XM_001722195.1	XM_001722195.1		729948	169171901	XM_001722195.1	LOC729948	XP_001722247.1	ILMN_3306294	0004540433	M	78	ACAAGAAGTGTTTGTTTAATGAATGACGTACACATTTAAGATCTGTTTGG				7q32.1a	PREDICTED: Homo sapiens similar to CDC26 subunit of anaphase promoting complex (LOC729948), mRNA.					
Homo sapiens	RefSeq	NM_001004731.1	ILMN_19367	OR5AU1	NM_001004731.1	NM_001004731.1		390445	52317256	NM_001004731.1	OR5AU1	NP_001004731.1	ILMN_1790744	0002450068	S	803	CCTACTTCTTAATTCTCAACACCATCCTGAAAATGAGCTCGGCCCAGGGC	14	-	21623332-21623381	14q11.2c	Homo sapiens olfactory receptor, family 5, subfamily AU, member 1 (OR5AU1), mRNA.				OR14-38	OR14-38
Homo sapiens	RefSeq	NM_000840.2	ILMN_6748	GRM3	NM_000840.2	NM_000840.2		2913	46358416	NM_000840.2	GRM3	NP_000831.2	ILMN_1679532	0004040707	S	3703	GCGGGAAGTCCTCGACTCCACCACCTCATCTCTGTGATTGTGAATTGCAG	7	+	86306411-86306460	7q21.11g-q21.12a	Homo sapiens glutamate receptor, metabotropic 3 (GRM3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8840013] [evidence TAS]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IEA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 8840013] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8840013] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A G-protein coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity [goid 1641] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5246] [evidence IEA]	GLUR3; MGLUR3; GPRC1C; mGlu3	GLUR3; MGLUR3; GPRC1C; mGlu3
Homo sapiens	RefSeq	NM_000840.2	ILMN_6748	GRM3	NM_000840.2	NM_000840.2		2913	46358416	NM_000840.2	GRM3	NP_000831.2	ILMN_2078975	0003180730	S	3962	CCATTGTTTACAGAGCTGAGCATTGGTGACAGGGTCTGACATGGTCAGTC	7	+	86306670-86306719	7q21.11g-q21.12a	Homo sapiens glutamate receptor, metabotropic 3 (GRM3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8840013] [evidence TAS]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IEA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 8840013] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8840013] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A G-protein coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity [goid 1641] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5246] [evidence IEA]	GLUR3; MGLUR3; GPRC1C; mGlu3	GLUR3; MGLUR3; GPRC1C; mGlu3
Homo sapiens	RefSeq	NM_134445.2	ILMN_11518	CD99L2	NM_134445.2	NM_134445.2		83692	71067333	NM_134445.2	CD99L2	NP_604394.1	ILMN_2388142	0005420358	A	3303	TCCCTGTACATCTGTTCACGTGCTTGTGTCCAGGTGTGACTTGTAAACTG	X	-	149934845-149934894	Xq28c	Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD99B; DKFZp761H2024; MIC2L1	CD99B; DKFZp761H2024; MIC2L1
Homo sapiens	RefSeq	NM_134446.2	ILMN_11518	CD99L2	NM_134445.2	NM_134445.2		83692	71067333	NM_134445.2	CD99L2	NP_604394.1	ILMN_1700681	0001780079	A	3160	GCTCAAGGAAAGATAAAGCTGGGCGGAAGGAGGTGTGCGTGGCTTCTGGG	X	-	149934988-149935037	Xq28c	Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD99B; DKFZp761H2024; MIC2L1	CD99B; DKFZp761H2024; MIC2L1
Homo sapiens	RefSeq	NM_003129.3	ILMN_183123	SQLE	NM_003129.3	NM_003129.3		6713	62865634	NM_003129.3	SQLE	NP_003120.2	ILMN_2041293	0003120367	S	2534	GTCAGAACCTTGGATTACAAAACCTCGAGCCCTTCTCAGTAGTGGTGCTG	8	+	126034070-126034119	8q24.13d	Homo sapiens squalene epoxidase (SQLE), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10666321] [evidence EXP]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [pmid 9286711] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the formation of a 2,3-epoxide in squalene [goid 4506] [pmid 9286711] [evidence NAS]; Catalysis of the formation of a 2,3-epoxide in squalene [goid 4506] [pmid 10666321] [evidence EXP]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ30795	FLJ30795
Homo sapiens	RefSeq	NR_002209.1	ILMN_16912	CDH12P	NR_002209.1	NR_002209.1		1011	57528077	NR_002209.1	CDH12P		ILMN_2210739	0002100021	S	1	AAAGCTCCATTCCGACTTAGACAAGGGAGAGGGCACTGCGAAATACACCC	5	+	70036003-70036052	5q13.2a	Homo sapiens cadherin 12 (N-cadherin 2) pseudogene (CDH12P) on chromosome 5.				C41-CAD	C41-CAD
Homo sapiens	RefSeq	NM_031473.2	ILMN_22975	IFT81	NM_031473.2	NM_031473.2		28981	34147402	NM_031473.2	IFT81	NP_113661.2	ILMN_2254123	0000610167	I	2635	CTCACCTTGCCTAAAGTATATGAAGAGTGTGCTTTATGTCGAGCTCCTGC	12	+	109091121-109091170	12q24.11c	Homo sapiens intraflagellar transport 81 homolog (Chlamydomonas) (IFT81), transcript variant 2, mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		CDV1R; MGC102777; CDV-1R; CDV-1; CDV1; MGC4027	CDV1R; MGC102777; CDV-1R; CDV-1; CDV1; MGC4027
Homo sapiens	RefSeq	NM_005575.2	ILMN_15141	LNPEP	NM_005575.2	NM_005575.2		4012	61742776	NM_005575.2	LNPEP	NP_005566.2	ILMN_1798433	0000150372	I	326	CTCTTGCTTCCCTCGCTCTTTCTGCAGCTGCCACGAAAACCCGGAACGGC	5	+	96271671-96271720	5q15e	Homo sapiens leucyl/cystinyl aminopeptidase (LNPEP), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 15691326] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9177475] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9177475] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8550619] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8550619] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 8550619] [evidence TAS]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 15691326] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [pmid 9177475] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8550619] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P-LAP; PLAP; IRAP; CAP	P-LAP; PLAP; IRAP; CAP
Homo sapiens	RefSeq	NM_000641.2	ILMN_23651	IL11	NM_000641.2	NM_000641.2		3589	24430217	NM_000641.2	IL11	NP_000632.1	ILMN_1788107	0003400048	S	1887	GAGCAGGGACTGTCATTCAGGGAGGCTAAGGAGAGAGGCTTGCTTGGGAT	19	-	60567986-60568035	19q13.42b	Homo sapiens interleukin 11 (IL11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2145578] [evidence IC ]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2145578] [evidence IC ]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 2145578] [evidence IDA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence NAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 2145578] [evidence NAS]; The process by which a myeloid precursor cell acquires specializes features of a megakaryocyte [goid 30219] [pmid 2145578] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [pmid 7508917] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [pmid 7508917] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 1828438] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 7508917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [pmid 7867561] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [pmid 7508917] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-11 receptor [goid 5142] [pmid 2145578] [evidence NAS]	IL-11; AGIF	IL-11; AGIF
Homo sapiens	RefSeq	NM_001008711.1	ILMN_13386	RBPMS	NM_001008711.1	NM_001008711.1		11030	57164970	NM_001008711.1	RBPMS	NP_001008711.1	ILMN_1668608	0002230309	I	1202	AGGTCAGACTGTGAGGAGAAGCCACCCCTTGAGCGCTCCGTCTCCTGATA	8	+	30361776-30361825	8p12e	Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 2, mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8855282] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8855282] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	HERMES	HERMES
Homo sapiens	RefSeq	NM_001080467.1	ILMN_183965	MYO5B	NM_001080467.1	NM_001080467.1		4645	122937344	NM_001080467.1	MYO5B	NP_001073936.1	ILMN_2341548	0001440014	A	9204	TGCCACCAACTGACATTTAGATGAAGGACTGCCTCTCTGAAAGAGTTCAG	18	-	45603353-45603402	18q21.1f-q21.1g	Homo sapiens myosin VB (MYO5B), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	KIAA1119	KIAA1119
Homo sapiens	RefSeq	NM_004498.1	ILMN_1269	ONECUT1	NM_004498.1	NM_004498.1		3175	24307886	NM_004498.1	ONECUT1	NP_004489.1	ILMN_1727970	0000730324	S	1272	GGCAACACACCCAAAAAGCCCAGGTTGGTCTTCACAGATGTCCAGCGTCG	15	-	53049956-53050005	15q21.2c	Homo sapiens one cut homeobox 1 (ONECUT1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10491763] [evidence NAS]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HNF-6; HNF6; HNF6A	HNF-6; HNF6; HNF6A
Homo sapiens	RefSeq	NM_004498.1	ILMN_1269	ONECUT1	NM_004498.1	NM_004498.1		3175	24307886	NM_004498.1	ONECUT1	NP_004489.1	ILMN_2114812	0002680300	S	1758	CACCACTGGATCTCACACCTTCAATCCATGACCATCCTCGCTGTGCTTGG	15	-	53049470-53049519	15q21.2c	Homo sapiens one cut homeobox 1 (ONECUT1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10491763] [evidence NAS]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HNF-6; HNF6; HNF6A	HNF-6; HNF6; HNF6A
Homo sapiens	RefSeq	XM_116384.2	ILMN_9593	LOC646066	XM_116384.2	XM_116384.2		646066	51464849	XM_116384.2	LOC646066	XP_116384.2	ILMN_3244188	0003840241	S	184	TCAGCCTCAGCTCCTCCTGCAGCCAAAAGACGGAAAACACATACGAAAGG	5	+	17578527-17578576	5p15.1a	PREDICTED: Homo sapiens similar to TBP-associated factor 11 (LOC646066), mRNA.					
Homo sapiens	RefSeq	NM_016952.3	ILMN_12333	CDON	NM_016952.3	NM_016952.3		50937	71067337	NM_016952.3	CDON	NP_058648.3	ILMN_1699576	0005260114	I	7613	TTTTAGGGGACGCTGAGAACATACCTGACCCTGGGGGCGATGTGGAGGCA	11	-	125332307-125332356	11q24.2b	Homo sapiens Cdon homolog (mouse) (CDON), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9214393] [evidence TAS]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IEA]; The process by which the anatomical structures of the embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 10172] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11782431] [evidence IPI]	CDO; MGC111524; ORCAM	CDO; MGC111524; ORCAM
Homo sapiens	RefSeq	XM_941060.1	ILMN_46354	LOC651816	XM_941060.1	XM_941060.1		651816	89062188	XM_941060.1	LOC651816	XP_946153.1	ILMN_1729115	0001570746	S	542	AGGTGCCTGCTGATCCACCCTAACCCCGAGTCTGCACTCAACGAGGAGGC					PREDICTED: Homo sapiens similar to Ubiquitin-conjugating enzyme E2S (Ubiquitin-conjugating enzyme E2-24 kDa) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (E2-EPF5) (LOC651816), mRNA.					
Homo sapiens	Unigene	Hs.505855	ILMN_97602	HS.505855	Hs.505855		Hs.505855		11594286	BF510901			ILMN_1914073	0006510070	S	34	TTATTTCTTCCTGTCGCTTACACCCGAGGTGGGGGAGTTGGGGCTCACAG	1	-	153241980-153242005:153257565-153257588		UI-H-BI4-apl-a-12-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3087647 3, mRNA sequence					
Homo sapiens	RefSeq	NM_052870.2	ILMN_24881	SNX18	NM_052870.2	NM_052870.2		112574	157057542	NM_052870.2	SNX18	NP_443102.2	ILMN_3234093	0000380521	I	3005	CCAAATGCGTGACTGGTCTTCTGACTCCTATGGGGGAAGGGGCTTGCTGG	5	+	53816597-53816646	5q11.2d	Homo sapiens sorting nexin 18 (SNX18), transcript variant 2, mRNA.	A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14679214] [evidence IPI]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	FLJ32560; FLJ11997; MGC150829; SNX18; MGC150827; SH3PX2; SH3PXD3B	MGC150829; SNX18; MGC150827; SH3PX2; SH3PXD3B
Homo sapiens	RefSeq	XM_001724812.1	ILMN_335735	LOC100134140	XM_001724812.1	XM_001724812.1		100134140	169209461	XM_001724812.1	LOC100134140	XP_001724864.1	ILMN_3276510	0006520224	M	201	TGAGCCAGGCTGTGCACGGAGCGCCTGACGGGCCCAACAGACCCATGCTG					PREDICTED: Homo sapiens similar to LHPE306, transcript variant 3 (LOC100134140), mRNA.					
Homo sapiens	RefSeq	NM_001136482.1	ILMN_370731	C19ORF38	NM_001136482.1	NM_001136482.1		255809	210147580	NM_001136482.1	C19orf38	NP_001129954.1	ILMN_3240538	0000870133	S	903	CTTGGGATTTTCATCACAGAGGAGTGGGAGAGGGGACACAGGCATGGGCC	19	+	10980174-10980223	19p13.2b	Homo sapiens chromosome 19 open reading frame 38 (C19orf38), mRNA. XM_938361 XM_943649					
Homo sapiens	RefSeq	NM_172217.1	ILMN_6720	IL16	NM_172217.2	NM_172217.2		3603	148833503	NM_172217.2	IL16	NP_757366.2	ILMN_1813572	0005080615	A	8025	GCCCAAGGGAAAGAAAAGGAAGGCTCTTCTCCCCAGAGTTCCCCATGCAG	15	+	79391844-79391893	15q25.1b	Homo sapiens interleukin 16 (lymphocyte chemoattractant factor) (IL16), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9144227] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9144227] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ16806; FLJ44234; HsT19289; prIL-16; LCF; IL-16; FLJ42735	FLJ16806; FLJ44234; HsT19289; prIL-16; LCF; IL-16; FLJ42735
Homo sapiens	RefSeq	XR_019514.1	ILMN_167581	LOC391592	XR_019514.1	XR_019514.1		391592	113415325	XR_019514.1	LOC391592		ILMN_3288659	0000780274	M	1675	TTGCGTGATAATATGGCATGCCCAGGGCCCTACTCATCAATGAAAAACCC				3q26.31a	PREDICTED: Homo sapiens misc_RNA (LOC391592), miscRNA.					
Homo sapiens	RefSeq	XM_001713829.1	ILMN_336364	LOC100133420	XM_001713829.1	XM_001713829.1		100133420	169214993	XM_001713829.1	LOC100133420	XP_001713881.1	ILMN_3236704	0006400450	S	1	CTTCCTGCTGGCATATATGATGACTTAGCTTTTTTCCCCGACAGATCGAC					PREDICTED: Homo sapiens hypothetical protein LOC100133420 (LOC100133420), mRNA.					
Homo sapiens	RefSeq	XM_379454.2	ILMN_30911	LOC401284	XM_379454.2	XM_379454.2		401284	88998573	XM_379454.2	LOC401284	XP_379454.2	ILMN_1805911	0003130386	A	3203	GACACATGTGACTCTTCCTTTCACTTGAATGCCGAGAGGCCATGCAGGGT	6	+	166684261-166684310	6q27c	PREDICTED: Homo sapiens hypothetical LOC401284 (LOC401284), mRNA.					
Homo sapiens	RefSeq	Hs.454895	ILMN_175442	LOC728117	XM_001126583.1	XM_001126583.1		728117	113429149	XM_001126583.1	LOC728117	XP_001126583.1	ILMN_1824067	0001710543	S	273	CGTGCTGGTGGGGATTGAGGAGAACACGGGTACAGCTCCACAGCTACCTT	21	-	45878811-45878860	21q22.3e	PREDICTED: Homo sapiens hypothetical protein LOC728117 (LOC728117), mRNA.					
Homo sapiens	RefSeq	NM_022489.1	ILMN_41170	INF2	NM_001031714.3	NM_001031714.3		64423	149999377	NM_001031714.3	INF2	NP_001026884.3	ILMN_1727248	0004920474	A	4386	CTTTGCTGCCACTGCCAGGCCTCTGCCCTGCAGCTGAAACTTGGCCATCA	14	+	104256725-104256774	14q32.33b	Homo sapiens inverted formin, FH2 and WH2 domain containing (INF2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	DKFZp762A0214; C14orf151; FLJ22056; INF2; MGC13251; C14orf173; pp9484	DKFZp762A0214; FLJ22056; pp9484
Homo sapiens	RefSeq	NM_016284.3	ILMN_169268	CNOT1	NM_016284.3	NM_016284.3		23019	42716274	NM_016284.3	CNOT1	NP_057368.3	ILMN_1669206	0006520382	I	8331	GGTCCCTGTGTTGTATTTTGTAGCCTTTTCCTGGGCTTCAGCTCCCCTAC	16	-	58553905-58553954	16q21a	Homo sapiens CCR4-NOT transcription complex, subunit 1 (CNOT1), transcript variant 1, mRNA.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		FLJ90644; DKFZp686O168; NOT1H; FLJ36492; DKFZp686E0722; CDC39; AD-005; NOT1; KIAA1007	FLJ90644; DKFZp686O168; NOT1H; FLJ36492; DKFZp686E0722; CDC39; AD-005; NOT1; KIAA1007
Homo sapiens	RefSeq	NM_006789.2	ILMN_3940	APOBEC2	NM_006789.2	NM_006789.2		10930	42544183	NM_006789.2	APOBEC2	NP_006780.1	ILMN_1719143	0003890743	S	956	TGCTGCTCTCGGGAAGGACGAAAGTGACCTGCAAGGAGAGAAATGCAACC	6	+	41140003-41140052	6p21.1h	Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2 (APOBEC2), mRNA.		Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically [goid 16556] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10403781] [evidence TAS]; Catalysis of the reaction: cytidine + H2O = uridine + NH3 [goid 4126] [pmid 10403781] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ARCD1; ARP1	ARCD1; ARP1
Homo sapiens	RefSeq	NM_006428.3	ILMN_22546	MRPL28	NM_006428.3	NM_006428.3		10573	39812062	NM_006428.3	MRPL28	NP_006419.2	ILMN_1694950	0006760288	S	815	CAGTGACCACACAGCTCCTCCATGCCTGACCAACAGGCCCAGCTTTCCCT	16	-	417630-417674:417675-417679	16p13.3f	Homo sapiens mitochondrial ribosomal protein L28 (MRPL28), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [pmid 11543634] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11543634] [evidence NAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11543634] [evidence NAS]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [pmid 11543634] [evidence NAS]	MGC8499; MAAT1; p15	MGC8499; MAAT1; p15
Homo sapiens	RefSeq	XM_001133153.1	ILMN_166668	LOC730236	XM_001133153.1	XM_001133153.1		730236	113424186	XM_001133153.1	LOC730236	XP_001133153.1	ILMN_3228269	0002060075	A	1268	GGCTCTTGACATACTTAAGCTCTTGACTGAGGGCGTGTTGGAGATTACCC	13	+	66703983-66704032	13q21.32b	PREDICTED: Homo sapiens hypothetical LOC730236 (LOC730236), mRNA.					
Homo sapiens	RefSeq	XM_001719513.1	ILMN_350577	ZNF812	XM_001719513.1	XM_001719513.1		729648	169213767	XM_001719513.1	ZNF812	XP_001719565.1	ILMN_3305614	0003140725	M	1291	CTCACCCCTTAATGTTCACCTGCAAACTCATACCAGAGAGAAAGCCCTCA				19p13.2c	PREDICTED: Homo sapiens zinc finger protein 812 (ZNF812), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_020943.1	ILMN_26371	CWC22	NM_020943.2	NM_020943.2		57703	153792116	NM_020943.2	CWC22	NP_065994.1	ILMN_1674128	0001500021	S	2920	GGTGCCGAGAGACGATGGGAAAAATCTAGCAGATACTCTGAACAATCCAG	2	-	180809913-180809962	2q31.3a	Homo sapiens CWC22 spliceosome-associated protein homolog (S. cerevisiae) (CWC22), mRNA.					
Homo sapiens	RefSeq	NM_020943.2	ILMN_26371	CWC22	NM_020943.2	NM_020943.2		57703	153792116	NM_020943.2	CWC22	NP_065994.1	ILMN_3245616	0007200086	S	2545	CAAGAACACGGGCACCAGGAAACAAGGACTGAGAGAGAAAGAAGGTCAGA	2	-	180810288-180810337	2q31.3a	Homo sapiens CWC22 spliceosome-associated protein homolog (S. cerevisiae) (CWC22), mRNA.					
Homo sapiens	RefSeq	NM_025077.2	ILMN_11173	TOE1	NM_025077.2	NM_025077.2		114034	31543814	NM_025077.2	TOE1	NP_079353.2	ILMN_1660938	0000630673	S	1920	CAGGTTATGTGATGGCCTATGTGGAAGTGAGCCAGGGACCGCAACCCTGC	1	+	45581765-45581814	1p34.1c	Homo sapiens target of EGR1, member 1 (nuclear) (TOE1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ13949	FLJ13949
Homo sapiens	RefSeq	NM_001113541.1	ILMN_343237	FAM75A5	NM_001113541.1	NM_001113541.1		727905	165377333	NM_001113541.1	FAM75A5	NP_001107013.1	ILMN_3246786	0005130326	S	1964	CTCCATGTCCACAGGTGAAGGCAGCAAGGAGGCACAGAAGGTGAAGTTCC	9	+	41504663-41504712	9p12a	Homo sapiens family with sequence similarity 75, member A5 (FAM75A5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_001012979.1	ILMN_183640	TCEAL5	NM_001012979.1	NM_001012979.1		340543	61175238	NM_001012979.1	TCEAL5	NP_001012997.1	ILMN_1749073	0002480471	S	862	AGTGAGGGGCGGAGGTAGGGGCCAGAAAGACTTAGAAGATGTCCCATATG	X	-	102528875-102528924	Xq22.1e	Homo sapiens transcription elongation factor A (SII)-like 5 (TCEAL5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]			
Homo sapiens	RefSeq	Hs.276884	ILMN_163382	LOC730340	XM_001131441.1	XM_001131441.1		730340	113419842	XM_001131441.1	LOC730340	XP_001131441.1	ILMN_1865078	0007150736	S	667	CCAGAGCAGGTAGGCTTGGCTCCCTCTCCAGCCTCTTAAGGCACGAGTTA	7	-	148459323-148459372		PREDICTED: Homo sapiens hypothetical LOC730340 (LOC730340), mRNA.					
Homo sapiens	RefSeq	NM_001001895.1	ILMN_28036	UBASH3A	NM_001001895.1	NM_001001895.1		53347	49640013	NM_001001895.1	UBASH3A	NP_001001895.1	ILMN_2338348	0003830220	A	1935	CAGAGTGGAGAGGCAGAAACCATGTGCAGAGGCTGGGAGATGCTGCTGTT	21	+	42740400-42740449	21q22.3b	Homo sapiens ubiquitin associated and SH3 domain containing, A (UBASH3A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	Any process that modulates the frequency, rate, or extent of production of a cytokine [goid 1817] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence IEA]		TULA; CLIP4; STS-2	TULA; STS-2; CLIP4
Homo sapiens	RefSeq	NM_022006.1	ILMN_26636	FXYD7	NM_022006.1	NM_022006.1		53822	11612658	NM_022006.1	FXYD7	NP_071289.1	ILMN_1786118	0006380110	S	599	ATCCCCGTGTATGGCCCCCCTGCACCTCCTTGTCTCATCCCCGAAGATCC	19	+	35645091-35645140	19q13.12a	Homo sapiens FXYD domain containing ion transport regulator 7 (FXYD7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	FLJ25096	FLJ25096
Homo sapiens	Unigene	Hs.567001	ILMN_119219	HS.567001	Hs.567001		Hs.567001		6697520	AW290884			ILMN_1824029	0002850446	S	232	CCTGCCAGCTGAGTCTGTCTTCTGTTAAAGAGCTTTCCTGGGGGCTCCAC	9	+	100671312-100671361		UI-H-BI2-agd-b-02-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2723667 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003036.1	ILMN_440	SKI	NM_003036.1	NM_003036.1		6497	4506966	NM_003036.1	SKI	NP_003027.1	ILMN_1710598	0002140164	S	3396	CGGGGGTCGTTCTGTGCCTTCCAGCATCTTGTACAGCAAATCCTGACTCG	1	+	2229201-2229250	1p36.33a	Homo sapiens v-ski sarcoma viral oncogene homolog (avian) (SKI), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11121043] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10549282] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14525983] [evidence IPI]	SKV	SKV
Homo sapiens	RefSeq	NM_198455.2	ILMN_309159	SSPO	NM_198455.2	NM_198455.2		23145	134031944	NM_198455.2	SSPO	NP_940857.2	ILMN_3237755	0003870053	S	15483	GATCATGGGACTCAGCAGCACTGACCACGTCCTTCCACGCTCTCTCACCT	7	+	149161871-149161920	7q36.1b	Homo sapiens SCO-spondin homolog (Bos taurus) (SSPO), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]	SCO-spondin; KIAA2036; FLJ45737; FLJ36112	SCO-spondin; KIAA2036; FLJ45737; FLJ36112
Homo sapiens	RefSeq	NM_032854.1	ILMN_16377	CORO6	NM_032854.2	NM_032854.2		84940	109627649	NM_032854.2	CORO6	NP_116243.2	ILMN_1813386	0001940332	S	1964	CTGCAGACACATACACAACCCGTTTGCTGCAGAGCCGGACCCAGTGGCTA	17	-	24966336-24966385	17q11.2b	Homo sapiens coronin 6 (CORO6), mRNA.				FLJ14871	FLJ14871
Homo sapiens	Unigene	Hs.120938	ILMN_75681	HS.120938	Hs.120938		Hs.120938		27828062	BX096048			ILMN_1828161	0007000471	S	495	GGACCTGGGCTGGAAGGACTCAAAGACTGAAGATGAGTTGATGCTAAGGG	10	+	77072738-77072787		BX096048 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998P20514, mRNA sequence					
Homo sapiens	RefSeq	NM_003305.1	ILMN_1898	TRPC3	NM_003305.1	NM_003305.1		7222	4507686	NM_003305.1	TRPC3	NP_003296.1	ILMN_2094377	0002450239	S	2948	CCCAGCATGCTGAGATGTGAATGATGCAGCAACCTGGATTTGGCTTTGAC	4	-	123020308-123020340:123020341-123020357	4q27c	Homo sapiens transient receptor potential cation channel, subfamily C, member 3 (TRPC3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9368034] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 9215637] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [pmid 9215637] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15757897] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15744307] [evidence IPI];  [goid 15279] [pmid 9215637] [evidence TAS]	TRP3	TRP3
Homo sapiens	RefSeq	NM_145036.1	ILMN_25572	CCDC46	NM_001037325.1	NM_001037325.1		201134	82880653	NM_001037325.1	CCDC46	NP_001032402.1	ILMN_1788629	0000160747	S	796	GACTACATATCAAGGCAGAAGGTAACTGCACGAGAGAATGCAACGGATGC	17	-	61062525-61062550:61062551-61062554:61063704-61063723	17q24.1a-q24.2a	Homo sapiens coiled-coil domain containing 46 (CCDC46), transcript variant 2, mRNA.				FLJ39610; MGC33887	FLJ39610
Homo sapiens	RefSeq	NM_003992.1	ILMN_1044	CLK3	NM_003992.1	NM_003992.1		1198	4502884	NM_003992.1	CLK3	NP_003983.1	ILMN_2320336	0004640041	A	1657	AGCCTGCAGGGGAGCAGACTTGGTGCCCAGCTGCCAGAAAGCACAGATTT	15	+	72709406-72709455	15q24.1b	Homo sapiens CDC-like kinase 3 (CLK3), transcript variant phclk3, mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 7990150] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ22858	FLJ22858
Homo sapiens	RefSeq	XM_941441.1	ILMN_42076	LOC652111	XM_941441.1	XM_941441.1		652111	89067180	XM_941441.1	LOC652111	XP_946534.1	ILMN_1692015	0003840187	S	74	GGCTCCAGGCTAACCAAAAGTCTGTTCTGGTTCCTTGGGGTTTCTCCACA					PREDICTED: Homo sapiens similar to Tripartite motif protein 16 (Estrogen-responsive B box protein) (LOC652111), mRNA.					
Homo sapiens	Unigene	Hs.153248	ILMN_79107	HS.153248	Hs.153248		Hs.153248		8167473	AW976247			ILMN_1891233	0005690010	S	416	TCAACGAATAAGTCTCCATTGTCCAGTCATGGCATTCACTCTGCCTGGGG	7	-	39624391-39624440		EST388356 MAGE resequences, MAGN Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_001725215.1	ILMN_341692	LOC100134584	XM_001725215.1	XM_001725215.1		100134584	169170601	XM_001725215.1	LOC100134584	XP_001725267.1	ILMN_3240986	0006770192	S	3626	GTAGCGGGTGTTTTTCCTTGACACTAACGCTACCGCTAGACCACGGTGGG	7	-	101673736-101673785		PREDICTED: Homo sapiens hypothetical protein LOC100134584 (LOC100134584), mRNA.					
Homo sapiens	RefSeq	NM_021963.2	ILMN_25782	NAP1L2	NM_021963.2	NM_021963.2		4674	21614528	NM_021963.2	NAP1L2	NP_068798.1	ILMN_1703684	0005700382	S	1580	CTCAGGTGATGCACTGGAATCTCAGCAGGAGGGGGTAGTTAGAGAAGTTA	X	-	72433055-72433104	Xq13.2a	Homo sapiens nucleosome assembly protein 1-like 2 (NAP1L2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8789438] [evidence TAS]; Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure [goid 5678] [pmid 8789438] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 8789438] [evidence TAS]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		BPX; MGC26243	BPX; MGC26243
Homo sapiens	RefSeq	NM_182692.1	ILMN_30159	SRPK2	NM_182692.1	NM_182692.1		6733	33188448	NM_182692.1	SRPK2	NP_872634.1	ILMN_1695468	0002120731	I	107	CTGGCCATTCAGGCCCGAAAGCGGAGGCCGAAAAGAGAGAAACATCCGAA	7	-	105029097-105029146	7q22.2a	Homo sapiens SFRS protein kinase 2 (SRPK2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9472028] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9472028] [evidence IDA]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9472028] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9472028] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 9472028] [evidence IDA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9472028] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9472028] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9472028] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9472028] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ36101; SFRSK2	FLJ36101; SFRSK2
Homo sapiens	RefSeq	NM_182691.1	ILMN_30159	SRPK2	NM_182692.1	NM_182692.1		6733	33188448	NM_182692.1	SRPK2	NP_872634.1	ILMN_1669215	0002900739	A	3179	GCAGTGGGCAGAATACTTCTCACAGCTCAAAGATAACAGTGATCACATTC	7	-	104757403-104757452	7q22.2a	Homo sapiens SFRS protein kinase 2 (SRPK2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9472028] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9472028] [evidence IDA]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9472028] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9472028] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 9472028] [evidence IDA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9472028] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9472028] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9472028] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9472028] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ36101; SFRSK2	FLJ36101; SFRSK2
Homo sapiens	RefSeq	NM_144563.1	ILMN_23078	RPIA	NM_144563.2	NM_144563.2		22934	94536841	NM_144563.2	RPIA	NP_653164.2	ILMN_1714809	0003400482	S	1598	CTGGGGGTTTCTTCATATTCCTGCTGTTGGAAGCAGTTGACCAGAAATGC	2	+	88831331-88831380	2p11.2c	Homo sapiens ribose 5-phosphate isomerase A (RPIA), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14988808] [evidence EXP]	The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P [goid 9052] [evidence IEA]; The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P [goid 9052] [evidence NAS]	Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate [goid 4751] [evidence IEA]; Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate [goid 4751] [pmid 7758956] [evidence NAS]; Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate [goid 4751] [pmid 14988808] [evidence EXP]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	RPI	RPI
Homo sapiens	RefSeq	NM_002153.1	ILMN_19014	HSD17B2	NM_002153.1	NM_002153.1		3294	4504502	NM_002153.1	HSD17B2	NP_002144.1	ILMN_1808713	0006980458	S	1166	CCCTTTTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCC	16	+	80689377-80689426	16q23.3a	Homo sapiens hydroxysteroid (17-beta) dehydrogenase 2 (HSD17B2), mRNA.	The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 8099587] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 17538076] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + 17-alpha,20-alpha-dihydroxypregn-4-en-3-one = NAD(P)H + H+ + 17-alpha-hydroxyprogesterone [goid 47006] [pmid 17538076] [evidence TAS]; Catalysis of the reaction: testosterone + NAD+ = androst-4-ene-3,17-dione + NADH [goid 50327] [evidence IEA]	HSD17; EDH17B2	HSD17; EDH17B2
Homo sapiens	RefSeq	NM_153335.4	ILMN_17478	STRADA	NM_153335.4	NM_153335.4		92335	51242958	NM_153335.4	STRADA	NP_699166.2	ILMN_1699666	0002100035	I	1682	GTGTCCTGGGACCCAGAGCAACAGGATCTGTCACCCACCTCTCTCTTCTC	17	-	59134849-59134898	17q23.3a-q23.3b	Homo sapiens STE20-related kinase adaptor alpha (STRADA), transcript variant 3, mRNA.				STRAD; FLJ90524; PMSE	STRAD; FLJ90524; PMSE
Homo sapiens	RefSeq	XM_926717.1	ILMN_38462	LOC643386	XM_926717.1	XM_926717.1		643386	89040394	XM_926717.1	LOC643386	XP_931810.1	ILMN_1717880	0005290661	S	295	ATCTGCAGCCAGTGGGCCAAGATGATGCTGTCCTGCGGCACCACCGTGTA	16	-	48649769-48649804:48649924-48649937	16q12.1c	PREDICTED: Homo sapiens similar to actin, alpha 2, smooth muscle, aorta (LOC643386), mRNA.					
Homo sapiens	RefSeq	NM_003919.1	ILMN_306909	SGCE	NM_001099400.1	NM_001099400.1		8910	150378534	NM_001099400.1	SGCE	NP_001092870.1	ILMN_1674620	0005290348	S	1219	GAGATAGCATGGCCCCTGTCAACGCTTCCTGTGTTCCACCCTGTGACTGG	7	-	94228155-94228204	7q21.3b	Homo sapiens sarcoglycan, epsilon (SGCE), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9475163] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [pmid 9475163] [evidence TAS]	The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 9405466] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9405466] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DYT11; ESG	ESG; DYT11
Homo sapiens	RefSeq	NM_182577.1	ILMN_17282	ODF3L2	NM_182577.1	NM_182577.1		284451	32698983	NM_182577.1	ODF3L2	NP_872383.1	ILMN_1787831	0006330639	S	1519	CCCCGAGGCCTGTGCCTTTCCCACTCCACCTTCTACAGTTGCTTAGCCAA	19	-	414381-414430	19p13.3j	Homo sapiens outer dense fiber of sperm tails 3-like 2 (ODF3L2), mRNA.				MGC129962; MGC129963; FLJ40059	MGC129962; MGC129963; FLJ40059
Homo sapiens	RefSeq	NM_015974.1	ILMN_17181	CRYL1	NM_015974.2	NM_015974.2		51084	115430218	NM_015974.2	CRYL1	NP_057058.2	ILMN_1714397	0003940458	S	1169	CCTGAGTGGGGTGGTGCAGGCCGGTAGTCTGCCCGTCACTTTGGATCATA	13	-	20978088-20978137	13q12.11b	Homo sapiens crystallin, lambda 1 (CRYL1), mRNA.		The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC149526; MGC149525; GDH; lambda-CRY	
Homo sapiens	RefSeq	NM_003819.2	ILMN_18446	PABPC4	NM_003819.2	NM_003819.2		8761	6552335	NM_003819.2	PABPC4	NP_003810.1	ILMN_1757343	0005310278	S	2598	CTGCTGCACATGTTAGAGTCCCCCGAGTCTCTCCGCTCCAAGGTGGATGA	1	-	39800037-39800046:39800332-39800371	1p34.2d	Homo sapiens poly(A) binding protein, cytoplasmic 4 (inducible form) (PABPC4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8524242] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8524242] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 6401] [pmid 8524242] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 8524242] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 9030741] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11369516] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [pmid 8524242] [evidence IDA]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [pmid 8524242] [evidence IDA]; Interacting selectively with a sequence of cytosine residues in an RNA molecule [goid 17130] [pmid 8524242] [evidence IDA]	APP-1; APP1; PABP4; iPABP	PABP4; iPABP; APP-1; APP1
Homo sapiens	RefSeq	NM_014066.3	ILMN_168009	COMMD5	NM_014066.3	NM_014066.3		28991	124487370	NM_014066.3	COMMD5	NP_054785.2	ILMN_2300396	0000020707	A	982	ATTCAGATCCGGCTTGGACAGGCACCTGAGATGGTGCCAAAGTGCAGCTG	8	-	146075978-146076027	8q24.3h	Homo sapiens COMM domain containing 5 (COMMD5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15799966] [evidence IPI]	FLJ13008; HT002; HCARG; MGC72046	HT002; HCARG; MGC72046; FLJ13008
Homo sapiens	RefSeq	NM_014066.3	ILMN_168009	COMMD5	NM_014066.3	NM_014066.3		28991	124487370	NM_014066.3	COMMD5	NP_054785.2	ILMN_2235454	0003190484	I	137	AGCTGGGGGTGTGGGCCTAGGAAAGGCTGCTTCGCCGCTGTGTTCGGAGA	8	-	146078266-146078315	8q24.3h	Homo sapiens COMM domain containing 5 (COMMD5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15799966] [evidence IPI]	FLJ13008; HT002; HCARG; MGC72046	HT002; HCARG; MGC72046; FLJ13008
Homo sapiens	RefSeq	XR_038398.1	ILMN_341082	LOC100129712	XR_038398.1	XR_038398.1		100129712	169172762	XR_038398.1	LOC100129712		ILMN_3260133	0004810113	M	432	ACAGCAACAGGAATGCAAGGGCAGAAAGAAGTCAAGAGACTGCAAAGGCC	8	-	6958324-6958373	8p23.1f	PREDICTED: Homo sapiens misc_RNA (LOC100129712), miscRNA.					
Homo sapiens	RefSeq	NM_020234.3	ILMN_3248	DTWD1	NM_020234.3	NM_020234.3		56986	34222368	NM_020234.3	DTWD1	NP_064619.2	ILMN_2207816	0000150128	S	765	AACAAGAGTTCTGTGATTTGAATGACAGCAAGTGCAAAGGCACAACACTG	15	+	47714161-47714210	15q21.2a	Homo sapiens DTW domain containing 1 (DTWD1), mRNA.				MGC111207; MDS009	MGC111207; MDS009
Homo sapiens	RefSeq	NM_172376.1	ILMN_22718	KCNH5	NM_172376.1	NM_172376.1		27133	27886647	NM_172376.1	KCNH5	NP_758964.1	ILMN_1700199	0001340397	I	2042	GAAGGGTGACCTGCTGGGTGTGAAACTGCTGCACGACTTCCTACTTCACC	14	-	63179356-63179404:63179405-63179405	14q23.2a-q23.2b	Homo sapiens potassium voltage-gated channel, subfamily H (eag-related), member 5 (KCNH5), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	EAG2; H-EAG2; Kv10.2	EAG2; H-EAG2; Kv10.2
Homo sapiens	RefSeq	NM_001012424.1	ILMN_19856	YAF2	NM_005748.3	NM_005748.3		10138	60218896	NM_005748.3	YAF2	NP_005739.2	ILMN_1765606	0004590593	A	4013	AGGCCCTCATCAGATGGGCTCCCTGATCTTGGACTCCTCAGCCTTTGGAC	12	-	42550939-42550988	12q12e	Homo sapiens YY1 associated factor 2 (YAF2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11593398] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12706874] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 11593398] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 11593398] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 12706874] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11593398] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9016636] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12706874] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC41856	MGC41856
Homo sapiens	RefSeq	NM_005748.3	ILMN_19856	YAF2	NM_005748.3	NM_005748.3		10138	60218896	NM_005748.3	YAF2	NP_005739.2	ILMN_2363805	0003830059	A	3253	TACTTTGCTATAAGTAAGAGTGAAGATAGGCCGGGTGTGATGGCTCATGC	12	-	42551699-42551748	12q12e	Homo sapiens YY1 associated factor 2 (YAF2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11593398] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12706874] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 11593398] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 11593398] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 12706874] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11593398] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9016636] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12706874] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC41856	MGC41856
Homo sapiens	RefSeq	NM_001978.1	ILMN_29773	EPB49	NM_001978.1	NM_001978.1		2039	4503580	NM_001978.1	EPB49	NP_001969.1	ILMN_1671686	0004610670	S	2526	TGCTTTCCTCACCTGCCCCTGCCCTACCTTACACCCCCAGCTTGACTTCT	8	+	21995783-21995832	8p21.3a	Homo sapiens erythrocyte membrane protein band 4.9 (dematin) (EPB49), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 8341682] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 7615546] [evidence TAS]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [pmid 7615546] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	DMT; DEMATIN	DMT; DEMATIN
Homo sapiens	RefSeq	NM_176085.1	ILMN_18401	TRDMT1	NM_176083.2	NM_176083.2		1787	109637751	NM_176083.2	TRDMT1	NP_788271.1	ILMN_1688104	0002000603	A	2696	GGATGGGGAGGATGGTTGCACAACAGTGTGAGTGTACTTAATGCCACTGC	10	-	17229563-17229612	10p13a	Homo sapiens tRNA aspartic acid methyltransferase 1 (TRDMT1), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 9425235] [evidence TAS]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine [goid 16428] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	M.HsaIIP; RNMT1; PuMet; DNMT2	PuMet; M.HsaIIP
Homo sapiens	RefSeq	NM_176083.2	ILMN_18401	TRDMT1	NM_176083.2	NM_176083.2		1787	109637751	NM_176083.2	TRDMT1	NP_788271.1	ILMN_2404112	0006840121	A	7078	CTGCCACTTCTTCCATGCCCAGAGGAACAGCCAAAGTTACTCAAGTCTGG	10	-	17225181-17225230	10p13a	Homo sapiens tRNA aspartic acid methyltransferase 1 (TRDMT1), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 9425235] [evidence TAS]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine [goid 16428] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	M.HsaIIP; RNMT1; PuMet; DNMT2	RNMT1; PuMet; M.HsaIIP; DNMT2
Homo sapiens	RefSeq	NM_152449.2	ILMN_27522	LYSMD4	NM_152449.2	NM_152449.2		145748	40288200	NM_152449.2	LYSMD4	NP_689662.2	ILMN_1769658	0004920397	S	2346	AGAGCCTGCTACTACTTGGGAGTTGGTGCTGCCCTGTGGCATGGAGGGGT	15	-	100268099-100268148	15q26.3b	Homo sapiens LysM, putative peptidoglycan-binding, domain containing 4 (LYSMD4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		MGC99501; FLJ33008	MGC99501; FLJ33008
Homo sapiens	RefSeq	NM_152449.2	ILMN_27522	LYSMD4	NM_152449.2	NM_152449.2		145748	40288200	NM_152449.2	LYSMD4	NP_689662.2	ILMN_2159859	0007210487	S	2742	GGGCCACAGGTTCCTCTAACATCTGTCACTGTCACTTCACCAGGCAGGCC	15	-	100267703-100267752	15q26.3b	Homo sapiens LysM, putative peptidoglycan-binding, domain containing 4 (LYSMD4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		MGC99501; FLJ33008	MGC99501; FLJ33008
Homo sapiens	RefSeq	NM_004929.2	ILMN_13367	CALB1	NM_004929.2	NM_004929.2		793	5579451	NM_004929.2	CALB1	NP_004920.1	ILMN_1760199	0004640240	S	2202	TAGATTTCTTTGATTGTGAAACAGGGAGCTATGAGAGATGTGTCCATGTG	8	-	91140293-91140342	8q21.3d	Homo sapiens calbindin 1, 28kDa (CALB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]	Interacting selectively with vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 5499] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 3691519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 3691519] [evidence TAS]	CALB	CALB
Homo sapiens	RefSeq	XM_933652.1	ILMN_43465	LOC653750	XM_933652.1	XM_933652.1		653750	88943556	XM_933652.1	LOC653750	XP_938745.1	ILMN_1748175	0004890288	S	185	TTTCCGGCCCCGTTTGCGACGATGTGCTCGAGAAGACTGAGGGAAGAGTG	1	+	158498926-158498975		PREDICTED: Homo sapiens similar to WD repeat domain 42A (LOC653750), mRNA.					
Homo sapiens	RefSeq	NM_182918.2	ILMN_5934	ERG	NM_182918.2	NM_182918.2		2078	46255022	NM_182918.2	ERG	NP_891548.1	ILMN_1727426	0006110601	A	3005	GTCCAGGAACTTGTGCAAGGGAGAGCCAAGGAAATAGGATGTTTGGCACC	21	-	38675673-38675722	21q22.2a	Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog (avian) (ERG), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8502479] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8502479] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8502479] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8502479] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 3476934] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8502479] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11791185] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	erg-3; p55	erg-3; p55
Homo sapiens	RefSeq	NM_182918.2	ILMN_5934	ERG	NM_182918.2	NM_182918.2		2078	46255022	NM_182918.2	ERG	NP_891548.1	ILMN_1785486	0002370347	I	786	CCCAAATACTTCAGTATATCCTGAAGCTACGCAAAGAATTACAACTAGGC	21	-	38694368-38694417	21q22.2a	Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog (avian) (ERG), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8502479] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8502479] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8502479] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8502479] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 3476934] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8502479] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11791185] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	erg-3; p55	erg-3; p55
Homo sapiens	RefSeq	NM_006546.3	ILMN_181275	IGF2BP1	NM_006546.3	NM_006546.3		10642	56237026	NM_006546.3	IGF2BP1	NP_006537.3	ILMN_1733807	0001050670	S	8583	CCTCCCATCCTTTAATCTGTTCATTGCTTTGGGGGAGGTGGGGCAGCTGG	17	+	44488320-44488369	17q21.32c	Homo sapiens insulin-like growth factor 2 mRNA binding protein 1 (IGF2BP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [pmid 9891060] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [pmid 9891060] [evidence IC ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [pmid 9891060] [evidence IDA]; Interacting selectively with the 5' untranslated region of an mRNA molecule [goid 48027] [pmid 9891060] [evidence IDA]	CRD-BP; VICKZ1; IMP-1; CRDBP; IMP1; ZBP1	CRD-BP; VICKZ1; IMP-1; CRDBP; IMP1; ZBP1
Homo sapiens	RefSeq	NM_183353.1	ILMN_2911	RNF12	NM_183353.1	NM_183353.1		51132	34452685	NM_183353.1	RNF12	NP_899196.1	ILMN_2335109	0001470402	A	3182	TCCTGAAGACAGTAATAATGCAGACACAAACTGGTTTCATATGGTGAGAG	X	-	73726913-73726962	Xq13.2c	Homo sapiens ring finger protein 12 (RNF12), transcript variant 2, mRNA.	A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [pmid 11013082] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11013082] [evidence NAS]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 11013082] [evidence NAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC15161; NY-REN-43; RLIM	MGC15161; NY-REN-43; RLIM
Homo sapiens	RefSeq	NM_183353.1	ILMN_2911	RNF12	NM_183353.1	NM_183353.1		51132	34452685	NM_183353.1	RNF12	NP_899196.1	ILMN_2254182	0001430333	I	194	GAAGAAAACTAAAATCCAGTTTATTGTATTTCAATACTATGTCATAACAG	X	-	73749145-73749194	Xq13.2c	Homo sapiens ring finger protein 12 (RNF12), transcript variant 2, mRNA.	A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [pmid 11013082] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11013082] [evidence NAS]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 11013082] [evidence NAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC15161; NY-REN-43; RLIM	MGC15161; NY-REN-43; RLIM
Homo sapiens	RefSeq	NM_032131.3	ILMN_179546	ARMC2	NM_032131.3	NM_032131.3		84071	34222278	NM_032131.3	ARMC2	NP_115507.3	ILMN_2213008	0001710152	S	3148	AGAAAGAAGGGTAGGCAACATGAGTGGAACACGTTACAACATAGGATCTG	6	+	109401786-109401835	6q21e-q21f	Homo sapiens armadillo repeat containing 2 (ARMC2), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	bA787I22.1; RP11-787I22.1; DKFZP434P0714	bA787I22.1; RP11-787I22.1; DKFZP434P0714
Homo sapiens	RefSeq	XM_939504.1	ILMN_42342	LOC650418	XM_939504.1	XM_939504.1		650418	89040971	XM_939504.1	LOC650418	XP_944597.1	ILMN_1723584	0007050296	S	105	AGGAGACATGAACCTTGAAGACCAGGAGTGTAGTGACCAGCCATCAGAAG					PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC650418), mRNA.					
Homo sapiens	RefSeq	XM_001723851.1	ILMN_336412	DKFZP667F0711	XM_001723851.1	XM_001723851.1		399716	169194623	XM_001723851.1	DKFZp667F0711	XP_001723903.1	ILMN_3178253	0000650440	A	639	CTGAGGTCATGGCAAAAGGGCCCAGGCTTCTACTGGCCAACAATGAGACA				10p15.1a	PREDICTED: Homo sapiens hypothetical protein DKFZp667F0711 (DKFZp667F0711), mRNA.					
Homo sapiens	RefSeq	XM_001726007.1	ILMN_344420	LOC100129905	XM_001726007.1	XM_001726007.1		100129905	169203606	XM_001726007.1	LOC100129905	XP_001726059.1	ILMN_3187403	0001470639	A	322	GGTCTTCCAAACCTTTGTATGAGCCCATTAGCTGCCTCAGCTTTCCCTCA				11q23.3b	PREDICTED: Homo sapiens similar to hCG2027326 (LOC100129905), mRNA.					
Homo sapiens	RefSeq	XM_001726007.1	ILMN_344420	LOC100129905	XM_001726007.1	XM_001726007.1		100129905	169203606	XM_001726007.1	LOC100129905	XP_001726059.1	ILMN_3263864	0001510619	M	494	GGGAGGCTGAGATGAAAGGATTGCTTGAAGCCAGGAGTTGCAAGACAAGC				11q23.3b	PREDICTED: Homo sapiens similar to hCG2027326 (LOC100129905), mRNA.					
Homo sapiens	RefSeq	NM_001395.1	ILMN_15543	DUSP9	NM_001395.1	NM_001395.1		1852	4503420	NM_001395.1	DUSP9	NP_001386.1	ILMN_1712314	0001660050	S	1771	CCTAGGAGCTACTGGGCAGGTTCCCGGCCACACATCTGGTGGGCTGTTTT	X	+	152569457-152569506	Xq28f	Homo sapiens dual specificity phosphatase 9 (DUSP9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9030581] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9030581] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [pmid 9030581] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9030581] [evidence TAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 9030581] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	MKP4; MKP-4	MKP4; MKP-4
Homo sapiens	RefSeq	NM_207290.1	ILMN_23093	AAA1	NM_207290.1	NM_207290.1		404744	46402503	NM_207290.1	AAA1	NP_997173.1	ILMN_1659452	0002750273	A	216	CGCAGGGAGACAGTTCAGTCACTGCAATCTTCATGCCCATCAGTTTCTTG	7	-	34734887-34734936	7p14.3a	Homo sapiens AAA1 protein (AAA1), transcript variant VIII, mRNA.					
Homo sapiens	RefSeq	NM_001077427.2	ILMN_166509	LYPD1	NM_001077427.2	NM_001077427.2		116372	126273574	NM_001077427.2	LYPD1	NP_001070895.1	ILMN_2388397	0006290341	A	360	CCAGCTGAACAACGACTGCTCCTCCCCCGAGTTCATTGTGAATTGCACGG	2	-	133426020-133426069	2q21.2b	Homo sapiens LY6/PLAUR domain containing 1 (LYPD1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			MGC29643; PHTS; FLJ41033; LYPDC1	MGC29643; PHTS; FLJ41033; LYPDC1
Homo sapiens	RefSeq	NM_004268.3	ILMN_17489	CRSP6	NM_004268.3	NM_004268.3		9440	28558974	NM_004268.3	CRSP6	NP_004259.3	ILMN_1730329	0002850349	S	3042	AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTC	11	+	93185732-93185781	11q21a	Homo sapiens cofactor required for Sp1 transcriptional activation, subunit 6, 77kDa (CRSP6), mRNA.				DRIP80; MED17; TRAP80; CRSP77; FLJ10812	MED17; CRSP77; FLJ10812; DRIP80; TRAP80
Homo sapiens	RefSeq	XM_928573.1	ILMN_307801	TCHH	NM_007113.2	NM_007113.2		7062	148746194	NM_007113.2	TCHH	NP_009044.2	ILMN_1681248	0005080008	A	6691	CTGTCTTACTCTAGGGCCAATAAGAGATCACATAGAGCATGTTGGGGGTG	1	-	152078952-152079001	1q21.3b	Homo sapiens trichohyalin (TCHH), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 7686953] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 7685034] [evidence TAS]	MGC157889; THL; MGC157890; THH	
Homo sapiens	RefSeq	NM_001118887.1	ILMN_357179	ANGPT2	NM_001118887.1	NM_001118887.1		285	169646748	NM_001118887.1	ANGPT2	NP_001112359.1	ILMN_3250879	0003360398	M	5143	GACACAGCAAAAAGTGATACACTCCGCAGATCTGAAATAGATGTGTTCTC	8	-	6357246-6357295	8p23.1f	Homo sapiens angiopoietin 2 (ANGPT2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10766762] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10766762] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9204896] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 10766762] [evidence TAS]		
Homo sapiens	RefSeq	XM_001718570.1	ILMN_344532	LOC284648	XM_001718570.1	XM_001718570.1		284648	169162421	XM_001718570.1	LOC284648	XP_001718622.1	ILMN_3286751	0001990706	M	1719	GAGGGGGAGGGCTTGGTGGGGAGGGGGACTTACAATTCATCCACGCTGTT				1q25.3c	PREDICTED: Homo sapiens hypothetical protein LOC284648 (LOC284648), mRNA.					
Homo sapiens	RefSeq	XM_931999.1	ILMN_33967	LOC643035	XM_931999.1	XM_931999.1		643035	88943746	XM_931999.1	LOC643035	XP_937092.1	ILMN_1720180	0001770075	I	276	AGGCTAAGGCAGAGCTGGGGCCACAGGCACAAGCCAGGCAGCATCCTTTG	1	-	212847032-212847081		PREDICTED: Homo sapiens similar to CG33096-PB, isoform B, transcript variant 3 (LOC643035), mRNA.					
Homo sapiens	RefSeq	NM_183005.1	ILMN_307454	RPP38	NM_001097590.1	NM_001097590.1		10557	148222744	NM_001097590.1	RPP38	NP_001091059.1	ILMN_1680386	0001190075	A	839	CCCCCGGCTCAGTGAGAGAATCGCCCCCGTCATTGGCTTAAAATGTGTTC	10	+	15145796-15145845	10p13c	Homo sapiens ribonuclease P/MRP 38kDa subunit (RPP38), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9630247] [evidence TAS]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [pmid 9630247] [evidence TAS]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [pmid 9630247] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15096576] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP11-455B2.5	RP11-455B2.5
Homo sapiens	RefSeq	XM_001723352.1	ILMN_338020	LOC100128901	XM_001723352.1	XM_001723352.1		100128901	169168431	XM_001723352.1	LOC100128901	XP_001723404.1	ILMN_3179994	0004540019	A	409	TCTTCAGACATGTGCCAGCCTCTCTGGCAAAGCGGTGATGGAAGGGCAGG				5q35.3a	PREDICTED: Homo sapiens hypothetical protein LOC100128901 (LOC100128901), mRNA.					
Homo sapiens	RefSeq	NM_053041.1	ILMN_306788	COMMD7	NM_001099339.1	NM_001099339.1		149951	151101366	NM_001099339.1	COMMD7	NP_001092809.1	ILMN_1810334	0007050576	S	1649	CAGAGCCCCCACGGATTTCTGCACACTCTGGGTCTGTGCTGGTGGAACAT	20	-	31290702-31290751	20q11.21c	Homo sapiens COMM domain containing 7 (COMMD7), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15799966] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [pmid 15799966] [evidence IDA]; A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [pmid 15799966] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15799966] [evidence IPI]; Interacting selectively with NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters [goid 51059] [pmid 15799966] [evidence IDA]	FLJ14987; C20orf92; MGC33315; dJ1085F17.3	FLJ14987; C20orf92; MGC33315; dJ1085F17.3
Homo sapiens	RefSeq	NM_001101800.1	ILMN_343092	FAM13B	NM_001101800.1	NM_001101800.1		51306	156142189	NM_001101800.1	FAM13B	NP_001095270.1	ILMN_3258795	0003520324	M	5384	TGTCCACCAGTATAATGGCATTGCTGTGTCTGGCACTTCATTGTACAGAC	5	-	137303290-137303339	5q31.2c	Homo sapiens family with sequence similarity 13, member B (FAM13B), transcript variant 2, mRNA.				KHCHP; MGC57159; FLJ26735; DKFZp667F249; N61	KHCHP; MGC57159; FLJ26735; DKFZp667F249; N61
Homo sapiens	RefSeq	NM_022772.2	ILMN_6415	EPS8L2	NM_022772.2	NM_022772.2		64787	21264615	NM_022772.2	EPS8L2	NP_073609.2	ILMN_1780827	0005270603	I	125	CGAGGCGCGAACAGACGGACGCACCGGCGAGCGCCGAGGGGACAGGCCGA	11	+	696244-696288:699330-699334	11p15.5d-p15.5c	Homo sapiens EPS8-like 2 (EPS8L2), mRNA. XM_943956 XM_943960 XM_943963 XM_943966	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			FLJ16738; EPS8R2; FLJ21935; MGC3088; FLJ22171; MGC126530	FLJ16738; EPS8R2; FLJ21935; MGC3088; FLJ22171; MGC126530
Homo sapiens	RefSeq	NM_001009814.1	ILMN_16676	KIAA0564	NM_001009814.1	NM_001009814.1		23078	57863272	NM_001009814.1	KIAA0564	NP_001009814.1	ILMN_2339006	0004850414	A	3138	ACGGGATACCTATCGGAGCAAAGCCTACCAGTGTGCAGCTGGCAAAGGAG	13	-	42293725-42293774	13q14.11b-q14.11c	Homo sapiens KIAA0564 (KIAA0564), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	FLJ21779	FLJ21779
Homo sapiens	RefSeq	NM_024745.2	ILMN_166259	SHCBP1	NM_024745.3	NM_024745.3		79801	142376070	NM_024745.3	SHCBP1	NP_079021.2	ILMN_1709162	0000990025	S	2582	GCAGTCGTCAAAACAGCGATAGACAGCATAGGAGGTTTGAAGCAGAAATG	16	-	45172542-45172591	16q11.2i	Homo sapiens SHC SH2-domain binding protein 1 (SHCBP1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [evidence IEA]	MGC26900; FLJ22009; PAL	FLJ22009; MGC26900
Homo sapiens	RefSeq	XM_944549.1	ILMN_31124	LOC651212	XM_944549.1	XM_944549.1		651212	89061908	XM_944549.1	LOC651212	XP_949642.1	ILMN_1763673	0005690195	S	640	AGGGGGCTGGCAGGAGCCCTGGGCAGGGCGGGGTACATGCCATTTTCCTA					PREDICTED: Homo sapiens hypothetical LOC651212 (LOC651212), mRNA.					
Homo sapiens	RefSeq	XM_939717.1	ILMN_44994	LOC650628	XM_939717.1	XM_939717.1		650628	88968893	XM_939717.1	LOC650628	XP_944810.1	ILMN_1655334	0005550520	S	358	TTTCAGGGCGCCCTTGGCGCCGAGGGCCGGGGGAAAGAAGAGAGAGACGA					PREDICTED: Homo sapiens hypothetical protein LOC650628 (LOC650628), mRNA.					
Homo sapiens	RefSeq	NM_198687.1	ILMN_23376	KRTAP10-4	NM_198687.1	NM_198687.1		386672	38490567	NM_198687.1	KRTAP10-4	NP_941960.1	ILMN_1762711	0005390072	S	1333	TCCCACCTGAAAGCTGATAGTCGCGTCCTGAATTGCTCCTGCACTTTGAC	21	+	44819366-44819415	21q22.3d	Homo sapiens keratin associated protein 10-4 (KRTAP10-4), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			MGC149546; KRTAP18.4; KRTAP10.4; MGC149545; KAP10.4; KRTAP18-4; KAP18-4	MGC149546; KRTAP18.4; KRTAP10.4; MGC149545; KAP10.4; KRTAP18-4; KAP18-4
Homo sapiens	RefSeq	NM_194435.1	ILMN_16910	VIP	NM_194435.1	NM_194435.1		7432	37588852	NM_194435.1	VIP	NP_919416.1	ILMN_1794638	0000360379	A	1333	AGGAGAACGACCCCTGCTTCTGACACTGAAACTTCCCTTTCTGCTTGTGT	6	+	153080652-153080701	6q25.2a	Homo sapiens vasoactive intestinal peptide (VIP), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10096039] [evidence TAS]; The regulated release of a fluid by a cell or group of cells in a multicellular organism [goid 7589] [pmid 4035357] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8389448] [evidence TAS]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 10096039] [evidence TAS]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	MGC13587; PHM27	MGC13587; PHM27
Homo sapiens	RefSeq	NM_182628.1	ILMN_180136	CCDC37	NM_182628.1	NM_182628.1		348807	32699065	NM_182628.1	CCDC37	NP_872434.1	ILMN_1770493	0007570682	S	1828	AGGACACTGGTATGCCGCTCACGACCCCCAGCCCACAGGATCAAACAACA	3	+	127637830-127637879	3q21.2c	Homo sapiens coiled-coil domain containing 37 (CCDC37), mRNA.				MGC120558; FLJ40083	MGC120558; FLJ40083
Homo sapiens	RefSeq	NM_178823.2	ILMN_11864	C6ORF165	NM_001031743.1	NM_001031743.1		154313	72534779	NM_001031743.1	C6orf165	NP_001026913.1	ILMN_1771746	0004180333	A	1341	CGGGGATTTTGTGCTTACACGTTTGCTGCAACAGATGGTCTTCTCCTTCC	6	+	88140840-88140889	6q15a	Homo sapiens chromosome 6 open reading frame 165 (C6orf165), transcript variant 1, mRNA.				FLJ25974; dJ382I10.1	FLJ25974; dJ382I10.1
Homo sapiens	RefSeq	NM_001031743.1	ILMN_11864	C6ORF165	NM_001031743.1	NM_001031743.1		154313	72534779	NM_001031743.1	C6orf165	NP_001026913.1	ILMN_1757837	0002760386	I	1859	GGTGCCCAGGCCTCAGATTTACTTGGCTGGTCTTCGTGGAGGAAAGAGCG	6	+	88173866-88173915	6q15a	Homo sapiens chromosome 6 open reading frame 165 (C6orf165), transcript variant 1, mRNA.				FLJ25974; dJ382I10.1	FLJ25974; dJ382I10.1
Homo sapiens	RefSeq	NM_197956.3	ILMN_371451	NAIF1	NM_197956.3	NM_197956.3		203245	215422409	NM_197956.3	NAIF1	NP_931045.1	ILMN_3245620	0003850594	S	3057	CTCTGTGGAGGCATTCGTGCAGTGCCAGCTAAAAGGGAGGTGAAGGGGGA	9	-	130823803-130823852	9q34.11a	Homo sapiens nuclear apoptosis inducing factor 1 (NAIF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16378748] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 16378748] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	XM_932723.1	ILMN_309021	ZNF594	NM_032530.1	NM_032530.1		84622	150378519	NM_032530.1	ZNF594	NP_115919.1	ILMN_1726199	0000620292	A	4587	GCTTCTGACTGGCACCATGTAGGCAGACCTAGGTACTAAAATTCCAGCCC	17	-	5083071-5083120	17p13.2b	Homo sapiens zinc finger protein 594 (ZNF594), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp667J055	
Homo sapiens	RefSeq	XM_930090.1	ILMN_36651	LOC647079	XM_930090.1	XM_930090.1		647079	88953719	XM_930090.1	LOC647079	XP_935183.1	ILMN_1682565	0005720717	S	946	GGACCAGCAGGTGCCAGCTTCATCAGGAACGTCTGACCTCCAAACGCTGT	2	+	149351173-149351191:149351322-149351352		PREDICTED: Homo sapiens similar to Kinesin heavy chain isoform 5C (Kinesin heavy chain neuron-specific 2) (LOC647079), mRNA.					
Homo sapiens	RefSeq	NM_001100.3	ILMN_28051	ACTA1	NM_001100.3	NM_001100.3		58	47078293	NM_001100.3	ACTA1	NP_001091.1	ILMN_2125869	0005080132	S	1305	GCTCCAGCCACCCCGCAGTCACTTTCTTTGTAACAACTTCCGTTGCTGCC	1	-	229567130-229567179	1q42.13e	Homo sapiens actin, alpha 1, skeletal muscle (ACTA1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [pmid 15198992] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils [goid 5865] [pmid 15198992] [evidence IDA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [pmid 12849983] [evidence IDA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 10508519] [evidence TAS]; Formation of the actin-based thin filaments of myofibrils [goid 30240] [pmid 11333380] [evidence IMP]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 10508519] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12849983] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10508519] [evidence TAS]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [pmid 10508519] [evidence TAS]; Interacting selectively with ADP, adenosine 5'-diphosphate [goid 43531] [pmid 10508519] [evidence TAS]	MPFD; ASMA; NEM1; CFTDM; ACTA; CFTD; NEM2; CFTD1; NEM3	MPFD; ASMA; NEM1; CFTDM; ACTA; CFTD; NEM2; CFTD1; NEM3
Homo sapiens	RefSeq	NM_144589.2	ILMN_21332	COMTD1	NM_144589.2	NM_144589.2		118881	31542746	NM_144589.2	COMTD1	NP_653190.2	ILMN_1736752	0006960377	S	746	AACCTCCGAAAGGGGACGTGGCGGCCGAGTGTGTGCGAAACCTAAACGAA	10	-	76993908-76993957	10q22.2c	Homo sapiens catechol-O-methyltransferase domain containing 1 (COMTD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule [goid 8171] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ23841	FLJ23841
Homo sapiens	RefSeq	XM_929124.1	ILMN_31348	LOC646162	XM_929124.1	XM_929124.1		646162	89061221	XM_929124.1	LOC646162	XP_934217.1	ILMN_1813297	0000110598	S	1	ATGGTCAGCAATTTGCTTTTTCTGATGAGATCCTGCTCATTCCTTCCTCA	Y	+	2546623-2546657:2546722-2546736		PREDICTED: Homo sapiens similar to hypothetical gene supported by AK125149 (LOC646162), mRNA.					
Homo sapiens	RefSeq	XM_937856.1	ILMN_44262	LOC648775	XM_937856.1	XM_937856.1		648775	88987645	XM_937856.1	LOC648775	XP_942949.1	ILMN_1669552	0001410390	S	121	AGTGCCACTGGGAGTGTGTACACACCAAGTTGGGTAGTGACAACACCTGG					PREDICTED: Homo sapiens hypothetical protein LOC648775 (LOC648775), mRNA.					
Homo sapiens	RefSeq	NM_017420.2	ILMN_21913	SIX4	NM_017420.3	NM_017420.3		51804	142976637	NM_017420.3	SIX4	NP_059116.3	ILMN_1743402	0000020653	S	6002	ACAGAGTCTTTACTGCACTGTTAGGTGATGGCACACAGAGCATGTCCCAG	14	-	61176419-61176468	14q23.1c	Homo sapiens SIX homeobox 4 (SIX4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48704] [evidence IEA]; The orderly movement of myoblasts from one site to another, often during the development of a multicellular organism. A myoblast is a cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51451] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC119452; MGC119453; MGC119450; AREC3	MGC119452; MGC119453; AREC3
Homo sapiens	RefSeq	XM_939210.1	ILMN_39314	LOC650122	XM_939210.1	XM_939210.1		650122	89034924	XM_939210.1	LOC650122	XP_944303.1	ILMN_1685422	0003520747	S	116	AAGAGGCGACCCGCAAAGCAGAGTCTAAGGAACGATGCGGCCACGAGAGT					PREDICTED: Homo sapiens similar to choline kinase alpha isoform a (LOC650122), mRNA.					
Homo sapiens	RefSeq	NM_182907.1	ILMN_20596	PRDM1	NM_182907.1	NM_182907.1		639	33946273	NM_182907.1	PRDM1	NP_878911.1	ILMN_2294784	0000450379	I	29	GCAGTAGCAAAAGTAGTACTCTGTGGTGGGTTAATCGGTTTGAGGCAGCT	6	+	106546843-106546892	6q21c	Homo sapiens PR domain containing 1, with ZNF domain (PRDM1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 1851123] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IEA]; Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1893] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1851123] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC118922; BLIMP1; PRDI-BF1; MGC118925; MGC118924; MGC118923	MGC118922; BLIMP1; PRDI-BF1; MGC118925; MGC118924; MGC118923
Homo sapiens	RefSeq	NM_015602.2	ILMN_18904	TOR1AIP1	NM_015602.2	NM_015602.2		26092	39753956	NM_015602.2	TOR1AIP1	NP_056417.2	ILMN_1729318	0000020403	S	3139	TCCGCGCATCCACTTGTTGCAGTCCAAGTCCTCTAGTGCAACGCCATAGC	1	+	178155166-178155215	1q25.2c	Homo sapiens torsin A interacting protein 1 (TOR1AIP1), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC3413; LAP1B; DKFZP586G011; RP11-533E19.1; FLJ13142	MGC3413; DKFZP586G011; RP11-533E19.1; FLJ13142; LAP1B
Homo sapiens	Unigene	Hs.333045	ILMN_86378	HS.333045	Hs.333045		Hs.333045		2905435	AA832336			ILMN_1854620	0003930131	S	279	TTCAGGATCTCTAGTGCTGGGGTAAGATACGCCGGGAGGGGAAACATCAC					oc98f09.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:1357769 3, mRNA sequence					
Homo sapiens	RefSeq	XM_941044.1	ILMN_45807	LOC651807	XM_941044.1	XM_941044.1		651807	89062178	XM_941044.1	LOC651807	XP_946137.1	ILMN_1765895	0000520220	S	42	GTGGGAACACGAGAAGATGCAGGAGCAGGAGATCAGGAGCAGAAGATTTC					PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC651807), mRNA.					
Homo sapiens	RefSeq	NM_006893.2	ILMN_4831	LGTN	NM_006893.2	NM_006893.2		1939	56699484	NM_006893.2	LGTN	NP_008824.2	ILMN_1712487	0005340414	S	1845	GTGCAGATCCAGGGAAACCAGGTCCACCACCTCGGCTGGCTATTGCTTGA	1	-	206765176-206765177:206766968-206767015	1q32.1h	Homo sapiens ligatin (LGTN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 2482295] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 2482295] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 2482295] [evidence TAS]	HCA56	HCA56
Homo sapiens	Unigene	Hs.575019	ILMN_127200	HS.575019	Hs.575019		Hs.575019		83114120	DB081288			ILMN_1885170	0001340129	S	464	TCCAAGTTGCCGTGTGAAATGCTGTGTGGGTGAGCACATGGATGGCATGC	3	+	54044057-54044076:54047498-54047527		DB081288 TESTI4 Homo sapiens cDNA clone TESTI4027208 5, mRNA sequence					
Homo sapiens	Unigene	Hs.212820	ILMN_82333	HS.212820	Hs.212820		Hs.212820		6709799	AW300122			ILMN_1827968	0000380440	S	217	GAGCAGGGACATAGGAAGGGGTGATGGAATGAACACCCAGCGATGGTTCC	6	+	6638192-6638241		xs56f03.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2773661 3, mRNA sequence					
Homo sapiens	RefSeq	NM_182649.1	ILMN_6858	PCNA	NM_182649.1	NM_182649.1		5111	33239450	NM_182649.1	PCNA	NP_872590.1	ILMN_1694177	0006900079	A	927	GCGGATATGGGACACTTAAAATACTACTTGGCTCCCAAGATCGAGGATGA	20	-	5095941-5095990	20p12.3c	Homo sapiens proliferating cell nuclear antigen (PCNA), transcript variant 2, mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane [goid 5652] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [pmid 2565339] [evidence TAS]; A protein complex composed of three identical PCNA monomers, each comprising two similar domains, which are joined in a head-to-tail arrangement to form a homotrimer. Forms a ring-like structure in solution, with a central hole sufficiently large to accommodate the double helix of DNA. Originally characterized as a DNA sliding clamp for replicative DNA polymerases and as an essential component of the replisome, and has also been shown to be involved in other processes including Okazaki fragment processing, DNA repair, translesion DNA synthesis, DNA methylation, chromatin remodeling and cell cycle regulation [goid 43626] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA replication [goid 6275] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 15504738] [evidence NAS]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence IEA]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2565339] [evidence TAS]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15358233] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9305916] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15225546] [evidence IPI]; An accessory subunit of DNA polymerase that acts to increase the processivity of polymerization [goid 30337] [evidence IEA]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [pmid 11005803] [evidence IDA]	MGC8367	MGC8367
Homo sapiens	RefSeq	NM_182649.1	ILMN_6858	PCNA	NM_182649.1	NM_182649.1		5111	33239450	NM_182649.1	PCNA	NP_872590.1	ILMN_1706958	0002510348	I	14	GTGAGAGCGCGCGCTTGCGGACGCGGCGGCATTAAACGGTTGCAGGCGTA	20	-	5100584-5100633	20p12.3c	Homo sapiens proliferating cell nuclear antigen (PCNA), transcript variant 2, mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a cell nucleus, composed of lamin filaments. The polypeptides of the lamina are thought to be concerned in the dissolution of the nuclear envelope and its re-formation during mitosis. The lamina is composed of lamin A and lamin C filaments cross-linked into an orthogonal lattice, which is attached via lamin B to the inner nuclear membrane through interactions with a lamin B receptor, an IFAP, in the membrane [goid 5652] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [pmid 2565339] [evidence TAS]; A protein complex composed of three identical PCNA monomers, each comprising two similar domains, which are joined in a head-to-tail arrangement to form a homotrimer. Forms a ring-like structure in solution, with a central hole sufficiently large to accommodate the double helix of DNA. Originally characterized as a DNA sliding clamp for replicative DNA polymerases and as an essential component of the replisome, and has also been shown to be involved in other processes including Okazaki fragment processing, DNA repair, translesion DNA synthesis, DNA methylation, chromatin remodeling and cell cycle regulation [goid 43626] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA replication [goid 6275] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 15504738] [evidence NAS]; Repair of the damaged strand by the combined action of an apurinic endouclease that degrades a few bases on the damaged strand and a polymerase that synthesizes a 'patch' in the 5' to 3' direction, using the undamaged strand as a template [goid 6287] [evidence IEA]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2565339] [evidence TAS]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15358233] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9305916] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15225546] [evidence IPI]; An accessory subunit of DNA polymerase that acts to increase the processivity of polymerization [goid 30337] [evidence IEA]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [pmid 11005803] [evidence IDA]	MGC8367	MGC8367
Homo sapiens	RefSeq	XR_038651.1	ILMN_339698	LOC100131767	XR_038651.1	XR_038651.1		100131767	169162035	XR_038651.1	LOC100131767		ILMN_3281365	0006020131	M	1149	CACCCTGCCTTTGCCCCCTTCCCCAGAAAAGAACACGTTGATCATGGGCG				1q42.13b	PREDICTED: Homo sapiens misc_RNA (LOC100131767), miscRNA.					
Homo sapiens	Unigene	Hs.542112	ILMN_106119	HS.542112	Hs.542112		Hs.542112		11597693	BF512514			ILMN_1903070	0005220402	S	58	ACCAAACACCAGGAAAGTGAGGAGACTGCACTAGAACCAGATAGACCACT	2	+	31837738-31837787		UI-H-BW1-amc-h-10-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3069570 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001105677.1	ILMN_341048	UGT2A2	NM_001105677.1	NM_001105677.1		574537	157787090	NM_001105677.1	UGT2A2	NP_001099147.1	ILMN_3244688	0004060309	S	569	CAGTCTCCTATGTACCGGCAGCCTTATCAGAGCTCACTGACCAGATGACC	4	-	70539305-70539354	4q13.3a	Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide A2 (UGT2A2), mRNA.					
Homo sapiens	RefSeq	NM_178585.1	ILMN_3704	WDFY3	NM_178585.1	NM_178585.1		23001	31317269	NM_178585.1	WDFY3	NP_848700.1	ILMN_1651681	0002140072	I	269	TCTTTTTCCCTGTACTTTGAAACAGCCATTGTGTGCAGGCAGCCCGCTGC	4	-	85822798-85822847	4q21.23b	Homo sapiens WD repeat and FYVE domain containing 3 (WDFY3), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ALFY; KIAA0993; ZFYVE25; MGC16461	ALFY; KIAA0993; ZFYVE25; MGC16461
Homo sapiens	RefSeq	NM_000603.3	ILMN_18267	NOS3	NM_000603.3	NM_000603.3		4846	48762674	NM_000603.3	NOS3	NP_000594.2	ILMN_1775224	0002480195	S	4141	GTACCCCAGGGCCTACTGCCACCCGCTTCCTGTTTCTTAGTCGAATGTTA	7	+	150342426-150342475	7q36.1c-q36.1d	Homo sapiens nitric oxide synthase 3 (endothelial cell) (NOS3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9580552] [evidence EXP]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9188442] [evidence EXP]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 16722822] [evidence EXP]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 10781589] [evidence EXP]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 11149895] [evidence EXP]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 16807357] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7512951] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10559837] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 17502619] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 17848177] [evidence IDA]	The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence ISS]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence IEA]; The process by which endothelin modulates the force with which blood passes through the circulatory system. Endothelin is a hormone that is released by the endothelium, and it is a vasoconstrictor [goid 3100] [pmid 8999856] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [pmid 1378832] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [pmid 7488039] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a mitochondrion; includes mitochondrial morphology and distribution, and replication of the mitochondrial genome as well as synthesis of new mitochondrial components [goid 7005] [evidence ISS]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 7504210] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 18048451] [evidence NAS]; Any process that decreases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue [goid 10544] [pmid 7504210] [evidence NAS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of muscle hyperplasia [goid 14740] [evidence ISS]; A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ [goid 14806] [evidence ISS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of guanylate cyclase activity [goid 31284] [pmid 17502619] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of guanylate cyclase activity [goid 31284] [evidence ISS]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface [goid 34405] [pmid 10376603] [evidence IEP]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43267] [evidence IEA]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [pmid 8999856] [evidence IMP]; Any process that activates or increases angiogenesis [goid 45766] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of vasodilation [goid 45909] [pmid 18048451] [evidence NAS]; Any process that modulates the size of blood vessels [goid 50880] [evidence ISS]; Any process that modulates the size of blood vessels [goid 50880] [pmid 7504210] [evidence NAS]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51926] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [pmid 17502619] [evidence IPI]; Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+ [goid 4517] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a tetrahydrobiopterin, 5,6,7,8-tetrahydrobiopterin or a derivative thereof; tetrahydrobiopterins are enzyme cofactors that carry electrons in redox reactions [goid 34617] [pmid 7488039] [evidence IDA]; Interacting selectively with 2-amino-5-(carbamimidamido)pentanoic acid [goid 34618] [pmid 7488039] [evidence IDA]; Interacting selectively with cadmium (Cd) ions [goid 46870] [pmid 7488039] [evidence NAS]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]	eNOS; ECNOS; NOS III	eNOS; ECNOS; NOS III
Homo sapiens	RefSeq	NM_000726.2	ILMN_28777	CACNB4	NM_000726.2	NM_000726.2		785	54607063	NM_000726.2	CACNB4	NP_000717.2	ILMN_1685164	0004210202	I	29	TCCTCCTACGCCAAGAACGGGACCGCGGACGGGCCGCACTCCCCCACCTC	2	-	152663712-152663761	2q23.3c	Homo sapiens calcium channel, voltage-dependent, beta 4 subunit (CACNB4), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8825650] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16525042] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 16525042] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [pmid 16385006] [evidence TAS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [pmid 16525042] [evidence IDA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51925] [pmid 11880487] [evidence IDA]	Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 16525042] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16525042] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [pmid 11880487] [evidence IDA]	EA5; CACNLB4; CAB4; EJM	EA5; CACNLB4; CAB4; EJM
Homo sapiens	RefSeq	NM_004068.3	ILMN_174689	AP2M1	NM_004068.3	NM_004068.3		1173	68798812	NM_004068.3	AP2M1	NP_004059.2	ILMN_1699598	0000240187	A	1661	GGAGTTCTGAGGCTCCTGCTCTCCCATCCACCTGTCTGTCCTGGCCTAAT	3	+	183901600-183901649	3q27.1b	Homo sapiens adaptor-related protein complex 2, mu 1 subunit (AP2M1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [pmid 17108328] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2014052] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16103193] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285224] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17108328] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11285224] [evidence EXP]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex [goid 30132] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism [goid 50690] [pmid 16103193] [evidence EXP]; Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism [goid 50690] [pmid 11285224] [evidence EXP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 7989329] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8595912] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12032142] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	AP50; mu2; CLAPM1	AP50; mu2; CLAPM1
Homo sapiens	RefSeq	NM_004068.3	ILMN_174689	AP2M1	NM_004068.3	NM_004068.3		1173	68798812	NM_004068.3	AP2M1	NP_004059.2	ILMN_2402798	0000840148	A	1595	TCTAGGTCTGGGCCAAGCACATTACAAGTGGGACCGGTGGAGCAGCCCCT	3	+	183901534-183901583	3q27.1b	Homo sapiens adaptor-related protein complex 2, mu 1 subunit (AP2M1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [pmid 17108328] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2014052] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16103193] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285224] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17108328] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11285224] [evidence EXP]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex [goid 30132] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism [goid 50690] [pmid 16103193] [evidence EXP]; Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism [goid 50690] [pmid 11285224] [evidence EXP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 7989329] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8595912] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12032142] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	AP50; mu2; CLAPM1	AP50; mu2; CLAPM1
Homo sapiens	RefSeq	NM_012071.2	ILMN_29871	COMMD3	NM_012071.2	NM_012071.2		23412	56676372	NM_012071.2	COMMD3	NP_036203.1	ILMN_1690392	0001230523	S	689	GCCTTCAGCTGAACCACCGTTTGTGCGAGCTGGATGTCCTTTTCAGTAGA	10	+	22608980-22609029	10p12.31a	Homo sapiens COMM domain containing 3 (COMMD3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15799966] [evidence IPI]	C10orf8; DKFZp686K0399; BUP; FLJ45471	C10orf8; DKFZp686K0399; BUP; FLJ45471
Homo sapiens	RefSeq	XM_001722392.1	ILMN_339830	LOC100128574	XM_001722392.1	XM_001722392.1		100128574	169216355	XM_001722392.1	LOC100128574	XP_001722444.1	ILMN_3182215	0001820017	A	489	TGTGTTTCCCTTCCACCGATTACCAGAAAGGGACGGCATCTTCCCCTGGG				Xq22.1c	PREDICTED: Homo sapiens hypothetical protein LOC100128574 (LOC100128574), mRNA.					
Homo sapiens	RefSeq	XM_001722392.1	ILMN_339830	LOC100128574	XM_001722392.1	XM_001722392.1		100128574	169216355	XM_001722392.1	LOC100128574	XP_001722444.1	ILMN_3258678	0001450692	M	6	CTGCAGGATGACAGATCGAAAACATGGAGACTCACCGTTTCGCAGCATCG				Xq22.1c	PREDICTED: Homo sapiens hypothetical protein LOC100128574 (LOC100128574), mRNA.					
Homo sapiens	RefSeq	NM_002734.3	ILMN_18925	PRKAR1A	NM_002734.3	NM_002734.3		5573	47132579	NM_002734.3	PRKAR1A	NP_002725.1	ILMN_2389590	0007050021	A	3464	CTGCTCTAGAAAGTATAGATGGCCAAAGGACCGTTTTGTATTGCTTCCTG	17	+	64040350-64040399	17q24.2c	Homo sapiens protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) (PRKAR1A), transcript variant 1, mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]	The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1832337] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15655353] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [pmid 3426618] [evidence TAS]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]	CAR; PPNAD1; MGC17251; TSE1; CNC; CNC1; PKR1; PRKAR1; DKFZp779L0468	CAR; PPNAD1; MGC17251; TSE1; CNC; CNC1; PKR1; PRKAR1; DKFZp779L0468
Homo sapiens	RefSeq	NM_004860.2	ILMN_28297	FXR2	NM_004860.2	NM_004860.2		9513	6598321	NM_004860.2	FXR2	NP_004851.1	ILMN_1738699	0005690280	S	2607	TGCTATCCCTCCTCCCATCCTGTACCCCCCATTTCTGGGGCCTCATCACT	17	-	7435459-7435508	17p13.1d	Homo sapiens fragile X mental retardation, autosomal homolog 2 (FXR2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9259278] [evidence TAS]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 9259278] [evidence TAS]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7489725] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	FMR1L2	FMR1L2
Homo sapiens	RefSeq	NR_031687.1	ILMN_388737	MIR548I1	NR_031687.1	NR_031687.1		100302204	269847438	NR_031687.1	MIR548I1		ILMN_3308540	0006580632	S	97	CCAGCCTAGTATCTTTTCTCCTTCTACCAAACTTTGTCCCTGAGCCATCT					Homo sapiens microRNA 548i-1 (MIR548I1), microRNA.					
Homo sapiens	RefSeq	XM_936544.1	ILMN_34998	LOC647480	XM_936544.1	XM_936544.1		647480	89060862	XM_936544.1	LOC647480	XP_941637.1	ILMN_1715425	0006650400	S	181	GTTCCCAGTCCTGGGTTTGGCTTTCCTCACCTTATCATTGAGGACAAGGA					PREDICTED: Homo sapiens similar to poly(A) binding protein, cytoplasmic 1 (LOC647480), mRNA.					
Homo sapiens	RefSeq	NR_001527.1	ILMN_7412	TTTY6	NR_001527.1	NR_001527.1		84672	32563529	NR_001527.1	TTTY6		ILMN_2211956	0004390538	S	228	AAGAGGCTGTGTGCAAGAATTGAGTCCCAGGGGGACTGGAATGTTGTCTG	Y	-	24585954-24585978:24587136-24587160	Yq11.223c	Homo sapiens testis-specific transcript, Y-linked 6 (non-protein coding) (TTTY6), non-coding RNA.				TTY6; TTTY6A	TTY6; TTTY6A
Homo sapiens	RefSeq	NR_001527.1	ILMN_7412	TTTY6	NR_001527.1	NR_001527.1		84672	32563529	NR_001527.1	TTTY6		ILMN_2211959	0003360497	S	3	AGGCCTGCCTAGATGTTGTAGGGGATCATGAGACTATCCTGTGTATCCCA	Y	-	24587554-24587603	Yq11.223c	Homo sapiens testis-specific transcript, Y-linked 6 (non-protein coding) (TTTY6), non-coding RNA.				TTY6; TTTY6A	TTY6; TTTY6A
Homo sapiens	RefSeq	NM_203379.1	ILMN_6741	ACSL5	NM_016234.3	NM_016234.3		51703	42794755	NM_016234.3	ACSL5	NP_057318.2	ILMN_1705247	0007040286	A	3238	CCAACTGATCTCCCCCACCCTTGGATTAGAGTTCCTGCTCTACCTTACCC	10	+	114175087-114175136	10q25.2b	Homo sapiens acyl-CoA synthetase long-chain family member 5 (ACSL5), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	ACS2; FACL5; ACS5	ACS2; FACL5; ACS5
Homo sapiens	RefSeq	NM_016234.3	ILMN_6741	ACSL5	NM_016234.3	NM_016234.3		51703	42794755	NM_016234.3	ACSL5	NP_057318.2	ILMN_1678517	0006400707	I	176	TCGTGTGGCAGGAAGAACTCAGAGCCGGGAAGCCCCCATTCACTAGAAGC	10	+	114126121-114126170	10q25.2b	Homo sapiens acyl-CoA synthetase long-chain family member 5 (ACSL5), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	ACS2; FACL5; ACS5	ACS2; FACL5; ACS5
Homo sapiens	RefSeq	NM_001004741.1	ILMN_30216	OR5M10	NM_001004741.1	NM_001004741.1		390167	52317260	NM_001004741.1	OR5M10	NP_001004741.1	ILMN_1710884	0001510066	S	422	GCATCTCTCTGGTCACTGTGCCTTACATGTATGGCTTCCTTAATGGGCTC	11	-	56344726-56344775	11q11c	Homo sapiens olfactory receptor, family 5, subfamily M, member 10 (OR5M10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-207	OR11-207
Homo sapiens	RefSeq	NM_033158.2	ILMN_19286	HYAL2	NM_033158.2	NM_033158.2		8692	34304376	NM_033158.2	HYAL2	NP_149348.2	ILMN_1665916	0002230768	I	45	TGGGCTGGGCCCGGGATGGCGGTGGCCCTGGCGCCGGTCCCGGTGGCGCC	3	-	50333809-50333858	3p21.31b	Homo sapiens hyaluronoglucosaminidase 2 (HYAL2), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 9712871] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars [goid 6027] [pmid 9712871] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [pmid 9712871] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	LuCa-2; LUCA2	LuCa-2; LUCA2
Homo sapiens	RefSeq	NM_000309.2	ILMN_9419	PPOX	NM_000309.2	NM_000309.2		5498	45439340	NM_000309.2	PPOX	NP_000300.1	ILMN_1673798	0003120609	S	1512	AGCTAGGCAATTCCTGACTGCTCACAGGTTGCCCCTGACTCTGGCTGGAG	1	+	159407452-159407501	1q23.3a	Homo sapiens protoporphyrinogen oxidase (PPOX), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 8771201] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in the mitochondrial inner membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31304] [evidence ISS]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [pmid 7713909] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 7713909] [evidence IDA]	Catalysis of the reaction: protoporphyrinogen-IX + O2 = protoporphyrin-IX + H2O2 [goid 4729] [pmid 7713909] [evidence IDA]; Catalysis of the reaction: protoporphyrinogen-IX + O2 = protoporphyrin-IX + H2O2 [goid 4729] [pmid 8771201] [evidence EXP]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [pmid 7713909] [evidence TAS]	MGC8485; VP; PPO; V290M	MGC8485; VP; PPO; V290M
Homo sapiens	RefSeq	XM_944676.1	ILMN_138499	ITGB5	XM_944676.1	XM_944676.1		3693	88970815	XM_944676.1	ITGB5	XP_949769.1	ILMN_1701619	0006380142	I	1027	GTCAGGAGCTCAGGGACAGGTGTGGGACTGTTCTACATTATCTGACACCC				3q21.2a	PREDICTED: Homo sapiens integrin, beta 5, transcript variant 3 (ITGB5), mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_003135.1	ILMN_5419	SRP19	NM_003135.1	NM_003135.1		6728	4507212	NM_003135.1	SRP19	NP_003126.1	ILMN_2192032	0004210431	S	297	GAATCGTGATGTCCAATACAGAGGCAGAGTCCGGGTCCAGCTCAAACAGG	5	+	112200344-112200393	5q22.2a	Homo sapiens signal recognition particle 19kDa (SRP19), mRNA.	A complex of protein and RNA which facilitates translocation of proteins across membranes [goid 48500] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [pmid 1678319] [evidence TAS]	The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]; The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]	Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [evidence IEA]; Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [evidence IEA]		
Homo sapiens	RefSeq	NM_052841.3	ILMN_29356	TSSK3	NM_052841.3	NM_052841.3		81629	61744443	NM_052841.3	TSSK3	NP_443073.1	ILMN_1760369	0002450010	S	1025	GCATGGGTGTGGTCCTGTATGTCATGCTCTGTGCCAGCCTACCTTTTGAC	1	+	32602221-32602270	1p35.1b	Homo sapiens testis-specific serine kinase 3 (TSSK3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	STK22D; STK22C; SPOGA3	STK22D; STK22C; SPOGA3
Homo sapiens	RefSeq	NM_001065.2	ILMN_173343	TNFRSF1A	NM_001065.2	NM_001065.2		7132	23312372	NM_001065.2	TNFRSF1A	NP_001056.1	ILMN_1685005	0004670750	S	1891	GAGGGACGCTATGCCTCATGCCCGTTTTGGGTGTCCTCACCAGCAAGGCT	12	-	6438186-6438235	12p13.31d	Homo sapiens tumor necrosis factor receptor superfamily, member 1A (TNFRSF1A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12189246] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12887920] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7758105] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2848815] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1698610] [evidence TAS]	The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [pmid 2158863] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11684708] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9115275] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15465831] [evidence IPI]	TNFR1; p60; CD120a; p55-R; TNFR60; TNF-R55; TNFAR; TBP1; TNF-R-I; TNFR55; FPF; TNF-R; p55; MGC19588	TNFR1; p60; CD120a; p55-R; TNFR60; TNF-R55; TNFAR; TBP1; TNF-R-I; TNFR55; FPF; TNF-R; p55; MGC19588
Homo sapiens	RefSeq	NM_032372.3	ILMN_21406	DYDC2	NM_032372.4	NM_032372.4		84332	142381171	NM_032372.4	DYDC2	NP_115748.1	ILMN_1760513	0004780164	S	1750	TCTCTCCCCAGCCCCTGGCAACCACCATTCTTTCTGTCTCTGTGATTTAG	10	+	82117693-82117742	10q23.1a	Homo sapiens DPY30 domain containing 2 (DYDC2), mRNA.				MGC16186; bA36D19.6	MGC16186; bA36D19.6
Homo sapiens	RefSeq	NM_014012.4	ILMN_5270	REM1	NM_014012.4	NM_014012.4		28954	35493898	NM_014012.4	REM1	NP_054731.2	ILMN_1719811	0004200142	S	1500	AGGATGTCCCATCTGAATGCCCAGACCTCTCCATCTCGGCTCTTCCAGGC	20	+	29536213-29536262	20q11.21b	Homo sapiens RAS (RAD and GEM)-like GTP-binding 1 (REM1), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	GD:REM; REM; GES; MGC48669	GD:REM; REM; GES; MGC48669
Homo sapiens	RefSeq	NM_145060.1	ILMN_34143	SKA1	NM_145060.3	NM_145060.3		220134	154689618	NM_145060.3	SKA1	NP_659497.1	ILMN_1771224	0002030630	S	2524	GATGGGCACCTGGATAACTCAGGATGGGGGCTGCTCACAAAGACCACATC	18	+	46174187-46174236	18q21.1g	Homo sapiens spindle and kinetochore associated complex subunit 1 (SKA1), transcript variant 2, mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		MGC10200; Ska1	MGC10200
Homo sapiens	RefSeq	NM_015185.1	ILMN_2351	ARHGEF9	NM_015185.1	NM_015185.1		23229	7662107	NM_015185.1	ARHGEF9	NP_056000.1	ILMN_1779370	0001070196	S	4841	CAGACCAGTGGCCAACAGCCCCAAGGGGAGCCCAATTAAATACCTGGGTT	X	-	62772094-62772143	Xq11.1b	Homo sapiens Cdc42 guanine nucleotide exchange factor (GEF) 9 (ARHGEF9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	PEM2; HPEM-2; PEM-2; KIAA0424; COLLYBISTIN	PEM2; HPEM-2; PEM-2; KIAA0424; COLLYBISTIN
Homo sapiens	RefSeq	XR_017321.2	ILMN_173525	LOC201651	XR_017321.2	XR_017321.2		201651	169165209	XR_017321.2	LOC201651		ILMN_3281480	0005550494	M	1001	CCCCTTTGTTGGCCAATGACAAGTTACATGGTTTACCCCTGTCCTATATC	3	+	152984661-152984710	3q25.1c	PREDICTED: Homo sapiens misc_RNA (LOC201651), miscRNA.					
Homo sapiens	RefSeq	XR_017321.2	ILMN_173525	LOC201651	XR_017321.2	XR_017321.2		201651	169165209	XR_017321.2	LOC201651		ILMN_3204975	0000430528	A	1337	CATCTGTGACCTTTCTAAGGTCCTCATAGCCATAGTGGGTTTTGGTTTTG	3	+	152984997-152985046	3q25.1c	PREDICTED: Homo sapiens misc_RNA (LOC201651), miscRNA.					
Homo sapiens	RefSeq	NM_172164.1	ILMN_25609	NASP	NM_172164.1	NM_172164.1		4678	27262633	NM_172164.1	NASP	NP_751896.1	ILMN_1764778	0000380368	I	212	ACCATTAATCTGCTTTCTGTCACTGAAGATGGGTTGCATTTTGTAGAATA	1	+	45838646-45838695	1p34.1b	Homo sapiens nuclear autoantigenic sperm protein (histone-binding) (NASP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence ISS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence ISS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits [goid 43486] [evidence ISS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [evidence ISS]	MGC20372; MGC2297; DKFZp547F162; PRO1999; FLJ35510; FLJ31599; MGC19722; FLB7527	MGC20372; MGC2297; DKFZp547F162; PRO1999; FLJ35510; FLJ31599; MGC19722; FLB7527
Homo sapiens	RefSeq	NM_032536.1	ILMN_29466	NTNG2	NM_032536.1	NM_032536.1		84628	19387853	NM_032536.1	NTNG2	NP_115925.1	ILMN_1806448	0000150647	S	1863	CCTTGGGACTCCGGTCCCCGCGCCTGCGATTTGGTTTCGTTTTTCTTTTG	9	+	134107504-134107553	9q34.13b	Homo sapiens netrin G2 (NTNG2), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	bA479K20.1; KIAA0625; LHLL9381; Lmnt2; MGC21884; NTNG1; KIAA1857	bA479K20.1; KIAA0625; LHLL9381; Lmnt2; MGC21884; NTNG1; KIAA1857
Homo sapiens	RefSeq	NM_000680.1	ILMN_15853	ADRA1A	NM_000680.2	NM_000680.2		148	111118991	NM_000680.2	ADRA1A	NP_000671.2	ILMN_1780551	0001110731	I	1970	TAGACCCAACTCATCAGGCAGCGGGTAGGGCACAGGGAAGAGGGAGGGTG	8	-	26722222-26722271	8p21.2a	Homo sapiens adrenergic, alpha-1A-, receptor (ADRA1A), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8396931] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction as a result of the baroreceptor response to increased blood pressure [goid 1985] [evidence IEA]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IEA]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IEA]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10671514] [evidence TAS]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 8183249] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8396931] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10860850] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10671514] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8396931] [evidence TAS]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10860850] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA];  [goid 4937] [pmid 9490024] [evidence NAS];  [goid 4937] [pmid 7737411] [evidence TAS]	ADRA1C; ALPHA1AAR; ADRA1L1	ADRA1C; ALPHA1AAR; ADRA1L1
Homo sapiens	RefSeq	XM_935652.1	ILMN_171492	LOC402635	XM_001132682.1	XM_001132682.1		402635	113418927	XM_001132682.1	LOC402635	XP_001132682.1	ILMN_1696781	0002900367	S	2	TGGCATTGCTGGACTGCTGTGCCCAGCGGACGGGCTGCCCCCTGCAGGGC				7p22.2c	PREDICTED: Homo sapiens similar to galectin-related inter-fiber protein (LOC402635), mRNA.					
Homo sapiens	RefSeq	NM_139172.1	ILMN_973	TMEM190	NM_139172.1	NM_139172.1		147744	21040262	NM_139172.1	TMEM190	NP_631911.1	ILMN_1815773	0006200537	S	213	GGTCTGCTACCACCAGCGTCCAGACGAAAACGTGCGGAGGAAGCACATGT	19	+	55889061-55889086:55889170-55889193	19q13.42b	Homo sapiens transmembrane protein 190 (TMEM190), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MDAC1; MGC149302; MGC149301	MDAC1; MGC149302; MGC149301
Homo sapiens	RefSeq	NM_170721.1	ILMN_25750	MSI2	NM_170721.1	NM_170721.1		124540	25121992	NM_170721.1	MSI2	NP_733839.1	ILMN_1804448	0007040369	I	1680	GACGTACCACTCAGTTGGACCCTCAAGAGTCACTGCTTTGTCTGTGCTGG	17	+	53065080-53065129	17q22c-q22d	Homo sapiens musashi homolog 2 (Drosophila) (MSI2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Several ribosomes bound to one mRNA [goid 5844] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [evidence IEA]	FLJ36569; MSI2H; MGC3245	FLJ36569; MSI2H; MGC3245
Homo sapiens	RefSeq	XM_942541.1	ILMN_46939	LOC652843	XM_942541.1	XM_942541.1		652843	89064961	XM_942541.1	LOC652843	XP_947634.1	ILMN_1683115	0006560719	S	3	GCTCCTGTCTCCCTCACCTTACCACAACCTACACTCGCTTTTGCTTCAGA					PREDICTED: Homo sapiens similar to cytochrome P450 4Z1 (LOC652843), mRNA.					
Homo sapiens	RefSeq	NM_152325.1	ILMN_10811	C13ORF26	NM_152325.1	NM_152325.1		122046	22748710	NM_152325.1	C13orf26	NP_689538.1	ILMN_2206294	0000940551	S	718	GACCACATACCAAAGTGACTACGACAAAACCTACCCAGATTTCTTAATGC	13	+	30441074-30441123	13q12.3d	Homo sapiens chromosome 13 open reading frame 26 (C13orf26), mRNA.				MGC40178	MGC40178
Homo sapiens	RefSeq	NM_152325.1	ILMN_10811	C13ORF26	NM_152325.1	NM_152325.1		122046	22748710	NM_152325.1	C13orf26	NP_689538.1	ILMN_1726054	0004860612	S	539	CTTCCCCAACCTCCAGACACTGAATTCCGAAGGAATTACCAAATTCCAGC	13	+	30438409-30438458	13q12.3d	Homo sapiens chromosome 13 open reading frame 26 (C13orf26), mRNA.				MGC40178	MGC40178
Homo sapiens	RefSeq	XM_943524.1	ILMN_35243	KIAA0888	XM_943524.1	XM_943524.1		26049	88988237	XM_943524.1	KIAA0888	XP_948617.1	ILMN_1747547	0000240376	I	840	GTGTCCACAGAGCATCCTGGTCCTGCCCCATCTTTCCTTAAGAGCAGTGG				5q13.3b	PREDICTED: Homo sapiens KIAA0888 protein, transcript variant 2 (KIAA0888), mRNA.					
Homo sapiens	Unigene	Hs.72488	ILMN_73511	HS.72488	Hs.72488		Hs.72488		5053734	AI732621			ILMN_1826914	0002140451	S	172	CATCCTGCCAGCTTCCCAGCCAACAAAGAGAGCACAGGGGATGAGATGGC	6	+	138304021-138304070		zo97g10.x5 Stratagene ovarian cancer (#937219) Homo sapiens cDNA clone IMAGE:594882 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001013748.1	ILMN_309618	LOC541473	NR_003602.1	NR_003602.1		541473	150378496	NR_003602.1	LOC541473		ILMN_1745071	0004260358	S	670	CTCCTGCGTAACCTTCTGCCTACCTTCCTGAGAGTGGTTGGTGACAGCAG	7	-	75021489-75021538	7q11.23d	Homo sapiens FK506 binding protein 6, 36kDa pseudogene (LOC541473), non-coding RNA.				MGC88170	MGC88170
Homo sapiens	Unigene	Hs.572624	ILMN_124805	HS.572624	Hs.572624		Hs.572624		9511964	BE466189			ILMN_1828111	0005390014	S	20	CTTACCTCCAGATGGTCACATCATGAGATCTTCTTGCTCCAGCACTGTGG	19	-	58920484-58920533		hz27a12.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:3209182 3, mRNA sequence					
Homo sapiens	Unigene	Hs.568712	ILMN_120893	HS.568712	Hs.568712		Hs.568712		80506383	DA188950			ILMN_1871154	0000240609	S	62	GGGCAAACCAGCACCTAAGCATCAAGGGTGGAAAGGGAGACTGGAAGTGC	1	+	191693493-191693502:191697325-191697364		DA188950 BRAMY3 Homo sapiens cDNA clone BRAMY3010483 5, mRNA sequence					
Homo sapiens	RefSeq	XM_936251.1	ILMN_43942	LOC653888	XM_936251.2	XM_936251.2		653888	113419194	XM_936251.2	LOC653888	XP_941344.1	ILMN_1804530	0004860093	S	710	CTCTGGCCTCTGAAACACTACCACTCGTGGCGCTGACCTTCATCACAGAC					PREDICTED: Homo sapiens similar to Actin-related protein 2/3 complex subunit 1B (ARP2/3 complex 41 kDa subunit) (p41-ARC) (LOC653888), mRNA.					
Homo sapiens	RefSeq	NM_178004.1	ILMN_41935	PRIMA1	NM_178013.2	NM_178013.2		145270	90855779	NM_178013.2	PRIMA1	NP_821092.1	ILMN_1765299	0005820044	A	551	CTGGTGGACATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCC	14	-	93257446-93257495	14q32.13a	Homo sapiens proline rich membrane anchor 1 (PRIMA1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]		PRIMA	PRIMA
Homo sapiens	RefSeq	NM_003434.3	ILMN_5864	ZNF133	NM_003434.3	NM_003434.3		7692	40807453	NM_003434.3	ZNF133	NP_003425.2	ILMN_2174081	0001940494	S	2370	TCAAGTCTCACCTCAGCAGACACAGGAAGACCACGTCTGTCCACCACAGA	20	+	18245345-18245394	20p11.23d	Homo sapiens zinc finger protein 133 (ZNF133), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9278146] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF150; pHZ-13; pHZ-66	ZNF150; pHZ-13; pHZ-66
Homo sapiens	RefSeq	NM_182484.1	ILMN_14146	BAGE5	NM_182484.1	NM_182484.1		85316	32699144	NM_182484.1	BAGE5	NP_872290.1	ILMN_2206141	0007380148	S	1791	TGGCCAAGGAGCAGAAGGAGGATTACTTGCCTGTTCTCAGTGTGGTCAGT					Homo sapiens B melanoma antigen family, member 5 (BAGE5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	RefSeq	XM_942593.1	ILMN_41288	LOC652877	XM_942593.1	XM_942593.1		652877	89065155	XM_942593.1	LOC652877	XP_947686.1	ILMN_1787233	0004060711	S	9	CTCTTTGAAGCAGAGACGATTTGAAAGGGAGCACCTTCACAGAATGGCCC					PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, non-receptor type 20 (LOC652877), mRNA.					
Homo sapiens	RefSeq	XM_929155.1	ILMN_39929	LOC643598	XM_929155.1	XM_929155.1		643598	88942971	XM_929155.1	LOC643598	XP_934248.1	ILMN_1694082	0007040360	S	61	GGCCCACCAGAGAAATGAACTGGGCCCACTCAGGGCAGTCATCCCGGTAT	1	-	115680322-115680371		PREDICTED: Homo sapiens hypothetical protein LOC643598 (LOC643598), mRNA.					
Homo sapiens	RefSeq	NM_001077180.1	ILMN_173884	METTL9	NM_001077180.1	NM_001077180.1		51108	116014333	NM_001077180.1	METTL9	NP_001070648.1	ILMN_2402629	0001570743	A	2440	AGAAGTCATCAGATCAACACATTCACTCCAACACCTGGGTATAAAGGCGA	16	+	21575541-21575590	16p12.2a	Homo sapiens methyltransferase like 9 (METTL9), transcript variant 2, mRNA.				PAP1; FLJ21912; CGI-81; DREV1; DREV	PAP1; FLJ21912; CGI-81; DREV1; DREV
Homo sapiens	RefSeq	NM_176877.1	ILMN_3069	INADL	NM_176877.2	NM_176877.2		10207	112382256	NM_176877.2	INADL	NP_795352.2	ILMN_1747318	0002320678	A	4439	AGGGACGTTCAGGGCTTGGTCTCAGCATTGTGGGAGGAAAAGACACACCC	1	+	62232105-62232145:62234955-62234963	1p31.3d	Homo sapiens InaD-like (Drosophila) (INADL), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9280290] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9280290] [evidence NAS]	Cipp; FLJ26982; PATJ	Cipp; PATJ
Homo sapiens	RefSeq	NM_170605.2	ILMN_3069	INADL	NM_176877.2	NM_176877.2		10207	112382256	NM_176877.2	INADL	NP_795352.2	ILMN_1773312	0007000121	I	5448	CCACCTTGGTTCGCCCACTGCTGAACACCATCCAGAAGACACAGAGGAGC	1	+	62262959-62263008	1p31.3d	Homo sapiens InaD-like (Drosophila) (INADL), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9280290] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9280290] [evidence NAS]	Cipp; FLJ26982; PATJ	Cipp; PATJ
Homo sapiens	RefSeq	XM_942803.1	ILMN_38784	LOC152578	XM_942803.1	XM_942803.1		152578	88980291	XM_942803.1	LOC152578	XP_947896.1	ILMN_1676550	0007040390	A	473	CAGACTTGAACTGCAATACCGGCTCTTCCTGGCTTTCCAGCTTGTGGGCC					PREDICTED: Homo sapiens hypothetical protein LOC152578 (LOC152578), mRNA.					
Homo sapiens	RefSeq	NM_000674.2	ILMN_177336	ADORA1	NM_000674.2	NM_000674.2		134	115305570	NM_000674.2	ADORA1	NP_000665.1	ILMN_2275396	0002100110	I	309	CCCGGAGCTCTGTTCCCTGGAACTTTGGGCACTGCCTCTGGGACCCCTGC	1	+	201364116-201364165	1q32.1d-q32.1e	Homo sapiens adenosine A1 receptor (ADORA1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1530647] [evidence TAS]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [pmid 8360491] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 8360491] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1530647] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7818494] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8450977] [evidence TAS]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 7818494] [evidence TAS]	Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	RDC7	RDC7
Homo sapiens	RefSeq	NM_000674.2	ILMN_177336	ADORA1	NM_000674.2	NM_000674.2		134	115305570	NM_000674.2	ADORA1	NP_000665.1	ILMN_2373444	0003830148	A	2589	GGGTCTAGGACTTTAGGGATCTGGGGAAGGACCAACCCATGCCCTGCCAA	1	+	201402826-201402875	1q32.1d-q32.1e	Homo sapiens adenosine A1 receptor (ADORA1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1530647] [evidence TAS]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [pmid 8360491] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 8360491] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1530647] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7818494] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8450977] [evidence TAS]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 7818494] [evidence TAS]	Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	RDC7	RDC7
Homo sapiens	RefSeq	NR_001569.1	ILMN_24129	ADAM3A	NR_001569.1	NR_001569.1		1587	35215293	NR_001569.1	ADAM3A		ILMN_2223911	0004150292	S	1833	GCATGTGGCCAACACAAGGTATGTCACTCCCGAGAATGCAGAAATTTTAG	8	-	39444346-39444376:39450158-39450176	8p11.23a	Homo sapiens ADAM metallopeptidase domain 3A (cyritestin 1) (ADAM3A) on chromosome 8.				CYRN1; ADAM3; tMDCI	CYRN1; ADAM3; tMDCI
Homo sapiens	RefSeq	NR_001569.1	ILMN_24129	ADAM3A	NR_001569.1	NR_001569.1		1587	35215293	NR_001569.1	ADAM3A		ILMN_1795204	0001430241	S	1962	CCTGGTTATGCTCCTCCAGATTGTGAGCCAGCAATGTCATCACCAGGAGG	8	-	39442554-39442603	8p11.23a	Homo sapiens ADAM metallopeptidase domain 3A (cyritestin 1) (ADAM3A) on chromosome 8.				CYRN1; ADAM3; tMDCI	CYRN1; ADAM3; tMDCI
Homo sapiens	RefSeq	XM_498330.2	ILMN_24129	ADAM3A	NR_001569.1	NR_001569.1		1587	35215293	NR_001569.1	ADAM3A		ILMN_1669486	0001170390	S	1108	CAAAAATGACTTACCGAAAATCTTCAACTTGTGGCAATGGAATTTTGGAA	8	-	39468536-39468585	8p11.23a	Homo sapiens ADAM metallopeptidase domain 3A (cyritestin 1) (ADAM3A) on chromosome 8.				CYRN1; ADAM3; tMDCI	
Homo sapiens	RefSeq	NM_004612.2	ILMN_20708	TGFBR1	NM_004612.2	NM_004612.2		7046	66346739	NM_004612.2	TGFBR1	NP_004603.1	ILMN_1745927	0001410379	S	6272	TGATGAGATGTGGTCCCCAAACCCTTGATTGACTCTGGGGAGGGGCTTTG	9	+	100956092-100956141	9q22.33c	Homo sapiens transforming growth factor, beta receptor 1 (TGFBR1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9865696] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11100470] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8242743] [evidence TAS]; Any protein group composed of two or more subunits, which may or may not be identical, which undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43235] [pmid 8774881] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12065756] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 14633705] [evidence IDA]; The aggregation, arrangement and bonding together of a ligand-bound type II transforming growth factor beta (TGF-beta) receptor dimer with a type I TGF-beta receptor dimer, following ligand binding, to form a heterotetrameric TGF-beta receptor complex [goid 7181] [pmid 8242743] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 14633705] [evidence IMP]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 14517293] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 15702480] [evidence IMP]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IEA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IEA]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IEA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IEA]; The process whose specific outcome is the progression of the pharyngeal system over time, from its formation to the mature structure. The pharyngeal system is a transient embryonic complex that is specific to vertebrates. It comprises the pharyngeal arches, bulges of tissues of mesoderm and neural crest derivation through which pass nerves and pharyngeal arch arteries. The arches are separated internally by pharyngeal pouches, evaginations of foregut endoderm, and externally by pharyngeal clefts, invaginations of surface ectoderm. The development of the system ends when the stucture it contributes to are forming: the thymus, thyroid, parathyroids, maxilla, mandible, aortic arch, cardiac outflow tract, external and middle ear [goid 60037] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity; upon ligand binding, catalyzes the phosphorylation of a type I TGF-beta receptor [goid 5025] [pmid 8242743] [evidence TAS]; Interacting selectively with a type II transforming growth factor beta receptor [goid 5114] [pmid 11157754] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12065756] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 12065756] [evidence IDA]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [pmid 14633705] [evidence IDA]	ACVRLK4; ALK-5; TGFR-1; ALK5; AAT5; SKR4	ACVRLK4; ALK-5; TGFR-1; ALK5; AAT5; SKR4
Homo sapiens	RefSeq	NM_001076675.2	ILMN_364937	ZNF626	NM_001076675.2	NM_001076675.2		199777	194248054	NM_001076675.2	ZNF626	NP_001070143.1	ILMN_3250446	0001820082	I	5795	ATGGCTTATGGCTCGGATTCTCCCCAGAATCCGTGTATTAAAGCACAGGC	19	-	20802988-20803037	19p12d	Homo sapiens zinc finger protein 626 (ZNF626), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_006112.2	ILMN_12919	PPIE	NM_006112.2	NM_006112.2		10450	45439314	NM_006112.2	PPIE	NP_006103.1	ILMN_2348503	0002690634	A	723	AGCATACGGGACCAGGTCTACTATCCATGGCCAACTCTGGCCCAAACACC	1	+	39987333-39987347:39991169-39991203	1p34.2d	Homo sapiens peptidylprolyl isomerase E (cyclophilin E) (PPIE), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11313484] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11313484] [evidence IMP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11313484] [evidence TAS]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [pmid 11313484] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11313484] [evidence IPI]; Interacting selectively with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids [goid 16018] [pmid 9747881] [evidence TAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CYP-33; MGC3736; MGC111222	CYP-33; MGC3736; MGC111222
Homo sapiens	RefSeq	XM_926258.1	ILMN_32284	LOC653157	XM_926258.1	XM_926258.1		653157	89060277	XM_926258.1	LOC653157	XP_931351.1	ILMN_1665332	0004050132	S	525	AGAAACCACTGAGGGTGTGCTGTTGGGTCCTTCAGCTCCTCGGGTGGTAG	X	+	148415560-148415609		PREDICTED: Homo sapiens similar to Iduronate 2-sulfatase precursor (Alpha-L-iduronate sulfate sulfatase) (Idursulfase) (LOC653157), mRNA.					
Homo sapiens	Unigene	Hs.583661	ILMN_135842	HS.583661	Hs.583661		Hs.583661		865966	H03033			ILMN_1842435	0005270050	S	34	GCTGGGGCTTCTTTAGTGGGGTGAGGGCAGTGGTCATCTTTCTCTGTCGA	8	+	102203571-102203606:102206384-102206397		yj46a12.r1 Soares placenta Nb2HP Homo sapiens cDNA clone IMAGE:151774 5, mRNA sequence					
Homo sapiens	RefSeq	NM_003443.1	ILMN_23973	ZBTB17	NM_003443.1	NM_003443.1		7709	4507996	NM_003443.1	ZBTB17	NP_003434.1	ILMN_1711048	0004880397	S	2264	CTCACATCCTCTACGCCTGTGACTCCTGTGGGGACAAGTTTCTGGATGCC	1	-	16141275-16141324	1p36.13f	Homo sapiens zinc finger and BTB domain containing 17 (ZBTB17), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 12244100] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12244100] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9308237] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244100] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF60; pHZ-67; ZNF151; MIZ-1	ZNF60; pHZ-67; ZNF151; MIZ-1
Homo sapiens	RefSeq	NM_173343.1	ILMN_6394	IL1R2	NM_173343.1	NM_173343.1		7850	27894333	NM_173343.1	IL1R2	NP_775465.1	ILMN_2251766	0003990040	I	1	GGGATGGGAGATACTGTTGTGGTCACCTCTGGAAAATACATTCTGCTACT	2	+	101981891-101981940	2q11.2e	Homo sapiens interleukin 1 receptor, type II (IL1R2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8898719] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4910] [evidence IEA]	IL1RB; CD121b; MGC47725	IL1RB; CD121b; MGC47725
Homo sapiens	RefSeq	NM_173343.1	ILMN_6394	IL1R2	NM_173343.1	NM_173343.1		7850	27894333	NM_173343.1	IL1R2	NP_775465.1	ILMN_1772131	0001740451	A	1231	GGGCATTGTGCTGGCCCCACTTTCACTGGCCTTCTTGGTTTTGGGGGGAA	2	+	102011139-102011188	2q11.2e	Homo sapiens interleukin 1 receptor, type II (IL1R2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8898719] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4910] [evidence IEA]	IL1RB; CD121b; MGC47725	IL1RB; CD121b; MGC47725
Homo sapiens	RefSeq	XR_039901.1	ILMN_348348	LOC644353	XR_039901.1	XR_039901.1		644353	169217182	XR_039901.1	LOC644353		ILMN_3214625	0006110382	A	1195	GCTTCTGAGCCACAGTAAGGATCTAGTCCAGCCCTAAATGAGTCCTTGAC				Xq22.2b	PREDICTED: Homo sapiens misc_RNA (LOC644353), miscRNA.					
Homo sapiens	RefSeq	NM_001018004.1	ILMN_8136	TPM1	NM_001018004.1	NM_001018004.1		7168	63252895	NM_001018004.1	TPM1	NP_001018004.1	ILMN_2360710	0005560246	A	890	GGAGGCTGAGACTCGGGCTGAGTTTGCGGAGAGGTCAGTAACTAAATTGG	15	+	61141526-61141529:61141828-61141873	15q22.2b	Homo sapiens tropomyosin 1 (alpha) (TPM1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 16130169] [evidence TAS]; A form of the tropomyosin dimer found associated with actin and the troponin complex in muscle thin filaments [goid 5862] [pmid 8205619] [evidence TAS]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IEA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [pmid 16754800] [evidence TAS]; A two-stranded helical polymer of the protein actin [goid 31941] [evidence IEA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 16130169] [evidence TAS]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [pmid 3336363] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 8205619] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8205619] [evidence TAS]	TPM1-alpha; TMSA; HTM-alpha; TPM1-kappa; C15orf13	TPM1-alpha; HTM-alpha; TPM1-kappa; TMSA; C15orf13
Homo sapiens	RefSeq	XM_001726202.1	ILMN_343410	LOC100134624	XM_001726202.1	XM_001726202.1		100134624	169170635	XM_001726202.1	LOC100134624	XP_001726254.1	ILMN_3242428	0006650315	S	10468	GCTGGTCGCTGCACCCACTAACTCGTCATCTAGCATTAGGTATATCTCCC	7	-	127321176-127321225		PREDICTED: Homo sapiens similar to MGC27345 protein (LOC100134624), mRNA.					
Homo sapiens	RefSeq	NM_130899.1	ILMN_11720	FAM71B	NM_130899.1	NM_130899.1		153745	18702326	NM_130899.1	FAM71B	NP_570969.1	ILMN_3243991	0006220605	S	1799	CGGTGGAGAAGCAAAACATAGAGGCCAAAGTGGAGAAAGCCCAGGGTGGC	5	-	156522104-156522153	5q33.3a	Homo sapiens family with sequence similarity 71, member B (FAM71B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC26988	MGC26988
Homo sapiens	RefSeq	NM_024701.2	ILMN_16322	ASB13	NM_024701.2	NM_024701.2		79754	22208956	NM_024701.2	ASB13	NP_078977.2	ILMN_1654385	0005050575	S	2463	CTTCATGCTGGCCGCCGTGAGGTTTTACTCCAGCGTTCCCGCCATTGTCA	10	-	5721023-5721072	10p15.1b	Homo sapiens ankyrin repeat and SOCS box-containing 13 (ASB13), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]	FLJ13134; MGC19879	FLJ13134; MGC19879
Homo sapiens	RefSeq	XM_941046.1	ILMN_32957	LOC148709	NR_002929.1	NR_002929.1		148709	89886420	NR_002929.1	LOC148709		ILMN_1680580	0007050767	A	1277	TCACCTTCCCTGAGCGCAAGTCCTTGTGTGGATTGGCAGCACCATCCTGG	1	+	201109948-201109997	1q32.1d	Homo sapiens actin pseudogene (LOC148709), non-coding RNA.					
Homo sapiens	RefSeq	NM_152595.3	ILMN_6577	PGBD4	NM_152595.3	NM_152595.3		161779	57242790	NM_152595.3	PGBD4	NP_689808.2	ILMN_1651690	0001690289	S	3527	GCTGAGATACCCAATCAAGAGCCAATCCTTGCTTCCCTAGACTCTCCTCA	15	+	32185553-32185602	15q14a	Homo sapiens piggyBac transposable element derived 4 (PGBD4), mRNA.				FLJ32638; FLJ37497	FLJ32638; FLJ37497
Homo sapiens	RefSeq	XM_059482.7	ILMN_46180	SNED1	XM_940984.2	XM_940984.2		25992	113414345	XM_940984.2	SNED1	XP_946077.2	ILMN_1706945	0004780730	A	5616	TTTCACCTGTACTCCCGAGCTGTTCCCCAGGCTCCAGACCCACTTGAGAG				2q37.3f	PREDICTED: Homo sapiens sushi, nidogen and EGF-like domains 1 (SNED1), mRNA.		The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	NM_014310.3	ILMN_21994	RASD2	NM_014310.3	NM_014310.3		23551	22027485	NM_014310.3	RASD2	NP_055125.2	ILMN_2170209	0000010397	S	2903	TCTCACCCAGGCACAGCCCCGCCACCATGGATCTCCGTGTACACTATCAA	22	+	34279922-34279971	22q12.3c	Homo sapiens RASD family, member 2 (RASD2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 11976265] [evidence IC ]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 11976265] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Rhes; MGC:4834; TEM2	Rhes; MGC:4834; TEM2
Homo sapiens	RefSeq	NM_012363.1	ILMN_15786	OR1N1	NM_012363.1	NM_012363.1		138883	46048142	NM_012363.1	OR1N1	NP_036495.1	ILMN_1739138	0000380161	S	747	CTATGGGACCCTCTTCAGTGCCTACCTGTGTCCTCCCTCCATTGCCTCTG	9	-	125288776-125288825	9q33.2b	Homo sapiens olfactory receptor, family 1, subfamily N, member 1 (OR1N1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-26; OR9-22; OR1N3	OR1-26; OR9-22; OR1N3
Homo sapiens	RefSeq	XM_928505.1	ILMN_45408	LOC645476	XM_928505.1	XM_928505.1		645476	88997840	XM_928505.1	LOC645476	XP_933598.1	ILMN_1660972	0004570112	S	121	AACTTGGACGGCTGCAGCCCTGCCCAGGACAGTGGGGATCCTGCCTGCTC	6	-	141623536-141623585		PREDICTED: Homo sapiens hypothetical protein LOC645476 (LOC645476), mRNA.					
Homo sapiens	RefSeq	NM_003950.1	ILMN_138142	F2RL3	NM_003950.1	NM_003950.1		9002	4503638	NM_003950.1	F2RL3	NP_003941.1	ILMN_1707127	0007160154	S	4702	CTTTCTCCCCCAAAGAAACCCCATCGCCATCAGCACTCACTCCCCACTCC	19	+	16870380-16870429	19p13.11e	Homo sapiens coagulation factor II (thrombin) receptor-like 3 (F2RL3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1851174] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10477691] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9618465] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9618465] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9618465] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10702240] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 9618465] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 10500152] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 9618465] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with thrombin to initiate a change in cell activity [goid 15057] [pmid 10500152] [evidence TAS]	PAR4	PAR4
Homo sapiens	RefSeq	XR_038079.1	ILMN_345769	LOC100128870	XR_038079.1	XR_038079.1		100128870	169165313	XR_038079.1	LOC100128870		ILMN_3265356	0003360142	M	1362	ATGCACATGGTGTGAACCAACAGCCATATACTATCCTGCTAACTGTGGCC	3	-	176875605-176875654	3q26.31d	PREDICTED: Homo sapiens misc_RNA (LOC100128870), miscRNA.					
Homo sapiens	Unigene	Hs.4892	ILMN_70822	HS.4892	Hs.4892		Hs.4892		4406673	AF131834			ILMN_1849494	0003420356	S	1612	GCCCATATCTCGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGC	2	+	25235178-25235227		Homo sapiens clone 24841 mRNA sequence					
Homo sapiens	RefSeq	NM_020851.1	ILMN_19345	ISLR2	NM_020851.1	NM_020851.1		57611	39930400	NM_020851.1	ISLR2	NP_065902.1	ILMN_1692739	0007400184	S	3845	AATCGTGTTTGCCCGGCGTGTAGTCCCTGACAAGCGTGCCCTGTAGGAGA	15	+	72215857-72215906	15q24.1b	Homo sapiens immunoglobulin superfamily containing leucine-rich repeat 2 (ISLR2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1465	KIAA1465
Homo sapiens	Unigene	Hs.575603	ILMN_127784	HS.575603	Hs.575603		Hs.575603		27784261	CB045974			ILMN_1862963	0006660551	S	315	TGCTCTTGGACGACCCAGGACATAGGCCAGCCAGTACTTACCCCAGTGTG	1	+	777234-777283		NISC_gf01f08.y1 NCI_CGAP_Kid12 Homo sapiens cDNA clone IMAGE:3252614 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001725135.1	ILMN_351036	LOC100133815	XM_001725135.1	XM_001725135.1		100133815	169203359	XM_001725135.1	LOC100133815	XP_001725187.1	ILMN_3248152	0000770446	S	764	TGTGTGCTAGACCTGCTAGGACCTTCTCCATTGACAAATCAGTGAGTGTG					PREDICTED: Homo sapiens similar to seven transmembrane helix receptor (LOC100133815), mRNA.					
Homo sapiens	Unigene	Hs.148257	ILMN_78646	HS.148257	Hs.148257		Hs.148257		27844388	BX100265			ILMN_1862939	0004810554	S	573	GGATATGGGGCTAGATATGTCCCGAACCTCAGCTCGTCCTTTCTTCCCCG	11	-	68978464-68978513		BX100265 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998P113813, mRNA sequence					
Homo sapiens	RefSeq	NM_014758.1	ILMN_11205	SNX19	NM_014758.1	NM_014758.1		399979	7662025	NM_014758.1	SNX19	NP_055573.1	ILMN_1788211	0000360673	S	5516	CCACGTACCCCAAAAAGATAAGCTGTCCTCAGATCCTCCTTCTACCCAGG	11	-	130251468-130251517	11q24.3c	Homo sapiens sorting nexin 19 (SNX19), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16273344] [evidence IPI]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	CHET8; DKFZp667I205; KIAA0254	KIAA0254; CHET8; DKFZp667I205
Homo sapiens	RefSeq	NM_000898.3	ILMN_177763	MAOB	NM_000898.3	NM_000898.3		4129	38202206	NM_000898.3	MAOB	NP_000889.3	ILMN_1727360	0004060433	S	2209	CTAAGAGCCACAATAAGCCACTGGTATCTGGGGGACTAGAACACAAATCC	X	-	43511097-43511146	Xp11.3c	Homo sapiens monoamine oxidase B (MAOB), nuclear gene encoding mitochondrial protein, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [pmid 7063850] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8602220] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC26382	MGC26382
Homo sapiens	RefSeq	NM_018207.1	ILMN_4460	TRIM62	NM_018207.1	NM_018207.1		55223	8922647	NM_018207.1	TRIM62	NP_060677.1	ILMN_1666852	0006900553	S	3103	CTGCCCAGAGGTGGGAACTGGAGGAGTGGGCTGCAAGACTGAGCCTAAAT	1	-	33383874-33383923	1p35.1a	Homo sapiens tripartite motif-containing 62 (TRIM62), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ16558; FLJ10759	FLJ16558; FLJ10759
Homo sapiens	RefSeq	NM_153219.2	ILMN_183992	ZNF524	NM_153219.2	NM_153219.2		147807	44921601	NM_153219.2	ZNF524	NP_694951.1	ILMN_1810147	0005490563	S	970	TTTCCGGTGGTCTTCCCGTTGTGGGAGCAGGTGGAGGGTGGAGACCTAAA	19	+	56114365-56114414	19q13.42c	Homo sapiens zinc finger protein 524 (ZNF524), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC23143	MGC23143
Homo sapiens	RefSeq	NM_022101.2	ILMN_7821	CXORF56	NM_022101.2	NM_022101.2		63932	34147219	NM_022101.2	CXorf56	NP_071384.1	ILMN_1730630	0004610541	S	609	AGCTGGAGCGCAAAGGCATGAGCAAGAGGCGACTGCAAGAGCTGGCTGAA	X	-	118673746-118673752:118675291-118675333	Xq24c	Homo sapiens chromosome X open reading frame 56 (CXorf56), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ22965	FLJ22965
Homo sapiens	RefSeq	XM_936694.1	ILMN_35236	BMP2KL	XM_936694.1	XM_936694.1		347359	89060869	XM_936694.1	BMP2KL	XP_941787.1	ILMN_1707469	0005690133	A	885	TGGTGCCGCAGTGACTGATGGGAACGATAGGGGGAACGTCTTACAACTCG				Xq13.2c	PREDICTED: Homo sapiens BMP2 inducible kinase-like (BMP2KL), mRNA.					
Homo sapiens	RefSeq	XM_928310.1	ILMN_39432	LOC653262	XM_928310.1	XM_928310.1		653262	89036852	XM_928310.1	LOC653262	XP_933403.1	ILMN_1663603	0006560626	S	181	CAGAGTTTGAGTTGTGCAACTGTTCAGCCAAGCCTACAAGATGTATAGTG	13	-	112890659-112890661:112890662-112890708		PREDICTED: Homo sapiens similar to hypothetical protein FLJ11305 (LOC653262), mRNA.					
Homo sapiens	RefSeq	XM_944499.1	ILMN_42036	LOC651091	XM_944499.2	XM_944499.2		651091	113416795	XM_944499.2	LOC651091	XP_949592.2	ILMN_1755181	0007380600	S	498	GAGGGCCACAGCATTGCCCACAGACCCTCCCTATCCTAAACCTGCTCAGT	5	-	149501601-149501637:149503144-149503156	5q33.1c	PREDICTED: Homo sapiens hypothetical LOC651091 (LOC651091), mRNA.					
Homo sapiens	RefSeq	NM_001005496.1	ILMN_168082	OR5D16	NM_001005496.1	NM_001005496.1		390144	53828709	NM_001005496.1	OR5D16	NP_001005496.1	ILMN_2082903	0002070538	S	661	GCATTCATCATTGTCACCACCTTGAAGATGCCTTCAGCCAGTGGGCACCG	11	+	55363464-55363513	11q11c	Homo sapiens olfactory receptor, family 5, subfamily D, member 16 (OR5D16), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-154	OR11-154
Homo sapiens	RefSeq	NM_000356.2	ILMN_18418	TCOF1	NM_000356.2	NM_000356.2		6949	57164974	NM_000356.2	TCOF1	NP_000347.2	ILMN_1744941	0003130435	I	3034	AAGAAGAACCCAGCTTCCCTCCCACTGACCCAGGCTGCCCTGAAGGTCCT	5	+	149751306-149751355	5q33.1c	Homo sapiens Treacher Collins-Franceschetti syndrome 1 (TCOF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 15249688] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9096354] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The synthesis of the large ribosomal RNA (rRNA) transcript which encodes several rRNAs, e.g. in mammals 28S, 18S and 5.8S, from a nuclear DNA template [goid 42790] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9096354] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MFD1; treacle	MFD1; treacle
Homo sapiens	RefSeq	NM_057161.2	ILMN_6711	KLHDC3	NM_057161.2	NM_057161.2		116138	17149812	NM_057161.2	KLHDC3	NP_476502.1	ILMN_1730940	0004250372	S	1781	GTGGGGACCAGCAGATAAATCCCACCCTTCCTTGAGCTGTCGCTGTACTC	6	+	42988934-42988983	6p21.1d	Homo sapiens kelch domain containing 3 (KLHDC3), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome in the nucleus [goid 790] [pmid 12606021] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12606021] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 12606021] [evidence NAS]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 12606021] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12482870] [evidence IPI]	RP1-20C7.3; hPEAS; hPeas; dJ20C7.3; PEAS	RP1-20C7.3; hPEAS; hPeas; dJ20C7.3; PEAS
Homo sapiens	RefSeq	XM_001727027.1	ILMN_344798	LOC399940	XM_001727027.1	XM_001727027.1		399940	169202731	XM_001727027.1	LOC399940	XP_001727079.1	ILMN_3210549	0000150215	A	1085	GGAAAGAGGAGACAGAATGACAAGATAGATGGAGAGGAGGGACTCTTTCT				11q14.3b	PREDICTED: Homo sapiens similar to tripartite motif-containing 51 (LOC399940), mRNA.					
Homo sapiens	RefSeq	XM_172801.4	ILMN_307768	KIAA1210	NM_020721.1	NM_020721.1		57481	154090978	NM_020721.1	KIAA1210	NP_065772.1	ILMN_1732962	0000870025	A	7460	GATGCCCTTTATCTGGGTACTCCTGGTAGATTAGCTGTTACACCTCCCTT	X	-	118212912-118212961	Xq24b	Homo sapiens KIAA1210 (KIAA1210), mRNA.				RP13-347D8.3	
Homo sapiens	RefSeq	NM_000666.1	ILMN_17094	ACY1	NM_000666.1	NM_000666.1		95	4501900	NM_000666.1	ACY1	NP_000657.1	ILMN_1683883	0001400341	S	1033	GGCAGCTTTTAGCCGGGTCTGCAAGGATATGAACCTCACTCTGGAGCCTG	3	+	51997630-51997659:51997822-51997841	3p21.1e	Homo sapiens aminoacylase 1 (ACY1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8394326] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]	Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [pmid 1707030] [evidence TAS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	ACY1D; ACYLASE	ACY1D; ACYLASE
Homo sapiens	RefSeq	NM_013937.2	ILMN_1212	OR11A1	NM_013937.2	NM_013937.2		26531	27754165	NM_013937.2	OR11A1	NP_039225.1	ILMN_1785930	0002030707	S	1336	CCTCCTCCCAACCTCCACCCTCAAGTAGGATTCAGTGTGTTGTTCCCCTC	6	-	29502103-29502152	6p22.1a	Homo sapiens olfactory receptor, family 11, subfamily A, member 1 (OR11A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	dJ994E9.6; hs6M1-18; OR11A2	dJ994E9.6; hs6M1-18; OR11A2
Homo sapiens	RefSeq	XM_940593.1	ILMN_40472	LOC339778	XM_496547.3	XM_496547.3		339778	113412920	XM_496547.3	LOC339778	XP_496547.2	ILMN_1740463	0000070446	A	2568	TGGCACACTGCATAACACCAGTCCCATCCTCACCCCTAGGCCTCCTCTGT	2	+	26655627-26655676	2p23.3b	PREDICTED: Homo sapiens hypothetical protein LOC339778 (LOC339778), mRNA.					
Homo sapiens	RefSeq	XM_926658.1	ILMN_40382	LOC643320	XM_926658.1	XM_926658.1		643320	89030767	XM_926658.1	LOC643320	XP_931751.1	ILMN_1809465	0007200750	S	292	GCAGGAACAGTGCAGATTCCCACATCTACAGCTCAGCACCCACTGCAGGA	10	+	3284161-3284210		PREDICTED: Homo sapiens hypothetical protein LOC643320 (LOC643320), mRNA.					
Homo sapiens	RefSeq	NM_173649.1	ILMN_505	C2ORF61	NM_173649.1	NM_173649.1		285051	27735114	NM_173649.1	C2orf61	NP_775920.1	ILMN_1790070	0001190192	S	1953	GGAGGGACGAGTGGAAAAACTTTGTCTTCTGGCTTGGGTGCCAGCTTAGC	2	-	47209136-47209185	2p21a	Homo sapiens chromosome 2 open reading frame 61 (C2orf61), mRNA.				FLJ40172	FLJ40172
Homo sapiens	RefSeq	NM_181599.1	ILMN_8069	KRTAP13-1	NM_181599.1	NM_181599.1		140258	31791007	NM_181599.1	KRTAP13-1	NP_853630.1	ILMN_1791951	0004900739	S	41	CTGAACTCACATCTCCCATCAACATGTCCTACAACTGCTGCTCTGGAAAC	21	+	30690253-30690302	21q22.11a	Homo sapiens keratin associated protein 13-1 (KRTAP13-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP13.1	KAP13.1
Homo sapiens	RefSeq	NR_029698.1	ILMN_387886	MIR134	NR_029698.1	NR_029698.1		406924	262205386	NR_029698.1	MIR134		ILMN_3308043	0007610400	S	1	AGGGTGTGTGACTGGTTGACCAGAGGGGCATGCACTGTGTTCACCCTGTG				14q32.31a	Homo sapiens microRNA 134 (MIR134), microRNA.					
Homo sapiens	RefSeq	NM_016565.2	ILMN_2739	CHCHD8	NM_016565.2	NM_016565.2		51287	46198303	NM_016565.2	CHCHD8	NP_057649.2	ILMN_1732750	0004120025	S	362	ACCACTGAGACCCCAAACCACCTATCCCCAGTAGATGGCCCTGCCAAGAC	11	-	73584117-73584159:73584160-73584166	11q13.4b	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 8 (CHCHD8), mRNA.				DKFZp762H1711; E2IG2; MGC117206	DKFZp762H1711; E2IG2; MGC117206
Homo sapiens	RefSeq	XM_946035.1	ILMN_35484	LOC650687	XM_946035.1	XM_946035.1		650687	89042920	XM_946035.1	LOC650687	XP_951128.1	ILMN_1760579	0003290129	S	1072	GCAGACAGCAAAAAAGGCAACCAGGCAAAGTCCCTATCGCCCAACCTACC					PREDICTED: Homo sapiens hypothetical protein LOC650687 (LOC650687), mRNA.					
Homo sapiens	RefSeq	XM_942784.1	ILMN_41634	LOC643783	XM_931798.2	XM_931798.2		643783	113415595	XM_931798.2	LOC643783	XP_936891.1	ILMN_1664969	0002100048	S	227	ATAAGGCTTAGAGGATCAAGGATCCTGCCCAGATGACTTACCGAAATGTT	4	+	53221825-53221860:53221861-53221874	4q12a	PREDICTED: Homo sapiens hypothetical LOC643783 (LOC643783), mRNA.					
Homo sapiens	RefSeq	NM_004930.2	ILMN_31774	CAPZB	NM_004930.2	NM_004930.2		832	89276749	NM_004930.2	CAPZB	NP_004921.1	ILMN_2053921	0004670167	S	1303	CTTATTCCGTGTGTGTTTGGGAGTTGCTTGGGGTTGGGGGTCGTGGGGAC	1	-	19538137-19538186	1p36.13b-p36.13a	Homo sapiens capping protein (actin filament) muscle Z-line, beta (CAPZB), mRNA.	A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [pmid 7665558] [evidence TAS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 16130169] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 7665558] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CAPB; MGC104401; MGC129749; MGC129750; CAPZ; CAPPB	CAPB; MGC104401; MGC129749; MGC129750; CAPZ; CAPPB
Homo sapiens	RefSeq	XM_931774.1	ILMN_42320	LOC643749	XM_931774.1	XM_931774.1		643749	88997678	XM_931774.1	LOC643749	XP_936867.1	ILMN_1815804	0003840286	S	333	GCGGGCTTCGGCCTATAAAAGGGCCGCCCTGGCGTTCCCCCTTCCCGAAC	6	+	111911752-111911801	6q21h	PREDICTED: Homo sapiens hypothetical protein LOC643749 (LOC643749), mRNA.					
Homo sapiens	RefSeq	NM_181684.2	ILMN_9021	KRTAP12-2	NM_181684.2	NM_181684.2		353323	48717493	NM_181684.2	KRTAP12-2	NP_859012.1	ILMN_1697704	0004830110	S	242	CATGAGCTTCAAGTCAGCTGTGTGCGTGCCCGTGAGCTGCCAGTCTTCTG	21	-	46086553-46086602	21q22.3d	Homo sapiens keratin associated protein 12-2 (KRTAP12-2), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KAP12.2; KRTAP12.2	KAP12.2; KRTAP12.2
Homo sapiens	RefSeq	NM_003843.2	ILMN_27887	SCEL	NM_144777.1	NM_144777.1		8796	21536307	NM_144777.1	SCEL	NP_659001.1	ILMN_1710325	0001470731	A	1829	AGCAGGCAGGACCACAGGATACTGTTGTGTACACAAGGACATATGTGGAG	13	+	77106532-77106581	13q22.3b	Homo sapiens sciellin (SCEL), transcript variant 2, mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [pmid 9813070] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11112355] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9813070] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 9813070] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 11112355] [evidence ISS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 11112355] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [pmid 14632196] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14632196] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ21667; MGC22531	FLJ21667; MGC22531
Homo sapiens	RefSeq	NM_001869.1	ILMN_20448	CPA2	NM_001869.1	NM_001869.1		1358	4502998	NM_001869.1	CPA2	NP_001860.1	ILMN_1807503	0001400019	S	1045	AGTGGGACCAATCTGCTCTGTCATCTACCAAGCCAGTGGAGGAAGCATTG	7	+	129709239-129709264:129716636-129716659	7q32.2b	Homo sapiens carboxypeptidase A2 (pancreatic) (CPA2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein in the vacuole, usually by the action of vacuolar proteases [goid 7039] [pmid 2920728] [evidence TAS]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 2920728] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_001721529.1	ILMN_336459	LOC730839	XM_001721529.1	XM_001721529.1		730839	169162259	XM_001721529.1	LOC730839	XP_001721581.1	ILMN_3221821	0002680626	A	1408	TCTAGCTCAGGGCATTCCTCTGGTTACACTCAGCATGGATCTGGCTCAGG					PREDICTED: Homo sapiens similar to hornerin (LOC730839), mRNA.					
Homo sapiens	RefSeq	XM_001721529.1	ILMN_336459	LOC730839	XM_001721529.1	XM_001721529.1		730839	169162259	XM_001721529.1	LOC730839	XP_001721581.1	ILMN_3298355	0004290202	M	67	GGGGAGTATGATACGTTGAACAAGGCAGAGCTGAAAGAACTTCTGGAAAA					PREDICTED: Homo sapiens similar to hornerin (LOC730839), mRNA.					
Homo sapiens	RefSeq	XM_930684.1	ILMN_42168	LOC653071	XM_930684.1	XM_930684.1		653071	88978552	XM_930684.1	LOC653071	XP_935777.1	ILMN_1755514	0000520592	I	1973	GGGAGACCAGAAGTGGGGGGAAGAGAAGGGATGACTGTTTCTTTGTTTTC	4	-	67224-67273		PREDICTED: Homo sapiens similar to CG32820-PA, isoform A, transcript variant 4 (LOC653071), mRNA.					
Homo sapiens	RefSeq	NM_153611.3	ILMN_28843	CYBASC3	NM_153611.3	NM_153611.3		220002	48976062	NM_153611.3	CYBASC3	NP_705839.2	ILMN_2129505	0006940152	S	2579	GGTGGAGAGCGGGAAGGGTCTTGCTCCTAAGTGTTGCTGCTGTGGCTTTT	11	-	60873183-60873232	11q12.2b	Homo sapiens cytochrome b, ascorbate dependent 3 (CYBASC3), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC20446	MGC20446
Homo sapiens	RefSeq	XM_941934.1	ILMN_35836	LOC652476	XM_941934.1	XM_941934.1		652476	89071533	XM_941934.1	LOC652476	XP_947027.1	ILMN_1717423	0000940053	S	72	TTGGAAAGTCACCTTGGGAGCCAGTGATCCAGGGCAGCTGTGCCTGAAAG					PREDICTED: Homo sapiens similar to chromosome 9 open reading frame 79 (LOC652476), mRNA.					
Homo sapiens	RefSeq	NM_032647.2	ILMN_7088	CBX2	NM_032647.2	NM_032647.2		84733	32306516	NM_032647.2	CBX2	NP_116036.1	ILMN_1686237	0006400408	A	282	AAGGAAGCTCACTGCCATGTCCTCCTGCAGCCGGCGCTCCAAGCTCAAGG	17	+	75370147-75370196	17q25.3d	Homo sapiens chromobox homolog 2 (Pc class homolog, Drosophila) (CBX2), transcript variant 2, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence NAS]	M33; CDCA6; MGC10561	M33; CDCA6; MGC10561
Homo sapiens	RefSeq	NM_032647.2	ILMN_7088	CBX2	NM_032647.2	NM_032647.2		84733	32306516	NM_032647.2	CBX2	NP_116036.1	ILMN_1709645	0003180537	I	636	GTCCTTGGGGGACGGAAAGGAACAGGAAGCATGCGTACAGTAGGTGCTCA	17	+	75370501-75370543:75370544-75370550	17q25.3d	Homo sapiens chromobox homolog 2 (Pc class homolog, Drosophila) (CBX2), transcript variant 2, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence NAS]	M33; CDCA6; MGC10561	M33; CDCA6; MGC10561
Homo sapiens	RefSeq	NM_003452.2	ILMN_4798	ZNF189	NM_003452.2	NM_003452.2		7743	37693524	NM_003452.2	ZNF189	NP_003443.2	ILMN_1806809	0000630603	A	2900	GTCCTATGTGAATGAGCTTATCCCTCCACAACCAGGTGCATATGAAAGTG	9	+	103212495-103212544	9q31.1b	Homo sapiens zinc finger protein 189 (ZNF189), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9653648] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9653648] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XR_018338.2	ILMN_175110	LOC649076	XR_018338.2	XR_018338.2		649076	169216341	XR_018338.2	LOC649076		ILMN_3238818	0003850762	S	825	TGGTCTGAAGGTGTGCGGGTGCCCTCTGTGCCTATTCAGCAGTTCCCTGT					PREDICTED: Homo sapiens misc_RNA (LOC649076), miscRNA.					
Homo sapiens	RefSeq	NM_031215.1	ILMN_28000	CABLES2	NM_031215.2	NM_031215.2		81928	145275194	NM_031215.2	CABLES2	NP_112492.2	ILMN_1762407	0002070403	S	3571	TCTCTAGAACACATCCAGGTGTCGGAGCTAAGGTGTTCAGCTCGGCTGTG	20	-	60963850-60963899	20q13.33c	Homo sapiens Cdk5 and Abl enzyme substrate 2 (CABLES2), mRNA.		Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells [goid 51302] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]	C20orf150; ik3-2; dJ908M14.2	C20orf150; ik3-2; dJ908M14.2
Homo sapiens	RefSeq	NM_018238.2	ILMN_23868	AGK	NM_018238.2	NM_018238.2		55750	21359926	NM_018238.2	AGK	NP_060708.1	ILMN_1772645	0007560452	S	2000	CTGCCCTTCCCAGGTGATTCTGTAAGTTGTCCCTCAACTGTACTTGGAGA	7	+	140999899-140999948	7q34d-q34e	Homo sapiens acylglycerol kinase (AGK), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The process of introducing one or more phosphate groups into a lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents [goid 46834] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + ceramide = ADP + ceramide 1-phosphate [goid 1729] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + acylglycerol = ADP + acyl-sn-glycerol 3-phosphate [goid 47620] [evidence IEA]	MULK; FLJ10842	MULK; FLJ10842
Homo sapiens	RefSeq	NM_016232.4	ILMN_763	IL1RL1	NM_016232.4	NM_016232.4		9173	27894323	NM_016232.4	IL1RL1	NP_057316.3	ILMN_1697444	0003390497	I	1979	GCTTTCCTGACTTCTCCTAGCTGGCTTATGCCCCTGCACTGAAGTGTGAG	2	+	102334850-102334899	2q12.1a	Homo sapiens interleukin 1 receptor-like 1 (IL1RL1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1482686] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA];  [goid 5057] [pmid 1482686] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286016] [evidence IPI]	FIT-1; DER4; T1; MGC32623; ST2L; ST2; ST2V	FIT-1; DER4; T1; MGC32623; ST2L; ST2; ST2V
Homo sapiens	RefSeq	XM_932634.1	ILMN_43484	LOC653252	XM_932634.1	XM_932634.1		653252	89031215	XM_932634.1	LOC653252	XP_937727.1	ILMN_1719735	0001240326	I	748	GCTGAATTTTTAAAATCTTTTGGACACTGCACACTCTCCTTTCCAAGCAC	10	+	51054572-51054621	10q11.23a	PREDICTED: Homo sapiens similar to Mitochondrial import inner membrane translocase subunit Tim23, transcript variant 5 (LOC653252), mRNA.					
Homo sapiens	RefSeq	XM_928299.1	ILMN_34712	LOC643373	XM_928299.1	XM_928299.1		643373	88983752	XM_928299.1	LOC643373	XP_933392.1	ILMN_1761301	0004920022	I	12	TCTCTCGGTATCCTCACATGGTAGGGAGAAAAGCAGCTCTAGTGTCTCTT	5	-	68988380-68988429	5p13.3a	PREDICTED: Homo sapiens region containing hypothetical protein LOC153561; SMA4, transcript variant 1 (LOC643373), mRNA.					
Homo sapiens	RefSeq	XM_932282.1	ILMN_40207	LOC643171	XM_932282.1	XM_932282.1		643171	89036871	XM_932282.1	LOC643171	XP_937375.1	ILMN_1748666	0003120082	I	237	CCAACCTCTGTCACCACATCCCTCTTCCCTGTTGTCACACCTGTCACTTG	13	-	100902-100951		PREDICTED: Homo sapiens similar to gamma-glutamyltransferase 2, transcript variant 6 (LOC643171), mRNA.					
Homo sapiens	RefSeq	XM_001721859.1	ILMN_345493	GAFA1	XM_001721859.1	XM_001721859.1		100131227	169207548	XM_001721859.1	GAFA1	XP_001721911.1	ILMN_3211339	0001450465	A	14	CCTGGATTCATCTGTATGTAATGGCTTCTGCCATGTCCTCTTCACCTATC				14q11.2b	PREDICTED: Homo sapiens FGF2-associated protein GAFA1 (GAFA1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.571622	ILMN_123803	HS.571622	Hs.571622		Hs.571622		6504543	AW205071			ILMN_1915345	0004210440	S	303	AGGAGGATGGAAAGACTGGGGGTGCCCATCTCCCCTCCTCTGCCCGCCTC	9	+	44987133-44987167:45667267-45667281		UI-H-BI1-aem-a-04-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2719758 3, mRNA sequence					
Homo sapiens	RefSeq	NM_018987.1	ILMN_17496	SEMA5B	NM_018987.1	NM_018987.1		54437	39930366	NM_018987.1	SEMA5B	NP_061860.1	ILMN_1736300	0004180435	I	3318	TCCCAGCCCTCCAGCACCCCACTCCAAAGTCTGGACTCTTTCCACATCCT	3	-	124112942-124112991	3q21.1b	Homo sapiens sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B (SEMA5B), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SEMAG; KIAA1445; FLJ10372; SemG	SEMAG; KIAA1445; FLJ10372; SemG
Homo sapiens	RefSeq	NM_003638.1	ILMN_162670	ITGA8	NM_003638.1	NM_003638.1		8516	49170033	NM_003638.1	ITGA8	NP_003629.1	ILMN_1660306	0005720075	S	3133	CCTCAGGAGGACATGACCGACAGGGAACAGCTGACAAATGACAAGACCCC	10	-	15686355-15686360:15687729-15687772	10p13b	Homo sapiens integrin, alpha 8 (ITGA8), mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 7768999] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IEA]	The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 7768999] [evidence NAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 7768999] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_002734.3	ILMN_26481	PRKAR1A	NM_212472.1	NM_212472.1		5573	47132582	NM_212472.1	PRKAR1A	NP_997637.1	ILMN_1738632	0000130368	A	2821	GTGCAACTAACTGACTCTGTTATTGATCCCTTCTCCTGCCCTTTCCCAGG	17	+	64039676-64039725	17q24.2c	Homo sapiens protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) (PRKAR1A), transcript variant 3, mRNA.	The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]	The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1832337] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15655353] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [pmid 3426618] [evidence TAS]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]	CAR; PPNAD1; MGC17251; TSE1; CNC; CNC1; PKR1; PRKAR1; DKFZp779L0468	CAR; PPNAD1; MGC17251; TSE1; CNC; CNC1; PKR1; PRKAR1; DKFZp779L0468
Homo sapiens	RefSeq	NM_020371.2	ILMN_14289	AVEN	NM_020371.2	NM_020371.2		57099	56699476	NM_020371.2	AVEN	NP_065104.1	ILMN_1710216	0003800634	S	1087	CCTCCAAAAATGTTACCGAGGAAGAGCTGGAAGACTGGTTGGACAGCATG	15	-	34158822-34158871	15q14a	Homo sapiens apoptosis, caspase activation inhibitor (AVEN), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 10949025] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10949025] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10949025] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10949025] [evidence IPI]	PDCD12	PDCD12
Homo sapiens	Unigene	Hs.538951	ILMN_104220	HS.538951	Hs.538951		Hs.538951		1191237	N50071			ILMN_1878882	0001990020	S	216	AGGTGAGGAGAACCAACAAGGGCAAAGACCCAGCTCCAAAAATGGGGTAC	11	+	49115748-49115773:49115776-49115799		yz11a06.s1 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone IMAGE:282706 3, mRNA sequence					
Homo sapiens	RefSeq	NM_058197.2	ILMN_30355	CDKN2A	NM_058197.3	NM_058197.3		1029	98985803	NM_058197.3	CDKN2A	NP_478104.2	ILMN_1757255	0005130671	I	547	CCAAGGAAGAGGAATGAGGAGCCACGCGCGTACAGATCTCTCGAATGCTG	9	-	21974442-21974475:21974476-21974491	9p21.3c	Homo sapiens cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) (CDKN2A), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 17110379] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 17110379] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16243918] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16243918] [evidence IDA]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 12082630] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [pmid 15582998] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12082630] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 12082630] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 15582998] [evidence IMP]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [pmid 12082630] [evidence IMP]; A preprogrammed process that occurs in an organism that is associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components [goid 10149] [pmid 14966292] [evidence IMP]; Any process that modulates the rate or extent of progression from G2 phase to M phase of the mitotic cell cycle [goid 10389] [pmid 15582998] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence ISS]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33088] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 51444] [evidence ISS]; A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [pmid 16243918] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [pmid 10205165] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10208428] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 16243918] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 16243918] [evidence IMP]; A preprogrammed process that occurs in an organism that is associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components [goid 10149] [pmid 14720514] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [pmid 10353611] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 8259215] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [pmid 8259215] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17909018] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15989956] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12740913] [evidence IPI]; Stops, prevents or reduces the activity of a ubiquitin-protein ligase [goid 55105] [evidence ISS]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 8259215] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11278317] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8259215] [evidence IPI]; Interacting selectively with NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters [goid 51059] [pmid 10353611] [evidence IDA]	p14ARF; TP16; p16; CDKN2; MTS1; INK4a; CMM2; MLM; ARF; p16INK4a; INK4; p14; p19; p16INK4; CDK4I	p14ARF; TP16; p16; CDKN2; MTS1; INK4a; CMM2; MLM; ARF; p16INK4a; INK4; p14; p16INK4; p19; CDK4I
Homo sapiens	RefSeq	NM_177998.1	ILMN_16494	OTOP1	NM_177998.1	NM_177998.1		133060	29725634	NM_177998.1	OTOP1	NP_819056.1	ILMN_1758983	0001980128	S	1603	CCAAGCCCAGTCCGCCTTCCCCGTTTCTTACAGGGCAACGCCAAGAGAAA	4	-	4249839-4249888	4p16.2b	Homo sapiens otopetrin 1 (OTOP1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The series of events in which a gravitational stimulus is received by a cell and converted into a molecular signal [goid 9590] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]		MGC163304; MGC163302	MGC163304; MGC163302
Homo sapiens	RefSeq	NM_138632.1	ILMN_138238	HRIHFB2122	NM_138632.1	NM_138632.1		11078	20336762	NM_138632.1	HRIHFB2122	NP_619538.1	ILMN_1809145	0004880332	A	1043	AGTGACGGCCACGAGGCACTGGAGAAGGAGGTTCAGGCTCTTCGGGCCCA	22	+	36484062-36484091:36485107-36485126	22q13.1a	Homo sapiens Tara-like protein (HRIHFB2122), transcript variant 2, mRNA.				KIAA1662; dJ37E16.4	KIAA1662; dJ37E16.4
Homo sapiens	RefSeq	NM_025054.3	ILMN_21709	VCPIP1	NM_025054.3	NM_025054.3		80124	38569451	NM_025054.3	VCPIP1	NP_079330.2	ILMN_1682180	0004040450	S	7946	CGTCCTGAGCCCTTATTATGCCTGTGGTAGAGCAATGCAAGACTGAAAAG	8	-	67705222-67705271	8q13.1b	Homo sapiens valosin containing protein (p97)/p47 complex interacting protein 1 (VCPIP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence ISS]	Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	FLJ23132; KIAA1850; VCIP135; DKFZp686G038	FLJ23132; KIAA1850; VCIP135; DKFZp686G038
Homo sapiens	RefSeq	XR_040865.1	ILMN_344237	FLJ11827	XR_040865.1	XR_040865.1		80163	169165997	XR_040865.1	FLJ11827		ILMN_3187206	0004120092	A	2071	CTTCTGAGCAGGCCATGCTGTCTCTGCTGCTGTCGCTGCTGCTATACCAG				3q23a	PREDICTED: Homo sapiens misc_RNA (FLJ11827), miscRNA.					
Homo sapiens	RefSeq	NM_024529.3	ILMN_166419	CDC73	NM_024529.3	NM_024529.3		79577	40018639	NM_024529.3	CDC73	NP_078805.3	ILMN_1701614	0004120184	S	2506	GGGAGCCAGAGTATGATTTGGGGGAAGAATATGTATCAGCCCTATTGCAG	1	+	191487205-191487254	1q31.2b	Homo sapiens cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (CDC73), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17113272] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16630820] [evidence IPI]	HPT-JT; C1orf28; FLJ23316; HRPT2	HPT-JT; C1orf28; FLJ23316; HRPT2
Homo sapiens	RefSeq	XM_001133420.1	ILMN_176057	LOC728991	XM_001133420.1	XM_001133420.1		728991	113427090	XM_001133420.1	LOC728991	XP_001133420.1	ILMN_3299025	0001300255	M	247	TCTCACTATGTTGCCCAGGCTGGTCTCGGACTCCTGGACTCAAGTGATCC	17	+	76052092-76052141	17q25.3e	PREDICTED: Homo sapiens hypothetical LOC728991 (LOC728991), mRNA.					
Homo sapiens	RefSeq	NM_205834.2	ILMN_15957	LSR	NM_205834.2	NM_205834.2		51599	47777760	NM_205834.2	LSR	NP_991403.1	ILMN_2249677	0006560064	I	942	GGAGGACCTCAGGGGTGGCTGAGCTCTTACCTGGTTTTCAGGCGGGGCCC	19	+	35752828-35752877	19q13.12a	Homo sapiens lipolysis stimulated lipoprotein receptor (LSR), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]	The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence ISS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	MGC48312; LISCH7; MGC48503; MGC10659	MGC48312; LISCH7; MGC48503; MGC10659
Homo sapiens	RefSeq	NM_145197.1	ILMN_18212	LIPT1	NM_015929.2	NM_015929.2		51601	21729874	NM_015929.2	LIPT1	NP_057013.1	ILMN_1717524	0002970088	A	624	GTGAGAGCTCTGAATGCTGTCCAACCCCAGCTGGATGTGCAGGCTACCAA	2	+	99145252-99145301	2q11.2c	Homo sapiens lipoyltransferase 1 (LIPT1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10103005] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10103005] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC13378; MGC12290	MGC13378; MGC12290
Homo sapiens	RefSeq	NM_015929.2	ILMN_18212	LIPT1	NM_015929.2	NM_015929.2		51601	21729874	NM_015929.2	LIPT1	NP_057013.1	ILMN_2343105	0001780161	A	806	GAGCCCTTACCAAGGGATCAGGAGCAATGCCACTGCTAGCATACCTTCCT	2	+	99145434-99145483	2q11.2c	Homo sapiens lipoyltransferase 1 (LIPT1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10103005] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10103005] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC13378; MGC12290	MGC13378; MGC12290
Homo sapiens	Unigene	Hs.582534	ILMN_134715	HS.582534	Hs.582534		Hs.582534		70957643	DR731264			ILMN_1865663	0003440564	S	63	TGATGACATGGATGGTGGGGGGCTATCAGCAGTGACAAGGCTGTCTGCAC	5	-	129124011-129124060		MGC7.2.1.1.1.H04.R.1 NIH_MGC_331 Homo sapiens cDNA clone MGC7.2.1.1.1.H04, mRNA sequence					
Homo sapiens	RefSeq	NM_022896.1	ILMN_30220	LPIN3	NM_022896.1	NM_022896.1		64900	74271887	NM_022896.1	LPIN3	NP_075047.1	ILMN_1772834	0004200315	S	3571	AAGGACAGTCCCAAACTCAGCTGGGGCAGGTGTTGGCCTGAAAGTCCTCC	20	+	39421844-39421893	20q12c	Homo sapiens lipin 3 (LPIN3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			dJ450M14.2; dJ620E11.2; LIPN3L; SMP2; dJ450M14.3	dJ450M14.2; dJ620E11.2; LIPN3L; SMP2; dJ450M14.3
Homo sapiens	RefSeq	NM_031859.1	ILMN_29129	PCDHA10	NM_031859.1	NM_031859.1		56139	14165380	NM_031859.1	PCDHA10	NP_114065.1	ILMN_1682112	0003460433	I	2465	ATCAGAATATTTCATTTTTGTCTACATTCCATTTATGCTTGAATATTTCT	5	+	140218282-140218331	5q31.3b	Homo sapiens protocadherin alpha 10 (PCDHA10), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CNRN8; CNR8; CNRS8; PCDH-ALPHA10; CRNR8	CNRN8; CNR8; CNRS8; PCDH-ALPHA10; CRNR8
Homo sapiens	RefSeq	NM_175053.2	ILMN_1002	KRT74	NM_175053.3	NM_175053.3		121391	148612802	NM_175053.3	KRT74	NP_778223.2	ILMN_1713272	0000940161	S	2558	GGACTGTGGGTATGTGATTTGTCTTCCACAGTCTCTCTGGGGCTGTGTCC	12	-	52959783-52959832	12q13.13d	Homo sapiens keratin 74 (KRT74), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	K6IRS4; KRT6IRS4; KRT5C	K6IRS4; KRT6IRS4; KRT5C
Homo sapiens	RefSeq	NM_144647.3	ILMN_4791	CAPSL	NM_144647.3	NM_144647.3		133690	110835716	NM_144647.3	CAPSL	NP_653248.3	ILMN_2267508	0005960379	I	40	GAGCCAATCAGGCTGTGAATCTGCAGCAGTGATCCCAGGTCCTCCAATTA	5	-	35974549-35974598	5p13.2c	Homo sapiens calcyphosine-like (CAPSL), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC26610	MGC26610
Homo sapiens	RefSeq	NM_144647.2	ILMN_4791	CAPSL	NM_144647.3	NM_144647.3		133690	110835716	NM_144647.3	CAPSL	NP_653248.3	ILMN_1763843	0000620162	S	551	GCAAAACACCACCCAAAGTACCAGAATGGGGAATGGAGTGAGGAACAAGT	5	-	35945776-35945825	5p13.2c	Homo sapiens calcyphosine-like (CAPSL), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC26610	MGC26610
Homo sapiens	RefSeq	NM_144647.3	ILMN_4791	CAPSL	NM_144647.3	NM_144647.3		133690	110835716	NM_144647.3	CAPSL	NP_653248.3	ILMN_2359306	0003710176	A	727	CATGATGAGAACCGCCTGGAAGCTTTAAGCACATGACCTGGGGACCAGGC	5	-	35940381-35940403:35940404-35940430	5p13.2c	Homo sapiens calcyphosine-like (CAPSL), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC26610	MGC26610
Homo sapiens	RefSeq	NM_175605.2	ILMN_18927	IFT88	NM_006531.3	NM_006531.3		8100	82546850	NM_006531.3	IFT88	NP_006522.2	ILMN_1669366	0005670288	A	2401	GCTCCCGTGGCAAAAGAGAAGGAAGTGCTAGCGGTGATAGTGGCCAGAAC	13	+	20143143-20143178:20162844-20162857	13q12.11b	Homo sapiens intraflagellar transport 88 homolog (Chlamydomonas) (IFT88), transcript variant 2, mRNA.	The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IEA]	The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence IEA]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 7633404] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence IEA]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	TTC10; hTg737; MGC26259; TG737; D13S1056E; RP11-172H24.2	hTg737; MGC26259; D13S1056E; IFT88; TG737; RP11-172H24.2
Homo sapiens	RefSeq	NM_006531.3	ILMN_18927	IFT88	NM_006531.3	NM_006531.3		8100	82546850	NM_006531.3	IFT88	NP_006522.2	ILMN_2373755	0003610537	A	2142	CAGCCTACACAAGTGAAATGGCAGCTGATGGTAGCTAGTTGTTTCAGAAG	13	+	20117096-20117097:20126015-20126062	13q12.11b	Homo sapiens intraflagellar transport 88 homolog (Chlamydomonas) (IFT88), transcript variant 2, mRNA.	The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IEA]	The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence IEA]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 7633404] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45862] [evidence IEA]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	TTC10; hTg737; MGC26259; TG737; D13S1056E; RP11-172H24.2	hTg737; MGC26259; D13S1056E; TTC10; TG737; RP11-172H24.2
Homo sapiens	RefSeq	NM_021625.3	ILMN_28501	TRPV4	NM_021625.3	NM_021625.3		59341	22547183	NM_021625.3	TRPV4	NP_067638.3	ILMN_2297353	0004760594	I	1359	CTGGACACGTGTGGGGAAGAGGCCTCCGTGCTGGAGATCCTGGTGTACAA	12	-	110234342-110234391	12q24.11b	Homo sapiens transient receptor potential cation channel, subfamily V, member 4 (TRPV4), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15753126] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11025659] [evidence NAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 18458941] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 11025659] [evidence NAS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 12724311] [evidence IDA]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [pmid 12724311] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 18458941] [evidence IDA]; The series of molecular signals initiated in response to osmotic change [goid 7231] [pmid 12724311] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus [goid 9612] [pmid 15753126] [evidence TAS]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [pmid 18458941] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 12724311] [evidence IMP]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16293632] [evidence IPI]	VROAC; TRP12; VRL2; VR-OAC; OTRPC4; VRL-2	VROAC; TRP12; VRL2; VR-OAC; OTRPC4; VRL-2
Homo sapiens	RefSeq	NM_001099.2	ILMN_23186	ACPP	NM_001099.2	NM_001099.2		55	6382063	NM_001099.2	ACPP	NP_001090.2	ILMN_1758323	0002680725	S	2717	GAAAACCTAAGCAAACTTACAGGTCCTGCTGAAACTGCCCACTCTGCAAG	3	+	133559926-133559975	3q22.1c	Homo sapiens acid phosphatase, prostate (ACPP), mRNA.			Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ACP3; ACP-3; PAP	ACP3; ACP-3; PAP
Homo sapiens	RefSeq	XM_927905.1	ILMN_138951	LOC644809	XM_927905.1	XM_927905.1		644809	89038305	XM_927905.1	LOC644809	XP_932998.1	ILMN_1682664	0007610452	S	241	CCGCTTCCGGGGCGGCCCCTCTCCAGCCACACTCCGACCCGGCGCGGCCA	15	-	38332430-38332479	15q15.1a	PREDICTED: Homo sapiens hypothetical protein LOC644809 (LOC644809), mRNA.					
Homo sapiens	RefSeq	NM_006273.2	ILMN_24123	CCL7	NM_006273.2	NM_006273.2		6354	13435401	NM_006273.2	CCL7	NP_006264.2	ILMN_1683456	0004610364	S	291	TCTGTGCTGACCCCACACAGAAGTGGGTCCAGGACTTTATGAAGCACCTG	17	+	29622855-29622904	17q12a	Homo sapiens chemokine (C-C motif) ligand 7 (CCL7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7916328] [evidence TAS]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 10770925] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 9780207] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10770925] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10201901] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7916328] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10770925] [evidence TAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	SCYA6; MCP3; MGC138463; SCYA7; FIC; MGC138465; NC28; MARC; MCP-3	SCYA6; MCP3; MGC138463; SCYA7; FIC; MGC138465; NC28; MARC; MCP-3
Homo sapiens	RefSeq	NM_017774.1	ILMN_26274	CDKAL1	NM_017774.2	NM_017774.2		54901	93277075	NM_017774.2	CDKAL1	NP_060244.2	ILMN_1788022	0002230020	S	2039	CAGCCACTCTTCTTAATGAGGCTCCCCCTGTCTCACATTGAGTTGGGCCC	6	+	21000497-21000546	6p22.3c-p22.3b	Homo sapiens CDK5 regulatory subunit associated protein 1-like 1 (CDKAL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	FLJ46705; FLJ20342; MGC75469	FLJ20342; MGC75469
Homo sapiens	RefSeq	NM_201379.1	ILMN_25265	PLEC1	NM_201379.1	NM_201379.1		5339	41322907	NM_201379.1	PLEC1	NP_958781.1	ILMN_1685313	0004780273	I	141	GGCGCAGACATGGACCCCTCGCGAGCCATCCAGAACGAGATCAGCTCCCT	8	-	145099886-145099927:145099928-145099935	8q24.3g	Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8633055] [evidence NAS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8696340] [evidence TAS]	EBS1; HD1; PLTN; EBSO; PCN; PLEC1b	EBS1; HD1; PLTN; EBSO; PCN; PLEC1b
Homo sapiens	RefSeq	NM_012105.3	ILMN_12031	BACE2	NM_138992.1	NM_138992.1		25825	21040361	NM_138992.1	BACE2	NP_620477.1	ILMN_1669323	0002230731	A	2664	CCCCTCACCCAAAAGAATTATCATCCCAACAGCCAAGACCCAACAGGTGC	21	+	41570234-41570283	21q22.3a	Homo sapiens beta-site APP-cleaving enzyme 2 (BACE2), transcript variant b, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10677483] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10749877] [evidence NAS]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10677483] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10749877] [evidence NAS]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [pmid 10591213] [evidence IDA]; The regulated release of proteins from a cell or group of cells [goid 9306] [pmid 10677483] [evidence TAS]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [pmid 10749877] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of beta-amyloid [goid 42985] [pmid 12801932] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of beta-amyloid [goid 42985] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of beta-amyloid [goid 42985] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 10591213] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ALP56; DRAP; CEAP1; BAE2; CDA13; ASP21; AEPLC; ASP1	ALP56; DRAP; CEAP1; BAE2; CDA13; ASP21; AEPLC; ASP1
Homo sapiens	RefSeq	NM_024811.2	ILMN_23711	FLJ12529	NM_024811.2	NM_024811.2		79869	24432015	NM_024811.2	FLJ12529	NP_079087.2	ILMN_1680494	0002360358	S	3128	TTTTCCCCTGTCCCCCAACCCCATCCCCACCTCCACTTCAGAACATGGCA	11	-	60927096-60927145	11q12.2b	Homo sapiens pre-mRNA cleavage factor I, 59 kDa subunit (FLJ12529), mRNA.				MGC9315; FLJ39024	MGC9315; FLJ39024
Homo sapiens	RefSeq	NM_003102.1	ILMN_184013	SOD3	NM_003102.2	NM_003102.2		6649	118582274	NM_003102.2	SOD3	NP_003093.2	ILMN_1690034	0003890095	S	1162	ATTTGTACCGAAACACCCCGCTCACGCTGACAGCCTCCTAGGCTCCCTGA	4	+	24411198-24411247	4p15.2c	Homo sapiens superoxide dismutase 3, extracellular (SOD3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8034674] [evidence TAS]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [pmid 8034674] [evidence TAS]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC20077; EC-SOD	EC-SOD
Homo sapiens	RefSeq	NM_053053.2	ILMN_25791	TADA1L	NM_053053.2	NM_053053.2		117143	37059729	NM_053053.2	TADA1L	NP_444281.1	ILMN_2194649	0003840463	S	1794	GCTTGGTAATTCTCCAGTTTCTAGGAGGTACCTATTTCTACCGTTTCAAG	1	-	165092601-165092650	1q24.1c	Homo sapiens transcriptional adaptor 1 (HFI1 homolog, yeast)-like (TADA1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		RP1-9E21.4; KIAA0764; STAF42	RP1-9E21.4; KIAA0764; STAF42
Homo sapiens	RefSeq	NM_053053.2	ILMN_25791	TADA1L	NM_053053.2	NM_053053.2		117143	37059729	NM_053053.2	TADA1L	NP_444281.1	ILMN_1776487	0005810619	S	1499	CCTCCTTTAGTGACCAGTTCAAATTTTAATAGCGATAGGTAGCCCCTGAG	1	-	165092896-165092945	1q24.1c	Homo sapiens transcriptional adaptor 1 (HFI1 homolog, yeast)-like (TADA1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		RP1-9E21.4; KIAA0764; STAF42	RP1-9E21.4; KIAA0764; STAF42
Homo sapiens	RefSeq	NM_017913.2	ILMN_559	CDC37L1	NM_017913.2	NM_017913.2		55664	66773037	NM_017913.2	CDC37L1	NP_060383.2	ILMN_1764185	0003130064	S	1234	GACTGCTGAGGCCAAGTGCTATTTTGTTACAAGAAAGGAAGAACTTGGCT	9	+	4685066-4685115	9p24.1c	Homo sapiens cell division cycle 37 homolog (S. cerevisiae)-like 1 (CDC37L1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP11-6J24.5; HARC; CDC37B; FLJ20639	RP11-6J24.5; HARC; CDC37B; FLJ20639
Homo sapiens	RefSeq	NM_021267.2	ILMN_170511	GDF1	NM_001492.4	NM_001492.4		2657	110349791	NM_001492.4	GDF1	NP_001483.3	ILMN_1728642	0006450121	A	283	ACCGCCCTGCGCTCCGCGGCCACTGCGCGCCTCTTTCGGCCCCTGGCGAA	19	-	19004373-19004384:19006633-19006670	19p13.11b	Homo sapiens growth differentiation factor 1 (GDF1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		UOG1; LAG1; MGC90349
Homo sapiens	RefSeq	NM_021267.2	ILMN_170511	GDF1	NM_001492.4	NM_001492.4		2657	110349791	NM_001492.4	GDF1	NP_001483.3	ILMN_1662280	0002940092	I	1306	CCCTCCGGGGACACCGGCCCCGCCCTCAGCCCACTGGTCCCGGGCCGCCG	19	-	18981155-18981204	19p13.11b	Homo sapiens growth differentiation factor 1 (GDF1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		UOG1; LAG1; MGC90349
Homo sapiens	RefSeq	NM_001492.3	ILMN_170511	GDF1	NM_001492.4	NM_001492.4		2657	110349791	NM_001492.4	GDF1	NP_001483.3	ILMN_1685319	0004860619	S	104	CGGGGCCCGAGCCCATGCCGAGCTACGCGCAGCTAGTGCAGCGCGGCTGG	19	-	19006800-19006849	19p13.11b	Homo sapiens growth differentiation factor 1 (GDF1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]		Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Homo sapiens	RefSeq	XM_498063.2	ILMN_39729	LOC222699	NR_002936.1	NR_002936.1		222699	89941466	NR_002936.1	LOC222699		ILMN_1657832	0000460372	A	998	AATCCCAGCTCTCGCCCCAAGGCCACGTACAGTCTCAAGTACAACAGTGG	6	-	28293639-28293688	6p22.1b	Homo sapiens transducer of ERBB2, 2 pseudogene (LOC222699), non-coding RNA.					
Homo sapiens	RefSeq	NM_003162.2	ILMN_170426	STRN	NM_003162.2	NM_003162.2		6801	51242944	NM_003162.2	STRN	NP_003153.2	ILMN_2129273	0005270441	S	3403	ATAGCCCAAAGAGTATGGTTAACTTCACGCAGCTGCTTTTGCAGAAGCAC	2	-	37075498-37075547	2p22.2b	Homo sapiens striatin, calmodulin binding protein (STRN), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 9693043] [evidence NAS]	MGC125642; SG2NA	MGC125642; SG2NA
Homo sapiens	Unigene	Hs.518527	ILMN_99459	HS.518527	Hs.518527		Hs.518527		51464036	XM_374071			ILMN_1830598	0004610463	S	499	GCGCTGTTCTCCTTCCTGTGCCGAGTGTGGTTTGCTATCAAGCGGTGGCA					PREDICTED: Homo sapiens hypothetical LOC389189 (LOC389189), mRNA					
Homo sapiens	RefSeq	NM_178543.3	ILMN_9542	ENPP7	NM_178543.3	NM_178543.3		339221	45545420	NM_178543.3	ENPP7	NP_848638.2	ILMN_1675413	0000450576	S	1357	GACTGCTGGGGACCGTGATTCTTCTGTCTGAGGTCGCATAACGCCCCATG	17	+	75326400-75326440:75326441-75326449	17q25.3d	Homo sapiens ectonucleotide pyrophosphatase/phosphodiesterase 7 (ENPP7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12671034] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [pmid 12671034] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 12885774] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 12671034] [evidence IDA]; The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 12885774] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 12671034] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 12671034] [evidence IDA]	Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [pmid 12671034] [evidence IDA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [pmid 12885774] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC50179; ALK-SMase	MGC50179; ALK-SMase
Homo sapiens	RefSeq	NM_178543.3	ILMN_9542	ENPP7	NM_178543.3	NM_178543.3		339221	45545420	NM_178543.3	ENPP7	NP_848638.2	ILMN_2130468	0006060035	S	1543	CCAACCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAG	17	+	75330317-75330366	17q25.3d	Homo sapiens ectonucleotide pyrophosphatase/phosphodiesterase 7 (ENPP7), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12671034] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [pmid 12671034] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 12885774] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 12671034] [evidence IDA]; The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 12885774] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 12671034] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 12671034] [evidence IDA]	Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [pmid 12671034] [evidence IDA]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [pmid 12885774] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC50179; ALK-SMase	MGC50179; ALK-SMase
Homo sapiens	RefSeq	NM_007197.2	ILMN_16009	FZD10	NM_007197.2	NM_007197.2		11211	22035684	NM_007197.2	FZD10	NP_009128.1	ILMN_2105539	0002260192	S	2981	AGACGTTTGGACTGATTTGTGGAAAGGAGGGGGGAAGAGGGAGAAGGATC	12	+	129215965-129216014	12q24.33a	Homo sapiens frizzled homolog 10 (Drosophila) (FZD10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10448064] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4926] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [pmid 10448064] [evidence TAS]	FzE7; CD350; hFz10; FZ-10	FzE7; CD350; hFz10; FZ-10
Homo sapiens	RefSeq	XM_945831.1	ILMN_183522	LOC731999	XM_001131546.1	XM_001131546.1		731999	113426477	XM_001131546.1	LOC731999	XP_001131546.1	ILMN_1660323	0003610341	I	365	GTCAGCGCTGCCAGCGTGGAAGGAGCTGCGGGGCGCGGGAGGAGGAAGTA					PREDICTED: Homo sapiens similar to CG1486-PA, isoform A (LOC731999), mRNA.					
Homo sapiens	RefSeq	XM_942260.1	ILMN_183522	LOC731999	XM_001131546.1	XM_001131546.1		731999	113426477	XM_001131546.1	LOC731999	XP_001131546.1	ILMN_1660277	0004760600	I	1713	GAGGCACTCGTGTGATGCGCTGAATCGCTGGCTGGGAGAACAGCTGAAGC					PREDICTED: Homo sapiens similar to CG1486-PA, isoform A (LOC731999), mRNA.					
Homo sapiens	RefSeq	XM_931261.1	ILMN_32401	WHDC1L1	XM_931261.1	XM_931261.1		339005	89038017	XM_931261.1	WHDC1L1	XP_936354.1	ILMN_1797368	0002940575	I	1258	AAAATGATTATTACCCCAATCCCATCATCTAGAGATGCTCAATGGTTGGC	15	-	20749723-20749772	15q11.2c	PREDICTED: Homo sapiens WAS protein homology region 2 domain containing 1-like 1, transcript variant 3 (WHDC1L1), mRNA.					
Homo sapiens	RefSeq	XM_941488.1	ILMN_44845	TREML3	XM_941488.2	XM_941488.2		340206	113418067	XM_941488.2	TREML3	XP_946581.1	ILMN_1798103	0000650279	I	239	CGGTGCCCTCTGAGAAACCTCAGCTTGAACTCTTTGGGTCATCACCAGAC				6p21.1g	PREDICTED: Homo sapiens triggering receptor expressed on myeloid cells-like 3 (TREML3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.459805	ILMN_94206	HS.459805	Hs.459805		Hs.459805		23663356	BU734938			ILMN_1861985	0003850086	S	122	GCGGTGCTGGAACTTCTCAAAGTCACACAGGTTGCAGGAGGCAGAACCCG	16	-	5107961-5108010		UI-E-DW0-agi-o-06-0-UI.s1 UI-E-DW0 Homo sapiens cDNA clone UI-E-DW0-agi-o-06-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_152789.1	ILMN_181197	FAM133B	NM_001040057.1	NM_001040057.1		257415	91206453	NM_001040057.1	FAM133B	NP_001035146.1	ILMN_1777745	0005130672	S	2190	GCTCTCCCTGTGTCATATTTTACTAAGATTTTGTGCCTCATGTCTACTGC	7	-	92190300-92190349	7q21.2b	Homo sapiens family with sequence similarity 133, member B (FAM133B), transcript variant 2, mRNA.				MGC40405	
Homo sapiens	RefSeq	NM_003906.3	ILMN_19614	MCM3AP	NM_003906.3	NM_003906.3		8888	33469915	NM_003906.3	MCM3AP	NP_003897.2	ILMN_1784766	0000110270	S	5957	TGCTAGACATGGTGGACATTTGAGCAGCCTGACCTGTGGGGAGGGGGTCT	21	-	47655154-47655181:47655182-47655203	21q22.3f	Homo sapiens minichromosome maintenance complex component 3 associated protein (MCM3AP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9712829] [evidence TAS]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [pmid 9712829] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9712829] [evidence TAS]	GANP; FLJ44336; MAP80; FLJ45306; KIAA0572	GANP; FLJ44336; MAP80; FLJ45306; KIAA0572
Homo sapiens	RefSeq	NM_003435.2	ILMN_4618	ZNF134	NM_003435.2	NM_003435.2		7693	55925469	NM_003435.2	ZNF134	NP_003426.2	ILMN_1768809	0003390608	S	3229	ACCTGAGGCCCTTAACCTTTCTCTCAGTGCTCGCCTTCCCCCAGAATCCC	19	+	62826227-62826276	19q13.43b	Homo sapiens zinc finger protein 134 (ZNF134), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7557990] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7557990] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC141970; pHZ-15; MGC138499	MGC141970; pHZ-15; MGC138499
Homo sapiens	RefSeq	NM_007163.2	ILMN_19280	SLC14A2	NM_007163.2	NM_007163.2		8170	21361371	NM_007163.2	SLC14A2	NP_009094.2	ILMN_1664320	0000020634	S	3477	CAAAGTCACCTACCCAGAGGCCAACCGCATCTACTACCTGTCCCAGGAGA	18	+	41516380-41516429	18q12.3f	Homo sapiens solute carrier family 14 (urea transporter), member 2 (SLC14A2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8647271] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8647271] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The directed movement into, out of or within the cell of urea, the water-soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle [goid 15840] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement into, out of or within the cell of urea, the water-soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle [goid 15840] [pmid 8647271] [evidence TAS]	Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17702749] [evidence IPI]; Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [evidence IEA]; Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [pmid 8647271] [evidence TAS]	HUT2; hUT-A6; FLJ16167; UTR; MGC119566; UT-A2; MGC119567; UT2	HUT2; hUT-A6; FLJ16167; UTR; MGC119566; UT-A2; MGC119567; UT2
Homo sapiens	Unigene	Hs.553301	ILMN_111327	HS.553301	Hs.553301		Hs.553301		10854898	AV737317			ILMN_1829845	0001010082	S	380	GTGCTGTGTCACTCAAACAACCACTCCAGAACCCTGATGCCTTTCTTGGG	13	+	110344713-110344762		AV737317 CB Homo sapiens cDNA clone CBCAQH03 5, mRNA sequence					
Homo sapiens	RefSeq	XR_037747.1	ILMN_342153	LOC100128007	XR_037747.1	XR_037747.1		100128007	169211256	XR_037747.1	LOC100128007		ILMN_3261273	0006180025	M	585	CCAATGAGCTTCAGTGGGGCCATTCTCTGAAGATCTCTCCATCTTGTTTC				17p13.2a	PREDICTED: Homo sapiens misc_RNA (LOC100128007), miscRNA.					
Homo sapiens	RefSeq	XM_928866.1	ILMN_37216	LOC645895	XM_928866.1	XM_928866.1		645895	89028131	XM_928866.1	LOC645895	XP_933959.1	ILMN_1711156	0001940709	S	83	TGTGGCGCGCGCCTGTAGTCCCAGCTACTTTGGAGGCTGAGGCAAGAGGA	8	-	67689479-67689528	8q13.1b	PREDICTED: Homo sapiens hypothetical protein LOC645895 (LOC645895), mRNA.					
Homo sapiens	RefSeq	NM_178313.1	ILMN_17508	SPTBN1	NM_178313.2	NM_178313.2		6711	112382251	NM_178313.2	SPTBN1	NP_842565.2	ILMN_1714228	0002750609	I	6807	TTAATAGCAGACGGACAGCCAGTGACCAGCCATGGTCTGGACTGTGAAGT	2	+	54740681-54740727:54740728-54740730	2p16.2a	Homo sapiens spectrin, beta, non-erythrocytic 1 (SPTBN1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9537418] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9537418] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [pmid 1527002] [evidence TAS]	 [goid 7182] [evidence IEA];  [goid 7184] [evidence IEA]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 1527002] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 1527002] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	SPTB2; ELF; betaSpII	SPTB2
Homo sapiens	Unigene	Hs.555200	ILMN_112218	HS.555200	Hs.555200		Hs.555200		7770208	AF119886			ILMN_1909743	0006060292	S	821	CAACAGGAAGTGATGACAGCCTTCCCTATTTGGTAGTTTCAGGCCTGAAC	3	+	116322529-116322578		Homo sapiens PRO2591 mRNA, complete cds					
Homo sapiens	RefSeq	NM_001865.2	ILMN_19166	COX7A2	NM_001865.2	NM_001865.2		1347	18105035	NM_001865.2	COX7A2	NP_001856.1	ILMN_1701293	0000540491	S	82	CGGAATCTGCTGGCTCTTCGTCAGATTGGGCAGAGGACGATAAGCACTGC	6	-	76007663-76007701:76010153-76010163	6q14.1a	Homo sapiens cytochrome c oxidase subunit VIIa polypeptide 2 (liver) (COX7A2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	MGC118950; MGC118952; COX7AL; MGC126875; COX7AL1; MGC126877; MGC118951; COXVIIa-L	MGC118950; MGC118952; COX7AL; MGC126875; COX7AL1; MGC126877; MGC118951; COXVIIa-L
Homo sapiens	Unigene	Hs.542013	ILMN_106059	HS.542013	Hs.542013		Hs.542013		5440368	AI821289			ILMN_1837842	0006660441	S	292	CGGCACTATCTCATATGGTAAACATCTGCCCACCCTATGGCCTAGCAGAG	2	-	60141516-60141565		ya81a07.x5 Stratagene ovary (#937217) Homo sapiens cDNA clone IMAGE:68052 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002990.3	ILMN_21395	CCL22	NM_002990.3	NM_002990.3		6367	22538803	NM_002990.3	CCL22	NP_002981.2	ILMN_2160476	0002480092	S	2577	GAACCTGTGGAATTGGAGGAGGCCATTTCACTCCCTGAACCCAGCCTGAC	16	+	55957285-55957334	16q13c	Homo sapiens chemokine (C-C motif) ligand 22 (CCL22), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9743322] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10861057] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9151897] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10861057] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9743322] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9151897] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9381181] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10861057] [evidence TAS]	A-152E5.1; MGC34554; DC/B-CK; SCYA22; MDC; STCP-1; ABCD-1	A-152E5.1; MGC34554; DC/B-CK; SCYA22; MDC; STCP-1; ABCD-1
Homo sapiens	Unigene	Hs.574099	ILMN_126280	HS.574099	Hs.574099		Hs.574099		2113441	AA430240			ILMN_1898785	0004200184	S	149	CAACAGTAGAGACTCCAAAAAGCGGTAAAGAAGAAGGGGGACAAGGACTG	13	-	84616899-84616948		zw65f04.r1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:781087 5, mRNA sequence					
Homo sapiens	Unigene	Hs.572642	ILMN_124823	HS.572642	Hs.572642		Hs.572642		34535871	AK128481			ILMN_1841620	0007320068	S	1999	CTAGGGCATCCTATACATCCTACCACAGAAGGCCAAGGGACAGAGCACCA	2	-	230337650-230337699		Homo sapiens cDNA FLJ46626 fis, clone TRACH2001612					
Homo sapiens	RefSeq	NM_001018036.1	ILMN_14170	TSHR	NM_001018036.1	NM_001018036.1		7253	64085160	NM_001018036.1	TSHR	NP_001018046.1	ILMN_2314121	0004050022	A	718	GGCTTTACTTCAGTCCAAGGATATGCTTTCAATGGGACAAAGCTGGATGC	14	+	80632752-80632801	14q31.1b-q31.1c	Homo sapiens thyroid stimulating hormone receptor (TSHR), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8552586] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 8552586] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7920658] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 7920658] [evidence TAS]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with thyroid-stimulating hormone to initiate a change in cell activity [goid 4996] [pmid 8552586] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	hTSHR-I; LGR3; MGC75129	hTSHR-I; LGR3; MGC75129
Homo sapiens	RefSeq	NM_001018036.1	ILMN_14170	TSHR	NM_001018036.1	NM_001018036.1		7253	64085160	NM_001018036.1	TSHR	NP_001018046.1	ILMN_1660639	0004220575	I	915	ATGATGCCTGCTAAGGCAGCCACCTTGGTGTACATGCTCACAGAGGCTCT	14	+	80644775-80644778:80644779-80644824	14q31.1b-q31.1c	Homo sapiens thyroid stimulating hormone receptor (TSHR), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8552586] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 8552586] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7920658] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 7920658] [evidence TAS]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with thyroid-stimulating hormone to initiate a change in cell activity [goid 4996] [pmid 8552586] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	hTSHR-I; LGR3; MGC75129	hTSHR-I; LGR3; MGC75129
Homo sapiens	RefSeq	XR_039593.1	ILMN_342458	LOC653753	XR_039593.1	XR_039593.1		653753	169213995	XR_039593.1	LOC653753		ILMN_3208099	0001070634	A	9	GGACCTCCCAGCCCTGAAGACAAACATCAGTGACAGACATCAGTGGCAGA				19q13.41b	PREDICTED: Homo sapiens misc_RNA (LOC653753), miscRNA.					
Homo sapiens	RefSeq	XM_940135.1	ILMN_31551	LOC651022	XM_940135.1	XM_940135.1		651022	88999057	XM_940135.1	LOC651022	XP_945228.1	ILMN_1678651	0002370315	S	3	GGAAGCTGCAAACCTTCGCGTGAGTGTTACAGCTTTTAAGGCGGCGCATC					PREDICTED: Homo sapiens hypothetical protein LOC651022 (LOC651022), mRNA.					
Homo sapiens	RefSeq	XR_038616.1	ILMN_345154	LOC344887	XR_038616.1	XR_038616.1		344887	169165696	XR_038616.1	LOC344887		ILMN_3210914	0004060010	A	1291	CAAGCCCTAATGCTGAAATTCCCCTAGGCAGCTCCAGTTTTCTCAACTGC				3q27.2b	PREDICTED: Homo sapiens misc_RNA (LOC344887), miscRNA.					
Homo sapiens	RefSeq	XM_001723046.1	ILMN_348153	LOC100131792	XM_001723046.1	XM_001723046.1		100131792	169168240	XM_001723046.1	LOC100131792	XP_001723098.1	ILMN_3214384	0001240204	A	2101	CAAGCTTTTCTCCTGTTTCGTCGTTCAGGTGGCAGAGATCGTTGCTCCGC				5q23.2e	PREDICTED: Homo sapiens hypothetical protein LOC100131792 (LOC100131792), mRNA.					
Homo sapiens	RefSeq	XM_001723046.1	ILMN_348153	LOC100131792	XM_001723046.1	XM_001723046.1		100131792	169168240	XM_001723046.1	LOC100131792	XP_001723098.1	ILMN_3290889	0004640685	M	2185	TTGGGATGGATTACAGAGGATGTGCCCTCCTAGTGGCCCCCGCCAGCCAC				5q23.2e	PREDICTED: Homo sapiens hypothetical protein LOC100131792 (LOC100131792), mRNA.					
Homo sapiens	RefSeq	NM_014635.3	ILMN_11554	GCC2	NM_014635.3	NM_014635.3		9648	34335132	NM_014635.3	GCC2	NP_055450.1	ILMN_2408730	0007320500	A	4311	CCCAGAACGAGGTCCTTCGAAATAGCTTCCGAGATCAAGTGCGACATTTG	2	+	108475532-108475581	2q12.3c	Homo sapiens GRIP and coiled-coil domain containing 2 (GCC2), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18243103] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KIAA0336; GCC185	KIAA0336; GCC185
Homo sapiens	RefSeq	NM_013337.2	ILMN_29380	TIMM22	NM_013337.2	NM_013337.2		29928	56606060	NM_013337.2	TIMM22	NP_037469.2	ILMN_1706959	0003390373	S	1551	TCGCTGAGGGGCTGTTCACCACCATCCTCGTTCTCCAGGGTCAAGGAAGT	17	+	852018-852067	17p13.3f	Homo sapiens translocase of inner mitochondrial membrane 22 homolog (yeast) (TIMM22), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	TIM22; TEX4	TIM22; TEX4
Homo sapiens	RefSeq	XM_941360.1	ILMN_39390	LOC652045	XM_941360.1	XM_941360.1		652045	89067131	XM_941360.1	LOC652045	XP_946453.1	ILMN_1751266	0000380110	S	46	CTTCCCCTGCTTCGGGGCTTCTCCCCTCGTCGCACTCTCACTTTGTCTTT					PREDICTED: Homo sapiens similar to hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2 (LOC652045), mRNA.					
Homo sapiens	RefSeq	XM_931065.1	ILMN_41196	LOC642765	XM_931065.1	XM_931065.1		642765	88997621	XM_931065.1	LOC642765	XP_936158.1	ILMN_1755489	0002000040	S	381	GTGGGGCCTCCCAAGGGACAAATGTGGCTTTAAGGATAAGAGCATTGGCG	6	+	100070062-100070071:100070982-100071021	6q16.3a	PREDICTED: Homo sapiens hypothetical protein LOC642765 (LOC642765), mRNA.					
Homo sapiens	Unigene	Hs.553310	ILMN_111333	HS.553310	Hs.553310		Hs.553310		24788498	CA425772			ILMN_1895827	0007320279	S	157	GAGGAGCCACAGGACACCAGAGCATCTGCTACAACCCCAGCCAAGATGGT	1	-	2133937-2133942:2141834-2141877		UI-H-FE1-beg-g-15-0-UI.s1 NCI_CGAP_FE1 Homo sapiens cDNA clone UI-H-FE1-beg-g-15-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000994.3	ILMN_11712	RPL32	NM_001007074.1	NM_001007074.1		6161	55743129	NM_001007074.1	RPL32	NP_001007075.1	ILMN_1798636	0002030681	A	696	GTCTTCAGCTTCTTGGCCAACTTAGTTTGCCACAGAGATTGTTCTTTTGC	3	-	12877468-12877517	3p25.1d	Homo sapiens ribosomal protein L32 (RPL32), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	PP9932	PP9932
Homo sapiens	RefSeq	XM_941507.1	ILMN_11712	RPL32	NM_001007074.1	NM_001007074.1		6161	55743129	NM_001007074.1	RPL32	NP_001007075.1	ILMN_1663799	0006400437	S	519	TGTTTCCTCCAAGAACCGCAAAGCCATCGTGGAAAGAGCTGCCCAACTGG	3	-	12877645-12877694	3p25.1d	Homo sapiens ribosomal protein L32 (RPL32), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	PP9932	
Homo sapiens	RefSeq	NM_001007074.1	ILMN_11712	RPL32	NM_001007074.1	NM_001007074.1		6161	55743129	NM_001007074.1	RPL32	NP_001007075.1	ILMN_1782167	0006960220	I	2	ACCTCCTGGGATCGCATCTGGAGAGTGCCTAGTATTCTGCCAGCTTCGGA	3	-	12881898-12881947	3p25.1d	Homo sapiens ribosomal protein L32 (RPL32), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	PP9932	PP9932
Homo sapiens	Unigene	Hs.529590	ILMN_101307	HS.529590	Hs.529590		Hs.529590		33317148	AF447883			ILMN_1863212	0002120138	S	1225	CCGTGCACCAGTCACCCTGAGCATTGTACGGGAGTTTTGGAAAGGAGCAG	7	+	36091603-36091652		Homo sapiens PP13004 mRNA, complete cds					
Homo sapiens	RefSeq	NM_019018.1	ILMN_10775	FAM105A	NM_019018.1	NM_019018.1		54491	9506640	NM_019018.1	FAM105A	NP_061891.1	ILMN_1695711	0005130661	S	1120	CACTACCACATTCCAGTCTTTTAAGTCCGCTGGGGGCCGAACAGCAGTGC	5	+	14663400-14663423:14663424-14663449	5p15.2a	Homo sapiens family with sequence similarity 105, member A (FAM105A), mRNA.				FLJ11127	FLJ11127
Homo sapiens	RefSeq	XR_042317.1	ILMN_339100	LOC644619	XR_042317.1	XR_042317.1		644619	169170136	XR_042317.1	LOC644619		ILMN_3280667	0004150608	M	1918	AGCAGATCCACAAAGCCTCAGCCACCATCATTGAGCCAGCGGGCGAGTCA	7	+	64820732-64820736:64820955-64820999	7q11.21d	PREDICTED: Homo sapiens misc_RNA (LOC644619), miscRNA.					
Homo sapiens	RefSeq	XM_934972.1	ILMN_38145	NBPF1	XM_934972.1	XM_934972.1		55672	88942450	XM_934972.1	NBPF1	XP_940065.1	ILMN_1796087	0002000168	I	3657	ACCAGGACTTCCTGGGTAAGAACGGAGTTGGGAAACCCATGGGGTTGGAG	1	-	16775170-16775219	1p36.13f-p36.13e	PREDICTED: Homo sapiens neuroblastoma breakpoint family, member 1, transcript variant 11 (NBPF1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NM_014210.2	ILMN_1246	EVI2A	NM_014210.2	NM_014210.2		2123	51511743	NM_014210.2	EVI2A	NP_055025.2	ILMN_1733579	0004590224	A	1034	GACCTTGCAATTTAGAATCAAGCAGGTGAGACAGGGAGAAGTATGCCTGC	17	-	29645163-29645212	17q11.2d	Homo sapiens ecotropic viral integration site 2A (EVI2A), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 2117566] [evidence NAS]	EVI2; EVDA	EVDA; EVI2
Homo sapiens	RefSeq	NM_014210.2	ILMN_1246	EVI2A	NM_014210.2	NM_014210.2		2123	51511743	NM_014210.2	EVI2A	NP_055025.2	ILMN_2369018	0002680162	A	1391	CTTCCTTGCTGGATGTGGCAGAATCCACACCAGCTTATCAACCAACACAG	17	-	29644806-29644855	17q11.2d	Homo sapiens ecotropic viral integration site 2A (EVI2A), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 2117566] [evidence NAS]	EVI2; EVDA	EVDA; EVI2
Homo sapiens	RefSeq	XM_938047.1	ILMN_45063	LOC402160	XM_938047.2	XM_938047.2		402160	113415965	XM_938047.2	LOC402160	XP_943140.2	ILMN_1726942	0002850228	S	965	CTCCTGAGCCCGCCGCGTCGCCCGCCAGGTGGGAGGAGAAGAAGGCCCTT				4p16.3a	PREDICTED: Homo sapiens hypothetical LOC402160 (LOC402160), mRNA.					
Homo sapiens	RefSeq	NR_003128.1	ILMN_168909	LOC284441	NR_003128.1	NR_003128.1		284441	112734753	NR_003128.1	LOC284441		ILMN_2108150	0006180424	S	1322	CTCCCAGATGGAGGAATCATCAAAGTTGGGGGAGAGAGATTTGAAACACC	19	+	20230778-20230827	19p12d	Homo sapiens actin-related protein 2 pseudogene (LOC284441), non-coding RNA.					
Homo sapiens	RefSeq	XM_926403.1	ILMN_44638	LOC643032	XM_926403.1	XM_926403.1		643032	89059534	XM_926403.1	LOC643032	XP_931496.1	ILMN_1696263	0007550255	S	181	CCAGCTCAGAACAGGACCAGAGGGATGGACCGGGATGACAGGAAAACTGG	X	-	41047351-41047400		PREDICTED: Homo sapiens hypothetical protein LOC643032 (LOC643032), mRNA.					
Homo sapiens	RefSeq	XM_001719596.1	ILMN_346103	CTGLF5	XM_001719596.1	XM_001719596.1		728404	169194835	XM_001719596.1	CTGLF5	XP_001719648.1	ILMN_3244555	0003400463	S	493	CAGCACAGAGGCAGCGCCACCTCGCTTGTTTGGATAGTAAAGAAAACAAC				10q11.23a	PREDICTED: Homo sapiens centaurin, gamma-like family, member 5 (CTGLF5), mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_031889.1	ILMN_21621	ENAM	NM_031889.1	NM_031889.1		10117	13994233	NM_031889.1	ENAM	NP_114095.1	ILMN_1751375	0007160598	S	5414	GCTTTTCCTGAAAGGTGACTGTCTAGGATGCTGAATGAGCCACCACTCCG	4	+	71731140-71731189	4q13.3b	Homo sapiens enamelin (ENAM), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence NAS]	The deposition of calcium phosphate in bone tissue [goid 30282] [evidence NAS]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence NAS]	The action of a molecule that contributes to the structural integrity of tooth enamel [goid 30345] [evidence NAS]	ADAI; AIH2	ADAI; AIH2
Homo sapiens	RefSeq	XM_001719961.1	ILMN_346141	LOC100133775	XM_001719961.1	XM_001719961.1		100133775	169217892	XM_001719961.1	LOC100133775	XP_001720013.1	ILMN_3212045	0007510519	A	1641	GTCTCACTATGTTGCCCAGGCTGGTCTCGAACTCCCGTAATCCAGCCATG					PREDICTED: Homo sapiens similar to Chromosome 7 open reading frame 28B (LOC100133775), mRNA.					
Homo sapiens	RefSeq	XM_930817.1	ILMN_37601	LOC642434	XM_930817.1	XM_930817.1		642434	89031647	XM_930817.1	LOC642434	XP_935910.1	ILMN_1777901	0000160040	S	744	TGTCTGGACGCGCGCTTTGCCTCTTCTCTGCGACAGATGCGCCAGAGTTT	10	-	126595101-126595150		PREDICTED: Homo sapiens hypothetical protein LOC642434 (LOC642434), mRNA.					
Homo sapiens	RefSeq	NM_001003704.1	ILMN_27175	MTP18	NM_001003704.1	NM_001003704.1		51537	51243056	NM_001003704.1	MTP18	NP_001003704.1	ILMN_2372040	0000050608	A	517	CCCTGGCACCTGGGTGGGTTTGAGCTGGACAGAAGCTTAGAGACAAAGGC	22	+	29154622-29154661:29154662-29154671	22q12.2b	Homo sapiens mitochondrial protein 18 kDa (MTP18), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA];  [goid 15976] [evidence IEA]	Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	HSPC242	HSPC242
Homo sapiens	RefSeq	NM_005116.5	ILMN_3444	SLC23A2	NM_005116.5	NM_005116.5		9962	44680146	NM_005116.5	SLC23A2	NP_005107.4	ILMN_1666361	0004830370	I	44	TGCGGCGCCGAGGCGCGGCGGCAGGACGGGAACCACGCGAGCTGCAGCCA	20	-	4982052-4982101	20p13a	Homo sapiens solute carrier family 23 (nucleobase transporters), member 2 (SLC23A2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9804989] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9804989] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 9804989] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acid, into, out of, within or between cells [goid 15851] [pmid 9804989] [evidence TAS]; The directed movement of molecular hydrogen (H2) into, out of, within or between cells [goid 15993] [pmid 10471399] [evidence NAS]; The chemical reactions and pathways involving L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 19852] [pmid 10556521] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: multivitamin(out) + Na+(out) = multivitamin(in) + Na+(in). Multivitamins include pantothenate, biotin and lipoate [goid 8523] [pmid 10471399] [evidence NAS]; Catalysis of the transfer of a nucleobase, any nitrogenous base that is a constituent of a nucleoside, nucleotide, or nucleic acidfrom one side of a membrane to the other [goid 15205] [pmid 9804989] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	NBTL1; SLC23A1; SVCT2; YSPL2; KIAA0238	NBTL1; SLC23A1; SVCT2; YSPL2; KIAA0238
Homo sapiens	RefSeq	NM_001080779.1	ILMN_174343	MYO1C	NM_001080779.1	NM_001080779.1		4641	124494237	NM_001080779.1	MYO1C	NP_001074248.1	ILMN_2250820	0002100500	I	78	GCTGCAGTTGAAGCAGAACCAAGTGGCCATCCCGGCGTTAGACCGTAGGT	17	-	1395874-1395923	17p13.3e	Homo sapiens myosin IC (MYO1C), transcript variant 1, mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [pmid 9858156] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9858156] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IEA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [pmid 9858156] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 9858156] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [pmid 9858156] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IEA]; A myosin complex containing a class I myosin heavy chain and associated light chains; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments; myosin I complexes are involved in diverse processes related to membrane traffic and cell movement [goid 45160] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	NMI; MMI-beta; myr2; FLJ23903; MMIb	NMI; MMI-beta; myr2; FLJ23903; MMIb
Homo sapiens	RefSeq	NM_001080779.1	ILMN_174343	MYO1C	NM_001080779.1	NM_001080779.1		4641	124494237	NM_001080779.1	MYO1C	NP_001074248.1	ILMN_2329165	0000380086	A	4593	TAAGAGTATATCTGGCTCCTTGACCAGCAATCGGCCCTGGGAGCCACCAG	17	-	1367789-1367838	17p13.3e	Homo sapiens myosin IC (MYO1C), transcript variant 1, mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [pmid 9858156] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9858156] [evidence IDA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IEA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [pmid 9858156] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 9858156] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [pmid 9858156] [evidence IDA]; An actin-based protrusion from the apical surface of auditory and vestibular hair cells. Bundles of stereocilia act as mechanosensory organelles [goid 32420] [evidence IEA]; A myosin complex containing a class I myosin heavy chain and associated light chains; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments; myosin I complexes are involved in diverse processes related to membrane traffic and cell movement [goid 45160] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	NMI; MMI-beta; myr2; FLJ23903; MMIb	NMI; MMI-beta; myr2; FLJ23903; MMIb
Homo sapiens	Unigene	Hs.221951	ILMN_82509	HS.221951	Hs.221951		Hs.221951		5863084	AW014327			ILMN_1864587	0007100025	S	417	CCTGAGCCAAAACAAACCAGCCACGCCTTTCTTCAAATCCCAGCCCACAG	19	-	49999145-49999194		UI-H-BI0p-aax-d-06-0-UI.s1 NCI_CGAP_Sub2 Homo sapiens cDNA clone IMAGE:2710715 3, mRNA sequence					
Homo sapiens	RefSeq	XM_926017.1	ILMN_32784	LOC642521	XM_926017.1	XM_926017.1		642521	89031514	XM_926017.1	LOC642521	XP_931110.1	ILMN_1654641	0000060008	S	1	ATGACCCCAAGCTCTCCAGAGGAGAAGGACGTCTTGTGGCTGAAAGAGAC	10	-	81774926-81774931:81779238-81779281	10q22.3f	PREDICTED: Homo sapiens similar to nuclear DNA-binding protein (LOC642521), mRNA.					
Homo sapiens	RefSeq	NM_001006604.1	ILMN_309113	LOC387646	NR_003525.1	NR_003525.1		387646	146198637	NR_003525.1	LOC387646		ILMN_1786771	0002510468	S	4880	CACCCCTGCAAAAGCCCTACCTCAGGTCAGAGACAGAGCAAAAGACTTAA	10	-	27576312-27576361	10p12.1a	Homo sapiens leucine rich repeat containing 37, member A family pseudogene (LOC387646), non-coding RNA.				FLJ44924	FLJ44924
Homo sapiens	RefSeq	NM_145110.1	ILMN_10112	MAP2K3	NM_145110.1	NM_145110.1		5606	21618350	NM_145110.1	MAP2K3	NP_659732.1	ILMN_1771156	0001770202	I	136	GAGGTACTCAAGATGTGCCCAGTGCGGGCTGAGATAAGGCCCTGGAGTCC	17	+	21142046-21142095	17p11.2b	Homo sapiens mitogen-activated protein kinase kinase 3 (MAP2K3), transcript variant C, mRNA.		The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7839144] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [pmid 11980910] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11980910] [evidence IDA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 7839144] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11980910] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MAPKK3; PRKMK3; MEK3; MKK3	MAPKK3; PRKMK3; MEK3; MKK3
Homo sapiens	RefSeq	XM_497365.2	ILMN_32399	LOC390378	XM_497365.2	XM_497365.2		390378	89036645	XM_497365.2	LOC390378	XP_497365.2	ILMN_1708049	0005570243	A	344	AAACTGAGTGGTGGGCCAGCAGCCAGGTGGTCTTTGCAAGGTGCAAGGAG	13	-	19651208-19651257	13q12.11a	PREDICTED: Homo sapiens similar to peptidylprolyl isomerase A isoform 1 (LOC390378), mRNA.					
Homo sapiens	RefSeq	NR_030169.1	ILMN_387803	MIR146B	NR_030169.1	NR_030169.1		574447	262205193	NR_030169.1	MIR146B		ILMN_3310010	0003610066	S	17	AATTCCATAGGCTGTGAGCTCTAGCAATGCCCTGTGGACTCAGTTCTGGT				10q24.32b	Homo sapiens microRNA 146b (MIR146B), microRNA.					
Homo sapiens	RefSeq	XM_938811.1	ILMN_35081	LOC649738	XM_938811.1	XM_938811.1		649738	88981276	XM_938811.1	LOC649738	XP_943904.1	ILMN_1695376	0007050088	S	127	CCCCGGAGGATGCGGCTTCCTCAAACAACACAGGCCCCAGACATTATACT					PREDICTED: Homo sapiens similar to Periphilin 1 (Gastric cancer antigen Ga50) (LOC649738), mRNA.					
Homo sapiens	Unigene	Hs.87194	ILMN_74019	HS.87194	Hs.87194		Hs.87194		21734106	AL833463			ILMN_1913641	0004250725	S	3505	GAAGACAAGTAGACGTTCTGCTGTCAAGACAGTCCATGTTATTGTTGGCC	15	-	53618550-53618599		Homo sapiens mRNA; cDNA DKFZp686P07116 (from clone DKFZp686P07116)					
Homo sapiens	RefSeq	NM_033535.2	ILMN_9807	FBXL5	NM_033535.2	NM_033535.2		26234	21536439	NM_033535.2	FBXL5	NP_277077.1	ILMN_1735051	0000110500	I	413	GTTGACTGGAAGCCTTACCAATAACATAAAACAATCGAATAACAATTATT	4	-	15643191-15643240	4p15.33a	Homo sapiens F-box and leucine-rich repeat protein 5 (FBXL5), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FBL4; FLR1; FBL5	FBL4; FLR1; FBL5
Homo sapiens	RefSeq	XM_929775.1	ILMN_32454	LOC646818	XM_929775.1	XM_929775.1		646818	89028002	XM_929775.1	LOC646818	XP_934868.1	ILMN_1663467	0001500471	S	242	ACCACAACATCGTTTCAGGACGGAGCGTCCTTCTCTTTGGGAAGCCTGAC	8	+	26924161-26924184:26924684-26924709		PREDICTED: Homo sapiens similar to serine palmitoyltransferase subunit 1 isoform b (LOC646818), mRNA.					
Homo sapiens	RefSeq	XM_930203.1	ILMN_35343	LOC647174	XM_930203.2	XM_930203.2		647174	113424172	XM_930203.2	LOC647174	XP_935296.2	ILMN_1667826	0000650019	S	930	GGGTACACTGTCCATGACAAAAGGGTGAAAGATTTCTTGCATGCTGTTTA	13	+	50813469-50813484:50816389-50816422	13q14.3c	PREDICTED: Homo sapiens nexin-related serine protease inhibitor (LOC647174), mRNA.					
Homo sapiens	RefSeq	XM_946090.1	ILMN_138438	SAPS2	XM_946090.1	XM_946090.1		9701	89059403	XM_946090.1	SAPS2	XP_951183.1	ILMN_1744035	0004860332	I	5	ACTAGAGAGATTGTGGTTCCCAAAGAGCAGCCTCCAGGCCTGATGCCTCC				22q13.33b	PREDICTED: Homo sapiens SAPS domain family, member 2, transcript variant 5 (SAPS2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NR_000026.1	ILMN_2807	RNU86	NR_000026.1	NR_000026.1		116936	22546031	NR_000026.1	RNU86		ILMN_3308310	0003400368	S	4	TGATGAAGGCCTGCACCTGGTCCCCTCCCCAACTCTGCTCTGCTCCTGAA	22	-	39712848-39712897	22q13.1d	Homo sapiens RNA, U86 small nucleolar (RNU86), small nucleolar RNA.				U82; U86	U82; U86
Homo sapiens	RefSeq	NM_181605.1	ILMN_23319	KRTAP6-3	NM_181605.3	NM_181605.3		337968	153945795	NM_181605.3	KRTAP6-3	NP_853636.3	ILMN_1728440	0003390494	S	230	GCCTGGACTGTGGCTATGGCTGTGGCTATGGCTATGTCTCCCACTCCTTC	21	+	30886859-30886908	21q22.11a	Homo sapiens keratin associated protein 6-3 (KRTAP6-3), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP6.3	KAP6.3
Homo sapiens	RefSeq	NM_014170.2	ILMN_27163	GTPBP8	NM_014170.2	NM_014170.2		29083	56549684	NM_014170.2	GTPBP8	NP_054889.2	ILMN_2286514	0000940168	I	431	GGCTTTATTTTCACTGGCCCCTGAGGTTGAAGTCAGAGTCTCCAAAAAAC	3	+	112711920-112711969	3q13.2b	Homo sapiens GTP-binding protein 8 (putative) (GTPBP8), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	HSPC135	HSPC135
Homo sapiens	RefSeq	NM_014170.2	ILMN_27163	GTPBP8	NM_014170.2	NM_014170.2		29083	56549684	NM_014170.2	GTPBP8	NP_054889.2	ILMN_2393243	0006620176	A	536	GGACATGCCAGGTTATGGCTTTAGAGCACCTGAAGATTTTGTTGACATGG	3	+	112714035-112714084	3q13.2b	Homo sapiens GTP-binding protein 8 (putative) (GTPBP8), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	HSPC135	HSPC135
Homo sapiens	RefSeq	NM_138485.1	ILMN_27163	GTPBP8	NM_014170.2	NM_014170.2		29083	56549684	NM_014170.2	GTPBP8	NP_054889.2	ILMN_1660698	0007000411	A	1278	ATGGGCTAGGTAAAAGGGGGCTGCTTTTCTGTTAAGCATCGATAGGTAAG	3	+	112720142-112720191	3q13.2b	Homo sapiens GTP-binding protein 8 (putative) (GTPBP8), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	HSPC135	HSPC135
Homo sapiens	RefSeq	NM_021216.3	ILMN_21431	ZNF71	NM_021216.3	NM_021216.3		58491	34147502	NM_021216.3	ZNF71	NP_067039.1	ILMN_1738793	0004050719	S	2774	AAGGGTGCTAATCCCAGTCACAAGGGCCCTGACCTCATGACCTCCCAAAG	19	+	61827031-61827080	19q13.43a	Homo sapiens zinc finger protein 71 (ZNF71), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EZFIT	EZFIT
Homo sapiens	Unigene	Hs.492496	ILMN_96554	HS.492496	Hs.492496		Hs.492496		18984731	BM674833			ILMN_1916094	0004830681	S	494	GTGCCTGAGAGGCCAAAAGAGAAAGAGAGGGTGAGCAGGAGAGCAAGCCG	8	+	106224747-106224796		UI-E-EJ0-ahm-h-09-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahm-h-09-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016628.2	ILMN_27950	WAC	NM_016628.2	NM_016628.2		51322	18379327	NM_016628.2	WAC	NP_057712.2	ILMN_2374692	0006660673	A	2775	TGCACCCTGTAAGAATGGACTTAAAAGTACTGCTGGACAGGCATGTGTGC	10	+	28949297-28949346	10p11.23c	Homo sapiens WW domain containing adaptor with coiled-coil (WAC), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	bA48B24; MGC10753; BM-016; Wwp4; PRO1741; bA48B24.1	bA48B24; MGC10753; BM-016; Wwp4; PRO1741; bA48B24.1
Homo sapiens	RefSeq	NM_207382.1	ILMN_21235	FLJ43276	NM_207382.1	NM_207382.1		388165	46409387	NM_207382.1	FLJ43276	NP_997265.1	ILMN_1696554	0003290121	I	1650	GATAGGAGACATTTTGCTTATGTTTTAAGGTATGTATTGGGTAGAGGAGC	15	-	82871881-82871902:82882767-82882794	15q25.2b	Homo sapiens FLJ43276 protein (FLJ43276), mRNA.					
Homo sapiens	RefSeq	NM_017869.3	ILMN_9555	BANP	NM_017869.3	NM_017869.3		54971	109698607	NM_017869.3	BANP	NP_060339.2	ILMN_2396338	0003360451	A	1302	AGCGAGGGCAACCTCCAGATCCATCACGTGGGGCAGGACGGTCAGGTGCT	16	+	86626496-86626501:86629080-86629118:86663176-86663180	16q24.2b	Homo sapiens BTG3 associated nuclear protein (BANP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	DKFZp761H172; FLJ10177; SMAR1; SMARBP1; FLJ20538	SMAR1; SMARBP1; DKFZp761H172; FLJ10177; FLJ20538
Homo sapiens	RefSeq	XM_928390.1	ILMN_31362	LOC645349	XM_928390.1	XM_928390.1		645349	88942729	XM_928390.1	LOC645349	XP_933483.1	ILMN_1651279	0006180274	S	3	GGCCGCCCATAGACCATTTGGCATGTACTTCCTCCCCTCTGAGGTCCATA	1	+	53393313-53393362		PREDICTED: Homo sapiens hypothetical protein LOC645349 (LOC645349), mRNA.					
Homo sapiens	RefSeq	XM_933940.1	ILMN_170920	FBXO10	NM_012166.2	NM_012166.2		26267	124244082	NM_012166.2	FBXO10	NP_036298.2	ILMN_1716952	0005820438	A	2052	ATGGCCTGTATGGAGTGGCAGTATTTAGCCAGAAGGATGGCTCCAGCGAG	9	-	37531331-37531380	9p13.2a	Homo sapiens F-box protein 10 (FBXO10), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531037] [evidence NAS]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531037] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531037] [evidence NAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ41992; MGC149840; FBX10	
Homo sapiens	RefSeq	NM_012166.2	ILMN_170920	FBXO10	NM_012166.2	NM_012166.2		26267	124244082	NM_012166.2	FBXO10	NP_036298.2	ILMN_2089616	0006180632	S	4278	TCACTGTCGTGCACTTGGCTGCGTGGCTGGTTCTATTGGCCCTAGGTGCT	9	-	37516073-37516082:37518122-37518161	9p13.2a	Homo sapiens F-box protein 10 (FBXO10), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531037] [evidence NAS]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531037] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531037] [evidence NAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ41992; MGC149840; FBX10	FLJ41992; MGC149840; FBX10
Homo sapiens	RefSeq	NM_014926.2	ILMN_11706	SLITRK3	NM_014926.2	NM_014926.2		22865	40217819	NM_014926.2	SLITRK3	NP_055741.2	ILMN_1736969	0000020037	S	3909	GCCGAAGACACACGCCTAGGGATGAGCACCCTCTTTGTGACACTTCATCC	3	-	166387465-166387514	3q26.1d	Homo sapiens SLIT and NTRK-like family, member 3 (SLITRK3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC138681; KIAA0848	MGC138681; KIAA0848
Homo sapiens	RefSeq	NR_003019.1	ILMN_171646	SNORA77	NR_003019.1	NR_003019.1		677843	92859606	NR_003019.1	SNORA77		ILMN_3243428	0002680040	S	48	TGTCTGCCAGAGAAACATTCCAGGGTGCTGTGGCTGCCTCACCTATCCAG	1	+	201965379-201965428	1q32.1e	Homo sapiens small nucleolar RNA, H/ACA box 77 (SNORA77), small nucleolar RNA.				ACA63	ACA63
Homo sapiens	RefSeq	NR_030617.1	ILMN_388135	MIR665	NR_030617.1	NR_030617.1		100126315	262206150	NR_030617.1	MIR665		ILMN_3310663	0004560608	S	5	TCGAGGGGTCTCTGCCTCTACCCAGGACTCTTTCATGACCAGGAGGCTGA				14q32.31a	Homo sapiens microRNA 665 (MIR665), microRNA.					
Homo sapiens	RefSeq	NM_016269.2	ILMN_30265	LEF1	NM_016269.2	NM_016269.2		51176	19923451	NM_016269.2	LEF1	NP_057353.1	ILMN_2213136	0004570255	S	2653	GTAATAGCCAAACCCCACTCTGTTGGTAGCAATTGGCAGCCCTATTTCAG	4	-	109188515-109188564	4q25b	Homo sapiens lymphoid enhancer-binding factor 1 (LEF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9308964] [evidence IC ]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 48341] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12192039] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9751710] [evidence IPI]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 9308964] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	TCF1ALPHA; DKFZp586H0919	TCF1ALPHA; DKFZp586H0919
Homo sapiens	RefSeq	NM_016269.2	ILMN_30265	LEF1	NM_016269.2	NM_016269.2		51176	19923451	NM_016269.2	LEF1	NP_057353.1	ILMN_1679185	0002810601	S	2576	GTGGCTTCTCTGTGAATTGCCTGTAACACATAGTGGCTTCTCCGCCCTTG	4	-	109188592-109188641	4q25b	Homo sapiens lymphoid enhancer-binding factor 1 (LEF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9308964] [evidence IC ]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus [goid 21542] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 48341] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12192039] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9751710] [evidence IPI]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 9308964] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	TCF1ALPHA; DKFZp586H0919	TCF1ALPHA; DKFZp586H0919
Homo sapiens	RefSeq	NR_031582.1	ILMN_388512	MIR759	NR_031582.1	NR_031582.1		100313778	269846984	NR_031582.1	MIR759		ILMN_3310533	0003710674	S	20	CTGGCAGAGTGCAAACAATTTTGACTCAGATCTAAATGTTTGCACTGGCT					Homo sapiens microRNA 759 (MIR759), microRNA.					
Homo sapiens	RefSeq	NM_002778.1	ILMN_179975	PSAP	NM_001042465.1	NM_001042465.1		5660	110224475	NM_001042465.1	PSAP	NP_001035930.1	ILMN_1749109	0007650333	S	2712	TGGTTGCCAGGAGACAGCAAGCAAAGCCAGCAGGACATGAAGTTGCTATT	10	-	73576124-73576173	10q22.1e	Homo sapiens prosaposin (PSAP), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1454804] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1454804] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving glycosphingolipids, any compound with residues of sphingoid and at least one monosaccharide [goid 6687] [pmid 1454804] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [pmid 1454804] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]	Increases the activity of an enzyme [goid 8047] [pmid 2717620] [evidence TAS]; Interacting selectively with a lipid [goid 8289] [pmid 1454804] [evidence TAS]	GLBA; SAP1; MGC110993; FLJ00245	GLBA; SAP1; MGC110993; FLJ00245
Homo sapiens	RefSeq	NM_001005861.1	ILMN_13061	RYK	NM_001005861.1	NM_001005861.1		6259	54607019	NM_001005861.1	RYK	NP_001005861.1	ILMN_1769671	0001090523	A	2628	GGCAGAAATTAGCCTTTCTGTGAACCAGATGTGGTTTGGGGCAGATCTGT	3	-	135358930-135358979	3q22.1e	Homo sapiens RYK receptor-like tyrosine kinase (RYK), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8386829] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8726462] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8386829] [evidence TAS]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 8386829] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with Wnt-protein, a secreted growth factor involved in signaling [goid 17147] [evidence IEA]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [evidence IEA]	JTK5; RYK1; D3S3195; JTK5A	JTK5; RYK1; D3S3195; JTK5A
Homo sapiens	RefSeq	NM_015285.2	ILMN_164975	WDR7	NM_015285.2	NM_015285.2		23335	73747876	NM_015285.2	WDR7	NP_056100.2	ILMN_1689029	0002230148	A	6727	GAGGAGCAATAGCCCTGGGCCACAAGCGTGGGTAGGCCTTTCACGTATTC	18	+	52847479-52847528	18q21.31a	Homo sapiens WD repeat domain 7 (WDR7), transcript variant 1, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	TRAG; KIAA0541	TRAG; KIAA0541
Homo sapiens	RefSeq	NM_015285.2	ILMN_164975	WDR7	NM_015285.2	NM_015285.2		23335	73747876	NM_015285.2	WDR7	NP_056100.2	ILMN_2383516	0003460292	A	6787	GGCAACCAAGGCCAGTAGAAAGCTATGGCTGCAAAACCCTGGGGTGGACG	18	+	52847539-52847588	18q21.31a	Homo sapiens WD repeat domain 7 (WDR7), transcript variant 1, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	TRAG; KIAA0541	TRAG; KIAA0541
Homo sapiens	RefSeq	NM_015285.2	ILMN_164975	WDR7	NM_015285.2	NM_015285.2		23335	73747876	NM_015285.2	WDR7	NP_056100.2	ILMN_2281167	0000610681	I	3061	TGCTGCACCTGTCGTTTCCGCTCGGTCTGATGCTGATCACTCTGGCTCTG	18	+	52595012-52595061	18q21.31a	Homo sapiens WD repeat domain 7 (WDR7), transcript variant 1, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	TRAG; KIAA0541	TRAG; KIAA0541
Homo sapiens	RefSeq	NM_004172.3	ILMN_164022	SLC1A3	NM_004172.3	NM_004172.3		6507	34222301	NM_004172.3	SLC1A3	NP_004163.2	ILMN_1738552	0004210403	S	3802	TATGGAAAGGTCCTGTGGGGAGCCCATCATCTCGCCAAGCCATCACAGGC	5	+	36724057-36724106	5p13.2b	Homo sapiens solute carrier family 1 (glial high affinity glutamate transporter), member 3 (SLC1A3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7521911] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The directed movement of neurotransmitters into neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters. It does not occur during cholinergic synaptic transmission. Instead, acetylcholine is enzymatically degraded in the synaptic cleft [goid 1504] [pmid 8647279] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 7521911] [evidence TAS]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [pmid 7521911] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid [goid 5313] [pmid 7521911] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]	GLAST; EA6; FLJ25094; EAAT1; GLAST1	GLAST; EA6; FLJ25094; EAAT1; GLAST1
Homo sapiens	RefSeq	NM_024734.3	ILMN_363754	CLMN	NM_024734.3	NM_024734.3		79789	197116349	NM_024734.3	CLMN	NP_079010.2	ILMN_3251242	0005820246	S	12076	TTGTGTAGAATGTCCCTGGGGTAGGGGCGGTAGCTGTGGGGAGGGAATGT	14	-	95648900-95648949	14q32.13b	Homo sapiens calmin (calponin-like, transmembrane) (CLMN), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Homo sapiens	Unigene	Hs.573555	ILMN_125736	HS.573555	Hs.573555		Hs.573555		27829104	BX097967			ILMN_1851356	0002690653	S	412	GCTTAGGGAACATACCAGAGGCCAAGTTCTCAGGGGCCATCTCCCAAACC					BX097967 NCI_CGAP_Gas4 Homo sapiens cDNA clone IMAGp998B085283, mRNA sequence					
Homo sapiens	RefSeq	NM_003798.1	ILMN_9279	CTNNAL1	NM_003798.1	NM_003798.1		8727	4503128	NM_003798.1	CTNNAL1	NP_003789.1	ILMN_2136446	0000940722	S	2012	CTCCTGGAAATAAACAAGCTAATTCCTCTATGCCACCAGCTCCAGACAGT	9	-	110745839-110745888	9q31.3a	Homo sapiens catenin (cadherin-associated protein), alpha-like 1 (CTNNAL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IEA]	CLLP; alpha-CATU	CLLP; alpha-CATU
Homo sapiens	RefSeq	NM_001414.2	ILMN_21641	EIF2B1	NM_001414.2	NM_001414.2		1967	77404351	NM_001414.2	EIF2B1	NP_001405.1	ILMN_1753716	0006520682	S	1355	AGCCCAAGTCCACCTGTCTTCATCCTCCCCTGCACTCCAGACTGATCTGC	12	-	122671912-122671961	12q24.31d	Homo sapiens eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa (EIF2B1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9235896] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 15060152] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9235896] [evidence IDA]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [pmid 16289705] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 12499492] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence ISS]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [pmid 15217090] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence ISS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 51716] [pmid 8626696] [evidence IDA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 16289705] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 11323413] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9235896] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9235896] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	EIF-2B; MGC125868; MGC117409; MGC125869; EIF2BA; EIF2B; EIF-2Balpha	EIF-2B; MGC125868; MGC117409; MGC125869; EIF2BA; EIF2B; EIF-2Balpha
Homo sapiens	RefSeq	XR_016651.1	ILMN_166914	LOC338598	XR_016651.1	XR_016651.1		338598	113421503	XR_016651.1	LOC338598		ILMN_3236026	0005910376	S	1516	ACTCACGGATGTTGTTATTCATGAGGACCAATGGATTGGTGAGACAGTAC	10	+	48708919-48708926:48714414-48714455	10q11.22c	PREDICTED: Homo sapiens misc_RNA (LOC338598), miscRNA.					
Homo sapiens	RefSeq	NM_001003785.1	ILMN_29612	ATP5H	NM_001003785.1	NM_001003785.1		10476	51479151	NM_001003785.1	ATP5H	NP_001003785.1	ILMN_1794912	0003450743	A	275	GAGAAGAAGGTGAAATCTTGTGCTGAGTGGGTGTCTCTCTCAAAGGCCAG	17	-	73035325-73035366:73038276-73038283	17q25.1c	Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d (ATP5H), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 12110673] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12110673] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	ATPQ; ATP5JD	ATP5JD; ATPQ
Homo sapiens	RefSeq	NM_003641.2	ILMN_24466	IFITM1	NM_003641.3	NM_003641.3		8519	150010588	NM_003641.3	IFITM1	NP_003632.3	ILMN_1801246	0005360156	S	619	GGCTGTTGCCCCTGCCCCCTTGGTCCTGCCCCTAGATACAGCAGTTTATA	11	+	305174-305223	11p15.5d	Homo sapiens interferon induced transmembrane protein 1 (9-27) (IFITM1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7559564] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism [goid 9607] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism [goid 9607] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7559564] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7559564] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism [goid 9607] [evidence IEA]	 [goid 5057] [pmid 7559564] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	LEU13; 9-27; CD225; IFI17	LEU13; 9-27; CD225; IFI17
Homo sapiens	RefSeq	NM_001684.3	ILMN_4015	ATP2B4	NM_001684.3	NM_001684.3		493	48255956	NM_001684.3	ATP2B4	NP_001675.3	ILMN_2367753	0006900630	A	8036	GCCTCTTCCTCTGAATAGACCAGACGCCCTTTCACTTAGTTCAGTGCCAG	1	+	201979139-201979188	1q32.1e	Homo sapiens ATPase, Ca++ transporting, plasma membrane 4 (ATP2B4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2137451] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10748016] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2137451] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 2137451] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11274188] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12763866] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11274188] [evidence IPI]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]	DKFZp686M088; PMCA4b; DKFZp686G08106; PMCA4x; PMCA4; ATP2B2; MXRA1	DKFZp686M088; PMCA4b; DKFZp686G08106; PMCA4x; PMCA4; ATP2B2; MXRA1
Homo sapiens	RefSeq	NM_004797.2	ILMN_183738	ADIPOQ	NM_004797.2	NM_004797.2		9370	44890057	NM_004797.2	ADIPOQ	NP_004788.1	ILMN_1775045	0004200471	S	4112	TTTGACAGACTCTCGTTCTGTGGCCCTGGCTGGAGTTCAGTGGTGTGATC	3	+	186575786-186575835	3q27.3a	Homo sapiens adiponectin, C1Q and collagen domain containing (ADIPOQ), mRNA.				APM1; GBP28; ACRP30; adiponectin; ACDC; APM-1	APM1; GBP28; ACRP30; adiponectin; ACDC; APM-1
Homo sapiens	RefSeq	NR_002915.1	ILMN_32235	SNORA74A	NR_002915.1	NR_002915.1		26821	86604707	NR_002915.1	SNORA74A		ILMN_3236224	0004480544	S	3	CCAGCGGTTGTCAGCTATCCAGGCTCATGTGGTGCCTGTGATGGTGTTAC	5	+	138614471-138614520	5q31.2d	Homo sapiens small nucleolar RNA, H/ACA box 74A (SNORA74A), small nucleolar RNA.				U19; RNU19	U19; RNU19
Homo sapiens	RefSeq	XR_038816.1	ILMN_345040	LOC644256	XR_038816.1	XR_038816.1		644256	169211342	XR_038816.1	LOC644256		ILMN_3210817	0003390095	A	1	ATGCAGTCCAAGCGGGATTGTGAGCTGTGGTGTGAGAGGGTGAAGGCGGC				17q21.31e	PREDICTED: Homo sapiens misc_RNA (LOC644256), miscRNA.					
Homo sapiens	RefSeq	XR_015212.2	ILMN_183360	LOC727962	XR_015212.2	XR_015212.2		727962	169215468	XR_015212.2	LOC727962		ILMN_3212424	0001430739	A	1023	CGACATTGCTAATGATACCGACAAGGCACGCTAACGCGGACACTGTACAC	22	+	17117450-17117499	22q11.21b	PREDICTED: Homo sapiens hypothetical LOC727962 (LOC727962), mRNA.					
Homo sapiens	RefSeq	NM_005370.4	ILMN_8881	RAB8A	NM_005370.4	NM_005370.4		4218	40548385	NM_005370.4	RAB8A	NP_005361.2	ILMN_1760858	0007150678	S	1853	GCTGACCGCACAGCAGTCTGGCTTGATTTTCAGCCGTCATCATTGGGTTC	19	+	16105121-16105170	19p13.12a-p13.11f	Homo sapiens RAB8A, member RAS oncogene family (RAB8A), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAB8; MEL	RAB8; MEL
Homo sapiens	RefSeq	XM_087386.8	ILMN_306841	HEG1	NM_020733.1	NM_020733.1		57493	153792109	NM_020733.1	HEG1	NP_065784.1	ILMN_1666122	0003290347	S	8565	CCAAAGGGGGACCATTCAGGTCTAAAAAGCGACAGGTCCGAGACTGGGTC	3	-	126167785-126167834	3q21.2b	Homo sapiens HEG homolog 1 (zebrafish) (HEG1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA1237; MST112; MSTP112; HEG	
Homo sapiens	RefSeq	NM_032491.3	ILMN_21969	RFX4	NM_032491.3	NM_032491.3		5992	47132525	NM_032491.3	RFX4	NP_115880.2	ILMN_1669370	0006180292	I	100	TGGCAAAATGAACTGGGCTGCCTTCGGAGGGTCTGAATTCTTCATCCCAG	12	+	105602715-105602721:105602722-105602764	12q23.3c	Homo sapiens regulatory factor X, 4 (influences HLA class II expression) (RFX4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	NYD-SP10	NYD-SP10
Homo sapiens	RefSeq	XR_001416.1	ILMN_37636	LOC400713	XR_001416.1	XR_001416.1		400713	89057687	XR_001416.1	LOC400713		ILMN_1745933	0002850224	I	2787	CTTTCACTGTGGTCTCTTGAATCAGTAGGATGCTGGGCGCGGTGGCTCCC				19q13.33e	PREDICTED: Homo sapiens zinc finger-like, transcript variant 3 (LOC400713), misc RNA.					
Homo sapiens	RefSeq	NM_000211.1	ILMN_138267	ITGB2	NM_000211.1	NM_000211.1		3689	4557885	NM_000211.1	ITGB2	NP_000202.1	ILMN_1654396	0007200156	S	2592	GGAGACTTGAGGAGGGCTTGAGGTTGGTGAGGTTAGGTGCGTGTTTCCTG	21	-	45130451-45130500	21q22.3e	Homo sapiens integrin, beta 2 (antigen CD18 (p95), lymphocyte function-associated antigen 1; macrophage antigen 1 (mac-1) beta subunit) (ITGB2), mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11857637] [evidence EXP]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 12885943] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 12885943] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12885943] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 1694220] [evidence TAS]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 12885943] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 12885943] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 12885943] [evidence NAS]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 12885943] [evidence NAS]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [pmid 12885943] [evidence IDA]; The migration of leukocytes from the blood vessels into the surrounding tissue [goid 45123] [evidence IEA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [pmid 12885943] [evidence IDA]; The expansion of a T cell population following activation by an antigenic stimulus [goid 50798] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12885943] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 12885943] [evidence IPI]	MAC-1; LFA-1; MF17; LCAMB; MFI7; LAD; CD18	MAC-1; LFA-1; MF17; LCAMB; MFI7; LAD; CD18
Homo sapiens	RefSeq	NM_000684.1	ILMN_26839	ADRB1	NM_000684.2	NM_000684.2		153	110349783	NM_000684.2	ADRB1	NP_000675.1	ILMN_1804255	0007050440	S	1589	GACCGATAGCAGGTGAACTCGAAGCCCACAATCCTCGTCTGAATCATCCG	10	+	115795384-115795433	10q25.3a	Homo sapiens adrenergic, beta-1-, receptor (ADRB1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10212248] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10212248] [evidence TAS]	The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IEA]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IEA]; The process that results in increased metabolic rate in tissues of an organism. It is triggered by the detection of dietary excess. This process is achieved via signalling in the sympathetic nervous system [goid 2024] [evidence IEA]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IEA]; Any homeostatic process by which an organism produces heat, thereby raising its internal temperature [goid 31649] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria [goid 50873] [evidence IEA]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IEA]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IEA]; The process that results in increased metabolic rate in tissues of an organism. It is triggered by the detection of dietary excess. This process is achieved via signalling in the sympathetic nervous system [goid 2024] [evidence IEA]; A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change [goid 2025] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 10212248] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IEA]; Any homeostatic process by which an organism produces heat, thereby raising its internal temperature [goid 31649] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40015] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria [goid 50873] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4940] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4940] [pmid 10212248] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16316992] [evidence IPI]	BETA1AR; B1AR; ADRB1R; RHR	BETA1AR; B1AR; ADRB1R; RHR
Homo sapiens	RefSeq	NM_173507.1	ILMN_20399	C1ORF127	NM_173507.1	NM_173507.1		148345	27735128	NM_173507.1	C1orf127	NP_775778.1	ILMN_1744089	0005260661	S	2063	CTGGCTTAGATGCCCAGCTGTGGCTGGGTACAGTGTTCTGGGCCGGAAGA	1	-	11006682-11006731	1p36.22b	Homo sapiens chromosome 1 open reading frame 127 (C1orf127), mRNA.				FLJ37118; FLJ37833	FLJ37118; FLJ37833
Homo sapiens	RefSeq	XM_001720144.1	ILMN_346159	LOC100132060	XM_001720144.1	XM_001720144.1		100132060	169163402	XM_001720144.1	LOC100132060	XP_001720196.1	ILMN_3244611	0004480176	S	632	AAAATGGAAACCCCAGAGAGGAGTCTGGGCAGGCGCCCAGGGTGCATGCT	2	-	161905457-161905506	2q24.2c	PREDICTED: Homo sapiens hypothetical protein LOC100132060 (LOC100132060), mRNA.					
Homo sapiens	RefSeq	NM_007277.3	ILMN_6110	EXOC3	NM_007277.4	NM_007277.4		11336	81295800	NM_007277.4	EXOC3	NP_009208.2	ILMN_1789419	0004730682	S	2458	GCTCCTTTTAGCTGCACGGCCTGTCTTTAGGTGCCAGTGTGATGCACCGG	5	+	467105-467154	5p15.33e	Homo sapiens exocyst complex component 3 (EXOC3), mRNA.		A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		SEC6L1; SEC6; Sec6p	SEC6; EXOC3; Sec6p
Homo sapiens	RefSeq	XM_932429.1	ILMN_40570	LOC644829	XM_932429.1	XM_932429.1		644829	89029835	XM_932429.1	LOC644829	XP_937522.1	ILMN_1652151	0006560382	S	216	CGTCTCCCTCCCGGGGCTCGCGCGCCCAGAACCCTCCGGTCTCAAGGAAG	9	+	70926049-70926098		PREDICTED: Homo sapiens hypothetical protein LOC644829 (LOC644829), mRNA.					
Homo sapiens	RefSeq	XM_942773.1	ILMN_33334	LOC642345	XM_942773.2	XM_942773.2		642345	113424482	XM_942773.2	LOC642345	XP_947866.1	ILMN_1653286	0006330014	S	187	GTTCTGGACATACACATGGGCAGAAGATGTAGCCGCCTTGTGTGAAAATT				13q31.2a	PREDICTED: Homo sapiens hypothetical LOC642345 (LOC642345), mRNA.					
Homo sapiens	RefSeq	NM_133325.1	ILMN_18932	PHF10	NM_133325.1	NM_133325.1		55274	19747275	NM_133325.1	PHF10	NP_579866.1	ILMN_1690138	0006020167	A	910	ACAGCTCCTCTGGCAATGTATCTGAAGGGGAAAGCCCTCCTGACAGCCAG	6	-	169852361-169852410	6q27f	Homo sapiens PHD finger protein 10 (PHF10), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	XAP135; FLJ10975; MGC111009	XAP135; FLJ10975; MGC111009
Homo sapiens	RefSeq	XM_932039.1	ILMN_46734	LOC644200	XM_932039.1	XM_932039.1		644200	89060220	XM_932039.1	LOC644200	XP_937132.1	ILMN_1664314	0006270687	S	241	AGTTGCAGGAAAACAAGGCTCAGGGTGCCTACTGATTCTACATTATGCTT	X	-	130665224-130665227:130671207-130671252		PREDICTED: Homo sapiens similar to hypothetical protein LOC286467 (LOC644200), mRNA.					
Homo sapiens	RefSeq	XM_001715674.1	ILMN_344063	LOC100131049	XM_001715674.1	XM_001715674.1		100131049	169216429	XM_001715674.1	LOC100131049	XP_001715726.1	ILMN_3286265	0004200079	M	139	GCGGCAGCCGCGGGCGGTCCCTGCGGCCGCCGCGGAAGGCCCCCGCTTCT				Xq26.2a	PREDICTED: Homo sapiens hypothetical protein LOC100131049 (LOC100131049), mRNA.					
Homo sapiens	RefSeq	NM_013272.2	ILMN_27392	SLCO3A1	NM_013272.2	NM_013272.2		28232	7706713	NM_013272.2	SLCO3A1	NP_037404.1	ILMN_1663699	0001240241	I	235	GAGCGGCGAGCTGCAGGGGGACGAGGCGCAGAGGAACAAGAAAAAGAAAA	15	+	90198184-90198233	15q26.1d	Homo sapiens solute carrier organic anion transporter family, member 3A1 (SLCO3A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	FLJ40478; SLC21A11; OATP-D; OATP3A1	FLJ40478; SLC21A11; OATP-D; OATP3A1
Homo sapiens	RefSeq	NM_013272.2	ILMN_27392	SLCO3A1	NM_013272.2	NM_013272.2		28232	7706713	NM_013272.2	SLCO3A1	NP_037404.1	ILMN_1678928	0005690491	A	1846	CATGGCACAGACACCCTCAGTCATCATCCTCATCAGGACAGTCAGCCCTG	15	+	90491358-90491393:90495184-90495197	15q26.1d	Homo sapiens solute carrier organic anion transporter family, member 3A1 (SLCO3A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	FLJ40478; SLC21A11; OATP-D; OATP3A1	FLJ40478; SLC21A11; OATP-D; OATP3A1
Homo sapiens	RefSeq	XM_941061.1	ILMN_27392	SLCO3A1	NM_013272.2	NM_013272.2		28232	7706713	NM_013272.2	SLCO3A1	NP_037404.1	ILMN_1654735	0002470092	A	2065	CCTGTATGTCAGCATCGCCATCGCGCTCAAATCCTTCGCCTTCATCCTGT	15	+	90507108-90507157	15q26.1d	Homo sapiens solute carrier organic anion transporter family, member 3A1 (SLCO3A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	FLJ40478; SLC21A11; OATP-D; OATP3A1	
Homo sapiens	RefSeq	NM_020372.2	ILMN_10641	SLC22A17	NM_020372.2	NM_020372.2		51310	21361833	NM_020372.2	SLC22A17	NP_065105.2	ILMN_1748738	0002360403	I	1223	GCATCCTATCTTCCCCACAGTGTGGGCTCAACAAGGGAACCCCAACAGAG	14	-	23816421-23816421:23816669-23816717	14q11.2f	Homo sapiens solute carrier family 22, member 17 (SLC22A17), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	BOIT; BOCT; NGALR; hBOIT	BOIT; BOCT; NGALR; hBOIT
Homo sapiens	RefSeq	NM_001814.2	ILMN_14007	CTSC	NM_001814.2	NM_001814.2		1075	22538438	NM_001814.2	CTSC	NP_001805.1	ILMN_2242463	0003450138	I	1420	TCCGCAGAGGAACTGATGAGTGTGCAATTGAGAGCATAGCAGTGGCAGCC	11	-	87666842-87666891	11q14.2b	Homo sapiens cathepsin C (CTSC), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 7665576] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9092576] [evidence TAS]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	JPD; DPP1; JP; HMS; CPPI; PALS; PLS; DPPI	JPD; DPP1; JP; HMS; CPPI; PALS; PLS; DPPI
Homo sapiens	RefSeq	NM_001814.2	ILMN_14007	CTSC	NM_001814.2	NM_001814.2		1075	22538438	NM_001814.2	CTSC	NP_001805.1	ILMN_1696347	0005270367	I	1345	CAGCCTCTGGGATGGATTACTGGATTGTTAAAAACAGCTGGGGCACCGGC	11	-	87666917-87666966	11q14.2b	Homo sapiens cathepsin C (CTSC), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 7665576] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9092576] [evidence TAS]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	JPD; DPP1; JP; HMS; CPPI; PALS; PLS; DPPI	JPD; DPP1; JP; HMS; CPPI; PALS; PLS; DPPI
Homo sapiens	RefSeq	NM_001814.2	ILMN_14007	CTSC	NM_001814.2	NM_001814.2		1075	22538438	NM_001814.2	CTSC	NP_001805.1	ILMN_1792885	0002640768	A	172	ACACACCTGCCAACTGCACCTATCTTGACCTGCTGGGCACCTGGGTCTTC	11	-	87710365-87710414	11q14.2b	Homo sapiens cathepsin C (CTSC), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 7665576] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9092576] [evidence TAS]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	JPD; DPP1; JP; HMS; CPPI; PALS; PLS; DPPI	JPD; DPP1; JP; HMS; CPPI; PALS; PLS; DPPI
Homo sapiens	RefSeq	NM_020786.1	ILMN_9168	PDP2	NM_020786.1	NM_020786.1		57546	41349496	NM_020786.1	PDP2	NP_065837.1	ILMN_1797965	0000940600	S	2951	GGAGGGAGGAGTGAGACTTATCAGATGGGACGCTTGCCCCAAGACTGTGG	16	+	65478477-65478526	16q22.1a	Homo sapiens pyruvate dehyrogenase phosphatase catalytic subunit 2 (PDP2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the reaction: [pyruvate dehydrogenase (lipoamide)] phosphate + H2O = [pyruvate dehydrogenase (lipoamide)] + phosphate [goid 4741] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	KIAA1348	KIAA1348
Homo sapiens	RefSeq	XM_945277.1	ILMN_138300	CDV3	XM_945277.1	XM_945277.1		55573	88970913	XM_945277.1	CDV3	XP_950370.1	ILMN_1710597	0005260239	I	10	GCAGCCGCATTTGTAGCAGCTCTTTTGTGATGACTTAGTCTCTAAGCCCG				3q22.1d	PREDICTED: Homo sapiens CDV3 homolog (mouse), transcript variant 5 (CDV3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10497265] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10497265] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10497265] [evidence ND ]		
Homo sapiens	RefSeq	NM_005096.2	ILMN_26001	ZMYM3	NM_005096.2	NM_005096.2		9203	42475939	NM_005096.2	ZMYM3	NP_005087.1	ILMN_2244004	0001300673	I	7	TTTGAATGAGAGGAGGGGATCACGGGTAGAGTGGGCTCCAGGAGGTAGGG	X	-	70474367-70474416	Xq13.1c	Homo sapiens zinc finger, MYM-type 3 (ZMYM3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10486218] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10486218] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF261; DXS6673E; XFIM; MYM; KIAA0385; ZNF198L2	ZNF261; DXS6673E; XFIM; MYM; KIAA0385; ZNF198L2
Homo sapiens	RefSeq	NM_152762.1	ILMN_3391	TSGA10IP	NM_152762.2	NM_152762.2		254187	154759272	NM_152762.2	TSGA10IP	NP_689975.2	ILMN_1765427	0002970553	S	1531	TGTCTGAGGCAGGAAAGGTGGACAGAGAGGGCACCCCCAGGAAACCCAGG	11	+	65483313-65483361:65483864-65483864	11q13.1d	Homo sapiens testis specific, 10 interacting protein (TSGA10IP), mRNA.				MGC120468; MGC120465; MGC120466; FLJ32880	MGC120468; MGC120465; MGC120466; FLJ32880
Homo sapiens	RefSeq	XM_946253.1	ILMN_166855	THOC4	XM_001134346.1	XM_001134346.1		10189	113427621	XM_001134346.1	THOC4	XP_001134346.1	ILMN_1750518	0000460286	A	439	TCGCTCTGGTCGCAGCTTAGGAACAGCAGACGTGCACTTTGAGCGGAAGG				17q25.3g	PREDICTED: Homo sapiens THO complex 4 (THOC4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15047853] [evidence IPI]		
Homo sapiens	RefSeq	NM_005002.3	ILMN_6998	NDUFA9	NM_005002.3	NM_005002.3		4704	39725687	NM_005002.3	NDUFA9	NP_004993.1	ILMN_1760741	0004810224	S	1021	CCTTGGTATTCAGGCAACACCACTGGAACTCAAGGCCATTGAGGTGCTGC	12	+	4666412-4666461	12p13.32a	Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa (NDUFA9), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 17209039] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8486360] [evidence IDA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 8486360] [evidence NAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [pmid 11112787] [evidence IMP]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [pmid 8486360] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 8486360] [evidence NAS]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	MGC111043; NDUFS2L	MGC111043; NDUFS2L
Homo sapiens	RefSeq	XM_945303.1	ILMN_46377	LOC652226	XM_945303.1	XM_945303.1		652226	88971302	XM_945303.1	LOC652226	XP_950396.1	ILMN_1759344	0001570307	S	1029	TGGCTGGGCCATGTAGACTGCCTCCTCCATGAGTTTGCCAGCTTTTTGAG					PREDICTED: Homo sapiens hypothetical protein LOC652226 (LOC652226), mRNA.					
Homo sapiens	RefSeq	NM_015399.3	ILMN_18305	BRMS1	NM_015399.3	NM_015399.3		25855	68348700	NM_015399.3	BRMS1	NP_056214.1	ILMN_1719165	0004810129	I	912	ACCCTCAGAGCAGCTGGCACTGCACCCAGGATTCTCGTCTTCCTCCTGCA	11	-	66105279-66105328	11q13.1e	Homo sapiens breast cancer metastasis suppressor 1 (BRMS1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16919237] [evidence IPI]	DKFZp564A063	DKFZp564A063
Homo sapiens	RefSeq	NM_004781.3	ILMN_165985	VAMP3	NM_004781.3	NM_004781.3		9341	42544205	NM_004781.3	VAMP3	NP_004772.1	ILMN_1714527	0004640066	S	1946	ACTGTTGAAGAGATGCCTTGCGGTGTGGCCAGCTGTGAGGAGAAAGCAGC	1	+	7763820-7763869	1p36.23b	Homo sapiens vesicle-associated membrane protein 3 (cellubrevin) (VAMP3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9885218] [evidence TAS]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9885218] [evidence TAS]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [pmid 9885218] [evidence TAS]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 9885218] [evidence TAS]		CEB	CEB
Homo sapiens	RefSeq	XM_001724213.1	ILMN_339508	LOC100128788	XM_001724213.1	XM_001724213.1		100128788	169210611	XM_001724213.1	LOC100128788	XP_001724265.1	ILMN_3258313	0002760167	M	333	TGGAAAGGGCAGGTGAGGAAGGTGAGGCTGGAGGGGACCCAAGAAGGGAT				16p13.3d	PREDICTED: Homo sapiens hypothetical protein LOC100128788 (LOC100128788), mRNA.					
Homo sapiens	RefSeq	NR_002179.1	ILMN_14322	TTTY17C	NR_002179.1	NR_002179.1		474152	54312061	NR_002179.1	TTTY17C		ILMN_3244082	0002710270	S	2	ATGCCTTGTTGAGCTTTGAAGCACATTGAGAAGAATCTGAAATCCTTCCT	Y	-	27330869-27330918	Yq11.23a	Homo sapiens testis-specific transcript, Y-linked 17C (non-protein coding) (TTTY17C), non-coding RNA.					
Homo sapiens	RefSeq	XM_943843.1	ILMN_33265	LOC649680	XM_943843.1	XM_943843.1		649680	89036199	XM_943843.1	LOC649680	XP_948936.1	ILMN_1695442	0002710685	S	675	CAGGAGCGCTGGTGAGCTTCCTACTGTGCCACAAGCTGGGTCTTACTGGG					PREDICTED: Homo sapiens hypothetical protein LOC649680 (LOC649680), mRNA.					
Homo sapiens	RefSeq	NM_000079.1	ILMN_44443	CHRNA1	NM_000079.2	NM_000079.2		1134	87567780	NM_000079.2	CHRNA1	NP_000070.1	ILMN_1798700	0004120717	S	1349	CCTCGGAGTCTTCATGCTTGTTTGCATCATCGGAACCCTAGCCGTGTTTG	2	-	175321132-175321181	2q31.1g	Homo sapiens cholinergic receptor, nicotinic, alpha 1 (muscle) (CHRNA1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 7619526] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [pmid 9221765] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 7619526] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7619526] [evidence TAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [pmid 9221765] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [pmid 9221765] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [pmid 9221765] [evidence IMP]	 [goid 4889] [evidence IEA];  [goid 4889] [pmid 9221765] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [pmid 6688857] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [pmid 7619526] [evidence TAS]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IEA]	FCCMS; ACHRA; ACHRD; CHRNA; CMS2A; SCCMS	FCCMS; ACHRA; ACHRD; CHRNA; CMS2A; SCCMS
Homo sapiens	RefSeq	Hs.576917	ILMN_166051	LOC731742	XM_001133734.1	XM_001133734.1		731742	113422157	XM_001133734.1	LOC731742	XP_001133734.1	ILMN_1883492	0002370736	S	256	ATTCGGCCCACTGCAAAGCCACACACGTCGGATTTCTGGGGAAAAGGTGC					PREDICTED: Homo sapiens hypothetical protein LOC731742 (LOC731742), mRNA.					
Homo sapiens	RefSeq	NM_003017.3	ILMN_29649	SFRS3	NM_003017.3	NM_003017.3		6428	31377552	NM_003017.3	SFRS3	NP_003008.1	ILMN_2135232	0001090300	S	1748	GCAGCAACCTGGTTCTTAAACACAAAGTAAGTTGCCCATTAACAAATGGC	6	+	36678902-36678951	6p21.31a	Homo sapiens splicing factor, arginine/serine-rich 3 (SFRS3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2030943] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15169763] [evidence IPI]	SRp20	SRp20
Homo sapiens	RefSeq	NM_003017.3	ILMN_29649	SFRS3	NM_003017.3	NM_003017.3		6428	31377552	NM_003017.3	SFRS3	NP_003008.1	ILMN_1723212	0005900561	S	1536	CCCACTGTTACCATTGTTCTTATCCCATGGGAAGCAGTTGGTTACACGAT	6	+	36678690-36678739	6p21.31a	Homo sapiens splicing factor, arginine/serine-rich 3 (SFRS3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2030943] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15169763] [evidence IPI]	SRp20	SRp20
Homo sapiens	RefSeq	XR_016007.1	ILMN_183504	LOC729517	XR_016007.1	XR_016007.1		729517	113417771	XR_016007.1	LOC729517		ILMN_3239507	0004150441	S	241	CCCCGTGAAGAGTGAGCTTGTTGAGCGCTTCACTTCCGAGGAGCCCGCTC	6	-	157640974-157641023	6q25.3c	PREDICTED: Homo sapiens misc_RNA (LOC729517), miscRNA.					
Homo sapiens	RefSeq	NM_173489.4	ILMN_29980	HEATR7B2	NM_173489.4	NM_173489.4		133558	154240670	NM_173489.4	HEATR7B2	NP_775760.3	ILMN_3242934	0002810164	S	5120	GACAGAGAACAACTGACCACACGACTCCAAGCACTTCGTCAAGATCCGTG	5	-	41051262-41051311	5p13.1b-p13.1a	Homo sapiens HEAT repeat family member 7B2 (HEATR7B2), mRNA.				DKFZp781F0822	DKFZp781F0822
Homo sapiens	RefSeq	NM_173489.2	ILMN_29980	HEATR7B2	NM_173489.4	NM_173489.4		133558	154240670	NM_173489.4	HEATR7B2	NP_775760.3	ILMN_1719283	0007400176	S	5002	CCTCCACACACACTCCTTCACCTTCTTCACCAGCACCTGGGAGGTGATCA	5	-	41052609-41052658	5p13.1b-p13.1a	Homo sapiens HEAT repeat family member 7B2 (HEATR7B2), mRNA.				DKFZp781F0822	DKFZp781F0822
Homo sapiens	RefSeq	NM_022768.4	ILMN_1342	RBM15	NM_022768.4	NM_022768.4		64783	47933338	NM_022768.4	RBM15	NP_073605.4	ILMN_1666739	0000840292	S	3332	GGCTCACACAGCTTAAGAGTAGCTGTCTCTCAAACGTGCGCTCACAGTTG	1	+	110690727-110690776	1p13.3a	Homo sapiens RNA binding motif protein 15 (RBM15), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	OTT; FLJ12479; SPEN; OTT1; FLJ21943; MGC119584	OTT; FLJ12479; SPEN; OTT1; FLJ21943; MGC119584
Homo sapiens	RefSeq	NM_138340.3	ILMN_4359	ABHD3	NM_138340.3	NM_138340.3		171586	34304337	NM_138340.3	ABHD3	NP_612213.2	ILMN_1801767	0005050241	S	1229	GGTTTTCTGGAGGGAATCTGGCCAAGACAGTCCACTTACATGGATCGTGT	18	-	17485601-17485650	18q11.2a	Homo sapiens abhydrolase domain containing 3 (ABHD3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LABH3; MGC11259	LABH3; MGC11259
Homo sapiens	RefSeq	NM_000194.1	ILMN_182790	HPRT1	NM_000194.1	NM_000194.1		3251	4504482	NM_000194.1	HPRT1	NP_000185.1	ILMN_2056975	0006400270	S	921	TTGCACTATGAGCCTATAGACTATCAGTTCCCTTTGGGCGGATTGTTGTT	X	+	133461952-133462001	Xq26.2b	Homo sapiens hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome) (HPRT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 6300847] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 6300847] [evidence EXP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [evidence IEA]; Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis [goid 6168] [evidence IEA]; Any process that generates guanine, 2-amino-6-hydroxypurine, from derivatives of it without de novo synthesis [goid 6178] [evidence IEA]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]; The progression of the striatum over time from its initial formation until its mature state. The striatum is a large cluster of dopaminergic nerve cells, consisting of the caudate nucleus and the putamen, that controls movement, balance, and walking [goid 21756] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IEA]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 45964] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [pmid 9824441] [evidence IMP]; Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis [goid 6166] [pmid 9824441] [evidence IMP]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [pmid 16138897] [evidence IMP]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 45964] [pmid 8643611] [evidence IMP]; The chemical reactions and pathways involving hypoxanthine, 6-hydroxy purine, an intermediate in the degradation of adenylate. Its ribonucleoside is known as inosine and its ribonucleotide as inosinate [goid 46100] [pmid 9824441] [evidence IMP]; The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits [goid 51289] [pmid 9521733] [evidence IDA]	Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 10360366] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [pmid 9521733] [evidence IDA]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [pmid 6300847] [evidence EXP]; Catalysis of the reaction: IMP + diphosphate = hypoxanthine + 5-phospho-alpha-D-ribose 1-diphosphate or GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4422] [pmid 6300847] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8044844] [evidence IPI]	HPRT; HGPRT	HPRT; HGPRT
Homo sapiens	RefSeq	XM_941907.1	ILMN_32744	LOC652458	XM_941907.1	XM_941907.1		652458	89062813	XM_941907.1	LOC652458	XP_947000.1	ILMN_1718353	0003830520	S	418	ATGACTTATCAACAAGCAACACTGGGTCACCACATGATGCCAAAGCCCCC					PREDICTED: Homo sapiens similar to Transcriptional regulator ATRX (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX) (LOC652458), mRNA.					
Homo sapiens	RefSeq	XR_038113.1	ILMN_350859	LOC730379	XR_038113.1	XR_038113.1		730379	169170386	XR_038113.1	LOC730379		ILMN_3248051	0002340209	S	437	AGTAAGCAAGCTCTTTGGGCTCAACTCCTGCCCAGCTCAAAACCGCCTTT	7	-	56444119-56444168		PREDICTED: Homo sapiens misc_RNA (LOC730379), miscRNA.					
Homo sapiens	RefSeq	NM_201544.1	ILMN_15645	LGALS8	NM_201544.1	NM_201544.1		3964	42544190	NM_201544.1	LGALS8	NP_963838.1	ILMN_1669930	0001070592	I	3	CAAGGCTCCAGAGGCTGTGCAGGAGGCCGAGCTGGGTGGCGATCAGCGGC	1	+	234753702-234753751	1q43a	Homo sapiens lectin, galactoside-binding, soluble, 8 (LGALS8), transcript variant 3, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8692978] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 8692978] [evidence TAS]	Gal-8; PCTA-1; Po66-CBP; PCTA1	Gal-8; PCTA-1; Po66-CBP; PCTA1
Homo sapiens	RefSeq	XM_944848.1	ILMN_43235	LOC651655	XM_944848.1	XM_944848.1		651655	89037859	XM_944848.1	LOC651655	XP_949941.1	ILMN_1671628	0001440347	S	121	TGGATGTTCCGAAACCGCCAGGTGTGGGATCTGCGCCCCGACAGCCCCAC					PREDICTED: Homo sapiens similar to maternally expressed 3 (LOC651655), mRNA.					
Homo sapiens	RefSeq	NM_177551.3	ILMN_26372	GPR109A	NM_177551.3	NM_177551.3		338442	41152145	NM_177551.3	GPR109A	NP_808219.1	ILMN_1750497	0003830228	S	1122	GGTGAGCCATGGAGCCCCTCTTATCTGGGCCCAACCTCTCCTTAAATAAC	12	-	123186733-123186738:123186739-123186782	12q24.31c	Homo sapiens G protein-coupled receptor 109A (GPR109A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	HM74a; HM74b; PUMAG; Puma-g	HM74a; HM74b; PUMAG; Puma-g
Homo sapiens	RefSeq	NM_000510.2	ILMN_182373	FSHB	NM_000510.2	NM_000510.2		2488	66528900	NM_000510.2	FSHB	NP_000501.1	ILMN_2415393	0001400471	A	825	CTGCAGCAGTCTTCTGGTAGACTCTTGGGCCCTCTAGAGCAAGGTCAGCA	11	+	30212289-30212338	11p14.1a	Homo sapiens follicle stimulating hormone, beta polypeptide (FSHB), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8220432] [evidence TAS]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence NAS]; The chemical reactions and pathways resulting in the formation of progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants [goid 6701] [pmid 14557487] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8220432] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 14557487] [evidence IEP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence NAS]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [pmid 8220432] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 8220432] [evidence TAS]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IEA]	A gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland [goid 16913] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence NAS]		
Homo sapiens	RefSeq	NM_017578.2	ILMN_9116	ROPN1	NM_017578.2	NM_017578.2		54763	21359919	NM_017578.2	ROPN1	NP_060048.2	ILMN_1668766	0005420739	S	786	CATAATGGTGGGTCGCCCCGGATCCCGTTCAGCACCTTCCAGTTTCTCTA	3	-	125171656-125171705	3q21.1c	Homo sapiens ropporin, rhophilin associated protein 1 (ROPN1), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]	ROPN1A; DKFZp434B1222; ropporin; ODF6; RHPNAP1	ROPN1A; DKFZp434B1222; ropporin; ODF6; RHPNAP1
Homo sapiens	RefSeq	XM_932669.1	ILMN_30692	LOC645133	XM_932669.1	XM_932669.1		645133	88942708	XM_932669.1	LOC645133	XP_937762.1	ILMN_1776566	0005560735	S	61	ACCTGCCTAGACAGTAACGCCTTTCTACCTTGGCCTGCCATTTAGGGGTC	1	+	48288984-48289033		PREDICTED: Homo sapiens hypothetical protein LOC645133 (LOC645133), mRNA.					
Homo sapiens	RefSeq	XM_942413.1	ILMN_38010	LOC652771	XM_942413.1	XM_942413.1		652771	89077396	XM_942413.1	LOC652771	XP_947506.1	ILMN_1777299	0000150390	S	25	TTCTGTCTTTTAGGCCCTAATAACAACAATCCTCAAACCTCAGCTGTTCG					PREDICTED: Homo sapiens similar to general transcription factor II, i isoform 1 (LOC652771), mRNA.					
Homo sapiens	RefSeq	NM_033292.2	ILMN_10969	CASP1	NM_033292.2	NM_033292.2		834	73622114	NM_033292.2	CASP1	NP_150634.1	ILMN_1727762	0006400053	I	298	CATCTGGAAATTACCTTAATATGCAAGACTCTCAAGGAGTACTTTCTTCC	11	-	104903797-104903846	11q22.3b	Homo sapiens caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) (CASP1), transcript variant alpha, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12888622] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1373520] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 10353249] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12888622] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15107016] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [pmid 10799503] [evidence TAS]	IL1BC; ICE; P45	IL1BC; ICE; P45
Homo sapiens	Unigene	Hs.564221	ILMN_116925	HS.564221	Hs.564221		Hs.564221		11599633	BF514454			ILMN_1837692	0004670538	S	246	CTACCAGGTGCAGGAAATGCTCTCTAGTCTGGGCGTAGCCAAGCGCCTGA	11	+	75562248-75562297		UI-H-BW1-anf-b-07-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3081948 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006536.4	ILMN_25090	CLCA2	NM_006536.4	NM_006536.4		9635	51988882	NM_006536.4	CLCA2	NP_006527.1	ILMN_1803236	0006550521	S	3736	AGAAGAGGTCAGCAGGGAGATACTAACCTTTGGAAATGATTAGCTGGCTC	1	+	86694596-86694645	1p22.3c	Homo sapiens chloride channel, calcium activated, family member 2 (CLCA2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts [goid 15276] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	CaCC	CaCC
Homo sapiens	RefSeq	XR_042345.1	ILMN_352174	LOC728348	XR_042345.1	XR_042345.1		728348	169170018	XR_042345.1	LOC728348		ILMN_3306336	0005550110	M	25	AGGAACAGCTGGGCCTGCAGAGGCCGCCATGAGGGAGGCAGAGGCCGGGC	7	-	56407778-56407827	7p11.2b	PREDICTED: Homo sapiens misc_RNA (LOC728348), miscRNA.					
Homo sapiens	RefSeq	NM_145205.3	ILMN_23386	HMGB4	NM_145205.3	NM_145205.3		127540	57232749	NM_145205.3	HMGB4	NP_660206.2	ILMN_1785655	0001260041	I	1310	GAAGGCAGACCCCATGGCCTGTCACTACAGCCTAGGGATTTTAAGCCCCT	1	+	34101946-34101995	1p35.1a	Homo sapiens high-mobility group box 4 (HMGB4), transcript variant 1, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ40388; dJ1007G16.5; MGC88128	FLJ40388; dJ1007G16.5; MGC88128
Homo sapiens	RefSeq	XM_929824.1	ILMN_787	C11ORF85	NM_001037225.1	NM_001037225.1		283129	82524335	NM_001037225.1	C11orf85	NP_001032302.1	ILMN_1808914	0002680255	A	641	CTGCCAGGGCGAATTGTCCCACCCCTGCAGCACAACTCACCTCCACCTAA	11	-	64707169-64707218	11q13.1c	Homo sapiens chromosome 11 open reading frame 85 (C11orf85), mRNA.				MGC126364	
Homo sapiens	RefSeq	NM_001037225.1	ILMN_787	C11ORF85	NM_001037225.1	NM_001037225.1		283129	82524335	NM_001037225.1	C11orf85	NP_001032302.1	ILMN_2182850	0005340687	S	754	CAGGAAGAGCAGCCACTCTTGAGCCTTCCAAATGCAGCGCTGGAAAGAGG	11	-	64705968-64706017	11q13.1c	Homo sapiens chromosome 11 open reading frame 85 (C11orf85), mRNA.				MGC126364	MGC126364
Homo sapiens	RefSeq	XM_942311.1	ILMN_34357	LOC652699	XM_942311.1	XM_942311.1		652699	89077041	XM_942311.1	LOC652699	XP_947404.1	ILMN_1788768	0001770367	S	289	AAAGATGGCAAGAGTACCGCGACAGGTGAGAGGACGGGGGGCAGCCGGCG					PREDICTED: Homo sapiens similar to Neutrophil cytosol factor 1 (NCF-1) (Neutrophil NADPH oxidase factor 1) (47 kDa neutrophil oxidase factor) (p47-phox) (NCF-47K) (47 kDa autosomal chronic granulomatous disease protein) (NOXO2) (LOC652699), mRNA.					
Homo sapiens	Unigene	Hs.552282	ILMN_110926	HS.552282	Hs.552282		Hs.552282		60219582	CR936671			ILMN_1883937	0007200450	S	8103	CCAGCAACCATGCAAGTCTGGAGGCGAAGGGGTTGGAGAACCAAATGCCC	8	+	73026692-73026741		Homo sapiens mRNA; cDNA DKFZp313P0125 (from clone DKFZp313P0125)					
Homo sapiens	RefSeq	NM_001040092.1	ILMN_177018	ENPP2	NM_001040092.1	NM_001040092.1		5168	91823601	NM_001040092.1	ENPP2	NP_001035181.1	ILMN_2373791	0002490152	A	2543	CATGAAGATGCACACAGCTAGGGTGCGTGACATTGAACATCTCACCAGCC	8	-	120644414-120644434:120646244-120646272	8q24.12b	Homo sapiens ectonucleotide pyrophosphatase/phosphodiesterase 2 (ENPP2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8579579] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1733949] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 8579579] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 1733949] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 7982964] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 1733949] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [pmid 7982964] [evidence TAS]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [pmid 8579579] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 8586446] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [pmid 7982964] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanol-amine + 1-alkyl-sn-glycerol 3-phosphate [goid 47391] [evidence IEA]	NPP2; ATX; LysoPLD; ATX-X; PDNP2; PD-IALPHA; FLJ26803	NPP2; ATX; LysoPLD; ATX-X; PDNP2; PD-IALPHA; FLJ26803
Homo sapiens	RefSeq	NM_006209.2	ILMN_177018	ENPP2	NM_001040092.1	NM_001040092.1		5168	91823601	NM_001040092.1	ENPP2	NP_001035181.1	ILMN_1780799	0000840678	S	2603	CCGAAAGACCAGCCGCAGCTACCCAGAAATCCTGACACTCAAGACATACC	8	-	120644354-120644403	8q24.12b	Homo sapiens ectonucleotide pyrophosphatase/phosphodiesterase 2 (ENPP2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8579579] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1733949] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 8579579] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 1733949] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 7982964] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 1733949] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [pmid 7982964] [evidence TAS]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [pmid 8579579] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 8586446] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [pmid 7982964] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: H2O + 1-alkyl-sn-glycero-3-phosphoethanolamine = ethanol-amine + 1-alkyl-sn-glycerol 3-phosphate [goid 47391] [evidence IEA]	NPP2; ATX; LysoPLD; ATX-X; PDNP2; PD-IALPHA; FLJ26803	ATX; LysoPLD; PDNP2; PD-IALPHA
Homo sapiens	RefSeq	NM_001024452.2	ILMN_370931	GLRA4	NM_001024452.2	NM_001024452.2		441509	218156327	NM_001024452.2	GLRA4	NP_001019623.2	ILMN_3241921	0000940411	S	1608	ATAGTCCCCAACCTCCAGCCCCTCTTCTAAGGGAAGGAGAAACCACGCGG	X	-	102962289-102962338	Xq22.2a	Homo sapiens glycine receptor, alpha 4 (GLRA4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Homo sapiens	RefSeq	NM_015138.3	ILMN_1866	RTF1	NM_015138.3	NM_015138.3		23168	72086156	NM_015138.3	RTF1	NP_055953.1	ILMN_1791039	0006520551	S	4712	CCTCATTGGGCCCCTCCTCCCTCCACAGTGTGGTTTCAGTGTTGAAGGGT	15	+	39562758-39562807	15q15.1c	Homo sapiens Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (RTF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The covalent alteration of one or more amino acid residues within a histone protein [goid 16570] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; The covalent alteration of one or more amino acid residues within a histone protein [goid 16570] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	KIAA0252; GTL7	KIAA0252; GTL7
Homo sapiens	RefSeq	XM_928934.1	ILMN_45269	LOC645968	XM_928934.1	XM_928934.1		645968	89025345	XM_928934.1	LOC645968	XP_934027.1	ILMN_1695370	0001440121	S	1	TAAAAAGCCTTTTGGCTCTGACCAGCACCATGGCAGTTGGCAAGAACAAG	7	-	94163044-94163065:94163066-94163093	7q21.3b	PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC645968), mRNA.					
Homo sapiens	RefSeq	XM_378545.3	ILMN_31846	LOC400456	XM_378545.3	XM_378545.3		400456	89038674	XM_378545.3	LOC400456	XP_378545.2	ILMN_1782399	0006980392	I	134	CATCCACATGTTGGCTGTTGCTGTGTCTCCCTAAAGCAGACAGCATGCCT	15	-	93755213-93755262	15q26.2b	PREDICTED: Homo sapiens hypothetical gene supported by BC040875 (LOC400456), mRNA.					
Homo sapiens	RefSeq	XM_378545.3	ILMN_31846	LOC400456	XM_378545.3	XM_378545.3		400456	89038674	XM_378545.3	LOC400456	XP_378545.2	ILMN_1730768	0006560014	A	1377	GCACACAGAGGCGGAAGGACATAAAGTTCCTGGTTGATTTCCCTTTGGTG	15	-	93623657-93623706	15q26.2b	PREDICTED: Homo sapiens hypothetical gene supported by BC040875 (LOC400456), mRNA.					
Homo sapiens	RefSeq	NM_134259.1	ILMN_29136	TBL1Y	NM_134259.1	NM_134259.1		90665	19913366	NM_134259.1	TBL1Y	NP_599021.1	ILMN_2317524	0002000066	A	2237	CTTGTGTTAGAGTATATTCTGAAACCAACTTGTCCCAGGCCACAGGAGTG	Y	+	6953181-6953183:6953939-6953985	Yp11.2h-p11.2g	Homo sapiens transducin (beta)-like 1Y-linked (TBL1Y), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		TBL1	TBL1
Homo sapiens	RefSeq	NM_033284.1	ILMN_29136	TBL1Y	NM_134259.1	NM_134259.1		90665	19913366	NM_134259.1	TBL1Y	NP_599021.1	ILMN_1812328	0004050626	A	2170	CTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC	Y	+	6953114-6953125:6953126-6953163	Yp11.2h-p11.2g	Homo sapiens transducin (beta)-like 1Y-linked (TBL1Y), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		TBL1	TBL1
Homo sapiens	RefSeq	XM_001720532.1	ILMN_345132	LOC100133939	XM_001720532.1	XM_001720532.1		100133939	169217529	XM_001720532.1	LOC100133939	XP_001720584.1	ILMN_3243782	0006250377	S	108	GCGTCACTGCACCTATTTAGAAAATGGGATGCAGGATTCAAGGAAGAAAT					PREDICTED: Homo sapiens similar to UPF0634 protein KIAA1641 (LOC100133939), mRNA.					
Homo sapiens	RefSeq	NM_001002021.1	ILMN_26067	PFKL	NM_001002021.1	NM_001002021.1		5211	50346004	NM_001002021.1	PFKL	NP_001002021.1	ILMN_2287253	0004560373	I	543	TGGGAGCCGAGGGCAAGGGGACAGGAAAGAGGAAGTGACCTCAGAGCCTG	21	+	44550167-44550216	21q22.3d	Homo sapiens phosphofructokinase, liver (PFKL), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 6444721] [evidence EXP]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [pmid 6444721] [evidence IDA]	The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism [goid 6002] [pmid 6444721] [evidence IDA]; Any process that modulates the frequency, rate or extent of glycolysis [goid 6110] [pmid 6444721] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [pmid 6444721] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PFK-B; FLJ40909; FLJ30173; DKFZp686G1648; DKFZp686L2097	FLJ40909; DKFZp686G1648; PFK-B; FLJ30173; DKFZp686L2097
Homo sapiens	RefSeq	NM_003896.2	ILMN_181371	ST3GAL5	NM_001042437.1	NM_001042437.1		8869	109633045	NM_001042437.1	ST3GAL5	NP_001035902.1	ILMN_1713496	0005260403	S	1875	CTGACAACTGTGAAGCCACCCTGGGCTACAGAAACCACAGTCTTCCCAGC	2	-	86066583-86066632	2p11.2f	Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5 (ST3GAL5), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9822625] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9822625] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1574] [pmid 9822625] [evidence NAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9822625] [evidence TAS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-D-glucosylceramide [goid 4513] [pmid 9822625] [evidence TAS]; Catalysis of the reaction: cytolipin-H + CMP-N-acetylneuraminate = alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide + CMP. Alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide is also known as GM3 [goid 47291] [pmid 9822625] [evidence IDA]	SIAT9; ST3GalV; SIATGM3S	SIAT9; ST3GalV; SIATGM3S
Homo sapiens	RefSeq	NM_001042437.1	ILMN_181371	ST3GAL5	NM_001042437.1	NM_001042437.1		8869	109633045	NM_001042437.1	ST3GAL5	NP_001035902.1	ILMN_2388701	0003890382	A	1595	GGAGAGGGGAGGTCACTCTTTTGATGGTGGCCCTGAACCTCATTCTGGTT	2	-	86066863-86066912	2p11.2f	Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 5 (ST3GAL5), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9822625] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9822625] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1574] [pmid 9822625] [evidence NAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9822625] [evidence TAS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-D-glucosylceramide [goid 4513] [pmid 9822625] [evidence TAS]; Catalysis of the reaction: cytolipin-H + CMP-N-acetylneuraminate = alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide + CMP. Alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide is also known as GM3 [goid 47291] [pmid 9822625] [evidence IDA]	SIAT9; ST3GalV; SIATGM3S	SIAT9; ST3GalV; SIATGM3S
Homo sapiens	RefSeq	XM_001719666.1	ILMN_351180	LOC100129159	XM_001719666.1	XM_001719666.1		100129159	169172253	XM_001719666.1	LOC100129159	XP_001719718.1	ILMN_3271724	0000020255	M	219	ACCCATGCTGAGTGCCGTGGTGTGATCATGGCTTATTTCAACCTCAACCT				7p12.1a	PREDICTED: Homo sapiens hypothetical protein LOC100129159 (LOC100129159), mRNA.					
Homo sapiens	Unigene	Hs.580929	ILMN_133110	HS.580929	Hs.580929		Hs.580929		83137225	DB259922			ILMN_1908944	0006270576	S	156	CCAGCTCCAATTAGGGACCAGCCCAGAGGTCACCAAAAAGAGAAGGAGGT	21	+	27339708-27339751:27368848-27368853		DB259922 UTERU2 Homo sapiens cDNA clone UTERU2017075 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001033046.1	ILMN_306945	C17ORF62	NM_001100408.1	NM_001100408.1		79415	154350203	NM_001100408.1	C17orf62	NP_001093878.1	ILMN_1750401	0006560767	S	1725	CTGAACGCCAACCATCCTGACCCGCCAGTGCTCTTGGTCTCCTGAGTGTA	17	-	80400784-80400833	17q25.3g	Homo sapiens chromosome 17 open reading frame 62 (C17orf62), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC4368; FLJ00406; FLJ90469	FLJ00406; MGC4368; FLJ90469
Homo sapiens	RefSeq	NM_018206.3	ILMN_21093	VPS35	NM_018206.3	NM_018206.3		55737	41352714	NM_018206.3	VPS35	NP_060676.2	ILMN_1761721	0007200600	S	3029	TGCATATTTGGACTCAGCCATCCATTAAGAACCCATGTTGTCCTCTGGAC	16	-	45251244-45251293	16q11.2i	Homo sapiens vacuolar protein sorting 35 homolog (S. cerevisiae) (VPS35), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 11256614] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11102511] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [pmid 11102511] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11102511] [evidence IPI]	FLJ20388; MEM3; FLJ10752; DKFZp434E1211; FLJ13588; DKFZp434P1672	FLJ20388; MEM3; FLJ10752; DKFZp434E1211; FLJ13588; DKFZp434P1672
Homo sapiens	RefSeq	NM_017488.2	ILMN_181897	ADD2	NM_017488.2	NM_017488.2		119	89276791	NM_017488.2	ADD2	NP_059522.1	ILMN_2286339	0006040601	I	2229	AGGCTCTGGTCCGGCCGTGTGCGAGTTCTTCAGCGTTGCCCTCCACATCT	2	-	70900386-70900435	2p13.3c	Homo sapiens adducin 2 (beta) (ADD2), transcript variant beta-4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 1840603] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADDB	ADDB
Homo sapiens	RefSeq	NM_000285.1	ILMN_22829	PEPD	NM_000285.2	NM_000285.2		5184	149589007	NM_000285.2	PEPD	NP_000276.2	ILMN_1717674	0005670400	S	1687	TGGTCAGCACTCCAGTAGCGAGAGACGGCACCCAGAATCAGATCCCAGCT	19	-	38569970-38570019	19q13.11b	Homo sapiens peptidase D (PEPD), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1972707] [evidence TAS]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 1972707] [evidence TAS]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 1972707] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PROLIDASE; MGC10905	PROLIDASE; MGC10905
Homo sapiens	Unigene	Hs.59368	ILMN_73199	HS.59368	Hs.59368		Hs.59368		6504925	AW205453			ILMN_1851244	0007040424	S	599	GTCTGACTGGATGCTGGGGATGGTGTTAGAGCTGTCCAAAGGTGGCGGGA	3	+	71087150-71087199		UI-H-BI1-aex-h-12-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2720903 3, mRNA sequence					
Homo sapiens	RefSeq	XR_040514.1	ILMN_343408	LOC729681	XR_040514.1	XR_040514.1		729681	169169885	XR_040514.1	LOC729681		ILMN_3301878	0003450438	M	1592	GGGTTCGTGCTCCTATGAGAATCTGATGTTGCCACTGGTCTGACAGGAGG				6q27b	PREDICTED: Homo sapiens misc_RNA (LOC729681), miscRNA.					
Homo sapiens	RefSeq	NM_181738.1	ILMN_8956	PRDX2	NM_181738.1	NM_181738.1		7001	33188453	NM_181738.1	PRDX2	NP_859428.1	ILMN_1709584	0000840121	I	450	ACCCTCAGGTCCTAGCAGTGTGGCTTCGTGGCCATTGCTCAACCTCTGGA	19	-	12911637-12911686	19p13.13c	Homo sapiens peroxiredoxin 2 (PRDX2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 12943237] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 11904290] [evidence NAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 12943237] [evidence IMP]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [pmid 8144038] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	TDPX1; MGC4104; TSA; PRP; PRX2; NKEFB; PRXII	TDPX1; MGC4104; TSA; PRP; PRX2; NKEFB; PRXII
Homo sapiens	RefSeq	NM_181738.1	ILMN_8956	PRDX2	NM_181738.1	NM_181738.1		7001	33188453	NM_181738.1	PRDX2	NP_859428.1	ILMN_1767766	0006550064	A	206	CGGTGGTTGATGGCGCCTTCAAAGAGGTGAAGCTGTCGGACTACAAAGGG	19	-	12911881-12911883:12911973-12912019	19p13.13c	Homo sapiens peroxiredoxin 2 (PRDX2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 12943237] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 11904290] [evidence NAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 12943237] [evidence IMP]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [pmid 8144038] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	TDPX1; MGC4104; TSA; PRP; PRX2; NKEFB; PRXII	TDPX1; MGC4104; TSA; PRP; PRX2; NKEFB; PRXII
Homo sapiens	RefSeq	NM_181738.1	ILMN_8956	PRDX2	NM_181738.1	NM_181738.1		7001	33188453	NM_181738.1	PRDX2	NP_859428.1	ILMN_2382829	0005960674	A	218	GCGCCTTCAAAGAGGTGAAGCTGTCGGACTACAAAGGGAAGTACGTGGTC	19	-	12911869-12911883:12911973-12912007	19p13.13c	Homo sapiens peroxiredoxin 2 (PRDX2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 12943237] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 11904290] [evidence NAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 12943237] [evidence IMP]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [pmid 8144038] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	TDPX1; MGC4104; TSA; PRP; PRX2; NKEFB; PRXII	TDPX1; MGC4104; TSA; PRP; PRX2; NKEFB; PRXII
Homo sapiens	RefSeq	NM_138387.2	ILMN_15706	G6PC3	NM_138387.2	NM_138387.2		92579	46852181	NM_138387.2	G6PC3	NP_612396.1	ILMN_2127477	0000380242	S	1212	GCACATGTTCAGTGCCCAGGAAGCACCGCCCATCCACTCTTCCTGACTTC	17	+	39508892-39508937:39508938-39508941	17q21.31c	Homo sapiens glucose 6 phosphatase, catalytic, 3 (G6PC3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IEA]	Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	UGRP	UGRP
Homo sapiens	RefSeq	XR_037443.1	ILMN_333897	LOC100133990	XR_037443.1	XR_037443.1		100133990	169205087	XR_037443.1	LOC100133990		ILMN_3234860	0000160025	S	462	CTCTGCAAGACTCAGGAAATGCTCCCACAGCAAGACAGAAGACCTCAACC					PREDICTED: Homo sapiens misc_RNA (LOC100133990), miscRNA.					
Homo sapiens	RefSeq	XR_000539.1	ILMN_30887	FLJ37201	XR_000539.1	XR_000539.1		283011	89031559	XR_000539.1	FLJ37201		ILMN_1727099	0002480259	A	3289	CTGCTGCTAACTATCCCCTCAGCTCCGTGTGCCATAAGCACCACACAAAC	10	-	91441354-91441403	10q23.31c	PREDICTED: Homo sapiens hypothetical protein FLJ37201 (FLJ37201), misc RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	NR_030346.1	ILMN_388095	MIR616	NR_030346.1	NR_030346.1		693201	262206072	NR_030346.1	MIR616		ILMN_3308941	0006900386	S	30	GTGACTTCCATGACATGAAATAGGAAGTCATTGGAGGGTTTGAGCAGAGG				12q13.3b	Homo sapiens microRNA 616 (MIR616), microRNA.					
Homo sapiens	RefSeq	NM_002791.1	ILMN_17034	PSMA6	NM_002791.1	NM_002791.1		5687	23110943	NM_002791.1	PSMA6	NP_002782.1	ILMN_1704094	0007040470	S	215	GGCCTTACATCAGTAGCTGTCAGAGGGAAAGACTGTGCAGTAATTGTCAC	14	+	34846980-34847029	14q13.2a-q13.2b	Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6 (PSMA6), mRNA.	A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [pmid 1888762] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7681138] [evidence NAS]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15225636] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC22756; IOTA; MGC2333; p27K; PROS27; MGC23846	PROS27; MGC23846; MGC22756; IOTA; MGC2333; p27K
Homo sapiens	RefSeq	NM_002791.1	ILMN_17034	PSMA6	NM_002791.1	NM_002791.1		5687	23110943	NM_002791.1	PSMA6	NP_002782.1	ILMN_2151818	0005080326	S	852	CATTGTCGTTAGTTTACCAGATCCGTGATGCCACTTACCTGTGTGTTTGG	14	+	34856265-34856314	14q13.2a-q13.2b	Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6 (PSMA6), mRNA.	A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [pmid 1888762] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7681138] [evidence NAS]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15225636] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC22756; IOTA; MGC2333; p27K; PROS27; MGC23846	PROS27; MGC23846; MGC22756; IOTA; MGC2333; p27K
Homo sapiens	RefSeq	XM_495909.2	ILMN_46236	OVOS	XM_495909.2	XM_495909.2		408186	89066434	XM_495909.2	OVOS	XP_495909.2	ILMN_1739486	0005550102	S	44	ATATGATTCTTCTTCCTGACCAACAGTTTCCTGCTCTACGAAACGCACTC				12p13.31a	PREDICTED: Homo sapiens ovostatin (OVOS), mRNA.					
Homo sapiens	RefSeq	XM_941382.1	ILMN_40409	LOC652062	XM_941382.1	XM_941382.1		652062	89067152	XM_941382.1	LOC652062	XP_946475.1	ILMN_1808991	0000730735	S	1	ATGGAGCTGTCTTTCAGATCTTTCCTGGGATTACCCCTGCCTACCCCCAG					PREDICTED: Homo sapiens similar to Mitochondrial carnitine/acylcarnitine carrier protein (Carnitine/acylcarnitine translocase) (CAC) (LOC652062), mRNA.					
Homo sapiens	RefSeq	XM_939885.1	ILMN_34193	LOC650799	XM_939885.1	XM_939885.1		650799	89037607	XM_939885.1	LOC650799	XP_944978.1	ILMN_1715436	0000070431	S	268	AGTGGCCTCCCTGTTTATCCCTGCCGACAGAAAGTCCAGCACTCTGAGCC					PREDICTED: Homo sapiens similar to Ig lambda chain V-I region BL2 precursor (LOC650799), mRNA.					
Homo sapiens	RefSeq	NR_029614.1	ILMN_388205	MIR182	NR_029614.1	NR_029614.1		406958	262206242	NR_029614.1	MIR182		ILMN_3309560	0006590528	S	12	TCCCCCCGTTTTTGGCAATGGTAGAACTCACACTGGTGAGGTAACAGGAT				7q32.2a	Homo sapiens microRNA 182 (MIR182), microRNA.					
Homo sapiens	RefSeq	XM_946205.1	ILMN_33026	LOC388588	XM_932890.2	XM_932890.2		388588	113402674	XM_932890.2	LOC388588	XP_937983.1	ILMN_1749834	0001510017	A	598	GGCGTGGCCCTCTTCTGGATCATCTTCATCCTGGGCTACCTCACAGGCTA	1	+	3682274-3682323	1p36.32b	PREDICTED: Homo sapiens hypothetical LOC388588, transcript variant 2 (LOC388588), mRNA.					
Homo sapiens	RefSeq	NM_152265.1	ILMN_3105	BTF3L4	NM_152265.2	NM_152265.2		91408	142364993	NM_152265.2	BTF3L4	NP_689478.1	ILMN_1759359	0005490730	S	1669	TCCTCAACCACTCTCCTACTCTTGGCCTTGAACCTACCTCTGGGTTGGAT	1	+	52326118-52326167	1p32.3d	Homo sapiens basic transcription factor 3-like 4 (BTF3L4), mRNA.				MGC23908; MGC88389; RP4-800M22.5	MGC23908; MGC88389; RP4-800M22.5
Homo sapiens	RefSeq	XM_931214.1	ILMN_44054	LOC653105	XM_931214.1	XM_931214.1		653105	88944406	XM_931214.1	LOC653105	XP_936307.1	ILMN_1790715	0002320390	I	1	TGCCGACTCCATTTTGTCGGTAGAGGCAGAAGGAGAAGGTCGGGTTGTAG	1	+	29648-29697		PREDICTED: Homo sapiens similar to Proline-rich nuclear receptor coactivator 2, transcript variant 3 (LOC653105), mRNA.					
Homo sapiens	RefSeq	NM_004344.1	ILMN_5587	CETN2	NM_004344.1	NM_004344.1		1069	4757901	NM_004344.1	CETN2	NP_004335.1	ILMN_1695645	0002120707	S	827	GAGCACCTGCCATTTTGCCTTGCATCGTTTCCCTCGTCATGCATTTCCAC	X	-	151996074-151996123	Xq28e	Homo sapiens centrin, EF-hand protein, 2 (CETN2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [pmid 12176356] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 8248209] [evidence NAS]; The cell cycle process whereby a daughter centriole is formed perpendicular to an existing centriole. An immature centriole contains a ninefold radially symmetric array of single microtubules; mature centrioles consist of a radial array of nine microtubule triplets, doublets, or singlets depending upon the species and cell type [goid 7099] [pmid 12176356] [evidence IMP]; Any process that modulates the frequency, rate or extent of the division of the cytoplasm of a cell and its separation into two daughter cells [goid 32465] [pmid 16760425] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8248209] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16760425] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	CEN2; CALT	CEN2; CALT
Homo sapiens	RefSeq	NM_213608.1	ILMN_24056	C2ORF66	NM_213608.1	NM_213608.1		401027	47106053	NM_213608.1	C2orf66	NP_998773.1	ILMN_1655269	0001710066	S	899	GACAGCTCCCGCATCCCCTCTTTCACTCAGCTTCACTCCACCATGACCAG	2	-	197674052-197674101	2q33.1a	Homo sapiens chromosome 2 open reading frame 66 (C2orf66), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			UNQ6411	UNQ6411
Homo sapiens	RefSeq	NM_004095.2	ILMN_6626	EIF4EBP1	NM_004095.3	NM_004095.3		1978	117938308	NM_004095.3	EIF4EBP1	NP_004086.1	ILMN_1767324	0003890176	S	502	GCCTTATGAAAGTGATCATACTGGGCAGGCGTTGGCGTGGGGTCGGACAC	8	+	37917526-37917575	8p12a	Homo sapiens eukaryotic translation initiation factor 4E binding protein 1 (EIF4EBP1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7935836] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15809305] [evidence EXP]	The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of translational initiation [goid 45947] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15153109] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15094042] [evidence IPI]; Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [evidence IEA]	PHAS-I; MGC4316; 4EBP1; BP-1	PHAS-I; 4EBP1
Homo sapiens	RefSeq	NM_001077198.1	ILMN_162226	ATG9A	NM_001077198.1	NM_001077198.1		79065	116089281	NM_001077198.1	ATG9A	NP_001070666.1	ILMN_2410975	0003190326	A	3531	CAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAA	2	-	220084294-220084343	2q35f	Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae) (ATG9A), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 15755735] [evidence IMP]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		APG9L1; MGD3208	APG9L1; MGD3208
Homo sapiens	RefSeq	NM_001077198.1	ILMN_162226	ATG9A	NM_001077198.1	NM_001077198.1		79065	116089281	NM_001077198.1	ATG9A	NP_001070666.1	ILMN_2296290	0001850605	I	106	CAGCTGCAGAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCATGGAGC	2	-	220093157-220093206	2q35f	Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae) (ATG9A), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 15755735] [evidence IMP]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		APG9L1; MGD3208	APG9L1; MGD3208
Homo sapiens	RefSeq	NM_024085.2	ILMN_162226	ATG9A	NM_001077198.1	NM_001077198.1		79065	116089281	NM_001077198.1	ATG9A	NP_001070666.1	ILMN_1739008	0003890528	S	3615	ACTGCATGCTGGGACTGCTCCTACTCTCTGTCCCACCCCTCACCCAGCTG	2	-	220084210-220084259	2q35f	Homo sapiens ATG9 autophagy related 9 homolog A (S. cerevisiae) (ATG9A), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 15755735] [evidence IMP]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		APG9L1; MGD3208	APG9L1; MGD3208
Homo sapiens	RefSeq	NM_001729.1	ILMN_3085	BTC	NM_001729.1	NM_001729.1		685	4502460	NM_001729.1	BTC	NP_001720.1	ILMN_2081070	0004280131	S	543	CTTCGTGGTGGCCGAGCAGACGCCCTCCTGTGTCTGTGATGAAGGCTACA	4	-	75894936-75894953:75900093-75900124	4q13.3e	Homo sapiens betacellulin (BTC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8144591] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8144591] [evidence TAS]	Interacting selectively with the epidermal growth factor receptor [goid 5154] [pmid 8144591] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8439318] [evidence TAS]		
Homo sapiens	RefSeq	XR_015301.2	ILMN_162210	LOC728139	XR_015301.2	XR_015301.2		728139	169215474	XR_015301.2	LOC728139		ILMN_3212833	0005860136	A	351	GTGCCTCCTGCAATTAACCAGTTCACCTAGGCCCTGGACTGCCAAACAGC	22	+	18160042-18160091	22q11.21c	PREDICTED: Homo sapiens misc_RNA (LOC728139), miscRNA.					
Homo sapiens	RefSeq	XR_015301.2	ILMN_162210	LOC728139	XR_015301.2	XR_015301.2		728139	169215474	XR_015301.2	LOC728139		ILMN_3289331	0001300070	M	97	ATGAAAGGAGCTCTCTCCCACCACCCAAGATGCCAAAAGGAAAGAAGGCC	22	+	18159788-18159837	22q11.21c	PREDICTED: Homo sapiens misc_RNA (LOC728139), miscRNA.					
Homo sapiens	RefSeq	NM_003677.3	ILMN_181187	DENR	NM_003677.3	NM_003677.3		8562	55749880	NM_003677.3	DENR	NP_003668.2	ILMN_2168952	0005260575	S	2849	AGTCCAGGTTCAAGACTAGCCTGGGCAACATGGCAAGACCCTGTCCCTAT	12	+	121821694-121821743	12q24.31d	Homo sapiens density-regulated protein (DENR), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	DRP; DRP1; SMAP-3	DRP; DRP1; SMAP-3
Homo sapiens	RefSeq	NM_003677.3	ILMN_181187	DENR	NM_003677.3	NM_003677.3		8562	55749880	NM_003677.3	DENR	NP_003668.2	ILMN_1760954	0007330164	S	2556	GTCTGTTGCTGCTGAAAGATGTCTGTGTGCCTGTATCAACATGTGACTTC	12	+	121821401-121821450	12q24.31d	Homo sapiens density-regulated protein (DENR), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	DRP; DRP1; SMAP-3	DRP; DRP1; SMAP-3
Homo sapiens	RefSeq	XM_928365.1	ILMN_41221	LOC643231	XM_928365.1	XM_928365.1		643231	89057797	XM_928365.1	LOC643231	XP_933458.1	ILMN_1728295	0002490424	S	3431	CCTGCTGGTTATTAGAAGGGCATGTGCCCCTTTAGGAGGCATCTGCTATG	20	+	8180292-8180341		PREDICTED: Homo sapiens hypothetical protein LOC643231 (LOC643231), mRNA.					
Homo sapiens	RefSeq	NM_182492.1	ILMN_650	LRP5L	NM_182492.1	NM_182492.1		91355	32698823	NM_182492.1	LRP5L	NP_872298.1	ILMN_1718633	0000540403	S	3433	GCACACGTGCAGCCTATATGGGAAAACCTTCCCTCTGTACCTGCCTCAAA	22	-	24077507-24077556	22q11.23c	Homo sapiens low density lipoprotein receptor-related protein 5-like (LRP5L), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			DKFZp434O0213	DKFZp434O0213
Homo sapiens	RefSeq	NM_152528.1	ILMN_9810	WDSUB1	NM_152528.1	NM_152528.1		151525	22749102	NM_152528.1	WDSUB1	NP_689741.1	ILMN_1735275	0002650538	S	1476	CGTACAAGTCCCATGACAAATCTTGTTCTTCCTTCAGCGGTACTTACACC	2	-	159800844-159800893	2q24.2a	Homo sapiens WD repeat, sterile alpha motif and U-box domain containing 1 (WDSUB1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	FLJ36175; WDSAM1; UBOX6	FLJ36175; UBOX6; WDSAM1
Homo sapiens	RefSeq	NM_001002233.1	ILMN_4635	RAB11FIP1	NM_001002233.1	NM_001002233.1		80223	50363229	NM_001002233.1	RAB11FIP1	NP_001002233.1	ILMN_1656419	0000450278	I	26	GTTTTTGTGTATTTTCTTTGTCTCTCGTGATGCATCTGCACTGACCTGCA	8	-	37849879-37849928	8p12a	Homo sapiens RAB11 family interacting protein 1 (class I) (RAB11FIP1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Organelle consisting of networks of 60nm tubules organized around the microtubule organizing centre in some cell types. They transport receptors from late endosomes back to the plasma membrane for recycling and are also involved in membrane trafficking [goid 55037] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ22622; DKFZp686E2214; rab11-FIP1; RCP; NOEL1A; MGC78448; FLJ22524	FLJ22622; DKFZp686E2214; rab11-FIP1; RCP; NOEL1A; MGC78448; FLJ22524
Homo sapiens	RefSeq	XR_015300.1	ILMN_163061	LOC728509	XR_015300.1	XR_015300.1		728509	113421442	XR_015300.1	LOC728509		ILMN_3222592	0004200239	A	188	TGGACACCATCAAGCCGGCCAAGCACAGAGAGCTTGCTGCCTACGATAAG	10	-	44888875-44888924	10q11.21c	PREDICTED: Homo sapiens misc_RNA (LOC728509), miscRNA.					
Homo sapiens	RefSeq	NM_000298.3	ILMN_138911	PKLR	NM_000298.3	NM_000298.3		5313	32967595	NM_000298.3	PKLR	NP_000289.1	ILMN_1723644	0005090136	I	11	TCCCGCAGCCCCAGGCCCACACTGAAAGCATGTCGATCCAGGAGAACATA	1	-	153537789-153537810:153537811-153537838	1q22a	Homo sapiens pyruvate kinase, liver and RBC (PKLR), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 3126495] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	PKL; PK1; RPK	PKL; PK1; RPK
Homo sapiens	RefSeq	XM_927705.1	ILMN_45611	LOC644590	XM_927705.1	XM_927705.1		644590	88942667	XM_927705.1	LOC644590	XP_932798.1	ILMN_1664233	0000150437	S	121	GCCCTGCTGCTGGCTGTGATCTACCTCAACATCCAGGTGGTGCTGGACCA	1	-	43125013-43125062	1p34.2a	PREDICTED: Homo sapiens similar to EVIN1 (LOC644590), mRNA.					
Homo sapiens	RefSeq	NR_031577.1	ILMN_388506	MIR670	NR_031577.1	NR_031577.1		100313777	269846962	NR_031577.1	MIR670		ILMN_3310825	0000130762	S	9	TGGACCTGATGTCCCTGAGTGTATGTGGTGAACCTGAATTTGCCTTGGGT					Homo sapiens microRNA 670 (MIR670), microRNA.					
Homo sapiens	RefSeq	NM_003463.3	ILMN_165831	PTP4A1	NM_003463.3	NM_003463.3		7803	62865860	NM_003463.3	PTP4A1	NP_003454.1	ILMN_2154654	0001030025	S	4905	TTACGTTTGGGGTAACCAGCCTAAGTGGAATCTTGGAAGGAAAGTAAGGG	6	+	64293312-64293361	6q12a	Homo sapiens protein tyrosine phosphatase type IVA, member 1 (PTP4A1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 10569806] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	PTP(CAAX1); PTPCAAX1; DKFZp779M0721; HH72; PRL1; PRL-1	PTP(CAAX1); PTPCAAX1; DKFZp779M0721; HH72; PRL1; PRL-1
Homo sapiens	RefSeq	NM_003463.3	ILMN_165831	PTP4A1	NM_003463.3	NM_003463.3		7803	62865860	NM_003463.3	PTP4A1	NP_003454.1	ILMN_1760575	0006180414	S	4112	CTTGGGTTTGGATACCCTTAGTGGGATGATGTAAATAGAGGCTAGCTACC	6	+	64292519-64292568	6q12a	Homo sapiens protein tyrosine phosphatase type IVA, member 1 (PTP4A1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 10569806] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	PTP(CAAX1); PTPCAAX1; DKFZp779M0721; HH72; PRL1; PRL-1	PTP(CAAX1); PTPCAAX1; DKFZp779M0721; HH72; PRL1; PRL-1
Homo sapiens	RefSeq	NM_153426.1	ILMN_3076	PITX2	NM_153426.1	NM_153426.1		5308	24234707	NM_153426.1	PITX2	NP_700475.1	ILMN_1720976	0006650209	I	700	TCTCCTGAGAGCCGAAAAGAGGCAGCCAGCAGCAAGTTCTTCCCGCGGCA	4	-	111772964-111773013	4q25d	Homo sapiens paired-like homeodomain 2 (PITX2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 15385555] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 15385555] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [pmid 9708732] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9618168] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 15385555] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 16449236] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15385555] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC111022; IGDS; RS; IDG2; RIEG; PTX2; IGDS2; Brx1; ARP1; RIEG1; IHG2; IRID2; RGS; Otlx2; MGC20144	MGC111022; IGDS; RS; IDG2; RIEG; PTX2; IGDS2; Brx1; ARP1; RIEG1; IHG2; IRID2; RGS; Otlx2; MGC20144
Homo sapiens	RefSeq	NM_016382.2	ILMN_7885	CD244	NM_016382.2	NM_016382.2		51744	51593100	NM_016382.2	CD244	NP_057466.1	ILMN_1702534	0005860224	S	2227	CCAGACATTTCAACAAGGCTGTGGGGAGCAGGGCTGTGACTCTGGCTGAG	1	-	160800136-160800185	1q23.3a	Homo sapiens CD244 molecule, natural killer cell receptor 2B4 (CD244), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10358138] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10358138] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10358138] [evidence TAS]	Nmrk; NAIL; 2B4; SLAMF4; NKR2B4	Nmrk; SLAMF4; NAIL; 2B4; NKR2B4
Homo sapiens	Unigene	Hs.458448	ILMN_94085	HS.458448	Hs.458448		Hs.458448		10432966	AK021726			ILMN_1895548	0001770390	S	1225	TCTCCCCAGAGAGAATGCCACTAGAGAGGGGGCAGAACATGACCCTGCCT	15	+	60574837-60574886		Homo sapiens cDNA FLJ11664 fis, clone HEMBA1004632					
Homo sapiens	RefSeq	XM_937375.1	ILMN_163609	LOC643454	XR_016772.1	XR_016772.1		643454	113411653	XR_016772.1	LOC643454		ILMN_1747946	0002750452	S	526	ATTGATGCACAAAGTAAGCTGGAAAAATCTGAGGGTGGCTTAGTGGGAGC	1	-	212722884-212722933	1q41a	PREDICTED: Homo sapiens similar to AP-3 complex subunit sigma-1 (Adapter-related protein complex 3 sigma-1 subunit) (Sigma-adaptin 3a) (AP-3 complex sigma-3A subunit) (Sigma-3A-adaptin) (LOC643454), mRNA.					
Homo sapiens	RefSeq	NM_138764.2	ILMN_16901	BAX	NM_138764.2	NM_138764.2		581	34335124	NM_138764.2	BAX	NP_620119.1	ILMN_2258383	0004490538	I	441	TGGCGTGAAATGGCGTGATCTGGGCTCACTGCAACCTCTGCCTCCTGGGT	19	+	54155310-54155359	19q13.33a	Homo sapiens BCL2-associated X protein (BAX), transcript variant epsilon, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11912183] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 11136736] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11912183] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10629050] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any constituent part of cytosol, that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 44445] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The non-specific expansion of T cell populations within a whole or part of an organism to reach to a total number of T cells which will then remain stable over time in the absence of an external stimulus [goid 1777] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IEA]; The non-specific expansion of B cell populations within a whole or part of an organism to reach to a total number of B cells which will then remain stable over time in the absence of an external stimulus [goid 2358] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11912183] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 11912183] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]; The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA [goid 30264] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 9111042] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 9111042] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [pmid 15637643] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Programmed cell death that occurs in the developing retina [goid 46666] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9111042] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16608847] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9111042] [evidence IPI]; Interacting selectively with the BH3 domain of a protein of the Bcl-2 family. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death [goid 51434] [evidence IEA]	Bax zeta	Bax zeta
Homo sapiens	RefSeq	NM_000217.1	ILMN_10845	KCNA1	NM_000217.1	NM_000217.1		3736	4557684	NM_000217.1	KCNA1	NP_000208.1	ILMN_1670954	0001690309	S	1139	CTGTGACAATTGGAGGCAAGATCGTGGGCTCCTTGTGTGCCATCGCTGGT	12	+	4891944-4891993	12p13.32a	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia) (KCNA1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8845167] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8845167] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 7842011] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 8845167] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of potassium ions (K+) from one side of a membrane to the other [goid 15079] [pmid 8845167] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	HUK1; RBK1; MGC126782; AEMK; MBK1; EA1; KV1.1; MK1	HUK1; MGC126782; MBK1; RBK1; AEMK; EA1; KV1.1; MK1
Homo sapiens	Unigene	Hs.547245	ILMN_109480	HS.547245	Hs.547245		Hs.547245		19759985	BQ024706			ILMN_1864148	0006650673	S	464	CAGGACATCCCCTCACAATGAAGACTGATTCCACCAAAGCGGTCCAGCGC	1	+	42375744-42375793		UI-1-BB1p-atr-a-09-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-atr-a-09-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_182646.1	ILMN_3402	CPEB2	NM_182646.1	NM_182646.1		132864	33188440	NM_182646.1	CPEB2	NP_872587.1	ILMN_2375484	0004830382	A	4597	TTTATCCCTGTTGCATCTGGCTGCACAGAGCCTCTCCTCAAAGATGCTAC	4	+	14679932-14679981	4p15.33a	Homo sapiens cytoplasmic polyadenylation element binding protein 2 (CPEB2), transcript variant A, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC119575; MGC119576; MGC119577	MGC119575; MGC119576; MGC119577
Homo sapiens	RefSeq	XM_944543.1	ILMN_3402	CPEB2	NM_182646.1	NM_182646.1		132864	33188440	NM_182646.1	CPEB2	NP_872587.1	ILMN_1774948	0000830524	A	471	TCAGAGCAGTGGCTGGGGCACTGGAAGTATGTCCTGGGGAGCAATGCATG	4	+	14618059-14618108	4p15.33a	Homo sapiens cytoplasmic polyadenylation element binding protein 2 (CPEB2), transcript variant A, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC119575; MGC119576; MGC119577	
Homo sapiens	Unigene	Hs.385760	ILMN_89103	HS.385760	Hs.385760		Hs.385760		24270902	BC038776			ILMN_1824032	0000610168	S	677	CAAGTTGACCAAGAACTGACTGCAAGGTGCTGGTGGCTCTGGGATGAGAG	16	-	66152970-66153019		Homo sapiens cDNA clone IMAGE:5271145					
Homo sapiens	RefSeq	NM_016312.2	ILMN_3423	WBP11	NM_016312.2	NM_016312.2		51729	18375679	NM_016312.2	WBP11	NP_057396.1	ILMN_1766435	0005960278	S	2299	GCTAACATCCATTCCCTTTCATACCACCATTTTCACCCTGTTTCTTCCCC	12	-	14939737-14939786	12p12.3e	Homo sapiens WW domain binding protein 11 (WBP11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10593949] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with single-stranded DNA [goid 3697] [pmid 10593949] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	SIPP1; NPWBP; DKFZp779M1063	NPWBP; DKFZp779M1063; SIPP1
Homo sapiens	RefSeq	NM_016312.2	ILMN_3423	WBP11	NM_016312.2	NM_016312.2		51729	18375679	NM_016312.2	WBP11	NP_057396.1	ILMN_1661051	0002490093	S	2123	CAGTGGCCCATGGAGAAAGAGGCTCTTATTAAACTTAGATGAAAGAGCTG	12	-	14939913-14939962	12p12.3e	Homo sapiens WW domain binding protein 11 (WBP11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10593949] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with single-stranded DNA [goid 3697] [pmid 10593949] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	SIPP1; NPWBP; DKFZp779M1063	NPWBP; DKFZp779M1063; SIPP1
Homo sapiens	RefSeq	XM_943573.1	ILMN_138362	BRUNOL4	XM_943573.1	XM_943573.1		56853	89047376	XM_943573.1	BRUNOL4	XP_948666.1	ILMN_1675776	0001940059	I	1559	TCCACCACAGTCTCGCGCTGAGCTAGGAATAAAGTTCACGTAATCACATG				18q12.2b-q12.2c	PREDICTED: Homo sapiens bruno-like 4, RNA binding protein (Drosophila), transcript variant 7 (BRUNOL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [pmid 10893231] [evidence NAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 10893231] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding to nucleic acid [goid 900] [pmid 10893231] [evidence NAS]; Interacting selectively with the RNA element BRE (Bruno response element) [goid 42835] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	NM_007162.1	ILMN_19387	TFEB	NM_007162.1	NM_007162.1		7942	24307932	NM_007162.1	TFEB	NP_009093.1	ILMN_1733616	0001050086	S	2045	CTGTCTTCTGAGCCCGAGCCCCTCATTACCAGTGAAGGACATGCTTGAGG	6	-	41759953-41760002	6p21.1f	Homo sapiens transcription factor EB (TFEB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2115126] [evidence NAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2115126] [evidence NAS]	AlphaTFEB; TCFEB	AlphaTFEB; TCFEB
Homo sapiens	RefSeq	NM_032346.1	ILMN_25365	PDCD2L	NM_032346.1	NM_032346.1		84306	14150140	NM_032346.1	PDCD2L	NP_115722.1	ILMN_1706149	0004590424	S	855	CTTTTTGACCTGCCCTACATCAGAAGTCACCGAGCTCCCAGCCTGCAGCC	19	+	34912448-34912497	19q13.11c	Homo sapiens programmed cell death 2-like (PDCD2L), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MGC13096	MGC13096
Homo sapiens	RefSeq	NM_018062.2	ILMN_24728	FANCL	NM_018062.2	NM_018062.2		55120	49472818	NM_018062.2	FANCL	NP_060532.2	ILMN_1754045	0006760110	S	807	GCTTCCTGAGTGCTTCTTTCTTGGAGCTGACCATGTGGTAAAACCCCTGG	2	-	58243698-58243713:58244073-58244106	2p16.1b	Homo sapiens Fanconi anemia, complementation group L (FANCL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	POG; FAAP43; PHF9; FLJ10335	POG; FAAP43; PHF9; FLJ10335
Homo sapiens	RefSeq	NM_018062.2	ILMN_24728	FANCL	NM_018062.2	NM_018062.2		55120	49472818	NM_018062.2	FANCL	NP_060532.2	ILMN_2188909	0001500020	S	1635	TTAGTTTGTTAGACGTGAGTTATCCAAGTATTTATTTTGTGTAGTGTGTA	2	-	58239913-58239962	2p16.1b	Homo sapiens Fanconi anemia, complementation group L (FANCL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	POG; FAAP43; PHF9; FLJ10335	POG; FAAP43; PHF9; FLJ10335
Homo sapiens	RefSeq	XM_001720954.1	ILMN_344900	LOC100129513	XM_001720954.1	XM_001720954.1		100129513	169217132	XM_001720954.1	LOC100129513	XP_001721006.1	ILMN_3187903	0004880326	A	316	CATTCTGTCAATGTTCATGACAAATTATCTGGAACTATACAGATTACATG					PREDICTED: Homo sapiens similar to PRO0756 (LOC100129513), mRNA.					
Homo sapiens	RefSeq	XM_944265.1	ILMN_34086	LOC283050	XM_944265.1	XM_944265.1		283050	89032036	XM_944265.1	LOC283050	XP_949358.1	ILMN_1768553	0004570100	A	2692	GGCCACAAGCCCAGGAGTGCTGACAGACATCAGAAGCTGGAAGGGACAAG					PREDICTED: Homo sapiens hypothetical protein LOC283050 (LOC283050), mRNA.					
Homo sapiens	RefSeq	XM_941099.1	ILMN_44536	LOC646951	XM_941099.1	XM_941099.1		646951	88971213	XM_941099.1	LOC646951	XP_946192.1	ILMN_1660166	0006450465	S	108	TCACAGGTTGGGAACCAATAATACAACTCCTCAGAATCATGAAGGCAACC				3q25.1b	PREDICTED: Homo sapiens similar to hCG1786685 (LOC646951), mRNA.					
Homo sapiens	RefSeq	NM_015070.3	ILMN_8304	ZC3H13	NM_015070.3	NM_015070.3		23091	116008441	NM_015070.3	ZC3H13	NP_055885.3	ILMN_3246140	0005090259	S	5736	TGGGGAGGGACGAGTAGATGGTAAAAAGAAGGAAAAGGAGGTAAAAGGTG	13	-	46536937-46536986	13q14.12b	Homo sapiens zinc finger CCCH-type containing 13 (ZC3H13), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0853; FLJ35669; DKFZp434D1812	DKFZp434D1812
Homo sapiens	RefSeq	XM_929730.1	ILMN_36836	LOC646780	XM_929730.2	XM_929730.2		646780	113408831	XM_929730.2	LOC646780	XP_934823.1	ILMN_1698548	0005870711	S	601	TCAGTTGGAATGGCAAAGGCAACATTCAGATTCTCCTGTAGAACCATGGA	1	-	91131107-91131156	1p22.2a	PREDICTED: Homo sapiens similar to Phosphorylase b kinase alpha regulatory chain, skeletal muscle isoform (Phosphorylase kinase alpha M subunit) (LOC646780), mRNA.					
Homo sapiens	RefSeq	NM_032333.2	ILMN_17906	C10ORF58	NM_032333.2	NM_032333.2		84293	31543190	NM_032333.2	C10orf58	NP_115709.2	ILMN_2118472	0002120468	S	1278	GGTGAGCTGAGATCACACCACTGTATTCCAGCCTGGGTGACTGAGACTCT	10	+	82182319-82182368	10q23.1a	Homo sapiens chromosome 10 open reading frame 58 (C10orf58), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]			MGC4248	MGC4248
Homo sapiens	RefSeq	NM_001501.1	ILMN_181444	GNRH2	NM_001501.1	NM_001501.1		2797	4504056	NM_001501.1	GNRH2	NP_001492.1	ILMN_2354285	0003310050	A	116	AGGCTCAGCACTGGTCCCATGGCTGGTACCCTGGAGGAAAGCGAGCCCTC	20	+	2973125-2973174	20p13c	Homo sapiens gonadotropin-releasing hormone 2 (GNRH2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9419371] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9419371] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 9419371] [evidence TAS]	GnRH-II; LH-RHII	GnRH-II; LH-RHII
Homo sapiens	Unigene	Hs.537779	ILMN_103501	HS.537779	Hs.537779		Hs.537779		58571057	BP398340			ILMN_1868047	0002690521	S	122	GCTGAAGCCAGCTCCTGTCCTTTTATCCAAAACTGGGTAGTGTCCAGCCA	1	+	178157935-178157984		BP398340 Homo sapiens pancreatic islet Homo sapiens cDNA clone htp-29-07 3, mRNA sequence					
Homo sapiens	RefSeq	NM_052860.1	ILMN_23333	ZNF300	NM_052860.1	NM_052860.1		91975	16604251	NM_052860.1	ZNF300	NP_443092.1	ILMN_1676983	0006420452	S	2731	GCCAGATGGCCTTGGGTTTAATCCTGGCTCAGTGCCTCACAGATTGTGTG	5	-	150274287-150274336	5q33.1d	Homo sapiens zinc finger protein 300 (ZNF300), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686B24204	DKFZp686B24204
Homo sapiens	RefSeq	NM_201612.1	ILMN_10142	IKBIP	NM_201612.1	NM_201612.1		121457	42491361	NM_201612.1	IKBIP	NP_963906.1	ILMN_2324994	0001410706	A	65	CTGGTGAAGAAGCTGCCCTGGGCTTGTCGTCCTAGGGTCTCCAGACATGT	12	-	99038475-99038479:99038480-99038524	12q23.1c	Homo sapiens IKBKB interacting protein (IKBIP), transcript variant 2, mRNA.				FLJ31051	FLJ31051
Homo sapiens	RefSeq	NM_201612.1	ILMN_10142	IKBIP	NM_201612.1	NM_201612.1		121457	42491361	NM_201612.1	IKBIP	NP_963906.1	ILMN_2324989	0006620370	A	109	ACATGTCTGAGGTGAAGAGCCGGAAGAAGTCGGGGCCCAAGGGAGCCCCT	12	-	99038431-99038479:99038480-99038480	12q23.1c	Homo sapiens IKBKB interacting protein (IKBIP), transcript variant 2, mRNA.				FLJ31051	FLJ31051
Homo sapiens	RefSeq	NM_198483.2	ILMN_22025	RUFY4	NM_198483.2	NM_198483.2		285180	148540026	NM_198483.2	RUFY4	NP_940885.1	ILMN_3307845	0004830228	S	1118	GATCTTTGGCCGATTTTCTCGGCGGTATCCATGCAGGCTCTGTGGAGGCC	2	+	218662295-218662330:218662920-218662933	2q35e	Homo sapiens RUN and FYVE domain containing 4 (RUFY4), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ46536	FLJ46536
Homo sapiens	RefSeq	NM_198097.1	ILMN_8655	C7ORF28B	NM_198097.1	NM_198097.1		221960	37674288	NM_198097.1	C7orf28B	NP_932765.1	ILMN_2246083	0000050689	I	1587	GCAATACTTGCTTTGAAGAATCAGATTTCGACTCGGTCTGCTGATCTGAG	7	-	6805225-6805274	7p22.1a	Homo sapiens chromosome 7 open reading frame 28B (C7orf28B), mRNA.				H_NH0577018.2; MGC19819; DKFZP586I1023	H_NH0577018.2; MGC19819; DKFZP586I1023
Homo sapiens	RefSeq	XR_017429.1	ILMN_163379	LOC392787	XR_017429.1	XR_017429.1		392787	113418797	XR_017429.1	LOC392787		ILMN_3294642	0006330139	M	847	GGGACTACATCCTTATCGTCAAGTGGGGTGACGAAAGTGTCCCTGGAAGC	7	-	128339973-128340022	7q32.1a	PREDICTED: Homo sapiens misc_RNA (LOC392787), miscRNA.					
Homo sapiens	RefSeq	NM_015840.2	ILMN_20593	ADAR	NM_001111.3	NM_001111.3		103	70166851	NM_001111.3	ADAR	NP_001102.2	ILMN_1776777	0002900450	A	6457	GGTTGTGACTCCAAGAGCAGAGTGAGGAAGACCCCCAAGCATAGACTCGG	1	-	154554656-154554705	1q21.3e	Homo sapiens adenosine deaminase, RNA-specific (ADAR), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7565688] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7565688] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [pmid 9020165] [evidence IDA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 7565688] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DRADA; K88dsRBP; ADAR1; IFI4; G1P1; DSRAD; IFI-4; p136; DSH	DRADA; K88dsRBP; ADAR1; IFI4; G1P1; DSRAD; IFI-4; p136; DSH
Homo sapiens	RefSeq	NM_016192.2	ILMN_17013	TMEFF2	NM_016192.2	NM_016192.2		23671	12383050	NM_016192.2	TMEFF2	NP_057276.2	ILMN_1730645	0000270703	S	1516	CTAAAGGGAGCATGTTTCACAGTGGCTGGACTACCGAGAGCTTGGACTAC	2	-	192814990-192815036:192815037-192815039	2q32.3a-q32.3b	Homo sapiens transmembrane protein with EGF-like and two follistatin-like domains 2 (TMEFF2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10987305] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10903839] [evidence NAS]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TPEF; TENB2; TR; HPP1	TPEF; TENB2; TR; HPP1
Homo sapiens	RefSeq	NM_006174.2	ILMN_25423	NPY5R	NM_006174.2	NM_006174.2		4889	31377784	NM_006174.2	NPY5R	NP_006165.1	ILMN_1718198	0006180669	S	1141	GAAGTCAGCTCTCTTCATCCAGTAAGTTCATACCAGGGGTCCCCACTTGC	4	+	164272384-164272433	4q32.2b	Homo sapiens neuropeptide Y receptor Y5 (NPY5R), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8824284] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8824284] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Combining with gut peptide YY to initiate a change in cell activity [goid 1601] [evidence IEA]; Combining with pancreatic polypeptide PP to initiate a change in cell activity [goid 1602] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NPYR5	NPYR5
Homo sapiens	RefSeq	NM_006174.2	ILMN_25423	NPY5R	NM_006174.2	NM_006174.2		4889	31377784	NM_006174.2	NPY5R	NP_006165.1	ILMN_2047914	0000160154	S	1511	TCATATGTAATAATTCTCACTGTTTACCAAGGAAAGAACAAATGCTGGGG	4	+	164272754-164272763:164272764-164272803	4q32.2b	Homo sapiens neuropeptide Y receptor Y5 (NPY5R), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8824284] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8824284] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Combining with gut peptide YY to initiate a change in cell activity [goid 1601] [evidence IEA]; Combining with pancreatic polypeptide PP to initiate a change in cell activity [goid 1602] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NPYR5	NPYR5
Homo sapiens	RefSeq	NM_003780.3	ILMN_3553	B4GALT2	NM_003780.3	NM_003780.3		8704	53759111	NM_003780.3	B4GALT2	NP_003771.1	ILMN_1806508	0003120487	I	232	CATGGGGGACGGAACCGTCCGCAGCCGCCGGAGCCGGGAGCCCTGCCCAA	1	+	44217684-44217733	1p34.1f	Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (B4GALT2), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]; Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose [goid 4461] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 9405390] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	beta4Gal-T2; B4Gal-T3; B4Gal-T2	beta4Gal-T2; B4Gal-T2; B4Gal-T3
Homo sapiens	RefSeq	NM_001005417.1	ILMN_3553	B4GALT2	NM_003780.3	NM_003780.3		8704	53759111	NM_003780.3	B4GALT2	NP_003771.1	ILMN_1753755	0000510379	A	2047	GATCTTGGGGTTGGCCTTTGCATGGGAGGCAGGTGGGGCTTGGATCAGTA	1	+	44229265-44229314	1p34.1f	Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (B4GALT2), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]; Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose [goid 4461] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 9405390] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	beta4Gal-T2; B4Gal-T3; B4Gal-T2	beta4Gal-T2; B4Gal-T2; B4Gal-T3
Homo sapiens	RefSeq	NM_006713.2	ILMN_27043	SUB1	NM_006713.2	NM_006713.2		10923	19923783	NM_006713.2	SUB1	NP_006704.2	ILMN_1736054	0001660661	S	1114	CATGGCTTGTGTGAAAACTGAGCAGGTGTTTGTTTACCCATAGTGTTCTG	5	+	32637621-32637670	5p13.3b	Homo sapiens SUB1 homolog (S. cerevisiae) (SUB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 8062391] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8062391] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 8062391] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 8062391] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11389848] [evidence IPI]	P15; p14; MGC102747; PC4	P15; p14; MGC102747; PC4
Homo sapiens	Unigene	Hs.558911	ILMN_113455	HS.558911	Hs.558911		Hs.558911		51460414	XM_379123			ILMN_1885771	0000870551	S	2005	AGATTGGCCCCAGTTTCCCCAGAGTAGGAAGAGGCAGGAAGCCAGAGCAC					PREDICTED: Homo sapiens hypothetical LOC400999 (LOC400999), mRNA					
Homo sapiens	RefSeq	XM_001726578.1	ILMN_348489	LOC100130932	XM_001726578.1	XM_001726578.1		100130932	169213720	XM_001726578.1	LOC100130932	XP_001726630.1	ILMN_3192156	0005860619	A	419	AATCGATTGGCTAACGAGGTCGATGACGCCAGGCACAAGATGCTGGGCCT				19p13.12c	PREDICTED: Homo sapiens similar to Sm protein G (LOC100130932), mRNA.					
Homo sapiens	RefSeq	NM_014764.2	ILMN_4892	DAZAP2	NM_014764.2	NM_014764.2		9802	41281480	NM_014764.2	DAZAP2	NP_055579.1	ILMN_1718988	0000630356	S	1521	AGTGTCTGATGCGGCCACTCATTCGGCTCCCCAGAATTCCTAGACTGGGT	12	+	49923457-49923506	12q13.13b	Homo sapiens DAZ associated protein 2 (DAZAP2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	KIAA0058; MGC766; MGC14319	KIAA0058; MGC766; MGC14319
Homo sapiens	RefSeq	XM_496852.2	ILMN_41642	LOC441196	XM_496852.2	XM_496852.2		441196	89024794	XM_496852.2	LOC441196	XP_496852.2	ILMN_1652646	0005340706	S	61	TTTGATCTGGAAACTAAGACTAGAGAAGTCTTAAGAGATGACTTCTCAGA	7	-	7085567-7085568:7086230-7086277		PREDICTED: Homo sapiens similar to zinc finger protein 655 isoform a (LOC441196), mRNA.					
Homo sapiens	RefSeq	NM_005546.3	ILMN_23317	ITK	NM_005546.3	NM_005546.3		3702	21614549	NM_005546.3	ITK	NP_005537.3	ILMN_1699160	0007560632	S	4127	TCTTCACCTCCTGGTGCCCTATCCCGCAAAATGGGCTTCCTGCCTGGTTT	5	+	156614228-156614277	5q33.3a	Homo sapiens IL2-inducible T-cell kinase (ITK), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17652306] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 8364206] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 8364206] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PSCTK2; LYK; EMT; MGC126258; MGC126257	PSCTK2; LYK; EMT; MGC126258; MGC126257
Homo sapiens	RefSeq	NM_001007279.1	ILMN_20008	RASL10A	NM_001007279.1	NM_001007279.1		10633	55953119	NM_001007279.1	RASL10A	NP_001007280.1	ILMN_1747673	0003930026	A	1673	GGAAAGGACTTGGCTATGAACTTGACTGGAAACACGCAGCCTGCTCCTGG	22	-	29708986-29709035	22q12.2a	Homo sapiens RAS-like, family 10, member A (RASL10A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 8975699] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8975699] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RRP22	RRP22
Homo sapiens	RefSeq	NM_001007279.1	ILMN_20008	RASL10A	NM_001007279.1	NM_001007279.1		10633	55953119	NM_001007279.1	RASL10A	NP_001007280.1	ILMN_1688899	0004150736	I	901	TGGCAGGGCCTTTGCCTGAGGAGAGTGTGTAGGGTCTCCCAACGTCGTGG	22	-	29709758-29709807	22q12.2a	Homo sapiens RAS-like, family 10, member A (RASL10A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 8975699] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8975699] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RRP22	RRP22
Homo sapiens	RefSeq	XM_926590.3	ILMN_45866	LOC653240	XM_926590.3	XM_926590.3		653240	169210927	XM_926590.3	LOC653240	XP_931683.3	ILMN_3251398	0004010725	S	40	ATGGTAAACTCCTGTTGTGGCTCCGTGTGCTCTCACCAAGGCTGTGGCCG	17	-	36528043-36528092	17q21.2a	PREDICTED: Homo sapiens similar to hCG2043351 (LOC653240), mRNA.					
Homo sapiens	RefSeq	XM_934622.2	ILMN_36678	LOC647262	XM_934622.2	XM_934622.2		647262	113424182	XM_934622.2	LOC647262	XP_939715.2	ILMN_3246694	0001050142	S	252	TGGCTACTGTGGCTACCGGCCATTTTGCTTTAGAAGATGCTATTCTTCCT	13	+	63219270-63219319	13q21.31c	PREDICTED: Homo sapiens hypothetical LOC647262 (LOC647262), mRNA.					
Homo sapiens	RefSeq	NM_020737.1	ILMN_19564	LRFN2	NM_020737.1	NM_020737.1		57497	55741570	NM_020737.1	LRFN2	NP_065788.1	ILMN_1758924	0001740092	S	2927	GTTTACATCCAGGGACAGTTTCGTCTCCCTGTCAATGGCCTCGTGTCCCC	6	-	40467965-40468014	6p21.2a-p21.1h	Homo sapiens leucine rich repeat and fibronectin type III domain containing 2 (LRFN2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP11-535K1.2; FIGLER2; SALM1; KIAA1246	RP11-535K1.2; FIGLER2; SALM1; KIAA1246
Homo sapiens	RefSeq	XM_929532.1	ILMN_36811	LOC646596	XM_929532.1	XM_929532.1		646596	89052445	XM_929532.1	LOC646596	XP_934625.1	ILMN_1763767	0000650039	S	16	ACAGTCAGAGTCCTCTCATCTGCCCGCAGGATCTGCATGGGGCAGGTGTT	19	-	15843628-15843677	19p13.12a	PREDICTED: Homo sapiens similar to Cytochrome P450 4F11 (CYPIVF11) (LOC646596), mRNA.					
Homo sapiens	RefSeq	XM_067176.8	ILMN_45904	LOC131055	XM_941513.2	XM_941513.2		131055	113415300	XM_941513.2	LOC131055	XP_946606.2	ILMN_1738858	0004010102	A	64	TCGCTGTCCACGGTGAGCCCTTGGGTGGTATCCCCTTCGAGCTGTTTGCA				3q26.1f	PREDICTED: Homo sapiens similar to peptidylprolyl isomerase A isoform 1 (LOC131055), mRNA.					
Homo sapiens	RefSeq	NM_005533.2	ILMN_4643	IFI35	NM_005533.2	NM_005533.2		3430	34147320	NM_005533.2	IFI35	NP_005524.1	ILMN_1745374	0002510220	S	1041	CCAAGGTTCTCACACTGGCCTGGGCTTGGGTGCCCATATAGGAGGTCTGT	17	+	38419876-38419925	17q21.31a	Homo sapiens interferon-induced protein 35 (IFI35), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8288566] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8954125] [evidence IPI]	FLJ21753; IFP35	FLJ21753; IFP35
Homo sapiens	RefSeq	NM_145023.4	ILMN_12205	CCDC7	NM_145023.4	NM_145023.4		221016	71051594	NM_145023.4	CCDC7	NP_659460.3	ILMN_1768877	0006370243	I	447	CCTACGTCCCCTGCCAACCCCTGCCGCTCTCCTCTATTTTGTACACTTTA	10	+	32735487-32735536	10p11.22b	Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 1, mRNA.				BioT2-C; BioT2-A; FLJ32762; DKFZp686N0559; RP11-479G22.1; BioT2-B	BioT2-C; BioT2-A; FLJ32762; DKFZp686N0559; RP11-479G22.1; BioT2-B
Homo sapiens	RefSeq	XM_001717965.1	ILMN_352382	LOC100133446	XM_001717965.1	XM_001717965.1		100133446	169217870	XM_001717965.1	LOC100133446	XP_001718017.1	ILMN_3249054	0006330382	S	561	CGTCCCTTGCCCTACCTGTGGCTCATGGCCATCTGAGAAAGTGGACTTCC					PREDICTED: Homo sapiens similar to PRAME family member 10 (LOC100133446), mRNA.					
Homo sapiens	RefSeq	NM_012091.2	ILMN_1053	ADAT1	NM_012091.2	NM_012091.2		23536	7382475	NM_012091.2	ADAT1	NP_036223.1	ILMN_1657139	0001710204	S	2232	GGGACTGCCGGTGGCCATCTTTTCCTACTACCTAGAGAAAGCCAGCAAAG	16	-	75633443-75633492	16q23.1a	Homo sapiens adenosine deaminase, tRNA-specific 1 (ADAT1), mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [pmid 10430867] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10430867] [evidence IMP]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a tRNA molecule [goid 8251] [pmid 10430867] [evidence IMP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HADAT1	HADAT1
Homo sapiens	RefSeq	NM_024847.2	ILMN_462	TMC7	NM_024847.2	NM_024847.2		79905	33636690	NM_024847.2	TMC7	NP_079123.2	ILMN_1689306	0005820743	S	3238	TGTTTTTCTTCCGTTCACTGGCTCCACACGTTTCCTGGGGAGTAGCCTGG	16	+	18981673-18981722	16p12.3b	Homo sapiens transmembrane channel-like 7 (TMC7), mRNA.				FLJ21240; DKFZp781O2274	FLJ21240; DKFZp781O2274
Homo sapiens	Unigene	Hs.378070	ILMN_88633	HS.378070	Hs.378070		Hs.378070		8362148	BE045095			ILMN_1873112	0003850201	S	164	CTATGTGGCTGCAAGATCCACGTGCATGACCCTTCTTTCCTACCTTGTTG	15	-	89022411-89022460		hn28d09.x1 NCI_CGAP_Thy7 Homo sapiens cDNA clone IMAGE:3023441 3, mRNA sequence					
Homo sapiens	RefSeq	XM_930064.1	ILMN_307161	FAM75A1	NM_001085452.1	NM_001085452.1		647060	146231957	NM_001085452.1	FAM75A1	NP_001078921.1	ILMN_1709379	0001300196	S	3952	TCTTGCACCCCAAGAAAGCTGTATCCCCAGTCAGTCCCCTTCAGCACTGG	9	+	39351685-39351734	9p13.1a	Homo sapiens family with sequence similarity 75, member A1 (FAM75A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C9orf36; C9orf36A	
Homo sapiens	RefSeq	XM_001723699.1	ILMN_351082	LOC645314	XM_001723699.1	XM_001723699.1		645314	169164467	XM_001723699.1	LOC645314	XP_001723751.1	ILMN_3294302	0006860497	M	94	GAACTCTTCCACTGGCAGCTGAACTCTTCCACCAGCATTCTCAGGCCTTG				2q32.3c	PREDICTED: Homo sapiens similar to hCG1642995 (LOC645314), mRNA.					
Homo sapiens	RefSeq	XM_942612.1	ILMN_44035	LOC652887	XM_942612.1	XM_942612.1		652887	89060651	XM_942612.1	LOC652887	XP_947705.1	ILMN_1668505	0006370653	S	29	GGTTGACGCAAAGCTTCAATCTAACTCGGGGTCAGAAGAGTAAGCTCCGT					PREDICTED: Homo sapiens similar to melanoma antigen family B, 6 (LOC652887), mRNA.					
Homo sapiens	RefSeq	XM_934407.1	ILMN_34984	LOC647131	XM_934407.2	XM_934407.2		647131	113424163	XM_934407.2	LOC647131	XP_939500.1	ILMN_1696068	0001940746	S	149	CGACTGAACAGGTGGTTAACTCGCCCGGGGAGAGGAACTGCCAGCTCCCG	13	-	48448111-48448117:48448918-48448960	13q14.2c	PREDICTED: Homo sapiens hypothetical LOC647131 (LOC647131), mRNA.					
Homo sapiens	RefSeq	NM_018338.2	ILMN_28668	WDR52	NM_018338.2	NM_018338.2		55779	31377845	NM_018338.2	WDR52	NP_060808.2	ILMN_1802691	0006900008	S	2639	GCTAATAGCTTTGATGATCGTTTCTTGGTGACTGCTGGAGCAGATGGCAA	3	-	114567648-114567697	3q13.2b	Homo sapiens WD repeat domain 52 (WDR52), mRNA.				DKFZp781C082; MGC142113; MGC126631; FLJ11142	MGC142113; MGC126631; DKFZp781C082; FLJ11142
Homo sapiens	RefSeq	NM_018338.2	ILMN_28668	WDR52	NM_018338.2	NM_018338.2		55779	31377845	NM_018338.2	WDR52	NP_060808.2	ILMN_2189037	0004280711	S	2869	GGGAGAAATAAAGGCACGGAAGAGAGAGCAAATCAAAGCTTTGAGGAGTG	3	-	114564743-114564792	3q13.2b	Homo sapiens WD repeat domain 52 (WDR52), mRNA.				DKFZp781C082; MGC142113; MGC126631; FLJ11142	MGC142113; MGC126631; DKFZp781C082; FLJ11142
Homo sapiens	RefSeq	NM_206953.1	ILMN_8154	PRAME	NM_206953.1	NM_206953.1		23532	46249366	NM_206953.1	PRAME	NP_996836.1	ILMN_1740744	0002570603	I	636	GGAGCCAGAGATTTGCACTGAAAGGGCGGGATTGAGTCGCCAGTTGTCAG	22	-	22899430-22899479	22q11.22b	Homo sapiens preferentially expressed antigen in melanoma (PRAME), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	MAPE; OIP4	MAPE; OIP4
Homo sapiens	RefSeq	XR_019389.1	ILMN_181922	LOC346085	XR_019389.1	XR_019389.1		346085	113418372	XR_019389.1	LOC346085		ILMN_3291053	0006200725	M	1009	AAGACCCCTGAACCACCAGCCCCAGTGACAGCACAAGAGGAAAAGAGAGG				6q27b	PREDICTED: Homo sapiens misc_RNA (LOC346085), miscRNA.					
Homo sapiens	RefSeq	NM_002810.2	ILMN_13974	PSMD4	NM_002810.2	NM_002810.2		5710	78000204	NM_002810.2	PSMD4	NP_002801.1	ILMN_2344130	0002630463	A	925	CTTATGCCATGCAGATGTCCCTGCAGGGAGCAGAGTTTGGCCAGGCGGAA	1	+	149505507-149505539:149505620-149505636	1q21.2d	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 (PSMD4), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17662948] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17891176] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	pUB-R5; AF-1; AF; ASF; Rpn10; MCB1; S5A	pUB-R5; Rpn10; AF-1; AF; ASF; MCB1; S5A
Homo sapiens	RefSeq	NM_002810.1	ILMN_13974	PSMD4	NM_002810.2	NM_002810.2		5710	78000204	NM_002810.2	PSMD4	NP_002801.1	ILMN_1728355	0005960739	A	922	TTGCTTATGCCATGCAGATGTCCCTGCAGGGAGCAGAGTTTGGCCAGGCG	1	+	149505504-149505539:149505620-149505633	1q21.2d	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 (PSMD4), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17662948] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17891176] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	pUB-R5; AF-1; AF; ASF; Rpn10; MCB1; S5A	pUB-R5; Rpn10; AF-1; AF; ASF; MCB1; S5A
Homo sapiens	RefSeq	NM_002810.2	ILMN_13974	PSMD4	NM_002810.2	NM_002810.2		5710	78000204	NM_002810.2	PSMD4	NP_002801.1	ILMN_3307799	0006110446	S	876	CGCACTGGGCTTCCTGACCTAAGCAGTATGACTGAGGAAGAGCAGATTGC	1	+	149505458-149505507	1q21.2d	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 (PSMD4), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17662948] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17891176] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	pUB-R5; AF-1; AF; ASF; Rpn10; MCB1; S5A	pUB-R5; Rpn10; AF-1; AF; ASF; MCB1; S5A
Homo sapiens	RefSeq	NM_001772.2	ILMN_24441	CD33	NM_001772.3	NM_001772.3		945	130979980	NM_001772.3	CD33	NP_001763.3	ILMN_1747622	0007050050	S	1092	CCAAGGACACCTCCACCGAATACTCAGAGGTCAGGACCCAGTGAGGAACC	19	+	51742900-51742943:51742944-51742949	19q13.33d	Homo sapiens CD33 molecule (CD33), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3139766] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3139766] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10611343] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10611343] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10611343] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10611343] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10611343] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	SIGLEC3; FLJ00391; SIGLEC-3; p67	SIGLEC3; FLJ00391; SIGLEC-3; p67
Homo sapiens	Unigene	Hs.568058	ILMN_120239	HS.568058	Hs.568058		Hs.568058		50474145	CR593338			ILMN_1912619	0005560037	S	1760	TCCCATCTGGGGAGAAGATAGTTCTCTGACTCGAGGCACCTCTAGATTCC	12	-	65650860-65650909		full-length cDNA clone CS0DF032YD19 of Fetal brain of Homo sapiens (human)					
Homo sapiens	RefSeq	NM_006872.2	ILMN_13588	GTF2A1L	NM_006872.2	NM_006872.2		11036	26787967	NM_006872.2	GTF2A1L	NP_006863.2	ILMN_1681616	0005220154	I	1456	GGGAGAGACTATGTATTTGCAAAAGCCATTGGTGATGCAGAGTGGTAAAC	2	+	48760038-48760085:48760086-48760087	2p16.3d	Homo sapiens general transcription factor IIA, 1-like (GTF2A1L), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12) [goid 5672] [evidence IEA]; A component of the transcription machinery of RNA Polymerase II. In humans, TFIIA is a heterotrimer composed of an alpha (P35), beta (P19) and gamma subunits (P12) [goid 5672] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10364255] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10364255] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	MGC26254; ALF	MGC26254; ALF
Homo sapiens	RefSeq	XM_938095.1	ILMN_36995	LOC392506	XM_938095.1	XM_938095.1		392506	89060924	XM_938095.1	LOC392506	XP_943188.1	ILMN_1693465	0005700022	A	104	CTGTCCCTGGTGGCCAAATGGAGGCTAGTATTCTCAAACCTGGCATGGTG					PREDICTED: Homo sapiens similar to eukaryotic translation elongation factor 1 alpha 2 (LOC392506), mRNA.					
Homo sapiens	RefSeq	XM_001127139.1	ILMN_174757	LOC728307	XM_001127139.1	XM_001127139.1		728307	113430174	XM_001127139.1	LOC728307	XP_001127139.1	ILMN_3241578	0006330600	S	1548	ACGCACGGACATTGCCCCTACTCCAGGCGCCCTGCGAGGTTACAGGCCAC	X	-	152045337-152045386	Xq28f	PREDICTED: Homo sapiens hypothetical LOC728307 (LOC728307), mRNA.					
Homo sapiens	RefSeq	XM_001726700.1	ILMN_346468	LOC100133982	XM_001726700.1	XM_001726700.1		100133982	169164058	XM_001726700.1	LOC100133982	XP_001726752.1	ILMN_3244779	0000990196	S	733	CATCTGACCTATGTGGGCAAATTTCCTGTGCTTTTCAGTGGAGTCCCAGC					PREDICTED: Homo sapiens similar to anaphase promoting complex subunit 1 (LOC100133982), mRNA.					
Homo sapiens	RefSeq	NM_003144.2	ILMN_23274	SSR1	NM_003144.2	NM_003144.2		6745	6552340	NM_003144.2	SSR1	NP_003135.1	ILMN_1750693	0000110451	S	2942	CCTCAGATGCCAGGGGTCTGCTCTAGCATCAGTAAGTATTTAGCAGAAAC	6	-	7233047-7233096	6p24.3c	Homo sapiens signal sequence receptor, alpha (translocon-associated protein alpha) (SSR1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8050590] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8050590] [evidence TAS]	The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria [goid 6613] [pmid 8050590] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10437777] [evidence TAS]	Interacting selectively with a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized [goid 5048] [pmid 8050590] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp781N23103; TRAPA	DKFZp781N23103; TRAPA
Homo sapiens	RefSeq	NM_006226.1	ILMN_178975	PLCL1	NM_006226.1	NM_006226.1		5334	5453911	NM_006226.1	PLCL1	NP_006217.1	ILMN_2206953	0002100356	S	4098	TGGCAGCTTAGAGGTGTTGGCTTTGTTTGGATGTAATTTTAGGGGTACTA	2	+	198720832-198720881	2q33.1b	Homo sapiens phospholipase C-like 1 (PLCL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 7633416] [evidence TAS]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]	Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC138190; PLDL1; PLCE; PLCL; PLC-L; MGC126580	MGC138190; PLDL1; PLCE; PLCL; PLC-L; MGC126580
Homo sapiens	RefSeq	NM_152717.1	ILMN_307169	MS4A15	NM_001098835.1	NM_001098835.1		219995	149588598	NM_001098835.1	MS4A15	NP_001092305.1	ILMN_1721088	0003170167	S	1779	ACTCCCTTCCCCACCCCCATAGCCCAAGGACAAGGCTACCACAGAAGGTT	11	+	60300600-60300649	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 15 (MS4A15), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC35295	
Homo sapiens	RefSeq	XM_945227.1	ILMN_15319	PRTG	NM_173814.3	NM_173814.3		283659	83281199	NM_173814.3	PRTG	NP_776175.2	ILMN_1705225	0000610402	A	1956	GAGGTGGCAGCAAGATGTAGAGGACACAGCTGCTATTCAGGGCTACAAGC	15	-	53752018-53752067	15q21.3c	Homo sapiens protogenin homolog (Gallus gallus) (PRTG), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		FLJ25756	
Homo sapiens	RefSeq	NM_173814.3	ILMN_15319	PRTG	NM_173814.3	NM_173814.3		283659	83281199	NM_173814.3	PRTG	NP_776175.2	ILMN_2084031	0004890747	S	3572	GTTAGTGAGCAGACTTCCTCCTTAGTTCTGCAGCCGCCATCTGCCATGCT	15	-	53699381-53699430	15q21.3c	Homo sapiens protogenin homolog (Gallus gallus) (PRTG), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		FLJ25756	FLJ25756
Homo sapiens	RefSeq	XM_939907.1	ILMN_15319	PRTG	NM_173814.3	NM_173814.3		283659	83281199	NM_173814.3	PRTG	NP_776175.2	ILMN_1660085	0002120484	S	45	CTGAATGGCGCCTCCTCTGCGACCCCTCGCCCGGCTGCGACCGCCGGGGA	15	-	53822375-53822421:53822422-53822424	15q21.3c	Homo sapiens protogenin homolog (Gallus gallus) (PRTG), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		FLJ25756	
Homo sapiens	RefSeq	NM_015353.1	ILMN_40023	KCTD2	XM_940854.2	XM_940854.2		23510	113427589	XM_940854.2	KCTD2	XP_945947.2	ILMN_1810115	0001300241	A	436	CAGGAGCCTATCTGATTGACAGGGACCCCACCTACTTTGGTCCTATCCTC				17q25.1c	PREDICTED: Homo sapiens potassium channel tetramerisation domain containing 2 (KCTD2), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		KIAA0176
Homo sapiens	RefSeq	NM_178816.2	ILMN_174468	CASC2	XR_017868.1	XR_017868.1		255082	113421622	XR_017868.1	CASC2		ILMN_1680927	0000010577	I	2696	GGTCATGGCCAGAGCCCAAGGGTTTGAGGAGCCTTCTATGACGTGATGAG	10	+	119805190-119805239	10q26.11b	PREDICTED: Homo sapiens cancer susceptibility candidate 2, transcript variant 1 (CASC2), misc RNA.					C10orf5
Homo sapiens	RefSeq	NR_029597.1	ILMN_388143	MIR148A	NR_029597.1	NR_029597.1		406940	262206160	NR_029597.1	MIR148A		ILMN_3308723	0006330131	S	2	GGCAAAGTTCTGAGACACTCCGACTCTGAGTATGATAGAAGTCAGTGCAC				7p15.2b	Homo sapiens microRNA 148a (MIR148A), microRNA.					
Homo sapiens	RefSeq	NM_000771.2	ILMN_27271	CYP2C9	NM_000771.2	NM_000771.2		1559	13699817	NM_000771.2	CYP2C9	NP_000762.2	ILMN_1670652	0003390767	S	1371	CCTGAAATCTCTGGTTGACCCAAAGAACCTTGACACCACTCCAGTTGTCA	10	+	96738673-96738722	10q23.33c	Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 9 (CYP2C9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 3032244] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 2827463] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence NAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Catalysis of the reaction: (-)-limonene + NADPH + H+ + O2 = (-)-trans-carveol + NADP+ + H2O [goid 18675] [evidence IEA]; Catalysis of the reaction: (-)-limonene + NADPH + H+ + O2 = (-)-perillyl alcohol + NADP+ + H2O [goid 18676] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: (4-hydroxyphenyl)ethan-1-one + NADPH + H+ + O2 = 4-hydroxyphenyl acetate + NADP+ + H2O [goid 33767] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P450IIC9; MGC88320; P450 MP-4; P450 PB-1; CYP2C; MGC149605; CPC9; CYP2C10	P450IIC9; MGC88320; P450 MP-4; P450 PB-1; CYP2C; MGC149605; CPC9; CYP2C10
Homo sapiens	RefSeq	NM_080860.2	ILMN_23999	RSPH1	NM_080860.2	NM_080860.2		89765	49619232	NM_080860.2	RSPH1	NP_543136.1	ILMN_1684571	0006020451	S	935	AGAGCCGGGAGTATGACCAGGAGGAGTTCCGCTATGACATGGATGAGGGA	21	-	43892978-43892980:43896008-43896054	21q22.3b	Homo sapiens radial spoke head 1 homolog (Chlamydomonas) (RSPH1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]		RSP44; TSGA2; RSPH10A; MGC141927; MGC126568; TSA2	RSP44; TSGA2; RSPH10A; MGC141927; MGC126568; TSA2
Homo sapiens	RefSeq	NM_015617.1	ILMN_26789	PYGO1	NM_015617.1	NM_015617.1		26108	30911102	NM_015617.1	PYGO1	NP_056432.1	ILMN_2179229	0006330086	S	894	CCCTGCAAATGGGACGCAGAATAAGCCACGACAACCAAGAGGTGCAGCAG	15	-	55838537-55838586	15q21.3c	Homo sapiens pygopus homolog 1 (Drosophila) (PYGO1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp547G0910	DKFZp547G0910
Homo sapiens	RefSeq	NM_020664.3	ILMN_7935	DECR2	NM_020664.3	NM_020664.3		26063	37675281	NM_020664.3	DECR2	NP_065715.1	ILMN_1783337	0000380148	S	1339	CTCTTGGCTGAAAACACTGAGGTGCTCCCATCTGTGCGTGGCCCATGAGC	16	+	402244-402293	16p13.3f	Homo sapiens 2,4-dienoyl CoA reductase 2, peroxisomal (DECR2), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: trans-2,3-didehydroacyl-CoA + NADP+ = trans,trans-2,3,4,5-tetradehydroacyl-CoA + NADPH + H+ [goid 8670] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	PDCR	PDCR
Homo sapiens	RefSeq	NM_021914.5	ILMN_4219	CFL2	NM_021914.5	NM_021914.5		1073	33946276	NM_021914.5	CFL2	NP_068733.1	ILMN_2291891	0005810300	I	32	GTCCCTTTCGCTTCCACGTCCAAACCCCTTTAAGAAGGATGAATGGGCAG	14	-	34252704-34252753	14q13.2a	Homo sapiens cofilin 2 (muscle) (CFL2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	NEM7	NEM7
Homo sapiens	RefSeq	NM_000397.2	ILMN_13274	CYBB	NM_000397.2	NM_000397.2		1536	6996020	NM_000397.2	CYBB	NP_000388.2	ILMN_1682312	0000840168	S	3955	GTTTCCTTTTTATCTCTCAAGCCACCAGCTGCCAGCCACCACGAGCCAGC	X	+	37557345-37557394	Xp11.4e	Homo sapiens cytochrome b-245, beta polypeptide (chronic granulomatous disease) (CYBB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2 [goid 43020] [pmid 3305576] [evidence IDA]; A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2 [goid 43020] [pmid 12716910] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 7719350] [evidence TAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [pmid 12042318] [evidence IDA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [pmid 12716910] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 12716910] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 9774399] [evidence IMP]; A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 45730] [pmid 9774399] [evidence IMP]; A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 45730] [pmid 12716910] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 3305576] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [pmid 12042318] [evidence IDA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [pmid 12716910] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [pmid 9774399] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 12042318] [evidence IPI]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	CGD; GP91-PHOX; GP91PHOX; NOX2; GP91-1	GP91PHOX; NOX2; CGD; GP91-PHOX; GP91-1
Homo sapiens	RefSeq	NM_145308.2	ILMN_14041	C11ORF76	NM_145308.2	NM_145308.2		220070	34147720	NM_145308.2	C11orf76	NP_660351.1	ILMN_2168079	0000060593	S	1603	GGCCCTAGAGAGTTCTCTGGTACCCTGGTTTCAGACTTCTAGCCTCCAGA	11	+	70388788-70388837	11q13.3e	Homo sapiens chromosome 11 open reading frame 76 (C11orf76), mRNA.					
Homo sapiens	RefSeq	NM_145308.2	ILMN_14041	C11ORF76	NM_145308.2	NM_145308.2		220070	34147720	NM_145308.2	C11orf76	NP_660351.1	ILMN_1669579	0001430373	S	1032	CCCACTGTCAGAGAGGAAACAGAGGCTCGAAGATGAGAAGTGCCCTGCAC	11	+	70388217-70388266	11q13.3e	Homo sapiens chromosome 11 open reading frame 76 (C11orf76), mRNA.					
Homo sapiens	RefSeq	XR_016043.1	ILMN_172541	LOC731969	XR_016043.1	XR_016043.1		731969	113427359	XR_016043.1	LOC731969		ILMN_3303295	0000360167	M	94	GGGAGGAGGAAAGGGTCATTTGGAGCCAGCAGTTTTCAGCTTTCTGGGGG					PREDICTED: Homo sapiens misc_RNA (LOC731969), miscRNA.					
Homo sapiens	RefSeq	XR_016043.1	ILMN_172541	LOC731969	XR_016043.1	XR_016043.1		731969	113427359	XR_016043.1	LOC731969		ILMN_3226694	0006900035	A	592	TCACCAGTTTATTTGCAGTCTCTTAATGTACCCACCACCCTTTCAGCTAG					PREDICTED: Homo sapiens misc_RNA (LOC731969), miscRNA.					
Homo sapiens	RefSeq	NM_001461.1	ILMN_163023	FMO5	NM_001461.1	NM_001461.1		2330	4503760	NM_001461.1	FMO5	NP_001452.1	ILMN_1811632	0002350243	S	1870	CCTTCCACTCATGATCCGTCACTCTTCCTTGTGGTAATCCCTAGACTGGG	1	-	145124866-145124915	1q21.1c	Homo sapiens flavin containing monooxygenase 5 (FMO5), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located in the endoplasmic reticulum membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31227] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence NAS]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]		
Homo sapiens	RefSeq	NM_198681.1	ILMN_12403	PLEKHG5	NM_198681.2	NM_198681.2		57449	111154083	NM_198681.2	PLEKHG5	NP_941374.2	ILMN_1780047	0006370010	I	408	GACGGAGACCTGTGTGTCTGATTAGAGAGGCCTGTGGCATTGGCATGTGG	1	-	6579612-6579661	1p36.31a	Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 5 (PLEKHG5), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	KIAA0720; RP4-650H14.3; GEF720; DSMA4	KIAA0720; RP4-650H14.3
Homo sapiens	RefSeq	NM_033329.1	ILMN_8753	SIGLEC12	NM_033329.1	NM_033329.1		89858	16506825	NM_033329.1	SIGLEC12	NP_201586.1	ILMN_1695949	0003360653	I	21	ATGCTGCTGCCCCTGCTATGGGCAAATGAAGAGAGGGACAGTGGGGGCTG	19	-	56695389-56695438	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 12 (SIGLEC12), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Siglec-XII; FLJ38600; Siglec-12; S2V; SIGLECL1; SLG; Siglec-L1	Siglec-XII; FLJ38600; SLG; Siglec-12; S2V; SIGLECL1; Siglec-L1
Homo sapiens	RefSeq	NM_173529.3	ILMN_28334	C18ORF54	NM_173529.3	NM_173529.3		162681	40255175	NM_173529.3	C18orf54	NP_775800.2	ILMN_1716006	0004920189	S	4272	CCTCCCAGTGTATTCTGCATTGTCCTTACCCTAGATCAGCCCCTTCTGTG	18	+	50161651-50161700	18q21.2c	Homo sapiens chromosome 18 open reading frame 54 (C18orf54), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC33382	MGC33382
Homo sapiens	RefSeq	XR_038504.1	ILMN_336254	LOC100132672	XR_038504.1	XR_038504.1		100132672	169184295	XR_038504.1	LOC100132672		ILMN_3236628	0000630129	S	1373	CTGTGTCAATGGAAGTGTCGTCCAGATCATTGTCTATATGGAAGCAGTTG	9	+	68791718-68791767	9q12i	PREDICTED: Homo sapiens misc_RNA (LOC100132672), miscRNA.					
Homo sapiens	RefSeq	XM_929701.1	ILMN_37234	LOC646750	XM_929701.1	XM_929701.1		646750	89052458	XM_929701.1	LOC646750	XP_934794.1	ILMN_1663227	0001230168	S	578	GCTCACTAATGTGCAAGTAACACCTGCTGCTACTCCTGCCATTCAGGACC	19	-	20390131-20390180		PREDICTED: Homo sapiens hypothetical protein LOC646750 (LOC646750), mRNA.					
Homo sapiens	RefSeq	NM_006815.2	ILMN_177085	TMED2	NM_006815.3	NM_006815.3		10959	118200338	NM_006815.3	TMED2	NP_006806.1	ILMN_1654939	0004290537	S	1604	GGCCTTTGGGCCACTGTTCAGGGTACTGACCATCAGTGTCAGCATTAGGG	12	+	122648119-122648168	12q24.31d	Homo sapiens transmembrane emp24 domain trafficking protein 2 (TMED2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence ISS]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16641999] [evidence IPI]	FLJ21323; RNP24; P24A	RNP24; P24A
Homo sapiens	RefSeq	XM_001724872.1	ILMN_335351	LOC729523	XM_001724872.1	XM_001724872.1		729523	169202990	XM_001724872.1	LOC729523	XP_001724924.1	ILMN_3297754	0006020064	M	175	TGTAGAAGGTGGTGGATACTTGAGCCCTATCCAACTCCGGTTCCCAAAGG				11q13.4a	PREDICTED: Homo sapiens similar to beta-defensin 130 (LOC729523), mRNA.					
Homo sapiens	RefSeq	NM_001005922.1	ILMN_3737	KRTAP5-1	NM_001005922.1	NM_001005922.1		387264	54400748	NM_001005922.1	KRTAP5-1	NP_001005922.1	ILMN_2191003	0003170021	S	669	TGTGTTGCTGTTCCTGTTCCAGTTGTGGCTCTTGCGCGGGGTCTAAGGGA	11	-	1605795-1605844	11p15.5b	Homo sapiens keratin associated protein 5-1 (KRTAP5-1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	KRN1L; KRTAP5.1	KRN1L; KRTAP5.1
Homo sapiens	RefSeq	XM_936442.1	ILMN_45823	MPPED1	XM_936442.1	XM_936442.1		758	89059365	XM_936442.1	MPPED1	XP_941535.1	ILMN_1716362	0002450243	I	710	GGTTCCTGTAGCCAGGGATGTTTATGAGGTCTCTCTGATGCCCCAGGCGC				22q13.2c	PREDICTED: Homo sapiens metallophosphoesterase domain containing 1 (MPPED1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_001035513.1	ILMN_14364	SDHC	NM_001035513.1	NM_001035513.1		6391	78711823	NM_001035513.1	SDHC	NP_001030590.1	ILMN_2323366	0001090301	A	2611	CTCCTACCTTCCTTCTCCTAATTGTGTTACAAGAGGCAGCCATAGCAAGA	1	+	159601077-159601126	1q23.3a	Homo sapiens succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa (SDHC), nuclear gene encoding mitochondrial protein, transcript variant 4, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 2302193] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 16143825] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9533030] [evidence TAS]; A part of the respiratory chain, containing the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain [goid 45273] [pmid 9533030] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [pmid 9533030] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]	Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor. No reaction with quinols [goid 104] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor. No reaction with quinols [goid 104] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor. No reaction with quinols [goid 104] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor. No reaction with quinols [goid 104] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	CYB560; QPS1; CYBL; SDH3; PGL3	CYB560; QPS1; CYBL; SDH3; PGL3
Homo sapiens	RefSeq	NM_019079.2	ILMN_19524	L1TD1	NM_019079.2	NM_019079.2		54596	31542662	NM_019079.2	L1TD1	NP_061952.2	ILMN_1769839	0005490358	S	2939	CTTCTACCCAGAAGGATGGACAGCTAATAGCGTACTTGGGGATGAGGAGC	1	+	62449711-62449760	1p31.3d	Homo sapiens LINE-1 type transposase domain containing 1 (L1TD1), mRNA.				ECAT11; FLJ10884; MGC133253; RP5-1155K23.3	ECAT11; FLJ10884; MGC133253; RP5-1155K23.3
Homo sapiens	RefSeq	NM_002700.1	ILMN_25746	POU4F3	NM_002700.1	NM_002700.1		5459	4505964	NM_002700.1	POU4F3	NP_002691.1	ILMN_1796969	0005550196	S	851	CGGAGAAGCGTTCACTCGAGGCCTATTTCGCTATCCAGCCACGTCCTTCA	5	+	145700034-145700083	5q32d	Homo sapiens POU class 4 homeobox 3 (POU4F3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 7623109] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9506947] [evidence TAS]; The process whose specific outcome is the progression of the vestibulocochlear nerve over time, from its formation to the mature structure. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea [goid 21562] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IEA]; Long distance growth of a single axon process involved in cellular development [goid 48676] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9506947] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	DFNA15; MGC138412; BRN3C	DFNA15; MGC138412; BRN3C
Homo sapiens	RefSeq	NM_174983.2	ILMN_11361	C19ORF28	NM_174983.3	NM_174983.3		126321	111378390	NM_174983.3	C19orf28	NP_778148.2	ILMN_1813374	0002900358	S	1851	CTCTGGAGGATTTGGGGTGCCCCTCTCGGCAGGGAACAGGAAGTAGGAAT	19	-	3544420-3544469	19p13.3e	Homo sapiens chromosome 19 open reading frame 28 (C19orf28), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC20700; PP3501	MGC20700; PP3501
Homo sapiens	RefSeq	NM_032592.3	ILMN_365463	ACCS	NM_032592.3	NM_032592.3		84680	187936923	NM_032592.3	ACCS	NP_115981.1	ILMN_3187680	0003390379	A	2092	TCGCTGTAGCAGTGGGAAACTCCTTAAGCTGTGGTTCAGCCTGGGCCCTC	11	+	44105488-44105537	11p11.2e	Homo sapiens 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) (ACCS), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [pmid 11470512] [evidence IDA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [pmid 11470512] [evidence NAS]; Catalysis of the reaction: L-vinylglutamate + H2O = alpha-ketobutryrate + NH3 [goid 34100] [pmid 11470512] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11470512] [evidence NAS]		
Homo sapiens	RefSeq	NM_031945.2	ILMN_12531	TSPAN10	NM_031945.3	NM_031945.3		83882	119120833	NM_031945.3	TSPAN10	NP_114151.3	ILMN_1656194	0003310097	S	1519	AAGGTCCAGGCCTCTCCCTCCCGAGTGCATTTTTGGGGAGATAGTAAATG	17	+	77226086-77226135	17q25.3f	Homo sapiens tetraspanin 10 (TSPAN10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			OCSP; FLJ39607	OCSP; FLJ39607
Homo sapiens	RefSeq	XM_497653.2	ILMN_35504	LOC441873	XM_497653.2	XM_497653.2		441873	88942371	XM_497653.2	LOC441873	XP_497653.2	ILMN_1652799	0005290609	S	760	GGCCACCTGGACCAGCTGATCAGGAAAGAGCAGAAGAAGGAGATTGTTAC	1	+	13064272-13064294:13064826-13064830:13065159-13065180	1p36.21d	PREDICTED: Homo sapiens similar to PRAME family member 9 (LOC441873), mRNA.					
Homo sapiens	RefSeq	NM_014007.2	ILMN_17837	ZBTB43	NM_014007.2	NM_014007.2		23099	45267833	NM_014007.2	ZBTB43	NP_054726.1	ILMN_1731113	0002060037	S	2610	AGTGCTAAGGTGACACTCCACCAACCAGAGTGAGAGGGCAGATAGGCAGG	9	+	128637022-128637071	9q33.3b	Homo sapiens zinc finger and BTB domain containing 43 (ZBTB43), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ZNF297B; ZBTB22B; ZNF-X	ZNF297B; ZNF-X; ZBTB22B
Homo sapiens	RefSeq	NM_014390.2	ILMN_21857	SND1	NM_014390.2	NM_014390.2		27044	77404396	NM_014390.2	SND1	NP_055205.2	ILMN_1775111	0004480162	S	3135	CTTTCTGGGGCAGACCCTTGTCCTCTGGGATGATGGGCACTGCTATCCAC	7	+	127356594-127356618:127361341-127361365	7q32.1a	Homo sapiens staphylococcal nuclease and tudor domain containing 1 (SND1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7651391] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A ribonucleoprotein complex that contains members of the Argonaute family of proteins, small interfering RNAs (siRNAs) or microRNAs (miRNAs), and miRNA or siRNA-complementary mRNAs, in addition to a number of accessory factors. The RISC complex is involved in posttranscriptional repression of gene expression through downregulation of translation or induction of mRNA degradation [goid 16442] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which double-stranded RNAs silence cognate genes. Involves posttranscriptional gene inactivation ('silencing') both of transgenes or dsRNA introduced into a germline, and of the host gene(s) homologous to the transgenes or dsRNA. This silencing is triggered by the introduction of transgenes or double-stranded RNA (dsRNA), and occurs through a specific decrease in the level of mRNA of both host genes and transgenes [goid 16246] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 7651391] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TDRD11; p100	TDRD11; p100
Homo sapiens	Unigene	Hs.538367	ILMN_103854	HS.538367	Hs.538367		Hs.538367		2726180	AA713906			ILMN_1888055	0002570739	S	82	TTTGAGGACAGGCAGCGACGGGGAAAGGGCACGTTGTTCAGTTTAGAAGC	10	+	101200330-101200379		nv82g01.s1 NCI_CGAP_Br4 Homo sapiens cDNA clone IMAGE:1236336, mRNA sequence					
Homo sapiens	RefSeq	NM_172316.1	ILMN_17649	MEIS2	NM_172316.1	NM_172316.1		4212	27502382	NM_172316.1	MEIS2	NP_758527.1	ILMN_1792995	0000620154	I	429	CTGGGCTGCTTGTTTTGTCTCTGAAATTGACAAGGACGCAGGGAATCCGC	15	-	37391119-37391168	15q14c	Homo sapiens Meis homeobox 2 (MEIS2), transcript variant h, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10764806] [evidence TAS]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10764806] [evidence NAS]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 10764806] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10764806] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 17178831] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC2820; MRG1; HsT18361	MGC2820; MRG1; HsT18361
Homo sapiens	RefSeq	NM_018169.2	ILMN_25641	C12ORF35	NM_018169.2	NM_018169.2		55196	65507252	NM_018169.2	C12orf35	NP_060639.2	ILMN_1726289	0007570477	S	5367	ACGGAAGGATGTAAAGCCTCATCCTAGGAAGGAGCAAGCCCCTCTGCAAG	12	+	32030109-32030158	12p11.21a	Homo sapiens chromosome 12 open reading frame 35 (C12orf35), mRNA.				FLJ20696; FLJ10652	FLJ20696; FLJ10652
Homo sapiens	RefSeq	XM_927663.1	ILMN_42232	LOC644539	XM_927663.1	XM_927663.1		644539	88943031	XM_927663.1	LOC644539	XP_932756.1	ILMN_1742093	0002630458	S	71	GCCTGCCACCACTCATTGGCTGTGAAGTTGAGCTGAGTGCCCTGTTGTCC	1	-	142244718-142244767		PREDICTED: Homo sapiens similar to sorting nexin associated golgi protein 1 (LOC644539), mRNA.					
Homo sapiens	RefSeq	XM_938227.1	ILMN_137442	GAK	XM_938227.1	XM_938227.1		2580	88978847	XM_938227.1	GAK	XP_943320.1	ILMN_1731268	0000130286	I	3714	GAACGACGCGGTTTCCGATGTGTGTTCACTGGTCTCTCTCTGGGTCAGGC				4p16.3c	PREDICTED: Homo sapiens cyclin G associated kinase, transcript variant 2 (GAK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9299234] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]		
Homo sapiens	RefSeq	XM_371476.3	ILMN_43406	LOC388922	XM_371476.3	XM_371476.3		388922	88952978	XM_371476.3	LOC388922	XP_371476.3	ILMN_1655462	0007210315	S	68	CACCGAGCACTGAGCCTCCCATGCAGATGTGTCCCGCTTGTGCACAGGGC	2	+	3811637-3811686		PREDICTED: Homo sapiens hypothetical LOC388922 (LOC388922), mRNA.					
Homo sapiens	RefSeq	XM_372472.2	ILMN_30727	LOC390349	XM_372472.2	XM_372472.2		390349	89035634	XM_372472.2	LOC390349	XP_372472.2	ILMN_1783864	0000110491	A	138	GACGTTCCTGCGTGAGGACAGAGACATCGTGGTTCTGAGGAACTCGCTCA	12	-	83857445-83857494		PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC390349), mRNA.					
Homo sapiens	RefSeq	NM_130784.1	ILMN_10871	SYCE1	NM_130784.1	NM_130784.1		93426	18640753	NM_130784.1	SYCE1	NP_570140.1	ILMN_1732189	0004850750	I	79	CCGGCTCGGCATCTACAGCTACTGGCAGGACACGTCCTCACAGAAAATTG	10	-	135223620-135223647:135231682-135231703	10q26.3f	Homo sapiens synaptonemal complex central element protein 1 (SYCE1), transcript variant 1, mRNA.	A structural unit of the synaptonemal complex found between the lateral elements [goid 801] [pmid 15944401] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; Progression through prophase of meiosis I; divided into several stages [goid 7128] [pmid 15944401] [evidence IC ]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP11-108K14.6; bA108K14.6; C10orf94	RP11-108K14.6; bA108K14.6; C10orf94
Homo sapiens	RefSeq	XM_936648.1	ILMN_42493	LOC388381	XM_936648.1	XM_936648.1		388381	89042648	XM_936648.1	LOC388381	XP_941741.1	ILMN_1814256	0002030301	A	374	TCAATGGAAGGTTTGGCTACCGCAGGAACACTCCAGCCCTCCGTCAGAGC				17q12c	PREDICTED: Homo sapiens hypothetical LOC388381 (LOC388381), mRNA.					
Homo sapiens	RefSeq	XR_079560.1	ILMN_382629	MGC11082	XR_079560.1	XR_079560.1		84777	239756982	XR_079560.1	MGC11082		ILMN_3311160	0006960450	I	411	AATGGATCAAGGAGAGGGAAGCGTTTTGATGGTCCCTGCTCCGAGGTTCA					PREDICTED: Homo sapiens hypothetical LOC84777 (MGC11082), miscRNA.					
Homo sapiens	RefSeq	NM_004029.2	ILMN_10848	IRF7	NM_004029.2	NM_004029.2		3665	98985817	NM_004029.2	IRF7	NP_004020.1	ILMN_2349061	0001470382	A	1471	GCCTCGGAACTGTGACACCCCCATCTTCGACTTCAGAGTCTTCTTCCAAG	11	-	613117-613117:613206-613254	11p15.5d	Homo sapiens interferon regulatory factor 7 (IRF7), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9786932] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9786932] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9315633] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9786932] [evidence TAS]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 9315633] [evidence TAS]	IRF7A; IRF-7H	IRF7A; IRF-7H
Homo sapiens	RefSeq	NM_004030.1	ILMN_10848	IRF7	NM_004029.2	NM_004029.2		3665	98985817	NM_004029.2	IRF7	NP_004020.1	ILMN_1798181	0006400176	A	1750	TGACGACATCGAGTGCTTCCTTATGGAGCTGGAGCAGCCCGCCTAGAACC	11	-	612640-612644:612645-612689	11p15.5d	Homo sapiens interferon regulatory factor 7 (IRF7), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9786932] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9786932] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9315633] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9786932] [evidence TAS]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 9315633] [evidence TAS]	IRF7A; IRF-7H	IRF7A; IRF-7H
Homo sapiens	RefSeq	NM_001973.2	ILMN_7899	ELK4	NM_001973.2	NM_001973.2		2005	41872447	NM_001973.2	ELK4	NP_001964.2	ILMN_2273103	0000510327	I	2832	GAGCTTTGTGCTGAAGAAGTTTTTGGTGGGCTTTAGTGACTGTGCTTTGC	1	-	205585338-205585387	1q32.1g	Homo sapiens ELK4, ETS-domain protein (SRF accessory protein 1) (ELK4), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7851904] [evidence NAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 7851904] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1339307] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	SAP1	SAP1
Homo sapiens	RefSeq	NM_001973.2	ILMN_7899	ELK4	NM_001973.2	NM_001973.2		2005	41872447	NM_001973.2	ELK4	NP_001964.2	ILMN_1771805	0007560382	A	2268	CCACTGGGAATACTGAGCCCATCTCTCCCTACAGCTTCTCTTACACCAGC	1	-	205589106-205589155	1q32.1g	Homo sapiens ELK4, ETS-domain protein (SRF accessory protein 1) (ELK4), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7851904] [evidence NAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 7851904] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1339307] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	SAP1	SAP1
Homo sapiens	RefSeq	NM_001973.2	ILMN_7899	ELK4	NM_001973.2	NM_001973.2		2005	41872447	NM_001973.2	ELK4	NP_001964.2	ILMN_1660886	0004210543	I	2499	GGACCTTCCACCCCTGGCCCATTTTCCCCAGACCTACAGAAGACATAACC	1	-	205585671-205585673:205585674-205585720	1q32.1g	Homo sapiens ELK4, ETS-domain protein (SRF accessory protein 1) (ELK4), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7851904] [evidence NAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 7851904] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1339307] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	SAP1	SAP1
Homo sapiens	RefSeq	NM_000151.2	ILMN_183389	G6PC	NM_000151.2	NM_000151.2		2538	119393889	NM_000151.2	G6PC	NP_000142.1	ILMN_2079890	0005550482	S	2820	GCACCGGGCCCTCCTTGCCTGTTTTTCAATCTCATCTGATATGCAGAGTA	17	+	38318636-38318685	17q21.31a	Homo sapiens glucose-6-phosphatase, catalytic subunit (G6PC), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 7573034] [evidence EXP]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10318794] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 10318794] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5980] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [pmid 8211187] [evidence IMP]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IEA]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [evidence IEA]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [pmid 8211187] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IEA]; The chemical reactions and pathways involving urate, the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals [goid 46415] [evidence IEA]; The chemical reactions and pathways involving glucose 6-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 51156] [evidence IEA]	Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [pmid 10318794] [evidence IDA]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [pmid 7573034] [evidence EXP]; Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [pmid 8211187] [evidence IDA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with phosphate [goid 42301] [pmid 12093795] [evidence IMP]	MGC163350; GSD1a; G6PT	MGC163350; GSD1a; G6PT
Homo sapiens	RefSeq	NM_197953.1	ILMN_33653	CLEC7A	NM_197948.2	NM_197948.2		64581	88999592	NM_197948.2	CLEC7A	NP_922939.1	ILMN_1700610	0006590451	A	75	CCTAGCCCACATGATTTGACTCAGAGATTCTCTTTTGTCCACAGACAGTC	12	-	10282744-10282793	12p13.2c	Homo sapiens C-type lectin domain family 7, member A (CLEC7A), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11567029] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11567029] [evidence TAS]	The series of events in which a stimulus from a yeast is received and converted into a molecular signal [goid 1879] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octomer oligosaccharide [goid 2238] [evidence IEA]; Any series of molecular signals generated as a consequence of binding to a cell surface pattern recognition receptor (PRR). Such receptors bind for molecular patterns based on a repeating or polymeric structures, like those of polysaccharides or peptidoglycans, which are sometimes associated with potential pathogens [goid 2752] [evidence IEA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [pmid 11567029] [evidence IDA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; A series of molecular signals mediated by the detection of carbohydrate [goid 9756] [pmid 11567029] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 11567029] [evidence TAS]; Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism [goid 42832] [pmid 11567029] [evidence NAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IEA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [pmid 11567029] [evidence IDA]; A series of molecular signals mediated by the detection of carbohydrate [goid 9756] [pmid 11567029] [evidence TAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 11567029] [evidence TAS]; Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism [goid 42832] [pmid 11567029] [evidence NAS]	Interacting selectively with an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material [goid 1846] [evidence IEA]; Combining with zymosan to initiate a change in cell activity [goid 1874] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 11567029] [evidence IDA]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [pmid 11567029] [evidence IDA]; Interacting selectively with major histocompatibility complex molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42287] [pmid 11567029] [evidence NAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 11567029] [evidence IDA]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [pmid 11567029] [evidence IDA]; Interacting selectively with major histocompatibility complex molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42287] [pmid 11567029] [evidence NAS]	BGR; DECTIN1; CLECSF12	BGR; DECTIN1; CLECSF12
Homo sapiens	RefSeq	NM_016602.1	ILMN_16435	CCR10	NM_016602.1	NM_016602.1		2826	7705315	NM_016602.1	CCR10	NP_057686.1	ILMN_1666493	0002680753	S	1033	GCCCCGCCTTTCTTCCTGCTCAGCTCCCACGGAGACCCACAGTCTCTCCT	17	-	38085107-38085156	17q21.31a	Homo sapiens chemokine (C-C motif) receptor 10 (CCR10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7851889] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7851889] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	GPR2	GPR2
Homo sapiens	RefSeq	NM_000562.1	ILMN_17023	C8A	NM_000562.1	NM_000562.1		731	4557388	NM_000562.1	C8A	NP_000553.1	ILMN_1710606	0006450403	S	2005	TTGTTCTGCCAGCTTCCAGGCCTAAGACTAGGTTTTGCTGTCTACAGCCA	1	+	57156129-57156178	1p32.2b	Homo sapiens complement component 8, alpha polypeptide (C8A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3052276] [evidence EXP]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [pmid 12413696] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 6771072] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 2820471] [evidence TAS]	Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]			
Homo sapiens	RefSeq	NM_139355.1	ILMN_176610	MATK	NM_139355.2	NM_139355.2		4145	111159469	NM_139355.2	MATK	NP_647612.1	ILMN_1669321	0007160164	I	422	GTTTCCTGGCGGGCATTTCACGGCTGTGATTCTGCTGAGGAACTTCCCCG	19	-	3785062-3785111	19p13.3e	Homo sapiens megakaryocyte-associated tyrosine kinase (MATK), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7530249] [evidence TAS]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [pmid 8288563] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8999872] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8999872] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp434N1212; HHYLTK; CHK; MGC1708; HYLTK; Lsk; MGC2101; CTK; HYL	DKFZp434N1212; HHYLTK; CHK; MGC1708; HYLTK; Lsk; MGC2101; CTK; HYL
Homo sapiens	RefSeq	XM_928905.1	ILMN_41912	LOC645937	XM_928905.2	XM_928905.2		645937	113420827	XM_928905.2	LOC645937	XP_933998.2	ILMN_1679042	0003610669	S	578	CAGAGCTATTGCACCATGAGCGTCCTTCCTCCTTCCTCTCCGGGCTGCCA	9	-	89748939-89748988	9q22.1a	PREDICTED: Homo sapiens similar to zinc finger protein 598 (LOC645937), mRNA.					
Homo sapiens	RefSeq	NM_014281.3	ILMN_14897	PUF60	NM_014281.3	NM_014281.3		22827	17978510	NM_014281.3	PUF60	NP_055096.2	ILMN_1779404	0005050082	A	1686	CTGCGTGACAGTGGTCCCTCTCCCCGGACTTGCACTTGTTCCTTGTTTCC	8	-	144970635-144970677:144970678-144970684	8q24.3g	Homo sapiens poly-U binding splicing factor 60KDa (PUF60), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that phosphorylates cyclin-dependent kinases such as Cdc2 on Thr161 (or an equivalent residue); contains a catalytic subunit and a regulatory subunit, and some examples also include an assembly factor [goid 19907] [pmid 11445587] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18255255] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FIR; RoBPI; SIAHBP1; FLJ31379; PUF60	FIR; RoBPI; SIAHBP1; FLJ31379; PUF60
Homo sapiens	RefSeq	NM_004234.3	ILMN_162402	ZNF235	NM_004234.3	NM_004234.3		9310	12056481	NM_004234.3	ZNF235	NP_004225.2	ILMN_1806782	0000770482	S	2582	CACAGCAGAAAAGTCTTGTCGGAGTCTGCACAGGAGAGAGGCCTTCCTTT	19	-	49482891-49482940	19q13.31b	Homo sapiens zinc finger protein 235 (ZNF235), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ANF270; HZF6; ZNF270; ZFP93	ANF270; HZF6; ZNF270; ZFP93
Homo sapiens	RefSeq	NR_024559.1	ILMN_371761	LOC100128977	NR_024559.1	NR_024559.1		100128977	217035089	NR_024559.1	LOC100128977		ILMN_3247434	0005860725	S	617	TTAGTGTGCGGGAGAGTAACCCTGGGGCCTCCGGAACCAGAAGGGAGGGA	17	-	43920895-43920944	17q21.31e	Homo sapiens hypothetical LOC100128977 (LOC100128977), non-coding RNA.					
Homo sapiens	RefSeq	NM_003112.3	ILMN_168713	SP4	NM_003112.3	NM_003112.3		6671	67010024	NM_003112.3	SP4	NP_003103.2	ILMN_2145997	0001010521	S	5632	ATGCATGTCACTAAGTTGTCATCCCACATAAATTGATGTGCAGCATAGGG	7	+	21518420-21518469	7p15.3d	Homo sapiens Sp4 transcription factor (SP4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 12560508] [evidence IDA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7559627] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 7559627] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC130009; SPR-1; HF1B; MGC130008	MGC130009; SPR-1; HF1B; MGC130008
Homo sapiens	RefSeq	XM_001718183.1	ILMN_345121	CCDC144B	XM_001718183.1	XM_001718183.1		284047	169212082	XM_001718183.1	CCDC144B	XP_001718235.1	ILMN_3232889	0003870592	I	681	TACGTTGCTTCGACAGCAACTGGATGATGCTCACAAGAAAGCTAACAGTC				17p11.2f	PREDICTED: Homo sapiens coiled-coil domain containing 144B (CCDC144B), mRNA.					
Homo sapiens	RefSeq	XM_933536.1	ILMN_43661	LOC646324	XM_933536.1	XM_933536.1		646324	88953936	XM_933536.1	LOC646324	XP_938629.1	ILMN_1752746	0005290349	S	2441	TCACATTATTGGAGGGCCTGAAAGGAAACTGATTCCCGCAAGATGCTCAG	2	-	216185724-216185773	2q35b	PREDICTED: Homo sapiens hypothetical protein LOC646324 (LOC646324), mRNA.					
Homo sapiens	Unigene	Hs.569182	ILMN_121363	HS.569182	Hs.569182		Hs.569182		76555252	DV080139			ILMN_1866255	0006350139	S	396	GATGAAGAGCCCACGCCAGTTTGTGAACGAGAAGCTGAAGTTGTCAGGGG	12	+	79273771-79273820		MGC9.6.1.1.1.F08.F.1 NIH_MGC_331 Homo sapiens cDNA clone MGC9.6.1.1.1.F08, mRNA sequence					
Homo sapiens	Unigene	Hs.561575	ILMN_114955	HS.561575	Hs.561575		Hs.561575		4372453	AI479285			ILMN_1882185	0002000296	S	137	CTGAAGATATAAAGTGCTGATGCCTGGGCGTGCCTGCGTTCGTTGGGGGC	6	+	20509088-20509137		tm56f06.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2162147 3, mRNA sequence					
Homo sapiens	RefSeq	NM_199051.1	ILMN_29635	FAM5C	NM_199051.1	NM_199051.1		339479	39979637	NM_199051.1	FAM5C	NP_950252.1	ILMN_1758943	0003460446	S	2350	CAGAGACCGTGTAAATAAACTCTCCCCACCTGGTCAGCGTCGTCTAGATC	1	-	190067281-190067330	1q31.1d	Homo sapiens family with sequence similarity 5, member C (FAM5C), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			DBCCR1L1; BRINP3; RP11-445K1.1; DBCCR1L	DBCCR1L1; BRINP3; RP11-445K1.1; DBCCR1L
Homo sapiens	RefSeq	NM_199051.1	ILMN_29635	FAM5C	NM_199051.1	NM_199051.1		339479	39979637	NM_199051.1	FAM5C	NP_950252.1	ILMN_2092589	0006100221	S	2417	CGTCATAGACTCAAGCTGTCTACTAGTGAGGTGGTGAGGATCCAATCTGC	1	-	190067214-190067263	1q31.1d	Homo sapiens family with sequence similarity 5, member C (FAM5C), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			DBCCR1L1; BRINP3; RP11-445K1.1; DBCCR1L	DBCCR1L1; BRINP3; RP11-445K1.1; DBCCR1L
Homo sapiens	RefSeq	NM_033506.1	ILMN_3577	FBXO24	NM_033506.2	NM_033506.2		26261	91807115	NM_033506.2	FBXO24	NP_277041.1	ILMN_1686466	0005870612	I	1308	CTTCAAGCCTTTGACCCCCTGGACCAGCAGATGCCGCTTGCTCTCTCACT	7	+	100030723-100030772	7q22.1c	Homo sapiens F-box protein 24 (FBXO24), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]	FBX24; DKFZp434I1122	FBX24; DKFZp434I1122
Homo sapiens	RefSeq	NM_001042669.1	ILMN_183382	ARHGAP24	NM_001042669.1	NM_001042669.1		83478	111154089	NM_001042669.1	ARHGAP24	NP_001036134.1	ILMN_2352633	0000130008	A	3805	ACTCTCCCACTGAGCAAGCGTCTGTGGTCCTATGGTATCAACCAGTATCT	4	+	86923165-86923214	4q21.23b-q21.3a	Homo sapiens Rho GTPase activating protein 24 (ARHGAP24), transcript variant 3, mRNA.				FILGAP; p73RhoGAP; FLJ33877; RC-GAP72; DKFZP564B1162; p73; RCGAP72	FILGAP; FLJ33877; DKFZP564B1162; p73; RCGAP72; p73RhoGAP; RC-GAP72
Homo sapiens	RefSeq	NR_003210.1	ILMN_164683	SNORD114-17	NR_003210.1	NR_003210.1		767595	115392015	NR_003210.1	SNORD114-17		ILMN_3309428	0000730309	S	22	GGCATTGGAGTTATGGACGATGAATGATATGTGTCTGAAACTCTGAGGTC	14	+	100510917-100510966	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 114-17 (SNORD114-17), small nucleolar RNA.				14q(II-17)	14q(II-17)
Homo sapiens	Unigene	Hs.580169	ILMN_132350	HS.580169	Hs.580169		Hs.580169		83149334	DB338170			ILMN_1855966	0002570372	S	282	CAAGCATGGGAGTTGGAGGTGAGGATGAGTGCCAGGTGCCTTCTTTGCCC	2	+	130342467-130342516		DB338170 TESTI2 Homo sapiens cDNA clone TESTI2033861 3, mRNA sequence					
Homo sapiens	RefSeq	XM_928412.1	ILMN_38164	LOC645373	XM_928412.1	XM_928412.1		645373	89025614	XM_928412.1	LOC645373	XP_933505.1	ILMN_1784763	0005960241	S	165	CCAGCGTGCTGTTGCAAACAGACAAGGGCAAGATTCCTGCCGAGAGAATT	7	+	158205364-158205413	7q36.3e	PREDICTED: Homo sapiens similar to 60S ribosomal protein L21 (LOC645373), mRNA.					
Homo sapiens	RefSeq	XM_926757.1	ILMN_34987	LOC643422	XM_926757.1	XM_926757.1		643422	89038084	XM_926757.1	LOC643422	XP_931850.1	ILMN_1800689	0004760709	S	454	GTCCTGTGGAGTTTCAGGCAATGAAGTGAACATAAGTCCAGGTCATCGAT	15	-	26620840-26620866:26620867-26620879:26620972-26620981		PREDICTED: Homo sapiens similar to hect domain and RLD 2 (LOC643422), mRNA.					
Homo sapiens	Unigene	Hs.566890	ILMN_119133	HS.566890	Hs.566890		Hs.566890		5540902	AI867886			ILMN_1915365	0006130397	S	137	AAGGGGGTCCTGTAAGCAGGTTTCCACCTCCCAGATTTAATACCAGAGCC					wb37h11.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2307909 3, mRNA sequence					
Homo sapiens	RefSeq	NM_031415.1	ILMN_15792	GSDMC	NM_031415.2	NM_031415.2		56169	93204877	NM_031415.2	GSDMC	NP_113603.1	ILMN_1721732	0004220189	S	2431	GTCCAGAGATGCTGGCCCTCGCCCAGTCTATGCTGTGAGTGTCCTTATGG	8	-	130829857-130829906	8q24.21c	Homo sapiens gasdermin C (GSDMC), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11223543] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	Unigene	Hs.558288	ILMN_113165	HS.558288	Hs.558288		Hs.558288		29390431	CB529590			ILMN_1915989	0007150653	S	357	GCTGTGCCAACAAATAGTGGGGCGGGTATCGTGGAGGAGGATTCAAGGCG	9	-	89518666-89518668:89521445-89521491		UI-H-FT2-bjh-d-23-0-UI.s1 NCI_CGAP_FT2 Homo sapiens cDNA clone UI-H-FT2-bjh-d-23-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000878.2	ILMN_19931	IL2RB	NM_000878.2	NM_000878.2		3560	23238195	NM_000878.2	IL2RB	NP_000869.1	ILMN_1684349	0000290402	S	3681	GGGGCTCCACACCTTTGCTGTGTGTTCTGGGGCAACCTACTAATCCTCTC	22	-	37522192-37522241	22q12.3d	Homo sapiens interleukin 2 receptor, beta (IL2RB), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2467293] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8514792] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 2467293] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2785715] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 7736574] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [pmid 7736574] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with interleukin-2 [goid 19976] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with interleukin-2 [goid 19976] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with interleukin-2 [goid 19976] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with interleukin-2 to initiate a change in cell activity [goid 4911] [pmid 2467293] [evidence TAS]	CD122; P70-75	CD122; P70-75
Homo sapiens	RefSeq	XM_934857.1	ILMN_36094	LOC653591	XM_934857.1	XM_934857.1		653591	88942387	XM_934857.1	LOC653591	XP_939950.1	ILMN_1768261	0007650681	A	1302	CAGCCCTTTCCAGCCCCATCAGACATTTCAGGGAATTGAAATGAACATGC	1	+	14020107-14020156		PREDICTED: Homo sapiens similar to PR domain containing 2, with ZNF domain, transcript variant 2 (LOC653591), mRNA.					
Homo sapiens	RefSeq	NM_018192.2	ILMN_11123	LEPREL1	NM_018192.2	NM_018192.2		55214	27764881	NM_018192.2	LEPREL1	NP_060662.2	ILMN_1657373	0004280524	S	3309	CCATGGCCAGGTTGCCTAGGAGTGGGGTCCACTGATGAAAAGAGGTGTTT	3	-	191157361-191157410	3q28b-q28c	Homo sapiens leprecan-like 1 (LEPREL1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2 [goid 19797] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ10718; MLAT4; P3H2	FLJ10718; MLAT4; P3H2
Homo sapiens	RefSeq	NM_152654.2	ILMN_10342	DAND5	NM_152654.2	NM_152654.2		199699	71164889	NM_152654.2	DAND5	NP_689867.1	ILMN_2230178	0003370441	S	1441	GGAGGGTAGATGGCCCCACCCAGACCGAGAGACACAGTGATGACCTCAGC	19	+	12946276-12946325	19p13.13c	Homo sapiens DAN domain family, member 5 (DAND5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IEA]		GREM3; CRL2; CER2; CKTSF1B3; MGC126849; DANTE; SP1; COCO	GREM3; CKTSF1B3; MGC126849; DANTE; COCO; CRL2; CER2; SP1
Homo sapiens	RefSeq	NM_032606.2	ILMN_2288	CAPS2	NM_032606.2	NM_032606.2		84698	24475723	NM_032606.2	CAPS2	NP_115995.1	ILMN_1747105	0006110114	S	3361	CCATCTATACTTGGCAGCAACATGAGAAGTGTGATACATGTGAACCCAAC	12	-	73957696-73957745	12q21.1c	Homo sapiens calcyphosine 2 (CAPS2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ34520; UG0636c06	FLJ34520; UG0636c06
Homo sapiens	RefSeq	NR_030237.1	ILMN_387937	MIR510	NR_030237.1	NR_030237.1		574515	262205549	NR_030237.1	MIR510		ILMN_3310690	0001450180	S	7	CCTACTCAGGAGAGTGGCAATCACATGTAATTAGGTGTGATTGAAACCTC				Xq27.3e	Homo sapiens microRNA 510 (MIR510), microRNA.					
Homo sapiens	RefSeq	NM_001033047.1	ILMN_20015	NPNT	NM_001033047.1	NM_001033047.1		255743	75709197	NM_001033047.1	NPNT	NP_001028219.1	ILMN_1735762	0005910398	S	4241	GAAGGTCTTCTGTCATTTAACCTGGTAAAGGCAGGGCTGGAGGGGGAAAA	4	+	106892485-106892534	4q24e	Homo sapiens nephronectin (NPNT), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Branching of the ureteric bud [goid 1658] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EGFL6L; POEM	EGFL6L; POEM
Homo sapiens	RefSeq	NM_144715.2	ILMN_164106	EFHB	NM_144715.3	NM_144715.3		151651	148613875	NM_144715.3	EFHB	NP_653316.3	ILMN_1704617	0002470113	S	2347	CCCCATTTGTGGTGTTCCAACCATTCGATCTGACATTCCTGCTCCCCGAA	3	-	19949798-19949847	3p24.3c	Homo sapiens EF-hand domain family, member B (EFHB), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ25200	FLJ25200
Homo sapiens	RefSeq	XR_041989.1	ILMN_338130	C12ORF33	XR_041989.1	XR_041989.1		253128	169205167	XR_041989.1	C12orf33		ILMN_3180113	0001690278	A	1552	TGCAGCAAAAGAACAGCCCCTGATGTACGCCTGTTTCCTGAATATTTGGA				12p13.31a	PREDICTED: Homo sapiens misc_RNA (C12orf33), miscRNA.					
Homo sapiens	RefSeq	XR_041989.1	ILMN_338130	C12ORF33	XR_041989.1	XR_041989.1		253128	169205167	XR_041989.1	C12orf33		ILMN_3256573	0002680025	M	1885	GGATGAAGACTGATGCTAAGGAAAAAGAGATGAGGCCTCCCTGGTTCCGC				12p13.31a	PREDICTED: Homo sapiens misc_RNA (C12orf33), miscRNA.					
Homo sapiens	RefSeq	NM_002869.4	ILMN_25448	RAB6A	NM_002869.4	NM_002869.4		5870	38679893	NM_002869.4	RAB6A	NP_002860.2	ILMN_1800871	0005720091	A	2856	TCCCCTCATTGGAACAAAACCTTAAACTGGGAGAACCTTAGTCCCCTCTC	11	-	73387185-73387234	11q13.4b	Homo sapiens RAB6A, member RAS oncogene family (RAB6A), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15229288] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 2501306] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12391317] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAB6B; RAB6A'; RAB6	RAB6B; RAB6A'; RAB6
Homo sapiens	RefSeq	XM_001719651.1	ILMN_344487	LOC730291	XM_001719651.1	XM_001719651.1		730291	169171768	XM_001719651.1	LOC730291	XP_001719703.1	ILMN_3302476	0001740403	M	319	CTCCAAAAAGTAATACCAAGAACATATGGAAAATGTGGACATGAGAATTT				7q11.21c	PREDICTED: Homo sapiens similar to Zinc finger protein 679 (LOC730291), mRNA.					
Homo sapiens	RefSeq	NM_148173.1	ILMN_15408	PEMT	NM_148173.1	NM_148173.1		10400	22538479	NM_148173.1	PEMT	NP_680478.1	ILMN_1689116	0007330315	I	1	GGCGAGGAGAGGCACACCACTATTGTTTTAATTTGCTTTTACCTGATTCC	17	-	17480729-17480778	17p11.2g	Homo sapiens phosphatidylethanolamine N-methyltransferase (PEMT), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9989271] [evidence TAS]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [pmid 9989271] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9989271] [evidence TAS]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidylethanolamine = S-adenosyl-L-homocysteine + phosphatidyl-N-methylethanolamine [goid 4608] [pmid 9989271] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PEAMT; MGC2483; PEMPT; PNMT; PEMT2	PEAMT; PEMPT; PNMT; MGC2483; PEMT2
Homo sapiens	RefSeq	NM_181725.2	ILMN_23067	METTL2A	NM_181725.2	NM_181725.2		339175	52856441	NM_181725.2	METTL2A	NP_859076.2	ILMN_1745699	0001240646	A	2141	CTTAGTTCCATGGAATTTTAAGCATTGTTCCCCCTCTAACCTGTGTCTAA	17	+	57880828-57880877	17q23.2d	Homo sapiens methyltransferase like 2A (METTL2A), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	METTL2; FLJ12760	METTL2; FLJ12760
Homo sapiens	RefSeq	NR_031669.1	ILMN_388728	MIR548O	NR_031669.1	NR_031669.1		100313829	269847356	NR_031669.1	MIR548O		ILMN_3310266	0000380673	S	46	CATGGTTTGAGCCTAGTTACAATGATCTAAAATTCACGGTCCAAAACTGC					Homo sapiens microRNA 548o (MIR548O), microRNA.					
Homo sapiens	RefSeq	XM_001722049.1	ILMN_347068	LOC100134178	XM_001722049.1	XM_001722049.1		100134178	169217639	XM_001722049.1	LOC100134178	XP_001722101.1	ILMN_3245217	0002710482	S	257	TGGTCAGCCACAGCGGTGTTGGGGGAGGACGGCAGAGTAAGGAAAGGCAT					PREDICTED: Homo sapiens hypothetical protein LOC100134178 (LOC100134178), mRNA.					
Homo sapiens	RefSeq	NM_000533.3	ILMN_162696	PLP1	NM_000533.3	NM_000533.3		5354	41349498	NM_000533.3	PLP1	NP_000524.3	ILMN_1709919	0005570491	I	539	GAGGGGTTCCAGAGGCCAACATCAAGCTCATTCTTTGGAGCGGGTGTGTC	X	+	102928227-102928276	Xq22.2a	Homo sapiens proteolipid protein 1 (PLP1), transcript variant 1, mRNA.	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]	The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 2479017] [evidence TAS]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [pmid 2479017] [evidence TAS]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 2479017] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PLP/DM20; PMD; SPG2; MMPL; PLP	PLP/DM20; PMD; SPG2; MMPL; PLP
Homo sapiens	RefSeq	NM_152671.2	ILMN_27812	PIP5K3	NM_152671.2	NM_152671.2		200576	50881948	NM_152671.2	PIP5K3	NP_689884.1	ILMN_1743535	0001500475	A	1216	CCGACAGTGACTCAGTGAACTCCGTGGAAGGACACTCTGAGCCATCCTGG	2	+	208877168-208877217	2q33.3d	Homo sapiens phosphatidylinositol-3-phosphate/phosphatidylinositol 5-kinase, type III (PIP5K3), transcript variant 3, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [pmid 16954148] [evidence IDA]; The lipid bilayer surrounding an early endosome [goid 31901] [pmid 16448788] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 15046600] [evidence IDA]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 14551253] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [pmid 16954148] [evidence IMP]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [pmid 14551253] [evidence IMP]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]; The directed movement of a protein to a specific location [goid 45184] [pmid 17909029] [evidence IMP]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17909029] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [pmid 15046600] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	PIKfyve; KIAA0981; PIP5K; CFD; MGC40423	PIKfyve; KIAA0981; PIP5K; CFD; MGC40423
Homo sapiens	RefSeq	NM_032040.1	ILMN_13081	CCDC8	NM_032040.2	NM_032040.2		83987	141802413	NM_032040.2	CCDC8	NP_114429.1	ILMN_1760314	0002940538	S	2344	GAGGCCAGAGCAGAAGCTGAGCAGGGAGAGCAAGAAGACCAGCTGTGAGG	19	-	51606288-51606290:51606291-51606337	19q13.32b	Homo sapiens coiled-coil domain containing 8 (CCDC8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]			DKFZP564K0322	DKFZP564K0322
Homo sapiens	RefSeq	NM_001004330.1	ILMN_18484	PLEKHG7	NM_001004330.1	NM_001004330.1		440107	51972239	NM_001004330.1	PLEKHG7	NP_001004330.1	ILMN_1664499	0003460632	S	3172	GGGATCACGGGGGTCAGAACAAAAACCATTCTAGAACCGTGGCTCCCAGG	12	+	91689950-91689999	12q22a	Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 7 (PLEKHG7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	FLJ46688	FLJ46688
Homo sapiens	Unigene	Hs.583323	ILMN_135504	HS.583323	Hs.583323		Hs.583323		23274332	BU608117			ILMN_1818981	0001400609	S	129	AATGGGGCTTCCCAGAATCAGAAACCCTGGCAGCATGGTCAGTCATCTGC	7	+	51672426-51672475		UI-CF-FN0-aew-k-13-0-UI.s1 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-aew-k-13-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001725504.1	ILMN_335724	LOC100127971	XM_001725504.1	XM_001725504.1		100127971	169204082	XM_001725504.1	LOC100127971	XP_001725556.1	ILMN_3253857	0000730066	M	4010	AGAGGCCCATAAAACCTCTCTTCACCTAATCCACCTGGCAGAGCCCTCAG	12	+	50491398-50491447	12q13.13c	PREDICTED: Homo sapiens hypothetical protein LOC100127971 (LOC100127971), mRNA.					
Homo sapiens	RefSeq	NM_174981.2	ILMN_14441	ANKRD21	NM_174981.2	NM_174981.2		317754	31343345	NM_174981.2	ANKRD21	NP_778146.1	ILMN_1671812	0004490414	S	1618	CTTGCGTGAAAACAGCGTGTTGCAGGAAGAAATTGCCGTGCTAAGACTGG	21	+	13935569-13935618	21q11.2b	Homo sapiens ankyrin repeat domain 21 (ANKRD21), mRNA.				POTE-21; POTE21; POTE	POTE-21; POTE21; POTE
Homo sapiens	RefSeq	NM_203286.1	ILMN_12689	PVRL1	NM_203286.1	NM_203286.1		5818	42560232	NM_203286.1	PVRL1	NP_976031.1	ILMN_1744815	0001740592	I	1196	CCGGGCAAAGGGAGGACAAGAGCTAGGATGTTCTGAGGAGAGACTTCACC	11	-	119545287-119545301:119545302-119545336	11q23.3f	Homo sapiens poliovirus receptor-related 1 (herpesvirus entry mediator C) (PVRL1), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [pmid 12885915] [evidence NAS]; An adherens junction which connects two cells to each other [goid 5913] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10932188] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10932188] [evidence NAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence ISS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which a virion enters a host cell, including virion attachment and penetration [goid 46718] [pmid 12885915] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 9616127] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]	PVRR; SK-12; PVRR1; nectin-1; PRR; CD111; CLPED1; MGC16207; MGC142031; OFC7; HVEC; PRR1; ED4; HIgR	PVRR; SK-12; PVRR1; nectin-1; PRR; CD111; CLPED1; MGC16207; MGC142031; OFC7; HVEC; PRR1; ED4; HIgR
Homo sapiens	RefSeq	XM_927190.1	ILMN_307407	SLED1	NR_003542.1	NR_003542.1		643036	148237772	NR_003542.1	SLED1		ILMN_1673322	0002750601	S	127	GATGAGAACCTTTGTAATTGCTGAAGGAGGTAGTAGTGCAGGCAAGTCCT	4	-	185957018-185957067	4q35.1e	Homo sapiens RTFV9368 (SLED1), non-coding RNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_006720.3	ILMN_21737	ABLIM1	NM_006720.3	NM_006720.3		3983	51173716	NM_006720.3	ABLIM1	NP_006711.3	ILMN_1785424	0002570112	A	6603	GAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGC	10	-	116192405-116192454	10q25.3a	Homo sapiens actin binding LIM protein 1 (ABLIM1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9245787] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9245787] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9245787] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 9245787] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0059; FLJ14564; MGC1224; LIMATIN; LIMAB1; DKFZp781D0148; ABLIM	KIAA0059; FLJ14564; MGC1224; LIMATIN; LIMAB1; DKFZp781D0148; ABLIM
Homo sapiens	RefSeq	NM_006720.3	ILMN_21737	ABLIM1	NM_006720.3	NM_006720.3		3983	51173716	NM_006720.3	ABLIM1	NP_006711.3	ILMN_1731610	0003610315	I	141	AGTCTGTCGGGCTGAGGTCTGGCATCTACAAAGCCTCTTGGCCGTGTTCT	10	-	116286495-116286544	10q25.3a	Homo sapiens actin binding LIM protein 1 (ABLIM1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9245787] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9245787] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9245787] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 9245787] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0059; FLJ14564; MGC1224; LIMATIN; LIMAB1; DKFZp781D0148; ABLIM	KIAA0059; FLJ14564; MGC1224; LIMATIN; LIMAB1; DKFZp781D0148; ABLIM
Homo sapiens	RefSeq	XR_018424.1	ILMN_172685	LOC728344	XR_018424.1	XR_018424.1		728344	113417905	XR_018424.1	LOC728344		ILMN_3303075	0005560491	M	756	GTCTTTAGATCAAGAGGTTCGACAGGGGCTCAAAGCCTATTCCAATTGGC				6p25.2a	PREDICTED: Homo sapiens misc_RNA (LOC728344), miscRNA.					
Homo sapiens	Unigene	Hs.303060	ILMN_85473	HS.303060	Hs.303060		Hs.303060		27844293	BX100093			ILMN_1866935	0000780113	S	430	CCACCCACTGAGGCACCTTATTTTCCCACTGCCCCCGACTCCAAAAATAG	X	+	100776960-100777009		BX100093 Soares_pregnant_uterus_NbHPU Homo sapiens cDNA clone IMAGp998M121115, mRNA sequence					
Homo sapiens	RefSeq	NM_004274.3	ILMN_26966	AKAP6	NM_004274.3	NM_004274.3		9472	21493044	NM_004274.3	AKAP6	NP_004265.3	ILMN_1770758	0001510224	S	10002	AAATCTGCCTAGTACCCCGCTACCCTGTTCTGTCTTATGGAGCAGCCCAG	14	+	32371678-32371727	14q13.1a	Homo sapiens A kinase (PRKA) anchor protein 6 (AKAP6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [pmid 7721854] [evidence IDA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 10413680] [evidence NAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 7721854] [evidence NAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10413680] [evidence NAS]	ADAP6; AKAP100; mAKAP; PRKA6; KIAA0311; ADAP100; MGC165020	PRKA6; ADAP6; AKAP100; mAKAP; KIAA0311; ADAP100; MGC165020
Homo sapiens	RefSeq	XR_019644.1	ILMN_179094	LOC390298	XR_019644.1	XR_019644.1		390298	113423682	XR_019644.1	LOC390298		ILMN_3204838	0007550725	A	1103	TCCTCCTCACTCGCTACACGGCCCAGCAGTTCCAAAATGTGCCCTTGTTG				12p12.3c	PREDICTED: Homo sapiens similar to translocase of inner mitochondrial membrane 17 homolog B (LOC390298), miscRNA.					
Homo sapiens	RefSeq	NM_172208.1	ILMN_23611	TAPBP	NM_172208.1	NM_172208.1		6892	27436894	NM_172208.1	TAPBP	NP_757345.1	ILMN_1773031	0003940296	I	2129	TCTCAAAACCCATGGAGGGAGGCTGCTGGTGTGGTAGGCAGAACCTAGGC	6	-	33379604-33379653	6p21.32a	Homo sapiens TAP binding protein (tapasin) (TAPBP), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 11884415] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9238042] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9271576] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11884415] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 11884415] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9238042] [evidence TAS]; A large, multisubunit complex which consists of the MHC class I-beta 2 microglobulin dimer, the transporter associated with antigen presentation (TAP), tapasin (an MHC-encoded membrane protein), the chaperone calreticulin and the thiol oxidoreductase ERp57. Functions in the assembly of peptides with newly synthesized MHC class I molecules [goid 42824] [pmid 12788224] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9271576] [evidence TAS]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11884415] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9271576] [evidence TAS]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded [goid 50823] [evidence ISS]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [evidence IEA]	Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate [goid 15433] [pmid 9238042] [evidence TAS]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 12788224] [evidence TAS]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [pmid 12788224] [evidence TAS]; Interacting selectively with the TAP1 subunit of TAP (transporter associated with antigen processing) protein [goid 46978] [pmid 12788224] [evidence TAS]; Interacting selectively with the TAP2 subunit of TAP (transporter associated with antigen processing) protein [goid 46979] [pmid 12788224] [evidence TAS]; Interacting selectively with an unfolded protein [goid 51082] [pmid 12788224] [evidence TAS]	TAPA; NGS17; TPSN; TPN	TAPA; NGS17; TPSN; TPN
Homo sapiens	RefSeq	NM_205768.1	ILMN_5128	ZNF238	NM_205768.1	NM_205768.1		10472	45439301	NM_205768.1	ZNF238	NP_991331.1	ILMN_2399686	0001690315	A	3035	CCCCCCACCACCACCCTCCACCCCCAACTCATGAAAAGATTCTATGGACT	1	+	242286585-242286634	1q44a	Homo sapiens zinc finger protein 238 (ZNF238), transcript variant 1, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 9756912] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9013868] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9756912] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9013868] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9756912] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9770450] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9013868] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP58; ZBTB18; TAZ-1; C2H2-171	RP58; ZBTB18; TAZ-1; C2H2-171
Homo sapiens	RefSeq	NM_205768.1	ILMN_5128	ZNF238	NM_205768.1	NM_205768.1		10472	45439301	NM_205768.1	ZNF238	NP_991331.1	ILMN_1663155	0003870639	I	90	TCCACCGATGTAACAGACCTGGAGCCAGCAGGACTCAGAGGAAAGGACTT	1	+	242281297-242281346	1q44a	Homo sapiens zinc finger protein 238 (ZNF238), transcript variant 1, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 9756912] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9013868] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9756912] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9013868] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9756912] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9770450] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9013868] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP58; ZBTB18; TAZ-1; C2H2-171	RP58; ZBTB18; TAZ-1; C2H2-171
Homo sapiens	RefSeq	NM_018029.3	ILMN_29061	FLJ10213	NM_018029.3	NM_018029.3		55096	40538805	NM_018029.3	FLJ10213	NP_060499.3	ILMN_2186877	0003180324	S	1466	GCAACAGCGGCAAACTACTGGGCCAAGATGAGCAACCCCACATTTTTGGG	3	+	73112275-73112324	3p13b	Homo sapiens hypothetical protein FLJ10213 (FLJ10213), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_002371.2	ILMN_3411	MAL	NM_002371.2	NM_002371.2		4118	12408666	NM_002371.2	MAL	NP_002362.1	ILMN_2320330	0006330196	A	534	ACTTGAGCTGAAAACCCAGATGGTGTTAACTGGCCGCCCCACTTTCCGGC	2	+	95082940-95082989	2q11.1c	Homo sapiens mal, T-cell differentiation protein (MAL), transcript variant a, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 9003426] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8132541] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9003426] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 10739088] [evidence TAS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 12153479] [evidence IDA]	The clustering and aggregation of membrane rafts at a single cellular pole during activation of particular cell types, such as lymphocytes [goid 1766] [pmid 12153479] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10366425] [evidence NAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 10739088] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 10739088] [evidence TAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 12153479] [evidence NAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 10428054] [evidence TAS]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [pmid 10739088] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [pmid 10739088] [evidence TAS]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [pmid 3494249] [evidence TAS];  [goid 16505] [pmid 10366425] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [pmid 12153479] [evidence IDA]		
Homo sapiens	RefSeq	NR_002836.1	ILMN_19104	PGM5P2	NR_002836.1	NR_002836.1		595135	84872126	NR_002836.1	PGM5P2		ILMN_2069399	0001410142	S	1198	CCAACCAGCATGGCCCTGGACAGAGAGACATCTGGTGATACTATCTGTTG	9	-	68394534-68394561:68402660-68402681	9q12i	Homo sapiens phosphoglucomutase 5 pseudogene 2 (PGM5P2) on chromosome 9.					
Homo sapiens	RefSeq	XR_001072.1	ILMN_19104	PGM5P2	NR_002836.1	NR_002836.1		595135	84872126	NR_002836.1	PGM5P2		ILMN_1702760	0004900091	S	403	ATCGAGATCGTGGTGCAGATGGCCGCGGCCAACGGGATTGGATGACTGAT	9	-	68416934-68416948:68437237-68437271	9q12i	Homo sapiens phosphoglucomutase 5 pseudogene 2 (PGM5P2) on chromosome 9.					
Homo sapiens	RefSeq	NM_017931.1	ILMN_11243	FLJ20699	NM_017931.1	NM_017931.1		55020	8923627	NM_017931.1	FLJ20699	NP_060401.1	ILMN_1692464	0001450309	S	2299	CCTCTGTCTCCTGCTTCCTCACTGAACGCCTGCTGAATGTGCCGCTGACT	22	+	45068302-45068351	22q13.31d	Homo sapiens hypothetical protein FLJ20699 (FLJ20699), mRNA.					
Homo sapiens	RefSeq	NM_003196.1	ILMN_27218	TCEA3	NM_003196.1	NM_003196.1		6920	41350334	NM_003196.1	TCEA3	NP_003187.1	ILMN_1726928	0004050491	S	1097	ACCAGGTGCAGACACGCAGTGCTGATGAGCCCATGACTACCTTTGTCTTA	1	-	23710865-23710910:23713766-23713769	1p36.12a	Homo sapiens transcription elongation factor A (SII), 3 (TCEA3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TFIIS.H; TFIIS	TFIIS.H; TFIIS
Homo sapiens	RefSeq	NR_024540.1	ILMN_370616	WASH5P	NR_024540.1	NR_024540.1		653635	215277009	NR_024540.1	WASH5P		ILMN_3239735	0001450039	S	1094	CAGGGAAGTGGTTGACCCCTCCGGTGGCTGGCCACTCTGCTAGAGTCCAT	1	-	15884-15933	1p36.33b	Homo sapiens WAS protein family homolog 5 pseudogene (WASH5P), non-coding RNA.					
Homo sapiens	RefSeq	XM_001720054.1	ILMN_339067	LOC100133459	XM_001720054.1	XM_001720054.1		100133459	169218085	XM_001720054.1	LOC100133459	XP_001720106.1	ILMN_3238893	0000240278	S	1975	GCCTATCACTCTGGACTGTTGGATTGTTTTTTACATTCAGCGTTATAATC					PREDICTED: Homo sapiens hypothetical protein LOC100133459 (LOC100133459), partial mRNA.					
Homo sapiens	RefSeq	NM_001031715.1	ILMN_7048	IQCH	NM_001031715.1	NM_001031715.1		64799	72534719	NM_001031715.1	IQCH	NP_001026885.1	ILMN_1714960	0004610121	A	2543	GGAACAACAGGTGTGGGCAACCGGCCTTAACCTCGCATATAGTGACCAGC	15	+	65500960-65500969:65544519-65544558	15q23a	Homo sapiens IQ motif containing H (IQCH), transcript variant 1, mRNA.				FLJ12476; DKFZp434F2114	FLJ12476; DKFZp434F2114
Homo sapiens	RefSeq	NM_016841.2	ILMN_3284	MAPT	NM_016841.2	NM_016841.2		4137	82534391	NM_016841.2	MAPT	NP_058525.1	ILMN_2310814	0002630176	A	5210	GCACTGGCCTAGAGCCTCACCTCCTAATAGACTTAGCCCCATGAGTTTGC	17	+	41461293-41461342	17q21.31e	Homo sapiens microtubule-associated protein tau (MAPT), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10747907] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 10747907] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8522593] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [pmid 8642405] [evidence IDA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [pmid 8642405] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A heterodimer of tubulins alpha and beta that constitutes the protomer for microtubule assembly [goid 45298] [evidence ISS]; A heterodimer of tubulins alpha and beta that constitutes the protomer for microtubule assembly [goid 45298] [pmid 8642405] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [pmid 1057175] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [pmid 1421571] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of axon extension [goid 45773] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of axon extension [goid 45773] [pmid 1389180] [evidence IDA]; The process by which nerve cells are generated. This includes the production of neuroblasts and their differentiation into neurons [goid 48699] [pmid 8522593] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 2498079] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 1918161] [evidence IDA]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [pmid 7972031] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 9763511] [evidence IPI]; Interacting selectively with any enzyme [goid 19899] [pmid 12888622] [evidence IPI]; Interacting selectively with any enzyme [goid 19899] [pmid 9736630] [evidence IPI]; Interacting selectively with any enzyme [goid 19899] [pmid 12888622] [evidence IPI]; Interacting selectively with apolipoprotein E [goid 34187] [pmid 7566652] [evidence IPI]	MTBT2; MAPTL; FTDP-17; DDPAC; MGC138549; TAU; MSTD; FLJ31424; PPND; MTBT1	MTBT2; MAPTL; FTDP-17; TAU; MSTD; FLJ31424; MTBT1; DDPAC; MGC138549; PPND
Homo sapiens	Unigene	Hs.577453	ILMN_129634	HS.577453	Hs.577453		Hs.577453		83132279	DB337954			ILMN_1911171	0002350239	S	45	CTGCAGGTCAGCAGAAATTTTTCACTCAGCCACCCCTCTCCCAGATTCCC	12	-	109185839-109185888		DB337954 TESTI2 Homo sapiens cDNA clone TESTI2029897 3, mRNA sequence					
Homo sapiens	Unigene	Hs.514454	ILMN_98671	HS.514454	Hs.514454		Hs.514454		3648059	AI140602			ILMN_1885762	0001010026	S	185	AGCTCTCTCCCACATGCAGGGTGGGGTCTTGCAAACAGGAGGACGCTTCT	17	+	69402652-69402701		qe05e12.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1738126 3, mRNA sequence					
Homo sapiens	Unigene	Hs.557800	ILMN_112988	HS.557800	Hs.557800		Hs.557800		5452054	AI831383			ILMN_1861567	0007200196	S	342	GTGTACATCCCATTAAGGGAGAAAAGATCTTCTACACAATGGATTGGACC	9	+	42834711-42834760		wj57c10.x1 NCI_CGAP_Lu19 Homo sapiens cDNA clone IMAGE:2406930 3, mRNA sequence					
Homo sapiens	Unigene	Hs.145307	ILMN_78187	HS.145307	Hs.145307		Hs.145307		10840752	AV731331			ILMN_1824297	0000060139	S	425	GAAAGGGGAGTTTAAGCCTTTGCATGTTGACATTGTTCCTTCCCCGCGCC	12	-	88505274-88505323		AV731331 HTF Homo sapiens cDNA clone HTFBAA12 5, mRNA sequence					
Homo sapiens	RefSeq	NM_022963.2	ILMN_29492	FGFR4	NM_022963.2	NM_022963.2		2264	47524176	NM_022963.2	FGFR4	NP_075252.2	ILMN_2241412	0004120433	I	1129	ACCTCACATGTGACAGCCTGACTCCAGCAGGCAGAACCAAGTCTCCCACT	5	+	176452957-176453006	5q35.2d	Homo sapiens fibroblast growth factor receptor 4 (FGFR4), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16597617] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11294897] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10918587] [evidence TAS]	The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 10918587] [evidence TAS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 10918587] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TKF; MGC20292; CD334; JTK2	TKF; MGC20292; CD334; JTK2
Homo sapiens	RefSeq	XM_932357.1	ILMN_39551	LOC644769	XM_932357.1	XM_932357.1		644769	89029637	XM_932357.1	LOC644769	XP_937450.1	ILMN_1689475	0003710121	S	140	GCCGGCAGAAAGCCCATGAGAGGAAGCTCCTGCTTCAGGTGCAGAAACAC	9	+	69889948-69889973:69902295-69902318		PREDICTED: Homo sapiens hypothetical protein LOC644769 (LOC644769), mRNA.					
Homo sapiens	RefSeq	NM_004831.3	ILMN_14940	MED26	NM_004831.3	NM_004831.3		9441	73088830	NM_004831.3	MED26	NP_004822.2	ILMN_1718171	0000730468	S	2534	AGTGGGCCATGCCACTGCCTCTGTTTGCTCCCTACCCAGCCACTGTCAGG	19	-	16686318-16686367	19p13.11f	Homo sapiens mediator complex subunit 26 (MED26), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 15989967] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 15989967] [evidence IDA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 9989412] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9989412] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 15989967] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	CRSP70; CRSP7; MED26	CRSP70; CRSP7; MED26
Homo sapiens	RefSeq	XM_499334.2	ILMN_41133	LOC441261	XM_499334.2	XM_499334.2		441261	89025225	XM_499334.2	LOC441261	XP_499334.2	ILMN_1662397	0004290113	S	1	TTTTAGTATTAACAACTTTGACCAGGAAAAACAAACCCTGCTTTTCCTTT	7	-	76440297-76440346	7q11.23f	PREDICTED: Homo sapiens similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) (LOC441261), mRNA.					
Homo sapiens	RefSeq	XM_936675.1	ILMN_306793	ZNF479	NM_033273.1	NM_033273.1		90827	149274616	NM_033273.1	ZNF479	NP_150376.1	ILMN_1652969	0002470121	A	336	CTATAGAATTCTCTCTGGAGGAATGGCAATGCCTGGATTGTGCTCAGCGG	7	-	57207443-57207492	7p11.2a	Homo sapiens zinc finger protein 479 (ZNF479), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KR19	
Homo sapiens	RefSeq	XR_038192.1	ILMN_341805	LOC727896	XR_038192.1	XR_038192.1		727896	169212867	XR_038192.1	LOC727896		ILMN_3207406	0004780220	A	919	CGACACAGCAGATTGAGTGGGAGATGGGAGGAAGGCTATTACGTATTTCA				18p11.31e	PREDICTED: Homo sapiens misc_RNA (LOC727896), miscRNA.					
Homo sapiens	RefSeq	NM_178812.2	ILMN_8610	MTDH	NM_178812.2	NM_178812.2		92140	31343604	NM_178812.2	MTDH	NP_848927.1	ILMN_1810838	0003850154	S	3409	GTGGCGCCAAGAACGAACCTGTTTAACAGCTGTAACCAATGGTACTGATC	8	+	98807406-98807455	8q22.1e	Homo sapiens metadherin (MTDH), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18316612] [evidence IPI]	AEG-1; 3D3; AEG1; LYRIC	AEG-1; 3D3; AEG1; LYRIC
Homo sapiens	RefSeq	NM_022071.2	ILMN_8099	SH2D4A	NM_022071.2	NM_022071.2		63898	21361890	NM_022071.2	SH2D4A	NP_071354.2	ILMN_1679322	0002680372	S	2745	ACCAGCAGAAGCCAGCAGAGAGGCATGGGACAGGTTCCCCACAAGCCTTA	8	+	19252352-19252401	8p21.3c	Homo sapiens SH2 domain containing 4A (SH2D4A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	SH2A; FLJ20967	FLJ20967; SH2A
Homo sapiens	RefSeq	NM_003399.4	ILMN_7609	XPNPEP2	NM_003399.5	NM_003399.5		7512	93141225	NM_003399.5	XPNPEP2	NP_003390.4	ILMN_1743357	0004780544	S	3172	CAGCAACATGCAGAGTCCCTGAGCCCACCTCCCAGCCCTCTCCTCATTCT	X	+	128731045-128731094	Xq25h	Homo sapiens X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound (XPNPEP2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 9375790] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_025129.3	ILMN_24173	FUZ	NM_025129.3	NM_025129.3		80199	34147614	NM_025129.3	FUZ	NP_079405.2	ILMN_1748836	0005900414	S	1316	GAAGCCTGGCCACCCACACTCTGCATGCCCTCACCCCACTTCTTTGACTA	19	-	55002216-55002219:55002220-55002265	19q13.33b	Homo sapiens fuzzy homolog (Drosophila) (FUZ), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]			FLJ22688; FY	FY; FLJ22688
Homo sapiens	RefSeq	NM_012473.3	ILMN_12228	TXN2	NM_012473.3	NM_012473.3		25828	27436899	NM_012473.3	TXN2	NP_036605.2	ILMN_1654457	0005290332	S	1176	AGGGGGTGCAGAAAATGATTGATGGGCTGGGGAACCCTGGAGAGCCTCGA	22	-	36863203-36863252	22q12.3d	Homo sapiens thioredoxin 2 (TXN2), nuclear gene encoding mitochondrial protein, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol [goid 6662] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]	TRX2; MTRX; MT-TRX	MTRX; TRX2; MT-TRX
Homo sapiens	RefSeq	NM_018474.2	ILMN_6798	NCRNA00153	NM_018474.3	NM_018474.3		55857	118150653	NM_018474.3	NCRNA00153	NP_060944.3	ILMN_1779536	0001300142	S	2058	CAGTAACTCAGAAATTGAGGCTGCTTTACGCCCCAGAAACCATAACACCG	20	+	21175140-21175189	20p11.23a	Homo sapiens non-protein coding RNA 153 (NCRNA00153), mRNA.				MGC102941; MGC141930; DKFZP586H021; HT013	MGC102941; DKFZP586H021; HT013
Homo sapiens	RefSeq	NM_001031689.1	ILMN_14096	PLAA	NM_001031689.1	NM_001031689.1		9373	72534669	NM_001031689.1	PLAA	NP_001026859.1	ILMN_1810387	0005090411	A	2465	ATGCTGTAGATTTATCCTAAATTTGCTGTAGCAGTGGGGAAGAGGGACGG	9	-	26895477-26895508:26895509-26895526	9p21.2a	Homo sapiens phospholipase A2-activating protein (PLAA), transcript variant 1, mRNA.		The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [pmid 9931468] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9931468] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Increases the activity of the enzyme phospholipase A2 [goid 16005] [pmid 9931468] [evidence TAS]	FLJ11281; PLA2P; PLAP; FLJ12699	FLJ11281; PLA2P; PLAP; FLJ12699
Homo sapiens	RefSeq	NM_001031689.1	ILMN_14096	PLAA	NM_001031689.1	NM_001031689.1		9373	72534669	NM_001031689.1	PLAA	NP_001026859.1	ILMN_1769822	0004890470	I	175	GCCTGGTGTGCTGCGCCTATCCGCCGGGAGCCTTTGTGTCCGTGTCCCGA	9	-	26936914-26936963	9p21.2a	Homo sapiens phospholipase A2-activating protein (PLAA), transcript variant 1, mRNA.		The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [pmid 9931468] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9931468] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Increases the activity of the enzyme phospholipase A2 [goid 16005] [pmid 9931468] [evidence TAS]	FLJ11281; PLA2P; PLAP; FLJ12699	FLJ11281; PLA2P; PLAP; FLJ12699
Homo sapiens	RefSeq	NM_019112.2	ILMN_13614	ABCA7	NM_019112.3	NM_019112.3		10347	150417983	NM_019112.3	ABCA7	NP_061985.2	ILMN_1743205	0002570100	A	6473	ACGGCGTGGAGGACTTTTCCGTGAGCCAGACGATGCTGGAGGAGGTATTC	19	+	1016127-1016170:1016269-1016274	19p13.3i	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 7 (ABCA7), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10873640] [evidence TAS]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 10873640] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10873640] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10873640] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	ABCA-SSN; ABCX; FLJ40025	ABCX; ABCA-SSN
Homo sapiens	RefSeq	NM_019112.2	ILMN_13614	ABCA7	NM_019112.3	NM_019112.3		10347	150417983	NM_019112.3	ABCA7	NP_061985.2	ILMN_1729894	0001710193	I	435	CTGGCTCCAGGGTCTCATCTGTAATGTGAACAACACCTGCTTTCCGCAGC	19	+	992873-992922	19p13.3i	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 7 (ABCA7), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10873640] [evidence TAS]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 10873640] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10873640] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10873640] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	ABCA-SSN; ABCX; FLJ40025	ABCX; ABCA-SSN
Homo sapiens	RefSeq	NM_183001.3	ILMN_8375	SHC1	NM_183001.3	NM_183001.3		6464	52693920	NM_183001.3	SHC1	NP_892113.3	ILMN_1701967	0004590280	I	157	GATAGTCCCACTACCCTGTGCTCCTTCTTCCCCCGGATGAGCAACCTGAG	1	-	153209420-153209469	1q21.3e	Homo sapiens SHC (Src homology 2 domain containing) transforming protein 1 (SHC1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9690470] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9544989] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8810325] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7739560] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14665640] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8493579] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14676841] [evidence IDA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence ISS]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 14676841] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 1623525] [evidence TAS]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [pmid 1623525] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 14676841] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [pmid 14676841] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The binding activity of a molecule that brings together a transmembrane receptor protein kinase and one or more other molecules, permitting them to function in a coordinated way [goid 5068] [pmid 14676841] [evidence TAS]; Interacting selectively with the insulin receptor [goid 5158] [pmid 7559478] [evidence IPI]; Interacting selectively with the insulin receptor [goid 5158] [pmid 7537849] [evidence IPI]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [pmid 7541045] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8491186] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 14676841] [evidence TAS]	p66; SHC; p66SHC; SHCA; FLJ26504; p52SHC	p66; SHC; p66SHC; SHCA; FLJ26504; p52SHC
Homo sapiens	RefSeq	NM_138926.1	ILMN_12440	SON	NM_138926.1	NM_138926.1		6651	21040321	NM_138926.1	SON	NP_620304.1	ILMN_1685327	0002370368	I	6949	AGCTGTCTTCTTGCCCCGGTCAGTGCCAGCCGTACTATTCACAACACTGC	21	+	33866741-33866790	21q22.11c	Homo sapiens SON DNA binding protein (SON), transcript variant c, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10509013] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8031013] [evidence TAS]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ21099; SON3; KIAA1019; BASS1; C21orf50; NREBP; DBP-5	FLJ21099; SON3; KIAA1019; BASS1; C21orf50; NREBP; DBP-5
Homo sapiens	RefSeq	NM_001005474.1	ILMN_16362	NFKBIZ	NM_001005474.1	NM_001005474.1		64332	53832023	NM_001005474.1	NFKBIZ	NP_001005474.1	ILMN_1719695	0002470348	A	3450	TTGCTTGCCGCTGGCATGCCTGAGGAATGTATTTGGCTTTGATTACACAC	3	+	101579549-101579598	3q12.3a	Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta (NFKBIZ), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]		MAIL; INAP; FLJ34463; IKBZ; FLJ30225	MAIL; INAP; FLJ34463; IKBZ; FLJ30225
Homo sapiens	RefSeq	NM_000186.2	ILMN_181086	CFH	NM_000186.2	NM_000186.2		3075	62739185	NM_000186.2	CFH	NP_000177.2	ILMN_1698144	0001470743	I	3183	GGAGCCAGTAATGTAACATGCATTAATAGCAGATGGACAGGAAGGCCAAC	1	+	194977747-194977796	1q31.3c	Homo sapiens complement factor H (CFH), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9312129] [evidence TAS]	Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]		HUS; MGC88246; HF1; FH; ARMD4; ARMS1; HF; CFHL3; FHL1; HF2	HUS; MGC88246; HF1; FH; CFHL3; HF; FHL1; HF2
Homo sapiens	RefSeq	XM_209178.5	ILMN_43277	LOC285176	XM_937850.2	XM_937850.2		285176	113414253	XM_937850.2	LOC285176	XP_942943.2	ILMN_1695261	0002480711	A	158	TTCACATTGGCCAAGTTATCATGTCCATCCGCACCAAGCTGCAGAACAAG				2q35a	PREDICTED: Homo sapiens similar to ribosomal protein L10 (LOC285176), mRNA.					
Homo sapiens	RefSeq	NM_001462.3	ILMN_16926	FPR2	NM_001462.3	NM_001462.3		2358	54112386	NM_001462.3	FPR2	NP_001453.1	ILMN_2392569	0003400392	A	904	GGTTTCCCTTTCAACTGGTTGCCCTTCTGGGCACCGTCTGGCTCAAAGAG	19	+	52272672-52272721	19q13.33e	Homo sapiens formyl peptide receptor 2 (FPR2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9054386] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9054386] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 1374236] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 9054386] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9054386] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9054386] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9054386] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an N-formyl peptide to initiate a change in cell activity [goid 4982] [pmid 1374236] [evidence TAS]	FMLPX; FPRH2; LXA4R; FPRH1; FMLP-R-II; FPR2A; HM63; ALXR	FMLPX; FPRH2; LXA4R; FPRH1; FMLP-R-II; FPR2A; HM63; ALXR
Homo sapiens	RefSeq	NM_030973.2	ILMN_19531	MED25	NM_030973.2	NM_030973.2		81857	50428939	NM_030973.2	MED25	NP_112235.2	ILMN_1811823	0001500470	S	2163	TGGCCCGCACAACTTCCCCCTCGGGCTCCACTGCCAGGTCAGATGCTGCT	19	+	50339627-50339663:50340104-50340116	19q13.33b	Homo sapiens mediator complex subunit 25 (MED25), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		TCBAP0758; ACID1; MGC70671; ARC92; DKFZp434K0512; P78	TCBAP0758; ACID1; MGC70671; ARC92; DKFZp434K0512; P78
Homo sapiens	RefSeq	NM_001477.1	ILMN_4743	GAGE12I	NM_001477.1	NM_001477.1		26748	4503888	NM_001477.1	GAGE12I	NP_001468.1	ILMN_2233576	0004830561	S	1	TGGTTCCTGCCGTCCGGACTCTTTTTCCTCTACTGAGATTCATCTGTGTG	X	+	49103621-49103666:49104707-49104710	Xp11.23b	Homo sapiens G antigen 12I (GAGE12I), mRNA.				GAGE7B; CT4.7; AL4	GAGE7B; CT4.7; AL4
Homo sapiens	RefSeq	XM_934178.1	ILMN_4743	GAGE12I	NM_001477.1	NM_001477.1		26748	4503888	NM_001477.1	GAGE12I	NP_001468.1	ILMN_1691563	0004900021	A	392	AGCAATCACAGTGTTAAAAGAAGGCACGTTGAAATGATGCAGGCTGCTCC	X	+	49110777-49110793:49110794-49110826	Xp11.23b	Homo sapiens G antigen 12I (GAGE12I), mRNA.				GAGE7B; CT4.7; AL4	
Homo sapiens	RefSeq	NM_153379.1	ILMN_41914	KREMEN1	NM_001039571.1	NM_001039571.1		83999	89191857	NM_001039571.1	KREMEN1	NP_001034660.1	ILMN_1700994	0005310445	I	1681	AGTGAGGCTGAGATGACAGAGGTGGTCATGGCTGGCACAGGGCTCAGGTA	22	+	27868391-27868440	22q12.1c	Homo sapiens kringle containing transmembrane protein 1 (KREMEN1), transcript variant 4, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11267660] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [pmid 11267660] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KREMEN; FLJ31863; KRM1; KREMEM1	KREMEN; FLJ31863; KRM1
Homo sapiens	RefSeq	NM_153379.1	ILMN_41914	KREMEN1	NM_001039571.1	NM_001039571.1		83999	89191857	NM_001039571.1	KREMEN1	NP_001034660.1	ILMN_1772697	0003390301	A	1268	CCAGGGACTTCGGGGGAAATCTGGAGCATTTTTTACAAGCCTTCCACTTC	22	+	27867978-27868027	22q12.1c	Homo sapiens kringle containing transmembrane protein 1 (KREMEN1), transcript variant 4, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11267660] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [pmid 11267660] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KREMEN; FLJ31863; KRM1; KREMEM1	KREMEN; FLJ31863; KRM1
Homo sapiens	RefSeq	XR_001005.1	ILMN_4665	DUSP5P	NR_002834.1	NR_002834.1		574029	84872125	NR_002834.1	DUSP5P		ILMN_1751093	0004810605	I	194	GATCAATGGAAAGCAGAGCTGCACTGCGGTTAGGGCCTAGTTCCATCAGC	1	+	226852504-226852553	1q42.13c	Homo sapiens dual specificity phosphatase 5 pseudogene (DUSP5P), non-coding RNA.				FLJ34941	
Homo sapiens	RefSeq	NR_002834.1	ILMN_4665	DUSP5P	NR_002834.1	NR_002834.1		574029	84872125	NR_002834.1	DUSP5P		ILMN_2051731	0002100373	S	2242	CCAGGTGCCAGGAGGAAAAGGGTACTTGCTGTGTATCCTGGGTCAGTAAT	1	+	226854552-226854601	1q42.13c	Homo sapiens dual specificity phosphatase 5 pseudogene (DUSP5P), non-coding RNA.				FLJ34941	FLJ34941
Homo sapiens	RefSeq	XM_937107.1	ILMN_32589	LOC648057	XM_937107.1	XM_937107.1		648057	89034715	XM_937107.1	LOC648057	XP_942200.1	ILMN_1720249	0004210255	S	80	ATGGGTTTAATGGAGAGGGCACTGAAGAGGACCTGCAGGCTGCAAGGAGC					PREDICTED: Homo sapiens similar to Guanine nucleotide-binding protein G(s), alpha subunit (Adenylate cyclase-stimulating G alpha protein) (G-alpha-8) (LOC648057), mRNA.					
Homo sapiens	RefSeq	XM_926912.1	ILMN_40403	LOC643605	XM_926912.1	XM_926912.1		643605	89059930	XM_926912.1	LOC643605	XP_932005.1	ILMN_1673608	0002260689	S	1	ATGCAGCCAGATTGCTCCTTTAAGTGGGTCCCTGATCTCATTCCTCCTGA	X	-	99294421-99294470	Xq22.1b	PREDICTED: Homo sapiens similar to CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 (LOC643605), mRNA.					
Homo sapiens	Unigene	Hs.561307	ILMN_114780	HS.561307	Hs.561307		Hs.561307		5514133	AI860517			ILMN_1885233	0002190682	S	112	ATTCAATACAAAATGAACTTGTTCTTCCCAAGTTGCTCTCCACATGCCCC					wl03f11.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2423853 3, mRNA sequence					
Homo sapiens	RefSeq	NR_030634.1	ILMN_388195	MIR938	NR_030634.1	NR_030634.1		100126327	262206230	NR_030634.1	MIR938		ILMN_3310098	0004560358	S	1	AAGGTGTACCATGTGCCCTTAAAGGTGAACCCAGTGCACCTTCATGAACC				10p11.23b	Homo sapiens microRNA 938 (MIR938), microRNA.					
Homo sapiens	RefSeq	NM_181890.1	ILMN_6282	UBE2D3	NM_181890.1	NM_181890.1		7323	33149317	NM_181890.1	UBE2D3	NP_871619.1	ILMN_2320853	0001570458	A	615	TGCTATGTGATCCAAACCCAGATGACCCCCTAGTGCCAGAGATTGCACGG	4	-	103939698-103939747	4q24b	Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (UBE2D3), transcript variant 6, mRNA.		The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8530467] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 8090726] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	E2(17)KB3; MGC43926; UBCH5C; MGC5416; UBC4/5	UBCH5C; E2(17)KB3; MGC43926; MGC5416; UBC4/5
Homo sapiens	RefSeq	NM_181890.1	ILMN_6282	UBE2D3	NM_181890.1	NM_181890.1		7323	33149317	NM_181890.1	UBE2D3	NP_871619.1	ILMN_2320850	0003460148	A	1810	CTGGCAGCCCTAGAGTTCATAGATGGACTTTTGGGACCCAGCAGTTTTGA	4	-	103936529-103936578	4q24b	Homo sapiens ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (UBE2D3), transcript variant 6, mRNA.		The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8530467] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 8090726] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	E2(17)KB3; MGC43926; UBCH5C; MGC5416; UBC4/5	UBCH5C; E2(17)KB3; MGC43926; MGC5416; UBC4/5
Homo sapiens	RefSeq	NM_024831.5	ILMN_8359	NCOA6IP	NM_024831.5	NM_024831.5		96764	19923660	NM_024831.5	NCOA6IP	NP_079107.5	ILMN_1651506	0002100279	S	3526	GGAATTACAGGCGTGAGCTACTGTGCCCAGCCTTACGGACATCCTTTTGA	8	+	56900303-56900352	8q12.1a	Homo sapiens nuclear receptor coactivator 6 interacting protein (NCOA6IP), mRNA.				PIMT; FLJ22995; PIPMT	PIMT; FLJ22995; PIPMT
Homo sapiens	RefSeq	NM_024719.2	ILMN_24814	GRTP1	NM_024719.2	NM_024719.2		79774	118722350	NM_024719.2	GRTP1	NP_078995.2	ILMN_2142353	0000360706	S	1027	TTCAGAACCTGGAAGCTTATCCATGGCCACCGTCGCCAAGCTCCGCGAGA	13	-	113978834-113978883	13q34d	Homo sapiens growth hormone regulated TBC protein 1 (GRTP1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	TBC1D6; MGC138328; MGC138330; FLJ22474	TBC1D6; MGC138328; MGC138330; FLJ22474
Homo sapiens	RefSeq	NM_003297.1	ILMN_8477	NR2C1	NM_003297.1	NM_003297.1		7181	4507672	NM_003297.1	NR2C1	NP_003288.1	ILMN_1728983	0000270544	I	1906	TGCCAGAACACAAGACACCAAATTGAACTCACTGCTTTTGAGGCATCTGG	12	-	93940049-93940098	12q22d	Homo sapiens nuclear receptor subfamily 2, group C, member 1 (NR2C1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [pmid 2597158] [evidence TAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TR2-11; TR2	TR2-11; TR2
Homo sapiens	RefSeq	NM_001032287.1	ILMN_8477	NR2C1	NM_003297.1	NM_003297.1		7181	4507672	NM_003297.1	NR2C1	NP_003288.1	ILMN_1774382	0004180725	A	1141	CCGAAAAAGAGGGGCCACTTCTCAGCGATTCACATGTAGCTTTCAGGCTC	12	-	93958502-93958504:93966975-93967021	12q22d	Homo sapiens nuclear receptor subfamily 2, group C, member 1 (NR2C1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [pmid 2597158] [evidence TAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TR2-11; TR2	TR2-11; TR2
Homo sapiens	RefSeq	XM_941319.1	ILMN_36207	UNQ6975	XM_941319.1	XM_941319.1		400952	88955063	XM_941319.1	UNQ6975	XP_946412.1	ILMN_1787555	0005130598	A	893	TAGAGGGCCAACCATACTGAGTCCTGACTTCACCCATTCCTTCTACCCCC					PREDICTED: Homo sapiens NGNL6975 (UNQ6975), mRNA.					
Homo sapiens	RefSeq	NM_000312.1	ILMN_20582	PROC	NM_000312.1	NM_000312.1		5624	4506114	NM_000312.1	PROC	NP_000303.1	ILMN_1687721	0004810039	S	1442	ATCAGAGACAAGGAAGCCCCCCAGAAGAGCTGGGCACCTTAGCGACCCTC	2	+	127902975-127902992:127902993-127903024	2q14.3d	Homo sapiens protein C (inactivator of coagulation factors Va and VIIIa) (PROC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2538457] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12052963] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of blood coagulation [goid 30195] [pmid 15005336] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 12563316] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 15005336] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15248212] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	protein C; PROC1	protein C; PROC1
Homo sapiens	Unigene	Hs.99298	ILMN_74606	HS.99298	Hs.99298		Hs.99298		23521968	BU676723			ILMN_1848328	0001340142	S	328	GATGTAATGGCATTCCACAGAAAGACCTAAACCACAGTTTCAGCTCTATC	12	+	121522409-121522458		UI-CF-DU1-aam-a-24-0-UI.s1 UI-CF-DU1 Homo sapiens cDNA clone UI-CF-DU1-aam-a-24-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001713850.1	ILMN_346843	LOC730268	XM_001713850.1	XM_001713850.1		730268	169164060	XM_001713850.1	LOC730268	XP_001713902.1	ILMN_3227026	0004150112	A	447	AGGGAAGTCTGTGCTCTCATCAGATGTTCCTTCAGGTACAGAAACTGAGG				2p11.2d	PREDICTED: Homo sapiens similar to anaphase promoting complex subunit 1 (LOC730268), mRNA.					
Homo sapiens	RefSeq	NR_002147.2	ILMN_7173	MYH16	NR_002147.2	NR_002147.2		84176	70608212	NR_002147.2	MYH16		ILMN_2233334	0003290280	S	1913	AGGAGTTGCAGGTGGAAGTGGACAGCTCGCAGAAGGAGTGCCGCATGTAC	7	+	98732339-98732388	7q22.1a-q22.1b	Homo sapiens myosin, heavy chain 16 pseudogene (MYH16), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	MHC20; MYH5; MYH16P; FLJ22037	MHC20; MYH5; MYH16P; FLJ22037
Homo sapiens	RefSeq	NR_002147.2	ILMN_7173	MYH16	NR_002147.2	NR_002147.2		84176	70608212	NR_002147.2	MYH16		ILMN_2233339	0004200768	S	1592	AGTCAGAGCTGCAGCGCCTCGTGTCCAAACTCAACACTGAGGTCACCACC	7	+	98727959-98728008	7q22.1a-q22.1b	Homo sapiens myosin, heavy chain 16 pseudogene (MYH16), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]	MHC20; MYH5; MYH16P; FLJ22037	MHC20; MYH5; MYH16P; FLJ22037
Homo sapiens	RefSeq	XM_115100.4	ILMN_31220	LOC652436	XM_941879.1	XM_941879.1		652436	89034680	XM_941879.1	LOC652436	XP_946972.1	ILMN_1684567	0002600608	S	61	GAGTCAGACAAAGGAATGGTGGCCTTCTTCTGCTGCTCCTGGGAGCTTTG					PREDICTED: Homo sapiens similar to tripartite motif protein 39 (LOC652436), mRNA.					
Homo sapiens	RefSeq	NM_030761.3	ILMN_22408	WNT4	NM_030761.3	NM_030761.3		54361	45439371	NM_030761.3	WNT4	NP_110388.2	ILMN_1666392	0006840202	S	1265	CCTGCGCCGGCAACCACCTAGTGGCCCAGGGAAGGCCGATAATTTAAACA	1	-	22319066-22319115	1p36.12a	Homo sapiens wingless-type MMTV integration site family, member 4 (WNT4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IEA]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IEA]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40037] [evidence IEA]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 48599] [evidence IEA]; The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48856] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	WNT-4	WNT-4
Homo sapiens	RefSeq	NM_006738.4	ILMN_15975	AKAP13	NM_006738.4	NM_006738.4		11214	31563329	NM_006738.4	AKAP13	NP_006729.4	ILMN_1752247	0002060341	I	4922	CTGGTGCCCCTCTGGTGTGCAGTACTCTGCTGGCCTGAGTGCTGACTTTA	15	+	84006629-84006678	15q25.3a-q25.3b	Homo sapiens A kinase (PRKA) anchor protein 13 (AKAP13), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9891067] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [pmid 1618839] [evidence NAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8290273] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16301118] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HA-3; FLJ11952; BRX; FLJ43341; c-lbc; PROTO-LB; Ht31; LBC; AKAP-Lbc; PROTO-LBC	HA-3; FLJ11952; BRX; FLJ43341; c-lbc; PROTO-LB; Ht31; LBC; AKAP-Lbc; PROTO-LBC
Homo sapiens	RefSeq	NM_133431.1	ILMN_173102	XAGE1	NM_133431.1	NM_133431.1		9503	19747280	NM_133431.1	XAGE1	NP_597674.1	ILMN_2258977	0003190129	I	139	GCAGGCTTCCGGAGGGTTGTGTGGTCAGTGACTCAGAGTGAGAAGGCCCT	X	-	52549676-52549725	Xp11.22b	Homo sapiens X antigen family, member 1 (XAGE1), transcript variant 2, mRNA.				XAGE-1; GAGED2	XAGE-1; GAGED2
Homo sapiens	RefSeq	NM_133431.1	ILMN_173102	XAGE1	NM_133431.1	NM_133431.1		9503	19747280	NM_133431.1	XAGE1	NP_597674.1	ILMN_2343774	0004490743	A	2	GGAACGCGGCGGAGCTGTGAGCCGGCGACTCGGGTCCCTGAGGTCTGGAT	X	-	52549813-52549862	Xp11.22b	Homo sapiens X antigen family, member 1 (XAGE1), transcript variant 2, mRNA.				XAGE-1; GAGED2	XAGE-1; GAGED2
Homo sapiens	RefSeq	NM_133431.1	ILMN_173102	XAGE1	NM_133431.1	NM_133431.1		9503	19747280	NM_133431.1	XAGE1	NP_597674.1	ILMN_2343765	0002630484	A	732	ATATTTGACTTAAACTATCTCAATAAAGTTTTGCAGCTTTCACCAAAAAA				Xp11.22b	Homo sapiens X antigen family, member 1 (XAGE1), transcript variant 2, mRNA.				XAGE-1; GAGED2	XAGE-1; GAGED2
Homo sapiens	RefSeq	NM_133431.1	ILMN_173102	XAGE1	NM_133431.1	NM_133431.1		9503	19747280	NM_133431.1	XAGE1	NP_597674.1	ILMN_2258982	0005570689	I	81	AGGTCCACAGGCAGATCCAACTGGGAGTTGAAGTGTGAGTGAGAGTGAAG	X	-	52549734-52549783	Xp11.22b	Homo sapiens X antigen family, member 1 (XAGE1), transcript variant 2, mRNA.				XAGE-1; GAGED2	XAGE-1; GAGED2
Homo sapiens	RefSeq	NM_133468.2	ILMN_21920	BMPER	NM_133468.2	NM_133468.2		168667	38327519	NM_133468.2	BMPER	NP_597725.1	ILMN_1702371	0004780082	S	4794	GCCATCTCTGATGGGAGAGGGTGAGGAAATCAGCTGAATGGTTGGCCTGC	7	+	34161772-34161821	7p14.3b	Homo sapiens BMP binding endothelial regulator (BMPER), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CV-2; CV2; CRIM3	CV-2; CV2; CRIM3
Homo sapiens	RefSeq	XM_946047.1	ILMN_162123	PSMD12	XM_001134072.1	XM_001134072.1		5718	113427541	XM_001134072.1	PSMD12	XP_001134072.1	ILMN_1691428	0004120047	I	2849	TGCAGTGGATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCATCTAAG				17q24.2b	PREDICTED: Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 (PSMD12), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [pmid 9426256] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_014810.2	ILMN_19424	CEP350	NM_014810.3	NM_014810.3		9857	109148532	NM_014810.3	CEP350	NP_055625.3	ILMN_1742400	0005340553	S	11532	GGGTCTCGGGAAATGCTCAGATTGATGTCTTACCAGCATTTCTTCTGGGC	1	+	178348717-178348766	1q25.2c	Homo sapiens centrosomal protein 350kDa (CEP350), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]			KIAA0480; CAP350; gm133; FLJ44058; FLJ38282; RP11-502H18.1	KIAA0480; CAP350; gm133; RP11-502H18.1
Homo sapiens	RefSeq	NM_012450.2	ILMN_17218	SLC13A4	NM_012450.2	NM_012450.2		26266	31795545	NM_012450.2	SLC13A4	NP_036582.2	ILMN_1663723	0006450736	S	2634	GGCAAAGAAAACCACTAGGACCACCAGGAGCACACAACCCCAGACCCACG	7	-	135366197-135366246	7q33c	Homo sapiens solute carrier family 13 (sodium/sulfate symporters), member 4 (SLC13A4), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10535998] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [pmid 10535998] [evidence TAS]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + Na+(out) = sulfate(in) + Na+(in) [goid 15382] [pmid 10535998] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SUT1; SUT-1	SUT1; SUT-1
Homo sapiens	RefSeq	XM_926352.1	ILMN_172560	FAM163B	NM_001080515.1	NM_001080515.1		642968	122937467	NM_001080515.1	FAM163B	NP_001073984.1	ILMN_1762843	0001110661	S	364	CTCTACAAGAGCGTGAGCCAGGAGGACGTGGAGCTGCCCCCGGGGGGCTT	9	-	136444231-136444280	9q34.2a	Homo sapiens family with sequence similarity 163, member B (FAM163B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_001080515.1	ILMN_172560	FAM163B	NM_001080515.1	NM_001080515.1		642968	122937467	NM_001080515.1	FAM163B	NP_001073984.1	ILMN_2093072	0005860653	S	365	TCTACAAGAGCGTGAGCCAGGAGGACGTGGAGCTGCCCCCGGGGGGCTTC	9	-	136444230-136444279	9q34.2a	Homo sapiens family with sequence similarity 163, member B (FAM163B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.540433	ILMN_105144	HS.540433	Hs.540433		Hs.540433		31448696	CD516978			ILMN_1910817	0003520296	S	2	GATGGAAACAGGGCTTTTGGCTGCCTGTGAGGAAGGGAATGGGGTGGGCA					AGENCOURT_14368041 NIH_MGC_181 Homo sapiens cDNA clone IMAGE:30408004 5, mRNA sequence					
Homo sapiens	RefSeq	NM_152430.2	ILMN_11153	OR51E1	NM_152430.2	NM_152430.2		143503	56118308	NM_152430.2	OR51E1	NP_689643.1	ILMN_1750330	0007210286	S	1130	GGCCACACACGCTTCAGAGCCCTAGGTGTCAGTGATCAAACTTCTTTTCC	11	+	4631265-4631289:4631290-4631314	11p15.4d	Homo sapiens olfactory receptor, family 51, subfamily E, member 1 (OR51E1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	MGC24137; OR51E1P; POGR; D-GPCR; PSGR2; OR52A3P; GPR164	MGC24137; OR51E1P; POGR; D-GPCR; PSGR2; OR52A3P; GPR164
Homo sapiens	RefSeq	NM_020912.1	ILMN_18604	FLYWCH1	NM_020912.1	NM_020912.1		84256	62953135	NM_020912.1	FLYWCH1	NP_065963.1	ILMN_1656792	0001450445	A	2380	CTCCCCACCACGGCCCAGCAGGAGGACCCAGAAAAGATTCAAGTTCAGCT	16	+	2928428-2928458:2930034-2930052	16p13.3d	Homo sapiens FLYWCH-type zinc finger 1 (FLYWCH1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_006039.2	ILMN_20561	MRC2	NM_006039.3	NM_006039.3		9902	110624773	NM_006039.3	MRC2	NP_006030.2	ILMN_1783946	0004050593	S	4765	AGCAGCTCCAGCCCCACCGAGGCCACTGAGAAGAACATCCTGGTGTCAGA	17	+	58123467-58123516	17q23.2d	Homo sapiens mannose receptor, C type 2 (MRC2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	ENDO180; KIAA0709; CD280; FLJ35911; UPARAP; CLEC13E	ENDO180; KIAA0709; CD280; UPARAP; CLEC13E
Homo sapiens	RefSeq	XM_939672.1	ILMN_30901	LOC130678	XM_939672.1	XM_939672.1		130678	88954903	XM_939672.1	LOC130678	XP_944765.1	ILMN_1724247	0007330707	A	53	GGAATCCCCAGGATGACATGGAGAGCAACCAGTCCAGATTCACCGTGTTC				2p24.3b	PREDICTED: Homo sapiens similar to 60S acidic ribosomal protein P1 (LOC130678), mRNA.					
Homo sapiens	RefSeq	NM_003000.1	ILMN_12116	SDHB	NM_003000.2	NM_003000.2		6390	115387093	NM_003000.2	SDHB	NP_002991.2	ILMN_1667257	0003370195	S	841	CCTGGCCAAGCTGCAGGACCCATTCTCTCTATACCGCTGCCACACCATCA	1	-	17349128-17349177	1p36.13e	Homo sapiens succinate dehydrogenase complex, subunit B, iron sulfur (Ip) (SDHB), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 2302193] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 16143825] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [pmid 2302193] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: succinate + quinone = fumarate + quinol [goid 8177] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]; Interacting selectively with a 3 iron, 4 sulfur (3Fe-4S) cluster; this cluster consists of three iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. It is essentially a 4Fe-4S cluster with one iron missing [goid 51538] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	SDHIP; SDH; SDH1; PGL4; IP	SDHIP; SDH; SDH1; PGL4; IP
Homo sapiens	RefSeq	XM_932569.1	ILMN_44622	LOC644992	XM_944824.1	XM_944824.1		644992	89034590	XM_944824.1	LOC644992	XP_949917.1	ILMN_1665294	0006180630	S	181	AATGGAGAGAAGGTACTCAAAGGGAAAAAGGGAAAAGCTGATGCTGGCAA				11p15.2c	PREDICTED: Homo sapiens hypothetical LOC644992 (LOC644992), mRNA.					
Homo sapiens	RefSeq	XR_037233.1	ILMN_349332	LOC441484	XR_037233.1	XR_037233.1		441484	169216193	XR_037233.1	LOC441484		ILMN_3215759	0005810519	A	314	GCTTTGGTTGGCAGTGCGGTGGCCCTTGAAACGAAGGATGCCTCACTAAC				Xp22.13a	PREDICTED: Homo sapiens misc_RNA (LOC441484), miscRNA.					
Homo sapiens	RefSeq	XR_037233.1	ILMN_349332	LOC441484	XR_037233.1	XR_037233.1		441484	169216193	XR_037233.1	LOC441484		ILMN_3292274	0001710301	M	585	CCAAAGTCAGTGGAATTCAGATTTGGAATCAAGGCTGCAGAGGGAGCAAC				Xp22.13a	PREDICTED: Homo sapiens misc_RNA (LOC441484), miscRNA.					
Homo sapiens	RefSeq	NM_172078.1	ILMN_19817	CAMK2B	NM_172078.1	NM_172078.1		816	26051205	NM_172078.1	CAMK2B	NP_742075.1	ILMN_2315208	0001710131	A	1671	TGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGG	7	-	44226298-44226347	7p13d	Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II beta (CAMK2B), transcript variant 2, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9060999] [evidence TAS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CAMKB; CAM2; MGC29528; CAMK2	CAMKB; CAM2; MGC29528; CAMK2
Homo sapiens	RefSeq	XM_001720317.1	ILMN_350957	LOC727894	XM_001720317.1	XM_001720317.1		727894	169193210	XM_001720317.1	LOC727894	XP_001720369.1	ILMN_3294149	0003060504	M	23	GTGCCCTGGGGAAGAGATGGTTGGGAAGTCTGAGAGGAAGCAGGAGAGCT				10p15.1e	PREDICTED: Homo sapiens hypothetical LOC727894 (LOC727894), mRNA.					
Homo sapiens	RefSeq	NM_004666.1	ILMN_14011	VNN1	NM_004666.1	NM_004666.1		8876	4759311	NM_004666.1	VNN1	NP_004657.1	ILMN_1674574	0005310754	S	2342	GGCAGCCCTGGCAAATGAATCAAAGACCCATTCCTGTTCCTCTCCCCACC	6	-	133045136-133045185	6q23.2b	Homo sapiens vanin 1 (VNN1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 17145956] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Inflammation which comprises a rapid, short-lived, relatively uniform response to acute injury or antigenic challenge and is characterized by accumulations of fluid, plasma proteins, and granulocytic leukocytes. An acute inflammatory response occurs within a matter of minutes or hours, and either resolves within a few days or becomes a chronic inflammatory response [goid 2526] [pmid 14966568] [evidence ISS]; Inflammation of prolonged duration (weeks or months) in which active inflammation, tissue destruction, and attempts at repair are proceeding simultaneously. Although it may follow acute inflammation, chronic inflammation frequently begins insidiously, as a low-grade, smoldering, often asymptomatic response [goid 2544] [pmid 14966568] [evidence ISS]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 15282320] [evidence ISS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9790769] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 17145956] [evidence TAS]; The chemical reactions and pathways involving pantothenate, the anion of pantothenic acid, the amide of beta-alanine and pantoic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods [goid 15939] [pmid 11491533] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 11491533] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T cell differentiation in the thymus [goid 33089] [pmid 11491533] [evidence ISS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 14966568] [evidence ISS]	Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [evidence IEA]; Interacting selectively with any glycosylphosphatidylinositol anchor. GPI anchors serve to attach membrane proteins to the lipid bilayer of cell membranes [goid 34235] [pmid 17145956] [evidence TAS]	MGC116931; HDLCQ8; MGC116930; Tiff66; MGC116933; MGC116932	MGC116931; HDLCQ8; MGC116930; Tiff66; MGC116933; MGC116932
Homo sapiens	RefSeq	NM_007041.2	ILMN_26196	ATE1	NM_007041.2	NM_007041.2		11101	50345874	NM_007041.2	ATE1	NP_008972.2	ILMN_1756867	0006770243	I	973	GTATCAAGTGGCCATACACCAGGATCCACCCGATGAATGTGGGAAGACTG	10	-	123663356-123663398:123670421-123670427	10q26.13a	Homo sapiens arginyltransferase 1 (ATE1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9858543] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9858543] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The posttranslational conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway [goid 16598] [pmid 9858543] [evidence NAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]; The posttranslational conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway [goid 16598] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Catalysis of the reaction: L-arginyl-tRNA + protein = tRNA + L-arginyl-protein [goid 4057] [pmid 9858543] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: L-arginyl-tRNA + protein = tRNA + L-arginyl-protein [goid 4057] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC26724	MGC26724
Homo sapiens	RefSeq	NM_007041.2	ILMN_26196	ATE1	NM_007041.2	NM_007041.2		11101	50345874	NM_007041.2	ATE1	NP_008972.2	ILMN_1812479	0003520427	A	1648	CCTCTGCCGGGAAGTTCCTGTGTTGTGCTGATGATTTGTGCCAGGATACA	10	-	123652117-123652125:123658356-123658396	10q26.13a	Homo sapiens arginyltransferase 1 (ATE1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9858543] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9858543] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The posttranslational conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway [goid 16598] [pmid 9858543] [evidence NAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]; The posttranslational conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway [goid 16598] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Catalysis of the reaction: L-arginyl-tRNA + protein = tRNA + L-arginyl-protein [goid 4057] [pmid 9858543] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: L-arginyl-tRNA + protein = tRNA + L-arginyl-protein [goid 4057] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC26724	MGC26724
Homo sapiens	RefSeq	NM_007041.2	ILMN_26196	ATE1	NM_007041.2	NM_007041.2		11101	50345874	NM_007041.2	ATE1	NP_008972.2	ILMN_2381769	0004150626	A	1846	CCTAGCCCCCATAATTGGGATTTATCATTTTGGAGGATTCTTTCTAGAGC	10	-	123651919-123651968	10q26.13a	Homo sapiens arginyltransferase 1 (ATE1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9858543] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9858543] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The posttranslational conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway [goid 16598] [pmid 9858543] [evidence NAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]; The posttranslational conjugation of arginine to the N-terminal aspartate or glutamate of a protein; required for the degradation of the protein via the ubiquitin pathway [goid 16598] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]	Catalysis of the reaction: L-arginyl-tRNA + protein = tRNA + L-arginyl-protein [goid 4057] [pmid 9858543] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: L-arginyl-tRNA + protein = tRNA + L-arginyl-protein [goid 4057] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC26724	MGC26724
Homo sapiens	RefSeq	XM_001718858.1	ILMN_344583	LOC728054	XM_001718858.1	XM_001718858.1		728054	169210111	XM_001718858.1	LOC728054	XP_001718910.1	ILMN_3232753	0007320521	I	942	GGAGTGTAGTAGTGCTATCGCAGCTGACTGCAGCCTCAACCTTCCAGGCT	16	+	88757697-88757746	16q24.3b	PREDICTED: Homo sapiens hypothetical LOC728054, transcript variant 2 (LOC728054), mRNA.					
Homo sapiens	RefSeq	XM_943577.1	ILMN_39382	LOC388474	XM_938181.2	XM_938181.2		388474	113427923	XM_938181.2	LOC388474	XP_943274.1	ILMN_1682873	0003400487	A	748	CAACGTCCTGGGTCCTAAGTCTGTGGCTCGTATCGCCAAGCTCGAAAAGG				18q12.2d	PREDICTED: Homo sapiens similar to 60S ribosomal protein L7a, transcript variant 3 (LOC388474), mRNA.					
Homo sapiens	RefSeq	XR_038168.1	ILMN_342750	LOC730993	XR_038168.1	XR_038168.1		730993	169202646	XR_038168.1	LOC730993		ILMN_3224999	0007400670	A	918	AGTGCTGGAGAACCCTGGGTTTGAAAAGCATGGAGCTTCGTGGTGAAGGT				11p15.4d	PREDICTED: Homo sapiens misc_RNA (LOC730993), miscRNA.					
Homo sapiens	RefSeq	XR_038168.1	ILMN_342750	LOC730993	XR_038168.1	XR_038168.1		730993	169202646	XR_038168.1	LOC730993		ILMN_3301585	0007550487	M	162	AGGCTGAGGCGGGCAGATCACCTGACATCAGTTCAAGACCAGCTTGGCCA				11p15.4d	PREDICTED: Homo sapiens misc_RNA (LOC730993), miscRNA.					
Homo sapiens	RefSeq	NM_016231.2	ILMN_26615	NLK	NM_016231.4	NM_016231.4		51701	149408125	NM_016231.4	NLK	NP_057315.3	ILMN_1772814	0006200242	S	3336	TGAGGCTCCTGAGAATCAACCCAACTGAAGCATTTCAATTCACTTGAATG	17	+	23547329-23547378	17q11.2a	Homo sapiens nemo-like kinase (NLK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence ISS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15082531] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp761G1211; FLJ21033	DKFZp761G1211; FLJ21033
Homo sapiens	RefSeq	XM_001716919.1	ILMN_338269	LOC100129335	XM_001716919.1	XM_001716919.1		100129335	169170937	XM_001716919.1	LOC100129335	XP_001716971.1	ILMN_3256748	0000780121	M	97	GCCAAGTCTCTCTTCGGTGCCACCGGCGGGCGAGGCCGGATTAATCACCG	7	+	16533028-16533077	7p21.1c	PREDICTED: Homo sapiens hypothetical protein LOC100129335 (LOC100129335), mRNA.					
Homo sapiens	RefSeq	NM_173176.1	ILMN_24969	PTK2B	NM_173176.1	NM_173176.1		2185	27886589	NM_173176.1	PTK2B	NP_775268.1	ILMN_2330966	0002810632	A	3841	CCAAGCATCAGGGGGAAGAAGCAGAGAGATGCGGCCAAGATAGGACCTTG	8	+	27316269-27316318	8p21.2a	Homo sapiens PTK2B protein tyrosine kinase 2 beta (PTK2B), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7499242] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10867021] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7529876] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10880513] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 8939945] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7499242] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10867021] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [pmid 7529876] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10867021] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 8497321] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10867021] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9020138] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PYK2; FAK2; FRNK; CAKB; RAFTK; FADK2; PTK; CADTK; PKB	PYK2; FAK2; FRNK; CAKB; RAFTK; FADK2; PTK; CADTK; PKB
Homo sapiens	RefSeq	NM_018271.3	ILMN_28363	THNSL2	NM_018271.3	NM_018271.3		55258	149193322	NM_018271.3	THNSL2	NP_060741.3	ILMN_3235974	0006580671	S	1775	TGGTCACCAGGGAGGCTGAGTGAGGGGCTGTGAACAGTTGCCGGAAGCAC	2	+	88266924-88266973	2p11.2d-p11.2c	Homo sapiens threonine synthase-like 2 (S. cerevisiae) (THNSL2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	FLJ10916; TSH2	
Homo sapiens	RefSeq	NM_006249.3	ILMN_3716	PRB3	NM_006249.3	NM_006249.3		5544	41349487	NM_006249.3	PRB3	NP_006240.3	ILMN_1759690	0005260608	S	698	TCGTCCGGGAAAGCCAGAAGGACCACCCCCACAAGGAGGCAACAAACCTC	12	-	11311740-11311789	12p13.2b	Homo sapiens proline-rich protein BstNI subfamily 3 (PRB3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	G1; MGC116864; MGC116862; MGC116863; PRG	G1; MGC116864; MGC116862; MGC116863; PRG
Homo sapiens	RefSeq	NR_029844.1	ILMN_388119	MIR296	NR_029844.1	NR_029844.1		407022	262206120	NR_029844.1	MIR296		ILMN_3309624	0005910360	S	24	TCAATCCTGTTGTGCCTAATTCAGAGGGTTGGGTGGAGGCTCTCCTGAAG					Homo sapiens microRNA 296 (MIR296), microRNA.					
Homo sapiens	RefSeq	NM_017868.3	ILMN_34685	TTC12	NM_017868.3	NM_017868.3		54970	90669930	NM_017868.3	TTC12	NP_060338.3	ILMN_2183784	0001230450	S	2049	GCAGGTCTTGTTAAAGCTTGCAGGCAGTGACACACAGAAGACGGCCGTGC	11	+	112740894-112740943	11q23.1d	Homo sapiens tetratricopeptide repeat domain 12 (TTC12), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ20535; FLJ13859; TPARM	FLJ20535; FLJ13859; TPARM
Homo sapiens	RefSeq	XM_166571.4	ILMN_33888	KIAA0363	XM_166571.5	XM_166571.5		23148	113418510	XM_166571.5	KIAA0363	XP_166571.4	ILMN_1815502	0001820020	I	650	TACGATCAGATCTGTCCTGCGATGCGGCCGCTGCCACCACCATCCTGGGA	7	-	45092195-45092236:45094555-45094562	7p13c	PREDICTED: Homo sapiens KIAA0363 protein, transcript variant 1 (KIAA0363), mRNA.					
Homo sapiens	RefSeq	XM_945371.1	ILMN_174442	LOC732343	XM_001132884.1	XM_001132884.1		732343	113412193	XM_001132884.1	LOC732343	XP_001132884.1	ILMN_1708092	0006330563	S	240	AACCCGGAAAACAGGAGTCCCAAGCTGGGCGCTGAATCCTGCGACGCGAA					PREDICTED: Homo sapiens hypothetical protein LOC732343 (LOC732343), mRNA.					
Homo sapiens	RefSeq	NM_003777.2	ILMN_180698	DNAH11	NM_003777.3	NM_003777.3		8701	114155131	NM_003777.3	DNAH11	NP_003768.2	ILMN_1705244	0007330360	S	13304	TATGGACACCCGCCAAGGGAAGGTGCATACCTCCACGGACTCTTCATGGA	7	+	21730391-21730440	7p15.3d-p15.3c	Homo sapiens dynein, axonemal, heavy chain 11 (DNAH11), mRNA.	A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	Cell motility due to movement of cilia or flagella [goid 1539] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; Cell motility due to movement of cilia or flagella [goid 1539] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence NAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	FLJ37699; DNAHC11; DNHBL; DNAHBL; DPL11; FLJ30095	FLJ37699; DNAHC11; DNHBL; DNAHBL; DPL11; FLJ30095
Homo sapiens	RefSeq	NM_170600.1	ILMN_8703	SH2D3C	NM_170600.1	NM_170600.1		10044	41281820	NM_170600.1	SH2D3C	NP_733745.1	ILMN_1775734	0000270487	I	2741	AGGGTCCTGCGTGGACTCTGGGTTCCATCCCACCTGCTACATGCTCACCA	9	-	129540644-129540693	9q34.11a	Homo sapiens SH2 domain containing 3C (SH2D3C), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 10187783] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 10187783] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NSP3; PRO34088; CHAT; FLJ39664	NSP3; PRO34088; CHAT; FLJ39664
Homo sapiens	RefSeq	NR_001455.1	ILMN_20669	LOC85391	NR_001455.1	NR_001455.1		85391	32526879	NR_001455.1	LOC85391		ILMN_1748563	0006580762	S	31	CCACGCAATGGAGGGGAAGGGGATGGTAAACCAAGCTTGAGCTGGATTTC	11	-	122434089-122434138	11q24.1b	Homo sapiens RNA, small nucleolar (LOC85391) on chromosome 11.					
Homo sapiens	RefSeq	XM_933028.1	ILMN_306708	KGFLP1	NR_003674.1	NR_003674.1		387628	153792231	NR_003674.1	KGFLP1		ILMN_1676520	0006940100	I	470	GGTCTGACTCAGTTCCTGCGGGGAACTTCACCAGTGACCCAGTCAGTGCC	9	+	46528031-46528080	9p11.2a	Homo sapiens keratinocyte growth factor-like protein 1 (KGFLP1), non-coding RNA.			The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC125747; MGC126891; MGC125746	
Homo sapiens	RefSeq	NM_174950.2	ILMN_306708	KGFLP1	NR_003674.1	NR_003674.1		387628	153792231	NR_003674.1	KGFLP1		ILMN_1713823	0000160044	I	1689	TATTTGGGAATATGGCTTTTAATAATGTTCTTCCCACAAATAATCATGCT	9	+	46586399-46586448	9p11.2a	Homo sapiens keratinocyte growth factor-like protein 1 (KGFLP1), non-coding RNA.			The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC125747; MGC126891; MGC125746	MGC126891
Homo sapiens	RefSeq	XM_934721.1	ILMN_42667	LOC645273	XM_944312.2	XM_944312.2		645273	113414257	XM_944312.2	LOC645273	XP_949405.1	ILMN_1692030	0005690722	S	247	CAGCAGAAAACAGAGTTGCCTTCATGTCTTTACTCTCAAGGTTCTGCAGC				2q35c	PREDICTED: Homo sapiens hypothetical LOC645273 (LOC645273), mRNA.					
Homo sapiens	RefSeq	NM_020213.1	ILMN_5118	PARP6	NM_020213.1	NM_020213.1		56965	9910373	NM_020213.1	PARP6	NP_064598.1	ILMN_1771832	0004390360	A	2049	CATGCGTGTGATCGGAACTCAGGTTTACACAAACTGAGGGGGCCCCAGCC	15	-	70320836-70320885	15q23b	Homo sapiens poly (ADP-ribose) polymerase family, member 6 (PARP6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Homo sapiens	RefSeq	NM_014313.2	ILMN_28657	TMEM50A	NM_014313.2	NM_014313.2		23585	20357549	NM_014313.2	TMEM50A	NP_055128.1	ILMN_1745368	0000540193	S	1936	CCCCACCCTACAACTGAGCACAACCTCTTTCCCCACAGTGCAATTCAGAA	1	+	25561095-25561144	1p36.11c	Homo sapiens transmembrane protein 50A (TMEM50A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			SMP1; RP11-335G20.3; IFNRC	SMP1; RP11-335G20.3; IFNRC
Homo sapiens	RefSeq	XM_940758.1	ILMN_309425	HGSNAT	NM_152419.2	NM_152419.2		138050	150378451	NM_152419.2	HGSNAT	NP_689632.2	ILMN_1662413	0006370519	A	1701	CTTCATCCTGCTGGTCCTGTACCCAGTTGTGGATGTGAAGGGGCTGTGGA	8	+	43053022-43053071	8p11.21a	Homo sapiens heparan-alpha-glucosaminide N-acetyltransferase (HGSNAT), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + heparan alpha-D-glucosaminide = CoA + heparan N-acetyl-alpha-D-glucosaminide [goid 15019] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ22242; HGNAT; MPS3C; FLJ32731; TMEM76; DKFZp686G24175	
Homo sapiens	RefSeq	XM_372038.4	ILMN_309425	HGSNAT	NM_152419.2	NM_152419.2		138050	150378451	NM_152419.2	HGSNAT	NP_689632.2	ILMN_1711465	0000990544	I	96	CGTGCTGAGCGCCGCGCTGCTGGCCCCCGGCGGCTCTTCGGGGCGCGATG	8	+	42995687-42995736	8p11.21a	Homo sapiens heparan-alpha-glucosaminide N-acetyltransferase (HGSNAT), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + heparan alpha-D-glucosaminide = CoA + heparan N-acetyl-alpha-D-glucosaminide [goid 15019] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ22242; HGNAT; MPS3C; FLJ32731; TMEM76; DKFZp686G24175	
Homo sapiens	RefSeq	NM_025091.2	ILMN_19690	CXYORF2	NM_025091.2	NM_025091.2		80161	18594499	NM_025091.2	CXYorf2	NP_079367.2	ILMN_1684060	0004610228	S	594	GGAGCTGGTTAGTGATGTCACGCCCGTGCGGTTTGACTCGGGCTGAGAAA	XY	+	1482456-1482478:1491636-1491662	Xp22.33d,Yp11.32a	Homo sapiens chromosome X and Y open reading frame 2 (CXYorf2), mRNA.				FLJ13330	FLJ13330
Homo sapiens	RefSeq	NM_014316.1	ILMN_164906	CARHSP1	NM_001042476.1	NM_001042476.1		23589	109715853	NM_001042476.1	CARHSP1	NP_001035941.1	ILMN_1809477	0001230348	S	961	GGGGTGTTCCCGGCCATCAGCACAGCCTATGACCATTGCAACAACCTCTC	16	-	8948804-8948853	16p13.2b	Homo sapiens calcium regulated heat stable protein 1, 24kDa (CARHSP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9712905] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any phosphatase [goid 19902] [pmid 12801884] [evidence NAS]	CSDC1; MGC111446; CRHSP-24	CSDC1; CRHSP-24
Homo sapiens	RefSeq	NM_178470.3	ILMN_4734	WDR40B	NM_178470.3	NM_178470.3		139170	71284431	NM_178470.3	WDR40B	NP_848565.2	ILMN_1802766	0002140397	S	2216	TGGTCGGAACACTTTAGGAGTGCAGGGGTTCTGCTTCATTGCATTTTCAG	X	-	125512163-125512212	Xq25e	Homo sapiens WD repeat domain 40B (WDR40B), mRNA.				KIAA1892L	KIAA1892L
Homo sapiens	RefSeq	NM_178470.3	ILMN_4734	WDR40B	NM_178470.3	NM_178470.3		139170	71284431	NM_178470.3	WDR40B	NP_848565.2	ILMN_1738885	0002230228	S	2861	GTGGACTGCTATGAAAACAGGTTGTACTTCTCCATATGTGAGACTACTGG	X	-	125511518-125511567	Xq25e	Homo sapiens WD repeat domain 40B (WDR40B), mRNA.				KIAA1892L	KIAA1892L
Homo sapiens	RefSeq	NM_000963.1	ILMN_29986	PTGS2	NM_000963.1	NM_000963.1		5743	4506264	NM_000963.1	PTGS2	NP_000954.1	ILMN_1677511	0002260477	S	3943	GCCTATGTGCTAGCCCACAAAGAATATTGTCTCATTAGCCTGAATGTGCC	1	-	184908064-184908113	1q31.1a	Homo sapiens prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) (PTGS2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14511332] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 4514999] [evidence EXP]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9630216] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence ISS];  [goid 19371] [pmid 14511332] [evidence NAS]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IEA]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [pmid 14511332] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [pmid 14511332] [evidence NAS]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [pmid 4514999] [evidence EXP]; Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [pmid 14511332] [evidence NAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PHS-2; COX-2; hCox-2; COX2; PGHS-2; PGG/HS	PHS-2; COX-2; hCox-2; PGHS-2; PGG/HS; COX2
Homo sapiens	RefSeq	NM_024782.1	ILMN_21939	NHEJ1	NM_024782.1	NM_024782.1		79840	13376141	NM_024782.1	NHEJ1	NP_079058.1	ILMN_1696214	0001740477	S	1699	TCCTCCCGCCTCATCCTTCTGCATAACTGGGACTAAAGGCACACACCACC	2	-	219648580-219648629	2q35f	Homo sapiens nonhomologous end-joining factor 1 (NHEJ1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16439204] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16439205] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [pmid 16439205] [evidence IMP]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [pmid 16439204] [evidence IMP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 16439204] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [pmid 16439205] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 16439204] [evidence IMP]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [pmid 16439204] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate [goid 51351] [pmid 16439205] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16439205] [evidence IPI]	FLJ12610; XLF	FLJ12610; XLF
Homo sapiens	RefSeq	NM_032251.3	ILMN_38521	CCDC88B	NM_032251.4	NM_032251.4		283234	88196789	NM_032251.4	CCDC88B	NP_115627.5	ILMN_1772208	0004860711	S	4428	GTACAGGAACCGGAGAAACGTCCCCTCACCCCATCCCTCAGCCAGTGACA	11	+	63881095-63881142:63881143-63881144	11q13.1b	Homo sapiens coiled-coil domain containing 88B (CCDC88B), mRNA.				BRLZ; FLJ37970; FLJ00354; DKFZp434G0920; CCDC88; HkRP3	BRLZ; FLJ00354; DKFZp434G0920
Homo sapiens	RefSeq	NM_022474.2	ILMN_21733	MPP5	NM_022474.2	NM_022474.2		64398	38570141	NM_022474.2	MPP5	NP_071919.2	ILMN_1750689	0006250288	S	4893	CCCTCTGTGGTTCTGACTGGAGACCCCAGTGTGGGGGAGGTCTTACCATT	14	+	66871825-66871874	14q23.3b	Homo sapiens membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) (MPP5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ12615; PALS1	FLJ12615; PALS1
Homo sapiens	Unigene	Hs.216641	ILMN_82436	HS.216641	Hs.216641		Hs.216641		27840907	BX117975			ILMN_1897650	0001980397	S	221	AAGGGCAGTTGCAAAACTAGTACCTGCCTCATCAGGGTGTTGTGGGGTTG	9	+	88572387-88572436		BX117975 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGp998N036123, mRNA sequence					
Homo sapiens	RefSeq	NM_001422.2	ILMN_13737	ELF5	NM_001422.2	NM_001422.2		2001	38201715	NM_001422.2	ELF5	NP_001413.1	ILMN_1684699	0006280161	I	58	TCTCTTGCCTTGAAAGCCTCCTCTTTGGACCTAGCCACCGCTGCCCTCAC	11	-	34527300-34527300:34535224-34535272	11p13c	Homo sapiens E74-like factor 5 (ets domain transcription factor) (ELF5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9840936] [evidence TAS]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9840936] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	ESE2	ESE2
Homo sapiens	Unigene	Hs.509267	ILMN_97877	HS.509267	Hs.509267		Hs.509267		21010712	BQ346651			ILMN_1870360	0000730431	S	36	ACATTTGCTGGGTGGGCAGAAGAGAGAGCCTGGGAGGAAATATCAGGCGC	14	-	49400656-49400705		RC4-NT0057-160600-016-b11 NT0057 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_013282.3	ILMN_12005	UHRF1	NM_013282.3	NM_013282.3		29128	115430232	NM_013282.3	UHRF1	NP_037414.3	ILMN_2401352	0001510278	A	2040	AAGTCCGGGTTTCTCGTGTGGCGCTACCTTCTGCGGAGGGACGATGATGA	19	+	4901898-4901947	19p13.3c	Homo sapiens ubiquitin-like with PHD and ring finger domains 1 (UHRF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10646863] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10646863] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1868030] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10646863] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10646863] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17934516] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Np95; hNP95; MGC138707; ICBP90; RNF106; FLJ21925	huNp95; Np95; ICBP90; RNF106; FLJ21925
Homo sapiens	RefSeq	NM_006389.2	ILMN_167916	HYOU1	NM_006389.2	NM_006389.2		10525	13699861	NM_006389.2	HYOU1	NP_006380.1	ILMN_2141790	0000520189	S	4190	AGGGTCAGGGCTGGCCTTCCTCTGTGCATCACTCTGCTAGGTTGGGGGCC	11	-	118420426-118420475	11q23.3e	Homo sapiens hypoxia up-regulated 1 (HYOU1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9020069] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9020069] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DKFZp686N08236; ORP150	DKFZp686N08236; ORP150
Homo sapiens	RefSeq	NM_152553.2	ILMN_18623	RNF217	NM_152553.2	NM_152553.2		154214	34303935	NM_152553.2	RNF217	NP_689766.1	ILMN_1722089	0006380048	S	1541	TGCTTGGACTGTCTTTGAACTCTGCACCTCCTTCCAGGCCATCTTGTGAG	6	+	125404074-125404123	6q22.31e	Homo sapiens ring finger protein 217 (RNF217), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which a ubiquitin moiety, or multiple moieties, are covalently attached to the target protein, thereby initiating the degradation of that protein [goid 42787] [evidence ISS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C6orf172; MGC26996; dJ84N20.1; IBRDC1	C6orf172; MGC26996; dJ84N20.1; IBRDC1
Homo sapiens	RefSeq	XM_935803.1	ILMN_34587	LOC641741	XM_935803.1	XM_935803.1		641741	89026998	XM_935803.1	LOC641741	XP_940896.1	ILMN_1657163	0007400382	S	241	ATGAATCTTTTACCTGGAGTCAAGACATGGGCAGGATGATGGAACTTATC					PREDICTED: Homo sapiens hypothetical protein LOC641741 (LOC641741), mRNA.					
Homo sapiens	RefSeq	NM_178310.1	ILMN_12922	SNAI3	NM_178310.1	NM_178310.1		333929	77404437	NM_178310.1	SNAI3	NP_840101.1	ILMN_1690262	0004880017	S	1387	TTCCTCAGTAGGCACAACTACCTCTCAGCCAGCCCCCGCCAGCCTTTGGT	16	-	87271867-87271916	16q24.3a	Homo sapiens snail homolog 3 (Drosophila) (SNAI3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SNAIL3; MGC129606; Zfp293; SMUC; ZNF293	SNAIL3; MGC129606; Zfp293; SMUC; ZNF293
Homo sapiens	RefSeq	NM_206966.1	ILMN_26219	C5ORF46	NM_206966.2	NM_206966.2		389336	122114661	NM_206966.2	C5orf46	NP_996849.2	ILMN_1718866	0001450161	S	149	GGCAAAGACCCAAAGCCAGACTTCCCCAAATTCCTAAGCCTCCTGGGCAC	5	-	147281245-147281294	5q33.1a	Homo sapiens chromosome 5 open reading frame 46 (C5orf46), mRNA.					
Homo sapiens	RefSeq	XM_930721.1	ILMN_42384	LOC653071	XM_930721.1	XM_930721.1		653071	88978560	XM_930721.1	LOC653071	XP_935814.1	ILMN_1659365	0006760343	I	65	TCCTGGTGTAGAGAAGTCCCTCAACCTATTGTGCAATGAGTTTTGAGAAG	4	-	62723-62738:62739-62772		PREDICTED: Homo sapiens similar to CG32820-PA, isoform A, transcript variant 5 (LOC653071), mRNA.					
Homo sapiens	RefSeq	XM_943499.1	ILMN_43699	LOC648900	XM_943499.1	XM_943499.1		648900	89047513	XM_943499.1	LOC648900	XP_948592.1	ILMN_1663455	0000870358	S	21	TACCACCAACGACTGCAGTCTGCCCCACCGCCACCAACGACTGCAGTCCG					PREDICTED: Homo sapiens hypothetical protein LOC648900 (LOC648900), mRNA.					
Homo sapiens	RefSeq	NM_003746.1	ILMN_137049	DNCL1	NM_003746.1	NM_003746.1		8655	4505812	NM_003746.1	DNCL1	NP_003737.1	ILMN_1795227	0004230520	S	369	TGGACTGTGCCACACACCCAGTGATCCATCCAGAAACAAGGACTGCAGCC	12	+	119420402-119420451	12q24.31a	Homo sapiens dynein, cytoplasmic, light polypeptide 1 (DNCL1), mRNA.				PIN; MGC126138; hdlc1; DLC1; MGC126137; LC8; DLC8	PIN; DLC1; MGC126137; DLC8; MGC126138; hdlc1; LC8
Homo sapiens	RefSeq	NM_015256.2	ILMN_29379	ACSL6	NM_001009185.1	NM_001009185.1		23305	57165411	NM_001009185.1	ACSL6	NP_001009185.1	ILMN_1737418	0001190746	A	1966	TTTGGTAGGCATTGTTGTGCCTGACCCTGAAGTTATGCCCTCCTGGGCCC	5	-	131329897-131329944:131330008-131330009	5q31.1b	Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence NAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10548543] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 10548543] [evidence NAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [pmid 10548543] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	FACL6; ACS2; KIAA0837; LACS5; LACS2; FLJ16173	FACL6; ACS2; KIAA0837; LACS5; LACS2; FLJ16173
Homo sapiens	RefSeq	NM_001009185.1	ILMN_29379	ACSL6	NM_001009185.1	NM_001009185.1		23305	57165411	NM_001009185.1	ACSL6	NP_001009185.1	ILMN_1730025	0005890040	I	1097	GTGATCTTTCCGAGACAGGACGATGTGCTCATCTCCTTCCTGCCTCTGGC	5	-	131347222-131347246:131347247-131347271	5q31.1b	Homo sapiens acyl-CoA synthetase long-chain family member 6 (ACSL6), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence NAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10548543] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 10548543] [evidence NAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [pmid 10548543] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	FACL6; ACS2; KIAA0837; LACS5; LACS2; FLJ16173	FACL6; ACS2; KIAA0837; LACS5; LACS2; FLJ16173
Homo sapiens	RefSeq	NM_014250.1	ILMN_16524	HMGXB4	NM_014250.1	NM_014250.1		10042	51173870	NM_014250.1	HMGXB4	NP_055065.1	ILMN_2300636	0000450243	A	2639	GGGGGGTGAAGCTGTCAATGCCACCAGTTGGACCTCCATACATTCTGAGC	22	+	34020331-34020380	22q12.3c	Homo sapiens HMG box domain containing 4 (HMGXB4), transcript variant 2, mRNA.				HMGBCG; THC211630	THC211630; HMGBCG
Homo sapiens	RefSeq	NM_152600.1	ILMN_10410	ZNF579	NM_152600.2	NM_152600.2		163033	110681707	NM_152600.2	ZNF579	NP_689813.2	ILMN_1761722	0000770148	S	1978	AAAAAAGGCGGCGGACAGTTGGCCAGAGGGATGGAGACTGGTGGGGACGC	19	-	60780843-60780892	19q13.42c	Homo sapiens zinc finger protein 579 (ZNF579), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ35453	FLJ35453
Homo sapiens	Unigene	Hs.565629	ILMN_118081	HS.565629	Hs.565629		Hs.565629		11598359	BF513180			ILMN_1901774	0001070113	S	137	CCGAGCGTCCCAGTTGCTTTTCTTACTTGTTGGCGGAGTGAGGCAGGGAG	20	-	61921539-61921588		UI-H-BW1-amj-d-06-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3070115 3, mRNA sequence					
Homo sapiens	RefSeq	XR_037893.1	ILMN_344640	LOC100131254	XR_037893.1	XR_037893.1		100131254	169172473	XR_037893.1	LOC100131254		ILMN_3286845	0002000730	M	1596	ACCAAAATAGAAAGATGAAAGGCTGAAATGGCTTTCCTTACTGGATGAGG				8q11.23d	PREDICTED: Homo sapiens misc_RNA (LOC100131254), miscRNA.					
Homo sapiens	RefSeq	NM_015849.2	ILMN_16272	CELA2B	NM_015849.2	NM_015849.2		51032	58331210	NM_015849.2	CELA2B	NP_056933.2	ILMN_1688458	0006660634	S	609	CCGTGAAGACGAATATGATCTGTGCTGGGGGTGATGGCGTGATATGCACC	1	+	15685073-15685122	1p36.21a	Homo sapiens chymotrypsin-like elastase family, member 2B (CELA2B), mRNA.				MGC142102; MGC142100; MGC97052; RP11-265F14.2	MGC142102; MGC142100; MGC97052; RP11-265F14.2
Homo sapiens	RefSeq	NM_139209.2	ILMN_9069	GRK7	NM_139209.2	NM_139209.2		131890	51896040	NM_139209.2	GRK7	NP_631948.1	ILMN_1767827	0000940497	S	1680	CCCCAACAGACCTACGGGTTGTGAGGAGGGTAATTCATCCAAGTCTGGCG	3	+	141535826-141535875	3q23c	Homo sapiens G protein-coupled receptor kinase 7 (GRK7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GPRK7	GPRK7
Homo sapiens	RefSeq	XM_001724973.1	ILMN_349787	LOC645822	XM_001724973.1	XM_001724973.1		645822	169211470	XM_001724973.1	LOC645822	XP_001725025.1	ILMN_3216298	0007320767	A	752	ACAGTGATGGGCGACCAGACTGGGAAGTAGCTGCAGAGGCCTGAGACAAC				17q23.2d	PREDICTED: Homo sapiens similar to ubiquitin specific peptidase 32 (LOC645822), mRNA.					
Homo sapiens	RefSeq	NM_003329.2	ILMN_16294	TXN	NM_003329.2	NM_003329.2		7295	50592993	NM_003329.2	TXN	NP_003320.2	ILMN_1680314	0004290543	S	43	CGTCAGACTCCAGCAGCCAAGATGGTGAAGCAGATCGAGAGCAAGACTGC	9	-	113013737-113013742:113018692-113018715:113018716-113018735	9q31.3a	Homo sapiens thioredoxin (TXN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16750198] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11517226] [evidence EXP]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10947064] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10947064] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10947064] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 3170595] [evidence TAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15480426] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10814541] [evidence IPI]	DKFZp686B1993; TRX; MGC61975	DKFZp686B1993; TRX; MGC61975
Homo sapiens	RefSeq	TXN	ILMN_16294	TXN	NM_003329.2	NM_003329.2		7295	50592993	NM_003329.2	TXN	NP_003320.2	ILMN_2038776	0003940446	S	23	CATCGGTCCTTACAGCCGCTCGTCAGACTCCAGCAGCCAAGATGGTGAAG	9	-	113018706-113018715:113018716-113018755	9q31.3a	Homo sapiens thioredoxin (TXN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16750198] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11517226] [evidence EXP]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10947064] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10947064] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10947064] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 3170595] [evidence TAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15480426] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10814541] [evidence IPI]	DKFZp686B1993; TRX; MGC61975	DKFZp686B1993; TRX; MGC61975
Homo sapiens	RefSeq	NM_015178.1	ILMN_23405	RHOBTB2	NM_015178.1	NM_015178.1		23221	14165285	NM_015178.1	RHOBTB2	NP_055993.1	ILMN_2195957	0001090487	S	4874	TGGGGAGTCGGATTCAGGAAACACCCCCAGGAGGCCAAGCCTGAAAACAG	8	+	22933450-22933499	8p21.3a	Homo sapiens Rho-related BTB domain containing 2 (RHOBTB2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	KIAA0717; DBC2	KIAA0717; DBC2
Homo sapiens	RefSeq	XM_930350.1	ILMN_35350	LOC653524	XM_930350.1	XM_930350.1		653524	89041232	XM_930350.1	LOC653524	XP_935443.1	ILMN_1798429	0000540070	I	939	GGGCCCTGGTGGTATAAAGGTACTGAGACTTGCCTGTGTTTAGGGCTTCC	17	+	18542992-18543041		PREDICTED: Homo sapiens similar to tripartite motif-containing 16, transcript variant 1 (LOC653524), mRNA.					
Homo sapiens	RefSeq	NM_001880.2	ILMN_12901	ATF2	NM_001880.2	NM_001880.2		1386	22538421	NM_001880.2	ATF2	NP_001871.2	ILMN_1748271	0002100735	S	1731	CACAGATCGTTATGGCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGTTGA	2	-	175939336-175939336:175939337-175939385	2q31.1g	Homo sapiens activating transcription factor 2 (ATF2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9030721] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10878576] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10909971] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2529117] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC111558; CRE-BP1; HB16; CREB2; TREB7	MGC111558; CRE-BP1; CREB2; TREB7; HB16
Homo sapiens	RefSeq	NM_182901.1	ILMN_168221	C11ORF17	NM_182901.2	NM_182901.2		56672	116174739	NM_182901.2	C11orf17	NP_878904.2	ILMN_1665660	0004880731	I	1	AGATGAAAATGGAAGGGGCGGGCGCGCTAGGCCTAGTCCTGGCTGGGCTC	11	+	8889378-8889427	11p15.4a	Homo sapiens chromosome 11 open reading frame 17 (C11orf17), transcript variant 1, mRNA.				BCA3; AKIP1	BCA3; AKIP1
Homo sapiens	RefSeq	NM_020642.2	ILMN_168221	C11ORF17	NM_182901.2	NM_182901.2		56672	116174739	NM_182901.2	C11orf17	NP_878904.2	ILMN_1788356	0002190753	A	925	AGTGCTGACTGGGTCAGCCTTCCGGGAACTGGAGTCTGTCTCTTTCAGTG	11	+	8897700-8897749	11p15.4a	Homo sapiens chromosome 11 open reading frame 17 (C11orf17), transcript variant 1, mRNA.				BCA3; AKIP1	BCA3; AKIP1
Homo sapiens	RefSeq	NM_020642.2	ILMN_168221	C11ORF17	NM_182901.2	NM_182901.2		56672	116174739	NM_182901.2	C11orf17	NP_878904.2	ILMN_1752988	0006270112	I	1290	GCCTTTTTTAACTTGAGGGTGTAGAGGTCCTCCACGCTTGTTTGCCTGAA	11	+	8898065-8898114	11p15.4a	Homo sapiens chromosome 11 open reading frame 17 (C11orf17), transcript variant 1, mRNA.				BCA3; AKIP1	BCA3; AKIP1
Homo sapiens	RefSeq	XM_378661.2	ILMN_37490	C17ORF51	XM_378661.2	XM_378661.2		339263	89041300	XM_378661.2	C17orf51	XP_378661.1	ILMN_1808625	0000730639	I	45	GAGCTCCGTGGCGGGTGTCTGAAGTCGTGAGTTTACTGCTTGTAAGGAAC	17	-	21395434-21395483	17p11.2b	PREDICTED: Homo sapiens chromosome 17 open reading frame 51 (C17orf51), mRNA.					
Homo sapiens	RefSeq	NM_198550.1	ILMN_20077	HFM1	NM_001017975.3	NM_001017975.3		164045	130484566	NM_001017975.3	HFM1	NP_001017975.3	ILMN_1796572	0006250376	S	4119	CTGCTATGCCCAAGTTCAGTGCATCCTCCATGACAAAATTACCTCAACAA	1	-	91728054-91728103	1p22.2a	Homo sapiens HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) (HFM1), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ39011; MER3; RP11-539G11.1; MGC163397; FLJ36760; SEC63D1	RP11-539G11.1; FLJ36760
Homo sapiens	RefSeq	XM_944419.1	ILMN_30733	LOC440334	XM_944419.1	XM_944419.1		440334	89040643	XM_944419.1	LOC440334	XP_949512.1	ILMN_1676577	0005290113	A	692	AAGGCTGGACTGTCTTCACAGGACACCAGGGAGAAGCCTCAAGCCACTGC					PREDICTED: Homo sapiens hypothetical LOC440334 (LOC440334), mRNA.					
Homo sapiens	Unigene	Hs.537983	ILMN_103629	HS.537983	Hs.537983		Hs.537983		3756516	AI203910			ILMN_1896121	0004920735	S	60	GGGTAGAAGAGGTGAAAAGGGGACTGAGAACGAACAGCCTGCAAAGGAGG	12	+	52911056-52911066		qd72g01.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1735056 3, mRNA sequence					
Homo sapiens	Unigene	Hs.551244	ILMN_110551	HS.551244	Hs.551244		Hs.551244		6656241	AW269211			ILMN_1877890	0006480328	S	189	CCTGCAAGGCATCTATTAGGGCTTCTGGCACTGCTGCTTCTGCTAACTGC	5	+	71890161-71890210		xs34e11.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2771564 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001018159.1	ILMN_19510	NAE1	NM_001018159.1	NM_001018159.1		8883	66363685	NM_001018159.1	NAE1	NP_001018169.1	ILMN_1756308	0003450671	I	136	TCCTCCATACATTTGACAGCTGTCTGGGCCCTTATGGAGCATACAGTGGA	16	-	66861925-66861974	16q22.1a	Homo sapiens NEDD8 activating enzyme E1 subunit 1 (NAE1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [pmid 14557245] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8626687] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 14557245] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8626687] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A cell cycle checkpoint which halts replication in response to nucleotide depletion [goid 31574] [pmid 10722740] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 14557245] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 10722740] [evidence IDA]; Covalent attachment of the ubiquitin-like protein NEDD8 (RUB1) to another protein [goid 45116] [pmid 10207026] [evidence IDA]; Covalent attachment of the ubiquitin-like protein NEDD8 (RUB1) to another protein [goid 45116] [pmid 12740388] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15361859] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10722740] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8626687] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14557245] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12694406] [evidence IPI]; Catalysis of the initiation of the NEDD8 (RUB1) conjugation cascade [goid 19781] [pmid 12740388] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 12740388] [evidence IPI]	HPP1; A-116A10.1	HPP1; A-116A10.1
Homo sapiens	RefSeq	NM_144981.1	ILMN_5351	IMMP1L	NM_144981.1	NM_144981.1		196294	21450678	NM_144981.1	IMMP1L	NP_659418.1	ILMN_3236536	0001940639	S	95	GGGGCCCGAGGAATTTCAGACCTGAACAATCAGGTGGACAACTTCTTGTG	11	-	31495293-31495333:31531066-31531074	11p13f	Homo sapiens IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) (IMMP1L), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	FLJ25059	FLJ25059
Homo sapiens	RefSeq	XM_937848.1	ILMN_173814	LOC440297	XR_017409.1	XR_017409.1		440297	113425355	XR_017409.1	LOC440297		ILMN_1705869	0004150092	A	2886	TCCATCCATATTGGCGGTGACCCAGACATGCCTGTCCTCGTGGTGCCCGA	15	+	80542901-80542950	15q25.2a	PREDICTED: Homo sapiens similar to melanoma-associated chondroitin sulfate proteoglycan 4 (LOC440297), mRNA.					
Homo sapiens	RefSeq	NM_013342.1	ILMN_12268	TFPT	NM_013342.2	NM_013342.2		29844	142351171	NM_013342.2	TFPT	NP_037474.1	ILMN_1709451	0001500678	S	881	GAGCAGGAAATGCGCTGACTCCAGAGCTGGCCCCGGTGCAGATTAAGGTT	19	-	59302280-59302288:59303145-59303185	19q13.42a	Homo sapiens TCF3 (E2A) fusion partner (in childhood Leukemia) (TFPT), mRNA.				FB1; amida	FB1; amida
Homo sapiens	RefSeq	NM_199000.1	ILMN_18170	LHFPL3	NM_199000.2	NM_199000.2		375612	108773777	NM_199000.2	LHFPL3	NP_945351.1	ILMN_1663718	0005260750	S	1274	TCCTATCTCAATAGCCAAGAGGCTGATCAAGCGTCATTTATTGAGGAAGC	7	+	104164493-104164542	7q22.1h	Homo sapiens lipoma HMGIC fusion partner-like 3 (LHFPL3), mRNA.				LHFPL4	
Homo sapiens	RefSeq	NM_000880.2	ILMN_1393	IL7	NM_000880.2	NM_000880.2		3574	28610152	NM_000880.2	IL7	NP_000871.1	ILMN_1705769	0004920367	S	956	GGCCAGGTTAAAGGAAGAAAACCAGCTGCCCTGGGTGAAGCCCAACCAAC	8	-	79811273-79811317:79813294-79813298	8q21.12a	Homo sapiens interleukin 7 (IL7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2643102] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [pmid 2643102] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2643102] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 2643102] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 2643102] [evidence TAS]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISS]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence ISS]	Interacting selectively with the interleukin-7 receptor [goid 5139] [evidence IEA]; Interacting selectively with the interleukin-7 receptor [goid 5139] [evidence IEA]; Interacting selectively with the interleukin-7 receptor [goid 5139] [pmid 2643102] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8266077] [evidence IPI]	IL-7	IL-7
Homo sapiens	RefSeq	NM_000880.2	ILMN_1393	IL7	NM_000880.2	NM_000880.2		3574	28610152	NM_000880.2	IL7	NP_000871.1	ILMN_2059744	0003850768	S	1644	GAGAGTCATAAACCTTAAGTAAGCAACAGCATAACAAGGTCCAAGATACC	8	-	79807944-79807993	8q21.12a	Homo sapiens interleukin 7 (IL7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2643102] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [pmid 2643102] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2643102] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 2643102] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 2643102] [evidence TAS]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISS]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence ISS]	Interacting selectively with the interleukin-7 receptor [goid 5139] [evidence IEA]; Interacting selectively with the interleukin-7 receptor [goid 5139] [evidence IEA]; Interacting selectively with the interleukin-7 receptor [goid 5139] [pmid 2643102] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8266077] [evidence IPI]	IL-7	IL-7
Homo sapiens	RefSeq	NM_006005.2	ILMN_18545	WFS1	NM_006005.2	NM_006005.2		7466	13376995	NM_006005.2	WFS1	NP_005996.1	ILMN_1759023	0006590224	S	3536	GGAGGTCCCTGCCAGTGTTTAGAAGAGCCTGACTGTGTTCAGTGCCTTGG	4	+	6355789-6355838	4p16.1f	Homo sapiens Wolfram syndrome 1 (wolframin) (WFS1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 11181571] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 14527944] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 11181571] [evidence ISS]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [pmid 9817917] [evidence IMP]; Renal process involved in the maintenance of internal equilibrium of water in the body [goid 3091] [pmid 9817917] [evidence IMP]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [pmid 17947299] [evidence TAS]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [pmid 16989814] [evidence IC ]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9817917] [evidence IMP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9771706] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that results in the attainment of the full functional capacity of a protein [goid 22417] [pmid 16989814] [evidence IC ]; The regulation of the levels, transport, and metabolism of calcium ions within the endoplasmic reticulum of a cell or between the endoplasmic reticulum and its surroundings [goid 32469] [pmid 16989814] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [pmid 9817917] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43069] [pmid 9771706] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [pmid 9817917] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [pmid 9771706] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [pmid 9817917] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51247] [pmid 17947299] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51928] [pmid 16989814] [evidence IDA]; The regulation of the levels, transport, and metabolism of calcium ions [goid 55074] [pmid 14527944] [evidence IDA]	Interacting selectively with an ATPase, any enzyme that catalyzes the hydrolysis of ATP [goid 51117] [pmid 17947299] [evidence IPI]	DFNA14; DIDMOAD; WFRS; WOLFRAMIN; DFNA6; WFS; DFNA38	DFNA14; DIDMOAD; WFRS; WOLFRAMIN; DFNA6; WFS; DFNA38
Homo sapiens	RefSeq	NM_182487.1	ILMN_12652	OLFML2A	NM_182487.2	NM_182487.2		169611	116014338	NM_182487.2	OLFML2A	NP_872293.2	ILMN_1761425	0004640209	S	6186	CTTAAGCAACCTGCTCAGGGTCACGTCTCCAACAGGCAGTAGAGTCAAGG	9	+	126616626-126616675	9q33.3a	Homo sapiens olfactomedin-like 2A (OLFML2A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]		Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with a component of the extracellular matrix [goid 50840] [evidence IEA]	PRO34319; FLJ00237	PRO34319; FLJ00237
Homo sapiens	RefSeq	XM_001717820.1	ILMN_337818	LOC100134139	XM_001717820.1	XM_001717820.1		100134139	169210315	XM_001717820.1	LOC100134139	XP_001717872.1	ILMN_3238063	0003870544	S	926	GTGACTTCCTGAGGCCAAAACAGGGTAAGCTGCAGGCGGAGGATGACTGG					PREDICTED: Homo sapiens hypothetical LOC100134139 (LOC100134139), mRNA.					
Homo sapiens	RefSeq	XM_372429.4	ILMN_44416	LOC647816	XM_936875.2	XM_936875.2		647816	113423078	XM_936875.2	LOC647816	XP_941968.2	ILMN_1661957	0002940465	S	399	TGGTGCTGATATCAGCGGCTCCTTATTTGAAGAAAGCACTAAACAATGGA					PREDICTED: Homo sapiens similar to jumonji domain containing 2D (LOC647816), mRNA.					
Homo sapiens	RefSeq	NM_015895.3	ILMN_20255	GMNN	NM_015895.3	NM_015895.3		51053	41393571	NM_015895.3	GMNN	NP_056979.1	ILMN_1720114	0004830373	S	878	GAGGATTCTCTAGTGGAAGACTCAGAAATTGGCACGTGTGCTGAAGGAAC	6	+	24785941-24785990	6p22.2b	Homo sapiens geminin, DNA replication inhibitor (GMNN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11125146] [evidence EXP]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 9635433] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 9635433] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]	Gem; RP3-369A17.3	Gem; RP3-369A17.3
Homo sapiens	RefSeq	NM_016531.3	ILMN_20320	KLF3	NM_016531.3	NM_016531.3		51274	46048173	NM_016531.3	KLF3	NP_057615.2	ILMN_2048507	0000870066	S	2460	CCTGTGTGAGCTGTTAAGGTGCCAAATTGGCTGTCATTTGTATTCATGAC	4	+	38376396-38376445	4p14c	Homo sapiens Kruppel-like factor 3 (basic) (KLF3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10582345] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10582345] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BKLF; MGC48279	BKLF; MGC48279
Homo sapiens	Unigene	Hs.280482	ILMN_84506	HS.280482	Hs.280482		Hs.280482		9509467	BE463692			ILMN_1896838	0006550152	S	114	GGCCAGGAAGGCCCCTAAGAGGGCAGAATGGAAAAGTCTAAGAGCAGAGG	13	-	47742330-47742379		hx79b12.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:3194015 3, mRNA sequence					
Homo sapiens	RefSeq	NR_002786.1	ILMN_12793	CIDECP	NR_002786.1	NR_002786.1		152302	84872072	NR_002786.1	CIDECP		ILMN_2170080	0001470253	S	413	CTCATCCCGACCTGTCTGAAGATACTGCAGTGAAAGCCCAAGCCCTAGCT	3	-	10059577-10059626	3p25.3c	Homo sapiens cell death-inducing DFFA-like effector c pseudogene (CIDECP), non-coding RNA.				CICE	CICE
Homo sapiens	RefSeq	NM_001005365.2	ILMN_28840	POTEA	NM_001002920.1	NM_001002920.1		340441	50897293	NM_001002920.1	POTEA	NP_001002920.1	ILMN_1671474	0006380561	A	1144	AGTGGATAACCTTGATGACATAACATGGCCATCAGAAATAGCGTCAGAGG	8	+	43197350-43197399	8p11.1b	Homo sapiens POTE ankyrin domain family, member A (POTEA), transcript variant 1, mRNA.				POTE8; POTE-8	POTE8; POTE-8
Homo sapiens	RefSeq	NM_033104.2	ILMN_13642	STON2	NM_033104.2	NM_033104.2		85439	21361862	NM_033104.2	STON2	NP_149095.2	ILMN_1670705	0000460577	S	2575	GTGTGGAGGATAAACCGACTGCCGGACAAAAACTCAGCTTCCGGTCACCC	14	-	81737203-81737216:81743245-81743280	14q31.1c	Homo sapiens stonin 2 (STON2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [pmid 14726597] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11454741] [evidence IPI]	STNB; STNB2; STN2	STNB; STNB2; STN2
Homo sapiens	RefSeq	NM_002492.2	ILMN_20286	NDUFB5	NM_002492.2	NM_002492.2		4711	33519467	NM_002492.2	NDUFB5	NP_002483.1	ILMN_1807397	0000830762	S	719	TGTTGGTTCAGATTGAGGCTTTTGTTTGAGGAGTTTGGCTTCCAGTCCCC	3	+	179341948-179341997	3q26.33a	Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa (NDUFB5), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	MGC12314; DKFZp686N02262; CI-SGDH; SGDH; FLJ30597; MGC111204	DKFZp686N02262; CI-SGDH; SGDH; FLJ30597; MGC12314; MGC111204
Homo sapiens	RefSeq	XR_038324.1	ILMN_349158	LOC728693	XR_038324.1	XR_038324.1		728693	169204980	XR_038324.1	LOC728693		ILMN_3304872	0007650706	M	227	GCCCACATAACTGAAGCAAGACTAAGCAAAAAGAAAAAGCTGGAGGCATC				12q24.22a	PREDICTED: Homo sapiens misc_RNA (LOC728693), miscRNA.					
Homo sapiens	RefSeq	NR_002973.1	ILMN_167137	SNORA40	NR_002973.1	NR_002973.1		677822	91680842	NR_002973.1	SNORA40		ILMN_3247222	0006520164	S	50	TGCAAAAAATAAATCCTCTTTTGCAACCCAGAACTCATTGTTCAGTATGA	11	-	93468303-93468352	11q21a	Homo sapiens small nucleolar RNA, H/ACA box 40 (SNORA40), small nucleolar RNA.				ACA40	ACA40
Homo sapiens	RefSeq	NM_001017420.2	ILMN_2955	ESCO2	NM_001017420.2	NM_001017420.2		157570	63252914	NM_001017420.2	ESCO2	NP_001017420.1	ILMN_1792947	0006590279	S	2910	CCAAGGTTAGTAAATATACATAGGCTGGTGGATGAGAGACCATGGAACTG	8	+	27661976-27662025	8p21.1e	Homo sapiens establishment of cohesion 1 homolog 2 (S. cerevisiae) (ESCO2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EFO2; RBS; 2410004I17Rik	EFO2; RBS; 2410004I17Rik
Homo sapiens	RefSeq	XM_938297.1	ILMN_30715	LOC402644	XM_938297.1	XM_938297.1		402644	89025874	XM_938297.1	LOC402644	XP_943390.1	ILMN_1686811	0006130259	A	27	CGTTGCTGTCGACAGTGAGCCCTTGGACCACGTCTCCTTTGAGCTGTTTG				7p15.1d	PREDICTED: Homo sapiens similar to peptidylprolyl isomerase A isoform 1 (LOC402644), mRNA.					
Homo sapiens	RefSeq	NM_017777.1	ILMN_137374	MKS1	NM_017777.1	NM_017777.1		54903	8923323	NM_017777.1	MKS1	NP_060247.1	ILMN_1737953	0004260176	S	1728	GGCCTTGACTCACTTTTCTGGCTTGTACTCACAGTAGCAGGGGATCTGCT	17	-	53638086-53638135	17q22d	Homo sapiens Meckel syndrome, type 1 (MKS1), mRNA.				FLJ20345; MES; MKS	FLJ20345; MES; MKS
Homo sapiens	RefSeq	XM_001713923.1	ILMN_336676	LOC728802	XM_001713923.1	XM_001713923.1		728802	169162928	XM_001713923.1	LOC728802	XP_001713975.1	ILMN_3230962	0002120497	I	984	TCTTCATAGCCTGTTTGACCTGGTGCTTGTTGGCTTTGCCATCCACAGTG				1q21.1c	PREDICTED: Homo sapiens similar to hCG1981896 (LOC728802), mRNA.					
Homo sapiens	RefSeq	XR_037161.1	ILMN_333810	LOC389768	XR_037161.1	XR_037161.1		389768	169179014	XR_037161.1	LOC389768		ILMN_3274187	0004210296	M	834	CACGCACATCGTCAGGTTTCCACTAAGTGGCTACTGTCACCTCAACTCAG				9q22.1b	PREDICTED: Homo sapiens misc_RNA (LOC389768), miscRNA.					
Homo sapiens	RefSeq	NM_012129.2	ILMN_11012	CLDN12	NM_012129.2	NM_012129.2		9069	37537523	NM_012129.2	CLDN12	NP_036261.1	ILMN_1787657	0001070133	S	3178	AGTCACTTTTGAGCCCTCATCAAGCTCTCATTGTGATGGGAGGGATACCT	7	+	89882913-89882962	7q21.13b	Homo sapiens claudin 12 (CLDN12), mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]		
Homo sapiens	RefSeq	XR_038006.1	ILMN_341004	LOC100128326	XR_038006.1	XR_038006.1		100128326	169171733	XR_038006.1	LOC100128326		ILMN_3183620	0005570465	A	4515	TCAGCCTCACAGCGGACTCTCCACGCCCAGCTAGCTCTCGCCTCACTACA				7p11.2b	PREDICTED: Homo sapiens misc_RNA (LOC100128326), miscRNA.					
Homo sapiens	RefSeq	NM_014956.3	ILMN_15671	CEP164	NM_014956.4	NM_014956.4		22897	115648141	NM_014956.4	CEP164	NP_055771.4	ILMN_1740385	0001070376	S	5463	CAGCAAGGGGTCTTTGTGCAGTTGGAGATGCTGCCGTTGTGGCAGAGCGT	11	+	116789027-116789076	11q23.3b-q23.3c	Homo sapiens centrosomal protein 164kDa (CEP164), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1052	KIAA1052
Homo sapiens	RefSeq	NM_014978.1	ILMN_13257	SORCS3	NM_014978.1	NM_014978.1		22986	18379345	NM_014978.1	SORCS3	NP_055793.1	ILMN_2138662	0000870411	S	5413	GGGAGGAAAGGCCACATTTTGTACCTGTTAATTTTTGTGGGATGTTGTTC	10	+	106966834-106966870:106970895-106970907	10q25.1a-q25.1b	Homo sapiens sortilin-related VPS10 domain containing receptor 3 (SORCS3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11499680] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 11499680] [evidence NAS]	Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [pmid 11499680] [evidence NAS]	RP11-107L7.1; SORCS	RP11-107L7.1; SORCS
Homo sapiens	RefSeq	NM_014978.1	ILMN_13257	SORCS3	NM_014978.1	NM_014978.1		22986	18379345	NM_014978.1	SORCS3	NP_055793.1	ILMN_1698516	0004290674	S	5235	TCTGGGGTGAGTGGCTTTCAAAGCCTTTTAGCTTTTCCAGCACCTCAGCC	10	+	106964334-106964361:106966684-106966705	10q25.1a-q25.1b	Homo sapiens sortilin-related VPS10 domain containing receptor 3 (SORCS3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11499680] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 11499680] [evidence NAS]	Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [pmid 11499680] [evidence NAS]	RP11-107L7.1; SORCS	RP11-107L7.1; SORCS
Homo sapiens	RefSeq	XM_930003.1	ILMN_42640	LOC653799	XM_930003.1	XM_930003.1		653799	89059012	XM_930003.1	LOC653799	XP_935096.1	ILMN_1685544	0003450242	S	587	ACTCGGAGGTCACCGTGCGGGGCTTCCGGATCTATGGCTCCCCATGGTGA	22	+	42200740-42200789		PREDICTED: Homo sapiens similar to brain protein 239-like (LOC653799), mRNA.					
Homo sapiens	RefSeq	XM_932932.1	ILMN_42975	LOC645487	XM_932932.1	XM_932932.1		645487	89057844	XM_932932.1	LOC645487	XP_938025.1	ILMN_1741591	0001400494	S	94	CCACCCCAGACATGCAGAGCTGTCTGAAGTCTCAGTGGGCTCAACCAGCT	20	+	28076761-28076771:28076772-28076781:28077079-28077107		PREDICTED: Homo sapiens hypothetical protein LOC645487 (LOC645487), mRNA.					
Homo sapiens	RefSeq	XM_928032.1	ILMN_42875	LOC644944	XM_928032.1	XM_928032.1		644944	88984935	XM_928032.1	LOC644944	XP_933125.1	ILMN_1693420	0006560446	S	2	TGAGTGAACCATCAGCAATAGCCAGGGAGTACTCACCACAGGACTGGGGT	5	+	130369478-130369527		PREDICTED: Homo sapiens hypothetical protein LOC644944 (LOC644944), mRNA.					
Homo sapiens	RefSeq	NM_015233.3	ILMN_25290	MTUS2	NM_001033602.2	NM_001033602.2		23281	140161497	NM_001033602.2	MTUS2	NP_001028774.2	ILMN_1700817	0003450241	A	3731	GAGGCCTTGAGGAAGAACACAGAGGAGCAGCTGGAGATTGCATTGGCTCC	13	+	28969438-28969473:28970555-28970568	13q12.3a-q12.3b	Homo sapiens microtubule associated tumor suppressor candidate 2 (MTUS2), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_001033602.1	ILMN_25290	MTUS2	NM_001033602.2	NM_001033602.2		23281	140161497	NM_001033602.2	MTUS2	NP_001028774.2	ILMN_1753169	0007000044	I	2572	ATCCAATCTCCCGAAATCTGGTCTCCGTCCTCCCGGATACTCACGTCTCC	13	+	28572947-28572996	13q12.3a-q12.3b	Homo sapiens microtubule associated tumor suppressor candidate 2 (MTUS2), transcript variant 1, mRNA.					
Homo sapiens	Unigene	Hs.527194	ILMN_100873	HS.527194	Hs.527194		Hs.527194		34189973	BC010870			ILMN_1899105	0004390465	S	1754	TCAGGCAACAGTGATAAGAGAGGAAGCAAAGAGCACGCAGACCCCCGCCC	5	+	88018397-88018446		Homo sapiens cDNA clone IMAGE:3877950, partial cds					
Homo sapiens	RefSeq	XM_496207.2	ILMN_41028	LOC651723	XM_940940.2	XM_940940.2		651723	113427372	XM_940940.2	LOC651723	XP_946033.2	ILMN_1656949	0002140053	S	1	ATGGAGAGTCTCAAGACTGATACTGAAATGCCGTATCCTGAGGTAATAGT					PREDICTED: Homo sapiens similar to schlafen family member 13 (LOC651723), mRNA.					
Homo sapiens	RefSeq	NM_080748.2	ILMN_15797	ROMO1	NM_080748.2	NM_080748.2		140823	115430214	NM_080748.2	ROMO1	NP_542786.1	ILMN_3234993	0000620538	S	253	CTCTTCGGCACCTTTTCCTGTCTCAGGATCGGAATGCGGGGTCGAGAGCT	20	+	33751074-33751099:33752134-33752157	20q11.22b	Homo sapiens reactive oxygen species modulator 1 (ROMO1), nuclear gene encoding mitochondrial protein, mRNA.				MTGMP; ROMO1; MGC111180; bA353C18.2	MGC111180; bA353C18.2
Homo sapiens	RefSeq	NM_020159.1	ILMN_3339	SMARCAD1	NM_020159.2	NM_020159.2		56916	141802206	NM_020159.2	SMARCAD1	NP_064544.1	ILMN_1741976	0006280053	S	4488	CCTAACTTGCTAAGATGCTAGGTAGTACGACCCTCTGGATTTGGAAGGCA	4	+	95431038-95431087	4q22.2b-q22.3a	Homo sapiens SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 (SMARCAD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11031099] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA recombination, a process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents [goid 18] [pmid 11031099] [evidence IEP]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [pmid 11031099] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 11031099] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 11031099] [evidence NAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 11031099] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11031099] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA1122; ETL1; DKFZp762K2015	KIAA1122; ETL1; DKFZp762K2015
Homo sapiens	RefSeq	XR_037126.1	ILMN_340466	LOC730974	XR_037126.1	XR_037126.1		730974	169167817	XR_037126.1	LOC730974		ILMN_3223854	0006660520	A	797	GCACAGACTTCTCCGCACAGTGGGAACTGCAAAACTCTTACTGGTGCAGC				5p12c	PREDICTED: Homo sapiens misc_RNA (LOC730974), miscRNA.					
Homo sapiens	RefSeq	XM_377555.3	ILMN_45828	LOC401934	XM_377555.3	XM_377555.3		401934	88944456	XM_377555.3	LOC401934	XP_377555.3	ILMN_1712177	0000990709	S	312	GCATTTGCGGCGTGAGGAGCCTGTGTGGCTGGAGGGCACCAAGCTGTGCT				1p36.33b	PREDICTED: Homo sapiens similar to ring finger protein 183 (LOC401934), mRNA.					
Homo sapiens	RefSeq	XM_939092.1	ILMN_45545	LOC650003	XM_939092.1	XM_939092.1		650003	88952556	XM_939092.1	LOC650003	XP_944185.1	ILMN_1691178	0002600681	S	1494	CAGAAAGAGTGGCTGTAGTGGTGGGAATTTCAGGCACAGAAGTGGGCCAG					PREDICTED: Homo sapiens hypothetical protein LOC650003 (LOC650003), mRNA.					
Homo sapiens	RefSeq	NM_001003940.1	ILMN_164456	BMF	NM_001003940.1	NM_001003940.1		90427	51558687	NM_001003940.1	BMF	NP_001003940.1	ILMN_1810239	0007040356	I	104	TGGGCTTTTTCCCTCCTTCCCAATCGAGTCTGGGCGTCCAGCCCCCGAGT	15	-	40400536-40400585	15q15.1a	Homo sapiens Bcl2 modifying factor (BMF), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12591950] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12591950] [evidence EXP]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [pmid 11546872] [evidence ISS]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11546872] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11546872] [evidence IPI]	FLJ00065	FLJ00065
Homo sapiens	RefSeq	NM_022455.3	ILMN_182395	NSD1	NM_022455.3	NM_022455.3		64324	27477093	NM_022455.3	NSD1	NP_071900.2	ILMN_1707175	0007210661	I	767	GAAATGAAGTGGACGGCAGCAATGAAAAAGCAGCCCTTCTCCCAGCCCCC	5	+	176495432-176495481	5q35.2d-q35.3a	Homo sapiens nuclear receptor binding SET domain protein 1 (NSD1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11509567] [evidence IDA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence ISS]; Interacting selectively with an estrogen receptor [goid 30331] [evidence ISS]; Catalysis of the addition of a methyl group onto lysine at position 20 of the histone H4 protein [goid 42799] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence ISS]; Interacting selectively with a thyroid hormone receptor [goid 46966] [evidence ISS]; Catalysis of the addition of a methyl group onto lysine at position 36 of the histone H3 protein [goid 46975] [evidence ISS]; Interacting selectively with an androgen receptor [goid 50681] [pmid 11509567] [evidence IDA]	DKFZp666C163; SOTOS; FLJ44628; FLJ22263; STO; ARA267	DKFZp666C163; SOTOS; FLJ44628; FLJ22263; STO; ARA267; KMT3B
Homo sapiens	RefSeq	XM_944653.1	ILMN_33799	LOC654000	XM_944653.1	XM_944653.1		654000	89031980	XM_944653.1	LOC654000	XP_949746.1	ILMN_1666332	0005700392	I	2363	CCTTGGTCTCCCGATCCATGGCTGTGGTTTTTTACTCCGTTTATCACTGC					PREDICTED: Homo sapiens similar to Ribosome biogenesis protein BMS1 homolog, transcript variant 2 (LOC654000), mRNA.					
Homo sapiens	RefSeq	XM_926391.1	ILMN_1510	LSM12	NM_152344.2	NM_152344.2		124801	141803542	NM_152344.2	LSM12	NP_689557.1	ILMN_1661395	0003830475	S	224	AAACTTACAGTATGTTTCAGAAGTGGAAATAATTAATGACCGAACAGAAA	17	-	39496729-39496778	17q21.31c	Homo sapiens LSM12 homolog (S. cerevisiae) (LSM12), mRNA.				PNAS-135; FLJ30656; MGC104211	
Homo sapiens	RefSeq	NM_152344.1	ILMN_1510	LSM12	NM_152344.2	NM_152344.2		124801	141803542	NM_152344.2	LSM12	NP_689557.1	ILMN_1734428	0003460491	S	34	GCGGCTGCACTCCCAAGATGGCGGCTCCTCCGGGCGAGTACTTCAGCGTT	17	-	39499448-39499481:39499482-39499497	17q21.31c	Homo sapiens LSM12 homolog (S. cerevisiae) (LSM12), mRNA.				PNAS-135; FLJ30656; MGC104211	FLJ30656; MGC104211
Homo sapiens	RefSeq	XM_001720983.1	ILMN_344897	LOC100128009	XM_001720983.1	XM_001720983.1		100128009	169216112	XM_001720983.1	LOC100128009	XP_001721035.1	ILMN_3187894	0000270097	A	766	TTGCAACCTCTGGAGTGGAACCCTGGGAATGGGGCAGCATCACTGGCCCT				22q11.1d	PREDICTED: Homo sapiens similar to hCG1642538 (LOC100128009), mRNA.					
Homo sapiens	RefSeq	NM_032551.3	ILMN_884	KISS1R	NM_032551.3	NM_032551.3		84634	62865886	NM_032551.3	KISS1R	NP_115940.2	ILMN_1673521	0004120131	S	1368	CTCCCTCGGGAGCGGGGACTGCTGGAACAGCGGCTATTCTTCTGTTATTA	19	+	871774-871823	19p13.3i	Homo sapiens KISS1 receptor (KISS1R), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11387329] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 11387329] [evidence NAS]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [pmid 11387329] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11387329] [evidence IPI]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [pmid 11387329] [evidence IDA]	HOT7T175; AXOR12; GPR54	HOT7T175; AXOR12; GPR54
Homo sapiens	RefSeq	XR_039840.1	ILMN_338335	LOC644248	XR_039840.1	XR_039840.1		644248	169166799	XR_039840.1	LOC644248		ILMN_3279707	0005690706	M	2092	CAGTTTGTGTCTGAAGCCTCACAGATTGGGTGTGGTAAAGAGTGAGAAGG				4q22.1d	PREDICTED: Homo sapiens hypothetical LOC644248 (LOC644248), miscRNA.					
Homo sapiens	RefSeq	NM_016072.2	ILMN_5124	GOLT1B	NM_016072.3	NM_016072.3		51026	141802923	NM_016072.3	GOLT1B	NP_057156.1	ILMN_1767837	0002100368	S	2450	GGGTTTGATAATCTCCCAGTCCTTAGTAAAGATTGAGAGAGGCTGGAGCA	12	+	21561883-21561932	12p12.1e	Homo sapiens golgi transport 1 homolog B (S. cerevisiae) (GOLT1B), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	GOT1; YMR292W; CGI-141	GOT1; YMR292W; CGI-141
Homo sapiens	RefSeq	XR_019462.1	ILMN_175413	LOC650834	XR_019462.1	XR_019462.1		650834	113418263	XR_019462.1	LOC650834		ILMN_3242022	0002190328	S	121	GAGTTGGACTGTGTCTGTTGTGCAGGCCAGCCGGAGAGTGAGCTCGGCAG					PREDICTED: Homo sapiens misc_RNA (LOC650834), miscRNA.					
Homo sapiens	Unigene	Hs.436654	ILMN_91757	HS.436654	Hs.436654		Hs.436654		18983648	BM673750			ILMN_1879041	0001410338	S	451	GTCTGGTTAGTGTCTGAGGTGGTGGTTGTCGAAGGTTCCAGAGAGGTGCC	3	+	195403932-195403981		UI-E-EJ0-ahh-i-07-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahh-i-07-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_944336.1	ILMN_45327	LOC654134	XM_944336.1	XM_944336.1		654134	88957134	XM_944336.1	LOC654134	XP_949429.1	ILMN_1663387	0003940347	S	188	AAAAAAGAAAAGTAGTACCTAATCACCTCCTAGAATCAAAGGTTTATGCA					PREDICTED: Homo sapiens similar to similar to hypothetical protein (LOC654134), mRNA.					
Homo sapiens	RefSeq	NM_013246.2	ILMN_178798	CLCF1	NM_013246.2	NM_013246.2		23529	50726992	NM_013246.2	CLCF1	NP_037378.1	ILMN_1661197	0005290397	S	1555	CCAGTATTACGGTGCCTCTTCTCTGCCCCCTTTCCCAGGGTATCTGTGGG	11	-	67131876-67131925	11q13.1f	Homo sapiens cardiotrophin-like cytokine factor 1 (CLCF1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10448081] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence ISS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 10500198] [evidence NAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42517] [pmid 14632778] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 14632778] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 10500198] [evidence NAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 14632778] [evidence TAS]	CISS2; NNT1; CLC; BSF3; NR6	CISS2; NNT1; CLC; BSF3; NR6
Homo sapiens	RefSeq	NM_023938.4	ILMN_171813	C1ORF116	NM_023938.4	NM_023938.4		79098	56550121	NM_023938.4	C1orf116	NP_076427.1	ILMN_2073446	0000380026	S	5249	CTAGGCTCTTTTCCCCAGGAGAGTGATGATGGAGCATATAGATCTGGCTC	1	-	205258683-205258732	1q32.1h	Homo sapiens chromosome 1 open reading frame 116 (C1orf116), mRNA.				MGC4309; DKFZp666H2010; MGC2742; FLJ36507; SARG	MGC4309; DKFZp666H2010; MGC2742; FLJ36507; SARG
Homo sapiens	RefSeq	NM_020410.1	ILMN_12379	ATP13A1	NM_020410.1	NM_020410.1		57130	9966896	NM_020410.1	ATP13A1	NP_065143.1	ILMN_2134224	0002060193	S	3421	GGCCAGCAGAACCAGCCCCAAGCCAGCACCTTTGGTAAATAAAGCAGCAT	19	-	19617021-19617070	19p13.11a	Homo sapiens ATPase type 13A1 (ATP13A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	FLJ41786; CGI-152; FLJ31858; FLJ90317; ATP13A; DKFZp761L1623; KIAA1825; FLJ43873	FLJ41786; CGI-152; FLJ31858; FLJ90317; ATP13A; DKFZp761L1623; KIAA1825; FLJ43873
Homo sapiens	RefSeq	XM_379386.2	ILMN_38730	LOC285768	XM_379386.2	XM_379386.2		285768	88990440	XM_379386.2	LOC285768	XP_379386.1	ILMN_1708492	0000540086	A	1864	GATGGTCGATCTGGTGCTAATTTGCCCAATACGGTAGCTACGCGGCAATG	6	-	907411-907460		PREDICTED: Homo sapiens hypothetical protein LOC285768 (LOC285768), mRNA.					
Homo sapiens	RefSeq	NM_138799.2	ILMN_164360	MBOAT2	NM_138799.2	NM_138799.2		129642	40548386	NM_138799.2	MBOAT2	NP_620154.2	ILMN_2347424	0004560019	A	3499	TCCCATGCATTGAAATTATGTTGGCTGAGCATGGTGGCTCACACCTGTAA	2	-	8997388-8997437	2p25.1e	Homo sapiens membrane bound O-acyltransferase domain containing 2 (MBOAT2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ14415; OACT2; FLJ90298	FLJ14415; OACT2; FLJ90298
Homo sapiens	RefSeq	NM_022377.1	ILMN_29521	ICAM4	NM_022377.2	NM_022377.2		3386	85068576	NM_022377.2	ICAM4	NP_071772.1	ILMN_1734660	0002190519	I	762	ACTAGGAGGAAGGGGGCAGAGAGAGTTATGACCCCGAGAGGGCGCACAGA	19	+	10259540-10259589	19p13.2c	Homo sapiens intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) (ICAM4), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11857637] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 6431896] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 6431896] [evidence TAS]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [pmid 8566017] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LW; CD242	LW
Homo sapiens	RefSeq	NM_016569.3	ILMN_22621	TBX3	NM_016569.3	NM_016569.3		6926	47419906	NM_016569.3	TBX3	NP_057653.3	ILMN_1701393	0002970358	I	1626	TGGCCTTCCCAAGTGATCACGCTACGTGGCAGGGGAATTATAGTTTTGGT	12	-	115117723-115117772	12q24.21a	Homo sapiens T-box 3 (TBX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11689487] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9207801] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9207801] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12032820] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [pmid 11748239] [evidence IDA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [pmid 11689487] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11689487] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11748239] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 12032820] [evidence IDA]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [pmid 9207801] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9207801] [evidence IDA]; The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory [goid 21761] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [pmid 12116211] [evidence IMP]; The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure [goid 30540] [pmid 12116211] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [pmid 12116211] [evidence IMP]; The regulated release of luteinizing hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary [goid 32275] [pmid 12116211] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the arm are generated and organized. Morphogenesis pertains to the creation of form. In humans, the arms are the two upper limbs of the body from the shoulder to the hand [goid 35117] [pmid 12116211] [evidence IMP]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [pmid 9207801] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [pmid 12116211] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [pmid 9207801] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [pmid 12032820] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [pmid 12032820] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11689487] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 10468588] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; The regulated release of follicle-stimulating hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary [goid 46884] [pmid 12116211] [evidence IMP]; The process by which the anatomical structures of the mesoderm are generated and organized. Morphogenesis pertains to the creation of form [goid 48332] [pmid 9207801] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9207801] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Any activity that stops or downregulates transcription of genes globally, and is not specific to a particular gene or gene set [goid 16565] [pmid 11689487] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 11689487] [evidence IDA]	UMS; XHL; TBX3-ISO	UMS; XHL; TBX3-ISO
Homo sapiens	RefSeq	NM_001005335.1	ILMN_21401	HNRNPL	NM_001005335.1	NM_001005335.1		3191	52632384	NM_001005335.1	HNRNPL	NP_001005335.1	ILMN_2389582	0002360608	A	1301	CCCGCTGGAGGTGACCGAGGAGAACTTCTTTGAGATCTGCGATGAGCTGG	19	-	44020115-44020131:44020877-44020909	19q13.2a	Homo sapiens heterogeneous nuclear ribonucleoprotein L (HNRNPL), transcript variant 2, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2687284] [evidence TAS]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 2687284] [evidence TAS]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2687284] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	P/OKcl.14; FLJ35509; hnRNP-L; HNRPL	P/OKcl.14; FLJ35509; hnRNP-L; HNRPL
Homo sapiens	RefSeq	NM_003316.3	ILMN_5286	TTC3	NM_003316.3	NM_003316.3		7267	49640008	NM_003316.3	TTC3	NP_003307.3	ILMN_1761476	0003440152	I	1286	CTGAGGAAGAGCAGCCAGACGAATAGGAGGAAAACCAGGAGAAGATGGTC	21	+	37378402-37378451	21q22.13a	Homo sapiens tetratricopeptide repeat domain 3 (TTC3), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TPRDIII; RNF105; DCRR1; DKFZp686M0150	TPRDIII; RNF105; DCRR1; DKFZp686M0150
Homo sapiens	RefSeq	NM_003316.3	ILMN_5286	TTC3	NM_003316.3	NM_003316.3		7267	49640008	NM_003316.3	TTC3	NP_003307.3	ILMN_1728605	0000290343	A	8759	TCTTAGAAGCTCACGCCTTAGTTTGAAACAGATTCTCCACGGTGGTCCCC	21	+	37497030-37497079	21q22.13a	Homo sapiens tetratricopeptide repeat domain 3 (TTC3), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TPRDIII; RNF105; DCRR1; DKFZp686M0150	TPRDIII; RNF105; DCRR1; DKFZp686M0150
Homo sapiens	RefSeq	XM_001726425.1	ILMN_345631	LOC642006	XM_001726425.1	XM_001726425.1		642006	169170272	XM_001726425.1	LOC642006	XP_001726477.1	ILMN_3287972	0000870047	M	606	CATGACAGTGGTGAGGGCTTCTGCTGTGTCCTCTCATTTTACTCCAGACC	7	-	57237804-57237831:57249187-57249208	7p11.2a	PREDICTED: Homo sapiens similar to glucuronidase, beta (LOC642006), mRNA.					
Homo sapiens	RefSeq	XM_925877.1	ILMN_40358	LOC653081	XM_925877.1	XM_925877.1		653081	88943945	XM_925877.1	LOC653081	XP_930970.1	ILMN_1663534	0004670400	S	49	AAAACCAAGGTGCTGCTGTTCTCTGTGGAGCTGAAAAAAGGTGGTGATGC	1	+	247184818-247184826:247186927-247186967		PREDICTED: Homo sapiens similar to similar to RPL23AP7 protein (LOC653081), mRNA.					
Homo sapiens	RefSeq	NM_005381.2	ILMN_6685	NCL	NM_005381.2	NM_005381.2		4691	55956787	NM_005381.2	NCL	NP_005372.2	ILMN_1695422	0003120458	S	2066	TGGACTGGGCCAAACCTAAGGGTGAAGGTGGCTTCGGGGGTCGTGGTGGA	2	-	232320193-232320242	2q37.1b	Homo sapiens nucleolin (NCL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 12944467] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [pmid 16403913] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 16403913] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2737305] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 16403913] [evidence IPI]	FLJ45706; C23	FLJ45706; C23
Homo sapiens	RefSeq	NM_022097.1	ILMN_7582	CHP2	NM_022097.2	NM_022097.2		63928	142353021	NM_022097.2	CHP2	NP_071380.1	ILMN_1695631	0002680332	S	2100	CCTAGAGCCAGGGAAATAAGGTCTGAGGATTCAGGATGGGGTGAAAGGTG	16	+	23677491-23677540	16p12.1b	Homo sapiens calcineurin B homologous protein 2 (CHP2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	XR_040888.1	ILMN_350134	LOC729879	XR_040888.1	XR_040888.1		729879	169163466	XR_040888.1	LOC729879		ILMN_3305354	0005910605	M	1746	TTGCAAGTGGGTGCTTCTATGAAGAGGAGGGTCCCTGGCAGGTTCCTCAG	2	-	230983693-230983742	2q37.1a	PREDICTED: Homo sapiens hypothetical protein LOC729879 (LOC729879), miscRNA.					
Homo sapiens	RefSeq	XR_000281.2	ILMN_162129	LOC728032	XM_001126962.1	XM_001126962.1		728032	113429267	XM_001126962.1	LOC728032	XP_001126962.1	ILMN_1690611	0005870544	I	473	GTGGCACGCAACGTGCAGTGGACGTACCTGCAGCCCTTTGTCATCGTCAC	22	+	17353472-17353521	22q11.21b	PREDICTED: Homo sapiens similar to Cadherin EGF LAG seven-pass G-type receptor 1 precursor (Flamingo homolog 2) (hFmi2) (LOC728032), mRNA.					
Homo sapiens	RefSeq	NM_005044.1	ILMN_167650	PRKX	NM_005044.1	NM_005044.1		5613	4826947	NM_005044.1	PRKX	NP_005035.1	ILMN_2205050	0001470367	S	5725	ATGTTGCCAACGTGCTTCTGGGGCCCCTGTCACTGCCGCTGGATGCCGCG	X	-	3532679-3532728	Xp22.33b-p22.33a	Homo sapiens protein kinase, X-linked (PRKX), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7633447] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the presence of cAMP [goid 4691] [pmid 7633447] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PKX1	PKX1
Homo sapiens	RefSeq	XM_938108.1	ILMN_38122	LOC649023	XM_938108.1	XM_938108.1		649023	89057649	XM_938108.1	LOC649023	XP_943201.1	ILMN_1669367	0004210603	S	1004	GCCTGGAGGAGTGGACAGATGAGGGTGATGACAGCAAAAGTGGTGGGAGG					PREDICTED: Homo sapiens similar to SH3-binding kinase (LOC649023), mRNA.					
Homo sapiens	RefSeq	NM_007331.1	ILMN_27418	WHSC1	NM_007331.1	NM_007331.1		7468	6594682	NM_007331.1	WHSC1	NP_015627.1	ILMN_1766112	0002100278	I	4519	GCCTGTTGACTGCTGGGCCCGATTCTGATATGAGTTAGGTGACCATGAGA	4	+	1912193-1912242	4p16.3b	Homo sapiens Wolf-Hirschhorn syndrome candidate 1 (WHSC1), transcript variant 8, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9618163] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRX5; REIIBP; NSD2; WHS; MGC176638; FLJ23286; KIAA1090; MMSET	TRX5; REIIBP; NSD2; WHS; MGC176638; FLJ23286; KIAA1090; MMSET
Homo sapiens	Unigene	Hs.537971	ILMN_103621	HS.537971	Hs.537971		Hs.537971		7704881	AW772810			ILMN_1902121	0005860259	S	70	ACAGAGTGCCAAGAGTAGGTGCTCAGGGGCTCAAGCAAGAGGCAGAGCCT	1	-	93932023-93932072		hn03d06.x1 NCI_CGAP_Thy6 Homo sapiens cDNA clone IMAGE:3021035 3, mRNA sequence					
Homo sapiens	RefSeq	NM_013309.4	ILMN_175041	SLC30A4	NM_013309.4	NM_013309.4		7782	52630415	NM_013309.4	SLC30A4	NP_037441.2	ILMN_2191167	0006590347	S	3900	GAGCCATGTCCACACCATTGCACTGCAGCCTGAGTAACAAAATGAGACCC	15	-	45775013-45775062	15q21.1a	Homo sapiens solute carrier family 30 (zinc transporter), member 4 (SLC30A4), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [pmid 9354792] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	ZNT4	ZNT4
Homo sapiens	RefSeq	XM_926061.1	ILMN_42732	LOC642576	XM_926061.1	XM_926061.1		642576	88944011	XM_926061.1	LOC642576	XP_931154.1	ILMN_1653314	0004050564	S	654	GCAGCTTGTATCTTCCCTTTCTACAGGAAATCTCAGCCGCCTAGCCCATG	1	-	62220-62266:63667-63669		PREDICTED: Homo sapiens similar to SLIT-ROBO Rho GTPase-activating protein 2 (srGAP2) (Formin-binding protein 2) (LOC642576), mRNA.					
Homo sapiens	RefSeq	NM_033067.1	ILMN_7223	DMRTB1	NM_033067.1	NM_033067.1		63948	24308351	NM_033067.1	DMRTB1	NP_149056.1	ILMN_1754187	0001070341	S	1615	TTCCTGGCCACAGCCCCTTGCCCCTCCTCTAAGGGGTTTTACTAGCAAGC	1	+	53705454-53705503	1p32.3c	Homo sapiens DMRT-like family B with proline-rich C-terminal, 1 (DMRTB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_199161.1	ILMN_28364	SAA1	NM_199161.1	NM_199161.1		6288	40316909	NM_199161.1	SAA1	NP_954630.1	ILMN_2304512	0001690563	A	366	TGATCAGGCTGCCAATGAATGGGGCAGGAGTGGCAAAGACCCCAATCACT	11	+	18247897-18247946	11p15.1d	Homo sapiens serum amyloid A1 (SAA1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 7516407] [evidence NAS]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [pmid 9815279] [evidence NAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 7561109] [evidence NAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9892621] [evidence IDA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [pmid 1697614] [evidence NAS]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [pmid 12557751] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 11830469] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 7561109] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 9252455] [evidence IDA]; The movement of a macrophage in response to an external stimulus [goid 48246] [pmid 7561109] [evidence IDA]; The directed movement of a lymphocyte in response to an external stimulus [goid 48247] [pmid 7636186] [evidence IDA]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [pmid 9605178] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 from a cell or group of cells [goid 50716] [pmid 12857601] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [pmid 9823935] [evidence NAS]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [pmid 9892621] [evidence IDA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	MGC111216; SAA; PIG4; TP53I4	MGC111216; SAA; PIG4; TP53I4
Homo sapiens	RefSeq	XM_927306.1	ILMN_46599	LOC644066	XM_927306.1	XM_927306.1		644066	89060216	XM_927306.1	LOC644066	XP_932399.1	ILMN_1664780	0006760553	S	301	AGTGCCCCCTCAGCAGTGGGCAGTGGTCCCGCTATCTGGAACCCTGTTGA	X	+	129492283-129492332	Xq25h	PREDICTED: Homo sapiens similar to CG31901-PA (LOC644066), mRNA.					
Homo sapiens	Unigene	Hs.579971	ILMN_132152	HS.579971	Hs.579971		Hs.579971		83131373	DB232221			ILMN_1888026	0007400661	S	321	CAGGAAACTGCAGGATAGAATCACGCTCGTGTGCCTGGGCAGGGAGAGCT	2	-	239362736-239362785		DB232221 TRACH3 Homo sapiens cDNA clone TRACH3026065 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001084393.1	ILMN_309269	DDTL	NM_001084393.1	NM_001084393.1		100037417	145386558	NM_001084393.1	DDTL	NP_001077862.1	ILMN_3244439	0000110392	S	1397	TCCCTGAGTATCCGTGGGAGATTTGTTCTAGAATCCCCAGAGGAAACCAG	22	+	22644510-22644559	22q11.23b	Homo sapiens D-dopachrome tautomerase-like (DDTL), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]		
Homo sapiens	Unigene	Hs.534680	ILMN_102473	HS.534680	Hs.534680		Hs.534680		41120019	XM_374029			ILMN_1871457	0002510403	S	382	TTGCGGACCTGGCGGAGATGCGCGTTCGCTTCGATTGTAGGCCATTCCTT					PREDICTED: Homo sapiens hypothetical LOC389089 (LOC389089), mRNA					
Homo sapiens	RefSeq	NM_024576.3	ILMN_162668	OGFRL1	NM_024576.3	NM_024576.3		79627	55770901	NM_024576.3	OGFRL1	NP_078852.3	ILMN_1715809	0002680079	S	1038	AAAGGAGAAAGCTCCTGCGGTTCGCCCAGAAACACTACACGCCTTCAGAG	6	+	72011271-72011320	6q13b	Homo sapiens opioid growth factor receptor-like 1 (OGFRL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	dJ331H24.1; FLJ21079; MGC102783	dJ331H24.1; FLJ21079; MGC102783
Homo sapiens	RefSeq	NM_024576.3	ILMN_162668	OGFRL1	NM_024576.3	NM_024576.3		79627	55770901	NM_024576.3	OGFRL1	NP_078852.3	ILMN_2095759	0006840347	S	816	GGGCTGTTAACTGGCAGGAAAGATTTCAGCATCTGAATGAGTCCCAGCAC	6	+	72006481-72006520:72011089-72011098	6q13b	Homo sapiens opioid growth factor receptor-like 1 (OGFRL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	dJ331H24.1; FLJ21079; MGC102783	dJ331H24.1; FLJ21079; MGC102783
Homo sapiens	RefSeq	NM_002053.1	ILMN_28413	GBP1	NM_002053.1	NM_002053.1		2633	4503938	NM_002053.1	GBP1	NP_002044.1	ILMN_1701114	0006840035	S	2180	GCATTGGTCTGGCCAAGTCTACAATGTCCCAATATCAAGGACAACCACCC	1	-	89291243-89291292	1p22.2c	Homo sapiens guanylate binding protein 1, interferon-inducible, 67kDa (GBP1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 1715024] [evidence TAS]		
Homo sapiens	RefSeq	NM_002053.1	ILMN_28413	GBP1	NM_002053.1	NM_002053.1		2633	4503938	NM_002053.1	GBP1	NP_002044.1	ILMN_2148785	0002190148	S	2388	GTTCTCCAGAGGAAGGTGGAAGAAACCATGGGCAGGAGTAGGAATTGAGT	1	-	89291035-89291084	1p22.2c	Homo sapiens guanylate binding protein 1, interferon-inducible, 67kDa (GBP1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 1715024] [evidence TAS]		
Homo sapiens	RefSeq	NR_029501.1	ILMN_388969	MIR27A	NR_029501.1	NR_029501.1		407018	262205697	NR_029501.1	MIR27A		ILMN_3309031	0000770327	S	14	TTAGCTGCTTGTGAGCAGGGTCCACACCAAGTCGTGTTCACAGTGGCTAA				19p13.12c	Homo sapiens microRNA 27a (MIR27A), microRNA.					
Homo sapiens	RefSeq	NM_001046.2	ILMN_173484	SLC12A2	NM_001046.2	NM_001046.2		6558	38569461	NM_001046.2	SLC12A2	NP_001037.1	ILMN_2059452	0000830022	S	6791	TGCAGTTGCTGCTTTGTACAGAGGTTACTGCAATAAAGGAAGTGGATTCA	5	+	127522672-127522721	5q23.3a	Homo sapiens solute carrier family 12 (sodium/potassium/chloride transporters), member 2 (SLC12A2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7629105] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7629105] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + K+(out) + Cl-(out) = Na+(in) + K+(in) + Cl-(in) [goid 8511] [pmid 7629105] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NKCC1; BSC2; MGC104233; BSC	BSC2; NKCC1; MGC104233; BSC
Homo sapiens	RefSeq	XM_929568.1	ILMN_33601	LOC646625	XM_929568.1	XM_929568.1		646625	89036680	XM_929568.1	LOC646625	XP_934661.1	ILMN_1716639	0000520343	S	1	ATGGACATTGAGAAGGTCAACTCCATGGACCTTGGAGAATTCGTGGATGT	13	-	27460724-27460773	13q12.2b	PREDICTED: Homo sapiens hypothetical LOC646625 (LOC646625), mRNA.					
Homo sapiens	RefSeq	NM_170731.3	ILMN_26926	BDNF	NM_170731.3	NM_170731.3		627	60218883	NM_170731.3	BDNF	NP_733927.1	ILMN_1793988	0001430671	I	285	TGGGGAGACGAGATTTTAAGACACTTGAGTCTCCAGGACAGCAAAGGCAC	11	-	27699538-27699587	11p14.1d	Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 3, mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 2236018] [evidence TAS]	MGC34632	MGC34632
Homo sapiens	RefSeq	XM_943395.1	ILMN_36912	LOC647784	XM_943395.1	XM_943395.1		647784	88988815	XM_943395.1	LOC647784	XP_948488.1	ILMN_1681898	0002030273	I	61	AGCTGGGCGGAGCTGGACAGCCAGTCTCAGCCTCAGGTACTCCAGTGACA					PREDICTED: Homo sapiens hypothetical protein LOC647784, transcript variant 2 (LOC647784), mRNA.					
Homo sapiens	RefSeq	NM_001007157.1	ILMN_2096	PHF14	NM_001007157.1	NM_001007157.1		9678	55769549	NM_001007157.1	PHF14	NP_001007158.1	ILMN_1653438	0006940386	I	3159	GACAGGCTACGGATGGATATGTCAGGAATGTGATTCTTCATCTTCCAAGG	7	+	11030401-11030450	7p21.3b	Homo sapiens PHD finger protein 14 (PHF14), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC176640	MGC176640
Homo sapiens	RefSeq	NM_001007157.1	ILMN_2096	PHF14	NM_001007157.1	NM_001007157.1		9678	55769549	NM_001007157.1	PHF14	NP_001007158.1	ILMN_2401770	0002030491	A	2977	CCTAGAGAGAGAAGACAAAGACAGTCTGTGTTGCAAAAGAAGCCCAAGGC	7	+	11029021-11029070	7p21.3b	Homo sapiens PHD finger protein 14 (PHF14), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC176640	MGC176640
Homo sapiens	RefSeq	NM_001007157.1	ILMN_2096	PHF14	NM_001007157.1	NM_001007157.1		9678	55769549	NM_001007157.1	PHF14	NP_001007158.1	ILMN_2401769	0002640180	A	2753	GCTCGGAATGTGACCAGGCAGGGAGCAGTGACATGGAAGCAGATATGGCC	7	+	11022564-11022613	7p21.3b	Homo sapiens PHD finger protein 14 (PHF14), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC176640	MGC176640
Homo sapiens	RefSeq	NM_012188.3	ILMN_165239	FOXI1	NM_012188.4	NM_012188.4		2299	132566534	NM_012188.4	FOXI1	NP_036320.2	ILMN_1736936	0004050433	A	1965	GGAGTGGTGTGTACCCCTAAATCCTCCCACCCCAGCACTGCCCATCTGTA	5	+	169468976-169469025	5q35.1c	Homo sapiens forkhead box I1 (FOXI1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7957066] [evidence NAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7957066] [evidence TAS]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [pmid 95045392] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC34197; HFH3; FKHL10; FREAC6	HFH3; FKHL10; MGC34197; FREAC6
Homo sapiens	RefSeq	NM_012188.3	ILMN_165239	FOXI1	NM_012188.4	NM_012188.4		2299	132566534	NM_012188.4	FOXI1	NP_036320.2	ILMN_1651437	0006370561	I	775	AAGACCACGGAGCCTCAGGACATCTTGGATGGAGCCTCACCAGGGGGCAC	5	+	169467786-169467835	5q35.1c	Homo sapiens forkhead box I1 (FOXI1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7957066] [evidence NAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7957066] [evidence TAS]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [pmid 95045392] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC34197; HFH3; FKHL10; FREAC6	HFH3; FKHL10; MGC34197; FREAC6
Homo sapiens	RefSeq	NM_183044.1	ILMN_2805	RNF6	NM_183044.1	NM_183044.1		6049	34305294	NM_183044.1	RNF6	NP_898865.1	ILMN_1687431	0001450079	I	25	GAGGGCGGGGGTGGCAAGAAAGTCAAGGTTTAGAAGTAAGCCGGAGACGC	13	-	26795766-26795815	13q12.13b	Homo sapiens ring finger protein (C3H2C3 type) 6 (RNF6), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10331950] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	DKFZp686P0776	DKFZp686P0776
Homo sapiens	RefSeq	NM_152727.4	ILMN_938	CPNE2	NM_152727.4	NM_152727.4		221184	30181235	NM_152727.4	CPNE2	NP_689940.3	ILMN_1674665	0002190338	S	1831	TTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTC	16	+	55739027-55739071:55739072-55739076	16q13c	Homo sapiens copine II (CPNE2), mRNA.				CPN2; MGC16924; COPN2; DKFZp686E06199	CPN2; MGC16924; COPN2; DKFZp686E06199
Homo sapiens	RefSeq	XM_496026.2	ILMN_175268	LOC646090	XR_017120.1	XR_017120.1		646090	113425038	XR_017120.1	LOC646090		ILMN_1676150	0004900563	S	6	TGCAGCTCACAGTGTCATTGCCTGTGTCCGCAGCTCCACGTACTGGCAGG	15	-	18742306-18742355	15q11.2a	PREDICTED: Homo sapiens similar to rhophilin-like protein (LOC646090), mRNA.					
Homo sapiens	RefSeq	NM_017434.3	ILMN_167458	DUOX1	NM_017434.3	NM_017434.3		53905	28872749	NM_017434.3	DUOX1	NP_059130.2	ILMN_2404182	0002810088	A	5240	GGGGAGCTACTGATTTGGGGCAAAGTGAAACCTCTGCTTCCAGACTTCAG	15	+	43244629-43244678	15q21.1a	Homo sapiens dual oxidase 1 (DUOX1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 10806195] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 16111680] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a cuticle, the outer layer of some animals and plants, which acts to prevent water loss [goid 42335] [pmid 11514595] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [pmid 10806195] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 50665] [pmid 10806195] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus [goid 51591] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus [goid 51591] [pmid 15062544] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 10601291] [evidence TAS]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + H+ + O2 = NAD(P)+ + H2O2 [goid 16174] [pmid 10806195] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 10806195] [evidence NAS]	THOX1; LNOX1; MGC138841; MGC138840; NOXEF1	THOX1; LNOX1; MGC138841; MGC138840; NOXEF1
Homo sapiens	RefSeq	NM_017434.3	ILMN_167458	DUOX1	NM_017434.3	NM_017434.3		53905	28872749	NM_017434.3	DUOX1	NP_059130.2	ILMN_2292636	0000670243	I	165	ACTGGCAGCAGCACTGAGACCTCAGCCTAGTCTCCTGATCCCCAAGCAGG	15	+	43211020-43211069	15q21.1a	Homo sapiens dual oxidase 1 (DUOX1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 10806195] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 16111680] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a cuticle, the outer layer of some animals and plants, which acts to prevent water loss [goid 42335] [pmid 11514595] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [pmid 10806195] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The chemical reactions and pathways resulting in the formation of hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 50665] [pmid 10806195] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus [goid 51591] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus [goid 51591] [pmid 15062544] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 10601291] [evidence TAS]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + H+ + O2 = NAD(P)+ + H2O2 [goid 16174] [pmid 10806195] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 10806195] [evidence NAS]	THOX1; LNOX1; MGC138841; MGC138840; NOXEF1	THOX1; LNOX1; MGC138841; MGC138840; NOXEF1
Homo sapiens	RefSeq	NM_181800.1	ILMN_25999	UBE2C	NM_181800.1	NM_181800.1		11065	32967284	NM_181800.1	UBE2C	NP_861516.1	ILMN_2301083	0004260368	A	426	GATAGTCCCTTGAACACACATGCTGCCGAGCTCTGGAAAAACCCCACAGC	20	+	43877911-43877959:43878755-43878755	20q13.12b	Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript variant 3, mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9122200] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 15504738] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [pmid 15504738] [evidence NAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyclins, proteins whose levels in a cell varies markedly during the cell cycle, and which play key roles in regulating cell cycle phase transitions [goid 8054] [pmid 9122200] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 9122200] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that activates or increases the rate of progression from anaphase/telophase (high mitotic CDK activity) to G1 (low mitotic CDK activity) [goid 31536] [pmid 9122200] [evidence IMP]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9122200] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBCH10; dJ447F3.2	UBCH10; dJ447F3.2
Homo sapiens	RefSeq	NM_138620.1	ILMN_2241	DDX31	NM_138620.1	NM_138620.1		64794	20336297	NM_138620.1	DDX31	NP_619526.1	ILMN_1676864	0006370392	A	1613	GGTTCCCAGCAAACTGAGGCTTGTCTGCCTAGCGGCCTTCATCCTTCAGA	9	-	135522217-135522266	9q34.13b	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 (DDX31), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	helicain B; helicain C; FLJ13633; FLJ14578; helicain A; FLJ23349	helicain B; helicain C; FLJ13633; FLJ14578; helicain A; FLJ23349
Homo sapiens	RefSeq	NM_138620.1	ILMN_2241	DDX31	NM_138620.1	NM_138620.1		64794	20336297	NM_138620.1	DDX31	NP_619526.1	ILMN_1663156	0004850050	I	2152	CCCTTGGCATCCTCCTTGGCTGTCCGGCGCGTGCATTTCTTTTTCAGAAG	9	-	135513456-135513505	9q34.13b	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 (DDX31), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	helicain B; helicain C; FLJ13633; FLJ14578; helicain A; FLJ23349	helicain B; helicain C; FLJ13633; FLJ14578; helicain A; FLJ23349
Homo sapiens	RefSeq	NM_002196.2	ILMN_22264	INSM1	NM_002196.2	NM_002196.2		3642	44890063	NM_002196.2	INSM1	NP_002187.1	ILMN_1797668	0004040474	S	2523	CTGCCCCCTCCCCACCCTGCCACTCTTGACATTCCACTGTGCGTTTTAGA	20	+	20299287-20299336	20p11.23b	Homo sapiens insulinoma-associated 1 (INSM1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	IA-1; IA1	IA-1; IA1
Homo sapiens	RefSeq	NR_002180.1	ILMN_14438	TTTY17B	NR_002180.1	NR_002180.1		474151	54312062	NR_002180.1	TTTY17B		ILMN_3245112	0000580370	S	4	GCCTTGTTGAGCTTTGAAGCACATTGAGAAGAATCTGAAATCCTTCCTCA	Y	+	25040870-25040919	Yq11.223e	Homo sapiens testis-specific transcript, Y-linked 17B (non-protein coding) (TTTY17B), non-coding RNA.					
Homo sapiens	Unigene	Hs.576072	ILMN_128253	HS.576072	Hs.576072		Hs.576072		30051873	CB857824			ILMN_1916457	0004670132	S	478	TCACGCATGGTGGCTCCATTGCACTCCAGCCCAGGCGACAGTAGGAGACT	1	+	92070870-92070879:92071397-92071436		NISC_na09g08.y1 COGENE 8.5 EAT Homo sapiens cDNA clone IMAGE:5794742 5, mRNA sequence					
Homo sapiens	RefSeq	XM_936702.1	ILMN_138502	PGM5	XM_936702.1	XM_936702.1		5239	89030374	XM_936702.1	PGM5	XP_941795.1	ILMN_1728337	0001850278	I	2306	CTGCCTTTGGGAGTCAGCAGAAACTGAAATGGCATCTAGACCTCCACTGT				9q13a-q13b	PREDICTED: Homo sapiens phosphoglucomutase 5 (PGM5), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [pmid 8175905] [evidence IDA]; A small junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens [goid 5914] [pmid 8175905] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 8175905] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [pmid 10867799] [evidence IDA]; Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [pmid 8175905] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence ISS]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [pmid 10867799] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [pmid 8175905] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the transfer of a phosphate group from one position to another within a single molecule [goid 16868] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [pmid 8631316] [evidence NAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 8631316] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_020992.2	ILMN_6142	PDLIM1	NM_020992.2	NM_020992.2		9124	20127594	NM_020992.2	PDLIM1	NP_066272.1	ILMN_1788955	0001410010	S	1220	ACATTGAGTCCCCTCCCTGCCTTGGTTAATTGACTCACACCAGCTGTGCG	10	-	97013625-97013674	10q23.33c	Homo sapiens PDZ and LIM domain 1 (PDLIM1), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 8522188] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CLP36; CLP-36; hCLIM1; CLIM1; ELFIN	CLP36; CLP-36; hCLIM1; CLIM1; ELFIN
Homo sapiens	RefSeq	NM_001048164.1	ILMN_182816	SLC7A3	NM_001048164.1	NM_001048164.1		84889	114326549	NM_001048164.1	SLC7A3	NP_001041629.1	ILMN_2401457	0000060278	A	1707	GTGGTCATCTGGAGACAGCCACAGAGTTCCACTCCCCTTCACTTTAAGGT	X	-	70146026-70146028:70146377-70146423	Xq13.1c	Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 (SLC7A3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IEA]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IEA]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IEA]; Catalysis of the transfer of a positively charged amino acid from one side of the membrane to the other [goid 15326] [evidence IEA]	CAT-3; ATRC3; FLJ14541; MGC20687	CAT-3; ATRC3; FLJ14541; MGC20687
Homo sapiens	RefSeq	NM_001039476.1	ILMN_42546	C16ORF35	NM_001039476.1	NM_001039476.1		8131	87116674	NM_001039476.1	C16orf35	NP_001034565.1	ILMN_2369580	0002640528	A	2656	GCTAGCTCCAGACATGGGTTGATCACCTAGAGGAGCTCTGGCTAAGGCAC	16	-	135846-135895	16p13.3f	Homo sapiens chromosome 16 open reading frame 35 (C16orf35), transcript variant 2, mRNA.				CGTHBA	CGTHBA
Homo sapiens	RefSeq	NM_206862.1	ILMN_25678	TACC2	NM_206862.2	NM_206862.2		10579	150418008	NM_206862.2	TACC2	NP_996744.2	ILMN_1686442	0003610603	I	5538	AGCAGGTACTACGAGGACATTCTCCGTTGTGGCAGGTGACTTGGTGCTGC	10	+	123836677-123836726	10q26.13a-q26.13b	Homo sapiens transforming, acidic coiled-coil containing protein 2 (TACC2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15207008] [evidence IDA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [pmid 15207008] [evidence IDA]	AZU-1; ECTACC	AZU-1; ECTACC
Homo sapiens	RefSeq	NM_001024372.1	ILMN_26379	BAALC	NM_001024372.1	NM_001024372.1		79870	66933011	NM_001024372.1	BAALC	NP_001019543.1	ILMN_1687751	0000270431	A	2316	CCTGCAAGTTCAAGGGCTCTTTCTCCCTGGGGATGTGCTTTGTGGCTTCT	8	+	104241802-104241851	8q22.3c	Homo sapiens brain and acute leukemia, cytoplasmic (BAALC), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			FLJ12015	FLJ12015
Homo sapiens	RefSeq	XM_926206.1	ILMN_34405	LOC653146	XM_926206.1	XM_926206.1		653146	89038522	XM_926206.1	LOC653146	XP_931299.1	ILMN_1656732	0002900113	S	4	CTGCGCATGCACCACGTGCTGAAGGAGGCGCTCAGCATCATCAGTGACAC	15	-	82745228-82745277	15q25.2b	PREDICTED: Homo sapiens similar to Dynamin-1 (D100) (Dynamin, brain) (B-dynamin) (LOC653146), mRNA.					
Homo sapiens	RefSeq	NM_152313.2	ILMN_13325	SLC36A4	NM_152313.2	NM_152313.2		120103	40807350	NM_152313.2	SLC36A4	NP_689526.2	ILMN_2082324	0000380484	S	2017	AGCTCTCTCCAGATCATCCCTGTGAATGCCAAAGTAAACTTTATGTACAG	11	-	92881248-92881297	11q21a	Homo sapiens solute carrier family 36 (proton/amino acid symporter), member 4 (SLC36A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	FLJ38932; PAT4	FLJ38932; PAT4
Homo sapiens	RefSeq	NM_001039616.1	ILMN_40469	SPRED3	NM_001039616.1	NM_001039616.1		399473	88853870	NM_001039616.1	SPRED3	NP_001034705.1	ILMN_2410194	0004860132	A	242	CACCACTGGAGCCTGGGTGACTGCAAGTTTGGACTGACGTTTCAGAGCCC	19	+	38882646-38882695	19q13.2a	Homo sapiens sprouty-related, EVH1 domain containing 3 (SPRED3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]		Eve-3	Eve-3
Homo sapiens	RefSeq	XM_001713782.1	ILMN_346051	LOC100133422	XM_001713782.1	XM_001713782.1		100133422	169216126	XM_001713782.1	LOC100133422	XP_001713834.1	ILMN_3244496	0007320689	S	1790	GATAGGATCTTGGCTTTGTCGCCTAGGCTAGAGTGCTGTGGGGGCAATCA					PREDICTED: Homo sapiens hypothetical protein LOC100133422 (LOC100133422), mRNA.					
Homo sapiens	RefSeq	NM_138930.2	ILMN_19433	DIABLO	NM_138930.2	NM_138930.2		56616	42544194	NM_138930.2	DIABLO	NP_620308.1	ILMN_2310589	0004890717	A	1267	ACTACTAAGAGAAGGGGTGCAGAGTGTTTACCTGGTGCTCTCAACAGGAC	12	-	121258293-121258342	12q24.31c	Homo sapiens diablo homolog (Drosophila) (DIABLO), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10929711] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11257231] [evidence EXP]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10929712] [evidence TAS];  [goid 8625] [pmid 10950947] [evidence TAS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [pmid 10929711] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15628841] [evidence IPI]	SMAC; FLJ10537; DIABLO-S; SMAC3; FLJ25049	SMAC; FLJ10537; DIABLO-S; SMAC3; FLJ25049
Homo sapiens	RefSeq	NM_138930.2	ILMN_19433	DIABLO	NM_138930.2	NM_138930.2		56616	42544194	NM_138930.2	DIABLO	NP_620308.1	ILMN_1665335	0006040537	I	117	CAGCCCCTGCAAGTAAATCCAAGAGCCTGTTACAGATTGGCGGTCGTGCC	12	-	121275170-121275219	12q24.31c	Homo sapiens diablo homolog (Drosophila) (DIABLO), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10929711] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11257231] [evidence EXP]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10929712] [evidence TAS];  [goid 8625] [pmid 10950947] [evidence TAS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [pmid 10929711] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15628841] [evidence IPI]	SMAC; FLJ10537; DIABLO-S; SMAC3; FLJ25049	SMAC; FLJ10537; DIABLO-S; SMAC3; FLJ25049
Homo sapiens	RefSeq	XM_940479.1	ILMN_171795	LOC440829	XM_496530.3	XM_496530.3		440829	113429442	XM_496530.3	LOC440829	XP_496530.3	ILMN_1672074	0001430458	A	1364	AGTTCAGTGTGAAGATGCCTGAGACCTTCAACCCGCAGCTCCCCGGCCTT	22	-	40635780-40635829	22q13.2b	PREDICTED: Homo sapiens transmembrane protein 46-like (LOC440829), mRNA.					
Homo sapiens	RefSeq	NM_181536.1	ILMN_163403	PKD1L3	XM_001134223.1	XM_001134223.1		342372	113426498	XM_001134223.1	PKD1L3	XP_001134223.1	ILMN_1702401	0000670719	S	4759	GGGACGAGGTGGTGGGCTTTCTGCTGATCATCCTAATCCTGCTGACAGGC				16q22.3a	PREDICTED: Homo sapiens polycystic kidney disease 1-like 3 (PKD1L3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Homo sapiens	RefSeq	NM_001003818.1	ILMN_17137	TRIM6-TRIM34	NM_001003819.1	NM_001003819.1		445372	51477689	NM_001003819.1	TRIM6-TRIM34	NP_001003819.1	ILMN_1683974	0004070670	I	13	CTCCTGACCTGTGGGTCCATCCGTTCAACGGCCAAAGGCTGGCGGAGGAG	11	+	5574474-5574523	11p15.4c	Homo sapiens TRIM6-TRIM34 (TRIM6-TRIM34), mRNA.				TRIM34; RNF21; IFP1	RNF89
Homo sapiens	RefSeq	NM_001003819.1	ILMN_17137	TRIM6-TRIM34	NM_001003819.1	NM_001003819.1		445372	51477689	NM_001003819.1	TRIM6-TRIM34	NP_001003819.1	ILMN_1791099	0003890538	S	103	TGCGTGGTTGAGTTTAGATAAAAGCCGAGTGAGCGCGCTCTGTTCCTTAA	11	+	5574564-5574613	11p15.4c	Homo sapiens TRIM6-TRIM34 (TRIM6-TRIM34), mRNA.				TRIM34; RNF21; IFP1	TRIM34; RNF21; IFP1
Homo sapiens	RefSeq	NM_001243.3	ILMN_21182	TNFRSF8	NM_001243.3	NM_001243.3		943	68348710	NM_001243.3	TNFRSF8	NP_001234.2	ILMN_1770711	0002120035	I	1278	GAGCTTGCTGGTGGACTCCCAGGCCAGTAAGACGCTGCCCATCCCAACCA	1	+	12106374-12106423	1p36.22a	Homo sapiens tumor necrosis factor receptor superfamily, member 8 (TNFRSF8), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10192335] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10192335] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [pmid 16108830] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 16108830] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL, TNF-related apoptosis inducing ligand [goid 45556] [pmid 16108830] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 1310894] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8627180] [evidence IPI]	CD30; KI-1; D1S166E	CD30; KI-1; D1S166E
Homo sapiens	RefSeq	XM_941559.1	ILMN_138091	FLJ34969	XM_941559.1	XM_941559.1		201627	88969082	XM_941559.1	FLJ34969	XP_946652.1	ILMN_1653615	0001980162	I	114	CTGTAAGGCAGAATGTCAAAGTTACGAAGCCCCGCCCGGACTGAGTGGGT				3p14.3a	PREDICTED: Homo sapiens hypothetical protein FLJ34969 (FLJ34969), mRNA.					
Homo sapiens	RefSeq	XM_928384.1	ILMN_35441	LOC653609	XM_928384.1	XM_928384.1		653609	88942369	XM_928384.1	LOC653609	XP_933477.1	ILMN_1704925	0003800181	S	875	ATCCTTCCCGTCTGGAGAGTCTTGACAACAGGGGTCATGCCAATTGGGAG	1	-	13045973-13046022		PREDICTED: Homo sapiens similar to PRAME family member 5 (LOC653609), mRNA.					
Homo sapiens	RefSeq	NM_198881.1	ILMN_6695	TBC1D8B	NM_198881.1	NM_198881.1		54885	38570102	NM_198881.1	TBC1D8B	NP_942582.1	ILMN_1805366	0001850594	I	2211	GGATGCCTTATTGGGCAAAGCAGAGGGTAACCAATTAGAAGGCCCTGGCT	X	+	105979339-105979388	Xq22.3b	Homo sapiens TBC1 domain family, member 8B (with GRAM domain) (TBC1D8B), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RP11-321G1.1; FLJ20298	RP11-321G1.1; FLJ20298
Homo sapiens	RefSeq	XM_371678.3	ILMN_45975	LOC389174	XM_941532.2	XM_941532.2		389174	113415362	XM_941532.2	LOC389174	XP_946625.1	ILMN_1805447	0004780603	A	682	CAGATGGTGAAGGCCAGTAGTGCCAGTGTTCAGAGGGATTTCATGGACCC				3q26.2a	PREDICTED: Homo sapiens similar to 6130401L20Rik protein (LOC389174), mRNA.					
Homo sapiens	RefSeq	NM_014982.1	ILMN_4895	PCNX	NM_014982.2	NM_014982.2		22990	126723563	NM_014982.2	PCNX	NP_055797.2	ILMN_1740010	0007050626	S	7612	AGCACCTCTCCTTTGCCCTTCACCCTGACTCCTGTCACTGTCTCCATCCC	14	+	70646545-70646594	14q24.2a	Homo sapiens pecanex homolog (Drosophila) (PCNX), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA0805; PCNXL1; KIAA0995; FLJ45663; FLJ23409	KIAA0805; PCNXL1; KIAA0995
Homo sapiens	Unigene	Hs.557622	ILMN_112913	HS.557622	Hs.557622		Hs.557622		5398642	AI812076			ILMN_1902571	0002060706	S	94	GGAGGGATGGTCAGGACAACATGGGCAGTAGGGATCGGATGGAAGGGGAA					tw46h08.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2262783 3 similar to contains PTR5.b2 PTR5 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_014656.1	ILMN_29015	KIAA0040	NM_014656.1	NM_014656.1		9674	7657258	NM_014656.1	KIAA0040	NP_055471.1	ILMN_1797191	0001990446	S	4187	GCTGTCTCACCCTTGCTTGCAAAACAGATGGCCTTGGAGACCAGACTCCC	1	-	173393073-173393122	1q25.1b	Homo sapiens KIAA0040 (KIAA0040), mRNA.					
Homo sapiens	RefSeq	NM_032981.2	ILMN_28247	DTNA	NM_032981.2	NM_032981.2		1837	42717995	NM_032981.2	DTNA	NP_116763.1	ILMN_2394777	0007320072	A	324	TGAGCTGTGCTTCCAGCCGTGAACCTTTGCACCCCATGTTCCCAGATCAG	18	+	30654796-30654830:30654831-30654845	18q12.1g	Homo sapiens dystrobrevin, alpha (DTNA), transcript variant 8, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [pmid 10767327] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10767327] [evidence TAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [pmid 9119373] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11353857] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	D18S892E; DTN; LVNC1; DRP3	D18S892E; DTN; LVNC1; DRP3
Homo sapiens	Unigene	Hs.62927	ILMN_73331	HS.62927	Hs.62927		Hs.62927		13732003	BG210316			ILMN_1829555	0004860440	S	246	GAGGAAGAGTGTGAAGGCGACTGAGCCCAGAAGAGTTGAGGCACAGGTGC	1	+	151082842-151082891		RST29852 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NR_002307.1	ILMN_20810	MSX2P1	NR_002307.1	NR_002307.1		55545	62955053	NR_002307.1	MSX2P1		ILMN_2197647	0007050735	S	559	GCGGACTTCTCCAGCTCTCCGAACCTCACGGAGACTCAGGTCAAAATCTT	17	+	53589877-53589926	17q22d	Homo sapiens msh homeobox 2 pseudogene 1 (MSX2P1), non-coding RNA.				HSHPX5; MSX2P; HPX5	MSX2P; HPX5; HSHPX5
Homo sapiens	RefSeq	NR_002307.1	ILMN_20810	MSX2P1	NR_002307.1	NR_002307.1		55545	62955053	NR_002307.1	MSX2P1		ILMN_1688723	0005130132	S	2030	CTCCCATCCCTCCAGTATGCCTTTACCCCTTTGAAAGGGTGCCTTGTACA	17	+	53591348-53591397	17q22d	Homo sapiens msh homeobox 2 pseudogene 1 (MSX2P1), non-coding RNA.				HSHPX5; MSX2P; HPX5	MSX2P; HPX5; HSHPX5
Homo sapiens	RefSeq	XM_928068.1	ILMN_163533	LOC730746	XR_015514.1	XR_015514.1		730746	113414232	XR_015514.1	LOC730746		ILMN_1679450	0002260025	S	670	TGGAGGTGGTTTTGGTGGGAATGACAACTTTGGTCATGGAGGAAACTTCA					PREDICTED: Homo sapiens similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) (LOC730746), mRNA.					
Homo sapiens	RefSeq	NM_001004707.3	ILMN_164201	OR4D2	NM_001004707.3	NM_001004707.3		124538	116063529	NM_001004707.3	OR4D2	NP_001004707.1	ILMN_2207960	0003830300	S	870	GAACCAGGACATGCAGGCAGCAGTGAGAAGATTAGGGAGACACCGGCTGG	17	+	53602885-53602934	17q22d	Homo sapiens olfactory receptor, family 4, subfamily D, member 2 (OR4D2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR17-24; BC2009	OR17-24; BC2009
Homo sapiens	RefSeq	NM_152572.2	ILMN_18587	C9ORF98	NM_152572.2	NM_152572.2		158067	31377569	NM_152572.2	C9orf98	NP_689785.1	ILMN_1659914	0006330358	S	1876	AGCTGACTTGGAGCAGTTGTATGGGTCGGCCATCACCCTCAATGGGGACC	9	-	135601145-135601194	9q34.13b	Homo sapiens chromosome 9 open reading frame 98 (C9orf98), mRNA.		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]	FLJ32704; DDX31; RP11-143F18.1; FLJ36014	FLJ32704; DDX31; RP11-143F18.1; FLJ36014
Homo sapiens	RefSeq	NM_001001667.1	ILMN_22799	OR6V1	NM_001001667.1	NM_001001667.1		346517	48717322	NM_001001667.1	OR6V1	NP_001001667.1	ILMN_1715259	0002940612	S	876	TCAGACAGTTAAAACAGTGCTACAGGGGCAGATGCAGAGGCTGAAAGGCC	7	+	142460435-142460484	7q34f	Homo sapiens olfactory receptor, family 6, subfamily V, member 1 (OR6V1), mRNA.					
Homo sapiens	Unigene	Hs.563695	ILMN_116493	HS.563695	Hs.563695		Hs.563695		11601124	BF515945			ILMN_1837979	0001440066	S	164	GAGAGAACATTCAGAGGCCCCAGCAGCAGAGGAATAACAGGCTCCAGTGG	1	+	243359432-243359481		UI-H-BW1-aoa-f-10-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3084067 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001724630.1	ILMN_339384	LOC100132716	XM_001724630.1	XM_001724630.1		100132716	169161438	XM_001724630.1	LOC100132716	XP_001724682.1	ILMN_3281023	0003940110	M	787	GTGACTGTGGGGGTGACGGGAGGCAGAGAGCTCAGGGACAGCTCAGGATA	1	-	1100820-1100869	1p36.33b	PREDICTED: Homo sapiens hypothetical protein LOC100132716, transcript variant 2 (LOC100132716), mRNA.					
Homo sapiens	RefSeq	NM_001142946.1	ILMN_369982	C11ORF21	NM_001142946.1	NM_001142946.1		29125	219273465	NM_001142946.1	C11orf21	NP_001136418.1	ILMN_3235922	0004900373	S	2168	CCTCGGTGGGTGCAGAGGTCACTTCCCTAGCCTCAGATGGGTGAGTAAAC	11	-	2317551-2317600	11p15.5a	Homo sapiens chromosome 11 open reading frame 21 (C11orf21), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NM_153340.2	ILMN_6796	ATXN7L2	NM_153340.3	NM_153340.3		127002	93277114	NM_153340.3	ATXN7L2	NP_699171.3	ILMN_1664177	0002710187	S	2169	GTCAAAAGCCCATTAACGAGAAAGTGCCTGCCCACTGCAACGGAGCCGCC	1	+	109835862-109835862:109836731-109836745:109836746-109836779	1p13.3b	Homo sapiens ataxin 7-like 2 (ATXN7L2), mRNA.				FLJ00381; MGC46534	FLJ00381; MGC46534
Homo sapiens	RefSeq	NM_203444.1	ILMN_12718	ABCB9	NM_203444.1	NM_203444.1		23457	45243523	NM_203444.1	ABCB9	NP_982269.1	ILMN_1788928	0002600315	I	369	CCGCTGGTGCTTCAATCATCCAGCCCTGTACGTTTCAGTTTGGATTTAGC	12	-	122025287-122025336	12q24.31d	Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 9 (ABCB9), transcript variant 4, mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10748049] [evidence NAS]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 10748049] [evidence NAS]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10748049] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10748049] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10748049] [evidence NAS]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	TAPL; KIAA1520; EST122234	TAPL; KIAA1520; EST122234
Homo sapiens	RefSeq	XM_936858.1	ILMN_180853	ZNF823	NM_001080493.2	NM_001080493.2		55552	130484256	NM_001080493.2	ZNF823	NP_001073962.1	ILMN_1669064	0004920747	A	2103	ATTGCAGGGGATTGGTTCCAGCACCCTCTAAATCCACAGATGCCAAGTCC	19	-	11832322-11832371	19p13.2a	Homo sapiens zinc finger protein 823 (ZNF823), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSZFP36	
Homo sapiens	RefSeq	NM_052947.2	ILMN_30352	ALPK2	NM_052947.3	NM_052947.3		115701	148596991	NM_052947.3	ALPK2	NP_443179.3	ILMN_1811238	0005270519	S	7185	CCACTGGTGTCTAATACGCTATTGTTGCCGGAGGTGGGTTCTGTGACGTG	18	-	56148547-56148596	18q21.31b-q21.32a	Homo sapiens alpha-kinase 2 (ALPK2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ43253; HAK; FLJ34875	
Homo sapiens	RefSeq	XM_001719238.1	ILMN_346678	LOC100131769	XM_001719238.1	XM_001719238.1		100131769	169217750	XM_001719238.1	LOC100131769	XP_001719290.1	ILMN_3244949	0001110148	S	752	GCCTGTATCAAGAACATCTTCGGGGACATGCTGTGTCCTCGTGGGGTGCC					PREDICTED: Homo sapiens similar to phosphatidylinositol-specific phospholipase C, X domain containing 1 (LOC100131769), mRNA.					
Homo sapiens	RefSeq	XM_944656.1	ILMN_46826	LOC651410	XM_944656.1	XM_944656.1		651410	88968981	XM_944656.1	LOC651410	XP_949749.1	ILMN_1782800	0004010379	S	536	TGCTGACCCTCATGGACCGAGATTACAGGCAAGTTCCCTCAGACCTAGGC					PREDICTED: Homo sapiens hypothetical protein LOC651410 (LOC651410), mRNA.					
Homo sapiens	RefSeq	XM_497642.2	ILMN_31061	LOC441864	XM_497642.2	XM_497642.2		441864	89056937	XM_497642.2	LOC441864	XP_497642.2	ILMN_1683604	0007560170	S	243	GGGTCTGGCTGCCGTAATTGTGGTTATCATGGGAGCTTTCCTGGTGGAGG	19	-	59265124-59265173	19q13.42a	PREDICTED: Homo sapiens similar to osteoclast-associated receptor isoform 5 (LOC441864), mRNA.					
Homo sapiens	RefSeq	NM_145010.2	ILMN_8823	ENKUR	NM_145010.2	NM_145010.2		219670	24432063	NM_145010.2	ENKUR	NP_659447.1	ILMN_1735292	0004880022	S	2583	CCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAA	10	-	25311608-25311657	10p12.1c	Homo sapiens enkurin, TRPC channel interacting protein (ENKUR), mRNA.				DKFZp781F21103; MGC26778	DKFZp781F21103; MGC26778
Homo sapiens	RefSeq	NM_145010.2	ILMN_8823	ENKUR	NM_145010.2	NM_145010.2		219670	24432063	NM_145010.2	ENKUR	NP_659447.1	ILMN_2097164	0001940112	S	2978	GACCTCTGAGATCTGCACACATGGTTCCCTCCACCCAGAAAACTGCCCTT	10	-	25311213-25311262	10p12.1c	Homo sapiens enkurin, TRPC channel interacting protein (ENKUR), mRNA.				DKFZp781F21103; MGC26778	DKFZp781F21103; MGC26778
Homo sapiens	Unigene	Hs.539849	ILMN_104784	HS.539849	Hs.539849		Hs.539849		34532456	AK126091			ILMN_1910322	0005270221	S	2929	CATCCTGGCAGAGGCACCAGGCAGTGAGGACAATGAGGGCTGGATATGGA	14	-	103893298-103893347		Homo sapiens cDNA FLJ44103 fis, clone TESTI4044084					
Homo sapiens	Unigene	Hs.543054	ILMN_106725	HS.543054	Hs.543054		Hs.543054		3308629	AI052638			ILMN_1821712	0007320754	S	315	GTGAGTAATTTTTAGGGTAAGGGCCTTGGTACCAGTGACAAGGTAAAAGG	3	-	99400765-99400812:99400814-99400815		oz18a05.x1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:1675664 3 similar to contains element MER36 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	XM_001714899.1	ILMN_350252	LOC100131988	XM_001714899.1	XM_001714899.1		100131988	169205007	XM_001714899.1	LOC100131988	XP_001714951.1	ILMN_3216811	0005220156	A	23	ACAAGTCAGTGACTGGCACAGTGAAAACAGAGCAGCAGGGGCAGTCGCCC				12q24.31a	PREDICTED: Homo sapiens hypothetical LOC100131988 (LOC100131988), mRNA.					
Homo sapiens	RefSeq	NM_020320.2	ILMN_7562	RARS2	NM_020320.2	NM_020320.2		57038	24475643	NM_020320.2	RARS2	NP_064716.1	ILMN_1758214	0000730487	S	1407	AGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTC	6	-	88285071-88285120	6q15a	Homo sapiens arginyl-tRNA synthetase 2, mitochondrial (RARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]; The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]; The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	dJ382I10.6; DALRD2; MGC14993; PCH6; PRO1992; RARSL; MGC23778	dJ382I10.6; DALRD2; MGC14993; PCH6; PRO1992; RARSL; MGC23778
Homo sapiens	RefSeq	NM_025236.2	ILMN_24646	RNF39	NM_170769.1	NM_170769.1		80352	25777715	NM_170769.1	RNF39	NP_739575.1	ILMN_1730223	0001980255	A	1796	TCCCCTCTCTCCTCCTCAACCTGGGAATACTTCAGACATCTCCAAACTCA	6	-	30146148-30146197	6p21.33b	Homo sapiens ring finger protein 39 (RNF39), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HZF; HZFW; LIRF; HZFw1	HZF; HZFW; LIRF; HZFw1
Homo sapiens	RefSeq	NM_024068.2	ILMN_20552	OBFC2B	NM_024068.2	NM_024068.2		79035	34147355	NM_024068.2	OBFC2B	NP_076973.1	ILMN_1704672	0000270196	S	916	TCTCATACTCCCTCATTGTCCAGCTGAACTACCTGTCCCCTGGGAGTCAG	12	+	54909410-54909459	12q13.2c	Homo sapiens oligonucleotide/oligosaccharide-binding fold containing 2B (OBFC2B), mRNA.				MGC2731	MGC2731
Homo sapiens	RefSeq	XM_943115.1	ILMN_38656	LOC647920	XM_943115.1	XM_943115.1		647920	89059373	XM_943115.1	LOC647920	XP_948208.1	ILMN_1740088	0005870246	S	779	ACTGTGCTGCTTTTCCGGTGGCTCCTGCTCCTCCCGGCCCCATCACCACT					PREDICTED: Homo sapiens hypothetical protein LOC647920 (LOC647920), mRNA.					
Homo sapiens	RefSeq	NM_000600.1	ILMN_6469	IL6	NM_000600.1	NM_000600.1		3569	10834983	NM_000600.1	IL6	NP_000591.1	ILMN_1699651	0004040576	S	667	TGCAGTCCAGCCTGAGGGCTCTTCGGCAAATGTAGCATGGGCACCTCAGA	7	+	22737683-22737717:22737718-22737732	7p15.3c	Homo sapiens interleukin 6 (interferon, beta 2) (IL6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1883960] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10925276] [evidence TAS]	The process of apoptosis in neutrophils [goid 1781] [pmid 7595060] [evidence IDA]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10443688] [evidence IDA]; An immune response mediated through a body fluid [goid 6959] [pmid 2829354] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10925276] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 1883960] [evidence NAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 2829354] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 3023045] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [pmid 7508917] [evidence IDA]; Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism [goid 42832] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 7595060] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [pmid 7508917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45079] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation [goid 45630] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 45727] [pmid 16732314] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 7508917] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46888] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [pmid 7508917] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [pmid 10443688] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-6 receptor [goid 5138] [pmid 1883960] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	IL-6; HSF; BSF2; IFNB2; HGF	HSF; HGF; IL-6; BSF2; IFNB2
Homo sapiens	RefSeq	XR_036893.1	ILMN_350877	LOC727755	XR_036893.1	XR_036893.1		727755	169202324	XR_036893.1	LOC727755		ILMN_3248060	0007150129	S	2833	TACTCTCAGCTTCACGTGACTCTCGGGCAGAAGCAGTGGTGGGGCAGCCA	11	-	115602-115651	11p15.5d	PREDICTED: Homo sapiens misc_RNA (LOC727755), miscRNA.					
Homo sapiens	RefSeq	XM_940324.1	ILMN_30812	LOC651197	XM_940324.1	XM_940324.1		651197	89061901	XM_940324.1	LOC651197	XP_945417.1	ILMN_1686709	0004880400	S	184	CATGGGAGACAGTGCAGGGTGGGAATAAGGGGAGGCCAGCGTCTCTCCCT					PREDICTED: Homo sapiens hypothetical protein LOC651197 (LOC651197), mRNA.					
Homo sapiens	RefSeq	XM_942013.1	ILMN_42851	LOC652529	XM_942013.1	XM_942013.1		652529	89071658	XM_942013.1	LOC652529	XP_947106.1	ILMN_1755526	0004260563	S	28	GCCTTAGCTATGCTTCTCCTCCCAGAAGCTCCTCTCCAAGAAGATCCAAG					PREDICTED: Homo sapiens hypothetical protein LOC652529 (LOC652529), mRNA.					
Homo sapiens	RefSeq	NM_153252.2	ILMN_6030	BRWD3	NM_153252.3	NM_153252.3		254065	153791629	NM_153252.3	BRWD3	NP_694984.3	ILMN_1757794	0004050653	S	5610	GGCAGAGTGCGTAAAATGACAGAAAAAGCCAGGGTTAGCCATCTCATGGG	X	-	79932813-79932862	Xq21.1c	Homo sapiens bromodomain and WD repeat domain containing 3 (BRWD3), mRNA.				BRODL; MRX93; FLJ38568	BRODL; FLJ38568
Homo sapiens	RefSeq	XM_001723707.1	ILMN_337383	LOC100128559	XM_001723707.1	XM_001723707.1		100128559	169211168	XM_001723707.1	LOC100128559	XP_001723759.1	ILMN_3179304	0004250615	A	2108	GCTGTAGGGTTGTCTTTACGCCCTTTTGTGTTGAGGCATATGTTTTCCAC	17	+	21738422-21738471	17p11.2a	PREDICTED: Homo sapiens hypothetical LOC100128559 (LOC100128559), mRNA.					
Homo sapiens	RefSeq	XM_001723707.1	ILMN_337383	LOC100128559	XM_001723707.1	XM_001723707.1		100128559	169211168	XM_001723707.1	LOC100128559	XP_001723759.1	ILMN_3255765	0004040537	M	2285	GCCTTACCTGCACCCCCATGTTTATTACAGCACTATTCACAATAGCCAAG	17	+	21738599-21738648	17p11.2a	PREDICTED: Homo sapiens hypothetical LOC100128559 (LOC100128559), mRNA.					
Homo sapiens	RefSeq	NM_001007530.1	ILMN_10456	CDRT15	NM_001007530.1	NM_001007530.1		146822	56090617	NM_001007530.1	CDRT15	NP_001007531.1	ILMN_1681943	0000940050	S	268	GGTCCATGTGCAGAAGTAAGAGCACTGCCAGCACCAGCGGCGGAGCCAGA	17	-	14139692-14139741	17p12b	Homo sapiens CMT1A duplicated region transcript 15 (CDRT15), mRNA.					
Homo sapiens	RefSeq	NM_017567.2	ILMN_4544	NAGK	NM_017567.2	NM_017567.2		55577	49574507	NM_017567.2	NAGK	NP_060037.2	ILMN_1716547	0003450326	S	1370	GCCATTGCCTTCTATTCCTACACCTTTTCCTAGGGGGCTGGTCCCGGCTC	2	+	71159114-71159146:71159147-71159163	2p13.3c	Homo sapiens N-acetylglucosamine kinase (NAGK), mRNA.		The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [pmid 10824116] [evidence TAS]; The chemical reactions and pathways involving N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose [goid 6051] [pmid 10824116] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + N-acetyl-D-glucosamine = ADP + N-acetyl-D-glucosamine 6-phosphate [goid 45127] [evidence IEA]	GNK; HSA242910	GNK; HSA242910
Homo sapiens	RefSeq	NM_206919.1	ILMN_25508	ARL9	NM_206919.1	NM_206919.1		132946	51011132	NM_206919.1	ARL9	NP_996802.1	ILMN_1777691	0006350066	S	760	ACCCTCCACCATGCAAGATGCCAAAGACTTGATTGCACAGCTGGCTGCAG	4	+	57084739-57084788	4q12e	Homo sapiens ADP-ribosylation factor-like 9 (ARL9), mRNA.		Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	XM_940046.1	ILMN_34787	LOC650950	XM_940046.1	XM_940046.1		650950	89037625	XM_940046.1	LOC650950	XP_945139.1	ILMN_1767184	0004780037	S	1001	CAAGGCAACAAGTGACAAGGCAAGATGAGTGGGGACAACTGCTTCTCACC					PREDICTED: Homo sapiens similar to Y43F4A.1a (LOC650950), mRNA.					
Homo sapiens	RefSeq	XM_941916.1	ILMN_33215	LOC652463	XM_941916.1	XM_941916.1		652463	89062823	XM_941916.1	LOC652463	XP_947009.1	ILMN_1678559	0002230672	S	35	TGAATCTACACATCCAAGGAGCTCAACGAATTCCAAGCAGGCTATACGCC					PREDICTED: Homo sapiens hypothetical protein LOC652463 (LOC652463), mRNA.					
Homo sapiens	RefSeq	NM_006090.3	ILMN_14637	CEPT1	NM_006090.3	NM_006090.3		10390	56119170	NM_006090.3	CEPT1	NP_006081.1	ILMN_2356838	0005870403	A	1846	GGAATTCAGCTTGTGACACAGATACATCCCACTAGCTTGTGAGGTGGAAC	1	+	111528880-111528929	1p13.3a	Homo sapiens choline/ethanolamine phosphotransferase 1 (CEPT1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10191259] [evidence TAS]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10191259] [evidence TAS]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine [goid 4142] [evidence IEA]; Catalysis of the reaction: CDP-ethanolamine + 1,2-diacylglycerol = CMP + a phosphatidylethanolamine [goid 4307] [pmid 10191259] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	MGC45223; DKFZp313G0615	MGC45223; DKFZp313G0615
Homo sapiens	RefSeq	NM_006090.3	ILMN_14637	CEPT1	NM_006090.3	NM_006090.3		10390	56119170	NM_006090.3	CEPT1	NP_006081.1	ILMN_2266309	0006350474	I	42	CCCAGTCGGCTGGAGTCGGAGGCGATATTTCTAGGGGTGTACTTGTTGGG	1	+	111484397-111484446	1p13.3a	Homo sapiens choline/ethanolamine phosphotransferase 1 (CEPT1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10191259] [evidence TAS]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10191259] [evidence TAS]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: CDP-choline + 1,2-diacylglycerol = CMP + a phosphatidylcholine [goid 4142] [evidence IEA]; Catalysis of the reaction: CDP-ethanolamine + 1,2-diacylglycerol = CMP + a phosphatidylethanolamine [goid 4307] [pmid 10191259] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	MGC45223; DKFZp313G0615	MGC45223; DKFZp313G0615
Homo sapiens	RefSeq	NM_005531.1	ILMN_2725	IFI16	NM_005531.1	NM_005531.1		3428	5031778	NM_005531.1	IFI16	NP_005522.1	ILMN_1710937	0003870594	S	2032	CCTTTCACACTTGTGGCTGATGTGAATGCTGACCGAAACATGGAGATCCC	1	+	157288195-157288244	1q23.1g	Homo sapiens interferon, gamma-inducible protein 16 (IFI16), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7536752] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 14654789] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 14654789] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9766636] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence NAS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [pmid 7536752] [evidence NAS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [pmid 9766636] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [pmid 14654789] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 7536752] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14654789] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 9642285] [evidence IDA]	IFNGIP1; PYHIN2	IFNGIP1; PYHIN2
Homo sapiens	RefSeq	XM_498623.2	ILMN_39060	LOC440309	XM_498623.2	XM_498623.2		440309	89038669	XM_498623.2	LOC440309	XP_498623.2	ILMN_1686160	0002370379	S	1	ATGTTCCCTAAATTTCTAGGTTGCACGTGCCTAAATGCTGATGTGAGTGG	15	+	91221087-91221136		PREDICTED: Homo sapiens hypothetical LOC440309 (LOC440309), mRNA.					
Homo sapiens	RefSeq	XM_001723019.1	ILMN_338653	LOC100130673	XM_001723019.1	XM_001723019.1		100130673	169171356	XM_001723019.1	LOC100130673	XP_001723071.1	ILMN_3180780	0004880427	A	116	CTCCAGCTATGTCCAATATGGTGCTGCTTGGCAGCAGCTCACTGGGACTT				7p14.3c	PREDICTED: Homo sapiens similar to hCG1804306 (LOC100130673), mRNA.					
Homo sapiens	RefSeq	NM_000143.2	ILMN_5911	FH	NM_000143.2	NM_000143.2		2271	19743874	NM_000143.2	FH	NP_000134.2	ILMN_1719392	0001780348	S	1515	GAGCAGTTTGACGAATGGGTAAAACCTAAGGACATGCTGGGTCCAAAGTG	1	-	241661128-241661177	1q43e	Homo sapiens fumarate hydratase (FH), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8200987] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8200987] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8200987] [evidence EXP]; Any of the heteromeric enzymes that act in the TCA cycle [goid 45239] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving fumarate, the anion of trans-1,2-ethenedicarboxylic acid, the diastereoisomer of maleate. It is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate [goid 6106] [pmid 8200987] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any biological process involved in the maintenance of the equilibrium of cell number within a population of cells in a tissue [goid 48873] [evidence IEA]	Catalysis of the reaction: (S)-malate = fumarate + H2O [goid 4333] [pmid 8200987] [evidence EXP]; Catalysis of the reaction: (S)-malate = fumarate + H2O [goid 4333] [pmid 3828494] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	MCUL1; MCL; HLRCC; LRCC	MCUL1; MCL; HLRCC; LRCC
Homo sapiens	RefSeq	NM_006863.1	ILMN_2616	LILRA1	NM_006863.1	NM_006863.1		11024	5803065	NM_006863.1	LILRA1	NP_006854.1	ILMN_1734748	0003780093	S	1500	GCTAACACCCTCAGCCCATCACAAAACAAGACTGCCTCACACCCCCAGGA	19	+	55111982-55112015:55112164-55112179	19q13.42a	Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1 (LILRA1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15304001] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 9548455] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9548455] [evidence TAS]	Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 9548455] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9548455] [evidence TAS]	MGC126563; LIR-6; CD85I; LIR6	LIR-6; CD85I; LIR6; MGC126563
Homo sapiens	RefSeq	NM_001037231.1	ILMN_1408	LOC285735	NM_001037231.1	NM_001037231.1		285735	82524339	NM_001037231.1	LOC285735	NP_001032308.1	ILMN_2176625	0003310482	S	226	GCAGAACACTCAACCTGAAAGCAGAATGGATTGAGTCACTGCAGCGTGGC	6	+	133469047-133469096	6q23.2c	Homo sapiens hypothetical protein LOC285735 (LOC285735), mRNA.				MGC126751; MGC126753	MGC126751; MGC126753
Homo sapiens	RefSeq	NM_006826.2	ILMN_180754	YWHAQ	NM_006826.2	NM_006826.2		10971	21464103	NM_006826.2	YWHAQ	NP_006817.1	ILMN_1674385	0003850131	S	1698	CATGCAGATTTGTGCACATGTGAGAGGGTGTCCAGTTTGTCTAGTGATTG	2	-	9724524-9724573	2p25.1d	Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide (YWHAQ), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 15163635] [evidence IDA]	Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11984006] [evidence IPI]	HS1; 14-3-3; 1C5	1C5; HS1; 14-3-3
Homo sapiens	Unigene	Hs.46506	ILMN_72746	HS.46506	Hs.46506		Hs.46506		21754600	AK095358			ILMN_1880425	0002630372	S	2460	CCCACATTAGTGCCTGCCCACTGCTCTACTTCTAACCAGGGACACGGATC	13	+	51238438-51238487		Homo sapiens cDNA FLJ38039 fis, clone CTONG2013934					
Homo sapiens	Unigene	Hs.377257	ILMN_88614	HS.377257	Hs.377257		Hs.377257		50504958	CR624151			ILMN_1823112	0004250730	S	1773	TGCCATCTGGAATGGAGCAATGTCTGTAGTTTTGTAGCCCAAGATTCCTC	2	+	178711472-178711521		full-length cDNA clone CS0DF009YJ16 of Fetal brain of Homo sapiens (human)					
Homo sapiens	RefSeq	NM_001086521.1	ILMN_309134	C17ORF89	NM_001086521.1	NM_001086521.1		284184	147900222	NM_001086521.1	C17orf89	NP_001079990.1	ILMN_3245824	0000780053	S	3	AAGAGGACGGACCTAAGATGGCGGCCTCCAGGGGGCTGGGAATAGCCGCT	17	+	76827708-76827757	17q25.3f	Homo sapiens chromosome 17 open reading frame 89 (C17orf89), mRNA.					
Homo sapiens	RefSeq	NM_004616.2	ILMN_578	TSPAN8	NM_004616.2	NM_004616.2		7103	21265107	NM_004616.2	TSPAN8	NP_004607.1	ILMN_1683263	0004560543	S	835	TTGAGATACTGGGTTTGGTGTTTTCTATGGTCCTGTATTGCCAGATCGGG	12	-	71519122-71519167:71523111-71523114	12q21.1a	Homo sapiens tetraspanin 8 (TSPAN8), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 8661157] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 2395876] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 2395876] [evidence TAS]	CO-029; TM4SF3	CO-029; TM4SF3
Homo sapiens	RefSeq	NM_002426.2	ILMN_176589	MMP12	NM_002426.2	NM_002426.2		4321	73858571	NM_002426.2	MMP12	NP_002417.2	ILMN_2073758	0004760626	S	1701	TCTATTTGAAGCATGCTCTGTAAGTTGCTTCCTAACATCCTTGGACTGAG	11	-	102238747-102238796	11q22.2b	Homo sapiens matrix metallopeptidase 12 (macrophage elastase) (MMP12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8226919] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 8226919] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8226919] [evidence TAS]	MGC138506; MME; HME	MGC138506; MME; HME
Homo sapiens	RefSeq	XM_925785.1	ILMN_38030	LOC641699	XM_925785.1	XM_925785.1		641699	88978213	XM_925785.1	LOC641699	XP_930878.1	ILMN_1771747	0004590201	S	911	CCAATGGCTCCTGCTACACATCTAGGGTATATGATACAGCCAATGGCAGG	4	-	168551600-168551649		PREDICTED: Homo sapiens similar to retrotransposon gag domain containing 1 (LOC641699), mRNA.					
Homo sapiens	RefSeq	XM_371923.2	ILMN_38284	LOC389523	XM_371923.2	XM_371923.2		389523	89025145	XM_371923.2	LOC389523	XP_371923.2	ILMN_1698757	0002360114	A	98	CCCATCACCCCCTCTCCACCAAACACAGCACCGTGGGGGCTTTCACGCTT	7	+	74016611-74016628:74016747-74016778	7q11.23c	PREDICTED: Homo sapiens similar to opposite strand transcription unit to Stag3 (LOC389523), mRNA.					
Homo sapiens	RefSeq	NM_016508.2	ILMN_15037	CDKL3	NM_016508.2	NM_016508.2		51265	17017984	NM_016508.2	CDKL3	NP_057592.1	ILMN_2217630	0003610156	S	1264	CCACATTGCGGAGGTTCTGTGACAATGCCACCCATCAATCTAACTAACAG	5	-	133671778-133671827	5q31.1d	Homo sapiens cyclin-dependent kinase-like 3 (CDKL3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10463609] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NKIAMRE	NKIAMRE
Homo sapiens	RefSeq	NM_016508.2	ILMN_15037	CDKL3	NM_016508.2	NM_016508.2		51265	17017984	NM_016508.2	CDKL3	NP_057592.1	ILMN_1770690	0001240471	S	686	CCAAGAGCCCCATTTTTGCTGGGGTAGTTCTTCCTCAAGTTCAACACCCC	5	-	133683004-133683053	5q31.1d	Homo sapiens cyclin-dependent kinase-like 3 (CDKL3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10463609] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NKIAMRE	NKIAMRE
Homo sapiens	RefSeq	NM_178423.1	ILMN_7986	HDAC9	NM_178425.2	NM_178425.2		9734	116284377	NM_178425.2	HDAC9	NP_848512.1	ILMN_1673708	0003130112	I	3989	GCAATGTTGCAATTGTGTTGGAGAATGAAGTCCCCCCACCTCCCAGCCAC	7	+	18767335-18767380:18768305-18768308	7p21.1a	Homo sapiens histone deacetylase 9 (HDAC9), transcript variant 5, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12711221] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [pmid 10523670] [evidence NAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12711221] [evidence TAS]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 10523670] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp779K1053; HDAC; HDAC9FL; MITR; HD7; HDRP; HDAC9B; KIAA0744; HDAC7B; HDAC7	DKFZp779K1053; HDAC; HDAC9FL; MITR; HD7; HDRP; HDAC9B; KIAA0744; HDAC7B; HDAC7
Homo sapiens	RefSeq	NM_058177.1	ILMN_7986	HDAC9	NM_178425.2	NM_178425.2		9734	116284377	NM_178425.2	HDAC9	NP_848512.1	ILMN_1803563	0007150068	A	1678	GGGCTGTGAAGGTCAAGGAGGAACCAGTGGACAGTGATGAAGATGCTCAG	7	+	18650838-18650887	7p21.1a	Homo sapiens histone deacetylase 9 (HDAC9), transcript variant 5, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12711221] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [pmid 10523670] [evidence NAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12711221] [evidence TAS]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 10523670] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp779K1053; HDAC; HDAC9FL; MITR; HD7; HDRP; HDAC9B; KIAA0744; HDAC7B; HDAC7	DKFZp779K1053; HDAC; HDAC9FL; MITR; HD7; HDRP; HDAC9B; KIAA0744; HDAC7B; HDAC7
Homo sapiens	RefSeq	XR_039163.1	ILMN_343737	LOC729435	XR_039163.1	XR_039163.1		729435	169204822	XR_039163.1	LOC729435		ILMN_3302054	0006840762	M	609	TAGTCCAGCAGATGATGCCAGAAGTCGGGGGGCTTGTTCAGGGCAAATGC				12q14.2b	PREDICTED: Homo sapiens misc_RNA (LOC729435), miscRNA.					
Homo sapiens	Unigene	Hs.570291	ILMN_122472	HS.570291	Hs.570291		Hs.570291		76555467	DV080354			ILMN_1860308	0003780209	S	99	TGGGATTGTAGTTCTGGAAGCCACTGGATAAGAAGCAAGAGAGGTTGGAC	2	-	203680622-203680671		MGC9.6.1.1.1.B04.R.1 NIH_MGC_331 Homo sapiens cDNA clone MGC9.6.1.1.1.B04, mRNA sequence					
Homo sapiens	RefSeq	NM_017996.2	ILMN_164954	DET1	NM_017996.2	NM_017996.2		55070	33354282	NM_017996.2	DET1	NP_060466.2	ILMN_1661653	0006650452	S	1718	CCCCATCAACCACACAGTGCGACGCCTTGTTGCCTTCACCTTTCACCCTT	15	-	86857265-86857314	15q25.3d	Homo sapiens de-etiolated homolog 1 (Arabidopsis) (DET1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FLJ10103; MGC126157; MGC126156	FLJ10103; MGC126157; MGC126156
Homo sapiens	RefSeq	NM_017996.2	ILMN_164954	DET1	NM_017996.2	NM_017996.2		55070	33354282	NM_017996.2	DET1	NP_060466.2	ILMN_2145423	0003990605	S	1938	GCTCTGTTAGTTCCAGCCTGCTATACCTCAGATGGGAGAGAGCCAGAGAG	15	-	86857045-86857094	15q25.3d	Homo sapiens de-etiolated homolog 1 (Arabidopsis) (DET1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FLJ10103; MGC126157; MGC126156	FLJ10103; MGC126157; MGC126156
Homo sapiens	RefSeq	NM_006656.4	ILMN_11997	NEU3	NM_006656.4	NM_006656.4		10825	21704286	NM_006656.4	NEU3	NP_006647.2	ILMN_1740524	0005910192	S	3373	GGATATTGTCCTGGCCCAGCTACTCCTTTACCTGTGAGAAGATCTTCACC	11	+	74396245-74396294	11q13.4c	Homo sapiens sialidase 3 (membrane sialidase) (NEU3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12730204] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10405317] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 12730204] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of ganglioside, a ceramide oligosaccharide carrying, in addition to other sugar residues, one or more sialic residues [goid 6689] [pmid 10405317] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates [goid 4308] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	SIAL3	SIAL3
Homo sapiens	RefSeq	NM_019080.1	ILMN_23410	NDFIP2	NM_019080.1	NM_019080.1		54602	55741474	NM_019080.1	NDFIP2	NP_061953.1	ILMN_1677396	0001030364	S	2239	TGGCATATAGGACTGTGGGGTCTGTGTGTGTAGTGAGAGTGTGTAGCCAC	13	+	79025825-79025874	13q31.1a	Homo sapiens Nedd4 family interacting protein 2 (NDFIP2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	FLJ25842; N4wbp5a; KIAA1165	FLJ25842; N4wbp5a; KIAA1165
Homo sapiens	Unigene	Hs.527876	ILMN_100956	HS.527876	Hs.527876		Hs.527876		14000636	BG721449			ILMN_1854109	0002480609	S	290	CACAGTGGGAACCTCCAAGGAACTAACATCTAGCTGGGGATGAGGGGGGA	12	+	76701407-76701456		602695014F1 NIH_MGC_97 Homo sapiens cDNA clone IMAGE:4827386 5, mRNA sequence					
Homo sapiens	RefSeq	NM_017576.1	ILMN_15132	KIF27	NM_017576.1	NM_017576.1		55582	30794487	NM_017576.1	KIF27	NP_060046.1	ILMN_2366795	0002000725	A	4263	GCGACGTTCCAGTCTTGGAGTTGGCATTGGATCAATGGCTGCTGATTCCA	9	-	86451953-86452002	9q21.32c	Homo sapiens kinesin family member 27 (KIF27), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DKFZp434D0917; RP11-575L7.3	DKFZp434D0917; RP11-575L7.3
Homo sapiens	RefSeq	NM_017576.1	ILMN_15132	KIF27	NM_017576.1	NM_017576.1		55582	30794487	NM_017576.1	KIF27	NP_060046.1	ILMN_1747353	0002120176	I	2727	AGAAAATGAAAAAAGGAAGCAACTGGATGCAGTAATTAAGCGGGACCAGC	9	-	86495222-86495271	9q21.32c	Homo sapiens kinesin family member 27 (KIF27), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DKFZp434D0917; RP11-575L7.3	DKFZp434D0917; RP11-575L7.3
Homo sapiens	RefSeq	XM_941243.1	ILMN_33687	FAM91A2	XM_941243.1	XM_941243.1		57234	89067029	XM_941243.1	FAM91A2	XP_946336.1	ILMN_1748976	0005690296	I	441	CTTATCAGAACGGAGTGGATGGTCACCTTCCTCACTTATTGCTAATCTCC				1q21.1e	PREDICTED: Homo sapiens family with sequence similarity 91, member A2, transcript variant 7 (FAM91A2), mRNA.					
Homo sapiens	RefSeq	XM_927687.1	ILMN_35593	LOC644573	XM_927687.1	XM_927687.1		644573	89031591	XM_927687.1	LOC644573	XP_932780.1	ILMN_1773530	0007610437	S	210	CAGTGGCTTGTTGGCTAAGTGGAAGACGGATGAGAAGCATGGAAAAACTG	10	-	101893604-101893653	10q24.2c	PREDICTED: Homo sapiens similar to cytochrome P450, family 2, subfamily c, polypeptide 44 isoform 1 (LOC644573), mRNA.					
Homo sapiens	RefSeq	NM_020922.2	ILMN_165410	WNK3	NM_020922.2	NM_020922.2		65267	50845417	NM_020922.2	WNK3	NP_065973.2	ILMN_1756367	0002190431	I	4242	CCTGGACTCGCAAATTAAAAAGCTGGGCATACAGGCTACGGCAGTCAACC	X	-	54282056-54282105	Xp11.22a	Homo sapiens WNK lysine deficient protein kinase 3 (WNK3), transcript variant 1, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16501604] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	KIAA1566; PRKWNK3	KIAA1566; PRKWNK3
Homo sapiens	RefSeq	NM_053043.1	ILMN_25238	PRR8	NM_053043.1	NM_053043.1		92454	16596683	NM_053043.1	PRR8	NP_444271.1	ILMN_1741244	0004490332	S	4199	CCCACATCAGCTCCAAGGTCAGGGTGATTAAGCTGTCAGGTGGGGTAAGT	7	+	155231014-155231063	7q36.3a	Homo sapiens proline rich 8 (PRR8), mRNA.				MGC20460	MGC20460
Homo sapiens	RefSeq	XM_939115.1	ILMN_18892	MGC4677	NM_052871.3	NM_052871.3		112597	62243377	NM_052871.3	MGC4677	NP_443103.1	ILMN_1665515	0003130075	A	187	TAACTGGGAGATGAAACAGGAAGCTCTATGACACACTTGATCGAATATGA	2	+	87601843-87601888:87601889-87601892	2p11.2d	Homo sapiens hypothetical protein MGC4677 (MGC4677), mRNA.				MGC17532; MGC88182	
Homo sapiens	RefSeq	NM_052871.3	ILMN_18892	MGC4677	NM_052871.3	NM_052871.3		112597	62243377	NM_052871.3	MGC4677	NP_443103.1	ILMN_2143795	0006350189	S	360	GGCCTCTGCATTTGCGGGTGGTCTGCCTGTGATATTTTGGTCATGGGCTG	2	+	87602016-87602047:87602048-87602065	2p11.2d	Homo sapiens hypothetical protein MGC4677 (MGC4677), mRNA.				MGC17532; MGC88182	MGC17532; MGC88182
Homo sapiens	RefSeq	NM_005477.1	ILMN_11526	HCN4	NM_005477.1	NM_005477.1		10021	4885406	NM_005477.1	HCN4	NP_005468.1	ILMN_1790810	0000380626	S	4969	TCTCTCCCCATCTCTGGTCTCAAAGCCAGTCCCAGCCTGACCTCTCACCA	15	-	71401034-71401083	15q24.1a	Homo sapiens hyperpolarization activated cyclic nucleotide-gated potassium channel 4 (HCN4), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [pmid 10228147] [evidence TAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 10228147] [evidence TAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 10228147] [evidence NAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts [goid 5222] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Homo sapiens	RefSeq	NM_000415.1	ILMN_30144	IAPP	NM_000415.1	NM_000415.1		3375	4557654	NM_000415.1	IAPP	NP_000406.1	ILMN_1679527	0000290717	S	1280	CTGCTTTGTATCCATGAGGGTTTCATTGTGTGTTAGCAGCAGTGAGCTTC	12	+	21423501-21423550	12p12.1e	Homo sapiens islet amyloid polypeptide (IAPP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 2608057] [evidence TAS]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 8152488] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10342886] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2608057] [evidence TAS]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	IAP; DAP; AMYLIN	IAP; DAP; AMYLIN
Homo sapiens	RefSeq	NM_001417.2	ILMN_21177	EIF4B	NM_001417.4	NM_001417.4		1975	148746207	NM_001417.4	EIF4B	NP_001408.2	ILMN_1655497	0005390494	S	3521	GATTAGGCCCTGTTCAGCCATGCAGGGGTGTTGGTTTATGCGTGCTGCAG	12	+	51721753-51721802	12q13.13e	Homo sapiens eukaryotic translation initiation factor 4B (EIF4B), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15314020] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome [goid 16281] [pmid 2390971] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 2390971] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2390971] [evidence TAS]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 2390971] [evidence TAS]	EIF-4B; PRO1843	EIF-4B
Homo sapiens	RefSeq	NM_004424.3	ILMN_23848	E4F1	NM_004424.3	NM_004424.3		1877	69885083	NM_004424.3	E4F1	NP_004415.2	ILMN_1720287	0003390068	S	2479	CTGGTAGAGAAGATGGCACAGGATGGAGGCGCCCCAAGACGGACAGTGTA	16	+	2225650-2225699	16p13.3d	Homo sapiens E4F transcription factor 1 (E4F1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10869426] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that modulates the frequency, rate or extent of replication and segregation of genetic material in the embryo [goid 9794] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9121437] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10869426] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9121437] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10869426] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14729613] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC99614; E4F	MGC99614; E4F
Homo sapiens	RefSeq	XM_293565.6	ILMN_46563	LOC441582	XM_293565.6	XM_293565.6		441582	88965756	XM_293565.6	LOC441582	XP_293565.6	ILMN_1730744	0006380739	S	93	GGAAGGCGCACAGGATGCTAAAGCTTTACAACGGCCTCTCAGAATGGGAG	3	-	131214932-131214981		PREDICTED: Homo sapiens similar to Protein C11orf2 (Another new gene 2 protein) (LOC441582), mRNA.					
Homo sapiens	RefSeq	NM_007371.2	ILMN_162148	BRD3	NM_007371.2	NM_007371.2		8019	12408642	NM_007371.2	BRD3	NP_031397.1	ILMN_1785635	0006660626	S	2739	GTCAACACGCATTGTCCTTGTCATTTGGGCCCCGAGCTCTGACCCTCGTG	9	-	135888064-135888113	9q34.2b	Homo sapiens bromodomain containing 3 (BRD3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA0043; RING3L; ORFX	KIAA0043; RING3L; ORFX
Homo sapiens	RefSeq	NM_001131.2	ILMN_179175	CRISP1	NM_001131.2	NM_001131.2		167	25121981	NM_001131.2	CRISP1	NP_001122.2	ILMN_1758212	0001300397	I	650	ACAGGCGTCCCATGTGAAGCCTGCCCAAGTAACTGTGAAGACAAACTTTG	6	-	49914110-49914159	6p12.3b	Homo sapiens cysteine-rich secretory protein 1 (CRISP1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8543280] [evidence TAS]	The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [pmid 8838800] [evidence TAS]		CRISP-1; HUMARP; AEGL1; HSCRISP1D; HSCRISP1G; ARP	HUMARP; AEGL1; HSCRISP1G; ARP; CRISP-1; HSCRISP1D
Homo sapiens	RefSeq	NM_020414.3	ILMN_10146	DDX24	NM_020414.3	NM_020414.3		57062	14251213	NM_020414.3	DDX24	NP_065147.1	ILMN_1700628	0001010735	S	2623	AAGAAGCCGAAGGAGCCACAGCCGGAACAGCCACAGCCAAGTACAAGTGC	14	-	94517543-94517592	14q32.13a	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 (DDX24), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [pmid 10936056] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_019863.2	ILMN_3172	F8	NM_019863.2	NM_019863.2		2157	66346691	NM_019863.2	F8	NP_063916.1	ILMN_2370622	0005220709	A	693	CACCGTTACTGACTCGCTACCTTCGAATTCACCCCCAGAGTTGGGTGCAC	X	-	154065925-154065974	Xq28g	Homo sapiens coagulation factor VIII, procoagulant component (F8), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8626656] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 501196] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8626656] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2110473] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 501196] [evidence EXP]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 8275087] [evidence TAS]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7756647] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FVIII; F8 protein; HEMA; F8C; AHF; DXS1253E; F8B	FVIII; F8 protein; HEMA; F8C; AHF; DXS1253E; F8B
Homo sapiens	RefSeq	NM_019863.2	ILMN_3172	F8	NM_019863.2	NM_019863.2		2157	66346691	NM_019863.2	F8	NP_063916.1	ILMN_1670229	0006380349	I	111	CTGTGAGCGGCGTATGCAAATCGAGGGTCTCGGGGATGCGGATCCAAGAC	X	-	154114417-154114432:154114433-154114466	Xq28g	Homo sapiens coagulation factor VIII, procoagulant component (F8), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8626656] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 501196] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8626656] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2110473] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 501196] [evidence EXP]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 8275087] [evidence TAS]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7756647] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FVIII; F8 protein; HEMA; F8C; AHF; DXS1253E; F8B	FVIII; F8 protein; HEMA; F8C; AHF; DXS1253E; F8B
Homo sapiens	RefSeq	XM_001714260.1	ILMN_348464	LOC100133001	XM_001714260.1	XM_001714260.1		100133001	169177030	XM_001714260.1	LOC100133001	XP_001714312.1	ILMN_3246380	0005690209	S	551	GCGATACACCGCGGCCCCGGGACTGCGATACACCGCGGCCCCGGGACTTG	9	+	135867222-135867269:135867367-135867368	9q34.2b	PREDICTED: Homo sapiens similar to hCG30082 (LOC100133001), partial mRNA.					
Homo sapiens	RefSeq	NR_001575.1	ILMN_11542	RNF138P1	NR_001575.1	NR_001575.1		379013	37700274	NR_001575.1	RNF138P1		ILMN_2144064	0003440128	S	2700	CATCAACTGTCCATTGCAAACAGCAGTGAAGGAGACCAGTGGTGCAGGAG	5	-	54863378-54863427	5q11.2e	Homo sapiens ring finger protein 138 pseudogene 1 (RNF138P1), non-coding RNA.					
Homo sapiens	RefSeq	XR_037532.1	ILMN_338855	LOC100129866	XR_037532.1	XR_037532.1		100129866	169162311	XR_037532.1	LOC100129866		ILMN_3257475	0001230064	M	1040	GTTCCCTTCACCTCATCCGTCTCTTGCCAAACTGAAGGCTACTGCAGGCC				1q23.1f	PREDICTED: Homo sapiens misc_RNA (LOC100129866), miscRNA.					
Homo sapiens	RefSeq	XR_037532.1	ILMN_338855	LOC100129866	XR_037532.1	XR_037532.1		100129866	169162311	XR_037532.1	LOC100129866		ILMN_3181011	0006110612	A	221	CCAAAGAAGAGCCCAGCATATAGAGTGGAGGCAAGAGAGTGAGCCATGCG				1q23.1f	PREDICTED: Homo sapiens misc_RNA (LOC100129866), miscRNA.					
Homo sapiens	RefSeq	XM_946331.1	ILMN_43164	LOC654220	XM_946331.1	XM_946331.1		654220	89036497	XM_946331.1	LOC654220	XP_951424.1	ILMN_1725018	0003710608	I	3512	CCCAGGCCTCTGGTAGAAAGAAATGTATGTCCTTGCAGGAGGAACCCCCC					PREDICTED: Homo sapiens similar to hypothetical protein FLJ33915, transcript variant 1 (LOC654220), mRNA.					
Homo sapiens	RefSeq	NR_030215.1	ILMN_387897	MIR520H	NR_030215.1	NR_030215.1		574493	262205412	NR_030215.1	MIR520H		ILMN_3308856	0002940356	S	1	CCCATGCTGTGACCCTCTAGAGGAAGCACTTTCTGTTTGTTGTCTGAGAA				19q13.41b	Homo sapiens microRNA 520h (MIR520H), microRNA.					
Homo sapiens	Unigene	Hs.516049	ILMN_98984	HS.516049	Hs.516049		Hs.516049		8361447	BE044394			ILMN_1916260	0002680743	S	27	GTAGAGGGTTAGAGGGCAGCCAGACAGTGGCAGGACAAAAAAGGAGGGCT	2	+	64411146-64411195		ho44f09.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:3040265 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002109.3	ILMN_28863	HARS	NM_002109.3	NM_002109.3		3035	18201902	NM_002109.3	HARS	NP_002100.2	ILMN_1763523	0003940551	S	1888	AGGGCCCCGCACCAGTTGGAGCAGATGCCTCCCCACCACCAATTGCCAAA	5	-	140053516-140053565	5q31.3b	Homo sapiens histidyl-tRNA synthetase (HARS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6427] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His) [goid 4821] [pmid 1549469] [evidence NAS]; Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His) [goid 4821] [pmid 7755634] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ20491; HRS	FLJ20491; HRS
Homo sapiens	RefSeq	NR_001317.1	ILMN_5428	HCG4P6	NR_001317.1	NR_001317.1		80868	30231209	NR_001317.1	HCG4P6		ILMN_1752182	0006040131	S	632	CCCCTTAGTCCCCACCACCCTGTCACTTCTAAATTGTGGCTCTAGCATTG	6	-	30000726-30000775	6p21.33b	Homo sapiens HLA complex group 4 pseudogene 6 (HCG4P6), non-coding RNA.				bPG309N1.1; bQB90C11.3; bCX67J3.3; HCGIV-06; HCGIV.5; HCGIV-6	bPG309N1.1; bQB90C11.3; bCX67J3.3; HCGIV-06; HCGIV.5; HCGIV-6
Homo sapiens	RefSeq	XM_926358.1	ILMN_171181	SCRT1	NM_031309.4	NM_031309.4		83482	115527072	NM_031309.4	SCRT1	NP_112599.1	ILMN_1741617	0000510139	S	7	ACCCGCGCTGCCTCCGCCGCTCCTCGGATGGTGACGGGGCCCTGCCGCCG	8	-	145559887-145559936	8q24.3h	Homo sapiens scratch homolog 1, zinc finger protein (Drosophila) (SCRT1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11274425] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11274425] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SCRT; DKFZp547F072	
Homo sapiens	RefSeq	XM_942915.1	ILMN_40200	LOC647645	XM_942915.1	XM_942915.1		647645	89031704	XM_942915.1	LOC647645	XP_948008.1	ILMN_1674108	0003890209	S	162	TAAAACAGGTACGGCGGTCACTCTGCAAAAGACACCGGGCACGGCGCACA					PREDICTED: Homo sapiens hypothetical protein LOC647645 (LOC647645), mRNA.					
Homo sapiens	RefSeq	XM_001720172.1	ILMN_351179	LOC100130892	XM_001720172.1	XM_001720172.1		100130892	169171880	XM_001720172.1	LOC100130892	XP_001720224.1	ILMN_3195253	0005270735	A	444	TATTGCATGGGGGTACCCCAATCTGAAGTCAGTAAATGAACTAATCTACA				7q31.1a	PREDICTED: Homo sapiens hypothetical protein LOC100130892 (LOC100130892), mRNA.					
Homo sapiens	RefSeq	NM_015278.3	ILMN_181709	SASH1	NM_015278.3	NM_015278.3		23328	45935384	NM_015278.3	SASH1	NP_056093.3	ILMN_2185984	0005390102	S	7271	GCAGCAAAAAAGGTCAACTTGCCAAGTCACTGCTGCCATGTGTGTACTGT	6	+	148871542-148871591	6q24.3c	Homo sapiens SAM and SH3 domain containing 1 (SASH1), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]		RP3-323M4.1; dJ323M4; dJ323M4.1; KIAA0790; SH3D6A	RP3-323M4.1; dJ323M4; KIAA0790; dJ323M4.1; SH3D6A
Homo sapiens	RefSeq	NM_001976.2	ILMN_16651	ENO3	NM_001976.3	NM_001976.3		2027	153267426	NM_001976.3	ENO3	NP_001967.2	ILMN_1678904	0001240300	A	1381	GGCTCTTGGGGACAAGGCAATCTTTGCTGGACGCAAGTTCCGTAACCCGA	17	+	4801006-4801055	17p13.2b	Homo sapiens enolase 3 (beta, muscle) (ENO3), transcript variant 1, mRNA.	A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water [goid 15] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O [goid 4634] [pmid 8513787] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	MSE	MSE
Homo sapiens	RefSeq	XM_001725627.1	ILMN_350177	LOC100131892	XM_001725627.1	XM_001725627.1		100131892	169209841	XM_001725627.1	LOC100131892	XP_001725679.1	ILMN_3293229	0003310689	M	2206	ATAGCCCTGGCGATTGACAGCCGCAACATCCAATGACGACTCCGCCACCG	16	+	30364726-30364775	16p11.2c	PREDICTED: Homo sapiens hypothetical protein LOC100131892 (LOC100131892), mRNA.					
Homo sapiens	RefSeq	XM_001725627.1	ILMN_350177	LOC100131892	XM_001725627.1	XM_001725627.1		100131892	169209841	XM_001725627.1	LOC100131892	XP_001725679.1	ILMN_3216720	0005720196	A	1739	ATGACGCAGGAGTCCATCCCGATGCCCAGGGCTGGAAAGCGGGGGCCGCA	16	+	30364179-30364217:30364298-30364308	16p11.2c	PREDICTED: Homo sapiens hypothetical protein LOC100131892 (LOC100131892), mRNA.					
Homo sapiens	RefSeq	NR_030714.1	ILMN_388281	MIR629	NR_030714.1	NR_030714.1		693214	262263306	NR_030714.1	MIR629		ILMN_3310121	0006840376	S	27	TACGTTGGGAGAACTTTTACGGTGAACCAGGAGGTTCTCCCAACGTAAGC				15q23b	Homo sapiens microRNA 629 (MIR629), microRNA.					
Homo sapiens	RefSeq	NM_002844.2	ILMN_5715	PTPRK	NM_002844.2	NM_002844.2		5796	18860901	NM_002844.2	PTPRK	NP_002835.2	ILMN_1810962	0006280201	S	5592	GAGTTTTTCAGCCTGTGGCCCAGCACTGGTCAAGAAAACAAGATGGCAAC	6	-	128331966-128332015	6q22.33b-q22.33c	Homo sapiens protein tyrosine phosphatase, receptor type, K (PTPRK), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9047348] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5001] [pmid 9047348] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp779N1045; DKFZp686C2268; R-PTP-kappa	DKFZp779N1045; DKFZp686C2268; R-PTP-kappa
Homo sapiens	Unigene	Hs.563406	ILMN_116278	HS.563406	Hs.563406		Hs.563406		5393745	AI807179			ILMN_1880449	0006480048	S	382	CAGAGCAGGATGGAGCGTGGCCTGTGGAAGGAAAGTGGATCTGGAGGGAT	6	+	17168877-17168926		wf25f10.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2356651 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014712.1	ILMN_24764	SETD1A	NM_014712.1	NM_014712.1		9739	55741676	NM_014712.1	SETD1A	NP_055527.1	ILMN_1714327	0002510674	S	6245	AGTCCTGGGGACTCCGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGA	16	+	30903280-30903329	16p11.2c	Homo sapiens SET domain containing 1A (SETD1A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12670868] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	KIAA0339; Set1A; Set1	KIAA0339; Set1A; Set1
Homo sapiens	RefSeq	XR_040843.1	ILMN_343835	LOC731797	XR_040843.1	XR_040843.1		731797	169213262	XR_040843.1	LOC731797		ILMN_3225521	0006330050	A	658	CACGTCGCCTCCTTTGACCGGAAGAGTGTTGAGTTTCCAGGCACTTGCGC	19	+	40289370-40289419	19q13.11c	PREDICTED: Homo sapiens misc_RNA (LOC731797), miscRNA.					
Homo sapiens	RefSeq	NM_001123376.1	ILMN_356992	TMEM72	NM_001123376.1	NM_001123376.1		643236	183227674	NM_001123376.1	TMEM72	NP_001116848.1	ILMN_3236900	0003520546	S	773	GACTAAGAAGCCCAGTGCCCTCCAGCCCCCCAACACCCTGATGGAGCTGA	10	+	45430330-45430379	10q11.21c	Homo sapiens transmembrane protein 72 (TMEM72), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_030940.3	ILMN_171173	ISCA1	NM_030940.3	NM_030940.3		81689	52426767	NM_030940.3	ISCA1	NP_112202.2	ILMN_2219556	0005960221	S	1535	ACCCAGAATTATGCTTTTGGAATGTGGTCCTCACTGTACAGGAGAATGTG	9	-	88879880-88879929	9q21.33b	Homo sapiens iron-sulfur cluster assembly 1 homolog (S. cerevisiae) (ISCA1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	hIscA; RP11-507D14.2; HBLD2; ISA1; MGC4276	hIscA; RP11-507D14.2; HBLD2; ISA1; MGC4276
Homo sapiens	RefSeq	XM_926021.1	ILMN_36937	LOC642527	XM_926021.1	XM_926021.1		642527	89058116	XM_926021.1	LOC642527	XP_931114.1	ILMN_1710112	0001190100	S	61	GGCCCAACAGAGGAGCTGAGTGAGGCCGAGACTGAAAGCAAGTCCCAAAC	21	+	13821891-13821940		PREDICTED: Homo sapiens similar to Sorting nexin-19 (LOC642527), mRNA.					
Homo sapiens	RefSeq	XM_945379.1	ILMN_139142	NOTCH2	XM_945379.1	XM_945379.1		4853	88952297	XM_945379.1	NOTCH2	XP_950472.1	ILMN_1777758	0000360474	I	3527	GCCTGGTCAGTAAGATTTCTTGTTGCTTCACAGAAAAGCAACTAATGGCC				1p12a	PREDICTED: Homo sapiens Notch homolog 2 (Drosophila), transcript variant 2 (NOTCH2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1303260] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9244302] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 9244302] [evidence IDA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [pmid 9244302] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9244302] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12531696] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12531696] [evidence TAS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 11306509] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9244302] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12760378] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 11306509] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 12531696] [evidence IEP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 11306509] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [pmid 11306509] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 1303260] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [pmid 11306509] [evidence IDA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]	 [goid 3706] [pmid 9244302] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9244302] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12531696] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9244302] [evidence NAS]		
Homo sapiens	RefSeq	NM_152687.2	ILMN_2666	GAPT	NM_152687.2	NM_152687.2		202309	142388259	NM_152687.2	GAPT	NP_689900.1	ILMN_3242271	0007570541	S	1552	CTGGCTCAGAATTATTGTCATAGGCTCCTAACTGTTCCTCCTGCTTCTAG	5	+	57791521-57791570	5q11.2g	Homo sapiens GRB2-binding adaptor protein, transmembrane (GAPT), mRNA.				MGC70478; FLJ33641	MGC70478; FLJ33641
Homo sapiens	RefSeq	NM_152687.1	ILMN_2666	GAPT	NM_152687.2	NM_152687.2		202309	142388259	NM_152687.2	GAPT	NP_689900.1	ILMN_1675191	0006480079	S	1880	GCCTCTTCTCTCAAGCCTGCTTCAGATCATAAGTTCTTCCACACATCTCC	5	+	57791849-57791898	5q11.2g	Homo sapiens GRB2-binding adaptor protein, transmembrane (GAPT), mRNA.				MGC70478; FLJ33641	MGC70478; FLJ33641
Homo sapiens	Unigene	Hs.332056	ILMN_86349	HS.332056	Hs.332056		Hs.332056		34366871	BX647714			ILMN_1866460	0000610504	S	1572	CCTCCATCTGGATGTTGATTTCTTACCTTTTGTTAGTGTGTTCCGCCTCC	3	-	69149570-69149619		Homo sapiens mRNA; cDNA DKFZp686I07266 (from clone DKFZp686I07266)					
Homo sapiens	RefSeq	NM_183377.1	ILMN_15048	ACCN1	NM_001094.4	NM_001094.4		40	34452696	NM_001094.4	ACCN1	NP_001085.2	ILMN_1779685	0000240592	A	2436	GGACGCCTGTGTTCACCCATGGTGCCCATGTCGTTCTTCTCTCCCTGTGA	17	-	31340310-31340359	17q11.2e-q12a	Homo sapiens amiloride-sensitive cation channel 1, neuronal (ACCN1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8626462] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8626462] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8626462] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [pmid 8626462] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11802773] [evidence IPI];  [goid 15280] [pmid 8626462] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	BNC1; hBNaC1; MDEG; BNaC1; ASIC2a; ACCN; ASIC2	BNC1; hBNaC1; MDEG; BNaC1; ASIC2a; ACCN; ASIC2
Homo sapiens	RefSeq	NM_001094.4	ILMN_15048	ACCN1	NM_001094.4	NM_001094.4		40	34452696	NM_001094.4	ACCN1	NP_001085.2	ILMN_1665932	0002100255	I	94	TAAACACTCACCCCTGTCAGCGTGCGGCTGGGCTCTCAGGATAAACTCAC	17	-	32483682-32483731	17q11.2e-q12a	Homo sapiens amiloride-sensitive cation channel 1, neuronal (ACCN1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8626462] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8626462] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8626462] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [pmid 8626462] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11802773] [evidence IPI];  [goid 15280] [pmid 8626462] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	BNC1; hBNaC1; MDEG; BNaC1; ASIC2a; ACCN; ASIC2	BNC1; hBNaC1; MDEG; BNaC1; ASIC2a; ACCN; ASIC2
Homo sapiens	RefSeq	NM_001005368.1	ILMN_181781	ZNF32	NM_001005368.1	NM_001005368.1		7580	53759140	NM_001005368.1	ZNF32	NP_001005368.1	ILMN_1673112	0005900612	I	65	GAGAGGTCGGCGGTCCGCAGAGCAGGGTCCCGTGGACCGGAGAGCGGGAT	10	-	44144038-44144087	10q11.21b	Homo sapiens zinc finger protein 32 (ZNF32), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX30	KOX30
Homo sapiens	RefSeq	NM_006973.2	ILMN_181781	ZNF32	NM_001005368.1	NM_001005368.1		7580	53759140	NM_001005368.1	ZNF32	NP_001005368.1	ILMN_1695362	0006110053	A	843	CTGTACCCAGTGCAGGAAGAGTTTCCACACCAGGGGGAATTGTATTCTGC	10	-	44139616-44139665	10q11.21b	Homo sapiens zinc finger protein 32 (ZNF32), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX30	KOX30
Homo sapiens	RefSeq	NM_015530.3	ILMN_14087	GORASP2	NM_015530.3	NM_015530.3		26003	29826293	NM_015530.3	GORASP2	NP_056345.3	ILMN_1748018	0003390592	S	2184	GGTGCCACAGTTTTAAACCAGAAGGTGGCACTCTGTGGCTCCTTGTAGTA	2	+	171531571-171531620	2q31.1c	Homo sapiens golgi reassembly stacking protein 2, 55kDa (GORASP2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GOLPH6; p59; FLJ13139; DKFZP434D156; GRS2; GRASP55	GOLPH6; p59; FLJ13139; DKFZP434D156; GRS2; GRASP55
Homo sapiens	RefSeq	NM_005028.3	ILMN_6957	PIP5K2A	NM_005028.3	NM_005028.3		5305	20302162	NM_005028.3	PIP5K2A	NP_005019.2	ILMN_2152465	0007200603	S	1459	GCAGCCTCGGACAGACATGAACATTGGAGGGACAGAGGTGGCTTCGGTGT	10	-	22866077-22866126	10p12.2a	Homo sapiens phosphatidylinositol-4-phosphate 5-kinase, type II, alpha (PIP5K2A), mRNA.		The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the phosphorylation of phosphatidylinositol phosphate to produce phosphatidylinositol bisphosphate [goid 16307] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PIP5KII-alpha; PIPK	PIP5KII-alpha; PIPK
Homo sapiens	RefSeq	XM_942500.1	ILMN_181677	CRLF2	XM_001133960.1	XM_001133960.1		64109	113430286	XM_001133960.1	CRLF2	XP_001133960.1	ILMN_1767573	0002030255	A	128	TCCAGCTTCCCCACCAGCCCCTCCAAGGTGGTGATGTGGTCACAATCGGG				Xp22.33e,Yp11.32a	PREDICTED: Homo sapiens cytokine receptor-like factor 2 (CRLF2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	NM_003956.2	ILMN_177069	CH25H	NM_003956.3	NM_003956.3		9023	95147553	NM_003956.3	CH25H	NP_003947.1	ILMN_1741021	0001770593	S	850	CGGTGGGTGCCCCTAAGACTCGGGACTGCTGTGCCTTTCACACTTGAATG	10	-	90966172-90966221	10q23.31b	Homo sapiens cholesterol 25-hydroxylase (CH25H), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9852097] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9852097] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: cholesterol + AH2 + O2 = 25-hydroxycholesterol + A + H2O [goid 1567] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C25H	C25H
Homo sapiens	RefSeq	NM_014161.2	ILMN_14120	MRPL18	NM_014161.2	NM_014161.2		29074	21265079	NM_014161.2	MRPL18	NP_054880.2	ILMN_1804479	0002340026	S	396	GCACTTGTGGAGCATCAGAATGGCAAGGTTGTGGTTTCGGCCTCCACTCG	6	+	160138343-160138392	6q25.3f	Homo sapiens mitochondrial ribosomal protein L18 (MRPL18), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [pmid 11543634] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11543634] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11543634] [evidence NAS]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [pmid 11543634] [evidence NAS]	HSPC071; MRP-L18	HSPC071; MRP-L18
Homo sapiens	RefSeq	NM_014161.2	ILMN_14120	MRPL18	NM_014161.2	NM_014161.2		29074	21265079	NM_014161.2	MRPL18	NP_054880.2	ILMN_2230672	0005900240	S	704	CTGTCAGCCACTACAGCCATCAAAAGAGAGCATCTGGAAGAACAGCCAGC	6	+	160139184-160139233	6q25.3f	Homo sapiens mitochondrial ribosomal protein L18 (MRPL18), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [pmid 11543634] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11543634] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11543634] [evidence NAS]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [pmid 11543634] [evidence NAS]	HSPC071; MRP-L18	HSPC071; MRP-L18
Homo sapiens	RefSeq	XM_928570.1	ILMN_42329	LOC645550	XM_928570.1	XM_928570.1		645550	89027774	XM_928570.1	LOC645550	XP_933663.1	ILMN_1724634	0005690403	S	4498	CTGCCCTGTGGCGGGAGGTGAGACATGTTGGCAGTAATGCTGCCTTGCTT	8	+	7415873-7415922		PREDICTED: Homo sapiens hypothetical protein LOC645550 (LOC645550), mRNA.					
Homo sapiens	RefSeq	NM_005418.3	ILMN_23836	ST5	NM_005418.3	NM_005418.3		6764	47132528	NM_005418.3	ST5	NP_005409.3	ILMN_1692207	0002340470	I	171	TGAAGGGGAAGAACAGGAAACAGGAAGACATGAGATGAAGGAAACAGGAG	11	-	8902567-8902616	11p15.4b-p15.4a	Homo sapiens suppression of tumorigenicity 5 (ST5), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9632734] [evidence IPI]	HTS1; MGC33090; DENND2B; p126	HTS1; MGC33090; DENND2B; p126
Homo sapiens	RefSeq	NM_001105522.1	ILMN_343124	LOC729384	NM_001105522.1	NM_001105522.1		729384	157502226	NM_001105522.1	LOC729384	NP_001098992.1	ILMN_3242226	0000060497	S	121	TCTGGAATCTCGCAAGTCTTCCAGAGGGAACTCACCTGCCCCATCTGCCT	11	+	89299584-89299633	11q14.3b	Homo sapiens tripartite motif protein 49-like (LOC729384), mRNA.					
Homo sapiens	RefSeq	NM_003588.2	ILMN_175220	CUL4B	NM_001079872.1	NM_001079872.1		8450	121114301	NM_001079872.1	CUL4B	NP_001073341.1	ILMN_1691535	0005860368	S	2321	TGGGCTATTGGCCGACATATGTGCCTATGGAAGTTCATTTACCACCAGAG	X	-	119669798-119669798:119670782-119670830	Xq24d	Homo sapiens cullin 4B (CUL4B), transcript variant 2, mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 8681378] [evidence NAS]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12609982] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12504026] [evidence IPI]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	SFM2; DKFZp686F1470; MRXSC; MRXHF2; KIAA0695	KIAA0695
Homo sapiens	RefSeq	NM_001079872.1	ILMN_175220	CUL4B	NM_001079872.1	NM_001079872.1		8450	121114301	NM_001079872.1	CUL4B	NP_001073341.1	ILMN_2385161	0001300220	A	4877	GTTAGGAGGAGACTCTTGATGTCACCTTCAGTATCTTGAAAGCGGGTCCC	X	-	119658701-119658750	Xq24d	Homo sapiens cullin 4B (CUL4B), transcript variant 2, mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 8681378] [evidence NAS]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12609982] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12504026] [evidence IPI]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	SFM2; DKFZp686F1470; MRXSC; MRXHF2; KIAA0695	SFM2; DKFZp686F1470; MRXSC; MRXHF2; KIAA0695
Homo sapiens	RefSeq	NM_198555.3	ILMN_28831	ANKRD36	NM_198555.3	NM_198555.3		375248	110349990	NM_198555.3	ANKRD36	NP_940957.3	ILMN_2280568	0005810050	I	165	GCGCTTGTGCTCGGATGGCTTCGCATTTCCCCAATACCCCATTAAACCGT	2	+	97143245-97143294	2q11.2b	Homo sapiens ankyrin repeat domain 36 (ANKRD36), mRNA.				UNQ2430	UNQ2430
Homo sapiens	RefSeq	NM_198555.3	ILMN_28831	ANKRD36	NM_198555.3	NM_198555.3		375248	110349990	NM_198555.3	ANKRD36	NP_940957.3	ILMN_2382431	0000150730	A	61	AGGCGGCGATCCCCGAAGGCGAGCTGAAATACGGCTGCAGGCTACAATTT	2	+	97143141-97143190	2q11.2b	Homo sapiens ankyrin repeat domain 36 (ANKRD36), mRNA.				UNQ2430	UNQ2430
Homo sapiens	RefSeq	NM_033356.2	ILMN_2110	CASP8	NM_033356.3	NM_033356.3		841	122056471	NM_033356.3	CASP8	NP_203520.1	ILMN_1787749	0000290592	I	51	GTCTTAGATGCTCAGATGGTAGTGGATAGGCCTGTGACGAAGGTGCTACC	2	+	201833518-201833567	2q33.1f	Homo sapiens caspase 8, apoptosis-related cysteine peptidase (CASP8), transcript variant C, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10891503] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8681376] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12804595] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10894160] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12887920] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9721089] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10891503] [evidence TAS]; A heterodimer associated with 90S and 66S preribosomes in the nucleolus; involved in ribosomal large subunit biogenesis [goid 30690] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12888622] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 11048727] [evidence EXP]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 8681376] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11717445] [evidence IPI]	MCH5; MGC78473; MACH; ALPS2B; FLICE; CAP4	MGC78473; MACH; MCH5; FLICE; CAP4
Homo sapiens	RefSeq	XM_938457.1	ILMN_42209	LOC649385	XM_938457.1	XM_938457.1		649385	89061505	XM_938457.1	LOC649385	XP_943550.1	ILMN_1802730	0006520647	S	677	TGAGGGGATCTCCCAACTGGCCACGACATGCGGGGATTTTGCCTACGCCA					PREDICTED: Homo sapiens similar to double homeobox, 4 (LOC649385), mRNA.					
Homo sapiens	Unigene	Hs.582099	ILMN_134280	HS.582099	Hs.582099		Hs.582099		28105651	CB137572			ILMN_1869135	0002190280	S	104	CTCAGGGATCCTAGACAGATCCCGGTGTTCTTCCTGGCTGAGGAGTGGTT	4	+	191179435-191179453:191179572-191179602		K-EST0190316 L5HLK1 Homo sapiens cDNA clone L5HLK1-35-C11 5, mRNA sequence					
Homo sapiens	RefSeq	XM_928770.1	ILMN_42915	LOC440910	XM_928770.1	XM_928770.1		440910	88953590	XM_928770.1	LOC440910	XP_933863.1	ILMN_1679545	0001440136	I	2580	CCCACTAGCTGTAGGATGGTGTGCTGCAGTTCACAGGGTAAAGGAGATAG	2	+	131776287-131776322:131776625-131776638		PREDICTED: Homo sapiens hypothetical protein LOC440910, transcript variant 2 (LOC440910), mRNA.					
Homo sapiens	Unigene	Hs.255813	ILMN_83607	HS.255813	Hs.255813		Hs.255813		34534377	AK127458			ILMN_1896431	0007510725	S	2153	GCTGTAGACATTTTTAAGTAACTCCGTGGATCCCTCTCCTTCCACCCACT	16	-	61649110-61649159		Homo sapiens cDNA FLJ45550 fis, clone BRTHA2036660					
Homo sapiens	RefSeq	NM_032285.1	ILMN_2776	MRI1	NM_001031727.2	NM_001031727.2		84245	85861239	NM_001031727.2	MRI1	NP_001026897.1	ILMN_1732089	0005560370	I	3045	CCTTCTTAAATTCTGTACCAGAGGTGAGTGCCACACCCTAACCTAGTCTG	19	+	13745964-13746013	19p13.13a	Homo sapiens methylthioribose-1-phosphate isomerase homolog (S. cerevisiae) (MRI1), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_001031727.1	ILMN_2776	MRI1	NM_001031727.2	NM_001031727.2		84245	85861239	NM_001031727.2	MRI1	NP_001026897.1	ILMN_1806828	0004860402	A	1328	CCAGGCTGCCCAGATTCAAATCCTGACTCCGCCACTTTTCCCACTGTATG	19	+	13744247-13744296	19p13.13a	Homo sapiens methylthioribose-1-phosphate isomerase homolog (S. cerevisiae) (MRI1), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_001925.1	ILMN_18400	DEFA4	NM_001925.1	NM_001925.1		1669	4503302	NM_001925.1	DEFA4	NP_001916.1	ILMN_1753347	0006550164	S	207	TGCTCTTCAGGTTTCAGGCTCAACAAGGGGCATGGTCTGCTCTTGCAGAT	8	-	6793630-6793663:6794250-6794265	8p23.1f	Homo sapiens defensin, alpha 4, corticostatin (DEFA4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Reactions triggered in response to the presence of a fungus that act to protect the cell or organism [goid 50832] [evidence IEA]		MGC120099; HNP-4; MGC138296; HP4; HP-4; DEF4	MGC120099; HNP-4; MGC138296; HP4; HP-4; DEF4
Homo sapiens	RefSeq	NM_001013734.1	ILMN_17232	RFPL4B	NM_001013734.2	NM_001013734.2		442247	153791359	NM_001013734.2	RFPL4B	NP_001013756.2	ILMN_1809077	0007160739	S	910	GCAAGCCCTCGCCTTCGCCGTGTGGGAATTTTCCTGGATGCTGACTTAGA	6	+	112671508-112671557	6q21i	Homo sapiens ret finger protein-like 4B (RFPL4B), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF211	RNF211
Homo sapiens	RefSeq	XM_936893.1	ILMN_38597	LOC647836	XM_936893.1	XM_936893.1		647836	89059371	XM_936893.1	LOC647836	XP_941986.1	ILMN_1773201	0003840274	S	2442	TCGTTGTCCCAGCGAGCCTCCGTCTTCCACTCACATGGCTCTTATGACGG					PREDICTED: Homo sapiens similar to wingless-type MMTV integration site family, member 7B precursor (LOC647836), mRNA.					
Homo sapiens	RefSeq	NM_206884.1	ILMN_24858	SLC26A5	NM_206884.1	NM_206884.1		375611	45827801	NM_206884.1	SLC26A5	NP_996767.1	ILMN_1757958	0004730382	A	861	CTGGTCCGTGGGTTTACCACCGCAGCAGCTGTGCATGTCTTCACCTCCAT	7	-	103050892-103050941	7q22.1g	Homo sapiens solute carrier family 26, member 5 (prestin) (SLC26A5), transcript variant c, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 12719379] [evidence IMP]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	MGC118888; DFNB61; MGC118886; MGC118887; MGC118889; PRES	MGC118888; DFNB61; MGC118886; MGC118887; MGC118889; PRES
Homo sapiens	RefSeq	NM_016014.2	ILMN_12685	FAM108B1	NM_016014.2	NM_016014.2		51104	71051599	NM_016014.2	FAM108B1	NP_057098.2	ILMN_1668336	0005960528	I	1533	TCTTCTCTTTACCAAACTTAACTGGATTAATATACCAATGATCCTTTCAA	9	-	74477398-74477447	9q21.13a	Homo sapiens family with sequence similarity 108, member B1 (FAM108B1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CGI-67; RP11-409O11.2; C9orf77	CGI-67; RP11-409O11.2; C9orf77
Homo sapiens	RefSeq	NM_016014.2	ILMN_12685	FAM108B1	NM_016014.2	NM_016014.2		51104	71051599	NM_016014.2	FAM108B1	NP_057098.2	ILMN_2374362	0002340056	A	1358	ACCTGTGGAGCCTCTCTGGGTTGAAGGAGCAGGTCACAATGATGTGGAAC	9	-	74481764-74481813	9q21.13a	Homo sapiens family with sequence similarity 108, member B1 (FAM108B1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CGI-67; RP11-409O11.2; C9orf77	CGI-67; RP11-409O11.2; C9orf77
Homo sapiens	RefSeq	NM_016014.2	ILMN_12685	FAM108B1	NM_016014.2	NM_016014.2		51104	71051599	NM_016014.2	FAM108B1	NP_057098.2	ILMN_1660440	0007510129	A	727	GCGGAAGCCGTTGGACTTTACATCTGTCTGAACGAGCAGACTGGCAGTAT	9	-	74489822-74489871	9q21.13a	Homo sapiens family with sequence similarity 108, member B1 (FAM108B1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CGI-67; RP11-409O11.2; C9orf77	CGI-67; RP11-409O11.2; C9orf77
Homo sapiens	RefSeq	NR_002214.1	ILMN_17365	C21ORF41	NR_002214.1	NR_002214.1		54073	59940383	NR_002214.1	C21orf41		ILMN_1722407	0001570025	A	236	TCTGGCTTCCTCTTCACTCTGATTTGCCCCTCTGTTGGTCTGACATGCCC	21	-	29891813-29891862	21q21.3c	Homo sapiens chromosome 21 open reading frame 41 (C21orf41) on chromosome 21.					
Homo sapiens	RefSeq	NR_002214.1	ILMN_17365	C21ORF41	NR_002214.1	NR_002214.1		54073	59940383	NR_002214.1	C21orf41		ILMN_1653577	0007000482	I	437	GGTGGGAACTGTAACACTCTAAGCACTCACACACCATGATTCCTTCTGGG	21	-	29890821-29890870	21q21.3c	Homo sapiens chromosome 21 open reading frame 41 (C21orf41) on chromosome 21.					
Homo sapiens	RefSeq	NM_182580.2	ILMN_364303	CYB561D1	NM_182580.2	NM_182580.2		284613	197304719	NM_182580.2	CYB561D1	NP_872386.1	ILMN_3256325	0001990092	M	4661	GAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC	1	+	110042791-110042840	1p13.3b	Homo sapiens cytochrome b-561 domain containing 1 (CYB561D1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_178031.2	ILMN_41781	TMEM132A	NM_178031.2	NM_178031.2		54972	89191854	NM_178031.2	TMEM132A	NP_821174.1	ILMN_2317923	0001690370	A	3188	TGGGTGTGTGAGGACATGGGGCTGAAGGACCCTGAGGAGCTTCGCAACTA	11	+	60460878-60460927	11q12.2a	Homo sapiens transmembrane protein 132A (TMEM132A), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp547E212; HSPA5BP1; FLJ20539; GBP; MGC138669	DKFZp547E212; HSPA5BP1; FLJ20539; GBP; MGC138669
Homo sapiens	RefSeq	XM_944472.1	ILMN_32057	LOC651031	XM_944472.1	XM_944472.1		651031	88954977	XM_944472.1	LOC651031	XP_949565.1	ILMN_1702012	0003130091	S	1	ATGCTTCTCTGGGGCCACCCGGCCTCTCCCCTCTTTCCGAACCCTAGGGC					PREDICTED: Homo sapiens hypothetical protein LOC651031 (LOC651031), mRNA.					
Homo sapiens	RefSeq	NM_194286.2	ILMN_24205	SRRM4	NM_194286.2	NM_194286.2		84530	50083280	NM_194286.2	SRRM4	NP_919262.2	ILMN_1811820	0004220253	S	8067	GTGCACCCCAAGGCCATTTCTCTGCATTGGAGGCTGCGAATCTCCTCTGG	12	+	118084925-118084974	12q24.23b	Homo sapiens serine/arginine repetitive matrix 4 (SRRM4), mRNA.				MU-MB-2.76	MU-MB-2.76
Homo sapiens	RefSeq	NM_000923.2	ILMN_29696	PDE4C	NM_000923.2	NM_000923.2		5143	115529444	NM_000923.2	PDE4C	NP_000914.2	ILMN_2117613	0005570722	S	2602	TCCTGGGCTTCTATCCCTGTGAGGAGAGGTGCTGTCTGCTGGAGCCTCTA				19p13.11c	Homo sapiens phosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila) (PDE4C), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [pmid 9349724] [evidence NAS]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [pmid 9349724] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DPDE1; MGC126222	PDE4C-791; DPDE1; MGC126222
Homo sapiens	RefSeq	XM_926939.1	ILMN_176099	LOC653635	XR_017611.1	XR_017611.1		653635	113402448	XR_017611.1	LOC653635		ILMN_1658957	0002650376	S	2595	GGGGGCTTGTCACCTCCCCCACCTTCTTCCTGAGTCATTCCTGCAGCCTT	1	-	3756-3805	1p36.33b	PREDICTED: Homo sapiens similar to CXYorf1-related protein (LOC653635), mRNA.					
Homo sapiens	RefSeq	NM_001024024.1	ILMN_14690	GCH1	NM_001024071.1	NM_001024071.1		2643	66932971	NM_001024071.1	GCH1	NP_001019242.1	ILMN_1812759	0000240053	A	1209	CCCATCTCTGCCACTTTGATGCTATTTGGGTTATGATGGGGCAAGATGGC	14	-	55309301-55309350	14q22.2b-q22.3a	Homo sapiens GTP cyclohydrolase 1 (GCH1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16778797] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10907721] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 3318829] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2463916] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [pmid 3318829] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11087823] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate [goid 6184] [pmid 2463916] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 17101830] [evidence IMP]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 9445252] [evidence IDA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 7678411] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [pmid 9445252] [evidence NAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 17717598] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [pmid 7678411] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [pmid 9445252] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [pmid 15604419] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 7678411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 12607127] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 9445252] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 15604419] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus [goid 34612] [pmid 9445252] [evidence IDA]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [pmid 16338639] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence ISS]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [pmid 7874165] [evidence IMP]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 17717598] [evidence IMP]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 12176133] [evidence IDA]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 15721862] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 11087823] [evidence IDA]	Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 3753653] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 11284739] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 8068008] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 16778797] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 8068008] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9092499] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16696853] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 3753653] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 14717702] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11087823] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 14717702] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 1669853] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DYT5; GTP-CH-1; GTPCH1; GCH	DYT5; GTP-CH-1; GTPCH1; GCH
Homo sapiens	RefSeq	NM_139267.1	ILMN_9802	STARD7	NM_139267.1	NM_139267.1		56910	21450855	NM_139267.1	STARD7	NP_644672.1	ILMN_2367782	0005720360	A	2470	CACTGTTCAGATAAGGTCACAATCTGATGCTGTCAGTTTGACCGAGCTGG	2	-	96214964-96215013	2q11.2a	Homo sapiens START domain containing 7 (STARD7), transcript variant 2, mRNA.				GTT1	GTT1
Homo sapiens	RefSeq	XM_926301.1	ILMN_37655	LOC642620	XM_926301.1	XM_926301.1		642620	89025598	XM_926301.1	LOC642620	XP_931394.1	ILMN_1665574	0003120343	S	61	GCTGCAGTAGGTCCTTGATGCGGCCATGTCCCTGCGACAGGAAGGACAAA	7	-	157347592-157347625:157347626-157347641	7q36.3d	PREDICTED: Homo sapiens hypothetical protein LOC642620 (LOC642620), mRNA.					
Homo sapiens	RefSeq	NM_002185.2	ILMN_10513	IL7R	NM_002185.2	NM_002185.2		3575	28610150	NM_002185.2	IL7R	NP_002176.2	ILMN_2342579	0003830349	A	1365	CTGACATTGAACCCAGTTGCTCAGGGTCAGCCCATTCTTACTTCCCTGGG	5	+	35876484-35876533	5p13.2c	Homo sapiens interleukin 7 receptor (IL7R), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA recombination, a process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents [goid 18] [pmid 9495344] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9843216] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9843216] [evidence TAS]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IEA]	Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 9495344] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with interleukin-7 to initiate a change in cell activity [goid 4917] [pmid 8266077] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8266077] [evidence IPI]	CDW127; CD127; IL-7R-alpha	CDW127; CD127; IL-7R-alpha
Homo sapiens	RefSeq	NM_001040282.1	ILMN_175292	TBC1D3G	NM_001040282.1	NM_001040282.1		654341	94536827	NM_001040282.1	TBC1D3G	NP_001035372.1	ILMN_2068991	0003310279	S	1674	GGCACTGATTCCGACCAGGGCACCCCCTTCAGAGCTAGGGACGAACAGCA	17	-	31871671-31871720	17q12b	Homo sapiens TBC1 domain family, member 3G (TBC1D3G), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]		
Homo sapiens	RefSeq	NM_006840.3	ILMN_20751	LILRB5	NM_006840.3	NM_006840.3		10990	125987589	NM_006840.3	LILRB5	NP_006831.1	ILMN_2339294	0004610010	A	2007	CAGGACATCCTGGGAACTCTGGGACTCACTAGATTCTGCAGTCAAAGATG	19	-	59446289-59446338	19q13.42a	Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5 (LILRB5), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 9548455] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9548455] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9548455] [evidence TAS]	LIR8; LIR-8; CD85C	LIR8; LIR-8; CD85C
Homo sapiens	RefSeq	NM_006840.2	ILMN_20751	LILRB5	NM_006840.3	NM_006840.3		10990	125987589	NM_006840.3	LILRB5	NP_006831.1	ILMN_1732919	0007050468	S	1881	CTAGCCCACGGGGGACCCAGATCTCATACTCAACAGAAGGAGACTCAGAG	19	-	59446415-59446461:59446462-59446464	19q13.42a	Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5 (LILRB5), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 9548455] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9548455] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9548455] [evidence TAS]	LIR8; LIR-8; CD85C	LIR8; LIR-8; CD85C
Homo sapiens	RefSeq	XM_941129.1	ILMN_45024	LOC651868	XM_941129.1	XM_941129.1		651868	89037002	XM_941129.1	LOC651868	XP_946222.1	ILMN_1658801	0000160192	S	51	CCAGCCCTCCTGGGTTAGTCTGCAGTTCTTGACAGGTTGTGTGCACCTCC				13q13.3b	PREDICTED: Homo sapiens similar to Histone H2a (LOC651868), mRNA.					
Homo sapiens	Unigene	Hs.537673	ILMN_103430	HS.537673	Hs.537673		Hs.537673		1747828	AA169153			ILMN_1841301	0005340739	S	1	GCACCATGGCTGGCTTCAAAAACCTTTAATAAGCCCCTCCTGTTTGCTAA	1	+	212805966-212806015		zp19f11.s1 Stratagene fetal retina 937202 Homo sapiens cDNA clone IMAGE:609933 3, mRNA sequence					
Homo sapiens	RefSeq	NM_018306.2	ILMN_3602	TMEM40	NM_018306.2	NM_018306.2		55287	31542666	NM_018306.2	TMEM40	NP_060776.2	ILMN_2149292	0004830349	S	1191	AAATCCCAGGCTATCTGCATGCGCTCTCAGGTGCTACCGAGCCATCCTGG	3	-	12775980-12776029	3p25.1d	Homo sapiens transmembrane protein 40 (TMEM40), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ11036	FLJ11036
Homo sapiens	RefSeq	NM_201633.1	ILMN_19540	TCF7	NM_201633.1	NM_201633.1		6932	42518073	NM_201633.1	TCF7	NP_963964.1	ILMN_1707005	0005670592	I	1003	CTCCCTTGGAAGACAGGAGAGATGACTCCCTTGGAAGACAGATGACAGCC	5	+	133509524-133509573	5q31.1d	Homo sapiens transcription factor 7 (T-cell specific, HMG-box) (TCF7), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1569101] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1569101] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 1569101] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9783587] [evidence IPI]	MGC47735; TCF-1	MGC47735; TCF-1
Homo sapiens	RefSeq	NM_017521.2	ILMN_176432	FEV	NM_017521.2	NM_017521.2		54738	56550101	NM_017521.2	FEV	NP_059991.1	ILMN_1751460	0002510187	S	1669	TCTTTTCCCACTTTTGCTCTTCCCCAAGGAACTGCTCCCACCTCAGCACG	2	-	219845969-219846018	2q35f	Homo sapiens FEV (ETS oncogene family) (FEV), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9121764] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9121764] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9121764] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PET-1; HSRNAFEV	PET-1; HSRNAFEV
Homo sapiens	RefSeq	NM_001039361.1	ILMN_24335	PRAMEF10	NM_001039361.1	NM_001039361.1		343071	86262139	NM_001039361.1	PRAMEF10	NP_001034450.1	ILMN_2242013	0001240114	I	496	GATGGGAGAGCACCAGCCCTTGAAGGTGTTCATAGACCTCTGCCTAAAGG	1	-	12877397-12877446	1p36.21d	Homo sapiens PRAME family member 10 (PRAMEF10), mRNA.				MGC138415; MGC138413; RP5-845O24.7	MGC138415; MGC138413; RP5-845O24.7
Homo sapiens	RefSeq	NM_001039361.1	ILMN_24335	PRAMEF10	NM_001039361.1	NM_001039361.1		343071	86262139	NM_001039361.1	PRAMEF10	NP_001034450.1	ILMN_2312106	0000380435	A	1187	CCTGCCCTGAGCCACTGTTCCCAGCTCACCACCTTCAACTTTCATGGAAA	1	-	12875595-12875644	1p36.21d	Homo sapiens PRAME family member 10 (PRAMEF10), mRNA.				MGC138415; MGC138413; RP5-845O24.7	MGC138415; MGC138413; RP5-845O24.7
Homo sapiens	RefSeq	NM_017905.3	ILMN_19218	TMCO3	NM_017905.3	NM_017905.3		55002	46358357	NM_017905.3	TMCO3	NP_060375.3	ILMN_2220739	0001410020	S	2498	CAGCCCTCTAGCAGAGCGTCAGTGCAGTCGTGTTATCCCGGCTTTTACAG	13	+	113251959-113252008	13q34d	Homo sapiens transmembrane and coiled-coil domains 3 (TMCO3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]	C13orf11; FLJ20623	C13orf11; FLJ20623
Homo sapiens	RefSeq	NM_180977.1	ILMN_8961	PPP2R5D	NM_180977.1	NM_180977.1		5528	31083287	NM_180977.1	PPP2R5D	NP_851308.1	ILMN_2359887	0003710010	A	2069	CAAATAGGCCCCCCAGTCCCAGCCGTGTGCTGGCAGATAGGGTTGTATTA	6	+	42979516-42979565	6p21.1d	Homo sapiens protein phosphatase 2, regulatory subunit B', delta isoform (PPP2R5D), transcript variant 3, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8703017] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8703017] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17540176] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17110335] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 8703017] [evidence TAS]	MGC8949; MGC2134; B56D	MGC8949; MGC2134; B56D
Homo sapiens	RefSeq	NM_001005619.1	ILMN_25923	ITGB4	NM_001005619.1	NM_001005619.1		3691	54607026	NM_001005619.1	ITGB4	NP_001005619.1	ILMN_2334210	0003940132	A	5352	GAGTTTGTGAGCCGGACACTGACCACCAGCGGAACCCTTAGCACCCACAT	17	+	71265157-71265206	17q25.1c-q25.1d	Homo sapiens integrin, beta 4 (ITGB4), transcript variant 2, mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 7545057] [evidence TAS]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2311577] [evidence NAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11375975] [evidence IPI]	CD104	CD104
Homo sapiens	RefSeq	NM_001005619.1	ILMN_25923	ITGB4	NM_001005619.1	NM_001005619.1		3691	54607026	NM_001005619.1	ITGB4	NP_001005619.1	ILMN_2253707	0004490367	I	4427	GGCTCAGATGAAAGGGTTCCCCCCTTCCAGGGGCCCACGAGACTCTATAA	17	+	71262801-71262850	17q25.1c-q25.1d	Homo sapiens integrin, beta 4 (ITGB4), transcript variant 2, mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 7545057] [evidence TAS]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2311577] [evidence NAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11375975] [evidence IPI]	CD104	CD104
Homo sapiens	RefSeq	NM_001008756.1	ILMN_23538	GCET2	NM_152785.3	NM_152785.3		257144	57165367	NM_152785.3	GCET2	NP_689998.1	ILMN_1667449	0002510082	A	2802	GCTGGCTATTCAGGGTCACCCAGCAGTCCTCCAGCAAGGTAGAAACACCA	3	-	113322827-113322876	3q13.2a	Homo sapiens germinal center expressed transcript 2 (GCET2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]			MGC40441; HGAL; GCAT2	MGC40441; HGAL; GCAT2
Homo sapiens	RefSeq	XM_935731.1	ILMN_46904	LOC641964	XM_935731.1	XM_935731.1		641964	89026866	XM_935731.1	LOC641964	XP_940824.1	ILMN_1700932	0004920358	S	61	CTCTGGGAACAAGTGGGAAGAAATCTTAAAAGACATCATGCACAAGGGCA					PREDICTED: Homo sapiens similar to Periphilin 1 (Gastric cancer antigen Ga50) (LOC641964), mRNA.					
Homo sapiens	RefSeq	NM_016539.1	ILMN_1560	SIRT6	NM_016539.1	NM_016539.1		51548	7706709	NM_016539.1	SIRT6	NP_057623.1	ILMN_1654246	0001850739	S	1350	CCCTGCCACACCCCAGCCTCTGACTTGCTGTGTTGTCCAGAGGTGAGGCT	19	-	4174342-4174391	19p13.3e	Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) (SIRT6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence ISS]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence ISS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	SIR2L6	SIR2L6
Homo sapiens	RefSeq	XM_001714762.1	ILMN_344781	LOC100130465	XM_001714762.1	XM_001714762.1		100130465	169169911	XM_001714762.1	LOC100130465	XP_001714814.1	ILMN_3187799	0006480685	A	1471	CCCCTTTGATCCAGCAAGCCCATCTAGAGATTTCCTAGGATAGACAAGCC				6q27c	PREDICTED: Homo sapiens hypothetical LOC100130465 (LOC100130465), mRNA.					
Homo sapiens	RefSeq	NM_003840.3	ILMN_17600	TNFRSF10D	NM_003840.3	NM_003840.3		8793	42544227	NM_003840.3	TNFRSF10D	NP_003831.2	ILMN_1666022	0000830113	S	3095	CCATGGAGTTTTAGGAGGGGATGGCCTTTCCGGTCTTCGCACTTCCATCC	8	-	23049436-23049485	8p21.3a	Homo sapiens tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain (TNFRSF10D), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9430226] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9430226] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9430226] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CD264; TRUNDD; TRAILR4; DCR2	CD264; DCR2; TRUNDD; TRAILR4
Homo sapiens	RefSeq	XM_001716544.1	ILMN_334204	LOC100127946	XM_001716544.1	XM_001716544.1		100127946	169202953	XM_001716544.1	LOC100127946	XP_001716596.1	ILMN_3230370	0004860592	I	507	GGGGTCAGTTCTCACTCAGGACAGCCGCACTCCACTGCACAGGACACTTA				11q13.3b	PREDICTED: Homo sapiens hypothetical LOC100127946 (LOC100127946), mRNA.					
Homo sapiens	RefSeq	NM_178517.3	ILMN_162681	PIGW	NM_178517.3	NM_178517.3		284098	75750491	NM_178517.3	PIGW	NP_848612.2	ILMN_1743397	0005080647	S	1434	GCCTGATCAACCTGATGGTAGATACATTACACAGCAGTACCTTGTGGGCC	17	+	31968442-31968491	17q12b	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class W (PIGW), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 14517336] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Catalysis of the transfer of an acyl group to an oxygen atom on the acceptor molecule [goid 8374] [pmid 14517336] [evidence EXP]; Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor) [goid 16746] [evidence IEA]	Gwt1; FLJ37433	FLJ37433; Gwt1
Homo sapiens	RefSeq	NM_178517.3	ILMN_162681	PIGW	NM_178517.3	NM_178517.3		284098	75750491	NM_178517.3	PIGW	NP_848612.2	ILMN_2178186	0002030674	S	1974	GCTGGGATTACAGGTGTGAGCCACCACACTGGGCCAATGCTTAATATTTT	17	+	31968982-31969031	17q12b	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class W (PIGW), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 14517336] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Catalysis of the transfer of an acyl group to an oxygen atom on the acceptor molecule [goid 8374] [pmid 14517336] [evidence EXP]; Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor) [goid 16746] [evidence IEA]	Gwt1; FLJ37433	FLJ37433; Gwt1
Homo sapiens	RefSeq	NM_152236.1	ILMN_5172	GAS2L1	NM_152236.1	NM_152236.1		10634	23065525	NM_152236.1	GAS2L1	NP_689422.1	ILMN_1724059	0005910326	A	2196	ATGCCCTGCACTCAGTCACCCCGAGGGCTGAGCCAGATTCCTGGATGTGA	22	+	28038438-28038486:28038487-28038487	22q12.2a	Homo sapiens growth arrest-specific 2 like 1 (GAS2L1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]		MGC17243; GAR22	MGC17243; GAR22
Homo sapiens	RefSeq	XR_040841.1	ILMN_350521	LOC729810	XR_040841.1	XR_040841.1		729810	169162861	XR_040841.1	LOC729810		ILMN_3305575	0004920646	M	2430	TTCGATCCATGGGGAGACCATAGAAGAATGATCCAAGGAGTTGGGAGGGG	1	+	245564420-245564469	1q44e	PREDICTED: Homo sapiens misc_RNA (LOC729810), miscRNA.					
Homo sapiens	RefSeq	NM_174905.2	ILMN_14944	FAM98C	NM_174905.2	NM_174905.2		147965	37537698	NM_174905.2	FAM98C	NP_777565.2	ILMN_1771870	0006900400	S	903	CAAATGAGCTGGAGCCTCCCATGCCCACCTGGAGGAGCCGAAGAGAGGAT	19	+	43591266-43591315	19q13.2a	Homo sapiens family with sequence similarity 98, member C (FAM98C), mRNA.				FLJ44669	FLJ44669
Homo sapiens	RefSeq	XM_001717643.1	ILMN_351523	LOC100133854	XM_001717643.1	XM_001717643.1		100133854	169214921	XM_001717643.1	LOC100133854	XP_001717695.1	ILMN_3248433	0004560136	S	1	ATGGGCTTCCCAGACTTGGCAGAAGACTCCACCTCTGCGTCCTGCAACTC					PREDICTED: Homo sapiens hypothetical protein LOC100133854 (LOC100133854), mRNA.					
Homo sapiens	RefSeq	XM_927767.1	ILMN_42592	LOC644591	XM_927706.2	XM_927706.2		644591	113411077	XM_927706.2	LOC644591	XP_932799.1	ILMN_1705073	0006420167	S	1243	GTAATGATGGGTACATGACATTATGCGTTTTGCAAAACTCCTAGACCTGT	1	-	142558506-142558555	1q21.1a	PREDICTED: Homo sapiens similar to peptidylprolyl isomerase A (cyclophilin A)-like 4 (LOC644591), mRNA.					
Homo sapiens	RefSeq	XM_927706.1	ILMN_42592	LOC644591	XM_927706.2	XM_927706.2		644591	113411077	XM_927706.2	LOC644591	XP_932799.1	ILMN_1710362	0003140300	S	3719	TGGTGATGAGGGTCTGTAGTCCCAGATACTCAAGAGGCTGAGGTGGGAGG	1	-	142556030-142556079	1q21.1a	PREDICTED: Homo sapiens similar to peptidylprolyl isomerase A (cyclophilin A)-like 4 (LOC644591), mRNA.					
Homo sapiens	RefSeq	NM_003817.1	ILMN_18196	ADAM7	NM_003817.2	NM_003817.2		8756	114326452	NM_003817.2	ADAM7	NP_003808.2	ILMN_1750294	0001260424	S	2401	TGGCCGTGCAAGCTTAGGCTGGGGATTCTGGATGCAACGTCTTTACAACC	8	+	24358319-24358368	8p21.2d-p21.2c	Homo sapiens ADAM metallopeptidase domain 7 (ADAM7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	EAPI; GP-83	EAPI; GP-83
Homo sapiens	RefSeq	NM_002774.3	ILMN_11560	KLK6	NM_002774.3	NM_002774.3		5653	61744422	NM_002774.3	KLK6	NP_002765.1	ILMN_1777541	0006520022	I	130	TCTCTCCTGGGGACACAGAGGTCGGCAGGCAGCACACAGAGGGACCTACG	19	-	56164562-56164611	19q13.33d	Homo sapiens kallikrein-related peptidase 6 (KLK6), transcript variant A, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11668196] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11668196] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 12589961] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 12016211] [evidence NAS]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [pmid 12878203] [evidence NAS]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [pmid 12878203] [evidence NAS]; The regrowth of lost or destroyed tissues [goid 42246] [pmid 12878203] [evidence NAS]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [pmid 11668196] [evidence NAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 11668196] [evidence NAS]; The chemical reactions and pathways involving amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42982] [pmid 12709365] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 11668196] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 12878203] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12878203] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12709365] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12878203] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	PRSS18; Klk7; hK6; SP59; Bssp; MGC9355; NEUROSIN; ZYME; PRSS9	PRSS18; Klk7; hK6; SP59; Bssp; MGC9355; NEUROSIN; ZYME; PRSS9
Homo sapiens	RefSeq	XR_015977.2	ILMN_170765	LOC729209	XR_015977.2	XR_015977.2		729209	169164139	XR_015977.2	LOC729209		ILMN_3306632	0003140255	M	1136	CCCTGGAGACCGTCCAGTGGGACAAGATGTAGAGGTGGAAGACAGTGATA				2p15c	PREDICTED: Homo sapiens misc_RNA (LOC729209), miscRNA.					
Homo sapiens	RefSeq	XM_942309.1	ILMN_42913	LOC652698	XM_942309.1	XM_942309.1		652698	89063819	XM_942309.1	LOC652698	XP_947402.1	ILMN_1785861	0001850133	S	126	GATCCGGTGGGAAGCAGAGGAGGAAGAAGACACAAGGAGATACAGGGCTG					PREDICTED: Homo sapiens similar to Tripartite motif protein 26 (Zinc finger protein 173) (Acid finger protein) (AFP) (RING finger protein 95) (LOC652698), mRNA.					
Homo sapiens	RefSeq	NM_024614.1	ILMN_172424	LOC731366	XM_001132609.1	XM_001132609.1		731366	113416026	XM_001132609.1	LOC731366	XP_001132609.1	ILMN_1759691	0002470332	S	718	GCCCTGGGCTTGGAGTATGCAGAACTGGTTCTTGTTACAACTCCTCTTAC					PREDICTED: Homo sapiens hypothetical protein LOC731366 (LOC731366), mRNA.					
Homo sapiens	RefSeq	NR_029973.1	ILMN_387926	MIR452	NR_029973.1	NR_029973.1		574412	262205491	NR_029973.1	MIR452		ILMN_3309824	0001070379	S	20	TGCAGAGGAAACTGAGACTTTGTAACTATGTCTCAGTCTCATCTGCAAAG				Xq28d	Homo sapiens microRNA 452 (MIR452), microRNA.					
Homo sapiens	RefSeq	XM_001128458.2	ILMN_165173	LOC728779	XM_001128458.2	XM_001128458.2		728779	169167645	XM_001128458.2	LOC728779	XP_001128458.2	ILMN_3305508	0003870332	M	303	TCCTCACATCCCAGACGATGGGCGGCCAGGCAGAGACACTCCTCACTTCC	5	-	75502750-75502799	3q13.11d,5q13.3c	PREDICTED: Homo sapiens hypothetical LOC728779 (LOC728779), mRNA.					
Homo sapiens	RefSeq	XM_932960.1	ILMN_45277	CNTNAP3B	XM_932960.1	XM_932960.1		389734	89029306	XM_932960.1	CNTNAP3B	XP_938053.1	ILMN_1775103	0004880390	I	820	GATCGGAGGGACCTCTCCTGGAGTGAAGGAACGAGGGTCGCTGTCTTGCA	9	+	43855236-43855285		PREDICTED: Homo sapiens contactin associated protein-like 3B, transcript variant 4 (CNTNAP3B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]		
Homo sapiens	RefSeq	NM_006488.1	ILMN_29655	KHK	NM_006488.1	NM_006488.1		3795	5670341	NM_006488.1	KHK	NP_006479.1	ILMN_1717888	0000630427	I	219	TTCCTGGTGGCCGACTTCAGGCGGCGGGGCGTGGACGTGTCTCAGGTGGC	2	+	27171173-27171222	2p23.3a	Homo sapiens ketohexokinase (fructokinase) (KHK), transcript variant b, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 1-phosphate [goid 4454] [pmid 7833921] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NR_015360.1	ILMN_334172	FLJ33630	NR_015360.1	NR_015360.1		644873	168693606	NR_015360.1	FLJ33630		ILMN_3242977	0005220706	S	2611	GCCTGCACATAGTGAGAAGATTGTGCATGATCTGTGAGCTCTACCACACC	5	-	127357536-127357585		Homo sapiens hypothetical LOC644873 (FLJ33630), non-coding RNA.					
Homo sapiens	RefSeq	XM_036729.4	ILMN_167794	USP41	XM_036729.5	XM_036729.5		373856	113429367	XM_036729.5	USP41	XP_036729.4	ILMN_1801931	0000620332	I	1164	GCTTAAAGGCTGTCATCTCTGTGGCCTGCCTCCCCTTTCCCTTCACCCTG	22	-	19027725-19027774	22q11.21d	PREDICTED: Homo sapiens ubiquitin specific peptidase 41 (USP41), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]		
Homo sapiens	RefSeq	XM_937988.1	ILMN_167794	USP41	XM_036729.5	XM_036729.5		373856	113429367	XM_036729.5	USP41	XP_036729.4	ILMN_1690365	0006110020	A	477	TGCCATGGAGAGTAGCAGAAACAGCAGCATGCTCACCCTCCGACTTTCTT	22	-	19053753-19053802	22q11.21d	PREDICTED: Homo sapiens ubiquitin specific peptidase 41 (USP41), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]		
Homo sapiens	RefSeq	NM_001799.2	ILMN_27003	CDK7	NM_001799.2	NM_001799.2		1022	16950659	NM_001799.2	CDK7	NP_001790.1	ILMN_1778917	0005420437	S	986	GGGCCAACACCTGGATGTCAGCTGCCAAGACCAAACTGTCCAGTGGAAAC	5	+	68608159-68608208	5q13.2a	Homo sapiens cyclin-dependent kinase 7 (MO15 homolog, Xenopus laevis, cdk-activating kinase) (CDK7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16109376] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7799941] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16782892] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7629134] [evidence EXP]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 7533895] [evidence TAS]; The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 7533895] [evidence TAS]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7533895] [evidence TAS]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 8692841] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [pmid 8208544] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10801852] [evidence IPI]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]	p39MO15; CDKN7; CAK1; STK1	p39MO15; CDKN7; CAK1; STK1
Homo sapiens	RefSeq	XM_938155.1	ILMN_35253	LOC649071	XM_938155.1	XM_938155.1		649071	88952264	XM_938155.1	LOC649071	XP_943248.1	ILMN_1668706	0006550136	S	7	AAAATAGGTTTGCCAACATGGGCTAGGCCGCCTGCTGGGGAATGCGCTCC					PREDICTED: Homo sapiens similar to solute carrier family 25 member 24 isoform 1 (LOC649071), mRNA.					
Homo sapiens	RefSeq	NM_030809.1	ILMN_23790	CSRNP2	NM_030809.1	NM_030809.1		81566	13540601	NM_030809.1	CSRNP2	NP_110436.1	ILMN_3249110	0001940326	S	3854	GGGTGAGGTTTGCCCACTGTCTCTGCAGGAAGGCTCCGGCTTAATCTAGG	12	-	51455555-51455604	12q13.13b	Homo sapiens cysteine-serine-rich nuclear protein 2 (CSRNP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17726538] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 17726538] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 17726538] [evidence ISS]	FLJ25576; C12orf2; TAIP-12; C12orf22	FLJ25576; C12orf2; TAIP-12; C12orf22
Homo sapiens	RefSeq	NM_030809.1	ILMN_23790	CSRNP2	NM_030809.1	NM_030809.1		81566	13540601	NM_030809.1	CSRNP2	NP_110436.1	ILMN_2187533	0001110372	S	4216	AGCTAGGCCTCTGATCATAGAAGCAGATAGCTTCAGTCCCAGTCTAGGCC	12	-	51455193-51455242	12q13.13b	Homo sapiens cysteine-serine-rich nuclear protein 2 (CSRNP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17726538] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 17726538] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 17726538] [evidence ISS]	FLJ25576; C12orf2; TAIP-12; C12orf22	FLJ25576; C12orf2; TAIP-12; C12orf22
Homo sapiens	RefSeq	XR_001009.1	ILMN_163777	C21ORF87	NM_001040140.1	NM_001040140.1		257357	92373383	NM_001040140.1	C21orf87	NP_001035230.1	ILMN_1683036	0001980095	A	630	ATGTAATTTTCTGCCGGGCTGCTGGCTTGTGGGGGATGTGGCTGGGTCTC	21	-	39608077-39608126	21q22.2b	Homo sapiens chromosome 21 open reading frame 87 (C21orf87), mRNA.					
Homo sapiens	RefSeq	NM_001040140.1	ILMN_163777	C21ORF87	NM_001040140.1	NM_001040140.1		257357	92373383	NM_001040140.1	C21orf87	NP_001035230.1	ILMN_2202320	0003290575	S	947	GTAGAGGACCCAGGTCCCACGGGGGGCGGCGGTGAATCGCCCCCTCTTGT	21	-	39607760-39607775:39607776-39607809	21q22.2b	Homo sapiens chromosome 21 open reading frame 87 (C21orf87), mRNA.					
Homo sapiens	RefSeq	XM_931729.1	ILMN_39935	LOC643665	XM_931729.2	XM_931729.2		643665	113414563	XM_931729.2	LOC643665	XP_936822.2	ILMN_1664118	0005820730	S	248	TGCTTGCTCCTCCTCTCCCCCAGCCCTTCCCCTCCGTGACCTACCCACTC	3	+	85091008-85091057	3p12.1b	PREDICTED: Homo sapiens hypothetical LOC643665 (LOC643665), mRNA.					
Homo sapiens	RefSeq	NM_007214.3	ILMN_183908	SEC63	NM_007214.3	NM_007214.3		11231	47458818	NM_007214.3	SEC63	NP_009145.1	ILMN_2136068	0004290598	S	3540	CCCAGGAGTGAGAGGGATTTCCCCTCATAGTACAACTGGAAGGATAGTGC	6	-	108298474-108298523	6q21d	Homo sapiens SEC63 homolog (S. cerevisiae) (SEC63), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10799540] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 10799540] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10799540] [evidence TAS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	SEC63L; PRO2507; ERdj2	SEC63L; PRO2507; ERdj2
Homo sapiens	RefSeq	NM_007214.3	ILMN_183908	SEC63	NM_007214.3	NM_007214.3		11231	47458818	NM_007214.3	SEC63	NP_009145.1	ILMN_1763989	0007160521	S	2363	AGTGGGATACAGCAATAGAGGGGGATGAAGACCAGGAGGACAGTGAGGGC	6	-	108299651-108299700	6q21d	Homo sapiens SEC63 homolog (S. cerevisiae) (SEC63), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10799540] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 10799540] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10799540] [evidence TAS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	SEC63L; PRO2507; ERdj2	SEC63L; PRO2507; ERdj2
Homo sapiens	RefSeq	NM_173362.2	ILMN_26427	RFESD	NM_173362.2	NM_173362.2		317671	40255164	NM_173362.2	RFESD	NP_775498.1	ILMN_1802162	0000540703	S	1277	GGACACTCTACTGATCTTGCCTCTCTACAACCTCTCTTCCACCTGACCTC	5	+	95013678-95013727	5q15c	Homo sapiens Rieske (Fe-S) domain containing (RFESD), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]		
Homo sapiens	RefSeq	XM_933036.1	ILMN_43893	LOC645663	XM_933036.1	XM_933036.1		645663	89057853	XM_933036.1	LOC645663	XP_938129.1	ILMN_1812806	0002810181	S	254	CAGATAGGCCCTGGGGTGACGAAAACTCTCCCTGGACCCCATACCTGTGT	20	-	30258889-30258938		PREDICTED: Homo sapiens hypothetical protein LOC645663 (LOC645663), mRNA.					
Homo sapiens	RefSeq	NM_001080503.1	ILMN_181800	LOC126075	NM_001080503.1	NM_001080503.1		126075	122937443	NM_001080503.1	LOC126075	NP_001073972.1	ILMN_2271699	0001430296	I	203	CCGGGTTCTCAGCGTGACATTCCAGAGCAAACACAGCTCCCCATTACTCT	19	+	11318536-11318585	19p13.2b	Homo sapiens hypothetical protein LOC126075 (LOC126075), mRNA.					
Homo sapiens	RefSeq	NM_018438.4	ILMN_164802	FBXO6	NM_018438.4	NM_018438.4		26270	48995170	NM_018438.4	FBXO6	NP_060908.1	ILMN_1701455	0003800398	S	1105	GACTCCTGCCCCGGTTCAACCCTACCAGCTTGTGGTAACTTACTGTCACA	1	+	11656583-11656632	1p36.22b	Homo sapiens F-box protein 6 (FBXO6), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fbx6b; FBG2; FBX6; FBS2	Fbx6b; FBG2; FBX6; FBS2
Homo sapiens	RefSeq	NM_015509.2	ILMN_27077	NECAP1	NM_015509.2	NM_015509.2		25977	31542527	NM_015509.2	NECAP1	NP_056324.2	ILMN_1726359	0002640114	S	2283	CATTGCCTCCTTTTCCAGGCAGCTCTATTCTTGCAGAGCCATAGCAGGAC	12	+	8141354-8141403	12p13.31c-p13.31b	Homo sapiens NECAP endocytosis associated 1 (NECAP1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A clathrin coat found on a vesicle [goid 30125] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A clathrin coat found on a vesicle [goid 30125] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZP566B183; MGC131900	DKFZP566B183; MGC131900
Homo sapiens	RefSeq	XM_928532.1	ILMN_38571	LOC645508	XM_928532.1	XM_928532.1		645508	89025625	XM_928532.1	LOC645508	XP_933625.1	ILMN_1777046	0006660138	S	67	CAGATCTGCGAGGTGGCCTCGGGAGTGGCCCGCATTCGTGGGAAGACGCT	7	-	535-584		PREDICTED: Homo sapiens similar to C-terminal binding protein 2 (LOC645508), mRNA.					
Homo sapiens	RefSeq	NM_000926.2	ILMN_162587	PGR	NM_000926.3	NM_000926.3		5241	110611913	NM_000926.3	PGR	NP_000917.3	ILMN_1811014	0006040445	S	4124	CTGCTTGAATACATTTATCCAGTCCCGGGCACTGAGTGTTGAATTTCCAG	11	-	100415139-100415188	11q22.1d	Homo sapiens progesterone receptor (PGR), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IEA]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1557371] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 1557371] [evidence TAS]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; Any process that modulates the frequency, rate or extent of epithelial cell proliferation [goid 50678] [evidence IEA]; Any series of molecular signals generated as a consequence of a progesterone binding to its receptor [goid 50847] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [pmid 10840043] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 12771131] [evidence IPI]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 12917342] [evidence IPI]	PR; NR3C3	PR; NR3C3
Homo sapiens	RefSeq	NR_003366.2	ILMN_163350	ANKRD20B	NR_003366.2	NR_003366.2		729171	148539617	NR_003366.2	ANKRD20B		ILMN_3307747	0000770725	S	3615	AGGGAATGTCAACCCTGCAGTGGGAGCCCATCACGCATCCTAGGCACAGA	2	-	95426678-95426727	2q11.1b	Homo sapiens ankyrin repeat domain 20B (ANKRD20B), non-coding RNA.				DKFZp686H1631	DKFZp686H1631
Homo sapiens	RefSeq	NM_052851.1	ILMN_3346	STARD13	NM_052851.1	NM_052851.1		90627	16445030	NM_052851.1	STARD13	NP_443083.1	ILMN_1786498	0000290270	I	34	TAGCTGGCAGAGATAACGAAGAGAAAACACTCGGTGACAGATGCACCATC	13	-	32678060-32678109	13q13.1b	Homo sapiens StAR-related lipid transfer (START) domain containing 13 (STARD13), transcript variant gamma, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; The single layer of phopholipids surrounding a lipid storage body [goid 34430] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14697242] [evidence IPI]	FLJ37385; DLC2; GT650	FLJ37385; DLC2; GT650
Homo sapiens	RefSeq	XM_943794.1	ILMN_35555	FLJ42709	XM_943794.1	XM_943794.1		441094	88988399	XM_943794.1	FLJ42709	XP_948887.1	ILMN_1770269	0004050010	A	3539	TGTAACAGGCTGAATCGCCCCACTCCCAAACTCCTGGTCGTGATACTGGA					PREDICTED: Homo sapiens hypothetical gene supported by AK124699 (FLJ42709), mRNA.					
Homo sapiens	RefSeq	XR_037325.1	ILMN_336267	LRRC9	XR_037325.1	XR_037325.1		341883	169207757	XR_037325.1	LRRC9		ILMN_3298220	0001340377	M	4375	CCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCC				14q23.1c	PREDICTED: Homo sapiens misc_RNA (LRRC9), miscRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_171846.1	ILMN_22821	LACTB	NM_171846.1	NM_171846.1		114294	26051232	NM_171846.1	LACTB	NP_741982.1	ILMN_1693830	0005900524	I	1252	CAACCTGCCACATTTTGGGAGCTTTTCTACATGTCTGTTTTCTCATCTGT	15	+	61208997-61209046	15q22.2b	Homo sapiens lactamase, beta (LACTB), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ14902; G24; MRPL56	FLJ14902; G24; MRPL56
Homo sapiens	RefSeq	NM_002799.2	ILMN_3213	PSMB7	NM_002799.2	NM_002799.2		5695	23110926	NM_002799.2	PSMB7	NP_002790.1	ILMN_1814156	0001780543	S	692	GCTGGATTTTCTCCGCCCATACACAGTGCCCAACAAGAAGGGGACCAGGC	9	-	127115986-127115988:127119043-127119089	9q33.3a	Homo sapiens proteasome (prosome, macropain) subunit, beta type, 7 (PSMB7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Z	Z
Homo sapiens	RefSeq	XM_927043.1	ILMN_33332	LOC643755	XM_927043.1	XM_927043.1		643755	89035699	XM_927043.1	LOC643755	XP_932136.1	ILMN_1669315	0003780484	S	214	GCTGTTAGTGCGATCTTCAGCCAGTCGTCCCAGTCAGACACTTCTGTTGG	12	+	97338252-97338301		PREDICTED: Homo sapiens hypothetical protein LOC643755 (LOC643755), mRNA.					
Homo sapiens	RefSeq	XM_936044.1	ILMN_170782	LOC730953	XM_001128891.1	XM_001128891.1		730953	113419230	XM_001128891.1	LOC730953	XP_001128891.1	ILMN_1658697	0005130017	S	608	TTTTGTCTCATGGCAACCTTCCCTGGCCAGATTCCTGCCTGTCTCCCAGC					PREDICTED: Homo sapiens hypothetical protein LOC730953 (LOC730953), mRNA.					
Homo sapiens	RefSeq	XR_078513.1	ILMN_375879	PKD1P1	XR_078513.1	XR_078513.1		339044	239745438	XR_078513.1	PKD1P1		ILMN_3308683	0003310047	S	1463	GGCTTCCATGGGTGTCTCTGGTGAAATTTGCTTTCTGTTTCATGGGCTGC				16p13.11a	PREDICTED: Homo sapiens polycystic kidney disease 1 (autosomal dominant) pseudogene 1 (PKD1P1), miscRNA.					
Homo sapiens	RefSeq	XM_208333.5	ILMN_45381	MGC48637	XM_208333.6	XM_208333.6		285622	113416673	XM_208333.6	MGC48637	XP_208333.3	ILMN_1747269	0004390608	I	1828	GGACAACTGACCTGTCTCCTTCAAACAGTCCATGTCACCACCAAGAACAC	5	+	85628313-85628362	5q14.3c	PREDICTED: Homo sapiens hypothetical protein MGC48637 (MGC48637), mRNA.					
Homo sapiens	RefSeq	NM_001714.2	ILMN_13964	BICD1	NM_001714.2	NM_001714.2		636	51039801	NM_001714.2	BICD1	NP_001705.2	ILMN_1692973	0000060048	I	2796	CCAAGGGCACCGGCTCAGCAAGGAAAAAAGGTTAACCGTGGCTCCACCAG	12	+	32378824-32378868:32381700-32381704	12p11.21a	Homo sapiens bicaudal D homolog 1 (Drosophila) (BICD1), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9367685] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 9367685] [evidence TAS]; Any process by which mRNA is transported to, or maintained in, a specific location within the cell [goid 8298] [pmid 9367685] [evidence NAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9367685] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9367685] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BICD	BICD
Homo sapiens	RefSeq	NM_017974.3	ILMN_25151	ATG16L1	NM_017974.3	NM_017974.3		55054	124256477	NM_017974.3	ATG16L1	NP_060444.3	ILMN_2365881	0003420347	A	2924	GCACAGCAGCGCCATCTTTCCGTTTCAGGGGTTGTGATGAAGGCCAAGGA	2	+	233868635-233868684	2q37.1d	Homo sapiens ATG16 autophagy related 16-like 1 (S. cerevisiae) (ATG16L1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 15620219] [evidence ISS]; A cellular membrane associated with the pre-autophagosomal structure [goid 34045] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 15620219] [evidence NAS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 15620219] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	ATG16L; APG16L; IBD10; WDR30; FLJ00045; FLJ10035; FLJ10828; FLJ22677	ATG16L; APG16L; IBD10; WDR30; FLJ00045; FLJ10035; FLJ10828; FLJ22677
Homo sapiens	RefSeq	XR_016516.2	ILMN_173279	KRT18P17	XR_016516.2	XR_016516.2		344866	169165058	XR_016516.2	KRT18P17		ILMN_3194291	0000540370	A	751	GGCAGATATCCAAGCCCAATATGACAAGCTGGCTCAGAAGAACCAAGAGG	3	-	12804376-12804425	3p25.1d	PREDICTED: Homo sapiens misc_RNA (KRT18P17), miscRNA.					
Homo sapiens	RefSeq	NM_152554.1	ILMN_26331	C6ORF195	NM_152554.1	NM_152554.1		154386	22749154	NM_152554.1	C6orf195	NP_689767.1	ILMN_2220772	0004780746	S	2004	GGACAACACCAAGAGGGAACCCTGCTATAAACTGTGGCCTCTGTGCGATC	6	-	2567526-2567575	6p25.2b	Homo sapiens chromosome 6 open reading frame 195 (C6orf195), mRNA.				MGC120321; MGC120322; MGC120323; bA145H9.2; RP11-145H9.2; FLJ31934	MGC120321; MGC120322; MGC120323; bA145H9.2; RP11-145H9.2; FLJ31934
Homo sapiens	RefSeq	XM_926518.1	ILMN_38519	LOC643146	XM_926518.1	XM_926518.1		643146	89038652	XM_926518.1	LOC643146	XP_931611.1	ILMN_1663273	0002060730	S	61	AATTGGGACCCAAATTCCTCAGGTGGAAGGAGAGCCTTGGACGATTTTCA	15	+	86886525-86886574		PREDICTED: Homo sapiens hypothetical protein LOC643146 (LOC643146), mRNA.					
Homo sapiens	RefSeq	XM_933715.1	ILMN_31224	LOC646574	XM_933715.1	XM_933715.1		646574	89038448	XM_933715.1	LOC646574	XP_938808.1	ILMN_1660504	0002900465	S	267	CGGGGGAGCGTCCGCGTCCCTCGGAGTGTCCAGGCTAGCGACCGAGACAC	15	-	68178342-68178391	15q23b	PREDICTED: Homo sapiens hypothetical LOC646574 (LOC646574), mRNA.					
Homo sapiens	RefSeq	NM_001013643.1	ILMN_13124	C1ORF137	NM_001013643.1	NM_001013643.1		388667	61966734	NM_001013643.1	C1orf137	NP_001013665.1	ILMN_1723256	0005870402	S	118	ATCCAAATGAGGCAACATCACCATCAGTCCTCCTTCCCTGGCTCACTGCC	1	+	117038935-117038984	1p13.1b	Homo sapiens chromosome 1 open reading frame 137 (C1orf137), mRNA.					
Homo sapiens	RefSeq	XM_001714359.1	ILMN_339080	LOC100132738	XM_001714359.1	XM_001714359.1		100132738	169163280	XM_001714359.1	LOC100132738	XP_001714411.1	ILMN_3238916	0003440768	S	1456	CTCACTATTGCAGCACCGACAAGGGGCACCGACATGGGGACGCTCACTAT	2	+	3163708-3163757	2p25.3b	PREDICTED: Homo sapiens similar to hCG1817845 (LOC100132738), mRNA.					
Homo sapiens	RefSeq	XM_941300.1	ILMN_40818	LOC652003	XM_941300.1	XM_941300.1		652003	89025696	XM_941300.1	LOC652003	XP_946393.1	ILMN_1656635	0002370215	S	1025	CACCCAGCCGTCCAGGACGGGGACCCACAGTGGGTGCTGGTGGACCATAA					PREDICTED: Homo sapiens similar to Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H) (LOC652003), mRNA.					
Homo sapiens	RefSeq	NM_014065.2	ILMN_165646	ASTE1	NM_014065.2	NM_014065.2		28990	33469986	NM_014065.2	ASTE1	NP_054784.2	ILMN_1803813	0006650026	S	2373	GAGGGAGAACCACTGCACACACCAAGTGTTGGTATGAGGGAAACAACCGG	3	-	132215650-132215699	3q22.1a	Homo sapiens asteroid homolog 1 (Drosophila) (ASTE1), mRNA.		The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]	HT001; MGC129980	HT001; MGC129980
Homo sapiens	RefSeq	NM_001158.3	ILMN_15833	AOC2	NM_001158.3	NM_001158.3		314	60498981	NM_001158.3	AOC2	NP_001149.2	ILMN_1741431	0004230307	A	2314	CCCCAGATTCCCACCCCCTCAATGTTCCTCTCACACGAAACCCCCATCAG	17	+	38255980-38256029	17q21.31a	Homo sapiens amine oxidase, copper containing 2 (retina-specific) (AOC2), transcript variant 1, mRNA.		The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9119395] [evidence TAS]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9119395] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [evidence IEA]	DAO2; RAO	DAO2; RAO
Homo sapiens	RefSeq	NM_001158.3	ILMN_15833	AOC2	NM_001158.3	NM_001158.3		314	60498981	NM_001158.3	AOC2	NP_001149.2	ILMN_2405185	0004290180	A	1865	GTCACAGAGCAGTAGCATCTATCACCAGAATGACATCTGGACACCCACAG	17	+	38255180-38255229	17q21.31a	Homo sapiens amine oxidase, copper containing 2 (retina-specific) (AOC2), transcript variant 1, mRNA.		The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9119395] [evidence TAS]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9119395] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [evidence IEA]	DAO2; RAO	DAO2; RAO
Homo sapiens	RefSeq	NM_031933.1	ILMN_31413	WNT8A	NM_058244.2	NM_058244.2		7478	89111138	NM_058244.2	WNT8A	NP_490645.1	ILMN_1727252	0006660546	A	891	GAGTGTGGGCTGCAGGTGGAAGAGAGGAAAACTGAGGTCATAAGCAGCTG	5	+	137426592-137426641	5q31.2c	Homo sapiens wingless-type MMTV integration site family, member 8A (WNT8A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	WNT8D	WNT8D
Homo sapiens	RefSeq	NM_058244.1	ILMN_31413	WNT8A	NM_058244.2	NM_058244.2		7478	89111138	NM_058244.2	WNT8A	NP_490645.1	ILMN_1663997	0002490307	I	1251	GGAACCTGGGCCTCCTGACTTTGGCAGACCCCCATTTCATCTTTCCTGCA	5	+	137426952-137427001	5q31.2c	Homo sapiens wingless-type MMTV integration site family, member 8A (WNT8A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	WNT8D	WNT8D
Homo sapiens	RefSeq	NM_006541.3	ILMN_13525	GLRX3	NM_006541.3	NM_006541.3		10539	142379276	NM_006541.3	GLRX3	NP_006532.2	ILMN_3247462	0000580129	S	567	TCTCAGATGAAGAGGTTCGACAGGGACTCAAAGCCTATTCCAGTTGGCCT	10	+	131854827-131854876	10q26.3b	Homo sapiens glutaredoxin 3 (GLRX3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10636891] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]	GRX4; TXNL3; bA500G10.4; GLRX4; FLJ11864; GRX3; TXNL2; PICOT	PICOT
Homo sapiens	RefSeq	NM_002233.2	ILMN_20901	KCNA4	NM_002233.2	NM_002233.2		3739	25952084	NM_002233.2	KCNA4	NP_002224.1	ILMN_1651900	0003830039	S	3099	GGAGACTGATGTGTGAATCTTTTTCCACCTGCCACTGCTCCCCCCTCAGC	11	-	30032229-30032263:30032264-30032278	11p14.1b	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, member 4 (KCNA4), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 2001794] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 2001794] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [pmid 2001794] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9786987] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	HPCN2; HBK4; HUKII; KCNA4L; KV1.4; PCN2; KCNA8; HK1	HPCN2; HBK4; HUKII; KCNA4L; KV1.4; PCN2; KCNA8; HK1
Homo sapiens	RefSeq	NM_017966.4	ILMN_919	VPS37C	NM_017966.4	NM_017966.4		55048	57863313	NM_017966.4	VPS37C	NP_060436.4	ILMN_1789233	0006510528	S	2595	CTAATGGACTCTACTGGTTTGAGTGCTTCTGAGCTGGATGACCGACCGCC	11	-	60897775-60897824	11q12.2b	Homo sapiens vacuolar protein sorting 37 homolog C (S. cerevisiae) (VPS37C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		FLJ20847	FLJ20847
Homo sapiens	RefSeq	NM_203412.1	ILMN_15157	UBL4B	NM_203412.1	NM_203412.1		164153	44662818	NM_203412.1	UBL4B	NP_981957.1	ILMN_1806394	0004200091	S	1277	TCAGCAAAGTCATACACTCCCTGTGGCCAGCGTGAACAGAGCCATGCCCC	1	+	110457861-110457910	1p13.3a	Homo sapiens ubiquitin-like 4B (UBL4B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		FLJ25690	FLJ25690
Homo sapiens	RefSeq	NM_000623.2	ILMN_7984	BDKRB2	NM_000623.2	NM_000623.2		624	17352499	NM_000623.2	BDKRB2	NP_000614.1	ILMN_1684086	0002320719	S	4034	CCGCCTTGCACACTCAGAAGCCTTTGGGAAGGGGTGCTATTCATTTCTGC	14	+	95780313-95780362	14q32.2a	Homo sapiens bradykinin receptor B2 (BDKRB2), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 17077303] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10653985] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7916737] [evidence TAS]	A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 17077303] [evidence IC ]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 17077303] [evidence IC ]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 10653985] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 1314587] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10653985] [evidence TAS]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 17077303] [evidence IC ]; Any process that modulates the extent to which blood vessels can be pervaded by fluid [goid 43114] [pmid 17077303] [evidence IC ]; The regulated release of arachidonic acid from a cell or group of cells [goid 50482] [pmid 17077303] [evidence IDA]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 17077303] [evidence IPI]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [pmid 8302267] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [pmid 8302267] [evidence TAS]; Interacting selectively with a type 1 angiotensin receptor [goid 31702] [pmid 10993080] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10993080] [evidence IPI]	DKFZp686O088; BRB2; BK-2; BK2; B2R; BKR2	DKFZp686O088; BRB2; BK-2; BK2; B2R; BKR2
Homo sapiens	RefSeq	XM_001716369.1	ILMN_335109	LOC100134067	XM_001716369.1	XM_001716369.1		100134067	169167714	XM_001716369.1	LOC100134067	XP_001716421.1	ILMN_3235799	0001340240	S	748	AGGTGGGAGGTGACTGTGATGGCCGTCGACTGCGTGCCCGGGAGGTGGGA					PREDICTED: Homo sapiens hypothetical LOC100134067 (LOC100134067), mRNA.					
Homo sapiens	RefSeq	NM_173549.1	ILMN_19462	C8ORF47	NM_173549.1	NM_173549.1		203111	27734896	NM_173549.1	C8orf47	NP_775820.1	ILMN_1670975	0005690278	S	745	AGCTGGAGAGCTACAACCTCAGGGCACAGTGGGAAAGGATGAGCAGGCCC	8	+	99101842-99101891	8q22.2a	Homo sapiens chromosome 8 open reading frame 47 (C8orf47), mRNA.				FLJ39553	FLJ39553
Homo sapiens	RefSeq	XM_943587.1	ILMN_137385	GAK	XM_943587.1	XM_943587.1		2580	88978830	XM_943587.1	GAK	XP_948680.1	ILMN_1672906	0002970187	I	1359	CAGATAGATGCCGTCTCTGCCCACACGTAGCCTGCTCTCACCCTGTGTCT				4p16.3c	PREDICTED: Homo sapiens cyclin G associated kinase, transcript variant 3 (GAK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9299234] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]		
Homo sapiens	Unigene	Hs.519750	ILMN_99646	HS.519750	Hs.519750		Hs.519750		34531894	AK125708			ILMN_1832033	0004850706	S	1875	GCCAGGCTAGTGGCTACCAAATTGTACATAGAGCCCTCGCACCTCTTATT	5	-	169668538-169668587		Homo sapiens cDNA FLJ43720 fis, clone TESOP2006068					
Homo sapiens	RefSeq	NM_032594.2	ILMN_3487	INSM2	NM_032594.3	NM_032594.3		84684	145309321	NM_032594.3	INSM2	NP_115983.3	ILMN_1795388	0001300521	S	2926	GCCAGTTTGGGACATTGGCTGAGCACTGCCTGACAGAAAGCCCGTATTTG	14	+	35075924-35075973	14q13.2b	Homo sapiens insulinoma-associated 2 (INSM2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	mlt1; IA-6	mlt1; IA-6
Homo sapiens	RefSeq	NM_144984.1	ILMN_5468	C10ORF72	NM_144984.1	NM_144984.1		196740	21450676	NM_144984.1	C10orf72	NP_659421.1	ILMN_1664741	0004060487	I	1714	GGGGCTCCACATCCAGCTTTCATCTTCCATCAATGCCTTCTTTGGGCATG	10	-	49980629-49980678	10q11.22d	Homo sapiens chromosome 10 open reading frame 72 (C10orf72), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC44086; FLJ31737	MGC44086; FLJ31737
Homo sapiens	RefSeq	NM_203404.1	ILMN_20710	AMPD2	NM_203404.1	NM_203404.1		271	55925573	NM_203404.1	AMPD2	NP_981949.1	ILMN_1696830	0001170474	I	170	AGACTCTGTAGGAGAGTGCCCGAGGGCGGAGGGCCAGCCATGCTGACCTT	1	+	109969741-109969779:109969780-109969790	1p13.3b	Homo sapiens adenosine monophosphate deaminase 2 (isoform L) (AMPD2), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6163] [evidence NAS]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [pmid 8764830] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NR_002141.1	ILMN_12820	OR2M1P	NR_002141.1	NR_002141.1		388762	46395480	NR_002141.1	OR2M1P		ILMN_1741872	0000650368	S	569	TGTACATACAGCCCACATCTGATCGCTCCCCAACGCAGGACAAGCTGGTG	1	+	246352629-246352678	1q44f	Homo sapiens olfactory receptor, family 2, subfamily M, member 1 pseudogene (OR2M1P), non-coding RNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	JCG10; OST037; OR2M1	JCG10; OST037; OR2M1
Homo sapiens	RefSeq	NR_002141.1	ILMN_12820	OR2M1P	NR_002141.1	NR_002141.1		388762	46395480	NR_002141.1	OR2M1P		ILMN_2194148	0004060593	S	510	CACGACCTGTTCCTCTCACCTCATGGTGGTGGGAATGTTCTATGGAGCAG	1	+	246352570-246352619	1q44f	Homo sapiens olfactory receptor, family 2, subfamily M, member 1 pseudogene (OR2M1P), non-coding RNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	JCG10; OST037; OR2M1	JCG10; OST037; OR2M1
Homo sapiens	RefSeq	NM_152221.2	ILMN_15649	CSNK1E	NM_152221.2	NM_152221.2		1454	40549400	NM_152221.2	CSNK1E	NP_689407.1	ILMN_1708858	0006250100	A	2321	GCCGGTGGCAGCTCCATCTTCCATTCCTGGTTTTAGGGCAGAATCCATGG	22	-	38687118-38687167	22q13.1b	Homo sapiens casein kinase 1, epsilon (CSNK1E), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 7797465] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7797465] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7797465] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 7797465] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17218255] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HCKIE; MGC10398	MGC10398; HCKIE
Homo sapiens	RefSeq	NM_001774.1	ILMN_20101	CD37	NM_001774.1	NM_001774.1		951	4502662	NM_001774.1	CD37	NP_001765.1	ILMN_1786176	0003800373	S	617	CGGCGACCAACGACTCCACAATCCTAGATAAGGTGATCTTGCCCCAGCTC	19	+	54533875-54533924	19q13.33a	Homo sapiens CD37 antigen (CD37), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8436422] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2466944] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2466944] [evidence TAS]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 2466944] [evidence TAS]		TSPAN26; GP52-40; MGC120234	TSPAN26; GP52-40; MGC120234
Homo sapiens	RefSeq	NM_017594.3	ILMN_167720	DIRAS2	NM_017594.3	NM_017594.3		54769	46198305	NM_017594.3	DIRAS2	NP_060064.2	ILMN_2155816	0003180491	S	3847	CCTTGAAGACACATCCTGGAATTCATACCCCACAAGGACAGTGTGTATAC	9	-	93372324-93372373	9q22.2b	Homo sapiens DIRAS family, GTP-binding RAS-like 2 (DIRAS2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Di-Ras2; DKFZp761C07121	Di-Ras2; DKFZp761C07121
Homo sapiens	RefSeq	XM_001714301.1	ILMN_335992	LOC285296	XM_001714301.1	XM_001714301.1		285296	169165513	XM_001714301.1	LOC285296	XP_001714353.1	ILMN_3236463	0007150082	S	925	TGGGTCACCTCTGGGCTTCCGCAGCACCCTCCAAGGCGGAGTGGAGCCTT				3p12.3d	PREDICTED: Homo sapiens similar to hCG2036843 (LOC285296), mRNA.					
Homo sapiens	RefSeq	NM_000582.2	ILMN_9394	SPP1	NM_000582.2	NM_000582.2		6696	38146097	NM_000582.2	SPP1	NP_000573.1	ILMN_1651354	0003460070	S	806	GTCAGCTGGATGACCAGAGTGCTGAAACCCACAGCCACAAGCAGTCCAGA	4	+	88903786-88903835	4q22.1b	Homo sapiens secreted phosphoprotein 1 (SPP1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BNSP; BSPI; OPN; MGC110940; ETA-1	BNSP; BSPI; OPN; MGC110940; ETA-1
Homo sapiens	RefSeq	NM_001042762.1	ILMN_182635	FIGNL1	NM_001042762.1	NM_001042762.1		63979	112789542	NM_001042762.1	FIGNL1	NP_001036227.1	ILMN_2389114	0006100372	A	2191	GAGCAGACATGACACAGCTTTGCAGGGAGGCTTCTCTTGGTCCTATTCGC	7	-	50513122-50513171	7p12.2a	Homo sapiens fidgetin-like 1 (FIGNL1), transcript variant 1, mRNA.		The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence ISS]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Homo sapiens	RefSeq	NM_022116.2	ILMN_182635	FIGNL1	NM_001042762.1	NM_001042762.1		63979	112789542	NM_001042762.1	FIGNL1	NP_001036227.1	ILMN_1778152	0005890593	S	2190	GGAGCAGACATGACACAGCTTTGCAGGGAGGCTTCTCTTGGTCCTATTCG	7	-	50513123-50513172	7p12.2a	Homo sapiens fidgetin-like 1 (FIGNL1), transcript variant 1, mRNA.		The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence ISS]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Homo sapiens	Unigene	Hs.577647	ILMN_129828	HS.577647	Hs.577647		Hs.577647		8008427	AW874290			ILMN_1907469	0003930373	S	198	CCCCAGTGCGCATGTGGGCATGTTTAGGCAAGCCCCCTGTACAAGTTCCT					hq04d04.x1 NCI_CGAP_Ut7 Homo sapiens cDNA clone IMAGE:3118375 3 similar to contains PTR7.t1 PTR7 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	XM_930444.1	ILMN_36480	TP53TG3	NM_016212.2	NM_016212.2		24150	89001103	NM_016212.2	TP53TG3	NP_057296.1	ILMN_1699389	0000110113	I	876	AATTGTGACACCCTGTCTCCTCGAGCTGCAGGCTTTTATGCTTGTCATGT	16	-	32687128-32687177	16p11.2b	Homo sapiens TP53 target 3 (TP53TG3), mRNA.				TP53TG3A	
Homo sapiens	RefSeq	NM_016212.2	ILMN_36480	TP53TG3	NM_016212.2	NM_016212.2		24150	89001103	NM_016212.2	TP53TG3	NP_057296.1	ILMN_2159152	0006060376	S	1949	TCACGTGTCTTCACGCATCCCTTGAATTGGAAATTGTGCCCTGGAGACTG	16	-	32684884-32684933	16p11.2b	Homo sapiens TP53 target 3 (TP53TG3), mRNA.				TP53TG3A	TP53TG3A
Homo sapiens	RefSeq	NM_001006630.1	ILMN_16899	CHRM2	NM_001006627.1	NM_001006627.1		1129	54792106	NM_001006627.1	CHRM2	NP_001006628.1	ILMN_1729402	0006960128	A	409	GATCGGCCCTGAACCCACAAAGGACTCCTCGCTCCTTCAAGCCTCCACCA	7	+	136204615-136204664	7q33d	Homo sapiens cholinergic receptor, muscarinic 2 (CHRM2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3443095] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3037705] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 8139539] [evidence TAS]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7207] [pmid 2739737] [evidence TAS]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 2739737] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 10544184] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4981] [pmid 9603968] [evidence TAS]	MGC120006; FLJ43243; MGC120007; HM2	MGC120006; FLJ43243; MGC120007; HM2
Homo sapiens	RefSeq	NM_006722.1	ILMN_1803	MITF	NM_006722.1	NM_006722.1		4286	38156700	NM_006722.1	MITF	NP_006713.1	ILMN_1657854	0005560066	I	10	TCCGCTCCATCTCTGAAGTCAAATGGGACACCTTGAAAATACTTCAGTGG	3	+	69812971-69812992:69812993-69813020	3p14.1a	Homo sapiens microphthalmia-associated transcription factor (MITF), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9647758] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10578055] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9647758] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10578055] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [pmid 9647758] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9647758] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10578055] [evidence NAS]	WS2A	WS2A
Homo sapiens	RefSeq	NM_020444.3	ILMN_15219	KIAA1191	NM_020444.3	NM_020444.3		57179	119120886	NM_020444.3	KIAA1191	NP_065177.2	ILMN_2376133	0007570465	A	2694	AGTACCTTGTCTGTATAAGAAGCTGGCCTTTCCATAGAGAGGCCCTGGAG	5	-	175773149-175773198	5q35.2d	Homo sapiens KIAA1191 (KIAA1191), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ21022	FLJ21022
Homo sapiens	RefSeq	NM_003855.2	ILMN_179308	IL18R1	NM_003855.2	NM_003855.2		8809	27477086	NM_003855.2	IL18R1	NP_003846.1	ILMN_1781700	0001570367	S	3076	GACTGTGAAACCGTCAGTTCGGAAGGCTGGTTAGAACATGTGGGAGCAAC	2	+	102381204-102381253	2q12.1a	Homo sapiens interleukin 18 receptor 1 (IL18R1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9325300] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9325300] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]	IL-1Rrp; IL1RRP; CDw218a	CD218a; IL-1Rrp; IL1RRP; CDw218a
Homo sapiens	RefSeq	NM_198993.2	ILMN_28417	STAC2	NM_198993.2	NM_198993.2		342667	75812909	NM_198993.2	STAC2	NP_945344.1	ILMN_1718295	0000070086	S	2901	CCTCCCCCAAGCTCAGATCCTCCTCTTATGCCCTTGATTGTGCCAGCCCA	17	-	37367049-37367098	17q12c	Homo sapiens SH3 and cysteine rich domain 2 (STAC2), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	24b2; 24b2/STAC2; MGC129694	24b2; 24b2/STAC2; MGC129694
Homo sapiens	RefSeq	NM_003884.3	ILMN_22596	PCAF	NM_003884.3	NM_003884.3		8850	40805842	NM_003884.3	PCAF	NP_003875.3	ILMN_1733802	0002750070	S	4302	ACAGTTGCCAGTGATAATCTGCATGAAGGAAAAAGAACCCTGCAAATGGC	3	+	20170378-20170427	3p24.3c-p24.3b	Homo sapiens p300/CBP-associated factor (PCAF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10891508] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11250901] [evidence EXP]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 10365964] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6473] [pmid 8684459] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8684459] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8684459] [evidence IDA]; The acetylation of the N-terminal lysine of proteins [goid 18076] [pmid 12435739] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 12435739] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 12887892] [evidence IPI]	GCN5L; GCN5L1; GCN5; P; P/CAF; CAF	GCN5L; GCN5L1; GCN5; P; P/CAF; CAF
Homo sapiens	RefSeq	NM_001077188.1	ILMN_182242	HS6ST2	NM_001077188.1	NM_001077188.1		90161	116295255	NM_001077188.1	HS6ST2	NP_001070656.1	ILMN_2298755	0006270048	I	1428	GCAGGCGCCAACTCTCCGTCATCCACAAAGACCCGGAACACATCTAAGAG	X	-	131922979-131923028	Xq26.2a-q26.2b	Homo sapiens heparan sulfate 6-O-sulfotransferase 2 (HS6ST2), transcript variant L, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC130022; MGC130023	MGC130022; MGC130023
Homo sapiens	RefSeq	NM_001077188.1	ILMN_182242	HS6ST2	NM_001077188.1	NM_001077188.1		90161	116295255	NM_001077188.1	HS6ST2	NP_001070656.1	ILMN_2415583	0000830491	A	3779	CCACTGTGCTGTCAAGCATCATGATTCCGGGCAGTTTTCATTTTACTGTG	X	-	131762139-131762188	Xq26.2a-q26.2b	Homo sapiens heparan sulfate 6-O-sulfotransferase 2 (HS6ST2), transcript variant L, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC130022; MGC130023	MGC130022; MGC130023
Homo sapiens	RefSeq	XM_940750.1	ILMN_33487	LOC651575	XM_940750.1	XM_940750.1		651575	89066735	XM_940750.1	LOC651575	XP_945843.1	ILMN_1709287	0007040131	S	851	CCCGTCTTGCCACACTCTTTGAGAGTTACAAGTGTAGTATGGAACAAGGG					PREDICTED: Homo sapiens similar to DALR anticodon binding domain containing 3 isoform 1 (LOC651575), mRNA.					
Homo sapiens	Unigene	Hs.566482	ILMN_118800	HS.566482	Hs.566482		Hs.566482		6701050	AW294414			ILMN_1841930	0000840037	S	20	CCAGCCACTCTACTCAAGGGGCATATATTTTGGCATGAGGTGGGATAGAG	6	+	119735772-119735807:119735814-119735827		UI-H-BI2-ahe-g-01-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2726592 3, mRNA sequence					
Homo sapiens	RefSeq	NM_080539.2	ILMN_14798	COLQ	NM_080539.2	NM_080539.2		8292	116805305	NM_080539.2	COLQ	NP_536800.1	ILMN_2329114	0004290288	A	2475	CGTGCATGTCTGTGAGCTGCCTTTCATCACCATTTTTCCTGAGTAGGGCT				3p24.3e	Homo sapiens collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase (COLQ), transcript variant III, mRNA.	A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [pmid 9689136] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9689136] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of acetylcholine that occurs in the synaptic cleft during synaptic transmission [goid 1507] [pmid 9689136] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific asymmetric distribution [goid 8105] [pmid 9689136] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]		EAD	EAD
Homo sapiens	Unigene	Hs.128770	ILMN_76688	HS.128770	Hs.128770		Hs.128770		22832875	BC033844			ILMN_1825421	0001010609	S	1679	ACAGCCCCAGCGGAGGCTTTGGGATCGGTGTGAAAGTCTAGCACTACCAT	1	-	26891456-26891505		Homo sapiens, clone IMAGE:4523945, mRNA					
Homo sapiens	RefSeq	NM_020905.1	ILMN_3300	RDH14	NM_020905.1	NM_020905.1		57665	10190745	NM_020905.1	RDH14	NP_065956.1	ILMN_2222984	0006110739	S	1456	CAATGTTTGGTGTTTGTGTGGAAATTATCTGCCTGGTGTGTGCACACAAG	2	-	18599505-18599554	2p24.2a	Homo sapiens retinol dehydrogenase 14 (all-trans/9-cis/11-cis) (RDH14), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	PAN2	PAN2
Homo sapiens	RefSeq	NM_001017530.1	ILMN_5069	PRR5	NM_001017530.1	NM_001017530.1		55615	66346657	NM_001017530.1	PRR5	NP_001017530.1	ILMN_2409754	0006130630	A	1620	GGTTGGAAATACCATCAGCCTTCCTTGCTCGGCCCAGGTCTGTTTCAGGC	22	+	43511945-43511994	22q13.31b	Homo sapiens proline rich 5 (renal) (PRR5), transcript variant 4, mRNA.				PP610; FLJ20185	PP610; FLJ20185
Homo sapiens	RefSeq	NM_012485.1	ILMN_16900	HMMR	NM_012485.1	NM_012485.1		3161	7108350	NM_012485.1	HMMR	NP_036617.1	ILMN_1781942	0004060064	A	2489	CCCCAGATTCTTCAGCTTGATCCTGGAGGTCTTTTCTAGTCTGAGCTTCT	5	+	162851071-162851120	5q34c	Homo sapiens hyaluronan-mediated motility receptor (RHAMM) (HMMR), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]		Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	RHAMM; MGC119495; IHABP; MGC119494; CD168	RHAMM; MGC119495; IHABP; MGC119494; CD168
Homo sapiens	RefSeq	NM_015668.2	ILMN_21252	RGS22	NM_015668.2	NM_015668.2		26166	63025192	NM_015668.2	RGS22	NP_056483.2	ILMN_1669983	0006760561	S	3780	CCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGT	8	-	101044363-101044382:101046739-101046768	8q22.2b	Homo sapiens regulator of G-protein signalling 22 (RGS22), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MGC102908; DKFZP434I092; PRTD-NY2; FLJ40080	MGC102908; DKFZP434I092; PRTD-NY2; FLJ40080
Homo sapiens	RefSeq	NM_144963.1	ILMN_23552	FAM91A1	NM_144963.2	NM_144963.2		157769	84000431	NM_144963.2	FAM91A1	NP_659400.2	ILMN_1777322	0004920730	S	2519	TCAGAATGGAGTGGACGGTCACCTTCCTCACTTCTTATTGCTAATCTCCA	8	+	124824885-124824934	8q24.13c	Homo sapiens family with sequence similarity 91, member A1 (FAM91A1), mRNA.			Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]	DKFZp666B104; FLJ23790	DKFZp666B104; FLJ23790
Homo sapiens	RefSeq	NM_032593.2	ILMN_20073	HINT2	NM_032593.2	NM_032593.2		84681	49574527	NM_032593.2	HINT2	NP_115982.1	ILMN_1697820	0001570370	S	420	CAAGCAGACAGCAAAGGCTGAGGGCCTGGGAGATGGATACCGACTTGTGA	9	-	35813139-35813142:35813263-35813308	9p13.3a	Homo sapiens histidine triad nucleotide binding protein 2 (HINT2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HIT-17	HIT-17
Homo sapiens	RefSeq	NM_002067.1	ILMN_25749	GNA11	NM_002067.1	NM_002067.1		2767	4504036	NM_002067.1	GNA11	NP_002058.1	ILMN_1802397	0007650246	S	1209	CGCGGCCGTGAAGGACACCATCCTGCAGCTCAACCTCAAGGAGTACAACC	19	+	3072186-3072235	19p13.3f	Homo sapiens guanine nucleotide binding protein (G protein), alpha 11 (Gq class) (GNA11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9175863] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9175863] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8530500] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that modulates the frequency, rate or extent of melanocyte differentiation [goid 45634] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8530500] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	GNA-11	GNA-11
Homo sapiens	RefSeq	NM_004278.2	ILMN_27690	PIGL	NM_004278.3	NM_004278.3		9487	110224469	NM_004278.3	PIGL	NP_004269.1	ILMN_1760332	0006110367	S	910	CTCTGCAAAAGGGAGCCCATGTAGGCCAGGGGCTGTCCAAACTCCAGCTT	17	+	16160736-16160751:16161814-16161847	17p11.2i	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class L (PIGL), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Catalysis of the reaction: N-acetyl-D-glucosaminylphosphatidylinositol + H2O = D-glucosaminylphosphatidylinositol + acetate. The second step enzyme catalyzing the biosynthesis of glycosylphosphatidylinositol (GPI), used to anchor various eukaryotic proteins to the cell-surface membrane. Catalyzes the N-deacetylation of GlcNAc-PI to GlcN-PI [goid 225] [pmid 10085243] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	Unigene	Hs.551145	ILMN_110506	HS.551145	Hs.551145		Hs.551145		19015992	BM702734			ILMN_1886422	0003420465	S	469	TCAACCAAGCTGCTGCTTTCAATGAAGGTCACTTGTTCCTTCAGGGACAC	9	+	44247418-44247467		UI-E-CK1-afh-j-02-0-UI.r1 UI-E-CK1 Homo sapiens cDNA clone UI-E-CK1-afh-j-02-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_198471.2	ILMN_12421	KANK3	NM_198471.2	NM_198471.2		256949	157504498	NM_198471.2	KANK3	NP_940873.2	ILMN_3241744	0000770608	S	2497	TGCGGTGACAATGGAGAGAACCCCCAGGTTCAGTAAGCTGCCTCGTCTGG	19	-	8387708-8387722:8387723-8387757	19p13.2d	Homo sapiens KN motif and ankyrin repeat domains 3 (KANK3), mRNA.				FLJ46061; ANKRD47	FLJ46061
Homo sapiens	RefSeq	NM_001207.3	ILMN_138563	BTF3	NM_001207.3	NM_001207.3		689	29126237	NM_001207.3	BTF3	NP_001198.2	ILMN_1659762	0007330630	S	430	ACCAGCTTGGTGCGGATAGTCTGACTAGTTTAAGGAGACTGGCCGAAGCT	5	+	72834636-72834685	5q13.2c	Homo sapiens basic transcription factor 3 (BTF3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 2320128] [evidence TAS]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 1386332] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18025262] [evidence IPI]	BETA-NAC; BTF3a; BTF3b; NACB	BETA-NAC; BTF3a; BTF3b; NACB
Homo sapiens	RefSeq	NM_181617.1	ILMN_4721	KRTAP21-2	NM_181617.1	NM_181617.1		337978	31791015	NM_181617.1	KRTAP21-2	NP_853648.1	ILMN_1791721	0002070079	S	113	GATATGGCTCTGGCTATGGAACTGGCTGTGGCTATGGCTGTGGATACGGC	21	-	32119358-32119407	21q22.11a	Homo sapiens keratin associated protein 21-2 (KRTAP21-2), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP21.2	KAP21.2
Homo sapiens	RefSeq	NM_001638.2	ILMN_17377	APOF	NM_001638.2	NM_001638.2		319	50659075	NM_001638.2	APOF	NP_001629.1	ILMN_1809311	0000130400	S	1511	TATCCTGGCGGAGTTATGCACGCTTGTAGTCCCAACTACCTGGGAGGCTG	12	-	56754483-56754532	12q13.2c	Homo sapiens apolipoprotein F (APOF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8093033] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [pmid 6816269] [evidence TAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 6816269] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 8093033] [evidence TAS]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [pmid 6816269] [evidence TAS]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [pmid 6816269] [evidence TAS]	DKFZp781G18150; Apo-F; MGC22520	DKFZp781G18150; Apo-F; MGC22520
Homo sapiens	RefSeq	NM_000795.2	ILMN_7625	DRD2	NM_016574.2	NM_016574.2		1813	17986269	NM_016574.2	DRD2	NP_057658.2	ILMN_1675057	0005810187	A	2222	CTCTATCTGGGCCTGGGCTAGGGGACATCAGAGGTTCTTTGAGGGACTGC	11	-	112785747-112785796	11q23.1d-q23.2a	Homo sapiens dopamine receptor D2 (DRD2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2531656] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence ISS]	A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence ISS]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [evidence ISS]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence ISS]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence ISS]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence ISS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 7921596] [evidence IC ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 2531656] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [pmid 2531656] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [pmid 1331329] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [pmid 2531656] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 1331329] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence ISS]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence ISS]; The biosynthesis of a synapse [goid 7416] [evidence ISS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence ISS]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence ISS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISS]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence ISS]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence ISS]; The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex [goid 21853] [evidence ISS]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence ISS]; The process of renal water excretion [goid 30146] [evidence ISS]; The process of renal sodium excretion [goid 30147] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence ISS]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [evidence ISS]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence ISS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30814] [pmid 8666994] [evidence IDA]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence ISS]; Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours [goid 32922] [evidence ISS]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [pmid 8301582] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence ISS]; Any process that modulates the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43266] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence ISS]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence ISS]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence ISS]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence ISS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence ISS]; The process by which the anatomical structures of branches in a nerve are generated and organized. Morphogenesis pertains to the creation of form. This term refers to an anatomical structure (nerve) not a cell (neuron) [goid 48755] [evidence ISS]; The regulated release of arachidonic acid from a cell or group of cells [goid 50482] [pmid 8301582] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50709] [pmid 16839358] [evidence IDA]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence ISS]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [pmid 1331329] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the directed movement of dopamine into a cell [goid 51586] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51927] [pmid 7921596] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence ISS]; Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60124] [evidence ISS]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence ISS]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [pmid 17194762] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 60160] [evidence ISS]	Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gi/Go to initiate a change in cell activity [goid 1591] [pmid 2531656] [evidence IDA]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D2 receptors [goid 1670] [pmid 8301582] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]	D2R; D2DR	D2DR; D2R
Homo sapiens	RefSeq	NM_016574.2	ILMN_7625	DRD2	NM_016574.2	NM_016574.2		1813	17986269	NM_016574.2	DRD2	NP_057658.2	ILMN_2401494	0003360605	A	1875	CCGAGGAGCCAGGCAACTTCAGTCCTGGGAGACCCATGTAAATACCAGAC	11	-	112786094-112786143	11q23.1d-q23.2a	Homo sapiens dopamine receptor D2 (DRD2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2531656] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence ISS]	A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence ISS]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [evidence ISS]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence ISS]; Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [evidence ISS]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence ISS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 7921596] [evidence IC ]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 2531656] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [pmid 2531656] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [pmid 1331329] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [pmid 2531656] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 1331329] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence ISS]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence ISS]; The biosynthesis of a synapse [goid 7416] [evidence ISS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence ISS]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence ISS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISS]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence ISS]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [evidence ISS]; The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex [goid 21853] [evidence ISS]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence ISS]; The process of renal water excretion [goid 30146] [evidence ISS]; The process of renal sodium excretion [goid 30147] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence ISS]; The chemical reactions and pathways involving phosphoinositides, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of inositol. They are important constituents of cell membranes [goid 30384] [evidence ISS]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence ISS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30814] [pmid 8666994] [evidence IDA]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence ISS]; Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours [goid 32922] [evidence ISS]; The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [pmid 8301582] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence ISS]; Any process that modulates the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43266] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure [goid 43278] [evidence ISS]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [evidence ISS]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence ISS]; A change in the behavior of an organism as a result of an ethanol stimulus [goid 48149] [evidence ISS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence ISS]; The process by which the anatomical structures of branches in a nerve are generated and organized. Morphogenesis pertains to the creation of form. This term refers to an anatomical structure (nerve) not a cell (neuron) [goid 48755] [evidence ISS]; The regulated release of arachidonic acid from a cell or group of cells [goid 50482] [pmid 8301582] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50709] [pmid 16839358] [evidence IDA]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence ISS]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [pmid 1331329] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the directed movement of dopamine into a cell [goid 51586] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51927] [pmid 7921596] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51967] [evidence ISS]; Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60124] [evidence ISS]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence ISS]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [pmid 17194762] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 60160] [evidence ISS]	Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gi/Go to initiate a change in cell activity [goid 1591] [pmid 2531656] [evidence IDA]; A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D2 receptors [goid 1670] [pmid 8301582] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]	D2R; D2DR	D2DR; D2R
Homo sapiens	RefSeq	NM_024027.3	ILMN_6548	COLEC11	NM_024027.3	NM_024027.3		78989	40548418	NM_024027.3	COLEC11	NP_076932.1	ILMN_1735192	0007050372	A	1051	GAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGT	2	+	3669320-3669369	2p25.3b	Homo sapiens collectin sub-family member 11 (COLEC11), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]	CL-K1-II; CL-K1-IIb; DKFZp686N1868; CL-K1-IIa; CL-K1-I; MGC3279	CL-K1-II; CL-K1-IIb; DKFZp686N1868; CL-K1-IIa; CL-K1-I; MGC3279
Homo sapiens	RefSeq	XM_001713888.1	ILMN_350003	LOC100130988	XM_001713888.1	XM_001713888.1		100130988	169169974	XM_001713888.1	LOC100130988	XP_001713940.1	ILMN_3293007	0000870482	M	61	AACCCTGCTTTTCTTAAATTTCACCCTTATCCCCCTTCAGTTTTGCCAGA	7	+	50106408-50106457	7p12.2a	PREDICTED: Homo sapiens hypothetical protein LOC100130988 (LOC100130988), mRNA.					
Homo sapiens	RefSeq	XM_001713888.1	ILMN_350003	LOC100130988	XM_001713888.1	XM_001713888.1		100130988	169169974	XM_001713888.1	LOC100130988	XP_001713940.1	ILMN_3216496	0003930471	A	557	CAAACAAGAAATGTAATGCAAAGGACTCATTTTACAAGTCCTCTACACAA	7	+	50139884-50139933	7p12.2a	PREDICTED: Homo sapiens hypothetical protein LOC100130988 (LOC100130988), mRNA.					
Homo sapiens	RefSeq	NM_198287.1	ILMN_18058	ING4	NM_016162.2	NM_016162.2		51147	38201669	NM_016162.2	ING4	NP_057246.2	ILMN_1809141	0001430767	A	1299	GGATTCATCCTGGGAGAGGGGGCAAGGTGGAATGCAGATAACTCACATGT	12	-	6630057-6630106	12p13.31d	Homo sapiens inhibitor of growth family, member 4 (ING4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15029197] [evidence IDA]	The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6473] [pmid 12750254] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 15251430] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 15251430] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 15251430] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 12750254] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 15029197] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [pmid 12750254] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15029197] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12750254] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	my036; p29ING4; MGC12557	my036; p29ING4; MGC12557
Homo sapiens	RefSeq	NM_001005163.1	ILMN_20540	OR52D1	NM_001005163.1	NM_001005163.1		390066	52353331	NM_001005163.1	OR52D1	NP_001005163.1	ILMN_1815548	0001240189	S	759	TTTCTACATCCCTGCCTTCTTCTCCTTCCTCACCCACCGCTTTGGTCACC	11	+	5467271-5467320	11p15.4c	Homo sapiens olfactory receptor, family 52, subfamily D, member 1 (OR52D1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11121057] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 11121057] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 11121057] [evidence NAS]	OR11-43	OR11-43
Homo sapiens	RefSeq	NM_147193.1	ILMN_19009	GLIS1	NM_147193.1	NM_147193.1		148979	22218342	NM_147193.1	GLIS1	NP_671726.1	ILMN_1736101	0000050767	S	2395	TGGGCCACATCCCCTCCATCTACACAGACACCTGAAGGAGCCCCCACATG	1	-	53744865-53744879:53744880-53744914	1p32.3c	Homo sapiens GLIS family zinc finger 1 (GLIS1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ36155	FLJ36155
Homo sapiens	Unigene	Hs.582893	ILMN_135074	HS.582893	Hs.582893		Hs.582893		83149951	DB338252			ILMN_1839994	0001450546	S	450	TGTGTAGGTGGAGGGAGGCAAAGTTGTGGTAATAAAGTGGGAAGGCCCGG	6	+	17064262-17064311		DB338252 TESTI2 Homo sapiens cDNA clone TESTI2035277 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001900.4	ILMN_10970	CST5	NM_001900.4	NM_001900.4		1473	62241009	NM_001900.4	CST5	NP_001891.2	ILMN_1688022	0007570382	S	465	CCATTCTGAACTACAAGTGCCGGAAAGTCTAGGGGTCTGTGCAAGGCCTG	20	-	23856797-23856824:23856825-23856846	20p11.21b	Homo sapiens cystatin D (CST5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [pmid 1939105] [evidence TAS]	MGC71922	MGC71922
Homo sapiens	RefSeq	XR_019267.1	ILMN_170330	LOC645453	XR_019267.1	XR_019267.1		645453	113425616	XR_019267.1	LOC645453		ILMN_3200335	0004850441	A	2440	TTCTCACGCCATACAGAGAGGGGTGAAGGAAATTACCAGTTTAGACTAAG				15q21.2a	PREDICTED: Homo sapiens misc_RNA (LOC645453), miscRNA.					
Homo sapiens	RefSeq	XM_933437.1	ILMN_39828	LOC646135	XM_933437.1	XM_933437.1		646135	88943932	XM_933437.1	LOC646135	XP_938530.1	ILMN_1692916	0002340091	S	65	CGAGACCAAGAGCAGTGATTATGAATGGCAAGTGGCAAGAAACGGGGTGG	1	-	242305244-242305290:242321514-242321516		PREDICTED: Homo sapiens hypothetical protein LOC646135 (LOC646135), mRNA.					
Homo sapiens	RefSeq	NM_001001682.1	ILMN_29616	C16ORF85	NM_001001682.1	NM_001001682.1		400555	48717369	NM_001001682.1	C16orf85	NP_001001682.1	ILMN_1806657	0007400471	S	2819	GTGTGGCAGACCTCACTGAAGATCCCCCTACCCCAGGCTCAAGTCAGAGA	16	-	87147930-87147971:87160468-87160475	16q24.2b	Homo sapiens chromosome 16 open reading frame 85 (C16orf85), mRNA.				FLJ45530	FLJ45530
Homo sapiens	RefSeq	NM_000318.1	ILMN_30287	PXMP3	NM_000318.2	NM_000318.2		5828	121114288	NM_000318.2	PXMP3	NP_000309.1	ILMN_1743299	0001090288	S	1185	GAATGCGCTCTATGTGGAGAGTGGCCCACCATGCCTCACACCATAGGATG	8	-	78058193-78058242	8q21.11d	Homo sapiens peroxisomal membrane protein 3, 35kDa (PXMP3), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 12751901] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [pmid 1546315] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10837480] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PAF1; PMP35; PEX2; PAF-1; RNF72; PMP3	PAF-1; RNF72; PAF1; PMP35; PEX2
Homo sapiens	RefSeq	Hs.126371	ILMN_30287	PXMP3	NM_000318.2	NM_000318.2		5828	121114288	NM_000318.2	PXMP3	NP_000309.1	ILMN_1869432	0005570370	S	4148	GTCCTGGAGGAGGCCGTTCACCACAGGAAACTGAGGTGTTCTTAGAAGGG	8	-	78055230-78055279	8q21.11d	Homo sapiens peroxisomal membrane protein 3, 35kDa (PXMP3), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 12751901] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [pmid 1546315] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10837480] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PAF1; PMP35; PEX2; PAF-1; RNF72; PMP3	
Homo sapiens	RefSeq	NM_207502.1	ILMN_19360	C6ORF122	NM_207502.1	NM_207502.1		401288	46409625	NM_207502.1	C6orf122	NP_997385.1	ILMN_1717295	0006860326	S	2078	CGGGACCTTGACAACACCTGGCCCCACCCACACGTCCTGCAATATTCACT	6	-	169931101-169931150	6q27f	Homo sapiens chromosome 6 open reading frame 122 (C6orf122), mRNA.				dJ266L20.5; FLJ31451	dJ266L20.5; FLJ31451
Homo sapiens	RefSeq	NM_152890.4	ILMN_14134	COL24A1	NM_152890.4	NM_152890.4		255631	32964828	NM_152890.4	COL24A1	NP_690850.1	ILMN_1810996	0006840639	S	5650	GCCGGTGATACACTACCTCTTACGTGTTGCCTCTTTGTGTTGCTTGGTGC	1	-	85968304-85968353	1p22.3d	Homo sapiens collagen, type XXIV, alpha 1 (COL24A1), mRNA.	Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]		
Homo sapiens	RefSeq	NM_173540.1	ILMN_25595	FUT11	NM_173540.2	NM_173540.2		170384	145580616	NM_173540.2	FUT11	NP_775811.2	ILMN_1678862	0000070553	S	1700	GGGCCTCTCCTCAAGGAGAGATGGAGGGATACAATTCTTGGTTCAGTGGG	10	+	75205627-75205676	10q22.2a	Homo sapiens fucosyltransferase 11 (alpha (1,3) fucosyltransferase) (FUT11), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8417] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC33202; MGC119339; MGC119338	MGC33202; MGC119339; MGC119338
Homo sapiens	RefSeq	NM_201626.1	ILMN_176756	USP33	NM_015017.3	NM_015017.3		23032	42516566	NM_015017.3	USP33	NP_055832.3	ILMN_1723536	0000650672	A	2577	CGACAGTGGCTTAATAAATTTAAGACCTTTGCCGAACCTGGCCCTATTTC	1	-	78180327-78180376	1p31.1e	Homo sapiens ubiquitin specific peptidase 33 (USP33), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11739384] [evidence TAS]; A protein complex that possesses ubiquitin ligase activity; the complex is usually pentameric; for example, in mammals the subunits are pVHL, elongin B, elongin C, cullin-2 (Cul2), and Rbx1 [goid 30891] [pmid 11739384] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 11739384] [evidence TAS]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [pmid 11739384] [evidence IDA]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence ISS]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11739384] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC16868; KIAA1097; VDU1	MGC16868; KIAA1097; VDU1
Homo sapiens	RefSeq	XM_001715926.1	ILMN_350804	LOC646057	XM_001715926.1	XM_001715926.1		646057	169208530	XM_001715926.1	LOC646057	XP_001715978.1	ILMN_3217450	0000520402	A	132	GCCCATCGACTGCCATAAGGATGAAGATGCTGCAGTGCGTCTGTGGCCCA				15q11.2a	PREDICTED: Homo sapiens similar to hCG2003024 (LOC646057), mRNA.					
Homo sapiens	RefSeq	NM_014320.2	ILMN_21130	HEBP2	NM_014320.2	NM_014320.2		23593	41393567	NM_014320.2	HEBP2	NP_055135.1	ILMN_1755077	0003940026	S	804	CGATGAGAAGGTTTACTACACTGCAGGCTACAACAGTCCTGTCAAATTGC	6	+	138734104-138734153	6q23.3d	Homo sapiens heme binding protein 2 (HEBP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			RP3-422G23.1; KIAA1244; C6ORF34B; PP23; SOUL; C6orf34	RP3-422G23.1; KIAA1244; C6ORF34B; PP23; SOUL; C6orf34
Homo sapiens	RefSeq	NM_020751.1	ILMN_20269	COG6	NM_020751.1	NM_020751.1		57511	33457343	NM_020751.1	COG6	NP_065802.1	ILMN_1779530	0005420376	S	2925	ACTGCCAGAGGAGGAGTTGCCAATTGGCAGTGTGTCTTATCTCCATGTTG	13	+	39224131-39224180	13q13.3e	Homo sapiens component of oligomeric golgi complex 6 (COG6), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p) [goid 17119] [pmid 15047703] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		COD2; KIAA1134; DKFZp313D191	COD2; KIAA1134; DKFZp313D191
Homo sapiens	RefSeq	XR_039516.1	ILMN_345650	LOC400061	XR_039516.1	XR_039516.1		400061	169204886	XR_039516.1	LOC400061		ILMN_3287986	0003440390	M	655	GCCACCTTTTGCCTACGAATACTTGGTGTAAAGAAGAGCCCCTTGTCCCC				12q22c	PREDICTED: Homo sapiens misc_RNA (LOC400061), miscRNA.					
Homo sapiens	RefSeq	XR_039516.1	ILMN_345650	LOC400061	XR_039516.1	XR_039516.1		400061	169204886	XR_039516.1	LOC400061		ILMN_3211488	0003990048	A	415	CGAAAAGAGAAAGTGGGAAAATGGGAAGTCCCTCTGCCTAAAGTACGTGC				12q22c	PREDICTED: Homo sapiens misc_RNA (LOC400061), miscRNA.					
Homo sapiens	RefSeq	NM_001009913.1	ILMN_19977	DKFZP686O24166	NM_001009913.1	NM_001009913.1		374383	57863760	NM_001009913.1	DKFZp686O24166	NP_001009913.1	ILMN_1669972	0005670187	S	6060	CAACACATAGGCCTTCCCAGACATGCACCCTCATGGGATTCCAGACCCCC	11	+	17355122-17355171	11p15.1d	Homo sapiens hypothetical protein DKFZp686O24166 (DKFZp686O24166), mRNA.				DKFZp686I21167	DKFZp686I21167
Homo sapiens	RefSeq	NM_031917.2	ILMN_23873	ANGPTL6	NM_031917.2	NM_031917.2		83854	29893554	NM_031917.2	ANGPTL6	NP_114123.2	ILMN_1725518	0005050707	S	1360	TGGCACAATGACAAGCCCTTCAGCACCGTGGATAGGGACCGAGACTCCTA	19	-	10204029-10204078	19p13.2c	Homo sapiens angiopoietin-like 6 (ANGPTL6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	AGF; ARP5	AGF; ARP5
Homo sapiens	RefSeq	XM_936708.1	ILMN_36662	LOC391817	XM_936708.1	XM_936708.1		391817	88988802	XM_936708.1	LOC391817	XP_941801.1	ILMN_1715747	0005900128	A	16	CCTGGCCCCACTTACCATGAACAAGAAAGTCCTCATCCCTGCAACAAAGA					PREDICTED: Homo sapiens similar to peptidase (prosome, macropain) 26S subunit, ATPase 1 (LOC391817), mRNA.					
Homo sapiens	RefSeq	NR_002568.1	ILMN_28653	NAG18	NR_002568.1	NR_002568.1		57051	76677901	NR_002568.1	NAG18		ILMN_2090949	0002230037	S	1490	AGGCTGCGGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGCAAAAA	7	+	63143397-63143446	19q13.43c	Homo sapiens NAG18 protein (NAG18) on chromosome 19.					
Homo sapiens	RefSeq	NR_002568.1	ILMN_28653	NAG18	NR_002568.1	NR_002568.1		57051	76677901	NR_002568.1	NAG18		ILMN_1775627	0001230475	S	1147	ACCAGAATGAAATCCTATCACCTGAGGCAACATGGATGGAAATGGAGGAC	7	+	63143054-63143103	19q13.43c	Homo sapiens NAG18 protein (NAG18) on chromosome 19.					
Homo sapiens	RefSeq	XM_938388.1	ILMN_33482	LOC649320	XM_938388.1	XM_938388.1		649320	89059209	XM_938388.1	LOC649320	XP_943481.1	ILMN_1707578	0003800450	S	1	ATGGCTGCACGCTCTGTAGATGACATCTCAATCAAGCTGCTTCATGAGAA					PREDICTED: Homo sapiens hypothetical protein LOC649320 (LOC649320), mRNA.					
Homo sapiens	RefSeq	NM_178433.1	ILMN_176349	LCE3B	NM_178433.1	NM_178433.1		353143	30410040	NM_178433.1	LCE3B	NP_848520.1	ILMN_1787260	0002190653	S	100	TCCTCCTGCTGTGCTCCAAGACCTGGGTGCTGTGGTGGCCCCAGCTCTGA	1	+	150853010-150853059	1q21.3b	Homo sapiens late cornified envelope 3B (LCE3B), mRNA.		The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]	LEP14	LEP14
Homo sapiens	RefSeq	NM_000197.1	ILMN_810	HSD17B3	NM_000197.1	NM_000197.1		3293	4557648	NM_000197.1	HSD17B3	NP_000188.1	ILMN_1765954	0003890768	S	956	TGAAGCTCAACACCAAGGTCAGGTAGCCAGGCGGTGAGGAGTCCAGCACA	9	-	98997717-98997741:98997742-98997766	9q22.32b	Homo sapiens hydroxysteroid (17-beta) dehydrogenase 3 (HSD17B3), mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 8075637] [evidence TAS]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [pmid 15583024] [evidence EXP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [pmid 8075637] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADP+ + testosterone = NADPH + H+ + androst-4-ene-3,17-dione [goid 47045] [evidence IEA]	EDH17B3	EDH17B3
Homo sapiens	RefSeq	NM_198830.1	ILMN_165898	ACLY	NM_001096.2	NM_001096.2		47	38569420	NM_001096.2	ACLY	NP_001087.2	ILMN_1749014	0004290279	A	3754	CTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTCT	17	-	40023728-40023777	17q21.2b	Homo sapiens ATP citrate lyase (ACLY), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1371749] [evidence EXP]; Citrate lyase is a multienzyme complex with three constituents: the alpha subunit, citrate-ACP transferase; the beta subunit, citryl-ACP lyase; and the gamma subunit, an acyl-carrier protein which also carries the prosthetic group components. All three subunits are required for citrate lyase enzyme activity [goid 9346] [pmid 1371749] [evidence TAS]	The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle [goid 6101] [pmid 1371749] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [pmid 1371749] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15936] [pmid 1371749] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ADP + phosphate + acetyl-CoA + oxaloacetate = ATP + citrate + CoA [goid 3878] [pmid 1371749] [evidence TAS]; Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: citrate = acetate + oxaloacetate [goid 8815] [pmid 1371749] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CLATP; ATPCL; ACL	CLATP; ATPCL; ACL
Homo sapiens	RefSeq	NM_182762.2	ILMN_183371	7A5	NM_182762.2	NM_182762.2		346389	47271497	NM_182762.2	7A5	NP_877439.2	ILMN_1762337	0006450255	S	2725	GTGTTACAAGACCTTCAGTCAGCTTTGGACAGAATGAAAAACCCTGTGAC	7	-	20147187-20147236	7p15.3e	Homo sapiens putative binding protein 7a5 (7A5), mRNA.					
Homo sapiens	RefSeq	NM_003418.1	ILMN_9092	CNBP	NM_003418.1	NM_003418.1		7555	4827070	NM_003418.1	CNBP	NP_003409.1	ILMN_2169839	0007380068	S	1074	CAAGTAACATCTGTATCAGGCCCTACATAGAACATACAGTTGAGTGGGAG	3	-	130371494-130371543	3q21.3c	Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 2562787] [evidence TAS]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [pmid 2562787] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2562787] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZCCHC22; CNBP1; RNF163; PROMM; ZNF9; DM2	ZCCHC22; CNBP1; RNF163; PROMM; ZNF9; DM2
Homo sapiens	RefSeq	NM_003418.1	ILMN_9092	CNBP	NM_003418.1	NM_003418.1		7555	4827070	NM_003418.1	CNBP	NP_003409.1	ILMN_1769319	0005900600	S	583	TGTGGCGAGTCAGGGCACCTTGCACGGGAATGCACAATTGAGGCTACAGC	3	-	130371985-130371985:130371986-130372034	3q21.3c	Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 2562787] [evidence TAS]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [pmid 2562787] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2562787] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZCCHC22; CNBP1; RNF163; PROMM; ZNF9; DM2	ZCCHC22; CNBP1; RNF163; PROMM; ZNF9; DM2
Homo sapiens	RefSeq	NM_013286.3	ILMN_1587	RBM15B	NM_013286.3	NM_013286.3		29890	54607123	NM_013286.3	RBM15B	NP_037418.3	ILMN_1673024	0005550026	S	6141	CTGCCCCAGCTACAGAGACGGCCGAAATGCTTTCACTCCTTAGCTTTGCC	3	+	51409911-51409960	3p21.2c	Homo sapiens RNA binding motif protein 15B (RBM15B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	OTT3; HUMAGCGB	OTT3; HUMAGCGB
Homo sapiens	RefSeq	NM_032679.1	ILMN_5838	ZNF577	NM_032679.1	NM_032679.1		84765	14249251	NM_032679.1	ZNF577	NP_116068.1	ILMN_1667322	0003940768	S	2550	GCTGCCCAAATTCTGTGGTTTGGGGCCTCCTTTCAAAACCAGCAATGGCC	19	-	57066814-57066863	19q13.33e	Homo sapiens zinc finger protein 577 (ZNF577), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC4400	MGC4400
Homo sapiens	RefSeq	NM_032679.1	ILMN_5838	ZNF577	NM_032679.1	NM_032679.1		84765	14249251	NM_032679.1	ZNF577	NP_116068.1	ILMN_2212823	0006660487	S	2918	TAAATTAACCTACCTGGCCAGGCACAGTGGCTCACACCTGTAATCTCAGC	19	-	57066446-57066495	19q13.33e	Homo sapiens zinc finger protein 577 (ZNF577), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC4400	MGC4400
Homo sapiens	RefSeq	NM_170672.1	ILMN_18769	RASGRP3	NM_170672.1	NM_170672.1		25780	24762238	NM_170672.1	RASGRP3	NP_733772.1	ILMN_1727045	0002450400	S	4333	GAACGTGCCATCTGTAAAGCACTCAGAAGGCAGCCATCCCTAGATGTTGG	2	+	33642941-33642990	2p22.3d	Homo sapiens RAS guanyl releasing protein 3 (calcium and DAG-regulated) (RASGRP3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10934204] [evidence NAS]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 10934204] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10934204] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10934204] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10934204] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any member of the Ras superfamily of monomeric GTPases [goid 17016] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [pmid 10934204] [evidence NAS]; Increases the rate of GTP hydrolysis by a GTPase of the Rap family [goid 46582] [pmid 10934204] [evidence IDA]	GRP3; KIAA0846	GRP3; KIAA0846
Homo sapiens	RefSeq	XM_001713906.1	ILMN_346905	LOC643123	XM_001713906.1	XM_001713906.1		643123	169216145	XM_001713906.1	LOC643123	XP_001713958.1	ILMN_3212921	0004120601	A	167	AGTGACTGATCAGGCTTTTGTCACACTGGCCACAGATGACATCTACTGCC				Yq11.21a	PREDICTED: Homo sapiens similar to hCG1988622 (LOC643123), mRNA.					
Homo sapiens	RefSeq	NM_001008237.1	ILMN_4829	TTC32	NM_001008237.1	NM_001008237.1		130502	56606132	NM_001008237.1	TTC32	NP_001008238.1	ILMN_2083593	0005420300	S	278	GGAGCAAATGCAGCCCTGAGGATTTGGCTACTGCATATAACAACAGGGGG	2	-	20097750-20097796:20101467-20101469	2p24.1d	Homo sapiens tetratricopeptide repeat domain 32 (TTC32), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_001008237.1	ILMN_4829	TTC32	NM_001008237.1	NM_001008237.1		130502	56606132	NM_001008237.1	TTC32	NP_001008238.1	ILMN_2083588	0005670114	S	360	AGCCATGGATGACTACACATCTGCCATAGAAGTCCAACCCAATTTTGAAG	2	-	20097668-20097717	2p24.1d	Homo sapiens tetratricopeptide repeat domain 32 (TTC32), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_000964.2	ILMN_12571	RARA	NM_000964.2	NM_000964.2		5914	75812906	NM_000964.2	RARA	NP_000955.1	ILMN_1677197	0004050706	I	4	AAGCAGGGGGGAATCCTGAATCGAGCTGAGAGGGCTTCCCCGGTTCTCCT	17	+	35718975-35719024	17q21.2a	Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 2825025] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2825025] [evidence IDA]; Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [pmid 15831516] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [pmid 15831516] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 17538076] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [pmid 18416830] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-13 production [goid 32736] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-4 production [goid 32753] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-5 production [goid 32754] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation [goid 45630] [pmid 18416830] [evidence IDA]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [pmid 17538076] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid [goid 1972] [pmid 2825025] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2825025] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10866662] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16432238] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17560333] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR1B1; RAR	NR1B1; RAR
Homo sapiens	RefSeq	NM_001024809.2	ILMN_12571	RARA	NM_000964.2	NM_000964.2		5914	75812906	NM_000964.2	RARA	NP_000955.1	ILMN_1659206	0007050600	A	3180	CCTGGAGCCCGTGGGTGCACCTGTTACTGTTGGGCTTTCCACTGAGATCT	17	+	35767340-35767389	17q21.2a	Homo sapiens retinoic acid receptor, alpha (RARA), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 2825025] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2825025] [evidence IDA]; Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [pmid 15831516] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [pmid 15831516] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 17538076] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [pmid 18416830] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-13 production [goid 32736] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-4 production [goid 32753] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-5 production [goid 32754] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation [goid 45630] [pmid 18416830] [evidence IDA]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [pmid 17538076] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid [goid 1972] [pmid 2825025] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2825025] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10866662] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16432238] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17560333] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR1B1; RAR	NR1B1; RAR
Homo sapiens	RefSeq	NM_080552.2	ILMN_23046	SLC32A1	NM_080552.2	NM_080552.2		140679	40806213	NM_080552.2	SLC32A1	NP_542119.1	ILMN_1697512	0000840215	S	2231	CAGAGCTCGGAATCTACAGCGTCCAGCCATTTCCAGCAAGAGCGCTTCCC	20	+	36791086-36791135	20q11.23c	Homo sapiens solute carrier family 32 (GABA vesicular transporter), member 1 (SLC32A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of glycine, aminoethanoic acid, into, out of, within or between cells [goid 15816] [evidence IEA]	Catalysis of the transfer of glycine from one side of a membrane to the other. Glycine is aminoethanoic acid [goid 15187] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + H+(out) = gamma-aminobutyric acid(in) + H+(in) [goid 15495] [evidence IEA]	VIAAT; VGAT	VIAAT; VGAT
Homo sapiens	Unigene	Hs.308202	ILMN_85712	HS.308202	Hs.308202		Hs.308202		34192103	BC030121			ILMN_1889624	0001990240	S	829	GCACCAGAAAATCTCCTCTTTAGGTGCCCACTTCTGAGCTTTAGTCCTCC	5	-	7400087-7400136		Homo sapiens cDNA clone IMAGE:4814133					
Homo sapiens	RefSeq	NM_005884.3	ILMN_19029	PAK4	NM_005884.3	NM_005884.3		10298	62422555	NM_005884.3	PAK4	NP_005875.1	ILMN_2354673	0000460100	A	2182	TCGTGACTTTTAGAAAAACACAGGGACTCGTGGGAGCAAGCGAGGCTCCC	19	+	39669390-39669439	19q13.2a	Homo sapiens p21 protein (Cdc42/Rac)-activated kinase 4 (PAK4), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9822598] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9822598] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9822598] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_005439.1	ILMN_25562	MLF2	NM_005439.1	NM_005439.1		8079	4885486	NM_005439.1	MLF2	NP_005430.1	ILMN_1671885	0006400474	S	1189	CCACTCCATCTTCAAACCCCCTCACCTTTCCCATCCTACTCCTGCCATGC	12	-	6727701-6727750	12p13.31d	Homo sapiens myeloid leukemia factor 2 (MLF2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 8661158] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	NTN4	NTN4
Homo sapiens	RefSeq	NM_020918.2	ILMN_174762	GPAM	NM_020918.3	NM_020918.3		57678	142387138	NM_020918.3	GPAM	NP_065969.2	ILMN_1758213	0007040372	S	5811	GATCGGAGCTCTTTCCTTTGATAGAGAGAACAGCCCCAATGATCCTGGCT	10	-	113900119-113900168	10q25.2b	Homo sapiens glycerol-3-phosphate acyltransferase, mitochondrial (GPAM), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11546763] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the reaction: acyl-CoA + sn-glycerol 3-phosphate = CoA + 1-acyl-sn-glycerol 3-phosphate [goid 4366] [evidence IEA]; Catalysis of the reaction: acyl-CoA + sn-glycerol 3-phosphate = CoA + 1-acyl-sn-glycerol 3-phosphate [goid 4366] [pmid 11546763] [evidence EXP]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GPAT1; MGC26846; KIAA1560; RP11-426E5.2	MGC26846; KIAA1560; RP11-426E5.2
Homo sapiens	RefSeq	NM_001418.3	ILMN_19314	EIF4G2	NM_001418.3	NM_001418.3		1982	111494227	NM_001418.3	EIF4G2	NP_001409.1	ILMN_2279635	0004290446	I	1753	CTCTTATCCCAGCTGCAAGGACAGTCGAAGGATATGCCACCTCGGTTTTC	11	-	10823235-10823284	11p15.3e	Homo sapiens eukaryotic translation initiation factor 4 gamma, 2 (EIF4G2), transcript variant 1, mRNA.	The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome [goid 16281] [pmid 11943866] [evidence IDA]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 11943866] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9032289] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 9032289] [evidence TAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 11943866] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16166382] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	AAG1; NAT1; p97; FLJ41344; DAP5	AAG1; NAT1; p97; DAP5
Homo sapiens	RefSeq	NM_001418.1	ILMN_19314	EIF4G2	NM_001418.3	NM_001418.3		1982	111494227	NM_001418.3	EIF4G2	NP_001409.1	ILMN_1761519	0006220044	S	3406	GCAGAGGCAGTCTATTGCAAGGACCTTCTTTGCTGCCAGTTATCATAGGC	11	-	10819048-10819097	11p15.3e	Homo sapiens eukaryotic translation initiation factor 4 gamma, 2 (EIF4G2), transcript variant 1, mRNA.	The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome [goid 16281] [pmid 11943866] [evidence IDA]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 11943866] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9032289] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 9032289] [evidence TAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 11943866] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16166382] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	AAG1; NAT1; p97; FLJ41344; DAP5	AAG1; NAT1; p97; DAP5
Homo sapiens	RefSeq	NM_001418.3	ILMN_19314	EIF4G2	NM_001418.3	NM_001418.3		1982	111494227	NM_001418.3	EIF4G2	NP_001409.1	ILMN_2380946	0002260095	A	3632	ATGGGCTTTATGTGCTAGATTTTAATATCCTTGAGCCTGGGCAAGTGCAC	11	-	10818822-10818871	11p15.3e	Homo sapiens eukaryotic translation initiation factor 4 gamma, 2 (EIF4G2), transcript variant 1, mRNA.	The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome [goid 16281] [pmid 11943866] [evidence IDA]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 11943866] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9032289] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 9032289] [evidence TAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 11943866] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16166382] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	AAG1; NAT1; p97; FLJ41344; DAP5	AAG1; NAT1; p97; DAP5
Homo sapiens	RefSeq	NM_152728.1	ILMN_1817	C18ORF20	NM_152728.1	NM_152728.1		221241	22749444	NM_152728.1	C18orf20	NP_689941.1	ILMN_1771012	0006620328	S	630	GGGAGAGATCAGAGGTCATACTGTGAAGCACCTTTGGATAAACGGCAGGG	18	-	59898416-59898465	18q22.1a	Homo sapiens chromosome 18 open reading frame 20 (C18orf20), mRNA.				HsT1235; MGC39571	HsT1235; MGC39571
Homo sapiens	RefSeq	XM_936462.1	ILMN_32365	ZNF699	XM_936462.1	XM_936462.1		374879	89057124	XM_936462.1	ZNF699	XP_941555.1	ILMN_1812805	0002070528	A	3215	TAGTGGGGCCATCAGACAGAGAGACAGATGTATAAAGGCCTGGTGACCTC				19p13.2c	PREDICTED: Homo sapiens zinc finger protein 699 (ZNF699), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_005786.3	ILMN_39002	TSHZ1	NM_005786.4	NM_005786.4		10194	90193630	NM_005786.4	TSHZ1	NP_005777.3	ILMN_1718907	0001780300	S	4318	CCCCACTCGCCACTATGCCCAAACCCTCTGGATGCTGAAAAATGCCACTT	18	+	71130240-71130289	18q22.3d	Homo sapiens teashirt zinc finger homeobox 1 (TSHZ1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TSH1; SDCCAG33; NY-CO-33	TSH1; NY-CO-33
Homo sapiens	RefSeq	NM_025265.2	ILMN_2707	TSEN2	NM_025265.2	NM_025265.2		80746	21314730	NM_025265.2	TSEN2	NP_079541.1	ILMN_1746393	0006900176	S	2154	GCACTTTCATACGCAGGCATCTCTTGTTACCTACATCTAAGCTGTTCCCG	3	+	12549607-12549656	3p25.1d	Homo sapiens tRNA splicing endonuclease 2 homolog (S. cerevisiae) (TSEN2), mRNA.	A complex that catalyzes the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron [goid 214] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Splicing of tRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons [goid 6388] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the endonucleolytic cleavage of pre-tRNA, producing 5'-hydroxyl and 2',3'-cyclic phosphate termini, and specifically removing the intron [goid 213] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC4440; MGC2776; SEN2; SEN2L	MGC4440; MGC2776; SEN2; SEN2L
Homo sapiens	RefSeq	NM_207325.1	ILMN_17111	DPY19L3	NM_207325.1	NM_207325.1		147991	46409291	NM_207325.1	DPY19L3	NP_997208.1	ILMN_1725072	0005220477	S	4006	CAGCATGGGTCAGTACATCCTTCGGCGAGTGCCTTACTCTAATTGAAACC	19	+	32974786-32974835	19q13.11a	Homo sapiens dpy-19-like 3 (C. elegans) (DPY19L3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp686J17135; MGC35440	DKFZp686J17135; MGC35440
Homo sapiens	RefSeq	XM_932827.1	ILMN_174130	LOC729732	XM_001131147.1	XM_001131147.1		729732	113420014	XM_001131147.1	LOC729732	XP_001131147.1	ILMN_1791297	0000630288	A	16	CCTCGCGGACCCAGCAAGCTCGCGCTCAGACGCCCCAGCTCCGCCGAGAG	8	-	12561283-12561332	8p23.1a	PREDICTED: Homo sapiens hypothetical protein LOC729732 (LOC729732), mRNA.					
Homo sapiens	RefSeq	NM_030820.2	ILMN_138693	COL21A1	NM_030820.2	NM_030820.2		81578	18780272	NM_030820.2	COL21A1	NP_110447.2	ILMN_1792736	0003440747	S	3530	CCTGGGATAGACAGTATTGGTGAACTACTCATTTACTACAGTGTCTCAGC	6	-	56029904-56029953	6p12.1b-p12.1a	Homo sapiens collagen, type XXI, alpha 1 (COL21A1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	COLA1L; MGC26619; dJ708F5.1; DKFZp564B052; dJ682J15.1	COLA1L; MGC26619; dJ708F5.1; DKFZp564B052; dJ682J15.1
Homo sapiens	RefSeq	NM_005230.2	ILMN_28067	ELK3	NM_005230.2	NM_005230.2		2004	44955920	NM_005230.2	ELK3	NP_005221.2	ILMN_1692335	0003420014	S	1375	AGGCTGCAAGGGCCAAGCACGCTGTTCCAGTTCCCCACACTGCTTAATGG	12	+	95177733-95177762:95184991-95185010	12q23.1a	Homo sapiens ELK3, ETS-domain protein (SRF accessory protein 2) (ELK3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12933792] [evidence IC ]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7958835] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12933792] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7851904] [evidence NAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 12933792] [evidence IDA]; Interacting selectively with a 30-bp purine-rich negative regulatory element; the best characterized such element is found in the first intronic region of the rat cardiac alpha-myosin heavy chain gene, and contains two palindromic high-affinity Ets-binding sites (CTTCCCTGGAAG). The presence of this element restricts expression of the gene containing it to cardiac myocytes [goid 32422] [pmid 12933792] [evidence IDA]	SAP2; NET; ERP	SAP2; NET; ERP
Homo sapiens	RefSeq	XM_001714310.1	ILMN_334820	LOC100134515	XM_001714310.1	XM_001714310.1		100134515	169170455	XM_001714310.1	LOC100134515	XP_001714362.1	ILMN_3235542	0006480224	S	122	CAAGATTGCCGCCTTCCTGCCAGCCTGACAGCTCTGGAAGTGGTTCGGCA	7	-	62370289-62370338		PREDICTED: Homo sapiens hypothetical protein LOC100134515 (LOC100134515), mRNA.					
Homo sapiens	RefSeq	NM_002711.2	ILMN_178092	PPP1R3A	NM_002711.2	NM_002711.2		5506	34304342	NM_002711.2	PPP1R3A	NP_002702.1	ILMN_2084506	0005860601	S	6456	TGAGAAGCCAAGCTCTTCAAGCACCTCTATCTCTGTACTCCTATATGAAG	7	-	113301890-113301939	7q31.1d	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 3A (glycogen and sarcoplasmic reticulum binding subunit, skeletal muscle) (PPP1R3A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]		PPP1R3; PP1G	PPP1R3; PP1G
Homo sapiens	RefSeq	NM_017832.2	ILMN_11933	C9ORF6	NM_017832.2	NM_017832.2		54942	20127565	NM_017832.2	C9orf6	NP_060302.1	ILMN_2191929	0003140280	S	1685	CTTCTGTCCCCCTTATGCCAACAAGATGGCCTTCCCCTCTGAAACAAAGT	9	+	110742620-110742669	9q31.3a	Homo sapiens chromosome 9 open reading frame 6 (C9orf6), mRNA.				CG-8; FLJ20457	CG-8; FLJ20457
Homo sapiens	RefSeq	NM_017832.2	ILMN_11933	C9ORF6	NM_017832.2	NM_017832.2		54942	20127565	NM_017832.2	C9orf6	NP_060302.1	ILMN_1685104	0004490348	S	1610	GTCCTAGCCCATCTGCCTCAACTCCTCTCCCTTTTAGGTTGTAGGGAAGA	9	+	110742545-110742594	9q31.3a	Homo sapiens chromosome 9 open reading frame 6 (C9orf6), mRNA.				CG-8; FLJ20457	CG-8; FLJ20457
Homo sapiens	RefSeq	XM_942944.1	ILMN_137771	LOC647447	XM_942944.1	XM_942944.1		647447	88988751	XM_942944.1	LOC647447	XP_948037.1	ILMN_1668709	0002490632	I	1014	AAGGAAAACCAACCAGAACCCTGGACAAGCTTTTTCTCTAATGGGAGAGA					PREDICTED: Homo sapiens hypothetical protein LOC647446, transcript variant 2 (LOC647447), mRNA.					
Homo sapiens	RefSeq	XR_017407.2	ILMN_173886	LOC440027	XR_017407.2	XR_017407.2		440027	169202503	XR_017407.2	LOC440027		ILMN_3276794	0006590768	M	347	GTAGCTCTATGACATTGATGTGGCCAAGGTCAACACCCTGATTCGGCCTG	11	+	9584603-9584652	11p15.4a	PREDICTED: Homo sapiens misc_RNA (LOC440027), miscRNA.					
Homo sapiens	RefSeq	XM_292085.2	ILMN_33466	LOC341457	XM_292085.2	XM_292085.2		341457	89035703	XM_292085.2	LOC341457	XP_292085.2	ILMN_1688127	0004730025	A	63	AGCCATGGTCAACCCCACCGTGTTCTTTGACACGGAGCCCTTGGGCCGCA	12	-	97509068-97509117	12q23.1c	PREDICTED: Homo sapiens similar to peptidylprolyl isomerase A isoform 1 (LOC341457), mRNA.					
Homo sapiens	RefSeq	XM_942611.1	ILMN_32417	LOC652886	XM_942611.1	XM_942611.1		652886	89065276	XM_942611.1	LOC652886	XP_947704.1	ILMN_1728193	0000240554	S	19	CTATTTGGCTCAACCCCCAAGCACCACCTCTTCCATCTTTACCAGCAGCT					PREDICTED: Homo sapiens similar to N-ethylmaleimide sensitive fusion protein (LOC652886), mRNA.					
Homo sapiens	RefSeq	NM_014258.2	ILMN_173326	SYCP2	NM_014258.2	NM_014258.2		10388	38373672	NM_014258.2	SYCP2	NP_055073.2	ILMN_2095704	0002690577	S	4887	GGATGAGAGGGAACCACTATAACATGAGTCCAAGCCCAGAAGACTTCTGT	20	-	58439161-58439210	20q13.32b-q13.33a	Homo sapiens synaptonemal complex protein 2 (SYCP2), mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [pmid 10341103] [evidence NAS]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [pmid 9592139] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10341103] [evidence NAS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; Progression through prophase of meiosis I; divided into several stages [goid 7128] [pmid 9592139] [evidence NAS]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [pmid 10341103] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10341103] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9592139] [evidence NAS]	SCP2	SCP2
Homo sapiens	RefSeq	NM_004350.1	ILMN_166428	RUNX3	NM_004350.2	NM_004350.2		864	110735400	NM_004350.2	RUNX3	NP_004341.1	ILMN_1787461	0001440564	I	4087	AACCATCCCAGAGCTGGCGAGAGGATGGAGCTGGGTGGAAACTGCTTTGC	1	-	25226135-25226184	1p36.11c	Homo sapiens runt-related transcription factor 3 (RUNX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7622058] [evidence NAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7607690] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence NAS]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence ISS]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7607690] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9751710] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 7835892] [evidence NAS]	FLJ34510; MGC16070; PEBP2aC; CBFA3; AML2	PEBP2aC; CBFA3; AML2
Homo sapiens	RefSeq	NR_003670.1	ILMN_349341	KGFLP2	NR_003670.1	NR_003670.1		654466	154816179	NR_003670.1	KGFLP2		ILMN_3238752	0007400609	S	4010	CTCTAGACTGCCAAAGAACATAAAGATGTACAAGGGGACCTAGCTGTAGT	9	-	41960106-41960155	9p12a	Homo sapiens keratinocyte growth factor-like protein 2 (KGFLP2), non-coding RNA.			The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Homo sapiens	RefSeq	NM_153376.1	ILMN_9047	CCDC96	NM_153376.2	NM_153376.2		257236	111548669	NM_153376.2	CCDC96	NP_699207.1	ILMN_1799710	0004670463	S	1481	TAGGAAGAGACATCCTGACCAAGACGAAGCAAGCCCGAGAGGGGCTGCGG	4	-	7094099-7094148	4p16.1e	Homo sapiens coiled-coil domain containing 96 (CCDC96), mRNA.				FLJ90575; MGC138479	MGC138479
Homo sapiens	RefSeq	NM_032051.1	ILMN_6488	PATZ1	NM_014323.2	NM_014323.2		23598	14670359	NM_014323.2	PATZ1	NP_055138.2	ILMN_1759297	0002320521	A	1903	CTGCCAGAGCTGTGGGAAAGGCTTCTCCAGGCCTGATCACTTGAACGGAC	22	-	31738926-31738946:31740318-31740346	22q12.2c	Homo sapiens POZ (BTB) and AT hook containing zinc finger 1 (PATZ1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10713105] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10713105] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 20404868] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10949935] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10713105] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZBTB19; MAZR; ZSG; PATZ; dJ400N23; ZNF278; RIAZ	ZBTB19; MAZR; ZSG; PATZ; dJ400N23; ZNF278; RIAZ
Homo sapiens	RefSeq	NM_014323.2	ILMN_6488	PATZ1	NM_014323.2	NM_014323.2		23598	14670359	NM_014323.2	PATZ1	NP_055138.2	ILMN_1660611	0004120494	I	2180	GCCTCCTACTTAAAGGTCCATGTTAAAACCCACCACGGTGTTCCCCTTCC	22	-	31724849-31724898	22q12.2c	Homo sapiens POZ (BTB) and AT hook containing zinc finger 1 (PATZ1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10713105] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10713105] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 20404868] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10949935] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10713105] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZBTB19; MAZR; ZSG; PATZ; dJ400N23; ZNF278; RIAZ	ZBTB19; MAZR; ZSG; PATZ; dJ400N23; ZNF278; RIAZ
Homo sapiens	RefSeq	NM_032567.2	ILMN_663	SPZ1	NM_032567.2	NM_032567.2		84654	24432021	NM_032567.2	SPZ1	NP_115956.2	ILMN_1761016	0002850048	S	1428	TCATGTTGCAAGAAAAGCTCTTAGGGGAAAAATGAGGTCAGCTAGCAGCC	5	+	79653026-79653075	5q14.1d	Homo sapiens spermatogenic leucine zipper 1 (SPZ1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ25709; NYD-TSP1	NYD-TSP1; FLJ25709
Homo sapiens	Unigene	Hs.571415	ILMN_123596	HS.571415	Hs.571415		Hs.571415		30219043	CB962925			ILMN_1850685	0002000746	S	522	GGTGGAGAGATGAGCAGATAGTCCTCAAAGGCAGACAGGGCTGGGGTTGG	8	-	97453405-97453454		AGENCOURT_13445090 NIH_MGC_187 Homo sapiens cDNA clone IMAGE:30319313 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001005783.1	ILMN_166413	HAO2	NM_001005783.1	NM_001005783.1		51179	54234013	NM_001005783.1	HAO2	NP_001005783.1	ILMN_1740402	0000460066	I	194	AGCTGGTGAGGCAGTGAAAATCCAGGGCCTAGAAAGCTGGGAATGCCATG	1	+	119724719-119724768	1p12a	Homo sapiens hydroxyacid oxidase 2 (long chain) (HAO2), transcript variant 2, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10777549] [evidence TAS]	Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [pmid 10777549] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: (S)-2-hydroxy-acid + O2 = 2-oxo acid + H2O2 [goid 3973] [pmid 10777549] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	HAOX2; GIG16	HAOX2; GIG16
Homo sapiens	RefSeq	NM_001017918.1	ILMN_4326	CYB561	NM_001017918.1	NM_001017918.1		1534	63054833	NM_001017918.1	CYB561	NP_001017918.1	ILMN_1729733	0000150270	I	3	TTCCTTGCACCCTCACCGCATATGGAACTCCTGGCGTCGTGTCCCAGGTC	17	-	58869211-58869260	17q23.3a	Homo sapiens cytochrome b-561 (CYB561), transcript variant 4, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7980462] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: 2 Fe2+ + NAD+ = 2 Fe3+ + NADH + H+ [goid 293] [pmid 14499595] [evidence ISS]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [pmid 7980462] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FRRS2	FRRS2
Homo sapiens	RefSeq	NM_080612.1	ILMN_164104	GAB3	NM_001081573.1	NM_001081573.1		139716	126091129	NM_001081573.1	GAB3	NP_001075042.1	ILMN_1805979	0006130754	S	4408	CCCAAGGGTCTCAAGCCTGCAAGTCCAGAAGGTGACAAACCCAGGAGCAC	X	-	153903809-153903858	Xq28g	Homo sapiens GRB2-associated binding protein 3 (GAB3), transcript variant 1, mRNA.		The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_006216.2	ILMN_1946	SERPINE2	NM_006216.2	NM_006216.2		5270	34147323	NM_006216.2	SERPINE2	NP_006207.1	ILMN_1655595	0005080192	S	1990	GTCTTGCTAGACAAGGTTGCTGTTGTGCAGTGTGCCTGTCACTACTGGTC	2	-	224548185-224548234	2q36.1d	Homo sapiens serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 (SERPINE2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3997857] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2877744] [evidence NAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [pmid 2877744] [evidence NAS]; Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [pmid 3997857] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [pmid 2877744] [evidence NAS]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 3997857] [evidence NAS]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 2877744] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 3997857] [evidence NAS]	PI7; GDN; PNI; PN1	PI7; GDN; PNI; PN1
Homo sapiens	RefSeq	XM_942590.1	ILMN_40344	LOC652874	XM_942590.1	XM_942590.1		652874	89065137	XM_942590.1	LOC652874	XP_947683.1	ILMN_1797897	0006520204	S	3	GGGACAAATTCAGAGAACTATGATTTTGACTCAAGGGCTCAACGAGGTGC					PREDICTED: Homo sapiens similar to neuroblastoma breakpoint family, member 3 (LOC652874), mRNA.					
Homo sapiens	RefSeq	NM_080817.2	ILMN_13231	GPR82	NM_080817.3	NM_080817.3		27197	142356892	NM_080817.3	GPR82	NP_543007.1	ILMN_1763500	0004920246	S	747	AGTTACCGTATACTACTCAGTCATAGAGGCTACAGAAGGAGAAGAGAGCC	X	+	41471730-41471779	Xp11.4a	Homo sapiens G protein-coupled receptor 82 (GPR82), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	XR_036957.1	ILMN_339306	LOC100129138	XR_036957.1	XR_036957.1		100129138	169161135	XR_036957.1	LOC100129138		ILMN_3258046	0006590563	M	911	GGGAGGAAGCCATGTGAGGGGGCCGGCTCTGTGGCAGATTGTAATAGCAT	1	+	104418013-104418049:104420890-104420902	1p21.1c	PREDICTED: Homo sapiens misc_RNA (LOC100129138), miscRNA.					
Homo sapiens	RefSeq	NM_138381.1	ILMN_137229	MGC15763	NM_138381.1	NM_138381.1		92106	19923906	NM_138381.1	MGC15763	NP_612390.1	ILMN_1764770	0003060278	S	944	CCTCGTGTTGATTGCAGGAGGAGTCGGAATTAACCCTCTGCTTTCCATCC	3	+	16318217-16318266	3p24.3e	Homo sapiens hypothetical protein BC008322 (MGC15763), mRNA.					
Homo sapiens	RefSeq	NM_017594.3	ILMN_24188	DIRAS2	NM_017594.3	NM_017594.3		54769	46198305	NM_017594.3	DIRAS2	NP_060064.2	ILMN_1742846	0005340605	S	3475	ACTTCCCTTCTATCCCCATGAGCCCCTCCTCCATCCAGCGACAAGCCATG	9	-	93372696-93372745	9q22.2b	Homo sapiens DIRAS family, GTP-binding RAS-like 2 (DIRAS2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Di-Ras2; DKFZp761C07121	Di-Ras2; DKFZp761C07121
Homo sapiens	Unigene	Hs.552684	ILMN_111093	HS.552684	Hs.552684		Hs.552684		34192759	BC037867			ILMN_1856081	0004230390	S	617	AGACCATTTTCCTGGAGGATGACCCAGTTTGGGAGTCACAGCCAGAGCTG	13	-	61476249-61476298		Homo sapiens cDNA clone IMAGE:5273211					
Homo sapiens	RefSeq	XM_938336.1	ILMN_137504	LOC649276	XM_938336.1	XM_938336.1		649276	88988383	XM_938336.1	LOC649276	XP_943429.1	ILMN_1661106	0005050554	S	1595	AGGATGTATGTCACCTCAGGACCCTGTGATGATTATGTTATCTGTATAAA					PREDICTED: Homo sapiens hypothetical protein LOC649276 (LOC649276), mRNA.					
Homo sapiens	RefSeq	NM_001031707.1	ILMN_3651	OGFOD1	NM_018233.3	NM_018233.3		55239	94536835	NM_018233.3	OGFOD1	NP_060703.3	ILMN_1653834	0000780647	I	181	CGGACGCTGTTACGGAAGAAACCTTGAAAAAGCAGGTGGCTGAGGCCTGG	16	+	55043105-55043154	16q13a-q13b	Homo sapiens 2-oxoglutarate and iron-dependent oxygenase domain containing 1 (OGFOD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1612; TPA1; FLJ10826	KIAA1612; FLJ10826
Homo sapiens	RefSeq	NM_001031707.1	ILMN_3651	OGFOD1	NM_018233.3	NM_018233.3		55239	94536835	NM_018233.3	OGFOD1	NP_060703.3	ILMN_1772690	0002510731	A	2105	GTTGTCCAGCCATCACCATCATCCATCTCCAGAAGTTTTCCATCTTCCCA	16	+	55067993-55068042	16q13a-q13b	Homo sapiens 2-oxoglutarate and iron-dependent oxygenase domain containing 1 (OGFOD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1612; TPA1; FLJ10826	KIAA1612; FLJ10826
Homo sapiens	RefSeq	NM_018233.2	ILMN_3651	OGFOD1	NM_018233.3	NM_018233.3		55239	94536835	NM_018233.3	OGFOD1	NP_060703.3	ILMN_1677953	0006330242	I	2771	GACACAGTGAGTCATCACATTTCCTCCCACTGCCTGTGGCCTTGTTCCAC	16	+	55068659-55068708	16q13a-q13b	Homo sapiens 2-oxoglutarate and iron-dependent oxygenase domain containing 1 (OGFOD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1612; TPA1; FLJ10826	KIAA1612; FLJ10826
Homo sapiens	RefSeq	XM_932115.1	ILMN_34637	LOC644302	XM_932115.1	XM_932115.1		644302	88954242	XM_932115.1	LOC644302	XP_937208.1	ILMN_1781016	0004230148	S	241	GCTGGTCTAAGAGTCGGGCGGCGGATCCTCCTGGGCCAGGGGCGCGGAGC	2	+	241737381-241737430	2q37.3f	PREDICTED: Homo sapiens hypothetical protein LOC644302 (LOC644302), mRNA.					
Homo sapiens	Unigene	Hs.171274	ILMN_80315	HS.171274	Hs.171274		Hs.171274		27836697	BX110878			ILMN_1866929	0002230093	S	157	CTCAAATGAAGAAAGCAGGCACAGGGAGGTTACTTGCCCAAGGTCACACC	18	-	28612451-28612500		BX110878 NCI_CGAP_Ut2 Homo sapiens cDNA clone IMAGp998I065377, mRNA sequence					
Homo sapiens	RefSeq	NM_005011.2	ILMN_172919	NRF1	NM_001040110.1	NM_001040110.1		4899	93141038	NM_001040110.1	NRF1	NP_001035199.1	ILMN_1656017	0003360376	S	2218	TCACCTGAGGAAAGAGGCTCCAGCATGGGGTGGGTCAGAGATGTGCTTGC	7	+	129182863-129182912	7q32.2a	Homo sapiens nuclear respiratory factor 1 (NRF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 7629110] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8034649] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	ALPHA-PAL	EWG; ALPHA-PAL
Homo sapiens	RefSeq	NM_007352.2	ILMN_19992	CELA3B	NM_007352.2	NM_007352.2		23436	58331212	NM_007352.2	CELA3B	NP_031378.1	ILMN_1749515	0007510072	S	34	GCCCAGTCAGCCCCCTTTGCTTACCTTCTGCCCTATATTAGAGCCCCAGG	1	+	22176038-22176087	1p36.12a	Homo sapiens chymotrypsin-like elastase family, member 3B (CELA3B), mRNA.					
Homo sapiens	RefSeq	NM_145872.1	ILMN_14072	ASB4	NM_016116.1	NM_016116.1		51666	7706378	NM_016116.1	ASB4	NP_057200.1	ILMN_1702618	0002320014	A	930	CCTGTTGAACCATGGGGCTGCCCGAATATACCCTCCACAGTTCCATAAGG	7	+	94995503-94995551:95003685-95003685	7q21.3b	Homo sapiens ankyrin repeat and SOCS box-containing 4 (ASB4), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		MGC142041; MGC142039; ASB-4	MGC142041; MGC142039; ASB-4
Homo sapiens	RefSeq	NM_016116.1	ILMN_14072	ASB4	NM_016116.1	NM_016116.1		51666	7706378	NM_016116.1	ASB4	NP_057200.1	ILMN_1676066	0001740605	I	1043	TCAGATGGAACACAAAGTGGAGAAGAGCTATCCCCGATGATGACTTGGAG	7	+	95003749-95003798	7q21.3b	Homo sapiens ankyrin repeat and SOCS box-containing 4 (ASB4), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		MGC142041; MGC142039; ASB-4	MGC142041; MGC142039; ASB-4
Homo sapiens	RefSeq	NM_012072.2	ILMN_175925	CD93	NM_012072.3	NM_012072.3		22918	88758612	NM_012072.3	CD93	NP_036204.2	ILMN_1704730	0006100615	S	6285	GTGGCAAGCAGTTCTTTTCAGCAGATTTTGCCCACTATTCCTCTGAGCTG	20	-	23060359-23060408	20p11.21c	Homo sapiens CD93 molecule (CD93), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9047234] [evidence IC ]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [pmid 11781389] [evidence NAS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [pmid 9047234] [evidence NAS]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [pmid 10092817] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 11994479] [evidence IDA]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [pmid 9047234] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with the C1q component of the classical complement cascade [goid 1849] [pmid 11781389] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9047234] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15459234] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15819698] [evidence IPI]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	MXRA4; C1qR(P); dJ737E23.1; C1QR1; CDw93; C1qRP	MXRA4; C1qR(P); CDw93; CD93; dJ737E23.1; C1qRP
Homo sapiens	RefSeq	XM_001720889.1	ILMN_340441	LOC100133012	XM_001720889.1	XM_001720889.1		100133012	169217344	XM_001720889.1	LOC100133012	XP_001720941.1	ILMN_3240003	0004290468	S	202	CTGAGACCACAAAGCGTCCGGCTGTGTGTGCTGCTCTGTTGTGAACTCCG	Y	+	12034352-12034395:12034396-12034401	Yq11.1b	PREDICTED: Homo sapiens hypothetical protein LOC100133012 (LOC100133012), mRNA.					
Homo sapiens	RefSeq	XM_001720754.1	ILMN_349676	LOC100130536	XM_001720754.1	XM_001720754.1		100130536	169168939	XM_001720754.1	LOC100130536	XP_001720806.1	ILMN_3269944	0002810370	M	176	CGCCCCAGGTCAGCGACTTACAACTCTTCATTCTGAAGTGCGTGTAGTGC				6p21.32b	PREDICTED: Homo sapiens hypothetical protein LOC100130536 (LOC100130536), mRNA.					
Homo sapiens	RefSeq	NM_177974.1	ILMN_14927	CASC4	NM_177974.1	NM_177974.1		113201	29826290	NM_177974.1	CASC4	NP_816929.1	ILMN_2325574	0003400138	A	2334	CATGAGTGCTGATGTGTTTTGGCAGATGAGCTTTCAGCTGAGGCCTGATG	15	+	42493788-42493837	15q15.3c	Homo sapiens cancer susceptibility candidate 4 (CASC4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC74708; H63; DKFZp459F1927	MGC74708; H63; DKFZp459F1927
Homo sapiens	RefSeq	XM_086287.3	ILMN_32886	PTPRV	NR_002930.1	NR_002930.1		148713	89886421	NR_002930.1	PTPRV		ILMN_1797827	0003800408	A	3795	TGCAGCAGGCAGGGTCTGAGTGCACCGTGGATGTCTTTAACGTGGCCCTG	1	+	200424662-200424711	1q32.1c-q32.1d	Homo sapiens protein tyrosine phosphatase, receptor type, V (pseudogene) (PTPRV), non-coding RNA.				OST-PTP; ESP; PTPRVP	
Homo sapiens	RefSeq	NM_014957.2	ILMN_26437	DENND3	NM_014957.2	NM_014957.2		22898	50345869	NM_014957.2	DENND3	NP_055772.2	ILMN_1692742	0002320722	S	5126	GTCTGCATTTTGGAGAGTCCACACCACGGACCAGGTTTTCCCCCAAGGCT	8	+	142205583-142205632	8q24.3c	Homo sapiens DENN/MADD domain containing 3 (DENND3), mRNA.				KIAA0870	KIAA0870
Homo sapiens	RefSeq	XM_933511.1	ILMN_36474	LOC643932	XM_933511.1	XM_933511.1		643932	88983826	XM_933511.1	LOC643932	XP_938604.1	ILMN_1679922	0007050465	A	62	AGGGGGCCAAGAAGAAAGTGACAATGATTGAAGCTCACGTTGACGTCAGG	5	-	78616117-78616147:78616435-78616453	5q14.1c	PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 2 (LOC643932), mRNA.					
Homo sapiens	RefSeq	XM_001721587.1	ILMN_348415	LOC100128988	XM_001721587.1	XM_001721587.1		100128988	169214860	XM_001721587.1	LOC100128988	XP_001721639.1	ILMN_3268547	0004830528	M	1393	ATGAGCCACCGCTCCTGGCCGGGTTTGCCTACATTTTGGAGATGCTGCAC				20q12b	PREDICTED: Homo sapiens similar to hCG2018847 (LOC100128988), mRNA.					
Homo sapiens	Unigene	Hs.545671	ILMN_108822	HS.545671	Hs.545671		Hs.545671		3240017	AI024404			ILMN_1904240	0001050692	S	29	GGACCACAGGCAACTACTGGAAATGGGGGTCTGAGAAGCTGATCCCAAGC	9	+	100731734-100731783		ov52d05.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1640937 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001008495.1	ILMN_3155	TMEM64	NM_001008495.1	NM_001008495.1		169200	56606065	NM_001008495.1	TMEM64	NP_001008495.1	ILMN_1682113	0004070047	S	1668	GGGGTGGGAATGGGCTCAACCTCCCAAAAAATTGGGGGAAACCTCCCTTG	8	-	91706908-91706957	8q21.3e	Homo sapiens transmembrane protein 64 (TMEM64), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp762C1112	DKFZp762C1112
Homo sapiens	RefSeq	NM_144674.1	ILMN_20525	TEKT5	NM_144674.1	NM_144674.1		146279	21389568	NM_144674.1	TEKT5	NP_653275.1	ILMN_1706832	0000050091	S	1276	CCCAACATGGAGCTGTGCAGGGACATCCCGCAGTTGAAGCTGGTGAACGA	16	-	10721644-10721656:10729621-10729657	16p13.13d	Homo sapiens tektin 5 (TEKT5), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC163208; FLJ32871; MGC163210	FLJ32871; MGC163208; MGC163210
Homo sapiens	RefSeq	NM_015677.1	ILMN_7327	SH3YL1	NM_015677.1	NM_015677.1		26751	7661669	NM_015677.1	SH3YL1	NP_056492.1	ILMN_1712231	0002570288	S	1882	GGGGCTACATTTGTTCATTTCCAGCAGTAGCATAAACTTACGGTGACATG	2	-	208188-208237	2p25.3g	Homo sapiens SH3 domain containing, Ysc84-like 1 (S. cerevisiae) (SH3YL1), mRNA.				FLJ39121; Ray; DKFZP586F1318	FLJ39121; Ray; DKFZP586F1318
Homo sapiens	RefSeq	NM_017739.1	ILMN_27913	POMGNT1	NM_017739.2	NM_017739.2		55624	116686123	NM_017739.2	POMGNT1	NP_060209.2	ILMN_1693664	0002940224	S	2602	GGCCCACATGCTGACACAGACTCACTCAGAGACCCTTAGACACTGGACCA	1	-	46427024-46427073	1p34.1a	Homo sapiens protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase (POMGNT1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 11709191] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 11709191] [evidence IDA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 [goid 3827] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: beta-D-galactosyl-1,3-(N-acetyl-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP [goid 47223] [pmid 11742540] [evidence IDA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3-(R1)-beta-D-mannosyl-R2 [goid 3827] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGAT1.2; FLJ20277; DKFZp761B182; GnTI.2; MEB	FLJ20277; MGAT1.2; GnTI.2; MEB
Homo sapiens	Unigene	Hs.583949	ILMN_136130	HS.583949	Hs.583949		Hs.583949		3744619	AI193410			ILMN_1913042	0003830259	S	162	CTTGCAGTCAGCCTTCATCTGCACAGCTGCCATGGCCTGTGCTTGTCTTA	8	-	94375066-94375115		qe58c04.x1 Soares_fetal_lung_NbHL19W Homo sapiens cDNA clone IMAGE:1743174 3, mRNA sequence					
Homo sapiens	Unigene	Hs.565170	ILMN_117696	HS.565170	Hs.565170		Hs.565170		565449	Z39654			ILMN_1875833	0002760767	S	89	CCCATCACCAACTTGCCAACCTTCCCACTTCCCACGGGTAATGATATTTA	18	-	13864952-13865001		HSC1FG082 normalized infant brain cDNA Homo sapiens cDNA clone c-1fg08 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000535.4	ILMN_173417	PMS2	NM_000535.4	NM_000535.4		5395	102470225	NM_000535.4	PMS2	NP_000526.1	ILMN_2329744	0005490189	A	814	GTTCAGCTGCCCCCTAGTGACTCCGTGTGTGAAGAGTACGGTTTGAGCTG	7	-	6003509-6003558	7p22.1b	Homo sapiens PMS2 postmeiotic segregation increased 2 (S. cerevisiae) (PMS2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10871409] [evidence IC ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 10871409] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10871409] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 11809883] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11793469] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with double-stranded DNA containing a single base insertion or deletion [goid 32138] [pmid 10871409] [evidence IDA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [pmid 16403449] [evidence IDA]	PMS2CL; PMSL2; HNPCC4	PMS2CL; HNPCC4; PMSL2
Homo sapiens	RefSeq	NM_015655.2	ILMN_3280	ZNF337	NM_015655.2	NM_015655.2		26152	34147336	NM_015655.2	ZNF337	NP_056470.1	ILMN_1663160	0000780324	S	2975	TCAGGTGCCCTTATGAAAAGGCTTGATAGAGGGAGTTTGTCCTGTGGCCC	20	-	25655023-25655072	20p11.21a	Homo sapiens zinc finger protein 337 (ZNF337), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_932919.1	ILMN_34782	LOC283340	XM_932919.1	XM_932919.1		283340	89031567	XM_932919.1	LOC283340	XP_938012.1	ILMN_1672738	0004890128	I	5	CTGCAGTCTTATGAAGAAGGTGCTTGGTTTCCTTAGGCCTCCTCAGACAT	10	+	98487297-98487346		PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 4 (LOC283340), mRNA.					
Homo sapiens	RefSeq	XM_001713800.1	ILMN_341020	LOC100131477	XM_001713800.1	XM_001713800.1		100131477	169207445	XM_001713800.1	LOC100131477	XP_001713852.1	ILMN_3240502	0001190014	S	3	GATCAGTGATGACTACTGTTGGTGTATGAGTCATATACGATGAATACATG					PREDICTED: Homo sapiens hypothetical protein LOC100131477 (LOC100131477), mRNA.					
Homo sapiens	RefSeq	XM_930334.1	ILMN_34707	LOC647274	XM_930334.1	XM_930334.1		647274	88966022	XM_930334.1	LOC647274	XP_935427.1	ILMN_1653410	0007160538	S	42	CAACCTCTTGCTGTTACAGAGACAGCCCTGCATTACCCACACCACGGCCT	3	-	186477202-186477233:186482392-186482409		PREDICTED: Homo sapiens similar to 60S acidic ribosomal protein P1 (LOC647274), mRNA.					
Homo sapiens	RefSeq	NM_004694.2	ILMN_14509	SLC16A6	NM_004694.3	NM_004694.3		9120	141802120	NM_004694.3	SLC16A6	NP_004685.2	ILMN_1729691	0005900564	S	2316	AAATACCAAGGTTCCCGTTAACAAATTACGGCCTCTGCTTGCTGGAAATG	17	-	66264629-66264678	17q24.2c	Homo sapiens solute carrier family 16, member 6 (monocarboxylic acid transporter 7) (SLC16A6), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9425115] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9425115] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of monocarboxylic acids into, out of, within or between cells [goid 15718] [pmid 9425115] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of monocarboxylic acids from one side of the membrane to the other. A monocarboxylic acid is an organic acid with one COOH group [goid 8028] [pmid 9425115] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MCT6; MCT7	MCT6
Homo sapiens	RefSeq	XM_372371.2	ILMN_32079	LOC390084	XM_372371.2	XM_372371.2		390084	89033758	XM_372371.2	LOC390084	XP_372371.2	ILMN_3280429	0002850132	M	695	AGGGTGAGGGAGATATGGCCAAAGCTCTAGGTACTTGTGGTTCCCACTTC	11	-	5945556-5945605	11p15.4c	PREDICTED: Homo sapiens similar to olfactory receptor, family 56, subfamily A, member 4 (LOC390084), mRNA.					
Homo sapiens	RefSeq	XM_932374.1	ILMN_39325	LOC644783	XM_932374.1	XM_932374.1		644783	89058189	XM_932374.1	LOC644783	XP_937467.1	ILMN_1651380	0001660735	S	255	CGCCCCTGTAGGGACAGCCCACTTCCAGGCCCCGCCCTTGATCCCGCCTC	21	+	36450735-36450784		PREDICTED: Homo sapiens hypothetical protein LOC644783 (LOC644783), mRNA.					
Homo sapiens	RefSeq	NM_001776.3	ILMN_307349	ENTPD1	NM_001098175.1	NM_001098175.1		953	147905699	NM_001098175.1	ENTPD1	NP_001091645.1	ILMN_1773125	0005550279	S	1774	TCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC	10	+	97604334-97604383	10q23.33d	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 1 (ENTPD1), transcript variant 2, mRNA.	A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8955160] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7930580] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7930580] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 8955160] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside diphosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with diphosphate on its glycose moiety [goid 9181] [evidence IEA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	FLJ40959; DKFZp686D194; NTPDase-1; FLJ40921; ATPDase; DKFZp686I093; CD39	NTPDase-1; ATPDase; CD39
Homo sapiens	RefSeq	NM_005941.2	ILMN_14850	MMP16	NM_005941.4	NM_005941.4		4325	149999366	NM_005941.4	MMP16	NP_005932.2	ILMN_1718331	0003990537	I	2699	GGTGGGAGATTTGGAATACACATGCAGGACGTTAGACTGTTGGGACAGCC	8	-	89130988-89131037	8q21.3b-q21.3c	Homo sapiens matrix metallopeptidase 16 (membrane-inserted) (MMP16), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7559440] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7559440] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 7559440] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [pmid 7559440] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 7559440] [evidence TAS]	MT-MMP3; MT3-MMP; MMP-X2; MT-MMP2	MT-MMP3; MT3-MMP; MMP-X2; MT-MMP2
Homo sapiens	RefSeq	NM_004337.1	ILMN_21417	OSGIN2	NM_004337.1	NM_004337.1		734	4757889	NM_004337.1	OSGIN2	NP_004328.1	ILMN_1757732	0002070309	S	2320	CTCTCAGGCCCCACAACTTACTTCCTGCATTTTAACAAGATCCCCAAGGG	8	+	91007391-91007440	8q21.3d	Homo sapiens oxidative stress induced growth inhibitor family member 2 (OSGIN2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence NAS]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 9933573] [evidence ND ]	C8orf1; hT41	C8orf1; hT41
Homo sapiens	RefSeq	NM_203289.2	ILMN_26895	POU5F1	NM_203289.2	NM_203289.2		5460	54112127	NM_203289.2	POU5F1	NP_976034.2	ILMN_1665632	0005550577	I	52	ATTTGTGGGTAGGTTATTTCTAGAAGTTAGGTGGGCAGCTTGGAAGGCAG	6	-	31241923-31241972	6p21.33a	Homo sapiens POU domain, class 5, transcription factor 1 (POU5F1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16153702] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18281244] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 16153702] [evidence IDA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9814708] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 16153702] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11891324] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	OTF4; OCT3; MGC22487; Oct4; OTF3	OTF4; OCT3; MGC22487; Oct4; OTF3
Homo sapiens	RefSeq	NM_000342.1	ILMN_182955	SLC4A1	NM_000342.2	NM_000342.2		6521	142360743	NM_000342.2	SLC4A1	NP_000333.1	ILMN_1772809	0002120152	S	3450	CCAGGCCTTCTGATTTCAAGGTCCGAGCTCTGTCCTCTGTCAGTCATGCG	17	-	39682702-39682751	17q21.31c	Homo sapiens solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group) (SLC4A1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 4027230] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [pmid 16669616] [evidence IDA]	The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [pmid 4027230] [evidence TAS]; The regulation of the levels, transport, and metabolism of ions within a cell or between a cell and its external environment [goid 6873] [pmid 8841202] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA];  [goid 5452] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16669616] [evidence IPI]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [pmid 4027230] [evidence TAS]	MGC126619; MGC116750; MGC126623; BND3; MGC116753; DI; CD233; WD; WD1; EMPB3; AE1; SW; EPB3; RTA1A; FR; WR	MGC126619; MGC116750; MGC126623; BND3; MGC116753; CD233; DI; WD; EMPB3; WD1; AE1; EPB3; SW; RTA1A; FR; WR
Homo sapiens	RefSeq	NM_032731.2	ILMN_8122	TXNDC17	NM_032731.3	NM_032731.3		84817	153791420	NM_032731.3	TXNDC17	NP_116120.1	ILMN_1659437	0005560594	S	483	CACCTCAAAAACTGGTAGAATCTGAGTGTCTTCAGGCCAACCTGGTGGAA	17	+	6486367-6486368:6486995-6487042	17p13.2a	Homo sapiens thioredoxin domain containing 17 (TXNDC17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14607844] [evidence IDA]	A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [pmid 14607844] [evidence IMP]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [pmid 14607844] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14607844] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 15355959] [evidence IDA]; Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+ [goid 47134] [pmid 15355959] [evidence IDA]; Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+ [goid 47134] [pmid 18579519] [evidence IDA]; Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+ [goid 47134] [pmid 14607844] [evidence IDA]	TRP14; MGC14353; TXNL5	TRP14; MGC14353
Homo sapiens	RefSeq	XM_945003.1	ILMN_46056	LOC651896	XM_945003.1	XM_945003.1		651896	88999496	XM_945003.1	LOC651896	XP_950096.1	ILMN_1794271	0003830017	S	90	GTCCAGGGAACTGGGTGTCAAAGTCAATGCCTGTGATGGGAGAGCTGCTC					PREDICTED: Homo sapiens hypothetical protein LOC651896 (LOC651896), mRNA.					
Homo sapiens	Unigene	Hs.578483	ILMN_130664	HS.578483	Hs.578483		Hs.578483		83079739	DB341777			ILMN_1907685	0007040576	S	220	GAGGTAGAGGGTCAGGCAGGGAGGCCAAGCCACTGTAAGCTCTGTTTGCA	15	+	67900368-67900417		DB341777 TESTI4 Homo sapiens cDNA clone TESTI4047173 3, mRNA sequence					
Homo sapiens	RefSeq	XM_927433.1	ILMN_31459	LOC644172	XM_927372.2	XM_927372.2		644172	113426924	XM_927372.2	LOC644172	XP_932465.2	ILMN_1772603	0000240022	S	488	CCTGCCTCTCCAAGGACTCCACGCCTGACGAACCCGACGTCCATTTCTCC	17	-	41034782-41034831	17q21.31d	PREDICTED: Homo sapiens similar to C-jun-amino-terminal kinase-interacting protein 1 (JNK-interacting protein 1) (JIP-1) (JNK MAP kinase scaffold protein 1) (Islet-brain 1) (IB-1) (Mitogen-activated protein kinase 8-interacting protein 1) (LOC644172), mRNA.					
Homo sapiens	RefSeq	XM_927372.1	ILMN_31459	LOC644172	XM_927372.2	XM_927372.2		644172	113426924	XM_927372.2	LOC644172	XP_932465.2	ILMN_1707887	0005550022	S	284	AATCGAGGCACCTCCACCAACAGCCCACGCTGCTGGTAGATGAGCACGCG	17	-	41034986-41035035	17q21.31d	PREDICTED: Homo sapiens similar to C-jun-amino-terminal kinase-interacting protein 1 (JNK-interacting protein 1) (JIP-1) (JNK MAP kinase scaffold protein 1) (Islet-brain 1) (IB-1) (Mitogen-activated protein kinase 8-interacting protein 1) (LOC644172), mRNA.					
Homo sapiens	RefSeq	XM_376814.3	ILMN_35500	MGC13005	XM_376814.4	XM_376814.4		84771	113420588	XM_376814.4	MGC13005	XP_376814.3	ILMN_1671226	0004280477	S	497	GCATAGTGCTCCTGGATTAGTGATACACCCGGCACCCTGTCCTGGACAAG	9	+	3367-3372:3373-3416	9p24.3b	PREDICTED: Homo sapiens hypothetical protein MGC13005 (MGC13005), mRNA.					
Homo sapiens	RefSeq	XM_926948.1	ILMN_35500	MGC13005	XM_376814.4	XM_376814.4		84771	113420588	XM_376814.4	MGC13005	XP_376814.3	ILMN_1705605	0000450228	S	1364	ACACCAGCAATTGTGCCAAGGGCCATTAGGCTCTCAGCATGACTATTTTT	9	+	4234-4283	9p24.3b	PREDICTED: Homo sapiens hypothetical protein MGC13005 (MGC13005), mRNA.					
Homo sapiens	RefSeq	XM_935751.1	ILMN_168552	LOC641977	XM_001133108.1	XM_001133108.1		641977	113418511	XM_001133108.1	LOC641977	XP_001133108.1	ILMN_1790759	0000160037	S	776	ATGGTGAACATTGTGATTTTACAGTTTTAAGAAATATGTTGATAAGAAAA	7	-	45743032-45743034:45750149-45750150:45751121-45751165	7p13b	PREDICTED: Homo sapiens similar to cell division cycle 10 homolog (LOC641977), mRNA.					
Homo sapiens	RefSeq	NM_018254.2	ILMN_15381	RCOR3	NM_018254.2	NM_018254.2		55758	33620752	NM_018254.2	RCOR3	NP_060724.1	ILMN_1682095	0003800431	S	3603	CTCTTCTATCCCAGACATGGGCCAAGGTGCTGTATCTGAGGGATGTGCTG	1	+	209555716-209555765	1q32.2c-q32.3a	Homo sapiens REST corepressor 3 (RCOR3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	FLJ10876; RP11-318L16.1; FLJ16298	FLJ10876; RP11-318L16.1; FLJ16298
Homo sapiens	RefSeq	NM_001080429.1	ILMN_171009	KIAA1543	NM_001080429.1	NM_001080429.1		57662	122937254	NM_001080429.1	KIAA1543	NP_001073898.1	ILMN_2273609	0006290017	I	3357	GGAAAATGGCAGCAATGCCTCCTCCCCAGCGTCAGTGCCCGAGTACACAG				19p13.2e	Homo sapiens KIAA1543 (KIAA1543), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	XM_001716087.1	ILMN_341367	LOC100130172	XM_001716087.1	XM_001716087.1		100130172	169167522	XM_001716087.1	LOC100130172	XP_001716139.1	ILMN_3183990	0005720259	A	559	CAGGAAGCTCTCAGGCACCTCTTGCCCGAACAAACTTGGGAGTACAGGCT	5	+	137399931-137399980	5q31.2c	PREDICTED: Homo sapiens hypothetical protein LOC100130172 (LOC100130172), mRNA.					
Homo sapiens	RefSeq	NM_006055.1	ILMN_168179	LANCL1	NM_006055.1	NM_006055.1		10314	5174444	NM_006055.1	LANCL1	NP_006046.1	ILMN_2081988	0004150138	S	4321	CTTCCGCTAAGTAAGAGCACCTCATTCCTGTGTTTTCTCTACTATTGAGC	2	-	211004389-211004438	2q34b	Homo sapiens LanC lantibiotic synthetase component C-like 1 (bacterial) (LANCL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9512664] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9512664] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 9512664] [evidence TAS]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [pmid 15082773] [evidence IDA]	p40; GPR69A	p40; GPR69A
Homo sapiens	RefSeq	NM_198443.1	ILMN_8454	NRN1L	NM_198443.1	NM_198443.1		123904	38348201	NM_198443.1	NRN1L	NP_940845.1	ILMN_1711359	0000060072	S	305	AGTGTGGGAATCACTACAGCAAGAAGCTCGCCAGGCCCCCCGTCCGAATA	16	+	66477444-66477493	16q22.1b	Homo sapiens neuritin 1-like (NRN1L), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			UNQ2446; MGC118993; MGC118990	UNQ2446; MGC118993; MGC118990
Homo sapiens	RefSeq	XM_001726245.1	ILMN_333832	LOC100128672	XM_001726245.1	XM_001726245.1		100128672	169211537	XM_001726245.1	LOC100128672	XP_001726297.1	ILMN_3251837	0002630075	M	79	TACCCTTGGAACCATCGAGGAGCTGGGATTTGCTTTAGAGAGGGGCAGCC				17q25.3a	PREDICTED: Homo sapiens hypothetical protein LOC100128672 (LOC100128672), mRNA.					
Homo sapiens	RefSeq	XM_942822.1	ILMN_4806	BCL10	NM_003921.3	NM_003921.3		8915	119466529	NM_003921.3	BCL10	NP_003912.1	ILMN_1704070	0001340037	S	282	GCCACGCCTGCGCAGGTCGTCGGGGGAGACTGATGAAGAGACGACTATCC	1	-	85742409-85742458	1p22.3e	Homo sapiens B-cell CLL/lymphoma 10 (BCL10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16280327] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11278692] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11053425] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11021819] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15082780] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 15082780] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12154360] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15125833] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15122200] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17468049] [evidence EXP]; A protein complex comprising Carma1, Bcl10 and MALT1; plays a role in signal transduction during NF-kappaB activation [goid 32449] [pmid 15125833] [evidence NAS]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 12154360] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; A multiprotein complex that consists of at least three proteins, CD14, TLR4, and MD-2, each of which is glycosylated [goid 46696] [pmid 16831874] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 16127295] [evidence IDA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [pmid 11163238] [evidence ISS]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2224] [pmid 16831874] [evidence IC ]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [pmid 16831874] [evidence IEP]; An immune response based on directed amplification of specific receptors for antigen produced through a somatic diversification process, and allowing for enhanced response to subsequent exposures to the same antigen (immunological memory) [goid 2250] [pmid 16831874] [evidence TAS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of mature B cell apoptosis [goid 2906] [pmid 15878976] [evidence IDA]; A defense response that is mediated by cells [goid 6968] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 10400625] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus [goid 9620] [evidence IEA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [pmid 14695475] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of mast cell cytokine production [goid 32765] [pmid 16647297] [evidence NAS]; The chemical reactions and pathways resulting in the formation of the cytokine lymphotoxin A [goid 42109] [pmid 16647297] [evidence NAS]; The chemical reactions and pathways resulting in the formation of interleukin-6 [goid 42226] [pmid 16647297] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 15125833] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 16831874] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-8 [goid 45416] [pmid 17095757] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 15207693] [evidence IDA]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50856] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 14695475] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 10400625] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 16831874] [evidence ISS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 16831874] [evidence TAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15207693] [evidence IDA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11053425] [evidence IPI]; Increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19209] [pmid 15125833] [evidence IDA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [pmid 16395405] [evidence IPI]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [pmid 15082780] [evidence IDA]; Interacting selectively with protein kinase B, an intracellular kinase that is important in regulating glucose metabolism [goid 43422] [pmid 16280327] [evidence IPI]; Interacting selectively with a domain within the same polypeptide [goid 43621] [pmid 15125833] [evidence IPI]; Interacting selectively with NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters [goid 51059] [pmid 16280327] [evidence IDA]	mE10; CARMEN; CLAP; CIPER; c-E10	
Homo sapiens	Unigene	Hs.571661	ILMN_123842	HS.571661	Hs.571661		Hs.571661		30460596	BX387364			ILMN_1829707	0002970400	S	777	AGAGCGGAACGTCGGGCTTCCCGGGTCTGACAACTGATTGGAATCGGCTT	9	+	130978484-130978533		BX387364 Homo sapiens NEUROBLASTOMA COT 25-NORMALIZED Homo sapiens cDNA clone CS0DC006YA13 3-PRIME, mRNA sequence					
Homo sapiens	RefSeq	NM_000164.2	ILMN_29333	GIPR	NM_000164.2	NM_000164.2		2696	45545425	NM_000164.2	GIPR	NP_000155.1	ILMN_2082005	0001850382	S	1802	GAGCTGGAGAACAGGATTCTAGGCGGAAGCGATAGCATAGGCAAAGGCCC	19	+	46185495-46185544	19q13.32a	Homo sapiens gastric inhibitory polypeptide receptor (GIPR), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7556958] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7556958] [evidence TAS]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 7556958] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 7589426] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 7556958] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with gastric inhibitory peptide to initiate a change in cell activity [goid 16519] [evidence IEA]	MGC126722	MGC126722
Homo sapiens	RefSeq	NM_001858.4	ILMN_178287	COL19A1	NM_001858.4	NM_001858.4		1310	61698136	NM_001858.4	COL19A1	NP_001849.2	ILMN_2116605	0006510673	S	8627	CAAAATCCCACATGGGCATAATGCTTTGAGGCCTTGATTCCTACATGTTC	6	+	70919905-70919954	6q13a	Homo sapiens collagen, type XIX, alpha 1 (COL19A1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [pmid 7775380] [evidence NAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9143499] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 1639419] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [pmid 1639419] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 7775380] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 1639419] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 1639419] [evidence NAS]	D6S228E; COL9A1L	D6S228E; COL9A1L
Homo sapiens	RefSeq	NM_001858.4	ILMN_178287	COL19A1	NM_001858.4	NM_001858.4		1310	61698136	NM_001858.4	COL19A1	NP_001849.2	ILMN_1795843	0003800280	S	8194	GCGTGTTCAGATCCAATAGTGAGTGATGTGGTACAACTGGAGGAGTTAGC	6	+	70919472-70919521	6q13a	Homo sapiens collagen, type XIX, alpha 1 (COL19A1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [pmid 7775380] [evidence NAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9143499] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 1639419] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [pmid 1639419] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 7775380] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 1639419] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 1639419] [evidence NAS]	D6S228E; COL9A1L	D6S228E; COL9A1L
Homo sapiens	RefSeq	NM_001031728.1	ILMN_34868	C9ORF100	NM_032818.2	NM_032818.2		84904	90652856	NM_032818.2	C9orf100	NP_116207.2	ILMN_1717403	0006840039	A	1494	GAACCAGCCCCTAACACAGATGAGGGGATTTGGGACTGATAAGCTCTGTG	9	-	35661560-35661609	9p13.3a	Homo sapiens chromosome 9 open reading frame 100 (C9orf100), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	RP11-331F9.7; FLJ14642; MGC44886	RP11-331F9.7; FLJ14642; MGC44886
Homo sapiens	RefSeq	NM_032818.2	ILMN_34868	C9ORF100	NM_032818.2	NM_032818.2		84904	90652856	NM_032818.2	C9orf100	NP_116207.2	ILMN_3251418	0003840433	S	3365	CAGCCCCTCAGGAATTTGAAGGCAATGGTCACACCCTCACCCACTTTCCT	9	-	35659689-35659738	9p13.3a	Homo sapiens chromosome 9 open reading frame 100 (C9orf100), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	RP11-331F9.7; FLJ14642; MGC44886	RP11-331F9.7; FLJ14642; MGC44886
Homo sapiens	RefSeq	NM_001031728.1	ILMN_34868	C9ORF100	NM_032818.2	NM_032818.2		84904	90652856	NM_032818.2	C9orf100	NP_116207.2	ILMN_1667405	0004760482	I	863	TTCACTGATGTGCTCCTCATGGCCAAGCCTCGGCCTCCACTGCACCTGCT	9	-	35662611-35662660	9p13.3a	Homo sapiens chromosome 9 open reading frame 100 (C9orf100), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	RP11-331F9.7; FLJ14642; MGC44886	RP11-331F9.7; FLJ14642; MGC44886
Homo sapiens	RefSeq	XM_941040.1	ILMN_42506	LOC654208	XM_941040.1	XM_941040.1		654208	89066900	XM_941040.1	LOC654208	XP_946133.1	ILMN_1714851	0000830544	S	14	GACAAAGAATCTGGTGGACAGTAATAAACTTTGGTGGAATTTCAGGAACC					PREDICTED: Homo sapiens similar to FRG1 protein (FSHD region gene 1 protein) (LOC654208), mRNA.					
Homo sapiens	RefSeq	NM_001017977.1	ILMN_17273	DCAF6	NM_001017977.1	NM_001017977.1		55827	63252909	NM_001017977.1	DCAF6	NP_001017977.1	ILMN_2392080	0005080594	A	2669	CGAACTCATGCTGGAAGAAACTAGAAACACCATTACAGTTCCAGCCTCTT	1	+	166304234-166304283	1q24.2a	Homo sapiens DDB1 and CUL4 associated factor 6 (DCAF6), transcript variant 2, mRNA.				RP4-745I14.1; ARCAP; PC326; MSTP055; 1200006M05Rik; NRIP	RP4-745I14.1; ARCAP; PC326; MSTP055; 1200006M05Rik; NRIP
Homo sapiens	RefSeq	NM_018442.2	ILMN_17273	DCAF6	NM_001017977.1	NM_001017977.1		55827	63252909	NM_001017977.1	DCAF6	NP_001017977.1	ILMN_1670000	0001660307	A	2746	ATCATATCCGAGCTGACCGGTTGGAGGGTGACAGATCAGAAGGCTCTGGT	1	+	166304311-166304325:166311233-166311267	1q24.2a	Homo sapiens DDB1 and CUL4 associated factor 6 (DCAF6), transcript variant 2, mRNA.				RP4-745I14.1; ARCAP; PC326; MSTP055; 1200006M05Rik; NRIP	RP4-745I14.1; ARCAP; PC326; MSTP055; 1200006M05Rik; NRIP
Homo sapiens	RefSeq	XM_940741.1	ILMN_32947	LOC651568	XM_940741.1	XM_940741.1		651568	89066722	XM_940741.1	LOC651568	XP_945834.1	ILMN_1691361	0004050605	S	81	CTCAAGCACAGTTGGAACATTCTGCGAGAAAGACCACATACTAGACCACT					PREDICTED: Homo sapiens hypothetical protein LOC651568 (LOC651568), mRNA.					
Homo sapiens	RefSeq	NM_001029880.1	ILMN_5290	SFMBT2	NM_001029880.1	NM_001029880.1		57713	71274153	NM_001029880.1	SFMBT2	NP_001025051.1	ILMN_1660125	0004920066	S	4302	AGCACACTGTCTCCTGCTGGCATTCACCCCACTCATGCTGGAAAGGAAGA	10	-	7247803-7247852	10p14e	Homo sapiens Scm-like with four mbt domains 2 (SFMBT2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]			
Homo sapiens	RefSeq	NM_020779.3	ILMN_9034	WDR35	NM_020779.3	NM_020779.3		57539	56243598	NM_020779.3	WDR35	NP_065830.2	ILMN_2335304	0006110201	A	6446	ACTAACAAACTCTCCCTTGACTAGGGGGACAAAGAAAAGCAAAACTGACC	2	-	20110444-20110493	2p24.1d	Homo sapiens WD repeat domain 35 (WDR35), transcript variant 2, mRNA.				KIAA1336; MGC33196	KIAA1336; MGC33196
Homo sapiens	RefSeq	NM_032857.2	ILMN_24565	LACTB	NM_032857.2	NM_032857.2		114294	26051230	NM_032857.2	LACTB	NP_116246.2	ILMN_1703335	0001570669	I	1493	ATACTGGAGGGGCAGTGGGTGCCAGTAGTGTCCTGCTGGTCCTTCCTGAA	15	+	61220867-61220916	15q22.2b	Homo sapiens lactamase, beta (LACTB), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ14902; G24; MRPL56	FLJ14902; G24; MRPL56
Homo sapiens	RefSeq	NM_171846.1	ILMN_24565	LACTB	NM_032857.2	NM_032857.2		114294	26051230	NM_032857.2	LACTB	NP_116246.2	ILMN_1765132	0000460373	A	1092	CCATGACTTGGATATGCTGACGACTGTGCAGGAAGAAAACGAGCCAGTGA	15	+	61208837-61208886	15q22.2b	Homo sapiens lactamase, beta (LACTB), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ14902; G24; MRPL56	FLJ14902; G24; MRPL56
Homo sapiens	RefSeq	NM_144640.2	ILMN_9576	IL17RE	NM_153481.1	NM_153481.1		132014	24430205	NM_153481.1	IL17RE	NP_705614.1	ILMN_1689718	0001450110	A	2277	TGGAGAGGTTGGGGCCGGGGTAGGGAGGCAGGAGCCATGTCAGTTCTGAA	3	+	9932795-9932844	3p25.3c	Homo sapiens interleukin 17 receptor E (IL17RE), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC71884; FLJ23658	MGC71884; FLJ23658
Homo sapiens	RefSeq	XM_932410.1	ILMN_169466	LOC728340	XM_001130218.1	XM_001130218.1		728340	113416577	XM_001130218.1	LOC728340	XP_001130218.1	ILMN_1689083	0006350113	I	1363	GAGATAAAGAATGCCATAGTTATGATTGAAATGACTCGTTGCTAAATAGA	5	+	68918061-68918110	5q13.2a	PREDICTED: Homo sapiens similar to TFIIH basal transcription factor complex p44 subunit (Basic transcription factor 2 44 kDa subunit) (BTF2-p44) (General transcription factor IIH polypeptide 2), transcript variant 4 (LOC728340), mRNA.					
Homo sapiens	RefSeq	XR_000664.1	ILMN_3976	REG1P	NR_002714.1	NR_002714.1		5969	84871995	NR_002714.1	REG1P		ILMN_1785302	0002260440	A	2504	CTATTTATCTCTGAGGATCGACCGGGGACTGGGATAGAGGAAGGGTGAGC	2	-	79363000-79363049	2p12e	Homo sapiens regenerating islet-derived 1 pseudogene (REG1P), non-coding RNA.				RS	
Homo sapiens	RefSeq	XM_946003.1	ILMN_33678	LOC650526	XM_946003.1	XM_946003.1		650526	89042867	XM_946003.1	LOC650526	XP_951096.1	ILMN_1661255	0000650026	I	3925	CACCATGCTCTGGGCCTAATACAGTCTTTTCCTATTGAAAAGTGACGGTT					PREDICTED: Homo sapiens similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 8 (LOC650526), mRNA.					
Homo sapiens	RefSeq	XM_942199.1	ILMN_38008	LOC652644	XM_942199.1	XM_942199.1		652644	89063460	XM_942199.1	LOC652644	XP_947292.1	ILMN_1786163	0001190669	S	256	GGGCATCTAGCCCCCAATCACATCCTCCTATCCCTTTCTCTGCCCCCAAA					PREDICTED: Homo sapiens similar to tumor protein p53 inducible protein 5 (LOC652644), mRNA.					
Homo sapiens	RefSeq	XM_927390.1	ILMN_31604	LOC644197	XM_927390.1	XM_927390.1		644197	88976567	XM_927390.1	LOC644197	XP_932483.1	ILMN_1698120	0001580672	S	57	GCTCCAGTATTCGTTGATAGAGAAGCAGTTAGCAGCTGCATATGCCGCCC	4	+	90247022-90247071		PREDICTED: Homo sapiens hypothetical protein LOC644197 (LOC644197), mRNA.					
Homo sapiens	RefSeq	XM_497707.2	ILMN_39077	LOC648366	XM_497707.2	XM_497707.2		648366	89065685	XM_497707.2	LOC648366	XP_497707.2	ILMN_1755910	0003310450	S	34	CTCACAGAGCAGATGAAATGCCTGGACCAGCAGTGTGAGCTTCGGGTGCA					PREDICTED: Homo sapiens similar to SLIT-ROBO Rho GTPase-activating protein 2 (srGAP2) (Formin-binding protein 2) (LOC648366), mRNA.					
Homo sapiens	RefSeq	XM_940923.1	ILMN_33413	LOC651711	XM_940923.1	XM_940923.1		651711	89058017	XM_940923.1	LOC651711	XP_946016.1	ILMN_1814579	0000290681	S	2892	GCAGGAGCAGTGCAGAGCGACCTGAAAGAAGGTGGTTCTCATTCATCTCT					PREDICTED: Homo sapiens hypothetical protein LOC651711 (LOC651711), mRNA.					
Homo sapiens	RefSeq	XM_001726999.1	ILMN_348572	LOC728341	XM_001726999.1	XM_001726999.1		728341	169218269	XM_001726999.1	LOC728341	XP_001727051.1	ILMN_3304505	0007000541	M	255	CTGTGGGTCCAGCTGCTGTGGCCAAACCAGCTGTGGGTCCAGCTGCTGCC				17q21.2a	PREDICTED: Homo sapiens hypothetical LOC728341 (LOC728341), partial mRNA.					
Homo sapiens	RefSeq	NM_022913.1	ILMN_7071	GPBP1	NM_022913.1	NM_022913.1		65056	28875781	NM_022913.1	GPBP1	NP_075064.1	ILMN_2233493	0001090692	S	2435	GGACCGTGGAAGAACAGCACTTTCAAACCCACAACTGAGAATGATGACAC	5	+	56594244-56594293	5q11.2f	Homo sapiens GC-rich promoter binding protein 1 (GPBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GPBP; DKFZp761C169; MGC126339	GPBP; DKFZp761C169; MGC126339
Homo sapiens	RefSeq	NM_022913.1	ILMN_7071	GPBP1	NM_022913.1	NM_022913.1		65056	28875781	NM_022913.1	GPBP1	NP_075064.1	ILMN_1711792	0006480315	S	2174	GGCAATGCCTCAGTGATTTCCCAGCAGATCATTCGGTCTTCAACCTTCCC	5	+	56582634-56582683	5q11.2f	Homo sapiens GC-rich promoter binding protein 1 (GPBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GPBP; DKFZp761C169; MGC126339	GPBP; DKFZp761C169; MGC126339
Homo sapiens	RefSeq	NM_177414.1	ILMN_5681	PPAP2B	NM_177414.1	NM_177414.1		8613	29171741	NM_177414.1	PPAP2B	NP_803133.1	ILMN_2408683	0006220097	A	2623	CCGTAAGTGTCCTTCCATGCAAGGTCCCACTCTAGGTGATAGACAGGGAC	1	-	56960987-56961036	1p32.2c	Homo sapiens phosphatidic acid phosphatase type 2B (PPAP2B), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9705349] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9705349] [evidence NAS]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [pmid 9305923] [evidence TAS]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [pmid 9705349] [evidence TAS]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [pmid 9705349] [evidence EXP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = a lipid + phosphate [goid 42577] [evidence IEA]	MGC15306; LPP3; Dri42; VCIP; PAP2-beta; PAP2-b; PAP-2b	MGC15306; LPP3; Dri42; VCIP; PAP2-beta; PAP2-b; PAP-2b
Homo sapiens	RefSeq	NM_012223.2	ILMN_175452	MYO1B	NM_012223.2	NM_012223.2		4430	44889480	NM_012223.2	MYO1B	NP_036355.2	ILMN_2093027	0005720598	S	4477	ACAGGGTGCCTATTTTAGTCATGGATCAAAATTTGTGTAACTTGCAGGGC	2	+	191997939-191997988	2q32.3a	Homo sapiens myosin IB (MYO1B), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	myr1	myr1
Homo sapiens	RefSeq	XM_938856.1	ILMN_138732	PARD6G	XM_938856.1	XM_938856.1		84552	89047537	XM_938856.1	PARD6G	XP_943949.1	ILMN_1689244	0006450068	I	17	CCTGGGACGGCCTCAGGGAGCTTTTACTCATGGCAGAAGGCAAGATGGGA				18q23d	PREDICTED: Homo sapiens par-6 partitioning defective 6 homolog gamma (C. elegans) (PARD6G), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11260256] [evidence IPI]		
Homo sapiens	RefSeq	NM_006926.1	ILMN_169048	SFTPA2	NM_006926.1	NM_006926.1		6436	13346505	NM_006926.1	SFTPA2	NP_008857.1	ILMN_2205012	0007550524	S	1243	GCCCAGAGCCATCAGGATGAGCAGTACCGGCCAAGCATAATGACAGAGAG	10	-	81306454-81306503	10q22.3f	Homo sapiens surfactant, pulmonary-associated protein A2 (SFTPA2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; Any process that modulates the surface tension of a liquid. Surface tension is the property that makes a liquid behave as if it had an elastic skin on its surface at the interface with a gas or an immiscible liquid [goid 50828] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	COLEC5; SP-A2; SP-2A; SP-A1 beta; SPAII; SP-2A beta; SP-A1	SP-A1 beta; SP-2A beta; COLEC5; SP-A2; SP-2A; SPAII; SP-A1
Homo sapiens	RefSeq	NR_029873.1	ILMN_388217	MIR381	NR_029873.1	NR_029873.1		494330	262206258	NR_029873.1	MIR381		ILMN_3310523	0005810731	S	9	CGAGGTTGCCCTTTGTATATTCGGTTTATTGACATGGAATATACAAGGGC				14q32.31a	Homo sapiens microRNA 381 (MIR381), microRNA.					
Homo sapiens	RefSeq	NM_000140.2	ILMN_5447	FECH	NM_000140.2	NM_000140.2		2235	60499020	NM_000140.2	FECH	NP_000131.2	ILMN_1774091	0007200315	A	3684	TGATGAGGCAGTTTAGCTTGCCAGGGTGATGATAAAGCCCAGGTCCCTGC	18	-	53366618-53366667	18q21.31b	Homo sapiens ferrochelatase (protoporphyria) (FECH), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 11175906] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]; The series of events in which an ultraviolet radiation (UV light) stimulus is received by a cell and converted into a molecular signal. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9589] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 1729699] [evidence TAS]; The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [pmid 1729699] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [pmid 1376018] [evidence TAS]	Catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+ [goid 4325] [evidence IEA]; Catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+ [goid 4325] [pmid 11175906] [evidence EXP]; Catalysis of the reaction: protoporphyrin + Fe2+ = protoheme + 2 H+ [goid 4325] [pmid 2260980] [evidence TAS]; Interacting selectively with ferrous iron, Fe(II) [goid 8198] [pmid 1729699] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	FCE; EPP	FCE; EPP
Homo sapiens	Unigene	Hs.539161	ILMN_104345	HS.539161	Hs.539161		Hs.539161		1544141	AA052941			ILMN_1871883	0004560553	S	36	CCAATTGACTATGGGATAGGAAAGAAAGTGAGGTGTCAAGGATAAAGCCA	12	+	119877855-119877904		zl70b11.s1 Stratagene colon (#937204) Homo sapiens cDNA clone IMAGE:509949 3, mRNA sequence					
Homo sapiens	RefSeq	NM_012449.2	ILMN_162269	MGC87042	XM_001128032.1	XM_001128032.1		256227	113418406	XM_001128032.1	MGC87042	XP_001128032.1	ILMN_1663575	0006370364	A	728	CTGGCTCTGTTGGCTGTGACATCTATTCCATCTGTGAGTGACTCTTTGAC	7	-	22498733-22498782	7p15.3c	PREDICTED: Homo sapiens similar to Six transmembrane epithelial antigen of prostate (MGC87042), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				MGC19484; PRSS24; STEAP
Homo sapiens	RefSeq	NM_012479.2	ILMN_15635	YWHAG	NM_012479.2	NM_012479.2		7532	21464100	NM_012479.2	YWHAG	NP_036611.2	ILMN_1750145	0006280040	S	3032	CCTGAGGGCTGAAAACGGAGAGGGAATGGGAGACTTGATATTTAAGCAGC	7	-	75794683-75794732	7q11.23e-q11.23f	Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide (YWHAG), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [pmid 10433554] [evidence NAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 10486217] [evidence NAS]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 10433554] [evidence NAS]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [pmid 11824616] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [pmid 11824616] [evidence IMP]	Interacting selectively with protein kinase C [goid 5080] [pmid 10433554] [evidence IPI]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [pmid 12482592] [evidence IPI]; Stops, prevents or reduces the activity of protein kinase C, an enzyme which phosphorylates a protein [goid 8426] [pmid 10433554] [evidence NAS]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]	14-3-3GAMMA	14-3-3GAMMA
Homo sapiens	RefSeq	NM_194312.1	ILMN_15609	ESPNL	NM_194312.1	NM_194312.1		339768	34916041	NM_194312.1	ESPNL	NP_919288.1	ILMN_2115862	0000070465	S	4521	GCTCCGGCTTCCTCCACTGCTGAAGACCCTGCTGTAGAGCTGAAGCTGAA	2	+	238706580-238706629	2q37.3b-q37.3c	Homo sapiens espin-like (ESPNL), mRNA.				FLJ42568; MGC99829	FLJ42568; MGC99829
Homo sapiens	RefSeq	NM_004808.2	ILMN_168721	NMT2	NM_004808.2	NM_004808.2		9397	109452600	NM_004808.2	NMT2	NP_004799.1	ILMN_2062620	0005860066	S	4781	CTGCAGCATTGCCAGTTGGAAACTTTGTCATGAGCTTACCTCACGGTGAC	10	-	15188144-15188193	10p13c	Homo sapiens N-myristoyltransferase 2 (NMT2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The covalent or non-covalent attachment of a myristoyl moiety to the N-terminal amino acid residue of a protein [goid 6499] [evidence IEA]; The addition of a lipoyl group to an amino acid residue in a protein [goid 9249] [pmid 9506952] [evidence TAS]; The covalent or non-covalent attachment of a myristoyl moiety to the N-terminal amino acid residue of a protein [goid 6499] [evidence IEA]; The covalent or non-covalent attachment of a myristoyl moiety to the N-terminal amino acid residue of a protein [goid 6499] [evidence IEA]	Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide [goid 4379] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide [goid 4379] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: tetradecanoyl-CoA + glycyl-peptide = CoA + N-tetradecanoylglycyl-peptide [goid 4379] [evidence IEA]		
Homo sapiens	RefSeq	XM_001133707.1	ILMN_163414	LOC732441	XM_001133707.1	XM_001133707.1		732441	113430911	XM_001133707.1	LOC732441	XP_001133707.1	ILMN_3235345	0005860338	S	3	GAGTTTCCTTTGGCTTCAAACTGCTCTACATTTGGCCTGTGCCAGTGGCC					PREDICTED: Homo sapiens hypothetical LOC732441 (LOC732441), mRNA.					
Homo sapiens	RefSeq	NR_003934.1	ILMN_352916	LOC729156	NR_003934.1	NR_003934.1		729156	157671954	NR_003934.1	LOC729156		ILMN_3247217	0001940463	S	697	ACGTGATCCAGCCCCTGCGGAAGCAGGTGGAGCTGCTCTTCAACAGATGA	7	-	66290286-66290335	7q11.21e	Homo sapiens GTF2I repeat domain containing 1-like (LOC729156), non-coding RNA.					
Homo sapiens	RefSeq	NM_024109.1	ILMN_12265	C16ORF68	NM_024109.2	NM_024109.2		79091	94536785	NM_024109.2	C16orf68	NP_077014.2	ILMN_1658290	0000650626	S	1217	TTAAAACGCTCTCCCGACTCGCCCACAGATTGAAAAATGCCTGCACAGCC	16	+	8643854-8643903	16p13.2b	Homo sapiens chromosome 16 open reading frame 68 (C16orf68), mRNA.				FLJ12433; MGC2654	FLJ12433
Homo sapiens	RefSeq	XM_928211.1	ILMN_31708	LOC653580	XM_928211.1	XM_928211.1		653580	89060261	XM_928211.1	LOC653580	XP_933304.1	ILMN_1741729	0001510341	S	493	CACCCCTCGCCCGCAAGCCCAGGGAGTGGTCAGCAGTGGGGCTTTGTGAT	X	+	140505329-140505378		PREDICTED: Homo sapiens similar to sperm protein associated with the nucleus, X chromosome, family member A1 (LOC653580), mRNA.					
Homo sapiens	RefSeq	NM_001012271.1	ILMN_20327	BIRC5	NM_001012271.1	NM_001012271.1		332	59859881	NM_001012271.1	BIRC5	NP_001012271.1	ILMN_1803124	0007550626	A	2503	TGAGGCTTCTGGGCTATGGGTGAGGTTCCAATGGCAGGTTAGAGCCCCTC	17	+	73733114-73733163	17q25.3b	Homo sapiens baculoviral IAP repeat-containing 5 (BIRC5), transcript variant 3, mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [pmid 16291752] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISS]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [pmid 11516652] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9256286] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16291752] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [pmid 9859993] [evidence IDA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12773388] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [pmid 11069302] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISS]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [pmid 9859993] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISS]; Any microtubule in the cytoplasm of a cell [goid 5881] [pmid 9859993] [evidence IDA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence ISS]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 9859993] [evidence IDA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 11069302] [evidence IDA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence ISS]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 16291752] [evidence IDA]; A microtubule organizing center found in interphase cells, which organize a longitudinal array of three to five MT bundles from the nuclear envelope during interphase. Each MT bundle is composed of two to seven MTs arranged in an antiparallel configuration, with the dynamic MT plus ends extending toward the cell tips and stable minus ends near the nucleus [goid 31021] [pmid 9859993] [evidence IDA]; A microtubule organizing center found in interphase cells, which organize a longitudinal array of three to five MT bundles from the nuclear envelope during interphase. Each MT bundle is composed of two to seven MTs arranged in an antiparallel configuration, with the dynamic MT plus ends extending toward the cell tips and stable minus ends near the nucleus [goid 31021] [evidence ISS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16291752] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16291752] [evidence IMP]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16239925] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence ISS]	Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 9859993] [evidence IDA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence ISS]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 12805209] [evidence IMP]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10626797] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9256286] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9859993] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12773388] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10626797] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 16291752] [evidence TAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence ISS]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [pmid 16239925] [evidence IMP]; Any process that activates or increases the rate of progression from anaphase/telophase (high mitotic CDK activity) to G1 (low mitotic CDK activity) [goid 31536] [pmid 12805209] [evidence IMP]; Any process that activates or increases the rate of progression from anaphase/telophase (high mitotic CDK activity) to G1 (low mitotic CDK activity) [goid 31536] [evidence ISS]; A cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle [goid 31577] [pmid 12805209] [evidence IMP]; A cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle [goid 31577] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 9859993] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 12773388] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [pmid 16291752] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence ISS]; The directed movement of a chromosome to a specific location [goid 51303] [pmid 12805209] [evidence IMP]; The directed movement of a chromosome to a specific location [goid 51303] [evidence ISS]	 [goid 4869] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12773388] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15628841] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291752] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11069302] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11516652] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11069302] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291752] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14610074] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291752] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 9859993] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10949039] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10876248] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16291752] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10949039] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10876248] [evidence IDA]; Stops, prevents or reduces the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43027] [pmid 9859993] [evidence IMP]; Stops, prevents or reduces the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43027] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16291752] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISS]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [pmid 12773388] [evidence IDA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence ISS]; Interacting selectively with a cobalt (Co) ion [goid 50897] [pmid 10949039] [evidence NAS]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 18086682] [evidence IPI]	API4; EPR-1	API4; EPR-1
Homo sapiens	RefSeq	NM_152742.1	ILMN_6771	GPC2	NM_152742.1	NM_152742.1		221914	22749458	NM_152742.1	GPC2	NP_689955.1	ILMN_1651642	0003390328	S	2321	CAGGGGACTGAGGGTGCTTGAGTAGGATGTGAGACTTCATGGGCCTGGGT	7	-	99767390-99767439	7q22.1c	Homo sapiens glypican 2 (GPC2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			FLJ38962; DKFZp547M109	FLJ38962; DKFZp547M109
Homo sapiens	RefSeq	NM_144598.2	ILMN_26157	LRRC28	NM_144598.2	NM_144598.2		123355	33285014	NM_144598.2	LRRC28	NP_653199.2	ILMN_1794968	0003140537	S	1285	CTGCCAGCTTGACACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATC	15	+	97743856-97743905	15q26.3b	Homo sapiens leucine rich repeat containing 28 (LRRC28), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC24976; FLJ45242; FLJ34269	MGC24976; FLJ45242; FLJ34269
Homo sapiens	RefSeq	XR_037750.1	ILMN_348372	LOC100130869	XR_037750.1	XR_037750.1		100130869	169167612	XR_037750.1	LOC100130869		ILMN_3268492	0000610088	M	759	CCGCCAGTTGGGCTCTGCTAGAAACTTTTAGTCCTCCCTTAACGGCTATC	5	+	42987722-42987771	5p12c	PREDICTED: Homo sapiens misc_RNA (LOC100130869), miscRNA.					
Homo sapiens	RefSeq	XM_001130444.1	ILMN_178830	LOC728393	XM_001130444.1	XM_001130444.1		728393	113415483	XM_001130444.1	LOC728393	XP_001130444.1	ILMN_3237089	0000620468	S	1435	CATCCTGAACAGCAAAGCTCCCTGCTAAACCTCTCTTCGTCGACCCCGAC	4	+	8956406-8956455	4p16.1c	PREDICTED: Homo sapiens similar to deubiquitinating enzyme 1 (LOC728393), mRNA.					
Homo sapiens	RefSeq	NM_002285.2	ILMN_26121	AFF3	NM_001025108.1	NM_001025108.1		3899	68348715	NM_001025108.1	AFF3	NP_001020279.1	ILMN_1775235	0000650753	A	7943	GTAGATTCCCAAGAGACTTTAGCAGTCACCAGCCTTAATGCATGTACAGG	2	-	100163843-100163892	2q11.2c-q11.2d	Homo sapiens AF4/FMR2 family, member 3 (AFF3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8555498] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8555498] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MLLT2-like; LAF4	MLLT2-like; LAF4
Homo sapiens	RefSeq	NM_001025108.1	ILMN_26121	AFF3	NM_001025108.1	NM_001025108.1		3899	68348715	NM_001025108.1	AFF3	NP_001020279.1	ILMN_1677951	0002230273	I	221	GGAATGACTCTCTAGTTGTGGAATTTCAGTCATCAGCCAGCAGATGCAGG	2	-	100627960-100628009	2q11.2c-q11.2d	Homo sapiens AF4/FMR2 family, member 3 (AFF3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8555498] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8555498] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MLLT2-like; LAF4	MLLT2-like; LAF4
Homo sapiens	RefSeq	NM_001005786.1	ILMN_5642	DAZ2	NM_001005786.1	NM_001005786.1		57055	54292106	NM_001005786.1	DAZ2	NP_001005786.1	ILMN_3250196	0002760075	A	1073	CCTGCTTATCCAAGTTCACCATTTCAGGTCACCACTGGATATCAGTTGCC	Y	+	23830799-23830848	Yq11.223d	Homo sapiens deleted in azoospermia 2 (DAZ2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [pmid 8896558] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7670487] [evidence TAS]	MGC126442; pDP1678	MGC126442; pDP1678
Homo sapiens	RefSeq	NM_004089.3	ILMN_9893	TSC22D3	NM_004089.3	NM_004089.3		1831	62865622	NM_004089.3	TSC22D3	NP_004080.2	ILMN_2276952	0000770494	I	227	CAGAGCTTCCTAGCAGCCCGAGCCATGAACACCGAAATGTATCAGACCCC	X	-	106960015-106960041:106960042-106960064	Xq22.3b	Homo sapiens TSC22 domain family, member 3 (TSC22D3), transcript variant 2, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8982256] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8982256] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	hDIP; DIP; DKFZp313A1123; DSIPI; TSC-22R; GILZ	hDIP; DIP; DKFZp313A1123; DSIPI; TSC-22R; GILZ
Homo sapiens	RefSeq	NM_004089.3	ILMN_9893	TSC22D3	NM_004089.3	NM_004089.3		1831	62865622	NM_004089.3	TSC22D3	NP_004080.2	ILMN_2376403	0006350446	A	1372	AGGGCCTAACCAGCCTTGGGAGTATTGACTGGTCCCTTACCTCTTATGGC	X	-	106956982-106957031	Xq22.3b	Homo sapiens TSC22 domain family, member 3 (TSC22D3), transcript variant 2, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8982256] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8982256] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	hDIP; DIP; DKFZp313A1123; DSIPI; TSC-22R; GILZ	hDIP; DIP; DKFZp313A1123; DSIPI; TSC-22R; GILZ
Homo sapiens	RefSeq	NM_001098800.1	ILMN_307498	MAGED4	NM_001098800.1	NM_001098800.1		728239	149274613	NM_001098800.1	MAGED4	NP_001092270.1	ILMN_3245611	0001090762	S	61	TGAGGGAAGCTTCAGCGTGCAATCGGAAAGCTACAGTGTTGAAGACATGG	X	+	51929024-51929073	Xp11.22b	Homo sapiens melanoma antigen family D, 4 (MAGED4), mRNA.				FLJ39060; MAGE1; MAGE-E1; KIAA1859; MGC3210	FLJ39060; MAGE1; MAGE-E1; KIAA1859; MGC3210
Homo sapiens	Unigene	Hs.563805	ILMN_116589	HS.563805	Hs.563805		Hs.563805		6991141	AW450365			ILMN_1883589	0007320050	S	159	CTCTTCCCCTCCTGAGAGAGTCAAAGGGTGGCATCAGGGACCCATAATCC	1	-	166811906-166811955		UI-H-BI3-akn-d-04-0-UI.s1 NCI_CGAP_Sub5 Homo sapiens cDNA clone IMAGE:2734879 3, mRNA sequence					
Homo sapiens	RefSeq	NM_138342.2	ILMN_29636	GLB1L2	NM_138342.2	NM_138342.2		89944	31543092	NM_138342.2	GLB1L2	NP_612351.2	ILMN_2144401	0003940014	S	2696	CCTGCGTCTTCCCAAGTTAGCAGGTGTCTCTGGTGTTCAGTGAGGAGGAC	11	+	133750797-133750846	11q25e	Homo sapiens galactosidase, beta 1-like 2 (GLB1L2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	MST114; MSTP114	MST114; MSTP114
Homo sapiens	RefSeq	XM_943768.1	ILMN_32928	LOC649557	XM_943768.1	XM_943768.1		649557	89038946	XM_943768.1	LOC649557	XP_948861.1	ILMN_1671125	0000730598	S	10	AGAGGACAGTCCAAACTCAGCTTCTCAGGGATGCTGTCCTTGCAGGCCGC					PREDICTED: Homo sapiens hypothetical protein LOC649557 (LOC649557), mRNA.					
Homo sapiens	Unigene	Hs.545298	ILMN_108538	HS.545298	Hs.545298		Hs.545298		31452357	CD520639			ILMN_1826771	0003850369	S	146	TCTGGACAATCTCAAGCAAGGCATCACCCTTCAAGAAGCCTGTCTTCTGC	8	+	102518215-102518264		AGENCOURT_14357881 NIH_MGC_191 Homo sapiens cDNA clone IMAGE:30409612 5, mRNA sequence					
Homo sapiens	RefSeq	XM_929907.1	ILMN_38014	CRIM2	XM_929907.1	XM_929907.1		375616	89025480	XM_929907.1	CRIM2	XP_935000.1	ILMN_1747850	0003170356	S	4744	CCACACTGACCACCCCCGTGGGCTCTGAGTTTACCTTTCCTCAGCTAGAA	7	-	128301421-128301470	7q32.1a	PREDICTED: Homo sapiens cysteine rich BMP regulator 2 (chordin-like) (CRIM2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_001009.3	ILMN_8460	RPS5	NM_001009.3	NM_001009.3		6193	71164878	NM_001009.3	RPS5	NP_001000.2	ILMN_1707810	0000620754	S	348	CGTCAAGCATGCCTTCGAGATCATACACCTGCTCACAGGCGAGAACCCTC	19	+	58904510-58904552:58904726-58904732	19q13.43c	Homo sapiens ribosomal protein S5 (RPS5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 8706699] [evidence IDA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [pmid 15883184] [evidence IC ]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 18464793] [evidence IDA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]		
Homo sapiens	RefSeq	NM_014809.2	ILMN_19660	KIAA0319	NM_014809.3	NM_014809.3		9856	134304839	NM_014809.3	KIAA0319	NP_055624.2	ILMN_1657497	0004920112	S	6663	CAGCCTGTGTGTGCACGCCCCATGAGCCGAAAAGTGGGTCTTATGTTTTC	6	-	24652403-24652452	6p22.2b	Homo sapiens KIAA0319 (KIAA0319), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DLX2; DYLX2; MGC176717; DYX2	DLX2; DYLX2; DYX2
Homo sapiens	RefSeq	XM_943736.1	ILMN_34136	LOC649493	XM_943736.1	XM_943736.1		649493	89059229	XM_943736.1	LOC649493	XP_948829.1	ILMN_1671970	0005050747	S	253	AGGGTTCCTTTCCCGCCGCCCCGAGACCAGTTCCCCGGCGCGGGGTCCGA					PREDICTED: Homo sapiens hypothetical protein LOC649493 (LOC649493), mRNA.					
Homo sapiens	RefSeq	NM_145305.1	ILMN_1479	SLC25A43	NM_145305.1	NM_145305.1		203427	21687150	NM_145305.1	SLC25A43	NP_660348.1	ILMN_2142284	0001850021	S	2340	ATCCCCCCAAAGACCTTCTGATTGAAGTCATGTACAGTTCAGTGGCCTAA	X	+	118472026-118472075	Xq24c	Homo sapiens solute carrier family 25, member 43 (SLC25A43), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_145305.1	ILMN_1479	SLC25A43	NM_145305.1	NM_145305.1		203427	21687150	NM_145305.1	SLC25A43	NP_660348.1	ILMN_1662097	0003130746	S	2090	CGCTAGGATTAGAGGTGTGAGCCGCTGCACCCTGCCCCAGTACAATCTTT	X	+	118471776-118471825	Xq24c	Homo sapiens solute carrier family 25, member 43 (SLC25A43), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XR_042393.1	ILMN_334312	LOC100130190	XR_042393.1	XR_042393.1		100130190	169217273	XR_042393.1	LOC100130190		ILMN_3230403	0000450402	I	2752	CAAGGGGCATGGATTTACATTGCAAAAGTTGTCCACACTGTATTAGCAAC				Xq26.3c	PREDICTED: Homo sapiens misc_RNA (LOC100130190), miscRNA.					
Homo sapiens	RefSeq	NM_004064.2	ILMN_175665	CDKN1B	NM_004064.2	NM_004064.2		1027	17978497	NM_004064.2	CDKN1B	NP_004055.1	ILMN_2196347	0001030348	S	2210	ACAAGCCAAAGTGGCATGTTTTGTGCATTTGTAAATGCTGTGTTGGGTAG	12	+	12766376-12766425	12p13.1b	Homo sapiens cyclin-dependent kinase inhibitor 1B (p27, Kip1) (CDKN1B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12093740] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12093740] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12244303] [evidence EXP]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 8033212] [evidence TAS]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 10208428] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10208428] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 12093740] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8033212] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 10208428] [evidence IDA]; Destruction of a cell by its own lysosomal contents. This type of programmed cell death is seen when entire tissues, or parts thereof, are committed to destruction, and occurs by the formation of multiple acidic autophagic vacuoles within the doomed cells [goid 48102] [pmid 12698196] [evidence IDA]	Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 10918569] [evidence TAS]; Activity of any of the molecules that transmit the signal from a TGF-beta receptor through the cytoplasm to the nucleus [goid 5072] [pmid 8033212] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9840943] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254966] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9106657] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254967] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254966] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12082530] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15057270] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15652749] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15890360] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254966] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254967] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8756624] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12082530] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254966] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15057270] [evidence IPI]	P27KIP1; KIP1; MEN1B; MEN4; CDKN4	P27KIP1; KIP1; MEN1B; MEN4; CDKN4
Homo sapiens	RefSeq	NM_004064.2	ILMN_175665	CDKN1B	NM_004064.2	NM_004064.2		1027	17978497	NM_004064.2	CDKN1B	NP_004055.1	ILMN_1722811	0000130309	S	1679	GCAACAGAAACCTATCCTCACTGCCCTCCCCAGTCTCTCTTAAAGTTGGA	12	+	12765845-12765894	12p13.1b	Homo sapiens cyclin-dependent kinase inhibitor 1B (p27, Kip1) (CDKN1B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12093740] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12093740] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12244303] [evidence EXP]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 8033212] [evidence TAS]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 10208428] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10208428] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 12093740] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8033212] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 10208428] [evidence IDA]; Destruction of a cell by its own lysosomal contents. This type of programmed cell death is seen when entire tissues, or parts thereof, are committed to destruction, and occurs by the formation of multiple acidic autophagic vacuoles within the doomed cells [goid 48102] [pmid 12698196] [evidence IDA]	Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 10918569] [evidence TAS]; Activity of any of the molecules that transmit the signal from a TGF-beta receptor through the cytoplasm to the nucleus [goid 5072] [pmid 8033212] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9840943] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254966] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9106657] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254967] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254966] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12082530] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15057270] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15652749] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15890360] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254966] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254967] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8756624] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12082530] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254966] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15057270] [evidence IPI]	P27KIP1; KIP1; MEN1B; MEN4; CDKN4	P27KIP1; KIP1; MEN1B; MEN4; CDKN4
Homo sapiens	RefSeq	XM_499190.2	ILMN_41512	LOC441546	XM_943303.1	XM_943303.1		441546	89031746	XM_943303.1	LOC441546	XP_948396.1	ILMN_1699059	0006400100	A	28	ATGGCCCAGCCCGCCACGCTCACCTTTTCCCACCACCTGGAGGATCCACT				10p15.2b	PREDICTED: Homo sapiens hypothetical LOC441546 (LOC441546), mRNA.					
Homo sapiens	RefSeq	NM_001043.2	ILMN_162679	SLC6A2	NM_001043.2	NM_001043.2		6530	65506986	NM_001043.2	SLC6A2	NP_001034.1	ILMN_1765607	0000650176	S	3006	GGAGGGCAGGGTGAGACAAGCAGCCCAGAAATACTCTCTCAAGTGGAGGG	16	+	54294860-54294909	16q12.2c	Homo sapiens solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 (SLC6A2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2008212] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2008212] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 2008212] [evidence TAS]; The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of, within or between cells [goid 15844] [pmid 16024787] [evidence IDA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: norepinephrine(out) + Na+(out) = norepinephrine(in) + Na+(in) [goid 5334] [pmid 2008212] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11343649] [evidence IPI]; Catalysis of the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other [goid 8504] [pmid 16024787] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	NAT1; NET; SLC6A5; NET1	NAT1; NET; SLC6A5; NET1
Homo sapiens	RefSeq	XM_927354.1	ILMN_31058	LOC644144	XM_927354.1	XM_927354.1		644144	89041582	XM_927354.1	LOC644144	XP_932447.1	ILMN_1759636	0000460091	S	3202	TAGTTCAGTCATCCTTGCTATCTTGCGGGGGATTGGTTCTAGGATACCGC	17	+	40943604-40943653		PREDICTED: Homo sapiens similar to ADP-ribosylation factor 7 (LOC644144), mRNA.					
Homo sapiens	RefSeq	NM_015692.1	ILMN_181794	CPAMD8	NM_015692.2	NM_015692.2		27151	118600976	NM_015692.2	CPAMD8	NP_056507.2	ILMN_1726250	0004900551	S	5769	CCAGCCTTTCAGAGTGGTGGGGAGGAGGGTTTATGGATGTCAAACACCTG	19	-	17003931-17003980	19p13.11e	Homo sapiens C3 and PZP-like, alpha-2-macroglobulin domain containing 8 (CPAMD8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	KIAA1283; K-CAP; FLJ90618; VIP; FLJ42058	KIAA1283; K-CAP; FLJ90618; VIP
Homo sapiens	RefSeq	NM_173511.2	ILMN_29052	FAM117B	NM_173511.2	NM_173511.2		150864	67190501	NM_173511.2	FAM117B	NP_775782.1	ILMN_3244607	0003140632	S	4714	CCGGTTTTGCCTCTTTGGTTACATGTGGTGAGCATGGATGTCAAGATTAT	2	+	203341976-203342025	2q33.1g	Homo sapiens family with sequence similarity 117, member B (FAM117B), mRNA.				FLJ38771; DKFZp686H01244; FAM117B	FLJ38771; DKFZp686H01244; FAM117B
Homo sapiens	RefSeq	NM_173511.2	ILMN_29052	FAM117B	NM_173511.2	NM_173511.2		150864	67190501	NM_173511.2	FAM117B	NP_775782.1	ILMN_1739942	0003120292	S	5366	GTTACGCTGTACTTATGTATTCCCTGTACCTGAACACTTGTTGCTGCCTC	2	+	203342628-203342677	2q33.1g	Homo sapiens family with sequence similarity 117, member B (FAM117B), mRNA.				FLJ38771; DKFZp686H01244; FAM117B	FLJ38771; DKFZp686H01244; FAM117B
Homo sapiens	RefSeq	NM_004355.2	ILMN_21746	CD74	NM_004355.2	NM_004355.2		972	68448524	NM_004355.2	CD74	NP_004346.1	ILMN_2379644	0007040008	A	1038	AAGGCACAGGGAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACAT	5	-	149781425-149781474	5q33.1c	Homo sapiens CD74 molecule, major histocompatibility complex, class II invariant chain (CD74), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 12782713] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 6324166] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [pmid 12782713] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence ISS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence ISS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 12782713] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 12782713] [evidence IDA]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence ISS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) of endogenous origin on its cell surface in association with an MHC protein complex [goid 19883] [pmid 10981873] [evidence NAS]; Any process that modulates the frequency or rate of macrophage activation [goid 43030] [pmid 12782713] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 12782713] [evidence IDA]; The process by which T cells that express T cell receptors that are restricted by self MHC protein complexes and tolerant to self antigens are selected for further maturation [goid 45058] [pmid 10981873] [evidence NAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [pmid 12782713] [evidence IPI]; Interacting selectively with major histocompatibility complex class II molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42289] [pmid 10981873] [evidence NAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 12782713] [evidence TAS]; Interacting selectively with major histocompatibility complex class II molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42289] [evidence IEA]	Ia-GAMMA; DHLAG; HLADG; protein 41	Ia-GAMMA; DHLAG; HLADG; protein 41
Homo sapiens	RefSeq	NM_001905.1	ILMN_18906	CTPS	NM_001905.1	NM_001905.1		1503	4503132	NM_001905.1	CTPS	NP_001896.1	ILMN_1783285	0006370273	S	2466	TCCCCATGCCTGTGCGTGCGCTTCCTATTTCTAGGGCTGGGAAACACTCC	1	+	41250525-41250574	1p34.2c	Homo sapiens CTP synthase (CTPS), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16179339] [evidence EXP]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 2113467] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [pmid 16179339] [evidence IDA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 7981751] [evidence TAS]	Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [pmid 16179339] [evidence IGI]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [pmid 16179339] [evidence EXP]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [pmid 16179339] [evidence IGI]; Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP [goid 3883] [pmid 16179339] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Homo sapiens	RefSeq	NM_001071.1	ILMN_26899	TYMS	NM_001071.1	NM_001071.1		7298	4507750	NM_001071.1	TYMS	NP_001062.1	ILMN_1806040	0005910364	S	1070	GGATATTGTCAGTCTTTAGGGGTTGGGCTGGATGCCGAGGTAAAAGTTCT	18	+	663033-663082	18p11.32c	Homo sapiens thymidylate synthetase (TYMS), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2656695] [evidence EXP]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 2987839] [evidence TAS]; The chemical reactions and pathways resulting in the formation of dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) [goid 6231] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 15504738] [evidence NAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 15504738] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a deoxyribonucleoside monophosphate, a glycosamine consisting of a base linked to a deoxyribose sugar esterified with phosphate on its glycose moiety [goid 9157] [pmid 2987839] [evidence TAS]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; The chemical reactions and pathways resulting in the formation of dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) [goid 6231] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate) [goid 6231] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]	Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP [goid 4799] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP [goid 4799] [pmid 2656695] [evidence EXP]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP [goid 4799] [evidence IEA]; Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dUMP = dihydrofolate + dTMP [goid 4799] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TS; TSase; TMS; HsT422; MGC88736	TS; TSase; TMS; HsT422; MGC88736
Homo sapiens	RefSeq	NM_148980.1	ILMN_33015	NSUN5B	NM_001039575.1	NM_001039575.1		155400	88758569	NM_001039575.1	NSUN5B	NP_001034664.1	ILMN_1722450	0000060544	I	227	CGGGGCGGGGAAGTGAACCCCGACGGTCAGCGCTTTGTCATCTGGTTTCA	7	+	74877953-74878002	7q11.23d	Homo sapiens NOP2/Sun domain family, member 5B (NSUN5B), transcript variant 1, mRNA.				WBSCR20B; MGC129801	WBSCR20B; NOL1R2; DKFZp434K058; MGC129801; MGC15057; FLJ11626; WBSCR20C
Homo sapiens	RefSeq	NM_015144.1	ILMN_32176	ZCCHC14	NM_015144.2	NM_015144.2		23174	88900496	NM_015144.2	ZCCHC14	NP_055959.1	ILMN_1743456	0002710402	S	6497	CATCCGCCGCGGCCTCACGTGCGTTGTAACAAGCCCTCATCACATGTGTG	16	-	87440216-87440265	16q24.2a	Homo sapiens zinc finger, CCHC domain containing 14 (ZCCHC14), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126527; BDG29; BDG-29; MGC14139	BDG29; BDG-29; MGC14139
Homo sapiens	RefSeq	XM_001724554.1	ILMN_344881	LOC100134331	XM_001724554.1	XM_001724554.1		100134331	169207529	XM_001724554.1	LOC100134331	XP_001724606.1	ILMN_3243573	0002490132	S	221	GGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTAC					PREDICTED: Homo sapiens similar to hCG1812074 (LOC100134331), mRNA.					
Homo sapiens	RefSeq	XM_941681.1	ILMN_162421	LOC391157	XR_016197.1	XR_016197.1		391157	113411635	XR_016197.1	LOC391157		ILMN_1802963	0006550594	A	118	GAGGAGAAGTTCAACTCCCTCAACGAGCTGGTCGACTTCTACCGCACCAC	1	+	207413052-207413101	1q32.2b	PREDICTED: Homo sapiens similar to GRB2-related adapter protein (LOC391157), mRNA.					
Homo sapiens	RefSeq	NM_003044.2	ILMN_28148	SLC6A12	NM_003044.2	NM_003044.2		6539	19923156	NM_003044.2	SLC6A12	NP_003035.2	ILMN_1780831	0006220332	S	3188	TGTGCTCCAGGCGACACCATTTGCCATCCTGCTTCTAACGCAAACCCCTG	12	-	169645-169694	12p13.33d	Homo sapiens solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12 (SLC6A12), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) = gamma-aminobutyric acid(in) + Na+(in) [goid 5332] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	BGT-1; BGT1; FLJ38727	BGT-1; BGT1; FLJ38727
Homo sapiens	RefSeq	XM_940279.1	ILMN_35105	LOC651150	XM_940279.1	XM_940279.1		651150	89037635	XM_940279.1	LOC651150	XP_945372.1	ILMN_1704611	0001850452	S	175	CCTCAGAGTGCAGGGCCGCAGAGCCCGAGCCCACCCGGAACTTGCGTTAT					PREDICTED: Homo sapiens similar to T-box 1 isoform C (LOC651150), mRNA.					
Homo sapiens	RefSeq	NM_004610.2	ILMN_2101	TCP10	NM_004610.2	NM_004610.2		6953	74271878	NM_004610.2	TCP10	NP_004601.2	ILMN_1684417	0005860026	S	1848	TTATCGTGGCCTCTCGCAGCCCGGGGAGCACGTCGCCTCTTGAAACTCGA	6	-	167690996-167691045	6q27d	Homo sapiens t-complex 10 (mouse) (TCP10), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8111376] [evidence TAS]			MGC34049	MGC34049
Homo sapiens	RefSeq	XM_001716781.1	ILMN_348026	LOC100131941	XM_001716781.1	XM_001716781.1		100131941	169205939	XM_001716781.1	LOC100131941	XP_001716833.1	ILMN_3290743	0006110164	M	670	GGAGAGAAAACAACGCACCTGCGTGCCACACGATGAGCACCGTTAGCTTC	13	-	49092453-49092467:49092468-49092502	13q14.3a	PREDICTED: Homo sapiens hypothetical protein LOC100131941 (LOC100131941), mRNA.					
Homo sapiens	RefSeq	NM_022579.1	ILMN_7676	CSHL1	NM_022579.1	NM_022579.1		1444	12545375	NM_022579.1	CSHL1	NP_072101.1	ILMN_1703545	0004810441	A	522	ATGCTGATGGGGAGGCTGGAAGACGGCAGCCACCTGACTGGGCAGACCCT	17	-	61987230-61987268:61987522-61987532	17q23.3b	Homo sapiens chorionic somatomammotropin hormone-like 1 (CSHL1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 2744760] [evidence NAS]	hCS-L; CS-5; CSL; CSHP1; MGC149868	hCS-L; CS-5; MGC149868; CSL; CSHP1
Homo sapiens	RefSeq	NM_022641.2	ILMN_7676	CSHL1	NM_022579.1	NM_022579.1		1444	12545375	NM_022579.1	CSHL1	NP_072101.1	ILMN_1680436	0001690102	A	72	GGCTCCCGGACGTCCCTGCTCCTGGCTTTTGCCCTGCTCTGCCTGCCCTG	17	-	61988235-61988284	17q23.3b	Homo sapiens chorionic somatomammotropin hormone-like 1 (CSHL1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 2744760] [evidence NAS]	hCS-L; CS-5; CSL; CSHP1; MGC149868	CSMT; CSA; PL
Homo sapiens	RefSeq	NM_198836.1	ILMN_9534	ACACA	NM_198836.1	NM_198836.1		31	38679966	NM_198836.1	ACACA	NP_942133.1	ILMN_2331636	0002190414	A	9390	TTGACCAAGACCTGCTTGGACGGAGACCGCCATATTATCTGTTCTCTTCG	17	-	35442043-35442092	17q12b	Homo sapiens acetyl-Coenzyme A carboxylase alpha (ACACA), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [pmid 7905825] [evidence TAS]; Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA [goid 3989] [evidence IEA]; Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein [goid 4075] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16326698] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ACC; ACC1; ACAC; ACCA	ACC; ACC1; ACAC; ACCA
Homo sapiens	RefSeq	NM_002346.1	ILMN_18673	LY6E	NM_002346.1	NM_002346.1		4061	4505048	NM_002346.1	LY6E	NP_002337.1	ILMN_1695404	0004890270	S	836	CAGGGAGACCGTGTCAGTAGGGATGTGTGCCTGGCTGTGTACGTGGGTGT	8	+	144174885-144174934	8q24.3f	Homo sapiens lymphocyte antigen 6 complex, locus E (LY6E), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8650192] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8650192] [evidence TAS]		TSA-1; RIGE; RIG-E; SCA2; SCA-2	TSA-1; RIGE; RIG-E; SCA2; SCA-2
Homo sapiens	RefSeq	NM_005017.2	ILMN_28083	PCYT1A	NM_005017.2	NM_005017.2		5130	31543384	NM_005017.2	PCYT1A	NP_005008.2	ILMN_1658310	0004120598	S	1386	GGAAAGACAACTGGGGAAAGAAGACCTAGGACTGGGGGAACCCAAACAGC	3	-	197449797-197449846	3q29f	Homo sapiens phosphate cytidylyltransferase 1, choline, alpha (PCYT1A), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7918629] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Cytoplasmic bead-like structures of animal cells, visible by electron microscope. Each granule is a functional unit with the biosynthesis and catabolism of glycogen being catalyzed by enzymes bound to the granule surface [goid 42587] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (non-living) stimulus [goid 9628] [evidence IEA]	Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline [goid 4105] [pmid 7918629] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CT; PCYT1; CTPCT	CT; PCYT1; CTPCT
Homo sapiens	RefSeq	NM_020993.3	ILMN_9787	BCL7A	NM_020993.3	NM_020993.3		605	67190621	NM_020993.3	BCL7A	NP_066273.1	ILMN_1665996	0002140075	I	708	TCGAGGTCTCAGAGGGGCAGCCAGATCGGCCGGGAGCCCATTGGGTTGTC	12	+	120977225-120977274	12q24.31c	Homo sapiens B-cell CLL/lymphoma 7A (BCL7A), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15897551] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BCL7	BCL7
Homo sapiens	RefSeq	NM_007074.2	ILMN_6768	CORO1A	NM_007074.2	NM_007074.2		11151	68161542	NM_007074.2	CORO1A	NP_009005.1	ILMN_1713749	0005390113	S	1272	GATGCTGGGCCCCTCCTCATCTCCCTCAAGGATGGCTACGTACCCCCAAA	16	+	30107267-30107316	16p11.2d	Homo sapiens coronin, actin binding protein, 1A (CORO1A), mRNA.	An invagination of the cell membrane formed by an actin dependent process during phagocytosis. Following internalization it is converted into a phagosome [goid 1891] [pmid 17442961] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17341475] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17341475] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17442961] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17341475] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 17442961] [evidence IDA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [pmid 15800061] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A two-stranded helical polymer of the protein actin [goid 31941] [pmid 15800061] [evidence IDA]; A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis [goid 45335] [pmid 17442961] [evidence IDA]	The process by which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome [goid 1845] [pmid 12132654] [evidence IMP]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 17341475] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 17442961] [evidence IMP]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [pmid 17442961] [evidence IMP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 17341475] [evidence NAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a higher concentration, in a concentration gradient of a specific chemical [goid 50918] [pmid 17442961] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament [goid 51126] [pmid 17442961] [evidence IDA]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9365277] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15601263] [evidence IDA]; Interacting selectively with a phosphoinositide 3-kinase, any enzyme that catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring [goid 43548] [pmid 11094157] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 15601263] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 7758584] [evidence IDA]	MGC117380; TACO; p57; HCORO1; CLABP; FLJ41407; CLIPINA	MGC117380; TACO; p57; HCORO1; CLABP; FLJ41407; CLIPINA
Homo sapiens	RefSeq	XM_939354.1	ILMN_36690	LOC654101	XM_939354.1	XM_939354.1		654101	89066217	XM_939354.1	LOC654101	XP_944447.1	ILMN_1752697	0007380075	S	265	CACAGGGGAGTGCATACCAAGATTTTAGCAGATGCTTTCAGTTTCCACAA					PREDICTED: Homo sapiens similar to tripartite motif-containing 51 (LOC654101), mRNA.					
Homo sapiens	Unigene	Hs.436053	ILMN_91582	HS.436053	Hs.436053		Hs.436053		5362247	AI796784			ILMN_1818856	0004880035	S	437	CGGGCTGCATAACACCAAGGAGAAGAAAAACACTACAAATCTGTGAGAAG	7	+	63962756-63962805		we22c11.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2341844 3, mRNA sequence					
Homo sapiens	RefSeq	NM_206961.1	ILMN_13051	LTK	NM_206961.1	NM_206961.1		4058	46249415	NM_206961.1	LTK	NP_996844.1	ILMN_1679290	0006960326	A	2627	CTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCT	15	-	39583391-39583440	15q15.1c	Homo sapiens leukocyte tyrosine kinase (LTK), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7685902] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7685902] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7685902] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7685902] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7685902] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 7685902] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TYK1	TYK1
Homo sapiens	RefSeq	XM_001713611.1	ILMN_348519	LOC100133600	XM_001713611.1	XM_001713611.1		100133600	169166666	XM_001713611.1	LOC100133600	XP_001713663.1	ILMN_3246424	0000730397	S	15	CTCCTCTTCGCCATTTTCTTCTTTATGAGCCAAGTTCTACCAGCCAGGGG					PREDICTED: Homo sapiens hypothetical protein LOC100133600 (LOC100133600), mRNA.					
Homo sapiens	RefSeq	NM_004254.2	ILMN_15746	SLC22A8	NM_004254.2	NM_004254.2		9376	24497498	NM_004254.2	SLC22A8	NP_004245.2	ILMN_1783756	0002320524	S	1928	TGGCCAGTTCAAAGGTTCAGCCATCCCTGCCCTTGTTCTCCCTGCAACCC	11	-	62760496-62760545	11q12.3b	Homo sapiens solute carrier family 22 (organic anion transporter), member 8 (SLC22A8), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10049739] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10049739] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 15037815] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [pmid 10049739] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA];  [goid 5452] [pmid 15037815] [evidence IDA]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [pmid 10049739] [evidence TAS]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC24086; OAT3	MGC24086; OAT3
Homo sapiens	RefSeq	NR_029623.1	ILMN_388235	MIR210	NR_029623.1	NR_029623.1		406992	262206286	NR_029623.1	MIR210		ILMN_3310171	0007510427	S	43	ACACTGCGCTGCCCCAGACCCACTGTGCGTGTGACAGCGGCTGATCTGTG				11p15.5d	Homo sapiens microRNA 210 (MIR210), microRNA.					
Homo sapiens	RefSeq	NR_002949.1	ILMN_171466	NUDT16P	NR_002949.1	NR_002949.1		152195	91598583	NR_002949.1	NUDT16P		ILMN_3239937	0000870647	S	2126	GTGAATAGTGTTGCAGTGAACATGGGAGTGCAGCTATCTCTCCAGATCCT	3	+	132566570-132566619	3q22.1b	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene (NUDT16P), non-coding RNA.				FLJ20525	FLJ20525
Homo sapiens	RefSeq	NM_016599.2	ILMN_162264	MYOZ2	NM_016599.2	NM_016599.2		51778	19923486	NM_016599.2	MYOZ2	NP_057683.1	ILMN_2041725	0000620056	S	1607	AGGACCAAGGTGTGCCCAGAATTCAAGTTTCACAAATCCCAATGCTGTGC	4	+	120327484-120327533	4q26f	Homo sapiens myozenin 2 (MYOZ2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [pmid 11114196] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11114196] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16076904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10427098] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11842093] [evidence IPI]; Interacting selectively with the enzyme protein phosphatase 2B [goid 30346] [pmid 11114196] [evidence NAS]	CS-1; C4orf5	CS-1; C4orf5
Homo sapiens	RefSeq	NM_153757.1	ILMN_5355	NAP1L5	NM_153757.1	NM_153757.1		266812	24371267	NM_153757.1	NAP1L5	NP_715638.1	ILMN_1773307	0006860400	S	1595	ACTTGAAGAACCAATCCAAGTGTGTGCCCCTACCCCCAGCTCAGAAGTAG	4	-	89836359-89836408	4q22.1b	Homo sapiens nucleosome assembly protein 1-like 5 (NAP1L5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DRLM	DRLM
Homo sapiens	RefSeq	XM_928685.1	ILMN_36895	GRLF1	NM_004491.4	NM_004491.4		2909	150417980	NM_004491.4	GRLF1	NP_004482.4	ILMN_1687362	0007160162	S	5608	GCTGGAAGGTGCCAGGTGCACTTGGGGTTGGGGTTGGTGTGTTGGGTGTT	19	+	47505053-47505102	19q13.32b	Homo sapiens glucocorticoid receptor DNA binding factor 1 (GRLF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1894621] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 1894621] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1894621] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 1894621] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC10745; GRF-1; KIAA1722; p190RhoGAP; P190-A; P190A	
Homo sapiens	RefSeq	NM_024342.1	ILMN_36895	GRLF1	NM_004491.4	NM_004491.4		2909	150417980	NM_004491.4	GRLF1	NP_004482.4	ILMN_1658145	0006280064	I	4605	GGCTCTCCCCATTACCTTCTCAAGACCTCAGTGGGAGCACCAGCCAATGG	19	+	47504050-47504099	19q13.32b	Homo sapiens glucocorticoid receptor DNA binding factor 1 (GRLF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1894621] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 1894621] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1894621] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 1894621] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC10745; GRF-1; KIAA1722; p190RhoGAP; P190-A; P190A	p190RhoGAP; MGC10745; GRF-1; KIAA1722; P190-A; P190A
Homo sapiens	RefSeq	NM_004491.2	ILMN_36895	GRLF1	NM_004491.4	NM_004491.4		2909	150417980	NM_004491.4	GRLF1	NP_004482.4	ILMN_1696845	0002260128	A	4356	CTCTGCCGTGGCTTCCACCGTCCCCTTCCTCACTTCCACGCCTGTCACAA	19	+	47503801-47503850	19q13.32b	Homo sapiens glucocorticoid receptor DNA binding factor 1 (GRLF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1894621] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 1894621] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1894621] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 1894621] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC10745; GRF-1; KIAA1722; p190RhoGAP; P190-A; P190A	p190RhoGAP; MGC10745; GRF-1; KIAA1722; P190-A; P190A
Homo sapiens	RefSeq	NM_032989.1	ILMN_27816	BAD	NM_032989.1	NM_032989.1		572	14670387	NM_032989.1	BAD	NP_116784.1	ILMN_1685398	0003520553	I	11	TGCTGGAGGGAGGCGGCAGGCCCGGGTCAGGTGCCTCGAGATCGGGCTTG	11	-	63808680-63808729	11q13.1b	Homo sapiens BCL2-antagonist of cell death (BAD), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence NAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10195903] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9381178] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15183529] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12657644] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10195903] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glucose, the aldohexose gluco-hexose [goid 6007] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 15231831] [evidence EXP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IEA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10949025] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9973195] [evidence IPI]	BBC2; BCL2L8	BBC2; BCL2L8
Homo sapiens	RefSeq	NM_004322.2	ILMN_27816	BAD	NM_032989.1	NM_032989.1		572	14670387	NM_032989.1	BAD	NP_116784.1	ILMN_1738652	0005860376	A	573	AGTGACCTTCGCTCCACATCCCGAAACTCCACCCGTTCCCACTGCCCTGG	11	-	63794211-63794256:63794257-63794260	11q13.1b	Homo sapiens BCL2-antagonist of cell death (BAD), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence NAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10195903] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9381178] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15183529] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12657644] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10195903] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glucose, the aldohexose gluco-hexose [goid 6007] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 15231831] [evidence EXP]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IEA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of T cell differentiation [goid 45582] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10949025] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9973195] [evidence IPI]	BBC2; BCL2L8	BBC2; BCL2L8
Homo sapiens	RefSeq	NM_012479.2	ILMN_172249	YWHAG	NM_012479.2	NM_012479.2		7532	21464100	NM_012479.2	YWHAG	NP_036611.2	ILMN_2228809	0001770433	S	3602	CCAGCTCCGTGTTTCTCTAAGGAATTATTTCACACACGGACCATCTTTAG	7	-	75794113-75794162	7q11.23e-q11.23f	Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide (YWHAG), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [pmid 10433554] [evidence NAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 10486217] [evidence NAS]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 10433554] [evidence NAS]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [pmid 11824616] [evidence IMP]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [pmid 11824616] [evidence IMP]	Interacting selectively with protein kinase C [goid 5080] [pmid 10433554] [evidence IPI]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [pmid 12482592] [evidence IPI]; Stops, prevents or reduces the activity of protein kinase C, an enzyme which phosphorylates a protein [goid 8426] [pmid 10433554] [evidence NAS]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]	14-3-3GAMMA	14-3-3GAMMA
Homo sapiens	RefSeq	NM_004363.1	ILMN_16092	CEACAM5	NM_004363.2	NM_004363.2		1048	98986444	NM_004363.2	CEACAM5	NP_004354.2	ILMN_1670959	0002360632	S	2012	GGGATACCGCAGCAACACACACAAGTTCTCTTTATCGCCAAAATCACGCC	19	+	42224961-42225010	19q13.2c	Homo sapiens carcinoembryonic antigen-related cell adhesion molecule 5 (CEACAM5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3814146] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			CD66e; DKFZp781M2392; CEA	CD66e; DKFZp781M2392; CEA
Homo sapiens	RefSeq	NM_001297.1	ILMN_22319	CNGB1	NM_001297.1	NM_001297.1		1258	4502918	NM_001297.1	CNGB1	NP_001288.1	ILMN_1702383	0007510524	S	4332	GGAGAGCAGACTGGGCAACATAGCGAGACCTCATCTCAAACCGGAATTCG				16q13d	Homo sapiens cyclic nucleotide gated channel beta 1 (CNGB1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which cations ions may pass in response to an intracellular cyclic nucleotide binding to the channel complex or one of its constituent parts [goid 17071] [evidence NAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts [goid 5222] [evidence NAS]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]	RCNC2; CNCG2; CNCG3L; GARP; GAR1; RCNCbeta; RCNCb	RCNC2; CNCG2; CNCG3L; GARP; GAR1; RCNCbeta; RCNCb
Homo sapiens	RefSeq	NR_002204.1	ILMN_16343	FTHL11	NR_002204.1	NR_002204.1		2503	56912195	NR_002204.1	FTHL11		ILMN_1706013	0006180070	S	777	GGGTGCCTTCCTTGGTCACCAAGGCAGTGCGTGCACGTTAGGGTTTCCTT	8	-	82596391-82596440	8q21.13b	Homo sapiens ferritin, heavy polypeptide-like 11 (FTHL11) on chromosome 8.					
Homo sapiens	RefSeq	NR_002204.1	ILMN_16343	FTHL11	NR_002204.1	NR_002204.1		2503	56912195	NR_002204.1	FTHL11		ILMN_2134538	0000460164	S	672	TGGGAGCGCCCGAATCTGGCTCGGCAGAATATCTCTTCGACAAGCACACC	8	-	82596496-82596545	8q21.13b	Homo sapiens ferritin, heavy polypeptide-like 11 (FTHL11) on chromosome 8.					
Homo sapiens	RefSeq	XM_937382.1	ILMN_31447	LOC648329	XM_937382.1	XM_937382.1		648329	89031919	XM_937382.1	LOC648329	XP_942475.1	ILMN_1766120	0006330463	S	3142	CAGAGACACCATGTACCCCCGACCCTCCATGCAGTGCTTTGCTGCTCTAC					PREDICTED: Homo sapiens hypothetical protein LOC648329 (LOC648329), mRNA.					
Homo sapiens	RefSeq	NM_181652.1	ILMN_17596	PRDX5	NM_181652.1	NM_181652.1		25824	32455261	NM_181652.1	PRDX5	NP_857635.1	ILMN_2383975	0002630056	A	367	TCTTTGGGAATCGACGTCTCAAGAGGTTCTCCATGGTGGTACAGGATGGC	11	+	63845092-63845116:63845634-63845658	11q13.1b	Homo sapiens peroxiredoxin 5 (PRDX5), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10521424] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10521424] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10521424] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 10521424] [evidence IDA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	PRDX6; AOEB166; MGC142285; SBBI10; ACR1; MGC142283; B166; PRXV; PLP; MGC117264; PMP20	PRDX6; AOEB166; MGC142285; SBBI10; ACR1; MGC142283; B166; PRXV; PLP; MGC117264; PMP20
Homo sapiens	RefSeq	NM_181652.1	ILMN_17596	PRDX5	NM_181652.1	NM_181652.1		25824	32455261	NM_181652.1	PRDX5	NP_857635.1	ILMN_1711606	0003310564	A	359	GGTGTCCATCTTTGGGAATCGACGTCTCAAGAGGTTCTCCATGGTGGTAC	11	+	63845084-63845116:63845634-63845650	11q13.1b	Homo sapiens peroxiredoxin 5 (PRDX5), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10521424] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10521424] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10521424] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 10521424] [evidence IDA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	PRDX6; AOEB166; MGC142285; SBBI10; ACR1; MGC142283; B166; PRXV; PLP; MGC117264; PMP20	PRDX6; AOEB166; MGC142285; SBBI10; ACR1; MGC142283; B166; PRXV; PLP; MGC117264; PMP20
Homo sapiens	RefSeq	NM_004736.3	ILMN_370899	XPR1	NM_004736.3	NM_004736.3		9213	208609980	NM_004736.3	XPR1	NP_004727.2	ILMN_3250032	0000160441	A	7729	CCCTGATTGCCCTGTAGCAACACCAGCATGGTGGGAATTGGAGGGAAAGA	1	+	180858648-180858697	1q25.3a	Homo sapiens xenotropic and polytropic retrovirus receptor (XPR1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9927670] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9927670] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9990033] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 9990033] [evidence TAS]		
Homo sapiens	RefSeq	NM_001128913.1	ILMN_364878	PCBP2	NM_001128913.1	NM_001128913.1		5094	193083111	NM_001128913.1	PCBP2	NP_001122385.1	ILMN_3249963	0006660309	A	2002	GGCAAGCACTTCCACTAGGGAGGGGGTGGGGGAAAGGAATGACACATGAC	12	+	53873870-53873919	12q13.13e	Homo sapiens poly(rC) binding protein 2 (PCBP2), transcript variant 6, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [pmid 7556077] [evidence NAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7607214] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]		
Homo sapiens	RefSeq	NM_007249.3	ILMN_170772	KLF12	NM_007249.4	NM_007249.4		11278	115392135	NM_007249.4	KLF12	NP_009180.3	ILMN_1714444	0001430711	I	10251	CCAGAGGAGGTCCTACACATTAAAGGATAAAGCCCCCCAGTGATGCTGGC	13	-	74260757-74260806	13q22.1b	Homo sapiens Kruppel-like factor 12 (KLF12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 16615998] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 16615998] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10704285] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AP-2rep; AP2REP; HSPC122	AP-2rep; AP2REP; HSPC122
Homo sapiens	RefSeq	NM_016285.2	ILMN_170772	KLF12	NM_007249.4	NM_007249.4		11278	115392135	NM_007249.4	KLF12	NP_009180.3	ILMN_1762801	0006770017	A	882	CCATGGCAAAGCACAAATGGACCCCCGAGGCCTATCTCCCAGACAAAGTA	13	-	74387385-74387424:74419964-74419973	13q22.1b	Homo sapiens Kruppel-like factor 12 (KLF12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 16615998] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 16615998] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10704285] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	AP-2rep; AP2REP; HSPC122	AP-2rep; AP2REP; HSPC122
Homo sapiens	RefSeq	NM_020854.2	ILMN_19275	KIAA1468	NM_020854.3	NM_020854.3		57614	109948291	NM_020854.3	KIAA1468	NP_065905.2	ILMN_1798346	0005270491	S	3869	GCAGGAAAGAAGCCCCCAGTAAACACTAAGATGGACCTCAAGCCGACTGG	18	+	58123750-58123799	18q21.33a	Homo sapiens KIAA1468 (KIAA1468), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	HsT885; HsT3308; FLJ33841	HsT885; FLJ33841; HsT3308
Homo sapiens	RefSeq	XR_038834.1	ILMN_338256	LOC344593	XR_038834.1	XR_038834.1		344593	169165555	XR_038834.1	LOC344593		ILMN_3279628	0004230209	M	1720	GAGAGTGCCAGAGTCTATGAAAACGTGGGCCTGATGCAACAGCAGAAACA				3q13.12a	PREDICTED: Homo sapiens misc_RNA (LOC344593), miscRNA.					
Homo sapiens	RefSeq	XR_038834.1	ILMN_338256	LOC344593	XR_038834.1	XR_038834.1		344593	169165555	XR_038834.1	LOC344593		ILMN_3203130	0001410041	A	1261	ACCTGGCTGTACCACGGAGTGCCCTGCGACCCCAAAGGCATGCTGCACTT				3q13.12a	PREDICTED: Homo sapiens misc_RNA (LOC344593), miscRNA.					
Homo sapiens	RefSeq	NR_024127.1	ILMN_366733	SNHG12	NR_024127.1	NR_024127.1		85028	198041944	NR_024127.1	SNHG12		ILMN_3249059	0003990500	S	430	GGACTTCCGGGGTAATGACAGTGATGAAATGCAGGGGACCTGGTTGCCCC	1	-	28906485-28906493:28907072-28907112		Homo sapiens small nucleolar RNA host gene 12 (non-protein coding) (SNHG12), non-coding RNA.					
Homo sapiens	RefSeq	NM_173645.1	ILMN_163569	DNHL1	NM_173645.1	NM_173645.1		284944	27735076	NM_173645.1	DNHL1	NP_775916.1	ILMN_2052495	0007150161	S	2371	CCCCCATGACACAAGTTTACCTGTATAACAAACCTGCACATGTATCCCTG	2	+	84665425-84665474	2p11.2h-p11.2g	Homo sapiens dynein heavy chain-like 1 (DNHL1), mRNA.					
Homo sapiens	RefSeq	NM_173645.1	ILMN_163569	DNHL1	NM_173645.1	NM_173645.1		284944	27735076	NM_173645.1	DNHL1	NP_775916.1	ILMN_1676660	0005270736	S	1643	CAGGTGCCCACACCTCCTGAAGACTTTGCTGTTTTTGCAACTATGAAGCC	2	+	84664697-84664746	2p11.2h-p11.2g	Homo sapiens dynein heavy chain-like 1 (DNHL1), mRNA.					FLJ37357
Homo sapiens	RefSeq	NM_001008742.1	ILMN_21687	LOC401410	NM_001008742.1	NM_001008742.1		401410	56847613	NM_001008742.1	LOC401410	NP_001008742.1	ILMN_1745884	0003840095	S	2658	GCTTCAGTTTCCCCCTCTGTAAAATGGGATTAATAGCAGTGCCTCCCCTC	7	-	140759064-140759113	7q34d	Homo sapiens hypothetical LOC401410 (LOC401410), mRNA.					
Homo sapiens	RefSeq	NM_032133.2	ILMN_16999	MYCBPAP	NM_032133.3	NM_032133.3		84073	93204882	NM_032133.3	MYCBPAP	NP_115509.3	ILMN_1668649	0004730520	S	2861	AGACCCTACCCCTGACATCATCCTCTCTTCTCAAGAACCCATAGACCCCC	17	+	45961461-45961510	17q21.33b	Homo sapiens MYCBP associated protein (MYCBPAP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12151104] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12151104] [evidence IEP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12151104] [evidence IPI]	DKFZp434N1415; AMAP1; AMAP-1	DKFZp434N1415; AMAP1; AMAP-1
Homo sapiens	RefSeq	NM_148957.2	ILMN_28684	TNFRSF19	NM_148957.2	NM_148957.2		55504	31652245	NM_148957.2	TNFRSF19	NP_683760.1	ILMN_1704154	0002360672	I	3886	GGTAATGCGTGTGGCTGAATGGGCATAACCACTGTGGCTTCTTGTGCTGC	13	+	23147852-23147901	13q12.12a	Homo sapiens tumor necrosis factor receptor superfamily, member 19 (TNFRSF19), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10809768] [evidence NAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10809768] [evidence NAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 10809768] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [pmid 10809768] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10809768] [evidence IPI]	TAJ-alpha; TAJ; TRADE; TROY	TAJ; TAJ-alpha; TRADE; TROY
Homo sapiens	RefSeq	NM_005590.3	ILMN_6718	MRE11A	NM_005590.3	NM_005590.3		4361	56550106	NM_005590.3	MRE11A	NP_005581.2	ILMN_1760802	0002350195	I	140	AGAAGACAGCCTTGGGTCGCGATTGTGGGGCTTCGAAGAGTCCAGCAGTG	11	-	94226851-94226900	11q21b	Homo sapiens MRE11 meiotic recombination 11 homolog A (S. cerevisiae) (MRE11A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10802669] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9651580] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA recombination during mitosis [goid 19] [pmid 8530104] [evidence TAS]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [pmid 9651580] [evidence TAS]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 9931460] [evidence TAS]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 9705271] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 8530104] [evidence TAS]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9931460] [evidence TAS]	Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks [goid 14] [pmid 9705271] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9651580] [evidence TAS]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 10802669] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9590181] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 9651580] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	MRE11B; MRE11; ATLD; HNGS1	MRE11B; MRE11; ATLD; HNGS1
Homo sapiens	RefSeq	NM_005590.3	ILMN_6718	MRE11A	NM_005590.3	NM_005590.3		4361	56550106	NM_005590.3	MRE11A	NP_005581.2	ILMN_1658636	0001190753	A	4876	GCCACAAGGTGGTGCTTCTGCCATTAGACGCAGTTAGGAGGATGCAACTG	11	-	94150704-94150753	11q21b	Homo sapiens MRE11 meiotic recombination 11 homolog A (S. cerevisiae) (MRE11A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10802669] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9651580] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA recombination during mitosis [goid 19] [pmid 8530104] [evidence TAS]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [pmid 9651580] [evidence TAS]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 9931460] [evidence TAS]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 9705271] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 8530104] [evidence TAS]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9931460] [evidence TAS]	Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks [goid 14] [pmid 9705271] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9651580] [evidence TAS]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 10802669] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9590181] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 9651580] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	MRE11B; MRE11; ATLD; HNGS1	MRE11B; MRE11; ATLD; HNGS1
Homo sapiens	RefSeq	NM_001024228.1	ILMN_12213	ARF1	NM_001024228.1	NM_001024228.1		375	66879663	NM_001024228.1	ARF1	NP_001019399.1	ILMN_2330948	0001430259	A	1481	ACTATGCCGCAGGCCGCCCTACCCACCTTCAGGCAGCCTATGGGACGCAG	1	+	226353032-226353081	1q42.13c	Homo sapiens ADP-ribosylation factor 1 (ARF1), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 8599108] [evidence EXP]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 8533093] [evidence EXP]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 10402461] [evidence EXP]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15202998] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8529647] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IEA]	The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11031247] [evidence EXP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat [goid 48205] [pmid 16956762] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 1577740] [evidence TAS];  [goid 5057] [pmid 8529647] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14690595] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14654833] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	XM_944471.1	ILMN_30831	LOC651029	XM_944471.1	XM_944471.1		651029	88952603	XM_944471.1	LOC651029	XP_949564.1	ILMN_1773222	0007510593	S	61	ACCTCCTCTAACCCTAATCACCTCCCAAAGGCCCCGCCTCCTAATACTAT					PREDICTED: Homo sapiens hypothetical protein LOC651029 (LOC651029), mRNA.					
Homo sapiens	RefSeq	NM_019108.1	ILMN_5022	C19ORF61	NM_019108.2	NM_019108.2		56006	145301566	NM_019108.2	C19orf61	NP_061981.2	ILMN_1737005	0002750465	S	1586	CCGGGGCTTCCACCTGACTTCCTGGACTCTGAGGTCAACTTATTCCTGGT	19	-	48929362-48929411	19q13.31b	Homo sapiens chromosome 19 open reading frame 61 (C19orf61), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]			FLJ12886; F17127_1; DKFZp564H1322	F17127_1; DKFZp564H1322
Homo sapiens	RefSeq	NM_001039707.1	ILMN_41543	SDCCAG3	NM_001039707.1	NM_001039707.1		10807	89353280	NM_001039707.1	SDCCAG3	NP_001034796.1	ILMN_2271379	0006060451	I	431	GGCTATGGAAAGGGGAAATGTTCTAAGCAGAGCCCGTCAGGAGCCCACGG	9	-	139303464-139303513	9q34.3d	Homo sapiens serologically defined colon cancer antigen 3 (SDCCAG3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			NY-CO-3	NY-CO-3
Homo sapiens	RefSeq	NM_001006603.1	ILMN_164452	SYPL2	NM_001040709.1	NM_001040709.1		284612	105554420	NM_001040709.1	SYPL2	NP_001035799.1	ILMN_1679279	0007550138	S	3424	AGGGCTGGGCAGGGCCAAGTGCCTCATAGGACTCATGTTCTCTCCAACCA	1	+	109825932-109825981	1p13.3b	Homo sapiens synaptophysin-like 2 (SYPL2), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MG29	MG29
Homo sapiens	RefSeq	NM_152721.2	ILMN_17106	DOK6	NM_152721.3	NM_152721.3		220164	142360848	NM_152721.3	DOK6	NP_689934.2	ILMN_1785290	0007200341	S	1565	GAGCACAGGGTCTGTCCTTAGACATAATGGTGACCCTCCACAAGCTCTGT	18	+	65659978-65660027	18q22.2a	Homo sapiens docking protein 6 (DOK6), mRNA.			Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]	HsT3226; DOK5L; MGC20785	HsT3226; DOK5L; MGC20785
Homo sapiens	RefSeq	NM_001005483.1	ILMN_162937	OR4K5	NM_001005483.1	NM_001005483.1		79317	53828691	NM_001005483.1	OR4K5	NP_001005483.1	ILMN_2123392	0003440270	S	679	CTCAAGTCTTCAGCTGCAATGGCAAAGGCATTTTCTACGCTGGCTTCCCA	14	+	19459284-19459333	14q11.2a	Homo sapiens olfactory receptor, family 4, subfamily K, member 5 (OR4K5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR14-16	OR14-16
Homo sapiens	RefSeq	NM_024410.2	ILMN_24006	ODF1	NM_024410.2	NM_024410.2		4956	24430179	NM_024410.2	ODF1	NP_077721.1	ILMN_1708182	0003120427	S	758	GCAGCCCCTGCAACCCGTGCAGCCCATATGATCCTTGCAACCCGTGTTAT	8	+	103642197-103642246	8q22.3b	Homo sapiens outer dense fiber of sperm tails 1 (ODF1), mRNA.	Structure or material found in the flagella of mammalian sperm that surrounds each of the nine microtubule doublets, giving a 9 + 9 + 2 arrangement rather than the 9 + 2 pattern usually seen. These dense fibers are stiff and noncontractile [goid 1520] [evidence NAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence NAS]	ODFPGB; ODFPGA; SODF; ODFP; ODF27; HSPB10; ODFPG; ODF; MGC129928; MGC129929; RT7; ODF2	ODFPGB; ODFPGA; SODF; ODFP; ODF27; HSPB10; ODFPG; ODF; MGC129928; MGC129929; RT7; ODF2
Homo sapiens	RefSeq	NM_000228.2	ILMN_1092	LAMB3	NM_000228.2	NM_000228.2		3914	62868214	NM_000228.2	LAMB3	NP_000219.2	ILMN_1715684	0000730040	A	3668	ACAGCTTCCAGCCCGTTGCCCCACTCATCTGCCGCCTTTGCTTTTGGTTG	1	-	209788561-209788610	1q32.2b	Homo sapiens laminin, beta 3 (LAMB3), transcript variant 1, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 7774918] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 7550320] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LAMNB1	LAMNB1
Homo sapiens	RefSeq	NM_000228.2	ILMN_1092	LAMB3	NM_000228.2	NM_000228.2		3914	62868214	NM_000228.2	LAMB3	NP_000219.2	ILMN_1680054	0006350243	I	40	GGGAGACCCCCACATTCAAGAGGAGCTTTCAGGCGATCTGGAGAAAGAAC	1	-	209825731-209825780	1q32.2b	Homo sapiens laminin, beta 3 (LAMB3), transcript variant 1, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 7774918] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 7550320] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LAMNB1	LAMNB1
Homo sapiens	RefSeq	NM_001337.3	ILMN_8593	CX3CR1	NM_001337.3	NM_001337.3		1524	68348719	NM_001337.3	CX3CR1	NP_001328.1	ILMN_2088437	0002070168	S	2724	ATTGTCATTCCTGTATTCACCCGTCCAGACCTTGTTCACACTCTCACATG	3	-	39305319-39305368	3p22.2a	Homo sapiens chemokine (C-X3-C motif) receptor 1 (CX3CR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9390561] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9390561] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10754298] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10754298] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10754298] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10754298] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 10754298] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9931005] [evidence IPI]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	CMKDR1; GPR13; V28; GPRV28; CMKBRL1; CCRL1	CMKDR1; GPR13; V28; GPRV28; CMKBRL1; CCRL1
Homo sapiens	RefSeq	NM_001337.3	ILMN_8593	CX3CR1	NM_001337.3	NM_001337.3		1524	68348719	NM_001337.3	CX3CR1	NP_001328.1	ILMN_1745788	0005550373	S	2553	CCATCTGGGAAAATACCCCATCATTCATGCTACTGCCAACCTGGGGAGCC	3	-	39305490-39305539	3p22.2a	Homo sapiens chemokine (C-X3-C motif) receptor 1 (CX3CR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9390561] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9390561] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10754298] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10754298] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10754298] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10754298] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 10754298] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9931005] [evidence IPI]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	CMKDR1; GPR13; V28; GPRV28; CMKBRL1; CCRL1	CMKDR1; GPR13; V28; GPRV28; CMKBRL1; CCRL1
Homo sapiens	RefSeq	XM_936314.1	ILMN_26174	CAMK2B	NM_172081.1	NM_172081.1		816	26051211	NM_172081.1	CAMK2B	NP_742078.1	ILMN_1663397	0006220484	A	1314	CCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCA	7	-	44226974-44227023	7p13d	Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II beta (CAMK2B), transcript variant 5, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9060999] [evidence TAS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CAM2; MGC29528; CAMKB; CAMK2	
Homo sapiens	RefSeq	NM_017951.1	ILMN_20361	FLJ20297	NM_017951.1	NM_017951.1		55627	13443032	NM_017951.1	FLJ20297	NP_060421.1	ILMN_1658427	0003830630	I	736	TCCCCCGGCGGAGCCAACCCTCACTGATGGGAGCCCTGGGGTCATCTGTG	2	-	130630771-130630820	2q21.1b	Homo sapiens hypothetical protein FLJ20297 (FLJ20297), transcript variant 2, mRNA.				FLJ20756	FLJ20756
Homo sapiens	RefSeq	NM_007169.2	ILMN_18309	PEMT	NM_007169.2	NM_007169.2		10400	22538481	NM_007169.2	PEMT	NP_009100.2	ILMN_1803402	0005570093	I	96	GCTGAGGCTATTCGTCGGTGACCTGTGGGACTCGAGCTATTCCTGCAGCT	17	-	17485600-17485649	17p11.2g	Homo sapiens phosphatidylethanolamine N-methyltransferase (PEMT), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9989271] [evidence TAS]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [pmid 9989271] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9989271] [evidence TAS]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-methionine + phosphatidylethanolamine = S-adenosyl-L-homocysteine + phosphatidyl-N-methylethanolamine [goid 4608] [pmid 9989271] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PEAMT; PEMPT; PNMT; MGC2483; PEMT2	PEAMT; PEMPT; PNMT; MGC2483; PEMT2
Homo sapiens	RefSeq	NM_138381.2	ILMN_26869	OXNAD1	NM_138381.2	NM_138381.2		92106	83816972	NM_138381.2	OXNAD1	NP_612390.1	ILMN_3244030	0006590739	S	3448	GTGGCTTGGAATTCATAGTGCGGTGGCTCAGAGTATAGGCTCGAAAGCCC	3	+	16321485-16321534	3p24.3e	Homo sapiens oxidoreductase NAD-binding domain containing 1 (OXNAD1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC15763	MGC15763
Homo sapiens	RefSeq	NR_024041.1	ILMN_363586	LOC729338	NR_024041.1	NR_024041.1		729338	194595468	NR_024041.1	LOC729338		ILMN_3234823	0000670553	S	21	GGCTGCCGGCTGGGGACCTGGCATCTAACTACCATACAAGTTCAGACCAA	4	-	123653318-123653348:123653574-123653592	4q27d	Homo sapiens CETN4 pseudogene (LOC729338), non-coding RNA.					
Homo sapiens	RefSeq	XM_945978.1	ILMN_43565	MEI1	NM_152513.3	NM_152513.3		150365	90403580	NM_152513.3	MEI1	NP_689726.3	ILMN_1755789	0006250475	I	2341	GCAGCTAGTCTATACTCACCATCCGCTCCTGCTCAGGTTCTTTCTGTTGT	22	+	40496683-40496732	22q13.2b	Homo sapiens meiosis inhibitor 1 (MEI1), mRNA. XM_934904 XM_934906 XM_934908 XM_934911 XM_934912 XM_945977 XM_945978 XM_945980 XM_945982-XM_945987 XM_945989		Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC40042	
Homo sapiens	RefSeq	XM_945987.1	ILMN_43565	MEI1	NM_152513.3	NM_152513.3		150365	90403580	NM_152513.3	MEI1	NP_689726.3	ILMN_1810254	0004640102	A	3372	AGGACCCTCTATTGTCCCAGGCCTGTGTTGGCTGCCTGGAGGCCTTGCTT	22	+	40519780-40519829	22q13.2b	Homo sapiens meiosis inhibitor 1 (MEI1), mRNA. XM_934904 XM_934906 XM_934908 XM_934911 XM_934912 XM_945977 XM_945978 XM_945980 XM_945982-XM_945987 XM_945989		Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC40042	
Homo sapiens	RefSeq	NM_152513.3	ILMN_43565	MEI1	NM_152513.3	NM_152513.3		150365	90403580	NM_152513.3	MEI1	NP_689726.3	ILMN_2073202	0001340326	S	3797	GACATGCTCTGCCTGGGAGGGGTGGCTGTATCCCTGTCCCACATCAGAAA	22	+	40521790-40521797:40525204-40525245	22q13.2b	Homo sapiens meiosis inhibitor 1 (MEI1), mRNA. XM_934904 XM_934906 XM_934908 XM_934911 XM_934912 XM_945977 XM_945978 XM_945980 XM_945982-XM_945987 XM_945989		Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC40042	MGC40042
Homo sapiens	RefSeq	XM_001128984.1	ILMN_167953	LOC728362	XM_001128984.1	XM_001128984.1		728362	113418154	XM_001128984.1	LOC728362	XP_001128984.1	ILMN_3223148	0001240433	A	1	GTCTACAGCTCCCAGAGTGAGCAACGCAGAAGATGGGTGATTTCTGCATT				6q15a	PREDICTED: Homo sapiens hypothetical LOC728362 (LOC728362), mRNA.					
Homo sapiens	RefSeq	NM_001140.3	ILMN_182092	ALOX15	NM_001140.3	NM_001140.3		246	40316936	NM_001140.3	ALOX15	NP_001131.3	ILMN_2403534	0005220278	A	2538	CGTGGAGACGGGGCCTCACTATGTTGCCTAGGCTGGAAATAGGATTTTGA	17	-	4534310-4534359	17p13.2c	Homo sapiens arachidonate 15-lipoxygenase (ALOX15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 3202857] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10200270] [evidence TAS]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [pmid 3202857] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,11Z,13E)-(15S)-15-hydroperoxyicosa-5,8,11,13-tetraenoate [goid 50473] [evidence IEA]	15-LOX2	15-LOX2
Homo sapiens	RefSeq	NM_004837.2	ILMN_4748	GGPS1	NM_001037277.1	NM_001037277.1		9453	83700219	NM_001037277.1	GGPS1	NP_001032354.1	ILMN_1692276	0001260520	S	895	GCCTATAAACAGATTGATGCACGTGGTGGGAACCCTGAGCTAGTAGCCTT	1	+	233572618-233572667	1q42.3b	Homo sapiens geranylgeranyl diphosphate synthase 1 (GGPS1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9741684] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate [goid 4337] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate [goid 4161] [evidence IEA]; Catalysis of the reaction: trans,trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate [goid 4311] [pmid 9741684] [evidence IDA]; Catalysis of the reaction: trans,trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate [goid 4311] [pmid 10026212] [evidence IDA]; Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate [goid 4337] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GGPPS1; GGPPS	GGPPS1; GGPPS
Homo sapiens	RefSeq	XM_001133935.2	ILMN_171696	LOC730185	XM_001133935.2	XM_001133935.2		730185	169207730	XM_001133935.2	LOC730185	XP_001133935.1	ILMN_3297503	0003800372	M	1675	TCCTCCCATGCAGTCACACACTCTCACATGCAGTCACACCCTCTCGTGCA				14q32.33b	PREDICTED: Homo sapiens hypothetical LOC730185 (LOC730185), mRNA.					
Homo sapiens	RefSeq	NM_020151.2	ILMN_9703	STARD7	NM_020151.3	NM_020151.3		56910	151301034	NM_020151.3	STARD7	NP_064536.2	ILMN_1687140	0005810521	I	160	GAGTGCCTGGTGTAGCAGTCGCGGAGCCATCCCGGCGTCTGCTGCCATGA	2	-	96874364-96874413	2q11.2a	Homo sapiens StAR-related lipid transfer (START) domain containing 7 (STARD7), mRNA.				GTT1	GTT1
Homo sapiens	Unigene	Hs.561144	ILMN_114684	HS.561144	Hs.561144		Hs.561144		18984804	BM674906			ILMN_1890829	0003830079	S	242	CAAGAAAGTTGGGGCAGTCACAGCAGCCTGAGGAGATGGAATAAGCCCAG	3	-	100455693-100455742		UI-E-EJ0-ahn-e-19-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahn-e-19-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014574.2	ILMN_162469	STRN3	NM_014574.3	NM_014574.3		29966	142976674	NM_014574.3	STRN3	NP_055389.3	ILMN_1772946	0001570575	S	3034	GATCTCACTGACCCGTTGCCCTGTAACCACTTTCTTTCCTTCTTTTGCCT	14	-	31363891-31363940	14q12e	Homo sapiens striatin, calmodulin binding protein 3 (STRN3), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10748158] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7910562] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10748158] [evidence NAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 7910562] [evidence IDA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 10748158] [evidence NAS]	SG2NA	SG2NA
Homo sapiens	RefSeq	XM_934051.1	ILMN_34061	LOC646918	XM_934051.1	XM_934051.1		646918	89036692	XM_934051.1	LOC646918	XP_939144.1	ILMN_1807424	0005220494	S	94	GACTATATCCAAGAGTACCAGAAAAACAGCATAGGAGCTGAATTTCCTAC	13	+	38048811-38048839:38050866-38050886		PREDICTED: Homo sapiens hypothetical protein LOC646918 (LOC646918), mRNA.					
Homo sapiens	RefSeq	XM_001726743.1	ILMN_338300	LOC100133045	XM_001726743.1	XM_001726743.1		100133045	169211952	XM_001726743.1	LOC100133045	XP_001726795.1	ILMN_3203186	0006020092	A	211	GGTGAGTAGGGCGACATCTGGTGGCCGGTTGTTGAAGGTCATTGCAGAGA				17q25.3c	PREDICTED: Homo sapiens hypothetical protein LOC100133045 (LOC100133045), mRNA.					
Homo sapiens	RefSeq	NM_001012241.1	ILMN_308965	MSL1	NM_001012241.1	NM_001012241.1		339287	149944432	NM_001012241.1	MSL1	NP_001012241.1	ILMN_3245973	0000430551	S	3275	GCCCTACCCAGGGGACTCCCCAGTTTCTGACTTGAAGTAGACTGAGAAGA	17	+	35546026-35546075	17q21.1c	Homo sapiens male-specific lethal 1 homolog (Drosophila) (MSL1), mRNA.				DKFZp686J17211; MGC141861	DKFZp686J17211; MGC141861
Homo sapiens	RefSeq	XM_931000.1	ILMN_33055	LOC642666	XM_931000.2	XM_931000.2		642666	113421648	XM_931000.2	LOC642666	XP_936093.1	ILMN_1793239	0006520736	S	151	ACCGCCCTGATAGGAAAGGCAGAAGCCATAGCTCTCACCAAACCTCCAGC	10	+	82401700-82401717:82403226-82403257	10q23.1a	PREDICTED: Homo sapiens hypothetical LOC642666 (LOC642666), mRNA.					
Homo sapiens	RefSeq	NM_001004702.1	ILMN_623	OR4C3	NM_001004702.1	NM_001004702.1		256144	52317234	NM_001004702.1	OR4C3	NP_001004702.1	ILMN_1780041	0003520497	S	339	GGGGAGAACCATCTCTTATGAGTGCTGCATGGCTCAGCTCTTTGGAGCTC	11	+	48303407-48303456	11p11.2a	Homo sapiens olfactory receptor, family 4, subfamily C, member 3 (OR4C3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-98	OR11-98
Homo sapiens	RefSeq	NM_003012.3	ILMN_21487	SFRP1	NM_003012.3	NM_003012.3		6422	56117837	NM_003012.3	SFRP1	NP_003003.3	ILMN_2149164	0006960379	S	3920	CACTTGGCTCTTGGTACCTGTGGGTTAGCATCAAGTTCTCCCCAGGGTAG	8	-	41239120-41239169	8p11.21b	Homo sapiens secreted frizzled-related protein 1 (SFRP1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9192640] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9391078] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9192640] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9192640] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FRP; FrzA; SARP2; FRP1; FRP-1	FRP; FrzA; SARP2; FRP1; FRP-1
Homo sapiens	RefSeq	XM_933971.1	ILMN_45248	NBPF9	XM_933971.1	XM_933971.1		440670	88943109	XM_933971.1	NBPF9	XP_939064.1	ILMN_1712903	0006900500	I	2	GAAACAGATGGTCATAGAATTGTTTCAGTGCTTGTGAGTGCAGCAACCCA	1	-	146074177-146074226		PREDICTED: Homo sapiens neuroblastoma breakpoint family, member 9, transcript variant 4 (NBPF9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NM_033449.1	ILMN_3885	FCHSD1	NM_033449.1	NM_033449.1		89848	28875785	NM_033449.1	FCHSD1	NP_258260.1	ILMN_1783847	0003460241	S	3799	CCCTCTGGCCTAAGGTAGGGGAGGCCTTCTCAGATTGTGGGGCACATTGT	5	-	141019340-141019389	5q31.3c	Homo sapiens FCH and double SH3 domains 1 (FCHSD1), mRNA.				FLJ00007; NWK2	FLJ00007; NWK2
Homo sapiens	RefSeq	NM_033449.1	ILMN_3885	FCHSD1	NM_033449.1	NM_033449.1		89848	28875785	NM_033449.1	FCHSD1	NP_258260.1	ILMN_2102702	0005310408	S	3871	TCCCAGTCCAGGAGGAAAGAGCCAAGGCCCACTTTTGGGATCAGGTGCCT	5	-	141019268-141019317	5q31.3c	Homo sapiens FCH and double SH3 domains 1 (FCHSD1), mRNA.				FLJ00007; NWK2	FLJ00007; NWK2
Homo sapiens	RefSeq	NM_001100819.1	ILMN_335241	MOBKL3	NM_001100819.1	NM_001100819.1		25843	155030223	NM_001100819.1	MOBKL3	NP_001094289.1	ILMN_3229859	0006510669	A	1677	TACACCCCCTCTCCCACGAAGTTTATGTTTGGATTACATGCACGTGTGAG	2	+	198124637-198124686	2q33.1b	Homo sapiens MOB1, Mps One Binder kinase activator-like 3 (yeast) (MOBKL3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	2C4D; MGC12264; MOB1; CGI-95; PREI3; MOB3	2C4D; MGC12264; MOB1; CGI-95; PREI3; MOB3
Homo sapiens	RefSeq	XM_001719498.1	ILMN_342824	LOC100132317	XM_001719498.1	XM_001719498.1		100132317	169172799	XM_001719498.1	LOC100132317	XP_001719550.1	ILMN_3241912	0000510072	S	114	AGCACTGCAGACTCAGCTGAGCACCGATACAAAGAAAGACAAACATCCTG	8	-	132295-132298:140392-140437	8p23.3b	PREDICTED: Homo sapiens similar to C20orf69 protein (LOC100132317), mRNA.					
Homo sapiens	Unigene	Hs.537109	ILMN_103192	HS.537109	Hs.537109		Hs.537109		34530272	AK124480			ILMN_1889864	0004060411	S	1456	TCAGGCACACTGAGTGACAGAGGCTGACCTGTCGCGGGGGCTCTAGTATC	10	-	49322361-49322410		Homo sapiens cDNA FLJ42489 fis, clone BRACE2032538					
Homo sapiens	RefSeq	XM_929710.1	ILMN_37307	LOC644512	XM_929710.1	XM_929710.1		644512	89058843	XM_929710.1	LOC644512	XP_934803.1	ILMN_1748007	0002100113	S	3540	TTAGGGTTTTGTTATTTAAGAAAATGGAATGTAATGGTACTTTTACAAAC	22	+	27872699-27872748		PREDICTED: Homo sapiens hypothetical protein LOC644512 (LOC644512), mRNA.					
Homo sapiens	RefSeq	NM_005747.3	ILMN_2564	ELA3A	NM_005747.3	NM_005747.3		10136	58331213	NM_005747.3	ELA3A	NP_005738.3	ILMN_2177970	0000430753	S	714	TCCACGGTGTGACCAGCTTTGTTTCTGGCTTTGGCTGCAACTTCATCTGG	1	+	22208837-22208886	1p36.12a	Homo sapiens elastase 3A, pancreatic (ELA3A), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 2826474] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 2826474] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 2826474] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2460440] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ELA3	ELA3
Homo sapiens	RefSeq	NM_005747.3	ILMN_2564	ELA3A	NM_005747.3	NM_005747.3		10136	58331213	NM_005747.3	ELA3A	NP_005738.3	ILMN_1677559	0002100592	S	246	CGAGGGATCTGACCTACCAGGTGGTGTTGGGTGAGTACAACCTTGCTGTG	1	+	22204624-22204624:22204742-22204790	1p36.12a	Homo sapiens elastase 3A, pancreatic (ELA3A), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 2826474] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 2826474] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 2826474] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2460440] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ELA3	ELA3
Homo sapiens	RefSeq	NM_001630.1	ILMN_2382	ANXA8	NM_001630.1	NM_001630.1		244	4502112	NM_001630.1	ANXA8	NP_001621.1	ILMN_1778087	0001400711	S	1586	CATCCTTCAGCAGCTGAGAAATGAACACGAATCCATCCCAACCGAGATGC	10	+	47232690-47232739	10q11.22b	Homo sapiens annexin A8 (ANXA8), mRNA.		The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	ANXA8L2; FLJ32754; ANX8; VAC beta	ANXA8L2; FLJ32754; ANX8; VAC beta
Homo sapiens	RefSeq	NM_001025231.1	ILMN_27262	KPRP	NM_001025231.1	NM_001025231.1		448834	68563514	NM_001025231.1	KPRP	NP_001020402.1	ILMN_1780649	0001690008	S	2234	ACTTCCTAGAACTCACTGCATCCCCCGCACTACTTGGTAACTGCCTGGTG	1	+	151000864-151000913	1q21.3b	Homo sapiens keratinocyte proline-rich protein (KPRP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C1orf45	C1orf45
Homo sapiens	Unigene	Hs.548831	ILMN_109916	HS.548831	Hs.548831		Hs.548831		3049145	AA909740			ILMN_1856044	0002340176	S	66	AAAGGCATAAACAATGTAAAATTGTACTAGTCATAGAAATGAAAAGTTGT	3	+	83658521-83658570		ol09g06.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1523002 3, mRNA sequence					
Homo sapiens	RefSeq	XM_942615.1	ILMN_33883	LOC652889	XM_942615.1	XM_942615.1		652889	89065302	XM_942615.1	LOC652889	XP_947708.1	ILMN_1713107	0004010520	S	447	CCTGCAGGAAGAGTGTGTAAGACTGAGGGAACGGCACGTGCAAAGGTCCT					PREDICTED: Homo sapiens similar to nodal modulator 2 isoform 2 (LOC652889), mRNA.					
Homo sapiens	RefSeq	NM_153182.1	ILMN_30030	MINA	NM_032778.4	NM_032778.4		84864	110227622	NM_032778.4	MINA	NP_116167.3	ILMN_1689624	0003360544	A	1324	CGGGGCTTGTATTTGATACTGCAAAGGAAGACGTGGAGTTACGGACCGGC	3	-	99152340-99152389	3q11.2c	Homo sapiens MYC induced nuclear antigen (MINA), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		NO52; FLJ14393; DKFZp762O1912; MDIG; MINA53	NO52; FLJ14393; DKFZp762O1912; MDIG; MINA53
Homo sapiens	RefSeq	XM_928146.1	ILMN_44660	LOC653570	XM_928146.1	XM_928146.1		653570	88953469	XM_928146.1	LOC653570	XP_933239.1	ILMN_1705004	0004730725	S	4	ACGGATTTGGAAGAGGAAATAGACATCCCTTCTCCGGTGGGTGAAGGCAT	2	-	109986260-109986270:109991620-109991658		PREDICTED: Homo sapiens similar to tubulin tyrosine ligase (LOC653570), mRNA.					
Homo sapiens	Unigene	Hs.54940	ILMN_73026	HS.54940	Hs.54940		Hs.54940		24043868	BU858876			ILMN_1877039	0001570053	S	347	TGATAGCACAGACCAGTGGGGAAGGCAGACCAGAGGGGTACAGGAGGCTG	15	-	78453797-78453846		AGENCOURT_10425186 NIH_MGC_126 Homo sapiens cDNA clone IMAGE:6649626 5, mRNA sequence					
Homo sapiens	RefSeq	NM_000069.1	ILMN_27541	CACNA1S	NM_000069.1	NM_000069.1		779	4557400	NM_000069.1	CACNA1S	NP_000060.1	ILMN_1667980	0003840692	S	5846	GATGCCCACACAGCATCAGCATGGGCTTAGAGCTGGCATGACCAATGGGG	1	-	199275535-199275581:199275582-199275584	1q32.1b	Homo sapiens calcium channel, voltage-dependent, L type, alpha 1S subunit (CACNA1S), mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11206130] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11206130] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 9852570] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [pmid 17204937] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [pmid 11206130] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle [goid 2074] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [evidence IEA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IEA]; Any process by which skeletal muscle fibers change their phenotypic profiles in response to altered functional demands and a variety of signals [goid 43501] [evidence IEA]; The process whose specific outcome is the progression of a muscle cell over time, from its formation to the mature structure. Muscle cell development does not include the steps involved in committing an unspecified cell to the muscle cell fate [goid 55001] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 9852570] [evidence IDA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 17418573] [evidence IMP]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [pmid 9852570] [evidence IDA];  [goid 15270] [pmid 9852570] [evidence IDA]	CCHL1A3; CACNL1A3; hypoPP; MHS5; HOKPP	CCHL1A3; CACNL1A3; hypoPP; MHS5; HOKPP
Homo sapiens	RefSeq	NM_000373.1	ILMN_22317	UMPS	NM_000373.1	NM_000373.1		7372	4507834	NM_000373.1	UMPS	NP_000364.1	ILMN_1757437	0004180465	S	1790	CAGCCACAGTCCTGTCTGGGTTAGGGTCTTCCACATTTGAGGATCCTTCC	3	+	125945862-125945911	3q21.2a	Homo sapiens uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5'-decarboxylase) (UMPS), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9042911] [evidence EXP]	The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate [goid 6222] [pmid 6893554] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]	Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4588] [pmid 9042911] [evidence EXP]; Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4588] [pmid 6893554] [evidence TAS]; Catalysis of the reaction: orotidine 5'-phosphate = UMP + CO2 [goid 4590] [pmid 9042911] [evidence EXP]; Catalysis of the reaction: orotidine 5'-phosphate = UMP + CO2 [goid 4590] [pmid 6893554] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	OPRT	OPRT
Homo sapiens	RefSeq	NM_018977.2	ILMN_163681	NLGN3	NM_018977.2	NM_018977.2		54413	51593087	NM_018977.2	NLGN3	NP_061850.2	ILMN_1759700	0003520039	S	3604	GGTGAACAACGTACTATGGAAGCCACATCACTATTGGGCCCCCAGGTCTG	X	+	70307485-70307534	Xq13.1c	Homo sapiens neuroligin 3 (NLGN3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 15150161] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 17292328] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [pmid 12669065] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [pmid 15150161] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17292328] [evidence IPI]	HNL3; AUTSX1; KIAA1480; ASPGX1	HNL3; AUTSX1; KIAA1480; ASPGX1
Homo sapiens	RefSeq	XR_041215.1	ILMN_352376	C22ORF27	XR_041215.1	XR_041215.1		150291	169215561	XR_041215.1	C22orf27		ILMN_3196690	0000050164	A	1398	GATGGCACTGGACTCGCCGTTATCTTGAGGAGCCAGGAGCTGAAATGGCT	22	+	29652430-29652479	22q12.2c	PREDICTED: Homo sapiens misc_RNA (C22orf27), miscRNA.					
Homo sapiens	RefSeq	NM_024722.1	ILMN_14845	ACBD4	NM_024722.1	NM_024722.1		79777	13376028	NM_024722.1	ACBD4	NP_078998.1	ILMN_1676288	0000070068	S	1729	AGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCTGGGGCCTGGAAGA	17	+	40577074-40577123	17q21.31d	Homo sapiens acyl-Coenzyme A binding domain containing 4 (ACBD4), mRNA.			Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	HMFT0700; FLJ90623; FLJ13322	HMFT0700; FLJ90623; FLJ13322
Homo sapiens	Unigene	Hs.552008	ILMN_110797	HS.552008	Hs.552008		Hs.552008		24792156	CA429430			ILMN_1829840	0002350288	S	312	TGGGACATCACACACGCTAAAACTCAATGCCCGTTCCATGGCGGCAGCTC	2	-	9630478-9630527		UI-H-FH1-bfm-b-13-0-UI.s1 NCI_CGAP_FH1 Homo sapiens cDNA clone UI-H-FH1-bfm-b-13-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_021151.2	ILMN_3745	CROT	NM_021151.2	NM_021151.2		54677	31542324	NM_021151.2	CROT	NP_066974.2	ILMN_1693090	0003830274	S	2790	TGGCTGCAGTGAGCTGTGATGTGCCCTTATGCTATAGCCTGGGCAAGAGC	7	+	86866662-86866711	7q21.12a	Homo sapiens carnitine O-octanoyltransferase (CROT), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10486279] [evidence TAS]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 10486279] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 10486279] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: octanoyl-CoA + L-carnitine = CoA + L-octanoylcarnitine [goid 8458] [pmid 10486279] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	COT	COT
Homo sapiens	RefSeq	NM_001080141.1	ILMN_165659	CT47A6	NM_001080141.1	NM_001080141.1		728062	121949793	NM_001080141.1	CT47A6	NP_001073610.1	ILMN_2231845	0005670451	S	13	CCCAACTTGTCTAAGTCCTCTCAGGCCAGCCTTGGTGGGAGGTTTCTAGG	X	-	120095275-120095324	Xq24d-q24e	Homo sapiens cancer/testis antigen family 47, member A6 (CT47A6), mRNA.					
Homo sapiens	RefSeq	XM_926689.1	ILMN_165659	CT47A6	NM_001080141.1	NM_001080141.1		728062	121949793	NM_001080141.1	CT47A6	NP_001073610.1	ILMN_1654899	0006270593	S	928	ACAGAGGAACCAGACGCAGAGGAACCAGCCACAGAAGAACCGACCGCACA	X	-	120094360-120094409	Xq24d-q24e	Homo sapiens cancer/testis antigen family 47, member A6 (CT47A6), mRNA.					
Homo sapiens	RefSeq	NM_000762.4	ILMN_16634	CYP2A6	NM_000762.4	NM_000762.4		1548	20522239	NM_000762.4	CYP2A6	NP_000753.2	ILMN_2091632	0001660482	S	1117	TTGGCCCGCAGAGTCAAAAAGGACACCAAGTTTCGGGATTTCTTCCTCCC	19	-	46043042-46043091	19q13.2b	Homo sapiens cytochrome P450, family 2, subfamily A, polypeptide 6 (CYP2A6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 15665333] [evidence EXP]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 2322567] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: coumarin + O2 + NADPH + H+ = hydroxycoumarin + H2O + NADP+ [goid 8389] [pmid 15665333] [evidence EXP]; Catalysis of the reaction: coumarin + O2 + NADPH + H+ = hydroxycoumarin + H2O + NADP+ [goid 8389] [pmid 7864805] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 9827545] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	CPA6; P450C2A; P450PB; CYP2A3; CYP2A	CPA6; P450C2A; P450PB; CYP2A3; CYP2A
Homo sapiens	RefSeq	NM_173474.2	ILMN_28116	NTAN1	NM_173474.2	NM_173474.2		123803	40789088	NM_173474.2	NTAN1	NP_775745.1	ILMN_1815552	0005960477	I	663	GCAGAGACAGAACAACTTCGTATAGGACCGTACTCCTGGACACCATTTCC	16	-	15132476-15132525	16p13.11b	Homo sapiens N-terminal asparagine amidase (NTAN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IEA]	 [goid 8418] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp666E058	DKFZp666E058
Homo sapiens	RefSeq	XR_038782.1	ILMN_350042	LOC100132373	XR_038782.1	XR_038782.1		100132373	169216535	XR_038782.1	LOC100132373		ILMN_3247492	0003170632	S	181	TACAGCCCCTCGTGAGAACCGAGCCACAGTCATGTTTCCTACATCAGCCT	X	-	116037-116086		PREDICTED: Homo sapiens misc_RNA (LOC100132373), miscRNA.					
Homo sapiens	RefSeq	NM_020143.2	ILMN_26243	PNO1	NM_020143.2	NM_020143.2		56902	31377729	NM_020143.2	PNO1	NP_064528.1	ILMN_1753607	0002000450	S	1870	GCTTAGCCTACCTTAAAAGGGCTCCGAACACTACATTAGCCTACAGTTGG	2	+	68256487-68256536	2p14b	Homo sapiens partner of NOB1 homolog (S. cerevisiae) (PNO1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 15497447] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	KHRBP1	KHRBP1
Homo sapiens	RefSeq	NM_024315.2	ILMN_6840	C7ORF23	NM_024315.2	NM_024315.2		79161	34147374	NM_024315.2	C7orf23	NP_077291.1	ILMN_1751143	0004290575	S	536	TGCAAACCTGTACTTCCATGATGTGGGAAGGTGAGGCTGCCAAGGAGAAG	7	-	86825935-86825951:86825952-86825984	7q21.12a	Homo sapiens chromosome 7 open reading frame 23 (C7orf23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MM-TRAG; MGC4175	MM-TRAG; MGC4175
Homo sapiens	RefSeq	NM_032168.1	ILMN_14393	WDR75	NM_032168.1	NM_032168.1		84128	29789282	NM_032168.1	WDR75	NP_115544.1	ILMN_1801869	0006620670	S	2526	AGACTACAGCTGGATAGCTGCCCTTTAAGCCTTGGAGATGGGGAGGATCC	2	+	190048361-190048388:190048389-190048410	2q32.2a	Homo sapiens WD repeat domain 75 (WDR75), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FLJ12519; DKFZp781N1244	FLJ12519; DKFZp781N1244
Homo sapiens	RefSeq	NM_138820.2	ILMN_11040	HIGD2A	NM_138820.2	NM_138820.2		192286	52851396	NM_138820.2	HIGD2A	NP_620175.1	ILMN_1774334	0007510315	S	458	AGGCCCATGTGTCGCTGGGGAGGAAGTGACCCTTTGTGTAACTGTAACCG	5	+	175749204-175749253	5q35.2d	Homo sapiens HIG1 hypoxia inducible domain family, member 2A (HIGD2A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC2198	MGC2198
Homo sapiens	RefSeq	NM_199440.1	ILMN_3394	HSPD1	NM_199440.1	NM_199440.1		3329	41399284	NM_199440.1	HSPD1	NP_955472.1	ILMN_1774410	0002140338	I	40	CAGGACGCTGACGCGAAGACTCGGAGGCGGAAGAAAAAAGGAGCTGTTTC	2	-	198364909-198364958	2q33.1b	Homo sapiens heat shock 60kDa protein 1 (chaperonin) (HSPD1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 18229457] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18086682] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11807771] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 18086682] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [pmid 11807771] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 9243807] [evidence IDA]; A protein complex that phosphorylates cyclin-dependent kinases such as Cdc2 on Thr161 (or an equivalent residue); contains a catalytic subunit and a regulatory subunit, and some examples also include an assembly factor [goid 19907] [pmid 11445587] [evidence IDA]; Small membrane-bounded organelle formed by pinching off of a coated region of membrane. Some coats are made of clathrin, whereas others are made from other proteins [goid 30135] [pmid 11807771] [evidence IDA]; A multiprotein complex that consists of at least three proteins, CD14, TLR4, and MD-2, each of which is glycosylated [goid 46696] [pmid 17164250] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that contributes to cytokine production by a B cell [goid 2368] [pmid 16148103] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of a T cell mediated immune response to tumor cell [goid 2842] [pmid 10663613] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 17823127] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 11050098] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-alpha production [goid 32727] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-10 production [goid 32733] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [pmid 16148103] [evidence IDA]; The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones [goid 42026] [pmid 11050098] [evidence IDA]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 16148103] [evidence IDA]; Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 17823127] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 18086682] [evidence IMP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgG isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgG constant region gene segments in the immunoglobulin heavy chain locus [goid 48291] [pmid 16148103] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 18086682] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 17164250] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with lipopolysaccharide [goid 1530] [pmid 17164250] [evidence IDA]; Interacting selectively with one of the p53 family of proteins [goid 2039] [pmid 18086682] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 11807771] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 11050098] [evidence IC ]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 10205158] [evidence IPI]	HuCHA60; SPG13; CPN60; HSP65; GROEL; HSP60	HuCHA60; GROEL; HSP60; SPG13; CPN60; HSP65
Homo sapiens	RefSeq	NM_148672.2	ILMN_29758	CCL28	NM_148672.2	NM_148672.2		56477	90970326	NM_148672.2	CCL28	NP_683513.1	ILMN_2228845	0007610373	S	388	CAAGAGGAACAGTAACAGGGCACATCAGGGGAAACACGAAACATACGGCC	5	-	43417735-43417784	5p12c	Homo sapiens chemokine (C-C motif) ligand 28 (CCL28), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10781587] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10781587] [evidence TAS]	MEC; SCYA28; CCK1; MGC71902	MEC; SCYA28; CCK1; MGC71902
Homo sapiens	RefSeq	XM_940120.1	ILMN_38594	LOC651008	XM_940120.1	XM_940120.1		651008	89042533	XM_940120.1	LOC651008	XP_945213.1	ILMN_1686995	0002190053	S	623	GCCCAGATCACACAATGAGTAAAGATGCAGCCCTGGGAATGTCCGATGCC					PREDICTED: Homo sapiens similar to mitogen-activated protein kinase kinase 3 isoform A (LOC651008), mRNA.					
Homo sapiens	RefSeq	NM_001059.1	ILMN_19640	TACR3	NM_001059.1	NM_001059.1		6870	7669547	NM_001059.1	TACR3	NP_001050.1	ILMN_1658369	0004250519	S	1398	GACACCACCAGGTCCAGTCGGAAGAAAAGAGCAACGCCAAGAGACCCAAG	4	-	104730379-104730428	4q24c	Homo sapiens tachykinin receptor 3 (TACR3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1374246] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [pmid 8990205] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with tachykinin to initiate a change in cell activity [goid 4995] [pmid 8990205] [evidence TAS]	TAC3RL; MGC148061; MGC148060; NK3R	TAC3RL; MGC148061; MGC148060; NK3R
Homo sapiens	RefSeq	NM_021205.4	ILMN_163838	RHOU	NM_021205.4	NM_021205.4		58480	45827773	NM_021205.4	RHOU	NP_067028.1	ILMN_3242586	0001230470	S	4179	GCAAGGCCTTCTCTCCAGACTATCGTAACCTGGTGCCTTACCAAGTTGTG	1	+	226948891-226948940	1q42.13c	Homo sapiens ras homolog gene family, member U (RHOU), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18086875] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15350535] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	WRCH1; CDC42L1; hG28K; ARHU; FLJ10616; fJ646B12.2; DJ646B12.2	WRCH1; CDC42L1; hG28K; ARHU; FLJ10616; fJ646B12.2; DJ646B12.2
Homo sapiens	RefSeq	NM_005104.2	ILMN_13354	BRD2	NM_005104.2	NM_005104.2		6046	12408641	NM_005104.2	BRD2	NP_005095.1	ILMN_1758918	0001340475	S	4613	GCCCTGGGGGTTTCAGTCATCTCCCCATTTGGTCCCCTGGACTGTCTTTG	6	+	33056979-33057028	6p21.32a	Homo sapiens bromodomain containing 2 (BRD2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9693039] [evidence TAS]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9693039] [evidence TAS]	FLJ31942; RNF3; D6S113E; RING3; DKFZp686N0336; NAT; FSRG1; KIAA9001	FLJ31942; RNF3; D6S113E; RING3; DKFZp686N0336; NAT; FSRG1; KIAA9001
Homo sapiens	RefSeq	NM_032413.2	ILMN_2226	C15ORF48	NM_032413.2	NM_032413.2		84419	37694068	NM_032413.2	C15orf48	NP_115789.1	ILMN_1805410	0001110373	A	449	GAAGAGTTGCAAAATGTCCAAAGGGTGACCAAATGACGAGCCCTCGCCTC	15	+	43512471-43512506:43512507-43512520	15q21.1a	Homo sapiens chromosome 15 open reading frame 48 (C15orf48), transcript variant 2, mRNA.				FLJ22645; MGC32925; NMES1; FOAP-11	FLJ22645; MGC32925; NMES1; FOAP-11
Homo sapiens	RefSeq	NM_032413.2	ILMN_2226	C15ORF48	NM_032413.2	NM_032413.2		84419	37694068	NM_032413.2	C15orf48	NP_115789.1	ILMN_1654696	0004070719	I	147	GCGCGGTGGACGGTTTGGCGCCCACCAGGCGATCAATACTTTGGATTTTT	15	+	43510201-43510250	15q21.1a	Homo sapiens chromosome 15 open reading frame 48 (C15orf48), transcript variant 2, mRNA.				FLJ22645; MGC32925; NMES1; FOAP-11	FLJ22645; MGC32925; NMES1; FOAP-11
Homo sapiens	RefSeq	NR_024271.1	ILMN_370509	SEPT13	NR_024271.1	NR_024271.1		641977	210032242	NR_024271.1	SEPT13		ILMN_3239164	0002350110	S	1846	CCTTCCAACTCAAGTAGCAACATAACCTCCTCCCTGCGGCTCTAGCCTGC	7	-	45763727-45763776	7p13b	Homo sapiens septin 13 (SEPT13), non-coding RNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	XM_927584.1	ILMN_42240	LOC644444	XM_927584.2	XM_927584.2		644444	113414592	XM_927584.2	LOC644444	XP_932677.2	ILMN_1693655	0002710048	S	136	TGCCTTTGTATGGGCATCATCCTTATATTGTCTGCAAGGAGCACTCAGGA	3	+	101387356-101387405	3q12.1c	PREDICTED: Homo sapiens similar to transmembrane protein 30A (LOC644444), mRNA.					
Homo sapiens	RefSeq	XR_016140.2	ILMN_176550	LOC92755	XR_016140.2	XR_016140.2		92755	169172927	XR_016140.2	LOC92755		ILMN_3304898	0002140400	M	712	ATCGAGTCCTACAATGCTACCCTCTCCGTCCATCAGTTGGTAGAGAACAC	8	+	30329603-30329652	8p12e	PREDICTED: Homo sapiens misc_RNA (LOC92755), miscRNA.					
Homo sapiens	RefSeq	NM_002101.3	ILMN_17566	GYPC	NM_016815.2	NM_016815.2		2995	21614516	NM_016815.2	GYPC	NP_058131.1	ILMN_1682332	0007000577	A	594	CTTGATTCTTCCCGAGATAGCCACCTGGAAACACTAGGTGCCTGCCCAGG	2	+	127170296-127170345	2q14.3d	Homo sapiens glycophorin C (Gerbich blood group) (GYPC), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8219208] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2416746] [evidence TAS]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [pmid 16669616] [evidence IDA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 2416746] [evidence TAS]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 2416746] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 2416746] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16669616] [evidence IPI]	MGC126191; GE; CD236R; GYPD; CD236; GPC; MGC117309; MGC126192	MGC126191; GE; CD236R; GYPD; CD236; GPC; MGC117309; MGC126192
Homo sapiens	RefSeq	XM_940361.1	ILMN_17566	GYPC	NM_016815.2	NM_016815.2		2995	21614516	NM_016815.2	GYPC	NP_058131.1	ILMN_1668039	0007210398	A	769	GGGCAGTGCAGGACAACATCAGCTCACTGGCAGGAAAGTCCTTGTTGAGG	2	+	127170471-127170520	2q14.3d	Homo sapiens glycophorin C (Gerbich blood group) (GYPC), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8219208] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2416746] [evidence TAS]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [pmid 16669616] [evidence IDA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 2416746] [evidence TAS]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 2416746] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 2416746] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16669616] [evidence IPI]	MGC126191; GE; CD236R; GYPD; CD236; GPC; MGC117309; MGC126192	
Homo sapiens	RefSeq	NR_001545.1	ILMN_9065	TTTY15	NR_001545.1	NR_001545.1		64595	32563547	NR_001545.1	TTTY15		ILMN_2077896	0001300044	S	4725	TCTTGCCATGCAGCCCTTTTTATGGAGCAAGTCACAATACAGCAGCTTGC	Y	+	13313030-13313079	Yq11.21a	Homo sapiens testis-specific transcript, Y-linked 15 (TTTY15) on chromosome Y.				DKFZP434I143	DKFZP434I143
Homo sapiens	Unigene	Hs.565557	ILMN_118018	HS.565557	Hs.565557		Hs.565557		8907658	BE220340			ILMN_1825842	0002350609	S	384	aCTAAGCTTTTTAGTCTCCCAAAAAATGGAAAGTTTGTTTATTGTCCATT	2	-	55585404-55585453		hv71a07.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3178836 3, mRNA sequence					
Homo sapiens	RefSeq	NM_138467.1	ILMN_26975	TYW3	NM_138467.1	NM_138467.1		127253	42734380	NM_138467.1	TYW3	NP_612476.1	ILMN_1726842	0004010343	S	2267	AGGAAATTTGGGCAGGAAAGGGAACTCACAGTGTCGGAATGCCTGGAGCA	1	+	75003783-75003832	1p31.1h	Homo sapiens tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) (TYW3), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	C1orf171; FLJ40918	C1orf171; FLJ40918
Homo sapiens	RefSeq	XM_946222.1	ILMN_174364	PDZRN3	XM_001133042.1	XM_001133042.1		23024	113415101	XM_001133042.1	PDZRN3	XP_001133042.1	ILMN_1703511	0004050113	A	3580	CCACCCAACCCGGTGGTTAACGATTTAATACATATAACCAAACCGGCAGC				3p13b-p13a	PREDICTED: Homo sapiens PDZ domain containing RING finger 3 (PDZRN3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_015009.1	ILMN_174364	PDZRN3	XM_001133042.1	XM_001133042.1		23024	113415101	XM_001133042.1	PDZRN3	XP_001133042.1	ILMN_1742949	0000520082	I	791	TGAGGTCAACGGCAGAGACTTATCCAGAGCAACTCATGACCAGGCTGTGG				3p13b-p13a	PREDICTED: Homo sapiens PDZ domain containing RING finger 3 (PDZRN3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		SEMACAP3; LNX3
Homo sapiens	RefSeq	NM_015009.1	ILMN_174364	PDZRN3	XM_001133042.1	XM_001133042.1		23024	113415101	XM_001133042.1	PDZRN3	XP_001133042.1	ILMN_1699552	0003440681	A	3205	CAAACCCTACAACTCTGGGTGTCATAGGTCTATTTTAAGGGAAGAGAGAG				3p13b-p13a	PREDICTED: Homo sapiens PDZ domain containing RING finger 3 (PDZRN3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		SEMACAP3; LNX3
Homo sapiens	RefSeq	XM_001719129.1	ILMN_336344	LOC100133747	XM_001719129.1	XM_001719129.1		100133747	169205614	XM_001719129.1	LOC100133747	XP_001719181.1	ILMN_3236695	0002260500	S	120	CCAAGAGAATTCCGGAACCCAAACGGCTCGCTCAAAGCACTTTATTGGCA					PREDICTED: Homo sapiens hypothetical protein LOC100133747 (LOC100133747), mRNA.					
Homo sapiens	RefSeq	XM_935998.3	ILMN_35151	LOC641814	XM_935998.3	XM_935998.3		641814	169170658	XM_935998.3	LOC641814	XP_941091.1	ILMN_3243297	0006900608	S	154	TTGCAGCCGCAACCCTGTCATTGTCAGAGGAATTGGCAGGTATTCCCGAT	7	+	136752247-136752296		PREDICTED: Homo sapiens similar to Ribosomal protein L6, transcript variant 7 (LOC641814), mRNA.					
Homo sapiens	RefSeq	NR_024480.1	ILMN_370571	LOC100131551	NR_024480.1	NR_024480.1		100131551	213512111	NR_024480.1	LOC100131551		ILMN_3239475	0000360451	S	2838	CGGGATGTGTCACTTAACTTTGTTCCTTAAAGCTCCAGAAGCCCAAGGTC	3	-	194019114-194019163	3q29c	Homo sapiens hypothetical LOC100131551 (LOC100131551), non-coding RNA.					
Homo sapiens	RefSeq	NM_001037164.1	ILMN_7258	ARL4A	NM_001037164.1	NM_001037164.1		10124	81295812	NM_001037164.1	ARL4A	NP_001032241.1	ILMN_2369953	0001260364	A	2664	CCCTTCACTGATACTGAAATCATGGTATCTGCTGCAAACATGAGTAGATC	7	+	12696791-12696840	7p21.3a	Homo sapiens ADP-ribosylation factor-like 4A (ARL4A), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10462049] [evidence TAS]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10462049] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	ARL4	ARL4
Homo sapiens	RefSeq	NM_005738.2	ILMN_7258	ARL4A	NM_001037164.1	NM_001037164.1		10124	81295812	NM_001037164.1	ARL4A	NP_001032241.1	ILMN_1743241	0007560615	A	2600	GTCCCATAGTAGTTCAGATCTGCTTAGATGTGACAGGCATTGAAGGCTGT	7	+	12696727-12696776	7p21.3a	Homo sapiens ADP-ribosylation factor-like 4A (ARL4A), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10462049] [evidence TAS]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10462049] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	ARL4	ARL4A
Homo sapiens	RefSeq	NM_212460.1	ILMN_7258	ARL4A	NM_001037164.1	NM_001037164.1		10124	81295812	NM_001037164.1	ARL4A	NP_001032241.1	ILMN_1704842	0001010161	I	80	TCCTCTGCCATCGCCCACGCCTCCCTGGTGCCAGGGAACAGGTATCAGCG	7	+	12693085-12693134	7p21.3a	Homo sapiens ADP-ribosylation factor-like 4A (ARL4A), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10462049] [evidence TAS]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10462049] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	ARL4	ARL4A
Homo sapiens	RefSeq	XM_927886.1	ILMN_7258	ARL4A	NM_001037164.1	NM_001037164.1		10124	81295812	NM_001037164.1	ARL4A	NP_001032241.1	ILMN_1753663	0006290369	A	383	GTCTTATACAGGCTGCAGTTCAATGAATTTGTAAATACCGTACCTACCAA	7	+	12694510-12694559	7p21.3a	Homo sapiens ADP-ribosylation factor-like 4A (ARL4A), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10462049] [evidence TAS]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10462049] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	ARL4	
Homo sapiens	RefSeq	NM_153262.1	ILMN_12853	SYT14	NM_153262.1	NM_153262.1		255928	23397557	NM_153262.1	SYT14	NP_694994.1	ILMN_2181670	0004120259	S	941	ACAGAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACAG	1	+	208340192-208340241	1q32.2c	Homo sapiens synaptotagmin XIV (SYT14), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC163195; sytXIV; FLJ34198	MGC163195; sytXIV; FLJ34198
Homo sapiens	RefSeq	NM_203282.1	ILMN_14608	ZNF254	NM_203282.2	NM_203282.2		9534	116256448	NM_203282.2	ZNF254	NP_975011.3	ILMN_1657729	0002750762	S	3496	GTGTTCTTATGCCACTAACTTTAACCTATTCCCTTACTCAAGGATGTAGG	19	+	24104004-24104053	19p12b	Homo sapiens zinc finger protein 254 (ZNF254), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10585455] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZNF91L; BMZF-5; HD-ZNF1; ZNF539	
Homo sapiens	RefSeq	NM_006197.2	ILMN_14472	PCM1	NM_006197.3	NM_006197.3		5108	134142825	NM_006197.3	PCM1	NP_006188.3	ILMN_1690487	0001440259	S	6197	GGAAACTCCTGAAAGCTCTCTGGCTGGAAGTCCTGATACTGAATCTCCAG	8	+	17849013-17849062	8p22a	Homo sapiens pericentriolar material 1 (PCM1), mRNA.	A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [pmid 8120099] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8120099] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; An immotile primary cilium that may be missing the central pair of microtubules, or the central pair of microtubules and outer dynein arms. Some primary cilia also have altered arrangements of outer microtubules (fewer than nine and/or not always present as doublets). Nonmotile primary cilia typically function as sensory organelles that concentrate and organize sensory signaling molecules [goid 31513] [pmid 17574030] [evidence IDA]; A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; cetriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome [goid 34451] [pmid 17574030] [evidence IDA]	The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [pmid 17574030] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [pmid 14520415] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51297] [pmid 17574030] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15107855] [evidence IPI]	PTC4	PTC4
Homo sapiens	Unigene	Hs.543377	ILMN_106979	HS.543377	Hs.543377		Hs.543377		47299683	CN283269			ILMN_1822571	0005720435	S	76	CCGGCCGCCGTCCCAGGACTTTTATTTCAAATGTGACCTGTGTAGCAACC	4	-	166467854-166467903		17000424718959 GRN_ES Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NM_176885.1	ILMN_174302	TAS2R31	NM_176885.2	NM_176885.2		259290	116235453	NM_176885.2	TAS2R31	NP_795366.2	ILMN_1807759	0007100148	S	322	GCTTATAATGTCTGGGCAGTAACCGGCCATTTCAGCAACTGGCTTGCTAC	12	-	11183635-11183684	12p13.2b	Homo sapiens taste receptor, type 2, member 31 (TAS2R31), mRNA.				T2R53; T2R44	T2R53; T2R44
Homo sapiens	RefSeq	XM_001724243.1	ILMN_342013	LOC100130950	XM_001724243.1	XM_001724243.1		100130950	169211252	XM_001724243.1	LOC100130950	XP_001724295.1	ILMN_3261101	0007320154	M	335	CCTCCACCAGCTCATTGCAGTGGAATCCTGAGAAGAATGGAGAGAGAAGA				17p13.2b	PREDICTED: Homo sapiens similar to hCG1991536 (LOC100130950), mRNA.					
Homo sapiens	RefSeq	NM_022730.1	ILMN_1564	COPS7B	NM_022730.1	NM_022730.1		64708	12232384	NM_022730.1	COPS7B	NP_073567.1	ILMN_1784785	0004590661	S	1768	TGCCCCTCTGTCTGCTGAAGGACCTGTTGCTGCTTCTGTCTTTTCACCCC	2	+	232381469-232381518	2q37.1b	Homo sapiens COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis) (COPS7B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IEA]			FLJ12612; MGC111077	FLJ12612; MGC111077
Homo sapiens	RefSeq	XM_939010.1	ILMN_166985	LOC402100	XR_018182.1	XR_018182.1		402100	113413967	XR_018182.1	LOC402100		ILMN_1681069	0003800209	A	205	AGAAAATCAGTACGTTAAAGAGATATCTGGCTTTCTGCCTCCACTACTGC				2q13a	PREDICTED: Homo sapiens hypothetical LOC402100 (LOC402100), mRNA.					
Homo sapiens	RefSeq	XM_938971.1	ILMN_166985	LOC402100	XR_018182.1	XR_018182.1		402100	113413967	XR_018182.1	LOC402100		ILMN_1802542	0003610270	S	238	TCTGCCTCCACTACTGCCATGGTGCCCGCGAGAAAGCTTGTGGAGAAGGC				2q13a	PREDICTED: Homo sapiens hypothetical LOC402100 (LOC402100), mRNA.					
Homo sapiens	RefSeq	XM_925893.1	ILMN_37332	LOC642365	XM_925893.1	XM_925893.1		642365	88953740	XM_925893.1	LOC642365	XP_930986.1	ILMN_1667650	0004390025	S	4	GGCTCCTGCCTGGCCGAGCCTCCCCGACGAGAGCACTGCTCCCAGCTCCA	2	-	150735900-150735949		PREDICTED: Homo sapiens hypothetical protein LOC642365 (LOC642365), mRNA.					
Homo sapiens	RefSeq	XM_941750.1	ILMN_41290	LOC652326	XM_941750.1	XM_941750.1		652326	89071218	XM_941750.1	LOC652326	XP_946843.1	ILMN_1692628	0005560673	S	220	ACAGAGAGGTCCCTGAAGAGGGCCCGGGAGAGGGGGGTGTTCCAAGTCAT					PREDICTED: Homo sapiens similar to rhophilin-like protein (LOC652326), mRNA.					
Homo sapiens	RefSeq	NM_001040433.1	ILMN_170738	SPINK9	NM_001040433.1	NM_001040433.1		643394	94536773	NM_001040433.1	SPINK9	NP_001035523.1	ILMN_2045351	0004640278	S	2	GACACCAGGTCACTTCTTTTCCCTACATCTGACTGCCTTGGCCACTTCAG	5	+	147695316-147695365	5q33.1a	Homo sapiens serine peptidase inhibitor, Kazal type 9 (SPINK9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	LEKTI2	LEKTI2
Homo sapiens	RefSeq	XM_926728.1	ILMN_170738	SPINK9	NM_001040433.1	NM_001040433.1		643394	94536773	NM_001040433.1	SPINK9	NP_001035523.1	ILMN_1653428	0002630142	S	7	CAGGTCACTTCTTTTCCCTACATCTGACTGCCTTGGCCACTTCAGTACTA	5	+	147695321-147695369:147695370-147695370	5q33.1a	Homo sapiens serine peptidase inhibitor, Kazal type 9 (SPINK9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	LEKTI2	
Homo sapiens	RefSeq	NM_002956.2	ILMN_15054	CLIP1	NM_002956.2	NM_002956.2		6249	38016917	NM_002956.2	CLIP1	NP_002947.1	ILMN_1684038	0003390026	A	5015	GAAGCAGGTAAAGGGAGGGGCAAGCCCCCAAACTGCTGTGGGGACATTTT	12	-	122756796-122756845	12q24.31c	Homo sapiens CAP-GLY domain containing linker protein 1 (CLIP1), transcript variant 1, mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 15928712] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 1356075] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 1600942] [evidence TAS]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 15928712] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11940666] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 10052454] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15928712] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [pmid 15928712] [evidence NAS]	CYLN1; RSN; MGC131604; CLIP-170; CLIP170; CLIP1; CLIP	CYLN1; MGC131604; RSN; CLIP-170; CLIP170; CLIP1; CLIP
Homo sapiens	RefSeq	NM_002956.2	ILMN_15054	CLIP1	NM_002956.2	NM_002956.2		6249	38016917	NM_002956.2	CLIP1	NP_002947.1	ILMN_1723058	0006110427	I	1525	CGCAGACCAAACTGGAGCATGCCCGCATTAAGGAGCTTGAACAGAGCCTG	12	-	122831975-122832024	12q24.31c	Homo sapiens CAP-GLY domain containing linker protein 1 (CLIP1), transcript variant 1, mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 15928712] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 1356075] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 1600942] [evidence TAS]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 15928712] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11940666] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 10052454] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15928712] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [pmid 15928712] [evidence NAS]	CYLN1; RSN; MGC131604; CLIP-170; CLIP170; CLIP1; CLIP	CYLN1; MGC131604; RSN; CLIP-170; CLIP170; CLIP1; CLIP
Homo sapiens	RefSeq	XM_001126620.2	ILMN_172527	LOC727869	XM_001126620.2	XM_001126620.2		727869	169202012	XM_001126620.2	LOC727869	XP_001126620.1	ILMN_3203622	0004760612	A	547	GCTGAGAGGCTGAGCTTGCCAGCTCCATTTCTGACTGCTCATGGAGCAGA	11	+	101837409-101837458	11q22.2a	PREDICTED: Homo sapiens hypothetical LOC727869 (LOC727869), mRNA.					
Homo sapiens	RefSeq	NM_020345.3	ILMN_28229	NKIRAS1	NM_020345.3	NM_020345.3		28512	50593013	NM_020345.3	NKIRAS1	NP_065078.1	ILMN_1664216	0004150630	S	1607	CCGTTTTTTCCTTAGCCAGACCCCTGTTGATAGACCAGATACTTGAGGGC	3	-	23933910-23933959	3p24.2b	Homo sapiens NFKB inhibitor interacting Ras-like 1 (NKIRAS1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 10657303] [evidence NAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10657303] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	KBRAS1; kappaB-Ras1	KBRAS1; kappaB-Ras1
Homo sapiens	RefSeq	NM_004997.2	ILMN_18710	MYBPH	NM_004997.2	NM_004997.2		4608	55956913	NM_004997.2	MYBPH	NP_004988.2	ILMN_1705297	0006860465	S	1695	GGCCAGACTAACTGGGCTCAAGGGGTGCTGGAAGGCGCAGAGATTGGAGT	1	-	203137000-203137049	1q32.1e	Homo sapiens myosin binding protein H (MYBPH), mRNA.	Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	Any process that modulates the frequency, rate or extent of striated muscle contraction [goid 6942] [pmid 8486381] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8486381] [evidence TAS]		
Homo sapiens	RefSeq	NM_000737.2	ILMN_170507	CGB	NM_000737.2	NM_000737.2		1082	15451751	NM_000737.2	CGB	NP_000728.1	ILMN_2153029	0006860446	S	329	ATAAAGCCAGGTACACGAGGCAGGGGACGCACCAAGGATGGAGATGTTCC	19	-	54219027-54219040:54219041-54219076	19q13.33a	Homo sapiens chorionic gonadotropin, beta polypeptide (CGB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 6194155] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 7723844] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10468638] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 6194155] [evidence TAS]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [pmid 10468638] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 6690982] [evidence TAS]	hCGB; CGB3	hCGB; CGB3
Homo sapiens	RefSeq	NM_004825.2	ILMN_13765	CDY2A	NM_004825.2	NM_004825.2		9426	25453482	NM_004825.2	CDY2A	NP_004816.1	ILMN_2090029	0005360066	S	92	CATGCACCATGAGACAAAGCCCAAGCTGTCCCACCAGGCAGTAAGTGTGG	Y	+	18647152-18647201	Yq11.221f	Homo sapiens chromodomain protein, Y-linked, 2A (CDY2A), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9381176] [evidence TAS]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CDY2; CDY	CDY2; CDY
Homo sapiens	RefSeq	NM_001001697.1	ILMN_13580	FLJ41821	NM_001001697.1	NM_001001697.1		401011	48717400	NM_001001697.1	FLJ41821	NP_001001697.1	ILMN_1663052	0004150612	S	213	AGCTGGCTTCACCTCTCACTGGCACTGGCTGCAGGACTTCGCCGCACCTA	2	-	132440720-132440769	2q21.2a	Homo sapiens FLJ41821 protein (FLJ41821), mRNA.					
Homo sapiens	RefSeq	NM_181780.2	ILMN_5713	BTLA	NM_181780.3	NM_181780.3		151888	145580620	NM_181780.3	BTLA	NP_861445.3	ILMN_1778536	0002450494	S	686	GGGGGGATTGCCTCTACTCATCACTACCTGTTTCTGCCTGTTCTGCTGCC	3	-	113672763-113672812	3q13.2a	Homo sapiens B and T lymphocyte associated (BTLA), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD272; BTLA1; MGC129743; FLJ16065	CD272; BTLA1; MGC129743; FLJ16065
Homo sapiens	Unigene	Hs.569104	ILMN_121285	HS.569104	Hs.569104		Hs.569104		46266520	BX337332			ILMN_1906437	0005550458	S	440	gaaCAGCTTGGAGTCATGTTTACATCTAGTTCTACTGACCGGTTCCCATC	12	-	52759207-52759256		BX337332 Homo sapiens PLACENTA COT 25-NORMALIZED Homo sapiens cDNA clone CS0DI040YE21 5-PRIME, mRNA sequence					
Homo sapiens	RefSeq	XM_938887.1	ILMN_168976	KLF11	XM_001129527.1	XM_001129527.1		8462	113413686	XM_001129527.1	KLF11	XP_001129527.1	ILMN_1782983	0005870673	I	4453	GTGTGTCCTGTGTCATTTAACTGTACCTGGTGGCCTAAGTATACCTAGAG				2p25.1d	PREDICTED: Homo sapiens Kruppel-like factor 11 (KLF11), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9748269] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9748269] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9748269] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9748269] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_938887.1	ILMN_168976	KLF11	XM_001129527.1	XM_001129527.1		8462	113413686	XM_001129527.1	KLF11	XP_001129527.1	ILMN_1751656	0005700088	A	4250	AGGTGGGCTCCCCTCGTGCACTTTATTGCCTGGGCAGTTTTGCTTGATCT				2p25.1d	PREDICTED: Homo sapiens Kruppel-like factor 11 (KLF11), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9748269] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9748269] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9748269] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9748269] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_003597.4	ILMN_168976	KLF11	XM_001129527.1	XM_001129527.1		8462	113413686	XM_001129527.1	KLF11	XP_001129527.1	ILMN_1673207	0003360731	A	4174	GAGAACCACAAACCTTGTGTATGGATTCGGCATGGAGCCCTCAGCTGGCG				2p25.1d	PREDICTED: Homo sapiens Kruppel-like factor 11 (KLF11), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9748269] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9748269] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9748269] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9748269] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		TIEG2; MODY7; FKLF1; Tieg3; FKLF
Homo sapiens	RefSeq	NM_001679.2	ILMN_163124	ATP1B3	XM_001133534.1	XM_001133534.1		483	113415255	XM_001133534.1	ATP1B3	XP_001133534.1	ILMN_1759628	0004220632	A	1252	CCCGGCCAACATCAAGTGACTTTATAGCTGCAAGAAATGTGGTATGTGGA				3q23c	PREDICTED: Homo sapiens ATPase, Na+/K+ transporting, beta 3 polypeptide, transcript variant 2 (ATP1B3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Sodium:potassium-exchanging ATPases are tetrameric proteins, consisting of two large alpha subunits and two smaller beta subunits. The alpha subunits bear the active site and penetrate the membrane, while the beta subunits carry oligosaccharide groups and face the cell exterior [goid 5890] [pmid 8798450] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [pmid 8798450] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		ATPB-3; CD298; FLJ29027
Homo sapiens	RefSeq	XM_945505.1	ILMN_163124	ATP1B3	XM_001133534.1	XM_001133534.1		483	113415255	XM_001133534.1	ATP1B3	XP_001133534.1	ILMN_1783304	0001510088	A	1248	GGTACCCGGCCAACATCAAGTGACTTTATAGCTGCAAGAAATGTGGTATG				3q23c	PREDICTED: Homo sapiens ATPase, Na+/K+ transporting, beta 3 polypeptide, transcript variant 2 (ATP1B3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Sodium:potassium-exchanging ATPases are tetrameric proteins, consisting of two large alpha subunits and two smaller beta subunits. The alpha subunits bear the active site and penetrate the membrane, while the beta subunits carry oligosaccharide groups and face the cell exterior [goid 5890] [pmid 8798450] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [pmid 8798450] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Homo sapiens	RefSeq	XM_941687.1	ILMN_36016	LOC652274	XM_941687.1	XM_941687.1		652274	89062586	XM_941687.1	LOC652274	XP_946780.1	ILMN_1677353	0002750440	S	242	CCGACGTCTTCCTTATATGCTTCTCGGTGGAACTCAGATTGATCTCCGAG					PREDICTED: Homo sapiens similar to ras homolog gene family, member Q (LOC652274), mRNA.					
Homo sapiens	RefSeq	NM_022343.2	ILMN_12810	GLIPR2	NM_022343.2	NM_022343.2		152007	22095361	NM_022343.2	GLIPR2	NP_071738.1	ILMN_1652631	0000830278	S	1778	GCAGCTCCTGAAGGTCTGTGTTGCACTGTCACCAGTCTCAAGCTATGCCT	9	+	36153460-36153509	9p13.3a	Homo sapiens GLI pathogenesis-related 2 (GLIPR2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			GLIPR2; GAPR-1	GLIPR2; GAPR-1
Homo sapiens	RefSeq	XM_930111.1	ILMN_168984	LOC730740	XM_001128558.1	XM_001128558.1		730740	113416273	XM_001128558.1	LOC730740	XP_001128558.1	ILMN_1748767	0006980685	S	228	TGTGGCGCTCCGTGAAATTAGACGTTATCAGAAGTCCACTGAACTTCTGG					PREDICTED: Homo sapiens similar to H3 histone, family 3B (LOC730740), mRNA.					
Homo sapiens	RefSeq	NM_025027.3	ILMN_17357	ZNF606	NM_025027.3	NM_025027.3		80095	71480165	NM_025027.3	ZNF606	NP_079303.2	ILMN_1681829	0000770484	S	4050	GGATCCTACCTAAGGGGCACAACTAGTAAGGGAGTAGAGCTGAGATTGGC	19	-	63180378-63180427	19q13.43c	Homo sapiens zinc finger protein 606 (ZNF606), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1852; FLJ14260; ZNF328	KIAA1852; FLJ14260; ZNF328
Homo sapiens	RefSeq	NM_024955.4	ILMN_165686	FOXRED2	NM_024955.4	NM_024955.4		80020	34303916	NM_024955.4	FOXRED2	NP_079231.3	ILMN_2130635	0000160181	S	3870	GCCTAGGTGACAAAGCAAGACCCACAGTAAAGCCCCCACACCCCATCTCA	22	-	35214248-35214297	22q12.3d	Homo sapiens FAD-dependent oxidoreductase domain containing 2 (FOXRED2), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ33734; FLJ23322	FLJ33734; FLJ23322
Homo sapiens	RefSeq	NM_024955.4	ILMN_165686	FOXRED2	NM_024955.4	NM_024955.4		80020	34303916	NM_024955.4	FOXRED2	NP_079231.3	ILMN_1772957	0006180487	S	3137	GTTCCTAGTCTCTTCTTCATTGCCCTTCCTCACCAGCAATCTGCACTTTC	22	-	35214981-35215030	22q12.3d	Homo sapiens FAD-dependent oxidoreductase domain containing 2 (FOXRED2), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ33734; FLJ23322	
Homo sapiens	RefSeq	NM_022447.1	ILMN_167231	PAPD5	NM_001040285.1	NM_001040285.1		64282	94536831	NM_001040285.1	PAPD5	NP_001035375.1	ILMN_1710571	0000520017	S	1496	GTGCAATGATCTCATGCTCAGGACAGTTGCGCAGGGACTCCTGGGAGATA	16	+	48820770-48820819	16q12.1c	Homo sapiens PAP associated domain containing 5 (PAPD5), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	FLJ40270; TRF4-2	TRF4-2
Homo sapiens	RefSeq	NM_005102.2	ILMN_4341	FEZ2	NM_005102.2	NM_005102.2		9637	110349753	NM_005102.2	FEZ2	NP_005093.2	ILMN_2403946	0000360608	A	1660	CTGTTGGTGGTGATGGATTTTGTAGCTTGCTGCTTGTTTCACCACTGGTC	2	-	36779705-36779754	2p22.2b	Homo sapiens fasciculation and elongation protein zeta 2 (zygin II) (FEZ2), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9096408] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9096408] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9096408] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14690447] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC117372; HUM3CL	HUM3CL
Homo sapiens	RefSeq	NM_005102.1	ILMN_4341	FEZ2	NM_005102.2	NM_005102.2		9637	110349753	NM_005102.2	FEZ2	NP_005093.2	ILMN_1739586	0006200053	S	1810	AGTGTGTGTCCTCTGAGGTGCTTGAGAAAGTGTACACTGCAGAACTGCCC	2	-	36779555-36779604	2p22.2b	Homo sapiens fasciculation and elongation protein zeta 2 (zygin II) (FEZ2), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9096408] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9096408] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9096408] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14690447] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC117372; HUM3CL	HUM3CL
Homo sapiens	RefSeq	NM_002764.2	ILMN_161881	PRPS1	NM_002764.2	NM_002764.2		5631	19923737	NM_002764.2	PRPS1	NP_002755.1	ILMN_1667050	0004780521	S	1629	GGGAGGAAGAAGCCTGATCCATCACCATCTGCTTGACTATGTAGCTTGGA	X	+	106780490-106780539	Xq22.3b	Homo sapiens phosphoribosyl pyrophosphate synthetase 1 (PRPS1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 4328836] [evidence EXP]	The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways involving purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 6144] [pmid 8253776] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8253776] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9156] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells [goid 44249] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [pmid 16939420] [evidence IDA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [pmid 17701900] [evidence IDA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [pmid 4328836] [evidence EXP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16939420] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16939420] [evidence IPI]	PRSI; KIAA0967; PRS I	PRSI; KIAA0967; PRS I
Homo sapiens	RefSeq	XR_019416.2	ILMN_173709	LOC285741	XR_019416.2	XR_019416.2		285741	169168808	XR_019416.2	LOC285741		ILMN_3284404	0003460300	M	148	GGTAATACCTCCGCTGAATGACCCTAGGGCGAAGGTACAGAAAGCACAGT				6q24.2b	PREDICTED: Homo sapiens misc_RNA (LOC285741), miscRNA.					
Homo sapiens	RefSeq	NM_013256.1	ILMN_24372	ZNF180	NM_013256.1	NM_013256.1		7733	7019578	NM_013256.1	ZNF180	NP_037388.1	ILMN_1707095	0003840494	S	2631	CCTGAATCAGAGAAAATCATATGCCAAAGCCAACTGCCAGTGCTAGACTC	19	-	49672120-49672169	19q13.31b	Homo sapiens zinc finger protein 180 (ZNF180), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HHZ168	HHZ168
Homo sapiens	RefSeq	XM_926068.1	ILMN_6264	EPPK1	NM_031308.1	NM_031308.1		83481	13876385	NM_031308.1	EPPK1	NP_112598.2	ILMN_1706708	0003170086	S	131	GCCAGGAGCATAGCTGGGGTGTATGTGGAGGCCTCGGGCCAGGCCCAGAG	8	-	145019242-145019291	8q24.3g	Homo sapiens epiplakin 1 (EPPK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	EPIPL; EPIPL1	
Homo sapiens	RefSeq	NM_017968.2	ILMN_20687	SLTM	NM_024755.2	NM_024755.2		79811	63176610	NM_024755.2	SLTM	NP_079031.2	ILMN_1742224	0001570291	A	3879	CCTTGGCCATGAGGTTTGTTTCACAAGGTTCTTAGACCGAGTTGTGCAGG	15	-	59171462-59171511	15q22.1b	Homo sapiens SAFB-like, transcription modulator (SLTM), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	DKFZp762G052; FLJ13213; Met; FLJ10005	DKFZp762G052; FLJ13213; Met; FLJ10005
Homo sapiens	RefSeq	NM_024755.2	ILMN_20687	SLTM	NM_024755.2	NM_024755.2		79811	63176610	NM_024755.2	SLTM	NP_079031.2	ILMN_1718815	0006620494	I	680	ATAGCAGGTTCTGGTGATGGTACACAAGAAGTATCTAAACCTCTTCCTTC	15	-	59192084-59192133	15q22.1b	Homo sapiens SAFB-like, transcription modulator (SLTM), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	DKFZp762G052; FLJ13213; Met; FLJ10005	DKFZp762G052; FLJ13213; Met; FLJ10005
Homo sapiens	RefSeq	NM_001463.2	ILMN_29091	FRZB	NM_001463.2	NM_001463.2		2487	38455387	NM_001463.2	FRZB	NP_001454.2	ILMN_1716246	0003370113	S	1840	GCCTGATTGAGAAGCACAACTGAAACCAGTAGCCGCTGGGGTGTTAATGG	2	-	183698882-183698931	2q32.1a	Homo sapiens frizzled-related protein (FRZB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9096311] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8824257] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8824257] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence ISS]	Interacting selectively with Wnt-protein, a secreted growth factor involved in signaling [goid 17147] [evidence ISS]	FRZB-1; FRZB-PEN; SRFP3; FRP-3; FZRB; hFIZ; FRITZ; SFRP3; FRE; FRZB1	FRZB-1; FRZB-PEN; SRFP3; FRP-3; FZRB; hFIZ; FRITZ; SFRP3; FRE; FRZB1
Homo sapiens	RefSeq	NM_153217.1	ILMN_19933	TMEM174	NM_153217.1	NM_153217.1		134288	23397474	NM_153217.1	TMEM174	NP_694949.1	ILMN_1776263	0006350719	S	1167	TGGGAGTTTCCACAGAGGTGAGAGTCGGGTGGGAAGGAAGCAGGGAAGAG	5	+	72506140-72506189	5q13.2c	Homo sapiens transmembrane protein 174 (TMEM174), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ31268; MGC13034	FLJ31268; MGC13034
Homo sapiens	RefSeq	NM_006283.1	ILMN_20678	TACC1	NM_006283.1	NM_006283.1		6867	5454099	NM_006283.1	TACC1	NP_006274.1	ILMN_1770084	0002940373	S	7474	CATCTGCTTCCACTGTGTTCCCACGGGTGCCATGAAGTGTGTGAGGAGCC	8	+	38829434-38829483	8p11.23c	Homo sapiens transforming, acidic coiled-coil containing protein 1 (TACC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14603251] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12165861] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11903063] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12165861] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14603251] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15064709] [evidence IPI]	DKFZp686K18126; Ga55; KIAA1103	DKFZp686K18126; Ga55; KIAA1103
Homo sapiens	RefSeq	NM_172070.3	ILMN_16633	UBR3	NM_172070.3	NM_172070.3		130507	160948609	NM_172070.3	UBR3	NP_742067.3	ILMN_3242176	0000940445	S	5475	CATTCGAGGTCACCGCTTCTGCCTCTGGGGTTCCGTGTATTTGGATGCTC	2	+	170937120-170937169	2q31.1b	Homo sapiens ubiquitin protein ligase E3 component n-recognin 3 (putative) (UBR3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IEA]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence ISS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence ISS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence ISS]; The actions or reactions of an organism in response to an odor [goid 42048] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126489; FLJ37422; ZNF650; DKFZp434P117; DKFZp686N10185; KIAA2024	MGC126489; FLJ37422; DKFZp434P117; DKFZp686N10185; KIAA2024
Homo sapiens	RefSeq	NM_000112.2	ILMN_169714	SLC26A2	NM_000112.3	NM_000112.3		1836	100913029	NM_000112.3	SLC26A2	NP_000103.2	ILMN_1801491	0003140102	S	7892	GGGATGAGGATGAGTTATTAATGTATTGCAGCCTACTGGAAAGGAGGGGG	5	+	149346730-149346779	5q33.1c	Homo sapiens solute carrier family 26 (sulfate transporter), member 2 (SLC26A2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8528239] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8528239] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [pmid 7923357] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	DTDST; MSTP157; MST153; D5S1708; DTD; EDM4	DTDST; MSTP157; MST153; D5S1708; DTD; EDM4
Homo sapiens	RefSeq	XM_942573.1	ILMN_45108	FLJ40292	NM_001039765.1	NM_001039765.1		643210	89886204	NM_001039765.1	FLJ40292	NP_001034854.1	ILMN_1707318	0001850390	S	1025	CTAGAGTGTTCCCCGTTTCTCCTGATGCTTCTGGTCCAGGGACCACACTT	9	+	139778319-139778368	9q34.3g	Homo sapiens hypothetical protein LOC643210 (FLJ40292), mRNA.				FLJ46107	
Homo sapiens	RefSeq	XM_001716724.1	ILMN_351015	LOC728711	XM_001716724.1	XM_001716724.1		728711	169168299	XM_001716724.1	LOC728711	XP_001716776.1	ILMN_3229203	0002710438	A	346	CTGGGTGGGCACCATCTAATCAGCTGCCAGTGTGGCCAGAATAAAGCAGG				5q23.1e	PREDICTED: Homo sapiens similar to hCG2041004 (LOC728711), mRNA.					
Homo sapiens	RefSeq	XM_001725735.1	ILMN_350541	LOC100128935	XM_001725735.1	XM_001725735.1		100128935	169169646	XM_001725735.1	LOC100128935	XP_001725787.1	ILMN_3194493	0003420315	A	76	AACTCCGTTGTCAGAGGGATGGTGGCAGACCCCGTTGTCAGAGGGCTGGT	6	+	44549842-44549891	6p21.1b	PREDICTED: Homo sapiens similar to hCG2041342 (LOC100128935), mRNA.					
Homo sapiens	RefSeq	XM_928484.1	ILMN_42316	LOC645451	XM_928484.1	XM_928484.1		645451	88982454	XM_928484.1	LOC645451	XP_933577.1	ILMN_1746857	0002970446	S	46	TATCCTTGTGATATGAGCCATGCTGGCAGCCTGAAGCCTGCACGAGAGGC	5	-	7353046-7353095		PREDICTED: Homo sapiens similar to Golgi autoantigen, golgin subfamily A member 2 (Golgi matrix protein GM130) (LOC645451), mRNA.					
Homo sapiens	RefSeq	NM_144770.2	ILMN_28213	RBM11	NM_144770.2	NM_144770.2		54033	48762928	NM_144770.2	RBM11	NP_658983.2	ILMN_1651712	0001740521	S	1258	GGCTGGGATTCAATGTGGAGTGGTGGATTTCCTGAAAGAAAGTAGTGCAG	21	+	14521858-14521907	21q11.2c	Homo sapiens RNA binding motif protein 11 (RBM11), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	NM_144770.2	ILMN_28213	RBM11	NM_144770.2	NM_144770.2		54033	48762928	NM_144770.2	RBM11	NP_658983.2	ILMN_2069060	0007210278	S	457	CTCTTTCAGAAGATGCAGTGGCATGTGTATAATCCAGTGCTGCAGCTTCC	21	+	14518715-14518729:14521072-14521106	21q11.2c	Homo sapiens RNA binding motif protein 11 (RBM11), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	NM_000099.2	ILMN_15664	CST3	NM_000099.2	NM_000099.2		1471	19882253	NM_000099.2	CST3	NP_000090.1	ILMN_1800354	0006450543	S	465	GCCTTGGCAGGGCACAATGACCTTGTCGAAATCCACCTGTCAGGACGCCT	20	-	23614554-23614603	20p11.21b	Homo sapiens cystatin C (CST3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 18613859] [evidence IDA]	The reorganization or renovation of existing blood vessels [goid 1974] [pmid 10545518] [evidence IEP]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 6203523] [evidence IDA]; The breakdown of tissues; usually, if not always, accompanied by cell death [goid 7559] [pmid 7890620] [evidence IC ]; Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins [goid 10466] [pmid 6203523] [evidence IDA]; Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins [goid 10466] [pmid 7890620] [evidence IDA]; A process that results in the breakdown of the extracellular matrix [goid 22617] [pmid 10545518] [evidence IEP]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [pmid 10545518] [evidence IEP]; Any process that modulates the frequency, rate, or extent of tissue remodeling [goid 34103] [pmid 10545518] [evidence IEP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [pmid 18026102] [evidence IGI]; The chemical reactions and pathways involving elastin, a glycoprotein which is randomly coiled and cross linked to form elastic fibres that are found in connective tissue [goid 51541] [pmid 10545518] [evidence IMP]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 18026102] [evidence IPI]; Interacting selectively with any protease or peptidase [goid 2020] [pmid 6203523] [evidence IPI]; Interacting selectively with any protease or peptidase [goid 2020] [pmid 7890620] [evidence IPI]; Interacting selectively with any protease or peptidase [goid 2020] [pmid 6203523] [evidence IPI];  [goid 4869] [evidence IEA]	MGC117328	MGC117328
Homo sapiens	RefSeq	NR_031750.1	ILMN_388672	MIR2116	NR_031750.1	NR_031750.1		100313886	269847722	NR_031750.1	MIR2116		ILMN_3310035	0002750634	S	13	GGTTCTTAGCATAGGAGGTCTTCCCATGCTAAGAAGTCCTCCCATGCCAA					Homo sapiens microRNA 2116 (MIR2116), microRNA.					
Homo sapiens	RefSeq	XR_039547.1	ILMN_350605	LOC728678	XR_039547.1	XR_039547.1		728678	169165406	XR_039547.1	LOC728678		ILMN_3305628	0005340349	M	2986	GTCGGGTTACCCACGAGGGGAAGCCCATCAGACTAACAGCTGCTCTCTCA				3p22.3c	PREDICTED: Homo sapiens misc_RNA (LOC728678), miscRNA.					
Homo sapiens	Unigene	Hs.583022	ILMN_135203	HS.583022	Hs.583022		Hs.583022		2054565	AA400694			ILMN_1891927	0001850131	S	179	ACGAGTGACAGCTATTCTGCCCCCAGAGACTGCCTCACACCCCTCAACCA	6	+	117976221-117976270		zu70f09.r1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:743369 5, mRNA sequence					
Homo sapiens	RefSeq	XM_928499.1	ILMN_41760	LOC653632	XM_928499.1	XM_928499.1		653632	88953874	XM_928499.1	LOC653632	XP_933592.1	ILMN_1697405	0002510050	S	61	GACGACCCCCGAGTGGGCCCGGATGCCGCCGGGGACTGCGTGACGGCGGC	2	+	198378129-198378178		PREDICTED: Homo sapiens similar to 130kDa-Ins(1,4,5)P3 binding protein (LOC653632), mRNA.					
Homo sapiens	RefSeq	XM_936687.1	ILMN_138276	MGC39900	XM_936687.1	XM_936687.1		286527	89060945	XM_936687.1	MGC39900	XP_941780.1	ILMN_1740512	0002000154	I	1680	ACCTTGCCATGGATGACCTTTGTGTAGGTAGTCCTTGCACCTCATGCAGG				Xq22.2b	PREDICTED: Homo sapiens hypothetical protein MGC39900 (MGC39900), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Homo sapiens	RefSeq	XM_932381.1	ILMN_18227	MMGT1	NM_173470.1	NM_173470.1		93380	27735036	NM_173470.1	MMGT1	NP_775741.1	ILMN_1655892	0007560246	S	106	ACGGAAAAAGGTCCGCGAGAACCCACGAACCTGCGCTATGGAGGCCTCTC	X	-	135055979-135056028	Xq26.3b	Homo sapiens membrane magnesium transporter 1 (MMGT1), mRNA.					
Homo sapiens	RefSeq	NM_173470.1	ILMN_18227	MMGT1	NM_173470.1	NM_173470.1		93380	27735036	NM_173470.1	MMGT1	NP_775741.1	ILMN_3237986	0000240577	S	3341	GGAACGACTCACTTAATAACCAGGGAACCAGCCAAATACTGTGCAGCCGC	X	-	135044488-135044537	Xq26.3b	Homo sapiens membrane magnesium transporter 1 (MMGT1), mRNA.					
Homo sapiens	RefSeq	NM_173470.1	ILMN_18227	MMGT1	NM_173470.1	NM_173470.1		93380	27735036	NM_173470.1	MMGT1	NP_775741.1	ILMN_1776216	0006020445	S	3456	GCATTGTGGCTTCTCAGTGGCTTGACAGCATCTTCCTGGTTGTATGTGGC	X	-	135044373-135044422	Xq26.3b	Homo sapiens membrane magnesium transporter 1 (MMGT1), mRNA.					
Homo sapiens	RefSeq	NM_016053.1	ILMN_25394	CCDC53	NM_016053.2	NM_016053.2		51019	134254436	NM_016053.2	CCDC53	NP_057137.1	ILMN_1715569	0007040544	S	637	GGACTAGACCCAGATCTTCTTGAGAGGCCAGATGCTCCAGTGCCTGATGG	12	-	102406943-102406970:102419752-102419773	12q23.2a	Homo sapiens coiled-coil domain containing 53 (CCDC53), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CGI-116	CGI-116
Homo sapiens	RefSeq	NM_001310.2	ILMN_21772	CREBL2	NM_001310.2	NM_001310.2		1389	21536277	NM_001310.2	CREBL2	NP_001301.1	ILMN_1660223	0006220377	S	3623	CAGCCTGCTTTCTCATCTGTAAAAAAGGGGGGAGGATAACTTTCACAGGG	12	+	12689183-12689232	12p13.1b	Homo sapiens cAMP responsive element binding protein-like 2 (CREBL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9693048] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 9693048] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9693048] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9693048] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC138362; MGC117311	MGC138362; MGC117311
Homo sapiens	RefSeq	XM_001714684.1	ILMN_342086	LOC728318	XM_001714684.1	XM_001714684.1		728318	169212029	XM_001714684.1	LOC728318	XP_001714736.1	ILMN_3224662	0004200278	A	168	CTGTCAAAACACCTGCTGCAGGACCACCTGCTGCCAGCCCACTTGTGTGG				17q21.2a	PREDICTED: Homo sapiens hypothetical LOC728318 (LOC728318), mRNA.					
Homo sapiens	RefSeq	NM_177442.1	ILMN_22270	FTSJ2	NM_177442.1	NM_177442.1		29960	29294652	NM_177442.1	FTSJ2	NP_803191.1	ILMN_1735918	0001710162	I	1196	AGAAATGGAATGCTGGCCCCCTGGATCTGCACATCTGCCTCGCTGCTGGT	7	-	2244180-2244229	7p22.2c	Homo sapiens FtsJ homolog 2 (E. coli) (FTSJ2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule [goid 8173] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FJH1; DKFZp686J14194	FJH1; DKFZp686J14194
Homo sapiens	RefSeq	XM_001715425.1	ILMN_336685	LOC100134252	XM_001715425.1	XM_001715425.1		100134252	169167077	XM_001715425.1	LOC100134252	XP_001715477.1	ILMN_3237094	0000380719	S	812	AGGCCAAGCTCATGCTTCACAAGGGCCTTTCCAGGCCCAACTTTCGTCTC					PREDICTED: Homo sapiens hypothetical protein LOC100134252 (LOC100134252), mRNA.					
Homo sapiens	RefSeq	XR_000982.1	ILMN_46168	MGC45922	XR_000982.1	XR_000982.1		284365	89056894	XR_000982.1	MGC45922		ILMN_1787731	0006040681	I	195	TCCTACCTAAGCCCAGTGGGCATGTGAAGCAGAGGGCAGCCCTTGAATGC	19	+	56013211-56013260	19q13.33c	PREDICTED: Homo sapiens hypothetical gene MGC45922 (MGC45922), misc RNA.					
Homo sapiens	RefSeq	NM_002872.3	ILMN_26813	RAC2	NM_002872.3	NM_002872.3		5880	27881480	NM_002872.3	RAC2	NP_002863.1	ILMN_1709795	0000110382	S	1263	GGGGATATCTGCTCAGCCAATGGAAAATCTGGGTTCAACCAGCCCCTGCC	22	-	37621465-37621514	22q13.1a	Homo sapiens ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) (RAC2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2674130] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions involving hydrogen peroxide [goid 10310] [pmid 16636067] [evidence TAS]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Any process that modulates the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 60263] [pmid 16636067] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 2674130] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11090627] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	Gx; EN-7; HSPC022	Gx; EN-7; HSPC022
Homo sapiens	RefSeq	NM_002707.3	ILMN_3981	PPM1G	NM_002707.3	NM_002707.3		5496	29826283	NM_002707.3	PPM1G	NP_002698.1	ILMN_1806867	0003140008	A	2066	CTCCATGGCCCTCGGCCGCTTGCACCCGCTCTCTGTTGTACACTTTCAAT	2	-	27604083-27604132	2p23.3a	Homo sapiens protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform (PPM1G), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9271424] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9276438] [evidence TAS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9271424] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 9276438] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	MGC2870; PP2CG; PP2CGAMMA; PPP2CG; MGC1675	MGC2870; PP2CG; PP2CGAMMA; PPP2CG; MGC1675
Homo sapiens	RefSeq	NM_022977.1	ILMN_177778	ACSL4	NM_022977.1	NM_022977.1		2182	12669908	NM_022977.1	ACSL4	NP_075266.1	ILMN_2391458	0000130131	A	1782	AAAAAGGTCAAGGCCCTGCTGGGAGGGAATGTCCGCATGATGCTGTCTGG	X	-	108798097-108798146	Xq22.3c-q22.3d	Homo sapiens acyl-CoA synthetase long-chain family member 4 (ACSL4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9598324] [evidence NAS]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [pmid 9480748] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [pmid 9480748] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MRX68; FACL4; ACS4; MRX63; LACS4	MRX68; FACL4; ACS4; MRX63; LACS4
Homo sapiens	RefSeq	NM_022977.1	ILMN_177778	ACSL4	NM_022977.1	NM_022977.1		2182	12669908	NM_022977.1	ACSL4	NP_075266.1	ILMN_2285506	0003800133	I	389	GCCTTGGCTGTACTGCTATTCTTACTGCTGCTTCTATTATTGCCTTCTTC	X	-	108813438-108813487	Xq22.3c-q22.3d	Homo sapiens acyl-CoA synthetase long-chain family member 4 (ACSL4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9598324] [evidence NAS]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [pmid 9480748] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [pmid 9480748] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MRX68; FACL4; ACS4; MRX63; LACS4	MRX68; FACL4; ACS4; MRX63; LACS4
Homo sapiens	RefSeq	NM_014408.3	ILMN_23547	TRAPPC3	NM_014408.3	NM_014408.3		27095	34222308	NM_014408.3	TRAPPC3	NP_055223.1	ILMN_1751627	0001740674	S	1139	TGGGAAGCCACCCAGGTCTCATTCCTCCCTGCTGTTGGAGGCAACATCTC	1	-	36602246-36602295	1p34.3d	Homo sapiens trafficking protein particle complex 3 (TRAPPC3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]		BET3	BET3
Homo sapiens	RefSeq	XM_937933.1	ILMN_32903	LOC646561	XM_937933.2	XM_937933.2		646561	113416284	XM_937933.2	LOC646561	XP_943026.1	ILMN_1739570	0003440215	S	1979	TTGGAGGACTTGGAGTGGGCCTTGAGCTTGGCCTTTAGATTAACAAGGGC				4q31.22a	PREDICTED: Homo sapiens similar to WW45 protein (LOC646561), mRNA.					
Homo sapiens	RefSeq	XM_927104.1	ILMN_40251	LOC642954	XM_931860.2	XM_931860.2		642954	113416419	XM_931860.2	LOC642954	XP_936953.1	ILMN_1775293	0006580397	A	886	CTCAGTTGACACTCACACTGCTGAAGTGAACTGCCTTTCTTTCAGTCCTT	5	-	14850659-14850708	5p15.2a	PREDICTED: Homo sapiens hypothetical LOC642954, transcript variant 5 (LOC642954), mRNA.					
Homo sapiens	RefSeq	NM_005486.1	ILMN_16672	TOM1L1	NM_005486.1	NM_005486.1		10040	4885638	NM_005486.1	TOM1L1	NP_005477.1	ILMN_1802642	0005720112	S	1354	TACGAGGTAATGGAGTTTGATCCCTTAGCTCCTGCTGTCACTACAGAAGC	17	+	50382447-50382486:50392926-50392935	17q22b	Homo sapiens target of myb1 (chicken)-like 1 (TOM1L1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 10329004] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 15611048] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15611048] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the multivesicular body (MVB) sorting pathway; ubiquitin-tagged proteins are sorted into MVBs, and delivered to a lysosome/vacuole for degradation [goid 43162] [pmid 15611048] [evidence NAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15611048] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [evidence IEA]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [pmid 15611048] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Increases the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 30295] [evidence IEA]	SRCASM	SRCASM
Homo sapiens	RefSeq	NM_033407.2	ILMN_27871	DOCK7	NM_033407.2	NM_033407.2		85440	54112428	NM_033407.2	DOCK7	NP_212132.2	ILMN_1678629	0002640128	S	6295	GGCAGTATTGCCTGTCACCTGCCACAGAGATTCCTTCAGTCGAATGAGCC	1	-	62923257-62923306	1p31.3d-p31.3c	Homo sapiens dedicator of cytokinesis 7 (DOCK7), mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [pmid 16982419] [evidence TAS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [pmid 16982419] [evidence TAS]; The region of a cell situated near the base. For example, in a polarized epithelial cell, the basal surface rests on the basal lamina that separates the epithelium from other tissue [goid 45178] [pmid 16982419] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [pmid 16982419] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [pmid 16982419] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [pmid 16982419] [evidence IMP]; Any process that initiates the activity of an inactive GTPase of the Rac family through the replacement of GDP by GTP [goid 32863] [pmid 16982419] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-serine [goid 33138] [pmid 16982419] [evidence IMP]; The specification and formation of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system [goid 45200] [pmid 16982419] [evidence IMP]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [pmid 16982419] [evidence IDA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]	KIAA1771; ZIR2	KIAA1771; ZIR2
Homo sapiens	RefSeq	XM_945141.1	ILMN_43734	LOC649094	XM_945141.1	XM_945141.1		649094	88959127	XM_945141.1	LOC649094	XP_950234.1	ILMN_1690941	0002260451	I	68	GATTGAGTGAAAAATGAGAAAGGTTAACTCAGCATACTGTAACTCTTCGT					PREDICTED: Homo sapiens similar to Nucleoporin-like protein RIP (HIV-1 Rev-binding protein) (Rev interacting protein) (Rev/Rex activation domain-binding protein), transcript variant 3 (LOC649094), mRNA.					
Homo sapiens	RefSeq	NM_006856.1	ILMN_13310	ATF7	NM_006856.1	NM_006856.1		11016	5802979	NM_006856.1	ATF7	NP_006847.1	ILMN_1706967	0001500400	S	2614	ACCGCCCCTGTCTCTCTTCATTCCCCTATCAACATTACCGCCCCTGTCTC	12	-	52196071-52196120	12q13.13e	Homo sapiens activating transcription factor 7 (ATF7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1694576] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC57182; ATFA	MGC57182; ATFA
Homo sapiens	RefSeq	XM_001727010.1	ILMN_346830	LOC643371	XM_001727010.1	XM_001727010.1		643371	169217154	XM_001727010.1	LOC643371	XP_001727062.1	ILMN_3289338	0006770093	M	745	GGATCCCCCACAGTGTGAAAATAGCCGTCTGTGACATCTTACCCCCAAGG				Xq21.32a	PREDICTED: Homo sapiens similar to Tubulin, Beta family member (tbb-1) (LOC643371), mRNA.					
Homo sapiens	RefSeq	XM_930156.1	ILMN_14206	KPNA2	NM_002266.2	NM_002266.2		3838	62388891	NM_002266.2	KPNA2	NP_002257.1	ILMN_1721868	0004230196	A	784	ATGTCATCTTTAGCATGTGGCTACTTACGTAATCTTACCTGGACACTTTC	17	+	63469563-63469577:63469678-63469712	17q24.2b	Homo sapiens karyopherin alpha 2 (RAG cohort 1, importin alpha 1) (KPNA2), mRNA. XM_001133262 XM_001133265 XM_001133267 XM_001133271	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9020106] [evidence TAS]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7565597] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7754385] [evidence TAS]	The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA recombination, a process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents [goid 18] [pmid 8016130] [evidence TAS]; A microtubule-based process that occurs only during M phase of the cell cycle [goid 72] [pmid 7565597] [evidence TAS]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [pmid 7565597] [evidence TAS]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [pmid 9168958] [evidence TAS]; The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane [goid 6607] [pmid 9020106] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9497340] [evidence IPI]; Interacting selectively with a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus [goid 8139] [pmid 9020106] [evidence TAS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	RCH1; IPOA1; SRP1alpha; QIP2	
Homo sapiens	RefSeq	NM_002266.2	ILMN_14206	KPNA2	NM_002266.2	NM_002266.2		3838	62388891	NM_002266.2	KPNA2	NP_002257.1	ILMN_1708160	0006250609	S	1935	AGCATCCTGTAAATAAACATTCAAGTCCACCCTTTTCTTGACTTCAAAAA	17	+	63473387-63473432:66031848-66031851	17q24.2b	Homo sapiens karyopherin alpha 2 (RAG cohort 1, importin alpha 1) (KPNA2), mRNA. XM_001133262 XM_001133265 XM_001133267 XM_001133271	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9020106] [evidence TAS]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7565597] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7754385] [evidence TAS]	The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA recombination, a process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents [goid 18] [pmid 8016130] [evidence TAS]; A microtubule-based process that occurs only during M phase of the cell cycle [goid 72] [pmid 7565597] [evidence TAS]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [pmid 7565597] [evidence TAS]; The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [pmid 9168958] [evidence TAS]; The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane [goid 6607] [pmid 9020106] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9497340] [evidence IPI]; Interacting selectively with a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus [goid 8139] [pmid 9020106] [evidence TAS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	RCH1; IPOA1; SRP1alpha; QIP2	RCH1; IPOA1; SRP1alpha; QIP2
Homo sapiens	RefSeq	NM_080590.1	ILMN_17504	CAPS	NM_080590.1	NM_080590.1		828	18104963	NM_080590.1	CAPS	NP_542157.1	ILMN_1757660	0006760450	A	1031	CCAGGTGTGGAGCGAGGGGCACAGGGGCATCCTAACCTCAGAAACTGAAA	19	+	5866751-5866800	19p13.3b	Homo sapiens calcyphosine (CAPS), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 2540953] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 2540953] [evidence TAS]	MGC126562; CAPS1	MGC126562; CAPS1
Homo sapiens	RefSeq	XM_938049.1	ILMN_31835	LOC648972	XM_938049.1	XM_938049.1		648972	89060773	XM_938049.1	LOC648972	XP_943142.1	ILMN_1657222	0006960139	S	191	TCACACCCAGTGTTCTATGTGGGATGTTCAGCAGCTGGGTCACCCCTGCT					PREDICTED: Homo sapiens similar to XAGE-3 protein (LOC648972), mRNA.					
Homo sapiens	RefSeq	NM_173566.2	ILMN_371275	C22ORF30	NM_173566.2	NM_173566.2		253143	209969818	NM_173566.2	C22orf30	NP_775837.2	ILMN_3307887	0001440619	S	10588	TTTGAATTCTTGGTGAGAGGCCTCAGCATCTCCTTGGGCTGGTCTGGGCC	22	-	32077524-32077573	22q12.2c	Homo sapiens chromosome 22 open reading frame 30 (C22orf30), mRNA.					
Homo sapiens	RefSeq	NM_001001968.1	ILMN_17430	OR6S1	NM_001001968.1	NM_001001968.1		341799	50233849	NM_001001968.1	OR6S1	NP_001001968.1	ILMN_1678150	0002680719	S	485	CAGTGGCTGTGGCCTTGCTTCCTTTCTGTAAGCAGGGTGCTGTGGTACAG	14	-	21109316-21109365	14q11.2b	Homo sapiens olfactory receptor, family 6, subfamily S, member 1 (OR6S1), mRNA.				OR14-37; OR6S1Q	OR14-37; OR6S1Q
Homo sapiens	RefSeq	XM_929418.1	ILMN_46011	LOC646494	XM_929418.1	XM_929418.1		646494	89045070	XM_929418.1	LOC646494	XP_934511.1	ILMN_1745617	0000940195	S	409	AAAGGAAGCAGTCAGCAAGCGCCATCCACCCCAGCTTTTCTCTCCCTGGG	18	-	14978056-14978105		PREDICTED: Homo sapiens similar to TBC1 domain family, member 3 (LOC646494), mRNA.					
Homo sapiens	RefSeq	NM_001541.2	ILMN_24974	HSPB2	NM_001541.2	NM_001541.2		3316	32306514	NM_001541.2	HSPB2	NP_001532.1	ILMN_1671046	0001570288	S	581	GAGGCAGCCATAGTTGAGCCCTGATTGCCACAGACCCAGCACCCAGCAAA	11	+	111289806-111289829:111289830-111289855	11q23.1b	Homo sapiens heat shock 27kDa protein 2 (HSPB2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9490724] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 9344664] [evidence NAS]; The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure. This muscle is found in Nematodes [goid 7525] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14594798] [evidence IPI]; Increases the activity of an enzyme [goid 8047] [pmid 9490724] [evidence TAS]	Hs.78846; LOH11CR1K; HSP27; MGC133245; MKBP	Hs.78846; LOH11CR1K; HSP27; MGC133245; MKBP
Homo sapiens	RefSeq	NM_031429.1	ILMN_172756	RTBDN	NM_001080997.1	NM_001080997.1		83546	124486583	NM_001080997.1	RTBDN	NP_001074466.1	ILMN_1748189	0004040538	S	949	AGCTCCAGAGACCCACCCCTCTCCAGGTTATCCCAGAAATGACCCAACTC	19	-	12936341-12936390	19p13.13c	Homo sapiens retbindin (RTBDN), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ36353	FLJ36353
Homo sapiens	RefSeq	XM_929066.1	ILMN_35950	LOC646106	XM_929066.1	XM_929066.1		646106	89052418	XM_929066.1	LOC646106	XP_934159.1	ILMN_1661357	0006620468	S	8	GGCTGGATGGAACAGGAGGGGGGCTGCTGCCTGATCAGACCCCCACCGGT	19	-	10188996-10189012:10193017-10193049	19p13.2c	PREDICTED: Homo sapiens similar to chromosome 22 open reading frame 16 (LOC646106), mRNA.					
Homo sapiens	Unigene	Hs.560407	ILMN_114229	HS.560407	Hs.560407		Hs.560407		20361118	BQ185567			ILMN_1915971	0000520110	S	432	AGCTCCAGGTAAAGGATGGCAGGCTTGGGGGCATCAGCCTCAACATGAGA	16	+	82812657-82812706		UI-E-EJ1-ajp-k-17-0-UI.s1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajp-k-17-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_170681.1	ILMN_16025	GFM2	NM_170681.1	NM_170681.1		84340	25306282	NM_170681.1	GFM2	NP_733781.1	ILMN_1686668	0007320452	A	1275	CAGTGCCTGTGCTTTGTGGAAGTGCCCTGAAAAACAAAGGGATACAGCCC	5	-	74071628-74071677	5q13.3a-q13.3b	Homo sapiens G elongation factor, mitochondrial 2 (GFM2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	hEFG2; EFG2; MST027	hEFG2; EFG2; MST027
Homo sapiens	RefSeq	NM_170681.1	ILMN_16025	GFM2	NM_170681.1	NM_170681.1		84340	25306282	NM_170681.1	GFM2	NP_733781.1	ILMN_2378696	0004150424	A	1671	CTGCAGCTCGTAGAGCCGAACGGGAGGGAGAAAAGAAGCACAGACAAAAC	5	-	74068470-74068519	5q13.3a-q13.3b	Homo sapiens G elongation factor, mitochondrial 2 (GFM2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	hEFG2; EFG2; MST027	hEFG2; EFG2; MST027
Homo sapiens	RefSeq	NM_001005494.1	ILMN_12425	OR6C4	NM_001005494.1	NM_001005494.1		341418	53828707	NM_001005494.1	OR6C4	NP_001005494.1	ILMN_1708747	0005820397	S	319	GCTACCGAGTTTTACCTCCTGGCCTCCATGTCTTATGATCGTTATGTGGC	12	+	54231596-54231645	12q13.2b	Homo sapiens olfactory receptor, family 6, subfamily C, member 4 (OR6C4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR12-10	OR12-10
Homo sapiens	RefSeq	NM_016298.1	ILMN_23199	FBXO40	NM_016298.2	NM_016298.2		51725	142371605	NM_016298.2	FBXO40	NP_057382.1	ILMN_1762155	0002190039	S	3145	GTCATGCCAGAATGCACAGGGCAGCCCAGGGAGATCACACCTTTGGCAAA				3q13.33c	Homo sapiens F-box protein 40 (FBXO40), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129903; KIAA1195; MGC129902; Fbx40	MGC129903; KIAA1195; MGC129902; Fbx40
Homo sapiens	RefSeq	NM_152522.2	ILMN_11477	ARL6IP6	NM_152522.3	NM_152522.3		151188	142360491	NM_152522.3	ARL6IP6	NP_689735.1	ILMN_1797964	0000670382	S	660	AGCTGCTCTTACTGTAGCATGGTGCCTCATGTAAACCCACACTGGAGCGA	2	+	153324567-153324600:153324601-153324616	2q23.3d	Homo sapiens ADP-ribosylation-like factor 6 interacting protein 6 (ARL6IP6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC33864; PFAAP1	MGC33864; PFAAP1
Homo sapiens	Unigene	Hs.565395	ILMN_117874	HS.565395	Hs.565395		Hs.565395		19759068	BQ023789			ILMN_1822542	0001990647	S	66	GGGAAAAGAAGCACTCTCATACCTTGCTGGTGGGAGACCAAAATGGAGGA	2	+	165328107-165328156		UI-1-BB1p-aur-d-03-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-aur-d-03-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_207115.1	ILMN_7148	ZNF580	NM_207115.1	NM_207115.1		51157	46361969	NM_207115.1	ZNF580	NP_996998.1	ILMN_1653310	0000610309	I	94	GGGGAAGCCCGGGGCCGCCCGGGACCTCGGCCCGTTCCTCCGGACCCGAG	19	+	56152485-56152534	19q13.42c	Homo sapiens zinc finger protein 580 (ZNF580), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_929485.1	ILMN_32154	LOC646552	XM_929485.1	XM_929485.1		646552	89040210	XM_929485.1	LOC646552	XP_934578.1	ILMN_1784764	0007320746	S	3	GAAGGGAGGGAATCCAATTTTACGAGAGGGTGTAGCCTGGTGCTGCCATG	16	+	11926631-11926669:11927556-11927566		PREDICTED: Homo sapiens similar to Group X secretory phospholipase A2 precursor (Phosphatidylcholine 2-acylhydrolase GX) (GX sPLA2) (sPLA2-X) (LOC646552), mRNA.					
Homo sapiens	RefSeq	NM_153647.2	ILMN_5087	SLC24A4	NM_153647.2	NM_153647.2		123041	59938785	NM_153647.2	SLC24A4	NP_705933.1	ILMN_2370738	0002690243	A	3722	GGTTCCTCCGATCTTACAGGCTCATCCAGGTTCCAAAGTGCTTCTGTCTC	14	+	92031662-92031711	14q32.12b	Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 (SLC24A4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SLC24A2; NCKX4; FLJ38852; SHEP6	SLC24A2; NCKX4; FLJ38852; SHEP6
Homo sapiens	RefSeq	NM_021191.1	ILMN_12627	NEUROD4	NM_021191.2	NM_021191.2		58158	153792189	NM_021191.2	NEUROD4	NP_067014.2	ILMN_1677608	0006380470	S	1063	TTCAAGAGTTTGGGAGAATCGTCCTTTGGGAGCCATCTGCCTGACTGCAG	12	+	53707175-53707224	12q13.2a	Homo sapiens neurogenic differentiation 4 (NEUROD4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a glial cell [goid 10001] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	ATH3; ATH-3; Atoh3; MATH-3	ATH-3; Atoh3; MATH-3
Homo sapiens	Unigene	Hs.37648	ILMN_72502	HS.37648	Hs.37648		Hs.37648		16550830	AK055969			ILMN_1867517	0004860280	S	1797	gcatgtgtatgatgtgtgtgcgtcggaccgcttctaggctactaagtgtc	15	-	58573383-58573432		Homo sapiens cDNA FLJ31407 fis, clone NT2NE2000137					
Homo sapiens	RefSeq	NR_002735.1	ILMN_6707	SNORD61	NR_002735.1	NR_002735.1		26787	84872019	NR_002735.1	SNORD61		ILMN_3237439	0006130092	S	22	TTGATCGTCTGACATGATAATGTATTTTTGTCCTCTAAGAAGTTCTGAGC	X	-	135961359-135961408	Xq26.3c	Homo sapiens small nucleolar RNA, C/D box 61 (SNORD61), small nuclear RNA.				RNU61; HBII-342; U61	RNU61; HBII-342; U61
Homo sapiens	RefSeq	NM_198498.1	ILMN_13114	C11ORF53	NM_198498.1	NM_198498.1		341032	38348309	NM_198498.1	C11orf53	NP_940900.1	ILMN_1674017	0003400484	S	696	CTTCACCCCTTTCATGACGGTGTCAAATGACCTACCGCCCAAGGTGGGGC	11	+	110661827-110661876	11q23.1a	Homo sapiens chromosome 11 open reading frame 53 (C11orf53), mRNA.				MGC50104	MGC50104
Homo sapiens	RefSeq	XM_942380.1	ILMN_176451	LOC730050	XR_016083.1	XR_016083.1		730050	113411513	XR_016083.1	LOC730050		ILMN_1736563	0000830709	S	1748	TCAAGGTGCTGCCGATCATCAATGAGGCCACGGCAGCAGCCATCGCCTAT	1	+	159843210-159843259	1q23.3b	PREDICTED: Homo sapiens similar to heat shock 70kDa protein 6 (HSP70B) (LOC730050), mRNA.					
Homo sapiens	RefSeq	XM_939096.1	ILMN_45622	LOC650008	XM_939096.1	XM_939096.1		650008	88978950	XM_939096.1	LOC650008	XP_944189.1	ILMN_1734201	0000130358	S	41	CCATGAATCAGGACGCAGCCCTCACCAGCCTATCCACGAATCAGGACACG					PREDICTED: Homo sapiens similar to Location Of Vulva defective family member (lov-1) (LOC650008), mRNA.					
Homo sapiens	RefSeq	NM_006269.1	ILMN_17146	RP1	NM_006269.1	NM_006269.1		6101	5454015	NM_006269.1	RP1	NP_006260.1	ILMN_1681454	0002630326	S	5520	TGGCCCCAGGCCCAACGATGGATGAACTCTCCTCTTCAGAACTCGAGGAA	8	+	55541814-55541863	8q12.1a	Homo sapiens retinitis pigmentosa 1 (autosomal dominant) (RP1), mRNA.		The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10391211] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons from visible light into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 7603] [pmid 10391211] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DCDC4A; ORP1	DCDC4A; ORP1
Homo sapiens	Unigene	Hs.444291	ILMN_92710	HS.444291	Hs.444291		Hs.444291		50479177	CR598370			ILMN_1863196	0002000050	S	1382	GGTATCCCCAACAGCTCTTGTACAGTGCCTTGCTCATAGAAGGTACTTAG	2	+	9614867-9614916		full-length cDNA clone CS0DF003YI18 of Fetal brain of Homo sapiens (human)					
Homo sapiens	RefSeq	NM_012141.1	ILMN_38649	INTS6	NM_001039937.1	NM_001039937.1		26512	90193621	NM_001039937.1	INTS6	NP_001035026.1	ILMN_1655557	0001820341	S	3028	CCTCCAAATCTCTTGCTTGTCATTGACTCTTGCGTGTCAATTTCCCTCAG	13	-	51939596-51939645	13q14.3c	Homo sapiens integrator complex subunit 6 (INTS6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A protein complex that stably associates with the C-terminus of RNA polymerase II and mediates 3'-end processing of small nuclear RNAs generated by RNA polymerase II [goid 32039] [pmid 16239144] [evidence IDA]	Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule [goid 16180] [pmid 16239144] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 10467397] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17310990] [evidence IPI]	DDX26; DBI-1; DKFZP434B105; Notchl2; INT6; DDX26A; HDB; DICE1	DBI-1; DKFZP434B105; INTS6; Notchl2; INT6; DDX26A; HDB; DICE1
Homo sapiens	RefSeq	NM_022118.3	ILMN_15113	RBM26	NM_022118.3	NM_022118.3		64062	31652263	NM_022118.3	RBM26	NP_071401.3	ILMN_1740716	0003190689	S	2751	GCAGCTGCAGTTCATGGAGCTCGTTTCAAAGGGCAAGATCTAAAACTGGC	13	-	79896550-79896597:79908479-79908480	13q31.1a	Homo sapiens RNA binding motif protein 26 (RBM26), mRNA.				MGC133296; C13orf10; FLJ20957; ZC3H17; PRO1777; RP11-255E21.1; ARRS2; SE70-2; MGC133295	MGC133296; C13orf10; FLJ20957; ZC3H17; PRO1777; RP11-255E21.1; ARRS2; SE70-2; MGC133295
Homo sapiens	RefSeq	NM_031949.3	ILMN_25631	TTLL2	NM_031949.3	NM_031949.3		83887	46048219	NM_031949.3	TTLL2	NP_114155.3	ILMN_1697086	0006560524	S	2473	GTCGCCGTTCCTGAGAGGAGAAACACATGGAAATAAGGTCTCTTCCTGTC	6	+	167691767-167691793:167692801-167692823	6q27d	Homo sapiens tubulin tyrosine ligase-like family, member 2 (TTLL2), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	dJ366N23.3; C6orf104; NYD-TSPG	dJ366N23.3; C6orf104; NYD-TSPG
Homo sapiens	RefSeq	NM_001010892.1	ILMN_30035	RSHL3	NM_001010892.1	NM_001010892.1		345895	58219005	NM_001010892.1	RSHL3	NP_001010892.1	ILMN_1689212	0002630519	S	2563	GTACATTCCTGTTTTTAAAAGGGCTCAGGTTTCACATGGTCCAGGTGAGG	6	+	117060572-117060621	6q22.1d	Homo sapiens radial spokehead-like 3 (RSHL3), mRNA.				MGC126303; FLJ37974; dJ412I7.1	MGC126303; FLJ37974; dJ412I7.1
Homo sapiens	RefSeq	NM_001033517.1	ILMN_5169	SERINC4	NM_001033517.1	NM_001033517.1		619189	75677607	NM_001033517.1	SERINC4	NP_001028689.1	ILMN_1704512	0007610148	S	1302	GTCAAGGTTGCCTCATGCTGGGCCTGCGTACTCCTCTATCTGGGGCTGTT	15	-	44087303-44087352	15q15.3b	Homo sapiens serine incorporator 4 (SERINC4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]		FLJ40363	FLJ40363
Homo sapiens	RefSeq	NM_016306.4	ILMN_14179	DNAJB11	NM_016306.4	NM_016306.4		51726	51317390	NM_016306.4	DNAJB11	NP_057390.1	ILMN_1753243	0003190452	S	1507	ACCTCTCCCTTTGGGGATTTAATGTCTGGTGCTGCCGCCTGAGTTTCAAG	3	+	186303407-186303456	3q27.3a	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 11 (DNAJB11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16130169] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically [goid 16556] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	PRO1080; HEDJ; ABBP-2; UNQ537; hDj9; EDJ; ERdj3; ERj3; ABBP2	PRO1080; HEDJ; ABBP-2; UNQ537; hDj9; EDJ; ERdj3; ERj3; ABBP2
Homo sapiens	RefSeq	NR_028372.1	ILMN_386780	RNU6-15	NR_028372.1	NR_028372.1		100302741	256773188	NR_028372.1	RNU6-15		ILMN_3310351	0004780504	S	42	AGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCAAATTCGTGAA					Homo sapiens RNA, U6 small nuclear 15 (RNU6-15), small nuclear RNA.					
Homo sapiens	RefSeq	NM_001000.2	ILMN_16298	RPL39	NM_001000.2	NM_001000.2		6170	16306563	NM_001000.2	RPL39	NP_000991.1	ILMN_1737015	0001850338	S	16	CTCCTCTTCCTTTCTCCGCCATCGTGGTGTGTTCTTGACTCCGCTGCTCG	X	-	118925541-118925590	Xq24c	Homo sapiens ribosomal protein L39 (RPL39), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 8764829] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8764829] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8764829] [evidence TAS]		
Homo sapiens	RefSeq	NM_032304.2	ILMN_15715	HAGHL	NM_032304.2	NM_032304.2		84264	46361985	NM_032304.2	HAGHL	NP_115680.1	ILMN_1706262	0002710274	I	62	AATTCCACGCGAGTGCCGGGGAGTTCCTGGGGAGCCGGGCTTCTCTTTTG	16	+	717328-717377	16p13.3f	Homo sapiens hydroxyacylglutathione hydrolase-like (HAGHL), transcript variant 2, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC2605	MGC2605
Homo sapiens	RefSeq	NM_032304.2	ILMN_15715	HAGHL	NM_032304.2	NM_032304.2		84264	46361985	NM_032304.2	HAGHL	NP_115680.1	ILMN_1793201	0006900431	A	1157	CACATGAGGGCCACCTCTGGAACCTTCTTCGAGGCCCTGGCCAGCCATCT	16	+	719521-719570	16p13.3f	Homo sapiens hydroxyacylglutathione hydrolase-like (HAGHL), transcript variant 2, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC2605	MGC2605
Homo sapiens	RefSeq	NR_023928.1	ILMN_365209	C18ORF2	NR_023928.1	NR_023928.1		56651	193083205	NR_023928.1	C18orf2		ILMN_3250066	0006620114	A	1575	CGGTCAAGAAGAAGTCATAACATGGGTGTCTGGGAGAGCTTTTATCCCAC	18	-	1268872-1268921		Homo sapiens chromosome 18 open reading frame 2 (C18orf2), transcript variant 4, non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NR_023928.1	ILMN_365209	C18ORF2	NR_023928.1	NR_023928.1		56651	193083205	NR_023928.1	C18orf2		ILMN_3250914	0004570020	M	1748	GTCCTACACGCTGAGCAACAGGCAGAAATATTGCCATCGCTGAGTTGCAG	18	-	1268699-1268748		Homo sapiens chromosome 18 open reading frame 2 (C18orf2), transcript variant 4, non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_001040626.1	ILMN_178648	NCALD	NM_001040626.1	NM_001040626.1		83988	98985786	NM_001040626.1	NCALD	NP_001035716.1	ILMN_2343097	0000520553	A	3579	AGCCTATGGAGTGGCCCGTAAATCAGTTGACTGTGTAGCTCTTGCCTGGC	8	-	102768261-102768310	8q22.3b	Homo sapiens neurocalcin delta (NCALD), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11964161] [evidence NAS]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [pmid 11964161] [evidence NAS]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 11964161] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11964161] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of tubulin, including microtubules [goid 15631] [pmid 11964161] [evidence IDA]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [pmid 11964161] [evidence IDA]	MGC33870; MGC74858	MGC33870; MGC74858
Homo sapiens	RefSeq	NM_014478.4	ILMN_22485	CRCP	NM_014478.4	NM_014478.4		27297	100913024	NM_014478.4	CRCP	NP_055293.1	ILMN_2381537	0006480121	A	2205	GGAATCGCTTGAACCGGGGAGGCAGAGGTTGCAGTGAGCCAGATCGTGCA	7	+	65256392-65256441	7q11.21e	Homo sapiens CGRP receptor component (CRCP), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A DNA polymerase complex that contains two complexes of the catalytic alpha, beta, delta and epsilon polymerase/exonuclease subunits, plus the DnaX complex, a heptamer that includes the tau and gamma products of the dnaX gene and confers structural asymmetry that allows the polymerase to replicate both leading and lagging strands [goid 9360] [pmid 12482973] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 12482973] [evidence IDA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [pmid 10067875] [evidence NAS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 12482973] [evidence IDA]; Combining with calcitonin to initiate a change in cell activity [goid 4948] [pmid 8622957] [evidence NAS]	MGC111194; CGRP-RCP; RCP; CRCP	MGC111194; CGRP-RCP; RCP; Crcp
Homo sapiens	RefSeq	NM_014478.4	ILMN_22485	CRCP	NM_014478.4	NM_014478.4		27297	100913024	NM_014478.4	CRCP	NP_055293.1	ILMN_2280053	0006980605	I	234	GTGGAAAGAATAAACACAGCTCTGGGCAACAGAACTTGAACACTATCACC	7	+	65233209-65233258	7q11.21e	Homo sapiens CGRP receptor component (CRCP), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A DNA polymerase complex that contains two complexes of the catalytic alpha, beta, delta and epsilon polymerase/exonuclease subunits, plus the DnaX complex, a heptamer that includes the tau and gamma products of the dnaX gene and confers structural asymmetry that allows the polymerase to replicate both leading and lagging strands [goid 9360] [pmid 12482973] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 12482973] [evidence IDA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [pmid 10067875] [evidence NAS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 12482973] [evidence IDA]; Combining with calcitonin to initiate a change in cell activity [goid 4948] [pmid 8622957] [evidence NAS]	MGC111194; CGRP-RCP; RCP; CRCP	MGC111194; CGRP-RCP; RCP; Crcp
Homo sapiens	RefSeq	NM_014478.4	ILMN_22485	CRCP	NM_014478.4	NM_014478.4		27297	100913024	NM_014478.4	CRCP	NP_055293.1	ILMN_3195213	0004010440	A	1986	ATAGGCAACATTGAAAGTACCAGATTGGGGCCAGGTGTAGCGGCCCACAC	7	+	65256173-65256222	7q11.21e	Homo sapiens CGRP receptor component (CRCP), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A DNA polymerase complex that contains two complexes of the catalytic alpha, beta, delta and epsilon polymerase/exonuclease subunits, plus the DnaX complex, a heptamer that includes the tau and gamma products of the dnaX gene and confers structural asymmetry that allows the polymerase to replicate both leading and lagging strands [goid 9360] [pmid 12482973] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 12482973] [evidence IDA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [pmid 10067875] [evidence NAS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 12482973] [evidence IDA]; Combining with calcitonin to initiate a change in cell activity [goid 4948] [pmid 8622957] [evidence NAS]	MGC111194; CGRP-RCP; RCP; CRCP	MGC111194; CGRP-RCP; RCP; Crcp
Homo sapiens	RefSeq	NM_001085372.1	ILMN_307024	C11ORF83	NM_001085372.1	NM_001085372.1		790955	145977195	NM_001085372.1	C11orf83	NP_001078841.1	ILMN_3240370	0000460397	S	289	AGGCAGCGACCACGCAGGAGAACGTGGCCTGGAGGAAGAACTGGATGGTT	11	+	62196077-62196126	11q12.3a	Homo sapiens chromosome 11 open reading frame 83 (C11orf83), mRNA.				MGC87549	MGC87549
Homo sapiens	Unigene	Hs.542484	ILMN_106320	HS.542484	Hs.542484		Hs.542484		24660021	BC039538			ILMN_1858833	0004230639	S	1391	ATGAGCAAGGTGGAGGGTAACCAAGGGGACCAGGCCAACAGCATGGAGCT	20	-	7230999-7231048		Homo sapiens, clone IMAGE:5745053, mRNA					
Homo sapiens	RefSeq	XM_001133436.1	ILMN_177528	LOC729866	XM_001133436.1	XM_001133436.1		729866	113412406	XM_001133436.1	LOC729866	XP_001133436.1	ILMN_3226056	0007550544	A	133	ACTGAAAGAGGTAGTAGGGTCCGTCAGCGAGGCTGGTCGCAACTCACAAC				1q23.1d	PREDICTED: Homo sapiens hCG1994895 (LOC729866), mRNA.					
Homo sapiens	RefSeq	XM_931506.1	ILMN_33281	LOC389901	XM_931506.1	XM_931506.1		389901	89060334	XM_931506.1	LOC389901	XP_936599.1	ILMN_1747423	0000770358	A	1649	ACCAAGAGAAAACATGATAATGAAGCTGCTGGAAGCCCTCACCAAGCACT	X	-	149149959-149149984:149150134-149150157	Xq28c	PREDICTED: Homo sapiens similar to ATP-dependent DNA helicase II, 70 kDa subunit (Lupus Ku autoantigen protein p70) (Ku70) (70 kDa subunit of Ku antigen) (Thyroid-lupus autoantigen) (TLAA) (CTC box binding factor 75 kDa subunit) (CTCBF) (CTC75), transcript variant 2 (LOC389901), mRNA.					
Homo sapiens	RefSeq	NM_015314.1	ILMN_28455	KIAA0895	NM_015314.2	NM_015314.2		23366	154426293	NM_015314.2	KIAA0895	NP_056129.2	ILMN_1690484	0003890164	S	3559	GCCTTAATTTCCTGTTGGTCGGATCATTTGCAGCAGTTCTAGTTCCTGAC	7	-	36364797-36364846	7p14.2a	Homo sapiens KIAA0895 (KIAA0895), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	XM_942140.1	ILMN_39273	LOC652608	XM_942140.1	XM_942140.1		652608	89071890	XM_942140.1	LOC652608	XP_947233.1	ILMN_1660477	0001740598	S	180	GCTGTGGAAGCCCAGACACCAGGAGAGTGATGGTTTTCCTGAAGCAGCTG					PREDICTED: Homo sapiens similar to 60S ribosomal protein L6 (TAX-responsive enhancer element-binding protein 107) (TAXREB107) (Neoplasm-related protein C140) (LOC652608), mRNA.					
Homo sapiens	RefSeq	NM_032831.1	ILMN_15900	ORAI2	NM_032831.1	NM_032831.1		80228	14249537	NM_032831.1	ORAI2	NP_116220.1	ILMN_1652928	0006400113	S	1955	TGTTATGACACCAAGTGACTACAAGGGAGGCAAGACCCCTCCAGGCCTCC	7	+	101875595-101875644	7q22.1e	Homo sapiens ORAI calcium release-activated calcium modulator 2 (ORAI2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TMEM142B; ORAI2; FLJ12474; CBCIP2; FLJ14733; C7orf19	TMEM142B; ORAI2; FLJ12474; CBCIP2; FLJ14733; C7orf19
Homo sapiens	RefSeq	XM_001129363.2	ILMN_169987	FAM90A17	XM_001129363.2	XM_001129363.2		728746	169172863	XM_001129363.2	FAM90A17	XP_001129363.1	ILMN_3244631	0004070102	S	84	TGGGCCAAGGGCTCCCCCGCCCGATGAAGAAGATCCCAGGCTCAAGTGCA	8	+	7641049-7641088:7641583-7641592	8p23.1e	PREDICTED: Homo sapiens family with sequence similarity 90, member A17 (FAM90A17), mRNA.					
Homo sapiens	RefSeq	NM_015710.3	ILMN_20388	GLTSCR2	NM_015710.3	NM_015710.3		29997	52851435	NM_015710.3	GLTSCR2	NP_056525.1	ILMN_1703565	0003610286	S	1389	ACGCAAGTACAAGGTGAAGCTGGTGGAGAAGCGGGCGTTCCGTGAGATCC	19	+	52951763-52951812	19q13.32c	Homo sapiens glioma tumor suppressor candidate region gene 2 (GLTSCR2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 10196275] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PICT-1; PICT1	PICT-1; PICT1
Homo sapiens	RefSeq	NM_194292.1	ILMN_13177	SASS6	NM_194292.1	NM_194292.1		163786	35038600	NM_194292.1	SASS6	NP_919268.1	ILMN_1680662	0002680519	S	3379	ATATTAGGCAGTTGATACTCCCCCACCTCCCCCATTTAGATACACTACTG	1	-	100549570-100549619	1p21.2a	Homo sapiens spindle assembly 6 homolog (C. elegans) (SASS6), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 15665853] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence NAS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51298] [pmid 15665853] [evidence IMP]		MGC119440; SAS6; FLJ22097; SAS-6	MGC119440; SAS6; FLJ22097; SAS-6
Homo sapiens	RefSeq	NM_194292.1	ILMN_13177	SASS6	NM_194292.1	NM_194292.1		163786	35038600	NM_194292.1	SASS6	NP_919268.1	ILMN_2089458	0004830291	S	3463	GCACTTGCTATTCTGGAAAGAAGCCTCTTGGTGATTTTGGAAGGAGCTTT	1	-	100549486-100549535	1p21.2a	Homo sapiens spindle assembly 6 homolog (C. elegans) (SASS6), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 15665853] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence NAS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51298] [pmid 15665853] [evidence IMP]		MGC119440; SAS6; FLJ22097; SAS-6	MGC119440; SAS6; FLJ22097; SAS-6
Homo sapiens	RefSeq	NM_001455.2	ILMN_15283	FOXO3	NM_001455.3	NM_001455.3		2309	146260266	NM_001455.3	FOXO3	NP_001446.1	ILMN_1687940	0004920138	I	56	TCTGCTGCGCCAGGTTCGCTGGCCGCACGTCTTCAGGTCCTCCTGTTCCT	6	+	108882124-108882173	6q21e	Homo sapiens forkhead box O3 (FOXO3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16751106] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10102273] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16751106] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10102273] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10102273] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [pmid 14734530] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 10102273] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 14734530] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16809346] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10102273] [evidence IDA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 16751106] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 10102273] [evidence IDA]	FOXO2; FKHRL1; AF6q21; DKFZp781A0677; MGC12739; FKHRL1P2; MGC31925; FOXO3A	FKHRL1; AF6q21; DKFZp781A0677; MGC12739; FKHRL1P2; MGC31925
Homo sapiens	RefSeq	NM_020175.1	ILMN_3805	DUS3L	NM_020175.1	NM_020175.1		56931	24308186	NM_020175.1	DUS3L	NP_064560.1	ILMN_1723235	0006270475	S	1753	GAGAAGACCCGGCGCTTTCTGCTCGAGTGGCTGTCCTTCCTGTGCCGGTA	19	-	5736511-5736522:5736614-5736651	19p13.3b	Homo sapiens dihydrouridine synthase 3-like (S. cerevisiae) (DUS3L), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	FLJ13896; DUS3	FLJ13896; DUS3
Homo sapiens	RefSeq	XM_001714212.1	ILMN_343130	LOC100133895	XM_001714212.1	XM_001714212.1		100133895	169201717	XM_001714212.1	LOC100133895	XP_001714264.1	ILMN_3242229	0003290128	S	1626	CAGTGGCATCCATCACTGGCAGTTCTTCTGGGAAGCGGGTGCTTCAAAAG					PREDICTED: Homo sapiens hypothetical protein LOC100133895 (LOC100133895), mRNA.					
Homo sapiens	RefSeq	NM_004796.3	ILMN_3067	NRXN3	NM_004796.3	NM_004796.3		9369	41350303	NM_004796.3	NRXN3	NP_004787.2	ILMN_1700657	0000730692	I	2174	CGGAAACGGTCCCAATGTGATCAAAGGCAACAGTGACCGCCCCCTGAATG	14	+	78503328-78503377	14q24.3d-q31.1a	Homo sapiens neurexin 3 (NRXN3), transcript variant alpha, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1621094] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 1621094] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1621094] [evidence TAS];  [goid 5246] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0743	KIAA0743
Homo sapiens	RefSeq	NM_004796.3	ILMN_3067	NRXN3	NM_004796.3	NM_004796.3		9369	41350303	NM_004796.3	NRXN3	NP_004787.2	ILMN_2338722	0000730494	A	5752	AGAGATATCAAAGCACGATTTTAGATAACCTAAACGGCCCAGCCTATACG	14	+	79400135-79400184	14q24.3d-q31.1a	Homo sapiens neurexin 3 (NRXN3), transcript variant alpha, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1621094] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 1621094] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1621094] [evidence TAS];  [goid 5246] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0743	KIAA0743
Homo sapiens	RefSeq	NM_001001431.1	ILMN_23023	TNNT2	NM_001001431.1	NM_001001431.1		7139	48255880	NM_001001431.1	TNNT2	NP_001001431.1	ILMN_2341132	0002000341	A	623	GGGGTTACATCCAGAAGACAGAGCGGAAAAGTGGGAAGAGGCAGACTGAG	1	-	201331117-201331150:201332424-201332439	1q32.1c	Homo sapiens troponin T type 2 (cardiac) (TNNT2), transcript variant 3, mRNA.	A complex of accessory proteins (typically troponin T, troponin I and troponin C) found associated with actin in muscle thin filaments; involved in calcium regulation of muscle contraction [goid 5861] [pmid 12093807] [evidence IDA]; A complex of accessory proteins (typically troponin T, troponin I and troponin C) found associated with actin in muscle thin filaments; involved in calcium regulation of muscle contraction [goid 5861] [pmid 2530435] [evidence IDA]; A complex of accessory proteins (typically troponin T, troponin I and troponin C) found associated with actin in muscle thin filaments; involved in calcium regulation of muscle contraction [goid 5861] [pmid 12186860] [evidence IDA]; A complex of accessory proteins (typically troponin T, troponin I and troponin C) found associated with actin in muscle thin filaments; involved in calcium regulation of muscle contraction [goid 5861] [pmid 2530435] [evidence IDA]; A complex of accessory proteins (typically troponin T, troponin I and troponin C) found associated with actin in muscle thin filaments; involved in calcium regulation of muscle contraction [goid 5861] [pmid 12093807] [evidence IDA]	Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 15542288] [evidence IMP]; The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated [goid 30049] [pmid 15923195] [evidence IDA]; The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated [goid 30049] [pmid 12186860] [evidence IDA]; Any process that stops or reduces the rate of ATP hydrolysis by an ATPase [goid 32780] [pmid 12093807] [evidence IDA]; Any process that stops or reduces the rate of ATP hydrolysis by an ATPase [goid 32780] [pmid 10850966] [evidence IDA]; Any process that stops or reduces the rate of ATP hydrolysis by an ATPase [goid 32780] [pmid 12093807] [evidence IDA]; Any process that activates or increases the rate of ATP hydrolysis by an ATPase [goid 32781] [pmid 12186860] [evidence IDA]; Any process that activates or increases the rate of ATP hydrolysis by an ATPase [goid 32781] [pmid 10850966] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [pmid 2530435] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [pmid 8205619] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [pmid 2530435] [evidence IDA]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [pmid 16754800] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8205619] [evidence IDA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [pmid 10850966] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12093807] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 2530435] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12093807] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 2530435] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12093807] [evidence IDA]; Interacting selectively with troponin C, the calcium-binding subunit of the troponin complex [goid 30172] [pmid 15542288] [evidence IPI]; Interacting selectively with troponin C, the calcium-binding subunit of the troponin complex [goid 30172] [pmid 8205619] [evidence IPI]; Interacting selectively with troponin I, the inhibitory subunit of the troponin complex [goid 31013] [pmid 15542288] [evidence IPI]	cTnT; CMPD2; CMH2; TnTC; MGC3889	cTnT; CMPD2; CMH2; TnTC; MGC3889
Homo sapiens	RefSeq	XM_938857.1	ILMN_44431	LOC649784	XM_938857.1	XM_938857.1		649784	89057348	XM_938857.1	LOC649784	XP_943950.1	ILMN_1715045	0000380605	S	210	TGGACCGCCTGAGAAGGGCGGCAGAAAAGGAGATGGTGACAAGATGCCTC					PREDICTED: Homo sapiens similar to breakpoint cluster region isoform 1 (LOC649784), mRNA.					
Homo sapiens	RefSeq	NM_032431.2	ILMN_10424	SYVN1	NM_032431.2	NM_032431.2		84447	51317310	NM_032431.2	SYVN1	NP_115807.1	ILMN_1803143	0002680064	A	2838	GCCAGACTCCTGGTCTTTCCAGTTTAGAAAAGGCTCTGTGCCAAGGAGGG	11	-	64894911-64894960	11q13.1c	Homo sapiens synovial apoptosis inhibitor 1, synoviolin (SYVN1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12459480] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 12459480] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [pmid 12459480] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1810; MGC40372; HRD1	KIAA1810; MGC40372; HRD1
Homo sapiens	RefSeq	NM_006250.1	ILMN_11929	PRH1	NM_006250.1	NM_006250.1		5554	9945309	NM_006250.1	PRH1	NP_006241.1	ILMN_2210534	0002970372	S	588	GTGTTTCAAATGCCGTGAAACATGGCATCATGCTCTAACTTCAGTATACC	12	-	10924840-10924889	12p13.2b	Homo sapiens proline-rich protein HaeIII subfamily 1 (PRH1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2993301] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16203048] [evidence IPI]	MGC74956; Pa	MGC74956; Pa
Homo sapiens	RefSeq	NM_006250.1	ILMN_11929	PRH1	NM_006250.1	NM_006250.1		5554	9945309	NM_006250.1	PRH1	NP_006241.1	ILMN_1795672	0000840102	S	89	CTCAGCTCAGGATTTAAATGAAGATGTCAGCCAGGAAGATGTTCCCCTCG	12	-	10926562-10926564:10926927-10926962:10928020-10928030	12p13.2b	Homo sapiens proline-rich protein HaeIII subfamily 1 (PRH1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2993301] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16203048] [evidence IPI]	MGC74956; Pa	MGC74956; Pa
Homo sapiens	RefSeq	NM_005100.2	ILMN_9320	AKAP12	NM_005100.2	NM_005100.2		9590	21493021	NM_005100.2	AKAP12	NP_005091.2	ILMN_1715532	0003290564	I	368	GTCAGCTGTCCACCATCAATGGCGTAGCTGAGCAAGATGAGCTCAGCCTC	6	+	151668591-151668640	6q25.1c	Homo sapiens A kinase (PRKA) anchor protein (gravin) 12 (AKAP12), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10858453] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10858453] [evidence TAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10858453] [evidence TAS]	DKFZp686M0430; AKAP250; DKFZp686O0331	DKFZp686M0430; AKAP250; DKFZp686O0331
Homo sapiens	RefSeq	NM_182678.1	ILMN_470	UBE2E3	NM_182678.1	NM_182678.1		10477	33359693	NM_182678.1	UBE2E3	NP_872619.1	ILMN_1765714	0005310093	I	73	AGGGTGAGGGGAGGTGTGGAGAGCGCGCACGGGAGCGCGCGGGAACAGCT	2	+	181553429-181553478	2q31.3b	Homo sapiens ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) (UBE2E3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UbcM2; UBCH9	UbcM2; UBCH9
Homo sapiens	Unigene	Hs.566359	ILMN_118695	HS.566359	Hs.566359		Hs.566359		23663292	BU734906			ILMN_1900982	0003420706	S	159	ACTTGAGGGGGTCATCTGGTCACTGCCTGATAGCTTCTGCCTACTTGGTC	5	-	44913438-44913487		UI-E-DW0-agi-g-14-0-UI.s1 UI-E-DW0 Homo sapiens cDNA clone UI-E-DW0-agi-g-14-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001719875.1	ILMN_339765	LOC731551	XM_001719875.1	XM_001719875.1		731551	169217658	XM_001719875.1	LOC731551	XP_001719927.1	ILMN_3239433	0004560240	S	181	GTGACTCTGTGCTACAGAGAGCCAGATAACGTGGGACACCGATTCGGGCC					PREDICTED: Homo sapiens hypothetical LOC731551 (LOC731551), mRNA.					
Homo sapiens	RefSeq	NM_001029887.1	ILMN_28770	HELT	NM_001029887.1	NM_001029887.1		391723	71274141	NM_001029887.1	HELT	NP_001025058.1	ILMN_1693843	0002630390	S	907	CATTACCTCAACCTGATCGGCCACGCGCACCCCAACGCCCTTAACCTGCA	4	+	185941849-185941898	4q35.1e	Homo sapiens HES/HEY-like transcription factor (HELT), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	HCM1228; Mgn; HESL	HCM1228; Mgn; HESL
Homo sapiens	RefSeq	NM_153365.1	ILMN_23725	TAPT1	NM_153365.2	NM_153365.2		202018	130977755	NM_153365.2	TAPT1	NP_699196.2	ILMN_1693882	0000610768	S	3556	TGGGGAAAGCTTTGCCAAACACAACCCTGATTTCAGAGCAGGAACATGGT	4	-	16163110-16163159	4p15.32d	Homo sapiens transmembrane anterior posterior transformation 1 (TAPT1), mRNA.				CMVFR; FLJ90013	FLJ90013
Homo sapiens	RefSeq	NM_013444.2	ILMN_654	UBQLN2	NM_013444.2	NM_013444.2		29978	16753206	NM_013444.2	UBQLN2	NP_038472.2	ILMN_1680770	0005560482	S	3038	GTGCAGCCTGAAGGATCAGTGTAGTAATGCCAGGAAAGTGCTTTTTACCT	X	+	56593109-56593158	Xp11.1b	Homo sapiens ubiquilin 2 (UBQLN2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PLIC-2; PLIC2; CHAP1/DSK2; RIHFB2157; N4BP4; CHAP1; HRIHFB2157; LIC-2; Dsk2	PLIC-2; CHAP1; LIC-2; PLIC2; CHAP1/DSK2; RIHFB2157; N4BP4; HRIHFB2157; Dsk2
Homo sapiens	RefSeq	XM_927847.1	ILMN_39485	LOC644748	XM_927847.1	XM_927847.1		644748	89029635	XM_927847.1	LOC644748	XP_932940.1	ILMN_1720536	0007330020	S	55	GGACACAGACATACAGCAGGTAACACCCACCCCCAGGCAGCCCCTGAAGC	9	+	69885900-69885949		PREDICTED: Homo sapiens hypothetical protein LOC644748 (LOC644748), mRNA.					
Homo sapiens	RefSeq	XM_496950.2	ILMN_40726	LOC441320	XM_496950.2	XM_496950.2		441320	89027733	XM_496950.2	LOC441320	XP_496950.2	ILMN_1669532	0006550414	S	76	GCTCAAGGAGCGTCGGTGGAAGGCGGACAGGATGCTGAAGTTTTACAACG	8	-	7083438-7083487	8p23.1f	PREDICTED: Homo sapiens similar to seven transmembrane helix receptor (LOC441320), mRNA.					
Homo sapiens	RefSeq	XM_929208.1	ILMN_172659	KIF26B	NM_018012.3	NM_018012.3		55083	142370197	NM_018012.3	KIF26B	NP_060482.2	ILMN_1673620	0002810239	S	98	CGCTTTCCTCGTGGGGGAGCACGGACTGACTTGGCTGAAGAAAATGCCAG	1	+	243385007-243385056	1q44b-q44c	Homo sapiens kinesin family member 26B (KIF26B), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ10157; MGC35030	
Homo sapiens	RefSeq	NM_003413.2	ILMN_3993	ZIC3	NM_003413.2	NM_003413.2		7547	22547199	NM_003413.2	ZIC3	NP_003404.1	ILMN_1681805	0000670414	S	3792	AGGCTTAAGTACCTCCTTTAAGGGGCAATGCTCTAGGTTTTTGGTGGCAG	X	+	136481778-136481827	Xq26.3c	Homo sapiens Zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) (ZIC3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [pmid 9354794] [evidence TAS]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	HTX1; ZNF203; HTX	HTX1; ZNF203; HTX
Homo sapiens	RefSeq	XM_113912.5	ILMN_33873	LOC201140	XM_113912.5	XM_113912.5		201140	89041192	XM_113912.5	LOC201140	XP_113912.3	ILMN_1705124	0006420474	A	597	TGACTGCCTCCGAGCCGAAGTGGAGGAATACGATGTTGTCATCAGCACCG	17	-	9616880-9616929	17p13.1b	PREDICTED: Homo sapiens similar to CG7601-PA (LOC201140), mRNA.					
Homo sapiens	RefSeq	NM_138442.2	ILMN_10186	CCDC124	NM_138442.2	NM_138442.2		115098	34147541	NM_138442.2	CCDC124	NP_612451.1	ILMN_1811775	0002070537	S	741	ATGAACCAGCGGGCCGTGCCCTTCAATGCCCCCAAGTGAGCCCAGAACTT	19	+	17915486-17915524:17915525-17915535	19p13.11d	Homo sapiens coiled-coil domain containing 124 (CCDC124), mRNA.					
Homo sapiens	RefSeq	NM_138448.2	ILMN_14312	ACYP2	NM_138448.3	NM_138448.3		98	148277041	NM_138448.3	ACYP2	NP_612457.1	ILMN_1697550	0000130367	S	329	CGCCAAGCAGTCCCATGTGTCCCCTCCCTCTCGCAGCCGCCGCAGTCGCT	2	+	54196242-54196291	2p16.2a	Homo sapiens acylphosphatase 2, muscle type (ACYP2), mRNA.		The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 8268218] [evidence TAS]	Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [pmid 8268218] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ACYP; ACYM	ACYP; ACYM
Homo sapiens	RefSeq	NM_052854.1	ILMN_23950	CREB3L1	NM_052854.2	NM_052854.2		90993	116235452	NM_052854.2	CREB3L1	NP_443086.1	ILMN_1749032	0003060326	S	2299	ACCCAAACAGACACATCAACGCACCCCACTCACAGACACCCCTTACCCCA	11	+	46299177-46299226	11p11.2c	Homo sapiens cAMP responsive element binding protein 3-like 1 (CREB3L1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	OASIS	OASIS
Homo sapiens	RefSeq	NM_182525.1	ILMN_29909	C8ORF78	NM_182525.1	NM_182525.1		157376	32698879	NM_182525.1	C8orf78	NP_872331.1	ILMN_1753929	0005420411	S	1571	CAGCAATAGGACCTGGAATTAGCTGGAGGCTGGGTACAGTTGCAGGTTGC	8	-	125127620-125127669	8q24.13c	Homo sapiens chromosome 8 open reading frame 78 (C8orf78), mRNA.				FLJ32770; MGC126555; MGC126551	FLJ32770; MGC126555; MGC126551
Homo sapiens	RefSeq	NM_004048.2	ILMN_19648	B2M	NM_004048.2	NM_004048.2		567	37704380	NM_004048.2	B2M	NP_004039.1	ILMN_1725427	0004890487	S	402	GTGGGATCGAGACATGTAAGCAGCATCATGGAGGTTTGAAGATGCCGCAT	15	+	42795187-42795191:42795819-42795832:42795833-42795846:42797097-42797113	15q21.1a	Homo sapiens beta-2-microglobulin (B2M), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 15569716] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15304001] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11513152] [evidence EXP]; The lipid bilayer surrounding an early endosome [goid 31901] [pmid 15569716] [evidence EXP]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12118248] [evidence IPI]		
Homo sapiens	RefSeq	NM_004048.2	ILMN_19648	B2M	NM_004048.2	NM_004048.2		567	37704380	NM_004048.2	B2M	NP_004039.1	ILMN_2148459	0000240195	S	657	AGAGGTGGGGAGCAGAGAATTCTCTTATCCAACATCAACATCTTGGTCAG	15	+	42797319-42797368	15q21.1a	Homo sapiens beta-2-microglobulin (B2M), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 15569716] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15304001] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11513152] [evidence EXP]; The lipid bilayer surrounding an early endosome [goid 31901] [pmid 15569716] [evidence EXP]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12118248] [evidence IPI]		
Homo sapiens	RefSeq	NM_207503.1	ILMN_18717	FLJ42280	NM_207503.1	NM_207503.1		401388	46409633	NM_207503.1	FLJ42280	NP_997386.1	ILMN_1697691	0002490692	S	1939	GATCTGGGCAAGAGATATTTTAGAGGGCTCCACATACCACAATCACCCAC	7	-	95949592-95949641	7q21.3c	Homo sapiens FLJ42280 protein (FLJ42280), mRNA.					
Homo sapiens	RefSeq	NM_017422.3	ILMN_7150	CALML5	NM_017422.3	NM_017422.3		51806	38327636	NM_017422.3	CALML5	NP_059118.1	ILMN_1749118	0001690059	S	609	CTGCTTTTGTGCTGGGACTCTCCGGGGAAACCTGGTCGGTGGATGGGAAA	10	-	5530852-5530901	10p15.1c	Homo sapiens calmodulin-like 5 (CALML5), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10777582] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 10777582] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10777582] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CLSP	CLSP
Homo sapiens	RefSeq	NM_000834.3	ILMN_168614	GRIN2B	NM_000834.3	NM_000834.3		2904	167003330	NM_000834.3	GRIN2B	NP_000825.2	ILMN_3307714	0000130091	S	5793	GGCCAAGGTTTGGGGAAGAACGAAGCCACCTTTGAAGAAGTAAGGAGTCG	12	-	13714508-13714557	12p13.1b-p13.1a	Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate 2B (GRIN2B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8768735] [evidence TAS]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [pmid 10480938] [evidence IDA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD [goid 17146] [pmid 17047094] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [evidence IEA]; Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 8768735] [evidence TAS]; The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure [goid 7423] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [pmid 18445116] [evidence IDA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IEA]; The series of events involved in the perception of pain in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal [goid 50966] [evidence IEA]; Any process that modulates the establishment or extent of the excitatory postsynaptic potential (EPSP) which is a temporay increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential [goid 60079] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4972] [pmid 8768735] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17047094] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17997397] [evidence IPI]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [pmid 17047094] [evidence IDA]; Interacting selectively with a glutamate receptor [goid 35254] [evidence IEA]	MGC142180; NR2B; NMDAR2B; MGC142178; hNR3	MGC142180; NR2B; NMDAR2B; MGC142178; hNR3
Homo sapiens	RefSeq	NM_007073.3	ILMN_25159	BVES	NM_147147.2	NM_147147.2		11149	59939904	NM_147147.2	BVES	NP_671488.1	ILMN_1689237	0007210349	A	5138	TCACTGCTTCGGTTCTGCTCATCAGGGGACACGCTCCCTTACTCATGGCA	6	-	105651709-105651758	6q21a	Homo sapiens blood vessel epicardial substance (BVES), transcript variant 5, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10441744] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 10441744] [evidence NAS]		POPDC1; POP1; HBVES; MGC42413	POPDC1; POP1; HBVES; MGC42413
Homo sapiens	RefSeq	NM_147147.2	ILMN_25159	BVES	NM_147147.2	NM_147147.2		11149	59939904	NM_147147.2	BVES	NP_671488.1	ILMN_1702107	0000540241	I	67	GGGAACGGGTTGTTGGCCAGACAAGTCCCAGAAACTGCCTGCTTTGAAGC	6	-	105690798-105690847	6q21a	Homo sapiens blood vessel epicardial substance (BVES), transcript variant 5, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10441744] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 10441744] [evidence NAS]		POPDC1; POP1; HBVES; MGC42413	POPDC1; POP1; HBVES; MGC42413
Homo sapiens	RefSeq	XR_037026.1	ILMN_352205	LOC100128140	XR_037026.1	XR_037026.1		100128140	169210765	XR_037026.1	LOC100128140		ILMN_3272977	0002260022	M	473	GAGACTGGCAAGATGACCGATTTCATCACGTTCGACACTGGCAAGCCATA	17	-	507033-507082	17p13.3g	PREDICTED: Homo sapiens misc_RNA (LOC100128140), miscRNA.					
Homo sapiens	RefSeq	XR_018049.2	ILMN_163548	LOC392871	XR_018049.2	XR_018049.2		392871	169170204	XR_018049.2	LOC392871		ILMN_3241522	0004560673	S	354	CAGGTCTGGTTTGAGCTCACCTGCTACTCACTGGCCCCCCAGATAAAGGT	7	-	21311956-21312005		PREDICTED: Homo sapiens misc_RNA (LOC392871), miscRNA.					
Homo sapiens	RefSeq	NM_002300.3	ILMN_16800	LDHB	NM_002300.4	NM_002300.4		3945	142386935	NM_002300.4	LDHB	NP_002291.1	ILMN_1728132	0001400240	S	992	CCGGGGATTAACCAGCGTTATCAACCAGAAGCTAAAGGATGATGAGGTTG	12	-	21679804-21679853	12p12.1e	Homo sapiens lactate dehydrogenase B (LDHB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]	 [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA];  [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [pmid 8314553] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	LDH-H; TRG-5	LDH-H; TRG-5
Homo sapiens	RefSeq	XM_940231.1	ILMN_166476	LOC441617	XM_497310.3	XM_497310.3		441617	113422496	XM_497310.3	LOC441617	XP_497310.3	ILMN_1761445	0003870491	A	1530	GCTGGCACTCATCGGCCTCATCTTCCTCATGGTGCTCTACCTAAACCGCC	11	+	74630684-74630733	11q13.4c	PREDICTED: Homo sapiens similar to hCG1820409 (LOC441617), mRNA.					
Homo sapiens	Unigene	Hs.195033	ILMN_81301	HS.195033	Hs.195033		Hs.195033		15939254	BI827704			ILMN_1841133	0000840463	S	649	AGTGGGGGTGTGACCTGAGGAGATAAAGGAAGGACGACAGACCTGGGGAG	3	-	140139602-140139651		603074125F1 NIH_MGC_119 Homo sapiens cDNA clone IMAGE:5165863 5, mRNA sequence					
Homo sapiens	RefSeq	XM_941465.1	ILMN_45148	LOC652128	XM_941465.1	XM_941465.1		652128	89037917	XM_941465.1	LOC652128	XP_946558.1	ILMN_1684494	0006650020	S	1364	AGGAATAAGAGTCCCTGTTTCAGGCTTGGGTGCCTGAGTACACCTACTGG					PREDICTED: Homo sapiens similar to Ig heavy chain V-II region ARH-77 precursor (LOC652128), mRNA.					
Homo sapiens	RefSeq	XM_943902.1	ILMN_35084	LOC441097	XM_943902.2	XM_943902.2		441097	113417161	XM_943902.2	LOC441097	XP_948995.1	ILMN_1714286	0006350523	A	232	GTGTTGGAGAATGATCCGATTGGCCAGTGCAAGAGGGATTGCAGAGAAGA				5q15d	PREDICTED: Homo sapiens hypothetical LOC441097 (LOC441097), mRNA.					
Homo sapiens	RefSeq	XM_926815.1	ILMN_45079	LOC643495	XM_941175.2	XM_941175.2		643495	113422161	XM_941175.2	LOC643495	XP_946268.1	ILMN_1672044	0006110196	S	187	GCCATTCCTCTCCCGAGCACATTCCCCTAGAGAAGCTCTGCACGTGTGCA				10q26.3b	PREDICTED: Homo sapiens hypothetical LOC643495 (LOC643495), mRNA.					
Homo sapiens	RefSeq	NM_001005187.1	ILMN_29625	OR6T1	NM_001005187.1	NM_001005187.1		219874	52353277	NM_001005187.1	OR6T1	NP_001005187.1	ILMN_1744886	0006130017	S	780	TCGTATGTCAGAGGCTCAGTCCAAACTGCTCAACAAAGGTGCCTCCGTCC	11	-	123813716-123813765	11q24.1c	Homo sapiens olfactory receptor, family 6, subfamily T, member 1 (OR6T1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-277	OR11-277
Homo sapiens	RefSeq	XM_497110.3	ILMN_34014	LOC441495	XM_497110.3	XM_497110.3		441495	113429882	XM_497110.3	LOC441495	XP_497110.1	ILMN_3249349	0000730669	S	153	CAAGAGGTGGCTGGGTAGGTGGCGACGGAAGCGCCGCTGGCGGCGGGTCC	X	-	51442302-51442351	Xp11.22b	PREDICTED: Homo sapiens hypothetical LOC441495 (LOC441495), mRNA.					
Homo sapiens	RefSeq	NM_018418.1	ILMN_163094	SPATA7	NM_001040428.2	NM_001040428.2		55812	154091014	NM_001040428.2	SPATA7	NP_001035518.1	ILMN_1652409	0000380079	S	1731	TTAACACATCACCCTCCCAATCTGTTCAGTTCTCCAGTGTCAAAGGCGAC	14	+	87974395-87974444	14q31.3d	Homo sapiens spermatogenesis associated 7 (SPATA7), transcript variant 2, mRNA.				MGC102934; DKFZp686D07199; HSD3; HSD-3.1	MGC102934; HSD3; HSD-3.1
Homo sapiens	RefSeq	NM_014066.2	ILMN_16200	COMMD5	NM_014066.2	NM_014066.2		28991	19923429	NM_014066.2	COMMD5	NP_054785.2	ILMN_1662463	0005810168	S	2875	CACATGAACACAGACACGCAGGGAGAAGGCAGCCGTGTGAAGGAGTCGGA	8	-	146034356-146034405	8q24.3h	Homo sapiens COMM domain containing 5 (COMMD5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15799966] [evidence IPI]	HT002; HCARG; MGC72046	HT002; HCARG; MGC72046
Homo sapiens	RefSeq	XM_942170.1	ILMN_43904	LOC652625	XM_942170.1	XM_942170.1		652625	89073661	XM_942170.1	LOC652625	XP_947263.1	ILMN_1684584	0000940475	S	385	TGAAGTGTGAGGCCGAAGCCTGGAGAACGCTATGCGCCCAGGAAATGCAG					PREDICTED: Homo sapiens similar to Neutrophil cytosol factor 1 (NCF-1) (Neutrophil NADPH oxidase factor 1) (47 kDa neutrophil oxidase factor) (p47-phox) (NCF-47K) (47 kDa autosomal chronic granulomatous disease protein) (NOXO2) (LOC652625), mRNA.					
Homo sapiens	RefSeq	XM_001724148.1	ILMN_352222	LOC100133728	XM_001724148.1	XM_001724148.1		100133728	169218274	XM_001724148.1	LOC100133728	XP_001724200.1	ILMN_3248923	0003120288	S	42	GCGTGATCGGGCATTTCCAGTGTTTGAGCGTTATGGACTGAGCGCATCAC					PREDICTED: Homo sapiens hypothetical LOC100133728 (LOC100133728), mRNA.					
Homo sapiens	RefSeq	NM_152382.1	ILMN_35407	C2ORF60	NM_001039693.1	NM_001039693.1		129450	89242133	NM_001039693.1	C2orf60	NP_001034782.1	ILMN_1785955	0005690349	S	2127	CTAAAAGTGTTGTCATCGAAGACAGTGAGCCATTGTGTGTGGATCTCTGC	2	-	200504836-200504885	2q33.1d	Homo sapiens chromosome 2 open reading frame 60 (C2orf60), mRNA.				FLJ37953; MGC70509	MGC70509
Homo sapiens	RefSeq	NM_000489.2	ILMN_9682	ATRX	NM_000489.2	NM_000489.2		546	20336208	NM_000489.2	ATRX	NP_000480.2	ILMN_2334256	0003420156	A	9667	TTAAAGATAATACTTAGAAGGGTTAATTGGAAATCAGAGTTTGAAATAAA	X	-	76648462-76648511	Xq21.1a	Homo sapiens alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) (ATRX), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7874112] [evidence TAS]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [pmid 10570185] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 7697714] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10742099] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 7697714] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7697714] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 7697714] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12953102] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	XNP; ZNF-HX; MRXHF1; XH2; ATR2; SFM1; SHS; MRXS3; RAD54L; RAD54; MGC2094	XNP; ZNF-HX; MRXHF1; XH2; ATR2; SFM1; SHS; MRXS3; RAD54L; RAD54; MGC2094
Homo sapiens	RefSeq	NM_033419.3	ILMN_12215	PGAP3	NM_033419.3	NM_033419.3		93210	45505179	NM_033419.3	PGAP3	NP_219487.3	ILMN_1805636	0002000441	S	2501	CCGTGGTTGAAGCAGACTGGATTTTTGCTCTGCCCCTGACCCCTTGTCCC	17	-	37827511-37827560	17q12c	Homo sapiens post-GPI attachment to proteins 3 (PGAP3), mRNA.				CAB2; AGLA546; PP1498; MGC9753; PGAP3	CAB2; AGLA546; PP1498; MGC9753; PGAP3
Homo sapiens	RefSeq	XM_001726774.1	ILMN_338451	LOC100133405	XM_001726774.1	XM_001726774.1		100133405	169211956	XM_001726774.1	LOC100133405	XP_001726826.2	ILMN_3238466	0007160113	S	1	AGATGCAAAGTACTTTCTGCACTTCTCACGCCTGATTTTGGCTCATCCAT					PREDICTED: Homo sapiens hypothetical LOC100133405 (LOC100133405), mRNA.					
Homo sapiens	RefSeq	XM_001718069.1	ILMN_347996	LOC100131335	XM_001718069.1	XM_001718069.1		100131335	169165756	XM_001718069.1	LOC100131335	XP_001718121.1	ILMN_3214213	0006980368	A	406	GGAGAAAAAGGAAGGCGTGGGCGTCAGGGAAGTTCTAATGTTGATGGACC				3q21.3d	PREDICTED: Homo sapiens hypothetical protein LOC100131335 (LOC100131335), mRNA.					
Homo sapiens	RefSeq	XM_001718069.1	ILMN_347996	LOC100131335	XM_001718069.1	XM_001718069.1		100131335	169165756	XM_001718069.1	LOC100131335	XP_001718121.1	ILMN_3290715	0001510411	M	631	GGACCAAGAGGAGTGAAGGGAGAGATTGGTGATGTAGGAGAAAGAGGCCC				3q21.3d	PREDICTED: Homo sapiens hypothetical protein LOC100131335 (LOC100131335), mRNA.					
Homo sapiens	RefSeq	NM_152377.1	ILMN_17293	C1ORF87	NM_152377.1	NM_152377.1		127795	22748810	NM_152377.1	C1orf87	NP_689590.1	ILMN_1669805	0006220328	S	1555	GTGATCTGAGTAACACAGGAGTTCTGGAGAAGGAACGAGCCAGACGCCTC	1	-	60456473-60456505:60463281-60463297	1p32.1b	Homo sapiens chromosome 1 open reading frame 87 (C1orf87), mRNA.				FLJ44073; MGC34837	FLJ44073; MGC34837
Homo sapiens	RefSeq	NM_152377.1	ILMN_17293	C1ORF87	NM_152377.1	NM_152377.1		127795	22748810	NM_152377.1	C1orf87	NP_689590.1	ILMN_2097943	0007210477	S	1794	GTTTCTCCCCAGCCTAAGTGTAGTGGCGGAGGCATTGTCAGAGTGGAGGC	1	-	60456234-60456283	1p32.1b	Homo sapiens chromosome 1 open reading frame 87 (C1orf87), mRNA.				FLJ44073; MGC34837	FLJ44073; MGC34837
Homo sapiens	RefSeq	XM_932515.1	ILMN_37888	MIA3	XM_932515.2	XM_932515.2		375056	113411666	XM_932515.2	MIA3	XP_937608.2	ILMN_1672043	0004850246	I	5950	TGGAGCTGGAAAGCCTTTTCCAGCAGGGCAAGCACCTTAATTTTTATGGC	1	+	220904639-220904688	1q41e	PREDICTED: Homo sapiens melanoma inhibitory activity family, member 3, transcript variant 3 (MIA3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate, or extent of leukocyte migration [goid 2687] [pmid 17726152] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 17726152] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [pmid 17044017] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 17044017] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17726152] [evidence IPI]		
Homo sapiens	RefSeq	NM_033413.2	ILMN_15794	LRRC46	NM_033413.2	NM_033413.2		90506	34147462	NM_033413.2	LRRC46	NP_219481.1	ILMN_1768818	0006960204	S	1071	CTCCCACCAAGAAACCATGCAGTCTGATTCCCAGGGGCCACCAAAGCTCT	17	+	43269334-43269383	17q21.32b	Homo sapiens leucine rich repeat containing 46 (LRRC46), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC16309; FLJ23553	MGC16309; FLJ23553
Homo sapiens	RefSeq	NM_198434.1	ILMN_13382	AURKA	NM_198436.1	NM_198436.1		6790	38327569	NM_198436.1	AURKA	NP_940838.1	ILMN_1680955	0004730605	A	1981	GAATGCTGTGTGTCTGTCCGGCACCCCGGTAGGCCTGATTGGGTTTCTAG	20	-	54944638-54944687	20q13.2d-q13.31a	Homo sapiens aurora kinase A (AURKA), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9153231] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 9153231] [evidence TAS]	Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9153231] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [pmid 15504738] [evidence NAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 9153231] [evidence TAS]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [pmid 15987997] [evidence IMP]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15987997] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244051] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244051] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	STK15; STK7; AURA; AIK; BTAK; AURORA2; ARK1; MGC34538; STK6	STK15; STK7; AURA; AIK; BTAK; AURORA2; ARK1; MGC34538; STK6
Homo sapiens	RefSeq	XM_927938.1	ILMN_39559	LOC644843	XM_927938.1	XM_927938.1		644843	89035422	XM_927938.1	LOC644843	XP_933031.1	ILMN_1668377	0002260358	S	61	GTGACCACCCCAGTCACCCCCTTATCCAAAAAGACTATTGATATAATTAG	12	+	17343774-17343823		PREDICTED: Homo sapiens hypothetical protein LOC644843 (LOC644843), mRNA.					
Homo sapiens	RefSeq	XM_001719242.1	ILMN_347746	LOC284297	XM_001719242.1	XM_001719242.1		284297	169214108	XM_001719242.1	LOC284297	XP_001719294.1	ILMN_3290428	0000840477	M	4422	GGAGCTGGTGGCTGCTGTGAGGGATGTGGGTGGTCAGCTGCAGAGACTGA				19q13.42c	PREDICTED: Homo sapiens hypothetical LOC284297 (LOC284297), mRNA.					
Homo sapiens	RefSeq	NM_172200.1	ILMN_14835	IL15RA	NM_002189.2	NM_002189.2		3601	26787980	NM_002189.2	IL15RA	NP_002180.1	ILMN_1665682	0000940356	A	1113	CCCAGGGCCCAGCTTCCCAGGAGAGACCAAAGGCTTCTGAGCAGGATTTT	10	-	6034787-6034836	10p15.1b	Homo sapiens interleukin 15 receptor, alpha (IL15RA), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8530383] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8530383] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [pmid 7641685] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16284400] [evidence IPI]	MGC104179	MGC104179
Homo sapiens	RefSeq	NM_002189.2	ILMN_14835	IL15RA	NM_002189.2	NM_002189.2		3601	26787980	NM_002189.2	IL15RA	NP_002180.1	ILMN_1693910	0004200653	I	40	CGCTCGCCCGGGGAGTCCAGCGGTGTCCTGTGGAGCTGCCGCCATGGCCC	10	-	6059454-6059461:6059462-6059503	10p15.1b	Homo sapiens interleukin 15 receptor, alpha (IL15RA), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8530383] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8530383] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [pmid 7641685] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16284400] [evidence IPI]	MGC104179	MGC104179
Homo sapiens	RefSeq	NM_001012452.1	ILMN_168609	FLJ32679	NM_001012452.1	NM_001012452.1		440321	60218905	NM_001012452.1	FLJ32679	NP_001012455.1	ILMN_2109536	0005390349	S	2332	GGCCGAGAACTGGAAACAGCCTTTCCCTCATTTTCTGTGTATTGGTGATG	15	+	79936-79985		Homo sapiens golgin-like hypothetical protein LOC440321 (FLJ32679), mRNA.				MGC102859; MGC104696	MGC102859; MGC104696
Homo sapiens	RefSeq	NM_033057.1	ILMN_175134	OR2B2	NM_033057.1	NM_033057.1		81697	14780899	NM_033057.1	OR2B2	NP_149046.1	ILMN_1730728	0007040551	S	763	GCTATCTCCATGTACCTGCAACCACCTTCACCCAGCTCCAAAGACCGGGG	6	-	27987264-27987313	6p22.1c	Homo sapiens olfactory receptor, family 2, subfamily B, member 2 (OR2B2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	dJ193B12.4; OR6-1; hs6M1-10; OR2B2Q; OR2B9	dJ193B12.4; OR6-1; hs6M1-10; OR2B2Q; OR2B9
Homo sapiens	RefSeq	NM_003112.3	ILMN_8014	SP4	NM_003112.3	NM_003112.3		6671	67010024	NM_003112.3	SP4	NP_003103.2	ILMN_1721081	0000990343	S	5254	GCAGTAGAGTCTTGTTTAATGGCATTTCACTGTTCATTCCCTTTACCACC	7	+	21518042-21518091	7p15.3d	Homo sapiens Sp4 transcription factor (SP4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 12560508] [evidence IDA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7559627] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 7559627] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC130009; SPR-1; HF1B; MGC130008	MGC130009; SPR-1; HF1B; MGC130008
Homo sapiens	RefSeq	XM_942450.1	ILMN_45308	LOC652790	XM_942450.1	XM_942450.1		652790	89077522	XM_942450.1	LOC652790	XP_947543.1	ILMN_1733783	0006590239	S	8	TATCCTCAGTGCATTTTTCGGATGTCGGGGGTGATATGTGTGTGCACGCC					PREDICTED: Homo sapiens similar to anaphase promoting complex subunit 1 (LOC652790), mRNA.					
Homo sapiens	RefSeq	NM_032016.2	ILMN_16121	STARD3NL	NM_032016.2	NM_032016.2		83930	31543655	NM_032016.2	STARD3NL	NP_114405.1	ILMN_2228873	0005550360	S	921	GAGTCTCCCTGTCGACAGTAAAGTTGAAATGGTGACGTCCACTGCTGGCT	7	+	38234958-38234980:38234981-38234997:38236049-38236058	7p14.1e	Homo sapiens STARD3 N-terminal like (STARD3NL), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]			MGC3251; MENTHO	MGC3251; MENTHO
Homo sapiens	RefSeq	XR_037418.1	ILMN_344975	LOC100128416	XR_037418.1	XR_037418.1		100128416	169216447	XR_037418.1	LOC100128416		ILMN_3264462	0001070349	M	753	GGCAAGAGCTGTTAACCCTTCTAGAAGCTCTGTGTGTGCAGTTGGGTGAG				Xq26.3c	PREDICTED: Homo sapiens misc_RNA (LOC100128416), miscRNA.					
Homo sapiens	RefSeq	NM_022444.3	ILMN_7888	SLC13A1	NM_022444.3	NM_022444.3		6561	32967608	NM_022444.3	SLC13A1	NP_071889.2	ILMN_1802131	0004880706	S	3355	CTTTGCTATTTTTAATCTTCGTTGGCACTTTCCAGCTGTTACTGACCTTG	7	-	122753980-122754029	7q31.32b	Homo sapiens solute carrier family 13 (sodium/sulfate symporters), member 1 (SLC13A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NaSi-1; NAS1	NaSi-1; NAS1
Homo sapiens	RefSeq	NM_022444.3	ILMN_7888	SLC13A1	NM_022444.3	NM_022444.3		6561	32967608	NM_022444.3	SLC13A1	NP_071889.2	ILMN_2204430	0006270544	S	3331	GCCATTCTCCTGCCTCAGCCAAACCTTTGCTATTTTTAATCTTCGTTGGC	7	-	122754004-122754053	7q31.32b	Homo sapiens solute carrier family 13 (sodium/sulfate symporters), member 1 (SLC13A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NaSi-1; NAS1	NaSi-1; NAS1
Homo sapiens	RefSeq	NM_001672.2	ILMN_4129	ASIP	NM_001672.2	NM_001672.2		434	21327679	NM_001672.2	ASIP	NP_001663.2	ILMN_1791647	0003460474	S	511	GCGGAGGTTCCAGGAGATGGGACTTCAGGGAGACCTGGCTTGGGCTAAAA	20	+	32320736-32320785	20q11.22a	Homo sapiens agouti signaling protein, nonagouti homolog (mouse) (ASIP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7937887] [evidence TAS]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 7937887] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7757071] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7757071] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IEA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IEA]; The chemical reactions and pathways resulting in the formation of melanins, pigments largely of animal origin. High molecular weight polymers of indole quinone, they are irregular polymeric structures and are divided into three groups: allomelanins in the plant kingdom and eumelanins and phaeomelanins in the animal kingdom [goid 42438] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 7757071] [evidence TAS]	ASP; MGC126092; SHEP9; AGTIL; MGC126093; AGSW; AGTI	ASP; MGC126092; SHEP9; AGTIL; MGC126093; AGSW; AGTI
Homo sapiens	RefSeq	NM_177553.1	ILMN_28250	GAS2	NM_005256.2	NM_005256.2		2620	29540560	NM_005256.2	GAS2	NP_005247.1	ILMN_1804569	0002900338	A	1864	CTAATGATGTTACAGACTTACGTATACCCTTGTATACCTGGGACAGGGCT	11	+	22790999-22791048	11p14.3d-p14.3c	Homo sapiens growth arrest-specific 2 (GAS2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [pmid 1607387] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9521882] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]		MGC32610	MGC32610
Homo sapiens	RefSeq	XM_936095.1	ILMN_34449	LOC646317	XM_929254.1	XM_929254.1		646317	88992623	XM_929254.1	LOC646317	XP_934347.1	ILMN_1668971	0004810221	S	121	ATGGTCCTTATCCTGCTGCCATTACTGGATAAACATCTCCAAACCCCCAT	6	-	29339665-29339714	6p22.1a	PREDICTED: Homo sapiens similar to olfactory receptor 42 (LOC646317), mRNA.					
Homo sapiens	RefSeq	NM_005095.2	ILMN_26259	ZMYM4	NM_005095.2	NM_005095.2		9202	44890067	NM_005095.2	ZMYM4	NP_005086.2	ILMN_1688404	0007380372	S	6678	CTGTATCAGGATTTCATTTGCATGTTAGTCCACAGAGTTGCCCAGAACCC	1	+	35659816-35659865	1p34.3e	Homo sapiens zinc finger, MYM-type 4 (ZMYM4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10486218] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10486218] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0425; DKFZp686B09210; CDIR; ZNF198L3; DKFZp686L0547; ZNF262; MYM	KIAA0425; DKFZp686B09210; CDIR; ZNF198L3; DKFZp686L0547; ZNF262; MYM
Homo sapiens	RefSeq	NM_031895.4	ILMN_170570	CACNG8	NM_031895.4	NM_031895.4		59283	24586685	NM_031895.4	CACNG8	NP_114101.4	ILMN_2106874	0004640519	S	1331	GCCGCCGCCTCCAACACCAACACGCTCAACAGGAAAACCACGCCTGTGTA	19	+	54486053-54486102	19q13.42a	Homo sapiens calcium channel, voltage-dependent, gamma subunit 8 (CACNG8), mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 11170751] [evidence NAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 11170751] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 11170751] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	Unigene	Hs.552082	ILMN_110820	HS.552082	Hs.552082		Hs.552082		23282818	BU616603			ILMN_1894388	0003390367	S	510	TGGTGGTGGCAGTGGCAGTGAAGAGTACACTATATTTCGCCAAGGGGGTC	4	-	99583471-99583520		UI-H-FH1-bfi-p-18-0-UI.s1 NCI_CGAP_FH1 Homo sapiens cDNA clone UI-H-FH1-bfi-p-18-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_928912.1	ILMN_17678	DCDC5	NM_198462.2	NM_198462.2		196296	122114655	NM_198462.2	DCDC5	NP_940864.2	ILMN_1729962	0003990630	S	4325	GCCTTGGCCAGGCCTCTCAGAATTGAGTGAGCGTGTGACTCCATTTGCAC	11	-	30843148-30843197	11p14.1a-p13f	Homo sapiens doublecortin domain containing 5 (DCDC5), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		FLJ46154; KIAA1493	
Homo sapiens	RefSeq	NM_198462.2	ILMN_17678	DCDC5	NM_198462.2	NM_198462.2		196296	122114655	NM_198462.2	DCDC5	NP_940864.2	ILMN_2209671	0005220408	S	3982	GTCACCATCCACGAAGCTGCTGTCTCTGGCACATCTCCACAATTAACTCC	11	-	30856702-30856706:30856707-30856751	11p14.1a-p13f	Homo sapiens doublecortin domain containing 5 (DCDC5), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		FLJ46154; KIAA1493	KIAA1493
Homo sapiens	RefSeq	NM_001007524.1	ILMN_4937	F8A3	NM_001007524.1	NM_001007524.1		474384	56090585	NM_001007524.1	F8A3	NP_001007525.1	ILMN_1748092	0004260706	S	209	AGCTGGCGGTGGCGCGCTGCCAGCAGGCGCTCTTCCACGGGCCCGGGGAG	X	-	154688003-154688052	Xq28h	Homo sapiens coagulation factor VIII-associated (intronic transcript) 3 (F8A3), mRNA.					
Homo sapiens	RefSeq	NM_001007524.1	ILMN_4937	F8A3	NM_001007524.1	NM_001007524.1		474384	56090585	NM_001007524.1	F8A3	NP_001007525.1	ILMN_1727984	0007050195	S	149	TCGGACAGCTGGGCCGGGAGCTGCGCGCCCAGGAGTGTCTGCCCTACGCG	X	-	154688063-154688112	Xq28h	Homo sapiens coagulation factor VIII-associated (intronic transcript) 3 (F8A3), mRNA.					
Homo sapiens	RefSeq	XM_944788.1	ILMN_32510	GPR125	XM_944788.1	XM_944788.1		166647	88979520	XM_944788.1	GPR125	XP_949881.1	ILMN_1722316	0004290767	I	2158	TTGGGGGAGTATGGCTTCCTACCTACTGCGGACCACCTGTCAACTCTGGG				4p15.31b	PREDICTED: Homo sapiens G protein-coupled receptor 125, transcript variant 3 (GPR125), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_001128885.2	ILMN_177657	LOC728951	XM_001128885.2	XM_001128885.2		728951	169211114	XM_001128885.2	LOC728951	XP_001128885.1	ILMN_3251711	0000520079	S	405	TGAGCTGCACACCCCCAACCTGCTGCCAGCTGCACCACGCCGAGGCCTCC	17	+	94292-94341		PREDICTED: Homo sapiens hypothetical LOC728951 (LOC728951), mRNA.					
Homo sapiens	Unigene	Hs.543905	ILMN_107411	HS.543905	Hs.543905		Hs.543905		6400108	AW168583			ILMN_1911501	0000130692	S	149	GAAACTGTGGGGTTCATTAATTGCAGTGATGTGAAGGGTCCTGACAGCAC	5	-	133460673-133460722		xi89f08.x1 NCI_CGAP_Mel3 Homo sapiens cDNA clone IMAGE:2652999 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001017520.1	ILMN_26599	DNTT	NM_001017520.1	NM_001017520.1		1791	63054851	NM_001017520.1	DNTT	NP_001017520.1	ILMN_2384001	0007200520	A	1455	GCCATCCGTGTGGATTTAGTTCTGTGCCCCTACGAGCGTCGTGCCTTTGC	10	+	98077252-98077301	10q24.1a	Homo sapiens deoxynucleotidyltransferase, terminal (DNTT), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The covalent alteration of one or more nucleotide sites in DNA, resulting in a change in its properties [goid 6304] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 3912] [pmid 2863268] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TDT	TDT
Homo sapiens	RefSeq	NM_001017520.1	ILMN_26599	DNTT	NM_001017520.1	NM_001017520.1		1791	63054851	NM_001017520.1	DNTT	NP_001017520.1	ILMN_1746515	0006280243	A	1940	TGTCACTGGTGGCTCATTCAGGGAAGCTCATCAAAGCCCACTTTGTTCGC	10	+	98079127-98079147:98080375-98080403	10q24.1a	Homo sapiens deoxynucleotidyltransferase, terminal (DNTT), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The covalent alteration of one or more nucleotide sites in DNA, resulting in a change in its properties [goid 6304] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 3912] [pmid 2863268] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TDT	TDT
Homo sapiens	RefSeq	NM_014752.1	ILMN_4035	SPCS2	NM_014752.1	NM_014752.1		9789	7661907	NM_014752.1	SPCS2	NP_055567.1	ILMN_1809488	0001430010	S	444	CAGGAATGGATCCTGATGATATTTGGCAGCTGTCCTCCAGTCTTAAAAGG	11	+	74358344-74358392:74365550-74365550	11q13.4c	Homo sapiens signal peptidase complex subunit 2 homolog (S. cerevisiae) (SPCS2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A multi subunit protease complex located in the endoplasmic reticulum membrane that cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space [goid 5787] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC117366; KIAA0102	MGC117366; KIAA0102
Homo sapiens	RefSeq	NM_014752.1	ILMN_4035	SPCS2	NM_014752.1	NM_014752.1		9789	7661907	NM_014752.1	SPCS2	NP_055567.1	ILMN_2213247	0001090121	S	1211	CTTTCTGCCTGTTACATTTTTGCTTTTAACCAATTAAAGAAGCCAATGGC	11	+	74366268-74366317	11q13.4c	Homo sapiens signal peptidase complex subunit 2 homolog (S. cerevisiae) (SPCS2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A multi subunit protease complex located in the endoplasmic reticulum membrane that cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space [goid 5787] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC117366; KIAA0102	MGC117366; KIAA0102
Homo sapiens	RefSeq	NM_153695.2	ILMN_23631	ZNF367	NM_153695.2	NM_153695.2		195828	46195795	NM_153695.2	ZNF367	NP_710162.1	ILMN_2200880	0006480176	S	1386	ACTGGGGCGCCACTCCGACAGTAGCTTGGACACTGACTCTTCCACTGTAC	9	-	98190312-98190339:98190340-98190361	9q22.32b-q22.33a	Homo sapiens zinc finger protein 367 (ZNF367), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15344908] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 15344908] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 15344908] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZFF29; CDC14B; FLJ33970	ZFF29; CDC14B; FLJ33970
Homo sapiens	RefSeq	NM_016111.1	ILMN_6086	TELO2	NM_016111.2	NM_016111.2		9894	141803574	NM_016111.2	TELO2	NP_057195.1	ILMN_1685079	0000240750	S	3190	ATGGGCTCGTGGGGCGGGATGGGACAGGGCACGGGCTCTCAGAAAATAAA	16	+	1500393-1500442	16p13.3e	Homo sapiens TEL2, telomere maintenance 2, homolog (S. cerevisiae) (TELO2), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18160036] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18160036] [evidence IPI]	DKFZp434A073; FLJ10924; KIAA0683; hCLK2; c305C8.3	DKFZp434A073; FLJ10924; KIAA0683; hCLK2; c305C8.3
Homo sapiens	RefSeq	XM_001722090.1	ILMN_338857	LOC100128130	XM_001722090.1	XM_001722090.1		100128130	169162949	XM_001722090.1	LOC100128130	XP_001722142.1	ILMN_3257482	0005700553	M	699	CTGCCACAGGGACCATGGGACATGATTGAAGAACCACTCCAGTGCAGTTG	2	-	111712005-111712054	2q13c	PREDICTED: Homo sapiens hypothetical protein LOC100128130 (LOC100128130), mRNA.					
Homo sapiens	RefSeq	NM_201262.1	ILMN_18576	DNAJC12	NM_201262.1	NM_201262.1		56521	41406093	NM_201262.1	DNAJC12	NP_957714.1	ILMN_1725773	0006900538	I	466	GTGGGTTTCTCGCTGGGTGCGACGTGAATTTGTGAAGCTCAGGATGCCCA	10	-	69571231-69571254:69571255-69571280	10q21.3d	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 12 (DNAJC12), transcript variant 2, mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	RP11-57G10.2; JDP1	RP11-57G10.2; JDP1
Homo sapiens	RefSeq	NM_201262.1	ILMN_18576	DNAJC12	NM_201262.1	NM_201262.1		56521	41406093	NM_201262.1	DNAJC12	NP_957714.1	ILMN_2311020	0006420736	A	399	CTGGCGAAGGAGCCAGATGTCGATGCCATTCCAGCAGTGGGAAGCTTTGA	10	-	69571298-69571347	10q21.3d	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 12 (DNAJC12), transcript variant 2, mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	RP11-57G10.2; JDP1	RP11-57G10.2; JDP1
Homo sapiens	RefSeq	NM_006925.2	ILMN_34497	SFRS5	NM_006925.3	NM_006925.3		6430	86991439	NM_006925.3	SFRS5	NP_008856.2	ILMN_1761996	0004730543	S	919	TCGCCAGAGGTCCCGGTCCCGATCAAGGTCCAGATCAGTTGACAGTGGCA	14	+	69307877-69307926	14q24.2a	Homo sapiens splicing factor, arginine/serine-rich 5 (SFRS5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [pmid 7556075] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12762840] [evidence IPI]	SRP40; HRS	SRP40; HRS
Homo sapiens	RefSeq	NM_006925.3	ILMN_34497	SFRS5	NM_006925.3	NM_006925.3		6430	86991439	NM_006925.3	SFRS5	NP_008856.2	ILMN_2378868	0006380445	A	1106	TGGGCTGGATATCTTTGTAGATGTGGACCACCAAGGGGTTGTTGAAAACT	14	+	69308064-69308113	14q24.2a	Homo sapiens splicing factor, arginine/serine-rich 5 (SFRS5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [pmid 7556075] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12762840] [evidence IPI]	SRP40; HRS	SRP40; HRS
Homo sapiens	RefSeq	NM_005071.1	ILMN_24739	SLC1A6	NM_005071.1	NM_005071.1		6511	4827011	NM_005071.1	SLC1A6	NP_005062.1	ILMN_2171471	0004610689	S	1508	TGACCGGCTTCGCACAATGACCAACGTACTGGGGGACTCAATTGGAGCGG	19	-	15061152-15061201	19p13.12b	Homo sapiens solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 (SLC1A6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7791878] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7791878] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 7791878] [evidence TAS]; The directed movement of aspartate, the anion of aspartic acid, into, out of, within or between cells [goid 15810] [pmid 7791878] [evidence TAS]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [pmid 7791878] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of L-aspartate from one side of a membrane to the other. L-aspartate is the anion derived from aspartic acid [goid 15183] [pmid 7791878] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]	MGC33092; EAAT4; MGC43671	MGC33092; EAAT4; MGC43671
Homo sapiens	RefSeq	NM_014149.2	ILMN_20547	WDR91	NM_014149.2	NM_014149.2		29062	40254872	NM_014149.2	WDR91	NP_054868.2	ILMN_1652223	0007150367	S	2756	GGAGCCAGGTCAGCTCTCTGTCTGTTCTGCTGGGTAACAAGGTTTGGCAG	7	-	134520898-134520947	7q33b	Homo sapiens WD repeat domain 91 (WDR91), mRNA.				HSPC049	HSPC049
Homo sapiens	RefSeq	XM_927618.1	ILMN_40305	LOC644491	XM_927618.1	XM_927618.1		644491	88978340	XM_927618.1	LOC644491	XP_932711.1	ILMN_1714014	0007550273	S	10	CGCCAACACGGGCACATGCAGTTCTGCCTCAAGGTGGGTAAAGCTACACG	4	-	189556975-189557024	4q35.2c	PREDICTED: Homo sapiens similar to NMDA receptor regulated 2 isoform a (LOC644491), mRNA.					
Homo sapiens	RefSeq	NM_001013436.1	ILMN_2450	MPST	NM_001013436.1	NM_001013436.1		4357	61835203	NM_001013436.1	MPST	NP_001013454.1	ILMN_1764596	0004570379	A	733	GGCATTGAACCTGGCCACATCCCAGGTACCGTGAACATCCCCTTCACAGA	22	+	35750797-35750797:35755203-35755251	22q12.3d	Homo sapiens mercaptopyruvate sulfurtransferase (MPST), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid [goid 9440] [pmid 9070219] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 9070219] [evidence TAS]	Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [pmid 9070219] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3-mercaptopyruvate + cyanide = pyruvate + thiocyanate [goid 16784] [evidence IEA]	MGC24539; TST2; MST	MGC24539; TST2; MST
Homo sapiens	RefSeq	NM_018121.3	ILMN_24540	FAM178A	NM_018121.3	NM_018121.3		55719	150456435	NM_018121.3	FAM178A	NP_060591.3	ILMN_3233135	0007330563	I	6981	GGGGATGACTGTGGTGGTTTGTCGCTAAGGAGGCAACAGTAGGGTCCAGG	10	+	102699945-102699954:102700423-102700462	10q24.31a	Homo sapiens family with sequence similarity 178, member A (FAM178A), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_018121.3	ILMN_24540	FAM178A	NM_018121.3	NM_018121.3		55719	150456435	NM_018121.3	FAM178A	NP_060591.3	ILMN_3189777	0000290735	A	277	CGGCTTCCTATTGCGCCACCACCGAAATGACCACCGTGCCAGCCAATCAA	10	+	102662592-102662641	10q24.31a	Homo sapiens family with sequence similarity 178, member A (FAM178A), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_001004754.1	ILMN_164372	OR51I2	NM_001004754.1	NM_001004754.1		390064	52317264	NM_001004754.1	OR51I2	NP_001004754.1	ILMN_1700540	0007650224	S	645	CCTCTCCTATGTGCTCATTCTGCGTTCTGTCATGGCCACTGCTTCCCGTG	11	+	5431939-5431988	11p15.4c	Homo sapiens olfactory receptor, family 51, subfamily I, member 2 (OR51I2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11121057] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 11121057] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 11121057] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-38	OR11-38
Homo sapiens	RefSeq	NM_024704.3	ILMN_30160	KIF16B	NM_024704.3	NM_024704.3		55614	41327690	NM_024704.3	KIF16B	NP_078980.3	ILMN_2152828	0002900370	S	4825	CTCCCAAATCTAAATGGCTACTGTGCATTCTTGAGCTTTTTCTGCTAAGC	20	-	16358568-16358617	20p12.1b	Homo sapiens kinesin family member 16B (KIF16B), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SNX23; KISC20ORF	SNX23; KISC20ORF
Homo sapiens	RefSeq	NM_024704.3	ILMN_30160	KIF16B	NM_024704.3	NM_024704.3		55614	41327690	NM_024704.3	KIF16B	NP_078980.3	ILMN_1772786	0003610592	S	4395	TCGTCCCCTGTGGCAAGATAGATGTGGTTGGGCCATCGTGGGTTCCCTGA	20	-	16359820-16359869	20p12.1b	Homo sapiens kinesin family member 16B (KIF16B), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SNX23; KISC20ORF	SNX23; KISC20ORF
Homo sapiens	RefSeq	XM_939401.1	ILMN_38853	LOC442057	XM_939401.1	XM_939401.1		442057	88958078	XM_939401.1	LOC442057	XP_944494.1	ILMN_1677797	0005390452	A	342	AATTGGGGTTGTGGCTCCCCCTGCTAAAGCGACATTACCCACGGACCTTG					PREDICTED: Homo sapiens similar to Ciliary dynein heavy chain 11 (Axonemal beta dynein heavy chain 11) (LOC442057), mRNA.					
Homo sapiens	Unigene	Hs.55246	ILMN_73050	HS.55246	Hs.55246		Hs.55246		27878817	BX112170			ILMN_1836570	0005960369	S	625	TCTGGCAACGATGTCTTTGATGTGTGACACATTCTTGCTGGAATCCAGCC	6	+	75035710-75035759		BX112170 Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone IMAGp998O07742, mRNA sequence					
Homo sapiens	RefSeq	NM_001040065.1	ILMN_174871	FAM75A2	NM_001040065.1	NM_001040065.1		642265	91206405	NM_001040065.1	FAM75A2	NP_001035154.1	ILMN_2150446	0005720095	S	4077	GGTCAGTCACAAATTCTTTTTTAGCCTTCCCTGGAGAAAAAGAAGTCCCC	9	+	39881061-39881110	9p13.1a	Homo sapiens family with sequence similarity 75, member A2 (FAM75A2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_001721919.1	ILMN_343600	LOC100131164	XM_001721919.1	XM_001721919.1		100131164	169211316	XM_001721919.1	LOC100131164	XP_001721971.1	ILMN_3285762	0000010681	M	47	TCCTCAACTCCATCTAAACTGAATCTTGGGGAGAACCCAGATCTGACCAA				17q21.31c	PREDICTED: Homo sapiens similar to anion exchanger (LOC100131164), mRNA.					
Homo sapiens	RefSeq	NM_176805.1	ILMN_19324	MRPS11	NM_176805.1	NM_176805.1		64963	28872739	NM_176805.1	MRPS11	NP_789775.1	ILMN_2405915	0005860626	A	618	TGAAAGGCCTGGGGCCAGGACGCTTGTCTGCCATGCACGGACTGATCATG	15	+	86821264-86821289:86822107-86822130	15q25.3d	Homo sapiens mitochondrial ribosomal protein S11 (MRPS11), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The series of events required to receive a stimulus indicating DNA damage has occurred and convert it to a molecular signal [goid 42769] [pmid 15300802] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	HCC-2; FLJ22512; FLJ23406	HCC-2; FLJ23406; FLJ22512
Homo sapiens	RefSeq	NM_176805.1	ILMN_19324	MRPS11	NM_176805.1	NM_176805.1		64963	28872739	NM_176805.1	MRPS11	NP_789775.1	ILMN_1722905	0000830379	A	867	AAGGGAGAGTTTTGCCTCCTTACACAGTGGCCTTTGCTTGCACCTCCAGC	15	+	86822330-86822379	15q25.3d	Homo sapiens mitochondrial ribosomal protein S11 (MRPS11), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The series of events required to receive a stimulus indicating DNA damage has occurred and convert it to a molecular signal [goid 42769] [pmid 15300802] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	HCC-2; FLJ22512; FLJ23406	HCC-2; FLJ23406; FLJ22512
Homo sapiens	RefSeq	NM_023079.2	ILMN_17384	UBE2Z	NM_023079.3	NM_023079.3		65264	150417998	NM_023079.3	UBE2Z	NP_075567.2	ILMN_1743086	0006020022	I	364	TCCGACTGGGACGGCGAGCGCACCGCGCCGCAGTGTCTACTCCGGATCAA	17	+	44341129-44341178	17q21.32c	Homo sapiens ubiquitin-conjugating enzyme E2Z (UBE2Z), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	HOYS7; FLJ13855; USE1	HOYS7; FLJ13855
Homo sapiens	RefSeq	NM_023079.2	ILMN_17384	UBE2Z	NM_023079.3	NM_023079.3		65264	150417998	NM_023079.3	UBE2Z	NP_075567.2	ILMN_1692168	0004860458	A	2700	GGGCTTGGGGAACGGAAGTTTATCTTGGATACCCTTGAAGAGGCTGGGTC	17	+	44361031-44361080	17q21.32c	Homo sapiens ubiquitin-conjugating enzyme E2Z (UBE2Z), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	HOYS7; FLJ13855; USE1	HOYS7; FLJ13855
Homo sapiens	RefSeq	XR_016369.2	ILMN_175327	LOC643219	XR_016369.2	XR_016369.2		643219	169163309	XR_016369.2	LOC643219		ILMN_3206242	0004210079	A	1516	ACTGAGCTGTCATGTCCTGAGTGCCAGTGTGGGGAGCTCTGCGGTGATGA	2	+	95828547-95828569:95829219-95829245	2q11.2a	PREDICTED: Homo sapiens misc_RNA (LOC643219), miscRNA.					
Homo sapiens	RefSeq	NM_001045556.1	ILMN_184039	SLA	NM_001045556.1	NM_001045556.1		6503	113930753	NM_001045556.1	SLA	NP_001039021.1	ILMN_2291954	0001400373	I	631	TAGCATGGGCTGCTTCTCCACAACCGCGAGAAGCCCGGCTGCCTGTTTAT	8	-	134156378-134156427	8q24.22c	Homo sapiens Src-like-adaptor (SLA), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 7543898] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLA1; SLAP	SLA1; SLAP
Homo sapiens	RefSeq	NM_001006605.1	ILMN_28358	FAM69A	NM_001006605.2	NM_001006605.2		388650	141801724	NM_001006605.2	FAM69A	NP_001006606.1	ILMN_1682577	0005290646	S	501	GGACCAGCACCGGTAATTGTGCCAAACTTTTGCGAAGCACTGCTCCAGAC	1	-	93071130-93071164:93071165-93071179	1p22.1c	Homo sapiens family with sequence similarity 69, member A (FAM69A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ23493	FLJ23493
Homo sapiens	RefSeq	NM_199283.4	ILMN_11288	LOC220686	NM_199283.4	NM_199283.4		220686	51988877	NM_199283.4	LOC220686	NP_954977.2	ILMN_1674768	0004480753	S	1756	TGTGTCCAGGCTACCTGGCTGTGCGGCACAGGTTTAGCCCCAACATGACT	22	-	20158944-20158946:20158947-20158969:20160291-20160314	22q11.21f	Homo sapiens hypothetical protein LOC220686 (LOC220686), mRNA.					
Homo sapiens	RefSeq	XM_927836.1	ILMN_137843	LOC493754	XM_927836.1	XM_927836.1		493754	89025119	XM_927836.1	LOC493754	XP_932929.1	ILMN_1682711	0000510768	A	1181	TCACTTTGCATCAGGGAGCACAAGGACCAGGCCGTACAGACACTCCGCCT	7	-	65656828-65656877	7q11.21e	PREDICTED: Homo sapiens hypothetical LOC493754 (LOC493754), mRNA.					
Homo sapiens	RefSeq	XM_001714697.1	ILMN_335126	LOC653458	XM_001714697.1	XM_001714697.1		653458	169177420	XM_001714697.1	LOC653458	XP_001714749.1	ILMN_3235803	0007320075	S	1083	GGTGATGCTAACTTGGAACCACGATGCAGGCTCTAATCTCCTCTACAATC	9	+	66796081-66796130	9q12g	PREDICTED: Homo sapiens similar to Ribosome biogenesis protein BMS1 homolog (LOC653458), mRNA.					
Homo sapiens	RefSeq	XM_496062.2	ILMN_181070	LOC727909	XM_001126407.1	XM_001126407.1		727909	113425120	XM_001126407.1	LOC727909	XP_001126407.1	ILMN_1776709	0005390762	S	2672	TAGAGTGTGTTTCATCTCTTCCGGTGCCAGGAATTAGCGGTGTATTATGG	15	+	28642671-28642720	15q13.2b	PREDICTED: Homo sapiens similar to Golgin subfamily A member 8-like protein 2, transcript variant 4 (LOC727909), mRNA.					
Homo sapiens	RefSeq	NM_058199.2	ILMN_18571	OLFM1	NM_058199.2	NM_058199.2		10439	34335282	NM_058199.2	OLFM1	NP_478106.1	ILMN_1729686	0001340609	I	933	GAGACACCTTGGCAAAGAGATGGCTGATTCTGGGTGGTCCTGGACATGGC	9	+	137108933-137108982	9q34.3a-q34.3b	Homo sapiens olfactomedin 1 (OLFM1), transcript variant 3, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9039501] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]	AMY; NOELIN1; NOE1; OlfA	AMY; NOELIN1; NOE1; OlfA
Homo sapiens	RefSeq	NM_013416.2	ILMN_7892	NCF4	NM_013416.2	NM_013416.2		4689	47519769	NM_013416.2	NCF4	NP_038202.1	ILMN_1757361	0006180168	I	1123	ACCCCACTTCCAGCCTGATGCCTCCTTACTCCAGCCTGTCACCCCCTTAG	22	+	35601967-35602016	22q12.3d	Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8280052] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8280052] [evidence IDA]; A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2 [goid 43020] [pmid 8280052] [evidence IDA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8280052] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 8839867] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [pmid 8280052] [evidence TAS]	SH3PXD4; P40PHOX; NCF; MGC3810	SH3PXD4; P40PHOX; MGC3810; NCF
Homo sapiens	RefSeq	XM_937423.1	ILMN_33252	LOC648370	XM_937423.1	XM_937423.1		648370	89025950	XM_937423.1	LOC648370	XP_942516.1	ILMN_1760020	0006580358	S	381	GAGAAAGCTGGAAAGGGCGAGGCAAGCACAGGGAACTAAGAAGCAGCCGC					PREDICTED: Homo sapiens hypothetical protein LOC648370 (LOC648370), mRNA.					
Homo sapiens	RefSeq	NR_001288.1	ILMN_3649	TFAMP1	NR_001288.1	NR_001288.1		260341	29171303	NR_001288.1	TFAMP1		ILMN_3251695	0000620541	S	1690	TGCCGGGTAGCTGGGACTAAGGCGTGCACCACCGTGCCTGGCTAATTTTT	7	+	1622321-1622370	7p22.3a	Homo sapiens transcription factor A, mitochondrial pseudogene 1 (TFAMP1), non-coding RNA.				TCF6L1; MTTF1	TCF6L1; MTTF1
Homo sapiens	RefSeq	NR_001288.1	ILMN_3649	TFAMP1	NR_001288.1	NR_001288.1		260341	29171303	NR_001288.1	TFAMP1		ILMN_2138689	0003130167	S	1579	TTTTTCTGGAGACAGAGTCTCGCCCTGTCGCCCAGGCTGGAGTGCAGTGG	7	+	1622210-1622259	7p22.3a	Homo sapiens transcription factor A, mitochondrial pseudogene 1 (TFAMP1), non-coding RNA.				TCF6L1; MTTF1	TCF6L1; MTTF1
Homo sapiens	RefSeq	NM_207475.1	ILMN_26186	FLJ90680	NM_207475.1	NM_207475.1		400926	46409571	NM_207475.1	FLJ90680	NP_997358.1	ILMN_1664926	0006040220	S	1516	AGCAGGTACAGCACAAAGTCAGGCAAGGCTCAGAGACCCAGGAGCTGGTT	22	-	35572625-35572674	22q12.3d	Homo sapiens FLJ90680 protein (FLJ90680), mRNA.					
Homo sapiens	RefSeq	NM_172194.1	ILMN_163013	OR4Q3	NM_172194.1	NM_172194.1		441669	53828745	NM_172194.1	OR4Q3	NP_751944.1	ILMN_2226403	0005720328	S	689	TCTGCCAGGGCCAGAACAAGGTCTTCTCTACCTGTGCTTCTCACCTGACA	14	+	19286115-19286164	14q11.2a	Homo sapiens olfactory receptor, family 4, subfamily Q, member 3 (OR4Q3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	c14_5008; OR4Q4; HSA6; OR14-3; C14orf13	c14_5008; OR4Q4; HSA6; OR14-3; C14orf13
Homo sapiens	RefSeq	NM_172194.1	ILMN_163013	OR4Q3	NM_172194.1	NM_172194.1		441669	53828745	NM_172194.1	OR4Q3	NP_751944.1	ILMN_1737373	0001030601	S	287	CAGGATGCCTGGCCCAGATCTACTTCCTCCACTTTCTAGGAGCCAGTGAG	14	+	19285713-19285762	14q11.2a	Homo sapiens olfactory receptor, family 4, subfamily Q, member 3 (OR4Q3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	c14_5008; OR4Q4; HSA6; OR14-3; C14orf13	c14_5008; OR4Q4; HSA6; OR14-3; C14orf13
Homo sapiens	RefSeq	NM_020993.3	ILMN_10019	BCL7A	NM_001024808.1	NM_001024808.1		605	67190735	NM_001024808.1	BCL7A	NP_001019979.1	ILMN_1706886	0000990041	A	3284	CAAGGGCTCCCAGGGCAAACCTAATTCCCCCCAAAACGTGAAGTCGGGGA	12	+	120983966-120984015	12q24.31c	Homo sapiens B-cell CLL/lymphoma 7A (BCL7A), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15897551] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BCL7	BCL7
Homo sapiens	RefSeq	NM_001024808.1	ILMN_10019	BCL7A	NM_001024808.1	NM_001024808.1		605	67190735	NM_001024808.1	BCL7A	NP_001019979.1	ILMN_2378081	0003460458	A	2971	TTCTCTGAAGTGCCTGAAGGTAGGAATGGGCCGGCGATTGGGACCAGCTG	12	+	120983653-120983702	12q24.31c	Homo sapiens B-cell CLL/lymphoma 7A (BCL7A), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15897551] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BCL7	BCL7
Homo sapiens	RefSeq	XM_933731.1	ILMN_45317	LOC23117	XM_933834.2	XM_933834.2		23117	113425921	XM_933834.2	LOC23117	XP_938927.2	ILMN_1656868	0002850400	I	4668	GAACCCAAGAGGCGGAGGGTCGGTGATGTGGAACCGTCACGCAAACCCAA	16	-	21321256-21321305	16p12.2a	PREDICTED: Homo sapiens KIAA0220-like protein, transcript variant 16 (LOC23117), mRNA.					
Homo sapiens	RefSeq	XM_933834.1	ILMN_45317	LOC23117	XM_933834.2	XM_933834.2		23117	113425921	XM_933834.2	LOC23117	XP_938927.2	ILMN_1659692	0001780086	I	1776	AAAGCAGTGGTTTTCAGCTGCCAGAGGCCTGAGAGAGTTTGGGCATACTC	16	-	21339324-21339373	16p12.2a	PREDICTED: Homo sapiens KIAA0220-like protein, transcript variant 16 (LOC23117), mRNA.					
Homo sapiens	RefSeq	XM_933909.1	ILMN_45317	LOC23117	XM_933834.2	XM_933834.2		23117	113425921	XM_933834.2	LOC23117	XP_938927.2	ILMN_1652982	0002340307	I	393	CTGGCCTTCCCTCATCAGCCGTAAATGATGATTTACTGCTGTTACCATCA	16	-	21340707-21340756	16p12.2a	PREDICTED: Homo sapiens KIAA0220-like protein, transcript variant 16 (LOC23117), mRNA.					
Homo sapiens	RefSeq	NM_014288.3	ILMN_6494	ITGB3BP	NM_014288.3	NM_014288.3		23421	27597074	NM_014288.3	ITGB3BP	NP_055103.3	ILMN_1692790	0005890253	S	498	CAGGACTTCCTCACAAAGCATCACGTCATCTTGACAGCTATGAATTCCTT	1	-	63912495-63912527:63919589-63919605	1p31.3c	Homo sapiens integrin beta 3 binding protein (beta3-endonexin) (ITGB3BP), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7593198] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10490654] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7593198] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7593198] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7593198] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10490654] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10490654] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10490654] [evidence TAS]	HSU37139; CENPR; NRIF3; TAP20; CENP-R	HSU37139; CENPR; NRIF3; TAP20; CENP-R
Homo sapiens	Unigene	Hs.438273	ILMN_92001	HS.438273	Hs.438273		Hs.438273		18970564	BM664445			ILMN_1905244	0002030066	S	430	GAGCAATCGGGATTGAGGCTGAAAGGATGGGAAGGAGGTATTTCTCCGAG	8	-	35342189-35342238		UI-E-CL1-afa-p-05-0-UI.s1 UI-E-CL1 Homo sapiens cDNA clone UI-E-CL1-afa-p-05-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_198682.1	ILMN_21361	GYPE	NM_198682.2	NM_198682.2		2996	149408154	NM_198682.2	GYPE	NP_941391.2	ILMN_1815908	0004050376	I	1128	GAGTGAGGTGGTAATCAGTGCCTCTTGGTTTCAGCCGTGGTCCTAGTGGC	4	-	145011980-145012029	4q31.22a	Homo sapiens glycophorin E (GYPE), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2295603] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7622054] [evidence TAS]			GPE; MNS; MiIX	GPE; MNS; MiIX
Homo sapiens	RefSeq	XM_944651.1	ILMN_30849	LOC648716	XM_944654.2	XM_944654.2		648716	113419242	XM_944654.2	LOC648716	XP_949747.1	ILMN_1653724	0002650386	A	1085	AGGATACCGAAGCTCAGAAAAATTAAATGATTTGCCCAGGATCACATAGC					PREDICTED: Homo sapiens hypothetical LOC648716, transcript variant 2 (LOC648716), mRNA.					
Homo sapiens	RefSeq	XM_944654.1	ILMN_30849	LOC648716	XM_944654.2	XM_944654.2		648716	113419242	XM_944654.2	LOC648716	XP_949747.1	ILMN_1653622	0002260544	I	544	CTTACTGATGAAACCCTGAGACTTGGGGCCAGTGACTGTTCAGAGGTCCA					PREDICTED: Homo sapiens hypothetical LOC648716, transcript variant 2 (LOC648716), mRNA.					
Homo sapiens	RefSeq	XM_942785.1	ILMN_41500	LOC642216	XM_942785.1	XM_942785.1		642216	88987399	XM_942785.1	LOC642216	XP_947878.1	ILMN_1724508	0003400022	S	431	CAGTAAGGCACTGAGCCAGGAGTCTATACAGCCATGCCAACAGGGAGCAC					PREDICTED: Homo sapiens hypothetical protein LOC642216 (LOC642216), mRNA.					
Homo sapiens	RefSeq	NM_005483.2	ILMN_24131	CHAF1A	NM_005483.2	NM_005483.2		10036	50513244	NM_005483.2	CHAF1A	NP_005474.2	ILMN_1669842	0002120097	S	3245	ACTTGTAAATGAATTGAAGCGTCAGGACCACCCGCCTGGCCACGTGCGCG	19	+	4394296-4394345	19p13.3d	Homo sapiens chromatin assembly factor 1, subunit A (p150) (CHAF1A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure [goid 5678] [pmid 7600578] [evidence TAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The formation of nucleosomes on newly replicated DNA, coupled to strand elongation [goid 6335] [pmid 7600578] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 7600578] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 7600578] [evidence TAS]; Interacting selectively with an unfolded protein [goid 51082] [pmid 7600578] [evidence TAS]	MGC71229; CAF1B; CAF1P150; CAF1; CAF-1; P150	MGC71229; CAF1B; CAF1P150; CAF1; CAF-1; P150
Homo sapiens	RefSeq	NM_024331.3	ILMN_21132	TTPAL	NM_024331.3	NM_024331.3		79183	85861249	NM_024331.3	TTPAL	NP_077307.2	ILMN_2364131	0001450452	A	5931	ATACTTGAAACCTCTCTGACCAAGAGCCTCTGATGGAGTGGGAGGTGAGC	20	+	42556374-42556423	20q13.12a	Homo sapiens tocopherol (alpha) transfer protein-like (TTPAL), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	DKFZp686E0870; MGC2470	DKFZp686E0870; MGC2470
Homo sapiens	RefSeq	XM_371118.2	ILMN_33612	SDCCAG3L	XM_371118.2	XM_371118.2		388478	89047219	XM_371118.2	SDCCAG3L	XP_371118.2	ILMN_1693727	0006840725	S	1170	AGAGAATGAAGCCTTGCGGTGCGACCAGGGGGCCAGCCTGACAGTGGTGA	18	-	55828364-55828413	18q21.32b	PREDICTED: Homo sapiens serologically defined colon cancer antigen 3-like (SDCCAG3L), mRNA.					
Homo sapiens	RefSeq	NM_016383.2	ILMN_17575	LUZP4	NM_016383.3	NM_016383.3		51213	93102365	NM_016383.3	LUZP4	NP_057467.1	ILMN_1783905	0004200630	S	1276	TGTCCCCCTTGGACGTTCCAACTTGACTTAGTGTCCAGTGCCCCTTGGAC	X	+	114447925-114447974	Xq23d	Homo sapiens leucine zipper protein 4 (LUZP4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			CT28; HOM-TES-85; CT-8	CT28; HOM-TES-85; CT-8
Homo sapiens	RefSeq	NM_001029999.1	ILMN_27823	MGC26718	NM_001029999.2	NM_001029999.2		440482	142373491	NM_001029999.2	MGC26718	NP_001025170.1	ILMN_1690304	0001770392	S	1772	AAGGGAACTAGCCATGCGGGTGAGAGATGAGACTGAAGTGATTGCTGCAC	18	+	14175083-14175132	18p11.21b	Homo sapiens similar to ankyrin repeat domain 20A (MGC26718), mRNA.					
Homo sapiens	RefSeq	NM_002977.1	ILMN_173139	SCN9A	NM_002977.1	NM_002977.1		6335	4506812	NM_002977.1	SCN9A	NP_002968.1	ILMN_2169692	0003800768	S	6100	GCAGTCACTAACTCTGATTTCCTAAGAAAGGTGGGCAGCATTAGCAGATG	2	-	166763260-166763309	2q24.3d	Homo sapiens sodium channel, voltage-gated, type IX, alpha subunit (SCN9A), mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 7720699] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 7720699] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NE-NA; NENA; ETHA; Nav1.7; PN1	NE-NA; NENA; ETHA; Nav1.7; PN1
Homo sapiens	RefSeq	NM_030637.1	ILMN_25173	DDHD1	NM_030637.1	NM_030637.1		80821	45120112	NM_030637.1	DDHD1	NP_085140.1	ILMN_1780306	0000430367	S	3042	GCAAGACCTGGATGTGAAGAAGGTTTGGGTAAACTGCATGTAAAGGCTAC	14	-	52582947-52582996	14q22.2a	Homo sapiens DDHD domain containing 1 (DDHD1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XR_040870.1	ILMN_337722	LOC729852	XR_040870.1	XR_040870.1		729852	169170926	XR_040870.1	LOC729852		ILMN_3222425	0006840564	A	398	GGCAGTACAGGGCACCATCACTGACCTTCCCGACCACTTACTCTCCTATG	7	+	7883574-7883623	7p21.3e	PREDICTED: Homo sapiens misc_RNA (LOC729852), miscRNA.					
Homo sapiens	RefSeq	XM_929036.1	ILMN_36308	LOC440005	XM_929036.1	XM_929036.1		440005	89031614	XM_929036.1	LOC440005	XP_934129.1	ILMN_1684298	0001740470	S	1205	CTCTGGCCTCTGCTGGGACCCTGGAGGTGTCTCCTTTCTCCTTCAAGTTT	10	-	120714934-120714983		PREDICTED: Homo sapiens similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC440005), mRNA.					
Homo sapiens	RefSeq	XM_940462.1	ILMN_41874	LOC651324	XM_940462.1	XM_940462.1		651324	89066600	XM_940462.1	LOC651324	XP_945555.1	ILMN_1718094	0007320564	S	926	GGTCCTTCAGCTAGTCCGGTGGCAGAGGCAGAAAGCCTGGATGGCTCATT					PREDICTED: Homo sapiens similar to RAB1, member RAS oncogene family (LOC651324), mRNA.					
Homo sapiens	RefSeq	NR_024473.1	ILMN_370827	LOC286135	NR_024473.1	NR_024473.1		286135	213418006	NR_024473.1	LOC286135		ILMN_3241104	0002320437	S	2722	GGCAGAGAAGCCCAGGGTGGGATGTTAGAGGGCATAGTAAGGGTCAGAGG	8	+	29811005-29811054		Homo sapiens hypothetical LOC286135 (LOC286135), non-coding RNA.					
Homo sapiens	Unigene	Hs.565209	ILMN_117725	HS.565209	Hs.565209		Hs.565209		21750750	AK092213			ILMN_1830842	0005390706	S	2951	TCGTGACTGAAGTCCAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTC	19	-	55034473-55034522		Homo sapiens cDNA FLJ34894 fis, clone NT2NE2017982					
Homo sapiens	Unigene	Hs.535044	ILMN_102747	HS.535044	Hs.535044		Hs.535044		51466784	XM_496943			ILMN_1904238	0004280600	S	5504	TTTTCAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGC					PREDICTED: Homo sapiens similar to FLJ00290 protein (LOC441310), mRNA					
Homo sapiens	RefSeq	NM_001018084.1	ILMN_20080	SLC26A10	NM_133489.2	NM_133489.2		65012	65506788	NM_133489.2	SLC26A10	NP_597996.2	ILMN_1755016	0005570189	A	1809	AGGATCCGCCTCCTCCTGGCTCAGTGTAATGCCTTGGTGCAGGGGACACT	12	+	56305484-56305514:56305632-56305650	12q13.3b-q14.1a	Homo sapiens solute carrier family 26, member 10 (SLC26A10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Homo sapiens	RefSeq	NM_133489.2	ILMN_20080	SLC26A10	NM_133489.2	NM_133489.2		65012	65506788	NM_133489.2	SLC26A10	NP_597996.2	ILMN_1770556	0005670520	I	2014	AGTGGCTGGAGACCCAGGGAGAGGGGTTTGGGAAAGGGTCTGAGGAAGAT	12	+	56305806-56305855	12q13.3b-q14.1a	Homo sapiens solute carrier family 26, member 10 (SLC26A10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Homo sapiens	RefSeq	NM_007353.2	ILMN_11787	GNA12	NM_007353.2	NM_007353.2		2768	42476110	NM_007353.2	GNA12	NP_031379.2	ILMN_1699358	0007150465	S	1156	TGGTCCAGTGCTTCGACAGGAAGAGACGGAACCGCAGCAAGCCACTCTTC	7	-	2801260-2801303:2834562-2834567	7p22.2c	Homo sapiens guanine nucleotide binding protein (G protein) alpha 12 (GNA12), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10477691] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11313914] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10648409] [evidence EXP]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8290554] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 8290554] [evidence TAS]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8290554] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8290554] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10026210] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	gep; RMP; NNX3; MGC99644; MGC104623	RMP; NNX3; gep; MGC99644; MGC104623
Homo sapiens	RefSeq	XM_926881.1	ILMN_11787	GNA12	NM_007353.2	NM_007353.2		2768	42476110	NM_007353.2	GNA12	NP_031379.2	ILMN_1692191	0004070259	S	1357	GTCGGTCAGACTCTTGGGTGTGTGTTGTCTGTGTGGTCCTTGAGTGGGTT	7	-	2773107-2773135:2801088-2801108	7p22.2c	Homo sapiens guanine nucleotide binding protein (G protein) alpha 12 (GNA12), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10477691] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11313914] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10648409] [evidence EXP]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8290554] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 8290554] [evidence TAS]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8290554] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8290554] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10026210] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	gep; RMP; NNX3; MGC99644; MGC104623	
Homo sapiens	RefSeq	XM_001127016.1	ILMN_181557	LOC728262	XM_001127016.1	XM_001127016.1		728262	113414850	XM_001127016.1	LOC728262	XP_001127016.1	ILMN_3275129	0002070133	M	437	CGGGCTTGGGGAGCGAGTTCTTTCGTCTCCTACATGACCTTCATCTGCTC	3	+	199366967-199367016	3q29i	PREDICTED: Homo sapiens hypothetical LOC728262 (LOC728262), mRNA.					
Homo sapiens	RefSeq	NM_177973.1	ILMN_16246	SULT2B1	NM_177973.1	NM_177973.1		6820	31563385	NM_177973.1	SULT2B1	NP_814444.1	ILMN_1763520	0001940452	I	99	GCCCCAGATCCCGGGCTTGTGGGACACCTATGAAGATGACATCTCGGAAA	19	+	49055527-49055576	19q13.32c	Homo sapiens sulfotransferase family, cytosolic, 2B, member 1 (SULT2B1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9799594] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11416019] [evidence EXP]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 12145317] [evidence IDA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 9799594] [evidence IDA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + an alcohol = adenosine 3',5'-bisphosphate + an alkyl sulfate [goid 4027] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenolic steroid = adenosine 3',5'-bisphosphate + steroid O-sulfate [goid 50294] [pmid 12145317] [evidence IDA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenolic steroid = adenosine 3',5'-bisphosphate + steroid O-sulfate [goid 50294] [pmid 9799594] [evidence IDA]	HSST2	HSST2
Homo sapiens	RefSeq	XM_001131272.1	ILMN_170960	LOC729663	XM_001131272.1	XM_001131272.1		729663	113421923	XM_001131272.1	LOC729663	XP_001131272.1	ILMN_3221751	0006370647	A	292	GAGATAATTAACGGGATTTACAGCACTCCTAGGCGGGGCTCCTGCCCTTC				10p11.23a	PREDICTED: Homo sapiens hypothetical LOC729663 (LOC729663), mRNA.					
Homo sapiens	RefSeq	NM_017746.1	ILMN_25785	TEX10	NM_017746.2	NM_017746.2		54881	142368662	NM_017746.2	TEX10	NP_060216.1	ILMN_1653529	0006770044	S	2685	TTGGGCCTGAGGAGCTGCCTGTTGTGGGCCAGCTGCTTCGACTGCTGCTT	9	-	102105806-102105855	9q31.1a	Homo sapiens testis expressed 10 (TEX10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RP11-208F1.2; FLJ20287; bA208F1.2	RP11-208F1.2; FLJ20287; bA208F1.2
Homo sapiens	Unigene	Hs.564428	ILMN_117092	HS.564428	Hs.564428		Hs.564428		6703165	AW296529			ILMN_1908807	0007650743	S	39	AGCACACAGAAGCCAAGATTTCAAGGCTGTCATTGTTTAAGGTCAGGATA	12	-	51537831-51537880		UI-H-BW0-aiv-b-03-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2730557 3, mRNA sequence					
Homo sapiens	Unigene	Hs.303217	ILMN_85484	HS.303217	Hs.303217		Hs.303217		15942987	BI831437			ILMN_1878763	0007380369	S	575	TTTGAATGAAACTCTGAGGAAGAAAGGGCTCTGGGGCAGGTCCAGGCTGC	7	+	80657530-80657579		603074540F1 NIH_MGC_119 Homo sapiens cDNA clone IMAGE:5166585 5, mRNA sequence					
Homo sapiens	RefSeq	XM_379075.3	ILMN_37486	FLJ22447	XM_943476.2	XM_943476.2		400221	113424898	XM_943476.2	FLJ22447	XP_948569.1	ILMN_1685465	0001240653	A	127	CACTTGCCTTTGGAAATGAAGGTGCAGAAACCATGGGAGGAACCTGATGA				14q23.1c	PREDICTED: Homo sapiens hypothetical gene supported by AK026100, transcript variant 2 (FLJ22447), mRNA.					
Homo sapiens	RefSeq	XM_943476.1	ILMN_37486	FLJ22447	XM_943476.2	XM_943476.2		400221	113424898	XM_943476.2	FLJ22447	XP_948569.1	ILMN_1728115	0000610209	I	1180	CAAAAAACAGAGATTTTTGTCATCTTAAACTGAATTTACTGGGAATAAAA				14q23.1c	PREDICTED: Homo sapiens hypothetical gene supported by AK026100, transcript variant 2 (FLJ22447), mRNA.					
Homo sapiens	RefSeq	NM_032637.2	ILMN_27439	SKP2	NM_005983.2	NM_005983.2		6502	16306594	NM_005983.2	SKP2	NP_005974.2	ILMN_1791002	0004730674	A	1010	GGCTGTTGCGCATGTGTCAGAGACCATCACCCAGCTGAATCTTAGCGGCT	5	+	36171768-36171817	5p13.2c	Homo sapiens S-phase kinase-associated protein 2 (p45) (SKP2), transcript variant 1, mRNA.		Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 7553852] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7553852] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11931757] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17157259] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12504026] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12813041] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286470] [evidence IPI]	MGC1366; FBXL1; FBL1; FLB1	MGC1366; FBXL1; FBL1; FLB1
Homo sapiens	RefSeq	NM_005983.2	ILMN_27439	SKP2	NM_005983.2	NM_005983.2		6502	16306594	NM_005983.2	SKP2	NP_005974.2	ILMN_1801391	0005420026	I	1396	AGAACCAGGAGATATGGGGCATCAAATGCCGACTGACACTGCAAAAGCCC	5	+	36182078-36182127	5p13.2c	Homo sapiens S-phase kinase-associated protein 2 (p45) (SKP2), transcript variant 1, mRNA.		Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 7553852] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7553852] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11931757] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17157259] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12504026] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12813041] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286470] [evidence IPI]	MGC1366; FBXL1; FBL1; FLB1	MGC1366; FBXL1; FBL1; FLB1
Homo sapiens	RefSeq	NM_000847.3	ILMN_22844	GSTA3	NM_000847.3	NM_000847.3		2940	24430143	NM_000847.3	GSTA3	NP_000838.3	ILMN_1769083	0004250674	S	54	CTCAAAGAAACCAAGAGACTGTTACCATGGCAGGGAAGCCCAAGCTTCAC	6	-	52878567-52878591:52878592-52878612:52882398-52882401	6p12.1d	Homo sapiens glutathione S-transferase A3 (GSTA3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 9480897] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GSTA3-3; GTA3; MGC22232	GSTA3-3; GTA3; MGC22232
Homo sapiens	RefSeq	NR_031640.1	ILMN_388567	MIR1305	NR_031640.1	NR_031640.1		100302270	269847233	NR_031640.1	MIR1305		ILMN_3310603	0000010154	S	36	TATTGTAAAGATACTTTTCAACTCTAATGGGAGAGACAGCAGGATTCTCC					Homo sapiens microRNA 1305 (MIR1305), microRNA.					
Homo sapiens	RefSeq	NM_145050.2	ILMN_8079	CCDC26	NM_145050.2	NM_145050.2		137196	47271469	NM_145050.2	CCDC26	NP_659487.1	ILMN_1733191	0004250114	S	1384	GACTGCACATCTTGCCTTGTTCCTGGTCCCACAGAGAGAATATCCAGTAC	8	-	130433406-130433455	8q24.21c	Homo sapiens coiled-coil domain containing 26 (CCDC26), mRNA.				MGC27434	MGC27434
Homo sapiens	RefSeq	XR_039411.1	ILMN_336092	LOC100129758	XR_039411.1	XR_039411.1		100129758	169170890	XR_039411.1	LOC100129758		ILMN_3254322	0000540598	M	1768	AGCCAAGATCGCACCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCT	7	+	39801493-39801542	7p14.1d	PREDICTED: Homo sapiens misc_RNA (LOC100129758), miscRNA.					
Homo sapiens	RefSeq	NM_020870.2	ILMN_43482	SH3RF1	NM_020870.3	NM_020870.3		57630	89142742	NM_020870.3	SH3RF1	NP_065921.2	ILMN_1656826	0001410358	S	4482	CGCAGTCATGGATCTGGGTAGTCCGGAAAACAAAAGGAGGGAAGACAGCC	4	-	170252715-170252764	4q32.3e-q33a	Homo sapiens SH3 domain containing ring finger 1 (SH3RF1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IEA]	Functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. MAPK scaffold proteins have binding sites for MAPK pathway kinases as well as for upstream signaling proteins [goid 5078] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17535800] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	POSH; SH3MD2; FLJ21602; KIAA1494; RNF142	POSH; SH3RF1; KIAA1494; RNF142
Homo sapiens	RefSeq	NM_000121.2	ILMN_19152	EPOR	NM_000121.2	NM_000121.2		2057	4557561	NM_000121.2	EPOR	NP_000112.1	ILMN_2168347	0003310242	S	1700	CTCAGAGAACCAGTGCAGACTCAAGACTTATGGAACAGGGATGGCGAGGC	19	-	11488573-11488622	19p13.2b	Homo sapiens erythropoietin receptor (EPOR), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1848667] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1668606] [evidence NAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]	Combining with erythropoietin to initiate a change in cell activity [goid 4900] [pmid 2163696] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11781573] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15644415] [evidence IPI]	MGC138358	MGC138358
Homo sapiens	RefSeq	XR_037812.1	ILMN_349074	LOC401676	XR_037812.1	XR_037812.1		401676	169202829	XR_037812.1	LOC401676		ILMN_3292008	0000610577	M	468	AGGCCCCCTTACCACTTCCAGGCCCCCAGCAGCATTTTCTGGCCGACCCT				11p15.2b	PREDICTED: Homo sapiens misc_RNA (LOC401676), miscRNA.					
Homo sapiens	RefSeq	NM_015926.3	ILMN_11226	TEX264	NM_015926.3	NM_015926.3		51368	34147580	NM_015926.3	TEX264	NP_057010.1	ILMN_1781623	0000430369	S	1385	CTCTTGCTAAGCCTTCTCCTCACTGCCCTTTAGGCTCCCAGGGCCAGAGG	3	+	51713207-51713256	3p21.2a-p21.1e	Homo sapiens testis expressed 264 (TEX264), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ13935; SIG11; ZSIG11; DKFZp451H0417	FLJ13935; SIG11; ZSIG11; DKFZp451H0417
Homo sapiens	RefSeq	NM_001475.1	ILMN_9557	GAGE5	NM_001475.1	NM_001475.1		2577	4503884	NM_001475.1	GAGE5	NP_001466.1	ILMN_2127767	0004290324	S	418	CACAGTGTTAAAAGAAGGCACGTTGAAATGATGCAGGCTGCTCCTATGTT	X	+	49110783-49110793:49110794-49110832		Homo sapiens G antigen 5 (GAGE5), mRNA.					
Homo sapiens	RefSeq	NM_001475.1	ILMN_9557	GAGE5	NM_001475.1	NM_001475.1		2577	4503884	NM_001475.1	GAGE5	NP_001466.1	ILMN_1782705	0006900328	S	1	AGCTGTGAGGCAGTGCTGTGTGGTTCCTGCCGTCCGGACTCTTTTTCCTC	X	+	49103601-49103650		Homo sapiens G antigen 5 (GAGE5), mRNA.					
Homo sapiens	RefSeq	NM_012196.1	ILMN_9557	GAGE5	NM_001475.1	NM_001475.1		2577	4503884	NM_001475.1	GAGE5	NP_001466.1	ILMN_1738450	0001050373	S	3	CTGTGAGGCAGTGCTGTGTGGTTCCTGCCGTCCGGACTCTTTTTCCTCTA	X	+	49103603-49103652		Homo sapiens G antigen 5 (GAGE5), mRNA.					
Homo sapiens	RefSeq	NM_018105.2	ILMN_15754	THAP1	NM_018105.2	NM_018105.2		55145	40068498	NM_018105.2	THAP1	NP_060575.1	ILMN_1788988	0003870523	I	313	CCTCTTACTCGACCCAGTCTTTGTAAAGAATGGGAGGCAGCTGTCAGAAG	8	-	42813627-42813676	8p11.21a	Homo sapiens THAP domain containing, apoptosis associated protein 1 (THAP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ10477; MGC33014	FLJ10477; MGC33014
Homo sapiens	RefSeq	NM_199003.1	ILMN_15754	THAP1	NM_018105.2	NM_018105.2		55145	40068498	NM_018105.2	THAP1	NP_060575.1	ILMN_1757272	0001010138	A	1675	CACCCTAGCTGAAGGACATCCAGTTCCCCAGCTGTAGTTATGTATCTGCC	8	-	42811416-42811465	8p11.21a	Homo sapiens THAP domain containing, apoptosis associated protein 1 (THAP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ10477; MGC33014	FLJ10477; MGC33014
Homo sapiens	RefSeq	NM_015459.3	ILMN_20827	ATL3	NM_015459.3	NM_015459.3		25923	45827805	NM_015459.3	ATL3	NP_056274.3	ILMN_1751086	0001240243	S	1926	AGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACGGCCACAGG	11	-	63396717-63396766	11q13.1a	Homo sapiens atlastin GTPase 3 (ATL3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	ATL3; DKFZp564J0863	DKFZp564J0863; ATL3
Homo sapiens	RefSeq	NM_153607.1	ILMN_8744	C5ORF41	NM_153607.1	NM_153607.1		153222	23957697	NM_153607.1	C5orf41	NP_705835.1	ILMN_2195821	0006860228	S	5038	GACATAGGCAAGCTGTGCAGCTTTACATTTTAACCAGGGGACTCTGTGGC	5	+	172496055-172496104	5q35.2a	Homo sapiens chromosome 5 open reading frame 41 (C5orf41), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	DKFZp686G2059; DKFZp313F2319	DKFZp686G2059; DKFZp313F2319
Homo sapiens	RefSeq	NM_153607.1	ILMN_8744	C5ORF41	NM_153607.1	NM_153607.1		153222	23957697	NM_153607.1	C5orf41	NP_705835.1	ILMN_1776788	0006840491	S	4909	TCCTGCCATTTGCTGCTAAATCTGGGCTGGTCAGAATGCTGCAGCGATAC	5	+	172495926-172495975	5q35.2a	Homo sapiens chromosome 5 open reading frame 41 (C5orf41), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	DKFZp686G2059; DKFZp313F2319	DKFZp686G2059; DKFZp313F2319
Homo sapiens	RefSeq	NM_033114.3	ILMN_180932	ZCRB1	NM_033114.3	NM_033114.3		85437	51243064	NM_033114.3	ZCRB1	NP_149105.3	ILMN_1659082	0001990639	S	1634	TCTTCCCATTCTGTCTGCAGGTGGGTATATGGTAATGGGATTAGAGAGCC	12	-	42706048-42706097	12q12e	Homo sapiens zinc finger CCHC-type and RNA binding motif 1 (ZCRB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The minor (U12-dependent) spliceosome is composed of the snRNPs, U11, U12, U4atac, U6atac, and U5 (which is also a component of the major spliceosome). This minor form of the spliceosome is responsible for the splicing of the majority of introns with atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site [goid 5689] [pmid 15146077] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 15146077] [evidence IC ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RBM36; ZCCHC19; MGC26805; MADP-1; MADP1	RBM36; ZCCHC19; MADP-1; MGC26805; MADP1
Homo sapiens	RefSeq	NM_005951.1	ILMN_23074	MT1H	NM_005951.1	NM_005951.1		4496	10835084	NM_005951.1	MT1H	NP_005942.1	ILMN_1683923	0001580561	S	214	GGGACAGCCCTGCTGTCAGATGAAAACAGAATGACACGTAAAATCCGAGG	16	+	55262407-55262456	16q13b	Homo sapiens metallothionein 1H (MT1H), mRNA.			Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14668352] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with cadmium (Cd) ions [goid 46870] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC70702; MT1	MGC70702; MT1
Homo sapiens	RefSeq	NM_001666.2	ILMN_2811	ARHGAP4	NM_001666.2	NM_001666.2		393	41327157	NM_001666.2	ARHGAP4	NP_001657.2	ILMN_1770824	0007200240	S	3083	CCCTTGTGGAGGCAGCTGAGGAAGGATGCTGGGGAAAGCCCTCTTCTGCA	X	-	152826127-152826176	Xq28f	Homo sapiens Rho GTPase activating protein 4 (ARHGAP4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8570618] [evidence TAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 8570618] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 8570618] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8570618] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [pmid 8570618] [evidence TAS]	p115; C1; RGC1; KIAA0131; RhoGAP4	C1; p115; RGC1; KIAA0131; RhoGAP4
Homo sapiens	Unigene	Hs.512090	ILMN_98143	HS.512090	Hs.512090		Hs.512090		19343616	BC025727			ILMN_1890134	0004850132	S	197	CGGTTTAAGAGGGCTGTTCTGGTATAGGCAAGATCCTGGGAAAGGCCCTG	14	+	21579050-21579099		Homo sapiens T cell receptor alpha variable 20, mRNA (cDNA clone MGC:34712 IMAGE:5201547), complete cds					
Homo sapiens	RefSeq	NM_144649.1	ILMN_4901	TMEM71	NM_144649.1	NM_144649.1		137835	21389524	NM_144649.1	TMEM71	NP_653250.1	ILMN_1674402	0001710541	S	1758	TGACTCAAGGGCTGTAGATGTTCCCTTTCCACCCCCCACACTTGGTGCGT	8	-	133791561-133791610	8q24.22b	Homo sapiens transmembrane protein 71 (TMEM71), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ33069; MGC111188	MGC111188; FLJ33069
Homo sapiens	Unigene	Hs.563292	ILMN_116189	HS.563292	Hs.563292		Hs.563292		66785335	BP419082			ILMN_1865043	0001190736	S	242	GATGAAGCCACTGTCGAATAAAGCAAAACACAATTTGCTGCCCCACCTCC	5	+	116054369-116054418		BP419082 Homo sapiens small intestine Homo sapiens cDNA clone HIE02285r 3, mRNA sequence					
Homo sapiens	RefSeq	NM_030824.1	ILMN_17395	ZNF442	NM_030824.2	NM_030824.2		79973	112807213	NM_030824.2	ZNF442	NP_110451.1	ILMN_1663754	0007570161	S	2636	GGGGATTGGTTCCAGACCCCCTAAGCATACCTAAATCCACAGATGCTGTG	19	-	12460324-12460373	19p13.2a	Homo sapiens zinc finger protein 442 (ZNF442), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14356	FLJ14356
Homo sapiens	RefSeq	NM_033357.2	ILMN_1386	CASP8	NM_033357.2	NM_033357.2		841	73623021	NM_033357.2	CASP8	NP_203521.1	ILMN_1669565	0000020369	I	1219	AGGGAGAGAACAAAAGCTATACCAAAAGGGCCATGTTTCAAGAAAATGGA	2	+	201850000-201850049	2q33.1f	Homo sapiens caspase 8, apoptosis-related cysteine peptidase (CASP8), transcript variant D, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10891503] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8681376] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12804595] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10894160] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12887920] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9721089] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10891503] [evidence TAS]; A heterodimer associated with 90S and 66S preribosomes in the nucleolus; involved in ribosomal large subunit biogenesis [goid 30690] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12888622] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 11048727] [evidence EXP]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 8681376] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11717445] [evidence IPI]	MCH5; MGC78473; MACH; FLICE; CAP4	MGC78473; MACH; MCH5; FLICE; CAP4
Homo sapiens	RefSeq	XM_001718523.1	ILMN_349163	LOC100129119	XM_001718523.1	XM_001718523.1		100129119	169208949	XM_001718523.1	LOC100129119	XP_001718575.1	ILMN_3269377	0004070039	M	287	GATAACCTGGGAGGATGGGGTGGAATCTGAGGGGTGAGCCTTCTTCCCCA				15q24.1a	PREDICTED: Homo sapiens hypothetical LOC100129119 (LOC100129119), mRNA.					
Homo sapiens	RefSeq	NM_018341.1	ILMN_23256	C6ORF70	NM_018341.1	NM_018341.1		55780	62988330	NM_018341.1	C6orf70	NP_060811.1	ILMN_1657064	0005050021	S	1731	GCGGTCTCGCCAGCGGCAGAACTACCTGCGTATGTGGAGTAGTATCAGAC	6	+	169918653-169918694:169921203-169921210	6q27f	Homo sapiens chromosome 6 open reading frame 70 (C6orf70), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			dJ266L20.3; FLJ11152	dJ266L20.3; FLJ11152
Homo sapiens	RefSeq	NM_003536.2	ILMN_452	HIST1H3H	NM_003536.2	NM_003536.2		8357	15718725	NM_003536.2	HIST1H3H	NP_003527.1	ILMN_1749368	0001690706	S	117	TCAAGAAGCCCCATCGCTATCGGCCTGGTACAGTGGCTCTCCGCGAGATT	6	+	27777958-27778007	6p22.1c	Homo sapiens histone cluster 1, H3h (HIST1H3H), mRNA.				H3/k; H3F1K; H3FK	H3/k; H3F1K; H3FK
Homo sapiens	RefSeq	XM_939879.1	ILMN_43491	LOC650794	XM_939879.1	XM_939879.1		650794	89036957	XM_939879.1	LOC650794	XP_944972.1	ILMN_1789682	0006180707	S	339	GAACATTCCAGAGCCAGTTGGTTTCATCCAGGCTCTCACAACCGCAGCCA				13q12.11b	PREDICTED: Homo sapiens similar to 28S ribosomal protein S31, mitochondrial precursor (S31mt) (MRP-S31) (Imogen 38) (LOC650794), mRNA.					
Homo sapiens	RefSeq	NM_005068.2	ILMN_27414	SIM1	NM_005068.2	NM_005068.2		6492	21614541	NM_005068.2	SIM1	NP_005059.2	ILMN_1696279	0001570544	S	3169	GCTTTTCAGTTAGACAAGGACCAGGATTGCACTGACATGGCGCTGAGGGT	6	-	100944247-100944296	6q16.3b	Homo sapiens single-minded homolog 1 (Drosophila) (SIM1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9199934] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9199934] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8812055] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]		
Homo sapiens	RefSeq	NM_005068.2	ILMN_27414	SIM1	NM_005068.2	NM_005068.2		6492	21614541	NM_005068.2	SIM1	NP_005059.2	ILMN_2073279	0005050400	S	3779	CATTCACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGC	6	-	100943637-100943686	6q16.3b	Homo sapiens single-minded homolog 1 (Drosophila) (SIM1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9199934] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9199934] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8812055] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]		
Homo sapiens	RefSeq	NM_017807.2	ILMN_21245	OSGEP	NM_017807.2	NM_017807.2		55644	50726965	NM_017807.2	OSGEP	NP_060277.1	ILMN_1753393	0000150176	S	1401	CGGAACCCAAAGGACCCCGTGCCTCAATCTCTATCCTGATGTCATGGGAG	14	-	20915312-20915361	14q11.2b	Homo sapiens O-sialoglycoprotein endopeptidase (OSGEP), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	OSGEP1; FLJ20411; PRSMG1; GCPL1; KAE1	OSGEP1; FLJ20411; PRSMG1; GCPL1; KAE1
Homo sapiens	RefSeq	NR_003033.1	ILMN_165157	SNORD5	NR_003033.1	NR_003033.1		692072	94536727	NR_003033.1	SNORD5		ILMN_3237236	0005690470	S	20	CTGTTCAACTGCTGAATGATAACGGGCATGAACTAAAACTTAATTCTGAC	11	-	93466397-93466446	11q21a	Homo sapiens small nucleolar RNA, C/D box 5 (SNORD5), small nucleolar RNA.				mgh28S-2410	mgh28S-2410
Homo sapiens	RefSeq	NM_004731.3	ILMN_21160	SLC16A7	NM_004731.3	NM_004731.3		9194	34222196	NM_004731.3	SLC16A7	NP_004722.2	ILMN_1810053	0003520255	S	2789	GGCCTTGTGCTCAACCACTGGAAATGCCTCCTGGGATAAGAATGGCAGCA	12	+	58460923-58460972	12q14.1b	Homo sapiens solute carrier family 16, member 7 (monocarboxylic acid transporter 2) (SLC16A7), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9786900] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9786900] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of pyruvate into, out of, within or between cells [goid 6848] [pmid 9786900] [evidence TAS]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of pyruvate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 5477] [pmid 9786900] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism [goid 15355] [evidence IEA]	MCT2	MCT2
Homo sapiens	RefSeq	NM_024940.4	ILMN_181144	DOCK5	NM_024940.6	NM_024940.6		80005	117553585	NM_024940.6	DOCK5	NP_079216.4	ILMN_1752455	0003310682	S	7250	CTCTGTGTTTCCTGTTTCACCGCCACCCTTTCAGGAGAGAACTACACCAG	8	+	25253180-25253229	8p21.2c	Homo sapiens dedicator of cytokinesis 5 (DOCK5), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	DKFZp451J181; DKFZp781J211; DKFZp779M164	DKFZp451J181; DKFZp781J211; DKFZp779M164
Homo sapiens	RefSeq	XM_930690.1	ILMN_40926	LOC653059	XM_930690.1	XM_930690.1		653059	88943961	XM_930690.1	LOC653059	XP_935783.1	ILMN_1737078	0000840470	I	1210	GTTGAGGGAAGAGGTAAAAGTTAAAATTTGCTGGGTGTGATGGCTCATGC	1	+	129133-129182		PREDICTED: Homo sapiens similar to K07F5.15, transcript variant 2 (LOC653059), mRNA.					
Homo sapiens	RefSeq	NM_015917.1	ILMN_18745	GSTK1	NM_015917.1	NM_015917.1		373156	7705703	NM_015917.1	GSTK1	NP_057001.1	ILMN_1725241	0005900692	S	767	CCATCTGCTTAACCCTTGGCTCCACCATAAGGCACTGGGACTCGGATTTC	7	+	142676095-142676144	7q34f	Homo sapiens glutathione S-transferase kappa 1 (GSTK1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin cell wall [goid 30288] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin cell wall [goid 30288] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GST13	GST13
Homo sapiens	RefSeq	XM_926888.1	ILMN_45036	LOC643583	XM_926888.1	XM_926888.1		643583	89057882	XM_926888.1	LOC643583	XP_931981.1	ILMN_1791819	0002650224	S	239	GCCCTCCATGGATTCGGGATTGCTCTGAGGGCCATAGAAGGCATTTGCGT	20	-	43574636-43574685		PREDICTED: Homo sapiens similar to Kunitz-type protease inhibitor 3 precursor (HKIB9) (LOC643583), mRNA.					
Homo sapiens	RefSeq	NM_015554.1	ILMN_19408	GLCE	NM_015554.1	NM_015554.1		26035	51317379	NM_015554.1	GLCE	NP_056369.1	ILMN_1714349	0002350524	S	4716	CAGTGCAGACTCTCACTGAAAGCTGCTATTTTCATCCTCCTTGTGGTTGC	15	+	67351271-67351320	15q23a	Homo sapiens glucuronic acid epimerase (GLCE), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence ISS]; The chemical reactions and pathways resulting in the formation of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha1->4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 30210] [evidence ISS]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: UDP-glucuronate = UDP-L-iduronate [goid 50379] [pmid 15853773] [evidence IDA]	KIAA0836; HSEPI	KIAA0836; HSEPI
Homo sapiens	RefSeq	XM_944927.1	ILMN_177206	LOC730546	XM_001126287.1	XM_001126287.1		730546	113417347	XM_001126287.1	LOC730546	XP_001126287.1	ILMN_1750601	0006980025	I	564	CCCCAACTGCCACTGTGTTTCAACTGTCGCTGGCTGTGTTTCAACTGCTG					PREDICTED: Homo sapiens hypothetical protein LOC730546 (LOC730546), mRNA.					
Homo sapiens	RefSeq	NR_031647.1	ILMN_388570	MIR1245	NR_031647.1	NR_031647.1		100302219	269847256	NR_031647.1	MIR1245		ILMN_3308708	0001090382	S	10	AGGCCTTTAGATCATCTGATGTTGAATACTCTTTAAGTGATCTAAAGGCC					Homo sapiens microRNA 1245 (MIR1245), microRNA.					
Homo sapiens	RefSeq	NM_001627.2	ILMN_164638	ALCAM	NM_001627.2	NM_001627.2		214	68163410	NM_001627.2	ALCAM	NP_001618.2	ILMN_1670870	0002070575	S	4391	GCTGTCAGAACCTCGAGAGCAGAACATGAGAAACTCAGAGCTCTGGACCG	3	+	105295394-105295443	3q13.11c	Homo sapiens activated leukocyte cell adhesion molecule (ALCAM), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7760007] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7760007] [evidence TAS]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 7760007] [evidence TAS]	CD166; FLJ38514; MEMD; MGC71733	CD166; FLJ38514; MEMD; MGC71733
Homo sapiens	RefSeq	NM_006700.1	ILMN_21539	TRAFD1	NM_006700.1	NM_006700.1		10906	5729827	NM_006700.1	TRAFD1	NP_006691.1	ILMN_1758250	0001570129	S	2309	CAGTAACGAGGCTTTTGATGTGTTGAGCTGGAGGTGAGTGGACCGGGGGC	12	+	111075484-111075533	12q24.13a	Homo sapiens TRAF-type zinc finger domain containing 1 (TRAFD1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16221674] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLN29	FLN29
Homo sapiens	RefSeq	NM_004052.2	ILMN_3871	BNIP3	NM_004052.2	NM_004052.2		664	7669480	NM_004052.2	BNIP3	NP_004043.2	ILMN_1724658	0006770608	S	1351	CACCCTGGATGATCAGTTTTCTGCTGAAGGCACCTACTCAGTATCTTTTC	10	-	133781337-133781386	10q26.3d	Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3 (BNIP3), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 7954800] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7954800] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9396766] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9973195] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence ISS]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the mitochondrial outer membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 31307] [pmid 10891486] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [pmid 10891486] [evidence IDA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [pmid 9396766] [evidence IMP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence ISS]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 10891486] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 10891486] [evidence IDA]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [pmid 10891486] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 7954800] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9396766] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10381623] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9973195] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 10891486] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [pmid 9973195] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 45837] [pmid 10891486] [evidence IDA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [pmid 10891486] [evidence IDA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [evidence ISS]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 9973195] [evidence IDA]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9396766] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10381623] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10381623] [evidence IDA]	NIP3	NIP3
Homo sapiens	RefSeq	XM_930991.1	ILMN_44127	LOC642662	XM_930991.1	XM_930991.1		642662	88974850	XM_930991.1	LOC642662	XP_936084.1	ILMN_1658983	0000830148	S	1346	CCTCCAAACCAGCAAATGACACAATCACCGAAGCTGTCACCACTCAGGCC	4	+	71200438-71200487	4q13.3a	PREDICTED: Homo sapiens hypothetical LOC642662 (LOC642662), mRNA.					
Homo sapiens	RefSeq	NM_002617.3	ILMN_2584	PEX10	NM_002617.3	NM_002617.3		5192	24797087	NM_002617.3	PEX10	NP_002608.1	ILMN_2315289	0000240373	A	1235	CTGGGAGGGGCGCCTGAACCCAGAACATTTCCCTAACCCCAACCTGGTAG	1	-	2336970-2337019	1p36.32c	Homo sapiens peroxisomal biogenesis factor 10 (PEX10), transcript variant 2, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 9922452] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 9700193] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [pmid 9700193] [evidence IDA]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 10862081] [evidence IMP]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 9683594] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10837480] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10562279] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10862081] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC1998; RNF69; NALD	RNF69; MGC1998; NALD
Homo sapiens	RefSeq	NR_029905.1	ILMN_387790	MIR325	NR_029905.1	NR_029905.1		442899	262205145	NR_029905.1	MIR325		ILMN_3309985	0000290148	S	48	ATTTGTTTATTGAGGACCTCCTATCAATCAAGCACTGTGCTAGGCTCTGG				Xq21.1a	Homo sapiens microRNA 325 (MIR325), microRNA.					
Homo sapiens	RefSeq	XM_945923.1	ILMN_308651	XRRA1	NM_182969.1	NM_182969.1		143570	150378448	NM_182969.1	XRRA1	NP_892014.1	ILMN_1789134	0004280296	A	2285	CCTGTGCCACTCCTCCAAGCCCAAGCTGGACACTCTTCAGAAACCCTATG	11	-	74555229-74555278	11q13.4c	Homo sapiens X-ray radiation resistance associated 1 (XRRA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12908878] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12908878] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [pmid 12908878] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_004181.3	ILMN_9422	UCHL1	NM_004181.3	NM_004181.3		7345	34147658	NM_004181.3	UCHL1	NP_004172.2	ILMN_1757387	0004640500	S	728	GGCAGCCTAATGCTCTGTGGGAGGGACTTTGCTGATTTCCCCTCTTCCCT	4	+	40964838-40964847:40964848-40964887	4p13d	Homo sapiens ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) (UCHL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The directed movement of mitochondria along microtubules in nerve cell axons [goid 19896] [evidence IEA]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IEA]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [pmid 9521656] [evidence IDA]; The directed movement of mitochondria along microtubules in nerve cell axons [goid 19896] [evidence IEA]; The specific actions or reactions of an organism relating to the intake of food, any substance (usually solid) that can be metabolized by an organism to give energy and build tissue [goid 42755] [evidence IEA]; Any process pertaining to the functions of the nervous and muscular systems of an organism [goid 50905] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 8639624] [evidence IDA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [pmid 9521656] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12082530] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the removal of terminal peptide residues that are substituted, cyclized or linked by isopeptide bonds (peptide linkages other than those of alpha-carboxyl to alpha-amino groups) [goid 8242] [pmid 9521656] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [pmid 9521656] [evidence IDA]	PARK5; Uch-L1; PGP9.5	PARK5; Uch-L1; PGP9.5
Homo sapiens	RefSeq	NM_001007255.1	ILMN_13602	KLHDC9	NM_001007255.1	NM_001007255.1		126823	55956889	NM_001007255.1	KLHDC9	NP_001007256.1	ILMN_2405470	0007160402	A	885	CCACCTGTTGCTCCTCATTTGATGGAACAGCTTGCAAGGCTTGTGAGCAG	1	+	159336018-159336067	1q23.3a	Homo sapiens kelch domain containing 9 (KLHDC9), transcript variant 2, mRNA.				MGC33338; RP11-544M22.9; KARCA1	MGC33338; RP11-544M22.9; KARCA1
Homo sapiens	RefSeq	XM_063481.5	ILMN_167181	LOC728219	XM_001126895.1	XM_001126895.1		728219	113424526	XM_001126895.1	LOC728219	XP_001126895.1	ILMN_1660700	0005420608	S	254	CAGAGCCCGAGTGGCTGCGCAGCGAGGAGCATCCGAGCCAGTTTTTCGCC	14	-	19973507-19973556	14q11.2b	PREDICTED: Homo sapiens hypothetical protein LOC728219 (LOC728219), mRNA.					
Homo sapiens	RefSeq	NM_017435.2	ILMN_22034	SLCO1C1	NM_017435.3	NM_017435.3		53919	142369660	NM_017435.3	SLCO1C1	NP_059131.1	ILMN_1792317	0002510554	S	2455	GTGATCATCTGCTACAACCCAACTACTGGCCAGGCAAGGAAACTCAACTT	12	+	20796677-20796726	12p12.2a	Homo sapiens solute carrier organic anion transporter family, member 1C1 (SLCO1C1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SLC21A14; OATP1; OATP1C1; OATP-F	SLC21A14; OATP1; OATP1C1; OATP-F
Homo sapiens	RefSeq	NM_005975.2	ILMN_183737	PTK6	NM_005975.2	NM_005975.2		5753	27886594	NM_005975.2	PTK6	NP_005966.1	ILMN_2075800	0006330608	S	2098	GGGGGCTGCCTCCTTTGCACCTGATTTTGAAGGTGTCTCTTTCATCCATG	20	-	62160137-62160186	20q13.33e	Homo sapiens PTK6 protein tyrosine kinase 6 (PTK6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8036022] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 8036022] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ42088; BRK	FLJ42088; BRK
Homo sapiens	Unigene	Hs.567477	ILMN_119658	HS.567477	Hs.567477		Hs.567477		82698037	DQ286431			ILMN_1902146	0005670220	S	338	ACGATGCCAGACTCATGTTTGGAGATGGAACTCAGCTGGTGGTGAAGCCC	14	+	22049799-22049846:22086287-22086288		Homo sapiens T-cell receptor alpha precursor (TCRA) mRNA, complete cds					
Homo sapiens	RefSeq	NM_021956.2	ILMN_17919	GRIK2	NM_021956.2	NM_021956.2		2898	28558991	NM_021956.2	GRIK2	NP_068775.1	ILMN_2396697	0001030240	A	2917	CCATGGCATAAAGCTGGGAGGCCAAACACCCAAGCACAAACTGTCGTCTT	6	+	102623069-102623079:102623080-102623118	6q16.3c	Homo sapiens glutamate receptor, ionotropic, kainate 2 (GRIK2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7536611] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 7536611] [evidence TAS]; A process which directly activates any of the steps required for programmed cell death as a result of a chemical stimulus [goid 31557] [pmid 15537878] [evidence NAS]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [pmid 15537878] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [pmid 15537878] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [pmid 15537878] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA];  [goid 15277] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA];  [goid 15277] [pmid 15537878] [evidence IDA]	GLUR6; GLR6; EAA4; MGC74427	GLUR6; GLR6; EAA4; MGC74427
Homo sapiens	RefSeq	NM_021956.2	ILMN_17919	GRIK2	NM_021956.2	NM_021956.2		2898	28558991	NM_021956.2	GRIK2	NP_068775.1	ILMN_2396702	0003840246	A	2672	CATTGTTCTGGCAGCCGGCTTGGTGCTTTCAGTTTTTGTGGCAGTGGGAG	6	+	102610058-102610107	6q16.3c	Homo sapiens glutamate receptor, ionotropic, kainate 2 (GRIK2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7536611] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 7536611] [evidence TAS]; A process which directly activates any of the steps required for programmed cell death as a result of a chemical stimulus [goid 31557] [pmid 15537878] [evidence NAS]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [pmid 15537878] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [pmid 15537878] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [pmid 15537878] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA];  [goid 15277] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA];  [goid 15277] [pmid 15537878] [evidence IDA]	GLUR6; GLR6; EAA4; MGC74427	GLUR6; GLR6; EAA4; MGC74427
Homo sapiens	RefSeq	NM_021956.2	ILMN_17919	GRIK2	NM_021956.2	NM_021956.2		2898	28558991	NM_021956.2	GRIK2	NP_068775.1	ILMN_1661376	0003390148	A	2804	CCTGAAGTGCCAGCGTCGGTTAAAACATAAGCCACAGGCCCCAGTTATTG	6	+	102622956-102623005	6q16.3c	Homo sapiens glutamate receptor, ionotropic, kainate 2 (GRIK2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7536611] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 7536611] [evidence TAS]; A process which directly activates any of the steps required for programmed cell death as a result of a chemical stimulus [goid 31557] [pmid 15537878] [evidence NAS]; A process that modulates short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity [goid 48172] [pmid 15537878] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50806] [pmid 15537878] [evidence IMP]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [pmid 15537878] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA];  [goid 15277] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA];  [goid 15277] [pmid 15537878] [evidence IDA]	GLUR6; GLR6; EAA4; MGC74427	GLUR6; GLR6; EAA4; MGC74427
Homo sapiens	RefSeq	NR_029607.1	ILMN_388177	MIR7-3	NR_029607.1	NR_029607.1		407045	262206206	NR_029607.1	MIR7-3		ILMN_3310040	0004480059	S	49	TTGTTCTGATGTACTACGACAACAAGTCACAGCCGGCCTCATAGCGCAGA				19p13.3d	Homo sapiens microRNA 7-3 (MIR7-3), microRNA.					
Homo sapiens	RefSeq	NM_182945.1	ILMN_28042	NIN	NM_182945.1	NM_182945.1		51199	33946318	NM_182945.1	NIN	NP_891990.1	ILMN_2347541	0001430376	A	5711	GAGGCTCCAGACCATGGTACAGAACACCAAAGCCGAACTCACGCACTCCC	14	-	50275783-50275832	14q22.1b-q22.1c	Homo sapiens ninein (GSK3B interacting protein) (NIN), transcript variant 3, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 12927815] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process by which a centrosome is transported to, and/or maintained in, a specific location within the cell [goid 51642] [pmid 16154161] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15147888] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA1565	KIAA1565
Homo sapiens	RefSeq	NR_001538.1	ILMN_8245	TTTY1	NR_001538.1	NR_001538.1		50858	32563540	NR_001538.1	TTTY1		ILMN_2204360	0002710201	S	641	CAGAGAAGATAGGTGAAGGTACAGCATGGCATCCACCCCTCACCAGAGGG	Y	-	10200984-10201022:10208604-10208614	Yp11.2b	Homo sapiens testis-specific transcript, Y-linked 1 (non-protein coding) (TTTY1), non-coding RNA.				TTY1	TTY1
Homo sapiens	RefSeq	XR_037432.1	ILMN_339025	LOC100133740	XR_037432.1	XR_037432.1		100133740	169172371	XR_037432.1	LOC100133740		ILMN_3280579	0000780553	M	208	GTCTATGAGAACTACGACAAGGAGACTATCGGGGTGCAACCTGGCTGGGG					PREDICTED: Homo sapiens misc_RNA (LOC100133740), miscRNA.					
Homo sapiens	RefSeq	XM_932514.1	ILMN_40144	LOC644916	XM_932514.1	XM_932514.1		644916	89038699	XM_932514.1	LOC644916	XP_937607.1	ILMN_1723213	0006960112	S	405	GGAGCTCAGCAACGACACATTTCTGTATCGCCCCGTGAAGAGCTCTACGC	15	+	99276357-99276366:99276623-99276662		PREDICTED: Homo sapiens hypothetical protein LOC644916 (LOC644916), mRNA.					
Homo sapiens	RefSeq	NM_080686.1	ILMN_6888	BAT2	NM_080686.2	NM_080686.2		7916	149158689	NM_080686.2	BAT2	NP_542417.2	ILMN_1760563	0001430059	A	6568	GACCTTTACCAGCAGGCCTCCCCACCAGATGCCCTGCGCTGGATACCTAA	6	+	31605087-31605101:31605223-31605257	6p21.33a	Homo sapiens HLA-B associated transcript 2 (BAT2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	G2; D6S51E; DKFZp686D09175; D6S51	G2; D6S51E; DKFZp686D09175; D6S51
Homo sapiens	RefSeq	NM_152682.1	ILMN_6725	RWDD4A	NM_152682.2	NM_152682.2		201965	116256478	NM_152682.2	RWDD4A	NP_689895.2	ILMN_1708660	0005670164	S	2416	TGTAGGGGTTCTGGTGATGGTGGTACCTCTTATTACCTTATGTAAAACAC	4	-	184797910-184797959	4q35.1c	Homo sapiens RWD domain containing 4A (RWDD4A), mRNA.				FAM28A; MGC10198	FAM28A; MGC10198
Homo sapiens	RefSeq	NM_002211.2	ILMN_178157	ITGB1	NM_002211.2	NM_002211.2		3688	19743812	NM_002211.2	ITGB1	NP_002202.2	ILMN_1723467	0000610452	I	3488	GTGGCTATGCAACAGCTCTCACCTACGCGAGTCTTACTTTGAGTTAGTGC	10	-	33229489-33229538	10p11.22b	Homo sapiens integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (ITGB1), transcript variant 1A, mRNA.	Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 11919189] [evidence TAS]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 9552005] [evidence NAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 1715889] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [pmid 9415431] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [pmid 9415431] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 10201960] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 10201960] [evidence TAS]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 1715889] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 11919189] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 1715889] [evidence IC ]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14681217] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9552005] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GPIIA; VLAB; MDF2; FNRB; CD29; MSK12	GPIIA; VLAB; MDF2; FNRB; CD29; MSK12
Homo sapiens	RefSeq	XM_929046.1	ILMN_39320	LOC646084	XM_929046.1	XM_929046.1		646084	89041352	XM_929046.1	LOC646084	XP_934139.1	ILMN_1776887	0001430192	S	542	AATGTGAAAGGCTTAAGGAAAGTGGGTGTAAAGACCCTCAAGTGGATGCC	17	-	27441852-27441901		PREDICTED: Homo sapiens similar to fetal Alzheimer antigen isoform 2 (LOC646084), mRNA.					
Homo sapiens	RefSeq	NM_018019.2	ILMN_19228	MED9	NM_018019.2	NM_018019.2		55090	22907057	NM_018019.2	MED9	NP_060489.1	ILMN_1794108	0002900477	S	2012	GGGTGGGCCTGTTTTAAGGCTCTGACAGATACCACGAAACATGAAGCACG	17	+	17337049-17337098	17p11.2g	Homo sapiens mediator complex subunit 9 (MED9), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14638676] [evidence IPI]	MGC138234; MED25; FLJ10193	MGC138234; MED25; FLJ10193
Homo sapiens	RefSeq	NM_013241.1	ILMN_14837	FHOD1	NM_013241.2	NM_013241.2		29109	118572598	NM_013241.2	FHOD1	NP_037373.2	ILMN_1651776	0000050129	S	3594	GCCTGGAGGTGTGAAGGTGCTGTATCCCGGAAATCTATCTGGACCCTGGA	16	-	67263502-67263538:67263539-67263551	16q22.1a	Homo sapiens formin homology 2 domain containing 1 (FHOD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10352228] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10352228] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	FHOS	FHOS
Homo sapiens	RefSeq	NM_012083.2	ILMN_164196	FRAT2	NM_012083.2	NM_012083.2		23401	31317237	NM_012083.2	FRAT2	NP_036215.1	ILMN_1788213	0007330026	S	1966	TGTGACTCTCCCAGAGAAGAAGCCGCTGGCTGTATGAAACTTGACGGCGC	10	-	99092443-99092492	10q24.1b	Homo sapiens frequently rearranged in advanced T-cell lymphomas 2 (FRAT2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9635432] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9635432] [evidence NAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC10562	MGC10562
Homo sapiens	RefSeq	NM_201348.1	ILMN_18101	PRELP	NM_201348.1	NM_201348.1		5549	41349453	NM_201348.1	PRELP	NP_958505.1	ILMN_2395156	0007000446	A	5222	GACGCCCTCGCTGCTCCTACCTGGCTACTAAACATCGACTTCGGTTCACT	1	+	201726515-201726564	1q32.1e	Homo sapiens proline/arginine-rich end leucine-rich repeat protein (PRELP), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 7592739] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 7592739] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 7592739] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MSTP161; SLRR2A; MST161; MGC45323	MSTP161; SLRR2A; MST161; MGC45323
Homo sapiens	RefSeq	XM_930893.1	ILMN_42639	LOC642398	XM_926013.2	XM_926013.2		642398	113429151	XM_926013.2	LOC642398	XP_931106.1	ILMN_1756407	0000020343	A	2533	AGTGCCCCATTTCCCTCCTCCACCTGTCTGACCTGGCATTCCTATTTTGG	21	-	38237-38286		PREDICTED: Homo sapiens hypothetical LOC642398, transcript variant 1 (LOC642398), mRNA.					
Homo sapiens	RefSeq	XM_926013.1	ILMN_42639	LOC642398	XM_926013.2	XM_926013.2		642398	113429151	XM_926013.2	LOC642398	XP_931106.1	ILMN_1786382	0000630273	I	5274	GTGTGCAGTAAGCAGAGCATTTTTAGCCACTTACCTCTACAATGTTCCTG	21	-	35496-35545		PREDICTED: Homo sapiens hypothetical LOC642398, transcript variant 1 (LOC642398), mRNA.					
Homo sapiens	RefSeq	XM_930555.1	ILMN_169645	KIR2DL4	NM_002255.5	NM_002255.5		3805	124107605	NM_002255.5	KIR2DL4	NP_002246.5	ILMN_1693207	0002140719	S	1223	CTGGTGCCTGTCTCTTGCTTACCAATGTCTAAGGTCCCCACTGCCTGCTG	19	+	67766-67815	19q13.42b	Homo sapiens killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 4 (KIR2DL4), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8946682] [evidence TAS]	A defense response that is mediated by cells [goid 6968] [pmid 8946682] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8946682] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 8946682] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	G9P; CD158D; 15.212; 103AS; KIR103; KIR103AS	
Homo sapiens	RefSeq	XM_001726105.1	ILMN_336920	ANKRD18A	XM_001726105.1	XM_001726105.1		253650	169180141	XM_001726105.1	ANKRD18A	XP_001726157.1	ILMN_3255211	0007160022	M	3372	CCAACAGAAGAACCACTGTCGCATCCACTGAGAGCAGGACAAACAGGCCC	9	-	38533342-38533360:38561119-38561149	9p13.1b	PREDICTED: Homo sapiens ankyrin repeat domain 18A (ANKRD18A), mRNA.					
Homo sapiens	RefSeq	XR_038347.1	ILMN_346926	LOC100130513	XR_038347.1	XR_038347.1		100130513	169165331	XR_038347.1	LOC100130513		ILMN_3266775	0005890431	M	396	AGTACTGTGGGACGCCAAGGCAGGCGGATCAGTTGAGTCCAGGAGTTTGA				3p25.3c	PREDICTED: Homo sapiens misc_RNA (LOC100130513), miscRNA.					
Homo sapiens	RefSeq	NM_016024.2	ILMN_163765	RBMX2	NM_016024.2	NM_016024.2		51634	118600972	NM_016024.2	RBMX2	NP_057108.2	ILMN_2056551	0004390164	S	1271	GGCTCTTGAACCCATAGACCCCAGTTGAAGATGGAATTTTCAGGAAAGGG	X	+	129374741-129374790	Xq25h	Homo sapiens RNA binding motif protein, X-linked 2 (RBMX2), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CGI-79	CGI-79
Homo sapiens	RefSeq	NM_001686.3	ILMN_759	ATP5B	NM_001686.3	NM_001686.3		506	50345985	NM_001686.3	ATP5B	NP_001677.2	ILMN_1772132	0004540021	S	1683	GCATTCATCGTGAGGGGTCTTTGTCCTCTGTACTGTCTCTCTCCTTGCCC	12	-	57032069-57032106:57032107-57032118	12q13.3a	Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide (ATP5B), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 2870059] [evidence IDA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 12110673] [evidence IDA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 2900241] [evidence NAS]; The hexamer, comprising three alpha and three beta subunits, that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase [goid 5754] [pmid 2687158] [evidence NAS]; The hexamer, comprising three alpha and three beta subunits, that possesses the catalytic activity of the mitochondrial hydrogen-transporting ATP synthase [goid 5754] [pmid 2870059] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 2687158] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 4517936] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10077593] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 17510399] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled [goid 45261] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 17510399] [evidence IMP]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 2870059] [evidence NAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 17510399] [evidence IMP]; Any process that modulates the internal pH of a cell, measured by the concentration of the hydrogen ion [goid 51453] [pmid 17510399] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 2870059] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11410595] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12110673] [evidence IDA]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 17643490] [evidence IDA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [pmid 10077593] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [pmid 17510399] [evidence IMP]	ATPMB; MGC5231; ATPSB	ATPMB; ATPSB; MGC5231
Homo sapiens	RefSeq	NM_022169.3	ILMN_10212	ABCG4	NM_022169.3	NM_022169.3		64137	47078219	NM_022169.3	ABCG4	NP_071452.2	ILMN_1779470	0003360390	S	3715	TCCCTGTCTACCTCCTCTCACCCTGCCACAGATTCTTCCTATCACACAGG	11	+	118538464-118538513	11q23.3e	Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 4 (ABCG4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16870176] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16870176] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	WHITE2	WHITE2
Homo sapiens	RefSeq	XM_001714522.1	ILMN_337438	FLJ37512	XM_001714522.1	XM_001714522.1		643792	169184329	XM_001714522.1	FLJ37512	XP_001714574.1	ILMN_3237826	0000020368	S	483	GGCGGCGACTAGTGGCTTCACTGGCTGCCTCTCGGCGGTGCGCTTCGGCT	9	-	47094279-47094328	9p11.1b	PREDICTED: Homo sapiens similar to Contactin-associated protein-like 3 precursor (Cell recognition molecule Caspr3) (FLJ37512), mRNA.					
Homo sapiens	RefSeq	NM_001031806.1	ILMN_15882	ALDH3A2	NM_000382.2	NM_000382.2		224	73465985	NM_000382.2	ALDH3A2	NP_000373.1	ILMN_1794825	0001690608	A	3160	GGTACTCTGCTGAGTGGGCAAGGCTGAAGAAGAGGCCTGTGGAATGCAGC	17	+	19520958-19521007	17p11.2d	Homo sapiens aldehyde dehydrogenase 3 family, member A2 (ALDH3A2), transcript variant 2, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8528251] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8528251] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [pmid 8528251] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 8528251] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [pmid 8528251] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DKFZp686E23276; FALDH; ALDH10; FLJ20851; SLS	DKFZp686E23276; FALDH; ALDH10; FLJ20851; SLS
Homo sapiens	RefSeq	NM_006194.1	ILMN_1638	PAX9	NM_006194.2	NM_006194.2		5083	154350239	NM_006194.2	PAX9	NP_006185.1	ILMN_1731506	0006350138	S	1829	CTCCTGCCCTCCAACCCTTCTGCCTTGAAAGCTGGCTGTACGGACTCACA	14	+	36215494-36215543	14q13.3a	Homo sapiens paired box 9 (PAX9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]		
Homo sapiens	RefSeq	XM_935950.1	ILMN_44546	LOC641929	XM_935950.1	XM_935950.1		641929	89026797	XM_935950.1	LOC641929	XP_941043.1	ILMN_1669418	0002810736	S	61	GCTAGGATAAGGTGCATGGATCCCCTGAGCCTACATTTTCTCATTTTATA					PREDICTED: Homo sapiens hypothetical protein LOC641929 (LOC641929), mRNA.					
Homo sapiens	RefSeq	NM_021960.3	ILMN_18397	MCL1	NM_021960.3	NM_021960.3		4170	33519459	NM_021960.3	MCL1	NP_068779.1	ILMN_1756806	0007380100	I	870	CTCGAGTGATGATCCATGTTTTCAGCGACGGCGTAACAAACTGGGGCAGG	1	-	150550866-150550915	1q21.2c	Homo sapiens myeloid cell leukemia sequence 1 (BCL2-related) (MCL1), transcript variant 1, mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [pmid 2308163] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10837489] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10837489] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence NAS]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [pmid 10837489] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10837489] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8790944] [evidence TAS]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [pmid 7682708] [evidence TAS]; Any process involved in the maintenance of an internal equilibrium at the level of the cell [goid 19725] [pmid 10837489] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10837489] [evidence IDA];  [goid 15266] [pmid 10837489] [evidence TAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10837489] [evidence IPI]	MCL1L; MGC104264; MGC1839; TM; MCL1S; EAT	MCL1L; MGC104264; MGC1839; TM; MCL1S; EAT
Homo sapiens	RefSeq	NM_021960.3	ILMN_18397	MCL1	NM_021960.3	NM_021960.3		4170	33519459	NM_021960.3	MCL1	NP_068779.1	ILMN_1803988	0000610750	A	3686	GTGCTGACTGGCTACGTAGTTCGGGCAAATCCTCCAAAAGGGAAAGGGAG	1	-	150547298-150547347	1q21.2c	Homo sapiens myeloid cell leukemia sequence 1 (BCL2-related) (MCL1), transcript variant 1, mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [pmid 2308163] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10837489] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10837489] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence NAS]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [pmid 10837489] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10837489] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8790944] [evidence TAS]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [pmid 7682708] [evidence TAS]; Any process involved in the maintenance of an internal equilibrium at the level of the cell [goid 19725] [pmid 10837489] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10837489] [evidence IDA];  [goid 15266] [pmid 10837489] [evidence TAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10837489] [evidence IPI]	MCL1L; MGC104264; MGC1839; TM; MCL1S; EAT	MCL1L; MGC104264; MGC1839; TM; MCL1S; EAT
Homo sapiens	RefSeq	NM_002555.3	ILMN_20563	SLC22A18	NM_002555.3	NM_002555.3		5002	34734074	NM_002555.3	SLC22A18	NP_002546.2	ILMN_2382505	0007400053	A	1290	AGGGACCATGCTGGGCCTCTGCGCCTCTGTACAACCACTGCTCCGAACTC	11	+	2900362-2900362:2902816-2902864	11p15.4d	Homo sapiens solute carrier family 22 (organic cation transporter), member 18 (SLC22A18), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9744804] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9499412] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 9744804] [evidence TAS]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 9744804] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9499412] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	IMPT1; ORCTL2; BWSCR1A; BWR1A; ITM; TSSC5; SLC22A1L; HET; p45-BWR1A; DKFZp667A184	IMPT1; ORCTL2; BWSCR1A; BWR1A; ITM; TSSC5; SLC22A1L; HET; p45-BWR1A; DKFZp667A184
Homo sapiens	RefSeq	NR_003192.1	ILMN_166104	SNHG8	NR_003192.1	NR_003192.1		440957	115391996	NR_003192.1	SNHG8		ILMN_2050921	0002260497	S	5548	GCCTCAGAAAGACAGTATCAGAGAAGGCTGGAAGATGAATGAGACTGAAC				3p21.1d	Homo sapiens small nucleolar RNA host gene (non-protein coding) 8 (SNHG8) on chromosome 3.					
Homo sapiens	RefSeq	XM_941462.1	ILMN_166104	SNHG8	NR_003192.1	NR_003192.1		440957	115391996	NR_003192.1	SNHG8		ILMN_1815658	0007050722	A	5748	CTGTCTCTGCTTGAGTACTTCCCAAGTCACTGCTGGACAGCACTTGTGGG				3p21.1d	Homo sapiens small nucleolar RNA host gene (non-protein coding) 8 (SNHG8) on chromosome 3.					
Homo sapiens	RefSeq	XM_373214.1	ILMN_4268	LOC392145	XM_373214.1	XM_373214.1		392145	41147589	XM_373214.1	LOC392145	XP_373214.1	ILMN_1674758	0001260427	S	105	GCTGTCCTCCATGCCACCAACTCTAAAAAGGGGCCTGCTCTGTGACTTCC	7	+	147762676-147762707:147773818-147773835	7q36.1a	PREDICTED: Homo sapiens similar to Mtr3 (mRNA transport regulator 3)-homolog (LOC392145), mRNA.					
Homo sapiens	RefSeq	NM_170603.1	ILMN_17442	RASGRP4	NM_170603.1	NM_170603.1		115727	26051255	NM_170603.1	RASGRP4	NP_733748.1	ILMN_2395827	0004830064	A	2189	CCGGTGATGGACCCACCATCAACTGCATCCTCCAAGCTGGATTCCTAGAC	19	-	43592517-43592519:43592520-43592566	19q13.2a	Homo sapiens RAS guanyl releasing protein 4 (RASGRP4), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11880369] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 11880369] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11880369] [evidence TAS]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 11880369] [evidence NAS]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 11880369] [evidence NAS]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 11880369] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11880369] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 9991] [pmid 11880369] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 9991] [evidence ISS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence ISS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 11880369] [evidence IDA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [pmid 11880369] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [pmid 11880369] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [evidence ISS]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [pmid 11880369] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [pmid 11880369] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [pmid 11880369] [evidence NAS]		
Homo sapiens	RefSeq	NM_016076.2	ILMN_176788	PPPDE1	NM_016076.3	NM_016076.3		51029	112293257	NM_016076.3	PPPDE1	NP_057160.2	ILMN_1660840	0003870255	S	3586	GAGGAGATTCAACACCACAGACAGCTGCAGGACTCGATATCCATGGCTTC	1	+	242938451-242938500	1q44b	Homo sapiens PPPDE peptidase domain containing 1 (PPPDE1), mRNA.				FLJ21998; PNAS-4; C1orf121; CGI-146	FLJ21998; PNAS-4; CGI-146
Homo sapiens	RefSeq	NM_007250.2	ILMN_46608	KLF8	NM_007250.3	NM_007250.3		11279	89111942	NM_007250.3	KLF8	NP_009181.2	ILMN_1788793	0000610427	S	2048	GCAGCCCACTGAGCCAAGTTGAGGAGACTGGAGGAAAAGAGAGCTGGTCT	X	+	56327759-56327808	Xp11.21a	Homo sapiens Kruppel-like factor 8 (KLF8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC138314; DKFZp686O08126; ZNF741; BKLF3; DXS741	MGC138314; DKFZp686O08126; ZNF741; BKLF3; DXS741
Homo sapiens	RefSeq	XM_945626.1	ILMN_45383	PMS2L1	XM_945626.1	XM_945626.1		5379	89026188	XM_945626.1	PMS2L1	XP_950719.1	ILMN_1752028	0006400239	I	180	CTGGGATTACAGGCATGAACCACCGCGCCTGGCCCCCGTTCTCCTTACTG				7q22.1c	PREDICTED: Homo sapiens postmeiotic segregation increased 2-like 1, transcript variant 8 (PMS2L1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10101297] [evidence ND ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 10101297] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10101297] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]		
Homo sapiens	RefSeq	XR_037932.1	ILMN_334465	LOC649887	XR_037932.1	XR_037932.1		649887	169218307	XR_037932.1	LOC649887		ILMN_3235277	0004880647	S	122	GGAATGGCAGGCCCTGGCGGTTTGGCGCGCAACAGCCGGAACAAGTACAT					PREDICTED: Homo sapiens misc_RNA (LOC649887), partial miscRNA.					
Homo sapiens	RefSeq	NM_001039895.1	ILMN_42552	LOC642947	NM_001039895.1	NM_001039895.1		642947	90017679	NM_001039895.1	LOC642947	NP_001034984.1	ILMN_2049343	0000830673	S	1660	GAGAATCACTTGATCCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCGTG	9	+	79000381-79000430	9q21.13c	Homo sapiens hypothetical protein LOC642947 (LOC642947), mRNA.					
Homo sapiens	RefSeq	XM_929212.1	ILMN_46326	LOC646266	XM_929212.1	XM_929212.1		646266	89027881	XM_929212.1	LOC646266	XP_934305.1	ILMN_1660247	0005340491	S	13	GATTCCAACTCGGTAGTGGATGGAAGTGATGTTGAGTCTATTGCCGGAAG	8	-	11938568-11938575:11966214-11966255		PREDICTED: Homo sapiens similar to Beta-defensin 131 precursor (Beta-defensin 31) (DEFB-31) (LOC646266), mRNA.					
Homo sapiens	RefSeq	NM_020649.1	ILMN_16376	CBX8	NM_020649.1	NM_020649.1		57332	10190681	NM_020649.1	CBX8	NP_065700.1	ILMN_1775183	0001410475	S	1276	TGTGTCCAGGAGGAGAGCAGGGGAGAGAGTGAGCGTGAGCTTGGCATAGT	17	-	77768371-77768420	17q25.3d	Homo sapiens chromobox homolog 8 (Pc class homolog, Drosophila) (CBX8), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PC3; RC1; HPC3	PC3; RC1; HPC3
Homo sapiens	Unigene	Hs.390407	ILMN_89369	HS.390407	Hs.390407		Hs.390407		27828963	BX097705			ILMN_1906423	0005310327	S	640	GAGAGGCAGGGTGAAGAGGTCGAAGGAGCCTGAGTTAGCAGGGATGAGCA	2	-	87520225-87520274		BX097705 NCI_CGAP_Kid5 Homo sapiens cDNA clone IMAGp998E053890, mRNA sequence					
Homo sapiens	RefSeq	NM_033100.1	ILMN_174795	PCDH21	NM_033100.1	NM_033100.1		92211	16933564	NM_033100.1	PCDH21	NP_149091.1	ILMN_1663716	0002370307	S	5115	TGAGGCCAGCCAAGTCCCTGTGTTACGAATGGTGGGCCAAGGGGCTGTCT	10	+	85966030-85966079	10q23.1c	Homo sapiens protocadherin 21 (PCDH21), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IEA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp434A132; KIAA1775	DKFZp434A132; KIAA1775
Homo sapiens	RefSeq	XM_942801.1	ILMN_14196	AMY2A	NM_000699.2	NM_000699.2		279	21359830	NM_000699.2	AMY2A	NP_000690.1	ILMN_1801303	0003130296	A	1403	GATGACTGGTCATTTTCTTTAACTTTGCAAACTGGTCTTCCTGCTGGCAC	1	+	103968359-103968366:103969702-103969743	1p21.1c	Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 6336237] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2788608] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides containing three or more 1,4-alpha-linked D-glucose units [goid 4556] [pmid 6336237] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	PA; AMY2; AMY2B	
Homo sapiens	RefSeq	NM_000699.2	ILMN_14196	AMY2A	NM_000699.2	NM_000699.2		279	21359830	NM_000699.2	AMY2A	NP_000690.1	ILMN_2131123	0002450347	S	1581	ATGCTGAATCTAAATTGTAAAATTTAAAATTAAATGCATGTCCTCAAAAC	1	+	103969872-103969891:103969892-103969921	1p21.1c	Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 6336237] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2788608] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides containing three or more 1,4-alpha-linked D-glucose units [goid 4556] [pmid 6336237] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	PA; AMY2; AMY2B	PA; AMY2; AMY2B
Homo sapiens	RefSeq	NM_004038.3	ILMN_14196	AMY2A	NM_000699.2	NM_000699.2		279	21359830	NM_000699.2	AMY2A	NP_000690.1	ILMN_1719031	0001440403	A	276	GACCTTGGTGGGAAAGATACCAACCAGTTAGCTATAAATTATGCACAAGA	1	+	103962142-103962191	1p21.1c	Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 6336237] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2788608] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides containing three or more 1,4-alpha-linked D-glucose units [goid 4556] [pmid 6336237] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	PA; AMY2; AMY2B	AMY1; AMY1B
Homo sapiens	RefSeq	NM_000699.2	ILMN_14196	AMY2A	NM_000699.2	NM_000699.2		279	21359830	NM_000699.2	AMY2A	NP_000690.1	ILMN_1751102	0007380121	S	923	GAGAAGATGTCTTACTTAAAGAACTGGGGAGAAGGTTGGGGTTTCGTACC	1	+	103964810-103964829:103965722-103965751	1p21.1c	Homo sapiens amylase, alpha 2A (pancreatic) (AMY2A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 6336237] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2788608] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides containing three or more 1,4-alpha-linked D-glucose units [goid 4556] [pmid 6336237] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	PA; AMY2; AMY2B	PA; AMY2; AMY2B
Homo sapiens	RefSeq	XM_927579.1	ILMN_42336	LOC644436	XM_927579.1	XM_927579.1		644436	89034048	XM_927579.1	LOC644436	XP_932672.1	ILMN_1742833	0000520703	S	91	AAAGGCATGGAGGAGGGAGAGTTCTCTGAGGCCCTGGAGGATATGGGTGT	11	+	62572059-62572108	11q12.3b	PREDICTED: Homo sapiens similar to Tubulin alpha-4 chain (Alpha-tubulin 4) (Alpha-tubulin isotype M-alpha-4) (LOC644436), mRNA.					
Homo sapiens	RefSeq	NM_004038.3	ILMN_176350	AMY1A	NM_004038.3	NM_004038.3		276	57014084	NM_004038.3	AMY1A	NP_004029.2	ILMN_2294762	0001740220	I	181	TTACGTTATCTACCAGAGCACCGTGGGCTGTTACTTGCCTTGAGTTGGAA	1	+	104000005-104000054	1p21.1c	Homo sapiens amylase, alpha 1A (salivary) (AMY1A), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2423416] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 2423416] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides containing three or more 1,4-alpha-linked D-glucose units [goid 4556] [pmid 2423416] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16203048] [evidence IPI]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	AMY1; AMY1B	AMY1; AMY1B
Homo sapiens	RefSeq	NM_004038.3	ILMN_176350	AMY1A	NM_004038.3	NM_004038.3		276	57014084	NM_004038.3	AMY1A	NP_004029.2	ILMN_2408219	0004180626	A	1813	TGCTGAATCTAAATTGTAAAATTTAAAATTAAATGCAAATCCGCAAAGCA	1	+	104008647-104008665:104008666-104008696	1p21.1c	Homo sapiens amylase, alpha 1A (salivary) (AMY1A), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2423416] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 2423416] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in polysaccharides containing three or more 1,4-alpha-linked D-glucose units [goid 4556] [pmid 2423416] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16203048] [evidence IPI]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	AMY1; AMY1B	AMY1; AMY1B
Homo sapiens	RefSeq	NM_020529.1	ILMN_6745	NFKBIA	NM_020529.1	NM_020529.1		4792	10092618	NM_020529.1	NFKBIA	NP_065390.1	ILMN_1773154	0004280113	S	992	GAGGACGAGCTGCCCTATGATGACTGTGTGTTTGGAGGCCAGCGTCTGAC	14	-	34940976-34941017:34941351-34941358	14q13.2b	Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha (NFKBIA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7679069] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 3140380] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10723127] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10747850] [evidence TAS]; The selective interaction of the transcription factor NF-kappaB with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 7253] [evidence NAS]; The series of molecular signals generated in response to detection of lipopolysaccharide [goid 31663] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]; Any process that modulates the frequency, rate or extent of the transfer of NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters, from the cytoplasm into the nucleus, across the nuclear membrane [goid 42345] [pmid 3140380] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [pmid 3140380] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the Notch signaling pathway [goid 45746] [evidence IEA]	Interacting selectively with a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus [goid 8139] [pmid 1493333] [evidence IPI]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [pmid 9859996] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16951195] [evidence IPI]; Interacting selectively with NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters [goid 51059] [pmid 7739562] [evidence IPI]	IKBA; NFKBI; MAD-3	IKBA; NFKBI; MAD-3
Homo sapiens	RefSeq	NM_183422.1	ILMN_166165	TSC22D1	NM_183422.1	NM_183422.1		8848	34556206	NM_183422.1	TSC22D1	NP_904358.1	ILMN_2412380	0000380689	A	4539	TGGCACAGTTACTCACTTTGTGTAATCTGAAATCTAGCTGCTGAATACGC	13	-	43905886-43905935	13q14.11e	Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9022669] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	TSC22; RP11-269C23.2; DKFZp686O19206; TGFB1I4; MGC17597	TSC22; RP11-269C23.2; DKFZp686O19206; TGFB1I4; MGC17597
Homo sapiens	RefSeq	NM_183422.1	ILMN_166165	TSC22D1	NM_183422.1	NM_183422.1		8848	34556206	NM_183422.1	TSC22D1	NP_904358.1	ILMN_1711091	0007320670	I	3330	GCAGCCTCTGCTTCTCTTTTCCCGTTGAAGGTGCTACCGCTGACGACACC	13	-	44045322-44045371	13q14.11e	Homo sapiens TSC22 domain family, member 1 (TSC22D1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9022669] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	TSC22; RP11-269C23.2; DKFZp686O19206; TGFB1I4; MGC17597	TSC22; RP11-269C23.2; DKFZp686O19206; TGFB1I4; MGC17597
Homo sapiens	RefSeq	NR_024468.1	ILMN_371248	LOC730811	NR_024468.1	NR_024468.1		730811	213417729	NR_024468.1	LOC730811		ILMN_3244358	0001570026	S	2575	CCCATCGAGCCCTGCTAGACACCACTGCAGTCTGAAAGCAAGGAAAGCTT	2	+	2330213-2330262		Homo sapiens hypothetical protein LOC730811 (LOC730811), non-coding RNA.					
Homo sapiens	RefSeq	XR_039052.1	ILMN_335580	LOC440180	XR_039052.1	XR_039052.1		440180	169207284	XR_039052.1	LOC440180		ILMN_3276319	0004900441	M	1199	CCCTTCAAAACCATCAGCCTTAGCATATTGCTGTCACTGCATGCAAAAGG				14q23.1a	PREDICTED: Homo sapiens misc_RNA (LOC440180), miscRNA.					
Homo sapiens	RefSeq	XR_039052.1	ILMN_335580	LOC440180	XR_039052.1	XR_039052.1		440180	169207284	XR_039052.1	LOC440180		ILMN_3199846	0002320682	A	1642	CCCAGAAGCCTTCCAAGCTCCAAGCCCTTTCATCATTCATCGCATTGCCA				14q23.1a	PREDICTED: Homo sapiens misc_RNA (LOC440180), miscRNA.					
Homo sapiens	RefSeq	XM_001125992.1	ILMN_170607	LOC730393	XM_001125992.1	XM_001125992.1		730393	113416956	XM_001125992.1	LOC730393	XP_001125992.1	ILMN_3246970	0007050360	S	17	CTTGGGTGGGAGGGCTTCTCCAGGGCAAGGCTCTGTATGTGGATGTGATC	5	+	70215703-70215731:70216366-70216386		PREDICTED: Homo sapiens similar to SMA5 (LOC730393), mRNA.					
Homo sapiens	RefSeq	NM_025184.2	ILMN_163242	EFHC2	NM_025184.3	NM_025184.3		80258	148746212	NM_025184.3	EFHC2	NP_079460.2	ILMN_1791302	0003830563	S	2298	CTGGACCTTTTTGAAGGACGCGTTTGGCTTAGAGGAGGAATAACCATGCC	X	-	44037623-44037672	Xp11.3c-p11.3b	Homo sapiens EF-hand domain (C-terminal) containing 2 (EFHC2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp686G08235; FLJ22601; FLJ22843; dJ1158H2.1	DKFZp686G08235; FLJ22601; FLJ22843; dJ1158H2.1
Homo sapiens	RefSeq	NM_004845.3	ILMN_181970	PCYT1B	NM_004845.3	NM_004845.3		9468	66348059	NM_004845.3	PCYT1B	NP_004836.2	ILMN_1811597	0005550050	S	5307	GGTGCTGAATAACGCGAACTACTGGAATCAGCCTCCCCCAACTCTGCGCG	X	-	24486215-24486264	Xp22.11a	Homo sapiens phosphate cytidylyltransferase 1, choline, beta (PCYT1B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9593753] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [pmid 9593753] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the reaction: CTP + choline phosphate = diphosphate + CDP-choline [goid 4105] [pmid 9593753] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CCT-beta; CTB	CCT-beta; CTB
Homo sapiens	RefSeq	XM_042936.6	ILMN_170753	GRIP2	NM_001080423.1	NM_001080423.1		80852	122937248	NM_001080423.1	GRIP2	NP_001073892.1	ILMN_1686416	0002360438	I	27	GGCTGTAGATGGAGGGAATGGAGGCGAGTGGGGTGAGGATCTGTTAGAGC	3	-	14583512-14583561	3p25.1a	Homo sapiens glutamate receptor interacting protein 2 (GRIP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_944910.1	ILMN_170753	GRIP2	NM_001080423.1	NM_001080423.1		80852	122937248	NM_001080423.1	GRIP2	NP_001073892.1	ILMN_1693827	0005310154	A	948	GCGGCAGTGCAGCCACGAGGCACTCTTTCAGGTGGAGTATGATGTGGCCA	3	-	14563154-14563203	3p25.1a	Homo sapiens glutamate receptor interacting protein 2 (GRIP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_001080423.1	ILMN_170753	GRIP2	NM_001080423.1	NM_001080423.1		80852	122937248	NM_001080423.1	GRIP2	NP_001073892.1	ILMN_2406897	0002690053	A	3075	AATGGAGGAGCTGTTGCTGCCTACACCCTTGGAGATGCACAAGGTGACCC	3	-	14547196-14547245	3p25.1a	Homo sapiens glutamate receptor interacting protein 2 (GRIP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_052995.2	ILMN_1884	CLRN1	NM_052995.2	NM_052995.2		7401	28144906	NM_052995.2	CLRN1	NP_443721.1	ILMN_1698745	0006620142	I	1066	ACACCTGGACAATTTCTAGAAGACTACAATTCAGTCTAGCCACAAAGGGG	3	-	152126968-152127017	3q25.1b	Homo sapiens clarin 1 (CLRN1), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 15650299] [evidence IMP]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [pmid 15521980] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive an orientational stimulus, convert it to a molecular signal, and recognize and characterize the signal. Equilibrioception refers to a combination of processes by which an organism can perceive its orientation with respect to gravity. In animals, stimuli come from labyrinth system of the inner ears, monitoring the direction of motion; visual stimuli, with information on orientation and motion; pressure receptors, which tell the organism which body surfaces are in contact with the ground; and proprioceptive cues, which report which parts of the body are in motion [goid 50957] [pmid 15521980] [evidence IMP]		USH3A; USH3	USH3A; USH3
Homo sapiens	RefSeq	NM_001085400.1	ILMN_308338	RELL1	NM_001085400.1	NM_001085400.1		768211	146094507	NM_001085400.1	RELL1	NP_001078869.1	ILMN_3233388	0001710730	I	3243	GCGGTTTTTGTCTGGCAGGCTTCCAAATTTGCCAAAATTAAGCGTTCAGT	4	-	37612581-37612630	4p14e-p14d	Homo sapiens RELT-like 1 (RELL1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC50583; FLJ21778	MGC50583; FLJ21778
Homo sapiens	RefSeq	NR_024444.1	ILMN_369867	LOC100133985	NR_024444.1	NR_024444.1		100133985	212720746	NR_024444.1	LOC100133985		ILMN_3235101	0002490546	S	323	CTCTACTTGGATCTGAGAACTCTGTCCCTCCAGCCCTGCGAGCGCTTTGC	2	-	70351456-70351505		Homo sapiens hypothetical protein LOC100133985 (LOC100133985), non-coding RNA.					
Homo sapiens	RefSeq	XM_001717165.1	ILMN_349399	LOC728361	XM_001717165.1	XM_001717165.1		728361	169213363	XM_001717165.1	LOC728361	XP_001717217.1	ILMN_3228369	0000240066	A	498	CCACCTGTGCCGCTGTTGTGGCAAGGGCTTTCATGACGCCTTCGATCTCA	19	+	41295633-41295682	19q13.12b	PREDICTED: Homo sapiens hypothetical LOC728361 (LOC728361), mRNA.					
Homo sapiens	RefSeq	XM_926708.1	ILMN_37940	LOC642976	XM_926708.1	XM_926708.1		642976	89058146	XM_926708.1	LOC642976	XP_931801.1	ILMN_1658375	0006620709	S	61	GTGTCCCTGGAAGCTACACAAAGTCCTCTTTGATTGCCTGTGATCAAAGC	21	+	30043194-30043243	21q21.3c	PREDICTED: Homo sapiens hypothetical protein LOC642976 (LOC642976), mRNA.					
Homo sapiens	RefSeq	NM_214461.1	ILMN_9956	C2ORF27B	NM_214461.1	NM_214461.1		408029	47551355	NM_214461.1	C2orf27B	NP_999626.1	ILMN_1781774	0002100730	S	432	GACTTCTGTGCCAGCGGTCCCAACACCCACGCCTTCAGGAAGACACATGT	2	-	132558522-132558571	2q21.2a	Homo sapiens chromosome 2 open reading frame 27B (C2orf27B), mRNA.					
Homo sapiens	RefSeq	NM_214461.1	ILMN_9956	C2ORF27B	NM_214461.1	NM_214461.1		408029	47551355	NM_214461.1	C2orf27B	NP_999626.1	ILMN_2089316	0002120446	S	1282	ATTTCTACCATAACACTGAATAAAGTTTGACTTTTTGAAACTTCAAAAAA	2	-	132275698-132275704:132552534-132552576	2q21.2a	Homo sapiens chromosome 2 open reading frame 27B (C2orf27B), mRNA.					
Homo sapiens	RefSeq	NM_002503.3	ILMN_9874	NFKBIB	NM_002503.3	NM_002503.3		4793	48928015	NM_002503.3	NFKBIB	NP_002494.2	ILMN_1690473	0002360537	A	1000	TAGCGACAGCGACAGCGGAGACGAGGGCGATGAATACGACGACATTGTGG	19	+	39398272-39398299:39399371-39399392	19q13.2a	Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta (NFKBIB), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10723127] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 7776974] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7776974] [evidence TAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 7776974] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 7776974] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10498867] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14743216] [evidence IPI]	TRIP9; IKBB	TRIP9; IKBB
Homo sapiens	RefSeq	NM_002503.3	ILMN_9874	NFKBIB	NM_002503.3	NM_002503.3		4793	48928015	NM_002503.3	NFKBIB	NP_002494.2	ILMN_1674152	0007560414	I	244	GCACTTGGCTGTGATTCATCAGCATGAACCCTTCCTGGATTTTCTTCTAG	19	+	39395661-39395710	19q13.2a	Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta (NFKBIB), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10723127] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 7776974] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7776974] [evidence TAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 7776974] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 7776974] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10498867] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14743216] [evidence IPI]	TRIP9; IKBB	TRIP9; IKBB
Homo sapiens	RefSeq	NR_024479.1	ILMN_369878	LOC100131726	NR_024479.1	NR_024479.1		100131726	213512033	NR_024479.1	LOC100131726		ILMN_3235180	0002480685	S	997	CACAGGGATTGGAGAGCTGGTGACCCTAGTCAAGGAAGCTGGTGACCCTG	8	-	124213523-124213572	8q24.13b	Homo sapiens HCC-related HCC-C11_v3 (LOC100131726), non-coding RNA.					
Homo sapiens	RefSeq	NM_032021.2	ILMN_29526	TMEM133	NM_032021.2	NM_032021.2		83935	23510354	NM_032021.2	TMEM133	NP_114410.1	ILMN_1730516	0003780386	S	1460	CTGAGCTGAAACCTTAACAAATAGGGAATTTGGCAGGGAAGACACCTGGG	11	+	100369480-100369529	11q22.1c	Homo sapiens transmembrane protein 133 (TMEM133), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AD031; MGC138255	AD031; MGC138255
Homo sapiens	RefSeq	XM_943053.1	ILMN_39627	LOC647843	XM_943053.1	XM_943053.1		647843	89035881	XM_943053.1	LOC647843	XP_948146.1	ILMN_1730097	0002100167	S	721	TGTAGCTTACAATTTTGTGGATTGGGAATTAGAGCCTGTCTCATCTGGGC					PREDICTED: Homo sapiens hypothetical protein LOC647843 (LOC647843), mRNA.					
Homo sapiens	RefSeq	NM_030789.2	ILMN_20556	HM13	NM_178580.1	NM_178580.1		81502	30581108	NM_178580.1	HM13	NP_848695.1	ILMN_1807833	0001050746	A	422	TCCTGCTGTCCATGTATTTCTTCGTGCTGGGAATCCTGGCCCTGTCCCAC	20	+	29589668-29589717	20q11.21b	Homo sapiens histocompatibility (minor) 13 (HM13), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MSTP086; H13; IMPAS; SPP; IMP1; PSL3; PSENL3; dJ324O17.1	MSTP086; IMPAS; dJ324O17.1; H13; SPP; IMP1; PSL3; PSENL3
Homo sapiens	RefSeq	NM_178580.1	ILMN_20556	HM13	NM_178580.1	NM_178580.1		81502	30581108	NM_178580.1	HM13	NP_848695.1	ILMN_1687833	0000770239	I	1298	AATGCCCAGCGGGTGCCCACCTGCCCGCTTCCCCCTACTGCCCCGGGGCC	20	+	29619691-29619692:29619693-29619740	20q11.21b	Homo sapiens histocompatibility (minor) 13 (HM13), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MSTP086; H13; IMPAS; SPP; IMP1; PSL3; PSENL3; dJ324O17.1	MSTP086; IMPAS; dJ324O17.1; H13; SPP; IMP1; PSL3; PSENL3
Homo sapiens	RefSeq	XM_926657.1	ILMN_44363	LOC643311	XM_926657.1	XM_926657.1		643311	89060157	XM_926657.1	LOC643311	XP_931750.1	ILMN_1800488	0006760184	S	190	GAGGAGGGTGAGCAGGCGGCAGGCCTGGCCGCAGTCCCCCAGGGCGGGAG	X	-	119893313-119893362	Xq24d	PREDICTED: Homo sapiens hypothetical protein LOC643311 (LOC643311), mRNA.					
Homo sapiens	Unigene	Hs.551755	ILMN_110708	HS.551755	Hs.551755		Hs.551755		51648441	CR740783			ILMN_1847948	0003140605	S	380	ACTGGAGAGGGGGCGTGTCCTCCAAATCTACCAACCAGAGACCTGGAAGG	4	-	153348083-153348124:153348126-153348133		CR740783 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGp971H1693 ; IMAGE:2297773 5, mRNA sequence					
Homo sapiens	RefSeq	NM_006751.3	ILMN_4525	SSFA2	NM_006751.4	NM_006751.4		6744	142382617	NM_006751.4	SSFA2	NP_006742.2	ILMN_1742260	0003990674	S	3539	GTGGCAAGGAAGAAAGTGTTCCGAGCATCGGTGGCTCTAACGCCAACAGC	2	+	182495136-182495185	2q31.3b	Homo sapiens sperm specific antigen 2 (SSFA2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1555770] [evidence NAS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	CS-1; FLJ45996; DKFZp313O1039; KRAP; KIAA1927; SPAG13; DKFZp779G0129; CS1	CS-1; FLJ45996; DKFZp313O1039; KRAP; KIAA1927; SPAG13; DKFZp779G0129; CS1
Homo sapiens	RefSeq	NM_003653.2	ILMN_172839	COPS3	NM_003653.2	NM_003653.2		8533	23238221	NM_003653.2	COPS3	NP_003644.2	ILMN_1770732	0001030551	S	1399	ACCATCTTGGCCAGTGACAAGTGTTCGGAGGGCAGCAGAGAGGACCAAGC	17	-	17150326-17150375	17p11.2h	Homo sapiens COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis) (COPS3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9535219] [evidence TAS]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [evidence IEA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9535219] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light [goid 9416] [pmid 9535219] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15861129] [evidence IPI]	SGN3	SGN3
Homo sapiens	RefSeq	NM_001005517.1	ILMN_8442	OR5K4	NM_001005517.1	NM_001005517.1		403278	53933286	NM_001005517.1	OR5K4	NP_001005517.1	ILMN_1727522	0004670736	S	187	CTGGGCAACCTGGCTCTGATGGATTCCTGCTGTTCCTGTGCTGTTACCCC	3	+	98072884-98072933	3q11.2c	Homo sapiens olfactory receptor, family 5, subfamily K, member 4 (OR5K4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_015097.1	ILMN_25670	CLASP2	NM_015097.1	NM_015097.1		23122	57863300	NM_015097.1	CLASP2	NP_055912.1	ILMN_1770548	0006350370	S	4689	GAGCAGTGTTCGGAAAGCTTGTGTCTTCTGCCTGGTGGCTGTTCATGCGG	3	-	33623097-33623146	3p22.3c-p22.3b	Homo sapiens cytoplasmic linker associated protein 2 (CLASP2), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11290329] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11290329] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Any of the spindle microtubules that attach to the kinetochores of chromosomes by their plus ends, and maneuver the chromosomes during mitotic or meiotic chromosome segregation [goid 5828] [pmid 12837247] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [pmid 11290329] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [pmid 11290329] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 15928712] [evidence TAS]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [pmid 11290329] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11290329] [evidence IPI]; Catalysis of the reaction: GDP-L-fucose + beta-D-galactosyl-R = GDP + alpha-L-fucosyl-(1,2)-beta-D-galactosyl-R [goid 8107] [pmid 11290329] [evidence NAS]; Interacting selectively with the plus end of a microtubule [goid 51010] [pmid 11290329] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_057089.1	ILMN_4691	AP1S1	NM_057089.2	NM_057089.2		1174	148536832	NM_057089.2	AP1S1	NP_476430.1	ILMN_1712806	0005490673	I	775	CCTTGGCTGCAGTGGGGCCTTTATCCAGTGCCAGGGAGGAACAACATAGT	7	+	100591032-100591081	7q22.1d	Homo sapiens adaptor-related protein complex 1, sigma 1 subunit (AP1S1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15569716] [evidence EXP]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of beta1, gamma1, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network [goid 30121] [pmid 9733768] [evidence TAS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 9733768] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	SIGMA1A; CLAPS1; AP19	SIGMA1A; CLAPS1; AP19
Homo sapiens	RefSeq	NM_001283.2	ILMN_4691	AP1S1	NM_057089.2	NM_057089.2		1174	148536832	NM_057089.2	AP1S1	NP_476430.1	ILMN_1751345	0002190341	A	140	GCAGGGAAAACTGCGGCTGCAAAAATGGTACCTGGCCACTTCGGACAAGG	7	+	100586621-100586670	7q22.1d	Homo sapiens adaptor-related protein complex 1, sigma 1 subunit (AP1S1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15569716] [evidence EXP]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of beta1, gamma1, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network [goid 30121] [pmid 9733768] [evidence TAS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 9733768] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	SIGMA1A; CLAPS1; AP19	SIGMA1A; CLAPS1; AP19
Homo sapiens	RefSeq	XR_039276.1	ILMN_345223	LOC100131223	XR_039276.1	XR_039276.1		100131223	169161535	XR_039276.1	LOC100131223		ILMN_3210986	0004560333	A	147	GATACCCACAGTGGGCTTCAACATGAGGGAAGTAACAAGGTAACGTCACA				1p35.3b	PREDICTED: Homo sapiens misc_RNA (LOC100131223), miscRNA.					
Homo sapiens	RefSeq	XR_039276.1	ILMN_345223	LOC100131223	XR_039276.1	XR_039276.1		100131223	169161535	XR_039276.1	LOC100131223		ILMN_3287483	0003180280	M	458	GATAGAGAAGTTTGCCGCTATTCAATTTCTTTTCCACTGCGCCCAGCCTC				1p35.3b	PREDICTED: Homo sapiens misc_RNA (LOC100131223), miscRNA.					
Homo sapiens	RefSeq	NM_001001668.2	ILMN_8986	ZNF470	NM_001001668.3	NM_001001668.3		388566	154091002	NM_001001668.3	ZNF470	NP_001001668.3	ILMN_1690863	0004920520	S	2776	CGGAGAGTCATCAGTTATTCTCTCCTCTGCCCTCCCATACCACCAAGTCC	19	+	57089897-57089946	19q13.43a	Homo sapiens zinc finger protein 470 (ZNF470), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CZF-1; FLJ26175; FLJ26846	CZF-1; FLJ26175
Homo sapiens	RefSeq	NM_031304.2	ILMN_22212	DOHH	NM_031304.3	NM_031304.3		83475	141802165	NM_031304.3	DOHH	NP_112594.1	ILMN_1784977	0006660279	S	1553	CGTTATGGTGGCTTCAGCTTCACTAGGAATGGGACACAGGGTCTGGGGGC	19	-	3441959-3442008	19p13.3f-p13.3e	Homo sapiens deoxyhypusine hydroxylase/monooxygenase (DOHH), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The posttranslational modification of peptidyl-lysine to form hypusine, N6-(4-amino-2-hydroxybutyl)-L-lysine [goid 8612] [pmid 16371467] [evidence IMP]; The posttranslational modification of peptidyl-lysine to form hypusine, N6-(4-amino-2-hydroxybutyl)-L-lysine [goid 8612] [pmid 16452303] [evidence EXP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17213197] [evidence IPI]; Catalysis of the reaction: protein N6-(4-aminobutyl)-L-lysine + donor-H2 + O2 = protein N6-((R)-4-amino-2-hydroxybutyl)-L-lysine + acceptor + H2O [goid 19135] [pmid 16371467] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HLRC1; MGC4293	HLRC1; MGC4293
Homo sapiens	RefSeq	NM_000701.6	ILMN_677	ATP1A1	NM_000701.6	NM_000701.6		476	48762680	NM_000701.6	ATP1A1	NP_000692.2	ILMN_1731783	0003370164	A	3304	CGAAGTCAGAAAACTCATCATCAGGCGACGCCCTGGCGGCTGGGTGGAGA	1	+	116748083-116748120:116748561-116748572	1p13.1c	Homo sapiens ATPase, Na+/K+ transporting, alpha 1 polypeptide (ATP1A1), transcript variant 1, mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 1975705] [evidence TAS]; Sodium:potassium-exchanging ATPases are tetrameric proteins, consisting of two large alpha subunits and two smaller beta subunits. The alpha subunits bear the active site and penetrate the membrane, while the beta subunits carry oligosaccharide groups and face the cell exterior [goid 5890] [pmid 1975705] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids [goid 31947] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction [goid 45822] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of heart contraction [goid 45823] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of striated muscle contraction [goid 45989] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence ISS]; The regulation of the levels, transport, and metabolism of hydrogen ions (protons) within a cell or between a cell and its external environment [goid 30641] [evidence ISS]	Catalysis of the reaction: 4-nitrophenyl phosphate + H2O = 4-nitrophenol + phosphate [goid 3869] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [pmid 1975705] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15671290] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11027149] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage [goid 15077] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC3285; MGC51750	MGC3285; MGC51750
Homo sapiens	RefSeq	NM_000701.6	ILMN_677	ATP1A1	NM_000701.6	NM_000701.6		476	48762680	NM_000701.6	ATP1A1	NP_000692.2	ILMN_1775566	0005570152	I	2760	CCCTGGCTTATGAGCAGGCTGAGAGTGACATCATGAAGAGACAGCCCAGA	1	+	116743578-116743627	1p13.1c	Homo sapiens ATPase, Na+/K+ transporting, alpha 1 polypeptide (ATP1A1), transcript variant 1, mRNA.	Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 1975705] [evidence TAS]; Sodium:potassium-exchanging ATPases are tetrameric proteins, consisting of two large alpha subunits and two smaller beta subunits. The alpha subunits bear the active site and penetrate the membrane, while the beta subunits carry oligosaccharide groups and face the cell exterior [goid 5890] [pmid 1975705] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids [goid 31947] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction [goid 45822] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of heart contraction [goid 45823] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of striated muscle contraction [goid 45989] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence ISS]; The regulation of the levels, transport, and metabolism of hydrogen ions (protons) within a cell or between a cell and its external environment [goid 30641] [evidence ISS]	Catalysis of the reaction: 4-nitrophenyl phosphate + H2O = 4-nitrophenol + phosphate [goid 3869] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [pmid 1975705] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15671290] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11027149] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage [goid 15077] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC3285; MGC51750	MGC3285; MGC51750
Homo sapiens	RefSeq	XM_001714387.1	ILMN_346724	LOC728636	XM_001714387.1	XM_001714387.1		728636	169208457	XM_001714387.1	LOC728636	XP_001714439.1	ILMN_3251582	0003370307	S	8762	AGAACGTCATTTGCTAGAAGGGATGCTGAGGCTCTGGGAGGGAAAGGGAC	15	+	80909554-80909603	15q25.2a	PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a-like (LOC728636), mRNA.					
Homo sapiens	Unigene	Hs.552207	ILMN_110882	HS.552207	Hs.552207		Hs.552207		13750513	BG462007			ILMN_1818177	0000060424	S	195	GGAAGCTGCGTCATTAGTTCGGGGTCGGGATAAAGGGGAAGGATGAACGC	10	+	3271472-3271521		RST44995 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_014952.2	ILMN_13079	BAHD1	NM_014952.3	NM_014952.3		22893	139394603	NM_014952.3	BAHD1	NP_055767.3	ILMN_1739256	0002650528	S	4073	TGGGAGGATGGGGCAGTAAATGAGGTTGGCAGAGTGGCAGTGGGGGCTCT	15	+	38547280-38547329	15q15.1a	Homo sapiens bromo adjacent homology domain containing 1 (BAHD1), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	KIAA0945	KIAA0945
Homo sapiens	RefSeq	NR_024130.1	ILMN_363712	NCRNA00093	NR_024130.1	NR_024130.1		100188954	201025395	NR_024130.1	NCRNA00093		ILMN_3235335	0000380671	S	2027	TACTGCTGAGGAGAAGCACGAGTAACTGAGTTTTATGCCTGAACCGTCTG	10	+	101718131-101718180		Homo sapiens non-protein coding RNA 93 (NCRNA00093), non-coding RNA.					
Homo sapiens	RefSeq	NM_001013644.1	ILMN_171194	LOC644634	XM_001133559.1	XM_001133559.1		644634	113411436	XM_001133559.1	LOC644634	XP_001133559.1	ILMN_1763882	0007050358	I	3461	GGAGAAGCTTGGAGTGCAGGATTTGGTGGTATGTGTGTGGCAGTAGGCAC	1	+	147943272-147943321	1q21.1e	PREDICTED: Homo sapiens hypothetical LOC644634, transcript variant 1 (LOC644634), mRNA.					
Homo sapiens	RefSeq	XM_942171.1	ILMN_171194	LOC644634	XM_001133559.1	XM_001133559.1		644634	113411436	XM_001133559.1	LOC644634	XP_001133559.1	ILMN_1776524	0004010050	A	2949	ACAGCATGCCCTGTGGCCTGTATCCTGCTGGTGTGGAACAGTCAGACCCC	1	+	147942760-147942809	1q21.1e	PREDICTED: Homo sapiens hypothetical LOC644634, transcript variant 1 (LOC644634), mRNA.					
Homo sapiens	RefSeq	NM_145754.2	ILMN_17962	KIFC2	NM_145754.2	NM_145754.2		90990	34147722	NM_145754.2	KIFC2	NP_665697.1	ILMN_1803018	0004210561	S	3054	GTGACGGCTGGTGACTGATGGATGGGTAGTGGGCTGAGAAGAGGGGACTA	8	+	145670113-145670162	8q24.3h	Homo sapiens kinesin family member C2 (KIFC2), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	Unigene	Hs.570028	ILMN_122209	HS.570028	Hs.570028		Hs.570028		83152492	DB305184			ILMN_1895917	0001710400	S	271	CCTCAAATGGGGCCAGGGGATTGACTTCCAAGAGGGCTCACCCACATAGC	19	-	56539234-56539283		DB305184 BRAWH3 Homo sapiens cDNA clone BRAWH3018751 3, mRNA sequence					
Homo sapiens	Unigene	Hs.560357	ILMN_114192	HS.560357	Hs.560357		Hs.560357		4453627	AI539492			ILMN_1857081	0005820180	S	213	GTCAACAGGCCGGGCACGGTGGCTCAGTTATTTCATCCTCAGCTGGGCTT					te46f04.x1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:2089759 3, mRNA sequence					
Homo sapiens	RefSeq	NM_030571.2	ILMN_17345	NDFIP1	NM_030571.2	NM_030571.2		80762	33519472	NM_030571.2	NDFIP1	NP_085048.1	ILMN_1751452	0000060553	S	2273	TTCTCAGTTGAATGCACCAACTGGTTTGAGTCCTGTGAGCATTCAGTCAG	5	+	141512868-141512917	5q31.3d	Homo sapiens Nedd4 family interacting protein 1 (NDFIP1), mRNA.				N4WBP5; MGC10924	N4WBP5; MGC10924
Homo sapiens	RefSeq	XM_940677.1	ILMN_32863	LOC651515	XM_940677.1	XM_940677.1		651515	89057494	XM_940677.1	LOC651515	XP_945770.1	ILMN_1791113	0006900609	S	183	GCATGCTGCTATGAATCCCAAGTTGCTACAAGGGCAAAGACAGCAACAGA					PREDICTED: Homo sapiens hypothetical protein LOC651515 (LOC651515), mRNA.					
Homo sapiens	RefSeq	NM_003429.1	ILMN_22203	ZNF85	NM_003429.2	NM_003429.2		7639	142345520	NM_003429.2	ZNF85	NP_003420.1	ILMN_1747824	0001580280	S	2216	ATGTGGAAAAGCCGTTAATATCTGCTCACATCTTACTCAGCATCAGAAAG	19	+	20925263-20925312	19p12d	Homo sapiens zinc finger protein 85 (ZNF85), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9839802] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9839802] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9839802] [evidence TAS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HTF1; MGC78566; HPF4	HTF1; MGC78566; HPF4
Homo sapiens	RefSeq	NM_012338.3	ILMN_20999	TSPAN12	NM_012338.3	NM_012338.3		23554	48255911	NM_012338.3	TSPAN12	NP_036470.1	ILMN_1768115	0002370671	S	1172	CAACTCTCAGCACCTGTCATGTCCCTCAGTAGAACTGTTGAAACCAAGCC	7	-	120428716-120428765	7q31.31d	Homo sapiens tetraspanin 12 (TSPAN12), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10719184] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10719184] [evidence TAS]			TM4SF12; NET-2	TM4SF12; NET-2
Homo sapiens	RefSeq	NM_182571.2	ILMN_28182	FLJ35258	NM_182571.2	NM_182571.2		284297	60678247	NM_182571.2	FLJ35258	NP_872377.2	ILMN_1763891	0000840040	S	272	TGCCTGCACCAACCACCACTACCCCAGAGGAAGAAGAAAGACCCCTGAGG	19	+	60722116-60722165	19q13.42c	Homo sapiens hypothetical protein 284297 (FLJ35258), mRNA.					
Homo sapiens	RefSeq	NM_000317.1	ILMN_22962	PTS	NM_000317.1	NM_000317.1		5805	4506330	NM_000317.1	PTS	NP_000308.1	ILMN_1720322	0006280341	S	106	AAGTGTCCCGCCGCATCTCCTTCAGCGCGAGCCACCGATTGTACAGTAAA	11	+	111602414-111602459:111604527-111604530	11q23.1c	Homo sapiens 6-pyruvoyltetrahydropterin synthase (PTS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 3308682] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 3308682] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 3308682] [evidence TAS]	Catalysis of the reaction: 6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydropterin = 6-pyruvoyl-5,6,7,8-tetrahydropterin + triphosphate [goid 3874] [pmid 3308682] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16169070] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PTPS	PTPS
Homo sapiens	RefSeq	NM_000317.1	ILMN_22962	PTS	NM_000317.1	NM_000317.1		5805	4506330	NM_000317.1	PTS	NP_000308.1	ILMN_2162328	0004050437	S	581	AAGAGGTCAACACGTGATTGTTGTACGTACACATTGTGCTCTGGAGTGCC	11	+	111609563-111609612	11q23.1c	Homo sapiens 6-pyruvoyltetrahydropterin synthase (PTS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 3308682] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 3308682] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 3308682] [evidence TAS]	Catalysis of the reaction: 6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydropterin = 6-pyruvoyl-5,6,7,8-tetrahydropterin + triphosphate [goid 3874] [pmid 3308682] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16169070] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PTPS	PTPS
Homo sapiens	RefSeq	NM_001887.3	ILMN_28617	CRYBB1	NM_001887.3	NM_001887.3		1414	21536279	NM_001887.3	CRYBB1	NP_001878.1	ILMN_1715879	0003310653	S	826	GTGAGTCCACACCTCACTCTGCTACCTTGCCCCAACCCTTCTTCATGTTC	22	-	26995407-26995453:26995454-26995456	22q12.1a	Homo sapiens crystallin, beta B1 (CRYBB1), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 8626774] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	CATCN3	CATCN3
Homo sapiens	RefSeq	NM_003149.1	ILMN_5832	STAC	NM_003149.1	NM_003149.1		6769	4507246	NM_003149.1	STAC	NP_003140.1	ILMN_1774127	0006520435	S	2700	GTTGGGAACTGAGAGGGGATGGCTGCTGGTTTCACAGAAGTTTGGATGCC	3	+	36563278-36563327	3p22.3a-p22.2b	Homo sapiens SH3 and cysteine rich domain (STAC), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8954993] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ32331; STAC1	FLJ32331; STAC1
Homo sapiens	RefSeq	XM_937492.1	ILMN_22792	SSX9	NM_174962.3	NM_174962.3		280660	148806885	NM_174962.3	SSX9	NP_777622.1	ILMN_1742097	0006620189	A	462	AGTGCCAGAAGCATCTGGCTTACAGAACGATGGGAAACAGCTGTGCCCCC	X	-	48159108-48159157	Xp11.23e	Homo sapiens synovial sarcoma, X breakpoint 9 (SSX9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	NM_000214.1	ILMN_21187	JAG1	NM_000214.1	NM_000214.1		182	4557678	NM_000214.1	JAG1	NP_000205.1	ILMN_1691376	0005720735	S	5648	CTGCCACCCTGCTGAGTCTGTTCTGGTAATCGGGGTATAATAGGCTCTGC	20	-	10566517-10566566	20p12.2a	Homo sapiens jagged 1 (Alagille syndrome) (JAG1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11427524] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11427524] [evidence NAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 8955070] [evidence NAS]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [pmid 9207788] [evidence NAS]; The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8923452] [evidence NAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 10329626] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [pmid 12107827] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [pmid 11549580] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 10329626] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of an auditory hair cell [goid 42491] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [pmid 10329626] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 45446] [pmid 10329626] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of myeloid cell differentiation [goid 45639] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the Notch signaling pathway [goid 45747] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]	Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [pmid 9268641] [evidence NAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 10679295] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 11067884] [evidence NAS]	CD339; AWS; HJ1; JAGL1; MGC104644; AGS; AHD	CD339; AWS; HJ1; JAGL1; MGC104644; AGS; AHD
Homo sapiens	RefSeq	XM_001715780.1	ILMN_336541	FAM132B	XM_001715780.1	XM_001715780.1		151176	169164561	XM_001715780.1	FAM132B	XP_001715832.1	ILMN_3178410	0001170259	A	1463	TCACCATCTCTGTGAATGGCGTCCTGTACCTGCAGATGGGGCAGTGGACC				2q37.3c	PREDICTED: Homo sapiens family with sequence similarity 132, member B (FAM132B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	RefSeq	NM_002393.1	ILMN_38635	MDM4	NM_002393.2	NM_002393.2		4194	88702790	NM_002393.2	MDM4	NP_002384.2	ILMN_1746020	0005420471	S	2032	CTTCTGCCCCTCTTCAGACAGTCCTTCAGCTATTTCATGGCTCTCACCCT	1	+	202785830-202785879	1q32.1f	Homo sapiens Mdm4 p53 binding protein homolog (mouse) (MDM4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9226370] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9226370] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10608892] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 14660608] [evidence IEP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9226370] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [pmid 10608892] [evidence IMP]; The transition from the G0 quiescent state to the G1 phase. Under certain conditions, cells exit the cell cycle during G1 and remain in the G0 state as nongrowing, non-dividing (quiescent) cells. Appropriate stimulation of such cells induces them to return to G1 and resume growth and division. The G0 to G1 transition is accompanied by many changes in the program of gene expression [goid 45023] [pmid 12101245] [evidence IEP]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 10608892] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10608892] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10469568] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10608892] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10608892] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MDMX; DKFZp781B1423; MRP1; MGC132766	MDMX; DKFZp781B1423; MRP1
Homo sapiens	RefSeq	NM_018472.1	ILMN_164958	FAM45B	NM_018472.2	NM_018472.2		55855	118150634	NM_018472.2	FAM45B	NP_060942.2	ILMN_1797116	0001340719	S	107	GTGCCAAAGTTGAGAGACCCTGGGGTAGAGACGTGTGATGGGAAGGAAAG	X	+	129456726-129456775	Xq25h	Homo sapiens family with sequence similarity 45, member B (FAM45B), mRNA.				HT011	HT011
Homo sapiens	RefSeq	XM_373690.3	ILMN_40707	LOC388282	XM_373690.4	XM_373690.4		388282	113426117	XM_373690.4	LOC388282	XP_373690.3	ILMN_1741188	0005360022	S	145	TGTGCAAACCTCCCACCTGGCATCCTGCGTGTGTCCAGCACCTCCCTGCA	16	+	56402194-56402197:56405075-56405120	16q13d	PREDICTED: Homo sapiens hypothetical gene supported by AF452719; BC041062 (LOC388282), mRNA.					
Homo sapiens	RefSeq	NM_022094.2	ILMN_174646	CIDEC	NM_022094.2	NM_022094.2		63924	23943903	NM_022094.2	CIDEC	NP_071377.2	ILMN_2174437	0000780309	S	1193	CCCCCATCCCGGAACATTCCTGAGTGAATTCGCAAGCGCACTAGCATGTG	3	-	9908432-9908481	3p25.3c	Homo sapiens cell death-inducing DFFA-like effector c (CIDEC), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12429024] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12429024] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ20871; CIDE-3; Fsp27	FLJ20871; CIDE-3; Fsp27
Homo sapiens	RefSeq	NM_001009941.1	ILMN_3845	ANKRD16	NM_001009941.1	NM_001009941.1		54522	58331112	NM_001009941.1	ANKRD16	NP_001009941.1	ILMN_2353431	0003450274	A	960	CTGCATCTGGCCTGTGCAGGTCAGCACTTGGCCTGTGCCAAGTTTCTCCT	10	-	5960204-5960253	10p15.1b	Homo sapiens ankyrin repeat domain 16 (ANKRD16), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_016623.3	ILMN_14248	FAM49B	NM_016623.3	NM_016623.3		51571	42734437	NM_016623.3	FAM49B	NP_057707.3	ILMN_2122374	0002630703	S	1860	CTCCTGCATGGCAAAACTGCCTATTCTGCTATTTAAAAACCCTCAATGAC	8	-	130923331-130923380	8q24.21c	Homo sapiens family with sequence similarity 49, member B (FAM49B), mRNA.				L1; DKFZp686B04128; BM-009	L1; DKFZp686B04128; BM-009
Homo sapiens	RefSeq	NM_016623.3	ILMN_14248	FAM49B	NM_016623.3	NM_016623.3		51571	42734437	NM_016623.3	FAM49B	NP_057707.3	ILMN_1809400	0007160079	S	1539	GCACCTGCTGTAGACAGAAGACAGTATTCTGCAATGACTGAGAATGCAGT	8	-	130928250-130928299	8q24.21c	Homo sapiens family with sequence similarity 49, member B (FAM49B), mRNA.				L1; DKFZp686B04128; BM-009	L1; DKFZp686B04128; BM-009
Homo sapiens	RefSeq	NM_003802.1	ILMN_21618	MYH13	NM_003802.2	NM_003802.2		8735	110624780	NM_003802.2	MYH13	NP_003793.2	ILMN_1767090	0005360750	S	5910	CTCACCTGATGCTCGTTGCCATGGGACACCTCCGAGAGAGTGGAGGGAAA	17	-	10206604-10206608:10206711-10206755	17p13.1a	Homo sapiens myosin, heavy chain 13, skeletal muscle (MYH13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [pmid 10388558] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]	MyHC-eo	MyHC-eo
Homo sapiens	RefSeq	NR_030396.1	ILMN_388251	MIR659	NR_030396.1	NR_030396.1		724029	262206319	NR_030396.1	MIR659		ILMN_3309749	0005490747	S	11	GATTTGGTTCAGGACCTTCCCTGAACCAAGGAAGAGTCACAGTCTCTTCC				22q13.1a	Homo sapiens microRNA 659 (MIR659), microRNA.					
Homo sapiens	RefSeq	NM_006793.2	ILMN_28385	PRDX3	NM_006793.2	NM_006793.2		10935	32483378	NM_006793.2	PRDX3	NP_006784.1	ILMN_2395974	0005820020	A	550	CCGAGACTACGGTGTGCTGTTAGAAGGTTCTGGTCTTGCACTAAGAGGTC	10	-	120928849-120928854:120931894-120931937	10q26.11c	Homo sapiens peroxiredoxin 3 (PRDX3), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18205602] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 17893648] [evidence IDA]; A protein serine/threonine kinase that phosphorylates IkappaB, thereby targeting this for proteasomal degradation and allowing the nuclear translocation of kB. Composed of alpha, beta and gamma subunits, the latter not having kinase activity but presumed to play a regulatory role [goid 8385] [pmid 12492477] [evidence IPI]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 18195003] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 33673] [pmid 18205602] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [pmid 18195003] [evidence IMP]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 12492477] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: octane hydroperoxide + NADH + H+ = H2O + NAD+ + 1-octanol [goid 8785] [pmid 7733872] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 12492477] [evidence IPI]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	MGC104387; MER5; AOP-1; MGC24293; AOP1; PRO1748; SP-22	MGC104387; MER5; AOP-1; MGC24293; SP-22; AOP1; PRO1748
Homo sapiens	RefSeq	NM_006793.2	ILMN_28385	PRDX3	NM_006793.2	NM_006793.2		10935	32483378	NM_006793.2	PRDX3	NP_006784.1	ILMN_2395969	0005570292	A	741	GGACACCGGATTCTCCTACGATCAAGCCAAGTCCAGCTGCTTCCAAAGAG	10	-	120928305-120928335:120928689-120928707	10q26.11c	Homo sapiens peroxiredoxin 3 (PRDX3), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18205602] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 17893648] [evidence IDA]; A protein serine/threonine kinase that phosphorylates IkappaB, thereby targeting this for proteasomal degradation and allowing the nuclear translocation of kB. Composed of alpha, beta and gamma subunits, the latter not having kinase activity but presumed to play a regulatory role [goid 8385] [pmid 12492477] [evidence IPI]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 18195003] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate or extent of kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 33673] [pmid 18205602] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [pmid 18195003] [evidence IMP]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 12492477] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: octane hydroperoxide + NADH + H+ = H2O + NAD+ + 1-octanol [goid 8785] [pmid 7733872] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 12492477] [evidence IPI]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	MGC104387; MER5; AOP-1; MGC24293; AOP1; PRO1748; SP-22	MGC104387; MER5; AOP-1; MGC24293; SP-22; AOP1; PRO1748
Homo sapiens	Unigene	Hs.558282	ILMN_113160	HS.558282	Hs.558282		Hs.558282		18517060	BM468018			ILMN_1816599	0002360735	S	316	ACAGTGCAGACAGCAGAAGGGGTAGGCCAGGAGGCAGAGTAGGCACACCT	8	-	38136109-38136158		AGENCOURT_6437618 NIH_MGC_71 Homo sapiens cDNA clone IMAGE:5532913 5, mRNA sequence					
Homo sapiens	RefSeq	NM_020731.2	ILMN_6799	AHRR	NM_020731.3	NM_020731.3		57491	115430244	NM_020731.3	AHRR	NP_065782.2	ILMN_1782679	0005560433	S	2119	AGGGAATGGTGCCCGGGATGTTGCCCAAAAGTGCCTTGGCCACGCTGGTC	5	+	434457-434506	5p15.33e	Homo sapiens aryl-hydrocarbon receptor repressor (AHRR), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC167813; KIAA1234; AHHR; MGC176630; AHH	KIAA1234; AHHR; AHH
Homo sapiens	RefSeq	NR_003579.1	ILMN_307145	FRG1B	NR_003579.1	NR_003579.1		284802	149274657	NR_003579.1	FRG1B		ILMN_3236543	0004760291	S	424	CTGAAATCTGGCTATGGAAAATATCTTGGTATAAATTCAGATGAACTTGT	20	+	28239541-28239590	20q11.1c	Homo sapiens FSHD region gene 1 family, member B (FRG1B), non-coding RNA.				C20orf80; bA348I14.2; MGC72104	C20orf80; bA348I14.2; MGC72104
Homo sapiens	RefSeq	NM_015482.1	ILMN_356887	SLC22A23	NM_015482.1	NM_015482.1		63027	170650642	NM_015482.1	SLC22A23	NP_056297.1	ILMN_3227263	0007550450	A	5772	ACTACTTTGAACGCCTCTGTAAGCTGTGTCTTCACTCGCCCCGAGGTGGG	6	-	3269528-3269577	6p25.2a	Homo sapiens solute carrier family 22, member 23 (SLC22A23), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Homo sapiens	RefSeq	NM_024929.1	ILMN_166906	C6ORF59	XR_017956.1	XR_017956.1		79992	113418141	XR_017956.1	C6orf59		ILMN_1655572	0000110048	S	1427	AGTTGGCTGGAGGAGGCCAGTCAGGAGTGCAAGAACCCCGCGTACTCTGT				6q26a	PREDICTED: Homo sapiens chromosome 6 open reading frame 59 (C6orf59), misc RNA.					FLJ23112; RIPPLY2
Homo sapiens	RefSeq	XR_038623.1	ILMN_345847	LOC100132488	XR_038623.1	XR_038623.1		100132488	169162132	XR_038623.1	LOC100132488		ILMN_3288161	0003460537	M	89	GAAGAAACGCCTGGTGCAGAGCCCCAATTCCTACTTCATGGGTGTGAAAT				1p13.3b	PREDICTED: Homo sapiens misc_RNA (LOC100132488), miscRNA.					
Homo sapiens	RefSeq	NM_080431.4	ILMN_15171	ACTRT2	NM_080431.4	NM_080431.4		140625	83267870	NM_080431.4	ACTRT2	NP_536356.3	ILMN_3241416	0007100201	S	1266	TCAAGCAGATGTGGGTCACCGCCGCAGACTTCAAGGAGTTTGGGACCTCC	1	+	2929171-2929220	1p36.32c	Homo sapiens actin-related protein T2 (ACTRT2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARPM2; ARPT2; Arp-T2; FLJ25424; HARPM2	ARPM2; ARPT2; Arp-T2; FLJ25424; HARPM2
Homo sapiens	RefSeq	XM_929222.1	ILMN_42264	LOC646279	XM_929222.1	XM_929222.1		646279	89037406	XM_929222.1	LOC646279	XP_934315.1	ILMN_1777161	0003870369	S	131	CTTCTCTCTCCACTTCGCCATGCTTCCACTTTCCCCATCACCCAGTCCCC	14	-	64804300-64804349	14q23.3a	PREDICTED: Homo sapiens similar to ribosomal protein L21 isoform 1 (LOC646279), mRNA.					
Homo sapiens	Unigene	Hs.570364	ILMN_122545	HS.570364	Hs.570364		Hs.570364		82378415	DB030984			ILMN_1912121	0001400390	S	402	GGCCTAGTCACCTCCATTGTCCAAGCCAATAGGTACCCAGCCATCACACC	20	+	10920430-10920479		DB030984 TESTI2 Homo sapiens cDNA clone TESTI2014797 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001080523.1	ILMN_183211	ARRDC5	NM_001080523.1	NM_001080523.1		645432	122937477	NM_001080523.1	ARRDC5	NP_001073992.1	ILMN_2153787	0002370270	S	990	GGACGGAGTGTTACCCGTGAACCCAGATCACCAGAATTAAGTGCCCGAAC	19	-	4891047-4891057:4891058-4891096	19p13.3c	Homo sapiens arrestin domain containing 5 (ARRDC5), mRNA.					
Homo sapiens	RefSeq	XM_938401.1	ILMN_36167	LOC648304	XM_938401.1	XM_938401.1		648304	88970762	XM_938401.1	LOC648304	XP_943494.1	ILMN_1741518	0002060056	S	923	CGTCCACCAGCCAATGCTTTATTGGAAGTCAACGAATGAGACCGAGGGTG					PREDICTED: Homo sapiens hypothetical protein LOC648304 (LOC648304), mRNA.					
Homo sapiens	RefSeq	XM_929357.1	ILMN_45207	LOC646429	XM_929357.1	XM_929357.1		646429	89030903	XM_929357.1	LOC646429	XP_934450.1	ILMN_1784685	0000010402	S	229	GGAGGGAAGCCAGAGATCACCTCCAATACCCCTTTTGCTCTTACGTGGGC	10	+	38640653-38640702		PREDICTED: Homo sapiens similar to phospholipase D family, member 5 (LOC646429), mRNA.					
Homo sapiens	RefSeq	NM_182557.1	ILMN_27555	BCL9L	NM_182557.2	NM_182557.2		283149	112420980	NM_182557.2	BCL9L	NP_872363.1	ILMN_1743966	0005960471	S	7416	CCCCCAAACTGTCTGACTCTGTGTTTCCTGCCCTGAGGAGAGAGGGGTCA	11	-	118767123-118767172	11q23.3e	Homo sapiens B-cell CLL/lymphoma 9-like (BCL9L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		DLNB11; BCL9-2	DLNB11; BCL9-2
Homo sapiens	RefSeq	XM_001718725.1	ILMN_335165	LOC100133729	XM_001718725.1	XM_001718725.1		100133729	169218278	XM_001718725.1	LOC100133729	XP_001718777.1	ILMN_3235875	0003990327	S	216	ACTGGTTATCTTAGGATCATGGAAAACCTGGAATCAAGGCTCAAGAATGC					PREDICTED: Homo sapiens similar to hCG2044778 (LOC100133729), mRNA.					
Homo sapiens	RefSeq	NM_000841.1	ILMN_11058	GRM4	NM_000841.1	NM_000841.1		2914	4504140	NM_000841.1	GRM4	NP_000832.1	ILMN_1752843	0006840255	S	3603	TCGAGTGTGTTGCCAAGTGCTGCGTCCTCCTGGTGGCCTCTGTGTGTGTC	6	-	34098521-34098570	6p21.31f-p21.31e	Homo sapiens glutamate receptor, metabotropic 4 (GRM4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 15102938] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15102938] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [pmid 15102938] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 15102938] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 15102938] [evidence IEP]; The series of molecular signals generated as a consequence of a metabotropic glutamate receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7196] [pmid 15102938] [evidence IMP]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8738157] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [pmid 15102938] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [pmid 15102938] [evidence IEP]; Any process that modulates the occurrence or rate of cell death by apoptosis in the nervous system. It may stop or prevent or reduce the rate of cell death by apoptosis and it is activated by stress to counteract death signals in central nervous systems. Different neuroprotective mechanisms may be activated to combat distinct types of cellular stress, ERK pathway is one of several neuroprotective mechanisms and it is a model system to study neuronal apoptosis, which may contribute to several neurodegenerative diseases and aging-related neuron loss [goid 43526] [pmid 15102938] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	mGlu4; MGLUR4; GPRC1D	mGlu4; MGLUR4; GPRC1D
Homo sapiens	RefSeq	NM_173677.1	ILMN_167276	FLJ40852	NM_173677.1	NM_173677.1		285962	27734968	NM_173677.1	FLJ40852	NP_775948.1	ILMN_1745860	0003130619	S	1948	AGGGGTCTCCAGTGCTCCTGACTCCTCACAGCTCTGTTCCTATGACAAGG	7	-	141050871-141050920	7q34e	Homo sapiens hypothetical protein FLJ40852 (FLJ40852), mRNA.					
Homo sapiens	RefSeq	XM_934731.1	ILMN_46404	LOC644122	XM_934731.1	XM_934731.1		644122	89040142	XM_934731.1	LOC644122	XP_939824.1	ILMN_1665960	0006520091	I	465	TGAGGGCTTGGGTTCCGCCCCTCGCTCCGAGCCGCCCTGATGCCCCTGTA	16	+	30113646-30113685:30113686-30113695		PREDICTED: Homo sapiens similar to GIY-YIG domain containing 2 isoform 1, transcript variant 2 (LOC644122), mRNA.					
Homo sapiens	RefSeq	XM_001718622.1	ILMN_340099	LOC100131294	XM_001718622.1	XM_001718622.1		100131294	169204173	XM_001718622.1	LOC100131294	XP_001718674.1	ILMN_3205353	0004670598	A	686	GCATCATGGAGAATGCCTCAGCTGGGGTGGAGCACCTCTTGCTAGGGAAC	12	-	54660721-54660770	12q13.2c	PREDICTED: Homo sapiens similar to RAB13 protein (LOC100131294), mRNA.					
Homo sapiens	RefSeq	NM_002723.3	ILMN_7576	PRB4	NM_002723.3	NM_002723.3		5545	41349489	NM_002723.3	PRB4	NP_002714.2	ILMN_1755704	0006560270	S	737	AGGCCACCCAGACCTGCCCAGGGACAACAGCCTCCCCAGTAATCTAGGAT	12	-	11461164-11461172:11461173-11461213	12p13.2b	Homo sapiens proline-rich protein BstNI subfamily 4 (PRB4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8373986] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	Po	Po
Homo sapiens	RefSeq	NM_030946.1	ILMN_13198	OR14J1	NM_030946.1	NM_030946.1		442191	53850573	NM_030946.1	OR14J1	NP_112208.1	ILMN_1713602	0001400048	S	693	CCGGACCAAGGTCTTCTCCACCTGCCTACCACACCTATTTGTAGCCACCT	6	+	29275159-29275208	6p22.1a	Homo sapiens olfactory receptor, family 14, subfamily J, member 1 (OR14J1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	bA150A6.4; hs6M1-28; OR6-25	bA150A6.4; hs6M1-28; OR6-25
Homo sapiens	RefSeq	NM_199053.1	ILMN_8562	C4ORF41	NM_199053.1	NM_199053.1		60684	39995077	NM_199053.1	C4orf41	NP_951008.1	ILMN_2338921	0004050474	A	4155	TCCTAGACTGAAAGTTTTTGGAAAAGATGCAGGGTCTGAGTCAGGCCTTC	4	+	184634493-184634542	4q35.1c	Homo sapiens chromosome 4 open reading frame 41 (C4orf41), transcript variant 2, mRNA.				FLJ12716	FLJ12716
Homo sapiens	RefSeq	NM_012451.2	ILMN_20845	SYNGR4	NM_012451.2	NM_012451.2		23546	22035701	NM_012451.2	SYNGR4	NP_036583.2	ILMN_1726924	0006250020	S	899	CTGTCTGACCGCTCCAAAGTCCCCCCGGCTTGCTATGATGCCTGACAACT	19	+	48879524-48879573	19q13.32c	Homo sapiens synaptogyrin 4 (SYNGR4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC125805	MGC125805
Homo sapiens	RefSeq	NM_031203.2	ILMN_17229	HNRNPM	NM_031203.2	NM_031203.2		4670	157412269	NM_031203.2	HNRNPM	NP_112480.2	ILMN_3192791	0002360669	A	1824	CGTGCCATCGAGATGGAGCGTGGCAACTTCGGAGGAAGCTTCGCAGGTTC	19	+	8457173-8457222	19p13.2d	Homo sapiens heterogeneous nuclear ribonucleoprotein M (HNRNPM), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9731529] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8088785] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 9731529] [evidence IC ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9731529] [evidence NAS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]	HNRPM4; HTGR1; HNRNPM4; HNRNPM; DKFZp547H118; NAGR1	HNRPM4; HTGR1; HNRNPM4; HNRNPM; DKFZp547H118; NAGR1
Homo sapiens	RefSeq	XM_944628.1	ILMN_38005	LOC651381	XM_944628.1	XM_944628.1		651381	89059353	XM_944628.1	LOC651381	XP_949721.1	ILMN_1660299	0002680048	S	1	ATGACTCTGAGGCTCTCGGATTGGCTGGGAAGCCTCTCTCTGGCTGAGCG					PREDICTED: Homo sapiens hypothetical protein LOC651381 (LOC651381), mRNA.					
Homo sapiens	RefSeq	NM_005781.4	ILMN_5336	TNK2	NM_005781.4	NM_005781.4		10188	58331192	NM_005781.4	TNK2	NP_005772.3	ILMN_1747358	0007000196	I	215	CTGTCCAGGAAACCTACCTGAACGGGAAGGAGCCCCAGGAGGGAGAGGGA	3	-	197120013-197120062	3q29f	Homo sapiens tyrosine kinase, non-receptor, 2 (TNK2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 8497321] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [pmid 10587647] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 8497321] [evidence TAS]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [pmid 8497321] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10360579] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p21cdc42Hs; FLJ44758; ACK; ACK1; FLJ45547	p21cdc42Hs; FLJ44758; ACK; ACK1; FLJ45547
Homo sapiens	RefSeq	NM_005781.4	ILMN_5336	TNK2	NM_005781.4	NM_005781.4		10188	58331192	NM_005781.4	TNK2	NP_005772.3	ILMN_1669703	0001850482	A	4337	GAGGGACATCAGTGCTTCCTCTTCCACCCAATTCCCCCACGCGGTTCCAT	3	-	197074722-197074771	3q29f	Homo sapiens tyrosine kinase, non-receptor, 2 (TNK2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 8497321] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [pmid 10587647] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 8497321] [evidence TAS]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [pmid 8497321] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10360579] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p21cdc42Hs; FLJ44758; ACK; ACK1; FLJ45547	p21cdc42Hs; FLJ44758; ACK; ACK1; FLJ45547
Homo sapiens	RefSeq	NM_007167.2	ILMN_1275	ZMYM6	NM_007167.2	NM_007167.2		9204	68509917	NM_007167.2	ZMYM6	NP_009098.2	ILMN_1657632	0007550722	S	2770	ATCCAGGGTCAGCCAGTGTTGAAAGAGACATTTTGTCTACCTGGCACTGC	1	-	35219996-35220045	1p34.3f-p34.3e	Homo sapiens zinc finger, MYM-type 6 (ZMYM6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10486218] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10486218] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF198L4; ZNF258; MYM	ZNF198L4; ZNF258; MYM
Homo sapiens	RefSeq	NM_181747.1	ILMN_6326	ORC5L	NM_181747.1	NM_181747.1		5001	32454753	NM_181747.1	ORC5L	NP_859531.1	ILMN_1686987	0006330253	I	1113	AGCTATAATGCTATTTTGATTAATGATTTTTCTTTAACTGAAGCTCTAAT	7	-	103808746-103808795	7q22.1g-q22.1h	Homo sapiens origin recognition complex, subunit 5-like (yeast) (ORC5L), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9765232] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15684404] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11125146] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9765232] [evidence NAS]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [pmid 9765232] [evidence NAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [pmid 9765232] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9765232] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 9765232] [evidence TAS]; Interacting selectively with the DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally [goid 3688] [pmid 9765232] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15232106] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ORC5T; ORC5; ORC5P	ORC5T; ORC5; ORC5P
Homo sapiens	RefSeq	NM_021219.2	ILMN_12795	JAM2	NM_021219.2	NM_021219.2		58494	21704284	NM_021219.2	JAM2	NP_067042.1	ILMN_1672350	0000840278	S	1269	GCAGCCGTAGTAGTTGTGGCCTTAGTGATTTCCGTTTGTGGCCTTGGTGT	21	+	26000188-26000237	21q21.3a	Homo sapiens junctional adhesion molecule 2 (JAM2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17525755] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10779521] [evidence NAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 10779521] [evidence NAS]		VE-JAM; PRO245; JAMB; VEJAM; JAM-B; CD322; C21orf43	VE-JAM; PRO245; JAMB; VEJAM; JAM-B; CD322; C21orf43
Homo sapiens	RefSeq	XM_001722520.1	ILMN_347212	ZNF840	XM_001722520.1	XM_001722520.1		100130863	169214830	XM_001722520.1	ZNF840	XP_001722572.1	ILMN_3190632	0005870114	A	2377	GAGGCCCTTTGCATGTAATGAATGTGGAAAGACCTATCGCCTTAACTGGG				20q13.12c	PREDICTED: Homo sapiens zinc finger protein 840 (ZNF840), mRNA.					
Homo sapiens	RefSeq	NM_207306.1	ILMN_27282	KIAA0495	NM_207306.1	NM_207306.1		57212	46409257	NM_207306.1	KIAA0495	NP_997189.1	ILMN_2090040	0003450056	S	3799	CTTTTGGAAACGGGCTTTCTCCTTTCCATTTTGCAGCCGGGGGCGGGTGG	1	-	3643757-3643806	1p36.32b	Homo sapiens KIAA0495 (KIAA0495), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC138189	MGC138189
Homo sapiens	RefSeq	NM_138463.2	ILMN_16042	TLCD1	NM_138463.2	NM_138463.2		116238	34147548	NM_138463.2	TLCD1	NP_612472.1	ILMN_1784655	0001430681	S	769	ATCTACTTTTCCCGCCTCCTCCGCTCTGACTTCTGCCCTGAGCATGTCCC	17	-	24075691-24075740	17q11.2a	Homo sapiens TLC domain containing 1 (TLCD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_943307.1	ILMN_137488	ATP5I	XM_943307.1	XM_943307.1		521	88978874	XM_943307.1	ATP5I	XP_948400.1	ILMN_1703415	0002060343	I	34	CGTGACCCCGATAGTGGAATCAGCTCACCCAAAGCTCAGGCTTCTGAGGC				4p16.3d	PREDICTED: Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e (ATP5I), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 12110673] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12110673] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]		
Homo sapiens	RefSeq	XR_016426.2	ILMN_176894	LOC118945	XR_016426.2	XR_016426.2		118945	169188339	XR_016426.2	LOC118945		ILMN_3245250	0002060368	S	838	ACTGGTTTTGTGGACATCCCTTCACGGGAGAAGGACCTGGCGAAGGCAGT	10	-	89137813-89137862	10q23.2b	PREDICTED: Homo sapiens misc_RNA (LOC118945), miscRNA.					
Homo sapiens	RefSeq	NR_015389.1	ILMN_370168	LOC339290	NR_015389.1	NR_015389.1		339290	213972557	NR_015389.1	LOC339290		ILMN_3236970	0003450615	S	3798	CCAAGCCTAAGGTGAAAGGGCGGGCAGAACCTGTGGTGTTAGGAGGCAAC	18	+	5246326-5246375	18p11.31c	Homo sapiens hypothetical LOC339290 (LOC339290), non-coding RNA.					
Homo sapiens	RefSeq	NM_002901.1	ILMN_8159	RCN1	NM_002901.1	NM_002901.1		5954	4506454	NM_002901.1	RCN1	NP_002892.1	ILMN_1698551	0007560228	S	1790	CTACCTTAAAATGCCAATGAGGTAGGCCTGATCTTTGAATAGTGGCTAGG	11	+	32083336-32083385	11p13e	Homo sapiens reticulocalbin 1, EF-hand calcium binding domain (RCN1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 8416973] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8416973] [evidence TAS]	FLJ37041; PIG20; RCN; RCAL	FLJ37041; PIG20; RCN; RCAL
Homo sapiens	RefSeq	NM_002901.1	ILMN_8159	RCN1	NM_002901.1	NM_002901.1		5954	4506454	NM_002901.1	RCN1	NP_002892.1	ILMN_1800276	0001500168	S	1989	GGAATGAGGACAAGGTGATACTCTGAGCTGTGGACTGAACTGGCAGACAC	11	+	32083535-32083584	11p13e	Homo sapiens reticulocalbin 1, EF-hand calcium binding domain (RCN1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 8416973] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8416973] [evidence TAS]	FLJ37041; PIG20; RCN; RCAL	FLJ37041; PIG20; RCN; RCAL
Homo sapiens	RefSeq	NM_178453.2	ILMN_30173	MGC52282	NM_178453.2	NM_178453.2		124221	31341948	NM_178453.2	MGC52282	NP_848548.1	ILMN_1770765	0000380437	S	438	GTCTACACCCAGGTGCTAAGCTACACAGACTGGATTCAGAGAACCCTGGC	16	-	2829781-2829830	16p13.3d	Homo sapiens hypothetical protein MGC52282 (MGC52282), mRNA.					
Homo sapiens	RefSeq	NM_015956.2	ILMN_13307	MRPL4	NM_015956.2	NM_015956.2		51073	22547135	NM_015956.2	MRPL4	NP_057040.2	ILMN_1804207	0006220450	A	1120	ACTCACGTTACAGACCCCTCTACCCCTTCAGCCTGCCCTACAGCGACTTC	19	+	10231383-10231432	19p13.2c	Homo sapiens mitochondrial ribosomal protein L4 (MRPL4), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC16367; L4mt; MGC2681; CGI-28	MGC16367; L4mt; MGC2681; CGI-28
Homo sapiens	RefSeq	XR_039577.1	ILMN_346406	LOC100129553	XR_039577.1	XR_039577.1		100129553	169171108	XR_039577.1	LOC100129553		ILMN_3266128	0004390167	M	83	TGCTGGGCCGGAAGGTGGAGGTCGTACGCTGTGAGGGCATCATCATTTCT	7	+	105247256-105247305	7q22.2b	PREDICTED: Homo sapiens misc_RNA (LOC100129553), miscRNA.					
Homo sapiens	RefSeq	NR_030367.1	ILMN_388151	MIR637	NR_030367.1	NR_030367.1		693222	262206173	NR_030367.1	MIR637		ILMN_3309509	0002510301	S	48	GCGTTACTGAGCACTGGGGGCTTTCGGGCTCTGCGTCTGCACAGATACTT				19p13.3e	Homo sapiens microRNA 637 (MIR637), microRNA.					
Homo sapiens	RefSeq	NM_012455.2	ILMN_513	PSD4	NM_012455.2	NM_012455.2		23550	56788369	NM_012455.2	PSD4	NP_036587.2	ILMN_2154115	0004730131	S	4748	CTCCACAAAGTAAGGTTGGCCCTTGGAGGCCATGTTTGGGTCTCCGGCCA	2	+	113676857-113676906	2q13d	Homo sapiens pleckstrin and Sec7 domain containing 4 (PSD4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [evidence IEA]	FLJ37279; EFA6B; TIC; FLJ36237	EFA6B; TIC; FLJ37279; FLJ36237
Homo sapiens	RefSeq	XM_001720105.1	ILMN_353219	LOC732447	XM_001720105.1	XM_001720105.1		732447	169217874	XM_001720105.1	LOC732447	XP_001720157.1	ILMN_3306922	0006940072	M	155	GCCCTGTTGGGGAGCAAAGGAGACATATCCTACTTATCCAAATTCACCAG					PREDICTED: Homo sapiens hypothetical LOC732447 (LOC732447), mRNA.					
Homo sapiens	RefSeq	NM_172337.1	ILMN_16095	OTX2	NM_172337.1	NM_172337.1		5015	27436932	NM_172337.1	OTX2	NP_758840.1	ILMN_1688075	0001820541	A	1785	CCTTTGGCTGGAGGTGAGCTGCACTGAAACTTTACGACAAAATGTCTCTG	14	-	57267659-57267708	14q23.1a	Homo sapiens orthodenticle homeobox 2 (OTX2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [pmid 16267555] [evidence IDA]	The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 16267555] [evidence IDA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; Any process that modulates the frequency, rate or extent of smoothened signaling [goid 8589] [pmid 15705863] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [pmid 15705863] [evidence TAS]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IEA]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [pmid 15705863] [evidence TAS]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [pmid 15705863] [evidence TAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into an eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments [goid 42706] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [pmid 15705863] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MCOPS5; MGC45000	MCOPS5; MGC45000
Homo sapiens	RefSeq	NM_172337.1	ILMN_16095	OTX2	NM_172337.1	NM_172337.1		5015	27436932	NM_172337.1	OTX2	NP_758840.1	ILMN_2323465	0003460546	A	1191	GGGCCTTAGAGGGGCCTACAAACCAGCAACATGAAATGGACAAACCAATC	14	-	57268253-57268302	14q23.1a	Homo sapiens orthodenticle homeobox 2 (OTX2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [pmid 16267555] [evidence IDA]	The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 16267555] [evidence IDA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; Any process that modulates the frequency, rate or extent of smoothened signaling [goid 8589] [pmid 15705863] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [pmid 15705863] [evidence TAS]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IEA]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [pmid 15705863] [evidence TAS]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [pmid 15705863] [evidence TAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into an eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments [goid 42706] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [pmid 15705863] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MCOPS5; MGC45000	MCOPS5; MGC45000
Homo sapiens	RefSeq	NM_003285.1	ILMN_5903	TNR	NM_003285.1	NM_003285.1		7143	4507630	NM_003285.1	TNR	NP_003276.2	ILMN_1806492	0004180070	S	4283	GGATGTCGCAGGAATCCGCTGGCTAACATCTGCTCTTGGTTTCTGCTGCC	1	-	173558941-173558990	1q25.1b	Homo sapiens tenascin R (restrictin, janusin) (TNR), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8940128] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 8940128] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	MGC149328	MGC149328
Homo sapiens	RefSeq	XM_937755.1	ILMN_42326	GAGE1	NM_001468.3	NM_001468.3		2543	98985823	NM_001468.3	GAGE1	NP_001459.2	ILMN_1777424	0000450446	A	436	CGCCTGAAGAAGAGATGAGGTCTCACTATGTTGCCCAGACTGGGATTCTC	X	+	49255329-49255340:49256545-49256582	Xp11.23b	Homo sapiens G antigen 1 (GAGE1), transcript variant 1, mRNA.		A defense response that is mediated by cells [goid 6968] [pmid 7544395] [evidence TAS]		MGC33825	
Homo sapiens	RefSeq	NM_001468.3	ILMN_42326	GAGE1	NM_001468.3	NM_001468.3		2543	98985823	NM_001468.3	GAGE1	NP_001459.2	ILMN_2288639	0007330497	I	520	CCCCACGGAAACCTTGAGTGACTGAAATATCAAATGGCAAGAGACCGTTT	X	+	49256617-49256633:49256634-49256666	Xp11.23b	Homo sapiens G antigen 1 (GAGE1), transcript variant 1, mRNA.		A defense response that is mediated by cells [goid 6968] [pmid 7544395] [evidence TAS]		MGC33825	MGC33825
Homo sapiens	RefSeq	NM_001468.3	ILMN_42326	GAGE1	NM_001468.3	NM_001468.3		2543	98985823	NM_001468.3	GAGE1	NP_001459.2	ILMN_2396551	0004490070	A	797	GCTGTGTGTAGAGGCATAATTCTCATGTATTGATTTTCTATCCAGCAACC	X	+	49257749-49257798	Xp11.23b	Homo sapiens G antigen 1 (GAGE1), transcript variant 1, mRNA.		A defense response that is mediated by cells [goid 6968] [pmid 7544395] [evidence TAS]		MGC33825	MGC33825
Homo sapiens	RefSeq	NM_001017437.1	ILMN_24149	LOC550631	NM_001017437.1	NM_001017437.1		550631	62945237	NM_001017437.1	LOC550631	NP_001017437.1	ILMN_1808053	0002810477	S	2422	TTGCTGGAGGGTGTGACCCACTTGGACACCTGCACCCAGAACCCCATCAA	22	+	29102600-29102649	22q12.2b	Homo sapiens hypothetical LOC550631 (LOC550631), mRNA.					
Homo sapiens	Unigene	Hs.544642	ILMN_108019	HS.544642	Hs.544642		Hs.544642		8167936	AW976704			ILMN_1915949	0002060242	S	407	GACACCAAAACTCAAGAAATGGCAGATTCTTAAAGGTTAGTTGCAGTGTG					EST388813 MAGE resequences, MAGO Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_199141.1	ILMN_5570	CARM1	NM_199141.1	NM_199141.1		10498	40288287	NM_199141.1	CARM1	NP_954592.1	ILMN_1680134	0000460382	S	2806	GGCCTGAGTAGCTCCCCTCCATCCTTGTAGACGCTCCAGTCCCTACTACT	19	+	10894286-10894335	19p13.2b	Homo sapiens coactivator-associated arginine methyltransferase 1 (CARM1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15221992] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15221992] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [evidence ISS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence ISS]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRMT4	PRMT4
Homo sapiens	RefSeq	NM_001005495.1	ILMN_162854	OR2T3	NM_001005495.1	NM_001005495.1		343173	53828741	NM_001005495.1	OR2T3	NP_001005495.1	ILMN_1735906	0006550242	S	667	TACACCCTCATCCTGCATCTCATCCACAGGATGAATTCTGCCGCCGGCCA	1	+	246703941-246703990	1q44f	Homo sapiens olfactory receptor, family 2, subfamily T, member 3 (OR2T3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_000860.3	ILMN_174705	HPGD	NM_000860.3	NM_000860.3		3248	52851450	NM_000860.3	HPGD	NP_000851.2	ILMN_2166457	0004250364	S	1967	GTGACTCATCCTGTCTGCTAACTCCAGACCTCCCAGCTTGAAGCCAAATC	4	-	175648475-175648524	4q34.1d	Homo sapiens hydroxyprostaglandin dehydrogenase 15-(NAD) (HPGD), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15581601] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [pmid 15581601] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 15574495] [evidence IDA]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 15531523] [evidence IDA]; The reproductive process in which the parent is separated from its offspring either by giving birth to live young or by laying eggs [goid 7567] [pmid 15531523] [evidence IDA];  [goid 19372] [pmid 15581601] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 15574495] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 10198228] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+ [goid 16404] [pmid 15581601] [evidence IDA]; Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+ [goid 16404] [pmid 10198228] [evidence IDA]; Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+ [goid 16404] [pmid 2025296] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 2025296] [evidence TAS]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [pmid 10198228] [evidence IDA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [pmid 15581601] [evidence IDA]	PGDH; 15-PGDH; PGDH1	PGDH; 15-PGDH; PGDH1
Homo sapiens	Unigene	Hs.149005	ILMN_78775	HS.149005	Hs.149005		Hs.149005		27824387	BX090577			ILMN_1853193	0002650181	S	265	GGGGCAACTGGCTATCTTTAGTCATCAGCATCAAATCCATCTTCAGCCCG	14	-	56030617-56030666		BX090577 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998K124519 ; IMAGE:1847171, mRNA sequence					
Homo sapiens	RefSeq	NM_013252.2	ILMN_18708	CLEC5A	NM_013252.2	NM_013252.2		23601	31747574	NM_013252.2	CLEC5A	NP_037384.1	ILMN_1780465	0001260228	S	3237	CTAGGTCAGCCAACCCCCATCCAACCCTTAGACTCACGAACAAATCCACC	7	-	141627381-141627430	7q34e	Homo sapiens C-type lectin domain family 5, member A (CLEC5A), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10449773] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 10449773] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10449773] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [pmid 10449773] [evidence TAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MDL1; MGC138304; CLECSF5; MDL-1	MDL1; MGC138304; CLECSF5; MDL-1
Homo sapiens	RefSeq	NM_003635.2	ILMN_21220	NDST2	NM_003635.2	NM_003635.2		8509	31377809	NM_003635.2	NDST2	NP_003626.1	ILMN_2206344	0000110561	S	3596	CTTTAGCCAGGCAGTGGGATCTACCTGTGGCCCGGCCTCCCTAATGTCAT	10	-	75231778-75231827	10q22.2a	Homo sapiens N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 (NDST2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9601056] [evidence TAS]	Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the heparan sulfate proteoglycan, a glycosaminoglycan with repeat unit consisting of alternating (alpha1->4)-linked hexuronic acid and glucosamine residues; the former are a mixture of sulfated and nonsulfated D-glucuronic acid and L-iduronic acid; the L-iduronic acid is either sulfated or acetylated on its amino group as well as being sulfated on one of its hydroxyl groups; heparan sulfate chains are covalently linked to peptidyl-serine by a glycosidic attachment through the trisaccharide galactosyl-galactosyl-xylosyl to serine residues [goid 15012] [evidence IEA]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HSST2; NCST2; NST2; MGC129697; MGC129705	HSST2; NCST2; NST2; MGC129697; MGC129705
Homo sapiens	RefSeq	NM_016584.2	ILMN_20797	IL23A	NM_016584.2	NM_016584.2		51561	28144902	NM_016584.2	IL23A	NP_057668.1	ILMN_1715603	0006510026	S	727	GAGTCCCTAAAGGCAGCAGCTCAAGGATGGCACTCAGATCTCCATGGCCC	12	+	55020146-55020155:55020156-55020195	12q13.2c	Homo sapiens interleukin 23, alpha subunit p19 (IL23A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling [goid 48771] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	IL-23A; IL23P19; MGC79388; SGRF; P19; IL-23	IL-23A; IL23P19; MGC79388; SGRF; P19; IL-23
Homo sapiens	RefSeq	NM_018036.4	ILMN_9364	ATG2B	NM_018036.5	NM_018036.5		55102	118197271	NM_018036.5	ATG2B	NP_060506.5	ILMN_1735006	0004780762	S	7131	CTCCGAAAATCCTTCTGTGGGGGTTTGAGAAAGTGAATGTTGCAGACATG	14	-	96751513-96751562	14q32.2a	Homo sapiens ATG2 autophagy related 2 homolog B (S. cerevisiae) (ATG2B), mRNA.				C14orf103; FLJ10242	FLJ10242
Homo sapiens	RefSeq	NR_026551.1	ILMN_370558	CA5BP	NR_026551.1	NR_026551.1		340591	219521884	NR_026551.1	CA5BP		ILMN_3239383	0005130441	S	945	GCCGCTGAGCAGAGCCCTCACTCCCAGGCAGAGTTGTCTGAATCCTTCCT	X	+	15721425-15721474	Xp22.2	Homo sapiens carbonic anhydrase VB pseudogene (CA5BP), non-coding RNA.					
Homo sapiens	RefSeq	NM_014801.2	ILMN_10704	PCNXL2	NM_014801.2	NM_014801.2		80003	33946288	NM_014801.2	PCNXL2	NP_055616.2	ILMN_2295918	0006550475	I	5559	CATGTGAGCCCCCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGT	1	-	231186784-231186833	1q42.2b-q42.2c	Homo sapiens pecanex-like 2 (Drosophila) (PCNXL2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA0435; FLJ11383	KIAA0435; FLJ11383
Homo sapiens	RefSeq	NM_012405.2	ILMN_31192	ICMT	NM_012405.3	NM_012405.3		23463	89142738	NM_012405.3	ICMT	NP_036537.1	ILMN_1723021	0005550348	A	4552	CCTCGGCCTCTCTGTCATGCTGGGAAGTGCCTACTCTCTGGGCCACTGCT	1	-	6281466-6281515	1p36.31a	Homo sapiens isoprenylcysteine carboxyl methyltransferase (ICMT), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10441503] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9614111] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9614111] [evidence TAS]; The methylation of the C-terminal amino acid of a protein [goid 6481] [pmid 10441503] [evidence TAS]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 9614111] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-methionine + protein C-terminal S-farnesyl-L-cysteine = S-adenosyl-L-homocysteine + protein C-terminal S-farnesyl-L-cysteine methyl ester [goid 4671] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MST098; PCMT; PCCMT; PPMT; HSTE14; MSTP098; MGC39955	MST098; PCMT; PCCMT; PPMT; HSTE14; MSTP098; MGC39955
Homo sapiens	RefSeq	XM_943087.1	ILMN_138927	CTNND1	XM_943087.1	XM_943087.1		1500	89034717	XM_943087.1	CTNND1	XP_948180.1	ILMN_1651944	0002760594	I	3124	GAAGGACCCTCCCCCGCTTCATAGTTTATGAATGCGAGAGTTGGTAAGGG				11q12.1b	PREDICTED: Homo sapiens catenin (cadherin-associated protein), delta 1, transcript variant 3 (CTNND1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 98317528] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 98317528] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	Unigene	Hs.546079	ILMN_109132	HS.546079	Hs.546079		Hs.546079		2411146	AA595796			ILMN_1907870	0000510095	S	305	GCTTCCCTCATGCTCTATGCACCTAGATACTGCTTGGAATCTGACCCACG					nk67f12.s1 NCI_CGAP_Sch1 Homo sapiens cDNA clone IMAGE:1018607 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001989.2	ILMN_27085	EVX1	NM_001989.3	NM_001989.3		2128	84043964	NM_001989.3	EVX1	NP_001980.1	ILMN_1766888	0000610110	S	1808	CCTAGGACGCCAAGGGGGAAAGGAGAGGGCGGAAAAGGACCAGCGGGATC	7	+	27252667-27252716	7p15.2a	Homo sapiens even-skipped homeobox 1 (EVX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1684419] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_198695.1	ILMN_10900	KRTAP10-8	NM_198695.1	NM_198695.1		386681	38490582	NM_198695.1	KRTAP10-8	NP_941968.1	ILMN_1793716	0006510097	S	494	TTCTCCCCATGCCAACAGGCCTGCTGTGTGCCCATCTGCTGCAAGCCCAT	21	+	44856917-44856966	21q22.3d	Homo sapiens keratin associated protein 10-8 (KRTAP10-8), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KRTAP18.8; KRTAP18-8; KAP10.8	KRTAP18.8; KRTAP18-8; KAP10.8
Homo sapiens	RefSeq	XR_017100.2	ILMN_173271	LOC149501	XR_017100.2	XR_017100.2		149501	169162674	XR_017100.2	LOC149501		ILMN_3280842	0002260037	M	1518	AGGAAGCTGGTGTCCGAGTCCTCCGACTCCTGCCCAAGTGAACAGCTGAG	1	+	155311079-155311128	1q23.1b	PREDICTED: Homo sapiens misc_RNA (LOC149501), miscRNA.					
Homo sapiens	RefSeq	XM_001724283.1	ILMN_344048	LOC728288	XM_001724283.1	XM_001724283.1		728288	169208799	XM_001724283.1	LOC728288	XP_001724335.1	ILMN_3302223	0001090161	M	1546	CTCGCTTTCATTTCTGGGCCGGGGACAGGCAGACACTGAGTCCTTTCAGC				15q14c	PREDICTED: Homo sapiens hypothetical LOC728288 (LOC728288), mRNA.					
Homo sapiens	RefSeq	NM_005041.3	ILMN_28175	PRF1	NM_005041.4	NM_005041.4		5551	133908619	NM_005041.4	PRF1	NP_005032.2	ILMN_1740633	0004670193	S	2179	GATTCACCCTGTCCAAACTGCCTAAGCCCTCCGCCATTCTCAAGCCCTGC	10	-	72357383-72357432	10q22.1b	Homo sapiens perforin 1 (pore forming protein) (PRF1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10779745] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10779745] [evidence TAS]; The set of specific processes that generate the ability of an organism to cause disease in another [goid 9405] [pmid 1505959] [evidence TAS]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	HPLH2; FLH2; P1; MGC65093; PFP	HPLH2; FLH2; P1; MGC65093; PFP
Homo sapiens	RefSeq	NR_030157.1	ILMN_387782	MIR376B	NR_030157.1	NR_030157.1		574435	262205125	NR_030157.1	MIR376B		ILMN_3310598	0004490026	S	21	AACGTGGATATTCCTTCTATGTTTACGTGATTCCTGGTTAATCATAGAGG				14q32.31a	Homo sapiens microRNA 376b (MIR376B), microRNA.					
Homo sapiens	RefSeq	NM_203424.1	ILMN_27508	IQCF2	NM_203424.1	NM_203424.1		389123	44662816	NM_203424.1	IQCF2	NP_982248.1	ILMN_1681576	0006370575	S	349	TCAAGCTCCAGTCTTTGGTCCGTATGTGGCGTGTCCGCTGGCGATACTGC	3	+	51872242-51872291	3p21.1e	Homo sapiens IQ motif containing F2 (IQCF2), mRNA.				MGC50809	MGC50809
Homo sapiens	RefSeq	NM_014432.2	ILMN_16908	IL20RA	NM_014432.2	NM_014432.2		53832	31083155	NM_014432.2	IL20RA	NP_055247.2	ILMN_1695107	0006450482	S	3412	ATTGGTACAGGCAGACAACCCTGGTAGGAGAGATGGATTCTGGGGTCATG	6	-	137363542-137363591	6q23.3c	Homo sapiens interleukin 20 receptor, alpha (IL20RA), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	ZCYTOR7; FLJ40993; IL-20R1	ZCYTOR7; FLJ40993; IL-20R1
Homo sapiens	RefSeq	NM_138578.1	ILMN_12148	BCL2L1	NM_138578.1	NM_138578.1		598	20336334	NM_138578.1	BCL2L1	NP_612815.1	ILMN_1654118	0000670673	A	2308	AGCGTGTCTGTATTTATGTGTGAGGAGCTGCTGGCTTGCAGTGCGCGTGC	20	-	30252462-30252511	20q11.21b	Homo sapiens BCL2-like 1 (BCL2L1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12011449] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 12667443] [evidence NAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 9727492] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10198631] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10195903] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 11463392] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [pmid 9843949] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [pmid 8358789] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [pmid 9843949] [evidence IDA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [pmid 9843949] [evidence IDA]	Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15131699] [evidence IPI]	DKFZp781P2092; BCL-XL/S; bcl-xL; BCLX; Bcl-X; bcl-xS; BCL2L	DKFZp781P2092; BCL-XL/S; bcl-xL; BCLX; Bcl-X; bcl-xS; BCL2L
Homo sapiens	RefSeq	NM_138578.1	ILMN_12148	BCL2L1	NM_138578.1	NM_138578.1		598	20336334	NM_138578.1	BCL2L1	NP_612815.1	ILMN_1742410	0004290411	I	820	GTGGAAAGCGTAGACAAGGAGATGCAGGTATTGGTGAGTCGGATCGCAGC	20	-	30309518-30309567	20q11.21b	Homo sapiens BCL2-like 1 (BCL2L1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12011449] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 12667443] [evidence NAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 9727492] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10198631] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10195903] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 11463392] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [pmid 9843949] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 8634] [pmid 8358789] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [pmid 9843949] [evidence IDA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [pmid 9843949] [evidence IDA]	Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15131699] [evidence IPI]	DKFZp781P2092; BCL-XL/S; bcl-xL; BCLX; Bcl-X; bcl-xS; BCL2L	DKFZp781P2092; BCL-XL/S; bcl-xL; BCLX; Bcl-X; bcl-xS; BCL2L
Homo sapiens	RefSeq	NM_012108.1	ILMN_7936	BRDG1	NM_012108.1	NM_012108.1		26228	6912271	NM_012108.1	BRDG1	NP_036240.1	ILMN_1781085	0003870458	S	1402	TACCTAGCTGGAAGTTAGAGACATGAAATGTACTAGAGGAGCCCTTTTCC	4	+	68155102-68155151	4q13.2b	Homo sapiens BCR downstream signaling 1 (BRDG1), mRNA.				STAP1	STAP1
Homo sapiens	RefSeq	NM_032373.2	ILMN_8341	PCGF5	NM_032373.3	NM_032373.3		84333	83816965	NM_032373.3	PCGF5	NP_115749.2	ILMN_1788059	0003440377	S	3179	TCACAAGTGAGACTTTGATGTTTTGGCCCCCCAGCCAAAACTTAATGGTC	10	+	93028982-93029031	10q23.32a	Homo sapiens polycomb group ring finger 5 (PCGF5), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 11256614] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC16202; RNF159	MGC16202; RNF159
Homo sapiens	RefSeq	NM_000543.3	ILMN_10742	SMPD1	NM_000543.3	NM_000543.3		6609	56117839	NM_000543.3	SMPD1	NP_000534.3	ILMN_1741684	0000070433	I	1272	GGGGTTCTATGCTCTTTCCCCATACCCCGGTCTCCGCCTCATCTCTCTCA	11	+	6371028-6371077	11p15.4c	Homo sapiens sphingomyelin phosphodiesterase 1, acid lysosomal (SMPD1), transcript variant ASM-1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 1740330] [evidence NAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 1740330] [evidence NAS]; The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 1740330] [evidence NAS]; The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 1740330] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7670466] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 7670466] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [pmid 1740330] [evidence NAS]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [pmid 1718266] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	ASM; NPD	ASM; NPD
Homo sapiens	RefSeq	NM_198557.2	ILMN_370805	RBM43	NM_198557.2	NM_198557.2		375287	215272324	NM_198557.2	RBM43	NP_940959.1	ILMN_3251415	0007560296	S	3361	TCAGAGCACCCACGAAATGAGCTCTCAAAGTTCAAAGGCATGCCAGAATA	2	-	152105231-152105280	2q23.3b	Homo sapiens RNA binding motif protein 43 (RBM43), mRNA.					
Homo sapiens	RefSeq	XM_001725051.1	ILMN_334290	LOC100130814	XM_001725051.1	XM_001725051.1		100130814	169207719	XM_001725051.1	LOC100130814	XP_001725103.1	ILMN_3252349	0000730161	M	491	TGGTTTCCTGGGGACTCTGCTCCGCTGACTTCTGAGCTGTGGGAGCTGTA				14q32.31a	PREDICTED: Homo sapiens hypothetical LOC100130814 (LOC100130814), mRNA.					
Homo sapiens	Unigene	Hs.130639	ILMN_77016	HS.130639	Hs.130639		Hs.130639		27835884	BX109627			ILMN_1901646	0002140152	S	109	CTGGGCTGTCAGTAAGTCAGGCAGTCAGTCCACAGCTCTTTCTAGGTGGA	8	+	33790353-33790402		BX109627 NCI_CGAP_Brn25 Homo sapiens cDNA clone IMAGp998C184969, mRNA sequence					
Homo sapiens	RefSeq	NM_002633.2	ILMN_20106	PGM1	NM_002633.2	NM_002633.2		5236	21361620	NM_002633.2	PGM1	NP_002624.2	ILMN_1800659	0002070291	S	2131	GCCCTCCTGCATTGCTGCTGCGTGGGTATTTGTCTCCTTAGCCATCAGGT	1	+	63898163-63898212	1p31.3c	Homo sapiens phosphoglucomutase 1 (PGM1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1530890] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7902568] [evidence EXP]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [pmid 1530890] [evidence NAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IEA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [pmid 1530890] [evidence IDA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [pmid 7902568] [evidence EXP]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]		
Homo sapiens	RefSeq	NM_014059.1	ILMN_14549	C13ORF15	NM_014059.2	NM_014059.2		28984	132626810	NM_014059.2	C13orf15	NP_054778.2	ILMN_1658494	0000160242	S	797	TCTGCTGCCAGAGGGGACAAAGACGTGCACTCAACCTTCTACCAGGCCAC	13	+	40942702-40942751	13q14.11b	Homo sapiens chromosome 13 open reading frame 15 (C13orf15), mRNA.				RGC-32; KIAA0564; bA157L14.2; MGC87338; RGC32	bA157L14.2; MGC87338; KIAA0564
Homo sapiens	RefSeq	NM_206889.1	ILMN_25874	DIP2A	NM_206889.1	NM_206889.1		23181	45827693	NM_206889.1	DIP2A	NP_996772.1	ILMN_1729272	0000990435	I	2864	AAGTGGTTGGCTTGTCCCGCCCGGTCCTCCCTGGCTCCAGCTTTGTTTAT	21	+	46794298-46794347	21q22.3f	Homo sapiens DIP2 disco-interacting protein 2 homolog A (Drosophila) (DIP2A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	DIP2; C21orf106	DIP2; C21orf106
Homo sapiens	RefSeq	NM_003091.3	ILMN_14667	SNRPB	NM_003091.3	NM_003091.3		6628	38149990	NM_003091.3	SNRPB	NP_003082.1	ILMN_1799103	0004860243	I	896	GCGTGGGCTCGATTCCTCAGGGCCACGTTACCACAGACCTGTTTGTTTCT	20	-	2442488-2442537	20p13d	Homo sapiens small nuclear ribonucleoprotein polypeptides B and B1 (SNRPB), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [pmid 2524838] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 2531083] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 2531083] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 2524838] [evidence NAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 2531083] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11748230] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]	snRNP-B; COD; SNRPB1; SmB/SmB'	snRNP-B; SNRPB1; COD; SmB/SmB'
Homo sapiens	RefSeq	NM_003091.3	ILMN_14667	SNRPB	NM_003091.3	NM_003091.3		6628	38149990	NM_003091.3	SNRPB	NP_003082.1	ILMN_1774661	0002070349	A	1018	CCACCAAGGCCCTAGACTCATCTTGGCCCTCCTCAGCTCCCTGCCTGTTT	20	-	2442366-2442415	20p13d	Homo sapiens small nuclear ribonucleoprotein polypeptides B and B1 (SNRPB), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [pmid 2524838] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 2531083] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 2531083] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 2524838] [evidence NAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 2531083] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11748230] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]	snRNP-B; COD; SNRPB1; SmB/SmB'	snRNP-B; SNRPB1; COD; SmB/SmB'
Homo sapiens	RefSeq	XM_928998.1	ILMN_39259	LOC646037	XM_928998.1	XM_928998.1		646037	89041350	XM_928998.1	LOC646037	XP_934091.1	ILMN_1683641	0002120553	S	121	ATAGAAGGTGTCTTCAAATCCAAGCCAGGCTCTTATCCGGTGTCAGCCCT	17	-	26401893-26401904:26403863-26403900	17q11.2c	PREDICTED: Homo sapiens similar to CG11835-PA (LOC646037), mRNA.					
Homo sapiens	RefSeq	XM_932248.1	ILMN_40123	LOC644569	XM_932248.1	XM_932248.1		644569	88995891	XM_932248.1	LOC644569	XP_937341.1	ILMN_1669494	0000050356	S	5	GAGAAATCCAGATTCTATTAGAAAACAGGAACGACAGATATGATGAGATC	6	+	95111171-95111220	6q16.1d	PREDICTED: Homo sapiens similar to 60S ribosomal protein L7a (LOC644569), mRNA.					
Homo sapiens	RefSeq	NM_001005911.1	ILMN_4437	IP6K2	NM_001005911.1	NM_001005911.1		51447	55769523	NM_001005911.1	IP6K2	NP_001005911.1	ILMN_3262348	0006660682	M	909	TTTATAAGAACAAAAGGCCTGGGTGCCTACCCGTGTGGGGGCACTGTGGG	3	-	48731161-48731210	3p21.31e	Homo sapiens inositol hexakisphosphate kinase 2 (IP6K2), transcript variant 4, mRNA.				IP6K2; PiUS	IP6K2; PiUS
Homo sapiens	RefSeq	NR_031745.1	ILMN_388666	MIR2053	NR_031745.1	NR_031745.1		100302225	269847692	NR_031745.1	MIR2053		ILMN_3309054	0001110682	S	3	GCCATGTAAATACAGATTTAATTAACATTTGCAACCTGTGAAGATGCAAA					Homo sapiens microRNA 2053 (MIR2053), microRNA.					
Homo sapiens	RefSeq	XM_001725030.1	ILMN_337882	LOC100134006	XM_001725030.1	XM_001725030.1		100134006	169203038	XM_001725030.1	LOC100134006	XP_001725082.1	ILMN_3202697	0005890373	A	241	TGGCAAGACATCCCAATTCTTACTCAGTGCTTTGAATGCCTAAAGACAAC					PREDICTED: Homo sapiens similar to ring finger protein 18, transcript variant 1 (LOC100134006), mRNA.					
Homo sapiens	RefSeq	XM_001725030.1	ILMN_337882	LOC100134006	XM_001725030.1	XM_001725030.1		100134006	169203038	XM_001725030.1	LOC100134006	XP_001725082.1	ILMN_3279169	0000430750	M	1	GGTGACCTCTGAAACTCAGTACTGCGGCGAATGAGCTCCTGACCTTGAGG					PREDICTED: Homo sapiens similar to ring finger protein 18, transcript variant 1 (LOC100134006), mRNA.					
Homo sapiens	RefSeq	NM_002758.2	ILMN_42283	MAP2K6	NM_002758.3	NM_002758.3		5608	90577186	NM_002758.3	MAP2K6	NP_002749.2	ILMN_1697729	0004900017	I	150	TGCTGCATCGGTCAAGAGAAACTCCACTTGCATGAAGATTGCACGCCTGC	17	+	64922582-64922631	17q24.3a	Homo sapiens mitogen-activated protein kinase kinase 6 (MAP2K6), mRNA.		The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The widespread phosphorylation of various molecules, triggering many downstream processes, that occurs in response to the detection of DNA damage [goid 6975] [pmid 10848581] [evidence TAS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10848581] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8621675] [evidence TAS]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 10848581] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12761180] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MEK6; MKK6; PRKMK6; SAPKK3; MAPKK6	MEK6; MKK6; PRKMK6; SAPKK3; MAPKK6
Homo sapiens	RefSeq	XM_001722278.1	ILMN_351218	LOC100132377	XM_001722278.1	XM_001722278.1		100132377	169216556	XM_001722278.1	LOC100132377	XP_001722330.1	ILMN_3248260	0001690138	S	498	TTGGGGGAAGTTTCCTCGTGCACTTTGGGTCTCTTACTCTGCGCATGTGG	X	+	849431-849480		PREDICTED: Homo sapiens hypothetical protein LOC100132377 (LOC100132377), mRNA.					
Homo sapiens	RefSeq	XM_937000.1	ILMN_36769	LOC147645	XM_937000.1	XM_937000.1		147645	89057601	XM_937000.1	LOC147645	XP_942093.1	ILMN_1765979	0005220133	A	3311	CGACCGTTCCCTTACCCCTCCCTTAGTCTTGGGTTAAGTCCCAGAATCCT				19q13.33d	PREDICTED: Homo sapiens hypothetical protein LOC147645 (LOC147645), mRNA.					
Homo sapiens	RefSeq	NM_182830.2	ILMN_162215	MDGA2	NM_182830.2	NM_182830.2		161357	38158012	NM_182830.2	MDGA2	NP_878250.2	ILMN_1684447	0004880026	S	4203	TCTGAGGGTAATATGCCTCTGCCCTTTAGTCAGACTCTGTGCAAATTGTG	14	-	46379519-46379568	14q21.3c	Homo sapiens MAM domain containing glycosylphosphatidylinositol anchor 2 (MDGA2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21522] [pmid 15019943] [evidence ISS]		c14_5286; MDGA2; MAMDC1	c14_5286; MDGA2
Homo sapiens	RefSeq	NM_176869.1	ILMN_15516	PPA2	NM_001034191.1	NM_001034191.1		27068	77812683	NM_001034191.1	PPA2	NP_001029363.1	ILMN_1755041	0006620491	I	413	GGAAGATCCCCATGAAAAAGATAAGAGCACGAACTGCTTTGGAGATAATG	4	-	106578587-106578636	4q24d	Homo sapiens pyrophosphatase (inorganic) 2 (PPA2), nuclear gene encoding mitochondrial protein, transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IEA]; The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IEA]; The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]	HSPC124; FLJ20459; MGC49850; SID6-306	HSPC124; MGC49850; SID6-306
Homo sapiens	RefSeq	NM_005332.2	ILMN_19775	HBZ	NM_005332.2	NM_005332.2		3050	6633805	NM_005332.2	HBZ	NP_005323.1	ILMN_1713458	0006980192	S	529	GTCCTGGAGGTTCCCCAGCCCCACTTACCGCGTAATGCGCCAATAAACCA	16	+	144444-144493	16p13.3f	Homo sapiens hemoglobin, zeta (HBZ), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [pmid 7555018] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]	Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [pmid 7555018] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_015601.2	ILMN_5477	HERC4	NM_015601.2	NM_015601.2		26091	37620180	NM_015601.2	HERC4	NP_056416.2	ILMN_2370160	0002630050	A	2810	TGGTGCAACAGAAGTGAAAGAGCTGGTTCTAAATGGTGCAGACACAGCTG	10	-	69365931-69365980	10q21.3d	Homo sapiens hect domain and RLD 4 (HERC4), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	KIAA1593; DKFZP564G092	KIAA1593; DKFZP564G092
Homo sapiens	RefSeq	NM_016196.1	ILMN_27753	RBM19	NM_016196.2	NM_016196.2		9904	142371317	NM_016196.2	RBM19	NP_057280.1	ILMN_1774839	0003310576	I	1614	CTCTCACAACTGGAACACACTATTCATGGGGCCGAATGCCGTGGCCGATG	12	-	112868062-112868111	12q24.13b-q24.21a	Homo sapiens RNA binding motif protein 19 (RBM19), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	NPO; DKFZp586F1023; KIAA0682	NPO; DKFZp586F1023; KIAA0682
Homo sapiens	RefSeq	XM_370899.4	ILMN_37930	LOC642432	XM_370899.4	XM_370899.4		642432	89038632	XM_370899.4	LOC642432	XP_370899.4	ILMN_1744754	0004120246	A	5189	CGGCAGCGCAATCTACTGTTTGTGACTGTCAAAGTGTCATGAGGAAAGTG	15	+	83592868-83592917		PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a-like, transcript variant 1 (LOC642432), mRNA.					
Homo sapiens	RefSeq	NM_138458.1	ILMN_37809	WDR92	NM_138458.2	NM_138458.2		116143	89242164	NM_138458.2	WDR92	NP_612467.1	ILMN_1662065	0007560136	S	1646	CTGCTGCACGTGGGTATCAGAAGCACCAAGTAAACTATCTCCAGGGCCAG	2	-	68357829-68357878	2p14b	Homo sapiens WD repeat domain 92 (WDR92), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ31741	
Homo sapiens	RefSeq	NM_152481.1	ILMN_22252	FAM187B	NM_152481.1	NM_152481.1		148109	22749004	NM_152481.1	FAM187B	NP_689694.1	ILMN_3236452	0000010646	S	958	CTGGAGGCTCAGTGGAGAGAGAACGATGCCCAGTGGCGGGAGGCAAGGAA	19	-	40407715-40407764	19q13.12a	Homo sapiens family with sequence similarity 187, member B (FAM187B), mRNA.				FLJ25660	FLJ25660
Homo sapiens	RefSeq	NM_152481.1	ILMN_22252	FAM187B	NM_152481.1	NM_152481.1		148109	22749004	NM_152481.1	FAM187B	NP_689694.1	ILMN_1739559	0000430193	S	865	AGGCAGCTGCAGGTTTTCCAGCCGGCCGTCTACAAGTGCTTCGTGCAGCA	19	-	40407808-40407857	19q13.12a	Homo sapiens family with sequence similarity 187, member B (FAM187B), mRNA.				FLJ25660	FLJ25660
Homo sapiens	RefSeq	XR_038784.1	ILMN_334578	LOC100131104	XR_038784.1	XR_038784.1		100131104	169170861	XR_038784.1	LOC100131104		ILMN_3198679	0004560224	A	248	ATCAAGCAAGCTTTTTTGAGACAGAAAACGTCCCAAGAATTAAGCACAAG	7	+	7986768-7986817	7p21.3e	PREDICTED: Homo sapiens misc_RNA (LOC100131104), miscRNA.					
Homo sapiens	RefSeq	XR_038933.1	ILMN_341976	LOC730052	XR_038933.1	XR_038933.1		730052	169165630	XR_038933.1	LOC730052		ILMN_3301168	0007150497	M	296	TCTAATGGAGTGGTGGACCCAAGAGCATATCAGTGCTAGCAAAATGGCAG				3q26.31d	PREDICTED: Homo sapiens misc_RNA (LOC730052), miscRNA.					
Homo sapiens	RefSeq	NM_003243.2	ILMN_22620	TGFBR3	NM_003243.2	NM_003243.2		7049	56682965	NM_003243.2	TGFBR3	NP_003234.2	ILMN_1784287	0003190379	S	3974	TGCATGGCAAATCCTGTCGGTCTCCAGTTGGTTATCTGAATAGTGTCACC	1	-	91920750-91920799	1p22.2a-p22.1e	Homo sapiens transforming growth factor, beta receptor III (TGFBR3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 18184661] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [pmid 12958365] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [pmid 18184661] [evidence IDA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence ISS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 16886151] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 12958365] [evidence IDA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 11157754] [evidence IMP]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 14557487] [evidence IMP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 1333192] [evidence ISS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence ISS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 18184661] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a follicle-stimulating hormone stimulus [goid 32354] [pmid 14557487] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [pmid 17999987] [evidence IDA]	Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [pmid 12958365] [evidence IDA]; Interacting selectively with a type II transforming growth factor beta receptor [goid 5114] [pmid 11157754] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10746731] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12958365] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11157754] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18184661] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10746731] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18184661] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 1333192] [evidence ISS]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 10746731] [evidence IDA]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [pmid 12958365] [evidence IDA]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [pmid 11157754] [evidence IDA]	BGCAN; betaglycan	BGCAN; betaglycan
Homo sapiens	Unigene	Hs.211559	ILMN_82234	HS.211559	Hs.211559		Hs.211559		27841760	BX093828			ILMN_1828337	0002760192	S	1	CCAGGCGTGAGCCACCACGCCGGACTGGAATAGAAGTTTTTGATTCAAGG	18	+	1531647-1531696		BX093828 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998B075852, mRNA sequence					
Homo sapiens	RefSeq	NM_016347.1	ILMN_168043	NAT8B	NM_016347.2	NM_016347.2		51471	117168282	NM_016347.2	NAT8B	NP_057431.2	ILMN_1691264	0006560398	S	757	CGGCTGTAGCAGCAAGCAATCCCCAACCTCTGACTGCAATGACCTTTCTG	2	-	73927661-73927710	2p13.2a	Homo sapiens N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene) (NAT8B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11397015] [evidence NAS]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [pmid 11397015] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [pmid 11397015] [evidence NAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Hcml2; CML2; NAT8BP; MGC97061	MGC97061
Homo sapiens	RefSeq	XM_929293.1	ILMN_39985	LOC643695	XM_929293.1	XM_929293.1		643695	88942973	XM_929293.1	LOC643695	XP_934386.1	ILMN_1653198	0002650279	S	241	TGAGAGTTTTTCCTCAGATCAGGCCTGTCTGACAATCTATCAGCAATGAA	1	+	117109266-117109310:117109311-117109315		PREDICTED: Homo sapiens hypothetical protein LOC643695 (LOC643695), mRNA.					
Homo sapiens	RefSeq	NR_004426.1	ILMN_342067	RNU1G2	NR_004426.1	NR_004426.1		26864	161333874	NR_004426.1	RNU1G2		ILMN_3244646	0002360091	S	78	TGTGCTGCCCCTGCGATTTCCCCAAATGTGGGAAACTCGACTGCATAATT	1	-	145969306-145969355		Homo sapiens RNA, U1G2 small nuclear (RNU1G2), small nuclear RNA.				U1D2; U1B2; HSD5	U1D2; U1B2; HSD5
Homo sapiens	RefSeq	NR_030176.1	ILMN_387814	MIR496	NR_030176.1	NR_030176.1		574454	262205226	NR_030176.1	MIR496		ILMN_3308425	0000240451	S	52	TGATGAGTATTACATGGCCAATCTCCTTTCGGTACTCAATTCTTCTTGGG				14q32.31a	Homo sapiens microRNA 496 (MIR496), microRNA.					
Homo sapiens	RefSeq	NM_020806.4	ILMN_29329	GPHN	NM_001024218.1	NM_001024218.1		10243	66932974	NM_001024218.1	GPHN	NP_001019389.1	ILMN_1677962	0001110544	A	3859	GAACCATCCCCTGCAGAGCATCCAGGGAGGTTTCTCGCCCCAATAGCCTC	14	+	66717934-66717983	14q23.3b	Homo sapiens gephyrin (GPHN), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The biological process by which a synapse between a motor neuron and a muscle is initially formed [goid 7529] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	GPHRYN; GPH; GEPH; KIAA1385	GPHRYN; GPH; GEPH; KIAA1385
Homo sapiens	RefSeq	XM_930192.1	ILMN_35285	LOC647166	XM_930192.2	XM_930192.2		647166	113424169	XM_930192.2	LOC647166	XP_935285.2	ILMN_1784395	0005260228	S	208	GTCTGCCCCACAAATGTGGCCACCCTTCAGCTCACTGATGCTTCTGTGCA	13	-	50584103-50584152	13q14.3c	PREDICTED: Homo sapiens similar to hCG28707 (LOC647166), mRNA.					
Homo sapiens	RefSeq	NM_145119.2	ILMN_8110	PJA1	NM_145119.2	NM_145119.2		64219	74048494	NM_145119.2	PJA1	NP_660095.1	ILMN_1667261	0006480736	I	311	GTATGGCCCAATCCAACAGGAGGGTATCAGTCCAATACAGGTAGGAGGTA	X	-	68383007-68383056	Xq13.1a	Homo sapiens praja ring finger 1 (PJA1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF70	RNF70
Homo sapiens	RefSeq	NM_145119.2	ILMN_8110	PJA1	NM_145119.2	NM_145119.2		64219	74048494	NM_145119.2	PJA1	NP_660095.1	ILMN_1734810	0000780735	A	2194	CTGCATGTTCCCTCCCCCACTCTAAAGACCAAGGCCGTTTACTCCTGGTC	X	-	68381124-68381149:68381150-68381173	Xq13.1a	Homo sapiens praja ring finger 1 (PJA1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF70	RNF70
Homo sapiens	RefSeq	XR_038187.1	ILMN_341019	LOC728088	XR_038187.1	XR_038187.1		728088	169206284	XR_038187.1	LOC728088		ILMN_3282972	0006400102	M	537	ACATCTGCAGGCCAAAAGAGCCCTGGCCCTTGGAAACGGCCGTAAGTTCC				13q32.3b	PREDICTED: Homo sapiens misc_RNA (LOC728088), miscRNA.					
Homo sapiens	Unigene	Hs.132394	ILMN_77313	HS.132394	Hs.132394		Hs.132394		27877773	BX109538			ILMN_1883399	0007000725	S	147	AGCTCGCAAAGTAGGTCGGGGTCTGAAGCTGGGGGCCTAGAGCAACTAGC	9	+	93223798-93223847		BX109538 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998A134175, mRNA sequence					
Homo sapiens	RefSeq	NM_198956.1	ILMN_24886	SP8	NM_198956.1	NM_198956.1		221833	39812500	NM_198956.1	SP8	NP_945194.1	ILMN_1699803	0001400364	I	119	TGCTCCCGAATCAGACGCCGGCAGCCAAACTTGTCCCCTCCTGTAGAGTA	7	-	20792128-20792177	7p15.3d	Homo sapiens Sp8 transcription factor (SP8), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BTD	BTD
Homo sapiens	RefSeq	NM_178858.3	ILMN_164273	SFXN2	NM_178858.3	NM_178858.3		118980	34222270	NM_178858.3	SFXN2	NP_849189.1	ILMN_1795976	0005720553	S	2235	GGCTGCCTCCCTTCCTCAGCCCATTAGGTTAAACACCAAAGAAAGACTGG	10	+	104488609-104488658	10q24.32b	Homo sapiens sideroflexin 2 (SFXN2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]		
Homo sapiens	RefSeq	NM_003721.2	ILMN_7789	RFXANK	NM_003721.2	NM_003721.2		8625	19924154	NM_003721.2	RFXANK	NP_003712.1	ILMN_1804113	0001300553	I	792	AGCTCGCAGCACAGGGGGAGCTGGACCAGCTGAAGGAGCATTTGCGGAAA	19	+	19169010-19169059	19p13.11b	Homo sapiens regulatory factor X-associated ankyrin-containing protein (RFXANK), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9806546] [evidence NAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 10072068] [evidence TAS]	BLS; RFX-B; MGC138628; F14150_1; ANKRA1	BLS; RFX-B; MGC138628; F14150_1; ANKRA1
Homo sapiens	RefSeq	NM_003721.2	ILMN_7789	RFXANK	NM_003721.2	NM_003721.2		8625	19924154	NM_003721.2	RFXANK	NP_003712.1	ILMN_1780987	0006580603	A	1086	TGCTGTACGCTGTGCGCGGGAACCACGTGAAATGCGTTGAGGCCTTGCTG	19	+	19170482-19170531	19p13.11b	Homo sapiens regulatory factor X-associated ankyrin-containing protein (RFXANK), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9806546] [evidence NAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 10072068] [evidence TAS]	BLS; RFX-B; MGC138628; F14150_1; ANKRA1	BLS; RFX-B; MGC138628; F14150_1; ANKRA1
Homo sapiens	RefSeq	NM_016583.2	ILMN_13732	PLUNC	NM_130852.1	NM_130852.1		51297	18765704	NM_130852.1	PLUNC	NP_570913.1	ILMN_1774250	0006420687	A	593	CCTGGTCCTTGGTGACTGCACCCATTCCCCTGGAAGCCTGCAAATTTCTC	20	+	31291794-31291843	20q11.21c	Homo sapiens palate, lung and nasal epithelium carcinoma associated (PLUNC), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11425234] [evidence IDA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 11971875] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	SPLUNC1; SPURT; NASG; bA49G10.5; LUNX	SPLUNC1; SPURT; NASG; bA49G10.5; LUNX
Homo sapiens	RefSeq	XM_945706.1	ILMN_139396	CHKA	XM_945706.1	XM_945706.1		1119	89034938	XM_945706.1	CHKA	XP_950799.1	ILMN_1687429	0005560196	I	207	TGTGCCAGGTTTCCTGCCTGCACAGCGCTTTCTTCTCTGTCCAAGTTCTG				11q13.2a	PREDICTED: Homo sapiens choline kinase alpha, transcript variant 4 (CHKA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10363580] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [pmid 10363580] [evidence TAS]	Catalysis of the reaction: ATP + choline = ADP + O-phosphocholine [goid 4103] [pmid 10363580] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10363580] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Functions in the storage of nutritious substrates [goid 45735] [evidence IEA]		
Homo sapiens	RefSeq	NM_013239.3	ILMN_5735	PPP2R3B	NM_013239.3	NM_013239.3		28227	41349492	NM_013239.3	PPP2R3B	NP_037371.2	ILMN_1689720	0003170494	I	1149	CTACGTCATCTACTGCAAGTTCTGGGAGCTGGACACGGACCACGACCTGC	Y	-	306289-306338	Xp22.33f,Yp11.32c	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B'', beta (PPP2R3B), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10629059] [evidence TAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10629059] [evidence TAS]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 10629059] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PR48; NY-REN-8; PPP2R3LY; PPP2R3L	PR48; NY-REN-8; PPP2R3LY; PPP2R3L
Homo sapiens	RefSeq	NM_199326.1	ILMN_5735	PPP2R3B	NM_013239.3	NM_013239.3		28227	41349492	NM_013239.3	PPP2R3B	NP_037371.2	ILMN_1712257	0003440315	A	1694	AGCTCTCGGACTGGGAGAAGTACGCGGCCGAGGAGTACGACATCCTGGTG	Y	-	299373-299422	Xp22.33f,Yp11.32c	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B'', beta (PPP2R3B), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10629059] [evidence TAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10629059] [evidence TAS]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 10629059] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PR48; NY-REN-8; PPP2R3LY; PPP2R3L	PR48; NY-REN-8; PPP2R3LY; PPP2R3L
Homo sapiens	RefSeq	NM_212551.2	ILMN_5871	LYSMD1	NM_212551.3	NM_212551.3		388695	142384845	NM_212551.3	LYSMD1	NP_997716.1	ILMN_1792931	0003390273	S	2122	GGGGTTTGAAGAGGAAGCCAGTTGTGGGAGTCTCTTTGTTACACCCCCTC	1	-	149399096-149399145	1q21.2d	Homo sapiens LysM, putative peptidoglycan-binding, domain containing 1 (LYSMD1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		RP11-68I18.5; SB145; MGC35223	RP11-68I18.5; SB145; MGC35223
Homo sapiens	RefSeq	NM_031924.3	ILMN_20992	RSPH3	NM_031924.3	NM_031924.3		83861	31543558	NM_031924.3	RSPH3	NP_114130.3	ILMN_1788223	0002650678	S	1903	CAACAGCCAAGTCAGCAAGCAATCAGGTAATGATGTGCGAGTCCCCTCAG	6	-	159318478-159318527	6q25.3e	Homo sapiens radial spoke 3 homolog (Chlamydomonas) (RSPH3), mRNA.				dJ111C20.1; RSHL2; RSP3	dJ111C20.1; RSHL2; RSP3
Homo sapiens	RefSeq	XM_934296.1	ILMN_45220	LOC653352	XM_934296.1	XM_934296.1		653352	89040108	XM_934296.1	LOC653352	XP_939389.1	ILMN_1802139	0000160520	I	1836	GATGGGAGGAAGAAGCCTTAGAGGTGGGGAGGGGCTGATCTGTCATCTTC	16	-	28310982-28311031		PREDICTED: Homo sapiens similar to eukaryotic translation initiation factor 3, subunit 8, transcript variant 7 (LOC653352), mRNA.					
Homo sapiens	RefSeq	NR_000033.2	ILMN_21596	ESRRAP2	NR_000033.2	NR_000033.2		144832	83582790	NR_000033.2	ESRRAP2		ILMN_2046896	0004210647	S	2449	CACGGACATGGGGCAAGCCAGGGCCCAGAGCCTTTGGCTGTACAGAGACT	13	+	20734361-20734410	13q12.11b	Homo sapiens estrogen-related receptor alpha pseudogene 2 (ESRRAP2) on chromosome 13.				ESTRRA	ESTRRA
Homo sapiens	RefSeq	NM_144977.1	ILMN_24642	DENND1B	NM_144977.2	NM_144977.2		163486	141803408	NM_144977.2	DENND1B	NP_659414.1	ILMN_1763654	0003390725	S	2043	GCACGATTGTAGTGGTGTATAGTCTTGACTTGCAGAGCATTTTGCTTGAG	1	-	195788112-195788161	1q31.3c	Homo sapiens DENN/MADD domain containing 1B (DENND1B), mRNA.				RP11-53I24.2; MGC27044; FAM31B	RP11-53I24.2; MGC27044; FAM31B
Homo sapiens	Unigene	Hs.543617	ILMN_107180	HS.543617	Hs.543617		Hs.543617		3213982	AI004472			ILMN_1897230	0006100170	S	169	GATAAGGGAGCTGGGAATAGCTGGCAGAAGTGTGTTCAAAGGTAAGAAAG	4	+	53936385-53936434		ot56f09.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1620809 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003583.2	ILMN_3688	DYRK2	NM_003583.2	NM_003583.2		8445	5922002	NM_003583.2	DYRK2	NP_003574.1	ILMN_2374249	0006330553	A	1818	GCTCACGTCCCCTGATGCTGGTAACCTGAAAGATACGACATTGCTGAGCC	12	+	66338761-66338810	12q15a	Homo sapiens dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 (DYRK2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17349958] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17349958] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 11311121] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [pmid 17349958] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen [goid 45725] [pmid 11311121] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9748265] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11311121] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [pmid 9748265] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11311121] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 9748265] [evidence IDA]		
Homo sapiens	RefSeq	NM_003583.2	ILMN_3688	DYRK2	NM_003583.2	NM_003583.2		8445	5922002	NM_003583.2	DYRK2	NP_003574.1	ILMN_2374244	0002100743	A	3382	AGTACTTAAAAGCGTGGTCCCCAGTGAGGCCAAGAAAGTTTCCGGTTAAG	12	+	66340325-66340374	12q15a	Homo sapiens dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 (DYRK2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17349958] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17349958] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 11311121] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [pmid 17349958] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen [goid 45725] [pmid 11311121] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9748265] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11311121] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [pmid 9748265] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11311121] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 9748265] [evidence IDA]		
Homo sapiens	RefSeq	NM_180989.3	ILMN_180407	GPR180	NM_180989.4	NM_180989.4		160897	90577175	NM_180989.4	GPR180	NP_851320.1	ILMN_1738712	0003180563	S	3026	ATGTCTCGCTAATAACCCCAGCTATTGTCTGTTGTGTTCAGCTGAGATGC	13	+	94079051-94079100	13q32.1a	Homo sapiens G protein-coupled receptor 180 (GPR180), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			ITR	
Homo sapiens	RefSeq	XM_927041.1	ILMN_40492	LOC653260	XM_927041.1	XM_927041.1		653260	88965410	XM_927041.1	LOC653260	XP_932134.1	ILMN_1683162	0001980577	S	121	CTCCCACTTGTGGCTGTGAGTGGGTGGAACACATTTAAACAGGGGAACAA	3	+	100879648-100879697		PREDICTED: Homo sapiens similar to Smooth muscle cell-expressed and macrophage conditioned medium-induced protein 64 (Smag-64) (LOC653260), mRNA.					
Homo sapiens	RefSeq	NM_139244.2	ILMN_3767	STXBP5	NM_139244.2	NM_139244.2		134957	31652246	NM_139244.2	STXBP5	NP_640337.2	ILMN_1684402	0007550022	S	4544	GCTCATCATTCTGGGAGTTTCCATGTAGTGGCTATGCAGTGTGGAAAGTG	6	+	147748310-147748359	6q24.3b	Homo sapiens syntaxin binding protein 5 (tomosyn) (STXBP5), mRNA.	A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with the SNAP receptor syntaxin-1 [goid 17075] [evidence IEA]	LLGL3; MGC141968; FLJ30922; LGL3; MGC141942; Nbla04300	LLGL3; MGC141968; FLJ30922; LGL3; MGC141942; Nbla04300
Homo sapiens	RefSeq	XM_933056.1	ILMN_40453	LOC645687	XM_933056.1	XM_933056.1		645687	89037353	XM_933056.1	LOC645687	XP_938149.1	ILMN_1804804	0000010735	S	153	GGTGATGGTGAGAGGGTCACAAGGTAGACAACAAGGAAGTCAGAGTCCTG	14	-	55339788-55339837	14q22.3b	PREDICTED: Homo sapiens hypothetical protein LOC645687 (LOC645687), mRNA.					
Homo sapiens	RefSeq	NM_014272.2	ILMN_172195	LOC400406	XR_017358.1	XR_017358.1		400406	113425331	XR_017358.1	LOC400406		ILMN_1772239	0001660228	S	3690	AGTGTGTCAACACCCAGACAGGGCTGCCCGAGGAAGACAGTGACCAGTGT	15	+	76069449-76069498	15q24.3b	PREDICTED: Homo sapiens similar to ADAM metallopeptidase with thrombospondin type 1 motif, 7 preproprotein (LOC400406), mRNA.					DKFZp434H204; ADAM-TS7
Homo sapiens	RefSeq	NR_002207.1	ILMN_16686	CSNK2A1P	NR_002207.1	NR_002207.1		283106	57528062	NR_002207.1	CSNK2A1P		ILMN_2109526	0006100255	S	1269	CGCCCGTCAGCAGCGCCAATGTGATGTCAGGGATTTCTTCAGTGCCAACT	11	-	11373586-11373635	11p15.3d	Homo sapiens casein kinase 2, alpha 1 polypeptide pseudogene (CSNK2A1P), non-coding RNA.					
Homo sapiens	RefSeq	NR_002207.1	ILMN_16686	CSNK2A1P	NR_002207.1	NR_002207.1		283106	57528062	NR_002207.1	CSNK2A1P		ILMN_1746375	0004810709	S	1304	TCTTCAGTGCCAACTCCTTCACCCCTTGGACCTCTGGCAGGCTCACCAGT	11	-	11373551-11373600	11p15.3d	Homo sapiens casein kinase 2, alpha 1 polypeptide pseudogene (CSNK2A1P), non-coding RNA.					
Homo sapiens	RefSeq	XM_936358.1	ILMN_33561	LOC619207	NR_002934.2	NR_002934.2		619207	141801873	NR_002934.2	LOC619207		ILMN_1753973	0006960520	S	7	TGACCTCCGCCATTGCCCCAGCTAAGCAGCGAGAGCTTGCTGAAGCCCAG	10	+	135117428-135117477	10q26.3f	Homo sapiens scavenger receptor protein family member (LOC619207), non-coding RNA.					
Homo sapiens	RefSeq	NM_207458.1	ILMN_26183	FLJ46026	NM_207458.1	NM_207458.1		400627	46409539	NM_207458.1	FLJ46026	NP_997341.1	ILMN_1684193	0006650609	S	2704	TGGCCTACGTCACAAGATGGCTCTTGCCACACAGTACGCTCCCTGATGTG	17	-	76555013-76555062	17q25.3e	Homo sapiens FLJ46026 protein (FLJ46026), mRNA.					
Homo sapiens	RefSeq	XM_001714829.1	ILMN_346567	LOC100129098	XM_001714829.1	XM_001714829.1		100129098	169172507	XM_001714829.1	LOC100129098	XP_001714881.1	ILMN_3266304	0004880228	M	2213	GCCCAGTAGGGGGAAGAAAAAAGGAATTGATTCTGACCTGTGGCACTGGG				8q11.23d	PREDICTED: Homo sapiens hypothetical LOC100129098 (LOC100129098), mRNA.					
Homo sapiens	RefSeq	NM_001008777.1	ILMN_8837	FBXO47	NM_001008777.1	NM_001008777.1		494188	56912188	NM_001008777.1	FBXO47	NP_001008777.1	ILMN_1797542	0001770458	S	1497	GCTCAGGCTAACTTCCATAAGGAGGTCCTGTATTTGACCATGAATACTCC	17	-	34346966-34347015	17q12c	Homo sapiens F-box protein 47 (FBXO47), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]			
Homo sapiens	RefSeq	NM_174932.1	ILMN_162281	BPIL2	NM_174932.1	NM_174932.1		254240	28372550	NM_174932.1	BPIL2	NP_777592.1	ILMN_1708152	0004010392	S	1157	GTACCAGTGTTGGCCTGGTTATTTTGGGACAAAGACTGGTCTGCTCCTTG	22	-	31157344-31157393	22q12.3a	Homo sapiens bactericidal/permeability-increasing protein-like 2 (BPIL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]		Interacting selectively with lipopolysaccharide [goid 1530] [pmid 12185532] [evidence NAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 12185532] [evidence NAS]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Homo sapiens	RefSeq	NM_182898.2	ILMN_19489	CREB5	NM_182898.2	NM_182898.2		9586	59938769	NM_182898.2	CREB5	NP_878901.2	ILMN_1731714	0006200577	A	8163	GAGGAAGTCCCAAAAAGGTGCTGTCACTTTAAGTTCTGGACTTGGGGTTC	7	+	28830575-28830624	7p15.1d	Homo sapiens cAMP responsive element binding protein 5 (CREB5), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8378084] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8378084] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 8378084] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8378084] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	CRE-BPA	CRE-BPA
Homo sapiens	RefSeq	NM_182898.2	ILMN_19489	CREB5	NM_182898.2	NM_182898.2		9586	59938769	NM_182898.2	CREB5	NP_878901.2	ILMN_1688573	0001170537	I	141	GAGACCGAGGGAGGTACCAGAGTCTAGGAGGTACCTCTGGGTTGCAGAAG	7	+	28418809-28418858	7p15.1d	Homo sapiens cAMP responsive element binding protein 5 (CREB5), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8378084] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8378084] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 8378084] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8378084] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	CRE-BPA	CRE-BPA
Homo sapiens	RefSeq	NM_000014.4	ILMN_8023	A2M	NM_000014.4	NM_000014.4		2	66932946	NM_000014.4	A2M	NP_000005.2	ILMN_1745607	0002370438	S	4524	CTTGGAAATGCTTGAAGACCACAAGGCTGAAAAGTGCTTTGCTGGAGTCC	12	-	9220383-9220418:9220419-9220432	12p13.31a	Homo sapiens alpha-2-macroglobulin (A2M), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 59727] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 59727] [evidence EXP]	The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence NAS]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA];  [goid 17114] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 11435418] [evidence IPI]; Interacting selectively with interleukin-8 [goid 19959] [pmid 10880251] [evidence IPI]; Interacting selectively with interleukin-1 [goid 19966] [pmid 9714181] [evidence IDA]; Interacting selectively with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages [goid 43120] [pmid 9714181] [evidence IDA]	alpha 2M; CPAMD5; S863-7; FWP007; DKFZp779B086	alpha 2M; CPAMD5; S863-7; FWP007; DKFZp779B086
Homo sapiens	Unigene	Hs.584678	ILMN_136859	HS.584678	Hs.584678		Hs.584678		19726211	BQ001311			ILMN_1870609	0002340221	S	395	TCGAGTTCTCCGTAAGCTCTCTCTCCAGGGTGTGGGGCATTGTGACACGC	X	-	131629998-131630047		UI-H-DH1-awp-m-14-0-UI.s1 NCI_CGAP_DH1 Homo sapiens cDNA clone IMAGE:5892661 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005417.3	ILMN_6831	SRC	NM_005417.3	NM_005417.3		6714	38202215	NM_005417.3	SRC	NP_005408.1	ILMN_1778253	0002260435	I	64	CAAGCAGCCCCTTTCCCCTCTAGCCTCAGTTTATCACCGCAAGAGCTACC	20	+	35406565-35406614	20q11.23b	Homo sapiens v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian) (SRC), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11124251] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10858437] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12506110] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9028946] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11124251] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12907686] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15574420] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8845374] [evidence EXP]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 17848177] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [pmid 9924018] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 9020193] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9020193] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8681387] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9763511] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 8070403] [evidence IPI]	SRC1; p60-Src; c-SRC; ASV	SRC1; p60-Src; c-SRC; ASV
Homo sapiens	RefSeq	XM_937363.1	ILMN_168735	SMYD2	XM_001127274.1	XM_001127274.1		56950	113412602	XM_001127274.1	SMYD2	XP_001127274.1	ILMN_1670503	0007040072	I	2823	GTTCTTCACCAGTCCCACTGCGTGGAGCTAACTGCCATAAACAGTTTGCT				1q41a	PREDICTED: Homo sapiens SET and MYND domain containing 2 (SMYD2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_006406.1	ILMN_22146	PRDX4	NM_006406.1	NM_006406.1		10549	5453548	NM_006406.1	PRDX4	NP_006397.1	ILMN_2222234	0002650253	S	775	CTGCCCTGCTGGCTGGAAACCTGGTAGTGAAACAATAATCCCAGATCCAG	X	+	23611710-23611743:23614323-23614338	Xp22.11a	Homo sapiens peroxiredoxin 4 (PRDX4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of introducing a phosphate group into an I-kappaB protein [goid 7252] [pmid 9388242] [evidence TAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: thioredoxin + H2O2 = thioredoxin disulfide + H2O [goid 8379] [pmid 9388242] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	PRX-4; AOE37-2	PRX-4; AOE37-2
Homo sapiens	RefSeq	XM_929139.1	ILMN_168270	XGPY2	NR_003254.1	NR_003254.1		100132596	116875816	NR_003254.1	XGPY2		ILMN_1781222	0001030487	S	133	CTGAGGCAACGTCCTTGAACTGATGCTTACGGAGGGGATGGTTGAGGATG	Y	+	2642807-2642856	Yp11.31b	Homo sapiens Xg pseudogene, Y-linked 2 (XGPY2), non-coding RNA.				XG; XGPY	
Homo sapiens	RefSeq	NR_003254.1	ILMN_168270	XGPY2	NR_003254.1	NR_003254.1		100132596	116875816	NR_003254.1	XGPY2		ILMN_2058570	0005050202	S	73	GATGACCCTGAACCCACCAAGAAGCCAAACTCAGGTGAGTGTCTCTTCAG	Y	+	2638623-2638632:2642757-2642796	Yp11.31b	Homo sapiens Xg pseudogene, Y-linked 2 (XGPY2), non-coding RNA.				XG; XGPY	XG; XGPY
Homo sapiens	RefSeq	XR_042334.1	ILMN_346034	LOC440225	XR_042334.1	XR_042334.1		440225	169208441	XR_042334.1	LOC440225		ILMN_3250491	0005220487	I	1638	CATTACTCAGCATCAGAGAATTCACACTGGAGGGAAACCTTTCAAGTGTC	15	-	19371035-19371084	15q11.2a-q11.2b	PREDICTED: Homo sapiens misc_RNA (LOC440225), miscRNA.					
Homo sapiens	RefSeq	NM_178332.1	ILMN_5315	GNRH2	NM_178332.1	NM_178332.1		2797	30581151	NM_178332.1	GNRH2	NP_847902.1	ILMN_1697845	0004880678	A	12	TGAAGGAGCCATCTCATCCACAGCTCTTCCTTGAGCAGCCATGGCCAGCT	20	+	2972279-2972311:2973054-2973060:2973061-2973070	20p13c	Homo sapiens gonadotropin-releasing hormone 2 (GNRH2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9419371] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9419371] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 9419371] [evidence TAS]	GnRH-II; LH-RHII	GnRH-II; LH-RHII
Homo sapiens	RefSeq	XM_932072.1	ILMN_163479	LOC728844	XM_001133058.1	XM_001133058.1		728844	113423772	XM_001133058.1	LOC728844	XP_001133058.1	ILMN_1676848	0004850161	S	203	GCTCAGACACTCTACAGCTGAGAGTAGACACTTGTGGGAGGAGTCTGCTA				12q13.13f	PREDICTED: Homo sapiens hypothetical LOC728844 (LOC728844), mRNA.					
Homo sapiens	Unigene	Hs.541710	ILMN_105884	HS.541710	Hs.541710		Hs.541710		34192096	BC030101			ILMN_1917316	0006840386	S	617	GCTCACTTACAAAAATAGGATGATGAAGTTTAGAGCATAAGGCAGGCTTC	2	-	158095912-158095961		Homo sapiens cDNA clone IMAGE:4796641					
Homo sapiens	Unigene	Hs.580451	ILMN_132632	HS.580451	Hs.580451		Hs.580451		83139258	DB082485			ILMN_1819503	0002750131	S	184	TGGAAAGCATCACAAGAGAAGTGTGTGGCCCTCGCCTGTGGAGGTGAAGC	2	+	732671-732720		DB082485 TESTI4 Homo sapiens cDNA clone TESTI4028844 5, mRNA sequence					
Homo sapiens	RefSeq	NM_032792.2	ILMN_30296	ZBTB45	NM_032792.2	NM_032792.2		84878	21314759	NM_032792.2	ZBTB45	NP_116181.1	ILMN_1661484	0002900255	S	2284	ATATGGGGGCTGGGCCTCGGGACTCTCGCTCTAATAAAGGACTGTAGGCC	19	-	63716727-63716776	19q13.43c	Homo sapiens zinc finger and BTB domain containing 45 (ZBTB45), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14486; DKFZp547H249; ZNF499	FLJ14486; DKFZp547H249; ZNF499
Homo sapiens	RefSeq	XR_039558.1	ILMN_335944	LOC100130750	XR_039558.1	XR_039558.1		100130750	169180122	XR_039558.1	LOC100130750		ILMN_3177691	0004010541	A	304	CCTAAGGCTGCATGTAGGGAATTTCTCCTGGGGCTCAGCGTTGTATTTGC	9	-	34214406-34214455	9p13.3c	PREDICTED: Homo sapiens misc_RNA (LOC100130750), miscRNA.					
Homo sapiens	RefSeq	XR_039558.1	ILMN_335944	LOC100130750	XR_039558.1	XR_039558.1		100130750	169180122	XR_039558.1	LOC100130750		ILMN_3254152	0002750619	M	444	GACAGCACACCATACTCATCGACAGCACACCGTATGGACAGTGGTACGAG	9	-	34214266-34214315	9p13.3c	PREDICTED: Homo sapiens misc_RNA (LOC100130750), miscRNA.					
Homo sapiens	RefSeq	XM_001132552.1	ILMN_178559	LOC391142	XM_001132552.1	XM_001132552.1		391142	113411541	XM_001132552.1	LOC391142	XP_001132552.1	ILMN_3207139	0000990021	A	609	TGGCTCAGGCACAGAAACGAAGCAGCCACATGCAAAGGTGTGGGTATTCC	1	+	179189354-179189382:179189383-179189403	1q25.3a	PREDICTED: Homo sapiens hypothetical LOC391142 (LOC391142), mRNA.					
Homo sapiens	RefSeq	NM_144507.1	ILMN_28736	KLK8	NM_007196.2	NM_007196.2		11202	21464132	NM_007196.2	KLK8	NP_009127.1	ILMN_1735700	0003840010	A	132	GTCCGAATCAGTAGGTGACCCCGCCCCTGGATTCTGGAAGACCTCACCAT	19	-	56196233-56196235:56196236-56196243:56196600-56196638	19q13.33d	Homo sapiens kallikrein-related peptidase 8 (KLK8), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence ISS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons [goid 31642] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons [goid 31642] [evidence ISS]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IEA]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of axon regeneration [goid 48681] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon regeneration [goid 48681] [evidence ISS]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence IEA]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [evidence ISS]; Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50807] [evidence IEA]; Any process that modulates the physical form of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50807] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 16337200] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	NRPN; NP; HNP; TADG14; PRSS19	HNP; TADG14; NRPN; NP; PRSS19
Homo sapiens	RefSeq	NM_144667.1	ILMN_9792	C12ORF67	NM_144667.1	NM_144667.1		144360	21389550	NM_144667.1	C12orf67	NP_653268.1	ILMN_1789323	0001780735	S	831	GTGGACCACACTCTTAGAGGGGGCTGTGGCTTTTATAGGAGAAACATGGG	12	-	24627489-24627538	12p12.1b	Homo sapiens chromosome 12 open reading frame 67 (C12orf67), mRNA.				MGC129798; MGC129799	MGC129798; MGC129799
Homo sapiens	RefSeq	XM_928480.1	ILMN_41266	LOC645448	XM_928480.1	XM_928480.1		645448	89029858	XM_928480.1	LOC645448	XP_933573.1	ILMN_1651388	0007510246	S	1	ATGGAAGCTGGTAGCCCATTTTTGCTCAGCTCTGATGGCCAGAATGTCGT	9	-	83865415-83865464	9q21.32a	PREDICTED: Homo sapiens similar to chromosome 9 open reading frame 36 (LOC645448), mRNA.					
Homo sapiens	RefSeq	XM_935989.1	ILMN_45844	LOC646588	XM_935989.2	XM_935989.2		646588	113419391	XM_935989.2	LOC646588	XP_941082.1	ILMN_1810582	0004120612	S	813	GCAAGTAGGACAGAAAGGTGGCTTGAAAGTCAATCATGTGAGAATTCCAG				7p15.2c	PREDICTED: Homo sapiens hypothetical protein LOC646588 (LOC646588), mRNA.					
Homo sapiens	Unigene	Hs.26651	ILMN_72051	HS.26651	Hs.26651		Hs.26651		13741797	BG215776			ILMN_1899638	0004490047	S	192	GCAGGCAGAAGACTGCTATGAGAGCACTTAGGACCCAAGCGACATCAGCC	5	-	34687332-34687381		RST35453 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_020673.2	ILMN_27304	RAB22A	NM_020673.2	NM_020673.2		57403	34577103	NM_020673.2	RAB22A	NP_065724.1	ILMN_1786976	0007050136	S	8278	GCCTGGTTACCTGTCATGGAATGCTGCAGTGGTGGTTTGCCAAGCTTCTG	20	+	56375596-56375645	20q13.32a	Homo sapiens RAB22A, member RAS oncogene family (RAB22A), mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11870209] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11870209] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 11870209] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [pmid 11870209] [evidence IEP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 11870209] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11870209] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14613930] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 11870209] [evidence TAS]	MGC16770	MGC16770
Homo sapiens	RefSeq	XM_940101.1	ILMN_166694	SERPINA11	NM_001080451.1	NM_001080451.1		256394	122937296	NM_001080451.1	SERPINA11	NP_001073920.1	ILMN_1791095	0006180475	A	1221	GTCAGACCCACATGCCCACTTCAACAGGCCTTTCCTCTTGCTCCTTTGGG	14	-	94909001-94909050	14q32.13a	Homo sapiens serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 (SERPINA11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide [goid 16812] [evidence IEA]		
Homo sapiens	RefSeq	NM_001080451.1	ILMN_166694	SERPINA11	NM_001080451.1	NM_001080451.1		256394	122937296	NM_001080451.1	SERPINA11	NP_001073920.1	ILMN_2316955	0000050279	A	1121	CCAAGGTGTCACACAAGGCGATGGTGGACATGAGTGAGAAGGGGACCGAG	14	-	94909101-94909146:94909415-94909418	14q32.13a	Homo sapiens serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11 (SERPINA11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide [goid 16812] [evidence IEA]		
Homo sapiens	RefSeq	NM_006823.2	ILMN_172657	PKIA	NM_006823.2	NM_006823.2		5569	32483387	NM_006823.2	PKIA	NP_006814.1	ILMN_1674031	0003190601	I	372	CCTGACTTTCTGAGAAGCCCTGGTTTCCCCAAAGAAGTGATTTCTGATAG	8	+	79485049-79485098	8q21.12a	Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor alpha (PKIA), transcript variant 6, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [pmid 1710219] [evidence TAS]	PRKACN1	PRKACN1
Homo sapiens	RefSeq	NM_006823.2	ILMN_172657	PKIA	NM_006823.2	NM_006823.2		5569	32483387	NM_006823.2	PKIA	NP_006814.1	ILMN_1762262	0005910463	A	1824	CTCCTTGCAATCATGTGGACACCAATCACAAAAGTAAAGCCCTGGTGTTG	8	+	79515125-79515174	8q21.12a	Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor alpha (PKIA), transcript variant 6, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [pmid 1710219] [evidence TAS]	PRKACN1	PRKACN1
Homo sapiens	RefSeq	XM_938546.1	ILMN_32370	LOC649466	XM_938546.1	XM_938546.1		649466	88945886	XM_938546.1	LOC649466	XP_943639.1	ILMN_1684693	0001580220	S	181	ATTTACGGGAAAACAGAGAGGATGAAGGCCTATCTAAAGAGCGCAGAAGG					PREDICTED: Homo sapiens similar to KARP-1-binding protein (LOC649466), mRNA.					
Homo sapiens	RefSeq	XM_928274.1	ILMN_33706	LOC653589	XM_928274.1	XM_928274.1		653589	88953633	XM_928274.1	LOC653589	XP_933367.1	ILMN_1777680	0007050377	S	521	AACTATTTAGATTTGATGCTGAGATAGAGCATGGATGTGGTCAGCCAGTG	2	-	111008622-111008649:111008810-111008831		PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 1 (LOC653589), mRNA.					
Homo sapiens	RefSeq	NM_178148.1	ILMN_17910	SLC35B2	NM_178148.1	NM_178148.1		347734	30026033	NM_178148.1	SLC35B2	NP_835361.1	ILMN_1789001	0001580402	S	1708	GTTACTCTTCCCACAAGTTCCCTTAAGTCTTGCCCTAGCTGTGCTCTGCC	6	-	44330087-44330136	6p21.1b	Homo sapiens solute carrier family 35, member B2 (SLC35B2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12716889] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 12716889] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12716889] [evidence NAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; The directed movement of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride synthesized from adenosine 5'-phosphosulfate, into, out of, within or between cells [goid 46963] [pmid 12716889] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Catalysis of the transfer of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride synthesized from adenosine 5'-phosphosulfatefrom one side of a membrane to the other [goid 46964] [pmid 12716889] [evidence IDA]	UGTrel4; SLL; PAPST1	UGTrel4; SLL; PAPST1
Homo sapiens	Unigene	Hs.126768	ILMN_76318	HS.126768	Hs.126768		Hs.126768		50484257	CR603450			ILMN_1893511	0004200463	S	869	CCGATGTGCAGGCCTCACTGGAAGAGCTTCAAGAGGAGTTTGTGAAACTC	5	-	180615052-180615101		full-length cDNA clone CS0DI004YB08 of Placenta Cot 25-normalized of Homo sapiens (human)					
Homo sapiens	Unigene	Hs.527387	ILMN_100891	HS.527387	Hs.527387		Hs.527387		44840273	CK823348			ILMN_1893798	0003180762	S	514	TGGGGGAAAAGAGGGTAGACTTATGGGGGTCACGTGTTGGACTCCTGTTG	7	+	148268808-148268857		ij28g12.x5 Melton Normalized Human Islet 4 N4-HIS 1 Homo sapiens cDNA clone IMAGE:6136150 3, mRNA sequence					
Homo sapiens	RefSeq	NM_033048.3	ILMN_21577	CPXCR1	NM_033048.4	NM_033048.4		53336	153792481	NM_033048.4	CPXCR1	NP_149037.3	ILMN_1749653	0002570196	S	854	CCTTCGAGGGTGCACTACTACCGTCCCCTCACTGAGAGAATGACATCAGG	X	+	87895666-87895715	Xq21.31b	Homo sapiens CPX chromosome region, candidate 1 (CPXCR1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	XM_001732848.1	ILMN_347494	LOC728701	XM_001732848.1	XM_001732848.1		728701	169178768	XM_001732848.1	LOC728701	XP_001732900.1	ILMN_3227291	0003450341	A	780	GGCAAGAAGGCTCTGCTTTGCCCCGCCCTGGCACTAGAGCCCCGGCAGCC				9q12h	PREDICTED: Homo sapiens hypothetical LOC728701 (LOC728701), mRNA.					
Homo sapiens	RefSeq	NM_198406.1	ILMN_22170	PAQR6	NM_198406.1	NM_198406.1		79957	41282030	NM_198406.1	PAQR6	NP_940798.1	ILMN_2330382	0005870397	A	1502	TACCCTGAATGCTTCTTGCTAACCAGGCCGAGAGGCCACACACTTGCCCC	1	-	156213473-156213522	1q22d	Homo sapiens progestin and adipoQ receptor family member VI (PAQR6), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ22672	FLJ22672
Homo sapiens	RefSeq	NM_032910.2	ILMN_171360	C21ORF119	NM_032910.2	NM_032910.2		84996	50284697	NM_032910.2	C21orf119	NP_116299.1	ILMN_1728403	0003440132	S	488	GTAGCAGCCTGTCACTCCAGACTGTCCTCCACCCCAGACTTCCGCAAACT	21	+	32687800-32687849	21q22.11b	Homo sapiens chromosome 21 open reading frame 119 (C21orf119), mRNA.				PRED84; MGC14136	PRED84; MGC14136
Homo sapiens	RefSeq	XR_037259.1	ILMN_350786	LOC100133937	XR_037259.1	XR_037259.1		100133937	169173325	XR_037259.1	LOC100133937		ILMN_3247960	0005700368	S	591	GAGGCCAAGCACATTGCGGAAAAGGCTGACCATTCTGAAAAGGAGGACAA					PREDICTED: Homo sapiens misc_RNA (LOC100133937), miscRNA.					
Homo sapiens	RefSeq	XM_926048.1	ILMN_43676	LOC642564	XM_926048.1	XM_926048.1		642564	89028310	XM_926048.1	LOC642564	XP_931141.1	ILMN_1683460	0004210450	S	61	GACACGGCATTCTCCTACATAAAACATTATAATTTTCCCACTACTCCAAA	8	+	144912740-144912789		PREDICTED: Homo sapiens hypothetical protein LOC642564 (LOC642564), mRNA.					
Homo sapiens	RefSeq	NM_024997.2	ILMN_24845	ATF7IP2	NM_024997.2	NM_024997.2		80063	38569429	NM_024997.2	ATF7IP2	NP_079273.2	ILMN_1804445	0002480075	S	3284	GGCCACCATCACAATACTAAGGGGCTCAGATGTGTCTTGTGCCCACCTCT	16	+	10484683-10484732	16p13.13d	Homo sapiens activating transcription factor 7 interacting protein 2 (ATF7IP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		MCAF2; FLJ12668	MCAF2; FLJ12668
Homo sapiens	RefSeq	NM_020646.1	ILMN_16261	ASCL3	NM_020646.1	NM_020646.1		56676	10190679	NM_020646.1	ASCL3	NP_065697.1	ILMN_1695353	0006770500	S	342	CACCCGGAAAAGGAATGAGCGGGAAAGGCAGCGGGTGAAATGTGTCAATG	11	-	8959377-8959426	11p15.4a	Homo sapiens achaete-scute complex homolog 3 (Drosophila) (ASCL3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	SGN1	SGN1
Homo sapiens	Unigene	Hs.559121	ILMN_113560	HS.559121	Hs.559121		Hs.559121		27880605	BX116710			ILMN_1912834	0005490170	S	363	CTCCCAAGGAGGCAGCAGAAACTGGGGTAATCACAACGGTCAACAGCAGC	1	+	110762395-110762444		BX116710 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998D133559, mRNA sequence					
Homo sapiens	RefSeq	NM_021992.2	ILMN_1117	TMSB15A	NM_021992.2	NM_021992.2		11013	72255577	NM_021992.2	TMSB15A	NP_068832.1	ILMN_1681737	0001740291	S	358	GGCGTCTTCGGATATCTTCTCACCTATGTTCCCTGGCTAAGAAGTCAGAG	X	-	101768868-101768917	Xq22.1e	Homo sapiens thymosin beta 15a (TMSB15A), mRNA.				Tb15; TMSNB; TbNB	TbNB; Tb15; TMSNB
Homo sapiens	RefSeq	NM_014428.1	ILMN_12372	TJP3	NM_014428.1	NM_014428.1		27134	10092690	NM_014428.1	TJP3	NP_055243.1	ILMN_1659610	0003450524	S	2810	AGTCCTCCGATGAAGACGGCTATGACTGGGGTCCGGCCACTGACCTGTGA	19	+	3701633-3701682	19p13.3e	Homo sapiens tight junction protein 3 (zona occludens 3) (TJP3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ZO-3; MGC119546	ZO-3; MGC119546
Homo sapiens	RefSeq	XM_001726102.1	ILMN_349233	LOC100131733	XM_001726102.1	XM_001726102.1		100131733	169205490	XM_001726102.1	LOC100131733	XP_001726154.1	ILMN_3292155	0003450376	M	671	CCCTGGGTCATGATTTGAATTTTTCGATGTGGGGAAGGGAGGCCAACAGC				12q24.11a	PREDICTED: Homo sapiens hypothetical LOC100131733 (LOC100131733), mRNA.					
Homo sapiens	RefSeq	XM_939111.1	ILMN_40049	LOC650020	XM_939111.2	XM_939111.2		650020	113412667	XM_939111.2	LOC650020	XP_944204.1	ILMN_1758743	0000430397	S	1853	AGGACAACCTCTCCTTCACTCCACAGGTATGTGGGAGCCTCAGGTTCGCT					PREDICTED: Homo sapiens similar to RING finger protein 4 (LOC650020), mRNA.					
Homo sapiens	RefSeq	NM_015193.3	ILMN_28586	ARC	NM_015193.3	NM_015193.3		23237	56676395	NM_015193.3	ARC	NP_056008.1	ILMN_1711120	0000430674	S	2675	CAGACCACTCTGACAAGTCTTCAGCCCACACCCTGCCAGCCCCACAGATT	8	-	143692829-143692878	8q24.3e	Homo sapiens activity-regulated cytoskeleton-associated protein (ARC), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the endoderm over time, from its formation to the mature structure. The endoderm is the innermost germ layer that develops into the gastrointestinal tract, the lungs and associated tissues [goid 7492] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]		KIAA0278	KIAA0278
Homo sapiens	RefSeq	NM_145764.1	ILMN_13709	MGST1	NM_145764.1	NM_145764.1		4257	22035633	NM_145764.1	MGST1	NP_665707.1	ILMN_1687387	0003180674	I	1	GAATTCAAGTCCTAAAGCCTACAGTTTTGAATACTACTGAAATGACAAGT	12	+	16397618-16397667	12p12.3d	Homo sapiens microsomal glutathione S-transferase 1 (MGST1), transcript variant 1d, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 3372534] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GST12; MGST-I; MGC14525; MGST	GST12; MGST-I; MGC14525; MGST
Homo sapiens	RefSeq	NM_009587.2	ILMN_667	LGALS9	NM_009587.2	NM_009587.2		3965	102469529	NM_009587.2	LGALS9	NP_033665.1	ILMN_2412214	0000840431	A	938	GAGAATGCTGTGGTCCGCAACACCCAGATCGACAACTCCTGGGGGTCTGA	17	+	22998484-22998533	17q11.1c	Homo sapiens lectin, galactoside-binding, soluble, 9 (LGALS9), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with the aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides [goid 5534] [pmid 9045665] [evidence TAS]	MGC125973; MGC117375; ECALECTIN; HUAT; galectin-9; MGC125974	MGC125973; MGC117375; ECALECTIN; galectin-9; MGC125974
Homo sapiens	RefSeq	NM_009587.1	ILMN_667	LGALS9	NM_009587.2	NM_009587.2		3965	102469529	NM_009587.2	LGALS9	NP_033665.1	ILMN_1715760	0005090632	A	1407	TCCAGCTGCTGGAATCCTACCATCCCAGGAGGCAGGCACAGCCAGGGAGA	17	+	23000356-23000405	17q11.1c	Homo sapiens lectin, galactoside-binding, soluble, 9 (LGALS9), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with the aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides [goid 5534] [pmid 9045665] [evidence TAS]	MGC125973; MGC117375; ECALECTIN; HUAT; galectin-9; MGC125974	MGC125973; MGC117375; ECALECTIN; galectin-9; MGC125974
Homo sapiens	RefSeq	NM_198557.1	ILMN_871	RBM43	NM_198557.1	NM_198557.1		375287	38348393	NM_198557.1	RBM43	NP_940959.1	ILMN_1797379	0005560646	S	2257	GTGAGCCTGGCTACTGAAACTGCTTGCTGTAACCTGAGACCAGTTTTGTC	2	-	151814569-151814618	2q23.3b	Homo sapiens RNA binding motif protein 43 (RBM43), mRNA.				FLJ45645; C2orf38	FLJ45645; C2orf38
Homo sapiens	RefSeq	XM_001128558.2	ILMN_168984	LOC644914	XM_001128558.2	XM_001128558.2		644914	169166829	XM_001128558.2	LOC644914	XP_001128558.1	ILMN_3206343	0005080369	A	1	ACATACTTGGCTCTCCAACGCCAGCGCCGCCTCTCGCTCGCCGAGCTCCA				4q31.1d	PREDICTED: Homo sapiens similar to H3 histone, family 3B (LOC644914), mRNA.					
Homo sapiens	RefSeq	NR_029639.1	ILMN_388271	MIR200B	NR_029639.1	NR_029639.1		406984	262206358	NR_029639.1	MIR200B		ILMN_3308380	0004490327	S	29	GGGCAGCATTGGATGGAGTCAGGTCTCTAATACTGCCTGGTAATGATGAC				1p36.33b	Homo sapiens microRNA 200b (MIR200B), microRNA.					
Homo sapiens	RefSeq	NM_145342.1	ILMN_10484	MAP3K7IP2	NM_145342.1	NM_145342.1		23118	21735558	NM_145342.1	MAP3K7IP2	NP_663317.1	ILMN_1808322	0005290201	I	1883	GAGACCAGCTGGGGCAACATATGGAGACTCCGTCTCTACAGAAGGTTTTG	6	+	149742864-149742913	6q25.1a	Homo sapiens mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (MAP3K7IP2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9744859] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10066798] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12609980] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9162092] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17158449] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0733; TAB2; FLJ21885	KIAA0733; TAB2; FLJ21885
Homo sapiens	RefSeq	XM_497406.2	ILMN_38936	LOC441682	XM_497406.2	XM_497406.2		441682	89037306	XM_497406.2	LOC441682	XP_497406.2	ILMN_1723702	0000270040	S	167	TCAGCTCCAGGCCTAGCATAGTCCTTTATGGGGTACTGTCCAGCTTGCAG	14	-	34504499-34504548		PREDICTED: Homo sapiens hypothetical LOC441682 (LOC441682), mRNA.					
Homo sapiens	RefSeq	XM_931897.1	ILMN_32741	LOC653210	XM_931897.1	XM_931897.1		653210	89059670	XM_931897.1	LOC653210	XP_936990.1	ILMN_1651606	0000520270	I	41	ATGATTGGCCTCTCCAGCTCCTCCCCTCGGTGCTATCCTCTGGCCAAAGA	X	+	51949433-51949482		PREDICTED: Homo sapiens similar to melanoma antigen family D, 4 isoform 1, transcript variant 5 (LOC653210), mRNA.					
Homo sapiens	RefSeq	NR_031727.1	ILMN_388643	MIR1826	NR_031727.1	NR_031727.1		100302162	269847614	NR_031727.1	MIR1826		ILMN_3308718	0004060201	S	11	ACACTTCGAACGCAATTGCAGCCCGGGTTCCTCCCAGGGCTTTGCCTGTC					Homo sapiens microRNA 1826 (MIR1826), microRNA.					
Homo sapiens	RefSeq	NM_032018.4	ILMN_8800	C1ORF124	NM_032018.4	NM_032018.4		83932	58331104	NM_032018.4	C1orf124	NP_114407.3	ILMN_2371470	0001580102	A	1624	GCCATCCCAGGATGTGAGTGGGTCTGAAGATACATTCCCAAATAAACGAC	1	+	229555436-229555485	1q42.2a	Homo sapiens chromosome 1 open reading frame 124 (C1orf124), transcript variant 1, mRNA.	A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 11256614] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP547N043; PRO4323; DDDL1880; dJ876B10.3; RP5-876B10.3	DKFZP547N043; PRO4323; DDDL1880; dJ876B10.3; RP5-876B10.3
Homo sapiens	RefSeq	XM_001725235.1	ILMN_339707	LOC100131722	XM_001725235.1	XM_001725235.1		100131722	169166240	XM_001725235.1	LOC100131722	XP_001725287.1	ILMN_3281383	0003310100	M	92	TGCGCCGGAGGGTGGGTTTCTTGCAGGTCGGCCTTTCTTCTGGTCAGCCC	4	+	132883732-132883781	4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100131722 (LOC100131722), mRNA.					
Homo sapiens	RefSeq	XM_001725235.1	ILMN_339707	LOC100131722	XM_001725235.1	XM_001725235.1		100131722	169166240	XM_001725235.1	LOC100131722	XP_001725287.1	ILMN_3204878	0006290647	A	483	CAAGCATCTCTGTCACTCAAAAGCTGGCCTTCCTGGCCGAGTCACCCGTC	4	+	132884123-132884172	4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100131722 (LOC100131722), mRNA.					
Homo sapiens	RefSeq	NR_024523.1	ILMN_370589	LOC641367	NR_024523.1	NR_024523.1		641367	214830808	NR_024523.1	LOC641367		ILMN_3239625	0007150524	S	2392	AGCTACTTGGGTGGCTGGAGGATTGCTTGGGGTCAGGTATTGGAGGCTGC	19	+	21935938-21935987	19p12c	Homo sapiens cyclin Y-like pseudogene (LOC641367), non-coding RNA.					
Homo sapiens	RefSeq	NM_033317.2	ILMN_4042	DMKN	NM_001035516.1	NM_001035516.1		93099	78486557	NM_001035516.1	DMKN	NP_001030593.1	ILMN_1778319	0004810497	S	280	GCAATTTCTTGCAACCACCACCGAGGCCCCGAAAAGCACTGGTCGTCAGG	19	-	40680230-40680279	19q13.12a	Homo sapiens dermokine (DMKN), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]			ZD52F10; UNQ729	ZD52F10; UNQ729
Homo sapiens	RefSeq	NM_020841.4	ILMN_176676	OSBPL8	NM_020841.4	NM_020841.4		114882	51243030	NM_020841.4	OSBPL8	NP_065892.1	ILMN_2405078	0003170274	A	2866	GGCTATTCCTCCCCAGAACCTGACATTCAAGACTCCTCTGGAAGTGAAGC	12	-	76750507-76750508:76752486-76752533	12q21.2a	Homo sapiens oxysterol binding protein-like 8 (OSBPL8), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		MSTP120; ORP8; MST120; MGC126578; DKFZp686A11164; OSBP10; MGC133203	MSTP120; ORP8; MST120; MGC126578; DKFZp686A11164; OSBP10; MGC133203
Homo sapiens	RefSeq	XM_928393.1	ILMN_34041	LOC645351	XM_928393.1	XM_928393.1		645351	88986464	XM_928393.1	LOC645351	XP_933486.1	ILMN_1665333	0005260112	S	551	TCCGCCTTCCCCATTCCTTTATTGTATGTAAAGTAACTGGTATATGTGCA	5	+	173921803-173921852		PREDICTED: Homo sapiens similar to SMT3 suppressor of mif two 3 homolog 2 (LOC645351), mRNA.					
Homo sapiens	Unigene	Hs.197700	ILMN_81463	HS.197700	Hs.197700		Hs.197700		10810860	BF056964			ILMN_1890902	0007560768	S	165	CCTCCCTGTCTTCCTGCCACAGAGCCTGAGTAGATCAAAAGGCCAAGAGC	2	-	15700912-15700961		7k12g03.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:3444269 3, mRNA sequence					
Homo sapiens	RefSeq	NR_024360.1	ILMN_370473	LOC100192378	NR_024360.1	NR_024360.1		100192378	211938421	NR_024360.1	LOC100192378		ILMN_3238898	0005890307	S	1221	CATGCCTAATGATGACCTACTCAGCCCCTGCCAACATCATTCAATTACTC	8	-	77523553-77523602		Homo sapiens hypothetical LOC100192378 (LOC100192378), non-coding RNA.					
Homo sapiens	RefSeq	NM_020813.1	ILMN_1704	ZNF471	NM_020813.1	NM_020813.1		57573	32698737	NM_020813.1	ZNF471	NP_065864.1	ILMN_2191720	0004760598	S	4677	CATCACAGCGGCTGTCTCATGATTAAGGCTGTGTTCCCTTGTTGGTGAGG	19	+	61731792-61731841	19q13.43a	Homo sapiens zinc finger protein 471 (ZNF471), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC150657; KIAA1396; MGC150658; ERP1; Z1971	MGC150657; KIAA1396; MGC150658; ERP1; Z1971
Homo sapiens	RefSeq	XR_039634.1	ILMN_339829	LOC648771	XR_039634.1	XR_039634.1		648771	169216021	XR_039634.1	LOC648771		ILMN_3281563	0003390170	M	151	ACAGTGAAACTGACCATTCAGGACAGACAGGCCCAGATTGAGGTGGTGCC					PREDICTED: Homo sapiens misc_RNA (LOC648771), miscRNA.					
Homo sapiens	RefSeq	NM_181484.1	ILMN_23824	ZGPAT	NM_181484.1	NM_181484.1		84619	31563369	NM_181484.1	ZGPAT	NP_852149.1	ILMN_1699321	0006220326	I	1800	ATCTGAGCTCATTGGTCAAAGCCCGGGTCACCATGCACAATCCTCTGGCC	20	+	61836356-61836405	20q13.33e	Homo sapiens zinc finger, CCCH-type with G patch domain (ZGPAT), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZC3H9; ZC3HDC9; RP4-583P15.3; GPATC6; MGC44880; KIAA1847; GPATCH6	RP4-583P15.3; GPATC6; ZC3H9; ZC3HDC9; MGC44880; KIAA1847; GPATCH6
Homo sapiens	RefSeq	NM_138456.3	ILMN_182698	BATF2	NM_138456.3	NM_138456.3		116071	45238853	NM_138456.3	BATF2	NP_612465.3	ILMN_1690241	0004730059	S	1833	CAGGCCCTCATCACCCTCAGACCCCTCCTAAGCAGTTCCCTCATTGCTCT	11	-	64755674-64755723	11q13.1c	Homo sapiens basic leucine zipper transcription factor, ATF-like 2 (BATF2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC20410	MGC20410
Homo sapiens	RefSeq	NM_001176.1	ILMN_139155	ARHGDIG	NM_001176.1	NM_001176.1		398	4502224	NM_001176.1	ARHGDIG	NP_001167.1	ILMN_1711278	0006650653	S	1486	TGGGGGTACCCACAGGACTTGAGAACACCTGTGCCTCCCTGCTCGGCCAG	16	+	273569-273618	16p13.3f	Homo sapiens Rho GDP dissociation inhibitor (GDI) gamma (ARHGDIG), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 9113980] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 9113980] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 9113980] [evidence TAS]	Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [pmid 9113980] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding [goid 5094] [evidence IEA]		
Homo sapiens	RefSeq	NM_015417.2	ILMN_167220	SPEF1	NM_015417.4	NM_015417.4		25876	114687766	NM_015417.4	SPEF1	NP_056232.2	ILMN_1738418	0002000037	S	1433	AGGAAGGGGTGAGGCGTGGGATCGCCAGGAGTAGGGAGGACATCGACGAT	20	-	3758255-3758304	20p13b	Homo sapiens sperm flagellar 1 (SPEF1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SPEF1; C20orf28; SPEF1A; DKFZP434I114; CLAMP	DKFZP434I114
Homo sapiens	RefSeq	NM_017860.3	ILMN_22326	C1ORF56	NM_017860.3	NM_017860.3		54964	34147608	NM_017860.3	C1orf56	NP_060330.2	ILMN_1780268	0004150332	S	1476	CTTGCCTTCATGCTTGGCCCTCTCTCCTCAAAAGGGCAATGTTGGTACAA	1	+	149289943-149289992	1q21.2d	Homo sapiens chromosome 1 open reading frame 56 (C1orf56), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ20519; RP11-316M1.9	FLJ20519; RP11-316M1.9
Homo sapiens	RefSeq	NM_144676.1	ILMN_8281	TMED6	NM_144676.2	NM_144676.2		146456	142379175	NM_144676.2	TMED6	NP_653277.1	ILMN_1748899	0002900561	S	639	CTGGTGGTCGACAGCCCAGAGCCTTGTTATTATTCTTTCTGGGATCCTGC	16	-	69377377-69377426	16q22.1d	Homo sapiens transmembrane emp24 protein transport domain containing 6 (TMED6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		PRO34237; SPLL9146; MGC23911	PRO34237; SPLL9146; MGC23911
Homo sapiens	RefSeq	NR_030587.1	ILMN_388063	MIR450B	NR_030587.1	NR_030587.1		100126302	262206002	NR_030587.1	MIR450B		ILMN_3310935	0002710609	S	21	GTTCCTGAATATGTAATATAAGTGTATTGGGATCATTTTGCATCCATAGT				Xq26.3a	Homo sapiens microRNA 450b (MIR450B), microRNA.					
Homo sapiens	Unigene	Hs.99203	ILMN_74598	HS.99203	Hs.99203		Hs.99203		4295813	AI446524			ILMN_1849745	0005810601	S	137	GCAGCCTCCTTGGAGGAGTGTGGGCCTCGTGAAAAGGTAACACAAGTACT	6	-	166720396-166720445		tj05a07.x1 NCI_CGAP_Gas4 Homo sapiens cDNA clone IMAGE:2140596 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020444.2	ILMN_167553	KIAA1191	NM_001079685.1	NM_001079685.1		57179	119120891	NM_001079685.1	KIAA1191	NP_001073153.1	ILMN_1749405	0003610088	S	2374	CAGGGCCTGGAACGCCTGTGCGGGGAGGTCACTCAATTCAAAATTTTCTG	5	-	175773361-175773410	5q35.2d	Homo sapiens KIAA1191 (KIAA1191), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ21022	FLJ21022
Homo sapiens	RefSeq	NM_145715.1	ILMN_181260	TIGD2	NM_145715.2	NM_145715.2		166815	124256528	NM_145715.2	TIGD2	NP_663761.1	ILMN_1690066	0001820497	S	1448	GTGGTTCGACTCTCGGAGCAGTGACTCAAGCTGTCAGGTGCTGACTGACA	4	+	90035415-90035464	4q22.1c	Homo sapiens tigger transposable element derived 2 (TIGD2), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	DKFZp667D1322	
Homo sapiens	RefSeq	NM_024513.1	ILMN_18567	FYCO1	NM_024513.1	NM_024513.1		79443	13470091	NM_024513.1	FYCO1	NP_078789.1	ILMN_1709032	0006900278	S	8188	GAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGG	3	-	45934659-45934708	3p21.31i	Homo sapiens FYVE and coiled-coil domain containing 1 (FYCO1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ13335; RUFY3; ZFYVE7; MGC126517; MGC126519	FLJ13335; RUFY3; ZFYVE7; MGC126517; MGC126519
Homo sapiens	RefSeq	NM_173462.2	ILMN_164191	PAPLN	NM_173462.3	NM_173462.3		89932	145309327	NM_173462.3	PAPLN	NP_775733.3	ILMN_1710495	0005310364	S	5555	CCTGGACACAGGAAAGACGGGCATTACAGGGACCAAAGCTCTGAAAGGTG	14	+	72810822-72810871	14q24.2b	Homo sapiens papilin, proteoglycan-like sulfated glycoprotein (PAPLN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp434F053; MGC50452	DKFZp434F053; MGC50452
Homo sapiens	RefSeq	NM_145740.3	ILMN_371072	GSTA1	NM_145740.3	NM_145740.3		2938	215276985	NM_145740.3	GSTA1	NP_665683.1	ILMN_3251497	0002900050	S	410	GCAGATTTGGGTGAAATGATCCTCCTTCTGCCCGTATGTCCACCTGAGGA	6	-	52658989-52659038	6p12.1d	Homo sapiens glutathione S-transferase alpha 1 (GSTA1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [pmid 11851347] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [pmid 3800996] [evidence IC ]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 1731620] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_943716.1	ILMN_306771	PRPF40A	NM_017892.3	NM_017892.3		55660	151301227	NM_017892.3	PRPF40A	NP_060362.3	ILMN_1666648	0000650068	A	65	ACGATGAGGCCGGGGACGGGAGCTGAGCGTGGAGGCCTCATGATGGGGCA	2	-	153572632-153572640:153573870-153573910	2q23.3d	Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (PRPF40A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLAF1; FBP11; NY-REN-6; HIP10; FLJ20585; HYPA; FNBP3; FBP-11	
Homo sapiens	RefSeq	XM_938545.1	ILMN_306771	PRPF40A	NM_017892.3	NM_017892.3		55660	151301227	NM_017892.3	PRPF40A	NP_060362.3	ILMN_1659854	0004890209	I	817	TGCAGCCAATGCTAATGCTTCCACTTCTGCTTCTAATACTGTCAGTGGAA	2	-	153533105-153533154	2q23.3d	Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (PRPF40A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLAF1; FBP11; NY-REN-6; HIP10; FLJ20585; HYPA; FNBP3; FBP-11	
Homo sapiens	RefSeq	XR_015414.2	ILMN_181730	LOC728553	XR_015414.2	XR_015414.2		728553	169167563	XR_015414.2	LOC728553		ILMN_3225505	0003610563	A	300	TGAGCTGGTTCGTACCAAGACCCTGGTGAAGAATTGCATCGTGCTCATCG	5	+	33198306-33198355	5p13.3b	PREDICTED: Homo sapiens misc_RNA (LOC728553), miscRNA.					
Homo sapiens	RefSeq	NM_001080447.1	ILMN_172660	TTLL8	NM_001080447.1	NM_001080447.1		164714	122937292	NM_001080447.1	TTLL8	NP_001073916.1	ILMN_2323816	0005900341	A	1890	ATCACCAGCTCTCCAGCGGGACTTGGGACTGAAGGAAGAGAAGGGGCTCC	22	-	50469122-50469171	22q13.33a	Homo sapiens tubulin tyrosine ligase-like family, member 8 (TTLL8), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]		
Homo sapiens	RefSeq	XM_001722128.1	ILMN_343910	LOC100130581	XM_001722128.1	XM_001722128.1		100130581	169211323	XM_001722128.1	LOC100130581	XP_001722180.1	ILMN_3263295	0005270403	M	643	GATATCTTGCGACTCGTCTTTCTCCAGGAAAACAGGGACCGCTCTCCGCC				17q21.31b	PREDICTED: Homo sapiens hypothetical protein LOC100130581 (LOC100130581), mRNA.					
Homo sapiens	RefSeq	XM_001720409.1	ILMN_335710	LOC442609	XM_001720409.1	XM_001720409.1		442609	169172318	XM_001720409.1	LOC442609	XP_001720461.1	ILMN_3200018	0001990341	A	383	GAGTGGTCAGATGAATCTGAGGAGGAGCCGGAGAAGGAGCTCGCCCCTGA				7q22.1f	PREDICTED: Homo sapiens similar to hCG1815881 (LOC442609), mRNA.					
Homo sapiens	RefSeq	XM_941253.1	ILMN_42931	LOC651966	XM_941253.1	XM_941253.1		651966	88948839	XM_941253.1	LOC651966	XP_946346.1	ILMN_1716498	0005820546	S	1854	GGTGTCCTGCTGGATAGATGAGCTGCCACCACCAAATGGATCAGACCCTG					PREDICTED: Homo sapiens similar to forkhead box O6 (LOC651966), mRNA.					
Homo sapiens	RefSeq	XM_372114.3	ILMN_38395	LOC644105	XM_372114.3	XM_372114.3		644105	89029566	XM_372114.3	LOC644105	XP_372114.3	ILMN_1668366	0007610709	I	636	TATTTCATCATGTTCTATTTAATTATTGTCTTAATTGGCATTGGTGACGA	9	+	68950327-68950376		PREDICTED: Homo sapiens similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like, transcript variant 1 (LOC644105), mRNA.					
Homo sapiens	RefSeq	XM_372114.3	ILMN_38395	LOC644105	XM_372114.3	XM_372114.3		644105	89029566	XM_372114.3	LOC644105	XP_372114.3	ILMN_1750308	0000730131	A	73	CAGCAGGTGGCCCGGTGCTGAGACACAAGGGAGTTGTTTCTGGTCTGCAG	9	+	68941934-68941983		PREDICTED: Homo sapiens similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like, transcript variant 1 (LOC644105), mRNA.					
Homo sapiens	RefSeq	NM_173538.1	ILMN_177063	CNBD1	NM_173538.1	NM_173538.1		168975	27734928	NM_173538.1	CNBD1	NP_775809.1	ILMN_1697236	0006770373	S	1462	GGTCTATTGTGACTACATATCCTGGATTCCCCAGGAAAGTCCCACTTTCG	8	+	88464071-88464120	8q21.3a-q21.3b	Homo sapiens cyclic nucleotide binding domain containing 1 (CNBD1), mRNA.				FLJ35802	FLJ35802
Homo sapiens	RefSeq	NM_176886.1	ILMN_178252	TAS2R45	NM_176886.1	NM_176886.1		259291	29126244	NM_176886.1	TAS2R45	NP_795367.1	ILMN_1702830	0007200544	S	774	ACCTGTCTTCATGTTCTGCCAAGCTATTGGATTCAGCTGTTCTTCAGCCC					Homo sapiens taste receptor, type 2, member 45 (TAS2R45), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	MGC119923; MGC119924; GPR59; ZG24P; MGC119925	MGC119923; MGC119924; GPR59; ZG24P; MGC119925
Homo sapiens	Unigene	Hs.560019	ILMN_114001	HS.560019	Hs.560019		Hs.560019		13669427	BG618056			ILMN_1824490	0005260743	S	245	GATGGGGTGTTACAATACCTGCTTATATATGCCAGCTGGGAGGAAAGAGG	12	-	101755486-101755535		602644945F1 NIH_MGC_76 Homo sapiens cDNA clone IMAGE:4766675 5, mRNA sequence					
Homo sapiens	RefSeq	NM_005099.3	ILMN_16701	ADAMTS4	NM_005099.3	NM_005099.3		9507	41327755	NM_005099.3	ADAMTS4	NP_005090.2	ILMN_2092933	0001660497	S	3986	GGCGTGAGCCACCGTGCCTGGCCACGCCCAACTAATTTTTGTATTTTTAG	1	-	159426457-159426506	1q23.3a	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 4 (ADAMTS4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 14744861] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10356395] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10751421] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 14744861] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 10751421] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ADAMTS-2; ADMP-1; KIAA0688; ADAMTS-4	ADAMTS-2; ADMP-1; KIAA0688; ADAMTS-4
Homo sapiens	RefSeq	NM_001420.3	ILMN_25048	ELAVL3	NM_001420.3	NM_001420.3		1995	49355760	NM_001420.3	ELAVL3	NP_001411.2	ILMN_1678618	0005960070	A	4403	GCTCAGCCCCTCCACCCCTCCCTTCATCCTGTTATTTATTCGGAAGGTTT	19	-	11562372-11562421	19p13.2b	Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) (ELAVL3), transcript variant 1, mRNA.				PLE21; HUCL; MGC20653; HUC; DKFZp547J036	PLE21; HUCL; MGC20653; HUC; DKFZp547J036
Homo sapiens	RefSeq	NM_003553.1	ILMN_1181	OR1E1	NM_003553.2	NM_003553.2		8387	153791201	NM_003553.2	OR1E1	NP_003544.2	ILMN_1759521	0004220451	S	876	GAGGAACAGAGACATGAAGGGAGCCCTGAGCAGAGTCATTCATCAGAAGA	17	-	3300779-3300828	17p13.3a	Homo sapiens olfactory receptor, family 1, subfamily E, member 1 (OR1E1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 1370859] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 1370859] [evidence NAS]	OR13-66; OR1E6; HGM071; OR1E5; OR1E8P; OST547; OR17-2; OR1E9P; OR17-32	OR13-66; OR1E6; HGM071; OR1E5; OR1E8P; OST547; OR17-2; OR1E9P; OR17-32
Homo sapiens	RefSeq	NM_017553.1	ILMN_183472	INO80	NM_017553.1	NM_017553.1		54617	38708320	NM_017553.1	INO80	NP_060023.1	ILMN_3248343	0003170538	S	5899	GAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAATC	15	-	41271356-41271405	15q15.1b	Homo sapiens INO80 homolog (S. cerevisiae) (INO80), mRNA.				INO80	INO80
Homo sapiens	RefSeq	NM_017553.1	ILMN_183472	INO80	NM_017553.1	NM_017553.1		54617	38708320	NM_017553.1	INO80	NP_060023.1	ILMN_1799387	0003400148	I	5722	TTGCACTGAGAGAGGAAGGGACAGCAGGAGTGAGGTGAAGAGGGCGGAGA	15	-	41271533-41271582	15q15.1b	Homo sapiens INO80 homolog (S. cerevisiae) (INO80), mRNA.				INO80	INO80
Homo sapiens	RefSeq	NM_032196.3	ILMN_183472	INO80	NM_017553.1	NM_017553.1		54617	38708320	NM_017553.1	INO80	NP_060023.1	ILMN_1678362	0003890048	A	5897	TGGAGCAGGTACCTCCGGGCGGGCAAGCCTCTGATTTGCACACCTGAAAA	15	-	41271358-41271407	15q15.1b	Homo sapiens INO80 homolog (S. cerevisiae) (INO80), mRNA.				INO80	INO80
Homo sapiens	RefSeq	NM_032562.2	ILMN_962	PLA2G12B	NM_032562.2	NM_032562.2		84647	45505134	NM_032562.2	PLA2G12B	NP_115951.2	ILMN_1808487	0004120392	S	989	TTGTGGGGAGTCCAGCCATTTGGGAGGCAATGACTTTCTGCTGGCCCATG	10	-	74694991-74695040	10q22.1g	Homo sapiens phospholipase A2, group XIIB (PLA2G12B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	GXIIIsPLA2; PLA2G13; MGC138151; FKSG71; GXIIB	GXIIIsPLA2; FKSG71; GXIIB; PLA2G13; MGC138151
Homo sapiens	RefSeq	NM_000235.2	ILMN_17379	LIPA	NM_000235.2	NM_000235.2		3988	51317398	NM_000235.2	LIPA	NP_000226.2	ILMN_1718063	0005360148	S	2207	CCCGCTACTGTCGTTATTGATCACATCTGTGTGAAGCCAAAGCCCCGTGG	10	-	90973522-90973567:90974585-90974588	10q23.31b	Homo sapiens lipase A, lysosomal acid, cholesterol esterase (LIPA), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 1718995] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 1718995] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: a steryl ester + H2O = a sterol + a fatty acid [goid 4771] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CESD; LAL	CESD; LAL
Homo sapiens	RefSeq	XR_041708.1	ILMN_338489	LOC728553	XR_041708.1	XR_041708.1		728553	169167781	XR_041708.1	LOC728553		ILMN_3299407	0004040411	M	177	GTGCAGGGAAGTAACAAGAAATACCGTGCCCTGAGGTTGGACGTGGGGGA				5p13.3b	PREDICTED: Homo sapiens misc_RNA (LOC728553), miscRNA.					
Homo sapiens	RefSeq	NM_004934.2	ILMN_7663	CDH18	NM_004934.2	NM_004934.2		1016	16445394	NM_004934.2	CDH18	NP_004925.1	ILMN_1733669	0007330561	S	2592	GCCTATGAGGGTCAGAGATCAGAAGCTGGGTCTATCAGCTCGCTGGATTC	5	-	19607502-19607551	5p14.3d	Homo sapiens cadherin 18, type 2 (CDH18), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EY-CADHERIN; CDH14; CDH14L; CDH24	EY-CADHERIN; CDH14; CDH14L; CDH24
Homo sapiens	RefSeq	XM_927326.1	ILMN_21644	MLC1	NM_015166.3	NM_015166.3		23209	93141206	NM_015166.3	MLC1	NP_055981.1	ILMN_1747725	0002120762	S	3308	CCAGGAGGCCTGGGAGATGCAGCTGGATGGGGCGGCCTGCAGACCCTGCC	22	-	50498422-50498471	22q13.33a	Homo sapiens megalencephalic leukoencephalopathy with subcortical cysts 1 (MLC1), transcript variant 1, mRNA.	Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [pmid 11254442] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 11254442] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 11254442] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	KIAA0027; VL; MLC; LVM	
Homo sapiens	RefSeq	NM_015166.2	ILMN_21644	MLC1	NM_015166.3	NM_015166.3		23209	93141206	NM_015166.3	MLC1	NP_055981.1	ILMN_1751471	0005490279	A	3046	TCCCGAGGGCGCCTGGGTCCTCCCAGCTGACGGCAGTAAATCCACAGTGA	22	-	50498684-50498733	22q13.33a	Homo sapiens megalencephalic leukoencephalopathy with subcortical cysts 1 (MLC1), transcript variant 1, mRNA.	Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [pmid 11254442] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 11254442] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 11254442] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	KIAA0027; VL; MLC; LVM	VL; MLC; KIAA0027; LVM
Homo sapiens	RefSeq	NM_015166.2	ILMN_21644	MLC1	NM_015166.3	NM_015166.3		23209	93141206	NM_015166.3	MLC1	NP_055981.1	ILMN_1690589	0000450358	I	513	TACTTCTTGCTGGAAGTCCCTCACCCAGAGACCAGTGCTCCCAACGGCAG	22	-	50523796-50523845	22q13.33a	Homo sapiens megalencephalic leukoencephalopathy with subcortical cysts 1 (MLC1), transcript variant 1, mRNA.	Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [pmid 11254442] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 11254442] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 11254442] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	KIAA0027; VL; MLC; LVM	VL; MLC; KIAA0027; LVM
Homo sapiens	RefSeq	NM_001079528.1	ILMN_175756	ABCC6	NM_001079528.1	NM_001079528.1		368	118582250	NM_001079528.1	ABCC6	NP_001072996.1	ILMN_2406654	0007160603	A	218	CATGGCCGGGGCTACCTCCGGATGTCCCCACTCTTCAAAGCCAAGATGGT	16	-	16223004-16223053	16p13.11a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 6 (ABCC6), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10835642] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8912525] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8912525] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8912525] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8912525] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 8912525] [evidence TAS]	MOATE; EST349056; ARA; PXE1; ABC34; PXE; MLP1; MRP6	MOATE; EST349056; ARA; PXE1; ABC34; PXE; MLP1; MRP6
Homo sapiens	RefSeq	NM_001079528.1	ILMN_175756	ABCC6	NM_001079528.1	NM_001079528.1		368	118582250	NM_001079528.1	ABCC6	NP_001072996.1	ILMN_2293902	0005310021	I	555	CCATGTAGACTCTTGGATACACAAGGTAATTTTAGAGCCACATTAGGATG	16	-	16222667-16222716	16p13.11a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 6 (ABCC6), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10835642] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8912525] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8912525] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8912525] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8912525] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 8912525] [evidence TAS]	MOATE; EST349056; ARA; PXE1; ABC34; PXE; MLP1; MRP6	MOATE; EST349056; ARA; PXE1; ABC34; PXE; MLP1; MRP6
Homo sapiens	RefSeq	NM_015478.5	ILMN_22845	L3MBTL	NM_015478.5	NM_015478.5		26013	117938327	NM_015478.5	L3MBTL	NP_056293.4	ILMN_2400940	0007610685	A	2295	TCTAGTCTGGACTGTGGCCCAGCTTGGGGACCTTGTGTGCTCAGATCATC	20	+	41603026-41603075	20q13.11b-q13.12a	Homo sapiens l(3)mbt-like (Drosophila) (L3MBTL), transcript variant I, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17540172] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	L3MBTL1; dJ138B7.3; FLJ41181; DKFZp586P1522; KIAA0681; H-L(3)MBT	L3MBTL1; dJ138B7.3; DKFZp586P1522; KIAA0681; H-L(3)MBT
Homo sapiens	RefSeq	NM_152475.1	ILMN_29570	ZNF417	NM_152475.1	NM_152475.1		147687	22748992	NM_152475.1	ZNF417	NP_689688.1	ILMN_1760294	0005290121	S	2720	GGGCCACATGCCCATTTCCCCACTTGCATGAATGTCGACACTGTAGCCAC	19	-	63110853-63110902	19q13.43c	Homo sapiens zinc finger protein 417 (ZNF417), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC34079	MGC34079
Homo sapiens	RefSeq	NM_016020.1	ILMN_3033	TFB1M	NM_016020.1	NM_016020.1		51106	7705784	NM_016020.1	TFB1M	NP_057104.1	ILMN_1733562	0002340626	S	932	ACCCTACTCTTCGGCCCCGCCAGCTCTCCATCTCACACTTTAAGAGCCTC	6	-	155620795-155620844	6q25.3a	Homo sapiens transcription factor B1, mitochondrial (TFB1M), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CGI75; mtTFB; CGI-75	CGI75; mtTFB; CGI-75
Homo sapiens	RefSeq	XM_942561.1	ILMN_35062	LOC652857	XM_942561.2	XM_942561.2		652857	113431055	XM_942561.2	LOC652857	XP_947654.1	ILMN_1655413	0002360053	S	341	CTGAAAAATTGACTGAACTTTCAGGTATGCATAAAATTACCTTTACATGA					PREDICTED: Homo sapiens similar to TFIIH basal transcription factor complex p44 subunit (Basic transcription factor 2 44 kDa subunit) (BTF2-p44) (General transcription factor IIH polypeptide 2) (LOC652857), mRNA.					
Homo sapiens	RefSeq	XM_001720394.1	ILMN_342665	LOC100132485	XM_001720394.1	XM_001720394.1		100132485	169172795	XM_001720394.1	LOC100132485	XP_001720446.1	ILMN_3241783	0007320286	S	737	CGGTTGGCGGAATTTTACTAGGTGTGTGTTGGTAGAGTGGGGCTGAGGTT	8	+	7422752-7422772:7422773-7422801	8p23.1e	PREDICTED: Homo sapiens hypothetical protein LOC100132485 (LOC100132485), mRNA.					
Homo sapiens	RefSeq	NM_145014.1	ILMN_14125	HYLS1	NM_145014.1	NM_145014.1		219844	21450730	NM_145014.1	HYLS1	NP_659451.1	ILMN_1747078	0001710397	S	1361	CCGTTGGGGTGTTCGTTGTGACCTTGCAAATGGTGTCATACCCAGGAAGC	11	+	125275300-125275349	11q24.2b	Homo sapiens hydrolethalus syndrome 1 (HYLS1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			FLJ32915; HLS	FLJ32915; HLS
Homo sapiens	RefSeq	NR_024259.1	ILMN_370440	LOC728606	NR_024259.1	NR_024259.1		728606	209969705	NR_024259.1	LOC728606		ILMN_3238767	0006060520	S	1910	CAGATTCCTGGGCTCCAGTCCTGGGTGATTCTTGCAGGTGGTCCATTGAC	18	-	24268223-24268272	18q11.2e	Homo sapiens hypothetical LOC728606 (LOC728606), non-coding RNA.					
Homo sapiens	RefSeq	NM_000597.2	ILMN_2732	IGFBP2	NM_000597.2	NM_000597.2		3485	55925575	NM_000597.2	IGFBP2	NP_000588.2	ILMN_1725193	0004200674	S	1153	CAAACACCGGCAGAAAACGGAGAGTGCTTGGGTGGTGGGTGCTGGAGGAT	2	+	217237127-217237176	2q35c	Homo sapiens insulin-like growth factor binding protein 2, 36kDa (IGFBP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	IGF-BP53; IBP2	IGF-BP53; IBP2
Homo sapiens	RefSeq	NM_206828.2	ILMN_2155	NLRP7	NM_206828.2	NM_206828.2		199713	75709195	NM_206828.2	NLRP7	NP_996611.2	ILMN_1658632	0004760041	I	2017	CATTCCGAACTGGGCTCGGCAGGATCTTCGCTCTCTTCGCCTCTGGACAG	19	-	60141356-60141405	19q13.42b	Homo sapiens NLR family, pyrin domain containing 7 (NLRP7), transcript variant 2, mRNA.		Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC126470; PYPAF3; NALP7; HYDM; CLR19.4; PAN7; MGC126471; NOD12	MGC126470; PYPAF3; NALP7; HYDM; CLR19.4; PAN7; MGC126471; NOD12
Homo sapiens	RefSeq	NM_006109.2	ILMN_41646	PRMT5	NM_006109.3	NM_006109.3		10419	88900510	NM_006109.3	PRMT5	NP_006100.2	ILMN_1811955	0005700520	S	2172	TTGCAGGGCTCAAGCCACCAATCTATGAAGACCTCAGGCCAGGGGGTGAG	14	-	23389896-23389945	14q11.2f	Homo sapiens protein arginine methyltransferase 5 (PRMT5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 9843966] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9843966] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein [goid 35246] [pmid 15369763] [evidence IDA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [pmid 15369763] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SKB1; HRMT1L5; IBP72; SKB1Hs; JBP1	SKB1; HRMT1L5; IBP72; SKB1Hs; JBP1
Homo sapiens	Unigene	Hs.550285	ILMN_110254	HS.550285	Hs.550285		Hs.550285		10808671	BF054775			ILMN_1853122	0002850044	S	46	GCAGCCTTCCAGTGCAGTTTTAAATTTCCTATGAGCATCATTTGGCTTCC	12	-	94573558-94573607		7i71a09.y1 NCI_CGAP_Brn20 Homo sapiens cDNA clone IMAGE:3340120 5, mRNA sequence					
Homo sapiens	RefSeq	XM_945014.1	ILMN_32097	LOC654020	XM_945014.1	XM_945014.1		654020	89059167	XM_945014.1	LOC654020	XP_950107.1	ILMN_1742441	0006860201	I	845	GGGGCAGAAGTGCACAGTCCGTCTACACCCATCCTCCCCAGTGTTGAGAA					PREDICTED: Homo sapiens similar to Glutathione S-transferase theta 1 (GST class-theta 1) (Glutathione transferase T1-1), transcript variant 2 (LOC654020), mRNA.					
Homo sapiens	RefSeq	XM_933170.1	ILMN_36610	LOC644019	XM_933170.1	XM_933170.1		644019	89029514	XM_933170.1	LOC644019	XP_938263.1	ILMN_1784202	0003420369	I	1074	AAGATACAATGAGGTGACTCAGGCAAAAGTACCTGGCCCTGTATAGTGAG	9	-	68497129-68497178	9q12i	PREDICTED: Homo sapiens similar to COBW domain containing 3, transcript variant 19 (LOC644019), mRNA.					
Homo sapiens	RefSeq	NM_019032.3	ILMN_23291	ADAMTSL4	NM_019032.4	NM_019032.4		54507	83281433	NM_019032.4	ADAMTSL4	NP_061905.2	ILMN_1777683	0000780315	I	3387	TACCCCTACTACACAGCCACCTGTTGCCGCTCTTGCGCACATGTCCTGGA	1	+	148799222-148799271	1q21.2b-q21.2c	Homo sapiens ADAMTS-like 4 (ADAMTSL4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 16364318] [evidence IDA]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 16364318] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TSRC1	DKFZP434K1772; PP12585; FLJ13544; PP9445; RP11-54A4.3; UNQ2803; PP1396
Homo sapiens	RefSeq	XM_936635.1	ILMN_39944	LOC647584	XM_936635.1	XM_936635.1		647584	88998834	XM_936635.1	LOC647584	XP_941728.1	ILMN_1788718	0002650711	S	84	GGAATCTTTGCCACAGCTGCCTAGAAGAACCAAGGCTCTTGCCATCTTCC					PREDICTED: Homo sapiens similar to DNA primase large subunit, 58kDa (LOC647584), mRNA.					
Homo sapiens	Unigene	Hs.401073	ILMN_89595	HS.401073	Hs.401073		Hs.401073		23301160	BU633905			ILMN_1895164	0004590047	S	511	CGGCCAAGTCACCACCTCTCTGCGCCTCAGCTTCCTCATCAGCAAAATGG	5	-	139070167-139070216		UI-H-FL1-bgw-g-15-0-UI.s1 NCI_CGAP_FL1 Homo sapiens cDNA clone UI-H-FL1-bgw-g-15-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020630.3	ILMN_162685	RET	NM_020975.4	NM_020975.4		5979	126273511	NM_020975.4	RET	NP_066124.1	ILMN_1706301	0006130646	A	3242	CTTGCGGCGTCCACTCCATCTGACTCCCTGATTTATGACGACGGCCTCTC	10	+	42942041-42942090	10q11.21a	Homo sapiens ret proto-oncogene (RET), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IEA]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7824936] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7824936] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure [goid 7497] [pmid 8114939] [evidence TAS]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IEA]; The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7824936] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RET51; CDHF12; RET-ELE1; HSCR1; MEN2A; PTC; MTC1; MEN2B	CDHF12; RET51; RET-ELE1; HSCR1; MEN2A; PTC; MEN2B; MTC1
Homo sapiens	RefSeq	NM_020975.3	ILMN_162685	RET	NM_020975.4	NM_020975.4		5979	126273511	NM_020975.4	RET	NP_066124.1	ILMN_1666314	0006060441	I	4428	TGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCAGTGGCTCATCCTAC	10	+	42944616-42944665	10q11.21a	Homo sapiens ret proto-oncogene (RET), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IEA]; The morphogenesis of an embryonic epithelium into a tube-shaped structure [goid 1838] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7824936] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7824936] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of the posterior midgut over time, from its formation to the mature structure [goid 7497] [pmid 8114939] [evidence TAS]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IEA]; The process whose specific outcome is the progression of the enteric nervous system over time, from its formation to the mature structure. The enteric nervous system is composed of two ganglionated neural plexuses in the gut wall which form one of the three major divisions of the autonomic nervous system. The enteric nervous system innervates the gastrointestinal tract, the pancreas, and the gall bladder. It contains sensory neurons, interneurons, and motor neurons. Thus the circuitry can autonomously sense the tension and the chemical environment in the gut and regulate blood vessel tone, motility, secretions, and fluid transport. The system is itself governed by the central nervous system and receives both parasympathetic and sympathetic innervation [goid 48484] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7824936] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RET51; CDHF12; RET-ELE1; HSCR1; MEN2A; PTC; MTC1; MEN2B	CDHF12; RET51; RET-ELE1; HSCR1; MEN2A; PTC; MEN2B; MTC1
Homo sapiens	Unigene	Hs.575162	ILMN_127343	HS.575162	Hs.575162		Hs.575162		83150922	DB344990			ILMN_1879978	0005550192	S	439	CATAGGAGGGGTCCCAAAGCCAGATGAAGGACCCAAAGCCAGGCCACAGA	5	+	139004667-139004716		DB344990 THYMU3 Homo sapiens cDNA clone THYMU3007063 3, mRNA sequence					
Homo sapiens	RefSeq	XM_932599.1	ILMN_44153	LOC645038	XM_932599.1	XM_932599.1		645038	89038326	XM_932599.1	LOC645038	XP_937692.1	ILMN_1756599	0007150576	S	347	AGGCTGTCGGCCTCCTCCCCGCACCCTCCCTGCTGCGGCCGGTGATGGCA	15	-	40115655-40115704		PREDICTED: Homo sapiens hypothetical protein LOC645038 (LOC645038), mRNA.					
Homo sapiens	RefSeq	NM_001910.2	ILMN_28622	CTSE	NM_001910.2	NM_001910.2		1510	23110950	NM_001910.2	CTSE	NP_001901.1	ILMN_1799887	0005900754	A	2139	TGCTGGTGCCTCTCTATTGGTAATGTTAAGACTGCTGGGTGGGTTTGGAG	1	+	204498638-204498687	1q32.1h	Homo sapiens cathepsin E (CTSE), transcript variant 1, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7983070] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 2674141] [evidence TAS]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [pmid 8765029] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 7789521] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	CATE	CATE
Homo sapiens	RefSeq	NM_001910.2	ILMN_28622	CTSE	NM_001910.2	NM_001910.2		1510	23110950	NM_001910.2	CTSE	NP_001901.1	ILMN_1693738	0001770307	I	981	CTGGCCCTTCCGACAAGATTAAGCAGCTGCAAAACGCCATTGGGGCAGCC	1	+	204495419-204495468	1q32.1h	Homo sapiens cathepsin E (CTSE), transcript variant 1, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7983070] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 2674141] [evidence TAS]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [pmid 8765029] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 7789521] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	CATE	CATE
Homo sapiens	RefSeq	NM_018975.2	ILMN_5664	TERF2IP	NM_018975.2	NM_018975.2		54386	52627148	NM_018975.2	TERF2IP	NP_061848.2	ILMN_1657983	0001410653	S	1770	TCCCCAAACCCTTGTCATTTCCCCCAGTGAGCTCTGATTTCTAGACTGCT	16	+	74248483-74248532	16q23.1a	Homo sapiens telomeric repeat binding factor 2, interacting protein (TERF2IP), mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 10850490] [evidence TAS]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17055345] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16166375] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 10850490] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32205] [pmid 17055345] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14690602] [evidence IPI]; Interacting selectively with single-stranded telomere-associated DNA [goid 43047] [pmid 12768206] [evidence IMP]	RAP1; DRIP5	RAP1; DRIP5
Homo sapiens	RefSeq	NM_203307.2	ILMN_22714	ZNF321	NM_203307.2	NM_203307.2		399669	72384362	NM_203307.2	ZNF321	NP_976052.2	ILMN_1760285	0006220603	S	1544	GGGAGCGATCCTTTTAAGGCAAACAAGGGAGATAGTACCTGTATCTTAGT	19	-	58122940-58122989	19q13.41a	Homo sapiens zinc finger protein 321 (ZNF321), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC35402; FLJ39509; DKFZp781C2298	MGC35402; FLJ39509; DKFZp781C2298
Homo sapiens	RefSeq	NM_203307.2	ILMN_22714	ZNF321	NM_203307.2	NM_203307.2		399669	72384362	NM_203307.2	ZNF321	NP_976052.2	ILMN_2150103	0005910228	S	2007	GAATGACCGCGCCCAGCCGCAGGCGCAACTTTTTTGAGTTTTCCTGGCCA	19	-	58122477-58122526	19q13.41a	Homo sapiens zinc finger protein 321 (ZNF321), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC35402; FLJ39509; DKFZp781C2298	MGC35402; FLJ39509; DKFZp781C2298
Homo sapiens	RefSeq	XM_944404.1	ILMN_38406	LOC650881	XM_944404.1	XM_944404.1		650881	89039115	XM_944404.1	LOC650881	XP_949497.1	ILMN_1680248	0005260301	S	188	GGACGTCCCCGGCGGGCCCAGGAGGTCGGAAAGCACCCCCAGCTCATCCA					PREDICTED: Homo sapiens hypothetical protein LOC650881 (LOC650881), mRNA.					
Homo sapiens	RefSeq	NM_022076.2	ILMN_25358	DUSP21	NM_022076.2	NM_022076.2		63904	33942082	NM_022076.2	DUSP21	NP_071359.2	ILMN_1746194	0000620398	S	695	CAATGTAAGCCATCCCGGCCAGCCCCTGACATCTGCCATCGATCTTGCAC	X	+	44588888-44588895:44588896-44588937	Xp11.3b	Homo sapiens dual specificity phosphatase 21 (DUSP21), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12408986] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12408986] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 12408986] [evidence NAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [pmid 12408986] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC149878; LMWDSP21	MGC149878; LMWDSP21
Homo sapiens	RefSeq	NM_130840.2	ILMN_19699	ATP6V0A4	NM_130840.2	NM_130840.2		50617	85386055	NM_130840.2	ATP6V0A4	NP_570855.2	ILMN_2394287	0006110328	A	2537	CTGTCCTGACAGTAGCCATCCTTCTGATCATGGAGGGCCTCTCTGCTTTC	7	-	138394391-138394440	7q34a	Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a4 (ATP6V0A4), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 10973252] [evidence IDA]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [pmid 10973252] [evidence IDA]; The portion of the plasma membrane surrounding the brush border [goid 31526] [pmid 14638902] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 10973252] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [pmid 10973252] [evidence IMP]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 12414817] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 12414817] [evidence IMP]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 10973252] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12649290] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]	VPH1; RDRTA2; STV1; MGC130016; VPP2; RTA1C; A4; RTADR; ATP6N1B; ATP6N2; MGC130017	VPH1; RDRTA2; STV1; MGC130016; VPP2; RTA1C; A4; RTADR; ATP6N1B; ATP6N2; MGC130017
Homo sapiens	RefSeq	NM_004451.3	ILMN_9546	ESRRA	NM_004451.3	NM_004451.3		2101	18860919	NM_004451.3	ESRRA	NP_004442.3	ILMN_1774272	0001660541	S	1873	TGCCCCCTTCGCTCCTCCTCTCATCATTTGCATTGGGCATTAGTGTCCCC	11	+	63840438-63840487	11q13.1b	Homo sapiens estrogen-related receptor alpha (ESRRA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9286700] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR3B1; ERRalpha; ERRa; ERR1; ESRL1	NR3B1; ERRalpha; ERRa; ERR1; ESRL1
Homo sapiens	RefSeq	NM_017611.2	ILMN_12326	SLC43A3	NM_017611.2	NM_017611.2		29015	40788008	NM_017611.2	SLC43A3	NP_060081.1	ILMN_2330307	0002600431	A	1807	CCACCACCTTTGAGGACCTCGTGTCCCAAAAGACTTTGCCTATCCCAGCA	11	-	57175167-57175216	11q12.1a	Homo sapiens solute carrier family 43, member 3 (SLC43A3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FOAP-13; EEG1; PRO1659; DKFZp762A227; SEEEG-1	FOAP-13; EEG1; PRO1659; DKFZp762A227; SEEEG-1
Homo sapiens	Unigene	Hs.384605	ILMN_89024	HS.384605	Hs.384605		Hs.384605		3483617	AF086272			ILMN_1915553	0000460689	S	424	ACCTGGGGCCACCAATTGATGTAACCAACTACCACAGATTGTCACTGGGC	2	-	48388963-48389012		Homo sapiens full length insert cDNA clone ZD44H09					
Homo sapiens	RefSeq	XM_943460.1	ILMN_35100	LOC648790	XM_943460.2	XM_943460.2		648790	113422902	XM_943460.2	LOC648790	XP_948553.1	ILMN_1669358	0002470731	S	247	TTCCCCTCTGTGATGCATTTTGGAATGAGTGGGTTTGATGCCCACACCTT					PREDICTED: Homo sapiens hypothetical LOC648790 (LOC648790), mRNA.					
Homo sapiens	RefSeq	NM_016204.1	ILMN_28885	GDF2	NM_016204.1	NM_016204.1		2658	7705307	NM_016204.1	GDF2	NP_057288.1	ILMN_1760363	0007550279	S	1783	CACTGCAGAGACTGATGGAAGTTAGAGAGGTGGAGGAGGCCAGCTCGCTC	10	-	48413195-48413244	10q11.22b	Homo sapiens growth differentiation factor 2 (GDF2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process that decreases the rate, frequency, or extent of the orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 10596] [pmid 17068149] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 17068149] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 17068149] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the activin family binding to a cell surface receptor [goid 32924] [pmid 17068149] [evidence IDA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 17068149] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17068149] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	BMP-9; BMP9	BMP-9; BMP9
Homo sapiens	RefSeq	NM_006801.2	ILMN_28854	KDELR1	NM_006801.2	NM_006801.2		10945	32307173	NM_006801.2	KDELR1	NP_006792.1	ILMN_2130411	0002510209	S	1398	TGGTCTTCTCCTGGTTTTTTGGCAAATTAGGGGGGCCCGGGGCTCAAGTG	19	-	53577748-53577797	19q13.32c	Homo sapiens KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 (KDELR1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2172835] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 2172835] [evidence TAS]	The retention in the endoplasmic reticulum (ER) lumen of soluble resident proteins. Sorting receptors retrieve proteins with ER localization signals, such as KDEL and HDEL sequences or some transmembrane domains, that have escaped to the cis-Golgi network and return them to the ER. Abnormally folded proteins and unassembled subunits are also selectively retained in the ER [goid 6621] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 2172835] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a KDEL sequence, the C terminus tetrapeptide sequence Lys-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum [goid 5046] [pmid 2172835] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	ERD2.1; ERD2; PM23; HDEL	ERD2.1; HDEL; ERD2; PM23
Homo sapiens	RefSeq	XM_942778.1	ILMN_40053	LOC642194	XM_942778.1	XM_942778.1		642194	88958948	XM_942778.1	LOC642194	XP_947871.1	ILMN_1699027	0001510577	S	150	AAGTCGCCCGGACCCGCGGCCCCGGCGCCCTGCGGCCGGTCCGTGCGCGC					PREDICTED: Homo sapiens hypothetical protein LOC642194 (LOC642194), mRNA.					
Homo sapiens	Unigene	Hs.282556	ILMN_84602	HS.282556	Hs.282556		Hs.282556		9876537	AV655523			ILMN_1896447	0001440338	S	213	GAGAACGGGAGAGCGAGGCGGAGAGGGTGTGAATGTGTGTGTTAGGGAGT	16	-	49744836-49744885		AV655523 GLC Homo sapiens cDNA clone GLCEHF06 3, mRNA sequence					
Homo sapiens	RefSeq	Hs.568260	ILMN_308315	MIAT	NR_003491.1	NR_003491.1		440823	134031964	NR_003491.1	MIAT		ILMN_1864900	0000430438	S	9645	CTGAGCCCAAGCAGGCACATTCTCTTCGACCCCTCCCTCATTCAGTCTGC	22	+	25401941-25401990	22q12.1a	Homo sapiens myocardial infarction associated transcript (non-protein coding) (MIAT), non-coding RNA.				C22orf35; FLJ25967; FLJ38367; FLJ25887; FLJ45323	
Homo sapiens	RefSeq	XM_928077.1	ILMN_44146	LOC645015	XM_928077.2	XM_928077.2		645015	113422459	XM_928077.2	LOC645015	XP_933170.2	ILMN_1787954	0007510735	S	583	CCTTGGCTGGAGGCCGAGGACTACCCCCTGCTTCTAGGGTCGGTGGACCT	11	+	67312494-67312530:67314089-67314101	11q13.2a	PREDICTED: Homo sapiens similar to beta-1,4-mannosyltransferase (LOC645015), mRNA.					
Homo sapiens	RefSeq	NM_005838.2	ILMN_3816	GLYAT	NM_005838.3	NM_005838.3		10249	111038142	NM_005838.3	GLYAT	NP_005829.3	ILMN_1668510	0006350324	A	545	ACGCATTCTCTATATGGCAGCTGAAACAGCCAAGGAACTGACTCCTTTCC	11	-	58478111-58478160	11q12.1c	Homo sapiens glycine-N-acyltransferase (GLYAT), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9202629] [evidence TAS]	The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 7802672] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 9202629] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [pmid 9202629] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine [goid 47961] [evidence IEA]	ACGNAT; CAT; GAT	ACGNAT; CAT; GAT
Homo sapiens	RefSeq	NM_005838.2	ILMN_3816	GLYAT	NM_005838.3	NM_005838.3		10249	111038142	NM_005838.3	GLYAT	NP_005829.3	ILMN_1757477	0005810053	I	845	GGCCTCTGGCTACCACTTGGACCTTTATTGCCCTTCCTGCTTTCTTCCTC	11	-	58477811-58477860	11q12.1c	Homo sapiens glycine-N-acyltransferase (GLYAT), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9202629] [evidence TAS]	The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 7802672] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 9202629] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [pmid 9202629] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine [goid 47961] [evidence IEA]	ACGNAT; CAT; GAT	ACGNAT; CAT; GAT
Homo sapiens	Unigene	Hs.528210	ILMN_101025	HS.528210	Hs.528210		Hs.528210		39888064	CK299576			ILMN_1852279	0003140730	S	81	GATTGATGATGGAGGGGAGTACCAGGGCAGATTGTGGAGCTAATGGATTG	3	-	165915763-165915812		UI-E-EJ1-ajv-n-10-0-UI.s1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajv-n-10-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016332.2	ILMN_7309	SEPX1	NM_016332.2	NM_016332.2		51734	45439350	NM_016332.2	SEPX1	NP_057416.1	ILMN_1719661	0001440243	S	1211	GGAGGCCCTTCCCAAGGTGTGGTGACTGTGCCTTACTGTACATGCTCGGA	16	-	1988340-1988389	16p13.3e	Homo sapiens selenoprotein X, 1 (SEPX1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues [goid 30091] [pmid 14699060] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on oxidized methionine in peptide linkage with specificity for the R enantiomer. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 318] [evidence IEA]; Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 14699060] [evidence ISS]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [evidence IEA]	MSRB1; SELR; MGC3344; HSPC270; SELX	MSRB1; SELR; MGC3344; HSPC270; SELX
Homo sapiens	Unigene	Hs.576292	ILMN_128473	HS.576292	Hs.576292		Hs.576292		13965530	BG698340			ILMN_1866952	0005890056	S	435	CGCACTTGGTTCATCGGAAAAAGCCACACACAGCTGCCCGGAGGACTCTG	1	-	9483955-9484004		602658226F2 NCI_CGAP_Skn3 Homo sapiens cDNA clone IMAGE:4801470 5, mRNA sequence					
Homo sapiens	RefSeq	NM_016615.2	ILMN_165004	SLC6A13	NM_016615.2	NM_016615.2		6540	21361580	NM_016615.2	SLC6A13	NP_057699.2	ILMN_1707710	0006960017	S	1802	GGCTCCCGCCACCCCCAGGACCTCACTGCTCAGACTCACAGAGCTAGAGT	12	-	330124-330173	12p13.33d	Homo sapiens solute carrier family 6 (neurotransmitter transporter, GABA), member 13 (SLC6A13), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) = gamma-aminobutyric acid(in) + Na+(in) [goid 5332] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	GAT-2; GAT2	GAT-2; GAT2
Homo sapiens	RefSeq	XM_941726.1	ILMN_35134	LOC391378	XM_941726.1	XM_941726.1		391378	88955135	XM_941726.1	LOC391378	XP_946819.1	ILMN_1738174	0006330291	A	31	GCCATGCGATATCCTAAAGAGCCTGAGCAGCTCTTCACTGGAAGGCTGAG				2p15a	PREDICTED: Homo sapiens similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP) (LOC391378), mRNA.					
Homo sapiens	RefSeq	NM_033126.1	ILMN_7925	PSKH2	NM_033126.1	NM_033126.1		85481	14916454	NM_033126.1	PSKH2	NP_149117.1	ILMN_1704176	0001980647	S	894	CAAACTACTGATTTTGGAGGCTGGTCATCGCATGTCAGCTGGCCAGGCCC	8	-	87130021-87130070	8q21.2b	Homo sapiens protein serine kinase H2 (PSKH2), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_001276.2	ILMN_23515	CHI3L1	NM_001276.2	NM_001276.2		1116	144226250	NM_001276.2	CHI3L1	NP_001267.2	ILMN_3307868	0001990037	S	1507	GGGATGGGGCTGTGGGGATAGTGAGGCATCGCAATGTAAGACTCGGGATT	1	-	203148339-203148388	1q32.1e	Homo sapiens chitinase 3-like 1 (cartilage glycoprotein-39) (CHI3L1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 8245017] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8245017] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 8245017] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	DKFZp686N19119; FLJ38139; YYL-40; HCGP-3P; HC-gp39; YKL40; GP39	HC-gp39; YKL40; YYL-40; HCGP-3P; GP39
Homo sapiens	RefSeq	XM_001721047.1	ILMN_336334	LOC100132139	XM_001721047.1	XM_001721047.1		100132139	169184296	XM_001721047.1	LOC100132139	XP_001721099.1	ILMN_3236694	0002230612	S	407	CTTTCTCTGTCTCACCAACCTGACAAAAAAGGTGTGCCAAGGGACTTCAT	9	+	68945380-68945429	9q12i	PREDICTED: Homo sapiens similar to methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like (LOC100132139), mRNA.					
Homo sapiens	RefSeq	NM_078481.2	ILMN_26363	CD97	NM_078481.2	NM_078481.2		976	68508935	NM_078481.2	CD97	NP_510966.1	ILMN_1676718	0004890253	I	673	TATCAGTGCCGCTGCCGCCCGGGCTGGCAACCGATTCCGGGGTCCCCCAA	19	+	14368960-14369009	19p13.12c	Homo sapiens CD97 molecule (CD97), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8955192] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7636245] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8955192] [evidence TAS]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 7636245] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 8955192] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7636245] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7636245] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7636245] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 8955192] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TM7LN1	TM7LN1
Homo sapiens	RefSeq	NM_078481.2	ILMN_26363	CD97	NM_078481.2	NM_078481.2		976	68508935	NM_078481.2	CD97	NP_510966.1	ILMN_1673363	0006960630	A	2951	GGGCGCTTGTCCCATCCTGGACTTTTCCTCTCATGTCTTTGCTGCAGAAC	19	+	14380253-14380302	19p13.12c	Homo sapiens CD97 molecule (CD97), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8955192] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7636245] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8955192] [evidence TAS]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 7636245] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 8955192] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7636245] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7636245] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7636245] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 8955192] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TM7LN1	TM7LN1
Homo sapiens	RefSeq	NM_004324.3	ILMN_10832	BAX	NM_004324.3	NM_004324.3		581	34335114	NM_004324.3	BAX	NP_004315.1	ILMN_1683300	0007550110	I	819	GCCTCCACTGCCTCTGGAATTGCTCAAGTTCATTGATGACCCTCTGACCC	19	+	49464447-49464496	19q13.33a	Homo sapiens BCL2-associated X protein (BAX), transcript variant beta, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11912183] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 11136736] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11912183] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10629050] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any constituent part of cytosol, that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 44445] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The non-specific expansion of T cell populations within a whole or part of an organism to reach to a total number of T cells which will then remain stable over time in the absence of an external stimulus [goid 1777] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The process by which a protein is incorporated into a mitochondrial membrane as an early step in apoptosis [goid 1844] [evidence IEA]; The non-specific expansion of B cell populations within a whole or part of an organism to reach to a total number of B cells which will then remain stable over time in the absence of an external stimulus [goid 2358] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11912183] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 11912183] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]; The breakdown of the nucleus into small membrane-bounded compartments, or blebs, each of which contain compacted DNA [goid 30264] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 9111042] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 9111042] [evidence IPI]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [pmid 15637643] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Programmed cell death that occurs in the developing retina [goid 46666] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9111042] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16608847] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9111042] [evidence IPI]; Interacting selectively with the BH3 domain of a protein of the Bcl-2 family. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death [goid 51434] [evidence IEA]	Bax zeta	Bax zeta
Homo sapiens	RefSeq	XR_041059.1	ILMN_345126	GDF5OS	XR_041059.1	XR_041059.1		554250	169214785	XR_041059.1	GDF5OS		ILMN_3188215	0007210626	A	1265	GGGGTGTTCACCTGAAGATGTGGCTGGGGATGATTTGCGTGATTCTGGTG				20q11.22b	PREDICTED: Homo sapiens misc_RNA (GDF5OS), miscRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]				
Homo sapiens	RefSeq	XR_041059.1	ILMN_345126	GDF5OS	XR_041059.1	XR_041059.1		554250	169214785	XR_041059.1	GDF5OS		ILMN_3264684	0004640068	M	1081	AGAAGTCATTCCCTGCAACCTCACCAAGGGAGCCAGTCACTTCGAGGCTG				20q11.22b	PREDICTED: Homo sapiens misc_RNA (GDF5OS), miscRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]				
Homo sapiens	RefSeq	NM_006637.1	ILMN_165666	OR5I1	NM_006637.1	NM_006637.1		10798	5729959	NM_006637.1	OR5I1	NP_006628.1	ILMN_1664771	0006270719	S	569	CCTGCACTGACACAACAATTAATGAGTGGCTCCTCTCCACATACGGCAGC	11	-	55703258-55703307	11q11c	Homo sapiens olfactory receptor, family 5, subfamily I, member 1 (OR5I1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9787077] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	HSOlf1; OLF1	HSOlf1; OLF1
Homo sapiens	RefSeq	NM_153700.2	ILMN_180253	STRC	NM_153700.2	NM_153700.2		161497	31559780	NM_153700.2	STRC	NP_714544.1	ILMN_2170930	0007150181	S	5393	GCCACCTGCTATGAGCCTGTCTCTACAGTAGAAGGAGATTGTGGGGAGAG	15	-	43891833-43891869:43891870-43891882	15q15.3a	Homo sapiens stereocilin (STRC), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]		DFNB16; MGC156147	DFNB16; MGC156147
Homo sapiens	RefSeq	NM_001004738.1	ILMN_25044	OR5L1	NM_001004738.1	NM_001004738.1		219437	52317119	NM_001004738.1	OR5L1	NP_001004738.1	ILMN_1692439	0006580592	S	398	CAGTCACCATGTCTTGGAAGGTGCGTGTGGAGCTGGCTTCTTGCTGCTAC	11	+	55335916-55335965	11q11c	Homo sapiens olfactory receptor, family 5, subfamily L, member 1 (OR5L1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-151; OST262	OST262; OR11-151
Homo sapiens	RefSeq	XR_038572.1	ILMN_340706	LOC727836	XR_038572.1	XR_038572.1		727836	169174837	XR_038572.1	LOC727836		ILMN_3240207	0004220286	S	273	GAGATCAAAGTATCAACATGAATAGGAGTTTGAAAGATGATTCCAGCCCT	9	+	69720108-69720157	9q12j	PREDICTED: Homo sapiens misc_RNA (LOC727836), miscRNA.					
Homo sapiens	RefSeq	NM_033169.1	ILMN_138972	B3GALT3	NM_033169.1	NM_033169.1		8706	15451878	NM_033169.1	B3GALT3	NP_149359.1	ILMN_1815287	0003940711	I	3	GACCCGGGGCGTTTGCAGCGGTGCCGAGGAAGAGGACGGGAACGGTGTTA	3	-	162305268-162305317	3q26.1a	Homo sapiens UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 3 (B3GALT3), transcript variant 4, mRNA.				galT3; P1; B3GALNT1; GLCT3; P; Gb4Cer; beta3Gal-T3	galT3; P1; B3GALNT1; GLCT3; P; Gb4Cer; beta3Gal-T3
Homo sapiens	RefSeq	XR_041104.1	ILMN_340843	MGC26356	XR_041104.1	XR_041104.1		642280	169166546	XR_041104.1	MGC26356		ILMN_3300640	0007150202	M	1505	GGTCCTCAACCCTTACTGTACACCAGAGAATTCAGACAGGTGAGAAACAT				4p16.3d	PREDICTED: Homo sapiens misc_RNA (MGC26356), miscRNA.					
Homo sapiens	RefSeq	NM_004202.2	ILMN_173170	TMSB4Y	NM_004202.2	NM_004202.2		9087	34328944	NM_004202.2	TMSB4Y	NP_004193.1	ILMN_1776195	0001230341	S	1360	AGTGGCGTGCCCCTTGGCCTCACAGGCAAAGAATAACTTAAAAGCTGACG	Y	+	14326989-14327038	Yq11.221a	Homo sapiens thymosin beta 4, Y-linked (TMSB4Y), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8064] [pmid 8838802] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers [goid 42989] [pmid 8838802] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	TB4Y; MGC26307	TB4Y; MGC26307
Homo sapiens	RefSeq	NM_001830.2	ILMN_29785	CLCN4	NM_001830.3	NM_001830.3		1183	153252025	NM_001830.3	CLCN4	NP_001821.2	ILMN_1728369	0003870066	S	4421	CCCCAGAGACGCTCAGCTTGTATCCATTGACTGGAAGTCTGTCACGTGGC	X	+	10162658-10162707	Xp22.2	Homo sapiens chloride channel 4 (CLCN4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [pmid 10564087] [evidence IDA]	Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [pmid 8069296] [evidence TAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	ClC-4A; CLC4; MGC163150; ClC-4	ClC-4A; CLC4; ClC-4
Homo sapiens	RefSeq	XR_015914.2	ILMN_173106	LOC730268	XR_015914.2	XR_015914.2		730268	169163273	XR_015914.2	LOC730268		ILMN_3299447	0004730246	M	380	AGATGCAATTTATCACTGTCGTGAGCAGCCTGCCTCAGACTGGCCAGAAG	2	+	87797301-87797350	2p11.2d	PREDICTED: Homo sapiens hypothetical LOC730268 (LOC730268), mRNA.					
Homo sapiens	Unigene	Hs.539784	ILMN_104743	HS.539784	Hs.539784		Hs.539784		3078041	AA929062			ILMN_1885808	0000830112	S	140	GCATATTTGGTGACATGGAGGGCTGGGGGAGAGGTGTGTGGACTATGCAC					on50d02.s1 NCI_CGAP_Co8 Homo sapiens cDNA clone IMAGE:1560099 3 similar to contains MER18.t1 MER18 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_203393.1	ILMN_28788	LOC389458	NM_203393.1	NM_203393.1		389458	42794613	NM_203393.1	LOC389458	NP_976327.1	ILMN_2054938	0006840403	S	296	CTGTATTGATGGGGCTGTGGTGGCCACGCGACCAGAAAGCCGGGGAGGAA	7	+	5079138-5079187	7p22.1d	Homo sapiens hypothetical gene supported by BC031661 (LOC389458), mRNA.				MGC:35170	MGC:35170
Homo sapiens	RefSeq	NM_014224.1	ILMN_23664	PGA5	NM_014224.1	NM_014224.1		5222	23943853	NM_014224.1	PGA5	NP_055039.1	ILMN_1717572	0001580437	S	1194	TTAAGCCTAAGTCTCTTCAGCCACCTCCCAGGAAGATCTGGCCTCCGTCC	11	+	60775326-60775329:60775330-60775375	11q12.2b	Homo sapiens pepsinogen 5, group I (pepsinogen A) (PGA5), mRNA.					
Homo sapiens	RefSeq	XM_929311.1	ILMN_37482	LOC646388	XM_929311.1	XM_929311.1		646388	89033920	XM_929311.1	LOC646388	XP_934404.1	ILMN_1673085	0004850730	S	28	CTGTCCAGATCTTGTCCTGATCATCCCAAAGGACTCTGTGCTTATGGTGG	11	-	40062019-40062068	11p12b	PREDICTED: Homo sapiens similar to zinc finger, CCHC domain containing 9 (LOC646388), mRNA.					
Homo sapiens	RefSeq	XM_377476.3	ILMN_165970	MGC57346	XM_377476.4	XM_377476.4		401884	113426926	XM_377476.4	MGC57346	XP_377476.4	ILMN_1784428	0000240152	A	1666	GGAGATGTGAGATTCCCAGCCCACCTGGTATTGCCCTCGAGTTAGTGGTA	17	+	41070908-41070957	17q21.31d	PREDICTED: Homo sapiens hypothetical LOC401884 (MGC57346), mRNA.					
Homo sapiens	RefSeq	NM_178034.1	ILMN_139374	PLA2G4D	NM_178034.1	NM_178034.1		283748	29837661	NM_178034.1	PLA2G4D	NP_828848.1	ILMN_1662351	0003360551	S	2806	GTCACCCAGGCCAAGTTCAATGGTGCAATCTGGCTCACTGCATCCTCAAC	15	-	40146959-40147008	15q15.1d	Homo sapiens phospholipase A2, group IVD (cytosolic) (PLA2G4D), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	cPLA2delta	cPLA2delta
Homo sapiens	RefSeq	XM_001717065.1	ILMN_352440	LOC100129781	XM_001717065.1	XM_001717065.1		100129781	169209882	XM_001717065.1	LOC100129781	XP_001717117.1	ILMN_3273229	0001940427	M	749	CCTCTCTCCTGCTGGTTGGGAGATGCAAAGATGTTTCCAGAGAGGGGCTG	16	+	14327475-14327524	16p13.12a	PREDICTED: Homo sapiens hypothetical protein LOC100129781 (LOC100129781), mRNA.					
Homo sapiens	RefSeq	NM_032153.3	ILMN_9668	ZIC4	NM_032153.3	NM_032153.3		84107	53832032	NM_032153.3	ZIC4	NP_115529.2	ILMN_2120624	0004490288	S	3545	GTGCTGGTCCCCCTACTCTGTGTGTGCTGAATAAATGGCTTGTAAAGAAG	3	-	148587019-148587068	3q24e	Homo sapiens Zic family member 4 (ZIC4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ42609; FLJ45833	FLJ42609; FLJ45833
Homo sapiens	RefSeq	NM_001982.2	ILMN_162069	ERBB3	NM_001982.2	NM_001982.2		2065	54792099	NM_001982.2	ERBB3	NP_001973.2	ILMN_1751346	0004560288	I	5299	TGCACTGAATCAAGTCTAACCCCAACAGCCACATCCTCCTATACCTAGAC	12	+	54783183-54783232	12q13.2c	Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) (ERBB3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11389077] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2687875] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 12646923] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IEA]; Any protein group composed of two or more subunits, which may or may not be identical, which undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43235] [pmid 7514177] [evidence ISS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 7556068] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [pmid 11389077] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14068] [pmid 17701904] [evidence TAS]; The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions [goid 21545] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 12646923] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 11389077] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a substance from a cell or group of cells [goid 51048] [pmid 10559227] [evidence IDA]	Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7514177] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [pmid 11389077] [evidence IPI]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [pmid 7514177] [evidence ISS]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [pmid 7556068] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11389077] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10572067] [evidence IDA]	c-erbB-3; c-erbB3; p85-sErbB3; p45-sErbB3; ErbB-3; erbB3-S; MGC88033; p180-ErbB3; MDA-BF-1; HER3	c-erbB-3; LCCS2; c-erbB3; p85-sErbB3; p45-sErbB3; ErbB-3; erbB3-S; MGC88033; p180-ErbB3; MDA-BF-1; HER3
Homo sapiens	RefSeq	NM_182746.1	ILMN_16572	MCM4	NM_182746.1	NM_182746.1		4173	33469916	NM_182746.1	MCM4	NP_877423.1	ILMN_2412860	0002630711	A	3350	GATGACAGGCATAGCCTGGGCATATCACCTCATTGGTAAAGGGCTAGAGC	8	+	48890001-48890050	8q11.21b	Homo sapiens minichromosome maintenance complex component 4 (MCM4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8265339] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10846177] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9465298] [evidence NAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	P1-CDC21; CDC54; MGC33310; CDC21; hCdc21	P1-CDC21; CDC54; MGC33310; CDC21; hCdc21
Homo sapiens	RefSeq	NM_080491.1	ILMN_3317	GAB2	NM_080491.1	NM_080491.1		9846	18105041	NM_080491.1	GAB2	NP_536739.1	ILMN_1815758	0003120537	I	19	GTGGTGTGCACCGGCTGGCTGAGGAAATCGCCTCCCGAGAAGAAGTTGAG	11	-	78128698-78128747	11q14.1a	Homo sapiens GRB2-associated binding protein 2 (GAB2), transcript variant 1, mRNA.				KIAA0571	KIAA0571
Homo sapiens	RefSeq	NM_080491.1	ILMN_3317	GAB2	NM_080491.1	NM_080491.1		9846	18105041	NM_080491.1	GAB2	NP_536739.1	ILMN_1665964	0000540368	A	5592	CGAGGGGGTCCCCAAGAGATCCAGGCTGTCATGTGATTTATGGTGGCATG	11	-	77926707-77926756	11q14.1a	Homo sapiens GRB2-associated binding protein 2 (GAB2), transcript variant 1, mRNA.				KIAA0571	KIAA0571
Homo sapiens	RefSeq	XM_943355.1	ILMN_42737	LOC388923	XM_943355.2	XM_943355.2		388923	113413614	XM_943355.2	LOC388923	XP_948448.1	ILMN_1706865	0006020020	S	7	GATCGGGGAGGACACACAGGTGGGCGTCTCAAGAACTGTGGTGTACACAG				2p25.3b	PREDICTED: Homo sapiens hypothetical LOC388923 (LOC388923), mRNA.					
Homo sapiens	Unigene	Hs.565660	ILMN_118108	HS.565660	Hs.565660		Hs.565660		24472870	CA309816			ILMN_1876189	0006840041	S	637	ACATGTGGGGGCAAGATGGCACAGGCATGGTTTGCTGGAGCACTGTCAGG	20	-	38573525-38573574		UI-H-FT1-bic-j-06-0-UI.s1 NCI_CGAP_FT1 Homo sapiens cDNA clone UI-H-FT1-bic-j-06-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_201253.1	ILMN_2594	CRB1	NM_201253.1	NM_201253.1		23418	41327707	NM_201253.1	CRB1	NP_957705.1	ILMN_1762139	0000050603	A	4240	ACCTCCAACAAAAGGGCAACTCAGGGAACCTACAGCCCCAGCCGTCAGGA	1	+	195713516-195713565	1q31.3c	Homo sapiens crumbs homolog 1 (Drosophila) (CRB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 10508521] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10508521] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	LCA8; RP12	LCA8; RP12
Homo sapiens	RefSeq	XM_377947.2	ILMN_42176	LOC402670	XM_377947.2	XM_377947.2		402670	89025256	XM_377947.2	LOC402670	XP_377947.2	ILMN_1710195	0002260014	A	83	TGGCTTCTCCGCACTCTCATGACCGATTGCCCTACATCTTGGCGCTCCCA	7	-	74705927-74705976		PREDICTED: Homo sapiens similar to opposite strand transcription unit to Stag3 (LOC402670), mRNA.					
Homo sapiens	RefSeq	NM_006179.4	ILMN_356657	NTF4	NM_006179.4	NM_006179.4		4909	169658373	NM_006179.4	NTF4	NP_006170.1	ILMN_3237085	0002570189	S	545	ACTTCTTTGAAACCCGCTGCAAGGCTGATAACGCTGAGGAAGGTGGCCCG	19	-	49564801-49564850	19q13.33a	Homo sapiens neurotrophin 4 (NTF4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence ISS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 1496419] [evidence TAS]		
Homo sapiens	RefSeq	NM_005586.2	ILMN_20004	MDFI	NM_005586.2	NM_005586.2		4188	13027633	NM_005586.2	MDFI	NP_005577.1	ILMN_1782798	0000780519	S	1221	AACACTGTGAAAGTTACTTGGGGAGGGTGGGCCGGTGGGGCCGTAGCTCT	6	+	41729622-41729671	6p21.1g	Homo sapiens MyoD family inhibitor (MDFI), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8797820] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence ISS]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence ISS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 8797820] [evidence TAS]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence ISS]; The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [pmid 8797820] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 43392] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]	I-MF	I-MF
Homo sapiens	RefSeq	NM_145113.1	ILMN_2124	MAX	NM_145113.1	NM_145113.1		4149	21704264	NM_145113.1	MAX	NP_660088.1	ILMN_1706546	0004640220	I	490	CTTTGTTCCTGGGGAATTCACTTCTCTTCCTCCCTCATGGAAGATGCAAG	14	-	65544072-65544121	14q23.3a	Homo sapiens MYC associated factor X (MAX), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8425218] [evidence TAS]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2006410] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2006410] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418410] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17157259] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418410] [evidence IPI]	MGC34679; MGC36767; MGC11225; MGC10775; orf1; MGC18164	MGC34679; MGC36767; MGC11225; MGC10775; orf1; MGC18164
Homo sapiens	RefSeq	NM_003009.2	ILMN_6755	SEPW1	NM_003009.2	NM_003009.2		6415	42544245	NM_003009.2	SEPW1	NP_003000.1	ILMN_2045994	0002970025	S	707	TCTTTGCATACCCCATGTCTTCCCCAGTTGTCCCCTGGAGTTTGGGGGGA	19	+	48287770-48287819	19q13.32c	Homo sapiens selenoprotein W, 1 (SEPW1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	selW	selW
Homo sapiens	RefSeq	XM_001719682.1	ILMN_343151	LOC100131960	XM_001719682.1	XM_001719682.1		100131960	169211713	XM_001719682.1	LOC100131960	XP_001719734.1	ILMN_3208811	0006130719	A	90	CACACAAATCCAGCCCCTGTCAGCTGGTGGCCTCACGCCAGTGTCTGAGT					PREDICTED: Homo sapiens hypothetical protein LOC100131960 (LOC100131960), mRNA.					
Homo sapiens	RefSeq	XM_941919.1	ILMN_35003	LOC652466	XM_941919.1	XM_941919.1		652466	89071517	XM_941919.1	LOC652466	XP_947012.1	ILMN_1731020	0001940066	S	90	TGCTCAGACCATCCCGCTGTTAGTGAGCTACTGTCTGGTCATGTGCTGGG					PREDICTED: Homo sapiens similar to vomeronasal 1 receptor, C3 (LOC652466), mRNA.					
Homo sapiens	RefSeq	NM_020327.2	ILMN_14555	ACVR1B	NM_020327.2	NM_020327.2		91	33598909	NM_020327.2	ACVR1B	NP_064732.2	ILMN_1766723	0006510717	I	1468	GCCTGATTTCTCCACCTTAGAAAAGGGTTTCTTGACAATGGGGTCAGGCC	12	+	50672078-50672083:50672084-50672127	12q13.13c	Homo sapiens activin A receptor, type IB (ACVR1B), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9032295] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12665502] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 11117535] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12065756] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9884026] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 12665502] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8622651] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [pmid 8397373] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11117535] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the activity of any activin receptor signaling pathway [goid 32927] [pmid 9884026] [evidence IMP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 12665502] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 8622651] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [pmid 9032295] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 12065756] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12065756] [evidence IDA]; Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals [goid 16361] [pmid 8622651] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [pmid 14517293] [evidence IPI]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 12065756] [evidence IDA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [evidence IEA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [pmid 12665502] [evidence IDA]	ACVRLK4; ALK4; SKR2; ACTRIB	ACVRLK4; ALK4; SKR2; ACTRIB
Homo sapiens	RefSeq	NM_182759.2	ILMN_3622	FAM19A3	NM_182759.2	NM_182759.2		284467	52486675	NM_182759.2	FAM19A3	NP_877436.1	ILMN_2318885	0003170053	A	867	GGCCACAGGGCATAGAAACAAGAGGTCACATTCAGCACCCACCACCTCCC	1	+	113071181-113071230	1p13.2c	Homo sapiens family with sequence similarity 19 (chemokine (C-C motif)-like), member A3 (FAM19A3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			TAFA3; MGC138473; RP11-426L16.6; TAFA-3	TAFA3; MGC138473; RP11-426L16.6; TAFA-3
Homo sapiens	RefSeq	NM_182759.2	ILMN_3622	FAM19A3	NM_182759.2	NM_182759.2		284467	52486675	NM_182759.2	FAM19A3	NP_877436.1	ILMN_1764364	0002100093	A	964	GGAAAACACTCTCCCCTTATGCCAGACCAGCAGTATCTCATTTGGATGGG	1	+	113071278-113071327	1p13.2c	Homo sapiens family with sequence similarity 19 (chemokine (C-C motif)-like), member A3 (FAM19A3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			TAFA3; MGC138473; RP11-426L16.6; TAFA-3	TAFA3; MGC138473; RP11-426L16.6; TAFA-3
Homo sapiens	RefSeq	NM_177965.2	ILMN_11118	C8ORF37	NM_177965.2	NM_177965.2		157657	31342620	NM_177965.2	C8orf37	NP_808880.1	ILMN_1676797	0004280470	S	1614	GCAGCACATTCAGGAAATCAGGTCCCTCAAAATTTCTAGCTCCCAACCCC	8	-	96328001-96328050	8q22.1c	Homo sapiens chromosome 8 open reading frame 37 (C8orf37), mRNA.				FLJ30600	FLJ30600
Homo sapiens	RefSeq	NM_177965.2	ILMN_11118	C8ORF37	NM_177965.2	NM_177965.2		157657	31342620	NM_177965.2	C8orf37	NP_808880.1	ILMN_2091084	0005360390	S	2165	AAATTTATTGAACCTGGGAGGCGGAGGTTGTAGTGAGCCAAGGTCGCGCC	8	-	96327450-96327499	8q22.1c	Homo sapiens chromosome 8 open reading frame 37 (C8orf37), mRNA.				FLJ30600	FLJ30600
Homo sapiens	RefSeq	XR_036855.1	ILMN_348682	LOC642406	XR_036855.1	XR_036855.1		642406	169177076	XR_036855.1	LOC642406		ILMN_3246497	0003710100	S	1893	GGTGACACCTATTATTTTGGAGAATGCTCCTGTGAATCCAAAGATTATGC	9	-	40480489-40480517:40481622-40481642	9p12b	PREDICTED: Homo sapiens misc_RNA (LOC642406), miscRNA.					
Homo sapiens	RefSeq	XM_001716511.1	ILMN_347345	LOC728940	XM_001716511.1	XM_001716511.1		728940	169201809	XM_001716511.1	LOC728940	XP_001716563.1	ILMN_3227213	0002260369	A	379	TGTACCTACCTGCGGAATGTCCTCTTCTGCATGAGTCCGCGTCGAGCTGG				10q24.31a	PREDICTED: Homo sapiens hypothetical LOC728940 (LOC728940), mRNA.					
Homo sapiens	RefSeq	NM_004242.2	ILMN_21974	HMGN3	NM_004242.2	NM_004242.2		9324	23238229	NM_004242.2	HMGN3	NP_004233.1	ILMN_2355004	0004180167	A	350	AGAGGTGCTAAAGGGAAGAAGGAGGAAAAGCAGGAAGCTGGAAAGGAAGG	6	-	79968751-79968800	6q14.1c	Homo sapiens high mobility group nucleosomal binding domain 3 (HMGN3), transcript variant 1, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 7776974] [evidence NAS]	PNAS-24; TRIP7; PNAS-25; DKFZp686E20226	PNAS-24; TRIP7; PNAS-25; DKFZp686E20226
Homo sapiens	RefSeq	NM_004623.2	ILMN_6668	TTC4	NM_004623.2	NM_004623.2		7268	39652617	NM_004623.2	TTC4	NP_004614.2	ILMN_1678140	0003060347	S	1810	TGGAGGACTGTGACAGACTTTGGACAGTGGCCTCTTGAGTTCCTCTGCAG	1	+	54980394-54980443	1p32.3b	Homo sapiens tetratricopeptide repeat domain 4 (TTC4), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC5097	MGC5097
Homo sapiens	RefSeq	NM_001007214.1	ILMN_16795	CACYBP	NM_001007214.1	NM_001007214.1		27101	60218912	NM_001007214.1	CACYBP	NP_001007215.1	ILMN_1705141	0005490634	I	131	CCTTCTTCTCGCGGAGGCTGAGAGACTAACCTTACACAACATGGCGGCCT	1	+	173235324-173235373	1q25.1b	Homo sapiens calcyclin binding protein (CACYBP), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	PNAS-107; MGC87971; SIP; S100A6BP; GIG5; RP1-102G20.6	PNAS-107; MGC87971; SIP; S100A6BP; GIG5; RP1-102G20.6
Homo sapiens	RefSeq	NM_032961.1	ILMN_26910	PCDH10	NM_032961.1	NM_032961.1		57575	14589915	NM_032961.1	PCDH10	NP_116586.1	ILMN_1688500	0005910093	I	3679	TCGGTGCTGGATGCCTTCTTTTGTCCCTTCTGATGGACGCCAGGCTGCTG	4	+	134084187-134084236	4q28.3d	Homo sapiens protocadherin 10 (PCDH10), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC133344; DKFZP761O2023; PCDH19; OL-PCDH; KIAA1400	MGC133344; DKFZP761O2023; PCDH19; OL-PCDH; KIAA1400
Homo sapiens	RefSeq	Hs.577890	ILMN_182331	LOC729485	XM_001127982.1	XM_001127982.1		729485	113424422	XM_001127982.1	LOC729485	XP_001127982.1	ILMN_1838949	0001500494	S	178	CGGCAGAGCTGAAGACAGAGACGTTGCAGCGACAAGGACAACTGGCATGC				13q31.1a-q31.1b	PREDICTED: Homo sapiens hypothetical LOC729485 (LOC729485), mRNA.					
Homo sapiens	RefSeq	NM_013445.3	ILMN_4673	GAD1	NM_013445.3	NM_013445.3		2571	58331244	NM_013445.3	GAD1	NP_038473.2	ILMN_1660973	0001440477	I	1156	TGCACACATGGTTTCCAAGGGTCTTCCTCCTAAATTTCCAGGGGCCTCCC	2	+	171407416-171407465	2q31.1c	Homo sapiens glutamate decarboxylase 1 (brain, 67kDa) (GAD1), transcript variant GAD25, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 10671565] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [pmid 10671565] [evidence NAS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways resulting in the formation of succinate from glutamate. Also known as GABA (gamma-aminobutyrate) shunt since it channels glutamate into the TCA cycle bypassing two steps of that cycle. There are three enzymes involved in the GABA shunt: glutamate decarboxylase (GAD), GABA aminotransferase (GABA-TA), and succinate semialdehyde dehydrogenase (SSADH). These three enzymes acting in concert to convert glutamate into succinate. The GABA shunt is predominantly associated with neurotransmission in the mammalian brain. It is also present in nonneuronal cells, in plants, in unicellular eukaryotes, and in prokaryotes [goid 6540] [pmid 1549570] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8954991] [evidence TAS];  [goid 18352] [pmid 10671565] [evidence TAS]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2 [goid 4351] [pmid 10671565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10671565] [evidence IPI]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	SCP; FLJ45882; GAD	SCP; FLJ45882; GAD
Homo sapiens	RefSeq	NM_013445.3	ILMN_4673	GAD1	NM_013445.3	NM_013445.3		2571	58331244	NM_013445.3	GAD1	NP_038473.2	ILMN_1812859	0000840059	A	922	GAGCAGATCCTGGTTGACTGCAGAGACACCTTGAAGTATGGGGTTCGCAC	2	+	171395897-171395946	2q31.1c	Homo sapiens glutamate decarboxylase 1 (brain, 67kDa) (GAD1), transcript variant GAD25, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 10671565] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [pmid 10671565] [evidence NAS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways resulting in the formation of succinate from glutamate. Also known as GABA (gamma-aminobutyrate) shunt since it channels glutamate into the TCA cycle bypassing two steps of that cycle. There are three enzymes involved in the GABA shunt: glutamate decarboxylase (GAD), GABA aminotransferase (GABA-TA), and succinate semialdehyde dehydrogenase (SSADH). These three enzymes acting in concert to convert glutamate into succinate. The GABA shunt is predominantly associated with neurotransmission in the mammalian brain. It is also present in nonneuronal cells, in plants, in unicellular eukaryotes, and in prokaryotes [goid 6540] [pmid 1549570] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8954991] [evidence TAS];  [goid 18352] [pmid 10671565] [evidence TAS]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2 [goid 4351] [pmid 10671565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10671565] [evidence IPI]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	SCP; FLJ45882; GAD	SCP; FLJ45882; GAD
Homo sapiens	RefSeq	NM_175067.1	ILMN_6533	TAAR6	NM_175067.1	NM_175067.1		319100	28173557	NM_175067.1	TAAR6	NP_778237.1	ILMN_1694077	0001010070	S	528	GCTGGAGGAATTATCTGATGCCCTAAACTGTATAGGAGGTTGTCAGACCG	6	+	132891988-132892037	6q23.2b	Homo sapiens trace amine associated receptor 6 (TAAR6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	TA4; TRAR4; RP11-295F4.3; SCZD5	TA4; SCZD5; TRAR4; RP11-295F4.3
Homo sapiens	RefSeq	NM_001020.4	ILMN_3511	RPS16	NM_001020.4	NM_001020.4		6217	71482588	NM_001020.4	RPS16	NP_001011.1	ILMN_1651850	0006450553	S	496	GCGCTCGCTACCAGAAATCCTACCGATAAGCCCATCGTGACTCAAAACTC	19	-	44615731-44615752:44615753-44615780	19q13.2a	Homo sapiens ribosomal protein S16 (RPS16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 2016298] [evidence NAS]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 8706699] [evidence IDA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 17881366] [evidence IDA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_017546.3	ILMN_7684	C2ORF29	NM_017546.3	NM_017546.3		55571	40538808	NM_017546.3	C2orf29	NP_060016.2	ILMN_1708906	0005700523	S	2389	GAGAAGTAGGAGAGCAGGGTGGTACCGTGTGGGCTCTTACCCTTTATGTG	2	+	101253114-101253163	2q11.2e	Homo sapiens chromosome 2 open reading frame 29 (C2orf29), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10497265] [evidence ND ]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10497265] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10497265] [evidence ND ]	C40	C40
Homo sapiens	RefSeq	NR_002960.1	ILMN_181545	SNORA20	NR_002960.1	NR_002960.1		677806	91680828	NR_002960.1	SNORA20		ILMN_3245228	0001050575	S	31	CAGTGATACGAGCAGTTATACGCATGGGATAAAATAACATTGGGCCACTG	6	-	160201333-160201382	6q25.3f	Homo sapiens small nucleolar RNA, H/ACA box 20 (SNORA20), small nucleolar RNA.				ACA20	ACA20
Homo sapiens	RefSeq	XM_938779.1	ILMN_31111	LOC653972	XM_938779.1	XM_938779.1		653972	89038888	XM_938779.1	LOC653972	XP_943872.1	ILMN_1697665	0006940678	S	323	AAAAATATTTCCTGACTTCGGATGTGGCTTGAGCTGTAGGCGCGGAGGGC					PREDICTED: Homo sapiens similar to chromobox homolog 3 (LOC653972), mRNA.					
Homo sapiens	RefSeq	NM_018464.2	ILMN_4843	CISD1	NM_018464.2	NM_018464.2		55847	50355973	NM_018464.2	CISD1	NP_060934.1	ILMN_2122953	0006220441	S	505	GAATGACTACCACCTCTGTCTGATTCACCTTCGCTGGATTCTAAATGTGG	10	+	59717475-59717524	10q21.1e	Homo sapiens CDGSH iron sulfur domain 1 (CISD1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	C10orf70; MDS029; mitoNEET; ZCD1; MGC14684	C10orf70; MDS029; mitoNEET; ZCD1; MGC14684
Homo sapiens	RefSeq	NM_018464.2	ILMN_4843	CISD1	NM_018464.2	NM_018464.2		55847	50355973	NM_018464.2	CISD1	NP_060934.1	ILMN_2122952	0000020392	S	302	CATGGAGGATTTGGGAGATAAAGCTGTGTACTGCCGTTGTTGGAGGTCCA	10	+	59707034-59707083	10q21.1e	Homo sapiens CDGSH iron sulfur domain 1 (CISD1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	C10orf70; MDS029; mitoNEET; ZCD1; MGC14684	C10orf70; MDS029; mitoNEET; ZCD1; MGC14684
Homo sapiens	RefSeq	XM_945289.1	ILMN_46650	LOC652209	XM_945289.1	XM_945289.1		652209	89034650	XM_945289.1	LOC652209	XP_950382.1	ILMN_1759332	0003710110	S	233	GTGAGGAAGAAGAGGTTTCCTGGGAGAAAGCACTCGAGGAGCAATAGGTG					PREDICTED: Homo sapiens hypothetical protein LOC652209 (LOC652209), mRNA.					
Homo sapiens	RefSeq	XM_932981.1	ILMN_36064	LOC645581	XM_932981.2	XM_932981.2		645581	113422296	XM_932981.2	LOC645581	XP_938074.1	ILMN_1699182	0001410477	S	46	GAAGGACCAAGACAACATCATCCTTCAGAGGTCACTGAGCGGCAGCTTGC	11	-	22836143-22836148:22837574-22837617	11p14.3c	PREDICTED: Homo sapiens similar to mCG19417 (LOC645581), mRNA.					
Homo sapiens	RefSeq	NM_005028.4	ILMN_6957	PIP4K2A	NM_005028.4	NM_005028.4		5305	156416001	NM_005028.4	PIP4K2A	NP_005019.2	ILMN_3236637	0001410037	S	3210	CACAGAGTCTTTGGAAGCCAGCAGTCGTGCCCTCCGTATACTGTCCACTC	10	-	22865085-22865134	10p12.2a	Homo sapiens phosphatidylinositol-5-phosphate 4-kinase, type II, alpha (PIP4K2A), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence NAS]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [pmid 7639683] [evidence NAS]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16309] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PIP5KII-alpha; PIP5K2A; PIPK; FLJ13267; PIP5KIIA	PIP5KII-alpha; PIPK
Homo sapiens	RefSeq	NM_213612.1	ILMN_19383	SLC25A3	NM_213612.1	NM_213612.1		5250	47132596	NM_213612.1	SLC25A3	NP_998777.1	ILMN_1788498	0000990762	I	502	CTTCGTGACCTCCGTGTGCCCGAGGGAAGAGAGGCCGTGACTAGCTCTTT	12	+	97512269-97512318	12q23.1c	Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 (SLC25A3), nuclear gene encoding mitochondrial protein, transcript variant 4, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8168843] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 8144629] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8144629] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 8168843] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 1777677] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8144629] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphate (cyt) + H+ (cyt) = phosphate (mitochondrion) + H+ (mitochondrion) [goid 15320] [pmid 8144629] [evidence TAS]	OK/SW-cl.48; PHC	OK/SW-cl.48; PHC
Homo sapiens	RefSeq	NM_014672.2	ILMN_30096	KIAA0391	NM_014672.2	NM_014672.2		9692	62988275	NM_014672.2	KIAA0391	NP_055487.2	ILMN_1701512	0006560427	S	2437	CTGACCTTGCCTTCCAGGCCTACCAATAGCAGAATCAATCCATCTGTCCC	14	+	34812848-34812897	14q13.2a	Homo sapiens KIAA0391 (KIAA0391), mRNA.					
Homo sapiens	RefSeq	XR_017807.2	ILMN_178153	LOC401433	XR_017807.2	XR_017807.2		401433	169172002	XR_017807.2	LOC401433		ILMN_3279640	0005900088	M	1891	TGAAGAGCTAGTCACCCAGACACTTTCAACACCTACAGCTGGGGAGGCTG				7q36.1d	PREDICTED: Homo sapiens misc_RNA (LOC401433), miscRNA.					
Homo sapiens	RefSeq	XM_932975.1	ILMN_31666	LOC653269	XM_928585.2	XM_928585.2		653269	113413196	XM_928585.2	LOC653269	XP_933678.1	ILMN_1770042	0001770093	A	2020	CATGCTAAGACTGGAGCTAGACACAATGAAACATCAGAGCCAGCTAAGAA	2	-	130938069-130938118	2q21.1c	PREDICTED: Homo sapiens similar to protein expressed in prostate, ovary, testis, and placenta 2, transcript variant 2 (LOC653269), mRNA.					
Homo sapiens	RefSeq	XM_928753.1	ILMN_44944	LOC645743	XM_928753.1	XM_928753.1		645743	89027844	XM_928753.1	LOC645743	XP_933846.1	ILMN_1721115	0004850110	S	814	GTCCTGCCCAGACCTGCGGTCCCATCAGTCAACTCTGTTTCGGAGACGTA	8	-	7668621-7668670		PREDICTED: Homo sapiens hypothetical protein LOC645743 (LOC645743), mRNA.					
Homo sapiens	RefSeq	NM_003559.3	ILMN_175255	PIP4K2B	NM_003559.4	NM_003559.4		8396	117938278	NM_003559.4	PIP4K2B	NP_003550.1	ILMN_1701213	0004610494	I	3514	CCCAGGAAGGGGCCATAGGTAGGTCTGAACAACTGCCGCAAGACCACTAC	17	-	36924112-36924161	17q12c	Homo sapiens phosphatidylinositol-5-phosphate 4-kinase, type II, beta (PIP4K2B), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9038203] [evidence TAS]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 5057] [pmid 9038203] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [pmid 9038203] [evidence IDA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16309] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Pip4k2B; PIP5K2B; PIP5KIIbeta; PIP5KIIB	Pip4k2B; PIP5KIIB
Homo sapiens	RefSeq	NM_138687.1	ILMN_175255	PIP4K2B	NM_003559.4	NM_003559.4		8396	117938278	NM_003559.4	PIP4K2B	NP_003550.1	ILMN_1741017	0000270546	A	1135	GGGTTCTACGGTTGCCAGAGAAGCGAGCGACAAGGAGAAGGCCAAGGACT	17	-	36934043-36934053:36934587-36934625	17q12c	Homo sapiens phosphatidylinositol-5-phosphate 4-kinase, type II, beta (PIP4K2B), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9038203] [evidence TAS]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 5057] [pmid 9038203] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16308] [pmid 9038203] [evidence IDA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 5-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate [goid 16309] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	Pip4k2B; PIP5K2B; PIP5KIIbeta; PIP5KIIB	Pip4k2B; PIP5KIIB
Homo sapiens	RefSeq	XM_937622.1	ILMN_40226	KIAA1843	XM_937622.1	XM_937622.1		84540	88959078	XM_937622.1	KIAA1843	XP_942715.1	ILMN_1689601	0001340181	A	9305	CTTCAAGTTGCGCTGAGAGTTGAGGGCTGCCAGTTGGAGAGTGGGGTGGC					PREDICTED: Homo sapiens KIAA1843 protein (KIAA1843), mRNA.					
Homo sapiens	RefSeq	NM_001005285.1	ILMN_20888	OR2AT4	NM_001005285.1	NM_001005285.1		341152	52627216	NM_001005285.1	OR2AT4	NP_001005285.1	ILMN_1779412	0006510491	S	669	TGTCCACATCCTGGCCTCAGTGCTTCGCATCAGTTCCCTAGAAGGACGGG	11	-	74800040-74800089	11q13.4c	Homo sapiens olfactory receptor, family 2, subfamily AT, member 4 (OR2AT4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-265	OR11-265
Homo sapiens	RefSeq	NM_006691.2	ILMN_164382	LYVE1	NM_006691.3	NM_006691.3		10894	151301201	NM_006691.3	LYVE1	NP_006682.2	ILMN_1808114	0004850180	S	1709	TCCCACCTGACATGTCCTTCTGAGCCCGGTAAGAGCAAAAGAATGGCAGA	11	-	10580154-10580203	11p15.4a	Homo sapiens lymphatic vessel endothelial hyaluronan receptor 1 (LYVE1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10037799] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10037799] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars [goid 6027] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10037799] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 10037799] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 10037799] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10037799] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]	CRSBP-1; XLKD1; LYVE-1; HAR	CRSBP-1; LYVE-1; HAR
Homo sapiens	RefSeq	XM_937397.1	ILMN_38334	ANKRD31	XM_927671.2	XM_927671.2		256006	113416653	XM_927671.2	ANKRD31	XP_932764.2	ILMN_1708056	0006100315	A	3205	CCTGAGCAAAATTCCCTGGCTTGTATGAGAACACTTTTGACACATGAGGC	5	-	74477929-74477978	5q13.3b	PREDICTED: Homo sapiens ankyrin repeat domain 31 (ANKRD31), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	NM_017941.3	ILMN_21070	C17ORF80	NM_017941.3	NM_017941.3		55028	34222156	NM_017941.3	C17orf80	NP_060411.2	ILMN_1762071	0001430678	S	1965	AAGCCTTCGTGACTTCTCTCTAGTGCCTTCGTGCCCTGTGTTGCCCACTG	17	+	68755096-68755145	17q25.1a	Homo sapiens chromosome 17 open reading frame 80 (C17orf80), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ20721; HLC-8; MIG3	FLJ20721; HLC-8; MIG3
Homo sapiens	RefSeq	NM_006870.3	ILMN_13158	DSTN	NM_006870.3	NM_006870.3		11034	58530846	NM_006870.3	DSTN	NP_006861.1	ILMN_2380698	0003190634	A	1528	AGCTAGGACACCTGTGGTATCTTTAATTGTATCTCCTTCAGAAGTTTGCT	20	+	17536566-17536615	20p12.1a	Homo sapiens destrin (actin depolymerizing factor) (DSTN), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IEA]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 8399167] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of actin depolymerization [goid 30836] [evidence IEA]; The process by which an actin filament is broken down into smaller filaments [goid 51014] [pmid 8399167] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	ACTDP; bA462D18.2; ADF	ACTDP; bA462D18.2; ADF
Homo sapiens	RefSeq	XM_001717652.1	ILMN_333984	LOC728741	XM_001717652.1	XM_001717652.1		728741	169209900	XM_001717652.1	LOC728741	XP_001717704.1	ILMN_3234920	0000830671	S	448	CGGCGGGCAGAGGACTACCACAAATGCAAAATCCCCCCTTCTGCAAGAAA	16	+	28689441-28689470:28689580-28689599	16p11.2e	PREDICTED: Homo sapiens hypothetical LOC728741 (LOC728741), mRNA.					
Homo sapiens	RefSeq	NM_152577.1	ILMN_9234	ZNF645	NM_152577.2	NM_152577.2		158506	142371555	NM_152577.2	ZNF645	NP_689790.1	ILMN_1811098	0002350725	S	1221	CTGCATGGAAACGACTGTCACCTTGTCCACCAACGCGGAGTCCACCTCCT	X	+	22202201-22202250	Xp22.11b	Homo sapiens zinc finger protein 645 (ZNF645), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HAKAIL; FLJ25735	HAKAIL; FLJ25735
Homo sapiens	RefSeq	XM_001722233.1	ILMN_339869	LOC100128728	XM_001722233.1	XM_001722233.1		100128728	169172382	XM_001722233.1	LOC100128728	XP_001722285.1	ILMN_3258717	0002710181	M	448	AGGAGGTCCAGCACTCGCAATTCCCTGGTGGCAGAAGGTGGGGCTGTCCT				8p23.1b	PREDICTED: Homo sapiens hypothetical protein LOC100128728 (LOC100128728), mRNA.					
Homo sapiens	RefSeq	NM_020433.4	ILMN_15587	JPH2	NM_020433.4	NM_020433.4		57158	61699223	NM_020433.4	JPH2	NP_065166.2	ILMN_1717519	0006250128	I	4325	CAGGCAGCTCTGGGACCTAGGAGTTTGCTTCTGATAGGGTCAGCTTTCCC	20	-	42740747-42740796	20q13.12a	Homo sapiens junctophilin 2 (JPH2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; The lipid bilayer surrounding the sarcoplasmic reticulum [goid 33017] [evidence IEA]	Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	JP2; JP-2; FLJ40969	JP2; JP-2; FLJ40969
Homo sapiens	RefSeq	NM_001004475.1	ILMN_26627	OR10T2	NM_001004475.1	NM_001004475.1		128360	52218845	NM_001004475.1	OR10T2	NP_001004475.1	ILMN_1724873	0003420722	S	796	TCTGCCTCAGACAAGGATCAGTTGGTGGCAGTGACCTACACAGTGGTTAC	1	-	158368411-158368460	1q23.1f	Homo sapiens olfactory receptor, family 10, subfamily T, member 2 (OR10T2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-3	OR1-3
Homo sapiens	RefSeq	XM_932052.1	ILMN_44080	LOC644222	XM_932052.2	XM_932052.2		644222	113423348	XM_932052.2	LOC644222	XP_937145.1	ILMN_1678553	0004860523	S	328	GCTCCTCAAAATGTGACTTCAGAGCCAGCAGCATTGGCATCCCTGGAAGC	12	+	52848388-52848437	12q13.13f	PREDICTED: Homo sapiens hypothetical LOC644222 (LOC644222), mRNA.					
Homo sapiens	RefSeq	NM_006328.2	ILMN_16867	RBM14	NM_006328.2	NM_006328.2		10432	50593004	NM_006328.2	RBM14	NP_006319.1	ILMN_1700604	0006660343	S	2667	GCGGCACAGTCCCACTTCCCCATCTCCCCAAGTAGGTGGTGTTAGAAAAC	11	+	66151277-66151326	11q13.1e	Homo sapiens RNA binding motif protein 14 (RBM14), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 11443112] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 11443112] [evidence IPI]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [pmid 11443112] [evidence TAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 11443112] [evidence NAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 11443112] [evidence NAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 11443112] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [pmid 11443112] [evidence TAS]; The modification of histones by removal of acetyl groups [goid 16575] [pmid 11443112] [evidence IPI]; Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [pmid 11443112] [evidence NAS]; Any series of molecular signals generated as a consequence of a glucocorticoid binding to its receptor [goid 42921] [pmid 11443112] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 11443112] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11443112] [evidence NAS]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 11443112] [evidence NAS];  [goid 30374] [pmid 11443112] [evidence IPI]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 11443112] [evidence NAS]	SYTIP1; COAA; SIP; DKFZp779J0927	SYTIP1; COAA; SIP; DKFZp779J0927
Homo sapiens	RefSeq	NM_015373.3	ILMN_26075	CBY1	NM_015373.3	NM_015373.3		25776	50959116	NM_015373.3	CBY1	NP_056188.1	ILMN_2399571	0004280039	A	482	CTGGATGAACTGAGGATCAGCCGGAAGAGAAAATGAAGACCCCAGAGACA	22	+	37399152-37399187:37399188-37399201	22q13.1c	Homo sapiens chibby homolog 1 (Drosophila) (CBY1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12712206] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 15194699] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 15194699] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [pmid 12712206] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [pmid 12712206] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 12712206] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [pmid 12712206] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15194699] [evidence IPI]	PGEA1; arb1; HS508I15A; PIGEA14; C22orf2; CBY; PIGEA-14	PGEA1; arb1; HS508I15A; PIGEA14; C22orf2; CBY; PIGEA-14
Homo sapiens	RefSeq	NM_001002880.1	ILMN_26075	CBY1	NM_015373.3	NM_015373.3		25776	50959116	NM_015373.3	CBY1	NP_056188.1	ILMN_1730879	0000510100	A	832	GCTCTGTTGGGTTGTGTTGGGAGAAGCGGCTGGAGTTCATTCTCTCACCC	22	+	37399502-37399551	22q13.1c	Homo sapiens chibby homolog 1 (Drosophila) (CBY1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12712206] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 15194699] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 15194699] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [pmid 12712206] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [pmid 12712206] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 12712206] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [pmid 12712206] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15194699] [evidence IPI]	PGEA1; arb1; HS508I15A; PIGEA14; C22orf2; CBY; PIGEA-14	PGEA1; arb1; HS508I15A; PIGEA14; C22orf2; CBY; PIGEA-14
Homo sapiens	RefSeq	XM_940588.1	ILMN_31337	LOC654187	XM_940588.1	XM_940588.1		654187	89040663	XM_940588.1	LOC654187	XP_945681.1	ILMN_1799699	0006100270	S	2192	CTCCTGCCTCCTTTCTTCCCCGTTCTGCCACAGTCAACCTGACCATCCAC					PREDICTED: Homo sapiens similar to CG11064-PA (LOC654187), mRNA.					
Homo sapiens	RefSeq	NM_001008213.1	ILMN_23644	OPTN	NM_001008213.1	NM_001008213.1		10133	56549110	NM_001008213.1	OPTN	NP_001008214.1	ILMN_2381899	0005260215	A	3417	CTGGAGCCCAGTATGTGCTGTGTGAGTTAGAAGTCATTCTTGCTGAGAAG	10	+	13180111-13180160	10p13e	Homo sapiens optineurin (OPTN), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9488477] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15837803] [evidence IDA]	The process of directing proteins towards the Golgi using signals contained within the protein [goid 42] [pmid 15837803] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [pmid 15837803] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9488477] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 9488477] [evidence TAS]; The directed movement of proteins from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane [goid 43001] [pmid 15837803] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 15837803] [evidence IPI]	FIP2; HYPL; NRP; TFIIIA-INTP; HIP7; GLC1E	FIP2; HYPL; NRP; TFIIIA-INTP; HIP7; GLC1E
Homo sapiens	RefSeq	NR_003951.1	ILMN_345835	ADAM21P	NR_003951.1	NR_003951.1		145241	158186694	NR_003951.1	ADAM21P		ILMN_3241313	0005310202	S	1969	GGTACTGTGTGTGGCCCAGGAAAGATCTGCATCCACAAGAAGTGTCAGTC	14	-	70712500-70712549	14q24.2a	Homo sapiens ADAM metallopeptidase domain 21 pseudogene (ADAM21P), non-coding RNA.					
Homo sapiens	RefSeq	NM_052965.1	ILMN_16022	C1ORF19	NM_052965.1	NM_052965.1		116461	24308389	NM_052965.1	C1orf19	NP_443197.1	ILMN_1734486	0003870112	S	1605	GTGGTGCCATAGTTTGTCATCCCTGGGTCTAGGAAATAGTCAATAAACAG	1	+	182309649-182309698	1q25.3e	Homo sapiens chromosome 1 open reading frame 19 (C1orf19), mRNA.				sen15	sen15
Homo sapiens	RefSeq	XM_001719847.1	ILMN_344657	LOC100128908	XM_001719847.1	XM_001719847.1		100128908	169207009	XM_001719847.1	LOC100128908	XP_001719899.1	ILMN_3187648	0001470220	A	1950	TAGCTGGGCCTCCAGGACACTCTCTGGGGAAGGAACAGCAAGAAGGGCTA	14	-	22639945-22639994	14q11.2f	PREDICTED: Homo sapiens hypothetical protein LOC100128908 (LOC100128908), mRNA.					
Homo sapiens	RefSeq	NM_016070.2	ILMN_18089	MRPS23	NM_016070.2	NM_016070.2		51649	16554603	NM_016070.2	MRPS23	NP_057154.2	ILMN_1687359	0002680754	S	536	GAAGTTCCACAGGACCAGCATTTGGAGGCACCTGCAGACCAGTCGAAAGG	17	-	55917159-55917208	17q22d	Homo sapiens mitochondrial ribosomal protein S23 (MRPS23), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]			HSPC329; MRP-S23; CGI-138	HSPC329; MRP-S23; CGI-138
Homo sapiens	RefSeq	NM_145807.1	ILMN_27382	NTN5	NM_145807.1	NM_145807.1		126147	24308064	NM_145807.1	NTN5	NP_665806.1	ILMN_3248035	0001580270	S	1554	GCCGGAGCACTAGACGTGAGATGGGGCTGCCTCGAGCACCAACAAAGTAA	19	-	53856708-53856745:53856746-53856757	19q13.33a	Homo sapiens netrin 5 (NTN5), mRNA.					
Homo sapiens	RefSeq	NM_145807.1	ILMN_27382	NTN5	NM_145807.1	NM_145807.1		126147	24308064	NM_145807.1	NTN5	NP_665806.1	ILMN_1767343	0006980228	S	1645	CACTGCAGAGAGCCAATCAGACGTCGCAGAGCCCCGACGACACTATGCTT	19	-	53856617-53856666	19q13.33a	Homo sapiens netrin 5 (NTN5), mRNA.					
Homo sapiens	RefSeq	NM_015210.1	ILMN_22877	KIAA0802	NM_015210.1	NM_015210.1		23255	47271353	NM_015210.1	KIAA0802	NP_056025.1	ILMN_1705562	0007330673	S	4941	TAGCTCCATCCCTAGAGCCCTGCTTCTCCAGGCCCGAGAGACCAGCAAAC	18	+	8821624-8821673	18p11.22c	Homo sapiens KIAA0802 (KIAA0802), mRNA.					
Homo sapiens	RefSeq	XR_038228.1	ILMN_347751	LOC441481	XR_038228.1	XR_038228.1		441481	169216160	XR_038228.1	LOC441481		ILMN_3213925	0003840474	A	369	TTCGAGAAGGGCGAGGTGAACGGTGCGGGGGCGCACACTCTCTTTGCCTT				Xp22.2	PREDICTED: Homo sapiens misc_RNA (LOC441481), miscRNA.					
Homo sapiens	RefSeq	NM_020648.3	ILMN_25062	TWSG1	NM_020648.3	NM_020648.3		57045	21314788	NM_020648.3	TWSG1	NP_065699.1	ILMN_1726967	0004010451	S	1592	CACTAGGGATGGGGAACGAATGCCAAATCAGACTCCACCTAGAGCACCAG	18	+	9390340-9390389	18p11.22b	Homo sapiens twisted gastrulation homolog 1 (Drosophila) (TWSG1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of BMP signaling pathway activity [goid 30513] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TSG	TSG
Homo sapiens	Unigene	Hs.575085	ILMN_127266	HS.575085	Hs.575085		Hs.575085		83105874	DB336481			ILMN_1903345	0001430255	S	154	CATCACAGTTCCACCTCTCAAACTGTAGGCTGGGGAGGGGGACTTACTAT	4	-	61703331-61703380		DB336481 TESTI2 Homo sapiens cDNA clone TESTI2007279 3, mRNA sequence					
Homo sapiens	RefSeq	XM_934895.1	ILMN_38057	LOC440421	XM_934895.1	XM_934895.1		440421	89041313	XM_934895.1	LOC440421	XP_939988.1	ILMN_1795520	0004050162	I	877	TCACCTTAGAGGGCTTCCCTGTCTGCAGAGCCCTGATCCTTGGGGTCTAG	17	-	25920565-25920614		PREDICTED: Homo sapiens similar to keratin 17, transcript variant 3 (LOC440421), mRNA.					
Homo sapiens	RefSeq	XM_940320.1	ILMN_41427	LOC651195	XM_940320.1	XM_940320.1		651195	88947795	XM_940320.1	LOC651195	XP_945413.1	ILMN_1798809	0001410382	S	2459	CGAGGAGGTCTGAAGAGCTGAGGTCCAGTGGGAAGCTAGTCCACCACCTT					PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, receptor type, U isoform 2 precursor (LOC651195), mRNA.					
Homo sapiens	RefSeq	NM_006378.2	ILMN_24615	SEMA4D	NM_006378.2	NM_006378.2		10507	33942063	NM_006378.2	SEMA4D	NP_006369.2	ILMN_1687533	0004880408	S	4324	GGCGCTGTTCCTGCCACTGTCCTGAAGATGTGAATGGGTGGTACGATTTC	9	-	91182226-91182275	9q22.2a	Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D (SEMA4D), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 8876214] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8876214] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8876214] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 15613544] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 11254688] [evidence IDA]	SEMAJ; M-sema G; M-sema-G; coll-4; CD100	SEMAJ; M-sema G; M-sema-G; coll-4; CD100
Homo sapiens	RefSeq	XM_938444.1	ILMN_34840	LOC649374	XM_938444.1	XM_938444.1		649374	89025995	XM_938444.1	LOC649374	XP_943537.1	ILMN_1663259	0004040446	S	7557	GTCTAGAGAAGAGGCACGTCAGCAGCCTGTACACACCCAGTCACACCTGT					PREDICTED: Homo sapiens hypothetical protein LOC649374 (LOC649374), mRNA.					
Homo sapiens	RefSeq	XM_001717252.1	ILMN_344243	LOC100133377	XM_001717252.1	XM_001717252.1		100133377	169169212	XM_001717252.1	LOC100133377	XP_001717304.1	ILMN_3243006	0002940156	S	327	AGCATCAGCATTGCCTGGGGACTTGTTAGAAATGCAGAATCCTGGGCCCC	6	+	31981444-31981493		PREDICTED: Homo sapiens hypothetical protein LOC100133377 (LOC100133377), mRNA.					
Homo sapiens	RefSeq	NM_203418.1	ILMN_15847	RCAN1	NM_203418.1	NM_203418.1		1827	44680109	NM_203418.1	RCAN1	NP_981963.1	ILMN_1712112	0000620239	I	145	CTCTTGGAAAGGAATCTCACTAGGGGCTTGACTGCGTGGGTCTGTAGCGC	21	-	35899067-35899116	21q22.12a	Homo sapiens regulator of calcineurin 1 (RCAN1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8595418] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8595418] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8595418] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8595418] [evidence TAS]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8595418] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15935327] [evidence IPI]	ADAPT78; MCIP1; DSC1; CSP1; DSCR1; RCN1	ADAPT78; MCIP1; DSC1; CSP1; DSCR1; RCN1
Homo sapiens	RefSeq	NM_003328.1	ILMN_19719	TXK	NM_003328.2	NM_003328.2		7294	148596973	NM_003328.2	TXK	NP_003319.2	ILMN_1741143	0001190138	S	2309	GTAGCCAAAGCTCACCTTTGAACAGATCCCGGTGACATTCTATTTCCAGG	4	-	48068965-48069014	4p12a	Homo sapiens TXK tyrosine kinase (TXK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7951233] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 7951233] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC22473; PSCTK5; PTK4; BTKL; TKL; RLK	PSCTK5; PTK4; BTKL; TKL; RLK
Homo sapiens	RefSeq	NM_001008404.1	ILMN_27449	C14ORF180	NM_001008404.1	NM_001008404.1		400258	56605683	NM_001008404.1	C14orf180	NP_001008404.1	ILMN_1693951	0004670066	S	1551	GACCGTCTGTGGTTGTGGCTTTGTCGCCGGATTGCAGAGCTGAAGGGAGC	14	+	104126932-104126981	14q32.33b	Homo sapiens chromosome 14 open reading frame 180 (C14orf180), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ38594	FLJ38594
Homo sapiens	RefSeq	NM_013411.3	ILMN_19751	AK2	NM_013411.3	NM_013411.3		204	77157796	NM_013411.3	AK2	NP_037543.1	ILMN_1655645	0003140441	I	3374	AGTGACCAAGATACTCATGTGGGTTGGACTGCCCAGGACACAGCAGATGC	1	-	33473768-33473817	1p35.1b	Homo sapiens adenylate kinase 2 (AK2), transcript variant AK2B, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 6182143] [evidence EXP]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [pmid 9504408] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate [goid 19206] [pmid 6182143] [evidence EXP]	ADK2	ADK2
Homo sapiens	RefSeq	XM_001719039.1	ILMN_336025	LOC100131988	XM_001719039.1	XM_001719039.1		100131988	169205606	XM_001719039.1	LOC100131988	XP_001719091.1	ILMN_3276933	0000460377	M	655	CAGCATCTCAAAGAACCCGGATGGACTGTATATATAGTGGAGAGGGGGTG				12q24.31a	PREDICTED: Homo sapiens hypothetical LOC100131988 (LOC100131988), mRNA.					
Homo sapiens	RefSeq	NM_178502.2	ILMN_10045	DTX3	NM_178502.2	NM_178502.2		196403	31341899	NM_178502.2	DTX3	NP_848597.1	ILMN_1658677	0006250092	S	1728	AAGGGAGGGTCTCTTGATTCCTAACCGCCCCCACATACTGCTCCACCGCT	12	+	56289549-56289598	12q13.3b	Homo sapiens deltex homolog 3 (Drosophila) (DTX3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ34766; MGC138863; MGC138864; RNF154	FLJ34766; MGC138863; MGC138864; RNF154
Homo sapiens	RefSeq	NM_175077.1	ILMN_29065	SLA2	NM_175077.1	NM_175077.1		84174	28416423	NM_175077.1	SLA2	NP_778252.1	ILMN_1673357	0004230671	A	2178	GGTGCTAAGCCCTCTCTCCACAATGCCAAGACGGAGACCACAGCCTACAC	20	-	35241139-35241188	20q11.23a	Homo sapiens Src-like-adaptor 2 (SLA2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11696592] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11891219] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 11696592] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 11696592] [evidence IDA]; Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells [goid 19724] [pmid 11891219] [evidence TAS]; Any series of molecular signals initiated by a ligand entering the target cell, where it binds to an intracellular receptor [goid 30522] [pmid 11891219] [evidence TAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 11891219] [evidence TAS]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [pmid 11696592] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of calcium-mediated signaling [goid 50849] [pmid 11696592] [evidence IDA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell [goid 50851] [pmid 11696592] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of B cell activation [goid 50869] [pmid 11891219] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 11891219] [evidence IDA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11891219] [evidence IPI]	FLJ21992; MGC49845; SLAP2; C20orf156; SLAP-2	FLJ21992; MGC49845; SLAP2; C20orf156; SLAP-2
Homo sapiens	Unigene	Hs.116157	ILMN_75340	HS.116157	Hs.116157		Hs.116157		27847924	BX108566			ILMN_1818479	0004060059	S	405	GAAAACGCGGCCCAAATGTGCTGGGAGGAGAAGCCAGTGGATCTAGGAGG	10	+	125716531-125716580		BX108566 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998K171830, mRNA sequence					
Homo sapiens	RefSeq	NM_013249.1	ILMN_183638	ZNF214	NM_013249.1	NM_013249.1		7761	7019580	NM_013249.1	ZNF214	NP_037381.1	ILMN_2082109	0003140333	S	2469	CTGGTTGGCCAACTGTTAAACAACATCTCTTAACTCCCCTAAAAACTCCC	11	-	6977229-6977278	11p15.4b	Homo sapiens zinc finger protein 214 (ZNF214), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10762538] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BAZ1	BAZ1
Homo sapiens	RefSeq	XM_943493.1	ILMN_41836	LOC648876	XM_943493.1	XM_943493.1		648876	88998886	XM_943493.1	LOC648876	XP_948586.1	ILMN_1692716	0004670647	S	454	AAAGGTACCTGGTGGGGTCTGCTGCACATGCCCCTTGTCCAGAGGGAGCT					PREDICTED: Homo sapiens hypothetical protein LOC648876 (LOC648876), mRNA.					
Homo sapiens	RefSeq	NM_207398.1	ILMN_26320	GBP7	NM_207398.1	NM_207398.1		388646	46409419	NM_207398.1	GBP7	NP_997281.1	ILMN_2052172	0004850026	S	1609	TAAGCAGGCTAAGAAGGAGGCAGCTGAAAAGGAACAGGAGCTGCTAAGAC	1	-	89371671-89371720	1p22.2c	Homo sapiens guanylate binding protein 7 (GBP7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	GBP4L; FLJ38822	GBP4L; FLJ38822
Homo sapiens	RefSeq	XM_001715726.1	ILMN_340937	LOC100129035	XM_001715726.1	XM_001715726.1		100129035	169179403	XM_001715726.1	LOC100129035	XP_001715778.1	ILMN_3259977	0002030435	M	133	GACCCGCGAGGCTCTTAAAGGAGCCGCGTCGCGGGATCCAACGAGGGCAC				9q34.11c	PREDICTED: Homo sapiens hypothetical LOC100129035 (LOC100129035), mRNA.					
Homo sapiens	RefSeq	NM_024119.1	ILMN_1778	DHX58	NM_024119.2	NM_024119.2		79132	149408121	NM_024119.2	DHX58	NP_077024.2	ILMN_1678422	0003930681	S	2393	CTGGCTTAGGCTCCCGCAATGGGAAAACAACCGGAGGGCCAGAGCTTAGT	17	-	40253596-40253645	17q21.2b	Homo sapiens DEXH (Asp-Glu-X-His) box polypeptide 58 (DHX58), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	D11LGP2; LGP2; D11lgp2e	D11lgp2e
Homo sapiens	RefSeq	NM_152439.1	ILMN_7183	VMD2L3	NM_152439.1	NM_152439.1		144453	22748926	NM_152439.1	VMD2L3	NP_689652.1	ILMN_1790794	0002680687	S	2383	AAGGTGTCAACAAATCCAGCCTGATACCCTTCCAGTCTCACTTCCAGTGG	12	-	68334101-68334150	12q15c	Homo sapiens vitelliform macular dystrophy 2-like 3 (VMD2L3), mRNA.				MGC40411	MGC40411
Homo sapiens	RefSeq	NM_172071.1	ILMN_3717	RC3H1	NM_172071.1	NM_172071.1		149041	73695472	NM_172071.1	RC3H1	NP_742068.1	ILMN_1807147	0006940403	S	5004	TAAACAAATGGGTGGTGGGGGTGGGAAGGGTAATACAGTCCTGCCATTGC	1	-	172172917-172172966	1q25.1a	Homo sapiens ring finger and CCCH-type zinc finger domains 1 (RC3H1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP5-1198E17.5; KIAA2025; RNF198	RP5-1198E17.5; KIAA2025; RNF198
Homo sapiens	RefSeq	XM_938541.1	ILMN_36576	MGC15634	XM_938541.1	XM_938541.1		84841	88952855	XM_938541.1	MGC15634	XP_943634.1	ILMN_1661440	0007100343	A	694	ACTCGGGGGACAAGGAGGGAACTACAGTCAGTAACAGCAGCATGAGCCTC					PREDICTED: Homo sapiens hypothetical protein MGC15634 (MGC15634), mRNA.					
Homo sapiens	RefSeq	XR_042474.1	ILMN_347675	LOC100130827	XR_042474.1	XR_042474.1		100130827	169214107	XR_042474.1	LOC100130827		ILMN_3267631	0004730707	M	1337	GAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTG				19q13.42c	PREDICTED: Homo sapiens misc_RNA (LOC100130827), miscRNA.					
Homo sapiens	RefSeq	XR_042474.1	ILMN_347675	LOC100130827	XR_042474.1	XR_042474.1		100130827	169214107	XR_042474.1	LOC100130827		ILMN_3191166	0001030091	A	574	GAACTGCTGGTGAAGCGGGTGGTGGCCCAGTTGGCAGGAGCTCTGGACTT				19q13.42c	PREDICTED: Homo sapiens misc_RNA (LOC100130827), miscRNA.					
Homo sapiens	RefSeq	NM_012307.2	ILMN_14465	EPB41L3	NM_012307.2	NM_012307.2		23136	32490571	NM_012307.2	EPB41L3	NP_036439.2	ILMN_2109197	0001510538	S	3798	GCTGTCTAGGTCCGTCCGGTGTGTCAGATTTTCCTCAGATTAGATGTGCC	18	-	5406955-5406967:5407700-5407735:5409710-5409710	18p11.31c-p11.31b	Homo sapiens erythrocyte membrane protein band 4.1-like 3 (EPB41L3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9892180] [evidence NAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 12234973] [evidence IDA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DAL-1; KIAA0987; 4.1B; FLJ37633; DAL1	DAL-1; KIAA0987; 4.1B; FLJ37633; DAL1
Homo sapiens	RefSeq	NM_148959.2	ILMN_25777	HUS1B	NM_148959.3	NM_148959.3		135458	82659116	NM_148959.3	HUS1B	NP_683762.2	ILMN_1706410	0005900187	S	678	AACAGAGACCTGGAGAGCATGGTGCAAGTGCGGGTGGACAATCGGAAGCT	6	-	656237-656286	6p25.3b	Homo sapiens HUS1 checkpoint homolog b (S. pombe) (HUS1B), mRNA.				RP11-532F6.1; MGC126748; MGC126746	RP11-532F6.1; MGC126748; MGC126746
Homo sapiens	RefSeq	NM_030644.1	ILMN_182146	APOL3	NM_145641.1	NM_145641.1		80833	22035647	NM_145641.1	APOL3	NP_663616.1	ILMN_1756862	0001980750	A	3302	ATGATGGCGGTGGAGGTGGTGGTTGTAGTGTGATGGATCCCCTTTAGGTT	22	-	34866598-34866647	22q12.3d	Homo sapiens apolipoprotein L, 3 (APOL3), transcript variant beta/a, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10233894] [evidence TAS]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [pmid 10233894] [evidence TAS]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	CG12-1; APOLIII	CG12-1; APOLIII
Homo sapiens	RefSeq	NM_145641.1	ILMN_182146	APOL3	NM_145641.1	NM_145641.1		80833	22035647	NM_145641.1	APOL3	NP_663616.1	ILMN_2369144	0004900102	A	3023	AGACTAACGAATATATTGGGGGGAGGAATAGAGGGGAGGTGTGCAGGAAC	22	-	34866877-34866926	22q12.3d	Homo sapiens apolipoprotein L, 3 (APOL3), transcript variant beta/a, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10233894] [evidence TAS]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [pmid 10233894] [evidence TAS]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	CG12-1; APOLIII	CG12-1; APOLIII
Homo sapiens	Unigene	Hs.552871	ILMN_111145	HS.552871	Hs.552871		Hs.552871		7458406	AW665857			ILMN_1851906	0001690575	S	342	AACTCAGGTGTCTGGGGGCCTGGGCACAAGTCTGCAATGGTGAGTGCTGT	11	+	134447717-134447766		hi94g06.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2979994 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001800.3	ILMN_29667	CDKN2D	NM_079421.2	NM_079421.2		1032	39995073	NM_079421.2	CDKN2D	NP_524145.1	ILMN_1748883	0007050326	A	884	CTAGAAGCTGGTGGCCTTGGCCGGCTGTGCTCAGAGACCTGAAGTGTGCA	19	-	10677349-10677398	19p13.2b	Homo sapiens cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) (CDKN2D), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15750620] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8741839] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15750620] [evidence IDA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 8741839] [evidence IDA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 10208428] [evidence IDA]; Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 15750620] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 15750620] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10208428] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 15750620] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 10208428] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 16322758] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus [goid 33280] [pmid 16322758] [evidence IMP]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 15750620] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Destruction of a cell by its own lysosomal contents. This type of programmed cell death is seen when entire tissues, or parts thereof, are committed to destruction, and occurs by the formation of multiple acidic autophagic vacuoles within the doomed cells [goid 48102] [pmid 16322758] [evidence IMP]	Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 8741839] [evidence IDA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8741839] [evidence IPI]	p19-INK4D; INK4D; p19	p19-INK4D; INK4D; p19
Homo sapiens	RefSeq	XM_001717738.1	ILMN_333817	LOC100129531	XM_001717738.1	XM_001717738.1		100129531	169203405	XM_001717738.1	LOC100129531	XP_001717790.1	ILMN_3251820	0002850070	M	506	CCAGCCTTGGGGTGGAGTGGGTGTGGACAGTGAGCAGAAAAACAAGAAAC				11p13c	PREDICTED: Homo sapiens hypothetical LOC100129531 (LOC100129531), mRNA.					
Homo sapiens	RefSeq	XM_001725693.1	ILMN_345943	LOC100132499	XM_001725693.1	XM_001725693.1		100132499	169171098	XM_001725693.1	LOC100132499	XP_001725745.1	ILMN_3288268	0002750066	M	10	CTGAGACCAAGATGGGTCACCAGAAGCTATGCTGGAGCCACCCGCGAAAA	7	+	102776273-102776283:102776284-102776322	7q22.1g	PREDICTED: Homo sapiens similar to mCG7602 (LOC100132499), mRNA.					
Homo sapiens	Unigene	Hs.544828	ILMN_108164	HS.544828	Hs.544828		Hs.544828		307191	L19368			ILMN_1879800	0006250653	S	81	GGGGAGAGGGTGTCCAATGTTTTGTGAACAGCTCTTTGAGACAATGCTGC	7	-	142631318-142631367		Human (clone xip7) mRNA sequence					
Homo sapiens	RefSeq	NM_144981.1	ILMN_163644	LOC729101	XR_015731.1	XR_015731.1		729101	113422450	XR_015731.1	LOC729101		ILMN_1749612	0005340332	S	86	CGTTGGTGGTGTTGTCATGTGTTCTGGACCATCAATGGAGCCTACAATTC	11	+	63156355-63156404	11q13.1a	PREDICTED: Homo sapiens misc_RNA (LOC729101), miscRNA.					FLJ25059
Homo sapiens	RefSeq	NM_020749.3	ILMN_4658	MTUS1	NM_020749.3	NM_020749.3		57509	50348596	NM_020749.3	MTUS1	NP_065800.1	ILMN_1663648	0007320520	I	324	TACGACTGACGGCCAAAGGATTGCTTCGAAACCTTCGACTTCCTTCAGGG	8	-	17599076-17599125	8p22b	Homo sapiens mitochondrial tumor suppressor 1 (MTUS1), nuclear gene encoding mitochondrial protein, transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]		MTSG1; MP44; DKFZp586D1519; ATIP; FLJ14295; KIAA1288; DKFZp686F20243	MTSG1; MP44; DKFZp586D1519; ATIP; FLJ14295; KIAA1288; DKFZp686F20243
Homo sapiens	RefSeq	NM_001013630.1	ILMN_19498	AADACL4	NM_001013630.1	NM_001013630.1		343066	61966716	NM_001013630.1	AADACL4	NP_001013652.1	ILMN_1668851	0002600309	S	1239	CCCCGAGGAGGAAGGGGCAAGTATGGACTCTACCAGAAACCGGGTGCTTT	1	+	12649348-12649397	1p36.21d	Homo sapiens arylacetamide deacetylase-like 4 (AADACL4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_014011.4	ILMN_164963	SOCS5	NM_144949.2	NM_144949.2		9655	41349445	NM_144949.2	SOCS5	NP_659198.1	ILMN_1785286	0004880750	A	2672	GCCCAGGATGATTTTGTGAACCGTGAAGTACGTGAGACTAGAAGACGCCC	2	+	46841593-46841642	2p21a	Homo sapiens suppressor of cytokine signaling 5 (SOCS5), transcript variant 2, mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [pmid 10773671] [evidence NAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation [goid 45627] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence ISS]	Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	CIS6; SOCS-5; KIAA0671; CISH6; Cish5	CIS6; KIAA0671; CISH6; SOCS-5; Cish5
Homo sapiens	RefSeq	NM_144949.2	ILMN_164963	SOCS5	NM_144949.2	NM_144949.2		9655	41349445	NM_144949.2	SOCS5	NP_659198.1	ILMN_1715584	0004070280	I	168	TGACTGCGCCGTCCGGGCCCGTCCTGCCTGGCCGCAGGTGCCCTGGATGA	2	+	46780020-46780069	2p21a	Homo sapiens suppressor of cytokine signaling 5 (SOCS5), transcript variant 2, mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [pmid 10773671] [evidence NAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation [goid 45627] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence ISS]	Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	CIS6; SOCS-5; KIAA0671; CISH6; Cish5	CIS6; KIAA0671; CISH6; SOCS-5; Cish5
Homo sapiens	RefSeq	NM_007254.2	ILMN_24073	PNKP	NM_007254.2	NM_007254.2		11284	31543418	NM_007254.2	PNKP	NP_009185.2	ILMN_1694111	0007610184	S	1584	AAGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCG	19	-	55056355-55056404	19q13.33b	Homo sapiens polynucleotide kinase 3'-phosphatase (PNKP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10446193] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10446193] [evidence NAS]; The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 10446192] [evidence NAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 10446192] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 10446192] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [pmid 10446192] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [pmid 10446193] [evidence NAS]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [pmid 10446193] [evidence IDA]; The series of events required to receive a stimulus indicating DNA damage has occurred and convert it to a molecular signal [goid 42769] [pmid 10446192] [evidence IDA]; The series of events required to receive a stimulus indicating DNA damage has occurred and convert it to a molecular signal [goid 42769] [pmid 10446193] [evidence NAS]; The process of introducing one or more phosphate groups into a nucleotide to produce a phosphorylated nucleoside [goid 46939] [pmid 10446193] [evidence IDA]	Interacting selectively with damaged DNA [goid 3684] [pmid 10446193] [evidence NAS]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 10446193] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [pmid 10446192] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10446192] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [pmid 10446193] [evidence NAS]; Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate [goid 19201] [pmid 10446193] [evidence IDA]; Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate [goid 19201] [pmid 10446192] [evidence IDA]; Catalysis of the reaction: 3'-phosphopolynucleotide + H2O = a polynucleotide + phosphate. Hydrolyzes the free 3'-phosphate resulting from single strand breaks in DNA due to oxidative damage [goid 46403] [pmid 10446192] [evidence IDA]; Catalysis of the reaction: 3'-phosphopolynucleotide + H2O = a polynucleotide + phosphate. Hydrolyzes the free 3'-phosphate resulting from single strand breaks in DNA due to oxidative damage [goid 46403] [pmid 10446193] [evidence IDA]; Catalysis of the reaction: ATP + 5'-dephospho-DNA = ADP + 5'-phospho-DNA [goid 46404] [pmid 10446193] [evidence IDA]	PNK	PNK
Homo sapiens	RefSeq	XM_939506.1	ILMN_138994	GTF2I	XM_939506.1	XM_939506.1		2969	89026111	XM_939506.1	GTF2I	XP_944599.1	ILMN_1653189	0005560309	I	1448	AGCGAACGACGTGACCTTTTCCTTCATCTTCTGGATTCTCAGTGTGACTG				7q11.23c	PREDICTED: Homo sapiens general transcription factor II, i (GTF2I), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 9334314] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9012831] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9334314] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9012831] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 9334314] [evidence TAS]		
Homo sapiens	RefSeq	XM_934751.1	ILMN_30891	LOC440356	XM_934751.1	XM_934751.1		440356	89040148	XM_934751.1	LOC440356	XP_939844.1	ILMN_1717129	0002360364	A	597	TGGATTCATCACAGGACCCTCCAGCCTCAGCCAGCAAGGATACCACCAGG	16	+	29786786-29786835	16p11.2d	PREDICTED: Homo sapiens hypothetical gene supported by AK131031; BC070380, transcript variant 2 (LOC440356), mRNA.					
Homo sapiens	RefSeq	NM_001007088.1	ILMN_19238	ZNF182	NM_001007088.1	NM_001007088.1		7569	55769560	NM_001007088.1	ZNF182	NP_001007089.1	ILMN_2337835	0000240484	A	2842	GGCCCTGGTTTCTTTTCCCACATGAACCTCCAGCAAATAGCAAGTCCAGG	X	-	47834846-47834895	Xp11.23e	Homo sapiens zinc finger protein 182 (ZNF182), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF21; KOX14; HHZ150; Zfp182; MGC131713; MGC125383	ZNF21; KOX14; HHZ150; Zfp182; MGC131713; MGC125383
Homo sapiens	RefSeq	NM_032492.3	ILMN_364287	JAGN1	NM_032492.3	NM_032492.3		84522	190014600	NM_032492.3	JAGN1	NP_115881.3	ILMN_3238036	0002100441	S	1252	CTCCTTGAGAAACCTAGCAGTGGCCATAGAGAAGTAGACTGGGTATGGGG	3	+	9935625-9935674	3p25.3c	Homo sapiens jagunal homolog 1 (Drosophila) (JAGN1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_203413.1	ILMN_165507	C17ORF81	NM_203413.1	NM_203413.1		23587	44662831	NM_203413.1	C17orf81	NP_981958.1	ILMN_1672554	0004180491	A	1997	GTGTTAGCCTTACCCTGTCCCTGCCCCACCTTGGTTCCCCTTGTCTATGG	17	+	7103805-7103854	17p13.1d	Homo sapiens chromosome 17 open reading frame 81 (C17orf81), transcript variant 2, mRNA.				HSPC002; MSTP071; MST071; DERP6	HSPC002; MSTP071; MST071; DERP6
Homo sapiens	RefSeq	NM_203413.1	ILMN_165507	C17ORF81	NM_203413.1	NM_203413.1		23587	44662831	NM_203413.1	C17orf81	NP_981958.1	ILMN_1705414	0001170022	I	1754	CCAGACCCAACCTGTTAGCTACCCTCACCAGCACCAAATCTTCCCTTCTC	17	+	7103562-7103611	17p13.1d	Homo sapiens chromosome 17 open reading frame 81 (C17orf81), transcript variant 2, mRNA.				HSPC002; MSTP071; MST071; DERP6	HSPC002; MSTP071; MST071; DERP6
Homo sapiens	RefSeq	XR_016233.2	ILMN_168243	LOC653174	XR_016233.2	XR_016233.2		653174	169217427	XR_016233.2	LOC653174		ILMN_3245539	0006770706	S	462	GAAAAGATGGAGCGGAGGCGCAAGCCCCAGCTAGACCGCAGAGGCGCCGT	Y	+	9955624-9955673	Yp11.2c	PREDICTED: Homo sapiens misc_RNA (LOC653174), miscRNA.					
Homo sapiens	RefSeq	NM_080759.3	ILMN_19600	DACH1	NM_080759.3	NM_080759.3		1602	55749843	NM_080759.3	DACH1	NP_542937.1	ILMN_1666882	0002230184	I	1712	CAGTTATTAAGGAGCGTGTTCCTGATAGCCCCTCACCTGCCCCCTCTCTG	13	-	71032055-71032088:71044973-71044988	13q21.33d	Homo sapiens dachshund homolog 1 (Drosophila) (DACH1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14525983] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	DACH; FLJ10138	DACH; FLJ10138
Homo sapiens	RefSeq	NM_001012960.1	ILMN_10202	C1ORF84	NM_001012960.1	NM_001012960.1		149469	61676210	NM_001012960.1	C1orf84	NP_001012978.1	ILMN_1657913	0001440681	I	4704	CCCCTGGTGCTAACCGTGAACGTAGAGACTTGTTCTGAGGACATCCACAC	1	+	43667000-43667049	1p34.2a	Homo sapiens chromosome 1 open reading frame 84 (C1orf84), transcript variant 1, mRNA.				FLJ34502; RP11-506B15.1	FLJ34502; RP11-506B15.1
Homo sapiens	RefSeq	NM_001077511.1	ILMN_176647	TCF19	NM_001077511.1	NM_001077511.1		6941	117414151	NM_001077511.1	TCF19	NP_001070979.1	ILMN_2317618	0003890097	A	2686	GAAATGACTCTGGGGCAAAGACCCCTAATGAACTAGTGGCAGAGCCAGGA	6	+	31131618-31131667	6p21.33a	Homo sapiens transcription factor 19 (TCF19), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1868030] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 1868030] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1868030] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SC1; SC1-1	SC1; SC1-1
Homo sapiens	RefSeq	XM_938837.1	ILMN_181749	LOC649768	XM_001129427.1	XM_001129427.1		649768	113422726	XM_001129427.1	LOC649768	XP_001129427.1	ILMN_1786343	0007210431	S	6041	CAGAGACTGCCCACACCTCCACAGTGCTTACCACCACGGCCACCACAACT					PREDICTED: Homo sapiens mucin MUC5B (LOC649768), mRNA.					
Homo sapiens	RefSeq	NM_020451.2	ILMN_179740	SEPN1	NM_020451.2	NM_020451.2		57190	47578098	NM_020451.2	SEPN1	NP_065184.2	ILMN_2289887	0004290722	I	388	GTGGTGCAGTCACAGCTCACTGCAGCCTCAACTTCCCTGGCTCAATTGAT	1	+	26001125-26001174	1p36.11b	Homo sapiens selenoprotein N, 1 (SEPN1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	RSS; MDRS1; FLJ24021; RSMD1; SELN	RSS; MDRS1; FLJ24021; RSMD1; SELN
Homo sapiens	RefSeq	NM_020451.2	ILMN_179740	SEPN1	NM_020451.2	NM_020451.2		57190	47578098	NM_020451.2	SEPN1	NP_065184.2	ILMN_2399036	0000780162	A	4234	GCTCAGGGTGGGAGAGGGCCCCGGGCTGCCCTGTCACTCCTCTAACACTT	1	+	26017202-26017251	1p36.11b	Homo sapiens selenoprotein N, 1 (SEPN1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	RSS; MDRS1; FLJ24021; RSMD1; SELN	RSS; MDRS1; FLJ24021; RSMD1; SELN
Homo sapiens	RefSeq	NM_007278.1	ILMN_19419	GABARAP	NM_007278.1	NM_007278.1		11337	6005763	NM_007278.1	GABARAP	NP_009209.1	ILMN_2050109	0003840332	S	816	TGGGGGTAGTTGGAAGGGACTGAAATTGTGGGGGGAAGGTAGGAGGCACA	17	-	7143765-7143814	17p13.1d	Homo sapiens GABA(A) receptor-associated protein (GABARAP), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding an autophagic vacuole, a double-membrane-bounded vesicle in which endogenous cellular material is sequestered [goid 421] [pmid 15169837] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; The smooth endoplasmic reticulum (ER) has with no ribosomes attached to it. The smooth is the recipient of the proteins synthesized in the rough ER. Those proteins to be exported are passed to the Golgi complex, the resident proteins are returned to the rough ER and the lysosomal proteins after phosphorylation of their mannose residues are passed to the lysosomes. Glycosylation of the glycoproteins also continues. The smooth ER is the site of synthesis of lipids, including the phospholipids. The membranes of the smooth ER also contain enzymes that catalyze a series of reactions to detoxify both lipid-soluble drugs and harmful products of metabolism. Large quantities of certain compounds such as phenobarbital cause an increase in the amount of the smooth ER [goid 5790] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9892355] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 9892355] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9892355] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11146101] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [pmid 9892355] [evidence IDA]; Interacting selectively with the gamma-aminobutyric acid (GABA, 4-aminobutyrate) receptor [goid 50811] [pmid 9892355] [evidence IPI]	MM46; MGC120155; FLJ25768; MGC120154	MM46; MGC120155; FLJ25768; MGC120154
Homo sapiens	RefSeq	NM_153437.1	ILMN_23115	ODF2	NM_153437.1	NM_153437.1		4957	24430182	NM_153437.1	ODF2	NP_702915.1	ILMN_1698653	0001190066	I	2132	AGAAAGGGTCCCACGAACTGACCCGAGCAGGGGCCCGCATACCAAGATGA	9	+	130296782-130296831	9q34.11b	Homo sapiens outer dense fiber of sperm tails 2 (ODF2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 10072582] [evidence TAS]	ODF84; MGC9034; ODF2/1; MGC111096; ODF2/2; FLJ44866	ODF84; MGC9034; ODF2/1; MGC111096; ODF2/2; FLJ44866
Homo sapiens	RefSeq	XM_926800.1	ILMN_43245	LOC642769	XM_926800.1	XM_926800.1		642769	89059041	XM_926800.1	LOC642769	XP_931893.1	ILMN_1709768	0006130673	S	1201	CTGAGAGGTTTAGACTTGGGGGGTAAAATGGATAAATGAAGATGTTCCGG	22	-	45890521-45890570		PREDICTED: Homo sapiens hypothetical protein LOC642769 (LOC642769), mRNA.					
Homo sapiens	RefSeq	XM_940165.1	ILMN_42821	C9ORF122	XM_379636.4	XM_379636.4		158228	113420606	XM_379636.4	C9orf122	XP_379636.3	ILMN_1744581	0005490286	A	3052	CTGAGGGATTGCCTTAACTATTTTGTGTTAAGCCAGGCTTGCATACCTGG	9	+	38614602-38614651	9p13.1b	PREDICTED: Homo sapiens chromosome 9 open reading frame 122 (C9orf122), mRNA.					
Homo sapiens	RefSeq	NM_178865.3	ILMN_3596	SERINC2	NM_178865.3	NM_178865.3		347735	71834871	NM_178865.3	SERINC2	NP_849196.2	ILMN_2111932	0003390484	S	1655	TGAGCCGGGCCTTCTAGTCGTAGTGCCTTCAGGGTCCGAGGAGCATCAGG	1	+	31679770-31679819	1p35.2a	Homo sapiens serine incorporator 2 (SERINC2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. They are important constituents of cell membranes [goid 6658] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51347] [evidence ISS]		TDE2; PRO0899; MGC90340; FKSG84; TDE2L	TDE2; PRO0899; MGC90340; FKSG84; TDE2L
Homo sapiens	RefSeq	NM_203440.2	ILMN_28277	C10ORF4	NM_203440.2	NM_203440.2		118924	50408561	NM_203440.2	C10orf4	NP_982264.2	ILMN_1742604	0006100458	I	1034	TGGAGGAACTGCAGATGTTTACCTGGGAGAAGAGTGAAAGGATGGGAGGG	10	-	95423064-95423113	10q23.33b	Homo sapiens chromosome 10 open reading frame 4 (C10orf4), transcript variant FRA10AC1-3.1, mRNA.				FRA10AC1; F26C11.1-like	FRA10AC1; F26C11.1-like
Homo sapiens	RefSeq	XM_001715060.1	ILMN_337230	LOC100129303	XM_001715060.1	XM_001715060.1		100129303	169206176	XM_001715060.1	LOC100129303	XP_001715112.1	ILMN_3255569	0000630414	M	984	GCCTCTTCAACGGAAAGCTCACCTGGGGGCACGCAAAAAACGAATGGATG				13q14.3c	PREDICTED: Homo sapiens hypothetical protein LOC100129303 (LOC100129303), mRNA.					
Homo sapiens	RefSeq	XM_495907.2	ILMN_35220	LOC440080	XM_495907.2	XM_495907.2		440080	89035286	XM_495907.2	LOC440080	XP_495907.2	ILMN_1661055	0001430747	I	820	CCCTGGAAGGTTGGTACTATTTATTTCTTGTTGAATGCTGTGTGAAGTTT	12	-	9441748-9441797		PREDICTED: Homo sapiens similar to cDNA sequence BC048546, transcript variant 1 (LOC440080), mRNA.					
Homo sapiens	RefSeq	XM_942501.1	ILMN_137685	CSF2RA	XM_942501.1	XM_942501.1		1438	89060605	XM_942501.1	CSF2RA	XP_947594.1	ILMN_1721204	0000130674	I	1791	CCGTTGCACTCCAGCCTGGGTAACAAACTAAGACCCCATCTCTCTGTCTC				Xp22.33e,Yp11.32a	PREDICTED: Homo sapiens colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) (CSF2RA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2555171] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1358805] [evidence TAS];  [goid 4896] [evidence IEA]		
Homo sapiens	RefSeq	NM_031474.1	ILMN_7671	NRIP2	NM_031474.1	NM_031474.1		83714	13899326	NM_031474.1	NRIP2	NP_113662.1	ILMN_1664607	0003420255	S	2398	TGAGCCTGGGGTTGACTGGGTTAGAGAAGAACCGGGATGCAAGGAGCTGC	12	-	2805072-2805121	12p13.33a	Homo sapiens nuclear receptor interacting protein 2 (NRIP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	DKFZP761G1913	DKFZP761G1913
Homo sapiens	RefSeq	XR_041273.1	ILMN_336824	LOC730100	XR_041273.1	XR_041273.1		730100	169163244	XR_041273.1	LOC730100		ILMN_3298554	0002760482	M	75	AGAGGGTGCCAGGAAAGGGTCCAGCAGTCAAAGAGAAGGGGCCAAGGAGT	2	+	51113323-51113372	2p16.3b	PREDICTED: Homo sapiens hypothetical protein LOC730100 (LOC730100), miscRNA.					
Homo sapiens	RefSeq	XM_936627.1	ILMN_166390	LOC645683	XR_018261.1	XR_018261.1		645683	113424884	XR_018261.1	LOC645683		ILMN_1659771	0004230370	S	434	GAGGTTAGGTGGAAGTACCAGGCAGTGACAGCCACCCTGGAGGAGAAGAG				14q22.3b	PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC645683), mRNA.					
Homo sapiens	RefSeq	NM_001037278.1	ILMN_4963	GGPS1	NM_001037278.1	NM_001037278.1		9453	83700222	NM_001037278.1	GGPS1	NP_001032355.1	ILMN_2346856	0001030360	A	2196	CCCGCCCACATCACCACCCCGACTTGAAGACAGTAGGTGCTTGAATGGAA	1	+	233573848-233573897	1q42.3b	Homo sapiens geranylgeranyl diphosphate synthase 1 (GGPS1), transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9741684] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate [goid 4337] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate [goid 4161] [evidence IEA]; Catalysis of the reaction: trans,trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate [goid 4311] [pmid 9741684] [evidence IDA]; Catalysis of the reaction: trans,trans-farnesyl diphosphate + isopentenyl diphosphate = diphosphate + geranylgeranyl diphosphate [goid 4311] [pmid 10026212] [evidence IDA]; Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate [goid 4337] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GGPPS1; GGPPS	GGPPS1; GGPPS
Homo sapiens	RefSeq	XM_926178.1	ILMN_33328	LOC642743	XM_926178.1	XM_926178.1		642743	89031529	XM_926178.1	LOC642743	XP_931271.1	ILMN_1718240	0004120592	S	9	CTTTGAGAGGTTCAAGGCTTCAATGGAGAAAGTAACTGCAGATGTGGTGG	10	+	83238839-83238888		PREDICTED: Homo sapiens hypothetical protein LOC642743 (LOC642743), mRNA.					
Homo sapiens	Unigene	Hs.575608	ILMN_127789	HS.575608	Hs.575608		Hs.575608		22356072	BQ940594			ILMN_1911806	0003710326	S	661	TTCAGAAGAACAGCATCCACTGGGGGGCTCTGTGGGCCTCGACCTCATCA	8	+	49457342-49457391		AGENCOURT_8806885 NIH_MGC_47 Homo sapiens cDNA clone IMAGE:6338475 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001724421.1	ILMN_348556	LOC100129674	XM_001724421.1	XM_001724421.1		100129674	169211444	XM_001724421.1	LOC100129674	XP_001724473.1	ILMN_3268717	0006020709	M	1164	ACTCAGCACTCAGCTGCATGCGGGACAGGAAGAGGAAGATCAAAACGTTG				17q24.1a	PREDICTED: Homo sapiens similar to hCG2002091 (LOC100129674), mRNA.					
Homo sapiens	RefSeq	XM_375928.3	ILMN_183448	LOC728056	XM_001128301.1	XM_001128301.1		728056	113428914	XM_001128301.1	LOC728056	XP_001128301.1	ILMN_1668053	0003140414	S	2428	CTCCCACTGCAACTCCACTTTCTTTGCATCTCTTCAGGGCACTGTGTGGC	20	-	62427410-62427459	20q13.33e	PREDICTED: Homo sapiens similar to IQ motif and Sec7 domain 3 (LOC728056), mRNA.					
Homo sapiens	Unigene	Hs.443490	ILMN_92552	HS.443490	Hs.443490		Hs.443490		16552223	AK056736			ILMN_1860288	0004220059	S	2012	GGGTCTTTGTGTCCCTGGCATATTATCATCTTCATGGAAAGAATCCACTG	X	+	21812927-21812976		Homo sapiens cDNA FLJ32174 fis, clone PLACE6001064					
Homo sapiens	RefSeq	NM_014278.2	ILMN_22150	HSPA4L	NM_014278.2	NM_014278.2		22824	31541940	NM_014278.2	HSPA4L	NP_055093.2	ILMN_1732468	0000610408	S	2812	GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAG	4	+	128754068-128754117	4q28.1e	Homo sapiens heat shock 70kDa protein 4-like (HSPA4L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]	Osp94; APG-1	Osp94; APG-1
Homo sapiens	RefSeq	XM_931864.1	ILMN_308444	PLEKHA2	NM_021623.1	NM_021623.1		59339	154146215	NM_021623.1	PLEKHA2	NP_067636.1	ILMN_1796339	0002970437	I	5419	CTGTTTGACCTCCTCCCCCTCTGCTTATGAAGGGGTAGCATGATTCTGTG	8	+	38831208-38831257	8p11.23b	Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 (PLEKHA2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 11001876] [evidence IDA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]	TAPP2; FLJ25921	
Homo sapiens	RefSeq	XM_496973.2	ILMN_308444	PLEKHA2	NM_021623.1	NM_021623.1		59339	154146215	NM_021623.1	PLEKHA2	NP_067636.1	ILMN_1789138	0001430156	A	383	CAATGGGGGCAGGAGCTGTTGGAGCTTTGCAGCTGACCTACATCTCGAAG	8	+	38793519-38793568	8p11.23b	Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 (PLEKHA2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 11001876] [evidence IDA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]	TAPP2; FLJ25921	
Homo sapiens	RefSeq	XM_496973.2	ILMN_308444	PLEKHA2	NM_021623.1	NM_021623.1		59339	154146215	NM_021623.1	PLEKHA2	NP_067636.1	ILMN_1715589	0002650669	I	999	CAAGTCTGGTGATCTCTTAATGAGGGACAACCTGTTTGAAATAATAACAA	8	+	38810877-38810885:38814841-38814881	8p11.23b	Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 (PLEKHA2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 11001876] [evidence IDA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]	TAPP2; FLJ25921	
Homo sapiens	RefSeq	XR_037692.1	ILMN_352008	LOC402116	XR_037692.1	XR_037692.1		402116	169164487	XR_037692.1	LOC402116		ILMN_3218851	0000070131	A	1448	TCACCAGCAAAAACATGGAGAAAGCCAAAGCCCTGGCCAACTCGGGAGGC				2q34a	PREDICTED: Homo sapiens misc_RNA (LOC402116), miscRNA.					
Homo sapiens	RefSeq	XR_037692.1	ILMN_352008	LOC402116	XR_037692.1	XR_037692.1		402116	169164487	XR_037692.1	LOC402116		ILMN_3234371	0006330041	I	2013	CTTCTTATAGAGCAGAACAGTACCCAGGATCCCCAGACTCATGGCTGCAG				2q34a	PREDICTED: Homo sapiens misc_RNA (LOC402116), miscRNA.					
Homo sapiens	RefSeq	XM_928410.1	ILMN_45629	LOC651849	XM_941106.1	XM_941106.1		651849	88999484	XM_941106.1	LOC651849	XP_946199.1	ILMN_1668080	0006400682	S	2	TGGAGGAAGAACAGGAGTGGGGGAAGATCAATGCCTGCAGCGACAAGGGC					PREDICTED: Homo sapiens similar to MARCKS-related protein (MARCKS-like protein 1) (Macrophage myristoylated alanine-rich C kinase substrate) (Mac-MARCKS) (MacMARCKS) (LOC651849), mRNA.					
Homo sapiens	RefSeq	XM_930159.2	ILMN_34671	LOC647138	XM_930159.2	XM_930159.2		647138	113425965	XM_930159.2	LOC647138	XP_935252.1	ILMN_3294085	0000840181	M	98	TGGTCCAGCTCTCCTGGCTCAGGGATTCCTTGCCTAGGCGCCGGCGCCCC	16	+	32035445-32035494	16p11.2b	PREDICTED: Homo sapiens similar to kinase suppressor of ras 1 (LOC647138), mRNA.					
Homo sapiens	RefSeq	NM_022725.2	ILMN_176272	FANCF	NM_022725.2	NM_022725.2		2188	42716285	NM_022725.2	FANCF	NP_073562.1	ILMN_1682724	0005050451	S	3161	CCAGAAGCCTAGCACAGTGTCCAGCATATGGTAGATACTTGTAGTGTTTG	11	-	22600753-22600802	11p14.3d	Homo sapiens Fanconi anemia, complementation group F (FANCF), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11063725] [evidence IPI]	MGC126856; FAF	FAF
Homo sapiens	Unigene	Hs.36808	ILMN_72457	HS.36808	Hs.36808		Hs.36808		993874	H53727			ILMN_1891878	0004480196	S	286	TCTCACGTCCCAACAGACCTTTAAGACAGGACCGCTTGTTGTGTTTGGGG	21	+	46295790-46295839		yu38g09.r1 Soares ovary tumor NbHOT Homo sapiens cDNA clone IMAGE:236128 5, mRNA sequence					
Homo sapiens	RefSeq	NM_017898.3	ILMN_6911	MOSC2	NM_017898.3	NM_017898.3		54996	31542712	NM_017898.3	MOSC2	NP_060368.2	ILMN_1665775	0002140167	S	1218	GGATCCACTAGGGTGATATGGCTTCAGCAACCAGGAGGGATTGACTGAGA	1	+	219021878-219021897:219023884-219023913	1q41d	Homo sapiens MOCO sulphurase C-terminal domain containing 2 (MOSC2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with molybdenum (Mo) ions [goid 30151] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	FLJ20605; RP11-270A6.1	FLJ20605; RP11-270A6.1
Homo sapiens	RefSeq	NM_152833.2	ILMN_308670	C9ORF69	NM_152833.2	NM_152833.2		90120	153792574	NM_152833.2	C9orf69	NP_690046.2	ILMN_3244065	0007380367	S	2523	GCAGGTAGGCGGGAGCTTCCCTGCGTGGGCCTCATTTCTTGCTGCAGAGA	9	-	139006699-139006748	9q34.3c	Homo sapiens chromosome 9 open reading frame 69 (C9orf69), mRNA.				bA83N9.1	bA83N9.1
Homo sapiens	RefSeq	NM_031410.1	ILMN_15553	PCDHA1	NM_031410.1	NM_031410.1		56147	14165399	NM_031410.1	PCDHA1	NP_113598.1	ILMN_1716109	0006330433	I	2426	TATTTTTCATATTTAACTTGTCTAATCATCTTTTCAAATATCACTTTAAA	5	+	140148485-140148534	5q31.3b	Homo sapiens protocadherin alpha 1 (PCDHA1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-ALPHA1	PCDH-ALPHA1
Homo sapiens	RefSeq	NM_080704.2	ILMN_17589	TRPV1	NM_080704.3	NM_080704.3		7442	117306161	NM_080704.3	TRPV1	NP_542435.2	ILMN_1671022	0002570731	I	84	TCTCTCAGTATCCATGACAGTGTGATGGAGAGTCTCTGCCGTGCCATCTG	17	-	3511829-3511859:3512603-3512621	17p13.3a	Homo sapiens transient receptor potential cation channel, subfamily V, member 1 (TRPV1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9349813] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9349813] [evidence TAS]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [pmid 9349813] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [pmid 9349813] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	VR1; DKFZp434K0220	VR1; DKFZp434K0220
Homo sapiens	Unigene	Hs.120193	ILMN_75616	HS.120193	Hs.120193		Hs.120193		27882719	BX119001			ILMN_1851063	0005720037	S	515	TGTGCAGGTGGCCTGTAGTGGTGTAAGCATGGACATTTAAGCATGACACC	3	-	198817542-198817591		BX119001 Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone IMAGp998A12892, mRNA sequence					
Homo sapiens	RefSeq	NM_000774.3	ILMN_165501	CYP2F1	NM_000774.3	NM_000774.3		1572	19743564	NM_000774.3	CYP2F1	NP_000765.2	ILMN_2149815	0002000747	S	1696	GCCCCGTCTGCAGGGCAGAGGCAGATGTGGCATGTCTTTTTGTACCCACA	19	+	41634151-41634200	19q13.2b	Homo sapiens cytochrome P450, family 2, subfamily F, polypeptide 1 (CYP2F1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 1974816] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	C2F1; MGC126121; CYP2F	C2F1; MGC126121; CYP2F
Homo sapiens	RefSeq	NM_000774.3	ILMN_165501	CYP2F1	NM_000774.3	NM_000774.3		1572	19743564	NM_000774.3	CYP2F1	NP_000765.2	ILMN_1761669	0001410767	S	958	AGACGGTGAGCACCACGCTGCACCACGCCTTCCTGGCACTCATGAAGTAC	19	+	41628806-41628855	19q13.2b	Homo sapiens cytochrome P450, family 2, subfamily F, polypeptide 1 (CYP2F1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 1974816] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	C2F1; MGC126121; CYP2F	C2F1; MGC126121; CYP2F
Homo sapiens	RefSeq	XM_001720464.1	ILMN_345566	LOC100128239	XM_001720464.1	XM_001720464.1		100128239	169203232	XM_001720464.1	LOC100128239	XP_001720516.1	ILMN_3188655	0003830377	A	189	AGCTGAGCCAGGCAGCCGGTGGAGCAGGCAGATGGAACAACAGAGACAAA				11q25d	PREDICTED: Homo sapiens hypothetical protein LOC100128239 (LOC100128239), mRNA.					
Homo sapiens	RefSeq	XM_945557.1	ILMN_138324	ANKRD13D	XM_945557.1	XM_945557.1		338692	89034912	XM_945557.1	ANKRD13D	XP_950650.1	ILMN_1790351	0003520692	I	288	TACCCCAACGGGAGGAAGAGGGAGCCTGCACAGCTTTCTGGTCACCAAGC				11q13.1f	PREDICTED: Homo sapiens ankyrin repeat domain 13 family, member D, transcript variant 3 (ANKRD13D), mRNA.					
Homo sapiens	RefSeq	NM_139162.2	ILMN_2932	SMCR7	NM_139162.2	NM_139162.2		125170	22538487	NM_139162.2	SMCR7	NP_631901.2	ILMN_1808295	0005670767	A	2202	TGAGTGTTTTCTTCAGGCAGCTGAGGGTCCTGGGGGAGCTGAGGCTCTGT	17	+	18109450-18109499	17p11.2f	Homo sapiens Smith-Magenis syndrome chromosome region, candidate 7 (SMCR7), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC23130	MGC23130
Homo sapiens	RefSeq	NM_139162.2	ILMN_2932	SMCR7	NM_139162.2	NM_139162.2		125170	22538487	NM_139162.2	SMCR7	NP_631901.2	ILMN_1815923	0003400661	I	13	TCCGATTGGAGTTAGGGCCTGCTTGTCTGCGTGCTGCGAAGTCCGCGGCT	17	+	18104606-18104655	17p11.2f	Homo sapiens Smith-Magenis syndrome chromosome region, candidate 7 (SMCR7), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC23130	MGC23130
Homo sapiens	RefSeq	XM_928299.1	ILMN_171584	LOC728499	XM_001127568.1	XM_001127568.1		728499	113416621	XM_001127568.1	LOC728499	XP_001127568.1	ILMN_1718934	0007160008	A	2474	TGTGGTGGTTTCCTTTTGTCTCCTTTATTACATGGGACTCTGACATGTGC	5	+	68986941-68986990	5q13.2a	PREDICTED: Homo sapiens similar to Nuclear envelope pore membrane protein POM 121 (Pore membrane protein of 121 kDa) (P145) (LOC728499), mRNA.					
Homo sapiens	RefSeq	NM_138716.2	ILMN_18744	MSR1	NM_138716.2	NM_138716.2		4481	109148506	NM_138716.2	MSR1	NP_619730.1	ILMN_2373285	0002570520	A	1093	ATAGGTCCTCCGGGTCTTAAAGGTGATCGGGGAGCAATTGGCTTTCCTGG	8	-	16052145-16052191:16056944-16056946	8p22c	Homo sapiens macrophage scavenger receptor 1 (MSR1), transcript variant SR-AIII, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8093617] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 2251254] [evidence TAS]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [pmid 2251254] [evidence TAS]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	SR-A; SCARA1; phSR2; phSR1; CD204	SR-A; SCARA1; phSR2; phSR1; CD204
Homo sapiens	RefSeq	XM_001131798.2	ILMN_173705	LOC729506	XM_001131798.2	XM_001131798.2		729506	169168500	XM_001131798.2	LOC729506	XP_001131798.1	ILMN_3301300	0000650270	M	4081	GCTGCGCTACCCGGTCTTGGGTTTTTCATCGGGGAGTGGGAGTGGACTGA				5p15.2d	PREDICTED: Homo sapiens hypothetical LOC729506 (LOC729506), mRNA.					
Homo sapiens	RefSeq	XM_001131798.2	ILMN_173705	LOC729506	XM_001131798.2	XM_001131798.2		729506	169168500	XM_001131798.2	LOC729506	XP_001131798.1	ILMN_3224722	0002140170	A	3430	TCATCCCCGCGACAGAGCCACAATCCAGCACCACCTTCCCAGGACTCTCA				5p15.2d	PREDICTED: Homo sapiens hypothetical LOC729506 (LOC729506), mRNA.					
Homo sapiens	RefSeq	NM_002945.2	ILMN_26088	RPA1	NM_002945.2	NM_002945.2		6117	20070171	NM_002945.2	RPA1	NP_002936.1	ILMN_1795719	0003120671	S	2122	GCTAGCGCAAGACCAGTCACTCCCTCTGCCTTCAGGCTTCTGTCAATTTC	17	+	1747447-1747496	17p13.3d	Homo sapiens replication protein A1, 70kDa (RPA1), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9826763] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11080452] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [pmid 16135809] [evidence IPI]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 16135809] [evidence IDA]	The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 8756712] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8756712] [evidence TAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 8756712] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 8756712] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1311258] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10825162] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1311258] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15897895] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RPA70; REPA1; RF-A; HSSB; RP-A	RPA70; REPA1; RF-A; HSSB; RP-A
Homo sapiens	RefSeq	NM_004512.3	ILMN_3536	IL11RA	NM_004512.3	NM_004512.3		3590	22212920	NM_004512.3	IL11RA	NP_004503.1	ILMN_1664912	0002760148	I	1617	TGCATGTATGTAGGTGCCTGGGGAGTGTGTGTGGGTCCTTGGCTCTTGGC	9	+	34651778-34651827	9p13.3c	Homo sapiens interleukin 11 receptor, alpha (IL11RA), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7670098] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		 [goid 4896] [evidence IEA]	MGC2146	MGC2146
Homo sapiens	RefSeq	NM_147162.1	ILMN_3536	IL11RA	NM_004512.3	NM_004512.3		3590	22212920	NM_004512.3	IL11RA	NP_004503.1	ILMN_1720024	0002570646	A	1164	GCTGTGCTGGCGTCTTTGGGAATCCTTTCTTTCCTGGGACTGGTGGCTGG	9	+	34650527-34650576	9p13.3c	Homo sapiens interleukin 11 receptor, alpha (IL11RA), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7670098] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		 [goid 4896] [evidence IEA]	MGC2146	MGC2146
Homo sapiens	RefSeq	XM_932941.1	ILMN_42483	LOC643275	XM_932941.2	XM_932941.2		643275	113423336	XM_932941.2	LOC643275	XP_938034.1	ILMN_1653092	0006200605	I	1098	TAAGAAGATTCCCAAATGACTGTAAAATTAAATACAAGCATGTTGAAAGT	12	-	49007401-49007432:49007433-49007450	12q13.13a	PREDICTED: Homo sapiens hypothetical LOC643275, transcript variant 2 (LOC643275), mRNA.					
Homo sapiens	RefSeq	XM_932941.1	ILMN_42483	LOC643275	XM_932941.2	XM_932941.2		643275	113423336	XM_932941.2	LOC643275	XP_938034.1	ILMN_1707659	0005290167	A	518	ACTTATTCCGCAAGTACATTGCCTATAGGCTGATCCAGCATGCCAGGAAC	12	-	49014149-49014153:49030379-49030423	12q13.13a	PREDICTED: Homo sapiens hypothetical LOC643275, transcript variant 2 (LOC643275), mRNA.					
Homo sapiens	Unigene	Hs.567461	ILMN_119642	HS.567461	Hs.567461		Hs.567461		15947341	BI835791			ILMN_1858367	0007510056	S	338	GTACTTTTGTGCTCTTGGGGAATTTACGTTTCCAACAACACGGTGGGATC	14	+	21634714-21634733:21988929-21988958		603087341F1 NIH_MGC_120 Homo sapiens cDNA clone IMAGE:5226155 5, mRNA sequence					
Homo sapiens	RefSeq	NM_000169.1	ILMN_165737	GLA	NM_000169.2	NM_000169.2		2717	125661058	NM_000169.2	GLA	NP_000160.1	ILMN_1766637	0000060630	S	1207	CCATCGCAGTTGCTTCCCTGGGTAAAGGAGTGGCCTGTAATCCTGCCTGC	X	-	100652940-100652989	Xq22.1c	Homo sapiens galactosidase, alpha (GLA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1332979] [evidence IMP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3029062] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1332979] [evidence IMP]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 1332979] [evidence IMP]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 3029062] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 1332979] [evidence IMP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [pmid 39940] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45019] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of glycosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of a monosaccharide (or derivative) by a ceramide group [goid 46477] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 46479] [pmid 2160973] [evidence TAS]; Any process that stops or reduces the activity of the enzyme nitric-oxide synthase [goid 51001] [evidence ISS]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactohydrolase [goid 4557] [pmid 16372133] [evidence IMP]; Catalysis of the hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactohydrolase [goid 4557] [pmid 39940] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 1332979] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 6256390] [evidence IDA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GALA	GALA
Homo sapiens	RefSeq	XM_373106.3	ILMN_34713	LOC391859	XM_373106.3	XM_373106.3		391859	88986502	XM_373106.3	LOC391859	XP_373106.3	ILMN_1792651	0000460242	S	416	CAGAGGACTCAGAGGACATTGGGGCAGAGAGCACGCAGGACGTCAGGGCA	5	+	178734306-178734355	5q35.3d	PREDICTED: Homo sapiens similar to Probable Coiled-coil domain-containing protein 8 (LOC391859), mRNA.					
Homo sapiens	RefSeq	NM_133379.1	ILMN_11052	TTN	NM_133379.2	NM_133379.2		7273	110349720	NM_133379.2	TTN	NP_596870.2	ILMN_1652056	0001820674	A	9901	GGAGTTCTGTCACTCTCTATGTCAATGCTCCTGAACCGCCCCAAGTTCTG	2	-	179629515-179629538:179631108-179631133	2q31.2b	Homo sapiens titin (TTN), transcript variant novex-3, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 10481174] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [pmid 7569978] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 9501083] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 8937992] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 97092327] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [pmid 7569978] [evidence TAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 10481174] [evidence TAS]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [pmid 9804419] [evidence IMP]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 9804419] [evidence IMP]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9804419] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 10481174] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9804419] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 7569978] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [pmid 11717165] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 9804419] [evidence IPI]; Interacting selectively with alpha-actinin, one of a family of proteins that cross-link F-actin as antiparallel homodimers. Alpha-actinin has a molecular mass of 93-103 KDa; at the N-terminus there are two calponin homology domains, at the C-terminus there are two EF-hands. These two domains are connected by the rod domain. This domain is formed by triple-helical spectrin repeats [goid 51393] [pmid 10481174] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HMERF; EOMFC; LGMD2J; CMPD4; FLJ39564; CMD1G; TMD; FLJ43066; FLJ26409; CMH9; FLJ26020; DKFZp451N061; FLJ32040; FLJ34413	HMERF; LGMD2J; MPRM; CMPD4; CMD1G; TMD; CMH9; DKFZp451N061; FLJ32040
Homo sapiens	RefSeq	NM_019851.1	ILMN_166536	FGF20	NM_019851.1	NM_019851.1		26281	9789946	NM_019851.1	FGF20	NP_062825.1	ILMN_2153061	0004730437	S	435	TCAGTGTGGCAGTGGGACTGGTCAGTATTAGAGGTGTGGACAGTGGTCTC	8	-	16897573-16897622	8p22b	Homo sapiens fibroblast growth factor 20 (FGF20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1697263] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9139660] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10913340] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10913340] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10913340] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10913340] [evidence TAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 15592430] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Homo sapiens	RefSeq	XM_939381.1	ILMN_174218	COBRA1	XM_001133009.1	XM_001133009.1		25920	113421276	XM_001133009.1	COBRA1	XP_001133009.1	ILMN_1732210	0001070348	I	710	ACGCTGAGCAGTTAGTGTGGCTCTGGCCCTTGGACCCCTCTGCTAACTGT				9q34.3f	PREDICTED: Homo sapiens cofactor of BRCA1 (COBRA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]		
Homo sapiens	RefSeq	XM_001715311.1	ILMN_338209	LOC100128485	XM_001715311.1	XM_001715311.1		100128485	169206193	XM_001715311.1	LOC100128485	XP_001715363.1	ILMN_3256674	0005720541	M	623	CCAGGACCTGCACCTCCGCCATCTTCGGCAGCCGCTTGGGAAAGCTTCAG				13q21.1b	PREDICTED: Homo sapiens similar to conserved hypothetical protein (LOC100128485), mRNA.					
Homo sapiens	RefSeq	NM_014569.2	ILMN_18450	ZFP95	NM_014569.2	NM_014569.2		23660	21483180	NM_014569.2	ZFP95	NP_055384.1	ILMN_1759423	0002510242	I	7	TTTGAATGGCTTTGGGATGGAGCAGGGGAGAGAGTGGCTCCGTTTGCCTC	7	+	98940546-98940595	7q22.1b	Homo sapiens zinc finger protein 95 homolog (mouse) (ZFP95), transcript variant 1, mRNA.				MGC33710; KIAA1015	MGC33710; KIAA1015
Homo sapiens	RefSeq	XM_001129617.1	ILMN_170515	LOC729189	XM_001129617.1	XM_001129617.1		729189	113411423	XM_001129617.1	LOC729189	XP_001129617.1	ILMN_3238438	0005340452	S	7	CCAACTATTCCTGTTTTACCCCAAACCGGGAACCAGCTGGGAGGTCCTCC	1	-	147646552-147646574:147647115-147647141	1q21.1e	PREDICTED: Homo sapiens hypothetical LOC729189 (LOC729189), mRNA.					
Homo sapiens	RefSeq	XM_941802.1	ILMN_43117	LOC652369	XM_941802.1	XM_941802.1		652369	89062709	XM_941802.1	LOC652369	XP_946895.1	ILMN_1721592	0002320736	S	7	GAGGGCGCACACTGCCCACAATCTAGGAAGGGCATGAAAACGGACCTCCA					PREDICTED: Homo sapiens similar to GRG protein (ESP1 protein) (Amino enhancer of split) (R-esp1) (LOC652369), mRNA.					
Homo sapiens	RefSeq	NM_032609.2	ILMN_2510	COX4I2	NM_032609.2	NM_032609.2		84701	17999525	NM_032609.2	COX4I2	NP_115998.2	ILMN_1815634	0003360333	S	324	GTACCGGCTCCAGTTCAATGAGACCTTTGCGGAGATGAACCGTCGCTCCA	20	+	29694869-29694918	20q11.21b	Homo sapiens cytochrome c oxidase subunit IV isoform 2 (lung) (COX4I2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2) [goid 5751] [pmid 11311561] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 11311561] [evidence NAS]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [pmid 11911854] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 11311561] [evidence NAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [pmid 11311561] [evidence IDA]	COX4L2; COX4-2; COXIV-2; dJ857M17.2; COX4; COX4B	COX4L2; COX4-2; COXIV-2; dJ857M17.2; COX4; COX4B
Homo sapiens	Unigene	Hs.577295	ILMN_129476	HS.577295	Hs.577295		Hs.577295		1102134	H94501			ILMN_1913214	0001300180	S	163	GTTTTGCTCTGTAGCCTAGGCTGGAGTGAGAGAGTGAGACCCTGTCTcaa	11	+	57230220-57230243:57230758-57230783		yv19g07.s1 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGE:243228 3 similar to contains MER37 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	XR_039730.1	ILMN_342949	KRT18P26	XR_039730.1	XR_039730.1		729634	169163979	XR_039730.1	KRT18P26		ILMN_3262193	0003290035	M	845	CAGTCTGCCAAGGTTGGAGCTGCTGAGATGATGCTCATGAAACTGAGACG				2p13.1b	PREDICTED: Homo sapiens misc_RNA (KRT18P26), miscRNA.					
Homo sapiens	RefSeq	XR_039730.1	ILMN_342949	KRT18P26	XR_039730.1	XR_039730.1		729634	169163979	XR_039730.1	KRT18P26		ILMN_3185725	0006350010	A	758	TATGATTAGCTGCCTCAGAAGAGCCGAGAGGAGCCAGACAAGTACTGCTC				2p13.1b	PREDICTED: Homo sapiens misc_RNA (KRT18P26), miscRNA.					
Homo sapiens	RefSeq	NM_177437.1	ILMN_165281	TAS2R60	NM_177437.1	NM_177437.1		338398	28973794	NM_177437.1	TAS2R60	NP_803186.1	ILMN_1715923	0002190601	S	519	CCATCTACAACCTTGGAATGTCACTGGCGATAGCATACGGAGCTACTGTG	7	+	142851186-142851235	7q35a	Homo sapiens taste receptor, type 2, member 60 (TAS2R60), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required to receive a bitter taste stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 50913] [pmid 12584440] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 12584440] [evidence NAS]	MGC119155; T2R56; T2R60; MGC119154	MGC119155; T2R56; T2R60; MGC119154
Homo sapiens	RefSeq	NM_032119.1	ILMN_15520	GPR98	NM_032119.3	NM_032119.3		84059	113722119	NM_032119.3	GPR98	NP_115495.3	ILMN_1690621	0003360750	S	18986	GGAGGATACCCATCGCCGACACTCACCTGTAGCACCTCACTAACCATTCG	5	+	90035327-90035368:90035962-90035969	5q14.3h	Homo sapiens G protein-coupled receptor 98 (GPR98), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16434480] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 10976914] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 11606593] [evidence NAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 14740321] [evidence IMP]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 11606593] [evidence NAS]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [pmid 14740321] [evidence IMP]; The process by which the identity of an organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 48496] [pmid 15671307] [evidence IMP]; A organ system process carried out by any of the organs or tissues of neurological system [goid 50877] [pmid 12402266] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 11606593] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10976914] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16434480] [evidence IPI]	FEB4; USH2B; USH2C; KIAA0686; MASS1; DKFZp761P0710; VLGR1b; VLGR1	FEB4; KIAA0686; GPR98; USH2C; DKFZp761P0710; VLGR1
Homo sapiens	RefSeq	NM_032765.2	ILMN_13905	TRIM52	NM_032765.2	NM_032765.2		84851	34147443	NM_032765.2	TRIM52	NP_116154.1	ILMN_1754130	0006130044	S	1843	CAGTGGAGTGTTCTGCAAAGCCCGATTCTCTGCAGCTTTAAGACTGGACA	5	-	180683721-180683770	5q35.3g	Homo sapiens tripartite motif-containing 52 (TRIM52), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF102; MGC16175	RNF102; MGC16175
Homo sapiens	RefSeq	NM_020776.1	ILMN_20308	KIAA1328	NM_020776.1	NM_020776.1		57536	55749714	NM_020776.1	KIAA1328	NP_065827.1	ILMN_1745389	0007560022	S	4705	CAGAGCTGGACGAAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCT	18	+	33059137-33059186	18q12.2b	Homo sapiens KIAA1328 (KIAA1328), mRNA.					
Homo sapiens	RefSeq	XM_291974.2	ILMN_22133	LOC338750	XM_291974.2	XM_291974.2		338750	37541727	XM_291974.2	LOC338750	XP_291974.2	ILMN_1658058	0001440382	S	1	ATGAATGATGAGGGGGTTGAAGCAGATGAAATTAAGAGCAATGAAACCCA	11	-	13736431-13736480		PREDICTED: Homo sapiens hypothetical LOC338750 (LOC338750), mRNA.					
Homo sapiens	RefSeq	NM_022917.4	ILMN_175447	NOL6	NM_022917.4	NM_022917.4		65083	39777587	NM_022917.4	NOL6	NP_075068.2	ILMN_1665442	0003370382	I	3111	CCCTTGGACATTTACGACGTGCTGATTCGCCTGTCTCCTCGCCATATCCC	9	-	33463864-33463913	9p13.3e	Homo sapiens nucleolar protein family 6 (RNA-associated) (NOL6), transcript variant alpha, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 11895476] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11895476] [evidence ISS]; A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [evidence ISS]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11895476] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	MGC20838; NRAP; MGC14921; bA311H10.1; MGC14896; UTP22; FLJ21959	MGC20838; NRAP; MGC14921; bA311H10.1; MGC14896; UTP22; FLJ21959
Homo sapiens	RefSeq	XR_039488.1	ILMN_342130	LOC100134812	XR_039488.1	XR_039488.1		100134812	169170608	XR_039488.1	LOC100134812		ILMN_3241345	0001300307	S	17	GGGCAGTCATAGCTCATTGTAACATAGAGCTCCTGGGTTCAAGCCATCCT	7	-	104003102-104003151		PREDICTED: Homo sapiens misc_RNA (LOC100134812), miscRNA.					
Homo sapiens	Unigene	Hs.542495	ILMN_106329	HS.542495	Hs.542495		Hs.542495		10939041	BF109351			ILMN_1866319	0004260717	S	237	CCTTACAACAACTGGTTGAGGTGGGGACAGTTATTTTCATTTTCAGGTGC	20	-	5336235-5336284		7l51e12.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:3524855 3, mRNA sequence					
Homo sapiens	RefSeq	NM_012114.1	ILMN_10570	CASP14	NM_012114.1	NM_012114.1		23581	6912285	NM_012114.1	CASP14	NP_036246.1	ILMN_1739513	0005670300	S	576	CGCCTACCGACATGATCAGAAAGGCTCATGCTTTATCCAGACCCTGGTGG	19	+	15027248-15027297	19p13.12b	Homo sapiens caspase 14, apoptosis-related cysteine peptidase (CASP14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 10203698] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 10203698] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC119078; MGC119079	MGC119078; MGC119079
Homo sapiens	Unigene	Hs.438858	ILMN_92075	HS.438858	Hs.438858		Hs.438858		34534878	AK127804			ILMN_1851453	0000270521	S	4006	CTTACCAATCAGTAACTTCACTATCACTCAGGGCTTTCGTACCTTCTAGG	9	-	3208950-3208999		Homo sapiens cDNA FLJ45905 fis, clone OCBBF3026576					
Homo sapiens	RefSeq	NM_032332.2	ILMN_18043	MORG1	NM_032332.2	NM_032332.2		84292	39725650	NM_032332.2	MORG1	NP_115708.1	ILMN_1719763	0001190609	S	965	GCTGAAGCCAGGGGACCCACCAACAGGACCAAGGACCGAGACACAGACAT	19	+	12647482-12647486:12647487-12647531	19p13.13c	Homo sapiens mitogen-activated protein kinase organizer 1 (MORG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 11991638] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 11991638] [evidence IDA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 11991638] [evidence IDA]	MGC4238	MGC4238
Homo sapiens	RefSeq	NM_004044.4	ILMN_23084	ATIC	NM_004044.4	NM_004044.4		471	39725714	NM_004044.4	ATIC	NP_004035.2	ILMN_1673991	0001770546	S	1671	CGTAGACAGAGCTAAAAGGAGTGGTGTGGCGTACATTGCGGCTCCCTCCG	2	+	215922199-215922217:215922504-215922534	2q35a	Homo sapiens 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (ATIC), mRNA.		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 8567683] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate [goid 6188] [evidence IEA]	Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide [goid 3937] [pmid 8567683] [evidence TAS]; Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide [goid 4643] [pmid 8567683] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PURH; IMPCHASE; AICARFT; AICAR	PURH; AICARFT; AICAR; IMPCHASE
Homo sapiens	RefSeq	XR_001071.1	ILMN_37259	LOC497256	XR_001071.1	XR_001071.1		497256	89029880	XR_001071.1	LOC497256		ILMN_1786564	0006400445	S	253	TTGGTGGCAGCTCGCCTTGCTGTGGTTGGTGGTGACGTCGGAGACTGCAG	9	+	89918719-89918768		PREDICTED: Homo sapiens hypothetical LOC497256 (LOC497256), misc RNA.					
Homo sapiens	RefSeq	XM_933781.3	ILMN_36341	LOC646626	XM_933781.3	XM_933781.3		646626	169161377	XM_933781.3	LOC646626	XP_938874.1	ILMN_3230582	0005130678	I	768	GAATGTCCACTATGTGCCAGACACTGTTCTAGGTGCTAGGAAAACAGCTG	1	+	85516379-85516428	1p22.3e	PREDICTED: Homo sapiens hypothetical LOC646626 (LOC646626), mRNA.					
Homo sapiens	RefSeq	NM_001029885.1	ILMN_173353	LOC727825	XR_015127.1	XR_015127.1		727825	113411815	XR_015127.1	LOC727825		ILMN_1681325	0001030373	S	1854	GACTCTGCTACACCCAGTGAAATGCTGTGTCCCTTCTCCCCCGTGCCCCT	1	-	24038-24087		PREDICTED: Homo sapiens hypothetical protein LOC727825 (LOC727825), mRNA.					MGC10334
Homo sapiens	RefSeq	NM_002877.4	ILMN_14566	RAD51L1	NM_002877.4	NM_002877.4		5890	46255036	NM_002877.4	RAD51L1	NP_002868.1	ILMN_1727831	0007400309	I	1386	GCACTGACAATGGGCACACAGGGAACAGGAAATGGGAATGAGAGCAAGGG	14	+	68033879-68033928	14q24.1a-q24.1c	Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9512535] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9512535] [evidence TAS]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9441753] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9512535] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC34245; hREC2; RAD51B; R51H2; REC2	R51H2; REC2; MGC34245; hREC2; RAD51B
Homo sapiens	RefSeq	NM_198991.1	ILMN_19231	KCTD1	NM_198991.1	NM_198991.1		284252	40217616	NM_198991.1	KCTD1	NP_945342.1	ILMN_1759984	0000430386	S	1688	AATAAGGTCTGTGTGAAACACACATGTGGGGGTGAGGCTGGATTAAAGTG	18	-	22288881-22288930	18q11.2e	Homo sapiens potassium channel tetramerisation domain containing 1 (KCTD1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C18orf5	C18orf5
Homo sapiens	RefSeq	NM_198991.1	ILMN_19231	KCTD1	NM_198991.1	NM_198991.1		284252	40217616	NM_198991.1	KCTD1	NP_945342.1	ILMN_1692365	0000070025	S	1173	AAACACGGGTGACAGCCGCAGTTGGTGCTGTGAAAGTGGCGAGAAGTGTC	18	-	22289396-22289445	18q11.2e	Homo sapiens potassium channel tetramerisation domain containing 1 (KCTD1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C18orf5	C18orf5
Homo sapiens	Unigene	Hs.526948	ILMN_100834	HS.526948	Hs.526948		Hs.526948		82153772	DA934455			ILMN_1914637	0004050168	S	235	GGCCAAGCCACAGGATGAAAGGAGCTGCATCTTTGAGTCACCACTGGAGA	6	+	26106167-26106216		DA934455 SPLEN2 Homo sapiens cDNA clone SPLEN2005266 5, mRNA sequence					
Homo sapiens	RefSeq	NM_203472.1	ILMN_13612	SELS	NM_203472.1	NM_203472.1		55829	45439348	NM_203472.1	SELS	NP_982298.1	ILMN_1784534	0003420037	I	1145	ACACATCGCATGAGTAGAGGGGCTCTGGGTCGGGGTTTCATATGCAGCAG	15	-	101811311-101811360	15q26.3d	Homo sapiens selenoprotein S (SELS), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 15215856] [evidence IDA]; A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver [goid 34361] [pmid 17374524] [evidence IDA]; A lipoprotein particle, rich in cholesterol esters and low in triglycerides that is typically composed of APOB100 and APOE and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm. LDL particles are formed from VLDL particles (via IDL) by the loss of triacylglycerol and gain of cholesterol ester. They transport endogenous cholesterol (and to some extent triglycerides) from peripheral tissues back to the liver [goid 34362] [pmid 17374524] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 17210132] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence ISS];  [goid 6980] [pmid 15063746] [evidence IDA]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [pmid 17210132] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [pmid 15063746] [evidence IEP]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 15215856] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [pmid 15215856] [evidence IDA]; The directed movement of unfolded or misfolded proteins from the endoplasmic reticulum to the cytosol through the translocon [goid 30970] [pmid 15215856] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [evidence ISS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [evidence ISS]; The directed movement of a protein to a specific location [goid 45184] [pmid 15215856] [evidence TAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [pmid 15063746] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 15215856] [evidence NAS]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [pmid 15063746] [evidence IDA]; Interacting selectively with any enzyme [goid 19899] [pmid 15215856] [evidence IPI]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	SEPS1; ADO15; MGC2553; SBBI8; VIMP; AD-015; MGC104346	SEPS1; ADO15; MGC2553; SBBI8; VIMP; AD-015; MGC104346
Homo sapiens	Unigene	Hs.539595	ILMN_104612	HS.539595	Hs.539595		Hs.539595		10985468	BF115992			ILMN_1904606	0003390176	S	31	CATGCATCGTAGCATCAAAGATAAGAAGTGAAAACCCAAAGATGTAGTTA					7n76a06.x1 NCI_CGAP_Ov18 Homo sapiens cDNA clone IMAGE:3570346 3, mRNA sequence					
Homo sapiens	Unigene	Hs.209381	ILMN_82096	HS.209381	Hs.209381		Hs.209381		5438265	AI819186			ILMN_1876778	0003360017	S	457	GAGGTCCCAATCTGTGCTCCTAGCAAGGGCTGTCTGTGGCTGTCAGTGAA	2	+	113686271-113686320		wj32d10.x1 NCI_CGAP_Kid12 Homo sapiens cDNA clone IMAGE:2404531 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014385.1	ILMN_9892	SIGLEC7	NM_016543.2	NM_016543.2		27036	118197278	NM_016543.2	SIGLEC7	NP_057627.2	ILMN_1681415	0001770601	A	1095	CCAGTATGCACCCCTCAGCTTTCATAAGGGGGAGCCTCAGGACCTATCAG	19	+	51656403-51656452	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 7 (SIGLEC7), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10567377] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10499918] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 10567377] [evidence TAS]	CD328; D-siglec; QA79; p75; AIRM1; p75/AIRM1; CDw328; SIGLEC-7	QA79; p75; AIRM1; p75/AIRM1; CDw328; SIGLEC-7
Homo sapiens	RefSeq	NM_016543.2	ILMN_9892	SIGLEC7	NM_016543.2	NM_016543.2		27036	118197278	NM_016543.2	SIGLEC7	NP_057627.2	ILMN_2409384	0007320364	A	1122	GGGGGAGCCTCAGGACCTATCAGGACAAGAAGCCACCAACAATGAGTACT	19	+	51656430-51656479	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 7 (SIGLEC7), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10567377] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10499918] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 10567377] [evidence TAS]	CD328; D-siglec; QA79; p75; AIRM1; p75/AIRM1; CDw328; SIGLEC-7	CD328; D-siglec; QA79; p75; AIRM1; p75/AIRM1; CDw328; SIGLEC-7
Homo sapiens	RefSeq	NM_001007188.1	ILMN_26325	DEPDC5	NM_001007188.1	NM_001007188.1		9681	55749923	NM_001007188.1	DEPDC5	NP_001007189.1	ILMN_1721084	0005310703	I	2150	CTGGACTCGAGGGATCCACCCATTGGCCTCCAAAAGTGCTGAGATTACAG	22	+	30541743-30541792	22q12.2c-q12.3a	Homo sapiens DEP domain containing 5 (DEPDC5), transcript variant 2, mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		DEP.5; DKFZp779P2027	DEP.5; DKFZp779P2027
Homo sapiens	RefSeq	NM_001007188.1	ILMN_26325	DEPDC5	NM_001007188.1	NM_001007188.1		9681	55749923	NM_001007188.1	DEPDC5	NP_001007189.1	ILMN_1800711	0002630603	A	1737	TCCTGATGATCCCACACCCCCACCTGCACCAGTATGAAGTCAGCAGCTCC	22	+	30541127-30541176	22q12.2c-q12.3a	Homo sapiens DEP domain containing 5 (DEPDC5), transcript variant 2, mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		DEP.5; DKFZp779P2027	DEP.5; DKFZp779P2027
Homo sapiens	RefSeq	NM_007008.2	ILMN_19851	RTN4	NM_007008.2	NM_007008.2		57142	47519538	NM_007008.2	RTN4	NP_008939.1	ILMN_1730611	0002230161	A	1389	GACCTTTACCTTCCAGCCACCCCACAGTGCTTGATATTTCAGAGTCAGTC	2	-	55199667-55199716	2p16.1d	Homo sapiens reticulon 4 (RTN4), transcript variant 3, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 11126360] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11126360] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 10667797] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [pmid 11126360] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [pmid 15034570] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [pmid 10667797] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 11126360] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11126360] [evidence IPI]	RTN4-B1; Nbla10545; RTN-X; Nogo-C; NSP; ASY; RTN4-A; NSP-CL; NOGOC; Nbla00271; NI220/250; RTN4-C; RTN4-B2; NOGO-A; Nogo-B; NOGO	RTN4-B1; Nbla10545; RTN-X; Nogo-C; NSP; ASY; RTN4-A; NSP-CL; NOGOC; Nbla00271; NI220/250; RTN4-C; RTN4-B2; NOGO-A; Nogo-B; NOGO
Homo sapiens	RefSeq	NM_007008.2	ILMN_19851	RTN4	NM_007008.2	NM_007008.2		57142	47519538	NM_007008.2	RTN4	NP_008939.1	ILMN_1748983	0006770189	I	70	CTGCAGTTGTGCAGCAGAGGAGACTGCAGACTTCGGTTGAGGAAACGGGT	2	-	55237351-55237400	2p16.1d	Homo sapiens reticulon 4 (RTN4), transcript variant 3, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 11126360] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11126360] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 10667797] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [pmid 11126360] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [pmid 15034570] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [pmid 10667797] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 11126360] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11126360] [evidence IPI]	RTN4-B1; Nbla10545; RTN-X; Nogo-C; NSP; ASY; RTN4-A; NSP-CL; NOGOC; Nbla00271; NI220/250; RTN4-C; RTN4-B2; NOGO-A; Nogo-B; NOGO	RTN4-B1; Nbla10545; RTN-X; Nogo-C; NSP; ASY; RTN4-A; NSP-CL; NOGOC; Nbla00271; NI220/250; RTN4-C; RTN4-B2; NOGO-A; Nogo-B; NOGO
Homo sapiens	Unigene	Hs.571035	ILMN_123216	HS.571035	Hs.571035		Hs.571035		23271573	BC033504			ILMN_1897890	0006520315	S	1200	GCAGAGGCAGCACAGGGAGGTAAAGCAATGGAAAAGATCGCAGGGAGTCC	6	-	163391970-163392019		Homo sapiens, clone IMAGE:5168221, mRNA					
Homo sapiens	RefSeq	NM_030792.4	ILMN_16210	GDPD5	NM_030792.5	NM_030792.5		81544	142372831	NM_030792.5	GDPD5	NP_110419.4	ILMN_1701643	0001010176	S	3237	GTGTCCAGCAGACCTCAAGGCAGAAGGGTCACCTAACCCAGGAGTCCACA	11	-	74823488-74823537	11q13.4c-q13.5a	Homo sapiens glycerophosphodiester phosphodiesterase domain containing 5 (GDPD5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PP1665; GDE2	PP1665; GDE2
Homo sapiens	RefSeq	NM_032030.1	ILMN_1877	FKSG83	NM_032030.1	NM_032030.1		83954	14042950	NM_032030.1	FKSG83	NP_114419.1	ILMN_1709722	0002060446	S	1072	ATTTAGTCCTTTGGCCTGGGAGGTCCAGGCTGCAATGAGCCAAGATCACG	6	+	27401628-27401677	6p22.1c	Homo sapiens FKSG83 (FKSG83), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]	MGC129573	MGC129573
Homo sapiens	RefSeq	NM_017556.2	ILMN_28540	FBLIM1	NM_017556.2	NM_017556.2		54751	66932981	NM_017556.2	FBLIM1	NP_060026.2	ILMN_1799471	0004010653	I	3	ACGGGCGGAGGGGACGGGAGGCCCAGCGGCTCCGGGCTCCGCTGGCTCGG	1	+	15957844-15957893	1p36.21a	Homo sapiens filamin binding LIM protein 1 (FBLIM1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434G171; CAL; RP11-169K16.5; FBLP1; FBLP-1	DKFZp434G171; CAL; RP11-169K16.5; FBLP1; FBLP-1
Homo sapiens	RefSeq	NR_024031.1	ILMN_366695	KIAA0114	NR_024031.1	NR_024031.1		57291	194394211	NR_024031.1	KIAA0114		ILMN_3248882	0004150110	S	623	TCTGGGTGGCACGGGGGAGGTCATGAGAAACGTGGATTACACCCCCTTGT	4	+	53580073-53580122		Homo sapiens KIAA0114 (KIAA0114), non-coding RNA.					
Homo sapiens	Unigene	Hs.202577	ILMN_81803	HS.202577	Hs.202577		Hs.202577		21750379	AK091904			ILMN_1878029	0000240392	S	2294	CATGGGCAAAATCTAGCCACAGTCCTGAGAGTCCAGGCTTCTGGGATGCC	3	-	115533712-115533761		Homo sapiens cDNA FLJ34585 fis, clone KIDNE2008758					
Homo sapiens	RefSeq	XM_944889.1	ILMN_43073	WDR43	XM_944889.1	XM_944889.1		23160	88954702	XM_944889.1	WDR43	XP_949982.1	ILMN_1671442	0003130400	A	1384	GAAGACCTCCAGACGAATAGCTTTCCAGTTCTTCTTACCCAGGGCTTAGA				2p23.2a	PREDICTED: Homo sapiens WD repeat domain 43, transcript variant 8 (WDR43), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	RefSeq	XR_000996.1	ILMN_166271	CYP4Z2P	XR_017801.1	XR_017801.1		163720	113412057	XR_017801.1	CYP4Z2P		ILMN_1702829	0003460653	I	1438	GAGCTGGCTCCAGACTACTCAAGGCCTCCCCAGCCTGTTCGTCAAATGCT				1p33d	PREDICTED: Homo sapiens cytochrome P450 4Z2 pseudogene (CYP4Z2P), misc RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]		
Homo sapiens	RefSeq	XM_942395.1	ILMN_166271	CYP4Z2P	XR_017801.1	XR_017801.1		163720	113412057	XR_017801.1	CYP4Z2P		ILMN_1760265	0006900441	I	416	GCCACTAAAAGCAACCTGTGCCTCCTGGGTTCAAAGTGTCTATTGTTGCC				1p33d	PREDICTED: Homo sapiens cytochrome P450 4Z2 pseudogene (CYP4Z2P), misc RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]		
Homo sapiens	RefSeq	XM_001713717.1	ILMN_346321	LOC730074	XM_001713717.1	XM_001713717.1		730074	169169250	XM_001713717.1	LOC730074	XP_001713769.1	ILMN_3226769	0003290025	A	787	ATGGGCAGATTGCTGACTGAACCAGTGCACTGGATAGCATTCAGCCTCAT	6	-	158670-158719		PREDICTED: Homo sapiens hypothetical LOC730074 (LOC730074), mRNA.					
Homo sapiens	RefSeq	NM_025158.2	ILMN_28219	RUFY1	NM_025158.2	NM_025158.2		80230	22095370	NM_025158.2	RUFY1	NP_079434.2	ILMN_1659777	0002030079	S	2215	AATTTCTTGCCCGGTCACTGGCATTCCAGAAGACAGCGTGCCGGAACCGG	5	+	178969230-178969279	5q35.3d	Homo sapiens RUN and FYVE domain containing 1 (RUFY1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZFYVE12; RABIP4; FLJ22251	ZFYVE12; RABIP4; FLJ22251
Homo sapiens	RefSeq	XR_016072.1	ILMN_172542	LOC730066	XR_016072.1	XR_016072.1		730066	113428383	XR_016072.1	LOC730066		ILMN_3227407	0000110414	A	477	GGCTGCTGGGATGTGGCCATGGGAACGATCTTCTTATCGCAGACTGTACT	19	+	58698460-58698509	19q13.41b	PREDICTED: Homo sapiens misc_RNA (LOC730066), miscRNA.					
Homo sapiens	RefSeq	NM_182493.1	ILMN_23653	MYLK3	NM_182493.2	NM_182493.2		91807	146219831	NM_182493.2	MYLK3	NP_872299.2	ILMN_1718193	0002490026	S	2329	GGCTCTCGGAGGAGGCCAAGGACTTTGTTTCCCGGTTGCTGGTCAAAGAG	16	-	46744553-46744602	16q11.2i	Homo sapiens myosin light chain kinase 3 (MYLK3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	caMLCK; MGC126319; MLCK2; MGC126320; MLCK	MGC126319; MLCK2; MGC126320
Homo sapiens	RefSeq	NM_001012727.1	ILMN_7769	AGPAT2	NM_001012727.1	NM_001012727.1		10555	69122970	NM_001012727.1	AGPAT2	NP_001012745.1	ILMN_2377430	0005560102	A	1250	TGGGCTCCAGGGTCCAGCCCACAAGCTGCATCAGGCTCTCTGGGAGAGGA	9	-	139567747-139567796	9q34.3d-q34.3e	Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) (AGPAT2), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9242711] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phosphatidic acid, any derivative of glycerol phosphate in which both the remaining hydroxyl groups of the glycerol moiety are esterified with fatty acids [goid 6654] [pmid 9212163] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence ISS]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [pmid 9461603] [evidence NAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol [goid 46027] [pmid 9242711] [evidence EXP]; Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [evidence ISS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	LPAAB; LPAAT-beta; BSCL1; BSCL; 1-AGPAT2	LPAAB; BSCL1; 1-AGPAT2; LPAAT-beta; BSCL
Homo sapiens	RefSeq	NM_004719.1	ILMN_17493	SFRS2IP	NM_004719.1	NM_004719.1		9169	4759171	NM_004719.1	SFRS2IP	NP_004710.1	ILMN_1679086	0005080181	S	5258	CACCTATTGTATGACCAAATAAAGGTTATGCTGCTTGTTACGCGAAGGCC				12q12h-q13.11a	Homo sapiens splicing factor, arginine/serine-rich 2, interacting protein (SFRS2IP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 9224939] [evidence TAS]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9447963] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 9447963] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9447963] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9447963] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9447963] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	SIP1; CASP11; SRRP129	SIP1; CASP11; SRRP129
Homo sapiens	RefSeq	NM_032454.1	ILMN_5186	STK19	NM_004197.1	NM_004197.1		8859	4759179	NM_004197.1	STK19	NP_004188.1	ILMN_1659782	0004640142	A	1311	TTGGGAAGGCTTGGGAGCCAGGATGAGTGTCGGGCTCTCGTGTGTGCAAA	6	+	31948914-31948963	6p21.32b	Homo sapiens serine/threonine kinase 19 (STK19), transcript variant 1, mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RP1; G11; D6S60; HLA-RP1; MGC117388; D6S60E	RP1; G11; D6S60E; D6S60; HLA-RP1; MGC117388
Homo sapiens	RefSeq	NM_004197.1	ILMN_5186	STK19	NM_004197.1	NM_004197.1		8859	4759179	NM_004197.1	STK19	NP_004188.1	ILMN_2402363	0004260612	A	1440	GGAAAGTGGAACCAGAAATGGTGCCAAGGCTGTGGCTGTTCCCTTTCGTG	6	+	31949043-31949092	6p21.32b	Homo sapiens serine/threonine kinase 19 (STK19), transcript variant 1, mRNA.			Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RP1; G11; D6S60; HLA-RP1; MGC117388; D6S60E	RP1; G11; D6S60E; D6S60; HLA-RP1; MGC117388
Homo sapiens	RefSeq	NM_006545.4	ILMN_11555	TUSC4	NM_006545.4	NM_006545.4		10641	50592991	NM_006545.4	TUSC4	NP_006536.3	ILMN_2191568	0005960722	S	1473	AGACAGGCATGAGCTACCATGAGCTGGATGAGCGGCTTGAAAATGACCCC	3	-	50385060-50385104:50385190-50385194	3p21.31b	Homo sapiens tumor suppressor candidate 4 (TUSC4), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	NPR2L; NPRL2	NPR2L; NPRL2
Homo sapiens	RefSeq	XM_935297.1	ILMN_45915	LOC646144	XM_935297.1	XM_935297.1		646144	89025363	XM_935297.1	LOC646144	XP_940390.1	ILMN_1690672	0000730184	I	731	AGTCCTGTAATCTTATGTTCATGGGCTTTTACACAATGGAGTTACTGTTC	7	+	128050949-128050998		PREDICTED: Homo sapiens similar to tousled-like kinase 2, transcript variant 3 (LOC646144), mRNA.					
Homo sapiens	RefSeq	XM_927468.1	ILMN_38707	LOC644295	XM_927468.1	XM_927468.1		644295	89037300	XM_927468.1	LOC644295	XP_932561.1	ILMN_1700387	0006940593	S	2060	GTCTAGGGGAGACAGGGTAGCTTCTTGATGGCCGGTGGTGTCTTTACCTG	14	-	31809269-31809318	14q13.1a	PREDICTED: Homo sapiens similar to T25G3.1 (LOC644295), mRNA.					
Homo sapiens	Unigene	Hs.545238	ILMN_108483	HS.545238	Hs.545238		Hs.545238		4664874	AI628074			ILMN_1891711	0005870332	S	177	CAAATGGCTGGCAGGATTGAGTCTGGTGGGTTTTCCACAGGGCTCCCCAC	8	-	127168642-127168691		ty84b12.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2285759 3, mRNA sequence					
Homo sapiens	RefSeq	NM_148897.1	ILMN_23893	SDR9C7	NM_148897.1	NM_148897.1		121214	22507404	NM_148897.1	SDR9C7	NP_683695.1	ILMN_1739882	0005390397	S	440	TGGTCAAGAGAGCCCGGGGCAGGGTTGTCAACATGTCCAGCTCTGGTGGT	12	-	57324080-57324129	12q13.3a	Homo sapiens short chain dehydrogenase/reductase family 9C, member 7 (SDR9C7), mRNA.				MGC126602; SDRO; FLJ16333; RDHS; MGC126600	MGC126602; SDRO; FLJ16333; RDHS; MGC126600
Homo sapiens	RefSeq	NM_148897.1	ILMN_23893	SDR9C7	NM_148897.1	NM_148897.1		121214	22507404	NM_148897.1	SDR9C7	NP_683695.1	ILMN_2133090	0001260072	S	601	GAGCCAGGGAACTATCGGACAGCCATTCTCGGCAAGGAGAACCTGGAGTC	12	-	57323247-57323296	12q13.3a	Homo sapiens short chain dehydrogenase/reductase family 9C, member 7 (SDR9C7), mRNA.				MGC126602; SDRO; FLJ16333; RDHS; MGC126600	MGC126602; SDRO; FLJ16333; RDHS; MGC126600
Homo sapiens	RefSeq	NM_148897.1	ILMN_23893	SDR9C7	NM_148897.1	NM_148897.1		121214	22507404	NM_148897.1	SDR9C7	NP_683695.1	ILMN_3249101	0001230139	S	673	AGGCTGCCTCAGGAGACCCGGGACAGCTACGGAGAGGATTATTTCCGCAT	12	-	57323175-57323224	12q13.3a	Homo sapiens short chain dehydrogenase/reductase family 9C, member 7 (SDR9C7), mRNA.				MGC126602; SDRO; FLJ16333; RDHS; MGC126600	MGC126602; SDRO; FLJ16333; RDHS; MGC126600
Homo sapiens	RefSeq	NM_025165.2	ILMN_26458	ELL3	NM_025165.2	NM_025165.2		80237	76781448	NM_025165.2	ELL3	NP_079441.1	ILMN_1771264	0002000102	S	1771	GGGTATGGGCACTGTGCAAAGACTCCATAGCTGTGCCTAGGAGTCTAGGA	15	-	44065090-44065139	15q15.3b	Homo sapiens elongation factor RNA polymerase II-like 3 (ELL3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10882741] [evidence IDA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [pmid 10882741] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 10882741] [evidence IDA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10882741] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of global transcription from an RNA polymerase II promoter [goid 45817] [pmid 10882741] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10882741] [evidence NAS]; Any activity that increases the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 8159] [pmid 10882741] [evidence IDA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule catalyzed by RNA polymerase II following transcription initiation [goid 16944] [pmid 10882741] [evidence IDA]	FLJ22637	FLJ22637
Homo sapiens	RefSeq	NM_181840.1	ILMN_6855	KCNK18	NM_181840.1	NM_181840.1		338567	32469494	NM_181840.1	KCNK18	NP_862823.1	ILMN_1766103	0005290070	S	700	CTAGAGAAACAGAACACACTGCAACTGCCCCCACAAGCCATGGAGAGGAG	10	+	118959122-118959171	10q25.3b	Homo sapiens potassium channel, subfamily K, member 18 (KCNK18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	TRESK; TRIK; TRESK-2; K2p18.1; TRESK2	TRESK; TRIK; TRESK-2; K2p18.1; TRESK2
Homo sapiens	RefSeq	XM_943479.1	ILMN_41921	LOC648827	XM_943479.1	XM_943479.1		648827	89039223	XM_943479.1	LOC648827	XP_948572.1	ILMN_1672765	0000360255	S	136	GAGCCACCTTGGAGGTTATACCACCATATACCACCACCCAGCTCCAGTGG					PREDICTED: Homo sapiens hypothetical protein LOC648827 (LOC648827), mRNA.					
Homo sapiens	Unigene	Hs.542408	ILMN_106277	HS.542408	Hs.542408		Hs.542408		4486531	AI554168			ILMN_1890825	0004860324	S	75	GAGATGTGCTTAGGCATCCAAGGGGAAAGGTTGAGTAGGCAGTTGGGTAT					te50c11.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2090132 3, mRNA sequence					
Homo sapiens	RefSeq	NM_152716.1	ILMN_11588	PATL1	NM_152716.1	NM_152716.1		219988	22749426	NM_152716.1	PATL1	NP_689929.1	ILMN_1680782	0005310427	S	3352	GCTGTCCTGTTCTCCATCTCCATTTCTTCCCATGCTGTAACCCCAGGCTC	11	-	59161004-59161053	11q12.1d	Homo sapiens protein associated with topoisomerase II homolog 1 (yeast) (PATL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			FLJ36874; MGC125671; MGC125672	FLJ36874; MGC125671; MGC125672
Homo sapiens	RefSeq	NM_006288.2	ILMN_22736	THY1	NM_006288.2	NM_006288.2		7070	19923361	NM_006288.2	THY1	NP_006279.2	ILMN_1779875	0006480204	S	1590	CTGAGGCAAGCCATGGAGTGAGACCCAGGAGCCGGACACTTCTCAGGAAA	11	-	118794230-118794279	11q23.3f	Homo sapiens Thy-1 cell surface antigen (THY1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2864289] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 15093746] [evidence NAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence ISS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence ISS]; Any process that activates or increases the activity of a GTPase [goid 43547] [evidence ISS]; Development of a cone cell, one of the sensory cells in the eye that reacts to the presence of light. Cone cells contain the photopigment iodopsin or cyanopsin and are responsible for photopic (daylight) vision [goid 46549] [evidence ISS]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of axonogenesis [goid 50771] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50860] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria [goid 51281] [evidence ISS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence ISS]; Interacting selectively with an integrin [goid 5178] [pmid 15004192] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7513706] [evidence IPI]; Interacting selectively with any glycosylphosphatidylinositol anchor. GPI anchors serve to attach membrane proteins to the lipid bilayer of cell membranes [goid 34235] [evidence ISS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CD90; FLJ33325	CD90; FLJ33325
Homo sapiens	RefSeq	NM_020817.1	ILMN_29934	KIAA1407	NM_020817.1	NM_020817.1		57577	24308222	NM_020817.1	KIAA1407	NP_065868.1	ILMN_2095273	0003140689	S	3520	GAGGCACCAGAGATGCTTCTCTTCCGTGCACCTTGATAAGCATGAAGGAC	3	-	115166080-115166129	3q13.31a	Homo sapiens KIAA1407 (KIAA1407), mRNA.				FLJ43314	FLJ43314
Homo sapiens	RefSeq	NM_020817.1	ILMN_29934	KIAA1407	NM_020817.1	NM_020817.1		57577	24308222	NM_020817.1	KIAA1407	NP_065868.1	ILMN_1727526	0003800438	S	3395	ATCAGTGACACGCACCCCACCAGACCTCGTCCACTTTCACCACCCCTGAA	3	-	115166205-115166254	3q13.31a	Homo sapiens KIAA1407 (KIAA1407), mRNA.				FLJ43314	FLJ43314
Homo sapiens	RefSeq	NM_001003760.2	ILMN_173577	KLHL31	NM_001003760.4	NM_001003760.4		401265	150418003	NM_001003760.4	KLHL31	NP_001003760.2	ILMN_1805522	0001660201	S	1842	CTACCTGGTGGGGGGCTGGAACGAGGGCGAGAAGAAGTACAAGAAGTGCA	6	-	53624509-53624558	6p12.1d	Homo sapiens kelch-like 31 (Drosophila) (KLHL31), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BKLHD6; bA345L23.2; KLHL; KBTBD1	BKLHD6; bA345L23.2; KLHL
Homo sapiens	Unigene	Hs.50125	ILMN_72916	HS.50125	Hs.50125		Hs.50125		13546724	BG548059			ILMN_1822117	0004590376	S	514	GCCCTGGAGCATCACTAAGAAGCAGCTAGGAACTATGGCTTGCAGACAAG	X	+	22178870-22178911:22178914-22178916:22178918-22178922		602575980F1 NIH_MGC_77 Homo sapiens cDNA clone IMAGE:4704235 5, mRNA sequence					
Homo sapiens	RefSeq	XM_117514.3	ILMN_34525	LOC203235	XM_117514.3	XM_117514.3		203235	89030127	XM_117514.3	LOC203235	XP_117514.2	ILMN_1662491	0003930021	S	325	AGGCTACGCCGAGACCAAGCGCCAGGAGAAGGGACCCAGGCCAAGCTGCT	9	+	138985798-138985847	9q34.3e	PREDICTED: Homo sapiens hypothetical LOC203235 (LOC203235), mRNA.					
Homo sapiens	RefSeq	NM_024687.1	ILMN_39389	ZBBX	NM_024687.2	NM_024687.2		79740	87196346	NM_024687.2	ZBBX	NP_078963.2	ILMN_1760503	0005910241	S	2564	ACATGTGAGGGGTCCCTGTGGAGTTGAGGAATTGAGCTGTTCTGGAAGAG	3	-	168441387-168441401:168442987-168443021	3q26.1f	Homo sapiens zinc finger, B-box domain containing (ZBBX), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ23049	
Homo sapiens	RefSeq	NM_006009.2	ILMN_1089	TUBA1A	NM_006009.2	NM_006009.2		7846	17986282	NM_006009.2	TUBA1A	NP_006000.2	ILMN_2148819	0005340187	S	1363	CGTGAGGACATGGCTGCCCTTGAGAAGGATTATGAGGAGGTTGGTGTGGA	12	-	49578835-49578884	12q13.12b	Homo sapiens tubulin, alpha 1a (TUBA1A), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	LIS3; FLJ25113; TUBA3; B-ALPHA-1	LIS3; FLJ25113; TUBA3; B-ALPHA-1
Homo sapiens	RefSeq	NM_006009.2	ILMN_1089	TUBA1A	NM_006009.2	NM_006009.2		7846	17986282	NM_006009.2	TUBA1A	NP_006000.2	ILMN_1742981	0004490577	S	776	ACCTGAATAGGTTAATAGGTCAAATTGTGTCCTCCATCACTGCTTCCCTG	12	-	49579422-49579471	12q13.12b	Homo sapiens tubulin, alpha 1a (TUBA1A), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	LIS3; FLJ25113; TUBA3; B-ALPHA-1	LIS3; FLJ25113; TUBA3; B-ALPHA-1
Homo sapiens	RefSeq	NM_001005734.1	ILMN_27527	C21ORF34	NM_001005734.1	NM_001005734.1		388815	54112413	NM_001005734.1	C21orf34	NP_001005734.1	ILMN_2283814	0006400750	I	130	TTGTGGAAGGGGCCTCTGGGTGGCAGCTCTGGGCTTTTGGGTGTTGGACA	21	+	16488699-16488748	21q21.1b	Homo sapiens chromosome 21 open reading frame 34 (C21orf34), transcript variant 3, mRNA.				FLJ38295; C21orf35	FLJ38295; C21orf35
Homo sapiens	RefSeq	NM_001005732.1	ILMN_27527	C21ORF34	NM_001005734.1	NM_001005734.1		388815	54112413	NM_001005734.1	C21orf34	NP_001005734.1	ILMN_1690703	0000070368	A	543	GCCCCAGACTTGTCGCACGGATGCAGAAAACTTAATGGAGGAGGCTGAGG	21	+	16901230-16901279	21q21.1b	Homo sapiens chromosome 21 open reading frame 34 (C21orf34), transcript variant 3, mRNA.				FLJ38295; C21orf35	FLJ38295; C21orf35
Homo sapiens	RefSeq	NM_004280.2	ILMN_176018	EEF1E1	NM_004280.3	NM_004280.3		9521	142383866	NM_004280.3	EEF1E1	NP_004271.1	ILMN_1725105	0000050301	S	457	CGCTGGTTTTGTCACATTCAGCATTATCCAGGCATCAGGCAACATCTGTC	6	-	8025167-8025216	6p24.3c	Homo sapiens eukaryotic translation elongation factor 1 epsilon 1 (EEF1E1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISS]; Any process that activates, maintains or increases the rate of the cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 43517] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	AIMP3; P18	P18
Homo sapiens	RefSeq	NM_144571.2	ILMN_18210	CNOT6L	NM_144571.2	NM_144571.2		246175	115583678	NM_144571.2	CNOT6L	NP_653172.2	ILMN_2083833	0004730619	S	4937	GGCCTGACATCTGGGAAAGGCTCAGATCCACCTACTGCTCCTTGCTCGTT	4	-	78857372-78857421	4q21.1c	Homo sapiens CCR4-NOT transcription complex, subunit 6-like (CNOT6L), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CCR4b	
Homo sapiens	RefSeq	NM_021814.3	ILMN_3518	ELOVL5	NM_021814.3	NM_021814.3		60481	52851443	NM_021814.3	ELOVL5	NP_068586.1	ILMN_2174369	0004210129	S	2467	CTCACACATTTGAGGCAGTGGTCAAACAGGTAAAGCCTATGATGTGTGTC	6	-	53240603-53240652	6p12.1d	Homo sapiens ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) (ELOVL5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]		HELO1; RP3-483K16.1; dJ483K16.1	HELO1; RP3-483K16.1; dJ483K16.1
Homo sapiens	RefSeq	NM_004544.2	ILMN_7463	NDUFA10	NM_004544.2	NM_004544.2		4705	33519462	NM_004544.2	NDUFA10	NP_004535.1	ILMN_2225698	0000510725	S	708	CCCGTTCCAGAGGTCCAGAGGCGGATTCAGAAGAAAGGAGATCCACATGA	2	-	240951105-240951113:240954156-240954196	2q37.3e	Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa (NDUFA10), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]	CI-42KD; MGC5103	CI-42KD; MGC5103
Homo sapiens	RefSeq	NM_004544.2	ILMN_7463	NDUFA10	NM_004544.2	NM_004544.2		4705	33519462	NM_004544.2	NDUFA10	NP_004535.1	ILMN_1791119	0006040291	S	1296	CCATCCTGTAGTATAGGTAATGGAGTTGGGGGAAGCAGCTTCCATTCTGG	2	-	240900337-240900386	2q37.3e	Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa (NDUFA10), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]	CI-42KD; MGC5103	CI-42KD; MGC5103
Homo sapiens	RefSeq	NM_012331.2	ILMN_23621	MSRA	NM_012331.2	NM_012331.2		4482	13259538	NM_012331.2	MSRA	NP_036463.1	ILMN_2228180	0006220722	S	1258	TCCTTTATCTGTGCTCTCTGCCCGCCAGTGCCTTACAATTTGCAAACGTG	8	+	10323581-10323630	8p23.1c	Homo sapiens methionine sulfoxide reductase A (MSRA), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10452521] [evidence TAS]; The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 6555] [pmid 10452521] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 10452521] [evidence TAS]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [pmid 10452521] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide [goid 16671] [evidence IEA]; Catalysis of the reactions: peptide-L-methionine + thioredoxin disulfide + H2O = peptide-L-methionine (S)-S-oxide + thioredoxin and L-methionine + thioredoxin disulfide + H2O = L-methionine (S)-S-oxide + thioredoxin [goid 8113] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	RefSeq	NM_175767.1	ILMN_28402	IL6ST	NM_002184.2	NM_002184.2		3572	28610146	NM_002184.2	IL6ST	NP_002175.2	ILMN_1746604	0003830048	A	2974	CCACAGACTGTACGGCAAGGCGGCTACATGCCTCAGTGAAGGACTAGTAG	5	-	55272895-55272944	5q11.2e	Homo sapiens interleukin 6 signal transducer (gp130, oncostatin M receptor) (IL6ST), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8999038] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2261637] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2261637] [evidence TAS]	The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2261637] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8999038] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that modulates the frequency, rate or extent of the Notch signaling pathway [goid 8593] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10954742] [evidence TAS]; Combining with interleukin-6 to initiate a change in cell activity [goid 4915] [pmid 8390097] [evidence TAS]; Combining with oncostatin-M to initiate a change in cell activity [goid 4924] [pmid 8999038] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11251120] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10982829] [evidence IPI]	GP130; CD130; IL6R-beta; CDw130; GP130-RAPS	GP130; CD130; IL6R-beta; CDw130; GP130-RAPS
Homo sapiens	RefSeq	NM_002184.2	ILMN_28402	IL6ST	NM_002184.2	NM_002184.2		3572	28610146	NM_002184.2	IL6ST	NP_002175.2	ILMN_1797861	0004260333	I	1262	TAGATCCATCCCATACTCAAGGCTACAGAACTGTACAACTCGTGTGGAAG	5	-	55290680-55290729	5q11.2e	Homo sapiens interleukin 6 signal transducer (gp130, oncostatin M receptor) (IL6ST), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8999038] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2261637] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2261637] [evidence TAS]	The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2261637] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8999038] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that modulates the frequency, rate or extent of the Notch signaling pathway [goid 8593] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10954742] [evidence TAS]; Combining with interleukin-6 to initiate a change in cell activity [goid 4915] [pmid 8390097] [evidence TAS]; Combining with oncostatin-M to initiate a change in cell activity [goid 4924] [pmid 8999038] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11251120] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10982829] [evidence IPI]	GP130; CD130; IL6R-beta; CDw130; GP130-RAPS	GP130; CD130; IL6R-beta; CDw130; GP130-RAPS
Homo sapiens	RefSeq	NM_173847.2	ILMN_4531	SPACA3	NM_173847.3	NM_173847.3		124912	142360775	NM_173847.3	SPACA3	NP_776246.1	ILMN_1775408	0001430709	S	709	GGCTGTGACTTCTAGGATGGACGGAACCATGCACAGCAGGCTGGGAAATG	17	+	28348895-28348909:28348910-28348944	17q11.2e	Homo sapiens sperm acrosome associated 3 (SPACA3), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; The membrane that surrounds the acrosomal lumen. The acrosome is a special type of lysosome in the head of a spermatozoon that contains acid hydrolases and is concerned with the breakdown of the outer membrane of the ovum during fertilization [goid 2080] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16150577] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [pmid 3470418] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [pmid 16150577] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 16150577] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [pmid 16150577] [evidence TAS]; The initial contact step made between the sperm plasma membrane and outer layer of the egg during fertilization [goid 35036] [evidence IEA]; The change in morphology and behavior of a monocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42117] [pmid 11591365] [evidence TAS]; Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [pmid 11591365] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [pmid 11591365] [evidence TAS]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [pmid 16150577] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [pmid 5154881] [evidence IDA]; Interacting selectively with any part of a bacterial cell [goid 8367] [pmid 16150577] [evidence TAS]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]; Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]	1700025M08Rik; MGC119058; SLLP1; LYZL3; LYC3; ALLP17	1700025M08Rik; MGC119058; SLLP1; LYZL3; LYC3; ALLP17
Homo sapiens	RefSeq	NM_002237.2	ILMN_28652	KCNG1	NM_002237.3	NM_002237.3		3755	148277549	NM_002237.3	KCNG1	NP_002228.2	ILMN_1673769	0001400427	I	2076	CCCGCCCACCCCAGCCCCTATGTGTGTTTCCCTCAATAAGGAGATGCCTT	20	-	49620287-49620336	20q13.13f	Homo sapiens potassium voltage-gated channel, subfamily G, member 1 (KCNG1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 9434767] [evidence NAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KCNG; KV6.1; MGC12878; K13; kH2	KCNG; KV6.1; MGC12878; K13; kH2
Homo sapiens	RefSeq	NM_172318.1	ILMN_28652	KCNG1	NM_002237.3	NM_002237.3		3755	148277549	NM_002237.3	KCNG1	NP_002228.2	ILMN_1670833	0001570241	A	804	TGCAGAAGATTGAGGAGTTCGCGGAGATGGTGGAGCGGGAGGAAGAGGAC	20	-	49626317-49626366	20q13.13f	Homo sapiens potassium voltage-gated channel, subfamily G, member 1 (KCNG1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 9434767] [evidence NAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KCNG; KV6.1; MGC12878; K13; kH2	KCNG; KV6.1; MGC12878; K13; kH2
Homo sapiens	RefSeq	NM_006286.1	ILMN_183128	TFDP2	NM_006286.1	NM_006286.1		7029	5454111	NM_006286.1	TFDP2	NP_006277.1	ILMN_1793671	0002340170	S	1789	ACTGAGGGCAGTCCTGTGGCTGAGGGGCACAGATTGAACTGCTGAACTAG	3	-	143153498-143153547	3q23c	Homo sapiens transcription factor Dp-2 (E2F dimerization partner 2) (TFDP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7784053] [evidence NAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 7784053] [evidence TAS]	Dp-2; DP2	Dp-2; DP2
Homo sapiens	RefSeq	NM_006286.1	ILMN_183128	TFDP2	NM_006286.1	NM_006286.1		7029	5454111	NM_006286.1	TFDP2	NP_006277.1	ILMN_2116639	0007200678	S	2051	GCCAGCACTGCCTTTGCCAGCATCCTAAATCTGGAGTTTTACCAAGAAGG	3	-	143153236-143153285	3q23c	Homo sapiens transcription factor Dp-2 (E2F dimerization partner 2) (TFDP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7784053] [evidence NAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 7784053] [evidence TAS]	Dp-2; DP2	Dp-2; DP2
Homo sapiens	RefSeq	XM_001719899.1	ILMN_350823	LOC442442	XM_001719899.1	XM_001719899.1		442442	169216899	XM_001719899.1	LOC442442	XP_001719951.1	ILMN_3294007	0005490746	M	122	CGTGCACTCAAAGGAGGAGACAGGCCATGCCTTTCAAGCACAGGCAGCTC	X	-	890665-890714	Xp22.33e,Yp11.32b	PREDICTED: Homo sapiens 60S ribosomal protein L14-like (LOC442442), mRNA.					
Homo sapiens	RefSeq	NM_031303.1	ILMN_21476	KATNAL2	NM_031303.1	NM_031303.1		83473	49065663	NM_031303.1	KATNAL2	NP_112593.1	ILMN_1656200	0005130372	I	47	CTGATGGAGCTTTCCTACCAGACCCTGAAATTCACGCATCAGGCGCGGGA	18	+	42780831-42780880	18q21.1b	Homo sapiens katanin p60 subunit A-like 2 (KATNAL2), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP [goid 8568] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	DKFZP667C165; MGC33211	DKFZP667C165; MGC33211
Homo sapiens	RefSeq	NM_000153.1	ILMN_28156	GALC	NM_000153.2	NM_000153.2		2581	83281449	NM_000153.2	GALC	NP_000144.2	ILMN_1799744	0003440491	S	3859	CACCCCAGAAGGTTCTCTTGTATACCTGCTCAGTCAGTTCCTTTCACTCC	14	-	88399624-88399673	14q31.3c	Homo sapiens galactosylceramidase (GALC), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 7601472] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6683] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: D-galactosyl-N-acylsphingosine + H2O = D-galactose + N-acylsphingosine [goid 4336] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Homo sapiens	RefSeq	NR_030376.1	ILMN_388187	MIR646	NR_030376.1	NR_030376.1		693231	262206219	NR_030376.1	MIR646		ILMN_3309574	0006280762	S	1	ATCAGGAGTCTGCCAGTGGAGTCAGCACACCTGCTTTTCACCTGTGATCC				20q13.33a	Homo sapiens microRNA 646 (MIR646), microRNA.					
Homo sapiens	RefSeq	NM_023071.1	ILMN_10985	SPATS2	NM_023071.1	NM_023071.1		65244	12751480	NM_023071.1	SPATS2	NP_075559.1	ILMN_2203463	0002030441	S	2584	CTGCTTGGCACCATAGCTTAACCTGCAGTTTCTTCAAAATGCCCAATGCC	12	+	48206867-48206916	12q13.12b-q13.12c	Homo sapiens spermatogenesis associated, serine-rich 2 (SPATS2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			SCR59; FLJ13117; Nbla00526; SPATA10	SCR59; FLJ13117; Nbla00526; SPATA10
Homo sapiens	Unigene	Hs.565402	ILMN_117880	HS.565402	Hs.565402		Hs.565402		24718176	CA388712			ILMN_1854924	0003780477	S	332	TGTCGATGTGGGTGTGTAGGGACTATTGGACCCCAGGGCAGGATGCAGTC					cs02a11.x1 Human Retinal pigment epithelium/choroid cDNA (Un-normalized, unamplified): cs Homo sapiens cDNA clone cs02a11 3, mRNA sequence					
Homo sapiens	RefSeq	XM_943664.1	ILMN_34510	LOC649355	XM_943664.1	XM_943664.1		649355	88981248	XM_943664.1	LOC649355	XP_948757.1	ILMN_1787594	0002570458	S	401	GAGCAAGATATGCCGACCTCCATCCTGCACCACTCCCACATGCTTCCCAT					PREDICTED: Homo sapiens hypothetical protein LOC649355 (LOC649355), mRNA.					
Homo sapiens	RefSeq	NM_024790.3	ILMN_169316	CSPP1	NM_001077204.1	NM_001077204.1		79848	116174788	NM_001077204.1	CSPP1	NP_001070672.1	ILMN_1812353	0006860709	S	3632	CACATAGGGGATGACGGATCAAACTCTGTAGCAACTGAGCCCTGGCTCCG	8	+	68107658-68107707	8q13.2a	Homo sapiens centrosome and spindle pole associated protein 1 (CSPP1), transcript variant 1, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]			CSPP; FLJ38886; FLJ22490	CSPP; FLJ22490
Homo sapiens	RefSeq	NM_022113.3	ILMN_5843	KIF13A	NM_022113.3	NM_022113.3		63971	21361721	NM_022113.3	KIF13A	NP_071396.3	ILMN_1796108	0007040274	S	5515	GACGGCAAAGATGAGCCCACAGAGAAGCAGGCTCACTTCCTGCACAGCTG	6	-	17872192-17872241	6p22.3e	Homo sapiens kinesin family member 13A (KIF13A), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ27232; bA500C11.2	FLJ27232; bA500C11.2
Homo sapiens	RefSeq	NM_005554.3	ILMN_20473	KRT6A	NM_005554.3	NM_005554.3		3853	126273584	NM_005554.3	KRT6A	NP_005545.1	ILMN_2219002	0003830681	S	2310	GTGTTGTGAACCCCCACCCAGGCAGTATCCATGAAAGCACAAGTGACTAG	12	-	52881048-52881097	12q13.13d	Homo sapiens keratin 6A (KRT6A), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [pmid 7545493] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 7543104] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 7543104] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 7543104] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	K6D; K6C; CK6C; K6A; KRT6C; KRT6D; CK6A; CK6D	K6A; CK6A
Homo sapiens	RefSeq	NM_000352.2	ILMN_181441	ABCC8	NM_000352.3	NM_000352.3		6833	118582254	NM_000352.3	ABCC8	NP_000343.2	ILMN_1767129	0004850086	S	4852	TTCGTCCGTGCAGACAAGTGACCTGCCAGAGCCCAAGTGCCATCCCACAT	11	-	17426720-17426769	11p15.1d	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 8 (ABCC8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 7716548] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 7502040] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 7502040] [evidence TAS]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [pmid 7502040] [evidence TAS]; Catalysis of the transfer of potassium ions (K+) from one side of a membrane to the other [goid 15079] [pmid 7502040] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	HRINS; SUR1; HHF1; ABC36; MRP8; HI; TNDM2; SUR; PHHI	SUR1; MRP8; HI; HRINS; ABC36; PHHI; SUR
Homo sapiens	RefSeq	NM_007046.1	ILMN_18157	EMILIN1	NM_007046.1	NM_007046.1		11117	5901943	NM_007046.1	EMILIN1	NP_008977.1	ILMN_1711439	0006760719	S	3235	GCCGCCCATGCAGACTTTTGGCCTGGCGCGATCCCCCAAGAACCCCTCCA	2	+	27162571-27162620	2p23.3a	Homo sapiens elastin microfibril interfacer 1 (EMILIN1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10358019] [evidence TAS]	A component of the extracellular matrix that enables the matrix to recoil after transient stretching [goid 30023] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	EMILIN-1; EMILIN; gp115; DKFZP586M121	EMILIN-1; EMILIN; gp115; DKFZP586M121
Homo sapiens	RefSeq	NM_178526.1	ILMN_5992	SLC25A42	NM_178526.1	NM_178526.1		284439	60460886	NM_178526.1	SLC25A42	NP_848621.1	ILMN_2222880	0000620692	S	2976	TCTGCGGTCACTCGCCTCCCTGCTGGTCACTGGTCTTGGTCTGGAGTTAT	19	+	19084553-19084602	19p13.11b	Homo sapiens solute carrier family 25, member 42 (SLC25A42), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC26694	MGC26694
Homo sapiens	RefSeq	XM_939071.1	ILMN_15638	TLR6	NM_006068.2	NM_006068.2		10333	20143970	NM_006068.2	TLR6	NP_006059.2	ILMN_1654560	0002600735	S	1887	CTACTTGGATCTGCCCTGGTATCTCAGGATGGTGTGCCAGTGGACCCAGA	4	-	38829224-38829273	4p14c	Homo sapiens toll-like receptor 6 (TLR6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16024789] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14625308] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10231569] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10231569] [evidence TAS]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 10231569] [evidence NAS]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [pmid 11686851] [evidence IC ]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 10426995] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 10231569] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of JUN kinase activity [goid 43507] [pmid 10231569] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [pmid 12077222] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [pmid 11431423] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD286	
Homo sapiens	RefSeq	NM_006068.2	ILMN_15638	TLR6	NM_006068.2	NM_006068.2		10333	20143970	NM_006068.2	TLR6	NP_006059.2	ILMN_1749287	0005340427	S	2583	ACAATGTTTCATCTGGGGAACTGAGCTAGGCGGTGAGGTTAGCCTGCCAG	4	-	38828528-38828577	4p14c	Homo sapiens toll-like receptor 6 (TLR6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16024789] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14625308] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10231569] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10231569] [evidence TAS]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 10231569] [evidence NAS]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [pmid 11686851] [evidence IC ]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 10426995] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 10231569] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of JUN kinase activity [goid 43507] [pmid 10231569] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [pmid 12077222] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [pmid 11431423] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD286	CD286
Homo sapiens	RefSeq	NM_206964.1	ILMN_23496	FAM3B	NM_206964.1	NM_206964.1		54097	46255031	NM_206964.1	FAM3B	NP_996847.1	ILMN_2355486	0006270743	A	406	CTGGACCGATGACAAAGTTTATTCAGAGTGCTGCTCCAAAATCCCTGCTC	21	+	41640816-41640865	21q22.3a	Homo sapiens family with sequence similarity 3, member B (FAM3B), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12160727] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [pmid 12160727] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 12160727] [evidence NAS]	PANDER; 2-21; PRED44; C21orf76; C21orf11; ORF9	2-21; C21orf76; C21orf11; ORF9; PANDER; PRED44
Homo sapiens	Unigene	Hs.395787	ILMN_89430	HS.395787	Hs.395787		Hs.395787		27834260	BX106738			ILMN_1847047	0004670491	S	618	ATATGGACAGGGTCAGCCGATTACAGCCTGAGGGGTAAATCCAGCCTGCC	7	-	150118432-150118481		BX106738 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998L0383, mRNA sequence					
Homo sapiens	RefSeq	NM_024408.2	ILMN_177954	NOTCH2	NM_024408.2	NM_024408.2		4853	24041034	NM_024408.2	NOTCH2	NP_077719.2	ILMN_2405297	0007210128	A	11153	AGCCATAGCTGGTGACAAACAGATGGTTGCTCAGGGACAAGGTGCCTTCC	1	-	120454398-120454447	1p12a	Homo sapiens Notch homolog 2 (Drosophila) (NOTCH2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1303260] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9244302] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 9244302] [evidence IDA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [pmid 9244302] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9244302] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12531696] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12531696] [evidence TAS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 11306509] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9244302] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12760378] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 11306509] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 12531696] [evidence IEP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 11306509] [evidence IDA]; The process by which an organism retains a population of stem cells, preventing the commitment of all stem cell progeny to a differentiated cell fate [goid 19827] [pmid 11306509] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 1303260] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction [goid 46579] [pmid 11306509] [evidence IDA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]	 [goid 3706] [pmid 9244302] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9244302] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12531696] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9244302] [evidence NAS]	hN2; AGS2	hN2; AGS2
Homo sapiens	RefSeq	NM_018117.10	ILMN_22609	BRWD2	NM_018117.10	NM_018117.10		55717	22547233	NM_018117.10	BRWD2	NP_060587.8	ILMN_2086222	0005560136	S	4478	AGGCTCAGAGGACCATAGGAGGTTTTAAGATTTATGTTTAGTCCGATAGG	10	+	122639507-122639511:122640218-122640262	10q26.12b	Homo sapiens bromodomain and WD repeat domain containing 2 (BRWD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	FLJ42531; DR11; DKFZp434L1715; WDR15; WDR11	FLJ42531; DR11; DKFZp434L1715; WDR15; WDR11
Homo sapiens	RefSeq	NM_018117.10	ILMN_22609	BRWD2	NM_018117.10	NM_018117.10		55717	22547233	NM_018117.10	BRWD2	NP_060587.8	ILMN_1662896	0002140139	S	3988	CAGTCCAGGATGAAGAGGAGTACAGGGTCCTGTGAGCTGTTTGACCACTG	10	+	122635423-122635440:122636191-122636222	10q26.12b	Homo sapiens bromodomain and WD repeat domain containing 2 (BRWD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	FLJ42531; DR11; DKFZp434L1715; WDR15; WDR11	FLJ42531; DR11; DKFZp434L1715; WDR15; WDR11
Homo sapiens	RefSeq	NM_199135.1	ILMN_8506	FOXD4L2	NM_199135.1	NM_199135.1		286380	40353244	NM_199135.1	FOXD4L2	NP_954586.1	ILMN_2188390	0005310376	S	1326	GTCGGCGCTGCTGAGGTATCAGGCAGTGGCAGAGGGCTCTAGGCTGACAT	9	+	70108928-70108941:70108942-70108977	9q13a	Homo sapiens FOXD4-like 2 (FOXD4L2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC119257	MGC119257
Homo sapiens	RefSeq	XM_940609.1	ILMN_33018	FLJ25076	XM_940609.2	XM_940609.2		134111	113416989	XM_940609.2	FLJ25076	XP_945702.2	ILMN_1804175	0004760372	A	3912	CCTGAGCCTTGGTTTCCTCAGCTGTGAGCTCCTACCAGGTCAGTGTGGGA				5p15.31c	PREDICTED: Homo sapiens similar to CG4502-PA (FLJ25076), mRNA.					
Homo sapiens	RefSeq	XM_939640.1	ILMN_175106	THRAP5	XM_001130102.1	XM_001130102.1		10025	113428416	XM_001130102.1	THRAP5	XP_001130102.1	ILMN_1719185	0002360338	I	2924	ACGACCTCGATTTGGTGCCGGGAGCCTGTGTCCTCTTGGCCTGTCTTTAA				19p13.3i	PREDICTED: Homo sapiens thyroid hormone receptor associated protein 5 (THRAP5), mRNA.					
Homo sapiens	RefSeq	NM_001032291.1	ILMN_9290	PSRC1	NM_001032291.1	NM_001032291.1		84722	73858560	NM_001032291.1	PSRC1	NP_001027462.1	ILMN_2315964	0001510152	A	1323	TCTCTGGGTTGAAAGAAGATTAGGGGAAAAGAGGTCACCTTCCAGCAGTG	1	-	109822526-109822575	1p13.3b	Homo sapiens proline/serine-rich coiled-coil 1 (PSRC1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 12427559] [evidence ISS]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 12427559] [evidence ISS]	A process that results in a parallel arrangement of microtubules [goid 1578] [pmid 12427559] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 12427559] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 12427559] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [pmid 12427559] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [pmid 12427559] [evidence ISS]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12427559] [evidence ISS]	RP11-297O4.2; DDA3; MGC1780; FP3214	RP11-297O4.2; DDA3; MGC1780; FP3214
Homo sapiens	RefSeq	XM_932020.1	ILMN_42202	LOC653424	XM_932020.1	XM_932020.1		653424	89057825	XM_932020.1	LOC653424	XP_937113.1	ILMN_1664083	0000940091	S	77	CGCTGCAACACAAACCAGCACCTGAACAAGCTTGGTCAGCCAGCGGTACA	20	+	18216746-18216795		PREDICTED: Homo sapiens similar to zinc finger protein 133 (clone pHZ-13) (LOC653424), mRNA.					
Homo sapiens	RefSeq	NM_144708.2	ILMN_176429	ANKAR	NM_144708.2	NM_144708.2		150709	91206449	NM_144708.2	ANKAR	NP_653309.2	ILMN_2112834	0001430563	S	3335	CAGTTGAAACTGAGAAGGCAATGGCAGCATTTCAGATTGTTGTACTGGCT	2	+	190310778-190310812:190311536-190311550	2q32.2a	Homo sapiens ankyrin and armadillo repeat containing (ANKAR), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ25415	FLJ25415
Homo sapiens	RefSeq	NM_144708.2	ILMN_176429	ANKAR	NM_144708.2	NM_144708.2		150709	91206449	NM_144708.2	ANKAR	NP_653309.2	ILMN_2112829	0000110707	S	4040	ACCAACTTGGGAAACATGTCCAGAAAGCCAACCCAGAGCCTGCAGAAGGC	2	+	190319546-190319595	2q32.2a	Homo sapiens ankyrin and armadillo repeat containing (ANKAR), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ25415	FLJ25415
Homo sapiens	RefSeq	XM_926880.1	ILMN_46317	LOC642863	XM_926880.1	XM_926880.1		642863	88986230	XM_926880.1	LOC642863	XP_931973.1	ILMN_1807362	0002680259	S	1	TGCCCTTTCCTCCCAATATGAAAACCAGCTAAGAACACACATGAAGAAAC	5	-	169305983-169306032		PREDICTED: Homo sapiens hypothetical protein LOC642863 (LOC642863), mRNA.					
Homo sapiens	RefSeq	NM_018950.1	ILMN_306829	HLA-F	NM_001098479.1	NM_001098479.1		3134	149158701	NM_001098479.1	HLA-F	NP_001091949.1	ILMN_1762861	0005220070	S	641	TATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGTTGCT	6	+	29692132-29692181	6p22.1a	Homo sapiens major histocompatibility complex, class I, F (HLA-F), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 1688605] [evidence TAS]	HLA-5.4; HLAF; CDA12; HLA-CDA12	HLA-5.4; HLAF; HLA-CDA12
Homo sapiens	RefSeq	XM_939925.1	ILMN_41340	LOC648453	XM_939925.1	XM_939925.1		648453	89047445	XM_939925.1	LOC648453	XP_945018.1	ILMN_1752150	0002850717	S	2027	CTACATTGACTTCGTGCAATCCCTCTCATTATGTATTGGTGAACTCAGAG					PREDICTED: Homo sapiens hypothetical protein LOC648453 (LOC648453), mRNA.					
Homo sapiens	Unigene	Hs.577758	ILMN_129939	HS.577758	Hs.577758		Hs.577758		10810832	BF056936			ILMN_1900671	0005220561	S	425	GCCAAACTCCCCAGGCCACAACCAGGCTACACCTCCTGAAAGACAACTCG					7k12b05.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:3444033 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004552.1	ILMN_6762	NDUFS5	NM_004552.1	NM_004552.1		4725	4758789	NM_004552.1	NDUFS5	NP_004543.1	ILMN_1776104	0006980398	S	127	CAATCCAGAGTGGTGAACAGCCCTACAAGATGGCTGGTCGATGCCATGCT	1	+	39267039-39267088	1p34.3a	Homo sapiens NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase) (NDUFS5), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16826196] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 10070614] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 10070614] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form mitochondrial respiratory chain complex I [goid 32981] [pmid 11112787] [evidence IMP]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 10070614] [evidence NAS]		
Homo sapiens	RefSeq	NM_174970.1	ILMN_13266	ST3GAL3	NM_174970.1	NM_174970.1		6487	28373083	NM_174970.1	ST3GAL3	NP_777630.1	ILMN_2350315	0000770382	A	1123	TACAGGATGGTGGGCAGGATCTCAAGCCAGCCCCCTCCAGCTCATGACAC	1	+	44168987-44169036	1p34.1f	Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (ST3GAL3), transcript variant 8, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein [goid 8118] [pmid 8333853] [evidence TAS]	ST3Gal III; ST3N; ST3GalIII; ST3GALII; SIAT6	ST3Gal III; ST3N; ST3GalIII; ST3GALII; SIAT6
Homo sapiens	RefSeq	XM_001133830.1	ILMN_162466	LOC729519	XM_001133830.1	XM_001133830.1		729519	113426179	XM_001133830.1	LOC729519	XP_001133830.1	ILMN_3223953	0001050138	A	1197	TGATGGGGAGGGTTGTGGGGGGATGGTGGGAGCTGACAGTGCCAGGAGAT	16	-	86684754-86684803	16q24.2b	PREDICTED: Homo sapiens hypothetical LOC729519 (LOC729519), mRNA.					
Homo sapiens	RefSeq	XM_001133830.1	ILMN_162466	LOC729519	XM_001133830.1	XM_001133830.1		729519	113426179	XM_001133830.1	LOC729519	XP_001133830.1	ILMN_3300516	0002900673	M	1135	CTTGTAGGAGATCGCGACCCTCCAGGGCTACGAGGCCGTGCCCGAGCACT	16	-	86684816-86684865	16q24.2b	PREDICTED: Homo sapiens hypothetical LOC729519 (LOC729519), mRNA.					
Homo sapiens	RefSeq	XM_931262.1	ILMN_39317	LOC642711	XM_931262.1	XM_931262.1		642711	89038174	XM_931262.1	LOC642711	XP_936355.1	ILMN_1777248	0004900382	I	1138	AAAGAAAAATGATTATTACTTCAATCCCATCATCTAGAGATGCTTAGTGT	15	-	30606083-30606132		PREDICTED: Homo sapiens similar to junction-mediating and regulatory protein, transcript variant 2 (LOC642711), mRNA.					
Homo sapiens	RefSeq	NM_004946.1	ILMN_2349	DOCK2	NM_004946.1	NM_004946.1		1794	31377467	NM_004946.1	DOCK2	NP_004937.1	ILMN_1799725	0000010747	S	5780	GAATGCCTTCTCCCAGTGTGCTCTCCCCAACATCCTAGGCACAGCTTTCA	5	+	169442689-169442738	5q35.1b-q35.1c	Homo sapiens dedicator of cytokinesis 2 (DOCK2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14737186] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The clustering and aggregation of membrane rafts at a single cellular pole during activation of particular cell types, such as lymphocytes [goid 1766] [evidence IEA]; The directed orientation of T cell signaling molecules and associated membrane rafts towards a chemokine gradient or a contact point with antigen presenting cell [goid 1768] [evidence IEA]; The formation of an area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and target cell, which facilitates activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1771] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 12176041] [evidence TAS]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IEA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IEA]; The expansion of an alpha-beta T cell population by cell division [goid 46633] [evidence IEA]; The directed movement of a lymphocyte in response to an external stimulus [goid 48247] [pmid 11518968] [evidence ISS]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12134158] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 30676] [pmid 10559471] [evidence IDA]; Interacting selectively with a T cell receptor, the antigen-recognizing receptor on the surface of T cells [goid 42608] [pmid 12176041] [evidence IDA]	FLJ46592; KIAA0209	FLJ46592; KIAA0209
Homo sapiens	RefSeq	XM_939228.1	ILMN_32008	LOC650146	XM_939228.1	XM_939228.1		650146	89028924	XM_939228.1	LOC650146	XP_944321.1	ILMN_1661261	0002360605	S	61	GCAGAGACAACTCACAACATCACCAATGCCTTTGGCCCAGGAACTGCTAA					PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC650146), mRNA.					
Homo sapiens	RefSeq	NR_002806.2	ILMN_365957	FAM13AOS	NR_002806.2	NR_002806.2		285512	196259793	NR_002806.2	FAM13AOS		ILMN_3245879	0006860280	S	2749	GGGGCTTCACTCTCCTCAGACACGAAGTCATGGAACCAGAGCTTATCTCC	4	+	89650793-89650842	4q22.1b-q22.1c	Homo sapiens FAM13A opposite strand (non-protein coding) (FAM13AOS), non-coding RNA.					
Homo sapiens	RefSeq	XM_927555.1	ILMN_41197	LOC653232	XM_944104.2	XM_944104.2		653232	113417930	XM_944104.2	LOC653232	XP_949197.1	ILMN_1698940	0004780341	A	310	TTTGCTCGAAGCCTTCAGTCCGTTGCAGAGGAGCGAGTTGGACGCCACTG				6p24.1b	PREDICTED: Homo sapiens hypothetical LOC653232, transcript variant 4 (LOC653232), mRNA.					
Homo sapiens	RefSeq	XM_944100.1	ILMN_41197	LOC653232	XM_944104.2	XM_944104.2		653232	113417930	XM_944104.2	LOC653232	XP_949197.1	ILMN_1716014	0005050541	A	370	AGGGTCCTGAATTCTTACTGGGTTGGTGAAGATTCCACATACAAATTTTT				6p24.1b	PREDICTED: Homo sapiens hypothetical LOC653232, transcript variant 4 (LOC653232), mRNA.					
Homo sapiens	RefSeq	NM_005892.3	ILMN_4113	FMNL1	NM_005892.3	NM_005892.3		752	33356147	NM_005892.3	FMNL1	NP_005883.2	ILMN_1782748	0000240121	S	3620	TATTTCTGCAGGTGGATTCTGCAGGGGTGTGGGGCCGTGGACAGGCTGAG	17	+	40680125-40680174	17q21.31d	Homo sapiens formin-like 1 (FMNL1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	MGC21878; FMNL; C17orf1B; C17orf1; FHOD4; MGC133052; MGC1894; KW-13	MGC21878; FMNL; C17orf1B; C17orf1; FHOD4; MGC133052; MGC1894; KW-13
Homo sapiens	RefSeq	NM_001610.1	ILMN_3044	ACP2	NM_001610.1	NM_001610.1		53	4557009	NM_001610.1	ACP2	NP_001601.1	ILMN_2104830	0002480025	S	1866	GTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTGGGAGGG	11	-	47217622-47217671	11p11.2b	Homo sapiens acid phosphatase 2, lysosomal (ACP2), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 2776754] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]	Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [pmid 3191910] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_018659.2	ILMN_7848	CYTL1	NM_018659.2	NM_018659.2		54360	49472832	NM_018659.2	CYTL1	NP_061129.1	ILMN_2201596	0000670731	S	480	GTCAGCTACCCAGACTTAATGGGCCAGAGCCATGACCCTCACAGGTCTTG	4	-	5067685-5067734	4p16.2a	Homo sapiens cytokine-like 1 (CYTL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10857752] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10857752] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10857752] [evidence TAS]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are chondroitin sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues; the repeat units consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 50650] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 10857752] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	C4orf4; C17	C4orf4; C17
Homo sapiens	RefSeq	XM_942280.1	ILMN_45375	LOC652682	XM_942280.1	XM_942280.1		652682	89076946	XM_942280.1	LOC652682	XP_947373.1	ILMN_1714191	0004850102	S	132	GGCAGTTTCCTTGCTTTCCAGCTTGTTAGGAGCCTTCAGGACATCCCTGC					PREDICTED: Homo sapiens similar to Y46G5A.1a (LOC652682), mRNA.					
Homo sapiens	RefSeq	NM_001128619.1	ILMN_365931	LUZP6	NM_001128619.1	NM_001128619.1		767558	190886450	NM_001128619.1	LUZP6	NP_001122091.1	ILMN_3245756	0002360736	S	1	ACTAGTGGCGTTCGCGCCGCGGACCCAGAGAGAGGCGTTCCGCGGAGGAG	7	-	135662154-135662203		Homo sapiens leucine zipper protein 6 (LUZP6), mRNA.					
Homo sapiens	RefSeq	NM_001017397.1	ILMN_7541	TRIM36	NM_001017397.1	NM_001017397.1		55521	62865609	NM_001017397.1	TRIM36	NP_001017397.1	ILMN_2361737	0005220746	A	471	CCCGCGTCGGTCCTCCAGAGTTTGTGAAGGGGTGTAAACATGTCGGAGTC	5	-	114543622-114543633:114543634-114543671	5q22.3b	Homo sapiens tripartite motif-containing 36 (TRIM36), transcript variant 2, mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HAPRIN; RNF98; RBCC728	HAPRIN; RBCC728; RNF98
Homo sapiens	RefSeq	NM_001017397.1	ILMN_7541	TRIM36	NM_001017397.1	NM_001017397.1		55521	62865609	NM_001017397.1	TRIM36	NP_001017397.1	ILMN_1674580	0006650326	I	615	GGGAAGACGACGGAACTTGCCACAGCGACAGACTTCTCCCAAACAGGAAA	5	-	114534726-114534775	5q22.3b	Homo sapiens tripartite motif-containing 36 (TRIM36), transcript variant 2, mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HAPRIN; RNF98; RBCC728	HAPRIN; RBCC728; RNF98
Homo sapiens	RefSeq	NM_001002847.1	ILMN_179225	CHTF8	NM_001040144.1	NM_001040144.1		54921	94421442	NM_001040144.1	CHTF8	NP_001035234.1	ILMN_1779780	0003370072	A	2703	CTGATGTGGATGGGAATATGGGAATTAGGGTGGGGGTGGGGGATGAAGGG	16	-	69152016-69152065	16q22.1d	Homo sapiens CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) (CHTF8), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ20400; DERPC	FLJ20400; CTF8
Homo sapiens	RefSeq	NM_138612.1	ILMN_179225	CHTF8	NM_001040144.1	NM_001040144.1		54921	94421442	NM_001040144.1	CHTF8	NP_001035234.1	ILMN_1684341	0002640072	I	2391	ATGGTGAGCAGGGGACTACATGTGAACTGGGACCTGCAGGCCAATGTATC	16	-	69152328-69152377	16q22.1d	Homo sapiens CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) (CHTF8), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ20400; DERPC	
Homo sapiens	RefSeq	NM_001040144.1	ILMN_179225	CHTF8	NM_001040144.1	NM_001040144.1		54921	94421442	NM_001040144.1	CHTF8	NP_001035234.1	ILMN_2366998	0002030162	A	151	ATCGAGGCTCGCTACAGCACTGGATTAGCTGGAAACCTCCTGGGAGACCT	16	-	69154971-69155020	16q22.1d	Homo sapiens CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) (CHTF8), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ20400; DERPC	FLJ20400; DERPC
Homo sapiens	RefSeq	NM_001005484.1	ILMN_178117	OR4F5	NM_001005484.1	NM_001005484.1		79501	53828739	NM_001005484.1	OR4F5	NP_001005484.1	ILMN_2200738	0004670735	S	559	AGGCTAGATATTATGGTCATTGCTAACAGTGGTGTGCTCACTGTGTGTTC	1	+	59512-59561	1p36.33b	Homo sapiens olfactory receptor, family 4, subfamily F, member 5 (OR4F5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_001005484.1	ILMN_178117	OR4F5	NM_001005484.1	NM_001005484.1		79501	53828739	NM_001005484.1	OR4F5	NP_001005484.1	ILMN_1776601	0003610128	S	386	TGTGTGGCAACGCATGTGTCGGCATTATGGCTGTCACATGGGGAATTGGC	1	+	59339-59388	1p36.33b	Homo sapiens olfactory receptor, family 4, subfamily F, member 5 (OR4F5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_018685.2	ILMN_20921	ANLN	NM_018685.2	NM_018685.2		54443	31657093	NM_018685.2	ANLN	NP_061155.2	ILMN_1739645	0006450669	S	4131	TCAGAAAAGTGATGTGGACATAGGAGGCAATGTGTGAGACTTGGGGGTTC	7	+	36446055-36446104	7p14.2a	Homo sapiens anillin, actin binding protein (ANLN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [pmid 10931866] [evidence IDA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 10931866] [evidence IDA]; The aggregation, arrangement and bonding together of septins and associated proteins to form an organized structure resembling a ring at the cell cortex [goid 921] [pmid 10931866] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [pmid 10931866] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 10931866] [evidence IDA]	DKFZp779A055; Scraps; scra; ANILLIN	DKFZp779A055; Scraps; scra; ANILLIN
Homo sapiens	RefSeq	XM_001721918.1	ILMN_345400	LOC100131017	XM_001721918.1	XM_001721918.1		100131017	169172140	XM_001721918.1	LOC100131017	XP_001721970.1	ILMN_3211199	0006840239	A	4559	CTGAGGTTGGTCGAAGGATCTTTCCCCACATCCCATAATCAGGGCCCTAG				7p22.1a	PREDICTED: Homo sapiens similar to zinc finger protein 316 (LOC100131017), mRNA.					
Homo sapiens	RefSeq	NM_032579.1	ILMN_171561	RETNLB	NM_032579.1	NM_032579.1		84666	14211896	NM_032579.1	RETNLB	NP_115968.1	ILMN_1787379	0005270553	S	604	CCAGCTTGGGGCTCCCCTATCCAGAAAATGTTGTCAGTGTCCCAGTGGTG	3	-	109957095-109957144	3q13.13a	Homo sapiens resistin like beta (RETNLB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11209052] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	RELMb; RELMbeta; HXCP2; FIZZ2; RELM-beta; XCP2; FIZZ1	RELMb; RELMbeta; HXCP2; FIZZ2; RELM-beta; XCP2; FIZZ1
Homo sapiens	RefSeq	NM_001004453.1	ILMN_161869	OR1L6	NM_001004453.1	NM_001004453.1		392390	52317169	NM_001004453.1	OR1L6	NP_001004453.1	ILMN_1762090	0005420215	S	879	TTATGTCTATTTTAGGCCCCTGTCCATGTACTCAGTGGTTAGGGACCGGG	9	+	124552718-124552767	9q33.2b	Homo sapiens olfactory receptor, family 1, subfamily L, member 6 (OR1L6), mRNA.				OR1L7; HG16; OR9-30	OR1L7; HG16; OR9-30
Homo sapiens	RefSeq	Hs.391584	ILMN_182122	UVRAG	NM_003369.3	NM_003369.3		7405	111160877	NM_003369.3	UVRAG	NP_003360.2	ILMN_1909466	0000670095	S	4669	AGTTAGTATGGCCTCTGTTTAAAGTGGCTGGGGCCAAAATAAGGGATGAG	11	+	75532075-75532124	11q13.5a-q13.5b	Homo sapiens UV radiation resistance associated gene (UVRAG), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9169138] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9169138] [evidence TAS]		p63; DHTX	
Homo sapiens	RefSeq	NM_003369.2	ILMN_182122	UVRAG	NM_003369.3	NM_003369.3		7405	111160877	NM_003369.3	UVRAG	NP_003360.2	ILMN_1761069	0001570220	S	3139	CCCCTGTGGGGGCCAAAGTTTTTATGTGGGCAGATGCTGTGGTCAGGAAC	11	+	75530545-75530594	11q13.5a-q13.5b	Homo sapiens UV radiation resistance associated gene (UVRAG), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9169138] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9169138] [evidence TAS]		p63; DHTX	
Homo sapiens	RefSeq	XM_930248.1	ILMN_35825	LOC647210	XM_930248.1	XM_930248.1		647210	89040318	XM_930248.1	LOC647210	XP_935341.1	ILMN_1727977	0007330059	S	187	AGGCATGTTTTACGACAGAAGAAGCCTTAAGACACCATGGTTTCAGGATG	16	-	33274307-33274311:33279091-33279132:33279133-33279135		PREDICTED: Homo sapiens similar to protein kinase CHK2 isoform b (LOC647210), mRNA.					
Homo sapiens	RefSeq	NM_002970.1	ILMN_12497	SAT1	NM_002970.1	NM_002970.1		6303	4506788	NM_002970.1	SAT1	NP_002961.1	ILMN_1753342	0005490431	S	666	GGCAACAGAGGAGTGAGGAGTGCTGCTGTAGATGACAACCTCCATTCTAT	X	+	23713879-23713894:23713895-23713928	Xp22.11a	Homo sapiens spermidine/spermine N1-acetyltransferase 1 (SAT1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: acetyl-CoA + an alkane-alpha,omega-diamine = CoA + an N-acetyldiamine [goid 4145] [pmid 1985966] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KFSD; SSAT-1; DC21; SSAT; SAT	KFSD; SSAT-1; DC21; SSAT; SAT
Homo sapiens	RefSeq	NM_005515.3	ILMN_181692	MNX1	NM_005515.3	NM_005515.3		3110	89257347	NM_005515.3	MNX1	NP_005506.3	ILMN_3240365	0004280333	S	1975	GGGTTTATGCTTACGTCTCTGGGGTCGGGGGGATTATGTCACGAGCGTTC	7	-	156797698-156797747	7q36.3c	Homo sapiens motor neuron and pancreas homeobox 1 (MNX1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9843207] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [pmid 7914194] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9843207] [evidence TAS]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7914194] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOXHB9; HB9; SCRA1	HB9; SCRA1; HOXHB9
Homo sapiens	RefSeq	XM_942108.1	ILMN_137955	LOC652587	XM_942108.1	XM_942108.1		652587	88955211	XM_942108.1	LOC652587	XP_947201.1	ILMN_1666963	0006580523	S	61	TTATTTTAAAATATCTGGCTCGATCAACTTTGCCAGTTTTAGAGCCAGTC					PREDICTED: Homo sapiens hypothetical protein LOC652587 (LOC652587), mRNA.					
Homo sapiens	RefSeq	XM_001719366.1	ILMN_336916	LOC727748	XM_001719366.1	XM_001719366.1		727748	169172685	XM_001719366.1	LOC727748	XP_001719418.1	ILMN_3237353	0001030390	S	460	CTTCTTCATCACCGACGGGCGCTCGCGGCGTAAGGCTTCCAATGCCGGCG	8	+	4819-4868		PREDICTED: Homo sapiens similar to scratch homolog 1, zinc finger protein (Drosophila) (LOC727748), mRNA.					
Homo sapiens	RefSeq	XM_943319.1	ILMN_39012	LOC648424	XM_943319.1	XM_943319.1		648424	89060988	XM_943319.1	LOC648424	XP_948412.1	ILMN_1673489	0000110600	S	73	CCCGCGCCAATGGCCACGGAACTCAGCACTGGCAGTCGGCCCTCCTCACA					PREDICTED: Homo sapiens hypothetical LOC648424 (LOC648424), mRNA.					
Homo sapiens	RefSeq	NM_178477.2	ILMN_5162	C20ORF179	NM_178477.2	NM_178477.2		140836	62632762	NM_178477.2	C20orf179	NP_848572.2	ILMN_2293451	0005670373	I	212	ACGTCCTTCAGAGCAAGAAGGCGTACACGAGGAGCTCGACTCTGTAGAAA	20	+	17651476-17651523:17653668-17653669	20p12.1a	Homo sapiens chromosome 20 open reading frame 179 (C20orf179), transcript variant 1, mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC72082; BAF-Like; MGC62093; BAF-L	MGC72082; BAF-Like; MGC62093; BAF-L
Homo sapiens	RefSeq	XM_372954.1	ILMN_22782	LOC391429	XM_372954.1	XM_372954.1		391429	41118774	XM_372954.1	LOC391429	XP_372954.1	ILMN_1764308	0004590592	A	312	TGGCACAGAGCATACAAAAGATGGTATGGGGGTTGCTGAGGGGACTCTGG	2	+	115139065-115139114	2q14.1b	PREDICTED: Homo sapiens hypothetical LOC391429 (LOC391429), mRNA.					
Homo sapiens	RefSeq	NM_004054.2	ILMN_5675	C3AR1	NM_004054.2	NM_004054.2		719	21314629	NM_004054.2	C3AR1	NP_004045.1	ILMN_1787529	0000840068	S	1750	GAATCGGAATCTCTGGGGGTTGGGACCCAGCAAGGGCACTTAACAAACCC	12	-	8211074-8211123	12p13.31c	Homo sapiens complement component 3a receptor 1 (C3AR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8702752] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8702752] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 8765043] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8898085] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10571060] [evidence IGI]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8765043] [evidence TAS]	Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [pmid 8765043] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the C3a product of the complement cascade to initiate a change in cell activity [goid 4876] [pmid 8765043] [evidence TAS]; Combining with anaphylatoxin C3a to initiate a change in cell activity [goid 4943] [pmid 8702752] [evidence TAS]	HNFAG09; C3AR; AZ3B	HNFAG09; C3AR; AZ3B
Homo sapiens	Unigene	Hs.574769	ILMN_126950	HS.574769	Hs.574769		Hs.574769		80798677	DA433643			ILMN_1876203	0003130008	S	380	CCACACGAACCCTATTACATCACCAAGCCCTCACCGTTTCCAGCACCCAG	2	+	9162119-9162165:9162576-9162578		DA433643 CTONG1 Homo sapiens cDNA clone CTONG1000417 5, mRNA sequence					
Homo sapiens	RefSeq	NM_005047.2	ILMN_166178	PSMD5	NM_005047.2	NM_005047.2		5711	25777613	NM_005047.2	PSMD5	NP_005038.1	ILMN_1720926	0003060750	S	3205	ACTGTCTATTCCCTCTTTTCCCCAGCCTCTGGCAACCACCATTCTGCTTC	9	-	123578463-123578512	9q33.2a	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 (PSMD5), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	S5B; MGC23145; KIAA0072	S5B; MGC23145; KIAA0072
Homo sapiens	RefSeq	NM_004836.3	ILMN_26832	EIF2AK3	NM_004836.4	NM_004836.4		9451	134304837	NM_004836.4	EIF2AK3	NP_004827.4	ILMN_1724984	0000840709	S	4008	CCCTGGCGGGTAAATTAGGAATCTGCACTATTTTGGAGGACAAGTAGCAC	2	-	88856749-88856798	2p11.2c	Homo sapiens eukaryotic translation initiation factor 2-alpha kinase 3 (EIF2AK3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11907036] [evidence IC ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12086964] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11907036] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence IEA]; The process of apoptosis in cells infected with a virus [goid 6926] [evidence IEA]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [pmid 10677345] [evidence IDA]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [pmid 11907036] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [pmid 12086964] [evidence TAS]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [evidence IEA]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IEA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [pmid 10677345] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [pmid 11907036] [evidence IDA]; The process whose specific outcome is the progression of the endocrine pancreas over time, from its formation to the mature structure. The endocrine pancreas is made up of islet cells that produce insulin, glucagon and somatostatin [goid 31018] [pmid 12086964] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation of a myelin sheath around nerve axons [goid 31642] [evidence IEA]; Any process that stops, prevents or reduces the rate of translation initiation as a result of a stimulus indicating the organism is under stress [goid 32057] [pmid 12086964] [evidence TAS]; Any process that stops, prevents or reduces the rate of translation initiation as a result of a stimulus indicating the organism is under stress [goid 32057] [pmid 10677345] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of protein binding [goid 32092] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 10026192] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 12086964] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 11907036] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 11907036] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 (EIF2) [goid 4694] [pmid 12086964] [evidence IMP]; Catalysis of the phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 (EIF2) [goid 4694] [pmid 10026192] [evidence IDA]; Catalysis of the phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 (EIF2) [goid 4694] [pmid 10677345] [evidence IDA]; Catalysis of the phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 (EIF2) [goid 4694] [pmid 11907036] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11907036] [evidence IPI]	PERK; PEK; WRS; DKFZp781H1925	PERK; PEK; WRS; DKFZp781H1925
Homo sapiens	RefSeq	XR_017503.2	ILMN_183330	LOC442727	XR_017503.2	XR_017503.2		442727	169171154	XR_017503.2	LOC442727		ILMN_3291472	0004640022	M	229	GTGACGACGAGGAAGCTGAGTTGGCTACAGGCAAGCGGGCAGCTGAAGAT	7	-	137739530-137739579	7q34a	PREDICTED: Homo sapiens misc_RNA (LOC442727), miscRNA.					
Homo sapiens	RefSeq	NM_015063.1	ILMN_17392	SLC8A2	NM_015063.1	NM_015063.1		6543	57163986	NM_015063.1	SLC8A2	NP_055878.1	ILMN_1698846	0002320369	S	4121	CTGCTTCCCACAGGTTTTCAGCATTCTATCGTCCTGTTGTGCTCAGCCCC	19	-	52623846-52623895	19q13.32c	Homo sapiens solute carrier family 8 (sodium/calcium exchanger), member 2 (SLC8A2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NCX2	NCX2
Homo sapiens	RefSeq	NM_000210.1	ILMN_26997	ITGA6	NM_000210.1	NM_000210.1		3655	4557674	NM_000210.1	ITGA6	NP_000201.1	ILMN_1687974	0005390201	S	5289	GATGAATGTCGGAAAAGGGTGTTGGGAGGGTGGTCAACAAAGAAACAAAG	2	+	173078962-173079011	2q31.1d	Homo sapiens integrin, alpha 6 (ITGA6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [pmid 9185503] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD49f	CD49f
Homo sapiens	RefSeq	NM_001099667.1	ILMN_308522	ARMS2	NM_001099667.1	NM_001099667.1		387715	153792796	NM_001099667.1	ARMS2	NP_001093137.1	ILMN_3249571	0004200324	S	331	GGTTCCAGCAGCCTCAGCACCACCTGACACTGTCTATCATCCACACTGCA	10	+	124204499-124204530:124206413-124206430	10q26.13b	Homo sapiens age-related maculopathy susceptibility 2 (ARMS2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			ARMD8	ARMD8
Homo sapiens	RefSeq	XM_496112.2	ILMN_45932	LOC653650	XM_496112.2	XM_496112.2		653650	89039627	XM_496112.2	LOC653650	XP_496112.2	ILMN_1683903	0004900601	I	2282	TGCGGCCAAGATGCTCCAGAACACTGCCTGTCTTTCCACAGAAACCCCCG	16	-	2606193-2606242	16p13.3d	PREDICTED: Homo sapiens similar to 3-phosphoinositide dependent protein kinase 1 (hPDK1), transcript variant 1 (LOC653650), mRNA.					
Homo sapiens	RefSeq	NM_005164.2	ILMN_168880	ABCD2	NM_005164.2	NM_005164.2		225	21536379	NM_005164.2	ABCD2	NP_005155.1	ILMN_2198897	0004850541	S	3809	GGAAAGATCGAGAAATCAAATGAAGTTCTCCTGACTCTCTGGTTTAGTGC	12	-	38232898-38232947	12q12b	Homo sapiens ATP-binding cassette, sub-family D (ALD), member 2 (ABCD2), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10329405] [evidence TAS]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10329405] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 10196381] [evidence TAS]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 10329405] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 10329405] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10704444] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11883941] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10329405] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	hALDR; ALDR; ABC39; ALDL1; ALDRP	hALDR; ALDR; ABC39; ALDL1; ALDRP
Homo sapiens	RefSeq	NM_031898.1	ILMN_11922	TEKT3	NM_031898.1	NM_031898.1		64518	13994249	NM_031898.1	TEKT3	NP_114104.1	ILMN_1799099	0002030176	S	1359	TGTTAACGAGGTACACGAGGTTGACGACACCATCCAGACCCTGCAGCAGC	17	-	15148141-15148190	17p12a	Homo sapiens tektin 3 (TEKT3), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	FLJ32828	FLJ32828
Homo sapiens	RefSeq	NM_031297.2	ILMN_25806	RNF208	NM_031297.3	NM_031297.3		727800	119220602	NM_031297.3	RNF208	NP_112587.2	ILMN_1653788	0000510612	S	467	ATCAGTACGTGATTCGGCCTGGCCCCTCGGCCTCGGCGGCTTCTTCGGCG	9	-	140115259-140115308	9q34.3f	Homo sapiens ring finger protein 208 (RNF208), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC88636; DKFZp761H1710	MGC88636
Homo sapiens	RefSeq	XM_926884.1	ILMN_25806	RNF208	NM_031297.3	NM_031297.3		727800	119220602	NM_031297.3	RNF208	NP_112587.2	ILMN_1722483	0006180474	S	212	AGATTGTCCACCCTGAAAAGTTCCCTGAGCTACCGGCTGCCCCCTGCTTC	9	-	140115514-140115563	9q34.3f	Homo sapiens ring finger protein 208 (RNF208), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC88636; DKFZp761H1710	
Homo sapiens	RefSeq	XM_934287.1	ILMN_37325	LOC144817	XM_945225.2	XM_945225.2		144817	113424334	XM_945225.2	LOC144817	XP_950318.1	ILMN_1754032	0000430653	A	1616	GGCCTGGGATGGCACCAGAGCTTTTTTACCCTTGACCAGATACTAGAGGG				13q14.11e	PREDICTED: Homo sapiens hypothetical protein LOC144817 (LOC144817), mRNA.					
Homo sapiens	RefSeq	NM_181486.1	ILMN_19141	TBX5	NM_181486.1	NM_181486.1		6910	31652231	NM_181486.1	TBX5	NP_852259.1	ILMN_2282379	0001010703	I	333	TTCTGGGTAAGCAGTAAACCCCGCATAAACCCCGGAGCCACCATGCCTGC	12	-	114843507-114843556	12q24.21a	Homo sapiens T-box 5 (TBX5), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14519429] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12237100] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12499378] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14519429] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12237100] [evidence IDA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 11161571] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 12845333] [evidence NAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 15138308] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 8988165] [evidence IMP]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 16183809] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [pmid 8988164] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [pmid 15138308] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the arm are generated and organized. Morphogenesis pertains to the creation of form. In humans, the arms are the two upper limbs of the body from the shoulder to the hand [goid 35117] [pmid 16183809] [evidence IMP]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [pmid 8988164] [evidence IMP]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [pmid 8988165] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 12499378] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 12845333] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11431700] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cardioblast differentiation, the process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 51891] [pmid 11431700] [evidence IDA]; The process whose specific outcome is the progression of the pericardium over time, from its formation to the mature structure. The pericardium is a double-walled sac that contains the heart and the roots of the aorta, vena cava and the pulmonary artery [goid 60039] [pmid 15138308] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell proliferation [goid 60044] [pmid 11161571] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12499378] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11431700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 16332960] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 12845333] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12499378] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12845333] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16332960] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12845333] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11431700] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12845333] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 12499378] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 11431700] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	HOS	HOS
Homo sapiens	RefSeq	XR_041488.1	ILMN_336125	LOC388436	XR_041488.1	XR_041488.1		388436	169210831	XR_041488.1	LOC388436		ILMN_3236535	0002260279	S	281	GATGTCGAAGTGGAGGCTCAGCAGGGTTGGAGGTTCCCGGAGTCTCCCAG	17	+	19063329-19063378	17p11.2e	PREDICTED: Homo sapiens misc_RNA (LOC388436), miscRNA.					
Homo sapiens	RefSeq	XM_001722078.1	ILMN_346738	PABPC1L	XM_001722078.1	XM_001722078.1		80336	169214818	XM_001722078.1	PABPC1L	XP_001722130.1	ILMN_3303612	0005490301	M	1949	CTTCCATGGCTGCCAAAAGGACAGTGTTTCTGGCTCTCAGCCCTAAGGCC				20q13.12a-q13.12b	PREDICTED: Homo sapiens poly(A) binding protein, cytoplasmic 1-like (PABPC1L), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	NM_079422.1	ILMN_29710	MYL1	NM_079422.1	NM_079422.1		4632	17986274	NM_079422.1	MYL1	NP_524146.1	ILMN_1805526	0004730435	I	48	GTGTTGCTGCCCAGCCGCTCCATCATGTCCTTCAGTGCTGACCAGATTGC	2	-	210875738-210875761:210876511-210876513:210876514-210876536	2q34b	Homo sapiens myosin, light polypeptide 1, alkali; skeletal, fast (MYL1), transcript variant 3f, mRNA.	A filament of myosin found in a muscle cell of any type [goid 5859] [pmid 3904738] [evidence NAS]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [pmid 3904738] [evidence NAS]; A filament of myosin found in a muscle cell of any type [goid 5859] [pmid 3904738] [evidence NAS]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [pmid 3904738] [evidence NAS]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence NAS]; The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated [goid 30049] [pmid 3904738] [evidence NAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence NAS]; The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated [goid 30049] [pmid 3904738] [evidence NAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 3904738] [evidence NAS]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 3904738] [evidence NAS]	MLC3F; MLC1F	MLC3F; MLC1F
Homo sapiens	RefSeq	XM_934529.1	ILMN_37323	HSPCAL3	XM_934529.1	XM_934529.1		3324	89033840	XM_934529.1	HSPCAL3	XP_939622.1	ILMN_1700810	0006330047	A	323	AGGTGAACGTATGGGTCGTGGAACAAAGGTTATCCTACACCTGAAAGAAG	11	-	27868579-27868628	11p14.1d	PREDICTED: Homo sapiens heat shock 90kDa protein 1, alpha-like 3, transcript variant 3 (HSPCAL3), mRNA.					
Homo sapiens	RefSeq	NR_024049.1	ILMN_366019	BCAR4	NR_024049.1	NR_024049.1		400500	195539323	NR_024049.1	BCAR4		ILMN_3191746	0003710689	A	1082	CAGCCCTGTGTACGGTTACAGTCGACGAGAACTTGCAGAAAACCACGAGG	16	-	11913869-11913918		Homo sapiens breast cancer anti-estrogen resistance 4 (BCAR4), non-coding RNA.					
Homo sapiens	RefSeq	NM_002486.3	ILMN_23411	NCBP1	NM_002486.4	NM_002486.4		4686	110349725	NM_002486.4	NCBP1	NP_002477.1	ILMN_1777528	0002600612	S	3171	CTGATGGGTTTACCCAGCTACCCAGTAGCATAACTTTTCACAGCTCGGGG	9	+	99473641-99473690	9q22.33b	Homo sapiens nuclear cap binding protein subunit 1, 80kDa (NCBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9342333] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9409616] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7937105] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9049306] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11333016] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11333016] [evidence EXP]; Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA [goid 5845] [pmid 9342333] [evidence IDA]; Any protein complex that binds to an mRNA cap at any time in the lifetime of the mRNA [goid 5845] [pmid 7651522] [evidence IDA]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 9342333] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 8069914] [evidence TAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of mRNA 3'-end processing [goid 31442] [pmid 9342333] [evidence IDA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule [goid 339] [pmid 8069914] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7478990] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9111328] [evidence IPI]	NCBP; CBP80; MGC2087	NCBP; CBP80
Homo sapiens	RefSeq	NM_000647.3	ILMN_28397	CCR2	NM_000647.3	NM_000647.3		1231	15451896	NM_000647.3	CCR2	NP_000638.1	ILMN_1769895	0006040711	I	1808	GCTTCGCAGATGTCCTTGATGCTCATATTGTTCCCTAATTTGCCAGTGGG	3	+	49041-49090		Homo sapiens chemokine (C-C motif) receptor 2 (CCR2), transcript variant A, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8995400] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15995708] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15995708] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8146186] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10623817] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10623817] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10751368] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10201901] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 8995400] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9548499] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9670957] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15995708] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Interacting selectively with a CCR2 chemokine receptor [goid 31727] [pmid 15995708] [evidence IDA]	CKR2A; MCP-1-R; CC-CKR-2; CCR2B; CMKBR2; CCR2A; CD192; CKR2; CKR2B	CC-CKR-2; CCR2A; CKR2; CKR2A; MCP-1-R; CCR2B; CMKBR2; CD192; CKR2B
Homo sapiens	RefSeq	NM_032592.1	ILMN_3829	PHACS	NM_032592.1	NM_032592.1		84680	14211920	NM_032592.1	PHACS	NP_115981.1	ILMN_2154287	0004860070	S	1827	CTTGCAGGCAAATCCCAAGTGGCAGAAGACCCCCGTCCCTCTCAGAGCCA	11	+	44061844-44061893	11p11.2e	Homo sapiens 1-aminocyclopropane-1-carboxylate synthase (PHACS), mRNA.				ACS	ACS
Homo sapiens	RefSeq	XR_037978.1	ILMN_348263	LOC100128717	XR_037978.1	XR_037978.1		100128717	169212156	XR_037978.1	LOC100128717		ILMN_3268398	0006760348	M	1445	CGGCTCTCTGAGAAGGCAGGAACCAAGACAAAGGCAACTCCAAGGTGGAG				17p11.1c	PREDICTED: Homo sapiens misc_RNA (LOC100128717), miscRNA.					
Homo sapiens	RefSeq	NM_001017987.2	ILMN_15092	C5ORF45	NM_001017987.2	NM_001017987.2		51149	65508249	NM_001017987.2	C5orf45	NP_001017987.1	ILMN_2409879	0000630270	A	308	TCAAGACCTGCCTAGAAAAAGGAAGTGGAGCAGGAGCACCGTCCAGCCTC	5	-	179267930-179267959:179268907-179268926	5q35.3e	Homo sapiens chromosome 5 open reading frame 45 (C5orf45), transcript variant 2, mRNA.				MGC78537; MGC65027; DKFZp686L2452	MGC78537; MGC65027; DKFZp686L2452
Homo sapiens	Unigene	Hs.493239	ILMN_96589	HS.493239	Hs.493239		Hs.493239		27882754	BX119072			ILMN_1870621	0006590678	S	76	TCAGAACGTCCTCAGAACCGCAGGAGCCAAGAGGAAATCTCCCGTAGGGG	9	+	105346-105395		BX119072 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998I214165, mRNA sequence					
Homo sapiens	RefSeq	NR_030158.1	ILMN_387784	MIR483	NR_030158.1	NR_030158.1		619552	262205130	NR_030158.1	MIR483		ILMN_3310810	0002600577	S	7	AAGACGGGAGGAAAGAAGGGAGTGGTTCCATCACGCCTCCTCACTCCTCT				11p15.5a	Homo sapiens microRNA 483 (MIR483), microRNA.					
Homo sapiens	Unigene	Hs.552496	ILMN_111028	HS.552496	Hs.552496		Hs.552496		58567112	BP394623			ILMN_1851092	0006290196	S	222	GCAGCACAAGAACCTGCCCCCGAAGTCATGTCACTCTAGTATTTAGCAGC	20	+	38078218-38078267		BP394623 Homo sapiens pancreatic islet Homo sapiens cDNA clone hbt01270 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003534.2	ILMN_29118	HIST1H3G	NM_003534.2	NM_003534.2		8355	21264570	NM_003534.2	HIST1H3G	NP_003525.1	ILMN_1726815	0000510441	S	387	CCGCATTCGTGGGGAGAGAGCGTAGAGGTTTCCGGGCAGTAATTCTATCC	6	-	26379155-26379180:26379181-26379204	6p22.1d	Homo sapiens histone cluster 1, H3g (HIST1H3G), mRNA.				H3FH; H3/h	H3FH; H3/h
Homo sapiens	RefSeq	XM_938059.1	ILMN_44328	LOC648982	XM_938059.1	XM_938059.1		648982	88987647	XM_938059.1	LOC648982	XP_943152.1	ILMN_1663430	0006840201	S	905	GAGGAAATCAGTGGTGCTTCAGGATATTGTGAATTTGGGCTTCTGAAAGC					PREDICTED: Homo sapiens hypothetical protein LOC648982 (LOC648982), mRNA.					
Homo sapiens	RefSeq	NM_001013742.1	ILMN_8932	DGKK	NM_001013742.1	NM_001013742.1		139189	62000701	NM_001013742.1	DGKK	NP_001013764.1	ILMN_1707799	0005700435	S	3561	GCTGAGAAGTGCTGAGGATGAGACTGCACTACAAAGCGCCCTGGATGCCA	X	-	50146137-50146186	Xp11.22c	Homo sapiens diacylglycerol kinase, kappa (DGKK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16210324] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 16210324] [evidence IDA]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 16210324] [evidence IDA]; The chemical reactions and pathways involving diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues. DAG is a normal intermediate in the biosynthesis of phosphatidyl phospholipids and is released from them by phospholipase C activity. DAG from phosphatidyl inositol polyphosphates is important in signal transduction [goid 46339] [pmid 16210324] [evidence IDA]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 16210324] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_498987.2	ILMN_42150	LOC441054	XM_498987.2	XM_498987.2		441054	88981350	XM_498987.2	LOC441054	XP_498987.2	ILMN_1774390	0004200180	S	588	GGAACAATAGGTGGTCCAGTCCCATTTTTCAGCGCACAGTCAAAACCTCG				4q35.1f	PREDICTED: Homo sapiens hypothetical protein LOC441054 (LOC441054), mRNA.					
Homo sapiens	RefSeq	NM_001709.3	ILMN_7507	BDNF	NM_001709.3	NM_001709.3		627	34106711	NM_001709.3	BDNF	NP_001700.2	ILMN_1751276	0000770603	A	3624	CTTGCTGTGGTCTCTTTGTGGCAGAAGTGTTTCATGCATGGCAGCAGGCC	11	-	27633301-27633350	11p14.1d	Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 4, mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 2236018] [evidence TAS]	MGC34632	MGC34632
Homo sapiens	RefSeq	NM_001709.3	ILMN_7507	BDNF	NM_001709.3	NM_001709.3		627	34106711	NM_001709.3	BDNF	NP_001700.2	ILMN_1761910	0004880356	I	102	CCCTCCACCTCCTGCTCGGGGGGCTTTAATGAGACACCCACCGCTGCTGT	11	-	27678401-27678450	11p14.1d	Homo sapiens brain-derived neurotrophic factor (BDNF), transcript variant 4, mRNA.	A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process by which an axon recognizes and binds to a set of cells with which it may form stable connections [goid 7412] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; The process by which a neuronal cell in a multicellular organism interprets its surroundings [goid 8038] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 19222] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; The response of an organism to a perceived external threat [goid 42596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of neuron differentiation [goid 45666] [evidence IEA]; Any process that modulates the frequency, rate or extent of programmed cell death that occurs in the retina [goid 46668] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 2236018] [evidence TAS]	MGC34632	MGC34632
Homo sapiens	RefSeq	NM_003887.1	ILMN_180678	DDEF2	NM_003887.1	NM_003887.1		8853	4502248	NM_003887.1	DDEF2	NP_003878.1	ILMN_1757237	0002030041	S	5382	GCAGCTGCAGGATTCTGGCATTTTGCATGCCATTCTCCATCAGATCTGGG	2	+	9462928-9462977	2p25.1e	Homo sapiens development and differentiation enhancing factor 2 (DDEF2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11716503] [evidence IPI]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PAG3; Pap-alpha; SHAG1; FLJ42910; AMAP2; PAP; KIAA0400; CENTB3	PAG3; Pap-alpha; SHAG1; FLJ42910; ASAP2; AMAP2; PAP; KIAA0400; CENTB3
Homo sapiens	RefSeq	XM_944056.1	ILMN_36898	LOC400456	XM_944056.1	XM_944056.1		400456	89039307	XM_944056.1	LOC400456	XP_949149.1	ILMN_1699020	0003850196	I	79	GCCCAGGATGACAGCTGTGCCCAGACACCAAGGACACCTAGTCTAGAAGA				15q26.2b	PREDICTED: Homo sapiens hypothetical gene supported by BC040875 (LOC400456), mRNA.					
Homo sapiens	RefSeq	XM_928834.1	ILMN_39442	LOC645851	XM_940488.2	XM_940488.2		645851	113427349	XM_940488.2	LOC645851	XP_945581.1	ILMN_1665323	0000110367	S	245	GTTATCTGCATCACTTCCAGGTCCACCCTTTCTTTCGGGGTGTGGCCTTC				17q11.2a	PREDICTED: Homo sapiens hypothetical LOC645851 (LOC645851), mRNA.					
Homo sapiens	RefSeq	NM_020436.2	ILMN_18424	SALL4	NM_020436.2	NM_020436.2		57167	37595567	NM_020436.2	SALL4	NP_065169.1	ILMN_1695687	0005050270	S	3218	GCGGTCAGCTAAGGGAGAACTTGCGTGGAAGGAGCAATGCAGACACAGTG	20	-	49834172-49834210:49834211-49834221	20q13.2a	Homo sapiens sal-like 4 (Drosophila) (SALL4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC133050; DRRS; ZNF797; HSAL4; dJ1112F19.1	MGC133050; ZNF797; HSAL4; dJ1112F19.1; DRRS
Homo sapiens	RefSeq	NM_152744.2	ILMN_178538	SDK1	NM_001079653.1	NM_001079653.1		221935	119220549	NM_001079653.1	SDK1	NP_001073121.1	ILMN_1810540	0000010541	S	2697	CCAAGCACTCCTTCGTGAACCACTACATGAGCGACCCCACCTACTACAAC	7	+	4271313-4271362	7p22.2b-p22.2a	Homo sapiens sidekick homolog 1, cell adhesion molecule (chicken) (SDK1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ31425	FLJ31425
Homo sapiens	RefSeq	NM_007359.3	ILMN_28416	CASC3	NM_007359.3	NM_007359.3		22794	24475733	NM_007359.3	CASC3	NP_031385.2	ILMN_1665004	0002970463	S	3528	GCCTAAGGAAGCCAGTCACCTTCTGGGCAAGGGCTCCTATCTTTCCTCCC	17	+	35581372-35581421	17q21.1d	Homo sapiens cancer susceptibility candidate 3 (CASC3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process by which mRNA is transported to, or maintained in, a specific location within the cell [goid 8298] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 12080473] [evidence IDA]	BTZ; MLN51	BTZ; MLN51
Homo sapiens	RefSeq	NM_024743.2	ILMN_14617	UGT2A3	NM_024743.2	NM_024743.2		79799	42476019	NM_024743.2	UGT2A3	NP_079019.2	ILMN_2121979	0001050392	S	2517	GCTTGTTCTGAAAGTAAGATCAGTGAACTGCTTTTCAGTCTCAATCTTTG	4	-	69829163-69829212	4q13.2c	Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide A3 (UGT2A3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ21934	FLJ21934
Homo sapiens	RefSeq	NM_024743.2	ILMN_14617	UGT2A3	NM_024743.2	NM_024743.2		79799	42476019	NM_024743.2	UGT2A3	NP_079019.2	ILMN_1692861	0007330521	S	2169	CATAGACCTCATCTAGATGTCATGGCCTACATTTCTGCCATCACTCAACC	4	-	69829511-69829560	4q13.2c	Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide A3 (UGT2A3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ21934	FLJ21934
Homo sapiens	RefSeq	NM_001014988.1	ILMN_30259	LAT	NM_001014987.1	NM_001014987.1		27040	62739154	NM_001014987.1	LAT	NP_001014987.1	ILMN_1691539	0003610288	A	1253	CAGCCTGAGAATGACCTGCCCTGGCCCCAGCCCTACTCTGTGTAATAGAA	16	+	28909202-28909251	16p11.2e	Homo sapiens linker for activation of T cells (LAT), transcript variant 2, mRNA.	An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IEA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [pmid 12646565] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11607830] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12646565] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 14722116] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 15100278] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 15100278] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 12646565] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 12646565] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 12646565] [evidence IMP]; The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell activation [goid 50863] [pmid 12646565] [evidence IMP]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9489702] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16938345] [evidence IPI]	pp36; LAT1	pp36; LAT1
Homo sapiens	RefSeq	NM_001014987.1	ILMN_30259	LAT	NM_001014987.1	NM_001014987.1		27040	62739154	NM_001014987.1	LAT	NP_001014987.1	ILMN_2404625	0000460259	A	1270	GCCCTGGCCCCAGCCCTACTCTGTGTAATAGAATAAAGGCCTGCGTGTGT	16	+	28909219-28909268	16p11.2e	Homo sapiens linker for activation of T cells (LAT), transcript variant 2, mRNA.	An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [evidence IEA]; An area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell formed through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and the target cell and facilitating activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction [goid 1772] [pmid 12646565] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11607830] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12646565] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 14722116] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 15100278] [evidence IDA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 15100278] [evidence IDA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 12646565] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 12646565] [evidence IMP]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 12646565] [evidence IMP]; The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell [goid 43303] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell activation [goid 50863] [pmid 12646565] [evidence IMP]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9489702] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16938345] [evidence IPI]	pp36; LAT1	pp36; LAT1
Homo sapiens	RefSeq	NM_202002.1	ILMN_10352	FOXM1	NM_202003.1	NM_202003.1		2305	42544160	NM_202003.1	FOXM1	NP_973732.1	ILMN_1716400	0002650364	A	3067	ACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCCACCTCC	12	-	2967199-2967248	12p13.33a	Homo sapiens forkhead box M1 (FOXM1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10523841] [evidence TAS]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IEA]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9032290] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 10523841] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9032290] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9441747] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10523841] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9032290] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10523841] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16809346] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10523841] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MPP-2; INS-1; HFH11; TGT3; MPP2; PIG29; TRIDENT; HFH-11; FKHL16; MPHOSPH2; HNF-3; FOXM1B	PIG29; HFH-11; FKHL16; MPP-2; INS-1; HFH11; MPP2; TRIDENT; MPHOSPH2; HNF-3; FOXM1B
Homo sapiens	RefSeq	XM_941924.1	ILMN_307526	TOMM5	NM_001001790.2	NM_001001790.2		401505	153791980	NM_001001790.2	TOMM5	NP_001001790.1	ILMN_1808661	0005310241	A	130	CGCCGAAGCTGGACCCGGAGGAGATGAAACGGAAGATGCGCGAGGATGTG	9	-	37592457-37592506	9p13.2a	Homo sapiens translocase of outer mitochondrial membrane 5 homolog (yeast) (TOMM5), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.				RP11-263I4.1; bA613M10.3	
Homo sapiens	RefSeq	NM_018201.2	ILMN_161918	TBC1D13	NM_018201.2	NM_018201.2		54662	21361636	NM_018201.2	TBC1D13	NP_060671.2	ILMN_1662161	0000730465	S	3601	CCTGAGGCTTCCTGCTTGAGAACCTGCCCCCTGGATCTTGGACACTTACA	9	+	130612355-130612404	9q34.11c	Homo sapiens TBC1 domain family, member 13 (TBC1D13), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP11-545E17.5; FLJ10743	RP11-545E17.5; FLJ10743
Homo sapiens	RefSeq	NM_152766.2	ILMN_25334	C17ORF61	NM_152766.2	NM_152766.2		254863	37059761	NM_152766.2	C17orf61	NP_689979.1	ILMN_2201533	0002340521	S	332	TGGGCTGGCTTGCCTTGGCTCTTTGAGCTCCCTTTTGCTTAATTACTGGG	17	-	7306360-7306384:7306385-7306409	17p13.1d	Homo sapiens chromosome 17 open reading frame 61 (C17orf61), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC40107	MGC40107
Homo sapiens	RefSeq	NM_000867.2	ILMN_29202	HTR2B	NM_000867.3	NM_000867.3		3357	141801728	NM_000867.3	HTR2B	NP_000858.2	ILMN_1735764	0006940037	S	1820	CCTGCCATGTACCAGAGTCCAATGAGGCTCCGAAGTTCAACCATTCAGTC	2	-	231681556-231681605	2q37.1b	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 2B (HTR2B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8143856] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 8143856] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 7926008] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 7926008] [evidence TAS]	5-HT2B; 5-HT(2B)	5-HT2B; 5-HT(2B)
Homo sapiens	RefSeq	NM_054026.1	ILMN_7108	CNOT7	NM_054026.2	NM_054026.2		29883	85067504	NM_054026.2	CNOT7	NP_473367.2	ILMN_1686477	0006590270	I	1526	GGCTCTTTTACTGCATTGAGTCTTAAAAGGGGGGTTGAATTCCGAAGGGA	8	-	17133759-17133808	8p22b	Homo sapiens CCR4-NOT transcription complex, subunit 7 (CNOT7), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9820826] [evidence IDA]; A large multimeric transcription factor complex that can regulate transcription positively or negatively; consists of a core complex plus additional proteins; may interact with other proteins to control initiation of transcription. In Saccharomyces the core complex comprises Ccr4p, Caf1p, Not1p, Not2p, Not3p, Not4p, and Not5p; Caf4p, Caf16p, and several less well characterized proteins [goid 30014] [pmid 9820826] [evidence NAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9820826] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9820826] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9820826] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9820826] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9820826] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	CAF1; hCAF-1	CAF1; hCAF-1
Homo sapiens	RefSeq	NM_012471.1	ILMN_162487	TRPC5	NM_012471.2	NM_012471.2		7224	93004076	NM_012471.2	TRPC5	NP_036603.1	ILMN_1772242	0006620343	S	5494	AGCCTGGAGAAGAGCAAAATGGAGGGGGAGGGGCCAGAAATAGGAGGAGG	X	-	111019657-111019706	Xq23a	Homo sapiens transient receptor potential cation channel, subfamily C, member 5 (TRPC5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10493832] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 10493832] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10493832] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15757897] [evidence IPI];  [goid 15279] [pmid 10493832] [evidence TAS]	TRP5	TRP5
Homo sapiens	RefSeq	NM_001853.2	ILMN_178163	COL9A3	NM_001853.3	NM_001853.3		1299	119508425	NM_001853.3	COL9A3	NP_001844.3	ILMN_1740155	0003520634	S	1786	AGAGGAAACCAGGGTGACAGAGGAGACAAAGGCGCGGCAGGAGCAGGGCT	20	+	60939059-60939062:60940481-60940526	20q13.33d	Homo sapiens collagen, type IX, alpha 3 (COL9A3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils [goid 5594] [pmid 8586434] [evidence TAS]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	EDM3; FLJ90759; MED; IDD; DJ885L7.4.1	EDM3; MED; IDD; DJ885L7.4.1
Homo sapiens	RefSeq	NM_001792.2	ILMN_28694	CDH2	NM_001792.2	NM_001792.2		1000	14589888	NM_001792.2	CDH2	NP_001783.2	ILMN_1779228	0001170709	S	4032	GCCTCTGTATTGTGTACCAGAATATAAATGATACACCTCTGACCCCAGCG	18	-	23784959-23785008	18q12.1a	Homo sapiens cadherin 2, type 1, N-cadherin (neuronal) (CDH2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2384753] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD325; CDw325; CDHN; NCAD	CD325; CDw325; CDHN; NCAD
Homo sapiens	RefSeq	NM_001010862.1	ILMN_26060	SPIN3	NM_001010862.1	NM_001010862.1		169981	58197547	NM_001010862.1	SPIN3	NP_001010862.1	ILMN_1801045	0001510554	S	1407	GCCACTCACAAGTTTTTCTCTACCTAACTGAAGTTGCCCTCTTCTGCTGG	X	-	57019713-57019762	Xp11.1b	Homo sapiens spindlin family, member 3 (SPIN3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]		MGC40395; FLJ41127; bA445O16.1	MGC40395; FLJ41127; bA445O16.1
Homo sapiens	RefSeq	NM_182926.1	ILMN_29637	KTN1	NM_182926.2	NM_182926.2		3895	118498360	NM_182926.2	KTN1	NP_891556.1	ILMN_1740523	0005080162	S	4361	CCAGGTGTTAGAGTGATCATCCTCTGGCCTACCTTGACACATGCTCTCCT	14	+	55216146-55216156:55217157-55217161:55217162-55217195	14q22.3b	Homo sapiens kinectin 1 (kinesin receptor) (KTN1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7787243] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 7787243] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7787243] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [pmid 7787243] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	KIAA0004; MGC133337; MU-RMS-40.19; CG1; KNT	KIAA0004; MU-RMS-40.19; CG1; KNT
Homo sapiens	RefSeq	XM_934210.1	ILMN_45687	LOC647041	XM_934210.1	XM_934210.1		647041	88943615	XM_934210.1	LOC647041	XP_939303.1	ILMN_1782350	0002760523	S	695	TAAGTGCCAAAGAGCGCGGGGGCGTTTCCCACGCCAGGACAATTCCCACA	1	-	179554116-179554165	1q25.3b	PREDICTED: Homo sapiens hypothetical LOC647041 (LOC647041), mRNA.					
Homo sapiens	RefSeq	NM_018690.1	ILMN_180750	APOB48R	NM_018690.2	NM_018690.2		55911	119220597	NM_018690.2	APOB48R	NP_061160.2	ILMN_1697925	0006250241	A	3363	CTGTGGACACATCCTCTCCACCCTCTGGGCCTCAGTGTCTTGATGTATCA	16	+	28417416-28417465	16p11.2e	Homo sapiens apolipoprotein B48 receptor (APOB48R), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10852956] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [pmid 10852956] [evidence TAS]; Combining with an apolipoprotein, the protein component of a lipoprotein, to initiate a change in cell activity [goid 30226] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Combining with an apolipoprotein, the protein component of a lipoprotein, to initiate a change in cell activity [goid 30226] [evidence IEA]		
Homo sapiens	RefSeq	NM_001008723.1	ILMN_23035	CCDC147	NM_001008723.1	NM_001008723.1		159686	56961679	NM_001008723.1	CCDC147	NP_001008723.1	ILMN_2100285	0000580025	S	2813	GGGGGAATCTCAAAGTCCTTGGATCATAGAACTGAGTGCTGAGAATCCAG	10	+	106139793-106139842	10q25.1a	Homo sapiens coiled-coil domain containing 147 (CCDC147), mRNA.				bA554P13.1; bA127L20.4; FLJ35908; MGC126475; C10orf80; bA127L20.5; RP11-554P13.1	bA554P13.1; bA127L20.4; FLJ35908; MGC126475; C10orf80; bA127L20.5; RP11-554P13.1
Homo sapiens	RefSeq	NM_001008723.1	ILMN_23035	CCDC147	NM_001008723.1	NM_001008723.1		159686	56961679	NM_001008723.1	CCDC147	NP_001008723.1	ILMN_2100287	0003450687	S	2960	GTTCAGTTAGGCTGACCTATTGCATGAAGCAAATCTTTTGTTGCTACCCC	10	+	106139940-106139978:106141981-106141991	10q25.1a	Homo sapiens coiled-coil domain containing 147 (CCDC147), mRNA.				bA554P13.1; bA127L20.4; FLJ35908; MGC126475; C10orf80; bA127L20.5; RP11-554P13.1	bA554P13.1; bA127L20.4; FLJ35908; MGC126475; C10orf80; bA127L20.5; RP11-554P13.1
Homo sapiens	RefSeq	NM_005740.2	ILMN_22246	DNAL4	NM_005740.2	NM_005740.2		10126	51093842	NM_005740.2	DNAL4	NP_005731.1	ILMN_1801845	0000270678	S	1311	CTGCCCGCGACTTCGCATCAGGGACCGCATGCTGATTTGTACTGCTCTCT	22	-	39174639-39174688	22q13.1c	Homo sapiens dynein, axonemal, light chain 4 (DNAL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11157096] [evidence EXP]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence NAS]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence NAS]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 11157096] [evidence EXP]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive some other reaction, for example ion transport across a membrane [goid 42623] [evidence NAS]	PIG27	PIG27
Homo sapiens	RefSeq	NM_181690.1	ILMN_5416	AKT3	NM_181690.1	NM_181690.1		10000	32307162	NM_181690.1	AKT3	NP_859029.1	ILMN_2325610	0005870561	A	1216	GGGCTCTTGATAAAGGATCCAAATAAACGCCTTGGTGGAGGACCAGATGA	1	-	243708878-243708899:243716031-243716058	1q44a	Homo sapiens v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) (AKT3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10092583] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10092583] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12176997] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKBG; PKBG; DKFZP434N0250; RAC-gamma; RAC-PK-gamma; STK-2	PRKBG; PKBG; DKFZP434N0250; RAC-gamma; RAC-PK-gamma; STK-2
Homo sapiens	RefSeq	NM_181690.1	ILMN_5416	AKT3	NM_181690.1	NM_181690.1		10000	32307162	NM_181690.1	AKT3	NP_859029.1	ILMN_1733598	0002570044	I	1595	GCCTGCCTCACCGTCCTCACCCATCAAAAGCACCAGCAGGCACGTTAACT	1	-	243651593-243651642	1q44a	Homo sapiens v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) (AKT3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10092583] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10092583] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12176997] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKBG; PKBG; DKFZP434N0250; RAC-gamma; RAC-PK-gamma; STK-2	PRKBG; PKBG; DKFZP434N0250; RAC-gamma; RAC-PK-gamma; STK-2
Homo sapiens	RefSeq	NM_181690.1	ILMN_5416	AKT3	NM_181690.1	NM_181690.1		10000	32307162	NM_181690.1	AKT3	NP_859029.1	ILMN_2325612	0005490246	A	963	AGAAGGGATCACAGATGCAGCCACCATGAAGACATTCTGTGGCACTCCAG	1	-	243727038-243727087	1q44a	Homo sapiens v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) (AKT3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10092583] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10092583] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12176997] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKBG; PKBG; DKFZP434N0250; RAC-gamma; RAC-PK-gamma; STK-2	PRKBG; PKBG; DKFZP434N0250; RAC-gamma; RAC-PK-gamma; STK-2
Homo sapiens	RefSeq	XM_372319.3	ILMN_32206	LOC389983	XM_372319.3	XM_372319.3		389983	89031498	XM_372319.3	LOC389983	XP_372319.3	ILMN_1706027	0006330403	S	61	CTCCCTACTTCACCCCCAGAGTCTAAGAAAGGATCCACACTTAAAGAGGT	10	-	81293883-81293885:81296266-81296312		PREDICTED: Homo sapiens similar to acyl-CoA synthetase medium-chain family member 1 (LOC389983), mRNA.					
Homo sapiens	RefSeq	XM_927009.1	ILMN_40960	LOC643713	XM_927009.1	XM_927009.1		643713	89038225	XM_927009.1	LOC643713	XP_932102.1	ILMN_1728603	0002850246	S	1239	CAAATGTGGAGCTGTTGTGTATTGTCACGGGGAGGAGAAATGCTACTGGC	15	+	28573153-28573202		PREDICTED: Homo sapiens hypothetical protein LOC643713 (LOC643713), mRNA.					
Homo sapiens	Unigene	Hs.216701	ILMN_82440	HS.216701	Hs.216701		Hs.216701		5817086	AL110176			ILMN_1882018	0006330594	S	1404	CATCATCCTGTCCTCGGTGACACCTGTTTCTCTCCTTTGTCAACATCACC	3	-	147260679-147260728		Homo sapiens mRNA; cDNA DKFZp564I0816 (from clone DKFZp564I0816)					
Homo sapiens	RefSeq	XM_373926.3	ILMN_172291	LOC388814	XM_373926.4	XM_373926.4		388814	113429097	XM_373926.4	LOC388814	XP_373926.1	ILMN_1729831	0004200328	A	164	CCTGGATCAGCCCTCTCCCGTCTGTCATCTCCAACAGATACAAAGCCAGC	21	-	15665037-15665086	21q21.1a	PREDICTED: Homo sapiens hypothetical LOC388814 (LOC388814), mRNA.					
Homo sapiens	RefSeq	XM_933775.1	ILMN_39055	LOC441632	XM_933775.1	XM_933775.1		441632	89035406	XM_933775.1	LOC441632	XP_938868.1	ILMN_1660824	0005550605	A	1	CCCCTTTTGTCTTTCATCTGTTTCTGGTTCATTGGCTGGGAGTTGCACCT	12	-	31297710-31297759	12p11.21b	PREDICTED: Homo sapiens similar to ribosomal protein L13a, transcript variant 3 (LOC441632), mRNA.					
Homo sapiens	RefSeq	NM_015032.1	ILMN_20213	PDS5B	NM_015032.1	NM_015032.1		23047	7657268	NM_015032.1	PDS5B	NP_055847.1	ILMN_1746696	0000870167	I	7127	CTTGCTGCAGTGCAACAGGAGGCTTTTTCAGTGATCTTCACTGTATATGT	13	+	32249847-32249896	13q13.1b	Homo sapiens PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) (PDS5B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cell cycle process whereby the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission [goid 7064] [pmid 15855230] [evidence IMP]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10963680] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10215036] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10215036] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15855230] [evidence IPI]	AS3; PDS5B; FLJ23236; RP1-267P19.1; KIAA0979; APRIN; CG008	AS3; PDS5B; FLJ23236; RP1-267P19.1; KIAA0979; APRIN; CG008
Homo sapiens	RefSeq	NM_015928.1	ILMN_20213	PDS5B	NM_015032.1	NM_015032.1		23047	7657268	NM_015032.1	PDS5B	NP_055847.1	ILMN_1675695	0005220575	A	5053	TTGTCTGCCATTACACCAGAAGGATGCCTCTGATAGGAGGACAACCATGC	13	+	32247773-32247822	13q13.1b	Homo sapiens PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) (PDS5B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cell cycle process whereby the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission [goid 7064] [pmid 15855230] [evidence IMP]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10963680] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10215036] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10215036] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15855230] [evidence IPI]	AS3; PDS5B; FLJ23236; RP1-267P19.1; KIAA0979; APRIN; CG008	AS3; FLJ23236; RP1-267P19.1; KIAA0979; CG008
Homo sapiens	RefSeq	XM_001715923.1	ILMN_342958	LOC729830	XM_001715923.1	XM_001715923.1		729830	169167217	XM_001715923.1	LOC729830	XP_001715975.1	ILMN_3301662	0002940019	M	2680	CCCGTGAGGACTCAAAGCACCCCATTCACAGGTGACCATCTTAAATTGCT				4q31.3b	PREDICTED: Homo sapiens similar to CG3558-PA, isoform A (LOC729830), mRNA.					
Homo sapiens	RefSeq	NM_018024.1	ILMN_574	WDYHV1	NM_018024.1	NM_018024.1		55093	8922280	NM_018024.1	WDYHV1	NP_060494.1	ILMN_1695491	0002810167	S	1006	GCCAGTAATCGTTTTTGTTCAGATAGAGGTGTGGAGGTAGAGCCAGCCCC	8	+	124453918-124453967	8q24.13c	Homo sapiens WDYHV motif containing 1 (WDYHV1), mRNA.				FLJ10204	FLJ10204
Homo sapiens	RefSeq	NM_018024.1	ILMN_574	WDYHV1	NM_018024.1	NM_018024.1		55093	8922280	NM_018024.1	WDYHV1	NP_060494.1	ILMN_3235472	0005290187	S	1004	AAGCCAGTAATCGTTTTTGTTCAGATAGAGGTGTGGAGGTAGAGCCAGCC	8	+	124453916-124453965	8q24.13c	Homo sapiens WDYHV motif containing 1 (WDYHV1), mRNA.				FLJ10204	FLJ10204
Homo sapiens	RefSeq	NM_032627.2	ILMN_14748	SSBP4	NM_032627.2	NM_032627.2		170463	58218982	NM_032627.2	SSBP4	NP_116016.1	ILMN_1720137	0004760167	A	1189	TGTACACTATCATGAACCCCATCGGGCAGGGCGCCGGCAGGGCTAATTTC	19	+	18404807-18404853:18404945-18404947	19p13.11c	Homo sapiens single stranded DNA binding protein 4 (SSBP4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC3181	MGC3181
Homo sapiens	RefSeq	NM_001007275.1	ILMN_16690	DUSP13	NM_001007275.1	NM_001007275.1		51207	56117825	NM_001007275.1	DUSP13	NP_001007276.1	ILMN_2373666	0000050333	A	473	CGTACGCAGCCCGGGACAAGAGCAAGCTGATCCAGCTGGGAATCACCCAC	10	-	76525510-76525559	10q22.2c	Homo sapiens dual specificity phosphatase 13 (DUSP13), transcript variant 5, mRNA.		The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 10585869] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 10585869] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10585869] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [pmid 10585869] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	SKRP4; MDSP; DUSP13B; DUSP13A; TMDP; BEDP; FLJ32450	SKRP4; MDSP; DUSP13B; DUSP13A; TMDP; BEDP; FLJ32450
Homo sapiens	RefSeq	NM_015374.1	ILMN_28554	UNC84B	NM_015374.1	NM_015374.1		25777	31742497	NM_015374.1	UNC84B	NP_056189.1	ILMN_2099301	0002640411	S	3779	CTCCATCCCGAGGCAGCCAGGGTTTGTTTTGCGCTCTCCTGTCACAAATG	22	-	39130814-39130863	22q13.1c	Homo sapiens unc-84 homolog B (C. elegans) (UNC84B), mRNA.	The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [pmid 16380439] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle [goid 7052] [pmid 10375507] [evidence TAS]; The directed movement of the nucleus [goid 7097] [pmid 10508607] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 10375507] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0668; MGC133055; SUN2; MGC133056	KIAA0668; MGC133055; SUN2; MGC133056
Homo sapiens	RefSeq	NM_152244.1	ILMN_9237	SNX11	NM_152244.1	NM_152244.1		29916	23111027	NM_152244.1	SNX11	NP_689450.1	ILMN_1696051	0000430445	I	283	AGCCAGCCTGGATCATTTGTTGGCAGTACATATTGGCTGAAGTCAGTTTT	17	+	43543070-43543119	17q21.32b	Homo sapiens sorting nexin 11 (SNX11), transcript variant 1, mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	MGC111019	MGC111019
Homo sapiens	RefSeq	NM_152244.1	ILMN_9237	SNX11	NM_152244.1	NM_152244.1		29916	23111027	NM_152244.1	SNX11	NP_689450.1	ILMN_1683950	0000130446	A	2280	CTCCCTCCTCTGGCTATCCTACCCTGTCTGTGGGCTCTTTTACTACCAGC	17	+	43554982-43555031	17q21.32b	Homo sapiens sorting nexin 11 (SNX11), transcript variant 1, mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	MGC111019	MGC111019
Homo sapiens	RefSeq	NM_002589.2	ILMN_17065	PCDH7	NM_032456.1	NM_032456.1		5099	14589932	NM_032456.1	PCDH7	NP_115832.1	ILMN_1766668	0006400291	A	3843	GCCTCTCTACAGCAGCATTGTCACTGTGGAGGCTTCTAAGCCAAATGGAC	4	+	30334977-30335026	4p15.1e-p15.1d	Homo sapiens protocadherin 7 (PCDH7), transcript variant b, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9615233] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9615233] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BHPCDH; BH-Pcdh	BHPCDH; BH-Pcdh
Homo sapiens	RefSeq	NM_032456.1	ILMN_17065	PCDH7	NM_032456.1	NM_032456.1		5099	14589932	NM_032456.1	PCDH7	NP_115832.1	ILMN_1722890	0006060082	I	4213	CCCAGGGAGGGCTAATAACTCTGAGACAGATTATCTTCTGTAAAGTTTTG	4	+	30335347-30335361:30335362-30335396	4p15.1e-p15.1d	Homo sapiens protocadherin 7 (PCDH7), transcript variant b, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9615233] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9615233] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BHPCDH; BH-Pcdh	BHPCDH; BH-Pcdh
Homo sapiens	RefSeq	NM_173586.1	ILMN_167880	MGC34821	NM_173586.1	NM_173586.1		283238	27734796	NM_173586.1	MGC34821	NP_775857.1	ILMN_1701376	0000070224	S	1364	GGCCTAGTCCTGAGCCATGATGTCCATAGTACCTATTGTGTCACCTGAGA	11	-	62642818-62642820:62642821-62642867	11q12.3b	Homo sapiens hypothetical protein MGC34821 (MGC34821), mRNA.					
Homo sapiens	Unigene	Hs.276796	ILMN_84302	HS.276796	Hs.276796		Hs.276796		32014446	BX497642			ILMN_1850086	0001780333	S	540	TCCTTTGCTGGTGGGGAGCAGGGGGGACTTGCCTGTGCATTATGAGATAG	14	-	91291099-91291148		DKFZp779O1834_r1 779 (synonym: hncc1) Homo sapiens cDNA clone DKFZp779O1834 5, mRNA sequence					
Homo sapiens	RefSeq	NM_003333.2	ILMN_163497	UBA52	NM_001033930.1	NM_001033930.1		7311	77539054	NM_001033930.1	UBA52	NP_001029102.1	ILMN_1782977	0004220519	S	393	GATGATCTGCCGCAAGTGCTATGCTCGCCTTCACCCTCGTGCTGTCAACT	19	+	18546768-18546782:18546867-18546901	19p13.11c	Homo sapiens ubiquitin A-52 residue ribosomal protein fusion product 1 (UBA52), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 2581967] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	CEP52; HUBCEP52; MGC126881; MGC57125; RPL40; MGC126879	CEP52; HUBCEP52; MGC57125; RPL40; RPS27A
Homo sapiens	RefSeq	NR_031642.1	ILMN_388717	MIR548F1	NR_031642.1	NR_031642.1		100302192	269847240	NR_031642.1	MIR548F1		ILMN_3310990	0000620632	S	24	CAGTTTTTGACATTACTTTCAAAGACAAAAACTGTAATTACTTTTGGACC					Homo sapiens microRNA 548f-1 (MIR548F1), microRNA.					
Homo sapiens	RefSeq	XM_931676.1	ILMN_35041	LOC643599	XM_931676.2	XM_931676.2		643599	113421676	XM_931676.2	LOC643599	XP_936769.1	ILMN_1703682	0000290424	S	169	GGGCTACTTCATGATGGCCCAGATGTCTCTGATCCTGTAGTGTGGTGCCC	10	-	92710942-92710991	10q23.31d	PREDICTED: Homo sapiens hypothetical LOC643599 (LOC643599), mRNA.					
Homo sapiens	RefSeq	NM_145008.1	ILMN_21942	YPEL4	NM_145008.1	NM_145008.1		219539	21450726	NM_145008.1	YPEL4	NP_659445.1	ILMN_1726624	0003890082	S	1529	CCAGAGTAAGCAGTCTTTATGGGCTTTCTCTGAGGCCCAGTCACTGCTCC	11	-	57169279-57169328	11q12.1a	Homo sapiens yippee-like 4 (Drosophila) (YPEL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC138324; MGC102723; FLJ30213	MGC138324; MGC102723; FLJ30213
Homo sapiens	RefSeq	XM_934728.1	ILMN_40102	KIAA0565	XM_934728.1	XM_934728.1		9720	89041258	XM_934728.1	KIAA0565	XP_939821.1	ILMN_1714915	0003290612	I	2672	CCTGGTGGCATCTAGTGTCTCCCAGAAAGTGGTTTGTTGAAGTTTTGGAG	17	+	20181844-20181893	17p11.2i-p11.2h	PREDICTED: Homo sapiens KIAA0565 gene product, transcript variant 4 (KIAA0565), mRNA.					
Homo sapiens	RefSeq	NM_006604.1	ILMN_306673	RFPL3	NM_001098535.1	NM_001098535.1		10738	149408134	NM_001098535.1	RFPL3	NP_001092005.1	ILMN_1784654	0002760446	S	839	GAGCTTGGATTCTGGACTGTGAGTTTGAGGGATGGAAGCCGCCTCTCTGC	22	+	31086499-31086548	22q12.3a	Homo sapiens ret finger protein-like 3 (RFPL3), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10508838] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_007124.1	ILMN_181882	UTRN	NM_007124.2	NM_007124.2		7402	110611227	NM_007124.2	UTRN	NP_009055.2	ILMN_1655296	0000840240	S	10292	ACCGCACGACACCAGCACGGATCTCACGGAGGTCATGGAGCAGATTCACA	6	+	144852255-144852304	6q24.2b-q24.2c	Homo sapiens utrophin (UTRN), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 1426262] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 8977119] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8977119] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9288751] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9288751] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8576247] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DRP; DMDL; DRP1; FLJ23678	DRP; DMDL; DRP1; FLJ23678
Homo sapiens	Unigene	Hs.540102	ILMN_104958	HS.540102	Hs.540102		Hs.540102		2221434	AA491872			ILMN_1875223	0002230021	S	52	GTCACAGGAATCTCCTACTGGCTCTCCTGCCTCACCCAGATTTGCCACCA	14	-	21182443-21182492		ne72b09.s1 NCI_CGAP_Ew1 Homo sapiens cDNA clone IMAGE:909785, mRNA sequence					
Homo sapiens	RefSeq	NM_178230.1	ILMN_43403	LOC653505	XM_927767.2	XM_927767.2		653505	113411206	XM_927767.2	LOC653505	XP_932860.1	ILMN_1776260	0004480707	S	454	CGTCGACGGCAAGCCCTTGGGCCGCATCTCCATCAAACTGTTTGCAGACA	1	-	143075446-143075495	1q21.1a	PREDICTED: Homo sapiens similar to cyclophilin-LC (COAS2) (LOC653505), mRNA.					MGC163248; MGC163250; COAS2
Homo sapiens	RefSeq	NM_032226.1	ILMN_21489	ZCCHC7	NM_032226.2	NM_032226.2		84186	110815843	NM_032226.2	ZCCHC7	NP_115602.2	ILMN_1744980	0004900193	S	2492	ACCACTTTTACAGCGGTGTTTCAAGCGGACTGTCACTCAGATCTGCAGAG	9	+	37344782-37344821:37346832-37346841	9p13.2b-p13.2a	Homo sapiens zinc finger, CCHC domain containing 7 (ZCCHC7), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	HSPC086; RP11-397D12.1; FLJ22611; AIR1	HSPC086; RP11-397D12.1; FLJ22611; AIR1
Homo sapiens	RefSeq	NM_178579.1	ILMN_2299	PSMF1	NM_178579.1	NM_178579.1		9491	30581144	NM_178579.1	PSMF1	NP_848694.1	ILMN_2367191	0003290369	A	2991	CTTCCTGGTCAAGCTTATGGTGCTTATTTTGATCTGGGCCACTTCCCTCC	20	+	1095810-1095859	20p13e	Homo sapiens proteasome (prosome, macropain) inhibitor subunit 1 (PI31) (PSMF1), transcript variant 3, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [pmid 10764772] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10764772] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI];  [goid 8539] [pmid 10764772] [evidence NAS]	PI31	PI31
Homo sapiens	RefSeq	NM_002150.2	ILMN_604	HPD	NM_002150.2	NM_002150.2		3242	38016938	NM_002150.2	HPD	NP_002141.1	ILMN_1745688	0000670736	S	1072	CACGCTCTTCCTGGAAGTCATCCAGCGCCACAACCACCAGGGTTTTGGAG	12	-	122277734-122277744:122277838-122277876	12q24.31b	Homo sapiens 4-hydroxyphenylpyruvate dioxygenase (HPD), mRNA.		The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6572] [pmid 7851880] [evidence TAS]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2 [goid 3868] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	4HPPD; GLOD3; PPD; 4-HPPD	4HPPD; GLOD3; PPD; 4-HPPD
Homo sapiens	RefSeq	NM_001741.2	ILMN_22630	CALCA	NM_001741.2	NM_001741.2		796	76880474	NM_001741.2	CALCA	NP_001732.1	ILMN_1702566	0007650386	A	26	AAGCCACCTCCCGCCAGAGAGGTGTCATGGGCTTCCAAAAGTTCTCCCCC	11	-	14992714-14992738:14992739-14992747:14993791-14993806	11p15.2a	Homo sapiens calcitonin-related polypeptide alpha (CALCA), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 18057382] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2408883] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17267696] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IEA]	Attachment of the blastocyst to the uterine lining [goid 7566] [pmid 17983652] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11014233] [evidence IDA]; Any process that initiates the activity of an inactive protein kinase [goid 32147] [pmid 17983652] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity [goid 45762] [pmid 11014233] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity [goid 45762] [pmid 8078488] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [pmid 17241109] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [pmid 8078488] [evidence IDA]; The multiplication or reproduction of endothelial cells, resulting in the expansion of a cell population. Endothelial cells are thin flattened cells which line the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 1935] [pmid 17267696] [evidence IDA]; The process whose specific outcome is the progression of the vasculature over time, from its formation to the mature structure [goid 1944] [pmid 17267696] [evidence IDA]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [pmid 10642343] [evidence IDA]; An increase in the internal diameter of an artery, triggered by vasomotor suppression, during the chemoreceptor response to decreased blood pressure [goid 1984] [evidence IEA]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 1326102] [evidence IDA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 10822112] [evidence IDA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 16014619] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2408883] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of a neurophysiological process [goid 31645] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-1 alpha production [goid 32730] [pmid 16904178] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-8 production [goid 32757] [pmid 16904178] [evidence IDA]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [pmid 17267696] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [pmid 10822112] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [pmid 10822112] [evidence IDA]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [pmid 10642343] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [pmid 10822112] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of vasodilation [goid 45909] [pmid 3266556] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction [goid 45986] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IEA]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within the cytosol of a cell or between the cytosol and its surroundings [goid 51480] [pmid 9685362] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [pmid 9685362] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with a calcitonin receptor [goid 31716] [pmid 8940110] [evidence IPI]; Interacting selectively with a calcitonin receptor [goid 31716] [pmid 8078488] [evidence IPI]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with a calcitonin receptor [goid 31716] [evidence IEA]	CGRP-I; KC; CGRP; CALC1; MGC126648; CT; CGRP1	CGRP-I; KC; CT; CGRP1; CGRP; CALC1; MGC126648
Homo sapiens	RefSeq	XM_927615.1	ILMN_34186	LOC643242	XM_927615.1	XM_927615.1		643242	89034282	XM_927615.1	LOC643242	XP_932708.1	ILMN_1693966	0005090546	S	631	CAGCTACAGCGGAGATGTGCTTCATAACGAGTACATCCTTCCCCCTGGCC	11	-	113197182-113197231		PREDICTED: Homo sapiens similar to interferon stimulated exonuclease gene 20kDa-like 2 (LOC643242), mRNA.					
Homo sapiens	Unigene	Hs.564485	ILMN_117143	HS.564485	Hs.564485		Hs.564485		5540873	AI867857			ILMN_1881284	0001820435	S	37	GCACTGTATGTTGATGGTTCAAAAGTGAGTAACACAATTTCTGCCTTCCC	12	-	10604961-10605010		wb39e07.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2308068 3, mRNA sequence					
Homo sapiens	RefSeq	XM_941065.1	ILMN_28748	NHEDC1	NM_139173.2	NM_139173.2		150159	66793391	NM_139173.2	NHEDC1	NP_631912.2	ILMN_1724931	0003610731	S	1560	ACAGCTCCAAATGGAGCTCTACTTATGGGCATTCTGGGGCCTAAAATGCT	4	-	104041783-104041832	4q24b	Homo sapiens Na+/H+ exchanger domain containing 1 (NHEDC1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]	MGC131641	
Homo sapiens	RefSeq	XM_925973.1	ILMN_28748	NHEDC1	NM_139173.2	NM_139173.2		150159	66793391	NM_139173.2	NHEDC1	NP_631912.2	ILMN_1673417	0000150553	S	1558	TCACAGCTCCAAATGGAGCTCTACTTATGGGCATTCTGGGGCCTAAAATG	4	-	104041785-104041834	4q24b	Homo sapiens Na+/H+ exchanger domain containing 1 (NHEDC1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]	MGC131641	
Homo sapiens	RefSeq	XM_941569.1	ILMN_179350	LOC643668	XR_019339.1	XR_019339.1		643668	113423685	XR_019339.1	LOC643668		ILMN_1721659	0001410333	A	375	TGCCATCGTGTCTACATCTGTGGGCTCAGAACACTACGTCAGCATTCTTT				12p12.3b	PREDICTED: Homo sapiens similar to peptidase (prosome, macropain) 26S subunit, ATPase 1 (LOC643668), mRNA.					
Homo sapiens	RefSeq	XM_941575.1	ILMN_179350	LOC643668	XR_019339.1	XR_019339.1		643668	113423685	XR_019339.1	LOC643668		ILMN_1807492	0006520161	S	410	ACGTCAGCATTCTTTCATTTGTAGACAAGGATCTTCTGGAACCTGGCTGC				12p12.3b	PREDICTED: Homo sapiens similar to peptidase (prosome, macropain) 26S subunit, ATPase 1 (LOC643668), mRNA.					
Homo sapiens	RefSeq	NM_032290.2	ILMN_15362	ANKRD32	NM_032290.2	NM_032290.2		84250	62945411	NM_032290.2	ANKRD32	NP_115666.1	ILMN_2214278	0001070736	S	1676	TGCGTACCTATAAACTTGTAGCTCCTGACTCTTAGGGATGGATTTTGAGG	5	+	94057160-94057209	5q15b	Homo sapiens ankyrin repeat domain 32 (ANKRD32), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]			DKFZp761C121	DKFZp761C121
Homo sapiens	RefSeq	NM_032290.2	ILMN_15362	ANKRD32	NM_032290.2	NM_032290.2		84250	62945411	NM_032290.2	ANKRD32	NP_115666.1	ILMN_1805985	0006380747	S	1221	GGGGTACACACTGAGGCCTTGATGATAACATTGGAAATGATGTGTCGGTC	5	+	94056705-94056754	5q15b	Homo sapiens ankyrin repeat domain 32 (ANKRD32), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]			DKFZp761C121	DKFZp761C121
Homo sapiens	RefSeq	XR_038195.1	ILMN_334322	LOC100130802	XR_038195.1	XR_038195.1		100130802	169161679	XR_038195.1	LOC100130802		ILMN_3252383	0005080241	M	62	GTCCTGTTCCCCAGTGGATTCAGATGAAAACTGGTAATAAAATCAGGTAC				1p22.2a	PREDICTED: Homo sapiens misc_RNA (LOC100130802), miscRNA.					
Homo sapiens	RefSeq	XM_927635.1	ILMN_37863	LOC644508	XM_927635.1	XM_927635.1		644508	89029554	XM_927635.1	LOC644508	XP_932728.1	ILMN_1770823	0001500026	S	1	CTTAGTGAGCAGGTTTATGATTAAAGAAGAAAGACATCGTTGATATATTG	9	-	68416944-68416948:68426221-68426265		PREDICTED: Homo sapiens similar to phosphoglucomutase 5 (LOC644508), mRNA.					
Homo sapiens	RefSeq	NM_006032.2	ILMN_19559	CPNE6	NM_006032.2	NM_006032.2		9362	12545386	NM_006032.2	CPNE6	NP_006023.1	ILMN_1738058	0006840059	S	1882	TCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCC	14	+	23617008-23617057	14q12a	Homo sapiens copine VI (neuronal) (CPNE6), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9645480] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9645480] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9645480] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 9645480] [evidence TAS]	Interacting selectively with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 1786] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9645480] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9645480] [evidence TAS]	N-COPINE	N-COPINE
Homo sapiens	RefSeq	NM_017761.2	ILMN_7879	PNRC2	NM_017761.2	NM_017761.2		55629	20127576	NM_017761.2	PNRC2	NP_060231.1	ILMN_2147306	0000360280	S	2013	GTTTGGTCAAGGGGTAGGTGCAACCCAATGGACCACTTATGCAAAAGATG	1	+	24162164-24162213	1p36.11d	Homo sapiens proline-rich nuclear receptor coactivator 2 (PNRC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		MGC99541; FLJ20312	MGC99541; FLJ20312
Homo sapiens	RefSeq	NM_017761.2	ILMN_7879	PNRC2	NM_017761.2	NM_017761.2		55629	20127576	NM_017761.2	PNRC2	NP_060231.1	ILMN_1778957	0001010202	S	920	CTCGTGTTGTGTGCACTGTGATATAATGGTAGTATCAGTGCAACTTTAAT	1	+	24161071-24161120	1p36.11d	Homo sapiens proline-rich nuclear receptor coactivator 2 (PNRC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		MGC99541; FLJ20312	MGC99541; FLJ20312
Homo sapiens	RefSeq	XM_941161.1	ILMN_41220	LOC651900	XM_941161.1	XM_941161.1		651900	89043094	XM_941161.1	LOC651900	XP_946254.1	ILMN_1693205	0006760465	S	23	ACCTGCAGCGCAAACACGTGACTAAGCATCTTCCTGTCCCGGGCCCTATC					PREDICTED: Homo sapiens hypothetical protein LOC651900 (LOC651900), mRNA.					
Homo sapiens	RefSeq	XM_001128623.2	ILMN_178616	LOC728849	XM_001128623.2	XM_001128623.2		728849	169216548	XM_001128623.2	LOC728849	XP_001128623.2	ILMN_3247993	0000460482	S	3	GTGCATACTCTTACACGACTTACATGAAAGCAAGTTGAATACATTGGTGC	X	-	386283-386309:386402-386424		PREDICTED: Homo sapiens similar to putative DNA dependent ATPase and helicase (LOC728849), mRNA.					
Homo sapiens	RefSeq	NM_001008658.1	ILMN_171892	TUBGCP6	NM_001008658.1	NM_001008658.1		85378	56788361	NM_001008658.1	TUBGCP6	NP_001008658.1	ILMN_1770203	0005130630	I	4801	TACCCGCCACAGGCACTCGGCCCTGATGCCCTCGTGTCCACTTGTGTCCA	22	-	49000576-49000600:49000601-49000625	22q13.33b	Homo sapiens tubulin, gamma complex associated protein 6 (TUBGCP6), transcript variant 2, mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A multiprotein complex composed of gamma-tubulin other non-tubulin proteins that forms a flexible open ring structure thought to be the unit of nucleation at the minus end of a microtubule [goid 8274] [pmid 11694571] [evidence IDA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IEA]	The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [pmid 11694571] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 11694571] [evidence IDA]	GCP6	GCP6
Homo sapiens	RefSeq	NM_175901.3	ILMN_1857	LOC283932	NM_175901.3	NM_175901.3		283932	58331249	NM_175901.3	LOC283932	NP_787097.1	ILMN_1710954	0001660220	S	3451	GTGGTACCGCCAAAATTCAAACCCCAGACTCCCGAACTCATGCTCAGAAC	16	-	30838591-30838640	16p11.2c	Homo sapiens hypothetical protein LOC283932 (LOC283932), mRNA.				MGC125469	MGC125469
Homo sapiens	Unigene	Hs.454935	ILMN_93928	HS.454935	Hs.454935		Hs.454935		29390953	CB529853			ILMN_1902728	0004670253	S	514	AGGAGCATCCACCACCCAGCTTGGGAAAGGACTTGTTATAGAGGGGGTGA	2	-	113317010-113317059		UI-H-FT2-bji-g-12-0-UI.s1 NCI_CGAP_FT2 Homo sapiens cDNA clone UI-H-FT2-bji-g-12-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XR_017898.1	ILMN_162001	LOC401127	XR_017898.1	XR_017898.1		401127	113415561	XR_017898.1	LOC401127		ILMN_3276859	0003360327	M	805	GCAACACTCAAGCTCTGGGACTACAGCAAGGGGAAGTGCCTGAAGACATA	4	+	39159182-39159231	4p14b	PREDICTED: Homo sapiens misc_RNA (LOC401127), miscRNA.					
Homo sapiens	RefSeq	XR_017898.1	ILMN_162001	LOC401127	XR_017898.1	XR_017898.1		401127	113415561	XR_017898.1	LOC401127		ILMN_3200378	0006220537	A	1213	GGGCCTGATTTGAGCCTCCTTTTTGAAGATGATTTGGCCGAGTGTGGACC	4	+	39159590-39159639	4p14b	PREDICTED: Homo sapiens misc_RNA (LOC401127), miscRNA.					
Homo sapiens	RefSeq	XM_926143.1	ILMN_45057	LOC642692	XM_926143.1	XM_926143.1		642692	88954069	XM_926143.1	LOC642692	XP_931236.1	ILMN_1773659	0005550519	S	13	GGACCGGAAACAACCATTGATCCTGGAAAAGACCTGAACACACTGGATGA	2	-	235720553-235720602	2q37.2a	PREDICTED: Homo sapiens hypothetical LOC642692 (LOC642692), mRNA.					
Homo sapiens	RefSeq	NM_019116.1	ILMN_179383	UBFD1	NM_019116.2	NM_019116.2		56061	77917603	NM_019116.2	UBFD1	NP_061989.2	ILMN_1700811	0001090347	S	1148	TGGCCCAGGAGACTGACCCAAAGTGAAGGACATTGCCGGGAGAGGCCTGC	16	+	23489428-23489477	16p12.1c	Homo sapiens ubiquitin family domain containing 1 (UBFD1), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		UBPH; FLJ42145; FLJ38870	
Homo sapiens	RefSeq	NM_024611.4	ILMN_23712	NARG2	NM_024611.4	NM_024611.4		79664	66346702	NM_024611.4	NARG2	NP_078887.2	ILMN_1718830	0002480731	I	403	TGCCTCAGCAAGTTCTGTAGAAAATGAGCCGGCAGTTAGTTCAGCAACTC	15	-	60760450-60760499	15q22.2a	Homo sapiens NMDA receptor regulated 2 (NARG2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			BRCC1	BRCC1
Homo sapiens	RefSeq	NM_006170.2	ILMN_29058	NOP2	NM_001033714.1	NM_001033714.1		4839	76150624	NM_001033714.1	NOP2	NP_001028886.1	ILMN_1723158	0000540221	A	2622	GACGGGTGGCTCACTGCCATTGTCACCAGGTTGGAACTCTTGCCTCTGTG	12	-	6666094-6666143	12p13.31d	Homo sapiens NOP2 nucleolar protein homolog (yeast) (NOP2), transcript variant 2, mRNA.				p120; NOP120; MGC149288; NSUN1; MGC117384; MGC149287	p120; NOP120; MGC149288; NSUN1; MGC117384; MGC149287
Homo sapiens	RefSeq	NM_001033714.1	ILMN_29058	NOP2	NM_001033714.1	NM_001033714.1		4839	76150624	NM_001033714.1	NOP2	NP_001028886.1	ILMN_1666960	0004150224	I	114	TCTAGAGGAAATTGGGGGACGAAGAGTGGCAGCACTGACCTGGTCTGGGA	12	-	6677317-6677366	12p13.31d	Homo sapiens NOP2 nucleolar protein homolog (yeast) (NOP2), transcript variant 2, mRNA.				p120; NOP120; MGC149288; NSUN1; MGC117384; MGC149287	p120; NOP120; MGC149288; NSUN1; MGC117384; MGC149287
Homo sapiens	RefSeq	NM_024592.1	ILMN_17863	SRD5A3	NM_024592.2	NM_024592.2		79644	142350354	NM_024592.2	SRD5A3	NP_078868.1	ILMN_1678435	0006590632	S	1971	CCATTCATCTCCCCCTCAAATCATAGCCTAACAGAACACTTTGAAAGCTC	4	+	55931934-55931983	4q12d	Homo sapiens steroid 5 alpha-reductase 3 (SRD5A3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor [goid 3865] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]	SRD5A2L; FLJ13352	
Homo sapiens	RefSeq	NM_052845.2	ILMN_5798	MMAB	NM_052845.2	NM_052845.2		326625	41053624	NM_052845.2	MMAB	NP_443077.1	ILMN_1689156	0002140291	S	2144	GAGGTGGCTTTGTTCCGTGCCTCCCTGCCCCCATCGTCACTACCAGGTCT	12	-	108477792-108477841	12q24.11b	Homo sapiens methylmalonic aciduria (cobalamin deficiency) cblB type (MMAB), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 9236] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + cob(I)alamin + H2O = phosphate + diphosphate + adenosylcobalamin [goid 8817] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ATR; MGC20496	ATR; MGC20496
Homo sapiens	RefSeq	NM_153449.2	ILMN_23908	SLC2A14	NM_153449.2	NM_153449.2		144195	24475843	NM_153449.2	SLC2A14	NP_703150.1	ILMN_1668865	0003420241	S	1760	CCCAGGACTGCTTCTGAATGCTGCTACTTGATTTCTTTCTCATCCCACGC	12	-	7966782-7966831	12p13.31c	Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 14 (SLC2A14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	GLUT14	GLUT14
Homo sapiens	RefSeq	NM_005523.4	ILMN_3082	HOXA11	NM_005523.5	NM_005523.5		3207	84105266	NM_005523.5	HOXA11	NP_005514.1	ILMN_1738132	0006020364	S	1977	TTCCAGCACCACACTCAGCCCTCATTGGCTCTTGAACTGAGCTTGGAAGC	7	-	27221402-27221451	7p15.2a	Homo sapiens homeobox A11 (HOXA11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IEA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9745033] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX1I; HOX1	HOX1I; HOX1
Homo sapiens	RefSeq	NM_007145.1	ILMN_308913	ZNF146	NM_001099639.1	NM_001099639.1		7705	153791569	NM_001099639.1	ZNF146	NP_001093109.1	ILMN_1699423	0006220528	S	3154	CCCAGAATTGTTGAGGGGGGATCAAGTTGCAGAATGATACAGATAGTACA	19	+	36729088-36729137	19q13.12b	Homo sapiens zinc finger protein 146 (ZNF146), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8665923] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8107129] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8665923] [evidence TAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 8665923] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8665923] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC125661; OZF; MGC125660	MGC125661; OZF; MGC125660
Homo sapiens	RefSeq	NM_032099.1	ILMN_21874	PCDHGB5	NM_018925.2	NM_018925.2		56101	14270503	NM_018925.2	PCDHGB5	NP_061748.1	ILMN_1811103	0006020435	A	2345	GGGCCTTATTTCCACTTTGTAATTCCAGCGAGTCGACTTCCCATCCTGAG	5	+	140760223-140760272	5q31.3c	Homo sapiens protocadherin gamma subfamily B, 5 (PCDHGB5), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-B5	PCDH-GAMMA-B5
Homo sapiens	Unigene	Hs.417262	ILMN_90488	HS.417262	Hs.417262		Hs.417262		27824671	BX091062			ILMN_1906520	0004730162	S	368	TGTTACAGAGCATGGACCAGACCCAGGATGTCAGGGGTTTCCAAGTCAGC	8	+	109571127-109571176		BX091062 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998F221782 ; IMAGE:726549, mRNA sequence					
Homo sapiens	RefSeq	NM_001491.2	ILMN_165919	GCNT2	NM_001491.2	NM_001491.2		2651	30061504	NM_001491.2	GCNT2	NP_001482.1	ILMN_1807970	0007200735	I	573	ATCGATTCCCAGCGTCTCCAACAGGGCAGGAGTGAGTGGAGTATGTTGCA	6	+	10556521-10556570	6p24.2a	Homo sapiens glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) (GCNT2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8449405] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [pmid 8449405] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9134435] [evidence TAS]	Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8109] [pmid 8449405] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC163396; CCAT; GCNT5; bA421M1.1; IGNT; bA360O19.2; NAGCT1; ULG3; GCNT2C; NACGT1; II	MGC163396; CCAT; GCNT5; bA421M1.1; IGNT; bA360O19.2; NAGCT1; ULG3; GCNT2C; NACGT1; II
Homo sapiens	RefSeq	NM_001491.2	ILMN_165919	GCNT2	NM_001491.2	NM_001491.2		2651	30061504	NM_001491.2	GCNT2	NP_001482.1	ILMN_1680390	0006660369	A	4541	AGAGCATAGTGTTTGGGCTAGTGGGTTTCTGACAGCCCATGGGAATGCCC	6	+	10629470-10629519	6p24.2a	Homo sapiens glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) (GCNT2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8449405] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [pmid 8449405] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9134435] [evidence TAS]	Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8109] [pmid 8449405] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC163396; CCAT; GCNT5; bA421M1.1; IGNT; bA360O19.2; NAGCT1; ULG3; GCNT2C; NACGT1; II	MGC163396; CCAT; GCNT5; bA421M1.1; IGNT; bA360O19.2; NAGCT1; ULG3; GCNT2C; NACGT1; II
Homo sapiens	RefSeq	NM_181805.1	ILMN_20895	PKIG	NM_181805.1	NM_181805.1		11142	32483382	NM_181805.1	PKIG	NP_861521.1	ILMN_1796627	0001430445	I	384	CCTGCCAGGAAGTGGAGAGTGGAAATGTGGAATGCCTCACACTCCTCAAC	20	+	42647207-42647256	20q13.12a	Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor gamma (PKIG), transcript variant 1, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [pmid 9218452] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MGC126459; MGC126458	MGC126459; MGC126458
Homo sapiens	RefSeq	XR_015496.2	ILMN_172780	LOC731488	XR_015496.2	XR_015496.2		731488	169168477	XR_015496.2	LOC731488		ILMN_3240475	0006510639	S	398	AGAACTGCGACTCAGCATGCAGAAGGTAAGAGCCTGGACTCGCTCTGGAG					PREDICTED: Homo sapiens hypothetical LOC731488 (LOC731488), mRNA.					
Homo sapiens	RefSeq	XM_935208.1	ILMN_34927	LOC650909	XM_939995.2	XM_939995.2		650909	113427514	XM_939995.2	LOC650909	XP_945088.1	ILMN_1657348	0005420521	I	781	GCTCCAGCTGCACCAGCACCACCGCTGGCCCGCCACTGCGGATGCTGTCC					PREDICTED: Homo sapiens similar to activating signal cointegrator 1 complex subunit 3-like 1 (LOC650909), mRNA.					
Homo sapiens	RefSeq	XM_939995.1	ILMN_34927	LOC650909	XM_939995.2	XM_939995.2		650909	113427514	XM_939995.2	LOC650909	XP_945088.1	ILMN_1695844	0002750564	S	125	GATCTGATAATGCTGGTGAAGGCCAGGCAAGTTCTGTGCTTCCTAACCAG					PREDICTED: Homo sapiens similar to activating signal cointegrator 1 complex subunit 3-like 1 (LOC650909), mRNA.					
Homo sapiens	RefSeq	XM_001715369.1	ILMN_352318	LOC729587	XM_001715369.1	XM_001715369.1		729587	169162888	XM_001715369.1	LOC729587	XP_001715421.1	ILMN_3249001	0007210519	S	340	AGCAGCACCTGGGCCAATGAGGTAGAAGACAGAAGACCACAGTGTACTCC	1	-	16933154-16933203	1p36.13e	PREDICTED: Homo sapiens hypothetical LOC729587 (LOC729587), mRNA.					
Homo sapiens	RefSeq	NM_001080442.1	ILMN_177167	SLC38A8	NM_001080442.1	NM_001080442.1		146167	122937280	NM_001080442.1	SLC38A8	NP_001073911.1	ILMN_2284077	0005810487	I	1205	CAAGAGTCAAGTGCTGCCTGGAGGTCTGGGGAGTGGTCTCTGTGCTGGTC	16	-	84043442-84043482:84046606-84046614	16q23.3b	Homo sapiens solute carrier family 38, member 8 (SLC38A8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]		
Homo sapiens	Unigene	Hs.581028	ILMN_133209	HS.581028	Hs.581028		Hs.581028		82164028	DA778026			ILMN_1853280	0004040603	S	429	GGGGTGGCAGGGGCACTGTATGCGTTGTAGGGCCTGTTTGGGAAGACATT	22	-	26289980-26290029		DA778026 OCBBF2 Homo sapiens cDNA clone OCBBF2012580 5, mRNA sequence					
Homo sapiens	RefSeq	NM_015872.1	ILMN_16012	ZBTB7B	NM_015872.1	NM_015872.1		51043	7705663	NM_015872.1	ZBTB7B	NP_056956.1	ILMN_1736954	0005260315	S	1939	CCGGCATCAGCATCAGCCCTTCCTCCCAGAGCCCTCATTCCAATTCCAAG	1	+	153255891-153255940	1q21.3e	Homo sapiens zinc finger and BTB domain containing 7B (ZBTB7B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [pmid 7937772] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 7937772] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	c-Krox; ZBTB15; hcKrox; DKFZp686G01254; ZFP67	c-Krox; ZBTB15; hcKrox; DKFZp686G01254; ZFP67
Homo sapiens	RefSeq	NM_033281.5	ILMN_4189	MRPS36	NM_033281.5	NM_033281.5		92259	71892471	NM_033281.5	MRPS36	NP_150597.1	ILMN_1807095	0003420079	S	1248	TGGGGCCCCTCCTGTGCCAAGGGTACGTATATTGTGAAGTAAAGCCTCAC	5	+	68525904-68525953	5q13.2a	Homo sapiens mitochondrial ribosomal protein S36 (MRPS36), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [pmid 11279123] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11279123] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11279123] [evidence NAS]	MRP-S36; MGC22896; DC47	MRP-S36; MGC22896; DC47
Homo sapiens	RefSeq	XM_938425.1	ILMN_39359	LOC649351	XM_938425.1	XM_938425.1		649351	88989449	XM_938425.1	LOC649351	XP_943518.1	ILMN_1753780	0004810195	S	229	GTGAAGCCCAAAGTCTTCCACAGCACCCCTATACCAGAGAATGCTGCTCC					PREDICTED: Homo sapiens similar to Prolyl 4-hydroxylase alpha-2 subunit precursor (4-PH alpha-2) (Procollagen-proline,2-oxoglutarate-4-dioxygenase alpha-2 subunit) (LOC649351), mRNA.					
Homo sapiens	RefSeq	NM_080387.4	ILMN_30135	CLEC4D	NM_080387.4	NM_080387.4		338339	37577120	NM_080387.4	CLEC4D	NP_525126.2	ILMN_1808979	0007050519	S	624	GACTTAGAGATGAGAATGCCAAAGGTCAGTGGCGTTGGGTGGACCAGACG	12	+	8564135-8564184	12p13.31b	Homo sapiens C-type lectin domain family 4, member D (CLEC4D), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLEC6; MGC40078; CLECSF8; CLEC-6; MPCL; Mpcl; MCL	CLEC6; MGC40078; CLECSF8; CLEC-6; MPCL; Mpcl; MCL
Homo sapiens	RefSeq	NM_182470.1	ILMN_11776	PKM2	NM_182470.1	NM_182470.1		5315	33286419	NM_182470.1	PKM2	NP_872270.1	ILMN_1775327	0002030093	A	2214	TTTGCAGCCTGCTCTAGTGGGACAGCCCAGAGCCTGGCTGCCCATCATGT	15	-	72491780-72491829	15q23b	Homo sapiens pyruvate kinase, muscle (PKM2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2813362] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2040271] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence NAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 2040271] [evidence EXP]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 2040271] [evidence TAS]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 2854097] [evidence TAS]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 2813362] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12620389] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	OIP3; TCB; PKM; THBP1; MGC3932; PK3; CTHBP	OIP3; TCB; PKM; THBP1; MGC3932; PK3; CTHBP
Homo sapiens	RefSeq	NM_004759.3	ILMN_175667	MAPKAPK2	NM_004759.3	NM_004759.3		9261	32481207	NM_004759.3	MAPKAPK2	NP_004750.1	ILMN_1656144	0002970537	I	1707	GTGAGGCTGCCGTTGTCAGCGTGGACCACTAACCAGCCCGTCTTCTCTCT	1	+	204972367-204972416	1q32.1h	Homo sapiens mitogen-activated protein kinase-activated protein kinase 2 (MAPKAPK2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8280084] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8846784] [evidence EXP]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 8179591] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8179591] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9297626] [evidence EXP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8280084] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8179591] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16278218] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17255097] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17292828] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_020449.1	ILMN_162571	THOC2	NM_001081550.1	NM_001081550.1		57187	125656164	NM_001081550.1	THOC2	NP_001075019.1	ILMN_1696883	0006660377	S	4508	GCCACCGGACTTAACCAAGAGACGTAAAGAGGAGAATGGAACAATGGGGG	X	-	122747401-122747407:122747490-122747532	Xq25b	Homo sapiens THO complex 2 (THOC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CXorf3; dJ506G2.1; THO2	CXorf3; dJ506G2.1; THO2
Homo sapiens	RefSeq	XM_945544.1	ILMN_137054	UBE2Z	XM_945544.1	XM_945544.1		65264	89042800	XM_945544.1	UBE2Z	XP_950637.1	ILMN_1783771	0000650372	A	4105	CCTTGTGTATTTTCACCCCAGCCTGTAGTCCTCCTCACTTCAACCCCAGG				17q21.32c	PREDICTED: Homo sapiens ubiquitin-conjugating enzyme E2Z (putative), transcript variant 3 (UBE2Z), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]		
Homo sapiens	RefSeq	NM_014515.3	ILMN_34694	CNOT2	NM_014515.4	NM_014515.4		4848	89941480	NM_014515.4	CNOT2	NP_055330.1	ILMN_1772651	0004010279	S	1777	GCGTCACCCTGGGCATCTTCACCTTGTCGACCTCAAGACATAGACTTCCA	12	+	69022173-69022215:69022305-69022311	12q15d	Homo sapiens CCR4-NOT transcription complex, subunit 2 (CNOT2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10637334] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of global transcription from Pol II promoter [goid 6358] [pmid 10637334] [evidence NAS]	Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 10637334] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	NOT2; HSPC131; CDC36; NOT2H	NOT2; HSPC131; CDC36; NOT2H
Homo sapiens	RefSeq	XR_041739.1	ILMN_341138	LOC728773	XR_041739.1	XR_041739.1		728773	169164258	XR_041739.1	LOC728773		ILMN_3300789	0005220376	M	1410	GCTGCTGGCTCCACTCCTGCGGTCTACATCATTCCACAGTACAAATATGC				2q22.3b	PREDICTED: Homo sapiens misc_RNA (LOC728773), miscRNA.					
Homo sapiens	RefSeq	NM_016569.3	ILMN_23090	TBX3	NM_005996.3	NM_005996.3		6926	47419904	NM_005996.3	TBX3	NP_005987.3	ILMN_1713449	0007200195	A	4340	CACCAAAATTGGGGAAGGAGTGCCACTTTCCAGCTCCACTTCAAATTCCT	12	-	115108392-115108441	12q24.21a	Homo sapiens T-box 3 (TBX3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11689487] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9207801] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9207801] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12032820] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [pmid 11748239] [evidence IDA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [pmid 11689487] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11689487] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11748239] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 12032820] [evidence IDA]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [pmid 9207801] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9207801] [evidence IDA]; The progression of the limbic system over time from its initial formation until its mature state. The limbic system is a collection of structures in the brain involved in emotion, motivation and emotional aspects of memory [goid 21761] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [pmid 12116211] [evidence IMP]; The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure [goid 30540] [pmid 12116211] [evidence IMP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [pmid 12116211] [evidence IMP]; The regulated release of luteinizing hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary [goid 32275] [pmid 12116211] [evidence IMP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the arm are generated and organized. Morphogenesis pertains to the creation of form. In humans, the arms are the two upper limbs of the body from the shoulder to the hand [goid 35117] [pmid 12116211] [evidence IMP]; The process by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35136] [pmid 9207801] [evidence IDA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [pmid 12116211] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [pmid 9207801] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [pmid 12032820] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [pmid 12032820] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11689487] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 10468588] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; The regulated release of follicle-stimulating hormone, a gonadotropic glycoprotein hormone secreted by the anterior pituitary [goid 46884] [pmid 12116211] [evidence IMP]; The process by which the anatomical structures of the mesoderm are generated and organized. Morphogenesis pertains to the creation of form [goid 48332] [pmid 9207801] [evidence IMP]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9207801] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Any activity that stops or downregulates transcription of genes globally, and is not specific to a particular gene or gene set [goid 16565] [pmid 11689487] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 11689487] [evidence IDA]	UMS; XHL; TBX3-ISO	UMS; XHL; TBX3-ISO
Homo sapiens	Unigene	Hs.38894	ILMN_72535	HS.38894	Hs.38894		Hs.38894		27833988	BX106221			ILMN_1872456	0005310553	S	373	CCTGGCTCTTGTATCCCATGCACAAGACTGCTGGGTGTCCTCCTGTATTC	2	-	215298098-215298147		BX106221 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998F16417, mRNA sequence					
Homo sapiens	RefSeq	XM_932038.1	ILMN_44086	LOC650193	XM_944080.2	XM_944080.2		650193	113425822	XM_944080.2	LOC650193	XP_949173.1	ILMN_1667663	0000380615	S	101	TATGCTGAAGCACTTGTTTATATGAAGGCTTCACTATCCAAATCCTGTCT					PREDICTED: Homo sapiens hypothetical LOC650193 (LOC650193), mRNA.					
Homo sapiens	RefSeq	NM_002423.3	ILMN_9188	MMP7	NM_002423.3	NM_002423.3		4316	75709180	NM_002423.3	MMP7	NP_002414.1	ILMN_1685403	0002350537	S	615	GCTCACTTCGATGAGGATGAACGCTGGACGGATGGTAGCAGTCTAGGGAT	11	-	102394128-102394132:102395667-102395711	11q22.2a	Homo sapiens matrix metallopeptidase 7 (matrilysin, uterine) (MMP7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1497627] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1497627] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 1497627] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MMP-7; PUMP-1; MPSL1	MPSL1; MMP-7; PUMP-1
Homo sapiens	RefSeq	NM_002423.3	ILMN_9188	MMP7	NM_002423.3	NM_002423.3		4316	75709180	NM_002423.3	MMP7	NP_002414.1	ILMN_2192072	0003800088	S	681	GCAACTCATGAACTTGGCCATTCTTTGGGTATGGGACATTCCTCTGATCC	11	-	102394062-102394111	11q22.2a	Homo sapiens matrix metallopeptidase 7 (matrilysin, uterine) (MMP7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1497627] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1497627] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 1497627] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MMP-7; PUMP-1; MPSL1	MPSL1; MMP-7; PUMP-1
Homo sapiens	RefSeq	XR_040313.1	ILMN_350118	CXORF18	XR_040313.1	XR_040313.1		619455	169216892	XR_040313.1	CXorf18		ILMN_3193949	0004920154	A	878	AACAGGACAGCCCCAGCAAACTGGGACAAGTTGGTCACACTATGCATGAG	X	+	140564906-140564955	Xq27.2a	PREDICTED: Homo sapiens chromosome X open reading frame 18 (CXorf18), miscRNA.					
Homo sapiens	RefSeq	XR_042338.1	ILMN_343774	LOC728615	XR_042338.1	XR_042338.1		728615	169161199	XR_042338.1	LOC728615		ILMN_3225490	0002690274	A	205	CCAAGTTGGCAGCTGTTGCTCATAAGCGTCCACCAGGTGGGACAGGGAGT	1	+	220708263-220708312	1q41e	PREDICTED: Homo sapiens misc_RNA (LOC728615), miscRNA.					
Homo sapiens	RefSeq	NM_022338.2	ILMN_27595	C11ORF24	NM_022338.2	NM_022338.2		53838	52851412	NM_022338.2	C11orf24	NP_071733.1	ILMN_1808163	0006110348	S	1934	TTGTAAATGATTCTGTGCCCAGGAGCAGCTGGGGGTTCCACCTCAGGGTG	11	-	67785449-67785498	11q13.2a	Homo sapiens chromosome 11 open reading frame 24 (C11orf24), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DM4E3	DM4E3
Homo sapiens	Unigene	Hs.363526	ILMN_87554	HS.363526	Hs.363526		Hs.363526		21706999	BC034319			ILMN_1846306	0003870025	S	376	AGGAACTTCTTCATGGTCATGGTCACCCAGCTAGAGTGTGGAAGCCAGGC	8	+	33021456-33021505		Homo sapiens cDNA clone IMAGE:4837650					
Homo sapiens	RefSeq	XM_944909.1	ILMN_137611	PTP4A2	XM_944909.1	XM_944909.1		8073	88947646	XM_944909.1	PTP4A2	XP_950002.1	ILMN_1740972	0003840280	I	1694	CCACCACGCCTGGCCTCACCTGGGACTCTTAAGTGATCTATTCAGGGACA				1p35.2a	PREDICTED: Homo sapiens protein tyrosine phosphatase type IVA, member 2, transcript variant 6 (PTP4A2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: prenylated-protein tyrosine phosphate + H2O = prenylated-protein tyrosine + phosphate [goid 4727] [pmid 9514946] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_145904.1	ILMN_6175	HMGA1	NM_145904.1	NM_145904.1		3159	22208976	NM_145904.1	HMGA1	NP_665911.1	ILMN_1673241	0002570608	I	158	CCGCAGCTCAGGACATGGGAGTCCCACCGTATTGTCCAGGCTGGTCTCGA	6	+	34313531-34313541:34315047-34315085	6p21.31e	Homo sapiens high mobility group AT-hook 1 (HMGA1), transcript variant 6, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 10428834] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15479846] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12228227] [evidence EXP]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [pmid 10428834] [evidence NAS]; The controlled breakdown of nucleosomes, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6337] [pmid 10428834] [evidence TAS]; The process leading to expression of genes that are typically not expressed due to silencing by regulatory proteins [goid 6345] [pmid 10428834] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10871404] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10428834] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 15609325] [evidence NAS]; The molecular events that lead to the integration of a viral genome into the host genome [goid 19047] [pmid 16291214] [evidence EXP]; The set of processes involved in the start of virus infection of cells [goid 19059] [pmid 12091904] [evidence EXP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 10428834] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with oligo(A) and oligo(T) tracts of DNA (AT DNA) [goid 3680] [pmid 10428834] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10428834] [evidence IMP];  [goid 30374] [pmid 10428834] [evidence IMP]; Interacting selectively with any of the peroxisome proliferator activated receptors, alpha, beta or gamma [goid 42975] [pmid 10428834] [evidence IDA]; Interacting selectively with a retinoid X receptor [goid 46965] [pmid 10428834] [evidence IDA]	MGC12816; MGC4854; HMG-R; MGC4242; HMGIY	MGC12816; MGC4854; HMG-R; MGC4242; HMGIY
Homo sapiens	RefSeq	XM_001715193.1	ILMN_347960	LOC100132169	XM_001715193.1	XM_001715193.1		100132169	169210172	XM_001715193.1	LOC100132169	XP_001715245.1	ILMN_3245978	0003130373	S	240	CCGAGGCCAAGTGCAGGCCAAGATGCAGGTTACGGATGACCCACCCAGGA	16	+	13075-13085:13222-13247:14246-14258	16p13.3f	PREDICTED: Homo sapiens similar to hCG1742852 (LOC100132169), mRNA.					
Homo sapiens	RefSeq	XM_927287.1	ILMN_37586	LOC644043	XM_927287.1	XM_927287.1		644043	88983870	XM_927287.1	LOC644043	XP_932380.1	ILMN_1716717	0006370452	S	2835	TCCTAGAGTACTTGTACCCCATTCTCAAGTGCACCCTTCTTACCAGGTGG	5	+	70467383-70467432		PREDICTED: Homo sapiens similar to cadherin 12, type 2 preproprotein (LOC644043), mRNA.					
Homo sapiens	RefSeq	NR_003679.1	ILMN_309527	NBLA00301	NR_003679.1	NR_003679.1		79804	153791576	NR_003679.1	NBLA00301		ILMN_3241944	0004780494	S	319	CGAAACCAGTCCTCTCCACCGCCTGGGGATCTTCACTTTCGCAGTCTACG	4	+	174458030-174458079	4q34.1c	Homo sapiens Nbla00301 (NBLA00301), non-coding RNA.				FLJ41674	FLJ41674
Homo sapiens	Unigene	Hs.538491	ILMN_103935	HS.538491	Hs.538491		Hs.538491		24779412	CA416767			ILMN_1835352	0006520240	S	53	GCACAGAACCAGAACTGGAATGGACTACAAACACACACATTTCTCTCTTC	10	+	53873864-53873913		UI-H-FE0-bbv-o-01-0-UI.s1 NCI_CGAP_FE0 Homo sapiens cDNA clone UI-H-FE0-bbv-o-01-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001723658.1	ILMN_349084	LOC100132025	XM_001723658.1	XM_001723658.1		100132025	169208502	XM_001723658.1	LOC100132025	XP_001723710.1	ILMN_3246789	0004390341	S	585	AAGGGCAGATCGCCTTCATCTACTTTGGGACTAAGCTGGTTCAAAGCAGG	15	-	20956423-20956472	15q11.2c	PREDICTED: Homo sapiens hypothetical protein LOC100132025 (LOC100132025), mRNA.					
Homo sapiens	RefSeq	NM_004621.3	ILMN_13843	TRPC6	NM_004621.4	NM_004621.4		7225	142383161	NM_004621.4	TRPC6	NP_004612.2	ILMN_1656410	0004670471	S	4341	GACCATTGGCATTCAGAGGATGCTGGACATTAACTGGAACTGCTACTTCC	11	-	100827726-100827775	11q22.1d	Homo sapiens transient receptor potential cation channel, subfamily C, member 6 (TRPC6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9930701] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [pmid 9930701] [evidence TAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15757897] [evidence IPI];  [goid 15279] [evidence IEA]	FLJ11098; FSGS2; FLJ14863; TRP6	FLJ11098; FSGS2; FLJ14863; TRP6
Homo sapiens	RefSeq	XR_040869.1	ILMN_346939	LOC729852	XR_040869.1	XR_040869.1		729852	169170297	XR_040869.1	LOC729852		ILMN_3303673	0006280678	M	866	CCGAAGTCTGAGCAAGAAGTGGGTGTGAAGTCTCCTCTCTGGTTTGTAGG	7	+	7963683-7963732	7p21.3e	PREDICTED: Homo sapiens misc_RNA (LOC729852), miscRNA.					
Homo sapiens	RefSeq	NM_152290.1	ILMN_25691	C1ORF158	NM_152290.1	NM_152290.1		93190	22748654	NM_152290.1	C1orf158	NP_689503.1	ILMN_1733298	0006100754	S	836	AGCTGGAGACCACAGCATCACTGGACTTGCCAGACAACAAGTGGCGCAGA	1	+	12743506-12743555	1p36.21d	Homo sapiens chromosome 1 open reading frame 158 (C1orf158), mRNA.				RP11-474O21.4; DKFZp686C0236; MGC35194	RP11-474O21.4; DKFZp686C0236; MGC35194
Homo sapiens	RefSeq	NM_004766.1	ILMN_20604	COPB2	NM_004766.1	NM_004766.1		9276	4758031	NM_004766.1	COPB2	NP_004757.1	ILMN_1684385	0000050397	S	2632	GGAAACCTGCTTCTCCTACTCCGGTTATTGTGGCCTCCCACACAGCCAAC	3	-	140559744-140559793	3q23a	Homo sapiens coatomer protein complex, subunit beta 2 (beta prime) (COPB2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8599108] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8533093] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [pmid 8335000] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11030615] [evidence TAS]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11031247] [evidence EXP]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 8335000] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat [goid 48205] [pmid 16956762] [evidence EXP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	beta'-COP	beta'-COP
Homo sapiens	RefSeq	NM_020973.2	ILMN_174102	GBA3	NM_020973.2	NM_020973.2		57733	17933755	NM_020973.2	GBA3	NP_066024.1	ILMN_1664350	0005080670	S	1445	GAAGCACATCTGTAGGCAAGATGGCTGAGAAATACAGGAGAGGCGTCTGC	4	+	22429630-22429644:22429645-22429679	4p15.31a	Homo sapiens glucosidase, beta, acid 3 (cytosolic) (GBA3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound [goid 16139] [pmid 11389701] [evidence IDA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [pmid 11389701] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose [goid 8422] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	MGC104276; GLUC; MGC126878; CBGL1	KLrP; CBGL1; MGC104276; GLUC; MGC126878
Homo sapiens	RefSeq	NM_020973.2	ILMN_174102	GBA3	NM_020973.2	NM_020973.2		57733	17933755	NM_020973.2	GBA3	NP_066024.1	ILMN_2181064	0004900341	S	1856	TCTGATTCCATAAGCTGTTTTTGCTTAGGTGATCCACTGCCATGTGATCC	4	+	22430041-22430090	4p15.31a	Homo sapiens glucosidase, beta, acid 3 (cytosolic) (GBA3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound [goid 16139] [pmid 11389701] [evidence IDA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [pmid 11389701] [evidence IDA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose [goid 8422] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	MGC104276; GLUC; MGC126878; CBGL1	CBGL1; MGC104276; GLUC; MGC126878
Homo sapiens	RefSeq	NM_080668.2	ILMN_3057	CDCA5	NM_080668.2	NM_080668.2		113130	34147481	NM_080668.2	CDCA5	NP_542399.1	ILMN_1683450	0001400673	S	2255	GCCTAGGTGTCCTTGAGCTGAACCGCACTGAAGAACTCTTGTCCTCACTG	11	-	64601683-64601732	11q13.1c	Homo sapiens cell division cycle associated 5 (CDCA5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A protein complex required for sister chromatid cohesion in eukaryotes [goid 8278] [pmid 15837422] [evidence IDA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 15837422] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 15837422] [evidence IDA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [pmid 15837422] [evidence IMP]; The cell cycle process whereby chromosomes are aligned at the metaphase plate, a plane halfway between the poles of the mitotic spindle, during mitosis [goid 7080] [pmid 15837422] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 15837422] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	MGC16386	MGC16386
Homo sapiens	RefSeq	NM_000288.1	ILMN_25066	PEX7	NM_000288.1	NM_000288.1		5191	4505730	NM_000288.1	PEX7	NP_000279.1	ILMN_1729650	0004040017	S	958	GACTTCAGTCTTCAGAGCCCCACTCAGGTGGCTGACTGTTCTTGGGATGA	6	+	137261046-137261072:137276289-137276311	6q23.3c	Homo sapiens peroxisomal biogenesis factor 7 (PEX7), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 9090382] [evidence TAS]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IEA]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol [goid 8611] [pmid 12522768] [evidence IMP]; The chemical reactions and pathways resulting in the formation of ether lipids, lipids that contain (normally) one lipid alcohol in ether linkage to one of the carbon atoms (normally C-1) of glycerol [goid 8611] [pmid 9090383] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 12522768] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a type 2 peroxisome targeting signal, a nonapeptide with a broad consensus sequence of (R/K)-(L/V/I)-(XXXXX)-(H/Q)-(L/A/F) [goid 5053] [pmid 9090381] [evidence IDA]	RCDP1; RD; PTS2R	RCDP1; RD; PTS2R
Homo sapiens	RefSeq	NM_181716.2	ILMN_24427	CENPV	NM_181716.2	NM_181716.2		201161	56118233	NM_181716.2	CENPV	NP_859067.2	ILMN_3246608	0000010722	S	776	GGATGAGGGCACTGTGCGGAGTATGGTCACTGAGGAATTCAATGGCAGCG	17	-	16246186-16246235	17p11.2i	Homo sapiens centromere protein V (CENPV), mRNA.				3110013H01Rik; p30	3110013H01Rik; p30
Homo sapiens	RefSeq	NM_181716.2	ILMN_24427	CENPV	NM_181716.2	NM_181716.2		201161	56118233	NM_181716.2	CENPV	NP_859067.2	ILMN_1729142	0001030026	S	927	CAACTTTGCTCTCCCTGCCGTGCCTCGGTGGTGCTCCTGAATGTGGCTGA	17	-	16246035-16246084	17p11.2i	Homo sapiens centromere protein V (CENPV), mRNA.				3110013H01Rik; p30	3110013H01Rik; p30
Homo sapiens	RefSeq	NM_001098410.1	ILMN_307320	GAGE12H	NM_001098410.1	NM_001098410.1		729442	148491083	NM_001098410.1	GAGE12H	NP_001091880.1	ILMN_3244090	0003390039	S	286	AGAAGGGAGAGGATGAGGGAGCATCTGCAGGTCAAGGGCCGAAGCCTGAA	X	+	49233285-49233320:49236143-49236156	Xp11.23b	Homo sapiens G antigen 12H (GAGE12H), mRNA.				RP11-959H17.7	RP11-959H17.7
Homo sapiens	RefSeq	XM_926277.1	ILMN_31877	LOC642895	XM_926277.1	XM_926277.1		642895	89030931	XM_926277.1	LOC642895	XP_931370.1	ILMN_1658495	0007000201	S	1324	GTGGCCCCTTCACCTCCTTCTAGAACCCTTGGGAAAGAGACACTGCATGG	10	-	43485873-43485922		PREDICTED: Homo sapiens hypothetical protein LOC642895 (LOC642895), mRNA.					
Homo sapiens	RefSeq	NM_003916.3	ILMN_3812	AP1S2	NM_003916.3	NM_003916.3		8905	22027654	NM_003916.3	AP1S2	NP_003907.3	ILMN_1766411	0000940706	S	1686	GTGCTGCACACTTTACAGCAGCTTCCTTTCTTTCCATGGCACTGCCTAGT	X	-	15844476-15844525	Xp22.2	Homo sapiens adaptor-related protein complex 1, sigma 2 subunit (AP1S2), mRNA.	Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15569716] [evidence EXP]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	MGC:1902; SIGMA1B; MRX59; DC22	MGC:1902; SIGMA1B; MRX59; DC22
Homo sapiens	RefSeq	NM_003916.3	ILMN_3812	AP1S2	NM_003916.3	NM_003916.3		8905	22027654	NM_003916.3	AP1S2	NP_003907.3	ILMN_2120273	0001070192	S	1938	GTGATTGTGACCAACATTCAGGCCACGTGAGCACTGTCTTATCACATCGC	X	-	15844224-15844273	Xp22.2	Homo sapiens adaptor-related protein complex 1, sigma 2 subunit (AP1S2), mRNA.	Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15569716] [evidence EXP]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A clathrin coat found on a vesicle of the trans-Golgi network [goid 30130] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	MGC:1902; SIGMA1B; MRX59; DC22	MGC:1902; SIGMA1B; MRX59; DC22
Homo sapiens	RefSeq	NM_000721.2	ILMN_9310	CACNA1E	NM_000721.2	NM_000721.2		777	53832004	NM_000721.2	CACNA1E	NP_000712.2	ILMN_1664047	0007510647	S	9561	CACTGCAGATGCGGTCACCTGACTGACCACCTGGGTTTTCTATTACCAGT	1	+	180037176-180037225	1q25.3b	Homo sapiens calcium channel, voltage-dependent, R type, alpha 1E subunit (CACNA1E), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8825650] [evidence EXP]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 8071363] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8071363] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 8071363] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CACH6; BII; CACNL1A6; Cav2.3	CACH6; BII; CACNL1A6; Cav2.3
Homo sapiens	RefSeq	XM_942096.1	ILMN_163977	LOC730344	XM_001130813.1	XM_001130813.1		730344	113419854	XM_001130813.1	LOC730344	XP_001130813.1	ILMN_1655404	0002630192	A	1675	ACAGTGCCAACCACAAACCTTCAGGCCCTGAAGGACCCCGAGCCTGTGCT					PREDICTED: Homo sapiens hypothetical protein LOC730344 (LOC730344), mRNA.					
Homo sapiens	RefSeq	NM_019591.2	ILMN_3233	ZNF26	NM_019591.2	NM_019591.2		7574	37655174	NM_019591.2	ZNF26	NP_062537.2	ILMN_1691798	0002750133	S	2765	TGGGGTGCTTCCTGTGGTAGTGTCTTTCAGGTATCCGTTCCACTAGCTAC	12	+	132098932-132098981	12q24.33d	Homo sapiens zinc finger protein 26 (ZNF26), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX20; FLJ20755	KOX20; FLJ20755
Homo sapiens	RefSeq	NM_032261.3	ILMN_21763	C21ORF56	NM_032261.3	NM_032261.3		84221	23346426	NM_032261.3	C21orf56	NP_115637.3	ILMN_1716838	0001500390	S	662	AGCGAGTTCCTCATCAACACCTACGGAATCCTGAAGCAGCGGCCCGACCT	21	-	46405871-46405920	21q22.3f	Homo sapiens chromosome 21 open reading frame 56 (C21orf56), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	DKFZp434N0650; MGC99490	DKFZp434N0650; MGC99490
Homo sapiens	Unigene	Hs.565507	ILMN_117972	HS.565507	Hs.565507		Hs.565507		11594322	BF511024			ILMN_1816338	0000450519	S	294	TAAAAGTAAACAAGGCTGTGCATAGTGGCTCATGCCTGTACTTTCGGAGG					UI-H-BI4-apl-e-02-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3087819 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001721137.1	ILMN_338033	FAM87A	XM_001721137.1	XM_001721137.1		157693	169172351	XM_001721137.1	FAM87A	XP_001721189.1	ILMN_3256471	0004390632	M	1813	GAGCAAACTGTTCAGGTCGGCAAGTCACTCTTATCCACTGTTTTGCCTTC				8p23.3b	PREDICTED: Homo sapiens family with sequence similarity 87, member A (FAM87A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_139320.1	ILMN_174680	CHRFAM7A	NM_139320.1	NM_139320.1		89832	23312387	NM_139320.1	CHRFAM7A	NP_647536.1	ILMN_2271884	0005290669	I	542	AAACAACCACCATCGGTTAAATTTGATGCAAAAATATTGCATCTACCAGC	15	-	30675529-30675554:30675555-30675578	15q13.2a	Homo sapiens CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion (CHRFAM7A), transcript variant 1, mRNA.				CHRNA7; MGC120483; CHRNA7-DR1; MGC120482; D-10	CHRNA7; MGC120483; CHRNA7-DR1; MGC120482; D-10
Homo sapiens	RefSeq	NM_139320.1	ILMN_174680	CHRFAM7A	NM_139320.1	NM_139320.1		89832	23312387	NM_139320.1	CHRFAM7A	NP_647536.1	ILMN_2367157	0002940678	A	621	TTGTGGATAGCTGCAAACTGCGATATTGCTGATGAGCGCTTTGACGCCAC	15	-	30669288-30669312:30672556-30672580	15q13.2a	Homo sapiens CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion (CHRFAM7A), transcript variant 1, mRNA.				CHRNA7; MGC120483; CHRNA7-DR1; MGC120482; D-10	CHRNA7; MGC120483; CHRNA7-DR1; MGC120482; D-10
Homo sapiens	RefSeq	NM_005603.2	ILMN_176842	ATP8B1	NM_005603.3	NM_005603.3		5205	115527112	NM_005603.3	ATP8B1	NP_005594.1	ILMN_1710523	0006040240	S	3528	TAAGATCCAGAAGCATCGCAAGCGGTTGAAGGCGGAGGAGCAGTGGCAGC	18	-	55315898-55315944:55317599-55317601	18q21.31b	Homo sapiens ATPase, class I, type 8B, member 1 (ATP8B1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11682026] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 12880872] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 11682026] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IEA]; The directed movement of bile acid and bile salts into, out of, within or between cells [goid 15721] [pmid 12880872] [evidence NAS]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 16628629] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [pmid 12880872] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12880872] [evidence RCA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 9500542] [evidence RCA]	FIC1; PFIC1; PFIC; ATPIC; BRIC	FIC1; PFIC1; PFIC; ATPIC; BRIC
Homo sapiens	RefSeq	NM_001130404.1	ILMN_365979	PRR20B	NM_001130404.1	NM_001130404.1		729233	194353948	NM_001130404.1	PRR20B	NP_001123876.1	ILMN_3245936	0000610228	S	103	CTACCTCAGAGCTACAGCGGTGAACCTGTGGACACCTCCGACTCCTCGGG	13	+	57721724-57721773	13q21.1d	Homo sapiens proline rich 20B (PRR20B), mRNA.					
Homo sapiens	RefSeq	XR_015890.2	ILMN_182506	LOC728900	XR_015890.2	XR_015890.2		728900	169211160	XR_015890.2	LOC728900		ILMN_3236794	0005550358	S	2	AGTGTCCAATCCGAGAGCGGCAAAGACGAGCCTCGAAGTCCGCCGGCCAA	17	-	115055-115104		PREDICTED: Homo sapiens misc_RNA (LOC728900), miscRNA.					
Homo sapiens	RefSeq	NR_024586.1	ILMN_371751	LOC100216545	NR_024586.1	NR_024586.1		100216545	218082922	NR_024586.1	LOC100216545		ILMN_3247329	0004570056	S	3482	CTGGGGACCACAGGCTTTCTGAGCTCAATAAAAATACTAAGCTTGGTACT	7	-	104651057-104651106		Homo sapiens hypothetical LOC100216545 (LOC100216545), non-coding RNA.					
Homo sapiens	RefSeq	XM_926124.1	ILMN_40773	LOC642671	XM_926124.1	XM_926124.1		642671	89057783	XM_926124.1	LOC642671	XP_931217.1	ILMN_1661013	0001400129	S	181	TCCCTGAGATTAGAAGCTAGCTATTCAATCTAGGTGAACATGCCATTTTG	20	-	1265319-1265330:1265331-1265368		PREDICTED: Homo sapiens hypothetical protein LOC642671 (LOC642671), mRNA.					
Homo sapiens	RefSeq	NM_145322.1	ILMN_17380	OSBPL3	NM_145322.1	NM_145322.1		26031	21735583	NM_145322.1	OSBPL3	NP_663162.1	ILMN_2328378	0006040181	A	5818	GGGCTTCAAGCACTGTCTTCCATCTGCATCTTCCAGATTTATCATGAGTG	7	-	24838890-24838939	7p15.3a-p15.2c	Homo sapiens oxysterol binding protein-like 3 (OSBPL3), transcript variant 4, mRNA.		The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC21526; DKFZp667P1518; ORP3; OSBP3; KIAA0704; ORP-3	MGC21526; DKFZp667P1518; ORP3; OSBP3; KIAA0704; ORP-3
Homo sapiens	RefSeq	NM_144580.1	ILMN_23607	C1ORF85	NM_144580.1	NM_144580.1		112770	24307870	NM_144580.1	C1orf85	NP_653181.1	ILMN_1698243	0002640086	S	1439	GGGACAGGGCTATTGATAAGGTCCCCTTGGTGTTGCCTTCTTGCATCTCC	1	-	156262580-156262629	1q22d	Homo sapiens chromosome 1 open reading frame 85 (C1orf85), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			NCU-G1; MGC31963; RP11-443G18.2	NCU-G1; MGC31963; RP11-443G18.2
Homo sapiens	RefSeq	NM_017830.1	ILMN_27199	OCIAD1	NM_017830.1	NM_017830.1		54940	8923426	NM_017830.1	OCIAD1	NP_060300.1	ILMN_1799604	0006580239	S	945	GCTTCATCTAGGTGGTCATGATTACCTGCATGCTTTGAGCTCAGCAGCAG	4	+	48557576-48557625	4p12a	Homo sapiens OCIA domain containing 1 (OCIAD1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			TPA018; MGC111072; FLJ20455; Asrij; OCIA	TPA018; MGC111072; FLJ20455; Asrij; OCIA
Homo sapiens	RefSeq	NM_001011540.1	ILMN_3790	KU-MEL-3	NM_001011540.1	NM_001011540.1		497048	58372159	NM_001011540.1	KU-MEL-3	NP_001011540.1	ILMN_1704916	0003390463	S	829	CCTGCCTGTTGTCCACGTGGCTGCAGCAAGCAAACATGGGTTTTCCTTGG	6	+	4556838-4556887	6p25.1c	Homo sapiens KU-MEL-3 protein (KU-MEL-3), mRNA.					
Homo sapiens	RefSeq	NM_003387.3	ILMN_3660	WASPIP	NM_003387.3	NM_003387.3		7456	38373694	NM_003387.3	WASPIP	NP_003378.3	ILMN_1668417	0005700670	S	3813	GGCAGGTACCGTTCTAAATCTGAAACAGGGTGATAGCTCAAAGTTGCCAT	2	-	175133267-175133316	2q31.1g	Homo sapiens Wiskott-Aldrich syndrome protein interacting protein (WASPIP), mRNA.				WIP; PRPL-2	WIP; PRPL-2
Homo sapiens	RefSeq	NM_021643.1	ILMN_163335	TRIB2	NM_021643.1	NM_021643.1		28951	11056053	NM_021643.1	TRIB2	NP_067675.1	ILMN_1714700	0002570328	S	3887	GTCCTCACGTTCCCAGGAGGGCGGCTTCACCCTTCGTAACCAGGAGACAA	2	+	12800000-12800049	2p25.1a-p24.3d	Homo sapiens tribbles homolog 2 (Drosophila) (TRIB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; Any process that modulates the frequency, rate or extent of MAP kinase activity [goid 43405] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence ISS]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence ISS]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	TRB2; GS3955	TRB2; GS3955
Homo sapiens	RefSeq	NM_152729.2	ILMN_168245	NT5DC1	NM_152729.2	NM_152729.2		221294	38570155	NM_152729.2	NT5DC1	NP_689942.2	ILMN_2058347	0000290646	S	2774	CCTGGATTGAAGTGCAGAATTTGGCATATCGATGCATGCAATGGAAAGAA	6	+	116565874-116565923	6q22.1d	Homo sapiens 5'-nucleotidase domain containing 1 (NT5DC1), mRNA.			Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC131837; C6orf200; MGC24302; LP2642; NT5C2L1	MGC131837; C6orf200; MGC24302; LP2642; NT5C2L1
Homo sapiens	RefSeq	XM_001724246.1	ILMN_342032	LOC100128406	XM_001724246.1	XM_001724246.1		100128406	169163007	XM_001724246.1	LOC100128406	XP_001724298.1	ILMN_3261122	0001770427	M	859	GCCGTGTGAATTTATGGTTATTCAGGAAGAGGTGGGTAGGTTGAGATGGG	2	-	132805887-132805936	2q21.2a	PREDICTED: Homo sapiens similar to AML-associated zinc finger protein (LOC100128406), mRNA.					
Homo sapiens	RefSeq	NM_173362.2	ILMN_174243	RFESD	NM_173362.2	NM_173362.2		317671	40255164	NM_173362.2	RFESD	NP_775498.1	ILMN_2100458	0006100278	S	1588	GGGAGATATAGAGGATTTTGATGGACGACCGTGTATAGTTTGCCCCTGGC	5	+	95015814-95015827:95017506-95017541	5q15c	Homo sapiens Rieske (Fe-S) domain containing (RFESD), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]		
Homo sapiens	RefSeq	NM_033550.3	ILMN_20784	TP53RK	NM_033550.3	NM_033550.3		112858	41327714	NM_033550.3	TP53RK	NP_291028.3	ILMN_1764851	0002320037	S	2998	GGCTAGTACCTGCTTTGTTGGGGTATGGTTGGCTCGTGTGCATTAAGTCA	20	-	45313329-45313378	20q13.12c	Homo sapiens TP53 regulating kinase (TP53RK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11546806] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 11546806] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with one of the p53 family of proteins [goid 2039] [pmid 11546806] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11546806] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11546806] [evidence IC ]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	BUD32; PRPK; Nori-2p; Nori-2; C20orf64; dJ101A2	BUD32; PRPK; Nori-2p; Nori-2; C20orf64; dJ101A2
Homo sapiens	RefSeq	NM_000809.2	ILMN_23723	GABRA4	NM_000809.2	NM_000809.2		2557	34452722	NM_000809.2	GABRA4	NP_000800.2	ILMN_1801408	0001410014	S	7835	GCTAGTGATTATTGCTTGTAGTCCCACCCCCTTCCCCACATTAGCCTTAG	4	-	46924161-46924210	4p12b	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, alpha 4 (GABRA4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8719416] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [pmid 8719416] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity [goid 8503] [pmid 8719416] [evidence TAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Homo sapiens	RefSeq	NM_000575.3	ILMN_25320	IL1A	NM_000575.3	NM_000575.3		3552	27894329	NM_000575.3	IL1A	NP_000566.3	ILMN_1658483	0001980672	S	2536	CAGGGCATTTTGGTCCAAGTTGTGCTTATCCCATAGCCAGGAAACTCTGC	2	-	113531834-113531883	2q13d	Homo sapiens interleukin 1, alpha (IL1A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1924307] [evidence TAS]	A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 1924307] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10748004] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 6209582] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 3493774] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10861041] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10748004] [evidence TAS]; Interacting selectively with the interleukin-1 receptor [goid 5149] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18329368] [evidence IPI]	IL1F1; IL1-ALPHA; IL1; IL-1A	IL1F1; IL1-ALPHA; IL1; IL-1A
Homo sapiens	RefSeq	NM_015386.1	ILMN_28901	COG4	NM_015386.2	NM_015386.2		25839	118498353	NM_015386.2	COG4	NP_056201.2	ILMN_1703683	0002710546	S	2507	GGCAGCAGAGAAACAAAGTCTGGACCCACTCCATGCTCTGCCCTCAGACC	16	-	70514737-70514786	16q22.1f	Homo sapiens component of oligomeric golgi complex 4 (COG4), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p) [goid 17119] [pmid 15047703] [evidence IDA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15047703] [evidence IPI]	COD1; DKFZp586E1519	COD1; DKFZp586E1519
Homo sapiens	RefSeq	NR_002447.1	ILMN_20573	SNORD24	NR_002447.1	NR_002447.1		26820	72255552	NR_002447.1	SNORD24		ILMN_3237251	0003170753	S	25	GCTATCTGAGAGATGGTGATGACATTTTAAACCACCAAGATCGCTGATGC	9	+	135206096-135206145	9q34.2a	Homo sapiens small nucleolar RNA, C/D box 24 (SNORD24), small nucleolar RNA.				RNU24; U24	RNU24; U24
Homo sapiens	RefSeq	NM_001013657.1	ILMN_165403	C15ORF58	NM_001013657.2	NM_001013657.2		390637	116642894	NM_001013657.2	C15orf58	NP_001013679.2	ILMN_1810855	0002630452	S	1291	ACGTACAGGCAGCACTGGTGGCCCTGATGTCCCAGGAAGAGCAATAATAC	15	+	88586256-88586302:88586303-88586305	15q26.1b	Homo sapiens chromosome 15 open reading frame 58 (C15orf58), mRNA.			Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]		
Homo sapiens	RefSeq	Hs.56782	ILMN_29175	LHFPL4	NM_198560.2	NM_198560.2		375323	108773811	NM_198560.2	LHFPL4	NP_940962.1	ILMN_1841495	0004120093	S	4461	GAGCATCCTGCTTGGGCACACGGGGAATAACCTTTCTCCAGCTTCCAGTG	3	-	9541106-9541155	3p25.3c	Homo sapiens lipoma HMGIC fusion partner-like 4 (LHFPL4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC133162	
Homo sapiens	RefSeq	NR_029611.1	ILMN_388192	MIR181A2	NR_029611.1	NR_029611.1		406954	262206226	NR_029611.1	MIR181A2		ILMN_3309659	0006130209	S	47	CGCTGTCGGTGAGTTTGGGATTTGAAAAAACCACTGACCGTTGACTGTAC				9q33.3a	Homo sapiens microRNA 181a-2 (MIR181A2), microRNA.					
Homo sapiens	RefSeq	XM_940291.1	ILMN_38190	LOC651167	XM_940291.1	XM_940291.1		651167	89066535	XM_940291.1	LOC651167	XP_945384.1	ILMN_1754210	0002490762	S	3	GTATTTAGAATATGTAACAGCAAGTGGCAGGAGACTATTTGGAGTTTTCC					PREDICTED: Homo sapiens similar to transmembrane phosphatase with tensin homology isoform alpha (LOC651167), mRNA.					
Homo sapiens	RefSeq	XM_934590.1	ILMN_171940	LOC729238	XM_001133039.1	XM_001133039.1		729238	113421579	XM_001133039.1	LOC729238	XP_001133039.1	ILMN_1680449	0002760053	I	573	CCAGGGTAACATAGTGAGGCACTGAAAGAAAGGAGACTGCACTGGAGCCC	10	-	80989537-80989586	10q22.3e	PREDICTED: Homo sapiens similar to Pulmonary surfactant-associated protein A2 precursor (SP-A2) (SP-A) (PSP-A) (PSPA) (Alveolar proteinosis protein) (35 kDa pulmonary surfactant-associated protein), transcript variant 4 (LOC729238), mRNA.					
Homo sapiens	RefSeq	NM_017581.2	ILMN_18306	CHRNA9	NM_017581.2	NM_017581.2		55584	70995129	NM_017581.2	CHRNA9	NP_060051.2	ILMN_1728501	0001690474	S	1344	CCAAGGGGAGTGAATGGAAGAAGGTGGCGAAAGTCATAGACCGATTCTTC	4	+	40051182-40051231	4p14a	Homo sapiens cholinergic receptor, nicotinic, alpha 9 (CHRNA9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	 [goid 4889] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	HSA243342; MGC142135; NACHRA9; MGC142109	HSA243342; MGC142135; NACHRA9; MGC142109
Homo sapiens	RefSeq	NM_017581.2	ILMN_18306	CHRNA9	NM_017581.2	NM_017581.2		55584	70995129	NM_017581.2	CHRNA9	NP_060051.2	ILMN_2069286	0000610020	S	1666	TAGGGAAAGAGCCCTTTTATAGCCCACCGTAGTGGTGGGTGACTGGCCTC	4	+	40051504-40051553	4p14a	Homo sapiens cholinergic receptor, nicotinic, alpha 9 (CHRNA9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	 [goid 4889] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	HSA243342; MGC142135; NACHRA9; MGC142109	HSA243342; MGC142135; NACHRA9; MGC142109
Homo sapiens	Unigene	Hs.574491	ILMN_126672	HS.574491	Hs.574491		Hs.574491		83060268	DB027317			ILMN_1886639	0004810746	S	19	GCCAGGCTGCCCAAGGCCACAGTGAGCATCAGATAAGGGAGAACTATTCC	19	-	57426290-57426339		DB027317 TESTI2 Homo sapiens cDNA clone TESTI2009775 5, mRNA sequence					
Homo sapiens	RefSeq	XM_942608.1	ILMN_169616	LOC645291	XR_019575.1	XR_019575.1		645291	113412108	XR_019575.1	LOC645291		ILMN_1696246	0004220500	S	2533	GTATTTGTTTATTGTAAACGTAGACATTTAGCATTCACTGCAGTTTTCAA				1p31.3a	PREDICTED: Homo sapiens misc_RNA (LOC645291), miscRNA.					
Homo sapiens	RefSeq	NR_024233.1	ILMN_371338	NCRNA00167	NR_024233.1	NR_024233.1		440072	209862752	NR_024233.1	NCRNA00167		ILMN_3244888	0007550711	S	2414	GCAAAAGCTGCCACTCCACATACCCCTGGCCTCAGTAAGAACGGCTCACT	11	+	129874932-129874981	11q24.3c	Homo sapiens non-protein coding RNA 167 (NCRNA00167), non-coding RNA.					
Homo sapiens	RefSeq	XM_928189.1	ILMN_36806	LOC653577	XM_928189.1	XM_928189.1		653577	89041280	XM_928189.1	LOC653577	XP_933282.1	ILMN_1730780	0000630347	S	822	AGGGTTTTACTTGCTGCCACTCTTTGTTTTTTCTCTCAATTATCTGGTCC	17	+	18684235-18684284		PREDICTED: Homo sapiens similar to hypothetical protein FLJ36492 (LOC653577), mRNA.					
Homo sapiens	RefSeq	XM_001126176.2	ILMN_178069	NACAD	XM_001126176.2	XM_001126176.2		23148	169172257	XM_001126176.2	NACAD	XP_001126176.2	ILMN_3305973	0006450246	M	4649	CCAAGATTGAGGACCTGTCCCAGCAAGTGCACAAAGCCGCAGCTGAGAAG				7p13c	PREDICTED: Homo sapiens NAC alpha domain containing (NACAD), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]			
Homo sapiens	RefSeq	NM_144962.1	ILMN_24098	PEBP4	NM_144962.2	NM_144962.2		157310	116812621	NM_144962.2	PEBP4	NP_659399.2	ILMN_1734472	0006660437	S	300	AAGATCACCTCCTGGATGGAGCCGATAGTCAAGTTCCCGGGGGCCGTGGA	8	-	22833642-22833691	8p21.3a	Homo sapiens phosphatidylethanolamine-binding protein 4 (PEBP4), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]			CORK-1; CORK1; GWTM1933; MGC22776; PRO4408	CORK-1; CORK1; GWTM1933; MGC22776; PRO4408
Homo sapiens	RefSeq	XM_932180.1	ILMN_41555	LOC644424	XM_932180.1	XM_932180.1		644424	88943015	XM_932180.1	LOC644424	XP_937273.1	ILMN_1773121	0006420433	S	2868	CCAAACTACTTGAGAGGATGAGGCAGGAGGATCACTTGAGGAGCTCAGAA	1	-	141744911-141744960		PREDICTED: Homo sapiens hypothetical protein LOC644424 (LOC644424), mRNA.					
Homo sapiens	RefSeq	NM_001004470.1	ILMN_19943	ST8SIA6	NM_001004470.1	NM_001004470.1		338596	54234056	NM_001004470.1	ST8SIA6	NP_001004470.1	ILMN_1698508	0007200068	S	790	GCATTTTTTCTTCTGCCAGCATTTTCCTTCAGGGCCAACACGGGTACCTC	10	-	17409104-17409131:17413413-17413434	10p12.33c	Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 (ST8SIA6), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [evidence IEA]	SIAT8F; ST8Sia VI; ST8SIA-VI	SIAT8F; ST8Sia VI; ST8SIA-VI
Homo sapiens	RefSeq	XM_939896.1	ILMN_38068	RBM	XM_939896.2	XM_939896.2		650805	113430739	XM_939896.2	RBM	XP_944989.2	ILMN_1775851	0001300014	S	1350	GCACCATCTGCAGGAGTGCCTCTGTTGTCTTATGGTGGAAGCAGCCACCA					PREDICTED: Homo sapiens similar to RNA binding motif protein, Y chromosome, family 2 member B (RBM), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	XM_089866.3	ILMN_9347	LOC136157	XM_069743.3	XM_069743.3		136157	37538755	XM_069743.3	LOC136157	XP_069743.3	ILMN_1815905	0000630561	S	371	GTTCCAGAGAACAGCAGACCTTTCAGCCTGTGCACGTGATCAACATGGAC	7	+	123904031-123904080	7q31.33a	PREDICTED: Homo sapiens similar to Ssu72 RNA polymerase II CTD phosphatase homolog (LOC136157), mRNA.					
Homo sapiens	RefSeq	XM_374648.1	ILMN_9347	LOC136157	XM_069743.3	XM_069743.3		136157	37538755	XM_069743.3	LOC136157	XP_069743.3	ILMN_1744919	0003310300	S	108	CGGAACTGAATCTCATGTGAGGCTACCAGGACGAAGACCCAATCATCCTG	7	+	123903768-123903817	7q31.33a	PREDICTED: Homo sapiens similar to Ssu72 RNA polymerase II CTD phosphatase homolog (LOC136157), mRNA.					
Homo sapiens	RefSeq	XM_069743.3	ILMN_9347	LOC136157	XM_069743.3	XM_069743.3		136157	37538755	XM_069743.3	LOC136157	XP_069743.3	ILMN_1659395	0007570048	A	260	GAAATGAGAGAATCAAGCCTGGCCCAGAAAGATTTCAGGAATGCACTGAA	7	+	123903920-123903969	7q31.33a	PREDICTED: Homo sapiens similar to Ssu72 RNA polymerase II CTD phosphatase homolog (LOC136157), mRNA.					
Homo sapiens	RefSeq	NM_002958.3	ILMN_14452	RYK	NM_002958.3	NM_002958.3		6259	116805328	NM_002958.3	RYK	NP_002949.2	ILMN_2363439	0000770372	A	1732	CCCTTCGAGATGGCCGCATACCTGAAAGATGGTTACCGAATAGCCCAGCC	3	-	135360789-135360838	3q22.1e	Homo sapiens RYK receptor-like tyrosine kinase (RYK), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8386829] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8726462] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8386829] [evidence TAS]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 8386829] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with Wnt-protein, a secreted growth factor involved in signaling [goid 17147] [evidence IEA]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [evidence IEA]	JTK5; RYK1; D3S3195; JTK5A	JTK5; RYK1; D3S3195; JTK5A
Homo sapiens	RefSeq	NM_002125.3	ILMN_3178	HLA-DRB5	NM_002125.3	NM_002125.3		3127	26665892	NM_002125.3	HLA-DRB5	NP_002116.2	ILMN_1697499	0006370315	S	876	GGCTCTTATTCTTCCACAAGAGAGGACTTTCTCAGGCCCTGGTTGCTACC	6	-	32593374-32593423	6p21.32b	Homo sapiens major histocompatibility complex, class II, DR beta 5 (HLA-DRB5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		HLA-DRB1	HLA-DRB1
Homo sapiens	RefSeq	NR_000019.1	ILMN_2130	SNORD34	NR_000019.1	NR_000019.1		26817	22546015	NR_000019.1	SNORD34		ILMN_2165762	0003780050	S	11	GTTCCGCAACTACCTACATTGTTTGATCCTCATGAAAGCAGCACTGGCTG	19	+	49994174-49994223	19q13.33b	Homo sapiens small nucleolar RNA, C/D box 34 (SNORD34), small nucleolar RNA.				U34; RNU34	U34; RNU34
Homo sapiens	RefSeq	NM_001002848.1	ILMN_25735	LY6G5C	NM_001002848.1	NM_001002848.1		80741	50845400	NM_001002848.1	LY6G5C	NP_001002848.1	ILMN_1770209	0006480730	I	173	TTCAGGCCCACTGAGCCGCAGCTGAGCACAGGCGGGGCAGGAAAAAGGAT	6	-	31756988-31757024:31757025-31757037	6p21.33a	Homo sapiens lymphocyte antigen 6 complex, locus G5C (LY6G5C), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			C6orf20; LY6G5CA; G5c; LY6G5CB; NG33	C6orf20; LY6G5CA; G5c; NG33; LY6G5CB
Homo sapiens	RefSeq	NM_024967.1	ILMN_9913	ZNF556	NM_024967.1	NM_024967.1		80032	13376459	NM_024967.1	ZNF556	NP_079243.1	ILMN_1704441	0002760750	S	1267	GGGGAGAAACCTGTAAATGCAGCCAGTGTGGGAAAACCTTCAGGCGGGCT	19	+	2829136-2829185	19p13.3f	Homo sapiens zinc finger protein 556 (ZNF556), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ11637	FLJ11637
Homo sapiens	RefSeq	NM_030959.2	ILMN_181595	OR12D3	NM_030959.2	NM_030959.2		81797	31377669	NM_030959.2	OR12D3	NP_112221.1	ILMN_2129831	0001190280	S	1729	CCCATTAAGCCAATGTGACAAGCTCTTTGTTTCAGTTGGAGTGTTTGCAC	6	-	29449269-29449318	6p22.1a	Homo sapiens olfactory receptor, family 12, subfamily D, member 3 (OR12D3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	MGC119267; hs6M1-27; MGC125888	MGC119267; hs6M1-27; MGC125888
Homo sapiens	RefSeq	NM_030959.2	ILMN_181595	OR12D3	NM_030959.2	NM_030959.2		81797	31377669	NM_030959.2	OR12D3	NP_112221.1	ILMN_1703197	0005560753	S	1203	GTGGCAAGGAGAACTAAGGAGGTAGGAAGTATGGGGAGGGTTAGAGTAGG	6	-	29449795-29449844	6p22.1a	Homo sapiens olfactory receptor, family 12, subfamily D, member 3 (OR12D3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	MGC119267; hs6M1-27; MGC125888	MGC119267; hs6M1-27; MGC125888
Homo sapiens	RefSeq	NM_001098672.1	ILMN_307381	HEPHL1	NM_001098672.1	NM_001098672.1		341208	148886706	NM_001098672.1	HEPHL1	NP_001092142.1	ILMN_3241132	0005050136	S	5769	GTCCCTGCTCCTAGCAGGACAGTCTCTTCATTTGACTTTGGGTCTCATTG	11	+	93486840-93486889	11q21a-q21b	Homo sapiens hephaestin-like 1 (HEPHL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686F22190	DKFZp686F22190
Homo sapiens	RefSeq	XM_001714911.1	ILMN_340101	LOC728767	XM_001714911.1	XM_001714911.1		728767	169205731	XM_001714911.1	LOC728767	XP_001714963.1	ILMN_3239677	0001990711	S	128	CAAAACAAGGAGCCAGTGCCAGGCTGTCGGCTTCTGGGTCAAGGTCCCCA	13	+	109232254-109232303	13q34a	PREDICTED: Homo sapiens hypothetical LOC728767 (LOC728767), mRNA.					
Homo sapiens	RefSeq	NM_001002235.1	ILMN_913	SERPINA1	NM_001002235.1	NM_001002235.1		5265	50363220	NM_001002235.1	SERPINA1	NP_001002235.1	ILMN_2404154	0006380484	A	1440	ACAAAATACCAAGTCTCCCCTCTTCATGGGAAAAGTGGTGAATCCCACCC	14	-	93914546-93914595	14q32.13a	Homo sapiens serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 (SERPINA1), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 59727] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16192646] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 59727] [evidence EXP]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 12878203] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16192646] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15845869] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12878203] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PI1; MGC23330; PRO2275; A1AT; AAT; MGC9222; PI; A1A	PI1; MGC23330; PRO2275; A1AT; AAT; MGC9222; PI; A1A
Homo sapiens	RefSeq	NM_004079.3	ILMN_178498	CTSS	NM_004079.3	NM_004079.3		1520	23110961	NM_004079.3	CTSS	NP_004070.3	ILMN_1743032	0006330484	S	3691	GACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCC	1	-	150702910-150702959	1q21.2c	Homo sapiens cathepsin S (CTSS), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1373132] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8157683] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 1373132] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC3886	MGC3886
Homo sapiens	RefSeq	NR_030277.1	ILMN_387980	MIR551A	NR_030277.1	NR_030277.1		693135	262205735	NR_030277.1	MIR551A		ILMN_3310668	0000380184	S	45	TCTGACCGTTTCTAGGCGACCCACTCTTGGTTTCCAGGGTTGCCCTGGAA				1p36.32b	Homo sapiens microRNA 551a (MIR551A), microRNA.					
Homo sapiens	RefSeq	XM_001716866.1	ILMN_345794	LOC729983	XM_001716866.1	XM_001716866.1		729983	169179758	XM_001716866.1	LOC729983	XP_001716918.1	ILMN_3226514	0002570392	A	1305	AGCAGAAGTGTCCCCGGTTGAGAATCTGTCCCAGAGGAACACGACCACGA				9p21.3c	PREDICTED: Homo sapiens hypothetical LOC729983 (LOC729983), mRNA.					
Homo sapiens	RefSeq	NR_024491.1	ILMN_370178	LOC100128573	NR_024491.1	NR_024491.1		100128573	213513106	NR_024491.1	LOC100128573		ILMN_3237079	0004570452	S	209	TACTCATGGCCAAGCTGCCTCTCACCCCAGATGGAGGAAGTGAAAGTTCC	19	-	7537989-7538038	19p13.2e	Homo sapiens hypothetical LOC100128573 (LOC100128573), non-coding RNA.					
Homo sapiens	RefSeq	NM_006809.4	ILMN_23426	TOMM34	NM_006809.4	NM_006809.4		10953	40807467	NM_006809.4	TOMM34	NP_006800.2	ILMN_1721128	0001190445	S	1816	CTGGGCAGGGACTTGGTTTTTTGTTCCAACAGTGGCCTTCTCCGGGCTTC	20	-	43570954-43571003	20q13.12b	Homo sapiens translocase of outer mitochondrial membrane 34 (TOMM34), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 9324309] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9324309] [evidence TAS]	The process of directing proteins towards and into the mitochondrion, mediated by mitochondrial proteins that recognize signals contained within the imported protein [goid 6626] [pmid 9324309] [evidence TAS]	Interacting selectively with a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized [goid 5048] [pmid 9324309] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9660753] [evidence IPI]	HTOM34P; URCC3; TOM34	HTOM34P; URCC3; TOM34
Homo sapiens	RefSeq	NM_207435.1	ILMN_5279	C12ORF76	NM_207435.1	NM_207435.1		400073	46409493	NM_207435.1	C12orf76	NP_997318.1	ILMN_1753265	0006110215	S	1227	ATGCGCTGGTTGCAAAGTGGTGTCAGCTGTGGGGATCTTGGGCCCTCGTT	12	-	110479652-110479701	12q24.11c	Homo sapiens chromosome 12 open reading frame 76 (C12orf76), mRNA.				FLJ11385	FLJ11385
Homo sapiens	RefSeq	NM_207435.1	ILMN_5279	C12ORF76	NM_207435.1	NM_207435.1		400073	46409493	NM_207435.1	C12orf76	NP_997318.1	ILMN_2152429	0002510181	S	1563	CCCAGCCAACAGAAGTGCATGTCCACTGTGCGGGCCAGTGTGTGTTTACA	12	-	110479316-110479365	12q24.11c	Homo sapiens chromosome 12 open reading frame 76 (C12orf76), mRNA.				FLJ11385	FLJ11385
Homo sapiens	RefSeq	NM_016620.2	ILMN_25954	ZNF644	NM_016620.2	NM_016620.2		84146	41152094	NM_016620.2	ZNF644	NP_057704.2	ILMN_1657665	0000430458	I	150	CCCGTCCTGCAAGATCTTATGCGGCTAGGTGCCTGGGAAGTAACAGCAAG	1	-	91486831-91486880	1p22.2a	Homo sapiens zinc finger protein 644 (ZNF644), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BM-005; Zep-2; KIAA1221; MGC70410; MGC60165	BM-005; MGC70410; MGC60165; Zep-2; KIAA1221
Homo sapiens	RefSeq	XM_928437.1	ILMN_167593	FAM90A20	XM_001128051.1	XM_001128051.1		728430	113419908	XM_001128051.1	FAM90A20	XP_001128051.1	ILMN_1748539	0004150609	S	631	CCTCGGCCTGCAGTCAGGCACCAGGTCCACGAGACTCTCCTCGTGGTGGA	8	+	7142192-7142241	8p23.1f	PREDICTED: Homo sapiens family with sequence similarity 90, member A20 (FAM90A20), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	XM_939347.1	ILMN_33815	LOC650253	XM_939347.1	XM_939347.1		650253	89060828	XM_939347.1	LOC650253	XP_944440.1	ILMN_1712481	0006370463	S	3	GGGTGAAGCAGATCGCCTAGGAAAGTTTTTCATTGGTGGGCTTAATACGG					PREDICTED: Homo sapiens similar to RNA binding motif protein, X-linked (LOC650253), mRNA.					
Homo sapiens	RefSeq	NM_176797.1	ILMN_6153	P2RY6	NM_176796.1	NM_176796.1		5031	29029607	NM_176796.1	P2RY6	NP_789766.1	ILMN_1660031	0004390059	A	1439	GCACCAGGAGCCCCACCAACCCCAAACCATGCGGAGAATTAGAGTTCAGC	11	+	72686245-72686294	11q13.4b	Homo sapiens pyrimidinergic receptor P2Y, G-protein coupled, 6 (P2RY6), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8670200] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 8670200] [evidence TAS]; The directed movement of chloride ions across an epithelium [goid 30321] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA];  [goid 45029] [evidence IEA]	P2Y6; MGC15335	P2Y6; MGC15335
Homo sapiens	RefSeq	NM_014153.2	ILMN_23354	ZC3H7A	NM_014153.2	NM_014153.2		29066	27414496	NM_014153.2	ZC3H7A	NP_054872.2	ILMN_1693227	0004830050	S	3297	CGGAACCACTGGCATCAGATGGTGAAGTGACTGCTACCCGGTTGCCATCT	16	-	11844940-11844989	16p13.13b	Homo sapiens zinc finger CCCH-type containing 7A (ZC3H7A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSPC055; ZC3HDC7; ZC3H7; FLJ20318; FLJ10027	HSPC055; ZC3HDC7; ZC3H7; FLJ20318; FLJ10027
Homo sapiens	RefSeq	NM_015547.2	ILMN_22752	ACOT11	NM_015547.2	NM_015547.2		26027	25777708	NM_015547.2	ACOT11	NP_056362.1	ILMN_2353978	0007400315	A	1440	ACAAGCACTACCGGAGCGTGGAGCTAGTGCAGCAGGTAGACGAGGACGAC	1	+	54843458-54843470:54845395-54845431	1p32.3b	Homo sapiens acyl-CoA thioesterase 11 (ACOT11), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11696000] [evidence IC ]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 11696000] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 11696000] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [evidence ISS]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [pmid 11696000] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	BFIT2; BFIT1; THEA; THEM1; BFIT; KIAA0707; STARD14	BFIT2; BFIT1; THEA; THEM1; BFIT; KIAA0707; STARD14
Homo sapiens	RefSeq	NM_172251.1	ILMN_1467	MRPL54	NM_172251.1	NM_172251.1		116541	27436907	NM_172251.1	MRPL54	NP_758455.1	ILMN_1658486	0003710039	S	264	GGAAGGGCAGGATGTACCCCTGAAACCGGATGCTGAGTACCCTGAATGGC	19	+	3716282-3716329:3718259-3718260	19p13.3e	Homo sapiens mitochondrial ribosomal protein L54 (MRPL54), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]				
Homo sapiens	RefSeq	XR_015403.2	ILMN_170009	LOC728211	XR_015403.2	XR_015403.2		728211	169212677	XR_015403.2	LOC728211		ILMN_3219482	0001190079	A	1080	AGGTGATTTCAGATGGCCCAGAACATTGGCGGGCATTACTGCGTATCTGC	18	-	12065524-12065573	18p11.21e	PREDICTED: Homo sapiens similar to G protein-coupled receptor 124 (LOC728211), miscRNA.					
Homo sapiens	RefSeq	NM_139207.1	ILMN_5405	NAP1L1	NM_139207.1	NM_139207.1		4673	21327707	NM_139207.1	NAP1L1	NP_631946.1	ILMN_1699208	0003460167	A	3081	GGTCTTGGAATGTGAACACATTGTTTGTAGTGCTATCCATTCCTCTCCTG	12	-	74726645-74726694	12q21.2a	Homo sapiens nucleosome assembly protein 1-like 1 (NAP1L1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure [goid 5678] [pmid 8297347] [evidence TAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8297347] [evidence TAS]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 8297347] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8297347] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11940655] [evidence IPI]	NAP1; NRP; NAP1L; FLJ16112; MGC23410; MGC8688	NAP1; NRP; NAP1L; FLJ16112; MGC23410; MGC8688
Homo sapiens	RefSeq	NM_139207.1	ILMN_5405	NAP1L1	NM_139207.1	NM_139207.1		4673	21327707	NM_139207.1	NAP1L1	NP_631946.1	ILMN_1705876	0006590484	I	1470	ACTAGTTTTTCTGCCAGCTATGTTGAATGCACAAATTCTGTCACGCATGT	12	-	74728256-74728305	12q21.2a	Homo sapiens nucleosome assembly protein 1-like 1 (NAP1L1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure [goid 5678] [pmid 8297347] [evidence TAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8297347] [evidence TAS]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 8297347] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8297347] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11940655] [evidence IPI]	NAP1; NRP; NAP1L; FLJ16112; MGC23410; MGC8688	NAP1; NRP; NAP1L; FLJ16112; MGC23410; MGC8688
Homo sapiens	RefSeq	NM_139207.1	ILMN_5405	NAP1L1	NM_139207.1	NM_139207.1		4673	21327707	NM_139207.1	NAP1L1	NP_631946.1	ILMN_2408815	0007610682	A	3350	GCCAAAGTGAAGGTGTAGATAATACCTAGTCTTGTTACATAAAGGGGATG	12	-	74726376-74726425	12q21.2a	Homo sapiens nucleosome assembly protein 1-like 1 (NAP1L1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure [goid 5678] [pmid 8297347] [evidence TAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8297347] [evidence TAS]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 8297347] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8297347] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11940655] [evidence IPI]	NAP1; NRP; NAP1L; FLJ16112; MGC23410; MGC8688	NAP1; NRP; NAP1L; FLJ16112; MGC23410; MGC8688
Homo sapiens	RefSeq	NM_001007098.1	ILMN_30262	SCP2	NM_001007098.1	NM_001007098.1		6342	55956774	NM_001007098.1	SCP2	NP_001007099.1	ILMN_1674955	0000670377	I	1584	CCCCTCTCTCCTCCCCCAGCACCAAGAGGTAATCAATATCCTGAATTTGG	1	+	53232031-53232080	1p32.3d-p32.3c	Homo sapiens sterol carrier protein 2 (SCP2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 1703300] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [pmid 1703300] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA];  [goid 5498] [pmid 1703300] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15182174] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA + propanoyl-CoA = CoA + 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestanoyl-CoA [goid 33814] [evidence IEA]	SCPX; NSL-TP; DKFZp686C12188; NLTP; DKFZp686D11188	SCPX; NSL-TP; DKFZp686C12188; NLTP; DKFZp686D11188
Homo sapiens	RefSeq	NM_001075.2	ILMN_4885	UGT2B10	NM_001075.3	NM_001075.3		7365	142361212	NM_001075.3	UGT2B10	NP_001066.1	ILMN_1742444	0003890154	S	1409	TGCGCCACAAAGGAGCCAAACATCTTCGAGTTGCAGCCCACAACCTCACC	4	+	69730999-69731048	4q13.2c	Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide B10 (UGT2B10), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8333863] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	MGC142209	MGC142209
Homo sapiens	RefSeq	NM_020525.4	ILMN_9838	IL22	NM_020525.4	NM_020525.4		50616	41393566	NM_020525.4	IL22	NP_065386.1	ILMN_2100046	0006590332	S	419	GGCCAGGCTCAGCAACAGGCTAAGCACATGTCATATTGAAGGTGATGACC	12	-	68645339-68645358:68646284-68646313	12q15a	Homo sapiens interleukin 22 (IL22), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10875937] [evidence IC ]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IEA]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [pmid 11481447] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10954742] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10875937] [evidence IC ]; Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with the interleukin-22 receptor [goid 45518] [pmid 10875937] [evidence NAS]	IL21; IL-22; IL-TIF; TIFIL-23; IL-D110; ILTIF; TIFa; MGC79382; MGC79384; zcyto18; IL-21	IL21; IL-22; IL-TIF; TIFIL-23; IL-D110; ILTIF; TIFa; MGC79382; MGC79384; zcyto18; IL-21
Homo sapiens	RefSeq	NM_020525.4	ILMN_9838	IL22	NM_020525.4	NM_020525.4		50616	41393566	NM_020525.4	IL22	NP_065386.1	ILMN_1735208	0000730753	S	359	AGTGCTGTTCCCTCAATCTGATAGGTTCCAGCCTTATATGCAGGAGGTGG	12	-	68646324-68646373	12q15a	Homo sapiens interleukin 22 (IL22), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10875937] [evidence IC ]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IEA]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [pmid 11481447] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10954742] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10875937] [evidence IC ]; Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with the interleukin-22 receptor [goid 45518] [pmid 10875937] [evidence NAS]	IL21; IL-22; IL-TIF; TIFIL-23; IL-D110; ILTIF; TIFa; MGC79382; MGC79384; zcyto18; IL-21	IL21; IL-22; IL-TIF; TIFIL-23; IL-D110; ILTIF; TIFa; MGC79382; MGC79384; zcyto18; IL-21
Homo sapiens	RefSeq	NM_145858.1	ILMN_138826	CRYZL1	NM_145858.1	NM_145858.1		9946	22202615	NM_145858.1	CRYZL1	NP_665857.1	ILMN_1795407	0003170315	I	1338	GAGAGTGCAAAACTTGAAACAAGAGAAAGTGGCCTGCCTGGCATCCTCTG	21	-	33885446-33885495	21q22.11c	Homo sapiens crystallin, zeta (quinone reductase)-like 1 (CRYZL1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone [goid 3960] [pmid 10191096] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	QOH-1; 4P11	QOH-1; 4P11
Homo sapiens	RefSeq	XM_001720835.1	ILMN_350000	LOC730415	XM_001720835.1	XM_001720835.1		730415	169168946	XM_001720835.1	LOC730415	XP_001720887.1	ILMN_3228688	0007210253	A	736	GGTCTGAATCTGCACAGAGCAAGATGCTGAGTGGAGTCGGGGGCTTTGTG					PREDICTED: Homo sapiens hypothetical LOC730415, transcript variant 2 (LOC730415), mRNA.					
Homo sapiens	RefSeq	XM_929487.1	ILMN_42180	LOC644167	XM_929487.1	XM_929487.1		644167	89028271	XM_929487.1	LOC644167	XP_934580.1	ILMN_1751424	0000940253	S	1690	ATCCATCTGTTTAATGGACATTGATACATGGTTAATGTATAAATCATCTT	8	-	141113502-141113551		PREDICTED: Homo sapiens hypothetical protein LOC644167 (LOC644167), mRNA.					
Homo sapiens	RefSeq	XM_940979.1	ILMN_39201	LOC651760	XM_940979.1	XM_940979.1		651760	89066836	XM_940979.1	LOC651760	XP_946072.1	ILMN_1700112	0005810392	S	1	ATGGACAGTTGCTGCTGTTCCCTGGCTGTCCTCATCTCACTGAGCACCTG					PREDICTED: Homo sapiens similar to dual specificity phosphatase 22 (LOC651760), mRNA.					
Homo sapiens	RefSeq	NM_032477.1	ILMN_12476	MRPL41	NM_032477.1	NM_032477.1		64975	21265092	NM_032477.1	MRPL41	NP_115866.1	ILMN_1705464	0004780040	S	216	ATCGGCTTCCTCACCTCGGGCTGGAGGTTCGTGCAGATCAAGGAGATGGT	9	+	139566475-139566524	9q34.3f	Homo sapiens mitochondrial ribosomal protein L41 (MRPL41), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [pmid 16024796] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 16024796] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 16024796] [evidence IDA]	MRP-L27; RPML27; PIG3; BMRP	MRP-L27; RPML27; PIG3; BMRP
Homo sapiens	Unigene	Hs.561604	ILMN_114975	HS.561604	Hs.561604		Hs.561604		7152339	AW514171			ILMN_1911968	0000130195	S	98	ATGGGTTTTTCAAAGACAGTTTGGTGGGCAGGGGACCACGGTAGGGGGCA					hd24f04.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2910463 3 similar to contains LTR8.b1 LTR8 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_024618.2	ILMN_21063	NLRX1	NM_170722.1	NM_170722.1		79671	25777609	NM_170722.1	NLRX1	NP_733840.1	ILMN_1723768	0000430333	A	2911	GGATGCCCTCACATTGGTGCTTTCTCCTCATCCTCATGCCCCCTTTGCCA	11	+	118559805-118559854	11q23.3e	Homo sapiens NLR family member X1 (NLRX1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC131937; FLJ21478; NOD26; NOD9; CLR11.3; NOD5; DLNB26; MGC21025	MGC131937; FLJ21478; NOD26; NOD9; CLR11.3; NOD5; DLNB26; MGC21025
Homo sapiens	RefSeq	XR_016892.2	ILMN_162975	LOC646942	XR_016892.2	XR_016892.2		646942	169170888	XR_016892.2	LOC646942		ILMN_3200299	0004290669	A	290	CTGCAGCCGTCCAGAGACTGGCAGGCCTCGGCCTAAAGGTCTGGAGACTG	7	+	37381935-37381984	7p14.2a	PREDICTED: Homo sapiens misc_RNA (LOC646942), miscRNA.					
Homo sapiens	RefSeq	XR_040892.1	ILMN_342614	LOC729903	XR_040892.1	XR_040892.1		729903	169213606	XR_040892.1	LOC729903		ILMN_3224952	0004920224	A	369	TCCCCGTCGCTGCAAGTCCAAAAAGTTTGGAGGTCCTGGTGCCCGTGCTT	19	+	20097221-20097270	19p12d	PREDICTED: Homo sapiens misc_RNA (LOC729903), miscRNA.					
Homo sapiens	RefSeq	XR_019334.2	ILMN_178770	LOC400011	XR_019334.2	XR_019334.2		400011	169205195	XR_019334.2	LOC400011		ILMN_3204679	0000580017	A	1875	TACATACCAAGCGTCATACGATGACCGGGGAACAGACAGTACCAGCCTTG				12p12.3d	PREDICTED: Homo sapiens misc_RNA (LOC400011), miscRNA.					
Homo sapiens	RefSeq	NM_014859.4	ILMN_10794	RICH2	NM_014859.4	NM_014859.4		9912	151108508	NM_014859.4	RICH2	NP_055674.4	ILMN_3245564	0000840010	S	4082	GGGATGTGCAGAGTTTTGATGTTGCAGCTTTGCTCACTTCCTGGCAAGGG	17	+	12834602-12834651	17p12c	Homo sapiens Rho-type GTPase-activating protein RICH2 (RICH2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NPC-A-10; KIAA0672	
Homo sapiens	RefSeq	XM_496684.2	ILMN_34235	LOC441007	XM_496684.2	XM_496684.2		441007	88979616	XM_496684.2	LOC441007	XP_496684.2	ILMN_1788951	0002260240	S	505	ACAAATTCATACTAAAGAAGGCATGAGAAAACTCACACGGGACAGAGACC					PREDICTED: Homo sapiens similar to zinc finger protein 75 (LOC441007), mRNA.					
Homo sapiens	Unigene	Hs.475950	ILMN_95443	HS.475950	Hs.475950		Hs.475950		21477948	BQ574631			ILMN_1873893	0002060142	S	439	CCAGCCCTGGGGAATGAGTGATTGGCATGTCCCTTAGATAAACTCCTCCG	3	+	37762349-37762398		UI-H-EZ1-bba-l-21-0-UI.s1 NCI_CGAP_Ch2 Homo sapiens cDNA clone UI-H-EZ1-bba-l-21-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_936765.1	ILMN_33522	LOC647704	XM_936765.1	XM_936765.1		647704	89028481	XM_936765.1	LOC647704	XP_941858.1	ILMN_1693821	0001240215	S	998	CTGAGAAATTGGTGCACAGTTACCCCGGCCTGTGCCTGTCCCCTGAGAAC					PREDICTED: Homo sapiens similar to keratinocytes proline-rich protein (LOC647704), mRNA.					
Homo sapiens	RefSeq	NM_001033086.1	ILMN_24304	MACROD2	NM_080676.5	NM_080676.5		140733	117968620	NM_080676.5	MACROD2	NP_542407.2	ILMN_1677485	0005420114	I	585	AGCAGCCGGCCCCTGTTTGCTAGCTGAATGTCGTAACCTGAATGGCTGTG	20	+	13976303-13976352	20p12.1d-p12.1b	Homo sapiens MACRO domain containing 2 (MACROD2), transcript variant 1, mRNA.				C20orf133; RP11-189J1.1; dJ631M13.5	RP11-189J1.1; dJ631M13.5
Homo sapiens	RefSeq	XM_291991.4	ILMN_46918	LOC387870	XM_291991.4	XM_291991.4		387870	89035628	XM_291991.4	LOC387870	XP_291991.4	ILMN_1687928	0001990670	S	2213	CAACAAATGTAACAATGCCTGAAGGACCACCACAAAACTGCGTAACAGGC	12	+	79362746-79362760:79386620-79386654		PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, receptor type, Q isoform 1 precursor (LOC387870), mRNA.					
Homo sapiens	RefSeq	NM_007318.1	ILMN_11757	PSEN1	NM_007318.1	NM_007318.1		5663	7549812	NM_007318.1	PSEN1	NP_015557.1	ILMN_1808548	0003840730	I	307	GCTTCCCTCTCAGATTCTTCTCACCGTTGTGGTCAGCTCTGCTTTAGGCA	14	+	72673584-72673633	14q24.2b	Homo sapiens presenilin 1 (Alzheimer disease 3) (PSEN1), transcript variant I-463, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 9298903] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8878479] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the nuclear inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5639] [pmid 9298903] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [pmid 9246482] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12377771] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15274632] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15274632] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15274632] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IEA]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IEA]; The process whereby precursor cell type acquires the specialized features of a hemopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells [goid 2244] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2286] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage [goid 2573] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [pmid 15274632] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10805794] [evidence TAS]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 10206644] [evidence TAS]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IEA]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [pmid 15274632] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 11953314] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [pmid 15274632] [evidence IDA]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [pmid 9689133] [evidence IDA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [pmid 15274632] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; Any process that activates or increases the activity of an enzyme [goid 43085] [pmid 15274632] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IEA]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [pmid 8755489] [evidence IDA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [pmid 11104755] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PS1; AD3; FAD; S182	PS1; AD3; FAD; S182
Homo sapiens	RefSeq	XM_925853.1	ILMN_40865	LOC653053	XM_925853.2	XM_925853.2		653053	113411809	XM_925853.2	LOC653053	XP_930946.2	ILMN_1785471	0002600438	S	944	CAGAATGTCACAGTATTTACGAAGAATCCCCTGAGCGGTAAGCATTTGGT	1	-	50957-50966:50967-51006		PREDICTED: Homo sapiens similar to WD-repeat protein 47 (LOC653053), mRNA.					
Homo sapiens	RefSeq	NM_018420.1	ILMN_26230	SLC22A15	NM_018420.1	NM_018420.1		55356	24308160	NM_018420.1	SLC22A15	NP_060890.1	ILMN_1730639	0004480017	S	3698	TTGAAGACTAATTGGGAGTCCATCTCTCTATTGGCACTGGGTTCGATTGC	1	+	116413176-116413225	1p13.1d-p13.1c	Homo sapiens solute carrier family 22 (organic cation transporter), member 15 (SLC22A15), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	FLIPT1; DKFZp761G0313; PRO34686	DKFZp761G0313; FLIPT1; PRO34686
Homo sapiens	RefSeq	XR_037771.1	ILMN_336304	LOC100133823	XR_037771.1	XR_037771.1		100133823	169161989	XR_037771.1	LOC100133823		ILMN_3236675	0000070180	S	285	ACAAGGACTGAACACCCCCACCCCGATTTAGACCTGTGAGTGCTGCCCAC					PREDICTED: Homo sapiens misc_RNA (LOC100133823), miscRNA.					
Homo sapiens	Unigene	Hs.560319	ILMN_114168	HS.560319	Hs.560319		Hs.560319		21595632	BC032017			ILMN_1817816	0002850379	S	1918	GGAGTGGCAAGGTCTACACAGAGAGTATGGCTGTTGGAGGAATAGAGTTG	14	-	87694704-87694753		Homo sapiens cDNA clone IMAGE:4825254					
Homo sapiens	RefSeq	NM_022099.3	ILMN_3699	C20ORF51	NM_022099.3	NM_022099.3		63930	62177170	NM_022099.3	C20orf51	NP_071382.1	ILMN_1680665	0002900369	S	1330	GAGTATTGAGCTAATTCCAAAGCCCAGCAGAGACGTGGGCGCGCGTTTAT	20	-	61136265-61136314	20q13.33d	Homo sapiens chromosome 20 open reading frame 51 (C20orf51), mRNA.				bA305P22.4	bA305P22.4
Homo sapiens	RefSeq	NM_198434.1	ILMN_12352	AURKA	NM_198434.1	NM_198434.1		6790	38327565	NM_198434.1	AURKA	NP_940836.1	ILMN_2357438	0005420309	A	1987	TCCTTTAGGAATGCTGTGTGTCTGTCCGGCACCCCGGTAGGCCTGATTGG	20	-	54944646-54944695	20q13.2d-q13.31a	Homo sapiens aurora kinase A (AURKA), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9153231] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 9153231] [evidence TAS]	Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9153231] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [pmid 15504738] [evidence NAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 9153231] [evidence TAS]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [pmid 15987997] [evidence IMP]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15987997] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244051] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244051] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	STK15; STK7; AURA; AIK; BTAK; AURORA2; ARK1; MGC34538; STK6	STK15; STK7; AURA; AIK; BTAK; AURORA2; ARK1; MGC34538; STK6
Homo sapiens	RefSeq	XM_496707.2	ILMN_182376	TMEM150C	NM_001080506.1	NM_001080506.1		441027	122937457	NM_001080506.1	TMEM150C	NP_001073975.1	ILMN_1797047	0000990671	S	55	CCGCACCAGAGCAGTGGTACAGGCATGGATGGGAAGAAATGCAGCGTATG	4	-	83644808-83644834:83644835-83644844:83702083-83702095	4q21.22a	Homo sapiens transmembrane protein 150C (TMEM150C), mRNA.					
Homo sapiens	RefSeq	NM_012297.3	ILMN_14175	G3BP2	NM_012297.3	NM_012297.3		9908	45359844	NM_012297.3	G3BP2	NP_036429.2	ILMN_1759622	0002370754	I	6	AATCGTCCGGTGTGTGAGCCCGGGAGCCGGAGGTGTAGCGGCAGAGACAT	4	-	76817287-76817336	4q21.1a	Homo sapiens GTPase activating protein (SH3 domain) binding protein 2 (G3BP2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10969074] [evidence NAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The selective interaction of the transcription factor NF-kappaB with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 7253] [pmid 10969074] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 9575347] [evidence NAS]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [pmid 10969074] [evidence NAS]		
Homo sapiens	RefSeq	NM_016360.2	ILMN_25219	TACO1	NM_016360.2	NM_016360.2		51204	27545314	NM_016360.2	TACO1	NP_057444.2	ILMN_1685112	0006620544	S	1354	GACTCTGATGTTGGGTAGCTGGCCTCTGTGGGGATTGTAAGTGCCCTGAG	17	+	59039354-59039403	17q23.3a	Homo sapiens translational activator of mitochondrially encoded cytochrome c oxidase I (TACO1), nuclear gene encoding mitochondrial protein, mRNA.					
Homo sapiens	RefSeq	XM_208993.6	ILMN_165386	MGC34829	XM_208993.7	XM_208993.7		284069	113426915	XM_208993.7	MGC34829	XP_208993.6	ILMN_1791461	0005310010	A	2509	TTCGTGTCCCTCGACGGGCGCTCCAACTCGCAAGTGCGCCACTCTTACAT	17	-	39787095-39787144	17q21.31c	PREDICTED: Homo sapiens Similar to hypothetical gene supported by AL050367; AK022946 (MGC34829), mRNA.					
Homo sapiens	Unigene	Hs.556255	ILMN_112525	HS.556255	Hs.556255		Hs.556255		53851178	AY726563			ILMN_1886515	0005090221	S	2480	CCTGGAATTGCCCGGCCTCCGATGCTGGAATCAAAGATTGCCTTCCGAAG	11	+	45192771-45192820		Homo sapiens clone TESTIS-609 mRNA sequence					
Homo sapiens	RefSeq	XM_927114.1	ILMN_32179	LOC643837	XM_927114.1	XM_927114.1		643837	88942300	XM_927114.1	LOC643837	XP_932207.1	ILMN_1776137	0005570382	S	171	CGTGTGCCATGTGAGCCTGTTTCCTTTCTACAGTCACCAGTTCACGCAGC	1	+	770025-770074		PREDICTED: Homo sapiens hypothetical protein LOC643837 (LOC643837), mRNA.					
Homo sapiens	RefSeq	XR_018634.2	ILMN_171935	LOC649346	XR_018634.2	XR_018634.2		649346	169172401	XR_018634.2	LOC649346		ILMN_3282786	0004070458	M	1435	CCAGAAGAATGAATTTGGAAGACCCAGTTACAGTGTGTCCATAGGCAGGG				8p23.1a	PREDICTED: Homo sapiens misc_RNA (LOC649346), miscRNA.					
Homo sapiens	RefSeq	NM_001612.4	ILMN_1694	ACRV1	NM_020115.3	NM_020115.3		56	34328925	NM_020115.3	ACRV1	NP_064500.1	ILMN_1654468	0002570576	A	591	TCCTTCCCCAGTCAACAACTGACCACATCTGCCTCTGCCTGAGCATTAGG	11	-	125542360-125542409	11q24.2b	Homo sapiens acrosomal vesicle protein 1 (ACRV1), transcript variant 11, mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1693291] [evidence TAS]		SP-10; D11S4365; SPACA2	SP-10; D11S4365; SPACA2
Homo sapiens	RefSeq	NM_005304.2	ILMN_17813	FFAR3	NM_005304.2	NM_005304.2		2865	31377789	NM_005304.2	FFAR3	NP_005295.1	ILMN_1802735	0005050338	S	1459	AGGGGAGAACCCCATCCTCAGAGCTGCTCCCAGCCAGCGAGTCAGGAGCA	19	+	40543030-40543079	19q13.12a	Homo sapiens free fatty acid receptor 3 (FFAR3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9344866] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9344866] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	GPR41; FFA3R	GPR41; FFA3R
Homo sapiens	RefSeq	NM_006333.2	ILMN_25521	C1D	NM_006333.2	NM_006333.2		10438	27894371	NM_006333.2	C1D	NP_006324.1	ILMN_1762330	0002480674	A	1093	GATGGGAAATAAGGTTGTATGTTGATGGATGAATTTTGGCATGATGACTG	2	-	68122871-68122920	2p14b	Homo sapiens nuclear DNA-binding protein (C1D), transcript variant 1, mRNA.	Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9469821] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9469821] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence IEA]	MGC14659; MGC12261; SUNCOR	MGC14659; MGC12261; SUNCOR
Homo sapiens	RefSeq	NR_024014.1	ILMN_364188	PP14571	NR_024014.1	NR_024014.1		100130449	193794855	NR_024014.1	PP14571		ILMN_3237564	0000770369	S	1700	GCACCAGGGGCGGTGGAGAGGGGAAATGGGGAGTTACTGTTTAATGGGGA	2	-	241389103-241389152	2q37.3e	Homo sapiens similar to hCG1777210 (PP14571), non-coding RNA.					
Homo sapiens	RefSeq	XM_001723860.1	ILMN_347992	LOC100130452	XM_001723860.1	XM_001723860.1		100130452	169163438	XM_001723860.1	LOC100130452	XP_001723912.1	ILMN_3268048	0003940402	M	189	GCTCCCAGCGTGCCCGACACAGAAGACGGGTGATTTCTGCATTTTCACAG	2	-	197283517-197283566	2q33.1a	PREDICTED: Homo sapiens similar to hCG1777700 (LOC100130452), mRNA.					
Homo sapiens	RefSeq	XM_001715459.1	ILMN_334559	LOC100133080	XM_001715459.1	XM_001715459.1		100133080	169162906	XM_001715459.1	LOC100133080	XP_001715511.1	ILMN_3235358	0003140746	S	330	ACAACAGAAGATACAGGAAGGGAGAGGTGTCTGCTACCTTTTCACCCAGC	1	-	143176358-143176407	1q21.1a	PREDICTED: Homo sapiens similar to hCG1810766 (LOC100133080), mRNA.					
Homo sapiens	RefSeq	NM_153368.1	ILMN_25175	GJD4	NM_153368.2	NM_153368.2		219770	145699104	NM_153368.2	GJD4	NP_699199.2	ILMN_1654742	0004200132	S	1333	CCAGGCAGGAGGATCGTTTGAGAATATATCTCCTTGCCCAAGAGTTTGAG	10	+	35897616-35897665	10p11.21b	Homo sapiens gap junction protein, delta 4, 40.1kDa (GJD4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		FLJ90023; RP11-425A6.2; CX40.1	FLJ90023; RP11-425A6.2
Homo sapiens	Unigene	Hs.380659	ILMN_88774	HS.380659	Hs.380659		Hs.380659		23300332	BU633077			ILMN_1901455	0000240259	S	419	AGAGCTTCTCAGGGGGCTTACATGCCAGGCTGTCTCTGGGCATTGGCTGA	12	+	46092302-46092351		UI-H-FL1-bgt-m-05-0-UI.s1 NCI_CGAP_FL1 Homo sapiens cDNA clone UI-H-FL1-bgt-m-05-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XR_016353.2	ILMN_169487	LOC399988	XR_016353.2	XR_016353.2		399988	169204387	XR_016353.2	LOC399988		ILMN_3289721	0004670392	M	1296	GCCTGGTGTGCTTATTCAGGCTTATGAAGGTAAGCATGCCATGACCAAGG	12	+	4078314-4078363	12p13.32b	PREDICTED: Homo sapiens misc_RNA (LOC399988), miscRNA.					
Homo sapiens	RefSeq	NM_006533.1	ILMN_19975	MIA	NM_006533.2	NM_006533.2		8190	144226243	NM_006533.2	MIA	NP_006524.1	ILMN_1745077	0006980767	S	338	ATTCACCGGGGCCAAGTGGTGTATGTCTTCTCCAAGCTGAAGGGCCGTGG	19	+	41281719-41281768	19q13.2b	Homo sapiens melanoma inhibitory activity (MIA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7923218] [evidence TAS]	The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7923218] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	CD-RAP	CD-RAP
Homo sapiens	RefSeq	XR_039995.1	ILMN_351087	LOC644173	XR_039995.1	XR_039995.1		644173	169166419	XR_039995.1	LOC644173		ILMN_3294318	0006250301	M	1315	CCAGGGCTGACACCACTTGAAGATAAGCCCGTTCCTCTCTCTGGTATATT	4	-	56508887-56508936	4q12d	PREDICTED: Homo sapiens hypothetical LOC644173 (LOC644173), miscRNA.					
Homo sapiens	RefSeq	XM_927165.1	ILMN_3079	RPL17	NM_001035006.1	NM_001035006.1		6139	78000185	NM_001035006.1	RPL17	NP_001030178.1	ILMN_1658283	0007040095	S	107	ACTTGACCCGGAGAACCCCACGAAATCATGCAAATCAAGAGGTTCCAATC	18	-	47017791-47017815:47017902-47017926	18q21.1f	Homo sapiens ribosomal protein L17 (RPL17), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC117162; rpL23	
Homo sapiens	RefSeq	NM_001035006.1	ILMN_3079	RPL17	NM_001035006.1	NM_001035006.1		6139	78000185	NM_001035006.1	RPL17	NP_001030178.1	ILMN_2383097	0001450390	A	307	AGGCCAAGCAATGGGGCTGGACACAAGGTCGGTGGCCCAAAAAGAGTGCT	18	-	47016874-47016922:47017163-47017163	18q21.1f	Homo sapiens ribosomal protein L17 (RPL17), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC117162; rpL23	MGC117162; rpL23
Homo sapiens	RefSeq	NM_032126.1	ILMN_4686	C1ORF49	NM_032126.2	NM_032126.2		84066	142384360	NM_032126.2	C1orf49	NP_115502.1	ILMN_1722788	0002360463	S	774	CCACGCTGTGCCTGCCCCAAAGTCCCAGACTGAGGGAAGGTGAAGCTTAA	1	+	176758156-176758198:176758199-176758205	1q25.2b	Homo sapiens chromosome 1 open reading frame 49 (C1orf49), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [pmid 11256614] [evidence IDA]			DKFZP564J047; RP5-990P15.1; FLJ40199; MGC26863	DKFZP564J047; RP5-990P15.1; FLJ40199; MGC26863
Homo sapiens	RefSeq	NM_170710.3	ILMN_178033	WDR17	NM_170710.3	NM_170710.3		116966	55925652	NM_170710.3	WDR17	NP_733828.2	ILMN_1680375	0003850348	I	163	TGGATGACTTACATTTCAAATTGGTTTGAGCAAGATGATTGGTATGAAGG	4	+	177254671-177254720	4q34.2a	Homo sapiens WD repeat domain 17 (WDR17), transcript variant 1, mRNA.				FLJ26618	FLJ26618
Homo sapiens	RefSeq	NR_030582.1	ILMN_388053	MIR300	NR_030582.1	NR_030582.1		100126297	262205978	NR_030582.1	MIR300		ILMN_3309664	0001510403	S	27	CGCATTTGCTTTACTTGCAATGATTATACAAGGGCAGACTCTCTCTGGGG				14q32.31a	Homo sapiens microRNA 300 (MIR300), microRNA.					
Homo sapiens	RefSeq	NM_014397.3	ILMN_16991	NEK6	NM_014397.3	NM_014397.3		10783	34147501	NM_014397.3	NEK6	NP_055212.2	ILMN_1660871	0005860463	S	2429	GGGCGGCTGCTGTTTCCACACGTGGACTCGGATCTGCTGTGACACCGTCA	9	+	126154389-126154438	9q33.3a	Homo sapiens NIMA (never in mitosis gene a)-related kinase 6 (NEK6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12054534] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12054534] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 14563848] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 14563848] [evidence IDA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process that modulates the frequency, rate or extent of the onset of anaphase (chromosome movement) in the mitotic cell cycle [goid 30071] [pmid 14563848] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 14563848] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 14563848] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16476580] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 14563848] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SID6-1512	SID6-1512
Homo sapiens	RefSeq	NM_001654.1	ILMN_18073	ARAF	NM_001654.1	NM_001654.1		369	4502192	NM_001654.1	ARAF	NP_001645.1	ILMN_1658883	0002100576	S	2384	CCATGTGGATTTTGGGGGTCCCTTTTGTGTCTCCCCCGCCATTCAAGGAC	X	+	47316160-47316209	Xp11.23f	Homo sapiens v-raf murine sarcoma 3611 viral oncogene homolog (ARAF), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	 [goid 5057] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA];  [goid 5057] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ARAF1; PKS2; A-RAF; RAFA1	ARAF1; PKS2; A-RAF; RAFA1
Homo sapiens	RefSeq	XR_039889.1	ILMN_346328	LOC541472	XR_039889.1	XR_039889.1		541472	169172155	XR_039889.1	LOC541472		ILMN_3288752	0002760762	M	16	CCTGGAGCCCTGAAATTACTGAAGCCCACTTGGTTCAGGGCAGAAAGGGG				7p15.3c	PREDICTED: Homo sapiens hypothetical LOC541472 (LOC541472), miscRNA.					
Homo sapiens	RefSeq	NM_002737.2	ILMN_24085	PRKCA	NM_002737.2	NM_002737.2		5578	47157319	NM_002737.2	PRKCA	NP_002728.1	ILMN_1771800	0006560564	S	8528	GGAGGAAGAGACGGAGGTTGAGGTTTTTCCTTCTGTATAAGCACCTACTG	17	+	62237082-62237131	17q24.2a	Homo sapiens protein kinase C, alpha (PRKCA), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 17983652] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17983652] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9814702] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9814702] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10194441] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10856305] [evidence EXP]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IEA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [evidence IEA]; Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IEA]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle contraction [goid 6937] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 10825394] [evidence TAS]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [evidence IEA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46325] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of insulin receptor signaling [goid 46627] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IEA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol and calcium [goid 4698] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12893243] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]	MGC129901; MGC129900; PRKACA; PKCA; AAG6; PKC-alpha	MGC129901; MGC129900; PRKACA; PKCA; AAG6; PKC-alpha
Homo sapiens	RefSeq	NM_145872.1	ILMN_7187	ASB4	NM_145872.1	NM_145872.1		51666	22208963	NM_145872.1	ASB4	NP_665879.1	ILMN_1813668	0001170382	I	1343	GACTCAGCCTGCTTTGAAATTAGCTTGTAGCCATGAAAGGGCCACCCGAT	7	+	94995916-94995965	7q21.3b	Homo sapiens ankyrin repeat and SOCS box-containing 4 (ASB4), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		MGC142041; MGC142039; ASB-4	MGC142041; MGC142039; ASB-4
Homo sapiens	RefSeq	XR_038945.1	ILMN_338953	LOC100131526	XR_038945.1	XR_038945.1		100131526	169184507	XR_038945.1	LOC100131526		ILMN_3280496	0002900022	M	250	ATGAATGGGTGCAGTGGGAAAAAGCTAATGGCACAACTGTCCACATAGGC				10q22.2a	PREDICTED: Homo sapiens misc_RNA (LOC100131526), miscRNA.					
Homo sapiens	RefSeq	NM_022437.2	ILMN_178976	ABCG8	NM_022437.2	NM_022437.2		64241	34452700	NM_022437.2	ABCG8	NP_071882.1	ILMN_1680309	0002690367	S	2312	CACTGGCAGGAGACTGCGATGACTGGGAGAAAACCTGCACTCGGTGGCAC	2	+	43958756-43958805	2p21d	Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 8 (ABCG8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of sterols into, out of, within or between cells. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 15918] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16870176] [evidence IPI]	MGC142217; GBD4; STSL	GBD4; MGC142217; sterolin 2; STSL
Homo sapiens	Unigene	Hs.334122	ILMN_86514	HS.334122	Hs.334122		Hs.334122		13746213	BG220192			ILMN_1843135	0001470458	S	96	CCTCCTCACCCATCGAGACCTGTGAAGCCAGCGATATGTGTTTTGCGAAC	21	-	31100290-31100339		RST39964 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_019624.2	ILMN_10252	ABCB9	NM_019624.2	NM_019624.2		23457	45243513	NM_019624.2	ABCB9	NP_062570.1	ILMN_2343048	0006900241	A	3298	AGCCCAGGATCTGGCTTTGCCAGAGGTTGCAACATGTTGAGAGAACCCGG	12	-	121979521-121979570	12q24.31d	Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 9 (ABCB9), transcript variant 2, mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10748049] [evidence NAS]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 10748049] [evidence NAS]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10748049] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10748049] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10748049] [evidence NAS]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	TAPL; KIAA1520; EST122234	TAPL; KIAA1520; EST122234
Homo sapiens	RefSeq	NM_019624.2	ILMN_10252	ABCB9	NM_019624.2	NM_019624.2		23457	45243513	NM_019624.2	ABCB9	NP_062570.1	ILMN_2343047	0005290598	A	3214	GCCCCTGTGCTCTGCTGTCTGGAGGCCACGTGGATGTTCATGAGATGCAT	12	-	121979605-121979654	12q24.31d	Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 9 (ABCB9), transcript variant 2, mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10748049] [evidence NAS]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 10748049] [evidence NAS]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10748049] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10748049] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10748049] [evidence NAS]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	TAPL; KIAA1520; EST122234	TAPL; KIAA1520; EST122234
Homo sapiens	RefSeq	NM_022475.1	ILMN_18643	HHIP	NM_022475.1	NM_022475.1		64399	20143972	NM_022475.1	HHIP	NP_071920.1	ILMN_1675453	0005820039	S	2645	CCTCAATGTGAACAAGTGGACAGAAACATCCGCAGAGTGACCAGGGCAGG	4	+	145658996-145659045	4q31.22a	Homo sapiens hedgehog interacting protein (HHIP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HIP; FLJ20992; FLJ90230	HIP; FLJ20992; FLJ90230
Homo sapiens	RefSeq	NM_022475.1	ILMN_18643	HHIP	NM_022475.1	NM_022475.1		64399	20143972	NM_022475.1	HHIP	NP_071920.1	ILMN_2204215	0007510743	S	3298	CCAGTTACAGAATGCTACACACTTACCTTTTTATTGGCTGAGAAATCTGG	4	+	145659649-145659698	4q31.22a	Homo sapiens hedgehog interacting protein (HHIP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HIP; FLJ20992; FLJ90230	HIP; FLJ20992; FLJ90230
Homo sapiens	RefSeq	XR_000272.2	ILMN_33044	LOC401238	XR_000272.2	XR_000272.2		401238	88992550	XR_000272.2	LOC401238		ILMN_1675946	0006480390	S	185	ATGCCACACCCTTCAAGATTGCTCGGGGCCAGATCTTGAAGATACTCACA	6	+	24080804-24080853		PREDICTED: Homo sapiens similar to interferon stimulated exonuclease gene 20kDa-like 2 (LOC401238), mRNA.					
Homo sapiens	RefSeq	NM_018170.2	ILMN_174036	P15RS	NM_018170.2	NM_018170.2		55197	21361708	NM_018170.2	P15RS	NP_060640.2	ILMN_2209180	0000270524	S	4110	GTTGCCAACTGTTGTTCCAGCCATCCACACAGGAGTCTGTTCTGAGGTGG	18	-	31823897-31823946	18q12.2a	Homo sapiens hypothetical protein FLJ10656 (P15RS), mRNA.				FLJ10656; MGC19513	FLJ10656; MGC19513
Homo sapiens	RefSeq	NM_022442.3	ILMN_12143	UBE2V1	NM_022442.3	NM_022442.3		7335	40806165	NM_022442.3	UBE2V1	NP_071887.1	ILMN_2400206	0003060332	A	788	GGATCAAGAAAGTCTATTTAAATTGATTCCCATCATAACTGGTGGGGCAC	20	-	48132409-48132458	20q13.13e	Homo sapiens ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9305758] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16129784] [evidence IDA]; Any complex that possesses ubiquitin conjugating enzyme activity [goid 31371] [pmid 16129784] [evidence IDA]	The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 10089880] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA repair [goid 6282] [pmid 10089880] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9305758] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 9418904] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 16129784] [evidence IMP]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 16129784] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16129784] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9305758] [evidence TAS]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	UBE2V; UEV-1; UEV1A; CROC1; UEV1; CIR1; CROC-1	UBE2V; UEV-1; UEV1A; CROC1; UEV1; CIR1; CROC-1
Homo sapiens	RefSeq	NM_003134.4	ILMN_16287	SRP14	NM_003134.4	NM_003134.4		6727	149999610	NM_003134.4	SRP14	NP_003125.3	ILMN_3251269	0003190730	S	931	CTCATGAGCTGCTTCCCACCTGGCTGTATAATTTTATCATCATGGTTCCC	15	-	40328036-40328085	15q15.1a	Homo sapiens signal recognition particle 14kDa (homologous Alu RNA binding protein) (SRP14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8196634] [evidence TAS]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [pmid 2557625] [evidence TAS]	The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of translational elongation [goid 45900] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [pmid 8196634] [evidence TAS]; Interacting selectively with an endoplasmic reticulum signal peptide, a specific peptide sequence that acts as a signal to localize the protein within the endoplasmic reticulum [goid 30942] [evidence IEA]	ALURBP; MGC14326	ALURBP; MGC14326
Homo sapiens	RefSeq	NR_029950.1	ILMN_387878	MIR20B	NR_029950.1	NR_029950.1		574032	262205365	NR_029950.1	MIR20B		ILMN_3310835	0000780438	S	18	GTGCAGGTAGTTTTGGCATGACTCTACTGTAGTATGGGCACTTCCAGTAC				Xq26.2b	Homo sapiens microRNA 20b (MIR20B), microRNA.					
Homo sapiens	RefSeq	NM_015065.1	ILMN_30102	EXPH5	NM_015065.1	NM_015065.1		23086	21359817	NM_015065.1	EXPH5	NP_055880.1	ILMN_1712066	0007650286	S	6299	TCTTAGCCTGCCTTTCCACCACTCCCACTTAATCCCTGATTCACTGTCTG	11	-	107885192-107885241	11q22.3c	Homo sapiens exophilin 5 (EXPH5), mRNA.		The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]	SLAC2-B; KIAA0624; DKFZp781H0795; MGC134967; MGC133291	SLAC2-B; KIAA0624; DKFZp781H0795; MGC134967; MGC133291
Homo sapiens	RefSeq	XM_942177.1	ILMN_32745	LOC652630	XM_942177.1	XM_942177.1		652630	89063372	XM_942177.1	LOC652630	XP_947270.1	ILMN_1698568	0001500468	S	2	TGAAAGGAGGTATCGGTGAATGTTCCCGACCCAAAAGGGGGAAACATGCC					PREDICTED: Homo sapiens similar to synovial sarcoma, X breakpoint 9 (LOC652630), mRNA.					
Homo sapiens	RefSeq	NM_001033018.1	ILMN_22682	DEFB137	NM_001033018.1	NM_001033018.1		613210	74136824	NM_001033018.1	DEFB137	NP_001028190.1	ILMN_1778631	0000050377	S	172	CTGTCTTGCTGTAAAAATATGACACGTTTTCAACCCCCGCAAGCCAAATG				8p23.1a	Homo sapiens beta-defensin 137 (DEFB137), mRNA.				DEFB136	DEFB136
Homo sapiens	Unigene	Hs.537944	ILMN_103603	HS.537944	Hs.537944		Hs.537944		10939607	BF109917			ILMN_1890521	0007400075	S	315	GCACTTGGGAGTTTTTTGCACTAAGGATAAGTGGGCTGGCTCTTCTCAAC	1	-	107406568-107406617		7l71g02.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:3526851 3, mRNA sequence					
Homo sapiens	RefSeq	NR_002557.1	ILMN_13542	LOC613038	NR_002557.1	NR_002557.1		613038	73760398	NR_002557.1	LOC613038		ILMN_3239783	0006480719	S	200	AGCCAGGGAAGACCTCCCTGTGGAGGTGGCAGGTTATCAAGACTGAAGAT	16	-	30217999-30218048	16p11.2d	Homo sapiens coiled-coil domain containing 101 pseudogene (LOC613038), non-coding RNA.					
Homo sapiens	RefSeq	NM_001014447.1	ILMN_14396	CPZ	NM_001014447.1	NM_001014447.1		8532	62388876	NM_001014447.1	CPZ	NP_001014447.1	ILMN_1690945	0005340064	A	1750	AGACTGCTGCCCCCAGGTATCCACATTGTCATTGCCCAAGCCCCTGGCTA	4	+	8621009-8621058	4p16.1c	Homo sapiens carboxypeptidase Z (CPZ), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9099699] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 9099699] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC99682	MGC99682
Homo sapiens	RefSeq	NM_001014447.1	ILMN_14396	CPZ	NM_001014447.1	NM_001014447.1		8532	62388876	NM_001014447.1	CPZ	NP_001014447.1	ILMN_1705258	0004390193	A	1670	GCAAGCCAGTCAAAAACGCCCGGATCTCAGTCAAAGGCATTCGCCACGAC	4	+	8620196-8620245	4p16.1c	Homo sapiens carboxypeptidase Z (CPZ), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9099699] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 9099699] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC99682	MGC99682
Homo sapiens	RefSeq	NM_013378.1	ILMN_2270	VPREB3	NM_013378.1	NM_013378.1		29802	7019566	NM_013378.1	VPREB3	NP_037510.1	ILMN_1700147	0004640768	S	320	AGGCCCACAATGCCTGTGTCCTCACCATTAGTCCCGTGCAGCCTGAAGAC	22	-	22425107-22425156	22q11.23a	Homo sapiens pre-B lymphocyte gene 3 (VPREB3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10702669] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]			8HS20; N27C7-2	8HS20; N27C7-2
Homo sapiens	RefSeq	NM_005792.1	ILMN_24575	MPHOSPH6	NM_005792.1	NM_005792.1		10200	5031918	NM_005792.1	MPHOSPH6	NP_005783.1	ILMN_1781360	0002260703	S	391	CCTTGGTGGGGACAATTGGGAAAAAGTTTGCCAGAAAGAGAGACCATGCC	16	-	80739911-80739960	16q23.3a	Homo sapiens M-phase phosphoprotein 6 (MPHOSPH6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [pmid 8885239] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	MPP6; MPP-6; MPP	MPP6; MPP-6; MPP
Homo sapiens	RefSeq	NM_004856.4	ILMN_11802	KIF23	NM_004856.4	NM_004856.4		9493	20143965	NM_004856.4	KIF23	NP_004847.2	ILMN_1811472	0004120278	A	2635	CAGCTGGGACCTGGATATCAGCATCACGCACAACCCAAGCGCAAAAAGCC	15	+	67526297-67526334:67527185-67527196	15q23a	Homo sapiens kinesin family member 23 (KIF23), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15199097] [evidence EXP]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 1406973] [evidence TAS]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [pmid 1406973] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Lengthening of the distance between poles of the mitotic spindle [goid 22] [pmid 1406973] [evidence TAS]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 1406973] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18329369] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MKLP-1; CHO1; KNSL5; MKLP1	MKLP-1; CHO1; KNSL5; MKLP1
Homo sapiens	RefSeq	NM_153758.1	ILMN_14921	IL19	NM_013371.2	NM_013371.2		29949	30795207	NM_013371.2	IL19	NP_037503.2	ILMN_1799575	0003180068	A	1680	CCTGCAGGCCATCCTGGGAGTAAAGGGCTGCCTTCCCATCTAATTTATTG	1	+	205082797-205082846	1q32.1h	Homo sapiens interleukin 19 (IL19), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11196675] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 11196675] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11196675] [evidence NAS]; The chemical reactions and pathways resulting in the formation of interleukin-6 [goid 42226] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 11196675] [evidence TAS]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	NG.1; ZMDA1; IL-10C; MDA1	NG.1; IL-10C; ZMDA1; MDA1
Homo sapiens	RefSeq	NM_013371.2	ILMN_14921	IL19	NM_013371.2	NM_013371.2		29949	30795207	NM_013371.2	IL19	NP_037503.2	ILMN_1682592	0006330070	I	887	GAGAGCACTGAGAGGAGACACAAGGAGCAGCCCGCAAGCACCAAGTGAGA	1	+	205074318-205074367	1q32.1h	Homo sapiens interleukin 19 (IL19), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11196675] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 11196675] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11196675] [evidence NAS]; The chemical reactions and pathways resulting in the formation of interleukin-6 [goid 42226] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 11196675] [evidence TAS]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	NG.1; ZMDA1; IL-10C; MDA1	NG.1; IL-10C; ZMDA1; MDA1
Homo sapiens	RefSeq	NM_001025100.1	ILMN_10370	MBP	NM_001025100.1	NM_001025100.1		4155	68509937	NM_001025100.1	MBP	NP_001020271.1	ILMN_1672660	0003780681	I	4616	CTGCTCACTGTGTCCTTCTGTGGTCTCAGGAGCTGCAGTTGTTGCTGTTG	18	-	74724962-74725011	18q23b	Homo sapiens myelin basic protein (MBP), transcript variant 8, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7504278] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 2434243] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 2434243] [evidence TAS]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [pmid 2434243] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the myelin sheath of a nerve [goid 19911] [evidence IEA]	MGC99675	MGC99675
Homo sapiens	RefSeq	NM_052838.2	ILMN_12249	SEPT1	NM_052838.2	NM_052838.2		1731	22209006	NM_052838.2	SEPT1	NP_443070.1	ILMN_2415162	0004480279	A	1218	AAGAGATGCTGGAGAAGATGCAGGCCCAAATGCAGCAGAGCCAGGCCCAG	16	-	30389778-30389827	16p11.2d	Homo sapiens septin 1 (SEPT1), mRNA. XM_944608 XM_944610	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16179162] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC20394; DIFF6; LARP; SEP1; PNUTL3	MGC20394; DIFF6; LARP; SEP1; PNUTL3
Homo sapiens	RefSeq	NM_054024.3	ILMN_30061	MIA2	NM_054024.3	NM_054024.3		117153	46094008	NM_054024.3	MIA2	NP_473365.3	ILMN_2158665	0001500100	S	1910	TACCCTGCTAAATAGTCAGATGGTTTCAACTGATAACTCTTTGTCTTCTC	14	+	38791851-38791900	14q21.1b	Homo sapiens melanoma inhibitory activity 2 (MIA2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ22404	FLJ22404
Homo sapiens	RefSeq	NM_054024.3	ILMN_30061	MIA2	NM_054024.3	NM_054024.3		117153	46094008	NM_054024.3	MIA2	NP_473365.3	ILMN_1656743	0004540674	S	1849	CGAAACCATCAGTAGACACCGAAGGGCCTGCTCTGGTGGAGATAGACAGA	14	+	38791790-38791839	14q21.1b	Homo sapiens melanoma inhibitory activity 2 (MIA2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ22404	FLJ22404
Homo sapiens	RefSeq	NM_032180.1	ILMN_5829	FLJ13305	NM_032180.1	NM_032180.1		84140	83523747	NM_032180.1	FLJ13305	NP_115556.1	ILMN_2120072	0005870072	S	1417	GTGCCCACGGTATCTTCCAGAGGACGAGAACAAGCCGTAAGAAAGAGCGA	2	-	61916739-61916748:61920060-61920099	2p15c	Homo sapiens hypothetical protein FLJ13305 (FLJ13305), mRNA. XM_934538 XM_934541 XM_934544 XM_942148 XM_945748 XM_945749 XM_945750 XM_945751 XM_945752 XM_945754 XM_945756				MGC129982; MGC129983	MGC129982; MGC129983
Homo sapiens	RefSeq	NM_001012959.1	ILMN_27060	DISC1	NM_001012958.1	NM_001012958.1		27185	61742826	NM_001012958.1	DISC1	NP_001012976.1	ILMN_1719203	0003710187	A	1022	CCACTCTTGGGACACCCTGCTCAGGAAATGGGAGCCAGTGCTGCGGGACT	1	+	229897096-229897145	1q42.2a-q42.2b	Homo sapiens disrupted in schizophrenia 1 (DISC1), transcript variant Es, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15094396] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]	SCZD9; KIAA0457	SCZD9; KIAA0457
Homo sapiens	RefSeq	NM_001012958.1	ILMN_27060	DISC1	NM_001012958.1	NM_001012958.1		27185	61742826	NM_001012958.1	DISC1	NP_001012976.1	ILMN_1742837	0002140220	I	2488	GGTCAGTGGCTTTCACAGTTTGTGATGGTGACTCCAGGAAGGAAACTCAC	1	+	229926295-229926344	1q42.2a-q42.2b	Homo sapiens disrupted in schizophrenia 1 (DISC1), transcript variant Es, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15094396] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]	SCZD9; KIAA0457	SCZD9; KIAA0457
Homo sapiens	RefSeq	NM_002303.3	ILMN_20357	LEPR	NM_002303.3	NM_002303.3		3953	51093382	NM_002303.3	LEPR	NP_002294.2	ILMN_1696391	0003400747	I	3504	CGTGCCCATTCCCAGCCCCCTGTTTATTCACGGACATCAGAGTTCTCCAG	1	+	65875090-65875139	1p31.3b	Homo sapiens leptin receptor (LEPR), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	 [goid 6112] [pmid 9537324] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9537324] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9537324] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IEA]	 [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11279102] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OBR; CD295	OBR; CD295
Homo sapiens	RefSeq	NM_003519.3	ILMN_27190	HIST1H2BL	NM_003519.3	NM_003519.3		8340	15718719	NM_003519.3	HIST1H2BL	NP_003510.1	ILMN_1652998	0007610349	S	388	GTACACCAGCTCCAAGTAAATTCTCAAGCTCTTGTCCAACCCAAAGGCTC	6	-	27883251-27883282:27883283-27883300	6p22.1c	Homo sapiens histone cluster 1, H2bl (HIST1H2BL), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [pmid 9439656] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 9439656] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9439656] [evidence NAS]	H2B/c; dJ97D16.4; H2BFC	H2B/c; dJ97D16.4; H2BFC
Homo sapiens	RefSeq	XM_926988.1	ILMN_44667	LOC643686	XM_926988.1	XM_926988.1		643686	88985517	XM_926988.1	LOC643686	XP_932081.1	ILMN_1657959	0001980440	S	131	GCAGCACCCTGCCCCTCATCATCCTGTGCCTCCTGGAGATGACTACCTAC	5	-	150726299-150726348		PREDICTED: Homo sapiens similar to tramdorin 1 (LOC643686), mRNA.					
Homo sapiens	RefSeq	NM_004218.1	ILMN_3799	RAB11B	NM_004218.2	NM_004218.2		9230	141803544	NM_004218.2	RAB11B	NP_004209.1	ILMN_1731135	0001190113	S	619	ACGGACAGAAGCCCAACAAGCTGCAGTGCTGCCAGAACCTGTGACCCCTG	19	+	8374399-8374442:8374443-8374448	19p13.2d	Homo sapiens RAB11B, member RAS oncogene family (RAB11B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 7811277] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	H-YPT3; MGC133246	H-YPT3; MGC133246
Homo sapiens	RefSeq	NR_029860.1	ILMN_388166	MIR367	NR_029860.1	NR_029860.1		442912	262206193	NR_029860.1	MIR367		ILMN_3310800	0006270370	S	18	TGCAACTCTGTTGAATATAAATTGGAATTGCACTTTAGCAATGGTGATGG				4q25f	Homo sapiens microRNA 367 (MIR367), microRNA.					
Homo sapiens	RefSeq	XM_001725931.1	ILMN_341681	LOC729870	XM_001725931.1	XM_001725931.1		729870	169166272	XM_001725931.1	LOC729870	XP_001725983.1	ILMN_3301016	0006480309	M	997	TCAACCCCGTGACAGTGGGCCTCCCCCCAACTGTATTGAGCATGCACTCT	4	-	154075414-154075463	4q31.3d	PREDICTED: Homo sapiens hypothetical LOC729870, transcript variant 2 (LOC729870), mRNA.					
Homo sapiens	RefSeq	NM_003157.1	ILMN_6182	NEK4	NM_003157.3	NM_003157.3		6787	148839315	NM_003157.3	NEK4	NP_003148.2	ILMN_1721129	0006370079	S	2108	TGAGTGTAGCAGGGCCAGGAAAACCCCAGGAAGAAGACCAGCCCTTGCCT	3	-	52779850-52779899	3p21.1d	Homo sapiens NIMA (never in mitosis gene a)-related kinase 4 (NEK4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8208544] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8208544] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	pp12301; STK2; MGC33171; NRK2	pp12301; STK2; NRK2; MGC33171
Homo sapiens	RefSeq	Hs.117030	ILMN_175082	LOC646708	XR_018881.1	XR_018881.1		646708	113420340	XR_018881.1	LOC646708		ILMN_1847415	0001070743	S	1172	TCACGCAGTCGAGGCTGCTCTCAGGTGCTACGTGTTGCCAGTGGTGGCAC				8p21.3a-p21.2d	PREDICTED: Homo sapiens similar to DnaJ homolog subfamily C member 5 (Cysteine string protein) (CSP) (LOC646708), mRNA.					
Homo sapiens	Unigene	Hs.564280	ILMN_116972	HS.564280	Hs.564280		Hs.564280		3178907	AA992025			ILMN_1870681	0001660491	S	322	CCTCCCAATTTTGAGGCTAGAAGTCCAAAATCAAGGTGTTGGGAAGGGCC					ot36c06.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1618858 3, mRNA sequence					
Homo sapiens	Unigene	Hs.570442	ILMN_122623	HS.570442	Hs.570442		Hs.570442		27844148	BX099637			ILMN_1875729	0000430338	S	384	CCCAGAAGAGCCTGGGAGAAGGGAAGATGGTGAACACAGTGGAGTTCTGC	21	+	41981608-41981657		BX099637 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998H224003, mRNA sequence					
Homo sapiens	RefSeq	NM_001931.2	ILMN_20014	DLAT	NM_001931.2	NM_001931.2		1737	31711991	NM_001931.2	DLAT	NP_001922.2	ILMN_1706583	0006330689	S	3056	GTTCTGTGTCCTTCTACTCCAGCATCGTCTCATGTAAAATAAGAAAGCCC	11	+	111439555-111439604	11q23.1c	Homo sapiens dihydrolipoamide S-acetyltransferase (DLAT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA in eukaryotes; includes subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). Usually contains more subunits than its bacterial counterpart; for example, one known complex contains 30 E1 dimers, 60 E2 monomers, and 6 E3 dimers as well as a few copies of pyruvate dehydrogenase kinase and pyruvate dehydrogenase phosphatase [goid 5967] [pmid 3191998] [evidence NAS]	The chemical reactions and pathways resulting in the formation of acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated [goid 6085] [evidence NAS]; The chemical reactions and pathways involving pyruvate, 2-oxopropanoate [goid 6090] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + dihydrolipoamide = CoA + S-acetyldihydrolipoamide [goid 4742] [pmid 3191998] [evidence NAS]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with lipoic acid, 1,2-dithiolane-3-pentanoic acid [goid 31405] [evidence IEA]	PDC-E2; DLTA; PDCE2	PDC-E2; DLTA; PDCE2
Homo sapiens	RefSeq	XM_932068.1	ILMN_44024	LOC642780	XM_932068.1	XM_932068.1		642780	89040560	XM_932068.1	LOC642780	XP_937161.1	ILMN_1666935	0003610543	I	762	CACAGTGGAGTTACTGTTCATCATGGGGGTACCGTGGACAATCCCAGGGC	16	+	88728343-88728392		PREDICTED: Homo sapiens similar to hypothetical protein LOC284701, transcript variant 2 (LOC642780), mRNA.					
Homo sapiens	RefSeq	XM_932068.1	ILMN_44024	LOC642780	XM_932068.1	XM_932068.1		642780	89040560	XM_932068.1	LOC642780	XP_937161.1	ILMN_1752798	0002450392	A	540	TGCACTCCGCAGCTTGTGCTGCCCGTCTCGAATGACTGGAGTTTCCTGCT	16	+	88727237-88727286		PREDICTED: Homo sapiens similar to hypothetical protein LOC284701, transcript variant 2 (LOC642780), mRNA.					
Homo sapiens	RefSeq	XR_040782.1	ILMN_337268	LOC728208	XR_040782.1	XR_040782.1		728208	169164879	XR_040782.1	LOC728208		ILMN_3231050	0003710338	I	2025	CTGGTCAGGTCTTGATGAGCCCCGAGCCCTTGCACCTTCCTGAGGGTTTT				2q37.3f	PREDICTED: Homo sapiens misc_RNA (LOC728208), miscRNA.					
Homo sapiens	RefSeq	NM_017852.1	ILMN_17259	NLRP2	NM_017852.1	NM_017852.1		55655	8923472	NM_017852.1	NLRP2	NP_060322.1	ILMN_1664878	0001510170	S	3029	ACCAGAGCCTCGTCACTCTGGACCTGGGTCAGAATCCCTTGGGGTCTAGT	19	+	60200560-60200609	19q13.42b	Homo sapiens NLR family, pyrin domain containing 2 (NLRP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15030775] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43280] [pmid 15030775] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [pmid 15030775] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15030775] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a Pyrin (PAAD/DAPIN) domain, a protein-protein interaction domain that has the same fold as the Death domain [goid 32090] [pmid 15030775] [evidence IPI]	NALP2; CLR19.9; PYPAF2; PAN1; FLJ20510; NBS1	NALP2; CLR19.9; PYPAF2; PAN1; FLJ20510; NBS1
Homo sapiens	RefSeq	XM_938432.1	ILMN_42572	LOC649360	XM_938432.1	XM_938432.1		649360	89057294	XM_938432.1	LOC649360	XP_943525.1	ILMN_1808649	0001500564	S	36	AGATGTGGGTGAAGAGTTAAACCAGGGAGCTGAATATCATGGGTATGGCC					PREDICTED: Homo sapiens similar to cleavage and polyadenylation specific factor 6 (LOC649360), mRNA.					
Homo sapiens	RefSeq	XM_937346.1	ILMN_36047	LOC648287	XM_937346.1	XM_937346.1		648287	88970756	XM_937346.1	LOC648287	XP_942439.1	ILMN_1690031	0005870170	S	1	ATGGCGAACACCCTTCCCCCCACCAAACTCAAGCATCCCAGGTCAACTTC					PREDICTED: Homo sapiens hypothetical protein LOC648287 (LOC648287), mRNA.					
Homo sapiens	RefSeq	NM_182634.2	ILMN_15856	FLJ36166	NM_182634.2	NM_182634.2		349152	56119633	NM_182634.2	FLJ36166	NP_872440.2	ILMN_2162496	0006860491	S	3254	GCGTGTTTTAGCTACAAACGTTTATCTAAGATGCTGTCTTTGCAGGTGCC	7	-	102613200-102613220:102637950-102637978	7q22.1f	Homo sapiens hypothetical protein FLJ36166 (FLJ36166), mRNA. XM_934944 XM_934947 XM_935547 XM_935835 XM_935837 XM_935840 XM_935841 XM_935843 XM_935844 XM_937179 XM_943199 XM_943200 XM_943203 XM_943207 XM_943210 XM_943212					
Homo sapiens	RefSeq	NM_001702.1	ILMN_161986	BAI1	NM_001702.2	NM_001702.2		575	111118993	NM_001702.2	BAI1	NP_001693.2	ILMN_1797130	0006220612	A	4890	GATCCCGCTGGTGGGCCAGGACATCATCGACCTCCAGACCGAGGTCTGAG	8	+	143566033-143566082	8q24.3e	Homo sapiens brain-specific angiogenesis inhibitor 1 (BAI1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9647739] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10343108] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9647739] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 9647739] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9647739] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9647739] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [pmid 10343108] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [pmid 10343108] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7531056] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10343108] [evidence TAS];  [goid 16527] [evidence IEA]	FLJ41988	
Homo sapiens	RefSeq	NM_001702.1	ILMN_161986	BAI1	NM_001702.2	NM_001702.2		575	111118993	NM_001702.2	BAI1	NP_001693.2	ILMN_1763869	0006380711	I	2944	TGCCTCTGTGACCGGCTCTCCACCTTCGCCATCTTAGCCCAGCTCAGCGC	8	+	143557756-143557805	8q24.3e	Homo sapiens brain-specific angiogenesis inhibitor 1 (BAI1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9647739] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10343108] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9647739] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 9647739] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9647739] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9647739] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [pmid 10343108] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [pmid 10343108] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7531056] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10343108] [evidence TAS];  [goid 16527] [evidence IEA]	FLJ41988	
Homo sapiens	RefSeq	NM_015462.2	ILMN_5347	NOL11	NM_015462.3	NM_015462.3		25926	142378677	NM_015462.3	NOL11	NP_056277.2	ILMN_1688971	0002630161	S	2249	GCGACCATCTCAGTGTCAAGAGAAACGTGTCAGTGAGTACCTGGACCATC	17	+	63170523-63170572	17q24.2b	Homo sapiens nucleolar protein 11 (NOL11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			DKFZP586L0724	DKFZP586L0724
Homo sapiens	RefSeq	XM_943611.1	ILMN_41496	LOC649189	XM_943611.1	XM_943611.1		649189	88968701	XM_943611.1	LOC649189	XP_948704.1	ILMN_1747004	0004540524	S	1929	GAGTGTTTCAGCAAGTGCAGAGATGCCCAGGTGGTTGGGATTCAATACAT					PREDICTED: Homo sapiens hypothetical protein LOC649189 (LOC649189), mRNA.					
Homo sapiens	RefSeq	XM_936040.1	ILMN_37215	LOC653857	XM_936040.1	XM_936040.1		653857	89027627	XM_936040.1	LOC653857	XP_941133.1	ILMN_1745239	0006370204	I	867	TGTACAAGAGTTGCAGTTGTTCGTCTTAACCCAGACTTGGTGTGTGGTGG				7q36.1c	PREDICTED: Homo sapiens similar to actin-related protein 3-beta, transcript variant 2 (LOC653857), mRNA.					
Homo sapiens	RefSeq	NM_003680.2	ILMN_13503	YARS	NM_003680.2	NM_003680.2		8565	38202242	NM_003680.2	YARS	NP_003671.1	ILMN_1766010	0003520040	S	3038	GGGTGGGGTACTTCTCCATAAGGCATCTCAGTCAAATCCCCATCACTGTC	1	-	33013456-33013505	1p35.1b	Homo sapiens tyrosyl-tRNA synthetase (YARS), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10102815] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9162081] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9162081] [evidence TAS]	The process of coupling tyrosine to tyrosyl-tRNA, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6437] [pmid 9162081] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10102815] [evidence TAS]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-tyrosine + tRNA(Tyr) = AMP + diphosphate + L-tyrosyl-tRNA(Tyr) [goid 4831] [pmid 9162081] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10102815] [evidence NAS]; Interacting selectively with the interleukin-8 receptor [goid 5153] [pmid 10102815] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	CMTDIC; YTS; TYRRS; YRS	CMTDIC; YTS; TYRRS; YRS
Homo sapiens	Unigene	Hs.157344	ILMN_79403	HS.157344	Hs.157344		Hs.157344		21733442	AL832858			ILMN_1824666	0006900601	S	2072	TCCCACAGTTGGTAGTGCCAGGCAGGAAGCAGGAGTGCAGGTTGCAGGAA					Homo sapiens mRNA; cDNA DKFZp667A182 (from clone DKFZp667A182)					
Homo sapiens	RefSeq	XM_929681.1	ILMN_41575	LOC646734	XM_929681.1	XM_929681.1		646734	89029216	XM_929681.1	LOC646734	XP_934774.1	ILMN_1795312	0000060402	S	406	AGTGTTACAGCTCGATTAGAGAAACGTGCGGACCCAAAGAGCGTGGGGCG	9	+	30065165-30065214		PREDICTED: Homo sapiens similar to integrin, beta 6 (LOC646734), mRNA.					
Homo sapiens	RefSeq	XR_018952.1	ILMN_173619	LOC391636	XR_018952.1	XR_018952.1		391636	113416041	XR_018952.1	LOC391636		ILMN_3294217	0003060209	M	711	AGACTCTTGAGGGTAGGCGACACGGAGAAGCTAGGTGACACAGAGAAGGC				4p15.33b	PREDICTED: Homo sapiens misc_RNA (LOC391636), miscRNA.					
Homo sapiens	RefSeq	NR_029897.1	ILMN_388275	MIR338	NR_029897.1	NR_029897.1		442906	262206368	NR_029897.1	MIR338		ILMN_3311040	0007150400	S	14	CTGGTGCTGAGTGATGACTCAGGCGACTCCAGCATCAGTGATTTTGTTGA				17q25.3f	Homo sapiens microRNA 338 (MIR338), microRNA.					
Homo sapiens	RefSeq	NM_001033113.1	ILMN_180597	ENTPD8	NM_001033113.1	NM_001033113.1		377841	110431367	NM_001033113.1	ENTPD8	NP_001028285.1	ILMN_2416019	0004850685	A	1870	AACCTCCTTCCGCAACTGGGCTTCCAGGGCCGTAGGTGCCTTTCTGCACA	9	-	140329118-140329167	9q34.3f	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 8 (ENTPD8), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	GLSR2492; UNQ2492; NTPDase-8	GLSR2492; UNQ2492; NTPDase-8
Homo sapiens	RefSeq	NM_001033113.1	ILMN_180597	ENTPD8	NM_001033113.1	NM_001033113.1		377841	110431367	NM_001033113.1	ENTPD8	NP_001028285.1	ILMN_2298988	0006940068	I	1280	TCCAGGCAGCCCCTGAGCACGGTCAACGCCACCATCTGGGAGTTTTGCCA	9	-	140330186-140330235	9q34.3f	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 8 (ENTPD8), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	GLSR2492; UNQ2492; NTPDase-8	GLSR2492; UNQ2492; NTPDase-8
Homo sapiens	RefSeq	XM_945045.1	ILMN_34833	LOC649679	XM_945045.1	XM_945045.1		649679	88981262	XM_945045.1	LOC649679	XP_950138.1	ILMN_1676036	0006550274	A	1118	GCGAGGGCATGGATGAGATGGAATTCACTGAGGCCGAGAGCAACATGAAT					PREDICTED: Homo sapiens similar to Tubulin beta-4q chain, transcript variant 2 (LOC649679), mRNA.					
Homo sapiens	RefSeq	NM_152765.2	ILMN_7220	C8ORF46	NM_152765.2	NM_152765.2		254778	34303955	NM_152765.2	C8orf46	NP_689978.1	ILMN_1657149	0004570341	S	2610	GGCCTGGGCCTCTGGGATTCCACCTTGCTATCTCTGCTCTTCAACCATTG	8	+	67592734-67592783	8q13.1b	Homo sapiens chromosome 8 open reading frame 46 (C8orf46), mRNA.				MGC33510	MGC33510
Homo sapiens	RefSeq	NM_001409.3	ILMN_182966	MEGF6	NM_001409.3	NM_001409.3		1953	110347456	NM_001409.3	MEGF6	NP_001400.3	ILMN_3241441	0006590220	S	7039	CCCGCTCAGTGAAGACACAGTGTTCAGCTACGGAAGCCATAAGGCAGGCC	1	-	3409272-3409321	1p36.32b	Homo sapiens multiple EGF-like-domains 6 (MEGF6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]	KIAA0815; EGFL3	KIAA0815; EGFL3
Homo sapiens	RefSeq	XM_941859.1	ILMN_168392	LOC732387	XR_015868.1	XR_015868.1		732387	113422840	XR_015868.1	LOC732387		ILMN_1715185	0005890598	S	532	GCAATCAGAGCTGAATATCAGAAGATGCCTGCATTTCTCCATGAAGAAGA					PREDICTED: Homo sapiens similar to ring finger protein 18 (LOC732387), mRNA.					
Homo sapiens	Unigene	Hs.547824	ILMN_109653	HS.547824	Hs.547824		Hs.547824		13572203	BG564551			ILMN_1898826	0001050338	S	416	CTCACCCTGTTCTCACACAGGCAATCACACCATCACGGGAAACTCCAAGG	9	-	33006192-33006241		602584229F1 NIH_MGC_76 Homo sapiens cDNA clone IMAGE:4712142 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001715233.1	ILMN_339483	LOC100133275	XM_001715233.1	XM_001715233.1		100133275	169171705	XM_001715233.1	LOC100133275	XP_001715285.1	ILMN_3204667	0003940019	A	432	TCATCAACACCAGAGAGAAGTTTGGAGAAGGCTGCTCTGTGTTGTCCATT				7p12.3a	PREDICTED: Homo sapiens hypothetical protein LOC100133275 (LOC100133275), mRNA.					
Homo sapiens	RefSeq	NM_001031692.1	ILMN_162504	LRRC17	NM_005824.1	NM_005824.1		10234	5031970	NM_005824.1	LRRC17	NP_005815.1	ILMN_1652826	0004480035	A	1826	GAATGCTATCATCCTGCTTGCCTGTCCATTTGTGGAACAGCATCTGGTGA	7	+	102372456-102372505	7q22.1f	Homo sapiens leucine rich repeat containing 17 (LRRC17), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	P37NB	P37NB
Homo sapiens	RefSeq	NM_005824.1	ILMN_162504	LRRC17	NM_005824.1	NM_005824.1		10234	5031970	NM_005824.1	LRRC17	NP_005815.1	ILMN_1674793	0005050102	I	1210	GGTCTTTGAGATGAAACCCTGCAAGTAGACTTACGTGAATGATTTTTGCT	7	+	102369973-102369986:102369987-102370022	7q22.1f	Homo sapiens leucine rich repeat containing 17 (LRRC17), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	P37NB	P37NB
Homo sapiens	Unigene	Hs.583920	ILMN_136101	HS.583920	Hs.583920		Hs.583920		4188949	AI379096			ILMN_1892391	0006060743	S	425	GAGCCTGAAGTTGTGGTCTGGTGAGTTGCTGTAACAATCTGCACGGTGGC	8	-	37125603-37125637:37143771-37143785		tc59d07.x1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:2068909 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005868.3	ILMN_4222	BET1	NM_005868.4	NM_005868.4		10282	83779007	NM_005868.4	BET1	NP_005859.1	ILMN_1684042	0001510746	S	856	GGAAACTTAGTGGGAGAGTAACAGAATGCCTGGAGAGCCTGACTCTGAGC	7	-	93623155-93623204	7q21.3a	Homo sapiens blocked early in transport 1 homolog (S. cerevisiae) (BET1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 8621431] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 8621431] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	HBET1; DKFZp781C0425	hbet1; DKFZp781C0425
Homo sapiens	RefSeq	XM_931546.1	ILMN_34558	SETD5	XM_944303.2	XM_944303.2		55209	113414898	XM_944303.2	SETD5	XP_949396.1	ILMN_1654637	0006350768	S	241	CGGCAGCGCCTGGGACAAGGTCTTCAGAACTACTAGCAGATAATTTGGGG				3p25.3c	PREDICTED: Homo sapiens SET domain containing 5, transcript variant 39 (SETD5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	Unigene	Hs.335002	ILMN_86616	HS.335002	Hs.335002		Hs.335002		3798299	AI218484			ILMN_1848474	0002850671	S	127	ATGAGGTGGCTGGTTTTTCATGGCTTGACTATTCCCACGGAGCAGGCATC	18	-	71315192-71315241		qh27h05.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1845945 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003592.2	ILMN_177590	CUL1	NM_003592.2	NM_003592.2		8454	32307160	NM_003592.2	CUL1	NP_003583.2	ILMN_1749629	0000070601	S	2888	CGCCATTTACCCTAATTTAAGAACAGCGGGGACTGACCCTCCGTGCCGAG	7	+	148128814-148128863	7q36.1a	Homo sapiens cullin 1 (CUL1), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11231585] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15469984] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12820959] [evidence EXP]; A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1) [goid 19005] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 8681378] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8681378] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8681378] [evidence TAS]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [pmid 8681378] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12504025] [evidence IPI]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	MGC149835; MGC149834	MGC149835; MGC149834
Homo sapiens	RefSeq	NM_001002923.1	ILMN_7748	IGFL4	NM_001002923.1	NM_001002923.1		444882	50897295	NM_001002923.1	IGFL4	NP_001002923.1	ILMN_1717695	0005700239	S	374	TCTGTGCCCAGGAATACCACCCAAAAAGCCCTGTGTCAAGATCTGACCTC	19	-	51234995-51235034:51235255-51235264	19q13.32a	Homo sapiens IGF-like family member 4 (IGFL4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	RefSeq	XM_939516.1	ILMN_39078	LOC650428	XM_939516.2	XM_939516.2		650428	113431169	XM_939516.2	LOC650428	XP_944609.1	ILMN_1810880	0003370553	S	24	ACCTCATGAGCATCTCTACTTCCCCCAGTGTGAGGAGATGAAGGCCACGG					PREDICTED: Homo sapiens similar to keratin, hair, basic, 6 (LOC650428), mRNA.					
Homo sapiens	RefSeq	NM_080720.1	ILMN_7930	H2AFB3	NM_080720.1	NM_080720.1		83740	63029934	NM_080720.1	H2AFB3	NP_542451.1	ILMN_1692715	0003140347	S	472	AAGTCTTGGGCCTTCATTAATTCTGTCAATAAAATGTTTCAAGGAAAAAA	X	-	154342786-154342790:154689080-154689124	Xq28h	Homo sapiens H2A histone family, member B3 (H2AFB3), mRNA.				H2AFB; H2AFB2; H2ABBD	H2AFB; H2AFB2; H2ABBD
Homo sapiens	RefSeq	XR_039494.1	ILMN_348127	LOC100129359	XR_039494.1	XR_039494.1		100129359	169215799	XR_039494.1	LOC100129359		ILMN_3268214	0003140278	M	402	AGAGCACTTCTATGGGGAAATCCTGAGTGTGGCCGTTGTTGGCTACCTCA				22q13.2a	PREDICTED: Homo sapiens misc_RNA (LOC100129359), miscRNA.					
Homo sapiens	RefSeq	XM_930681.1	ILMN_137316	C1R	XM_930681.1	XM_930681.1		715	89035252	XM_930681.1	C1R	XP_935774.1	ILMN_1656242	0000110730	I	647	GAGTGACCTCCCTAAGATCAGAGCCACTACTCAGGTCTCCCAGCAGAAGC	12	-	7133498-7133546:7133547-7133547	12p13.31d	PREDICTED: Homo sapiens complement component 1, r subcomponent, transcript variant 3 (C1R), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1249422] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 814163] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2834284] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	XM_001723069.1	ILMN_344575	LOC100128765	XM_001723069.1	XM_001723069.1		100128765	169206382	XM_001723069.1	LOC100128765	XP_001723121.1	ILMN_3187530	0004730202	A	496	CTCTCTGGGATGGCCTCTGTTGTCGGTCACAGTTCCTTCAGCTTGTGAGA				13q12.11a	PREDICTED: Homo sapiens similar to hCG2041516 (LOC100128765), mRNA.					
Homo sapiens	RefSeq	XM_001130365.2	ILMN_171780	LOC728622	XM_001130365.2	XM_001130365.2		728622	169204255	XM_001130365.2	LOC728622	XP_001130365.2	ILMN_3301353	0004540470	M	824	TGGGAAGCCCAGGTACACCAAGAGAACCAGCAGTGTGAAGAGAAGGATTG	12	+	17034089-17034130:17034165-17034172	12p12.3c	PREDICTED: Homo sapiens similar to S-phase kinase-associated protein 1A (p19A) (LOC728622), mRNA.					
Homo sapiens	RefSeq	NM_003835.2	ILMN_7519	RGS9	NM_003835.2	NM_003835.2		8787	126365760	NM_003835.2	RGS9	NP_003826.2	ILMN_2389984	0004390138	A	2100	GAAAAGGAGGTCATCTGCCCCTGGGAGAGCCTGTAAGGAAAGAGGCAGGC	17	+	60653952-60653987:60653988-60654001	17q24.1a	Homo sapiens regulator of G-protein signaling 9 (RGS9), transcript variant 1, mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9765512] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9765512] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PERRS; RGS9L; MGC26458; MGC111763	PERRS; RGS9L; MGC111763; MGC26458
Homo sapiens	RefSeq	NM_006694.2	ILMN_10094	JTB	NM_006694.2	NM_006694.2		10899	38455406	NM_006694.2	JTB	NP_006685.1	ILMN_2206716	0000070044	S	1041	TTGGAAGTTCGAAGGGGCTGTCGTGTGTGTGGCCCTGATCTTCGCTTGTC	1	-	152213852-152213901	1q21.3d	Homo sapiens jumping translocation breakpoint (JTB), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10321732] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10321732] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]			B PAR; PAR; HJTB; hJT; HSPC222	B PAR; PAR; HJTB; hJT; HSPC222
Homo sapiens	RefSeq	NM_014755.1	ILMN_4347	SERTAD2	NM_014755.1	NM_014755.1		9792	7661925	NM_014755.1	SERTAD2	NP_055570.1	ILMN_1651347	0002070367	S	5345	GGAGGTATAACCTTTCCCCCACAGACCTGAGAGCTGTGCCTTTTCTATGC	2	-	64712412-64712461	2p14c	Homo sapiens SERTA domain containing 2 (SERTAD2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16098148] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16098148] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 16098148] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Sei-2; TRIP-Br2; MGC126688; MGC126690	TRIP-Br2; MGC126688; Sei-2; MGC126690
Homo sapiens	RefSeq	XM_379298.3	ILMN_33426	LOC401164	XM_379298.3	XM_379298.3		401164	88978344	XM_379298.3	LOC401164	XP_379298.3	ILMN_1740942	0000270064	A	446	TGATATCCCCGTGACAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAG	4	+	189635883-189635932		PREDICTED: Homo sapiens hypothetical gene supported by AY494056 (LOC401164), mRNA.					
Homo sapiens	RefSeq	NM_213653.2	ILMN_25077	HFE2	NM_213653.2	NM_213653.2		148738	56790895	NM_213653.2	HFE2	NP_998818.1	ILMN_1760985	0002900136	I	275	TCCCATGGCAGTCCCCCAACTCTAAGCACTCTCACTCTCCTGCTGCTCCT	1	+	144126175-144126224	1q21.1b	Homo sapiens hemochromatosis type 2 (juvenile) (HFE2), transcript variant a, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			HFE2A; MGC23953; RGMC; JH; HJV	HFE2A; MGC23953; RGMC; JH; HJV
Homo sapiens	RefSeq	XM_926081.1	ILMN_43945	LOC642602	XM_926081.1	XM_926081.1		642602	89028316	XM_926081.1	LOC642602	XP_931174.1	ILMN_1709910	0007560131	S	191	GGCTACCCAGGCGGAGAACGATCAAATTCAAGAATGCTGAGAGAGGACAC	8	-	145187836-145187841:145190591-145190634		PREDICTED: Homo sapiens similar to spermatogenesis and centriole associated 1 (LOC642602), mRNA.					
Homo sapiens	RefSeq	NM_032786.1	ILMN_14237	ZC3H10	NM_032786.1	NM_032786.1		84872	14249451	NM_032786.1	ZC3H10	NP_116175.1	ILMN_2075847	0002140026	S	1945	GGGTCCTAGTTGCTTGGGTTGGACAATACAGGAATTGCTTCTGGGCCCTG	12	+	54802369-54802418	12q13.2c	Homo sapiens zinc finger CCCH-type containing 10 (ZC3H10), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14451; ZC3HDC10	FLJ14451; ZC3HDC10
Homo sapiens	RefSeq	NM_153029.3	ILMN_23393	N4BP1	NM_153029.3	NM_153029.3		9683	48928018	NM_153029.3	N4BP1	NP_694574.3	ILMN_1706225	0000070743	S	5704	GGTGTCTCTGGCTCACCTCCGTCTGTTCATCACCTTCCTCCCCAGTGTTT	16	-	48573989-48574038	16q12.1b	Homo sapiens NEDD4 binding protein 1 (N4BP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			KIAA0615; FLJ31821	KIAA0615; FLJ31821
Homo sapiens	Unigene	Hs.541845	ILMN_105964	HS.541845	Hs.541845		Hs.541845		3849596	AI253067			ILMN_1869119	0000240184	S	360	GGAAGGTTGAGTTCTGGGGCATCATGGATGAGGACTGGAGAGCCAGAGCC	2	-	110533857-110533906		qz37c09.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2029072 3, mRNA sequence					
Homo sapiens	RefSeq	NM_007083.3	ILMN_903	NUDT6	NM_007083.3	NM_007083.3		11162	37594465	NM_007083.3	NUDT6	NP_009014.2	ILMN_2366972	0003710088	A	407	GACTCTGTGGCTGAGAGAAGGGCCCAGCAGATTACCAGGATATGCTTCAC	4	-	124058123-124058172	4q28.1a	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 6 (NUDT6), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 7984147] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ASFGF2; gfg-1; FGF-AS; bFGF; FGF2AS; FGF-2; gfg	ASFGF2; gfg-1; FGF-AS; bFGF; FGF2AS; FGF-2; gfg
Homo sapiens	RefSeq	NM_007083.3	ILMN_903	NUDT6	NM_007083.3	NM_007083.3		11162	37594465	NM_007083.3	NUDT6	NP_009014.2	ILMN_1665192	0007150039	A	320	CATTCCCATCCTCCAAAGCCGATTTATTGCCCCTGCTGCTTCCCTGGGCT	4	-	124058210-124058259	4q28.1a	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 6 (NUDT6), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 7984147] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ASFGF2; gfg-1; FGF-AS; bFGF; FGF2AS; FGF-2; gfg	ASFGF2; gfg-1; FGF-AS; bFGF; FGF2AS; FGF-2; gfg
Homo sapiens	RefSeq	NM_007083.3	ILMN_903	NUDT6	NM_007083.3	NM_007083.3		11162	37594465	NM_007083.3	NUDT6	NP_009014.2	ILMN_1780659	0003360743	I	152	AGTTGGAGCGTGCGATCTGCAGGGCGAGCTGGACAGATTCGGGGGCATCT	4	-	124063008-124063057	4q28.1a	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 6 (NUDT6), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 7984147] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ASFGF2; gfg-1; FGF-AS; bFGF; FGF2AS; FGF-2; gfg	ASFGF2; gfg-1; FGF-AS; bFGF; FGF2AS; FGF-2; gfg
Homo sapiens	RefSeq	NM_014303.2	ILMN_12832	PES1	NM_014303.2	NM_014303.2		23481	22091458	NM_014303.2	PES1	NP_055118.1	ILMN_1656372	0001500066	S	2181	CCGTGATTCTCAGGGTGCTGTGATGGGGTGAGGGTAGGGGGAGCATTTGT	22	-	30972643-30972692	22q12.2b	Homo sapiens pescadillo homolog 1, containing BRCT domain (zebrafish) (PES1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8985183] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	PES	PES
Homo sapiens	RefSeq	NM_032288.5	ILMN_5397	FYTTD1	NM_032288.5	NM_032288.5		84248	58374126	NM_032288.5	FYTTD1	NP_115664.2	ILMN_2389935	0006290608	A	1051	CCTGAAGGAACAAAGAGCCACTCTCACATACAACAAAGGGGGAAGCCGCT	3	+	198993111-198993160	3q29i	Homo sapiens forty-two-three domain containing 1 (FYTTD1), transcript variant 1, mRNA.				DKFZp761B1514	DKFZp761B1514
Homo sapiens	Unigene	Hs.571047	ILMN_123228	HS.571047	Hs.571047		Hs.571047		31446989	CD515271			ILMN_1908898	0006130072	S	386	CTGGCTCCAGCACATTTCCAATTCATACTCTGCTGTCAAGGGTACATCAG	6	+	149339244-149339293		AGENCOURT_14364958 NIH_MGC_181 Homo sapiens cDNA clone IMAGE:30408213 5, mRNA sequence					
Homo sapiens	RefSeq	NM_173581.1	ILMN_168844	FLJ90231	XM_001131501.1	XM_001131501.1		112937	113423184	XM_001131501.1	FLJ90231	XP_001131501.1	ILMN_1789048	0005960326	S	3367	CCACCACTCCCGGCCGTGAACATATTTTTTGGGTTGCTGGAGTTCATCTA				11q25e	PREDICTED: Homo sapiens hypothetical protein FLJ90231 (FLJ90231), mRNA.					
Homo sapiens	RefSeq	NM_138416.1	ILMN_168844	FLJ90231	XM_001131501.1	XM_001131501.1		112937	113423184	XM_001131501.1	FLJ90231	XP_001131501.1	ILMN_1731912	0006940180	S	1836	GGCCCTGCTGAGAAGAGGGATTGTGGAGCTTCTCTTGACCTCTGATGGTG				11q25e	PREDICTED: Homo sapiens hypothetical protein FLJ90231 (FLJ90231), mRNA.					
Homo sapiens	RefSeq	NM_002014.2	ILMN_9429	FKBP4	NM_002014.2	NM_002014.2		2288	17149846	NM_002014.2	FKBP4	NP_002005.1	ILMN_1782045	0002100750	S	2074	TCCCTGTTCTGGTATTTCCCCTGTCAGTTTCCCCTCTCGGCCAGGTTGTG	12	+	2783226-2783275	12p13.33a	Homo sapiens FK506 binding protein 4, 59kDa (FKBP4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 2378870] [evidence TAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 1279700] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a steroid hormone receptor complex, an intracellular receptor that binds steroid hormones. The complex is often a dimer, and forms after the steroid has bound the receptor [goid 6463] [evidence IEA]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IEA]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IEA]; The establishment of the sex of a male organism by physical differentiation [goid 46661] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with the immunosuppressant FK506 [goid 5528] [pmid 1376003] [evidence TAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 2378870] [evidence TAS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with a glucocorticoid receptor [goid 35259] [evidence IEA]; Interacting selectively with a phosphorylated protein [goid 51219] [evidence IEA]	Hsp56; FKBP52; FKBP59; PPIase; p52; HBI	FKBP52; FKBP59; PPIase; Hsp56; p52; HBI
Homo sapiens	RefSeq	NM_032569.2	ILMN_13959	N-PAC	NM_032569.2	NM_032569.2		84656	40556375	NM_032569.2	N-PAC	NP_115958.2	ILMN_1703153	0007100424	S	3286	TTCTGTCTGAACACAAGCCTGTTCTAGTCCTGGCGGAACACACTGGGGGT	16	-	4793582-4793631	16p13.3b	Homo sapiens cytokine-like nuclear factor n-pac (N-PAC), mRNA.				HIBDL; NP60; BM045	HIBDL; NP60; BM045
Homo sapiens	Unigene	Hs.561108	ILMN_114661	HS.561108	Hs.561108		Hs.561108		1549566	AA057856			ILMN_1861874	0000510408	S	275	GCCTGGCTCGAGACTTAAGAGACAAATAGATGGCACAGGCACAAGCGTGT	3	-	170961779-170961828		zk79a05.r1 Soares_pregnant_uterus_NbHPU Homo sapiens cDNA clone IMAGE:489008 5, mRNA sequence					
Homo sapiens	RefSeq	NM_014858.2	ILMN_28834	TMCC2	NM_014858.2	NM_014858.2		9911	54792739	NM_014858.2	TMCC2	NP_055673.2	ILMN_1659024	0003840156	S	3446	TCCATTTAGCCTTTGGATCATCCTGGCTGGGAGAAGTGGGACCGAGCCAC	1	+	203508747-203508796	1q32.1g	Homo sapiens transmembrane and coiled-coil domain family 2 (TMCC2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HUCEP11; FLJ38497; KIAA0481	HUCEP11; FLJ38497; KIAA0481
Homo sapiens	RefSeq	NM_152269.1	ILMN_11384	C12ORF65	NM_152269.2	NM_152269.2		91574	142387465	NM_152269.2	C12orf65	NP_689482.1	ILMN_1667510	0002320392	S	1882	GGGAAGGAGTTGTCATTGTGATGAGGCACTTGGAGGGGTTCTGGGGTGCC	12	+	122308268-122308317	12q24.31d	Homo sapiens chromosome 12 open reading frame 65 (C12orf65), mRNA.		The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence IEA]	Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence IEA]	FLJ38663	FLJ38663
Homo sapiens	RefSeq	XM_935536.1	ILMN_137147	FLJ20397	XM_935536.1	XM_935536.1		54919	89026626	XM_935536.1	FLJ20397	XP_940629.1	ILMN_1656615	0000060438	I	9	CAGCTTTGCTGCAGTTTTCCTGCTCGATGTGTGCTGCTGGTGAGGCCACC				7p22.3c	PREDICTED: Homo sapiens hypothetical protein FLJ20397, transcript variant 3 (FLJ20397), mRNA.					
Homo sapiens	RefSeq	XR_017499.2	ILMN_176988	LOC647211	XR_017499.2	XR_017499.2		647211	169209930	XR_017499.2	LOC647211		ILMN_3236093	0000050092	S	1957	TGGGGCACCAGAAAGAACAGACAGAAGTCAGCCAGCAACTTGTGCCTCCC	16	+	33332381-33332430	16p11.2a	PREDICTED: Homo sapiens misc_RNA (LOC647211), miscRNA.					
Homo sapiens	RefSeq	NM_181783.1	ILMN_1847	TMTC3	NM_181783.1	NM_181783.1		160418	32401450	NM_181783.1	TMTC3	NP_861448.1	ILMN_2119555	0007000286	S	4593	CTGATACCAGTGGGAGTTGGTCTTGATCTAGGAGATTCTGTTAAGCATCC	12	+	87115213-87115262	12q21.32a	Homo sapiens transmembrane and tetratricopeptide repeat containing 3 (TMTC3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZp686M1969; FLJ90492; DKFZp686O2342; DKFZp686O22167; DKFZp686C0968; SMILE	DKFZp686M1969; FLJ90492; DKFZp686O2342; DKFZp686O22167; DKFZp686C0968; SMILE
Homo sapiens	RefSeq	NM_006035.2	ILMN_167010	CDC42BPB	NM_006035.3	NM_006035.3		9578	115527096	NM_006035.3	CDC42BPB	NP_006026.3	ILMN_1689989	0004200703	S	6335	CCCTTTGTACCAGATGTTGAGTGACCAGCTCTGTGGCCCTGTGTCGTCAG	14	-	103399032-103399081	14q32.32a	Homo sapiens CDC42 binding protein kinase beta (DMPK-like) (CDC42BPB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9418861] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [evidence ISS]; The area of a motile cell closest to the direction of movement [goid 31252] [evidence ISS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 9418861] [evidence TAS]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 9418861] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence ISS]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	KIAA1124; MRCKB	KIAA1124; MRCKB
Homo sapiens	RefSeq	XM_001715272.1	ILMN_350939	LOC100134022	XM_001715272.1	XM_001715272.1		100134022	169168967	XM_001715272.1	LOC100134022	XP_001715324.1	ILMN_3248104	0002630524	S	3	GTCTCTAGGGAGCCCGCTCAGGCCTCAGCCAGCACAGAGAGGGGCTCCCA					PREDICTED: Homo sapiens hypothetical protein LOC100134022 (LOC100134022), mRNA.					
Homo sapiens	RefSeq	NM_171982.2	ILMN_7782	TRIM35	NM_171982.2	NM_171982.2		23087	70608087	NM_171982.2	TRIM35	NP_741983.1	ILMN_1740389	0001780056	I	577	GACAAAGACAAGGCTCCAAACCAGCTCTCCTAACCTTCAGTCCAGGAGGC	8	-	27218197-27218246	8p21.2a	Homo sapiens tripartite motif-containing 35 (TRIM35), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HLS5; MGC17233; KIAA1098; MAIR	HLS5; MGC17233; KIAA1098; MAIR
Homo sapiens	RefSeq	NM_000261.1	ILMN_13249	MYOC	NM_000261.1	NM_000261.1		4653	4557778	NM_000261.1	MYOC	NP_000252.1	ILMN_2052335	0001940037	S	1135	TTCTTGGGGTGGCTACACGGACATTGACTTGGCTGTGGATGAAGCAGGCC	1	-	171605417-171605466	1q24.3b	Homo sapiens myocilin, trabecular meshwork inducible glucocorticoid response (MYOC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 17317787] [evidence IDA]; The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae [goid 5791] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9169133] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9169133] [evidence TAS]	JOAG1; JOAG; GPOA; myocilin; GLC1A; TIGR	JOAG1; JOAG; GPOA; myocilin; GLC1A; TIGR
Homo sapiens	RefSeq	NM_000261.1	ILMN_13249	MYOC	NM_000261.1	NM_000261.1		4653	4557778	NM_000261.1	MYOC	NP_000252.1	ILMN_2052331	0005390576	S	1624	GGGCCCAGGCAGCTTTGACTGCTTTCCAAGTTTTCATTAATCCAGAAGGA	1	-	171604928-171604977	1q24.3b	Homo sapiens myocilin, trabecular meshwork inducible glucocorticoid response (MYOC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 17317787] [evidence IDA]; The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae [goid 5791] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9169133] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9169133] [evidence TAS]	JOAG1; JOAG; GPOA; myocilin; GLC1A; TIGR	JOAG1; JOAG; GPOA; myocilin; GLC1A; TIGR
Homo sapiens	Unigene	Hs.120863	ILMN_75678	HS.120863	Hs.120863		Hs.120863		27825904	BX088983			ILMN_1869034	0000830021	S	145	CAGTGGGATGAGATGGACTTAGGGGAATTGGGGTTAGAACTTGAGGGTTA	12	-	46520834-46520883		BX088983 Soares_parathyroid_tumor_NbHPA Homo sapiens cDNA clone IMAGp998K073119 ; IMAGE:1240062, mRNA sequence					
Homo sapiens	RefSeq	NM_016322.2	ILMN_17628	RAB14	NM_016322.2	NM_016322.2		51552	19923482	NM_016322.2	RAB14	NP_057406.2	ILMN_1735765	0006250133	S	3833	CAGGCCCAGAAAATTGTGTCCCAGAAGGATGTCAGTAATTGTGACTAGGC	9	-	122980443-122980492	9q33.2a	Homo sapiens RAB14, member RAS oncogene family (RAB14), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence ISS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISS]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence ISS]; The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae [goid 5791] [evidence ISS]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISS]; The continuous network of membranes encompassing the outer nuclear membrane and the endoplasmic reticulum [goid 42175] [evidence ISS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISS]	The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [pmid 15004230] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence NAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 15004230] [evidence NAS]; The directed movement of substances within a cell [goid 46907] [pmid 15004230] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 15004230] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FBP; RAB-14	FBP; RAB-14
Homo sapiens	RefSeq	XR_037707.1	ILMN_336632	LOC729222	XR_037707.1	XR_037707.1		729222	169204629	XR_037707.1	LOC729222		ILMN_3298447	0002450593	M	883	AAAAAAGGCGAGTCGGACCGACCCAGCCACCGAGAAGCCGAGGAGGCAAG				12p11.23a	PREDICTED: Homo sapiens misc_RNA (LOC729222), miscRNA.					
Homo sapiens	RefSeq	XM_929544.1	ILMN_40624	LOC653392	XM_929544.1	XM_929544.1		653392	89025210	XM_929544.1	LOC653392	XP_934637.1	ILMN_1777539	0002810593	S	181	TACCGGGCAGGAGTCCCAAGATGAGGTGAGAGGGGAAGGAACTGAAAAGG	7	-	75205740-75205789		PREDICTED: Homo sapiens similar to huntingtin interacting protein 1 (LOC653392), mRNA.					
Homo sapiens	RefSeq	XM_934422.1	ILMN_2960	DLEU2	NR_002612.1	NR_002612.1		8847	83816916	NR_002612.1	DLEU2		ILMN_1784046	0004480487	A	2357	GGCGTGAGCCACCGTACCCGGCCCAGAATCTTTGCCTTTTGTTTGCATAG	13	-	50557049-50557098	13q14.3a	Homo sapiens deleted in lymphocytic leukemia 2 (non-protein coding) (DLEU2), non-coding RNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]		MGC88287; 1B4; LEU2; DLB2; RFP2OS; TRIM13OS; BCMSUN	
Homo sapiens	RefSeq	XM_928601.1	ILMN_38864	LOC645585	XM_928601.1	XM_928601.1		645585	89025634	XM_928601.1	LOC645585	XP_933694.1	ILMN_1686618	0001940091	S	3	GGAGGACACAGTGGGCAGTCCACTCAACGTGGACAAGTACAGGTTTGAAT	7	-	49134-49183		PREDICTED: Homo sapiens similar to Platelet-derived growth factor A chain precursor (PDGF A-chain) (Platelet-derived growth factor alpha polypeptide) (PDGF-1) (LOC645585), mRNA.					
Homo sapiens	RefSeq	Hs.569155	ILMN_174916	LOC729025	XM_001129090.1	XM_001129090.1		729025	113423280	XM_001129090.1	LOC729025	XP_001129090.1	ILMN_1882041	0001070040	S	549	CTCCTGAAGGCCAAAAGCACCCAGTGGACAGACGATGGCTCTTACGCCTC	12	-	16302057-16302071:16316762-16316796	12p12.3d	PREDICTED: Homo sapiens similar to peptide/histidine transporter (LOC729025), mRNA.					
Homo sapiens	RefSeq	NM_033455.1	ILMN_26394	KCNK7	NM_033455.1	NM_033455.1		10089	16118234	NM_033455.1	KCNK7	NP_258416.1	ILMN_2304577	0001340465	A	895	GCAGCCTGCACCCCGTGATTTACCACCTGGGCCAGCTCGCACTTCTTGGT	11	-	65360852-65360854:65360947-65360993	11q13.1d	Homo sapiens potassium channel, subfamily K, member 7 (KCNK7), transcript variant D, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10206991] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [pmid 10206991] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	K2p7.1; TWIK3; MGC118784; MGC118782	K2p7.1; TWIK3; MGC118784; MGC118782
Homo sapiens	RefSeq	NM_001004700.1	ILMN_162392	OR4C11	NM_001004700.1	NM_001004700.1		219429	52317231	NM_001004700.1	OR4C11	NP_001004700.1	ILMN_1740816	0000070392	S	665	CACTGAGAAACCACAGTGCCAAAGGGAAGAAAAAGGCTCTCTCCGCTTGC	11	-	55371135-55371184	11q11b	Homo sapiens olfactory receptor, family 4, subfamily C, member 11 (OR4C11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-136; OR4C11P	OR11-136; OR4C11P
Homo sapiens	RefSeq	XM_001720996.1	ILMN_341041	LOC100132460	XM_001720996.1	XM_001720996.1		100132460	169216716	XM_001720996.1	LOC100132460	XP_001721048.1	ILMN_3240510	0001740053	S	1739	CACTGCAAATTCGTGAACTCACAGGCCACTAATGGCCCATAAAAGTTGCC	X	+	148850029-148850078	Xq28b	PREDICTED: Homo sapiens similar to LOC100126053 protein (LOC100132460), mRNA.					
Homo sapiens	RefSeq	XM_935778.3	ILMN_32582	LOC402269	XM_935778.3	XM_935778.3		402269	169170459	XM_935778.3	LOC402269	XP_940871.1	ILMN_3250606	0000290753	M	696	CCAATTCAGGTCCAGATCGGGGTGCTGACAAGGACTGTGTTTGGGGCTGC	7	+	62483332-62483381	7q11.21b	PREDICTED: Homo sapiens similar to solute carrier family 29 (nucleoside transporters), member 4 (LOC402269), mRNA.					
Homo sapiens	RefSeq	XM_941635.1	ILMN_37273	LOC654074	XM_941635.1	XM_941635.1		654074	88958004	XM_941635.1	LOC654074	XP_946728.1	ILMN_1794150	0004900706	A	1197	CATATTGCCCCGCGCCTATAGTTTTGTTAAGTCTTACCCTGTAATTTTTG					PREDICTED: Homo sapiens similar to heterogeneous nuclear ribonucleoprotein C isoform b, transcript variant 1 (LOC654074), mRNA.					
Homo sapiens	RefSeq	NM_153020.1	ILMN_6412	RBM24	NM_153020.1	NM_153020.1		221662	23308560	NM_153020.1	RBM24	NP_694565.1	ILMN_2118832	0001740594	S	2202	ACAAGGGAAGACAGGTTAGCATTTTTATGGACTTTCTCCATTATCACTGG	6	+	17401884-17401933	6p22.3e	Homo sapiens RNA binding motif protein 24 (RBM24), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors on mast cells or basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines [goid 16068] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ37697; RNPC6; FLJ30829; dJ259A10.1; FLJ26355	FLJ37697; RNPC6; FLJ30829; dJ259A10.1; FLJ26355
Homo sapiens	RefSeq	NM_153020.1	ILMN_6412	RBM24	NM_153020.1	NM_153020.1		221662	23308560	NM_153020.1	RBM24	NP_694565.1	ILMN_1673941	0006450041	S	1208	GGAGCGTGGCAGTGGGTAAAATGGTGGACAGGCACCAAAGCTATTTTCTC	6	+	17400890-17400939	6p22.3e	Homo sapiens RNA binding motif protein 24 (RBM24), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors on mast cells or basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines [goid 16068] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ37697; RNPC6; FLJ30829; dJ259A10.1; FLJ26355	FLJ37697; RNPC6; FLJ30829; dJ259A10.1; FLJ26355
Homo sapiens	RefSeq	NM_005415.3	ILMN_7081	SLC20A1	NM_005415.3	NM_005415.3		6574	31543629	NM_005415.3	SLC20A1	NP_005406.3	ILMN_1672662	0006420731	S	2860	CATGCTCTGCGTTGTTGGTTTCACCAGCTTCTGCCCTCACATGCACAGGG	2	+	113137447-113137496	2q13d	Homo sapiens solute carrier family 20 (phosphate transporter), member 1 (SLC20A1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8041748] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8041748] [evidence TAS]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 8041748] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8041748] [evidence TAS]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 8041748] [evidence TAS]; Catalysis of the transfer of a inorganic phosphate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 5315] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in) [goid 5436] [pmid 8041748] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	Glvr-1; PiT-1; FLJ41426; GLVR1; PIT1; DKFZp686J2397	Glvr-1; PiT-1; FLJ41426; GLVR1; PIT1; DKFZp686J2397
Homo sapiens	RefSeq	NR_030348.1	ILMN_388100	MIR617	NR_030348.1	NR_030348.1		693202	262206083	NR_030348.1	MIR617		ILMN_3308632	0004540193	S	31	GGTGGCCATTTCCTACCACCTTCAAATGGTAAGTCCAGGCTCCTTCTGAT				12q21.31a	Homo sapiens microRNA 617 (MIR617), microRNA.					
Homo sapiens	RefSeq	NM_199165.1	ILMN_1715	ADSSL1	NM_199165.1	NM_199165.1		122622	40316943	NM_199165.1	ADSSL1	NP_954634.1	ILMN_1749804	0001660446	I	102	ACAGCCCTCCCCTGGCTGCCTCCAAGGAGTCTCCAGTTACTGAGTGGCCA	14	+	104267374-104267423	14q32.33b	Homo sapiens adenylosuccinate synthase like 1 (ADSSL1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15786719] [evidence IDA]	Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats [goid 2376] [pmid 15786719] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate [goid 6167] [pmid 15786719] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [pmid 15786719] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 15786719] [evidence NAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with phosphate [goid 42301] [pmid 15786719] [evidence NAS]	FLJ38602	FLJ38602
Homo sapiens	RefSeq	NM_138699.2	ILMN_165853	LOC93622	XR_017952.1	XR_017952.1		93622	113415929	XR_017952.1	LOC93622		ILMN_1797181	0002630224	S	1819	CAAGCTGGCCATGGGGGTCCCAAACAGTCATTCCAGGCTTAGATGATGAC				4p16.1f	PREDICTED: Homo sapiens hypothetical protein BC006130 (LOC93622), misc RNA.					
Homo sapiens	RefSeq	XM_373496.3	ILMN_37666	LOC387762	XM_373496.3	XM_373496.3		387762	89033926	XM_373496.3	LOC387762	XP_373496.2	ILMN_1723908	0007150332	A	609	AACAAGTTGGAGGAAGGCAGGAACGCAGGGGTTAAGCTCGGAAAGCCGCA	11	+	43557400-43557449		PREDICTED: Homo sapiens hypothetical LOC387762 (LOC387762), mRNA.					
Homo sapiens	Unigene	Hs.309493	ILMN_85773	HS.309493	Hs.309493		Hs.309493		27833723	BX105881			ILMN_1840806	0005900328	S	128	TGAAAAGTCCCCTGGAAGGGAGGACAGAGAGTTGAGGGCAGGACCTTGGG	1	-	203722529-203722578		BX105881 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGp998G035226, mRNA sequence					
Homo sapiens	RefSeq	XM_001718872.1	ILMN_348979	LOC100128090	XM_001718872.1	XM_001718872.1		100128090	169168925	XM_001718872.1	LOC100128090	XP_001718924.1	ILMN_3269191	0001400470	M	609	TTGGCGCTAGAGGCAAGAGGAAGGGGGTCTGCGAGAGGTGCCGAAGACCA				6p22.1c	PREDICTED: Homo sapiens hypothetical protein LOC100128090 (LOC100128090), mRNA.					
Homo sapiens	Unigene	Hs.534641	ILMN_102446	HS.534641	Hs.534641		Hs.534641		29746068	XM_293396			ILMN_1894087	0000990324	S	658	GAAGCAATCAAAATGTGTCAGCAGGGAGCCCCCAGTGTTCAGGGGCCCAG					PREDICTED: Homo sapiens similar to Heat shock transcription factor, Y-linked (Heat shock transcription factor 2-like protein) (HSF2-like) (LOC347512), mRNA					
Homo sapiens	RefSeq	NM_032109.2	ILMN_4247	OTP	NM_032109.2	NM_032109.2		23440	24497624	NM_032109.2	OTP	NP_115485.1	ILMN_1659270	0002030477	I	2267	TCGCTGCTCTGTGCCCTTGGTTGTTTTGTGGTGGTCCTGTCGTCCCTCGT	5	-	76960654-76960703	5q14.1a	Homo sapiens orthopedia homeobox (OTP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The differentiation of cells that will contribute to the structure and function of the hypothalamus [goid 21979] [evidence IEA]; The progression of the neurohypophysis over time from its initial formation until its mature state. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation [goid 21985] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC3161	MGC3161
Homo sapiens	RefSeq	NM_030931.2	ILMN_15371	DEFB126	NM_030931.2	NM_030931.2		81623	30061484	NM_030931.2	DEFB126	NP_112193.1	ILMN_1792172	0001580767	S	160	GGTTGGGCAATGTGCGGCAAACAAAGGGACTGCTGTGTTCCAGCTGACAG	20	+	74139-74188	20p13f	Homo sapiens defensin, beta 126 (DEFB126), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		DEFB26; DEFB-26; bA530N10.1; hBD-26; ESP13.2; C20orf8	DEFB26; hBD-26; DEFB-26; bA530N10.1; ESP13.2; C20orf8
Homo sapiens	RefSeq	XM_941772.1	ILMN_42850	LOC652344	XM_941772.1	XM_941772.1		652344	89071342	XM_941772.1	LOC652344	XP_946865.1	ILMN_1699805	0002600020	S	584	CAAGTCATAGGGTGATATTGTCTTTGCCCTTGAGGAAGCAGACCATGGGC					PREDICTED: Homo sapiens similar to Ig heavy chain V-III region VH26 precursor (LOC652344), mRNA.					
Homo sapiens	Unigene	Hs.581580	ILMN_133761	HS.581580	Hs.581580		Hs.581580		2035802	AA383422			ILMN_1880761	0003170240	S	49	CCCTACAAACAGCATGATCAAAGATCTACTCCACAGCTCTTCTCCCTTCC	3	+	101037446-101037467:101064369-101064396		EST96866 Testis I Homo sapiens cDNA 5 end, mRNA sequence					
Homo sapiens	RefSeq	NM_004966.2	ILMN_306974	HNRNPF	NM_001098204.1	NM_001098204.1		3185	148470403	NM_001098204.1	HNRNPF	NP_001091674.1	ILMN_1668179	0005570639	S	2421	AGCAGCACACATTCTGGGAAGCATCAAATAGACACACGGCCCCAGCCACC	10	-	43881226-43881275	10q11.21b	Homo sapiens heterogeneous nuclear ribonucleoprotein F (HNRNPF), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7499401] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 7499401] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 43484] [pmid 9111328] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7499401] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9111328] [evidence IPI]	OK/SW-cl.23; HNRNPF; mcs94-1; MGC110997	HNRNPF; mcs94-1; MGC110997
Homo sapiens	RefSeq	NM_015238.1	ILMN_164651	WWC1	NM_015238.1	NM_015238.1		23286	29789057	NM_015238.1	WWC1	NP_056053.1	ILMN_1658619	0001090575	S	3942	CTTCTTGAGCTGTGACGTGTTTTTATGTGGCTGCCCAACGTGGAGCGGGC	5	+	167829134-167829183	5q35.1a	Homo sapiens WW and C2 domain containing 1 (WWC1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ10865; KIAA0869; KIBRA; FLJ23369	FLJ10865; KIAA0869; KIBRA; FLJ23369
Homo sapiens	RefSeq	NM_001004686.1	ILMN_165487	OR2L2	NM_001004686.2	NM_001004686.2		26246	85662708	NM_001004686.2	OR2L2	NP_001004686.1	ILMN_1680225	0000770288	S	641	CTATGTTGACGCTAGCCTGCACAGACACTTGGGTCTATGAGAGCACAGTG	1	+	246268737-246268786	1q44e	Homo sapiens olfactory receptor, family 2, subfamily L, member 2 (OR2L2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2L4P; HSHTPCRH07; OR2L12; OR1-48; HTPCRH07	OR2L4P; HSHTPCRH07; OR2L12; OR1-48; HTPCRH07
Homo sapiens	RefSeq	XM_941669.1	ILMN_46523	LOC652259	XM_941669.1	XM_941669.1		652259	89037046	XM_941669.1	LOC652259	XP_946762.1	ILMN_1762858	0004730129	S	687	GCATGCACTGCCCCCGCCTCTTGGTTTGACTTTAGATGACGGTGAAGTGA					PREDICTED: Homo sapiens hypothetical protein LOC652259 (LOC652259), mRNA.					
Homo sapiens	RefSeq	XM_931348.1	ILMN_41639	LOC643132	XM_931348.1	XM_931348.1		643132	88997645	XM_931348.1	LOC643132	XP_936441.1	ILMN_1752660	0007380543	S	486	GTCCATTCATCCAAGTTGACAAGAAGAAACCTCAGGCATGAAGACAGAAC	6	-	106167282-106167331		PREDICTED: Homo sapiens hypothetical protein LOC643132 (LOC643132), mRNA.					
Homo sapiens	RefSeq	XM_001716684.1	ILMN_353125	LOC100130247	XM_001716684.1	XM_001716684.1		100130247	169212690	XM_001716684.1	LOC100130247	XP_001716736.1	ILMN_3273909	0003870259	M	25	CCTCGGATGCATGGCCTTCTGGCCGAGCATCTGCAATTTCATATTGTTGG	18	-	1166939-1166988	18p11.32b	PREDICTED: Homo sapiens similar to Cytochrome c oxidase polypeptide VIc (LOC100130247), mRNA.					
Homo sapiens	Unigene	Hs.232517	ILMN_82792	HS.232517	Hs.232517		Hs.232517		5811627	AI984350			ILMN_1888252	0004860072	S	149	CAGAAAGTGTAGTTCCTTAATGCCCCCCTTTGCCTAATAGAAGTCATGAG	X	+	106066612-106066661		wr87e01.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2494680 3, mRNA sequence					
Homo sapiens	RefSeq	NM_213604.1	ILMN_29163	ADAMTSL5	NM_213604.1	NM_213604.1		339366	47106072	NM_213604.1	ADAMTSL5	NP_998769.1	ILMN_1793040	0003460356	S	2198	GGCACTGTAACGTACCAACGTACCAATTTCCCCTTTTCCCCTGGCTACCA	19	-	1456457-1456506	19p13.3h	Homo sapiens ADAMTS-like 5 (ADAMTSL5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	THSD6	THSD6
Homo sapiens	RefSeq	Hs.582967	ILMN_164577	LOC729792	XM_001131329.1	XM_001131329.1		729792	113417485	XM_001131329.1	LOC729792	XP_001131329.1	ILMN_1855975	0001400148	S	4053	GGGAGCATCATCTACCACCTCAGCCCACGGCGTCAGGACCACCACAGGAT	6	+	31108091-31108140	6p21.33a	PREDICTED: Homo sapiens hypothetical LOC729792 (LOC729792), mRNA.					
Homo sapiens	RefSeq	XR_000527.1	ILMN_177215	LOC389730	XR_017727.1	XR_017727.1		389730	113420711	XR_017727.1	LOC389730		ILMN_1729076	0004640681	S	1383	TTTCCAGGCCCAGCCCCTGTCCCACCGCCAACCCTTTATTTCATCCACAC	9	-	43567235-43567284	9p11.2c	PREDICTED: Homo sapiens similar to chromosome 9 open reading frame 36 (LOC389730), misc RNA.					
Homo sapiens	RefSeq	NM_001033059.1	ILMN_20135	AMD1	NM_001033059.1	NM_001033059.1		262	74275347	NM_001033059.1	AMD1	NP_001028231.1	ILMN_1788462	0000050050	A	2750	GGAGCTCTGTTTTGAGGACCAATGCTTAAGGTGGACTTTGTTCGTAAACA	6	+	111216560-111216609	6q21h	Homo sapiens adenosylmethionine decarboxylase 1 (AMD1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 6597] [evidence IEA]; The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence IEA]; The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 6597] [evidence IEA]; The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence IEA]; The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 6597] [evidence IEA]; The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence IEA]; The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 6597] [evidence NAS]; The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence NAS]	Catalysis of the reaction: S-adenosyl-L-methionine = (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt + CO2 [goid 4014] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt + CO2 [goid 4014] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt + CO2 [goid 4014] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt + CO2 [goid 4014] [pmid 1917972] [evidence TAS]; Catalysis of the reaction: S-adenosyl-L-methionine = (5-deoxy-5-adenosyl)(3-aminopropyl) methylsulfonium salt + CO2 [goid 4014] [pmid 2460457] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	ADOMETDC; AMD; DKFZp313L1234; FLJ26964	ADOMETDC; AMD; DKFZp313L1234; FLJ26964
Homo sapiens	RefSeq	NM_199205.1	ILMN_15274	KIAA1967	NM_199205.1	NM_199205.1		57805	40548407	NM_199205.1	KIAA1967	NP_954675.1	ILMN_1786345	0005690162	I	41	AGCGGCTGTGGTGGTTCCGGGTGTCTTTGTCCCCCCGGTGTCGCTGCCCT	8	+	22462297-22462346	8p21.3a	Homo sapiens KIAA1967 (KIAA1967), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15824730] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15824730] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 15824730] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 15824730] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17314511] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DBC-1; DBC1	DBC-1; DBC1
Homo sapiens	RefSeq	NM_015928.1	ILMN_13136	APRIN	NM_015928.1	NM_015928.1		23047	7705287	NM_015928.1	APRIN	NP_057012.1	ILMN_1686011	0004780292	I	4239	TAAGTTGTAAATATTACATTTCAAACCAATTTCAAATTATTTTGCAAAAG	13	+	32242901-32242903:32242904-32242950	13q13.1b	Homo sapiens androgen-induced proliferation inhibitor (APRIN), transcript variant 2, mRNA.				AS3; FLJ23236; RP1-267P19.1; KIAA0979; CG008	AS3; FLJ23236; RP1-267P19.1; KIAA0979; CG008
Homo sapiens	RefSeq	NM_022458.2	ILMN_1755	LMBR1	NM_022458.3	NM_022458.3		64327	126513134	NM_022458.3	LMBR1	NP_071903.2	ILMN_1764522	0004590612	S	2586	GCCGAGTGGTAGAAACTCCTCTTTCTTCATAGTCCTCAGGCTTTGGTTAC	7	-	156475824-156475873	7q36.3b-q36.3c	Homo sapiens limb region 1 homolog (mouse) (LMBR1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PPD2; DIF14; ACHP; FLJ11665; TPT; C7orf2	ACHP; FLJ11665; C7orf2
Homo sapiens	RefSeq	XM_942442.1	ILMN_35777	LOC654121	XM_942442.1	XM_942442.1		654121	89059281	XM_942442.1	LOC654121	XP_947535.1	ILMN_1753892	0001230554	S	95	AAGAGCTGAGGTGTGGGTGTTCGTTTCTCAGGTAAAACATGGCTAAAAGC					PREDICTED: Homo sapiens similar to C49H3.3 (LOC654121), mRNA.					
Homo sapiens	RefSeq	NM_001003931.1	ILMN_25823	PARP3	NM_001003931.1	NM_001003931.1		10039	51558728	NM_001003931.1	PARP3	NP_001003931.1	ILMN_1796682	0006130615	A	1992	GCAAGGCTGGACTGTGATCTTCAATCATCCTGCCCATCTCTGGTACCCCT	3	+	51957560-51957609	3p21.1e	Homo sapiens poly (ADP-ribose) polymerase family, member 3 (PARP3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 7260241] [evidence TAS]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 10338144] [evidence TAS]	Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	ADPRTL3; ADPRTL2; ADPRT3; pADPRT-3; IRT1; hPARP-3	ADPRTL3; ADPRTL2; ADPRT3; pADPRT-3; IRT1; hPARP-3
Homo sapiens	RefSeq	XM_001723488.1	ILMN_337404	LOC728945	XM_001723488.1	XM_001723488.1		728945	169161411	XM_001723488.1	LOC728945	XP_001723540.1	ILMN_3237788	0000240148	S	402	CGCTGTGAGCCCTGTACTATCAGCCATGGTCAACTCCGTCGTCTTTTTTG	1	+	147072689-147072713:147072714-147072738	1q21.1e	PREDICTED: Homo sapiens similar to Peptidylprolyl isomerase A (cyclophilin A)-like 4 (LOC728945), mRNA.					
Homo sapiens	RefSeq	NM_024571.2	ILMN_821	C16ORF33	NM_024571.2	NM_024571.2		79622	52851417	NM_024571.2	C16orf33	NP_078847.1	ILMN_1801118	0004760450	S	1403	CTGGTGGCTGAGCTTTTTCCCAGCAGGAATGGGTCCTCGAATCATCGTGC	16	+	47174-47223	16p13.3f	Homo sapiens chromosome 16 open reading frame 33 (C16orf33), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The minor (U12-dependent) spliceosome is composed of the snRNPs, U11, U12, U4atac, U6atac, and U5 (which is also a component of the major spliceosome). This minor form of the spliceosome is responsible for the splicing of the majority of introns with atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site [goid 5689] [pmid 15146077] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 15146077] [evidence IC ]		FLJ22940	FLJ22940
Homo sapiens	RefSeq	NM_014361.2	ILMN_696	CNTN5	NM_014361.2	NM_014361.2		53942	28373127	NM_014361.2	CNTN5	NP_055176.1	ILMN_1710289	0001010338	I	412	CCTGGTCTCTCCACTTCATATGCTGCTTTGTTAAGAATTAAGAAGAGTTC	11	+	98932098-98932147	11q22.1b-q22.1c	Homo sapiens contactin 5 (CNTN5), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HNB-2s; MGC163491; NB-2	HNB-2s; MGC163491; NB-2
Homo sapiens	RefSeq	NM_018339.3	ILMN_170743	RFK	NM_018339.3	NM_018339.3		55312	39725953	NM_018339.3	RFK	NP_060809.2	ILMN_2211263	0001170136	S	2251	AAAGCTGTTGGAGAAGAGGGACTCATATAAATAGTTGGATTGCGTTTTGC	9	-	78190648-78190697	9q21.13c	Homo sapiens riboflavin kinase (RFK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12623014] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12623014] [evidence EXP]	The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) [goid 9231] [pmid 12623014] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + riboflavin = ADP + FMN [goid 8531] [pmid 12623014] [evidence NAS]; Catalysis of the reaction: ATP + riboflavin = ADP + FMN [goid 8531] [pmid 12623014] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ11149; RP11-422N19.2; RIFK	FLJ11149; RP11-422N19.2; RIFK
Homo sapiens	RefSeq	XM_939602.1	ILMN_40532	LOC343927	XM_939602.1	XM_939602.1		343927	89066287	XM_939602.1	LOC343927	XP_944695.1	ILMN_1763352	0001070521	S	37	CAAATAAAAGGTTGTAAAAGTTTGAATGCATCTAAGGTGCAGGAAGGAGG					PREDICTED: Homo sapiens similar to zinc finger protein 15-like 1 (KOX 8) (LOC343927), mRNA.					
Homo sapiens	Unigene	Hs.244140	ILMN_83072	HS.244140	Hs.244140		Hs.244140		28502851	BC047233			ILMN_1894624	0003850424	S	1735	TGGGTTCCATCATCTGTTGAGGCCTGGCTACTTCAGGGGGATTGCTGTTG	7	-	141614788-141614837		Homo sapiens cDNA clone IMAGE:4830802, partial cds					
Homo sapiens	RefSeq	NM_001015047.1	ILMN_27600	DDX19-DDX19L	NM_001015047.1	NM_001015047.1		544314	62632745	NM_001015047.1	DDX19-DDX19L	NP_001015047.1	ILMN_1728069	0007650519	S	2001	TGGACCCATCACAAGTGGTTTCTCCTGGCCCTGGGGTGGTCTTCCTTCTC	16	+	68963944-68963986	16q22.1f	Homo sapiens DDX19-DDX19L protein (DDX19-DDX19L), mRNA.					
Homo sapiens	RefSeq	NM_153213.2	ILMN_20302	ARHGEF19	NM_153213.3	NM_153213.3		128272	141802042	NM_153213.3	ARHGEF19	NP_694945.2	ILMN_1808999	0006250546	S	2815	GACTGGGGCCCTCTCCTTTCTATGTCCTCAATCCTGCCTGACTCTTGGTC	1	-	16524763-16524812	1p36.13f	Homo sapiens Rho guanine nucleotide exchange factor (GEF) 19 (ARHGEF19), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	WGEF; FLJ33962; RP4-733M16.1	WGEF; FLJ33962; RP4-733M16.1
Homo sapiens	RefSeq	NM_000850.3	ILMN_3050	GSTM4	NM_000850.3	NM_000850.3		2948	23065554	NM_000850.3	GSTM4	NP_000841.1	ILMN_1716979	0004060707	A	101	CTGCTCCGTGCCTCCCGCGCCTGTTGGTTGGAAGTGACGACCTTGAAGAT	1	+	110000326-110000375	1p13.3b	Homo sapiens glutathione S-transferase M4 (GSTM4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 8349586] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GSTM4-4; MGC131945; MGC9247; GTM4	GSTM4-4; MGC131945; MGC9247; GTM4
Homo sapiens	RefSeq	NM_002546.2	ILMN_6495	TNFRSF11B	NM_002546.3	NM_002546.3		4982	148743792	NM_002546.3	TNFRSF11B	NP_002537.3	ILMN_1676663	0002370132	S	1330	ATGGCGACCAAGACACCTTGAAGGGCCTAATGCACGCACTAAAGCACTCA	8	-	120005943-120005992	8q24.12a-q24.12b	Homo sapiens tumor necrosis factor receptor superfamily, member 11b (TNFRSF11B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9108485] [evidence TAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9108485] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9168977] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx [goid 42489] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9108485] [evidence TAS]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 9168977] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC29565; OCIF; OPG; TR1	MGC29565; OCIF; OPG; TR1
Homo sapiens	RefSeq	NM_001015053.1	ILMN_6752	HDAC5	NM_005474.4	NM_005474.4		10014	62750346	NM_005474.4	HDAC5	NP_005465.2	ILMN_1810856	0006620692	A	5047	GAGGGGCAGGAGTCCCAGCACCATCGGTTCATAGTGTGCTTGTGTGTTTG	17	-	42154348-42154397	17q21.31c	Homo sapiens histone deacetylase 5 (HDAC5), transcript variant 1, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12711221] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 10220385] [evidence TAS]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [pmid 10869435] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10869435] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12711221] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12711221] [evidence TAS]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 12711221] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ90614; HD5; NY-CO-9	FLJ90614; HD5; NY-CO-9
Homo sapiens	RefSeq	NM_005474.4	ILMN_6752	HDAC5	NM_005474.4	NM_005474.4		10014	62750346	NM_005474.4	HDAC5	NP_005465.2	ILMN_2388166	0006100497	A	4880	CCTGTAGGAAACCAAAGATGGGAAGTGGCTCCTAGGGGGCTGACTCTTCC	17	-	42154515-42154564	17q21.31c	Homo sapiens histone deacetylase 5 (HDAC5), transcript variant 1, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12711221] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 10220385] [evidence TAS]; Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [pmid 10869435] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10869435] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12711221] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12711221] [evidence TAS]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 12711221] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ90614; HD5; NY-CO-9	FLJ90614; HD5; NY-CO-9
Homo sapiens	RefSeq	NM_145232.2	ILMN_22854	ATPBD3	NM_145232.2	NM_145232.2		90353	37059754	NM_145232.2	ATPBD3	NP_660275.1	ILMN_1682375	0001230324	S	1093	CTGATGCCGCGGGGTGGGGGCTGCCTGTAAATGACACTGTGAATAAACCC	19	-	56293595-56293644	19q13.33d	Homo sapiens ATP binding domain 3 (ATPBD3), mRNA.				MGC17332	MGC17332
Homo sapiens	RefSeq	NM_001017363.1	ILMN_24805	ARID3C	NM_001017363.1	NM_001017363.1		138715	62865636	NM_001017363.1	ARID3C	NP_001017363.1	ILMN_1757626	0003120634	S	1049	AAGAGCGGCTGGATGGGCCTCTTAATCTGGCAGGCAGTGGCATCAGCAGT	9	-	34622056-34622105	9p13.3c	Homo sapiens AT rich interactive domain 3C (BRIGHT-like) (ARID3C), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	NM_138393.1	ILMN_15192	REEP6	NM_138393.1	NM_138393.1		92840	19923918	NM_138393.1	REEP6	NP_612402.1	ILMN_1697460	0002320273	S	1204	AGTGCCCGAGCTGGTCCCCTGCCATTCCGGGACCTCTCTGGAGTACACTT	19	+	1448755-1448804	19p13.3h	Homo sapiens receptor accessory protein 6 (REEP6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ25383; DP1L1; C19orf32; TB2L1	FLJ25383; DP1L1; C19orf32; TB2L1
Homo sapiens	RefSeq	NM_181847.2	ILMN_164188	AMIGO2	NM_181847.3	NM_181847.3		347902	142371363	NM_181847.3	AMIGO2	NP_862830.1	ILMN_1725896	0007100053	S	3515	GGTCAAACAGTGGCAGGGAAAGAAGGAGAGCTGGGGTTTAGCATTCTCCC	12	-	45755955-45756004	12q13.11b	Homo sapiens adhesion molecule with Ig-like domain 2 (AMIGO2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 12629050] [evidence ISS]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [pmid 12629050] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43069] [pmid 12843293] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	ALI1; DEGA	ALI1; DEGA
Homo sapiens	RefSeq	XM_001719568.1	ILMN_333842	LOC100130648	XM_001719568.1	XM_001719568.1		100130648	169216253	XM_001719568.1	LOC100130648	XP_001719620.1	ILMN_3234813	0007050397	S	258	GATGTATTCTCTTTCAGTTGAACGTCCTCAGATGACTTTCGGCAGGCTCC					PREDICTED: Homo sapiens similar to Protein SSX2 (Synovial sarcoma, X breakpoint 2) (Cancer/testis antigen 5.2) (CT5.2) (SSX) (HOM-MEL-40) (LOC100130648), mRNA.					
Homo sapiens	RefSeq	NM_014067.2	ILMN_13854	MACROD1	NM_014067.2	NM_014067.2		28992	13569839	NM_014067.2	MACROD1	NP_054786.2	ILMN_1740960	0002370279	S	908	ACGCTGCGAGAGTGGCTGGAGCAGCACAAGGACAAGGTGGACCGGCTGAT	11	-	63523070-63523084:63523379-63523413	11q13.1a	Homo sapiens MACRO domain containing 1 (MACROD1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			LRP16	LRP16
Homo sapiens	RefSeq	NM_020987.2	ILMN_21858	ANK3	NM_020987.2	NM_020987.2		288	32967600	NM_020987.2	ANK3	NP_066267.2	ILMN_1651943	0002630600	I	11113	GGGAAGTCAGGGGACCAGGGGGAAGGGGATAAAAGTATGGTCACTGCCAC	10	-	61829668-61829717	10q21.2a	Homo sapiens ankyrin 3, node of Ranvier (ankyrin G) (ANK3), transcript variant 1, mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8666667] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 8666667] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 7836469] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 7836469] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15823567] [evidence IPI]	ANKYRIN-G; FLJ45464	ANKYRIN-G; FLJ45464
Homo sapiens	RefSeq	XM_001715134.1	ILMN_334699	LOC730087	XM_001715134.1	XM_001715134.1		730087	169213842	XM_001715134.1	LOC730087	XP_001715186.1	ILMN_3297379	0000520193	M	471	TGAGATGGTGGATGAACCCCCAGACATTTGGCCAGAGCAGGGCGTGGAAG				19p12b	PREDICTED: Homo sapiens similar to zinc finger protein 91 (LOC730087), mRNA.					
Homo sapiens	RefSeq	NM_015087.3	ILMN_169840	SPG20	NM_015087.3	NM_015087.3		23111	40806197	NM_015087.3	SPG20	NP_055902.1	ILMN_1801236	0003120170	S	4639	GACTGTCCCCTGGTACACATATGCAAGAGACTTTATGCGTAAGAGTGGAG	13	-	35773908-35773957	13q13.3b	Homo sapiens spastic paraplegia 20 (Troyer syndrome) (SPG20), mRNA.				TAHCCP1; KIAA0610; SPARTIN	TAHCCP1; KIAA0610; SPARTIN
Homo sapiens	RefSeq	NM_020940.3	ILMN_364594	FAM160B1	NM_020940.3	NM_020940.3		57700	205277426	NM_020940.3	FAM160B1	NP_065991.3	ILMN_3231638	0001340739	I	5643	CCAGCGTCTGGAATTCTTGGTCCCTCCGTGGAGAAACTCTTCAGATGGTC	10	+	116624309-116624358	10q25.3a	Homo sapiens family with sequence similarity 160, member B1 (FAM160B1), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_014473.2	ILMN_11480	DIMT1L	NM_014473.2	NM_014473.2		27292	56786140	NM_014473.2	DIMT1L	NP_055288.1	ILMN_1803312	0001110114	S	1461	CTAGTCACACATTCCCCATACCATTTCGTGTTATTCACATTCCCCGTACC	5	-	61720154-61720203	5q12.1c	Homo sapiens DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) (DIMT1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]	Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DIMT1; HSA9761	DIMT1; HSA9761
Homo sapiens	Unigene	Hs.567088	ILMN_119293	HS.567088	Hs.567088		Hs.567088		19025151	BM711893			ILMN_1863439	0005290156	S	394	CATAGGTCGCCAGCTTCTTGAGCTTGAGTTTCCTTATTGGCAGCAGGGGC	9	-	8782987-8783036		UI-E-CL1-afc-g-16-0-UI.r1 UI-E-CL1 Homo sapiens cDNA clone UI-E-CL1-afc-g-16-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_182579.1	ILMN_177191	C1ORF157	NM_182579.2	NM_182579.2		284573	109627664	NM_182579.2	C1orf157	NP_872385.2	ILMN_1809448	0006400168	S	1013	TCTGGGGAAAGCCTAACAGTGGCACCCAAGCAGAGCTAGGAGGTCCAGGT	1	-	202268645-202268694	1q32.1e	Homo sapiens chromosome 1 open reading frame 157 (C1orf157), mRNA.				MGC120332; MGC120330; FLJ40343; MGC120329	MGC120332; MGC120330; FLJ40343; MGC120329
Homo sapiens	RefSeq	XM_941904.1	ILMN_32683	LOC652455	XM_941904.1	XM_941904.1		652455	89062811	XM_941904.1	LOC652455	XP_946997.1	ILMN_1744048	0004830719	S	1776	AAGGAGGGATACTCCCATGCTGCCAAAGGATACCATACTTGCAGAGCTCC					PREDICTED: Homo sapiens similar to Transcriptional regulator ATRX (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX) (LOC652455), mRNA.					
Homo sapiens	RefSeq	XM_001714741.1	ILMN_350631	LOC100131414	XM_001714741.1	XM_001714741.1		100131414	169179950	XM_001714741.1	LOC100131414	XP_001714793.1	ILMN_3293749	0007040138	M	318	GCGCCCAGAACCCTCCGGTCTCAAGGAAGCAGGAAATAGCCCGAATCACA				9q21.11a	PREDICTED: Homo sapiens hypothetical LOC100131414 (LOC100131414), mRNA.					
Homo sapiens	RefSeq	NM_012393.1	ILMN_17615	PFAS	NM_012393.1	NM_012393.1		5198	31657128	NM_012393.1	PFAS	NP_036525.1	ILMN_1755862	0003840092	S	5125	GACTGTTGTTGATTAGTTATTATTGCAAAGCACTGTCACCGGCCTCAGGG	17	+	8114315-8114364	17p13.1c	Homo sapiens phosphoribosylformylglycinamidine synthase (FGAR amidotransferase) (PFAS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8110788] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of IMP, inosine monophosphate, by the stepwise assembly of a purine ring on ribose 5-phosphate [goid 6189] [pmid 10548741] [evidence NAS]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + 5'-phosphoribosylformylglycinamide + L-glutamine + H2O = ADP + phosphate + 5'-phosphoribosylformylglycinamidine + L-glutamate [goid 4642] [pmid 10548741] [evidence IDA]; Catalysis of the reaction: ATP + 5'-phosphoribosylformylglycinamide + L-glutamine + H2O = ADP + phosphate + 5'-phosphoribosylformylglycinamidine + L-glutamate [goid 4642] [pmid 8110788] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FGAMS; PURL; KIAA0361; FGARAT	FGAMS; PURL; KIAA0361; FGARAT
Homo sapiens	RefSeq	NR_024352.1	ILMN_371738	NCRNA00159	NR_024352.1	NR_024352.1		54070	211904168	NR_024352.1	NCRNA00159		ILMN_3247237	0002630348	S	109	CCGCACATCACACCATAGAACTGACACAGCGATGACACACTGCCTGCTGC	21	+	33452737-33452786		Homo sapiens non-protein coding RNA 159 (NCRNA00159), non-coding RNA.					
Homo sapiens	RefSeq	XM_001722781.1	ILMN_342191	FAM159B	XM_001722781.1	XM_001722781.1		100132916	169167847	XM_001722781.1	FAM159B	XP_001722833.1	ILMN_3207821	0003930520	A	126	CAGACACCATGTGGACAAGGGGAGGAGAGAAATCAGAGGTGGCGCGCGAA				5q12.3a	PREDICTED: Homo sapiens family with sequence similarity 159, member B (FAM159B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_001722781.1	ILMN_342191	FAM159B	XM_001722781.1	XM_001722781.1		100132916	169167847	XM_001722781.1	FAM159B	XP_001722833.1	ILMN_3284331	0002570242	M	7407	TTAAGTGGGATTTGAACTGCCTTAAATTCTTCTTGGAGTAAGGTAGGGAG				5q12.3a	PREDICTED: Homo sapiens family with sequence similarity 159, member B (FAM159B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.278817	ILMN_84398	HS.278817	Hs.278817		Hs.278817		51593574	BC080625			ILMN_1863738	0006940632	S	1236	GGCGGGTGATGGAAGTCTTCAACAACTGGATTGTGGTGCTGGTTGCACAG	2	-	15645909-15645958		Homo sapiens cDNA clone IMAGE:6338670					
Homo sapiens	RefSeq	NM_024921.2	ILMN_10517	POF1B	NM_024921.2	NM_024921.2		79983	24475850	NM_024921.2	POF1B	NP_079197.2	ILMN_1760705	0005340110	S	3742	TAGTGGCTGGGAAAAGGGGTGTGCGAGGGGAACTGGGGATGCTTAATGTG	X	-	84419207-84419256	Xq21.1e-q21.2a	Homo sapiens premature ovarian failure, 1B (POF1B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	FLJ22792; POF	FLJ22792; POF
Homo sapiens	RefSeq	XM_930066.1	ILMN_39788	LOC644824	XM_930066.1	XM_930066.1		644824	89024734	XM_930066.1	LOC644824	XP_935159.1	ILMN_1651495	0006660592	S	1	TCTCCTGTTTTCTTTATACAATGTGGCTGTGTAGAACAGCTCCAAGAAAT	7	+	43597082-43597131		PREDICTED: Homo sapiens hypothetical protein LOC644824 (LOC644824), mRNA.					
Homo sapiens	RefSeq	NM_031208.1	ILMN_24688	FAHD1	NM_031208.1	NM_031208.1		81889	13654273	NM_031208.1	FAHD1	NP_112485.1	ILMN_2246661	0000450161	I	1591	CACCTGTTTACTTAGGGTATCTACCCAGACCCATCGATTCTGAGTTCGGG	16	+	1818816-1818865	16p13.3e	Homo sapiens fumarylacetoacetate hydrolase domain containing 1 (FAHD1), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	C16orf36; YISKL; DKFZp566J2046; MGC74876	YISKL; C16orf36; DKFZp566J2046; MGC74876
Homo sapiens	RefSeq	NM_006055.1	ILMN_13275	LANCL1	NM_006055.1	NM_006055.1		10314	5174444	NM_006055.1	LANCL1	NP_006046.1	ILMN_1703697	0002450612	S	3962	GGACGGCGGTGTGGCCTGAGTTGTCAGTCTTTAATCCTGAGTCATGTGGC	2	-	211004748-211004797	2q34b	Homo sapiens LanC lantibiotic synthetase component C-like 1 (bacterial) (LANCL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9512664] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9512664] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 9512664] [evidence TAS]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [pmid 15082773] [evidence IDA]	p40; GPR69A	p40; GPR69A
Homo sapiens	RefSeq	NM_031994.1	ILMN_168165	RNF17	NM_031277.2	NM_031277.2		56163	94421470	NM_031277.2	RNF17	NP_112567.2	ILMN_1791505	0003390414	A	1285	CTGCAGAGCTAGTTTTTGTAAGCCATGTAATAGATCCTTGCCATTTCTAC	13	+	24268278-24268327	13q12.12b	Homo sapiens ring finger protein 17 (RNF17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	TDRD4; FLJ11045; SPATA23; Mmip-2	Mmip-2
Homo sapiens	RefSeq	NM_031277.1	ILMN_168165	RNF17	NM_031277.2	NM_031277.2		56163	94421470	NM_031277.2	RNF17	NP_112567.2	ILMN_1785676	0005260674	I	1704	CTAAGGAAATCTGAACCATATACTGAAGGGCTGCTAAAAGACATCCAGCC	13	+	24272577-24272626	13q12.12b	Homo sapiens ring finger protein 17 (RNF17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	TDRD4; FLJ11045; SPATA23; Mmip-2	Mmip-2
Homo sapiens	RefSeq	NM_019038.2	ILMN_168165	RNF17	NM_031277.2	NM_031277.2		56163	94421470	NM_031277.2	RNF17	NP_112567.2	ILMN_1689621	0001690070	S	4736	TTGTCCCAAATGGAGCATGGAGGCACTGTGGGCTATGATAGACTGTCTTC	13	+	24349246-24349295	13q12.12b	Homo sapiens ring finger protein 17 (RNF17), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	TDRD4; FLJ11045; SPATA23; Mmip-2	
Homo sapiens	RefSeq	NM_019074.2	ILMN_29434	DLL4	NM_019074.2	NM_019074.2		54567	31881762	NM_019074.2	DLL4	NP_061947.1	ILMN_1690174	0003140682	S	3075	CCAAGGGTGCCAGGCCTAACTGGGGCACTCAGGGCAGTGTGTTGGAAATT	15	+	39018221-39018270	15q15.1b	Homo sapiens delta-like 4 (Drosophila) (DLL4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10837024] [evidence TAS]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 10837024] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [pmid 10837024] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC126344; hdelta2	MGC126344; hdelta2
Homo sapiens	RefSeq	NR_003129.1	ILMN_166458	RNF5P1	NR_003129.1	NR_003129.1		286140	112734764	NR_003129.1	RNF5P1		ILMN_2052863	0007560189	S	599	CTATGTCTGCTTCCCGCCCACCTCCAGCCAGAGGAGAATCAGTATTGAGG	8	-	38577284-38577333	8p11.23c	Homo sapiens ring finger protein 5 pseudogene 1 (RNF5P1), non-coding RNA.					
Homo sapiens	RefSeq	XM_930038.1	ILMN_32495	LOC283970	XM_930038.1	XM_930038.1		283970	89040446	XM_930038.1	LOC283970	XP_935131.1	ILMN_1699211	0001850403	I	53	CTGGCCCAAAATGTCAGCAGTGTTGGGGCTGAGAAATCCTGGTCAAGATC	16	-	68655540-68655589	16q22.1e	PREDICTED: Homo sapiens hypothetical protein LOC283970, transcript variant 2 (LOC283970), mRNA.					
Homo sapiens	Unigene	Hs.325015	ILMN_86180	HS.325015	Hs.325015		Hs.325015		22658379	BC031013			ILMN_1853116	0005340189	S	1089	CTGGAAACAGTAAGGACCAGGATGACCCAGGTGACACAATTCTTTAGCTG	4	-	67979793-67979842		Homo sapiens, clone IMAGE:4655360, mRNA					
Homo sapiens	RefSeq	NM_004900.3	ILMN_5305	APOBEC3B	NM_004900.3	NM_004900.3		9582	22907024	NM_004900.3	APOBEC3B	NP_004891.3	ILMN_2219466	0003170068	S	668	ACCCTTTGGTCCTTCGACGGCGCCAGACCTACTTGTGCTATGAGGTGGAG	22	+	37715452-37715501	22q13.1c	Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B (APOBEC3B), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2 [goid 16814] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amidine, a compound of the form R-C(=NH)-NH2 [goid 16814] [evidence IEA]	FLJ21201; APOBEC1L; ARCD3; DJ742C19.2; PHRBNL; ARP4; bK150C2.2	FLJ21201; APOBEC1L; ARCD3; DJ742C19.2; PHRBNL; ARP4; bK150C2.2
Homo sapiens	RefSeq	NM_005354.2	ILMN_167042	JUND	NM_005354.3	NM_005354.3		3727	102469036	NM_005354.3	JUND	NP_005345.3	ILMN_1810214	0000620280	S	1789	GCTACGAGTCCACATTCCTGTTTGTAATCCTTGGTTCGCCCGGTTTTCTG	19	-	18251594-18251643	19p13.11c	Homo sapiens jun D proto-oncogene (JUND), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 1903194] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1903194] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 1903194] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]		
Homo sapiens	RefSeq	XR_040116.1	ILMN_336327	LOC285943	XR_040116.1	XR_040116.1		285943	169171304	XR_040116.1	LOC285943		ILMN_3277209	0004890692	M	1845	AGTCACCAGGGCACTCGTCCGTGTGGCGCACTCATTGCTCGAAATGTTCC				7p15.2a	PREDICTED: Homo sapiens hypothetical protein LOC285943 (LOC285943), miscRNA.					
Homo sapiens	RefSeq	XM_941189.1	ILMN_36846	LOC651919	XM_941189.1	XM_941189.1		651919	88979746	XM_941189.1	LOC651919	XP_946282.1	ILMN_1762808	0005910685	S	194	CCATCATCCTAGTGGGAACTAAACTTGATCTTAGGGATGATAAAGACCCG					PREDICTED: Homo sapiens similar to Ras-related C3 botulinum toxin substrate 1 (p21-Rac1) (LOC651919), mRNA.					
Homo sapiens	RefSeq	NM_003768.2	ILMN_180056	PEA15	NM_003768.2	NM_003768.2		8682	21359835	NM_003768.2	PEA15	NP_003759.1	ILMN_1771376	0003610228	S	2358	ACCTGCCCACCCACTCCTTATATTGCTGTGAGATTGCCCCTATCTTGTGC	1	+	158451675-158451724	1q23.2d	Homo sapiens phosphoprotein enriched in astrocytes 15 (PEA15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 8662970] [evidence NAS]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10442631] [evidence IDA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 10442631] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46325] [pmid 9670003] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10442631] [evidence IPI]	HUMMAT1H; PEA-15; PED; MAT1; MAT1H; HMAT1	HUMMAT1H; PEA-15; PED; MAT1; MAT1H; HMAT1
Homo sapiens	RefSeq	Hs.515479	ILMN_167708	LOC732172	XM_001132079.1	XM_001132079.1		732172	113428654	XM_001132079.1	LOC732172	XP_001132079.1	ILMN_1893764	0002450682	S	1408	TGGAGTGGGTCCAATATGAAGTCTCCCCCCGTGGAACGCAGCCACCATCA					PREDICTED: Homo sapiens hypothetical protein LOC732172 (LOC732172), mRNA.					
Homo sapiens	RefSeq	NM_006516.1	ILMN_421	SLC2A1	NM_006516.1	NM_006516.1		6513	5730050	NM_006516.1	SLC2A1	NP_006507.1	ILMN_1659027	0004590370	S	2332	AGGGCCTGTGGGAGCCTGCAAACTCACTGCTCAAGAAGACATGGAGACTC	1	-	43164575-43164624	1p34.2a	Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 1 (SLC2A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9462754] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [pmid 9462754] [evidence TAS]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [pmid 9462754] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	MGC141895; MGC141896; GLUT; GLUT1	MGC141896; GLUT1; MGC141895; GLUT
Homo sapiens	RefSeq	NM_001017361.2	ILMN_14715	C6ORF221	NM_001017361.2	NM_001017361.2		154288	164663835	NM_001017361.2	C6orf221	NP_001017361.1	ILMN_3242059	0006060347	S	897	GCCTCACTTAAGTCCAGGAAGCTGGGGTGGCGAGGAAGGATGATGTGGAT	6	+	74073773-74073822	6q13c	Homo sapiens chromosome 6 open reading frame 221 (C6orf221), mRNA.				ECAT1	
Homo sapiens	RefSeq	XM_945139.1	ILMN_43663	LOC649094	XM_945139.1	XM_945139.1		649094	88959124	XM_945139.1	LOC649094	XP_950232.1	ILMN_1789706	0006450369	I	635	CAATGTTGTGAGAAACTAAACATATCCTGTTGTATGTAACTGATCAGCCC					PREDICTED: Homo sapiens similar to Nucleoporin-like protein RIP (HIV-1 Rev-binding protein) (Rev interacting protein) (Rev/Rex activation domain-binding protein), transcript variant 2 (LOC649094), mRNA.					
Homo sapiens	RefSeq	XM_001720531.1	ILMN_344754	LOC100134174	XM_001720531.1	XM_001720531.1		100134174	169217527	XM_001720531.1	LOC100134174	XP_001720583.1	ILMN_3243436	0006620687	S	976	TCCATGGTGTGCGGAGTGACCCACGACCCCCGAGTAACCATCAGGCAGCT					PREDICTED: Homo sapiens similar to sidekick homolog 2 (chicken) (LOC100134174), mRNA.					
Homo sapiens	RefSeq	NR_002325.1	ILMN_22773	SNORA6	NR_002325.1	NR_002325.1		574040	68510025	NR_002325.1	SNORA6		ILMN_3245365	0006980653	S	94	ACACCAGTAGAGCTTGCCTCTATGACTGGAGTTTGGTAGTACTCGCTGCC	3	+	39424979-39425028	3p22.1c	Homo sapiens small nucleolar RNA, H/ACA box 6 (SNORA6), small nucleolar RNA.				ACA6	ACA6
Homo sapiens	RefSeq	XM_942242.1	ILMN_38555	PRNPIP	XM_942242.1	XM_942242.1		79033	88947702	XM_942242.1	PRNPIP	XP_947335.1	ILMN_1669577	0002750328	I	230	GCACCTCTCCCACTACTGGGCTGTTTGGGCCAGTATTTTGAGGTTCTGGG				1p34.1e	PREDICTED: Homo sapiens prion protein interacting protein, transcript variant 2 (PRNPIP), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	NM_016239.2	ILMN_177166	MYO15A	NM_016239.3	NM_016239.3		51168	118402589	NM_016239.3	MYO15A	NP_057323.3	ILMN_1756734	0006450521	S	11479	GGCCGGAAAACAAGCCTGAGGGAGGAGGCAGGAGTTGGAGTTACCTTAGG	17	+	18022426-18022475	17p11.2g-p11.2f	Homo sapiens myosin XVA (MYO15A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10552926] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DKFZp686N18198; MYO15; DFNB3	DKFZp686N18198; MYO15; DFNB3
Homo sapiens	RefSeq	XM_001715126.1	ILMN_336167	LOC100131608	XM_001715126.1	XM_001715126.1		100131608	169172681	XM_001715126.1	LOC100131608	XP_001715178.1	ILMN_3230845	0005270397	I	793	GAGACGTTCATCATCGTGGTCCCGGAACAAGGGACAGAACTCACACTGAG				8p23.1e	PREDICTED: Homo sapiens hypothetical LOC100131608 (LOC100131608), mRNA.					
Homo sapiens	RefSeq	NM_002826.4	ILMN_17233	QSOX1	NM_002826.4	NM_002826.4		5768	52493187	NM_002826.4	QSOX1	NP_002817.2	ILMN_1758229	0004210634	I	2400	CCCCTTGCTCCTTGTCTGGCCTAGAAGTGTGGGAAATTCAGGAAAACGAG	1	+	178432876-178432925	1q25.2c	Homo sapiens quiescin Q6 sulfhydryl oxidase 1 (QSOX1), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10708601] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 17331072] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Oxidation of two organic sulfhydryl groups (thiols) by a disulfide compound to form a disulfide bond [goid 6467] [pmid 17331072] [evidence IGI]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 4 R'C(R)SH + O2 = 2 R'C(R)S-S(R)CR' + 2 H2O [goid 16972] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the formation of disulfide bridges [goid 16971] [pmid 17331072] [evidence IGI]	QSCN6; FLJ34858; Q6; QSOX1	QSCN6; FLJ34858; Q6; QSOX1
Homo sapiens	RefSeq	NM_003824.2	ILMN_11407	FADD	NM_003824.2	NM_003824.2		8772	22219473	NM_003824.2	FADD	NP_003815.1	ILMN_1758658	0001300674	S	1558	CTCTGAGACTGCTAAGTAGGGGCAGTGATGGTTGCCAGGACGAATTGAGA	11	+	69730861-69730910	11q13.3c	Homo sapiens Fas (TNFRSF6)-associated via death domain (FADD), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9721089] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10894160] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12887920] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8681376] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7536190] [evidence EXP]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA];  [goid 8625] [pmid 7538907] [evidence TAS]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a death receptor [goid 5123] [pmid 7538907] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 7536190] [evidence IPI]	GIG3; MORT1; MGC8528	GIG3; MORT1; MGC8528
Homo sapiens	RefSeq	NM_016579.2	ILMN_4822	CD320	NM_016579.2	NM_016579.2		51293	51702225	NM_016579.2	CD320	NP_057663.1	ILMN_2115633	0002340327	S	1014	ACCTGAGCTCTTCTGGCCACGTGGAACCTCGAACCCGAGCTCCTGCAGAA	19	-	8273197-8273246	19p13.2d	Homo sapiens CD320 molecule (CD320), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10727470] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	8D6A; 8D6	8D6A; 8D6
Homo sapiens	RefSeq	XR_039742.1	ILMN_348787	LOC729389	XR_039742.1	XR_039742.1		729389	169213728	XR_039742.1	LOC729389		ILMN_3228037	0002630133	A	688	AGGAGGCTAAGAAGCACCAGGGACAAATCGTGAAGAGACGCAGACTGTCC				19p13.13c	PREDICTED: Homo sapiens misc_RNA (LOC729389), miscRNA.					
Homo sapiens	RefSeq	XM_372193.4	ILMN_31361	KIAA1751	XM_372193.4	XM_372193.4		85452	88942274	XM_372193.4	KIAA1751	XP_372193.3	ILMN_1794528	0005420168	I	384	CGTGAGGAGGTGGAGGCCACGGGGCGGCGGCTCCAGGTGCGCGCAGCCGA	1	-	1895386-1895435	1p36.33a	PREDICTED: Homo sapiens KIAA1751, transcript variant 1 (KIAA1751), mRNA.					
Homo sapiens	RefSeq	NM_000181.1	ILMN_2474	GUSB	NM_000181.2	NM_000181.2		2990	119372313	NM_000181.2	GUSB	NP_000172.1	ILMN_1669878	0003610553	S	2027	ACTTGAGCAAGACTGATACCACCTGCGTGTCCCTTCCTCCCCGAGTCAGG	7	-	65425839-65425883:65425884-65425888	7q11.21d	Homo sapiens glucuronidase, beta (GUSB), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 3468507] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars [goid 6027] [pmid 1465145] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate [goid 4566] [pmid 3468507] [evidence TAS]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	MPS7; FLJ39445	MPS7
Homo sapiens	RefSeq	XM_001129354.1	ILMN_163721	LOC729113	XM_001129354.1	XM_001129354.1		729113	113422451	XM_001129354.1	LOC729113	XP_001129354.1	ILMN_3303988	0006370142	M	336	CTCCTTCCCCAGCACAGTCTGGACCTGGGCGGACTTTTTGGAAAAGCTTC	11	+	65933895-65933944	11q13.1e	PREDICTED: Homo sapiens hypothetical LOC729113 (LOC729113), mRNA.					
Homo sapiens	RefSeq	NM_016290.3	ILMN_26445	UIMC1	NM_016290.3	NM_016290.3		51720	42476129	NM_016290.3	UIMC1	NP_057374.3	ILMN_1691188	0004900079	S	2416	GCAAGTTTTAGCCCTGCAGTTTTCACCACCAGCACCTACCCAGCATTCTG	5	-	176334127-176334176	5q35.2d	Homo sapiens ubiquitin interaction motif containing 1 (UIMC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12080054] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12080054] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17525340] [evidence IPI]	X2HRIP110; RAP80	X2HRIP110; RAP80
Homo sapiens	RefSeq	NM_005192.2	ILMN_4098	CDKN3	NM_005192.2	NM_005192.2		1033	17981703	NM_005192.2	CDKN3	NP_005183.2	ILMN_1666305	0005260014	S	385	CGCAGATGGAGGGACTCCTGACATAGCCAGCTGCTGTGAAATAATGGAAG	14	+	53948082-53948131	14q22.2b	Homo sapiens cyclin-dependent kinase inhibitor 3 (CDK2-associated dual specificity phosphatase) (CDKN3), mRNA.		Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 8242750] [evidence TAS]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 8127873] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8242750] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8242750] [evidence TAS]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 12745075] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 8242750] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11463386] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [pmid 8242750] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CDI1; KAP; MGC70625; FLJ25787; CIP2; KAP1	CDI1; KAP; MGC70625; FLJ25787; CIP2; KAP1
Homo sapiens	RefSeq	NM_002644.2	ILMN_13933	PIGR	NM_002644.2	NM_002644.2		5284	31377805	NM_002644.2	PIGR	NP_002635.2	ILMN_1685387	0000050600	S	3917	CTCTACAAGAGCCCCTGCCCCTCTGTTGGAGGCACAGTTTTAGAATAAGG	1	-	205168794-205168843	1q32.1h	Homo sapiens polymeric immunoglobulin receptor (PIGR), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2920039] [evidence TAS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC125362; MGC125361	MGC125362; MGC125361
Homo sapiens	RefSeq	NM_007186.2	ILMN_178384	CEP250	NM_007186.2	NM_007186.2		11190	21735547	NM_007186.2	CEP250	NP_009117.2	ILMN_1799011	0005700689	S	8106	AGGAGCCCCAGGTCGGCGGGTGTTCCCAGGAAGAGGAAGTAAATCTGCAA	20	+	33562975-33563024	20q11.22b	Homo sapiens centrosomal protein 250kDa (CEP250), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 9647649] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [pmid 12140259] [evidence IDA]; Any process that modulates the extent to which the two centrioles within a centrosome remain tightly paired; may be mediated by the assembly and disassembly of a proteinaceous linker [goid 30997] [pmid 9647649] [evidence IDA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9647649] [evidence IPI]	CEP2; C-NAP1; MGC88542	CEP2; C-NAP1; MGC88542
Homo sapiens	RefSeq	NM_032472.3	ILMN_4793	PPIL3	NM_032472.3	NM_032472.3		53938	19557632	NM_032472.3	PPIL3	NP_115861.1	ILMN_2285490	0003780048	I	359	CGCGATCTCGGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCAAGTCTT	2	-	201750001-201750050	2q33.1e	Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 3 (PPIL3), transcript variant PPIL3a, mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18474220] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CYPJ	CYPJ
Homo sapiens	RefSeq	XM_291663.4	ILMN_34393	LIPL3	XM_291663.4	XM_291663.4		340654	89031557	XM_291663.4	LIPL3	XP_291663.4	ILMN_1808443	0001410386	A	865	TCTGGTGAACTCCGGGCATTTGACTGGGGGAGTGAGACCAAAAATCTGGA	10	+	90567571-90567620	10q23.31b	PREDICTED: Homo sapiens lipase-like, ab-hydrolase domain containing 3 (LIPL3), mRNA.					
Homo sapiens	RefSeq	NM_182559.1	ILMN_16395	TMPRSS12	NM_182559.1	NM_182559.1		283471	32698939	NM_182559.1	TMPRSS12	NP_872365.1	ILMN_2203149	0006860139	S	1026	CGTGGCCAGATCCTCATAGCTTTATGTTTTGTCATCTTACTAGCAACAAC	12	+	49567510-49567559	12q13.13b	Homo sapiens transmembrane protease, serine 12 (TMPRSS12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MGC57341	MGC57341
Homo sapiens	RefSeq	NM_182559.1	ILMN_16395	TMPRSS12	NM_182559.1	NM_182559.1		283471	32698939	NM_182559.1	TMPRSS12	NP_872365.1	ILMN_2203147	0004290504	S	795	GGTGATGAAGATGGAGCTTTTGATACTTGCAGGGGTGACAGTGGGGGACC	12	+	49565406-49565438:49567312-49567328	12q13.13b	Homo sapiens transmembrane protease, serine 12 (TMPRSS12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MGC57341	MGC57341
Homo sapiens	RefSeq	XM_941681.1	ILMN_174938	GRAP	XM_001132900.1	XM_001132900.1		10750	113431271	XM_001132900.1	GRAP	XP_001132900.1	ILMN_1751386	0005490674	I	1	ATGCCAGGCTGGGACGGCCACCACCTGAGGTGGCCCCGGGTCCTTTCCCC				17p11.2e	PREDICTED: Homo sapiens GRB2-related adaptor protein (GRAP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8647802] [evidence TAS]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8647802] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8647802] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8647802] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_941788.1	ILMN_44234	LOC652357	XM_941788.1	XM_941788.1		652357	89071392	XM_941788.1	LOC652357	XP_946881.1	ILMN_1787244	0000940671	S	230	CCCCAGAGTACACCCAGCACCACCACTGCAAATTCCTACTCCCCAGCTTG					PREDICTED: Homo sapiens similar to promyelocytic leukemia protein isoform 10 (LOC652357), mRNA.					
Homo sapiens	RefSeq	NM_003637.3	ILMN_27053	ITGA10	NM_003637.3	NM_003637.3		8515	38569397	NM_003637.3	ITGA10	NP_003628.2	ILMN_1700144	0000010433	S	4995	ACTAGCAGTCACAGAACCTGTCCTCCCAGGCTGTTCCTGAGGCCTGACCA	1	+	144255050-144255099	1q21.1b	Homo sapiens integrin, alpha 10 (ITGA10), mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 9685391] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 9685391] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 9685391] [evidence TAS]	PRO827	PRO827
Homo sapiens	Unigene	Hs.34747	ILMN_72410	HS.34747	Hs.34747		Hs.34747		960793	D59687			ILMN_1840294	0007560152	S	62	CCTCCACCCTACAAGGTGTGTGCTTGTAACTCAAATTTCCATTTGAGTAA	2	-	155254801-155254850		HUM056E10B Clontech human fetal brain polyA+ mRNA (#6535) Homo sapiens cDNA clone GEN-056E10 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001001888.2	ILMN_19204	VCX3B	NM_001001888.2	NM_001001888.2		425054	149999614	NM_001001888.2	VCX3B	NP_001001888.2	ILMN_3238228	0006840689	S	132	TCCATCCCAGTTAGCATGGAGGGATTTTAGGGCTACCATTGGCTGGGTAG	X	+	8393002-8393031:8393346-8393365	Xp22.31b	Homo sapiens variable charge, X-linked 3B (VCX3B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence ISS]		VCX-C; MGC119815	MGC119815
Homo sapiens	RefSeq	NM_000682.4	ILMN_177753	ADRA2B	NM_000682.5	NM_000682.5		151	110227861	NM_000682.5	ADRA2B	NP_000673.2	ILMN_1677868	0003390286	S	2990	GGGTGTAGAGAGAATGGAGGGGACCAAAAAGAGTCCTTCCTGGGGTGTGG	2	-	96778849-96778898	2q11.2a	Homo sapiens adrenergic, alpha-2B-, receptor (ADRA2B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2164221] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2164221] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 2164221] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2164221] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4938] [pmid 2164221] [evidence TAS]	ADRARL1; ADRA2L1; ALPHA2BAR; ADRA2RL1	ADRARL1; ADRA2L1; ALPHA2BAR; ADRA2RL1
Homo sapiens	RefSeq	NM_001184.2	ILMN_165084	ATR	XM_001131387.1	XM_001131387.1		545	113415284	XM_001131387.1	ATR	XP_001131387.1	ILMN_1810385	0003780364	A	562	ACCTCCATAGAAGAAATGTGATGGGTCATGCTGTGGAATGGCCAGTGGTC				3q23d	PREDICTED: Homo sapiens ataxia telangiectasia and Rad3 related (ATR), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [pmid 14657349] [evidence IDA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8610130] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 9590286] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9590286] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 14657349] [evidence IMP]; Any process that modulates the frequency, rate or extent of protein binding [goid 43393] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14657349] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [pmid 16713580] [evidence IDA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [pmid 16713580] [evidence IDA]		SCKL1; MEC1; FRP1; SCKL
Homo sapiens	RefSeq	NM_018639.3	ILMN_162438	WSB2	NM_018639.3	NM_018639.3		55884	32484989	NM_018639.3	WSB2	NP_061109.1	ILMN_1746664	0006550703	S	2465	GGAGGCCAGTGTAACGTTACATGACTCGTTGAGAAAGTTGAGGAATTTCC	12	-	118470799-118470848	12q24.23a	Homo sapiens WD repeat and SOCS box-containing 2 (WSB2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		SBA2; MGC10210	SBA2; MGC10210
Homo sapiens	RefSeq	NM_001183.3	ILMN_42218	ATP6AP1	NM_001183.4	NM_001183.4		537	89353296	NM_001183.4	ATP6AP1	NP_001174.2	ILMN_1697694	0006590201	S	2028	CGGGAGTGCCGGGCAGGAGCATGGGGTGCTTGGTTGTTTCCTTCCTAATA	X	+	153317985-153318034	Xq28g	Homo sapiens ATPase, H+ transporting, lysosomal accessory protein 1 (ATP6AP1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [pmid 8733135] [evidence TAS]	The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 8733135] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8733135] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	XAP-3; CF2; 16A; ATP6IP1; ATP6S1; Ac45; MGC129781; XAP3; VATPS1	XAP-3; 16A; ATP6IP1; CF2; ORF; ATP6S1; Ac45; MGC129781; XAP3; VATPS1
Homo sapiens	RefSeq	NM_000659.1	ILMN_15495	AIRE	NM_000658.1	NM_000658.1		326	4557292	NM_000658.1	AIRE	NP_000649.1	ILMN_1670282	0002000093	A	1449	GTGCCTGGAAATTAAACCCTGCCCCACTTCTCTACTCTGGAAGTCCCCGG	21	+	44542203-44542252	21q22.3d	Homo sapiens autoimmune regulator (AIRE), transcript variant AIRE-2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9398840] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9398840] [evidence NAS]; An immune response mediated through a body fluid [goid 6959] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9398839] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [evidence IEA]	AIRE1; PGA1; APSI; APS1; APECED	PGA1; APECED; AIRE1; APSI; APS1
Homo sapiens	RefSeq	NM_207033.1	ILMN_17668	EDN3	NM_207033.1	NM_207033.1		1908	46370061	NM_207033.1	EDN3	NP_996916.1	ILMN_2358886	0000670333	A	1503	GAGGGCCACGAGGCGTCGGCTTTAGACACAGATCATAGCTCTACAGGAGT	20	+	57333368-57333417	20q13.32b	Homo sapiens endothelin 3 (EDN3), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 15691296] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8298278] [evidence TAS]	Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IEA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IEA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IEA]; The process by which endothelin modulates the force with which blood passes through the circulatory system. Endothelin is a hormone that is released by the endothelium, and it is a vasoconstrictor [goid 3100] [pmid 2649896] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 1713452] [evidence IDA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8298278] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8630502] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that activates or increases the frequency or rate of heart contraction [goid 10460] [pmid 2649896] [evidence IDA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IEA]; The regulated release of a peptide hormone from secretory granules [goid 30072] [pmid 10770212] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [pmid 10770212] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [pmid 10770212] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [pmid 10770212] [evidence IDA]; A series of molecular signals in which a cell uses a water-soluble inositol phosphate to convert an extracellular signal into a response [goid 48016] [pmid 1917960] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 2649896] [evidence IDA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 10770212] [evidence IDA]; Interacting selectively with an endothelin B receptor [goid 31708] [pmid 1713452] [evidence IPI]	MGC61498; MGC15067; ET3	MGC61498; MGC15067; ET3
Homo sapiens	RefSeq	XM_939175.1	ILMN_35591	LOC650087	XM_939175.1	XM_939175.1		650087	89030612	XM_939175.1	LOC650087	XP_944268.1	ILMN_1721504	0001780435	S	1465	GCTGCCTCCCCAGACATCCCCTCTCCAAGGTCAAGGTCAGAGCTGTCAGA					PREDICTED: Homo sapiens similar to centrosome-associated protein 350 (LOC650087), mRNA.					
Homo sapiens	RefSeq	NM_014929.2	ILMN_12269	FASTKD2	NM_014929.2	NM_014929.2		22868	45267831	NM_014929.2	FASTKD2	NP_055744.2	ILMN_2053567	0002750091	S	2378	CCAGAAGGGTTATTTTTCCAACCACACCTATTCCCTCTAGTGCCCAGATA	2	+	207364959-207365008	2q33.3b-q33.3c	Homo sapiens FAST kinase domains 2 (FASTKD2), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	KIAA0971	KIAA0971
Homo sapiens	RefSeq	XM_001721688.1	ILMN_345576	LOC100129502	XM_001721688.1	XM_001721688.1		100129502	169209309	XM_001721688.1	LOC100129502	XP_001721740.1	ILMN_3265143	0000520192	M	2914	GACTGAGATGGGTGAATCACTTGAGGTCAGGAGTTTGAGACCAGACTGGC				15q26.1b	PREDICTED: Homo sapiens hypothetical protein LOC100129502 (LOC100129502), mRNA.					
Homo sapiens	RefSeq	NM_001942.1	ILMN_7091	DSG1	NM_001942.2	NM_001942.2		1828	119703743	NM_001942.2	DSG1	NP_001933.2	ILMN_1794662	0004250259	S	3991	CTTCAGGGTAAACTAGCAATGCCTGAGCCTGAACCTTAATGTGGGGCCTC	18	+	27189936-27189985	18q12.1d	Homo sapiens desmoglein 1 (DSG1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16286477] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16286477] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [pmid 1711210] [evidence NAS]	The aggregation, arrangement and bonding together of a set of components to form a junction between cells [goid 7043] [pmid 12485422] [evidence NAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 1770008] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 1770008] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11781826] [evidence NAS]; Interacting selectively with a toxin, a poisonous substance that causes damage to biological systems. Toxins are differentiated from simple chemical poisons and vegetable alkaloids by their high molecular weight and antigenicity (they elicit an antibody response) [goid 15643] [pmid 12582396] [evidence NAS]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]	CDHF4; DG1; DSG	CDHF4; DG1; DSG
Homo sapiens	RefSeq	XR_038112.1	ILMN_350778	LOC100134710	XR_038112.1	XR_038112.1		100134710	169170790	XR_038112.1	LOC100134710		ILMN_3247957	0003370520	S	1975	CCCCCCTGCGATGAGGGTAGCAACAGCCGGGGGTGGAAGAGGGGATAACT	7	+	149076597-149076646		PREDICTED: Homo sapiens misc_RNA (LOC100134710), miscRNA.					
Homo sapiens	RefSeq	NM_003918.1	ILMN_24869	GYG2	NM_003918.1	NM_003918.1		8908	5453673	NM_003918.1	GYG2	NP_003909.1	ILMN_1684017	0004830750	S	3082	GTACAAGATGTGGGTGATGGAGGGGCTGTTTCTTTTTCCGTGTGGGTGGT	X	+	2810548-2810597	Xp22.33c	Homo sapiens glycogenin 2 (GYG2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9346895] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9691087] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12051921] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8613547] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [pmid 9346895] [evidence TAS]	Catalysis of the reaction: UDP-glucose + glycogenin = UDP + glucosylglycogenin [goid 8466] [pmid 12051921] [evidence EXP]; Catalysis of the reaction: UDP-glucose + glycogenin = UDP + glucosylglycogenin [goid 8466] [pmid 9346895] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	GN-2; GN2	GN-2; GN2
Homo sapiens	RefSeq	NM_198503.2	ILMN_11070	KCNT2	NM_198503.2	NM_198503.2		343450	41349442	NM_198503.2	KCNT2	NP_940905.2	ILMN_2053345	0003140259	S	5806	CCTTGTAGCCCAATGGGAATTGATTCTGTTTATTGTCTGTACCATTTTGC	1	-	196194966-196195015	1q31.3b-q31.3c	Homo sapiens potassium channel, subfamily T, member 2 (KCNT2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC119612; MGC119613; MGC119611; KCa4.2; SLICK; SLO2.1; RP11-58O13.1; MGC119610	MGC119612; MGC119613; MGC119611; KCa4.2; SLICK; SLO2.1; RP11-58O13.1; MGC119610
Homo sapiens	RefSeq	NM_198503.2	ILMN_11070	KCNT2	NM_198503.2	NM_198503.2		343450	41349442	NM_198503.2	KCNT2	NP_940905.2	ILMN_1793919	0002970722	S	3379	CTGGCCTACCTTCCAAACAGTGAGCCCAGTCGAAGAAACAGCATCTGCAA	1	-	196197393-196197442	1q31.3b-q31.3c	Homo sapiens potassium channel, subfamily T, member 2 (KCNT2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC119612; MGC119613; MGC119611; KCa4.2; SLICK; SLO2.1; RP11-58O13.1; MGC119610	MGC119612; MGC119613; MGC119611; KCa4.2; SLICK; SLO2.1; RP11-58O13.1; MGC119610
Homo sapiens	RefSeq	NM_003705.2	ILMN_21041	SLC25A12	NM_003705.2	NM_003705.2		8604	21361102	NM_003705.2	SLC25A12	NP_003696.2	ILMN_1788053	0000460180	S	2654	TGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGATGTG	2	-	172349372-172349421	2q31.1d	Homo sapiens solute carrier family 25 (mitochondrial carrier, Aralar), member 12 (SLC25A12), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9722566] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11566871] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9722566] [evidence NAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of aspartate, the anion of aspartic acid, into, out of, within or between cells [goid 15810] [pmid 11566871] [evidence IDA]; The directed movement of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid, into, out of, within or between cells [goid 15813] [pmid 11566871] [evidence IDA]; The process of transferring reducing equivalents from the cytosol into the mitochondria; NADH is used to synthesise malate in the cytosol; this compound is then transported into the mitochondria where it is converted to oxaloacetate using NADH, the oxaloacetate reacts with gluamate to form aspartate, and the aspartate then returns to the cytosol to complete the cycle [goid 43490] [pmid 11566871] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [pmid 11566871] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of L-glutamate from one side of a membrane to the other. L-glutamate is the anion of 2-aminopentanedioic acid [goid 5313] [pmid 11566871] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9722566] [evidence IDA]; Catalysis of the transfer of L-aspartate from one side of a membrane to the other. L-aspartate is the anion derived from aspartic acid [goid 15183] [pmid 11566871] [evidence IDA]	ARALAR1; ARALAR	ARALAR1; ARALAR
Homo sapiens	RefSeq	NM_024682.1	ILMN_20273	TBC1D17	NM_024682.1	NM_024682.1		79735	13375951	NM_024682.1	TBC1D17	NP_078958.1	ILMN_1756542	0002510441	S	1813	ACATCAACGAGCTGACTATGAAGCTGAGCGTGGAGGACGTGCTGACCCGC	19	+	50391489-50391538	19q13.33b	Homo sapiens TBC1 domain family, member 17 (TBC1D17), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	FLJ12168	FLJ12168
Homo sapiens	RefSeq	NM_173854.4	ILMN_2825	SLC41A1	NM_173854.4	NM_173854.4		254428	51702205	NM_173854.4	SLC41A1	NP_776253.3	ILMN_1656186	0000580332	S	4584	AGGCCCTGAGTGAGCAGAGGAGGACTGTAGGGTGAGAGGGAAAGAAAATG	1	-	205758441-205758490	1q32.1g	Homo sapiens solute carrier family 41, member 1 (SLC41A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	MgtE	MgtE
Homo sapiens	RefSeq	XM_926051.1	ILMN_46075	LOC642548	XM_926051.1	XM_926051.1		642548	89037940	XM_926051.1	LOC642548	XP_931144.1	ILMN_1810082	0007400703	A	1032	ATCAGAGACCACCCAGACACAAGACTCCCTGCAGCTGTGCTGGGGTAGCA	15	+	19634996-19635045		PREDICTED: Homo sapiens similar to Ribosome biogenesis protein BMS1 homolog, transcript variant 1 (LOC642548), mRNA.					
Homo sapiens	RefSeq	NM_003815.3	ILMN_23734	ADAM15	NM_003815.3	NM_003815.3		8751	46909589	NM_003815.3	ADAM15	NP_003806.3	ILMN_2384544	0001980553	A	2585	GGCTTCAAGAGGCGGGCGTGCCCTCTGGAGTCCCCTACCATGACTGAAGG	1	+	153301641-153301690	1q21.3e-q22a	Homo sapiens ADAM metallopeptidase domain 15 (ADAM15), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10531379] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10531379] [evidence NAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 9516430] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10531379] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 10531379] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MDC15	MDC15
Homo sapiens	RefSeq	NM_175834.2	ILMN_23958	KRT79	NM_175834.2	NM_175834.2		338785	39753955	NM_175834.2	KRT79	NP_787028.1	ILMN_2204940	0006900376	S	1941	GAGAGAAATTGGGAGTGGTCCCCAAAGACCCTTCAACCTCCCCAGTCCCC	12	-	53215306-53215355	12q13.13d	Homo sapiens keratin 79 (KRT79), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	K6L; FLJ26646; KRT6L	K6L; FLJ26646; KRT6L
Homo sapiens	RefSeq	NM_033180.1	ILMN_179119	OR51B2	NM_033180.3	NM_033180.3		79345	110350668	NM_033180.3	OR51B2	NP_149420.3	ILMN_1770306	0001450209	S	573	CACGTGCTTTCTGCCTCCACCAAGAAATCATGAGACTGGCTTGTGCTGAC				11p15.4c	Homo sapiens olfactory receptor, family 51, subfamily B, member 2 (OR51B2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	HOR5'Beta3; OR51B1P	HOR5'Beta3; OR51B1P
Homo sapiens	RefSeq	NM_021212.1	ILMN_32113	CREBZF	NM_001039618.1	NM_001039618.1		58487	88900494	NM_001039618.1	CREBZF	NP_001034707.1	ILMN_1784847	0002120279	S	3061	TGAACCTGCTTATACCTAAGGGCAGGAGCAAGCCCCTCACAATGCAGCTG	11	-	85050711-85050760	11q14.1e	Homo sapiens CREB/ATF bZIP transcription factor (CREBZF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15705566] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 10871379] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15705566] [evidence IMP]; Any epigenetic process that stops, prevents or reduces the rate of gene expression [goid 45814] [pmid 15705566] [evidence IEP]; Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51090] [pmid 15705566] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 15705566] [evidence IMP]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	ZF	
Homo sapiens	RefSeq	NM_022842.3	ILMN_15414	CDCP1	NM_022842.3	NM_022842.3		64866	30410804	NM_022842.3	CDCP1	NP_073753.3	ILMN_1724941	0005260367	I	5797	ACTTGTCCCCTGGTTCAGTAGAGGCCCCGGTTTCCCAGTTGTTGACTGTG	3	-	45125088-45125137	3p21.31k	Homo sapiens CUB domain containing protein 1 (CDCP1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			SIMA135; TRASK; CD318	SIMA135; TRASK; CD318
Homo sapiens	RefSeq	NM_198499.1	ILMN_24787	FLJ46156	NM_198499.1	NM_198499.1		341883	38348311	NM_198499.1	FLJ46156	NP_940901.1	ILMN_1768430	0001990010	S	4362	TCGCTTATTCCTGTTACCCACTCTCCTATGGATGGCAGATCATTTGGCCA	14	+	59589674-59589676:59594349-59594395	14q23.1c	Homo sapiens FLJ46156 protein (FLJ46156), mRNA.					
Homo sapiens	RefSeq	NM_003751.2	ILMN_1654	EIF3B	NM_003751.3	NM_003751.3		8662	83367073	NM_003751.3	EIF3B	NP_003742.2	ILMN_1715636	0006290603	S	2636	GCGCCTGGATTCTGCCATTGCGACACATTTTTGTGCCTTTCAGCCCCTGG	7	+	2386533-2386582	7p22.2c	Homo sapiens eukaryotic translation initiation factor 3, subunit B (EIF3B), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex [goid 5852] [pmid 8995410] [evidence TAS]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [pmid 8995410] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 8995410] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14688252] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11169732] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14688252] [evidence IPI]	EIF3-P116; MGC131875; EIF3-P110; EIF3S9; PRT1; MGC104664; EIF3-ETA; eIF3b	EIF3-P116; EIF3-P110; PRT1; MGC104664; EIF3-ETA
Homo sapiens	RefSeq	NM_001085398.1	ILMN_309738	TLX1NB	NM_001085398.1	NM_001085398.1		100038246	145966684	NM_001085398.1	TLX1NB	NP_001078867.1	ILMN_3235350	0000730427	S	1600	ATCCAGAATCCGCCTACGGAGAACACTGAGGAACCTTGGTGGAGGCAGGG	10	-	102849810-102849859	10q24.31a	Homo sapiens TLX1 neighbor (TLX1NB), mRNA.					
Homo sapiens	RefSeq	NM_182925.1	ILMN_5432	FLT4	NM_182925.1	NM_182925.1		2324	33667110	NM_182925.1	FLT4	NP_891555.1	ILMN_1741673	0003890195	I	4722	ATTATACGCTGGCAACACAGAGGCAGCCCGCACACCTGCGAGTGGCAAAC	5	-	179945817-179945817:179947996-179947999:179962143-179962187	5q35.3f	Homo sapiens fms-related tyrosine kinase 4 (FLT4), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8386825] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11574540] [evidence IGI]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [pmid 11574540] [evidence IGI]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [pmid 9012504] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [pmid 9012504] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16530705] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PCL; FLT41; VEGFR3	PCL; FLT41; VEGFR3
Homo sapiens	RefSeq	NM_012211.3	ILMN_6740	ITGA11	NM_012211.3	NM_012211.3		22801	52485889	NM_012211.3	ITGA11	NP_036343.3	ILMN_2406084	0000520670	A	4742	CTGTGCAGCCTTGGTGGCAAATATCTCATCTGCCGGCCCCCAGGACAAGT	15	-	66381283-66381332	15q23a	Homo sapiens integrin, alpha 11 (ITGA11), transcript variant 2, mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 10486209] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The orderly movement of cells from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate [goid 6929] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10486209] [evidence TAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 10464311] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 10464311] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 10464311] [evidence TAS]	HsT18964	HsT18964
Homo sapiens	RefSeq	NR_004407.1	ILMN_350282	RNU11	NR_004407.1	NR_004407.1		26824	161169046	NR_004407.1	RNU11		ILMN_3245103	0004200379	S	82	AGCATAATTTTTTGGTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCC	1	+	28975193-28975242		Homo sapiens RNA, U11 small nuclear (RNU11), small nuclear RNA.				U11	U11
Homo sapiens	RefSeq	XM_940184.1	ILMN_36137	LOC651065	XM_940184.1	XM_940184.1		651065	89042942	XM_940184.1	LOC651065	XP_945277.1	ILMN_1807872	0001940379	S	602	GTGTTGGAGCCCACATGCCTTGCCAGAGGCAGCCTTCCAAGTTTTCTACC					PREDICTED: Homo sapiens similar to pleckstrin homology domain containing, family M (with RUN domain) member 1 (LOC651065), mRNA.					
Homo sapiens	RefSeq	NM_153838.1	ILMN_12597	GPR115	NM_153838.3	NM_153838.3		221393	116517327	NM_153838.3	GPR115	NP_722580.3	ILMN_1684653	0005270437	S	1996	GTTGCTGTCAACACTCAGAGGCCCTCTATTGGCAGTTCCAAGTCTCAGGA	6	+	47682719-47682768	6p12.3d	Homo sapiens G protein-coupled receptor 115 (GPR115), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	PGR18; FLJ38076	PGR18; FLJ38076
Homo sapiens	RefSeq	XM_938584.1	ILMN_137461	LOC649503	XM_938584.1	XM_938584.1		649503	89059231	XM_938584.1	LOC649503	XP_943677.1	ILMN_1688588	0005090112	S	1613	CCTCCCTCAGAAGCCTCCCAGAGTGACAGGAAGGTCAGAGGCCCCAGGGA					PREDICTED: Homo sapiens hypothetical protein LOC649503 (LOC649503), mRNA.					
Homo sapiens	RefSeq	NM_030763.1	ILMN_30051	NSBP1	NM_030763.1	NM_030763.1		79366	13540522	NM_030763.1	NSBP1	NP_110390.1	ILMN_2105361	0006380634	S	1677	ACAATGTTGTGTCCACTGTTTAATTCCAGAGAATTTTTATCACCCAAATA	X	-	80255994-80256043	Xq21.1c	Homo sapiens nucleosomal binding protein 1 (NSBP1), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11161810] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 11161810] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 11161810] [evidence NAS]		
Homo sapiens	RefSeq	NM_030763.1	ILMN_30051	NSBP1	NM_030763.1	NM_030763.1		79366	13540522	NM_030763.1	NSBP1	NP_110390.1	ILMN_1749799	0003400315	S	66	ACAATGCCCAAAAGAAAGGCTGCAGGTCAAGGTGATATGAGGCAGGAGCC	X	-	80260912-80260914:80261943-80261972:80263690-80263704:80263705-80263706	Xq21.1c	Homo sapiens nucleosomal binding protein 1 (NSBP1), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11161810] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 11161810] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 11161810] [evidence NAS]		
Homo sapiens	RefSeq	NM_152698.1	ILMN_3268	FLJ38377	NM_152698.1	NM_152698.1		205147	22749392	NM_152698.1	FLJ38377	NP_689911.1	ILMN_2122153	0004220242	S	2874	GCAGAGGGTAGCATGTTCATGTGGAGGCATCCTTGCCTGAACCCACCAGC	2	+	131238835-131238884	2q21.1c	Homo sapiens hypothetical protein FLJ38377 (FLJ38377), mRNA.					
Homo sapiens	RefSeq	XM_001719106.1	ILMN_340803	LOC100127930	XM_001719106.1	XM_001719106.1		100127930	169210044	XM_001719106.1	LOC100127930	XP_001719158.1	ILMN_3183383	0000150161	A	347	AGCCCGAGGCTCTCCGTGCCCTTCGCGCCGGTCAAGAACTGTGGAATCTT	16	+	45735877-45735906:45748967-45748986	16q12.1a	PREDICTED: Homo sapiens hypothetical LOC100127930 (LOC100127930), mRNA.					
Homo sapiens	RefSeq	NM_001098533.1	ILMN_308907	CDK10	NM_001098533.1	NM_001098533.1		8558	148728179	NM_001098533.1	CDK10	NP_001092003.1	ILMN_3306950	0006130762	A	1532	CAGGACTCCAGATGAGGACAAGAGGGACAAGGTATGGGGTGGGAGCCACA	16	+	88290065-88290114	16q24.3b	Homo sapiens cyclin-dependent kinase 10 (CDK10), transcript variant c, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [pmid 8208557] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8208557] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [pmid 8084611] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18242510] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PISSLRE	PISSLRE
Homo sapiens	RefSeq	NM_000591.1	ILMN_2570	CD14	NM_000591.2	NM_000591.2		929	91105163	NM_000591.2	CD14	NP_000582.1	ILMN_1740015	0007000369	S	1294	CAGCCTGACGAGCTGCCCGAGGTGGATAACCTGACACTGGACGGGAATCC	5	-	140011579-140011628	5q31.3b	Homo sapiens CD14 molecule (CD14), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9665271] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9665271] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9548256] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]	A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [evidence IEA]; The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [pmid 9548256] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9548256] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8798531] [evidence TAS]	Combining with an opsonin to initiate a change in cell activity [goid 1847] [pmid 2402637] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a peptidoglycan to initiate a change in cell activity [goid 16019] [pmid 8798531] [evidence TAS]		
Homo sapiens	RefSeq	NM_032813.2	ILMN_1347	TMTC4	NM_032813.2	NM_032813.2		84899	118766329	NM_032813.2	TMTC4	NP_116202.2	ILMN_2259223	0002510390	I	239	TGCGGCCTGTTTCATCTCTGGATTGTAAATCTGAGCCTCCTTCTGGCCCC	13	-	101322641-101322690	13q32.3c	Homo sapiens transmembrane and tetratricopeptide repeat containing 4 (TMTC4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ22153; FLJ14624	FLJ22153; FLJ14624
Homo sapiens	RefSeq	NM_032813.2	ILMN_1347	TMTC4	NM_032813.2	NM_032813.2		84899	118766329	NM_032813.2	TMTC4	NP_116202.2	ILMN_2344182	0001780133	A	2170	CGTGGATGCCTTGAATGCGTGGAGAAATGCCACCGTGCTGAAACCAGAGC	13	-	101266614-101266663	13q32.3c	Homo sapiens transmembrane and tetratricopeptide repeat containing 4 (TMTC4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ22153; FLJ14624	FLJ22153; FLJ14624
Homo sapiens	RefSeq	XM_001718401.1	ILMN_342062	LOC728558	XM_001718401.1	XM_001718401.1		728558	169201695	XM_001718401.1	LOC728558	XP_001718453.1	ILMN_3301236	0000020747	M	233	CGCCCTTCTTGCCAGGGGTGTCCTATAGACTTTGTCATGGAGTGAAACAG				10q23.33d	PREDICTED: Homo sapiens hypothetical LOC728558 (LOC728558), mRNA.					
Homo sapiens	RefSeq	NM_138285.3	ILMN_17545	NUP35	NM_138285.3	NM_138285.3		129401	56788372	NM_138285.3	NUP35	NP_612142.2	ILMN_1701374	0004850521	A	890	GCCTTTACACCACCAATCAAAACTCTAGGTACACCAACACAACCTGGAAG	2	+	183732509-183732558	2q32.1a	Homo sapiens nucleoporin 35kDa (NUP35), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 12228227] [evidence EXP]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		MP44; NP44	MP44; NP44
Homo sapiens	RefSeq	NM_138285.3	ILMN_17545	NUP35	NM_138285.3	NM_138285.3		129401	56788372	NM_138285.3	NUP35	NP_612142.2	ILMN_1815723	0002100452	I	516	GTCCAGCAAGTATCGGTCAGCCACGAAAGACGACATTATCTCCTGCCCAG	2	+	183724496-183724545	2q32.1a	Homo sapiens nucleoporin 35kDa (NUP35), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 12228227] [evidence EXP]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		MP44; NP44	MP44; NP44
Homo sapiens	RefSeq	XM_930072.3	ILMN_31575	LOC644191	XM_930072.3	XM_930072.3		644191	169210969	XM_930072.3	LOC644191	XP_935165.1	ILMN_3209193	0006960373	A	41	AAAAGAAGGAACAATGGTCGTGCCAAAAAGGGCCGCGGCCACGTGCAGCC	17	+	41041729-41041778	17q21.31d	PREDICTED: Homo sapiens similar to hCG15685, transcript variant 1 (LOC644191), mRNA.					
Homo sapiens	RefSeq	NM_080650.2	ILMN_25283	ATPBD4	NM_080650.2	NM_080650.2		89978	42734367	NM_080650.2	ATPBD4	NP_542381.1	ILMN_1782085	0004180059	S	1506	CCCATATACCCTCTACCTCCACACATTCACAGCCTCCCCTACCGTCAATG	15	-	33450913-33450962	15q14b	Homo sapiens ATP binding domain 4 (ATPBD4), mRNA.				MGC14798	MGC14798
Homo sapiens	RefSeq	NM_080650.2	ILMN_25283	ATPBD4	NM_080650.2	NM_080650.2		89978	42734367	NM_080650.2	ATPBD4	NP_542381.1	ILMN_2140207	0002710520	S	2013	TTGTCCATGCACCTATTGAAGAACATCTCAGTTGCTTCCATGTTTTGGCG	15	-	33450406-33450455	15q14b	Homo sapiens ATP binding domain 4 (ATPBD4), mRNA.				MGC14798	MGC14798
Homo sapiens	RefSeq	XR_000601.1	ILMN_35501	FLJ37307	XR_000601.1	XR_000601.1		283521	89036737	XR_000601.1	FLJ37307		ILMN_1723320	0007320241	A	3986	GTCTTCCTTGAATACCCTGGGGGAAGAGAATCCTCCAGTCCTTGGGATGC	13	-	51285425-51285474	13q14.3c	PREDICTED: Homo sapiens hypothetical protein FLJ37307 (FLJ37307), misc RNA.					
Homo sapiens	RefSeq	NM_014884.1	ILMN_10407	SFRS14	NM_014884.2	NM_014884.2		10147	142365464	NM_014884.2	SFRS14	NP_055699.1	ILMN_1711270	0000070019	I	3404	GGACAACAGGCATCTGGAAGTGCTCTCTCGCCACTCTGGGTGCTTTACTG	19	-	18962888-18962937	19p13.11b	Homo sapiens splicing factor, arginine/serine-rich 14 (SFRS14), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	DKFZp779L2418	DKFZp779L2418
Homo sapiens	RefSeq	XR_038779.1	ILMN_350770	LOC100127893	XR_038779.1	XR_038779.1		100127893	169167950	XR_038779.1	LOC100127893		ILMN_3271204	0000630520	M	204	TTGAATGGCAAGGATGGCGAGAAAAGCTGGCAACTTCTGTGTACCTGCAG				5q14.1e	PREDICTED: Homo sapiens misc_RNA (LOC100127893), miscRNA.					
Homo sapiens	RefSeq	NM_019077.2	ILMN_2145	UGT1A7	NM_019077.2	NM_019077.2		54577	41282212	NM_019077.2	UGT1A7	NP_061950.2	ILMN_1764607	0001340408	S	556	CCTCTTTCCTATGTCCCCAGACTTCTCTTAGGGTTCTCAGACGCCATGAC	2	+	234255878-234255927	2q37.1d	Homo sapiens UDP glucuronosyltransferase 1 family, polypeptide A7 (UGT1A7), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]	UGT1G; UDPGT; UGT1*7	UGT1G; UDPGT; UGT1*7
Homo sapiens	RefSeq	XM_927060.1	ILMN_26556	ZNF302	NM_001012320.1	NM_001012320.1		55900	59850750	NM_001012320.1	ZNF302	NP_001012320.1	ILMN_1702188	0006220753	S	1480	ATGCATTTGAGAAATCACATTAGATTGAAACCCTACGAATGCAGTATATG	19	+	35176182-35176231	19q13.11c	Homo sapiens zinc finger protein 302 (ZNF302), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSD16; ZNF327; MST154; ZNF135L; ZNF140L; MSTP154	
Homo sapiens	RefSeq	NM_001012320.1	ILMN_26556	ZNF302	NM_001012320.1	NM_001012320.1		55900	59850750	NM_001012320.1	ZNF302	NP_001012320.1	ILMN_2414254	0001240605	A	2094	TGTGGGAAAGACTATAGGCAATAGGAATCTCCTGCAAACTCCTACAGGAG	19	+	35176796-35176845	19q13.11c	Homo sapiens zinc finger protein 302 (ZNF302), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSD16; ZNF327; MST154; ZNF135L; ZNF140L; MSTP154	HSD16; ZNF327; MST154; ZNF135L; ZNF140L; MSTP154
Homo sapiens	RefSeq	NM_014822.1	ILMN_7795	SEC24D	NM_014822.1	NM_014822.1		9871	7662658	NM_014822.1	SEC24D	NP_055637.1	ILMN_1656386	0004250451	S	3418	CCAGGAAGAGATGGCATTTAGAACTTCAGCTTTGGTGCTCAGGTATAAAG	4	-	119863949-119863998	4q26f	Homo sapiens SEC24 related gene family, member D (S. cerevisiae) (SEC24D), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state [goid 30127] [pmid 10329445] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. COPII is best characterized in S. cerevisiae, where the subunits are called Sar1p, Sec13p, Sec31p, Sec23p, and Sec24p. Vesicles with COPII coats are found associated with endoplasmic reticulum (ER) membranes at steady state [goid 30127] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 10329445] [evidence NAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 11252894] [evidence EXP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ43974; KIAA0755	FLJ43974; KIAA0755
Homo sapiens	RefSeq	XM_934022.1	ILMN_168450	C1ORF152	XM_001134421.1	XM_001134421.1		200025	113411384	XM_001134421.1	C1orf152	XP_001134421.1	ILMN_1676016	0003890634	I	242	TATTTCTGGCCCCCCAGTGTCAGCCCATTCATGACAAAGCTTGACCAGTC	1	+	146716070-146716119	1q21.1d	PREDICTED: Homo sapiens chromosome 1 open reading frame 152 (C1orf152), mRNA.					
Homo sapiens	Unigene	Hs.543561	ILMN_107129	HS.543561	Hs.543561		Hs.543561		1210008	N62079			ILMN_1880245	0001740437	S	253	GCTCCAGGTCACACAGCAAGTGATGGAAGGTCTTGAACCCTGCTTGACTC	4	-	79829300-79829349		yz85f09.s1 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone IMAGE:289865 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005170.2	ILMN_162982	ASCL2	NM_005170.2	NM_005170.2		430	42716308	NM_005170.2	ASCL2	NP_005161.1	ILMN_1723412	0007200435	S	1604	AAGAACCCTTGACCTGGGGCGTAATAAAGATGACCTGGACCCCTGCCCCC	11	-	2289923-2289972	11p15.5a	Homo sapiens achaete-scute complex homolog 2 (Drosophila) (ASCL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8751384] [evidence NAS]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8751384] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence NAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8751384] [evidence NAS]	ASH2; MASH2; HASH2	ASH2; MASH2; HASH2
Homo sapiens	RefSeq	NM_014271.2	ILMN_7989	IL1RAPL1	NM_014271.2	NM_014271.2		11141	27894335	NM_014271.2	IL1RAPL1	NP_055086.1	ILMN_2160428	0004670653	S	3134	AGCACCGGATTCTTTCTCGGGTTCTGCCTAGCATCAACTGGGCCACGTCG	X	+	29884271-29884320	Xp21.3a-p21.2a	Homo sapiens interleukin 1 receptor accessory protein-like 1 (IL1RAPL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10471494] [evidence NAS]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [pmid 10471494] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]	MRX34; IL1RAPL; OPHN4; MRX21; TIGIRR-2; IL1R8	MRX34; OPHN4; IL1R8; IL1RAPL; MRX21; TIGIRR-2
Homo sapiens	RefSeq	NM_014341.1	ILMN_17681	MTCH1	NM_014341.1	NM_014341.1		23787	7657344	NM_014341.1	MTCH1	NP_055156.1	ILMN_1703006	0003460181	S	1733	GGTGATGCCTCGCGTACAGGATCTGGTTACCTGTGCAGTTGTGAATACCC	6	-	37043993-37044042	6p21.2c	Homo sapiens mitochondrial carrier homolog 1 (C. elegans) (MTCH1), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 10551805] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12377771] [evidence IMP]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 12377771] [evidence IMP]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 10551805] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 12377771] [evidence IEP]; The process by which voltage-gated ion channels become localized to distinct subcellular domains in the neuron. Specific targeting, clustering, and maintenance of these channels in their respective domains are essential to achieve high conduction velocities of action potential propagation [goid 45161] [pmid 10551805] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12377771] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 10551805] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	PIG60; MGC131998; CGI-64; PSAP	PIG60; MGC131998; CGI-64; PSAP
Homo sapiens	RefSeq	NM_001142573.1	ILMN_369946	IMPDH1	NM_001142573.1	NM_001142573.1		3614	217035145	NM_001142573.1	IMPDH1	NP_001136045.1	ILMN_3306977	0000360162	A	1663	GAGGCCGAGGTGGTGGAGGGGATGCACCCCAGTGTCCACTTTTGGGCACA	7	-	128032999-128033048	7q32.1a	Homo sapiens IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1), transcript variant 5, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7903306] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 7903306] [evidence EXP]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 1969416] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_006277.1	ILMN_182280	ITSN2	NM_006277.1	NM_006277.1		50618	22325384	NM_006277.1	ITSN2	NP_006268.1	ILMN_2317739	0004920180	A	3498	CAAGTGGGTGGTGGCAAGGAGAGTTACAGGCCAGAGGAAAAAAGCGACAG	2	-	24323245-24323266:24325002-24325029	2p23.3d	Homo sapiens intersectin 2 (ITSN2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9630982] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	SWA; SH3P18; KIAA1256; SWAP; SH3D1B	SWA; SH3P18; KIAA1256; SWAP; SH3D1B
Homo sapiens	RefSeq	NM_014317.3	ILMN_26359	PDSS1	NM_014317.3	NM_014317.3		23590	50659085	NM_014317.3	PDSS1	NP_055132.2	ILMN_2080611	0003120086	S	1219	CAGTAAACTTCGACCATCCCCAGAAAGAGATGCCCTCATTCAGCTTTCAG	10	+	27026747-27026775:27031097-27031117	10p12.1b	Homo sapiens prenyl (decaprenyl) diphosphate synthase, subunit 1 (PDSS1), mRNA.		The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [pmid 16262699] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [pmid 16262699] [evidence IDA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated nonidentical subunits [goid 51290] [evidence IEA]	Catalysis of the reaction: all-trans-hexaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-heptaprenyl diphosphate [goid 10] [pmid 16262699] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16262699] [evidence IDA]; Catalysis of the reaction: all-trans-octaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-nonaprenyl diphosphate [goid 50347] [evidence IEA]	TPT; hDPS1; RP13-16H11.3; COQ1; TPRT; MGC70953	hDPS1; RP13-16H11.3; COQ1; TPRT; MGC70953; TPT
Homo sapiens	RefSeq	NM_014317.3	ILMN_26359	PDSS1	NM_014317.3	NM_014317.3		23590	50659085	NM_014317.3	PDSS1	NP_055132.2	ILMN_1703324	0000430192	S	1099	GCGACGGTTCAGTTTGCCTGGAGATGTAGACAGAGCTCGACAGTATGTAC	10	+	27026627-27026646:27026647-27026676	10p12.1b	Homo sapiens prenyl (decaprenyl) diphosphate synthase, subunit 1 (PDSS1), mRNA.		The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [pmid 16262699] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [pmid 16262699] [evidence IDA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated nonidentical subunits [goid 51290] [evidence IEA]	Catalysis of the reaction: all-trans-hexaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-heptaprenyl diphosphate [goid 10] [pmid 16262699] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16262699] [evidence IDA]; Catalysis of the reaction: all-trans-octaprenyl diphosphate + isopentenyl diphosphate = diphosphate + all-trans-nonaprenyl diphosphate [goid 50347] [evidence IEA]	TPT; hDPS1; RP13-16H11.3; COQ1; TPRT; MGC70953	hDPS1; RP13-16H11.3; COQ1; TPRT; MGC70953; TPT
Homo sapiens	RefSeq	NM_002976.1	ILMN_183477	SCN7A	NM_002976.2	NM_002976.2		6332	111378392	NM_002976.2	SCN7A	NP_002967.2	ILMN_1773271	0004210274	S	4804	CATTGCTTTGGACCTCCCCATGGCTGTTGGGGACAGAATTCATTGCCTCG	2	-	167262412-167262461	2q24.3d	Homo sapiens sodium channel, voltage-gated, type VII, alpha (SCN7A), mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 1317577] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 1317577] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 1317577] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SCN6A	SCN6A
Homo sapiens	Unigene	Hs.382669	ILMN_88966	HS.382669	Hs.382669		Hs.382669		20987394	BC021745			ILMN_1881668	0004280138	S	1247	CTGACACTGCACAGAAAGTGGGTCGGTCCTCTGACAGGCTTGAAAAATGC	21	-	33405915-33405964		Homo sapiens cDNA clone IMAGE:4828632					
Homo sapiens	RefSeq	NM_015116.1	ILMN_19304	LRCH1	NM_015116.1	NM_015116.1		23143	33859669	NM_015116.1	LRCH1	NP_055931.1	ILMN_1683692	0000940397	S	3630	GGCCTTGTTCCAAGGTCAAGGCAGCCTCCTTATTTTACATGCTGTTTGCC	13	+	46215198-46215247	13q14.13a-q14.2a	Homo sapiens leucine-rich repeats and calponin homology (CH) domain containing 1 (LRCH1), mRNA.		The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC [goid 9401] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CHDC1; KIAA1016	CHDC1; KIAA1016
Homo sapiens	RefSeq	NM_015116.1	ILMN_19304	LRCH1	NM_015116.1	NM_015116.1		23143	33859669	NM_015116.1	LRCH1	NP_055931.1	ILMN_2199614	0007610364	S	3955	CCTCCTGACTTTGTGTTGATTGGTGAAATGCAGGGTATGTGGAAGTTATC	13	+	46215523-46215572	13q14.13a-q14.2a	Homo sapiens leucine-rich repeats and calponin homology (CH) domain containing 1 (LRCH1), mRNA.		The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC [goid 9401] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CHDC1; KIAA1016	CHDC1; KIAA1016
Homo sapiens	Unigene	Hs.258266	ILMN_83698	HS.258266	Hs.258266		Hs.258266		28146982	CB160856			ILMN_1879857	0006860474	S	72	CTGTCCTTATGGTCCACTCTTAGTGTGACCTTGAATTTATGGCAGGTAGC	16	-	45170550-45170599		K-EST0220612 L18POOL1n1 Homo sapiens cDNA clone L18POOL1n1-33-F12 5, mRNA sequence					
Homo sapiens	RefSeq	NM_152910.3	ILMN_26565	DGKH	NM_152910.3	NM_152910.3		160851	32307168	NM_152910.3	DGKH	NP_690874.2	ILMN_1714087	0001010162	A	3441	GCAGAAGACAAGTTCACAGCCTGGATCTGGGGATACCGAAAGTGGGTCAT	13	+	41691908-41691930:41701235-41701261	13q14.11c	Homo sapiens diacylglycerol kinase, eta (DGKH), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp761I1510; DGKeta	DKFZp761I1510; DGKeta
Homo sapiens	RefSeq	NM_002498.1	ILMN_18284	NEK3	NM_152720.1	NM_152720.1		4752	23510392	NM_152720.1	NEK3	NP_689933.1	ILMN_1695020	0001190504	A	1953	CAAGGGAGAAGGTATAGTGGAATGAGTGTGAGCATCGGGCTTTGCAGTCC	13	-	52707030-52707079	13q14.3d	Homo sapiens NIMA (never in mitosis gene a)-related kinase 3 (NEK3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7522034] [evidence NAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence NAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 7522034] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 7522034] [evidence NAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15618286] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HSPK36; MGC29949	HSPK36; MGC29949
Homo sapiens	RefSeq	NM_152720.1	ILMN_18284	NEK3	NM_152720.1	NM_152720.1		4752	23510392	NM_152720.1	NEK3	NP_689933.1	ILMN_2238795	0000110370	I	49	GAGCGGCTTTTCCAGGAGAAAGGGCCCTCACGGGTGAGCGGGGCGACTGG	13	-	52733412-52733461	13q14.3d	Homo sapiens NIMA (never in mitosis gene a)-related kinase 3 (NEK3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7522034] [evidence NAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence NAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 7522034] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 7522034] [evidence NAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15618286] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HSPK36; MGC29949	HSPK36; MGC29949
Homo sapiens	RefSeq	XM_928646.1	ILMN_173555	LOC284232	XR_018826.1	XR_018826.1		284232	113424288	XR_018826.1	LOC284232		ILMN_1677852	0004760500	S	176	ATTCTGAACTGTTGAAGGAAAAAGAAAGCAAGAAAAAACTGGAAGCTGAA				13q11c	PREDICTED: Homo sapiens similar to ankyrin repeat domain 20 family, member A2 (LOC284232), mRNA.					
Homo sapiens	RefSeq	NM_001031721.1	ILMN_27695	ZNF613	NM_024840.2	NM_024840.2		79898	21362002	NM_024840.2	ZNF613	NP_079116.2	ILMN_1671895	0000020670	A	2119	GTGCGTTCCAAGCAGAGAGCAAAGTAGCCATTGTGAGCCAGCCTGTTGCC	19	+	52448899-52448948	19q13.33e	Homo sapiens zinc finger protein 613 (ZNF613), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ13590	FLJ13590
Homo sapiens	RefSeq	NM_024840.2	ILMN_27695	ZNF613	NM_024840.2	NM_024840.2		79898	21362002	NM_024840.2	ZNF613	NP_079116.2	ILMN_1684032	0002350047	I	134	TCACTGCAGCCTCCATCTCCCGGGGCTCAGGTGATTTTCCCACCTCAGCT	19	+	52431175-52431224	19q13.33e	Homo sapiens zinc finger protein 613 (ZNF613), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ13590	FLJ13590
Homo sapiens	RefSeq	NM_138461.2	ILMN_23716	TM4SF19	NM_138461.2	NM_138461.2		116211	115511027	NM_138461.2	TM4SF19	NP_612470.2	ILMN_2413644	0003800706	A	783	GGTGTTTTCATCATCGGCTGTCTTGAATCCTTTCTACAAGGAGTGGGTAC	3	-	197535007-197535056	3q29f	Homo sapiens transmembrane 4 L six family member 19 (TM4SF19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			OCTM4	OCTM4
Homo sapiens	RefSeq	XM_001722117.1	ILMN_352604	LOC100130269	XM_001722117.1	XM_001722117.1		100130269	169215564	XM_001722117.1	LOC100130269	XP_001722169.1	ILMN_3273365	0007570441	M	549	GAAATACAAACTCCATCTGTGGCAGGCAGCATGAACCCCACTGCCCTGTG	22	+	31039626-31039675	22q12.3a	PREDICTED: Homo sapiens similar to Putative uncharacterized protein FLJ36925 (LOC100130269), mRNA.					
Homo sapiens	RefSeq	NM_023944.1	ILMN_28493	CYP4F12	NM_023944.2	NM_023944.2		66002	150036265	NM_023944.2	CYP4F12	NP_076433.2	ILMN_1809384	0006560239	S	1492	GATGAAAGTGGTCCTGGCGTTGATGCTGCTGCACTTCCGGTTCCTGCCAG	19	+	15668751-15668800	19p13.12a	Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 12 (CYP4F12), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	F22329_1	F22329_1
Homo sapiens	RefSeq	XR_039042.1	ILMN_344548	LOC100133372	XR_039042.1	XR_039042.1		100133372	169169218	XR_039042.1	LOC100133372		ILMN_3243291	0002340703	S	605	CACATATGCCACTGTGGAGGAGGTGGATGCAGCCGTGAATGCAAGGCCAC	6	+	32393831-32393880		PREDICTED: Homo sapiens misc_RNA (LOC100133372), miscRNA.					
Homo sapiens	RefSeq	NM_021641.2	ILMN_29338	ADAM12	NM_021641.2	NM_021641.2		8038	73747886	NM_021641.2	ADAM12	NP_067673.2	ILMN_1726266	0000520689	I	3207	CAGGTTTGAGGGTTTGCAGAAAGCCAGGGAACCCACAGAGTCACCAACCC	10	-	127720002-127720051	10q26.2a	Homo sapiens ADAM metallopeptidase domain 12 (meltrin alpha) (ADAM12), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7566181] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [pmid 7566181] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MLTN; MCMP; MLTNA; MCMPMltna	MLTN; MCMP; MLTNA; MCMPMltna
Homo sapiens	RefSeq	NM_032054.1	ILMN_16542	PCDHGA5	NM_032054.1	NM_032054.1		56110	14196470	NM_032054.1	PCDHGA5	NP_114443.1	ILMN_2305416	0003990070	A	2301	CCTGATCTTTCCCCAGCCCAACTACGCAGACACGCTCCTTAGTGAAGAGA	5	+	140726382-140726431	5q31.3c	Homo sapiens protocadherin gamma subfamily A, 5 (PCDHGA5), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-A5; MGC142020; ME3; CDH-GAMMA-A5	PCDH-GAMMA-A5; MGC142020; ME3; CDH-GAMMA-A5
Homo sapiens	RefSeq	XM_001721602.1	ILMN_343667	LOC100134226	XM_001721602.1	XM_001721602.1		100134226	169206353	XM_001721602.1	LOC100134226	XP_001721654.1	ILMN_3242612	0003440543	S	212	GCCGCTGTGGCAGGAACAGTGGAAGCTACCCGGCTTGTTGTGGCAGATCT					PREDICTED: Homo sapiens hypothetical protein LOC100134226 (LOC100134226), mRNA.					
Homo sapiens	RefSeq	NR_030233.1	ILMN_387932	MIR506	NR_030233.1	NR_030233.1		574511	262205522	NR_030233.1	MIR506		ILMN_3310246	0002070709	S	74	GCACCCTTCTGAGTAGAGTAATGTGCAACATGGACAACATTTGTGGTGGC				Xq27.3e	Homo sapiens microRNA 506 (MIR506), microRNA.					
Homo sapiens	RefSeq	XM_944081.1	ILMN_39837	LOC650195	XM_944081.1	XM_944081.1		650195	88970972	XM_944081.1	LOC650195	XP_949174.1	ILMN_1812299	0001430746	S	585	TAGAGGCAGGGGTCCAGAAGGGACCGGCCATATCTTTCTCAGGGCCTCCA					PREDICTED: Homo sapiens hypothetical protein LOC650195 (LOC650195), mRNA.					
Homo sapiens	RefSeq	XM_935883.1	ILMN_35464	LOC641820	XM_935883.1	XM_935883.1		641820	89027572	XM_935883.1	LOC641820	XP_940976.1	ILMN_1658022	0003890037	S	241	CGCAGAAAGGTGCTCAAGGCTGACCTGTCTCAGGGGGCGCACCCGGACCC					PREDICTED: Homo sapiens hypothetical protein LOC641820 (LOC641820), mRNA.					
Homo sapiens	RefSeq	NM_022823.1	ILMN_8274	FNDC4	NM_022823.1	NM_022823.1		64838	12383063	NM_022823.1	FNDC4	NP_073734.1	ILMN_1663032	0000150162	S	1307	CCCGGTCCAGGGGAGAGTCACTAGTTGTACCCTACTCCATTAGGTCCCAA	2	-	27568528-27568577	2p23.3a	Homo sapiens fibronectin type III domain containing 4 (FNDC4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ22362; FRCP1	FLJ22362; FRCP1
Homo sapiens	RefSeq	XM_942700.1	ILMN_46749	HIP1R	XM_942700.1	XM_942700.1		9026	89036389	XM_942700.1	HIP1R	XP_947793.1	ILMN_1787845	0002680592	I	499	GACAGGTTGCCCAGCTCCCAAGGGCTCACGTTCTTCCTCCTGCCCCTTTT				12q24.31d	PREDICTED: Homo sapiens huntingtin interacting protein-1-related, transcript variant 2 (HIP1R), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence NAS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes [goid 30136] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]		
Homo sapiens	RefSeq	NM_014500.3	ILMN_19667	HTATSF1	NM_014500.3	NM_014500.3		27336	34147671	NM_014500.3	HTATSF1	NP_055315.2	ILMN_2120575	0004920184	S	2210	GGAAGATGAAGATGCAGATGGAAAGGAAGTTGAAGATGCTGACGAAAAGT	X	+	135421607-135421656	Xq26.3b	Homo sapiens HIV-1 Tat specific factor 1 (HTATSF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10454543] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10454543] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 10454543] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10454543] [evidence TAS]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [pmid 10454543] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	dJ196E23.2; TAT-SF1	dJ196E23.2; TAT-SF1
Homo sapiens	RefSeq	NM_003789.2	ILMN_27933	TRADD	NM_003789.3	NM_003789.3		8717	115387096	NM_003789.3	TRADD	NP_003780.1	ILMN_1793831	0000020347	I	132	TTTGTGGAGTCCTCGCTGGACAAGGTGGTCCTGTCGGATGCCTACGCGCA	16	-	67190462-67190511	16q22.1a	Homo sapiens TNFRSF1A-associated via death domain (TRADD), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11684708] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7758105] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12887920] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 7758105] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7758105] [evidence TAS]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space [goid 19215] [pmid 11684708] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 7758105] [evidence IPI]	MGC11078; Hs.89862	MGC11078; Hs.89862
Homo sapiens	RefSeq	NM_152663.2	ILMN_17213	RALGPS2	NM_152663.2	NM_152663.2		55103	32441282	NM_152663.2	RALGPS2	NP_689876.2	ILMN_2276290	0006250630	I	2297	CTGCCATGAACCATGCTTCTTATCTCAGAACTGACCTGTGGAAACCCCTG	1	+	177152324-177152373	1q25.2b	Homo sapiens Ral GEF with PH domain and SH3 binding motif 2 (RALGPS2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	KIAA0351; FLJ10244; FLJ25604; dJ595C2.1	KIAA0351; FLJ10244; FLJ25604; dJ595C2.1
Homo sapiens	RefSeq	NM_018037.1	ILMN_17213	RALGPS2	NM_152663.2	NM_152663.2		55103	32441282	NM_152663.2	RALGPS2	NP_689876.2	ILMN_1813703	0000130646	A	757	CACTTATGGCAGTGGTTTCTGGCCTACAGAGTGCCCCAATTTTCAGGTTG	1	+	177057401-177057450	1q25.2b	Homo sapiens Ral GEF with PH domain and SH3 binding motif 2 (RALGPS2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	KIAA0351; FLJ10244; FLJ25604; dJ595C2.1	KIAA0351; FLJ10244; FLJ25604; dJ595C2.1
Homo sapiens	RefSeq	NM_015127.2	ILMN_19789	CLCC1	NM_015127.2	NM_015127.2		23155	34147325	NM_015127.2	CLCC1	NP_055942.1	ILMN_1809267	0003440601	S	1532	CAGACCAAGGCAGCACATACAGCCCCGCAAGAGGTGTGGCTGGACCACGT	1	-	109278847-109278896	1p13.3c-p13.3b	Homo sapiens chloride channel CLIC-like 1 (CLCC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP11-475E11.6; KIAA0761; MCLC	RP11-475E11.6; KIAA0761; MCLC
Homo sapiens	RefSeq	NM_175862.2	ILMN_23756	CD86	NM_175862.2	NM_175862.2		942	29029571	NM_175862.2	CD86	NP_787058.2	ILMN_1782560	0004040022	I	36	GCTGCTGTAACAGGGACTAGCACAGACACACGGATGAGTGGGGTCATTTC	3	+	123256946-123256995	3q13.33c	Homo sapiens CD86 antigen (CD28 antigen ligand 2, B7-2 antigen) (CD86), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7513726] [evidence NAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9915850] [evidence IC ]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7694363] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9915850] [evidence IC ]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 7513726] [evidence TAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 9915850] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the cytokine lymphotoxin A [goid 43017] [pmid 9915850] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [pmid 9915850] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-4 [goid 45404] [pmid 9915850] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation [goid 45630] [pmid 9915850] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 9915850] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9915850] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 9915850] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9915850] [evidence NAS]	B7-2; B70; LAB72; MGC34413; CD28LG2	B7-2; LAB72; B70; MGC34413; CD28LG2
Homo sapiens	RefSeq	XM_001724189.1	ILMN_344294	LOC732432	XM_001724189.1	XM_001724189.1		732432	169218256	XM_001724189.1	LOC732432	XP_001724241.1	ILMN_3243055	0006590010	S	181	GTTTATTCCTACACTCTACCACTTTCCTGCCAATTGTGATGCCTGTGCCA					PREDICTED: Homo sapiens similar to Rho-associated, coiled-coil containing protein kinase p160ROCK (LOC732432), mRNA.					
Homo sapiens	RefSeq	XR_017064.2	ILMN_165842	LOC644214	XR_017064.2	XR_017064.2		644214	169162744	XR_017064.2	LOC644214		ILMN_3209117	0002710088	A	334	GTCAACATCACACTGCGCATCCTCTTCTGGGCCGTTGCTAGCCAGTTTCT	1	-	222111401-222111450	1q42.11a	PREDICTED: Homo sapiens misc_RNA (LOC644214), miscRNA.					
Homo sapiens	RefSeq	NM_053051.1	ILMN_22489	CNTROB	NM_053051.1	NM_053051.1		116840	29789292	NM_053051.1	CNTROB	NP_444279.1	ILMN_1702044	0004560482	S	3404	AACACAGACTCCCGCTTGGGTGAGATCCCCCGGAAAGAGATTCCCTCCCA	17	+	7793157-7793200:7793428-7793433	17p13.1d	Homo sapiens centrobin, centrosomal BRCA2 interacting protein (CNTROB), transcript variant 1, mRNA.	A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [pmid 16275750] [evidence IDA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 16275750] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cell cycle process whereby a daughter centriole is formed perpendicular to an existing centriole. An immature centriole contains a ninefold radially symmetric array of single microtubules; mature centrioles consist of a radial array of nine microtubule triplets, doublets, or singlets depending upon the species and cell type [goid 7099] [pmid 16275750] [evidence IMP]; The process by which duplicated centrosome components move away from each other. The centriole pair within each centrosome becomes part of a separate microtubule organizing center that nucleates a radial array of microtubules called an aster. The two asters move to opposite sides of the nucleus to form the two poles of the mitotic spindle [goid 51299] [pmid 16275750] [evidence IMP]	Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]	PP1221; LIP8	PP1221; LIP8
Homo sapiens	RefSeq	XM_941710.1	ILMN_39018	LOC652292	XM_941710.1	XM_941710.1		652292	89070854	XM_941710.1	LOC652292	XP_946803.1	ILMN_1797715	0000450014	S	260	CTGTGACAATTTTGCCCAAACGAGCATCAATTGATGGTAAGAATGCACCG					PREDICTED: Homo sapiens similar to glutamate receptor, metabotropic 8 (LOC652292), mRNA.					
Homo sapiens	RefSeq	NM_054114.3	ILMN_179851	TAGAP	NM_054114.3	NM_054114.3		117289	23199969	NM_054114.3	TAGAP	NP_473455.2	ILMN_2333774	0005360364	A	1030	TGGCCATCTGCATTGGACCCAACATGCTCACCCTGGAGAATGACCAGAGC	6	-	159460181-159460230	6q25.3e	Homo sapiens T-cell activation RhoGTPase activating protein (TAGAP), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	FKSG15; MGC27381; FLJ39771; TAGAP1; FLJ32631; MGC133247	FKSG15; MGC27381; FLJ39771; TAGAP1; FLJ32631; MGC133247
Homo sapiens	RefSeq	XM_943346.1	ILMN_32731	LOC647281	XM_943346.2	XM_943346.2		647281	113424408	XM_943346.2	LOC647281	XP_948439.1	ILMN_1692499	0001400255	S	214	AGTCCAAGGAGGGCCGCAGATCAGGCTGAAGAAGGATGGATCCACATGCT				13q22.1a	PREDICTED: Homo sapiens hypothetical LOC647281, transcript variant 2 (LOC647281), mRNA.					
Homo sapiens	RefSeq	NM_004736.2	ILMN_7342	XPR1	NM_004736.2	NM_004736.2		9213	19923271	NM_004736.2	XPR1	NP_004727.2	ILMN_2104106	0004010075	S	4202	CTTTGTGCTTCTATTGCTTTTTTGTGTTTTGTTAAGCATGTCCCTTGGCC	1	+	179121771-179121820	1q25.3a	Homo sapiens xenotropic and polytropic retrovirus receptor (XPR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9927670] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9927670] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9990033] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 9990033] [evidence TAS]	FLJ90308; SYG1; X3	FLJ90308; SYG1; X3
Homo sapiens	RefSeq	NM_004736.2	ILMN_7342	XPR1	NM_004736.2	NM_004736.2		9213	19923271	NM_004736.2	XPR1	NP_004727.2	ILMN_1798030	0005290246	S	3992	CACTTCCACCATGTATTACAAGTCTTGACCCATCCCTGTCGTAACTCCAG	1	+	179121561-179121610	1q25.3a	Homo sapiens xenotropic and polytropic retrovirus receptor (XPR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9927670] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9927670] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9990033] [evidence TAS]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 9990033] [evidence TAS]	FLJ90308; SYG1; X3	FLJ90308; SYG1; X3
Homo sapiens	RefSeq	XM_371311.4	ILMN_41625	FLJ36032	XM_371311.5	XM_371311.5		284485	113411441	XM_371311.5	FLJ36032	XP_371311.3	ILMN_1672818	0003120044	S	61	TGCACTGGGCCCACTCAGAGCACGCCCTCAGTGCAGGGATTATCTGTGGA	1	+	149956991-149957040	1q21.3a	PREDICTED: Homo sapiens hypothetical protein FLJ36032 (FLJ36032), mRNA.					
Homo sapiens	RefSeq	NM_014566.1	ILMN_18080	OR1D5	NM_014566.1	NM_014566.1		8386	7657422	NM_014566.1	OR1D5	NP_055381.1	ILMN_3235772	0006100546	S	867	CAGGCTGAGGAACAAAGACATGCATGGGGCTCCGGGAAGAGTCCTATGGA	17	-	2965985-2966034	17p13.3b	Homo sapiens olfactory receptor, family 1, subfamily D, member 5 (OR1D5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 1315913] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 1315913] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 1315913] [evidence TAS]	OR17-30; OR17-31; OR17-2	OR17-30; OR17-31; OR17-2
Homo sapiens	RefSeq	NM_031219.2	ILMN_14769	HDHD3	NM_031219.2	NM_031219.2		81932	31377665	NM_031219.2	HDHD3	NP_112496.1	ILMN_1726466	0003190338	S	1626	AGCTCTGGACCTTTCCCCCTCTCCCTGCGGCCTTTGTCACCTACTGTGAT	9	-	116135743-116135792	9q32c	Homo sapiens haloacid dehalogenase-like hydrolase domain containing 3 (HDHD3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate [goid 8967] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	C9orf158; MGC12904; 2810435D12Rik	C9orf158; MGC12904; 2810435D12Rik
Homo sapiens	RefSeq	NM_198845.2	ILMN_37509	SIGLEC6	NM_198845.2	NM_198845.2		946	87298829	NM_198845.2	SIGLEC6	NP_942142.2	ILMN_2299095	0001410070	A	1640	CAGGGTTGGTCCCTTCTAAGGCCTCTCTTGTTGGCTTGTAGATGGCTGTC	19	-	56714934-56714983	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 6 (SIGLEC6), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9465907] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9465907] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9465907] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CD33L1; CD327; SIGLEC-6; OBBP1; CD33L; CDw327	CD33L1; CD327; SIGLEC-6; OBBP1; CD33L; CDw327
Homo sapiens	RefSeq	NM_004753.4	ILMN_12432	DHRS3	NM_004753.4	NM_004753.4		9249	62988332	NM_004753.4	DHRS3	NP_004744.2	ILMN_1752478	0007040670	S	1562	TGACCCCCACAGGGAGGCAGGAAAACAGCCAGAAGCCACCTTGACACTTT	1	-	12628133-12628182	1p36.22a-p36.21d	Homo sapiens dehydrogenase/reductase (SDR family) member 3 (DHRS3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9705317] [evidence TAS]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [pmid 9705317] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 9705317] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9705317] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	retSDR1; SDR1; Rsdr1; RDH17	retSDR1; SDR1; Rsdr1; RDH17
Homo sapiens	RefSeq	NM_145651.1	ILMN_18092	SCGB1C1	NM_145651.2	NM_145651.2		147199	153252156	NM_145651.2	SCGB1C1	NP_663626.2	ILMN_1768099	0006180609	S	344	CACACAAGCAGCCGTGGACACAACGCCCACTACCACCTCCCACATGGAAA	11	+	184486-184535	11p15.5d	Homo sapiens secretoglobin, family 1C, member 1 (SCGB1C1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]	RYD5	RYD5
Homo sapiens	RefSeq	NM_022900.3	ILMN_1012	CASD1	NM_022900.3	NM_022900.3		64921	40255036	NM_022900.3	CASD1	NP_075051.3	ILMN_2139035	0006020520	S	2350	GCCAGTATCACATATGGCTGGCAGCGGACACAAGGGGTATCTTGGTACTG	7	+	94022749-94022798	7q21.3b	Homo sapiens CAS1 domain containing 1 (CASD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ21879; C7orf12; NBLA04196; FLJ41901; FLJ21213	FLJ21213; FLJ21879; C7orf12; NBLA04196; FLJ41901
Homo sapiens	RefSeq	NM_152763.3	ILMN_2514	AKNAD1	NM_152763.3	NM_152763.3		254268	91754184	NM_152763.3	AKNAD1	NP_689976.2	ILMN_2205785	0003130605	S	2748	GCACAGAGGTGGAGGAATCGACTGAAATACTAGTTCAACGCTAGGCTACC	1	-	109358775-109358792:109358793-109358824	1p13.3c	Homo sapiens AKNA domain containing 1 (AKNAD1), mRNA.				RP11-475E11.3; MGC26989	RP11-475E11.3; MGC26989
Homo sapiens	RefSeq	NM_001005354.1	ILMN_21340	PRR13	NM_001005354.2	NM_001005354.2		54458	133778979	NM_001005354.2	PRR13	NP_001005354.1	ILMN_1795944	0006960471	A	152	GACACACCTAAACATGTGGAATCCCAATGCCGGTGGGCCCCCTCATCCTG	12	+	52122753-52122765:52122766-52122784:52123592-52123609	12q13.13e	Homo sapiens proline rich 13 (PRR13), transcript variant 3, mRNA.				FLJ23818; DKFZp564J157; TXR1	FLJ23818; DKFZp564J157; TXR1
Homo sapiens	RefSeq	NR_030642.1	ILMN_388227	MIR944	NR_030642.1	NR_030642.1		100126340	262206271	NR_030642.1	MIR944		ILMN_3308587	0003060189	S	38	AAATTGTATAAAGAGAAATTATTGTACATCGGATGAGCTGTGTCTGGGAT				3q28b	Homo sapiens microRNA 944 (MIR944), microRNA.					
Homo sapiens	RefSeq	NM_006574.2	ILMN_5478	CSPG5	NM_006574.3	NM_006574.3		10675	139394620	NM_006574.3	CSPG5	NP_006565.2	ILMN_1688184	0000160397	S	1723	CGCCCAAACTTGAGGGTGGCAAAGGTGACCAGGCTGACTTGGATGTGAAC	3	-	47604113-47604162	3p21.31g	Homo sapiens chondroitin sulfate proteoglycan 5 (neuroglycan C) (CSPG5), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9950058] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12885772] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9950058] [evidence TAS]; The lipid bilayer surrounding a vesicle associated with the Golgi apparatus [goid 30660] [pmid 12885772] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12885772] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [pmid 12885772] [evidence TAS]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12885772] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12885772] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 12885772] [evidence TAS]	NGC; MGC44034	NGC; MGC44034
Homo sapiens	RefSeq	NM_004640.4	ILMN_15410	BAT1	NM_004640.5	NM_004640.5		7919	93588182	NM_004640.5	BAT1	NP_004631.1	ILMN_1690576	0002030546	I	558	TCACCCCTTGTTTTCACCTATTTTGCGAGAACCCATCCAGATCCCCCTTC	6	-	31616312-31616361	6p21.33a	Homo sapiens HLA-B associated transcript 1 (BAT1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7601445] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 15047853] [evidence IGI]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 15047853] [evidence IGI]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 7601445] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14667819] [evidence IPI]	UAP56; DDX39B; D6S81E	D6S81E
Homo sapiens	RefSeq	XM_931780.1	ILMN_45519	LOC643757	XM_931780.1	XM_931780.1		643757	89059560	XM_931780.1	LOC643757	XP_936873.1	ILMN_1734031	0006620400	S	96	GGGCCGGCGCTCCCCTCCTACCCTCCCCGCGACCCCCGTCTGGCCCCCAC	X	+	48798141-48798190		PREDICTED: Homo sapiens hypothetical protein LOC643757 (LOC643757), mRNA.					
Homo sapiens	RefSeq	XM_943891.1	ILMN_139165	PARP8	XM_943891.1	XM_943891.1		79668	88987739	XM_943891.1	PARP8	XP_948984.1	ILMN_1810299	0005260327	I	3	TGGCAAAGCACTGGATAAAACCTGAAGGGTAGTAACTATCTTATGTGTAT				5q11.1d	PREDICTED: Homo sapiens poly (ADP-ribose) polymerase family, member 8, transcript variant 5 (PARP8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Homo sapiens	RefSeq	NM_175060.1	ILMN_16895	CLEC14A	NM_175060.1	NM_175060.1		161198	28269706	NM_175060.1	CLEC14A	NP_778230.1	ILMN_2142185	0003310747	S	2000	AGTGGAAGTGCCTTTAGGATGGTGATACTGGGGGACCGGGTAGTGCTGGG	14	-	38723525-38723574	14q21.1a	Homo sapiens C-type lectin domain family 14, member A (CLEC14A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	C14orf27; CEG1	C14orf27; CEG1
Homo sapiens	RefSeq	NM_001103176.1	ILMN_340133	CNPY1	NM_001103176.1	NM_001103176.1		285888	157042799	NM_001103176.1	CNPY1	NP_001096646.1	ILMN_3246547	0001440678	S	1972	TTCCTGAAAACCTAGTGACCTTCACAGGAACATGGCGGGACCTGTGACAC	7	-	155294165-155294214	7q36.3a	Homo sapiens canopy 1 homolog (zebrafish) (CNPY1), mRNA.				MGC125606	MGC125606
Homo sapiens	RefSeq	XM_930560.1	ILMN_174488	LOC400721	XR_018616.1	XR_018616.1		400721	113428758	XR_018616.1	LOC400721		ILMN_1700182	0000830326	S	5744	AAGGTCATGCCACTGCACTCCAGCCTGGCTGACAGTGAGACTCTGTCTCA					PREDICTED: Homo sapiens similar to Zinc finger protein 418 (LOC400721), mRNA.					
Homo sapiens	RefSeq	NM_152316.1	ILMN_2540	C11ORF46	NM_152316.1	NM_152316.1		120534	22748692	NM_152316.1	C11orf46	NP_689529.1	ILMN_1767642	0003840736	S	1451	CCAGTGGTTTGTCCCTGTGCATCTGTTAATTCAGTTCACGTACAGCAGAG	11	+	30315422-30315471	11p14.1a	Homo sapiens chromosome 11 open reading frame 46 (C11orf46), mRNA.				dJ299F11.1; FLJ38968	dJ299F11.1; FLJ38968
Homo sapiens	RefSeq	XR_038464.1	ILMN_341085	LOC100132535	XR_038464.1	XR_038464.1		100132535	169178362	XR_038464.1	LOC100132535		ILMN_3283032	0005670142	M	54	AGGAGGTTGTTGGCAGGGACTGCAGATCCTGTCAGACCTGGCCACCACCT				9q34.11b	PREDICTED: Homo sapiens misc_RNA (LOC100132535), miscRNA.					
Homo sapiens	RefSeq	NM_022558.2	ILMN_22062	GH2	NM_022558.2	NM_022558.2		2689	20809255	NM_022558.2	GH2	NP_072052.1	ILMN_1659354	0003830221	A	414	CTCCTCAGGAGCGTCTTCGCCAACAGCCTGGTGTATGGCGCCTCGGACAG	17	-	61958186-61958235	17q23.3b	Homo sapiens growth hormone 2 (GH2), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 8943276] [evidence TAS]	GHV; GH-V; hGH-V; GHL	GHV; GH-V; hGH-V; GHL
Homo sapiens	RefSeq	XM_931849.1	ILMN_38758	LOC643841	XM_931849.1	XM_931849.1		643841	89035397	XM_931849.1	LOC643841	XP_936942.1	ILMN_1742008	0006330075	S	827	GAGGTAGGACAGCTGGCTGATGGGGCAAGGCTTCTTGAAGACATGGCAGC	12	+	8239806-8239855		PREDICTED: Homo sapiens hypothetical protein LOC643841 (LOC643841), mRNA.					
Homo sapiens	RefSeq	NM_194279.1	ILMN_8677	ISCA2	NM_194279.1	NM_194279.1		122961	34996486	NM_194279.1	ISCA2	NP_919255.1	ILMN_2136635	0001580397	S	854	GTTGTGGATCAGGGTCACAGATTGGGTAGCTTGGACACCAGTTATTAGAG	14	+	74031835-74031884	14q24.3a	Homo sapiens iron-sulfur cluster assembly 2 homolog (S. cerevisiae) (ISCA2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	HBLD1; ISA2; c14_5557	HBLD1; ISA2; c14_5557
Homo sapiens	Unigene	Hs.371789	ILMN_88202	HS.371789	Hs.371789		Hs.371789		4983826	AI695926			ILMN_1902094	0004180372	S	196	GGCTGGGGAAGGAGCGGTGTCGTGAATTATTTGTGAGGTGTTCAGACGAG	7	-	1470501-1470550		ts87f05.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2238273 3, mRNA sequence					
Homo sapiens	Unigene	Hs.545893	ILMN_108997	HS.545893	Hs.545893		Hs.545893		3109055	AA947802			ILMN_1895006	0002810086	S	199	CATGAACCCTGTGGGCATAAGTGGCAGGGAAGAATTTGAACAGTCTATTG	9	-	3620877-3620926		od87e10.s1 NCI_CGAP_Ov2 Homo sapiens cDNA clone IMAGE:1374954, mRNA sequence					
Homo sapiens	Unigene	Hs.571536	ILMN_123717	HS.571536	Hs.571536		Hs.571536		78241155	DA189000			ILMN_1849966	0000070632	S	290	AGCCCTAGACCAGCGTTTTTCAAAGTGTGGTTCCCAGACCAGCAGCGGCG	8	+	139010220-139010269		DA189000 BRAMY3 Homo sapiens cDNA clone BRAMY3010565 5, mRNA sequence					
Homo sapiens	RefSeq	XM_373904.4	ILMN_40844	LOC388780	XM_373904.4	XM_373904.4		388780	89057785	XM_373904.4	LOC388780	XP_373904.4	ILMN_1659737	0007550088	S	181	CAGAGGACAAAATCTCTACACCACTGCTTCAGAGCTAGGGGTAAAGACAG	20	+	2108042-2108047:2117765-2117808	20p13d	PREDICTED: Homo sapiens hypothetical LOC388780 (LOC388780), mRNA.					
Homo sapiens	RefSeq	NM_130776.1	ILMN_21317	XAGE3	NM_130776.1	NM_130776.1		170626	19747268	NM_130776.1	XAGE3	NP_570132.1	ILMN_1782271	0006960564	I	2	AGCATTCAGAAGGCACACATACTTACACTTGCCCTGAGACTTAGTTCGAA	X	-	52913006-52913055	Xp11.22b	Homo sapiens X antigen family, member 3 (XAGE3), transcript variant 2, mRNA.				XAGE-3; PLAC6; GAGED4; pp9012; MGC71925	XAGE-3; PLAC6; GAGED4; pp9012; MGC71925
Homo sapiens	RefSeq	XM_001725566.1	ILMN_348893	LOC100129058	XM_001725566.1	XM_001725566.1		100129058	169165033	XM_001725566.1	LOC100129058	XP_001725618.1	ILMN_3269108	0007550543	M	5	CCAAGACAACCCCTGCTGATTCCTCACAGCTGACTTGTGACATGCCTAGT	3	+	51882656-51882705	3p21.1e	PREDICTED: Homo sapiens similar to hCG2038656 (LOC100129058), mRNA.					
Homo sapiens	RefSeq	XM_927656.1	ILMN_38125	LOC644528	XM_927656.1	XM_927656.1		644528	89060478	XM_927656.1	LOC644528	XP_932749.1	ILMN_1741380	0001580039	S	52	TGCAGTAGTTCATCAGGGGCCGTACATGCTTGTGCCGTGAGCGACGGCCA	X	-	36532-36581		PREDICTED: Homo sapiens hypothetical LOC644528 (LOC644528), mRNA.					
Homo sapiens	RefSeq	NM_138707.1	ILMN_13908	BCL7B	NM_138707.1	NM_138707.1		9275	20336474	NM_138707.1	BCL7B	NP_619713.1	ILMN_2367275	0006370593	A	977	GGTTCTGACAACAGTACCCATCCCCCACAGTACCCCTTCAGCTCAGTTTC	7	-	72588782-72588831	7q11.23a-q11.23b	Homo sapiens B-cell CLL/lymphoma 7B (BCL7B), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8605326] [evidence NAS]		
Homo sapiens	RefSeq	NM_001039182.1	ILMN_15672	BOLA2B	NM_001039182.1	NM_001039182.1		654483	85797672	NM_001039182.1	BOLA2B	NP_001034271.1	ILMN_3249676	0004150762	S	241	AACCACAGCAGGGGGTTGATTGCCGTGACCTAGGGTCCAGGGGAGGGCTG	16	-	30205337-30205386	16p11.2d	Homo sapiens bolA homolog 2B (E. coli) (BOLA2B), mRNA.					
Homo sapiens	Unigene	Hs.565374	ILMN_117857	HS.565374	Hs.565374		Hs.565374		21479190	BQ575873			ILMN_1818935	0004010273	S	361	GCCAGGTTTCATGGCATCCAATGTATAGGGCCTCTGCTCCAGCCAGACAC	2	+	183472753-183472802		UI-H-EZ1-bbh-c-16-0-UI.s1 NCI_CGAP_Ch2 Homo sapiens cDNA clone UI-H-EZ1-bbh-c-16-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_018918.2	ILMN_25177	PCDHGA5	NM_018918.2	NM_018918.2		56110	14196469	NM_018918.2	PCDHGA5	NP_061741.1	ILMN_2251961	0004610546	I	2542	CAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCAC	5	+	140744018-140744067	5q31.3c	Homo sapiens protocadherin gamma subfamily A, 5 (PCDHGA5), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-A5; MGC142020; ME3; CDH-GAMMA-A5	PCDH-GAMMA-A5; MGC142020; ME3; CDH-GAMMA-A5
Homo sapiens	RefSeq	NM_018918.2	ILMN_25177	PCDHGA5	NM_018918.2	NM_018918.2		56110	14196469	NM_018918.2	PCDHGA5	NP_061741.1	ILMN_2251963	0005310671	I	2662	CCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGAC	5	+	140744138-140744187	5q31.3c	Homo sapiens protocadherin gamma subfamily A, 5 (PCDHGA5), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-A5; MGC142020; ME3; CDH-GAMMA-A5	PCDH-GAMMA-A5; MGC142020; ME3; CDH-GAMMA-A5
Homo sapiens	RefSeq	NM_002427.2	ILMN_18653	MMP13	NM_002427.2	NM_002427.2		4322	13027796	NM_002427.2	MMP13	NP_002418.1	ILMN_1663873	0000650092	S	1946	GCACTGAGGATATTCAGATGTATGTGCCCTTCTTCACACAGACACTAACG	11	-	102814443-102814492	11q22.2b	Homo sapiens matrix metallopeptidase 13 (collagenase 3) (MMP13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8207000] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8207000] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 8609233] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8207000] [evidence TAS]	CLG3	CLG3
Homo sapiens	RefSeq	XM_001721375.1	ILMN_337386	LOC100129878	XM_001721375.1	XM_001721375.1		100129878	169212789	XM_001721375.1	LOC100129878	XP_001721427.1	ILMN_3179309	0005670689	A	118	GTGTATGGGTAACGGGAATGGCAGGACTGTGGTTGAGCTTTGGGAGCCCG	18	+	44804670-44804677:44806405-44806446	18q21.1e	PREDICTED: Homo sapiens hypothetical protein LOC100129878 (LOC100129878), mRNA.					
Homo sapiens	RefSeq	XM_001721375.1	ILMN_337386	LOC100129878	XM_001721375.1	XM_001721375.1		100129878	169212789	XM_001721375.1	LOC100129878	XP_001721427.1	ILMN_3255770	0004830703	M	491	AGAAAACCTCACACGGACTCAGGGAGAAGAGAGGGGCTAGGTGGGTGTGC	18	+	44828674-44828723	18q21.1e	PREDICTED: Homo sapiens hypothetical protein LOC100129878 (LOC100129878), mRNA.					
Homo sapiens	RefSeq	NM_181869.1	ILMN_29517	APAF1	NM_013229.2	NM_013229.2		317	32483365	NM_013229.2	APAF1	NP_037361.1	ILMN_1659463	0001820324	A	6863	TGATGGAGCTGCAAATTTCATGGCAGTTCATGCAGTCGGTCAAGAGGAGG	12	+	97653047-97653096	12q23.1c	Homo sapiens apoptotic peptidase activating factor 1 (APAF1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9267021] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9267021] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9922454] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9390557] [evidence EXP]	The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9753320] [evidence TAS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [pmid 9267021] [evidence IDA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 10441496] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 10383829] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [pmid 15009102] [evidence NAS];  [goid 16505] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	CED4; DKFZp781B1145	CED4; DKFZp781B1145
Homo sapiens	RefSeq	XM_001726954.1	ILMN_347511	GAPDHL6	XM_001726954.1	XM_001726954.1		729403	169208087	XM_001726954.1	GAPDHL6	XP_001727006.1	ILMN_3267451	0005270541	M	848	TCGACTTCAACAGCAACACCCACTCTTCTACCTTCGATGCTGGGGCAGCC	15	-	62608026-62608075	15q22.31a	PREDICTED: Homo sapiens glyceraldehyde-3-phosphate dehydrogenase-like 6 (GAPDHL6), mRNA.					
Homo sapiens	RefSeq	NM_005817.3	ILMN_180330	M6PRBP1	NM_005817.3	NM_005817.3		10226	51317356	NM_005817.3	M6PRBP1	NP_005808.2	ILMN_1660021	0000620008	S	2026	TTGTTTACACCGATGTCCCTGAATATCAGCCTGTAGCTAATGGACTTGGG	19	-	4789506-4789555	19p13.3d	Homo sapiens mannose-6-phosphate receptor binding protein 1 (M6PRBP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9590177] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 9590177] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9590177] [evidence TAS]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The single layer of phopholipids surrounding a lipid storage body [goid 34430] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 9590177] [evidence TAS]		MGC2012; TIP47; PP17; MGC11117	MGC2012; TIP47; PP17; MGC11117
Homo sapiens	RefSeq	NM_016582.1	ILMN_23901	SLC15A3	NM_016582.1	NM_016582.1		51296	7706116	NM_016582.1	SLC15A3	NP_057666.1	ILMN_2085862	0004220044	S	1981	ACAGGCCCTATTCCAGCCCCCTTGCTTCACTCTACCGGACAGACGGCAGC	11	-	60461216-60461265	11q12.2a	Homo sapiens solute carrier family 15, member 3 (SLC15A3), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	PTR3; OCTP; hPTR3; PHT2; FLJ26631	PTR3; OCTP; hPTR3; PHT2; FLJ26631
Homo sapiens	RefSeq	NM_000944.2	ILMN_24591	PPP3CA	NM_000944.3	NM_000944.3		5530	142369518	NM_000944.3	PPP3CA	NP_000935.1	ILMN_1670970	0002940537	S	3617	CTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCCACTGT	4	-	102164344-102164393	4q23c	Homo sapiens protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform (PPP3CA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A heterodimeric calcium ion and calmodulin dependent protein phosphatase composed of catalytic and regulatory subunits; the regulatory subunit is very similar in sequence to calmodulin [goid 5955] [pmid 8392375] [evidence NAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 8392375] [evidence NAS]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibres are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast [goid 48741] [evidence IEA]; Any process that modulates the frequency or rate of synaptic transmission, the process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 50804] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8392375] [evidence NAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8392375] [evidence NAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 8392375] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CALN; CALNA; CCN1; PPP2B; CNA1; CALNA1	CALN; CALNA; CCN1; PPP2B; CNA1; CALNA1
Homo sapiens	RefSeq	XR_037471.1	ILMN_347189	LOC387770	XR_037471.1	XR_037471.1		387770	169202783	XR_037471.1	LOC387770		ILMN_3289793	0001410494	M	68	TCTCCAGTGTGGAGGCGAGTCTGTTGTGGGTGAAACAGAAGCCCCTGGGG				11p11.12c	PREDICTED: Homo sapiens misc_RNA (LOC387770), miscRNA.					
Homo sapiens	RefSeq	NM_000267.1	ILMN_173677	NF1	NM_001042492.1	NM_001042492.1		4763	109826563	NM_001042492.1	NF1	NP_001035957.1	ILMN_1726387	0006940682	S	8679	GACCTCACTTGCAACTTCCCAGCATTCCCCAGGAATCGACAAGGAGAACG	17	+	26711816-26711847:26725157-26725174	17q11.2c-q11.2d	Homo sapiens neurofibromin 1 (NF1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1550670] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1550670] [evidence ISS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [pmid 1550670] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 1550670] [evidence IDA]	The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence ISS]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence ISS]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence ISS]; Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [pmid 17404841] [evidence IMP]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence ISS]; A series of reactions, mediated by the intracellular phosphoinositide 3-kinase (PI3K). PI3K cascades lie downstream of many cell surface receptor linked signaling pathways and regulate numerous cellular functions [goid 14065] [evidence ISS]; The process whose specific outcome is the progression of the spinal cord over time, from its formation to the mature structure. The spinal cord primarily conducts sensory and motor nerve impulses between the brain and the peripheral nervous tissues [goid 21510] [evidence ISS]; The process aimed at the progression of an astrocyte that resides in the forebrain, from initial commitment of the cell to its fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function [goid 21897] [evidence ISS]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence ISS]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22011] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence ISS]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [pmid 16648142] [evidence IMP]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence ISS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus [goid 42992] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence ISS]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence ISS]; Any process that modulates the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43535] [pmid 17404841] [evidence IMP]; Any process that modulates the frequency, rate or extent of bone tissue loss (resorption) [goid 45124] [evidence ISS]; Any process that modulates the frequency, rate or extent of glia cell differentiation [goid 45685] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity [goid 45762] [evidence ISS]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [pmid 17404841] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence ISS]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte differentiation [goid 48715] [evidence ISS]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence ISS]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence ISS]; The process by which the anatomical structures of the forebrain are generated and organized. Morphogenesis pertains to the creation of form. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 48853] [evidence ISS]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [pmid 17299016] [evidence IMP]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Ras superfamily [goid 5099] [pmid 1570015] [evidence IDA]; Increases the rate of GTP hydrolysis by a GTPase of the Ras superfamily [goid 5099] [pmid 1568247] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11356864] [evidence IPI]	VRNF; DKFZp686J1293; NFNS; WSS	VRNF; DKFZp686J1293; NFNS; WSS
Homo sapiens	RefSeq	NM_001013664.1	ILMN_16315	LOC392395	NM_001013664.1	NM_001013664.1		392395	61966774	NM_001013664.1	LOC392395	NP_001013686.1	ILMN_1662506	0001710201	S	2128	GCGCTCGTCATCCGAAAGAACCCTGAGAGGCATCCAAGACAGGCCCAACT				9q34.11e	Homo sapiens similar to hemicentin (LOC392395), mRNA.					
Homo sapiens	RefSeq	NM_020860.2	ILMN_163269	STIM2	NM_020860.2	NM_020860.2		57620	132626570	NM_020860.2	STIM2	NP_065911.2	ILMN_3307858	0006220719	S	3560	CCTTAAGCCGAGGTGGGGGGATATGGGGATTCAGGCAATTGTTTACACAC	4	+	26634558-26634607	4p15.2b	Homo sapiens stromal interaction molecule 2 (STIM2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 16860747] [evidence NAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel [goid 32235] [pmid 16860747] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11463338] [evidence IPI]	KIAA1482; FLJ39527	KIAA1482; FLJ39527
Homo sapiens	RefSeq	NM_000838.2	ILMN_180585	GRM1	NM_000838.2	NM_000838.2		2911	6006005	NM_000838.2	GRM1	NP_000829.1	ILMN_1670547	0000010131	S	6470	CCCTATACCAAGAGGGCCGAAACTCTTCACCTTGATGTATGTTCTGATAC	6	+	146800275-146800324	6q24.3a	Homo sapiens glutamate receptor, metabotropic 1 (GRM1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7476890] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7476890] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9076744] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGLUR1A; mGlu1; GPRC1A; GRM1A; MGLUR1	MGLUR1A; mGlu1; GPRC1A; GRM1A; MGLUR1
Homo sapiens	RefSeq	NM_031935.1	ILMN_170646	HMCN1	NM_031935.2	NM_031935.2		83872	118572605	NM_031935.2	HMCN1	NP_114141.2	ILMN_1677308	0002900471	S	18009	CACGTCAATACACTGTACATGGTGGTAATAGACTCTAAGCAATTGCCAAG	1	+	184426505-184426554	1q25.3g-q31.1a	Homo sapiens hemicentin 1 (HMCN1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The production of light by certain enzyme-catalyzed reactions in cells [goid 8218] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AXPC1; ARMD1; FIBL6; FBLN6; FIBL-6	GS1-174L6.1; FIBL6; FBLN6; FIBL-6
Homo sapiens	RefSeq	XM_001719540.1	ILMN_340865	LOC100132159	XM_001719540.1	XM_001719540.1		100132159	169191005	XM_001719540.1	LOC100132159	XP_001719592.1	ILMN_3206290	0005900301	A	687	CGCAGTGTTCACCCCCAGCTTTCTATTACAGCCACCACCCAGGGACTCTG	10	-	5547817-5547866	10p15.1b	PREDICTED: Homo sapiens hypothetical protein LOC100132159 (LOC100132159), mRNA.					
Homo sapiens	RefSeq	XM_927689.1	ILMN_39491	LOC644574	XM_927689.1	XM_927689.1		644574	89035420	XM_927689.1	LOC644574	XP_932782.1	ILMN_1769231	0006840463	S	1652	TGAGCAGTGGGGGAGGTTGGCTCCTGCAAAAATCTATGGTTCAGCGTGCT	12	-	13183147-13183190:13183735-13183740		PREDICTED: Homo sapiens similar to A-kinase anchor protein 150 (AKAP 150) (cAMP-dependent protein kinase regulatory subunit II high affinity binding protein) (P150) (LOC644574), mRNA.					
Homo sapiens	Unigene	Hs.562448	ILMN_115553	HS.562448	Hs.562448		Hs.562448		27878123	BX110406			ILMN_1829472	0007160091	S	183	GGAAAAGAAATAGACCCCAACTCAGGGGTGGGCTGGGATGACTTAGAGAG	12	+	27229019-27229068		BX110406 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998F073561, mRNA sequence					
Homo sapiens	RefSeq	NM_001794.2	ILMN_19514	CDH4	NM_001794.2	NM_001794.2		1002	14589892	NM_001794.2	CDH4	NP_001785.2	ILMN_1769891	0003710706	S	2726	GAAGCTGGCGGACATGTATGGAGGTGGTGAAGAGGATTGACTGACCTCGC	20	+	59942662-59942673:59945190-59945227	20q13.33b-q13.33c	Homo sapiens cadherin 4, type 1, R-cadherin (retinal) (CDH4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2059658] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of axon extension [goid 45773] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC126700; RCAD; CAD4; FLJ40547; FLJ22202; MGC138355	MGC126700; RCAD; CAD4; FLJ40547; FLJ22202; MGC138355
Homo sapiens	RefSeq	XM_001725131.1	ILMN_344466	LOC100129726	XM_001725131.1	XM_001725131.1		100129726	169164013	XM_001725131.1	LOC100129726	XP_001725183.1	ILMN_3187435	0003290762	A	726	CCCTAGGACTCACAGCCAAGAGCAGGTGACCTCAGAGGGACCAGTTTCAC				2p21e	PREDICTED: Homo sapiens similar to hCG1989214 (LOC100129726), mRNA.					
Homo sapiens	RefSeq	NM_017697.2	ILMN_5931	RBM35A	NM_001034915.1	NM_001034915.1		54845	77917531	NM_001034915.1	RBM35A	NP_001030087.1	ILMN_1749180	0000110754	S	2001	TAATCTTAGCGGTGTCCCTCCACAGCCTGGCACGGTGGTCAGAATGCAGG	8	+	95774126-95774175	8q22.1b-q22.1c	Homo sapiens RNA binding motif protein 35A (RBM35A), transcript variant 2, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ20171	FLJ20171
Homo sapiens	RefSeq	NM_080670.2	ILMN_8862	SLC35A4	NM_080670.2	NM_080670.2		113829	39725666	NM_080670.2	SLC35A4	NP_542401.1	ILMN_2105966	0000380189	S	2384	TAAGCCGACACTCCTGACCTCTCTGTTCACCCTGAGGGCTGTCTTGAAGC	5	+	139928594-139928643	5q31.3b	Homo sapiens solute carrier family 35, member A4 (SLC35A4), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	MGC2541	MGC2541
Homo sapiens	Unigene	Hs.518678	ILMN_99482	HS.518678	Hs.518678		Hs.518678		6087692	AW119108			ILMN_1849670	0003830008	S	30	CACGGTCTGGAAGGTGGAAAGTCCAAGATCATGGCTCTGGCAGGTCTCTG	4	+	19357927-19357976		xd89a12.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2604766 3, mRNA sequence					
Homo sapiens	RefSeq	NM_031418.1	ILMN_24810	TMEM16C	NM_031418.1	NM_031418.1		63982	13899226	NM_031418.1	TMEM16C	NP_113606.1	ILMN_2049672	0004900768	S	6372	TGTGCATGCAGTCTGCCTTGACAAGTTGTTCCAAGCTGAAGAGCTTTCAC	11	+	26641141-26641190	11p14.2a	Homo sapiens transmembrane protein 16C (TMEM16C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C11orf25; GENX-3947	C11orf25; GENX-3947
Homo sapiens	RefSeq	NM_207337.1	ILMN_29296	AMN1	NM_207337.1	NM_207337.1		196394	46559738	NM_207337.1	AMN1	NP_997220.1	ILMN_1750880	0006900044	S	1629	CCACGCTTAAACCAACCCCCAAATTTAGCATATTCATTTTGCCATGAGCC	12	-	31715625-31715674	12p11.21b	Homo sapiens antagonist of mitotic exit network 1 homolog (S. cerevisiae) (AMN1), mRNA.					
Homo sapiens	RefSeq	XM_929856.1	ILMN_32214	LOC646892	XM_929856.1	XM_929856.1		646892	89038483	XM_929856.1	LOC646892	XP_934949.1	ILMN_1805329	0005080278	S	197	TGGCTGAGCTCCAGGAGCTTGCCCTGAAGTGGTTCATGGAGACACAGGCC	15	+	76172049-76172098	15q25.1a	PREDICTED: Homo sapiens similar to SH2 domain protein 2A (T cell-specific adapter protein) (TSAd) (VEGF receptor-associated protein) (SH2 domain containing adapter protein) (LOC646892), mRNA.					
Homo sapiens	RefSeq	NM_176883.1	ILMN_27956	TAS2R41	NM_176883.1	NM_176883.1		259287	28882027	NM_176883.1	TAS2R41	NP_795364.1	ILMN_1693303	0001030341	S	870	TCGAAGCGTGTTCTCACAGCTCCTGTTGTTGGCAAGGGGCTTCTGGGTGG	7	+	142885957-142886006	7q35a	Homo sapiens taste receptor, type 2, member 41 (TAS2R41), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	MGC119929; T2R59; T2R41; MGC119928	MGC119929; T2R59; T2R41; MGC119928
Homo sapiens	RefSeq	XM_001723179.1	ILMN_335892	LOC100132472	XM_001723179.1	XM_001723179.1		100132472	169210826	XM_001723179.1	LOC100132472	XP_001723231.1	ILMN_3236391	0006040010	S	219	TAAAGCCAGAGCCGGGCCCGGGGAGAGCCTAGGCTCATCTCTGGTGAACA	17	+	18937889-18937938	17p11.2e	PREDICTED: Homo sapiens hypothetical LOC100132472 (LOC100132472), mRNA.					
Homo sapiens	RefSeq	NM_016561.1	ILMN_23440	BFAR	NM_016561.1	NM_016561.1		51283	7706090	NM_016561.1	BFAR	NP_057645.1	ILMN_1814808	0000610022	S	2161	GGATCCCTTTCTCTGAATGGAGAGATTGAGAGGGATGTCGGGCAGTTCCC	16	+	14669840-14669889	16p13.12a	Homo sapiens bifunctional apoptosis regulator (BFAR), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10716992] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10716992] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10716992] [evidence IDA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 10716992] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BAR; RNF47	BAR; RNF47
Homo sapiens	RefSeq	XM_001723539.1	ILMN_350754	LOC100133654	XM_001723539.1	XM_001723539.1		100133654	169162202	XM_001723539.1	LOC100133654	XP_001723591.1	ILMN_3247952	0007570520	S	380	GGCAAGGGAAGGTCACCGTGTCTATGTCCCAGCAAATTCTGAAGACACAC					PREDICTED: Homo sapiens hypothetical LOC100133654 (LOC100133654), mRNA.					
Homo sapiens	RefSeq	NM_001004759.1	ILMN_163923	OR51T1	NM_001004759.1	NM_001004759.1		401665	52317272	NM_001004759.1	OR51T1	NP_001004759.1	ILMN_1755869	0001260491	S	592	CATGGGGGTCACGAGCTTTCCCATCCATTTTGCTACCACCCAGAAGTGAT	11	+	4860216-4860265	11p15.4c	Homo sapiens olfactory receptor, family 51, subfamily T, member 1 (OR51T1), mRNA.				OR11-26	OR11-26
Homo sapiens	RefSeq	XM_939639.1	ILMN_40830	LOC654116	XM_939639.1	XM_939639.1		654116	89034481	XM_939639.1	LOC654116	XP_944732.1	ILMN_1760610	0004260138	S	107	CGCTGGCGCTGGCGCTGGCGCTGGCCATCCTGCCAGGTTACATCGCATAG					PREDICTED: Homo sapiens similar to Sphingomyelin phosphodiesterase precursor (Acid sphingomyelinase) (aSMase) (LOC654116), mRNA.					
Homo sapiens	RefSeq	NM_000954.5	ILMN_19248	PTGDS	NM_000954.5	NM_000954.5		5730	38505192	NM_000954.5	PTGDS	NP_000945.3	ILMN_1664464	0001820379	S	612	CCTGCCCCAAACCGATAAGTGCATGACGGAACAATAGGACTCCCCAGGGC	9	+	138994544-138994557:138995106-138995128:138995852-138995864	9q34.3e	Homo sapiens prostaglandin D2 synthase 21kDa (brain) (PTGDS), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 7692978] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae [goid 5791] [pmid 9065498] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the frequency, rate or extent of sleep; a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals [goid 45187] [evidence IEA]; The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [evidence ISS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence ISS]; Any process that modulates the frequency, rate or extent of sleep; a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals [goid 45187] [evidence ISS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-9-alpha,11-alpha-epidioxy-15-hydroxyprosta-5,13-dienoate = (5Z,13E)-(15S)-9-alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate [goid 4667] [evidence ISS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence ISS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence ISS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	PGD2; PGDS; PGDS2; PDS	PGD2; PGDS; PGDS2; PDS
Homo sapiens	RefSeq	NM_022445.2	ILMN_172154	TPK1	NM_001042482.1	NM_001042482.1		27010	110227856	NM_001042482.1	TPK1	NP_001035947.1	ILMN_1804629	0001050079	S	2004	TGAAAGGAGCAGTGGCCCGCGTGATTGTGGCATTTAAGGAGCAGTGGCCC	7	-	144149418-144149467	7q35a-q35b	Homo sapiens thiamin pyrophosphokinase 1 (TPK1), transcript variant 2, mRNA.		The chemical reactions and pathways involving thiamin (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 6772] [evidence IEA]; The chemical reactions and pathways resulting in the formation of thiamin diphosphate, a derivative of thiamin (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle [goid 9229] [evidence IEA]; The chemical reactions and pathways resulting in the formation of thiamin diphosphate, a derivative of thiamin (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle [goid 9229] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + thiamin = AMP + thiamin diphosphate [goid 4788] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + thiamin = AMP + thiamin diphosphate [goid 4788] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PP20; HTPK1	HTPK1
Homo sapiens	RefSeq	NM_001042482.1	ILMN_172154	TPK1	NM_001042482.1	NM_001042482.1		27010	110227856	NM_001042482.1	TPK1	NP_001035947.1	ILMN_2367063	0004250609	A	1732	GGGCTGATAATACACACAGTTACTGACTTAGCCTAAACAACCTGGTGCAT	7	-	144149690-144149739	7q35a-q35b	Homo sapiens thiamin pyrophosphokinase 1 (TPK1), transcript variant 2, mRNA.		The chemical reactions and pathways involving thiamin (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 6772] [evidence IEA]; The chemical reactions and pathways resulting in the formation of thiamin diphosphate, a derivative of thiamin (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle [goid 9229] [evidence IEA]; The chemical reactions and pathways resulting in the formation of thiamin diphosphate, a derivative of thiamin (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle [goid 9229] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + thiamin = AMP + thiamin diphosphate [goid 4788] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + thiamin = AMP + thiamin diphosphate [goid 4788] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PP20; HTPK1	PP20; HTPK1
Homo sapiens	RefSeq	NM_031480.2	ILMN_8030	RIOK1	NM_031480.2	NM_031480.2		83732	23510355	NM_031480.2	RIOK1	NP_113668.2	ILMN_1652487	0005390056	I	432	TGGAGGAAGCAACCCACAGGCAAATCGACAGACCTCCGACAGCAGTTCAG	6	+	7338517-7338535:7340285-7340315	6p24.3c	Homo sapiens RIO kinase 1 (yeast) (RIOK1), transcript variant 1, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ30006; MGC12903; AD034; bA288G3.1	FLJ30006; MGC12903; AD034; bA288G3.1
Homo sapiens	RefSeq	NM_031480.2	ILMN_8030	RIOK1	NM_031480.2	NM_031480.2		83732	23510355	NM_031480.2	RIOK1	NP_113668.2	ILMN_1797534	0000060500	A	2333	CACCCACAGTTCAGCTGGCTGTTGATTTTCACTGCAACTCTGCCTTTGTG	6	+	7363125-7363174	6p24.3c	Homo sapiens RIO kinase 1 (yeast) (RIOK1), transcript variant 1, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ30006; MGC12903; AD034; bA288G3.1	FLJ30006; MGC12903; AD034; bA288G3.1
Homo sapiens	RefSeq	NM_030639.1	ILMN_3098	BHLHB9	NM_030639.1	NM_030639.1		80823	39930462	NM_030639.1	BHLHB9	NP_085142.1	ILMN_1708131	0007210546	S	3715	TGGAAGTTGGTATGGACCAGAAAGCATTCCCAGGACATTTAGGCTATGGC	X	+	101893766-101893815	Xq22.1e	Homo sapiens basic helix-loop-helix domain containing, class B, 9 (BHLHB9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	p60TRP; KIAA1701	p60TRP; KIAA1701
Homo sapiens	RefSeq	XM_376787.3	ILMN_40627	RPS26P10	XM_376787.4	XM_376787.4		401470	113420157	XM_376787.4	RPS26P10	XP_376787.1	ILMN_1657950	0000620019	S	67	CCGCCACCACGCGCAGCCTATTCGCCGCACTAACTGTGCCCGATGTGTGC	8	-	93225748-93225797	8q21.3f	PREDICTED: Homo sapiens ribosomal protein S26 pseudogene 10 (RPS26P10), mRNA.					
Homo sapiens	RefSeq	NM_198407.1	ILMN_3905	GHSR	NM_198407.1	NM_198407.1		2693	38455409	NM_198407.1	GHSR	NP_940799.1	ILMN_1806691	0006040026	I	911	GCAACCTCGTGTCCTTTGTCCTCTTCTACCTCAGTGCTGCCATCAACCCC	3	-	173645785-173645834	3q26.31a	Homo sapiens growth hormone secretagogue receptor (GHSR), transcript variant 1a, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 8688086] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [pmid 12890514] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 15232612] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8688086] [evidence IDA]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 15232612] [evidence IDA]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence IEA]; Feeding behavior in a fully developed and mature organism [goid 8343] [evidence ISS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 8688086] [evidence IDA]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [evidence IEA]; The regulated release of growth hormone from secretory granules into the blood [goid 30252] [pmid 16511605] [evidence TAS]; Any process that increases appetite [goid 32100] [evidence IEA]; Any process that increases appetite [goid 32100] [evidence ISS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 beta production [goid 32691] [pmid 15232612] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [pmid 16511605] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42536] [pmid 15232612] [evidence IDA]; Any process that increases the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45409] [pmid 15232612] [evidence IDA]; The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta [goid 46697] [pmid 17494105] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [pmid 15232612] [evidence IDA]; Any process that modulates the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51963] [evidence IEA]	 [goid 1616] [pmid 8688086] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [pmid 8688086] [evidence IDA]		
Homo sapiens	RefSeq	NM_003976.2	ILMN_7178	ARTN	NM_003976.2	NM_003976.2		9048	16950639	NM_003976.2	ARTN	NP_003967.1	ILMN_1727040	0004760468	I	127	CTGCTGGGTTGAGTCTAGCTGTGTAGGCCCCTTGTTCCTCACCTGGAGAA	1	+	44173744-44173793	1p34.1f	Homo sapiens artemin (ARTN), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9883723] [evidence TAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [pmid 9883723] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	EVN; NBN	EVN; NBN
Homo sapiens	Unigene	Hs.582985	ILMN_135166	HS.582985	Hs.582985		Hs.582985		3753355	AI200749			ILMN_1818205	0006580673	S	332	ACTTGAGTGGCAGAGAATCCCAGAGGAGGTGGAGTGGCATCGCGGGGAGA	6	-	44601062-44601111		qf55h11.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1753989 3, mRNA sequence					
Homo sapiens	RefSeq	XR_037352.1	ILMN_341560	LOC100132275	XR_037352.1	XR_037352.1		100132275	169208354	XR_037352.1	LOC100132275		ILMN_3240875	0005690612	S	47	GTGTACTCACGGGAGGACTCGCAGACGTTACTGCCTTCTTGCGTGCCCCG	15	+	19663-19712		PREDICTED: Homo sapiens misc_RNA (LOC100132275), miscRNA.					
Homo sapiens	Unigene	Hs.554537	ILMN_112011	HS.554537	Hs.554537		Hs.554537		4218189	AJ011593			ILMN_1871601	0006900753	S	234	CCTTCCAGGATTTCTAGAGAGGAGCATATGGAACCGTGGATCGAAGGGGC	11	-	27738422-27738471		Homo sapiens trapped 3 terminal exon, clone A2C4					
Homo sapiens	RefSeq	XM_932285.1	ILMN_30874	LOC644652	XM_932285.2	XM_932285.2		644652	113429254	XM_932285.2	LOC644652	XP_937378.1	ILMN_1776383	0004890521	S	522	GGTGACTGCACCAAAACACCAGGAAGAAAAGGATGGGGCACGGCTGCACA	22	+	14799614-14799663	22q11.1c	PREDICTED: Homo sapiens hypothetical LOC644652 (LOC644652), mRNA.					
Homo sapiens	RefSeq	NM_001006636.1	ILMN_13831	GTDC1	NM_001006636.1	NM_001006636.1		79712	54859762	NM_001006636.1	GTDC1	NP_001006637.1	ILMN_1762741	0001820170	I	1287	GGCATTGGGATCTTCTGTCTTACACTGGGGCTACTTACCCAGCAAAGATG	2	-	144431304-144431353	2q22.2a-q22.3a	Homo sapiens glycosyltransferase-like domain containing 1 (GTDC1), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	mat-Xa	mat-Xa
Homo sapiens	Unigene	Hs.197143	ILMN_81443	HS.197143	Hs.197143		Hs.197143		34532879	AK126405			ILMN_1913060	0001440064	S	1793	TGAGAGCTTCCCCTGAGGACTCTGCAAAACGAGGTGGTGTCTGGTTTGGA	12	-	107206207-107206256		Homo sapiens cDNA FLJ44441 fis, clone UTERU2020242					
Homo sapiens	RefSeq	XM_372864.3	ILMN_33811	LOC391241	XM_372864.3	XM_372864.3		391241	89058026	XM_372864.3	LOC391241	XP_372864.3	ILMN_1789148	0000990400	S	349	ATCCAGCCGGCGGAGGGGAGCTTCGAGGGTAACTGGAAGGTACCCAGGAT					PREDICTED: Homo sapiens similar to Dickkopf-like protein 1 precursor (Soggy-1 protein) (SGY-1) (LOC391241), mRNA.					
Homo sapiens	RefSeq	XM_927835.1	ILMN_42937	LOC644736	XM_927835.1	XM_927835.1		644736	88965547	XM_927835.1	LOC644736	XP_932928.1	ILMN_1691522	0001820291	S	115	CAGTTCAAGAACGCTGACAACACAAAAAGCTGCCGCACCTCCTTTCCTCC	3	+	105733563-105733612		PREDICTED: Homo sapiens hypothetical protein LOC644736 (LOC644736), mRNA.					
Homo sapiens	RefSeq	NM_000029.2	ILMN_1261	AGT	NM_000029.2	NM_000029.2		183	73622269	NM_000029.2	AGT	NP_000020.1	ILMN_1813530	0002850301	S	1661	TCAGCGATGTGTCACCCCCAGTCTCCCACCTTTTCTTCTAATGAGTCGAC	1	-	228905370-228905419	1q42.2a	Homo sapiens angiotensinogen (serpin peptidase inhibitor, clade A, member 8) (AGT), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 6089875] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Disruption of theca cell layer releasing follicular fluid and/or the oocyte [goid 1543] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 17159080] [evidence NAS]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of production of a cytokine [goid 1819] [pmid 17906677] [evidence TAS]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [pmid 10406457] [evidence TAS]; The decrease in blood vessel diameter as a result of the release of angiotensin into the blood stream [goid 1998] [evidence IEA]; The physiological response of the kidneys to a decrease in blood flow [goid 1999] [evidence IEA]; The process by which an increase in active angiotensin stimulates the adrenal cortices to secrete aldosterone [goid 2018] [evidence IEA]; The process by which angiotensin directly modulates the rate of urine output by the kidney [goid 2019] [evidence IEA]; The process by which an angiotensin-mediated signaling system present in the brain regulates the force with which blood passes through the circulatory system [goid 2035] [evidence IEA]; Any process that modulates the frequency, rate, or extent of natriuresis, the process of renal sodium excretion [goid 3078] [pmid 17159080] [evidence NAS]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [pmid 17906677] [evidence TAS]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [pmid 17159080] [evidence TAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of guanylyl cyclase and a subsequent increase in the concentration of cyclic GMP [goid 7199] [pmid 17159080] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 17159080] [evidence NAS]; A series of molecular signals mediated by the detection of nitric oxide (NO) [goid 7263] [pmid 17159080] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8513325] [evidence TAS]; The establishment of the barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier [goid 8065] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IEA]; Any process that increases the rate, frequency, or extent of the orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 10595] [pmid 15652490] [evidence IDA]; Any process that increases the rate, frequency or extent of the enlargement or overgrowth of all or part of the heart due to an increase in size (not length) of individual cardiac muscle fibers, without cell division [goid 10613] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14068] [pmid 15652490] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle activity stimulus. This process occurs as part of the regulation of muscle adaptation [goid 14873] [evidence ISS]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 17159080] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IEA]; Any process that activates or increases the activity of the enzyme NAD(P)H oxidase [goid 33864] [pmid 17159080] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IEA]; The specific actions or reactions of an organism relating to the intake of liquids, especially water [goid 42756] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 10406457] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids [goid 45723] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity [goid 45742] [pmid 15652490] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism [goid 46622] [evidence IEA]; A change in morphology and behavior of an astrocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 48143] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [evidence ISS]; The multiplication or reproduction of smooth muscle cells, resulting in the expansion of a cell population [goid 48659] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [pmid 17906677] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [pmid 17159080] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [pmid 15652490] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 17906677] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the nerve growth factor receptor signaling pathway [goid 51387] [pmid 10406457] [evidence IDA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 3397061] [evidence TAS]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence ISS]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 1378723] [evidence IC ]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 10406457] [evidence TAS]; Interacting selectively with a type 1 angiotensin receptor [goid 31702] [evidence IEA]; Interacting selectively with a type 2 angiotensin receptor [goid 31703] [evidence IEA]	SERPINA8; ANHU	SERPINA8; ANHU
Homo sapiens	RefSeq	NM_205860.1	ILMN_14912	NR5A2	NM_205860.1	NM_205860.1		2494	45545404	NM_205860.1	NR5A2	NP_995582.1	ILMN_1688932	0003140575	I	320	CCTTGTCATGCTGCCCAAAGTGGAGACGGAAGCCCTGGGACTGGCTCGAT	1	+	198275458-198275507	1q32.1a	Homo sapiens nuclear receptor subfamily 5, group A, member 2 (NR5A2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9786908] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9786908] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9786908] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 16289203] [evidence TAS]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 16289203] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 9786908] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12040021] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 16289203] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FTF; B1F2; FTZ-F1beta; hB1F; hB1F-2; LRH-1; B1F; FTZ-F1; CPF	FTF; B1F2; FTZ-F1beta; hB1F; hB1F-2; LRH-1; B1F; FTZ-F1; CPF
Homo sapiens	RefSeq	NM_024122.2	ILMN_11248	APOO	NM_024122.2	NM_024122.2		79135	34147363	NM_024122.2	APOO	NP_077027.1	ILMN_1721623	0002690132	S	661	CCCTCTATTATCCACAACAAGCCATCGTGTTTGCCCAGGTCAGTGGGGAG	X	-	23784408-23784420:23786680-23786716	Xp22.11a	Homo sapiens apolipoprotein O (APOO), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]	MGC4825; My025; FAM121B	MGC4825; My025; FAM121B
Homo sapiens	RefSeq	NM_004655.2	ILMN_26857	AXIN2	NM_004655.2	NM_004655.2		8313	61676920	NM_004655.2	AXIN2	NP_004646.2	ILMN_1724480	0001070189	S	3987	ACAGTACCTGTACCTGCACGGTCACCCGCTCCGTGTGTCGCCCTATATTG	17	-	60955365-60955414	17q24.1a	Homo sapiens axin 2 (conductin, axil) (AXIN2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12072559] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed [goid 1957] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10049590] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC126582; DKFZp781B0869; AXIL	MGC126582; DKFZp781B0869; AXIL
Homo sapiens	RefSeq	NR_003233.1	ILMN_183577	SNORD113-5	NR_003233.1	NR_003233.1		767565	115432113	NR_003233.1	SNORD113-5		ILMN_3308183	0001010669	S	20	GTGGAGGTGTCTGAATCAACACTTTTGATTAAGCCCTCTGTGTAACTCTG	14	+	100474296-100474345	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 113-5 (SNORD113-5), small nucleolar RNA.				14q(I-5)	14q(I-5)
Homo sapiens	RefSeq	XR_038681.1	ILMN_339143	LOC643507	XR_038681.1	XR_038681.1		643507	169217033	XR_038681.1	LOC643507		ILMN_3280735	0007510017	M	700	AGACGGGCACACCTGGCTATCGGGGTGAACACATCAATCTGCTCATCCAC				Xp11.23f	PREDICTED: Homo sapiens misc_RNA (LOC643507), miscRNA.					
Homo sapiens	RefSeq	XM_937670.1	ILMN_31066	LOC648603	XM_937670.1	XM_937670.1		648603	89060749	XM_937670.1	LOC648603	XP_942763.1	ILMN_1662141	0001090010	S	36	TTGGCAAGAAGCTGAAGTTGTTTTATGCGGAGGAACCAAAAGCATGAGCC				Xp11.23c	PREDICTED: Homo sapiens similar to 3-ketoacyl-CoA thiolase, mitochondrial (Beta-ketothiolase) (Acetyl-CoA acyltransferase) (Mitochondrial 3-oxoacyl-CoA thiolase) (T1) (LOC648603), mRNA.					
Homo sapiens	RefSeq	NM_015342.1	ILMN_27461	PPWD1	NM_015342.1	NM_015342.1		23398	24308048	NM_015342.1	PPWD1	NP_056157.1	ILMN_2223380	0000770379	S	1469	GAGTTTCGGACAGTGCCATTATCCACACCAGCATGGGAGACATTCACACC	5	+	64914736-64914785	5q12.3b	Homo sapiens peptidylprolyl isomerase domain and WD repeat containing 1 (PPWD1), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	KIAA0073	KIAA0073
Homo sapiens	RefSeq	NM_004554.3	ILMN_23517	NFATC4	NM_004554.3	NM_004554.3		4776	37595561	NM_004554.3	NFATC4	NP_004545.2	ILMN_1796018	0003120521	S	4584	TCAGCCCCCTGCCAGAGTCACTGCCCCATAATCACCATGTCAGAAGGGAC	14	+	23918333-23918382	14q12a	Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 (NFATC4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7749981] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 7749981] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 7749981] [evidence TAS]	NFAT3; NF-ATc4	NFAT3; NF-ATc4
Homo sapiens	RefSeq	NM_012074.1	ILMN_27458	DPF3	NM_012074.2	NM_012074.2		8110	110347434	NM_012074.2	DPF3	NP_036206.2	ILMN_1734380	0002600128	S	3936	AAGAATGTGGGGATCGAGCAGCCTTCTTCTTTGGGACCCCTCGATATCCC				14q24.2b	Homo sapiens D4, zinc and double PHD fingers, family 3 (DPF3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8812431] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14079; CERD4	FLJ14079; CERD4
Homo sapiens	RefSeq	NM_198204.1	ILMN_14805	MLX	NM_198204.1	NM_198204.1		6945	38201611	NM_198204.1	MLX	NP_937847.1	ILMN_2401618	0005220484	A	1291	TGAAGGGTGAAAGGGCACCTTGTGCCTAGACTAGGGCTGCCTGGTCAGTC	17	+	37977638-37977687	17q21.31a	Homo sapiens MAX-like protein X (MLX), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10918583] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10918583] [evidence IDA]	The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11230181] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10918583] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 11230181] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11230181] [evidence IDA]	TCFL4; MXD7; MAD7	TCFL4; MXD7; MAD7
Homo sapiens	RefSeq	XR_038286.1	ILMN_345697	LOC100127893	XR_038286.1	XR_038286.1		100127893	169168188	XR_038286.1	LOC100127893		ILMN_3188806	0004070373	A	353	GTGGAACCTTTGTGAAGCTCAACAGGCTTCAGTTAACATGCTGAGGATTG				5q14.1e	PREDICTED: Homo sapiens misc_RNA (LOC100127893), miscRNA.					
Homo sapiens	RefSeq	NM_001099697.1	ILMN_309040	RSPH10B2	NM_001099697.1	NM_001099697.1		728194	153792460	NM_001099697.1	RSPH10B2	NP_001093167.1	ILMN_3239279	0006510379	S	2667	AGCAGCGGAAGATGGAAGATGACGAACTGGAAGCAAGGCTGAACATCTTT	7	+	6797294-6797308:6797309-6797343	7p22.1a	Homo sapiens radial spoke head 10 homolog B2 (Chlamydomonas) (RSPH10B2), mRNA.				FLJ36092	FLJ36092
Homo sapiens	RefSeq	NR_031609.1	ILMN_388537	MIR1204	NR_031609.1	NR_031609.1		100302185	269847096	NR_031609.1	MIR1204		ILMN_3310391	0002690180	S	17	CCATTATTTGAGATGAGTTACATCTTGGAGGTGAGGACGTGCCTCGTGGT					Homo sapiens microRNA 1204 (MIR1204), microRNA.					
Homo sapiens	RefSeq	NM_058243.1	ILMN_22169	BRD4	NM_058243.1	NM_058243.1		23476	19718730	NM_058243.1	BRD4	NP_490597.1	ILMN_1736981	0005550762	I	4838	TTGAACAGACCCCCCGACCCTCCCCCACAAGCCTTTAATTGAGAGCCGCT	19	-	15209611-15209660	19p13.12b	Homo sapiens bromodomain containing 4 (BRD4), transcript variant long, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18305892] [evidence IPI]	HUNKI; MCAP; CAP	HUNKI; MCAP; CAP
Homo sapiens	RefSeq	XM_927780.1	ILMN_46393	LOC644679	XM_927780.1	XM_927780.1		644679	89031297	XM_927780.1	LOC644679	XP_932873.1	ILMN_1653033	0004880719	S	45	GCAGTGGTGGTTCAAGAAGTTTTGCAATGGAGATGAGAGGCTGAAAGATG	10	+	56782175-56782224		PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC644679), mRNA.					
Homo sapiens	RefSeq	NM_002516.1	ILMN_23436	NOVA2	NM_002516.1	NM_002516.1		4858	5902723	NM_002516.1	NOVA2	NP_002507.1	ILMN_1788388	0002370685	S	1264	AAGGAGCTGGTGGAGATTGCGGTGCCTGAGAACCTGGTGGGAGCCATCCT	19	-	51135174-51135223	19q13.32a	Homo sapiens neuro-oncological ventral antigen 2 (NOVA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10735272] [evidence NAS]	ANOVA; NOVA3	ANOVA; NOVA3
Homo sapiens	RefSeq	XM_937313.1	ILMN_38659	ZCCHC16	XM_937313.1	XM_937313.1		340595	89060976	XM_937313.1	ZCCHC16	XP_942406.1	ILMN_2382998	0005700162	A	786	CCAGCTGCCTCTCACCCCAGCCAAACGAGCCCGCCAGCAAGAAACTCAGT				Xq23a	PREDICTED: Homo sapiens zinc finger, CCHC domain containing 16 (ZCCHC16), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_940684.1	ILMN_35117	LOC648585	XM_940684.1	XM_940684.1		648585	89061980	XM_940684.1	LOC648585	XP_945777.1	ILMN_1668466	0006270215	A	129	CACACCTGGCTGGGTTTCAGATCCCTTAGTTTTGGGTGCCCAAGTTCACG					PREDICTED: Homo sapiens similar to p53-regulated apoptosis-inducing protein 1, transcript variant 1 (LOC648585), mRNA.					
Homo sapiens	RefSeq	NM_017686.1	ILMN_24247	GDAP2	NM_017686.2	NM_017686.2		54834	142382942	NM_017686.2	GDAP2	NP_060156.1	ILMN_1789059	0007320661	S	2566	CAGCATCTCTTGAGTTGCCTGCATCAGTGTGGAGGAAGTGTGTCACAGTG	1	-	118213795-118213844	1p12c	Homo sapiens ganglioside induced differentiation associated protein 2 (GDAP2), mRNA.				FLJ20142; dJ776P7.1	FLJ20142; dJ776P7.1
Homo sapiens	RefSeq	XM_001718736.1	ILMN_352698	LOC100129342	XM_001718736.1	XM_001718736.1		100129342	169161349	XM_001718736.1	LOC100129342	XP_001718788.1	ILMN_3273456	0003310762	M	396	GTATTGTGCGGAGAGCCTTTTGTCTGCGGTGCTGCGGCCGTGGGAGCCGG	1	-	39814387-39814436	1p34.2d	PREDICTED: Homo sapiens hypothetical protein LOC100129342 (LOC100129342), mRNA.					
Homo sapiens	RefSeq	NM_001012967.1	ILMN_308046	DDX60L	NM_001012967.1	NM_001012967.1		91351	149274647	NM_001012967.1	DDX60L	NP_001012985.1	ILMN_3243928	0006510735	S	6010	GATGGCCATCTGCAGACCAAGAAGCAAGCCCTCAACAGAACTGAATCTAC	4	-	169515155-169515204	4q32.3e	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like (DDX60L), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ13468; DKFZp781D1175; FLJ31033; FLJ39050	FLJ13468; DKFZp781D1175; FLJ31033; FLJ39050
Homo sapiens	RefSeq	NM_000447.1	ILMN_21140	PSEN2	NM_000447.1	NM_000447.1		5664	4506164	NM_000447.1	PSEN2	NP_000438.1	ILMN_2404512	0000020040	A	1721	TGGTGTGCCACAGGCTGCAAGCTGCAGGGAATTTTCATTGGATGCAGTTG	1	+	225149928-225149977	1q42.13a	Homo sapiens presenilin 2 (Alzheimer disease 4) (PSEN2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 9298903] [evidence TAS]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the nuclear inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5639] [pmid 9298903] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15274632] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15274632] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15274632] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [pmid 15274632] [evidence IDA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 9298903] [evidence TAS]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [pmid 15274632] [evidence TAS]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [pmid 8939861] [evidence TAS]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [pmid 15274632] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [pmid 15274632] [evidence TAS]; Any process that activates or increases the activity of an enzyme [goid 43085] [pmid 15274632] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12297508] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AD3L; STM2; PS2; AD4	AD3L; STM2; PS2; AD4
Homo sapiens	RefSeq	NM_005156.4	ILMN_28121	ROD1	NM_005156.4	NM_005156.4		9991	75991711	NM_005156.4	ROD1	NP_005147.3	ILMN_1768197	0006200128	S	6709	AGCACAGCTAGGAGCCTCTGACATTGTCTGGTGTTTTACGTGGTCTGTTC	9	-	114021007-114021056	9q32a	Homo sapiens ROD1 regulator of differentiation 1 (S. pombe) (ROD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10207106] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10207106] [evidence TAS]	DKFZp781I1117	DKFZp781I1117
Homo sapiens	RefSeq	NM_014551.3	ILMN_12341	NCAPH2	NM_152299.2	NM_152299.2		29781	148368977	NM_152299.2	NCAPH2	NP_689512.2	ILMN_1736005	0006370242	A	784	AGGAGCAGCCAATGGAAGTTTCCGTGTGCAGGAGCCCTGTCCCAGCACTC	22	+	49303959-49304008	22q13.33b	Homo sapiens non-SMC condensin II complex, subunit H2 (NCAPH2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]		MGC18000; CAP-H2; MGC8640; MGC5305; hCAP-H2; MGC2455; 384D8-2; MGC15858; 384D8_6; MGC4133	MGC18000; CAP-H2; MGC8640; MGC5305; hCAP-H2; MGC2455; 384D8-2; MGC15858; 384D8_6; MGC4133
Homo sapiens	RefSeq	NM_152299.1	ILMN_12341	NCAPH2	NM_152299.2	NM_152299.2		29781	148368977	NM_152299.2	NCAPH2	NP_689512.2	ILMN_1715908	0002000661	I	1784	GGCCTCCCTGCAGCTGGCCAATGACTACACAGTGGAGATAACCCAGCAGC	22	+	49308446-49308461:49308530-49308563	22q13.33b	Homo sapiens non-SMC condensin II complex, subunit H2 (NCAPH2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]		MGC18000; CAP-H2; MGC8640; MGC5305; hCAP-H2; MGC2455; 384D8-2; MGC15858; 384D8_6; MGC4133	MGC18000; CAP-H2; MGC8640; MGC5305; hCAP-H2; MGC2455; 384D8-2; MGC15858; 384D8_6; MGC4133
Homo sapiens	RefSeq	NM_004336.2	ILMN_10590	BUB1	NM_004336.2	NM_004336.2		699	56118215	NM_004336.2	BUB1	NP_004327.1	ILMN_2202948	0002070224	S	3119	AGGAGGAGAGTGTAAGCCTGAAGGTCTTTTTAGAAGGCTTCCTCATTTGG	2	-	111112194-111112208:111113791-111113825	2q13b	Homo sapiens BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) (BUB1), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [pmid 9660858] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [pmid 9790499] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9790499] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	hBUB1; BUB1L; BUB1A	hBUB1; BUB1L; BUB1A
Homo sapiens	RefSeq	NM_002577.3	ILMN_163942	PAK2	NM_002577.3	NM_002577.3		5062	45827795	NM_002577.3	PAK2	NP_002568.2	ILMN_1712687	0003460133	I	5411	CCGAAGTCTTTCCCATTCACTTCTCTAGAAAGCTGCCAAGACAGAGGCAG	3	+	198043374-198043423	3q29g	Homo sapiens p21 (CDKN1A)-activated kinase 2 (PAK2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15234964] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [pmid 10748018] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7744004] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 11805089] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11805089] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16837009] [evidence IPI]	PAK65; PAKgamma	PAK65; PAKgamma
Homo sapiens	RefSeq	NM_139284.1	ILMN_25832	LGI4	NM_139284.1	NM_139284.1		163175	21281672	NM_139284.1	LGI4	NP_644813.1	ILMN_1716461	0006980121	S	2414	TGCAGGCTGGTGCACTGCATGGAGTCGAGGTGGAGGTCACGTGCAGAGCT	19	-	40307607-40307656	19q13.12a	Homo sapiens leucine-rich repeat LGI family, member 4 (LGI4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LGIL3	LGIL3
Homo sapiens	RefSeq	NM_033031.1	ILMN_34938	CCNB3	NM_033031.2	NM_033031.2		85417	90669306	NM_033031.2	CCNB3	NP_149020.2	ILMN_1754746	0001770239	A	4265	TGAACTGTGATTGTGAGGCTCAGGGCCTGGTACTCTAGCAGCAGCCACAG	X	+	50068430-50068479	Xp11.22c	Homo sapiens cyclin B3 (CCNB3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Homo sapiens	RefSeq	NM_033031.1	ILMN_34938	CCNB3	NM_033031.2	NM_033031.2		85417	90669306	NM_033031.2	CCNB3	NP_149020.2	ILMN_1705757	0006520133	I	3311	CCATAACAGAGAAGTCCAGCATTGCAACCATGACCAGCGTGGGCAAGTCC	X	+	50054048-50054097	Xp11.22c	Homo sapiens cyclin B3 (CCNB3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Homo sapiens	Unigene	Hs.570403	ILMN_122584	HS.570403	Hs.570403		Hs.570403		46570919	BX384892			ILMN_1860117	0002000670	S	770	AGCCCTTTCCAGAACAAAGCCAGCAGGGAGAGTGTGCCATAGACCCCCGA	21	-	43452474-43452523		BX384892 Homo sapiens B CELLS (RAMOS CELL LINE) COT 25-NORMALIZED Homo sapiens cDNA clone CS0DL003YD10 5-PRIME, mRNA sequence					
Homo sapiens	RefSeq	NM_198718.1	ILMN_10315	PTGER3	NM_198718.1	NM_198718.1		5733	38505185	NM_198718.1	PTGER3	NP_942011.1	ILMN_2290444	0002000349	I	1574	TGAGCACTTTCCATGTGTTGATTGACTCGGAAAGGTGGGAGATTACCAGC	1	-	71418454-71418503	1p31.1j	Homo sapiens prostaglandin E receptor 3 (subtype EP3) (PTGER3), transcript variant 8, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9073510] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 10336471] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10336471] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8307176] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IEA]; The synthesis of RNA on a template of DNA [goid 6351] [pmid 10336471] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8307176] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 10947062] [evidence TAS]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IEA]; The process of renal water excretion [goid 30146] [evidence IEA]	Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 9073510] [evidence NAS]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [pmid 10336471] [evidence TAS]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 10947062] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EP3-III; EP3-I; MGC141829; EP3-II; EP3; EP3e; MGC27302; MGC141828; EP3-IV	EP3-III; EP3-II; EP3e; MGC27302; MGC141828; EP3-I; MGC141829; EP3; EP3-IV
Homo sapiens	RefSeq	NM_198718.1	ILMN_10315	PTGER3	NM_198718.1	NM_198718.1		5733	38505185	NM_198718.1	PTGER3	NP_942011.1	ILMN_2290453	0006040446	I	1575	GAGCACTTTCCATGTGTTGATTGACTCGGAAAGGTGGGAGATTACCAGCA	1	-	71418453-71418502	1p31.1j	Homo sapiens prostaglandin E receptor 3 (subtype EP3) (PTGER3), transcript variant 8, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9073510] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 10336471] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10336471] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8307176] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IEA]; The synthesis of RNA on a template of DNA [goid 6351] [pmid 10336471] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8307176] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 10947062] [evidence TAS]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IEA]; The process of renal water excretion [goid 30146] [evidence IEA]	Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 9073510] [evidence NAS]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [pmid 10336471] [evidence TAS]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 10947062] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EP3-III; EP3-I; MGC141829; EP3-II; EP3; EP3e; MGC27302; MGC141828; EP3-IV	EP3-III; EP3-II; EP3e; MGC27302; MGC141828; EP3-I; MGC141829; EP3; EP3-IV
Homo sapiens	RefSeq	NM_198716.1	ILMN_10315	PTGER3	NM_198718.1	NM_198718.1		5733	38505185	NM_198718.1	PTGER3	NP_942011.1	ILMN_1743361	0001710703	A	1029	ATCTCAGTCCAGTGCCCAGTGGGGCCGCATCACGACCGAGACGGCCATTC	1	-	71512413-71512462	1p31.1j	Homo sapiens prostaglandin E receptor 3 (subtype EP3) (PTGER3), transcript variant 8, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9073510] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 10336471] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10336471] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8307176] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IEA]; The synthesis of RNA on a template of DNA [goid 6351] [pmid 10336471] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8307176] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 10947062] [evidence TAS]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IEA]; The process of renal water excretion [goid 30146] [evidence IEA]	Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 9073510] [evidence NAS]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [pmid 10336471] [evidence TAS]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 10947062] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EP3-III; EP3-I; MGC141829; EP3-II; EP3; EP3e; MGC27302; MGC141828; EP3-IV	EP3-III; EP3-II; EP3e; MGC27302; MGC141828; EP3-I; MGC141829; EP3; EP3-IV
Homo sapiens	RefSeq	NR_004396.1	ILMN_352847	SNORD1B	NR_004396.1	NR_004396.1		677849	161087016	NR_004396.1	SNORD1B		ILMN_3245554	0002370091	S	28	CCCTGTCTGAAGGCAAAGAAAGGCCTTTCTGTGTGGAATTTGAATATCTG	17	+	74557217-74557266		Homo sapiens small nucleolar RNA, C/D box 1B (SNORD1B), small nucleolar RNA.				snR38B; R38B	snR38B; R38B
Homo sapiens	RefSeq	NM_015150.1	ILMN_29470	RFTN1	NM_015150.1	NM_015150.1		23180	41872576	NM_015150.1	RFTN1	NP_055965.1	ILMN_1800787	0001260497	S	2891	CTGGCGAACCTTGGAGAGGGAATGCTGATTGTCTTGACCAAACCCACAGC	3	-	16368299-16368348	3p24.3e-p24.3d	Homo sapiens raftlin, lipid raft linker 1 (RFTN1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			PIG9; RAFTLIN; KIAA0084; MGC141678; PIB10; MGC44480; MIG2; FLJ23866	PIG9; RAFTLIN; KIAA0084; MGC141678; PIB10; MGC44480; MIG2; FLJ23866
Homo sapiens	RefSeq	NM_001013659.2	ILMN_16768	ZNF793	NM_001013659.2	NM_001013659.2		390927	148727277	NM_001013659.2	ZNF793	NP_001013681.2	ILMN_3251531	0003400014	S	6675	GGTGGGTAATGCAGGTAGGTTATGGGGGAGTCAGGGGTGTAGGGAAAAGG	19	+	38033793-38033842	19q13.12c	Homo sapiens zinc finger protein 793 (ZNF793), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_935765.1	ILMN_37475	LOC641860	XM_935765.1	XM_935765.1		641860	89027635	XM_935765.1	LOC641860	XP_940858.1	ILMN_1808754	0004180220	S	275	CTGTCGCTATCCCTCAACCTCTTTCTCCTTTCAATTTCCACGTCACCCTT					PREDICTED: Homo sapiens hypothetical protein LOC641860 (LOC641860), mRNA.					
Homo sapiens	RefSeq	NM_000728.3	ILMN_12713	CALCB	NM_000728.3	NM_000728.3		797	45439360	NM_000728.3	CALCB	NP_000719.1	ILMN_2109371	0000240719	S	699	CATCTCTCATTGACTTATCTGGTAGCAAACTGGTTCTTTCGGAGCCATCC	11	+	15056421-15056470	11p15.2a	Homo sapiens calcitonin-related polypeptide beta (CALCB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 2985435] [evidence TAS]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 2985435] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2985435] [evidence TAS]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IEA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 2985435] [evidence TAS]	CGRP-II; FLJ30166; CGRP2; CALC2	CGRP-II; FLJ30166; CGRP2; CALC2
Homo sapiens	RefSeq	NM_144609.1	ILMN_306768	CCDC43	NM_001099225.1	NM_001099225.1		124808	151101334	NM_001099225.1	CCDC43	NP_001092695.1	ILMN_1743783	0005550187	S	1705	CAAAGTAGATATTTTATACCAGGGGTTGGCAAACTACTGCCCACGGGCCG	17	-	42755129-42755178	17q21.31c	Homo sapiens coiled-coil domain containing 43 (CCDC43), transcript variant 2, mRNA.				FLJ31795	FLJ31795
Homo sapiens	Unigene	Hs.559602	ILMN_113742	HS.559602	Hs.559602		Hs.559602		1306265	W25998			ILMN_1835017	0002120328	S	151	AGGGGCAGTATACTCTTATCAGTGCGAGGTAGCTGGGGCCTGTGATAGTT	1	-	180617817-180617866		17g11 Human retina cDNA randomly primed sublibrary Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_926904.1	ILMN_39841	LOC642933	XM_926904.1	XM_926904.1		642933	88984786	XM_926904.1	LOC642933	XP_931997.1	ILMN_1688976	0006020180	S	1537	ACAGATTAGAAACAAATAGCACTCACTCTGACATCATCTACTGTTTAGAG	5	-	106785273-106785322		PREDICTED: Homo sapiens hypothetical protein LOC642933 (LOC642933), mRNA.					
Homo sapiens	RefSeq	XM_944321.1	ILMN_42108	LOC402560	XM_944321.1	XM_944321.1		402560	89026202	XM_944321.1	LOC402560	XP_949414.1	ILMN_1769288	0006480240	A	619	CAGGGACAGCACTGGGTCTGTGCAGAGTTGAGAGATGGTGATGACATGCC					PREDICTED: Homo sapiens hypothetical LOC402560 (LOC402560), mRNA.					
Homo sapiens	RefSeq	XM_935724.1	ILMN_46642	LOC641958	XM_935724.1	XM_935724.1		641958	89026856	XM_935724.1	LOC641958	XP_940817.1	ILMN_1655624	0006840279	S	1	ATGGTGCTGCTTGGCAGCAGCTCACTGGGACTTGCCCAGAAAGTGGTGAA					PREDICTED: Homo sapiens similar to Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate synthetase II) (PRS-II) (LOC641958), mRNA.					
Homo sapiens	RefSeq	NM_001080840.1	ILMN_168174	HLA-A29.1	NM_001080840.1	NM_001080840.1		649853	124249397	NM_001080840.1	HLA-A29.1	NP_001074309.1	ILMN_2165753	0005080692	S	624	ACGGACGCCCCCAAGACGCATATGACTCACCACGCTGTCTCTGACCATGA					Homo sapiens major histocompatibility complex class I HLA-A29.1 (HLA-A29.1), mRNA. XM_001132736 XM_001132742 XM_001132747 XM_001132750 XM_001132753 XM_001132757 XM_001132760 XM_001132769 XM_001132772 XM_001132776 XM_001132779 XM_001132781 XM_001132783 XM_001132785 XM_001132794					
Homo sapiens	RefSeq	NM_005889.2	ILMN_162399	APOBEC1	NM_001644.3	NM_001644.3		339	61743956	NM_001644.3	APOBEC1	NP_001635.2	ILMN_1813881	0000990438	A	489	GCTGGAGGAATTTTGTCAACTACCCACCTGGGGATGAAGCTCACTGGCCA	12	-	7803675-7803724	12p13.31c	Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 (APOBEC1), mRNA.		Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8078915] [evidence TAS]; The conversion of a cytosine residue to uridine in an RNA molecule by deamination [goid 16554] [evidence IEA]; The covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically [goid 16556] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7736571] [evidence TAS]; Catalysis of the reaction: cytidine + H2O = uridine + NH3 [goid 4126] [pmid 7736571] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 7736571] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HEPR; CDAR1; BEDP; APOBEC-1	CDAR1; apobec-1; BEDP
Homo sapiens	RefSeq	NM_145756.1	ILMN_7285	ZNF396	NM_145756.1	NM_145756.1		252884	21955238	NM_145756.1	ZNF396	NP_665699.1	ILMN_1776164	0001440673	S	2117	CCAGAAACTGGCTTAGAGGAGCTCCAAATATGTGGAATTACCACACTCTG	18	-	31201280-31201329	18q12.2a	Homo sapiens zinc finger protein 396 (ZNF396), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IMP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	FLJ31213; ZSCAN14	FLJ31213; ZSCAN14
Homo sapiens	RefSeq	NM_145756.1	ILMN_7285	ZNF396	NM_145756.1	NM_145756.1		252884	21955238	NM_145756.1	ZNF396	NP_665699.1	ILMN_2057369	0001400440	S	2491	AAGGAAGCACCCATCTTCACTTGGTGCTGCCATCAACTTTGTAAGATTGC	18	-	31200906-31200955	18q12.2a	Homo sapiens zinc finger protein 396 (ZNF396), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IMP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	FLJ31213; ZSCAN14	FLJ31213; ZSCAN14
Homo sapiens	RefSeq	XM_001724605.1	ILMN_339640	LOC100131332	XM_001724605.1	XM_001724605.1		100131332	169171376	XM_001724605.1	LOC100131332	XP_001724657.1	ILMN_3239357	0000990681	S	1817	GTGCCTGCCTCCTGGCTGACTTTTGAAGCCCAAAACTTCCTCAAATCAGC					PREDICTED: Homo sapiens hypothetical protein LOC100131332 (LOC100131332), mRNA.					
Homo sapiens	RefSeq	NM_194463.1	ILMN_165119	RNF128	NM_194463.1	NM_194463.1		79589	37588872	NM_194463.1	RNF128	NP_919445.1	ILMN_1707807	0000630296	I	649	TCTGGCTTATGAGAGAGGGGCGTCTGGAGCCGTCATCTTTAACTTCCCCG	X	+	105857198-105857247	Xq22.3b	Homo sapiens ring finger protein 128 (RNF128), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42036] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42036] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]	FLJ23516; GRAIL	GRAIL; FLJ23516
Homo sapiens	RefSeq	NM_032571.2	ILMN_9880	EMR3	NM_032571.3	NM_032571.3		84658	133930785	NM_032571.3	EMR3	NP_115960.2	ILMN_1755873	0005270468	A	2045	GGTCCTGACTCAAAACCCAGTGAGGGGGATGTTTTTCCAGGACAAGTGAA	19	-	14730257-14730283:14736304-14736326	19p13.12b	Homo sapiens egf-like module containing, mucin-like, hormone receptor-like 3 (EMR3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	NM_001031710.1	ILMN_8698	KLHL7	NM_001031710.1	NM_001031710.1		55975	72534709	NM_001031710.1	KLHL7	NP_001026880.1	ILMN_1674458	0000150672	I	3005	ACTCATTTCCTTCCTAGTAATACTTTGCCTTTTTCACTGTGTATGGAATG	7	+	23181453-23181502	7p15.3b	Homo sapiens kelch-like 7 (Drosophila) (KLHL7), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KLHL6; SBBI26	KLHL6; SBBI26
Homo sapiens	RefSeq	NM_213655.1	ILMN_170353	HSN2	NM_213655.1	NM_213655.1		378465	47458035	NM_213655.1	HSN2	NP_998820.1	ILMN_1788711	0006770358	S	1115	CAGCTGCACCTTTTGGCTCTGACGTCTCAATGCCCTTTATCCATCTGCCT	12	+	848371-848420	12p13.33c	Homo sapiens hereditary sensory neuropathy, type II (HSN2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [pmid 15060842] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HSAN2	HSAN2
Homo sapiens	RefSeq	XM_378472.3	ILMN_45174	LOC400236	XM_944198.2	XM_944198.2		400236	113424954	XM_944198.2	LOC400236	XP_949291.2	ILMN_1806892	0000020739	A	1756	GCTTATCTGCCCCCATCAGCGTGGGACCTCAGTTCCTCCTCCAAGGAGAA				14q32.11a	PREDICTED: Homo sapiens hypothetical LOC400236 (LOC400236), mRNA.					
Homo sapiens	RefSeq	XM_942301.1	ILMN_175690	LOC729249	XM_001129755.1	XM_001129755.1		729249	113415744	XM_001129755.1	LOC729249	XP_001129755.1	ILMN_1815405	0004200408	S	538	GCAGGCAAGTGGAGTAGACCTCAGCTGAATTTGGGAGGAAACTGCTTGGT	4	+	120518829-120518878	4q26f	PREDICTED: Homo sapiens similar to kelch-like 2, Mayven; mayven; kelch (Drosophila)-like 2 (Mayven) (LOC729249), mRNA.					
Homo sapiens	RefSeq	NM_001774.2	ILMN_20101	CD37	NM_001774.2	NM_001774.2		951	91807111	NM_001774.2	CD37	NP_001765.1	ILMN_2375825	0001510133	A	722	CTCAGCAGGCTTGGACACCTGGCGCGGTCCAGACACAGTGCAGACATCTG	19	+	49842110-49842159	19q13.33a	Homo sapiens CD37 molecule (CD37), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8436422] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2466944] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2466944] [evidence TAS]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 2466944] [evidence TAS]		TSPAN26; GP52-40; MGC120234	TSPAN26; GP52-40; MGC120234
Homo sapiens	RefSeq	XM_937957.1	ILMN_39134	LOC648878	XM_937957.1	XM_937957.1		648878	89061422	XM_937957.1	LOC648878	XP_943050.1	ILMN_1700543	0004060372	S	152	CCTGGTGGCAAGCTGAATGCACTGGATTCTTTCCATCACAGGAAGGATCG					PREDICTED: Homo sapiens similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) (LOC648878), mRNA.					
Homo sapiens	RefSeq	NM_020366.2	ILMN_178987	RPGRIP1	NM_020366.3	NM_020366.3		57096	112734866	NM_020366.3	RPGRIP1	NP_065099.3	ILMN_1803739	0007400475	S	3750	TGTTAGCCCTGAAGATCTGGCTACCCCAATAGGAAGGCTGAAGGTTTCCC	14	+	20889104-20889153	14q11.2c	Homo sapiens retinitis pigmentosa GTPase regulator interacting protein 1 (RPGRIP1), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]		DKFZp686P0897; CORD9; RGRIP; RPGRIP1d; LCA6; RGI1; RPGRIP	DKFZp686P0897; CORD9; RGRIP; RPGRIP1d; LCA6; RGI1; RPGRIP
Homo sapiens	RefSeq	NM_058176.2	ILMN_11183	HDAC9	NM_058176.2	NM_058176.2		9734	116284378	NM_058176.2	HDAC9	NP_478056.1	ILMN_2408885	0002000156	A	1543	ACCTTGAGGAAGCAGAGGAAGAGCTTCAGGGGGACCAGGCGATGCAGGAA	7	+	18640793-18640842	7p21.1a	Homo sapiens histone deacetylase 9 (HDAC9), transcript variant 1, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12711221] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by removal of acetyl groups [goid 16575] [pmid 10523670] [evidence NAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12711221] [evidence TAS]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 10523670] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp779K1053; HDAC; HDAC9FL; MITR; HD7; HDRP; HDAC9B; KIAA0744; HDAC7B; HDAC7	DKFZp779K1053; HDAC; HDAC9FL; MITR; HD7; HDRP; HDAC9B; KIAA0744; HDAC7B; HDAC7
Homo sapiens	RefSeq	NM_007136.1	ILMN_37182	ZNF80	NM_007136.2	NM_007136.2		7634	89111946	NM_007136.2	ZNF80	NP_009067.2	ILMN_1673299	0002640181	S	1934	CTTTGGCCTTCTGTAAGAGGGGCTTCTCCAAGAGCATGTCACTAGTTTTC	3	-	115436744-115436793	3q13.31a	Homo sapiens zinc finger protein 80 (ZNF80), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	pT17	pT17
Homo sapiens	RefSeq	XM_934248.1	ILMN_45496	LOC653471	XM_934248.1	XM_934248.1		653471	89031272	XM_934248.1	LOC653471	XP_939341.1	ILMN_1715654	0000540494	I	4563	CCTCCTTGTTCTAAAAGAGAGGTGGGGATTGGTTCATGGTCAACACTTTC	10	-	75126244-75126293		PREDICTED: Homo sapiens similar to Ribosome biogenesis protein BMS1 homolog, transcript variant 7 (LOC653471), mRNA.					
Homo sapiens	RefSeq	XM_931830.1	ILMN_31202	LOC643813	XM_931830.1	XM_931830.1		643813	88976546	XM_931830.1	LOC643813	XP_936923.1	ILMN_1658155	0007570100	S	61	ATGAAGAGGGCAAGCAATGTTTTTGGCATCCTGACTACAGTTACATGCAG	4	-	85433516-85433565		PREDICTED: Homo sapiens hypothetical protein LOC643813 (LOC643813), mRNA.					
Homo sapiens	RefSeq	NM_002741.3	ILMN_29215	PKN1	NM_002741.3	NM_002741.3		5585	47132588	NM_002741.3	PKN1	NP_002732.3	ILMN_1662687	0001780246	I	137	GCGCGGGGACCCCTGGCGGGCGGCAGGAGGACATGGCCAGCGACGCCGTG	19	+	14405302-14405333:14405334-14405351	19p13.12c	Homo sapiens protein kinase N1 (PKN1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8135837] [evidence TAS]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8135837] [evidence TAS]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 8805275] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10619026] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12761180] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKCL1; PAK1; PKN; DBK; PRK1; MGC46204	PRKCL1; PAK1; PKN; DBK; PRK1; MGC46204
Homo sapiens	RefSeq	NM_001017534.1	ILMN_21665	CARD16	NM_001017534.1	NM_001017534.1		114769	62953112	NM_001017534.1	CARD16	NP_001017534.1	ILMN_3252556	0006270500	M	375	TCTAGAAGACGCTCAAAGGATATGGAAACAAAAGTTGCAGAGGTGCCATG	11	-	104912323-104912372	11q22.3b	Homo sapiens caspase recruitment domain family, member 16 (CARD16), transcript variant 1, mRNA.				PSEUDO-ICE; COP	PSEUDO-ICE; COP
Homo sapiens	RefSeq	NM_207417.1	ILMN_25383	C9ORF171	NM_207417.1	NM_207417.1		389799	46409465	NM_207417.1	C9orf171	NP_997300.1	ILMN_1663665	0006270246	S	1646	CCCACTCTGGAAAAAGCCTTCCAGGCCAGCGGGTAGACTGCTGAACACAG	9	+	134438353-134438402	9q34.13b	Homo sapiens chromosome 9 open reading frame 171 (C9orf171), mRNA.				MGC148067	MGC148067
Homo sapiens	RefSeq	NM_005290.1	ILMN_10602	GPR15	NM_005290.1	NM_005290.1		2838	4885298	NM_005290.1	GPR15	NP_005281.1	ILMN_2192779	0004540538	S	364	CTCCTGCTCACTTGCATGAGTGTTGACCGCTACCTGGCCATTGTGTGGCC	3	+	98251241-98251290	3q11.2c	Homo sapiens G protein-coupled receptor 15 (GPR15), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8838812] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8838812] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	MGC126828; MGC126830	MGC126828; MGC126830
Homo sapiens	RefSeq	NM_020754.2	ILMN_365330	CDGAP	NM_020754.2	NM_020754.2		57514	186928843	NM_020754.2	CDGAP	NP_065805.2	ILMN_3251486	0000430341	S	7743	GAGCTGCTGTGTTTAGGAGGATTTACCTGGTGCCCTAGAAAGGGCTATGC	3	+	119137987-119138036	3q13.32b-q13.33a	Homo sapiens Cdc42 GTPase-activating protein (CDGAP), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]		
Homo sapiens	RefSeq	NM_017752.2	ILMN_177582	TBC1D8B	NM_017752.2	NM_017752.2		54885	38570100	NM_017752.2	TBC1D8B	NP_060222.2	ILMN_2237474	0002630181	I	5255	GCTCTAGAAAGACACATGTATACAAGGCACTATTGTACACACTTTGCTGA	X	+	106005578-106005627	Xq22.3b	Homo sapiens TBC1 domain family, member 8B (with GRAM domain) (TBC1D8B), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RP11-321G1.1; FLJ20298	RP11-321G1.1; FLJ20298
Homo sapiens	RefSeq	NM_018328.3	ILMN_175384	MBD5	NM_018328.3	NM_018328.3		55777	38202208	NM_018328.3	MBD5	NP_060798.2	ILMN_2217928	0002630707	S	4977	GTCTCTGTGTGATGAGAGTGATCAATGGTCAAGAGATTACTGAGAAACTC	2	+	148987182-148987231	2q23.1a	Homo sapiens methyl-CpG binding domain protein 5 (MBD5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ11113; MRD1; KIAA1461; FLJ30517	FLJ11113; MRD1; KIAA1461; FLJ30517
Homo sapiens	RefSeq	XM_001717007.1	ILMN_346975	LOC729950	XM_001717007.1	XM_001717007.1		729950	169212972	XM_001717007.1	LOC729950	XP_001717059.1	ILMN_3227086	0002710154	A	537	GGTGTGTGTGAGGGCCCAATGCTGGGTCGGCATTTCCTTGTGAAATCCTG				18q11.2c	PREDICTED: Homo sapiens hypothetical LOC729950 (LOC729950), mRNA.					
Homo sapiens	RefSeq	XR_037431.1	ILMN_338783	LOC442041	XR_037431.1	XR_037431.1		442041	169163887	XR_037431.1	LOC442041		ILMN_3203801	0001570647	A	2417	TGACAAGCCTTTCAGCTCGTCCCACAGCCTGTGCTGGCACAACCGGATCA				2q13b	PREDICTED: Homo sapiens misc_RNA (LOC442041), partial miscRNA.					
Homo sapiens	RefSeq	XR_037431.1	ILMN_338783	LOC442041	XR_037431.1	XR_037431.1		442041	169163887	XR_037431.1	LOC442041		ILMN_3280308	0006580114	M	224	AAAAAACATCCCTAAAGCAACTGGATAGTCCCAGAAACATCTCAAGTGAG				2q13b	PREDICTED: Homo sapiens misc_RNA (LOC442041), partial miscRNA.					
Homo sapiens	RefSeq	NM_000920.2	ILMN_172416	PC	NM_001040716.1	NM_001040716.1		5091	106049527	NM_001040716.1	PC	NP_001035806.1	ILMN_1736689	0000010682	I	203	GATTCCACCTGTTGGGCTCTTTCTTCCATTTGCCTCCGCAGATAGTGTCT	11	-	66719930-66719939:66721720-66721759	11q13.1e-q13.1f	Homo sapiens pyruvate carboxylase (PC), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16729965] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 12437512] [evidence EXP]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate [goid 4736] [pmid 12437512] [evidence EXP]; Catalysis of the reaction: ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate [goid 4736] [pmid 7918683] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8048912] [evidence TAS]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [pmid 8048912] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PCB	PCB
Homo sapiens	RefSeq	NM_020416.2	ILMN_18174	PPP2R2C	NM_020416.3	NM_020416.3		5522	109255252	NM_020416.3	PPP2R2C	NP_065149.2	ILMN_1661129	0006020288	I	358	GGCACGGCCTTCAATGGGCGAGGACACGGACACGCGGAAAATTAACCACA	4	-	6524820-6524857:6524858-6524869	4p16.1f	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B, gamma isoform (PPP2R2C), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 10945473] [evidence NAS]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 10945473] [evidence NAS]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]	PR55G; MGC33570; IMYPNO; IMYPNO1; PR52	MGC33570; IMYPNO; IMYPNO1; PR52
Homo sapiens	RefSeq	NM_021795.2	ILMN_183535	ELK4	NM_021795.2	NM_021795.2		2005	41872461	NM_021795.2	ELK4	NP_068567.1	ILMN_1664815	0004390064	I	2920	GAGGTTGAGCACCAGAATCTCAGAATTTACCACCAAAGAACTCATCCATG	1	-	205588454-205588503	1q32.1g	Homo sapiens ELK4, ETS-domain protein (SRF accessory protein 1) (ELK4), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7851904] [evidence NAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 7851904] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1339307] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	SAP1	SAP1
Homo sapiens	RefSeq	NM_138343.2	ILMN_9715	KLC4	NM_138343.2	NM_138343.2		89953	41871964	NM_138343.2	KLC4	NP_612352.1	ILMN_2371152	0004570605	A	905	GAATGATGCCCTTAGCATCCGGGAGAGCACCTTGGGACCTGACCATCCTG	6	+	43034770-43034819	6p21.1d	Homo sapiens kinesin light chain 4 (KLC4), transcript variant 4, mRNA.	Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]		Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KNSL8; bA387M24.3; MGC111777	KNSL8; bA387M24.3; MGC111777
Homo sapiens	RefSeq	NM_000646.1	ILMN_30153	AGL	NM_000646.1	NM_000646.1		178	4557284	NM_000646.1	AGL	NP_000637.1	ILMN_1775082	0001440653	I	229	GTACTGGGATTACAAGCATAAGCCACCGGGCATGGCCCCACTTCTGAGCA	1	+	100090783-100090813:100090814-100090832	1p21.2a	Homo sapiens amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (glycogen debranching enzyme, glycogen storage disease type III) (AGL), transcript variant 6, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9691087] [evidence EXP]; A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages [goid 43033] [pmid 1374391] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [pmid 9691087] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GDE	GDE
Homo sapiens	RefSeq	NM_172097.1	ILMN_23478	CATSPER2	NM_172097.1	NM_172097.1		117155	26051226	NM_172097.1	CATSPER2	NP_742095.1	ILMN_2286014	0002600273	I	1550	GCTCACGCCTGTAATCCCAGCACTTTGGGAAGCCGAGGGGGATGGGTCAT	15	-	43931698-43931747	15q15.3a	Homo sapiens cation channel, sperm associated 2 (CATSPER2), transcript variant 4, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	Cell motility due to movement of cilia or flagella [goid 1539] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC33346	MGC33346
Homo sapiens	RefSeq	NM_134444.3	ILMN_13312	NLRP4	NM_134444.3	NM_134444.3		147945	54792746	NM_134444.3	NLRP4	NP_604393.1	ILMN_1746820	0002630152	S	3042	CTGATTGCGAGGAACCTGGGCTCTGACTCGAACACCTGCAAAGGACAGGG	19	+	61084762-61084765:61084766-61084811	19q13.42c	Homo sapiens NLR family, pyrin domain containing 4 (NLRP4), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PAN2; NALP4; CLR19.5; PYPAF4; FLJ32126; RNH2	PAN2; NALP4; CLR19.5; PYPAF4; FLJ32126; RNH2
Homo sapiens	RefSeq	NM_152428.3	ILMN_10861	FRMPD2	NM_001017929.2	NM_001017929.2		143162	110346441	NM_001017929.2	FRMPD2	NP_001017929.1	ILMN_1658081	0000380593	I	1773	GGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTC	10	-	49364666-49364715	10q11.22c-q11.22d	Homo sapiens FERM and PDZ domain containing 2 (FRMPD2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PDZD5C; MGC90186; MGC35285; MGC87776; PDZK5C; MGC87777	MGC35285; MGC87776; PDZK5C; MGC90186; MGC87777
Homo sapiens	RefSeq	NM_001017929.1	ILMN_10861	FRMPD2	NM_001017929.2	NM_001017929.2		143162	110346441	NM_001017929.2	FRMPD2	NP_001017929.1	ILMN_1710203	0002190523	I	30	GCTCAGTGGAGAATACAATCTAAACGAACAGGTGAATACAGAAGACAGTG	10	-	49384105-49384154	10q11.22c-q11.22d	Homo sapiens FERM and PDZ domain containing 2 (FRMPD2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PDZD5C; MGC90186; MGC35285; MGC87776; PDZK5C; MGC87777	MGC35285; MGC87776; PDZK5C; MGC90186; MGC87777
Homo sapiens	RefSeq	XM_937471.1	ILMN_10861	FRMPD2	NM_001017929.2	NM_001017929.2		143162	110346441	NM_001017929.2	FRMPD2	NP_001017929.1	ILMN_1661282	0006520372	A	666	GAAGTCACGCTCCTCCTTTGCCGACCCCCTCCAGGTGCGCTGCCTGAGCT	10	-	49376653-49376702	10q11.22c-q11.22d	Homo sapiens FERM and PDZ domain containing 2 (FRMPD2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PDZD5C; MGC90186; MGC35285; MGC87776; PDZK5C; MGC87777	
Homo sapiens	RefSeq	NM_001136232.1	ILMN_370457	SEC13	NM_001136232.1	NM_001136232.1		6396	210032389	NM_001136232.1	SEC13	NP_001129704.1	ILMN_3223181	0001580017	A	865	AGCTGCTCCCAGGATGGTCGTGTGTTCATTTGGACCTGTGATGATGCCTC	3	-	10345818-10345856:10346717-10346727	3p25.3b	Homo sapiens SEC13 homolog (S. cerevisiae) (SEC13), transcript variant 2, mRNA.		The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 7987303] [evidence NAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 11252894] [evidence EXP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_005529.3	ILMN_734	HSPG2	NM_005529.5	NM_005529.5		3339	140972288	NM_005529.5	HSPG2	NP_005520.4	ILMN_1787548	0005050706	S	12540	TCCCTGGCTTCTCTGGCCCACGCTGCCAACAAGGCTCTGGACATGGCATA	1	-	22151210-22151259	1p36.12b-p36.12a	Homo sapiens heparan sulfate proteoglycan 2 (HSPG2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11956183] [evidence IPI]	SJA; SJS; PRCAN; SJS1; PLC	SJS; SJS1; SJA; PLC
Homo sapiens	RefSeq	NM_000698.2	ILMN_2997	ALOX5	NM_000698.2	NM_000698.2		240	62912458	NM_000698.2	ALOX5	NP_000689.1	ILMN_1792150	0002510037	I	1	GCCAGGGACCAGTGGTGGGAGGAGGCTGCGGCGCTAGATGCGGACACCTG	10	+	45189635-45189684	10q11.21d	Homo sapiens arachidonate 5-lipoxygenase (ALOX5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: arachidonate + O2 = (6E,8Z,11Z,14Z)-(5S)-5-hydroperoxycosa-6,8,11,14-tetraenoate [goid 4051] [pmid 2829172] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11785969] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11297527] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11785969] [evidence IPI]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	5LPG; MGC163204; LOG5; 5-LO	5LPG; MGC163204; LOG5; 5-LO
Homo sapiens	RefSeq	NM_006586.2	ILMN_25587	CNPY3	NM_006586.3	NM_006586.3		10695	145587105	NM_006586.3	CNPY3	NP_006577.2	ILMN_1812967	0000240025	A	1610	AGACCAAACTCACCATCCCTCAGTCCTCCCCAACAGGGTACTAGGACTGC	6	+	42906853-42906902	6p21.1d	Homo sapiens canopy 3 homolog (zebrafish) (CNPY3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	PRAT4A; TNRC5; CAG4A; ERDA5	CAG4A; ERDA5; PRAT4A
Homo sapiens	RefSeq	NM_006586.2	ILMN_25587	CNPY3	NM_006586.3	NM_006586.3		10695	145587105	NM_006586.3	CNPY3	NP_006577.2	ILMN_1669674	0000010187	I	637	TTGAGGAAACCGGCAAGACCAAGGAGGTGATTGGCACGGGCTATGGCATC	6	+	42902249-42902298	6p21.1d	Homo sapiens canopy 3 homolog (zebrafish) (CNPY3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	PRAT4A; TNRC5; CAG4A; ERDA5	CAG4A; ERDA5; PRAT4A
Homo sapiens	RefSeq	XM_001720504.1	ILMN_345906	LOC100134172	XM_001720504.1	XM_001720504.1		100134172	169217827	XM_001720504.1	LOC100134172	XP_001720556.1	ILMN_3244405	0003120630	S	869	CCTCCCAGAGTGCTGGGATTACAGTTGTGAGCCACTGTGCCTGGTCTTTC					PREDICTED: Homo sapiens hypothetical protein LOC100134172 (LOC100134172), mRNA.					
Homo sapiens	RefSeq	NM_021144.2	ILMN_6275	PSIP1	NM_021144.2	NM_021144.2		11168	16945969	NM_021144.2	PSIP1	NP_066967.2	ILMN_1679319	0000160332	A	989	AGGCCAACATGAGAAAGAAGCAGCAGATCGAAAACGCAAGCAAGAGGAAC	9	-	15462632-15462681	9p22.3b	Homo sapiens PC4 and SFRS1 interacting protein 1 (PSIP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15479846] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12228227] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The molecular events that lead to the integration of a viral genome into the host genome [goid 19047] [pmid 16291214] [evidence EXP]; The set of processes involved in the start of virus infection of cells [goid 19059] [pmid 12091904] [evidence EXP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC74712; PAIP; LEDGF; p75; PSIP2; p52; DFS70	MGC74712; PAIP; LEDGF; p75; PSIP2; p52; DFS70
Homo sapiens	RefSeq	NM_145169.1	ILMN_5727	SFT2D1	NM_145169.1	NM_145169.1		113402	21553316	NM_145169.1	SFT2D1	NP_660152.1	ILMN_1734895	0005360521	S	362	CCCTGTGTGCTGCTCTTTGGTGGCATAAGAAGGGACTGGCTGTGTTATTC	6	-	166738045-166738083:166739620-166739630	6q27c	Homo sapiens SFT2 domain containing 1 (SFT2D1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		MGC19825; C6orf83; pRGR1	MGC19825; C6orf83; pRGR1
Homo sapiens	Unigene	Hs.463736	ILMN_94524	HS.463736	Hs.463736		Hs.463736		13711845	BG190158			ILMN_1879983	0006350102	S	6	CAGGGCCTCAGGGGATGCCAAATTCCAGGGTCCAGAAAGAGCTGGGGATA	17_random	-	57708677-57708726		RST9214 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XR_036952.1	ILMN_348796	LOC644563	XR_036952.1	XR_036952.1		644563	169217190	XR_036952.1	LOC644563		ILMN_3291685	0006560139	M	59	GTCAGCTGGTTAACAATGGTTACGAGGGGCTGAAGACTCCAGTGCCTAAC				Xq22.3b	PREDICTED: Homo sapiens misc_RNA (LOC644563), miscRNA.					
Homo sapiens	RefSeq	NM_014373.1	ILMN_931	GPR160	NM_014373.1	NM_014373.1		26996	7657135	NM_014373.1	GPR160	NP_055188.1	ILMN_1662846	0007510367	S	1437	TGCCCCCTGACTGATAGCATTTCAGAATGTGTCTTTTGAAGGGCTATACC	3	+	171285570-171285619	3q26.2b	Homo sapiens G protein-coupled receptor 160 (GPR160), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	GPCR1; GPCR150	GPCR150; GPCR1
Homo sapiens	RefSeq	NM_175840.1	ILMN_14642	SMOX	NM_175840.1	NM_175840.1		54498	28559075	NM_175840.1	SMOX	NP_787034.1	ILMN_2367258	0003710553	A	1814	ATCTTCTGTAGAGCTAGCCGCCCTGACTGCCTTCAGACCTGGCCCTGTAG	20	+	4116158-4116207	20p13b	Homo sapiens spermine oxidase (SMOX), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]	PAO; PAOh1; dJ779E11.1; SMO; MGC1010; C20orf16; FLJ20746	PAO; PAOh1; dJ779E11.1; SMO; MGC1010; C20orf16; FLJ20746
Homo sapiens	RefSeq	XM_001715089.1	ILMN_352800	LOC100134769	XM_001715089.1	XM_001715089.1		100134769	169170426	XM_001715089.1	LOC100134769	XP_001715141.1	ILMN_3249384	0001470438	S	246	GGCAGCCAAACACCCAGTTACATGTTCTCATTTCAACCAAGACCTTCAGC	7	+	63012064-63012080:63017286-63017318		PREDICTED: Homo sapiens similar to Zinc finger protein 679 (LOC100134769), mRNA.					
Homo sapiens	RefSeq	NM_001449.3	ILMN_7975	FHL1	NM_001449.3	NM_001449.3		2273	34147646	NM_001449.3	FHL1	NP_001440.2	ILMN_1805842	0004640446	S	1967	CTAGAGGGGGAGTTGAGCAGGCGCCAGGGCTGTCATCAACATGGATATGA	X	+	135120766-135120815	Xq26.3b	Homo sapiens four and a half LIM domains 1 (FHL1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 7626119] [evidence NAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 7626119] [evidence NAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KYO-T; SLIM1; MGC111107; XMPMA; FHL1B; bA535K18.1	KYO-T; SLIM1; MGC111107; XMPMA; FHL1B; bA535K18.1
Homo sapiens	RefSeq	NM_003087.1	ILMN_3755	SNCG	NM_003087.1	NM_003087.1		6623	4507112	NM_003087.1	SNCG	NP_003078.1	ILMN_1653161	0007000669	S	262	AGCAGCGTCAACACTGTGGCCACCAAGACCGTGGAGGAGGCGGAGAACAT	10	+	88709796-88709845	10q23.2a	Homo sapiens synuclein, gamma (breast cancer-specific protein 1) (SNCG), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	BCSG1; SR	BCSG1; SR
Homo sapiens	RefSeq	NM_001005486.1	ILMN_13694	OR4K15	NM_001005486.1	NM_001005486.1		81127	53828735	NM_001005486.1	OR4K15	NP_001005486.1	ILMN_1761294	0002600121	S	482	GCCGTCGTGTATGTGTTGTGCTCGTCCTCATTTCATGGTTTGTGGGCTTC	14	+	19513999-19514048	14q11.2a	Homo sapiens olfactory receptor, family 4, subfamily K, member 15 (OR4K15), mRNA.				OR4K15Q; OR14-20	OR4K15Q; OR14-20
Homo sapiens	Unigene	Hs.542803	ILMN_106524	HS.542803	Hs.542803		Hs.542803		5753955	AI961242			ILMN_1854361	0002570735	S	327	AGTGACTGGATGGGGAACGTGCAGCAACAAACACTCGTGCACTCAGACCC	3	-	198046703-198046752		wt15d12.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2507543 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014868.3	ILMN_181600	RNF10	NM_014868.3	NM_014868.3		9921	34452680	NM_014868.3	RNF10	NP_055683.3	ILMN_1697529	0006760291	S	3536	GGAAAGCTGTAACTCACGAAGCCCTGAGACCTGCTACCCCTAAGATCGAG	12	+	119499492-119499541	12q24.31a	Homo sapiens ring finger protein 10 (RNF10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16335786] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 16335786] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16335786] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126758; MGC126764; RIE2; KIAA0262	MGC126758; MGC126764; RIE2; KIAA0262
Homo sapiens	RefSeq	NR_030354.1	ILMN_388116	MIR624	NR_030354.1	NR_030354.1		693209	262206113	NR_030354.1	MIR624		ILMN_3308673	0001850026	S	10	CAAGGTAGTACCAGTACCTTGTGTTCAGTGGAACCAAGGTAAACACAAGG				14q12e	Homo sapiens microRNA 624 (MIR624), microRNA.					
Homo sapiens	RefSeq	NM_020238.1	ILMN_1299	INCENP	NM_020238.1	NM_020238.1		3619	9910375	NM_020238.1	INCENP	NP_064623.1	ILMN_1698171	0001050593	S	3435	CCCTACCCTCTCCATTCCCCAGGCTCCACCCGTGCTGCTCAAGTGCAAAT	11	+	61676714-61676763	11q12.3a	Homo sapiens inner centromere protein antigens 135/155kDa (INCENP), mRNA.	A structural unit of the synaptonemal complex found between the lateral elements [goid 801] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [pmid 9864353] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 9864353] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16239925] [evidence IDA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 16239925] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 16239925] [evidence IMP]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9864353] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16239925] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14610074] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16239925] [evidence IPI]	FLJ31633; MGC111393	FLJ31633; MGC111393
Homo sapiens	RefSeq	XM_930029.1	ILMN_32596	LOC647037	XM_930029.1	XM_930029.1		647037	89038498	XM_930029.1	LOC647037	XP_935122.1	ILMN_1761922	0005700709	S	75	CAAGAAGGCTCAAGGTCCCAAAGGTGGTGGCAATGAAGTAAAGGTCACAC	15	-	80089879-80089928	15q25.2a	PREDICTED: Homo sapiens similar to Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (Rotamase Pin4) (PPIase Pin4) (Parvulin 14) (Par14) (Peptidyl-prolyl cis/trans isomerase EPVH) (hPar14) (LOC647037), mRNA.					
Homo sapiens	RefSeq	XM_001720344.1	ILMN_335042	LOC340239	XM_001720344.1	XM_001720344.1		340239	169172311	XM_001720344.1	LOC340239	XP_001720396.1	ILMN_3199157	0000160187	A	241	GGCAGGAGTAGTTTTAGCCGCTTCCGGCCGTTGATCGCAGGCGATCAACT				7q11.21b	PREDICTED: Homo sapiens hypothetical protein LOC340239, transcript variant 2 (LOC340239), mRNA.					
Homo sapiens	RefSeq	NM_014226.1	ILMN_5109	RAGE	NM_014226.1	NM_014226.1		5891	7657497	NM_014226.1	RAGE	NP_055041.1	ILMN_1745282	0001470348	S	1782	CGAGCAGGCATTTCTGTGATGTGTTGGGCGTGGTTGGAAGGTGGGTTCTG	14	-	102695280-102695329	14q32.31c	Homo sapiens renal tumor antigen (RAGE), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10421840] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10421840] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10421840] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17587138] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MOK; RAGE1	MOK; RAGE1
Homo sapiens	RefSeq	NM_175861.1	ILMN_1611	TMTC1	NM_175861.2	NM_175861.2		83857	83415183	NM_175861.2	TMTC1	NP_787057.2	ILMN_1699251	0000060347	I	857	CCCTTTCCAACAAGCAAGACAAGTCGAGCAATGGGGCCCTCTGTCCACGC	12	-	29904780-29904805:29908642-29908665	12p11.22a	Homo sapiens transmembrane and tetratricopeptide repeat containing 1 (TMTC1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	OLF; FLJ41625; FLJ31400; ARG99	OLF
Homo sapiens	RefSeq	XM_928461.1	ILMN_1611	TMTC1	NM_175861.2	NM_175861.2		83857	83415183	NM_175861.2	TMTC1	NP_787057.2	ILMN_1811426	0005310280	S	8166	CCTTACCTGGGGCAAGTTAGCCATTGTCTCCCAGTCATGTTTACCACCCA	12	-	29655640-29655689	12p11.22a	Homo sapiens transmembrane and tetratricopeptide repeat containing 1 (TMTC1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	OLF; FLJ41625; FLJ31400; ARG99	
Homo sapiens	Unigene	Hs.582068	ILMN_134249	HS.582068	Hs.582068		Hs.582068		32050055	BX509986			ILMN_1854348	0003710692	S	508	CGGCTACTGAAATAGGCTGAGAGAGGGTGAAGAAACTGAGGCTTGGAGGG	4	+	129443623-129443639:129600932-129600964		DKFZp686F158_r1 686 (synonym: hlcc3) Homo sapiens cDNA clone DKFZp686F158 5, mRNA sequence					
Homo sapiens	RefSeq	NR_002985.1	ILMN_174273	SNORA58	NR_002985.1	NR_002985.1		677836	91680850	NR_002985.1	SNORA58		ILMN_3242067	0003850646	S	38	CCAGGCAGGGGGGACAGTGTATGCAAGAATAATTTGGAGTTCCTGCCAGC	3	-	132680680-132680729	3q22.1b	Homo sapiens small nucleolar RNA, H/ACA box 58 (SNORA58), small nucleolar RNA.				ACA58	ACA58
Homo sapiens	RefSeq	XM_935951.1	ILMN_38924	LOC641931	XM_935951.1	XM_935951.1		641931	89027676	XM_935951.1	LOC641931	XP_941044.1	ILMN_1662164	0001990192	S	82	CAGGCCTGCCCGACCCAGGGTCCGGGGGACCCCACTCTCCGTCCCGCCGG					PREDICTED: Homo sapiens hypothetical LOC641931 (LOC641931), mRNA.					
Homo sapiens	RefSeq	NM_138352.1	ILMN_12112	SAMD1	NM_138352.1	NM_138352.1		90378	39930516	NM_138352.1	SAMD1	NP_612361.1	ILMN_1658821	0001440438	S	1566	GCTTCAGCAAGGCCACTTTGAGGATGATGACCCCGATGGCTTCTTAGGCT	19	-	14061916-14061965	19p13.12c	Homo sapiens sterile alpha motif domain containing 1 (SAMD1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	XM_929030.3	ILMN_31418	LOC161527	XM_929030.3	XM_929030.3		161527	169208468	XM_929030.3	LOC161527	XP_934123.3	ILMN_3251600	0003890369	S	7121	CACCTCTTGCTTGGAGAGCCCCATCCAACAGCCACCAGGCCTGATAGAGA	15	+	82707644-82707693	15q25.2b	PREDICTED: Homo sapiens hypothetical protein LOC161527, transcript variant 1 (LOC161527), mRNA.					
Homo sapiens	RefSeq	NM_000224.2	ILMN_22543	KRT18	NM_000224.2	NM_000224.2		3875	40354193	NM_000224.2	KRT18	NP_000215.1	ILMN_1803408	0000110431	I	31	ATATAACTCGGGTCGCGCGGCTCGCGCAGGCCGCCACCGTCGTCCGCAAA	12	+	51629140-51629189	12q13.13e	Homo sapiens keratin 18 (KRT18), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16424149] [evidence IDA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [pmid 18000879] [evidence IDA]; A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; cetriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome [goid 34451] [pmid 18000879] [evidence IDA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [pmid 16424149] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 2434380] [evidence TAS]; A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [evidence IEA]; The directed movement of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane [goid 43000] [pmid 15529338] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 11684708] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10954706] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11684708] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10954706] [evidence IPI]	K18; CYK18	K18; CYK18
Homo sapiens	RefSeq	XM_001719715.1	ILMN_348723	LOC100133866	XM_001719715.1	XM_001719715.1		100133866	169217697	XM_001719715.1	LOC100133866	XP_001719767.1	ILMN_3246538	0003520044	S	827	TGAATGTGGTGATTTCCCAGATACCATCTCAGGCTTAACCTAGCACATCC					PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein (myomegalin) (LOC100133866), mRNA.					
Homo sapiens	RefSeq	XR_037461.1	ILMN_335786	LOC100132310	XR_037461.1	XR_037461.1		100132310	169171971	XR_037461.1	LOC100132310		ILMN_3200101	0002360068	A	89	GTCTCAGAGATCAGAGGCTTGAAGAAAGGGATAGATTAAAACCTAAAAAG				7q34b	PREDICTED: Homo sapiens misc_RNA (LOC100132310), miscRNA.					
Homo sapiens	RefSeq	NM_024562.1	ILMN_309716	TMCO7	NM_024562.1	NM_024562.1		79613	153791501	NM_024562.1	TMCO7	NP_078838.1	ILMN_3237721	0006330437	S	4408	CACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAA	16	+	67676176-67676225	16q22.1d	Homo sapiens transmembrane and coiled-coil domains 7 (TMCO7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ12688; KIAA1746	FLJ12688; KIAA1746
Homo sapiens	RefSeq	NM_002659.2	ILMN_24906	PLAUR	NM_002659.2	NM_002659.2		5329	53829377	NM_002659.2	PLAUR	NP_002650.1	ILMN_2408543	0000730528	A	637	AGTGCCGCAGCCCTGAAGAACAGTGCCTGGATGTGGTGACCCACTGGATC	19	-	48852486-48852535	19q13.31a	Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2544876] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10749881] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1689240] [evidence NAS]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [pmid 8049431] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 1689240] [evidence NAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10749881] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10749881] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 8392005] [evidence NAS]; A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [pmid 1846368] [evidence EXP]; Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [pmid 1689240] [evidence NAS]	Interacting selectively with any enzyme [goid 19899] [pmid 14688365] [evidence IPI];  [goid 30377] [pmid 1689240] [evidence NAS];  [goid 30377] [pmid 8392005] [evidence NAS]	UPAR; URKR; CD87	CD87; UPAR; URKR
Homo sapiens	RefSeq	NM_015027.2	ILMN_365507	PDXDC1	NM_015027.2	NM_015027.2		23042	190341073	NM_015027.2	PDXDC1	NP_055842.2	ILMN_3243705	0004590725	S	3621	GGCCCCTGTGCCTTCTTAATCCAGCAGTCAAGCTTTTGGGAGACCTGAAA	16	+	15131162-15131211	16p13.11b	Homo sapiens pyridoxal-dependent decarboxylase domain containing 1 (PDXDC1), mRNA.		The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]		
Homo sapiens	RefSeq	NR_002780.1	ILMN_14807	HIGD2B	NR_002780.1	NR_002780.1		123346	84872067	NR_002780.1	HIGD2B		ILMN_2051563	0001940468	S	325	CGCCTTAGCTACTGAGGTCAAACCTGAAATAGGCTGTAGACTCCACCAGC	15	-	72972492-72972534:72978159-72978165	15q24.1a	Homo sapiens HIG1 hypoxia inducible domain family, member 2B (pseudogene) (HIGD2B), non-coding RNA.					
Homo sapiens	RefSeq	XR_000594.1	ILMN_14807	HIGD2B	NR_002780.1	NR_002780.1		123346	84872067	NR_002780.1	HIGD2B		ILMN_1711021	0001010286	A	721	GCTTCCACCAGGGCAACAGCCAATGTTCACGGCTTATGATGCACACCCAG	15	-	72968469-72968518	15q24.1a	Homo sapiens HIG1 hypoxia inducible domain family, member 2B (pseudogene) (HIGD2B), non-coding RNA.					
Homo sapiens	RefSeq	XM_001716419.1	ILMN_334259	LOC100133558	XM_001716419.1	XM_001716419.1		100133558	169167998	XM_001716419.1	LOC100133558	XP_001716471.1	ILMN_3235126	0006060176	S	61	CTCAAAGGCCAGAAAGAAGTAGCAGATGGCACAGTTAGCTGGGATCTAGA					PREDICTED: Homo sapiens similar to hCG1642170 (LOC100133558), mRNA.					
Homo sapiens	RefSeq	NM_173558.2	ILMN_13097	FGD2	NM_173558.2	NM_173558.2		221472	34222232	NM_173558.2	FGD2	NP_775829.1	ILMN_2115005	0007210717	S	2993	AGAGAGCAAACTACCACAACCAATGGTTGAGCCCCTGTCAAGTGCCAGTC	6	+	37104771-37104820	6p21.2c	Homo sapiens FYVE, RhoGEF and PH domain containing 2 (FGD2), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence ISS]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the activity of the GTPase Cdc42 [goid 43088] [evidence ISS]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence ISS]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a small monomeric GTPase [goid 31267] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC71330; ZFYVE4	MGC71330; ZFYVE4
Homo sapiens	RefSeq	NM_173558.2	ILMN_13097	FGD2	NM_173558.2	NM_173558.2		221472	34222232	NM_173558.2	FGD2	NP_775829.1	ILMN_2115011	0003140400	S	2737	CCTCAGCCTCCCAAGTAGCTGGGATTATAGGTGTGTGCCACTGTGCCAAG	6	+	37104515-37104564	6p21.2c	Homo sapiens FYVE, RhoGEF and PH domain containing 2 (FGD2), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence ISS]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the activity of the GTPase Cdc42 [goid 43088] [evidence ISS]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence ISS]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a small monomeric GTPase [goid 31267] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC71330; ZFYVE4	MGC71330; ZFYVE4
Homo sapiens	RefSeq	NM_004256.1	ILMN_24138	SLC22A13	NM_004256.1	NM_004256.1		9390	4758851	NM_004256.1	SLC22A13	NP_004247.1	ILMN_1777665	0001470754	S	2167	GATTCCTTCTAGCGGATGGACCAGATTCCTCTGGCTAACGTATGGCCCCA	3	+	38294450-38294499	3p22.2a	Homo sapiens solute carrier family 22 (organic cation transporter), member 13 (SLC22A13), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10072596] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of organic cations into, out of, within or between cells. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage [goid 15695] [pmid 10072596] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [pmid 10072596] [evidence NAS]	OCTL1; ORCTL3; OCTL3	OCTL1; ORCTL3; OCTL3
Homo sapiens	Unigene	Hs.27048	ILMN_72079	HS.27048	Hs.27048		Hs.27048		16551677	AK056312			ILMN_1852384	0005220086	S	1620	GAGCACCTGCCCCCTTGTAGCTTGAGTTCCTTTTGGTAACAGTAGCAGCC	12	+	1475095-1475144		Homo sapiens cDNA FLJ31750 fis, clone NT2RI2007406					
Homo sapiens	RefSeq	NM_005762.2	ILMN_6866	TRIM28	NM_005762.2	NM_005762.2		10155	14971416	NM_005762.2	TRIM28	NP_005753.1	ILMN_1736575	0003890600	S	2536	GAAGTTGTCACCTCCCTACAGCTCCCCACAGGAGTTTGCCCAGGATGTGG	19	+	59061567-59061616	19q13.43c	Homo sapiens tripartite motif-containing 28 (TRIM28), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8769649] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8769649] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10330177] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10330177] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ29029; TIF1B; RNF96; TF1B; KAP1	FLJ29029; TIF1B; RNF96; TF1B; KAP1
Homo sapiens	RefSeq	NM_020359.1	ILMN_9444	PLSCR2	NM_020359.1	NM_020359.1		57047	9966794	NM_020359.1	PLSCR2	NP_065092.1	ILMN_1763279	0004670338	S	236	TCTACCCAGGACGTCAGCATGACTACCTAGTCCCACCTGCTGGCACAGCT	3	-	147660429-147660478	3q24d	Homo sapiens phospholipid scramblase 2 (PLSCR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10930526] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which all major lipid classes are redistributed within the plasma membrane following cell activation or injury, resulting in surface exposure of phosphatidylserine (PS) and phosphatidylethanolamine (PE). Cell surface-exposed PS can serve as receptor sites for coagulation enzyme complexes, and contributes to cell clearance by the reticuloendothelial system [goid 17121] [pmid 10930526] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10930526] [evidence NAS];  [goid 17128] [pmid 10930526] [evidence NAS]		
Homo sapiens	RefSeq	NM_145290.2	ILMN_18428	GPR125	NM_145290.2	NM_145290.2		166647	59823630	NM_145290.2	GPR125	NP_660333.2	ILMN_1674181	0005260369	I	78	GCTCCCTAGAGGCCCAGCGCAGCCGCAGCGGACAAAGGAGCATGTCCGCG	4	-	22517545-22517594	4p15.31b	Homo sapiens G protein-coupled receptor 125 (GPR125), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TEM5L; PGR21	TEM5L; PGR21
Homo sapiens	RefSeq	NM_017533.1	ILMN_16013	MYH4	NM_017533.2	NM_017533.2		4622	110611902	NM_017533.2	MYH4	NP_060003.2	ILMN_1729251	0003990577	S	5781	GGAACAATCCAATGTCAACCTTGCCAAGTTCCGCAAGCTCCAGCACGAGC	17	-	10346792-10346841	17p13.1a	Homo sapiens myosin, heavy chain 4, skeletal muscle (MYH4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [pmid 10388558] [evidence NAS]; The sliding of actin thin filaments and myosin thick filaments past each other in muscle contraction. This involves a process of interaction of myosin located on a thick filament with actin located on a thin filament. During this process ATP is split and forces are generated [goid 30049] [pmid 3904738] [evidence NAS]	Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [pmid 10388558] [evidence NAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 3904738] [evidence NAS]	MYH2B; MyHC-IIb; MyHC-2B	MYH2B; MyHC-IIb; MyHC-2B
Homo sapiens	RefSeq	NM_152317.1	ILMN_138709	DEPDC4	NM_152317.1	NM_152317.1		120863	22748694	NM_152317.1	DEPDC4	NP_689530.1	ILMN_1777333	0005960753	S	1960	CTGCAGAGGCGAAAGCCAGTGCTTTGGTAAAGGTCCTAGTCTTTCTGGCT	12	-	99121905-99121954	12q23.1d	Homo sapiens DEP domain containing 4 (DEPDC4), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		FLJ33505; DEP.4	FLJ33505; DEP.4
Homo sapiens	RefSeq	NM_004853.1	ILMN_9761	STX8	NM_004853.1	NM_004853.1		9482	4759187	NM_004853.1	STX8	NP_004844.1	ILMN_1752895	0003130379	S	534	GCCAGAGGAGACCAGAGGCTTGGGTTTTGATGAAATCCGGCAACAGCAGC	17	-	9419890-9419939	17p13.1b	Homo sapiens syntaxin 8 (STX8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9852078] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10198254] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 10198254] [evidence TAS]		CARB	CARB
Homo sapiens	Unigene	Hs.529633	ILMN_101315	HS.529633	Hs.529633		Hs.529633		20397714	BQ216314			ILMN_1824151	0004200040	S	182	CACTGCACATGTAGAAATGGGCTTGGCCTGGGTCAGGGCATTGAGATTGG	1	+	120711066-120711115		AGENCOURT_7549809 NIH_MGC_68 Homo sapiens cDNA clone IMAGE:6057678 5, mRNA sequence					
Homo sapiens	RefSeq	NM_015488.3	ILMN_182449	PNKD	NM_015488.4	NM_015488.4		25953	116642886	NM_015488.4	PNKD	NP_056303.3	ILMN_1711810	0006400128	I	284	CAGAGGGCAAGGAGGAACCTGAACCCCTATCCCCGGAGCTGGAATACATT	2	+	218844420-218844469	2q35e	Homo sapiens paroxysmal nonkinesigenic dyskinesia (PNKD), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC31943; DYT8; FKSG19; KIPP1184; MR1; DKFZp564N1362; KIAA1184; FPD1; BRP17; MR-1; TAHCCP2; PDC	FKSG19; KIPP1184; DKFZp564N1362; MR1; FPD1; TAHCCP2; MGC31943; DYT8; KIAA1184; BRP17; MR-1; PDC
Homo sapiens	RefSeq	XM_001719265.1	ILMN_341179	LOC643802	XM_001719265.1	XM_001719265.1		643802	169210050	XM_001719265.1	LOC643802	XP_001719317.1	ILMN_3283141	0003780356	M	165	GGAGGAAGAGGAAGTGTCAGATATGGGTGGTGACAATCCTGAAGTGGGCA	16	-	51962374-51962423	16q12.2a	PREDICTED: Homo sapiens similar to M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) (LOC643802), mRNA.					
Homo sapiens	RefSeq	XM_001719265.1	ILMN_341179	LOC643802	XM_001719265.1	XM_001719265.1		643802	169210050	XM_001719265.1	LOC643802	XP_001719317.1	ILMN_3206632	0003290544	A	58	GACCCCTGGCAAATTGTGGAGCTGGGGGAAGAGAGTGAAGAACAGGAGTG	16	-	51962481-51962500:51964319-51964348	16q12.2a	PREDICTED: Homo sapiens similar to M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) (LOC643802), mRNA.					
Homo sapiens	Unigene	Hs.390250	ILMN_89362	HS.390250	Hs.390250		Hs.390250		10724610	AV707343			ILMN_1851540	0001030626	S	541	GCACGTGTTCCTTCAGTACTTTGGTGATTTTTATCCCCCTTGTGATGCAC	3	-	193340451-193340470:193340473-193340502		AV707343 ADB Homo sapiens cDNA clone ADBBSH02 5, mRNA sequence					
Homo sapiens	RefSeq	NM_017855.2	ILMN_11065	ODAM	NM_017855.3	NM_017855.3		54959	109134337	NM_017855.3	ODAM	NP_060325.3	ILMN_1729851	0004570044	S	715	GACATGACAGTGCAGGAGTTTTCATGCCCTCAACTTCACCAAAACCCAGC	4	+	71068522-71068571	4q13.3a	Homo sapiens odontogenic, ameloblast asssociated (ODAM), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]		APIN; FLJ20513	FLJ20513
Homo sapiens	RefSeq	XM_001716021.1	ILMN_340258	LOC100129307	XM_001716021.1	XM_001716021.1		100129307	169206251	XM_001716021.1	LOC100129307	XP_001716073.1	ILMN_3259213	0001510754	M	1036	AAAGCTGCCGGCCACAGGTCCCACAAAAGAAAACTGTCGGGGCCACCACT				13q22.3b	PREDICTED: Homo sapiens hypothetical protein LOC100129307 (LOC100129307), mRNA.					
Homo sapiens	RefSeq	NM_130771.2	ILMN_3784	OSCAR	NM_130771.3	NM_130771.3		126014	150417963	NM_130771.3	OSCAR	NP_570127.2	ILMN_1741917	0000150762	A	983	AACGGTCCTTAGACCCCGCTGTGCCCTGTGCTGTAGCTTCTTTCCAGGCC	19	-	59290134-59290183	19q13.42a	Homo sapiens osteoclast associated, immunoglobulin-like receptor (OSCAR), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC33613; PIGR3	MGC33613; PIGR3
Homo sapiens	RefSeq	NM_006175.3	ILMN_19725	NRAP	NM_006175.3	NM_006175.3		4892	46049091	NM_006175.3	NRAP	NP_006166.3	ILMN_2312587	0000110646	A	4976	CCTCAGGCATGCTCAGAAGGCCCACCAGCTGCAGAGTGATGTCAAGTATA	10	-	115379343-115379392	10q25.3a	Homo sapiens nebulin-related anchoring protein (NRAP), transcript variant 1, mRNA.	An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence ISS]; Terminal anchorage site of skeletal muscle cells to tendons; a specialised type of contact between the cell and the extracellular matrix in skeletal muscle [goid 5927] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence ISS]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 9339382] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc [goid 51371] [evidence ISS]		
Homo sapiens	RefSeq	NM_020949.1	ILMN_24388	SLC7A14	NM_020949.1	NM_020949.1		57709	55925605	NM_020949.1	SLC7A14	NP_066000.1	ILMN_1676602	0006100717	S	2784	TCAGGATAGTTCTGTTGAAGGGCTTAACCTGGGTCCCCTAACTGGTCGCC	3	-	171667330-171667379	3q26.2c	Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 (SLC7A14), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]	KIAA1613	KIAA1613
Homo sapiens	Unigene	Hs.575829	ILMN_128010	HS.575829	Hs.575829		Hs.575829		81184468	DA691010			ILMN_1874770	0000450768	S	464	TCTTCAGAGAGAAGGGAGGGACCAGCCACAGAGGAGGCATGATCCAAACT	1	-	207559132-207559181		DA691010 NT2NE2 Homo sapiens cDNA clone NT2NE2010580 5, mRNA sequence					
Homo sapiens	RefSeq	XM_934514.1	ILMN_44257	LOC644714	XM_945782.2	XM_945782.2		644714	113414974	XM_945782.2	LOC644714	XP_950875.1	ILMN_1658748	0001770184	A	481	ATGACGGCGCTTGAGGGTGACCAGACCTCCTCAATCATTCCATCAGCCAC				3p21.31j	PREDICTED: Homo sapiens hypothetical protein LOC644714, transcript variant 1 (LOC644714), mRNA.					
Homo sapiens	RefSeq	XM_934516.1	ILMN_44257	LOC644714	XM_945782.2	XM_945782.2		644714	113414974	XM_945782.2	LOC644714	XP_950875.1	ILMN_1752415	0005390097	I	1492	ATTTACCCCCCTGCCACGCCCCACACTGAGCTGGATGATTTGATGGGAAG				3p21.31j	PREDICTED: Homo sapiens hypothetical protein LOC644714, transcript variant 1 (LOC644714), mRNA.					
Homo sapiens	RefSeq	XM_001732887.1	ILMN_353198	LOC731605	XM_001732887.1	XM_001732887.1		731605	169210232	XM_001732887.1	LOC731605	XP_001732939.1	ILMN_3230286	0000460563	A	2678	GGCAGAGGGCGCTTTAACTTCAAAAAATCAGGTAGCAGTCCTAAATGGAA					PREDICTED: Homo sapiens hypothetical LOC731605 (LOC731605), mRNA.					
Homo sapiens	RefSeq	XM_929918.1	ILMN_6974	EEF1B2	NM_021121.3	NM_021121.3		1933	83376128	NM_021121.3	EEF1B2	NP_066944.1	ILMN_1675541	0007610706	S	421	CTTTGGATCTGATGATGAGGAGGAAAGTGAAGAAGCAAAGAGGCTAAGGG	2	+	206734420-206734441:206735007-206735034	2q33.3b	Homo sapiens eukaryotic translation elongation factor 1 beta 2 (EEF1B2), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10368288] [evidence EXP]; A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [pmid 1886777] [evidence NAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 1886777] [evidence NAS]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [pmid 1886777] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]	EEF1B; EF1B; EEF1B1	
Homo sapiens	RefSeq	NM_017679.2	ILMN_8987	BCAS3	NM_017679.2	NM_017679.2		54828	22095352	NM_017679.2	BCAS3	NP_060149.2	ILMN_2054510	0004830687	S	3172	TCCACCTGGCCATTTTGACCCTGAGTGGACAGTCACAGCCTCAGCTCATG	17	+	56824650-56824699	17q23.2a-q23.2b	Homo sapiens breast carcinoma amplified sequence 3 (BCAS3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FLJ20128; MGC4973; MAAB; GAOB1	FLJ20128; MGC4973; MAAB; GAOB1
Homo sapiens	RefSeq	NM_024778.4	ILMN_11634	LONRF3	NM_001031855.1	NM_001031855.1		79836	73747839	NM_001031855.1	LONRF3	NP_001027026.1	ILMN_1720452	0002450504	A	2254	GGACAGACTGAATGGTATTCGACGAGTCCTGGCCTTCATATCCCGAAACC	X	+	118035624-118035673	Xq24b	Homo sapiens LON peptidase N-terminal domain and ring finger 3 (LONRF3), transcript variant 1, mRNA.		The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC119463; MGC119465; RNF127; FLJ22612	MGC119463; MGC119465; RNF127; FLJ22612
Homo sapiens	RefSeq	NM_001031855.1	ILMN_11634	LONRF3	NM_001031855.1	NM_001031855.1		79836	73747839	NM_001031855.1	LONRF3	NP_001027026.1	ILMN_1669380	0003800377	I	1001	CTAGGCAAGGTGGAGGAGGCACTAAGGGAGTTTCTCTACTGTGTATCCCT	X	+	118000845-118000894	Xq24b	Homo sapiens LON peptidase N-terminal domain and ring finger 3 (LONRF3), transcript variant 1, mRNA.		The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC119463; MGC119465; RNF127; FLJ22612	MGC119463; MGC119465; RNF127; FLJ22612
Homo sapiens	RefSeq	NM_172016.1	ILMN_8004	TRIM39	NM_172016.1	NM_172016.1		56658	25777697	NM_172016.1	TRIM39	NP_742013.1	ILMN_2413517	0007510273	A	2834	GCTCCTCTCCAGAGGCAAAGTGGAAGAGATCCTGCAAGACACATCTATCC	6	+	30418788-30418837	6p21.33b	Homo sapiens tripartite motif-containing 39 (TRIM39), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16189514] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRIM39B; RNF23; TFP; MGC32984	TRIM39B; RNF23; TFP; MGC32984
Homo sapiens	RefSeq	NR_001566.1	ILMN_24848	TERC	NR_001566.1	NR_001566.1		7012	38176147	NR_001566.1	TERC		ILMN_1766573	0003420678	S	122	GCGGAAAAGCCTCGGCCTGCCGCCTTCCACCGTTCATTCTAGAGCAAACA	3	-	170965371-170965420	3q26.2b	Homo sapiens telomerase RNA component (TERC), telomerase RNA.				TRC3; TR; hTR; SCARNA19	TRC3; TR; hTR; SCARNA19
Homo sapiens	RefSeq	NM_031482.3	ILMN_174692	ATG10	NM_031482.3	NM_031482.3		83734	33589825	NM_031482.3	ATG10	NP_113670.1	ILMN_2206098	0005340603	S	950	GGAATTGCGGCACGAAGAATGCCAAGAGTTTACCTGGCCAGCCCTGGCTT	5	+	81585661-81585710	5q14.2a	Homo sapiens ATG10 autophagy related 10 homolog (S. cerevisiae) (ATG10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein [goid 31401] [evidence ISS]; A process by which one or more moieties of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target protein [goid 32446] [pmid 16963840] [evidence IDA]; The process by which cells digest parts of their own cytoplasm in response to the accumulation of misfolded proteins in the endoplasmic reticulum [goid 34263] [pmid 17256008] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	APG10; DKFZP586I0418; APG10L; FLJ13954; pp12616	DKFZP586I0418; pp12616; APG10; APG10L; FLJ13954
Homo sapiens	RefSeq	NM_002023.3	ILMN_29801	FMOD	NM_002023.3	NM_002023.3		2331	71040110	NM_002023.3	FMOD	NP_002014.2	ILMN_1789639	0001710484	S	2647	GGGGCAAGGACTGTTGGAGGAGAGTTAGCCCAAGTATAGGCTCTGCCCAG	1	-	203310041-203310090	1q32.1e	Homo sapiens fibromodulin (FMOD), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 8093006] [evidence TAS]	The aggregation, arrangement and bonding together of a ligand-bound type II transforming growth factor beta (TGF-beta) receptor dimer with a type I TGF-beta receptor dimer, following ligand binding, to form a heterotetrameric TGF-beta receptor complex [goid 7181] [pmid 8093006] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8093006] [evidence TAS]	SLRR2E	SLRR2E
Homo sapiens	RefSeq	NM_031469.1	ILMN_9801	SH3BGRL2	NM_031469.2	NM_031469.2		83699	141803116	NM_031469.2	SH3BGRL2	NP_113657.1	ILMN_1762764	0007200044	S	4531	CCCTGTCTGATAGAGGGAACCCCTGTACTGAACTTTGTGTTGACCATAGC	6	+	80413030-80413079	6q14.1c	Homo sapiens SH3 domain binding glutamic acid-rich protein like 2 (SH3BGRL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	FLJ90025	FLJ90025
Homo sapiens	RefSeq	NM_138633.1	ILMN_22040	AKAP7	NM_138633.1	NM_138633.1		9465	20336195	NM_138633.1	AKAP7	NP_619539.1	ILMN_2293529	0002370220	I	266	GCTCGTCCTCTGCAGTCCTACAGAGATACAGCAAGGATATACCCAGTTGG	6	+	131574189-131574238	6q23.2a	Homo sapiens A kinase (PRKA) anchor protein 7 (AKAP7), transcript variant beta, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10613906] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 10613906] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 10613906] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10613906] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 9545239] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10613906] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 9545239] [evidence IC ]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10613906] [evidence TAS]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 9545239] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10613906] [evidence IDA]	AKAP18	AKAP18
Homo sapiens	RefSeq	NM_001135629.1	ILMN_371865	KLRAQ1	NM_001135629.1	NM_001135629.1		129285	208431753	NM_001135629.1	KLRAQ1	NP_001129101.1	ILMN_3271092	0003940242	M	3041	CTGAGGGAGAGGGAGCCCTCCAAACTTCAGATCCTGTGGGTTTAGTATCA	2	+	48742396-48742445	2p16.3d	Homo sapiens KLRAQ motif containing 1 (KLRAQ1), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_014553.1	ILMN_26616	TFCP2L1	NM_014553.1	NM_014553.1		29842	7657298	NM_014553.1	TFCP2L1	NP_055368.1	ILMN_1736527	0006510240	S	4746	AGTCTTCTGAGGTCCAGCCCCTTAGGCTGTCTGTCATCACTGTACCCAAG	2	-	121695121-121695170	2q14.2e	Homo sapiens transcription factor CP2-like 1 (TFCP2L1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface [goid 2070] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [pmid 10644752] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 7028] [evidence IEA]; The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity [goid 7431] [evidence IEA]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 10644752] [evidence TAS]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IEA]; Any process that activates or increases the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45927] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10644752] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10644752] [evidence TAS]; Any activity that stops or downregulates transcription of genes globally, and is not specific to a particular gene or gene set [goid 16565] [evidence IEA]	LBP-9; LBP9; CRTR1	LBP-9; LBP9; CRTR1
Homo sapiens	RefSeq	NM_024762.2	ILMN_175059	ZNF552	NM_024762.3	NM_024762.3		79818	99028877	NM_024762.3	ZNF552	NP_079038.2	ILMN_1700563	0004060754	S	1480	CCCAAAGGTCTGCTCTCCTTGGATATTGGAGAGTTCACACTAGAGAAGAG	19	-	63011084-63011133	19q13.43c	Homo sapiens zinc finger protein 552 (ZNF552), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ21603	FLJ21603
Homo sapiens	RefSeq	NR_030347.1	ILMN_388098	MIR548C	NR_030347.1	NR_030347.1		693129	262206078	NR_030347.1	MIR548C		ILMN_3309006	0003940039	S	26	AAGTAATTGCGGTTTTTGCCATTACTTTCAGTAGCAAAAATCTCAATTAC				12q14.2b	Homo sapiens microRNA 548c (MIR548C), microRNA.					
Homo sapiens	RefSeq	XM_928046.1	ILMN_42942	LOC653554	XM_928046.1	XM_928046.1		653554	88984937	XM_928046.1	LOC653554	XP_933139.1	ILMN_1684633	0001450300	S	61	AAAGCAGTGGAGAGGACCTTGGGCGAGTGCATGACAGCAAAATTATGTCT	5	-	131219664-131219673:131221311-131221350		PREDICTED: Homo sapiens similar to acyl-CoA synthetase long-chain family member 6 (LOC653554), mRNA.					
Homo sapiens	RefSeq	NM_016042.2	ILMN_174330	EXOSC3	NM_016042.2	NM_016042.2		51010	50511942	NM_016042.2	EXOSC3	NP_057126.2	ILMN_1734194	0006130196	I	590	GAATGGGTGTCATTGGACAGGATGGTCTGCTTTTTAAAGTGACTCTGGGC	9	-	37781993-37782042	9p13.2a	Homo sapiens exosome component 3 (EXOSC3), transcript variant 1, mRNA.	Complex of 3'-5' exoribonucleases found in the nucleus [goid 176] [pmid 11110791] [evidence IDA]; Complex of 3'-5' exoribonucleases found in the cytoplasm [goid 177] [pmid 11110791] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [pmid 11110791] [evidence IDA]	Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [pmid 11110791] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP11-3J10.8; hRrp40p; MGC15120; p10; Rrp40p; CGI-102; RRP40; MGC723; bA3J10.7	RP11-3J10.8; hRrp40p; MGC15120; p10; Rrp40p; CGI-102; RRP40; MGC723; bA3J10.7
Homo sapiens	RefSeq	NM_001002269.1	ILMN_174330	EXOSC3	NM_016042.2	NM_016042.2		51010	50511942	NM_016042.2	EXOSC3	NP_057126.2	ILMN_1708936	0001450131	A	871	CAGGTCAGTTGAGGCAAAAAACTATGGGTTTTTTCAGGTGAACCTCCCCC	9	-	37780607-37780656	9p13.2a	Homo sapiens exosome component 3 (EXOSC3), transcript variant 1, mRNA.	Complex of 3'-5' exoribonucleases found in the nucleus [goid 176] [pmid 11110791] [evidence IDA]; Complex of 3'-5' exoribonucleases found in the cytoplasm [goid 177] [pmid 11110791] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [pmid 11110791] [evidence IDA]	Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [pmid 11110791] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP11-3J10.8; hRrp40p; MGC15120; p10; Rrp40p; CGI-102; RRP40; MGC723; bA3J10.7	RP11-3J10.8; hRrp40p; MGC15120; p10; Rrp40p; CGI-102; RRP40; MGC723; bA3J10.7
Homo sapiens	Unigene	Hs.565830	ILMN_118254	HS.565830	Hs.565830		Hs.565830		83150046	DB338274			ILMN_1889394	0000630193	S	27	AGGAGCGGGGAGAGGGAAGAGGCAGCATTGGGAGAAAGGGGAAAGGAGAA	3	-	195416793-195416842		DB338274 TESTI2 Homo sapiens cDNA clone TESTI2035669 3, mRNA sequence					
Homo sapiens	RefSeq	XM_938244.1	ILMN_32866	LOC649179	XM_938244.2	XM_938244.2		649179	113429546	XM_938244.2	LOC649179	XP_943337.2	ILMN_1739609	0006560040	S	1549	CTGTGAACGAGGACAAGCTGTGCCAGTTGCAGGCCGAGATACAGAAGCAG				22q11.22a	PREDICTED: Homo sapiens similar to PRAME family member DJ1198H6.2 (LOC649179), mRNA.					
Homo sapiens	RefSeq	XM_938254.1	ILMN_32866	LOC649179	XM_938244.2	XM_938244.2		649179	113429546	XM_938244.2	LOC649179	XP_943337.2	ILMN_1787834	0005910091	S	259	GAACAGAGGAGGCAGGCACAGAGAGGTCCATGGAGGTGAACCACCCAGCA				22q11.22a	PREDICTED: Homo sapiens similar to PRAME family member DJ1198H6.2 (LOC649179), mRNA.					
Homo sapiens	RefSeq	NM_213595.1	ILMN_2025	ISCU	NM_213595.1	NM_213595.1		23479	56699455	NM_213595.1	ISCU	NP_998760.1	ILMN_2409062	0000780168	A	555	CCAGCTGTTTCCCACCTGCTGTGCAGTCACCTTAGATGTTCAGAAGCCGC	12	+	107486856-107486905	12q23.3d	Homo sapiens iron-sulfur cluster scaffold homolog (E. coli) (ISCU), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16527810] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11060020] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11060020] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16527810] [evidence IDA]	The process by which nitrogen is taken from its relatively inert molecular form (N2) in the atmosphere and converted into nitrogen compounds useful for other chemical processes, such as ammonia, nitrate and nitrogen dioxide [goid 9399] [pmid 8875867] [evidence TAS]; The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [pmid 11060020] [evidence TAS]; The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [pmid 11060020] [evidence TAS]; Functions to provide a physical support for the assembly of a multiprotein complex [goid 32947] [pmid 16527810] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	hnifU; 2310020H20Rik; MGC74517; NIFU; NIFUN; ISU2	hnifU; 2310020H20Rik; MGC74517; NIFU; NIFUN; ISU2
Homo sapiens	RefSeq	XM_001719453.1	ILMN_335703	LOC644000	XM_001719453.1	XM_001719453.1		644000	169170074	XM_001719453.1	LOC644000	XP_001719505.1	ILMN_3236258	0006860414	S	241	CTAAAATCTCACGACTGGCTCACTGCCTTACAGCCACATTGGCAGCTGTG	7	-	62502903-62502952	7q11.21b	PREDICTED: Homo sapiens hypothetical LOC644000 (LOC644000), mRNA.					
Homo sapiens	RefSeq	NM_022915.2	ILMN_16607	MRPL44	NM_022915.2	NM_022915.2		65080	21735610	NM_022915.2	MRPL44	NP_075066.1	ILMN_1671452	0000450468	S	1011	CCCAAAGAAACCTTGAGAGCAGAAAAGAGCATCACTGCCAGCTAGCCGCC	2	+	224539951-224539995:224539996-224540000	2q36.1d	Homo sapiens mitochondrial ribosomal protein L44 (MRPL44), nuclear gene encoding mitochondrial protein, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt [goid 4525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ12701; FLJ13990	FLJ12701; FLJ13990
Homo sapiens	RefSeq	NM_022915.2	ILMN_16607	MRPL44	NM_022915.2	NM_022915.2		65080	21735610	NM_022915.2	MRPL44	NP_075066.1	ILMN_2141523	0000290390	S	1364	GTGGCTCAGCCTCCCTAGTAGCTGGGATTACAGGCACACACCACCATACC	2	+	224540304-224540353	2q36.1d	Homo sapiens mitochondrial ribosomal protein L44 (MRPL44), nuclear gene encoding mitochondrial protein, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt [goid 4525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ12701; FLJ13990	FLJ12701; FLJ13990
Homo sapiens	RefSeq	XM_001717835.1	ILMN_345228	LOC100131316	XM_001717835.1	XM_001717835.1		100131316	169163060	XM_001717835.1	LOC100131316	XP_001717887.1	ILMN_3287488	0000010288	M	558	GTAGCTGCTTGGGGACGGAGGAGGCCTCTTCGCAATCCATTGCCCTGCTT	2	+	136460034-136460037:136460038-136460083	2q21.3b	PREDICTED: Homo sapiens hypothetical protein LOC100131316 (LOC100131316), mRNA.					
Homo sapiens	RefSeq	XM_001725829.1	ILMN_341280	LOC100129434	XM_001725829.1	XM_001725829.1		100129434	169163941	XM_001725829.1	LOC100129434	XP_001725881.1	ILMN_3183896	0004490601	A	1314	GGCATTCGGAGTAGAGCAAGCCACGAATGAGAACAGGTTCTGAAAGTGAC				2p16.1d	PREDICTED: Homo sapiens hypothetical protein LOC100129434 (LOC100129434), mRNA.					
Homo sapiens	RefSeq	NM_152551.3	ILMN_183652	SNRNP48	NM_152551.3	NM_152551.3		154007	71143122	NM_152551.3	SNRNP48	NP_689764.3	ILMN_3237516	0003190538	S	3623	TGGCCTCGGCCTCCTAAAGTGCTGGGATTACAAGTGTGAGCCACTGTGCC	6	+	7556649-7556698	6p24.3c	Homo sapiens small nuclear ribonucleoprotein 48kDa (U11/U12) (SNRNP48), mRNA.				dJ336K20B.1; FLJ32234; dJ512B11.2; MGC138905; MGC138904	dJ336K20B.1; FLJ32234; dJ512B11.2; MGC138905; MGC138904
Homo sapiens	RefSeq	NM_152551.3	ILMN_183652	SNRNP48	NM_152551.3	NM_152551.3		154007	71143122	NM_152551.3	SNRNP48	NP_689764.3	ILMN_1754304	0002350438	S	3715	GAGCCCAGGGCACTGGTTATATTCAGTAGGAAACTGAACTCAGCACTCAG	6	+	7556741-7556790	6p24.3c	Homo sapiens small nuclear ribonucleoprotein 48kDa (U11/U12) (SNRNP48), mRNA.				dJ336K20B.1; FLJ32234; dJ512B11.2; MGC138905; MGC138904	dJ336K20B.1; FLJ32234; dJ512B11.2; MGC138905; MGC138904
Homo sapiens	RefSeq	NM_004917.2	ILMN_46908	KLK4	NM_004917.3	NM_004917.3		9622	89142740	NM_004917.3	KLK4	NP_004908.3	ILMN_1792363	0005290707	S	1218	CGGTCCAATGCCACCTAGACTCTCCCTGTACACAGTGCCCCCTTGTGGCA	19	-	56101499-56101548	19q13.33d	Homo sapiens kallikrein-related peptidase 4 (KLK4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10077646] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10438493] [evidence NAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PSTS; MGC116827; KLK-L1; ARM1; PRSS17; MGC116828; EMSP; EMSP1	MGC116827; PSTS; KLK-L1; ARM1; PRSS17; MGC116828; EMSP; EMSP1
Homo sapiens	RefSeq	NM_199206.1	ILMN_12755	TCL1B	NM_199206.1	NM_199206.1		9623	40548374	NM_199206.1	TCL1B	NP_954676.1	ILMN_1792144	0005720047	I	834	TGAGGTGCCGTGTGACGGTGGCCTTGGAGGACCCAGCACTGACCCATAGA	14	+	95227816-95227865	14q32.13b	Homo sapiens T-cell leukemia/lymphoma 1B (TCL1B), transcript variant 2, mRNA.				TML1; TCL6f4; TCL6f1; TCL6; TCL6f3	TML1; TCL6f4; TCL6f1; TCL6; TCL6f3
Homo sapiens	RefSeq	XM_928844.1	ILMN_45709	LOC645863	XM_928844.1	XM_928844.1		645863	89027864	XM_928844.1	LOC645863	XP_933937.1	ILMN_1749068	0004890072	S	4501	CCCTGTGGCGGGAGGTGAGACATGTTGGCAGTAATGCTGCCTTGCTTTGT	8	+	7913869-7913918		PREDICTED: Homo sapiens hypothetical protein LOC645863 (LOC645863), mRNA.					
Homo sapiens	RefSeq	NM_005024.1	ILMN_166006	SERPINB10	NM_005024.1	NM_005024.1		5273	4826901	NM_005024.1	SERPINB10	NP_005015.1	ILMN_2147424	0001660356	S	905	TCAAGTCAACCCTGAGCAGTATGGGGATGAGTGATGCCTTCAGCCAAAGC	18	+	59753167-59753216	18q21.33b	Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 10 (SERPINB10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 7592909] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7592909] [evidence TAS]	PI10; bomapin	PI10; bomapin
Homo sapiens	RefSeq	NM_153488.3	ILMN_9119	MAGEA2B	NM_153488.3	NM_153488.3		266740	34335237	NM_153488.3	MAGEA2B	NP_705692.1	ILMN_1715393	0000990379	S	1571	ATGTTTTTGCTTCTTTGAGAATGCAAAAGAAATTAAATCTGAATAAAAAA	X	+	151637410-151637459	Xq28e	Homo sapiens melanoma antigen family A, 2B (MAGEA2B), mRNA.				MAGE2; MGC16973; MAGEA2	MAGE2; MGC16973; MAGEA2
Homo sapiens	Unigene	Hs.168162	ILMN_80119	HS.168162	Hs.168162		Hs.168162		30211989	CB955871			ILMN_1857239	0006510041	S	49	GCCTTCCATCACCGCAGTGTATTACCTTTGACCCTCGCTGGTCATCTGGT	14	+	56951151-56951200		AGENCOURT_13779116 NIH_MGC_184 Homo sapiens cDNA clone IMAGE:30349586 5, mRNA sequence					
Homo sapiens	RefSeq	NM_199461.2	ILMN_16199	NANOS1	NM_199461.2	NM_199461.2		340719	57232741	NM_199461.2	NANOS1	NP_955631.1	ILMN_1752009	0003180307	I	732	TTCTGCCGGAACAACAAGGAGGCGATGGCGCTCTACACCACCCATATCCT	10	+	120779949-120779998	10q26.11c	Homo sapiens nanos homolog 1 (Drosophila) (NANOS1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12690449] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_199461.2	ILMN_16199	NANOS1	NM_199461.2	NM_199461.2		340719	57232741	NM_199461.2	NANOS1	NP_955631.1	ILMN_1716469	0006350079	A	4427	ATGGGAGTAGACAGAGTTGTATGGCCTGGACAGTGGAAACCAAGAGCAGG	10	+	120783644-120783693	10q26.11c	Homo sapiens nanos homolog 1 (Drosophila) (NANOS1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12690449] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NR_003186.1	ILMN_168368	NCF1B	NR_003186.1	NR_003186.1		654816	114687641	NR_003186.1	NCF1B		ILMN_2106725	0000830750	S	305	ACGTGGTGGAGGTCGTGGAGAAGAGCGAGAGCGGTCAGACCTCCCACCTT	7	+	72281627-72281676	7q11.23a	Homo sapiens neutrophil cytosolic factor 1B pseudogene (NCF1B), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SH3PXD1B	SH3PXD1B
Homo sapiens	RefSeq	NM_016734.1	ILMN_899	PAX5	NM_016734.1	NM_016734.1		5079	9951919	NM_016734.1	PAX5	NP_057953.1	ILMN_1687052	0007380056	S	3224	TCACCAGGATGGCAGAGAGCCAGGGCAGAGAGAGACTGGACTTGGGATCA	9	-	36840367-36840416	9p13.2b	Homo sapiens paired box 5 (PAX5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 9 of histone H3 [goid 51573] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10524622] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [pmid 10524629] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10524629] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10524622] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	BSAP	BSAP
Homo sapiens	RefSeq	NM_001253.2	ILMN_15507	CDC5L	NM_001253.2	NM_001253.2		988	16357499	NM_001253.2	CDC5L	NP_001244.1	ILMN_1652907	0006760189	S	2549	CCCCGGAGGCTAGAGTGTCTAAAAGAAGACGTTCAGCGACAACAAGAAAG	6	+	44413590-44413604:44414344-44414378	6p21.1b	Homo sapiens CDC5 cell division cycle 5-like (S. pombe) (CDC5L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8917598] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]	KIAA0432; CEF1; PCDC5RP; dJ319D22.1; hCDC5	KIAA0432; CEF1; PCDC5RP; dJ319D22.1; hCDC5
Homo sapiens	RefSeq	NM_001136506.1	ILMN_372095	SLC22A24	NM_001136506.1	NM_001136506.1		283238	211059434	NM_001136506.1	SLC22A24	NP_001129978.1	ILMN_3249105	0000620176	S	155	CTTTTAAGAAGATTCAGTTGTCAACAGCTAGCAGTCTCTTTGCCAAATAA	11	-	62911489-62911538	11q12.3b	Homo sapiens solute carrier family 22, member 24 (SLC22A24), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Homo sapiens	RefSeq	NM_022073.2	ILMN_27171	EGLN3	NM_022073.3	NM_022073.3		112399	130509310	NM_022073.3	EGLN3	NP_071356.1	ILMN_1667626	0006130484	S	2626	GCAACATACTCTCAGCACCTAAAATAGTGCCGGGAACATAGTAAGGGCTC	14	-	34393467-34393516	14q13.1c	Homo sapiens egl nine homolog 3 (C. elegans) (EGLN3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15721254] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from 2-oxoglutarate and one other donor, and one atom of oxygen is incorporated into each donor [goid 16706] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC125998; HIFPH3; PHD3; MGC125999; FLJ21620	PHD3; FLJ21620; MGC125998; HIFPH3; MGC125999
Homo sapiens	RefSeq	NM_031275.3	ILMN_2306	TEX12	NM_031275.4	NM_031275.4		56158	133930777	NM_031275.4	TEX12	NP_112565.1	ILMN_1803803	0000290243	S	192	GGAGTCTCCAGTGCCAGATAGTCCACAGCTGTCCTCTCTTGGAAAATCAG	11	+	111545261-111545264:111546352-111546397	11q23.1c	Homo sapiens testis expressed 12 (TEX12), mRNA.					
Homo sapiens	RefSeq	XM_932015.1	ILMN_40809	LOC643401	XM_932015.1	XM_932015.1		643401	88982372	XM_932015.1	LOC643401	XP_937108.1	ILMN_1658593	0007610521	I	1	ATGCAATTGGAGAAACTGGTTGTTTTACCAGGCGTTGATTGGAAATGTGT	5	+	27511400-27511449		PREDICTED: Homo sapiens hypothetical protein LOC643401, transcript variant 2 (LOC643401), mRNA.					
Homo sapiens	RefSeq	XM_932015.1	ILMN_40809	LOC643401	XM_932015.1	XM_932015.1		643401	88982372	XM_932015.1	LOC643401	XP_937108.1	ILMN_1700280	0001690593	A	139	CATACAGGGTTCTTAACCTGCGATGAGGGAAACTTCCCAGGGCTTGTCTG	5	+	27511538-27511559:27513503-27513530		PREDICTED: Homo sapiens hypothetical protein LOC643401, transcript variant 2 (LOC643401), mRNA.					
Homo sapiens	RefSeq	XM_934288.1	ILMN_174804	LOC730109	XM_001132464.1	XM_001132464.1		730109	113414748	XM_001132464.1	LOC730109	XP_001132464.1	ILMN_1747715	0005690014	S	215	TTCGCAGACCAAGAGCAAGTCGGCACACCAGGACAGGCACTCGCATGGGT	3	+	161227093-161227142	3q26.1a	PREDICTED: Homo sapiens similar to hCG1811563 (LOC730109), mRNA.					
Homo sapiens	RefSeq	NM_032649.5	ILMN_28642	CNDP1	NM_032649.5	NM_032649.5		84735	62241004	NM_032649.5	CNDP1	NP_116038.4	ILMN_1694653	0003460037	S	1922	GGTTTAAGGTCCCCCACTGCACACCTTCCTCAAGTCATAGCTGCTTGCAG	18	+	70402965-70403014	18q22.3d	Homo sapiens carnosine dipeptidase 1 (metallopeptidase M20 family) (CNDP1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	CPGL2; CN1; MGC102737; MGC10825; MGC142072; HsT2308	CPGL2; CN1; MGC102737; MGC10825; MGC142072; HsT2308
Homo sapiens	RefSeq	XM_001724769.1	ILMN_339704	LOC100134253	XM_001724769.1	XM_001724769.1		100134253	169163902	XM_001724769.1	LOC100134253	XP_001724821.1	ILMN_3239397	0004590382	S	801	TCGGATGGCCTTGCGCATCATGGTGTTCTTGCCCATCAGCACCACGACCT					PREDICTED: Homo sapiens hypothetical protein LOC100134253 (LOC100134253), mRNA.					
Homo sapiens	RefSeq	NM_001018089.1	ILMN_6341	NARG2	NM_001018089.1	NM_001018089.1		79664	66346703	NM_001018089.1	NARG2	NP_001018099.1	ILMN_2346460	0001660687	A	4910	GTTTTGGTTGTGAATCATTTGCCAGCGAGCCAAGGGAGAGGCAGGGATTC	15	-	60713897-60713946	15q22.2a	Homo sapiens NMDA receptor regulated 2 (NARG2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			BRCC1	BRCC1
Homo sapiens	RefSeq	NM_001018089.1	ILMN_6341	NARG2	NM_001018089.1	NM_001018089.1		79664	66346703	NM_001018089.1	NARG2	NP_001018099.1	ILMN_1666610	0006590576	A	6640	CCAGGTCTCTCATGAAGTTGCAGTCAGGCTCTTGGCTAGGGCTGCAGTCA	15	-	60712167-60712216	15q22.2a	Homo sapiens NMDA receptor regulated 2 (NARG2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			BRCC1	BRCC1
Homo sapiens	RefSeq	NM_001130026.1	ILMN_364866	FAM115C	NM_001130026.1	NM_001130026.1		285966	194097431	NM_001130026.1	FAM115C	NP_001123498.1	ILMN_3184048	0001170437	A	1974	GAAGGGGATGACCAGACCCCTCAGTCATGTAGCGACCTGGATCCCAGTAG	7	+	143421813-143421823:143421824-143421862	7q35a	Homo sapiens family with sequence similarity 115, member C (FAM115C), transcript variant 3, mRNA.					
Homo sapiens	RefSeq	NM_001001666.1	ILMN_8590	ANO7	NM_001001891.3	NM_001001891.3		50636	145207957	NM_001001891.3	ANO7	NP_001001891.2	ILMN_1675423	0002470204	A	441	TCCTCGTTTGGGAGGAGGACCTGAAGCTAGACAGGCAGCAGGACAGTGCC	2	+	241783800-241783849	2q37.3f	Homo sapiens anoctamin 7 (ANO7), transcript variant NGEP-L, mRNA.				PCANAP5; IPCA5; D-TMPP; IPCA-5; PCANAP5L; NGEP	PCANAP5; D-TMPP; IPCA-5; PCANAP5L; NGEP
Homo sapiens	RefSeq	NM_001001891.1	ILMN_8590	ANO7	NM_001001891.3	NM_001001891.3		50636	145207957	NM_001001891.3	ANO7	NP_001001891.2	ILMN_1683824	0006020008	I	3115	GCTCACAAGGCCCTCTTTGTTTCCTGCTCCCAGACATAAGCCCAAGGGGC	2	+	241812451-241812500	2q37.3f	Homo sapiens anoctamin 7 (ANO7), transcript variant NGEP-L, mRNA.				PCANAP5; IPCA5; D-TMPP; IPCA-5; PCANAP5L; NGEP	PCANAP5; D-TMPP; IPCA-5; PCANAP5L; NGEP
Homo sapiens	RefSeq	NM_020310.2	ILMN_21283	MNT	NM_020310.2	NM_020310.2		4335	58530884	NM_020310.2	MNT	NP_064706.1	ILMN_1792910	0006760255	S	4528	CCCAGAGGTGGCCCTTGTTTACAGTGAGGACTCGGCCACTGTGTCTCTGT	17	-	2287618-2287667	17p13.3c	Homo sapiens MAX binding protein (MNT), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9184233] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9184233] [evidence TAS]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9184233] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9184233] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9598315] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9598315] [evidence TAS]	MXD6; ROX; MAD6	MXD6; ROX; MAD6
Homo sapiens	RefSeq	XR_039484.1	ILMN_352235	LOC100129141	XR_039484.1	XR_039484.1		100129141	169163171	XR_039484.1	LOC100129141		ILMN_3272996	0006270131	M	461	TGTGAGAACCAATGGGAAGGAGCCTGAGCTGCTGGAATCTATTCCCTAGG	2	-	62613230-62613279	2p15b	PREDICTED: Homo sapiens misc_RNA (LOC100129141), miscRNA.					
Homo sapiens	RefSeq	NR_030361.1	ILMN_388131	MIR33B	NR_030361.1	NR_030361.1		693120	262206145	NR_030361.1	MIR33B		ILMN_3311070	0002600626	S	16	TGCATTGCTGTTGCATTGCACGTGTGTGAGGCGGGTGCAGTGCCTCGGCA				17p11.2g	Homo sapiens microRNA 33b (MIR33B), microRNA.					
Homo sapiens	RefSeq	NM_001045557.1	ILMN_179004	SLA	NM_001045557.1	NM_001045557.1		6503	113930744	NM_001045557.1	SLA	NP_001039022.1	ILMN_2345898	0005870164	A	3046	CGAATGTGATTGGAACATTTGGGGAGCACCCAGAGGGATTTCTCAGTGGG	8	-	134118227-134118276	8q24.22c	Homo sapiens Src-like-adaptor (SLA), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]		Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 7543898] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLA1; SLAP	SLA1; SLAP
Homo sapiens	RefSeq	NM_005802.2	ILMN_177082	TOPORS	NM_005802.2	NM_005802.2		10210	40805103	NM_005802.2	TOPORS	NP_005793.2	ILMN_2122669	0005670544	S	3670	GAGTTATTCTGGAAATGTGTTATAAGCTAGGAGAATCCCTTTGGACAGTC	9	-	32541335-32541384	9p21.1a	Homo sapiens topoisomerase I binding, arginine/serine-rich (TOPORS), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 14516784] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 15735665] [evidence IDA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [pmid 14516784] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11278651] [evidence IDA]; Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 10415337] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14516784] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with the enzyme DNA topoisomerase I [goid 17033] [pmid 10352183] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP31; TP53BPL; P53BP3; LUN	RP31; TP53BPL; P53BP3; LUN
Homo sapiens	RefSeq	NM_004533.2	ILMN_16419	MYBPC2	NM_004533.3	NM_004533.3		4606	133908640	NM_004533.3	MYBPC2	NP_004524.3	ILMN_1799743	0005270100	S	3517	CCTGACCCCAATCCCCAACCTCCCAGGACTGTGTTCTTTCTGGAGTTTTC	19	+	50969502-50969551	19q13.33c	Homo sapiens myosin binding protein C, fast type (MYBPC2), mRNA.	Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8375400] [evidence TAS]	MGC163408; MYBPCF; MYBPC	MGC163408; MYBPCF; MYBPC
Homo sapiens	RefSeq	XM_942122.1	ILMN_37180	LOC652597	XM_942122.1	XM_942122.1		652597	89071850	XM_942122.1	LOC652597	XP_947215.1	ILMN_1772033	0002710674	S	494	GCCTCATCCAGGTATCTTTCCGGGTCTTTCACGTGGGGATGACGATGATC					PREDICTED: Homo sapiens similar to Deformed epidermal autoregulatory factor 1 homolog (Nuclear DEAF-1 related transcriptional regulator) (NUDR) (Suppressin) (Zinc finger MYND domain containing protein 5) (LOC652597), mRNA.					
Homo sapiens	RefSeq	NM_032758.3	ILMN_794	PHF5A	NM_032758.3	NM_032758.3		84844	55925655	NM_032758.3	PHF5A	NP_116147.1	ILMN_2112402	0000450598	S	768	CTTGCAGCAGCTCTGGTGGCAGCTGTCCTTGAGGAACCTTTGGTGTGTGG	22	-	41855968-41856017	22q13.2a	Homo sapiens PHD finger protein 5A (PHF5A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Ribonucleoprotein complex containing small nuclear RNA U2; a component of the major spliceosome complex [goid 5686] [pmid 12234937] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12234937] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]	INI; bK223H9.2; SF3b14b; MGC1346	INI; bK223H9.2; SF3b14b; MGC1346
Homo sapiens	RefSeq	NM_032758.3	ILMN_794	PHF5A	NM_032758.3	NM_032758.3		84844	55925655	NM_032758.3	PHF5A	NP_116147.1	ILMN_1775901	0000130037	S	533	CCTTCACCCAGACACGTGGTAGGGATGGAAAAGGATTCTTCACAGAGCAC	22	-	41856203-41856252	22q13.2a	Homo sapiens PHD finger protein 5A (PHF5A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Ribonucleoprotein complex containing small nuclear RNA U2; a component of the major spliceosome complex [goid 5686] [pmid 12234937] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12234937] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]	INI; bK223H9.2; SF3b14b; MGC1346	INI; bK223H9.2; SF3b14b; MGC1346
Homo sapiens	Unigene	Hs.540741	ILMN_105322	HS.540741	Hs.540741		Hs.540741		3162390	AA983865			ILMN_1827572	0000070598	S	156	GGCGACTTAAAAATGGACTGCAGTTTTCATCTGTATCCAGAGGGGGCGCC	17	-	67626509-67626558		op63a09.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1581496 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038777.1	ILMN_339580	LOC647288	XR_038777.1	XR_038777.1		647288	169206234	XR_038777.1	LOC647288		ILMN_3204768	0001820026	A	2321	AACATCTGTCCACTGAGGGGTTTACCTCCTTACTTTCATCCAAGACCTGG				13q22.2a	PREDICTED: Homo sapiens misc_RNA (LOC647288), miscRNA.					
Homo sapiens	RefSeq	XM_938364.1	ILMN_44600	LOC649296	XM_938364.1	XM_938364.1		649296	88952533	XM_938364.1	LOC649296	XP_943457.1	ILMN_1813343	0004590341	S	1756	CCATTCCGTCCCATCTTGGGCTAAAGGTATCTACGTGGCTTTCCACACTG					PREDICTED: Homo sapiens similar to Olfactory receptor 10R2 (LOC649296), mRNA.					
Homo sapiens	RefSeq	NM_014996.1	ILMN_4983	PLCH1	NM_014996.1	NM_014996.1		23007	57863297	NM_014996.1	PLCH1	NP_055811.1	ILMN_2043060	0005910521	S	5740	TTACAGACTGCGAACAACGGCTTTCAGAATGAGGGACTTCCATCAGACTC	3	-	156680640-156680689	3q25.31a	Homo sapiens phospholipase C, eta 1 (PLCH1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp434C1372; PLCeta1; PLCL3; MGC117152	DKFZp434C1372; PLCeta1; PLCL3; MGC117152
Homo sapiens	RefSeq	NM_022745.2	ILMN_175478	ATPAF1	NM_022745.3	NM_022745.3		64756	110349779	NM_022745.3	ATPAF1	NP_073582.2	ILMN_1790603	0004890491	S	1621	ATGCCCCCCAGAGATGCCTTTAGTGTAAGTAGCTGGCTTGGGGTATCAGC	1	-	47100869-47100918	1p33d	Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 1 (ATPAF1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]		FLJ22351; ATP11p; MGC88060; ATP11	FLJ22351; ATP11p; ATP11
Homo sapiens	RefSeq	NM_001013634.1	ILMN_18991	LOC387790	NM_001013634.1	NM_001013634.1		387790	61966724	NM_001013634.1	LOC387790	NP_001013656.1	ILMN_1721430	0001690390	S	1952	GGGCTGTGAAATTAGGGAAAGCTTCCGGGGCAGGTGGAACAGCATGAGGC	11	+	75772111-75772160		Homo sapiens hypothetical LOC387790 (LOC387790), mRNA.					
Homo sapiens	RefSeq	NM_003118.2	ILMN_1780	SPARC	NM_003118.2	NM_003118.2		6678	48675809	NM_003118.2	SPARC	NP_003109.1	ILMN_1796734	0005050382	S	2779	CGCAGCTCCCCAATCACACTAGCAACATTTCAAGTGCTTGAGAGCCATGC	5	-	151041412-151041461	5q33.1d	Homo sapiens secreted protein, acidic, cysteine-rich (osteonectin) (SPARC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1737102] [evidence EXP]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 1737102] [evidence EXP]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 7034958] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 15609325] [evidence NAS]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 7034958] [evidence TAS]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 7034958] [evidence TAS]	ON	ON
Homo sapiens	RefSeq	NM_017575.3	ILMN_20830	SMG6	NM_017575.3	NM_017575.3		23293	30425541	NM_017575.3	SMG6	NP_060045.3	ILMN_1695280	0007160563	S	5452	GCCCCTTTAGCTGGTACCTCAGTGGGGAGGCTTCCTTACCAAGAATGAGT	17	-	1910299-1910348	17p13.3d-p13.3c	Homo sapiens Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) (SMG6), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14636577] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits [goid 5697] [pmid 12699629] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14636577] [evidence IDA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 16488880] [evidence TAS]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [pmid 12699629] [evidence IMP]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 16488880] [evidence TAS]; Any process that modulates the frequency, rate or extent of removal of phosphate groups from a molecule [goid 35303] [pmid 15721257] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12699629] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [pmid 12699629] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SMG-6; EST1A; KIAA0732; C17orf31	SMG-6; EST1A; KIAA0732; C17orf31
Homo sapiens	RefSeq	XM_939218.1	ILMN_46495	LOC650132	XM_939218.1	XM_939218.1		650132	88954861	XM_939218.1	LOC650132	XP_944311.1	ILMN_1805300	0006400563	S	2	TGTCAGAGGTGACCCGGAGTCTGCTGCAGCGCTGGGGCGCCAGTTTTAGG					PREDICTED: Homo sapiens similar to chromosome 1 open reading frame 80 (LOC650132), mRNA.					
Homo sapiens	RefSeq	NM_003839.2	ILMN_16552	TNFRSF11A	NM_003839.2	NM_003839.2		8792	22547111	NM_003839.2	TNFRSF11A	NP_003830.1	ILMN_1698952	0001510240	S	3045	GATGGAGAAAATGAACAGGACATGGGGCTCCTGGAAAGAAAGGGCCCGGG	18	+	58204403-58204452	18q21.33a	Homo sapiens tumor necrosis factor receptor superfamily, member 11a, NFKB activator (TNFRSF11A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9367155] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9367155] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9367155] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9367155] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10075662] [evidence IPI]	ODFR; CD265; TRANCER; RANK; OFE	RANK; OFE; ODFR; CD265; TRANCER
Homo sapiens	RefSeq	NM_020207.1	ILMN_137268	C9ORF102	NM_020207.1	NM_020207.1		56959	39930392	NM_020207.1	C9orf102	NP_064592.1	ILMN_1753190	0002510768	S	2647	GTTGAGGAGAGAGGGCTTCCGTGTACTCAGGATGTAGAGTCATTGCTCAG	9	+	97816450-97816499	9q22.32b	Homo sapiens chromosome 9 open reading frame 102 (C9orf102), mRNA.				FLJ37706; RP11-346B7.2; SR278	FLJ37706; RP11-346B7.2; SR278
Homo sapiens	RefSeq	NR_003715.1	ILMN_338318	LOC93432	NR_003715.1	NR_003715.1		93432	156713455	NR_003715.1	LOC93432		ILMN_3249088	0007040673	S	1336	GAGTGTGGATCTTGGGGAGCAATGGCTTTGCTGTTGGGGAGGGATATCCG	7	+	141487348-141487388:141490038-141490046	7q34e	Homo sapiens maltase-glucoamylase-like pseudogene (LOC93432), non-coding RNA.				MGC138180; MGC138178	MGC138180; MGC138178
Homo sapiens	RefSeq	NM_002601.2	ILMN_2430	PDE6D	NM_002601.2	NM_002601.2		5147	56676309	NM_002601.2	PDE6D	NP_002592.1	ILMN_1790680	0001500491	S	835	GCAGGGGACAGGTCTCAAGTCCTTCCCAGCATACACACAGGGAACAAACA	2	-	232597380-232597429	2q37.1b	Homo sapiens phosphodiesterase 6D, cGMP-specific, rod, delta (PDE6D), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9570951] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11980706] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PDED	PDED
Homo sapiens	RefSeq	NM_001759.2	ILMN_1503	CCND2	NM_001759.2	NM_001759.2		894	16950656	NM_001759.2	CCND2	NP_001750.1	ILMN_1667081	0001570348	S	5971	AACTGCTGGCCAACTCTTACATCCCCAGCAAATCATCGGGCCATTGGATT	12	+	4284268-4284317	12p13.32a	Homo sapiens cyclin D2 (CCND2), mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [pmid 8114739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [pmid 8114739] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of CDK activity [goid 45737] [pmid 8114739] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11896535] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8114739] [evidence IPI]	KIAK0002; MGC102758	KIAK0002; MGC102758
Homo sapiens	RefSeq	NM_001006607.1	ILMN_6366	LOC474170	NM_001006607.1	NM_001006607.1		474170	54633332	NM_001006607.1	LOC474170	NP_001006608.1	ILMN_1790114	0001030706	S	2053	CCCCAAGGGAGGTGGAACAGCCCCACACACAGCAGGGGCATGAGAAGTTA	17	+	41981451-41981500	17q21.32a	Homo sapiens c114 SLIT-like testicular protein (LOC474170), mRNA.				FLJ45049	FLJ45049
Homo sapiens	RefSeq	XM_944575.1	ILMN_43238	LOC651280	XM_944575.1	XM_944575.1		651280	89040997	XM_944575.1	LOC651280	XP_949668.1	ILMN_1738262	0006350328	S	584	AGCTCTCATCGGCCCCCGCACCCCGTTCCTATCTCGCACTTGACCTGGGC					PREDICTED: Homo sapiens hypothetical protein LOC651280 (LOC651280), mRNA.					
Homo sapiens	RefSeq	XM_001126471.1	ILMN_179607	LOC730278	XM_001126471.1	XM_001126471.1		730278	113419744	XM_001126471.1	LOC730278	XP_001126471.1	ILMN_3241234	0006770601	S	46	TCCCTGATTGCTGTTTTCCAGAAGTATGCTGGAAAGGATGGTTACAACCG	7	+	102262858-102262907		PREDICTED: Homo sapiens hypothetical LOC730278 (LOC730278), mRNA.					
Homo sapiens	RefSeq	XR_001429.1	ILMN_137604	FLJ32867	XR_001429.1	XR_001429.1		139420	89060594	XR_001429.1	FLJ32867		ILMN_1762018	0002100605	A	1368	CCTCATCTTAGCTCCTAAAATCTATATGGGGCACCCTCAAAATGTGGCTC				Xp21.3b	PREDICTED: Homo sapiens FLJ32867 protein, transcript variant 2 (FLJ32867), misc RNA.					
Homo sapiens	RefSeq	NM_182584.1	ILMN_20093	FLJ33706	NM_182584.1	NM_182584.1		284805	32698989	NM_182584.1	FLJ33706	NP_872390.1	ILMN_1773383	0005670240	S	2981	GGTGGACTTCAGTGGCCATCCCAGGCCTCCACGGATCAACCACAAGATCT	20	-	30684747-30684796	20q11.21c	Homo sapiens hypothetical protein FLJ33706 (FLJ33706), mRNA.					
Homo sapiens	RefSeq	NM_022466.5	ILMN_15905	IKZF5	NM_022466.5	NM_022466.5		64376	148747591	NM_022466.5	IKZF5	NP_071911.3	ILMN_3307796	0002360424	S	1269	TATAGTCCAGTGGCAGGTCCAAGCAGTGAGCCAAGTGCCCACACGAGCAC	10	-	124753789-124753838	10q26.13b	Homo sapiens IKAROS family zinc finger 5 (Pegasus) (IKZF5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp781B0249; PEGASUS; ZNFN1A5; FLJ22973	DKFZp781B0249; PEGASUS; FLJ22973
Homo sapiens	RefSeq	XM_934954.1	ILMN_169401	LOC653641	XM_496076.3	XM_496076.3		653641	113425282	XM_496076.3	LOC653641	XP_496076.1	ILMN_1737213	0001070370	A	1489	AGCGGAACCAACAGCTAGAGACCCAGCTAAGCCTCGTGGCTCTCCCTGGA	15	+	73347705-73347754	15q24.2a	PREDICTED: Homo sapiens similar to Golgin subfamily A member 6 (Golgin linked to PML) (Golgin-like protein), transcript variant 1 (LOC653641), mRNA.					
Homo sapiens	RefSeq	NM_015460.2	ILMN_28637	MYRIP	NM_015460.2	NM_015460.2		25924	59853351	NM_015460.2	MYRIP	NP_056275.2	ILMN_1668125	0004220370	I	4537	GCAGCAGCAGCCTGCTGTGTGGCATCTGAACTTTTATAAAGGTTTCCTTG	3	+	40266816-40266821:40266934-40266977	3p22.1c	Homo sapiens myosin VIIA and Rab interacting protein (MYRIP), mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11964381] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11964381] [evidence NAS]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp586F1018; SLAC2C; MGC130034; FLJ44025; SLAC2-C; MGC130035	DKFZp586F1018; SLAC2C; MGC130034; FLJ44025; SLAC2-C; MGC130035
Homo sapiens	RefSeq	NM_005710.2	ILMN_24478	PQBP1	NM_005710.2	NM_005710.2		10084	74027245	NM_005710.2	PQBP1	NP_005701.1	ILMN_1692429	0004810228	I	136	TCGGAGTCAGATGAGTACATGTTTACGGGAGGCGCTTGGTTACGGGATCC	X	+	48640618-48640667	Xp11.23c	Homo sapiens polyglutamine binding protein 1 (PQBP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10198427] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10198427] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9875212] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10198427] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SHS; NPW38; MRXS3; RENS1; MRXS8; MRX55	NPW38; RENS1; SHS; MRXS3; MRXS8; MRX55
Homo sapiens	RefSeq	NM_138701.1	ILMN_20229	C7ORF11	NM_138701.1	NM_138701.1		136647	20162565	NM_138701.1	C7orf11	NP_619646.1	ILMN_2183885	0002900047	S	767	CTTGCAACATTTAGCTCTGGAAGTACCTACCACATTTTAGAGATTTACCG	7	-	40138956-40139005	7p14.1c	Homo sapiens chromosome 7 open reading frame 11 (C7orf11), mRNA.				ORF20; ABHS; TTDN1	ORF20; ABHS; TTDN1
Homo sapiens	RefSeq	NM_138701.1	ILMN_20229	C7ORF11	NM_138701.1	NM_138701.1		136647	20162565	NM_138701.1	C7orf11	NP_619646.1	ILMN_1745119	0001470390	S	311	TGGCTCCTACTCCAGGTCCCCCGCGGGGTCCCAGCAGCAATTCGGCTACT	7	-	40140381-40140430	7p14.1c	Homo sapiens chromosome 7 open reading frame 11 (C7orf11), mRNA.				ORF20; ABHS; TTDN1	ORF20; ABHS; TTDN1
Homo sapiens	RefSeq	NM_018724.3	ILMN_7637	IL20	NM_018724.3	NM_018724.3		50604	50845426	NM_018724.3	IL20	NP_061194.2	ILMN_3248857	0007150546	S	633	CCTGCAGAGGAGGCATGACCCCAAACCACCATCTCTTTACTGTACTAGTC	1	+	205108590-205108639	1q32.1h	Homo sapiens interleukin 20 (IL20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11470428] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42517] [pmid 11470428] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of epidermal cell differentiation [goid 45606] [pmid 11470428] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation [goid 45618] [pmid 11470428] [evidence TAS]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [pmid 11470428] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with the interleukin-20 receptor [goid 45517] [pmid 11470428] [evidence TAS]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	MGC96907; ZCYTO10; IL-20; IL10D	MGC96907; ZCYTO10; IL-20; IL10D
Homo sapiens	RefSeq	XM_499153.2	ILMN_42214	LOC441454	XM_499153.2	XM_499153.2		441454	89067183	XM_499153.2	LOC441454	XP_499153.2	ILMN_1718034	0006840270	S	153	GGTAGATGAAGAAGGGGAAGAAAGCAAGCGGGCAGCTGAAGATGATGAGG				9q22.33a	PREDICTED: Homo sapiens hypothetical LOC441454 (LOC441454), mRNA.					
Homo sapiens	RefSeq	NM_203343.1	ILMN_15301	EPB41	NM_203343.1	NM_203343.1		2035	42716288	NM_203343.1	EPB41	NP_976218.1	ILMN_2323427	0007050450	A	4107	TCCCAGTTCCAGCTTCCTAAAATAGACAGTGGGTATCGGGCAGCAGTCAC	1	+	29317588-29317637	1p35.3a	Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) (EPB41), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9598318] [evidence TAS]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [pmid 6894932] [evidence TAS]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [pmid 16254212] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16060676] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 6894932] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 6894932] [evidence TAS]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [pmid 16669616] [evidence IDA]	HE; EL1; 4.1R	HE; EL1; 4.1R
Homo sapiens	RefSeq	NM_004115.2	ILMN_24172	FGF14	NM_004115.2	NM_004115.2		2259	28872754	NM_004115.2	FGF14	NP_004106.1	ILMN_1732976	0006370088	I	111	CGGGCTCTGCAACGGCAACCTGGTGGATATCTTCTCCAAAGTGCGCATCT	13	-	101366836-101366885	13q33.1a-q33.1b	Homo sapiens fibroblast growth factor 14 (FGF14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8790420] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8790420] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8790420] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8790420] [evidence TAS]	MGC119129; FHF4; SCA27	MGC119129; FHF4; SCA27
Homo sapiens	RefSeq	NM_004401.2	ILMN_6993	DFFA	NM_004401.2	NM_004401.2		1676	47132578	NM_004401.2	DFFA	NP_004392.1	ILMN_2385220	0000050224	A	1676	AGTAATTGGCAGTGACTATGGGCGCACTGCCTAACATTTAGCCCTGCCCC	1	-	10520915-10520964	1p36.22c	Homo sapiens DNA fragmentation factor, 45kDa, alpha polypeptide (DFFA), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15572351] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9108473] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9108473] [evidence TAS]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 15572351] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9108473] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 9564035] [evidence IDA]	 [goid 4537] [pmid 9108473] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]	DFF-45; ICAD; DFF1	DFF-45; ICAD; DFF1
Homo sapiens	RefSeq	XM_001714501.1	ILMN_348719	LOC100128960	XM_001714501.1	XM_001714501.1		100128960	169216513	XM_001714501.1	LOC100128960	XP_001714553.1	ILMN_3192439	0006660215	A	620	GAGCTGTGGGTGAGGCAAGAGGGACAAATGTAACAAGAGCCTGGGTGCAG				Xq28f	PREDICTED: Homo sapiens similar to paraneoplastic antigen MA2 (LOC100128960), mRNA.					
Homo sapiens	RefSeq	XM_001714501.1	ILMN_348719	LOC100128960	XM_001714501.1	XM_001714501.1		100128960	169216513	XM_001714501.1	LOC100128960	XP_001714553.1	ILMN_3268911	0006960240	M	378	AGCAGGAGCCATAGGTGAAACAGGAGCTGTGGGTAAGGGTGAGGCAGAAG				Xq28f	PREDICTED: Homo sapiens similar to paraneoplastic antigen MA2 (LOC100128960), mRNA.					
Homo sapiens	RefSeq	NM_001079843.1	ILMN_175224	CASZ1	NM_001079843.1	NM_001079843.1		54897	119709833	NM_001079843.1	CASZ1	NP_001073312.1	ILMN_2340202	0004070750	A	3682	AGCTGGCTTCCACCATACCCCAGATGCCTCAGATCCCAGCGTCAGTGCCT	1	-	10708187-10708196:10709127-10709166	1p36.22c	Homo sapiens castor zinc finger 1 (CASZ1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF693; SRG; CST; cst; dJ734G22.1; FLJ12223; RP4-734G22.2; FLJ20321	dJ734G22.1; FLJ12223; ZNF693; SRG; CST; cst; RP4-734G22.2; FLJ20321
Homo sapiens	RefSeq	NM_001079843.1	ILMN_175224	CASZ1	NM_001079843.1	NM_001079843.1		54897	119709833	NM_001079843.1	CASZ1	NP_001073312.1	ILMN_2256953	0004850184	I	7120	TTTTGTCCTCTCAGCTGCCCACAGCCAGAAAGCCAGGACCACCCGAACTG	1	-	10697673-10697722	1p36.22c	Homo sapiens castor zinc finger 1 (CASZ1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF693; SRG; CST; cst; dJ734G22.1; FLJ12223; RP4-734G22.2; FLJ20321	dJ734G22.1; FLJ12223; ZNF693; SRG; CST; cst; RP4-734G22.2; FLJ20321
Homo sapiens	RefSeq	XM_939643.1	ILMN_41167	LOC650556	XM_939643.1	XM_939643.1		650556	89066298	XM_939643.1	LOC650556	XP_944736.1	ILMN_1748248	0003800615	S	21	TGGATTTGAACCCAGGCCCTACCTGCCTTCCCTAGGAGTGAGCTCTGTGG					PREDICTED: Homo sapiens similar to Phosphorylase b kinase gamma catalytic chain, testis/liver isoform (PHK-gamma-T) (Phosphorylase kinase gamma subunit 2) (PSK-C3) (LOC650556), mRNA.					
Homo sapiens	RefSeq	XM_937394.1	ILMN_40218	LOC648342	XM_937394.1	XM_937394.1		648342	89057224	XM_937394.1	LOC648342	XP_942487.1	ILMN_1671678	0003440458	S	2851	CTAGTTAACAGTCAGATAAAGTAGGCCTCTGAGCACCCTGGGGGTGCGTG					PREDICTED: Homo sapiens hypothetical protein LOC648342 (LOC648342), mRNA.					
Homo sapiens	RefSeq	NM_032385.1	ILMN_16262	C5ORF4	NM_032385.3	NM_032385.3		10826	146198574	NM_032385.3	C5orf4	NP_115761.2	ILMN_1716154	0002190619	I	795	GTGGACAGCTCCCATTGGCGTGATCTCTCTCTATGCCCACCCTATAGAGC	5	-	154203016-154203065	5q33.2b	Homo sapiens chromosome 5 open reading frame 4 (C5orf4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	FLJ13758	FLJ13758
Homo sapiens	RefSeq	NM_016348.1	ILMN_16262	C5ORF4	NM_032385.3	NM_032385.3		10826	146198574	NM_032385.3	C5orf4	NP_115761.2	ILMN_1728742	0001690240	A	2575	CTCCCTAGGAGGCTTTTGCCCTCAGCTTGAATACAGTTCCTGGTGCATCA	5	-	154198595-154198644	5q33.2b	Homo sapiens chromosome 5 open reading frame 4 (C5orf4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	FLJ13758	FLJ13758
Homo sapiens	RefSeq	XR_041493.1	ILMN_344572	LOC729291	XR_041493.1	XR_041493.1		729291	169204298	XR_041493.1	LOC729291		ILMN_3225944	0003190041	A	2865	GCGGGGTCATATGGTAACTCTATGTTTAACCCCTTGTGGAACTACCACAC	12	-	28232306-28232355	12p11.22b	PREDICTED: Homo sapiens hypothetical protein LOC729291 (LOC729291), miscRNA.					
Homo sapiens	RefSeq	NR_030365.1	ILMN_388144	MIR635	NR_030365.1	NR_030365.1		693220	262206163	NR_030365.1	MIR635		ILMN_3308728	0001400424	S	2	GAGAGGAGCTGCCACTTGGGCACTGAAACAATGTCCATTAGGCTTTGTTA				17q24.2c	Homo sapiens microRNA 635 (MIR635), microRNA.					
Homo sapiens	Unigene	Hs.127775	ILMN_76483	HS.127775	Hs.127775		Hs.127775		22749650	BC031939			ILMN_1878928	0004900544	S	478	GAAAACGACCCGCTAAAAAAGCCAAGAGGGAAGGACCCAGCACACAGCCG	8	+	37703896-37703945		Homo sapiens cDNA clone IMAGE:4827062					
Homo sapiens	RefSeq	NM_133480.1	ILMN_7649	TADA3	NM_133480.1	NM_133480.1		10474	19743893	NM_133480.1	TADA3	NP_597814.1	ILMN_1770141	0003990593	I	2188	AGTTTGGTTTTTTAATTATGGTAAAGGCATAATATAAAATGTATCTCCAT	3	-	9825128-9825177	3p25.3c	Homo sapiens transcriptional adaptor 3 (TADA3), transcript variant 2, mRNA.				hADA3; FLJ20221; FLJ21329; ADA3	hADA3; FLJ20221; FLJ21329; ADA3
Homo sapiens	RefSeq	NM_006354.2	ILMN_7649	TADA3	NM_133480.1	NM_133480.1		10474	19743893	NM_133480.1	TADA3	NP_597814.1	ILMN_1792176	0003610414	A	1475	GCATACTAAGTCCCTGGAGAGCCGCATCAAGGAGGAGCTAATTGCCCAGG	3	-	9825841-9825890	3p25.3c	Homo sapiens transcriptional adaptor 3 (TADA3), transcript variant 2, mRNA.				hADA3; FLJ20221; FLJ21329; ADA3	hADA3; FLJ20221; FLJ21329; ADA3
Homo sapiens	RefSeq	XM_932076.1	ILMN_45345	LOC642859	XM_932076.1	XM_932076.1		642859	89028355	XM_932076.1	LOC642859	XP_937169.1	ILMN_1724368	0001660187	I	776	GACCTCATCGTCTCTAGTAATTCACGGAAACTTCTTAACTGTTCCAAGAG	8	+	145456222-145456271		PREDICTED: Homo sapiens similar to CG12132-PA, transcript variant 2 (LOC642859), mRNA.					
Homo sapiens	RefSeq	XM_932076.1	ILMN_45345	LOC642859	XM_932076.1	XM_932076.1		642859	89028355	XM_932076.1	LOC642859	XP_937169.1	ILMN_1812100	0006450400	A	201	CACGGAGACTGTGAGGACGTCTTCCTGGACCAGGTGGTGGGCGGGCTGGC	8	+	145455501-145455550		PREDICTED: Homo sapiens similar to CG12132-PA, transcript variant 2 (LOC642859), mRNA.					
Homo sapiens	RefSeq	NR_024622.1	ILMN_370852	C21ORF49	NR_024622.1	NR_024622.1		54067	219277614	NR_024622.1	C21orf49		ILMN_3307211	0005570747	A	663	GCACCAAGTGGGGCAAATACCCCTGGTAACCCATTTATGGAGGCTGCCAC	21	+	34169477-34169526	21q22.11b	Homo sapiens chromosome 21 open reading frame 49 (C21orf49), transcript variant 1, non-coding RNA.					
Homo sapiens	Unigene	Hs.550095	ILMN_110162	HS.550095	Hs.550095		Hs.550095		27838973	BX114636			ILMN_1825389	0001500397	S	344	GGCATGGCTGCTTAGTACAGCACTTCAAAATTCCAGGCTCACGTCGACGC					BX114636 NCI_CGAP_Thy1 Homo sapiens cDNA clone IMAGp998G102840, mRNA sequence					
Homo sapiens	RefSeq	NM_014806.1	ILMN_6879	RUSC2	NM_014806.1	NM_014806.1		9853	55741718	NM_014806.1	RUSC2	NP_055621.1	ILMN_1810037	0002260577	S	5027	GGTGGAGATGAGGATGGGTAACAGTATTGGGGCCAGATCCCTAAGCCCCC	9	+	35551717-35551766	9p13.3b	Homo sapiens RUN and SH3 domain containing 2 (RUSC2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			KIAA0375; Iporin	KIAA0375; Iporin
Homo sapiens	RefSeq	NM_013236.2	ILMN_21384	ATXN10	NM_013236.2	NM_013236.2		25814	51093837	NM_013236.2	ATXN10	NP_037368.1	ILMN_1705900	0006180014	S	2366	AGGTGAATGCCTGTGTCCTCCCCAGCTTCATGCCTCTGTCATGGGGGAAG	22	+	44618896-44618945	22q13.31c	Homo sapiens ataxin 10 (ATXN10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15201271] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 15201271] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [pmid 15201271] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 15201271] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 16385455] [evidence IMP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	E46L; SCA10; FLJ37990	E46L; SCA10; FLJ37990
Homo sapiens	RefSeq	NM_001033582.1	ILMN_21634	PRKCZ	NM_001033582.1	NM_001033582.1		5590	75709227	NM_001033582.1	PRKCZ	NP_001028754.1	ILMN_2253286	0000650711	I	123	TGTGAGCGGGGACTGGTGAGTGTGTGCTGTCTTCAGAGAGAGAAGAGCAG	1	+	2026137-2026186	1p36.33a	Homo sapiens protein kinase C, zeta (PRKCZ), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7925449] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7925449] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7925449] [evidence TAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10477520] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10770953] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4700] [pmid 8224878] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12893243] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11755531] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PKC2	PKC2
Homo sapiens	RefSeq	NM_144566.1	ILMN_7926	ZNF700	NM_144566.1	NM_144566.1		90592	55742735	NM_144566.1	ZNF700	NP_653167.1	ILMN_1807234	0000670209	S	2351	GCTAGCCTGGTTCCTTTTATGGACATGAATAGACTCACACTGGAAGGAAG	19	+	11922064-11922068:11922069-11922113	19p13.2a	Homo sapiens zinc finger protein 700 (ZNF700), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434I1610	DKFZp434I1610
Homo sapiens	RefSeq	NM_144566.1	ILMN_7926	ZNF700	NM_144566.1	NM_144566.1		90592	55742735	NM_144566.1	ZNF700	NP_653167.1	ILMN_2068435	0000020603	S	2665	GTGCCTCGCACCTTCAACGGCATGGAAGGGTTCACACTTGGGAGAAACTC	19	+	11922378-11922427	19p13.2a	Homo sapiens zinc finger protein 700 (ZNF700), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434I1610	DKFZp434I1610
Homo sapiens	RefSeq	NM_007013.3	ILMN_24625	WWP1	NM_007013.3	NM_007013.3		11059	33946331	NM_007013.3	WWP1	NP_008944.1	ILMN_1804328	0001980201	S	3565	ATGCTGCTGGCTTTTCTGAAGACAGGTGCTTGAACTTGTCAGTTTGTTTT	8	+	87479024-87479073	8q21.3a	Homo sapiens WW domain containing E3 ubiquitin protein ligase 1 (WWP1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 9169421] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9169421] [evidence NAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9647693] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 12535537] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which a virion enters a host cell, including virion attachment and penetration [goid 46718] [pmid 12450395] [evidence TAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9169421] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9647693] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	hSDRP1; Tiul1; AIP5; DKFZp434D2111	hSDRP1; Tiul1; AIP5; DKFZp434D2111
Homo sapiens	RefSeq	NM_006734.2	ILMN_162245	HIVEP2	NM_006734.3	NM_006734.3		3097	110347462	NM_006734.3	HIVEP2	NP_006725.3	ILMN_1745447	0006590730	S	9510	GGTGGGAAGAGCATTTGTAGGTCCAGAAGAGTGAAAGAGAGGGAGGGGTG	6	-	143114677-143114726	6q24.2a	Homo sapiens human immunodeficiency virus type I enhancer binding protein 2 (HIVEP2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2247438] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2022670] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MBP-2; MIBP1; HIV-EP2	MBP-2; HIV-EP2; MIBP1
Homo sapiens	RefSeq	NM_199187.1	ILMN_165775	LOC646723	XR_017241.1	XR_017241.1		646723	113416518	XR_017241.1	LOC646723		ILMN_1694778	0006580270	A	798	AGACAAGTACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGTCACCA	5	+	36921862-36921911	5p13.2b	PREDICTED: Homo sapiens similar to Keratin, type I cytoskeletal 18 (Cytokeratin-18) (CK-18) (Keratin-18) (K18) (LOC646723), mRNA.					K18; CYK18
Homo sapiens	RefSeq	NM_212533.1	ILMN_13527	ABCA2	NM_212533.2	NM_212533.2		20	150417979	NM_212533.2	ABCA2	NP_997698.1	ILMN_1687636	0000450333	I	4	ACCGCCTGATCCCGAACTCCCTGTGCAGAGACCAGACTCGCCCGAATATG	9	-	139923321-139923324:139923325-139923370	9q34.3e	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 2 (ABCA2), transcript variant 2, mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 11309290] [evidence IDA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15999530] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12363033] [evidence RCA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11309290] [evidence RCA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISS]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 11178988] [evidence NAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 15238223] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 11178988] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7766993] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 11178988] [evidence NAS]; Any process that modulates the frequency, rate or extent of the directed movement of cholesterol within cells [goid 32383] [pmid 15238223] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 12363033] [evidence TAS]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 15238223] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus [goid 48545] [pmid 15238223] [evidence IEP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 12363033] [evidence RCA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 15999530] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 15999530] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 7766993] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC129761; ABC2	MGC129761; ABC2
Homo sapiens	RefSeq	NM_001606.3	ILMN_13527	ABCA2	NM_212533.2	NM_212533.2		20	150417979	NM_212533.2	ABCA2	NP_997698.1	ILMN_1747627	0002320243	A	7856	GGGCGGAGCTGGGTCAGTCCCGTATTTATTTTGCTTTGAGAAGAGGCTCC	9	-	139901926-139901975	9q34.3e	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 2 (ABCA2), transcript variant 2, mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [pmid 11309290] [evidence IDA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15999530] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12363033] [evidence RCA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11309290] [evidence RCA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence ISS]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 11178988] [evidence NAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 15238223] [evidence IDA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 11178988] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7766993] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 11178988] [evidence NAS]; Any process that modulates the frequency, rate or extent of the directed movement of cholesterol within cells [goid 32383] [pmid 15238223] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 12363033] [evidence TAS]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 15238223] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus [goid 48545] [pmid 15238223] [evidence IEP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 12363033] [evidence RCA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 15999530] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 15999530] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 7766993] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC129761; ABC2	ABC2
Homo sapiens	Unigene	Hs.491292	ILMN_96470	HS.491292	Hs.491292		Hs.491292		21752824	AK093878			ILMN_1844919	0003460735	S	1599	ACCAGACATCTTGACCATTCAGCTAGAACCCTGGCAGCAACAGAGCTATT	8	-	25755710-25755759		Homo sapiens cDNA FLJ36559 fis, clone TRACH2009291					
Homo sapiens	RefSeq	NM_021737.1	ILMN_6195	CLCN6	NM_021737.1	NM_021737.1		1185	12025672	NM_021737.1	CLCN6	NP_068505.1	ILMN_1741594	0002900768	A	3601	GAGAGGCCCAAGGTGGCCTCGCCAGCCCTGCAGTATTGATGTGCAGTATT	1	+	11825515-11825564	1p36.22a	Homo sapiens chloride channel 6 (CLCN6), transcript variant ClC-6d, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8543009] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9224655] [evidence NAS]	The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [pmid 9224655] [evidence NAS]; The directed movement of chloride into, out of, within or between cells [goid 6821] [pmid 8543009] [evidence NAS]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [pmid 8543009] [evidence NAS]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [pmid 9224655] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9224655] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8543009] [evidence NAS]	Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [pmid 8543009] [evidence NAS]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [pmid 9224655] [evidence NAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	KIAA0046; CLC-6	KIAA0046; CLC-6
Homo sapiens	RefSeq	XM_295195.6	ILMN_137324	COL28	XM_295195.6	XM_295195.6		340267	89024796	XM_295195.6	COL28	XP_295195.6	ILMN_1808681	0003800739	S	112	GACTTAATGCCATCCTTGCGTACTGCATCCTGTCCAGGGCTGGTTCCTGC	7	-	7543355-7543385:7545577-7545595	7p21.3e	PREDICTED: Homo sapiens collagen, type XXVIII (COL28), mRNA.					
Homo sapiens	RefSeq	NM_001561.4	ILMN_13404	TNFRSF9	NM_001561.4	NM_001561.4		3604	23510438	NM_001561.4	TNFRSF9	NP_001552.2	ILMN_1813379	0005670440	S	1766	TCTCCATCCTCACACCTTCTGCCTTTGTCCTGCTCCCTTTTAAGCCAGGT	1	-	7979975-7980024	1p36.23b	Homo sapiens tumor necrosis factor receptor superfamily, member 9 (TNFRSF9), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8262389] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 8639902] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8639902] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 8262389] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	CD137; 4-1BB; MGC2172; CDw137; ILA	CD137; 4-1BB; MGC2172; CDw137; ILA
Homo sapiens	RefSeq	NM_007069.1	ILMN_15631	HRASLS3	NM_007069.2	NM_007069.2		11145	142370028	NM_007069.2	HRASLS3	NP_009000.1	ILMN_1667711	0002510593	S	815	GCAAGCGTTGCAGGAATGGGCTTGGCAGCCATGAGCCTTATTGGAGTCAT	11	-	63099026-63099075	11q12.3b-q13.1a	Homo sapiens HRAS-like suppressor 3 (HRASLS3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 9771974] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17374643] [evidence IPI]	HREV107-3; HREV107; H-REV107-1; MGC118754	HREV107-3; HREV107; H-REV107-1; MGC118754
Homo sapiens	RefSeq	XM_932200.1	ILMN_40701	LOC643834	XM_932200.1	XM_932200.1		643834	89034001	XM_932200.1	LOC643834	XP_937293.1	ILMN_1768750	0003780201	I	1531	TGCAGACGGAAAGTACACTTCCACGAGCTGAAGCCAAGAGGCAGAGGCAG	11	+	60735548-60735597	11q12.2b	PREDICTED: Homo sapiens similar to Pepsin A precursor, transcript variant 3 (LOC643834), mRNA.					
Homo sapiens	RefSeq	NM_024504.2	ILMN_21886	PRDM14	NM_024504.2	NM_024504.2		63978	41349468	NM_024504.2	PRDM14	NP_078780.1	ILMN_1815120	0000770634	S	1689	AGAGGTTCACAGCCTCCAGCATACTCCGCACACACATCAGGCAGCACTCC	8	-	71127045-71127093:71130089-71130089	8q13.3a	Homo sapiens PR domain containing 14 (PRDM14), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC59730; PFM11	MGC59730; PFM11
Homo sapiens	RefSeq	NM_006060.2	ILMN_22185	IKZF1	NM_006060.3	NM_006060.3		10320	146261998	NM_006060.3	IKZF1	NP_006051.1	ILMN_1676575	0000730482	S	3532	CCCCGAATTGACAACCCAAACTCTCCAGACATCACCAACTGTCCCCTGCG	7	+	50437632-50437681	7p12.2a	Homo sapiens IKAROS family zinc finger 1 (Ikaros) (IKZF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [pmid 8543809] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion [goid 48732] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Hs.54452; IK1; PRO0758; hIk-1; IKAROS; LYF1; ZNFN1A1	Hs.54452; IK1; PRO0758; hIk-1; IKAROS; LYF1
Homo sapiens	RefSeq	NM_138572.1	ILMN_25567	TBN	NM_138572.1	NM_138572.1		129685	20070377	NM_138572.1	TBN	NP_612639.1	ILMN_1697175	0004260537	S	1446	TCTGGAACTCTGGGGTCTGGTCAGGGAGTGTGTCCTCAGCTTGTCTGGAG	6	+	42162818-42162867	6p21.1f	Homo sapiens taube nuss homolog (mouse) (TBN), mRNA.				TAF8; FLJ32821; TAFII43	TAF8; FLJ32821; TAFII43
Homo sapiens	RefSeq	NM_024098.1	ILMN_27103	CCDC86	NM_024098.1	NM_024098.1		79080	13129103	NM_024098.1	CCDC86	NP_077003.1	ILMN_1792681	0000650300	S	1668	GGGAGCAGAGCTTTTCCCTAGCACCCACTTTCCCAAACCAGTCTCTGCAG	11	+	60374905-60374954	11q12.2a	Homo sapiens coiled-coil domain containing 86 (CCDC86), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]		FLJ22321; MGC2574	FLJ22321; MGC2574
Homo sapiens	RefSeq	XM_927576.1	ILMN_41624	LOC644433	XM_927576.1	XM_927576.1		644433	88943017	XM_927576.1	LOC644433	XP_932669.1	ILMN_1758899	0002260753	S	2682	AAACAGACAGGCAGACAATGTCCATATAGAGTCATAGATACCGTGACAGG	1	-	141788306-141788355		PREDICTED: Homo sapiens hypothetical protein LOC644433 (LOC644433), mRNA.					
Homo sapiens	RefSeq	NM_001024912.1	ILMN_20142	CEACAM1	NM_001024912.1	NM_001024912.1		634	68161540	NM_001024912.1	CEACAM1	NP_001020083.1	ILMN_2371724	0004150014	A	3232	AGGCCTAAGAGGCTTTCTCCAGGAGGATTAGCTTGGAGTTCTCTATACTC	19	-	47703460-47703509	19q13.2c	Homo sapiens carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) (CEACAM1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2457922] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17167768] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15687237] [evidence NAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 15687237] [evidence NAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 15687237] [evidence NAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 15687237] [evidence NAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 15687237] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BGP1; BGPI; BGP	BGPI; BGP; BGP1
Homo sapiens	RefSeq	NM_001024912.1	ILMN_20142	CEACAM1	NM_001024912.1	NM_001024912.1		634	68161540	NM_001024912.1	CEACAM1	NP_001020083.1	ILMN_1716815	0005700753	A	3297	GGTTTTCTAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTG	19	-	47703395-47703444	19q13.2c	Homo sapiens carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) (CEACAM1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2457922] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17167768] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15687237] [evidence NAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 15687237] [evidence NAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 15687237] [evidence NAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 15687237] [evidence NAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 15687237] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BGP1; BGPI; BGP	BGPI; BGP; BGP1
Homo sapiens	RefSeq	NM_207423.1	ILMN_29607	FLJ45983	NM_207423.1	NM_207423.1		399717	46409471	NM_207423.1	FLJ45983	NP_997306.1	ILMN_1679767	0006550372	S	1788	TCGAAGTCCTAAAGTTACTAATCCCGCGGAGGGGGAGAGAGCGTGCCTCG	10	-	8132795-8132832:8132833-8132844	10p14d	Homo sapiens FLJ45983 protein (FLJ45983), mRNA.					
Homo sapiens	RefSeq	NM_007324.2	ILMN_11969	ZFYVE9	NM_007324.2	NM_007324.2		9372	47717111	NM_007324.2	ZFYVE9	NP_015563.2	ILMN_2381994	0005890315	A	2225	CCATTCACCACTCTGGGTGAGGTGGCTCCAGTATGGGTACCGGATTCTCA	1	+	52477730-52477779	1p32.3d	Homo sapiens zinc finger, FYVE domain containing 9 (ZFYVE9), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 12809483] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9865696] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11100470] [evidence EXP]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 12809483] [evidence NAS]; The aggregation, arrangement and bonding together of a ligand-bound type II transforming growth factor beta (TGF-beta) receptor dimer with a type I TGF-beta receptor dimer, following ligand binding, to form a heterotetrameric TGF-beta receptor complex [goid 7181] [pmid 9865696] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins [goid 7183] [pmid 9865696] [evidence TAS];  [goid 7184] [pmid 9865696] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12809483] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9865696] [evidence EXP]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [pmid 9582421] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MADHIP; NSP; SMADIP; SARA	MADHIP; NSP; SMADIP; SARA
Homo sapiens	RefSeq	NM_007323.1	ILMN_11969	ZFYVE9	NM_007324.2	NM_007324.2		9372	47717111	NM_007324.2	ZFYVE9	NP_015563.2	ILMN_1776848	0002650129	A	2239	GGGTGAGGTGGCTCCAGTATGGGTACCGGATTCTCAGGCTCCAAATTGCA	1	+	52477744-52477793	1p32.3d	Homo sapiens zinc finger, FYVE domain containing 9 (ZFYVE9), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 12809483] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9865696] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11100470] [evidence EXP]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 12809483] [evidence NAS]; The aggregation, arrangement and bonding together of a ligand-bound type II transforming growth factor beta (TGF-beta) receptor dimer with a type I TGF-beta receptor dimer, following ligand binding, to form a heterotetrameric TGF-beta receptor complex [goid 7181] [pmid 9865696] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins [goid 7183] [pmid 9865696] [evidence TAS];  [goid 7184] [pmid 9865696] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12809483] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9865696] [evidence EXP]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [pmid 9582421] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MADHIP; NSP; SMADIP; SARA	MADHIP; NSP; SMADIP; SARA
Homo sapiens	Unigene	Hs.583801	ILMN_135982	HS.583801	Hs.583801		Hs.583801		12357934	BF940614			ILMN_1915308	0005890152	S	71	GGTGCTGGGATAATTTGCAAGCCATATGTAGAAGAATGAAACTAGGTCCT					nae23a03.x1 NCI_CGAP_Ov18 Homo sapiens cDNA clone IMAGE:3435940 3 similar to contains L1.t2 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	XM_376372.3	ILMN_44647	LOC134121	XM_376372.4	XM_376372.4		134121	113416412	XM_376372.4	LOC134121	XP_376372.1	ILMN_1782447	0003440619	A	2166	GGTACCCAGTGTGTGCCCCACCCAGTGCCCCGTCATCACAGCAATGACTT	5	-	7884049-7884098	5p15.31a	PREDICTED: Homo sapiens hypothetical protein LOC134121 (LOC134121), mRNA.					
Homo sapiens	RefSeq	NR_002924.2	ILMN_36420	DHX40P	NR_002924.2	NR_002924.2		653645	166063953	NR_002924.2	DHX40P		ILMN_3181406	0006450575	A	479	GATCAACAGAGGAGGATATTTTTGCCACCGCCACCTGGAATTAGAAAATG	17	-	58075549-58075598	17q23.1a	Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 40 pseudogene (DHX40P), non-coding RNA.					
Homo sapiens	RefSeq	XM_938118.1	ILMN_41270	OVOS2	XM_938118.2	XM_938118.2		144203	113423649	XM_938118.2	OVOS2	XP_943211.2	ILMN_1676594	0006060528	S	3233	TGAGAGAGGAGAAGCACCAGGCTTTCCTTGTTCCTGGGCATTGCCTGCCT				12p11.21b	PREDICTED: Homo sapiens ovostatin 2 (OVOS2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 17114] [evidence IEA]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]		
Homo sapiens	RefSeq	XM_934229.1	ILMN_39523	MGC5139	XM_934229.1	XM_934229.1		84747	89035770	XM_934229.1	MGC5139	XP_939322.1	ILMN_1660935	0002450095	A	2959	TCCAGGTGCCTTACGTGTGGCTCTGTCCCTTATGCTGCAGGGGAAAGCTG	12	+	119643980-119644029	12q24.31a	PREDICTED: Homo sapiens hypothetical protein MGC5139, transcript variant 2 (MGC5139), mRNA.					
Homo sapiens	RefSeq	NM_001859.2	ILMN_28027	SLC31A1	NM_001859.2	NM_001859.2		1317	40254457	NM_001859.2	SLC31A1	NP_001850.1	ILMN_1804562	0000380603	S	4114	CCCTTTCAGGCTGTGGGTACTGGTCTTGGGTTCTAGTCATAAGGGGTTCC	9	+	115065989-115066038	9q32c	Homo sapiens solute carrier family 31 (copper transporters), member 1 (SLC31A1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9207117] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [pmid 9207117] [evidence TAS]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]	Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [pmid 9207117] [evidence TAS]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]	hCTR1; COPT1; MGC75487; CTR1	hCTR1; COPT1; MGC75487; CTR1
Homo sapiens	RefSeq	NM_001005240.1	ILMN_28355	OR4F4	NM_001004195.2	NM_001004195.2		26682	57528065	NM_001004195.2	OR4F4	NP_001004195.2	ILMN_1758189	0007160731	S	453	CCAGTTGGCCTTTGCCGTGCACTTACCCTTCTGTGGTCCCAATGAGGTCG	15	-	102462760-102462809	15q26.3d	Homo sapiens olfactory receptor, family 4, subfamily F, member 4 (OR4F4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR4F18; OLA-7501	OR4F19; OR4F18; OR4F11P
Homo sapiens	RefSeq	NM_001004195.2	ILMN_28355	OR4F4	NM_001004195.2	NM_001004195.2		26682	57528065	NM_001004195.2	OR4F4	NP_001004195.2	ILMN_1690200	0001260465	S	646	ATGACCATCCAGCATTGCCCTTTAGATAAGTCGTCCAAAGCTCTGTCCAC	15	-	102462567-102462616	15q26.3d	Homo sapiens olfactory receptor, family 4, subfamily F, member 4 (OR4F4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR4F18; OLA-7501	OR4F18; OLA-7501
Homo sapiens	RefSeq	XM_001715065.1	ILMN_334383	LOC100129543	XM_001715065.1	XM_001715065.1		100129543	169213835	XM_001715065.1	LOC100129543	XP_001715117.1	ILMN_3252446	0007570768	M	2530	GCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCTATTCATGTATTAATT				19p12c	PREDICTED: Homo sapiens hypothetical protein LOC100129543 (LOC100129543), mRNA.					
Homo sapiens	RefSeq	NM_001212.3	ILMN_7884	C1QBP	NM_001212.3	NM_001212.3		708	28872801	NM_001212.3	C1QBP	NP_001203.1	ILMN_1668996	0007200392	S	806	TTGCCGACCGAGGGGTGGACAACACTTTTGCAGATGAGCTGGTGGAGCTC	17	-	5336406-5336455	17p13.2b	Homo sapiens complement component 1, q subcomponent binding protein (C1QBP), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8195709] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8195709] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	gC1qR; HABP1; SF2p32; p32; gC1Q-R; GC1QBP	gC1qR; HABP1; SF2p32; p32; gC1Q-R; GC1QBP
Homo sapiens	RefSeq	NM_152489.1	ILMN_22337	UBE2U	NM_152489.1	NM_152489.1		148581	22749026	NM_152489.1	UBE2U	NP_689702.1	ILMN_1725870	0002690537	S	205	AGGCATTTGGGGACAAGTGTCAGACCCTCCGCTGCCTATCATGCACGGCA	1	+	64442282-64442321:64442322-64442331	1p31.3c	Homo sapiens ubiquitin-conjugating enzyme E2U (putative) (UBE2U), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC35130; RP4-636O23.1	RP4-636O23.1; MGC35130
Homo sapiens	RefSeq	NR_002203.1	ILMN_16227	FTHL8	NR_002203.1	NR_002203.1		2501	56912199	NR_002203.1	FTHL8		ILMN_2233401	0002000592	S	711	CGACAAGCACACCCCGGGGAGACAGTGACAATGAAAGGTAAGCCTCAGGC	X	+	146941934-146941983	Xq28a	Homo sapiens ferritin, heavy polypeptide-like 8 (FTHL8) on chromosome X.					
Homo sapiens	RefSeq	NR_002203.1	ILMN_16227	FTHL8	NR_002203.1	NR_002203.1		2501	56912199	NR_002203.1	FTHL8		ILMN_1696911	0001980594	S	465	CCAGACTGTGATGACTGGGAGCGGGCTGAATGAGATGGAGTGTGCATTAC	X	+	146941688-146941737	Xq28a	Homo sapiens ferritin, heavy polypeptide-like 8 (FTHL8) on chromosome X.					
Homo sapiens	RefSeq	XM_933716.1	ILMN_43785	LOC440345	XM_933716.1	XM_933716.1		440345	89039973	XM_933716.1	LOC440345	XP_938809.1	ILMN_1787746	0000730215	I	5033	GCGTCTCATGATGCAGAGAAAGCCCCAGAGACTCTTAGAACTGCCCTCCA	16	-	21765506-21765555	16p12.1c	PREDICTED: Homo sapiens hypothetical protein LOC440345, transcript variant 5 (LOC440345), mRNA.					
Homo sapiens	RefSeq	NM_012465.2	ILMN_11232	TLL2	NM_012465.2	NM_012465.2		7093	22547222	NM_012465.2	TLL2	NP_036597.1	ILMN_1755158	0002900092	S	6148	AGCAAGCTTGTCCAACCCTTGGCCCAGGACGGCTTTGAATATGGCCCGAC	10	-	98127595-98127644	10q24.1a	Homo sapiens tolloid-like 2 (TLL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC133312; KIAA0932; MGC133313	MGC133312; MGC133313; KIAA0932
Homo sapiens	RefSeq	XM_937203.1	ILMN_36147	LOC648148	XM_937203.1	XM_937203.1		648148	89065631	XM_937203.1	LOC648148	XP_942296.1	ILMN_1797544	0002470537	S	215	ACTACATAAGTGGCCATCAGCGCAACCCAGAGCTCCGAGGGTCCAGTGGG					PREDICTED: Homo sapiens similar to hydrocephalus inducing (LOC648148), mRNA.					
Homo sapiens	RefSeq	NM_207436.1	ILMN_10187	FLJ42957	NM_207436.1	NM_207436.1		400077	46409495	NM_207436.1	FLJ42957	NP_997319.1	ILMN_1732143	0001710477	S	1447	AGCAATCTTGGCCTTTCTAGCTGTGTGACCCCAGGCCGGTCAATCCCTCC	12	+	115457559-115457608	12q24.22a	Homo sapiens FLJ42957 protein (FLJ42957), mRNA.				MGC148154; MGC148155	MGC148154; MGC148155
Homo sapiens	RefSeq	XM_372097.4	ILMN_43678	LOC642373	XM_372097.4	XM_372097.4		642373	89029266	XM_372097.4	LOC642373	XP_372097.4	ILMN_1790984	0001090022	S	5141	TGCACCCATTAACCTATCCCCACCTCTGCCCCACCATTATCTCAGCTGTC	9	+	40330738-40330787	9p12b	PREDICTED: Homo sapiens similar to Contactin-associated protein-like 3 precursor (Cell recognition molecule Caspr3) (LOC642373), mRNA.					
Homo sapiens	RefSeq	NM_005067.5	ILMN_164208	SIAH2	NM_005067.5	NM_005067.5		6478	55925659	NM_005067.5	SIAH2	NP_005058.3	ILMN_1801313	0001980768	S	2189	GTGGGAAAGGGTCCAGATTTTAAAGGTGCTTTAAGGTTGCCCTCTGCCGA	3	-	151941981-151942030	3q25.1b	Homo sapiens seven in absentia homolog 2 (Drosophila) (SIAH2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10207103] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9334332] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 10207103] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10207103] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hSiah2	hSiah2
Homo sapiens	RefSeq	NM_032840.1	ILMN_22383	SPRYD3	NM_032840.1	NM_032840.1		84926	14249553	NM_032840.1	SPRYD3	NP_116229.1	ILMN_1788095	0003180521	S	2477	CTGCTGGGCCTCCCTTTGGCCCTCGCTTCCCACCCTACGATGTATGAAAT	12	-	53458439-53458488	12q13.13e	Homo sapiens SPRY domain containing 3 (SPRYD3), mRNA.				FLJ14800	FLJ14800
Homo sapiens	RefSeq	XM_001718633.1	ILMN_343444	LOC100133695	XM_001718633.1	XM_001718633.1		100133695	169214019	XM_001718633.1	LOC100133695	XP_001718685.1	ILMN_3285607	0004060739	M	1039	GCATCATTTCCAGCACCGCCAACCAGACACAGTCCTCTCCAAAGGCCAGC					PREDICTED: Homo sapiens similar to hCG2008618 (LOC100133695), mRNA.					
Homo sapiens	RefSeq	XM_001718633.1	ILMN_343444	LOC100133695	XM_001718633.1	XM_001718633.1		100133695	169214019	XM_001718633.1	LOC100133695	XP_001718685.1	ILMN_3209098	0002070102	A	28	CCATGGCGGAGGCCCGAGTCTCCCAGCCTGGGGCATCTCCACGCTCTGTA					PREDICTED: Homo sapiens similar to hCG2008618 (LOC100133695), mRNA.					
Homo sapiens	Unigene	Hs.559834	ILMN_113881	HS.559834	Hs.559834		Hs.559834		23284326	BU618111			ILMN_1869915	0001990184	S	360	GACACTACCAAATGCTGGTGGGAATGTAGAGCAAGTAGAACTCTCAGATG					UI-H-DF0-beu-j-10-0-UI.s1 NCI_CGAP_DF0 Homo sapiens cDNA clone UI-H-DF0-beu-j-10-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.385749	ILMN_89098	HS.385749	Hs.385749		Hs.385749		23349106	BC038187			ILMN_1829664	0001070066	S	368	GCTGCCTGCCCGCACACTCTTTACGGCAGAAGCAGTGACATTTCCCTTGC	2	+	536376-536425		Homo sapiens, clone IMAGE:3451264, mRNA					
Homo sapiens	RefSeq	XM_941974.1	ILMN_39509	LOC652505	XM_941974.1	XM_941974.1		652505	89062935	XM_941974.1	LOC652505	XP_947067.1	ILMN_1686885	0006220035	S	45	CCAGGGACAGGGACAGCGAAGGAGAATCGTTTGGACCCTGAGCAAAAGCG					PREDICTED: Homo sapiens similar to double homeobox 4c (LOC652505), mRNA.					
Homo sapiens	RefSeq	NM_014652.2	ILMN_10123	IPO13	NM_014652.2	NM_014652.2		9670	41281424	NM_014652.2	IPO13	NP_055467.2	ILMN_1651229	0002510494	S	3437	ACAAGAGGCGGGTGAAGGAGATGGTGAAGGAGTTCACACTGCTGTGCCGG	1	+	44205856-44205905	1p34.1f	Homo sapiens importin 13 (IPO13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	RANBP13; KIAA0724; IMP13; KAP13	KIAA0724; RANBP13; IMP13; KAP13
Homo sapiens	Unigene	Hs.300262	ILMN_85344	HS.300262	Hs.300262		Hs.300262		51477606	XM_379702			ILMN_1905593	0006200059	S	2090	GTAAGCAAGCACAGGAATCTGAAAAACCACAGGCCCACTAATTTGCCTGC					PREDICTED: Homo sapiens hypothetical LOC401585 (LOC401585), mRNA					
Homo sapiens	RefSeq	NM_004239.1	ILMN_402	TRIP11	NM_004239.1	NM_004239.1		9321	10863904	NM_004239.1	TRIP11	NP_004230.1	ILMN_1658144	0002760136	S	6239	GCCAGCGTTACCTGACAACAGTGCTGGGGTTGTGCTGAAAGACCTTTTAA	14	-	91505778-91505827	14q32.12a	Homo sapiens thyroid hormone receptor interactor 11 (TRIP11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9256431] [evidence TAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9256431] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17438371] [evidence IPI]	TRIP230; GMAP-210; CEV14	TRIP230; GMAP-210; CEV14
Homo sapiens	RefSeq	NM_001130407.1	ILMN_366076	PRR20E	NM_001130407.1	NM_001130407.1		729250	194353954	NM_001130407.1	PRR20E	NP_001123879.1	ILMN_3246286	0002760017	S	307	AGCCAGGCTGCTGTGTTGCGGACCCTGAAGGCTCCGTGGAAGCAGATGGG	13	+	57742812-57742861	13q21.1d	Homo sapiens proline rich 20E (PRR20E), mRNA.					
Homo sapiens	RefSeq	NM_014564.2	ILMN_169960	LHX3	NM_014564.2	NM_014564.2		8022	30089942	NM_014564.2	LHX3	NP_055379.1	ILMN_2390435	0001570615	A	2122	TCTGCCAGCCCCAGATTGGGAAGTCTCCCCGCTGGAGAAGGGTGGGGCTC	9	-	139088327-139088376	9q34.3d	Homo sapiens LIM homeobox 3 (LHX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10598593] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10598593] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10903894] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10598593] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	M2-LHX3; DKFZp762A2013	M2-LHX3; DKFZp762A2013
Homo sapiens	RefSeq	NM_014564.2	ILMN_169960	LHX3	NM_014564.2	NM_014564.2		8022	30089942	NM_014564.2	LHX3	NP_055379.1	ILMN_2284893	0006180161	I	47	CTATTGCGGGGTGGCGTCGCTGGGCCCGGGAAAGTTCGGGACTGGAGAGT	9	-	139094908-139094957	9q34.3d	Homo sapiens LIM homeobox 3 (LHX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10598593] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10598593] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10903894] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10598593] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	M2-LHX3; DKFZp762A2013	M2-LHX3; DKFZp762A2013
Homo sapiens	RefSeq	NM_178867.3	ILMN_1940	SFXN4	NM_178867.3	NM_178867.3		119559	42542387	NM_178867.3	SFXN4	NP_849198.2	ILMN_1770848	0003060121	I	999	TCCTACTGCTGGGTGTGGGAGGTGCTTGATGAAATGAGATCTGCAAATTG	10	-	120891781-120891830	10q26.11c	Homo sapiens sideroflexin 4 (SFXN4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	BCRM1	BCRM1
Homo sapiens	RefSeq	XM_001714288.1	ILMN_339997	LOC648152	XM_001714288.1	XM_001714288.1		648152	169165925	XM_001714288.1	LOC648152	XP_001714340.1	ILMN_3239595	0006420112	S	121	ATGGTGGAAATTCTTGCTTCTCTTCAGAAACCAAAGAAGATTTCTTTAAA					PREDICTED: Homo sapiens similar to ataxia telangiectasia and Rad3 related protein (LOC648152), partial mRNA.					
Homo sapiens	RefSeq	XM_942702.1	ILMN_37390	LOC284371	XM_942702.1	XM_942702.1		284371	89057680	XM_942702.1	LOC284371	XP_947795.1	ILMN_1744395	0007210368	A	3108	AAAATTAGCTGGGCTTCGTGGCGGGTACTGGTAGTACCAGCTACTCGAGA				19q13.33e	PREDICTED: Homo sapiens hypothetical protein LOC284371, transcript variant 4 (LOC284371), mRNA.					
Homo sapiens	RefSeq	XM_001715577.1	ILMN_339329	LOC100130351	XM_001715577.1	XM_001715577.1		100130351	169170141	XM_001715577.1	LOC100130351	XP_001715629.1	ILMN_3231538	0000020138	I	5	AGTTGCTGTTTCATCATGGGGGTACTGTGGACAAACCCAGGGCTGCTGGT	7	+	65951041-65951090	7q11.21e	PREDICTED: Homo sapiens hypothetical protein LOC100130351 (LOC100130351), mRNA.					
Homo sapiens	RefSeq	NM_133465.1	ILMN_17353	KIAA1958	NM_133465.2	NM_133465.2		158405	141803104	NM_133465.2	KIAA1958	NP_597722.1	ILMN_1769140	0000130048	S	2439	GGCTCTCCCCTGGTGTGGCCTGCCCTCCCTTTGACTTGGGGTTTGCTTTT	9	+	114462283-114462332	9q32a-q32b	Homo sapiens KIAA1958 (KIAA1958), mRNA.				MGC142075; FLJ39294	MGC142075; FLJ39294
Homo sapiens	RefSeq	XM_166320.6	ILMN_41770	KIAA1553	XM_166320.6	XM_166320.6		57673	88997653	XM_166320.6	KIAA1553	XP_166320.3	ILMN_1726642	0000990068	I	30	TCCCTTCCCGGCCGTTCCACGGCGGTTCGCGGTTCCCGCTGCCCAGGAGC	6	-	107542250-107542299	6q21c	PREDICTED: Homo sapiens KIAA1553 (KIAA1553), mRNA.					
Homo sapiens	RefSeq	NM_001006626.1	ILMN_16081	CHRM2	NM_001006626.1	NM_001006626.1		1129	54792104	NM_001006626.1	CHRM2	NP_001006627.1	ILMN_1761574	0006760564	I	223	GATCTTATACTCCTGGCCTCAAGTGATCCTCCTGCCTCAGTCTCCAAAAG	7	+	136286302-136286351	7q33d	Homo sapiens cholinergic receptor, muscarinic 2 (CHRM2), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3443095] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3037705] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 8139539] [evidence TAS]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7207] [pmid 2739737] [evidence TAS]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 2739737] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 10544184] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4981] [pmid 9603968] [evidence TAS]	MGC120006; FLJ43243; MGC120007; HM2	MGC120006; FLJ43243; MGC120007; HM2
Homo sapiens	RefSeq	NM_130441.2	ILMN_28450	CLEC4C	NM_130441.2	NM_130441.2		170482	45580689	NM_130441.2	CLEC4C	NP_569708.1	ILMN_1665457	0005960136	I	536	GTGGTTCCAGTTGAAGGTCTGGTCCATGGCAGTCGTATCCATCTTGCTCC	12	-	7898956-7899005	12p13.31c	Homo sapiens C-type lectin domain family 4, member C (CLEC4C), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLECSF7; BDCA2; CD303; DLEC; CLECSF11; PRO34150; MGC125793; HECL; MGC125792; MGC125789; MGC125791	CLECSF7; BDCA2; CD303; DLEC; CLECSF11; PRO34150; MGC125793; HECL; MGC125792; MGC125789; MGC125791
Homo sapiens	RefSeq	NM_001025080.1	ILMN_23203	CD47	NM_198793.2	NM_198793.2		961	68223313	NM_198793.2	CD47	NP_942088.1	ILMN_1771333	0004150193	A	4793	CTCCAGTGTTGCTATGTGCAAGATCCTCTCTTGGAGCTTTTTTGCATAGC	3	-	109245076-109245125	3q13.12b	Homo sapiens CD47 molecule (CD47), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16691243] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10429193] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7998989] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 8294396] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 15383453] [evidence IDA]; Any process that activates or increases the rate or extent of cell adhesion to another cell [goid 22409] [pmid 15383453] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 15383453] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383453] [evidence IPI]	OA3; MER6; IAP	MER6; OA3; IAP
Homo sapiens	RefSeq	NM_013976.2	ILMN_9055	GCDH	NM_013976.2	NM_013976.2		2639	50959158	NM_013976.2	GCDH	NP_039663.1	ILMN_1797482	0004060731	A	1194	AATAACTGTGGGAAAGCCCTGGACATCGCCCGCCAGGCCCGAGACATGCT	19	+	12869551-12869600	19p13.13c	Homo sapiens glutaryl-Coenzyme A dehydrogenase (GCDH), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8541831] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: glutaryl-CoA + acceptor = crotonoyl-CoA + CO2 + reduced acceptor [goid 4361] [pmid 8541831] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	GCD; ACAD5	GCD; ACAD5
Homo sapiens	RefSeq	XM_001716791.1	ILMN_340391	LOC100130472	XM_001716791.1	XM_001716791.1		100130472	169168102	XM_001716791.1	LOC100130472	XP_001716843.1	ILMN_3182936	0004070477	A	845	GTGGGTTCTTCCCTTACTACCGCTCTGAGGAGGAGAGTTTGCCCAGCCTG				5q31.1f	PREDICTED: Homo sapiens hypothetical protein LOC100130472 (LOC100130472), mRNA.					
Homo sapiens	RefSeq	NM_006633.1	ILMN_162858	IQGAP2	NM_006633.2	NM_006633.2		10788	116089336	NM_006633.2	IQGAP2	NP_006624.2	ILMN_1769433	0004220440	S	5587	AGTGACTAAGGAACAACATAGATAGTGAGCATAGTCCCCACCTCCACCCC	5	+	75969787-75969836	5q13.3d	Homo sapiens IQ motif containing GTPase activating protein 2 (IQGAP2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 8756646] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8756646] [evidence TAS]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8756646] [evidence TAS]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [pmid 8756646] [evidence TAS]; Increases the rate of GTP hydrolysis by a GTPase of the Ras superfamily [goid 5099] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]		
Homo sapiens	Unigene	Hs.569901	ILMN_122082	HS.569901	Hs.569901		Hs.569901		78464581	DA128369			ILMN_1883921	0001710750	S	308	TCTCCATCTCAATCTTCTTTGCCACGTCATGCATGCCCTTGAAGCATTAG	18	+	20600445-20600494		DA128369 BRACE3 Homo sapiens cDNA clone BRACE3051924 5, mRNA sequence					
Homo sapiens	RefSeq	NM_024076.1	ILMN_7565	KCTD15	NM_024076.1	NM_024076.1		79047	13129063	NM_024076.1	KCTD15	NP_076981.1	ILMN_1786326	0003130196	S	3244	GCGGGGCTCCCCAGCCATCACCATCCTGTGTACAATGGCTGTAGACTTGT	19	+	38996834-38996883	19q13.11b	Homo sapiens potassium channel tetramerisation domain containing 15 (KCTD15), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC2628; MGC25497	MGC2628; MGC25497
Homo sapiens	RefSeq	XR_001224.1	ILMN_9158	PRO0132	NR_002763.1	NR_002763.1		29034	84872040	NR_002763.1	PRO0132		ILMN_1719963	0006130100	A	1678	GGAGCCAGAGATTGGTGCGCAGTCCTCCCCACTGTAGAATCAGACGTACA	2	+	211192217-211192266	2q34c	Homo sapiens PRO0132 protein (PRO0132) on chromosome 2.					
Homo sapiens	RefSeq	NM_020362.2	ILMN_14240	C1ORF128	NM_020362.3	NM_020362.3		57095	142369811	NM_020362.3	C1orf128	NP_065095.2	ILMN_1784207	0000270133	S	1265	GTCAAGTTGCCCAGCTTGGAGTTGTCTGTCACGCACATGTGTCCTGTGGT	1	+	23986959-23987008	1p36.11d	Homo sapiens chromosome 1 open reading frame 128 (C1orf128), mRNA.				TXNL1CL; HT014; RP5-886K2.4	TXNL1CL; HT014; RP5-886K2.4
Homo sapiens	RefSeq	XM_938380.1	ILMN_34718	LOC649313	XM_938380.1	XM_938380.1		649313	89025991	XM_938380.1	LOC649313	XP_943473.1	ILMN_1798882	0004900274	S	91	AGCTCACAACTTAGAGTCTGCATACTCTAACTCTGGGGGAGTTGTATTGA					PREDICTED: Homo sapiens hypothetical protein LOC649313 (LOC649313), mRNA.					
Homo sapiens	RefSeq	XR_041083.1	ILMN_335349	LOC282997	XR_041083.1	XR_041083.1		282997	169201184	XR_041083.1	LOC282997		ILMN_3199489	0001050255	A	2614	CAAGGTTGGGCCAGACACTCAGGAAATAGGGTTGTCGTCCTACCTCCCCC				10q25.2a	PREDICTED: Homo sapiens misc_RNA (LOC282997), miscRNA.					
Homo sapiens	RefSeq	NM_002416.1	ILMN_12602	CXCL9	NM_002416.1	NM_002416.1		4283	4505186	NM_002416.1	CXCL9	NP_002407.1	ILMN_1745356	0005570278	S	2052	TGATTGGTGCCCAGTTAGCCTCTGCAGGATGTGGAAACCTCCTTCCAGGG	4	-	77142090-77142139	4q21.1a	Homo sapiens chemokine (C-X-C motif) ligand 9 (CXCL9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8476424] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10903763] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10903763] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 10570316] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10201901] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10201891] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10903763] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8476424] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10903763] [evidence TAS]	MIG; crg-10; Humig; SCYB9; CMK	MIG; crg-10; Humig; SCYB9; CMK
Homo sapiens	RefSeq	XR_041744.1	ILMN_348142	FLJ32063	XR_041744.1	XR_041744.1		150538	169163441	XR_041744.1	FLJ32063		ILMN_3191756	0000940647	A	2468	CGTACACCTGTGCTGAACGGCCAGAGACTTCCTGGTCAATACTCCCACAG	2	+	200045291-200045340	2q33.1d	PREDICTED: Homo sapiens misc_RNA (FLJ32063), miscRNA.					
Homo sapiens	RefSeq	XR_041744.1	ILMN_348142	FLJ32063	XR_041744.1	XR_041744.1		150538	169163441	XR_041744.1	FLJ32063		ILMN_3268228	0001500220	M	2750	GGAACTCTCCTCTTCTTACTCTCAGTCCAGTAAGTTTGACTACAGAGCAC	2	+	200045573-200045622	2q33.1d	PREDICTED: Homo sapiens misc_RNA (FLJ32063), miscRNA.					
Homo sapiens	RefSeq	NM_213600.2	ILMN_26004	PLA2G4F	NM_213600.2	NM_213600.2		255189	67972428	NM_213600.2	PLA2G4F	NP_998765.2	ILMN_1744211	0003360064	S	3277	GATGTGCGCGTGTCTCCCTGCCAGTTACCCAGGCTTCACTCTTCGAACCT	15	-	42433468-42433517	15q15.1d	Homo sapiens phospholipase A2, group IVF (PLA2G4F), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of a glycerophospholipid [goid 4620] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PLA2G4F/Z; DKFZp781B229; DKFZp666G192	PLA2G4F/Z; DKFZp781B229; DKFZp666G192
Homo sapiens	RefSeq	NM_004076.3	ILMN_162325	CRYBB3	NM_004076.3	NM_004076.3		1417	12056466	NM_004076.3	CRYBB3	NP_004067.1	ILMN_1718929	0004920280	S	694	TTCCCCAGCAGCTGAAAGGCACCCAGACTTCAAGGACCCAGACCCACCCT	22	+	23933165-23933179:23933180-23933214	22q11.23c	Homo sapiens crystallin, beta B3 (CRYBB3), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 8999933] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	MGC125774; CRYB3; CATCN2; MGC125772; MGC125773	MGC125774; CRYB3; CATCN2; MGC125772; MGC125773
Homo sapiens	RefSeq	NM_024336.1	ILMN_4354	IRX3	NM_024336.1	NM_024336.1		79191	39930458	NM_024336.1	IRX3	NP_077312.1	ILMN_1811468	0005690408	S	1874	GAACCATCTGGACGCCGCCCTGGTCTTATCGGCTCTCTCCTCATCCTAGT	16	-	52875097-52875098:52875099-52875146	16q12.2b	Homo sapiens iroquois homeobox 3 (IRX3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	IRX-1	IRX-1
Homo sapiens	RefSeq	XM_377527.3	ILMN_40713	LOC401911	XM_377527.3	XM_377527.3		401911	89056758	XM_377527.3	LOC401911	XP_377527.3	ILMN_1720499	0003850612	A	1	ATGCCTGCTGTCCTAGGTACAGACAGGGCCAAGTCCAAGAACCATACCAC	19	-	39479459-39479493:39479657-39479671	19q13.11c	PREDICTED: Homo sapiens similar to 60S ribosomal protein L29 (Cell surface heparin binding protein HIP) (LOC401911), mRNA.					
Homo sapiens	RefSeq	NM_013974.1	ILMN_2018	DDAH2	NM_013974.1	NM_013974.1		23564	7524353	NM_013974.1	DDAH2	NP_039268.1	ILMN_1770787	0005360041	S	986	GTGGAGGTGGGGATCTGCCCAACAGCCAGGAGGCACTGCAGAAGCTCTCT	6	-	31803091-31803109:31803299-31803329	6p21.33a	Homo sapiens dimethylarginine dimethylaminohydrolase 2 (DDAH2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [pmid 10493931] [evidence TAS]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [pmid 10493931] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; A series of molecular signals mediated by the detection of nitric oxide (NO) [goid 7263] [pmid 10493931] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]; Catalysis of the reaction: N(G),N(G)-dimethyl-L-arginine + H2O = dimethylamine + L-citrulline [goid 16403] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2 [goid 16813] [evidence IEA]	DDAHII; NG30; G6a; DDAH	DDAHII; DDAH; NG30; G6a
Homo sapiens	Unigene	Hs.550275	ILMN_110251	HS.550275	Hs.550275		Hs.550275		6142582	AW138182			ILMN_1834233	0004250746	S	414	CTGAGCTCTGCTAGCCTCTGCAGCTGGTTAACGGGAGAATGGTGTGGAGA	11	+	46832696-46832745		UI-H-BI1-acy-f-03-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2716156 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016292.1	ILMN_12336	TRAP1	NM_016292.1	NM_016292.1		10131	7706484	NM_016292.1	TRAP1	NP_057376.1	ILMN_1699737	0004670092	S	1920	AGCCCACGCTGGAGATCAACCCCAGGCACGCGCTCATCAAGAAGCTGAAT	16	-	3648842-3648867:3651989-3652012	16p13.3c	Homo sapiens TNF receptor-associated protein 1 (TRAP1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [pmid 7876093] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	HSP75; HSP90L	HSP75; HSP90L
Homo sapiens	RefSeq	XM_938345.1	ILMN_36211	FLJ44606	XM_943643.2	XM_943643.2		401207	113417213	XM_943643.2	FLJ44606	XP_948736.1	ILMN_1682256	0006400487	A	314	CAACCCTACAAGGATCAGAAGCTGCCAGGAACAAGGAGAAGACGCTCCCC				5q23.2f	PREDICTED: Homo sapiens hypothetical gene supported by AK126569, transcript variant 5 (FLJ44606), mRNA.					
Homo sapiens	RefSeq	NM_003320.3	ILMN_12675	TUB	NM_003320.3	NM_003320.3		7275	29826280	NM_003320.3	TUB	NP_003311.2	ILMN_1810227	0003450170	I	280	TTTCTTTGCCGAGACAGGGATTTTGTTCCCAGGAGGCACTCCCTGGCCCA	11	+	8017035-8017084	11p15.4b	Homo sapiens tubby homolog (mouse) (TUB), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11000483] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11000483] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [evidence IEA]	rd5	rd5
Homo sapiens	RefSeq	NM_176787.3	ILMN_163610	PIGN	NM_176787.3	NM_176787.3		23556	110224472	NM_176787.3	PIGN	NP_789744.1	ILMN_2263829	0003850280	I	339	CAAATTACACACTGGCTTGGAAAGTACTCCCATGTTCCGTTTGATCTTGG				18q21.33a	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class N (PIGN), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10069808] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [pmid 10069808] [evidence EXP]	MCD4; MDC4; PIG-N; MGC26427	MCD4; MDC4; PIG-N; MGC26427
Homo sapiens	RefSeq	NM_176787.3	ILMN_163610	PIGN	NM_176787.3	NM_176787.3		23556	110224472	NM_176787.3	PIGN	NP_789744.1	ILMN_2352724	0003890653	A	3523	CAGCAATCTGGTCCCCAGTCGCACAACTTCCCACATACCCAGAGGAGAGC				18q21.33a	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class N (PIGN), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10069808] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [pmid 10069808] [evidence EXP]	MCD4; MDC4; PIG-N; MGC26427	MCD4; MDC4; PIG-N; MGC26427
Homo sapiens	RefSeq	NM_006319.2	ILMN_25773	CDIPT	NM_006319.3	NM_006319.3		10423	116812598	NM_006319.3	CDIPT	NP_006310.1	ILMN_1770425	0000990161	A	1537	CAGATATTCTTGGCTCAGGGCCTGGGTTGAGGGAGCTTAGGGAAGGACGT	16	-	29869965-29870014	16p11.2d	Homo sapiens CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (CDIPT), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + myo-inositol = CMP + phosphatidyl-1D-myo-inositol [goid 3881] [evidence IEA]; Enables the directed movement of phosphatidylinositol into, out of, within or between cells. Phosphatidylinositol refers to any glycophospholipids with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 8526] [pmid 9407135] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + myo-inositol = CMP + phosphatidyl-1D-myo-inositol [goid 3881] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]	PIS1; PIS; MGC1328	PIS1; PIS; MGC1328
Homo sapiens	RefSeq	XM_374787.5	ILMN_31563	CCNYL2	XM_374787.5	XM_374787.5		414194	169190406	XM_374787.5	CCNYL2	XP_374787.5	ILMN_3255636	0003120241	M	1275	CTACTTCGATCTTCGCACCTTGGCACACAACAACGGCCTGTATTCACCAG	10	-	42227190-42227239	10q11.21a	PREDICTED: Homo sapiens cyclin Y-like 2 (CCNYL2), mRNA.					
Homo sapiens	Unigene	Hs.539564	ILMN_104592	HS.539564	Hs.539564		Hs.539564		4606908	AI597860			ILMN_1880612	0007100369	S	181	CTGGGGAGCCTGTCCCAGGAACACCATGGCTGCTCAACACTTCCTTGAAC	13	-	110173456-110173505		tu53c10.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:2254770 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001004456.1	ILMN_19214	OR1M1	NM_001004456.1	NM_001004456.1		125963	52218827	NM_001004456.1	OR1M1	NP_001004456.1	ILMN_1766401	0005810593	S	612	GATGGTGATAGCCACGCCCTTTGTCTGCATCCTGGCCTCCTATGCTCGCA	19	+	9065532-9065581	19p13.2d	Homo sapiens olfactory receptor, family 1, subfamily M, member 1 (OR1M1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR19-6; OR19-5	OR19-6; OR19-5
Homo sapiens	RefSeq	XM_941952.1	ILMN_37311	LOC652491	XM_941952.1	XM_941952.1		652491	89062894	XM_941952.1	LOC652491	XP_947045.1	ILMN_1777805	0004860484	S	105	GTGGTACTTGGGCTACCCGGGGGACCAGTGGTCTTCGGGCTTCTCCTACA					PREDICTED: Homo sapiens hypothetical LOC652491 (LOC652491), mRNA.					
Homo sapiens	RefSeq	NM_001010925.1	ILMN_5877	ANKRD19	NM_001010925.2	NM_001010925.2		138649	109389360	NM_001010925.2	ANKRD19	NP_001010925.1	ILMN_1666221	0002480040	S	2504	TCTTTTGGCCTTTCCCCAATGCTTGAAAGAAGATCACCACTGCTGGAGGC				9q22.31b	Homo sapiens ankyrin repeat domain 19 (ANKRD19), mRNA.				FLJ36178; bA526D8.2	FLJ36178; bA526D8.2
Homo sapiens	RefSeq	NM_173042.2	ILMN_30884	IL18BP	NM_173042.2	NM_173042.2		10068	89111126	NM_173042.2	IL18BP	NP_766630.2	ILMN_2334296	0002190717	A	2103	GCAGCTGCTTCGGATCCACACTGTATCTGTGTCATCCCCACATGGGTCCT	11	+	71391151-71391200	11q13.4a	Homo sapiens interleukin 18 binding protein (IL18BP), transcript variant A, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10023777] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [pmid 10023777] [evidence IDA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with interleukin-18 [goid 42007] [pmid 10023777] [evidence IDA]; Interacts with receptors to reduce the action of another ligand, the agonist [goid 48019] [pmid 11890646] [evidence TAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	IL18BPa	IL18BPa
Homo sapiens	RefSeq	NM_173042.2	ILMN_30884	IL18BP	NM_173042.2	NM_173042.2		10068	89111126	NM_173042.2	IL18BP	NP_766630.2	ILMN_2253759	0001850471	I	763	TCCAGGCTATGCTACGGGAGGAGAAGCCAGCTACTGAGGAAAAGCCAGCT	11	+	71388519-71388568	11q13.4a	Homo sapiens interleukin 18 binding protein (IL18BP), transcript variant A, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10023777] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [pmid 10023777] [evidence IDA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with interleukin-18 [goid 42007] [pmid 10023777] [evidence IDA]; Interacts with receptors to reduce the action of another ligand, the agonist [goid 48019] [pmid 11890646] [evidence TAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	IL18BPa	IL18BPa
Homo sapiens	RefSeq	NM_020547.1	ILMN_30245	AMHR2	NM_020547.1	NM_020547.1		269	10198655	NM_020547.1	AMHR2	NP_065434.1	ILMN_1736412	0005420152	S	1748	AAGGCCCTTGTTCCAGGAATCCTCAGCCTGCCTGTACCCTTTCTCCTGTG	12	+	52111472-52111521	12q13.13e	Homo sapiens anti-Mullerian hormone receptor, type II (AMHR2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process by which the Mullerian ducts, primordia of the oviducts, uterus and upper vagina, undergo regression in male embryos [goid 1880] [pmid 14750901] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7493017] [evidence IMP]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence ISS]; The establishment of the sex of an organism by physical differentiation [goid 7548] [pmid 12834017] [evidence TAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7493017] [evidence IMP];  [goid 5071] [pmid 12462075] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any hormone, naturally occurring substances secreted by specialized cells that affect the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42562] [pmid 14750901] [evidence IPI]	AMHR; MISRII	AMHR; MISRII
Homo sapiens	RefSeq	XM_001725169.1	ILMN_345758	LOC100130633	XM_001725169.1	XM_001725169.1		100130633	169161546	XM_001725169.1	LOC100130633	XP_001725221.1	ILMN_3265343	0001110707	M	342	CCTTGGCAGCTCTGAAAGAGTCACTAAGCACCTGTATCCCAGCCATTGTC				1p34.3f	PREDICTED: Homo sapiens similar to ZMYM6 protein (LOC100130633), mRNA.					
Homo sapiens	Unigene	Hs.473425	ILMN_95248	HS.473425	Hs.473425		Hs.473425		21391487	AY063452			ILMN_1909784	0004010370	S	94	AGGCACCTCGCCCTGACTGGTAAAGCAAAGAAACTGGATAGGAGAAGGCC	21	-	18081286-18081335		Homo sapiens D21S2089E form A mRNA sequence					
Homo sapiens	RefSeq	XM_938288.1	ILMN_31302	LOC390998	XM_938288.2	XM_938288.2		390998	113411918	XM_938288.2	LOC390998	XP_943381.2	ILMN_1788170	0003400162	A	515	GTGCGGGCCCCTCCAGGTGTAGGCTTCAGACAGGCATGCAAGTTGCCTTT				1p36.22a	PREDICTED: Homo sapiens similar to 60S ribosomal protein L10 (QM protein) (Tumor suppressor QM) (Laminin receptor homolog) (LOC390998), mRNA.					
Homo sapiens	RefSeq	NM_033405.2	ILMN_10778	PRIC285	NM_033405.2	NM_033405.2		85441	34335259	NM_033405.2	PRIC285	NP_208384.2	ILMN_1787509	0005960343	S	7329	AGCCTGCTCGGCTGTATGTTTCTCGCACGCTCACCCGCTTCAGTGCGGCT	20	-	61660011-61660060	20q13.33e	Homo sapiens peroxisomal proliferator-activated receptor A interacting complex 285 (PRIC285), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC138228; PDIP-1; PDIP1alpha; KIAA1769; PDIP1beta; MGC132634; FLJ00244	MGC138228; PDIP-1; PDIP1alpha; KIAA1769; PDIP1beta; MGC132634; FLJ00244
Homo sapiens	Unigene	Hs.547332	ILMN_109506	HS.547332	Hs.547332		Hs.547332		28363383	CB241739			ILMN_1828721	0004810711	S	566	CCAAGCTCACACAGCTAAAATCTGGTGGAACCATAACTACCCCTCGTGCC					UI-CF-FN0-afz-b-04-0-UI.s1 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-afz-b-04-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001017991.1	ILMN_16652	H2AFB2	NM_001017991.1	NM_001017991.1		474381	63029942	NM_001017991.1	H2AFB2	NP_001017991.1	ILMN_2226763	0006350056	S	190	ACGGCCAAGGTCCTGGAGCTGGCGGGCAACGAGGCCCAGAACAGCGGAGA	X	+	154263819-154263868	Xq28h	Homo sapiens H2A histone family, member B2 (H2AFB2), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2A.Bbd	H2A.Bbd
Homo sapiens	RefSeq	NM_014906.3	ILMN_27552	PPM1E	NM_014906.3	NM_014906.3		22843	30089947	NM_014906.3	PPM1E	NP_055721.3	ILMN_1708508	0006280059	S	6271	CTCTTACTCTAGGTGCTCTTTGGTGAGAGACAGGCTTTGTTCTCTTGTTC	17	+	54417050-54417099	17q22d	Homo sapiens protein phosphatase 1E (PP2C domain containing) (PPM1E), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	KIAA1072; DKFZp781F1422; PP2CH; POPX1	KIAA1072; DKFZp781F1422; PP2CH; POPX1
Homo sapiens	RefSeq	XM_001715945.1	ILMN_344516	LOC729774	XM_001715945.1	XM_001715945.1		729774	169212922	XM_001715945.1	LOC729774	XP_001715997.1	ILMN_3302484	0001430209	M	115	ATCTTTGCCAGGACCAAGATAGACCCCAGCGCCTTGGTGCAGAAGCTGGA				18p11.21b	PREDICTED: Homo sapiens hypothetical LOC729774 (LOC729774), mRNA.					
Homo sapiens	RefSeq	XM_001715945.1	ILMN_344516	LOC729774	XM_001715945.1	XM_001715945.1		729774	169212922	XM_001715945.1	LOC729774	XP_001715997.1	ILMN_3225894	0004220543	A	534	CAGAGCCAGCACCCTGGTGGCCATCGGGCAGACGCTGGCCCGGCAGATGC				18p11.21b	PREDICTED: Homo sapiens hypothetical LOC729774 (LOC729774), mRNA.					
Homo sapiens	Unigene	Hs.568837	ILMN_121018	HS.568837	Hs.568837		Hs.568837		3181041	AA994496			ILMN_1902027	0005050692	S	321	CAGCTACAGCAGCCACAGACGGGGCCATGCAGCAGAGTCCAGATGGTTTT	10	-	13792421-13792470		ou17h02.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1626579 3, mRNA sequence					
Homo sapiens	RefSeq	XR_040008.1	ILMN_337464	LOC644189	XR_040008.1	XR_040008.1		644189	169213887	XR_040008.1	LOC644189		ILMN_3278603	0000450523	M	1333	CATAACTGGAGGAGTGAGTTGTATGCCCAGTCTCTGAACGGTTACGGGCC				19q13.12b	PREDICTED: Homo sapiens misc_RNA (LOC644189), miscRNA.					
Homo sapiens	RefSeq	NM_001136118.1	ILMN_371747	LOC399940	NM_001136118.1	NM_001136118.1		399940	209870114	NM_001136118.1	LOC399940	NP_001129590.1	ILMN_3233838	0003390601	I	1492	GGGAACCTGTTTATCCCAGAAAGCCCTCTTTTTCGCACCTCATCAAATGG				11q14.3b	Homo sapiens tripartite motif-containing-like (LOC399940), mRNA.					
Homo sapiens	RefSeq	NM_001017979.1	ILMN_13007	RAB28	NM_001017979.1	NM_001017979.1		9364	63029938	NM_001017979.1	RAB28	NP_001017979.1	ILMN_2293992	0001990767	I	879	GCTGCCCTTCACCTCTGGGTGGGCCCGAGGACTTCTAGGAACTTGTTTTA	4	-	12979199-12979248	4p15.33c	Homo sapiens RAB28, member RAS oncogene family (RAB28), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8647132] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC41862	MGC41862
Homo sapiens	RefSeq	NM_014225.3	ILMN_785	PPP2R1A	NM_014225.3	NM_014225.3		5518	32455242	NM_014225.3	PPP2R1A	NP_055040.2	ILMN_1810467	0005570767	S	2158	TCCCGGGTCACTGGATCCTGCTGCTGTAATGGGAACCCCTCCCCCATTTA	19	+	57421318-57421367	19q13.33e	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit A , alpha isoform (PPP2R1A), mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 11007961] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 11007961] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11007961] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11007961] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11007961] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [pmid 11007961] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11007961] [evidence NAS]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA replication [goid 6275] [pmid 11007961] [evidence NAS]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9989501] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 11007961] [evidence TAS]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [pmid 11007961] [evidence NAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11007961] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 11007961] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [pmid 11007961] [evidence NAS]; A series of molecular signals in which an ion or small molecule is formed or released into the cytosol, thereby helping relay the signal within the cell [goid 19932] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [pmid 11007961] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [pmid 11360189] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42518] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 11360189] [evidence NAS]	Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 9847399] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 11007961] [evidence TAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9847399] [evidence IPI]	PR65A; MGC786	PR65A; MGC786
Homo sapiens	RefSeq	NM_032357.2	ILMN_599	CCDC115	NM_032357.2	NM_032357.2		84317	21362049	NM_032357.2	CCDC115	NP_115733.2	ILMN_1730347	0005910095	S	1202	TGACTTGAGTCCACAAGGACACAAACACCTGAGTAGCTGGGCAGCCCTTG	2	-	131096208-131096257	2q21.1b	Homo sapiens coiled-coil domain containing 115 (CCDC115), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]			ccp1; MGC12981; FLJ30131	ccp1; MGC12981; FLJ30131
Homo sapiens	RefSeq	NM_139137.2	ILMN_4574	KCNC2	NM_139136.2	NM_139136.2		3747	24497456	NM_139136.2	KCNC2	NP_631874.1	ILMN_1657440	0002070022	A	1625	CTCACCCGCCATTTTGTAGGTCTGAGGGTGCTTGGACATACTCTTCGAGC	12	-	75444654-75444703	12q21.1c	Homo sapiens potassium voltage-gated channel, Shaw-related subfamily, member 2 (KCNC2), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC138196; KV3.2	MGC138196; KV3.2
Homo sapiens	RefSeq	NM_058186.3	ILMN_23382	FAM3B	NM_058186.3	NM_058186.3		54097	46255029	NM_058186.3	FAM3B	NP_478066.3	ILMN_1685767	0001450164	A	1104	CAAGCTGGAAAGAGGGTTGGGAGAAACAGCTTGTCCAGGTGGAGCTATGT	21	+	41651244-41651293	21q22.3a	Homo sapiens family with sequence similarity 3, member B (FAM3B), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12160727] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [pmid 12160727] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 12160727] [evidence NAS]	PANDER; 2-21; PRED44; C21orf76; C21orf11; ORF9	2-21; C21orf76; C21orf11; ORF9; PANDER; PRED44
Homo sapiens	RefSeq	XM_928819.1	ILMN_39069	LOC645835	XM_928819.1	XM_928819.1		645835	89058899	XM_928819.1	LOC645835	XP_933912.1	ILMN_1705999	0001580497	S	154	GGGGCTGCTGAGTGGCCCAACTACAGGGGAAAACCATCTCCCTTCTGGAT	22	-	21698966-21699015		PREDICTED: Homo sapiens hypothetical protein LOC645835 (LOC645835), mRNA.					
Homo sapiens	RefSeq	NM_001675.2	ILMN_10757	ATF4	NM_001675.2	NM_001675.2		468	33469975	NM_001675.2	ATF4	NP_001666.2	ILMN_1783394	0006480053	I	593	GCCGGTGGAAGAATCCCCTGGTCTCCGTGAGCGTCCATTTTGTGGAACCT	22	+	38247107-38247156	22q13.1d	Homo sapiens activating transcription factor 4 (tax-responsive enhancer element B67) (ATF4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence ISS]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 12689582] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 15314157] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 15788408] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12689582] [evidence TAS]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence ISS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9190894] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 11960987] [evidence IMP]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	TXREB; TAXREB67; CREB2; CREB-2	TXREB; TAXREB67; CREB2; CREB-2
Homo sapiens	RefSeq	NM_002696.1	ILMN_13646	POLR2G	NM_002696.1	NM_002696.1		5436	4505946	NM_002696.1	POLR2G	NP_002687.1	ILMN_1748438	0007100066	S	514	GATTCAGCAGGACGATGAGATCCGCTTAAAGATTGTGGGGACCCGTGTGG	11	+	62289709-62289758	11q12.3b	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide G (POLR2G), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9409616] [evidence EXP]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	hsRPB7; hRPB19; MGC138369; RPB7; MGC138367	hsRPB7; hRPB19; MGC138369; RPB7; MGC138367
Homo sapiens	RefSeq	NM_138617.2	ILMN_26930	RHCE	NM_138617.2	NM_138617.2		6006	66346667	NM_138617.2	RHCE	NP_619523.2	ILMN_2408663	0003850373	A	507	GTGATGGTGCTGGTGGAGGTGACAGCTTTAGGCACCCTGAGGATGGTCAT	1	-	25729102-25729151	1p36.11c	Homo sapiens Rh blood group, CcEe antigens (RHCE), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1438298] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RHC; RHPI; Rh4; RHIXB; RhVI; RH30A; CD240CE; RH; MGC103977; RHE; RhIVb(J); RhVIII	RHC; RHPI; Rh4; RHIXB; RhVI; RH30A; CD240CE; RH; MGC103977; RHE; RhIVb(J); RhVIII
Homo sapiens	RefSeq	XM_001721342.1	ILMN_337811	LOC100131643	XM_001721342.1	XM_001721342.1		100131643	169206889	XM_001721342.1	LOC100131643	XP_001721394.1	ILMN_3202576	0002940315	A	1236	AAAGGTGAGAAGGAATGGAGTAGGGGAGGGAACCAATGGTGGGAGAGGCG	14	+	31615611-31615660	14q12e	PREDICTED: Homo sapiens hypothetical protein LOC100131643 (LOC100131643), mRNA.					
Homo sapiens	RefSeq	NM_032882.2	ILMN_21456	PNMA6A	NM_032882.2	NM_032882.2		84968	31543155	NM_032882.2	PNMA6A	NP_116271.1	ILMN_1759613	0005090435	S	1892	GATGGCGGAAAGAAGGCACCAGGGCACAGTGGACACTCATCCCGTGACAG	X	+	151993740-151993789	Xq28f	Homo sapiens paraneoplastic antigen like 6A (PNMA6A), mRNA.				MGC15827	MGC15827
Homo sapiens	RefSeq	XR_038211.1	ILMN_338320	LOC100130383	XR_038211.1	XR_038211.1		100130383	169161120	XR_038211.1	LOC100130383		ILMN_3180343	0001940386	A	58	CTTACTCGAAAAACTAAAGAGGCACCATTCGTACCTGTTGGAGCAGCAGG	1	+	111724493-111724542	1p13.2d	PREDICTED: Homo sapiens misc_RNA (LOC100130383), miscRNA.					
Homo sapiens	RefSeq	NM_006096.2	ILMN_24220	NDRG1	NM_006096.2	NM_006096.2		10397	37655182	NM_006096.2	NDRG1	NP_006087.2	ILMN_1809931	0001230070	S	2882	CTTCCCTGGCCTTGAGTAGAAAAGTCGGGGATCGGGGCAAGAGAGGCTGA	8	-	134318696-134318745	8q24.22c	Homo sapiens N-myc downstream regulated gene 1 (NDRG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus [goid 10038] [pmid 9605764] [evidence TAS]; The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors [goid 45576] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]	CMT4D; GC4; RTP; RIT42; PROXY1; NMSL; NDR1; TDD5; TARG1; CAP43; HMSNL; DRG1	CMT4D; GC4; RTP; RIT42; PROXY1; NMSL; NDR1; TDD5; TARG1; CAP43; HMSNL; DRG1
Homo sapiens	RefSeq	NM_001667.1	ILMN_20438	ARL2	NM_001667.2	NM_001667.2		402	148612884	NM_001667.2	ARL2	NP_001658.2	ILMN_1787879	0003290739	S	926	GCTGTGGGCCTCATCCTTCACTCAGTTGTGAAATAAACCGCTCCTTGCCC	11	+	64546180-64546229	11q13.1c	Homo sapiens ADP-ribosylation factor-like 2 (ARL2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The aggregation and bonding together of alpha- and beta-tubulin to form a tubulin heterodimer [goid 7021] [pmid 10831612] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [pmid 10831612] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	ARFL2	ARFL2
Homo sapiens	RefSeq	NM_173828.3	ILMN_14301	RELL2	NM_173828.3	NM_173828.3		285613	40255189	NM_173828.3	RELL2	NP_776189.2	ILMN_1652540	0000060703	S	2100	ACCACAGGGAGCAGGGAGTATGTGAGTCTCCTTCATTGTGCTGATGGACT	5	+	141000185-141000195:141000196-141000196:141000422-141000459	5q31.3c	Homo sapiens RELT-like 2 (RELL2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RELL2; FLJ90583; C5orf16	RELL2; FLJ90583; C5orf16
Homo sapiens	RefSeq	NR_002210.1	ILMN_17031	COX6BP1	NR_002210.1	NR_002210.1		140603	57528087	NR_002210.1	COX6BP1		ILMN_1731838	0005960553	S	148	GTGAGGGCAGCACCTGCATCTTTGAAGAGCCCTGTAATTGCTCTTCTCTG	7	+	148381798-148381847	7q36.1a	Homo sapiens cytochrome c oxidase subunit VIb pseudogene 1 (HCOX52) (COX6BP1) on chromosome 7.				COX6BP-1	COX6BP-1
Homo sapiens	RefSeq	NR_029909.1	ILMN_387797	MIR384	NR_029909.1	NR_029909.1		494333	262205170	NR_029909.1	MIR384		ILMN_3311050	0001240220	S	38	GTATAATGTTCATAAGTCATTCCTAGAAATTGTTCATAATGCCTGTAACA				Xq21.1a	Homo sapiens microRNA 384 (MIR384), microRNA.					
Homo sapiens	RefSeq	NM_152587.2	ILMN_8077	MGC33948	NM_152587.2	NM_152587.2		160140	40255122	NM_152587.2	MGC33948	NP_689800.2	ILMN_1788968	0000610050	S	2091	GCTCTAACATTCCAAGAAACTCAAGGGGGCTGAAGGCATTTCTAAACCAG	11	-	107730982-107731031	11q22.3c	Homo sapiens hypothetical protein MGC33948 (MGC33948), mRNA.					
Homo sapiens	RefSeq	XM_930068.1	ILMN_43027	LOC653809	XM_930068.2	XM_930068.2		653809	113420607	XM_930068.2	LOC653809	XP_935161.1	ILMN_1660168	0003940450	S	1554	CAACTGTATGTACACATTTGTCAAAATTCTAATTGTATTATACACAACAT	9	+	39367836-39367885	9p13.1a	PREDICTED: Homo sapiens hypothetical LOC653809 (LOC653809), mRNA.					
Homo sapiens	RefSeq	NM_002718.3	ILMN_168988	PPP2R3A	NM_002718.3	NM_002718.3		5523	32967594	NM_002718.3	PPP2R3A	NP_002709.2	ILMN_1702708	0006130411	I	1511	AGCTTACAACTGACTCCCTTCTCCCCAGTGTTTGGCACTGAACAACCCCC	3	+	135721286-135721335	3q22.2b	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha (PPP2R3A), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 1849734] [evidence ISS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1849734] [evidence ISS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence ISS]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 8392071] [evidence TAS]	PR72; PPP2R3; PR130	PR72; PPP2R3; PR130
Homo sapiens	RefSeq	NM_002718.3	ILMN_168988	PPP2R3A	NM_002718.3	NM_002718.3		5523	32967594	NM_002718.3	PPP2R3A	NP_002709.2	ILMN_2376520	0006560152	A	6126	GAATCGCTTGAGCCCCAGGCTTCGAGGCTGCAGTGAGCTATGATTACGAC	3	+	135866116-135866165	3q22.2b	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha (PPP2R3A), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 1849734] [evidence ISS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1849734] [evidence ISS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence ISS]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 8392071] [evidence TAS]	PR72; PPP2R3; PR130	PR72; PPP2R3; PR130
Homo sapiens	RefSeq	NM_001011543.1	ILMN_179733	MAGEA10	NM_001011543.1	NM_001011543.1		4109	58530862	NM_001011543.1	MAGEA10	NP_001011543.1	ILMN_1708901	0006760180	I	212	TAAGGCAGTGTTTTCAGGTCACAGAGCAGAAAGGGCCCAGACAGTGCCAG	X	-	151304469-151304518	Xq28e	Homo sapiens melanoma antigen family A, 10 (MAGEA10), transcript variant 1, mRNA.				MAGE10; MGC10599	MAGE10; MGC10599
Homo sapiens	RefSeq	NM_020742.2	ILMN_169359	NLGN4X	NM_020742.2	NM_020742.2		57502	31317257	NM_020742.2	NLGN4X	NP_065793.1	ILMN_2341067	0007560139	A	5515	GGCTTTTACTCTTGATCTTCAAAGGCACGCAGGGTTTAATGGTTCCTTGG	X	-	5820273-5820322	Xp22.32a-p22.31f	Homo sapiens neuroligin 4, X-linked (NLGN4X), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11368788] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 15150161] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 17292328] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [pmid 12669065] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells [goid 45216] [pmid 11368788] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [pmid 15150161] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [pmid 11368788] [evidence NAS]	Interacting selectively with chloride ions (Cl-) [goid 31404] [pmid 18093521] [evidence IDA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [pmid 18093521] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 18093521] [evidence IDA]	NLGN; HNLX; HLNX; AUTSX2; NLGN4; ASPGX2; KIAA1260; MGC22376	NLGN; HNLX; HLNX; AUTSX2; NLGN4; ASPGX2; KIAA1260; MGC22376
Homo sapiens	RefSeq	NR_024397.1	ILMN_371500	LOC728190	NR_024397.1	NR_024397.1		728190	212275915	NR_024397.1	LOC728190		ILMN_3245897	0002940148	S	555	CCTCGAAATTCTGGGCCGAAATGATCCGCCTGCCTCAGCCTCCAAAGTAG	10	-	89005883-89005932	10q23.2b	Homo sapiens hypothetical LOC728190 (LOC728190), non-coding RNA.					
Homo sapiens	RefSeq	NM_001080543.1	ILMN_170922	C19ORF29	NM_001080543.1	NM_001080543.1		58509	122937391	NM_001080543.1	C19orf29	NP_001074012.1	ILMN_2350421	0001820307	A	3359	CCGACGGGAACATCTCCAACAGAAGCAAAACGGAAAGTGCCTCCCGGACC	19	-	3610842-3610891	19p13.3e	Homo sapiens chromosome 19 open reading frame 29 (C19orf29), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15302935] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	cactin; NY-REN-24	cactin; NY-REN-24
Homo sapiens	RefSeq	NM_001080543.1	ILMN_170922	C19ORF29	NM_001080543.1	NM_001080543.1		58509	122937391	NM_001080543.1	C19orf29	NP_001074012.1	ILMN_2262462	0000070243	I	3228	CCCCGAGTTTTGCCCATATCAGGACAGTGGCTCCTTCTCACTCCCCTTTC	19	-	3610973-3611022	19p13.3e	Homo sapiens chromosome 19 open reading frame 29 (C19orf29), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15302935] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	cactin; NY-REN-24	cactin; NY-REN-24
Homo sapiens	RefSeq	XR_037892.1	ILMN_347704	LOC100130550	XR_037892.1	XR_037892.1		100130550	169165749	XR_037892.1	LOC100130550		ILMN_3191201	0003140133	A	1841	AGAGTCTAAGCACCCTTTGAAAGTTTTAAGTAGGGTCTGAAAACCTGGTG				3q22.1c	PREDICTED: Homo sapiens misc_RNA (LOC100130550), miscRNA.					
Homo sapiens	RefSeq	XR_037892.1	ILMN_347704	LOC100130550	XR_037892.1	XR_037892.1		100130550	169165749	XR_037892.1	LOC100130550		ILMN_3267670	0004060224	M	2094	GCGACTGGTTGCAGTTCCATTCCTCCAGCTGGATTTAAACCCACTCCTTC				3q22.1c	PREDICTED: Homo sapiens misc_RNA (LOC100130550), miscRNA.					
Homo sapiens	Unigene	Hs.144884	ILMN_78127	HS.144884	Hs.144884		Hs.144884		51463858	XM_295091			ILMN_1882262	0001450035	S	241	GCGCAAAGGAGAGGCCGTGGACATGAAAGGAAGGAGCCACTGGGTACATG					PREDICTED: Homo sapiens hypothetical LOC339875 (LOC339875), mRNA					
Homo sapiens	RefSeq	NM_033319.1	ILMN_21203	CENPL	NM_033319.1	NM_033319.1		91687	58743362	NM_033319.1	CENPL	NP_201576.1	ILMN_1742779	0004060468	S	1432	TCCCCACCATGCCTTTGGAGTTGCCAAGATGGAAGCCAAGAAGGATCTAG	1	-	172036047-172036096	1q25.1a	Homo sapiens centromere protein L (CENPL), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]			C1orf155; RP3-383J4.1; FLJ31786; dJ383J4.3; CENP-L; FLJ31044	C1orf155; RP3-383J4.1; FLJ31786; dJ383J4.3; CENP-L; FLJ31044
Homo sapiens	RefSeq	NM_025113.1	ILMN_19053	C13ORF18	NM_025113.1	NM_025113.1		80183	13376686	NM_025113.1	C13orf18	NP_079389.1	ILMN_2196550	0005260333	S	2010	CCGGTGTGCGAGGATCACAGCGAGGAGAAAACTTCTGGAAAGTGTGGCCT	13	-	45815534-45815583	13q14.12b	Homo sapiens chromosome 13 open reading frame 18 (C13orf18), mRNA.				FLJ43762; FLJ21562	FLJ43762; FLJ21562
Homo sapiens	RefSeq	NM_025113.1	ILMN_19053	C13ORF18	NM_025113.1	NM_025113.1		80183	13376686	NM_025113.1	C13orf18	NP_079389.1	ILMN_1773388	0002850286	S	1926	CCCATTTCAGACAGCAACATGTAGAAGATGTTCAGCGTGCAGGGCTTGCT	13	-	45815618-45815633:45816877-45816910	13q14.12b	Homo sapiens chromosome 13 open reading frame 18 (C13orf18), mRNA.				FLJ43762; FLJ21562	FLJ43762; FLJ21562
Homo sapiens	RefSeq	XM_001721287.1	ILMN_352048	LOC728953	XM_001721287.1	XM_001721287.1		728953	169207186	XM_001721287.1	LOC728953	XP_001721339.1	ILMN_3229652	0007560707	A	331	GGGCTAAAAATGGTGGAAAAGGACCAAGATGGGGGCCGCAAACTGACACG				14q13.2a	PREDICTED: Homo sapiens similar to S19 ribosomal protein (LOC728953), mRNA.					
Homo sapiens	RefSeq	XM_001721287.1	ILMN_352048	LOC728953	XM_001721287.1	XM_001721287.1		728953	169207186	XM_001721287.1	LOC728953	XP_001721339.1	ILMN_3234384	0006940259	I	540	AGGCTGAAATAGGGGGATCACTTTGAGGCCAGGAGTTTGAGACCTGCCTG				14q13.2a	PREDICTED: Homo sapiens similar to S19 ribosomal protein (LOC728953), mRNA.					
Homo sapiens	RefSeq	NM_178860.3	ILMN_309097	SEZ6	NM_001098635.1	NM_001098635.1		124925	148839345	NM_001098635.1	SEZ6	NP_001092105.1	ILMN_1658809	0006940553	S	4024	TCCAAGGACCCAGGAATTTGGCATGGAACAGGTGGTAGGAGAGCCCCAGG	17	-	27282069-27282118	17q11.2a-q11.2b	Homo sapiens seizure related 6 homolog (mouse) (SEZ6), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_180703.1	ILMN_13584	U1SNRNPBP	NM_180703.1	NM_180703.1		11066	31077199	NM_180703.1	U1SNRNPBP	NP_851034.1	ILMN_2395285	0002510692	A	895	GCTTCGGCTGGTCAGGGACTTGGTCACAGGTTTTTCAAAGGGCTACGCCT	12	+	122516276-122516325	12q24.31d	Homo sapiens U11/U12 snRNP 35K (U1SNRNPBP), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC138160; HM-1	MGC138160; HM-1
Homo sapiens	RefSeq	NR_024618.1	ILMN_370045	LOC100129550	NR_024618.1	NR_024618.1		100129550	218931218	NR_024618.1	LOC100129550		ILMN_3236239	0007000328	S	5735	CAGGGCTTCTCGTCATCACTTGCAGCGTGTGAGCTTCCAAATAAGCCGCC	3	+	122611094-122611143	3q21.1b	Homo sapiens hypothetical LOC100129550 (LOC100129550), non-coding RNA.					
Homo sapiens	RefSeq	NM_032270.2	ILMN_1023	LRRC8C	NM_032270.2	NM_032270.2		84230	19923728	NM_032270.2	LRRC8C	NP_115646.2	ILMN_2094396	0000050201	S	2072	CCTACATCCCAGAGCATATAAAGAAACTCACCAGCCTGGAACGCCTGTCC	1	+	89952665-89952714	1p22.2c	Homo sapiens leucine rich repeat containing 8 family, member C (LRRC8C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AD158; FAD158; DKFZp586J1119; MGC138551	AD158; FAD158; DKFZp586J1119; MGC138551
Homo sapiens	Unigene	Hs.156470	ILMN_79314	HS.156470	Hs.156470		Hs.156470		4078313	AI341386			ILMN_1899461	0002480427	S	143	CTGATAGAGACAGAGATGAAGCTGGAAGGAAGACTAGTGAAAATTGAGCC	1	+	59292543-59292592		qx91b01.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2009833 3, mRNA sequence					
Homo sapiens	RefSeq	XM_936365.1	ILMN_37623	LOC647471	XM_942788.2	XM_942788.2		647471	113431105	XM_942788.2	LOC647471	XP_947881.1	ILMN_1793215	0007400543	A	1015	GTCAAGAACTCGATGAAATACTACGATGACTGTGCCAAGATTCTGGGGTA					PREDICTED: Homo sapiens similar to lethal (1) G0196 CG14616-PD, isoform D, transcript variant 2 (LOC647471), mRNA.					
Homo sapiens	RefSeq	NM_013284.1	ILMN_5705	POLM	NM_013284.1	NM_013284.1		27434	7019492	NM_013284.1	POLM	NP_037416.1	ILMN_1716973	0007570553	S	2288	GAGCTGCTTGACTCACCGGCTTCCTATTTGATGCACCCAGGCCCCCTTGT	7	-	44078607-44078656	7p13d	Homo sapiens polymerase (DNA directed), mu (POLM), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins [goid 16446] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 3912] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 3912] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 3912] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 3912] [evidence IEA]	Tdt-N	Tdt-N
Homo sapiens	Unigene	Hs.554274	ILMN_111868	HS.554274	Hs.554274		Hs.554274		24658339	BC039423			ILMN_1833563	0005690154	S	854	TGGAGCAATCAGCTCAGGACTGTTAGGTGGGAGCAGCAATCATCCAGCTC	4	-	3645229-3645278		Homo sapiens cDNA clone IMAGE:5302720					
Homo sapiens	RefSeq	NM_001030287.1	ILMN_6468	ATF3	NM_001030287.2	NM_001030287.2		467	95102484	NM_001030287.2	ATF3	NP_001025458.1	ILMN_1661109	0006380735	I	74	CTCTATATAGGATGCTCTGCTGTTTCCTAAGGATTTTCAGCACCTTGCCC	1	+	210805393-210805442	1q32.3c	Homo sapiens activating transcription factor 3 (ATF3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7515060] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 7515060] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18255255] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]		
Homo sapiens	RefSeq	NM_000814.3	ILMN_19294	GABRB3	NM_000814.4	NM_000814.4		2562	83779011	NM_000814.4	GABRB3	NP_000805.1	ILMN_1660608	0004250349	I	160	AGGAAGGCTTTTCGGCATCTTCTCGGCCCCGGTGCTGGTGGCTGTGGTGT	15	-	27018042-27018091	15q12b	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 3 (GABRB3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1664410] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1664410] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [pmid 1664410] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC9051	MGC9051
Homo sapiens	RefSeq	NM_000814.3	ILMN_19294	GABRB3	NM_000814.4	NM_000814.4		2562	83779011	NM_000814.4	GABRB3	NP_000805.1	ILMN_1709681	0005390669	A	2849	GTCACCCAACGACCCATGACCGTTCTCTGAGGCAAAGGAGGGCAACCTGA	15	-	26791605-26791654	15q12b	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 3 (GABRB3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1664410] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1664410] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [pmid 1664410] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC9051	MGC9051
Homo sapiens	RefSeq	XM_937254.1	ILMN_19294	GABRB3	NM_000814.4	NM_000814.4		2562	83779011	NM_000814.4	GABRB3	NP_000805.1	ILMN_1767503	0005090431	I	5449	CCCAACACCTGGGTAAACAATGACCTTCCAGAGAGTGGCTCCCGTATGCC	15	-	26789005-26789054	15q12b	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 3 (GABRB3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1664410] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1664410] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [pmid 1664410] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC9051	
Homo sapiens	RefSeq	XM_937254.1	ILMN_19294	GABRB3	NM_000814.4	NM_000814.4		2562	83779011	NM_000814.4	GABRB3	NP_000805.1	ILMN_1687090	0001710528	A	2339	GGAGTGGATCCAGCTTCACTGTCATGTGCGAACACAGTGACACGTTTGGC	15	-	26792115-26792164	15q12b	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 3 (GABRB3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1664410] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1664410] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [pmid 1664410] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC9051	
Homo sapiens	RefSeq	NM_001004752.1	ILMN_164108	OR51F1	NM_001004752.1	NM_001004752.1		256892	52353946	NM_001004752.1	OR51F1	NP_001004752.1	ILMN_1808825	0006100044	S	335	TGGAATCTGGAGTGCTGGTGGCTACAGCCTTTGACCGTTATGTGGCCATC	11	-	4790763-4790812	11p15.4d	Homo sapiens olfactory receptor, family 51, subfamily F, member 1 (OR51F1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-21; OR51F1P	OR11-21; OR51F1P
Homo sapiens	RefSeq	NM_001004752.1	ILMN_164108	OR51F1	NM_001004752.1	NM_001004752.1		256892	52353946	NM_001004752.1	OR51F1	NP_001004752.1	ILMN_2193545	0005890750	S	839	ATGTATACCTGCTTTTACCCCCTGTGCTCAACCCCATCATCGACAGTGTA	11	-	4790259-4790308	11p15.4d	Homo sapiens olfactory receptor, family 51, subfamily F, member 1 (OR51F1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-21; OR51F1P	OR11-21; OR51F1P
Homo sapiens	RefSeq	NM_014374.1	ILMN_1054	REPIN1	NM_014374.3	NM_014374.3		29803	153792538	NM_014374.3	REPIN1	NP_055189.2	ILMN_1731023	0001570082	I	8	ACAGGGGCAGAGTGAGTTGGTCTCTGGAGTGACTGTGCTTTTCCACCCTC	7	+	149699198-149699247	7q36.1c	Homo sapiens replication initiator 1 (REPIN1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [pmid 10606657] [evidence TAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 10606657] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10606657] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp464; RIP60; ZNF464; AP4	Zfp464; RIP60; ZNF464; AP4
Homo sapiens	RefSeq	NM_001017920.1	ILMN_17040	DAPL1	NM_001017920.1	NM_001017920.1		92196	62988347	NM_001017920.1	DAPL1	NP_001017920.1	ILMN_1687556	0006770370	S	385	CAGCCGTCTGGCCAGCTGCCTCGAATATCTGACAGCTTAGCAAAAAGGGC	2	+	159380596-159380645	2q24.1e	Homo sapiens death associated protein-like 1 (DAPL1), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]			
Homo sapiens	RefSeq	NM_003186.3	ILMN_2335	TAGLN	NM_003186.3	NM_003186.3		6876	48255904	NM_003186.3	TAGLN	NP_003177.2	ILMN_1778668	0000650678	A	1022	GATGTGGGCCAAGTCCACTGTCCTCCTTGGCGGCAAAAGCCCATTGAAGA	11	+	116580580-116580629	11q23.3b	Homo sapiens transgelin (TAGLN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9615232] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TAGLN1; WS3-10; SM22; DKFZp686P11128; SMCC	TAGLN1; WS3-10; SM22; DKFZp686P11128; SMCC
Homo sapiens	RefSeq	NM_003186.3	ILMN_2335	TAGLN	NM_003186.3	NM_003186.3		6876	48255904	NM_003186.3	TAGLN	NP_003177.2	ILMN_2400935	0002360326	A	398	CAGGTGGCTCAGTTCCTGAAGGCGGCTGAGGACTATGGGGTCATCAAGAC	11	+	116579329-116579378	11q23.3b	Homo sapiens transgelin (TAGLN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9615232] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TAGLN1; WS3-10; SM22; DKFZp686P11128; SMCC	TAGLN1; WS3-10; SM22; DKFZp686P11128; SMCC
Homo sapiens	RefSeq	XR_039650.1	ILMN_336257	LOC729340	XR_039650.1	XR_039650.1		729340	169201334	XR_039650.1	LOC729340		ILMN_3298215	0005550113	M	385	GAGCACATCCAAGTGAACAAAACACCTAAGATGCGCCGCCGGACCCACAG				10q26.11c	PREDICTED: Homo sapiens misc_RNA (LOC729340), miscRNA.					
Homo sapiens	RefSeq	XM_936054.1	ILMN_37145	LOC642011	XM_936054.1	XM_936054.1		642011	88986935	XM_936054.1	LOC642011	XP_941147.1	ILMN_1804970	0007550619	S	252	TAAGGGAGGTCTTTTGCCCCCATCTGGTAGCCCTGGCTTCAGCAGGAGCC					PREDICTED: Homo sapiens similar to Beta-glucuronidase precursor (LOC642011), mRNA.					
Homo sapiens	Unigene	Hs.554603	ILMN_112053	HS.554603	Hs.554603		Hs.554603		23299483	BU632228			ILMN_1816063	0004570431	S	481	CACAGCTGAGGGACTATGGAAAGCCGTCCACCTGAGTTCTGTACCTTGGG	16	+	13361341-13361390		UI-H-FE1-beb-a-11-0-UI.s1 NCI_CGAP_FE1 Homo sapiens cDNA clone UI-H-FE1-beb-a-11-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_291757.4	ILMN_42114	LOC653567	XM_291757.4	XM_291757.4		653567	89030814	XM_291757.4	LOC653567	XP_291757.4	ILMN_1684180	0001500739	S	408	ATTTGTGTTGGCCAGGGGGCTCTTACCTCTAGCCCAGGCTCCTCTCTGGT	10	+	17831996-17832045	10p12.33c	PREDICTED: Homo sapiens similar to similar to protein of unknown function (LOC653567), mRNA.					
Homo sapiens	RefSeq	NM_016396.2	ILMN_6119	CTDSPL2	NM_016396.2	NM_016396.2		51496	100815974	NM_016396.2	CTDSPL2	NP_057480.2	ILMN_2077758	0001440674	S	2919	GGCACAGTACACTCCCAAGCCACCAATGCAGTTAATATGCTCTCATAGTG	15	+	42604766-42604815	15q15.3c	Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 (CTDSPL2), mRNA.			Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ10523; HSPC129; HSPC058	HSPC129; FLJ10523; HSPC058
Homo sapiens	RefSeq	XR_038370.1	ILMN_335197	LOC100127884	XR_038370.1	XR_038370.1		100127884	169172315	XR_038370.1	LOC100127884		ILMN_3176875	0005390048	A	557	CGCCTGGGCCGCTGGACCGCGTCTCCCTGGATGTGACCAGGGATAAGGGT				7q11.21b	PREDICTED: Homo sapiens misc_RNA (LOC100127884), miscRNA.					
Homo sapiens	RefSeq	NM_002556.2	ILMN_19982	OSBP	NM_002556.2	NM_002556.2		5007	34485728	NM_002556.2	OSBP	NP_002547.1	ILMN_1706376	0005550296	S	4881	CCCCTTCTCTTCCTTCACCATCTGCACTACATTTCTGGCTGATCCCAATC	11	-	59342023-59342072	11q12.1d	Homo sapiens oxysterol binding protein (OSBP), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Interacting selectively with oxysterol, an oxidized form of cholesterol [goid 8142] [pmid 1970801] [evidence TAS]	OSBP1	OSBP1
Homo sapiens	Unigene	Hs.261314	ILMN_83790	HS.261314	Hs.261314		Hs.261314		1670034	AA114939			ILMN_1890008	0005390241	S	435	GCCATGACACCACAGCCTTCACACAGGAATTTACATGCACTACTGAACGC	8	+	135848296-135848345		zk88a02.r1 Soares_pregnant_uterus_NbHPU Homo sapiens cDNA clone IMAGE:489866 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001136.3	ILMN_11545	AGER	NM_001136.3	NM_001136.3		177	26787960	NM_001136.3	AGER	NP_001127.1	ILMN_1729777	0001940465	A	1076	TGGGGACAGCCGCCCTGCTCATTGGGGTCATCTTGTGGCAAAGGCGGCAA	6	-	32257122-32257171	6p21.32b	Homo sapiens advanced glycosylation end product-specific receptor (AGER), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1378843] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1378843] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10399917] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10835680] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 1378843] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16061848] [evidence IPI]	MGC22357; RAGE	MGC22357; RAGE
Homo sapiens	RefSeq	NM_001136.3	ILMN_11545	AGER	NM_001136.3	NM_001136.3		177	26787960	NM_001136.3	AGER	NP_001127.1	ILMN_2257015	0007200369	I	938	ATTCCAGCCACGGGCCCCAGGAAAGCCGTGCTGTCAGCATCAGCATCATC	6	-	32258002-32258051	6p21.32b	Homo sapiens advanced glycosylation end product-specific receptor (AGER), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1378843] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1378843] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10399917] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10835680] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 1378843] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16061848] [evidence IPI]	MGC22357; RAGE	MGC22357; RAGE
Homo sapiens	RefSeq	NM_001136.3	ILMN_11545	AGER	NM_001136.3	NM_001136.3		177	26787960	NM_001136.3	AGER	NP_001127.1	ILMN_1690829	0006620523	I	876	TGTGCTGATCCTCCCTGAGATAGGGCCTCAGGACCAGGGAACCTACAGCT	6	-	32258064-32258113	6p21.32b	Homo sapiens advanced glycosylation end product-specific receptor (AGER), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1378843] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1378843] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10399917] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10835680] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 1378843] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16061848] [evidence IPI]	MGC22357; RAGE	MGC22357; RAGE
Homo sapiens	RefSeq	NM_175922.3	ILMN_4896	PRR18	NM_175922.3	NM_175922.3		285800	58331143	NM_175922.3	PRR18	NP_787118.2	ILMN_1683316	0005290279	S	2397	GCTTATGCAAGTGACGGTGCTGCTCTTGTTCCACCCCCACCCAGATGGTC	6	-	166719425-166719474	6q27c	Homo sapiens proline rich 18 (PRR18), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			MGC35308	MGC35308
Homo sapiens	RefSeq	NM_001941.2	ILMN_18162	DSC3	NM_001941.2	NM_001941.2		1825	13435367	NM_001941.2	DSC3	NP_001932.1	ILMN_2359159	0003990184	A	5132	CTCAACCAAAAGACAGTCGAGAAGCCAGGGGGAGAAAGAACTCAGGGCAC	18	-	26825711-26825760	18q12.1d	Homo sapiens desmocollin 3 (DSC3), transcript variant Dsc3a, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7929347] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7929347] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 7929347] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7929347] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DSC1; DSC4; CDHF3; DSC; HT-CP; DSC2	CDHF3; DSC; DSC2; DSC1; DSC4; HT-CP
Homo sapiens	RefSeq	NM_032446.1	ILMN_27373	MEGF10	NM_032446.1	NM_032446.1		84466	14192942	NM_032446.1	MEGF10	NP_115822.1	ILMN_1652306	0000840601	S	5971	GGACTCCAAGGGGCCACTGCCATCCCTTCCTGTGTGCTCTTTTTGACAAG	5	+	126823254-126823303	5q23.2f	Homo sapiens multiple EGF-like-domains 10 (MEGF10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ41574; DKFZp781K1852; KIAA1780	FLJ41574; DKFZp781K1852; KIAA1780
Homo sapiens	RefSeq	NM_032446.1	ILMN_27373	MEGF10	NM_032446.1	NM_032446.1		84466	14192942	NM_032446.1	MEGF10	NP_115822.1	ILMN_2146389	0000270201	S	7232	ACTGCCCGTTTAGAGTCCTGTTAATATTGATGTCCTAACACTGGGTCTGC	5	+	126824515-126824564	5q23.2f	Homo sapiens multiple EGF-like-domains 10 (MEGF10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles [goid 6909] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ41574; DKFZp781K1852; KIAA1780	FLJ41574; DKFZp781K1852; KIAA1780
Homo sapiens	RefSeq	NM_138737.1	ILMN_7949	HEPH	NM_138737.1	NM_138737.1		9843	21166384	NM_138737.1	HEPH	NP_620074.1	ILMN_1714523	0001850349	A	4108	CTGCCATGAGCATGTACAACCTCTGGAGCTAGAAGCTCCTCAGGAAAGCC	X	+	65403801-65403850	Xq12a	Homo sapiens hephaestin (HEPH), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0698; CPL	KIAA0698; CPL
Homo sapiens	RefSeq	NM_001010915.1	ILMN_6355	PTPLAD2	NM_001010915.1	NM_001010915.1		401494	58219057	NM_001010915.1	PTPLAD2	NP_001010915.1	ILMN_1690114	0002900328	S	3665	GAGACAGCCTGGGTGACAGAGTGAGACTCTATCTCAAAAGAGAAGACCCT	9	-	20993986-20994035	9p21.3d	Homo sapiens protein tyrosine phosphatase-like A domain containing 2 (PTPLAD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp686F01145; DKFZp686G24132	DKFZp686F01145; DKFZp686G24132
Homo sapiens	RefSeq	NM_001103154.1	ILMN_335719	ARL17B	NM_001103154.1	NM_001103154.1		641522	157041216	NM_001103154.1	ARL17B	NP_001096624.1	ILMN_3231952	0003360286	I	401	CAAGAAATTATGCGGGGTCACTGGCACAAATGATGAGGCATCTCCTGGAA	17	-	44594518-44594567	17q21.31e	Homo sapiens ADP-ribosylation factor-like 17B (ARL17B), transcript variant 2, mRNA.				ARL17B	ARL17B
Homo sapiens	RefSeq	NM_001004684.1	ILMN_22920	OR2D3	NM_001004684.1	NM_001004684.1		120775	52317193	NM_001004684.1	OR2D3	NP_001004684.1	ILMN_1707351	0001690528	S	649	TCAATGGGCGTGGTAATCCTCCTGGCCCCTGTCTCCCTGATTCTTGGTTC	11	+	6899457-6899506	11p15.4b	Homo sapiens olfactory receptor, family 2, subfamily D, member 3 (OR2D3), mRNA.				OR11-89	OR11-89
Homo sapiens	RefSeq	NM_198578.2	ILMN_21291	LRRK2	NM_198578.2	NM_198578.2		120892	83722281	NM_198578.2	LRRK2	NP_940980.2	ILMN_2226015	0001820725	S	5997	TCAGCAGGACAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCAC	12	+	39015155-39015204	12q12c	Homo sapiens leucine-rich repeat kinase 2 (LRRK2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16321986] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16352719] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16321986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external (cytoplasmic face) of the mitochondrial outer membrane [goid 32473] [pmid 16269541] [evidence IDA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 17200152] [evidence IDA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [pmid 16352719] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [pmid 17200152] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 16980962] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 16321986] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 16269541] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 17442267] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 17200152] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 17200152] [evidence IDA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 17442267] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16352719] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 17200152] [evidence IC ]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 16980962] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 17442267] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16321986] [evidence IPI]	RIPK7; ROCO2; PARK8; AURA17	RIPK7; ROCO2; PARK8; AURA17
Homo sapiens	RefSeq	XM_930820.1	ILMN_21291	LRRK2	NM_198578.2	NM_198578.2		120892	83722281	NM_198578.2	LRRK2	NP_940980.2	ILMN_1776649	0003520291	A	7502	CACAGCTAGGAAGCCTTAAAAATGTCATGCTGGTATTGGGCTACAACCGG	12	+	39045111-39045119:39047075-39047115	12q12c	Homo sapiens leucine-rich repeat kinase 2 (LRRK2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16321986] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16352719] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16321986] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The external (cytoplasmic face) of the mitochondrial outer membrane [goid 32473] [pmid 16269541] [evidence IDA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 17200152] [evidence IDA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [pmid 16352719] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43068] [pmid 17200152] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 16980962] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 16321986] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 16269541] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 17442267] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 17200152] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 17200152] [evidence IDA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 17442267] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16352719] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 17200152] [evidence IC ]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 16980962] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 17442267] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16321986] [evidence IPI]	RIPK7; ROCO2; PARK8; AURA17	
Homo sapiens	RefSeq	XM_001720993.1	ILMN_336172	LOC100132955	XM_001720993.1	XM_001720993.1		100132955	169184273	XM_001720993.1	LOC100132955	XP_001721045.1	ILMN_3236570	0000650768	S	2380	ACCCAGAATTACAGAGCCAGTGAGTCACAGAACCTGAACTTGAGCTCAGT	9	+	68771610-68771659	9q12i	PREDICTED: Homo sapiens hypothetical protein LOC100132955 (LOC100132955), mRNA.					
Homo sapiens	RefSeq	NM_006486.2	ILMN_12209	FBLN1	NM_006486.2	NM_006486.2		2192	34734065	NM_006486.2	FBLN1	NP_006477.2	ILMN_1672536	0004830685	I	2858	TCACCAGGGGAATGGCTGGGATTTCTCGGCACTCTGCATCATCCATCTTT	22	+	44375589-44375638	22q13.31c	Homo sapiens fibulin 1 (FBLN1), transcript variant D, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 2269669] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2269669] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 2269669] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 2269669] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FBLN	FBLN
Homo sapiens	RefSeq	NM_002200.3	ILMN_169183	IRF5	NM_002200.3	NM_002200.3		3663	38683857	NM_002200.3	IRF5	NP_002191.1	ILMN_2312606	0002230431	A	2743	TGCCTTCAGCCATTGAGTGGAAGCTGCCCCAGGCCCTTACCAGGTGCAGA	7	+	127973722-127973771	7q32.1a	Homo sapiens interferon regulatory factor 5 (IRF5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Homo sapiens	RefSeq	NM_001013636.1	ILMN_19101	LOC387873	NM_001013636.1	NM_001013636.1		387873	61966728	NM_001013636.1	LOC387873	NP_001013658.1	ILMN_1748891	0006400689	S	615	GTGCCATTGTCTCTCCCTAGACTGTTGGCTTCCTGAGGGCAGGCACTTTG	12	-	87151042-87151055:87151056-87151091		Homo sapiens hypothetical LOC387873 (LOC387873), mRNA.					
Homo sapiens	RefSeq	NM_001102398.1	ILMN_352462	HNRNPR	NM_001102398.1	NM_001102398.1		10236	156151393	NM_001102398.1	HNRNPR	NP_001095868.1	ILMN_3265895	0006650762	M	1844	GTGGATCTCGGGGCAATCGTGGGGGCAATGTAGGAGGCAAGAGAAAGGCA	1	-	23637123-23637172	1p36.12a	Homo sapiens heterogeneous nuclear ribonucleoprotein R (HNRNPR), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9421497] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 9421497] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9421497] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	HNRPR; hnRNP-R; FLJ25714	HNRPR; hnRNP-R; FLJ25714
Homo sapiens	RefSeq	NM_005564.2	ILMN_20794	LCN2	NM_005564.3	NM_005564.3		3934	108936956	NM_005564.3	LCN2	NP_005555.2	ILMN_1692223	0004390398	S	625	CCACATCGTCTTCCCTGTCCCAATCGACCAGTGTATCGACGGCTGAGTGC	9	+	129954359-129954384:129955200-129955219:129955220-129955223	9q34.11b	Homo sapiens lipocalin 2 (LCN2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NGAL	NGAL
Homo sapiens	RefSeq	NM_145811.1	ILMN_11453	CACNG5	NM_145811.1	NM_145811.1		27091	22027550	NM_145811.1	CACNG5	NP_665810.1	ILMN_1748102	0000430068	I	753	CCTGCAGATGAACAGCAACTACCCCGCCTTGCTCAAGTGCCCCGACTATG	17	+	62311744-62311793	17q24.2a	Homo sapiens calcium channel, voltage-dependent, gamma subunit 5 (CACNG5), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 10613843] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC126656; MGC126682	MGC126656; MGC126682
Homo sapiens	RefSeq	XM_001718711.1	ILMN_334119	LOC100129699	XM_001718711.1	XM_001718711.1		100129699	169188952	XM_001718711.1	LOC100129699	XP_001718763.1	ILMN_3252185	0003400561	M	139	GAGAAGCCACACCAGAATGCCAGCCGACATTTGCATGCAGAGACGTTGCC	10	+	122932909-122932958	10q26.12b	PREDICTED: Homo sapiens similar to hCG2023449 (LOC100129699), mRNA.					
Homo sapiens	RefSeq	NM_006454.2	ILMN_26701	MXD4	NM_006454.2	NM_006454.2		10608	10947033	NM_006454.2	MXD4	NP_006445.1	ILMN_1756541	0003710647	S	3701	GGCCACCTGTCCACCGTGTGGGCCGTGCTGTGTCCTTATGTCATTGTAAT	4	-	2249182-2249231	4p16.3b	Homo sapiens MAX dimerization protein 4 (MXD4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8521822] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8521822] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8521822] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8521822] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MSTP149; MAD4; MST149	MSTP149; MAD4; MST149
Homo sapiens	RefSeq	NR_004053.2	ILMN_340564	SOX2OT	NR_004053.2	NR_004053.2		347689	166091438	NR_004053.2	SOX2OT		ILMN_3242257	0006840538	S	1644	CACAGAACCAGCACCCAAATGGTAGAGGAGGTCCTTCCAAGACTTCTAGG	3	+	181458154-181458203		Homo sapiens SOX2 overlapping transcript (non-protein coding) (SOX2OT), non-coding RNA.				DKFZp761J1324	DKFZp761J1324
Homo sapiens	RefSeq	NM_015340.3	ILMN_11446	LARS2	NM_015340.3	NM_015340.3		23395	41352689	NM_015340.3	LARS2	NP_056155.1	ILMN_1700168	0004280767	S	3908	CCACAGCGGTCTGGCTGTTGGGAAGATGGCCAGGAATGGACTCATACCAT	3	+	45533263-45533292:45534399-45534418	3p21.31j	Homo sapiens leucyl-tRNA synthetase 2, mitochondrial (LARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of coupling leucine to leucyl-tRNA, catalyzed by leucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6429] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-tRNA(Leu) [goid 4823] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC26121; LEURS; KIAA0028	MGC26121; LEURS; KIAA0028
Homo sapiens	RefSeq	XM_931341.1	ILMN_33742	LOC643125	XM_931341.1	XM_931341.1		643125	89047223	XM_931341.1	LOC643125	XP_936434.1	ILMN_1652254	0002640646	S	61	ACTCCTGGAAGAAGGTGCTTCATCTCTGCAGTGCTTGGAACCCTGGCTGA	18	-	57566929-57566978		PREDICTED: Homo sapiens hypothetical protein LOC643125 (LOC643125), mRNA.					
Homo sapiens	RefSeq	NM_007308.1	ILMN_2235	SNCA	NM_007308.1	NM_007308.1		6622	6806897	NM_007308.1	SNCA	NP_009292.1	ILMN_1701933	0005360273	A	494	AGTATCTGTACCTGCCCCCACTCAGCATTTCGGTGCTTCCCTTTCACTGA	4	-	90866610-90866659	4q22.1d	Homo sapiens synuclein, alpha (non A4 component of amyloid precursor) (SNCA), transcript variant NACP112, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8248242] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter [goid 1956] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine [goid 1963] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10818098] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9197268] [evidence TAS]; Any process that modulates the frequency, rate or extent of locomotion of a cell or organism [goid 40012] [evidence IEA]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IEA]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	PD1; NACP; PARK4; MGC110988; PARK1	PD1; NACP; PARK4; MGC110988; PARK1
Homo sapiens	RefSeq	NM_144623.2	ILMN_10024	FLJ32784	NM_144623.2	NM_144623.2		127731	68448500	NM_144623.2	FLJ32784	NP_653224.2	ILMN_1652243	0006110743	S	3972	GTGGTGGGGCTGGCATGGCTGGAGCACAGTTCGGCCTCCTACTTCACTGA	1	+	20553122-20553171	1p36.12b	Homo sapiens hypothetical protein FLJ32784 (FLJ32784), mRNA.				FLJ43845	FLJ43845
Homo sapiens	RefSeq	NM_145753.1	ILMN_23221	PHLDB2	NM_145753.1	NM_145753.1		90102	21955171	NM_145753.1	PHLDB2	NP_665696.1	ILMN_2179778	0003780441	S	5059	GACTTTGTCAGCCTGACTGGGTACAATTCTTTTGTTAATTTGCAGTGTGG	3	+	113177411-113177460	3q13.2a	Homo sapiens pleckstrin homology-like domain, family B, member 2 (PHLDB2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			LL5b; DKFZp686J05113; DKFZp313O2433; LL5beta; FLJ21791; DKFZp434G227	LL5b; DKFZp686J05113; DKFZp313O2433; LL5beta; FLJ21791; DKFZp434G227
Homo sapiens	RefSeq	NM_145753.1	ILMN_23221	PHLDB2	NM_145753.1	NM_145753.1		90102	21955171	NM_145753.1	PHLDB2	NP_665696.1	ILMN_1719792	0000610301	S	4582	GCTGAAGATTTCTCCATTCCTGGTGCTGAGAATAAAGGCAACCAGTAGCC	3	+	113176934-113176983	3q13.2a	Homo sapiens pleckstrin homology-like domain, family B, member 2 (PHLDB2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			LL5b; DKFZp686J05113; DKFZp313O2433; LL5beta; FLJ21791; DKFZp434G227	LL5b; DKFZp686J05113; DKFZp313O2433; LL5beta; FLJ21791; DKFZp434G227
Homo sapiens	RefSeq	NM_032149.1	ILMN_448	C4ORF17	NM_032149.1	NM_032149.1		84103	14149820	NM_032149.1	C4orf17	NP_115525.1	ILMN_1805730	0000870717	S	1287	CCTCCCAGGCCTAACACTCAGGAGAGTGGATCAGCAAAACCAGTGTCAGC	4	+	100463150-100463199	4q23b	Homo sapiens chromosome 4 open reading frame 17 (C4orf17), mRNA.				DKFZP434G072	DKFZP434G072
Homo sapiens	RefSeq	NM_000740.2	ILMN_170936	LOC730413	XM_001123368.1	XM_001123368.1		730413	113412637	XM_001123368.1	LOC730413	XP_001123368.1	ILMN_1710410	0006860315	S	2482	GGCGCAAGCAGCAGTACCAGCAGAGACAGTCGGTCATTTTTCACAAGCGC					PREDICTED: Homo sapiens similar to cholinergic receptor, muscarinic 3 (LOC730413), mRNA.					HM3
Homo sapiens	RefSeq	NM_000998.4	ILMN_15929	RPL37A	NM_000998.4	NM_000998.4		6168	78214519	NM_000998.4	RPL37A	NP_000989.1	ILMN_2051519	0000990273	S	78	CATGGCCAAACGTACCAAGAAAGTCGGGATCGTCGGTAAATACGGGACCC	2	+	217071842-217071842:217071843-217071845:217072238-217072283	2q35c	Homo sapiens ribosomal protein L37a (RPL37A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC74786	MGC74786
Homo sapiens	RefSeq	NM_144686.1	ILMN_10294	TMC4	NM_144686.1	NM_144686.1		147798	21389588	NM_144686.1	TMC4	NP_653287.1	ILMN_1803219	0001450348	S	2167	GCAGCCCACGTCCCGCTTTCAGACCCCAGGCCCATTGTAAGCCTAGGTCA	19	-	59355799-59355848	19q13.42a	Homo sapiens transmembrane channel-like 4 (TMC4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC39329	MGC39329
Homo sapiens	RefSeq	NM_001289.4	ILMN_162863	CLIC2	NM_001289.4	NM_001289.4		1193	66346732	NM_001289.4	CLIC2	NP_001280.3	ILMN_1795754	0004040192	S	2352	ACCAGGGGCTAGGGAGAGAAAGAAGGCAGAGGCACTGAAAGATGTTGGTC	X	-	154505784-154505833	Xq28h	Homo sapiens chloride intracellular channel 2 (CLIC2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16130169] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]	CLIC2b; XAP121	CLIC2b; XAP121
Homo sapiens	RefSeq	NR_031581.1	ILMN_388511	MIR764	NR_031581.1	NR_031581.1		100313838	269846980	NR_031581.1	MIR764		ILMN_3308240	0004780259	S	33	CATGCTTGGAAAATGCAGGGAGGAGGCCATAGTGGCAACTGTTACCATGA					Homo sapiens microRNA 764 (MIR764), microRNA.					
Homo sapiens	RefSeq	Hs.21639	ILMN_165438	SPEG	XM_001128413.1	XM_001128413.1		10290	113414262	XM_001128413.1	SPEG	XP_001128413.1	ILMN_1878273	0001440500	S	9765	CATCGGCTCTGCCACGGACATCTGGGGAGCGGGTGTGCTCACTTACATTA				2q35f	PREDICTED: Homo sapiens SPEG complex locus (SPEG), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8663449] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8663449] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8663449] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_926123.1	ILMN_36431	LOC642669	XM_926123.2	XM_926123.2		642669	113424517	XM_926123.2	LOC642669	XP_931216.1	ILMN_1769860	0000610707	S	7	TTGGATAATTGGCAGCTCAATGACAGTCAAGTGGAAACAACTGTCTGCTG	14	+	18812756-18812774:18812775-18812802:18828204-18828206	14q11.1d	PREDICTED: Homo sapiens hypothetical LOC642669 (LOC642669), mRNA.					
Homo sapiens	RefSeq	XM_928121.1	ILMN_137392	LOC645078	XM_928121.1	XM_928121.1		645078	88976659	XM_928121.1	LOC645078	XP_933214.1	ILMN_1782693	0002100075	S	1718	CTCATGTCTTTTTAATCATGCCCGAAAGCCCAATTCCTCTGGGAGGCAGG	4	+	110456513-110456562	4q25c	PREDICTED: Homo sapiens hypothetical protein LOC645078 (LOC645078), mRNA.					
Homo sapiens	RefSeq	NM_013448.2	ILMN_164018	BAZ1A	NM_013448.2	NM_013448.2		11177	32967602	NM_013448.2	BAZ1A	NP_038476.2	ILMN_1658327	0001240097	I	2121	CTGCACTGTCTGCAGTTGCATCTTTGGCAGCTGCATGGCCACAGTTACAC	14	-	35255335-35255384	14q13.2a	Homo sapiens bromodomain adjacent to zinc finger domain, 1A (BAZ1A), transcript variant 1, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	WALp1; hACF1; FLJ14383; DKFZP586E0518; ACF1; WCRF180	WALp1; hACF1; FLJ14383; DKFZP586E0518; ACF1; WCRF180
Homo sapiens	RefSeq	XR_039781.1	ILMN_338003	LOC100130289	XR_039781.1	XR_039781.1		100130289	169162646	XR_039781.1	LOC100130289		ILMN_3256445	0006960070	M	142	ACCTTGTGATAGATGAATGTGTGGAAATGGCGACTAGTGGACAACAGAAC	1	+	203587113-203587162	1q32.1g	PREDICTED: Homo sapiens misc_RNA (LOC100130289), miscRNA.					
Homo sapiens	RefSeq	XM_940317.1	ILMN_30806	LOC651192	XM_940317.1	XM_940317.1		651192	89057429	XM_940317.1	LOC651192	XP_945410.1	ILMN_1776995	0003840538	S	6307	AGCCTCCTAGGTGCTGGGATTACAGGTGTGAGCCGCTGTGTTCAGCCAAT					PREDICTED: Homo sapiens similar to Zinc finger protein 208 (LOC651192), mRNA.					
Homo sapiens	RefSeq	XM_040592.7	ILMN_165205	ZNF469	XM_001125745.1	XM_001125745.1		84627	113426226	XM_001125745.1	ZNF469	XP_001125745.1	ILMN_1794442	0002970753	A	12878	ACAGCGTCGTGCCTGTGAAGGTGGGTCAAAGGGTGAGAGGGCTTCCTTCT	16	+	87034341-87034390	16q24.2b	PREDICTED: Homo sapiens zinc finger protein 469 (ZNF469), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_939259.1	ILMN_165205	ZNF469	XM_001125745.1	XM_001125745.1		84627	113426226	XM_001125745.1	ZNF469	XP_001125745.1	ILMN_1789773	0006110372	I	1617	CAGCCAGGGCGGCTCCCCAGCACTGTTCACCTACAACGGAATGACAGACC	16	+	87022996-87023045	16q24.2b	PREDICTED: Homo sapiens zinc finger protein 469 (ZNF469), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_006213.2	ILMN_713	PHKG1	NM_006213.2	NM_006213.2		5260	33589819	NM_006213.2	PHKG1	NP_006204.1	ILMN_1682181	0002600750	S	1610	GGCCCAGAGTTACTGACACTCAGGCTTTCTTCCCTTAGGGTCACAGGGTG	7	-	56115878-56115927	7p11.2b	Homo sapiens phosphorylase kinase, gamma 1 (muscle) (PHKG1), mRNA.	An enzyme complex that catalyzes the phosphorylation of phosphorylase b to form phosphorylase a [goid 5964] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2297530] [evidence NAS]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: 4 ATP + 2 phosphorylase b = 4 ADP + phosphorylase a [goid 4689] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PHKG	PHKG
Homo sapiens	RefSeq	NM_002995.1	ILMN_169044	XCL1	NM_002995.1	NM_002995.1		6375	4506852	NM_002995.1	XCL1	NP_002986.1	ILMN_2224955	0000460168	S	832	CCAGTCTTCACTGGGTTCCCATTCTGAGGGTCCACTACTCAAAAATTTGC	1	+	166817549-166817598	1q24.2b	Homo sapiens chemokine (C motif) ligand 1 (XCL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 7602097] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 7602097] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7602097] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7602097] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 7602097] [evidence TAS]	SCM-1; SCM-1a; LPTN; SCYC1; SCM1; ATAC; LTN	SCM-1; SCM-1a; SCM1; LTN; LPTN; SCYC1; ATAC
Homo sapiens	RefSeq	NM_002995.1	ILMN_169044	XCL1	NM_002995.1	NM_002995.1		6375	4506852	NM_002995.1	XCL1	NP_002986.1	ILMN_1718792	0001690470	S	636	GGTAACCATAATGGAAGAGATTCTGGCTAGTGTCTATCAGAGGTGAAAGC	1	+	166817353-166817402	1q24.2b	Homo sapiens chemokine (C motif) ligand 1 (XCL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 7602097] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 7602097] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7602097] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7602097] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 7602097] [evidence TAS]	SCM-1; SCM-1a; LPTN; SCYC1; SCM1; ATAC; LTN	SCM-1; SCM-1a; SCM1; LTN; LPTN; SCYC1; ATAC
Homo sapiens	RefSeq	XM_001129200.2	ILMN_173783	LOC729065	XM_001129200.2	XM_001129200.2		729065	169166303	XM_001129200.2	LOC729065	XP_001129200.2	ILMN_3225577	0007320048	A	540	GAATCCAAATGGCAAATTCTCTGATGAGAAAGGGGATGTCCTCAGGGAGG	4	+	111937854-111937903	4q25d	PREDICTED: Homo sapiens hypothetical LOC729065 (LOC729065), mRNA.					
Homo sapiens	RefSeq	NM_023947.2	ILMN_19377	CHID1	NM_023947.2	NM_023947.2		66005	24431993	NM_023947.2	CHID1	NP_076436.2	ILMN_2069615	0000070240	S	2369	GGTTTAGAGTCAGTAATGTTAGGGCGCAGTGGGCAGGGGGTCAGGACATC	11	-	858713-858762	11p15.5c	Homo sapiens chitinase domain containing 1 (CHID1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues [goid 6032] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GL008; SI-CLP; MGC3234; FLJ42707	GL008; SI-CLP; MGC3234; FLJ42707
Homo sapiens	RefSeq	NM_178019.1	ILMN_23198	CATSPER3	NM_178019.1	NM_178019.1		347732	29789450	NM_178019.1	CATSPER3	NP_821138.1	ILMN_1693961	0006400279	S	1220	GCCCCAGGAGAAGCCCCAGTCCTTGGAAAAGGTGGATGAGAAGTAGCTGG	5	+	134345076-134345125	5q31.1e	Homo sapiens cation channel, sperm associated 3 (CATSPER3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC126741; CACRC	MGC126741; CACRC
Homo sapiens	RefSeq	NM_005393.1	ILMN_12467	PLXNB3	NM_005393.1	NM_005393.1		5365	10864080	NM_005393.1	PLXNB3	NP_005384.2	ILMN_1686313	0004060139	S	5805	GGTCGCCGCCCTGGTGGAAAACAAAGTGACTGACCTGTGAGCTCTGGCTC	X	+	152697649-152697688:152697689-152697698	Xq28f	Homo sapiens plexin B3 (PLXNB3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PLEXB3; PLEXR; FLJ76953; PLXN6	PLEXB3; PLEXR; FLJ76953; PLXN6
Homo sapiens	RefSeq	XM_929326.1	ILMN_37921	LOC646399	XM_929326.1	XM_929326.1		646399	89028151	XM_929326.1	LOC646399	XP_934419.1	ILMN_1689736	0000070220	S	61	TCGGGGATAAGTGACTCTGCTCCTTCGGCGGATCTTCAGCTCACCCTGAA	8	-	80363297-80363346		PREDICTED: Homo sapiens hypothetical protein LOC646399 (LOC646399), mRNA.					
Homo sapiens	RefSeq	NM_014859.3	ILMN_10794	KIAA0672	NM_014859.3	NM_014859.3		9912	50233869	NM_014859.3	KIAA0672	NP_055674.3	ILMN_2065022	0000110575	S	4039	CCCTCCTCTGAGAGTGGGATGTGCAGAGTTTTGATGTTGCAGCTTTGCTC	17	+	12835495-12835544	17p12c	Homo sapiens KIAA0672 gene product (KIAA0672), mRNA.					
Homo sapiens	RefSeq	NM_182574.1	ILMN_162307	FLJ36070	NM_182574.1	NM_182574.1		284358	32698969	NM_182574.1	FLJ36070	NP_872380.1	ILMN_1718770	0004640328	S	1709	GCAACTGCCTTAACTTTGCCTACCTGGCCTCCTTATGATCCCCCTCCGGC	19	-	53908131-53908180	19q13.33a	Homo sapiens likely ortholog of MEF2-activating SAP transcriptional regulator (FLJ36070), mRNA.				MASTR; MGC117259	MASTR; MGC117259
Homo sapiens	RefSeq	NM_001004341.1	ILMN_28469	ETV3L	NM_001004341.1	NM_001004341.1		440695	51972257	NM_001004341.1	ETV3L	NP_001004341.1	ILMN_1702657	0006380437	S	1757	CCCCATTCCAGGCTAAGGTCTCCAGTCCCTTTCTCACCCCTCCATGCAAC	1	-	157062005-157062054	1q23.1b	Homo sapiens ets variant 3-like (ETV3L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ16478	FLJ16478
Homo sapiens	RefSeq	XM_085367.7	ILMN_41273	KCTD19	XM_085367.7	XM_085367.7		146212	89040481	XM_085367.7	KCTD19	XP_085367.5	ILMN_1759260	0000730360	A	682	ACGGTGGCCCTCATCGAGTGCGAGTGCAGCGAGTTCCGCTTCATTGTGAA	16	-	65893322-65893326:65894550-65894594	16q22.1a-q22.1b	PREDICTED: Homo sapiens potassium channel tetramerisation domain containing 19 (KCTD19), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_001715265.1	ILMN_335535	LOC100132913	XM_001715265.1	XM_001715265.1		100132913	169162920	XM_001715265.1	LOC100132913	XP_001715317.1	ILMN_3236120	0004210520	S	535	AACGGGTGGCGGGGAAGAGAGGGGAGGAGAGCTCTGAGTGGGAAGCGGAA	1	-	120639754-120639803	1p12a	PREDICTED: Homo sapiens hypothetical protein LOC100132913 (LOC100132913), mRNA.					
Homo sapiens	RefSeq	NM_003203.3	ILMN_25801	C2ORF3	NM_003203.3	NM_003203.3		6936	44890064	NM_003203.3	C2orf3	NP_003194.3	ILMN_1699724	0004260296	S	4794	TGGAATAAGGAGGGGGAACACAACTAGCAAGAACAAAACATTGGGTTGGC	2	-	75743143-75743192	2p12i	Homo sapiens chromosome 2 open reading frame 3 (C2orf3), mRNA.				TCF9; GCF; DNABF	TCF9; GCF; DNABF
Homo sapiens	RefSeq	NM_001029954.1	ILMN_18497	CDNF	NM_001029954.2	NM_001029954.2		441549	82880673	NM_001029954.2	CDNF	NP_001025125.2	ILMN_1687291	0001510079	S	548	CATTCAAGAGCTGGCCCCCAAGTATGCAGCGACACACCCCAAAACAGAGC	10	-	14901989-14902038	10p13c	Homo sapiens cerebral dopamine neurotrophic factor (CDNF), mRNA.				cdnf	
Homo sapiens	RefSeq	NM_006509.2	ILMN_26715	RELB	NM_006509.2	NM_006509.2		5971	35493877	NM_006509.2	RELB	NP_006500.2	ILMN_1811258	0000730440	S	1930	CCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCTTCTGAA	19	+	45541112-45541161	19q13.32a	Homo sapiens v-rel reticuloendotheliosis viral oncogene homolog B (RELB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IEA]; The process whereby a relatively unspecialized T cell acquires the specialized features of a Th1 cell [goid 45063] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8188306] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 1577270] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15799966] [evidence IPI]	I-REL	I-REL
Homo sapiens	RefSeq	NM_203344.1	ILMN_1527	SERTAD3	NM_203344.1	NM_203344.1		29946	42741651	NM_203344.1	SERTAD3	NP_976219.1	ILMN_1813955	0006650379	I	109	TCGCAACGCTGTGGGCGTTCCAGGAGGTGGTCGTGGCGAACCTGGCAGCT	19	-	45641964-45642013	19q13.2b	Homo sapiens SERTA domain containing 3 (SERTAD3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16098148] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 16098148] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	RBT1	RBT1
Homo sapiens	RefSeq	NM_032229.2	ILMN_12042	SLITRK6	NM_032229.2	NM_032229.2		84189	40217824	NM_032229.2	SLITRK6	NP_115605.2	ILMN_1813197	0002900100	S	3978	GGCACTTCTAAAGGTAAGTGGTTTAAGTTGCCTCAAGAGAGGGACAATGT	13	-	86367075-86367124	13q31.1e	Homo sapiens SLIT and NTRK-like family, member 6 (SLITRK6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC119596; MGC119597; MGC119595	MGC119596; MGC119597; MGC119595
Homo sapiens	Unigene	Hs.436448	ILMN_91704	HS.436448	Hs.436448		Hs.436448		23689170	BU742545			ILMN_1906438	0003190719	S	583	CCCAGAAACGGGGCGGCGAATTAAAGTTACCTGCGCTCTTCACAGACGGC	16	-	85160104-85160153		UI-E-EO1-aiu-k-12-0-UI.s1 UI-E-EO1 Homo sapiens cDNA clone UI-E-EO1-aiu-k-12-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005811.2	ILMN_178893	GDF11	NM_005811.2	NM_005811.2		10220	11641418	NM_005811.2	GDF11	NP_005802.1	ILMN_1745132	0005310521	S	1233	ATGGTGGTGGATCGCTGTGGCTGCTCTTAAGGTGGGGGATAGAGGATGCC	12	+	54429905-54429933:54429934-54429954	12q13.2b	Homo sapiens growth differentiation factor 11 (GDF11), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10391213] [evidence TAS]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10075854] [evidence TAS]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [pmid 10075854] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	BMP11; BMP-11	BMP11; BMP-11
Homo sapiens	RefSeq	NM_080574.2	ILMN_6927	C20ORF70	NM_080574.2	NM_080574.2		140683	46309852	NM_080574.2	C20orf70	NP_542141.1	ILMN_1762670	0000450133	S	852	CATGCTGATTGGTTCCCAGTGGCTTGCCCCACCCCCTTATAGCATCTCCC	20	+	31232058-31232064:31232691-31232733	20q11.21c	Homo sapiens chromosome 20 open reading frame 70 (C20orf70), mRNA.				bA49G10.1; SPLUNC2	bA49G10.1; SPLUNC2
Homo sapiens	RefSeq	NM_014891.5	ILMN_15939	PDAP1	NM_014891.5	NM_014891.5		11333	51242950	NM_014891.5	PDAP1	NP_055706.1	ILMN_1693683	0001010601	S	2267	AGTTTTGGGAGTGGCAGCCCAGGATGGACAGCAGTGGGGAGGGAACCATT	7	-	98992655-98992704	7q22.1b	Homo sapiens PDGFA associated protein 1 (PDAP1), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8780057] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8780057] [evidence TAS]		PAP1; HASPP28; PAP	PAP1; HASPP28; PAP
Homo sapiens	RefSeq	NM_001013735.1	ILMN_167288	FOXB2	NM_001013735.1	NM_001013735.1		442425	61966922	NM_001013735.1	FOXB2	NP_001013757.1	ILMN_1765014	0004900692	S	1017	GGAGTATGGGGCCTTCGGGGTCCCGGTCAAGTCCCTGTGCCACTCGGCAA	9	+	78825407-78825456	9q21.13c	Homo sapiens forkhead box B2 (FOXB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	bA159H20.4	bA159H20.4
Homo sapiens	RefSeq	NM_001875.2	ILMN_15726	CPS1	NM_001875.2	NM_001875.2		1373	21361330	NM_001875.2	CPS1	NP_001866.2	ILMN_1792748	0006110044	S	5466	CTTGGCCCGAGTGAAATAATCAGATTTTTGTCATTCACACTCTCCCCCAG	2	+	211251797-211251846	2q34c	Homo sapiens carbamoyl-phosphate synthetase 1, mitochondrial (CPS1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 1840546] [evidence TAS]	The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of a reaction that results in the formation of carbamoyl phosphate [goid 4086] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: 2 ATP + NH3 + CO2 + H2O = 2 ADP + phosphate + carbamoyl phosphate [goid 4087] [pmid 1840546] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12620389] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Homo sapiens	RefSeq	NM_080603.3	ILMN_631	ZSWIM1	NM_080603.3	NM_080603.3		90204	60460880	NM_080603.3	ZSWIM1	NP_542170.3	ILMN_1812856	0004230286	S	2094	CTGACTCAGCCAGGCTCCCTGAACTTTTTTCCTTGTCCCATCCTGGGGTC	20	+	43947237-43947286	20q13.12b	Homo sapiens zinc finger, SWIM-type containing 1 (ZSWIM1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C20orf162	C20orf162
Homo sapiens	Unigene	Hs.545952	ILMN_109031	HS.545952	Hs.545952		Hs.545952		5813030	AI985753			ILMN_1855996	0006290646	S	65	CTCTGGGAAGGAGAAACATCGTATAGGCACTTTAATGAGAAAGCCCCACC	X	+	148253618-148253667		wr76h11.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2493669 3, mRNA sequence					
Homo sapiens	RefSeq	XR_037152.1	ILMN_336137	LOC643015	XR_037152.1	XR_037152.1		643015	169217298	XR_037152.1	LOC643015		ILMN_3200565	0000830392	A	2237	CCTCTCGGTGTCAAGAGAAACATGTCAGTGAGTACCTGGACCATCACTTA				Xq28c	PREDICTED: Homo sapiens misc_RNA (LOC643015), miscRNA.					
Homo sapiens	RefSeq	NM_001002917.1	ILMN_166252	OR8D1	NM_001002917.1	NM_001002917.1		283159	50897281	NM_001002917.1	OR8D1	NP_001002917.1	ILMN_1742753	0002690201	S	618	CACCTTGGTGCCCACCCTAGCTGTTGCTGTCTCCTATGCCTTCATCCTCT	11	-	124179995-124180044	11q24.2a	Homo sapiens olfactory receptor, family 8, subfamily D, member 1 (OR8D1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR8D3; OST004; PDJ9J14; JCG9	OR8D3; OST004; PDJ9J14; JCG9
Homo sapiens	RefSeq	NM_138731.2	ILMN_13839	MIPOL1	NM_138731.3	NM_138731.3		145282	141803378	NM_138731.3	MIPOL1	NP_620059.1	ILMN_1710684	0006280309	S	5589	GAGCTTGCACATTTAAACCAGCAGCATACGTTCCAGAAGAGCATCTCAAG	14	+	37089722-37089771	14q13.3b-q21.1a	Homo sapiens mirror-image polydactyly 1 (MIPOL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]			MGC34010; DKFZp313M2036	MGC34010; DKFZp313M2036
Homo sapiens	RefSeq	NM_005815.2	ILMN_23531	ZNF443	NM_005815.3	NM_005815.3		10224	141803001	NM_005815.3	ZNF443	NP_005806.1	ILMN_1774594	0003710291	S	1640	CGTTTCAGATACCTTTCTCGACATAAAAGGACTCACACAGGAGAGAAACC	19	-	12402391-12402440	19p13.2a	Homo sapiens zinc finger protein 443 (ZNF443), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9731181] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9731181] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZK1	ZK1
Homo sapiens	RefSeq	NM_203356.1	ILMN_162322	CTAGE5	NM_203356.2	NM_203356.2		4253	134053890	NM_203356.2	CTAGE5	NP_976231.1	ILMN_1754956	0005080187	I	89	CTACTTTTAGCTCCTCTTCTCGGAGGAAAACAGCACGCACCGCGCCAGGC	14	+	38805341-38805390	14q21.1b	Homo sapiens CTAGE family, member 5 (CTAGE5), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9356211] [evidence TAS]; Increases the activity of an enzyme [goid 8047] [pmid 9356211] [evidence TAS]	MEA6; MGEA; MGEA6; MGEA11	MEA6; cTAGE-5C; MGEA; MGEA6; cTAGE-5B; cTAGE-5D; CTAGE-5A; MGEA11
Homo sapiens	RefSeq	NM_001024382.1	ILMN_15879	HMBS	NM_001024382.1	NM_001024382.1		3145	66933008	NM_001024382.1	HMBS	NP_001019553.1	ILMN_1694476	0004730403	I	33	AGGTCCTACTATCGCCTCCCTCTAGTCTCTGCTTCTCTGGATCCCTGAGG	11	+	118463939-118463988	11q23.3e	Homo sapiens hydroxymethylbilane synthase (HMBS), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [evidence IEA]	Catalysis of the reaction: 4 porphobilinogen + H2O = hydroxymethylbilane + 4 NH3 [goid 4418] [pmid 2025226] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PBG-D; UPS; PBGD	PBG-D; UPS; PBGD
Homo sapiens	RefSeq	NM_000767.4	ILMN_25188	CYP2B6	NM_000767.4	NM_000767.4		1555	20522261	NM_000767.4	CYP2B6	NP_000758.1	ILMN_1657529	0003710497	S	2549	TCCCAGGCTGGAGTGCTATGGTGCAATTTTTGTTCACTGCAACCTCTGCC	19	+	41523798-41523847	19q13.2b	Homo sapiens cytochrome P450, family 2, subfamily B, polypeptide 6 (CYP2B6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence NAS]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	P450; CYP2B; CYPIIB6; IIB1; CPB6	P450; IIB1; CYP2B; CYPIIB6; CPB6
Homo sapiens	RefSeq	NM_016105.2	ILMN_5958	FKBP7	NM_181342.1	NM_181342.1		51661	31317230	NM_181342.1	FKBP7	NP_851939.1	ILMN_1717737	0001660014	A	1014	TGGGTCCCAGTGGGCATTTTTTCCCCTTTCAGGATGTAGGAGGACATGTA	2	-	179038444-179038493	2q31.2b	Homo sapiens FK506 binding protein 7 (FKBP7), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FKBP23; PPIase; MGC9420	FKBP23; PPIase; MGC9420
Homo sapiens	RefSeq	NM_133650.1	ILMN_28880	SYNE1	NM_133650.2	NM_133650.2		23345	154277119	NM_133650.2	SYNE1	NP_598411.2	ILMN_1687558	0002000722	I	73	AATATGATTTATAGACCACAGATAGGAATTAAGAGTTTCCTGATAATTTT	6	-	152542172-152542221	6q25.1c-q25.2a	Homo sapiens spectrin repeat containing, nuclear envelope 1 (SYNE1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 11792814] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12808039] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11792814] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [pmid 10878022] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [pmid 11792814] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [pmid 12808039] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [pmid 11792814] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 12408964] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [pmid 11801724] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	MYNE1; SCAR8; KIAA1756; dJ398G3.1; 8B; CPG2; KIAA0796; dJ398G3.2; DKFZp781J13156; RP3-398G3.1; RP11-809I23.2; nesprin-1; FLJ30878; KIAA1262; FLJ41140	MYNE1; KIAA1756; dJ398G3.1; 8B; CPG2; KIAA0796; DKFZp781J13156; RP3-398G3.1; RP11-809I23.2; nesprin-1; FLJ30878; SCAR8; dJ398G3.2; KIAA1262; FLJ41140
Homo sapiens	RefSeq	NM_207645.1	ILMN_10687	C11ORF87	NM_207645.2	NM_207645.2		399947	141801845	NM_207645.2	C11orf87	NP_997528.1	ILMN_1810376	0007510619	S	2237	CTGGATGAGAAATTCAGTGGTGCAGACCTGGCTTCTGCTGTTTCCAGAAG	11	+	108801432-108801481	11q22.3d	Homo sapiens chromosome 11 open reading frame 87 (C11orf87), mRNA.					
Homo sapiens	RefSeq	NM_148570.1	ILMN_24995	MRPL27	NM_148570.1	NM_148570.1		51264	22547128	NM_148570.1	MRPL27	NP_683411.1	ILMN_1753976	0001570328	I	32	CACTTGTCTTTCTCCTGCCTCAGCAGCACGGACGGGTTCCTTGGCGGTTG	17	-	45805239-45805288	17q21.33b	Homo sapiens mitochondrial ribosomal protein L27 (MRPL27), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [pmid 11279069] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11279069] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11279069] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC23716; L27mt	MGC23716; L27mt
Homo sapiens	RefSeq	NM_033013.1	ILMN_12730	NR1I2	NM_033013.1	NM_033013.1		8856	14702163	NM_033013.1	NR1I2	NP_148934.1	ILMN_2323338	0002650113	A	3985	CTTGATGGGGCCTGGGTTTGTTCCTGGGGCTGGAATGCTGGGTATGCTCT	3	+	121019701-121019750	3q13.33a	Homo sapiens nuclear receptor subfamily 1, group I, member 2 (NR1I2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [pmid 9784494] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9784494] [evidence TAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 9784494] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11891224] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9727070] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 11891224] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PAR; PRR; SAR; PAR1; ONR1; BXR; SXR; PXR; PAR2; PARq	PAR; PRR; SAR; PAR1; ONR1; BXR; SXR; PXR; PAR2; PARq
Homo sapiens	RefSeq	NM_031904.3	ILMN_3387	FRMD8	NM_031904.3	NM_031904.3		83786	153285459	NM_031904.3	FRMD8	NP_114110.1	ILMN_3241870	0006510408	S	3527	TTCTTCTCTGATGGGCGGGCGAGGGTGTGTTCGTGTGATGGGTTGGAGTG	11	+	64937347-64937396	11q13.1c	Homo sapiens FERM domain containing 8 (FRMD8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC31785; FKSG44; FLJ32216; FLJ90369	MGC31785; FLJ32216
Homo sapiens	RefSeq	XM_001718943.1	ILMN_339835	LOC100134409	XM_001718943.1	XM_001718943.1		100134409	169217789	XM_001718943.1	LOC100134409	XP_001718995.1	ILMN_3239490	0001740037	S	564	GCATTGTGGGGGAAAGAATGGCAGTTCTCCGCTGTGTGGAGTCTCTCACC					PREDICTED: Homo sapiens similar to putative DUX4 protein (LOC100134409), mRNA.					
Homo sapiens	Unigene	Hs.551803	ILMN_110721	HS.551803	Hs.551803		Hs.551803		5394039	AI807473			ILMN_1891042	0003710672	S	101	CTAGATGGGTGCTGTGTCCATGCATCGTGGTTGGTGCAGTTTTGCCCGCG	9	-	136552958-136553007		wf48b12.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2358815 3, mRNA sequence					
Homo sapiens	RefSeq	NM_181353.1	ILMN_28002	ID1	NM_181353.1	NM_181353.1		3397	31317296	NM_181353.1	ID1	NP_851998.1	ILMN_1665832	0000580692	I	712	TCGGAGCGGCGTCCCTTCCAACCCGCCGGTCTCATTTCTTCTCGTTTTCA	20	+	29657464-29657513	20q11.21b	Homo sapiens inhibitor of DNA binding 1, dominant negative helix-loop-helix protein (ID1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17855368] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15694377] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17891176] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	ID	ID
Homo sapiens	RefSeq	NM_181353.1	ILMN_28002	ID1	NM_181353.1	NM_181353.1		3397	31317296	NM_181353.1	ID1	NP_851998.1	ILMN_1664861	0000670386	A	901	TGAGGGAGAACAAGACCGATCGGCGGCCACTGCGCCCTTAACTGCATCCA	20	+	29657653-29657702	20q11.21b	Homo sapiens inhibitor of DNA binding 1, dominant negative helix-loop-helix protein (ID1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17855368] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15694377] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17891176] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	ID	ID
Homo sapiens	RefSeq	NM_173852.3	ILMN_11150	KRTCAP2	NM_173852.3	NM_173852.3		200185	56676325	NM_173852.3	KRTCAP2	NP_776251.1	ILMN_1658802	0006110605	S	456	GCAGCAGCTCCAGTCCTCACACCAGCCAAGGTCACAGGCAAGAGCAAGAA	1	-	155141925-155141974	1q22a	Homo sapiens keratinocyte associated protein 2 (KRTCAP2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KCP2	KCP2
Homo sapiens	RefSeq	NM_024511.4	ILMN_27940	C4ORF15	NM_024511.4	NM_024511.4		79441	56711323	NM_024511.4	C4orf15	NP_078787.2	ILMN_2160124	0000020296	S	4952	GCATGTAGACAGATGAAGCCCAGCTCCCGCCCCTTTTACACTCATTCAGT	4	-	2200492-2200541	4p16.3b	Homo sapiens chromosome 4 open reading frame 15 (C4orf15), mRNA.				MGC4701; IT1; DKFZp686I1868	MGC4701; IT1; DKFZp686I1868
Homo sapiens	RefSeq	NM_001039954.2	ILMN_43705	MT1P2	NM_001039954.2	NM_001039954.2		645745	96974986	NM_001039954.2	MT1P2	NP_001035043.2	ILMN_2171396	0001580491	S	237	GGGACTGCCCTGCTCTCGGATGAAAACAGAATGACACGTAAAGTCCGGGA				1q43a	Homo sapiens metallothionein 1 pseudogene 2 (MT1P2), mRNA.					
Homo sapiens	RefSeq	NM_012344.2	ILMN_169717	NTSR2	XM_001129997.1	XM_001129997.1		23620	113413696	XM_001129997.1	NTSR2	XP_001129997.1	ILMN_1761280	0003130121	A	746	AGCAGGTGAGCAACCTCATCACTAATCATTCAAGCTTCGCAGCCAGGGCG				2p25.1b	PREDICTED: Homo sapiens neurotensin receptor 2 (NTSR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9851594] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [pmid 8795617] [evidence TAS]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; G-protein coupled receptor for the tridecapeptide neurotensin. Associated with G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [goid 16492] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; G-protein coupled receptor for the tridecapeptide neurotensin. Associated with G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [goid 16492] [evidence IEA]		NTR2
Homo sapiens	RefSeq	XM_939298.1	ILMN_169717	NTSR2	XM_001129997.1	XM_001129997.1		23620	113413696	XM_001129997.1	NTSR2	XP_001129997.1	ILMN_1716724	0000150079	I	28	TCCAGCAAGTGGGAGCCGCTTGAGGACCTGTTTGAATCTGAGGACTGCAA				2p25.1b	PREDICTED: Homo sapiens neurotensin receptor 2 (NTSR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9851594] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [pmid 8795617] [evidence TAS]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; G-protein coupled receptor for the tridecapeptide neurotensin. Associated with G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [goid 16492] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; G-protein coupled receptor for the tridecapeptide neurotensin. Associated with G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) [goid 16492] [evidence IEA]		
Homo sapiens	Unigene	Hs.581914	ILMN_134095	HS.581914	Hs.581914		Hs.581914		83129102	DB337520			ILMN_1889508	0006060544	S	239	CCAAACATAGCGCCACAGTCTGGGTCTTCACATCTTGGCCAGGTTTCTGA	4	+	41240467-41240509:41241989-41241995		DB337520 TESTI2 Homo sapiens cDNA clone TESTI2022890 3, mRNA sequence					
Homo sapiens	RefSeq	NM_152751.2	ILMN_21078	BEND7	NM_152751.2	NM_152751.2		222389	155029541	NM_152751.2	BEND7	NP_689964.2	ILMN_3178043	0000580279	A	1046	CAAACTACACTCGCTCAGGAAGCCTTCTGTTTAGAAAACTGGTGTGTGCG	10	-	13563013-13563062	10p13d	Homo sapiens BEN domain containing 7 (BEND7), transcript variant 1, mRNA.				MGC35247; FLJ40283	MGC35247; FLJ40283
Homo sapiens	RefSeq	NM_152751.2	ILMN_21078	BEND7	NM_152751.2	NM_152751.2		222389	155029541	NM_152751.2	BEND7	NP_689964.2	ILMN_3230853	0002850673	I	2069	GCGCTCTCCTTTCCGCTGTATCCCATTGTCTTAGATCACGTGGACTTGCC	10	-	13534674-13534723	10p13d	Homo sapiens BEN domain containing 7 (BEND7), transcript variant 1, mRNA.				MGC35247; FLJ40283	MGC35247; FLJ40283
Homo sapiens	RefSeq	NM_001994.1	ILMN_179908	F13B	NM_001994.2	NM_001994.2		2165	110611236	NM_001994.2	F13B	NP_001985.2	ILMN_1735489	0006580519	S	1356	CGTTGCGAACAAGGAAAATGGTCATCCCCACCTGTTTGCTTGGAACCATG	1	-	197021957-197021964:197024845-197024886	1q31.3c	Homo sapiens coagulation factor XIII, B polypeptide (F13B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2866798] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 2334637] [evidence TAS]		FXIIIB	FXIIIB
Homo sapiens	Unigene	Hs.562641	ILMN_115701	HS.562641	Hs.562641		Hs.562641		23658513	BU732526			ILMN_1896071	0001070403	S	274	TGACTGACCTTAACCTCCAGCACCTCCGCACGTCAAGCTGATGCCCTGTG	16	+	83898829-83898878		UI-E-CQ1-afx-j-12-0-UI.s1 UI-E-CQ1 Homo sapiens cDNA clone UI-E-CQ1-afx-j-12-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_943249.1	ILMN_37813	LOC648257	XM_943249.1	XM_943249.1		648257	89037714	XM_943249.1	LOC648257	XP_948342.1	ILMN_1661230	0005860220	S	1	ATGTCGAGGAGGGACAAGATTGAGTGGCCCCCTGCCAGTAGGCAGCCACA					PREDICTED: Homo sapiens hypothetical protein LOC648257 (LOC648257), mRNA.					
Homo sapiens	RefSeq	NM_002111.6	ILMN_32873	HTT	NM_002111.6	NM_002111.6		3064	90903230	NM_002111.6	HTT	NP_002102.4	ILMN_3239435	0003990612	S	13127	GAACGCCTTCCCCTCAGTTGTTTCTAAGAGCAGAGTCTCCCGCTGCAATC	4	+	3194011-3194012:3194931-3194978	4p16.3a-p16.2c	Homo sapiens huntingtin (HTT), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7568002] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9778247] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7568002] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15837803] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 8696339] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9778247] [evidence TAS]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [pmid 7774020] [evidence TAS]; The set of specific processes that generate the ability of an organism to cause disease in another [goid 9405] [pmid 10353249] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 7774020] [evidence TAS]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10823891] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 7568002] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7477378] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 7568002] [evidence TAS]	HTT; IT15	IT15; HTT
Homo sapiens	RefSeq	XR_037069.1	ILMN_333905	LOC441730	XR_037069.1	XR_037069.1		441730	169209066	XR_037069.1	LOC441730		ILMN_3197823	0004560286	A	2629	CTGGCACTGTGGGCCCTGGACCAAGTGTACAGTCACCTGTGGCAGAGGTG				15q25.2a	PREDICTED: Homo sapiens misc_RNA (LOC441730), miscRNA.					
Homo sapiens	RefSeq	XM_001719583.1	ILMN_343573	LOC100129000	XM_001719583.1	XM_001719583.1		100129000	169171763	XM_001719583.1	LOC100129000	XP_001719635.1	ILMN_3186462	0002600563	A	245	TTATCCGCACCCAGCTATTAGTCGTAGGCTCGCAGGACTACAATCCCAGC				7q11.21b	PREDICTED: Homo sapiens similar to hCG1647535, transcript variant 1 (LOC100129000), mRNA.					
Homo sapiens	RefSeq	XR_042114.1	ILMN_339899	BASE	XR_042114.1	XR_042114.1		317716	169214691	XR_042114.1	BASE		ILMN_3182301	0007380630	A	122	GGGCAGACTTTCTTCCCAGCCTGCAGACAACTGGCCTCCAGAAACCATTG	20	+	31250803-31250852	20q11.21c	PREDICTED: Homo sapiens misc_RNA (BASE), miscRNA.					
Homo sapiens	Unigene	Hs.439363	ILMN_92141	HS.439363	Hs.439363		Hs.439363		21733437	AL832853			ILMN_1859036	0002710128	S	2142	GGTTGGCAATACTCTGGTGTGTTCTAGGAGGGTGACATGTCCCTGAGGGC					Homo sapiens mRNA; cDNA DKFZp667K0825 (from clone DKFZp667K0825)					
Homo sapiens	RefSeq	XM_928712.1	ILMN_44548	LOC645701	XM_928712.1	XM_928712.1		645701	89027833	XM_928712.1	LOC645701	XP_933805.1	ILMN_1748060	0006660424	S	1	TCCGGCCTATTTCTCTGCAGCGCTCCTTCCCTGGCCCGGAGACGGAAAGG	8	-	7649511-7649560		PREDICTED: Homo sapiens hypothetical protein LOC645701 (LOC645701), mRNA.					
Homo sapiens	RefSeq	NM_031490.2	ILMN_27427	LONP2	NM_031490.2	NM_031490.2		83752	31377666	NM_031490.2	LONP2	NP_113678.2	ILMN_2216265	0003450440	S	4230	TAGTCCAGCTACTTGAGGCTGAGATGGGAGGATGAGGGAGGTCGGGGCTG	16	+	46944796-46944845	16q12.1a-q12.1b	Homo sapiens lon peptidase 2, peroxisomal (LONP2), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 14561759] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	LONP; MGC4840; LONPL	LONP; MGC4840; LONPL
Homo sapiens	RefSeq	NM_031490.2	ILMN_27427	LONP2	NM_031490.2	NM_031490.2		83752	31377666	NM_031490.2	LONP2	NP_113678.2	ILMN_1691480	0000670639	S	3765	GGTAGATGTCCATGCCCATGTGCTCCTGCTGGGACTCAATTCAGGCTATG	16	+	46944331-46944380	16q12.1a-q12.1b	Homo sapiens lon peptidase 2, peroxisomal (LONP2), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 14561759] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the hydrolysis of peptide bonds [goid 4176] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	LONP; MGC4840; LONPL	LONP; MGC4840; LONPL
Homo sapiens	RefSeq	NM_054026.1	ILMN_7214	CNOT7	NM_013354.5	NM_013354.5		29883	85067506	NM_013354.5	CNOT7	NP_037486.2	ILMN_1656134	0003120176	A	954	GAACGGATAGGACCACAACATCAGGCAGGATCTGATTCATTGCTCACAGG	8	-	17134331-17134380	8p22b	Homo sapiens CCR4-NOT transcription complex, subunit 7 (CNOT7), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9820826] [evidence IDA]; A large multimeric transcription factor complex that can regulate transcription positively or negatively; consists of a core complex plus additional proteins; may interact with other proteins to control initiation of transcription. In Saccharomyces the core complex comprises Ccr4p, Caf1p, Not1p, Not2p, Not3p, Not4p, and Not5p; Caf4p, Caf16p, and several less well characterized proteins [goid 30014] [pmid 9820826] [evidence NAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9820826] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9820826] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9820826] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9820826] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9820826] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	CAF1; hCAF-1	CAF1; hCAF-1
Homo sapiens	RefSeq	NM_013354.4	ILMN_7214	CNOT7	NM_013354.5	NM_013354.5		29883	85067506	NM_013354.5	CNOT7	NP_037486.2	ILMN_1715886	0004590241	I	1817	AGTGTCTGTCAGTTTCTAATTGGCATGTGTAGGCTGCTCTGTGACTGAAG	8	-	17131890-17131939	8p22b	Homo sapiens CCR4-NOT transcription complex, subunit 7 (CNOT7), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9820826] [evidence IDA]; A large multimeric transcription factor complex that can regulate transcription positively or negatively; consists of a core complex plus additional proteins; may interact with other proteins to control initiation of transcription. In Saccharomyces the core complex comprises Ccr4p, Caf1p, Not1p, Not2p, Not3p, Not4p, and Not5p; Caf4p, Caf16p, and several less well characterized proteins [goid 30014] [pmid 9820826] [evidence NAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9820826] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9820826] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9820826] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9820826] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9820826] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	CAF1; hCAF-1	CAF1; hCAF-1
Homo sapiens	RefSeq	NM_001006657.1	ILMN_175554	WDR35	NM_001006657.1	NM_001006657.1		57539	55743160	NM_001006657.1	WDR35	NP_001006658.1	ILMN_1789879	0002690484	A	6053	CTTTTGGAGGCTTCTCATTTCCCCCTAATTCTGTGCTGCCTGAGCCCTAG	2	-	20110870-20110919	2p24.1d	Homo sapiens WD repeat domain 35 (WDR35), transcript variant 1, mRNA.				KIAA1336; MGC33196	KIAA1336; MGC33196
Homo sapiens	RefSeq	NM_001977.2	ILMN_22750	ENPEP	NM_001977.3	NM_001977.3		2028	132814466	NM_001977.3	ENPEP	NP_001968.3	ILMN_1675325	0004560672	S	3259	CTCCTCTGAAGCATTTGGTGGCCTAATTTACAAGCACGATGGAGAGAGCC	4	+	111482757-111482806	4q25d	Homo sapiens glutamyl aminopeptidase (aminopeptidase A) (ENPEP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8346219] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8244382] [evidence TAS]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8346219] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 14998491] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 14998491] [evidence IDA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 8244382] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [pmid 8244382] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	APA; gp160; CD249	APA; gp160; CD249
Homo sapiens	Unigene	Hs.407822	ILMN_90037	HS.407822	Hs.407822		Hs.407822		81228960	DB041920			ILMN_1849842	0006900519	S	414	GAGTGATAGCAGAAAGTCATTGTTGATCATCAGATCTAGGGCTGGAGTGC	14	-	79479316-79479365		DB041920 TESTI2 Homo sapiens cDNA clone TESTI2029126 5, mRNA sequence					
Homo sapiens	RefSeq	NM_006110.1	ILMN_9406	CD2BP2	NM_006110.1	NM_006110.1		10421	5174408	NM_006110.1	CD2BP2	NP_006101.1	ILMN_1796244	0002490066	S	1158	GCCCAGTTTGGTGGGCCCTTCTTTCCTGGACTTTGTGGAGGAGGCACCAA	16	-	30271746-30271795	16p11.2d	Homo sapiens CD2 (cytoplasmic tail) binding protein 2 (CD2BP2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9843987] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FWP010; LIN1; Snu40	FWP010; LIN1; Snu40
Homo sapiens	RefSeq	NM_014487.2	ILMN_6878	ZNF330	NM_014487.3	NM_014487.3		27309	142385621	NM_014487.3	ZNF330	NP_055302.1	ILMN_1710873	0001340259	S	1110	CTCACTATGAGGAACAAGAGAACTAGGGGAGCTGCTCTGGTGGCCGTGTG	4	+	142374568-142374593:142374594-142374617	4q31.21a	Homo sapiens zinc finger protein 330 (ZNF330), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [pmid 10593942] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10593942] [evidence IDA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 10593942] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [pmid 10593942] [evidence NAS]	NOA36; HSA6591	NOA36; HSA6591
Homo sapiens	RefSeq	XM_939558.1	ILMN_39511	LOC650468	XM_939558.2	XM_939558.2		650468	113431172	XM_939558.2	LOC650468	XP_944651.2	ILMN_1665870	0000050328	S	183	CTGTACAAGTAAGAAGAATCAAGTAGGACAGGTGTCTTCGACTCTCAGGT					PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein isoform 1 (LOC650468), mRNA.					
Homo sapiens	RefSeq	XM_930645.1	ILMN_183298	HTR2C	NM_000868.1	NM_000868.1		3358	4504540	NM_000868.1	HTR2C	NP_000859.1	ILMN_1660097	0001230379	S	44	CTTCCTCAGATGCACCGATCTTCCCGATACTGCCTTTGGAGCGGCTAGAT	X	+	113724850-113724899	Xq23c	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 2C (HTR2C), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9241279] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [pmid 7700379] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16319069] [evidence IPI]	HTR1C; 5-HT2C	
Homo sapiens	RefSeq	NM_001844.3	ILMN_8700	COL2A1	NM_001844.3	NM_001844.3		1280	15149477	NM_001844.3	COL2A1	NP_001835.2	ILMN_1674785	0004010136	A	4722	GACCTGATGTCCATTCATCCCACCCTCTCACAGTTCGGACTTTTCTCCCC	12	-	46653306-46653355	12q13.11c	Homo sapiens collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital) (COL2A1), transcript variant 1, mRNA.	Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9468540] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]	COL11A3; SEDC	COL11A3; SEDC
Homo sapiens	RefSeq	NM_000588.3	ILMN_181232	IL3	NM_000588.3	NM_000588.3		3562	28416914	NM_000588.3	IL3	NP_000579.2	ILMN_1766320	0006040332	S	494	GAGCCTCGCGATCTTTTGAGTCCAACGTCCAGCTCGTTCTCTGGGCCTTC	5	+	131398466-131398484:131398485-131398515	5q31.1b	Homo sapiens interleukin 3 (colony-stimulating factor, multiple) (IL3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 3497400] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9736740] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42523] [pmid 9722506] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 9722506] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-3 receptor [goid 5135] [pmid 2544122] [evidence TAS]	MGC79399; MCGF; MULTI-CSF; IL-3; MGC79398	MGC79399; MCGF; MULTI-CSF; IL-3; MGC79398
Homo sapiens	RefSeq	XM_001719035.1	ILMN_349822	LOC100129657	XM_001719035.1	XM_001719035.1		100129657	169165784	XM_001719035.1	LOC100129657	XP_001719087.1	ILMN_3193623	0000580626	A	102	CTTCGTGTTCACTTTAAGAACACTCGTGGAACTGCTCAGGCCACCAAGGG				3q29i	PREDICTED: Homo sapiens hypothetical protein LOC100129657 (LOC100129657), mRNA.					
Homo sapiens	RefSeq	NM_023016.2	ILMN_169270	ANKRD57	NM_023016.3	NM_023016.3		65124	95147339	NM_023016.3	ANKRD57	NP_075392.2	ILMN_1724040	0002510224	S	4529	CTAGTTTTTTCACGCCTGCAATCTTGGAGTCTAGGTTGCCTTGTCTCTCC	2	+	109733728-109733777	2q13a	Homo sapiens ankyrin repeat domain 57 (ANKRD57), mRNA.				C2orf26	
Homo sapiens	RefSeq	NM_001012339.2	ILMN_165823	DNAJC21	NM_194283.3	NM_194283.3		134218	68077167	NM_194283.3	DNAJC21	NP_919259.3	ILMN_1711089	0000650367	A	5497	CAGTTAAAGTAGTGTGTGGCTGGTGCCAGTAGAGGTCAGTCAAGGGATCC	5	+	34958358-34958407	5p13.2d	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 21 (DNAJC21), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		JJJ1; DNAJA5; GS3
Homo sapiens	RefSeq	NM_194283.3	ILMN_165823	DNAJC21	NM_194283.3	NM_194283.3		134218	68077167	NM_194283.3	DNAJC21	NP_919259.3	ILMN_1714563	0004830692	I	1440	CCTGCAGCTCACTTTCAGATGGCTTGGGGAAAAAAGTGTGTGTTGGGAGA	5	+	34949675-34949724	5p13.2d	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 21 (DNAJC21), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		JJJ1; DNAJA5; GS3
Homo sapiens	Unigene	Hs.570229	ILMN_122410	HS.570229	Hs.570229		Hs.570229		11937778	BF663883			ILMN_1873838	0007050201	S	259	CCCACCTCGATTCAGTGGCAGCGGGTATGGAACAGATTTTACCCTCACAA	2	-	88977920-88977962:88977966-88977972		602145539F1 NIH_MGC_48 Homo sapiens cDNA clone IMAGE:4309424 5, mRNA sequence					
Homo sapiens	RefSeq	NM_006252.2	ILMN_162933	PRKAA2	NM_006252.2	NM_006252.2		5563	46877067	NM_006252.2	PRKAA2	NP_006243.2	ILMN_1668778	0001770577	S	2253	CTGCCTAGTGTATTCAACAGAAGGACTGTGGTCATGTAACAGGTAACCAC	1	+	56946527-56946576	1p32.2c	Homo sapiens protein kinase, AMP-activated, alpha 2 catalytic subunit (PRKAA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10698692] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15060529] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7959015] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7959015] [evidence TAS]; Any process that modulates the frequency, rate or extent of fatty acid oxidation [goid 46320] [pmid 16054041] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AMPK; PRKAA; AMPK2	AMPK; PRKAA; AMPK2
Homo sapiens	RefSeq	XM_933398.1	ILMN_35890	LOC646097	XM_933398.1	XM_933398.1		646097	89052416	XM_933398.1	LOC646097	XP_938491.1	ILMN_1720365	0005390022	S	285	CGCGGCCTCTGCAGTCGGTCACATGTCCCCACGCTGCGCGGGGTCCGCGT	19	-	10057771-10057820		PREDICTED: Homo sapiens hypothetical protein LOC646097 (LOC646097), mRNA.					
Homo sapiens	RefSeq	NM_005188.2	ILMN_15749	CBL	NM_005188.2	NM_005188.2		867	52426744	NM_005188.2	CBL	NP_005179.2	ILMN_1716080	0004120037	S	10613	GGGAAGGGCAGCAAGGAACATGGGACCAGAAGCCTGTCCTCAGTAATGTG	11	+	118683455-118683504	11q23.3e	Homo sapiens Cas-Br-M (murine) ecotropic retroviral transforming sequence (CBL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8621719] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14505571] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11823423] [evidence EXP]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16407834] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12593796] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15465819] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11894095] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10567358] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12218189] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15475003] [evidence EXP]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 15465819] [evidence TAS]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 15465819] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 15465819] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport [goid 48260] [pmid 15465819] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2030914] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 16407834] [evidence EXP]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 12593796] [evidence EXP]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 15465819] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 12218189] [evidence EXP]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11891219] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	C-CBL; CBL2; RNF55	C-CBL; CBL2; RNF55
Homo sapiens	RefSeq	XM_929767.1	ILMN_39046	LOC646812	XM_929767.1	XM_929767.1		646812	88998813	XM_929767.1	LOC646812	XP_934860.1	ILMN_1756985	0000510601	S	1827	AGTTCCGGCTACTATTATGGGACTCAGTATTGGTGCTGCGGTTGCGGTCC	6	-	1291524-1291573		PREDICTED: Homo sapiens similar to ATPase, Cu++ transporting, beta polypeptide isoform b (LOC646812), mRNA.					
Homo sapiens	RefSeq	NM_002646.2	ILMN_24948	PIK3C2B	NM_002646.2	NM_002646.2		5287	15451925	NM_002646.2	PIK3C2B	NP_002637.2	ILMN_2117323	0004610180	S	7283	CCATAACTGGAGAAAGAAGCTCCATTGACCGAAGCCACAGGGCAGCATGG	1	-	202658654-202658703	1q32.1f	Homo sapiens phosphoinositide-3-kinase, class 2, beta polypeptide (PIK3C2B), mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence NAS]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10805725] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate [goid 35005] [pmid 9830063] [evidence NAS]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	DKFZp686G16234; C2-PI3K	DKFZp686G16234; C2-PI3K
Homo sapiens	RefSeq	XM_931776.1	ILMN_35162	LOC440080	XM_931776.1	XM_931776.1		440080	89035284	XM_931776.1	LOC440080	XP_936869.1	ILMN_1721478	0005490338	I	745	CCCCATAGTCTTATCCAGAAGCAGGAAACTGAGCTAGAAGTTCTCCTGGG	12	-	9444606-9444655		PREDICTED: Homo sapiens similar to cDNA sequence BC048546, transcript variant 7 (LOC440080), mRNA.					
Homo sapiens	RefSeq	NM_014223.2	ILMN_5936	NFYC	NM_014223.2	NM_014223.2		4802	11496977	NM_014223.2	NFYC	NP_055038.2	ILMN_1810488	0003290475	S	1607	GGAACAGCTGCTACCCCCAAGACTTGCCACGTTGTTCTGCCCTCAGATGG	1	+	41009504-41009553	1p34.2c	Homo sapiens nuclear transcription factor Y, gamma (NFYC), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15243141] [evidence IDA]; A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; in Saccharomyces it activates the transcription of genes in response to growth in a nonfermentable carbon source; consists of four known subunits: HAP2, HAP3, HAP4 and HAP5 [goid 16602] [pmid 15243141] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10446203] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 10446203] [evidence TAS]	Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9332362] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10446203] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10446203] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10446203] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12401788] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HAP5; NF-YC; hCBF-C; DKFZp667G242; H1TF2A; CBFC; CBF-C; HSM; FLJ45775	HAP5; NF-YC; hCBF-C; DKFZp667G242; H1TF2A; CBFC; CBF-C; HSM; FLJ45775
Homo sapiens	RefSeq	NM_014818.1	ILMN_369934	TRIM66	NM_014818.1	NM_014818.1		9866	209977096	NM_014818.1	TRIM66	NP_055633.1	ILMN_3235584	0003840110	S	9616	GGCCCTTGTTAGGAGTGGCTATTGGATTCTAAGCGGTTGGGGCATGAGGG	11	-	8633671-8633720	11p15.4b	Homo sapiens tripartite motif-containing 66 (TRIM66), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A region at which the centric regions of polytene chromosomes are joined together [goid 5701] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001010979.1	ILMN_10361	C1ORF189	NM_001010979.1	NM_001010979.1		388701	58293780	NM_001010979.1	C1orf189	NP_001010979.1	ILMN_1790713	0006510014	S	136	TGGCATTGGGCCAGAGAAGAAACCCGTATGCCACCCTAAGGATGCAGGAC	1	-	154172979-154173028	1q21.3d	Homo sapiens chromosome 1 open reading frame 189 (C1orf189), mRNA.					
Homo sapiens	RefSeq	NM_033030.3	ILMN_20692	BOLL	NM_033030.3	NM_033030.3		66037	37574729	NM_033030.3	BOLL	NP_149019.1	ILMN_1759369	0002030349	A	1209	GATCCTTGCGTGGCCGAGATCCAGCTTCAACGAACCAGCTAGAAGCTGCC	2	-	198301427-198301476	2q33.1b	Homo sapiens bol, boule-like (Drosophila) (BOLL), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11390979] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 12499397] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of translational initiation [goid 45948] [pmid 16001084] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16001084] [evidence IPI]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [pmid 16001084] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BOULE	BOULE
Homo sapiens	RefSeq	NM_033030.3	ILMN_20692	BOLL	NM_033030.3	NM_033030.3		66037	37574729	NM_033030.3	BOLL	NP_149019.1	ILMN_1781833	0004920703	I	174	TCGGTGCCCAAGTTCACGATGACCCGAGAGAACTCGAGGAAGTTGTCGCC	2	-	198358096-198358145	2q33.1b	Homo sapiens bol, boule-like (Drosophila) (BOLL), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11390979] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 12499397] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of translational initiation [goid 45948] [pmid 16001084] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16001084] [evidence IPI]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [pmid 16001084] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BOULE	BOULE
Homo sapiens	RefSeq	NM_018980.2	ILMN_23037	TAS2R5	NM_018980.2	NM_018980.2		54429	67944637	NM_018980.2	TAS2R5	NP_061853.1	ILMN_1752867	0000150592	S	853	GGCCAGCCCCTTCTCCATCACCTCCAAGACTTATCCTCCTGATCTCACCA	7	+	141137338-141137387	7q34e	Homo sapiens taste receptor, type 2, member 5 (TAS2R5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10761934] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10761934] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [pmid 10761935] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [pmid 10761934] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 10761934] [evidence TAS]	T2R5; MGC126637; MGC126635	T2R5; MGC126637; MGC126635
Homo sapiens	RefSeq	NM_016219.2	ILMN_27649	MAN1B1	NM_016219.2	NM_016219.2		11253	51477712	NM_016219.2	MAN1B1	NP_057303.1	ILMN_1771957	0001780661	S	2613	CAGGGCTGGCTCTGGTGTTTACAAGCTGGACTCAGGGATCCTCCTGGCCG	9	+	139123304-139123353	9q34.3e	Homo sapiens mannosidase, alpha, class 1B, member 1 (MAN1B1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10409699] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10409699] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10521544] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 10521544] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [pmid 10409699] [evidence TAS]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [pmid 10521544] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10521544] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MANA-ER	MANA-ER
Homo sapiens	RefSeq	NM_000245.2	ILMN_12011	MET	NM_000245.2	NM_000245.2		4233	42741654	NM_000245.2	MET	NP_000236.2	ILMN_1715175	0004200504	S	6321	GTCTCTACCAGGGTCAAGAGCATGAACGCATCAATAGAAAGAACTCGGGG	7	+	116225375-116225424	7q31.2b	Homo sapiens met proto-oncogene (hepatocyte growth factor receptor) (MET), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1846706] [evidence TAS]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [pmid 15314156] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 2819873] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10871856] [evidence TAS]; Behavior in a fully developed and mature organism [goid 30534] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]; The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands [goid 48012] [evidence IEA]; The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51450] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with hepatocye growth factor to initiate a change in cell activity [goid 5008] [evidence IEA]; Combining with hepatocye growth factor to initiate a change in cell activity [goid 5008] [pmid 10871856] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11571281] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	RCCP2; HGFR; AUTS9	RCCP2; HGFR; AUTS9
Homo sapiens	RefSeq	XR_016734.2	ILMN_183086	LOC390578	XR_016734.2	XR_016734.2		390578	169208051	XR_016734.2	LOC390578		ILMN_3287309	0000450010	M	3965	GGAAACTTCCTTCTTGCTTCCTGAAGGTTGTCCGCGATGTTGCCAGTGTC	15	-	38392113-38392162	15q15.1a	PREDICTED: Homo sapiens misc_RNA (LOC390578), miscRNA.					
Homo sapiens	RefSeq	NM_003447.2	ILMN_177343	ZNF165	NM_003447.2	NM_003447.2		7718	30181234	NM_003447.2	ZNF165	NP_003438.1	ILMN_1806502	0006200014	S	2447	CCCTATGAATGCAGTGAGTGTGGAAGAGCCTTCAGTCAGAGCTCAAACCT	6	+	28057153-28057202	6p22.1b	Homo sapiens zinc finger protein 165 (ZNF165), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZSCAN7; LD65	ZSCAN7; LD65
Homo sapiens	RefSeq	NM_000645.2	ILMN_1173	AGL	NM_000645.2	NM_000645.2		178	116734848	NM_000645.2	AGL	NP_000636.2	ILMN_2371825	0002940113	A	7100	GTCTTGAACTACTGTGTCTAGTGGGCAAATGTCATTGTTACCTCTGTGTG	1	+	100162085-100162134	1p21.2a	Homo sapiens amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (AGL), transcript variant 5, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9691087] [evidence EXP]; A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages [goid 43033] [pmid 1374391] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [pmid 9691087] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GDE	GDE
Homo sapiens	RefSeq	NM_000645.2	ILMN_1173	AGL	NM_000645.2	NM_000645.2		178	116734848	NM_000645.2	AGL	NP_000636.2	ILMN_2274377	0005270041	I	40	GGAATGCGTTTCCAGGGGAAGGAGAAAGAGACATTACAGAGCAGACAGCT	1	+	100099393-100099442	1p21.2a	Homo sapiens amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (AGL), transcript variant 5, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9691087] [evidence EXP]; A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages [goid 43033] [pmid 1374391] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [pmid 9691087] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GDE	GDE
Homo sapiens	RefSeq	NM_152675.1	ILMN_1364	FLJ23754	NM_152675.1	NM_152675.1		201252	23097324	NM_152675.1	FLJ23754	NP_689888.1	ILMN_1716546	0002600670	S	1883	ATTCAGTGGAGACTCAGGAGGAGCCACACCGTGGGAACAGGGCTGATGCT	17	-	77663496-77663545		Homo sapiens hypothetical protein FLJ23754 (FLJ23754), mRNA.					
Homo sapiens	RefSeq	NM_001031834.1	ILMN_24932	RAB40AL	NM_001031834.1	NM_001031834.1		282808	73611939	NM_001031834.1	RAB40AL	NP_001027004.1	ILMN_2059423	0004050379	S	787	CCACTCACAAAAGGAGCAGCCTCTGCAAAGTGAAGATCGTCTGCCCACCC	X	+	102079642-102079691	Xq22.1e	Homo sapiens RAB40A, member RAS oncogene family-like (RAB40AL), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAR2; MGC119959; MGC119961; MGC119960; MGC119958	RAR2; MGC119959; MGC119961; MGC119960; MGC119958
Homo sapiens	RefSeq	NM_133503.2	ILMN_27825	DCN	NM_133503.2	NM_133503.2		1634	47419926	NM_133503.2	DCN	NP_598010.1	ILMN_1768227	0005550719	I	115	GCTTTGGGAGCAGAGAAGAGGGAGAAAGCAGCATCTTGCCTGGATGAGCC	12	-	91573195-91573244	12q21.33c	Homo sapiens decorin (DCN), transcript variant A2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 7961765] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PGII; DSPG2; CSCD; PGS2; SLRR1B; PG40	PGII; DSPG2; CSCD; PGS2; SLRR1B; PG40
Homo sapiens	RefSeq	NM_005557.2	ILMN_23524	KRT16	NM_005557.2	NM_005557.2		3868	24430191	NM_005557.2	KRT16	NP_005548.2	ILMN_1736760	0000450551	S	1028	AAAGAAGTGGCCTCCAACAGCGAACTGGTACAGAGCAGCCGCAGTGAGGT	17	-	37020692-37020741	17q21.2b	Homo sapiens keratin 16 (focal non-epidermolytic palmoplantar keratoderma) (KRT16), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 2451124] [evidence NAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 2451124] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8595410] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 7539673] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 2451124] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15731013] [evidence IPI]	K16; KRT16A; CK16; NEPPK; K1CP	K16; KRT16A; CK16; NEPPK; K1CP
Homo sapiens	RefSeq	NM_005557.2	ILMN_23524	KRT16	NM_005557.2	NM_005557.2		3868	24430191	NM_005557.2	KRT16	NP_005548.2	ILMN_2228162	0004540246	S	1272	AGGAGTACCAGATCTTGCTGGATGTGAAGACGCGGCTGGAGCAGGAGATT	17	-	37020146-37020195	17q21.2b	Homo sapiens keratin 16 (focal non-epidermolytic palmoplantar keratoderma) (KRT16), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 2451124] [evidence NAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 2451124] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8595410] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 7539673] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 2451124] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15731013] [evidence IPI]	K16; KRT16A; CK16; NEPPK; K1CP	K16; KRT16A; CK16; NEPPK; K1CP
Homo sapiens	RefSeq	NM_015631.2	ILMN_7866	C10ORF61	NM_015631.2	NM_015631.2		26123	62079293	NM_015631.2	C10orf61	NP_056446.1	ILMN_1795563	0004390494	I	614	CCTGGGAGAGTTTGGGGATCTTCATCCCACTCACTCTGTGTCGTACTTTC	10	-	97443227-97443276	10q23.33d	Homo sapiens chromosome 10 open reading frame 61 (C10orf61), transcript variant 2, mRNA.				DKFZp564D116; TECT3	DKFZp564D116; TECT3
Homo sapiens	RefSeq	NM_004067.1	ILMN_16218	CHN2	NM_004067.2	NM_004067.2		1124	91106934	NM_004067.2	CHN2	NP_004058.1	ILMN_1774110	0000830687	S	2338	CCCTGTGTACCTTGTCCCTCATTTTGCTGTGACACCCTGAAAAAGCTGAC	7	+	29506156-29506181:29510885-29510908	7p15.1c	Homo sapiens chimerin (chimaerin) 2 (CHN2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8175705] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 7614486] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BCH; ARHGAP3; RHOGAP3; MGC138360	ARHGAP3; RHOGAP3
Homo sapiens	RefSeq	NM_004067.2	ILMN_16218	CHN2	NM_004067.2	NM_004067.2		1124	91106934	NM_004067.2	CHN2	NP_004058.1	ILMN_2292187	0006580470	I	653	TCTTGGAGGCGTGGAGGGTGCCTACATCCTTAGAGAAAGCCAGCGGCAAC	7	+	29234287-29234336	7p15.1c	Homo sapiens chimerin (chimaerin) 2 (CHN2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8175705] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 7614486] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BCH; ARHGAP3; RHOGAP3; MGC138360	ARHGAP3; RHOGAP3
Homo sapiens	RefSeq	NM_004067.2	ILMN_16218	CHN2	NM_004067.2	NM_004067.2		1124	91106934	NM_004067.2	CHN2	NP_004058.1	ILMN_2403237	0003190246	A	3229	CCATTGGCACAGGGAGGTTTGACCTCTTCCCTGCTATTATCCCTCCTCCC	7	+	29519248-29519297	7p15.1c	Homo sapiens chimerin (chimaerin) 2 (CHN2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8175705] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 7614486] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BCH; ARHGAP3; RHOGAP3; MGC138360	ARHGAP3; RHOGAP3
Homo sapiens	RefSeq	NM_002038.2	ILMN_13978	IFI6	NM_022873.2	NM_022873.2		2537	94538330	NM_022873.2	IFI6	NP_075011.1	ILMN_1687384	0005090215	A	767	TGCGCCGACGATGCCCAGAATCCAGAACTTTGTCTATCACTCTCCCCAAC	1	-	27992615-27992664	1p35.3b	Homo sapiens interferon, alpha-inducible protein 6 (IFI6), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15685448] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [pmid 15685448] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 15685448] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 3017706] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 15685448] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51902] [pmid 15685448] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15685448] [evidence IPI]	IFI-6-16; 6-16; IFI616; G1P3; FAM14C	6-16; IFI616
Homo sapiens	RefSeq	NM_004212.1	ILMN_22836	SLC28A2	NM_004212.1	NM_004212.1		9153	4759131	NM_004212.1	SLC28A2	NP_004203.1	ILMN_1801886	0006200114	S	1959	CCCTGGGAAGATAAGGAGTTCAGTGCTATGGCCCTTACTAACTGCTGTGG	15	+	43354926-43354975	15q21.1a	Homo sapiens solute carrier family 28 (sodium-coupled nucleoside transporter), member 2 (SLC28A2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9435697] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9435697] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 9435697] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, into, out of, within or between cells [goid 15860] [pmid 9435697] [evidence TAS]	Interacting selectively with a nucleoside, a compound consisting of a purine or pyrimidine nitrogenous base linked either to ribose or deoxyribose [goid 1882] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nucleoside(out) + Na+(out) = nucleoside(in) + Na+(in) [goid 5415] [evidence IEA]; Catalysis of the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other [goid 15211] [pmid 9435697] [evidence TAS]	HsT17153; HCNT2; CNT2; SPNT1	HsT17153; HCNT2; CNT2; SPNT1
Homo sapiens	RefSeq	XM_942130.1	ILMN_181258	KCMF1	NM_020122.4	NM_020122.4		56888	150456454	NM_020122.4	KCMF1	NP_064507.3	ILMN_1711958	0004610563	I	4261	TTAGGCTCAGGTAAAGTAAGAGAAAACTTCTCTCCCTGTGGCCCCCAGAG	2	+	85136814-85136863	2p11.2g	Homo sapiens potassium channel modulatory factor 1 (KCMF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZZZ1; PCMF; DKFZP434L1021; DEBT91; FIGC	
Homo sapiens	RefSeq	Hs.469152	ILMN_181258	KCMF1	NM_020122.4	NM_020122.4		56888	150456454	NM_020122.4	KCMF1	NP_064507.3	ILMN_1839052	0004670168	S	7189	CTAGGGGGTAAGAATCCATGAACTCTCCTTCAGTCCCTAGCGACAGTGGC	2	+	85139742-85139791	2p11.2g	Homo sapiens potassium channel modulatory factor 1 (KCMF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZZZ1; PCMF; DKFZP434L1021; DEBT91; FIGC	
Homo sapiens	Unigene	Hs.524129	ILMN_100426	HS.524129	Hs.524129		Hs.524129		34528567	AK123101			ILMN_1841970	0004880538	S	1754	ACGTGAGCTGCAACCAGCCACCGCGCTCTCTCCAGGCTTGTTTACCAGTT	10	+	7495322-7495371		Homo sapiens cDNA FLJ41106 fis, clone BLADE2007722					
Homo sapiens	RefSeq	XM_298151.5	ILMN_37510	LOC344595	XM_298151.5	XM_298151.5		344595	88965559	XM_298151.5	LOC344595	XP_298151.5	ILMN_1696701	0002750593	A	3541	TGGTTCTCAGACCTTCGGACAGCAGACTTGGGGCCTTCTCGGCCTCCATT	3	+	108450314-108450363	3q13.12a	PREDICTED: Homo sapiens hypothetical LOC344595 (LOC344595), mRNA.					
Homo sapiens	RefSeq	NM_022049.1	ILMN_21206	GPR88	NM_022049.2	NM_022049.2		54112	116063555	NM_022049.2	GPR88	NP_071332.2	ILMN_1812946	0001660184	S	3225	CCAGCTTGCTTTGTTGCACGCCTGGGCAATTTCAGCCAGGACATTAGGAC	1	+	100779931-100779980	1p21.2a	Homo sapiens G protein-coupled receptor 88 (GPR88), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 11056049] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	STRG	STRG
Homo sapiens	Unigene	Hs.576963	ILMN_129144	HS.576963	Hs.576963		Hs.576963		83105709	DB336446			ILMN_1822775	0001990215	S	387	CCTCTCACATCCAGAGGGAGGTTGAAGTTAGGCCAGGCAGAGGCGTGCTA	11	-	118070608-118070657		DB336446 TESTI2 Homo sapiens cDNA clone TESTI2006885 3, mRNA sequence					
Homo sapiens	RefSeq	XM_930148.1	ILMN_33377	LOC647130	XM_930148.1	XM_930148.1		647130	88965948	XM_930148.1	LOC647130	XP_935241.1	ILMN_1743592	0006840259	S	1	ATGTTTCTGAAAAGAGTGAAACTTCCTCAAGAAGAGCCTCAGGTAGGTCC	3	-	166323526-166323575		PREDICTED: Homo sapiens hypothetical protein LOC647130 (LOC647130), mRNA.					
Homo sapiens	RefSeq	XM_001722391.1	ILMN_352405	LOC100129865	XM_001722391.1	XM_001722391.1		100129865	169167005	XM_001722391.1	LOC100129865	XP_001722443.1	ILMN_3273198	0005220092	M	384	GAATATATAACTCCTATCCTCACAGAGTTAGTCCATAAGGCCTCAGTGAC				4q21.1a	PREDICTED: Homo sapiens similar to PRO1405 (LOC100129865), mRNA.					
Homo sapiens	Unigene	Hs.551024	ILMN_110443	HS.551024	Hs.551024		Hs.551024		20360156	BQ184605			ILMN_1887170	0006330762	S	508	CCAGCTTCCATTGCTGTCAGGACACAGGTAATGTCAACCCAGTTCCCTAG	3	-	166551757-166551806		UI-E-EJ1-ajr-f-07-0-UI.s1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajr-f-07-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001714734.1	ILMN_347872	LOC100133432	XM_001714734.1	XM_001714734.1		100133432	169203272	XM_001714734.1	LOC100133432	XP_001714786.1	ILMN_3245919	0003930669	S	4512	CGTCACCCGGTCAGAGACTCCAAATAAACCGGTTCTTGTCAAGGCACAGA					PREDICTED: Homo sapiens similar to Mucin-6 precursor (Gastric mucin-6) (LOC100133432), mRNA.					
Homo sapiens	RefSeq	NM_001077664.1	ILMN_177599	URG4	NM_001077664.1	NM_001077664.1		55665	117968344	NM_001077664.1	URG4	NP_001071132.1	ILMN_2386818	0003610647	A	3620	GTGCCCCACAGCACTTTGTTATACCTCTGCCACACACTTCACGCAGCGCG	7	-	43915910-43915959	7p13e	Homo sapiens up-regulated gene 4 (URG4), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	DKFZp666G166; DKFZp686O0457	DKFZp666G166; DKFZp686O0457
Homo sapiens	RefSeq	NM_021798.2	ILMN_29101	IL21R	NM_021798.2	NM_021798.2		50615	31083186	NM_021798.2	IL21R	NP_068570.1	ILMN_1722209	0007330242	I	12	TCAGATAGAGGAGCTCTTTGGGAAGAGACGCCGGGCAGGCAGAAGCAGCA	16	+	27346091-27346140	16p12.1a	Homo sapiens interleukin 21 receptor (IL21R), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11081504] [evidence NAS]	The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [pmid 11081504] [evidence NAS]	Combining with interleukin-21 to initiate a change in cell activity [goid 1532] [pmid 11081504] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NILR; MGC10967	NILR; MGC10967
Homo sapiens	RefSeq	NM_020135.2	ILMN_30297	WRNIP1	NM_020135.2	NM_020135.2		56897	18426901	NM_020135.2	WRNIP1	NP_064520.2	ILMN_1703036	0004200474	I	1214	CCTTCCTCACGTGGAATGTGGGACGATCACTCTGATTGGGGCAACCACTG	6	+	2715361-2715410	6p25.2b	Homo sapiens Werner helicase interacting protein 1 (WRNIP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 15670210] [evidence IDA]; Any process that modulates the frequency, rate or extent of initiation of DNA replication; the process by which DNA becomes competent to replicate. In eukaryotes, replication competence is established in early G1 and lost during the ensuing S phase [goid 30174] [pmid 15670210] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15670210] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 15670210] [evidence IC ]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 15670210] [evidence IMP]	FLJ22526; bA420G6.2; RP11-420G6.2; WHIP	FLJ22526; bA420G6.2; RP11-420G6.2; WHIP
Homo sapiens	RefSeq	NM_015534.3	ILMN_14976	ZZZ3	NM_015534.4	NM_015534.4		26009	141803158	NM_015534.4	ZZZ3	NP_056349.1	ILMN_1653618	0001300441	S	3790	GGAGGCAACTGTGGCATTGCTTCCTTAACCAGCTCATGGTGTGTGAATGT	1	-	78030673-78030722	1p31.1e	Homo sapiens zinc finger, ZZ-type containing 3 (ZZZ3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP564I052; FLJ10362; DKFZp313N0119	DKFZP564I052; FLJ10362; DKFZp313N0119
Homo sapiens	RefSeq	XM_001726588.1	ILMN_341968	LOC100128746	XM_001726588.1	XM_001726588.1		100128746	169162720	XM_001726588.1	LOC100128746	XP_001726640.1	ILMN_3184595	0005390044	A	1	AAAGAGAAGAACCTTCACAAGGGAATGGTCATAATTCCGCCTCGCTGTCA	1	+	180814832-180814835:180821603-180821622:180821623-180821648	1q25.3c	PREDICTED: Homo sapiens hypothetical protein LOC100128746 (LOC100128746), mRNA.					
Homo sapiens	RefSeq	XM_001714326.1	ILMN_342794	LOC100128537	XM_001714326.1	XM_001714326.1		100128537	169161185	XM_001714326.1	LOC100128537	XP_001714378.1	ILMN_3262011	0005310484	M	408	GAGCCGGGAGATGGAGCTCTCAGCAGAGTGGCCAGGATGTTCTGTCAACA	1	-	206059047-206059096	1q32.2a	PREDICTED: Homo sapiens similar to chromosome 1 open reading frame 132 (LOC100128537), mRNA.					
Homo sapiens	RefSeq	XR_037518.1	ILMN_350683	LOC729141	XR_037518.1	XR_037518.1		729141	169164458	XR_037518.1	LOC729141		ILMN_3229067	0006250025	A	1336	GCACACAGTATCTTAGCACCAGGCAGACACAGTCATGGAACTGCTGTGAG				2q32.1f	PREDICTED: Homo sapiens misc_RNA (LOC729141), miscRNA.					
Homo sapiens	RefSeq	NM_017440.2	ILMN_12153	MDM1	NM_017440.2	NM_017440.2		56890	34222109	NM_017440.2	MDM1	NP_059136.1	ILMN_1736460	0004730546	I	1384	GCTCCCACCATACCCGTTAGAAGGCGGCTGGCTTGGGATACAGAGAACAC	12	-	66995147-66995196	12q15b	Homo sapiens Mdm4, transformed 3T3 cell double minute 1, p53 binding protein (mouse) (MDM1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	RefSeq	NM_004701.2	ILMN_15254	CCNB2	NM_004701.2	NM_004701.2		9133	10938017	NM_004701.2	CCNB2	NP_004692.1	ILMN_1801939	0005360070	S	1276	CAGCATGATCCCTCAGCTGAACTCAAAAGCCGTCAAAGACCTTGCCTCCC	15	+	57204299-57204348	15q22.2a	Homo sapiens cyclin B2 (CCNB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1717476] [evidence EXP]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [pmid 11256614] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]	HsT17299	HsT17299
Homo sapiens	RefSeq	XM_931740.1	ILMN_33010	LOC653293	XM_931740.1	XM_931740.1		653293	89061266	XM_931740.1	LOC653293	XP_936833.1	ILMN_1750879	0006510612	I	1364	TGAATGTGCGTCCTGGTCATCCTTGCCCCAAACCACAAAGGACTGTTTAG	Y	+	9298301-9298350		PREDICTED: Homo sapiens similar to testis specific protein, Y-linked 1, transcript variant 2 (LOC653293), mRNA.					
Homo sapiens	RefSeq	NM_001024226.1	ILMN_10712	ARF1	NM_001024226.1	NM_001024226.1		375	66879659	NM_001024226.1	ARF1	NP_001019397.1	ILMN_1661458	0005550491	I	129	GGTGTGGGCCGCAGAGACGTTGGAGCCGGCGGGGGCTGGGGACTGGCCTC	1	+	226337112-226337161	1q42.13c	Homo sapiens ADP-ribosylation factor 1 (ARF1), transcript variant 3, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 8599108] [evidence EXP]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 8533093] [evidence EXP]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 10402461] [evidence EXP]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15202998] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8529647] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IEA]	The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11031247] [evidence EXP]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat [goid 48205] [pmid 16956762] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 1577740] [evidence TAS];  [goid 5057] [pmid 8529647] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14690595] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14654833] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_030786.2	ILMN_25683	SYNC	NM_030786.2	NM_030786.2		81493	166706886	NM_030786.2	SYNC	NP_110413.2	ILMN_3239031	0004180735	S	1276	GGAGGACCAGATCGCACTTGTGAGGCAAAAACGAGATGAAGAGGTGCAGC	1	-	33160473-33160522	1p35.1b	Homo sapiens syncoilin, intermediate filament protein (SYNC), transcript variant 1, mRNA.				SYNC; MGC149626; SYNCOILIN; MGC149625	SYNC; MGC149626; SYNCOILIN; MGC149625
Homo sapiens	RefSeq	NM_007267.5	ILMN_19035	TMC6	NM_007267.5	NM_007267.5		11322	34222212	NM_007267.5	TMC6	NP_009198.3	ILMN_1794677	0004290209	S	2623	GACCCTGCTGGGACACCAGGACAAGGAAGACAGTTTCGCCTCTCGAAAGC	17	-	73620710-73620759	17q25.3a-q25.3b	Homo sapiens transmembrane channel-like 6 (TMC6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			LAK-4P; EVIN1; EV1; EVER1	LAK-4P; EVIN1; EV1; EVER1
Homo sapiens	RefSeq	NM_003111.3	ILMN_15345	SP3	NM_003111.3	NM_003111.3		6670	67078401	NM_003111.3	SP3	NP_003102.1	ILMN_1662168	0004890465	I	170	CGCTCCCGAAAAGCCCGTGAAACAAGAGGAAATGGCTGCCTTGGACGTGG	2	-	174829233-174829281:174829893-174829893	2q31.1f	Homo sapiens Sp3 transcription factor (SP3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12560508] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 12560508] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [evidence IEA]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16696853] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9278495] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 9278495] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686O1631; SPR-2	DKFZp686O1631; SPR-2
Homo sapiens	RefSeq	NR_000034.1	ILMN_3887	TMEM185B	NR_000034.1	NR_000034.1		79134	22546036	NR_000034.1	TMEM185B		ILMN_2231021	0006960544	S	1501	CCAGGCACACACAGACTCCACTTGGCCTTCGCCTCTTGTTCATTCATCCC	2	-	120979434-120979483	2q14.2c	Homo sapiens transmembrane protein 185B (pseudogene) (TMEM185B), non-coding RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ20979; FAM11B	FAM11B; FLJ20979
Homo sapiens	RefSeq	NR_000034.1	ILMN_3887	TMEM185B	NR_000034.1	NR_000034.1		79134	22546036	NR_000034.1	TMEM185B		ILMN_2231020	0003850722	S	1673	GGGTAAGAGACTTGCTTTCCAGGTTCGCACTTTCAGGTGTAGCTGGGGGC	2	-	120979262-120979311	2q14.2c	Homo sapiens transmembrane protein 185B (pseudogene) (TMEM185B), non-coding RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ20979; FAM11B	FAM11B; FLJ20979
Homo sapiens	RefSeq	XM_940242.1	ILMN_36510	LOC651112	XM_940242.1	XM_940242.1		651112	89066502	XM_940242.1	LOC651112	XP_945335.1	ILMN_1705534	0005570528	S	885	GCTGAGGTGGCAGAGGTAGGATCAGGGCCAAGGGGATGGCTGGCATACAT					PREDICTED: Homo sapiens similar to Baculoviral IAP repeat-containing protein 1 (Neuronal apoptosis inhibitory protein) (LOC651112), mRNA.					
Homo sapiens	RefSeq	NM_001004485.1	ILMN_9154	OR13F1	NM_001004485.1	NM_001004485.1		138805	52218857	NM_001004485.1	OR13F1	NP_001004485.1	ILMN_1682330	0003870379	S	561	GGTTTGTGTGGACACCTCCCTGGTGCAGTTAATCATGCTGGTGATCAGTG	9	+	106306925-106306974	9q31.1d	Homo sapiens olfactory receptor, family 13, subfamily F, member 1 (OR13F1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR9-6	OR9-6
Homo sapiens	Unigene	Hs.568810	ILMN_120991	HS.568810	Hs.568810		Hs.568810		3678855	AI150386			ILMN_1821769	0006560037	S	95	AGACTCCATCACAGTTCCAGATGGGTAGGAATACCTTGCAGGGCTGGGGC	10	+	26213020-26213069		qf40g04.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1752534 3 similar to TR:O02711 O02711 PRO-POL-DUTPASE POLYPROTEIN ;, mRNA sequence					
Homo sapiens	RefSeq	NM_000028.1	ILMN_164290	AGL	NM_000028.2	NM_000028.2		178	116734846	NM_000028.2	AGL	NP_000019.2	ILMN_1717468	0003190468	I	132	TAAGCAGAAGTGCCATTCGGAGTCTCCAGAGCCCTGTGGCTTGGGGCTGG	1	+	100088764-100088813	1p21.2a	Homo sapiens amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (AGL), transcript variant 4, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9691087] [evidence EXP]; A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages [goid 43033] [pmid 1374391] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [pmid 9691087] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GDE	GDE
Homo sapiens	RefSeq	NM_006231.2	ILMN_18431	POLE	NM_006231.2	NM_006231.2		5426	62198236	NM_006231.2	POLE	NP_006222.2	ILMN_1728199	0002000010	S	7529	GCCTCAGGAAAACAAGACCTCTGTGCACCTCACTTTTGGCTCACTGCAGC	12	-	133200609-133200658	12q24.33d	Homo sapiens polymerase (DNA directed), epsilon (POLE), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16762037] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 6693436] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 16762037] [evidence IMP]; Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 1730053] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 16762037] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 16762037] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 16762037] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434F222; FLJ21434; POLE1	DKFZp434F222; FLJ21434; POLE1
Homo sapiens	RefSeq	NM_015343.3	ILMN_28688	DULLARD	NM_015343.3	NM_015343.3		23399	34222318	NM_015343.3	DULLARD	NP_056158.2	ILMN_2133638	0003290672	S	1326	TCCACTTGGAGTCTGGATGGACACATGGGCCAGGGGCTCTGAAGCAGCCT	17	-	7088034-7088083	17p13.1d	Homo sapiens dullard homolog (Xenopus laevis) (DULLARD), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 17420445] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear membrane [goid 6998] [pmid 17420445] [evidence IMP]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 17420445] [evidence IMP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	NET56; HSA011916	NET56; HSA011916
Homo sapiens	RefSeq	NM_080829.2	ILMN_13660	FAM65C	NM_080829.2	NM_080829.2		140876	109689704	NM_080829.2	FAM65C	NP_543019.2	ILMN_3242330	0006270471	S	3861	TGAGCAGCACAGGCAGTAGGGCCACTCACTTTGGCCATCCGCACCCAAAT	20	-	49203017-49203066	20q13.13f	Homo sapiens family with sequence similarity 65, member C (FAM65C), mRNA.				FLJ32230; dJ530I15.2; FLJ00360; FAM65C	FLJ32230; dJ530I15.2; FAM65C
Homo sapiens	RefSeq	NM_001025248.1	ILMN_163345	DUT	NM_001025248.1	NM_001025248.1		1854	70906440	NM_001025248.1	DUT	NP_001020419.1	ILMN_1721008	0002850239	I	91	AAATGACTCCCCTCTGCCCTCGCCCCGCGCTCTGCTACCATTTCCTTACG	15	+	46411003-46411004:46411005-46411052	15q21.1d	Homo sapiens deoxyuridine triphosphatase (DUT), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8631816] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8631816] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8631816] [evidence EXP]	The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate [goid 46080] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 1325640] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 1325640] [evidence TAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate [goid 46080] [evidence IEA]	Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate [goid 4170] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate [goid 4170] [pmid 8631816] [evidence EXP]; Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate [goid 4170] [pmid 8631816] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	dUTPase; FLJ20622	dUTPase; FLJ20622
Homo sapiens	RefSeq	NM_001025248.1	ILMN_163345	DUT	NM_001025248.1	NM_001025248.1		1854	70906440	NM_001025248.1	DUT	NP_001020419.1	ILMN_1732688	0006280242	A	2045	GAAATCAACTCAGTGGGACATAGCCAGCATTTTTGCATACCAGGTTGGGC	15	+	46422761-46422810	15q21.1d	Homo sapiens deoxyuridine triphosphatase (DUT), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8631816] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8631816] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8631816] [evidence EXP]	The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate [goid 46080] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 1325640] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 1325640] [evidence TAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate [goid 46080] [evidence IEA]	Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate [goid 4170] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate [goid 4170] [pmid 8631816] [evidence EXP]; Catalysis of the reaction: dUTP + H2O = dUMP + diphosphate [goid 4170] [pmid 8631816] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	dUTPase; FLJ20622	dUTPase; FLJ20622
Homo sapiens	RefSeq	NM_000595.2	ILMN_16326	LTA	NM_000595.2	NM_000595.2		4049	6806892	NM_000595.2	LTA	NP_000586.2	ILMN_1795464	0001030743	S	1328	AGAGCCCCACACGGAGGCATCTGCACCCTCGATGAAGCCCAATAAACCTC	6	+	31531985-31532034	6p21.33a	Homo sapiens lymphotoxin alpha (TNF superfamily, member 1) (LTA), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 6334807] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 6334807] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 6334807] [evidence TAS]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	LT; TNFSF1; TNFB	LT; TNFSF1; TNFB
Homo sapiens	RefSeq	NM_024860.1	ILMN_26991	SETD6	NM_024860.1	NM_024860.1		79918	13376287	NM_024860.1	SETD6	NP_079136.1	ILMN_1724009	0005810437	S	1782	CTCGATAGTTACCCAAAGTTCAGTCTAGATGGCACAAACCACCTCTCAGG	16	+	57110851-57110900	16q21a	Homo sapiens SET domain containing 6 (SETD6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FLJ21148	FLJ21148
Homo sapiens	RefSeq	NM_020753.2	ILMN_18355	CASKIN2	NM_020753.2	NM_020753.2		57513	45433546	NM_020753.2	CASKIN2	NP_065804.1	ILMN_1768556	0000830437	S	4808	TCTATCAACTGCCTGAGAGGACACAATGGGGGAGGGGCTTCGGACCACAG	17	-	71008057-71008106	17q25.1c	Homo sapiens CASK interacting protein 2 (CASKIN2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12040031] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ANKS5B; FLJ21609; KIAA1139	FLJ21609; KIAA1139; ANKS5B
Homo sapiens	RefSeq	NR_015391.1	ILMN_371599	LOC285194	NR_015391.1	NR_015391.1		285194	213417754	NR_015391.1	LOC285194		ILMN_3246484	0006110504	S	1839	GGCCAAACCCTCAATGAATGCCAGTGTTCGCCTTATGTTCTTCTTGCCGG	3	+	116435624-116435673	3q13.31c	Homo sapiens hypothetical LOC285194 (LOC285194), non-coding RNA.					
Homo sapiens	RefSeq	NM_181462.1	ILMN_29939	MRPL55	NM_181462.1	NM_181462.1		128308	31563359	NM_181462.1	MRPL55	NP_852127.1	ILMN_1799289	0001850670	I	309	TGGCAGCCTCTTCCTGGCTAGGGGGCCAGAACGCCTCTGACCACAGCCTG	1	-	226362356-226362405	1q42.13c	Homo sapiens mitochondrial ribosomal protein L55 (MRPL55), nuclear gene encoding mitochondrial protein, transcript variant 4, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	DKFZp686D1387; MGC61802; PRO19675; AAVG5835	DKFZp686D1387; PRO19675; MGC61802; AAVG5835
Homo sapiens	RefSeq	NM_001229.2	ILMN_2999	CASP9	NM_032996.1	NM_032996.1		842	14790127	NM_032996.1	CASP9	NP_127463.1	ILMN_1718070	0004280735	A	1222	GGCCAGGTCACCCTTTGCTGTGAGGCTGTCCTGTACATTGTGGGATGTTC	1	-	15819062-15819111	1p36.21a	Homo sapiens caspase 9, apoptosis-related cysteine peptidase (CASP9), transcript variant beta, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9922454] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9390557] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9812896] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [pmid 8663294] [evidence TAS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [pmid 9390557] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 9390557] [evidence TAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 8663294] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11069302] [evidence IPI]; Increases the activity of an enzyme [goid 8047] [pmid 9390557] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 8900201] [evidence TAS]	ICE-LAP6; MCH6; APAF3; CASPASE-9c; APAF-3	ICE-LAP6; APAF3; MCH6; CASPASE-9c; APAF-3
Homo sapiens	RefSeq	NM_003826.1	ILMN_9295	NAPG	NM_003826.1	NM_003826.1		8774	4505330	NM_003826.1	NAPG	NP_003817.1	ILMN_1788268	0001430114	S	859	GGACAATGATTATGCTAAGCTGGGCCTGAGTTTGGTGGTTCCAGGAGGGG	18	+	10539088-10539093:10540074-10540117	18p11.22a	Homo sapiens N-ethylmaleimide-sensitive factor attachment protein, gamma (NAPG), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11278501] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11278501] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 11278501] [evidence NAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 8455721] [evidence TAS]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 8455721] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 11278501] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11278501] [evidence IPI]	GAMMASNAP	GAMMASNAP
Homo sapiens	RefSeq	NR_029694.1	ILMN_387877	MIR125B2	NR_029694.1	NR_029694.1		406912	262205364	NR_029694.1	MIR125B2		ILMN_3308743	0005820192	S	37	AGGTATTTTAGTAACATCACAAGTCAGGCTCTTGGGACCTAGGCGGAGGG				21q21.1b	Homo sapiens microRNA 125b-2 (MIR125B2), microRNA.					
Homo sapiens	RefSeq	XR_039545.1	ILMN_352728	LOC100130092	XR_039545.1	XR_039545.1		100130092	169172995	XR_039545.1	LOC100130092		ILMN_3273493	0004760309	M	1049	GGGCTCACCATGCAGATGCGGGTCACACTGAGTGCTGGAGAAGGTGTTAT	8	-	136706308-136706357	8q24.23a	PREDICTED: Homo sapiens misc_RNA (LOC100130092), miscRNA.					
Homo sapiens	RefSeq	XM_938599.1	ILMN_31681	LOC441377	XM_938599.2	XM_938599.2		441377	113420506	XM_938599.2	LOC441377	XP_943692.1	ILMN_1677697	0000830484	S	212	AGCTTCCCAAGCTGTATGTGAAGCTACCTTACTGTGTGAGTTGTGCAATT				8q24.12a	PREDICTED: Homo sapiens similar to 40S ribosomal protein S26 (LOC441377), mRNA.					
Homo sapiens	RefSeq	NM_032285.2	ILMN_3158	MRI1	NM_032285.2	NM_032285.2		84245	85861244	NM_032285.2	MRI1	NP_115661.1	ILMN_2410965	0000160736	A	2720	AGAGGCTAGAACCCCGCACTTGTGCCTTGAGCTTACTGACCTCAACACCC	19	+	13745780-13745829	19p13.13a	Homo sapiens methylthioribose-1-phosphate isomerase homolog (S. cerevisiae) (MRI1), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_032285.2	ILMN_3158	MRI1	NM_032285.2	NM_032285.2		84245	85861244	NM_032285.2	MRI1	NP_115661.1	ILMN_2296284	0004230152	I	449	AGCTATGCGAGCATTGGGAAGAGCATACCAGGCAGAGGGAACTGCCACTG	19	+	13740184-13740233	19p13.13a	Homo sapiens methylthioribose-1-phosphate isomerase homolog (S. cerevisiae) (MRI1), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NR_003187.1	ILMN_175406	NCF1C	NR_003187.1	NR_003187.1		654817	114796635	NR_003187.1	NCF1C		ILMN_2112988	0003180681	S	825	CAGGCTACTTTCCGTCCATGTACCTGCAAAAGTCGGGGCAAGACGTGTCC	7	-	74573712-74573761	7q11.23d	Homo sapiens neutrophil cytosolic factor 1C pseudogene (NCF1C), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SH3PXD1C	SH3PXD1C
Homo sapiens	RefSeq	XM_928236.1	ILMN_38270	LOC645201	XM_928236.1	XM_928236.1		645201	88943881	XM_928236.1	LOC645201	XP_933329.1	ILMN_1714696	0005490221	S	3	GTCCCTGCCCATCAGGATAAACTGCTGGGCATCCAGCTATGATGATGCCC	1	-	227892164-227892213	1q42.13e	PREDICTED: Homo sapiens hypothetical protein LOC645201 (LOC645201), mRNA.					
Homo sapiens	RefSeq	NM_013453.2	ILMN_9452	SPANXA1	NM_013453.2	NM_013453.2		30014	14192936	NM_013453.2	SPANXA1	NP_038481.2	ILMN_2233319	0004280092	S	205	AGGAACTTTAAAAGAACATCTCCAGAGGAACTGCTGAATGACCACGCCCG	X	-	140671935-140671984	Xq27.2a	Homo sapiens sperm protein associated with the nucleus, X-linked, family member A1 (SPANXA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10906052] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10906052] [evidence TAS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10906052] [evidence TAS]		SPAN-Xb; SPANX-C; SPANX; SPANXD; SPANXA2; NAP-X; SPANX-D; SPANXC; SPANX-A2; SPAN-Xa	SPAN-Xb; SPANX-C; SPANX; SPANXD; SPANXA2; NAP-X; SPANX-D; SPANXC; SPANX-A2; SPAN-Xa
Homo sapiens	RefSeq	NM_013453.2	ILMN_9452	SPANXA1	NM_013453.2	NM_013453.2		30014	14192936	NM_013453.2	SPANXA1	NP_038481.2	ILMN_2233314	0007550121	S	203	GGAGGAACTTTAAAAGAACATCTCCAGAGGAACTGCTGAATGACCACGCC	X	-	140671937-140671986	Xq27.2a	Homo sapiens sperm protein associated with the nucleus, X-linked, family member A1 (SPANXA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10906052] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10906052] [evidence TAS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10906052] [evidence TAS]		SPAN-Xb; SPANX-C; SPANX; SPANXD; SPANXA2; NAP-X; SPANX-D; SPANXC; SPANX-A2; SPAN-Xa	SPAN-Xb; SPANX-C; SPANX; SPANXD; SPANXA2; NAP-X; SPANX-D; SPANXC; SPANX-A2; SPAN-Xa
Homo sapiens	RefSeq	XM_001718538.1	ILMN_345480	LOC442434	XM_001718538.1	XM_001718538.1		442434	169181281	XM_001718538.1	LOC442434	XP_001718590.1	ILMN_3287809	0000540341	M	812	GGTTCAGGTGTATCTTGGAGCAGTTCACAGCCAAGTTCAGGTGCAAGGCC	9	+	120566237-120566286	9q33.1c	PREDICTED: Homo sapiens similar to hCG1784562 (LOC442434), mRNA.					
Homo sapiens	RefSeq	NM_005772.2	ILMN_183159	RCL1	NM_005772.2	NM_005772.2		10171	21361284	NM_005772.2	RCL1	NP_005763.2	ILMN_1813766	0005340142	S	1650	CCTGTGGAGTCTGTTACTGTTCTTTCTGCAAGGACTCACCTCCTTGAGCC	9	+	4850648-4850697	9p24.1c	Homo sapiens RNA terminal phosphate cyclase-like 1 (RCL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [pmid 10790377] [evidence NAS]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [evidence IEA]	RPCL1; RNAC	RPCL1; RNAC
Homo sapiens	RefSeq	XM_001725594.1	ILMN_335869	LOC100131180	XM_001725594.1	XM_001725594.1		100131180	169180120	XM_001725594.1	LOC100131180	XP_001725646.1	ILMN_3200203	0007160358	A	596	CCTTAGCGTCTCCTGTTATCCAAAGCGACCACAACCTACATGACAGCCCC	9	-	32945508-32945557	9p13.3e	PREDICTED: Homo sapiens hypothetical protein LOC100131180 (LOC100131180), mRNA.					
Homo sapiens	RefSeq	NM_032714.1	ILMN_6769	INF2	NM_032714.1	NM_032714.1		64423	14249315	NM_032714.1	INF2	NP_116103.1	ILMN_1729596	0002140360	S	1251	TGTTCGTCGCTACTTGGTGTCAGGCCCACTAGAACAAGGGTCCCCAACCG	14	+	104241753-104241802	14q32.33b	Homo sapiens inverted formin, FH2 and WH2 domain containing (INF2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	MGC13251	MGC13251
Homo sapiens	RefSeq	NM_019607.1	ILMN_26500	C8ORF44	NM_019607.1	NM_019607.1		56260	9624987	NM_019607.1	C8orf44	NP_062553.1	ILMN_1792242	0004220070	S	1477	CCTGAAAGGGAGCCTTCTACTTGCTGACGACTGCCTCATCTCTTCTGAGG	8	+	67592895-67592944	8q13.1b	Homo sapiens chromosome 8 open reading frame 44 (C8orf44), mRNA.				FLJ11267	FLJ11267
Homo sapiens	RefSeq	NM_032134.1	ILMN_8171	QRICH2	NM_032134.1	NM_032134.1		84074	14149792	NM_032134.1	QRICH2	NP_115510.1	ILMN_1695016	0007330368	S	5123	CTCGGCCACAGAGCGCCCAGATTTCGGCTGGCAACACCTCAGAAAGATAG	17	-	74270316-74270316:74270317-74270324:74271900-74271940	17q25.1d	Homo sapiens glutamine rich 2 (QRICH2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DKFZP434P0316	DKFZP434P0316
Homo sapiens	RefSeq	NR_002188.1	ILMN_15051	GBAP	NR_002188.1	NR_002188.1		2630	54633320	NR_002188.1	GBAP		ILMN_1741837	0003400576	S	3940	TGAAGACAGCGTTGGGGGCCTTGGCAGGATCACACTCTCAGCTTCTCCTC	1	-	153450899-153450948	1q22a	Homo sapiens glucosidase, beta; acid, pseudogene (GBAP) on chromosome 1.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine [goid 4348] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Homo sapiens	RefSeq	NM_030759.3	ILMN_27547	NRBF2	NM_030759.3	NM_030759.3		29982	156231354	NM_030759.3	NRBF2	NP_110386.2	ILMN_3237385	0005290592	S	1478	TGGTGGCCGGAGGGGCTGCCTTATATTTGAAACATGCTTTCTATCATGCA	10	+	64584374-64584423	10q21.2b	Homo sapiens nuclear receptor binding factor 2 (NRBF2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		COPR2; COPR1; NRBF-2; FLJ30395; DKFZp564C1664	FLJ30395; DKFZp564C1664; COPR2; COPR1; NRBF-2
Homo sapiens	RefSeq	XM_941855.1	ILMN_31412	LOC652418	XM_941855.1	XM_941855.1		652418	89071454	XM_941855.1	LOC652418	XP_946948.1	ILMN_1783471	0007570471	S	205	GAGCTGTACGATTTGAGATTAATGGGGGAGAAACCTTTTTGGTCTTGTGG					PREDICTED: Homo sapiens similar to hypothetical protein FLJ36492 (LOC652418), mRNA.					
Homo sapiens	RefSeq	NM_152614.1	ILMN_27238	C2ORF57	NM_152614.1	NM_152614.1		165100	22749256	NM_152614.1	C2orf57	NP_689827.1	ILMN_1768007	0001690671	S	1308	TGCTCCCTTGCCCATTCTTGCTCTGGACGGTTCCCCCAGCCCATGCAATA	2	+	232167163-232167212	2q37.1b	Homo sapiens chromosome 2 open reading frame 57 (C2orf57), mRNA.				MGC35154	MGC35154
Homo sapiens	RefSeq	NM_017667.2	ILMN_20804	CCDC132	NM_017667.2	NM_017667.2		55610	62865870	NM_017667.2	CCDC132	NP_060137.2	ILMN_1716342	0000460682	I	3352	GGGAAGTTTATGGAAAATGAAGTTGGCACTTTTCTACCCTCTGAGCTTGG	7	+	92826013-92826062	7q21.3a	Homo sapiens coiled-coil domain containing 132 (CCDC132), transcript variant 1, mRNA.				KIAA1861; FLJ20097; FLJ23581	KIAA1861; FLJ20097; FLJ23581
Homo sapiens	RefSeq	NM_016006.3	ILMN_10853	ABHD5	NM_016006.3	NM_016006.3		51099	33469972	NM_016006.3	ABHD5	NP_057090.2	ILMN_1655702	0005860215	S	1145	CGACACTGTGGACTGAACACACTGAAGCTCTGATGGGAAAACCTGGTGAC	3	+	43735013-43735028:43735029-43735062	3p21.33e	Homo sapiens abhydrolase domain containing 5 (ABHD5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A subcellular organelle of plant cells surrounded by 'half-unit' or a monolayer membrane instead of the more usual bilayer. A droplet of triacylglycerol surrounded by a monolayer of phospholipids, interacting with the triacylglycerols and the hydrophilic head groups facing the cytosol, and containing major protein components called oleosins [goid 12511] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC8731; CGI58; CDS; NCIE2; IECN2	CGI58; CDS; NCIE2; IECN2; MGC8731
Homo sapiens	RefSeq	NM_194331.1	ILMN_40416	RNF38	NM_022781.4	NM_022781.4		152006	89903026	NM_022781.4	RNF38	NP_073618.3	ILMN_1793616	0004070044	A	4761	GTCCCCCTGTTGGTACATTTGGTTACCTCATTTTGCCGTTTCAGATTGTG	9	-	36338131-36338180	9p13.2b	Homo sapiens ring finger protein 38 (RNF38), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ21343	FLJ21343
Homo sapiens	RefSeq	NM_194261.1	ILMN_27920	UBE2I	NM_194261.1	NM_194261.1		7329	35494002	NM_194261.1	UBE2I	NP_919237.1	ILMN_1725529	0002370068	I	41	CCCGGCCCCAGGACCTGACCCCAAGGAAACCTCCGGGACCTGTGGCTGGA	16	+	1299221-1299270	16p13.3e	Homo sapiens ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) (UBE2I), transcript variant 4, mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [pmid 8610150] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9885291] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8565643] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14516784] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12072434] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9885291] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12072434] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with Helix Loop Helix, a domain of 40-50 residues that occurs in specific DNA-binding proteins that act as transcription factors. The domain is formed of two amphipathic helices joined by a variable length linker region that can form a loop and it mediates protein dimerization [goid 43398] [evidence IEA]	UBC9; P18; C358B7.1	UBC9; P18; C358B7.1
Homo sapiens	RefSeq	NM_006867.2	ILMN_13746	RBPMS	NM_006867.2	NM_006867.2		11030	57164967	NM_006867.2	RBPMS	NP_006858.1	ILMN_1708025	0002510369	I	1291	CGAACAATTGCCCTCCTTTGGAAGTACGGCTAATAGAAGCCCTAGATCCG	8	+	30361865-30361914	8p12e	Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 4, mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8855282] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8855282] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	HERMES	HERMES
Homo sapiens	RefSeq	XR_039207.1	ILMN_348856	LOC100130443	XR_039207.1	XR_039207.1		100130443	169211797	XR_039207.1	LOC100130443		ILMN_3192591	0007550553	A	138	TGCAGACCCAGGCTGTGCAACCCCCACAGCAGGTCTCCTCACGGGATAGA				17q21.31a	PREDICTED: Homo sapiens misc_RNA (LOC100130443), miscRNA.					
Homo sapiens	RefSeq	NM_138395.2	ILMN_19018	MARS2	NM_138395.2	NM_138395.2		92935	56550036	NM_138395.2	MARS2	NP_612404.1	ILMN_1679177	0000010440	S	2303	CCCTTGAACCAGTGTCCTAGACCAGATGATTTTTGCCCATGTGTATCCCC	2	+	198280634-198280683	2q33.1b	Homo sapiens methionyl-tRNA synthetase 2, mitochondrial (MARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 15274629] [evidence IDA]	The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6431] [pmid 15274629] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met) [goid 4825] [pmid 15274629] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	mtMetRS; MetRS	mtMetRS; MetRS
Homo sapiens	RefSeq	NM_032034.1	ILMN_14571	SLC4A11	NM_032034.2	NM_032034.2		83959	116256456	NM_032034.2	SLC4A11	NP_114423.1	ILMN_1735156	0007150209	S	2798	AGGTGTAGGTGTGTGGGTGACTGCTCTGTGCTGCGCCTTCTCATGGCTGA	20	-	3208309-3208358	20p13c	Homo sapiens solute carrier family 4, sodium borate transporter, member 11 (SLC4A11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 15525507] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 15525507] [evidence IDA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [pmid 15525507] [evidence IDA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 15525507] [evidence IDA]; The regulation of the levels, transport, and metabolism of cations within a cell or between a cell and its external environment [goid 30003] [pmid 15525507] [evidence IDA]; The directed movement of boron into, out of, within or between cells. Boron is a group 13 element, with properties which are borderline between metals and non-metals [goid 46713] [pmid 15525507] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of facilitated diffusion of a sodium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5272] [pmid 15525507] [evidence IDA];  [goid 5452] [evidence IEA]; Catalysis of facilitated diffusion of a hydrogen ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15252] [pmid 15525507] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transport of boron across a membrane against the concentration gradient [goid 46715] [pmid 15525507] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA];  [goid 5452] [evidence IEA]	CHED2; MGC126419; BTR1; NABC1; CDPD; dJ794I6.2; MGC126418	MGC126419; BTR1; dJ794I6.2; MGC126418
Homo sapiens	RefSeq	NM_003385.4	ILMN_166618	VSNL1	NM_003385.4	NM_003385.4		7447	63252921	NM_003385.4	VSNL1	NP_003376.2	ILMN_2151114	0001170553	S	1883	CCAACTTTTCATCCAGGCTCCCAAAAGAGGGACAACGAACATGGCATGTG	2	+	17701065-17701114	2p24.2b	Homo sapiens visinin-like 1 (VSNL1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	HPCAL3; VILIP-1; HUVISL1; HLP3; VILIP	HPCAL3; VILIP-1; HUVISL1; HLP3; VILIP
Homo sapiens	RefSeq	NM_021200.1	ILMN_2859	PLEKHB1	NM_021200.1	NM_021200.1		58473	10864012	NM_021200.1	PLEKHB1	NP_067023.1	ILMN_1783231	0002690133	S	2114	TAAGATGGCAGTGTTCTCCTCTGGGGCCTGATCCACCTCTACACCAGCCC	11	+	73051246-73051295	11q13.4b	Homo sapiens pleckstrin homology domain containing, family B (evectins) member 1 (PLEKHB1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10585447] [evidence IDA]	The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [pmid 10585447] [evidence NAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10585447] [evidence TAS]	PHR1; PHRET1; KPL1	PHR1; PHRET1; KPL1
Homo sapiens	RefSeq	XM_931267.1	ILMN_32469	LOC646456	XM_931267.1	XM_931267.1		646456	89038019	XM_931267.1	LOC646456	XP_936360.1	ILMN_1690859	0000870440	I	888	GTAAAGTTTTTATTTAAGTATATAGATTACAATGTTTATAAATTTAAGGA	15	-	20749900-20749933:20749934-20749949		PREDICTED: Homo sapiens similar to junction-mediating and regulatory protein, transcript variant 2 (LOC646456), mRNA.					
Homo sapiens	RefSeq	NM_006347.3	ILMN_999	PPIH	NM_006347.3	NM_006347.3		10465	45439322	NM_006347.3	PPIH	NP_006338.1	ILMN_1801913	0005130241	S	568	GCTACCTGTGGTGATCTCGCAGTGTGGGGAGATGTAGTCCAGACAAAGAC	1	+	42905641-42905677:42905678-42905690	1p34.2a	Homo sapiens peptidylprolyl isomerase H (cyclophilin H) (PPIH), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9570313] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9570313] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9570313] [evidence TAS]; The directed movement of a small nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane [goid 6608] [pmid 9570313] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with cyclosporin A, a cyclic undecapeptide that contains several N-methylated and unusual amino acids [goid 16018] [pmid 9570313] [evidence TAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CYPH; CYP-20; USA-CYP; MGC5016; SnuCyp-20	CYPH; CYP-20; USA-CYP; MGC5016; SnuCyp-20
Homo sapiens	Unigene	Hs.214491	ILMN_82423	HS.214491	Hs.214491		Hs.214491		4114287	AI362666			ILMN_1899435	0004760307	S	234	TCCTCTTTCCAACTTCTGACAAGGAGGTGATCCCCAGGCTGGTGTCGGTG					qy58g05.x1 NCI_CGAP_Brn23 Homo sapiens cDNA clone IMAGE:2016248 3, mRNA sequence					
Homo sapiens	RefSeq	NM_172159.2	ILMN_25357	KCNAB1	NM_003471.2	NM_003471.2		7881	27436961	NM_003471.2	KCNAB1	NP_003462.2	ILMN_1744968	0002970279	A	3191	ATCCAGCGAACTGCTGTATGTATAGAGGAGCTGAGGTGCTGTCTAATGGG	3	+	157738977-157739026	3q25.31b	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, beta member 1 (KCNAB1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 7499366] [evidence TAS]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA];  [goid 15459] [pmid 7499366] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KV-BETA-1; Kvb1.3; hKvBeta3; hKvb3; AKR6A3; KCNA1B	KV-BETA-1; Kvb1.3; hKvBeta3; hKvb3; AKR6A3; KCNA1B
Homo sapiens	RefSeq	NM_003471.2	ILMN_25357	KCNAB1	NM_003471.2	NM_003471.2		7881	27436961	NM_003471.2	KCNAB1	NP_003462.2	ILMN_1811072	0003120240	I	342	CCTGCAAACCTGTGAGGCCCAGTGGAGCAGCCGAACAGAAATATGTGGAA	3	+	157343786-157343835	3q25.31b	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, beta member 1 (KCNAB1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 7499366] [evidence TAS]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA];  [goid 15459] [pmid 7499366] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KV-BETA-1; Kvb1.3; hKvBeta3; hKvb3; AKR6A3; KCNA1B	KV-BETA-1; Kvb1.3; hKvBeta3; hKvb3; AKR6A3; KCNA1B
Homo sapiens	RefSeq	XM_001717031.1	ILMN_348821	LOC100129636	XM_001717031.1	XM_001717031.1		100129636	169168603	XM_001717031.1	LOC100129636	XP_001717083.1	ILMN_3269021	0004050520	M	195	TGCCAGATCTCTGTGGCTTAACATTGGAACATAGTGTTCTGGAGGCTGGG				6p22.1a	PREDICTED: Homo sapiens hypothetical protein LOC100129636 (LOC100129636), mRNA.					
Homo sapiens	RefSeq	NM_017922.2	ILMN_28675	PRPF39	NM_017922.2	NM_017922.2		55015	33946298	NM_017922.2	PRPF39	NP_060392.2	ILMN_1692779	0006130598	S	2781	GCCTTAAGGGGTAGGAAGAAAAACCTGACTGCAAATCATGTCAGTGTAGT	14	+	44654154-44654203	14q21.3b	Homo sapiens PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae) (PRPF39), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC149842; FLJ11128; FLJ20666; MGC149843	MGC149842; FLJ11128; FLJ20666; MGC149843
Homo sapiens	RefSeq	NM_021637.1	ILMN_18685	TMEM35	NM_021637.1	NM_021637.1		59353	11056011	NM_021637.1	TMEM35	NP_067650.1	ILMN_2227266	0001470273	S	1482	CCCAAAGTTGCCTCACTTCCACTATTCTCAGCAGCCAACCAGGATTTGGC	X	+	100237450-100237499	Xq22.1c	Homo sapiens transmembrane protein 35 (TMEM35), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ14084	FLJ14084
Homo sapiens	RefSeq	XM_939797.1	ILMN_138020	DKFZP434I1020	XM_939797.1	XM_939797.1		196968	89039330	XM_939797.1	DKFZp434I1020	XP_944890.1	ILMN_1772934	0005360367	I	18	AAGTAGGACAGAACCCAATGTAGTCAAGAGAGTTATGACCCTGAGGTGTG				15q26.3b	PREDICTED: Homo sapiens hypothetical protein DKFZp434I1020 (DKFZp434I1020), mRNA.					
Homo sapiens	RefSeq	XM_292122.6	ILMN_38187	LOC338829	XM_292122.6	XM_292122.6		338829	89060480	XM_292122.6	LOC338829	XP_292122.6	ILMN_1687276	0004280500	S	3306	GGGGACGTTTGAGAACTACGGTTCGACTGCTGGTGAGGGAGCCATGAAAC	X	-	42479-42528		PREDICTED: Homo sapiens hypothetical LOC338829 (LOC338829), mRNA.					
Homo sapiens	Unigene	Hs.406106	ILMN_89839	HS.406106	Hs.406106		Hs.406106		27822107	BX090408			ILMN_1819494	0005340521	S	543	CCAGCAGGGTACAGAGGGCATTTGTGGGAGCAGTTAGGAAACCAGGACGT	5	+	118762876-118762925		BX090408 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998E08415 ; IMAGE:211951, mRNA sequence					
Homo sapiens	RefSeq	XM_944098.1	ILMN_30657	LOC650217	XM_944098.1	XM_944098.1		650217	89030467	XM_944098.1	LOC650217	XP_949191.1	ILMN_1806319	0006660746	S	172	AAGAACTTCAGAGGACAGGAGCGCTACCTCGAGCAAAGAACCGCGGGTGG					PREDICTED: Homo sapiens hypothetical protein LOC650217 (LOC650217), mRNA.					
Homo sapiens	Unigene	Hs.534439	ILMN_102294	HS.534439	Hs.534439		Hs.534439		50472846	CR592039			ILMN_1916256	0002750575	S	36	CAAGCCTGGCAGTAAATCCGAATATCCAGAACCCTGACCCTGCCGTGTAC	14	+	22041096-22041115:22086287-22086316		full-length cDNA clone CS0CAP005YH21 of Thymus of Homo sapiens (human)					
Homo sapiens	RefSeq	XM_940486.1	ILMN_38101	PLEKHA2	XM_940486.1	XM_940486.1		59339	89028612	XM_940486.1	PLEKHA2	XP_945579.1	ILMN_1768681	0007400685	S	139	CAGAACCTGACTCTCGGGGCTGGGAGCTCTAAAGTGCTACAGATGTTATC				8p11.23b	PREDICTED: Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 (PLEKHA2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 11001876] [evidence IDA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]		
Homo sapiens	RefSeq	NM_016069.8	ILMN_21729	MAGMAS	NM_016069.8	NM_016069.8		51025	27363460	NM_016069.8	Magmas	NP_057153.8	ILMN_1763884	0006380220	S	339	TTCTACCTGCAGTCAAAGGTGGTCCGCGCAAAGGAGCGCCTGGATGAGGA	16	-	4390374-4390406:4390921-4390937	16p13.3b	Homo sapiens mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction (Magmas), nuclear gene encoding mitochondrial protein, mRNA.				CGI-136	CGI-136
Homo sapiens	RefSeq	NM_002667.2	ILMN_9327	PLN	NM_002667.2	NM_002667.2		5350	29171725	NM_002667.2	PLN	NP_002658.1	ILMN_1730811	0003190204	S	1269	TCCAGCCTAACATCCAATGCAGGCAAGGAAAATAAAAGATTTCCAGTGAC	6	+	118987865-118987914	6q22.31a	Homo sapiens phospholamban (PLN), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8406504] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction [goid 45822] [evidence IEA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence ISS]	 [goid 5246] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15598648] [evidence IPI]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of ATP to ADP and orthophosphate [goid 42030] [evidence IEA]	PLB; CMD1P	PLB; CMD1P
Homo sapiens	RefSeq	NM_002667.2	ILMN_9327	PLN	NM_002667.2	NM_002667.2		5350	29171725	NM_002667.2	PLN	NP_002658.1	ILMN_2192245	0004250689	S	1434	CAGCTGACCCTTGAACATGGGGGTTAGGGGAGCTGACAATTCGTGGGTCC	6	+	118988030-118988079	6q22.31a	Homo sapiens phospholamban (PLN), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8406504] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction [goid 45822] [evidence IEA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence ISS]	 [goid 5246] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15598648] [evidence IPI]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of ATP to ADP and orthophosphate [goid 42030] [evidence IEA]	PLB; CMD1P	PLB; CMD1P
Homo sapiens	RefSeq	NM_006089.1	ILMN_2704	SCML2	NM_006089.1	NM_006089.1		10389	5174668	NM_006089.1	SCML2	NP_006080.1	ILMN_1698191	0000070112	S	3258	CCCATCGTTGCTATCACCAGTACCTCTCAGCTTACTCTTCAGGGGATATG	X	-	18168178-18168227	Xp22.13c	Homo sapiens sex comb on midleg-like 2 (Drosophila) (SCML2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10331946] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10331946] [evidence TAS]		
Homo sapiens	RefSeq	XM_001725183.1	ILMN_346681	LOC100131572	XM_001725183.1	XM_001725183.1		100131572	169161254	XM_001725183.1	LOC100131572	XP_001725235.1	ILMN_3289171	0006350440	M	62	CCCTCCCCAGAAGAGGAGAAGAGGAAACACAAGAAGAAACGCCTGGTGCA	1	+	37794462-37794511	1p34.3c	PREDICTED: Homo sapiens similar to hCG1783679 (LOC100131572), mRNA.					
Homo sapiens	RefSeq	NM_014047.1	ILMN_24668	C19ORF53	NM_014047.2	NM_014047.2		28974	109948286	NM_014047.2	C19orf53	NP_054766.1	ILMN_1671374	0003460184	S	507	GATACAGTCACTAACTTCATCTGTCCCCGTGCCCCTTCCCAGGTCCTGCC	19	+	13750184-13750233	19p13.13a	Homo sapiens chromosome 19 open reading frame 53 (C19orf53), mRNA.				HSPC023	
Homo sapiens	RefSeq	NM_021150.1	ILMN_165063	GRIP1	NM_021150.1	NM_021150.1		23426	103472121	NM_021150.1	GRIP1	NP_066973.1	ILMN_2304289	0003180040	A	2940	GGACTCTGACATGGAGGACTTTGGGTTCAGTGTAGCAGATGGCTTACTGG	12	-	65033546-65033595	12q14.3b-q14.3c	Homo sapiens glutamate receptor interacting protein 1 (GRIP1), mRNA. XM_934804 XM_942244 XM_945816 XM_945820 XM_945822 XM_945824 XM_945825	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10197531] [evidence NAS]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 15572661] [evidence NAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10197531] [evidence NAS]; Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [pmid 10197531] [evidence NAS]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	GRIP	GRIP
Homo sapiens	RefSeq	Hs.566124	ILMN_166200	LOC728709	XM_001128250.1	XM_001128250.1		728709	113415613	XM_001128250.1	LOC728709	XP_001128250.1	ILMN_1912354	0007050100	S	333	TGACCATCCTGTGGTCTTGAAACATGGCTCTTCATGGGGGTGGAGTCAGG	4	+	63691709-63691758	4q13.1d	PREDICTED: Homo sapiens hypothetical protein LOC728709 (LOC728709), mRNA.					
Homo sapiens	RefSeq	XR_040523.1	ILMN_344551	LOC730378	XR_040523.1	XR_040523.1		730378	169170249	XR_040523.1	LOC730378		ILMN_3243296	0006040762	S	293	TACCCTACCTCACAGCAGTCTCCGCAGATGAGGCTACTGCCTCACAACAG	7	-	51466292-51466341		PREDICTED: Homo sapiens misc_RNA (LOC730378), miscRNA.					
Homo sapiens	RefSeq	NM_004133.3	ILMN_12180	HNF4G	NM_004133.3	NM_004133.3		3174	40254474	NM_004133.3	HNF4G	NP_004124.3	ILMN_1743394	0002900088	S	3320	TGCCTTGGTCTGTGCAGGCTGCTGTAATGAAATACTATGAACTTGGCAGC	8	+	76640843-76640892	8q21.11c	Homo sapiens hepatocyte nuclear factor 4, gamma (HNF4G), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8622695] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8622695] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR2A2	NR2A2
Homo sapiens	RefSeq	NM_001009899.1	ILMN_29746	KIAA2018	NM_001009899.2	NM_001009899.2		205717	114431247	NM_001009899.2	KIAA2018	NP_001009899.2	ILMN_1675445	0006480161	S	8392	CAGGCCTGCCATCTGAAAATGGGAAATTGAGACCTGAGACCTGCTAAAGC	3	-	114855188-114855237	3q13.2b	Homo sapiens KIAA2018 (KIAA2018), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2) [goid 4571] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	DKFZp781O0144	DKFZp781O0144
Homo sapiens	RefSeq	XM_373463.3	ILMN_31272	LOC387686	XM_373463.3	XM_373463.3		387686	89031336	XM_373463.3	LOC387686	XP_373463.3	ILMN_1762189	0004760446	S	1	ATGGTGACACCAAGGGGACTCTGCATGGGCACATCCCGGCCCTCCTCCCT	10	-	71437556-71437605		PREDICTED: Homo sapiens hypothetical LOC387686 (LOC387686), mRNA.					
Homo sapiens	RefSeq	NM_003341.3	ILMN_7115	UBE2E1	NM_003341.3	NM_003341.3		7324	33359692	NM_003341.3	UBE2E1	NP_003332.1	ILMN_2371685	0004050070	A	275	GTAAAGTCAGCATGAGCAAAAACTCCAAACTCCTCTCCACCAGCGCCAAG	3	+	23823865-23823914	3p24.2b	Homo sapiens ubiquitin-conjugating enzyme E2E 1 (UBC4/5 homolog, yeast) (UBE2E1), transcript variant 1, mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8576257] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The covalent addition to a protein of ISG15, a ubiquitin-like protein [goid 32020] [pmid 16428300] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 8576257] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the covalent attachment of the ubiquitin-like protein ISG15 to other proteins [goid 42296] [pmid 16428300] [evidence IDA]	UBCH6	UBCH6
Homo sapiens	RefSeq	XM_379203.2	ILMN_309649	LNP1	NM_001085451.1	NM_001085451.1		348801	146260272	NM_001085451.1	LNP1	NP_001078920.1	ILMN_1704166	0006760181	A	1876	CCAATTCACCATTTCAGGATGTGGATGGGGGCGGGGTTGGGGGTAAAAAC	3	+	100174829-100174878	3q12.2a	Homo sapiens leukemia NUP98 fusion partner 1 (LNP1), mRNA.					
Homo sapiens	RefSeq	NM_000193.2	ILMN_27314	SHH	NM_000193.2	NM_000193.2		6469	21071042	NM_000193.2	SHH	NP_000184.1	ILMN_1652693	0000290386	S	1208	ACCATTCTCATCAACCGGGTGCTGGCCTCGTGCTACGCGGTCATCGAGGA	7	-	155595876-155595925	7q36.3a	Homo sapiens sonic hedgehog homolog (Drosophila) (SHH), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence ISS]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence ISS]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence ISS]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence ISS]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence ISS]; Branching of the ureteric bud [goid 1658] [evidence ISS]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence ISS]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence ISS]; Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IEA]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence ISS]; Any process that increases the activity of a transcription factor that activates transcription of Hedgehog-target genes in response to Smoothened signaling. In Drosophila, Cubitus interruptus (Ci) is the only identified transcription factor so far in the Hedgehog signaling pathway. In vertebrates, members of the Gli protein family are activated in this way. Activation of the Gli/Ci transcription factor is distinct from its stabilization, when proteolytic cleavage is inhibited [goid 7228] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence ISS]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence ISS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence ISS]; The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate [goid 7418] [pmid 8896572] [evidence TAS]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [evidence ISS]; The process by which the anatomical structures of the hindgut are generated and organized. Morphogenesis pertains to the creation of form [goid 7442] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 8209] [evidence ISS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence ISS]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IEA]; The removal of an internal amino acid sequence (an intein) from a protein during protein maturation; the excision of inteins is precise and the N- and C-terminal exteins are joined by a normal peptide bond. Protein splicing involves 4 nucleophilic displacements by the 3 conserved splice junction residues [goid 16539] [evidence IEA]; The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord [goid 21513] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IEA]; The process that activates or increases the rate or extent of granule cell precursor proliferation [goid 21940] [evidence IEA]; The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops [goid 21978] [evidence IEA]; Any process that modulates the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 30162] [evidence ISS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence ISS]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence ISS]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence ISS]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence ISS]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence ISS]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence ISS]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32435] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence ISS]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of alpha-beta T cell differentiation [goid 46639] [evidence IEA]; Development, taking place during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48568] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IEA]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IEA]; The process whereby neuroepithelial cells of the neural tube give rise to Brgmann glial cells, specialized bipotential progenitors cells of the cerebellum. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 60020] [evidence IEA]	Interacting selectively with the patched (ptc) protein, a receptor for hedgehog proteins [goid 5113] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with laminin-1, a glycoprotein trimer with the subunit composition alpha1, beta1, gamma1 [goid 43237] [evidence ISS]	TPTPS; HHG1; HPE3; TPT; SMMCI; HLP3	TPTPS; HHG1; HPE3; TPT; SMMCI; HLP3
Homo sapiens	RefSeq	NM_138768.2	ILMN_4623	MYEOV	NM_138768.2	NM_138768.2		26579	42794611	NM_138768.2	MYEOV	NP_620123.2	ILMN_2198413	0006100360	S	1936	TGCTGGGTGTGTTGCATGGCCCTCCCAACCAATTCAGTATTTTTCTCCCC	11	+	68820979-68821028	11q13.2c	Homo sapiens myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas) (MYEOV), mRNA.				OCIM	OCIM
Homo sapiens	RefSeq	NM_032448.1	ILMN_10767	FAM120B	NM_032448.1	NM_032448.1		84498	24308333	NM_032448.1	FAM120B	NP_115824.1	ILMN_1679641	0007610121	S	3017	AGAGCTTTTGTTGGCTTCTCTCCCGAGCTTGTGCCTGATTCTGTGGCCCA	6	+	170555940-170555989	6q27f	Homo sapiens family with sequence similarity 120B (FAM120B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		KIAA1838; dJ894D12.1; PGCC1; KIAA0183	KIAA1838; dJ894D12.1; PGCC1; KIAA0183
Homo sapiens	RefSeq	NR_031697.1	ILMN_388616	MIR1284	NR_031697.1	NR_031697.1		100302112	269847481	NR_031697.1	MIR1284		ILMN_3309499	0006550605	S	67	GGAAAGCCCATGTTTGTATTGGAAACTGCTGGTTTCTTTCATACTGAAAA					Homo sapiens microRNA 1284 (MIR1284), microRNA.					
Homo sapiens	RefSeq	XM_942004.1	ILMN_41870	LOC652525	XM_942004.1	XM_942004.1		652525	89062979	XM_942004.1	LOC652525	XP_947097.1	ILMN_1696837	0001510600	S	23	GTAGAGGGGGGCAACACATAATGCCTTCACTGTGGGAGCTTCATCAAGGA				16p11.2a	PREDICTED: Homo sapiens similar to protein kinase CHK2 isoform b (LOC652525), mRNA.					
Homo sapiens	RefSeq	NM_033332.1	ILMN_138249	CDC14B	NM_033332.1	NM_033332.1		8555	15451937	NM_033332.1	CDC14B	NP_201589.1	ILMN_1661363	0004200148	I	4832	TCCATGGAGTCTATTTTACAACCTCCTTTCCCTCCATGCTTCCGCGGAGG	9	-	98292422-98292471	9q22.33a	Homo sapiens CDC14 cell division cycle 14 homolog B (S. cerevisiae) (CDC14B), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9367992] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9367992] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 9367992] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 9367992] [evidence IDA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CDC14B3; hCDC14B; Cdc14B1; Cdc14B2	CDC14B3; hCDC14B; Cdc14B1; Cdc14B2
Homo sapiens	RefSeq	NM_001033112.1	ILMN_14455	PAIP2	NM_001033112.1	NM_001033112.1		51247	75677354	NM_001033112.1	PAIP2	NP_001028284.1	ILMN_1784753	0000240725	A	1070	CTGAGGCTACAAGTTAGTCAGCAGATGAGTGCCAGTCCAGCCTTTTCTGG	5	+	138704975-138705024	5q31.2d	Homo sapiens poly(A) binding protein interacting protein 2 (PAIP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11172725] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of translational initiation [goid 45947] [pmid 11172725] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11172725] [evidence IPI]; Antagonizes ribosome-mediated translation of mRNA into a polypeptide [goid 30371] [pmid 11172725] [evidence IDA]	PAIP2A; MGC72018	PAIP2A; MGC72018
Homo sapiens	RefSeq	NM_001033112.1	ILMN_14455	PAIP2	NM_001033112.1	NM_001033112.1		51247	75677354	NM_001033112.1	PAIP2	NP_001028284.1	ILMN_2267104	0003990008	I	106	TTCGCCATCGCTACCCCTTATTTTTGGTTGTATTGCAGCTCATGCCCTGG	5	+	138678239-138678288	5q31.2d	Homo sapiens poly(A) binding protein interacting protein 2 (PAIP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11172725] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of translational initiation [goid 45947] [pmid 11172725] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11172725] [evidence IPI]; Antagonizes ribosome-mediated translation of mRNA into a polypeptide [goid 30371] [pmid 11172725] [evidence IDA]	PAIP2A; MGC72018	PAIP2A; MGC72018
Homo sapiens	RefSeq	NM_020847.1	ILMN_3173	TNRC6A	NM_014494.2	NM_014494.2		27327	116805347	NM_014494.2	TNRC6A	NP_055309.2	ILMN_1739573	0000130386	I	522	ACCTCCACGATTTCGCCACCAGGAACACAAACAGCTTCTAAAGAGGGGTC	16	+	24695999-24696048	16p12.1b	Homo sapiens trinucleotide repeat containing 6A (TNRC6A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC75384; GW182; TNRC6; FLJ22043; CAGH26; KIAA1460; DKFZp666E117; GW1	MGC75384; GW182; TNRC6; CAGH26; KIAA1460; DKFZp666E117
Homo sapiens	RefSeq	NM_014494.1	ILMN_3173	TNRC6A	NM_014494.2	NM_014494.2		27327	116805347	NM_014494.2	TNRC6A	NP_055309.2	ILMN_1714622	0001780563	I	6381	ATGAGCTTTTCCCTTTGCACTGAATGATGTTCTCTCCGTCTCATCGGCAG	16	+	24742840-24742889	16p12.1b	Homo sapiens trinucleotide repeat containing 6A (TNRC6A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC75384; GW182; TNRC6; FLJ22043; CAGH26; KIAA1460; DKFZp666E117; GW1	MGC75384; GW182; TNRC6; CAGH26; KIAA1460; DKFZp666E117
Homo sapiens	RefSeq	NM_020847.1	ILMN_3173	TNRC6A	NM_014494.2	NM_014494.2		27327	116805347	NM_014494.2	TNRC6A	NP_055309.2	ILMN_1752409	0006220243	A	5792	GCCGGACCGATCTCAATCACTGGAATGGTGCTGGGCTGTCGGGAACTAAC	16	+	24741833-24741835:24742254-24742300	16p12.1b	Homo sapiens trinucleotide repeat containing 6A (TNRC6A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC75384; GW182; TNRC6; FLJ22043; CAGH26; KIAA1460; DKFZp666E117; GW1	MGC75384; GW182; TNRC6; CAGH26; KIAA1460; DKFZp666E117
Homo sapiens	RefSeq	NM_018666.1	ILMN_183391	SAGE1	NM_018666.1	NM_018666.1		55511	8924241	NM_018666.1	SAGE1	NP_061136.1	ILMN_2124433	0006040242	S	2520	GCGGTAGGCACCAAAAACTACAGTGTCTCTGCAGGTGACCCACCAGTTAC	X	+	134821610-134821659	Xq26.3b	Homo sapiens sarcoma antigen 1 (SAGE1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]			SAGE	SAGE
Homo sapiens	RefSeq	NM_001005325.1	ILMN_7724	OR6M1	NM_001005325.1	NM_001005325.1		390261	52693922	NM_001005325.1	OR6M1	NP_001005325.1	ILMN_1815093	0000050504	S	592	CTCCTCTCTGCCCTTGTCATCCTGAGCTCCCTGGCATTCACTACTGGGTC	11	-	123676416-123676465	11q24.1c	Homo sapiens olfactory receptor, family 6, subfamily M, member 1 (OR6M1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-271	OR11-271
Homo sapiens	RefSeq	NM_006033.2	ILMN_13411	LIPG	NM_006033.2	NM_006033.2		9388	62422575	NM_006033.2	LIPG	NP_006024.1	ILMN_1689037	0002600440	S	3305	GGCTGAGATTCGGGAGGAAGTGTGACACCAAGCAGGAGAGGAAGAATGAT	18	+	45372440-45372489	18q21.1f	Homo sapiens lipase, endothelial (LIPG), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate [goid 4465] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 2-acylglycerophosphocholine + a carboxylate [goid 8970] [pmid 10318835] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	EL; PRO719; EDL	EL; PRO719; EDL
Homo sapiens	RefSeq	NM_006033.2	ILMN_13411	LIPG	NM_006033.2	NM_006033.2		9388	62422575	NM_006033.2	LIPG	NP_006024.1	ILMN_2189027	0007210681	S	3853	GGTTGCTCAACCCATATTATTGGCTGTACATCCTGGTCACTTCTGACTTC	18	+	45372988-45373037	18q21.1f	Homo sapiens lipase, endothelial (LIPG), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate [goid 4465] [evidence IEA]; Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 2-acylglycerophosphocholine + a carboxylate [goid 8970] [pmid 10318835] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	EL; PRO719; EDL	EL; PRO719; EDL
Homo sapiens	RefSeq	NM_032869.2	ILMN_24586	NUDCD1	NM_032869.2	NM_032869.2		84955	31377641	NM_032869.2	NUDCD1	NP_116258.1	ILMN_1678745	0003360139	S	3702	GGTCTAGAGCCGTGATTTCAAGCTATTTTCCTGAAATGCTTCAGGGATTC	8	-	110322490-110322539	8q23.1d	Homo sapiens NudC domain containing 1 (NUDCD1), mRNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]		CML66; FLJ14991	CML66; FLJ14991
Homo sapiens	RefSeq	XM_937612.1	ILMN_36955	LOC91664	XM_937612.1	XM_937612.1		91664	89057621	XM_937612.1	LOC91664	XP_942705.1	ILMN_1791642	0004860541	A	42	TTGGGCAGCAGGGATTGTTCAGGGGCCACATCTGGATGCACTGTCAGCTC				19q13.41b	PREDICTED: Homo sapiens hypothetical protein BC007307 (LOC91664), mRNA.					
Homo sapiens	RefSeq	NM_002225.2	ILMN_13293	IVD	NM_002225.2	NM_002225.2		3712	6031167	NM_002225.2	IVD	NP_002216.1	ILMN_1724207	0006020398	S	1880	TTGGTGACTCTGTGCCCTTGCTCTCTAACTTCTGAGCCCACCTCCCAGGG	15	+	38498019-38498068	15q15.1a	Homo sapiens isovaleryl Coenzyme A dehydrogenase (IVD), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 2063866] [evidence NAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3-methylbutanoyl-CoA + ETF = 3-methylbut-2-enoyl-CoA + reduced ETF [goid 8470] [pmid 3446585] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	ACAD2	ACAD2
Homo sapiens	RefSeq	XM_001721691.1	ILMN_337514	LOC100133598	XM_001721691.1	XM_001721691.1		100133598	169205156	XM_001721691.1	LOC100133598	XP_001721743.1	ILMN_3237868	0002320240	S	144	TGGAGAAGTAAGGAGGTACCACTCTCAAGGAGGCTGTCAGTAGAGGGGAC					PREDICTED: Homo sapiens hypothetical LOC100133598 (LOC100133598), mRNA.					
Homo sapiens	RefSeq	XM_936710.1	ILMN_46685	KIAA0738	XM_936710.1	XM_936710.1		9747	89066668	XM_936710.1	KIAA0738	XP_941803.1	ILMN_1779969	0005050528	I	652	CCTCTACCTCTGCCTCCCAGGGTCTGGCCTTGTCCTCTTAGTTCATTGCC				7q35a	PREDICTED: Homo sapiens KIAA0738 gene product, transcript variant 3 (KIAA0738), mRNA.					
Homo sapiens	RefSeq	XR_037228.1	ILMN_338569	LOC649395	XR_037228.1	XR_037228.1		649395	169170128	XR_037228.1	LOC649395		ILMN_3279996	0006650022	M	610	CGCTGAGTGAAGAAAGCTATAAGGACACTATGGACTTCAGGCATGCAGGG	7	+	63532301-63532350	7q11.21c	PREDICTED: Homo sapiens misc_RNA (LOC649395), miscRNA.					
Homo sapiens	RefSeq	NM_032219.2	ILMN_166361	MFSD7	XM_001127310.1	XM_001127310.1		84179	113415939	XM_001127310.1	MFSD7	XP_001127310.1	ILMN_1681310	0005260113	S	1300	TGCACCTTCTTCAGCTGCATCCTGGCGGTCTTCTTCCACACCCCATACCG				4p16.3d	PREDICTED: Homo sapiens major facilitator superfamily domain containing 7 (MFSD7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			FLJ22269; LP2561
Homo sapiens	RefSeq	XM_932019.1	ILMN_38932	LOC644143	XM_932019.1	XM_932019.1		644143	89035402	XM_932019.1	LOC644143	XP_937112.1	ILMN_1693513	0000160041	S	250	AAGGACTCTGGCCCTGCAAGAGCTCTCTCGCGCCCACCCTGCCCCGAGCT	12	-	9692029-9692058:9693420-9693439		PREDICTED: Homo sapiens hypothetical protein LOC644143 (LOC644143), mRNA.					
Homo sapiens	RefSeq	NM_016001.1	ILMN_17736	UTP18	NM_016001.2	NM_016001.2		51096	118344455	NM_016001.2	UTP18	NP_057085.2	ILMN_1779584	0004860142	S	1243	CGCCTCTTCGGGGGATGGAGAAGTTTATGTTTGGGATGTGAACTCAAGGA	17	+	46712829-46712839:46717605-46717643	17q21.33c	Homo sapiens UTP18, small subunit (SSU) processome component, homolog (yeast) (UTP18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15199122] [evidence IDA]; A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [pmid 15590835] [evidence ISS]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15590835] [evidence ISS]	WDR50; CGI-48	CGI-48
Homo sapiens	RefSeq	NM_012162.1	ILMN_5340	FBXL6	NM_012162.1	NM_012162.1		26233	16306575	NM_012162.1	FBXL6	NP_036294.1	ILMN_1799389	0001470092	A	1659	TGGGACACCTCAGCCAGCTTGCCCACCCTCCACCTTTGCCCAATTTCAGA	8	-	145579127-145579176	8q24.3h	Homo sapiens F-box and leucine-rich repeat protein 6 (FBXL6), transcript variant 1, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PP14630; FBL6	PP14630; FBL6
Homo sapiens	RefSeq	XM_930505.1	ILMN_41958	LOC645676	XM_930505.1	XM_930505.1		645676	88943514	XM_930505.1	LOC645676	XP_935598.1	ILMN_1761266	0001980139	I	121	GCTAACTTATAAGGGGAACTCCATTACACTTACACAAATAAAGGCAAACT	1	+	153797937-153797986	1q22b	PREDICTED: Homo sapiens hypothetical protein LOC645676, transcript variant 1 (LOC645676), mRNA.					
Homo sapiens	RefSeq	NM_019061.2	ILMN_162316	MTMR12	NM_001040446.1	NM_001040446.1		54545	94721262	NM_001040446.1	MTMR12	NP_001035536.1	ILMN_1802831	0006590685	S	4493	ACCTCCACTTCCTTCTCTGCCCCATTGCCTCCCAAATATGCTATGGAGCT	5	-	32264395-32264444	5p13.3c	Homo sapiens myotubularin related protein 12 (MTMR12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	3-PAP; PIP3AP	3-PAP; PIP3AP
Homo sapiens	RefSeq	NM_005250.1	ILMN_19300	FOXL1	NM_005250.2	NM_005250.2		2300	109715868	NM_005250.2	FOXL1	NP_005241.1	ILMN_1741692	0006900541	S	983	CAAGTCCAAGAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCAGGGCC	16	+	85170598-85170647	16q24.1c	Homo sapiens forkhead box L1 (FOXL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7957066] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 11078474] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 20530220] [evidence TAS]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [pmid 95045392] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 7957066] [evidence IDA]	FREAC7; FKH6; FKHL11	FREAC7; FKH6; FKHL11
Homo sapiens	RefSeq	NM_001003808.1	ILMN_25308	C1ORF222	NM_001003808.1	NM_001003808.1		339457	51339035	NM_001003808.1	C1orf222	NP_001003808.1	ILMN_1749317	0004730056	S	2600	CAAGCCCAGGGACATCCAAGAGCACCCCTCCTGAGACCCCAGACTCAGAA	1	-	1843362-1843411	1p36.33a	Homo sapiens chromosome 1 open reading frame 222 (C1orf222), mRNA.				MGC133181	MGC133181
Homo sapiens	RefSeq	NR_031690.1	ILMN_388740	MIR548I4	NR_031690.1	NR_031690.1		100302191	269847450	NR_031690.1	MIR548I4		ILMN_3308285	0005340376	S	20	GCGGATTTTGCCATACTTTTAACGGCAAAAACCACAAATATTATTGCACC					Homo sapiens microRNA 548i-4 (MIR548I4), microRNA.					
Homo sapiens	RefSeq	NM_174942.1	ILMN_5609	GAS2L3	NM_174942.1	NM_174942.1		283431	28372562	NM_174942.1	GAS2L3	NP_777602.1	ILMN_2211003	0006400356	S	2156	GGGCCTCCCAGAAGTGGCAAAACCCCAGCTTCAATCAGGAAACCACCCTC	12	+	99542644-99542693	12q23.1d	Homo sapiens growth arrest-specific 2 like 3 (GAS2L3), mRNA.		The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]			
Homo sapiens	RefSeq	NM_006784.1	ILMN_173263	WDR3	NM_006784.1	NM_006784.1		10885	5803220	NM_006784.1	WDR3	NP_006775.1	ILMN_1711254	0003370243	S	3633	GGGCACTGACCCACCCCTACGCCCCGCACAGTCAAAAATCTGCATATAAC	1	+	118304347-118304396	1p12c	Homo sapiens WD repeat domain 3 (WDR3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10395803] [evidence TAS]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		FLJ12796	FLJ12796
Homo sapiens	RefSeq	NM_001544.3	ILMN_29875	ICAM4	NM_001544.3	NM_001544.3		3386	85068575	NM_001544.3	ICAM4	NP_001535.1	ILMN_2393067	0003870392	A	695	TGGTGGTCCGCAACAGCTCGGCACCCATTACACTGATGCTCGCTTGGAGC	19	+	10259473-10259514:10259662-10259669	19p13.2c	Homo sapiens intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) (ICAM4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11857637] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 6431896] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 6431896] [evidence TAS]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [pmid 8566017] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LW; CD242	LW; CD242
Homo sapiens	RefSeq	XM_001717729.1	ILMN_334640	LOC100128203	XM_001717729.1	XM_001717729.1		100128203	169163529	XM_001717729.1	LOC100128203	XP_001717781.1	ILMN_3252724	0001410431	M	97	GGACTTCATCTTGAAGGTGGACTATATGGGCCCTCCTATGCCCCAGAGAC	2	+	215202492-215202507:215270651-215270684	2q35a	PREDICTED: Homo sapiens similar to endosulfine alpha (LOC100128203), mRNA.					
Homo sapiens	RefSeq	NM_024507.2	ILMN_24695	KREMEN2	NM_024507.2	NM_024507.2		79412	27437002	NM_024507.2	KREMEN2	NP_078783.1	ILMN_2382290	0003940195	A	1826	GGACCTGTATGTGGGGGTGGTCTCTGGTTTCGGAGGTCTTTGAACCCCTC	16	+	2958233-2958282	16p13.3d	Homo sapiens kringle containing transmembrane protein 2 (KREMEN2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC16709; KRM2; MGC10791	MGC16709; KRM2; MGC10791
Homo sapiens	RefSeq	XM_939076.1	ILMN_31959	LOC649990	XM_939076.1	XM_939076.1		649990	89042816	XM_939076.1	LOC649990	XP_944169.1	ILMN_1679471	0006480445	S	1	ATGACAGTCGGGGGCAAGGACATTGAGTTTCTTGTCAATACTGGTGCTGA					PREDICTED: Homo sapiens hypothetical protein LOC649990 (LOC649990), mRNA.					
Homo sapiens	RefSeq	NR_029889.1	ILMN_388260	MIR337	NR_029889.1	NR_029889.1		442905	262206335	NR_029889.1	MIR337		ILMN_3308415	0003440286	S	17	GGTGGGAACGGCTTCATACAGGAGTTGATGCACAGTTATCCAGCTCCTAT				14q32.31a	Homo sapiens microRNA 337 (MIR337), microRNA.					
Homo sapiens	RefSeq	NM_201648.1	ILMN_181025	GLYAT	NM_201648.2	NM_201648.2		10249	111038136	NM_201648.2	GLYAT	NP_964011.2	ILMN_1811345	0007380112	I	1825	GGTGGGAGCACCTTGACCCAGGGATGTGATGGTTTATTGAGGAGAGATAG	11	-	58476410-58476459	11q12.1c	Homo sapiens glycine-N-acyltransferase (GLYAT), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9202629] [evidence TAS]	The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 7802672] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 9202629] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [pmid 9202629] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acyl-CoA + glycine = CoA + N-acylglycine [goid 47961] [evidence IEA]	ACGNAT; CAT; GAT	ACGNAT; CAT; GAT
Homo sapiens	RefSeq	NM_018838.3	ILMN_26981	NDUFA12	NM_018838.3	NM_018838.3		55967	40548409	NM_018838.3	NDUFA12	NP_061326.1	ILMN_1737738	0005090050	S	87	TGCAGCAGATCACCGGCCACGGCGGTCTCCGAGGCTATCTACGGGTTTTT	12	-	95397375-95397424	12q22c-q22d	Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 (NDUFA12), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 12857734] [evidence IDA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 10830904] [evidence NAS]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence NAS]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 10830904] [evidence NAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	DAP13; B17.2	DAP13; B17.2
Homo sapiens	RefSeq	XM_001721601.1	ILMN_343508	LOC100133908	XM_001721601.1	XM_001721601.1		100133908	169206349	XM_001721601.1	LOC100133908	XP_001721653.1	ILMN_3242494	0007510609	S	107	CGCTATAAACGCTTTCTACTCTGAAGCACACAGGGGCTGGGGCTGGCCTT					PREDICTED: Homo sapiens hypothetical protein LOC100133908 (LOC100133908), mRNA.					
Homo sapiens	RefSeq	NM_139264.1	ILMN_4508	ADAMTSL1	NM_139264.1	NM_139264.1		92949	21327694	NM_139264.1	ADAMTSL1	NP_644669.1	ILMN_1706992	0000580747	I	1979	GTGCCCTCCGCCTCAGAAATGACAAAAGACTCTTCACTGAGCCCTGTGGC	9	+	18671139-18671188	9p22.2a-p22.1b	Homo sapiens ADAMTS-like 1 (ADAMTSL1), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC40193; ADAMTSR1	MGC40193; ADAMTSR1
Homo sapiens	RefSeq	XR_042283.1	ILMN_338748	LOC642935	XR_042283.1	XR_042283.1		642935	169208309	XR_042283.1	LOC642935		ILMN_3203765	0001450343	A	3031	TGGTACATGTCTTCCTGGAGGGAGTGCTCCGAGGCCTGTGGCGGTGGTGA	15	-	83604202-83604228:83604309-83604331	15q25.3a	PREDICTED: Homo sapiens misc_RNA (LOC642935), miscRNA.					
Homo sapiens	RefSeq	XR_042283.1	ILMN_338748	LOC642935	XR_042283.1	XR_042283.1		642935	169208309	XR_042283.1	LOC642935		ILMN_3280269	0007510328	M	2362	CCAGAGATGAAGGGCAACGACAGTCCCCTGCAGCCGGGGACTCCCACCTT	15	-	83606324-83606373	15q25.3a	PREDICTED: Homo sapiens misc_RNA (LOC642935), miscRNA.					
Homo sapiens	RefSeq	NM_001025077.1	ILMN_164727	CUGBP2	NM_001025077.2	NM_001025077.2		10659	134152716	NM_001025077.2	CUGBP2	NP_001020248.1	ILMN_1800638	0007400133	I	2090	CCCGGTGCTTAGAGGTTAACTTGGTGGCCTAGGAGAGGGAGAAGCCAGGA	10	+	11363180-11363229	10p14b-p14a	Homo sapiens CUG triplet repeat, RNA binding protein 2 (CUGBP2), transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9887331] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9887331] [evidence TAS]	BRUNOL3; ETR-3; NAPOR	BRUNOL3; ETR-3; NAPOR
Homo sapiens	RefSeq	NM_002923.1	ILMN_26119	RGS2	NM_002923.1	NM_002923.1		5997	4506516	NM_002923.1	RGS2	NP_002914.1	ILMN_2197365	0003400019	S	1243	CTGCAGTGTCCGTTATGAGTGCCAAAAATCTGTCTTGAAGGCAGCTACAC	1	+	191047925-191047974	1q31.2b	Homo sapiens regulator of G-protein signalling 2, 24kDa (RGS2), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 15609325] [evidence NAS]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 10747990] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 10747990] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 10747990] [evidence TAS]	G0S8	G0S8
Homo sapiens	RefSeq	XM_939742.1	ILMN_35764	LOC649169	XM_939742.2	XM_939742.2		649169	113422955	XM_939742.2	LOC649169	XP_944835.1	ILMN_1654493	0004250070	A	881	GACTGGGATCTTGAAAGGGGTAAATCTTCAGCGAAAACAGGCGGCGAACT					PREDICTED: Homo sapiens similar to WD repeat domain 74, transcript variant 1 (LOC649169), mRNA.					
Homo sapiens	RefSeq	NM_001013665.1	ILMN_171621	LOC399744	XM_001133357.1	XM_001133357.1		399744	113430833	XM_001133357.1	LOC399744	XP_001133357.1	ILMN_1724822	0005670091	S	185	CTCCTGCCCAGCTCCCAGCGGCCCTGGTAGACCCACAACTTCCTGAAGCC				10p11.21a	PREDICTED: Homo sapiens hypothetical LOC399744 (LOC399744), mRNA.					
Homo sapiens	RefSeq	NM_005856.1	ILMN_13174	RAMP3	NM_005856.1	NM_005856.1		10268	5032022	NM_005856.1	RAMP3	NP_005847.1	ILMN_1761782	0006040347	S	1105	CCGCTATGGGCTGTGTCCATGACCAGAGGCTGGAGTGGGGGTGTGTTATA	7	+	45190165-45190214	7p13c	Homo sapiens receptor (calcitonin) activity modifying protein 3 (RAMP3), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 10882736] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9620797] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9620797] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 10882736] [evidence TAS]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA];  [goid 15027] [evidence IEA]		
Homo sapiens	RefSeq	XM_928156.1	ILMN_46346	LOC643509	XM_928156.1	XM_928156.1		643509	89047114	XM_928156.1	LOC643509	XP_933249.1	ILMN_1759872	0005340154	A	2564	GTGGAATGGCCCATGCCTGTAGTCCCAGCTACTCGGGAGGCTCAGCAGCA	18	-	22002600-22002649		PREDICTED: Homo sapiens similar to Dihydrofolate reductase, transcript variant 1 (LOC643509), mRNA.					
Homo sapiens	RefSeq	NR_031753.1	ILMN_388675	MIR2276	NR_031753.1	NR_031753.1		100313842	269847734	NR_031753.1	MIR2276		ILMN_3309529	0006510670	S	19	TCTGTCACCTTGCAGACGGCTTTCTCTCCGAATGTCTGCAAGTGTCAGAG					Homo sapiens microRNA 2276 (MIR2276), microRNA.					
Homo sapiens	RefSeq	NM_030631.1	ILMN_24868	SLC25A21	NM_030631.2	NM_030631.2		89874	141802712	NM_030631.2	SLC25A21	NP_085134.1	ILMN_1780417	0000780681	S	1120	GCTTCCCAAGATTATGAGACTTGGACCAGGTGGTGCAGTGATGCTGCTGG	14	-	37149903-37149924:37153033-37153060	14q13.3a-q13.3b	Homo sapiens solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 (SLC25A21), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC126570; ODC1; ODC	MGC126570; ODC1; ODC
Homo sapiens	RefSeq	NM_005645.3	ILMN_3685	TAF13	NM_005645.3	NM_005645.3		6884	63079687	NM_005645.3	TAF13	NP_005636.1	ILMN_2061318	0000290332	S	43	GCGTGCTAGTGGGATGGCAGATGAGGAAGAAGACCCCACGTTTGAGGAAG	1	-	109617677-109617687:109618543-109618569:109618570-109618581	1p13.3b	Homo sapiens TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa (TAF13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [pmid 7729427] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9695952] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9695952] [evidence IPI]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 7729427] [evidence TAS]	TAFII18; MGC22425; TAF2K	TAFII18; MGC22425; TAF2K
Homo sapiens	RefSeq	NM_005645.3	ILMN_3685	TAF13	NM_005645.3	NM_005645.3		6884	63079687	NM_005645.3	TAF13	NP_005636.1	ILMN_2061327	0004150553	S	41	TGGCGTGCTAGTGGGATGGCAGATGAGGAAGAAGACCCCACGTTTGAGGA	1	-	109617679-109617687:109618543-109618569:109618570-109618583	1p13.3b	Homo sapiens TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa (TAF13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [pmid 7729427] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9695952] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9695952] [evidence IPI]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 7729427] [evidence TAS]	TAFII18; MGC22425; TAF2K	TAFII18; MGC22425; TAF2K
Homo sapiens	RefSeq	NM_032120.1	ILMN_19468	DKFZP564O0523	NM_032120.1	NM_032120.1		84060	14149772	NM_032120.1	DKFZP564O0523	NP_115496.1	ILMN_1742276	0002030327	S	783	AACTCAGTGGCCTGCCCTGGTGCACAAAAGGCTATTACGTCTTCAGAGGC	7	+	92001965-92002014	7q21.2b	Homo sapiens hypothetical protein DKFZp564O0523 (DKFZP564O0523), mRNA.				HSPC304; DKFZp686D1651	HSPC304; DKFZp686D1651
Homo sapiens	RefSeq	XR_037935.1	ILMN_339104	LOC646282	XR_037935.1	XR_037935.1		646282	169171699	XR_037935.1	LOC646282		ILMN_3204172	0000460019	A	327	CGACGGTAACGGGTCTCATGCCTTGCAGGAAAGGTTTGGTTGTGAGATCC				7q22.1b	PREDICTED: Homo sapiens misc_RNA (LOC646282), miscRNA.					
Homo sapiens	RefSeq	XM_939938.1	ILMN_38301	LOC650850	XM_939938.1	XM_939938.1		650850	89039111	XM_939938.1	LOC650850	XP_945031.1	ILMN_1804217	0005700338	S	16	CAACAGCCGCCACCACAGCAGCCTGATGCCCATCAGCAGCTTCCCCCCAG					PREDICTED: Homo sapiens hypothetical protein LOC650850 (LOC650850), mRNA.					
Homo sapiens	Unigene	Hs.252466	ILMN_83418	HS.252466	Hs.252466		Hs.252466		9706742	BE504334			ILMN_1861177	0004250487	S	141	GGGAACCCCTGATCCAAGCAGTCTGTGTCCTGGGAGGTGAAGATATGGGG	21	+	39303431-39303480		hv88f05.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3180513 3, mRNA sequence					
Homo sapiens	Unigene	Hs.444249	ILMN_92700	HS.444249	Hs.444249		Hs.444249		6143441	AW139123			ILMN_1841566	0001710100	S	345	GCTGAGGTTCTTGGGGATGAGGGCCAGTTGAAGGTCATCACAGCCTGAGG	21	-	34275790-34275839		UI-H-BI1-aet-a-03-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2720165 3, mRNA sequence					
Homo sapiens	RefSeq	NR_030307.1	ILMN_388028	MIR581	NR_030307.1	NR_030307.1		693166	262205876	NR_030307.1	MIR581		ILMN_3310860	0000770403	S	46	AATTTGTGTGATCTAAAGAACACAAAGAATACCTACACAGAACCACCTGC				5q11.2c	Homo sapiens microRNA 581 (MIR581), microRNA.					
Homo sapiens	RefSeq	NM_005437.1	ILMN_24328	NCOA4	NM_005437.2	NM_005437.2		8031	142375434	NM_005437.2	NCOA4	NP_005428.1	ILMN_1773906	0001300671	S	3316	AGGAGCCTTTCCAGTTATCTTGAGTTGCAGCTCTGTAGTTTCTTGAGGCC	10	+	51260567-51260616	10q11.23b	Homo sapiens nuclear receptor coactivator 4 (NCOA4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8643607] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 15609325] [evidence NAS]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 8643607] [evidence TAS]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 15572661] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15563469] [evidence IPI]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]	RFG; ARA70; DKFZp762E1112; PTC3; ELE1	RFG; ARA70; PTC3; DKFZp762E1112; ELE1
Homo sapiens	RefSeq	NR_003021.2	ILMN_178980	SNORA79	NR_003021.2	NR_003021.2		677845	95007013	NR_003021.2	SNORA79		ILMN_3246206	0001090196	S	5	GACTGTTCTTCCTGTTGCCTTCAGACCTGGCATTAGGATTTTAGGTCATC	14	-	81669124-81669173	14q31.1c	Homo sapiens small nucleolar RNA, H/ACA box 79 (SNORA79), small nucleolar RNA.				ACA65	ACA65
Homo sapiens	RefSeq	XR_040304.1	ILMN_339322	LOC391777	XR_040304.1	XR_040304.1		391777	169167793	XR_040304.1	LOC391777		ILMN_3280952	0001240427	M	767	AAGACTGGGGGCCAAACAGAGCAGTGGGTGAAATGGTCCCTGGGTGACGT				5p13.2b	PREDICTED: Homo sapiens misc_RNA (LOC391777), miscRNA.					
Homo sapiens	RefSeq	XM_001713696.1	ILMN_346135	LOC100130216	XM_001713696.1	XM_001713696.1		100130216	169216128	XM_001713696.1	LOC100130216	XP_001713748.1	ILMN_3244571	0005960601	S	151	CTGACTGAGAGAGTGTAGTGATTAACAGAGTTGTGATGTTAGTTAAGAAA					PREDICTED: Homo sapiens hypothetical protein LOC100130216 (LOC100130216), mRNA.					
Homo sapiens	RefSeq	NM_018147.2	ILMN_15012	FAIM	NM_018147.2	NM_018147.2		55179	50726985	NM_018147.2	FAIM	NP_060617.1	ILMN_1716679	0003850301	I	19	GCGGCGGGCGGTGTCTGCGCGGTCGGTGAGACCCGCGCGGGTGAGACGCT	3	+	138327937-138327986	3q22.3c	Homo sapiens Fas apoptotic inhibitory molecule (FAIM), transcript variant 4, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]		FAIM1	FAIM1
Homo sapiens	RefSeq	NM_021784.3	ILMN_167561	FOXA2	NM_021784.3	NM_021784.3		3170	24497502	NM_021784.3	FOXA2	NP_068556.1	ILMN_1763712	0002230086	I	151	GGTCGTTTGTTGTGGCTGTTAAATTTTAAACTGCCATGCACTCGGCTTCC	20	-	22512901-22512950	20p11.21c	Homo sapiens forkhead box A2 (FOXA2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 12911579] [evidence IDA]; Any process that modulates the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10551] [pmid 12911579] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10868948] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC19807; TCF3B; HNF3B	MGC19807; TCF3B; HNF3B
Homo sapiens	RefSeq	NM_002754.3	ILMN_534	MAPK13	NM_002754.3	NM_002754.3		5603	20986527	NM_002754.3	MAPK13	NP_002745.1	ILMN_1749327	0004280019	S	1654	ATCCTTCCTTGGCTCTTTTTAGCTTGTGGCGGCAGTGGGCAGTCCGTGGC	6	+	36107608-36107657	6p21.31b	Homo sapiens mitogen-activated protein kinase 13 (MAPK13), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9218798] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 9218798] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 12244047] [evidence IDA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244047] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 8339] [pmid 9218798] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC99536; SAPK4; PRKM13; p38delta	MGC99536; SAPK4; PRKM13; p38delta
Homo sapiens	RefSeq	NM_006683.3	ILMN_170669	FAM12A	NM_006683.4	NM_006683.4		10876	92110056	NM_006683.4	FAM12A	NP_006674.2	ILMN_1755674	0007560082	S	102	GGGGCATACTCTTGGCCCTGCTTTGCATCCTTTGCAGGCTGTGTGTATAC	14	+	20285602-20285651	14q11.2b	Homo sapiens family with sequence similarity 12, member A (FAM12A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7514008] [evidence TAS]	The physical displacement of sperm stored from previous mating encounters [goid 7321] [pmid 7514008] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]	HE3-ALPHA; MGC119614; HE3ALPHA; EP3A; MGC119615; HE3A	HE3-ALPHA; MGC119614; HE3ALPHA; EP3A; MGC119615; HE3A
Homo sapiens	RefSeq	NM_207014.1	ILMN_746	WDR78	NM_207014.1	NM_207014.1		79819	46276884	NM_207014.1	WDR78	NP_996897.1	ILMN_1679535	0001240497	I	1638	GTAACCCAAACAAGAATAAGAAGCATTTTTATCTGGCTGTTGACAAAATT	1	-	67303342-67303391	1p31.3a	Homo sapiens WD repeat domain 78 (WDR78), transcript variant 2, mRNA.				RP11-342H21.1; FLJ23129	FLJ23129; RP11-342H21.1
Homo sapiens	RefSeq	NM_207014.1	ILMN_746	WDR78	NM_207014.1	NM_207014.1		79819	46276884	NM_207014.1	WDR78	NP_996897.1	ILMN_1670554	0003190731	A	1572	GGGCACTTTGGATTTAAAGAGCAAAAAAGAGGACTGGCTTGCTGCTGGTC	1	-	67303408-67303457	1p31.3a	Homo sapiens WD repeat domain 78 (WDR78), transcript variant 2, mRNA.				RP11-342H21.1; FLJ23129	FLJ23129; RP11-342H21.1
Homo sapiens	RefSeq	NM_020145.2	ILMN_14480	SH3GLB2	NM_020145.2	NM_020145.2		56904	24431995	NM_020145.2	SH3GLB2	NP_064530.1	ILMN_2158336	0007330259	S	1866	AGCTCAAGCCAAGTCCAGCGGCCGCAGTCTTCACCTCTCCACACTCACTT	9	-	131770381-131770430	9q34.11c	Homo sapiens SH3-domain GRB2-like endophilin B2 (SH3GLB2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11161816] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16518874] [evidence IPI]	PP9455; PP6569; KIAA1848	PP9455; PP6569; KIAA1848
Homo sapiens	RefSeq	NM_033194.1	ILMN_18940	HSPB9	NM_033194.1	NM_033194.1		94086	15082237	NM_033194.1	HSPB9	NP_149971.1	ILMN_1666596	0001190347	S	135	GGACAATGACCATGCCAGAGACGGTTTCCAAATGAAGCTGGATGCCCACG	17	+	37528529-37528578	17q21.2b	Homo sapiens heat shock protein, alpha-crystallin-related, B9 (HSPB9), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15503857] [evidence IPI]	FLJ27437	FLJ27437
Homo sapiens	RefSeq	XM_927815.1	ILMN_39183	LOC644719	XM_927815.1	XM_927815.1		644719	89037312	XM_927815.1	LOC644719	XP_932908.1	ILMN_1781984	0003420064	S	181	ACGCTAACCCGCTGCTCCCAGCCTCCGCTTCCTGTTTTCGAGGGATTAGC	14	+	36195074-36195123		PREDICTED: Homo sapiens hypothetical protein LOC644719 (LOC644719), mRNA.					
Homo sapiens	RefSeq	NR_003199.1	ILMN_184121	SNORD114-7	NR_003199.1	NR_003199.1		767583	115392001	NR_003199.1	SNORD114-7		ILMN_3309458	0000150278	S	22	GGCATATTTAGTCACAGATGATGAATAAATACATGCCTGAGACTCTGAGG	14	+	100499165-100499214	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 114-7 (SNORD114-7), small nucleolar RNA.				14q(II-7)	14q(II-7)
Homo sapiens	RefSeq	XM_930059.1	ILMN_39772	LOC643993	XM_930059.1	XM_930059.1		643993	88942502	XM_930059.1	LOC643993	XP_935152.1	ILMN_1660393	0006420220	S	61	AAAACCAATGAGATGATCAGGGCTAAGAACAGTAATCAGGTTTTCCACAT	1	-	19280103-19280152		PREDICTED: Homo sapiens hypothetical protein LOC643993 (LOC643993), mRNA.					
Homo sapiens	RefSeq	Hs.535903	ILMN_11460	JRK	NM_003724.2	NM_003724.2		8629	117938292	NM_003724.2	JRK	NP_003715.2	ILMN_1839422	0005340689	S	7366	TCTGATGTGTGTGAAAGGAAGGCCTGTCTTCTGGGGTGACCATGAGGCTC	8	-	143742799-143742848	8q24.3e	Homo sapiens jerky homolog (mouse) (JRK), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	DKFZp686C24207; JH8; FLJ45729	
Homo sapiens	RefSeq	NM_003724.1	ILMN_11460	JRK	NM_003724.2	NM_003724.2		8629	117938292	NM_003724.2	JRK	NP_003715.2	ILMN_1661307	0001410368	S	3776	TGGCCGAGTCAGCACGTAGTTTGCATTCCAGCGTCTGCTGTTGATTCCAC	8	-	143743389-143743438	8q24.3e	Homo sapiens jerky homolog (mouse) (JRK), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	DKFZp686C24207; JH8; FLJ45729	DKFZp686C24207; JH8; FLJ45729
Homo sapiens	RefSeq	NM_152843.1	ILMN_7734	HPS4	NM_152841.1	NM_152841.1		89781	23110969	NM_152841.1	HPS4	NP_690054.1	ILMN_1808919	0006280189	A	3861	TGCAGCTCCAGGAAGTCCCCGCAATGTCTCACGTTGTCTTTGACCAGTGG	22	-	26847604-26847653	22q12.1a	Homo sapiens Hermansky-Pudlak syndrome 4 (HPS4), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 12756248] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12756248] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 12663659] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [pmid 12663659] [evidence IDA]; Electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins [goid 42827] [pmid 12756248] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 12663659] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [pmid 12663659] [evidence IDA]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [pmid 11836498] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism [goid 48075] [pmid 11836498] [evidence TAS]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 12663659] [evidence IPI]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12663659] [evidence IPI]	KIAA1667; LE; bK1048E9.4; bK1048E9.5	KIAA1667; LE; bK1048E9.4; bK1048E9.5
Homo sapiens	RefSeq	NM_152841.1	ILMN_7734	HPS4	NM_152841.1	NM_152841.1		89781	23110969	NM_152841.1	HPS4	NP_690054.1	ILMN_2282718	0001430367	I	138	AGCCCTCCTCGGGCTGGGAAACAGGAAGCTGTGTTTTAAATGCCGTGATC	22	-	26875364-26875413	22q12.1a	Homo sapiens Hermansky-Pudlak syndrome 4 (HPS4), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 12756248] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12756248] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 12663659] [evidence IDA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [pmid 12663659] [evidence IDA]; Electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins [goid 42827] [pmid 12756248] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 12663659] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [pmid 12663659] [evidence IDA]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [pmid 11836498] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism [goid 48075] [pmid 11836498] [evidence TAS]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 12663659] [evidence IPI]	Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12663659] [evidence IPI]	KIAA1667; LE; bK1048E9.4; bK1048E9.5	KIAA1667; LE; bK1048E9.4; bK1048E9.5
Homo sapiens	Unigene	Hs.445036	ILMN_92916	HS.445036	Hs.445036		Hs.445036		57999431	CR933609			ILMN_1856861	0006940487	S	8332	AGGAGCAAGATGAGGAGATGGGCAGGTTTTGGTAAGAGCCCCCAGTTCTG	2	-	206567014-206567063		Homo sapiens mRNA; cDNA DKFZp686D22106 (from clone DKFZp686D22106)					
Homo sapiens	RefSeq	NM_152363.4	ILMN_4273	ANKLE1	NM_152363.4	NM_152363.4		126549	168229255	NM_152363.4	ANKLE1	NP_689576.4	ILMN_3243457	0000110301	S	2541	CGGGATCAGGTAGGAGGTCAGCACAAGATAACGGGTCATAAAGAACCTGC	19	+	17397778-17397827	19p13.11e	Homo sapiens ankyrin repeat and LEM domain containing 1 (ANKLE1), mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]			LEM3; FLJ39369	FLJ39369
Homo sapiens	RefSeq	NM_003873.3	ILMN_17483	NRP1	NM_003873.4	NM_003873.4		8829	142355037	NM_003873.4	NRP1	NP_003864.3	ILMN_1699574	0005720424	I	5127	CCTTCCCACATTGCTAGACGTCTCACTCAAAGACATTTGTTGGGAGTCAC	10	-	33507128-33507177	10p11.22a	Homo sapiens neuropilin 1 (NRP1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9288753] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9288753] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9288753] [evidence TAS]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9529250] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9529250] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon outgrowth [goid 30517] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [pmid 9288753] [evidence TAS];  [goid 17154] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA];  [goid 17154] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA];  [goid 17154] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	DKFZp781F1414; VEGF165R; NRP; DKFZp686A03134; CD304	NRP; CD304; DKFZp781F1414; VEGF165R; DKFZp686A03134
Homo sapiens	RefSeq	NM_001004023.1	ILMN_11910	DYRK3	NM_001004023.1	NM_001004023.1		8444	51702241	NM_001004023.1	DYRK3	NP_001004023.1	ILMN_1695807	0004210735	I	288	TCATTTAGAATTTTGCCTCCACCATCCACCAGAAAATGAAGTGGAAAGAG	1	+	204876885-204876919:204876920-204876934	1q32.1h	Homo sapiens dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3 (DYRK3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10779429] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10779429] [evidence IDA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [pmid 10779429] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 10779429] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10779429] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DYRK5; hYAK3-2; RED; REDK	DYRK5; hYAK3-2; RED; REDK
Homo sapiens	RefSeq	NM_001690.2	ILMN_165733	ATP6V1A	NM_001690.2	NM_001690.2		523	19913423	NM_001690.2	ATP6V1A	NP_001681.2	ILMN_1711516	0007050131	S	4302	GATGATGCAGTTCTGTATTTATTGTGCTGTGTCTGGTCCTAAGTGGAGCC	3	+	113530656-113530705	3q13.2b-q13.31a	Homo sapiens ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A (ATP6V1A), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8463241] [evidence TAS]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [pmid 8463241] [evidence TAS]	The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	VA68; Vma1; HO68; ATP6V1A1; VPP2; ATP6A1	VA68; Vma1; HO68; ATP6V1A1; VPP2; ATP6A1
Homo sapiens	RefSeq	NM_005713.1	ILMN_10635	COL4A3BP	NM_005713.1	NM_005713.1		10087	5031716	NM_005713.1	COL4A3BP	NP_005704.1	ILMN_1680109	0004120707	A	2168	GATGGGCACCAGCCTCAGTGTTAAGGGCAGTGGCAAAGCGAGAGTATCCT	5	-	74710992-74711041	5q13.3b	Homo sapiens collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (COL4A3BP), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10212244] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 11007769] [evidence NAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [pmid 10212244] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10212244] [evidence IPI]; Catalysis of the reaction: ATP + Goodpasture antigen-binding protein = ADP + Goodpasture antigen-binding phosphoprotein [goid 33868] [evidence IEA]	GPBP; STARD11; FLJ20597; CERTL; CERT	GPBP; STARD11; FLJ20597; CERTL; CERT
Homo sapiens	RefSeq	NM_005713.1	ILMN_10635	COL4A3BP	NM_005713.1	NM_005713.1		10087	5031716	NM_005713.1	COL4A3BP	NP_005704.1	ILMN_2292123	0002630053	I	1527	TCGCTCTTCCTCCATGTCTTCCATTGATCTAGTCAGTGCCTCTGATGATG	5	-	74730910-74730959	5q13.3b	Homo sapiens collagen, type IV, alpha 3 (Goodpasture antigen) binding protein (COL4A3BP), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10212244] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 11007769] [evidence NAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [pmid 10212244] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10212244] [evidence IPI]; Catalysis of the reaction: ATP + Goodpasture antigen-binding protein = ADP + Goodpasture antigen-binding phosphoprotein [goid 33868] [evidence IEA]	GPBP; STARD11; FLJ20597; CERTL; CERT	GPBP; STARD11; FLJ20597; CERTL; CERT
Homo sapiens	RefSeq	NM_001013627.1	ILMN_24309	NHSL2	NM_001013627.1	NM_001013627.1		340527	61966702	NM_001013627.1	NHSL2	NP_001013649.1	ILMN_1748694	0004590070	I	3857	GTTGCCACCAGCAGCCTCTTTTTGTGCCTTCCGGAGGAAAGGGAGCTCAC	X	+	71277816-71277865	Xq13.1d	Homo sapiens NHS-like 2 (NHSL2), mRNA.				RP11-262D11.5	RP11-262D11.5
Homo sapiens	RefSeq	XM_936425.1	ILMN_24309	NHSL2	NM_001013627.1	NM_001013627.1		340527	61966702	NM_001013627.1	NHSL2	NP_001013649.1	ILMN_1815644	0003990438	A	3427	GAGAGATGAGGGTGAGAATGGAGTGCCAGAGATGGAAGCAGATGCCCCAG	X	+	71277386-71277435	Xq13.1d	Homo sapiens NHS-like 2 (NHSL2), mRNA.				RP11-262D11.5	
Homo sapiens	RefSeq	NM_004765.2	ILMN_14591	BCL7C	NM_004765.2	NM_004765.2		9274	20336476	NM_004765.2	BCL7C	NP_004756.2	ILMN_2371147	0005260196	A	423	AGCAACCAGAGTTTCCATTCGGAAGGTTCCCTGCAAAAGGGCACAGAGCC	16	-	30904010-30904059	16p11.2c	Homo sapiens B-cell CLL/lymphoma 7C (BCL7C), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]			
Homo sapiens	RefSeq	NM_014509.3	ILMN_12639	SERHL2	NM_014509.3	NM_014509.3		253190	25006533	NM_014509.3	SERHL2	NP_055324.2	ILMN_2231299	0005700441	S	894	CATGATAGACACGATGAAATCCACCCTCAAAGAGCAGTTCCAGTTTGTGG	22	+	41298446-41298479:41299886-41299901	22q13.2b	Homo sapiens serine hydrolase-like 2 (SERHL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC149508; dJ222E13.1	dJ222E13.1; MGC149508
Homo sapiens	RefSeq	NM_014509.3	ILMN_12639	SERHL2	NM_014509.3	NM_014509.3		253190	25006533	NM_014509.3	SERHL2	NP_055324.2	ILMN_2231298	0005260064	S	723	TCTGAACAGAGACCAGAGGCTCGCCTGGGCAGAGAACAGCATTGACTTCA	22	+	41292261-41292288:41297071-41297092	22q13.2b	Homo sapiens serine hydrolase-like 2 (SERHL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC149508; dJ222E13.1	dJ222E13.1; MGC149508
Homo sapiens	RefSeq	NM_001076.2	ILMN_5331	UGT2B15	NM_001076.2	NM_001076.2		7366	116517298	NM_001076.2	UGT2B15	NP_001067.2	ILMN_2048414	0002810221	S	481	TCATTCTGGCAGATGCCCTTAATCCCTGTGGTGAGCTACTGGCTGAACTA	4	-	69570584-69570633	4q13.2c	Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide B15 (UGT2B15), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [pmid 7835232] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 7835232] [evidence TAS]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	UGT2B8	UGT2B8
Homo sapiens	RefSeq	NM_018256.2	ILMN_14410	WDR12	NM_018256.2	NM_018256.2		55759	16445423	NM_018256.2	WDR12	NP_060726.2	ILMN_2045729	0002350068	S	1365	GAGTGTAGACTGGACAGACACAGGGCTACTTCTGAGTGGAGGAGCAGACA	2	-	203453880-203453905:203455679-203455702	2q33.1g	Homo sapiens WD repeat domain 12 (WDR12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ12719; FLJ12720; FLJ10881; YTM1	FLJ12719; FLJ12720; FLJ10881; YTM1
Homo sapiens	RefSeq	NM_018256.2	ILMN_14410	WDR12	NM_018256.2	NM_018256.2		55759	16445423	NM_018256.2	WDR12	NP_060726.2	ILMN_1770692	0005270315	S	1183	GATGGTTCTTTGGTGTCGCTGTCCCTAACGTCACATACTGGTTGGGTGAC	2	-	203456660-203456709	2q33.1g	Homo sapiens WD repeat domain 12 (WDR12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ12719; FLJ12720; FLJ10881; YTM1	FLJ12719; FLJ12720; FLJ10881; YTM1
Homo sapiens	RefSeq	NM_014272.2	ILMN_2545	ADAMTS7	NM_014272.2	NM_014272.2		11173	38683826	NM_014272.2	ADAMTS7	NP_055087.2	ILMN_2211790	0003440451	S	4969	TGGTGGTGTCCAGCGGCGCCTGGTCAAGTGTGTCAACACCCAGACAGGGC	15	-	76841895-76841944	15q25.1a	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 7 (ADAMTS7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434H204; ADAM-TS7	DKFZp434H204; ADAM-TS7
Homo sapiens	RefSeq	NM_015911.2	ILMN_16481	ZNF691	NM_015911.2	NM_015911.2		51058	24475961	NM_015911.2	ZNF691	NP_056995.1	ILMN_2045175	0006420241	S	1343	GTGCCCCAACTTTGCTTCTAGATCTCTGGGGTGGGAGGAGTGACCTTCTC	1	+	43090501-43090550	1p34.2a	Homo sapiens zinc finger protein 691 (ZNF691), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp691; RP11-342M1.5	Zfp691; RP11-342M1.5
Homo sapiens	RefSeq	NM_021154.3	ILMN_17460	PSAT1	NM_021154.3	NM_021154.3		29968	34304343	NM_021154.3	PSAT1	NP_066977.1	ILMN_1692938	0004850674	A	1722	GCATTCCATTAGCAAGAGTTGTACCCCCTCCCCAGTCTTCGCCTTCCTCT	9	+	80134501-80134550	9q21.2c	Homo sapiens phosphoserine aminotransferase 1 (PSAT1), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6564] [pmid 10637769] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds [goid 8615] [pmid 10637769] [evidence NAS]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]	Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate [goid 4648] [pmid 10637769] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MGC1460; PSA; EPIP; PSAT	MGC1460; PSA; EPIP; PSAT
Homo sapiens	RefSeq	NM_144564.4	ILMN_27676	SLC39A3	NM_144564.4	NM_144564.4		29985	47080101	NM_144564.4	SLC39A3	NP_653165.2	ILMN_2234970	0004560671	I	1342	AGGCTGTGCCCCCGATCCTACACCCTGAGCCTCAGAGCACTGCTACTTTT	19	-	2732556-2732605	19p13.3g	Homo sapiens solute carrier family 39 (zinc transporter), member 3 (SLC39A3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	ZIP3	ZIP3
Homo sapiens	RefSeq	NM_144564.4	ILMN_27676	SLC39A3	NM_144564.4	NM_144564.4		29985	47080101	NM_144564.4	SLC39A3	NP_653165.2	ILMN_1710543	0003890167	A	322	CCCTGCTCCCCGTGAAGATCATCGAGACAGATTTTGAGAAGGCCCATCGC	19	-	2737138-2737187	19p13.3g	Homo sapiens solute carrier family 39 (zinc transporter), member 3 (SLC39A3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	ZIP3	ZIP3
Homo sapiens	RefSeq	NM_017518.5	ILMN_27285	UCHL5IP	NM_017518.5	NM_017518.5		55559	66346716	NM_017518.5	UCHL5IP	NP_059988.3	ILMN_2371700	0001090370	A	1215	GATCGAGTTGGCCGAGGATGGATGATTGTGGCAGCAGAAGCCGTTGCAGC	X	-	152366416-152366465	Xq28f	Homo sapiens UCHL5 interacting protein (UCHL5IP), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 16395595] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [pmid 11163772] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [pmid 11163772] [evidence NAS]	Interacting selectively with any thioesterase enzyme [goid 31996] [pmid 11163772] [evidence IPI]	HSXQ28ORF; UIP1	HSXQ28ORF; UIP1
Homo sapiens	RefSeq	NM_178135.2	ILMN_164703	HSD17B13	NM_178135.2	NM_178135.2		345275	31342377	NM_178135.2	HSD17B13	NP_835236.1	ILMN_2204576	0001450646	S	2165	CCGACTCCCACTACATCAAGACTAATCTTGTTTTGTGTGTTTTTCACATG	4	-	88444127-88444176	4q22.1a	Homo sapiens hydroxysteroid (17-beta) dehydrogenase 13 (HSD17B13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	SCDR9; MGC138508; HMFN0376; NIIL497; MGC138510	SCDR9; HMFN0376; NIIL497; MGC138508; MGC138510
Homo sapiens	RefSeq	NM_178135.2	ILMN_164703	HSD17B13	NM_178135.2	NM_178135.2		345275	31342377	NM_178135.2	HSD17B13	NP_835236.1	ILMN_1683844	0004070722	S	1452	CCTAGCCTCTTCCTTTTTCATTAGCCCAAAACGGTGCAACTCTATTCTGG	4	-	88444840-88444889	4q22.1a	Homo sapiens hydroxysteroid (17-beta) dehydrogenase 13 (HSD17B13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	SCDR9; MGC138508; HMFN0376; NIIL497; MGC138510	SCDR9; HMFN0376; NIIL497; MGC138508; MGC138510
Homo sapiens	RefSeq	NM_001001888.1	ILMN_172740	VCX-C	NM_001001888.1	NM_001001888.1		425054	49619240	NM_001001888.1	VCX-C	NP_001001888.1	ILMN_2166716	0005570181	S	874	GGTGGAGGAACCACTGAGTCAGGAGAGCGAGATGGAAGAACCACTGAGTC	X	+	8394340-8394389	Xp22.31b	Homo sapiens variably charged X-C (VCX-C), mRNA.				MGC119815	MGC119815
Homo sapiens	RefSeq	NR_003131.1	ILMN_182311	LOC388955	NR_003131.1	NR_003131.1		388955	112734772	NR_003131.1	LOC388955		ILMN_2163315	0005090600	S	665	GACTATGAAGGGTTTTGAATATATCTTGACTAAGCTGCAAGGCGAGGCCC	2	-	63849445-63849494	2p15a	Homo sapiens PX19 protein pseudogene (LOC388955), non-coding RNA.					
Homo sapiens	RefSeq	NM_001040704.1	ILMN_165994	DEFB106B	NM_001040704.1	NM_001040704.1		503841	103485142	NM_001040704.1	DEFB106B	NP_001035794.1	ILMN_2044081	0003850047	S	121	AAAATGAAGAACTTATTGCTCTCTGCCAGAAGTCTCTGAAATGCTGTCGG	8	-	7340158-7340207	8p23.1e	Homo sapiens defensin, beta 106B (DEFB106B), mRNA.					
Homo sapiens	RefSeq	XR_040322.1	ILMN_337123	LOC645231	XR_040322.1	XR_040322.1		645231	169163573	XR_040322.1	LOC645231		ILMN_3201663	0003060408	A	1389	GGATGCTGCCAATTTTGAGCAGTTTTTGCAAGAAAGGATCAAAGTGAACG	2	+	110826666-110826715	2q13b	PREDICTED: Homo sapiens misc_RNA (LOC645231), miscRNA.					
Homo sapiens	RefSeq	XR_040322.1	ILMN_337123	LOC645231	XR_040322.1	XR_040322.1		645231	169163573	XR_040322.1	LOC645231		ILMN_3278146	0000050148	M	1618	AAATTACGTTCCTTCCAAATTAACCAGGACGAAGAAGAGGAGGAAGACGA	2	+	110826895-110826944	2q13b	PREDICTED: Homo sapiens misc_RNA (LOC645231), miscRNA.					
Homo sapiens	RefSeq	NM_005487.3	ILMN_16407	HMGXB4	NM_005487.3	NM_005487.3		10042	51173869	NM_005487.3	HMGXB4	NP_005478.2	ILMN_3181420	0006400722	A	3625	CCCCACCAGTGTTGTCACAGGGCTATGTTGCTTAAAGGTAGTCTGGCTGC	22	+	34021218-34021267	22q12.3c	Homo sapiens HMG box domain containing 4 (HMGXB4), transcript variant 1, mRNA.				THC211630; HMGBCG	THC211630; HMGBCG
Homo sapiens	RefSeq	NM_005487.3	ILMN_16407	HMGXB4	NM_005487.3	NM_005487.3		10042	51173869	NM_005487.3	HMGXB4	NP_005478.2	ILMN_3257884	0002750100	M	3538	CCTGGCCCTGACAGAGCACTACAGCATCAAAGTAAATCTTTGGGGACAGT	22	+	34021131-34021180	22q12.3c	Homo sapiens HMG box domain containing 4 (HMGXB4), transcript variant 1, mRNA.				THC211630; HMGBCG	THC211630; HMGBCG
Homo sapiens	RefSeq	NM_005487.3	ILMN_16407	HMGXB4	NM_005487.3	NM_005487.3		10042	51173869	NM_005487.3	HMGXB4	NP_005478.2	ILMN_1758333	0000070576	A	3840	CACAGGGTATCTAGGAGGGGCGGGGAAGACATGGATAGTATAGGAAGACA	22	+	34021433-34021482	22q12.3c	Homo sapiens HMG box domain containing 4 (HMGXB4), transcript variant 1, mRNA.				THC211630; HMGBCG	THC211630; HMGBCG
Homo sapiens	RefSeq	NM_022908.1	ILMN_20328	NT5DC2	NM_022908.1	NM_022908.1		64943	12597652	NM_022908.1	NT5DC2	NP_075059.1	ILMN_1708743	0006840301	S	1798	GTGCGCTTCTCTGACCTCTACATGGCCTCCCTCAGCTGCCTGCTCAACTA	3	-	52533652-52533701	3p21.1d	Homo sapiens 5'-nucleotidase domain containing 2 (NT5DC2), mRNA.			Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ12442	FLJ12442
Homo sapiens	RefSeq	NM_197955.1	ILMN_12680	C15ORF48	NM_197955.1	NM_197955.1		84419	37694066	NM_197955.1	C15orf48	NP_922946.1	ILMN_2389064	0006860397	A	14	TATATATAAGGTGGGGAGGCCGCCGGCCCGTTCGGTTCCGGGCGTTACCA	15	+	43510068-43510117	15q21.1a	Homo sapiens chromosome 15 open reading frame 48 (C15orf48), transcript variant 1, mRNA.				FLJ22645; MGC32925; NMES1; FOAP-11	FLJ22645; MGC32925; NMES1; FOAP-11
Homo sapiens	RefSeq	XR_001382.1	ILMN_35790	LOC554206	XR_001382.1	XR_001382.1		554206	89040737	XR_001382.1	LOC554206		ILMN_1690036	0002570397	S	837	AATGGAGAGCTTACTTTGTGCCAGGGCCTTATTTGGGCTGGTTGGTGGGG				16p12.1b	PREDICTED: Homo sapiens hypothetical LOC554206 (LOC554206), misc RNA.					
Homo sapiens	RefSeq	NM_019062.1	ILMN_20153	RNF186	NM_019062.1	NM_019062.1		54546	9506662	NM_019062.1	RNF186	NP_061935.1	ILMN_1811278	0004900242	S	935	AGGGGTTACGGACTAAGACTGGCTCCTTTGGGAAATCACATGCCAGCGGG	1	-	20140787-20140836	1p36.13a	Homo sapiens ring finger protein 186 (RNF186), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20225; RP11-91K11.1	FLJ20225; RP11-91K11.1
Homo sapiens	RefSeq	NM_001077702.1	ILMN_175660	MIER1	NM_001077702.1	NM_001077702.1		57708	118130798	NM_001077702.1	MIER1	NP_001071170.1	ILMN_2334322	0004250669	A	1441	CCCCAACTGCATCAAACAGTAGTAACAGCCAGTCTGAGAAAGAAGATGGC	1	+	67220117-67220166	1p31.3a	Homo sapiens mesoderm induction early response 1 homolog (Xenopus laevis) (MIER1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	MGC150640; KIAA1610; MGC131940; ER1; MI-ER1; DKFZp781G0451; RP5-944N15.1; MGC150641; hMI-ER1	KIAA1610; MGC131940; MI-ER1; RP5-944N15.1; MGC150640; ER1; DKFZp781G0451; MGC150641; hMI-ER1
Homo sapiens	Unigene	Hs.131802	ILMN_77226	HS.131802	Hs.131802		Hs.131802		2824581	AA773010			ILMN_1888224	0002480553	S	73	GCTCCTCCCTGGTTGTGGAGTGGGGTTCAGGAGAGTTCCTCCTACACAGA	16	-	47040607-47040656		ac48c09.s1 Stratagene hNT neuron (#937233) Homo sapiens cDNA clone IMAGE:859696 3 similar to contains Alu repetitive element;contains element MER22 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_001015056.1	ILMN_25437	RTKN	NM_001015056.1	NM_001015056.1		6242	62739180	NM_001015056.1	RTKN	NP_001015056.1	ILMN_2392818	0005080048	A	1657	TGGGGGAGACCCCGAACCTTTTCCCTGGATGCTGTCCCCCCAGACCACTC	2	-	74653475-74653524	2p13.1b	Homo sapiens rhotekin (RTKN), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10940294] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 15480428] [evidence IDA]; Any process that modulates the frequency, rate or extent of anti-apoptosis [goid 45767] [pmid 15480428] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [pmid 10940294] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16007136] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10940294] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with the GTP-bound form of the Rho protein [goid 17049] [pmid 10940294] [evidence IDA]		
Homo sapiens	RefSeq	XM_927198.1	ILMN_31054	LOC643007	XM_938089.2	XM_938089.2		643007	113425545	XM_938089.2	LOC643007	XP_943182.1	ILMN_1724295	0007650220	S	642	AGAGAAAGGGCCAAGTGATTCAGTTCTAAGTGTCATCTTTTATTATGAAG				15q14a	PREDICTED: Homo sapiens similar to large subunit ribosomal protein L36a (LOC643007), mRNA.					
Homo sapiens	Unigene	Hs.567192	ILMN_119382	HS.567192	Hs.567192		Hs.567192		6657577	AW270547			ILMN_1911846	0007560397	S	183	AGAAGGGCTAGAAGTAGAAGGTCTGGATCATACGGTGGTGTGTGTTTAAC	X	+	27009398-27009422:27009467-27009479:108530030-108530041		xp82e07.x1 NCI_CGAP_Ov40 Homo sapiens cDNA clone IMAGE:2746884 3 similar to contains element MER12 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_032180.2	ILMN_366404	FAM161A	NM_032180.2	NM_032180.2		84140	187936945	NM_032180.2	FAM161A	NP_115556.2	ILMN_3238106	0007610014	S	3178	GGGCAAGTCTCCAAAGTAATTCAGATTTAACTCTTCACTGCTAGACCCAG	2	-	62052447-62052496	2p15c	Homo sapiens family with sequence similarity 161, member A (FAM161A), mRNA. XM_934538 XM_934541 XM_934544 XM_942148 XM_945748 XM_945749 XM_945750 XM_945751 XM_945752 XM_945754 XM_945756					
Homo sapiens	Unigene	Hs.567104	ILMN_119304	HS.567104	Hs.567104		Hs.567104		4691102	AI638868			ILMN_1878326	0003830187	S	401	GGAGAAGGTCAGAGGGAAACTTGGCTTCTGGGGCCTTCAGTCTCCTTTAG					tt08c07.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2240172 3 similar to contains MER39.t1 MER39 MER39 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	XM_001726773.1	ILMN_351808	LOC100130825	XM_001726773.1	XM_001726773.1		100130825	169205543	XM_001726773.1	LOC100130825	XP_001726825.1	ILMN_3272576	0003190736	M	120	TTTCCTCCCATCAGATGATGCCCAGCCTGGGAAGGCACTGAGACCGCAGC				12q24.33c	PREDICTED: Homo sapiens hypothetical protein LOC100130825 (LOC100130825), mRNA.					
Homo sapiens	RefSeq	NM_000847.3	ILMN_183204	GSTA3	NM_000847.3	NM_000847.3		2940	24430143	NM_000847.3	GSTA3	NP_000838.3	ILMN_2227817	0006020050	S	681	GCAGCCCAAGGAAGCCTCCCGCAGATGCAAAAGCTTTAGAAGAAGCCAGA	6	-	52869580-52869629	6p12.1d	Homo sapiens glutathione S-transferase A3 (GSTA3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 9480897] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GSTA3-3; GTA3; MGC22232	GSTA3-3; GTA3; MGC22232
Homo sapiens	Unigene	Hs.571125	ILMN_123306	HS.571125	Hs.571125		Hs.571125		15745142	BI753564			ILMN_1895313	0004290670	S	510	GCCAGAGAGGCCCATCCCAGAGCCATCTCATCATCTCTCCTCAGACAGGA	6	-	19646653-19646678:19646993-19647016		603028630F1 NIH_MGC_114 Homo sapiens cDNA clone IMAGE:5199103 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001965.1	ILMN_172840	EGR4	NM_001965.1	NM_001965.1		1961	4503494	NM_001965.1	EGR4	NP_001956.1	ILMN_1764052	0004610072	S	1911	TTTGTAACTGCACACGCCCCACGCCTTCCTCTATAACCCCCAGAGACAGG	2	-	73371758-73371807	2p13.2a	Homo sapiens early growth response 4 (EGR4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 1658795] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1584812] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NGFI-C; NGFIC; PAT133	NGFI-C; NGFIC; PAT133
Homo sapiens	RefSeq	NR_030411.1	ILMN_387781	MIR454	NR_030411.1	NR_030411.1		768216	262205121	NR_030411.1	MIR454		ILMN_3308926	0007510630	S	65	GTGCAATATTGCTTATAGGGTTTTGGTGTTTGGAAAGAACAATGGGCAGG				17q22d	Homo sapiens microRNA 454 (MIR454), microRNA.					
Homo sapiens	Unigene	Hs.199565	ILMN_81517	HS.199565	Hs.199565		Hs.199565		4511397	AI561056			ILMN_1847461	0002060619	S	225	CCATACCCAGGCACACTCCAGTCTGTGAAAAGGAAGCAAGAGAGGCAGGC	16	-	18412826-18412875		tq29f09.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2210249 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001133555.1	ILMN_171016	LOC729130	XM_001133555.1	XM_001133555.1		729130	113411432	XM_001133555.1	LOC729130	XP_001133555.1	ILMN_3248727	0005130086	S	272	GCTACTCCAGAGCAATAACTTTGACCACTATATGGAGCAGCACTACTGCG	1	-	147967596-147967645	1q21.1e	PREDICTED: Homo sapiens hypothetical LOC729130 (LOC729130), mRNA.					
Homo sapiens	RefSeq	NM_020229.2	ILMN_14492	PRDM11	NM_020229.2	NM_020229.2		56981	41349465	NM_020229.2	PRDM11	NP_064614.2	ILMN_1765218	0004040468	S	2038	CTAAACCCAGTCTTTCTCTGTCCCCAGTCTCAAGCAGGGTGTCCCACTGG	11	+	45202943-45202992	11p11.2d	Homo sapiens PR domain containing 11 (PRDM11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			PFM8	PFM8
Homo sapiens	RefSeq	XM_931281.1	ILMN_38274	LOC643072	XM_931281.2	XM_931281.2		643072	113413308	XM_931281.2	LOC643072	XP_936374.1	ILMN_1682505	0004890373	S	1	ATGCAGGAAACTATTATAGCTGGCCTAACTTACCAATACCACCTAAATAC	2	+	160173927-160173976	2q24.2a	PREDICTED: Homo sapiens hypothetical LOC643072 (LOC643072), mRNA.					
Homo sapiens	RefSeq	NM_001005365.2	ILMN_2229	POTEA	NM_001005365.2	NM_001005365.2		340441	53828702	NM_001005365.2	POTEA	NP_001005365.2	ILMN_2321282	0000060091	A	1574	GCTCCTCAGAAAGGTGAATGTGAGCAAGAACGCTACAGTTCGAGTGAAGA	8	+	43212072-43212115:43216186-43216191	8p11.1b	Homo sapiens POTE ankyrin domain family, member A (POTEA), transcript variant 2, mRNA.				POTE8; POTE-8	POTE8; POTE-8
Homo sapiens	RefSeq	NM_001005365.2	ILMN_2229	POTEA	NM_001005365.2	NM_001005365.2		340441	53828702	NM_001005365.2	POTEA	NP_001005365.2	ILMN_3225545	0002100414	A	1927	ATTGAATGAGGAAGCACTAACAAAAGCAGTAGTTCAGTACAGTGGACAGC	8	+	43218279-43218328	8p11.1b	Homo sapiens POTE ankyrin domain family, member A (POTEA), transcript variant 2, mRNA.				POTE8; POTE-8	POTE8; POTE-8
Homo sapiens	RefSeq	NM_000544.3	ILMN_166212	TAP2	NM_000544.3	NM_000544.3		6891	73747914	NM_000544.3	TAP2	NP_000535.3	ILMN_1777565	0003940477	I	5257	ACTTGCCTGGGTCACATAGCTAAGGAAGAGGTGGACTTGCCCAGCTTTGC	6	-	32901537-32901586	6p21.32a	Homo sapiens transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) (TAP2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 11133832] [evidence IMP]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11133832] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1946428] [evidence NAS]; A heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). Functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum [goid 42825] [pmid 12202157] [evidence NAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence ISS]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence ISS]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 12047747] [evidence NAS]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 11133832] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [pmid 11532960] [evidence NAS]; The directed movement of substances from the cytosol to the endoplasmic reticulum of a cell [goid 46967] [pmid 11133832] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules [goid 46980] [evidence ISS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules [goid 46980] [evidence ISS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: 2-hydroxybutane-1,2,4-tricarboxylate = but-1-ene-1,2,4-tricarboxylate + H2O [goid 4409] [pmid 1946428] [evidence NAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10835348] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12047747] [evidence NAS]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate [goid 15433] [pmid 12047747] [evidence NAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 12047747] [evidence NAS]; Interacting selectively with phosphate [goid 42301] [pmid 11532960] [evidence NAS]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [pmid 11133832] [evidence NAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules [goid 46980] [pmid 12047747] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11133832] [evidence IPI]	APT2; RING11; PSF2; ABC18; ABCB3; D6S217E	APT2; RING11; PSF2; ABC18; ABCB3; D6S217E
Homo sapiens	RefSeq	NM_018161.4	ILMN_22444	NADSYN1	NM_018161.4	NM_018161.4		55191	41393550	NM_018161.4	NADSYN1	NP_060631.2	ILMN_1779034	0003370575	S	2179	CGGTGCATAGAAAATCAGGTGCTACAGCTCGAGAGGGCAGAGCCACAGTC	11	+	70887205-70887222:70889996-70890027	11q13.4a	Homo sapiens NAD synthetase 1 (NADSYN1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12547821] [evidence EXP]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + deamido-NAD+ + L-glutamine + H2O = AMP + diphosphate + NAD+ + L-glutamate [goid 3952] [evidence IEA]; Catalysis of the reaction: ATP + deamido-NAD+ + L-glutamine + H2O = AMP + diphosphate + NAD+ + L-glutamate [goid 3952] [pmid 12547821] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ36703; FLJ40627; FLJ10631	FLJ36703; FLJ40627; FLJ10631
Homo sapiens	RefSeq	NM_198491.1	ILMN_9650	FAM92B	NM_198491.1	NM_198491.1		339145	38348293	NM_198491.1	FAM92B	NP_940893.1	ILMN_1693071	0005960673	S	1664	GGCACTGGGGCAGGGACCCCATAAGAGAGAACTGCCCACAACAGTCAGAA	16	-	85132148-85132197	16q24.1b	Homo sapiens family with sequence similarity 92, member B (FAM92B), mRNA.				MGC138149; FLJ44299	MGC138149; FLJ44299
Homo sapiens	RefSeq	NM_004600.3	ILMN_4319	TROVE2	NM_004600.4	NM_004600.4		6738	108796059	NM_004600.4	TROVE2	NP_004591.2	ILMN_1738909	0003610470	S	2682	GAAACATCATGGCAACCCCTAAGAATAGACTAAGTTTGTGTTGGCTGAGG	1	+	191321132-191321181	1q31.2b	Homo sapiens TROVE domain family, member 2 (TROVE2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [pmid 3200833] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 3200833] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate [goid 4618] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 3200833] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	SSA2; RO60	SSA2
Homo sapiens	RefSeq	NM_197965.1	ILMN_18314	SLC10A6	NM_197965.1	NM_197965.1		345274	37537551	NM_197965.1	SLC10A6	NP_932069.1	ILMN_1792933	0000240593	S	1026	TGCCTTCTTGGAGGTGAATGAAGAAGGTGCCATCACTCCTGGGCCACCAG	4	-	87963923-87963972	4q21.3d-q21.3e	Homo sapiens solute carrier family 10 (sodium/bile acid cotransporter family), member 6 (SLC10A6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SOAT; MGC129576; MGC129575	SOAT; MGC129576; MGC129575
Homo sapiens	RefSeq	NM_016050.2	ILMN_1149	MRPL11	NM_016050.2	NM_016050.2		65003	25306269	NM_016050.2	MRPL11	NP_057134.1	ILMN_2316540	0004670424	A	455	CAGGATGAGGCATTTGCCCTGCAGGATGTACCCCTGTCGTCTGTTGTCCG	11	-	65961198-65961247	11q13.1e	Homo sapiens mitochondrial ribosomal protein L11 (MRPL11), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11543634] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11543634] [evidence NAS]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [pmid 11543634] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC111024; L11mt; CGI-113	MGC111024; L11mt; CGI-113
Homo sapiens	RefSeq	XM_001726072.1	ILMN_344500	LOC100129201	XM_001726072.1	XM_001726072.1		100129201	169203608	XM_001726072.1	LOC100129201	XP_001726124.1	ILMN_3263918	0006330750	M	118	CCTGTGAATCTCTTGGCTCCTGGCATGGTCAGACCAGCAGTGACAGCGGA				11q23.3b	PREDICTED: Homo sapiens hypothetical protein LOC100129201 (LOC100129201), mRNA.					
Homo sapiens	RefSeq	NR_030622.1	ILMN_388152	MIR301B	NR_030622.1	NR_030622.1		100126318	262206174	NR_030622.1	MIR301B		ILMN_3309579	0004570072	S	7	GTGCTCTGACGAGGTTGCACTACTGTGCTCTGAGAAGCAGTGCAATGATA				22q11.21f	Homo sapiens microRNA 301b (MIR301B), microRNA.					
Homo sapiens	RefSeq	NM_005468.2	ILMN_163095	NAALADL1	NM_005468.2	NM_005468.2		10004	57232739	NM_005468.2	NAALADL1	NP_005459.2	ILMN_1770963	0004120626	S	2527	TCAGATGCCAACTCAGGTCATCAAGGCCAAGGACCAGTGGCGAAAGTGAG	11	-	64812405-64812454	11q13.1c	Homo sapiens N-acetylated alpha-linked acidic dipeptidase-like 1 (NAALADL1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9388249] [evidence NAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 9388249] [evidence NAS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	I100; NAALADASEL	I100; NAALADASEL
Homo sapiens	RefSeq	XR_015424.1	ILMN_165000	LOC727938	XR_015424.1	XR_015424.1		727938	113417160	XR_015424.1	LOC727938		ILMN_3274465	0006520554	M	585	GACCGGGTTAGGAGTTAGACAGTTTAAAAGGGGGATATGGGGCCCTGAAG				5q15d	PREDICTED: Homo sapiens misc_RNA (LOC727938), miscRNA.					
Homo sapiens	RefSeq	XM_930024.1	ILMN_178213	SNORA7B	NR_002992.2	NR_002992.2		677797	95007008	NR_002992.2	SNORA7B		ILMN_1660900	0007570110	A	87	TCCATTCCCAGCTTGCTCCGTAGCTGGTGATTGGAAGACACTCTGCGACA	3	-	130598745-130598794	3q21.3d	Homo sapiens small nucleolar RNA, H/ACA box 7B (SNORA7B), small nucleolar RNA.				ACA7B	
Homo sapiens	RefSeq	XM_497913.2	ILMN_34506	LOC344875	XM_497913.2	XM_497913.2		344875	88961507	XM_497913.2	LOC344875	XP_497913.2	ILMN_1759302	0003420224	A	3822	CCCTGCCTTCTTCAACAATGTCCCTGACACTGACCGGGGTCTTCTGACTC	3	-	15172093-15172142	3p24.3e	PREDICTED: Homo sapiens similar to alpha 3 type VI collagen isoform 1 precursor (LOC344875), mRNA.					
Homo sapiens	RefSeq	XM_936599.1	ILMN_30830	LOC647544	XM_936599.1	XM_936599.1		647544	88950404	XM_936599.1	LOC647544	XP_941692.1	ILMN_1683367	0001780390	S	602	CCTCTTTCAGCGGGAAAAATGGGCAGAGAGGAGCCCCGAGCCTTACAACA					PREDICTED: Homo sapiens hypothetical protein LOC647544 (LOC647544), mRNA.					
Homo sapiens	RefSeq	NM_006156.1	ILMN_21274	NEDD8	NM_006156.1	NM_006156.1		4738	5453759	NM_006156.1	NEDD8	NP_006147.1	ILMN_2058070	0004120307	S	513	GGGCCTTGCTGGCTACTGGGTGTTAGTTTGCAGTCCTGTGTGCTTCCCTC	14	-	23755955-23756004	14q12a	Homo sapiens neural precursor cell expressed, developmentally down-regulated 8 (NEDD8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9353319] [evidence TAS]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9694792] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9694792] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9353319] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9694792] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15567417] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	Nedd-8; MGC125896; MGC104393; MGC125897	Nedd-8; MGC125896; MGC104393; MGC125897
Homo sapiens	RefSeq	NM_015481.1	ILMN_27544	ZNF385A	NM_015481.1	NM_015481.1		25946	24308078	NM_015481.1	ZNF385A	NP_056296.1	ILMN_1786722	0000020170	S	2114	AGTCTGTAGCCTCCCCGATCCAAGTTCCTAGACCTCATGGCTGTCCCCTC	12	-	54763160-54763209	12q13.13f	Homo sapiens zinc finger protein 385A (ZNF385A), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17719541] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP586G1122; RZF; HZF; ZFP385; ZNF385	DKFZP586G1122; RZF; HZF; ZFP385; ZNF385
Homo sapiens	RefSeq	NM_181721.2	ILMN_27801	FOXR1	NM_181721.2	NM_181721.2		283150	61743928	NM_181721.2	FOXR1	NP_859072.1	ILMN_2298171	0001980678	I	1105	CCCCAAGAAGCAACAGCCAGCTAATGCTTTATTAAAATTACCCTCACTAA	11	+	118357157-118357205:118842417-118842417	11q23.3e	Homo sapiens forkhead box R1 (FOXR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FOXN5; MGC149486; DLNB13	FOXN5; MGC149486; DLNB13
Homo sapiens	RefSeq	NM_181721.2	ILMN_27801	FOXR1	NM_181721.2	NM_181721.2		283150	61743928	NM_181721.2	FOXR1	NP_859072.1	ILMN_1685779	0002970270	I	181	TGGGCCCGCCTCCATGGCCAGGTCCCGGGACTGCTGGACTGGGACATGGG	11	+	118347807-118347851:118347852-118347856	11q23.3e	Homo sapiens forkhead box R1 (FOXR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FOXN5; MGC149486; DLNB13	FOXN5; MGC149486; DLNB13
Homo sapiens	RefSeq	NM_181721.2	ILMN_27801	FOXR1	NM_181721.2	NM_181721.2		283150	61743928	NM_181721.2	FOXR1	NP_859072.1	ILMN_1707985	0002650338	A	855	CCGGACGGCCCCGGAAGGCTGGAAGAATACTGTCCGTCACAATCTCTGTT	11	+	118356428-118356477	11q23.3e	Homo sapiens forkhead box R1 (FOXR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FOXN5; MGC149486; DLNB13	FOXN5; MGC149486; DLNB13
Homo sapiens	RefSeq	XM_941378.1	ILMN_27801	FOXR1	NM_181721.2	NM_181721.2		283150	61743928	NM_181721.2	FOXR1	NP_859072.1	ILMN_1770460	0005490022	A	854	TCCGGACGGCCCCGGAAGGCTGGAAGAATACTGTCCGTCACAATCTCTGT	11	+	118356427-118356476	11q23.3e	Homo sapiens forkhead box R1 (FOXR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FOXN5; MGC149486; DLNB13	
Homo sapiens	RefSeq	NM_025004.1	ILMN_4688	CCDC15	NM_025004.1	NM_025004.1		80071	13376518	NM_025004.1	CCDC15	NP_079280.1	ILMN_1783676	0006110095	S	2493	CAGGATTGAGCACTGAATTCCAAGCTCCACTGGCATTTCAGTCTGACGTG	11	+	124378992-124379041	11q24.2a	Homo sapiens coiled-coil domain containing 15 (CCDC15), mRNA.				FLJ13215	FLJ13215
Homo sapiens	RefSeq	NM_032053.1	ILMN_11339	PCDHGA4	NM_032053.1	NM_032053.1		56111	14196467	NM_032053.1	PCDHGA4	NP_114442.1	ILMN_1717168	0003850717	I	2431	TCTTATAATAGATCATACCACACTGAAATATAGACAAAGAGTTGTGTAAA	5	+	140717382-140717414:140717415-140717431	5q31.3c	Homo sapiens protocadherin gamma subfamily A, 4 (PCDHGA4), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-A4	PCDH-GAMMA-A4
Homo sapiens	RefSeq	XR_001498.1	ILMN_138191	TNCRNA	XR_001498.1	XR_001498.1		283131	89034061	XR_001498.1	TncRNA		ILMN_1675354	0006200193	A	20371	AGGCCAGAGCTTTGTTGCTTCATCGGCAGGTTGGGACTTAGATGGCCGTG	11	+	64968034-64968083	11q13.1c	PREDICTED: Homo sapiens trophoblast-derived noncoding RNA (TncRNA), misc RNA.					
Homo sapiens	RefSeq	NM_178431.1	ILMN_180125	LCE3A	NM_178431.1	NM_178431.1		353142	30410038	NM_178431.1	LCE3A	NP_848518.1	ILMN_1756522	0001660414	S	213	AAGTGGTCAGCAAGGCGGGAGCTCCAGCTGTGGCCACAGTTCTGCGGGCT	1	-	152595317-152595366	1q21.3b	Homo sapiens late cornified envelope 3A (LCE3A), mRNA.		The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [evidence IEA]	LEP13	LEP13
Homo sapiens	RefSeq	NM_001464.3	ILMN_18772	ADAM2	NM_001464.3	NM_001464.3		2515	55743079	NM_001464.3	ADAM2	NP_001455.3	ILMN_1662675	0006110315	S	2530	ACGCTATTTCTGTTGGTTAGTAGACACTAATTCTGTCAGTAGGGGCATGG	8	-	39720474-39720523	8p11.22a	Homo sapiens ADAM metallopeptidase domain 2 (ADAM2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9041139] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [pmid 9041139] [evidence TAS]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 9041139] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	PH30; CRYN1; FTNB; CRYN2; PH-30b	PH30; CRYN1; FTNB; CRYN2; PH-30b
Homo sapiens	RefSeq	NM_004083.4	ILMN_16748	DDIT3	NM_004083.4	NM_004083.4		1649	50345277	NM_004083.4	DDIT3	NP_004074.2	ILMN_1676984	0000830619	S	473	ACCAAGGGAGAACCAGGAAACGGAAACAGAGTGGTCATTCCCCAGCCCGG	12	-	57910759-57910808	12q13.3b	Homo sapiens DNA-damage-inducible transcript 3 (DDIT3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7503811] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 1339368] [evidence TAS]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IEA]; The synthesis of messenger RNA (mRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II-specific promoter [goid 42789] [pmid 14667815] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [pmid 14667815] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8510758] [evidence NAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 7503811] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC4154; CEBPZ; CHOP10; CHOP; GADD153	MGC4154; CEBPZ; CHOP10; CHOP; GADD153
Homo sapiens	RefSeq	NM_020901.1	ILMN_22314	PHRF1	NM_020901.1	NM_020901.1		57661	55741656	NM_020901.1	PHRF1	NP_065952.1	ILMN_1766593	0000430491	S	4995	TACGTGGACAAGTACAGGCACATGCGCAGGCACAAGAAACCAGAGGCCGG	11	+	601694-601743	11p15.5d	Homo sapiens PHD and ring finger domains 1 (PHRF1), mRNA.					
Homo sapiens	RefSeq	NM_020901.1	ILMN_22314	PHRF1	NM_020901.1	NM_020901.1		57661	55741656	NM_020901.1	PHRF1	NP_065952.1	ILMN_3245476	0001340047	S	5232	TCGGGTTCCTGCGCTGACACCTGGTCTGTGCACCTGTGTTGCTCACAGTT	11	+	601931-601980	11p15.5d	Homo sapiens PHD and ring finger domains 1 (PHRF1), mRNA.					
Homo sapiens	RefSeq	NR_030635.1	ILMN_388200	MIR939	NR_030635.1	NR_030635.1		100126351	262206237	NR_030635.1	MIR939		ILMN_3310371	0005390142	S	27	CTCTGGGGGTGGCCGGGGCTGACCCTGGGCCTCTGCTCCCCAGTGTCTGA				8q24.3h	Homo sapiens microRNA 939 (MIR939), microRNA.					
Homo sapiens	RefSeq	NM_020808.1	ILMN_167573	SIPA1L2	NM_020808.3	NM_020808.3		57568	112421012	NM_020808.3	SIPA1L2	NP_065859.3	ILMN_1732923	0003460053	S	6339	TCAGACCGAGAAGCAGGGTGAGAGATTCTAACGACTGGATGCTGCTAGTA	1	-	232533811-232533860	1q42.2b	Homo sapiens signal-induced proliferation-associated 1 like 2 (SIPA1L2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SPAL2; FLJ23126; KIAA1389; FLJ23632	SPAL2; KIAA1389
Homo sapiens	RefSeq	XM_001726592.1	ILMN_341469	LOC100131487	XM_001726592.1	XM_001726592.1		100131487	169202069	XM_001726592.1	LOC100131487	XP_001726644.1	ILMN_3206986	0007160367	A	1	TTAGAGACAAAGACAGAGACAGCAAATCAGCCCAAAGAACAGACATAAAC	11	+	128311964-128312013	11q24.3a	PREDICTED: Homo sapiens hypothetical protein LOC100131487 (LOC100131487), mRNA.					
Homo sapiens	RefSeq	NR_024011.1	ILMN_364020	LOC286367	NR_024011.1	NR_024011.1		286367	193290111	NR_024011.1	LOC286367		ILMN_3236656	0007040349	S	3250	GGTCATGAACCACCCAGAGTGTGTACAAGGCTCCTGCCAGAAGAAATGCC	9	+	107539882-107539931		Homo sapiens FP944 (LOC286367), non-coding RNA.					
Homo sapiens	RefSeq	NM_001006634.1	ILMN_16990	ARHGAP17	NM_001006634.1	NM_001006634.1		55114	54860078	NM_001006634.1	ARHGAP17	NP_001006635.1	ILMN_1756693	0006590564	I	1633	CTAAATAGAAAGCACATATCCCCCGCTTTCCAGCCGCCACTTCCGCCCAC	16	-	24950819-24950868	16p12.1b	Homo sapiens Rho GTPase activating protein 17 (ARHGAP17), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	FLJ37567; MSTP110; DKFZp564A1363; MSTP066; RICH1; MST066; FLJ43368; MGC87805; MSTP038; WBP15; NADRIN; MST110	FLJ37567; MSTP110; DKFZp564A1363; MSTP066; RICH1; MST066; FLJ43368; MGC87805; MSTP038; WBP15; NADRIN; MST110
Homo sapiens	Unigene	Hs.540709	ILMN_105303	HS.540709	Hs.540709		Hs.540709		23537466	BU684474			ILMN_1916636	0003780639	S	190	AGGCACCTGGGGAAAAGGAGAGCAGCAGATTCCAGGCAGTGAGGGAGACG	17_random	-	77414027-77414076		UI-CF-EN0-acp-h-08-0-UI.s1 UI-CF-EN0 Homo sapiens cDNA clone UI-CF-EN0-acp-h-08-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_936446.1	ILMN_166542	LOC728789	XM_001132880.1	XM_001132880.1		728789	113411346	XM_001132880.1	LOC728789	XP_001132880.1	ILMN_1704779	0006760682	S	1700	CTGCAGGGCCCACTCTTACCCATGAAAGACACTCGGGAAATGCTCCTGCG	1	-	144655400-144655449	1q21.1c	PREDICTED: Homo sapiens hypothetical LOC728789 (LOC728789), mRNA.					
Homo sapiens	RefSeq	XR_015542.1	ILMN_165196	LOC728467	XR_015542.1	XR_015542.1		728467	113423466	XR_015542.1	LOC728467		ILMN_3229083	0002630037	A	1139	CTGAACTGGAAATAAAACATGCGAGGAACAGTGTCTCCCTTTTGCAGAGC	12	+	99987068-99987117	12q23.1d	PREDICTED: Homo sapiens misc_RNA (LOC728467), miscRNA.					
Homo sapiens	RefSeq	NM_002272.1	ILMN_14703	KRT4	NM_002272.2	NM_002272.2		3851	109255248	NM_002272.2	KRT4	NP_002263.2	ILMN_1744765	0000540546	S	2200	CCAGGATGATCTTCTGTGCTGGGACAGGGACTCTGCCTCTTGGAGTTTGG	12	-	53200659-53200708	12q13.13d	Homo sapiens keratin 4 (KRT4), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 2452170] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence NAS]	CK4; CYK4; K4; FLJ31692	CK4; CYK4; FLJ31692; K4
Homo sapiens	RefSeq	NM_014916.2	ILMN_18423	LMTK2	NM_014916.2	NM_014916.2		22853	38016936	NM_014916.2	LMTK2	NP_055731.2	ILMN_1724315	0001240270	S	5327	GGATCTTCAGTTATTCGAGGGGAATGAGGCAGGTCAAGCCGATGCTAGCC	7	+	97673262-97673311	7q21.3d	Homo sapiens lemur tyrosine kinase 2 (LMTK2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12393858] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 12393858] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 12393858] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [pmid 12393858] [evidence IDA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12393858] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12393858] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA1079; cprk; AATYK2; KPI-2; BREK; KPI2; LMR2	KIAA1079; cprk; AATYK2; KPI-2; BREK; KPI2; LMR2
Homo sapiens	RefSeq	NR_000011.1	ILMN_7210	SNORA70	NR_000011.1	NR_000011.1		26778	22546026	NR_000011.1	SNORA70		ILMN_1730773	0000650278	S	52	CGATGGCTGCACACAGCAGCTTCCTTGGTAGTGTACGCAGCCTGTTGGTT	X	+	153281867-153281916	Xq28g	Homo sapiens small nucleolar RNA, H/ACA box 70 (SNORA70), small nucleolar RNA.				U70; RNU70; DXS648E	U70; RNU70; DXS648E
Homo sapiens	RefSeq	NM_016426.4	ILMN_23841	GTSE1	NM_016426.4	NM_016426.4		51512	51317385	NM_016426.4	GTSE1	NP_057510.2	ILMN_1771039	0006980382	S	4249	CTCTTATCTACCTATGACCTGCGAGCTGCCCACCACCCCCAGTTGTTGCG	22	+	45108031-45108080	22q13.31d	Homo sapiens G-2 and S-phase expressed 1 (GTSE1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [pmid 10974554] [evidence NAS]	Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [pmid 10974554] [evidence NAS]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle [goid 6977] [pmid 10974554] [evidence NAS]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [pmid 10974554] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	B99	B99
Homo sapiens	RefSeq	XM_001714842.1	ILMN_339854	LOC100129410	XM_001714842.1	XM_001714842.1		100129410	169166532	XM_001714842.1	LOC100129410	XP_001714894.1	ILMN_3258698	0000150685	M	9	AACCCTCAGCGGGAATCGGACATGCCCTAGCCAGGAAACTGAGCAGTCAG	4	-	71416353-71416402	4q13.3a	PREDICTED: Homo sapiens hypothetical protein LOC100129410 (LOC100129410), mRNA.					
Homo sapiens	RefSeq	NM_003545.3	ILMN_692	HIST1H4E	NM_003545.3	NM_003545.3		8367	21264600	NM_003545.3	HIST1H4E	NP_003536.1	ILMN_1681542	0002230619	S	276	GAGACAGGGACGCACTCTTTACGGCTTCGGCGGCTAATGCTACCGCTTAA	6	+	26205148-26205184:26205185-26205197	6p22.1d	Homo sapiens histone cluster 1, H4e (HIST1H4E), mRNA.				H4FJ; H4/j	H4FJ; H4/j
Homo sapiens	RefSeq	XM_936390.1	ILMN_44286	LOC642243	XM_936390.1	XM_936390.1		642243	89041024	XM_936390.1	LOC642243	XP_941483.1	ILMN_1792532	0006620095	S	703	GGGAAAGTACGAGAAGGCCAGTGGGGCTGGAGCAGAGGAAGCTGTTGGAA					PREDICTED: Homo sapiens similar to hydrocephalus inducing (LOC642243), mRNA.					
Homo sapiens	RefSeq	NM_001004297.1	ILMN_16980	OR13A1	NM_001004297.2	NM_001004297.2		79290	153791571	NM_001004297.2	OR13A1	NP_001004297.2	ILMN_1767244	0001780465	S	1904	ATCTGACCTACCTAATTGGCCTGGAGCGAGGACAGCTGCCATGAGTCAGC	10	-	45798226-45798275	10q11.21d	Homo sapiens olfactory receptor, family 13, subfamily A, member 1 (OR13A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	FLJ16797	FLJ16797
Homo sapiens	RefSeq	NM_000545.3	ILMN_27901	TCF1	NM_000545.3	NM_000545.3		6927	38016908	NM_000545.3	TCF1	NP_000536.3	ILMN_1659929	0004780554	S	2923	AGGAGCTACCTGTGTGGACAGGACTAACACTCAGAAGCCTGGGGGCCTGG	12	+	119924382-119924431	12q24.31a	Homo sapiens transcription factor 1, hepatic; LF-B1, hepatic nuclear factor (HNF1), albumin proximal factor (TCF1), mRNA.				MODY3; HNF1; HNF1A; LFB1	MODY3; HNF1; HNF1A; LFB1
Homo sapiens	RefSeq	NM_031265.1	ILMN_8083	MUCDHL	NM_031265.1	NM_031265.1		53841	13929444	NM_031265.1	MUCDHL	NP_112555.1	ILMN_1652784	0004390762	I	303	ATTTCGGGATGAAGCTGCCTGGGCCCACACCCTCAGCACTGACCACTGAT	11	-	614355-614356:614357-614404	11p15.5d	Homo sapiens mucin and cadherin-like (MUCDHL), transcript variant 4, mRNA.				MU-PCDH; FLJ20219	MU-PCDH; FLJ20219
Homo sapiens	RefSeq	NM_152628.2	ILMN_854	SNX31	NM_152628.2	NM_152628.2		169166	24432084	NM_152628.2	SNX31	NP_689841.2	ILMN_1766770	0004640195	S	2058	CCAATATGGATGTACTCAAAGTGAAACGCTGCCCTGTTCTCTGCTTGACC	8	-	101654635-101654684	8q22.3a	Homo sapiens sorting nexin 31 (SNX31), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]		
Homo sapiens	RefSeq	NM_033633.1	ILMN_11716	SCAND2	NM_033633.1	NM_033633.1		54581	15991816	NM_033633.1	SCAND2	NP_378659.1	ILMN_1658502	0002680114	A	1492	AGGAGATAGTGAGCAGCTCCCAGGAGGCATGGAGGGATCCAGAACCTGGA	15	+	82981633-82981655:82982631-82982657	15q25.2b	Homo sapiens SCAN domain containing 2 (SCAND2), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Homo sapiens	RefSeq	NM_181872.1	ILMN_164575	DMRT2	NM_006557.4	NM_006557.4		10655	153791776	NM_006557.4	DMRT2	NP_006548.1	ILMN_1751785	0001190091	A	2358	CTTAAGAGGCCTTCATCTGCCATCACTCGTGTCTCTCAGTGAAAGGCTGC	9	+	1047232-1047281	9p24.3b	Homo sapiens doublesex and mab-3 related transcription factor 2 (DMRT2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [pmid 10332030] [evidence TAS]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 10332030] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10332030] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Homo sapiens	RefSeq	NM_006557.3	ILMN_164575	DMRT2	NM_006557.4	NM_006557.4		10655	153791776	NM_006557.4	DMRT2	NP_006548.1	ILMN_1728183	0005220373	I	997	AATAGTCTTGTCTCTTAATGCGTAGGGGGCCTGGGAAGAATATTAAAATT	9	+	1045871-1045920	9p24.3b	Homo sapiens doublesex and mab-3 related transcription factor 2 (DMRT2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [pmid 10332030] [evidence TAS]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 10332030] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10332030] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]		
Homo sapiens	RefSeq	NM_183412.2	ILMN_166168	FBXO2	NM_012168.4	NM_012168.4		26232	48995171	NM_012168.4	FBXO2	NP_036300.2	ILMN_1689380	0001850519	I	304	CTGCGGGCTGCGCGAGTCCCGGGGCGGCGAGTCCCGGCGCTGTCCGCGTC	1	-	11714386-11714397:11714398-11714435	1p36.22b	Homo sapiens F-box protein 2 (FBXO2), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10531035] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]	Fbs1; FBG1; FBX2; NFB42	Fbx44; FBG3; DKFZp781J0852; FBX30; Fbxo6a; MGC14140
Homo sapiens	RefSeq	NM_012168.4	ILMN_166168	FBXO2	NM_012168.4	NM_012168.4		26232	48995171	NM_012168.4	FBXO2	NP_036300.2	ILMN_1803211	0004540215	S	1302	TAGTCCATAGCGTCCTCACCTTCCCCAAGCCACACATCCTCCTCCCATCC	1	-	11708632-11708681	1p36.22b	Homo sapiens F-box protein 2 (FBXO2), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10531035] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 6516] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]	Fbs1; FBG1; FBX2; NFB42	Fbs1; FBG1; FBX2; NFB42
Homo sapiens	RefSeq	NM_152677.1	ILMN_21186	ZSCAN4	NM_152677.1	NM_152677.1		201516	22749364	NM_152677.1	ZSCAN4	NP_689890.1	ILMN_1725718	0007560528	S	1886	CATGTCCCTTTTGTAAGACAAGCTACCGCCAGTCATCCACATACCACCGC	19	+	62881972-62882021	19q13.43b	Homo sapiens zinc finger and SCAN domain containing 4 (ZSCAN4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ35105; ZNF494; MGC126789; MGC126787	FLJ35105; ZNF494; MGC126789; MGC126787
Homo sapiens	RefSeq	NM_000154.1	ILMN_18040	GALK1	NM_000154.1	NM_000154.1		2584	4503894	NM_000154.1	GALK1	NP_000145.1	ILMN_1803194	0003520278	S	1303	GTGCCCGGTGCCATCTTCCATATCCGGGTGCTCAATAAACTTGTGCCTCC	17	-	73754026-73754075	17q25.1d	Homo sapiens galactokinase 1 (GALK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8908517] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8908517] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7542884] [evidence EXP]	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose [goid 19402] [evidence IEA]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [pmid 15024738] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-galactose = ADP + D-galactose 1-phosphate [goid 4335] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-galactose = ADP + D-galactose 1-phosphate [goid 4335] [pmid 12694189] [evidence IDA]; Catalysis of the reaction: ATP + D-galactose = ADP + D-galactose 1-phosphate [goid 4335] [pmid 7542884] [evidence IDA]; Catalysis of the reaction: ATP + D-galactose = ADP + D-galactose 1-phosphate [goid 4335] [pmid 7542884] [evidence EXP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12694189] [evidence IDA]; Interacting selectively with the aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides [goid 5534] [pmid 14596685] [evidence IDA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GALK; GK1	GALK; GK1
Homo sapiens	RefSeq	NR_002571.1	ILMN_14547	SNORD58A	NR_002571.1	NR_002571.1		26791	77735353	NR_002571.1	SNORD58A		ILMN_3236149	0002510274	S	1	CTGCAGTGATGACTTTCTTAGGACACCTTTGGATTTACCGTGAAAATTAA	18	-	47017667-47017716	18q21.1f	Homo sapiens small nucleolar RNA, C/D box 58A (SNORD58A), small nuclear RNA.				RNU58A; U58a	RNU58A; U58a
Homo sapiens	RefSeq	NM_182607.3	ILMN_20425	VSIG1	NM_182607.3	NM_182607.3		340547	52694673	NM_182607.3	VSIG1	NP_872413.1	ILMN_1806198	0002370047	S	2928	TCACCCACATCTCACCTTGAAGAAACTTACAGGTAGACTTACCTTTTCAC	X	+	107208870-107208919	Xq22.3c	Homo sapiens V-set and immunoglobulin domain containing 1 (VSIG1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			GPA34; MGC44287; 1700062D20Rik; dJ889N15.1	GPA34; MGC44287; 1700062D20Rik; dJ889N15.1
Homo sapiens	RefSeq	XM_001715080.1	ILMN_337859	LOC391763	XM_001715080.1	XM_001715080.1		391763	169167770	XM_001715080.1	LOC391763	XP_001715132.1	ILMN_3202648	0000520056	A	408	GAACGCGGCCATTGCCATGGCTGGAATAGCCAAGCTCTTTGTTGGAGAGG				5p15.1a	PREDICTED: Homo sapiens similar to TBP-associated factor 11 (LOC391763), mRNA.					
Homo sapiens	RefSeq	XR_041658.1	ILMN_343307	LOC728463	XR_041658.1	XR_041658.1		728463	169161194	XR_041658.1	LOC728463		ILMN_3225246	0000620521	A	1880	CGGCATGACTCTGCAGCCATACTGACCAGACAGATGATTTAAACTGGAAA	1	-	216584352-216584401	1q41c	PREDICTED: Homo sapiens hypothetical protein LOC728463 (LOC728463), miscRNA.					
Homo sapiens	RefSeq	NM_020679.2	ILMN_26124	MIF4GD	NM_020679.2	NM_020679.2		57409	23510351	NM_020679.2	MIF4GD	NP_065730.2	ILMN_1743806	0001110243	S	1216	CACTGGTGGGATATTTTGGGATGTCAAGGGGTGGAGGCAGAGCACAAGTC	17	-	73262455-73262504	17q25.1c	Homo sapiens MIF4G domain containing (MIF4GD), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLIP1; MIFD; MGC45027; AD023	SLIP1; MIFD; MGC45027; AD023
Homo sapiens	RefSeq	XM_001726191.1	ILMN_344967	C19ORF29OS	XM_001726191.1	XM_001726191.1		404665	169213649	XM_001726191.1	C19orf29OS	XP_001726243.1	ILMN_3187980	0005490494	A	205	AATGGACCCCACCAGCCAGCACGGGGAGGAAACTGAGGCCTGGCGAAAGA				19p13.3e	PREDICTED: Homo sapiens chromosome 19 open reading frame 29 opposite strand (C19orf29OS), mRNA.					
Homo sapiens	RefSeq	NM_153699.1	ILMN_165458	GSTA5	NM_153699.1	NM_153699.1		221357	24308513	NM_153699.1	GSTA5	NP_714543.1	ILMN_1788122	0002370594	S	646	CACGGTGAAGAAGTTTCTGCAGCCTGGCAGCCAGAGAAAGCCTCCCATGG	6	-	52804648-52804697	6p12.1d	Homo sapiens glutathione S-transferase alpha 5 (GSTA5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_017781.2	ILMN_19493	CYP2W1	NM_017781.2	NM_017781.2		54905	64368471	NM_017781.2	CYP2W1	NP_060251.2	ILMN_1744458	0001230152	S	2023	GCGTATGACTGGTGCAGGGAGGCAAGGCCCACATTCTCCTTCAGAGACAG	7	+	995521-995570	7p22.3c	Homo sapiens cytochrome P450, family 2, subfamily W, polypeptide 1 (CYP2W1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC34287	MGC34287
Homo sapiens	RefSeq	NM_139016.2	ILMN_165269	SNHG11	NR_003239.1	NR_003239.1		128439	115527095	NR_003239.1	SNHG11		ILMN_1791884	0004560332	S	967	CCTCCGTGTCCTCCCGCCTCCTCCTGGTGTGACTTCTGAAAACCAAGAAT	20	+	36512858-36512907	20q11.23c	Homo sapiens small nucleolar RNA host gene 11 (non-protein coding) (SNHG11), non-coding RNA.					
Homo sapiens	RefSeq	NM_019007.3	ILMN_6931	ARMCX6	NM_019007.3	NM_019007.3		54470	57546907	NM_019007.3	ARMCX6	NP_061880.2	ILMN_1768226	0004150020	A	531	TGAAACTATGGCTCGGCCCTGGACTGAGGATGGGGATTGGACTGAACCTG	X	-	100871375-100871424	Xq22.1c	Homo sapiens armadillo repeat containing, X-linked 6 (ARMCX6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ20811	FLJ20811
Homo sapiens	RefSeq	NM_019007.3	ILMN_6931	ARMCX6	NM_019007.3	NM_019007.3		54470	57546907	NM_019007.3	ARMCX6	NP_061880.2	ILMN_2414533	0001690475	A	1411	CCAGGCAGGGGCTCCCACAGAGCTTTGAGTAACTTCTTGGTTGTGCAGTC	X	-	100870495-100870544	Xq22.1c	Homo sapiens armadillo repeat containing, X-linked 6 (ARMCX6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ20811	FLJ20811
Homo sapiens	RefSeq	NM_019007.3	ILMN_6931	ARMCX6	NM_019007.3	NM_019007.3		54470	57546907	NM_019007.3	ARMCX6	NP_061880.2	ILMN_1716026	0004490215	I	133	GGCCTGTAGGTTTCGGCACAAGTTTCAGCGAGAGAAGGAGAAAACTGCCT	X	-	100872509-100872558	Xq22.1c	Homo sapiens armadillo repeat containing, X-linked 6 (ARMCX6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ20811	FLJ20811
Homo sapiens	Unigene	Hs.560263	ILMN_114132	HS.560263	Hs.560263		Hs.560263		24529624	CA311526			ILMN_1849046	0005090494	S	374	TCAGACAAGCCAGGCACGGTGGCTCATGTCAATCACGTTGAGATCAAGTC	14	+	77205620-77205641		UI-CF-FN0-afd-g-08-0-UI.s1 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-afd-g-08-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_182498.2	ILMN_2963	ZNF428	NM_182498.2	NM_182498.2		126299	38788218	NM_182498.2	ZNF428	NP_872304.2	ILMN_1652754	0001820543	S	1083	GATGGGGTACTGCCGGTCTGTGTTGTCTTAGAAGTAGATGTGTGATGGCC	19	-	48803470-48803519	19q13.31a	Homo sapiens zinc finger protein 428 (ZNF428), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC51082; Zfp428; C19orf37	MGC51082; Zfp428; C19orf37
Homo sapiens	RefSeq	XM_929460.1	ILMN_39048	LOC644086	XM_929460.1	XM_929460.1		644086	89024711	XM_929460.1	LOC644086	XP_934553.1	ILMN_1732716	0002760730	A	1188	AAGTCAGCGCTTCCCATGCTGGAAGAAGCAAGCAGCCCCAGGGTGGAATC	7	+	29152798-29152847		PREDICTED: Homo sapiens hypothetical protein LOC644086, transcript variant 1 (LOC644086), mRNA.					
Homo sapiens	RefSeq	XM_929460.1	ILMN_39048	LOC644086	XM_929460.1	XM_929460.1		644086	89024711	XM_929460.1	LOC644086	XP_934553.1	ILMN_1748444	0006180136	I	106	GGTTTTCCCTGGGTCCTTGGGGCTTCGTTTTCTGAAGGTTTCTGTGTCAC	7	+	29134030-29134079		PREDICTED: Homo sapiens hypothetical protein LOC644086, transcript variant 1 (LOC644086), mRNA.					
Homo sapiens	RefSeq	XM_926010.1	ILMN_39482	LOC642514	XM_926010.1	XM_926010.1		642514	89028189	XM_926010.1	LOC642514	XP_931103.1	ILMN_1693286	0007160050	S	2	TGAAGGCCGCTGAGAAGGCTGCAGAAGAAAAATTGGAAGCTAGCAGGGGT	8	-	89065875-89065924		PREDICTED: Homo sapiens hypothetical protein LOC642514 (LOC642514), mRNA.					
Homo sapiens	RefSeq	NM_007001.1	ILMN_17915	SLC35D2	NM_007001.1	NM_007001.1		11046	42734307	NM_007001.1	SLC35D2	NP_008932.1	ILMN_1706571	0004060576	S	1288	AGCCCCAGCTGCTCTTCTAGGGACCTATGGGGCCTTCGTGGCATCTCTGT	9	-	98123042-98123091	9q22.32b	Homo sapiens solute carrier family 35, member D2 (SLC35D2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [pmid 9927678] [evidence NAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	HFRC1; SQV7L; MGC117215; UGTrel8; MGC142139; hfrc	HFRC1; MGC117215; MGC142139; SQV7L; UGTrel8; hfrc
Homo sapiens	RefSeq	XM_001719378.1	ILMN_343099	LOC100132728	XM_001719378.1	XM_001719378.1		100132728	169162739	XM_001719378.1	LOC100132728	XP_001719430.1	ILMN_3242196	0007510347	S	1	ATGAGTCTGAGGCGGAGGGAGTCATGGCAGGAAGGACAAGCGTTTAGAAA	1	-	202139747-202139796	1q32.1e	PREDICTED: Homo sapiens similar to cpn10 protein (LOC100132728), mRNA.					
Homo sapiens	Unigene	Hs.204481	ILMN_81861	HS.204481	Hs.204481		Hs.204481		27840445	BX117204			ILMN_1895227	0000150735	S	66	TAGGTCCGGCTCTGGGCCACCGTGTATGATCCTGGGCAAGTCACTTCTTT	17	-	40391941-40391990		BX117204 NCI_CGAP_Kid12 Homo sapiens cDNA clone IMAGp998G125957, mRNA sequence					
Homo sapiens	RefSeq	NM_018098.4	ILMN_6436	ECT2	NM_018098.4	NM_018098.4		1894	21735571	NM_018098.4	ECT2	NP_060568.3	ILMN_1717173	0006840215	S	3808	CTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC	3	+	172539161-172539210	3q26.31b	Homo sapiens epithelial cell transforming sequence 2 oncogene (ECT2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16129829] [evidence IPI]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	FLJ10461; MGC138291	FLJ10461; MGC138291
Homo sapiens	RefSeq	NM_005958.3	ILMN_9086	MTNR1A	NM_005958.3	NM_005958.3		4543	60498974	NM_005958.3	MTNR1A	NP_005949.1	ILMN_1708845	0006860056	S	964	GCCAGGGTGTTCTTTGTGGACAGCTCTAACGACGTGGCCGATAGGGTTAA	4	-	187691894-187691943	4q35.2a	Homo sapiens melatonin receptor 1A (MTNR1A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8700109] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 9645677] [evidence TAS]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [pmid 7946354] [evidence TAS]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 9645677] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with melatonin, N-acetyl-5-methoxytryptamine, to initiate a change in cell activity. Melatonin is a neuroendocrine substance that stimulates the aggregation of melanosomes in melanophores, thus lightening the skin [goid 8502] [pmid 9645677] [evidence TAS]	MEL-1A-R; MT1	MEL-1A-R; MT1
Homo sapiens	RefSeq	XM_926141.1	ILMN_38531	LOC642995	XM_926141.1	XM_926141.1		642995	89060491	XM_926141.1	LOC642995	XP_931234.1	ILMN_1690568	0000670044	I	525	CCTAGTTTTGTTTAATTCTTGAGCGATGTATGCACCAAAGCACATAGAAG	X	-	359847-359896		PREDICTED: Homo sapiens similar to transcriptional regulator ATRX isoform 1, transcript variant 1 (LOC642995), mRNA.					
Homo sapiens	RefSeq	XM_001717914.1	ILMN_340963	LOC388553	XM_001717914.1	XM_001717914.1		388553	169213964	XM_001717914.1	LOC388553	XP_001717966.1	ILMN_3282917	0004280554	M	1505	TGTTCTGCAGGATGAACCGGAAGCAGTACATCCGATCCTGCCCTGGAACC				19q13.32a	PREDICTED: Homo sapiens similar to hCG1645909 (LOC388553), mRNA.					
Homo sapiens	RefSeq	NM_006866.1	ILMN_12456	LILRA2	NM_006866.1	NM_006866.1		11027	5803067	NM_006866.1	LILRA2	NP_006857.1	ILMN_1716983	0003370594	S	1530	CAGGGACAGATCTGATGATCCCAGGAGGCTCTGGAGGACAATCTAGGACC	19	+	59790667-59790716	19q13.42a	Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 (LILRA2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 9548455] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9548455] [evidence TAS]	Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 9548455] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9548455] [evidence TAS]	CD85H; LIR-7; LIR7; ILT1	CD85H; LIR-7; LIR7; ILT1
Homo sapiens	Unigene	Hs.573359	ILMN_125540	HS.573359	Hs.573359		Hs.573359		78268069	DA196996			ILMN_1903693	0001740397	S	393	ACGTGGTAGGGATCCTCAAGATGAATCAGACAACAAGGGAGGCAGAGGGG	7	+	31123008-31123057		DA196996 BRAMY4 Homo sapiens cDNA clone BRAMY4002841 5, mRNA sequence					
Homo sapiens	RefSeq	NM_032554.2	ILMN_139290	GPR81	NM_032554.2	NM_032554.2		27198	21314751	NM_032554.2	GPR81	NP_115943.1	ILMN_1811272	0002370678	S	3496	TAGAGCGCTTAAGTTGTTCCTCTGTTATCATGCCTGAATTCCCCCGCCCC	12	-	121776750-121776799	12q24.31c	Homo sapiens G protein-coupled receptor 81 (GPR81), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [pmid 15831516] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FKSG80; GPR104; TA-GPCR	FKSG80; GPR104; TA-GPCR
Homo sapiens	RefSeq	NM_014140.2	ILMN_19734	SMARCAL1	NM_014140.2	NM_014140.2		50485	21071059	NM_014140.2	SMARCAL1	NP_054859.2	ILMN_1752111	0006350647	S	2789	ATGGAGCTCCTGGAAGCAGCAGAGTCCTTTGACCCAGGAAGTGCTTCAGG	2	+	217055770-217055819	2q35c	Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 (SMARCAL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10857751] [evidence TAS]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [pmid 10713074] [evidence TAS]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10857751] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 10713074] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 10713074] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HHARP; HARP	HHARP; HARP
Homo sapiens	RefSeq	XR_037726.1	ILMN_346643	LOC730110	XR_037726.1	XR_037726.1		730110	169179782	XR_037726.1	LOC730110		ILMN_3303528	0003930685	M	1167	CGTGGCAAAGCCTTTAGCCAGTTCTCACACCTTACTACACGTAAGAGAAT				9p13.3b	PREDICTED: Homo sapiens misc_RNA (LOC730110), miscRNA.					
Homo sapiens	RefSeq	XR_037726.1	ILMN_346643	LOC730110	XR_037726.1	XR_037726.1		730110	169179782	XR_037726.1	LOC730110		ILMN_3226924	0003390195	A	1920	CAGTGTGGCAAGACTTAAACAATGCTCACACCTTATTGCACAGGAAACCC				9p13.3b	PREDICTED: Homo sapiens misc_RNA (LOC730110), miscRNA.					
Homo sapiens	RefSeq	NM_032625.1	ILMN_3341	C7ORF13	NM_032625.1	NM_032625.1		129790	14249145	NM_032625.1	C7orf13	NP_116014.1	ILMN_1737663	0004900338	S	1635	TGGAAGGAGGGTTCTACAGGAACTGGCAGAGCTGAGACTGGGACGCAACC	7	-	156124193-156124242	7q36.3b	Homo sapiens chromosome 7 open reading frame 13 (C7orf13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MY040	MY040
Homo sapiens	Unigene	Hs.562118	ILMN_115294	HS.562118	Hs.562118		Hs.562118		6697959	AW291323			ILMN_1914579	0003360541	S	554	CTTCAAGACAGGCCCAAGCTGGATGCAATTGAGGGGATGCATGGGCAGGG	1	-	206049255-206049304		UI-H-BI2-agg-d-09-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2724160 3, mRNA sequence					
Homo sapiens	RefSeq	NM_130435.2	ILMN_23422	PTPRE	NM_130435.2	NM_130435.2		5791	40805848	NM_130435.2	PTPRE	NP_569119.1	ILMN_2383611	0002490240	A	4544	GTGTGATCTGGTCACTATGTGACTGCCTTTACGGTTTCTCTCCATGTGCT	10	+	129773696-129773745	10q26.2c-q26.2d	Homo sapiens protein tyrosine phosphatase, receptor type, E (PTPRE), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 2170109] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA];  [goid 5001] [pmid 2170109] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	DKFZp313F1310; PTPE; HPTPE; R-PTP-EPSILON	DKFZp313F1310; PTPE; HPTPE; R-PTP-EPSILON
Homo sapiens	RefSeq	NM_130435.2	ILMN_23422	PTPRE	NM_130435.2	NM_130435.2		5791	40805848	NM_130435.2	PTPRE	NP_569119.1	ILMN_1734543	0002340673	A	4431	CAGCCCCCAAACAGCCCAGTGCCGACACCATTGTTCCTTTCACACTTTCC	10	+	129773583-129773632	10q26.2c-q26.2d	Homo sapiens protein tyrosine phosphatase, receptor type, E (PTPRE), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 2170109] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA];  [goid 5001] [pmid 2170109] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	DKFZp313F1310; PTPE; HPTPE; R-PTP-EPSILON	DKFZp313F1310; PTPE; HPTPE; R-PTP-EPSILON
Homo sapiens	RefSeq	NM_130435.2	ILMN_23422	PTPRE	NM_130435.2	NM_130435.2		5791	40805848	NM_130435.2	PTPRE	NP_569119.1	ILMN_1660907	0006100347	I	5	AGCAGAGGGCAGCTGAGAGGCTGGGTGGCTGGGCCTGGGAGACACACAGA	10	+	129735828-129735877	10q26.2c-q26.2d	Homo sapiens protein tyrosine phosphatase, receptor type, E (PTPRE), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 2170109] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA];  [goid 5001] [pmid 2170109] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	DKFZp313F1310; PTPE; HPTPE; R-PTP-EPSILON	DKFZp313F1310; PTPE; HPTPE; R-PTP-EPSILON
Homo sapiens	RefSeq	XM_001720737.1	ILMN_335753	LOC100131716	XM_001720737.1	XM_001720737.1		100131716	169217464	XM_001720737.1	LOC100131716	XP_001720789.1	ILMN_3236304	0004590136	S	1236	CCCAGAGAAGATCATCCAGGTGTGTTGGGGCATCTGGCAGTGGGAGCCCA					PREDICTED: Homo sapiens similar to spermatogenesis and centriole associated 1 (LOC100131716), mRNA.					
Homo sapiens	RefSeq	NM_001972.2	ILMN_164817	ELANE	NM_001972.2	NM_001972.2		1991	58530849	NM_001972.2	ELANE	NP_001963.1	ILMN_1706635	0007650497	S	857	GTCACCTCAGCTGCCCACACCCACACTCTCCAGCATCTGGCACAATAAAC	19	+	807179-807228	19p13.3i	Homo sapiens elastase, neutrophil expressed (ELANE), mRNA.				HLE; GE; PMN-E; NE; HNE	HLE; GE; PMN-E; NE; HNE
Homo sapiens	RefSeq	NM_004959.3	ILMN_28995	NR5A1	NM_004959.3	NM_004959.3		2516	24432033	NM_004959.3	NR5A1	NP_004950.2	ILMN_1815320	0000070142	S	2983	TGAAACATGTGCCCCTGCCAAGGCCGGAGACCCACAGCCCTGAAACGAGA	9	-	126283398-126283447	9q33.3a	Homo sapiens nuclear receptor subfamily 5, group A, member 1 (NR5A1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10567391] [evidence IDA]	The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation [goid 1553] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IEA]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation [goid 1553] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8205615] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10369247] [evidence TAS];  [goid 7538] [pmid 9590178] [evidence TAS]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 9590178] [evidence TAS]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the adrenal gland over time, from its formation to the mature structure. This gland can either be a discrete structure located bilaterally above each kidney, or a cluster of cells in the head kidney that perform the functions of the adrenal gland. In either case, this organ consists of two cells types, aminergic chromaffin cells and steroidogenic cortical cells [goid 30325] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 50810] [pmid 10567391] [evidence TAS]; Any process by which a protein is maintained in the nucleus and prevented from moving elsewhere. These include sequestration within the nucleus, protein stabilization to prevent transport elsewhere and the active retrieval of proteins that escape the nucleus [goid 51457] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 8205615] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16709599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10567391] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SF1; FTZ1; ELP; FTZF1; AD4BP; SF-1	SF1; FTZ1; ELP; FTZF1; AD4BP; SF-1
Homo sapiens	RefSeq	NM_203394.1	ILMN_4548	E2F7	NM_203394.2	NM_203394.2		144455	145580625	NM_203394.2	E2F7	NP_976328.2	ILMN_1798210	0004560450	S	5320	GTTGTCACAGAGGCTGTGTGTGCCCTACACTGACCAGGGTTTGTAAAACC	12	-	77415397-77415446	12q21.2b	Homo sapiens E2F transcription factor 7 (E2F7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15133492] [evidence IPI]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	FLJ12981	
Homo sapiens	RefSeq	XM_925913.1	ILMN_171519	LOC731444	XM_001133111.1	XM_001133111.1		731444	113427998	XM_001133111.1	LOC731444	XP_001133111.1	ILMN_1661645	0002750484	S	270	TGCTGCCCCATGCCCCAGCAACCTCCCTCCTCAGTGTTCACCCAGGAAAA					PREDICTED: Homo sapiens similar to ATPase, Class II, type 9B (LOC731444), mRNA.					
Homo sapiens	RefSeq	NM_004407.1	ILMN_17457	DMP1	NM_004407.1	NM_004407.1		1758	4758171	NM_004407.1	DMP1	NP_004398.1	ILMN_1775622	0004150280	S	2105	GCTGAGTGCCAAGGCCAGTGAGGCTATGAACACGATATCAATCTGGGGAC	4	+	88803960-88804009	4q22.1a	Homo sapiens dentin matrix acidic phosphoprotein (DMP1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 8509401] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 8509401] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [pmid 8509401] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8509401] [evidence TAS]		
Homo sapiens	Unigene	Hs.473255	ILMN_95233	HS.473255	Hs.473255		Hs.473255		34526956	AK130202			ILMN_1832425	0004250286	S	2189	TAGCTCACCGAACACCCAGGGGGACCAGAACTCTCTGCCTTCCACTCAGT					Homo sapiens cDNA FLJ26692 fis, clone MPG07890					
Homo sapiens	RefSeq	XM_928688.3	ILMN_31116	LOC653656	XM_928688.3	XM_928688.3		653656	169213494	XM_928688.3	LOC653656	XP_933781.1	ILMN_3237226	0003310373	S	376	GTATCCTTGCACCGGGGACGGCCGGTGAATCTCTGGACAGAGCTGGTGCT	19	-	6989102-6989151	19p13.2e	PREDICTED: Homo sapiens similar to methyl-CpG binding domain protein 3-like 2 (LOC653656), mRNA.					
Homo sapiens	RefSeq	XM_938266.1	ILMN_32229	LOC649200	XM_938266.1	XM_938266.1		649200	89060784	XM_938266.1	LOC649200	XP_943359.1	ILMN_1758559	0006550167	S	500	CCTCCTCCTGGAATACCCCCTTGCTGCCAGTGTTAAAACCGTCTGGTGAC					PREDICTED: Homo sapiens hypothetical protein LOC649200 (LOC649200), mRNA.					
Homo sapiens	RefSeq	NM_198236.1	ILMN_2135	ARHGEF11	NM_198236.1	NM_198236.1		9826	38026933	NM_198236.1	ARHGEF11	NP_937879.1	ILMN_1656546	0002510594	I	1625	TATCTGTGAGGTCTATAGCCGGAACCCCGCCAGCCTACTGGAAGAGCAGA	1	-	156941556-156941605	1q23.1b	Homo sapiens Rho guanine nucleotide exchange factor (GEF) 11 (ARHGEF11), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 10026210] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15755723] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 10026210] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10026210] [evidence NAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10026210] [evidence NAS]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [pmid 10026210] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10026210] [evidence TAS]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [pmid 10026210] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10026210] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 10026210] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [pmid 15755723] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [pmid 10026210] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10026210] [evidence IPI]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp667F1223; KIAA0380; PDZ-RHOGEF; GTRAP48	KIAA0380; DKFZp667F1223; PDZ-RHOGEF; GTRAP48
Homo sapiens	RefSeq	NM_007127.1	ILMN_14423	VIL1	NM_007127.1	NM_007127.1		7429	6005943	NM_007127.1	VIL1	NP_009058.1	ILMN_1661750	0004180411	S	2366	CCGAGGGTGTGGACCCCAGCAGGAAGGAGGAACACCTGTCCATTGAAGAT	2	+	219013801-219013829:219022190-219022210	2q35e	Homo sapiens villin 1 (VIL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 2846586] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process by which an actin filament is broken down into smaller filaments [goid 51014] [pmid 2846586] [evidence TAS]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	VIL; D2S1471	VIL; D2S1471
Homo sapiens	RefSeq	NM_033223.1	ILMN_163776	GABRG3	NM_033223.3	NM_033223.3		2567	110556626	NM_033223.3	GABRG3	NP_150092.2	ILMN_1725808	0002000487	S	1603	GGTACACACTTGACCTTCTGTCGTCCCCAGACCAGTAGTGACCAATCGGG	15	+	25451649-25451698	15q12c	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, gamma 3 (GABRG3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence NAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence NAS]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Homo sapiens	RefSeq	NM_000308.1	ILMN_10174	CTSA	NM_000308.2	NM_000308.2		5476	119395728	NM_000308.2	CTSA	NP_000299.2	ILMN_1719286	0006840246	S	1856	CAAGCAGCCATACTGATGACCACAGCAACCAGCTCCACGGCCTGATGCAG	20	+	43960481-43960496:43960497-43960530	20q13.12b	Homo sapiens cathepsin A (CTSA), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 3136930] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 1387645] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 1387645] [evidence TAS]	Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Increases the activity of an enzyme [goid 8047] [pmid 3107551] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	NGBE; PPCA; GSL; PPGB; GLB2	CTSA; NGBE; PPCA; GSL; GLB2
Homo sapiens	RefSeq	Hs.350065	ILMN_19912	PLXNA2	NM_025179.3	NM_025179.3		5362	113722115	NM_025179.3	PLXNA2	NP_079455.3	ILMN_1844408	0005890204	S	10996	CCTTCATCTTGGCATGGAAGGTGGCAGGCAGAATGGAAATACTCCCCCCA	1	-	208195985-208196034	1q32.2a	Homo sapiens plexin A2 (PLXNA2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	KIAA0463; FLJ30634; OCT; PLXN2; FLJ11751	
Homo sapiens	RefSeq	NM_025179.2	ILMN_19912	PLXNA2	NM_025179.3	NM_025179.3		5362	113722115	NM_025179.3	PLXNA2	NP_079455.3	ILMN_1680617	0007510598	S	6495	TGGGAGTCTCAGATGGAAGGACAAGTGATGGGGATCAGGCCCCAGAGCTT	1	-	208200486-208200535	1q32.2a	Homo sapiens plexin A2 (PLXNA2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	KIAA0463; FLJ30634; OCT; PLXN2; FLJ11751	KIAA0463; FLJ30634; OCT; PLXN2; FLJ11751
Homo sapiens	RefSeq	NM_172166.2	ILMN_42816	MSH5	NM_172166.2	NM_172166.2		4439	88999571	NM_172166.2	MSH5	NP_751898.1	ILMN_2325394	0003130326	A	2387	CGTGGCAAGGAGGTCTCAGACTTGATCCGCAGTGGAAAACCCATCAAGCC	6	+	31729721-31729732:31729889-31729926	6p21.33a	Homo sapiens mutS homolog 5 (E. coli) (MSH5), transcript variant 4, mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 9740671] [evidence TAS]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9787078] [evidence TAS]; Progression through prophase of meiosis II; analogous to mitotic prophase [goid 7136] [pmid 9916805] [evidence TAS]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	DKFZp434C1615; MGC2939; G7; MutSH5; NG23	DKFZp434C1615; MGC2939; G7; MutSH5; NG23
Homo sapiens	RefSeq	XM_928976.1	ILMN_137569	LOC643763	XM_928976.1	XM_928976.1		643763	89028061	XM_928976.1	LOC643763	XP_934069.1	ILMN_1697476	0006520044	S	1415	CAGAGTCATCTTCCAGGTTCTACTTATTAAGCAATATCCCATGAAGTAGC	8	+	64054394-64054443	8q12.3b	PREDICTED: Homo sapiens hypothetical protein LOC643763 (LOC643763), mRNA.					
Homo sapiens	Unigene	Hs.557356	ILMN_112803	HS.557356	Hs.557356		Hs.557356		18995672	BM685776			ILMN_1832180	0004590187	S	287	GAGAATGCTTCGCTGAGAGGGTGGTGGCTAAGTGTGAGGCATGATTACCT	3	-	139203638-139203687		UI-E-CK0-aar-a-03-0-UI.r1 UI-E-CK0 Homo sapiens cDNA clone UI-E-CK0-aar-a-03-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_182606.2	ILMN_4614	TMPRSS11A	NM_182606.2	NM_182606.2		339967	47271482	NM_182606.2	TMPRSS11A	NP_872412.2	ILMN_1712162	0003120605	S	2348	GCCCTCGCATTGCTACAGCCAAATAGCTTATAAGGCTTATGGCAATGTCC	4	-	68458644-68458693	4q13.2b	Homo sapiens transmembrane protease, serine 11A (TMPRSS11A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC133183; ECRG1	MGC133183; ECRG1
Homo sapiens	Unigene	Hs.171009	ILMN_80282	HS.171009	Hs.171009		Hs.171009		27830018	BX099476			ILMN_1874806	0006250575	S	100	CCTACAGTGTGCCTGTGAGTGGAGAAGGAAATAGGCTGCAAAAGAGCCCG	20	-	5042414-5042463		BX099476 NCI_CGAP_CLL1 Homo sapiens cDNA clone IMAGp998E054974, mRNA sequence					
Homo sapiens	RefSeq	NM_004977.2	ILMN_9225	KCNC3	NM_004977.2	NM_004977.2		3748	24497459	NM_004977.2	KCNC3	NP_004968.2	ILMN_1747613	0004780092	S	2853	GCTGGATCTTGAGTCCCATTAGCTGTGAGATGCCTGTGAGAGCCTTCCCG	19	-	55510850-55510899	19q13.33c	Homo sapiens potassium voltage-gated channel, Shaw-related subfamily, member 3 (KCNC3), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 1740329] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 1740329] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [pmid 1740329] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	SCA13; KV3.3; KSHIIID	SCA13; KV3.3; KSHIIID
Homo sapiens	RefSeq	NM_020435.2	ILMN_6786	GJC2	NM_020435.2	NM_020435.2		57165	45439366	NM_020435.2	GJC2	NP_065168.2	ILMN_1723048	0006520356	S	2142	AATGGGGCTCTGGGTTCCTGCCTGTGGCCTGTCTGTCCTCCTCCCTAATT	1	+	226414049-226414098	1q42.13c	Homo sapiens gap junction protein, gamma 2, 47kDa (GJC2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]	A wide pore channel activity that enables a direct cytoplasmic connection from one cell to an adjacent cell. The gap junction can pass large solutes as well as electrical signals between cells. Gap junctions consist of two gap junction hemi-channels, or connexons, one contributed by each membrane through which the gap junction passes [goid 5243] [evidence IEA]	MGC105119; PMLDAR; CX46.6; GJA12; Cx47	MGC105119; PMLDAR; CX46.6; GJA12; Cx47
Homo sapiens	RefSeq	NM_175739.2	ILMN_21825	SERPINA9	NM_175739.2	NM_175739.2		327657	31343337	NM_175739.2	SERPINA9	NP_783866.1	ILMN_1683933	0003780519	S	1096	GGAGCCACTCACTCCAGAAAAGGTGGATAGAGGTGTTCATCCCCAGATTT	14	-	94000916-94000944:94003199-94003219	14q32.13a	Homo sapiens serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9 (SERPINA9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	SERPINA11; GCET1; SERPINA11b	SERPINA11; GCET1; SERPINA11b
Homo sapiens	RefSeq	XM_930893.1	ILMN_42710	LOC642398	XM_930893.1	XM_930893.1		642398	89058278	XM_930893.1	LOC642398	XP_935986.1	ILMN_1728798	0003520301	I	2140	GCATTTTTTCAAAATCATACACATAATACACAAACCAAAGACAAATGATG	21	+	68031-68080		PREDICTED: Homo sapiens hypothetical protein LOC642398, transcript variant 2 (LOC642398), mRNA.					
Homo sapiens	RefSeq	NR_024100.1	ILMN_365403	C21ORF130	NR_024100.1	NR_024100.1		284835	197209859	NR_024100.1	C21orf130		ILMN_3243121	0002230475	S	1964	CGCTAGCCAGACACTGGTCTAGGGCCCAGGAATTCAGCAATAAATGAAAC	21	-	42513432-42513481		Homo sapiens chromosome 21 open reading frame 130 (C21orf130), non-coding RNA.					
Homo sapiens	Unigene	Hs.566307	ILMN_118653	HS.566307	Hs.566307		Hs.566307		6702927	AW296281			ILMN_1898818	0006980707	S	359	GGGTGAAGCATAAAATGACTTCTAGTACAGTTTGGTGTAACTAAGGCACC					UI-H-BI2-aid-d-05-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2728761 3, mRNA sequence					
Homo sapiens	RefSeq	XM_943739.1	ILMN_34767	LOC649500	XM_943739.1	XM_943739.1		649500	88981259	XM_943739.1	LOC649500	XP_948832.1	ILMN_1651508	0005220468	S	1	ATGATCTATTTAAGAAGTAATGGGGCAAGCAAAGAAAGCAGAGCTCGGTC					PREDICTED: Homo sapiens hypothetical protein LOC649500 (LOC649500), mRNA.					
Homo sapiens	RefSeq	XM_936418.1	ILMN_44985	LOC647347	XM_936418.1	XM_936418.1		647347	88944432	XM_936418.1	LOC647347	XP_941511.1	ILMN_1665208	0006620040	S	50	AGGGCCATGAGAAGCGGGTGGCTGCTGCCCTGGAGCTCTCATTCTTACAG					PREDICTED: Homo sapiens hypothetical protein LOC647347 (LOC647347), mRNA.					
Homo sapiens	RefSeq	NM_001855.2	ILMN_178882	COL15A1	NM_001855.3	NM_001855.3		1306	116008151	NM_001855.3	COL15A1	NP_001846.3	ILMN_1768940	0005090026	S	4596	CTGCAGGAAACCCCAGCAGTGTGAACGCATCCCAACATAGGTTAAGAGCA	9	+	100872212-100872261	9q22.33c	Homo sapiens collagen, type XV, alpha 1 (COL15A1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A collagen homotrimer of alpha1(XV) chains; a chondroitin sulfate proteoglycan often found in specialized basement membranes [goid 5582] [pmid 9651385] [evidence TAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9651385] [evidence IC ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 9651385] [evidence IC ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ38566	
Homo sapiens	RefSeq	NM_016590.2	ILMN_166282	PART1	XR_017850.1	XR_017850.1		25859	113416526	XR_017850.1	PART1		ILMN_1724265	0002900064	S	1882	CACAGTGCCAGCCTCTACCTAAGGAAACCCTAGACCTTGGAACCAGTTTC	5	+	59822634-59822683	5q12.1a	PREDICTED: Homo sapiens prostate androgen-regulated transcript 1 (PART1), misc RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		DKFZP586D0823
Homo sapiens	RefSeq	XM_933867.1	ILMN_45962	LOC23117	XM_933867.1	XM_933867.1		23117	89040037	XM_933867.1	LOC23117	XP_938960.1	ILMN_1801940	0002680333	I	8255	CCCTTCCTACATTCTTGTTTTCATTTTTTCGGAGGAAGAGGAGTTGCTAG	16	-	21761990-21762039	16p12.2a	PREDICTED: Homo sapiens KIAA0220-like protein, transcript variant 25 (LOC23117), mRNA.					
Homo sapiens	Unigene	Hs.552427	ILMN_110989	HS.552427	Hs.552427		Hs.552427		60219613	CR936702			ILMN_1830833	0002070524	S	5449	CTCCCACATGAGGACTCCAGCAGCAAGCCCACCCATGGACCTCATCAGAT	17	-	29352405-29352454		Homo sapiens mRNA; cDNA DKFZp686C1250 (from clone DKFZp686C1250)					
Homo sapiens	RefSeq	NM_006167.2	ILMN_434	NKX3-1	NM_006167.2	NM_006167.2		4824	19923351	NM_006167.2	NKX3-1	NP_006158.2	ILMN_1667162	0001110632	S	2969	CCATCTTGCTTTCCCCATTGGAACTAGTCATTAACCCATCTCTGAACTGG	8	-	23592413-23592462	8p21.2d	Homo sapiens NK3 homeobox 1 (NKX3-1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11137288] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11137288] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9537602] [evidence TAS]; The process whose specific outcome is the progression of the salivary gland over time, from its formation to the mature structure. Salivary glands include any of the saliva-secreting exocrine glands of the oral cavity [goid 7431] [evidence IEA]; The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid [goid 30850] [evidence IEA]; The process by which the anatomical structures of branches in a tube are generated and organized. Morphogenesis pertains to the creation of form. A tube is a long hollow cylinder [goid 48754] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11137288] [evidence NAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	NKX3A; BAPX2; NKX3; NKX3.1	NKX3A; BAPX2; NKX3; NKX3.1
Homo sapiens	Unigene	Hs.564859	ILMN_117442	HS.564859	Hs.564859		Hs.564859		2877830	AA808424			ILMN_1864920	0000450370	S	205	GTGATTTAGCTGATGGTCTCCTCGTGATTGGACGGGGGTATGGGTCTGGG					oe53a11.s1 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGE:1415324 3, mRNA sequence					
Homo sapiens	RefSeq	XM_291671.6	ILMN_43683	RBM20	XM_939337.2	XM_939337.2		282996	113422135	XM_939337.2	RBM20	XP_944430.2	ILMN_1749540	0006020671	A	6817	CTGATGGTGTGAGCAGCAGCCGTTAGTATCAGGGTTTCCCATTCTTGGAC				10q25.2a	PREDICTED: Homo sapiens RNA binding motif protein 20 (RBM20), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_138940.2	ILMN_3165	CD200R1	NM_138940.2	NM_138940.2		131450	68215643	NM_138940.2	CD200R1	NP_620386.1	ILMN_2408112	0004280523	A	869	GCAGGGAAGCCAGCTGCGCATATCTCCTGGATCCCAGAGGGCGATTGTGC	3	-	114130492-114130541	3q13.2b	Homo sapiens CD200 receptor 1 (CD200R1), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	HCRTR2; CD200R; MOX2R; OX2R	HCRTR2; CD200R; MOX2R; OX2R
Homo sapiens	RefSeq	NM_183005.1	ILMN_12856	RPP38	NM_183005.3	NM_183005.3		10557	147899154	NM_183005.3	RPP38	NP_892117.1	ILMN_1775466	0001230181	I	576	AGCACCAAGACAGGGTCAGATGTGTTACTGGGCTGGAGTGTGGTGGCACA	10	+	15139757-15139765:15144217-15144257	10p13c	Homo sapiens ribonuclease P/MRP 38kDa subunit (RPP38), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9630247] [evidence TAS]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [pmid 9630247] [evidence TAS]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [pmid 9630247] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15096576] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RP11-455B2.5	RP11-455B2.5
Homo sapiens	RefSeq	NM_015268.2	ILMN_24838	DNAJC13	NM_015268.3	NM_015268.3		23317	112421121	NM_015268.3	DNAJC13	NP_056083.3	ILMN_1752281	0002900722	S	7204	TCTCCTGCATCAAGTCTGCGTGGCCATCCTCCCCCCACCATCCAAGACTA	3	+	132257533-132257582	3q22.1c	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 13 (DNAJC13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	KIAA0678; FLJ25863; RME8	KIAA0678; FLJ25863; RME8
Homo sapiens	RefSeq	Hs.87734	ILMN_171380	DFNB59	NM_001042702.2	NM_001042702.2		494513	148747415	NM_001042702.2	DFNB59	NP_001036167.1	ILMN_1914857	0000630202	S	945	CCCAAAGGGCCTTGCATACTCTGTGGAATGGGGAACTTCAAAAGGGAGAC	2	+	179034101-179034150	2q31.2b	Homo sapiens deafness, autosomal recessive 59 (DFNB59), mRNA.				PJVK	
Homo sapiens	RefSeq	NM_001773.1	ILMN_137184	CD34	NM_001773.1	NM_001773.1		947	4502660	NM_001773.1	CD34	NP_001764.1	ILMN_1732799	0004150669	A	2420	AGCCCAGATCAGCTCCTAACCCTTATCACCAGCTGCCTCTTCTGTGGGTG	1	-	206126679-206126728	1q32.2a	Homo sapiens CD34 antigen (CD34), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12588680] [evidence EXP]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [pmid 15249540] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 15249540] [evidence IDA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [pmid 15249540] [evidence IDA]		
Homo sapiens	RefSeq	NM_001773.1	ILMN_137184	CD34	NM_001773.1	NM_001773.1		947	4502660	NM_001773.1	CD34	NP_001764.1	ILMN_1694249	0004730021	I	1187	GGCCCTCTCCCATCCAGTGTCTCACAGCCCTGCTTACCAGATAATGCTAC	1	-	206127912-206127961	1q32.2a	Homo sapiens CD34 antigen (CD34), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12588680] [evidence EXP]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [pmid 15249540] [evidence IC ]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 15249540] [evidence IDA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [pmid 15249540] [evidence IDA]		
Homo sapiens	RefSeq	NM_153040.1	ILMN_22417	C15ORF32	NM_153040.2	NM_153040.2		145858	142381932	NM_153040.2	C15orf32	NP_694585.1	ILMN_1773848	0005490243	S	1251	TCGCCCTTCAGATCGGGAGCTCCAGCCTTCACCAGAAGCTGAGATTGGAG	15	+	90844876-90844925	15q26.1d	Homo sapiens chromosome 15 open reading frame 32 (C15orf32), mRNA.				FLJ32831; MGC129837; MGC129836	FLJ32831; MGC129837; MGC129836
Homo sapiens	RefSeq	XM_940027.1	ILMN_38601	LOC650938	XM_940027.1	XM_940027.1		650938	89061408	XM_940027.1	LOC650938	XP_945120.1	ILMN_1744666	0004880451	S	53	GGCGCATGCTCTGGACTCCTGCAGCCGCCGAAACGGCCAATCGTGTTTAA					PREDICTED: Homo sapiens hypothetical protein LOC650938 (LOC650938), mRNA.					
Homo sapiens	RefSeq	XM_370934.4	ILMN_31281	LOC388210	XM_940577.2	XM_940577.2		388210	113426318	XM_940577.2	LOC388210	XP_945670.1	ILMN_1660358	0004860022	S	67	CAGAGGAGGCCATGCGGCGGCTGCAGGCCTGGGTGCCCGGGATGCCAGGC				16p13.13c	PREDICTED: Homo sapiens similar to CG15828-PA, isoform A (LOC388210), mRNA.					
Homo sapiens	RefSeq	NM_001005512.1	ILMN_179985	OR4A47	NM_001005512.1	NM_001005512.1		403253	53850667	NM_001005512.1	OR4A47	NP_001005512.1	ILMN_1797169	0005700193	S	558	CTGCACTGACACCCATGCTATTGGCCTCTTAGTGGTGGCCAATGGAGGAC	11	+	48467478-48467527	11p11.2a	Homo sapiens olfactory receptor, family 4, subfamily A, member 47 (OR4A47), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	OR11-113	OR11-113
Homo sapiens	RefSeq	NM_021971.1	ILMN_3929	GMPPB	NM_021971.1	NM_021971.1		29925	11761620	NM_021971.1	GMPPB	NP_068806.1	ILMN_2412927	0004830458	A	1044	CCTGGGACCTGGCGTGGTGGTCGAAGATGGTGTGTGTATCCGGCGGTGCA	3	-	49759480-49759529	3p21.31c	Homo sapiens GDP-mannose pyrophosphorylase B (GMPPB), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the reaction: GTP + alpha-D-mannose 1-phosphate = diphosphate + GDP-mannose [goid 4475] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	KIAA1851	KIAA1851
Homo sapiens	RefSeq	NM_021971.1	ILMN_3929	GMPPB	NM_021971.1	NM_021971.1		29925	11761620	NM_021971.1	GMPPB	NP_068806.1	ILMN_1773645	0006020228	A	1381	GACCCTGGACTTGTCATTATTTGTCTGGGGGGCACTGGGTGAAGCTGAAG	3	-	49759062-49759111	3p21.31c	Homo sapiens GDP-mannose pyrophosphorylase B (GMPPB), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the reaction: GTP + alpha-D-mannose 1-phosphate = diphosphate + GDP-mannose [goid 4475] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	KIAA1851	KIAA1851
Homo sapiens	Unigene	Hs.42419	ILMN_72614	HS.42419	Hs.42419		Hs.42419		18988830	BM678934			ILMN_1827517	0006330370	S	407	TCCTATGTCACACCATGCAACAGCCCCCAGCAGCAGTAGGCCAGAGTTGT	3	+	121594223-121594272		UI-E-EO0-ahx-f-05-0-UI.s1 UI-E-EO0 Homo sapiens cDNA clone UI-E-EO0-ahx-f-05-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003525.2	ILMN_15418	HIST1H2BI	NM_003525.2	NM_003525.2		8346	21166387	NM_003525.2	HIST1H2BI	NP_003516.1	ILMN_1775925	0005340204	S	386	GTTACCTGGGTAAAAGCGCTAACGACCCAAAGGCTCTTCTAAGAGCCACC	6	+	26273589-26273638	6p22.1d	Homo sapiens histone cluster 1, H2bi (HIST1H2BI), mRNA.				H2B/k; H2BFK	H2B/k; H2BFK
Homo sapiens	RefSeq	XM_933618.1	ILMN_38042	LOC646437	XM_933618.1	XM_933618.1		646437	89028154	XM_933618.1	LOC646437	XP_938711.1	ILMN_1729055	0006550040	S	181	CGCGGTCCCCGCCCTCTCCGGCTCCCGCGACTCCCTCCCCCAGCTCCCAC	8	+	81653103-81653145:81653545-81653551	8q21.13b	PREDICTED: Homo sapiens hypothetical LOC646437 (LOC646437), mRNA.					
Homo sapiens	RefSeq	NM_023925.3	ILMN_1116	CAPRIN2	NM_023925.3	NM_023925.3		65981	50428936	NM_023925.3	CAPRIN2	NP_076414.2	ILMN_2345739	0006200682	A	3488	GGACAAGGAGACTCCCGTAGCATGACCCCTGTGGATGTGCCAGTGACAAA	12	-	30863283-30863332	12p11.21b	Homo sapiens caprin family member 2 (CAPRIN2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14593112] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 14593112] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 14593112] [evidence IDA]		MGC134848; MGC102894; MGC134847; FLJ11391; caprin-2; C1QDC1; EEG-1; FLJ22569; EEG1	MGC134848; FLJ22569; EEG1; MGC102894; MGC134847; FLJ11391; caprin-2; C1QDC1; EEG-1
Homo sapiens	RefSeq	NM_004613.2	ILMN_170198	TGM2	NM_004613.2	NM_004613.2		7052	39777596	NM_004613.2	TGM2	NP_004604.2	ILMN_1705750	0001580435	I	3605	CTCCTGCTCTTTCTACATGACTGGGCCTCCCTTGGGCTGGAAGAATTGGG	20	-	36757130-36757179	20q11.23c	Homo sapiens transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) (TGM2), transcript variant 1, mRNA.		The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence ISS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442029] [evidence IPI]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TGC; TG2	TGC; TG2
Homo sapiens	RefSeq	NM_000483.3	ILMN_26723	APOC2	NM_000483.3	NM_000483.3		344	32130517	NM_000483.3	APOC2	NP_000474.2	ILMN_1802923	0003800403	S	395	AAGGGAGAGGAGTAACAGCCAGACCCCCCATCAGTGGACAAGGGGAGAGT	19	+	45452492-45452506:45452507-45452541	19q13.32a	Homo sapiens apolipoprotein C-II (APOC2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 4345202] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10727238] [evidence IDA]; A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver [goid 34361] [pmid 8245722] [evidence IDA]; A lipoprotein particle, rich in cholesterol esters and low in triglycerides that is typically composed of APOB100 and APOE and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm. LDL particles are formed from VLDL particles (via IDL) by the loss of triacylglycerol and gain of cholesterol ester. They transport endogenous cholesterol (and to some extent triglycerides) from peripheral tissues back to the liver [goid 34362] [pmid 8245722] [evidence IDA]; A triglyceride-rich lipoprotein particle that typically contains APOB100, APOE and APOCs and has a density of 1.006-1.019 g/ml and a diameter of between 25-30 nm. IDL particles are found in blood and are formed by the delipidation of very-low-density lipoprotein particles (VLDL). IDL particles are removed from blood by the liver, following binding to the APOE receptor, or are converted to low-density lipoprotein (LDL) [goid 34363] [pmid 17336988] [evidence IDA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]	The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [pmid 10727238] [evidence IDA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [pmid 10727238] [evidence IDA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [pmid 11162594] [evidence IDA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [pmid 11162594] [evidence IDA]; Any process that activates or increases the activity of the enzyme lipoprotein lipase [goid 51006] [pmid 15878877] [evidence IDA]; Any process that activates or increases the activity of the enzyme lipoprotein lipase [goid 51006] [pmid 10727238] [evidence IDA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [pmid 10727238] [evidence IDA]; Increases the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a glycerophospholipid [goid 16004] [pmid 10727238] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8245722] [evidence IMP]; Interacting selectively with any phospholipase, enzymes that catalyze of the hydrolysis of a glycerophospholipid [goid 43274] [pmid 10727238] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 8245722] [evidence IMP]; Increases the activity of a lipoprotein lipase, an enzyme that catalyzes of the hydrolysis of a lipid within a lipoprotein [goid 60230] [pmid 10727238] [evidence IDA]	MGC75082	MGC75082
Homo sapiens	RefSeq	XM_941665.1	ILMN_43061	LOC387763	XM_941665.2	XM_941665.2		387763	113422827	XM_941665.2	LOC387763	XP_946758.2	ILMN_1747366	0002100324	I	348	AGACTTGGGGATCCCAGAAGGGACAGTGCCCGCCCAGTCGCGGCGATTGA				11p11.2e	PREDICTED: Homo sapiens hypothetical LOC387763 (LOC387763), mRNA.					
Homo sapiens	RefSeq	XM_373497.4	ILMN_43061	LOC387763	XM_941665.2	XM_941665.2		387763	113422827	XM_941665.2	LOC387763	XP_946758.2	ILMN_1677402	0002710064	A	1672	CCCCAGCGCACACCCATTCACACTCACGCCAACACTCTCGCTGAACACTT				11p11.2e	PREDICTED: Homo sapiens hypothetical LOC387763 (LOC387763), mRNA.					
Homo sapiens	RefSeq	XM_001717205.1	ILMN_349448	LOC100128693	XM_001717205.1	XM_001717205.1		100128693	169171577	XM_001717205.1	LOC100128693	XP_001717257.1	ILMN_3193231	0000360739	A	61	CCTCAGTTTCCTGAGTAGCTGGGACTACAGGCATGGGCCACCACACCCGG				7q36.1b	PREDICTED: Homo sapiens hypothetical protein LOC100128693 (LOC100128693), mRNA.					
Homo sapiens	RefSeq	NM_002020.1	ILMN_170322	LOC143666	XM_001127524.1	XM_001127524.1		143666	113422227	XM_001127524.1	LOC143666	XP_001127524.1	ILMN_1651296	0002600136	I	297	TATCCAGCCTCCCACAAGAAGCTGGTGGAGCAGAGTGTTCCCTGACTCCT	11	+	564104-564153	11p15.5d	PREDICTED: Homo sapiens hypothetical protein LOC143666 (LOC143666), mRNA.					PCL; FLT41; VEGFR3
Homo sapiens	RefSeq	XM_379309.3	ILMN_44302	LOC285577	XM_379309.3	XM_379309.3		285577	88982433	XM_379309.3	LOC285577	XP_379309.2	ILMN_1783547	0006370670	S	2692	GAGTCCATATGAAGCCTCAGCCCAGGGGAGGGTCTACCTGTCCAGGAGGC	5	-	3470670-3470719		PREDICTED: Homo sapiens hypothetical protein LOC285577 (LOC285577), mRNA.					
Homo sapiens	RefSeq	NM_024666.3	ILMN_1472	AAGAB	NM_024666.3	NM_024666.3		79719	153251314	NM_024666.3	AAGAB	NP_078942.3	ILMN_3237396	0005490500	S	2622	CCACCAGCCCATCAGTGTTTCTTTGAGGTGATTGCATTAGGGAAGTTGGC	15	-	67493540-67493589	15q22.33c-q23a	Homo sapiens alpha- and gamma-adaptin binding protein (AAGAB), mRNA.				DKFZp686G08119; DKFZp667D2317	DKFZp667D2317; DKFZp686G08119
Homo sapiens	RefSeq	NM_025030.1	ILMN_727	FLJ20972	NM_025030.1	NM_025030.1		80098	13376553	NM_025030.1	FLJ20972	NP_079306.1	ILMN_1652701	0005270014	S	1480	ATTATCATTTACCCTCTTCCTGTGGTTTTGGGAGGCCACCCTCTACCTTC	1	+	42775677-42775726	1p34.2b	Homo sapiens hypothetical protein FLJ20972 (FLJ20972), mRNA.					
Homo sapiens	RefSeq	NR_003003.2	ILMN_169708	SCARNA17	NR_003003.2	NR_003003.2		677769	93352543	NR_003003.2	SCARNA17		ILMN_3245822	0004670382	S	111	CTTTCGGGTCCCCATTGCAGCCCCCGGATGAGCCCGCAGTATTTTCCTTA	18	+	45594501-45594550	18q21.1f	Homo sapiens small Cajal body-specific RNA 17 (SCARNA17), guide RNA.				U91	U91
Homo sapiens	RefSeq	XM_001717725.1	ILMN_351110	LOC646993	XM_001717725.1	XM_001717725.1		646993	169184026	XM_001717725.1	LOC646993	XP_001717777.1	ILMN_3294365	0003870373	M	1180	CATAGCATTCTGCTGCCTTCTTAGTTGTGGACAAAGCGGGGTCAGCTGGC				9p13.3a	PREDICTED: Homo sapiens similar to high-mobility group box 3 (LOC646993), mRNA.					
Homo sapiens	RefSeq	XM_932967.1	ILMN_45557	LOC645557	XM_932967.1	XM_932967.1		645557	88997847	XM_932967.1	LOC645557	XP_938060.1	ILMN_1675127	0003990647	S	61	ACTTCGGGAGCCCCCGGTGCTCCGGGCCCACCTGACTGGGCGTCCTCTGA	6	+	143289425-143289474		PREDICTED: Homo sapiens hypothetical protein LOC645557 (LOC645557), mRNA.					
Homo sapiens	RefSeq	NM_170709.1	ILMN_10483	SGK3	NM_170709.1	NM_170709.1		23678	25168266	NM_170709.1	SGK3	NP_733827.2	ILMN_2366703	0006510500	A	3044	TGGAGGCTGAAGTTGGAGGATGGCTTGAGCCCACGAGATGGAAGTTGCAG	8	+	67773251-67773300	8q13.1b	Homo sapiens serum/glucocorticoid regulated kinase family, member 3 (SGK3), transcript variant 2, mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10548550] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10548550] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10548550] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SGK2; CISK; DKFZp781N0293; SGKL	SGK2; CISK; DKFZp781N0293; SGKL
Homo sapiens	Unigene	Hs.565801	ILMN_118230	HS.565801	Hs.565801		Hs.565801		2841315	AA781984			ILMN_1855510	0002450598	S	103	GGTAAAGGGATTTGGGGATGCGTGGCTGGGTGGTTCTGTCTCCAGGTCTC	22	-	31199952-31200001		ai78h04.s1 Soares_testis_NHT Homo sapiens cDNA clone 1376983 3, mRNA sequence					
Homo sapiens	Unigene	Hs.436863	ILMN_91789	HS.436863	Hs.436863		Hs.436863		18972871	BM665736			ILMN_1913498	0004880739	S	365	GAGGCCAGTTCTACCACATTCATTTCACGCCCTGGGGCTCGCACCCTTAA	19	-	37865190-37865239		UI-E-CK1-afn-b-08-0-UI.s1 UI-E-CK1 Homo sapiens cDNA clone UI-E-CK1-afn-b-08-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_032272.3	ILMN_171826	MAF1	NM_032272.4	NM_032272.4		84232	110349739	NM_032272.4	MAF1	NP_115648.2	ILMN_1713985	0001990255	S	1431	ATCCTGTGGATGCCCACTCACCCCTCAGACTCCTGCTGCCCATGCTGTGG	8	+	145162171-145162220	8q24.3g	Homo sapiens MAF1 homolog (S. cerevisiae) (MAF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase III promoter [goid 16480] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MGC31779; MGC20332; MGC39758	MGC31779; MGC20332; MGC39758
Homo sapiens	RefSeq	NM_172217.1	ILMN_6720	IL16	NM_172217.1	NM_172217.1		3603	27262656	NM_172217.1	IL16	NP_757366.1	ILMN_2290628	0001450008	I	4297	CAAGCAAGCTCCCAAGGGATGGTGCCCTGTTCTCTACCAAGCTATCCTGG	15	+	79387870-79387919	15q25.1b	Homo sapiens interleukin 16 (lymphocyte chemoattractant factor) (IL16), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9144227] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9144227] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ16806; FLJ44234; HsT19289; prIL-16; LCF; IL-16; FLJ42735	FLJ16806; FLJ44234; HsT19289; prIL-16; LCF; IL-16; FLJ42735
Homo sapiens	Unigene	Hs.538990	ILMN_104246	HS.538990	Hs.538990		Hs.538990		18999282	BI481473			ILMN_1898311	0002140615	S	93	CTGTTATCGCAAAATGGGGGAGAAGCGCCCGGCCACTCGCTACACACATC	11	+	32178921-32178970		H2RPE-2014 Human Retinal Pigment Epithelium (2) Homo sapiens cDNA 5 similar to Human DNA sequence from clone RP1-61M11 on chromosome 11p13, mRNA sequence					
Homo sapiens	RefSeq	NR_002785.2	ILMN_370649	GNASAS	NR_002785.2	NR_002785.2		149775	209413770	NR_002785.2	GNASAS		ILMN_3239955	0003850162	S	842	TCCCTGGAACCTTCTGCAGCTGTGCCTCTCCAGAGCTCCGCCTCATTAGT	20	-	57394238-57394287	20q13.32a	Homo sapiens GNAS antisense RNA (non-protein coding) (GNASAS), antisense RNA.					
Homo sapiens	RefSeq	XM_001722760.1	ILMN_352432	LOC100129532	XM_001722760.1	XM_001722760.1		100129532	169205063	XM_001722760.1	LOC100129532	XP_001722812.1	ILMN_3273222	0007330088	M	3	GTTGATGAACTGTAGTGGCGTCCACACCCGCCAGTTCATCCTCAGCGCCG				12q24.33d	PREDICTED: Homo sapiens hypothetical LOC100129532 (LOC100129532), mRNA.					
Homo sapiens	RefSeq	NM_001001435.2	ILMN_10018	CCL4L2	NM_207007.2	NM_207007.2		388372	48949836	NM_207007.2	CCL4L2	NP_996890.1	ILMN_1716276	0002970575	S	212	AACTTTGTGGTAGATTACTATGAGACCAGCAGCCTCTGCTCCCAGCCAGC	17	+	31664916-31664965	17q12b	Homo sapiens chemokine (C-C motif) ligand 4-like 2 (CCL4L2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	AT744.2; SCYA4L; CCL4L	LAG-1; AT744.2; LAG1; SCYA4L; CCL4L
Homo sapiens	RefSeq	XM_934361.1	ILMN_10018	CCL4L2	NM_207007.2	NM_207007.2		388372	48949836	NM_207007.2	CCL4L2	NP_996890.1	ILMN_1677591	0005700551	A	496	TATTGTATTAGGTGTTATTTCCATTATTTATATTAGTTTAGCCAAAGGAT	17	+	34640150-34640185:34640744-34640757	17q12b	Homo sapiens chemokine (C-C motif) ligand 4-like 2 (CCL4L2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	AT744.2; SCYA4L; CCL4L	
Homo sapiens	RefSeq	XM_001717756.1	ILMN_344273	LOC100128881	XM_001717756.1	XM_001717756.1		100128881	169210103	XM_001717756.1	LOC100128881	XP_001717808.1	ILMN_3263702	0006760674	M	573	AGCTGGGGCAACTGTTAGCTCCCCCTGACCTGTGTGATCCTACGTCCAGT	16	+	88311715-88311764	16q24.3b	PREDICTED: Homo sapiens similar to predicted protein (LOC100128881), mRNA.					
Homo sapiens	RefSeq	NM_001556.1	ILMN_9946	IKBKB	NM_001556.1	NM_001556.1		3551	41352711	NM_001556.1	IKBKB	NP_001547.1	ILMN_1727142	0001260438	S	3310	GTGCTGGGCCGGGGAGTCCCTGTCTCTCACAGCATCTAGCAGTATTATTA	8	+	42189359-42189408	8p11.21a	Homo sapiens inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta (IKBKB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9744859] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10723127] [evidence EXP]	The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9346484] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 15790681] [evidence IDA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein [goid 8384] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9346484] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9813230] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9346485] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16319058] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	IKK-beta; NFKBIKB; IKK2; FLJ40509; IKKB; MGC131801	IKK-beta; NFKBIKB; IKK2; FLJ40509; IKKB; MGC131801
Homo sapiens	RefSeq	NM_001556.1	ILMN_9946	IKBKB	NM_001556.1	NM_001556.1		3551	41352711	NM_001556.1	IKBKB	NP_001547.1	ILMN_2172588	0006660373	S	3606	GGTGAGTTTTGTTGGAGAAGAAAGTTGGAGTAGGAGACTTTCACAAGTGG	8	+	42189655-42189704	8p11.21a	Homo sapiens inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta (IKBKB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9744859] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10723127] [evidence EXP]	The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9346484] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 15790681] [evidence IDA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the reaction: ATP + IkappaB protein = ADP + IkappaB phosphoprotein [goid 8384] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9346484] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9813230] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9346485] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16319058] [evidence IPI]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	IKK-beta; NFKBIKB; IKK2; FLJ40509; IKKB; MGC131801	IKK-beta; NFKBIKB; IKK2; FLJ40509; IKKB; MGC131801
Homo sapiens	RefSeq	NM_001013736.1	ILMN_22588	FAM47C	NM_001013736.1	NM_001013736.1		442444	61966918	NM_001013736.1	FAM47C	NP_001013758.1	ILMN_1758171	0006960161	S	2332	ATCTCCACCCAGAGCTTCCCAAGCCTCGGGTATCCAGTCTCCACCTGGAG	X	+	36938722-36938771	Xp21.1a	Homo sapiens family with sequence similarity 47, member C (FAM47C), mRNA.					
Homo sapiens	RefSeq	NM_005215.1	ILMN_177441	DCC	NM_005215.2	NM_005215.2		1630	110431347	NM_005215.2	DCC	NP_005206.2	ILMN_1665748	0004250370	S	4789	CAGCCCCTGAAGTGTCTGAGGAGAGCCACAAACCAACAGAGGATTCAGCC	18	+	49307075-49307124	18q21.2b-q21.2c	Homo sapiens deleted in colorectal carcinoma (DCC), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9796814] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [pmid 8861902] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 8861902] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12011067] [evidence IPI]	CRCR1; CRC18	CRCR1; CRC18
Homo sapiens	RefSeq	NM_000096.1	ILMN_24449	CP	NM_000096.1	NM_000096.1		1356	4557484	NM_000096.1	CP	NP_000087.1	ILMN_1813206	0006940364	S	2004	AGGAGAACGGAGAGACACAGCAAACCTCTTCCCTCAAACAAGTCTTACGC	3	-	150387020-150387069	3q24f-q25.1a	Homo sapiens ceruloplasmin (ferroxidase) (CP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7708681] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [pmid 9445478] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [pmid 7708681] [evidence TAS]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_014585.3	ILMN_182851	SLC40A1	NM_014585.3	NM_014585.3		30061	31543639	NM_014585.3	SLC40A1	NP_055400.1	ILMN_2053103	0000730164	S	2982	GGGTGTAAGCCTTCAGCCTGGCAAGTTACATGTAGAAAGCCCACACTTGT	2	-	190133960-190134009	2q32.2a	Homo sapiens solute carrier family 40 (iron-regulated transporter), member 1 (SLC40A1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10747949] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10693807] [evidence TAS]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [pmid 10693807] [evidence TAS]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [pmid 10747949] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10693807] [evidence TAS]	Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [pmid 10747949] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]	IREG1; HFE4; MST079; FPN1; MTP1; MSTP079; SLC11A3	IREG1; HFE4; MST079; FPN1; MTP1; MSTP079; SLC11A3
Homo sapiens	RefSeq	XM_937553.1	ILMN_20524	LOC441795	XM_497547.1	XM_497547.1		441795	51474255	XM_497547.1	LOC441795	XP_497547.1	ILMN_1689420	0000380093	A	534	GGTGGAAGAGGAAGATGAAGACGAGGAGTTCTGTATTCTACACTCGGTGC	17	+	38054255-38054304	17q21.31a	PREDICTED: Homo sapiens similar to high-mobility group box 3 (LOC441795), mRNA.					
Homo sapiens	RefSeq	NR_003036.1	ILMN_166183	SNORD6	NR_003036.1	NR_003036.1		692075	94536758	NR_003036.1	SNORD6		ILMN_3234756	0000290220	S	10	ATGATGGGCGAAATGTTCAACTGCTCTGAAGGGGCTGAATGAAAATGGCC	11	-	93464680-93464729	11q21a	Homo sapiens small nucleolar RNA, C/D box 6 (SNORD6), small nucleolar RNA.				mgh28S-2412	mgh28S-2412
Homo sapiens	RefSeq	NM_033210.3	ILMN_25786	ZNF502	NM_033210.3	NM_033210.3		91392	34222164	NM_033210.3	ZNF502	NP_149987.2	ILMN_1655167	0001710161	S	2815	CCTAGGCTGTTGGTGTACAGAGACCAGAGGAGAGAGACACACTAGGACTA	3	+	44739872-44739921	3p21.31k	Homo sapiens zinc finger protein 502 (ZNF502), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14855; FLJ12515	FLJ14855; FLJ12515
Homo sapiens	RefSeq	XM_944683.1	ILMN_39003	LOC440422	XM_498661.3	XM_498661.3		440422	113427340	XM_498661.3	LOC440422	XP_498661.3	ILMN_1700048	0002490280	S	14	GAGAAAATGGCGGAATGGGCCTTCGCCTCCCTTTTATAACGGCTGTACTC					PREDICTED: Homo sapiens hypothetical LOC440422, transcript variant 2 (LOC440422), mRNA.					
Homo sapiens	RefSeq	XM_498661.2	ILMN_39003	LOC440422	XM_498661.3	XM_498661.3		440422	113427340	XM_498661.3	LOC440422	XP_498661.3	ILMN_1666881	0004590750	S	469	ATCTCAGGCCTGGCTGGCCACTCAGTATTCCTTGTCCCTGGCCTCGCAGC					PREDICTED: Homo sapiens hypothetical LOC440422, transcript variant 2 (LOC440422), mRNA.					
Homo sapiens	RefSeq	NM_020825.2	ILMN_12672	CRAMP1L	NM_020825.2	NM_020825.2		57585	62079294	NM_020825.2	CRAMP1L	NP_065876.2	ILMN_1660551	0005340066	S	6996	AAAACCCACAGCACACCCTTCGCGGCTGTCAGCGCTCTCCTGATGTCACA	16	+	1667493-1667542	16p13.3e	Homo sapiens Crm, cramped-like (Drosophila) (CRAMP1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	TCE4	TCE4
Homo sapiens	RefSeq	NR_002954.1	ILMN_176609	SNORA12	NR_002954.1	NR_002954.1		677800	91680821	NR_002954.1	SNORA12		ILMN_3238435	0006510156	S	94	GACGGAGATATCTCTCTTAAGCCTTTCCTGCATCAGAGAATGGCTCCCAC	10	-	101996916-101996965	10q24.2c	Homo sapiens small nucleolar RNA, H/ACA box 12 (SNORA12), small nucleolar RNA.				U108	U108
Homo sapiens	RefSeq	NM_052878.1	ILMN_25124	C19ORF36	NM_052878.1	NM_052878.1		113177	39930482	NM_052878.1	C19orf36	NP_443110.1	ILMN_1788337	0005420121	I	1663	GACATCCCAGGCACGAGGGTGTCGTGGATGTGGCCACACATAGGACCACA	19	+	2050112-2050161	19p13.3h	Homo sapiens chromosome 19 open reading frame 36 (C19orf36), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			IMAGE:4215339	IMAGE:4215339
Homo sapiens	RefSeq	NM_003938.4	ILMN_12013	AP3D1	NM_003938.5	NM_003938.5		8943	117553579	NM_003938.5	AP3D1	NP_003929.4	ILMN_1764945	0004210612	S	4489	AGCAGCGGACCTGGGCTGTTCTGTGTTGAAGGAGTGTGCCCAGTGCCCTT	19	-	2101637-2101686	19p13.3h-p13.3g	Homo sapiens adaptor-related protein complex 3, delta 1 subunit (AP3D1), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9151686] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The chemical reactions and pathways resulting in the formation of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye [goid 6726] [pmid 9303295] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 9151686] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses lipid antigen of exogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family [goid 48007] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of natural killer T cell differentiation [goid 51138] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9303295] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	hBLVR; ADTD	hBLVR; ADTD
Homo sapiens	RefSeq	XM_930297.1	ILMN_31484	LOC647250	XM_930297.1	XM_930297.1		647250	88943676	XM_930297.1	LOC647250	XP_935390.1	ILMN_1796484	0007210364	S	121	GGCGCAGGGAAACAGGAACTGGGGGCACAGCATCCTACTGCATGGGGGCA	1	-	201765292-201765341	1q32.1e	PREDICTED: Homo sapiens hypothetical LOC647250 (LOC647250), mRNA.					
Homo sapiens	RefSeq	XM_001719272.1	ILMN_350708	LOC100132948	XM_001719272.1	XM_001719272.1		100132948	169177254	XM_001719272.1	LOC100132948	XP_001719324.1	ILMN_3293843	0007570274	M	9	TGGCAAAGCAGGAGCCCTCTGTGGCAGTGCTTGGGTGTCGGGGCTCTGAG	9	+	44930324-44930373	9p11.2b	PREDICTED: Homo sapiens similar to Protein FAM27A/B/C, transcript variant 1 (LOC100132948), mRNA.					
Homo sapiens	RefSeq	NM_000520.2	ILMN_27287	HEXA	NM_000520.3	NM_000520.3		3073	119395761	NM_000520.3	HEXA	NP_000511.1	ILMN_1813911	0006650240	S	1932	AGGCTGGAGTCAGTGTCTGCCCCTGAGGTCTTTTAAGTTGAGGGCTGGGA	15	-	70423170-70423219	15q24.1a	Homo sapiens hexosaminidase A (alpha polypeptide) (HEXA), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of ganglioside, a ceramide oligosaccharide carrying, in addition to other sugar residues, one or more sialic residues [goid 6689] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IEA]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IEA]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]	Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides [goid 4563] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 6230359] [evidence IDA]	TSD; MGC99608	TSD; MGC99608
Homo sapiens	RefSeq	NM_032800.1	ILMN_26304	C1ORF198	NM_032800.1	NM_032800.1		84886	14249477	NM_032800.1	C1orf198	NP_116189.1	ILMN_1657683	0001260576	S	3382	GATTTTGGATTCTCCACCTCCCCCCAGTCTCTGCACCTGGGATTCAGCTC	1	-	229039792-229039841	1q42.2a	Homo sapiens chromosome 1 open reading frame 198 (C1orf198), mRNA.				FLJ14525; FLJ16283; DKFZp667D152; MGC10710; FLJ38847	FLJ14525; FLJ16283; DKFZp667D152; MGC10710; FLJ38847
Homo sapiens	Unigene	Hs.385516	ILMN_89046	HS.385516	Hs.385516		Hs.385516		22902422	BC037739			ILMN_1896277	0007050292	S	2557	CTACCAGTAAGGGACACAGCAGAAGCTCCACCCCACTTGGTGACTCTCAG	10	+	122935164-122935213		Homo sapiens cDNA clone IMAGE:4829277					
Homo sapiens	RefSeq	NM_018283.1	ILMN_9527	NUDT15	NM_018283.1	NM_018283.1		55270	8922791	NM_018283.1	NUDT15	NP_060753.1	ILMN_2172202	0003450370	S	1844	AGGCTGAATGCAAAAGCAGATACAAGATTCCAGCTTTCGTCTGTCATCAG	13	+	47519105-47519154	13q14.2b	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 15 (NUDT15), mRNA.			Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	RP11-90M2.1; MTH2; FLJ10956; MGC104352	RP11-90M2.1; MTH2; FLJ10956; MGC104352
Homo sapiens	RefSeq	NM_018283.1	ILMN_9527	NUDT15	NM_018283.1	NM_018283.1		55270	8922791	NM_018283.1	NUDT15	NP_060753.1	ILMN_1751403	0003940136	S	1339	TATGAAGAGATTCGTCTAGAGCAGTGGTTGTCAAAGTGTGGTCTGGGGGG	13	+	47518600-47518649	13q14.2b	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 15 (NUDT15), mRNA.			Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	RP11-90M2.1; MTH2; FLJ10956; MGC104352	RP11-90M2.1; MTH2; FLJ10956; MGC104352
Homo sapiens	RefSeq	NM_015024.2	ILMN_26591	XPO7	NM_015024.2	NM_015024.2		23039	22095350	NM_015024.2	XPO7	NP_055839.2	ILMN_2174884	0004560730	S	3639	GCCACCCAAGTGGGGAGAACCCCTAGTGTCCTGCCATAACCTGCCTTGTA	8	+	21918820-21918869	8p21.3b	Homo sapiens exportin 7 (XPO7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11071879] [evidence IDA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 11024021] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11071879] [evidence IDA]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of a protein from the nucleus into the cytoplasm [goid 6611] [pmid 11024021] [evidence IDA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Combining with a nuclear export signal to initiate a change in cell activity [goid 5049] [pmid 11024021] [evidence IDA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	KIAA0745; RANBP16	RANBP16; KIAA0745
Homo sapiens	RefSeq	XM_928726.1	ILMN_44676	LOC645718	XM_928726.1	XM_928726.1		645718	89027837	XM_928726.1	LOC645718	XP_933819.1	ILMN_1789983	0001980114	S	2649	CTTCAGTGCCTGGCTCCTTTTTCAGCTCTCTCCCGGACGCCTGTGAGGCT	8	-	7654479-7654501:7654534-7654560		PREDICTED: Homo sapiens hypothetical protein LOC645718 (LOC645718), mRNA.					
Homo sapiens	Unigene	Hs.550960	ILMN_110423	HS.550960	Hs.550960		Hs.550960		13734471	BG212784			ILMN_1880321	0004280465	S	270	GTGCTGGAAGCCAGAAGATGTTGGGGAAGCTGGCAAAGAGAATACCTGAG	2	-	198760960-198761009		RST32379 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_001351.2	ILMN_10973	DAZL	NM_001351.2	NM_001351.2		1618	25121977	NM_001351.2	DAZL	NP_001342.2	ILMN_1691636	0006620747	S	2316	CCACAGTCTTTCGTTTCCAGCCTTTGTCACTAGTCTTTGAGGAGGTTTGC	3	-	16628983-16629032	3p24.3d	Homo sapiens deleted in azoospermia-like (DAZL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9288969] [evidence TAS]; Several ribosomes bound to one mRNA [goid 5844] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [pmid 9288969] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of meiosis [goid 45836] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of translational initiation [goid 45948] [pmid 16001084] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8968755] [evidence TAS]; Interacting selectively with the 3' untranslated region of an mRNA molecule [goid 3730] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16001084] [evidence IPI]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [pmid 16001084] [evidence IDA]	DAZLA; MGC26406; DAZH; DAZL1; SPGYLA	DAZLA; MGC26406; DAZH; DAZL1; SPGYLA
Homo sapiens	RefSeq	NM_001351.2	ILMN_10973	DAZL	NM_001351.2	NM_001351.2		1618	25121977	NM_001351.2	DAZL	NP_001342.2	ILMN_2195695	0004230086	S	2578	TGTAGTTACTGTGAGCCATATTACTAGTGCCCCCTAGGGTCTATAATTCC	3	-	16628721-16628770	3p24.3d	Homo sapiens deleted in azoospermia-like (DAZL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9288969] [evidence TAS]; Several ribosomes bound to one mRNA [goid 5844] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [pmid 9288969] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of meiosis [goid 45836] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of translational initiation [goid 45948] [pmid 16001084] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8968755] [evidence TAS]; Interacting selectively with the 3' untranslated region of an mRNA molecule [goid 3730] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16001084] [evidence IPI]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [pmid 16001084] [evidence IDA]	DAZLA; MGC26406; DAZH; DAZL1; SPGYLA	DAZLA; MGC26406; DAZH; DAZL1; SPGYLA
Homo sapiens	RefSeq	NM_012391.1	ILMN_27290	SPDEF	NM_012391.1	NM_012391.1		25803	6912579	NM_012391.1	SPDEF	NP_036523.1	ILMN_2161330	0000940075	S	1713	GCAGAGCCTACAGAAGGGCAGTGACTCGACAAAGGCCACAGGCAGTCCAG	6	-	34613689-34613738	6p21.31e	Homo sapiens SAM pointed domain containing ets transcription factor (SPDEF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10625666] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10625666] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	bA375E1.3; PDEF; RP11-375E1__A.3	bA375E1.3; PDEF; RP11-375E1__A.3
Homo sapiens	RefSeq	XM_944179.1	ILMN_42039	LOC650407	XM_944179.1	XM_944179.1		650407	88999379	XM_944179.1	LOC650407	XP_949272.1	ILMN_1680587	0006510220	S	145	GCTGGTAATCCATGAATGCCGAAGAGTGTGGAGAACTCCAGAAGGACAGG					PREDICTED: Homo sapiens hypothetical protein LOC650407 (LOC650407), mRNA.					
Homo sapiens	RefSeq	XM_001717397.1	ILMN_348908	LOC729438	XM_001717397.1	XM_001717397.1		729438	169171161	XM_001717397.1	LOC729438	XP_001717449.1	ILMN_3228094	0002600445	A	662	AGGAAGGATTCCTAGAGCTGCCCTCCTCGGAGCACCTGAGTGTGGCAGAT	7	-	74652543-74652578:74662119-74662132	7q11.23d	PREDICTED: Homo sapiens similar to opposite strand transcription unit to Stag3 (LOC729438), mRNA.					
Homo sapiens	RefSeq	NM_012171.1	ILMN_18131	TSPAN17	NM_012171.1	NM_012171.1		26262	54859559	NM_012171.1	TSPAN17	NP_036303.1	ILMN_1777881	0003710609	A	2514	TCCTGGGCCCCTGACAGGCGCTGGCTGTGAGTGGTTTGTACATGCTACAA	5	+	176018591-176018640	5q35.2d	Homo sapiens tetraspanin 17 (TSPAN17), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FBX23; MGC14859; TM4SF17; FBXO23; MGC71255	FBX23; MGC14859; TM4SF17; MGC71255; FBXO23
Homo sapiens	Unigene	Hs.542197	ILMN_106174	HS.542197	Hs.542197		Hs.542197		4875183	AI674703			ILMN_1873823	0000520170	S	217	TAAATGTGACAGTGCAGGCTCGGTTTTCAGGGACAGGAGGCAGGGTCCGG	2	-	9733953-9734002		wd19d12.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2328599 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000015.1	ILMN_15024	NAT2	NM_000015.2	NM_000015.2		10	116295259	NM_000015.2	NAT2	NP_000006.2	ILMN_1670903	0000620626	S	1191	GGCATTTTAAGGATGGCCTGTGATTATCTTGGGAAGCAGAGTGATTCATG	8	+	18258597-18258646	8p22a	Homo sapiens N-acetyltransferase 2 (arylamine N-acetyltransferase) (NAT2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1559981] [evidence EXP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [evidence IEA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [pmid 2340091] [evidence TAS]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AAC2	AAC2
Homo sapiens	RefSeq	NM_004724.2	ILMN_22056	ZW10	NM_004724.2	NM_004724.2		9183	17136150	NM_004724.2	ZW10	NP_004715.1	ILMN_1712556	0002970368	S	2696	TGCAGGCCCTAGCTTTGGAACGAGGAATTGGGAGATTCCAGGAGTCAGGG	11	-	113604047-113604096	11q23.2a	Homo sapiens ZW10, kinetochore associated, homolog (Drosophila) (ZW10), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [pmid 11146660] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15485811] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15029241] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the spindle microtubules that attach to the kinetochores of chromosomes by their plus ends, and maneuver the chromosomes during mitotic or meiotic chromosome segregation [goid 5828] [pmid 11146660] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [pmid 11146660] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 11146660] [evidence IDA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 15029241] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 11146660] [evidence IDA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [pmid 11146660] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 9298984] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12686595] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11146660] [evidence IPI]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [pmid 9700164] [evidence TAS]	MGC149821; KNTC1AP; HZW10	MGC149821; KNTC1AP; HZW10
Homo sapiens	RefSeq	XM_001716976.1	ILMN_341726	LOC727857	XM_001716976.1	XM_001716976.1		727857	169211244	XM_001716976.1	LOC727857	XP_001717028.1	ILMN_3283846	0005270327	M	799	GGCAAGAGGCTCTCCAAGATCGCCACGCTGCGCAGGGCCATCCACCGCAT				17p13.3e	PREDICTED: Homo sapiens class II basic helix-loop-helix protein (LOC727857), partial mRNA.					
Homo sapiens	RefSeq	NM_009589.2	ILMN_165491	ARSD	NM_001669.2	NM_001669.2		414	71852583	NM_001669.2	ARSD	NP_001660.2	ILMN_1684956	0004230609	A	811	CTCCTCCTTCGGGTTTGTGCGACGCTGGAACTGTATCCTGATGAGAAACC	X	-	2846043-2846092	Xp22.33c	Homo sapiens arylsulfatase D (ARSD), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 7720070] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_001669.2	ILMN_165491	ARSD	NM_001669.2	NM_001669.2		414	71852583	NM_001669.2	ARSD	NP_001660.2	ILMN_1684873	0006580689	I	4890	CCTCAGGACTTGCAAAAACGGGTCTCAGCATGCCTTCCCAGAGCCATGAG	X	-	2833306-2833355	Xp22.33c	Homo sapiens arylsulfatase D (ARSD), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 7720070] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_182503.1	ILMN_12769	DEADC1	NM_182503.1	NM_182503.1		134637	32698844	NM_182503.1	DEADC1	NP_872309.1	ILMN_1786688	0002230722	S	3096	ACTGCAGATTGGAGGGCAGGACCACTGAGGGTGTCATAGACATTAGCTCT	6	-	143789167-143789216	6q24.2a	Homo sapiens deaminase domain containing 1 (DEADC1), mRNA.				dJ20N2.1; DKFZp686L1118	dJ20N2.1; DKFZp686L1118
Homo sapiens	RefSeq	NM_001035247.1	ILMN_15819	UFD1L	NM_001035247.1	NM_001035247.1		7353	78214517	NM_001035247.1	UFD1L	NP_001030324.1	ILMN_2367458	0001260475	A	1063	GGCTTTTAGTTACTGGCACTGACAGGGACGAGCCTCATCAGAGAATACTC	22	-	17818089-17818138	22q11.21c	Homo sapiens ubiquitin fusion degradation 1 like (yeast) (UFD1L), transcript variant 2, mRNA.		The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10024240] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9063746] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [pmid 9063746] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17681147] [evidence IPI]	UFD1	UFD1
Homo sapiens	RefSeq	NM_005659.4	ILMN_15819	UFD1L	NM_001035247.1	NM_001035247.1		7353	78214517	NM_001035247.1	UFD1L	NP_001030324.1	ILMN_1665737	0000730100	S	1202	TTGGGGAAAGACAAAGAGCTGTCCCTGAGGGCCTGTAGATAGCTGCCTCC	22	-	17817950-17817999	22q11.21c	Homo sapiens ubiquitin fusion degradation 1 like (yeast) (UFD1L), transcript variant 2, mRNA.		The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10024240] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9063746] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of various forms of polymeric ubiquitin sequences. Will remove ubiquitin from larger leaving groups [goid 4843] [pmid 9063746] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17681147] [evidence IPI]	UFD1	
Homo sapiens	RefSeq	XM_940610.1	ILMN_32585	LOC651453	XM_940610.1	XM_940610.1		651453	89030523	XM_940610.1	LOC651453	XP_945703.1	ILMN_1709948	0004900402	S	34	CATGGCTCTAGGCTACCCTATGGCCATGGGCCTCTTCAAGGGCCACAAGG					PREDICTED: Homo sapiens similar to ribosomal protein L36 (LOC651453), mRNA.					
Homo sapiens	RefSeq	NM_173553.1	ILMN_24301	TRIML2	NM_173553.1	NM_173553.1		205860	27734882	NM_173553.1	TRIML2	NP_775824.1	ILMN_1666893	0000510577	S	1071	CTCCCATTGCGCCTTCCAAGGAGCTCTCAGGCCTGTGTTTTCCCTCTGTA	4	-	189249600-189249649	4q35.2b	Homo sapiens tripartite motif family-like 2 (TRIML2), mRNA.				MGC138164; MGC138166	MGC138164; MGC138166
Homo sapiens	RefSeq	XM_930196.1	ILMN_36413	LOC647169	XM_930196.2	XM_930196.2		647169	113417525	XM_930196.2	LOC647169	XP_935289.2	ILMN_1684928	0000990373	S	159	TGCCAGCAAATACAACCTGTGTGGGAAAGACATAAAGGAGAGAGCCCCAT	6	-	52750976-52751025	6p12.1d	PREDICTED: Homo sapiens similar to glutathione S-transferase alpha 3 (LOC647169), mRNA.					
Homo sapiens	RefSeq	NR_003023.1	ILMN_181454	SCARNA2	NR_003023.1	NR_003023.1		677766	93102356	NR_003023.1	SCARNA2		ILMN_3241941	0002230544	S	369	ACGAGGCCGGGCTTGTCCCCGGCCACTGATTATCGAGGCGATTCTGATCT	1	+	109444706-109444755	1p13.3b	Homo sapiens small Cajal body-specific RNA 2 (SCARNA2), guide RNA.				HBII-382; mgU2-25/61	HBII-382; mgU2-25/61
Homo sapiens	RefSeq	NM_001054.2	ILMN_13835	SULT1A2	NM_177528.1	NM_177528.1		6799	29550892	NM_177528.1	SULT1A2	NP_803564.1	ILMN_1798528	0002480014	A	803	ACCCTGGGACCTGGGAAAGCTTCCTGGAGAAGTTCATGGCTGGAGAAGTG	16	-	28604665-28604667:28604763-28604809	16p11.2e	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2 (SULT1A2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9309] [pmid 9119390] [evidence TAS]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC142287; MGC142289; ST1A2; TSPST2; P-PST; STP2; HAST4	MGC142287; MGC142289; ST1A2; TSPST2; P-PST; STP2; HAST4
Homo sapiens	RefSeq	NM_177528.1	ILMN_13835	SULT1A2	NM_177528.1	NM_177528.1		6799	29550892	NM_177528.1	SULT1A2	NP_803564.1	ILMN_1790159	0003440397	I	1	GTTTGTCCTGGAGCCCAGATGGACTGTGGCCGGGCAAGTGGATCACAGGC	16	-	28607751-28607800	16p11.2e	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2 (SULT1A2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9309] [pmid 9119390] [evidence TAS]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC142287; MGC142289; ST1A2; TSPST2; P-PST; STP2; HAST4	MGC142287; MGC142289; ST1A2; TSPST2; P-PST; STP2; HAST4
Homo sapiens	RefSeq	NM_207443.1	ILMN_12880	FLJ45244	NM_207443.1	NM_207443.1		400242	46409509	NM_207443.1	FLJ45244	NP_997326.1	ILMN_1764619	0006330653	S	2028	GCTGTGGTCAGTGGCTTAGCTCGGACAAGGAGATGAGAGCCCATGTGTTG	14	+	94715720-94715769	14q32.13b	Homo sapiens FLJ45244 protein (FLJ45244), mRNA.					
Homo sapiens	RefSeq	NM_014841.1	ILMN_15248	SNAP91	NM_014841.1	NM_014841.1		9892	7662227	NM_014841.1	SNAP91	NP_055656.1	ILMN_1733648	0007570647	S	4320	AACCCAGTGCATGTACGCCCTCTGAGATGCAATAAACACCTTGAACAAAG				6q14.2b	Homo sapiens synaptosomal-associated protein, 91kDa homolog (mouse) (SNAP91), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; A membrane coat found on coated pits and some coated vesicles; consists of polymerized clathrin triskelions, each comprising three clathrin heavy chains and three clathrin light chains, linked to the membrane via one of the AP adaptor complexes [goid 30118] [evidence IEA]	The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [evidence IEA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence IEA]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [evidence IEA]	AP180; CALM; DKFZp781O0519; KIAA0656	AP180; CALM; DKFZp781O0519; KIAA0656
Homo sapiens	RefSeq	NM_000155.2	ILMN_1433	GALT	NM_000155.2	NM_000155.2		2592	22165415	NM_000155.2	GALT	NP_000146.2	ILMN_1657475	0005690750	I	1155	AGGTTCATTACCACCTGGGGCAGAAGGACAGGGAGACAGCAACCATCGCC	9	+	34640394-34640443	9p13.3c	Homo sapiens galactose-1-phosphate uridylyltransferase (GALT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1897530] [evidence EXP]	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [pmid 1427861] [evidence TAS]	Catalysis of the reaction: UDP-glucose + alpha-D-galactose 1-phosphate = alpha-D-glucose 1-phosphate + UDP-galactose [goid 8108] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: UDP-glucose + alpha-D-galactose 1-phosphate = alpha-D-glucose 1-phosphate + UDP-galactose [goid 8108] [evidence IEA]; Catalysis of the reaction: UDP-glucose + alpha-D-galactose 1-phosphate = alpha-D-glucose 1-phosphate + UDP-galactose [goid 8108] [pmid 1897530] [evidence EXP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_000155.2	ILMN_1433	GALT	NM_000155.2	NM_000155.2		2592	22165415	NM_000155.2	GALT	NP_000146.2	ILMN_1706005	0006520669	A	947	TTTCCCTACTCCATGGGCTGGCATGGGGCTCCCACAGGATCAGAGGCTGG	9	+	34639054-34639078:34639407-34639431	9p13.3c	Homo sapiens galactose-1-phosphate uridylyltransferase (GALT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1897530] [evidence EXP]	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [pmid 1427861] [evidence TAS]	Catalysis of the reaction: UDP-glucose + alpha-D-galactose 1-phosphate = alpha-D-glucose 1-phosphate + UDP-galactose [goid 8108] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: UDP-glucose + alpha-D-galactose 1-phosphate = alpha-D-glucose 1-phosphate + UDP-galactose [goid 8108] [evidence IEA]; Catalysis of the reaction: UDP-glucose + alpha-D-galactose 1-phosphate = alpha-D-glucose 1-phosphate + UDP-galactose [goid 8108] [pmid 1897530] [evidence EXP]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_032833.2	ILMN_9582	PPP1R15B	NM_032833.2	NM_032833.2		84919	41282220	NM_032833.2	PPP1R15B	NP_116222.2	ILMN_1670664	0005670609	S	4739	AGCCTCCTTGGAAGAAGTGATCAGAAGGTGATAAGAAGGACAGAAAGGAC	1	-	202639576-202639625	1q32.1f	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 15B (PPP1R15B), mRNA.	A protein complex that possesses magnesium-dependent protein serine/threonine phosphatase (AMD phosphatase) activity, and consists of a catalytic subunit and one or more regulatory subunits that dictates the phosphatase's substrate specificity, function, and activity [goid 164] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IEA]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]	FLJ14744	FLJ14744
Homo sapiens	RefSeq	NM_032833.2	ILMN_9582	PPP1R15B	NM_032833.2	NM_032833.2		84919	41282220	NM_032833.2	PPP1R15B	NP_116222.2	ILMN_2106931	0006370156	S	5075	GGAAGGTAAAGTTAGGGGACTAGAAGACTCTAAATTGGCTTCTACAGATC	1	-	202639240-202639289	1q32.1f	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 15B (PPP1R15B), mRNA.	A protein complex that possesses magnesium-dependent protein serine/threonine phosphatase (AMD phosphatase) activity, and consists of a catalytic subunit and one or more regulatory subunits that dictates the phosphatase's substrate specificity, function, and activity [goid 164] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IEA]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]	FLJ14744	FLJ14744
Homo sapiens	RefSeq	NM_018963.3	ILMN_8919	BRWD1	NM_018963.3	NM_018963.3		54014	38026942	NM_018963.3	BRWD1	NP_061836.2	ILMN_2296011	0001050553	I	8575	ATTACTGATCCCCAATATGTTGATACACAGGTGAGAAAGGGAAGAATTCC	21	-	40557429-40557478	21q22.2a-q22.2b	Homo sapiens bromodomain and WD repeat domain containing 1 (BRWD1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	C21orf107; FLJ43918; N143; WDR9	C21orf107; FLJ43918; WDR9; N143
Homo sapiens	RefSeq	NM_018963.3	ILMN_8919	BRWD1	NM_018963.3	NM_018963.3		54014	38026942	NM_018963.3	BRWD1	NP_061836.2	ILMN_1761915	0006200041	I	6921	GGAAGAGTAGCAGAAAACTGCCCCATCGAAATGCTTCTGCTGCGGCTAAG	21	-	40559083-40559132	21q22.2a-q22.2b	Homo sapiens bromodomain and WD repeat domain containing 1 (BRWD1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	C21orf107; FLJ43918; N143; WDR9	C21orf107; FLJ43918; WDR9; N143
Homo sapiens	RefSeq	NM_001033028.1	ILMN_6477	CYFIP1	NM_001033028.1	NM_001033028.1		23191	74271906	NM_001033028.1	CYFIP1	NP_001028200.1	ILMN_2355463	0006420239	A	2662	TCATCACCATCCTGGATAAGTACCTGAAGTCAGGCGACGGGGAGGGCACG	15	+	20554372-20554421	15q11.2c	Homo sapiens cytoplasmic FMR1 interacting protein 1 (CYFIP1), transcript variant 2, mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [evidence ISS]; Long distance growth of a single process [goid 48675] [pmid 16260607] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16260607] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence ISS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISS]	FLJ45151; SHYC; P140SRA-1	FLJ45151; SHYC; P140SRA-1
Homo sapiens	RefSeq	NM_001033028.1	ILMN_6477	CYFIP1	NM_001033028.1	NM_001033028.1		23191	74271906	NM_001033028.1	CYFIP1	NP_001028200.1	ILMN_2355462	0004200343	A	2772	GGGCACGCGCTGCACTCCGTAACTCAACATGGCATGCCTTTCTCTCCGTA	15	+	20554482-20554531	15q11.2c	Homo sapiens cytoplasmic FMR1 interacting protein 1 (CYFIP1), transcript variant 2, mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [evidence ISS]; Long distance growth of a single process [goid 48675] [pmid 16260607] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16260607] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence ISS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISS]	FLJ45151; SHYC; P140SRA-1	FLJ45151; SHYC; P140SRA-1
Homo sapiens	RefSeq	NM_001033028.1	ILMN_6477	CYFIP1	NM_001033028.1	NM_001033028.1		23191	74271906	NM_001033028.1	CYFIP1	NP_001028200.1	ILMN_1752432	0004210221	I	358	TGGAGAGGCTCTTGCATGCGGTTAACACGTTTCTGAGGCAGTCGTGCACC	15	+	20507553-20507602	15q11.2c	Homo sapiens cytoplasmic FMR1 interacting protein 1 (CYFIP1), transcript variant 2, mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence ISS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [evidence ISS]; Long distance growth of a single process [goid 48675] [pmid 16260607] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16260607] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence ISS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence ISS]	FLJ45151; SHYC; P140SRA-1	FLJ45151; SHYC; P140SRA-1
Homo sapiens	Unigene	Hs.563550	ILMN_116383	HS.563550	Hs.563550		Hs.563550		20359962	BQ184411			ILMN_1890005	0004210682	S	451	GGCATTGGGTAAGGGATTGGTCGGGGGGACTGGTTATTAGCAGATGGATG					UI-E-EJ1-ajs-l-10-0-UI.s1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajs-l-10-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.563552	ILMN_116385	HS.563552	Hs.563552		Hs.563552		8470849	BE080562			ILMN_1846002	0007400487	S	227	CAGCATGTAGGGCAGTGCTTGCACGTAGCATCTGGTGCCTAACCAGTGTT	8	-	56954182-56954182:56954184-56954232		QV1-BT0630-040400-132-d11 BT0630 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_020353.1	ILMN_10535	PLSCR4	NM_020353.1	NM_020353.1		57088	9966818	NM_020353.1	PLSCR4	NP_065086.1	ILMN_1757338	0004120019	S	2554	GCCTGAGTGTTCTTAGATGGGGTTATTCTGAGATGAGGGTCTTAGCCTAC	3	-	147393419-147393468	3q24c-q24d	Homo sapiens phospholipid scramblase 4 (PLSCR4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence NAS]; The process by which all major lipid classes are redistributed within the plasma membrane following cell activation or injury, resulting in surface exposure of phosphatidylserine (PS) and phosphatidylethanolamine (PE). Cell surface-exposed PS can serve as receptor sites for coagulation enzyme complexes, and contributes to cell clearance by the reticuloendothelial system [goid 17121] [pmid 10930526] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10930526] [evidence NAS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA];  [goid 17128] [pmid 10930526] [evidence NAS]		
Homo sapiens	Unigene	Hs.545976	ILMN_109051	HS.545976	Hs.545976		Hs.545976		6569467	AW237078			ILMN_1860084	0002120019	S	217	AGGCCAGTCTTCACCTCCATCTTCCCATTTATAAATCCTAAAGTGGGGGG	X	-	136487249-136487298		xm52h06.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2687867 3, mRNA sequence					
Homo sapiens	Unigene	Hs.582113	ILMN_134294	HS.582113	Hs.582113		Hs.582113		82859048	DR977977			ILMN_1910550	0003170037	S	10	GCGGGGAAACTCCCAGTAGGCGCTGCTGTCCAGGGAAAATGATGGGCTTT	5	-	177490038-177490084:177490087-177490089		SM011178 Brain 3 EST Homo sapiens cDNA clone ID_11178 3', mRNA sequence					
Homo sapiens	RefSeq	NR_003607.1	ILMN_308371	HSFYP1	NR_003607.1	NR_003607.1		27437	151301122	NR_003607.1	HSFYP1		ILMN_3239912	0005670224	S	1052	CTCCCTCCTTTGGGGCTGATAGTGAAACCACCTACTTTTTCCCACCAGAT	22	+	15689896-15689945	22q11.1d	Homo sapiens heat shock transcription factor, Y-linked-like pseudogene 1 (HSFYP1), non-coding RNA.					
Homo sapiens	RefSeq	XM_943086.1	ILMN_46225	KIAA1245	XM_943086.1	XM_943086.1		149013	88952356	XM_943086.1	KIAA1245	XP_948179.1	ILMN_1805735	0007050441	I	333	GTCCTGTAGGGAATGACCACAGCAGCATGTCCAGCCTTGCACTGATGCAG					PREDICTED: Homo sapiens KIAA1245, transcript variant 3 (KIAA1245), mRNA.					
Homo sapiens	RefSeq	NM_005262.2	ILMN_19764	GFER	NM_005262.2	NM_005262.2		2671	54112431	NM_005262.2	GFER	NP_005253.3	ILMN_1768055	0006940689	S	2109	TTCTGTAGAGGCTGCCCAGAGGGGCCAGGTGGCACAAATAAGAGAGGGGA	16	+	1977451-1977500	16p13.3e	Homo sapiens growth factor, augmenter of liver regeneration (GFER), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12681488] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 4 R'C(R)SH + O2 = 2 R'C(R)S-S(R)CR' + 2 H2O [goid 16972] [evidence IEA]	ALR; HERV1; HPO1; HPO; HSS; HPO2; ERV1	ALR; HPO1; HSS; HPO2; ERV1; HERV1; HPO
Homo sapiens	RefSeq	NM_015070.2	ILMN_8304	KIAA0853	NM_015070.2	NM_015070.2		23091	31982940	NM_015070.2	KIAA0853	NP_055885.2	ILMN_1763732	0003830554	S	5270	GGGTATTTTGGCAGCCCTTTCCCCTAGACATCTACCCAAATGCAGGTGTG	13	-	45435404-45435453	13q14.12b	Homo sapiens KIAA0853 (KIAA0853), mRNA.				DKFZp434D1812	DKFZp434D1812
Homo sapiens	RefSeq	NM_198530.2	ILMN_14408	MXRA7	NM_198530.2	NM_198530.2		439921	56549128	NM_198530.2	MXRA7	NP_940932.2	ILMN_1796126	0001820181	A	463	CGGGAAGCTGAGGGGAAACCAGTACAAGAAGATGATGACCAAAGAGGAGC	17	-	74681169-74681218	17q25.1d-q25.2a	Homo sapiens matrix-remodelling associated 7 (MXRA7), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ46603; TMAP1; PS1TP1; FLJ41492	FLJ46603; TMAP1; PS1TP1; FLJ41492
Homo sapiens	RefSeq	XM_001723589.1	ILMN_335238	LOC283788	XM_001723589.1	XM_001723589.1		283788	169217850	XM_001723589.1	LOC283788	XP_001723641.1	ILMN_3250374	0002230669	I	1628	GACCCTTGAAACAGAGGGCTCTGCATCCATGTCCATGAGCCTTCATGCCC					PREDICTED: Homo sapiens hypothetical protein LOC283788, transcript variant 2 (LOC283788), mRNA.					
Homo sapiens	RefSeq	XM_001714398.1	ILMN_337944	RCADH5	XM_001714398.1	XM_001714398.1		642443	169169428	XM_001714398.1	RCADH5	XP_001714450.1	ILMN_3299129	0007000639	M	1688	CGTGCCTGTACCCCAAATTCCTAGTATGGCATCTGCCCCTCAGGGGACAC	6	-	66602979-66603028	6q12d	PREDICTED: Homo sapiens similar to Alcohol dehydrogenase class III chi chain (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (RCADH5), mRNA.					
Homo sapiens	RefSeq	NM_001005496.1	ILMN_12779	OR5D16	NM_001005496.1	NM_001005496.1		390144	53828709	NM_001005496.1	OR5D16	NP_001005496.1	ILMN_1809457	0005390524	S	449	TGTATGCATGGGGAGTCGCATGTTCCCTGACACTCGCGTGCTCTGCTTTA	11	+	55363252-55363301	11q11c	Homo sapiens olfactory receptor, family 5, subfamily D, member 16 (OR5D16), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-154	OR11-154
Homo sapiens	RefSeq	NM_001037333.1	ILMN_15267	CYFIP2	NM_001037333.1	NM_001037333.1		26999	82617633	NM_001037333.1	CYFIP2	NP_001032410.1	ILMN_2264981	0003190438	I	35	AGCGGGGCAGAGCATCCTGCGCCCCGGCGCGGGGCCCTGCGGTAGCCTCA	5	+	156625703-156625752	5q33.3a-q33.3b	Homo sapiens cytoplasmic FMR1 interacting protein 2 (CYFIP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11438699] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [pmid 11438699] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 10449408] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10449408] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 15048733] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15048733] [evidence IPI]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	PIR121	PIR121
Homo sapiens	RefSeq	NM_001037333.1	ILMN_15267	CYFIP2	NM_001037333.1	NM_001037333.1		26999	82617633	NM_001037333.1	CYFIP2	NP_001032410.1	ILMN_2354478	0003520020	A	6033	CCTTCAGGAGACTTGATCCCAGTAGACTGAGGTCTTCCCTTTCAGCAGAA	5	+	156752600-156752649	5q33.3a-q33.3b	Homo sapiens cytoplasmic FMR1 interacting protein 2 (CYFIP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11438699] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [pmid 11438699] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 10449408] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10449408] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 15048733] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15048733] [evidence IPI]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	PIR121	PIR121
Homo sapiens	RefSeq	NM_175847.1	ILMN_20993	PTBP1	NM_002819.3	NM_002819.3		5725	28558994	NM_002819.3	PTBP1	NP_002810.1	ILMN_1655154	0004260754	A	3150	GAAACTCCTCCCTTGTCTAGCCCTGTGTTCGCTGTGGACGCTGTAGAGGC	19	+	763215-763264	19p13.3i	Homo sapiens polypyrimidine tract binding protein 1 (PTBP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1641332] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 1641332] [evidence TAS]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 1641332] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 1906036] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10653975] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16373488] [evidence IPI]; Interacting selectively with any stretch of pyrimidines (cytosine or uracil) in an RNA molecule [goid 8187] [pmid 1906036] [evidence TAS]	HNRNPI; PTB-T; PTB3; PTB-1; MGC8461; HNRPI; HNRNP-I; PTB2; MGC10830; PTB; PTB4; pPTB	HNRNPI; PTB-T; PTB3; PTB-1; MGC8461; HNRPI; HNRNP-I; PTB2; MGC10830; PTB; PTB4; pPTB
Homo sapiens	RefSeq	NM_001003938.3	ILMN_2819	HBM	NM_001003938.3	NM_001003938.3		3042	94538363	NM_001003938.3	HBM	NP_001003938.1	ILMN_2091454	0004480730	S	290	TCGTGCTGCGCGTGGACCCAGCCAACTTTCCGCTGCTAATCCAGTGTTTC	16	+	156440-156471:156579-156596	16p13.3f	Homo sapiens hemoglobin, mu (HBM), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]	Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HBAP2	HBAP2
Homo sapiens	RefSeq	NM_198159.1	ILMN_564	MITF	NM_198159.1	NM_198159.1		4286	38156698	NM_198159.1	MITF	NP_937802.1	ILMN_1761324	0002100026	I	75	TGTTCTCACTTTCCAGCAGTGGAAGGACGGGAAGCGGGAGCCATGCAGTC	3	+	69788707-69788748:69788749-69788756	3p14.1a	Homo sapiens microphthalmia-associated transcription factor (MITF), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9647758] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10578055] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9647758] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10578055] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [pmid 9647758] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9647758] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10578055] [evidence NAS]	WS2A	WS2A
Homo sapiens	RefSeq	XM_001716790.1	ILMN_337525	LOC100132820	XM_001716790.1	XM_001716790.1		100132820	169211172	XM_001716790.1	LOC100132820	XP_001716842.1	ILMN_3237873	0000070332	S	166	GGTTTTACCTTTCCACGCCCCTTCTCTGCGAAATGAAGCCACACCACCAC	17	+	21828909-21828944:21828945-21828958	17p11.2a	PREDICTED: Homo sapiens similar to hCG1656091 (LOC100132820), mRNA.					
Homo sapiens	RefSeq	XM_929633.1	ILMN_35085	LOC646686	XM_929633.1	XM_929633.1		646686	88992659	XM_929633.1	LOC646686	XP_934726.1	ILMN_1670757	0002100066	S	148	ATGTGGAGCACTTCAGCCTCCAGAGCCTGTCCTCACAGTGGAGGGGTGTA	6	-	32734540-32734589		PREDICTED: Homo sapiens hypothetical protein LOC646686 (LOC646686), mRNA.					
Homo sapiens	Unigene	Hs.164401	ILMN_79980	HS.164401	Hs.164401		Hs.164401		23285024	BU618809			ILMN_1859662	0005260647	S	489	ACGAGTTTGGGAGAACACTGGTGCTTGAGGGCGGCCAGCTACCTCTTCTG	2	+	172678754-172678803		UI-H-FH1-bfl-e-07-0-UI.s1 NCI_CGAP_FH1 Homo sapiens cDNA clone UI-H-FH1-bfl-e-07-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XR_001432.1	ILMN_35071	LOC158730	XR_001432.1	XR_001432.1		158730	89060596	XR_001432.1	LOC158730		ILMN_1672339	0005310594	I	1527	TAGCAAGAAAAGGTTTTACTACATGGTGACAGATAAAGAATAACAATTTT				Xp21.1b	PREDICTED: Homo sapiens hypothetical LOC158730, transcript variant 3 (LOC158730), misc RNA.					
Homo sapiens	RefSeq	XM_211408.5	ILMN_39215	LOC284260	XM_211408.5	XM_211408.5		284260	89047137	XM_211408.5	LOC284260	XP_211408.2	ILMN_1686628	0004010468	A	94	CTAATATGCGGTGTGAATTAAAGAAGCGGCCTTGCTATGCTGACCTTTTC	18	+	38046352-38046401	18q12.3c	PREDICTED: Homo sapiens hypothetical gene supported by BC011527; BC021928; BC011527; BC021928, transcript variant 1 (LOC284260), mRNA.					
Homo sapiens	Unigene	Hs.564718	ILMN_117333	HS.564718	Hs.564718		Hs.564718		5546204	AI872155			ILMN_1875269	0005360452	S	348	AATGCAAATCAAAACCACAAGGAAGTAGCATTTCATACTCACTAAAGGGT					tz62a11.x1 NCI_CGAP_Ov35 Homo sapiens cDNA clone IMAGE:2293148 3 similar to contains L1.t3 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_014296.2	ILMN_180570	CAPN7	NM_014296.2	NM_014296.2		23473	41327720	NM_014296.2	CAPN7	NP_055111.1	ILMN_2117642	0000580138	S	4247	ACTTGGACCTTGAAGGTAAAGCTTCAAAAGACAGGTTACTGACCATTGAG	3	+	15268311-15268360	3p24.3e	Homo sapiens calpain 7 (CAPN7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	CALPAIN7; PALBH; FLJ36423	CALPAIN7; PALBH; FLJ36423
Homo sapiens	RefSeq	NM_018718.1	ILMN_11000	TSGA14	NM_018718.1	NM_018718.1		95681	16306478	NM_018718.1	TSGA14	NP_061188.1	ILMN_2223805	0006280609	S	3126	CTTCCCTCCTTGTTCCGATTCTGCGTTCCCATCGTCAGACAACTTTGGAG	7	-	130036725-130036774	7q32.2b	Homo sapiens testis specific, 14 (TSGA14), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]			Cep41; DKFZp762H1311	DKFZp762H1311; Cep41
Homo sapiens	RefSeq	NM_018718.1	ILMN_11000	TSGA14	NM_018718.1	NM_018718.1		95681	16306478	NM_018718.1	TSGA14	NP_061188.1	ILMN_1797209	0002600647	S	2954	CCACACTCAGCTTTCCCCTAGCATGGACAAGATTTTCAGCCATTTTTGCC	7	-	130036897-130036946	7q32.2b	Homo sapiens testis specific, 14 (TSGA14), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]			Cep41; DKFZp762H1311	DKFZp762H1311; Cep41
Homo sapiens	RefSeq	XM_938283.1	ILMN_34545	C17ORF68	XM_938283.2	XM_938283.2		80169	113427258	XM_938283.2	C17orf68	XP_943376.2	ILMN_1755711	0005310181	A	3513	ACAAGGCACCTGCATTCACAGGCGGCCCTGAGCACCTGGGTTCTGACTTT				17p13.1c	PREDICTED: Homo sapiens chromosome 17 open reading frame 68 (C17orf68), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_025099.2	ILMN_34545	C17ORF68	XM_938283.2	XM_938283.2		80169	113427258	XM_938283.2	C17orf68	XP_943376.2	ILMN_1702676	0006370288	A	3496	TATGTCCTCTGATTGGGACAAGGCACCTGCATTCACAGGCGGCCCTGAGC				17p13.1c	PREDICTED: Homo sapiens chromosome 17 open reading frame 68 (C17orf68), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				MGC133331; FLJ22170
Homo sapiens	RefSeq	NM_006442.2	ILMN_9412	DRAP1	NM_006442.2	NM_006442.2		10589	18426972	NM_006442.2	DRAP1	NP_006433.2	ILMN_2112301	0003990598	S	839	GGACGAAGAAGATTACGACTCCTAGCGCCTTCTGCCCCCCAGACCATAGC	11	+	65445458-65445482:65445483-65445507	11q13.1d	Homo sapiens DR1-associated protein 1 (negative cofactor 2 alpha) (DRAP1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8608938] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8608938] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8608938] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	NC2-alpha	NC2-alpha
Homo sapiens	RefSeq	XR_037323.1	ILMN_352044	RPL31P10	XR_037323.1	XR_037323.1		390283	169204530	XR_037323.1	RPL31P10		ILMN_3306270	0007000373	M	460	ATGTATTTGCTACCACTTTCAAAAATCTACAGACAGTCAATGTGGATGAG				12p13.31d	PREDICTED: Homo sapiens misc_RNA (RPL31P10), miscRNA.					
Homo sapiens	RefSeq	XM_927719.1	ILMN_34122	LOC644607	XM_927719.1	XM_927719.1		644607	89035722	XM_927719.1	LOC644607	XP_932812.1	ILMN_1657157	0001470041	S	3	GGCAGCAGACCTGGGGGCCACACCCTGCAAAGCCACAGGGGAAGACATGC	12	-	105458712-105458761		PREDICTED: Homo sapiens hypothetical protein LOC644607 (LOC644607), mRNA.					
Homo sapiens	RefSeq	NM_002283.2	ILMN_161992	KRT85	NM_002283.3	NM_002283.3		3891	110611241	NM_002283.3	KRT85	NP_002274.1	ILMN_1765072	0003370328	S	2143	TCTCTCTCAGACTGCCTTCCTGCTTCTGGGCTAACCTGTTCCAGCCAGGC	12	-	52754088-52754137	12q13.13d	Homo sapiens keratin 85 (KRT85), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 9084137] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9084137] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	hHb5; KRTHB5; Hb-5; HB5	hHb5; Hb-5; HB5
Homo sapiens	RefSeq	NM_007289.1	ILMN_10667	MME	NM_007289.1	NM_007289.1		4311	6042203	NM_007289.1	MME	NP_009220.1	ILMN_1751943	0002970170	I	59	TCCCTGCGGCCTCTGCCTTGGGGAGTTATGTTTTGTTACCGAGATCCGCG	3	+	156280807-156280856	3q25.2c-q25.31a	Homo sapiens membrane metallo-endopeptidase (neutral endopeptidase, enkephalinase, CALLA, CD10) (MME), transcript variant 2b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1660144] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2521388] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1660144] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2521388] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17342744] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17342744] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NEP; MGC126681; CD10; MGC126707; CALLA	NEP; MGC126681; CD10; MGC126707; CALLA
Homo sapiens	RefSeq	NM_001056.3	ILMN_24473	SULT1C2	NM_001056.3	NM_001056.3		6819	45935387	NM_001056.3	SULT1C2	NP_001047.1	ILMN_1766079	0001470689	I	742	GCCAAAGCAATGCCCTCTCCACGGATACTAAAGACTCACCTTTCCACTCA	2	+	108283737-108283786	2q12.3c	Homo sapiens sulfotransferase family, cytosolic, 1C, member 2 (SULT1C2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9169148] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [pmid 9169148] [evidence TAS]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [pmid 9852044] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [pmid 9169148] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	humSULTC2; ST1C1; ST1C2; SULT1C#1; SULT1C1	humSULTC2; ST1C1; ST1C2; SULT1C#1; SULT1C1
Homo sapiens	RefSeq	NM_001056.3	ILMN_24473	SULT1C2	NM_001056.3	NM_001056.3		6819	45935387	NM_001056.3	SULT1C2	NP_001047.1	ILMN_2415329	0006900075	A	2273	GCAGTGCCTGGCACACAGCAAGTGCCCTTGAGAACTTGTAGAGGGAGTAA	2	+	108292281-108292330	2q12.3c	Homo sapiens sulfotransferase family, cytosolic, 1C, member 2 (SULT1C2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9169148] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [pmid 9169148] [evidence TAS]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [pmid 9852044] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [pmid 9169148] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	humSULTC2; ST1C1; ST1C2; SULT1C#1; SULT1C1	humSULTC2; ST1C1; ST1C2; SULT1C#1; SULT1C1
Homo sapiens	RefSeq	NM_013370.3	ILMN_17240	OSGIN1	NM_013370.3	NM_013370.3		29948	118572589	NM_013370.3	OSGIN1	NP_037502.3	ILMN_2255877	0004860669	I	517	CAGATGCTCCGGTACCCTGGGCTGTGGCTTCCAGGATGTGCCTGACTCCA	16	+	82542310-82542359	16q23.3b	Homo sapiens oxidative stress induced growth inhibitor 1 (OSGIN1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11459809] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 11459809] [evidence IDA]	OKL38; BDGI	BDGI
Homo sapiens	RefSeq	NM_006605.1	ILMN_26384	RFPL2	NM_006605.1	NM_006605.1		10739	5730010	NM_006605.1	RFPL2	NP_006596.1	ILMN_2159311	0001770670	S	1185	CAGGGTAAGAAAATTACTTGGGTGGGTAGACTTAGGAACGCTCTACTTCG	22	-	30916683-30916732	22q12.3a	Homo sapiens ret finger protein-like 2 (RFPL2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10508838] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF79	RNF79
Homo sapiens	RefSeq	NM_019069.3	ILMN_26641	WDR5B	NM_019069.3	NM_019069.3		54554	42544246	NM_019069.3	WDR5B	NP_061942.2	ILMN_1665622	0002350228	S	3371	CTTCAAACTCAGTTCAGAAATCACTGAAGGAACCATCCACTGCCGGCCTG	3	-	123614152-123614201	3q21.1a	Homo sapiens WD repeat domain 5B (WDR5B), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		MGC49879; FLJ11287	MGC49879; FLJ11287
Homo sapiens	RefSeq	XM_930043.1	ILMN_32638	LOC647046	XM_930043.1	XM_930043.1		647046	88965905	XM_930043.1	LOC647046	XP_935136.1	ILMN_1685696	0007160086	S	781	AGCTGAGTCAAGTGGCATACATAAAAGCAATGAAGGTTTCTTGGACATTC	3	+	158800932-158800981		PREDICTED: Homo sapiens similar to hypothetical protein BC010062 (LOC647046), mRNA.					
Homo sapiens	RefSeq	NM_006506.2	ILMN_15489	RASA2	NM_006506.2	NM_006506.2		5922	12545407	NM_006506.2	RASA2	NP_006497.2	ILMN_1703688	0002190725	S	2177	GCTGTCAGGAGACTGGTGAAAACACTCTCGGCTGCAAGCCATGTACTGCA	3	+	141327491-141327539:141328262-141328262	3q23c	Homo sapiens RAS p21 protein activator 2 (RASA2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Ras superfamily [goid 5099] [pmid 8812506] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	GAP1M	GAP1M
Homo sapiens	RefSeq	NR_029692.1	ILMN_387870	MIR9-3	NR_029692.1	NR_029692.1		407051	262205356	NR_029692.1	MIR9-3		ILMN_3308420	0004670674	S	5	CCCGTTTCTCTCTTTGGTTATCTAGCTGTATGAGTGCCACAGAGCCGTCA				15q26.1a	Homo sapiens microRNA 9-3 (MIR9-3), microRNA.					
Homo sapiens	RefSeq	XM_930578.1	ILMN_42929	LOC647135	XM_930578.1	XM_930578.1		647135	88943049	XM_930578.1	LOC647135	XP_935671.1	ILMN_1684634	0004850228	I	1431	GGTACAGAGATATTTCTTCACAGAGGTTCTTGGGTGGAGCAATGACACAA	1	+	142765025-142765074	1q21.1a	PREDICTED: Homo sapiens similar to SLIT-ROBO Rho GTPase-activating protein 2 (srGAP2) (Formin-binding protein 2), transcript variant 1 (LOC647135), mRNA.					
Homo sapiens	RefSeq	XM_943073.1	ILMN_45721	LOC647869	XM_943073.2	XM_943073.2		647869	113425515	XM_943073.2	LOC647869	XP_948166.1	ILMN_1662773	0000430010	S	214	AGACTTGCGTTGGGCCCACTGGCTCTGGGCTCAGCCCCTGGTGAGCTGAA					PREDICTED: Homo sapiens hypothetical LOC647869 (LOC647869), mRNA.					
Homo sapiens	RefSeq	XM_001713801.1	ILMN_349545	LOC100133777	XM_001713801.1	XM_001713801.1		100133777	169207644	XM_001713801.1	LOC100133777	XP_001713853.1	ILMN_3247129	0003460612	S	5	TCAGTGATGACTACTGTTGGTGTATGAGTCATATACGATGAATACATGTC					PREDICTED: Homo sapiens hypothetical protein LOC100133777 (LOC100133777), mRNA.					
Homo sapiens	RefSeq	NM_178857.4	ILMN_5781	RP1L1	NM_178857.4	NM_178857.4		94137	40255277	NM_178857.4	RP1L1	NP_849188.3	ILMN_1742054	0002070356	S	8051	CCCTGTTGATCTCCTGTTACTTTTCTCCTTGGCTTCTGTTGGCACTCACC				8p23.1c-p23.1b	Homo sapiens retinitis pigmentosa 1-like 1 (RP1L1), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Homo sapiens	RefSeq	NM_001017928.2	ILMN_27140	CCDC58	NM_001017928.2	NM_001017928.2		131076	65301162	NM_001017928.2	CCDC58	NP_001017928.1	ILMN_1686920	0003610300	S	373	GACAGGAGCTGGAAGGTGTTTAATGAACGCTGCCGAATTCACTTCAAGCC	3	-	123561421-123561456:123564505-123564518	3q21.1a	Homo sapiens coiled-coil domain containing 58 (CCDC58), mRNA.				FLJ33273	FLJ33273
Homo sapiens	RefSeq	XM_927472.1	ILMN_42349	LOC644298	XM_927472.1	XM_927472.1		644298	89057829	XM_927472.1	LOC644298	XP_932565.1	ILMN_1665585	0000060315	S	1523	GAGACAAAGGGACACCTCGAAGGTGTCAGAGAGACGGTTGTTTTGGACAG	20	-	19685890-19685939		PREDICTED: Homo sapiens hypothetical protein LOC644298 (LOC644298), mRNA.					
Homo sapiens	Unigene	Hs.542571	ILMN_106376	HS.542571	Hs.542571		Hs.542571		13748071	BG222050			ILMN_1875967	0007610577	S	230	CAACCCAGTCTAACCAAAGGGGTGGTTGGTGGAAGGTGAAGGAGTCACAC	21	-	35644011-35644060		RST41868 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_015831.1	ILMN_137409	ACHE	NM_015831.1	NM_015831.1		43	7710111	NM_015831.1	ACHE	NP_056646.1	ILMN_1780485	0001710500	I	2491	TTCAACCCGCCCAAATGTCCGATCCCCGACCTTCCTCGTGCCGTCCTCCC	7	-	100325922-100325971	7q22.1c	Homo sapiens acetylcholinesterase (YT blood group) (ACHE), transcript variant E4-E5, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11283752] [evidence TAS]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [pmid 16289501] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15454088] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [pmid 8460160] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 14766237] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of acetylcholine that occurs in the synaptic cleft during synaptic transmission [goid 1507] [pmid 1517212] [evidence NAS]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [pmid 15454088] [evidence IEP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 11283752] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 11283752] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 11283752] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 11283752] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11283752] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 11283752] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 32223] [pmid 1517212] [evidence IC ]; The chemical reactions and pathways involving amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42982] [pmid 12769797] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [pmid 11283752] [evidence TAS]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 11283752] [evidence TAS]; Catalysis of the reaction: acetylcholine + H2O = choline + acetate [goid 3990] [pmid 1517212] [evidence IMP]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [pmid 1517212] [evidence IDA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 12524166] [evidence IDA]; Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 17171] [pmid 3954986] [evidence IDA]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [pmid 1517212] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 1517212] [evidence NAS]; Interacting selectively with laminin-1, a glycoprotein trimer with the subunit composition alpha1, beta1, gamma1 [goid 43237] [pmid 12524166] [evidence IDA]	YT	YT
Homo sapiens	RefSeq	NM_015831.1	ILMN_137409	ACHE	NM_015831.1	NM_015831.1		43	7710111	NM_015831.1	ACHE	NP_056646.1	ILMN_1735471	0002190168	A	2854	CTGAGCTCCTCCCCGCGTGCCTTCGCCCTCTGGCTGCAAATAAACTGTTA	7	-	100325559-100325608	7q22.1c	Homo sapiens acetylcholinesterase (YT blood group) (ACHE), transcript variant E4-E5, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11283752] [evidence TAS]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [pmid 16289501] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15454088] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [pmid 8460160] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 14766237] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of acetylcholine that occurs in the synaptic cleft during synaptic transmission [goid 1507] [pmid 1517212] [evidence NAS]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [pmid 15454088] [evidence IEP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 11283752] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 11283752] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 11283752] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 11283752] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11283752] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 11283752] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 32223] [pmid 1517212] [evidence IC ]; The chemical reactions and pathways involving amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42982] [pmid 12769797] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [pmid 11283752] [evidence TAS]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 11283752] [evidence TAS]; Catalysis of the reaction: acetylcholine + H2O = choline + acetate [goid 3990] [pmid 1517212] [evidence IMP]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [pmid 1517212] [evidence IDA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 12524166] [evidence IDA]; Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 17171] [pmid 3954986] [evidence IDA]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [pmid 1517212] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 1517212] [evidence NAS]; Interacting selectively with laminin-1, a glycoprotein trimer with the subunit composition alpha1, beta1, gamma1 [goid 43237] [pmid 12524166] [evidence IDA]	YT	YT
Homo sapiens	RefSeq	NM_177402.3	ILMN_22072	SYT2	NM_177402.3	NM_177402.3		127833	31560862	NM_177402.3	SYT2	NP_796376.2	ILMN_1770857	0000830367	S	1992	GCCATGGACAGTAAAGTTGTGTGGGAAAAGAAGGCTCTTTGGGGACCCTG	1	-	200831903-200831952	1q32.1d	Homo sapiens synaptotagmin II (SYT2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding an endocytic vesicle [goid 30666] [pmid 2446925] [evidence EXP]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized [goid 42598] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	SytII	SytII
Homo sapiens	RefSeq	NM_017716.1	ILMN_25117	MS4A12	NM_017716.1	NM_017716.1		54860	8923205	NM_017716.1	MS4A12	NP_060186.1	ILMN_1731529	0004730240	S	684	CTCCCTCTTGGAGTTCTTCGTAGCTTGTGCCACAGCCCATTTTGCCAACC	11	+	60030815-60030864	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 12 (MS4A12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Ms4a10	Ms4a10
Homo sapiens	RefSeq	NM_058230.1	ILMN_20383	ZNF354B	NM_058230.1	NM_058230.1		117608	17530790	NM_058230.1	ZNF354B	NP_478137.1	ILMN_1770266	0006860239	S	1974	ATTCACATTGAAGAGGACTCCTTAAAAGCCGATTTGCATGTGTGAAAGCC	5	+	178243854-178243898:178243899-178243903	5q35.3c	Homo sapiens zinc finger protein 354B (ZNF354B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC138316; FLJ25008; KID2	MGC138316; FLJ25008; KID2
Homo sapiens	RefSeq	XM_928302.1	ILMN_40587	LOC643817	XM_928302.1	XM_928302.1		643817	89059936	XM_928302.1	LOC643817	XP_933395.1	ILMN_1689798	0006520653	S	283	TACCAAGGTCTTAGCAACCGGCAGACAAGGTGATTCTCTCCCGTGCCTGG	X	+	109359700-109359749		PREDICTED: Homo sapiens hypothetical protein LOC643817 (LOC643817), mRNA.					
Homo sapiens	RefSeq	NM_173580.1	ILMN_3253	C11ORF44	NM_173580.1	NM_173580.1		283171	27734816	NM_173580.1	C11orf44	NP_775851.1	ILMN_1803015	0004250386	S	3312	TCTGCTGGACTGATGTCTTCTGCAGGTTGCAGATCCTGACCATGGGCTGC	11	+	130092222-130092271	11q24.3c	Homo sapiens chromosome 11 open reading frame 44 (C11orf44), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ39058	FLJ39058
Homo sapiens	RefSeq	NM_203430.1	ILMN_25214	PPIA	NM_021130.3	NM_021130.3		5478	114520617	NM_021130.3	PPIA	NP_066953.1	ILMN_1704529	0001850035	A	1215	CAGAGGCAGGAAAAGCAAGGAGCCAGAATTAAGAGGTTGGGTCAGTCTGC	7	+	44808180-44808229	7p13c	Homo sapiens peptidylprolyl isomerase A (cyclophilin A) (PPIA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11943775] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1560526] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15098018] [evidence EXP]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 2644542] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 2179953] [evidence TAS]; The molecular events that lead to the integration of a viral genome into the host genome [goid 19047] [pmid 16291214] [evidence EXP]; The set of processes involved in the start of virus infection of cells [goid 19059] [pmid 12091904] [evidence EXP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that modulates the frequency, rate or extent of viral genome replication [goid 45069] [pmid 7590732] [evidence TAS]; Any process that modulates the frequency, rate or extent of viral genome replication [goid 45069] [pmid 11250896] [evidence IMP]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]; Interacting selectively with a virion, either by binding to components of the capsid or the viral envelope [goid 46790] [pmid 11250896] [evidence NAS]; Interacting selectively with an unfolded protein [goid 51082] [pmid 2644542] [evidence TAS]	CYPH; MGC12404; MGC23397; CYPA; MGC117158	CYPH; MGC12404; MGC23397; CYPA; MGC117158
Homo sapiens	RefSeq	NR_022009.1	ILMN_356873	PAR1	NR_022009.1	NR_022009.1		145624	183238675	NR_022009.1	PAR1		ILMN_3245815	0000990215	S	2128	CCTAGTGGCAGAGCTGCTTAGTTCTACAGCCTCTGAGTGGAATCCTCACG	15	+	25382916-25382965	15q11.2e	Homo sapiens Prader-Willi/Angelman region-1 (PAR1), non-coding RNA.					
Homo sapiens	RefSeq	NM_138481.1	ILMN_364294	CHADL	NM_138481.1	NM_138481.1		150356	194440718	NM_138481.1	CHADL	NP_612490.1	ILMN_3238072	0002030202	S	2259	AGGCCCAGTGCCAGGAGAACCCCCATCAAAGGAAGACAGTGTGGAGCAGA	22	-	41631152-41631201		Homo sapiens chondroadherin-like (CHADL), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XR_015575.1	ILMN_183010	LOC729524	XR_015575.1	XR_015575.1		729524	113424100	XR_015575.1	LOC729524		ILMN_3302701	0001230136	M	1029	CACCAGCCGGGAAGCTGCTGTGGAAGCCTTGGAATTGCTGGGATCTACGT	13	+	18138234-18138283	13q11c	PREDICTED: Homo sapiens misc_RNA (LOC729524), miscRNA.					
Homo sapiens	RefSeq	XR_015575.1	ILMN_183010	LOC729524	XR_015575.1	XR_015575.1		729524	113424100	XR_015575.1	LOC729524		ILMN_3226095	0002350187	A	1135	GAGCTGCGTCACCAGAGGGTTGAGTACCTGCCCAAACTGGAGCCCCCACA	13	+	18138340-18138389	13q11c	PREDICTED: Homo sapiens misc_RNA (LOC729524), miscRNA.					
Homo sapiens	RefSeq	NM_032140.1	ILMN_2389	C16ORF48	NM_032140.1	NM_032140.1		84080	14149804	NM_032140.1	C16orf48	NP_115516.1	ILMN_1787324	0002760706	S	1466	AGTCACCAGTGGCTGCAGAAGGGCCACCCTAGCCTTTTAACTGCTTTGTC	16	-	67696872-67696921	16q22.1b	Homo sapiens chromosome 16 open reading frame 48 (C16orf48), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [pmid 11256614] [evidence IDA]			DAKV6410; DKFZP434A1319	DAKV6410; DKFZP434A1319
Homo sapiens	RefSeq	NM_001001689.1	ILMN_6452	FLJ44005	NM_001001689.1	NM_001001689.1		400797	48717383	NM_001001689.1	FLJ44005	NP_001001689.1	ILMN_1763975	0001770706	S	2809	GCCACATCACTTTCTCTCTGTGGCCTCTATTTCTATCTCCTCTGCACCCC	1	-	176729725-176729774	1q25.2b	Homo sapiens FLJ44005 protein (FLJ44005), mRNA.					
Homo sapiens	RefSeq	NM_144698.2	ILMN_8019	ANKRD35	NM_144698.2	NM_144698.2		148741	24432064	NM_144698.2	ANKRD35	NP_653299.2	ILMN_1798006	0004590377	S	3230	AGACCTGAGAACCTGGACCCTGGAATCAGCATGGATGAGACCAGAGGAGG	1	+	144279785-144279834	1q21.1b	Homo sapiens ankyrin repeat domain 35 (ANKRD35), mRNA.				MGC126667; FLJ25124; MGC126669	MGC126667; FLJ25124; MGC126669
Homo sapiens	RefSeq	NM_000914.2	ILMN_5783	OPRM1	NM_000914.2	NM_000914.2		4988	56549096	NM_000914.2	OPRM1	NP_000905.3	ILMN_2373155	0007050634	A	1275	ACGATGCTTCAGAGAGTTCTGTATCCCAACCTCTTCCAACATTGAGCAAC	6	+	154454174-154454223	6q25.2b-q25.2c	Homo sapiens opioid receptor, mu 1 (OPRM1), transcript variant MOR-1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9242668] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9242668] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9242668] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7905839] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 7905839] [evidence TAS]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [pmid 9689128] [evidence TAS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 2159143] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4988] [pmid 9689128] [evidence TAS]	MOR1; OPRM; KIAA0403	MOR1; OPRM; KIAA0403
Homo sapiens	RefSeq	NM_000914.2	ILMN_5783	OPRM1	NM_000914.2	NM_000914.2		4988	56549096	NM_000914.2	OPRM1	NP_000905.3	ILMN_2275199	0003120719	I	1649	ACCACACCGAGGAGTCCAGTTTGTGCAAGACACCCAGTGGAACCAAAACC	6	+	154481757-154481806	6q25.2b-q25.2c	Homo sapiens opioid receptor, mu 1 (OPRM1), transcript variant MOR-1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9242668] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9242668] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9242668] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7905839] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 7905839] [evidence TAS]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [pmid 9689128] [evidence TAS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 2159143] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4988] [pmid 9689128] [evidence TAS]	MOR1; OPRM; KIAA0403	MOR1; OPRM; KIAA0403
Homo sapiens	RefSeq	NM_177983.1	ILMN_878	PPM1G	NM_177983.1	NM_177983.1		5496	29826281	NM_177983.1	PPM1G	NP_817092.1	ILMN_1765522	0000940202	I	54	TTACCGCCTCCTGGCCGGCCTCGCGCCTTTCACCGGCACCTTGCGTCGGT	2	-	27632393-27632442	2p23.3a	Homo sapiens protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform (PPM1G), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9271424] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9276438] [evidence TAS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9271424] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 9276438] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	MGC2870; PP2CG; PP2CGAMMA; PPP2CG; MGC1675	MGC2870; PP2CG; PP2CGAMMA; PPP2CG; MGC1675
Homo sapiens	RefSeq	NM_138330.1	ILMN_5421	ZNF675	NM_138330.1	NM_138330.1		171392	21264321	NM_138330.1	ZNF675	NP_612203.1	ILMN_1741640	0005550240	S	1220	GGAATGCGGCAAAGCTTTTAACCGATCCTCAAATCTTACGGAACATAGGA	19	-	23628412-23628461	19p12b	Homo sapiens zinc finger protein 675 (ZNF675), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11751921] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11751921] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [pmid 11751921] [evidence NAS]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 11751921] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 11751921] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 11751921] [evidence NAS]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [pmid 11751921] [evidence TAS]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [pmid 11751921] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [pmid 11851921] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11751921] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46329] [pmid 11751921] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11751921] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11751921] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11751921] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 11751921] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ36350; TBZF; TIZ	FLJ36350; TBZF; TIZ
Homo sapiens	Unigene	Hs.574278	ILMN_126459	HS.574278	Hs.574278		Hs.574278		80567776	DA608330			ILMN_1835789	0002750754	S	490	GGAAGTCAGCAACTCCATCCACTCATTGCACAGAGACCAGAAAGGGGAAG	15	+	76488324-76488373		DA608330 IMR322 Homo sapiens cDNA clone IMR322005706 5, mRNA sequence					
Homo sapiens	RefSeq	XM_930699.1	ILMN_167507	LOC642255	XM_001127807.1	XM_001127807.1		642255	113420565	XM_001127807.1	LOC642255	XP_001127807.1	ILMN_1679867	0004730040	A	1110	GAATGAGCTCAGTGACCACTTGGATGCTATGGACTCCAACCTGGATAACC					PREDICTED: Homo sapiens similar to Diacylglycerol O-acyltransferase 1 (Diglyceride acyltransferase) (ACAT-related gene product 1) (LOC642255), mRNA.					
Homo sapiens	RefSeq	XM_937718.1	ILMN_167507	LOC642255	XM_001127807.1	XM_001127807.1		642255	113420565	XM_001127807.1	LOC642255	XP_001127807.1	ILMN_1665621	0001410167	A	84	GAGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGG					PREDICTED: Homo sapiens similar to Diacylglycerol O-acyltransferase 1 (Diglyceride acyltransferase) (ACAT-related gene product 1) (LOC642255), mRNA.					
Homo sapiens	RefSeq	XM_926368.1	ILMN_167507	LOC642255	XM_001127807.1	XM_001127807.1		642255	113420565	XM_001127807.1	LOC642255	XP_001127807.1	ILMN_1679371	0002370037	S	232	CTGGTCAAGCCAGAGAGAGACGACACGGAGTTCCAGCACCCATGCTTCCT					PREDICTED: Homo sapiens similar to Diacylglycerol O-acyltransferase 1 (Diglyceride acyltransferase) (ACAT-related gene product 1) (LOC642255), mRNA.					
Homo sapiens	RefSeq	XM_001714650.1	ILMN_349661	LOC728510	XM_001714650.1	XM_001714650.1		728510	169162523	XM_001714650.1	LOC728510	XP_001714702.1	ILMN_3305111	0005900288	M	378	GGGTCCTTAGTGGCATGACTGAGTCGCTGGACCACTGTTGGAACCACCCT				1q41c	PREDICTED: Homo sapiens hypothetical LOC728510 (LOC728510), mRNA.					
Homo sapiens	RefSeq	XR_037744.1	ILMN_341169	LOC100129795	XR_037744.1	XR_037744.1		100129795	169203554	XR_037744.1	LOC100129795		ILMN_3183755	0005870601	A	265	GTACAGCCAACAGTTACCCTGTGGGGCTTTGAAATAACACCACCTTACGG				11q13.4c	PREDICTED: Homo sapiens misc_RNA (LOC100129795), miscRNA.					
Homo sapiens	RefSeq	NM_020971.1	ILMN_15909	SPTBN4	NM_020971.1	NM_020971.1		57731	40353203	NM_020971.1	SPTBN4	NP_066022.1	ILMN_1658864	0003840301	I	11	TGTGACTCAGTGACCCGGAGGGCAAGCAGGACTGTGGGTGACACCTTGTG	19	+	45663998-45664047	19q13.2b	Homo sapiens spectrin, beta, non-erythrocytic 4 (SPTBN4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11294830] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [pmid 11086001] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11294830] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 11294830] [evidence IDA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 11086001] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 11294830] [evidence TAS]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11086001] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 11294830] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with ankyrin, a 200 kDa cytoskeletal protein that attaches other cytoskeletal proteins to integral membrane proteins [goid 30506] [pmid 11294830] [evidence IDA]	KIAA1642; QV; SPTBN3	KIAA1642; QV; SPTBN3
Homo sapiens	RefSeq	XM_001724450.1	ILMN_344146	LOC100133564	XM_001724450.1	XM_001724450.1		100133564	169218191	XM_001724450.1	LOC100133564	XP_001724502.1	ILMN_3242912	0001030369	S	232	CCAATGGCACAATCTTGGCTCACTGCAACCTCTGCCTGCTGGGTTCAAGC					PREDICTED: Homo sapiens similar to C21orf81 protein (LOC100133564), mRNA.					
Homo sapiens	RefSeq	NM_002714.2	ILMN_8464	PPP1R10	NM_002714.2	NM_002714.2		5514	25777670	NM_002714.2	PPP1R10	NP_002705.2	ILMN_1659058	0006480474	S	4171	GCTGGGCCTGAAAGTCACACTACATGCACTGCCTTTGGGAGTCAGCTCAC	6	-	30676459-30676508	6p21.33b	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 10 (PPP1R10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9461602] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [pmid 9461602] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CAT53; FB19; PNUTS	CAT53; FB19; PNUTS
Homo sapiens	RefSeq	NM_172234.1	ILMN_6687	IL17RB	NM_172234.1	NM_172234.1		55540	27477075	NM_172234.1	IL17RB	NP_758434.1	ILMN_1710747	0005560097	I	1716	GGGCGAAGCCAGAAAGAAGGGAAGTTTTGGCTGAAGTAGGAGTCTTGGTG	3	+	53867682-53867731	3p21.1b-p21.1a	Homo sapiens interleukin 17 receptor B (IL17RB), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10749887] [evidence TAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10815801] [evidence NAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 10749887] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [pmid 10815801] [evidence NAS]	IL17BR; IL17RH1; EVI27; MGC5245; CRL4	IL17RH1; IL17BR; EVI27; MGC5245; CRL4
Homo sapiens	RefSeq	XM_001718869.1	ILMN_348639	LOC100129231	XM_001718869.1	XM_001718869.1		100129231	169216864	XM_001718869.1	LOC100129231	XP_001718921.1	ILMN_3268832	0005390242	M	740	CCGAGGATGTTGGAACCATTGCTAGTCTCAATGCTGCTATTGCTTATGGC	X	-	123166478-123166496:123166853-123166883	Xq25c	PREDICTED: Homo sapiens similar to hCG1644369 (LOC100129231), mRNA.					
Homo sapiens	RefSeq	NM_012431.1	ILMN_178526	SEMA3E	NM_012431.1	NM_012431.1		9723	6912649	NM_012431.1	SEMA3E	NP_036563.1	ILMN_2154322	0001580608	S	6155	AGCAGCTGTTGTCCTTAAAAATGAATTGACCTGGCCGGGCGCGGTGGCTC	7	-	82994072-82994121	7q21.11e	Homo sapiens sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E (SEMA3E), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9515811] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SEMAH; coll-5; M-SEMAH; M-sema H; M-SemaK; KIAA0331	SEMAH; coll-5; M-SEMAH; M-sema H; M-SemaK; KIAA0331
Homo sapiens	RefSeq	XR_015713.2	ILMN_170893	LOC729954	XR_015713.2	XR_015713.2		729954	169210663	XR_015713.2	LOC729954		ILMN_3301528	0005900370	M	1402	CTGCTGAGGAGAGGGACCTACTGGATGATGAGGATAATGAAGATTGGGGG				16p13.13c	PREDICTED: Homo sapiens misc_RNA (LOC729954), miscRNA.					
Homo sapiens	RefSeq	XM_001716973.1	ILMN_351695	LOC100133283	XM_001716973.1	XM_001716973.1		100133283	169164480	XM_001716973.1	LOC100133283	XP_001717025.1	ILMN_3218529	0000870746	A	85	CATAAAATATTAAGAAAGGGTTTCTGAAGCATTCACAGGAACAGAAAACT				2q33.2a	PREDICTED: Homo sapiens hypothetical protein LOC100133283 (LOC100133283), mRNA.					
Homo sapiens	Unigene	Hs.561174	ILMN_114701	HS.561174	Hs.561174		Hs.561174		21478997	BQ575680			ILMN_1861652	0003140612	S	239	GGGTTACAACACTTTGAGAGCAGTTTCAGGAAGGCCACACCCAATCCTTC	3	+	21435967-21436016		UI-H-EZ1-bbf-l-14-0-UI.s1 NCI_CGAP_Ch2 Homo sapiens cDNA clone UI-H-EZ1-bbf-l-14-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_932512.1	ILMN_37976	LOC644912	XM_932512.1	XM_932512.1		644912	89025135	XM_932512.1	LOC644912	XP_937605.1	ILMN_1803717	0007510575	S	172	CGCGCGCCCCCCACATCCTCCTCGGGACACTTGTCCCTGGATCCTCTACC	7	-	68700796-68700845		PREDICTED: Homo sapiens hypothetical protein LOC644912 (LOC644912), mRNA.					
Homo sapiens	RefSeq	NM_031409.2	ILMN_176442	CCR6	NM_031409.2	NM_031409.2		1235	37188164	NM_031409.2	CCR6	NP_113597.2	ILMN_2387696	0005220296	A	3163	ATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCGAGATCGTGCCAT	6	+	167472319-167472368	6q27c	Homo sapiens chemokine (C-C motif) receptor 6 (CCR6), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9186513] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9186513] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9186513] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 11001880] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [pmid 11001880] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10521347] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9186513] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9223454] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9186513] [evidence TAS];  [goid 4945] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	CKR-L3; DRY-6; CKR6; BN-1; GPR29; DCR2; GPR-CY4; CD196; STRL22; GPRCY4; CKRL3; CMKBR6	CKR-L3; DRY-6; CKR6; BN-1; GPR29; DCR2; GPR-CY4; CD196; STRL22; GPRCY4; CKRL3; CMKBR6
Homo sapiens	RefSeq	NM_000451.2	ILMN_137497	SHOX	NM_000451.2	NM_000451.2		6473	6031201	NM_000451.2	SHOX	NP_000442.1	ILMN_1695233	0002320020	I	4209	CCCATTGACGACATAGCGGCCCCCGGTCCGGGTTACAAATACATCTACAG	XY	+	526440-526489	Xp22.33f,Yp11.32c	Homo sapiens short stature homeobox (SHOX), transcript variant SHOXa, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9590292] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9259282] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9259282] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	GCFX; SHOXY; SS; PHOG	GCFX; SHOXY; SS; PHOG
Homo sapiens	RefSeq	NM_014592.2	ILMN_12275	KCNIP1	NM_014592.2	NM_014592.2		30820	27886683	NM_014592.2	KCNIP1	NP_055407.1	ILMN_2368856	0004390291	A	1147	GAGGTCTCTCCAGCTGTTTCAAAATGTCATGTAACTGGTGACACTCAGCC	5	+	169931604-169931637:170078340-170078355	5q35.1c	Homo sapiens Kv channel interacting protein 1 (KCNIP1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal [goid 5513] [pmid 10676964] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10676964] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 10676964] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC95; KCHIP1; VABP	MGC95; KCHIP1; VABP
Homo sapiens	RefSeq	XM_930982.1	ILMN_37110	LOC642653	XM_930982.1	XM_930982.1		642653	89058122	XM_930982.1	LOC642653	XP_936075.1	ILMN_1661292	0006290687	S	205	GACCTCCAGTCTCCGGCAACGATGGACCCTCACAGACACGGCAGGGAGCG	21	-	14018267-14018316		PREDICTED: Homo sapiens hypothetical protein LOC642653 (LOC642653), mRNA.					
Homo sapiens	RefSeq	NR_003695.1	ILMN_346353	SNORD12B	NR_003695.1	NR_003695.1		100113393	154800508	NR_003695.1	SNORD12B		ILMN_3240002	0005700634	S	5	CTGCTGGCATATATGATGACTTAGCTTTTTTCCCCGACAGATCGACTATG	20	+	47896854-47896903		Homo sapiens small nucleolar RNA, C/D box 12B (SNORD12B), small nucleolar RNA.					
Homo sapiens	RefSeq	NM_181534.2	ILMN_16977	KRT25	NM_181534.2	NM_181534.2		147183	31581553	NM_181534.2	KRT25	NP_853512.1	ILMN_1704497	0007650110	S	1397	TTGAGATGCAACAGAGAACGTATGCCACATAGCCCCTGCGAAGAAAAGGC	17	-	36158003-36158052	17q21.2a	Homo sapiens keratin 25 (KRT25), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KRT25A	KRT25A
Homo sapiens	RefSeq	NM_021599.1	ILMN_20566	ADAMTS2	NM_021599.1	NM_021599.1		9509	11038658	NM_021599.1	ADAMTS2	NP_067610.1	ILMN_1811765	0007150609	A	1463	TGAACGAGCAATGCCGCTTTGACTTCGGCCTGGGCTACATGATGTGCACG	5	-	178632584-178632633	5q35.3d	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 2 (ADAMTS2), transcript variant 2, mRNA.	A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 10417273] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PCINP; ADAMTS-3; hPCPNI; NPI; ADAM-TS2; PCPNI	PCINP; ADAMTS-3; hPCPNI; NPI; ADAM-TS2; PCPNI
Homo sapiens	Unigene	Hs.426162	ILMN_90717	HS.426162	Hs.426162		Hs.426162		19588933	BM971346			ILMN_1819876	0002190021	S	487	GCTCTTTCCGGCTTGAGTCAGGTGTAGTGATGGCTTGGACCCTTCCTGTG	12	-	4794041-4794090		UI-CF-EC1-abl-i-23-0-UI.s2 UI-CF-EC1 Homo sapiens cDNA clone UI-CF-EC1-abl-i-23-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_138571.3	ILMN_23568	HINT3	NM_138571.3	NM_138571.3		135114	21359981	NM_138571.3	HINT3	NP_612638.2	ILMN_1779076	0000020692	S	607	CCATTTCCCACTTGCACCTTCATGTTCTGGCACCAGTGGATCAGCTTGGC	6	+	126337715-126337764	6q22.32a	Homo sapiens histidine triad nucleotide binding protein 3 (HINT3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ33126; MGC22976; HINT4	FLJ33126; MGC22976; HINT4
Homo sapiens	RefSeq	NM_138571.3	ILMN_23568	HINT3	NM_138571.3	NM_138571.3		135114	21359981	NM_138571.3	HINT3	NP_612638.2	ILMN_2211630	0000610576	S	1212	ACTACACAATGATCTCTGATTTTGCTGAGGGAAGGAATTATATATGTGCC	6	+	126340990-126341039	6q22.32a	Homo sapiens histidine triad nucleotide binding protein 3 (HINT3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ33126; MGC22976; HINT4	FLJ33126; MGC22976; HINT4
Homo sapiens	RefSeq	XM_931737.1	ILMN_177360	FRMPD2L2	NM_001042516.1	NM_001042516.1		728603	110346448	NM_001042516.1	FRMPD2L2	NP_001035981.1	ILMN_1776569	0006060598	A	685	GGTGCGCTGCCTGAGATGGAGCAGGAATGGCAGACACCTGAACTCTCAGC	10	-	46664230-46664247:46669181-46669212	10q11.21d	Homo sapiens FERM and PDZ domain containing 2 like 2 (FRMPD2L2), transcript variant 4, mRNA.				bA556L1.2; PDZK5B; PDZD5B	
Homo sapiens	RefSeq	NM_001042516.1	ILMN_177360	FRMPD2L2	NM_001042516.1	NM_001042516.1		728603	110346448	NM_001042516.1	FRMPD2L2	NP_001035981.1	ILMN_2309733	0001470554	A	289	AGGAGTACACAGCAGTGTCCTTCTGCTAATGACAGCATGGGAGATGAACG	10	-	46673601-46673650	10q11.21d	Homo sapiens FERM and PDZ domain containing 2 like 2 (FRMPD2L2), transcript variant 4, mRNA.				bA556L1.2; PDZK5B; PDZD5B	bA556L1.2; PDZK5B; PDZD5B
Homo sapiens	RefSeq	NM_001042516.1	ILMN_177360	FRMPD2L2	NM_001042516.1	NM_001042516.1		728603	110346448	NM_001042516.1	FRMPD2L2	NP_001035981.1	ILMN_2240811	0006110088	I	94	GGCAGGGTCCTCCTGGAAGGGAACCTCCTGCAGCCTCAAGCACCAGGTCA	10	-	46675572-46675621	10q11.21d	Homo sapiens FERM and PDZ domain containing 2 like 2 (FRMPD2L2), transcript variant 4, mRNA.				bA556L1.2; PDZK5B; PDZD5B	bA556L1.2; PDZK5B; PDZD5B
Homo sapiens	RefSeq	XM_926981.1	ILMN_177360	FRMPD2L2	NM_001042516.1	NM_001042516.1		728603	110346448	NM_001042516.1	FRMPD2L2	NP_001035981.1	ILMN_1739631	0007400088	I	97	AGGGTCCTCCTGGAAGGGAACCTCCTGCAGCCTCAAGCACCAGGTCATGA	10	-	46675569-46675618	10q11.21d	Homo sapiens FERM and PDZ domain containing 2 like 2 (FRMPD2L2), transcript variant 4, mRNA.				bA556L1.2; PDZK5B; PDZD5B	
Homo sapiens	RefSeq	NM_018439.1	ILMN_182121	IMPACT	NM_018439.1	NM_018439.1		55364	8923818	NM_018439.1	IMPACT	NP_060909.1	ILMN_2043845	0006200204	S	3142	GGCTCGTCTTGAGCTCCTGGCCTCAATCGATCTTCCTGCCAAGGTTTTGG	18	+	20286949-20286998	18q11.2c	Homo sapiens Impact homolog (mouse) (IMPACT), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC33718	MGC33718
Homo sapiens	RefSeq	NM_001013691.1	ILMN_21704	ZNF833	NM_001013691.2	NM_001013691.2		401898	149363668	NM_001013691.2	ZNF833	NP_001013713.1	ILMN_1771447	0001710209	S	1170	GGGGTTCACACTGGAGAGAAACCCTATGAATGCAGAACGTGGAAAAGCCT	19	+	11657549-11657598	19p13.2a	Homo sapiens zinc finger protein 833 (ZNF833), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XR_039041.1	ILMN_344805	LOC728031	XR_039041.1	XR_039041.1		728031	169206387	XR_039041.1	LOC728031		ILMN_3287068	0002230725	M	733	AAGGCGGTGACCAAGGAGGAATTTCAGGGTGAATGGACTGCTCCAGCTCC				13q12.11b	PREDICTED: Homo sapiens misc_RNA (LOC728031), miscRNA.					
Homo sapiens	RefSeq	TUBB	ILMN_8135	TUBB2A	NM_001069.2	NM_001069.2		7280	68299771	NM_001069.2	TUBB2A	NP_001060.1	ILMN_2038775	0000450292	S	1401	GAGGAGGGCGAGGACGAGGCTTAAAAACTTCTCAGATCAATCGTGCATCC	6	-	3154070-3154096:3154097-3154119	6p25.2b	Homo sapiens tubulin, beta 2A (TUBB2A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17373842] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	TUBB; TUBB2; dJ40E16.7	TUBB2; dJ40E16.7; TUBB
Homo sapiens	RefSeq	NM_182984.3	ILMN_1632	TRMT2A	NM_182984.3	NM_182984.3		27037	51173879	NM_182984.3	TRMT2A	NP_892029.2	ILMN_2310075	0007150291	A	2504	GATACTTAAACTTGAGGAGAGGCAGAGAGAGGTCTGGGAACTGCACCAGC	22	-	20099625-20099674	22q11.21d	Homo sapiens TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) (TRMT2A), transcript variant 2, mRNA.				MGC102728	MGC102728
Homo sapiens	RefSeq	NM_002593.2	ILMN_13969	PCOLCE	NM_002593.2	NM_002593.2		5118	7262388	NM_002593.2	PCOLCE	NP_002584.1	ILMN_1707070	0004120386	S	1197	GGACCTGCCAACTCCACCCACTGGTGCCTCCCTGAAGTTTTACGTGCCTT	7	+	100043290-100043339	7q22.1c	Homo sapiens procollagen C-endopeptidase enhancer (PCOLCE), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7523404] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCPE	PCPE
Homo sapiens	RefSeq	XM_001133570.1	ILMN_174022	LOC729332	XM_001133570.1	XM_001133570.1		729332	113413401	XM_001133570.1	LOC729332	XP_001133570.1	ILMN_3227992	0003420673	A	270	CCTCTTACACAAAACTGTCATCCACAAGGATGTCTTCAGAGATCCTGCTC	2	+	206613670-206613719	2q33.3b	PREDICTED: Homo sapiens hypothetical LOC729332 (LOC729332), mRNA.					
Homo sapiens	RefSeq	NM_013362.1	ILMN_15780	ZNF225	NM_013362.1	NM_013362.1		7768	7019592	NM_013362.1	ZNF225	NP_037494.1	ILMN_1674064	0000450687	S	2200	ACTACTTCAATGTGAGGACTGTGGGAAGAGCATTGTGCACAGTTCATGCC	19	+	49328557-49328606	19q13.31b	Homo sapiens zinc finger protein 225 (ZNF225), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC119735	MGC119735
Homo sapiens	RefSeq	NM_006469.4	ILMN_26781	IVNS1ABP	NM_006469.4	NM_006469.4		10625	54144638	NM_006469.4	IVNS1ABP	NP_006460.2	ILMN_1717877	0005560338	A	3846	CAGAAGATGAAGCACACAGGAACCTAATGGGCCAACTGGGATGAGGTGAC	1	-	185265823-185265872	1q25.3g	Homo sapiens influenza virus NS1A binding protein (IVNS1ABP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 9696811] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9696811] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 9696811] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9696811] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9696811] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ36593; FLJ35593; KIAA0850; FLARA3; FLJ10069; NS1-BP; NS-1; DKFZp686K06216; ND1; HSPC068; FLJ10962; FLJ10411; NS1BP	FLJ36593; FLJ35593; KIAA0850; FLARA3; FLJ10069; NS1-BP; NS-1; DKFZp686K06216; ND1; HSPC068; FLJ10962; FLJ10411; NS1BP
Homo sapiens	RefSeq	NM_006469.4	ILMN_26781	IVNS1ABP	NM_006469.4	NM_006469.4		10625	54144638	NM_006469.4	IVNS1ABP	NP_006460.2	ILMN_2397750	0004280228	A	3131	GTGGCAGGCTGGAGTTATTGAAGCAGAGTGGCAGTCTTCAGTTTGCAGAG	1	-	185266538-185266587	1q25.3g	Homo sapiens influenza virus NS1A binding protein (IVNS1ABP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 9696811] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9696811] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 9696811] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9696811] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9696811] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ36593; FLJ35593; KIAA0850; FLARA3; FLJ10069; NS1-BP; NS-1; DKFZp686K06216; ND1; HSPC068; FLJ10962; FLJ10411; NS1BP	FLJ36593; FLJ35593; KIAA0850; FLARA3; FLJ10069; NS1-BP; NS-1; DKFZp686K06216; ND1; HSPC068; FLJ10962; FLJ10411; NS1BP
Homo sapiens	RefSeq	XM_001130731.2	ILMN_183014	LOC729159	XM_001130731.2	XM_001130731.2		729159	169210492	XM_001130731.2	LOC729159	XP_001130731.1	ILMN_3229415	0003310180	A	402	CTGCGCTGTCTGCTCGCAACTCCACGATGTTTGGACACCTCAGGCCCCTG				16q21b	PREDICTED: Homo sapiens UPF0607 protein ENSP00000381418-like (LOC729159), mRNA.					
Homo sapiens	RefSeq	NM_203433.1	ILMN_13497	PSMG1	NM_203433.1	NM_203433.1		8624	44680113	NM_203433.1	PSMG1	NP_982257.1	ILMN_1659285	0001010168	A	667	GCGTGTTGTCCATTGCTAGAACAACCGAATATAGTACACGACCTTCCTGC	21	-	40550379-40550428	21q22.2a	Homo sapiens proteasome (prosome, macropain) assembly chaperone 1 (PSMG1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15670775] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15590417] [evidence IDA]	The aggregation, arrangement and bonding together of a mature, active proteasome complex [goid 43248] [pmid 16251969] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16251969] [evidence IPI]	C21LRP; PAC1; DSCR2; LRPC21	C21LRP; PAC1; DSCR2; LRPC21
Homo sapiens	Unigene	Hs.561033	ILMN_114605	HS.561033	Hs.561033		Hs.561033		19050202	BM728869			ILMN_1857523	0002140296	S	311	GAATCCGATGGTCCTCGAAACATGGAAAGTCTGCTGTCACGCTGCACGCC	21	+	27881286-27881335		UI-E-EO1-aiv-n-13-0-UI.r1 UI-E-EO1 Homo sapiens cDNA clone UI-E-EO1-aiv-n-13-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_021928.2	ILMN_14718	SPCS3	NM_021928.2	NM_021928.2		60559	158518425	NM_021928.2	SPCS3	NP_068747.1	ILMN_3307700	0003780600	S	498	TGGTCTCAAGGGAAACAGGAATGTCACTTTGACCCTGTCTTGGAACGTCG				4q34.2a	Homo sapiens signal peptidase complex subunit 3 homolog (S. cerevisiae) (SPCS3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A multi subunit protease complex located in the endoplasmic reticulum membrane that cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space [goid 5787] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DKFZp564J1864; SPC22/23; SPC3; FLJ22649; PRO3567; YLR066W	DKFZp564J1864; SPC22/23; SPC3; FLJ22649; PRO3567; YLR066W
Homo sapiens	RefSeq	NM_021245.2	ILMN_162013	MYOZ1	NM_021245.2	NM_021245.2		58529	21359948	NM_021245.2	MYOZ1	NP_067068.1	ILMN_1731157	0005290240	S	1403	CCTTTACTCCAAGTCCCCACTCCACGCATCCTTCCTCACCAACTCAGAGC	10	-	75391500-75391549	10q22.2a	Homo sapiens myozenin 1 (MYOZ1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Formation of myofibrils, the repeating units of striated muscle [goid 30239] [pmid 11114196] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16076904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11171996] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11114196] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11842093] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10427098] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16076904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10984498] [evidence IPI]; Interacting selectively with a family of FATZ proteins, filamin-, actinin-, and telethonin-binding proteins of the Z-disc of striated muscle. FATZ proteins are located in the Z-disc of the sarcomere and are involved in a complex network of interactions with other Z-band components [goid 51373] [pmid 10984498] [evidence IDA]	FATZ; MYOZ; CS-2	FATZ; myozenin; MYOZ; CS-2
Homo sapiens	RefSeq	XM_001724642.1	ILMN_345192	LOC100133469	XM_001724642.1	XM_001724642.1		100133469	169207536	XM_001724642.1	LOC100133469	XP_001724694.1	ILMN_3287464	0003830168	M	84	TCGTGTGTGTCACCCTTGCAATGTGTTCCTGACAGCCCATGGAAGCGGGC					PREDICTED: Homo sapiens hypothetical protein LOC100133469 (LOC100133469), mRNA.					
Homo sapiens	RefSeq	NM_181707.1	ILMN_27074	C17ORF64	NM_181707.1	NM_181707.1		124773	32698787	NM_181707.1	C17orf64	NP_859058.1	ILMN_1717579	0005270722	S	592	TGGGGGCTGCACAGCAACATCAGCGGCATGAAGGAGCGGCTGTCCAACAT	17	+	55861586-55861635	17q23.2a	Homo sapiens chromosome 17 open reading frame 64 (C17orf64), mRNA.					
Homo sapiens	RefSeq	XM_001715234.1	ILMN_344862	LOC100131738	XM_001715234.1	XM_001715234.1		100131738	169171484	XM_001715234.1	LOC100131738	XP_001715286.1	ILMN_3210604	0006330543	A	2021	CCCCGCTGATGGCCTTGACTCAACCTCACAGAAAAAAGACTCAGCCGAGA					PREDICTED: Homo sapiens similar to hCG2014363 (LOC100131738), mRNA.					
Homo sapiens	RefSeq	NM_003632.1	ILMN_6876	CNTNAP1	NM_003632.1	NM_003632.1		8506	4505462	NM_003632.1	CNTNAP1	NP_003623.1	ILMN_1692398	0004570358	S	5115	AGGAACCCTCTTTCCTCCGCTCAGAGATGCTGCTTCATTTACCCAGGAGG	17	+	38105198-38105247	17q21.31a	Homo sapiens contactin associated protein 1 (CNTNAP1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9118959] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9118959] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9118959] [evidence TAS]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9118959] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	P190; NRXN4; CNTNAP; CASPR	P190; NRXN4; CNTNAP; CASPR
Homo sapiens	RefSeq	XM_929928.1	ILMN_45618	LOC646960	XM_939623.2	XM_939623.2		646960	113414306	XM_939623.2	LOC646960	XP_944716.1	ILMN_1674447	0003370079	S	277	GAGCGCCCAGTGGGCAATAAACCGAGTGGCGATGGAGATCCAGCACAGAT				2q37.1c	PREDICTED: Homo sapiens similar to transmembrane protease, serine 9 (LOC646960), mRNA.					
Homo sapiens	RefSeq	NM_020116.2	ILMN_178729	FSTL5	NM_020116.2	NM_020116.2		56884	34222114	NM_020116.2	FSTL5	NP_064501.1	ILMN_1737981	0001070162	S	4734	GTCTGTCGCATACATCCTTCTTTTGTAGCTTACACCATGTGGATGCTCTG	4	-	162524545-162524594	4q32.2a-q32.2b	Homo sapiens follistatin-like 5 (FSTL5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA1263; DKFZp566D234	KIAA1263; DKFZp566D234
Homo sapiens	RefSeq	NM_022562.2	ILMN_23020	GH1	NM_022562.2	NM_022562.2		2688	20809252	NM_022562.2	GH1	NP_072056.1	ILMN_1781261	0001340706	A	70	CAGAGGCTGGAAGATGGCAGCCCCCGGACTGGGCAGATCTTCAAGCAGAC	17	-	61994819-61994866:61996127-61996128	17q23.3b	Homo sapiens growth hormone 1 (GH1), transcript variant 5, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8943276] [evidence TAS]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [pmid 9144201] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with the growth hormone receptor [goid 5131] [pmid 6303755] [evidence IDA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 8943276] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8943276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7984244] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	hGH-N; GHN; GH-N; GH	hGH-N; GHN; GH-N; GH
Homo sapiens	RefSeq	NR_015367.2	ILMN_357028	LOC550643	NR_015367.2	NR_015367.2		550643	171460991	NR_015367.2	LOC550643		ILMN_3247645	0001440753	S	576	TGCCTGTGAGATGGTCCTGCAGCAGCCAACCAGTGAACTCTTTTGGTGAC	X	+	56843886-56843935	Xp11.1b	Homo sapiens hypothetical LOC550643 (LOC550643), non-coding RNA.					
Homo sapiens	RefSeq	XM_927551.1	ILMN_23670	KRTAP3-2	NM_031959.2	NM_031959.2		83897	15812204	NM_031959.2	KRTAP3-2	NP_114165.1	ILMN_1662497	0004890541	S	382	CTTCAGTATTCACTTGCCTCAGTAGTTTGCCAGATGTTAAGGTAGACCAG	17	-	39155707-39155756	17q21.2a	Homo sapiens keratin associated protein 3-2 (KRTAP3-2), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	KAP3.2; KRTAP3.2	
Homo sapiens	RefSeq	NM_033185.2	ILMN_23670	KRTAP3-2	NM_031959.2	NM_031959.2		83897	15812204	NM_031959.2	KRTAP3-2	NP_114165.1	ILMN_1662081	0006580215	S	262	CTGGAGACCCTCAACCTCACCACCTTCACTCAGCCCTGCTGTGAGCCCTG	17	-	39155827-39155876	17q21.2a	Homo sapiens keratin associated protein 3-2 (KRTAP3-2), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	KAP3.2; KRTAP3.2	KRTAP3.3; MGC95374; KAP3.3
Homo sapiens	RefSeq	NM_031959.2	ILMN_23670	KRTAP3-2	NM_031959.2	NM_031959.2		83897	15812204	NM_031959.2	KRTAP3-2	NP_114165.1	ILMN_2108025	0003940594	S	131	CCAGCACCTGCCCACACACAGTTTGGTTACTGGAGCCCATCTGCTGTGAC	17	-	39155958-39156007	17q21.2a	Homo sapiens keratin associated protein 3-2 (KRTAP3-2), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	KAP3.2; KRTAP3.2	KAP3.2; KRTAP3.2
Homo sapiens	RefSeq	NM_145277.3	ILMN_11433	HFE2	NM_145277.3	NM_145277.3		148738	44662822	NM_145277.3	HFE2	NP_660320.3	ILMN_2367694	0002000280	A	1214	CTGCCAGACTTAGAGAAGCTGCATCTCTTCCCCTCAGATGCTGGGGTTCC	1	+	144128174-144128223	1q21.1b	Homo sapiens hemochromatosis type 2 (juvenile) (HFE2), transcript variant b, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			HFE2A; MGC23953; RGMC; JH; HJV	HFE2A; MGC23953; RGMC; JH; HJV
Homo sapiens	Unigene	Hs.551143	ILMN_110505	HS.551143	Hs.551143		Hs.551143		10836611	AV727190			ILMN_1859207	0006960075	S	630	TGCATTGGCTTTGCTGCTCAGTTTGAAAGCTAGGGGGATCTCTTAGAGCC	9	+	19222965-19223014		AV727190 HTC Homo sapiens cDNA clone HTCAQG06 5, mRNA sequence					
Homo sapiens	RefSeq	XM_941285.1	ILMN_36630	LOC651987	XM_941285.1	XM_941285.1		651987	89062308	XM_941285.1	LOC651987	XP_946378.1	ILMN_1669458	0004920132	S	17	CCTCGTTATCCACTCGCCGCGGCCTCCCAAAGTGCTGGGATTATAGATGT					PREDICTED: Homo sapiens similar to pyruvate dehydrogenase phosphatase regulatory subunit (LOC651987), mRNA.					
Homo sapiens	RefSeq	XR_016295.2	ILMN_184006	LOC134505	XR_016295.2	XR_016295.2		134505	169167491	XR_016295.2	LOC134505		ILMN_3281591	0003710445	M	356	TGTGTATCTGCCCTGTCGTGGGTATCACTTACCAGCACATCGACCACTGG	5	+	102396396-102396445	5q21.1d	PREDICTED: Homo sapiens similar to hCG39609 (LOC134505), mRNA.					
Homo sapiens	RefSeq	NM_002130.4	ILMN_18980	HMGCS1	NM_002130.6	NM_002130.6		3157	148298763	NM_002130.6	HMGCS1	NP_002121.4	ILMN_1797728	0005270112	S	3343	GCCGGCAATGGGCAGGCCTGCAAATACTGGCACAGAGCATTAATCATACA	5	-	43325308-43325357	5p12c	Homo sapiens 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) (HMGCS1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7913309] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7913309] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7913309] [evidence EXP]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7913309] [evidence NAS]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]	Catalysis of the reaction: acetyl-CoA + H2O + acetoacetyl-CoA = (S)-3-hydroxy-3-methylglutaryl-CoA + CoA [goid 4421] [pmid 7913309] [evidence TAS]; Catalysis of the reaction: acetyl-CoA + H2O + acetoacetyl-CoA = (S)-3-hydroxy-3-methylglutaryl-CoA + CoA [goid 4421] [pmid 7913309] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC90332; HMGCS	MGC90332; HMGCS
Homo sapiens	RefSeq	NM_002438.1	ILMN_165835	MRC1	NM_002438.1	NM_002438.1		4360	4505244	NM_002438.1	MRC1	NP_002429.1	ILMN_2203926	0001980324	S	5127	TAGATAATGTGAAATAAACATTAAAGACAAGGTCTATTTTTAATAAAAAA	10	+	18240053-18240097	10p12.33c-p12.33b	Homo sapiens mannose receptor, C type 1 (MRC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2373685] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1294118] [evidence TAS]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 2373685] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 2373685] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [pmid 2373685] [evidence TAS]	CD206; CLEC13D	CD206; CLEC13D
Homo sapiens	RefSeq	NM_006567.2	ILMN_19613	FARS2	NM_006567.3	NM_006567.3		10667	126513133	NM_006567.3	FARS2	NP_006558.1	ILMN_1793732	0005690279	S	1540	ACATCCAAAGACGCACAAGACCAGCCACTGCTACCGCATCACGTACCGCC	6	+	5368909-5368958	6p25.1b	Homo sapiens phenylalanyl-tRNA synthetase 2, mitochondrial (FARS2), nuclear gene encoding mitochondrial protein, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10329163] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6432] [pmid 10329163] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [pmid 10329163] [evidence IDA]	Interacting selectively with transfer RNA [goid 49] [pmid 10329163] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) [goid 4826] [pmid 10329163] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	dJ520B18.2; FARS1; HSPC320; PheRS	dJ520B18.2; FARS1; HSPC320; PheRS
Homo sapiens	RefSeq	NM_015208.2	ILMN_26751	ANKRD12	NM_015208.3	NM_015208.3		23253	134948557	NM_015208.3	ANKRD12	NP_056023.3	ILMN_1661833	0007040132	S	8654	CAGTTCTCACTCTCTTAAATGGTACCTCAAAAAGCTGGAGCCTCTCTGCC	18	+	9255642-9255691	18p11.22c	Homo sapiens ankyrin repeat domain 12 (ANKRD12), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			ANCO1; FLJ20053; ANCO-2; KIAA0874; Nbla00144; GAC-1	ANCO1; FLJ20053; ANCO-2; KIAA0874; Nbla00144; GAC-1
Homo sapiens	RefSeq	XM_933730.1	ILMN_43967	LOC646585	XM_933730.1	XM_933730.1		646585	89059520	XM_933730.1	LOC646585	XP_938823.1	ILMN_1767369	0007570020	S	1	ATGGCCACAGGGGAGGGAGAGGACGTGGGCTGTCGCTTTAGGTTTGGCGG	X	-	36886328-36886377	Xp21.1a	PREDICTED: Homo sapiens hypothetical protein LOC646585 (LOC646585), mRNA.					
Homo sapiens	RefSeq	XM_945842.1	ILMN_41702	LOC650990	XM_945842.1	XM_945842.1		650990	88971072	XM_945842.1	LOC650990	XP_950935.1	ILMN_1672623	0007330154	I	1303	ATCTAAGAAAATGGTTTTTAATTCTTCCTAATCTTCAGGGAGTTCTTCCT					PREDICTED: Homo sapiens hypothetical protein LOC650989, transcript variant 1 (LOC650990), mRNA.					
Homo sapiens	RefSeq	XM_930618.1	ILMN_35269	LOC653056	XM_930618.1	XM_930618.1		653056	89024590	XM_930618.1	LOC653056	XP_935711.1	ILMN_1705326	0002650358	I	6972	GTAAGAAGCAATAGTTTCTCTTACTATTCTGAGAGCCTTATTCTACATCC	7	-	54418-54454:54455-54467	1q41e	PREDICTED: Homo sapiens similar to hypothetical gene supported by AK024248; AL137733, transcript variant 4 (LOC653056), mRNA.					
Homo sapiens	RefSeq	XM_001716201.1	ILMN_341732	LOC100133584	XM_001716201.1	XM_001716201.1		100133584	169214355	XM_001716201.1	LOC100133584	XP_001716253.1	ILMN_3241008	0006480347	S	2325	ACGAAGGTGGAGAAAGAGGAAAGAGGCCAAGAGAGGTGACAAACCAAAGG					PREDICTED: Homo sapiens hypothetical protein LOC100133584 (LOC100133584), mRNA.					
Homo sapiens	RefSeq	NR_003689.1	ILMN_345891	SNORD123	NR_003689.1	NR_003689.1		100113384	154800502	NR_003689.1	SNORD123		ILMN_3238972	0000830286	S	27	CTGGGGCGCTGATTCATGTGACTTGAAAAATGCCATCCATTTCCTGATTC	5	+	9548965-9549014	5p15.2d	Homo sapiens small nucleolar RNA, C/D box 123 (SNORD123), small nucleolar RNA.					
Homo sapiens	RefSeq	NM_006215.2	ILMN_24341	SERPINA4	NM_006215.2	NM_006215.2		5267	21361301	NM_006215.2	SERPINA4	NP_006206.2	ILMN_1759631	0001190465	S	1366	TCATCTGTTCCAAGCAGGAGGATGTGGCAGGGGAGGGCTGGGAGTGAGTA	14	+	94105701-94105750	14q32.13a-q32.13b	Homo sapiens serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4 (SERPINA4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 1334488] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8227002] [evidence TAS]	KST; PI4; KAL; kallistatin; KLST	KST; PI4; KAL; kallistatin; KLST
Homo sapiens	RefSeq	XM_374705.3	ILMN_307191	LOC641948	NM_001085396.1	NM_001085396.1		641948	145966902	NM_001085396.1	LOC641948	NP_001078865.1	ILMN_1653650	0004010500	S	727	GGCAAACCAAAGCTGGAGCTGAACCTGCACCACACGGTCTATGCCAGTTC					Homo sapiens similar to polycystic kidney disease 1 like 3 (LOC641948), mRNA.					
Homo sapiens	RefSeq	NM_016474.3	ILMN_13337	C3ORF19	NM_016474.3	NM_016474.3		51244	31652250	NM_016474.3	C3orf19	NP_057558.2	ILMN_1750144	0006960170	S	2739	CCCCTAGACAGTCTTTTTAGTGCCCTCTGCTCTCAGTCTTGTTGCCCTAG	3	+	14688965-14689014	3p25.1a	Homo sapiens chromosome 3 open reading frame 19 (C3orf19), mRNA.				FLJ33839	FLJ33839
Homo sapiens	RefSeq	NM_001004462.1	ILMN_180241	OR10G4	NM_001004462.1	NM_001004462.1		390264	52317171	NM_001004462.1	OR10G4	NP_001004462.1	ILMN_1810020	0004610082	S	750	CTTTGTTCCCTGTGTTGTCATTTATCTGAGGCCAGGCTCCATGGATGCCA	11	+	123392241-123392290	11q24.1c	Homo sapiens olfactory receptor, family 10, subfamily G, member 4 (OR10G4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-278	OR11-278
Homo sapiens	RefSeq	XM_940141.1	ILMN_46431	LOC440607	XM_940141.1	XM_940141.1		440607	89066463	XM_940141.1	LOC440607	XP_945234.1	ILMN_1760133	0006650156	I	300	CTTGGACCAGGAGGGCCGGAAACTACAAGGTCTTCCTCTGCGTTCTCTCC				1p11.2a	PREDICTED: Homo sapiens Fc-gamma receptor I B2 (LOC440607), mRNA.					
Homo sapiens	RefSeq	XR_041507.1	ILMN_350242	FAM75A6	XR_041507.1	XR_041507.1		389730	169177201	XR_041507.1	FAM75A6		ILMN_3194147	0001340687	A	137	CTTTCACAACTGCAGAGCCTCCTGGGGCCACACCTTGACAAAGGTGACTT	9	-	43568341-43568374:43568630-43568645	9p11.2c	PREDICTED: Homo sapiens misc_RNA (FAM75A6), miscRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_020768.1	ILMN_21074	KCTD16	NM_020768.2	NM_020768.2		57528	142368303	NM_020768.2	KCTD16	NP_065819.1	ILMN_1793378	0005550315	S	4818	GCCTTCTGGGAAATCCCGCGATACTAAAATCCAGTGAGCTTTGGGAGATC	5	+	143836772-143836821	5q32a	Homo sapiens potassium channel tetramerisation domain containing 16 (KCTD16), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1317; DKFZp781A1155; MGC138167	KIAA1317; DKFZp781A1155; MGC138167
Homo sapiens	RefSeq	XR_037498.1	ILMN_344748	LOC100130715	XR_037498.1	XR_037498.1		100130715	169215736	XR_037498.1	LOC100130715		ILMN_3243419	0001340575	S	68	CAGGGCCAGGATCAGGGCCAGGTCTGTGCTAGGGCCAGCTCCAGATGAGG					PREDICTED: Homo sapiens misc_RNA (LOC100130715), miscRNA.					
Homo sapiens	RefSeq	XM_925939.1	ILMN_31744	LOC653080	XM_925939.1	XM_925939.1		653080	89028430	XM_925939.1	LOC653080	XP_931032.1	ILMN_1728098	0000070021	I	118	CCAACAGTGATGGCCCGCCGGCGCCGCGCTCGAATTTTCGCTGGGCCTCA	8	+	61269-61318	5q13.2b	PREDICTED: Homo sapiens similar to Beta-glucuronidase precursor, transcript variant 1 (LOC653080), mRNA.					
Homo sapiens	RefSeq	NM_032204.3	ILMN_24019	ASCC2	NM_032204.3	NM_032204.3		84164	34147616	NM_032204.3	ASCC2	NP_115580.2	ILMN_1679919	0001570523	S	2674	CAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGA	22	-	30184657-30184706	22q12.2a	Homo sapiens activating signal cointegrator 1 complex subunit 2 (ASCC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		ASC1p100	ASC1p100
Homo sapiens	RefSeq	NM_001012334.1	ILMN_167870	LOC732372	XM_001133029.1	XM_001133029.1		732372	113422832	XM_001133029.1	LOC732372	XP_001133029.1	ILMN_1724977	0005870053	I	438	CCAGGGCTGAGCCGGCCGTGGAGGGGAGCGGGTCCCGCGGGTTATACAGG					PREDICTED: Homo sapiens hypothetical protein LOC732372 (LOC732372), mRNA.					FLJ27379; MK; NEGF2
Homo sapiens	RefSeq	XR_039304.1	ILMN_335052	LOC729841	XR_039304.1	XR_039304.1		729841	169202984	XR_039304.1	LOC729841		ILMN_3297577	0003290390	M	550	CAGCCACCATCTCCAGAGCCCTGGGCAGCATTTTCCAGCAAGATATACGA				11q13.4b	PREDICTED: Homo sapiens misc_RNA (LOC729841), miscRNA.					
Homo sapiens	RefSeq	NM_001032730.1	ILMN_29650	USP48	NM_001032730.1	NM_001032730.1		84196	76257391	NM_001032730.1	USP48	NP_001027902.1	ILMN_1738572	0006980082	I	2164	CTGCTGACCCCTGATTTCTTAGAAATATCCCACATAATCCAGCTTATCCC	1	-	22054537-22054586	1p36.12b	Homo sapiens ubiquitin specific peptidase 48 (USP48), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	RAP1GA1; MGC132556; USP31; DKFZp762M1713; MGC14879	RAP1GA1; MGC132556; USP31; DKFZp762M1713; MGC14879
Homo sapiens	RefSeq	NM_182499.2	ILMN_165740	TDRD10	NM_182499.3	NM_182499.3		126668	148613863	NM_182499.3	TDRD10	NP_872305.3	ILMN_1751630	0005900333	S	1947	ACCTGCCCTGTCTTCTCGTACCCCTTTCACTCTTGAGGCCTGGGAGGTGA	1	+	152786863-152786912	1q21.3e	Homo sapiens tudor domain containing 10 (TDRD10), transcript variant 2, mRNA.				DKFZp434M202; RP11-61L14.3	DKFZp434M202; RP11-61L14.3
Homo sapiens	RefSeq	NM_022375.2	ILMN_26239	OCLM	NM_022375.2	NM_022375.2		10896	41352706	NM_022375.2	OCLM	NP_071770.1	ILMN_1668899	0003450403	S	442	TAGCTGCATTGCAGGTTTCAGGATTTGCAGGGTATGGGGATGTATCCACC	1	+	184636768-184636800:184636801-184636817	1q31.1a	Homo sapiens oculomedin (OCLM), mRNA.		The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10362512] [evidence TAS]		TISR	TISR
Homo sapiens	RefSeq	NM_001004311.1	ILMN_2818	FIGLA	NM_001004311.2	NM_001004311.2		344018	116517329	NM_001004311.2	FIGLA	NP_001004311.2	ILMN_1801927	0003310026	S	490	GTGCTTTCGGCTTGAAGAATGAAGAGGAAGGGCCTTGGGCAGATGGTGGC	2	-	70866129-70866178	2p13.3c	Homo sapiens folliculogenesis specific basic helix-loop-helix (FIGLA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 15044608] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 48599] [pmid 15044608] [evidence NAS]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15044608] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 15044608] [evidence IDA]		
Homo sapiens	RefSeq	NM_016243.2	ILMN_516	CYB5R1	NM_016243.2	NM_016243.2		51706	49574501	NM_016243.2	CYB5R1	NP_057327.2	ILMN_1729237	0001230025	S	1577	GCTGTTTGTGGCAGGAACCCCTGGCTGTGCAAATAAATGGGGCTGAGGCC	1	-	202931017-202931066	1q32.1d	Homo sapiens cytochrome b5 reductase 1 (CYB5R1), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	B5R.1; NQO3A2; humb5R2	B5R.1; NQO3A2; humb5R2
Homo sapiens	RefSeq	NM_002091.3	ILMN_28494	GRP	NM_001012513.1	NM_001012513.1		2922	60498998	NM_001012513.1	GRP	NP_001012531.1	ILMN_1777199	0001400053	A	406	CCCTGGGCAATCAGCAGCCTTCGTGGGATTCAGAGGATAGCAGCAACTTC	18	+	55043872-55043921	18q21.32a	Homo sapiens gastrin-releasing peptide (GRP), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8756537] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 3027901] [evidence NAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 8756537] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 3027901] [evidence NAS]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 8756537] [evidence IDA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	proGRP; GRP-10; BN; preproGRP	proGRP; GRP-10; BN; preproGRP
Homo sapiens	RefSeq	NM_001012513.1	ILMN_28494	GRP	NM_001012513.1	NM_001012513.1		2922	60498998	NM_001012513.1	GRP	NP_001012531.1	ILMN_2413323	0000160500	A	753	TCTAGGCTACCTGTTGGTTAGATTCAAGGCCCCGAGCTGTTACCATTCAC	18	+	55048907-55048956	18q21.32a	Homo sapiens gastrin-releasing peptide (GRP), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8756537] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 3027901] [evidence NAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 8756537] [evidence IDA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 3027901] [evidence NAS]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 8756537] [evidence IDA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	proGRP; GRP-10; BN; preproGRP	proGRP; GRP-10; BN; preproGRP
Homo sapiens	RefSeq	XM_379817.3	ILMN_33825	MGC13098	XM_379817.3	XM_379817.3		84820	89024872	XM_379817.3	MGC13098	XP_379817.3	ILMN_1712588	0006960400	A	990	CCTGTTGGCTGTCCTGTAACCACTCAATGGGTTCTTCTTTCCTGTTGCTC	7	-	43965722-43965771	7p13d	PREDICTED: Homo sapiens hypothetical protein MGC13098 (MGC13098), mRNA.					
Homo sapiens	RefSeq	NM_001039999.2	ILMN_41031	FAM83G	NM_001039999.2	NM_001039999.2		644815	115392149	NM_001039999.2	FAM83G	NP_001035088.2	ILMN_2122848	0001170273	S	2551	ACCTAAAGGCCAGGACGGGCGGTAGCCAGTGGGCCTCATCGGATTCTAAA	17	-	18874710-18874759	17p11.2e	Homo sapiens family with sequence similarity 83, member G (FAM83G), mRNA.				FLJ41564	FLJ41564
Homo sapiens	RefSeq	NM_001042400.1	ILMN_170204	CEP63	NM_001042400.1	NM_001042400.1		80254	109255238	NM_001042400.1	CEP63	NP_001035859.1	ILMN_2294294	0003130671	I	52	TATTAAAAGTGTGGGGGCAGTGGGCGGAACAAACGCGCCGACTACAGAGG	3	+	134204948-134204997	3q22.1e-q22.2a	Homo sapiens centrosomal protein 63kDa (CEP63), transcript variant 2, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]	MGC78416; FLJ13386	MGC78416; FLJ13386
Homo sapiens	RefSeq	NM_152784.3	ILMN_19217	TMEM146	NM_152784.3	NM_152784.3		257062	91598776	NM_152784.3	TMEM146	NP_689997.3	ILMN_3243788	0004880450	S	2184	GCATCTACGTGTATGGAGCATTCCCCGTGCAGCTGGTCTCTGCTGGAGTC	19	+	5724868-5724873:5727172-5727215	19p13.3b	Homo sapiens transmembrane protein 146 (TMEM146), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC39581	
Homo sapiens	RefSeq	NM_003849.1	ILMN_20951	SUCLG1	NM_003849.2	NM_003849.2		8802	109452590	NM_003849.2	SUCLG1	NP_003840.2	ILMN_1779616	0004150142	S	1155	CAGGAGTTGTGGTCAGTATGTCTCCTGCACAGCTGGGAACCACGATCTAC	2	-	84652541-84652590	2p11.2h	Homo sapiens succinate-CoA ligase, alpha subunit (SUCLG1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9128182] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 15234968] [evidence EXP]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ADP + phosphate + acetyl-CoA + oxaloacetate = ATP + citrate + CoA [goid 3878] [evidence IEA]; Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [evidence IEA]; Catalysis of the reaction: GTP + succinate + CoA = GDP + succinyl-CoA + phosphate [goid 4776] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ21114; SUCLA1	SUCLA1
Homo sapiens	RefSeq	NM_005454.2	ILMN_166962	CER1	NM_005454.2	NM_005454.2		9350	75677392	NM_005454.2	CER1	NP_005445.1	ILMN_2115143	0000770632	S	753	GGAGGAGTGCCAGTGCAAGGTGAAGACGGAGCATGAAGATGGACACATCC	9	-	14720134-14720183	9p22.3c	Homo sapiens cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis) (CER1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 17029022] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IEA]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC119895; MGC96951; MGC119894; DAND4	MGC119895; MGC96951; MGC119894; DAND4
Homo sapiens	RefSeq	XM_928224.1	ILMN_43766	LOC653583	XM_928224.2	XM_928224.2		653583	113428266	XM_928224.2	LOC653583	XP_933317.1	ILMN_1805853	0001050754	S	1111	CCCACTGCCGGAAAACTTGGACGCACCGCTTTGGAACTCTCCCGGGAATT	19	-	48671276-48671325	19q13.31a	PREDICTED: Homo sapiens similar to pleckstrin homology-like domain, family B, member 1 (LOC653583), mRNA.					
Homo sapiens	RefSeq	NM_016356.1	ILMN_8259	DCDC2	NM_016356.3	NM_016356.3		51473	117938306	NM_016356.3	DCDC2	NP_057440.2	ILMN_1712419	0006560674	S	1611	GGCAGTGGACAAGATGAGGCTGATGTAGACCCTCAAAGACCACCAAGGCC	6	-	24357844-24357893	6p22.2c-p22.2b	Homo sapiens doublecortin domain containing 2 (DCDC2), mRNA.		The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [pmid 16278297] [evidence NAS]; A defense response that is mediated by cells [goid 6968] [pmid 10601354] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		DCDC2A; RU2S; RU2	RU2S; RU2
Homo sapiens	RefSeq	XM_379228.2	ILMN_32060	LOC401093	XM_379228.2	XM_379228.2		401093	88965878	XM_379228.2	LOC401093	XP_379228.1	ILMN_1813055	0006960689	A	3190	TTCCCTCAGTGCCAGGAGAACATTATGGTTTCTCCTATTTCTGTGAAGTG	3	-	153466324-153466373	3q25.1c	PREDICTED: Homo sapiens hypothetical LOC401093 (LOC401093), mRNA.					
Homo sapiens	Unigene	Hs.550118	ILMN_110171	HS.550118	Hs.550118		Hs.550118		3648844	AI141387			ILMN_1884983	0001980673	S	76	GTCAGTCTAGAAGGAGACAGATAGTAAGTGGGAGGCACCCCCGCCAACCC	1	-	8104974-8105023		oy41f08.s1 Soares_parathyroid_tumor_NbHPA Homo sapiens cDNA clone IMAGE:1668423 3, mRNA sequence					
Homo sapiens	RefSeq	XR_037788.1	ILMN_352420	LOC100133213	XR_037788.1	XR_037788.1		100133213	169177346	XR_037788.1	LOC100133213		ILMN_3295894	0004260608	M	528	GGGCAGTACAGGGCCAGATCCACGGCAGGCACAGGGCAAAGCCAGGCCCA	9	+	42792634-42792683	9p11.2d	PREDICTED: Homo sapiens misc_RNA (LOC100133213), miscRNA.					
Homo sapiens	RefSeq	NM_007320.1	ILMN_26736	RANBP3	NM_007320.1	NM_007320.1		8498	6466461	NM_007320.1	RANBP3	NP_015559.1	ILMN_2318811	0002630719	A	1645	CACAGTCTGGACCCGCACGTCCTGTTCAAAAGCAGACTCGGGAACTGCCT	19	-	5868446-5868495	19p13.3b	Homo sapiens RAN binding protein 3 (RANBP3), transcript variant RANBP3-b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9637251] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances within a cell [goid 46907] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11932251] [evidence IPI]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [pmid 9637251] [evidence TAS]	DKFZp586I1520	DKFZp586I1520
Homo sapiens	Unigene	Hs.535906	ILMN_103010	HS.535906	Hs.535906		Hs.535906		11307260	BF336512			ILMN_1872472	0004010576	S	199	GCAGAGATCAAAGAGAGCAAAGGAGGGGTAACAGCCAGGGCCAGCCTTAA	8	+	131079860-131079909		RC2-CT0522-150900-012-g04 CT0522 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_014581.2	ILMN_26792	OBP2B	NM_014581.2	NM_014581.2		29989	50593012	NM_014581.2	OBP2B	NP_055396.1	ILMN_1700666	0003450286	S	2	GCCCAGTGACCTGCCGAGGTCGGCAGCACAGAGCTCTGGAGATGAAGACC	9	-	136084577-136084586:136084587-136084626	9q34.2a	Homo sapiens odorant binding protein 2B (OBP2B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 10607840] [evidence NAS]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [pmid 10607840] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with an odorant, any substance capable of stimulating the sense of smell [goid 5549] [pmid 10607840] [evidence NAS]	hOBPIIb; MGC119022	hOBPIIb; MGC119022
Homo sapiens	RefSeq	NM_002465.2	ILMN_23645	MYBPC1	NM_206819.1	NM_206819.1		4604	46049124	NM_206819.1	MYBPC1	NP_996555.1	ILMN_1752075	0000840017	A	3666	CTGAGGAATACTGAGGGAGGGCCTGGCTACTGTCTCTCTGCACTCTGCTG	12	+	100603578-100603627	12q23.2a	Homo sapiens myosin binding protein C, slow type (MYBPC1), transcript variant 2, mRNA.	Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [pmid 1429890] [evidence ISS]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8375400] [evidence TAS]; Interacting selectively with titin, any of a family of giant proteins found in striated and smooth muscle. In striated muscle, single titin molecules span half the sarcomere, with their N- and C-termini in the Z-disc and M-line, respectively [goid 31432] [pmid 1429890] [evidence ISS]	slow-type; MYBPCS; MYBPCC	slow-type; MYBPCS; MYBPCC
Homo sapiens	RefSeq	XM_928616.1	ILMN_31564	LOC645600	XM_928616.1	XM_928616.1		645600	89031346	XM_928616.1	LOC645600	XP_933709.1	ILMN_1721869	0006330632	S	47	AGAAAGGTCTGCCTGCATTTTTTGGCTTTGGGCTCTTCTCCACTGTCACC	10	-	75140238-75140281:75141662-75141667		PREDICTED: Homo sapiens hypothetical protein LOC645600 (LOC645600), mRNA.					
Homo sapiens	RefSeq	XM_495863.2	ILMN_173303	GVIN1	XM_495863.3	XM_495863.3		387751	113422266	XM_495863.3	GVIN1	XP_495863.2	ILMN_1668526	0001740050	A	8252	CACCCTGTTCTTCCCTGGTATGTTGGCAATTCCCTGCGCATGCTAAGAAA	11	-	6691459-6691508	11p15.4c	PREDICTED: Homo sapiens GTPase, very large interferon inducible 1 (GVIN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_017791.1	ILMN_15043	FLVCR2	NM_017791.1	NM_017791.1		55640	8923349	NM_017791.1	FLVCR2	NP_060261.1	ILMN_2204876	0001510026	S	3391	GTCCACGTTTTCGGCAGAAGTAGTGAGTCAGTGTGGAAGAGAGGTGAGGG	14	+	75184054-75184103	14q24.3b	Homo sapiens feline leukemia virus subgroup C cellular receptor family, member 2 (FLVCR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	FLVCR2; C14orf58; FLJ20371; CCT	FLVCR2; C14orf58; FLJ20371; CCT
Homo sapiens	RefSeq	NM_032732.2	ILMN_137641	IL17RC	NM_032732.2	NM_032732.2		84818	24430193	NM_032732.2	IL17RC	NP_116121.1	ILMN_1689357	0004480414	I	1732	CGGGGAGCCAGGCCTGTGCCAGCTCACCTCTTCCCTCCCCATCTGTTTTC	3	+	9949579-9949628	3p25.3c	Homo sapiens interleukin 17 receptor C (IL17RC), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IL17-RL; MGC10763	IL17-RL; MGC10763
Homo sapiens	RefSeq	NM_001077269.1	ILMN_164646	WIPF1	NM_001077269.1	NM_001077269.1		7456	116284397	NM_001077269.1	WIPF1	NP_001070737.1	ILMN_2262957	0000290088	I	36	CCGGCTCAGCCCTGCGGACCCCGGGAGAAGTTTCCCAGAAAAAATGCCCA	2	-	175547542-175547591	2q31.1g	Homo sapiens WAS/WASL interacting protein family, member 1 (WIPF1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9405671] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9405671] [evidence TAS]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 9405671] [evidence TAS]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 9405671] [evidence TAS]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [pmid 9405671] [evidence TAS]	WIP; WASPIP; PRPL-2; MGC111041	WIP; WASPIP; PRPL-2; MGC111041
Homo sapiens	RefSeq	NM_001077269.1	ILMN_164646	WIPF1	NM_001077269.1	NM_001077269.1		7456	116284397	NM_001077269.1	WIPF1	NP_001070737.1	ILMN_2351298	0006860196	A	3053	GGATCTATGCAAATATAGCTCCACTAAAGGACCATAGGGAAGAGCCAGCC	2	-	175425848-175425897	2q31.1g	Homo sapiens WAS/WASL interacting protein family, member 1 (WIPF1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9405671] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9405671] [evidence TAS]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 9405671] [evidence TAS]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 9405671] [evidence TAS]; Interacting selectively with profilin, an actin-binding protein that forms a complex with G-actin and prevents it from polymerizing to form F-actin [goid 5522] [pmid 9405671] [evidence TAS]	WIP; WASPIP; PRPL-2; MGC111041	WIP; WASPIP; PRPL-2; MGC111041
Homo sapiens	RefSeq	NM_001986.2	ILMN_25435	ETV4	NM_001986.2	NM_001986.2		2118	118918427	NM_001986.2	ETV4	NP_001977.1	ILMN_2341661	0000990577	A	1922	GCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTC	17	-	41605498-41605547	17q21.31b	Homo sapiens ets variant 4 (ETV4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PEA3; E1A-F; E1AF; PEAS3	E1A-F; PEA3; E1AF; PEAS3
Homo sapiens	RefSeq	NM_001004052.1	ILMN_20874	OR52B2	NM_001004052.1	NM_001004052.1		255725	53828682	NM_001004052.1	OR52B2	NP_001004052.1	ILMN_1786946	0003450564	S	678	AGTGTTTCGTTTGCCCTCCCAGGATGCTCGGCACAAGGCCCTCAGCACTT	11	-	6190829-6190878	11p15.4c	Homo sapiens olfactory receptor, family 52, subfamily B, member 2 (OR52B2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-70	OR11-70
Homo sapiens	RefSeq	XM_930343.1	ILMN_33206	LOC644789	XM_930343.1	XM_930343.1		644789	89052338	XM_930343.1	LOC644789	XP_935436.1	ILMN_1657985	0000510113	S	420	GAATACACTCTGGAGAAAGACCTTATAAATGTAAGCTATGTGGGAAAGGC	19	+	11877621-11877670		PREDICTED: Homo sapiens similar to zinc finger protein 700 (LOC644789), mRNA.					
Homo sapiens	RefSeq	XM_941361.1	ILMN_45646	LOC652046	XM_941361.1	XM_941361.1		652046	89037020	XM_941361.1	LOC652046	XP_946454.1	ILMN_1702941	0003290064	S	127	GTCTGGGAGTTTTGCGTTGTTGACTGCCCAGCTTGTCGTCTGCTACCCGA					PREDICTED: Homo sapiens similar to ribosomal protein S27 (LOC652046), mRNA.					
Homo sapiens	RefSeq	NM_183353.1	ILMN_9050	RNF12	NM_016120.2	NM_016120.2		51132	34452683	NM_016120.2	RNF12	NP_057204.2	ILMN_1727789	0007040368	A	3129	GACAGTAATAATGCAGACACAAACTGGTTTCATATGGTGAGAGCAGCCAC	X	-	73726906-73726955	Xq13.2c	Homo sapiens ring finger protein 12 (RNF12), transcript variant 1, mRNA.	A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [pmid 11013082] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11013082] [evidence NAS]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 11013082] [evidence NAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC15161; NY-REN-43; RLIM	MGC15161; NY-REN-43; RLIM
Homo sapiens	RefSeq	XR_015463.1	ILMN_183915	LOC729141	XR_015463.1	XR_015463.1		729141	113413377	XR_015463.1	LOC729141		ILMN_3306628	0003840500	M	1124	GCATCCAGGATTCCTAGCAAGTGACAAAATATCTGCCGGCAATGCACCGC	2	+	188801044-188801093	2q32.1f	PREDICTED: Homo sapiens misc_RNA (LOC729141), miscRNA.					
Homo sapiens	RefSeq	NM_014176.1	ILMN_9573	UBE2T	NM_014176.2	NM_014176.2		29089	142369556	NM_014176.2	UBE2T	NP_054895.1	ILMN_1711470	0002480722	S	533	GCCAGCCTTCCTCAAGAATGCCAGACAGTGGACAGAGAAGCATGCAAGAC	1	-	200568772-200568821	1q32.1d	Homo sapiens ubiquitin-conjugating enzyme E2T (putative) (UBE2T), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	HSPC150; PIG50	PIG50; HSPC150
Homo sapiens	RefSeq	NM_003048.3	ILMN_25759	SLC9A2	NM_003048.3	NM_003048.3		6549	38569454	NM_003048.3	SLC9A2	NP_003039.2	ILMN_1738849	0003710563	S	5172	CAGCTTTTGCTCAGCTTTATGGTGGGGTGTACTGTTTTATCTGGGCGGTG	2	+	102693971-102694020	2q12.1a	Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 2 (SLC9A2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7683411] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [pmid 7683411] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NHE2	NHE2
Homo sapiens	RefSeq	XM_941789.1	ILMN_34966	LOC647169	XM_941789.2	XM_941789.2		647169	113418091	XM_941789.2	LOC647169	XP_946882.2	ILMN_1782937	0007210392	S	118	GGGATGAAGCTGGTGCAGACCAGAGCCATTCTCAACTACATTGTCAGCAA				6p12.1d	PREDICTED: Homo sapiens similar to glutathione S-transferase alpha 3 (LOC647169), mRNA.					
Homo sapiens	RefSeq	NM_004445.2	ILMN_27325	EPHB6	NM_004445.2	NM_004445.2		2051	56119211	NM_004445.2	EPHB6	NP_004436.1	ILMN_1802646	0007400017	S	3825	TGAGGCAGCAGGGCTCAGTGGAGGTCTGAGAATGACGATACCCGTGACTC	7	+	142278751-142278779:142278780-142278800	7q34f	Homo sapiens EPH receptor B6 (EPHB6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9207182] [evidence TAS]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [pmid 10984508] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC129910; MGC129911; HEP	MGC129910; MGC129911; HEP
Homo sapiens	Unigene	Hs.543151	ILMN_106807	HS.543151	Hs.543151		Hs.543151		3751514	AI198908			ILMN_1878265	0005670066	S	273	GGGTTTGGATCTAGGCTCTCAAAGGGGGTTCAGATGGCCAGGACCCAAGG	3	+	50554174-50554223		qf55c01.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1753920 3, mRNA sequence					
Homo sapiens	RefSeq	XM_930690.1	ILMN_172495	LOC727778	XM_001125727.1	XM_001125727.1		727778	113411800	XM_001125727.1	LOC727778	XP_001125727.1	ILMN_1762243	0000110241	A	1415	GTTTCCCGAGCTCGACAATCGGCTAGCCACTCCTGATAGCGTTCGGCGCT	1	+	126630-126679		PREDICTED: Homo sapiens similar to K07F5.15, transcript variant 2 (LOC727778), mRNA.					
Homo sapiens	Unigene	Hs.287989	ILMN_84869	HS.287989	Hs.287989		Hs.287989		11600201	BF515022			ILMN_1824566	0001230133	S	358	TGTCTGGGTCTTCACCCTCCAAAGGTAAGTCTGCTTGTCTGCTCATACCC	3	+	115526387-115526436		UI-H-BW1-anr-d-11-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3083204 3, mRNA sequence					
Homo sapiens	RefSeq	NM_152851.1	ILMN_1889	MS4A6A	NM_152851.1	NM_152851.1		64231	23238235	NM_152851.1	MS4A6A	NP_690590.1	ILMN_2359800	0001770152	A	383	GGGACTATCCAGATCTTGTGTGGCATGATGGTATTGAGCTTGGGGATCAT	11	-	59947391-59947438:59949054-59949055	11q12.1d-q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 6A (MS4A6A), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CDA01; MSTP090; MGC22650; 4SPAN3; 4SPAN3.2; MS4A6; CD20L3; MST090; MGC131944	CDA01; MSTP090; MGC22650; 4SPAN3; 4SPAN3.2; MS4A6; CD20L3; MST090; MGC131944
Homo sapiens	RefSeq	NM_152851.1	ILMN_1889	MS4A6A	NM_152851.1	NM_152851.1		64231	23238235	NM_152851.1	MS4A6A	NP_690590.1	ILMN_1721035	0000520360	A	692	CTCTCTGATGCTGATTTGCACTCTGCTGGAATTCTGCCTAGCTGTGCTCA	11	-	59940544-59940593	11q12.1d-q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 6A (MS4A6A), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CDA01; MSTP090; MGC22650; 4SPAN3; 4SPAN3.2; MS4A6; CD20L3; MST090; MGC131944	CDA01; MSTP090; MGC22650; 4SPAN3; 4SPAN3.2; MS4A6; CD20L3; MST090; MGC131944
Homo sapiens	Unigene	Hs.572752	ILMN_124933	HS.572752	Hs.572752		Hs.572752		2359834	AA582474			ILMN_1852224	0002260315	S	156	GGCAGTTCTGGTTTTGGAACTGATCCCAGAATTCTACCTTGCAGGCTAGG	9	-	107194839-107194888		nn54f09.s1 NCI_CGAP_Kid6 Homo sapiens cDNA clone IMAGE:1087721 3, mRNA sequence					
Homo sapiens	RefSeq	NM_153380.1	ILMN_2692	ZNF41	NM_153380.1	NM_153380.1		7592	23510454	NM_153380.1	ZNF41	NP_700359.1	ILMN_1789750	0002810274	I	12	CGGTAGGGACGGCCTGAGGCCGAGGGCACCCTGAGGGCGGAAGAGGCAAA	X	-	47227228-47227277	Xp11.3a	Homo sapiens zinc finger protein 41 (ZNF41), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MRX89; MGC8941	MRX89; MGC8941
Homo sapiens	RefSeq	NM_006398.2	ILMN_161963	UBD	NM_006398.2	NM_006398.2		10537	50355987	NM_006398.2	UBD	NP_006389.1	ILMN_1678841	0006420605	S	530	CCTCCTCCAGGTGCGAAGGTCCAGCTCAGTGGCACAAGTGAAAGCAATGA	6	-	29631778-29631827	6p22.1a	Homo sapiens ubiquitin D (UBD), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9368598] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9368598] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		UBD-3; FAT10	GABBR1; UBD-3; FAT10
Homo sapiens	RefSeq	XR_019265.1	ILMN_162991	LOC728698	XR_019265.1	XR_019265.1		728698	113423766	XR_019265.1	LOC728698		ILMN_3226012	0003060086	A	473	TGCAGACGAAGCTCCTCACATCATTGTGGGTACCCCTGGCCATGTGTTTG				12q13.13e	PREDICTED: Homo sapiens misc_RNA (LOC728698), miscRNA.					
Homo sapiens	Unigene	Hs.579513	ILMN_131694	HS.579513	Hs.579513		Hs.579513		27931283	CB105476			ILMN_1858820	0001470671	S	103	GGACCATGGACATCAGACACAGAGGCAGGGAGATAAGAAGCTGTGTGCAG	18	+	1645280-1645329		K-EST0130175 S13KMS5s1 Homo sapiens cDNA clone S13KMS5s1-28-F07 5, mRNA sequence					
Homo sapiens	RefSeq	NM_020149.2	ILMN_17528	MEIS2	NM_172315.1	NM_172315.1		4212	27502380	NM_172315.1	MEIS2	NP_758526.1	ILMN_1695945	0000020358	A	2132	TCGAACTCCAGCTTCAAGAATGTGTTTTCATGCCCGGCCTTTGTTCCTCC	15	-	37183813-37183862	15q14c	Homo sapiens Meis homeobox 2 (MEIS2), transcript variant g, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10764806] [evidence TAS]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10764806] [evidence NAS]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 10764806] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10764806] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 17178831] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC2820; MRG1; HsT18361	MGC2820; MRG1; HsT18361
Homo sapiens	RefSeq	XM_929868.1	ILMN_38247	LOC646906	XM_929868.1	XM_929868.1		646906	89052487	XM_929868.1	LOC646906	XP_934961.1	ILMN_1662370	0001820753	S	61	AATCAGGCACGCAGCTGGAGCGAACAGGGCGGCTTCCGGGATTTGGCGGG	19	+	23889472-23889521		PREDICTED: Homo sapiens similar to Zinc finger protein 254 (Bone marrow zinc finger 5) (BMZF-5) (Hematopoietic cell derived zinc finger protein 1) (HD-ZNF1) (LOC646906), mRNA.					
Homo sapiens	RefSeq	XM_936308.1	ILMN_30570	LOC642156	XM_936308.1	XM_936308.1		642156	88950396	XM_936308.1	LOC642156	XP_941401.1	ILMN_1671320	0002450497	S	181	ACAGCAGAGGCTCATCTACAGTGGCAAACATGAATGATGAGAAGACAGCA					PREDICTED: Homo sapiens hypothetical protein LOC642156 (LOC642156), mRNA.					
Homo sapiens	RefSeq	XM_927862.1	ILMN_43438	LOC644766	XM_927862.1	XM_927862.1		644766	89038301	XM_927862.1	LOC644766	XP_932955.1	ILMN_1686883	0001340605	S	1	ATGCCACCTCCTTTCTTCTTCATTTGAGTTAAATTTATCTAGTTATTATT	15	-	37363510-37363559		PREDICTED: Homo sapiens hypothetical protein LOC644766 (LOC644766), mRNA.					
Homo sapiens	Unigene	Hs.150747	ILMN_78985	HS.150747	Hs.150747		Hs.150747		27826009	BX089654			ILMN_1865559	0001410670	S	49	CAAGGTGACAAGAAAGTCATCTGCAGCTGTTTATGGACAAGAATTTGGGG	5	+	54068310-54068359		BX089654 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGp998I094291 ; IMAGE:1690064, mRNA sequence					
Homo sapiens	RefSeq	NM_002825.5	ILMN_13278	PTN	NM_002825.5	NM_002825.5		5764	42476152	NM_002825.5	PTN	NP_002816.1	ILMN_1813753	0004390328	S	1355	TGTAGTCAGCAAAATGGGGGTGGGGAAGCAGAGCATGTCCTAGTTCAATG	7	-	136912232-136912281	7q33d	Homo sapiens pleiotrophin (PTN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10706604] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [pmid 10706604] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 2270483] [evidence TAS]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 2270483] [evidence TAS]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [pmid 10706604] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	HBGF8; NEGF1; HBNF; HARP	HBGF8; NEGF1; HBNF; HARP
Homo sapiens	RefSeq	NM_015884.1	ILMN_10839	MBTPS2	NM_015884.1	NM_015884.1		51360	7706692	NM_015884.1	MBTPS2	NP_056968.1	ILMN_1798311	0004850739	S	1614	GGCTGCCAATGTGACCCTGGGACTCTGGATGGTTACAGCACGGTAATGTT	X	+	21810649-21810694:21810695-21810698	Xp22.12a-p22.11b	Homo sapiens membrane-bound transcription factor peptidase, site 2 (MBTPS2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9659902] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 9659902] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 9659902] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]	S2P	S2P
Homo sapiens	RefSeq	NM_015565.1	ILMN_167204	RNF160	NM_015565.1	NM_015565.1		26046	31657110	NM_015565.1	RNF160	NP_056380.1	ILMN_2077504	0006270278	S	7290	CCACATCTGTACAGCGTTGACAACTCTAACTAAAAGGATTACAGCCCTTA	21	-	29222700-29222749	21q21.3c	Homo sapiens ring finger protein 160 (RNF160), mRNA.				FLJ11053; RNF160; C21orf10; KIAA0714; C21orf98	FLJ11053; RNF160; C21orf10; KIAA0714; C21orf98
Homo sapiens	RefSeq	XM_001715368.1	ILMN_344544	LOC100132605	XM_001715368.1	XM_001715368.1		100132605	169167577	XM_001715368.1	LOC100132605	XP_001715420.1	ILMN_3243283	0003420707	S	1134	TGCAGAGTCAGGCGCCAGTTGCTTCAGCCACAGTCCTGAGGGAGGTGCAG	5	+	728023-728072	5p15.33e	PREDICTED: Homo sapiens hypothetical protein LOC100132605 (LOC100132605), mRNA.					
Homo sapiens	RefSeq	NM_138395.2	ILMN_181876	MARS2	NM_138395.2	NM_138395.2		92935	56550036	NM_138395.2	MARS2	NP_612404.1	ILMN_2136423	0004760327	S	2556	GGGATAGCTTTGCAACCACTATTGTTTTAATGGAAAGCAAAAAACCCCCC	2	+	198280887-198280936	2q33.1b	Homo sapiens methionyl-tRNA synthetase 2, mitochondrial (MARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 15274629] [evidence IDA]	The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6431] [pmid 15274629] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met) [goid 4825] [pmid 15274629] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	mtMetRS; MetRS	mtMetRS; MetRS
Homo sapiens	RefSeq	XM_933784.1	ILMN_44826	LOC646631	XM_933784.1	XM_933784.1		646631	89037455	XM_933784.1	LOC646631	XP_938877.1	ILMN_1714218	0002900133	S	305	ACATGGTCCTGCATGTGCGACTTGGGAGGCGACGTGACCAGCTCCACCAA	14	+	73295363-73295412		PREDICTED: Homo sapiens hypothetical protein LOC646631 (LOC646631), mRNA.					
Homo sapiens	RefSeq	XM_373908.4	ILMN_39285	LOC388789	XM_939954.2	XM_939954.2		388789	113428986	XM_939954.2	LOC388789	XP_945047.2	ILMN_1803953	0000650605	A	219	GGCGAAGTCGTCAGACCAAAAGGATGGCTCAGCAAGTGAAGTACCCAGTG				20p11.23d	PREDICTED: Homo sapiens hypothetical gene supported by AF147354 (LOC388789), mRNA.					
Homo sapiens	RefSeq	NM_001350.3	ILMN_19278	DAXX	NM_001350.3	NM_001350.3		1616	53828721	NM_001350.3	DAXX	NP_001341.1	ILMN_1708077	0003060722	S	2130	CCTTGGCTTCCTTGGCCCCAGTTGCTGATTCCTCCACGAGGGTGGACTCT	6	-	33394850-33394899	6p21.32a	Homo sapiens death-domain associated protein (DAXX), mRNA.	A compact and highly condensed form of chromatin [goid 792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10698492] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15572661] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15572661] [evidence TAS]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 10669754] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IEA]; A compact and highly condensed form of chromatin [goid 792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IEA]; A compact and highly condensed form of chromatin [goid 792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [evidence IEA]	A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 15572661] [evidence TAS]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 9215629] [evidence TAS];  [goid 8625] [pmid 9215629] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10698492] [evidence IDA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 15572661] [evidence IDA]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence IEA]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence IEA]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence IEA]	 [goid 5057] [pmid 9215629] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10698492] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [pmid 15572661] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 10698492] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10698492] [evidence IDA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 15572661] [evidence IPI]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]	MGC126246; BING2; MGC126245; DAP6	MGC126246; BING2; MGC126245; DAP6
Homo sapiens	RefSeq	NM_206893.1	ILMN_11273	MS4A10	NM_206893.2	NM_206893.2		341116	141802757	NM_206893.2	MS4A10	NP_996776.1	ILMN_1794921	0000160066	S	2155	GGCTAGCTCTGCCAATCACTTACTGTGCGGGTTTGACTCAGTCCCTTCCC	11	+	60325213-60325262	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 10 (MS4A10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MS4A9; FLJ16054; CD20L7	FLJ16054; CD20L7; MS4A9
Homo sapiens	RefSeq	NM_002229.2	ILMN_27927	JUNB	NM_002229.2	NM_002229.2		3726	44921611	NM_002229.2	JUNB	NP_002220.1	ILMN_2086077	0007550500	S	1276	AACGGCTGTCAGCTGCTGCTTGGGGTCAAGGGACACGCCTTCTGAACGTC	19	+	12764585-12764629:12764630-12764634	19p13.13c	Homo sapiens jun B proto-oncogene (JUNB), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 2513129] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 2513129] [evidence TAS]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 2513129] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2513129] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 2513129] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]		
Homo sapiens	RefSeq	XM_925901.1	ILMN_30723	LOC642369	XM_925901.1	XM_925901.1		642369	89033733	XM_925901.1	LOC642369	XP_930994.1	ILMN_1673397	0006660519	S	1221	GCAGCTGGCGTTCAGGCCTGCTCAGGCGTCTCATGACCTTCACTGTACTT	11	+	312614-312663		PREDICTED: Homo sapiens hypothetical protein LOC642369 (LOC642369), mRNA.					
Homo sapiens	RefSeq	NM_001032280.1	ILMN_176394	TFAP2A	NM_001042425.1	NM_001042425.1		7020	109389357	NM_001042425.1	TFAP2A	NP_001035890.1	ILMN_1765574	0001570646	I	1690	GAACAGGCCGTGAAGCCAGCAGAGAAAAGTTCTGCCAAGTTTGTGAACCC	6	-	10506312-10506361	6p24.3a	Homo sapiens transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) (TFAP2A), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12586840] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8321221] [evidence TAS]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [pmid 8661133] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1916817] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 8321221] [evidence TAS]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [pmid 12072434] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	TFAP2; AP-2; AP2TF; AP-2alpha	TFAP2; AP-2; AP2TF; AP-2alpha
Homo sapiens	RefSeq	XM_940439.1	ILMN_43420	LOC402679	XM_940439.1	XM_940439.1		402679	89026240	XM_940439.1	LOC402679	XP_945532.1	ILMN_1801032	0001740524	A	624	GCCTATTCCCCCACCCACAACCAGAAGCAGTGGTAGTGCCCCAGATGGAA				7q21.3c	PREDICTED: Homo sapiens similar to Serine/threonine-protein kinase MARK2 (MAP/microtubule affinity-regulating kinase 2) (ELKL motif kinase) (EMK1) (PAR1 homolog) (LOC402679), mRNA.					
Homo sapiens	RefSeq	NM_031457.1	ILMN_11936	MS4A8B	NM_031457.1	NM_031457.1		83661	13899294	NM_031457.1	MS4A8B	NP_113645.1	ILMN_1808249	0000580243	S	1007	CCCTTTCTGGGCTTCCATAACCCAGGTCGTTCCTGTTCTGACAGCTGAGG	11	+	60239514-60239563	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 8B (MS4A8B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	4SPAN4; MS4A4	4SPAN4; MS4A4
Homo sapiens	RefSeq	NM_207377.1	ILMN_15353	UNQ9438	NM_207377.1	NM_207377.1		387990	46409383	NM_207377.1	UNQ9438	NP_997260.1	ILMN_1669296	0004780382	S	194	GCCTCAAAAGGCTGAGGAGCAGGGCACGCAGTTGTGGGATCCAACGAAGA	14	+	57932782-57932812:57939151-57939169	14q23.1b	Homo sapiens TIMM9 (UNQ9438), mRNA.					
Homo sapiens	RefSeq	XM_945688.1	ILMN_137752	LOC650677	XM_945688.1	XM_945688.1		650677	89037211	XM_945688.1	LOC650677	XP_950781.1	ILMN_1698407	0005810066	I	684	GCCTGCCCAGCCCCGGAGCCACCACTTCTGCCCCACAACCCTGCCTCTCG					PREDICTED: Homo sapiens hypothetical protein LOC650676, transcript variant 2 (LOC650677), mRNA.					
Homo sapiens	RefSeq	XM_941484.1	ILMN_33974	LOC442015	XM_941484.1	XM_941484.1		442015	88955075	XM_941484.1	LOC442015	XP_946577.1	ILMN_1653506	0000160327	A	112	ATCGCCGGTCCGCGGGAGCCTTCGGTCTTCTTGTCTGTGACCTACTACTT					PREDICTED: Homo sapiens similar to Ferritin heavy chain (Ferritin H subunit) (Proliferation-inducing gene 15 protein) (LOC442015), mRNA.					
Homo sapiens	RefSeq	NM_014748.2	ILMN_175924	SNX17	NM_014748.2	NM_014748.2		9784	23238249	NM_014748.2	SNX17	NP_055563.1	ILMN_1732810	0003360468	S	1810	GCACAGAGGATTGCCCCTTCTCTTTTCAGAGCTGGCCCTCGATGCCAAAT	2	+	27453265-27453314	2p23.3a	Homo sapiens sorting nexin 17 (SNX17), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 12169628] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10942595] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 12169628] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [pmid 12169628] [evidence IC ]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 12169628] [evidence NAS]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [pmid 12169628] [evidence NAS]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [pmid 12169628] [evidence NAS]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11237770] [evidence IPI]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [pmid 12169628] [evidence IDA]	KIAA0064	KIAA0064
Homo sapiens	RefSeq	NM_178835.2	ILMN_183458	ZNF827	NM_178835.3	NM_178835.3		152485	116256474	NM_178835.3	ZNF827	NP_849157.2	ILMN_1727574	0001300500	S	4068	TCCCAGCATCCCCTCACCCAAACACTCCTTCCTGGCCTATCTCGGACTGA	4	-	146901403-146901452	4q31.22b	Homo sapiens zinc finger protein 827 (ZNF827), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	Unigene	Hs.577545	ILMN_129726	HS.577545	Hs.577545		Hs.577545		6567465	AW235076			ILMN_1887063	0006200288	S	109	GACAACACCACAGACCCCTTTATGCAATCACCCAAGGTTCCAAGGACCCC	12	+	68626698-68626747		xn18c11.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2694068 3, mRNA sequence					
Homo sapiens	Unigene	Hs.531457	ILMN_101614	HS.531457	Hs.531457		Hs.531457		21754076	AK094914			ILMN_1882590	0003400709	S	3383	CGACCGGCTCGTATTCCGATCAGTCGCTTCCATTGTTAGCATCGTACACG	9	-	138038805-138038854		Homo sapiens cDNA FLJ37595 fis, clone BRCOC2007864					
Homo sapiens	RefSeq	NM_032499.3	ILMN_18248	C15ORF41	NM_032499.3	NM_032499.3		84529	40254989	NM_032499.3	C15orf41	NP_115888.1	ILMN_1747217	0000270017	S	2201	GCCTGCTGCTTTTCCTTTTGAAGGACACAAACCTGGTCCCAACATGTGTG	15	+	34889347-34889396	15q14c	Homo sapiens chromosome 15 open reading frame 41 (C15orf41), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC11326; FLJ22851; HH114	MGC11326; FLJ22851; HH114
Homo sapiens	RefSeq	NM_178231.2	ILMN_947	ICA1L	NM_178231.2	NM_178231.2		130026	118572579	NM_178231.2	ICA1L	NP_839945.1	ILMN_2290877	0001230253	I	848	CAGTTACCTGTTCTCAAAGGCCCCAGTATTCTCTCTTCTTTCCTCAGTTA	2	-	203690241-203690290	2q33.1g	Homo sapiens islet cell autoantigen 1,69kDa-like (ICA1L), transcript variant 2, mRNA.				DKFZp434E1919; ALS2CR14; MGC138440; ALS2CR15	
Homo sapiens	RefSeq	NM_178231.2	ILMN_947	ICA1L	NM_178231.2	NM_178231.2		130026	118572579	NM_178231.2	ICA1L	NP_839945.1	ILMN_2400854	0003610059	A	600	GGATGAGCACTTGGTGGCGTCTGATGCTGAACTGGATGCTAAACTTGAGG	2	-	203690489-203690490:203693571-203693618	2q33.1g	Homo sapiens islet cell autoantigen 1,69kDa-like (ICA1L), transcript variant 2, mRNA.				DKFZp434E1919; ALS2CR14; MGC138440; ALS2CR15	
Homo sapiens	RefSeq	NM_001012415.1	ILMN_14278	SOHLH1	NM_001012415.1	NM_001012415.1		402381	60302675	NM_001012415.1	SOHLH1	NP_001012415.1	ILMN_1656383	0001240543	S	1744	CTGGCCCTGAAGGACGAGGTGGAGAGCATCTTCCCTGACTTCTTTGCCTG	9	-	137725267-137725316	9q34.3c	Homo sapiens spermatogenesis and oogenesis specific basic helix-loop-helix 1 (SOHLH1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	bA100C15.3; C9orf157; NOHLH; TEB2	bA100C15.3; C9orf157; NOHLH; TEB2
Homo sapiens	RefSeq	XM_001717669.1	ILMN_338751	LOC100130884	XM_001717669.1	XM_001717669.1		100130884	169209544	XM_001717669.1	LOC100130884	XP_001717721.1	ILMN_3257335	0005870047	M	336	AGCCGCTGGAGGTCCCGCTGGTTCCCCAAATGGCTTCTGTCCTGAGCCGT				16q24.2b	PREDICTED: Homo sapiens hypothetical LOC100130884 (LOC100130884), mRNA.					
Homo sapiens	RefSeq	NM_052862.2	ILMN_29038	RCSD1	NM_052862.2	NM_052862.2		92241	31377636	NM_052862.2	RCSD1	NP_443094.2	ILMN_1749006	0001170703	S	2692	TGCAAGGGACAGGGGGCCTGACTACCCAGTCTTTGACTTGTATCCTCTCC	1	+	165941667-165941716	1q24.2a	Homo sapiens RCSD domain containing 1 (RCSD1), mRNA.				RP3-503M14.1; MGC21854; CAPZIP; MGC126611; MK2S4; MGC126585	RP3-503M14.1; MGC21854; CAPZIP; MGC126611; MK2S4; MGC126585
Homo sapiens	RefSeq	NM_006819.1	ILMN_28761	STIP1	NM_006819.1	NM_006819.1		10963	5803180	NM_006819.1	STIP1	NP_006810.1	ILMN_1789510	0000620711	S	1827	GAAGACACAGAGACTCGTACCTGCGCTGTTTGTGCCGCCGCTGCCTCTGG	11	+	63728307-63728356	11q13.1a	Homo sapiens stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) (STIP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16130169] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 1569099] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 1569099] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	HOP; STI1L; IEF-SSP-3521; P60	HOP; STI1L; IEF-SSP-3521; P60
Homo sapiens	RefSeq	XM_939263.1	ILMN_30588	LOC650180	XM_939263.1	XM_939263.1		650180	89030465	XM_939263.1	LOC650180	XP_944356.1	ILMN_1658825	0003140189	S	509	TAGGGTCCAAAAATCTCAGGACATCTTTAGTGTCTCCACTCCTAACCTTC					PREDICTED: Homo sapiens similar to chromosome 9 open reading frame 36 (LOC650180), mRNA.					
Homo sapiens	RefSeq	NM_002969.3	ILMN_25203	MAPK12	NM_002969.3	NM_002969.3		6300	48255969	NM_002969.3	MAPK12	NP_002960.2	ILMN_1797786	0000450082	S	1432	TCATGGAGGAGCACCTGAACTTTCTGGACAAGACCTCTGGCCGACCTGGG	22	-	50691603-50691652	22q13.33b	Homo sapiens mitogen-activated protein kinase 12 (MAPK12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The widespread phosphorylation of various molecules, triggering many downstream processes, that occurs in response to the detection of DNA damage [goid 6975] [pmid 10848581] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10848581] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9297626] [evidence EXP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8633070] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [pmid 8633070] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 10508788] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8633070] [evidence IDA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 10848581] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15158451] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ERK6; PRKM12; SAPK3; P38GAMMA; ERK3; SAPK-3	ERK6; PRKM12; SAPK3; P38GAMMA; ERK3; SAPK-3
Homo sapiens	RefSeq	NM_001136273.1	ILMN_370131	ZFP92	NM_001136273.1	NM_001136273.1		139735	210147474	NM_001136273.1	ZFP92	NP_001129745.1	ILMN_3236736	0006900670	S	1022	TGCACAGCGGTGAGAAGCCCTACGAGTGCAGCGACTGCGGCAAGGCCTTC	X	+	152686857-152686906	Xq28f	Homo sapiens zinc finger protein 92 homolog (mouse) (ZFP92), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_182765.1	ILMN_459	HECTD2	NM_182765.2	NM_182765.2		143279	144446226	NM_182765.2	HECTD2	NP_877497.1	ILMN_1668876	0000610176	I	3823	CTTGCTATGCTTCCTGCACCCAACCAGCAGAATTCTTCCAGGGTGGAGGA	10	+	93263519-93263568	10q23.32a	Homo sapiens HECT domain containing 2 (HECTD2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	FLJ16050	
Homo sapiens	RefSeq	NM_173497.1	ILMN_459	HECTD2	NM_182765.2	NM_182765.2		143279	144446226	NM_182765.2	HECTD2	NP_877497.1	ILMN_1790530	0004890142	A	442	GGCCCCAGTCCTTCCAGAACCTATTCTTCCTATCCAGCCCAAAACTGTGA	10	+	93210243-93210292	10q23.32a	Homo sapiens HECT domain containing 2 (HECTD2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	FLJ16050	FLJ16050
Homo sapiens	RefSeq	XM_370582.4	ILMN_37925	C10ORF122	XM_370582.4	XM_370582.4		387718	89031653	XM_370582.4	C10orf122	XP_370582.2	ILMN_1758153	0007150482	A	327	GCATGACAATCGGCACAGCTTGGAGAACTCTGGATGCTACCTTGACTCCG	10	-	127255432-127255433:127339580-127339627		PREDICTED: Homo sapiens chromosome 10 open reading frame 122, transcript variant 1 (C10orf122), mRNA.					
Homo sapiens	RefSeq	XR_015443.2	ILMN_164591	LOC729081	XR_015443.2	XR_015443.2		729081	169201374	XR_015443.2	LOC729081		ILMN_3299383	0007380017	M	309	CAAAAATTGGAAGGAGGACGGGGGCAGTTCTTCTGCCTCTCAGCCAGAGG				10q24.33a	PREDICTED: Homo sapiens misc_RNA (LOC729081), miscRNA.					
Homo sapiens	RefSeq	NM_006261.2	ILMN_10623	PROP1	NM_006261.2	NM_006261.2		5626	40254838	NM_006261.2	PROP1	NP_006252.1	ILMN_1730492	0001070615	S	1163	GTGGAGGAAGTCTGGGGAGGTGAGCTACTGGAAGAGACAGGGCAAGATGC	5	-	177352093-177352142	5q35.3b	Homo sapiens PROP paired-like homeobox 1 (PROP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9462743] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The differentiation of cells that will contribute to the structure and function of the hypothalamus [goid 21979] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whose specific outcome is the progression of a gland over time, from its formation to the mature structure. A gland is an organ specialised for secretion [goid 48732] [evidence IEA]; The process by which the anatomical structures of the hypophysis are generated and organized. Morphogenesis pertains to the creation of form. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 48850] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IEA]; The process whereby a relatively unspecialized cell, acquires specialized structural and/or functional features of a somatotropin secreting cell. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60126] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9462743] [evidence TAS]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_152222.1	ILMN_28791	RELT	NM_152222.1	NM_152222.1		84957	23238199	NM_152222.1	RELT	NP_689408.1	ILMN_1766830	0004880368	I	6	TGCGCACCTTCCCGGCCCAGCCGGCGATTCATTCAAAAGGCGCGCAGGCT	11	+	72765058-72765107	11q13.4b	Homo sapiens RELT tumor necrosis factor receptor (RELT), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ14993; TNFRSF19L; RELT	TNFRSF19L; FLJ14993; RELT
Homo sapiens	RefSeq	NM_032871.3	ILMN_28791	RELT	NM_152222.1	NM_152222.1		84957	23238199	NM_152222.1	RELT	NP_689408.1	ILMN_1748614	0005560520	A	3120	GGGAGGTAATTGGGGGTGAGGAAGATGTGCGGGCCAGGGAATGTGTTCCA	11	+	72785846-72785895	11q13.4b	Homo sapiens RELT tumor necrosis factor receptor (RELT), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ14993; TNFRSF19L; RELT	TNFRSF19L; FLJ14993; RELT
Homo sapiens	RefSeq	NM_012146.1	ILMN_14075	DUX1	NM_012146.1	NM_012146.1		26584	11120735	NM_012146.1	DUX1	NP_036278.1	ILMN_1711055	0001440307	S	867	TAGGTGGCATCCACACAAGGGCAAAATCCGGAAGGACTGGGACGCGCAGC	10	+	135341134-135341183	10q26.3f	Homo sapiens double homeobox, 1 (DUX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9736770] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9736770] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_005368.2	ILMN_5316	MB	NM_005368.2	NM_005368.2		4151	44955876	NM_005368.2	MB	NP_005359.1	ILMN_1666109	0004920561	A	750	CTGGGAACCGGGAGTGGCCCTTGGCTCACTGTGTTCTGCATGGTTTGGAT	22	-	36003089-36003138	22q12.3c	Homo sapiens myoglobin (MB), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]	Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC13548; PVALB	MGC13548; PVALB
Homo sapiens	RefSeq	NM_005368.2	ILMN_5316	MB	NM_005368.2	NM_005368.2		4151	44955876	NM_005368.2	MB	NP_005359.1	ILMN_2364864	0002600019	A	577	GCCCCGGGTTCAAGAGAGAGCGGGGTCTGATCTCGTGTAGCCATATAGAG	22	-	36003262-36003311	22q12.3c	Homo sapiens myoglobin (MB), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte without a nucleus, as found in mammals [goid 43353] [evidence IEA]	Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC13548; PVALB	MGC13548; PVALB
Homo sapiens	RefSeq	XM_498329.2	ILMN_38754	LOC442423	XM_498329.2	XM_498329.2		442423	89029578	XM_498329.2	LOC442423	XP_498329.2	ILMN_1705577	0001470193	S	94	GCCCCCGTGGCTTTTTGCCCCATGGCCATCCTCAGAAGCGCTGGCCACAC	9	-	69067811-69067822:69075063-69075100	9q12j	PREDICTED: Homo sapiens similar to Ig kappa chain V-I region HK101 precursor (LOC442423), mRNA.					
Homo sapiens	Unigene	Hs.211930	ILMN_82275	HS.211930	Hs.211930		Hs.211930		51467278	XM_374307			ILMN_1851299	0006840367	S	387	TGACCTGCCCTCTCCAGGGGGGACCTGCACTTTCTGCCACCAAAGAGGAT					PREDICTED: Homo sapiens hypothetical LOC389801 (LOC389801), mRNA					
Homo sapiens	RefSeq	NM_052906.1	ILMN_173918	ELFN2	NM_052906.3	NM_052906.3		114794	146149115	NM_052906.3	ELFN2	NP_443138.2	ILMN_1658685	0004050524	S	8052	AGTCCCCAAGTTGGCTGTGGTTGGGCACCTGGTTTGGGTCCTGCAGAGCT	22	-	37764259-37764308	22q13.1a	Homo sapiens extracellular leucine-rich repeat and fibronectin type III domain containing 2 (ELFN2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LRRC62; dJ63G5.3; KIAA1904	dJ63G5.3
Homo sapiens	RefSeq	NR_024275.1	ILMN_370318	LOC151162	NR_024275.1	NR_024275.1		151162	210033072	NR_024275.1	LOC151162		ILMN_3238058	0001440437	S	5112	TCTGCAAACAAGGTGTCGCCGTCCAAATGTACTGTCCTGGCATAGAGAGC	2	+	135212071-135212120		Homo sapiens hypothetical LOC151162 (LOC151162), non-coding RNA.					
Homo sapiens	RefSeq	NM_080832.1	ILMN_15439	PABPC5	NM_080832.1	NM_080832.1		140886	18201887	NM_080832.1	PABPC5	NP_543022.1	ILMN_1796926	0006590753	A	1611	TTCAGCCTTAGTTGGTGCCTCCTTAGTTTGGGCTCCTTTGTGATAAGGGG	X	+	90578403-90578452	Xq21.31d	Homo sapiens poly(A) binding protein, cytoplasmic 5 (PABPC5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	PABP5	PABP5
Homo sapiens	RefSeq	XM_933297.1	ILMN_37827	LOC645956	XM_933297.1	XM_933297.1		645956	89059851	XM_933297.1	LOC645956	XP_938390.1	ILMN_1726080	0000430047	S	292	CAGGGGAGGATACCGGGCACTCGGAATCTGAGACCACCGGAGCCACAGAC	X	+	72075214-72075216:72075371-72075398:72075399-72075417		PREDICTED: Homo sapiens hypothetical protein LOC645956 (LOC645956), mRNA.					
Homo sapiens	RefSeq	NM_031864.1	ILMN_19729	PCDHA12	NM_031864.1	NM_031864.1		56137	14165391	NM_031864.1	PCDHA12	NP_114070.1	ILMN_2338687	0000380577	A	2113	GGCCACGGTGCTGGTGTCGCTGGTGGAGAACGGCCAGGCCCCAAAGACGT	5	+	140237227-140237276	5q31.3b	Homo sapiens protocadherin alpha 12 (PCDHA12), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-ALPHA12; MGC141932; MGC138485	MGC138485; PCDH-ALPHA12; MGC141932
Homo sapiens	RefSeq	NM_152425.1	ILMN_165297	CXORF55	XR_017698.1	XR_017698.1		139804	113430020	XR_017698.1	CXorf55		ILMN_1686637	0001780347	S	2003	AGCTTGCCTGACGCCTACAGCGGCGACCACGACAGATCCAGCAACAGTTA	X	+	114333225-114333274	Xq23d	PREDICTED: Homo sapiens chromosome X open reading frame 55 (CXorf55), misc RNA.					FLJ40249
Homo sapiens	RefSeq	NM_198187.2	ILMN_165647	ASTN2	NM_198187.2	NM_198187.2		23245	46488918	NM_198187.2	ASTN2	NP_937830.2	ILMN_2381559	0004010358	A	4040	CCTCAAGGACACCAAAATCACGTGTGAGGAGAAGATGGTGTCAATGGCCC	9	-	119216647-119216696	9q33.1b	Homo sapiens astrotactin 2 (ASTN2), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA0634; bA67K19.1	KIAA0634; bA67K19.1
Homo sapiens	RefSeq	NM_024941.1	ILMN_308292	C5ORF44	NM_001093756.1	NM_001093756.1		80006	148277003	NM_001093756.1	C5orf44	NP_001087225.1	ILMN_1726930	0005290192	S	2160	CAGCTGGGCAGATTTGGCCTGCAGGGTATAGTTGGCTGACCTCAATCTAG	5	+	64960656-64960705	5q12.3b	Homo sapiens chromosome 5 open reading frame 44 (C5orf44), transcript variant 3, mRNA.				MGC48585; FLJ26957	MGC48585
Homo sapiens	RefSeq	NM_001034832.2	ILMN_9301	SSX4B	NM_001034832.2	NM_001034832.2		548313	94983917	NM_001034832.2	SSX4B	NP_001030004.1	ILMN_2291709	0002680551	I	394	GCCCAAGAAGCCAGCAGAGGAAGAAAATGGTTTGAAGGAAGTGCCAGAGG	X	-	48265466-48265515	Xp11.23d	Homo sapiens synovial sarcoma, X breakpoint 4B (SSX4B), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_001034832.2	ILMN_9301	SSX4B	NM_001034832.2	NM_001034832.2		548313	94983917	NM_001034832.2	SSX4B	NP_001030004.1	ILMN_2402303	0005130615	A	644	CACATGCCCATGATGAGAAGCAGAACGTGGTGACCTTTCACGAACATGGG	X	-	48262047-48262096	Xp11.23d	Homo sapiens synovial sarcoma, X breakpoint 4B (SSX4B), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	XM_928848.1	ILMN_34303	LOC645868	XM_928848.1	XM_928848.1		645868	88953646	XM_928848.1	LOC645868	XP_933941.1	ILMN_1657711	0004670379	S	181	GACAAAGCATCTGCTGATCACAAAGCAGGAGAGAAATTCATTGATGAGTT	2	+	119396287-119396336		PREDICTED: Homo sapiens similar to Jerky protein (LOC645868), mRNA.					
Homo sapiens	RefSeq	NM_000606.1	ILMN_1016	C8G	NM_000606.1	NM_000606.1		733	4557392	NM_000606.1	C8G	NP_000597.1	ILMN_1737242	0002000072	S	571	GGAGGCCCACCTGACTGAGGACCAGATCTTCTACTTCCCCAAGTACGGCT	9	+	138960794-138960839:138960924-138960927	9q34.3e	Homo sapiens complement component 8, gamma polypeptide (C8G), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3052276] [evidence EXP]; A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow [goid 5579] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [pmid 8172891] [evidence TAS]; Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]	C8C; MGC142186	C8C; MGC142186
Homo sapiens	Unigene	Hs.578774	ILMN_130955	HS.578774	Hs.578774		Hs.578774		13964713	BG697942			ILMN_1882652	0001050674	S	714	CTGCAGCATCGCCACCTTGCAGTTAGTCACTGGAGTCCTCTCAGAATAGG					602661376F1 NCI_CGAP_Skn3 Homo sapiens cDNA clone IMAGE:4804290 5, mRNA sequence					
Homo sapiens	RefSeq	NM_000204.1	ILMN_12221	CFI	NM_000204.2	NM_000204.2		3426	119392080	NM_000204.2	CFI	NP_000195.2	ILMN_1727815	0001690609	S	1783	GGAGGCCCCTTAGTCTGTATGGATGCCAACAATGTGACTTATGTCTGGGG	4	-	110881624-110881673	4q25c	Homo sapiens complement factor I (CFI), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 8604219] [evidence TAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2956252] [evidence TAS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	IF; KAF; FI; factor I; C3b-INA	IF; KAF; FI; factor I; C3b-INA
Homo sapiens	RefSeq	NM_153221.1	ILMN_23797	CILP2	NM_153221.2	NM_153221.2		148113	145699138	NM_153221.2	CILP2	NP_694953.2	ILMN_1684468	0004230722	S	3327	TTGATGGTTCCTCTGACGGCTTCTCCAGAGAGATGAAGGCTGATGCCGGC	19	+	19517596-19517645	19p13.11a	Homo sapiens cartilage intermediate layer protein 2 (CILP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum [goid 4035] [pmid 12746903] [evidence IDA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [pmid 12746903] [evidence IDA]	CLIP-2; MGC45771	CLIP-2; MGC45771
Homo sapiens	RefSeq	NM_198526.1	ILMN_23540	ZNF710	NM_198526.1	NM_198526.1		374655	42734394	NM_198526.1	ZNF710	NP_940928.1	ILMN_1788700	0007380280	S	2845	CCACTAGGAACAAAGCCAGGACAGGCCCCGCGTCAGGCACACACTAACAA	15	+	88424792-88424841	15q26.1b	Homo sapiens zinc finger protein 710 (ZNF710), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ00306; DKFZp547K1113; FLJ37393; MGC163413	FLJ00306; DKFZp547K1113; MGC163413; FLJ37393
Homo sapiens	RefSeq	NM_003347.2	ILMN_9533	UBE2L3	NM_198157.1	NM_198157.1		7332	38157975	NM_198157.1	UBE2L3	NP_937800.1	ILMN_1677877	0001230242	A	2881	TTCACACCCGCCTGGTTTCTTGAAGTGTGCTGGGTCCTTCCCTCTGCTCC	22	+	20308188-20308237	22q11.21f	Homo sapiens ubiquitin-conjugating enzyme E2L 3 (UBE2L3), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 8563171] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8672131] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8563171] [evidence TAS]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 8576257] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 8563171] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 8563171] [evidence TAS]	L-UBC; UBCH7; E2-F1; UbcM4	L-UBC; UBCH7; E2-F1; UbcM4
Homo sapiens	RefSeq	NM_198157.1	ILMN_9533	UBE2L3	NM_198157.1	NM_198157.1		7332	38157975	NM_198157.1	UBE2L3	NP_937800.1	ILMN_1796830	0007560661	I	396	GCGTTCCCAATTATGGCTTCTCTCAGATCCAGCCTTGAAGTTCTTTGACC	22	+	20298854-20298901:20298902-20298903	22q11.21f	Homo sapiens ubiquitin-conjugating enzyme E2L 3 (UBE2L3), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 8563171] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8672131] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8563171] [evidence TAS]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 8576257] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 8563171] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 8563171] [evidence TAS]	L-UBC; UBCH7; E2-F1; UbcM4	L-UBC; UBCH7; E2-F1; UbcM4
Homo sapiens	Unigene	Hs.540022	ILMN_104905	HS.540022	Hs.540022		Hs.540022		13747572	BG221551			ILMN_1851891	0001990634	S	415	GCTGGCAGGCAGTGTTGGTATATGTGAGGAAATCAGTTTGCCCCCTCCGG	14	-	46023353-46023402		RST41364 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_002811.3	ILMN_23738	PSMD7	NM_002811.3	NM_002811.3		5713	34335279	NM_002811.3	PSMD7	NP_002802.2	ILMN_1776173	0006290021	S	1225	GCTCTCTGCCTCCGGTCACTCTTGCTGTGGTGCTACGTGGAAGTGAATGG	16	+	72897250-72897299	16q22.3c	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 (PSMD7), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [pmid 7755639] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	P40; S12; MOV34	P40; S12; MOV34
Homo sapiens	RefSeq	NM_145255.2	ILMN_30170	MRPL10	NM_148887.1	NM_148887.1		124995	22547124	NM_148887.1	MRPL10	NP_683685.1	ILMN_1695472	0006180196	A	1762	CCTCTTCCCCTATACCTGTTCCCACAAATGGCATCCCGCGCATGCTTGCC	17	-	43255668-43255717	17q21.32b	Homo sapiens mitochondrial ribosomal protein L10 (MRPL10), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	MGC17973; RPML8; MRP-L8	MGC17973; MRP-L10; L10MT; RPML8; MRPL8; MRP-L8
Homo sapiens	RefSeq	XM_001725861.1	ILMN_351364	LOC100133017	XM_001725861.1	XM_001725861.1		100133017	169209859	XM_001725861.1	LOC100133017	XP_001725913.1	ILMN_3248334	0004070064	S	112	GGGGGGTAGTGTCCATCCACGAAGGAGCAGAAGGAGGGAGCCACGGGCCC	16	-	32887297-32887346	16p11.2b	PREDICTED: Homo sapiens similar to mCG1031965 (LOC100133017), mRNA.					
Homo sapiens	RefSeq	NM_020347.2	ILMN_27007	LZTFL1	NM_020347.2	NM_020347.2		54585	56676319	NM_020347.2	LZTFL1	NP_065080.1	ILMN_1815705	0006250154	S	3123	GGTGGTTTGAGCCTTGATTAGACTTTTGATGTGCTAAGCCAGACAGGCAG	3	-	45865671-45865720	3p21.31j	Homo sapiens leucine zipper transcription factor-like 1 (LZTFL1), mRNA.				FLJ36386	FLJ36386
Homo sapiens	RefSeq	XR_017601.1	ILMN_168690	LOC391334	XR_017601.1	XR_017601.1		391334	113429383	XR_017601.1	LOC391334		ILMN_3201747	0002490392	A	418	TGTCCCTGTACGCCTCCGTCCGTACCGCCCATGTACAAGGGGTATGCTCT	22	-	39800722-39800771	22q13.2a	PREDICTED: Homo sapiens misc_RNA (LOC391334), miscRNA.					
Homo sapiens	RefSeq	NM_001189.2	ILMN_170035	BAPX1	NM_001189.2	NM_001189.2		579	25121985	NM_001189.2	BAPX1	NP_001180.1	ILMN_1782004	0001780075	S	2011	GGTGATCCCACCTGTCTTGTCAACCTCGCCGCTTTTCGCCTCCTTAATGG	4	-	13151656-13151705	4p15.33c	Homo sapiens bagpipe homeobox homolog 1 (Drosophila) (BAPX1), mRNA.				NKX3B; NKX3-2; MGC138171; NKX3.2	NKX3B; NKX3-2; NKX3.2
Homo sapiens	RefSeq	NM_001032410.1	ILMN_9629	USP16	NM_001032410.1	NM_001032410.1		10600	75992940	NM_001032410.1	USP16	NP_001027582.1	ILMN_1713161	0002260253	I	171	GCTTCATTCTTATGTACCTACCTTTGCACCTTGTAATCATCCTTTATGCC	21	+	29319910-29319959	21q21.3c	Homo sapiens ubiquitin specific peptidase 16 (USP16), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10077596] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 10077596] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 9827704] [evidence TAS]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	UBP-M	UBP-M
Homo sapiens	Unigene	Hs.475353	ILMN_95404	HS.475353	Hs.475353		Hs.475353		19584471	AL713734			ILMN_1846732	0004760315	S	3497	AGACTCTTTCCACATCAAGCTGAGGCATTAGCAGCATTACACGCcacaca					Homo sapiens mRNA; cDNA DKFZp667H0610 (from clone DKFZp667H0610)					
Homo sapiens	RefSeq	NM_017614.3	ILMN_171742	BHMT2	NM_017614.3	NM_017614.3		23743	20544175	NM_017614.3	BHMT2	NP_060084.2	ILMN_2070521	0004210075	S	1693	CTTAAAGATATTAGGTCTGGCCAGGCGAAGTGACTCACACCTGCAATCCC	5	+	78384975-78385024	5q14.1c	Homo sapiens betaine-homocysteine methyltransferase 2 (BHMT2), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine [goid 8898] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: homocysteine + betaine = L-methionine + dimethylglycine [goid 47150] [evidence IEA]	FLJ20001	FLJ20001
Homo sapiens	RefSeq	NM_015136.2	ILMN_13048	STAB1	NM_015136.2	NM_015136.2		23166	61743977	NM_015136.2	STAB1	NP_055951.2	ILMN_1655987	0006040053	S	7641	TTCTCACCGTGGCAAGAAGGGACCAACCCCACCCTGGTCTCTGTCCCCAA	3	+	52532946-52532995	3p21.1d	Homo sapiens stabilin 1 (STAB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 12077138] [evidence IDA]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 12077138] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 12077138] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence ISS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 12077138] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 12077138] [evidence IMP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence ISS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 12077138] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence ISS]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [pmid 12077138] [evidence IDA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence ISS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [pmid 12077138] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12077138] [evidence NAS]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; Interacting selectively with any part of a bacterial cell [goid 8367] [evidence ISS]; Interacting selectively with any part of a bacterial cell [goid 8367] [pmid 12077138] [evidence IDA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [pmid 12077138] [evidence NAS]	CLEVER-1; KIAA0246; STAB-1; FELE-1; FEX1; FEEL-1	CLEVER-1; KIAA0246; STAB-1; FELE-1; FEX1; FEEL-1
Homo sapiens	Unigene	Hs.195725	ILMN_81357	HS.195725	Hs.195725		Hs.195725		16553053	AK057376			ILMN_1834323	0002650037	S	1872	GGACTTTCAGATCCCTCCTCCCAGGCACCCAGGCATCATTTCACAACCCC	2	-	239084119-239084168		Homo sapiens cDNA FLJ32814 fis, clone TESTI2002806					
Homo sapiens	RefSeq	NM_173463.2	ILMN_24542	CCDC149	NM_173463.2	NM_173463.2		91050	33186919	NM_173463.2	CCDC149	NP_775734.1	ILMN_1792276	0006510129	S	5449	ACCACTGCAGGGAAGCCATCTGGAGACTGGGCATCCTGAGAGATTTTCCT	4	-	24437765-24437814	4p15.2c	Homo sapiens coiled-coil domain containing 149 (CCDC149), mRNA.					
Homo sapiens	RefSeq	Hs.126106	ILMN_179100	LOC727992	XM_001127301.1	XM_001127301.1		727992	113426101	XM_001127301.1	LOC727992	XP_001127301.1	ILMN_1896830	0003930092	S	35	GCGCCATCTACTGGGCGAATGCCGTAAGGTCGGTTGTGAGGTCCCGGAAT	16	+	49398118-49398167	16q12.1c	PREDICTED: Homo sapiens similar to hCG2036929 (LOC727992), mRNA.					
Homo sapiens	RefSeq	XM_001722601.1	ILMN_352594	LOC100132276	XM_001722601.1	XM_001722601.1		100132276	169211120	XM_001722601.1	LOC100132276	XP_001722653.1	ILMN_3249210	0007050753	S	2	TGGATTGCTGTGCCTCTCGAGGCTGCAGTGTCCCCACCGGGCCTGCCACC	17	+	134641-134690		PREDICTED: Homo sapiens hypothetical protein LOC100132276 (LOC100132276), mRNA.					
Homo sapiens	RefSeq	NM_001950.3	ILMN_172230	E2F4	NM_001950.3	NM_001950.3		1874	44829053	NM_001950.3	E2F4	NP_001941.2	ILMN_1761828	0003310546	S	1885	AGCCCTGATGATTGGCCCCACCTCCTGCTGCCCCATAACCCTCTCTTCAT	16	+	65790107-65790156	16q22.1a	Homo sapiens E2F transcription factor 4, p107/p130-binding (E2F4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9190208] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that regulates transcription such that the target genes are transcribed during the G1/S phase of the mitotic cell cycle [goid 83] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11418595] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14532282] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11418595] [evidence IPI]	E2F-4	E2F-4
Homo sapiens	RefSeq	NM_201252.1	ILMN_22809	AFAR3	NM_201252.1	NM_201252.1		246181	41152111	NM_201252.1	AFAR3	NP_957704.1	ILMN_1702696	0005270195	S	1817	GTACTTGCCTAGGACTGGGAGGAGGATTGCGAGGAAATGGAGATTCACTG	1	-	19465180-19465229	1p36.13b	Homo sapiens aflatoxin B1 aldehyde reductase 3 (AFAR3), mRNA.				AKR7A4	AKR7A4
Homo sapiens	RefSeq	XM_372749.3	ILMN_31401	LOC390975	XM_372749.3	XM_372749.3		390975	89056949	XM_372749.3	LOC390975	XP_372749.3	ILMN_1691243	0003610674	S	1146	ACTAGATCCAAATCCAAGACCCCAGCACCCAGCGGAGGGTCCAGAACTGG	19	-	60742603-60742652		PREDICTED: Homo sapiens similar to SH3-binding kinase (LOC390975), mRNA.					
Homo sapiens	RefSeq	XM_001724949.1	ILMN_352615	LOC100127885	XM_001724949.1	XM_001724949.1		100127885	169218059	XM_001724949.1	LOC100127885	XP_001725001.1	ILMN_3273383	0002630072	M	5	TGGAACGATGGTTCTTTGAATGCAGCGTCAAACTGGCATTGGGTCACATG				8p23.1a	PREDICTED: Homo sapiens hypothetical LOC100127885 (LOC100127885), mRNA.					
Homo sapiens	RefSeq	XM_934218.1	ILMN_39093	LOC644852	XM_934218.1	XM_934218.1		644852	88943909	XM_934218.1	LOC644852	XP_939311.1	ILMN_1727165	0001050477	I	872	TCCCAGCGCTTTGGCAGGCCAAGGCGGGCAGATCGCTTGAGCTCAACAGT	1	+	245748660-245748709	1q44e	PREDICTED: Homo sapiens hypothetical protein LOC644852, transcript variant 2 (LOC644852), mRNA.					
Homo sapiens	RefSeq	XM_930394.1	ILMN_38433	LOC647326	XM_930394.1	XM_930394.1		647326	88953289	XM_930394.1	LOC647326	XP_935487.1	ILMN_1770473	0000510630	S	2960	GGCGCTTAGCAGAAGCAATGGGACAAGTATGTCTACTGCAGCTTTCTGGA	2	+	87669047-87669096		PREDICTED: Homo sapiens hypothetical protein LOC647326 (LOC647326), mRNA.					
Homo sapiens	RefSeq	NM_016265.2	ILMN_27628	ZNF12	NM_016265.3	NM_016265.3		7559	110349773	NM_016265.3	ZNF12	NP_057349.2	ILMN_1784577	0003930253	S	2695	CAGAAACTCCTGCCTGAAGTCAAACACCTTGTACATCAGAGAGTTCACAC	7	-	6730382-6730431	7p22.1a	Homo sapiens zinc finger protein 12 (ZNF12), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HZF11; ZNF325; KOX3; GIOT-3	ZNF325; KOX3; GIOT-3
Homo sapiens	Unigene	Hs.72367	ILMN_73509	HS.72367	Hs.72367		Hs.72367		8518184	AL359058			ILMN_1867457	0002810008	S	641	GCTCTGAGACTTTGCACGTCAGTAACCACCAACACCATGCCTCTGGTTCC	7	+	149670433-149670482		Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 592473					
Homo sapiens	RefSeq	XM_942575.1	ILMN_40425	LOC650924	XM_942575.1	XM_942575.1		650924	88947764	XM_942575.1	LOC650924	XP_947668.1	ILMN_1804792	0003370070	S	129	TTTATGTTCCAAAATCACTTTGTACTCTGAGAGATATTAGCCTTCCTCAC					PREDICTED: Homo sapiens hypothetical protein LOC650924 (LOC650924), mRNA.					
Homo sapiens	Unigene	Hs.560728	ILMN_114423	HS.560728	Hs.560728		Hs.560728		813226	R51324			ILMN_1886221	0004880064	S	188	CAGAGATGTCTGCTGCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCT	16	-	24135675-24135724		yg72g01.s1 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGE:38786 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038332.1	ILMN_338778	LOC100131737	XR_038332.1	XR_038332.1		100131737	169161126	XR_038332.1	LOC100131737		ILMN_3280294	0003290072	M	1109	GAGAGAGCGAGGAGTTGTCAGGAAAACTGCAGCTTACTTTGAGACAGTCC	1	+	113794913-113794962	1p13.2b	PREDICTED: Homo sapiens misc_RNA (LOC100131737), miscRNA.					
Homo sapiens	RefSeq	NM_001006638.1	ILMN_8592	RAB37	NM_001006638.1	NM_001006638.1		326624	54859684	NM_001006638.1	RAB37	NP_001006639.1	ILMN_2243912	0002100025	I	1850	CCCAATCCTTTGGCAGGCATGCAGCTCCACAGGCGATTTCTTCAAGCAGC	17	+	70254272-70254321	17q25.1b	Homo sapiens RAB37, member RAS oncogene family (RAB37), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ32507; FLJ30284	FLJ32507; FLJ30284
Homo sapiens	RefSeq	NM_001006638.1	ILMN_8592	RAB37	NM_001006638.1	NM_001006638.1		326624	54859684	NM_001006638.1	RAB37	NP_001006639.1	ILMN_1796136	0003830184	I	1462	CCCCCTGAATCCCTGGCTTAGCTACCTTCCTGCCTGTGCACCTAAAAACC	17	+	70253884-70253933	17q25.1b	Homo sapiens RAB37, member RAS oncogene family (RAB37), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ32507; FLJ30284	FLJ32507; FLJ30284
Homo sapiens	RefSeq	NM_175738.3	ILMN_8592	RAB37	NM_001006638.1	NM_001006638.1		326624	54859684	NM_001006638.1	RAB37	NP_001006639.1	ILMN_1676868	0003170022	A	718	ATGTGAATCCCAGGGGGCAGAGAGGAGGCTCTGGAGGCACACAGGATGCA	17	+	70253140-70253145:70253146-70253189	17q25.1b	Homo sapiens RAB37, member RAS oncogene family (RAB37), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ32507; FLJ30284	FLJ32507; FLJ30284
Homo sapiens	RefSeq	XM_942289.1	ILMN_46541	LOC652685	XM_942289.1	XM_942289.1		652685	89076964	XM_942289.1	LOC652685	XP_947382.1	ILMN_1732171	0006760707	S	2621	CCCTCAGCCTCTGGAAGGAACCAGCACTGTGGGACTAATTTACATACTGT					PREDICTED: Homo sapiens similar to PMS1 protein homolog 2 (DNA mismatch repair protein PMS2) (LOC652685), mRNA.					
Homo sapiens	RefSeq	XM_929741.1	ILMN_169076	LOC730031	XM_001132155.1	XM_001132155.1		730031	113417872	XM_001132155.1	LOC730031	XP_001132155.1	ILMN_1773725	0006020349	S	1446	GCAATGGCTGTGGAGGGATGCTGGGGAGTAAAGACAGAGTGCTGTTTCAA	6	+	881546-881595		PREDICTED: Homo sapiens similar to Afadin (Protein AF-6) (LOC730031), mRNA.					
Homo sapiens	RefSeq	NM_198478.1	ILMN_14389	NKPD1	NM_198478.1	NM_198478.1		284353	38348271	NM_198478.1	NKPD1	NP_940880.1	ILMN_1656933	0004860278	S	1979	TGCCAGCATGAGAGCAGGCACAGAAGGACCAGTGAGGAAGTCAGGGTATA				19q13.32a	Homo sapiens NTPase, KAP family P-loop domain containing 1 (NKPD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ33600	FLJ33600
Homo sapiens	RefSeq	NM_182502.1	ILMN_17866	TMPRSS11B	NM_182502.2	NM_182502.2		132724	142377461	NM_182502.2	TMPRSS11B	NP_872308.1	ILMN_1748675	0006480292	S	2471	GAGGTCATCAAGGGCAGAGAACTGTGTGGCATCTCCTTATAGTAAAAGTG	4	-	68775087-68775136	4q13.2b	Homo sapiens transmembrane protease, serine 11B (TMPRSS11B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DKFZp686L1818	DKFZp686L1818
Homo sapiens	RefSeq	NM_006070.4	ILMN_175046	TFG	NM_006070.4	NM_006070.4		10342	56090655	NM_006070.4	TFG	NP_006061.2	ILMN_1779213	0005090044	I	176	TCTGTTCTTCCCCCACCTGCCACGTACAGAGCCCAAGTTCTCGCTAGGCT	3	+	100428335-100428384	3q12.2a	Homo sapiens TRK-fused gene (TFG), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7565764] [evidence NAS]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	TF6; FLJ36137; TRKT3	TF6; FLJ36137; TRKT3
Homo sapiens	RefSeq	NM_006070.4	ILMN_175046	TFG	NM_006070.4	NM_006070.4		10342	56090655	NM_006070.4	TFG	NP_006061.2	ILMN_2341815	0005550133	A	1919	CTAGCTTCCCTTGTCCGGAGGATATTAAAATGCTAGGGTGAGGTTTAGCC	3	+	100467642-100467691	3q12.2a	Homo sapiens TRK-fused gene (TFG), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7565764] [evidence NAS]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	TF6; FLJ36137; TRKT3	TF6; FLJ36137; TRKT3
Homo sapiens	RefSeq	NM_004746.2	ILMN_7460	DLGAP1	NM_004746.2	NM_004746.2		9229	19923273	NM_004746.2	DLGAP1	NP_004737.2	ILMN_1740450	0001400333	I	765	CACAGTACTTCCTGGAGGCCTACAACACCATCAGCGAGCAGGCGGTGAAG	18	-	3879321-3879370	18p11.31e-p11.31d	Homo sapiens discs, large (Drosophila) homolog-associated protein 1 (DLGAP1), transcript variant alpha, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9286858] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9024696] [evidence TAS]	GKAP; DAP-1; DAP-1-BETA; DAP-1-ALPHA; SAPAP1; hGKAP; MGC88156	GKAP; DAP-1; DAP-1-BETA; DAP-1-ALPHA; SAPAP1; hGKAP; MGC88156
Homo sapiens	RefSeq	NM_001432.1	ILMN_168789	EREG	NM_001432.2	NM_001432.2		2069	119703747	NM_001432.2	EREG	NP_001423.1	ILMN_1657248	0000610170	S	3060	CATCTGTGCCCGATTTTAGTATGTGCAGGGGGGCGATCTGGGAATCAGTC	4	+	75252909-75252958	4q13.3e	Homo sapiens epiregulin (EREG), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 14581411] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9337852] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9337852] [evidence TAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells [goid 1550] [evidence ISS]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of production of a cytokine [goid 1819] [evidence ISS]; Progression through the nuclear division phase of a meiotic cell cycle in the female germline [goid 7143] [evidence ISS]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence ISS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 14581411] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The synthesis of messenger RNA (mRNA) from a DNA template [goid 9299] [pmid 10681561] [evidence IDA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9337852] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 14581411] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 9419975] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [pmid 10681561] [evidence TAS]; The release of a mature ovum/oocyte from an ovary [goid 30728] [evidence ISS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 12898511] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 9419975] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 10681561] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 9990076] [evidence ISS]; The series of molecular signals mediated by luteinizing hormone [goid 42700] [evidence ISS]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [pmid 10681561] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45089] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 9990076] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 9337852] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 10681561] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor activity [goid 45741] [pmid 9990076] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [pmid 9990076] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 12702554] [evidence IDA]; The stage in oogenesis when a single layer of cuboidal follicle cells surrounds the oocyte. The oocyte nucleus is large [goid 48160] [evidence ISS]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [pmid 9990076] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [pmid 10681561] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle cell differentiation [goid 51151] [pmid 14581411] [evidence IDA]	Interacting selectively with the epidermal growth factor receptor [goid 5154] [pmid 10681561] [evidence TAS]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9419975] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9419975] [evidence IDA]	ER	ER
Homo sapiens	RefSeq	NM_144995.2	ILMN_137483	DHX57	NM_144995.2	NM_144995.2		90957	39777581	NM_144995.2	DHX57	NP_659432.2	ILMN_1732226	0000990139	I	1495	TGCTCAATAGCCACATGTAGCCAGGTGTTGCTGTATTGGACAGCACAGGT	2	-	38937739-38937769:38937770-38937788	2p22.1c	Homo sapiens DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 (DHX57), transcript variant 3, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DDX57; FLJ32861	DDX57; FLJ32861
Homo sapiens	Unigene	Hs.539760	ILMN_104725	HS.539760	Hs.539760		Hs.539760		2715749	AA705831			ILMN_1875980	0001780110	S	194	GCACCTCTTCCATGGAGACTTCCCCAGCCACTCTGATCATGACTGTGAGG	13	+	33005892-33005941		ah42d07.s1 Soares_testis_NHT Homo sapiens cDNA clone 1292173 3, mRNA sequence					
Homo sapiens	RefSeq	XM_937530.1	ILMN_37223	LOC647279	XM_930341.1	XM_930341.1		647279	89036789	XM_930341.1	LOC647279	XP_935434.1	ILMN_1695421	0004610564	S	181	AACCAGGTGATTGGCAGGTGGACACCCTATTTAGTGATGGAATATGCCCT	13	-	72880218-72880267	13q22.1a	PREDICTED: Homo sapiens similar to MAP/microtubule affinity-regulating kinase 3 (LOC647279), mRNA.					
Homo sapiens	Unigene	Hs.573799	ILMN_125980	HS.573799	Hs.573799		Hs.573799		47293355	CN276941			ILMN_1917174	0004150717	S	345	GGGGGTGGACTCACTACACTGGAATCAAGAGGCCGGTAAAAGAGACCTGG					17000600172763 GRN_PRENEU Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NM_019612.2	ILMN_4170	IRGC	NM_019612.2	NM_019612.2		56269	45433541	NM_019612.2	IRGC	NP_062558.1	ILMN_1789446	0000610162	S	1422	GGAGGAAGCCCCACTCTCAACCTGCAGGAAGCTCGGCCTCCTTCTTAAGT	19	+	48915849-48915898	19q13.31b	Homo sapiens immunity-related GTPase family, cinema (IRGC), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	IRGC1; CINEMA; R30953_1; Iigp5	IRGC1; CINEMA; R30953_1; Iigp5
Homo sapiens	RefSeq	NM_032803.3	ILMN_163456	SLC7A3	NM_032803.4	NM_032803.4		84889	114326543	NM_032803.4	SLC7A3	NP_116192.4	ILMN_1660730	0003870541	S	1859	GGCCCGATTTGGGGTCTGGATGCTGATTGGCTTTGCTATCTACTTCGGCT	X	-	70145772-70145793:70145920-70145947	Xq13.1c	Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 (SLC7A3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IEA]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the stereospecific transfer of arginine, 2-amino-5-guanidinopentanoic acid, across a biological membrane [goid 15181] [evidence IEA]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IEA]; Catalysis of the transfer of a positively charged amino acid from one side of the membrane to the other [goid 15326] [evidence IEA]	CAT-3; ATRC3; FLJ14541; MGC20687	CAT-3; ATRC3; FLJ14541; MGC20687
Homo sapiens	RefSeq	NM_022744.1	ILMN_23463	C16ORF58	NM_022744.1	NM_022744.1		64755	12232402	NM_022744.1	C16orf58	NP_073581.1	ILMN_1685289	0006940647	S	2695	GGCTTTAATCACCAACCCATCAACATCAAGCCTCCCCCAGGCCGGTTCAA	16	-	31408331-31408380	16p11.2c	Homo sapiens chromosome 16 open reading frame 58 (C16orf58), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ13868	FLJ13868
Homo sapiens	RefSeq	NM_018282.1	ILMN_169122	PSPC1	NR_003272.1	NR_003272.1		55269	118572597	NR_003272.1	PSPC1		ILMN_1724490	0005690563	S	1277	TCCGACACAGAGAACAGGAGGAACTGAGGCGACAGCAAGAGGGCTTTAAG	13	-	20304396-20304445	13q12.11a	Homo sapiens paraspeckle component 1 (PSPC1), transcript variant beta, transcribed RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ10955; PSP1; DKFZp566B1447	FLJ10955; PSP1; DKFZp566B1447
Homo sapiens	Unigene	Hs.17661	ILMN_71515	HS.17661	Hs.17661		Hs.17661		27838236	BX113460			ILMN_1902998	0002600543	S	265	GTCAAGGCAATGCCATCATCAAGGGAGCCAATCTTCCAGTAGACAGGGGC	1	+	117485974-117486023		BX113460 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998F10115, mRNA sequence					
Homo sapiens	RefSeq	XM_932071.1	ILMN_31720	LOC120376	XM_943506.2	XM_943506.2		120376	113423106	XM_943506.2	LOC120376	XP_948599.2	ILMN_1658318	0004760634	S	1064	CGCCAGTGCAGCTGCCTTCATATGCTCCAGAGAATTACAATTCCCCTGCT				11q23.1a	PREDICTED: Homo sapiens hypothetical protein LOC120376 (LOC120376), mRNA.					
Homo sapiens	RefSeq	NM_006730.2	ILMN_6814	DNASE1L1	NM_006730.2	NM_006730.2		1774	58430940	NM_006730.2	DNASE1L1	NP_006721.1	ILMN_1681695	0004040546	A	1293	AGGACGTGATCCTGCTTGGGGACTTCAATGCTGACTGCGCTTCACTGACC	X	-	153631483-153631531:153631610-153631610	Xq28g	Homo sapiens deoxyribonuclease I-like 1 (DNASE1L1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9205125] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [pmid 9205125] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DNL1L; XIB; DNAS1L1; DNASEX	DNL1L; XIB; DNAS1L1; DNASEX
Homo sapiens	RefSeq	XM_001133026.1	ILMN_170629	LOC729120	XM_001133026.1	XM_001133026.1		729120	113425621	XM_001133026.1	LOC729120	XP_001133026.1	ILMN_3298410	0002260161	M	984	GGCCAAGGCGGGTGGATTGCCTGAGCTCAGGAGTTCAAGATCAGTCTGGA				15q21.3c	PREDICTED: Homo sapiens hypothetical LOC729120 (LOC729120), mRNA.					
Homo sapiens	RefSeq	NM_001039775.2	ILMN_45818	AIM1L	NM_001039775.2	NM_001039775.2		55057	163954926	NM_001039775.2	AIM1L	NP_001034864.1	ILMN_3307874	0007000082	S	2150	ATCTGCAGCCAGATGTTCGAAGGCCAGATCCTGGACGTGAAGGGAGGCCG	1	-	26648540-26648547:26648655-26648696	1p36.11b	Homo sapiens absent in melanoma 1-like (AIM1L), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	FLJ38020; FLJ10040; DKFZp434L1713	FLJ38020; FLJ10040; DKFZp434L1713
Homo sapiens	RefSeq	NM_145045.3	ILMN_26137	MGC20983	NM_145045.3	NM_145045.3		115948	40068494	NM_145045.3	MGC20983	NP_659482.2	ILMN_1743095	0004260615	S	1838	CCCAGAAATTAATCGAAAGTCACAAGAAGCACCGTCGCTCTCGGAGGTCC	19	-	11392506-11392555	19p13.2b	Homo sapiens hypothetical protein MGC20983 (MGC20983), mRNA.				FLJ31801	FLJ31801
Homo sapiens	RefSeq	NM_006129.2	ILMN_6483	BMP1	NM_006129.2	NM_006129.2		649	5902809	NM_006129.2	BMP1	NP_006120.1	ILMN_1800412	0005570324	I	3249	AGGGAATGTCAGCAGGACCCCATCGCCATCCCTGTGTCTCTACACGCTGT	8	+	22125474-22125523	8p21.3a	Homo sapiens bone morphogenetic protein 1 (BMP1), transcript variant BMP1-3, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [pmid 3201241] [evidence TAS]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 16824737] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7798260] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 16824737] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	PCOLC; FLJ44432; TLD; PCP	PCOLC; FLJ44432; TLD; PCP
Homo sapiens	RefSeq	NM_032326.2	ILMN_5253	TMEM175	NM_032326.2	NM_032326.2		84286	34147414	NM_032326.2	TMEM175	NP_115702.1	ILMN_1654629	0001090564	S	1685	AGCCAAGTCACGGGCAGGCCGCAGTGGTTCTTGCGTGGCCTGGTTTTATT	4	+	942105-942154	4p16.3c	Homo sapiens transmembrane protein 175 (TMEM175), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC4618	MGC4618
Homo sapiens	RefSeq	XM_930420.1	ILMN_40106	LOC644961	XM_930420.1	XM_930420.1		644961	88942514	XM_930420.1	LOC644961	XP_935513.1	ILMN_1792423	0002850309	S	181	GCTCTCAATACACCTGGTGTAGCCAGGGAGAGAGTTGTAGGCCAGCAGGA	1	+	27521660-27521709	1p36.11a	PREDICTED: Homo sapiens similar to cytoplasmic beta-actin (LOC644961), mRNA.					
Homo sapiens	RefSeq	NM_144994.7	ILMN_32220	ANKRD23	NM_144994.7	NM_144994.7		200539	89264742	NM_144994.7	ANKRD23	NP_659431.5	ILMN_2227338	0001300634	S	2280	GGCATTTGGCCATGGTTCCTTTTCGTCTACCTTTGGGGGCCTTCTCAGGC	2	-	97503903-97503952	2q11.2a	Homo sapiens ankyrin repeat domain 23 (ANKRD23), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FLJ32449; MARP3; MGC129593; DARP	FLJ32449; MARP3; MGC129593; DARP
Homo sapiens	RefSeq	NM_003334.3	ILMN_10467	UBA1	NM_003334.3	NM_003334.3		7317	163659922	NM_003334.3	UBA1	NP_003325.2	ILMN_3297945	0006860500	M	3345	ACGACGAGAGCGGCGAGGATGTCGAGGTTCCCTATGTCCGATACACCATC	X	+	47074273-47074322	Xp11.3a	Homo sapiens ubiquitin-like modifier activating enzyme 1 (UBA1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17956732] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16227972] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the activation of small proteins, such as ubiquitin or ubiquitin-like proteins, through the formation of an ATP-dependent high-energy thiolester bond [goid 8641] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBA1A; A1S9; A1ST; UBE1X; MGC4781; A1S9T; UBE1; GXP1	UBA1A; A1S9; A1ST; UBE1X; MGC4781; A1S9T; UBE1; GXP1
Homo sapiens	RefSeq	NM_205855.1	ILMN_3146	UNQ1940	NM_205855.1	NM_205855.1		389558	45504350	NM_205855.1	UNQ1940	NP_995327.1	ILMN_1663815	0003450491	S	821	GATTCATGCCATCATGTGACCTGGGCTGGAAGAAAGGGCTGGAATGGTCA	7	-	135069033-135069082	7q33c	Homo sapiens HWKM1940 (UNQ1940), mRNA.					
Homo sapiens	RefSeq	NM_182554.2	ILMN_30354	C10ORF53	NM_182554.2	NM_182554.2		282966	109452601	NM_182554.2	C10orf53	NP_872360.2	ILMN_2298611	0001240181	I	683	GGCAACCTGTGGCAAACCCAACGTGATTCTCCCCAGCTCTGAGTCTCTAC	10	+	50586818-50586867	10q11.23a	Homo sapiens chromosome 10 open reading frame 53 (C10orf53), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	XM_929256.1	ILMN_37293	LOC646320	XM_929256.1	XM_929256.1		646320	89033914	XM_929256.1	LOC646320	XP_934349.1	ILMN_1682423	0005690086	S	121	AGACCCCAACCCACCAAGCGGCCTGACGCCAAGGGAAAACCATCTCCCTT	11	+	38459788-38459837		PREDICTED: Homo sapiens hypothetical protein LOC646320 (LOC646320), mRNA.					
Homo sapiens	RefSeq	XM_001725539.1	ILMN_350392	LOC100133179	XM_001725539.1	XM_001725539.1		100133179	169171194	XM_001725539.1	LOC100133179	XP_001725591.1	ILMN_3247691	0002360075	S	1	CTCCTCGATGTCCACGAGCTTGGTGATGAAGTCCTTCAGCTGCGCCACGC	7	+	101921284-101921290:101921291-101921333	7q22.1e	PREDICTED: Homo sapiens hypothetical protein LOC100133179 (LOC100133179), mRNA.					
Homo sapiens	RefSeq	XM_943445.1	ILMN_37539	LOC648738	XM_943445.1	XM_943445.1		648738	89030212	XM_943445.1	LOC648738	XP_948538.1	ILMN_1787630	0000520735	S	241	AAACATAAAGAGAGAGATACATTTTCAGCATCTTGTGTTGCTGAAATATT					PREDICTED: Homo sapiens hypothetical protein LOC648738 (LOC648738), mRNA.					
Homo sapiens	RefSeq	XR_036846.1	ILMN_347851	LOC731718	XR_036846.1	XR_036846.1		731718	169168587	XR_036846.1	LOC731718		ILMN_3245914	0006290195	S	359	GGCGAAATGAGCACGGCGGGGGGCGGGTCCATCCTAAGGTGACTGTGTAT					PREDICTED: Homo sapiens misc_RNA (LOC731718), miscRNA.					
Homo sapiens	RefSeq	XM_001714763.1	ILMN_340634	LOC100129951	XM_001714763.1	XM_001714763.1		100129951	169172045	XM_001714763.1	LOC100129951	XP_001714815.1	ILMN_3259687	0006450441	M	317	CTATTAGCGGAAAACATTTGGAACTTAAGGAGTGTTTTACATTTGGAACT				7q36.3b	PREDICTED: Homo sapiens hypothetical protein LOC100129951 (LOC100129951), mRNA.					
Homo sapiens	RefSeq	NM_001107.3	ILMN_22509	ACYP1	NM_001107.3	NM_001107.3		97	45243543	NM_001107.3	ACYP1	NP_001098.1	ILMN_2319825	0003440689	A	61	CGGTGGGGAAGACAAGGAGGGTTTGAGCATGGCAGAAGGAAACACCCTGA	14	-	75530234-75530256:75530257-75530264:75530657-75530675	14q24.3b	Homo sapiens acylphosphatase 1, erythrocyte (common) type (ACYP1), transcript variant 1, mRNA.		The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 3026468] [evidence TAS]	Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [evidence IEA]; Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [pmid 7796909] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ACYPE	ACYPE
Homo sapiens	RefSeq	NM_203488.1	ILMN_22509	ACYP1	NM_001107.3	NM_001107.3		97	45243543	NM_001107.3	ACYP1	NP_001098.1	ILMN_1694233	0005910148	A	248	GGTCCCATCTCCAAGGTGCGTCATATGCAGGAATGGCTTGAAACAAGAGG	14	-	75520237-75520286	14q24.3b	Homo sapiens acylphosphatase 1, erythrocyte (common) type (ACYP1), transcript variant 1, mRNA.		The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 3026468] [evidence TAS]	Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [evidence IEA]; Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [pmid 7796909] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ACYPE	ACYPE
Homo sapiens	RefSeq	NM_003690.3	ILMN_3524	PRKRA	NM_003690.3	NM_003690.3		8575	32261293	NM_003690.3	PRKRA	NP_003681.1	ILMN_1758474	0000770021	S	1421	CAAAGGAAGCCCTTTAGAATTAGAGTCTTGAGGGACAGCACTAACAGGCC	2	-	179004648-179004697	2q31.2b	Homo sapiens protein kinase, interferon-inducible double stranded RNA dependent activator (PRKRA), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9687506] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9687506] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9687506] [evidence TAS]; The process by which the anatomical structures of the outer ear are generated and organized. Morphogenesis pertains to the creation of form. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull [goid 42473] [evidence IEA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IEA]	Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [pmid 9687506] [evidence TAS]	RAX; HSD14; PACT	RAX; HSD14; PACT
Homo sapiens	RefSeq	NM_006108.1	ILMN_7397	SPON1	NM_006108.2	NM_006108.2		10418	110347422	NM_006108.2	SPON1	NP_006099.2	ILMN_1791890	0003370162	S	4826	CAAGGACAAGCCACCCTAGTGTCTCATGTTTGTATTTGGTCCCAGTTGGG	11	+	14244312-14244361	11p15.2b	Homo sapiens spondin 1, extracellular matrix protein (SPON1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0762; MGC10724; f-spondin	KIAA0762; f-spondin; MGC10724
Homo sapiens	RefSeq	XM_936215.1	ILMN_35327	LOC653874	XM_936215.1	XM_936215.1		653874	88988538	XM_936215.1	LOC653874	XP_941308.1	ILMN_1778543	0007330301	A	201	GGTAAACAGAATCTGGTGATTATGGGTAAGAAGACCTGGTTCTCCATTCC					PREDICTED: Homo sapiens similar to Dihydrofolate reductase, transcript variant 1 (LOC653874), mRNA.					
Homo sapiens	RefSeq	NM_000026.1	ILMN_7521	ADSL	NM_000026.1	NM_000026.1		158	4557268	NM_000026.1	ADSL	NP_000017.1	ILMN_1790757	0005870228	S	1348	TCACTGGTCGTGCCTCCCAGCAGGTGCAGAGATTCTTAGAAGAGGAGGTG	22	+	39090986-39091006:39092386-39092414	22q13.1e	Homo sapiens adenylosuccinate lyase (ADSL), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8366112] [evidence EXP]	The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate [goid 6167] [pmid 11428554] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a purine ribonucleotide, a compound consisting of ribonucleoside (a purine base linked to a ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9152] [evidence IEA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [pmid 16973378] [evidence IDA]	Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP [goid 4018] [pmid 10888601] [evidence IDA]; Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP [goid 4018] [pmid 8366112] [evidence EXP]; Catalysis of the reaction: N6-(1,2-dicarboxyethyl)AMP = fumarate + AMP [goid 4018] [pmid 16973378] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]		
Homo sapiens	RefSeq	NM_130809.2	ILMN_24905	PRRC1	NM_130809.2	NM_130809.2		133619	31377624	NM_130809.2	PRRC1	NP_570721.1	ILMN_1685140	0007040397	S	4141	CCCTAGACCTAAACTGTGTCACAGACTTCTGAATGTTTAGGCAGTGCTAG	5	+	126918169-126918218	5q23.2f	Homo sapiens proline-rich coiled-coil 1 (PRRC1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	FLJ32875	FLJ32875
Homo sapiens	RefSeq	NM_001001675.1	ILMN_2217	ZNF818	NM_001001675.1	NM_001001675.1		390963	48717336	NM_001001675.1	ZNF818	NP_001001675.1	ILMN_1654858	0000460239	S	2076	AAAGTCATGCTTATTGTGTTCAGTGTGCCCTTCTCCAGAGGGCCACTGGC	19	+	58410115-58410164	19q13.41b	Homo sapiens zinc finger protein 818 (ZNF818), mRNA.				FLJ46385	FLJ46385
Homo sapiens	RefSeq	NM_130786.2	ILMN_18893	A1BG	NM_130786.2	NM_130786.2		1	21071029	NM_130786.2	A1BG	NP_570602.2	ILMN_1736007	0006370619	S	2512	GCAGAGCTGGACGCTGTGGAAATGGCTGGATTCCTCTGTGTTCTTTCCCA	19	-	63549180-63549229	19q13.43c	Homo sapiens alpha-1-B glycoprotein (A1BG), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3458201] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	A1B; GAB; HYST2477; ABG; DKFZp686F0970	A1B; GAB; HYST2477; ABG; DKFZp686F0970
Homo sapiens	RefSeq	NM_030589.2	ILMN_18727	CYP2A7	NM_030589.2	NM_030589.2		1549	15147327	NM_030589.2	CYP2A7	NP_085079.2	ILMN_2408764	0004780202	A	1597	GCTTCTTCTCCAACCCTCAGGACTTCAATCCCCAGCATTTCCTGGATGAC	19	-	46074317-46074366	19q13.2b	Homo sapiens cytochrome P450, family 2, subfamily A, polypeptide 7 (CYP2A7), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 7864805] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	P450-IIA4; CPA7; CYPIIA7; CYP2A; CPAD	CPA7; CPAD; P450-IIA4; CYPIIA7; CYP2A
Homo sapiens	RefSeq	NM_030589.2	ILMN_18727	CYP2A7	NM_030589.2	NM_030589.2		1549	15147327	NM_030589.2	CYP2A7	NP_085079.2	ILMN_1779051	0004120102	A	1497	TTGGCCCGCAGGGTTAAAAAGGACACCAAGTTTCGGGATTTTTTCCTCCC	19	-	46074938-46074987	19q13.2b	Homo sapiens cytochrome P450, family 2, subfamily A, polypeptide 7 (CYP2A7), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 7864805] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	P450-IIA4; CPA7; CYPIIA7; CYP2A; CPAD	CPA7; CPAD; P450-IIA4; CYPIIA7; CYP2A
Homo sapiens	RefSeq	XM_925909.1	ILMN_39295	LOC642380	XM_925909.1	XM_925909.1		642380	88973793	XM_925909.1	LOC642380	XP_931002.1	ILMN_1675281	0001820491	S	32	TGTTAAATGGTTGTGATCAAAATGCTGATAGTGATATGGACAATGAAGTT	4	+	33867638-33867687		PREDICTED: Homo sapiens similar to heat shock protein 90Bf (LOC642380), mRNA.					
Homo sapiens	RefSeq	NR_002215.1	ILMN_17581	C21ORF41	NR_002215.1	NR_002215.1		54073	59624971	NR_002215.1	C21orf41		ILMN_2267383	0006060747	I	645	AGTCGTCTCCCAAGCTAATGACACAAGCATATGGGCAAGGTTCTTGCTGG	21	-	29621476-29621525	21q21.3c	Homo sapiens chromosome 21 open reading frame 41 (C21orf41) on chromosome 21.					
Homo sapiens	RefSeq	NR_002215.1	ILMN_17581	C21ORF41	NR_002215.1	NR_002215.1		54073	59624971	NR_002215.1	C21orf41		ILMN_1762061	0007200180	I	340	GAACCAGGGTTGCTGATTAAGTGACCACAGGCCATGGTTCAGCTTCTCAA	21	-	29623874-29623885:29876503-29876540	21q21.3c	Homo sapiens chromosome 21 open reading frame 41 (C21orf41) on chromosome 21.					
Homo sapiens	RefSeq	NM_017641.2	ILMN_25772	KIF21A	NM_017641.2	NM_017641.2		55605	38569483	NM_017641.2	KIF21A	NP_060111.2	ILMN_1681249	0001660593	S	6010	GTTTGCGAACCTTGGTAGCTATGATGAGAGCTATTATCATCTGTGGTGGG	12	-	39687298-39687347	12q12b	Homo sapiens kinesin family member 21A (KIF21A), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ20052; FEOM; DKFZp779C159; KIAA1708; FEOM1; CFEOM1; CFEOM	FLJ20052; FEOM; DKFZp779C159; KIAA1708; FEOM1; CFEOM1; CFEOM
Homo sapiens	RefSeq	NM_207585.1	ILMN_23191	IFNAR2	NM_207585.1	NM_207585.1		3455	46488936	NM_207585.1	IFNAR2	NP_997468.1	ILMN_1791057	0000450397	I	2681	AACAGGGAAGAGCCATCGAAGTTTCAGTCGGTGAGCCTTGGGCACCTCAC	21	+	33558480-33558529	21q22.11c	Homo sapiens interferon (alpha, beta and omega) receptor 2 (IFNAR2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 7588638] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8969169] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7588638] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8798579] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 7588638] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 7588638] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a type I interferon to initiate a change in cell activity. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families [goid 4905] [pmid 8798579] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11046044] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17923090] [evidence IPI]	IFN-alpha-REC; IFNABR; IFNARB; IFN-R	IFN-alpha-REC; IFNABR; IFNARB; IFN-R
Homo sapiens	RefSeq	NM_207009.2	ILMN_28113	FAM45A	NM_207009.2	NM_207009.2		404636	46358410	NM_207009.2	FAM45A	NP_996892.1	ILMN_1691760	0000990711	S	1935	AACTTCCTACAGGGGCCAAAACCAGAGAAAGGCTTCCAGCAACTTCGATG	10	+	120886228-120886277	10q26.11c	Homo sapiens family with sequence similarity 45, member A (FAM45A), mRNA.					
Homo sapiens	RefSeq	XM_926900.1	ILMN_34845	LOC643596	XM_926900.1	XM_926900.1		643596	89030136	XM_926900.1	LOC643596	XP_931993.1	ILMN_2126265	0007050674	S	169	AAGTCTGGTGTGGACACACTGATCATACCTCCCGGAACCTGGGCCTCCCA	9	+	139241675-139241677:139241794-139241840	9q34.3f	PREDICTED: Homo sapiens similar to C06A5.8a (LOC643596), mRNA.					
Homo sapiens	RefSeq	XM_932614.1	ILMN_42741	LOC645066	XM_932614.1	XM_932614.1		645066	88978576	XM_932614.1	LOC645066	XP_937707.1	ILMN_1665952	0006940630	S	246	GAAAGTCATGGAGAGGATTTCAGATGATAGAAGTCGGGCAATTATCCCAG	4	+	163967-164016		PREDICTED: Homo sapiens hypothetical protein LOC645066 (LOC645066), mRNA.					
Homo sapiens	RefSeq	XM_943536.1	ILMN_34182	LOC648997	XM_943536.1	XM_943536.1		648997	89030568	XM_943536.1	LOC648997	XP_948629.1	ILMN_1660752	0001980376	S	319	CGGGAGCGGGGCGGCCGGGAAGAGTTTCCAGTGGGGAAAGTTGGCGGTGA					PREDICTED: Homo sapiens hypothetical protein LOC648997 (LOC648997), mRNA.					
Homo sapiens	RefSeq	NM_001343.1	ILMN_162394	DAB2	NM_001343.2	NM_001343.2		1601	148491081	NM_001343.2	DAB2	NP_001334.2	ILMN_1764228	0000610152	S	3150	GAACACCTGCCTTCTACCCTCTGGTTGGGAGATGCAGCCACCACATCCCT	5	-	39411864-39411913	5p13.1c	Homo sapiens disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) (DAB2), mRNA.	An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [pmid 12857860] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence IEA]; The process whereby cells take in liquid material from their external environment; literally 'cell drinking'. Liquid is enclosed in vesicles, formed by invagination of the plasma membrane. These vesicles then move into the cell and pass their contents to endosomes [goid 6907] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9620555] [evidence TAS]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 15837803] [evidence IPI]	FLJ26626; DOC2; DOC-2	DOC2; DOC-2
Homo sapiens	RefSeq	NM_013365.3	ILMN_25525	GGA1	NM_013365.3	NM_013365.3		26088	48527950	NM_013365.3	GGA1	NP_037497.1	ILMN_1681668	0000130102	I	1241	CCTGTATAAGCAGCTGGTGCGGGGTGAGGAGGTCAACGGTGATGCCACAG	22	+	36350965-36351014	22q13.1a	Homo sapiens golgi associated, gamma adaptin ear containing, ARF binding protein 1 (GGA1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 20214818] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 20211637] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12505986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15143060] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12679809] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_001001561.1	ILMN_25525	GGA1	NM_013365.3	NM_013365.3		26088	48527950	NM_013365.3	GGA1	NP_037497.1	ILMN_1658175	0006250414	A	516	CTGGCCCACAAGATCCAGTCCCCACAGGAGTGGGAGGCGATCCAGGCCTT	22	+	36342897-36342946	22q13.1a	Homo sapiens golgi associated, gamma adaptin ear containing, ARF binding protein 1 (GGA1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 20214818] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; A membrane coat adaptor complex that links clathrin to a membrane [goid 30131] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 20211637] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12505986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15143060] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12679809] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_181686.1	ILMN_28209	KRTAP12-1	NM_181686.1	NM_181686.1		353332	32140179	NM_181686.1	KRTAP12-1	NP_859014.1	ILMN_2173797	0007380220	S	472	TATAATAGAATGATCTGGAGCCCTGGCTGAACTTGCCTATCCCCCCAGGG	21	-	46101557-46101606	21q22.3d	Homo sapiens keratin associated protein 12-1 (KRTAP12-1), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KAP12.1; KRTAP12.1	KAP12.1; KRTAP12.1
Homo sapiens	RefSeq	NM_005573.2	ILMN_4100	LMNB1	NM_005573.2	NM_005573.2		4001	27436949	NM_005573.2	LMNB1	NP_005564.1	ILMN_2126706	0003420593	S	2070	GAACTTTTCCACCAGCAGGGAACCCCAAGAGCATCCAATAGAAGCTGTGC	5	+	126154649-126154698	5q23.2e	Homo sapiens lamin B1 (LMNB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IEA]; Any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope. They are classified as lamins A, B and C [goid 5638] [pmid 7557986] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 7557986] [evidence TAS]	MGC111419; LMN; ADLD; LMNB; LMN2	LMN; LMN2; MGC111419; ADLD; LMNB
Homo sapiens	RefSeq	NM_152667.1	ILMN_27532	NANP	NM_152667.1	NM_152667.1		140838	23308748	NM_152667.1	NANP	NP_689880.1	ILMN_1667132	0004040437	S	1551	CTGTCTTTTCCCAGACACACAGTGGGGTTGAGGGAGCTAGGCTGTTTTGC	20	-	25543737-25543786	20p11.21a	Homo sapiens N-acetylneuraminic acid phosphatase (NANP), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid [goid 46380] [pmid 16237198] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate [goid 8967] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylneuraminate 9-phosphate + H2O = N-acylneuraminate + phosphate [goid 50124] [pmid 16237198] [evidence IDA]	MGC26833; HDHD4; dJ694B14.3; C20orf147	MGC26833; HDHD4; dJ694B14.3; C20orf147
Homo sapiens	RefSeq	NM_152667.1	ILMN_27532	NANP	NM_152667.1	NM_152667.1		140838	23308748	NM_152667.1	NANP	NP_689880.1	ILMN_2064132	0006980097	S	2184	ATGGCTACATAGCAAGGCATCGTCTTGGAACCGGAGAATTTTCTCTAGAC	20	-	25543104-25543153	20p11.21a	Homo sapiens N-acetylneuraminic acid phosphatase (NANP), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid [goid 46380] [pmid 16237198] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 2-phosphoglycolate + H2O = glycolate + phosphate [goid 8967] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: N-acylneuraminate 9-phosphate + H2O = N-acylneuraminate + phosphate [goid 50124] [pmid 16237198] [evidence IDA]	MGC26833; HDHD4; dJ694B14.3; C20orf147	MGC26833; HDHD4; dJ694B14.3; C20orf147
Homo sapiens	Unigene	Hs.555138	ILMN_112199	HS.555138	Hs.555138		Hs.555138		19585940	BM968353			ILMN_1878712	0001030138	S	194	GTTGGTAAGTTGGTGCTGGCTGGTTGCTTCCTCTCCAAGAAGGTGTCTGC	12	+	45060291-45060340		UI-CF-DU1-aap-e-15-0-UI.s1 UI-CF-DU1 Homo sapiens cDNA clone UI-CF-DU1-aap-e-15-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_133264.4	ILMN_22542	WIPF2	NM_133264.4	NM_133264.4		147179	75812910	NM_133264.4	WIPF2	NP_573571.1	ILMN_1775171	0000450092	S	5072	TCACTTGAAATAATCTGTAGGCTGAGTGCTTATGGGGGTGGGGGAGAAGG	17	+	35691512-35691561	17q21.2a	Homo sapiens WAS/WASL interacting protein family, member 2 (WIPF2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	WIRE; WICH	WIRE; WICH
Homo sapiens	RefSeq	NM_001235.2	ILMN_28241	SERPINH1	NM_001235.2	NM_001235.2		871	32454740	NM_001235.2	SERPINH1	NP_001226.2	ILMN_1751028	0007650017	S	1876	GCTGCCTCCCCAGCTCTATCCCAACCTCTCCCAACTATAAAACTAGGTGC	11	+	74961166-74961215	11q13.5a	Homo sapiens serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) (SERPINH1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 7656593] [evidence NAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 1309665] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 10023073] [evidence TAS]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 1309665] [evidence TAS]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 7656593] [evidence NAS]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	RA-A47; AsTP3; PIG14; gp46; CBP1; PPROM; HSP47; SERPINH2; CBP2	RA-A47; AsTP3; PIG14; gp46; CBP1; PPROM; HSP47; SERPINH2; CBP2
Homo sapiens	RefSeq	NM_033520.1	ILMN_9180	C19ORF33	NM_033520.1	NM_033520.1		64073	41281602	NM_033520.1	C19orf33	NP_277055.1	ILMN_1717793	0000630470	S	273	TCCAGCGATTCGGACACGGATGTGAAGTCCCACGCTGCTGGCTCCAAGCA	19	+	38795300-38795326:38795485-38795507	19q13.2a	Homo sapiens chromosome 19 open reading frame 33 (C19orf33), mRNA.				MGC39135; IMUP-1; H2RSP; IMUP; MGC75180; IMUP-2	MGC39135; IMUP-1; H2RSP; IMUP; MGC75180; IMUP-2
Homo sapiens	RefSeq	NM_001004285.1	ILMN_15064	DFFB	NM_001004285.1	NM_001004285.1		1677	51988889	NM_001004285.1	DFFB	NP_001004285.1	ILMN_2384133	0002350523	A	2679	TGTCACAGTTTCAGGCTTTTATGAGGAAAGCGTTTCTGTGTAGAAACTGG	1	+	3791454-3791503	1p36.32b	Homo sapiens DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) (DFFB), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10959840] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9108473] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9108473] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 15572351] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9108473] [evidence TAS]; The compaction of chromatin during apoptosis [goid 30263] [pmid 10959840] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nicotinate D-ribonucleotide + diphosphate = nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4516] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA];  [goid 4537] [pmid 9671700] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 10959840] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CAD; DFF40; DFF-40; DFF2; CPAN	CAD; DFF40; DFF-40; DFF2; CPAN
Homo sapiens	RefSeq	NM_001042600.1	ILMN_170122	MAP4K1	NM_001042600.1	NM_001042600.1		11184	110611907	NM_001042600.1	MAP4K1	NP_001036065.1	ILMN_2365111	0006660368	A	2366	TGGAGGCCGTGGCTATGGTTGGAGGTCAGCTTCAGGCCTTCTGGAAGCAT	19	-	43777997-43778035:43778120-43778130	19q13.2a	Homo sapiens mitogen-activated protein kinase kinase kinase kinase 1 (MAP4K1), transcript variant 1, mRNA.		Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase [goid 185] [pmid 11053428] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 8824585] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 8824585] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 8824585] [evidence TAS]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [pmid 11053428] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; Any process that modulates the frequency, rate or extent of hemocyte differentiation [goid 45610] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8824585] [evidence IDA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8824585] [evidence IDA]; Catalysis of the phosphorylation of serine and threonine residues in a mitogen-activated protein kinase kinase kinase (MAPKKK), resulting in activation of MAPKKK. MAPKKK signaling pathways relay, amplify and integrate signals from the plasma membrane to the nucleus in response to a diverse range of extracellular stimuli [goid 8349] [pmid 11053428] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	HPK1	HPK1
Homo sapiens	RefSeq	NM_007181.3	ILMN_170122	MAP4K1	NM_001042600.1	NM_001042600.1		11184	110611907	NM_001042600.1	MAP4K1	NP_001036065.1	ILMN_1665943	0004590477	S	2533	GATGATCCTACTGCTCCCAGCAACCTCTACATCCAGGAATGAGTCCCTAG	19	-	43770219-43770227:43770228-43770268	19q13.2a	Homo sapiens mitogen-activated protein kinase kinase kinase kinase 1 (MAP4K1), transcript variant 1, mRNA.		Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase [goid 185] [pmid 11053428] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 8824585] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 8824585] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 8824585] [evidence TAS]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [pmid 11053428] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; Any process that modulates the frequency, rate or extent of hemocyte differentiation [goid 45610] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8824585] [evidence IDA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8824585] [evidence IDA]; Catalysis of the phosphorylation of serine and threonine residues in a mitogen-activated protein kinase kinase kinase (MAPKKK), resulting in activation of MAPKKK. MAPKKK signaling pathways relay, amplify and integrate signals from the plasma membrane to the nucleus in response to a diverse range of extracellular stimuli [goid 8349] [pmid 11053428] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	HPK1	HPK1
Homo sapiens	RefSeq	XM_936790.3	ILMN_40930	LOC645691	XM_936790.3	XM_936790.3		645691	169164889	XM_936790.3	LOC645691	XP_941883.1	ILMN_3279092	0005050491	M	270	GGTGGAGGCAGCTATGAATGCAAGGCCACAGAAGGTGGATGGAAGAGTCG				2q33.1e	PREDICTED: Homo sapiens similar to heterogeneous nuclear ribonucleoprotein A1 (LOC645691), mRNA.					
Homo sapiens	RefSeq	XM_931793.1	ILMN_44731	LOC643771	XM_931793.1	XM_931793.1		643771	88985519	XM_931793.1	LOC643771	XP_936886.1	ILMN_1656847	0004280372	S	74	AGCAAAGGAATAATCTGGTTATTAATTATGGTTTTAGACCCCATGACTGG	5	+	151576791-151576840		PREDICTED: Homo sapiens hypothetical protein LOC643771 (LOC643771), mRNA.					
Homo sapiens	RefSeq	NM_197964.1	ILMN_485	HSPC268	NM_197964.1	NM_197964.1		154791	37537547	NM_197964.1	HSPC268	NP_932068.1	ILMN_2078547	0001240576	S	631	TAAAAGTAGTACAAGCCTTAGCCAGGCACGGTGGCTCACGCCTGTAATCC	7	+	138681223-138681272	7q34b	Homo sapiens hypothetical protein HSPC268 (HSPC268), mRNA.					
Homo sapiens	RefSeq	NM_020248.2	ILMN_178971	CTNNBIP1	NM_020248.2	NM_020248.2		56998	59889553	NM_020248.2	CTNNBIP1	NP_064633.1	ILMN_2381168	0004610215	A	2331	TCATGAAGTGCACAGGAGCCAAATGACCGAGCCCTGGAGAGCCCCATGGT	1	-	9908948-9908997	1p36.22d	Homo sapiens catenin, beta interacting protein 1 (CTNNBIP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10898789] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10898789] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10898789] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10898789] [evidence TAS]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IEA]	MGC15093; ICAT	MGC15093; ICAT
Homo sapiens	RefSeq	NM_004801.2	ILMN_21937	NRXN1	NM_004801.3	NM_004801.3		9378	154330995	NM_004801.3	NRXN1	NP_004792.1	ILMN_1673152	0001980221	I	4721	GGGCCCAGCACAACCTGCCAAGAGGACTCATGTTCCAATCAAGGTGTGTG	2	-	50546154-50546203	2p16.3c-p16.3b	Homo sapiens neurexin 1 (NRXN1), transcript variant alpha, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1621094] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 1621094] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1621094] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11152476] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ35941; DKFZp313P2036; Hs.22998; KIAA0578	FLJ35941; DKFZp313P2036; Hs.22998; KIAA0578
Homo sapiens	RefSeq	XM_928041.1	ILMN_46214	LOC644964	XM_928041.1	XM_928041.1		644964	89050223	XM_928041.1	LOC644964	XP_933134.1	ILMN_1676118	0000870747	S	94	CTTAGAGAACCCAGTGACTTTTTGTACCTTAAATCTGTGAAATCCTCATG	19	-	193967-194016		PREDICTED: Homo sapiens hypothetical protein LOC644964 (LOC644964), mRNA.					
Homo sapiens	RefSeq	NR_003685.1	ILMN_345579	SNORD121A	NR_003685.1	NR_003685.1		100113379	154800498	NR_003685.1	SNORD121A		ILMN_3246715	0001940767	S	32	CCAAGCACATATCTGATGATTCCATGTGGAATTTAACTACCTGAGTTTCC	9	-	33952771-33952820	9p13.3d	Homo sapiens small nucleolar RNA, C/D box 121A (SNORD121A), small nucleolar RNA.					
Homo sapiens	RefSeq	NM_001202.2	ILMN_27187	BMP4	NM_001202.2	NM_001202.2		652	19528648	NM_001202.2	BMP4	NP_001193.1	ILMN_1709734	0004200491	I	175	ACGCCGCTGCTGCTCCGGCTGAGTATCTAGCTTGTCTCCCCGATGGGATT	14	-	53493138-53493187	14q22.2b	Homo sapiens bone morphogenetic protein 4 (BMP4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Branching of the ureteric bud [goid 1658] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [pmid 14749725] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7500] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IEA]; The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops [goid 21978] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [pmid 14749725] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell [goid 40007] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [pmid 14749725] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [pmid 14749725] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 11502704] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 14749725] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9804553] [evidence TAS]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 14749725] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	BMP2B1; BMP2B; ZYME	BMP2B1; BMP2B; ZYME
Homo sapiens	RefSeq	NM_001755.2	ILMN_3316	CBFB	NM_001755.2	NM_001755.2		865	47132615	NM_001755.2	CBFB	NP_001746.1	ILMN_1766408	0002600537	A	2590	GCTCACATGTTTACACACTCAGTGCCCTAATTTCCCCTGAGGGAATCGCT	16	+	65691916-65691965	16q22.1a	Homo sapiens core-binding factor, beta subunit (CBFB), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8351518] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9751756] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8351518] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 8351518] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12217689] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10856244] [evidence IPI]	PEBP2B	PEBP2B
Homo sapiens	RefSeq	XM_927822.1	ILMN_175699	LOC641765	XM_001129421.1	XM_001129421.1		641765	113418628	XM_001129421.1	LOC641765	XP_001129421.1	ILMN_1812049	0000540358	S	38	GGATGGAGATGCTGACAGATAAGAAATGGACCTGGGATGGTGCCAAGGCC	7	+	65614051-65614092:65615687-65615694	7q11.21e	PREDICTED: Homo sapiens similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain-containing protein 1) (Muscle TFII-I repeat domain-containing protein 1) (General transcription factor III) (Slow-muscle-fiber enhancer binding pro... (LOC641765), mRNA.					
Homo sapiens	RefSeq	NM_001009566.1	ILMN_29098	CLSTN1	NM_001009566.1	NM_001009566.1		22883	57242756	NM_001009566.1	CLSTN1	NP_001009566.1	ILMN_2415179	0001470184	A	4972	GACCCTGACTGCTAGTTCTGAGGACACTGGTGGCTGTGCTATGTGTGGCC	1	-	9790099-9790148	1p36.22d	Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CSTN1; PIK3CD; XB31alpha; KIAA0911; FLJ32258; alcalpha2; alcalpha1	CSTN1; PIK3CD; XB31alpha; KIAA0911; FLJ32258; alcalpha2; alcalpha1
Homo sapiens	RefSeq	XM_937951.1	ILMN_29098	CLSTN1	NM_001009566.1	NM_001009566.1		22883	57242756	NM_001009566.1	CLSTN1	NP_001009566.1	ILMN_1720181	0004880097	A	3240	CCAGCCACAGTTCGTGCACCCGGAACACCGCTCCTTTGTTGACCTGTCAG	1	-	9795996-9796045	1p36.22d	Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CSTN1; PIK3CD; XB31alpha; KIAA0911; FLJ32258; alcalpha2; alcalpha1	
Homo sapiens	RefSeq	NM_001009566.1	ILMN_29098	CLSTN1	NM_001009566.1	NM_001009566.1		22883	57242756	NM_001009566.1	CLSTN1	NP_001009566.1	ILMN_1717138	0004920440	A	3179	AGGTGGAGGTGAATGTAATCCACACGGCCAACCCCATGGAACACGCCAAC	1	-	9796057-9796100:9797556-9797561	1p36.22d	Homo sapiens calsyntenin 1 (CLSTN1), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CSTN1; PIK3CD; XB31alpha; KIAA0911; FLJ32258; alcalpha2; alcalpha1	CSTN1; PIK3CD; XB31alpha; KIAA0911; FLJ32258; alcalpha2; alcalpha1
Homo sapiens	RefSeq	XM_944612.1	ILMN_35477	LOC651341	XM_944612.1	XM_944612.1		651341	89037646	XM_944612.1	LOC651341	XP_949705.1	ILMN_1784340	0003190286	S	349	GGGTCTATGAGAACCAAATTCCAGCTTCAGCACATGGCCTTGGGTACAGC					PREDICTED: Homo sapiens hypothetical protein LOC651341 (LOC651341), mRNA.					
Homo sapiens	RefSeq	XM_931990.1	ILMN_41973	LOC644058	XM_943592.2	XM_943592.2		644058	113417891	XM_943592.2	LOC644058	XP_948685.1	ILMN_1670166	0000060181	S	7	ATAAATGAAAGCCACTGTCTTCCTAGAGCAGGCATGTTTGGTAGCTGGAA				6p24.3c	PREDICTED: Homo sapiens hCG2045048 (LOC644058), mRNA.					
Homo sapiens	RefSeq	NM_005184.2	ILMN_3508	CALM3	NM_005184.2	NM_005184.2		808	58218967	NM_005184.2	CALM3	NP_005175.2	ILMN_1666385	0002750184	S	2100	CAGCCAAGAGCTGAGGGTAAGGGCAGGTAGGCGTGAGGCTGTGGACATTT	19	+	47113880-47113929	19q13.32b	Homo sapiens calmodulin 3 (phosphorylase kinase, delta) (CALM3), mRNA.				PHKD; PHKD3	PHKD; PHKD3
Homo sapiens	RefSeq	NM_022476.2	ILMN_9667	AKTIP	NM_022476.2	NM_022476.2		64400	61743931	NM_022476.2	AKTIP	NP_071921.1	ILMN_1665982	0005720703	A	1431	ATGTTAGGAAATGGAGAGGTATAGAGAGAGCAGGTTCCATAGCTCAGCAC	16	-	53525904-53525953	16q12.2a	Homo sapiens AKT interacting protein (AKTIP), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14749367] [evidence IDA]	Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [pmid 14749367] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein binding [goid 32092] [pmid 14749367] [evidence IDA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14749367] [evidence IPI]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	FTS; FT1	FTS; FT1
Homo sapiens	RefSeq	XM_938772.1	ILMN_39667	LOC649702	XM_938772.1	XM_938772.1		649702	88952871	XM_938772.1	LOC649702	XP_943865.1	ILMN_1790459	0006370609	S	310	GAACGAGACTTGGGGACATCCTACCACCAACAGCAATTGGGTGCGCAGTC					PREDICTED: Homo sapiens similar to butyrophilin related 1 (LOC649702), mRNA.					
Homo sapiens	RefSeq	NM_016568.1	ILMN_12729	RXFP3	NM_016568.2	NM_016568.2		51289	141802857	NM_016568.2	RXFP3	NP_057652.1	ILMN_1731621	0003460189	S	1576	ATCGCGTCTCCTTCGATCACCAGCATGCGCCCCTTCACCGCCACTACCAA	5	+	33938066-33938115	5p13.3a	Homo sapiens relaxin/insulin-like family peptide receptor 3 (RXFP3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10806363] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10806363] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an N-formyl peptide to initiate a change in cell activity [goid 4982] [evidence IEA]	GPCR135; SALPR; MGC141998; MGC142000; RLN3R1	GPCR135; SALPR; MGC141998; MGC142000; RLN3R1
Homo sapiens	RefSeq	XR_040489.1	ILMN_341399	LOC729652	XR_040489.1	XR_040489.1		729652	169209610	XR_040489.1	LOC729652		ILMN_3300891	0001230349	M	2742	CCCAAGTGCTGGGATTACAGGCGTGAGCCACCACACCCGGCCCACTTATA				16p13.3d	PREDICTED: Homo sapiens hypothetical protein LOC729652 (LOC729652), miscRNA.					
Homo sapiens	RefSeq	NM_001014796.1	ILMN_21519	DDR2	NM_001014796.1	NM_001014796.1		4921	62420885	NM_001014796.1	DDR2	NP_001014796.1	ILMN_1675794	0004920725	I	385	TGTAGCCTCATTTCTGTGGAGACCTTTGGCTGGACTCTCCTGGCTCTCCC	1	+	160941492-160941541	1q23.3c	Homo sapiens discoidin domain receptor tyrosine kinase 2 (DDR2), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9659899] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9659899] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9659899] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 9659899] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NTRKR3; MIG20a; TYRO10; TKT	NTRKR3; MIG20a; TYRO10; TKT
Homo sapiens	RefSeq	XR_037721.1	ILMN_335950	LOC387791	XR_037721.1	XR_037721.1		387791	169203004	XR_037721.1	LOC387791		ILMN_3200322	0006550672	A	429	GGAGAGAGCTGGGTTTTCCAAGTTACCTGACCTTAAAGATGCTGACGCTG				11q14.1a	PREDICTED: Homo sapiens misc_RNA (LOC387791), miscRNA.					
Homo sapiens	RefSeq	XM_929995.1	ILMN_168061	LOC647011	XM_001128455.1	XM_001128455.1		647011	113427946	XM_001128455.1	LOC647011	XP_001128455.1	ILMN_1716349	0003990735	S	892	GTTGGCCACAACAATAAGGGGGGCTCTGCAGGTTGGTTCCTGTCCCAGAT				18q21.1a-q21.1b	PREDICTED: Homo sapiens similar to lipoxygenase homology domains 1 (LOC647011), mRNA.					
Homo sapiens	RefSeq	NM_017835.1	ILMN_12103	C21ORF59	NM_017835.1	NM_017835.1		56683	8923436	NM_017835.1	C21orf59	NP_060305.1	ILMN_1764329	0002320324	I	163	TTGCTCTTGGCAACATCCACTTCCGGGAGCGAGTGCCGTTTCCCCCGCTC	21	-	32906572-32906621	21q22.11b	Homo sapiens chromosome 21 open reading frame 59 (C21orf59), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]			FLJ37137; FLJ20467; FLJ40247; C21orf48	FLJ37137; FLJ20467; FLJ40247; C21orf48
Homo sapiens	RefSeq	XM_379194.2	ILMN_38494	LOC401068	XM_379194.3	XM_379194.3		401068	113414514	XM_379194.3	LOC401068	XP_379194.3	ILMN_1668672	0005080296	S	247	CCCCGAGCGGAACGGCCCGGAAGAGGAGACGCGTCCCCGGGAACCCAGTG	3	+	53055428-53055477	3p21.1c	PREDICTED: Homo sapiens hypothetical LOC401068 (LOC401068), mRNA.					
Homo sapiens	RefSeq	NM_000425.2	ILMN_181890	L1CAM	NM_000425.2	NM_000425.2		3897	13435354	NM_000425.2	L1CAM	NP_000416.1	ILMN_1739238	0001230735	A	4418	GCTCCATACACACGCTGCCTTCGGTACCCACCACACAACATCCAAGTGGC	X	-	152780638-152780687	Xq28f	Homo sapiens L1 cell adhesion molecule (L1CAM), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7920659] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 1769655] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CAML1; S10; CD171; MIC5; HSAS1; SPG1; HSAS; MASA; N-CAML1	CAML1; S10; CD171; MIC5; HSAS1; SPG1; HSAS; MASA; N-CAML1
Homo sapiens	RefSeq	XM_001714250.1	ILMN_344036	LOC100133265	XM_001714250.1	XM_001714250.1		100133265	169184676	XM_001714250.1	LOC100133265	XP_001714302.1	ILMN_3242837	0004540521	S	63	GTGCCATCGTAAAGAACTGTTCACTGCGGTAAATAGCCACTATGGAGACT	10	-	48938043-48938070:48942352-48942373	10q11.22c	PREDICTED: Homo sapiens similar to hCG2039934 (LOC100133265), mRNA.					
Homo sapiens	Unigene	Hs.489952	ILMN_96378	HS.489952	Hs.489952		Hs.489952		45367097	CK905566			ILMN_1873967	0004490468	S	454	ATGCAGAACAGCTCTCCTTCCTCCACAGCTGCAGGGGAGCGGCAACACAT	7	-	128298830-128298879		ih26e02.x5 Human insulinoma Homo sapiens cDNA clone IMAGE:5615330 3, mRNA sequence					
Homo sapiens	Unigene	Hs.578836	ILMN_131017	HS.578836	Hs.578836		Hs.578836		83154597	DB338885			ILMN_1892161	0004220315	S	379	GAGCTTTCATTAGCTGAGTCTTCATTGGCTGAGTCCTCCTGGGCTGAGGG	16	+	25342857-25342906		DB338885 TESTI2 Homo sapiens cDNA clone TESTI2046701 3, mRNA sequence					
Homo sapiens	RefSeq	NR_002988.1	ILMN_176787	SNORA74B	NR_002988.1	NR_002988.1		677841	91680854	NR_002988.1	SNORA74B		ILMN_3246935	0003170598	S	129	GACAGAGCTGTGCTTCCCCGAGAGTGTGCTAAGCATTCACTTTGGCTGCT	5	+	172380463-172380512	5q35.2a	Homo sapiens small nucleolar RNA, H/ACA box 74B (SNORA74B), small nucleolar RNA.				U19-2	U19-2
Homo sapiens	RefSeq	XM_943962.1	ILMN_32773	LOC648103	XM_943962.1	XM_943962.1		648103	88988297	XM_943962.1	LOC648103	XP_949055.1	ILMN_1767236	0003390475	A	62	AGGGGGCCAAGAAGAAAGTGACAATGATTGAAGCTCACGTTGATGTCAGG					PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 2 (LOC648103), mRNA.					
Homo sapiens	RefSeq	NM_002800.4	ILMN_12611	PSMB9	NM_002800.4	NM_002800.4		5698	73747923	NM_002800.4	PSMB9	NP_002791.1	ILMN_2376108	0001940180	A	224	ACAAGCTGTCCCCGCTGCACGAGCGCATCTACTGTGCACTCTCTGGTTCA	6	+	32825066-32825115	6p21.32a	Homo sapiens proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) (PSMB9), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC70470; PSMB6i; beta1i; LMP2; RING12	MGC70470; PSMB6i; beta1i; LMP2; RING12
Homo sapiens	RefSeq	NM_002800.4	ILMN_12611	PSMB9	NM_002800.4	NM_002800.4		5698	73747923	NM_002800.4	PSMB9	NP_002791.1	ILMN_1798233	0006450692	A	797	TGGGAAATGAGTGCTCAGGGAGATGGAGCTTAGGGGAGGTGGGTGCTTCC	6	+	32827377-32827426	6p21.32a	Homo sapiens proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) (PSMB9), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC70470; PSMB6i; beta1i; LMP2; RING12	MGC70470; PSMB6i; beta1i; LMP2; RING12
Homo sapiens	RefSeq	XM_937109.1	ILMN_40578	LOC648059	XM_937109.1	XM_937109.1		648059	89039182	XM_937109.1	LOC648059	XP_942202.1	ILMN_1768392	0000770414	S	1889	CCTCTGTTGAGTTTCCATTTCAGATTGTGGCCAGGCATGGTGGCTCATGC					PREDICTED: Homo sapiens hypothetical protein LOC648059 (LOC648059), mRNA.					
Homo sapiens	RefSeq	NM_005407.1	ILMN_13166	SALL2	NM_005407.1	NM_005407.1		6297	49087131	NM_005407.1	SALL2	NP_005398.1	ILMN_1740842	0004880554	S	4669	CAGCTCCAGGTGGCGTCCTCCCTGCCTCTCCGTCTTGTAATGAGTTGTAG	14	-	21989425-21989474	14q11.2d	Homo sapiens sal-like 2 (Drosophila) (SALL2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ10414; KIAA0360; HSAL2; ZNF795; p150(Sal2)	FLJ10414; KIAA0360; ZNF795; HSAL2; p150(Sal2)
Homo sapiens	RefSeq	NM_001033507.1	ILMN_29104	LMX1A	NM_001033507.1	NM_001033507.1		4009	75677380	NM_001033507.1	LMX1A	NP_001028679.1	ILMN_1705678	0004280768	I	348	CAACACCCATTCCTGGAGGCGAGTGGAGAAGTTGTTATTATCCCTATGTC	1	-	165176767-165176816	1q23.3e	Homo sapiens LIM homeobox transcription factor 1, alpha (LMX1A), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC87616; LMX-1; LMX1.1; LMX1	MGC87616; LMX-1; LMX1.1; LMX1
Homo sapiens	RefSeq	NM_012222.2	ILMN_164470	MUTYH	NM_012222.2	NM_012222.2		4595	115298646	NM_012222.2	MUTYH	NP_036354.1	ILMN_2336970	0000290026	A	1442	CAGAGCAGCTTCAGCGCAAGGCCCTGCTGCAGGAACTACAGCGTTGGGCT	1	-	45797130-45797179	1p34.1c	Homo sapiens mutY homolog (E. coli) (MUTYH), transcript variant alpha1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7823963] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10583946] [evidence EXP]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 7823963] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The disruption of the bond between the sugar in the backbone and the A or G base, causing the base to be removed and leaving a depurinated sugar [goid 45007] [pmid 10583946] [evidence EXP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11801590] [evidence IPI]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the removal of damaged bases by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site [goid 19104] [pmid 10583946] [evidence EXP]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [pmid 11801590] [evidence IDA]; Interacting selectively with the mismatch repair complex MutLbeta [goid 32406] [pmid 11801590] [evidence IDA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [pmid 11801590] [evidence IDA]; Interacting selectively with the mismatch repair complex MutSbeta [goid 32408] [pmid 11801590] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	MGC4416; MYH	MGC4416; MYH
Homo sapiens	RefSeq	XM_942149.1	ILMN_42505	LOC652614	XM_942149.1	XM_942149.1		652614	89063264	XM_942149.1	LOC652614	XP_947242.1	ILMN_2140008	0005550382	S	974	TTGGCCTGGTTCTCCTCGTAGTAGCTCTGGTGGCTGGAGCTGTGATCTGG					PREDICTED: Homo sapiens similar to MHC class I antigen (LOC652614), mRNA.					
Homo sapiens	Unigene	Hs.542934	ILMN_106625	HS.542934	Hs.542934		Hs.542934		34526645	AK129941			ILMN_1885583	0001030243	S	3042	TCTCCACCTGGGGGAAGTTTACTTTGTTGGCTTTTTATGCAGAGGGCCAC	3	-	147250397-147250446		Homo sapiens cDNA FLJ26431 fis, clone KDN01390					
Homo sapiens	RefSeq	NM_001040619.1	ILMN_182693	ATF3	NM_001040619.1	NM_001040619.1		467	95102482	NM_001040619.1	ATF3	NP_001035709.1	ILMN_2374865	0004780128	A	1826	CTCCCAGCGTTAACACAAAATCCATGGGCAGTATGATGGCAGGTCCTCTG	1	+	210860205-210860254	1q32.3c	Homo sapiens activating transcription factor 3 (ATF3), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7515060] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 7515060] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18255255] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]		
Homo sapiens	RefSeq	NM_004024.3	ILMN_182693	ATF3	NM_001040619.1	NM_001040619.1		467	95102482	NM_001040619.1	ATF3	NP_001035709.1	ILMN_1791346	0006560575	I	732	CCGCCTCTGTGGCATCACCAGGGTTTCTCTGAAGAAGAGGGTCTGCATTT	1	+	210859111-210859160	1q32.3c	Homo sapiens activating transcription factor 3 (ATF3), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7515060] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 7515060] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18255255] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]		
Homo sapiens	RefSeq	NM_001020658.1	ILMN_169279	PUM1	NM_001020658.1	NM_001020658.1		9698	66932908	NM_001020658.1	PUM1	NP_001018494.1	ILMN_2401155	0001690500	A	3772	CTGAGACGGGCAAGTGGTTGCTCCAGGATTACTCCCTCCTCCAAAAAAGG	1	-	31405916-31405965	1p35.2a	Homo sapiens pumilio homolog 1 (Drosophila) (PUM1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	HSPUM; PUMH; PUML1; PUMH1; KIAA0099	HSPUM; PUMH; PUML1; PUMH1; KIAA0099
Homo sapiens	RefSeq	NM_198207.1	ILMN_17403	LASS1	NM_198207.2	NM_198207.2		10715	110349724	NM_198207.2	LASS1	NP_937850.1	ILMN_1673232	0003840204	I	1765	CGGGTGTGCAGTGTCTCATAGGCAACGTGAGGAGTGTTTGAGCAGGAGCC	19	-	18989006-18989055	19p13.11b	Homo sapiens LAG1 homolog, ceramide synthase 1 (LASS1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine. In S. cerevisiae, either dihydrosphingosine (DHS) or phytosphingosine (PHS) can react with C26-fattyacyl-CoA to produce ceramide-I or ceramide-II (also called phytoceramide) respectively. In mammals, DHS is usually acylated with a C18 fatty acid group [goid 50291] [evidence ISS]	UOG1; LAG1; MGC90349; CerS1	UOG1; LAG1; MGC90349
Homo sapiens	RefSeq	NM_024662.1	ILMN_13298	NAT10	NM_024662.1	NM_024662.1		55226	13399321	NM_024662.1	NAT10	NP_078938.1	ILMN_1705594	0001170554	S	3804	GTGCTGTTCCACTCTTGGCTCCAGCAGACCCACTGTCCCAGAAAAGCCTG	11	+	34124835-34124884	11p13c	Homo sapiens N-acetyltransferase 10 (GCN5-related) (NAT10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11214970] [evidence NAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ10774; FLJ23850; DKFZp434C116; KIAA1709; hALP; ALP; FLJ12179	FLJ10774; FLJ12179; FLJ23850; DKFZp434C116; KIAA1709; hALP; ALP
Homo sapiens	RefSeq	NM_014394.1	ILMN_181779	GHITM	NM_014394.2	NM_014394.2		27069	118200355	NM_014394.2	GHITM	NP_055209.2	ILMN_1728467	0004850754	S	1827	GAAACAGGCACAGGTGATGCATTCTCCTGCTGTTGCTTCTCAGTGCTCTC	10	+	85902336-85902385	10q23.1c	Homo sapiens growth hormone inducible transmembrane protein (GHITM), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ26584; My021; DERP2; PTD010; HSPC282; TMBIM5; DKFZp566C0746	My021; DERP2; PTD010; HSPC282; DKFZp566C0746; TMBIM5
Homo sapiens	RefSeq	NM_001035518.1	ILMN_11102	CEP250	NM_001035518.1	NM_001035518.1		11190	80861457	NM_001035518.1	CEP250	NP_001030595.1	ILMN_2392940	0002320307	A	7816	AAGCCGCCTCCAGGTAGCAGCCACAGCCAGGAGCACACAGACAGAAGACT	20	+	33562853-33562869:33562870-33562902	20q11.22b	Homo sapiens centrosomal protein 250kDa (CEP250), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 9647649] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	Progression through the phases of the mitotic cell cycle, the most common eukaryotic cell cycle, which canonically comprises four successive phases called G1, S, G2, and M and includes replication of the genome and the subsequent segregation of chromosomes into daughter cells. In some variant cell cycles nuclear replication or nuclear division may not be followed by cell division, or G1 and G2 phases may be absent [goid 278] [pmid 12140259] [evidence IDA]; Any process that modulates the extent to which the two centrioles within a centrosome remain tightly paired; may be mediated by the assembly and disassembly of a proteinaceous linker [goid 30997] [pmid 9647649] [evidence IDA]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9647649] [evidence IPI]	CEP2; C-NAP1; MGC88542	CEP2; C-NAP1; MGC88542
Homo sapiens	RefSeq	NM_033007.3	ILMN_28628	NLRP1	NM_033007.3	NM_033007.3		22861	119393882	NM_033007.3	NLRP1	NP_127500.1	ILMN_2313079	0003800136	A	4200	AGTCACCTTCCACCTCTACCTGATCCCAAGTGACTGCTCCATTCGGAAGG	17	-	5428292-5428341	17p13.2b	Homo sapiens NLR family, pyrin domain containing 1 (NLRP1), transcript variant 4, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11076957] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11076957] [evidence NAS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 11076957] [evidence NAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The process of apoptosis in neurons, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system [goid 51402] [pmid 15212762] [evidence IDA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 15212762] [evidence IDA]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [pmid 11076957] [evidence NAS]; Interacting selectively with any enzyme [goid 19899] [pmid 11076957] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	NAC; CARD7; NALP1; PP1044; KIAA0926; DKFZp586O1822; VAMAS1; SLEV1; DEFCAP; CLR17.1; DEFCAP-L/S	NAC; CARD7; NALP1; SLEV1; PP1044; KIAA0926; DKFZp586O1822; VAMAS1; DEFCAP; CLR17.1; DEFCAP-L/S
Homo sapiens	RefSeq	NM_030627.1	ILMN_5007	CPEB4	NM_030627.1	NM_030627.1		80315	32698754	NM_030627.1	CPEB4	NP_085130.1	ILMN_1722025	0001500131	S	4555	ACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGTCAGGG	5	+	173317563-173317612	5q35.2a-q35.2b	Homo sapiens cytoplasmic polyadenylation element binding protein 4 (CPEB4), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	KIAA1673	KIAA1673
Homo sapiens	RefSeq	XM_938662.1	ILMN_34536	LOC121792	XM_938662.1	XM_938662.1		121792	89037175	XM_938662.1	LOC121792	XP_943755.1	ILMN_1680101	0001660408	S	4	CTCGTGTGGGGGCAGCGGCTTCCAAGGGAAGGCGTCAGCAATGGAGAGCA				13q34b	PREDICTED: Homo sapiens similar to futsch CG3064-PB (LOC121792), mRNA.					
Homo sapiens	RefSeq	NM_024917.4	ILMN_181255	TRMT2B	NM_024917.4	NM_024917.4		79979	40255252	NM_024917.4	TRMT2B	NP_079193.2	ILMN_2041971	0002750059	S	2716	GCGTGAGCCACCACACCCCGCCGCGGCTGACTTAACCTTAGATTTCAGAT	X	-	100265090-100265139	Xq22.1c	Homo sapiens TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae) (TRMT2B), mRNA.				dJ341D10.3; FLJ12687	dJ341D10.3; FLJ12687
Homo sapiens	RefSeq	NM_015684.2	ILMN_26667	ATP5S	NM_015684.2	NM_015684.2		27109	51558767	NM_015684.2	ATP5S	NP_056499.2	ILMN_2299843	0006900722	A	963	CACCTTCCAACAGGCCCTCTGGACAAATACAAGATTCAGGCGATCGACGC	14	+	49859097-49859146	14q22.1b	Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) (ATP5S), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 6143319] [evidence NAS]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [pmid 6143319] [evidence NAS]	ATPW; HSU79253	ATPW; HSU79253
Homo sapiens	RefSeq	NM_001219.2	ILMN_24697	CALU	NM_001219.2	NM_001219.2		813	6005991	NM_001219.2	CALU	NP_001210.1	ILMN_1727194	0000940431	S	2978	GAACTGTGTGGCAAGAGAGCCTCACACCTCACTAGGTGCAGAGAGCCCAG	7	+	128198425-128198474	7q32.1a	Homo sapiens calumenin (CALU), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9218460] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9218460] [evidence TAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10094503] [evidence IDA]	FLJ90608	FLJ90608
Homo sapiens	RefSeq	NM_024924.3	ILMN_307735	ZNF702P	NR_003578.1	NR_003578.1		79986	149999363	NR_003578.1	ZNF702P		ILMN_1663281	0003870707	S	2526	GAGAGCAGCCTGGCCAACAGAGGTGAGCACCTTTCCCAGTCTGTTTTTTG	19	-	58163737-58163786	19q13.41a	Homo sapiens zinc finger protein 702 (pseudogene) (ZNF702P), non-coding RNA.				FLJ12985	FLJ12985
Homo sapiens	RefSeq	NM_181079.1	ILMN_12724	IL21R	NM_181079.1	NM_181079.1		50615	31083179	NM_181079.1	IL21R	NP_851565.1	ILMN_1661687	0002000474	I	62	GTGACCCCATGAGCTGTCGCTGCATCTTTCTCATGAAGCACGGGGAACGG	16	+	27321985-27322034	16p12.1a	Homo sapiens interleukin 21 receptor (IL21R), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11081504] [evidence NAS]	The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [pmid 11081504] [evidence NAS]	Combining with interleukin-21 to initiate a change in cell activity [goid 1532] [pmid 11081504] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NILR; MGC10967	NILR; MGC10967
Homo sapiens	RefSeq	XM_496379.2	ILMN_180422	LOC401957	XM_496379.2	XM_496379.2		401957	88942932	XM_496379.2	LOC401957	XP_496379.2	ILMN_1659602	0002490136	S	154	CTTGGTCATGGTCCTGACCCTTTACAAGAGAGATCTCTCTTTGAGAAAAA	1	+	106236649-106236698	1p21.1a	PREDICTED: Homo sapiens similar to Matrin-3 (Nuclear scaffold protein P130/MAT3) (LOC401957), mRNA.					
Homo sapiens	RefSeq	XM_929520.1	ILMN_43896	LOC646584	XM_929520.1	XM_929520.1		646584	89059518	XM_929520.1	LOC646584	XP_934613.1	ILMN_1656280	0006860243	S	561	TCTGGTGGCAGAGCCTTTGGGAAGCATCAGAGTTGAGGTTGCAGCATGCC	X	+	36651160-36651190:36651932-36651950	Xp21.1a	PREDICTED: Homo sapiens similar to testis-specific histone 2a (LOC646584), mRNA.					
Homo sapiens	RefSeq	NM_016433.3	ILMN_30280	GLTP	NM_016433.3	NM_016433.3		51228	53832029	NM_016433.3	GLTP	NP_057517.1	ILMN_1764380	0004490017	S	2161	CGCCTCACTGCCTTAACCTTAACTGTTCTTCCTGGCGCTAAAAAGAGCTG	12	-	110288893-110288942	12q24.11b	Homo sapiens glycolipid transfer protein (GLTP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 15901739] [evidence IC ]	The directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 46836] [pmid 15901739] [evidence IDA]	Enables the directed movement of glycolipids, compounds containing (usually) 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid, into, out of, within or between cells [goid 17089] [pmid 15901739] [evidence IDA]; Interacting selectively with a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic moiety such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate [goid 51861] [pmid 15287756] [evidence IDA]; Interacting selectively with a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic moiety such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate [goid 51861] [pmid 15901739] [evidence IDA]		
Homo sapiens	RefSeq	NR_024248.1	ILMN_370482	LOC650368	NR_024248.1	NR_024248.1		650368	209954643	NR_024248.1	LOC650368		ILMN_3238977	0001710722	S	871	TTCACAGATCCACCGCTGAGGAGGAAACAGTGCAGAGCGAGCTGCCCACA	11	+	3427878-3427927	11p15.4d	Homo sapiens asparagine-linked glycosylation 1 homolog pseudogene (LOC650368), non-coding RNA. XR_037148 XR_037345					
Homo sapiens	RefSeq	NM_000918.2	ILMN_27535	P4HB	NM_000918.3	NM_000918.3		5034	121256637	NM_000918.3	P4HB	NP_000909.2	ILMN_1719303	0002850333	S	2404	TCTCTACAGCACGGCCTGTGGCCTGTTCAAGGCAGAACCACGACCCTTGA	17	-	79801158-79801207	17q25.3g	Homo sapiens prolyl 4-hydroxylase, beta polypeptide (P4HB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 3034602] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The posttranslational modification of peptidyl-proline to form 4-hydroxy-L-proline; catalyzed by procollagen-proline,2-oxoglutarate-4-dioxygenase [goid 18401] [pmid 7753822] [evidence IDA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [pmid 2846539] [evidence TAS]; Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2 [goid 4656] [pmid 7753822] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17055437] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	GIT; DSI; PO4HB; PDIA1; PROHB; PDI; PHDB; ERBA2L; PO4DB	PO4HB; PDIA1; PROHB; PDI; ERBA2L; GIT; DSI; PO4DB
Homo sapiens	RefSeq	NM_015596.1	ILMN_14934	KLK13	NM_015596.1	NM_015596.1		26085	11496280	NM_015596.1	KLK13	NP_056411.1	ILMN_1666191	0000940327	S	1119	GGCCCAGGTCTCTCAACTTCATCAGTGTGGCTTCTATGAGCCCAGATCAC	19	-	56251364-56251413	19q13.33d	Homo sapiens kallikrein-related peptidase 13 (KLK13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10766816] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12642628] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10766816] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 10766816] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14687906] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	KLK-L4; DKFZP586J1923; KLKL4	KLK-L4; DKFZP586J1923; KLKL4
Homo sapiens	RefSeq	NM_015603.1	ILMN_5456	CCDC9	NM_015603.1	NM_015603.1		26093	7661689	NM_015603.1	CCDC9	NP_056418.1	ILMN_1719190	0004390255	S	1641	GTGTCCGATTGGGGTGAAGAGGTGGAGCTGAATTCTCCCCGGACCACTCA	19	+	52466674-52466723	19q13.32b	Homo sapiens coiled-coil domain containing 9 (CCDC9), mRNA.				DKFZP586M1019	DKFZP586M1019
Homo sapiens	RefSeq	NM_004813.1	ILMN_20453	PEX16	NM_004813.1	NM_004813.1		9409	4758897	NM_004813.1	PEX16	NP_004804.1	ILMN_1745655	0006580608	A	1064	CTGCGGCGCCGGACCATCCTGCTGCTCTACTACCTGCTGCGCTCTCCTTT	11	-	45891963-45892012	11p11.2c	Homo sapiens peroxisomal biogenesis factor 16 (PEX16), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 15813749] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 9837814] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 12223482] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 16717127] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	The assembly and arrangement of the membrane of a peroxisome [goid 16557] [pmid 12223482] [evidence IMP]; The assembly and arrangement of the membrane of a peroxisome [goid 16557] [pmid 9837814] [evidence IMP]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 9922452] [evidence IMP]; The de novo formation of peroxisomes from the endoplasmic reticulum [goid 32581] [pmid 16717127] [evidence IDA]; The targeting of proteins into the peroxisomal membrane. The process is not well understood, but both signals and mechanism differ from those involved in peroxisomal matrix protein import [goid 45046] [pmid 12223482] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 15713480] [evidence IPI]		
Homo sapiens	RefSeq	NM_004813.1	ILMN_20453	PEX16	NM_004813.1	NM_004813.1		9409	4758897	NM_004813.1	PEX16	NP_004804.1	ILMN_1701466	0001110072	I	1218	CCACCTGGCAGAAAATCTACTTCTACAGTTGGGGCTGACAGACCTCCCGG	11	-	45888368-45888380:45888381-45888417	11p11.2c	Homo sapiens peroxisomal biogenesis factor 16 (PEX16), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 15813749] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 9837814] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 12223482] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 16717127] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]	The assembly and arrangement of the membrane of a peroxisome [goid 16557] [pmid 12223482] [evidence IMP]; The assembly and arrangement of the membrane of a peroxisome [goid 16557] [pmid 9837814] [evidence IMP]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 9922452] [evidence IMP]; The de novo formation of peroxisomes from the endoplasmic reticulum [goid 32581] [pmid 16717127] [evidence IDA]; The targeting of proteins into the peroxisomal membrane. The process is not well understood, but both signals and mechanism differ from those involved in peroxisomal matrix protein import [goid 45046] [pmid 12223482] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 15713480] [evidence IPI]		
Homo sapiens	RefSeq	NM_001042377.1	ILMN_177357	INS-IGF2	NM_001042377.1	NM_001042377.1		723961	109148523	NM_001042377.1	INS-IGF2	NP_001035836.1	ILMN_2328463	0007320575	A	599	GCCCAGTCCTGAGGTGAGCTGCTGTGGCCTGTGGCCCAGGCGACCCCAGC				11p15.5a	Homo sapiens insulin- insulin-like growth factor 2 (INS-IGF2), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_001042377.1	ILMN_177357	INS-IGF2	NM_001042377.1	NM_001042377.1		723961	109148523	NM_001042377.1	INS-IGF2	NP_001035836.1	ILMN_2250521	0003290605	I	5084	TTTAACCTTGTAACGCTTGCAATCCCAATAAAGCATTAAAAGTCAAAAAA				11p15.5a	Homo sapiens insulin- insulin-like growth factor 2 (INS-IGF2), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_002349.1	ILMN_10946	LY75	NM_002349.1	NM_002349.1		4065	4505052	NM_002349.1	LY75	NP_002340.1	ILMN_1757011	0000430215	S	6811	CACTAAGACTTTCCTCCAAGAACTAAGCCAACTTGATGTGAAAAGCACGG	2	-	160368163-160368212	2q24.2a	Homo sapiens lymphocyte antigen 75 (LY75), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9553150] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9553150] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9553150] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9553150] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLEC13B; CD205; GP200-MR6; DEC-205	CLEC13B; CD205; GP200-MR6; DEC-205
Homo sapiens	RefSeq	NM_006552.1	ILMN_23210	SCGB1D1	NM_006552.1	NM_006552.1		10648	5729906	NM_006552.1	SCGB1D1	NP_006543.1	ILMN_1781656	0006940376	S	5	CTCATCATTGGTTAAAGCCGAGCTCACAGCAGAATAAGCCACCATGAGGC	11	+	61714290-61714332:61714333-61714339	11q12.3a	Homo sapiens secretoglobin, family 1D, member 1 (SCGB1D1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10066439] [evidence TAS]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	LIPA; LPHA; MGC71958	LIPA; LPHA; MGC71958
Homo sapiens	RefSeq	NM_203379.1	ILMN_6029	ACSL5	NM_203379.1	NM_203379.1		51703	42794757	NM_203379.1	ACSL5	NP_976313.1	ILMN_2273911	0002320332	I	41	GGTGCTGAATCAATACAGCCAGCTGTGAGGGGAGCACTTCCTGGACCCAG	10	+	114123946-114123995	10q25.2b	Homo sapiens acyl-CoA synthetase long-chain family member 5 (ACSL5), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	ACS2; FACL5; ACS5	ACS2; FACL5; ACS5
Homo sapiens	RefSeq	NM_203379.1	ILMN_6029	ACSL5	NM_203379.1	NM_203379.1		51703	42794757	NM_203379.1	ACSL5	NP_976313.1	ILMN_2370882	0000620577	A	2503	TTAGTAACCACAAGTTCAAGGGTCAAAGGGACCCTCTGTGCCTTCTTCTT	10	+	114171377-114171413:114171660-114171672	10q25.2b	Homo sapiens acyl-CoA synthetase long-chain family member 5 (ACSL5), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	ACS2; FACL5; ACS5	ACS2; FACL5; ACS5
Homo sapiens	RefSeq	NM_052840.3	ILMN_21527	BRUNOL6	NM_052840.3	NM_052840.3		60677	70780380	NM_052840.3	BRUNOL6	NP_443072.3	ILMN_1656045	0007040296	S	3254	AGCTGTGTGGGGTCCCTCTAATCCCCAGATGTTGCTGAGGCTGAAGGCCT	15	-	70364218-70364267	15q23b	Homo sapiens bruno-like 6, RNA binding protein (Drosophila) (BRUNOL6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CELF6	CELF6
Homo sapiens	RefSeq	XR_037091.1	ILMN_340077	LOC285634	XR_037091.1	XR_037091.1		285634	169167809	XR_037091.1	LOC285634		ILMN_3281845	0004260170	M	1551	TGAAGACCGTGCCTCCCTACTATCTCGGGCCCTTCAAGAAAGCTGTTAGT				5p13.1c	PREDICTED: Homo sapiens misc_RNA (LOC285634), miscRNA.					
Homo sapiens	RefSeq	NM_005291.1	ILMN_21655	GPR17	NM_005291.1	NM_005291.1		2840	4885300	NM_005291.1	GPR17	NP_005282.1	ILMN_1668779	0006560543	S	1680	ACTGCCTGAGTTGAAGAGACACAGGCCACACATTTCAGGCTGGTTGCCAG	2	+	128126301-128126350	2q14.3e	Homo sapiens G protein-coupled receptor 17 (GPR17), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8558062] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8558062] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with chemokines, small chemoattractant molecules normally used to stimulate leukocytes, to initiate a change in cell activity [goid 4950] [pmid 8558062] [evidence TAS]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	DKFZp686M18273	DKFZp686M18273
Homo sapiens	RefSeq	NM_032645.3	ILMN_965	RAPSN	NM_005055.3	NM_005055.3		5913	38045929	NM_005055.3	RAPSN	NP_005046.2	ILMN_1724806	0004780370	A	1479	TCCTCGCCACTCCTGCTCTTTCTCCACTGCACGCCAGAGGCCCATTTACT	11	-	47459450-47459499	11p11.2b	Homo sapiens receptor-associated protein of the synapse (RAPSN), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8812503] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an acetylcholine receptor [goid 33130] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC3597; RNF205; CMS1E; CMS1D	MGC3597; RNF205; CMS1E; CMS1D
Homo sapiens	RefSeq	NM_005055.3	ILMN_965	RAPSN	NM_005055.3	NM_005055.3		5913	38045929	NM_005055.3	RAPSN	NP_005046.2	ILMN_1803303	0006370035	I	1094	AAGTGCTGGGTGGCCAGGAAGGCGCTGGACAAGGCTCTGGATGCCATCGA	11	-	47462746-47462763:47463163-47463194	11p11.2b	Homo sapiens receptor-associated protein of the synapse (RAPSN), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8812503] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an acetylcholine receptor [goid 33130] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC3597; RNF205; CMS1E; CMS1D	MGC3597; RNF205; CMS1E; CMS1D
Homo sapiens	RefSeq	NM_001089584.1	ILMN_309361	C5ORF49	NM_001089584.1	NM_001089584.1		134121	148237104	NM_001089584.1	C5orf49	NP_001083053.1	ILMN_3246356	0004760609	S	958	GGGGAGGCAGTCACAGGAGTGAGGTGCAGTTGCTTTTCCCACGAGTTAGG	5	-	7884529-7884578	5p15.31a	Homo sapiens chromosome 5 open reading frame 49 (C5orf49), mRNA.					
Homo sapiens	RefSeq	NM_020356.2	ILMN_18849	CASS4	NM_020356.2	NM_020356.2		57091	55769584	NM_020356.2	CASS4	NP_065089.2	ILMN_1678061	0005720661	S	2136	GTCAACAGACTCCTGAGAGGAAACCCCGCTTATCTGAACACTGCCGGCTG	20	+	54466834-54466883	20q13.31a	Homo sapiens Cas scaffolding protein family member 4 (CASS4), mRNA.				HEFL	HEFL
Homo sapiens	RefSeq	NR_029944.1	ILMN_387862	MIR422A	NR_029944.1	NR_029944.1		494334	262205339	NR_029944.1	MIR422A		ILMN_3310396	0001690064	S	2	GAGAAGCACTGGACTTAGGGTCAGAAGGCCTGAGTCTCTCTGCTGCAGAT				15q22.31a	Homo sapiens microRNA 422a (MIR422A), microRNA.					
Homo sapiens	RefSeq	NM_016113.3	ILMN_13262	TRPV2	NM_016113.3	NM_016113.3		51393	22547178	NM_016113.3	TRPV2	NP_057197.2	ILMN_2049536	0004390301	S	2578	TGTCCTGGCTTCCCCTCCCAAGGAGGATGAGGATGGTGCCTCTGAGGAAA	17	+	16280844-16280893	17p11.2i	Homo sapiens transient receptor potential cation channel, subfamily V, member 2 (TRPV2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10201375] [evidence TAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [pmid 10201375] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	VRL; VRL-1; MGC12549; VRL1	VRL; VRL-1; MGC12549; VRL1
Homo sapiens	RefSeq	NM_153228.1	ILMN_21509	ANKFN1	NM_153228.2	NM_153228.2		162282	114842395	NM_153228.2	ANKFN1	NP_694960.2	ILMN_1811239	0006590152	S	2123	ACCTCTACACCAGGCAAGGAACTTCCGCCTCTACACACAGGAGGTGTTGG	17	+	51913166-51913178:51914716-51914752	17q22c	Homo sapiens ankyrin-repeat and fibronectin type III domain containing 1 (ANKFN1), mRNA.				FLJ38335	FLJ38335
Homo sapiens	RefSeq	NM_012295.2	ILMN_11059	CABIN1	NM_012295.2	NM_012295.2		23523	22027497	NM_012295.2	CABIN1	NP_036427.1	ILMN_1814044	0000240424	S	7068	TGACTTTGTAAATCTGCCCACACCCAGCTGGCCATATCCACCCCTCGACG	22	+	22904442-22904491	22q11.23b	Homo sapiens calcineurin binding protein 1 (CABIN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9655484] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [pmid 9655484] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]	KIAA0330; CAIN	KIAA0330; CAIN
Homo sapiens	Unigene	Hs.514893	ILMN_98753	HS.514893	Hs.514893		Hs.514893		41150940	XM_373778			ILMN_1915913	0001990524	S	543	TAGCTCTCTGGTGAGGGAGATCCGTGTGGAGGTCTCTGGCATTCCTGGGT					PREDICTED: Homo sapiens hypothetical LOC388477 (LOC388477), mRNA					
Homo sapiens	RefSeq	NM_018466.2	ILMN_3125	ALG13	NM_018466.2	NM_018466.2		55849	20070304	NM_018466.2	ALG13	NP_060936.1	ILMN_2147503	0000730520	S	1195	AGGACTTACTATTGTTTTTTAAGGATCTCCTCTCACAGTGGTAATGAAAC	X	+	110818548-110818597	Xq23a	Homo sapiens asparagine-linked glycosylation 13 homolog (S. cerevisiae) (ALG13), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Covalent attachment of a glycosyl residue to a lipid molecule [goid 30259] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + N-acetyl-D-glucosaminyl-diphosphodolichol = UDP + N,N''-diacetylchitobiosyldiphosphodolichol [goid 4577] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]	YGL047W; GLT28D1; MDS031	YGL047W; GLT28D1; MDS031
Homo sapiens	RefSeq	NM_001039775.1	ILMN_45818	AIM1L	NM_001039775.1	NM_001039775.1		55057	89886226	NM_001039775.1	AIM1L	NP_001034864.1	ILMN_2113340	0004220376	S	1905	TACGAGGATGGGCTGCTGAAGAACCAGATGGCCCCCACCATGAGCCTACA	1	-	26521378-26521401:26523230-26523255	1p36.11b	Homo sapiens absent in melanoma 1-like (AIM1L), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	FLJ10040; DKFZp434L1713; FLJ38020	FLJ38020; FLJ10040; DKFZp434L1713
Homo sapiens	RefSeq	XM_944018.1	ILMN_45818	AIM1L	NM_001039775.1	NM_001039775.1		55057	89886226	NM_001039775.1	AIM1L	NP_001034864.1	ILMN_1669557	0006620386	A	1890	AGCTGCATCTGGTACTACGAGGATGGGCTGCTGAAGAACCAGATGGCCCC	1	-	26521393-26521401:26523230-26523270	1p36.11b	Homo sapiens absent in melanoma 1-like (AIM1L), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	FLJ10040; DKFZp434L1713; FLJ38020	
Homo sapiens	RefSeq	NM_031427.1	ILMN_14953	DNAL1	NM_031427.1	NM_031427.1		83544	13899242	NM_031427.1	DNAL1	NP_113615.1	ILMN_2122300	0006100682	S	1067	AGGCAGCATGGTGATGGGAAGAGTTCCTCTTAGAAATACAGCAGGTCCGG	14	+	73232851-73232900	14q24.3a	Homo sapiens dynein, axonemal, light chain 1 (DNAL1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C14orf168; MGC12435	C14orf168; MGC12435
Homo sapiens	RefSeq	NM_031427.1	ILMN_14953	DNAL1	NM_031427.1	NM_031427.1		83544	13899242	NM_031427.1	DNAL1	NP_113615.1	ILMN_1730464	0002810500	S	591	GGGGATGAGGAAGAAGACAACTAATGCCACGCTTTCCACTGTGTGTTAAC	14	+	73232375-73232398:73232399-73232424	14q24.3a	Homo sapiens dynein, axonemal, light chain 1 (DNAL1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C14orf168; MGC12435	C14orf168; MGC12435
Homo sapiens	RefSeq	NM_003986.1	ILMN_2840	BBOX1	NM_003986.2	NM_003986.2		8424	95147560	NM_003986.2	BBOX1	NP_003977.1	ILMN_1734929	0003400386	S	1472	CTGGGATGTGGTCATGTCAAGGCTTCGTATCTTAAGGCAGAGGGTGGAGA	11	+	27077180-27077196:27078748-27078780	11p14.2a	Homo sapiens butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 (BBOX1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 45329] [pmid 9753662] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: 4-trimethylammoniobutanoate + 2-oxoglutarate + O2 = 3-hydroxy-4-trimethylammoniobutanoate + succinate + CO2 [goid 8336] [pmid 10526231] [evidence ISS]; Catalysis of the reaction: 4-trimethylammoniobutanoate + 2-oxoglutarate + O2 = 3-hydroxy-4-trimethylammoniobutanoate + succinate + CO2 [goid 8336] [pmid 9753662] [evidence IDA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of the reaction: 4-trimethylammoniobutanoate + 2-oxoglutarate + O2 = 3-hydroxy-4-trimethylammoniobutanoate + succinate + CO2 [goid 8336] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	G-BBH; BBOX; gamma-BBH; BBH	G-BBH; BBOX; gamma-BBH; BBH
Homo sapiens	Unigene	Hs.224449	ILMN_82597	HS.224449	Hs.224449		Hs.224449		13748881	BG460487			ILMN_1821671	0004880373	S	143	AGAACTGACACAGCGATGACACACTGCCTGCTGCTGGGCTTACACACCCA	21	+	32374624-32374659:32377658-32377671		RST42903 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_000435.1	ILMN_12369	NOTCH3	NM_000435.1	NM_000435.1		4854	4557798	NM_000435.1	NOTCH3	NP_000426.1	ILMN_1658926	0002340692	S	7990	TCCCTGTGTAGCTGAATTCCCAAGCCCTGCATTGTACAGCCCCCCACTCC	19	-	15131475-15131524	19p13.12b	Homo sapiens Notch homolog 3 (Drosophila) (NOTCH3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17292860] [evidence IPI]	CASIL; CADASIL	CASIL; CADASIL
Homo sapiens	RefSeq	NM_006461.3	ILMN_10359	SPAG5	NM_006461.3	NM_006461.3		10615	73623034	NM_006461.3	SPAG5	NP_006452.3	ILMN_2141259	0004180709	S	3119	GCAGGCCCAGGAAGAACAGCATCAGGAAGTCCAGAAGGCAAAAGAAGCAG	17	-	26906199-26906248	17q11.2a	Homo sapiens sperm associated antigen 5 (SPAG5), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 15504738] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [pmid 15504738] [evidence NAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		hMAP126; DEEPEST; MAP126	hMAP126; DEEPEST; MAP126
Homo sapiens	RefSeq	NM_005364.3	ILMN_5472	MAGEA8	NM_005364.3	NM_005364.3		4107	29029628	NM_005364.3	MAGEA8	NP_005355.2	ILMN_2069912	0000070470	S	1307	GTCACAGTTCTCAGTAGTGGGGAGCATGTTGGGTGTGAGGGAACACAGTG	X	+	148774796-148774845	Xq28b	Homo sapiens melanoma antigen family A, 8 (MAGEA8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC2182; MAGE8	MGC2182; MAGE8
Homo sapiens	RefSeq	NM_005364.3	ILMN_5472	MAGEA8	NM_005364.3	NM_005364.3		4107	29029628	NM_005364.3	MAGEA8	NP_005355.2	ILMN_2069915	0005700333	S	1680	TGCCTTACCTGTACCTCTTAGTGTACCCTATGTACCTGAATTTGCTTGGC	X	+	148775169-148775218	Xq28b	Homo sapiens melanoma antigen family A, 8 (MAGEA8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC2182; MAGE8	MGC2182; MAGE8
Homo sapiens	Unigene	Hs.551062	ILMN_110461	HS.551062	Hs.551062		Hs.551062		5133808	AF150372			ILMN_1845811	0006060017	S	56	GCTGTGTTCCTCTCTCGTAAAGCCGTGCGTTCTGTGGGCCGCCATTCAGA	5	+	89741627-89741676		AF150372 Human mRNA from cd34+ stem cells Homo sapiens cDNA clone CBMABE07, mRNA sequence					
Homo sapiens	RefSeq	NM_001017430.1	ILMN_15994	RBM3	NM_001017430.1	NM_001017430.1		5935	63054839	NM_001017430.1	RBM3	NP_001017430.1	ILMN_2298261	0003170551	I	549	CTGTCTAGCCCTGATAGTCGGGCAGCTTAGAGGAGTGGGGAGGAGAACTC	X	+	48319346-48319395	Xp11.23d	Homo sapiens RNA binding motif (RNP1, RRM) protein 3 (RBM3), transcript variant 2, mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8634703] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IEA]; Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein [goid 35196] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8634703] [evidence TAS]; Interacting selectively with any part of the larger ribosomal subunit [goid 43023] [evidence IEA]	RNPL; IS1-RNPL	RNPL; IS1-RNPL
Homo sapiens	RefSeq	NM_001017430.1	ILMN_15994	RBM3	NM_001017430.1	NM_001017430.1		5935	63054839	NM_001017430.1	RBM3	NP_001017430.1	ILMN_2414436	0004260162	A	1757	TTTGCAAATTAAAAGTGGGGGCAGAGGTGGGCGGATCACCTGAGGTCAGG	X	+	48321648-48321697	Xp11.23d	Homo sapiens RNA binding motif (RNP1, RRM) protein 3 (RBM3), transcript variant 2, mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8634703] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IEA]; Cleavage of stem-loop RNA precursors into microRNAs (miRNAs), a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein [goid 35196] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8634703] [evidence TAS]; Interacting selectively with any part of the larger ribosomal subunit [goid 43023] [evidence IEA]	RNPL; IS1-RNPL	RNPL; IS1-RNPL
Homo sapiens	RefSeq	XM_939918.1	ILMN_34469	LOC650831	XM_939918.1	XM_939918.1		650831	89037615	XM_939918.1	LOC650831	XP_945011.1	ILMN_1734513	0000290671	S	310	CTGAGGAGGAAGCAGTGGAGACTCAGGGACCTGGATAGAAAGTTAGTGGC					PREDICTED: Homo sapiens hypothetical protein LOC650831 (LOC650831), mRNA.					
Homo sapiens	RefSeq	NM_024520.1	ILMN_15922	C2ORF47	NM_024520.1	NM_024520.1		79568	13375659	NM_024520.1	C2orf47	NP_078796.1	ILMN_1795007	0004120377	S	1124	CAGAGGGAGTTCACACAAGGAGTAAAGCCTGACTGGACCATTGCACGGAT	2	+	200536705-200536754	2q33.1d	Homo sapiens chromosome 2 open reading frame 47 (C2orf47), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			FLJ22555; DKFZp666A212	FLJ22555; DKFZp666A212
Homo sapiens	RefSeq	NM_014207.2	ILMN_29547	CD5	NM_014207.2	NM_014207.2		921	24431962	NM_014207.2	CD5	NP_055022.1	ILMN_1753112	0005050347	S	2847	GCCAAGCCCAGGTCACAGATCTTCCCCCGACCATGCTGGGAATCCAGAAA	11	+	60651626-60651675	11q12.2b	Homo sapiens CD5 molecule (CD5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11390434] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1711157] [evidence NAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]	The process by which a cell in a multicellular organism interprets its surroundings [goid 8037] [pmid 1711157] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 3093892] [evidence NAS]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1711157] [evidence IPI]	T1; LEU1	T1; LEU1
Homo sapiens	RefSeq	NM_001011703.1	ILMN_20868	FAM125B	NM_001011703.1	NM_001011703.1		89853	58761489	NM_001011703.1	FAM125B	NP_001011703.1	ILMN_2263312	0006760739	I	2241	GTGGTCTAGAAGGGCCCAGAAATGGGCACCACCTCAGGCAGGTTTTGACT	9	+	128199295-128199344	9q33.3b	Homo sapiens family with sequence similarity 125, member B (FAM125B), transcript variant 2, mRNA.				FLJ00001; C9orf28	FLJ00001; C9orf28
Homo sapiens	RefSeq	NM_001011703.1	ILMN_20868	FAM125B	NM_001011703.1	NM_001011703.1		89853	58761489	NM_001011703.1	FAM125B	NP_001011703.1	ILMN_1702568	0001170544	A	677	ACTCATCTCAACCCACAACGCCTTCCCAGTCATCAGCTGCCTCCACCCCA	9	+	128197731-128197780	9q33.3b	Homo sapiens family with sequence similarity 125, member B (FAM125B), transcript variant 2, mRNA.				FLJ00001; C9orf28	FLJ00001; C9orf28
Homo sapiens	RefSeq	NM_033389.2	ILMN_8279	SSH2	NM_033389.2	NM_033389.2		85464	37674209	NM_033389.2	SSH2	NP_203747.2	ILMN_1672834	0002810468	S	8875	GTCCAGAAGACTCTCCTCTGACTGTTACCTTTGCCCCAAGCCACCCCAAA	17	-	27953206-27953255	17q11.2b	Homo sapiens slingshot homolog 2 (Drosophila) (SSH2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 11832213] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 11832213] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11832213] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA1725; MGC78588; SSH-2	KIAA1725; MGC78588; SSH-2
Homo sapiens	RefSeq	NM_002746.1	ILMN_11845	MAPK3	NM_002746.1	NM_002746.1		5595	38257140	NM_002746.1	MAPK3	NP_002737.1	ILMN_1667260	0002060561	S	1780	TGGAGAGCCCGGCGCCCCTGCCACCTCCCTGACCCGTCTAATATATAAAT				16p11.2d	Homo sapiens mitogen-activated protein kinase 3 (MAPK3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9687510] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16626623] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16456541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 17322878] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11741541] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7739560] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7687743] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 16626623] [evidence EXP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 7687743] [evidence NAS]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 11741541] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15950189] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKM3; ERK1; P44MAPK; P44ERK1	PRKM3; ERK1; P44MAPK; P44ERK1
Homo sapiens	RefSeq	XR_037206.1	ILMN_343342	LOC649346	XR_037206.1	XR_037206.1		649346	169173176	XR_037206.1	LOC649346		ILMN_3208965	0002340270	A	844	TCCTTCCCGGGCACAAGCATTTAGATAATCACTCTAAGGACACCACCCTC				8p23.1a	PREDICTED: Homo sapiens misc_RNA (LOC649346), miscRNA.					
Homo sapiens	RefSeq	XM_926714.1	ILMN_46735	LOC442448	XM_937272.1	XM_937272.1		442448	89060728	XM_937272.1	LOC442448	XP_942365.1	ILMN_1804654	0000520487	A	546	GGGGATGTGGAAAAGATGGAAGTGTCACAGGAACCAAGAGGCCGCACTGC				Xp11.3a	PREDICTED: Homo sapiens similar to Antigen KI-67 (LOC442448), mRNA.					
Homo sapiens	RefSeq	NM_206930.1	ILMN_21494	SYTL2	NM_206928.1	NM_206928.1		54843	46255063	NM_206928.1	SYTL2	NP_996811.1	ILMN_1682929	0005810278	A	3781	TGAGCCCAAATTCCACTGGCTCCTCCACTGAAAACTACTAAACCGGTGGA	11	-	85083838-85083885:85083886-85083887	11q14.1e	Homo sapiens synaptotagmin-like 2 (SYTL2), transcript variant d, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence ISS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence ISS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence ISS]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence ISS]	MGC102768; CHR11SYT; SGA72M; KIAA1597; SLP2	MGC102768; CHR11SYT; SGA72M; KIAA1597; SLP2
Homo sapiens	RefSeq	NM_030790.2	ILMN_168505	ITFG1	NM_030790.2	NM_030790.2		81533	21361932	NM_030790.2	ITFG1	NP_110417.2	ILMN_2064926	0006550446	S	1832	GGCAGGAAAAGAAAGCAGATGATAGAGAAAAACGACAAGAAGCCCACCGG	16	-	45747150-45747190:45750285-45750293	16q12.1a	Homo sapiens integrin alpha FG-GAP repeat containing 1 (ITFG1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDA08; TIP	CDA08; TIP
Homo sapiens	RefSeq	NM_004592.2	ILMN_9797	SFRS8	NM_004592.2	NM_004592.2		6433	23111061	NM_004592.2	SFRS8	NP_004583.2	ILMN_1692575	0004180379	A	2962	CAGCTTCCAAAAACCTGCAAACCAGCGCTTCCTGAGACGGGGCCAGCGGA	12	+	130849952-130849986:130849987-130850001	12q24.33c	Homo sapiens splicing factor, arginine/serine-rich 8 (suppressor-of-white-apricot homolog, Drosophila) (SFRS8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Selection of a splice site by components of the assembling spliceosome [goid 6376] [pmid 8940107] [evidence TAS]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 8940107] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC167082; SWAP	MGC167082; SWAP
Homo sapiens	RefSeq	NM_001037668.1	ILMN_26254	DEFB107A	NM_001037668.1	NM_001037668.1		245910	83415166	NM_001037668.1	DEFB107A	NP_001032757.2	ILMN_2214594	0005080767	S	203	GGTCACTGTGAAGCCGAATGTCTTACCTTTGAAGTAAAGATTGGGGGCTG	8	-	7706788-7706837	8p23.1e	Homo sapiens defensin, beta 107A (DEFB107A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		BD-7; DEFB107; DEFB-7	BD-7; DEFB107; DEFB-7
Homo sapiens	RefSeq	XM_927612.1	ILMN_37198	LOC644482	XM_927612.1	XM_927612.1		644482	88943848	XM_927612.1	LOC644482	XP_932705.1	ILMN_1666853	0000150292	S	121	TATTCCATCATGATCAATGAGGCCACACCCTACAACTATCCAGTGCCCGT	1	+	224218624-224218673	1q42.12c	PREDICTED: Homo sapiens similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa (LOC644482), mRNA.					
Homo sapiens	RefSeq	XM_936646.1	ILMN_35176	LOC647596	XM_936646.2	XM_936646.2		647596	113430486	XM_936646.2	LOC647596	XP_941739.2	ILMN_1686316	0001400202	S	290	AGCCCATGGGCCCGCCGGCCTACCAGGAGACGCTGGCTGGAGGAGCAACC					PREDICTED: Homo sapiens similar to scotin (LOC647596), mRNA.					
Homo sapiens	RefSeq	NM_080705.2	ILMN_18299	TRPV1	NM_080705.3	NM_080705.3		7442	117306162	NM_080705.3	TRPV1	NP_542436.2	ILMN_1813568	0001440470	A	3718	CCTTTGATGGAAAATGCAGAGGCCCTTCCTCTCTGTGCCGTGCTTGCTCC	17	-	3469062-3469111	17p13.3a	Homo sapiens transient receptor potential cation channel, subfamily V, member 1 (TRPV1), transcript variant 4, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9349813] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9349813] [evidence TAS]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [pmid 9349813] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [pmid 9349813] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	VR1; DKFZp434K0220	VR1; DKFZp434K0220
Homo sapiens	RefSeq	NM_080705.2	ILMN_18299	TRPV1	NM_080705.3	NM_080705.3		7442	117306162	NM_080705.3	TRPV1	NP_542436.2	ILMN_1651238	0006480739	I	110	AGGCAACGCCGCTGACAAAGAACATTGCCGAAAGGTTCATGGGAGGCTCC	17	-	3498966-3499015	17p13.3a	Homo sapiens transient receptor potential cation channel, subfamily V, member 1 (TRPV1), transcript variant 4, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9349813] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9349813] [evidence TAS]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [pmid 9349813] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [pmid 9349813] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]	VR1; DKFZp434K0220	VR1; DKFZp434K0220
Homo sapiens	RefSeq	NM_006133.1	ILMN_166001	DAGLA	NM_006133.1	NM_006133.1		747	27262631	NM_006133.1	DAGLA	NP_006124.1	ILMN_1683682	0005090736	S	5533	ATATGCAATCAGTAGCGAGCAGCCGGGCCCCACAGACCCTCATGCACTCT	11	+	61270830-61270879	11q12.2b	Homo sapiens diacylglycerol lipase, alpha (DAGLA), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [evidence IEA]	Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	C11orf11; DAGLALPHA; DAGL(ALPHA); NSDDR	C11orf11; DAGLALPHA; DAGL(ALPHA); NSDDR
Homo sapiens	RefSeq	NM_001037763.2	ILMN_8263	COL28A1	NM_001037763.2	NM_001037763.2		340267	154759254	NM_001037763.2	COL28A1	NP_001032852.2	ILMN_3240788	0004070450	S	3394	CAGGTCAACTCTTGTGCCCGATTTTGGTTCAGTGGCTGTAATGGCTCAGG	7	-	7472284-7472331:7476026-7476027	7p21.3e	Homo sapiens collagen, type XXVIII, alpha 1 (COL28A1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	COL28	COL28
Homo sapiens	RefSeq	NM_032053.1	ILMN_22991	PCDHGA4	NM_018917.2	NM_018917.2		56111	14196466	NM_018917.2	PCDHGA4	NP_061740.1	ILMN_1674774	0001010008	A	2107	GTCTTCCTGGCTTTTGTCACGGTGCTGCTAGCACTCAAGCTGAGACGCTG	5	+	140717058-140717107	5q31.3c	Homo sapiens protocadherin gamma subfamily A, 4 (PCDHGA4), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-A4	PCDH-GAMMA-A4
Homo sapiens	RefSeq	NM_024037.1	ILMN_25232	C1ORF135	NM_024037.1	NM_024037.1		79000	13128989	NM_024037.1	C1orf135	NP_076942.1	ILMN_1787280	0000150129	S	1973	TCTGGATGTGACTCTGTTACCCTTTTCCCACAAGATAGGAGGGAATCCCC	1	-	26160535-26160584	1p36.11b	Homo sapiens chromosome 1 open reading frame 135 (C1orf135), mRNA.				FLJ14264; MGC2603	FLJ14264; MGC2603
Homo sapiens	RefSeq	NM_014031.3	ILMN_10102	SLC27A6	NM_014031.3	NM_014031.3		28965	62865629	NM_014031.3	SLC27A6	NP_054750.1	ILMN_2377199	0000630292	A	1666	CTCATTTCTCGAGTGAATGCAAAAAATCCCTTCTTTGGCTATGCTGGGCC	5	+	128329634-128329683	5q23.3b	Homo sapiens solute carrier family 27 (fatty acid transporter), member 6 (SLC27A6), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving fatty acids with a chain length of C18 or greater [goid 38] [pmid 10471116] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [pmid 10471116] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	VLCS-H1; FATP6; ACSVL2; FACVL2; DKFZp779M0564	VLCS-H1; FATP6; ACSVL2; FACVL2; DKFZp779M0564
Homo sapiens	RefSeq	XM_371248.4	ILMN_34869	LOC374973	XM_371248.5	XM_371248.5		374973	113408592	XM_371248.5	LOC374973	XP_371248.2	ILMN_1772903	0006620482	A	565	GCTCCACAGCAGCCCCAGGCCAGATCCCCATTCCCACTTCCCATCTTTCA	1	+	46911497-46911546	1p33d	PREDICTED: Homo sapiens LOC374973 (LOC374973), mRNA.					
Homo sapiens	RefSeq	NM_002984.1	ILMN_138034	CCL4	NM_002984.1	NM_002984.1		6351	4506844	NM_002984.1	CCL4	NP_002975.1	ILMN_1674563	0000870754	S	537	AGGTGTCATTTCCATTATTTATATTAGTTTAGCCAAAGGATAAGTGTCCT	17	+	31456997-31457046	17q12b	Homo sapiens chemokine (C-C motif) ligand 4 (CCL4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2521882] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9759849] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 2521882] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10929056] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10929056] [evidence TAS]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 9759849] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9558100] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10929056] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2521882] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9743377] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 10841574] [evidence TAS]	 [goid 4716] [pmid 9973507] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10929056] [evidence TAS]	G-26; MGC126026; ACT2; SCYA4; MGC126025; LAG1; MIP-1-beta; MIP1B; MGC104418; AT744.1; SCYA2	G-26; MGC126026; ACT2; SCYA4; MGC126025; LAG1; MIP-1-beta; MIP1B; MGC104418; AT744.1; SCYA2
Homo sapiens	RefSeq	NM_006792.2	ILMN_171281	MORF4	NM_006792.2	NM_006792.2		10934	6996927	NM_006792.2	MORF4	NP_006783.2	ILMN_1770553	0004260224	S	417	AATGTTGGGCACCCAGCTACTCAACAAATTTGAGAGACCACAGTATGCCG	4	-	174773903-174773952	4q34.1c	Homo sapiens mortality factor 4 (MORF4), mRNA.				CSR; SEN1; SEN; CSRB	CSR; SEN1; SEN; CSRB
Homo sapiens	RefSeq	NM_018366.2	ILMN_10423	CNO	NM_018366.2	NM_018366.2		55330	40805834	NM_018366.2	CNO	NP_060836.1	ILMN_1685095	0006900195	S	1056	GCCTGTGTCTTCCAGCTCTAATCAGAAAGCTGCTTGTCGAGGGCATGGGG	4	+	6718897-6718946	4p16.1f	Homo sapiens cappuccino homolog (mouse) (CNO), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a melanosome. A melanosome is a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored [goid 32438] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ11230	FLJ11230
Homo sapiens	RefSeq	NR_003284.1	ILMN_165922	PA2G4P4	NR_003284.1	NR_003284.1		647033	124517657	NR_003284.1	PA2G4P4		ILMN_2181748	0002900497	S	2429	TGTCGCCAGTGGGGAAACATTAGAAGAAAATGAAGCTGGGGACAGGTGGG	3	-	158010026-158010075	3q25.31b	Homo sapiens proliferation-associated 2G4 pseudogene 4 (PA2G4P4), non-coding RNA.				PA2G4L1	PA2G4L1
Homo sapiens	RefSeq	XM_001717240.1	ILMN_350986	LOC728866	XM_001717240.1	XM_001717240.1		728866	169216552	XM_001717240.1	LOC728866	XP_001717292.1	ILMN_3248117	0002450373	S	20	GCGCACTAAATCGTCTCCAAGGGAAACAACCCAAATGGTATCGATGCAGC	X	+	537412-537432:537862-537890		PREDICTED: Homo sapiens hypothetical LOC728866 (LOC728866), mRNA.					
Homo sapiens	RefSeq	NM_024625.3	ILMN_13481	ZC3HAV1	NM_024625.3	NM_024625.3		56829	27477137	NM_024625.3	ZC3HAV1	NP_078901.3	ILMN_1729973	0003710243	I	2703	GGGAAGTCTGAGCGAGTCTCCTAAATACTCTGGGCTTTAGCTTCTCCAGC	7	-	138745513-138745562	7q34b	Homo sapiens zinc finger CCCH-type, antiviral 1 (ZC3HAV1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ13288; ZC3HDC2; FLB6421; ZAP; DKFZp686H1869; DKFZp686O19171; MGC48898; DKFZp686F2052; ZC3H2	FLJ13288; ZC3HDC2; FLB6421; ZAP; DKFZp686H1869; DKFZp686O19171; MGC48898; DKFZp686F2052; ZC3H2
Homo sapiens	RefSeq	NM_020828.1	ILMN_13127	ZFP28	NM_020828.1	NM_020828.1		140612	22094124	NM_020828.1	ZFP28	NP_065879.1	ILMN_1766544	0003130202	S	3607	GTAGCAGCAGAGTTGAGCAGTTGTGACAGGAGACCATGTGGCCTGCAGAG	19	+	57067690-57067739	19q13.43a	Homo sapiens zinc finger protein 28 homolog (mouse) (ZFP28), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC104540; KIAA1431; DKFZp686K03205	MGC104540; KIAA1431; DKFZp686K03205
Homo sapiens	RefSeq	NM_001012427.1	ILMN_28589	FOXP4	NM_001012426.1	NM_001012426.1		116113	60498988	NM_001012426.1	FOXP4	NP_001012426.1	ILMN_1773809	0000050053	A	5622	TCTGTCGCTCACTCGCCCCGCTTTCTCTGTCTCACCTTCATCCACTCTGC	6	+	41569795-41569844	6p21.1g	Homo sapiens forkhead box P4 (FOXP4), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ44184; FLJ40908; hFKHLA	FLJ44184; FLJ40908; hFKHLA
Homo sapiens	RefSeq	NM_001001734.1	ILMN_26091	ATP1A4	NM_001001734.1	NM_001001734.1		480	49249976	NM_001001734.1	ATP1A4	NP_001001734.1	ILMN_1705208	0005550274	I	58	GGGCCCTTCTCTGAACCAGGCTCCCCTGTCCTGCAACTCTGTCATTCACA	1	+	158413882-158413931	1q23.2c	Homo sapiens ATPase, Na+/K+ transporting, alpha 4 polypeptide (ATP1A4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Sodium:potassium-exchanging ATPases are tetrameric proteins, consisting of two large alpha subunits and two smaller beta subunits. The alpha subunits bear the active site and penetrate the membrane, while the beta subunits carry oligosaccharide groups and face the cell exterior [goid 5890] [pmid 7809153] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 7809153] [evidence TAS]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 7809153] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [pmid 7809153] [evidence TAS]; Any process involved in the controlled movement of a sperm cell [goid 30317] [pmid 12112599] [evidence IDA]; The regulation of the levels, transport, and metabolism of hydrogen ions (protons) within a cell or between a cell and its external environment [goid 30641] [pmid 12112599] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [pmid 7809153] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a inorganic cations with a valency of one from one side of a membrane to the other. Inorganic cations are atoms or small molecules with a positive charge that do not contain carbon in covalent linkage [goid 15077] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ATP1AL2; MGC25056; ATP1A1	ATP1AL2; MGC25056; ATP1A1
Homo sapiens	Unigene	Hs.482589	ILMN_95906	HS.482589	Hs.482589		Hs.482589		27825481	BX092762			ILMN_1909990	0001400431	S	315	GAGCCCCTGAATTAACCAACCTTGACACCAAACCTTGCTCTGCCTCCGAA	12	+	47960248-47960297		BX092762 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998P041785 ; IMAGE:727923, mRNA sequence					
Homo sapiens	RefSeq	NM_015963.4	ILMN_8784	THAP4	NM_015963.4	NM_015963.4		51078	47059038	NM_015963.4	THAP4	NP_057047.3	ILMN_2183261	0002000259	S	581	ACCGGCAGAGGAGCTGCAGGTTGGTCACCGTCCTCGAGTGGAAACCCGAT	2	-	242221837-242221886	2q37.3g	Homo sapiens THAP domain containing 4 (THAP4), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CGI-36	CGI-36
Homo sapiens	RefSeq	NM_001103184.1	ILMN_344826	FMN1	NM_001103184.1	NM_001103184.1		342184	157168328	NM_001103184.1	FMN1	NP_001096654.1	ILMN_3248672	0006180504	S	3592	GATGAAGACACATGGAAATGATGGCACTGGAGGTGGAGGACCTTGCACGC	15	-	33066460-33066509	15q13.3d	Homo sapiens formin 1 (FMN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	FLJ45135; MGC125288; FMN; MGC125289; DKFZP686C2281; DKFZp686G2387; LD	MGC125288; MGC125289; DKFZp686G2387; LD; FLJ45135; FMN; DKFZP686C2281
Homo sapiens	RefSeq	NM_032834.3	ILMN_163253	ALG10	NM_032834.3	NM_032834.3		84920	147904263	NM_032834.3	ALG10	NP_116223.3	ILMN_3243268	0003140711	S	2660	TGGCTGTGTGCAATTCTTGGAGTTCTTTGGCTTCTGGACAAATCTTGTCC	12	+	34072036-34072085	12p11.1b	Homo sapiens asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe) (ALG10), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	FLJ14751; KCR1	FLJ14751; KCR1
Homo sapiens	RefSeq	XM_930914.1	ILMN_171159	LOC653108	XR_016129.1	XR_016129.1		653108	113429079	XR_016129.1	LOC653108		ILMN_1785900	0001400543	S	2898	TTTCTGGTGCCTATGAGCTAGCTATCACCTACCTGAAAGGTGCTTAGAGG	21	+	13973082-13973131	21q11.2b	PREDICTED: Homo sapiens similar to coxsackie virus and adenovirus receptor precursor (LOC653108), mRNA.					
Homo sapiens	RefSeq	XM_001722509.1	ILMN_343580	LOC100131786	XM_001722509.1	XM_001722509.1		100131786	169178566	XM_001722509.1	LOC100131786	XP_001722561.1	ILMN_3285742	0003930647	M	604	TCTAACAGAAAACTGGGCAGGGCGCAGTGTCTCACACCTGTAATCCCAGC				9q34.3c	PREDICTED: Homo sapiens hypothetical protein LOC100131786 (LOC100131786), mRNA.					
Homo sapiens	RefSeq	NM_002217.2	ILMN_1303	ITIH3	NM_002217.3	NM_002217.3		3699	133925808	NM_002217.3	ITIH3	NP_002208.3	ILMN_1757461	0006560678	S	2759	CTGGAACATGGGCACAGAGAGGGGCCTGTGGGAGGGGCTGGGAAAATAAA	3	+	52817787-52817836	3p21.1c	Homo sapiens inter-alpha (globulin) inhibitor H3 (ITIH3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	H3P	H3P
Homo sapiens	RefSeq	NM_138793.2	ILMN_21488	CANT1	NM_138793.2	NM_138793.2		124583	31543621	NM_138793.2	CANT1	NP_620148.1	ILMN_1664012	0005860358	S	3152	TGCCTGGCTGTCTCCTTGACCCGCCTCCTAGATCATTGTCCTTGATGTCC	17	-	74499665-74499714	17q25.3c	Homo sapiens calcium activated nucleotidase 1 (CANT1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]	SHAPY; SCAN-1	SHAPY; SCAN-1
Homo sapiens	RefSeq	NM_005331.3	ILMN_24244	HBQ1	NM_005331.3	NM_005331.3		3049	14456712	NM_005331.3	HBQ1	NP_005322.1	ILMN_1696183	0004040170	S	540	TGAGCCACGTTATCTCGGCGCTGGTTTCCGAGTACCGCTGAACTGTGGGT	16	+	171067-171107:171108-171116	16p13.3f	Homo sapiens hemoglobin, theta 1 (HBQ1), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [pmid 7555018] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [pmid 7555018] [evidence TAS]	Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_130802.1	ILMN_1507	MEN1	NM_130802.1	NM_130802.1		4221	18860852	NM_130802.1	MEN1	NP_570714.1	ILMN_1683298	0007610619	I	251	AGGACTCTCCTTGGGGTTTGGGGGCTTGACCTGGGTGCGCTTTCTGGACA	11	-	64334489-64334538	11q13.1b	Homo sapiens multiple endocrine neoplasia I (MEN1), transcript variant e1D, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 12874027] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 12874027] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9465067] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15199122] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14508515] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11500056] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14508515] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 12874027] [evidence IDA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [pmid 14508515] [evidence IDA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [pmid 14992727] [evidence IPI]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 15199122] [evidence IDA]	The modification of histones by addition of methyl groups [goid 16571] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9989505] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 12226747] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [pmid 12226747] [evidence IDA]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [pmid 15563473] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 12874027] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 15331604] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 16690369] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [pmid 12874027] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12226747] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [pmid 11274402] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 12226747] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 11526476] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [pmid 15563473] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [pmid 15640349] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46329] [pmid 12226747] [evidence IDA]; Any process that stops or reduces the activity of the enzyme telomerase, which catalyzes of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 51974] [pmid 12837246] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices [goid 400] [pmid 15331604] [evidence IDA]; Interacting selectively with segment of DNA shaped like a Y. This shape occurs when DNA contains a region of paired double-stranded DNA on one end and a region of unpaired DNA strands on the opposite end [goid 403] [pmid 15331604] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 15331604] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [pmid 14992727] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 11274402] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11526476] [evidence IPI]	MEAI; SCG2	MEAI; SCG2
Homo sapiens	RefSeq	XM_001133202.2	ILMN_166209	NACAD	XM_001133202.2	XM_001133202.2		23148	169170359	XM_001133202.2	NACAD	XP_001133202.2	ILMN_3228470	0002070139	A	4464	CGCCAAAGCCAAGCAGAGTCGCAGTGAGAAGAAGGCCCGAAAGGCAATGT	7	-	45160145-45160152:45160490-45160531	7p13c	PREDICTED: Homo sapiens NAC alpha domain containing (NACAD), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]			
Homo sapiens	RefSeq	NR_002811.1	ILMN_15245	NCRNA00119	NR_002811.1	NR_002811.1		348808	84872093	NR_002811.1	NCRNA00119		ILMN_3237300	0004850601	S	2090	GGACTGTAAGTGCTCACTGCTCCTGGAAGGTGTGATTTGTTCCCAGCACC	3	+	132592650-132592699	3q22.1c-q22.1d	Homo sapiens non-protein coding RNA 119 (NCRNA00119), non-coding RNA.					
Homo sapiens	RefSeq	NM_181313.1	ILMN_13597	TAZ	NM_181311.1	NM_181311.1		6901	31317258	NM_181311.1	TAZ	NP_851828.1	ILMN_1707791	0002650626	A	1490	AACCAGGAGCTGCTCACTACCTCCTCAGGGATGGCCGTTGGCCACGTCTT	X	+	153302934-153302983	Xq28g	Homo sapiens tafazzin (cardiomyopathy, dilated 3A (X-linked); endocardial fibroelastosis 2; Barth syndrome) (TAZ), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15304507] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16857210] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 17043667] [evidence IMP]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [pmid 17043667] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 17043667] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cardiolipin, 1,3-bis(3-phosphatidyl)glycerol [goid 32049] [pmid 16873891] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cardiolipin, 1,3-bis(3-phosphatidyl)glycerol [goid 32049] [pmid 17043667] [evidence IMP]; The chemical reactions and pathways resulting in the formation of cardiolipin, 1,3-bis(3-phosphatidyl)glycerol [goid 32049] [pmid 11118295] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form mitochondrial respiratory chain complex I [goid 32981] [pmid 16857210] [evidence IMP]; The assembly of cristae, the inwards folds of the inner mitochondrial membrane [goid 42407] [pmid 17043667] [evidence IMP]; The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP, as it occurs in the mitochondrial inner membrane or chloroplast thylakoid membrane; as in, but not restricted to, the eukaryotes (Eukaryota, ncbi_taxonomy_id:2759) [goid 42775] [pmid 15304507] [evidence IDA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [pmid 17043667] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [pmid 17043667] [evidence IMP]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the reaction: 1-acyl-sn-glycero-3-phosphocholine + acyl-CoA = phosphatidylcholine + CoA [goid 47184] [pmid 12930833] [evidence IDA]	Taz1; G4.5; LVNCX; FLJ27390; XAP-2; EFE; EFE2; CMD3A; BTHS	Taz1; G4.5; LVNCX; FLJ27390; XAP-2; EFE; EFE2; CMD3A; BTHS
Homo sapiens	RefSeq	XR_016363.2	ILMN_177978	LOC643384	XR_016363.2	XR_016363.2		643384	169166443	XR_016363.2	LOC643384		ILMN_3219806	0004850494	A	1167	TCTCGGCCGCGGACCCGGGCCGCGTGTGAGCGCGCTTTGCACCTCCTATC	4	-	4195706-4195755	4p16.2b	PREDICTED: Homo sapiens hypothetical LOC643384 (LOC643384), mRNA.					
Homo sapiens	Unigene	Hs.129334	ILMN_76773	HS.129334	Hs.129334		Hs.129334		27844634	BX100799			ILMN_1869318	0004060609	S	33	CACCAAGTCCATCAGAGCAGCCTGGACATAATTGGGAATGGTGCCTGCAC	X	-	24236461-24236510		BX100799 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998E204110, mRNA sequence					
Homo sapiens	RefSeq	NM_001009938.1	ILMN_15118	SLC25A26	NM_001009938.1	NM_001009938.1		115286	58036488	NM_001009938.1	SLC25A26	NP_001009938.1	ILMN_1659894	0001070408	I	357	GTCAAAGGTGTGGGGAGGCTTGTGAGCTTCTGTGAGTTGTTGTGTGTGGC	3	+	66479485-66479522:66495974-66495985	3p14.1c	Homo sapiens solute carrier family 25, member 26 (SLC25A26), transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 14674884] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism, into, out of, within or between cells [goid 15805] [pmid 14674884] [evidence IMP]	Catalysis of the transfer of S-adenosylmethionine from one side of a membrane to the other. S-adenosylmethionine is S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism [goid 95] [pmid 14674884] [evidence IMP]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	SAMC	SAMC
Homo sapiens	RefSeq	NM_203453.2	ILMN_4922	PPAPDC2	NM_203453.2	NM_203453.2		403313	66773039	NM_203453.2	PPAPDC2	NP_982278.3	ILMN_1802628	0006370594	S	2558	CCCACAGCATCCTGAATACCGACTACCTCTTCACTTGCTAAAGCAGCTAA	9	+	4654855-4654904	9p24.1c	Homo sapiens phosphatidic acid phosphatase type 2 domain containing 2 (PPAPDC2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	bA6J24.6; FLJ46512; FLJ90191; PSDP; MGC15483	bA6J24.6; FLJ46512; FLJ90191; PSDP; MGC15483
Homo sapiens	Unigene	Hs.250648	ILMN_83371	HS.250648	Hs.250648		Hs.250648		50484079	CR603272			ILMN_1847965	0004830014	S	764	TGAAACTGGTCCACTATGACGCAGCAGGGGCAGTTTGGCAGAGCATCCTC	3	-	197681269-197681318		full-length cDNA clone CS0DC013YI10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human)					
Homo sapiens	Unigene	Hs.564948	ILMN_117520	HS.564948	Hs.564948		Hs.564948		2743579	AA725872			ILMN_1879928	0004490494	S	264	TGAGGTTAGGACTGCAACAAAGACGGCTGCCCAGGCTCTGCACAGGGATG	16	-	20127784-20127825:20128076-20128083		ai23h02.s1 Soares_testis_NHT Homo sapiens cDNA clone 1343667 3, mRNA sequence					
Homo sapiens	RefSeq	NM_013410.2	ILMN_28560	AK3L1	NM_013410.2	NM_013410.2		205	53831999	NM_013410.2	AK3L1	NP_037542.1	ILMN_2338038	0000160148	A	2006	GGGGTTGAGCAGAATGTTGTACTAGCTGTGCCTGGACTGAGTATAACAGC	1	+	65465577-65465626	1p31.3b	Homo sapiens adenylate kinase 3-like 1 (AK3L1), nuclear gene encoding mitochondrial protein, transcript variant 6, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AK4; AK3	AK4; AK3
Homo sapiens	RefSeq	XM_931373.1	ILMN_29805	CXCL16	NM_022059.1	NM_022059.1		58191	11545764	NM_022059.1	CXCL16	NP_071342.1	ILMN_1672278	0000290379	S	107	GTTCGGTTCAGGAGGCCGCCCGCCTGGCCCGTCCGCCGACCTGTGAGGCG	17	-	4589707-4589756	17p13.2c	Homo sapiens chemokine (C-X-C motif) ligand 16 (CXCL16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11017100] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11017100] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11290797] [evidence NAS]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 11060282] [evidence NAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 11290797] [evidence NAS]; The directed movement of a lymphocyte in response to an external stimulus [goid 48247] [pmid 11017100] [evidence NAS]	Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence ISS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [pmid 11060282] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence ISS]	SRPSOX; CXCLG16; SR-PSOX	
Homo sapiens	RefSeq	NM_022059.1	ILMN_29805	CXCL16	NM_022059.1	NM_022059.1		58191	11545764	NM_022059.1	CXCL16	NP_071342.1	ILMN_1728478	0006280332	S	2081	CCATACGGGTTGGTTTCACCTCCTCAGTCCCTTGCCTACCCCAGTGAGAG	17	-	4583661-4583710	17p13.2c	Homo sapiens chemokine (C-X-C motif) ligand 16 (CXCL16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11017100] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11017100] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11290797] [evidence NAS]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 11060282] [evidence NAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 11290797] [evidence NAS]; The directed movement of a lymphocyte in response to an external stimulus [goid 48247] [pmid 11017100] [evidence NAS]	Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [evidence ISS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [pmid 11060282] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence ISS]	SRPSOX; CXCLG16; SR-PSOX	SRPSOX; CXCLG16; SR-PSOX
Homo sapiens	RefSeq	NM_001005468.1	ILMN_2208	OR8B2	NM_001005468.1	NM_001005468.1		26595	53793674	NM_001005468.1	OR8B2	NP_001005468.1	ILMN_1815849	0006100440	S	580	GTCAACGAGGTGGTTGTTCTCATTGTTGTGGGTACTAATATCACGGTACC	11	-	124252610-124252659	11q24.2a	Homo sapiens olfactory receptor, family 8, subfamily B, member 2 (OR8B2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-310; OR11-309	OR11-310; OR11-309
Homo sapiens	RefSeq	NM_016105.2	ILMN_4459	FKBP7	NM_016105.2	NM_016105.2		51661	31317232	NM_016105.2	FKBP7	NP_057189.1	ILMN_1685084	0003610360	I	504	CCTTGTCTCATGTCACAGAACAACCCTGCATGTCTTGAAATGCATGTACT	2	-	179046031-179046080	2q31.2b	Homo sapiens FK506 binding protein 7 (FKBP7), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FKBP23; PPIase; MGC9420	FKBP23; PPIase; MGC9420
Homo sapiens	RefSeq	NM_177925.1	ILMN_20850	H2AFJ	NM_177925.2	NM_177925.2		55766	145301619	NM_177925.2	H2AFJ	NP_808760.1	ILMN_1708728	0005310411	A	412	GAGTTAAACAAGCTGCTGGGCAAAGTGACCATCGCTCAGGGCGGCGTCCT	12	+	14818948-14818997	12p12.3e	Homo sapiens H2A histone family, member J (H2AFJ), transcript variant 1, mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ10903; MGC921	FLJ10903; MGC921
Homo sapiens	Unigene	Hs.572246	ILMN_124427	HS.572246	Hs.572246		Hs.572246		8907328	BE220010			ILMN_1853920	0002120095	S	417	GTGGAGAGGGAGGTGGAAGAGGATGGGCATAAAAAGACGACTACTGGCTC	13	+	20715196-20715245		hv65h08.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3178335 3, mRNA sequence					
Homo sapiens	RefSeq	NR_030194.1	ILMN_387851	MIR518F	NR_030194.1	NR_030194.1		574472	262205313	NR_030194.1	MIR518F		ILMN_3308657	0006110138	S	33	TCTCTTGTCTAAAAGAAAAGAAAGCGCTTCTCTTTAGAGGATTACTCTTT				19q13.41b	Homo sapiens microRNA 518f (MIR518F), microRNA.					
Homo sapiens	RefSeq	XM_937878.1	ILMN_32836	LOC648796	XM_937878.1	XM_937878.1		648796	88981177	XM_937878.1	LOC648796	XP_942971.1	ILMN_1716234	0001260026	S	61	ACCCCGACCCCTTTCTGCGGCCCCTCTGCCCGCTGGGTCGCCCACCCAGA					PREDICTED: Homo sapiens similar to FLJ44477 protein (LOC648796), mRNA.					
Homo sapiens	Unigene	Hs.554470	ILMN_111968	HS.554470	Hs.554470		Hs.554470		2094704	AA420798			ILMN_1888057	0000510671	S	419	CTCACGGAGTTCACTGCCTTGTGACAGTGCCAATGTAGCTGGGGACTAGC	7	-	27283812-27283861		nc63e05.r1 NCI_CGAP_Pr1 Homo sapiens cDNA clone IMAGE:745952, mRNA sequence					
Homo sapiens	RefSeq	NM_033338.4	ILMN_177432	CASP7	NM_033338.4	NM_033338.4		840	73623017	NM_033338.4	CASP7	NP_203124.1	ILMN_2362974	0006370441	A	1163	CCTGGAGGAGCACGGAAAAGACCTGGAAATCATGCAGATCCTCACCAGGG	10	+	115470885-115470917:115471400-115471416	10q25.3a	Homo sapiens caspase 7, apoptosis-related cysteine peptidase (CASP7), transcript variant delta, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8576161] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 12665508] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9922454] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9325343] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11257231] [evidence EXP]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [pmid 12665508] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12888622] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [pmid 8576161] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12665508] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12888622] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ICE-LAP3; CMH-1; MCH3	ICE-LAP3; CMH-1; MCH3
Homo sapiens	RefSeq	NM_001030004.1	ILMN_4275	HNF4A	NM_001030004.1	NM_001030004.1		3172	71725335	NM_001030004.1	HNF4A	NP_001025175.1	ILMN_2372124	0004040646	A	459	GCGACATTCGGGCGAAGAAGATTGCCAGCATCGCAGATGTGTGTGAGTCC	20	+	42476589-42476638	20q13.12a	Homo sapiens hepatocyte nuclear factor 4, alpha (HNF4A), transcript variant 6, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7615825] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14563941] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis [goid 6591] [pmid 17827783] [evidence IMP]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [pmid 17827783] [evidence IMP]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 12911579] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 18163890] [evidence IMP]; Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10552] [pmid 17827783] [evidence IMP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 19216] [pmid 10551874] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 18163890] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [pmid 17827783] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7615825] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 12220494] [evidence IDA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 5504] [pmid 12220494] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12220494] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TCF; NR2A21; HNF4; NR2A1; HNF4a9; HNF4a7; TCF14; FLJ39654; HNF4a8; MODY1; MODY	TCF; NR2A21; HNF4; NR2A1; HNF4a9; HNF4a7; TCF14; FLJ39654; HNF4a8; MODY1; MODY
Homo sapiens	RefSeq	NM_174903.4	ILMN_36858	RNF151	NM_174903.4	NM_174903.4		146310	116686097	NM_174903.4	RNF151	NP_777563.2	ILMN_2203073	0006940050	S	316	AGGACTCATGCCCCTTTGAGCTAACGGCCTGCCCCAACGAGGGCTGCACC	16	+	1958497-1958546	16p13.3e	Homo sapiens ring finger protein 151 (RNF151), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129921	MGC129921
Homo sapiens	RefSeq	NM_181506.4	ILMN_364339	LRRC70	NM_181506.4	NM_181506.4		100130733	198041767	NM_181506.4	LRRC70	NP_852607.3	ILMN_3238216	0007570347	S	2206	GAATTATATGAGGTTAGCATTATTAAAATATGTTTTTAATAATTAAAAAA	5	+	61877232-61877275	5q12.1c	Homo sapiens leucine rich repeat containing 70 (LRRC70), mRNA.					
Homo sapiens	RefSeq	XM_001713826.1	ILMN_351676	LOC100133576	XM_001713826.1	XM_001713826.1		100133576	169214180	XM_001713826.1	LOC100133576	XP_001713878.1	ILMN_3248546	0004490088	S	1	GGGGGCCTCCACATGCGGCTGATGACAGCACTTCTGCTGAGACGCTGTGA					PREDICTED: Homo sapiens hypothetical protein LOC100133576 (LOC100133576), partial mRNA.					
Homo sapiens	RefSeq	NM_015161.1	ILMN_4103	ARL6IP1	NM_015161.1	NM_015161.1		23204	24308006	NM_015161.1	ARL6IP1	NP_055976.1	ILMN_2113362	0005960324	S	1871	TTAGGAATGAACTTCTGAGGGCCAAAAAATGTGACTGACGGGAACAATTC	16	-	18803334-18803383	16p12.3b	Homo sapiens ADP-ribosylation factor-like 6 interacting protein 1 (ARL6IP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A translocation complex that constitutes the specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. Composed of a heterotetramer of alpha, beta, gamma and delta subunits (translocon-associated proteins or TRAPs). In yeast it is a heterotrimeric complex consisting of Sec61p, Sbh1p, and Sss1p. The Sec61 complex functions in cotranslational and posttranslational translocation events [goid 5784] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria [goid 6613] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARMER; AIP1; KIAA0069; ARL6IP	ARMER; AIP1; KIAA0069; ARL6IP
Homo sapiens	RefSeq	NM_015161.1	ILMN_4103	ARL6IP1	NM_015161.1	NM_015161.1		23204	24308006	NM_015161.1	ARL6IP1	NP_055976.1	ILMN_1708416	0002690047	S	1736	AGGGCTGTTGGTGAGAGCAGACTTGAGGTGATGATAGTTGGCCTCTGGTC	16	-	18803469-18803518	16p12.3b	Homo sapiens ADP-ribosylation factor-like 6 interacting protein 1 (ARL6IP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A translocation complex that constitutes the specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. Composed of a heterotetramer of alpha, beta, gamma and delta subunits (translocon-associated proteins or TRAPs). In yeast it is a heterotrimeric complex consisting of Sec61p, Sbh1p, and Sss1p. The Sec61 complex functions in cotranslational and posttranslational translocation events [goid 5784] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria [goid 6613] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ARMER; AIP1; KIAA0069; ARL6IP	ARMER; AIP1; KIAA0069; ARL6IP
Homo sapiens	RefSeq	NM_145315.3	ILMN_14055	LACE1	NM_145315.3	NM_145315.3		246269	62241031	NM_145315.3	LACE1	NP_660358.2	ILMN_2203987	0000870484	S	1955	GACGTCTGGATACCTTCAAGCTTTGGCTGCATGGTGGTGGCATGTTAGAA	6	+	108794174-108794223	6q21e	Homo sapiens lactation elevated 1 (LACE1), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	AFG1	AFG1
Homo sapiens	Unigene	Hs.436592	ILMN_91741	HS.436592	Hs.436592		Hs.436592		83131675	DB304452			ILMN_1823906	0001260050	S	317	GCTTATATTACCAGAGCGAACCACAAGGTCTGAAGGACAGCCACGGGGGC	X	-	129380151-129380200		DB304452 BRAWH3 Homo sapiens cDNA clone BRAWH3001290 3, mRNA sequence					
Homo sapiens	RefSeq	XR_039536.1	ILMN_351261	LOC100130092	XR_039536.1	XR_039536.1		100130092	169172598	XR_039536.1	LOC100130092		ILMN_3195376	0000270270	A	642	TCTACTTCGGAAAGCTATAGAACATTGAATTGCCAGGAGAACAAGGGGGA				8q24.23a	PREDICTED: Homo sapiens misc_RNA (LOC100130092), miscRNA.					
Homo sapiens	RefSeq	NM_024327.1	ILMN_29021	ZNF576	NM_024327.1	NM_024327.1		79177	13236574	NM_024327.1	ZNF576	NP_077303.1	ILMN_1687711	0003310414	S	1246	GGAGTCCTTGTGTCTCTTTTCCACCCCCTGCCATCCTCACTTAGAGGGGC	19	+	48795774-48795823	19q13.31a	Homo sapiens zinc finger protein 576 (ZNF576), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC2508; FLJ22700	MGC2508; FLJ22700
Homo sapiens	RefSeq	XM_938225.1	ILMN_37847	MYH15	XM_938225.1	XM_938225.1		22989	88970859	XM_938225.1	MYH15	XP_943318.1	ILMN_1797164	0000050494	A	6944	CACAGTCGACCTACAGTGACTTCAGGCCCAGAACCAGATGCAGAGGGAAC				3q13.13a	PREDICTED: Homo sapiens myosin, heavy polypeptide 15 (MYH15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_153840.2	ILMN_26362	GPR110	NM_153840.2	NM_153840.2		266977	61743939	NM_153840.2	GPR110	NP_722582.2	ILMN_2241124	0006960367	I	2811	CTGCCAAACCCAAATTCTCAAAGCCTTTCAACCCACTGCAAAACAAAGGC	6	-	47075989-47075991:47077197-47077243	6p12.3e	Homo sapiens G protein-coupled receptor 110 (GPR110), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	hGPCR36; FLJ22684; PGR19; MGC125952; KPG_012; FLJ30646	hGPCR36; FLJ22684; PGR19; MGC125952; KPG_012; FLJ30646
Homo sapiens	RefSeq	NM_153840.2	ILMN_26362	GPR110	NM_153840.2	NM_153840.2		266977	61743939	NM_153840.2	GPR110	NP_722582.2	ILMN_1744299	0006650202	I	2589	CCCCTCTGCTAGGGCTCACCTGGGGCTTTGGAATAGGAACAATAGTGGAC	6	-	47084690-47084739	6p12.3e	Homo sapiens G protein-coupled receptor 110 (GPR110), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	hGPCR36; FLJ22684; PGR19; MGC125952; KPG_012; FLJ30646	hGPCR36; FLJ22684; PGR19; MGC125952; KPG_012; FLJ30646
Homo sapiens	RefSeq	NR_002305.1	ILMN_18775	PDIA3P	NR_002305.1	NR_002305.1		171423	62510077	NR_002305.1	PDIA3P		ILMN_2075436	0000780603	S	1804	AAGGACTCTTCCACCAGAGATGGGAAAACCACTGGGGAGGACTAGGACCC	1	+	145117857-145117906	1q21.1c	Homo sapiens protein disulfide isomerase family A, member 3 pseudogene (PDIA3P), non-coding RNA.				ERp60; GRP58P	ERp60; GRP58P
Homo sapiens	RefSeq	NR_002305.1	ILMN_18775	PDIA3P	NR_002305.1	NR_002305.1		171423	62510077	NR_002305.1	PDIA3P		ILMN_2075440	0000780632	S	1268	GTTTGTCATGCAGGAGGATTTCTCGCGTGATGGGAATGCTCTGGAGAGGT	1	+	145117321-145117370	1q21.1c	Homo sapiens protein disulfide isomerase family A, member 3 pseudogene (PDIA3P), non-coding RNA.				ERp60; GRP58P	ERp60; GRP58P
Homo sapiens	RefSeq	NM_002773.2	ILMN_174859	PRSS8	NM_002773.3	NM_002773.3		5652	126513135	NM_002773.3	PRSS8	NP_002764.1	ILMN_1796461	0000990619	S	1872	GAACTGGGCTGGCGCTTGGATCTGGGGTGGGAGTAACAGGGCAGAAATGA	16	-	31142772-31142821	16p11.2c	Homo sapiens protease, serine, 8 (PRSS8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10077646] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10077646] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7768952] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PROSTASIN; CAP1	PROSTASIN; CAP1
Homo sapiens	RefSeq	NM_213650.1	ILMN_10964	SFXN4	NM_213650.1	NM_213650.1		119559	47458808	NM_213650.1	SFXN4	NP_998815.1	ILMN_2363361	0000730092	A	898	TGGATTTTGAAACTGTCTTGTACTGTCCTGGCAATGGGACTGATGGTGCC	10	-	120895771-120895820	10q26.11c	Homo sapiens sideroflexin 4 (SFXN4), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]	Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	BCRM1	BCRM1
Homo sapiens	RefSeq	NR_031656.1	ILMN_388724	MIR1255A	NR_031656.1	NR_031656.1		100302193	269847299	NR_031656.1	MIR1255A		ILMN_3308896	0007380669	S	59	CTAAAGAAACTATCTTCTTTGCTCATCCTTGAGAAGCAACTCCTTATCCA					Homo sapiens microRNA 1255a (MIR1255A), microRNA.					
Homo sapiens	RefSeq	XM_038150.5	ILMN_308510	MAST3	NM_015016.1	NM_015016.1		23031	150170728	NM_015016.1	MAST3	NP_055831.1	ILMN_1738749	0004200475	A	5592	TCGTGGCAGAACGGAGCATCAGCCAGACCCTGTTGTGGGCGTTGTCATCA	19	+	18123198-18123247	19p13.11c	Homo sapiens microtubule associated serine/threonine kinase 3 (MAST3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15951562] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA0561	
Homo sapiens	RefSeq	NM_032411.1	ILMN_7408	C2ORF40	NM_032411.1	NM_032411.1		84417	14165275	NM_032411.1	C2orf40	NP_115787.1	ILMN_1676822	0003140113	S	502	CGGAGCCCCTACGGCTTTAGGCATGGAGCCAGCGTCAACTACGATGACTA	2	+	106060761-106060810	2q12.2b	Homo sapiens chromosome 2 open reading frame 40 (C2orf40), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]			ECRG4	ECRG4
Homo sapiens	RefSeq	NM_001042705.1	ILMN_167302	IQCJ	NM_001042705.1	NM_001042705.1		654502	111607464	NM_001042705.1	IQCJ	NP_001036170.1	ILMN_3234179	0001980561	I	543	GGAGCCCCAGATAGAAAGACTTGGTTTTCTCACCCTCCAGTGAATGGACC	3	+	158983150-158983192:158983193-158983199	3q25.33a	Homo sapiens IQ motif containing J (IQCJ), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_017672.2	ILMN_11670	TRPM7	NM_017672.2	NM_017672.2		54822	29893551	NM_017672.2	TRPM7	NP_060142.2	ILMN_1667047	0004280452	S	6844	GGCAGATTGCAGTGCAACCTTATGCCAATAAAATGTAATTTAACAGCCCC	15	-	48640106-48640155	15q21.2a	Homo sapiens transient receptor potential cation channel, subfamily M, member 7 (TRPM7), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules that require the presence of calcium for the interaction [goid 16340] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IEA]	LTRPC7; FLJ20117; CHAK; FLJ25718; CHAK1; TRP-PLIK	LTRPC7; FLJ20117; CHAK; FLJ25718; CHAK1; TRP-PLIK
Homo sapiens	RefSeq	XM_939426.1	ILMN_46426	TXNRD3IT1	NM_001039783.1	NM_001039783.1		645840	89886240	NM_001039783.1	TXNRD3IT1	NP_001034872.1	ILMN_1678310	0007570400	S	247	CTGTCTTACGACACTTAGATGAGAAAGTAGACAAGGAAAGAGGACAGCAG	3	-	127809267-127809316	3q21.3a	Homo sapiens thioredoxin reductase 3 intronic transcript 1 (TXNRD3IT1), mRNA.				MGC163420; MGC163418	
Homo sapiens	RefSeq	NM_001039783.1	ILMN_46426	TXNRD3IT1	NM_001039783.1	NM_001039783.1		645840	89886240	NM_001039783.1	TXNRD3IT1	NP_001034872.1	ILMN_2188155	0004150056	S	810	GTGGAGGGTAAGGCAGAGCCAGCCATGAGAAAGGATGATGTTTGCCCAGG	3	-	127773696-127773745	3q21.3a	Homo sapiens thioredoxin reductase 3 intronic transcript 1 (TXNRD3IT1), mRNA.				MGC163420; MGC163418	MGC163420; MGC163418
Homo sapiens	RefSeq	NM_031271.2	ILMN_27944	TEX15	NM_031271.3	NM_031271.3		56154	133778960	NM_031271.3	TEX15	NP_112561.2	ILMN_1685909	0006620553	S	9294	AGTCAGACAGAGCCCTCACAACTGGATAGACCTTTCTCAAGGGTTAGCCC	8	-	30809370-30809419	8p12e	Homo sapiens testis expressed 15 (TEX15), mRNA.				DKFZP434M2415	DKFZP434M2415
Homo sapiens	RefSeq	XR_042175.1	ILMN_335008	GGT3	XR_042175.1	XR_042175.1		2679	169217651	XR_042175.1	GGT3		ILMN_3235704	0007160685	S	1	ATGCAAGGTCCTGGGCCTGCCCTTGGGCCAGCTCTGGGGTCTCAGCAGGT				22q11.21b	PREDICTED: Homo sapiens misc_RNA (GGT3), miscRNA.					
Homo sapiens	RefSeq	NR_001589.1	ILMN_12345	HBBP1	NR_001589.1	NR_001589.1		3044	38683401	NR_001589.1	HBBP1		ILMN_1653814	0006330184	S	478	GCCCACAAGACCACTGAGTTCCCTGTCCACTATGTTTGTACCTATGGTCC	11	-	5263316-5263365	11p15.4c	Homo sapiens hemoglobin, beta pseudogene 1 (HBBP1), non-coding RNA.					
Homo sapiens	RefSeq	NM_201434.1	ILMN_176672	RAB5C	NM_201434.1	NM_201434.1		5878	41393613	NM_201434.1	RAB5C	NP_958842.1	ILMN_1769665	0000450164	A	1534	GCATTATTGTGACAGCCACGAACCCATTGCCCACAACCCCTCCACCCTCG	17	-	40277185-40277234	17q21.2b	Homo sapiens RAB5C, member RAS oncogene family (RAB5C), transcript variant 1, mRNA.				RAB5CL; RABL; MGC138857; MGC117217	RAB5CL; RABL; MGC138857; MGC117217
Homo sapiens	RefSeq	XM_934575.1	ILMN_46208	LOC643943	XM_934575.1	XM_934575.1		643943	89040136	XM_934575.1	LOC643943	XP_939668.1	ILMN_1735467	0006770068	A	314	GTCATGACAAAATCAATGGAAAGAGGAAGACCGCCAGAAAACAGAAAATG	16	+	28965197-28965199:28965200-28965239:28969324-28969330		PREDICTED: Homo sapiens region containing hypothetical protein LOC283970; similar to nuclear pore complex interacting protein, transcript variant 2 (LOC643943), mRNA.					
Homo sapiens	RefSeq	XM_374461.4	ILMN_37344	LOC392713	XM_374461.4	XM_374461.4		392713	89026066	XM_374461.4	LOC392713	XP_374461.4	ILMN_1661389	0004920259	S	1656	GGCTGGAAGAGTCAGCACTTTCATGTTCTCAGCGGTTATCCTTGGATGTG				7q22.1e	PREDICTED: Homo sapiens similar to PMS1 protein homolog 2 (DNA mismatch repair protein PMS2) (LOC392713), mRNA.					
Homo sapiens	RefSeq	NM_020904.1	ILMN_5126	PLEKHA4	NM_020904.1	NM_020904.1		57664	10190743	NM_020904.1	PLEKHA4	NP_065955.1	ILMN_1755173	0002490577	S	2852	AATCCAGCTTGTAATCCGCCCAAAAGCGGCAGCCAATCGGAGCGCGAGGA	19	-	54032321-54032357:54032358-54032370	19q13.33a	Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 (PLEKHA4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [pmid 11001876] [evidence NAS]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	PEPP1	PEPP1
Homo sapiens	RefSeq	XM_942974.1	ILMN_31082	LOC642236	XM_943005.2	XM_943005.2		642236	113414019	XM_943005.2	LOC642236	XP_948098.2	ILMN_1724230	0000780255	A	574	GTTGTTGGGCGTTCAGATGCAATTGGACCAAGAGAACAATGGGAACCAGT				9q12h	PREDICTED: Homo sapiens similar to FRG1 protein (FSHD region gene 1 protein), transcript variant 8 (LOC642236), mRNA.					
Homo sapiens	RefSeq	XM_034819.6	ILMN_33936	ZNF629	XM_034819.6	XM_034819.6		23361	89040263	XM_034819.6	ZNF629	XP_034819.4	ILMN_1810891	0005870687	A	5755	TGAAACTGCTATGGACATGGAGGTCAGATGGGAACTTGGAACTGGGCATG	16	-	30697513-30697562	16p11.2c	PREDICTED: Homo sapiens zinc finger protein 629 (ZNF629), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_926583.1	ILMN_35425	LOC643222	XM_926583.1	XM_926583.1		643222	89061332	XM_926583.1	LOC643222	XP_931676.1	ILMN_1662052	0006560273	S	61	GGAGCATCGGCCAGCGCCCGGCGCCCTCGCATCCGATCGGCAGCCATGGT	Y	+	14373028-14373077		PREDICTED: Homo sapiens similar to Anosmin-1 precursor (Kallmann syndrome protein) (Adhesion molecule-like X-linked) (LOC643222), mRNA.					
Homo sapiens	RefSeq	NM_005628.1	ILMN_29291	SLC1A5	NM_005628.1	NM_005628.1		6510	5032092	NM_005628.1	SLC1A5	NP_005619.1	ILMN_1707720	0007610433	S	2694	GTACGTCCCACCCTGTCCCCAGATCCCCTATTCCCTCCACAATAACAGAA	19	-	51970080-51970129	19q13.32b	Homo sapiens solute carrier family 1 (neutral amino acid transporter), member 5 (SLC1A5), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8702519] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8702519] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells [goid 15804] [pmid 10051606] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10051606] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [pmid 10051606] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]	M7V1; ATBO; FLJ31068; ASCT2; AAAT; R16; M7VS1; RDRC	M7V1; ATBO; FLJ31068; ASCT2; AAAT; R16; M7VS1; RDRC
Homo sapiens	RefSeq	XR_039315.1	ILMN_336376	LOC100132184	XR_039315.1	XR_039315.1		100132184	169161094	XR_039315.1	LOC100132184		ILMN_3236746	0004670687	S	1443	ACACAGGCCTCCCTAACAACTGTTTCAGTACCGACTGAGTGGTTCAATTA	1	-	22451-22500		PREDICTED: Homo sapiens misc_RNA (LOC100132184), miscRNA.					
Homo sapiens	RefSeq	NM_006361.4	ILMN_10277	HOXB13	NM_006361.5	NM_006361.5		10481	84043952	NM_006361.5	HOXB13	NP_006352.2	ILMN_1742677	0004280592	S	2712	ATAAGCTCAAACCCACCAACGATCGGGCAAGTAAACCCCCTCCCTCGCCG	17	-	46802401-46802450	17q21.32c	Homo sapiens homeobox B13 (HOXB13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 9665387] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 9665387] [evidence TAS]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PSGD	
Homo sapiens	Unigene	Hs.107801	ILMN_75015	HS.107801	Hs.107801		Hs.107801		31443423	CD511705			ILMN_1865735	0001690162	S	60	AGGAGTCGGCCTGCTCAGTCCCCACGACATAGCAGGACTAGGTTGACAAA	13	-	51927357-51927406		AGENCOURT_14360862 NIH_MGC_187 Homo sapiens cDNA clone IMAGE:30405414 5, mRNA sequence					
Homo sapiens	RefSeq	NM_153363.1	ILMN_19049	ZNF679	NM_153363.1	NM_153363.1		168417	23503306	NM_153363.1	ZNF679	NP_699194.1	ILMN_1666420	0003940431	S	997	GAGGAATGTGGCAAAGCTTTTACCTGGTCCTCAACCCTTACTAAACATAG	7	+	63364174-63364223	7q11.21c	Homo sapiens zinc finger protein 679 (ZNF679), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC42415	MGC42415
Homo sapiens	RefSeq	NM_000969.3	ILMN_4986	RPL5	NM_000969.3	NM_000969.3		6125	71772259	NM_000969.3	RPL5	NP_000960.2	ILMN_2087080	0000830609	S	951	GGAGCGGGCTGCTGAGAGCTAAACCCAGCAATTTTCTATGATTTTTTCAG	1	+	93079989-93080010:93080011-93080038	1p22.1c	Homo sapiens ribosomal protein L5 (RPL5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 7772601] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with 5S ribosomal RNA, the smallest RNA constituent of a ribosome [goid 8097] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 7772601] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9465063] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12054647] [evidence IPI]; Interacting selectively with 5S ribosomal RNA, the smallest RNA constituent of a ribosome [goid 8097] [evidence IEA]	MSTP030; MGC117339	MSTP030; MGC117339
Homo sapiens	RefSeq	NM_003509.2	ILMN_26131	HIST1H2AI	NM_003509.2	NM_003509.2		8329	15718713	NM_003509.2	HIST1H2AI	NP_003500.1	ILMN_1663453	0002340370	S	377	GAGCCACCACAAGGCGAAGGGCAAGTAGAAGCCTGGATTAGTTTGCAGCA	6	+	27776353-27776380:27776381-27776402	6p22.1c	Homo sapiens histone cluster 1, H2ai (HIST1H2AI), mRNA.				H2A/c; H2AFC	H2A/c; H2AFC
Homo sapiens	RefSeq	NM_004440.2	ILMN_10492	EPHA7	NM_004440.2	NM_004440.2		2045	32967320	NM_004440.2	EPHA7	NP_004431.1	ILMN_1803637	0003850458	S	4951	GACGGCTATAGAAAAACTCAAATGGATTGCTTCCCAAACCCCTCCCCACC	6	-	94008074-94008123	6q16.1c	Homo sapiens EPH receptor A7 (EPHA7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	EHK3; HEK11	EHK3; HEK11
Homo sapiens	RefSeq	XR_039444.1	ILMN_346763	LOC400750	XR_039444.1	XR_039444.1		400750	169161256	XR_039444.1	LOC400750		ILMN_3289247	0007570021	M	2111	CTGCTTTTCATTAGCAGTTGCTCACATGTCTTTGGACGGGTCAGGAGAAG	1	+	38949299-38949348	1p34.3a	PREDICTED: Homo sapiens misc_RNA (LOC400750), miscRNA.					
Homo sapiens	RefSeq	NM_001004466.1	ILMN_178195	OR10H5	NM_001004466.1	NM_001004466.1		284433	52218843	NM_001004466.1	OR10H5	NP_001004466.1	ILMN_2188384	0000840367	S	898	GTCGCCATGAAGAAGACTTGCTTCACCAAACTCTTTCCACAGAACTGCTG	19	+	15766756-15766805	19p13.12a	Homo sapiens olfactory receptor, family 10, subfamily H, member 5 (OR10H5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR19-26; OR19-25	OR19-26; OR19-25
Homo sapiens	RefSeq	XM_944690.1	ILMN_32767	LOC651465	XM_944690.1	XM_944690.1		651465	88955016	XM_944690.1	LOC651465	XP_949783.1	ILMN_1664513	0004640482	S	61	CAGCTGCAGCCCCTAGACTACGGCCGCCTCGGCAGACAAAGCCGCTGCTC					PREDICTED: Homo sapiens hypothetical protein LOC651465 (LOC651465), mRNA.					
Homo sapiens	RefSeq	NR_031625.1	ILMN_388552	MIR1293	NR_031625.1	NR_031625.1		100302220	269847164	NR_031625.1	MIR1293		ILMN_3308220	0006480400	S	1	GGTTGTTCTGGGTGGTCTGGAGATTTGTGCAGCTTGTACCTGCACAAATC					Homo sapiens microRNA 1293 (MIR1293), microRNA.					
Homo sapiens	RefSeq	NM_001039348.1	ILMN_41104	EFEMP1	NM_001039348.1	NM_001039348.1		2202	86788014	NM_001039348.1	EFEMP1	NP_001034437.1	ILMN_2350634	0006900408	A	1259	ACCGATGTGTTTGCCCAGTCTCAAATGCCATGTGCCGAGAACTGCCCCAG	2	-	56098001-56098050	2p16.1d	Homo sapiens EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10369267] [evidence TAS]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10369267] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12620389] [evidence IPI]	FBNL; MLVT; FLJ35535; FBLN3; DRAD; S1-5; MGC111353; DHRD; MTLV	FBNL; MLVT; FLJ35535; FBLN3; DRAD; S1-5; MGC111353; DHRD; MTLV
Homo sapiens	RefSeq	NM_001010982.1	ILMN_5520	AFMID	NM_001010982.1	NM_001010982.1		125061	58330908	NM_001010982.1	AFMID	NP_001010982.1	ILMN_2095653	0002000497	S	1555	GGCGTGAGCCACTGCGCCCGGCCAGAATGGCATTATATTTAAATAGTTCA	17	+	73715232-73715281	17q25.3b	Homo sapiens arylformamidase (AFMID), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid [goid 6569] [evidence IEA]; The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid [goid 19674] [pmid 14704851] [evidence EXP]	Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine [goid 4061] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KF; DKFZp686F03259	KF; DKFZp686F03259
Homo sapiens	RefSeq	NM_005859.3	ILMN_176084	PURA	NM_005859.3	NM_005859.3		5813	62530389	NM_005859.3	PURA	NP_005850.1	ILMN_2127328	0000050601	S	2062	CGTGCAGCAATTTCCAGTGAACCTGTACTTGGACATCAGGTAGTGAGTCT	5	+	139475953-139476002	5q31.3a	Homo sapiens purine-rich element binding protein A (PURA), mRNA.	The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [pmid 15777841] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9716182] [evidence IDA]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [pmid 15777841] [evidence IDA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [pmid 1545807] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	Interacting selectively with double-stranded telomere-associated DNA [goid 3691] [pmid 15777841] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence ISS]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 9334258] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IEA]	PURALPHA; PUR-ALPHA; PUR1	PURALPHA; PUR-ALPHA; PUR1
Homo sapiens	RefSeq	NM_018097.1	ILMN_15131	CEP27	NM_018097.1	NM_018097.1		55142	8922429	NM_018097.1	CEP27	NP_060567.1	ILMN_1738482	0000840551	S	1256	AGTCATGATCACGCCACTGCGCTACAGCCTGGGCGACACAGTAAGACCCT	15	+	40646836-40646885	15q15.1d	Homo sapiens centrosomal protein 27kDa (CEP27), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]			FLJ10460; C15orf25; HsT17025	FLJ10460; C15orf25; HsT17025
Homo sapiens	RefSeq	XM_934636.1	ILMN_45473	LOC653596	XM_934636.1	XM_934636.1		653596	88953491	XM_934636.1	LOC653596	XP_939729.1	ILMN_1667738	0006660040	I	121	GAAGCCTCAGCAAATGAAAGCAACAGGGTAATTGCTGAGAGAGAGTTAAT	2	-	110771330-110771379		PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 2 (LOC653596), mRNA.					
Homo sapiens	RefSeq	XM_001723007.1	ILMN_334962	LOC100134233	XM_001723007.1	XM_001723007.1		100134233	169169040	XM_001723007.1	LOC100134233	XP_001723059.1	ILMN_3235667	0002680468	S	80	CTTTTACCCCAACATTTACCTCCAGGACCACCAGTAGGCTGACTCCCGGC					PREDICTED: Homo sapiens similar to hCG1789209 (LOC100134233), mRNA.					
Homo sapiens	RefSeq	NM_021969.1	ILMN_30029	NR0B2	NM_021969.1	NM_021969.1		8431	13259502	NM_021969.1	NR0B2	NP_068804.1	ILMN_2220978	0005220253	S	808	TTCCAGCCCAGGCAGAGATCAGGTGGGCAGAGGCTGGCAGTGCTGATTCA	1	-	27110868-27110917	1p36.11a	Homo sapiens nuclear receptor subfamily 0, group B, member 2 (NR0B2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16709599] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 11030331] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 11030331] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 11030331] [evidence TAS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 17686645] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16709599] [evidence IPI]	SHP; SHP1	SHP; SHP1
Homo sapiens	RefSeq	XM_001723914.1	ILMN_348549	LOC100129306	XM_001723914.1	XM_001723914.1		100129306	169206452	XM_001723914.1	LOC100129306	XP_001723966.1	ILMN_3268707	0006040273	M	44	TGGTCAGAGGAGCAAAGGAAAAGAATCCCAAAGTGAAAGGACTGGTTCGG				13q12.13c	PREDICTED: Homo sapiens similar to hCG1644665 (LOC100129306), mRNA.					
Homo sapiens	RefSeq	NM_176795.2	ILMN_11181	HRAS	NM_176795.2	NM_176795.2		3265	47117696	NM_176795.2	HRAS	NP_789765.1	ILMN_1699798	0007160093	I	656	TAGCTCCAGCTCCGGGACCCTCTGGGACCCCCCGGGACCCATGTGACCCA	11	-	523291-523295:523296-523340	11p15.5d	Homo sapiens v-Ha-ras Harvey rat sarcoma viral oncogene homolog (HRAS), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10842192] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9690470] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9880516] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9020890] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7972015] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8493579] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9069260] [evidence EXP]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10848592] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9020890] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10848592] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction [goid 35022] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9219684] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	c-bas/has; RASH1; K-ras; N-ras; CTLO; HRAS1	c-bas/has; RASH1; K-ras; N-ras; CTLO; HRAS1
Homo sapiens	RefSeq	NM_005111.5	ILMN_31472	CRYZL1	NM_145858.2	NM_145858.2		9946	90669510	NM_145858.2	CRYZL1	NP_665857.2	ILMN_1762115	0006060646	A	979	TTGGATCCTCCAGATAGCCACTGCCTTTTCCTCAAGGGAGCAACGTTAGC	21	-	34968092-34968141	21q22.11c	Homo sapiens crystallin, zeta (quinone reductase)-like 1 (CRYZL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + quinone = NADP+ + semiquinone [goid 3960] [pmid 10191096] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	QOH-1; 4P11	QOH-1; 4P11
Homo sapiens	RefSeq	NM_021800.2	ILMN_177844	DNAJC12	NM_021800.2	NM_021800.2		56521	41406092	NM_021800.2	DNAJC12	NP_068572.1	ILMN_2269256	0002450411	I	789	GGAAGAGCAAGACTGTCCCCTATGCTGCCAACATGCAGTCTTTGTTTATG	10	-	69556800-69556849	10q21.3d	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 12 (DNAJC12), transcript variant 1, mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	RP11-57G10.2; JDP1	RP11-57G10.2; JDP1
Homo sapiens	RefSeq	NM_005494.2	ILMN_26714	DNAJB6	NM_005494.2	NM_005494.2		10049	24234719	NM_005494.2	DNAJB6	NP_005485.1	ILMN_2402416	0001230224	A	557	CCGAGGGACGGGGTCGTTTTTCTCTGCGTTCAGTGGATTTCCGTCTTTTG	7	+	156867756-156867805	7q36.3c	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 6 (DNAJB6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10954706] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 10954706] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 11896048] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 11896048] [evidence IDA]; Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [pmid 10954706] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	Functions to increase the rate of ATP hydrolysis [goid 1671] [pmid 11896048] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [pmid 10954706] [evidence IPI]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 11896048] [evidence IDA]	DKFZp566D0824; HSJ-2; MGC117297; HSJ2; MRJ; HHDJ1; FLJ42837; MSJ-1; DnaJ; MGC1152	DKFZp566D0824; HSJ-2; MGC117297; HSJ2; MRJ; HHDJ1; FLJ42837; MSJ-1; DnaJ; MGC1152
Homo sapiens	RefSeq	NM_001008219.1	ILMN_28222	AMY1C	NM_001008219.1	NM_001008219.1		278	56549663	NM_001008219.1	AMY1C	NP_001008220.1	ILMN_1663313	0001820068	S	19	GGTCAGCAGTCTCTGATCCGTGCAGGGTATTAATGTGTCAGGGCTGAGTG	1	+	104093982-104094031	1p21.1c	Homo sapiens amylase, alpha 1C (salivary) (AMY1C), mRNA.				AMY1	AMY1
Homo sapiens	RefSeq	XM_943992.1	ILMN_163868	LOC375190	XR_017944.1	XR_017944.1		375190	113413606	XR_017944.1	LOC375190		ILMN_1714882	0003120482	A	2017	GGTTACAGTCCCACCATTTGTTGATCCTCTGTTTCAAAGACAGCAAGAGG				2p23.3d	PREDICTED: Homo sapiens hypothetical LOC375190 (LOC375190), misc RNA.					
Homo sapiens	RefSeq	XM_925881.1	ILMN_37146	LOC642348	XM_925881.1	XM_925881.1		642348	88994965	XM_925881.1	LOC642348	XP_930974.1	ILMN_1758678	0004250195	S	28	TGGGTCATCACTCTGGAGGGTGCAAGCCATGAGCATTTGTGGCATCCATG	6	-	58809622-58809671		PREDICTED: Homo sapiens hypothetical protein LOC642348 (LOC642348), mRNA.					
Homo sapiens	RefSeq	NM_001003794.1	ILMN_6499	MGLL	NM_001003794.1	NM_001003794.1		11343	51242952	NM_001003794.1	MGLL	NP_001003794.1	ILMN_1707310	0003400546	I	70	CCGCAAACGAGGATCCGCTGCGCTCGGGGAACGCGACAGCGGCGCTCGTG	3	-	129024622-129024671	3q21.3b	Homo sapiens monoglyceride lipase (MGLL), transcript variant 2, mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9495531] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9495531] [evidence TAS]	Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [pmid 9495531] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: H2O + acylglycerol = a fatty acid + glycerol [goid 47372] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGL; HU-K5	MGL; HU-K5
Homo sapiens	RefSeq	XM_946044.1	ILMN_137918	PSMD12	XM_946044.1	XM_946044.1		5718	89042922	XM_946044.1	PSMD12	XP_951137.1	ILMN_1684383	0003440576	I	438	AAGTCTGTTTAAAATGTGTTAAGTCAACGTTGTAACATCCTAGAGGGTGT				17q24.2b	PREDICTED: Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 12, transcript variant 4 (PSMD12), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [pmid 9426256] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	XM_926894.1	ILMN_34914	LOC643590	XM_926894.1	XM_926894.1		643590	89034304	XM_926894.1	LOC643590	XP_931987.1	ILMN_1689128	0004590270	S	241	ACAGGAAAACCATCTCTCTTCTGGCTTCCCCATGTGCTGAGAGATATGTC	11	+	102040174-102040223		PREDICTED: Homo sapiens hypothetical protein LOC643590 (LOC643590), mRNA.					
Homo sapiens	RefSeq	NM_019027.3	ILMN_29593	RBM47	NM_019027.3	NM_019027.3		54502	148833510	NM_019027.3	RBM47	NP_061900.2	ILMN_3306730	0002320576	M	3700	GAGTGCCTACTGAGGCCTTTAAGCACCGCTAACATTCCTTTCCATCATTC	4	-	40426007-40426056	4p14a	Homo sapiens RNA binding motif protein 47 (RBM47), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	DKFZp686F02235; FLJ21344; FLJ20273; FLJ21643	DKFZp686F02235
Homo sapiens	RefSeq	NM_017967.2	ILMN_22393	FLJ20850	NM_017967.2	NM_017967.2		55049	56711301	NM_017967.2	FLJ20850	NP_060437.2	ILMN_1668752	0006130164	S	1893	TAAGTGTTCCCTCTTGCTGCTAGTGCTGCCTGGAGGTTTGGCGGCGGGCA	19	+	18563764-18563813	19p13.11c	Homo sapiens hypothetical protein FLJ20850 (FLJ20850), mRNA.				FLJ37391; FLJ30108; FLJ34606	FLJ37391; FLJ30108; FLJ34606
Homo sapiens	RefSeq	XM_001720717.1	ILMN_335639	LOC100132352	XM_001720717.1	XM_001720717.1		100132352	169184251	XM_001720717.1	LOC100132352	XP_001720769.1	ILMN_3276395	0000360180	M	33	TCTCAGCCATTCAGTGTTTGGGTGAAGACGGAGGCGGGTTCTGGACAGAC	9	+	68116277-68116326	9q12i	PREDICTED: Homo sapiens similar to hCG1989297, transcript variant 1 (LOC100132352), mRNA.					
Homo sapiens	RefSeq	XM_001720717.1	ILMN_335639	LOC100132352	XM_001720717.1	XM_001720717.1		100132352	169184251	XM_001720717.1	LOC100132352	XP_001720769.1	ILMN_3199920	0001300209	A	30	AAATCTCAGCCATTCAGTGTTTGGGTGAAGACGGAGGCGGGTTCTGGACA	9	+	68116274-68116323	9q12i	PREDICTED: Homo sapiens similar to hCG1989297, transcript variant 1 (LOC100132352), mRNA.					
Homo sapiens	RefSeq	NM_145869.1	ILMN_14436	ANXA11	NM_145869.1	NM_145869.1		311	22165432	NM_145869.1	ANXA11	NP_665876.1	ILMN_1807003	0006960594	I	338	TCACAGTTCTGGAGGCTGAGAAGATCGTGAGGCTGCATCTGGCAAGGGCC	10	-	81955151-81955200	10q22.3f	Homo sapiens annexin A11 (ANXA11), transcript variant c, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7508441] [evidence TAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 12577318] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12577318] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7508441] [evidence TAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7508441] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12577318] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	ANX11; CAP50	ANX11; CAP50
Homo sapiens	RefSeq	NM_025202.2	ILMN_14358	EFHD1	NM_025202.2	NM_025202.2		80303	34147386	NM_025202.2	EFHD1	NP_079478.1	ILMN_1779448	0001980484	S	1596	GTATTACAGTAGACCGCTGACGTTCCCAAGTGACAGATCCAGGGCCTTTC	2	+	233255458-233255507	2q37.1c	Homo sapiens EF-hand domain family, member D1 (EFHD1), mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MSTP133; DKFZp781H0842; PP3051; MST133; FLJ13612	MSTP133; DKFZp781H0842; PP3051; MST133; FLJ13612
Homo sapiens	RefSeq	NM_148975.1	ILMN_13722	MS4A4A	NM_148975.1	NM_148975.1		51338	23110994	NM_148975.1	MS4A4A	NP_683876.1	ILMN_2370336	0005890193	A	923	TCCCTGGAACTCAATAACTCATTTCACTGGCTCTTTATCGAGAGTACTAG	11	+	59832420-59832469	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 4 (MS4A4A), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC22311; 4SPAN1; MS4A4; MS4A7; HDCME31P; CD20-L1; CD20L1	MGC22311; 4SPAN1; MS4A4; MS4A7; HDCME31P; CD20-L1; CD20L1
Homo sapiens	RefSeq	NM_016649.3	ILMN_17845	ESF1	NM_016649.3	NM_016649.3		51575	22507381	NM_016649.3	ESF1	NP_057733.2	ILMN_1777555	0003520326	S	2454	AACAAAAGCTATGGAAAAAATCCTTGAGGAGAAGGCCCGGCAAAGAGAAC	20	-	13711449-13711498	20p12.1d	Homo sapiens ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) (ESF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		FLJ20368; C20orf6; ABTAP; bA526K24.1; HDCMC28P	FLJ20368; C20orf6; ABTAP; bA526K24.1; HDCMC28P
Homo sapiens	Unigene	Hs.370423	ILMN_88058	HS.370423	Hs.370423		Hs.370423		50502917	CR622110			ILMN_1873863	0006480398	S	1322	AAATCATCTGGTTCGACATAGTAAGTAACGTGCAGTAAGCCACCACGTCG	3	+	172662416-172662465		full-length cDNA clone CS0DC025YP03 of Neuroblastoma Cot 25-normalized of Homo sapiens (human)					
Homo sapiens	RefSeq	NM_001031734.1	ILMN_19980	FDX1L	NM_001031734.2	NM_001031734.2		112812	115511038	NM_001031734.2	FDX1L	NP_001026904.1	ILMN_1744628	0005090053	A	680	AAGCCCCTGTGAAGGACAACACCCCTGCTTGGGAGAGAGTCCCATGTCCA	19	-	10421003-10421052	19p13.2c	Homo sapiens ferredoxin 1-like (FDX1L), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	MGC19604; MGC74760	MGC74760
Homo sapiens	RefSeq	NM_001010870.1	ILMN_27519	TDRD6	NM_001010870.1	NM_001010870.1		221400	58197557	NM_001010870.1	TDRD6	NP_001010870.1	ILMN_1660261	0003440112	S	6429	GGTGGAAAACAAATTAGGTCTCAGGTTGATGGTGGGGTGTGTTTATAGTG	6	+	46669762-46669811	6p12.3e	Homo sapiens tudor domain containing 6 (TDRD6), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	bA446F17.4; DKFZp781I1148; FLJ43850; NY-CO-45; TDR2	bA446F17.4; DKFZp781I1148; FLJ43850; NY-CO-45; TDR2
Homo sapiens	RefSeq	NM_033191.2	ILMN_7336	KRTAP9-4	NM_033191.2	NM_033191.2		85280	16118228	NM_033191.2	KRTAP9-4	NP_149461.2	ILMN_2209088	0004490411	S	676	TCCTGATTCTCTTTTTCCTTACACTTTGTGGATCATGTGCCAGCTTCGTG	17	+	36660140-36660189	17q21.2a	Homo sapiens keratin associated protein 9-4 (KRTAP9-4), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KRTAP9.4; KAP9.4	KAP9.4; KRTAP9.4
Homo sapiens	RefSeq	NM_033191.2	ILMN_7336	KRTAP9-4	NM_033191.2	NM_033191.2		85280	16118228	NM_033191.2	KRTAP9-4	NP_149461.2	ILMN_1696738	0005910593	S	419	TGCTGCCGCCCAGCCTGCTGTGAGACCACTTGCTTCCAGCCCACCTGTGT	17	+	36659883-36659932	17q21.2a	Homo sapiens keratin associated protein 9-4 (KRTAP9-4), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KRTAP9.4; KAP9.4	KAP9.4; KRTAP9.4
Homo sapiens	RefSeq	XM_938756.1	ILMN_34898	LOC649683	XM_938756.1	XM_938756.1		649683	88988405	XM_938756.1	LOC649683	XP_943849.1	ILMN_1651608	0002710333	S	121	GTCGAATTCTTATCGCAGCTCATAAAATCCTTTATGAAACTGGAAAAAGG					PREDICTED: Homo sapiens similar to CG14085-PB, isoform B (LOC649683), mRNA.					
Homo sapiens	RefSeq	XM_928267.1	ILMN_35953	LOC653270	XM_928267.2	XM_928267.2		653270	113429332	XM_928267.2	LOC653270	XP_933360.1	ILMN_1712272	0003360487	S	1617	TGCCAGTTTTGGGGGACTTCGACCTTTGACTCAATCACTATACCCCTTCC	22	-	19991409-19991458	22q11.21f	PREDICTED: Homo sapiens hypothetical LOC653270 (LOC653270), mRNA.					
Homo sapiens	Unigene	Hs.539945	ILMN_104850	HS.539945	Hs.539945		Hs.539945		23547564	BU689635			ILMN_1845933	0006900577	S	419	TGGGCACTGGGATGGAAAGAATAGCAGTGGAGATGCAGAGGAGAAGCCCG	14	-	70143139-70143188		UI-CF-FN0-aeu-h-17-0-UI.s1 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-aeu-h-17-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002661.1	ILMN_27072	PLCG2	NM_002661.2	NM_002661.2		5336	117320536	NM_002661.2	PLCG2	NP_002652.2	ILMN_1815719	0002480424	S	4007	GGAGAACGTGCCCTATTCACACTCTGGGAAGACGCTAATCTGTGACATCT	16	+	80549161-80549210	16q23.2b-q23.3a	Homo sapiens phospholipase C, gamma 2 (phosphatidylinositol-specific) (PLCG2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9280292] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2841328] [evidence EXP]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15644415] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_198853.1	ILMN_21250	TRIM73	NM_198924.2	NM_198924.2		375593	65285120	NM_198924.2	TRIM73	NP_944606.2	ILMN_1667416	0007000661	S	256	GCCTGGAGGTCTTCAAGGAGTCCCTAATGCTACAGTGCGGCCACTCCTAC	7	+	74866209-74866258	7q11.23d	Homo sapiens tripartite motif-containing 73 (TRIM73), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRIM50B; MGC45477	MGC45440; TRIM50C
Homo sapiens	RefSeq	NM_198924.2	ILMN_21250	TRIM73	NM_198924.2	NM_198924.2		375593	65285120	NM_198924.2	TRIM73	NP_944606.2	ILMN_1790253	0004780577	I	738	CAGGAGCTGCGCCACCCGGTGGACGAGGAGAAGGCCCGCTGCCTGGAGGG	7	+	74872100-74872149	7q11.23d	Homo sapiens tripartite motif-containing 73 (TRIM73), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRIM50B; MGC45477	TRIM50B; MGC45477
Homo sapiens	Unigene	Hs.561844	ILMN_115127	HS.561844	Hs.561844		Hs.561844		27844768	BX101194			ILMN_1818632	0006940047	S	335	CAACCTTAGTTCACAGTGCAGTACCACCCCTCACCTTCCATGACTTGTCC					BX101194 Soares_total_fetus_Nb2HF8_9w Homo sapiens cDNA clone IMAGp998B082580, mRNA sequence					
Homo sapiens	RefSeq	NM_052969.1	ILMN_26587	RPL39L	NM_052969.1	NM_052969.1		116832	16579829	NM_052969.1	RPL39L	NP_443201.1	ILMN_1712413	0006060719	S	186	TTTTCCGCCCGCGCCCCAGGCCCTTGCAGATCGAGATTTGCGTCCTAGAG	3	-	188339722-188339771	3q27.3b	Homo sapiens ribosomal protein L39-like (RPL39L), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 12490704] [evidence NAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12490704] [evidence IEP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	RPL39L1	RPL39L1
Homo sapiens	RefSeq	NM_052969.1	ILMN_26587	RPL39L	NM_052969.1	NM_052969.1		116832	16579829	NM_052969.1	RPL39L	NP_443201.1	ILMN_2108357	0006900672	S	314	CAGACTTGAAAAAGTGGTGTGTGGTTGACTCTGTTTCTCGCCATGTCTTC	3	-	188321774-188321782:188321783-188321810:188328481-188328493	3q27.3b	Homo sapiens ribosomal protein L39-like (RPL39L), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 12490704] [evidence NAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12490704] [evidence IEP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	RPL39L1	RPL39L1
Homo sapiens	RefSeq	NM_032828.1	ILMN_15675	ZNF587	NM_032828.1	NM_032828.1		84914	14249531	NM_032828.1	ZNF587	NP_116217.1	ILMN_1734267	0003140014	S	2894	GCCCACCTCAGCCTCCAGAGTAGCTGGAAATACAGTGCCACCCAGATAGC	19	+	63064620-63064653:63071140-63071155	19q13.43c	Homo sapiens zinc finger protein 587 (ZNF587), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20813; ZF6; UBF-fl; FLJ14710	FLJ20813; ZF6; UBF-fl; FLJ14710
Homo sapiens	RefSeq	NM_052869.1	ILMN_1382	TTYH2	NM_052869.1	NM_052869.1		94015	53988386	NM_052869.1	TTYH2	NP_443101.1	ILMN_2288148	0006510767	I	457	ACTTGTCCAAGGCAACAGAGCTAGGAAGGGGCAGAGCCAGGTTTGAACCC	17	+	69756556-69756605	17q25.1b	Homo sapiens tweety homolog 2 (Drosophila) (TTYH2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	C17orf29; MGC4837; MGC126172	C17orf29; MGC4837; MGC126172
Homo sapiens	RefSeq	NM_194316.1	ILMN_28489	UBE2J2	NM_194316.1	NM_194316.1		118424	37577127	NM_194316.1	UBE2J2	NP_919297.1	ILMN_1693991	0002570066	I	378	TCATCTGCAACTAGGGCAGCCAGAGTGCGGGAGTACATCTGTAGGGTGGG	1	-	1187567-1187616	1p36.33a	Homo sapiens ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) (UBE2J2), transcript variant 5, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]	NCUBE2; PRO2121	NCUBE2; PRO2121
Homo sapiens	RefSeq	NM_001906.4	ILMN_3447	CTRB1	NM_001906.4	NM_001906.4		1504	118498340	NM_001906.4	CTRB1	NP_001897.4	ILMN_2137654	0004850687	S	104	CTCAGCGGCCTGTCCAGGATCGTGAATGGGGAGGACGCCGTCCCCGGCTC	16	+	73814196-73814245	16q23.1a	Homo sapiens chymotrypsinogen B1 (CTRB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2917002] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC88037; CTRB; FLJ42412	MGC88037; CTRB; FLJ42412
Homo sapiens	RefSeq	NM_004236.1	ILMN_30365	COPS2	NM_004236.2	NM_004236.2		9318	141801776	NM_004236.2	COPS2	NP_004227.1	ILMN_1655827	0004890195	S	1337	GGCTTAACAGAGAACAAGCTTTTACAGACGTCCTTAAGGCAACAGTGCAG	15	-	47207394-47207438:47207439-47207443	15q21.1d	Homo sapiens COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) (COPS2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9535219] [evidence IDA]; A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome [goid 8180] [pmid 9535219] [evidence IDA]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7776974] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9535219] [evidence NAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9535219] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17438371] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9535219] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17438371] [evidence IPI]	TRIP15; SGN2; ALIEN; CSN2	TRIP15; SGN2; ALIEN; CSN2
Homo sapiens	RefSeq	NM_152758.3	ILMN_15013	YTHDF3	NM_152758.4	NM_152758.4		253943	116235459	NM_152758.4	YTHDF3	NP_689971.4	ILMN_1657470	0004150240	S	4404	GGGGACCAAAAGGGAGAGAGCCTGGGGTCTACAAGAGGAGACACATCATC	8	+	64124595-64124644	8q12.3b	Homo sapiens YTH domain family, member 3 (YTHDF3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]			FLJ31657	FLJ31657
Homo sapiens	RefSeq	XM_375845.3	ILMN_33111	LOC400807	XM_375845.3	XM_375845.3		400807	88986409	XM_375845.3	LOC400807	XP_375845.2	ILMN_1686847	0006130546	I	1188	CTGGACTCTTGGTCTGTCGTCCAGGATAGAGGGCAGGGATGCCATCACTA	5	+	180795525-180795574		PREDICTED: Homo sapiens hypothetical LOC400807, transcript variant 1 (LOC400807), mRNA.					
Homo sapiens	RefSeq	NM_031937.1	ILMN_26278	TBC1D10A	NM_031937.1	NM_031937.1		83874	13994321	NM_031937.1	TBC1D10A	NP_114143.1	ILMN_1693726	0005360717	S	1556	GGCAGCTAAGGCCTCCAGGGCGGGGTCTCCATATAACTACACGGTTCATG	22	-	30688309-30688358	22q12.2b	Homo sapiens TBC1 domain family, member 10A (TBC1D10A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [pmid 11285285] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11285285] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 11285285] [evidence IPI]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	dJ130H16.2; TBC1D10; dJ130H16.1; EPI64	dJ130H16.2; TBC1D10; dJ130H16.1; EPI64
Homo sapiens	RefSeq	NM_021014.2	ILMN_166263	SSX3	NM_021014.2	NM_021014.2		10214	28559007	NM_021014.2	SSX3	NP_066294.1	ILMN_1690971	0006350431	S	548	AACATGATATCTGGACCCAAAAGGGGGGAACATGCCTGGACCCACAGACT	X	-	48207002-48207039:48209422-48209433	Xp11.23e-p11.23d	Homo sapiens synovial sarcoma, X breakpoint 3 (SSX3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC119054; MGC14495	MGC119054; MGC14495
Homo sapiens	Unigene	Hs.539292	ILMN_104429	HS.539292	Hs.539292		Hs.539292		21757276	AK097494			ILMN_1823582	0001430154	S	1988	AGCATCAACTCTGTGCCTTGCAGACAGCGGACACGTAACACAGCCACGCG					Homo sapiens cDNA FLJ40175 fis, clone TESTI2017035					
Homo sapiens	RefSeq	NM_020703.1	ILMN_24000	AMIGO1	NM_020703.2	NM_020703.2		57463	153791465	NM_020703.2	AMIGO1	NP_065754.2	ILMN_1765460	0004730598	S	2132	GTCTGAGTTGGATGGGAATGAGGAAGGAGTGAGGGGAAGAACAGATTCCC	1	-	110049735-110049784	1p13.3b	Homo sapiens adhesion molecule with Ig-like domain 1 (AMIGO1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 12629050] [evidence ISS]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [pmid 12629050] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [pmid 12629050] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 12629050] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [pmid 12629050] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	AMIGO	AMIGO
Homo sapiens	RefSeq	NM_002695.3	ILMN_21511	POLR2E	NM_002695.3	NM_002695.3		5434	167900476	NM_002695.3	POLR2E	NP_002686.2	ILMN_3239240	0004850280	S	2508	GACGTGCGAAACCTTAGAGCCGGGGGATACGTCCGTCATCGAGAACGTTT	19	-	1086886-1086935	19p13.3i	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide E, 25kDa (POLR2E), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9409616] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 7828586] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 7828586] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7828586] [evidence TAS]	hsRPB5; XAP4; RPABC1; hRPB25; RPB5	hsRPB5; XAP4; RPABC1; hRPB25; RPB5
Homo sapiens	RefSeq	XM_940758.1	ILMN_38393	TMEM76	XM_940758.1	XM_940758.1		138050	89028622	XM_940758.1	TMEM76	XP_945851.1	ILMN_1752998	0001070494	I	514	GAACCGCGGAGAAGGCGGTCAGCTGCTGTGTGGGAAGGTGACAGCTTTTT				8p11.21a	PREDICTED: Homo sapiens transmembrane protein 76 (TMEM76), mRNA.					
Homo sapiens	RefSeq	NM_005143.2	ILMN_16864	HP	NM_005143.2	NM_005143.2		3240	51093872	NM_005143.2	HP	NP_005134.1	ILMN_1812433	0006590131	S	976	GGCATTATGAAGGCAGCACAGTCCCCGAAAAGAAGACACCGAAGAGCCCT	16	+	70652001-70652050	16q22.3a	Homo sapiens haptoglobin (HP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence NAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 7036344] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 30492] [evidence IEA]	hp2-alpha; MGC111141	hp2-alpha; MGC111141
Homo sapiens	RefSeq	XM_931869.1	ILMN_41256	C6ORF184	XM_931869.1	XM_931869.1		221261	88997624	XM_931869.1	C6orf184	XP_936962.1	ILMN_1743399	0004070435	A	257	GGTGACTGGGGAGGAACTGAGGGCATTGAAGAACATTTTTGGCAGCTGGA	6	+	109723561-109723588:109733855-109733876	6q21f	PREDICTED: Homo sapiens chromosome 6 open reading frame 184, transcript variant 2 (C6orf184), mRNA.					
Homo sapiens	RefSeq	NM_002959.4	ILMN_165748	SORT1	NM_002959.4	NM_002959.4		6272	52352810	NM_002959.4	SORT1	NP_002950.3	ILMN_1707077	0000160019	S	6630	GGTCCCCATGTGCCTGTTGTTCAGCCCTCTCTCTTGTTCCCTTTCTGAGC	1	-	109852530-109852579	1p13.3b	Homo sapiens sortilin 1 (SORT1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11331584] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 15992544] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [pmid 11331584] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 10085125] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 9756851] [evidence IDA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 11331584] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [pmid 11331584] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 9756851] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The directed movement of substances from endosomes to lysosomes [goid 8333] [pmid 11331584] [evidence IDA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 14985763] [evidence IMP]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [pmid 18258592] [evidence IMP]; The process whereby a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse [goid 14902] [pmid 18258592] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [pmid 15992544] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of substances from endosomes to lysosomes or vacuoles by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the target compartment [goid 32509] [pmid 11331584] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [pmid 15992544] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 14985763] [evidence IDA]; The directed movement of the hexose monosaccharide glucose into a cell or organelle [goid 46323] [pmid 15992544] [evidence IMP]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [pmid 14985763] [evidence IMP]; Transport of a vesicle from the plasma membrane to the endosome [goid 48227] [pmid 11331584] [evidence IDA]; Any process that stops or reduces the activity of the enzyme lipoprotein lipase [goid 51005] [pmid 10085125] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Combining with nerve growth factor, to block apoptosis in neurons and promote nerve growth, or to initiate a change in cell activity [goid 10465] [pmid 14985763] [evidence IDA]; Interacting selectively with any enzyme [goid 19899] [pmid 10085125] [evidence IPI];  [goid 30379] [pmid 9756851] [evidence IDA]; Interacting selectively with nerve growth factor [goid 48406] [pmid 14985763] [evidence IPI]	NT3; Gp95	NT3; Gp95
Homo sapiens	RefSeq	XM_928045.1	ILMN_33243	LOC644968	XM_928045.1	XM_928045.1		644968	88976638	XM_928045.1	LOC644968	XP_933138.1	ILMN_1795574	0006840315	S	1376	GGTCAGCAGAATGGGCCCACAAAGTTGAGCACACCCTAATCTGTGGAACC	4	+	108959099-108959148		PREDICTED: Homo sapiens hypothetical protein LOC644968 (LOC644968), mRNA.					
Homo sapiens	RefSeq	XM_944665.1	ILMN_34119	LOC654002	XM_944665.1	XM_944665.1		654002	89031990	XM_944665.1	LOC654002	XP_949758.1	ILMN_1703973	0000540181	I	1	CGGGCTGGGGTAGGCGGCAGTGGGGTCCCTGGCTTTGGGGCACTGGGAAG					PREDICTED: Homo sapiens similar to BMS1-like, ribosome assembly protein, transcript variant 3 (LOC654002), mRNA.					
Homo sapiens	RefSeq	NM_004468.3	ILMN_183539	FHL3	NM_004468.3	NM_004468.3		2275	54112384	NM_004468.3	FHL3	NP_004459.2	ILMN_1703558	0004210564	S	1441	AGGTCTCCTATGGGTGCCTGGGAAGTCCTTGAAAGTGGACTGTTCTCAGG	1	-	38462655-38462704	1p34.3b	Homo sapiens four and a half LIM domains 3 (FHL3), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]	The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 10049693] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC23614; SLIM2; MGC8696; MGC19547	MGC23614; SLIM2; MGC8696; MGC19547
Homo sapiens	RefSeq	XR_042356.1	ILMN_335311	LOC727874	XR_042356.1	XR_042356.1		727874	169216610	XR_042356.1	LOC727874		ILMN_3275907	0003940497	M	1596	CACCCAACTTGATTCAGCAACCCAAAGCGGATGATATGAGTGCAGCCACG	X	+	79703896-79703945	Xq21.1c	PREDICTED: Homo sapiens misc_RNA (LOC727874), miscRNA.					
Homo sapiens	RefSeq	NM_144614.2	ILMN_31060	LOC284428	XM_208203.5	XM_208203.5		284428	113428064	XM_208203.5	LOC284428	XP_208203.2	ILMN_1779195	0002060349	S	674	GGGCTTTCGGTCCCTTTCTTTTAATGCCCATCCTCATTCCTACTCTGAAT	19	+	6983917-6983966	19p13.2e	PREDICTED: Homo sapiens similar to methyl-CpG binding domain protein 3-like 2 (LOC284428), mRNA.					
Homo sapiens	RefSeq	XM_208203.4	ILMN_31060	LOC284428	XM_208203.5	XM_208203.5		284428	113428064	XM_208203.5	LOC284428	XP_208203.2	ILMN_1749755	0003170161	S	407	TGAATCTCTGGACAGAGCTGGTGCTGAGCGTGTGCGCATCCCGCTTGAGC	19	+	6983650-6983699	19p13.2e	PREDICTED: Homo sapiens similar to methyl-CpG binding domain protein 3-like 2 (LOC284428), mRNA.					
Homo sapiens	RefSeq	XM_001718637.1	ILMN_334980	LOC100129213	XM_001718637.1	XM_001718637.1		100129213	169201933	XM_001718637.1	LOC100129213	XP_001718689.1	ILMN_3253120	0000730437	M	1730	GAATAGAAGAAGGTTACCAGAGGCTGGGAAGGGTAGTGGGGTGGTAGGGG				10p12.33b	PREDICTED: Homo sapiens hypothetical protein LOC100129213 (LOC100129213), mRNA.					
Homo sapiens	RefSeq	NM_145042.2	ILMN_12774	MGC16703	NM_145042.2	NM_145042.2		113691	34147705	NM_145042.2	MGC16703	NP_659479.2	ILMN_2050434	0006860661	S	1652	GTGGCAGACACCTGTGGTCCCAGCTATTCGGGAGGCTGAGGCAGGAGGAT	22	-	19692608-19692657	22q11.21e	Homo sapiens alpha tubulin-like (MGC16703), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_012300.2	ILMN_182942	FBXW11	NM_012300.2	NM_012300.2		23291	48928049	NM_012300.2	FBXW11	NP_036432.2	ILMN_1766983	0002350687	I	418	GTTCTGTGCCAAGGTCTTTGTGGCTAGGCTGCGCCAACCTGGTAGAGAGC	5	-	171384651-171384700	5q35.1d-q35.1e	Homo sapiens F-box and WD repeat domain containing 11 (FBXW11), transcript variant 3, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15070733] [evidence IPI]	BTRC2; FBW1B; KIAA0696; BTRCP2; Fbw11; FBXW1B; Hos	BTRC2; FBW1B; KIAA0696; BTRCP2; Fbw11; FBXW1B; Hos
Homo sapiens	RefSeq	XM_497498.2	ILMN_37394	LOC441759	XM_497498.2	XM_497498.2		441759	88952331	XM_497498.2	LOC441759	XP_497498.2	ILMN_1718166	0000450239	S	1	ATGTCGAACATAGGATCAAGCTTGGAAGAAGACGTGCTGGCGCCCGGGGC					PREDICTED: Homo sapiens similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (LOC441759), mRNA.					
Homo sapiens	RefSeq	NM_178841.2	ILMN_20723	RNF166	NM_178841.2	NM_178841.2		115992	31343485	NM_178841.2	RNF166	NP_849163.1	ILMN_1695356	0004280348	S	1544	GTTTCTCTTTGATGACCAGGAAGAAATCCCAGCACCCCAGCCACAGGCTG	16	-	88763170-88763219	16q24.3a	Homo sapiens ring finger protein 166 (RNF166), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC14381; MGC2647	MGC14381; MGC2647
Homo sapiens	Unigene	Hs.560576	ILMN_114333	HS.560576	Hs.560576		Hs.560576		19391305	BM932132			ILMN_1827449	0007100358	S	574	TGAGGAGGTCTCACAAGCCTAAGTGGGGCAAGTTGGGGAGCTAAGGCAGT	17_random	-	677592-677641		UI-E-EJ1-ajl-n-15-0-UI.r1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajl-n-15-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_003176.2	ILMN_18047	SYCP1	NM_003176.2	NM_003176.2		6847	34878903	NM_003176.2	SYCP1	NP_003167.2	ILMN_1756374	0000580543	S	3002	GGCCCCTTCATCTCTAACAACCCCTGGATCTACACTGAAGTTTGGAGCTA	1	+	115338931-115338931:115339026-115339074	1p13.2a	Homo sapiens synaptonemal complex protein 1 (SYCP1), mRNA.	A structural unit of the synaptonemal complex found between the lateral elements [goid 801] [evidence IEA]; A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them [goid 802] [evidence IEA]; A structural unit of the synaptonemal complex found between the lateral elements [goid 801] [evidence IEA]; A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them [goid 802] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [pmid 15944401] [evidence ISS]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 1464329] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 1464329] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1464329] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15944401] [evidence ISS]	MGC104417; HOM-TES-14; SCP1	MGC104417; HOM-TES-14; SCP1
Homo sapiens	RefSeq	XM_001717645.1	ILMN_347278	LOC727994	XM_001717645.1	XM_001717645.1		727994	169208466	XM_001717645.1	LOC727994	XP_001717697.1	ILMN_3251599	0003520414	S	300	GTAAGAGCCCCCAGGCTCAGCCATGGAGACCTTGAGCAGTGGCACTGAGT	15	-	82662418-82662467	15q25.2b	PREDICTED: Homo sapiens similar to colon cancer-associated antigen AgSK1-2HT-ECS (LOC727994), mRNA.					
Homo sapiens	Unigene	Hs.565029	ILMN_117585	HS.565029	Hs.565029		Hs.565029		6991942	AW451166			ILMN_1848915	0005270369	S	99	TAGCTCCTTCTGGAGGGGTGAGGGGTGTGGGGTGTGGATCTCATGGGAAT					UI-H-BI3-alb-c-06-0-UI.s1 NCI_CGAP_Sub5 Homo sapiens cDNA clone IMAGE:2736011 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003179.2	ILMN_30143	SYP	NM_003179.2	NM_003179.2		6855	56699493	NM_003179.2	SYP	NP_003170.1	ILMN_1701483	0006040433	S	2215	GCCTGGTCTGGAGCCCCTATCCTGCACCCTCTGCTATGTCTGTGATGTCA	X	-	49044433-49044482	Xp11.23b	Homo sapiens synaptophysin (SYP), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [pmid 1975480] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [pmid 10620806] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the membrane surrounding a synaptic vesicle [goid 48499] [pmid 10620806] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10620806] [evidence NAS]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [pmid 10620806] [evidence IDA]		
Homo sapiens	RefSeq	NM_002564.2	ILMN_26477	P2RY2	NM_002564.2	NM_002564.2		5029	28872719	NM_002564.2	P2RY2	NP_002555.2	ILMN_2372915	0004150408	A	2034	CCCATCTGGAGGCTCCCATGGGCTAGGAGCCAGTGTGAGGCTGTAACTTA	11	+	72624553-72624602	11q13.4b	Homo sapiens purinergic receptor P2Y, G-protein coupled, 2 (P2RY2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8159738] [evidence TAS]	The regulation of the levels, transport, and metabolism of ions within a cell or between a cell and its external environment [goid 6873] [pmid 8159738] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 8159738] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7779087] [evidence TAS]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y2R; P2Y2; P2U; MGC40010; P2U1; P2UR; MGC20088; HP2U; P2RU1	P2U; MGC40010; P2RU1; P2Y2R; P2Y2; P2U1; P2UR; MGC20088; HP2U
Homo sapiens	RefSeq	XM_001719257.1	ILMN_340271	LOC100130520	XM_001719257.1	XM_001719257.1		100130520	169211989	XM_001719257.1	LOC100130520	XP_001719309.1	ILMN_3182768	0000430328	A	628	CCTTGGACAGAGTCATGAACAGGAGAACTTGCAACACCCCATGCCCATTG				17q25.1b	PREDICTED: Homo sapiens similar to immune receptor expressed on myeloid cells 2 (LOC100130520), mRNA.					
Homo sapiens	RefSeq	NM_013292.2	ILMN_26597	MYLPF	NM_013292.3	NM_013292.3		29895	142378144	NM_013292.3	MYLPF	NP_037424.2	ILMN_1759962	0006840092	S	371	GGTCTTGGACCCTGAGGGAAAGGGCACCATCAAGAAGAAGTTCCTGGAGG	16	+	30295479-30295520:30296476-30296483	16p11.2d	Homo sapiens myosin light chain, phosphorylatable, fast skeletal muscle (MYLPF), mRNA.	A filament of myosin found in a muscle cell of any type [goid 5859] [pmid 6179945] [evidence TAS]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence ISS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 6091059] [evidence TAS]	DKFZp779C0757; MGC13450; MRLC2	DKFZp779C0757; MGC13450; MRLC2
Homo sapiens	RefSeq	NM_178525.2	ILMN_5881	MGC33407	NM_178525.2	NM_178525.2		284382	31341825	NM_178525.2	MGC33407	NP_848620.1	ILMN_1656193	0004590184	S	1065	TCTCCACCATGGCCAAGCAGAGTCTCCGCAAGTTGTCACTGGAGATGCGC	19	-	8669058-8669107	19p13.2d	Homo sapiens hypothetical protein MGC33407 (MGC33407), mRNA.				HSD21	HSD21
Homo sapiens	RefSeq	NM_025010.2	ILMN_27249	KLHL18	NM_025010.3	NM_025010.3		23276	144922686	NM_025010.3	KLHL18	NP_079286.2	ILMN_1655608	0004050239	S	4307	AACAAGGAGATAGGGTAGACATTGTACTCAGTGGGCCTTGGGGCCTAGCC	3	+	47363001-47363050	3p21.31g	Homo sapiens kelch-like 18 (Drosophila) (KLHL18), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ13703; KIAA0795	FLJ13703; KIAA0795
Homo sapiens	RefSeq	NM_183075.2	ILMN_162774	CYP2U1	NM_183075.2	NM_183075.2		113612	62952504	NM_183075.2	CYP2U1	NP_898898.1	ILMN_2097259	0004390541	S	4318	CAGTGTGGATTACACTGTACCTTGGGCGGGAGAGTTTGTTCTTGATATGG	4	+	108874179-108874228	4q25b	Homo sapiens cytochrome P450, family 2, subfamily U, polypeptide 1 (CYP2U1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	P450TEC	P450TEC
Homo sapiens	RefSeq	NM_198097.1	ILMN_8655	C7ORF28B	NM_198097.2	NM_198097.2		221960	141802123	NM_198097.2	C7orf28B	NP_932765.1	ILMN_1713322	0003310136	I	777	TACCACCTCCCTTTTCCCAAGGCACATCGAACCTGAGTTAGCAGGAAGGG	7	-	6852655-6852668:6854395-6854430	7p22.1a	Homo sapiens chromosome 7 open reading frame 28B (C7orf28B), mRNA.				H_NH0577018.2; MGC19819; DKFZP586I1023	H_NH0577018.2; MGC19819; DKFZP586I1023
Homo sapiens	RefSeq	XM_001724763.1	ILMN_334099	LOC728607	XM_001724763.1	XM_001724763.1		728607	169167031	XM_001724763.1	LOC728607	XP_001724815.1	ILMN_3297104	0000020189	M	379	ATATCCTGTTCCCCCTCTCCATCCCAGGTTCAGGGTCTGAGGAGGCTGTG				4q24b	PREDICTED: Homo sapiens similar to mannosidase, beta A, lysosomal-like (LOC728607), mRNA.					
Homo sapiens	RefSeq	NM_000252.1	ILMN_180496	MTM1	NM_000252.1	NM_000252.1		4534	4557895	NM_000252.1	MTM1	NP_000243.1	ILMN_1686985	0002320537	S	2700	GTCAGTCCAGCTCATCTGCCAAAATGTAGGGCTACCGTCTTGGATGCATG	X	+	149591560-149591609	Xq28c	Homo sapiens myotubularin 1 (MTM1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [pmid 18029348] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [pmid 18029348] [evidence IDA]	The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9828128] [evidence NAS]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 9828128] [evidence NAS]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 9828128] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CNM; XLMTM; MTMX	CNM; XLMTM; MTMX
Homo sapiens	RefSeq	XM_290597.6	ILMN_307014	GXYLT1	NM_001099650.1	NM_001099650.1		283464	153791275	NM_001099650.1	GXYLT1	NP_001093120.1	ILMN_1747183	0007330131	A	6969	GCCGTAACAGAAGATCTGTGAAGAGGATGGTGGTTTGCACCTGTTCCTGA	12	-	42476024-42476073	12q12e	Homo sapiens glucoside xylosyltransferase 1 (GXYLT1), transcript variant 2, mRNA.				FLJ43151	
Homo sapiens	RefSeq	NR_029945.1	ILMN_388902	MIR423	NR_029945.1	NR_029945.1		494335	262205344	NR_029945.1	MIR423		ILMN_3308053	0003420431	S	16	TGAGGGGCAGAGAGCGAGACTTTTCTATTTTCCAAAAGCTCGGTCTGAGG				17q11.2c	Homo sapiens microRNA 423 (MIR423), microRNA.					
Homo sapiens	RefSeq	NM_002621.1	ILMN_24742	CFP	NM_002621.1	NM_002621.1		5199	4505736	NM_002621.1	CFP	NP_002612.1	ILMN_1658121	0006580750	S	1459	TCTGCACACCCTTGCTCCCCAAGTACCCGCCCACCGTTTCCATGGTCGAA	X	-	47368761-47368783:47370401-47370427	Xp11.23f	Homo sapiens complement factor properdin (CFP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 15199963] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8530058] [evidence TAS]	Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [pmid 162484] [evidence EXP]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 8530058] [evidence TAS]		PFC; PROPERDIN; BFD; PFD	PFC; BFD; PROPERDIN; PFD
Homo sapiens	RefSeq	NM_015722.3	ILMN_16091	CALY	NM_015722.3	NM_015722.3		50632	166064002	NM_015722.3	CALY	NP_056537.1	ILMN_3238986	0000060301	S	522	AAGATCTGCACGCCGCTGACCCTGGAGATGTACTACACGGAGATGGACCC	10	-	135139571-135139620	10q26.3f	Homo sapiens calcyon neuron-specific vesicular protein (CALY), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 14534309] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [pmid 14534309] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [pmid 16595675] [evidence IDA]	The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of endocytosis [goid 45807] [pmid 16595675] [evidence IMP]; The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [pmid 16595675] [evidence IDA]	Interacting selectively with a clathrin light chain [goid 32051] [pmid 16595675] [evidence IDA]; Interacting selectively with a dopamine receptor [goid 50780] [evidence IEA]	DRD1IP; RP11-122K13.5	RP11-122K13.5
Homo sapiens	RefSeq	XM_943005.1	ILMN_31082	LOC642236	XM_943005.1	XM_943005.1		642236	88957326	XM_943005.1	LOC642236	XP_948098.1	ILMN_1685125	0006270736	I	179	GCCCGAGGTTGACTGTACATACAAATATTGAGCATTTCCTCCTGGTCTCC				9q12h	PREDICTED: Homo sapiens similar to FRG1 protein (FSHD region gene 1 protein), transcript variant 8 (LOC642236), mRNA.					
Homo sapiens	RefSeq	XM_001720498.1	ILMN_341698	LOC729278	XM_001720498.1	XM_001720498.1		729278	169172774	XM_001720498.1	LOC729278	XP_001720550.1	ILMN_3240989	0005290528	S	19	GCTGCAGCAGCCCCGCTGGAAGCGATGCAGCATCCAGAACGACGGAGGAA	8	-	7131205-7131254	8p23.1f	PREDICTED: Homo sapiens hypothetical LOC729278 (LOC729278), mRNA.					
Homo sapiens	RefSeq	XM_378399.3	ILMN_32267	LOC400099	XM_378399.4	XM_378399.4		400099	113424111	XM_378399.4	LOC400099	XP_378399.2	ILMN_1656939	0007200148	S	371	CGCCGCGGGGTATTAATCCCGGGTCGGTGGGAGCCTCCGGAGGCTGCTCT	13	+	19335515-19335564	13q12.11a	PREDICTED: Homo sapiens hypothetical LOC400099 (LOC400099), mRNA.					
Homo sapiens	RefSeq	XM_938769.1	ILMN_172606	NAT1	XM_001127234.1	XM_001127234.1		9	113420301	XM_001127234.1	NAT1	XP_001127234.1	ILMN_1708402	0002350095	I	1782	GAACATGAGCTTTTCTTGTGTAGATCTGAGTTGAAATCCTGTGGACACTG				8p22a	PREDICTED: Homo sapiens N-acetyltransferase 1 (arylamine N-acetyltransferase) (NAT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1559981] [evidence EXP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [pmid 10908296] [evidence TAS]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_938769.1	ILMN_172606	NAT1	XM_001127234.1	XM_001127234.1		9	113420301	XM_001127234.1	NAT1	XP_001127234.1	ILMN_1688071	0006290452	A	625	TTGGTTTTGAGACCACGATGTTGGGAGGGTATGTTTACAGCACTCCAGCC				8p22a	PREDICTED: Homo sapiens N-acetyltransferase 1 (arylamine N-acetyltransferase) (NAT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1559981] [evidence EXP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: acetyl-CoA + an arylamine = CoA + an N-acetylarylamine [goid 4060] [pmid 10908296] [evidence TAS]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_942128.1	ILMN_39758	FLJ31813	XM_942128.1	XM_942128.1		326332	89063218	XM_942128.1	FLJ31813	XP_947221.1	ILMN_1655136	0005570154	S	12	TGCCAAAGCTGTTCCAAATTTTGAAGAGATGTTTGCTAGTAGATTCGCAG					PREDICTED: Homo sapiens hypothetical protein FLJ31813 (FLJ31813), mRNA.					
Homo sapiens	RefSeq	XM_940149.1	ILMN_139257	STEAP1	XM_940149.1	XM_940149.1		26872	89026216	XM_940149.1	STEAP1	XP_945242.1	ILMN_1772260	0004040608	I	220	TTGAGAGGAAACTGGGAGAGGCCGGAGTGCGACTTGGGGAGTCTTAGCCT				7q21.13b	PREDICTED: Homo sapiens six transmembrane epithelial antigen of the prostate 1 (STEAP1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10588738] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10588738] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 10588738] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10588738] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [pmid 10588738] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]		
Homo sapiens	RefSeq	XM_940149.1	ILMN_139257	STEAP1	XM_940149.1	XM_940149.1		26872	89026216	XM_940149.1	STEAP1	XP_945242.1	ILMN_1705629	0007210400	A	412	GGCAGCAGCGGCAGCCGAGACTCACGGTGGCTGAAGCCATACTATTTTAT				7q21.13b	PREDICTED: Homo sapiens six transmembrane epithelial antigen of the prostate 1 (STEAP1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10588738] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10588738] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 10588738] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10588738] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [pmid 10588738] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]		
Homo sapiens	RefSeq	NM_001007560.1	ILMN_14882	C14ORF70	NM_001007560.1	NM_001007560.1		283601	56090621	NM_001007560.1	C14orf70	NP_001007561.1	ILMN_1670143	0007610463	S	1443	TGTCCTCTTGGGAACAGCCCTCAGCCAGCAGTGAGCCCTTAGGAGGATGC	14	+	100208650-100208699	14q32.2b	Homo sapiens chromosome 14 open reading frame 70 (C14orf70), mRNA.					
Homo sapiens	RefSeq	NM_000899.3	ILMN_172829	KITLG	NM_000899.3	NM_000899.3		4254	59939901	NM_000899.3	KITLG	NP_000890.1	ILMN_2341595	0005090500	A	4981	CTGTTAAACTAAAAACCACACCGTTTTCCAGTACTTGATCTCTGAGCTAC	12	-	88886970-88887019	12q21.32a	Homo sapiens KIT ligand (KITLG), transcript variant b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10049787] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2208279] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2208279] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 9722506] [evidence IDA]	Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IEA]; Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence NAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 10884405] [evidence IPI]	DKFZp686F2250; SCF; SF; MGF; KL-1; Kitl	SCF; MGF; Kitl; DKFZp686F2250; SF; KL-1
Homo sapiens	RefSeq	NM_000899.3	ILMN_172829	KITLG	NM_000899.3	NM_000899.3		4254	59939901	NM_000899.3	KITLG	NP_000890.1	ILMN_1808508	0003990670	A	4019	GGCATGGTGGGATGGATGTTGCAAAAGATATCCGGAGCCTCCAGTCTGTC	12	-	88887932-88887981	12q21.32a	Homo sapiens KIT ligand (KITLG), transcript variant b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10049787] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2208279] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2208279] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 9722506] [evidence IDA]	Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IEA]; Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence NAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 10884405] [evidence IPI]	DKFZp686F2250; SCF; SF; MGF; KL-1; Kitl	SCF; MGF; Kitl; SHEP7; DKFZp686F2250; SF; KL-1
Homo sapiens	RefSeq	NM_000899.3	ILMN_172829	KITLG	NM_000899.3	NM_000899.3		4254	59939901	NM_000899.3	KITLG	NP_000890.1	ILMN_1746232	0006900296	I	733	ATGTTACCCCCTGTTGCAGCCAGCTCCCTTAGGAATGACAGCAGTAGCAG	12	-	88909315-88909364	12q21.32a	Homo sapiens KIT ligand (KITLG), transcript variant b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10049787] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2208279] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2208279] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 9722506] [evidence IDA]	Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence IEA]; Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence NAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 10884405] [evidence IPI]	DKFZp686F2250; SCF; SF; MGF; KL-1; Kitl	SCF; MGF; Kitl; SHEP7; DKFZp686F2250; SF; KL-1
Homo sapiens	RefSeq	NM_001012633.1	ILMN_17936	IL32	NM_001012633.1	NM_001012633.1		9235	61658633	NM_001012633.1	IL32	NP_001012651.1	ILMN_2368530	0003440754	A	355	CGACTTCAAAGAGGGCTACCTGGAGACAGTGGCGGCTTATTATGAGGAGC	16	+	3058184-3058233	16p13.3d	Homo sapiens interleukin 32 (IL32), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1729377] [evidence TAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 1729377] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1729377] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 1729377] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	IL-32alpha; TAIFd; IL-32beta; TAIFc; TAIF; IL-32gamma; TAIFb; TAIFa; IL-32delta; NK4	IL-32alpha; TAIFd; IL-32beta; TAIFc; TAIF; IL-32gamma; TAIFb; TAIFa; IL-32delta; NK4
Homo sapiens	RefSeq	NM_015316.1	ILMN_13872	PPP1R13B	NM_015316.2	NM_015316.2		23368	121114286	NM_015316.2	PPP1R13B	NP_056131.2	ILMN_1748831	0003420228	S	4891	ATGGCCGCTGCCAGCCCAGACGCTGCTGACGCTGTGTAAATGTGCACAAT	14	-	104200106-104200155	14q32.33a	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 13B (PPP1R13B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11684014] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15782125] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11684014] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 14729977] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14729977] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11684014] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14729977] [evidence IPI]	p53BP2-like; p85; KIAA0771; ASPP1	p53BP2-like; p85; KIAA0771; ASPP1
Homo sapiens	RefSeq	NM_152486.2	ILMN_17141	SAMD11	NM_152486.2	NM_152486.2		148398	76881818	NM_152486.2	SAMD11	NP_689699.2	ILMN_2195138	0002340431	S	1617	TATGCCGTCAGCCCCTACTTCCACACAGGCGCGGTAGGGGGACTCTCCAT	1	+	867889-867938	1p36.33b	Homo sapiens sterile alpha motif domain containing 11 (SAMD11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC45873	MGC45873
Homo sapiens	RefSeq	NM_152486.2	ILMN_17141	SAMD11	NM_152486.2	NM_152486.2		148398	76881818	NM_152486.2	SAMD11	NP_689699.2	ILMN_1709067	0000520239	S	2049	CAAACTTCACCCAAGCAGGAGAATGGGACCTTGGCTCTACTTCCAGGGGC	1	+	868515-868564	1p36.33b	Homo sapiens sterile alpha motif domain containing 11 (SAMD11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC45873	MGC45873
Homo sapiens	RefSeq	XM_940728.1	ILMN_32121	LOC651554	XM_940728.1	XM_940728.1		651554	88952645	XM_940728.1	LOC651554	XP_945821.1	ILMN_1669759	0000050059	S	121	GTTGATGAATGTGGCTACACTGAACAACAGATTTTCAGTGTAGATGAAAC					PREDICTED: Homo sapiens hypothetical protein LOC651554 (LOC651554), mRNA.					
Homo sapiens	RefSeq	NM_033301.1	ILMN_29819	RPL8	NM_033301.1	NM_033301.1		6132	15431305	NM_033301.1	RPL8	NP_150644.1	ILMN_1764721	0003060477	A	619	GCTGGAGGTGGCCGAATTGACAAACCCATCTTGAAGGCTGGCCGGGCGTA	8	-	146015797-146015846	8q24.3h	Homo sapiens ribosomal protein L8 (RPL8), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 7506540] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 7506540] [evidence TAS]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]		
Homo sapiens	RefSeq	NM_033301.1	ILMN_29819	RPL8	NM_033301.1	NM_033301.1		6132	15431305	NM_033301.1	RPL8	NP_150644.1	ILMN_1811433	0001050709	I	6	ATGGGCAGTATCCGCCGCCATCCTCTTCCGTGAGGCGCGCTGAGACCCGG	8	-	146017674-146017723	8q24.3h	Homo sapiens ribosomal protein L8 (RPL8), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 7506540] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 7506540] [evidence TAS]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]		
Homo sapiens	RefSeq	NM_003132.2	ILMN_2445	SRM	NM_003132.2	NM_003132.2		6723	63253297	NM_003132.2	SRM	NP_003123.2	ILMN_1661337	0005570088	S	1083	GACCTCCTGCTGGCTCTCGCCCACCAACCAAGTGTTACAAGCCCCAGAAT	1	-	11114789-11114838	1p36.22b	Homo sapiens spermidine synthase (SRM), mRNA.		The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane [goid 8295] [evidence IEA]	Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine [goid 4766] [pmid 2069720] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SRML1; SPDSY; PAPT; SPS1	SRML1; SPDSY; PAPT; SPS1
Homo sapiens	RefSeq	NM_005975.2	ILMN_26471	PTK6	NM_005975.2	NM_005975.2		5753	27886594	NM_005975.2	PTK6	NP_005966.1	ILMN_1764508	0007200020	S	1922	TGGTCTCTGCCAGCCCAAGCATCACTGCCCGAGGCGCCAGCTCAGTTTCA	20	-	62160313-62160362	20q13.33e	Homo sapiens PTK6 protein tyrosine kinase 6 (PTK6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8036022] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 8036022] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ42088; BRK	FLJ42088; BRK
Homo sapiens	RefSeq	NM_015012.1	ILMN_8205	TMEM41B	NM_015012.1	NM_015012.1		440026	66392189	NM_015012.1	TMEM41B	NP_055827.1	ILMN_1678004	0001230546	S	1431	CACAAGAAGACAAGCATCTGTGGTGCGGAGGCAAGCAGGCTAACTAGGAG	11	-	9258921-9258970	11p15.4a	Homo sapiens transmembrane protein 41B (TMEM41B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC33897; KIAA0033; MGC57262	MGC33897; KIAA0033; MGC57262
Homo sapiens	RefSeq	NM_014976.1	ILMN_17000	PDCD11	NM_014976.1	NM_014976.1		22984	70980548	NM_014976.1	PDCD11	NP_055791.1	ILMN_3236503	0001030022	S	6207	GGGACAGGAGGACAAATTCAGAGCCCAGAGGGGGAAATGGAGAAACCTGG	10	+	105182806-105182855	10q24.33a	Homo sapiens programmed cell death 11 (PDCD11), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14624448] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 14624448] [evidence IPI]	KIAA0185; ALG-4; NFBP	KIAA0185; ALG-4; NFBP
Homo sapiens	RefSeq	XM_941763.1	ILMN_172211	LOC732450	XM_001133884.1	XM_001133884.1		732450	113430949	XM_001133884.1	LOC732450	XP_001133884.1	ILMN_1724017	0006270711	S	241	GCATTGAAGGCTATCTGTGACAAGGAAGATTCTGTTCCGAATATGGCCAC					PREDICTED: Homo sapiens similar to protein immuno-reactive with anti-PTH polyclonal antibodies (LOC732450), mRNA.					
Homo sapiens	Unigene	Hs.564676	ILMN_117296	HS.564676	Hs.564676		Hs.564676		6704961	AW298401			ILMN_1840464	0006580687	S	329	CTGAGAGTCATCTAGGAGAATAGCAGAGTGTGCAAGTGTAGGGAAAGCCA	14	+	65581337-65581386		UI-H-BW0-ajj-h-10-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2732035 3, mRNA sequence					
Homo sapiens	Unigene	Hs.456944	ILMN_93994	HS.456944	Hs.456944		Hs.456944		45945997	BC068274			ILMN_1876629	0004880707	S	1633	GGCTTAAAGAGACCGAAGCCCCGTAACAACCAAATGCAATGTGTGGGCCG	2	+	174599886-174599935		Homo sapiens cDNA clone IMAGE:5172149, partial cds					
Homo sapiens	RefSeq	XM_372213.4	ILMN_31347	USP27X	XM_937860.2	XM_937860.2		389856	113430423	XM_937860.2	USP27X	XP_942953.2	ILMN_1704377	0003710082	A	1143	CCTCACGGACTGCTTGCGGAGGTTTACGAGGCCAGAGCACTTAGGAAGCA				Xp11.23a	PREDICTED: Homo sapiens ubiquitin specific peptidase 27, X-linked (USP27X), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_001722456.1	ILMN_342267	LOC100129623	XM_001722456.1	XM_001722456.1		100129623	169166571	XM_001722456.1	LOC100129623	XP_001722508.1	ILMN_3184950	0002450523	A	444	GGGAACAGGGCTCAGGGTGGAGATGGCATGCAATTCCCAACACACTTGGT				4p16.1f	PREDICTED: Homo sapiens hypothetical protein LOC100129623 (LOC100129623), mRNA.					
Homo sapiens	RefSeq	NR_003377.2	ILMN_308811	PDZK1P1	NR_003377.2	NR_003377.2		728939	153792553	NR_003377.2	PDZK1P1		ILMN_3243598	0001070598	S	2690	CCTAAACTCTGCAGGCTGGCTAAAGGTACAGAAGGGCGGTCCTGCTGACT	1	-	145926387-145926412:145927114-145927137	1q21.1b-q21.1c	Homo sapiens PDZ domain containing 1 pseudogene 1 (PDZK1P1), non-coding RNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_940697.1	ILMN_137116	SAMD6	XM_940697.1	XM_940697.1		203286	89030498	XM_940697.1	SAMD6	XP_945790.1	ILMN_1802231	0006980563	I	207	CAGGGCCGTGATCTGCTGCTCATTCGTGTTTTGTTGGCAAGATCTGTCTC				9q22.33c	PREDICTED: Homo sapiens sterile alpha motif domain containing 6, transcript variant 2 (SAMD6), mRNA.					
Homo sapiens	RefSeq	XM_497352.2	ILMN_43668	LOC283412	XM_938790.2	XM_938790.2		283412	113417036	XM_938790.2	LOC283412	XP_943883.1	ILMN_1675460	0004250392	S	337	TTGCCCACCCCAAGCTTGGGAAGCGTGTTTGTGCCTGTATTGCCAAGGGG				5p12b	PREDICTED: Homo sapiens similar to 60S ribosomal protein L29 (Cell surface heparin-binding protein HIP) (LOC283412), mRNA.					
Homo sapiens	RefSeq	NM_145166.2	ILMN_174497	ZBTB47	NM_145166.2	NM_145166.2		92999	38569485	NM_145166.2	ZBTB47	NP_660149.1	ILMN_1699440	0000990703	S	4013	GCTCATGCTGCCATAGTCTCCACGGTGCCCTTCACAGAGGGCTTGGTAGT	3	+	42683889-42683938	3p22.1a	Homo sapiens zinc finger and BTB domain containing 47 (ZBTB47), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF651; DKFZp434N0615; KIAA1190	ZNF651; DKFZp434N0615; KIAA1190
Homo sapiens	RefSeq	NM_001006121.1	ILMN_8873	RBMY1B	NM_001006121.1	NM_001006121.1		378948	54633343	NM_001006121.1	RBMY1B	NP_001006121.1	ILMN_1716960	0006400019	S	68	TGAGGGCCAGGCGAACCTCAGGCTCTTTGTCCTACTAAAAAGCGCAGGTA	Y	+	22082713-22082762	Yq11.223a	Homo sapiens RNA binding motif protein, Y-linked, family 1, member B (RBMY1B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	XM_932202.1	ILMN_42409	LOC644472	XM_932202.1	XM_932202.1		644472	89034050	XM_932202.1	LOC644472	XP_937295.1	ILMN_1793872	0003710259	S	72	AGATTCTGGAGGAGCCAATGACCCTGGGCCGCGCGCTATTTCCTCCTGCC	11	+	63291000-63291024:63292902-63292926	11q13.1a	PREDICTED: Homo sapiens hypothetical protein LOC644472 (LOC644472), mRNA.					
Homo sapiens	RefSeq	XM_941093.1	ILMN_173994	C14ORF73	NM_001077594.1	NM_001077594.1		91828	117938265	NM_001077594.1	C14orf73	NP_001071062.1	ILMN_1773017	0002060315	A	2402	AGAAGGAGCAGCCGTGCAGGAGGCATTTCAGGCATCGTTGAGGGGAGTGT	14	+	102646470-102646519	14q32.32b	Homo sapiens chromosome 14 open reading frame 73 (C14orf73), mRNA.					
Homo sapiens	RefSeq	NM_001077594.1	ILMN_173994	C14ORF73	NM_001077594.1	NM_001077594.1		91828	117938265	NM_001077594.1	C14orf73	NP_001071062.1	ILMN_2194388	0001780315	S	2089	ACTGGGCCGCCAGCGGAACCAGCATCTCTTGCAGCACACTCAAGACCTGC	14	+	102646157-102646206	14q32.32b	Homo sapiens chromosome 14 open reading frame 73 (C14orf73), mRNA.					
Homo sapiens	RefSeq	NM_001014999.1	ILMN_28903	GIYD2	NM_024044.2	NM_024044.2		79008	30089943	NM_024044.2	GIYD2	NP_076949.1	ILMN_1664993	0004540707	I	431	TTGAGTGGGCTTGGCAGCACCCGCACGCCTCGCGCCGCCTGGCGCACGTG	16	+	29374367-29374416	16p11.2d	Homo sapiens GIY-YIG domain containing 2 (GIYD2), transcript variant 1, mRNA.				MGC5178; MGC2532; FLJ23439	
Homo sapiens	RefSeq	XM_001716550.1	ILMN_342244	LOC100129236	XM_001716550.1	XM_001716550.1		100129236	169216744	XM_001716550.1	LOC100129236	XP_001716602.1	ILMN_3261387	0000110544	M	209	CTTTGAGGGAGTTCCAGGAAAAAAGCCACTCCCGAAAGACCGCCGCTTCA	X	+	150435055-150435104	Xq28d	PREDICTED: Homo sapiens similar to hCG1653500 (LOC100129236), mRNA.					
Homo sapiens	RefSeq	NM_172234.1	ILMN_8557	IL17RB	NM_018725.3	NM_018725.3		55540	112382255	NM_018725.3	IL17RB	NP_061195.2	ILMN_1767523	0001070152	A	1535	GCTGCTCCTTGTAGCCCACCCATGAGAAGCAAGAGACCTTAAAGGCTTCC	3	+	53874362-53874375:53874376-53874411	3p21.1b-p21.1a	Homo sapiens interleukin 17 receptor B (IL17RB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10749887] [evidence TAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10815801] [evidence NAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 10749887] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [pmid 10815801] [evidence NAS]	IL17BR; IL17RH1; EVI27; MGC5245; CRL4	IL17RH1; IL17BR; EVI27; MGC5245; CRL4
Homo sapiens	RefSeq	NM_001008496.1	ILMN_3273	PIWIL3	NM_001008496.2	NM_001008496.2		440822	153792297	NM_001008496.2	PIWIL3	NP_001008496.2	ILMN_1735693	0002060719	S	3308	GATCTCACAGCTGAACGTGACTGAACATTTTCCACCCCAAGCAGGGCCAC	22	-	25115147-25115196	22q11.23b-q11.23c	Homo sapiens piwi-like 3 (Drosophila) (PIWIL3), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	HIWI3	
Homo sapiens	RefSeq	XM_942745.1	ILMN_46408	LOC643509	XM_932666.2	XM_932666.2		643509	113417166	XM_932666.2	LOC643509	XP_937759.1	ILMN_1665821	0001510056	I	688	GTATTTTTACATTAGAAAAGGTTTTTTGTTGACTTTAGATCTATAATTAT					PREDICTED: Homo sapiens similar to Dihydrofolate reductase, transcript variant 2 (LOC643509), mRNA.					
Homo sapiens	RefSeq	NM_032794.1	ILMN_14709	SLC44A4	NM_032794.1	NM_032794.1		80736	14249467	NM_032794.1	SLC44A4	NP_116183.1	ILMN_2274775	0002510411	I	2484	AGATCGCGCCACTGCACTCCAACCTGGGTGACAGACTCTGTCTCCAAAAC	6	-	31938999-31939048	6p21.32b	Homo sapiens solute carrier family 44, member 4 (SLC44A4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ14491; NG22; CTL4; C6orf29	FLJ14491; NG22; CTL4; C6orf29
Homo sapiens	RefSeq	NM_032794.1	ILMN_14709	SLC44A4	NM_032794.1	NM_032794.1		80736	14249467	NM_032794.1	SLC44A4	NP_116183.1	ILMN_1719250	0005690647	A	2185	CCCACCGTCCAGCCATCCAACCTCACTTCGCCTTACAGGTCTCCATTTTG	6	-	31939298-31939347	6p21.32b	Homo sapiens solute carrier family 44, member 4 (SLC44A4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ14491; NG22; CTL4; C6orf29	FLJ14491; NG22; CTL4; C6orf29
Homo sapiens	RefSeq	NM_005461.3	ILMN_170425	MAFB	NM_005461.3	NM_005461.3		9935	31652256	NM_005461.3	MAFB	NP_005452.2	ILMN_1764709	0002060440	S	3018	TCCCATTTGAAATTGCTGGCGCTGCTGGCCGGATGCATTTTTGAGTTTGT	20	-	39314809-39314858	20q12b	Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) (MAFB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8001130] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IEA]; The process whose specific outcome is the progression of sensory organs over time, from its formation to the mature structure [goid 7423] [pmid 8001130] [evidence TAS]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte differentiation [goid 45647] [pmid 8620536] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10698492] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	KRML; MGC43127	KRML; MGC43127
Homo sapiens	RefSeq	XR_019652.2	ILMN_162568	LOC392435	XR_019652.2	XR_019652.2		392435	169216206	XR_019652.2	LOC392435		ILMN_3293065	0002940162	M	929	TTGCAGCAAGGGCTCACATTAGGGCTGTGGCCAATGCACGTTCCAAGGCC				Xp21.3b	PREDICTED: Homo sapiens similar to hCG1811022 (LOC392435), mRNA.					
Homo sapiens	RefSeq	XM_930669.1	ILMN_46759	LOC642268	XM_930669.1	XM_930669.1		642268	88953528	XM_930669.1	LOC642268	XP_935762.1	ILMN_1652430	0000650703	S	154	AGAGAGAGGCCATCTTGGACATCCTAGTCCTGTTGAACTCAGATGACTGC	2	-	111588206-111588255		PREDICTED: Homo sapiens hypothetical protein LOC642268 (LOC642268), mRNA.					
Homo sapiens	RefSeq	NM_017712.1	ILMN_138961	PGPEP1	NM_017712.1	NM_017712.1		54858	8923197	NM_017712.1	PGPEP1	NP_060182.1	ILMN_1707513	0002510746	S	1826	CCTGGTAGCTCTGTGTCCTGAGAAATCCAGAGTGTGGGAGACATCACTGC	19	+	18337823-18337872	19p13.11c	Homo sapiens pyroglutamyl-peptidase I (PGPEP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	PGPI; PGP; Pcp; FLJ20208; PGP-I	PGPI; PGP; Pcp; FLJ20208; PGP-I
Homo sapiens	Unigene	Hs.582102	ILMN_134283	HS.582102	Hs.582102		Hs.582102		83150463	DB338306			ILMN_1862572	0000520739	S	102	GTAGCAGCAGGCAGAGTTCTGGGGAGTAAACTTGCCCTTATCACACAAGG	Y	-	142359449-142359469:142359471-142359499		DB338306 TESTI2 Homo sapiens cDNA clone TESTI2036179 3, mRNA sequence					
Homo sapiens	Unigene	Hs.568741	ILMN_120922	HS.568741	Hs.568741		Hs.568741		66257073	DN997246			ILMN_1846922	0002450435	S	462	CCGGGCAGAGCAAGGAGAGAATGAGGAGTGACATGGGTGTTGCCGTGAGT	10	-	133993867-133993916		TC125227 Human breast cancer tissue, large insert, pCMV expression library Homo sapiens cDNA clone TC125227 5 similar to Homo sapiens LOC399828 (LOC387724), mRNA sequence					
Homo sapiens	RefSeq	NM_012143.2	ILMN_3675	TFIP11	NM_012143.2	NM_012143.2		24144	56788354	NM_012143.2	TFIP11	NP_036275.1	ILMN_2408102	0002570441	A	2609	GTCTTCATGCCCGTCATTGGGAAGCGACACGAAGGGAAGCAGCTCTACAC	22	-	26888084-26888133	22q12.1a	Homo sapiens tuftelin interacting protein 11 (TFIP11), transcript variant 2, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 11991638] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 11256614] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ22086; TIP39; bK445C9.6	FLJ22086; TIP39; bK445C9.6
Homo sapiens	RefSeq	NM_012143.2	ILMN_3675	TFIP11	NM_012143.2	NM_012143.2		24144	56788354	NM_012143.2	TFIP11	NP_036275.1	ILMN_1672571	0002100332	A	2531	GGCATTGGCGTGGCCGCTAGCTCTGTGCCCATGAACTTTAAGGACCTCAT	22	-	26888162-26888211	22q12.1a	Homo sapiens tuftelin interacting protein 11 (TFIP11), transcript variant 2, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 11991638] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 11256614] [evidence IDA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ22086; TIP39; bK445C9.6	FLJ22086; TIP39; bK445C9.6
Homo sapiens	RefSeq	NM_000849.3	ILMN_170345	GSTM3	NM_000849.3	NM_000849.3		2947	39995110	NM_000849.3	GSTM3	NP_000840.2	ILMN_1736184	0007150598	S	3844	GACACAGAACACAGACGCCTTACTGGCAACCTGCTTTCAAGACCCCTGTC	1	-	110078131-110078180	1p13.3b	Homo sapiens glutathione S-transferase M3 (brain) (GSTM3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The establishment of the barrier between the perineurium of peripheral nerves and the vascular endothelium of endoneurial capillaries. The perineurium acts as a diffusion barrier, but ion permeability at the blood-nerve barrier is still higher than at the blood-brain barrier [goid 8065] [pmid 2345169] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics [goid 43627] [pmid 10037815] [evidence IEP]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 2345169] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GST5; MGC3310; GTM3; MGC3704; GSTM3-3; GSTB	GST5; MGC3310; GTM3; MGC3704; GSTM3-3; GSTB
Homo sapiens	RefSeq	NM_014372.3	ILMN_164003	RNF11	NM_014372.3	NM_014372.3		26994	34452682	NM_014372.3	RNF11	NP_055187.1	ILMN_1810785	0000520482	S	1301	CCCTTCCCCACCCGAATTCTTTTCTGAAGTTGCTGGCATTTGGGTCAAGG	1	+	51509960-51510009	1p32.3e	Homo sapiens ring finger protein 11 (RNF11), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 14755250] [evidence IDA]	The process by which a ubiquitin moiety, or multiple moieties, are covalently attached to the target protein, thereby initiating the degradation of that protein [goid 42787] [pmid 14755250] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10673045] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14755250] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10673045] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SID1669; CGI-123; MGC51169	SID1669; CGI-123; MGC51169
Homo sapiens	RefSeq	NM_014372.3	ILMN_164003	RNF11	NM_014372.3	NM_014372.3		26994	34452682	NM_014372.3	RNF11	NP_055187.1	ILMN_2168758	0004590520	S	2901	CACAGAAGTTTGGTGGTAATATTGAAAGAACTAGCATTGGGCAGAATGTG	1	+	51511560-51511609	1p32.3e	Homo sapiens ring finger protein 11 (RNF11), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 14755250] [evidence IDA]	The process by which a ubiquitin moiety, or multiple moieties, are covalently attached to the target protein, thereby initiating the degradation of that protein [goid 42787] [pmid 14755250] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10673045] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14755250] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10673045] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SID1669; CGI-123; MGC51169	SID1669; CGI-123; MGC51169
Homo sapiens	RefSeq	NM_004258.1	ILMN_24629	IGSF2	NM_004258.2	NM_004258.2		9398	142385720	NM_004258.2	IGSF2	NP_004249.1	ILMN_1799278	0001400369	S	3053	GGAGGGAAGACGAGGAGGAAGATGAAGGCAACTGAATCCCAAGAGGCACC				1p13.1a	Homo sapiens immunoglobulin superfamily, member 2 (IGSF2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7722300] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7722300] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7722300] [evidence TAS]	Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide [goid 16812] [evidence IEA]	V7; CD101	V7; CD101
Homo sapiens	RefSeq	NM_014352.1	ILMN_9330	POU2F3	NM_014352.1	NM_014352.1		25833	7657408	NM_014352.1	POU2F3	NP_055167.1	ILMN_2129397	0002070661	S	2486	CTCTCAAGTAGCGGATTACAGGCGCCCACCACCAAAAATTAGCCCAGCTA	11	+	119695479-119695528	11q23.3g	Homo sapiens POU domain, class 2, transcription factor 3 (POU2F3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9242494] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10473598] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 10473598] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12624109] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 9242494] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC126698; Skn-1a; FLJ40063; PLA-1; OCT11; Epoc-1	MGC126698; Skn-1a; FLJ40063; PLA-1; OCT11; Epoc-1
Homo sapiens	RefSeq	NM_000770.2	ILMN_11984	CYP2C8	NM_000770.3	NM_000770.3		1558	98991772	NM_000770.3	CYP2C8	NP_000761.3	ILMN_1769155	0002100711	A	1518	GGGATTGTTTCTCTGCCACCCTCATACCAGATCTGCTTCATCCCTGTCTG	10	-	96814630-96814679	10q23.33c	Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 8 (CYP2C8), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence NAS]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence NAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	P450 MP-12/MP-20; CPC8	P450 MP-12/MP-20; CPC8
Homo sapiens	RefSeq	NM_006663.2	ILMN_2375	PPP1R13L	NM_006663.2	NM_006663.2		10848	63003906	NM_006663.2	PPP1R13L	NP_006654.2	ILMN_1669390	0001240176	S	2814	CAGATCCCGTCCAAAGTGCCTCCCATGCCTACCACCATCATCACATCCCC	19	-	50574965-50575014	19q13.32a	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 13 like (PPP1R13L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10336463] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10336463] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10336463] [evidence TAS]	IASPP; RAI; iASPP gene; NKIP1	IASPP; RAI; iASPP gene; NKIP1
Homo sapiens	RefSeq	XM_001716541.1	ILMN_342871	NT5DC4	XM_001716541.1	XM_001716541.1		284958	169163020	XM_001716541.1	NT5DC4	XP_001716593.1	ILMN_3301622	0002630300	M	2272	GGCTGAAAGGGCCAGGTCATGGAAACCAAGAAGTGAGAAGCATTTCAGGG	2	+	113216613-113216662	2q13d	PREDICTED: Homo sapiens 5'-nucleotidase domain containing 4 (NT5DC4), mRNA.			Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	XR_040743.1	ILMN_337297	LOC728147	XR_040743.1	XR_040743.1		728147	169205152	XR_040743.1	LOC728147		ILMN_3201900	0004490086	A	2152	GGGGACCACAGGCAGAAACTAGGAGAAACCACAGGAGGAAACTAGGGGTC				12p13.33a	PREDICTED: Homo sapiens hypothetical protein LOC728147 (LOC728147), miscRNA.					
Homo sapiens	RefSeq	NM_080593.1	ILMN_17974	HIST1H2BK	NM_080593.1	NM_080593.1		85236	18105047	NM_080593.1	HIST1H2BK	NP_542160.1	ILMN_1796179	0006110630	S	747	CCCACTGGGGGGTTGGGGTAATATTCTGTGGTCCTCAGCCCTGTACCTTA	6	-	27214075-27214124	6p22.1c	Homo sapiens histone cluster 1, H2bk (HIST1H2BK), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC131989; H2BFT; H2BFAiii; H2B/S	H2B/S; MGC131989; H2BFT; H2BFAiii
Homo sapiens	RefSeq	NM_017445.1	ILMN_17974	HIST1H2BK	NM_080593.1	NM_080593.1		85236	18105047	NM_080593.1	HIST1H2BK	NP_542160.1	ILMN_1813314	0005050402	S	53	CAGCGAAGTCCGCTCCCGCGCCCAAGAAGGGCTCGAAGAAAGCCGTGACT	6	-	27222496-27222545	6p22.1c	Homo sapiens histone cluster 1, H2bk (HIST1H2BK), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC131989; H2BFT; H2BFAiii; H2B/S	
Homo sapiens	RefSeq	XM_942223.1	ILMN_3321	QKI	NM_006775.1	NM_006775.1		9444	45827705	NM_006775.1	QKI	NP_006766.1	ILMN_1690476	0005220445	A	1466	TGAACCTAGTGGTGTATTAGGTGCGGTGGCTACTAAAGTTCGAAGGCACG	6	+	163836187-163836225:163836226-163836236	6q26c	Homo sapiens quaking homolog, KH domain RNA binding (mouse) (QKI), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	DKFZp586I0923; Hqk; QK3; QK	
Homo sapiens	RefSeq	NM_206854.1	ILMN_3321	QKI	NM_006775.1	NM_006775.1		9444	45827705	NM_006775.1	QKI	NP_006766.1	ILMN_1773485	0004570440	A	1503	GTTCGAAGGCACGATATGCGTGTCCATCCTTACCAAAGGATTGTGACCGC	6	+	163836224-163836225:163836226-163836273	6q26c	Homo sapiens quaking homolog, KH domain RNA binding (mouse) (QKI), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	DKFZp586I0923; Hqk; QK3; QK	DKFZp586I0923; Hqk; QK3; QK
Homo sapiens	RefSeq	NM_005623.2	ILMN_15634	CCL8	NM_005623.2	NM_005623.2		6355	22538815	NM_005623.2	CCL8	NP_005614.2	ILMN_1772964	0006620121	S	1039	GTCATTGTTCTCCCTCCTACCTGTCTGTAGTGTTGTGGGGTCCTCCCATG	17	+	29672323-29672372	17q12a	Homo sapiens chemokine (C-C motif) ligand 8 (CCL8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 10734056] [evidence TAS]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 10734056] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 9468473] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9119400] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10734056] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9468473] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9119400] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10734056] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 9468473] [evidence TAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	HC14; MCP2; SCYA10; SCYA8; MCP-2	HC14; MCP2; SCYA10; SCYA8; MCP-2
Homo sapiens	RefSeq	NM_018437.3	ILMN_9415	HEMGN	NM_018437.3	NM_018437.3		55363	37574621	NM_018437.3	HEMGN	NP_060907.2	ILMN_1689675	0006290377	I	23	CAACCAGAAGTTATGAAGATAGGTACTGTGGGTGTTAGAAAGATTCACGG	9	-	100707062-100707111	9q22.33b	Homo sapiens hemogen (HEMGN), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		EDAG; EDAG-1	EDAG-1; EDAG
Homo sapiens	RefSeq	NM_018437.3	ILMN_9415	HEMGN	NM_018437.3	NM_018437.3		55363	37574621	NM_018437.3	HEMGN	NP_060907.2	ILMN_1680094	0006100424	A	891	GCTGATCTGGCAGGATGCTCTCTTCAAGCATATCCAAAACCAGATGTGCC	9	-	100692876-100692925	9q22.33b	Homo sapiens hemogen (HEMGN), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		EDAG; EDAG-1	EDAG-1; EDAG
Homo sapiens	RefSeq	NM_030884.2	ILMN_20470	MAP4	NM_030884.2	NM_030884.2		4134	47519674	NM_030884.2	MAP4	NP_112146.2	ILMN_1788351	0006550608	I	1156	AGCAGAATGGCAGAACCAATGAAAGGCTACATGAGACCCACCAAGTCCCG	3	-	47925602-47925651	3p21.31f	Homo sapiens microtubule-associated protein 4 (MAP4), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 1905296] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 1905296] [evidence TAS]	DKFZp779A1753; MGC8617	DKFZp779A1753; MGC8617
Homo sapiens	RefSeq	NM_001079537.1	ILMN_164643	TRAPPC6B	NM_001079537.1	NM_001079537.1		122553	118600990	NM_001079537.1	TRAPPC6B	NP_001073005.1	ILMN_2369104	0002680288	A	3250	TTAGTATGGGACAATTGAATATGCCTTTTTCTGCGGGAGTAGGTGGGGAG	14	-	39617066-39617115	14q21.1b	Homo sapiens trafficking protein particle complex 6B (TRAPPC6B), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]			
Homo sapiens	RefSeq	NM_001079537.1	ILMN_164643	TRAPPC6B	NM_001079537.1	NM_001079537.1		122553	118600990	NM_001079537.1	TRAPPC6B	NP_001073005.1	ILMN_2272967	0002190022	I	608	CTATGTACTTCAGGACAACAAATTTCGCCTGCTTACTCAGATGTCTGCAG	14	-	39623443-39623492	14q21.1b	Homo sapiens trafficking protein particle complex 6B (TRAPPC6B), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]			
Homo sapiens	RefSeq	NM_014331.2	ILMN_23296	SLC7A11	NM_014331.3	NM_014331.3		23657	80861465	NM_014331.3	SLC7A11	NP_055146.1	ILMN_1655229	0002750128	S	1629	CAGGGATTGGCTTCGTCATCACTCTGACTGGAGTCCCTGCGTATTATCTC	4	-	139319866-139319915	4q28.3i	Homo sapiens solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 (SLC7A11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10206947] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]	Catalysis of the transfer of amino acids from one side of a membrane to the other. Amino acids are organic molecules that contain an amino group and a carboxyl group [goid 15171] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cystine(out) + glutamate(in) = cystine(in) + glutamate(out) [goid 15327] [pmid 10206947] [evidence TAS]	CCBR1; xCT	CCBR1; xCT
Homo sapiens	RefSeq	XM_001715806.1	ILMN_345091	LOC100130426	XM_001715806.1	XM_001715806.1		100130426	169176420	XM_001715806.1	LOC100130426	XP_001715858.1	ILMN_3188165	0006370605	A	527	GAAATACTGGGAGTGCTGGACCCTTGACCCCTATGCCTCCACCGAACCAC	9	-	78981525-78981574	9q21.13c	PREDICTED: Homo sapiens hypothetical protein LOC100130426 (LOC100130426), mRNA.					
Homo sapiens	RefSeq	NM_001077620.1	ILMN_167300	PRCD	NM_001077620.1	NM_001077620.1		768206	117606325	NM_001077620.1	PRCD	NP_001071088.1	ILMN_3239534	0004760382	S	514	GCGTGTGTTCCAAACGGGCAGTAGCGTGTGGGAAGGAAAAAGCCTGACAC	17	+	72051624-72051673	17q25.1d	Homo sapiens progressive rod-cone degeneration (PRCD), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]		RP36	RP36
Homo sapiens	RefSeq	NM_032012.1	ILMN_16947	C9ORF5	NM_032012.3	NM_032012.3		23731	153251949	NM_032012.3	C9orf5	NP_114401.2	ILMN_1788384	0002940687	S	7623	CAGAGACCCAGCAGATGTAACTCTCATTGTAGCCATCCCAAAGAAAACCC	9	-	111777739-111777788	9q31.3a	Homo sapiens chromosome 9 open reading frame 5 (C9orf5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10564813] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CG2; FLJ33224; CG-2; FLJ23668	CG2; CG-2
Homo sapiens	RefSeq	XM_936532.1	ILMN_41995	LOC647468	XM_936532.1	XM_936532.1		647468	89042635	XM_936532.1	LOC647468	XP_941625.1	ILMN_1764310	0003420095	S	473	CAGAAGAGGGTCCTGGCTTGCTGATGGAGCTCAGGCCTATGGAAAACAGG					PREDICTED: Homo sapiens similar to 14-3-3 protein epsilon (14-3-3E) (Mitochondrial import stimulation factor L subunit) (MSF L) (LOC647468), mRNA.					
Homo sapiens	RefSeq	NM_018295.1	ILMN_18348	TMEM140	NM_018295.2	NM_018295.2		55281	111607481	NM_018295.2	TMEM140	NP_060765.2	ILMN_1736863	0004670414	S	1397	ACCTGAAGCCAGACAGGGCAGAGGCGTCCGCTGACAAATCACTCCCATGA	7	+	134500907-134500956	7q33b	Homo sapiens transmembrane protein 140 (TMEM140), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ11000	
Homo sapiens	RefSeq	XM_933120.1	ILMN_35933	LOC644019	XM_933120.1	XM_933120.1		644019	89029492	XM_933120.1	LOC644019	XP_938213.1	ILMN_1736711	0003890142	I	812	GTTGCAAGATTTTGTGTGACTGTTTATTCCTCTGGTGAATTGATATTCCA	9	-	68548966-68549015	9q12i	PREDICTED: Homo sapiens similar to COBW domain containing 3, transcript variant 8 (LOC644019), mRNA.					
Homo sapiens	RefSeq	NM_001006939.2	ILMN_180838	LRRC18	NM_001006939.2	NM_001006939.2		474354	55926124	NM_001006939.2	LRRC18	NP_001006940.2	ILMN_1756683	0002900221	S	1528	ATGAGTGGAAGCACCTATACCCCAAAGCCCTCACCAGAAGGAGGTGCCGG	10	-	49787576-49787625	10q11.22d	Homo sapiens leucine rich repeat containing 18 (LRRC18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	UNQ933; MGC34773; VKGE9338; UNQ9338	UNQ933; MGC34773; VKGE9338; UNQ9338
Homo sapiens	RefSeq	NM_181612.1	ILMN_26848	KRTAP19-6	NM_181612.2	NM_181612.2		337973	78126145	NM_181612.2	KRTAP19-6	NP_853643.1	ILMN_1784216	0000670309	S	83	TGGTGGTCTGGGCTATGGCTGTGGCTGTGGAGGCTACAGATATGGCTCTG	21	-	31914049-31914098	21q22.11a	Homo sapiens keratin associated protein 19-6 (KRTAP19-6), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP19.6	KAP19.6
Homo sapiens	RefSeq	NM_022802.1	ILMN_20837	CTBP2	NM_022802.1	NM_022802.1		1488	12746589	NM_022802.1	CTBP2	NP_073713.1	ILMN_1781031	0004880292	I	1540	CTCAAACCCCCTTCACCCAGGCCCCAGAACAGCTTACTCCACGGCATACA	10	-	126704865-126704914	10q26.13e	Homo sapiens C-terminal binding protein 2 (CTBP2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9479502] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 9479502] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]		
Homo sapiens	RefSeq	XM_936415.1	ILMN_34384	LOC647343	XM_936415.1	XM_936415.1		647343	89026500	XM_936415.1	LOC647343	XP_941508.1	ILMN_1669138	0005550041	S	591	GCTGTGGGATGAGAAGGTGAACTCGGAGATGCAGCGTGAGGCCTCCAAGT					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region C5 precursor (LOC647343), mRNA.					
Homo sapiens	RefSeq	NM_025251.1	ILMN_28510	KIAA1688	NM_025251.1	NM_025251.1		80728	58331178	NM_025251.1	KIAA1688	NP_079527.1	ILMN_1784436	0004850300	S	5090	CCCGACGCATGGACCCGAGAGGCGACGACACGAGTGAATAAAGTGCACAT	8	-	145755639-145755688	8q24.3h	Homo sapiens KIAA1688 protein (KIAA1688), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_005775.3	ILMN_23885	SORBS3	NM_005775.3	NM_005775.3		10174	63999695	NM_005775.3	SORBS3	NP_005766.2	ILMN_1789338	0003870301	A	2994	CCAGGCACCACTAGCCTGGCTCAAATATTCCCCAGGGAGACTGCTGTGTG	8	+	22488824-22488873	8p21.3a	Homo sapiens sorbin and SH3 domain containing 3 (SORBS3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 9885244] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 51495] [pmid 9885244] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51496] [pmid 9885244] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9885244] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane [goid 17166] [pmid 9885244] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	SH3D4; vinexin; SCAM-1; SCAM1	SH3D4; vinexin; SCAM-1; SCAM1
Homo sapiens	RefSeq	NM_005775.3	ILMN_23885	SORBS3	NM_005775.3	NM_005775.3		10174	63999695	NM_005775.3	SORBS3	NP_005766.2	ILMN_1717904	0000380386	I	1127	CCTGGTGAGAAGCCCTCCCAGCCCATTGAGGTGCTGCTGGAGAGAGAGCT	8	+	22477950-22477979:22478726-22478745	8p21.3a	Homo sapiens sorbin and SH3 domain containing 3 (SORBS3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 9885244] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 51495] [pmid 9885244] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51496] [pmid 9885244] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The attachment of a cell to the underlying substrate via adhesion molecules [goid 31589] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9885244] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane [goid 17166] [pmid 9885244] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	SH3D4; vinexin; SCAM-1; SCAM1	SH3D4; vinexin; SCAM-1; SCAM1
Homo sapiens	RefSeq	XM_001713658.1	ILMN_348451	LOC100130553	XM_001713658.1	XM_001713658.1		100130553	169168596	XM_001713658.1	LOC100130553	XP_001713710.1	ILMN_3246360	0006060523	S	17	CTACACGCCGCCGCTTGTGCTGCAGCCATGTCTCTAGTGATCCCTGAAAA					PREDICTED: Homo sapiens hypothetical protein LOC100130553 (LOC100130553), mRNA.					
Homo sapiens	RefSeq	NM_033337.1	ILMN_26603	CAV3	NM_033337.1	NM_033337.1		859	15451859	NM_033337.1	CAV3	NP_203123.1	ILMN_1810532	0006380092	I	568	CAGACTGGTCCCCGGGGGACTTCTTCACAGGGGCTGCTGGCGAGCTCTTT	3	+	8762598-8762647	3p25.3d	Homo sapiens caveolin 3 (CAV3), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 10988290] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IEA]	The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; Any process that modulates the frequency, rate or extent of skeletal muscle contraction [goid 14819] [pmid 17524427] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of membrane rafts, small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes [goid 31579] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of the T-tubule. A T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril [goid 33292] [pmid 12847114] [evidence TAS]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [pmid 12847114] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IEA]; Any process that reduces cell size [goid 45792] [pmid 12847114] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; Any process that stops or reduces the activity of the enzyme nitric-oxide synthase [goid 51001] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51925] [evidence IEA]; Any process that modulates the frequency, rate or extent of cardiac muscle contraction [goid 55117] [pmid 17275750] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10988290] [evidence IDA];  [goid 17080] [pmid 17275750] [evidence IMP]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 10988290] [evidence IDA]	MGC126100; MGC126101; LGMD1C; VIP-21; VIP21; MGC126129	MGC126100; MGC126101; LGMD1C; VIP-21; VIP21; MGC126129
Homo sapiens	RefSeq	NM_001234.3	ILMN_26603	CAV3	NM_033337.1	NM_033337.1		859	15451859	NM_033337.1	CAV3	NP_203123.1	ILMN_1804980	0003130020	A	1169	AATGGGCACCAATGGAGGAAAATGACCCTTGGGCTGGCAGGGGCAGTGAC	3	+	8763199-8763248	3p25.3d	Homo sapiens caveolin 3 (CAV3), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 10988290] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane [goid 30315] [evidence IEA]	The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; Any process that modulates the frequency, rate or extent of skeletal muscle contraction [goid 14819] [pmid 17524427] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of membrane rafts, small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes [goid 31579] [evidence IEA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of the T-tubule. A T-tubule is an invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril [goid 33292] [pmid 12847114] [evidence TAS]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [pmid 12847114] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence IEA]; Any process that reduces cell size [goid 45792] [pmid 12847114] [evidence IMP]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; Any process that stops or reduces the activity of the enzyme nitric-oxide synthase [goid 51001] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51925] [evidence IEA]; Any process that modulates the frequency, rate or extent of cardiac muscle contraction [goid 55117] [pmid 17275750] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10988290] [evidence IDA];  [goid 17080] [pmid 17275750] [evidence IMP]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 10988290] [evidence IDA]	MGC126100; MGC126101; LGMD1C; VIP-21; VIP21; MGC126129	MGC126100; MGC126101; LGMD1C; VIP-21; VIP21; MGC126129; LQT9
Homo sapiens	RefSeq	NM_032974.2	ILMN_8378	CASP10	NM_032977.3	NM_032977.3		843	98985798	NM_032977.3	CASP10	NP_116759.2	ILMN_1797578	0002630445	A	1444	TCCAGCCCATGCCGACGGGGACTGCTTCGTGTTCTGTATTCTGACCCATG	2	+	201782141-201782190	2q33.1f	Homo sapiens caspase 10, apoptosis-related cysteine peptidase (CASP10), transcript variant D, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 11048727] [evidence EXP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 10412980] [evidence TAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 8755496] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11717445] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ALPS2; MCH4; FLICE2	ALPS2; MCH4; FLICE2
Homo sapiens	RefSeq	NM_000455.4	ILMN_15023	STK11	NM_000455.4	NM_000455.4		6794	58530881	NM_000455.4	STK11	NP_000446.1	ILMN_1751871	0004150414	S	2924	AAGGTGGATTTGAGCTGTGGCTGTGAGGGGTGTTTGGGAGCTGCTGGGTG	19	+	1179082-1179131	19p13.3i	Homo sapiens serine/threonine kinase 11 (STK11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12805220] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17216128] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12805220] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12805220] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 17216128] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 12805220] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 17216128] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 12805220] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 12805220] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17216128] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12805220] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PJS; LKB1	PJS; LKB1
Homo sapiens	RefSeq	XM_927773.1	ILMN_40376	LOC644668	XM_927773.1	XM_927773.1		644668	89027721	XM_927773.1	LOC644668	XP_932866.1	ILMN_1673705	0002360044	S	121	AGCGAAGAAGGACGTGGCTCTTTTAACCTGAGCGGCCACGTCCAGCAAAG	8	+	1805415-1805464		PREDICTED: Homo sapiens hypothetical protein LOC644668 (LOC644668), mRNA.					
Homo sapiens	RefSeq	XM_930715.1	ILMN_137199	NBPF10	XM_930715.1	XM_930715.1		440673	88943212	XM_930715.1	NBPF10	XP_935808.1	ILMN_1652991	0004730528	I	289	CTCTGTCCCCAGAGCAGTCACCCTCCACCCTGCATTTAGAAGGATAGTTT	1	-	146697048-146697097		PREDICTED: Homo sapiens neuroblastoma breakpoint family, member 10, transcript variant 5 (NBPF10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	Unigene	Hs.233165	ILMN_82828	HS.233165	Hs.233165		Hs.233165		5875949	AW022419			ILMN_1904661	0004860112	S	25	GTATTTCCCCTCTGTCTGGTGATTTGAAGAAGACTGTGACTCAGCTGCCT	14	+	40666302-40666351		df38c11.y1 Morton Fetal Cochlea Homo sapiens cDNA clone IMAGE:2485629 5, mRNA sequence					
Homo sapiens	RefSeq	XM_933544.1	ILMN_26391	WBSCR16	NM_030798.3	NM_030798.3		81554	94538368	NM_030798.3	WBSCR16	NP_110425.1	ILMN_1679978	0004900356	I	1977	GCTTCGGCCCTCGGTTTTCATTCAGGCCACCCTGCTCATGGCCCTTCCTG	7	-	74456634-74456683	7q11.23c	Homo sapiens Williams-Beuren syndrome chromosome region 16 (WBSCR16), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		DKFZp434D0421; MGC44931	
Homo sapiens	RefSeq	NM_030798.2	ILMN_26391	WBSCR16	NM_030798.3	NM_030798.3		81554	94538368	NM_030798.3	WBSCR16	NP_110425.1	ILMN_1765525	0001050753	A	567	CCGGAAAGATAAAACGAGGGGCTACGAGTATGTGTTGGAGCCCTCACCCG	7	-	74482569-74482605:74486454-74486466	7q11.23c	Homo sapiens Williams-Beuren syndrome chromosome region 16 (WBSCR16), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		DKFZp434D0421; MGC44931	DKFZp434D0421; MGC44931
Homo sapiens	RefSeq	NM_005431.1	ILMN_23276	XRCC2	NM_005431.1	NM_005431.1		7516	4885656	NM_005431.1	XRCC2	NP_005422.1	ILMN_1651569	0007320243	S	2575	CAGCCATTGTGGAAGACAGTGTGGGGATAAAGACAGAGATACCATTCAAC	7	-	152344031-152344080	7q36.1e	Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 2 (XRCC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9628903] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 9628903] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]	DKFZp781P0919	DKFZp781P0919
Homo sapiens	RefSeq	NM_005431.1	ILMN_23276	XRCC2	NM_005431.1	NM_005431.1		7516	4885656	NM_005431.1	XRCC2	NP_005422.1	ILMN_2204909	0004200605	S	2772	CAGCCATAAAAAGGAACAAGACTGACTGGGCGTGGTGGCTCATGCCTGTG	7	-	152343834-152343883	7q36.1e	Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 2 (XRCC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9628903] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 9628903] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [evidence IEA]	DKFZp781P0919	DKFZp781P0919
Homo sapiens	RefSeq	NM_003129.3	ILMN_521	SQLE	NM_003129.3	NM_003129.3		6713	62865634	NM_003129.3	SQLE	NP_003120.2	ILMN_1772241	0007050068	S	2054	CTTAGAAGCCACTGACAATTCTCATCTGAGGTCCATGCCAGCAAGCTTCC	8	+	126023798-126023847	8q24.13d	Homo sapiens squalene epoxidase (SQLE), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10666321] [evidence EXP]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [pmid 9286711] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the formation of a 2,3-epoxide in squalene [goid 4506] [pmid 9286711] [evidence NAS]; Catalysis of the formation of a 2,3-epoxide in squalene [goid 4506] [pmid 10666321] [evidence EXP]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	Unigene	Hs.538498	ILMN_103939	HS.538498	Hs.538498		Hs.538498		7794334	AW779731			ILMN_1849503	0006130102	S	214	CACATTTGCAGAAAGTCTCTTCTGTGCTGCTCATGGAGCCAGAGTGGTTC	10	-	52066739-52066788		hn85c04.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:3034662 3, mRNA sequence					
Homo sapiens	RefSeq	NM_152369.2	ILMN_9976	SLC44A3	NM_152369.2	NM_152369.2		126969	32698778	NM_152369.2	SLC44A3	NP_689582.1	ILMN_1658498	0004230500	S	1393	CCGATGCTGCTACTGCTGTTTCTGGTGTCTTGACAAATACCTGCTCCATC	1	+	95105504-95105553	1p21.3d	Homo sapiens solute carrier family 44, member 3 (SLC44A3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			CTL3; MGC45474	CTL3; MGC45474
Homo sapiens	RefSeq	NM_004140.3	ILMN_18915	LLGL1	NM_004140.3	NM_004140.3		3996	62912475	NM_004140.3	LLGL1	NP_004131.3	ILMN_1798212	0002470608	S	3995	GTGTGTGCGGGCATGGATGTGACTGGGAGCTCTGCTGGGCACCCACATCT	17	+	18088684-18088733	17p11.2f	Homo sapiens lethal giant larvae homolog 1 (Drosophila) (LLGL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7542763] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 7542763] [evidence TAS]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [pmid 7542763] [evidence IDA]	Retaining the established polarization of a cell along its apical/basal axis [goid 35090] [evidence IEA]; Retaining the established polarization of a cell along its apical/basal axis [goid 35090] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 7542763] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [pmid 7542763] [evidence IDA]; Retaining the established polarization of a cell along its apical/basal axis [goid 35090] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 7542763] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7542763] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 7542763] [evidence IDA]	HUGL; LLGL; DLG4; HUGL1; HUGL-1	HUGL; LLGL; DLG4; HUGL1; HUGL-1
Homo sapiens	RefSeq	NM_001005463.1	ILMN_986	EBF3	NM_001005463.1	NM_001005463.1		253738	53828925	NM_001005463.1	EBF3	NP_001005463.1	ILMN_1707232	0007160435	S	4124	CACTGAGAACGCCTGCCAGCTTCCCCATGCCCTCACTTGGTTTGTGTTTT	10	-	131634347-131634396	10q26.3b	Homo sapiens early B-cell factor 3 (EBF3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	O/E-2; COE3	O/E-2; COE3
Homo sapiens	Unigene	Hs.148844	ILMN_78754	HS.148844	Hs.148844		Hs.148844		27843846	BX098874			ILMN_1854132	0000240138	S	228	CCAGAGGACAGGAGTGTGGATTCCCGTTGACCAAGGCTGTCAGGTAGAGG	9	+	130972761-130972810		BX098874 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGp998D154543, mRNA sequence					
Homo sapiens	RefSeq	NM_002627.3	ILMN_16104	PFKP	NM_002627.3	NM_002627.3		5214	41352062	NM_002627.3	PFKP	NP_002618.1	ILMN_1805737	0002360452	S	2338	TATGACGTGTCGGACTCAGGCCAGCTGGAACATGTGCAGCCCTGGAGTGT	10	+	3149455-3149501:3150893-3150895	10p15.2b	Homo sapiens phosphofructokinase, platelet (PFKP), mRNA.	A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 6444721] [evidence EXP]; A protein complex that possesses 6-phosphofructokinase activity; homodimeric and allosteric homotetrameric forms are known [goid 5945] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate [goid 3872] [pmid 1834056] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PFKF; PFK-C; FLJ40226	PFKF; PFK-C; FLJ40226
Homo sapiens	RefSeq	NM_003026.1	ILMN_23656	SH3GL2	NM_003026.1	NM_003026.1		6456	4506930	NM_003026.1	SH3GL2	NP_003017.1	ILMN_1661491	0002600465	S	2360	GCTGCTTCCGATGTGCCACCTGCAGTAGTGGATCATGTGGAGTGAAAGGC	9	+	17786995-17787044	9p22.2a	Homo sapiens SH3-domain GRB2-like 2 (SH3GL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12218189] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11894095] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10567358] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15962011] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11157096] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9169142] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9169142] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16115810] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CNSA2; SH3P4; SH3D2A; EEN-B1; FLJ25015; FLJ20276	CNSA2; SH3P4; SH3D2A; EEN-B1; FLJ25015; FLJ20276
Homo sapiens	RefSeq	NM_005699.2	ILMN_26939	IL18BP	NM_005699.2	NM_005699.2		10068	27502394	NM_005699.2	IL18BP	NP_005690.1	ILMN_1654402	0000540736	I	1458	AACAGGAGGAGCTCTGCTTCCATATGTGGGGAGGAAAGGGTGGGCTCTGC	11	+	71390275-71390324	11q13.4a	Homo sapiens interleukin 18 binding protein (IL18BP), transcript variant C, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10023777] [evidence TAS]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [pmid 10023777] [evidence IDA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with interleukin-18 [goid 42007] [pmid 10023777] [evidence IDA]; Interacts with receptors to reduce the action of another ligand, the agonist [goid 48019] [pmid 11890646] [evidence TAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	IL18BPa	IL18BPa
Homo sapiens	RefSeq	NM_004407.2	ILMN_176520	DMP1	NM_004407.2	NM_004407.2		1758	121256627	NM_004407.2	DMP1	NP_004398.1	ILMN_2300022	0006270162	A	2113	CAGAGAGCTATGAACACGATATCTATCTGGGAACACTGAGAAGGGTGACC	4	+	88803968-88804017	4q22.1a	Homo sapiens dentin matrix acidic phosphoprotein (DMP1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 8509401] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 8509401] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [pmid 8509401] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8509401] [evidence TAS]		
Homo sapiens	RefSeq	NM_001039165.1	ILMN_14895	MRGPRE	NM_001039165.1	NM_001039165.1		116534	85986586	NM_001039165.1	MRGPRE	NP_001034254.1	ILMN_2195015	0006110224	S	579	TGCTGCTGGCTCTGCTGTGTTGCACCATGTGTGGGGCCAGCCTTATGCTG	11	-	3206008-3206057	11p15.4d	Homo sapiens MAS-related GPR, member E (MRGPRE), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]		MRGE; MGC138408; GPR167	MRGE; MGC138408; GPR167
Homo sapiens	RefSeq	XR_036902.1	ILMN_351536	LOC100134101	XR_036902.1	XR_036902.1		100134101	169161044	XR_036902.1	LOC100134101		ILMN_3248453	0004230274	S	230	CTCACTGGGTGAAGGCCGCACAAAGAACCGGAAGAGCCATCCGGGTAGCT					PREDICTED: Homo sapiens misc_RNA (LOC100134101), partial miscRNA.					
Homo sapiens	RefSeq	XM_001713999.1	ILMN_347366	LOC100130005	XM_001713999.1	XM_001713999.1		100130005	169212980	XM_001713999.1	LOC100130005	XP_001714051.1	ILMN_3267286	0003440719	M	3	GGCCAACAAAAAGCCCAAGGAAGAAGTCAAAACTGAGAACAACGATCATA				18q21.1b	PREDICTED: Homo sapiens similar to small ubiquitin-related modifier 2 (LOC100130005), mRNA.					
Homo sapiens	RefSeq	NM_002931.3	ILMN_24295	RING1	NM_002931.3	NM_002931.3		6015	51479191	NM_002931.3	RING1	NP_002922.2	ILMN_1666399	0001450707	S	1597	GGCAAAACACGCCCCCATCTGCTGCCTTTTCTATTGCCCTGCAACGTCCC	6	+	33180358-33180407	6p21.32a	Homo sapiens ring finger protein 1 (RING1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9199346] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence NAS]; The modification of histones by addition of ubiquitin groups [goid 16574] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 9199346] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF1	RNF1
Homo sapiens	RefSeq	XM_928096.1	ILMN_41635	LOC645040	XM_928096.1	XM_928096.1		645040	88978521	XM_928096.1	LOC645040	XP_933189.1	ILMN_1737760	0002940731	S	240	GGGTAAGCACCACTCTGCCCATTTCACCCGATGCCCATCAAAACCCCAGC	4	+	361-410		PREDICTED: Homo sapiens similar to ectonucleotide pyrophosphatase/phosphodiesterase 7 (LOC645040), mRNA.					
Homo sapiens	RefSeq	XM_001719549.1	ILMN_336445	LOC100134199	XM_001719549.1	XM_001719549.1		100134199	169217723	XM_001719549.1	LOC100134199	XP_001719601.1	ILMN_3236812	0003360288	S	187	GACGAGCACCTGGAGAAGCCGCAGCAACTCTGCGCCTACCGGAAACTGCA					PREDICTED: Homo sapiens similar to methyl-CpG binding domain protein 3-like 2 (LOC100134199), partial mRNA.					
Homo sapiens	RefSeq	XM_001715244.1	ILMN_337354	LOC100132041	XM_001715244.1	XM_001715244.1		100132041	169170106	XM_001715244.1	LOC100132041	XP_001715296.1	ILMN_3237734	0002690377	S	446	CCTCCCGGCGGCCCTGCAGGTCTCCAGCCAGAGGAAGGACTTCATGGAGC	7	-	62665758-62665759:62666402-62666449	7q11.21b	PREDICTED: Homo sapiens hypothetical protein LOC100132041 (LOC100132041), mRNA.					
Homo sapiens	RefSeq	NM_002934.2	ILMN_10025	RNASE2	NM_002934.2	NM_002934.2		6036	45243468	NM_002934.2	RNASE2	NP_002925.1	ILMN_1730628	0002640068	S	375	GGAAGCCAGGTGCCTTTAATCCACTGTAACCTCACAACTCCAAGTCCACA	14	+	20494074-20494123	14q11.2c	Homo sapiens ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin) (RNASE2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2734298] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 6401] [pmid 2734298] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 12855582] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [pmid 2734298] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	EDN; RNS2	EDN; RNS2
Homo sapiens	RefSeq	NM_025080.2	ILMN_2585	ASRGL1	NM_025080.2	NM_025080.2		80150	23308566	NM_025080.2	ASRGL1	NP_079356.2	ILMN_1810199	0006770270	S	949	GCAGCCGCCAAGGACGGCAAGCTGCACTTTGGAATTGATCCTGACGATAC	11	+	61916261-61916310	11q12.3a	Homo sapiens asparaginase like 1 (ASRGL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate L-aspartate [goid 33345] [evidence ISS]	Catalysis of the reaction: N(4)-(beta-N-acetyl-D-glucosaminyl)-L-asparagine + H2O = N-acetyl-beta-glucosaminylamine + L-aspartate [goid 3948] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ALP1; ALP; FLJ22316	ALP1; ALP; FLJ22316
Homo sapiens	RefSeq	NM_006730.2	ILMN_172646	DNASE1L1	NM_006730.2	NM_006730.2		1774	58430940	NM_006730.2	DNASE1L1	NP_006721.1	ILMN_1801230	0003710327	I	617	ATGCCTCAGGATGCAAAAGCCACATGGACAGGGCGTGGAGCAAGGAGCCG	X	-	153636909-153636958	Xq28g	Homo sapiens deoxyribonuclease I-like 1 (DNASE1L1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9205125] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [pmid 9205125] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DNL1L; XIB; DNAS1L1; DNASEX	DNL1L; XIB; DNAS1L1; DNASEX
Homo sapiens	RefSeq	NM_015599.1	ILMN_14773	PGM3	NM_015599.1	NM_015599.1		5238	7661567	NM_015599.1	PGM3	NP_056414.1	ILMN_1693620	0002480224	S	1327	CTTGGCTCTGAAGGGCTTGACTGTACAACAGTGGGATGCTCTCTATACAG	6	-	83938403-83938452	6q14.2a	Homo sapiens phosphoglucomutase 3 (PGM3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin [goid 6041] [pmid 11004509] [evidence NAS]; The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6048] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The chemical reactions and pathways involving glucose 1-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-1 [goid 19255] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: N-acetyl-D-glucosamine 1-phosphate = N-acetyl-D-glucosamine 6-phosphate [goid 4610] [evidence IEA]; Catalysis of the reaction: N-acetyl-D-glucosamine 1-phosphate = N-acetyl-D-glucosamine 6-phosphate [goid 4610] [pmid 11004509] [evidence IDA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	AGM1; PAGM; DKFZp434B187	AGM1; PAGM; DKFZp434B187
Homo sapiens	RefSeq	NM_015599.1	ILMN_14773	PGM3	NM_015599.1	NM_015599.1		5238	7661567	NM_015599.1	PGM3	NP_056414.1	ILMN_2168314	0006420739	S	1611	GCTTGGCAGTATTTCAGCTGGCTGGAGGAATTGGAGAAAGGCCCCAACCA	6	-	83935680-83935729	6q14.2a	Homo sapiens phosphoglucomutase 3 (PGM3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin [goid 6041] [pmid 11004509] [evidence NAS]; The chemical reactions and pathways resulting in the formation of UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6048] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The chemical reactions and pathways involving glucose 1-phosphate, a monophosphorylated derivative of glucose with the phosphate group attached to C-1 [goid 19255] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: N-acetyl-D-glucosamine 1-phosphate = N-acetyl-D-glucosamine 6-phosphate [goid 4610] [evidence IEA]; Catalysis of the reaction: N-acetyl-D-glucosamine 1-phosphate = N-acetyl-D-glucosamine 6-phosphate [goid 4610] [pmid 11004509] [evidence IDA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	AGM1; PAGM; DKFZp434B187	AGM1; PAGM; DKFZp434B187
Homo sapiens	RefSeq	NM_014660.2	ILMN_163510	PHF14	NM_014660.2	NM_014660.2		9678	55769547	NM_014660.2	PHF14	NP_055475.2	ILMN_1697975	0002230025	I	3091	TACCCTTCATGAGACCCAACTCTGCCACAGCTCATCCTCGGAGGCAATCC	7	+	11030333-11030382	7p21.3b	Homo sapiens PHD finger protein 14 (PHF14), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		MGC176640
Homo sapiens	RefSeq	NM_173508.1	ILMN_20629	SLC35F3	NM_173508.2	NM_173508.2		148641	142375280	NM_173508.2	SLC35F3	NP_775779.1	ILMN_1794959	0006270093	I	361	CATCGAGGAGCGGATCCTGCGCATCACTGGCTACTATGGCTACCAGCCCT	1	+	232108060-232108109	1q42.2c	Homo sapiens solute carrier family 35, member F3 (SLC35F3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		FLJ37712	FLJ37712
Homo sapiens	RefSeq	XM_938559.1	ILMN_12047	LYSMD3	NM_198273.1	NM_198273.1		116068	84370275	NM_198273.1	LYSMD3	NP_938014.1	ILMN_1766718	0001940646	A	3893	GAAATATCATGAAGCAAGGATCTAGTCAGTGTTACAGGGTAAAGGTGGAG	5	-	89847518-89847567	5q14.3g	Homo sapiens LysM, putative peptidoglycan-binding, domain containing 3 (LYSMD3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		DKFZp686F0735; FLJ13542	
Homo sapiens	RefSeq	NM_198273.1	ILMN_12047	LYSMD3	NM_198273.1	NM_198273.1		116068	84370275	NM_198273.1	LYSMD3	NP_938014.1	ILMN_2074401	0006450082	S	935	ATCACACCCCCATCACAGCAGAGAGAAATGGAAAATGGAATTGTGCCAAC	5	-	89850476-89850525	5q14.3g	Homo sapiens LysM, putative peptidoglycan-binding, domain containing 3 (LYSMD3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		DKFZp686F0735; FLJ13542	DKFZp686F0735; FLJ13542
Homo sapiens	RefSeq	NM_018302.1	ILMN_18472	C4ORF19	NM_018302.1	NM_018302.1		55286	8922827	NM_018302.1	C4orf19	NP_060772.1	ILMN_1795838	0000670475	S	1678	TAAGCTCAGCAGTTTTCACAGTAGAGCAGAAGTCCCCAGGAAACAAAGGG	4	+	37269572-37269621	4p14e	Homo sapiens chromosome 4 open reading frame 19 (C4orf19), mRNA.				FLJ11017	FLJ11017
Homo sapiens	RefSeq	NM_002870.2	ILMN_26464	RAB13	NM_002870.2	NM_002870.2		5872	34850075	NM_002870.2	RAB13	NP_002861.1	ILMN_1788180	0004390487	S	769	GAGCAGGGGAGAAATAGCAGAGGGGCTTGGAGGGTCACATAGGTAGATGG	1	-	153954462-153954511	1q21.3d	Homo sapiens RAB13, member RAS oncogene family (RAB13), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [pmid 8294494] [evidence TAS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8294494] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 8294494] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8294494] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	GIG4	GIG4
Homo sapiens	RefSeq	NM_020717.2	ILMN_26465	SHROOM4	NM_020717.2	NM_020717.2		57477	118600966	NM_020717.2	SHROOM4	NP_065768.2	ILMN_2206188	0005270064	S	9160	CGAAAATGTTATTAAGAAAACAGTTCCGGCCGGGCATGGTGGCTCACGCC	X	-	50351733-50351782	Xp11.22c	Homo sapiens shroom family member 4 (SHROOM4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A two-stranded helical polymer of the protein actin [goid 31941] [pmid 16249884] [evidence IDA]; A two-stranded helical polymer of the protein actin [goid 31941] [pmid 16684770] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 16249884] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 16684770] [evidence NAS]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [pmid 16249884] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1202	RP11-119E20.1
Homo sapiens	RefSeq	XM_926306.1	ILMN_309061	DCDC2B	NM_001099434.1	NM_001099434.1		149069	150456470	NM_001099434.1	DCDC2B	NP_001092904.1	ILMN_1683690	0002120113	S	1121	TTGTTCCTCAGGAGCCAGCACCTCCGCTGGGCTCACAGGGTACACTGCGG	1	+	32454156-32454205	1p35.1b	Homo sapiens doublecortin domain containing 2B (DCDC2B), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]			
Homo sapiens	RefSeq	XM_941505.1	ILMN_184038	C9ORF144	XM_001134423.1	XM_001134423.1		389715	113421055	XM_001134423.1	C9orf144	XP_001134423.1	ILMN_1770303	0005900463	I	4769	GGGATCTTTGGGTTCACCTCTGGCACACTCAGGTAACAACATGTCATGGT				9p13.3c	PREDICTED: Homo sapiens chromosome 9 open reading frame 144 (C9orf144), mRNA.					
Homo sapiens	RefSeq	NM_194428.1	ILMN_9474	DHX34	NM_194428.1	NM_194428.1		9704	38158019	NM_194428.1	DHX34	NP_919409.1	ILMN_1690519	0005690273	I	2951	GTGCTGGGAGTCACATTCAGATTTGGCTGACCTTCTTGTCTGAGCCAGGC	19	+	52571980-52572022:52572023-52572029	19q13.32c	Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 34 (DHX34), transcript variant 2, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0134; HRH1; DDX34	KIAA0134; HRH1; DDX34
Homo sapiens	RefSeq	NR_024207.1	ILMN_369917	KIAA1875	NR_024207.1	NR_024207.1		340390	209413714	NR_024207.1	KIAA1875		ILMN_3251237	0001030129	S	6749	GCAGGGGAAAGTCCTGCCTTGGGGAGAAAAAGGAGGGTGGGAAAAGGTCA	8	+	145172848-145172897	8q24.3g	Homo sapiens KIAA1875 (KIAA1875), non-coding RNA. XM_001714978 XM_001717214					
Homo sapiens	RefSeq	NM_033119.3	ILMN_17319	NKD1	NM_033119.3	NM_033119.3		85407	31982882	NM_033119.3	NKD1	NP_149110.1	ILMN_1692674	0005570025	S	2231	GGGATCAAGCCCTTTTCCCCAAGAGTCCCATCTCTTCTGCCATGCACGAC	16	+	49225787-49225836	16q12.1c	Homo sapiens naked cuticle homolog 1 (Drosophila) (NKD1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Catalysis of the reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal [goid 4462] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16567647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15687260] [evidence IPI]	Naked1	Naked1
Homo sapiens	Unigene	Hs.469046	ILMN_94930	HS.469046	Hs.469046		Hs.469046		23652133	BU729344			ILMN_1843387	0005960338	S	258	TCCACACCAAGCATGGGGACCCTTTCTCACAATCCTCTATGCCACAGCTG	2	-	74764177-74764226		UI-E-CL1-afd-l-19-0-UI.s1 UI-E-CL1 Homo sapiens cDNA clone UI-E-CL1-afd-l-19-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.552203	ILMN_110880	HS.552203	Hs.552203		Hs.552203		26013227	CA775690			ILMN_1831734	0003060367	S	245	TCTTGTGCTGGGGTTGTGTCCTGGGTTCATTCTCTAAAATGCTGTTCACC	1	+	222572-222621		io97a08.x1 HR85 islet Homo sapiens cDNA clone IMAGE:6134294 3, mRNA sequence					
Homo sapiens	RefSeq	NM_007032.5	ILMN_162513	TRIOBP	NM_007032.5	NM_007032.5		11078	88501739	NM_007032.5	TRIOBP	NP_008963.3	ILMN_2370588	0005220019	A	924	ACCGGCTTAGTGAGGAGATCGAGAAGAAGTGGCAGGAGCTGGAGAAGCTG	22	+	36483937-36483986	22q13.1a	Homo sapiens TRIO and F-actin binding protein (TRIOBP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 11148140] [evidence NAS]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Covalent modification of an actin molecule [goid 30047] [pmid 11148140] [evidence NAS]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [pmid 11148140] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17629495] [evidence IPI]; Interacting selectively with the GTP-bound form of the Rho protein [goid 17049] [pmid 11148140] [evidence NAS]; Interacting selectively with a class II myosin, any member of the class of 'conventional' double-headed myosins that includes muscle myosin [goid 45159] [pmid 11148140] [evidence NAS]	TARA; FLJ39315; KIAA1662; dJ37E16.4; HRIHFB2122; DFNB28	TARA; FLJ39315; KIAA1662; dJ37E16.4; HRIHFB2122; DFNB28
Homo sapiens	RefSeq	XM_001713915.1	ILMN_336849	LOC100129104	XM_001713915.1	XM_001713915.1		100129104	169173438	XM_001713915.1	LOC100129104	XP_001713967.1	ILMN_3255144	0005560324	M	2723	AGCCTTTTAGGTACTTCGGGACCTGCTCTGAGACCTCTTGCCTGACGCCC				8q24.22c	PREDICTED: Homo sapiens similar to hydroxyproline-rich glycoprotein VSP-3 (LOC100129104), mRNA.					
Homo sapiens	RefSeq	NM_080749.2	ILMN_162149	NEURL2	NM_080749.2	NM_080749.2		140825	40807486	NM_080749.2	NEURL2	NP_542787.1	ILMN_1777113	0007040170	S	938	GCGCAGCCCCTCTACGCGGTGGTGGACGTGTTTGCTTCCACAAAGAGCGT	20	-	44518914-44518963	20q13.12b	Homo sapiens neuralized homolog 2 (Drosophila) (NEURL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Terminal anchorage site of skeletal muscle cells to tendons; a specialised type of contact between the cell and the extracellular matrix in skeletal muscle [goid 5927] [evidence IEA]; A protein complex that possesses ubiquitin ligase activity; the complex is usually pentameric; for example, in mammals the subunits are pVHL, elongin B, elongin C, cullin-2 (Cul2), and Rbx1 [goid 30891] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC125935; C20orf163; MGC125934; Ozz-E3	MGC125934; MGC125935; C20orf163; Ozz-E3
Homo sapiens	RefSeq	NM_000258.1	ILMN_15625	MYL3	NM_000258.1	NM_000258.1		4634	4557776	NM_000258.1	MYL3	NP_000249.1	ILMN_1798992	0003890603	S	780	TTGCCGTCTCTGGCCCCTCTCAGGCTGTGCTTACCTGTGACAGCAGCTCT	3	-	46874418-46874467	3p21.31h	Homo sapiens myosin, light polypeptide 3, alkali; ventricular, skeletal, slow (MYL3), mRNA.	A filament of myosin found in a muscle cell of any type [goid 5859] [pmid 2789520] [evidence TAS]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; The dark-staining region of a sarcomere, in which myosin thick filaments are present; the center is traversed by the paler H zone, which in turn contains the M line [goid 31672] [pmid 16675844] [evidence IDA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [pmid 16675844] [evidence IDA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [pmid 16675844] [evidence IMP]; Any process that modulates the frequency, rate or extent of striated muscle contraction [goid 6942] [pmid 16675844] [evidence IMP]; Any process that activates or increases the rate of ATP hydrolysis by an ATPase [goid 32781] [pmid 16675844] [evidence ISS]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [pmid 16754800] [evidence IMP]; The process by which the anatomical structures of cardiac ventricle muscle is generated and organized. Morphogenesis pertains to the creation of form [goid 55010] [pmid 8673105] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [pmid 16675844] [evidence IMP]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [pmid 16675844] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 2789520] [evidence TAS]; Interacting selectively with a heavy chain of a myosin II complex [goid 32038] [pmid 16675844] [evidence NAS]	CMH8; MLC1V; VLC1	CMH8; MLC1V; VLC1
Homo sapiens	RefSeq	XM_938052.1	ILMN_38762	LOC648976	XM_938052.1	XM_938052.1		648976	89037746	XM_938052.1	LOC648976	XP_943145.1	ILMN_1724271	0000780196	S	1	ATGCAAGTTGAGATTCTGGAGGAGAAAGGGACCTGGAAGAATGCCCAGCT					PREDICTED: Homo sapiens hypothetical protein LOC648976 (LOC648976), mRNA.					
Homo sapiens	RefSeq	NM_152509.1	ILMN_23709	FLJ31568	NM_152509.1	NM_152509.1		150244	22749056	NM_152509.1	FLJ31568	NP_689722.1	ILMN_2113728	0004250301	S	1679	CCTGCTCATTCTGGAACTCCTGTCAGTCAGATGTTGGGCCTTTTGGATAG	22	-	22063202-22063251	22q11.23a	Homo sapiens FLJ31568 protein (FLJ31568), mRNA.				MGC126047; MGC126046	MGC126047; MGC126046
Homo sapiens	RefSeq	NM_152509.1	ILMN_23709	FLJ31568	NM_152509.1	NM_152509.1		150244	22749056	NM_152509.1	FLJ31568	NP_689722.1	ILMN_1812549	0005570193	S	1611	GCTGGGCGCTTGGTGAGCACGTTCTGCCTTGAGACCTGGCATTTCTTTGA	22	-	22063270-22063319	22q11.23a	Homo sapiens FLJ31568 protein (FLJ31568), mRNA.				MGC126047; MGC126046	MGC126047; MGC126046
Homo sapiens	RefSeq	NM_017550.1	ILMN_19437	MIER2	NM_017550.1	NM_017550.1		54531	45267838	NM_017550.1	MIER2	NP_060020.1	ILMN_1766159	0001010240	S	2553	CGTTCGTTTCTGTTTCTGTTTACACGTTGGAGTGGGGTCCTCCGTGGGCG	19	-	305734-305783	19p13.3j	Homo sapiens mesoderm induction early response 1, family member 2 (MIER2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	KIAA1193	KIAA1193
Homo sapiens	RefSeq	NM_005915.4	ILMN_15791	MCM6	NM_005915.4	NM_005915.4		4175	33469920	NM_005915.4	MCM6	NP_005906.2	ILMN_1798654	0005690274	S	2730	GGCTTCAGCACTTCCTTTGGTGTGTTTCCTGTCCCAGTGAAGTTGGAACC	2	-	136598167-136598216	2q21.3b	Homo sapiens minichromosome maintenance complex component 6 (MCM6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9286856] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10846177] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9286856] [evidence NAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9286856] [evidence NAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15232106] [evidence IPI]	Mis5; P105MCM; MCG40308	Mis5; P105MCM; MCG40308
Homo sapiens	RefSeq	NR_031598.1	ILMN_388524	MIR1229	NR_031598.1	NR_031598.1		100302156	269847052	NR_031598.1	MIR1229		ILMN_3310720	0007550091	S	5	TAGGGTTTGGGGGAGAGCGTGGGCTGGGGTTCAGGGACACCCTCTCACCA					Homo sapiens microRNA 1229 (MIR1229), microRNA.					
Homo sapiens	Unigene	Hs.544179	ILMN_107642	HS.544179	Hs.544179		Hs.544179		19739033	BQ014132			ILMN_1908153	0007100553	S	427	CAAGTGGAAGTCGCATGGCCTCTCTTCCTGCTTCTGGTGGCTTCTGGGAC	5	+	34684775-34684824		UI-H-ED1-axs-m-03-0-UI.s1 NCI_CGAP_ED1 Homo sapiens cDNA clone IMAGE:5833130 3, mRNA sequence					
Homo sapiens	RefSeq	XR_037039.1	ILMN_336313	LOC100134393	XR_037039.1	XR_037039.1		100134393	169165518	XR_037039.1	LOC100134393		ILMN_3236680	0004060086	S	2040	GGTGTCTAGCTTGTAAAGTTCTGGCTGTAGTTATGACCTTGGCTTCCCTG					PREDICTED: Homo sapiens misc_RNA (LOC100134393), miscRNA.					
Homo sapiens	RefSeq	NM_022373.3	ILMN_10459	HERPUD2	NM_022373.3	NM_022373.3		64224	31377616	NM_022373.3	HERPUD2	NP_071768.2	ILMN_2066348	0003370554	S	2703	GGGCATGTATCCCATCAATTGGAATCAGTACCTTAACAGAAAAAGGCAGC	7	-	35638909-35638958	7p14.2a	Homo sapiens HERPUD family member 2 (HERPUD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]		FLJ22313	FLJ22313
Homo sapiens	RefSeq	NM_022373.3	ILMN_10459	HERPUD2	NM_022373.3	NM_022373.3		64224	31377616	NM_022373.3	HERPUD2	NP_071768.2	ILMN_1785158	0001050682	S	1691	GATGGGCTTGAAGATGAGAGTGGAGAAGATGGAGGTGAAGATGCCAGTGC	7	-	35639921-35639970	7p14.2a	Homo sapiens HERPUD family member 2 (HERPUD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]		FLJ22313	FLJ22313
Homo sapiens	RefSeq	XR_038694.1	ILMN_336199	LOC100129650	XR_038694.1	XR_038694.1		100129650	169213858	XR_038694.1	LOC100129650		ILMN_3254492	0002850142	M	318	TCCCCGATTTAGACCTGCGGGTGCTTCCCCATGACCCCCACCAAAGCCCA				19q13.11c	PREDICTED: Homo sapiens misc_RNA (LOC100129650), miscRNA.					
Homo sapiens	RefSeq	NM_005755.2	ILMN_23396	EBI3	NM_005755.2	NM_005755.2		10148	14577916	NM_005755.2	EBI3	NP_005746.2	ILMN_1802653	0002810767	S	821	GAGCTGCCGGGCAACCTCAGATGACCGACTTTTCCCTTTGAGCCTCAGTT	19	+	4188208-4188257	19p13.3d	Homo sapiens Epstein-Barr virus induced 3 (EBI3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8551575] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8551575] [evidence TAS]	An immune response mediated through a body fluid [goid 6959] [pmid 8551575] [evidence TAS]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [pmid 14743498] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [pmid 14743498] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [pmid 14743498] [evidence TAS]	 [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an interleukin [goid 19965] [pmid 9342359] [evidence IPI]; Interacting selectively with the interleukin-27 receptor [goid 45523] [evidence IEA]		
Homo sapiens	Unigene	Hs.549729	ILMN_110053	HS.549729	Hs.549729		Hs.549729		83122114	DB376622			ILMN_1819982	0004810707	S	98	GACCTACAACTAACACAAAACAAGACTACACATGAAACCTGCATCCCTGG	1	-	176715119-176715168		DB376622 PLACE1 Homo sapiens cDNA clone PLACE1006439 3, mRNA sequence					
Homo sapiens	RefSeq	XR_039507.1	ILMN_342496	LOC100134563	XR_039507.1	XR_039507.1		100134563	169170616	XR_039507.1	LOC100134563		ILMN_3241598	0004010364	S	418	CCTGGCTCACGAGGTTTGCTGTAAGTACCTGGCAGTGGCATCTACCCTGA	7	+	104820863-104820912		PREDICTED: Homo sapiens misc_RNA (LOC100134563), miscRNA.					
Homo sapiens	RefSeq	NM_004474.2	ILMN_29062	FOXD2	NM_004474.3	NM_004474.3		2306	134142823	NM_004474.3	FOXD2	NP_004465.3	ILMN_1789400	0000510180	S	4509	GCGCGCTGCTCTCGGCGTTCTCTGTCCACTGGGTGTGCATTGATTTAAAC	1	+	47678784-47678833	1p33d	Homo sapiens forkhead box D2 (FOXD2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9403061] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FREAC-9; FKHL17; FREAC9	FKHL17; FREAC9
Homo sapiens	Unigene	Hs.565597	ILMN_118050	HS.565597	Hs.565597		Hs.565597		23288965	BU622756			ILMN_1913241	0001400014	S	172	CGGGGGCTGAAACAGGAATAACATCTCCAGAAAGTCCCCCATGGTCAGAA	2	+	22978139-22978188		UI-H-FL1-bgc-p-14-0-UI.s1 NCI_CGAP_FL1 Homo sapiens cDNA clone UI-H-FL1-bgc-p-14-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001720281.1	ILMN_342517	LOC121906	XM_001720281.1	XM_001720281.1		121906	169206321	XM_001720281.1	LOC121906	XP_001720333.1	ILMN_3284673	0006620735	M	486	CACAGGAGTGACAGCTGACAGCAGATCCCGGGAACAGAGGGCGCAATATA				13q32.1c	PREDICTED: Homo sapiens similar to hCG30646 (LOC121906), mRNA.					
Homo sapiens	Unigene	Hs.560906	ILMN_114525	HS.560906	Hs.560906		Hs.560906		78456978	DA173998			ILMN_1871413	0004280050	S	228	AGACTGGGAGTTAGGGGACAACAAGGGGACATCGGGCACACTGCTGCTCT	2	-	71084537-71084557:71085475-71085503		DA173998 BRAMY2 Homo sapiens cDNA clone BRAMY2037005 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002945.2	ILMN_176588	RPA1	NM_002945.2	NM_002945.2		6117	20070171	NM_002945.2	RPA1	NP_002936.1	ILMN_2049642	0001510440	S	2565	CTTGCTGTCCCCTAAGGAAATCCGAGCGGCTACAAAGCGTTTCTTTACTT	17	+	1747890-1747939	17p13.3d	Homo sapiens replication protein A1, 70kDa (RPA1), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9826763] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11080452] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [pmid 16135809] [evidence IPI]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 16135809] [evidence IDA]	The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 8756712] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8756712] [evidence TAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 8756712] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 8756712] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1311258] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10825162] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1311258] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15897895] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RPA70; REPA1; RF-A; HSSB; RP-A	RPA70; REPA1; RF-A; HSSB; RP-A
Homo sapiens	RefSeq	NM_018058.4	ILMN_27995	CRTAC1	NM_018058.4	NM_018058.4		55118	50345276	NM_018058.4	CRTAC1	NP_060528.3	ILMN_1658384	0001660075	S	2605	ACAGATGTGCCCAGGGAGGTGGTGTCACTGCACAGGAAGTATGAGGACTT	10	-	99657800-99657849	10q24.2a	Homo sapiens cartilage acidic protein 1 (CRTAC1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ10320; ASPIC1; CEP-68	ASPIC1; FLJ10320; CEP-68
Homo sapiens	RefSeq	NM_018114.4	ILMN_22914	DALRD3	NM_001009996.1	NM_001009996.1		55152	58331229	NM_001009996.1	DALRD3	NP_001009996.1	ILMN_1715703	0000650273	A	269	GGGTCTGTCTCTCCAACTGCAGCGGTCCGCCGTCTTCGAGCGCGTCCTCA	3	-	49055618-49055667	3p21.31d	Homo sapiens DALR anticodon binding domain containing 3 (DALRD3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ10496	FLJ10496
Homo sapiens	RefSeq	NM_145731.2	ILMN_20235	SYNGR1	NM_145731.2	NM_145731.2		9145	39777618	NM_145731.2	SYNGR1	NP_663783.1	ILMN_1721712	0006770768	I	1132	GGGCTCCTGGTCTGGCTCTGTCCTCATGTGCTATGTGACCCTGACAAACC	22	+	38104135-38104184	22q13.1d	Homo sapiens synaptogyrin 1 (SYNGR1), transcript variant 1b, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9760194] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC:1939	MGC:1939
Homo sapiens	RefSeq	XM_001716272.1	ILMN_339377	LOC100133913	XM_001716272.1	XM_001716272.1		100133913	169217036	XM_001716272.1	LOC100133913	XP_001716324.1	ILMN_3239155	0004390500	S	733	TGCACGTTTGGTGGGATTTGGTCATCAGGGGTGGACATGCTGCCCAATGG					PREDICTED: Homo sapiens hypothetical protein LOC100133913 (LOC100133913), mRNA.					
Homo sapiens	RefSeq	NM_000843.2	ILMN_170519	GRM6	NM_000843.3	NM_000843.3		2916	110611175	NM_000843.3	GRM6	NP_000834.2	ILMN_1715977	0003780204	S	5453	CACCTCCCAAAGTGTTCGGATTACAAACGTGAGCCATCGCACCTAGCCTC	5	-	178405968-178406017	5q35.3c	Homo sapiens glutamate receptor, metabotropic 6 (GRM6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9215706] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor coupled to effectors through GTP-binding proteins [goid 7216] [pmid 9215706] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm [goid 9584] [pmid 9215706] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	DKFZp686H1993; GPRC1F; MGLUR6; CSNB1B; mGlu6	DKFZp686H1993; GPRC1F; MGLUR6; mGlu6
Homo sapiens	RefSeq	NM_178270.1	ILMN_25519	ATG4A	NM_178270.1	NM_178270.1		115201	30795247	NM_178270.1	ATG4A	NP_840054.1	ILMN_2313782	0000620168	A	1864	GCAGGCCATGCGGCCTCTGTCACATCTACTCAACTCTGCTGTTGACATGC	X	+	107284328-107284377	Xq22.3c	Homo sapiens ATG4 autophagy related 4 homolog A (S. cerevisiae) (ATG4A), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12446702] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12446702] [evidence ISS]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 12446702] [evidence ISS]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 12446702] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12473658] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 15169837] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 12446702] [evidence ISS]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [pmid 12446702] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [pmid 12446702] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12446702] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12446702] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [pmid 12473658] [evidence IDA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [pmid 15169837] [evidence IDA]	APG4A; AUTL2	APG4A; AUTL2
Homo sapiens	RefSeq	NM_178270.1	ILMN_25519	ATG4A	NM_178270.1	NM_178270.1		115201	30795247	NM_178270.1	ATG4A	NP_840054.1	ILMN_3307158	0006060358	A	1855	TTGGGCTTTGCAGGCCATGCGGCCTCTGTCACATCTACTCAACTCTGCTG	X	+	107284319-107284368	Xq22.3c	Homo sapiens ATG4 autophagy related 4 homolog A (S. cerevisiae) (ATG4A), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12446702] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12446702] [evidence ISS]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 12446702] [evidence ISS]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 12446702] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12473658] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 15169837] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 12446702] [evidence ISS]; The process of directing proteins towards the vacuole using signals contained within the protein [goid 6623] [pmid 12446702] [evidence ISS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [pmid 12446702] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12446702] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12446702] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [pmid 12473658] [evidence IDA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [pmid 15169837] [evidence IDA]	APG4A; AUTL2	APG4A; AUTL2
Homo sapiens	RefSeq	NM_178555.2	ILMN_165166	CCDC158	NM_001042784.1	NM_001042784.1		339965	112420967	NM_001042784.1	CCDC158	NP_001036249.1	ILMN_1727511	0006900747	S	3102	CGCAGGAGACAGGGAAGATCCCTCTGGTTGCTTCACATTCACATCTGCAG	4	-	77466192-77466192:77469077-77469125	4q21.1b	Homo sapiens coiled-coil domain containing 158 (CCDC158), mRNA.				MGC35086	MGC35086
Homo sapiens	RefSeq	NM_003915.2	ILMN_22052	CPNE1	NM_003915.2	NM_003915.2		8904	23397694	NM_003915.2	CPNE1	NP_003906.1	ILMN_2276002	0003290132	I	3	CGAAGGCTTTGTAGAGTTCAGAAATGAGGCTGACTATAAGGCTGCTCTGT	20	-	33705193-33705242	20q11.22b	Homo sapiens copine I (CPNE1), transcript variant 3, mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9430674] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 9430674] [evidence TAS]	Interacting selectively with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 1786] [pmid 9430674] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9430674] [evidence TAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [pmid 9430674] [evidence TAS]	CPN1; COPN1; MGC1142	CPN1; COPN1; MGC1142
Homo sapiens	RefSeq	NM_003915.2	ILMN_22052	CPNE1	NM_003915.2	NM_003915.2		8904	23397694	NM_003915.2	CPNE1	NP_003906.1	ILMN_2276000	0004250020	I	301	AATGCTGTACATGTTCTTGTTGATAACAATGGGCAAGGTCTAGGACAGGC	20	-	33704895-33704944	20q11.22b	Homo sapiens copine I (CPNE1), transcript variant 3, mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9430674] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 9430674] [evidence TAS]	Interacting selectively with phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine [goid 1786] [pmid 9430674] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9430674] [evidence TAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [pmid 9430674] [evidence TAS]	CPN1; COPN1; MGC1142	CPN1; COPN1; MGC1142
Homo sapiens	RefSeq	NM_021088.2	ILMN_30208	ZNF2	NM_021088.2	NM_021088.2		7549	62865880	NM_021088.2	ZNF2	NP_066574.2	ILMN_1812222	0000620356	I	426	CTCTGCCCTTGTCCACAAGGAGAGCACACAGGAGAGAATGGCTGCTGTGT	2	+	95205662-95205698:95205699-95205711	2q11.1c	Homo sapiens zinc finger protein 2 (ZNF2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1945843] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 1945843] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A1-5; ZNF661; Zfp661	A1-5; ZNF661; Zfp661
Homo sapiens	RefSeq	NM_021088.2	ILMN_30208	ZNF2	NM_021088.2	NM_021088.2		7549	62865880	NM_021088.2	ZNF2	NP_066574.2	ILMN_1687884	0000380152	A	3782	ACGACCCTATTACTCTGTTCACCCTAGAGCAGACGAACGGCAGGGAAGAC	2	+	95213620-95213669	2q11.1c	Homo sapiens zinc finger protein 2 (ZNF2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1945843] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 1945843] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A1-5; ZNF661; Zfp661	A1-5; ZNF661; Zfp661
Homo sapiens	RefSeq	NM_152748.2	ILMN_163848	KIAA1324L	NM_152748.2	NM_152748.2		222223	33356135	NM_152748.2	KIAA1324L	NP_689961.2	ILMN_1652371	0002650753	S	2807	TGTCCTCATACCTGTCACATTGGTGATCTCACAGAGGAGGGCCATGCCGC	7	-	86347597-86347646	7q21.12a	Homo sapiens KIAA1324-like (KIAA1324L), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ31340	FLJ31340
Homo sapiens	RefSeq	XM_945296.1	ILMN_35914	LOC647038	XM_934205.2	XM_934205.2		647038	113412862	XM_934205.2	LOC647038	XP_939298.1	ILMN_1685759	0002060634	S	78	CCAACCTCCTCAATCCAAATGGAGATGCCTGTGAAAGAGGATGGGCCAGG	2	-	59402928-59402957:59468701-59468720	2p16.1b	PREDICTED: Homo sapiens hypothetical LOC647038 (LOC647038), mRNA.					
Homo sapiens	RefSeq	XM_001716538.1	ILMN_345273	LOC729722	XM_001716538.1	XM_001716538.1		729722	169208428	XM_001716538.1	LOC729722	XP_001716590.1	ILMN_3226251	0005290494	A	307	AACAAGGCTGGCCACACACCACTTTTACTGGCCATAAGGAAAAGAAGTGA	15	+	18344266-18344271:18346468-18346511	15q11.1b	PREDICTED: Homo sapiens similar to hCG1793014 (LOC729722), mRNA.					
Homo sapiens	RefSeq	XM_929382.1	ILMN_36502	C19ORF67	XM_929382.1	XM_929382.1		646457	89052436	XM_929382.1	C19orf67	XP_934475.1	ILMN_1662187	0002650368	S	61	CCAGACGCCTTGGAACCTGGGACGCCGCCCTGCGGAGACCCCTCCAGGTC	19	-	14057329-14057378	19p13.12c	PREDICTED: Homo sapiens chromosome 19 open reading frame 67 (C19orf67), mRNA.					
Homo sapiens	RefSeq	NM_006950.2	ILMN_22497	SYN1	NM_006950.2	NM_006950.2		6853	19924098	NM_006950.2	SYN1	NP_008881.2	ILMN_1783837	0001230240	I	2180	CAGGACGAGGTGAAAGCTGAGACCATCCGCAGCCTGAGGAAGTCTTTCGC	X	-	47317225-47317274	Xp11.23f	Homo sapiens synapsin I (SYN1), transcript variant Ia, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 2110562] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 2110562] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SYN1a; SYN1b; SYNI	SYN1a; SYN1b; SYNI
Homo sapiens	RefSeq	NM_018087.3	ILMN_26078	TMEM48	NM_018087.3	NM_018087.3		55706	37059744	NM_018087.3	TMEM48	NP_060557.2	ILMN_1749930	0004200601	S	2066	CCTCATGCTTCCAGTAAACCACCCCGGATTTCAGGAAGCCTTGTGGACAC	1	-	54238088-54238137	1p32.3c	Homo sapiens transmembrane protein 48 (TMEM48), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 16600873] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [pmid 16600873] [evidence NAS]; Any process that establish the spatial arrangement of nuclear pores within the nuclear envelope [goid 31081] [pmid 16600873] [evidence IMP]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a nuclear pore complex [goid 51292] [pmid 16600873] [evidence IMP]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [pmid 16600873] [evidence IMP]	FLJ12556; NDC1; NET3; FLJ34120; FLJ10407; RP4-654H19.1	NET3; FLJ34120; FLJ10407; RP4-654H19.1; FLJ12556; NDC1
Homo sapiens	RefSeq	NM_001005179.1	ILMN_162582	OR56A4	NM_001005179.2	NM_001005179.2		120793	94967015	NM_001005179.2	OR56A4	NP_001005179.2	ILMN_1705551	0000830307	S	747	CAATCAGCTCTACCAGTTTGTGGCAGGCTGGACTCTGTTGGGCTCTGATC	11	-	6023582-6023631	11p15.4c	Homo sapiens olfactory receptor, family 56, subfamily A, member 4 (OR56A4), mRNA.				OR11-49	OR11-49
Homo sapiens	RefSeq	NM_001003714.1	ILMN_13901	ATP5J2	NM_001003714.1	NM_001003714.1		9551	51479131	NM_001003714.1	ATP5J2	NP_001003714.1	ILMN_2307883	0004760112	A	247	CTTGGCCCGAGCCCCTCCGTGAGGAACACAATCTCAATCGTTGCTGAATC	7	-	99055865-99055914	7q22.1b	Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2 (ATP5J2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 11959398] [evidence NAS]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 12110673] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 11959398] [evidence NAS]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12110673] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ATP5JL	ATP5JL
Homo sapiens	RefSeq	XM_926640.1	ILMN_39345	LOC653261	XM_926640.1	XM_926640.1		653261	88942955	XM_926640.1	LOC653261	XP_931733.1	ILMN_1694280	0001850563	S	139	GACCCCTGCCTCTGTACCCACTTGATCTACGCCTTTGCTGGAATGCAGAA	1	+	111625779-111625828		PREDICTED: Homo sapiens similar to Acidic mammalian chitinase precursor (AMCase) (TSA1902) (LOC653261), mRNA.					
Homo sapiens	RefSeq	NM_014329.3	ILMN_21643	EDC4	NM_014329.3	NM_014329.3		23644	45827770	NM_014329.3	EDC4	NP_055144.3	ILMN_1665212	0006960037	S	4565	AGGTATTGCGCCTGCTTGGGTTCTGCCATGCCTGGAGCATGACCCTGAGA	16	+	66475745-66475794	16q22.1b	Homo sapiens enhancer of mRNA decapping 4 (EDC4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7520377] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9067524] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16364915] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	HEDLS; RCD-8; Ge-1	HEDLS; RCD-8; Ge-1
Homo sapiens	RefSeq	XM_931996.1	ILMN_33896	LOC643035	XM_931996.1	XM_931996.1		643035	88943744	XM_931996.1	LOC643035	XP_937089.1	ILMN_1746716	0004060382	A	1100	GAGGGCACCAGGCACAACGACATCGAGCTCTACAGCCAGTACCTGGAGGG	1	-	212845685-212845734		PREDICTED: Homo sapiens similar to CG33096-PB, isoform B, transcript variant 2 (LOC643035), mRNA.					
Homo sapiens	RefSeq	XR_000960.1	ILMN_165531	MGC34800	XR_017712.1	XR_017712.1		162137	113418123	XR_017712.1	MGC34800		ILMN_1658111	0006200427	A	2056	CCAGGAGAACAAGGAGATGGTCTAAACTAGCTCAACACACGGGACTCGCG				16p11.2a	PREDICTED: Homo sapiens hypothetical protein MGC34800 (MGC34800), misc RNA.					
Homo sapiens	RefSeq	NM_016035.3	ILMN_18451	COQ4	NM_016035.3	NM_016035.3		51117	166795284	NM_016035.3	COQ4	NP_057119.2	ILMN_3234979	0003990370	S	1490	GGGCTACACCCAATTCCAAAAGCCTGAGAAGAGAGAAGTGGAGGGGGAGG	9	+	131096269-131096318	9q34.11b	Homo sapiens coenzyme Q4 homolog (S. cerevisiae) (COQ4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [evidence IEA]		CGI-92	CGI-92
Homo sapiens	RefSeq	XM_001725648.1	ILMN_342660	LOC100134687	XM_001725648.1	XM_001725648.1		100134687	169170619	XM_001725648.1	LOC100134687	XP_001725700.1	ILMN_3241780	0000450372	S	263	CCAAACTCATGCCAGGAGAGTGGCCACCTACTTGCCAATTATATGTCATA	7	-	106694489-106694538		PREDICTED: Homo sapiens hypothetical protein LOC100134687 (LOC100134687), mRNA.					
Homo sapiens	RefSeq	NM_017977.1	ILMN_29813	AIM1L	NM_017977.2	NM_017977.2		55057	109150428	NM_017977.2	AIM1L	NP_060447.2	ILMN_1776916	0000610397	S	1383	GCATGTGACAGTCCCTGGACAACCTCCTGCTCCATCCACTACAAGAAGGA	1	-	26544453-26544502	1p36.11b	Homo sapiens absent in melanoma 1-like (AIM1L), mRNA.			Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	FLJ38020; FLJ10040; DKFZp434L1713	FLJ10040
Homo sapiens	RefSeq	NM_001032278.1	ILMN_12831	MMP28	NM_024302.3	NM_024302.3		79148	73808269	NM_024302.3	MMP28	NP_077278.1	ILMN_1752952	0000830685	A	385	GTACGGATACCTCAATGAACAGGTCCCCAAAGCTCCCACCTCCACTCGAT	17	-	34106263-34106312	17q12b	Homo sapiens matrix metallopeptidase 28 (MMP28), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 11121398] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11121398] [evidence TAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11255011] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MMP25; MM28	MMP25; MM28
Homo sapiens	RefSeq	NM_024302.3	ILMN_12831	MMP28	NM_024302.3	NM_024302.3		79148	73808269	NM_024302.3	MMP28	NP_077278.1	ILMN_1791508	0004810477	I	2256	AACGGTGTCATATTTAGTCAGAGGCCCCACCCCCAGGAAGCATGGATGGG	17	-	34093034-34093083	17q12b	Homo sapiens matrix metallopeptidase 28 (MMP28), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 11121398] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11121398] [evidence TAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11255011] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MMP25; MM28	MMP25; MM28
Homo sapiens	RefSeq	XM_927834.1	ILMN_35319	LOC644735	XM_927834.1	XM_927834.1		644735	88961598	XM_927834.1	LOC644735	XP_932927.1	ILMN_1690899	0003930554	S	1	ATGAACTTGGTAGTGGATCCAGTGGGGCAGCTGCTGAGGCCGAAGGTCAA	3	-	17763808-17763857		PREDICTED: Homo sapiens similar to Puromycin-sensitive aminopeptidase (PSA) (LOC644735), mRNA.					
Homo sapiens	RefSeq	NM_032517.4	ILMN_1376	LYZL1	NM_032517.4	NM_032517.4		84569	73390142	NM_032517.4	LYZL1	NP_115906.3	ILMN_2111445	0001450379	S	577	GGCTGGAAGAAACATTGTGAGGGCAGAGACCTGTCCGAGTGGAAAAAAGG	10	+	29599923-29599972	10p11.23b	Homo sapiens lysozyme-like 1 (LYZL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	PRO1278; LYC2; KAAG648; MGC33408; bA534G20.1	PRO1278; LYC2; KAAG648; MGC33408; bA534G20.1
Homo sapiens	RefSeq	NM_032517.4	ILMN_1376	LYZL1	NM_032517.4	NM_032517.4		84569	73390142	NM_032517.4	LYZL1	NP_115906.3	ILMN_1787196	0007570725	S	19	TTACTCGCGCCTCGTTAGAATCAGACATGGCTTCAGGGGATGCAGGACGC	10	+	29578008-29578046:29578047-29578057	10p11.23b	Homo sapiens lysozyme-like 1 (LYZL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	PRO1278; LYC2; KAAG648; MGC33408; bA534G20.1	PRO1278; LYC2; KAAG648; MGC33408; bA534G20.1
Homo sapiens	RefSeq	NM_019556.1	ILMN_25898	MOSPD1	NM_019556.1	NM_019556.1		56180	9506542	NM_019556.1	MOSPD1	NP_062456.1	ILMN_1727798	0002680433	S	2122	AACCATGTGAGGAGCCTAAGTCATTAAACGGATCATGTCTGTACATTGTG	X	-	134021848-134021897	Xq26.3a	Homo sapiens motile sperm domain containing 1 (MOSPD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	DJ473B4	DJ473B4
Homo sapiens	RefSeq	XM_001719211.1	ILMN_351256	LOC100134539	XM_001719211.1	XM_001719211.1		100134539	169170799	XM_001719211.1	LOC100134539	XP_001719263.1	ILMN_3248282	0006040386	S	181	GAAGGTTGTAGGGGGCCCCAGGGCAGGTCCTGGAGCTCAGGCAGCCGGCA	7	+	151487700-151487749		PREDICTED: Homo sapiens hypothetical protein LOC100134539 (LOC100134539), mRNA.					
Homo sapiens	RefSeq	NM_024420.1	ILMN_2369	PLA2G4A	NM_024420.1	NM_024420.1		5321	23943919	NM_024420.1	PLA2G4A	NP_077734.1	ILMN_1803561	0004730360	S	2477	CGTACTGATCATGAGAGACTGGCTGATACTCAAAGTTGCAGTTACTTAGC	1	+	185224358-185224407	1q31.1a	Homo sapiens phospholipase A2, group IVA (cytosolic, calcium-dependent) (PLA2G4A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8381049] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9430701] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the formation of platelet activating factor, 1-O-alkyl-2-acetyl-sn-glycerol 3-phosphocholine, where alkyl = hexadecyl or octadecyl. Platelet activating factor is an inflammatory mediator released from a variety of cells in response to various stimuli [goid 6663] [pmid 9430701] [evidence NAS]; The chemical reactions and pathways involving icosanoids, any of a group of C20 polyunsaturated fatty acids [goid 6690] [pmid 9430701] [evidence NAS]; The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]; Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [pmid 8381049] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PLA2G4; cPLA2-alpha	PLA2G4; cPLA2-alpha
Homo sapiens	RefSeq	NM_020724.1	ILMN_26801	RNF150	NM_020724.1	NM_020724.1		57484	58331203	NM_020724.1	RNF150	NP_065775.1	ILMN_1767446	0003440133	S	4572	GGAGGTCCTGCTGCAAACCCCCTGAGCCTTTGCCATTCACTACTTACCAA	4	-	142007352-142007401	4q31.21a	Homo sapiens ring finger protein 150 (RNF150), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC125502	MGC125502
Homo sapiens	RefSeq	XM_001715596.1	ILMN_337990	LOC100134320	XM_001715596.1	XM_001715596.1		100134320	169217011	XM_001715596.1	LOC100134320	XP_001715648.1	ILMN_3238159	0005310403	S	578	GAACCCGGACTCCAGCTTGGACGACACCTCCTACAGCCTGTCCGAATGGA					PREDICTED: Homo sapiens hypothetical protein LOC100134320 (LOC100134320), mRNA.					
Homo sapiens	RefSeq	NM_182592.1	ILMN_177242	YIPF7	NM_182592.2	NM_182592.2		285525	148664221	NM_182592.2	YIPF7	NP_872398.2	ILMN_1769144	0002510093	S	467	CACTGGACCCATTCTTTTTTGCGTAGCCCTGGGAGCCACCTTGCTTCTGG	4	-	44626798-44626799:44631420-44631467	4p13b	Homo sapiens Yip1 domain family, member 7 (YIPF7), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC120164; FLJ39576; FinGER9	FLJ39576; FinGER9
Homo sapiens	RefSeq	NM_000411.4	ILMN_2816	HLCS	NM_000411.4	NM_000411.4		3141	46255044	NM_000411.4	HLCS	NP_000402.3	ILMN_1792669	0006330400	S	5374	ATACAGCATGGTCGCCCCTTGCCCTGGAGTCTGGGAACAAAGAGAGGAGC	21	-	38123742-38123791	21q22.13a	Homo sapiens holocarboxylase synthetase (biotin-(proprionyl-Coenzyme A-carboxylase (ATP-hydrolysing)) ligase) (HLCS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + biotin + apo-(acetyl-CoA:carbon-dioxide ligase (ADP forming)) = AMP + diphosphate + (acetyl-CoA:carbon-dioxide ligase (ADP forming)) [goid 4077] [evidence IEA]; Catalysis of the reaction: ATP + biotin + apo-(3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)) [goid 4078] [evidence IEA]; Catalysis of the reaction: ATP + biotin + apo-(methylmalonyl-CoA:pyruvate carboxytransferase) = AMP + diphosphate + (methylmalonyl-CoA:pyruvate carboxytransferase) [goid 4079] [evidence IEA]; Catalysis of the reaction: ATP + biotin + apo-(propanoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (propanoyl-CoA:carbon-dioxide ligase (ADP-forming)) [goid 4080] [pmid 7842009] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	HCS	HCS
Homo sapiens	RefSeq	NM_000411.4	ILMN_2816	HLCS	NM_000411.4	NM_000411.4		3141	46255044	NM_000411.4	HLCS	NP_000402.3	ILMN_2191402	0001850114	S	5638	GCAAGTCTACCAAAATAAACTAAGACTTTCTATGTGGTTTGGGCTCCCTC	21	-	38123478-38123527	21q22.13a	Homo sapiens holocarboxylase synthetase (biotin-(proprionyl-Coenzyme A-carboxylase (ATP-hydrolysing)) ligase) (HLCS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + biotin + apo-(acetyl-CoA:carbon-dioxide ligase (ADP forming)) = AMP + diphosphate + (acetyl-CoA:carbon-dioxide ligase (ADP forming)) [goid 4077] [evidence IEA]; Catalysis of the reaction: ATP + biotin + apo-(3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)) [goid 4078] [evidence IEA]; Catalysis of the reaction: ATP + biotin + apo-(methylmalonyl-CoA:pyruvate carboxytransferase) = AMP + diphosphate + (methylmalonyl-CoA:pyruvate carboxytransferase) [goid 4079] [evidence IEA]; Catalysis of the reaction: ATP + biotin + apo-(propanoyl-CoA:carbon-dioxide ligase (ADP-forming)) = AMP + diphosphate + (propanoyl-CoA:carbon-dioxide ligase (ADP-forming)) [goid 4080] [pmid 7842009] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	HCS	HCS
Homo sapiens	RefSeq	XM_941338.1	ILMN_43797	LOC649094	XM_941338.1	XM_941338.1		649094	88959130	XM_941338.1	LOC649094	XP_946431.1	ILMN_1725361	0005900324	I	130	CTTCTGCTACTCCCTTGCTCAACTCCTTGTTTGTTCCAGGTGTATTCTGG					PREDICTED: Homo sapiens similar to Nucleoporin-like protein RIP (HIV-1 Rev-binding protein) (Rev interacting protein) (Rev/Rex activation domain-binding protein), transcript variant 1 (LOC649094), mRNA.					
Homo sapiens	RefSeq	NM_021801.3	ILMN_9549	MMP26	NM_021801.3	NM_021801.3		56547	73808265	NM_021801.3	MMP26	NP_068573.2	ILMN_2206080	0006250543	S	696	GTACCCCACTTACTGGTATCACGACCCTAGAACCTTCCAGCTCAGTGCCG	11	+	4969852-4969901	11p15.4c	Homo sapiens matrix metallopeptidase 26 (MMP26), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10801841] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10987280] [evidence NAS]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC126592; MGC126590	MGC126592; MGC126590
Homo sapiens	RefSeq	NM_023928.2	ILMN_22643	AACS	NM_023928.3	NM_023928.3		65985	111154071	NM_023928.3	AACS	NP_076417.2	ILMN_1698554	0001580504	S	3034	GTGCTGCCTCCACCTGAGAGTTGCTAGGGGGTTCTTGTCGAGATCATGTC	12	+	124193537-124193586	12q24.31f	Homo sapiens acetoacetyl-CoA synthetase (AACS), mRNA.				FLJ41251; SUR-5; FLJ12389; ACSF1	SUR-5; FLJ12389
Homo sapiens	RefSeq	NM_001037671.1	ILMN_10393	C12ORF74	NM_001037671.1	NM_001037671.1		338809	83415164	NM_001037671.1	C12orf74	NP_001032760.1	ILMN_3242407	0007560475	S	1241	GAACTTTCAGCACGGCCCCCTGGTTGTAGCAATGGATCTGCCATCTCTGA	12	+	91626060-91626109	12q22a	Homo sapiens chromosome 12 open reading frame 74 (C12orf74), mRNA.				MGC125584	MGC125584
Homo sapiens	RefSeq	NM_018089.1	ILMN_170364	ANKZF1	NM_001042410.1	NM_001042410.1		55139	109150434	NM_001042410.1	ANKZF1	NP_001035869.1	ILMN_1677487	0000580598	S	2163	TGCTGGAGTTGTGGGGCATCCCTCCAAGGCCTGACTCCCTTTCACTACCT	2	+	219809292-219809341	2q35f	Homo sapiens ankyrin repeat and zinc finger domain containing 1 (ANKZF1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF744; FLJ13144; FLJ10415	ZNF744; FLJ10415
Homo sapiens	RefSeq	NM_001003699.2	ILMN_371449	RREB1	NM_001003699.2	NM_001003699.2		6239	208609942	NM_001003699.2	RREB1	NP_001003699.1	ILMN_3307409	0004810377	A	7756	ACGCTGCGGTGAGATGTAGCAGTAATCAGCTCCCAGCGACGTGTGTAGCT	6	+	7251338-7251387	6p24.3c	Homo sapiens ras responsive element binding protein 1 (RREB1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9305772] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9305772] [evidence TAS]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9305772] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8816445] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8816445] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8816445] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9305772] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_929476.1	ILMN_139287	ZNF630	XM_929476.1	XM_929476.1		57232	89059576	XM_929476.1	ZNF630	XP_934569.1	ILMN_1779341	0004850615	A	2195	GGAAGGCCTATTCCCAGAAGTCAGTCCTCATTGTCTATGGGAAAACTCAC	X	-	47802745-47802794	Xp11.23e	PREDICTED: Homo sapiens zinc finger protein 630, transcript variant 2 (ZNF630), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_933331.1	ILMN_37413	LOC646009	XM_933331.1	XM_933331.1		646009	89028135	XM_933331.1	LOC646009	XP_938424.1	ILMN_1703570	0001260682	S	61	AATAAAGGAAGCGTAGTAGGTTTACCTTGAGATTTCACTGAGCTAATATA	8	-	70522911-70522960		PREDICTED: Homo sapiens hypothetical protein LOC646009 (LOC646009), mRNA.					
Homo sapiens	RefSeq	NM_199127.1	ILMN_9361	GGTLC2	NM_199127.1	NM_199127.1		91227	40353747	NM_199127.1	GGTLC2	NP_954578.1	ILMN_2403896	0000840475	A	225	GGTCCGCTCCCCGGTCAGCGAGATCCTGTTCAATGATGAAATGGATGACT	22	+	21319236-21319285	22q11.22b	Homo sapiens gamma-glutamyltransferase light chain 2 (GGTLC2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence NAS]	Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]; Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence NAS]	MGC96916	MGC96916
Homo sapiens	RefSeq	NM_172364.3	ILMN_15285	CACNA2D4	NM_172364.4	NM_172364.4		93589	132566535	NM_172364.4	CACNA2D4	NP_758952.4	ILMN_1696317	0005810221	A	5043	GCCCCCTTACAGCAGAAGACACTGCAGCTCGAAGACAGCTTAAGTGGCAG	12	-	1901373-1901422	12p13.33b	Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 4 (CACNA2D4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RCD4	RCD4
Homo sapiens	RefSeq	NM_018956.3	ILMN_12570	C9ORF9	NM_018956.3	NM_018956.3		11092	33285005	NM_018956.3	C9orf9	NP_061829.3	ILMN_1813837	0005860709	S	551	CGGCGGCGTGGTCAGCCTCATCCCCCTCATCCTAGACTTAATGAAAGAAT	9	+	134753552-134753601	9q34.13b	Homo sapiens chromosome 9 open reading frame 9 (C9orf9), mRNA.					
Homo sapiens	RefSeq	XM_941418.1	ILMN_33912	LOC442208	XM_941418.1	XM_941418.1		442208	88999128	XM_941418.1	LOC442208	XP_946511.1	ILMN_1654673	0005390286	A	390	GGGACAAGGATTAGCACCAGCACTGAGTAAAGCTGCCTCAGAGTCCCCCC					PREDICTED: Homo sapiens similar to 40S ribosomal protein S2 (LOC442208), mRNA.					
Homo sapiens	RefSeq	NM_002113.1	ILMN_6403	CFHR1	NM_002113.2	NM_002113.2		3078	118442838	NM_002113.2	CFHR1	NP_002104.2	ILMN_1754137	0001470709	S	144	CTCACGGATATCCTCTGTTGGGGGAGAAGCAACATTTTGTGATTTTCCAA	1	+	195055627-195055655:195061230-195061250	1q31.3c	Homo sapiens complement factor H-related 1 (CFHR1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1711047] [evidence TAS]	Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [pmid 1711047] [evidence TAS]		CFHR1P; H36-2; HFL1; FHR1; MGC104329; CFHL1P; CFHL1; CFHL; HFL2; H36-1	HFL1; FHR1; MGC104329; CFHL1; CFHL; H36-1
Homo sapiens	RefSeq	NM_005938.1	ILMN_180349	FOXO4	NM_005938.2	NM_005938.2		4303	103472002	NM_005938.2	FOXO4	NP_005929.2	ILMN_1712095	0004480575	S	3219	GTGTCAGCGCCTGGCCTACCCAGATTGTATCATGTGCTAGATTGGAGTGG	X	+	70240007-70240056	Xq13.1c	Homo sapiens forkhead box O4 (FOXO4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16272144] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16272144] [evidence IDA]	Progression through G1 phase, one of two 'gap' phases in the mitotic cell cycle; G1 is the interval between the completion of mitosis and the beginning of DNA synthesis [goid 80] [pmid 10783894] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 15126506] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10783894] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10783894] [evidence IDA]; A signal transduction-based surveillance mechanism that acts during a mitotic cell cycle to ensure accurate chromosome segregation by preventing entry into mitosis in the presence of damaged DNA [goid 7095] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10783894] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 10217147] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 12761217] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle cell differentiation [goid 51151] [pmid 16054032] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10783894] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 16054032] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 15126506] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	AFX1; AFX; FOXO4; MGC120490; MLLT7	AFX1; AFX; FOXO4; MGC120490
Homo sapiens	RefSeq	NM_003252.3	ILMN_24227	TIAL1	NM_003252.3	NM_003252.3		7073	77695910	NM_003252.3	TIAL1	NP_003243.1	ILMN_2351309	0005560504	A	3241	AGGGAGTGCAAATGTTTTGGCAATGTATTCAAAATGCTGGCCTGGGCACC	10	-	121334271-121334320	10q26.11d	Homo sapiens TIA1 cytotoxic granule-associated RNA binding protein-like 1 (TIAL1), transcript variant 1, mRNA. XM_945560 XM_945564 XM_945566 XM_945569 XM_945570 XM_945572 XM_945573	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 1326761] [evidence TAS]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The self-renewing division of a stem cell. A stem cell is an undifferentiated cell, in the embryo or adult, that can undergo unlimited division and give rise to one or several different cell types [goid 17145] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9207209] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 1326761] [evidence TAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 1326761] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9207209] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1326761] [evidence TAS]	TCBP; TIAR; MGC33401	TCBP; TIAR; MGC33401
Homo sapiens	Unigene	Hs.544609	ILMN_107991	HS.544609	Hs.544609		Hs.544609		2321475	AA551223			ILMN_1907700	0000990093	S	145	GCTGAACCACAACCAACACTGTCTCCTGCTCTCCTGGAACGACCAAGGTG	6	+	44718636-44718685		nj27g01.s1 NCI_CGAP_AA1 Homo sapiens cDNA clone IMAGE:993744 3, mRNA sequence					
Homo sapiens	Unigene	Hs.584259	ILMN_136440	HS.584259	Hs.584259		Hs.584259		70957806	DR731427			ILMN_1871136	0007320615	S	93	GACAAGTGGAGAGAGGTGACAAGAGGTGTGTTGGACAGCTCGGAGAGGAC	9	+	3868660-3868709		MGC4.2.1.4.1.F12.F.1 NIH_MGC_331 Homo sapiens cDNA clone MGC4.2.1.4.1.F12, mRNA sequence					
Homo sapiens	RefSeq	NM_198970.1	ILMN_25198	AES	NM_198970.1	NM_198970.1		166	39812026	NM_198970.1	AES	NP_945321.1	ILMN_2333107	0006180176	A	850	GCGGAGCTCGGGATTGGCTAAACTCCCATAGTATTTATGGTGGCCGCCGG	19	-	3053681-3053730	19p13.3f	Homo sapiens amino-terminal enhancer of split (AES), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8365415] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9809752] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11390640] [evidence IPI]	AES-2; ESP1; GRG5; GRG; TLE5; AES-1	AES-2; ESP1; GRG5; GRG; TLE5; AES-1
Homo sapiens	RefSeq	NM_019043.3	ILMN_19412	APBB1IP	NM_019043.3	NM_019043.3		54518	56118220	NM_019043.3	APBB1IP	NP_061916.3	ILMN_1801710	0001820722	S	2330	CATGATGAGTGTTCCAGAGGGAGAAGCATCGCTGACCCCGAGCGCAGGTT	10	+	26840683-26840732	10p12.1b	Homo sapiens amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein (APBB1IP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		PREL1; INAG1; RIAM; RARP1	RARP1; PREL1; INAG1; RIAM
Homo sapiens	RefSeq	NM_003076.3	ILMN_166198	SMARCD1	NM_003076.4	NM_003076.4		6602	133908628	NM_003076.4	SMARCD1	NP_003067.3	ILMN_1727173	0002000121	I	1508	AGACCCTCAGGGTTTCATCAATGACTGGCTTCAGTCCCAGTGCAGGGACC	12	+	48776968-48777017	12q13.13a	Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 (SMARCD1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8804307] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [pmid 12917342] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8804307] [evidence TAS]; Maintenance of transcription by remodelling of chromatin into an 'open configuration'. Once established, this regulation is mitotically stable and is maintained over many cell divisions. It is also heritable [goid 48096] [pmid 12917342] [evidence IMP]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 8804307] [evidence TAS]; Functions to provide a physical support for the assembly of a multiprotein complex [goid 32947] [pmid 12917342] [evidence IDA]	Rsc6p; BAF60A; CRACD1	Rsc6p; BAF60A; CRACD1
Homo sapiens	RefSeq	XM_001720723.1	ILMN_345041	LOC100130794	XM_001720723.1	XM_001720723.1		100130794	169211737	XM_001720723.1	LOC100130794	XP_001720775.1	ILMN_3188094	0001500121	A	46	CAATGGTGGACAATCCAGAGTGCTGAACAGCCCTACAAGATTGCTGCTCG				17q11.2b	PREDICTED: Homo sapiens similar to NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 (NADH-ubiquinone oxidoreductase 15 kDa subunit) (Complex I-15 kDa) (CI-15 kDa) (LOC100130794), mRNA.					
Homo sapiens	Unigene	Hs.541801	ILMN_105943	HS.541801	Hs.541801		Hs.541801		5361872	AI796409			ILMN_1902635	0005690189	S	136	GCCCTCATGTCATAGATTCTACTAAGTGTCAGCTCATTCCCTGAGAGATG	2	-	123138905-123138954		wj17e02.x1 NCI_CGAP_Kid12 Homo sapiens cDNA clone IMAGE:2403098 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001723079.1	ILMN_341122	LOC100133984	XM_001723079.1	XM_001723079.1		100133984	169217525	XM_001723079.1	LOC100133984	XP_001723131.1	ILMN_3240583	0004010626	S	298	TTCGATGTGGACACAGCCAACAACTATCTCATCATTTCTGAAGACCTGAG					PREDICTED: Homo sapiens similar to hCG1733035 (LOC100133984), mRNA.					
Homo sapiens	RefSeq	NM_176813.3	ILMN_20719	AGR3	NM_176813.3	NM_176813.3		155465	38455428	NM_176813.3	AGR3	NP_789783.1	ILMN_2050246	0004590594	S	461	GCTGACATAGCTGGAAGATACTCTAACAGATTGTACACATATGAGCCTCG	7	-	16900137-16900186	7p21.1b	Homo sapiens anterior gradient homolog 3 (Xenopus laevis) (AGR3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			HAG3; hAG-3; BCMP11	HAG3; hAG-3; BCMP11
Homo sapiens	RefSeq	NM_176813.3	ILMN_20719	AGR3	NM_176813.3	NM_176813.3		155465	38455428	NM_176813.3	AGR3	NP_789783.1	ILMN_1728787	0005290273	S	87	CAGCTTTGGGTCTCTGCCTCTTACTCGTCACAGTTTCTTCCAACCTTGCC	7	-	16918179-16918228	7p21.1b	Homo sapiens anterior gradient homolog 3 (Xenopus laevis) (AGR3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			HAG3; hAG-3; BCMP11	HAG3; hAG-3; BCMP11
Homo sapiens	RefSeq	NM_020426.1	ILMN_27017	LYZL6	NM_020426.1	NM_020426.1		57151	9966904	NM_020426.1	LYZL6	NP_065159.1	ILMN_1750902	0000520762	S	439	GACTGTCAAGATCTGCTGAATCCCAACCTTCTTGCAGGCATCCACTGCGC	17	-	34263797-34263837:34264762-34264770	17q12b	Homo sapiens lysozyme-like 6 (LYZL6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	PRO1485; LYC1; 1700023H08Rik; TKAL754	PRO1485; LYC1; 1700023H08Rik; TKAL754
Homo sapiens	RefSeq	NM_005964.1	ILMN_23305	MYH10	NM_005964.1	NM_005964.1		4628	41406063	NM_005964.1	MYH10	NP_005955.1	ILMN_1815154	0001770685	S	7414	TTCCCCCTTTATGAACTGTACTGGCTGTTGACCACCAGACACCTGACCGC	17	-	8380283-8380332	17p13.1c	Homo sapiens myosin, heavy chain 10, non-muscle (MYH10), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IEA]; Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [pmid 7699007] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7699007] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [pmid 7699007] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [pmid 7499478] [evidence NAS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 11029059] [evidence IDA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [pmid 11029059] [evidence IDA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [pmid 7699007] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IEA]	A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [evidence IEA]; A cell cycle process that results in the division of the cytoplasm of a cell after mitosis, resulting in the separation of the original cell into two daughter cells [goid 281] [pmid 15774463] [evidence IDA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The formation of a cell surface protrusion, such as a lamellipodium or filopodium, at the leading edge of a migrating cell [goid 6930] [evidence IEA]; The directed movement of the nucleus [goid 7097] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The process whose specific outcome is the progression of the fourth ventricle over time, from its formation to the mature structure. The fourth ventricle is an irregularly shaped cavity in the rhombencephalon, between the medulla oblongata, the pons, and the isthmus in front, and the cerebellum behind. It is continuous with the central canal of the cord below and with the cerebral aqueduct above, and through its lateral and median apertures it communicates with the subarachnoid space [goid 21592] [evidence IEA]; The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle [goid 21670] [evidence IEA]; The process whose specific outcome is the progression of the third ventricle over time, from its formation to the mature structure. The third ventricle is the narrow cleft inferior to the corpus callosum, within the diencephalon, between the paired thalami. Its floor is formed by the hypothalamus, its anterior wall by the lamina terminalis, and its roof by ependyma, and it communicates with the fourth ventricle by the cerebral aqueduct, and with the lateral ventricles by the interventricular foramina [goid 21678] [evidence IEA]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [pmid 15845534] [evidence IDA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence IEA]; The process whose specific outcome is the progression of a ventricular cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55015] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IEA]	Catalysis of movement along a microfilament, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 146] [pmid 15845534] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 7782316] [evidence NAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, requiring the presence of an actin filament to accelerate release of ADP and phosphate [goid 30898] [pmid 15845534] [evidence IDA]; Interacting selectively with ADP, adenosine 5'-diphosphate [goid 43531] [pmid 15845534] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 15845534] [evidence IDA]	NMMHCB; MGC134914; MGC134913	MGC134914; MGC134913; NMMHCB
Homo sapiens	RefSeq	NM_012075.1	ILMN_30165	C16ORF35	NM_012075.1	NM_012075.1		8131	6912301	NM_012075.1	C16orf35	NP_036207.1	ILMN_1733581	0004150563	S	2883	TTGGAAAGGCCCCTTGGATTCCTGGCTGGGGACAATGATGACCTGGACCC	16	-	74541-74590	16p13.3f	Homo sapiens chromosome 16 open reading frame 35 (C16orf35), mRNA.				CGTHBA	CGTHBA
Homo sapiens	RefSeq	NM_025249.1	ILMN_11229	KIAA1683	NM_025249.1	NM_025249.1		80726	54606861	NM_025249.1	KIAA1683	NP_079525.1	ILMN_2158003	0003850754	S	3690	TGCAGTGGGGACTTCGTGGGAGGCACTCATGGCTCTCTGGGTCTAATGAA	19	-	18228925-18228974	19p13.11c	Homo sapiens KIAA1683 (KIAA1683), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]			MGC131731	MGC131731
Homo sapiens	RefSeq	NM_153234.3	ILMN_22811	LIX1	NM_153234.3	NM_153234.3		167410	34222285	NM_153234.3	LIX1	NP_694966.2	ILMN_1691848	0006650070	S	3540	ACACAGTTCCAGAGTATGTGGACCCCCCAAAGTCCAGAGATTGCCCTAGG	5	-	96453626-96453675	5q15e	Homo sapiens Lix1 homolog (mouse) (LIX1), mRNA.			The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	C5orf11; FLJ25534	C5orf11; FLJ25534
Homo sapiens	RefSeq	XM_942185.1	ILMN_34078	LOC652634	XM_942185.1	XM_942185.1		652634	89063394	XM_942185.1	LOC652634	XP_947278.1	ILMN_1805342	0006100333	S	764	CAGGAGTGACCACAAAGCCTGACAACACTTTGCCACCCAGCAAGAACTGG					PREDICTED: Homo sapiens similar to fem-1 homolog a (LOC652634), mRNA.					
Homo sapiens	RefSeq	NR_000035.2	ILMN_6845	CASP12	NR_000035.2	NR_000035.2		120329	109637802	NR_000035.2	CASP12		ILMN_2132119	0002640634	S	908	CAAGCCTGCCGAGGCAATGGTGCTGGGATTGTTTGGTTCACCACTGACAG	11	-	104761216-104761250:104761897-104761911	11q22.3a	Homo sapiens caspase 12 (gene/pseudogene) (CASP12), non-coding RNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process of apoptosis in cells infected with a virus [goid 6926] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CASP12P1	CASP12P1
Homo sapiens	RefSeq	NM_014375.2	ILMN_21288	FETUB	NM_014375.2	NM_014375.2		26998	58331239	NM_014375.2	FETUB	NP_055190.2	ILMN_1685483	0001440377	S	1303	CGATGGGGACGATGGACAGAGACAGAGCGTGCACACGTAGAGTGGCTAGT	3	+	186370473-186370522	3q27.3a	Homo sapiens fetuin B (FETUB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ];  [goid 4869] [evidence IEA]	16G2; Gugu; IRL685	16G2; Gugu; IRL685
Homo sapiens	RefSeq	NM_014501.1	ILMN_180228	LOC731049	XM_001129232.1	XM_001129232.1		731049	113430895	XM_001129232.1	LOC731049	XP_001129232.1	ILMN_1808591	0004610608	S	851	CGGCGGCTGTAGTGGGCTCTCTTCCTCCTTCCACCGTGACCCCAACCTCT					PREDICTED: Homo sapiens similar to Ubiquitin-conjugating enzyme E2S (Ubiquitin-conjugating enzyme E2-24 kDa) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (E2-EPF5) (LOC731049), mRNA.					E2-EPF
Homo sapiens	RefSeq	NM_181776.1	ILMN_28935	SLC36A2	NM_181776.1	NM_181776.1		153201	32401452	NM_181776.1	SLC36A2	NP_861441.1	ILMN_1793182	0006180711	S	3225	CCCAGTTGAGCCCTGTCCGCAGATCAACCAGCCTACCAACTTCCAGACAC	5	-	150674846-150674895	5q33.1d	Homo sapiens solute carrier family 36 (proton/amino acid symporter), member 2 (SLC36A2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of L-alanine, the levorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells [goid 15808] [evidence IEA]; The directed movement of glycine, aminoethanoic acid, into, out of, within or between cells [goid 15816] [evidence IEA]; The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of, within or between cells [goid 15824] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + H+(out) = amino acid(in) + H+(in) [goid 5280] [evidence IEA]; Catalysis of the transfer of L-alanine from one side of a membrane to the other. L-alanine, the levorotatory isomer of 2-aminopropanoic acid [goid 15180] [evidence IEA]; Catalysis of the transfer of glycine from one side of a membrane to the other. Glycine is aminoethanoic acid [goid 15187] [evidence IEA]; Catalysis of the transfer of L-proline from one side of a membrane to the other. L-proline is pyrrolidine-2-carboxylic acid [goid 15193] [evidence IEA]	PAT2; TRAMD1; MGC119660; MGC119658; FLJ16051	PAT2; TRAMD1; MGC119658; MGC119660; FLJ16051
Homo sapiens	RefSeq	NM_006510.3	ILMN_25859	TRIM27	NM_006510.4	NM_006510.4		5987	115387097	NM_006510.4	TRIM27	NP_006501.1	ILMN_1655482	0001990441	I	1600	GGAAAGAATATTGGGCTCTTACCTCCCCAATGACTGCCCTACCCCTGCGG	6	-	28980077-28980126	6p22.1a	Homo sapiens tripartite motif-containing 27 (TRIM27), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 3078962] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10976108] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3078962] [evidence TAS]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 10976108] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10976108] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 3380101] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2734021] [evidence TAS]; Any epigenetic process that stops, prevents or reduces the rate of gene expression [goid 45814] [pmid 10976108] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 3078962] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15837424] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9570750] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [pmid 3380101] [evidence TAS]	RFP; RNF76	RNF76; TRIM27
Homo sapiens	RefSeq	XM_936387.1	ILMN_139193	SSX4	XM_936387.1	XM_936387.1		6759	89065693	XM_936387.1	SSX4	XP_941480.1	ILMN_1717025	0006860037	I	29	GGGGAGGGGAGACTCTGATTTTCCCGCCGAAAGCGTCCCCTTGGATTGGC				Xp11.23d	PREDICTED: Homo sapiens synovial sarcoma, X breakpoint 4, transcript variant 3 (SSX4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	NM_004080.1	ILMN_8815	DGKB	NM_004080.1	NM_004080.1		1607	22027631	NM_004080.1	DGKB	NP_004071.1	ILMN_1810335	0004540192	I	3858	GGAAAACGAGTGCCTGAACTGCATGATTTATTAGTTTCTCTCCACTCTGC	7	-	14153788-14153837	7p21.2a	Homo sapiens diacylglycerol kinase, beta 90kDa (DGKB), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0718; DGK-BETA; DAGK2; DGK	KIAA0718; DGK-BETA; DAGK2; DGK
Homo sapiens	RefSeq	XM_942110.1	ILMN_36019	LOC652589	XM_942110.1	XM_942110.1		652589	89071827	XM_942110.1	LOC652589	XP_947203.1	ILMN_1774477	0002650392	S	543	AGACAGGATGCTCAGCGCCCTGCAGCTCTTTGCTGTGTCCCTGGGGGCCT					PREDICTED: Homo sapiens similar to solute carrier family 34 (sodium phosphate), member 3 (LOC652589), mRNA.					
Homo sapiens	RefSeq	XM_497527.2	ILMN_35826	LOC441782	XM_497527.2	XM_497527.2		441782	89042416	XM_497527.2	LOC441782	XP_497527.2	ILMN_1810803	0001850750	S	902	GGGGTCAAGCCCAGGTGAAATGTGGATTGGAAAAGTGCTTCCCTTGCCCC					PREDICTED: Homo sapiens similar to spectrin domain with coiled-coils 1 (LOC441782), mRNA.					
Homo sapiens	RefSeq	XM_001720731.1	ILMN_347179	LOC729459	XM_001720731.1	XM_001720731.1		729459	169172885	XM_001720731.1	LOC729459	XP_001720783.1	ILMN_3245327	0004230315	S	453	GCCTCAGCTACTGTTAGGATCAGGGGGAGAACCATGGTGTCAGACATCCG	8	+	7920457-7920489:7920490-7920506	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC729459 (LOC729459), mRNA.					
Homo sapiens	RefSeq	NM_015094.1	ILMN_165154	HIC2	NM_015094.2	NM_015094.2		23119	139394598	NM_015094.2	HIC2	NP_055909.2	ILMN_1652762	0005820672	S	6578	CTCCTGTACTGGCCACCGCCGCTGTCACTTGTCACATTGAGTTCATGTCC	22	+	20135532-20135581	22q11.21f	Homo sapiens hypermethylated in cancer 2 (HIC2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11554746] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11554746] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11554746] [evidence NAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 12052894] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1020; ZBTB30; HRG22	KIAA1020; ZBTB30; HRG22
Homo sapiens	RefSeq	NM_000583.2	ILMN_21791	GC	NM_000583.2	NM_000583.2		2638	32483409	NM_000583.2	GC	NP_000574.2	ILMN_1736162	0004780278	S	1598	ACTTTGACCAGAGTTGGAGCCACCCAGGGGAATGATCTCTGATGACCTAA	4	-	72826407-72826451:72830732-72830736	4q13.3b-q13.3c	Homo sapiens group-specific component (vitamin D binding protein) (GC), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways involving vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 42359] [evidence IEA]; The chemical reactions and pathways involving vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 42359] [evidence IEA]; The directed movement of vitamins into, out of, within or between cells. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body [goid 51180] [pmid 1696927] [evidence TAS]	Interacting selectively with vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 5499] [evidence IEA]; Enables the directed movement of vitamins into, out of, within or between cells. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body [goid 51183] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 12119014] [evidence IPI]; Interacting selectively with vitamin D, a fat soluble vitamin that contributes to the maintenance of normal levels of calcium and phosphorus in the human bloodstream. Vitamin D is also known as calciferol and five different forms are known, including ergocalciferol and cholecalciferol [goid 5499] [pmid 1696927] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12119014] [evidence IPI]; Enables the directed movement of vitamins into, out of, within or between cells. A vitamin is one of a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body [goid 51183] [evidence IEA]	VDBP; DBP/GC; DBP; VDBG	VDBP; DBP/GC; DBP; VDBG
Homo sapiens	RefSeq	XM_001127849.1	ILMN_178487	LOC727997	XM_001127849.1	XM_001127849.1		727997	113416100	XM_001127849.1	LOC727997	XP_001127849.1	ILMN_3274532	0003890433	M	105	TCATGAAGCTACCAAAGGCTTAGACAAGCACCAAGCCCACCTTTGTGTGC				4q13.1c	PREDICTED: Homo sapiens similar to 40S ribosomal protein S12 (LOC727997), mRNA.					
Homo sapiens	RefSeq	XM_926105.1	ILMN_32281	LOC649632	XM_938700.2	XM_938700.2		649632	113428948	XM_938700.2	LOC649632	XP_943793.2	ILMN_1659389	0007150468	S	444	ATTGCCAGAAGAATTTCATGATTTTGACACCCAAAATATGAATGCTATTG					PREDICTED: Homo sapiens similar to Double-strand-break repair protein rad21 homolog (Pokeweed agglutinin-binding protein 29) (PW29) (SCC1 homolog) (LOC649632), mRNA.					
Homo sapiens	RefSeq	XR_039068.1	ILMN_336100	LOC100131672	XR_039068.1	XR_039068.1		100131672	169179116	XR_039068.1	LOC100131672		ILMN_3200539	0003930370	A	321	GAGCACATTAAGCACTCTGAGCCGAGATAGCTTCCTGAAATGTGTGAAGG				9q31.3a	PREDICTED: Homo sapiens misc_RNA (LOC100131672), miscRNA.					
Homo sapiens	RefSeq	NM_207426.1	ILMN_5893	FOXI2	NM_207426.1	NM_207426.1		399823	46409477	NM_207426.1	FOXI2	NP_997309.1	ILMN_1808388	0002450437	S	2543	GCTGCCCTCCACAAGCAGGTGAGCAGAGTGCCAGTTGTGTTGAAGGTGAT	10	+	129429219-129429268	10q26.2c	Homo sapiens forkhead box I2 (FOXI2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FOXI2; FLJ46831	FOXI2; FLJ46831
Homo sapiens	RefSeq	NM_022644.2	ILMN_28739	CSH1	NM_001317.3	NM_001317.3		1442	20819954	NM_001317.3	CSH1	NP_001308.1	ILMN_1693617	0004920278	A	210	TTATCCAGGCTTTTTGACCACGCTATGCTCCAAGCCCATCGCGCGCACCA	17	-	61973462-61973511	17q23.3b	Homo sapiens chorionic somatomammotropin hormone 1 (placental lactogen) (CSH1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 593368] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1378436] [evidence NAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 1378436] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	CSMT; CSA; PL	CSB; hCS-B; CS-2
Homo sapiens	RefSeq	NM_001317.3	ILMN_28739	CSH1	NM_001317.3	NM_001317.3		1442	20819954	NM_001317.3	CSH1	NP_001308.1	ILMN_2363475	0005420224	A	595	GGACTGGGCAGATCCTCAAGCAGACCTACAGCAAGTTTGACACAAACTCG	17	-	61972507-61972556	17q23.3b	Homo sapiens chorionic somatomammotropin hormone 1 (placental lactogen) (CSH1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 593368] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1378436] [evidence NAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 1378436] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	CSMT; CSA; PL	CSMT; CSA; PL
Homo sapiens	RefSeq	NM_174931.1	ILMN_28381	CCDC75	NM_174931.1	NM_174931.1		253635	28395050	NM_174931.1	CCDC75	NP_777591.1	ILMN_1728085	0002070270	S	831	CGTGAGGGGTTTAAGGACACCAACAGGTAACTTCTTATTCCCCTCTTCAC	2	+	37177152-37177201	2p22.2b	Homo sapiens coiled-coil domain containing 75 (CCDC75), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ38348; GPATCH11	FLJ38348; GPATCH11
Homo sapiens	RefSeq	NM_172347.1	ILMN_13888	KCNG4	NM_172347.1	NM_172347.1		93107	27436995	NM_172347.1	KCNG4	NP_758857.1	ILMN_1768511	0007320474	I	1544	CTCCGCCACCTCCAAAACACCGGTCCAGCCAGTGAATGTGAACTCCTGGA	16	-	84255910-84255959	16q24.1a	Homo sapiens potassium voltage-gated channel, subfamily G, member 4 (KCNG4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC4558; MGC129609; KV6.4; KV6.3	MGC4558; MGC129609; KV6.4; KV6.3
Homo sapiens	RefSeq	NM_001009820.1	ILMN_22033	SNRP70	NM_001009820.1	NM_001009820.1		6625	57634538	NM_001009820.1	SNRP70	NP_001009820.1	ILMN_1683049	0004390274	I	925	GCTGGCTTGCAGCTGATGCTTACGCTCCCCTTACAACACCTCAGTGTATG	19	+	54297193-54297208:54297209-54297242	19q13.33a	Homo sapiens small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen) (SNRP70), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9531537] [evidence IDA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 9531537] [evidence IDA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 43484] [pmid 2467746] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2467746] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14561889] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9447963] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14561889] [evidence IPI]	U1AP; RPU1; U1RNP; RNPU1Z; U170K	U1AP; RPU1; U1RNP; RNPU1Z; U170K
Homo sapiens	RefSeq	NM_001008539.1	ILMN_10012	SLC7A2	NM_001008539.2	NM_001008539.2		6542	134304857	NM_001008539.2	SLC7A2	NP_001008539.2	ILMN_1711451	0001260142	I	1118	GCTATGGCGGAGGATGGGTTGCTTTTCAAATGTCTAGCTCAAATCAATTC	8	+	17456401-17456450	8p22b	Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (SLC7A2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8954799] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8954799] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 8954799] [evidence TAS]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8954799] [evidence TAS]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IEA]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IEA]; The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of, within or between cells [goid 15822] [evidence IEA]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IEA]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IEA]	Catalysis of the transfer of L-ornithine from one side of a membrane to the other. L-ornithine is 2,5-diaminopentanoic acid [goid 64] [evidence IEA]; Catalysis of the transfer of arginine from one side of a membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 5289] [evidence IEA]; Catalysis of the transfer of basic amino acids from one side of a membrane to the other. Acidic amino acids have a pH above 7 [goid 15174] [pmid 8954799] [evidence TAS]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IEA]	CAT-2; HCAT2; ATRC2	CAT-2; HCAT2; ATRC2
Homo sapiens	RefSeq	NM_003046.2	ILMN_10012	SLC7A2	NM_001008539.2	NM_001008539.2		6542	134304857	NM_001008539.2	SLC7A2	NP_001008539.2	ILMN_1781400	0003710154	A	6998	GTGCCACGTGTCTCACCAAGACCCAGTTGGGAAAGAGCGTCATATTGCCA	8	+	17471928-17471977	8p22b	Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 (SLC7A2), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8954799] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8954799] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The synthesis or release of nitric oxide following a stimulus during an acute inflammatory response, resulting in an increase in its intracellular or extracellular levels [goid 2537] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 8954799] [evidence TAS]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8954799] [evidence TAS]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IEA]; The directed movement of arginine, 2-amino-5-guanidinopentanoic acid, into, out of, within or between cells [goid 15809] [evidence IEA]; The directed movement of lysine, 2,6-diaminohexanoic acid, into, out of, within or between cells [goid 15819] [evidence IEA]; The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of, within or between cells [goid 15822] [evidence IEA]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IEA]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IEA]	Catalysis of the transfer of L-ornithine from one side of a membrane to the other. L-ornithine is 2,5-diaminopentanoic acid [goid 64] [evidence IEA]; Catalysis of the transfer of arginine from one side of a membrane to the other. In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 5289] [evidence IEA]; Catalysis of the transfer of basic amino acids from one side of a membrane to the other. Acidic amino acids have a pH above 7 [goid 15174] [pmid 8954799] [evidence TAS]; Catalysis of the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid [goid 15189] [evidence IEA]	CAT-2; HCAT2; ATRC2	CAT-2; HCAT2; ATRC2
Homo sapiens	RefSeq	XM_930317.1	ILMN_44058	LOC653601	XM_930317.1	XM_930317.1		653601	88965612	XM_930317.1	LOC653601	XP_935410.1	ILMN_1667867	0004570176	S	263	CCCCTCCAGGCTTTGCCAGGGATGCCTTTTGTGCTCCTGTAGCATCTGTA	3	+	139494570-139494619		PREDICTED: Homo sapiens similar to armadillo repeat containing 8 (LOC653601), mRNA.					
Homo sapiens	Unigene	Hs.561418	ILMN_114856	HS.561418	Hs.561418		Hs.561418		6697961	AW291325			ILMN_1907537	0001300170	S	31	GGGGTGGTGTATTCTGGTGTCTTACAGTCGCATTTTGAGGGAGTGTGTCC	5	-	42992811-42992860		UI-H-BI2-agg-d-11-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2724164 3, mRNA sequence					
Homo sapiens	RefSeq	NM_198082.1	ILMN_26012	CCDC57	NM_198082.1	NM_198082.1		284001	37620217	NM_198082.1	CCDC57	NP_932348.1	ILMN_1687437	0003420768	S	2644	AGAAACCGTCCTTGCCTGTGCTCTGCCAGCGTTGCTGTCTGTATGCCCTG	17	-	77708815-77708864	17q25.3g	Homo sapiens coiled-coil domain containing 57 (CCDC57), mRNA.				MGC102869; FLJ00130	MGC102869; FLJ00130
Homo sapiens	RefSeq	NM_152473.1	ILMN_4844	FLJ32214	NM_152473.1	NM_152473.1		147664	22748988	NM_152473.1	FLJ32214	NP_689686.1	ILMN_1780637	0000670497	S	1839	CCCAGACCAGTTCCCAACACATGCTTACTAGTAACGCCCCTGCATGACCC	19	+	58211270-58211319	19q13.41a	Homo sapiens hypothetical protein FLJ32214 (FLJ32214), mRNA.	The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Homo sapiens	RefSeq	NM_001005493.1	ILMN_10806	OR6C6	NM_001005493.1	NM_001005493.1		283365	53933269	NM_001005493.1	OR6C6	NP_001005493.1	ILMN_1711517	0001300201	S	466	CCCCCATTGGTCATGGGACTCAAGCTGGATTTTTGTGCTTCCAAAACTAT	12	-	55688501-55688550	12q13.2b	Homo sapiens olfactory receptor, family 6, subfamily C, member 6 (OR6C6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	XM_935562.1	ILMN_43743	LOC641804	XM_935562.1	XM_935562.1		641804	89027338	XM_935562.1	LOC641804	XP_940655.1	ILMN_1787717	0001240053	S	452	GCATCTCGGAGCCCGTCAAGGTGCCATACTCCAAGTTTCTGATGCACCCG					PREDICTED: Homo sapiens similar to GTF2I repeat domain containing 1 isoform 2 (LOC641804), mRNA.					
Homo sapiens	RefSeq	NM_145018.2	ILMN_11038	C11ORF82	NM_145018.2	NM_145018.2		220042	25072198	NM_145018.2	C11orf82	NP_659455.2	ILMN_1790100	0002570019	S	3153	GGCCCACCTTCAGTGTGTGAAACTCGAAGTGCTTGGTCACCTGAATTGTT	11	+	82322969-82323018	11q14.1d	Homo sapiens chromosome 11 open reading frame 82 (C11orf82), mRNA.				FLJ38838; FLJ13936; FLJ25416	FLJ38838; FLJ25416; FLJ13936
Homo sapiens	RefSeq	NM_207505.1	ILMN_21467	FLJ45248	NM_207505.1	NM_207505.1		401472	46409637	NM_207505.1	FLJ45248	NP_997388.1	ILMN_1807093	0002630202	S	2253	CAGAGTCCTACAAAAGCCGCGCCTAATCCTGGGGGTGTGGGCTTTAAACC	8	+	103890858-103890907	8q22.3c	Homo sapiens FLJ45248 protein (FLJ45248), mRNA.					
Homo sapiens	RefSeq	XM_938140.1	ILMN_40779	LOC649057	XM_938140.1	XM_938140.1		649057	89061471	XM_938140.1	LOC649057	XP_943233.1	ILMN_1709000	0006960364	S	102	TCCTCAATCTGGTCTGCGTTTTGCGGCTCCTGGCATCCGGAGACGTTCCA					PREDICTED: Homo sapiens hypothetical protein LOC649057 (LOC649057), mRNA.					
Homo sapiens	RefSeq	NM_198392.1	ILMN_23636	TCF21	NM_198392.1	NM_198392.1		6943	38202238	NM_198392.1	TCF21	NP_938206.1	ILMN_1719351	0000730373	I	2920	TGAAGTGGGGCCCCAGGTGATGTCATTGCTGCTGGTCCCAGGACCACATT	6	+	134258098-134258147	6q23.2d	Homo sapiens transcription factor 21 (TCF21), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Branching of the ureteric bud [goid 1658] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [pmid 9507058] [evidence TAS]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	POD1	POD1
Homo sapiens	RefSeq	NM_003206.2	ILMN_23636	TCF21	NM_198392.1	NM_198392.1		6943	38202238	NM_198392.1	TCF21	NP_938206.1	ILMN_1728570	0007100139	A	739	CGAGAGTGACCTGAAAGAAGTGGTGACCGCGAGCCGCTTATGTGGAACCA	6	+	134254573-134254622	6q23.2d	Homo sapiens transcription factor 21 (TCF21), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Branching of the ureteric bud [goid 1658] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [pmid 9507058] [evidence TAS]; The establishment of the sex of an organism by physical differentiation [goid 7548] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	POD1	POD1
Homo sapiens	RefSeq	NR_024246.1	ILMN_370191	LOC144742	NR_024246.1	NR_024246.1		144742	209915549	NR_024246.1	LOC144742		ILMN_3237296	0003060731	S	2139	GTCCCAGATGTGTGAGAAAGCCCCACCAAGATTGGCAGAGCCACCTAGCC	12	-	119721732-119721781	12q24.23b	Homo sapiens hypothetical LOC144742 (LOC144742), non-coding RNA.					
Homo sapiens	RefSeq	XM_065445.4	ILMN_40177	LOC129870	XM_065445.4	XM_065445.4		129870	88953343	XM_065445.4	LOC129870	XP_065445.4	ILMN_1661559	0007100735	S	170	CCAGAATTGGTGGGTTCTCGGTCTCGCTGATTTCAAGAACGAAGCCACGG	2	-	95495646-95495695	2q11.1c	PREDICTED: Homo sapiens similar to Nucleolar transcription factor 1 (Upstream binding factor 1) (UBF-1) (Autoantigen NOR-90) (LOC129870), mRNA.					
Homo sapiens	RefSeq	NM_005058.2	ILMN_169446	RBMY1A1	NM_005058.2	NM_005058.2		5940	56682954	NM_005058.2	RBMY1A1	NP_005049.1	ILMN_1690753	0001740129	I	449	TCTGCAAGAGGAAGCCGTGGAGGAACAAGAGGGTGGCTTCCCTCACATGA	Y	+	22111989-22112038	Yq11.223a-q11.223b	Homo sapiens RNA binding motif protein, Y-linked, family 1, member A1 (RBMY1A1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9598316] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9598316] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8269511] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8269511] [evidence TAS]	RBM1; RBMY; YRRM2; RBM2; YRRM1	RBM1; RBMY; YRRM2; RBM2; YRRM1
Homo sapiens	Unigene	Hs.546105	ILMN_109150	HS.546105	Hs.546105		Hs.546105		5100912	AI738931			ILMN_1863656	0002340669	S	251	GACCTCCTTTAAATCCATAAATTCAGCCGGGTGAGGTGGCTCATGCCCGG					wi12b07.x1 NCI_CGAP_Co16 Homo sapiens cDNA clone IMAGE:2390005 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038786.1	ILMN_342398	LOC646572	XR_038786.1	XR_038786.1		646572	169161765	XR_038786.1	LOC646572		ILMN_3284521	0004920491	M	1192	GAGTAGGGTGAGGAGAGAGCCACAAAACATAGATCTGGAGGCAGCAGTGC				1p36.11a	PREDICTED: Homo sapiens misc_RNA (LOC646572), miscRNA.					
Homo sapiens	RefSeq	XM_945185.1	ILMN_36276	LOC440864	XM_945185.1	XM_945185.1		440864	88955069	XM_945185.1	LOC440864	XP_950278.1	ILMN_1731085	0001690368	A	1883	AGCCCATCTGCAAGGCAGGAAGACGGCCTTCAACAGCAACGAAATCAGTC					PREDICTED: Homo sapiens hypothetical gene supported by BC040724 (LOC440864), mRNA.					
Homo sapiens	RefSeq	NM_004925.3	ILMN_22744	AQP3	NM_004925.3	NM_004925.3		360	22165421	NM_004925.3	AQP3	NP_004916.1	ILMN_1651574	0001050040	S	1485	GCTTCTACAGGCTTTTGGGAAGTAGGGTGGATGTGGGTAGGGCTGGGAGG	9	-	33441447-33441496	9p13.3e	Homo sapiens aquaporin 3 (Gill blood group) (AQP3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	Any process that activates or increases the frequency, rate, or extent of an immune system process [goid 2684] [pmid 17943189] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7543093] [evidence NAS]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [pmid 17943189] [evidence TAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 7543093] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 17943189] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus [goid 33280] [pmid 17943189] [evidence TAS]; Any process that modulates the frequency, rate or extent of keratinocyte differentiation [goid 45616] [pmid 17943189] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [pmid 17943189] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 7543093] [evidence NAS]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [pmid 17943189] [evidence TAS]; Catalysis of facilitated diffusion of glycerol (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15254] [pmid 17943189] [evidence IDA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	GIL	GIL
Homo sapiens	RefSeq	XM_001722111.1	ILMN_336990	LOC100132585	XM_001722111.1	XM_001722111.1		100132585	169170098	XM_001722111.1	LOC100132585	XP_001722163.1	ILMN_3237404	0001240669	S	1	TTTGGGAGGCTGAGGTGGACAGATCATGAGGTCAGGAGTTCGAGACCAGC	7	-	74002136-74002185	7q11.23c	PREDICTED: Homo sapiens hypothetical protein LOC100132585 (LOC100132585), mRNA.					
Homo sapiens	RefSeq	XM_001717972.1	ILMN_342085	LOC100133998	XM_001717972.1	XM_001717972.1		100133998	169211698	XM_001717972.1	LOC100133998	XP_001718024.2	ILMN_3241304	0000830414	S	1384	CCAGGTCATTTAGTGGCAAGTTCAGAGGCCAGGAGCAACCCCATCAGCCC					PREDICTED: Homo sapiens similar to CMT1A duplicated region transcript 1 (LOC100133998), mRNA.					
Homo sapiens	RefSeq	XM_931150.1	ILMN_43200	LOC642558	XM_931150.1	XM_931150.1		642558	88944252	XM_931150.1	LOC642558	XP_936243.1	ILMN_1810567	0007320019	I	516	GCCCAGCTCTGCGCAAGGGCACACACCTCCTTCCTTTACACACTCAATAC	1	-	50639-50688		PREDICTED: Homo sapiens similar to FUS interacting protein (serine-arginine rich) 1, transcript variant 2 (LOC642558), mRNA.					
Homo sapiens	RefSeq	NM_002306.1	ILMN_14333	LGALS3	NM_002306.1	NM_002306.1		3958	4504982	NM_002306.1	LGALS3	NP_002297.1	ILMN_1803788	0005420377	S	741	CCTCACCAGTGCTTCATATACCATGATATAATCTGAAAGGGGCAGATTAA	14	+	54681712-54681742:54681743-54681761	14q22.3a	Homo sapiens lectin, galactoside-binding, soluble, 3 (galectin 3) (LGALS3), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14961764] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14961764] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9162064] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 9162064] [evidence TAS]; Interacting selectively with an immunoglobulin of the IgE isotype [goid 19863] [evidence IEA]	GAL3; MAC2; LGALS2; CBP35; GALBP	GAL3; MAC2; LGALS2; CBP35; GALBP
Homo sapiens	RefSeq	NM_001008537.1	ILMN_6586	KIAA2022	NM_001008537.1	NM_001008537.1		340533	56711285	NM_001008537.1	KIAA2022	NP_001008537.1	ILMN_1788400	0000990326	S	10323	TGCTGTGAAGTGTCTGTATGTGAGAGTTTTCCTTTTTCTGCACCACTAGG	X	-	73870457-73870506	Xq13.3a	Homo sapiens KIAA2022 (KIAA2022), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]	RP11-130N24.1; bA130N24.1	RP11-130N24.1; bA130N24.1
Homo sapiens	RefSeq	XM_942463.1	ILMN_170808	LOC729751	XM_001131201.1	XM_001131201.1		729751	113427004	XM_001131201.1	LOC729751	XP_001131201.1	ILMN_1667207	0004760195	I	1579	AGTTTCCCTCGCAGTCGATTTGGACCAAGACTACCCACAATCTCCCCACC	17	-	60205918-60205967	17q24.1a	PREDICTED: Homo sapiens similar to similar to pleckstrin homology domain containing, family M (with RUN domain) member 1; adapter protein 162 (LOC729751), mRNA.					
Homo sapiens	RefSeq	XM_935203.1	ILMN_170808	LOC729751	XM_001131201.1	XM_001131201.1		729751	113427004	XM_001131201.1	LOC729751	XP_001131201.1	ILMN_1767178	0005720528	I	505	GGTGGGCGTCCCTGCGCTGGGAATCCCTCTCGGAGTTTTTCCAGGCCCGG	17	-	60207511-60207560	17q24.1a	PREDICTED: Homo sapiens similar to similar to pleckstrin homology domain containing, family M (with RUN domain) member 1; adapter protein 162 (LOC729751), mRNA.					
Homo sapiens	Unigene	Hs.574671	ILMN_126852	HS.574671	Hs.574671		Hs.574671		9866586	AV645572			ILMN_1835631	0002370528	S	241	GGTTCACACATCTTGTCTGTGGTGGAGCTAGGACTTGAACTCAGGCAGCC	2	-	127853827-127853876		AV645572 GLC Homo sapiens cDNA clone GLCABG03 3, mRNA sequence					
Homo sapiens	Unigene	Hs.121525	ILMN_75769	HS.121525	Hs.121525		Hs.121525		27831083	BX101252			ILMN_1882112	0000670037	S	244	GCGGCACAGGACATGGAAGTATGGAGTGGACAGGTTACCATTTGTACGCG	14	-	70443338-70443387		BX101252 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGp998I115625, mRNA sequence					
Homo sapiens	RefSeq	NM_002519.1	ILMN_2928	NPAT	NM_002519.1	NM_002519.1		4863	4505430	NM_002519.1	NPAT	NP_002510.1	ILMN_2120965	0002940754	S	3806	AGGCTTGCTGATAGTAGTGATTTACCTGTGCCCCGGACACCTGGCTCAGG	11	-	107537201-107537250	11q22.3c	Homo sapiens nuclear protein, ataxia-telangiectasia locus (NPAT), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		E14	E14
Homo sapiens	RefSeq	NM_002408.3	ILMN_163431	MGAT2	NM_002408.3	NM_002408.3		4247	62750355	NM_002408.3	MGAT2	NP_002399.1	ILMN_2342240	0000870400	A	2260	CCCAGTTTCACTCTCTTGACACACTTATTAGGAAGGGATTGCTTCACTGG	14	+	49159498-49159547	14q22.1a	Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7797505] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R [goid 8455] [pmid 7635144] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	GNT-II; CDGS2; GLCNACTII; GNT2	GNT-II; CDGS2; GLCNACTII; GNT2
Homo sapiens	RefSeq	XM_941864.1	ILMN_31838	LOC652424	XM_941864.1	XM_941864.1		652424	89071462	XM_941864.1	LOC652424	XP_946957.1	ILMN_1754198	0002490129	S	3	GCCTCACAGGGGACAGGGCAGCATTTCCTTCAGCAGTGGAGCCTATTCCT					PREDICTED: Homo sapiens similar to similar to KIAA0592 protein (LOC652424), mRNA.					
Homo sapiens	RefSeq	NR_003237.1	ILMN_162083	SNORD113-9	NR_003237.1	NR_003237.1		767569	115432117	NR_003237.1	SNORD113-9		ILMN_3309854	0006250161	S	12	GAGTACCCTGGGGTGTCTGAATCTTGGATTTTGATTAAACCCTATAACTC	14	+	100481750-100481799	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 113-9 (SNORD113-9), small nucleolar RNA.				14q(I-9)	14q(I-9)
Homo sapiens	RefSeq	XR_000522.1	ILMN_32762	C1ORF132	XR_000522.1	XR_000522.1		388732	88943714	XR_000522.1	C1orf132		ILMN_1747531	0004050246	A	314	GCTGATCCTTAGCCTGGGGTCATTTTCAGGGAGGGCTGGACAGAGAAGGC	1	-	206058966-206059015		PREDICTED: Homo sapiens chromosome 1 open reading frame 132 (C1orf132), misc RNA.					
Homo sapiens	RefSeq	XM_929422.1	ILMN_183657	LOC646498	NM_001080528.1	NM_001080528.1		646498	122937487	NM_001080528.1	LOC646498	NP_001073997.1	ILMN_1723465	0004150634	S	1	ATGCCGACCAGTTCTTGCCTCTCCCAGAACCCAAAAGCATCATCCCAGCC	3	-	49227371-49227420	3p21.31d	Homo sapiens hypothetical LOC646498 (LOC646498), mRNA.					
Homo sapiens	RefSeq	XM_931851.1	ILMN_36185	LOC643842	XM_931851.1	XM_931851.1		643842	89035783	XM_931851.1	LOC643842	XP_936944.1	ILMN_1793351	0006060575	S	291	AGAGCTAAATCCCGCGCGGCTCCCCGGCTTTCCTGGAGGAGTCTCGCCGA	12	-	122762637-122762686		PREDICTED: Homo sapiens hypothetical protein LOC643842 (LOC643842), mRNA.					
Homo sapiens	RefSeq	NM_006621.3	ILMN_21551	AHCYL1	NM_006621.4	NM_006621.4		10768	111120323	NM_006621.4	AHCYL1	NP_006612.2	ILMN_1770412	0001170440	S	2398	CCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCTTAGAAG	1	+	110366263-110366312	1p13.3b	Homo sapiens adenosylhomocysteinase-like 1 (AHCYL1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine [goid 4013] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine [goid 4013] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	XPVKONA; PRO0233; IRBIT; DCAL	XPVKONA; PRO0233; IRBIT; DCAL
Homo sapiens	RefSeq	XM_937653.1	ILMN_138876	LOC648590	XM_937653.1	XM_937653.1		648590	88959082	XM_937653.1	LOC648590	XP_942746.1	ILMN_1815034	0007510612	S	685	TTATTGATTTTTTATAATAGCATTTATGGCGTGTTGAATTGTGGCCCCCC					PREDICTED: Homo sapiens hypothetical protein LOC648590 (LOC648590), mRNA.					
Homo sapiens	RefSeq	NM_181301.1	ILMN_6848	CMTM1	NM_181270.2	NM_181270.2		113540	148743788	NM_181270.2	CMTM1	NP_851787.1	ILMN_1693494	0007510097	A	674	CACCCCCGAGCTCGCATGCTGTCACCCATTCCAGCCTAAATGTGACCATA	16	+	65170462-65170511	16q21e	Homo sapiens CKLF-like MARVEL transmembrane domain containing 1 (CMTM1), transcript variant 2, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	CKLFH; CKLFSF1; CKLFH1; MGC71870	CKLFH; CKLFSF1; CKLFH1; MGC71870
Homo sapiens	RefSeq	XM_065899.2	ILMN_36588	LOC130773	XM_065899.3	XM_065899.3		130773	113412873	XM_065899.3	LOC130773	XP_065899.1	ILMN_1672009	0003830593	S	111	CAGCCACACAAAAAACAAGATCCACATGTCACCCACCTTCCGGAGGCCCA	2	-	64428229-64428278	2p14c	PREDICTED: Homo sapiens similar to 60S ribosomal protein L23a (LOC130773), mRNA.					
Homo sapiens	RefSeq	NM_002487.2	ILMN_23775	NDN	NM_002487.2	NM_002487.2		4692	10800414	NM_002487.2	NDN	NP_002478.1	ILMN_1692058	0000060184	S	1461	GGCCCTTCATGACCTTGCTGGGCACAGAAAACACCCTCGTGGAGTACACT	15	-	23930940-23930989	15q11.2d	Homo sapiens necdin homolog (mouse) (NDN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The portion of the cell soma (cell body) that excludes the nucleus [goid 43204] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9630521] [evidence TAS]; The orderly movement of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system [goid 8347] [evidence IEA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IEA]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]; Long distance growth of a single axon process involved in cellular development [goid 48676] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with the microtubule constituent protein gamma-tubulin [goid 43015] [evidence IEA]	HsT16328	HsT16328
Homo sapiens	RefSeq	NR_003220.1	ILMN_173361	SNORD114-27	NR_003220.1	NR_003220.1		767608	115392022	NR_003220.1	SNORD114-27		ILMN_3309334	0002320142	S	5	CAGTGTTGACTACTGGTGTCGTGTGAGTCATACAATGAATACATGTCTGG	14	+	100524255-100524304	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 114-27 (SNORD114-27), small nucleolar RNA.				14q(II-27)	14q(II-27)
Homo sapiens	RefSeq	XM_926448.1	ILMN_44729	LOC653193	XM_926448.1	XM_926448.1		653193	88976405	XM_926448.1	LOC653193	XP_931541.1	ILMN_1717994	0007210747	S	89	AAAAATCTGCAGATGAACTGTGCGCGCCGCCCTACAGACGTTCGCACACC	4	+	75695488-75695506:75699637-75699667		PREDICTED: Homo sapiens similar to Amphiregulin precursor (AR) (Colorectum cell-derived growth factor) (CRDGF) (LOC653193), mRNA.					
Homo sapiens	RefSeq	XM_932406.1	ILMN_42530	LOC644814	XM_932406.1	XM_932406.1		644814	88984920	XM_932406.1	LOC644814	XP_937499.1	ILMN_1745201	0003420463	S	209	GTGTATCAGCCGGCATGGCGTCTCTGCCCCATGCCCTGGGCCGCCAGGGG	5	+	126593319-126593332:126593333-126593368		PREDICTED: Homo sapiens hypothetical protein LOC644814 (LOC644814), mRNA.					
Homo sapiens	RefSeq	NM_014910.2	ILMN_11628	ZNF507	NM_014910.3	NM_014910.3		22847	144922666	NM_014910.3	ZNF507	NP_055725.2	ILMN_1652300	0007380131	S	7404	AAAGAATCCGAGCATGGAAGCTCTAGAACGTATGGTCCAGTGTGGCAGCC	19	+	37570232-37570281	19q13.11a	Homo sapiens zinc finger protein 507 (ZNF507), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_178494.2	ILMN_168619	FLJ40125	NM_001080401.1	NM_001080401.1		147699	122937198	NM_001080401.1	FLJ40125	NP_001073870.1	ILMN_1803357	0006350196	S	1127	TCCCAGATTTACCTCCTGGGGGAGGGCTGGACTGCAAGGCCACTGTCATT	19	+	46003783-46003819:46003908-46003920	19q13.32a	Homo sapiens protein phosphatase 1B-like (FLJ40125), mRNA.					
Homo sapiens	RefSeq	NM_004893.2	ILMN_1183	H2AFY	NM_004893.2	NM_004893.2		9555	20336744	NM_004893.2	H2AFY	NP_004884.1	ILMN_2373495	0004260414	A	1612	CTGTCACCGAAGCCAGGAAGCCCCGTTTGTAAGCGTGTGTTGTGGTGCTT	5	-	134705205-134705254	5q31.1f	Homo sapiens H2A histone family, member Y (H2AFY), transcript variant 2, mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [pmid 9714746] [evidence NAS]; A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1740] [pmid 11331621] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 9714746] [evidence NAS]; Compensating for the two-fold variation in X:autosome chromosome ratios between sexes by a global activation or inactivation of all, or most of, genes on one or both of the X chromosomes [goid 7549] [pmid 15053874] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9714746] [evidence NAS]	H2A.y; H2A/y; H2AF12M; MACROH2A1.1; mH2A1; macroH2A1.2; H2AFJ	H2A.y; H2A/y; H2AF12M; MACROH2A1.1; mH2A1; macroH2A1.2; H2AFJ
Homo sapiens	RefSeq	NM_004893.2	ILMN_1183	H2AFY	NM_004893.2	NM_004893.2		9555	20336744	NM_004893.2	H2AFY	NP_004884.1	ILMN_2275437	0003710072	I	84	GGCAGGTTCCAGACTTCGGGGTGAGGAGGATTAACTGAAGGACCCCAGGG	5	-	134763343-134763392	5q31.1f	Homo sapiens H2A histone family, member Y (H2AFY), transcript variant 2, mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [pmid 9714746] [evidence NAS]; A structure found in a female mammalian cell containing an unpaired X chromosome that has become densely heterochromatic, silenced and localized at the nuclear periphery [goid 1740] [pmid 11331621] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 9714746] [evidence NAS]; Compensating for the two-fold variation in X:autosome chromosome ratios between sexes by a global activation or inactivation of all, or most of, genes on one or both of the X chromosomes [goid 7549] [pmid 15053874] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9714746] [evidence NAS]	H2A.y; H2A/y; H2AF12M; MACROH2A1.1; mH2A1; macroH2A1.2; H2AFJ	H2A.y; H2A/y; H2AF12M; MACROH2A1.1; mH2A1; macroH2A1.2; H2AFJ
Homo sapiens	RefSeq	NM_001135189.1	ILMN_366209	AGFG1	NM_001135189.1	NM_001135189.1		3267	206597508	NM_001135189.1	AGFG1	NP_001128661.1	ILMN_3260345	0004280681	M	8306	CAGGACCTTCTAGTCAGCAGGGCATGTTTGGAAAATGTTAATACGCCATG	2	+	228425698-228425747	2q36.3c	Homo sapiens ArfGAP with FG repeats 1 (AGFG1), transcript variant 4, mRNA.					
Homo sapiens	RefSeq	NM_001002918.1	ILMN_179300	OR8D2	NM_001002918.1	NM_001002918.1		283160	50897291	NM_001002918.1	OR8D2	NP_001002918.1	ILMN_1745928	0002810273	S	465	GGCCACAGTCCATACTACCCGCATGTCAGTGTTGTCATTCTGTAGGTCTC	11	-	124189579-124189628	11q24.2a	Homo sapiens olfactory receptor, family 8, subfamily D, member 2 (OR8D2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	JCG2	JCG2
Homo sapiens	RefSeq	XM_928201.1	ILMN_38497	LOC645164	XM_928201.1	XM_928201.1		645164	88973395	XM_928201.1	LOC645164	XP_933294.1	ILMN_1807430	0000290164	S	106	CCAGAAGAAGGCATCATTATCACAGACAGCTCCATGCACAGTATTGCCCC	4	+	18869798-18869847		PREDICTED: Homo sapiens hypothetical protein LOC645164 (LOC645164), mRNA.					
Homo sapiens	RefSeq	XM_931037.1	ILMN_39610	LOC642716	XM_931037.1	XM_931037.1		642716	88984318	XM_931037.1	LOC642716	XP_936130.1	ILMN_1684208	0004860129	S	181	AACAGTGTGAGAGAAACCTGTGACTTGCTTCTAACCCATAGGATATGGCA	5	-	96175724-96175769:96234745-96234748		PREDICTED: Homo sapiens hypothetical protein LOC642716 (LOC642716), mRNA.					
Homo sapiens	RefSeq	NM_138401.2	ILMN_16311	FAM125A	NM_138401.2	NM_138401.2		93343	51871119	NM_138401.2	FAM125A	NP_612410.1	ILMN_2121207	0000290309	S	1074	TGCCGGGCAGGGCTGGAGCTGGACAGAAGCCAGTGCCTTTAAGTCATTTG	19	+	17397021-17397070	19p13.11d	Homo sapiens family with sequence similarity 125, member A (FAM125A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	FLJ32495; CFBP	FLJ32495; CFBP
Homo sapiens	RefSeq	XM_926263.1	ILMN_165518	LOC730713	XM_001126896.1	XM_001126896.1		730713	113413627	XM_001126896.1	LOC730713	XP_001126896.1	ILMN_1769220	0002350092	S	388	GCCTTCCATCTTCTGCATGTGGGTTCCTGGATCACGGTCAGCACCGGCAT					PREDICTED: Homo sapiens hypothetical protein LOC730713 (LOC730713), mRNA.					
Homo sapiens	RefSeq	XM_936919.1	ILMN_165518	LOC730713	XM_001126896.1	XM_001126896.1		730713	113413627	XM_001126896.1	LOC730713	XP_001126896.1	ILMN_1697788	0002360301	S	1010	AGCTTTGTGAAATTTCTGGATTTGGTGAGAAGCCTCTGGTGTCTGGTTAG					PREDICTED: Homo sapiens hypothetical protein LOC730713 (LOC730713), mRNA.					
Homo sapiens	RefSeq	NM_003647.1	ILMN_7556	DGKE	NM_003647.1	NM_003647.1		8526	4503312	NM_003647.1	DGKE	NP_003638.1	ILMN_1717946	0003180543	S	2221	TACTGTCAAACCAGCATGGTTAATTGTGAGCATCCTCTGCAGCATGCCCC	17	+	52295581-52295630	17q22c	Homo sapiens diacylglycerol kinase, epsilon 64kDa (DGKE), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [pmid 8626589] [evidence TAS]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 8626589] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8626589] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	DAGK6; DGK	DAGK6; DGK
Homo sapiens	RefSeq	XR_001250.1	ILMN_171397	LOC285550	XR_017764.1	XR_017764.1		285550	113416013	XR_017764.1	LOC285550		ILMN_1675803	0000730608	A	4081	CTGCTGTAACCATCCAGAAACGGCATTGATGTTGCTTCACGTTGCTGATG				4p15.33a-p15.32d	PREDICTED: Homo sapiens misc_RNA (LOC285550), miscRNA.					
Homo sapiens	RefSeq	XR_037436.1	ILMN_346496	LOC729815	XR_037436.1	XR_037436.1		729815	169191536	XR_037436.1	LOC729815		ILMN_3226841	0002450450	A	92	GGTAGAGGACTCCTACAGATGAGAGCTCTGTGCTCAAGCCTTGCAGAGGG	10	-	80940327-80940352:80940569-80940592	10q22.3e	PREDICTED: Homo sapiens misc_RNA (LOC729815), miscRNA.					
Homo sapiens	RefSeq	NM_203488.1	ILMN_11780	ACYP1	NM_203488.1	NM_203488.1		97	45243546	NM_203488.1	ACYP1	NP_982355.1	ILMN_1686432	0005960142	I	197	GCTGAAACTCACAGCAAGAGCTGTGTTCCAGTTAGCTTTGCTACCAGTTA	14	-	75528391-75528440	14q24.3b	Homo sapiens acylphosphatase 1, erythrocyte (common) type (ACYP1), transcript variant 2, mRNA.		The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 3026468] [evidence TAS]	Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [evidence IEA]; Catalysis of the reaction: an acyl phosphate + H2O = a carboxylate + phosphate [goid 3998] [pmid 7796909] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ACYPE	ACYPE
Homo sapiens	RefSeq	NM_024733.2	ILMN_164876	ZNF665	NM_024733.3	NM_024733.3		79788	134254456	NM_024733.3	ZNF665	NP_079009.3	ILMN_1770634	0005390593	S	3218	GACAGAAGAGCACTGTGGGTATGGGAAGAAATTCTCTACTGGCCGGGCAC	19	-	58358387-58358436	19q13.41b	Homo sapiens zinc finger protein 665 (ZNF665), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZFP160L; FLJ14345	FLJ14345; ZFP160L
Homo sapiens	RefSeq	XM_933050.1	ILMN_37005	LOC348021	XM_944169.2	XM_944169.2		348021	113424272	XM_944169.2	LOC348021	XP_949262.1	ILMN_1757535	0006760092	A	1961	CACCCTACCTCCTTTTATAGACTTTAGGAGCAATGTCTTTGGAGGGGGCC				13q12.11a	PREDICTED: Homo sapiens hypothetical protein LOC348021 (LOC348021), mRNA.					
Homo sapiens	RefSeq	NM_181797.1	ILMN_29647	KCNQ1	NM_181797.1	NM_181797.1		3784	32479522	NM_181797.1	KCNQ1	NP_861462.1	ILMN_1688569	0004810091	I	185	GTCACGAGAGTGCAAAGTTCTGTGAAACGCTCCAGTGGTTACACGCCCCG	11	+	2499306-2499355	11p15.5a-p15.4d	Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 1 (KCNQ1), transcript variant 3, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8900283] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8900283] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8528244] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9020846] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8528244] [evidence NAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9020846] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 8900283] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	ATFB1; Kv1.9; WRS; LQT; RWS; Kv7.1; KCNA8; KVLQT1; KCNA9; LQT1	ATFB1; Kv1.9; WRS; LQT; RWS; Kv7.1; KCNA8; KVLQT1; KCNA9; LQT1
Homo sapiens	RefSeq	XM_293026.5	ILMN_34826	LOC344382	XM_293026.5	XM_293026.5		344382	88953187	XM_293026.5	LOC344382	XP_293026.5	ILMN_1752938	0004210639	S	470	ACCTATGGGGCAGGAACATCAAAGAGGCCCAAGACTGGACGGAATGCCCT	2	+	37857154-37857203	2p22.2a	PREDICTED: Homo sapiens similar to Serine-threonine kinase receptor-associated protein (UNR-interacting protein) (WD-40 repeat protein PT-WD) (MAP activator with WD repeats) (LOC344382), mRNA.					
Homo sapiens	RefSeq	XR_001514.1	ILMN_34026	DLEU2	XR_001514.1	XR_001514.1		8847	89036587	XR_001514.1	DLEU2		ILMN_1658607	0001500661	A	1233	CATTAGGAAGTGGTAGAAACTTTAAATCGCCCCAGAGTTTGCCTGTTTCC	13	-	49516020-49516069	13q14.3a	PREDICTED: Homo sapiens deleted in lymphocytic leukemia, 2 (DLEU2), misc RNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]			
Homo sapiens	RefSeq	NM_001013617.1	ILMN_20659	LOC541469	NM_001013617.1	NM_001013617.1		541469	61966684	NM_001013617.1	LOC541469	NP_001013639.1	ILMN_1702797	0002000674	S	1198	CTTGGTGAGCAGCGTCTGAGGGGTGAGGGGCATAGACTTGGAGCCAGCCT	19	-	43486253-43486302	19q13.2a	Homo sapiens hypothetical protein LOC541469 (LOC541469), mRNA.					
Homo sapiens	Unigene	Hs.197670	ILMN_81457	HS.197670	Hs.197670		Hs.197670		30213892	CB957775			ILMN_1909542	0007040026	S	189	CCAACTCAACCTGCTCACCAAAACCCAGCTTGTCATATCTCCTCTGGGCC	11	-	78790480-78790529		AGENCOURT_13667086 NIH_MGC_184 Homo sapiens cDNA clone IMAGE:30353345 5, mRNA sequence					
Homo sapiens	RefSeq	NM_019594.2	ILMN_18635	LRRC8A	NM_019594.2	NM_019594.2		56262	62241039	NM_019594.2	LRRC8A	NP_062540.2	ILMN_1739840	0005890364	S	4031	CCTGCTTTAGATCACTCGGGTCCCCACCTTAGAAGGGTCCCCGCCTTAGA	9	+	130719871-130719920	9q34.11c	Homo sapiens leucine rich repeat containing 8 family, member A (LRRC8A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ10337; KIAA1437; LRRC8	FLJ10337; KIAA1437; LRRC8
Homo sapiens	RefSeq	XM_931822.1	ILMN_41245	LOC643807	XM_931822.1	XM_931822.1		643807	88953373	XM_931822.1	LOC643807	XP_936915.1	ILMN_1721560	0000060020	S	30	CAAGGAGCTATTCCTGGCTCTCTCCGCTGGACTGCATACATTGAGCACAG	2	-	100133478-100133527		PREDICTED: Homo sapiens hypothetical protein LOC643807 (LOC643807), mRNA.					
Homo sapiens	RefSeq	XR_017263.2	ILMN_172183	LOC402360	XR_017263.2	XR_017263.2		402360	169180162	XR_017263.2	LOC402360		ILMN_3279354	0006270497	M	599	CCCCTTCAAAGAGGAAGGAGCTGGTCAGCAGTGGACCTGAAGAGGCTGCT	9	+	23672558-23672607	9p21.3b	PREDICTED: Homo sapiens similar to hCG1742476 (LOC402360), mRNA.					
Homo sapiens	RefSeq	NM_001001789.1	ILMN_1369	C21ORF24	NM_001001789.1	NM_001001789.1		400866	49169832	NM_001001789.1	C21orf24	NP_001001789.1	ILMN_1661954	0006510646	S	3065	CCGGCAGGAGCTGGACATGCAGATCCGGTTGTAATTGGTCTGGGACCATC	21	-	39043487-39043536	21q22.2a	Homo sapiens chromosome 21 open reading frame 24 (C21orf24), mRNA.					
Homo sapiens	RefSeq	NM_001001789.1	ILMN_1369	C21ORF24	NM_001001789.1	NM_001001789.1		400866	49169832	NM_001001789.1	C21orf24	NP_001001789.1	ILMN_2211724	0006900279	S	3439	AAAAATTAGCCAGGCGTGGTGGCGTGTGCCTGTAATCCCAGCAACTCAGG	21	-	39043113-39043162	21q22.2a	Homo sapiens chromosome 21 open reading frame 24 (C21orf24), mRNA.					
Homo sapiens	RefSeq	NM_000761.3	ILMN_19528	CYP1A2	NM_000761.3	NM_000761.3		1544	73915099	NM_000761.3	CYP1A2	NP_000752.2	ILMN_1683607	0001410019	S	3042	CACCAGCCCTGGCAACTGCTAATCTACTTTCTGTGTCTATGGATTTGCCT	15	+	72835909-72835958	15q24.1b	Homo sapiens cytochrome P450, family 1, subfamily A, polypeptide 2 (CYP1A2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 8553685] [evidence EXP]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 2813353] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 2813353] [evidence TAS]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 8553685] [evidence EXP]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the removal of a methyl group from a substrate [goid 32451] [pmid 2813353] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [pmid 2813353] [evidence IMP]	CP12; P450(PA); P3-450	CP12; P450(PA); P3-450
Homo sapiens	RefSeq	NM_021947.1	ILMN_17700	SRR	NM_021947.1	NM_021947.1		63826	11345491	NM_021947.1	SRR	NP_068766.1	ILMN_1753515	0000360463	S	2124	ACCCATGCAAGAGCCTGGTTTGTCATCCCTGCCCTAGCCCAATCTGAGGC	17	+	2174950-2174999	17p13.3c	Homo sapiens serine racemase (SRR), mRNA.		The chemical reactions and pathways involving L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6563] [pmid 11054547] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: L-threonine = D-threonine [goid 18114] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the synthesis of free D-serine from L-serine [goid 30378] [evidence IEA]	ILV1; ISO1	ILV1; ISO1
Homo sapiens	RefSeq	NM_001014832.1	ILMN_24614	PAK4	NM_001014832.1	NM_001014832.1		10298	62422556	NM_001014832.1	PAK4	NP_001014832.1	ILMN_1728887	0004490632	A	2596	TAACACTCTAGCCCCTGCCCTTATTGGGGGACAGATGGTCCCTGTCCTGC	19	+	39669877-39669926	19q13.2a	Homo sapiens p21 protein (Cdc42/Rac)-activated kinase 4 (PAK4), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9822598] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9822598] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9822598] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_014299.1	ILMN_22169	BRD4	NM_058243.2	NM_058243.2		23476	112789559	NM_058243.2	BRD4	NP_490597.1	ILMN_1774134	0002750161	A	2331	GGAGAGCTCCAGTGAGTCCAGCTCCTCTGACAGCGAAGACTCCGAAACAG	19	-	15355573-15355573:15364963-15365011	19p13.12b	Homo sapiens bromodomain containing 4 (BRD4), transcript variant long, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18305892] [evidence IPI]	HUNKI; MCAP; CAP	HUNKI; MCAP; CAP
Homo sapiens	RefSeq	NM_181762.1	ILMN_23146	UBE2A	NM_181762.1	NM_181762.1		7319	32967275	NM_181762.1	UBE2A	NP_861427.1	ILMN_2307455	0006960440	A	1157	CTGACACATCCTCTCTTTGCAAGCTGCTGACTGGGCACACTCATGCCAAG	X	+	118601858-118601907	Xq24c	Homo sapiens ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), transcript variant 2, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Pathways for DNA repair which occur after DNA has replicated, e.g. mismatch repair, and which involve translesion synthesis (TLS-type) DNA polymerases [goid 6301] [pmid 1559696] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 1559696] [evidence TAS]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBC2; RAD6A; HHR6A	UBC2; RAD6A; HHR6A
Homo sapiens	RefSeq	XM_936157.1	ILMN_34647	LOC642047	XM_936157.1	XM_936157.1		642047	88998674	XM_936157.1	LOC642047	XP_941250.1	ILMN_1679819	0002450326	I	3744	GCACTGCCATTACAGACCTGAACAATGCGGGGTGGTGTTGGGATTGCCTG					PREDICTED: Homo sapiens similar to HLA class I histocompatibility antigen, A-26 alpha chain precursor (MHC class I antigen A*26), transcript variant 1 (LOC642047), mRNA.					
Homo sapiens	RefSeq	NM_004370.4	ILMN_162740	COL12A1	NM_004370.5	NM_004370.5		1303	93141046	NM_004370.5	COL12A1	NP_004361.3	ILMN_1741695	0004850129	I	3530	CACCCTACGGGGGATGACAGAAGACTGGGGGAGTTAGTGGTTGGACCCTA	6	-	75922127-75922176	6q13c-q14.1a	Homo sapiens collagen, type XII, alpha 1 (COL12A1), transcript variant long, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A collagen homotrimer of alpha1(XII) chains; type XII collagen triple helices may link sheet-forming or fibrillar collagens to other structures [goid 5595] [pmid 1427837] [evidence NAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 3476925] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [pmid 1427837] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; A constituent of the extracellular matrix that enables the matrix to resist longitudinal stress [goid 30020] [pmid 1427837] [evidence NAS]	BA209D8.1; DJ234P15.1; COL12A1L	BA209D8.1; DJ234P15.1; COL12A1L
Homo sapiens	RefSeq	NM_004376.3	ILMN_13504	COX15	NM_078470.2	NM_078470.2		1355	37655159	NM_078470.2	COX15	NP_510870.1	ILMN_1718309	0004200100	A	3906	CTCTCGCTTGCTCTCTCTCACCATGTGACACACTGGCTCCCCTTCACCTT	10	-	101461705-101461754	10q24.2c	Homo sapiens COX15 homolog, cytochrome c oxidase assembly protein (yeast) (COX15), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [pmid 9878253] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The transfer of electrons from cytochrome c to oxygen that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex IV [goid 6123] [pmid 12474143] [evidence IC ]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]; The chemical reactions and pathways resulting in the formation of heme a, a derivative of heme found in cytochrome aa3 [goid 6784] [pmid 12474143] [evidence IGI]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 9878253] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase), the terminal member of the respiratory chain of the mitochondrion and some aerobic bacteria. Cytochrome c oxidases are multi-subunit enzymes containing from 13 subunits in the mammalian mitochondrial form to 3-4 subunits in the bacterial forms [goid 8535] [pmid 12474143] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [pmid 12474143] [evidence IC ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 9878253] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [pmid 9878253] [evidence TAS]		
Homo sapiens	RefSeq	NM_078470.2	ILMN_13504	COX15	NM_078470.2	NM_078470.2		1355	37655159	NM_078470.2	COX15	NP_510870.1	ILMN_2292696	0002490739	I	2204	GGCATGGGCCACCACGCCCAGCTAGTTCCTCTTTTGATAAGGCTGTTAAC	10	-	101463407-101463456	10q24.2c	Homo sapiens COX15 homolog, cytochrome c oxidase assembly protein (yeast) (COX15), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [pmid 9878253] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The transfer of electrons from cytochrome c to oxygen that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex IV [goid 6123] [pmid 12474143] [evidence IC ]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [evidence IEA]; The chemical reactions and pathways resulting in the formation of heme a, a derivative of heme found in cytochrome aa3 [goid 6784] [pmid 12474143] [evidence IGI]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 9878253] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase), the terminal member of the respiratory chain of the mitochondrion and some aerobic bacteria. Cytochrome c oxidases are multi-subunit enzymes containing from 13 subunits in the mammalian mitochondrial form to 3-4 subunits in the bacterial forms [goid 8535] [pmid 12474143] [evidence IMP]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [pmid 12474143] [evidence IC ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 9878253] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [pmid 9878253] [evidence TAS]		
Homo sapiens	RefSeq	XM_938485.1	ILMN_30740	LOC654056	XM_938485.1	XM_938485.1		654056	89057934	XM_938485.1	LOC654056	XP_943578.1	ILMN_1761790	0004120288	S	420	CGAGGCTCCACGGCTTGTAAATGATGGGACAGAAGGCATCCCCAGTCTGC					PREDICTED: Homo sapiens similar to Signal-regulatory protein beta-1 precursor (SIRP-beta-1) (LOC654056), mRNA.					
Homo sapiens	RefSeq	NR_002587.1	ILMN_11690	SNORD2	NR_002587.1	NR_002587.1		619567	77993289	NR_002587.1	SNORD2		ILMN_3237309	0004390482	S	13	GGCAATCATCTTTCGGGACTGACCTGAAATGAAGAGAATACTCATTGCTG	3	+	186502597-186502646	3q27.3a	Homo sapiens small nucleolar RNA, C/D box 2 (SNORD2), small nucleolar RNA.				R39B; SNR39B	R39B; SNR39B
Homo sapiens	RefSeq	XM_001713866.1	ILMN_339549	LOC100133718	XM_001713866.1	XM_001713866.1		100133718	169166813	XM_001713866.1	LOC100133718	XP_001713918.1	ILMN_3239312	0007380370	S	87	ATTCTGGTGGAAACCCAGTTTGGCCAATATACGCTGAGTGATTCCCCATG					PREDICTED: Homo sapiens hypothetical protein LOC100133718 (LOC100133718), mRNA.					
Homo sapiens	RefSeq	NM_014580.3	ILMN_403	SLC2A8	NM_014580.3	NM_014580.3		29988	51870928	NM_014580.3	SLC2A8	NP_055395.2	ILMN_1724609	0005870326	S	1772	GGATCTTTGTCTTCTGGCTGGAGGTGCTTTTGGAGGTTGGGTGCTGGGCA	9	+	129209642-129209691	9q33.3b	Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 8 (SLC2A8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10671487] [evidence TAS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 10671487] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [pmid 10671487] [evidence TAS]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [pmid 10671487] [evidence TAS]; Interacting selectively with the D- or L-enantiomer of glucose [goid 5536] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Interacting selectively with the D- or L-enantiomer of glucose [goid 5536] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Interacting selectively with the D- or L-enantiomer of glucose [goid 5536] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	GLUTX1; GLUT8	GLUTX1; GLUT8
Homo sapiens	Unigene	Hs.561259	ILMN_114752	HS.561259	Hs.561259		Hs.561259		27828364	BX096642			ILMN_1871107	0000510296	S	213	GCTCTAGTCCAGGGGTTCTCAAAGTATGGCTTCAGACAAGCCCCATTTGC	4	+	119169627-119169676		BX096642 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGp998M12139, mRNA sequence					
Homo sapiens	RefSeq	XM_001126807.1	ILMN_172200	FLJ37644	XM_001126807.1	XM_001126807.1		400618	113427027	XM_001126807.1	FLJ37644	XP_001126807.1	ILMN_3269324	0002570500	M	158	CCATCCATTTCTTGGAGAAGTGCCACGGTGGGGTTGCAAGTCCCAGGATC	17	-	67578910-67578959	17q24.3c	PREDICTED: Homo sapiens hypothetical gene supported by AK094963 (FLJ37644), mRNA.					
Homo sapiens	RefSeq	NM_005902.3	ILMN_16351	SMAD3	NM_005902.3	NM_005902.3		4088	52352808	NM_005902.3	SMAD3	NP_005893.1	ILMN_1682738	0006840328	S	5934	TGCAACTCGGCTGTTCTGGACTCTGATGTGTGTGGAGGGATGGGGAATAG	15	+	65274286-65274335	15q22.33b-q22.33c	Homo sapiens SMAD family member 3 (SMAD3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 14612439] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10549282] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9865696] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9311995] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11100470] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any protein group composed of two or more subunits, which may or may not be identical, which undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43235] [pmid 8774881] [evidence IMP]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 12411310] [evidence IMP]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 15334054] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 15107418] [evidence IMP]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 16886151] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 14555988] [evidence IMP]; The aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins [goid 7183] [pmid 10823886] [evidence IDA]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence IEA]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [evidence IEA]; Any process, either active or passive, by which a virus avoids or tolerates the effects of its host organism's defense(s). Host defenses may be induced by the presence of the virus or may be preformed (e.g. physical barriers). The host is defined as the larger of the organisms involved in a symbiotic interaction [goid 19049] [pmid 15334054] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 8774881] [evidence IDA]; Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta2 [goid 32909] [pmid 12411310] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus [goid 42993] [pmid 15799969] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [pmid 14555988] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process by which the anatomical structures of the paraxial mesoderm are generated and organized. Morphogenesis pertains to the creation of form [goid 48340] [evidence IEA]; Any process that modulates the frequency, rate or extent of epithelial cell proliferation [goid 50678] [evidence IEA]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IEA]	Interacting selectively with double-stranded DNA [goid 3690] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA];  [goid 15460] [pmid 15799969] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8774881] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 10823886] [evidence IDA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 8774881] [evidence IPI]	MADH3; JV15-2; HSPC193; MGC60396; Smad 3; HsT17436; DKFZp686J10186; DKFZP586N0721	MADH3; JV15-2; HSPC193; MGC60396; Smad 3; HsT17436; DKFZp686J10186; DKFZP586N0721
Homo sapiens	Unigene	Hs.368405	ILMN_87762	HS.368405	Hs.368405		Hs.368405		29735634	XM_087762			ILMN_1854544	0002900431	S	311	GAGGGAAGGAAAAGCCAGAGCCAGGTCTTGAGCTGAGGAGGGCAGAGTCT					PREDICTED: Homo sapiens hypothetical LOC153778 (LOC153778), mRNA					
Homo sapiens	RefSeq	NM_001001684.1	ILMN_8792	FLJ45831	NM_001001684.1	NM_001001684.1		400576	48717373	NM_001001684.1	FLJ45831	NP_001001684.1	ILMN_1774335	0006580681	S	2811	GGGATGTCCAGTGTGGTGTTATATACAAGTGGTAATTGTAAGTGTCCCTG	17	-	14611772-14611821	17p12b	Homo sapiens FLJ45831 protein (FLJ45831), mRNA.					
Homo sapiens	RefSeq	XM_941800.1	ILMN_35510	LOC652367	XM_941800.1	XM_941800.1		652367	88955152	XM_941800.1	LOC652367	XP_946893.1	ILMN_1658945	0001030050	S	61	GAGATGGACAAGGAAGATGTGGCTTTCAAGCAGAAACAAACAGAGGCTGA					PREDICTED: Homo sapiens similar to CG13364-PA (LOC652367), mRNA.					
Homo sapiens	RefSeq	NM_001333.2	ILMN_22377	CTSL2	NM_001333.2	NM_001333.2		1515	23110959	NM_001333.2	CTSL2	NP_001324.2	ILMN_1748352	0001430477	S	1201	GAGCTGATGGATGGTGAGGAGGAAGGACTTAAGGACAGCATGTCTGGGGA	9	-	99795182-99795230:99795231-99795231	9q22.33a	Homo sapiens cathepsin L2 (CTSL2), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 9563472] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17889653] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	CTSV; CATL2; CTSU; MGC125957	CTSV; CATL2; CTSU; MGC125957
Homo sapiens	RefSeq	XM_925934.1	ILMN_38171	LOC441662	XM_925934.1	XM_925934.1		441662	89036817	XM_925934.1	LOC441662	XP_931027.1	ILMN_1720242	0006510671	S	164	AGATCTTCAGTGCTATCCCACATCAGTGGCAACTTCATGCCAAGGCCCTG	13	-	87345027-87345076	13q31.2a	PREDICTED: Homo sapiens similar to CXXC finger 6 (LOC441662), mRNA.					
Homo sapiens	Unigene	Hs.569692	ILMN_121873	HS.569692	Hs.569692		Hs.569692		14440845	BI034219			ILMN_1877721	0001510768	S	32	CACGGGTAGCAGGTGTGCTCAGGGGGTCTGAGGCTTTCACGGATGTAAAT	16	-	86678604-86678620:86678958-86678969:86678972-86678992		PM3-NN0223-200301-008-b09 NN0223 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_031311.3	ILMN_18740	CPVL	NM_031311.3	NM_031311.3		54504	83641873	NM_031311.3	CPVL	NP_112601.3	ILMN_2400759	0000060136	A	1390	CTGACAGTGAAGTGGCTGGTTACATCCGGCAAGCGGGTGACTTCCATCAG	7	-	29105688-29105737	7p15.1c	Homo sapiens carboxypeptidase, vitellogenic-like (CPVL), transcript variant 1, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	HVLP; MGC10029	HVLP; MGC10029
Homo sapiens	RefSeq	NM_016499.2	ILMN_180361	TMEM216	NM_016499.3	NM_016499.3		51259	115387119	NM_016499.3	TMEM216	NP_057583.2	ILMN_1732577	0000520376	S	1104	TGAGCACGGAGAGCCTCATGTTGGTGGGTTTCCAGAGTGATGTGAAAGCC	11	+	60922728-60922777	11q12.2b	Homo sapiens transmembrane protein 216 (TMEM216), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XR_017331.2	ILMN_172438	LOC392301	XR_017331.2	XR_017331.2		392301	169180166	XR_017331.2	LOC392301		ILMN_3279652	0001990372	M	508	CGGGCAGTGCCGCTGGGGCCACATCCTTATGTTTTGTGTACCCTTTTGGT	9	-	32323947-32323996	9p21.1a	PREDICTED: Homo sapiens misc_RNA (LOC392301), miscRNA.					
Homo sapiens	RefSeq	NM_005462.3	ILMN_23606	MAGEC1	NM_005462.3	NM_005462.3		9947	58530875	NM_005462.3	MAGEC1	NP_005453.2	ILMN_1720041	0000010446	I	3759	GAGTTTCTACGTGGTGGAGGGCCTGGTTGAGGCTGGAGAGAACACAGTGC	X	+	140824329-140824378	Xq27.2a	Homo sapiens melanoma antigen family C, 1 (MAGEC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17137291] [evidence IPI]	MAGE-C1; MGC39366; CT7	MAGE-C1; MGC39366; CT7
Homo sapiens	RefSeq	NM_001715.2	ILMN_23414	BLK	NM_001715.2	NM_001715.2		640	33469981	NM_001715.2	BLK	NP_001706.2	ILMN_1668277	0006330471	S	2374	GGTGTTCAGGACTGGTAAGCGACTGTCATCAAGTAAGGCCCCCGTGCTGG	8	+	11420520-11420569	8p23.1b	Homo sapiens B lymphoid tyrosine kinase (BLK), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 2404338] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC10442	MGC10442
Homo sapiens	RefSeq	NM_173563.1	ILMN_8189	C6ORF146	NM_173563.1	NM_173563.1		222826	27734860	NM_173563.1	C6orf146	NP_775834.1	ILMN_2060719	0005720113	S	1961	CAGTCCCCCAAAATCACCAAACAGTTGCTTGATGTGATATGGAGTAGAAC	6	-	4068786-4068835	6p25.2a	Homo sapiens chromosome 6 open reading frame 146 (C6orf146), mRNA.				MGC43581	MGC43581
Homo sapiens	Unigene	Hs.493947	ILMN_96645	HS.493947	Hs.493947		Hs.493947		34528998	AK123449			ILMN_1870111	0006330215	S	1551	AGTCCAGGTATATTCCAGTGGTTTCTTACTGAGAGTTCATCCTAGTCCCC	9	-	69880806-69880855		Homo sapiens cDNA FLJ41455 fis, clone BRSTN2012284					
Homo sapiens	RefSeq	XM_938508.1	ILMN_42356	LOC649425	XM_938508.1	XM_938508.1		649425	89061509	XM_938508.1	LOC649425	XP_943601.1	ILMN_1735061	0006060707	S	65	GGACACTCGTTTGGGCCCTGAGCCAAAGTGAGGCCCTGCAAGCCTGCTTT					PREDICTED: Homo sapiens similar to double homeobox 4c (LOC649425), mRNA.					
Homo sapiens	RefSeq	NM_134325.1	ILMN_3106	SLC26A9	NM_134325.1	NM_134325.1		115019	20336287	NM_134325.1	SLC26A9	NP_599152.1	ILMN_2415277	0005290438	A	4109	GGTCACAGAGCCTCAGGAATTTCCAAGTCAGAGTCCCCTTTGAACCAAGT	1	-	204149262-204149311	1q32.1g	Homo sapiens solute carrier family 26, member 9 (SLC26A9), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3- [goid 15106] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion A(out) + anion B(in) = anion A(in) + anion B(out) [goid 15301] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]		
Homo sapiens	RefSeq	NM_199416.1	ILMN_24405	PRCC	NM_005973.4	NM_005973.4		5546	40807446	NM_005973.4	PRCC	NP_005964.3	ILMN_1802843	0006520156	A	1857	CAGGATCTCTTTCCCCAAGGACCCAGCCCTCGCCTCTGCGAGAATGAACA	1	+	155036967-155037016	1q23.1a	Homo sapiens papillary renal cell carcinoma (translocation-associated) (PRCC), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC17178; MGC4723; TPRC; RCCP1	MGC17178; MGC4723; TPRC; RCCP1
Homo sapiens	RefSeq	NM_005973.4	ILMN_24405	PRCC	NM_005973.4	NM_005973.4		5546	40807446	NM_005973.4	PRCC	NP_005964.3	ILMN_1809818	0001430243	I	1375	ATTATTACAGTGGTGGCTACTATCCTGCACAGGACCCGGCCCTGGTCCCC	1	+	155028114-155028163	1q23.1a	Homo sapiens papillary renal cell carcinoma (translocation-associated) (PRCC), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC17178; MGC4723; TPRC; RCCP1	MGC17178; MGC4723; TPRC; RCCP1
Homo sapiens	RefSeq	XR_001197.1	ILMN_137190	C9ORF29	XR_001197.1	XR_001197.1		652972	89030514	XR_001197.1	C9orf29		ILMN_1755698	0002630091	A	1015	GGGAGACAGATTTGAGGGTTTCCTTCCACTTCCTTGCTGGGTGGCCTGTG				9q31.3b	PREDICTED: Homo sapiens chromosome 9 open reading frame 29 (C9orf29), mRNA.					
Homo sapiens	Unigene	Hs.571515	ILMN_123696	HS.571515	Hs.571515		Hs.571515		26252005	BC040572			ILMN_1818562	0000670017	S	2982	TTGGGGACTGGCAGGTAGTTTTTCTCTCCCCTTTGATAGCCTGGGGCTTC	8	+	91732671-91732720		Homo sapiens cDNA clone IMAGE:5267453					
Homo sapiens	RefSeq	NM_006497.2	ILMN_306840	HIC1	NM_001098202.1	NM_001098202.1		3090	148237269	NM_001098202.1	HIC1	NP_001091672.1	ILMN_1738825	0000020477	S	2325	GCTCCACCTCTCGGCGGCCTCACCTGGCCTCACTGCTTCGTGCCTTAGCT	17	+	1909002-1909051	17p13.3d	Homo sapiens hypermethylated in cancer 1 (HIC1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7585125] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7585125] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hic-1; ZBTB29	hic-1; ZBTB29
Homo sapiens	RefSeq	NM_005297.2	ILMN_42012	MCHR1	NM_005297.3	NM_005297.3		2847	88758589	NM_005297.3	MCHR1	NP_005288.3	ILMN_1685096	0001450446	S	2163	TCTGCTTACTGAAAACAAGGAGACCTGGGGTGGGTGTGGTTGGGGGTCTT	22	+	39408504-39408553	22q13.2a	Homo sapiens melanin-concentrating hormone receptor 1 (MCHR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10421367] [evidence TAS]; An immotile primary cilium that may be missing the central pair of microtubules, or the central pair of microtubules and outer dynein arms. Some primary cilia also have altered arrangements of outer microtubules (fewer than nine and/or not always present as doublets). Nonmotile primary cilia typically function as sensory organelles that concentrate and organize sensory signaling molecules [goid 31513] [evidence ISS]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 10421367] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [pmid 10421367] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10421367] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [pmid 10421367] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [pmid 10860944] [evidence TAS]; Combining with the cyclic peptide hormone melanin-concentrating hormone to initiate a change in cell activity [goid 30273] [evidence IEA]	GPR24; MCH1R; SLC1; MGC32129	SLC1; MGC32129; MCHR1
Homo sapiens	RefSeq	NM_145752.1	ILMN_13279	CDIPT	NM_145752.1	NM_145752.1		10423	22027474	NM_145752.1	CDIPT	NP_665695.1	ILMN_1737003	0000050048	I	419	GCCTTGGCGGGCTCCCTGATCCTGCCCTGTCTCCCCGCGTCCCGTTCCAA	16	-	29781544-29781593	16p11.2d	Homo sapiens CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) (CDIPT), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + myo-inositol = CMP + phosphatidyl-1D-myo-inositol [goid 3881] [evidence IEA]; Enables the directed movement of phosphatidylinositol into, out of, within or between cells. Phosphatidylinositol refers to any glycophospholipids with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 8526] [pmid 9407135] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the reaction: CDP-diacylglycerol + myo-inositol = CMP + phosphatidyl-1D-myo-inositol [goid 3881] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [evidence IEA]	PIS1; PIS; MGC1328	PIS1; PIS; MGC1328
Homo sapiens	RefSeq	NM_006156.1	ILMN_21274	NEDD8	NM_006156.2	NM_006156.2		4738	148922866	NM_006156.2	NEDD8	NP_006147.1	ILMN_1785711	0007000722	S	23	AAGAGTGCTGGAGGGCGGCAGCGGCGACCGGAGCGGTAGGAGCAGCAATT	14	-	24701504-24701553	14q12a	Homo sapiens neural precursor cell expressed, developmentally down-regulated 8 (NEDD8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9353319] [evidence TAS]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9694792] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9694792] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9353319] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9694792] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15567417] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	Nedd-8; MGC125896; MGC104393; MGC125897; FLJ43224	Nedd-8; MGC125896; MGC104393; MGC125897
Homo sapiens	RefSeq	XM_497053.2	ILMN_39513	LOC441436	XM_497053.2	XM_497053.2		441436	89071599	XM_497053.2	LOC441436	XP_497053.2	ILMN_1762977	0007510601	S	1	ATGAGGCATCACAGTGATGTCCTGACTGCTCTACACTGGGCCTGTGCCAA					PREDICTED: Homo sapiens similar to RIKEN cDNA 4930532L20 (LOC441436), mRNA.					
Homo sapiens	RefSeq	NM_152264.2	ILMN_15108	SLC39A13	NM_152264.2	NM_152264.2		91252	40255100	NM_152264.2	SLC39A13	NP_689477.2	ILMN_1730937	0001190706	S	1997	TTCCCCATTGAGGTTGGGGTAGGTGGGGGCGGTGAGGGCTCCACGTTGTC	11	+	47394331-47394380	11p11.2b	Homo sapiens solute carrier family 39 (zinc transporter), member 13 (SLC39A13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	FLJ25785	FLJ25785
Homo sapiens	RefSeq	NM_205852.1	ILMN_23058	CLEC12B	NM_205852.1	NM_205852.1		387837	45504360	NM_205852.1	CLEC12B	NP_995324.1	ILMN_1657527	0003780372	S	2416	GGTGTTGCTACTAGACTGAGGGTTTCCAGGAGTAGTACTATGACATCATG	12	+	10061201-10061250	12p13.2c	Homo sapiens C-type lectin domain family 12, member B (CLEC12B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	UNQ5782	UNQ5782
Homo sapiens	RefSeq	XM_944772.1	ILMN_40125	LOC648898	XM_944772.1	XM_944772.1		648898	89026143	XM_944772.1	LOC648898	XP_949865.1	ILMN_1674584	0006620192	I	4	GAGAGGTTTTGCAACAGGGCCAAGATCTCACAGTGTTCCTCTCTTTAAGT					PREDICTED: Homo sapiens hypothetical protein LOC648898, transcript variant 1 (LOC648898), mRNA.					
Homo sapiens	RefSeq	NM_178510.1	ILMN_15172	ANKK1	NM_178510.1	NM_178510.1		255239	30425443	NM_178510.1	ANKK1	NP_848605.1	ILMN_1797873	0000780338	S	2345	GTGGCCACTCTGGGTGGTTCTAAGCCAGGAGCCGAGATGGAAATTTAGAC	11	+	112776152-112776199:112776200-112776201	11q23.1d	Homo sapiens ankyrin repeat and kinase domain containing 1 (ANKK1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PKK2	PKK2
Homo sapiens	RefSeq	NM_175882.1	ILMN_5810	IMP5	NM_175882.1	NM_175882.1		162540	38524590	NM_175882.1	IMP5	NP_787078.1	ILMN_1744094	0004260035	S	1698	CCGAGGAGCAGGGGACTTAGACAGCAACCCTGGAGAAGACACCACTGAGA	17	+	41279750-41279799	17q21.31e	Homo sapiens intramembrane protease 5 (IMP5), mRNA.				SPPL2c	SPPL2c
Homo sapiens	RefSeq	NM_002063.2	ILMN_19757	GLRA2	NM_002063.2	NM_002063.2		2742	40254460	NM_002063.2	GLRA2	NP_002054.1	ILMN_1788786	0004120402	S	2809	GGAGATGGTGTGTCCTGAACAGTGTAGCTCAGGTCAGCTTGAACTTTCCA	X	+	14659448-14659497	Xp22.2	Homo sapiens glycine receptor, alpha 2 (GLRA2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2155780] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 2155780] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 2155780] [evidence IDA]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA];  [goid 4891] [pmid 2155780] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [pmid 2155780] [evidence IDA]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [pmid 2155780] [evidence IDA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	GLR	GLR
Homo sapiens	Unigene	Hs.581975	ILMN_134156	HS.581975	Hs.581975		Hs.581975		28290167	BX119487			ILMN_1903822	0001990470	S	241	GCCCCATGAGTGGAAGGGATTTGCCTCACGCCACAGTGAACAAGGGGAAG	4	-	9645318-9645367		BX119487 NCI_CGAP_Kid3 Homo sapiens cDNA clone IMAGp998P204568 ; IMAGE:1866115, mRNA sequence					
Homo sapiens	RefSeq	NM_005742.2	ILMN_9638	PDIA6	NM_005742.2	NM_005742.2		10130	38679894	NM_005742.2	PDIA6	NP_005733.1	ILMN_1680626	0000010463	S	1125	GAAAATGTGGGGGTGGCTGTGGACAGAAGCTGGAGCCCAGTCTGAACTTG	2	-	10927527-10927565:10928823-10928833	2p25.1c	Homo sapiens protein disulfide isomerase family A, member 6 (PDIA6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16130169] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 7590364] [evidence TAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [pmid 7590364] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	P5; TXNDC7; ERP5	P5; TXNDC7; ERP5
Homo sapiens	RefSeq	NM_024296.3	ILMN_26263	CCDC28B	NM_024296.3	NM_024296.3		79140	110349768	NM_024296.3	CCDC28B	NP_077272.2	ILMN_2099586	0006200561	S	588	CACTGAGGGGCTGCCAGAGGAGCAGAAGAAGACAATGGCTGACCGTAACC	1	+	32442498-32442547	1p35.1b	Homo sapiens coiled-coil domain containing 28B (CCDC28B), mRNA.				RP4-622L5.5; MGC16441; MGC1203	RP4-622L5.5; MGC1203
Homo sapiens	RefSeq	NM_182917.2	ILMN_5831	EIF4G1	NM_182917.2	NM_182917.2		1981	38201620	NM_182917.2	EIF4G1	NP_886553.2	ILMN_1672902	0000670138	I	72	GCTAGCTCCGTTCGTGATCCGGGAGCCTGGTGCCAGCGAGACCTGGAATT	3	+	185515859-185515908	3q27.1b	Homo sapiens eukaryotic translation initiation factor 4 gamma, 1 (EIF4G1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8449919] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15314020] [evidence EXP]; The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome [goid 16281] [pmid 9857202] [evidence TAS]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 9372926] [evidence NAS]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 8961935] [evidence NAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 9372926] [evidence TAS]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 8961935] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10970864] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10996799] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713657] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12054647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14701818] [evidence IPI]	EIF4G; p220; EIF4F; DKFZp686A1451	EIF4G; p220; EIF4F; DKFZp686A1451
Homo sapiens	RefSeq	NM_004953.2	ILMN_5831	EIF4G1	NM_182917.2	NM_182917.2		1981	38201620	NM_182917.2	EIF4G1	NP_886553.2	ILMN_1768470	0003930189	A	5162	CGGTGGCAGTGGGTGCCTGTAGTGTGATGTGTCTGAACTAATAAAGTGGC	3	+	185535478-185535527	3q27.1b	Homo sapiens eukaryotic translation initiation factor 4 gamma, 1 (EIF4G1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8449919] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15314020] [evidence EXP]; The eukaryotic translation initiation factor 4F complex is composed of eIF4E, eIF4A and eIF4G; it is involved in the recognition of the mRNA cap, ATP-dependent unwinding of the 5'-terminal secondary structure and recruitment of the mRNA to the ribosome [goid 16281] [pmid 9857202] [evidence TAS]	The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 9372926] [evidence NAS]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 8961935] [evidence NAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 9372926] [evidence TAS]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 8961935] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10970864] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10996799] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713657] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12054647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14701818] [evidence IPI]	EIF4G; p220; EIF4F; DKFZp686A1451	EIF4G; p220; EIF4F; DKFZp686A1451
Homo sapiens	RefSeq	NM_022469.3	ILMN_24616	GREM2	NM_022469.3	NM_022469.3		64388	71164891	NM_022469.3	GREM2	NP_071914.3	ILMN_1678816	0003440068	S	3594	GGAAGTCCACTGTTAGTCTCTCCGTTAGCACCAGGGACACACTTGTTCTG	1	-	240653412-240653461	1q43d	Homo sapiens gremlin 2, cysteine knot superfamily, homolog (Xenopus laevis) (GREM2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 17029022] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	DAND3; PRDC; CKTSF1B2	DAND3; PRDC; CKTSF1B2
Homo sapiens	RefSeq	NM_015247.1	ILMN_28818	CYLD	NM_015247.1	NM_015247.1		1540	14165257	NM_015247.1	CYLD	NP_056062.1	ILMN_1775508	0003460692	S	4799	GCTAGCCCTGCCTCCATCTCCCTTGGGTAAAATGAAGGGTGTGGGGTAAA	16	+	49389457-49389506	16q12.1c	Homo sapiens cylindromatosis (turban tumor syndrome) (CYLD), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10835629] [evidence NAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	KIAA0849; USPL2; CDMT; HSPC057; CYLD1; EAC	KIAA0849; USPL2; CDMT; HSPC057; CYLD1; EAC
Homo sapiens	RefSeq	XM_001715125.1	ILMN_353159	LOC100129026	XM_001715125.1	XM_001715125.1		100129026	169167395	XM_001715125.1	LOC100129026	XP_001715177.1	ILMN_3197504	0002360092	A	1	TTGAAATTTCAATAGAAATGCCATAATTTATTCCATTGTATAAAAAAGTC	5	+	172127698-172127747	5q35.1e	PREDICTED: Homo sapiens hypothetical protein LOC100129026 (LOC100129026), mRNA.					
Homo sapiens	RefSeq	XM_939671.1	ILMN_139336	RNF151	XM_939671.1	XM_939671.1		146310	89040621	XM_939671.1	RNF151	XP_944764.1	ILMN_1745330	0006370360	A	607	GACCAAGCCACCAGTGTCGTTCGTAGAGAGCTGGCGGAGCTCAGCAACTT				16p13.3e	PREDICTED: Homo sapiens ring finger protein 151 (RNF151), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_016406.1	ILMN_22495	UFC1	NM_016406.1	NM_016406.1		51506	7705480	NM_016406.1	UFC1	NP_057490.1	ILMN_2110281	0004780136	S	805	GTGCATCACACTTAACTCATCTAACTGCTTCCCCGGACACCCTCCACCTC	1	+	159394968-159395017	1q23.3a	Homo sapiens ubiquitin-fold modifier conjugating enzyme 1 (UFC1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	HSPC155	HSPC155
Homo sapiens	RefSeq	NM_012225.1	ILMN_10701	NUBP2	NM_012225.1	NM_012225.1		10101	6912539	NM_012225.1	NUBP2	NP_036357.1	ILMN_1657237	0006960730	S	877	TGACTAAGGCCACCTTGCAGCCGCTTTCCAGGGCCACCAAGGGCTCTGCT	16	+	1778714-1778716:1778717-1778763	16p13.3e	Homo sapiens nucleotide binding protein 2 (MinD homolog, E. coli) (NUBP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 10486206] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	CFD1; NUBP1	CFD1; NUBP1
Homo sapiens	RefSeq	XM_294077.5	ILMN_39588	LOC346157	XM_294077.5	XM_294077.5		346157	88992586	XM_294077.5	LOC346157	XP_294077.4	ILMN_1699758	0005890008	A	1158	CAGACATCAGCACCTTCATACTAAAGAGTGCTTCAGCGCCTTCTCCACAC	6	+	27477175-27477201:27482704-27482726	6p22.1c	PREDICTED: Homo sapiens similar to dJ153G14.3 (novel C2H2 type Zinc Finger protein) (LOC346157), mRNA.					
Homo sapiens	RefSeq	NM_014211.1	ILMN_22876	GABRP	NM_014211.1	NM_014211.1		2568	7657105	NM_014211.1	GABRP	NP_055026.1	ILMN_1689146	0004810209	S	2735	TTGCGGGTGAGCTGCCCTCTCCAAATCCAGCCAGAGATGCACATTCCTCG	5	+	170173096-170173145	5q35.1c	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, pi (GABRP), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [pmid 9182563] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC126386; MGC126387	MGC126386; MGC126387
Homo sapiens	RefSeq	XM_001717274.1	ILMN_334113	LOC100130098	XM_001717274.1	XM_001717274.1		100130098	169173012	XM_001717274.1	LOC100130098	XP_001717326.1	ILMN_3175715	0005720239	A	840	TCTCATCCAGCAGCACCAGCCTGAAAAAGCAGTGGCTTGCACCACCACAC	8	-	96154136-96154185	8q22.1c	PREDICTED: Homo sapiens similar to hCG2008575 (LOC100130098), mRNA.					
Homo sapiens	RefSeq	XR_038432.1	ILMN_338319	LOC100132240	XR_038432.1	XR_038432.1		100132240	169160838	XR_038432.1	LOC100132240		ILMN_3203196	0003850288	A	491	CGCAGCTGTATCATTCACCTGCTATAGACTTTGAGCAAGACCTCTCTGAG				1p22.1b	PREDICTED: Homo sapiens misc_RNA (LOC100132240), miscRNA.					
Homo sapiens	RefSeq	XM_001726093.1	ILMN_335445	LOC100129831	XM_001726093.1	XM_001726093.1		100129831	169213464	XM_001726093.1	LOC100129831	XP_001726145.1	ILMN_3253560	0006220609	M	255	TATTTTTGGCATCTTGGCAGCTGAGCCCCCCTCGGCATCCCCCCAGGCCC	19	+	2245911-2245960	19p13.3g	PREDICTED: Homo sapiens EPWW6493 (LOC100129831), mRNA.					
Homo sapiens	RefSeq	XM_927195.1	ILMN_32523	LOC643937	XM_927195.1	XM_927195.1		643937	89029401	XM_927195.1	LOC643937	XP_932288.1	ILMN_1797634	0003610437	S	932	GGGGTCTGAGCAGTACATGCCTGTTCAGTGGTGCCTAGTCACTAGGTTTC	9	-	66111266-66111315		PREDICTED: Homo sapiens hypothetical protein LOC643937 (LOC643937), mRNA.					
Homo sapiens	RefSeq	NM_003731.1	ILMN_12147	SSNA1	NM_003731.1	NM_003731.1		8636	4505324	NM_003731.1	SSNA1	NP_003722.1	ILMN_1715705	0003190735	S	596	TTCATGCTCACACAGGCTATGGGGATGGTGGGCTCCAGGTCAGCTCTGCA	9	+	139204377-139204426	9q34.3e	Homo sapiens Sjogren syndrome nuclear autoantigen 1 (SSNA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9430706] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]		Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	NA14; NA-14; N14	NA14; NA-14; N14
Homo sapiens	RefSeq	NM_138960.3	ILMN_174493	LOC730419	XM_001124910.1	XM_001124910.1		730419	113430506	XM_001124910.1	LOC730419	XP_001124910.1	ILMN_1712038	0002470685	S	485	TCTGTGCCGGCCAAGTCAGGGCCCAGTGGTCCAGACAATGTACAAAGCCT					PREDICTED: Homo sapiens similar to TGFB-induced factor 2-like, Y-linked (LOC730419), mRNA.					TGIFLX; MGC34726
Homo sapiens	RefSeq	NM_139214.2	ILMN_174493	LOC730419	XM_001124910.1	XM_001124910.1		730419	113430506	XM_001124910.1	LOC730419	XP_001124910.1	ILMN_1765734	0002340367	S	507	CCAGTGGTCCAGACAATGTACAAAGCCTGCCCCTGTGGCCCTTGCCAAAG					PREDICTED: Homo sapiens similar to TGFB-induced factor 2-like, Y-linked (LOC730419), mRNA.					TGIFLY
Homo sapiens	RefSeq	XM_001723858.1	ILMN_341910	LOC100131683	XM_001723858.1	XM_001723858.1		100131683	169167191	XM_001723858.1	LOC100131683	XP_001723910.1	ILMN_3284036	0003120703	M	466	TCAGGTTCAAACCATGGGGAACCAGCAGGGTGGGGACCCTCAGACCCTCT				4q35.1f	PREDICTED: Homo sapiens hypothetical protein LOC100131683 (LOC100131683), mRNA.					
Homo sapiens	RefSeq	XM_927498.1	ILMN_42399	LOC644335	XM_927498.1	XM_927498.1		644335	89028277	XM_927498.1	LOC644335	XP_932591.1	ILMN_1672041	0003840603	S	1	ATGAGCAGCTTTTTTGAGCTAGAGCCTCCAACTGGCTCCTATTTGGGGCA	8	+	110861091-110861140	8q23.2a	PREDICTED: Homo sapiens similar to Est1p-like protein B (LOC644335), mRNA.					
Homo sapiens	RefSeq	NR_024351.1	ILMN_371242	NCRNA00160	NR_024351.1	NR_024351.1		54064	211904126	NR_024351.1	NCRNA00160		ILMN_3244329	0005960333	S	241	GCAGCTTCCATACAGCCTCACAGACAGGTGGCCCAGGAGTGACTTTATCC	21	+	36096437-36096486		Homo sapiens non-protein coding RNA 160 (NCRNA00160), non-coding RNA.					
Homo sapiens	RefSeq	XR_015954.2	ILMN_177455	LOC729349	XR_015954.2	XR_015954.2		729349	169165024	XR_015954.2	LOC729349		ILMN_3227772	0001110685	A	178	ACAGTGCGTACCATTCCGACATTACAACGGTAGAGTTGGCAGGTGTACCC	3	-	48137495-48137544	3p21.31f	PREDICTED: Homo sapiens misc_RNA (LOC729349), miscRNA.					
Homo sapiens	RefSeq	NM_017964.2	ILMN_11820	SLC30A6	NM_017964.2	NM_017964.2		55676	21687223	NM_017964.2	SLC30A6	NP_060434.2	ILMN_2151168	0001340072	S	2135	GCTGGGATTAGGTGTGAGCCACCGCACCTGGCCGATATTTTCTTTAATGA	2	+	32299998-32300047	2p22.3e	Homo sapiens solute carrier family 30 (zinc transporter), member 6 (SLC30A6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [evidence IEA]	Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	MGC45055; FLJ31101; ZNT6	MGC45055; FLJ31101; ZNT6
Homo sapiens	RefSeq	NM_017964.2	ILMN_11820	SLC30A6	NM_017964.2	NM_017964.2		55676	21687223	NM_017964.2	SLC30A6	NP_060434.2	ILMN_1699365	0005890411	S	1033	CAAGGATGACTGGATTAGGCCTGCCTTATTGTCTGGGCCTGTTGCAGCCA	2	+	32298896-32298945	2p22.3e	Homo sapiens solute carrier family 30 (zinc transporter), member 6 (SLC30A6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [evidence IEA]	Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	MGC45055; FLJ31101; ZNT6	MGC45055; FLJ31101; ZNT6
Homo sapiens	RefSeq	NM_001001290.1	ILMN_28034	SLC2A9	NM_001001290.1	NM_001001290.1		56606	47933388	NM_001001290.1	SLC2A9	NP_001001290.1	ILMN_1668312	0003930546	A	1436	GCACCGTCAACTGGCTCTCCAACTTTGCTGTTGGGCTCCTCTTCCCATTC	4	-	9836510-9836559	4p16.1b	Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 9 (SLC2A9), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10860667] [evidence NAS]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [pmid 10860667] [evidence NAS]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [pmid 10860667] [evidence NAS]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	GLUTX; GLUT9	GLUTX; GLUT9
Homo sapiens	RefSeq	NM_001001290.1	ILMN_28034	SLC2A9	NM_001001290.1	NM_001001290.1		56606	47933388	NM_001001290.1	SLC2A9	NP_001001290.1	ILMN_1723803	0000150497	I	43	TGGACTCCAGAGGGGCATGAAAACTCTTCCTGAAGGAGATGCAGAGGAAG	4	-	10041780-10041829	4p16.1b	Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 9 (SLC2A9), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10860667] [evidence NAS]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [pmid 10860667] [evidence NAS]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [pmid 10860667] [evidence NAS]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	GLUTX; GLUT9	GLUTX; GLUT9
Homo sapiens	RefSeq	NM_001013660.1	ILMN_6594	FRRS1	NM_001013660.2	NM_001013660.2		391059	147900820	NM_001013660.2	FRRS1	NP_001013682.2	ILMN_1735488	0003840343	S	2153	GACCGGATTCGTAGCCTGGCATGTTGGGACTGAGGTTGTTCTGGAGTTGA	1	-	100174811-100174815:100176390-100176434	1p21.2a	Homo sapiens ferric-chelate reductase 1 (FRRS1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: 2 Fe2+ + NAD+ = 2 Fe3+ + NADH + H+ [goid 293] [pmid 14499595] [evidence ISS]; Catalysis of the reaction: 3,4-dihydroxyphenethylamine + ascorbate + O2 = noradrenaline + dehydroascorbate + H2O [goid 4500] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SDR2; SDFR2	SDR2; SDFR2
Homo sapiens	RefSeq	XM_496214.2	ILMN_44498	LOC653118	XM_496214.2	XM_496214.2		653118	89041506	XM_496214.2	LOC653118	XP_496214.2	ILMN_1724632	0004060647	S	56	TGTGTTCCTGGCCTTTGGAACCCCTTCATCATATTCCGCAGGTGAGGCAG	17	-	33652108-33652117:33675229-33675268		PREDICTED: Homo sapiens similar to aminopeptidase puromycin sensitive (LOC653118), mRNA.					
Homo sapiens	RefSeq	NM_152680.1	ILMN_2086	TMEM154	NM_152680.1	NM_152680.1		201799	22749366	NM_152680.1	TMEM154	NP_689893.1	ILMN_2088124	0001110300	S	2736	GAAGTTAGTATACAGCCAGAACAGCCAAGCCTCAATTCTTGTACCTTGTG	4	-	153767020-153767069	4q31.3c	Homo sapiens transmembrane protein 154 (TMEM154), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ32028	FLJ32028
Homo sapiens	RefSeq	NM_152680.1	ILMN_2086	TMEM154	NM_152680.1	NM_152680.1		201799	22749366	NM_152680.1	TMEM154	NP_689893.1	ILMN_1683494	0002230433	S	2498	TCCAACCCTATCAAATAATGAACTTCTCAGAGAGGCATCTGGGGTCCTGG	4	-	153767258-153767307	4q31.3c	Homo sapiens transmembrane protein 154 (TMEM154), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ32028	FLJ32028
Homo sapiens	RefSeq	NM_017767.1	ILMN_19261	SLC39A4	NM_017767.2	NM_017767.2		55630	115430258	NM_017767.2	SLC39A4	NP_060237.2	ILMN_1715668	0001400286	I	300	GGAAGGGCGCCAGGGGTTGAGAGAGGATGGTGGACGTTGTTGGACTTGAA	8	-	145641568-145641592:145641593-145641617	8q24.3h	Homo sapiens solute carrier family 39 (zinc transporter), member 4 (SLC39A4), transcript variant 1, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; The lipid bilayer surrounding a recycling endosome [goid 55038] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	MGC74741; ZIP4; FLJ20327; AEZ	ZIP4; FLJ20327; AEZ
Homo sapiens	RefSeq	NM_182910.1	ILMN_25880	SYNE2	NM_182910.2	NM_182910.2		23224	118918398	NM_182910.2	SYNE2	NP_878914.1	ILMN_1745668	0002320274	I	200	GCAGAACTCATTTTCATACTGTAACCTGATGCCATGTCACCCGTGACCCG	14	+	63752624-63752673	14q23.2b	Homo sapiens spectrin repeat containing, nuclear envelope 2 (SYNE2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	NUANCE; DKFZP434H2235; KIAA1011; FLJ46790; NUA; FLJ11014; DKFZp686H1931; SYNE-2; FLJ45710; Nesprin-2; FLJ43727; DKFZp686E01115	NUANCE; DKFZP434H2235; KIAA1011; FLJ46790; NUA; DKFZp686H1931; SYNE-2; Nesprin-2
Homo sapiens	RefSeq	XM_938873.1	ILMN_38813	LOC649804	XM_938873.1	XM_938873.1		649804	89030254	XM_938873.1	LOC649804	XP_943966.1	ILMN_1717767	0004220446	S	13	CTGCCACCCTACAGACACCAGAAGGGTAGATTCAGCAGTAGTTTGTTCCC					PREDICTED: Homo sapiens hypothetical protein LOC649804 (LOC649804), mRNA.					
Homo sapiens	RefSeq	NM_022371.2	ILMN_21685	TOR3A	NM_022371.3	NM_022371.3		64222	115647956	NM_022371.3	TOR3A	NP_071766.2	ILMN_1768181	0000430411	S	1782	CTCAGAGGCTGTAGGGTCCTTGGGTTACAGAGCCGGGGAGAACGAAGTTC	1	+	177331412-177331461	1q25.2c	Homo sapiens torsin family 3, member A (TOR3A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ22345; ADIR; MGC111104; ADIR2	FLJ22345; ADIR; MGC111104; ADIR2
Homo sapiens	Unigene	Hs.539736	ILMN_104708	HS.539736	Hs.539736		Hs.539736		5804360	AI979341			ILMN_1866427	0001070132	S	370	CAGGAAGTCAGGAGGAGCAGAGAAATGAACTGGGGGTGGGACAGGAGCAC	13	+	42311933-42311951		wu03g11.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2515940 3, mRNA sequence					
Homo sapiens	RefSeq	NM_021080.3	ILMN_2699	DAB1	NM_021080.3	NM_021080.3		1600	33350927	NM_021080.3	DAB1	NP_066566.3	ILMN_1758871	0004920639	S	2221	CCAGCAAAAGCGAAGAGCAAGAAGCTCCTGATGGATCACAGGCCTCATCC	1	-	57489243-57489292	1p32.2b-p32.2a	Homo sapiens disabled homolog 1 (Drosophila) (DAB1), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]			
Homo sapiens	RefSeq	NM_000637.2	ILMN_14467	GSR	NM_000637.2	NM_000637.2		2936	50301237	NM_000637.2	GSR	NP_000628.2	ILMN_1775182	0005220762	S	1661	GAACCAGGAGACACGTGTGGCGGGCAGTGGGACCCATAGATCTTCTGAAA	8	-	30656528-30656577	8p12e	Homo sapiens glutathione reductase (GSR), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 947404] [evidence EXP]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 glutathione + NADP+ = glutathione disulfide + NADPH + H+ [goid 4362] [evidence IEA]; Catalysis of the reaction: 2 glutathione + NADP+ = glutathione disulfide + NADPH + H+ [goid 4362] [pmid 947404] [evidence TAS]; Catalysis of the reaction: 2 glutathione + NADP+ = glutathione disulfide + NADPH + H+ [goid 4362] [pmid 947404] [evidence EXP]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 947404] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]	MGC78522	MGC78522
Homo sapiens	RefSeq	NM_000637.2	ILMN_14467	GSR	NM_000637.2	NM_000637.2		2936	50301237	NM_000637.2	GSR	NP_000628.2	ILMN_2127416	0004540392	S	2199	CATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTCAAACTCCCACCTTCAG	8	-	30655990-30656039	8p12e	Homo sapiens glutathione reductase (GSR), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 947404] [evidence EXP]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 glutathione + NADP+ = glutathione disulfide + NADPH + H+ [goid 4362] [evidence IEA]; Catalysis of the reaction: 2 glutathione + NADP+ = glutathione disulfide + NADPH + H+ [goid 4362] [pmid 947404] [evidence TAS]; Catalysis of the reaction: 2 glutathione + NADP+ = glutathione disulfide + NADPH + H+ [goid 4362] [pmid 947404] [evidence EXP]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 947404] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]	MGC78522	MGC78522
Homo sapiens	RefSeq	XM_001714964.1	ILMN_351667	LOC100129315	XM_001714964.1	XM_001714964.1		100129315	169210225	XM_001714964.1	LOC100129315	XP_001715016.1	ILMN_3272356	0003290450	M	328	CTCCAGGCCATCAGCATCAGCCCCAGCACCTCCTGGTTGGCAAGGTTTAA				16p11.2c	PREDICTED: Homo sapiens hypothetical protein LOC100129315 (LOC100129315), mRNA.					
Homo sapiens	RefSeq	XM_934199.1	ILMN_34535	LOC647031	XM_934199.1	XM_934199.1		647031	89036706	XM_934199.1	LOC647031	XP_939292.1	ILMN_2163025	0005700673	S	276	GGCCTCTCCATTGGCCGGGACCCACTCAGCCTTGGGAGCTTTAAATTCGA	13	-	41743915-41743964	13q14.11c	PREDICTED: Homo sapiens hypothetical LOC647031 (LOC647031), mRNA.					
Homo sapiens	RefSeq	NM_173174.1	ILMN_24109	PTK2B	NM_173174.1	NM_173174.1		2185	27886585	NM_173174.1	PTK2B	NP_775266.1	ILMN_1765189	0005960612	I	554	TGGGGTAAGAGTGGAACATCCAAATGGAAGAGTCCAGCAGCTGAAAGGAC	8	+	27180844-27180893	8p21.2a	Homo sapiens PTK2B protein tyrosine kinase 2 beta (PTK2B), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7499242] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10867021] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7529876] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10880513] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 8939945] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7499242] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10867021] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [pmid 7529876] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10867021] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 8497321] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10867021] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9020138] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PYK2; FAK2; FRNK; CAKB; RAFTK; FADK2; PTK; CADTK; PKB	PYK2; FAK2; FRNK; CAKB; RAFTK; FADK2; PTK; CADTK; PKB
Homo sapiens	RefSeq	NM_004829.3	ILMN_46292	NCR1	NM_004829.4	NM_004829.4		9437	89363035	NM_004829.4	NCR1	NP_004820.1	ILMN_1750761	0005080288	S	952	ACAGTGGCCATGGGTGGATCTGAAAGCTGGTGTTGAGCCTGGGCGGCGTG	19	+	60116068-60116117	19q13.42b	Homo sapiens natural cytotoxicity triggering receptor 1 (NCR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9730896] [evidence NAS]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence ISS]	A defense response that is mediated by cells [goid 6968] [pmid 9730896] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9730896] [evidence TAS]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [pmid 9730896] [evidence NAS]; Any process that modulates the frequency, rate, or extent of natural killer cell mediated cytotoxicity [goid 42269] [pmid 15654827] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5057] [pmid 9730896] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD335; NK-p46; LY94; NKP46	CD335; NK-p46; LY94; NKP46
Homo sapiens	RefSeq	NM_001013732.1	ILMN_17433	C6ORF138	NM_001013732.2	NM_001013732.2		442213	148277105	NM_001013732.2	C6orf138	NP_001013754.2	ILMN_1742467	0002140561	S	2367	CGAACCTGACCTTCACACTGTTCAAATGCTTGCTGCTCACTGGGGGTTGC	6	-	47954156-47954205	6p12.3d	Homo sapiens chromosome 6 open reading frame 138 (C6orf138), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]; Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]	dJ402H5.2; FLJ41841	
Homo sapiens	RefSeq	XM_930061.1	ILMN_32927	LOC653807	XM_930061.1	XM_930061.1		653807	89038507	XM_930061.1	LOC653807	XP_935154.1	ILMN_1727233	0004230113	S	9	GCATGGCATCCTCCTTTTTGTTCCCCCAACCCAGGTCTGCTTCAAATACT	15	-	80616149-80616198		PREDICTED: Homo sapiens similar to cytoplasmic polyadenylation element binding protein 1 (LOC653807), mRNA.					
Homo sapiens	RefSeq	XR_040993.1	ILMN_334846	LOC729082	XR_040993.1	XR_040993.1		729082	169208598	XR_040993.1	LOC729082		ILMN_3297455	0003400086	M	968	CACAGAGGAGCTCCTAGGATTCCAGTTATCCTGCTAACATCTCCAGGAAG				15q15.1c	PREDICTED: Homo sapiens misc_RNA (LOC729082), miscRNA.					
Homo sapiens	RefSeq	NM_024423.1	ILMN_163844	DSC3	NM_024423.1	NM_024423.1		1825	13435368	NM_024423.1	DSC3	NP_077741.1	ILMN_1765363	0001440465	A	5341	CCCACTCACCGATCAAAACCTGCTACCTCCCCAAGACTTTACTAGTGCCG	18	-	26825545-26825594	18q12.1d	Homo sapiens desmocollin 3 (DSC3), transcript variant Dsc3b, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7929347] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7929347] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 7929347] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7929347] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DSC1; DSC4; CDHF3; DSC; HT-CP; DSC2	CDHF3; DSC; DSC2; DSC1; DSC4; HT-CP
Homo sapiens	RefSeq	NM_052952.1	ILMN_14363	DIRC1	NM_052952.1	NM_052952.1		116093	16418442	NM_052952.1	DIRC1	NP_443184.1	ILMN_1766986	0001660553	S	1252	GTGTGCACCTCCCCTCTTGCACTTTCTCTCCAGTCACCATGTGAAGTTCC	2	-	189306862-189306911	2q32.2a	Homo sapiens disrupted in renal carcinoma 1 (DIRC1), mRNA.					
Homo sapiens	RefSeq	NM_004877.1	ILMN_29191	GMFG	NM_004877.1	NM_004877.1		9535	4758439	NM_004877.1	GMFG	NP_004868.1	ILMN_1711617	0003370452	S	469	TCCTCAGGTGACTGGGGACTTGGAACCCTAGGACCTGAACAACCAAGACT	19	-	44510871-44510920	19q13.2a	Homo sapiens glia maturation factor, gamma (GMFG), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7598724] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [pmid 8639570] [evidence TAS]; Increases the activity of an enzyme [goid 8047] [pmid 8798479] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MGC126867; GMF-GAMMA	MGC126867; GMF-GAMMA
Homo sapiens	RefSeq	NM_007053.2	ILMN_15995	CD160	NM_007053.2	NM_007053.2		11126	51702223	NM_007053.2	CD160	NP_008984.1	ILMN_1742001	0002190019	S	1298	GCACTGCTGGAGGAAGAGGAAGATTTGTGCAGACCAAGAGCACCACAGAC	1	-	145696009-145696058	1q21.1b	Homo sapiens CD160 molecule (CD160), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [pmid 9973372] [evidence IDA]	A defense response that is mediated by cells [goid 6968] [pmid 9743336] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9973372] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9973372] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9973372] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9973372] [evidence IDA]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 15494480] [evidence IDA]	NK1; BY55; NK28; FLJ46513	NK1; BY55; NK28; FLJ46513
Homo sapiens	RefSeq	NM_001025778.1	ILMN_12794	VRK3	NM_001025778.1	NM_001025778.1		51231	71164887	NM_001025778.1	VRK3	NP_001020949.1	ILMN_2348403	0000010731	A	1412	AAGTTTGTTGATAAGCCGGGGCCCTTCGTGGGACCCTGCGGTCACTGGAT	19	-	55176034-55176082:55183441-55183441	19q13.33b	Homo sapiens vaccinia related kinase 3 (VRK3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18617507] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_001025778.1	ILMN_12794	VRK3	NM_001025778.1	NM_001025778.1		51231	71164887	NM_001025778.1	VRK3	NP_001020949.1	ILMN_1771697	0003290576	A	1566	TGCAGGATCTGCGTGTGTCTCCATATGACCCCATTGGCCTCCCGATGGTG	19	-	55174168-55174217	19q13.33b	Homo sapiens vaccinia related kinase 3 (VRK3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18617507] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	Unigene	Hs.209253	ILMN_82087	HS.209253	Hs.209253		Hs.209253		34531425	AK125352			ILMN_1836531	0006060114	S	1758	CAGTATATGTCAGCATTTCATTGGAGCCTGGGGGCAACAGACAAACTTGC	X	+	150624887-150624936		Homo sapiens cDNA FLJ43362 fis, clone NT2RP7017365					
Homo sapiens	Unigene	Hs.575816	ILMN_127997	HS.575816	Hs.575816		Hs.575816		3753729	AI201123			ILMN_1903512	0006200152	S	100	AGGCAGCAGACTCGAATAGGTCCATATCCCACCAGTGAGCAGGCTGAGGT	1	+	218725164-218725213		qf64e12.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1754830 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001719369.1	ILMN_334291	LOC100130855	XM_001719369.1	XM_001719369.1		100130855	169208201	XM_001719369.1	LOC100130855	XP_001719421.1	ILMN_3230388	0006020538	I	986	AACGCTGATGGGAAGAAGGTGCTGACAGATGGACTCACTGGGGTCACGGC	15	-	61636162-61636211	15q22.31a	PREDICTED: Homo sapiens hypothetical protein LOC100130855 (LOC100130855), mRNA.					
Homo sapiens	RefSeq	XR_015477.2	ILMN_166062	PATL2	XR_015477.2	XR_015477.2		197135	169208181	XR_015477.2	PATL2		ILMN_3306672	0002970494	M	1533	CCATACAGCTTGGACAGACATGGTGGTTCTGATTGCCTGGGAGATAGCCC	15	-	42745993-42746031:42746596-42746606	15q21.1a	PREDICTED: Homo sapiens misc_RNA (PATL2), miscRNA.					
Homo sapiens	RefSeq	XM_001719791.1	ILMN_335612	LOC728597	XM_001719791.1	XM_001719791.1		728597	169164175	XM_001719791.1	LOC728597	XP_001719843.1	ILMN_3230712	0001070377	I	1838	AAACAGGAGGCGCCGGGGCCTCCATCAGTGGGTTTCCTGAGTGGCTGTGT				2p25.3a	PREDICTED: Homo sapiens hypothetical LOC728597 (LOC728597), mRNA.					
Homo sapiens	RefSeq	XM_001719791.1	ILMN_335612	LOC728597	XM_001719791.1	XM_001719791.1		728597	169164175	XM_001719791.1	LOC728597	XP_001719843.1	ILMN_3221375	0000050477	A	1176	CTGGAAGTCTCCAAGGGTGCCCAGTGAGGTCCAACAAAGGTATGCGAATG				2p25.3a	PREDICTED: Homo sapiens hypothetical LOC728597 (LOC728597), mRNA.					
Homo sapiens	RefSeq	XM_379380.2	ILMN_34312	LOC401222	XM_379380.3	XM_379380.3		401222	113416883	XM_379380.3	LOC401222	XP_379380.2	ILMN_1752740	0002320746	S	193	GAACTTCTTCAAGGTGGTGAGTTCTTCTCAGACCCCCAACCACTGGCTCC	5	+	177142116-177142165	5q35.3b	PREDICTED: Homo sapiens hypothetical LOC401222 (LOC401222), mRNA.					
Homo sapiens	RefSeq	NM_153261.3	ILMN_20778	C16ORF69	NM_153261.3	NM_153261.3		255919	37059796	NM_153261.3	C16orf69	NP_694993.2	ILMN_2135991	0006770681	S	1959	CTTTGAACTGCAGCAATAAAACCCTCAGCTCCTAAGAAGTCTTAAGAGGG	16	+	48628362-48628411	16q12.1c	Homo sapiens chromosome 16 open reading frame 69 (C16orf69), mRNA.				FLJ38101; DKFZp313D2416	FLJ38101; DKFZp313D2416
Homo sapiens	RefSeq	NM_181775.3	ILMN_22206	PLXNA4	NM_181775.3	NM_181775.3		91584	157738642	NM_181775.3	PLXNA4	NP_861440.2	ILMN_3223471	0000450471	A	1400	GGGCCAGAAGCGGAAAATGAAATCCCTGGATGAGTCGGCCCTGTGCATCT	7	-	132192380-132192429	7q32.3c-q32.3d	Homo sapiens plexin A4 (PLXNA4), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PRO34003; PLEXA4; FAYV2820; DKFZp434G0625PRO34003; PLXNA4B; FLJ38287; FLJ35026; PLXNA4; KIAA1550; PLXNA4A; DKFZp566O0546; DKFZp434G0625	PRO34003; FAYV2820; DKFZp434G0625PRO34003; DKFZp434G0625
Homo sapiens	RefSeq	NM_181775.3	ILMN_22206	PLXNA4	NM_181775.3	NM_181775.3		91584	157738642	NM_181775.3	PLXNA4	NP_861440.2	ILMN_3231596	0003360026	I	1749	TCCTTCGGCACAGGTCCACAAGGGGGAATCACCCAGGAGTGGATTGGAGT	7	-	132169722-132169771	7q32.3c-q32.3d	Homo sapiens plexin A4 (PLXNA4), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PRO34003; PLEXA4; FAYV2820; DKFZp434G0625PRO34003; PLXNA4B; FLJ38287; FLJ35026; PLXNA4; KIAA1550; PLXNA4A; DKFZp566O0546; DKFZp434G0625	PRO34003; FAYV2820; DKFZp434G0625PRO34003; DKFZp434G0625
Homo sapiens	RefSeq	NM_173200.1	ILMN_18917	NR4A3	NM_173200.1	NM_173200.1		8013	27894360	NM_173200.1	NR4A3	NP_775292.1	ILMN_1774586	0006270398	I	25	GTCAAGATTTCATCCCATACATGCATGACTCAATCAGATTTGGAAATGTG	9	+	101628854-101628873:101628874-101628903	9q31.1a	Homo sapiens nuclear receptor subfamily 4, group A, member 3 (NR4A3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8634690] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [pmid 8570200] [evidence TAS]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [pmid 8570200] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [pmid 9573341] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CHN; CSMF; TEC; NOR1; MINOR	CHN; CSMF; TEC; NOR1; MINOR
Homo sapiens	RefSeq	NM_018941.2	ILMN_21198	CLN8	NM_018941.3	NM_018941.3		2055	148277059	NM_018941.3	CLN8	NP_061764.2	ILMN_1701094	0000290661	S	4529	GTCGTGGTTCAGGCAGTATGGGCCGCTGTGACAAAACACCTAAGACTGGG	8	+	1719321-1719370	8p23.3a	Homo sapiens ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) (CLN8), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10861296] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10861296] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10508524] [evidence NAS]; The lipid bilayer surrounding any of the compartments of the ER-Golgi intermediate compartment system [goid 33116] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1306] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [pmid 16086686] [evidence IMP]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [pmid 12151215] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10508524] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 16086686] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [pmid 12151215] [evidence NAS]; The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21522] [evidence IEA]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by individual cells [goid 44257] [evidence IEA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [pmid 12151215] [evidence NAS]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [pmid 12151215] [evidence NAS]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system [goid 50881] [evidence IEA]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]; Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51348] [evidence IEA]; The uptake of L-glutamate by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters [goid 51935] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IEA]		FLJ39417; EPMR; C8orf61	EPMR
Homo sapiens	RefSeq	NM_001034061.1	ILMN_21198	CLN8	NM_018941.3	NM_018941.3		2055	148277059	NM_018941.3	CLN8	NP_061764.2	ILMN_1684576	0005130066	S	6737	CTGTGCAGAACCCAGCACACGTGATTTTGTGTGACATGCCAGCAGCCTGG	8	+	1721529-1721578	8p23.3a	Homo sapiens ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) (CLN8), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10861296] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10861296] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10508524] [evidence NAS]; The lipid bilayer surrounding any of the compartments of the ER-Golgi intermediate compartment system [goid 33116] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1306] [evidence IEA]; The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [pmid 16086686] [evidence IMP]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [pmid 12151215] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial membrane, the lipid bilayer surrounding a mitochondrion [goid 7006] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10508524] [evidence IMP]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 16086686] [evidence IMP]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [pmid 12151215] [evidence NAS]; The process whereby neuroepithelial cells in the ventral neural tube acquire specialized structural and/or functional features of motor neurons. Motor neurons innervate an effector (muscle or glandular) tissue and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 21522] [evidence IEA]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by individual cells [goid 44257] [evidence IEA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [pmid 12151215] [evidence NAS]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [pmid 12151215] [evidence NAS]; The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system [goid 50881] [evidence IEA]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]; Any process that stops or reduces the rate of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51348] [evidence IEA]; The uptake of L-glutamate by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters [goid 51935] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IEA]		FLJ39417; EPMR; C8orf61	FLJ39417
Homo sapiens	RefSeq	NR_002184.1	ILMN_21268	DJ222E13.2	NR_002184.1	NR_002184.1		91695	54400741	NR_002184.1	dJ222E13.2		ILMN_2124790	0007380408	S	1740	TGCAGGTCAGGAGCGCCTCCCACAGTGAGTTTCCCCCACACTCGGCTCCT	22	-	41299736-41299785	22q13.2b	Homo sapiens similar to CGI-96 (dJ222E13.2) on chromosome 22.					
Homo sapiens	RefSeq	NM_002846.2	ILMN_15646	PTPRN	NM_002846.2	NM_002846.2		5798	18860905	NM_002846.2	PTPRN	NP_002837.1	ILMN_1658576	0003850603	S	3350	CTGGGAGTTCCCTGAACATCTGTGTGTGTCCCCCTATGCTCCAGTATGGA	2	-	220154577-220154626	2q35f	Homo sapiens protein tyrosine phosphatase, receptor type, N (PTPRN), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8024693] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5001] [pmid 8024693] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16273344] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11043403] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16273344] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11043403] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16273344] [evidence IPI]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	R-PTP-N; IA-2/PTP; IA-2; ICA512; FLJ16131; IA2	R-PTP-N; IA-2/PTP; IA-2; ICA512; FLJ16131; IA2
Homo sapiens	RefSeq	NM_003146.2	ILMN_28740	SSRP1	NM_003146.2	NM_003146.2		6749	28416943	NM_003146.2	SSRP1	NP_003137.1	ILMN_2233099	0000840400	S	2597	TTTGGGGAGAGATAGGGTGGGAGGCAGGGCAATGCAGGATCCAAATCCTC	11	-	57093631-57093680	11q12.1a	Homo sapiens structure specific recognition protein 1 (SSRP1), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1372440] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	FACT; T160; FACT80	FACT; T160; FACT80
Homo sapiens	RefSeq	NM_001004336.1	ILMN_175182	FLJ90757	XR_017883.1	XR_017883.1		440465	113427076	XR_017883.1	FLJ90757		ILMN_1758642	0006130300	S	1518	AGGGCGCTTCACCACTGGGCTCTTCCTCCCAGACCCATAACCCTTGTCTT	17	-	76618390-76618439	17q25.3f	PREDICTED: Homo sapiens hypothetical protein LOC440465 (FLJ90757), misc RNA.					FLJ14444; FLJ42772; FLJ31993; FLJ39290; MGC131745
Homo sapiens	RefSeq	NM_018335.2	ILMN_8908	ZNF839	NM_018335.3	NM_018335.3		55778	153251839	NM_018335.3	ZNF839	NP_060805.3	ILMN_1777487	0002260376	S	2471	GGGCCTCAGCCTGGCCCACATGGATCACTATTGACTGAAGGGTGTCTCAG	14	+	101877949-101877998	14q32.31c	Homo sapiens zinc finger protein 839 (ZNF839), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ11132	FLJ11132
Homo sapiens	RefSeq	XM_926285.1	ILMN_43631	LOC642903	XM_926285.1	XM_926285.1		642903	89060137	XM_926285.1	LOC642903	XP_931378.1	ILMN_1711466	0002970487	S	74	ATGTGAAGCCAGTGGATCTCACCTTGTTGGGCTCCATGGGGGTTGGGATC	X	+	116640982-116641031		PREDICTED: Homo sapiens hypothetical protein LOC642903 (LOC642903), mRNA.					
Homo sapiens	RefSeq	NM_006037.2	ILMN_19556	HDAC4	NM_006037.3	NM_006037.3		9759	153085394	NM_006037.3	HDAC4	NP_006028.2	ILMN_1764396	0005900468	S	8279	GGTGATGTATGGCTAAGATTTCACTTTAAGCAGTCGTGAACTGTGCGAGC	2	-	239971084-239971133	2q37.3d	Homo sapiens histone deacetylase 4 (HDAC4), mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12711221] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12711221] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12711221] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 10523670] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10523670] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HD4; HDAC-A; KIAA0288; HA6116; HDACA	HD4; HDAC-A; KIAA0288; HA6116; HDACA
Homo sapiens	RefSeq	NM_006684.1	ILMN_1994	CFHR4	NM_006684.2	NM_006684.2		10877	117320517	NM_006684.2	CFHR4	NP_006675.2	ILMN_1665855	0005050128	S	622	GGAAACACCACAGGTTCCATAGTGTGTGGTGAAGATGGGTGGTCCCATTT	1	+	195150361-195150410	1q31.3c	Homo sapiens complement factor H-related 4 (CFHR4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [pmid 9038172] [evidence TAS]	RP4-608O15.2; FHR-4; CFHL4; FHR4	RP4-608O15.2; CFHL4; FHR-4; FHR4
Homo sapiens	Unigene	Hs.539177	ILMN_104353	HS.539177	Hs.539177		Hs.539177		3734463	AI183825			ILMN_1844823	0005260167	S	92	tgggggCTGAGACACAGGAAGACCATGTGACTTGTGCAAAAGCCCACAGC					qe14g03.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1738996 3, mRNA sequence					
Homo sapiens	RefSeq	NM_138459.2	ILMN_25047	C6ORF68	NM_138459.2	NM_138459.2		116150	34147547	NM_138459.2	C6orf68	NP_612468.1	ILMN_1768684	0007320537	S	2572	CATTTATGATTTTTTAAATACACTTGAAATAAAAATGATTAAACTAAAAA	6	+	118136397-118136444	6q22.2b	Homo sapiens chromosome 6 open reading frame 68 (C6orf68), mRNA.				MGC7199; MGC117249; MGC:7199	MGC117249; MGC7199; MGC:7199
Homo sapiens	RefSeq	NM_002314.2	ILMN_27158	LIMK1	NM_002314.2	NM_002314.2		3984	8051616	NM_002314.2	LIMK1	NP_002305.1	ILMN_1698649	0006020767	I	1047	GAGGAGCTGCAGCATCGACAGGTCTCCGGGCGCTGGCTCACTGGGCTCCC	7	+	73159276-73159325	7q11.23b	Homo sapiens LIM domain kinase 1 (LIMK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8537403] [evidence TAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8537403] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10436159] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10428028] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 10436159] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8689688] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10428028] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of axon extension [goid 45773] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8537403] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12361576] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15220930] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16837009] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	LIMK	LIMK
Homo sapiens	RefSeq	XM_001127963.1	ILMN_166050	LOC728544	XM_001127963.1	XM_001127963.1		728544	113421841	XM_001127963.1	LOC728544	XP_001127963.1	ILMN_3220765	0000620768	A	262	CCGTGTACTGCTGGACTCATCCAACCCTTCGTGGACATCACTTTGTAGTG				10p15.1d	PREDICTED: Homo sapiens similar to hCG2017827 (LOC728544), mRNA.					
Homo sapiens	RefSeq	NM_004675.2	ILMN_13884	DIRAS3	NM_004675.2	NM_004675.2		9077	58530880	NM_004675.2	DIRAS3	NP_004666.1	ILMN_2174215	0000150114	S	1470	TGTTGATCATTAGGGGTGTGGGAGCAGAGAAAATTGTGAAAGTGACTCTC	1	-	68511756-68511805	1p31.3a	Homo sapiens DIRAS family, GTP-binding RAS-like 3 (DIRAS3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9874798] [evidence TAS]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [pmid 9874798] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 9874798] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9874798] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	NOEY2; ARHI	NOEY2; ARHI
Homo sapiens	RefSeq	NM_004675.2	ILMN_13884	DIRAS3	NM_004675.2	NM_004675.2		9077	58530880	NM_004675.2	DIRAS3	NP_004666.1	ILMN_1688877	0006370221	S	913	CCAGGAGCCCGAGAAGAAATCCCAGATGCCCAACACCACTGAGAAGCTGC	1	-	68512313-68512362	1p31.3a	Homo sapiens DIRAS family, GTP-binding RAS-like 3 (DIRAS3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9874798] [evidence TAS]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [pmid 9874798] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 9874798] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9874798] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	NOEY2; ARHI	NOEY2; ARHI
Homo sapiens	RefSeq	NM_033109.2	ILMN_22316	PNPT1	NM_033109.2	NM_033109.2		87178	33695110	NM_033109.2	PNPT1	NP_149100.1	ILMN_1810608	0004060050	S	2762	GTGCCCAACAACTTTACTTGCCTACAACGGTTCACAAACTGGAACAGGCC	2	-	55716417-55716466	2p16.1d	Homo sapiens polyribonucleotide nucleotidyltransferase 1 (PNPT1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence IEA]	Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the reaction: ATP + RNA(n) = diphosphate + RNA(n+1) [goid 4654] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp762K1914; old-35; OLD35; PNPASE	DKFZp762K1914; old-35; OLD35; PNPASE
Homo sapiens	RefSeq	NM_033109.2	ILMN_22316	PNPT1	NM_033109.2	NM_033109.2		87178	33695110	NM_033109.2	PNPT1	NP_149100.1	ILMN_2051408	0006040609	S	3198	GTAGTGAGCCGAGATTGCGCCATTGCACTCCAGCTCAGGCAACAAGAGCA	2	-	55715981-55716030	2p16.1d	Homo sapiens polyribonucleotide nucleotidyltransferase 1 (PNPT1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence IEA]	Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the reaction: ATP + RNA(n) = diphosphate + RNA(n+1) [goid 4654] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp762K1914; old-35; OLD35; PNPASE	DKFZp762K1914; old-35; OLD35; PNPASE
Homo sapiens	RefSeq	NM_021107.1	ILMN_28352	MRPS12	NM_021107.1	NM_021107.1		6183	11056055	NM_021107.1	MRPS12	NP_066930.1	ILMN_1754860	0006980487	I	255	CGGATCGGGGAGCATTTGCGGATCGGTCACTTTTTCCTCCTTTCTGAGTC	19	+	39421848-39421897	19q13.2a	Homo sapiens mitochondrial ribosomal protein S12 (MRPS12), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [pmid 9545647] [evidence TAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 9545647] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12970870] [evidence IPI]	MPR-S12; MT-RPS12; RPS12; RPSM12; RPMS12	MPR-S12; MT-RPS12; RPS12; RPSM12; RPMS12
Homo sapiens	RefSeq	NM_018208.1	ILMN_4993	ETNK2	NM_018208.1	NM_018208.1		55224	8922649	NM_018208.1	ETNK2	NP_060678.1	ILMN_1800130	0004560497	S	2111	GCCCTCAGGCCCTCCTTCCAGGGATGTCTCTCCAGCTCTACTTTATGTCC	1	-	202367083-202367132	1q32.1e-q32.1f	Homo sapiens ethanolamine kinase 2 (ETNK2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: ATP + choline = ADP + O-phosphocholine [goid 4103] [evidence NAS]; Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	FLJ10761; HMFT1716; RP11-74C13.2; EKI2	FLJ10761; HMFT1716; RP11-74C13.2; EKI2
Homo sapiens	RefSeq	NR_031602.1	ILMN_388528	MIR1237	NR_031602.1	NR_031602.1		100302280	269847068	NR_031602.1	MIR1237		ILMN_3309041	0002510139	S	51	GGGGCGGGGCCGAAGCGCGGCGACCGTAACTCCTTCTGCTCCGTCCCCCA					Homo sapiens microRNA 1237 (MIR1237), microRNA.					
Homo sapiens	RefSeq	NM_001017995.1	ILMN_28348	SH3PXD2B	NM_001017995.1	NM_001017995.1		285590	63055058	NM_001017995.1	SH3PXD2B	NP_001017995.1	ILMN_1764723	0001190437	S	7458	CTGCTTTGGGGAGCTTCCAAGTAACAGGCCATTTCTTACCTCCCTCCAGG	5	-	171693377-171693426	5q35.1e	Homo sapiens SH3 and PX domains 2B (SH3PXD2B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	HOFI; FLJ20831; KIAA1295	HOFI; FLJ20831; KIAA1295
Homo sapiens	Unigene	Hs.571837	ILMN_124018	HS.571837	Hs.571837		Hs.571837		2214033	AA484800			ILMN_1830913	0001740707	S	70	GTCATTCCAAACTGTCTGGCGTCCTGTCCCAAAACATCTCTGAACTTCTC	1	+	101413685-101413734		ng10c11.s1 NCI_CGAP_Li2 Homo sapiens cDNA clone IMAGE:929012, mRNA sequence					
Homo sapiens	Unigene	Hs.539450	ILMN_104528	HS.539450	Hs.539450		Hs.539450		2880192	AA810581			ILMN_1910316	0005690025	S	155	TCTCTCTCAACAAACCTTGCCTCTCAAAAGCCCACTTTGACAAGAGTCCT	12	+	22439730-22439779		oa85h04.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:1319095 3, mRNA sequence					
Homo sapiens	RefSeq	XR_018287.2	ILMN_174653	LOC399988	XR_018287.2	XR_018287.2		399988	169205125	XR_018287.2	LOC399988		ILMN_3200330	0004850136	A	1895	GTGCTTCCTCAGGGCCCACCATTGAAGAGGTTGATTAAGCCGACCCAAGT				12p13.32b	PREDICTED: Homo sapiens misc_RNA (LOC399988), miscRNA.					
Homo sapiens	RefSeq	NM_001135649.1	ILMN_371401	FOXI3	NM_001135649.1	NM_001135649.1		344167	208431823	NM_001135649.1	FOXI3	NP_001129121.1	ILMN_3245306	0002260184	S	1171	AGCGGGGGGCAAAGCAGCCCCTTCAGCAGCCCTTTCCACAACTTTAGCAT	2	-	88747767-88747816	2p11.2c	Homo sapiens forkhead box I3 (FOXI3), mRNA.					
Homo sapiens	Unigene	Hs.565887	ILMN_118299	HS.565887	Hs.565887		Hs.565887		18507929	BM458889			ILMN_1857295	0002070491	S	290	ACGCCTGGATGCGGCCGTTGTGGTTGCGGAAAAGCAGCATGGTTTCCTGT	3	+	135452672-135452721		AGENCOURT_6414453 NIH_MGC_72 Homo sapiens cDNA clone IMAGE:5557164 5, mRNA sequence					
Homo sapiens	RefSeq	NM_005595.1	ILMN_27763	NFIA	NM_005595.1	NM_005595.1		4774	30840979	NM_005595.1	NFIA	NP_005586.1	ILMN_1758049	0002320047	S	2218	ACATGGCCCGCAAGGACAATGAATCCACTCACATTGCAGAACAATTCCGA	1	+	61694189-61694238	1p31.3d	Homo sapiens nuclear factor I/A (NFIA), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15684392] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7590749] [evidence NAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7590749] [evidence NAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 7590749] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7590749] [evidence NAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15684392] [evidence IPI]	KIAA1439; NFI-L; DKFZp434L0422	KIAA1439; NFI-L; DKFZp434L0422
Homo sapiens	RefSeq	NM_015345.2	ILMN_3540	DAAM2	NM_015345.2	NM_015345.2		23500	40548414	NM_015345.2	DAAM2	NP_056160.2	ILMN_1752668	0001820747	S	5744	GTGCCCAGTCGGGGTGGCTGAGCTGGTCCTTAATAGGTTGTTTCTTGGTC	6	+	39872043-39872092	6p21.2a	Homo sapiens dishevelled associated activator of morphogenesis 2 (DAAM2), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	MGC90515; KIAA0381; RP1-278E11.1; dJ90A20A.1	MGC90515; KIAA0381; RP1-278E11.1; dJ90A20A.1
Homo sapiens	RefSeq	XM_001724787.1	ILMN_337291	LOC100129214	XM_001724787.1	XM_001724787.1		100129214	169194705	XM_001724787.1	LOC100129214	XP_001724839.1	ILMN_3255642	0001050441	M	3362	CACTGGCCACAGAGGTTTCCGGCTGGTGAAATGACACCCCAAGGATCCCA				10p11.23a	PREDICTED: Homo sapiens hypothetical protein LOC100129214 (LOC100129214), mRNA.					
Homo sapiens	RefSeq	NM_017714.1	ILMN_4752	TASP1	NM_017714.2	NM_017714.2		55617	98991768	NM_017714.2	TASP1	NP_060184.2	ILMN_1707326	0004290445	S	1496	CGTGCACTGCTCGAGACACAAGTGCTGCTGTAGTTAGCGCTTAGTGACAC	20	-	13509130-13509158:13509544-13509564	20p12.1d	Homo sapiens taspase, threonine aspartase, 1 (TASP1), mRNA.			Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC39159; FLJ20212; C20orf13; dJ585I14.2	C20orf13; FLJ20212; dJ585I14.2
Homo sapiens	RefSeq	NM_001042353.1	ILMN_170512	FAM110A	NM_001042353.1	NM_001042353.1		83541	108389126	NM_001042353.1	FAM110A	NP_001035812.1	ILMN_2323944	0006400402	A	1385	GGCAAGGACTGACTCTCCAAGGGTTTTGTTCTTGGCTTTGGACACCTGAG	20	+	774496-774545	20p13f	Homo sapiens family with sequence similarity 110, member A (FAM110A), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]			MGC4675; FAM110A; bA371L19.3; F10; C20orf55; MGC2450	bA371L19.3; C20orf55; MGC4675; FAM110A; F10; MGC2450
Homo sapiens	RefSeq	NM_001042353.1	ILMN_170512	FAM110A	NM_001042353.1	NM_001042353.1		83541	108389126	NM_001042353.1	FAM110A	NP_001035812.1	ILMN_2248093	0004590630	I	177	GAGCTGTCAGCCTCTCCAAAGCCTGCGCGAGAGGAGCCGGGACACGCCTA	20	+	762532-762581	20p13f	Homo sapiens family with sequence similarity 110, member A (FAM110A), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]			MGC4675; FAM110A; bA371L19.3; F10; C20orf55; MGC2450	bA371L19.3; C20orf55; MGC4675; FAM110A; F10; MGC2450
Homo sapiens	RefSeq	NM_015607.2	ILMN_21997	C1ORF77	NM_015607.2	NM_015607.2		26097	28875796	NM_015607.2	C1orf77	NP_056422.2	ILMN_1736234	0002690215	S	1027	ATGGCGCAGACAGATCCCGAAACCAATGATTGAAGCCTGCCCATCCTCCC	1	+	151884337-151884369:151884370-151884386	1q21.3d	Homo sapiens chromosome 1 open reading frame 77 (C1orf77), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	MGC86949; RP1-178F15.2; MGC131924; pp7704; DKFZP547E1010	MGC86949; RP1-178F15.2; MGC131924; pp7704; DKFZP547E1010
Homo sapiens	RefSeq	XM_372643.3	ILMN_162557	LOC390738	XM_372643.3	XM_372643.3		390738	89040499	XM_372643.3	LOC390738	XP_372643.3	ILMN_1718278	0002680379	S	181	AGCCCTGCTGATCAAGAGACAAGCACGGTGACCCAGCAGCAGTGGCACCT	16	-	70024498-70024547	16q22.3a	PREDICTED: Homo sapiens similar to transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila) (LOC390738), mRNA.					
Homo sapiens	RefSeq	XM_930765.1	ILMN_42206	LOC642383	XM_930765.1	XM_930765.1		642383	89060009	XM_930765.1	LOC642383	XP_935858.1	ILMN_1679631	0005810040	S	417	CAGATCATGGCCGCCACCAGGCTCCCGAGCCATGGCTTCCTGTCCGGGAA	X	-	114867065-114867114	Xq23d	PREDICTED: Homo sapiens hypothetical LOC642383 (LOC642383), mRNA.					
Homo sapiens	RefSeq	NM_001545.1	ILMN_11458	ICT1	NM_001545.1	NM_001545.1		3396	4557656	NM_001545.1	ICT1	NP_001536.1	ILMN_2182198	0001820189	S	595	AGACAAGCAGGAGGGTCGACATGGACTGAAATCACCCTCTGCAGCTGGGA	17	+	70528667-70528695:70528696-70528716	17q25.1c	Homo sapiens immature colon carcinoma transcript 1 (ICT1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code) [goid 6415] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [evidence IEA]	DS-1	DS-1
Homo sapiens	RefSeq	NM_001507.1	ILMN_165147	MLNR	NM_001507.1	NM_001507.1		2862	4504094	NM_001507.1	MLNR	NP_001498.1	ILMN_1742564	0004210273	S	1095	GGCCTTTAAACTGCTGCTCGCAAGGAAGTCCAGGCCGAGAGGCTTCCACA	13	+	48694370-48694419	13q14.2c	Homo sapiens motilin receptor (MLNR), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10381885] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10381885] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 10381885] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IEA]	GPR38; MTLR1	GPR38; MTLR1
Homo sapiens	RefSeq	NM_001003680.1	ILMN_21394	LEPR	NM_001003679.1	NM_001003679.1		3953	51093378	NM_001003679.1	LEPR	NP_001003679.1	ILMN_1676265	0006480348	A	2305	CACTTTCCTGTGGACAGAGCAAGCACATACTGTTACGGTTCTGGCCATCA	1	+	65854386-65854435	1p31.3b	Homo sapiens leptin receptor (LEPR), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	 [goid 6112] [pmid 9537324] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9537324] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9537324] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IEA]	 [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11279102] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OBR; CD295	OBR; CD295
Homo sapiens	RefSeq	NM_001003679.1	ILMN_21394	LEPR	NM_001003679.1	NM_001003679.1		3953	51093378	NM_001003679.1	LEPR	NP_001003679.1	ILMN_1731966	0001940196	I	3613	CCCTACATACCCAGGTCAGATTGACGGGACCAGAAGGGAACATCGACTTC	1	+	65872160-65872209	1p31.3b	Homo sapiens leptin receptor (LEPR), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	 [goid 6112] [pmid 9537324] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9537324] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9537324] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; Any process that stops or reduces the rate of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51346] [evidence IEA]	 [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11279102] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	OBR; CD295	OBR; CD295
Homo sapiens	RefSeq	NM_016730.1	ILMN_22087	FOLR1	NM_016730.1	NM_016730.1		2348	9257214	NM_016730.1	FOLR1	NP_057942.1	ILMN_1712582	0006180041	I	270	CCCAAGGCCAAGGAGAAGGTGGAGTGAGGGCTGGGGTCGGGACAGGTTGA	11	+	71579175-71579224	11q13.4a	Homo sapiens folate receptor 1 (adult) (FOLR1), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2768245] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10633085] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 9545095] [evidence TAS]; The directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 15884] [pmid 9545095] [evidence TAS]; The chemical reactions and pathways involving folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 46655] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10633085] [evidence TAS]; Interacting selectively with folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 5542] [pmid 9545095] [evidence TAS]	FBP; MOv18; FOLR; FR-alpha	FBP; MOv18; FOLR; FR-alpha
Homo sapiens	RefSeq	NM_018940.2	ILMN_162242	PCDHB7	NM_018940.2	NM_018940.2		56129	14195613	NM_018940.2	PCDHB7	NP_061763.1	ILMN_1738252	0006420593	S	3346	CTGTCCAAACTCAAGCGGAAAACAAAATTGAAAGGGCAACCTGTGCCTTC	5	+	140535772-140535821	5q31.3b	Homo sapiens protocadherin beta 7 (PCDHB7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC111391; PCDH-BETA7; MGC163205	MGC111391; PCDH-BETA7; MGC163205
Homo sapiens	RefSeq	XM_001722177.1	ILMN_336180	LOC100127974	XM_001722177.1	XM_001722177.1		100127974	169205130	XM_001722177.1	LOC100127974	XP_001722229.1	ILMN_3177974	0004290326	A	71	TGGCCCACTGACAACTAAATGTGGGGACAGGTCTCTTACAAGCCACTGGG				12p13.31d	PREDICTED: Homo sapiens hypothetical protein LOC100127974 (LOC100127974), mRNA.					
Homo sapiens	RefSeq	NM_006211.2	ILMN_9859	PENK	NM_006211.2	NM_006211.2		5179	40254835	NM_006211.2	PENK	NP_006202.1	ILMN_1726711	0006220019	S	905	GCCCCAGCAAGCCTCCCTCCATCCTCCAGTGGGAAACTGTTGATGGTGTT	8	-	57516311-57516360	8q12.1b	Homo sapiens proenkephalin (PENK), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7057924] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IEA]	Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IEA]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 7057924] [evidence TAS]		
Homo sapiens	RefSeq	XM_499300.2	ILMN_33988	TNRC18	XM_499300.3	XM_499300.3		27320	113419572	XM_499300.3	TNRC18	XP_499300.3	ILMN_1766975	0002630162	A	1774	AGCAGCGGCTCGGAGACAGAAGGGGAGGAGGAAGGCGACAAGAACGGGGA				7q11.21b	PREDICTED: Homo sapiens trinucleotide repeat containing 18 (TNRC18), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	XM_935494.1	ILMN_33988	TNRC18	XM_499300.3	XM_499300.3		27320	113419572	XM_499300.3	TNRC18	XP_499300.3	ILMN_1678329	0002190367	S	2398	ATCCGTACTGGGGACTGTGCCGTGTTCCTCTCTGCCGGCCGCCCCAACCT				7q11.21b	PREDICTED: Homo sapiens trinucleotide repeat containing 18 (TNRC18), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	NM_052880.3	ILMN_15026	PIK3IP1	NM_052880.3	NM_052880.3		113791	51317357	NM_052880.3	PIK3IP1	NP_443112.2	ILMN_1719986	0005390730	S	2154	GCTCCTAGCCATAGAGCTTCCTTTCCAGAACCCTTCCACTGCCCAATGTG	22	-	30007802-30007851	22q12.2c	Homo sapiens phosphoinositide-3-kinase interacting protein 1 (PIK3IP1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HGFL; hHGFL(S); MGC17330	HGFL; hHGFL(S); MGC17330
Homo sapiens	RefSeq	XM_938580.1	ILMN_42778	LOC649501	XM_938580.1	XM_938580.1		649501	89061517	XM_938580.1	LOC649501	XP_943673.1	ILMN_1708367	0004900450	S	356	AACCCAAAATCCCCGTGTGCCGCGTCAGGTTACAAACCAGTCTCCTTCGC					PREDICTED: Homo sapiens hypothetical protein LOC649501 (LOC649501), mRNA.					
Homo sapiens	RefSeq	XM_927235.1	ILMN_32781	LOC643985	XM_927235.1	XM_927235.1		643985	89029408	XM_927235.1	LOC643985	XP_932328.1	ILMN_1746343	0000290128	S	4038	GAAGTGTCCAACTGTGACTATAGAACTGTGGGTTTATCCTTTCAATCCTG	9	-	66229951-66230000		PREDICTED: Homo sapiens hypothetical protein LOC643985 (LOC643985), mRNA.					
Homo sapiens	RefSeq	NM_033288.2	ILMN_25147	ZNF160	NM_033288.2	NM_033288.2		90338	38788287	NM_033288.2	ZNF160	NP_150630.2	ILMN_2312149	0000360709	A	4448	CACATTCTTACACCCCAAAATCTGCATTGCCATTGATGCATATGCACCAC	19	-	58261389-58261438	19q13.41a	Homo sapiens zinc finger protein 160 (ZNF160), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 11410164] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ00032; KR18; DKFZp686B16128; KIAA1611; F11; HZF5; HKr18	FLJ00032; KR18; DKFZp686B16128; KIAA1611; F11; HZF5; HKr18
Homo sapiens	RefSeq	NM_030625.2	ILMN_15032	TET1	NM_030625.2	NM_030625.2		80312	156139121	NM_030625.2	TET1	NP_085128.2	ILMN_3247163	0005490767	S	9373	CCCCACTGTGGGAACCAAATTGGATTCCTACTTTGTTGGACTCTCTTTCC	10	+	70124034-70124083	10q21.3d-q21.3e	Homo sapiens tet oncogene 1 (TET1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ41442; KIAA1676; LCX; bA119F7.1; FLJ10839; TET1	KIAA1676; LCX; bA119F7.1; FLJ10839; TET1
Homo sapiens	RefSeq	NM_207293.1	ILMN_10238	MBNL1	NM_207296.1	NM_207296.1		4154	46411171	NM_207296.1	MBNL1	NP_997179.1	ILMN_1807304	0005220315	A	4967	ATCCAGCCTTCACTCCAGCTGGTTAAAAATGTTGCACTTATCAGCAACCC	3	+	152183310-152183359	3q25.1c-q25.2a	Homo sapiens muscleblind-like (Drosophila) (MBNL1), transcript variant 6, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10970838] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10970838] [evidence IDA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence ISS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence ISS]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence ISS]	Interacting selectively with double-stranded RNA [goid 3725] [pmid 10970838] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EXP42; KIAA0428; MBNL; EXP40; EXP; DKFZp686P06174; EXP35	EXP42; KIAA0428; MBNL; EXP40; EXP; DKFZp686P06174; EXP35
Homo sapiens	Unigene	Hs.570535	ILMN_122716	HS.570535	Hs.570535		Hs.570535		3426831	AI087798			ILMN_1914949	0005810113	S	358	GCAGCAGGGTAGAGAGAACAAACCAGACTTGGGAAAGCACAGGTGAACTC	3	+	160929185-160929234		oo20c08.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:1566734 3, mRNA sequence					
Homo sapiens	RefSeq	XM_944459.1	ILMN_137952	BCL7C	XM_944459.1	XM_944459.1		9274	89040788	XM_944459.1	BCL7C	XP_949552.1	ILMN_1788844	0000610731	I	3026	AGCAATGCAGTACCACTTCTTGTGCTGGGACACAGCGGGGTTAAGGCCGT				16p11.2c	PREDICTED: Homo sapiens B-cell CLL/lymphoma 7C, transcript variant 3 (BCL7C), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]			
Homo sapiens	Unigene	Hs.120300	ILMN_75629	HS.120300	Hs.120300		Hs.120300		58552433	CX869259			ILMN_1831943	0001300343	S	458	CTGCTTCATGGTTCTGCTGCCAGATCTTCCAAAGTCTGCTTTACTGGGCC	9	+	103368247-103368296		HESC4_33_E11.g1_A037 NIH_MGC_262 Homo sapiens cDNA clone IMAGE:7474271 5, mRNA sequence					
Homo sapiens	RefSeq	XM_938538.1	ILMN_34013	LOC391322	XM_938538.1	XM_938538.1		391322	89059225	XM_938538.1	LOC391322	XP_943631.1	ILMN_1798664	0006590162	A	252	CTGCTGGGCCATGTGGCAGAAGCTTTTTTCCGCCAGAGCTGTTTCCGTTC				22q11.23b	PREDICTED: Homo sapiens similar to D-dopachrome tautomerase (Phenylpyruvate tautomerase II) (LOC391322), mRNA.					
Homo sapiens	RefSeq	NM_001511.1	ILMN_17166	CXCL1	NM_001511.1	NM_001511.1		2919	4504152	NM_001511.1	CXCL1	NP_001502.1	ILMN_1787897	0005720039	S	792	GGCTGGCGGATCCAAGCAAATGGCCAATGAGATCATTGTGAAGGCAGGGG	4	+	74736642-74736691	4q13.3d	Homo sapiens chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) (CXCL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10881932] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10820279] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9725262] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10820279] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9551928] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9058825] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9551928] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 9725262] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10820279] [evidence TAS]; Increases the activity of an enzyme [goid 8047] [pmid 9079638] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	GROa; FSP; GRO1; MGSA alpha; NAP-3; MGSA-a; MGSA; SCYB1	GROa; FSP; GRO1; MGSA alpha; NAP-3; MGSA-a; MGSA; SCYB1
Homo sapiens	RefSeq	NM_177436.1	ILMN_5554	CSE1L	NM_177436.1	NM_177436.1		1434	29029560	NM_177436.1	CSE1L	NP_803185.1	ILMN_1762275	0004920139	I	1696	GGGGTTTGTATTGGCGCACCAAGATCTCCAACAGCCAGTGTGTGTTTCCC	20	+	47146232-47146281	20q13.13c	Homo sapiens CSE1 chromosome segregation 1-like (yeast) (CSE1L), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9323134] [evidence TAS]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9323134] [evidence TAS]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 7479798] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7479798] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17719542] [evidence IPI]; Interacting selectively with importin-alpha to mediate its transfer through the nuclear pore to the cytoplasm [goid 8262] [pmid 9323134] [evidence TAS]	XPO2; CSE1; CAS; MGC117283; MGC130036; MGC130037	XPO2; CSE1; CAS; MGC117283; MGC130036; MGC130037
Homo sapiens	RefSeq	NM_006208.1	ILMN_12347	ENPP1	NM_006208.1	NM_006208.1		5167	13324676	NM_006208.1	ENPP1	NP_006199.1	ILMN_1700888	0003420553	S	3024	GTTCGGGGGAATAAAGACAGACCACACCTAAAACTGCCTTTCTGCTTCTC	6	+	132253574-132253623	6q23.2a	Homo sapiens ectonucleotide pyrophosphatase/phosphodiesterase 1 (ENPP1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11159191] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10513816] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8001561] [evidence EXP]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 10513816] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1315502] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 9553761] [evidence NAS]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 12746903] [evidence IDA]; The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 10513816] [evidence IDA]; The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 11159191] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a nucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with triphosphate on its glycose moiety [goid 9143] [pmid 10513816] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 17849011] [evidence IDA]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [pmid 10513816] [evidence IC ]; The directed movement of inorganic diphosphate into, out of, within or between cells [goid 30505] [pmid 10513816] [evidence IDA]; The regulation of the levels, transport, and metabolism of phosphate ions within a cell or between a cell and its external environment [goid 30643] [pmid 11159191] [evidence IDA]; The process of binding or confining any triester of glycerol such that it is separated from other components of a biological system [goid 30730] [pmid 17849011] [evidence IDA]; Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues [goid 31953] [pmid 11289049] [evidence IDA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [pmid 17849011] [evidence IDA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [pmid 7830796] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of adipocyte differentiation [goid 45599] [pmid 17849011] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glycogen [goid 45719] [pmid 11289049] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46325] [pmid 17849011] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of insulin receptor signaling [goid 46627] [pmid 17849011] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of insulin receptor signaling [goid 46627] [pmid 7830796] [evidence IDA]; The chemical reactions and pathways involving 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems [goid 50427] [pmid 7830796] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [evidence IEA]; Catalysis of the reaction: a dinucleotide + H2O = 2 mononucleotides [goid 4551] [pmid 8001561] [evidence EXP]; Interacting selectively with the insulin receptor [goid 5158] [pmid 7830796] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11289049] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 7830796] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 7830796] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: H2O + a nucleoside triphosphate = pyrophosphate + a nucleotide [goid 47429] [pmid 10513816] [evidence IDA]; Catalysis of the reaction: H2O + a nucleoside triphosphate = pyrophosphate + a nucleotide [goid 47429] [pmid 11159191] [evidence IDA]; Catalysis of the reaction: H2O + a nucleoside triphosphate = pyrophosphate + a nucleotide [goid 47429] [pmid 7830796] [evidence IDA]; Interacting selectively with 3'-phosphoadenosine 5'-phosphosulfate (PAPS), a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems [goid 50656] [pmid 7830796] [evidence IC ]	PCA1; PDNP1; M6S1; NPPS; PC-1; NPP1	PCA1; PDNP1; M6S1; NPPS; PC-1; NPP1
Homo sapiens	RefSeq	NM_006224.2	ILMN_9873	PITPNA	NM_006224.2	NM_006224.2		5306	31377785	NM_006224.2	PITPNA	NP_006215.1	ILMN_1715804	0006590243	S	3284	TGCTTCCATCAGAATTCCAGGGTCACAGCCCCAACAGAAGCAGCAGTGCC	17	-	1368315-1368364	17p13.3e	Homo sapiens phosphatidylinositol transfer protein, alpha (PITPNA), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8194769] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 7914867] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of phosphatidylcholine into, out of, within or between cells. Phosphatidylcholine refers to a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 8525] [pmid 8194769] [evidence TAS]; Enables the directed movement of phosphatidylinositol into, out of, within or between cells. Phosphatidylinositol refers to any glycophospholipids with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 8526] [pmid 8194769] [evidence TAS]	PITPN; VIB1A; MGC99649	PITPN; VIB1A; MGC99649
Homo sapiens	RefSeq	NM_001008224.1	ILMN_29424	UACA	NM_001008224.1	NM_001008224.1		55075	56550046	NM_001008224.1	UACA	NP_001008225.1	ILMN_1758209	0004050670	I	11	AGCAGGATGCAGAGTGCTGTTCAAGTTTTCCAGTGGGGTCCCTCAAAGGG	15	-	70994560-70994609	15q23b	Homo sapiens uveal autoantigen with coiled-coil domains and ankyrin repeats (UACA), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11162650] [evidence NAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A multisubunit protein complex involved in the activation of apoptosis. In mammals it is typically composed of seven Apaf-1 subunits bound to cytochrome c and caspase-9. A similar complex to promote apoptosis is formed from homologous gene products in other eukaryotic organisms [goid 43293] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IEA]	A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IEA]; The activation, by oxidative stress, of any of the steps required for cell death by apoptosis [goid 8631] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IEA]; The process by which a virus reproduces. Usually, this is by infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle [goid 16032] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of movement of proteins from the cytoplasm into the nucleus [goid 42307] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the transfer of NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters, from the cytoplasm into the nucleus, across the nuclear membrane [goid 42347] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43280] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC141967; FLJ10128; NUCLING; MGC141969; KIAA1561	MGC141967; FLJ10128; NUCLING; MGC141969; KIAA1561
Homo sapiens	RefSeq	NM_031232.2	ILMN_30350	NECAB3	NM_031231.3	NM_031231.3		63941	149158724	NM_031231.3	NECAB3	NP_112508.3	ILMN_1749738	0000050521	A	1606	AAGCAGGGCTGATGCTCAGGGACCCCCCAACCCTCAAACCTTGCCTCCGA	20	-	32245174-32245223	20q11.22a	Homo sapiens N-terminal EF-hand calcium binding protein 3 (NECAB3), transcript variant 1, mRNA.	The Golgi cisterna closest to the endoplasmic reticulum; the first processing compartment through which proteins pass after export from the ER [goid 137] [evidence ISS]; The Golgi cisterna closest to the endoplasmic reticulum; the first processing compartment through which proteins pass after export from the ER [goid 137] [pmid 10833507] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10833507] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10833507] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10833507] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]	The regulated release of proteins from a cell or group of cells [goid 9306] [pmid 12780348] [evidence NAS]; The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms [goid 17000] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [pmid 12780348] [evidence IDA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence ISS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of beta-amyloid [goid 42984] [pmid 10833507] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10833507] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10833507] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	SYTIP2; dJ63M2.4; XB51; NIP1; EFCBP3; STIP3; NECAB3; dJ63M2.5; APBA2BP	SYTIP2; dJ63M2.4; XB51; NIP1; EFCBP3; NECAB3; dJ63M2.5
Homo sapiens	RefSeq	NM_021627.2	ILMN_173085	SENP2	NM_021627.2	NM_021627.2		59343	54607090	NM_021627.2	SENP2	NP_067640.2	ILMN_2123567	0006480278	S	2799	CAGATCTGGTTGAGTATAAACCTCAGAATTGTAGGGGCTGGCCTGAGCTG	3	+	185348490-185348539	3q27.2b	Homo sapiens SUMO1/sentrin/SMT3 specific peptidase 2 (SENP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 12192048] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [pmid 11896061] [evidence NAS]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11896061] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the hydrolysis of SUMO, a small ubiquitin-related modifier, from previously sumoylated substrates [goid 16929] [pmid 11896061] [evidence IDA]	AXAM2; SMT3IP2; KIAA1331; DKFZp762A2316	AXAM2; SMT3IP2; KIAA1331; DKFZp762A2316
Homo sapiens	RefSeq	NM_004662.1	ILMN_30238	DNAH9	NM_004662.1	NM_004662.1		1770	4758175	NM_004662.1	DNAH9	NP_004653.1	ILMN_1813799	0002650372	I	174	CCAGCACCCCACTCCAGCCTCGAGGAAGCTTTTACACAGTCTGCCATGGT	17	+	11727117-11727166	17p12d	Homo sapiens dynein, axonemal, heavy polypeptide 9 (DNAH9), transcript variant 1, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 8812413] [evidence TAS]; A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35085] [pmid 11104725] [evidence IDA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 8812413] [evidence TAS]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8703119] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]	HL20; HL-20; Dnahc9; KIAA0357; DNAH17L; DNEL1; DYH9	HL20; HL-20; Dnahc9; KIAA0357; DNAH17L; DNEL1; DYH9
Homo sapiens	RefSeq	NM_004723.2	ILMN_21181	ARHGEF2	NM_004723.2	NM_004723.2		9181	15011973	NM_004723.2	ARHGEF2	NP_004714.2	ILMN_1703477	0004120411	S	3950	TGGGGGATTTTTCAGTGGAACCCTTGCCCCCAAATGTCGACCAGCCCCCA	1	-	154183346-154183395	1q22c	Homo sapiens rho/rac guanine nucleotide exchange factor (GEF) 2 (ARHGEF2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence ISS]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [evidence ISS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9857026] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 9857026] [evidence TAS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 30676] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [evidence ISS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P40; GEF; LFP40; DKFZp547L106; GEF-H1; DKFZp547P1516; GEFH1; KIAA0651	P40; GEF; LFP40; DKFZp547L106; GEF-H1; DKFZp547P1516; GEFH1; KIAA0651
Homo sapiens	RefSeq	NM_017789.3	ILMN_581	SEMA4C	NM_017789.3	NM_017789.3		54910	40804743	NM_017789.3	SEMA4C	NP_060259.3	ILMN_2115669	0007050328	S	3347	AAAGGCTGTGTGAGGGGAGAGAAGGGAGAGGGTGGGCCTGCTGTGGACAA	2	-	96889328-96889377	2q11.2a	Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C (SEMA4C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Semacl1; MGC126383; SEMAI; MGC126382; Semaf; M-SEMA-F; M-Sema F; KIAA1739; FLJ20369	Semacl1; MGC126383; SEMAI; MGC126382; Semaf; M-SEMA-F; M-Sema F; KIAA1739; FLJ20369
Homo sapiens	RefSeq	NM_032107.2	ILMN_22292	L3MBTL	NM_032107.2	NM_032107.2		26013	21536480	NM_032107.2	L3MBTL	NP_115479.2	ILMN_1774258	0000630132	A	2546	GTGCTCAGATCATCTTCAGGAAGGAAAAGGCATCCTGGAGACAGGAGTCC	20	+	41603139-41603188	20q13.11b-q13.12a	Homo sapiens l(3)mbt-like (Drosophila) (L3MBTL), transcript variant II, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17540172] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	L3MBTL1; dJ138B7.3; DKFZp586P1522; KIAA0681; H-L(3)MBT	L3MBTL1; dJ138B7.3; DKFZp586P1522; KIAA0681; H-L(3)MBT
Homo sapiens	RefSeq	NM_005408.2	ILMN_16434	CCL13	NM_005408.2	NM_005408.2		6357	22538799	NM_005408.2	CCL13	NP_005399.1	ILMN_1783593	0001230605	S	647	GAGCTGCTGGCAGTGGGTTTGTATTCGGTTCCCAGGGGTTGAGAGCATGC	17	+	29709538-29709587	17q12a	Homo sapiens chemokine (C-C motif) ligand 13 (CCL13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9195948] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 9195948] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 9195948] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9195948] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9558100] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9195948] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9195948] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9558100] [evidence NAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 9558100] [evidence TAS]	MGC17134; SCYA13; CKb10; MCP-4; NCC-1; SCYL1; NCC1	MGC17134; SCYA13; CKb10; MCP-4; NCC-1; SCYL1; NCC1
Homo sapiens	Unigene	Hs.544140	ILMN_107610	HS.544140	Hs.544140		Hs.544140		6085771	AW117187			ILMN_1853210	0003140600	S	267	CCATGGTGCCTCAAGGGAGACACAGCAAAGGGACCCCAAAGCAATGACAC	5	+	50346963-50347012		xd83f04.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2604223 3, mRNA sequence					
Homo sapiens	RefSeq	NM_178351.3	ILMN_678	LCE1C	NM_178351.3	NM_178351.3		353133	57242768	NM_178351.3	LCE1C	NP_848128.1	ILMN_3236932	0000580253	S	433	AGAATCCAGGACCGCAAACTGCCAAGGACATCCCCCTTCTCCTACTAGGC	1	-	152777523-152777572	1q21.3b	Homo sapiens late cornified envelope 1C (LCE1C), mRNA.		The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		LEP3	LEP3
Homo sapiens	RefSeq	XM_928786.1	ILMN_45201	LOC653669	XM_928786.1	XM_928786.1		653669	89027852	XM_928786.1	LOC653669	XP_933879.1	ILMN_1658346	0005860382	S	11	AAGTCCTCTCACCAGAATTGAGGAATGTCAAGGCTGGAAGCAGCCCCAGC	8	+	7731075-7731114:7731404-7731413		PREDICTED: Homo sapiens similar to defensin, beta 104A (LOC653669), mRNA.					
Homo sapiens	RefSeq	NM_152783.3	ILMN_18076	D2HGDH	NM_152783.3	NM_152783.3		728294	119964727	NM_152783.3	D2HGDH	NP_689996.4	ILMN_2206272	0002710129	S	2387	GTGCTCTGAGTTTCGGGTTCTGCTCCTACAAAGAACGTGCGGTGCTGCGG	2	+	242356705-242356754	2q37.3g	Homo sapiens D-2-hydroxyglutarate dehydrogenase (D2HGDH), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15070399] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus [goid 10042] [pmid 15070399] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [pmid 15070399] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion stimulus [goid 32025] [pmid 15070399] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus [goid 32026] [pmid 15070399] [evidence ISS]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [pmid 15070399] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [pmid 15070399] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of the reaction: (R)-2-hydroxyglutarate + acceptor = 2-oxoglutarate + reduced acceptor [goid 51990] [pmid 15070399] [evidence ISS]	FLJ42195; MGC25181; D2HGD	FLJ42195; D2HGD
Homo sapiens	RefSeq	XM_001130913.2	ILMN_166098	LOC728531	XM_001130913.2	XM_001130913.2		728531	169162746	XM_001130913.2	LOC728531	XP_001130913.1	ILMN_3232551	0000870075	I	470	GAGCTGCAACACCTCAACAGCAACGAGCACACCTGCTACCTAGAACTTGG	1	+	222261642-222261691	1q42.11a	PREDICTED: Homo sapiens hypothetical LOC728531, transcript variant 1 (LOC728531), mRNA.					
Homo sapiens	RefSeq	NM_006817.2	ILMN_136946	C12ORF8	NM_006817.2	NM_006817.2		10961	13124889	NM_006817.2	C12orf8	NP_006808.1	ILMN_1696035	0005050592	S	683	CGCCAGGCTGATTGAGAAGAACAAGATGAGTGACGGCAAGAAGGAGGAGC	12	+	110944728-110944777	12q24.13a	Homo sapiens chromosome 12 open reading frame 8 (C12orf8), mRNA.				PDI-DB; ERp31; ERp28; ERp29	PDI-DB; ERp31; ERp28; ERp29
Homo sapiens	RefSeq	XM_930292.1	ILMN_31422	LOC647246	XM_930292.1	XM_930292.1		647246	88943674	XM_930292.1	LOC647246	XP_935385.1	ILMN_1663096	0003130274	S	121	TCAGTCTAAGAGAAGGGCCATCTTCCAGCCCTGCTGTCCCTGCCTGTCAT	1	+	201274427-201274476		PREDICTED: Homo sapiens similar to PTPRF interacting protein alpha 2 (LOC647246), mRNA.					
Homo sapiens	RefSeq	NM_178520.2	ILMN_166481	TMEM105	NM_178520.2	NM_178520.2		284186	31341830	NM_178520.2	TMEM105	NP_848615.1	ILMN_1783973	0003360601	S	3257	GTGGCCTGGGTTTGGAGCTCAGCACCCTGCGGGAATTCTATTAAATCTCC	17	-	79285084-79285133	17q25.3f	Homo sapiens transmembrane protein 105 (TMEM105), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ38792	FLJ38792
Homo sapiens	RefSeq	XR_015877.2	ILMN_181076	LOC728850	XR_015877.2	XR_015877.2		728850	169211153	XR_015877.2	LOC728850		ILMN_3236192	0000940112	S	1878	TCAGAGACAGGACTCTGGTTTTAAATCCTCCCCGCGCCTGGTGCTGGCGA	17	+	14419-14468		PREDICTED: Homo sapiens misc_RNA (LOC728850), miscRNA.					
Homo sapiens	RefSeq	NM_004818.2	ILMN_162862	DDX23	NM_004818.2	NM_004818.2		9416	41327770	NM_004818.2	DDX23	NP_004809.2	ILMN_1784218	0005090450	S	2861	ATTGCTCCCCAGACTGAACAGAAACCTGGCCGCCGGATGGGACCTCCTTT	12	-	49223895-49223944	12q13.12a	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (DDX23), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9409622] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [pmid 9539711] [evidence IDA]	Assembly of a spliceosomal complex containing the intact pre-mRNA and all of the spliceosomal snRNPs. This occurs when the tri-snRNP associates with the pre-mRNA and associated snRNPs in an ATP-dependent manner [goid 354] [pmid 9539711] [evidence IC ]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9409622] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 9409622] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9774689] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9409622] [evidence TAS]	U5-100K; prp28; PRPF28; MGC8416	U5-100K; prp28; PRPF28; MGC8416
Homo sapiens	RefSeq	NM_024887.2	ILMN_11786	DHDDS	NM_205861.1	NM_205861.1		79947	45580737	NM_205861.1	DHDDS	NP_995583.1	ILMN_1789535	0003440403	A	3025	GAGAAGCTGCCCCAGGAGGCGATGTAGTGGTGGAAAGAAGAGGCAGAGAG	1	+	26670111-26670160	1p36.11b	Homo sapiens dehydrodolichyl diphosphate synthase (DHDDS), transcript variant 2, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15110773] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HDS; DS; CIT; CPT; FLJ13102	HDS; DS; CIT; CPT; FLJ13102
Homo sapiens	RefSeq	XM_001721038.1	ILMN_335378	LOC100129291	XM_001721038.1	XM_001721038.1		100129291	169216278	XM_001721038.1	LOC100129291	XP_001721090.1	ILMN_3177042	0003440609	A	292	GGCCCAACTTCCCACACACCGGCCAGGACTGCCTCGCCTATCCACGCATC				Xq13.1d	PREDICTED: Homo sapiens hypothetical protein LOC100129291 (LOC100129291), mRNA.					
Homo sapiens	RefSeq	NM_174925.1	ILMN_166816	LOC205251	XR_017711.1	XR_017711.1		205251	113413966	XR_017711.1	LOC205251		ILMN_1693685	0004180431	S	524	AACCGACTGCGGAGGCGCTACTTGGACTGGAGGAAAAGGAGGCTGCAGGA				2q13b	PREDICTED: Homo sapiens misc_RNA (LOC205251), miscRNA.					
Homo sapiens	RefSeq	NM_139155.2	ILMN_176528	ADAMTS14	NM_139155.2	NM_139155.2		140766	110611166	NM_139155.2	ADAMTS14	NP_631894.2	ILMN_2358134	0007610372	A	5043	CTGGAGGAACATGAGTAGTGGGCCCCTGGCCTGCAACCCCTTTGGAGAGT	10	+	72191977-72192026	10q22.1b	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 14 (ADAMTS14), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ32820	FLJ32820
Homo sapiens	RefSeq	NM_005228.3	ILMN_164647	EGFR	NM_005228.3	NM_005228.3		1956	41327737	NM_005228.3	EGFR	NP_005219.2	ILMN_1798975	0001050671	I	5296	TAGGAGCCCACCTTTTTTCCTAATCTGTGTGTGCCCTGTAACCTGACTGG	7	+	55235578-55235600:55236375-55236401	7p11.2c	Homo sapiens epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) (EGFR), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9103388] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12828935] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12435727] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 14702346] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8845374] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8493579] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15475003] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10567358] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10648629] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10734310] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10913131] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11823423] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11894095] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12218189] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12593796] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14560030] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14665621] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15574420] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16407834] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8639530] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9356464] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15465819] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9544989] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles [goid 30122] [pmid 14702346] [evidence TAS]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 12925580] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 12828935] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7736574] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 12435727] [evidence IDA]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 12435727] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 12435727] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 12435727] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 15082764] [evidence IDA]; A series of molecular signals that leads to the upregulation of calcium-dependent phospholipase A2 activity in response to the signal [goid 43006] [pmid 12435727] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [pmid 10572067] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [pmid 12828935] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 10572067] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IEA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [pmid 12435727] [evidence IMP]; Any process that modulates the activity of the enzyme nitric-oxide synthase [goid 50999] [pmid 12828935] [evidence IDA]; The process by which a protein is incorporated into a biological membrane [goid 51205] [pmid 12435727] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 6325948] [evidence NAS];  [goid 4710] [pmid 15542601] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7736574] [evidence IDA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [evidence IEA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 12435727] [evidence IDA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 6325948] [evidence NAS]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 2790960] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Modulates the activity of nitric oxide synthase [goid 30235] [pmid 12828935] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16777603] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10572067] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 14702346] [evidence IDA]	ERBB1; ERBB; mENA	ERBB1; HER1; ERBB; mENA; PIG61
Homo sapiens	RefSeq	XM_936222.2	ILMN_45427	LOC653877	XM_936222.2	XM_936222.2		653877	113424002	XM_936222.2	LOC653877	XP_941315.1	ILMN_3237414	0005960593	S	8547	GCTAGTCTGAAATTACAGCAGGTTGTCTGGGGTAGGGGGGAGGCGTTTTT					PREDICTED: Homo sapiens similar to Temporarily Assigned Gene name family member (tag-184) (LOC653877), mRNA.					
Homo sapiens	RefSeq	NR_024438.2	ILMN_370160	LOC648740	NR_024438.2	NR_024438.2		648740	219802466	NR_024438.2	LOC648740		ILMN_3236904	0002690747	S	1549	AACGTACTTGTGGAAGACAAGTCTGGCTTGGTGAGTCTGCATGGCCAGCA	1	+	104113574-104113623		Homo sapiens ACTB pseudogene (LOC648740), non-coding RNA.					
Homo sapiens	RefSeq	NM_182614.2	ILMN_162480	FAM70B	NM_182614.2	NM_182614.2		348013	34222380	NM_182614.2	FAM70B	NP_872420.1	ILMN_2343273	0001580706	A	980	GGGAGAAGCCACCCCCCTACGCACCCTGATAGAGGCGTGGAGTAAAAGAT	13	-	114462217-114462242:114462243-114462266	13q34d	Homo sapiens family with sequence similarity 70, member B (FAM70B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP11-199F6.1; MGC20579	RP11-199F6.1; MGC20579
Homo sapiens	RefSeq	XM_294261.4	ILMN_177632	LOC648398	XR_018506.1	XR_018506.1		648398	113419336	XR_018506.1	LOC648398		ILMN_1664989	0004670079	S	1040	AGGAGCAAATCCGACAGTGGTTTATCGAGTGCCATGACCTTACTGGCCGG					PREDICTED: Homo sapiens similar to IQ motif containing with AAA domain (LOC648398), mRNA.					
Homo sapiens	RefSeq	NM_032810.2	ILMN_175726	ATAD1	NM_032810.2	NM_032810.2		84896	31377643	NM_032810.2	ATAD1	NP_116199.2	ILMN_2169983	0005340551	S	2637	CCAGAATTCTGTTATAGGCACCTAACCACGCAGCATGAGGAAAACGGCAC	10	-	89514432-89514443:89514444-89514481	10q23.2b	Homo sapiens ATPase family, AAA domain containing 1 (ATAD1), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	AFDC1; FNP001; FLJ14600	AFDC1; FNP001; FLJ14600
Homo sapiens	RefSeq	NM_032810.2	ILMN_175726	ATAD1	NM_032810.2	NM_032810.2		84896	31377643	NM_032810.2	ATAD1	NP_116199.2	ILMN_1654497	0005260221	S	2167	GCATTGAATGGTTGTTAGGCAGCCATGTGCTCAACACTGATTTCACCTCT	10	-	89526120-89526164:89527430-89527434	10q23.2b	Homo sapiens ATPase family, AAA domain containing 1 (ATAD1), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	AFDC1; FNP001; FLJ14600	AFDC1; FNP001; FLJ14600
Homo sapiens	RefSeq	XM_001725589.1	ILMN_345805	LOC100130413	XM_001725589.1	XM_001725589.1		100130413	169204889	XM_001725589.1	LOC100130413	XP_001725641.1	ILMN_3265391	0006060204	M	524	CAAGTACTGTGGACACTAGCCAGGTATATATGCAGAGGCTGCAGGAGGCA					PREDICTED: Homo sapiens hypothetical protein LOC100130413 (LOC100130413), mRNA.					
Homo sapiens	RefSeq	NM_016648.1	ILMN_9254	LARP7	NM_016648.2	NM_016648.2		51574	109809740	NM_016648.2	LARP7	NP_057732.2	ILMN_1756104	0006450450	S	1575	GCCAACAGGGAAGAGTGTCGCACCCAGGAGAAAGTTAATGCAACAGGACC	4	+	113571619-113571668	4q25f	Homo sapiens La ribonucleoprotein domain family, member 7 (LARP7), transcript variant 1, mRNA.				MGC104360; DKFZP564K112; HDCMA18P	DKFZP564K112
Homo sapiens	RefSeq	NM_207311.1	ILMN_775	CCDC64	NM_207311.1	NM_207311.1		92558	46409267	NM_207311.1	CCDC64	NP_997194.1	ILMN_1653102	0005310753	S	1297	TGACTCCTTAGAAGAACAGATAAGGCAGACCAGTGAGGACTCGAGAGCCC	12	+	118996650-118996699	12q24.23c	Homo sapiens coiled-coil domain containing 64 (CCDC64), mRNA.				H_267D11.1; FLJ26450	H_267D11.1; FLJ26450
Homo sapiens	Unigene	Hs.551324	ILMN_110589	HS.551324	Hs.551324		Hs.551324		7456587	AW664047			ILMN_1833142	0004570544	S	161	CCAGGTGCTCAGATGGCTGTGGTTGTCAGGAGGAGACAGAGTGGGGTGTA	13	-	109259001-109259050		hi78a04.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2978382 3, mRNA sequence					
Homo sapiens	Unigene	Hs.554391	ILMN_111925	HS.554391	Hs.554391		Hs.554391		19027654	BM714396			ILMN_1817076	0005090280	S	111	GACTCTGAGAGTTGTCATAGAATTGCAACCGTAGGTTGGCCAAAACCATC	10	-	55233336-55233385		UI-E-EJ0-ahr-i-02-0-UI.r1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahr-i-02-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_145249.1	ILMN_18945	FAM14B	NM_145249.1	NM_145249.1		122509	21699069	NM_145249.1	FAM14B	NP_660292.1	ILMN_1709626	0005080110	A	461	GACATCTAAAGTTATCGGGGGCTTTGCTGGGACAGCTCTTGGGGCCTGGC	14	+	93638595-93638644	14q32.13a	Homo sapiens family with sequence similarity 14, member B (FAM14B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NR_029603.1	ILMN_388161	MIR139	NR_029603.1	NR_029603.1		406931	262206187	NR_029603.1	MIR139		ILMN_3309644	0001410224	S	1	TGTATTCTACAGTGCACGTGTCTCCAGTGTGGCTCGGAGGCTGGAGACGC				11q13.4a	Homo sapiens microRNA 139 (MIR139), microRNA.					
Homo sapiens	RefSeq	NM_003301.1	ILMN_16325	TRHR	NM_003301.2	NM_003301.2		7201	142362270	NM_003301.2	TRHR	NP_003292.1	ILMN_1719393	0000060736	S	799	AGGAAGCAGGTCACCAAGATGCTGGCAGTGGTTGTAATTCTGTTTGCCCT	8	+	110169698-110169706:110200453-110200493	8q23.1d	Homo sapiens thyrotropin-releasing hormone receptor (TRHR), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8395824] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8395824] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4997] [pmid 8395824] [evidence TAS]	MGC141920	
Homo sapiens	RefSeq	NM_024299.2	ILMN_21879	PPDPF	NM_024299.2	NM_024299.2		79144	34147371	NM_024299.2	PPDPF	NP_077275.1	ILMN_1720430	0004590403	S	313	TCTTTTTCGGGAAGTCCACCCTCCCGTTCATGGCCACGGTGTTGGAGTCC	20	+	61623504-61623553	20q13.33e	Homo sapiens pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) (PPDPF), mRNA.				dJ697K14.9; FLJ21046; MGC2479	dJ697K14.9; FLJ21046; MGC2479
Homo sapiens	RefSeq	NM_016099.2	ILMN_30279	GOLGA7	NM_016099.2	NM_016099.2		51125	50541949	NM_016099.2	GOLGA7	NP_057183.2	ILMN_2268921	0002100037	I	5	CGTAAGTGACGGCGAAGGCGGTGCGACAGCAGCTGGAGGGCAGAGGAGGC	8	+	41348085-41348134	8p11.21b	Homo sapiens golgi autoantigen, golgin subfamily a, 7 (GOLGA7), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			MGC4876; GOLGA3AP1; GCP16; MGC21096; HSPC041	MGC4876; GOLGA3AP1; GCP16; MGC21096; HSPC041
Homo sapiens	RefSeq	NM_080431.3	ILMN_137382	ARPM2	NM_080431.3	NM_080431.3		140625	29893807	NM_080431.3	ARPM2	NP_536356.3	ILMN_1776442	0002600754	S	1168	CCATCAAGATCACGGCTCCCCCCGACCGGTGGTTCTCCACCTGGATTGGA	1	+	2929093-2929142	1p36.32c	Homo sapiens actin-related protein M2 (ARPM2), mRNA.				ACTRT2; ARPT2; FLJ25424; HARPM2	ACTRT2; ARPT2; FLJ25424; HARPM2
Homo sapiens	RefSeq	NM_002874.3	ILMN_19346	RAD23B	NM_002874.3	NM_002874.3		5887	51173731	NM_002874.3	RAD23B	NP_002865.1	ILMN_1722662	0006590725	S	3738	GCTCAGGCCAAGTTTTGATCGTTCCATACAGTACCTTGTTTATCTGCTTC	9	+	109133899-109133948	9q31.2b	Homo sapiens RAD23 homolog B (S. cerevisiae) (RAD23B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8168482] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 8168482] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15358861] [evidence IPI]	HHR23B; HR23B; P58	HHR23B; HR23B; P58
Homo sapiens	RefSeq	XM_001722692.1	ILMN_337775	LOC100131825	XM_001722692.1	XM_001722692.1		100131825	169162288	XM_001722692.1	LOC100131825	XP_001722744.1	ILMN_3202521	0004570010	A	368	GGAGTGGGAATCACCCATCCAGACATTCTGATCCCAAGAACTCAGACCTC				1q23.2a	PREDICTED: Homo sapiens hypothetical protein LOC100131825 (LOC100131825), mRNA.					
Homo sapiens	Unigene	Hs.481464	ILMN_95822	HS.481464	Hs.481464		Hs.481464		10434986	AK023178			ILMN_1836218	0002760068	S	2481	TCCGGACAGGGAGGGCCCATCACCGAAATCCTGAATGATTACTAGACCAA	5	-	523647-523696		Homo sapiens cDNA FLJ13116 fis, clone NT2RP3002659					
Homo sapiens	RefSeq	NM_018235.1	ILMN_4139	CNDP2	NM_018235.1	NM_018235.1		55748	8922698	NM_018235.1	CNDP2	NP_060705.1	ILMN_1726769	0003390017	S	2458	GAGGAAAGAAATTAGGGCCTCCTCTGATCTCTCGCTATCTGCGGGTCCTG	18	+	70339151-70339200	18q22.3d	Homo sapiens CNDP dipeptidase 2 (metallopeptidase M20 family) (CNDP2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	FLJ10830; CPGL; CN2; PEPA; HsT2298	FLJ10830; CPGL; CN2; PEPA; HsT2298
Homo sapiens	RefSeq	XR_019614.2	ILMN_183172	LOC648279	XR_019614.2	XR_019614.2		648279	169205244	XR_019614.2	LOC648279		ILMN_3284053	0007210343	M	108	GCAAACCACAGCTCTCAATAAGCGAGTAGAAGCCACGAAGCAGTATCAGA				12q13.12c	PREDICTED: Homo sapiens misc_RNA (LOC648279), miscRNA.					
Homo sapiens	RefSeq	XM_001725977.1	ILMN_340072	LOC100133181	XM_001725977.1	XM_001725977.1		100133181	169165212	XM_001725977.1	LOC100133181	XP_001726029.1	ILMN_3239662	0004230170	S	2196	AAGACCCGTTGGACGCTCCTCGGGAGGTGAGCTGAGGGGGTAAAGAAGAA	3	+	157875849-157875878:157875879-157875898	3q25.31b	PREDICTED: Homo sapiens hypothetical protein LOC100133181 (LOC100133181), mRNA.					
Homo sapiens	RefSeq	NM_153689.5	ILMN_363952	C2ORF69	NM_153689.5	NM_153689.5		205327	205360988	NM_153689.5	C2orf69	NP_710156.3	ILMN_3236377	0006560356	S	1979	TCCAGCTACTCAGGAGGCTAAGGCAGGAGGATTGCTTGAGCCCAGGCTGT	2	+	200791247-200791296	2q33.1d	Homo sapiens chromosome 2 open reading frame 69 (C2orf69), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	RefSeq	NM_006025.2	ILMN_3030	P11	NM_006025.2	NM_006025.2		8909	22209002	NM_006025.2	P11	NP_006016.1	ILMN_2095908	0005690747	S	1888	TGCTGAATGGAGAAGGGTAATAGGTTGGTGCAGTGAATGGGCTGGGGGTG	12	-	48103911-48103960	12q13.11b	Homo sapiens 26 serine protease (P11), mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PRSS26; PP11; MGC133268	PRSS26; PP11; MGC133268
Homo sapiens	RefSeq	NM_172128.1	ILMN_12473	CAMK2D	NM_172128.1	NM_172128.1		817	26667188	NM_172128.1	CAMK2D	NP_742126.1	ILMN_2319544	0003420471	A	1292	CCTCAGAGGCACTGAAGCACCCATGGATCTGTCAACGTTCTACTGTTGCT	4	-	114654500-114654518:114655674-114655704	4q26a	Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II delta (CAMK2D), transcript variant 2, mRNA.	An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [pmid 11264466] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 9060999] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC44911; CAMKD	MGC44911; CAMKD
Homo sapiens	RefSeq	NM_005819.4	ILMN_180926	STX6	NM_005819.4	NM_005819.4		10228	58294156	NM_005819.4	STX6	NP_005810.1	ILMN_2157951	0002480487	S	4297	GGCTTTTCAATTCTGTGGACTTTGTACCATTTGGCTTCACCTTGTACTGC	1	-	180942364-180942413	1q25.3a	Homo sapiens syntaxin 6 (STX6), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 10506127] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9697774] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes [goid 30136] [pmid 9697774] [evidence TAS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 10506127] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [pmid 10506127] [evidence IPI]; The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles [goid 48193] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]		
Homo sapiens	RefSeq	NM_005819.4	ILMN_180926	STX6	NM_005819.4	NM_005819.4		10228	58294156	NM_005819.4	STX6	NP_005810.1	ILMN_1777915	0004050161	S	4032	GGTCTGGTAGCCAACAACTTGGCAACTTCCACTCCTTCTCACCTCGTGAG	1	-	180942629-180942678	1q25.3a	Homo sapiens syntaxin 6 (STX6), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 10506127] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9697774] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes [goid 30136] [pmid 9697774] [evidence TAS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 10506127] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [pmid 10506127] [evidence IPI]; The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles [goid 48193] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]		
Homo sapiens	RefSeq	NR_002473.1	ILMN_25996	LOC613037	NR_002555.2	NR_002555.2		613037	83415186	NR_002555.2	LOC613037		ILMN_1696843	0002760189	S	1833	CCCTTCCACCCTCAGCTCCACTCTCAGCAGATGATAATATCAAGATACCT	16	-	30235922-30235971	16p11.2d	Homo sapiens nuclear pore complex interacting protein pseudogene (LOC613037), non-coding RNA.					
Homo sapiens	RefSeq	NR_002555.2	ILMN_25996	LOC613037	NR_002555.2	NR_002555.2		613037	83415186	NR_002555.2	LOC613037		ILMN_2070052	0004180563	S	3255	AAACCCAAGAGGCGGAGGGTCGGTGATGTGGAACCGTCACGCAAACCCAA	16	-	30234500-30234549	16p11.2d	Homo sapiens nuclear pore complex interacting protein pseudogene (LOC613037), non-coding RNA.					
Homo sapiens	RefSeq	NR_002577.1	ILMN_6612	DEFB122	NR_002577.1	NR_002577.1		245935	77735357	NR_002577.1	DEFB122		ILMN_2197228	0004780328	S	192	GACCCTTTCATTCTTCAGGCATTCGTCACGGCAGGAGCCACGAAAATTCC	20	+	29473075-29473124	20q11.21b	Homo sapiens defensin, beta 122 (DEFB122) on chromosome 20.				DEFB-22	DEFB-22
Homo sapiens	RefSeq	NM_006427.2	ILMN_26581	SIVA	NM_006427.2	NM_006427.2		10572	11277467	NM_006427.2	SIVA	NP_006418.2	ILMN_1787248	0005550673	I	282	CACGTGGGCAGATGCTGATTGGACCAGACGGCCGCCTGATCAGGAGCCTT	14	+	104293138-104293187	14q32.33b	Homo sapiens CD27-binding (Siva) protein (SIVA), transcript variant 1, mRNA.				CD27BP	CD27BP
Homo sapiens	Unigene	Hs.536417	ILMN_103076	HS.536417	Hs.536417		Hs.536417		5053849	AI732736			ILMN_1887994	0006350167	S	379	CCATTTGCGAGGCGGGGAGAGGAGCCTATAATGAGAGCAGGAAGTCTAGC	14	+	72127164-72127213		zw18g10.x5 Soares ovary tumor NbHOT Homo sapiens cDNA clone IMAGE:769698 3 similar to TR:O54850 O54850 ENDONUCLEASE/REVERSE TRANSCRIPTASE. [1] ;, mRNA sequence					
Homo sapiens	RefSeq	XM_929515.1	ILMN_43836	LOC646582	XM_929515.1	XM_929515.1		646582	89059516	XM_929515.1	LOC646582	XP_934608.1	ILMN_1677435	0006420053	S	181	CAGAGGATGTATGAAAAATCCTGGGTGTCCAGACAGAAGCCTCCTGCAGG	X	-	36377181-36377230		PREDICTED: Homo sapiens hypothetical protein LOC646582 (LOC646582), mRNA.					
Homo sapiens	Unigene	Hs.535454	ILMN_102925	HS.535454	Hs.535454		Hs.535454		21758757	AK098676			ILMN_1914405	0002810189	S	1355	TGCAGTCCACAATGTCCATAGTGCTAAGGAGAAGAAACCCTGTCCTAGGG	16	-	50674728-50674777		Homo sapiens cDNA FLJ25810 fis, clone TST07303					
Homo sapiens	RefSeq	NM_004550.3	ILMN_9109	NDUFS2	NM_004550.3	NM_004550.3		4720	34147556	NM_004550.3	NDUFS2	NP_004541.1	ILMN_1789342	0000430717	S	1817	GTATTTGGAGAAGTAGATCGGTGAGCAGGGGAGCAGCGTTTGATCCCCCC	1	+	159450584-159450607:159450608-159450633	1q23.3a	Homo sapiens NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase) (NDUFS2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9647766] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9585441] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 17209039] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 11112787] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9647766] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 12857734] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [pmid 14749350] [evidence IMP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9647766] [evidence NAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9647766] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]		
Homo sapiens	RefSeq	XM_939386.1	ILMN_36810	LOC390829	XM_939386.1	XM_939386.1		390829	89047312	XM_939386.1	LOC390829	XP_944479.1	ILMN_1740784	0004730735	A	303	CAGTCTGGATCCCTCCATGGCCAGAGACCCCCTTTATGGGACTGAGGATC				18p11.22c	PREDICTED: Homo sapiens hypothetical LOC390829 (LOC390829), mRNA.					
Homo sapiens	RefSeq	NM_014424.3	ILMN_26974	HSPB7	NM_014424.3	NM_014424.3		27129	34147560	NM_014424.3	HSPB7	NP_055239.1	ILMN_2200836	0004560523	S	2287	GCCTTAACCCTGGGAAATGCCTGCTGCCCCCAGTGACTCTTGGTTTCGTC	1	-	16213331-16213380	1p36.13f	Homo sapiens heat shock 27kDa protein family, member 7 (cardiovascular) (HSPB7), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 10593960] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 10593960] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10593960] [evidence TAS]	DKFZp779D0968; cvHSP; FLJ32733	DKFZp779D0968; cvHSP; FLJ32733
Homo sapiens	RefSeq	NM_198083.1	ILMN_18916	DHRS4L2	NM_198083.2	NM_198083.2		317749	126723190	NM_198083.2	DHRS4L2	NP_932349.2	ILMN_1761450	0001070414	S	657	CTCCTGGCTTCAGTCCTTACAATGTCAGTAAAACAGCCTTGCTGGGCCTC	14	+	23540129-23540133:23540433-23540477	14q11.2g	Homo sapiens dehydrogenase/reductase (SDR family) member 4 like 2 (DHRS4L2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC905	MGC905
Homo sapiens	RefSeq	NR_029948.1	ILMN_387871	MIR425	NR_029948.1	NR_029948.1		494337	262205357	NR_029948.1	MIR425		ILMN_3310276	0004050088	S	1	AAAGCGCTTTGGAATGACACGATCACTCCCGTTGAGTGGGCACCCGAGAA				3p21.31d	Homo sapiens microRNA 425 (MIR425), microRNA.					
Homo sapiens	RefSeq	NM_001010902.1	ILMN_181012	LOC388915	NM_001010902.1	NM_001010902.1		388915	58219021	NM_001010902.1	LOC388915	NP_001010902.1	ILMN_1718382	0007380364	S	794	GGCCAGGAAAACAGAAACTCCATCCTGGAGCAGAAGATGGAACCCAGCAC	22	+	46916258-46916290:46916487-46916503	22q13.31f	Homo sapiens hypothetical LOC388915 (LOC388915), mRNA.					
Homo sapiens	RefSeq	XM_926594.1	ILMN_31759	LOC642502	XM_926594.2	XM_926594.2		642502	113426610	XM_926594.2	LOC642502	XP_931687.1	ILMN_1779032	0004640762	S	551	CTCCTTGGAGCAGTAGAGTACCTGGTAGACCTTAATAGTGGAAAACGGTC	17	-	1707905-1707954	17p13.3d	PREDICTED: Homo sapiens similar to succinate dehydrogenase complex, subunit C isoform 3 precursor (LOC642502), mRNA.					
Homo sapiens	RefSeq	NM_001554.3	ILMN_21983	CYR61	NM_001554.3	NM_001554.3		3491	34222286	NM_001554.3	CYR61	NP_001545.2	ILMN_2188264	0003930605	S	1508	GAAACTGCCAAGGGTGCTGGTGCGGATGGACACTAATGCAGCCACGATTG	1	+	85821467-85821516	1p22.3e	Homo sapiens cysteine-rich, angiogenic inducer, 61 (CYR61), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9135077] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9135077] [evidence TAS]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	CCN1; IGFBP10; GIG1	IGFBP10; CCN1; GIG1
Homo sapiens	RefSeq	NM_014596.4	ILMN_20009	ZNRD1	NM_014596.4	NM_014596.4		30834	25777705	NM_014596.4	ZNRD1	NP_055411.1	ILMN_2398587	0004890112	A	191	AGTCGGACCTGGATTTCTGTTCAGATTGCGGCTCGGTCCTGCCTCTGCCC	6	+	30029342-30029391	6p21.33b	Homo sapiens zinc ribbon domain containing 1 (ZNRD1), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	hZR14; tctex-6; MGC13376; Rpa12; HTEX-6	hZR14; tctex-6; MGC13376; Rpa12; HTEX-6
Homo sapiens	RefSeq	NM_018063.3	ILMN_164061	HELLS	NM_018063.3	NM_018063.3		3070	27894386	NM_018063.3	HELLS	NP_060533.2	ILMN_2202423	0007040161	S	2859	CAGGCTGATGTGTACTTAACCACTTCCAGATTTATACAGTCTTCCTGTGG	10	+	96340288-96340299:96340385-96340422	10q23.33c	Homo sapiens helicase, lymphoid-specific (HELLS), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence ISS]	Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence ISS]; Any process involved in maintaining the methylation state of a nucleotide sequence [goid 10216] [evidence ISS]; The assembly of chromatin into heterochromatin near the centromere [goid 31508] [evidence ISS]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence ISS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PASG; Nbla10143; FLJ10339; SMARCA6; LSH	PASG; Nbla10143; FLJ10339; SMARCA6; LSH
Homo sapiens	RefSeq	NM_018063.3	ILMN_164061	HELLS	NM_018063.3	NM_018063.3		3070	27894386	NM_018063.3	HELLS	NP_060533.2	ILMN_1783610	0004540768	S	2197	CCCCAGTCGGATCTTCAGGCCCAGGATAGATGTCATAGAATTGGTCAGAC	10	+	96333900-96333944:96334311-96334315	10q23.33c	Homo sapiens helicase, lymphoid-specific (HELLS), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence ISS]	Repression of transcription by methylation of DNA, leading to the formation of heterochromatin [goid 6346] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence ISS]; Any process involved in maintaining the methylation state of a nucleotide sequence [goid 10216] [evidence ISS]; The assembly of chromatin into heterochromatin near the centromere [goid 31508] [evidence ISS]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence ISS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PASG; Nbla10143; FLJ10339; SMARCA6; LSH	PASG; Nbla10143; FLJ10339; SMARCA6; LSH
Homo sapiens	RefSeq	NM_001034841.1	ILMN_3559	LOC162073	NM_001034841.1	NM_001034841.1		162073	77798168	NM_001034841.1	LOC162073	NP_001030013.1	ILMN_2219246	0001240095	S	1672	TGAAGGTGAACCGTAAACCCTGACAGCACCCCCACCTGACCAAATGCTCC	16	+	19034877-19034892:19034893-19034926	16p12.3b	Homo sapiens hypothetical protein LOC162073 (LOC162073), mRNA.				MGC126798; MGC126800	MGC126798; MGC126800
Homo sapiens	RefSeq	NM_015685.3	ILMN_26754	SDCBP2	NM_015685.3	NM_015685.3		27111	38016915	NM_015685.3	SDCBP2	NP_056500.2	ILMN_2376822	0002760524	A	825	GGCTTCCCGCCCTCCTGCAGCAAAGGGCAACCACCCTCGGATGATGGGTT	20	-	1239005-1239054	20p13e	Homo sapiens syndecan binding protein (syntenin) 2 (SDCBP2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11152476] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11152476] [evidence IC ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 11152476] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 11152476] [evidence NAS]; The directed movement of substances within a cell [goid 46907] [pmid 11152476] [evidence NAS]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11152476] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11152476] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11152476] [evidence IPI]	SITAC18; ST-2	SITAC18; ST-2
Homo sapiens	RefSeq	NM_015685.3	ILMN_26754	SDCBP2	NM_015685.3	NM_015685.3		27111	38016915	NM_015685.3	SDCBP2	NP_056500.2	ILMN_2277246	0003610364	I	7	AGCGTGGACTGGGGACGTGGGGGGACCCGGGGACGGCTCCATCCTCCTTT	20	-	1242227-1242276	20p13e	Homo sapiens syndecan binding protein (syntenin) 2 (SDCBP2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11152476] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11152476] [evidence IC ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 11152476] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 11152476] [evidence NAS]; The directed movement of substances within a cell [goid 46907] [pmid 11152476] [evidence NAS]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11152476] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11152476] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11152476] [evidence IPI]	SITAC18; ST-2	SITAC18; ST-2
Homo sapiens	RefSeq	NM_058188.1	ILMN_15681	C21ORF67	NM_058188.1	NM_058188.1		84536	17158018	NM_058188.1	C21orf67	NP_478068.1	ILMN_1808602	0006660296	S	969	TCCCTGGGGGTTGGGGGCTGTGTCTCTCCATCCCTTAGTAAAAATACAGC	21	-	45179082-45179131	21q22.3e	Homo sapiens chromosome 21 open reading frame 67 (C21orf67), mRNA.				PRED54; MGC149387; MGC149386	PRED54; MGC149387; MGC149386
Homo sapiens	RefSeq	NM_201381.1	ILMN_25608	PLEC1	NM_201381.1	NM_201381.1		5339	41322909	NM_201381.1	PLEC1	NP_958783.1	ILMN_1709256	0004610468	I	40	TCCGTCTGCCCCGTGGGCTCCTGCCACCGTCCCCGATGAAGATCGTGCCC	8	-	145090804-145090819:145090820-145090853	8q24.3g	Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 7, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8633055] [evidence NAS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8696340] [evidence TAS]	EBS1; HD1; PLTN; EBSO; PCN; PLEC1b	EBS1; HD1; PLTN; EBSO; PCN; PLEC1b
Homo sapiens	RefSeq	NM_015137.1	ILMN_4161	EFR3A	NM_015137.3	NM_015137.3		23167	154146217	NM_015137.3	EFR3A	NP_055952.2	ILMN_1664776	0000110161	S	4826	TCTGCAAGAGATTCTGCAGGAACTGGGTGTGCACACGGTGTTGTAGCCAG	8	+	133025013-133025062	8q24.22b	Homo sapiens EFR3 homolog A (S. cerevisiae) (EFR3A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0143; DKFZp781J0562	DKFZp781J0562
Homo sapiens	RefSeq	XM_942001.1	ILMN_41286	LOC652522	XM_942001.1	XM_942001.1		652522	89062969	XM_942001.1	LOC652522	XP_947094.1	ILMN_1698884	0003830224	S	567	GGTAGAACCAACTCATTCTAAATGCTTAAAAATGGAAAGAAATCTGGCAC					PREDICTED: Homo sapiens similar to Werner syndrome protein (LOC652522), mRNA.					
Homo sapiens	RefSeq	XM_927249.1	ILMN_36521	LOC442421	XM_927249.1	XM_927249.1		442421	89029410	XM_927249.1	LOC442421	XP_932342.1	ILMN_1785452	0005050209	S	1354	CACTGGAACTTTCTGTGGCGCCCACCACTCAGCCCTTCCCAGCACTTGTC	9	+	66241087-66241136	9q12g	PREDICTED: Homo sapiens similar to prostaglandin E receptor 4, subtype EP4; PGE receptor, EP4 subtype; prostaglandin E2 receptor (LOC442421), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [evidence IEA]		
Homo sapiens	RefSeq	NM_020871.2	ILMN_163747	LRCH2	NM_020871.3	NM_020871.3		57631	154091019	NM_020871.3	LRCH2	NP_065922.3	ILMN_1720606	0004730731	S	4402	GCCAAATGGCAACACCACGTCTAAAGCAGTTTCACAGCATGGTCCCCTAC	X	-	114346036-114346085	Xq23c-q23d	Homo sapiens leucine-rich repeats and calponin homology (CH) domain containing 2 (LRCH2), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1495; dA204F4.4; MGC150671	KIAA1495; dA204F4.4
Homo sapiens	RefSeq	NM_001010859.1	ILMN_9973	C22ORF42	NM_001010859.1	NM_001010859.1		150297	60592763	NM_001010859.1	C22orf42	NP_001010859.1	ILMN_1711067	0005290064	S	655	GCCTATCTGTCTCTCTTGAAGACCTCATGACACCGGAGATGGCAAAGGAG	22	-	32545758-32545767:32546306-32546345	22q12.3a	Homo sapiens chromosome 22 open reading frame 42 (C22orf42), mRNA.				dJ90G24.6; RP1-127L4.6	dJ90G24.6; RP1-127L4.6
Homo sapiens	RefSeq	NM_019070.3	ILMN_13684	DDX49	NM_019070.3	NM_019070.3		54555	34222345	NM_019070.3	DDX49	NP_061943.2	ILMN_1762225	0000450309	S	1297	AAGCAGCTGATCCTGGAGGGGAAGGACCCTGACCTGGAGGCCAAGCGCAA	19	+	18899822-18899845:18899937-18899962	19p13.11b	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 (DDX49), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ10432; R27090_2	FLJ10432; R27090_2
Homo sapiens	RefSeq	NM_002902.1	ILMN_8519	RCN2	NM_002902.1	NM_002902.1		5955	4506456	NM_002902.1	RCN2	NP_002893.1	ILMN_1662129	0006960411	S	939	CCCGGACTTGTTTCTCACCAGTGAAGCCACAGATTATGGCAGACAGCTCC	15	+	75028536-75028585	15q24.3a	Homo sapiens reticulocalbin 2, EF-hand calcium binding domain (RCN2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8034671] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8034671] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7624774] [evidence TAS]	ERC-55; ERC55; E6BP	ERC-55; ERC55; E6BP
Homo sapiens	RefSeq	NM_002902.1	ILMN_8519	RCN2	NM_002902.1	NM_002902.1		5955	4506456	NM_002902.1	RCN2	NP_002893.1	ILMN_2107607	0004260452	S	1295	TTGAGTTCTATTTCCAGACTTGAAAACATGGAGGATTTTAGAGATGCCTG	15	+	75028892-75028941	15q24.3a	Homo sapiens reticulocalbin 2, EF-hand calcium binding domain (RCN2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8034671] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8034671] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7624774] [evidence TAS]	ERC-55; ERC55; E6BP	ERC-55; ERC55; E6BP
Homo sapiens	RefSeq	NM_032531.1	ILMN_20947	KIRREL3	NM_032531.2	NM_032531.2		84623	78042575	NM_032531.2	KIRREL3	NP_115920.1	ILMN_1674541	0003180152	S	2326	GCAAGGCTTCTGCTTCCTCCTCCCACCACTCCCAGTCCTCGTCCCAGAAC	11	-	125799732-125799781	11q24.2c	Homo sapiens kin of IRRE like 3 (Drosophila) (KIRREL3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12424224] [evidence IPI]	KIRRE; PRO4502; NEPH2; KIAA1867; MGC126824; MGC126850	KIRRE; PRO4502; NEPH2; KIAA1867
Homo sapiens	RefSeq	XR_037866.1	ILMN_344314	LOC100128460	XR_037866.1	XR_037866.1		100128460	169166309	XR_037866.1	LOC100128460		ILMN_3187283	0001340403	A	2920	CAGCTACCCGGAAGGCTGAGGCAGGAGAATTGCGTGAACCAGGCAGGAAA	4	-	120545510-120545559	4q26f	PREDICTED: Homo sapiens misc_RNA (LOC100128460), miscRNA.					
Homo sapiens	RefSeq	NM_016194.3	ILMN_2814	GNB5	NM_016194.3	NM_016194.3		10681	61835173	NM_016194.3	GNB5	NP_057278.2	ILMN_1712348	0005820017	I	2	CACCTCTCACCATCTGCTCTGTGGCTCCCAGTGCTGACTCTGGAAGCTTT	15	-	52476887-52476891:52483519-52483563	15q21.2c	Homo sapiens guanine nucleotide binding protein (G protein), beta 5 (GNB5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9606987] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9606987] [evidence NAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9606987] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ37457; FLJ43714; GB5	FLJ37457; FLJ43714; GB5
Homo sapiens	RefSeq	NM_001005862.1	ILMN_164978	ERBB2	NM_001005862.1	NM_001005862.1		2064	54792097	NM_001005862.1	ERBB2	NP_001005862.1	ILMN_1717902	0001070673	I	370	CAGATAAAACGGGGGCACCAGTAGAATGGCCAGGACAAACGCAGTGCAGC	17	+	35104827-35104876	17q12c	Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) (ERBB2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12000754] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15609325] [evidence NAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 12646923] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; Any protein group composed of two or more subunits, which may or may not be identical, which undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43235] [pmid 7556068] [evidence TAS]; Any protein group composed of two or more subunits, which may or may not be identical, which undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43235] [pmid 7514177] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33088] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 15609325] [evidence NAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 15504738] [evidence TAS]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10851066] [evidence TAS]; A series of reactions, mediated by the intracellular phosphoinositide 3-kinase (PI3K). PI3K cascades lie downstream of many cell surface receptor linked signaling pathways and regulate numerous cellular functions [goid 14065] [pmid 7556068] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [pmid 15504738] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33088] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 12646923] [evidence IDA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [pmid 10572067] [evidence IDA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [pmid 15609325] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 7556068] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 7556068] [evidence IDA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 10572067] [evidence IDA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4716] [pmid 10851066] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7514177] [evidence IDA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 15504738] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [pmid 7514177] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16843263] [evidence IPI]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 9590694] [evidence TAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 15504738] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10572067] [evidence IDA]	c-erb B2; HER2; HER-2; NGL; NEU; TKR1; HER-2/neu	c-erb B2; CD340; HER2; NGL; NEU; HER-2/neu; HER-2; TKR1
Homo sapiens	RefSeq	NM_017726.6	ILMN_162515	PPP1R14D	NM_017726.6	NM_017726.6		54866	17511260	NM_017726.6	PPP1R14D	NP_060196.1	ILMN_1788267	0001300162	S	438	CATTCTTGGGAACTGCCCCCGCCCCACAGAGGCTTTTATCTCTGAGCTGC	15	-	38895204-38895251:38895452-38895453	15q15.1b	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 14D (PPP1R14D), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC119016; MGC119014; GBPI-1; FLJ20251; CPI17-like	MGC119016; FLJ20251; MGC119014; GBPI-1; CPI17-like
Homo sapiens	RefSeq	NM_206922.1	ILMN_23843	CRIP3	NM_206922.2	NM_206922.2		401262	116517304	NM_206922.2	CRIP3	NP_996805.2	ILMN_1719455	0001190358	S	338	ATATGAAGACATTCACTGGGGAGACCTCGCTGTGCCCTGGCTGTGGGGAG	6	-	43382174-43382223	6p21.1d	Homo sapiens cysteine-rich protein 3 (CRIP3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TLP-A; bA480N24.2; TLP	TLP-A; bA480N24.2; TLP
Homo sapiens	RefSeq	NM_003718.2	ILMN_872	CDC2L5	NM_003718.3	NM_003718.3		8621	145309301	NM_003718.3	CDC2L5	NP_003709.3	ILMN_1778557	0006280044	A	5187	CAAACAGCCCCTCCCCACCTCCAGTTTTACAACAATCAGAAAGGGCACTG	7	+	40041547-40041596	7p14.1c	Homo sapiens cell division cycle 2-like 5 (cholinesterase-related cell division controller) (CDC2L5), transcript variant 1, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 1731328] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1731328] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 1731328] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CDC2L; CHED; FLJ35215; KIAA1791	KIAA1791; CDC2L; CHED
Homo sapiens	RefSeq	NM_016310.2	ILMN_16887	POLR3K	NM_016310.2	NM_016310.2		51728	14589957	NM_016310.2	POLR3K	NP_057394.1	ILMN_1801664	0007000703	S	484	CCTTTTGAGGTGAAGAGCCAGGGGGTCAGGAAATATGGCCTATCTGCCAG	16	-	97262-97311	16p13.3f	Homo sapiens polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa (POLR3K), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5666] [pmid 9869639] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 9869639] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 9869639] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C11; RPC10; C11-RNP3; My010; RPC11; hRPC11	C11; RPC10; C11-RNP3; My010; RPC11; hRPC11
Homo sapiens	RefSeq	NM_001770.3	ILMN_2004	CD19	NM_001770.4	NM_001770.4		930	91105173	NM_001770.4	CD19	NP_001761.3	ILMN_1782704	0007210136	S	1740	GGTGGCCAGCCTGGATCTCCTCAAGTCCCCAAGATTCACACCTGACTCTG	16	+	28857792-28857800:28857963-28858003	16p11.2e	Homo sapiens CD19 molecule (CD19), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2472450] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2472450] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]	A defense response that is mediated by cells [goid 6968] [pmid 1373518] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 1714482] [evidence TAS]	 [goid 5057] [pmid 1373518] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8647200] [evidence IPI]	B4; MGC12802	B4; MGC12802
Homo sapiens	RefSeq	NM_182755.1	ILMN_756	ZNF438	NM_182755.1	NM_182755.1		220929	33300650	NM_182755.1	ZNF438	NP_877432.1	ILMN_1678494	0003440360	S	2707	CACCACTGGAAGCACCAGCATAACTGTGAGGACCCTTCCAAACTGTGGGC	10	-	31173956-31174005	10p11.23a	Homo sapiens zinc finger protein 438 (ZNF438), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC126671; FLJ32761; bA330O11.1; RP11-330O11.1	MGC126671; FLJ32761; bA330O11.1; RP11-330O11.1
Homo sapiens	RefSeq	NM_017584.5	ILMN_5097	MIOX	NM_017584.5	NM_017584.5		55586	50409862	NM_017584.5	MIOX	NP_060054.4	ILMN_1674353	0003420475	S	1343	ACCCCCACATGCTCAAAACAGTCACCAAGTCCTCTGGGCTCCGTCCCCTT	22	+	49275522-49275571	22q13.33b	Homo sapiens myo-inositol oxygenase (MIOX), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Intracellular foci at which aggregated proteins have been sequestered [goid 16234] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 19310] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [evidence ISS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: myo-inositol + O2 = D-glucuronate + H2O [goid 50113] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: myo-inositol + O2 = D-glucuronate + H2O [goid 50113] [evidence IEA]; Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]; Catalysis of the reaction: myo-inositol + O2 = D-glucuronate + H2O [goid 50113] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: myo-inositol + O2 = D-glucuronate + H2O [goid 50113] [evidence IEA]	ALDRL6; MGC90217	ALDRL6; MGC90217
Homo sapiens	RefSeq	NM_014600.1	ILMN_183388	EHD3	NM_014600.1	NM_014600.1		30845	7657055	NM_014600.1	EHD3	NP_055415.1	ILMN_1671473	0007510008	S	3263	CTCAGAAGGCTAACTTGAGAGGTTTGGGGCCTTGTTCCCCAGAGGGTCCC	2	+	31344444-31344493	2p23.1a	Homo sapiens EH-domain containing 3 (EHD3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10673336] [evidence TAS]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [pmid 10673336] [evidence TAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	PAST3	PAST3
Homo sapiens	RefSeq	NM_173360.2	ILMN_5516	SPATA9	NM_031952.3	NM_031952.3		83890	124517732	NM_031952.3	SPATA9	NP_114158.2	ILMN_1697328	0007570609	A	472	GACATATCTGGTCGTCTGCTGAGGGAAGTTAATGCGCCGAGGCAACCCCT	5	-	95036884-95036933	5q15c	Homo sapiens spermatogenesis associated 9 (SPATA9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		FLJ35906; NYD-SP16	FLJ35906; NYD-SP16
Homo sapiens	RefSeq	NM_207421.1	ILMN_166846	PADI6	NM_207421.3	NM_207421.3		353238	117414157	NM_207421.3	PADI6	NP_997304.3	ILMN_1748221	0002190373	S	1817	AGAGGTCCTTTGCGAGGCCATACTTCCCTGACCTGTTGCGGATGATTGTG	1	+	17597895-17597930:17600288-17600301	1p36.13d	Homo sapiens peptidyl arginine deiminase, type VI (PADI6), mRNA.					
Homo sapiens	RefSeq	NM_033069.1	ILMN_7456	C6ORF114	NM_033069.2	NM_033069.2		85411	141803568	NM_033069.2	C6orf114	NP_149060.1	ILMN_1692160	0007400280	S	1376	CCATAACTGAGGAGACAATAGCCTGGGGACTGCATGTATCCCACAGGATG	6	-	13577589-13577638	6p23b	Homo sapiens chromosome 6 open reading frame 114 (C6orf114), mRNA.				RP11-501I19.1; ADG-90; FLJ20330	RP11-501I19.1; ADG-90; FLJ20330
Homo sapiens	RefSeq	NM_001004353.1	ILMN_14186	C9ORF173	NM_001004353.2	NM_001004353.2		441476	124248530	NM_001004353.2	C9orf173	NP_001004353.2	ILMN_1795673	0002260092	S	1118	CTGGATCCCCCATCTGCCCATCTCCCCGCTACACTGAGATGCTGTTGGTT	9	+	139267700-139267749	9q34.3f	Homo sapiens chromosome 9 open reading frame 173 (C9orf173), mRNA.				FLJ40246	FLJ40246
Homo sapiens	RefSeq	NM_022663.1	ILMN_42133	CTAGE1	NM_172241.2	NM_172241.2		64693	90819228	NM_172241.2	CTAGE1	NP_758441.2	ILMN_1802029	0002710504	A	4099	GGTATTGTCATCTCTTTGTGTCTACTTTGCCACCTTTCCCCAGAATAGGC	18	-	19993730-19993779	18q11.2a	Homo sapiens cutaneous T-cell lymphoma-associated antigen 1 (CTAGE1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]		CTAGE-2; CTAGE-1	CTAGE-2; CTAGE-1
Homo sapiens	RefSeq	NM_001123040.1	ILMN_356785	C3ORF71	NM_001123040.1	NM_001123040.1		646450	176866317	NM_001123040.1	C3orf71	NP_001116512.1	ILMN_3241670	0000650537	S	1161	TGCCAGTATGAAGCCGCTGATGTTAGGAAGGCTCCAGGTTGTGCAATTCC	3	-	48955608-48955657	3p21.31e	Homo sapiens chromosome 3 open reading frame 71 (C3orf71), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_945002.1	ILMN_35144	LOC646720	XM_933843.2	XM_933843.2		646720	113417491	XM_933843.2	LOC646720	XP_938936.1	ILMN_1815765	0001780193	S	117	GGCCCTCTTCCTGACACTGCTGATGCTGGAGGCTGCTTATAAGCTGCTAA	6	-	33404802-33404804:33404857-33404903	6p21.32a	PREDICTED: Homo sapiens similar to mCG56376 (LOC646720), mRNA.					
Homo sapiens	RefSeq	NM_020040.3	ILMN_177504	TUBB4Q	NM_020040.3	NM_020040.3		56604	55770867	NM_020040.3	TUBB4Q	NP_064424.3	ILMN_1750100	0001990327	S	1196	GCGAGGGCATGGATGAGATGGAATTCACTGAGGCCGAGAGCAACATGAAC	4	-	191140731-191140780	4q35.2d	Homo sapiens tubulin, beta polypeptide 4, member Q (TUBB4Q), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10828619] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 10828619] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	Unigene	Hs.572999	ILMN_125180	HS.572999	Hs.572999		Hs.572999		27837155	BX111671			ILMN_1891413	0001400162	S	189	TACAGTAACACCAGTAACACAGTCCCCAAGCACCTCTCCCCGACCTGCCC	3	+	108666779-108666828		BX111671 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGp998C205228, mRNA sequence					
Homo sapiens	RefSeq	NM_002912.1	ILMN_17913	REV3L	NM_002912.1	NM_002912.1		5980	4506482	NM_002912.1	REV3L	NP_002903.1	ILMN_2199947	0000610040	S	9632	TCCATAAAGCTACCAGCTCCTCGCGAAGTGAACCTGAAGGGCGGAAAGGC	6	-	111735413-111735462	6q21h	Homo sapiens REV3-like, catalytic subunit of DNA polymerase zeta (yeast) (REV3L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 9618506] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 9618506] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]	POLZ; REV3	POLZ; REV3
Homo sapiens	RefSeq	NM_003070.3	ILMN_23392	SMARCA2	NM_003070.3	NM_003070.3		6595	48255899	NM_003070.3	SMARCA2	NP_003061.3	ILMN_1672419	0001770086	I	4301	GTAACGTGGAGAAGGTGCCCAGTAATTCTCAGTTGGAAATAGAAGGAAAC	9	+	2073220-2073269	9p24.3a	Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8670841] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8223438] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 8223438] [evidence TAS]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [pmid 8223438] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16341228] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14701856] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15696166] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12200431] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12437990] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16341228] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8895581] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Sth1p; SNF2L2; SWI2; FLJ36757; SNF2; BAF190; MGC74511; BRM; hBRM; SNF2LA; hSNF2a	Sth1p; SNF2L2; SWI2; FLJ36757; SNF2; BAF190; MGC74511; BRM; hBRM; SNF2LA; hSNF2a
Homo sapiens	RefSeq	NM_139045.2	ILMN_23392	SMARCA2	NM_003070.3	NM_003070.3		6595	48255899	NM_003070.3	SMARCA2	NP_003061.3	ILMN_1791702	0005290474	A	5634	CTTTGCTTTCTTTGCACAATGTCTTTGGTTGCAAGTCATAAGCCTGAGGC	9	+	2086683-2086732	9p24.3a	Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (SMARCA2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8670841] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8223438] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 8223438] [evidence TAS]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [pmid 8223438] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16341228] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14701856] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15696166] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12200431] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12437990] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16341228] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8895581] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Sth1p; SNF2L2; SWI2; FLJ36757; SNF2; BAF190; MGC74511; BRM; hBRM; SNF2LA; hSNF2a	Sth1p; SNF2L2; SWI2; FLJ36757; SNF2; BAF190; MGC74511; BRM; hBRM; SNF2LA; hSNF2a
Homo sapiens	RefSeq	NM_000404.1	ILMN_23626	GLB1	NM_000404.1	NM_000404.1		2720	10834965	NM_000404.1	GLB1	NP_000395.1	ILMN_1735155	0004560064	S	2206	TGTGCATTTTCACCTGAGGTTTCCCTGCATCCCTGCAGTGCCAAAGCCCC	3	-	33013372-33013421	3p22.3c	Homo sapiens galactosidase, beta 1 (GLB1), transcript variant 179423, mRNA.	A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A multimeric enzyme complex that in E. coli is a heterooctamer made up of four alpha subunits and four beta subunits. Catalyzes the hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides [goid 9341] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the hydrolysis of terminal, non-reducing beta-D-galactose residues in beta-D-galactosides [goid 4565] [pmid 3143362] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]		
Homo sapiens	RefSeq	NM_148676.1	ILMN_167153	DSCR10	NM_148676.2	NM_148676.2		259234	115430105	NM_148676.2	DSCR10	NP_683517.1	ILMN_1777917	0003190273	S	473	AAACACCGTACCCCTGCACCAGCCTCTGCCTCAGCTCTTCACAGTCAGCA	21	+	38502221-38502270	21q22.13b	Homo sapiens Down syndrome critical region gene 10 (DSCR10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	XM_943519.1	ILMN_44395	CSN1S2A	XM_379270.4	XM_379270.4		286828	113415628	XM_379270.4	CSN1S2A	XP_379270.1	ILMN_1807868	0005290477	A	361	TCACTGTCCCCCAGTATGTCCAGGCTGTTCCCCTTGTAGTCTATGAGCCT	4	+	70981797-70981846	4q13.3a	PREDICTED: Homo sapiens casein alpha s2-like A, transcript variant 1 (CSN1S2A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Homo sapiens	RefSeq	XM_001725801.1	ILMN_334929	LOC100132296	XM_001725801.1	XM_001725801.1		100132296	169213456	XM_001725801.1	LOC100132296	XP_001725853.1	ILMN_3235617	0000240095	S	505	TCGGGAGCTCGGAGTGAGCGTGAGTTCCGTGCCCAGGCCCGCGACTCGGC	19	-	22109-22158	19p13.3j	PREDICTED: Homo sapiens hypothetical protein LOC100132296 (LOC100132296), mRNA.					
Homo sapiens	RefSeq	NM_001127395.1	ILMN_365176	FAM119A	NM_001127395.1	NM_001127395.1		151194	188528685	NM_001127395.1	FAM119A	NP_001120867.1	ILMN_3251137	0001940019	M	4231	TCCCAAGCTTTCCCTGCTTCCTTAACAACGCATAGGATGACATTAAAAGT	2	-	208474363-208474412	2q33.3c	Homo sapiens family with sequence similarity 119, member A (FAM119A), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_022072.2	ILMN_20057	NSUN3	NM_022072.3	NM_022072.3		63899	142345779	NM_022072.3	NSUN3	NP_071355.1	ILMN_1676280	0006290086	S	1040	CCAGGAATGTGGGCTCTTAGTGATTCCAGATAAGGGCAAAGCCTGGGGCC	3	+	93845235-93845284	3q11.2a	Homo sapiens NOP2/Sun domain family, member 3 (NSUN3), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MSTP077; FLJ22609; FLJ22109; MST077	MSTP077; FLJ22609; FLJ22109; MST077
Homo sapiens	RefSeq	XM_926027.1	ILMN_32849	LOC642538	XM_926027.2	XM_926027.2		642538	113421634	XM_926027.2	LOC642538	XP_931120.1	ILMN_1652611	0005910520	S	162	TGATGTCTGTTTCTAGAAATGAGTTGTTGCAGAAGTTGGACCCACTTGAA	10	-	81781976-81782025	10q22.3f	PREDICTED: Homo sapiens similar to nuclear DNA-binding protein (LOC642538), mRNA.					
Homo sapiens	RefSeq	NM_001010888.1	ILMN_1112	ZC3H12B	NM_001010888.2	NM_001010888.2		340554	148746186	NM_001010888.2	ZC3H12B	NP_001010888.2	ILMN_1814629	0000630195	S	6947	TTAACCAGAGGTGAGTGAAAATATAGCCCTTCCCCAGTTTTGTCTGCCCC	X	+	64644274-64644323	Xq11.1c	Homo sapiens zinc finger CCCH-type containing 12B (ZC3H12B), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CXorf32	CXorf32
Homo sapiens	RefSeq	NM_005040.2	ILMN_19415	PRCP	NM_005040.2	NM_005040.2		5547	40805839	NM_005040.2	PRCP	NP_005031.1	ILMN_2367215	0006110386	A	1918	CTGCAAGCAGAGATTTCTCTTTGGTTTTGAGGTTGAAGTGTCTTTGGCCC	11	-	82535584-82535633	11q14.1d	Homo sapiens prolylcarboxypeptidase (angiotensinase C) (PRCP), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [pmid 28321] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	HUMPCP; PCP; MGC2202	HUMPCP; PCP; MGC2202
Homo sapiens	RefSeq	NM_001004318.1	ILMN_3500	FLJ16165	NM_001004318.1	NM_001004318.1		390928	51972209	NM_001004318.1	FLJ16165	NP_001004318.1	ILMN_1709725	0002750681	S	2127	CCCTTCATGCCTCAGTTTCCCAGCCTGGCACCATCTTATTCGGGAAGAGG	19	+	44293134-44293183	19q13.2a	Homo sapiens purple acid phosphatase long form (FLJ16165), mRNA.				PAPL	PAPL
Homo sapiens	RefSeq	NM_033416.1	ILMN_17292	IMP4	NM_033416.1	NM_033416.1		92856	15529981	NM_033416.1	IMP4	NP_219484.1	ILMN_2156982	0006560041	S	977	AGAATGGCCTGCTGAACTGGGATGTGGAACTGTGGCGGGTGGAGAGGTCT	2	+	130820595-130820644	2q21.1b	Homo sapiens IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) (IMP4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 12655004] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [pmid 12655004] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12655004] [evidence IPI]	MGC19606; BXDC4	MGC19606; BXDC4
Homo sapiens	RefSeq	NM_198075.1	ILMN_13407	LRRC56	NM_198075.2	NM_198075.2		115399	142363978	NM_198075.2	LRRC56	NP_932341.1	ILMN_1759772	0000870669	S	2643	CTCCTCTTGGCGCAGGACGCCCCGGAACCCAAACCAACATTTCCAGCTCT	11	+	544790-544839	11p15.5d	Homo sapiens leucine rich repeat containing 56 (LRRC56), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp761L1518; FLJ00101	DKFZp761L1518; FLJ00101
Homo sapiens	Unigene	Hs.283188	ILMN_84655	HS.283188	Hs.283188		Hs.283188		21748664	AK090490			ILMN_1827413	0002600064	S	1587	ACGTGCCCAGACCTCCTGCCAGCTCAGGGATAGGGGAAAACACCATCCAT	17	-	46367764-46367813		Homo sapiens cDNA FLJ33171 fis, clone ADRGL2000644					
Homo sapiens	RefSeq	NM_004891.2	ILMN_13012	MRPL33	NM_145330.2	NM_145330.2		9553	94421449	NM_145330.2	MRPL33	NP_663303.1	ILMN_1706326	0005570494	A	42	ACTGCCCAGGTGTGGTCACCATGTTCCTCTCCGCGGTCTTCTTTGCCAAG	2	+	27848129-27848148:27848149-27848170:27849045-27849052	2p23.2b	Homo sapiens mitochondrial ribosomal protein L33 (MRPL33), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	C2orf1; RPL33L; MGC23922; MGC111093; MGC13694	C2orf1; RPL33L; MGC23922; MGC111093; MGC13694
Homo sapiens	RefSeq	XM_929565.1	ILMN_31938	LOC653765	XM_929565.1	XM_929565.1		653765	89027987	XM_929565.1	LOC653765	XP_934658.1	ILMN_1689623	0001010059	S	1396	TGTGCCGGTCCCTCCTCATTGCCTCTGTTGACTCTGCTCCACCCAGAGAA	8	-	21686027-21686076		PREDICTED: Homo sapiens similar to GDNF family receptor alpha 2 precursor (GFR-alpha 2) (Neurturin receptor alpha) (NTNR-alpha) (NRTNR-alpha) (TGF-beta-related neurotrophic factor receptor 2) (GDNF receptor beta) (GDNFR-beta) (RET ligand 2) (LOC653765), mRNA.					
Homo sapiens	RefSeq	NM_014160.3	ILMN_30349	MKRN2	NM_014160.3	NM_014160.3		23609	32880198	NM_014160.3	MKRN2	NP_054879.3	ILMN_2056760	0000360753	S	2223	GGCACCCAAGGTTTCTGATTCTGACCCAGCAGTGGTCCTGAAGAGAGCTG	3	+	12599586-12599635	3p25.1d	Homo sapiens makorin ring finger protein 2 (MKRN2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11597136] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSPC070; RNF62	HSPC070; RNF62
Homo sapiens	RefSeq	XR_001421.1	ILMN_137407	TSPYL3	XR_001421.1	XR_001421.1		128854	89058028	XR_001421.1	TSPYL3		ILMN_1737360	0003870400	A	3864	GTTGGACTTCAGACTGGAAGCTGTGCCTGTGTTCTGCAAGGATAACCTCC				20q11.21b	PREDICTED: Homo sapiens TSPY-like 3 (pseudogene) (TSPYL3), misc RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]			
Homo sapiens	RefSeq	XM_001725243.1	ILMN_340228	LOC100132752	XM_001725243.1	XM_001725243.1		100132752	169166254	XM_001725243.1	LOC100132752	XP_001725295.1	ILMN_3239806	0002680671	S	1662	AGCACCCCGAAGGTCCTCCTTCACCGGGAACAGAATCAGGAGACCGATCA	4	+	132902647-132902696	4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100132752 (LOC100132752), mRNA.					
Homo sapiens	RefSeq	NR_029704.1	ILMN_387898	MIR154	NR_029704.1	NR_029704.1		406946	262205415	NR_029704.1	MIR154		ILMN_3308833	0004760114	S	16	GGTTATCCGTGTTGCCTTCGCTTTATTTGTGACGAATCATACACGGTTGA				14q32.31a	Homo sapiens microRNA 154 (MIR154), microRNA.					
Homo sapiens	RefSeq	NM_175929.1	ILMN_16171	FGF14	NM_175929.1	NM_175929.1		2259	28872755	NM_175929.1	FGF14	NP_787125.1	ILMN_1751495	0004260025	I	150	CAACCACAAGGATCTCTTCTTTCTCAGGGTGTCTAAGCTGCTGGATTGCT	13	-	101851926-101851975	13q33.1a-q33.1b	Homo sapiens fibroblast growth factor 14 (FGF14), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8790420] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8790420] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8790420] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8790420] [evidence TAS]	MGC119129; FHF4; SCA27	MGC119129; FHF4; SCA27
Homo sapiens	RefSeq	NM_032705.3	ILMN_6189	C1ORF97	NM_032705.3	NM_032705.3		84791	109627667	NM_032705.3	C1orf97	NP_116094.2	ILMN_2047354	0006020315	S	295	CAGCACCGATCCCGACATAGATCAGTGACGTCTTTTTCTTCAGATGATCC				1q32.3a	Homo sapiens chromosome 1 open reading frame 97 (C1orf97), mRNA.				MGC14801; FLJ27348; RP11-318L16.3; FLJ27347	MGC14801; FLJ27348; RP11-318L16.3; FLJ27347
Homo sapiens	RefSeq	NM_001001995.1	ILMN_23991	GPM6B	NM_001001995.1	NM_001001995.1		2824	50263047	NM_001001995.1	GPM6B	NP_001001995.1	ILMN_1704665	0003870202	I	2865	CCAGCAGTGGAGGTGCTGTCAGAGTCCAGTGTTCTAGAAGAGGCAGTGTC	X	-	13789363-13789412	Xp22.2	Homo sapiens glycoprotein M6B (GPM6B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8661015] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC17150; MGC54284; M6B	MGC54284; M6B; MGC17150
Homo sapiens	RefSeq	NM_001001994.1	ILMN_23991	GPM6B	NM_001001995.1	NM_001001995.1		2824	50263047	NM_001001995.1	GPM6B	NP_001001995.1	ILMN_1735438	0002630279	A	1066	TACATGTCCTATCACCTGTTCATTGTGGCCTGTGCAGGAGCTGGTGCCAC	X	-	13794369-13794418	Xp22.2	Homo sapiens glycoprotein M6B (GPM6B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8661015] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC17150; MGC54284; M6B	MGC54284; M6B; MGC17150
Homo sapiens	RefSeq	NM_152495.1	ILMN_1447	CNIH3	NM_152495.1	NM_152495.1		149111	22749038	NM_152495.1	CNIH3	NP_689708.1	ILMN_1749071	0002030598	S	1970	AGCTCAGAAAATCCTGTGGAGTGGCTGCTCTGTACCGTGGGCATCCGGCA	1	+	222994470-222994519	1q42.12a	Homo sapiens cornichon homolog 3 (Drosophila) (CNIH3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		FLJ38993	FLJ38993
Homo sapiens	Unigene	Hs.578356	ILMN_130537	HS.578356	Hs.578356		Hs.578356		11650969	BF577257			ILMN_1881192	0001410059	S	520	CACAAAGGCATGGACATCAGGAAGCAGGAATCACTGGGGGTCACTCTAGG	14	+	74828203-74828252		602135270F1 NIH_MGC_81 Homo sapiens cDNA clone IMAGE:4290208 5, mRNA sequence					
Homo sapiens	RefSeq	NM_152344.1	ILMN_1510	LSM12	NM_152344.1	NM_152344.1		124801	22748746	NM_152344.1	LSM12	NP_689557.1	ILMN_2092693	0002750709	S	1902	CTAACCTGCTGAGAGCTAAAATTGGCACCCATTGCCCCGTGCCTTCAGGC	17	-	39467788-39467837	17q21.31c	Homo sapiens LSM12 homolog (S. cerevisiae) (LSM12), mRNA.				FLJ30656; MGC104211	FLJ30656; MGC104211
Homo sapiens	RefSeq	XM_941746.1	ILMN_38512	KIAA0258	XM_941746.1	XM_941746.1		9827	89030244	XM_941746.1	KIAA0258	XP_946839.1	ILMN_1697000	0003890215	A	2370	GTTTCCCACAGGTTCTGGAGGAGCCCAGGATGGATTATTGAGAGCATGGG				9p13.3a	PREDICTED: Homo sapiens KIAA0258, transcript variant 3 (KIAA0258), mRNA.					
Homo sapiens	Unigene	Hs.547366	ILMN_109512	HS.547366	Hs.547366		Hs.547366		18988531	BM678635			ILMN_1912387	0004010220	S	636	CAAGGCTTCAGGCTGATTCTTATACTGTTGTTAAAGCAGCCCTCCCGTGC	12	+	93938754-93938800:93938820-93938822		UI-E-EO0-ahw-b-19-0-UI.s1 UI-E-EO0 Homo sapiens cDNA clone UI-E-EO0-ahw-b-19-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_941108.1	ILMN_165807	LOC732206	XM_001134321.1	XM_001134321.1		732206	113427601	XM_001134321.1	LOC732206	XP_001134321.1	ILMN_1752883	0004480692	S	1810	TCGACTGGCCCATCTGAAGTCCTCCTCCACGAGAGCCCAGGAAAGGGAGA					PREDICTED: Homo sapiens similar to testis specific protein, Ddc8 (LOC732206), mRNA.					
Homo sapiens	RefSeq	NM_133486.1	ILMN_18639	MBNL3	NM_133486.1	NM_133486.1		55796	30315648	NM_133486.1	MBNL3	NP_597846.1	ILMN_2303170	0002810576	A	1115	CAGCAGAGTTATGGAGTATCAGAATCTTTCCATGGAAACCTCCATATGGC	X	-	131513642-131513691	Xq26.2a	Homo sapiens muscleblind-like 3 (Drosophila) (MBNL3), transcript variant R, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MBLX39; MBLX; FLJ11316; CHCR; MBXL	MBLX39; MBLX; FLJ11316; CHCR; MBXL
Homo sapiens	RefSeq	NM_133486.1	ILMN_18639	MBNL3	NM_133486.1	NM_133486.1		55796	30315648	NM_133486.1	MBNL3	NP_597846.1	ILMN_2303166	0006940736	A	914	GCACCCGCTTCAAATATTGTGCCCATGATGCACGGTGCTACACCTACCAC	X	-	131516269-131516300:131518691-131518708	Xq26.2a	Homo sapiens muscleblind-like 3 (Drosophila) (MBNL3), transcript variant R, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MBLX39; MBLX; FLJ11316; CHCR; MBXL	MBLX39; MBLX; FLJ11316; CHCR; MBXL
Homo sapiens	RefSeq	XR_038771.1	ILMN_337852	LOC389141	XR_038771.1	XR_038771.1		389141	169165547	XR_038771.1	LOC389141		ILMN_3202626	0000520338	A	392	CTCCTGGAAACTTCACTAACCAGATCCACAGCTTCTTGTGGTTACTAACC				3q13.13c	PREDICTED: Homo sapiens misc_RNA (LOC389141), miscRNA.					
Homo sapiens	RefSeq	NM_001025366.1	ILMN_25305	VEGFA	NM_001025367.1	NM_001025367.1		7422	71051578	NM_001025367.1	VEGFA	NP_001020538.2	ILMN_1803882	0002900593	A	3115	ATTTAATTTTGCTAACACTCAGCTCTGCCCTCCCCGATCCCCTGGCTCCC	6	+	43753753-43753802	6p21.1c	Homo sapiens vascular endothelial growth factor A (VEGFA), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9684805] [evidence EXP]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 14570917] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16490744] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 17470632] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 9684805] [evidence EXP]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 11427521] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [pmid 15015550] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 16490744] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 9202027] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence ISS]; Any process that activates or increases the frequency, rate, or extent of leukocyte migration [goid 2687] [pmid 1312256] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 15351965] [evidence TAS]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 10527820] [evidence IDA]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 7929439] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [pmid 7929439] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [pmid 1312256] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 10066377] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 11461089] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43536] [pmid 9202027] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 17470632] [evidence IDA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [pmid 12744932] [evidence NAS]	Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [pmid 14570917] [evidence IDA]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 17470632] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 15001987] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with vascular endothelial growth factor receptor 1 [goid 43183] [pmid 1312256] [evidence IPI]; Interacting selectively with vascular endothelial growth factor receptor 2 [goid 43184] [pmid 1417831] [evidence IPI]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 17470632] [evidence IDA]; Interacting selectively with a component of the extracellular matrix [goid 50840] [pmid 14570917] [evidence IC ]	VPF; VEGF-A; MGC70609; VEGF	VPF; VEGF-A; MGC70609; VEGF
Homo sapiens	RefSeq	NM_005027.2	ILMN_166328	PIK3R2	NM_005027.2	NM_005027.2		5296	48976048	NM_005027.2	PIK3R2	NP_005018.1	ILMN_1726565	0002140097	S	3817	TTTGGGACAAGAGCCCTGGTTTTCTACGCTGCCCTTGGCCACCACACTGC	19	+	18142222-18142271	19p13.11c	Homo sapiens phosphoinositide-3-kinase, regulatory subunit 2 (beta) (PIK3R2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12660731] [evidence EXP]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of anti-apoptosis [goid 19987] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence IEA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12029088] [evidence IPI]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [evidence ISS]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]	p85-BETA; P85B	p85; p85-BETA; P85B
Homo sapiens	RefSeq	NM_014636.1	ILMN_27941	RALGPS1	NM_014636.1	NM_014636.1		9649	7662069	NM_014636.1	RALGPS1	NP_055451.1	ILMN_1674135	0000990280	S	6134	CGTCTCACCCGCAGTAACCACTGAACGTCAATCAGCCCTCCATGGGGTTC	9	+	129025062-129025111	9q33.3b	Homo sapiens Ral GEF with PH domain and SH3 binding motif 1 (RALGPS1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	KIAA0351; RALGPS1A; RP13-225O21.1; RALGEF2	KIAA0351; RALGPS1A; RP13-225O21.1; RALGEF2
Homo sapiens	Unigene	Hs.31961	ILMN_72315	HS.31961	Hs.31961		Hs.31961		21754193	AK095013			ILMN_1816603	0002490564	S	3499	CTGAGGTTATGTACAACCAACTCTCAGAATTCAGACTTCCTGCAGCTGCC	2	-	40178460-40178509		Homo sapiens cDNA FLJ37694 fis, clone BRHIP2015224					
Homo sapiens	RefSeq	XM_940892.1	ILMN_37206	LOC651686	XM_940892.1	XM_940892.1		651686	88981386	XM_940892.1	LOC651686	XP_945985.1	ILMN_1678398	0001990242	S	2	TGGGCAGCTGGATGCTTTCGAGCAGGAGTGATACAGACGTCATTTCAGAG					PREDICTED: Homo sapiens similar to Papilin CG33103-PA, isoform A (LOC651686), mRNA.					
Homo sapiens	RefSeq	NM_173522.1	ILMN_14255	CXORF42	NM_173522.1	NM_173522.1		158801	27734962	NM_173522.1	CXorf42	NP_775793.1	ILMN_1668927	0002760091	S	1878	GCCCTGTCTTGAAACACACTGTTCTTTTACTAGGGACTTTCCCCACCCCC	X	-	119254795-119254844	Xq24d	Homo sapiens chromosome X open reading frame 42 (CXorf42), mRNA.				DKFZp686B1195; FLJ36576	DKFZp686B1195; FLJ36576
Homo sapiens	Unigene	Hs.548213	ILMN_109801	HS.548213	Hs.548213		Hs.548213		4682317	AI630987			ILMN_1865639	0002230327	S	337	GCAGGTGCAGGGGCAGGAGGAAAAGGAGCAGTTGGAGGCGAAAGAGACAA	1	-	146194447-146194496		tx54c03.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2273380 3, mRNA sequence					
Homo sapiens	RefSeq	XM_942035.1	ILMN_44770	LOC652545	XM_942035.1	XM_942035.1		652545	89063027	XM_942035.1	LOC652545	XP_947128.1	ILMN_1810433	0001190070	S	256	GGAAGGACCCGGTTTCAGGAGCTGCTGTCCAGTCCGGCCTACAGAGCCAG					PREDICTED: Homo sapiens similar to Protein C21orf70 homolog (LOC652545), mRNA.					
Homo sapiens	RefSeq	NM_014971.1	ILMN_365840	EFR3B	NM_014971.1	NM_014971.1		22979	190684709	NM_014971.1	EFR3B	NP_055786.1	ILMN_3245346	0000520707	S	7319	TTAGGGAAGTGGGAAAGGCGGAGTGGGGGGAAGTATAGGAAGAAGGATTC	2	+	25381865-25381914	2p23.3c	Homo sapiens EFR3 homolog B (S. cerevisiae) (EFR3B), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_152451.3	ILMN_20122	GCOM1	NM_152451.3	NM_152451.3		145781	70166480	NM_152451.3	Gcom1	NP_689664.2	ILMN_1795702	0001780674	I	2190	CCCCCGCCAACTCTGTAAACCCCAAGTATAACACAGGACGTTGCTATTTG	15	+	55785917-55785966	15q21.3d	Homo sapiens GRINL1A combined protein (Gcom1), transcript variant 8, mRNA.				Gup2; Gup1; MGC126694; GRINL1A; Gcom2; FLJ30973	Gup2; Gup1; MGC126694; GRINL1A; Gcom2; FLJ30973
Homo sapiens	RefSeq	NM_183041.1	ILMN_16472	DTNBP1	NM_032122.3	NM_032122.3		84062	34304371	NM_032122.3	DTNBP1	NP_115498.2	ILMN_1783806	0006590731	A	875	TGGACATGCTGGAGCAGATGGACCTGATGGACATATCGGACCAGGAGGCC	6	-	15652356-15652371:15663045-15663078	6p22.3f	Homo sapiens dystrobrevin binding protein 1 (DTNBP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence ISS]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence ISS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15102850] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC20210; DKFZP564K192; SDY; FLJ30031; DBND; HPS7; My031	MGC20210; DKFZP564K192; SDY; FLJ30031; DBND; HPS7; My031
Homo sapiens	RefSeq	NM_018455.3	ILMN_10665	CENPN	NM_018455.3	NM_018455.3		55839	39725678	NM_018455.3	CENPN	NP_060925.1	ILMN_1720526	0006550373	S	1220	TTCACGTCCTCCTCCATGCTGAGGCGCAATACACCGCTTCTGGGTCAGGA	16	+	79611335-79611382:79613861-79613862	16q23.2b	Homo sapiens centromere protein N (CENPN), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]			FLJ22660; C16orf60; CENP-N; FLJ13607; BM039	FLJ22660; C16orf60; CENP-N; FLJ13607; BM039
Homo sapiens	RefSeq	NM_017846.3	ILMN_165201	TRNAU1AP	NR_003109.1	NR_003109.1		54952	111154072	NR_003109.1	TRNAU1AP		ILMN_1732722	0000010626	S	1544	TCTAGCAGGTGTGGTAGGAGCACGCCCCAGAAGGTAGAATGTGGTGGGGT	1	+	28777173-28777222	1p35.3b	Homo sapiens tRNA selenocysteine 1 associated protein 1 (TRNAU1AP), transcript variant 2, transcribed RNA.				SECP43; RP4-669K10.4; PRO1902; FLJ20503	PRO1902; FLJ20503; RP4-669K10.4; SECP43
Homo sapiens	RefSeq	NR_003109.1	ILMN_165201	TRNAU1AP	NR_003109.1	NR_003109.1		54952	111154072	NR_003109.1	TRNAU1AP		ILMN_2365410	0002060180	A	1382	CTGGGATGAGCAGCTTGGGATAATTCACACACTAAAGCCTGAGTTCAAGG	1	+	28777011-28777060	1p35.3b	Homo sapiens tRNA selenocysteine 1 associated protein 1 (TRNAU1AP), transcript variant 2, transcribed RNA.				SECP43; RP4-669K10.4; PRO1902; FLJ20503	PRO1902; FLJ20503; SECP43; RP4-669K10.4
Homo sapiens	RefSeq	NM_001256.2	ILMN_1141	CDC27	NM_001256.2	NM_001256.2		996	16554576	NM_001256.2	CDC27	NP_001247.2	ILMN_1746533	0006550537	S	2799	GGCTCTTTTACCAGTATGAATGACAATTTATGGGGGGTAGGGTGGGGAAC	17	-	42553053-42553102	17q21.32a	Homo sapiens cell division cycle 27 homolog (S. cerevisiae) (CDC27), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 7736578] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [pmid 7736578] [evidence IDA]	The cell cycle process whereby a cell progresses from metaphase to anaphase during mitosis, triggered by the destruction of mitotic cyclins [goid 7091] [pmid 7736578] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7736578] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16648845] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17719540] [evidence IPI]	D17S978E; HNUC; APC3; D0S1430E; CDC27Hs	D17S978E; HNUC; APC3; D0S1430E; CDC27Hs
Homo sapiens	RefSeq	NM_145897.2	ILMN_32234	PFDN5	NM_145897.2	NM_145897.2		5204	88999579	NM_145897.2	PFDN5	NP_665904.1	ILMN_2356284	0004220630	A	234	CGATGTGGGAACTGGGTACTATGTAGAGAAGACAGCTGAGGATGCCAAGG	12	+	51977945-51977975:51978096-51978114	12q13.13e	Homo sapiens prefoldin subunit 5 (PFDN5), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9792694] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9792694] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9792694] [evidence TAS]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	MM-1; MGC71907; MGC5329; MM1; PFD5	MM-1; MGC71907; MGC5329; MM1; PFD5
Homo sapiens	Unigene	Hs.545716	ILMN_108854	HS.545716	Hs.545716		Hs.545716		5528415	AI864308			ILMN_1838504	0000050707	S	67	GGATGAGCTGACTGCATCTGAGTTGTTCAGGATCATGTATAGGTTGTGAC	9	-	87743434-87743483		wg78b05.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:2371185 3, mRNA sequence					
Homo sapiens	RefSeq	NM_052970.3	ILMN_183210	HSPA12B	NM_052970.3	NM_052970.3		116835	31317302	NM_052970.3	HSPA12B	NP_443202.3	ILMN_1676897	0006330575	S	2932	GAGGGGTGGTCCCAGCTCTGCTATTGACTCGGTATGCCTTTAGGACATTC	20	+	3681581-3681630	20p13b	Homo sapiens heat shock 70kD protein 12B (HSPA12B), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	dJ1009E24.2; FLJ32150; C20orf60; MGC131912	dJ1009E24.2; C20orf60; MGC131912; FLJ32150
Homo sapiens	RefSeq	XM_935785.1	ILMN_32843	LOC642005	XM_935785.1	XM_935785.1		642005	89026951	XM_935785.1	LOC642005	XP_940878.1	ILMN_1666848	0001260114	S	181	AAATGTGAAGAATGTGCCGAAGGCTTCAACCAGGGCTCACATCTCACTGA					PREDICTED: Homo sapiens similar to zinc finger protein 682 (LOC642005), mRNA.					
Homo sapiens	RefSeq	XM_001713704.1	ILMN_340481	LOC100133905	XM_001713704.1	XM_001713704.1		100133905	169178335	XM_001713704.1	LOC100133905	XP_001713756.1	ILMN_3240043	0002030181	S	3322	CCCCTAGAAGGTGCAAGTTGACTATACATCATTAGCAGACATTCATTAAC					PREDICTED: Homo sapiens hypothetical protein LOC100133905 (LOC100133905), mRNA.					
Homo sapiens	RefSeq	XR_040899.1	ILMN_337242	C18ORF12	XR_040899.1	XR_040899.1		84322	169212786	XR_040899.1	C18orf12		ILMN_3179127	0001440132	A	405	GTCATTCTGGATGATGTGGCGTGACCTCACACTGATGCCATTCCCCTCCC	18	+	44033074-44033123	18q21.1d	PREDICTED: Homo sapiens chromosome 18 open reading frame 12 (C18orf12), miscRNA.					
Homo sapiens	RefSeq	NM_001013639.1	ILMN_18498	LOC388438	NM_001013639.1	NM_001013639.1		388438	61966726	NM_001013639.1	LOC388438	NP_001013661.1	ILMN_1719851	0002230280	S	3698	CTGTCATTAGACCCACCTGCCCTCACCCTGGCCTGCACCCTTCAATCTAC					Homo sapiens hypothetical LOC388438 (LOC388438), mRNA.					
Homo sapiens	RefSeq	NM_005857.2	ILMN_176597	ZMPSTE24	NM_005857.3	NM_005857.3		10269	122939168	NM_005857.3	ZMPSTE24	NP_005848.2	ILMN_1656413	0005390543	S	2872	GGGATCAACTGTACGCCTTTGGTATCTGACCATAAAGTCTTTTGCTCCGC	1	+	40532161-40532210	1p34.2d	Homo sapiens zinc metallopeptidase (STE24 homolog, S. cerevisiae) (ZMPSTE24), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10373325] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [pmid 10373325] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14968; STE24; FACE-1; Ste24p; FACE1	FLJ14968; STE24; MADB; FACE-1; Ste24p; FACE1
Homo sapiens	RefSeq	NM_021173.2	ILMN_14887	POLD4	NM_021173.2	NM_021173.2		57804	47271453	NM_021173.2	POLD4	NP_066996.2	ILMN_1803772	0001050240	S	604	GGTGTCAGAGGCTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCC	11	-	66875859-66875908	11q13.1f	Homo sapiens polymerase (DNA-directed), delta 4 (POLD4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10751307] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10559261] [evidence EXP]	Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 10751307] [evidence TAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 10751307] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15670210] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	p12; POLDS	p12; POLDS
Homo sapiens	RefSeq	XM_001719929.1	ILMN_352075	LOC100133758	XM_001719929.1	XM_001719929.1		100133758	169218105	XM_001719929.1	LOC100133758	XP_001719981.1	ILMN_3248828	0002030156	S	1216	CAGAAGGAGCAGATGCGGGAGCAGGAGGAGCAAATGGGGGAGCAGAAGGA					PREDICTED: Homo sapiens hypothetical LOC100133758 (LOC100133758), partial mRNA.					
Homo sapiens	RefSeq	XM_001727022.1	ILMN_341191	LOC100128525	XM_001727022.1	XM_001727022.1		100128525	169216053	XM_001727022.1	LOC100128525	XP_001727074.1	ILMN_3183789	0002230349	A	492	CCCCTGTTTGTACGTCATAGAACCCAGAAGGAAATTAAGCAGGAAGCTGC				22q13.1d	PREDICTED: Homo sapiens similar to hCG1641472 (LOC100128525), mRNA.					
Homo sapiens	RefSeq	NM_030758.3	ILMN_6048	OSBP2	NM_030758.3	NM_030758.3		23762	75905817	NM_030758.3	OSBP2	NP_110385.1	ILMN_1781966	0003780100	S	4029	GGCCACTGACCCAGCCCCTCAGAATCCCACACTCCAATCCTTTCCATTTC	22	+	29633500-29633549	22q12.2b-q12.2c	Homo sapiens oxysterol binding protein 2 (OSBP2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]		ORP-4; OSBPL1; ORP4; OSBPL4	ORP-4; OSBPL1; ORP4; OSBPL4
Homo sapiens	RefSeq	NM_024911.4	ILMN_3521	GPR177	NM_024911.4	NM_024911.4		79971	50541968	NM_024911.4	GPR177	NP_079187.3	ILMN_2283325	0004250711	I	2305	CCTTTGCGGTCCCAGTCCAAGGTAGGCTGGTGTCATAGTCTTCTCACTCC	1	-	68591451-68591500	1p31.3a	Homo sapiens G protein-coupled receptor 177 (GPR177), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence ISS]	FLJ23091; C1orf139; WLS; EVI; MGC131760; MRP; MGC14878	FLJ23091; C1orf139; WLS; EVI; MGC131760; MRP; MGC14878
Homo sapiens	RefSeq	NM_024911.4	ILMN_3521	GPR177	NM_024911.4	NM_024911.4		79971	50541968	NM_024911.4	GPR177	NP_079187.3	ILMN_1753913	0006220075	I	1858	TGAGATCTACAAGTTGACCCGCAAGGAGGCCCAGGAGTAGGAGGCTGCAG	1	-	68591898-68591908:68591909-68591947	1p31.3a	Homo sapiens G protein-coupled receptor 177 (GPR177), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence ISS]	FLJ23091; C1orf139; WLS; EVI; MGC131760; MRP; MGC14878	FLJ23091; C1orf139; WLS; EVI; MGC131760; MRP; MGC14878
Homo sapiens	RefSeq	NM_015379.3	ILMN_27636	BRI3	NM_015379.3	NM_015379.3		25798	48928020	NM_015379.3	BRI3	NP_056194.1	ILMN_1781580	0006270095	S	426	TCCCCTTTGGGTTCATTTGCTGTTTTGCCTTGAGGAAGCGACGATGCCCC	7	+	97758418-97758467	7q21.3d	Homo sapiens brain protein I3 (BRI3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			I3	I3
Homo sapiens	RefSeq	XM_940419.1	ILMN_32484	LOC651291	XM_940419.1	XM_940419.1		651291	89061932	XM_940419.1	LOC651291	XP_945512.1	ILMN_1712967	0003800113	S	20	CCTCAGCCAGGCTGCCACCTCGCAGATGGATTTCAGACTGTTGTGCTAGC					PREDICTED: Homo sapiens hypothetical protein LOC651291 (LOC651291), mRNA.					
Homo sapiens	RefSeq	NM_033326.2	ILMN_19155	SOX6	NM_033326.2	NM_033326.2		55553	71037388	NM_033326.2	SOX6	NP_201583.2	ILMN_2256687	0005130551	I	1068	ACCAAAGGCTAAAGGGCCTAAGTGACCGTTTTGGCAGGAATTTGGACACC	11	-	16074162-16074211	11p15.2a-p15.1e	Homo sapiens SRY (sex determining region Y)-box 6 (SOX6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1614875] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell that will form part of the cardiac organ of an individual [goid 35051] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [pmid 1614875] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1614875] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 11255018] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1614875] [evidence NAS]	HSSOX6	HSSOX6
Homo sapiens	RefSeq	XM_939284.1	ILMN_38039	LOC650200	XM_939284.2	XM_939284.2		650200	113419119	XM_939284.2	LOC650200	XP_944377.2	ILMN_1741597	0000150142	S	529	CGCCTCACCTGAGCCTGGGATACCGAAGGACCTGTTCGAAGTATTTACTG					PREDICTED: Homo sapiens similar to Nuclear protein 1 (Protein p8) (Candidate of metastasis 1) (LOC650200), mRNA.					
Homo sapiens	RefSeq	XM_001714119.1	ILMN_349063	LOC100131330	XM_001714119.1	XM_001714119.1		100131330	169171571	XM_001714119.1	LOC100131330	XP_001714171.1	ILMN_3246783	0003710070	S	918	GTCCATGGCCTGTTAGGAACCAGAACACACAGCAGGATGTGAGCAGCGGG					PREDICTED: Homo sapiens similar to Family with sequence similarity 139, member A (LOC100131330), mRNA.					
Homo sapiens	RefSeq	NM_001307.3	ILMN_13755	CLDN7	NM_001307.3	NM_001307.3		1366	34222214	NM_001307.3	CLDN7	NP_001298.2	ILMN_2143685	0005080373	S	1004	CTGGGTACCGTGCACCCCGCTCTTACCCTAAGTCCAACTCTTCCAAGGAG	17	-	7104426-7104475	17p13.1d	Homo sapiens claudin 7 (CLDN7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9892664] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	claudin-1; CPETRL2; Hs.84359; CEPTRL2	claudin-1; CPETRL2; Hs.84359; CEPTRL2
Homo sapiens	RefSeq	XM_938283.1	ILMN_34545	C17ORF68	XM_938283.1	XM_938283.1		80169	89042297	XM_938283.1	C17orf68	XP_943376.1	ILMN_1772296	0004210286	I	4502	CTGACCCTCTGCTGTTATCCGGAAGTTTCTACCCGGAGCCAGTTGCCTTC				17p13.1c	PREDICTED: Homo sapiens chromosome 17 open reading frame 68 (C17orf68), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.578785	ILMN_130966	HS.578785	Hs.578785		Hs.578785		9878460	AV657446			ILMN_1880359	0002100102	S	109	AGATGAGTCCAGCAGGGGCAGGTTGCGGTGGAATGGCCCCAACTCAGACA	16	-	49717542-49717591		AV657446 GLC Homo sapiens cDNA clone GLCFCA04 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015893.1	ILMN_6345	PRLH	NM_015893.1	NM_015893.1		51052	7705679	NM_015893.1	PRLH	NP_056977.1	ILMN_1758266	0005820639	S	87	CATGGAGATCCGCACCCCTGACATCAATCCTGCCTGGTACGCCAGTCGCG	2	+	238140042-238140055:238140394-238140429	2q37.3b	Homo sapiens prolactin releasing hormone (PRLH), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 9607765] [evidence TAS]	PRH	PRH
Homo sapiens	RefSeq	NM_000584.2	ILMN_179575	IL8	NM_000584.2	NM_000584.2		3576	28610153	NM_000584.2	IL8	NP_000575.1	ILMN_1666733	0001570553	S	868	CCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGG	4	+	74608648-74608697	4q13.3d	Homo sapiens interleukin 8 (IL8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10823949] [evidence TAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 11483765] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10820279] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10620615] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 11483765] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 11564821] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8381837] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10734056] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10881932] [evidence IC ]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9551928] [evidence TAS]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 11877327] [evidence TAS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [pmid 2007144] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [pmid 11564821] [evidence IGI]; The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42119] [pmid 11483765] [evidence TAS]; Any process that modulates the frequency, rate or extent of retroviral genome replication [goid 45091] [pmid 11483765] [evidence IDA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [pmid 11564821] [evidence IGI]	Interacting selectively with the interleukin-8 receptor [goid 5153] [pmid 1840701] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10880251] [evidence IPI]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10881932] [evidence TAS]	GCP-1; MDNCF; NAP1; CXCL8; AMCF-I; TSG-1; LYNAP; NAP-1; MONAP; GCP1; SCYB8; LUCT; K60; LECT; 3-10C; b-ENAP; NAF	GCP-1; MDNCF; NAP1; CXCL8; AMCF-I; IL-8; TSG-1; NAP-1; LYNAP; MONAP; SCYB8; GCP1; LUCT; LECT; K60; 3-10C; b-ENAP; NAF
Homo sapiens	RefSeq	NM_000584.2	ILMN_179575	IL8	NM_000584.2	NM_000584.2		3576	28610153	NM_000584.2	IL8	NP_000575.1	ILMN_2184373	0001980309	S	1345	CCCAGTCTTGTCATTGCCAGCTGTGTTGGTAGTGCTGTGTTGAATTACGG	4	+	74609125-74609174	4q13.3d	Homo sapiens interleukin 8 (IL8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10823949] [evidence TAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 11483765] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10820279] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10620615] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 11483765] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 11564821] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8381837] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10734056] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10881932] [evidence IC ]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9551928] [evidence TAS]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 11877327] [evidence TAS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [pmid 2007144] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [pmid 11564821] [evidence IGI]; The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42119] [pmid 11483765] [evidence TAS]; Any process that modulates the frequency, rate or extent of retroviral genome replication [goid 45091] [pmid 11483765] [evidence IDA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [pmid 11564821] [evidence IGI]	Interacting selectively with the interleukin-8 receptor [goid 5153] [pmid 1840701] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10880251] [evidence IPI]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10881932] [evidence TAS]	GCP-1; MDNCF; NAP1; CXCL8; AMCF-I; TSG-1; LYNAP; NAP-1; MONAP; GCP1; SCYB8; LUCT; K60; LECT; 3-10C; b-ENAP; NAF	GCP-1; MDNCF; NAP1; CXCL8; AMCF-I; TSG-1; NAP-1; LYNAP; MONAP; SCYB8; GCP1; LUCT; LECT; K60; 3-10C; b-ENAP; NAF
Homo sapiens	RefSeq	XR_038204.1	ILMN_341310	LOC100130127	XR_038204.1	XR_038204.1		100130127	169191343	XR_038204.1	LOC100130127		ILMN_3183936	0006580161	A	958	AATAGGAAACAGCGCCTCCTCATCCAAGACAGGTGGAAAAGGGCCCAGCG	10	+	5858197-5858246	10p15.1b	PREDICTED: Homo sapiens misc_RNA (LOC100130127), miscRNA.					
Homo sapiens	RefSeq	NM_016601.2	ILMN_11531	KCNK9	NM_016601.2	NM_016601.2		51305	16445406	NM_016601.2	KCNK9	NP_057685.1	ILMN_1664919	0004040309	S	1176	GGAAGTCCGTTTAGGGGAACTAACTGCACATTCAAGAGAGGCGTCCGTGG	8	-	140699993-140700042	8q24.3a-q24.3b	Homo sapiens potassium channel, subfamily K, member 9 (KCNK9), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 11042359] [evidence NAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence NAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KT3.2; K2p9.1; MGC138270; MGC138268; TASK-3; TASK3	KT3.2; K2p9.1; MGC138270; MGC138268; TASK-3; TASK3
Homo sapiens	Unigene	Hs.540819	ILMN_105372	HS.540819	Hs.540819		Hs.540819		5876233	AW022703			ILMN_1860168	0006560743	S	314	GTGGGGGATGGGTGGGTTCATCATCTATTCTTCAGGTCATGTTCTCAAGA	17	-	60332695-60332731:60332757-60332769		df42e10.y1 Morton Fetal Cochlea Homo sapiens cDNA clone IMAGE:2486107 5, mRNA sequence					
Homo sapiens	RefSeq	NR_003927.1	ILMN_336531	UOX	NR_003927.1	NR_003927.1		391051	157412274	NR_003927.1	UOX		ILMN_3249654	0005490010	S	1078	CAAGACTGTGACATTGTGGCCACCAATAGGAGTCCACTCTCAGCTGAGGA	1	-	84831064-84831113	1p31.1a	Homo sapiens urate oxidase (pseudogene) (UOX), non-coding RNA.				UOXP	UOXP
Homo sapiens	RefSeq	NM_005074.1	ILMN_13403	SLC17A1	NM_005074.2	NM_005074.2		6568	142378869	NM_005074.2	SLC17A1	NP_005065.1	ILMN_1722716	0006480382	S	1428	GAGCACTTGCAGAGCCTGGGACAACCTCCTTATTGAAGGGAAGAGGGACC				6p22.2a	Homo sapiens solute carrier family 17 (sodium phosphate), member 1 (SLC17A1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8288239] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8288239] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [pmid 8867793] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA];  [goid 15321] [pmid 8867793] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC126796; NPT-1; NPT1; NAPI-1; MGC126794	MGC126796; NPT-1; NPT1; NAPI-1; MGC126794
Homo sapiens	RefSeq	NM_001139505.1	ILMN_369856	LOC729402	NM_001139505.1	NM_001139505.1		729402	213385310	NM_001139505.1	LOC729402	NP_001132977.1	ILMN_3297130	0001300215	M	1	GTCTGCCTCAGCTCAAGAATGAACTTTCCCTTTCGGCCGGAACCGCCATC				10q26.12a	Homo sapiens ribosomal protein L21-like (LOC729402), mRNA.					
Homo sapiens	RefSeq	NM_001003791.1	ILMN_14430	ERLIN2	NM_001003791.1	NM_001003791.1		11160	51242965	NM_001003791.1	ERLIN2	NP_001003791.1	ILMN_2378664	0003130048	A	150	ACATATTGGGGTATATTACAGAGGCGGTGCCCTGCTGACTTCGACCAGCG	8	+	37714685-37714705:37717041-37717069	8p12a	Homo sapiens ER lipid raft associated 2 (ERLIN2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 16835267] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C8orf2; MGC87072; Erlin-2; SPFH2	C8orf2; MGC87072; Erlin-2; SPFH2
Homo sapiens	RefSeq	NM_001003790.1	ILMN_14430	ERLIN2	NM_001003791.1	NM_001003791.1		11160	51242965	NM_001003791.1	ERLIN2	NP_001003791.1	ILMN_1669729	0000870646	A	151	CATATTGGGGTATATTACAGAGGCGGTGCCCTGCTGACTTCGACCAGCGG	8	+	37714686-37714705:37717041-37717070	8p12a	Homo sapiens ER lipid raft associated 2 (ERLIN2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 16835267] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C8orf2; MGC87072; Erlin-2; SPFH2	C8orf2; MGC87072; Erlin-2; SPFH2
Homo sapiens	RefSeq	NM_001002262.1	ILMN_3015	ZFYVE27	NM_001002262.1	NM_001002262.1		118813	50557647	NM_001002262.1	ZFYVE27	NP_001002262.1	ILMN_1793621	0000840653	A	2599	GTGGCACAAGTAATGGGATGAGGAGGAATTGGGGGTGGGGGTCTTCTACC	10	+	99510236-99510285	10q24.2a	Homo sapiens zinc finger, FYVE domain containing 27 (ZFYVE27), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SPG33; RP11-459F3.2	SPG33; RP11-459F3.2
Homo sapiens	RefSeq	XM_934135.1	ILMN_181326	LOC644035	XR_017513.1	XR_017513.1		644035	113426134	XR_017513.1	LOC644035		ILMN_1720140	0004200288	I	74	CCAGGTTAGAGGGAAGTGGGAGGCACTTTGCTGTCTTCAATCGAAGTTGA	16	-	68349351-68349400	16q22.1e	PREDICTED: Homo sapiens hypothetical LOC644035 (LOC644035), mRNA.					
Homo sapiens	RefSeq	XM_929967.1	ILMN_181326	LOC644035	XR_017513.1	XR_017513.1		644035	113426134	XR_017513.1	LOC644035		ILMN_1682085	0002260026	A	279	GCTTTGACTATTTGGCCTGAAGAATTTTAGAAAACCAGGAGAGAAGACCT	16	-	68349146-68349195	16q22.1e	PREDICTED: Homo sapiens hypothetical LOC644035 (LOC644035), mRNA.					
Homo sapiens	RefSeq	NM_054111.2	ILMN_18456	IHPK3	NM_054111.3	NM_054111.3		117283	78191796	NM_054111.3	IHPK3	NP_473452.2	ILMN_1738268	0004050427	S	2279	TTCCCCATTCTGCCACATTCTGACCATGAGACGCGGCTTGCAGTGGGGGT	6	-	33797706-33797755	6p21.31f	Homo sapiens inositol hexaphosphate kinase 3 (IHPK3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11502751] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 11502751] [evidence IDA]; The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 46488] [pmid 11502751] [evidence IDA]	Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [pmid 11502751] [evidence IDA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	IP6K3; MGC102928; INSP6K3	IP6K3; MGC102928; INSP6K3
Homo sapiens	RefSeq	NM_002767.2	ILMN_175219	PRPSAP2	NM_002767.2	NM_002767.2		5636	22538484	NM_002767.2	PRPSAP2	NP_002758.1	ILMN_2116661	0000290112	S	1457	AGATAGACCAACTTTTTATGTCGGTTTGGGTGTTTGTGAGTTTGGGGAGC	17	+	18772907-18772956	17p11.2e	Homo sapiens phosphoribosyl pyrophosphate synthetase-associated protein 2 (PRPSAP2), mRNA.		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 9545573] [evidence TAS]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]; Stops, prevents or reduces the activity of an enzyme [goid 4857] [pmid 9545573] [evidence TAS]	MGC126719; MGC117304; MGC126721; PAP41	MGC126719; MGC117304; MGC126721; PAP41
Homo sapiens	RefSeq	XM_928187.1	ILMN_31244	LOC221981	XM_928187.1	XM_928187.1		221981	89024690	XM_928187.1	LOC221981	XP_933280.1	ILMN_1762360	0001170646	A	4931	CCACCATGGAGGACAAAAGAGGAGATGTGAAAACCAGTCGGGCTGTACAT	7	-	11385288-11385337	7p21.3b	PREDICTED: Homo sapiens hypothetical protein LOC221981, transcript variant 2 (LOC221981), mRNA.					
Homo sapiens	RefSeq	NM_001013406.1	ILMN_15411	KRIT1	NM_001013406.1	NM_001013406.1		889	61742816	NM_001013406.1	KRIT1	NP_001013424.1	ILMN_2323418	0002070706	A	2190	CAAAGGCAAGCCCCAGCAATCATAAAGTCATCCCTGTGTATGTAGGAGTG	7	-	91842547-91842596	7q21.2a	Homo sapiens KRIT1, ankyrin repeat containing (KRIT1), transcript variant 5, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 9285558] [evidence TAS]	Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [pmid 9285558] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16037064] [evidence IPI]	CCM1; CAM	CCM1; CAM
Homo sapiens	RefSeq	NM_001013406.1	ILMN_15411	KRIT1	NM_001013406.1	NM_001013406.1		889	61742816	NM_001013406.1	KRIT1	NP_001013424.1	ILMN_2323413	0007610477	A	4007	TCCCTTCATTCTAATGTCCTCAACTGTTACCAAATACCCTGTTGACTCCC	7	-	91828457-91828506	7q21.2a	Homo sapiens KRIT1, ankyrin repeat containing (KRIT1), transcript variant 5, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 9285558] [evidence TAS]	Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [pmid 9285558] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16037064] [evidence IPI]	CCM1; CAM	CCM1; CAM
Homo sapiens	RefSeq	XM_001724670.1	ILMN_338333	LOC729010	XM_001724670.1	XM_001724670.1		729010	169166213	XM_001724670.1	LOC729010	XP_001724722.1	ILMN_3238392	0002100458	S	605	AACACGCCCACTGATTTTACATTATGCTCCTACCACCCGGCAGCCTCTCC	4	+	119770924-119770949:119771043-119771066	4q26f	PREDICTED: Homo sapiens hypothetical LOC729010 (LOC729010), mRNA.					
Homo sapiens	RefSeq	NM_004301.3	ILMN_23280	ACTL6A	NM_004301.3	NM_004301.3		86	98985779	NM_004301.3	ACTL6A	NP_004292.1	ILMN_2328280	0005220358	A	1190	CATCAGACCAGGTCTCTATGGCAGTGTAATAGTGGCAGGAGGAAACACAC	3	+	179298999-179299008:179301141-179301180	3q26.33a	Homo sapiens actin-like 6A (ACTL6A), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IEA]; A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60) [goid 35267] [pmid 10966108] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 9845365] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9845365] [evidence TAS]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 9845365] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC5382; BAF53A; ACTL6	MGC5382; BAF53A; ACTL6
Homo sapiens	RefSeq	NM_145045.4	ILMN_26137	CCDC151	NM_145045.4	NM_145045.4		115948	117553612	NM_145045.4	CCDC151	NP_659482.3	ILMN_3246065	0006130047	S	2111	AGCTGGGTCCGCCCCGGCCTCAGAGTTGCGCAATAAATGTTACCGACCAT	19	-	11531273-11531322	19p13.2b	Homo sapiens coiled-coil domain containing 151 (CCDC151), mRNA.				FLJ31801	FLJ31801
Homo sapiens	RefSeq	NM_012159.1	ILMN_5116	FBXL21	NM_012159.2	NM_012159.2		26223	148922962	NM_012159.2	FBXL21	NP_036291.2	ILMN_1717252	0007610193	S	985	GGTCGTTCAGTCAGCAAAGTGGTTTTAGGACGGGTAGGTCTCAACTGTCC	5	+	135304918-135304967	5q31.1f	Homo sapiens F-box and leucine-rich repeat protein 21 (FBXL21), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]	FBXL3B; FBL3B; Fbl21; FBXL3P; MGC120237	FBXL3B; FBL3B; Fbl21; FBXL3P; MGC120237
Homo sapiens	RefSeq	NM_001025072.2	ILMN_26328	C3ORF17	NM_001025072.2	NM_001025072.2		25871	75812962	NM_001025072.2	C3orf17	NP_001020243.1	ILMN_2331658	0007550280	A	4393	GGATGCTAATCTACCATGTTGACTTCTGATAACCAGTTCCTGGAATGCCC	3	-	114204244-114204293	3q13.2b	Homo sapiens chromosome 3 open reading frame 17 (C3orf17), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP434F2021	DKFZP434F2021
Homo sapiens	RefSeq	NM_015412.3	ILMN_26328	C3ORF17	NM_001025072.2	NM_001025072.2		25871	75812962	NM_001025072.2	C3orf17	NP_001020243.1	ILMN_1688372	0006510424	A	4612	CATATAAGCCCTGGGTCGGGGGGTAACTGTGGGGATCACTGCCTGAGACA	3	-	114204025-114204074	3q13.2b	Homo sapiens chromosome 3 open reading frame 17 (C3orf17), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP434F2021	DKFZP434F2021
Homo sapiens	RefSeq	NM_001001966.1	ILMN_28479	OR14A16	NM_001001966.1	NM_001001966.1		284532	50233853	NM_001001966.1	OR14A16	NP_001001966.1	ILMN_1656724	0005390021	S	468	GCACACAGCTGGCACCTTCTCCTTATCCTACTGTGGGTCCAACATGGTCC	1	-	247978514-247978563	1q44e	Homo sapiens olfactory receptor, family 14, subfamily A, member 16 (OR14A16), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NR_031736.1	ILMN_388655	MIR1915	NR_031736.1	NR_031736.1		100302129	269847656	NR_031736.1	MIR1915		ILMN_3311075	0004780204	S	21	GCTGCCCGGGCCGTGCACCCGTGGGCCCCAGGGCGACGCGGCGGGGGCGG					Homo sapiens microRNA 1915 (MIR1915), microRNA.					
Homo sapiens	RefSeq	NM_005841.1	ILMN_6281	SPRY1	NM_005841.1	NM_005841.1		10252	40538725	NM_005841.1	SPRY1	NP_005832.1	ILMN_1769280	0001400722	I	18	CACCGTGGTAACTTGCAATGTGGCCGCCCCTGCGCTGGCTTCTTTCTCCT	4	+	124320700-124320749	4q28.1a	Homo sapiens sprouty homolog 1, antagonist of FGF signaling (Drosophila) (SPRY1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12593796] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence NAS]	The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	hSPRY1	hSPRY1
Homo sapiens	RefSeq	NM_005841.1	ILMN_6281	SPRY1	NM_005841.1	NM_005841.1		10252	40538725	NM_005841.1	SPRY1	NP_005832.1	ILMN_2329914	0006760669	A	2114	ACTATGCTGCCTAAAGTGATCTTGGCTCCTTAATGGTCCTTTTGGCCCCT	4	+	124324538-124324587	4q28.1a	Homo sapiens sprouty homolog 1, antagonist of FGF signaling (Drosophila) (SPRY1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12593796] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence NAS]	The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	hSPRY1	hSPRY1
Homo sapiens	RefSeq	XM_931008.1	ILMN_38415	LOC642995	XM_931008.1	XM_931008.1		642995	89060487	XM_931008.1	LOC642995	XP_936101.1	ILMN_1739042	0001740537	I	5190	TCATTCCAGAGATAGCCAGCCCAGGTACAGCAGTGAACAACTTAGTACCC	X	-	191985-192034		PREDICTED: Homo sapiens similar to transcriptional regulator ATRX isoform 1, transcript variant 2 (LOC642995), mRNA.					
Homo sapiens	RefSeq	NM_054111.4	ILMN_370861	IP6K3	NM_054111.4	NM_054111.4		117283	218777828	NM_054111.4	IP6K3	NP_473452.2	ILMN_3261111	0003290102	M	2469	TTTTGGGGGTGGGTTGGGGAGTCAGAAGAACCTGGAGGACGGAGGAAACC	6	-	33689618-33689667	6p21.31f	Homo sapiens inositol hexakisphosphate kinase 3 (IP6K3), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_005706.2	ILMN_17177	TSSC4	NM_005706.2	NM_005706.2		10078	21071005	NM_005706.2	TSSC4	NP_005697.2	ILMN_1802753	0000160309	S	1360	TGTGGGGTGTGGGCTGGAAGCACTGGCTCCCTGGTAGGGACAATAAAGGT	11	+	2381618-2381667	11p15.5a	Homo sapiens tumor suppressing subtransferable candidate 4 (TSSC4), mRNA.					
Homo sapiens	RefSeq	XM_933601.1	ILMN_40108	LOC646422	XM_933601.1	XM_933601.1		646422	88943940	XM_933601.1	LOC646422	XP_938694.1	ILMN_1657816	0002510475	S	252	TCAGCAAGACAGCAGAAGCAGGAAGAGAGCCGGCCGGAAGACACTTACCC	1	+	245516168-245516217		PREDICTED: Homo sapiens hypothetical protein LOC646422 (LOC646422), mRNA.					
Homo sapiens	Unigene	Hs.580515	ILMN_132696	HS.580515	Hs.580515		Hs.580515		792007	R35106			ILMN_1896448	0000990181	S	46	GCCATTGAGAGGTTCTAACCAGTTGCAAGGTGGGTGAGGAGGAAGCACAG	2	+	75537737-75537756:75555092-75555121		yg59f10.r1 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGE:36955 5, mRNA sequence					
Homo sapiens	RefSeq	NM_032995.1	ILMN_26388	ARHGEF4	NM_015320.2	NM_015320.2		50649	15011978	NM_015320.2	ARHGEF4	NP_056135.2	ILMN_1666076	0003850333	A	3403	ACGCTCGTGAGCGTGAGAAGCCATAAGAGAGAGACCGAATTCTGTGGCTC	2	+	131521043-131521092	2q21.1c	Homo sapiens Rho guanine nucleotide exchange factor (GEF) 4 (ARHGEF4), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence NAS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 10947987] [evidence IPI]	STM6; ASEF1; GEF4; ASEF	STM6; ASEF1; GEF4; ASEF
Homo sapiens	RefSeq	XM_939710.3	ILMN_42580	LOC650621	XM_939710.3	XM_939710.3		650621	169218007	XM_939710.3	LOC650621	XP_944803.3	ILMN_3241739	0000730450	S	1240	TATGGGTCTGTGGTGGGAGTAGGAGGGGAGCAGATGTGGGGAGTGGAGGA					PREDICTED: Homo sapiens similar to anaphase-promoting complex subunit 2 (LOC650621), mRNA.					
Homo sapiens	RefSeq	NM_001015883.1	ILMN_15954	MGAT2	NM_001015883.1	NM_001015883.1		4247	62750356	NM_001015883.1	MGAT2	NP_001015883.1	ILMN_2346831	0002060079	A	926	GGGTGCATCAATGCTGAGTATCCCGACTCCTTCGGCCATTATAGAGAGGC	14	+	49158361-49158410	14q22.1a	Homo sapiens mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT2), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7797505] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6-(N-acetyl-beta-D-glucosaminyl-1,2-alpha-D-mannosyl-1,3)-beta-D-mannosyl-R [goid 8455] [pmid 7635144] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	GNT-II; CDGS2; GLCNACTII; GNT2	GNT-II; CDGS2; GLCNACTII; GNT2
Homo sapiens	RefSeq	NM_020300.3	ILMN_988	MGST1	NM_020300.3	NM_020300.3		4257	22035632	NM_020300.3	MGST1	NP_064696.1	ILMN_1781952	0003180731	I	1	AGTCCCTGCATTGCGCGCGACCCGGCGGCGGGACAGGCTTGCTGCTTCCT	12	+	16391846-16391895	12p12.3d	Homo sapiens microsomal glutathione S-transferase 1 (MGST1), transcript variant 1b, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 3372534] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GST12; MGST-I; MGC14525; MGST	GST12; MGST-I; MGC14525; MGST
Homo sapiens	RefSeq	NM_003492.2	ILMN_24628	TMEM187	NM_003492.2	NM_003492.2		8269	133778990	NM_003492.2	TMEM187	NP_003483.1	ILMN_3242211	0006660307	S	1314	GCGTTGAACCCAGGGAAGAACCTGCTGAAAACCGATGACCCCCAGCATTG	X	+	152901487-152901493:152901494-152901536	Xq28f	Homo sapiens transmembrane protein 187 (TMEM187), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CXorf12; ITBA1; DXS9878E	ITBA1; DXS9878E
Homo sapiens	RefSeq	NM_004575.1	ILMN_164542	POU4F2	NM_004575.2	NM_004575.2		5458	110347454	NM_004575.2	POU4F2	NP_004566.2	ILMN_1740035	0004760682	S	2930	GCTGTTCTCTTTGAGGCTCTCCAAAGTCTTGAGTTCTGTATATGGCCTGG	4	+	147563412-147563461	4q31.23a	Homo sapiens POU class 4 homeobox 2 (POU4F2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8995448] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8995448] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IEA]; Long distance growth of a single axon process involved in cellular development [goid 48676] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8995448] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7623109] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Brn-3b; BRN3.2; BRN3B	Brn-3b; BRN3.2; BRN3B
Homo sapiens	Unigene	Hs.554587	ILMN_112042	HS.554587	Hs.554587		Hs.554587		19763163	BQ027884			ILMN_1912201	0004830093	S	183	TGAAGCCTTCCAAGCTTGCTACACCTGGGGCACCATCCAGTTTGCCTGCC	14	-	90954431-90954436:90957046-90957089		UI-H-CO0-are-h-11-0-UI.s1 NCI_CGAP_Sub9 Homo sapiens cDNA clone IMAGE:3106411 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001005746.1	ILMN_29005	CACNB4	NM_001005746.1	NM_001005746.1		785	54607065	NM_001005746.1	CACNB4	NP_001005746.1	ILMN_2257652	0004540059	I	13	CGGATGCCGGGGACTCGGACCCCGCACCCTGAGAGTCTTTGTTAATGGAT	2	-	152663403-152663409:152663410-152663452	2q23.3c	Homo sapiens calcium channel, voltage-dependent, beta 4 subunit (CACNB4), transcript variant 3, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8825650] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16525042] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 16525042] [evidence IDA]; The side of the plasma membrane that faces the cytoplasm [goid 9898] [pmid 16385006] [evidence TAS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [pmid 16525042] [evidence IDA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51925] [pmid 11880487] [evidence IDA]	Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 16525042] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16525042] [evidence IPI]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [pmid 11880487] [evidence IDA]	EA5; CACNLB4; CAB4; EJM	EA5; CACNLB4; CAB4; EJM
Homo sapiens	RefSeq	NM_000441.1	ILMN_23896	SLC26A4	NM_000441.1	NM_000441.1		5172	4505696	NM_000441.1	SLC26A4	NP_000432.1	ILMN_1652465	0005900358	S	4638	TCTGGGTTCATTTGTGATGACATAAGTCAGCAAACTGCGGGAATACTGTC	7	+	107145198-107145247	7q22.3c	Homo sapiens solute carrier family 26, member 4 (SLC26A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10192399] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9398842] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10192399] [evidence TAS]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [pmid 9398842] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of chloride ions from one side of a membrane to the other [goid 15108] [pmid 10192399] [evidence TAS]; Catalysis of the transfer of iodide ions from one side of a membrane to the other [goid 15111] [pmid 10192399] [evidence TAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	PDS; DFNB4	PDS; DFNB4
Homo sapiens	RefSeq	NM_015254.2	ILMN_166409	KIF13B	NM_015254.2	NM_015254.2		23303	46852171	NM_015254.2	KIF13B	NP_056069.2	ILMN_1686562	0005290209	S	8421	GTCACCCTGTGCTTCCTGCCCAAGATACTGACCCATTGAACCCCCAAAGC	8	-	28981040-28981089	8p21.1b	Homo sapiens kinesin family member 13B (KIF13B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10859302] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 10859302] [evidence TAS]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [pmid 10859302] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10859302] [evidence NAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 12496241] [evidence NAS]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 10859302] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10859302] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 10859302] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	KIAA0639; GAKIN	KIAA0639; GAKIN
Homo sapiens	RefSeq	XM_001714737.1	ILMN_347216	LOC649660	XM_001714737.1	XM_001714737.1		649660	169216483	XM_001714737.1	LOC649660	XP_001714789.1	ILMN_3245355	0001850326	S	863	GTCTCCTGCTGAAGCTTAAAGGGTGGATTTCTGAGCTCTATCCAGGGTCA					PREDICTED: Homo sapiens similar to transient receptor potential channel subfamily C member 6 (LOC649660), mRNA.					
Homo sapiens	RefSeq	XM_001717544.1	ILMN_351774	LOC285346	XM_001717544.1	XM_001717544.1		285346	169165088	XM_001717544.1	LOC285346	XP_001717596.1	ILMN_3295146	0006520050	M	1689	ACCAGCGAACTCATGCTGGAGAGAAGCCCTCAGGTCTGGCTCGGTCATCT	3	-	44515683-44515732	3p21.32b	PREDICTED: Homo sapiens hypothetical protein LOC285346 (LOC285346), mRNA.					
Homo sapiens	Unigene	Hs.567094	ILMN_119297	HS.567094	Hs.567094		Hs.567094		19756467	BQ021189			ILMN_1835035	0006650367	S	579	tTGCAGGGGGTGAGGGGACACGTAGGCACCCAGACATGAAAAGGGGACTG					UI-H-DH1-axf-o-15-0-UI.s1 NCI_CGAP_DH1 Homo sapiens cDNA clone IMAGE:5828198 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014757.3	ILMN_6969	MAML1	NM_014757.3	NM_014757.3		9794	41350321	NM_014757.3	MAML1	NP_055572.1	ILMN_1803060	0006770053	I	5098	TTGTGGATCCTTGTTCCTCTCCTGACCCCATCTGGCTGCTGCCCCGTCTC	5	+	179136268-179136317	5q35.3e	Homo sapiens mastermind-like 1 (Drosophila) (MAML1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11101851] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [pmid 11101851] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 11101851] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 11101851] [evidence IDA]	KIAA0200; Mam1; Mam-1	KIAA0200; Mam1; Mam-1
Homo sapiens	RefSeq	XM_937023.1	ILMN_6969	MAML1	NM_014757.3	NM_014757.3		9794	41350321	NM_014757.3	MAML1	NP_055572.1	ILMN_1767813	0005900630	A	2887	AAATGTCTAGCCCGCAATTCTCCCAGGCAGTGCCCAACAGGCCCATGGCT	5	+	179134057-179134106	5q35.3e	Homo sapiens mastermind-like 1 (Drosophila) (MAML1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11101851] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [pmid 11101851] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 11101851] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 11101851] [evidence IDA]	KIAA0200; Mam1; Mam-1	
Homo sapiens	RefSeq	NM_004975.2	ILMN_14811	KCNB1	NM_004975.2	NM_004975.2		3745	27436972	NM_004975.2	KCNB1	NP_004966.1	ILMN_1711092	0006900196	S	3421	CTGGCAATCTGGGAAGGGTTCAGAAGGTGGGCACCCAGCCAACAGCATGA	20	-	47988790-47988839	20q13.13c-q13.13d	Homo sapiens potassium voltage-gated channel, Shab-related subfamily, member 1 (KCNB1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10484328] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11852086] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KV2.1; h-DRK1; DRK1	KV2.1; h-DRK1; DRK1
Homo sapiens	RefSeq	NM_001024463.2	ILMN_24460	HISPPD2A	NM_001024463.2	NM_001024463.2		9677	67083674	NM_001024463.2	HISPPD2A	NP_001019634.1	ILMN_2333766	0001690333	A	4544	AGTGGGCCTCCTCTGTGGTGGGGCTGTTTGGCTTAGGAGATGCTGTAGTA	15	-	41613278-41613327	15q15.3a	Homo sapiens histidine acid phosphatase domain containing 2A (HISPPD2A), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17702752] [evidence IDA]	The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [pmid 17412958] [evidence IDA]	Catalysis of the reaction: ATP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate = ADP + diphospho-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 827] [pmid 17412958] [evidence IDA]; Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate [goid 832] [pmid 17412958] [evidence IDA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol pentakisphosphate = ADP + bis(diphospho)-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 33857] [pmid 17412958] [evidence IDA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	DKFZp313L0221; MGC51871; KIAA0377; VIP1; IPS1; IP6K; PPIP5K1	DKFZp313L0221; MGC51871; KIAA0377; VIP1; IPS1; IP6K; PPIP5K1
Homo sapiens	RefSeq	NM_001024463.2	ILMN_24460	HISPPD2A	NM_001024463.2	NM_001024463.2		9677	67083674	NM_001024463.2	HISPPD2A	NP_001019634.1	ILMN_1703507	0005900278	I	2999	TGTTTGTCCCGGCCGTAAAACGATTTTCTGTGTCGTTTGCAAAGCATCCG	15	-	41643599-41643648	15q15.3a	Homo sapiens histidine acid phosphatase domain containing 2A (HISPPD2A), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17702752] [evidence IDA]	The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [pmid 17412958] [evidence IDA]	Catalysis of the reaction: ATP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate = ADP + diphospho-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 827] [pmid 17412958] [evidence IDA]; Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate [goid 832] [pmid 17412958] [evidence IDA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol pentakisphosphate = ADP + bis(diphospho)-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 33857] [pmid 17412958] [evidence IDA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	DKFZp313L0221; MGC51871; KIAA0377; VIP1; IPS1; IP6K; PPIP5K1	DKFZp313L0221; MGC51871; KIAA0377; VIP1; IPS1; IP6K; PPIP5K1
Homo sapiens	RefSeq	NM_152349.1	ILMN_28583	KRT222	NM_152349.2	NM_152349.2		125113	126723014	NM_152349.2	KRT222	NP_689562.1	ILMN_1801090	0007160056	S	989	AGGATGGACCAAGGTGGGCCATACCAACTCCCTCTGTCCCAAAATGTAAG	17	-	38812568-38812617	17q21.2a	Homo sapiens keratin 222 (KRT222), mRNA.				KA21; MGC45562	MGC45562
Homo sapiens	RefSeq	NM_001077447.1	ILMN_165009	PPCS	NM_001077447.1	NM_001077447.1		79717	116875845	NM_001077447.1	PPCS	NP_001070915.1	ILMN_2396996	0002570725	A	655	AGAAAGGGAAAAGGCAGTGGTGTGTAGGCAAATATGGTTTGGCATTTGTC	1	+	42698284-42698333	1p34.2b	Homo sapiens phosphopantothenoylcysteine synthetase (PPCS), transcript variant 2, mRNA.			Catalysis of the reaction: CTP + (R)-4'-phosphopantothenate + L-cysteine = CMP + diphosphate + (R)-4'-phosphopantothenoyl-L-cysteine. Cysteine can be replaced by some of its derivatives [goid 4632] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC138220; FLJ11838; RP11-163G10.1; MGC117357	MGC138220; FLJ11838; RP11-163G10.1; MGC117357
Homo sapiens	RefSeq	XM_001721334.1	ILMN_341463	LOC100129785	XM_001721334.1	XM_001721334.1		100129785	169178370	XM_001721334.1	LOC100129785	XP_001721386.1	ILMN_3260546	0002650291	M	770	GCTGACTTATCGGAGGCCACACAGCCAGTGAGCAGCAGAGTTGGAATTTG				9q34.11e	PREDICTED: Homo sapiens hypothetical protein LOC100129785 (LOC100129785), mRNA.					
Homo sapiens	RefSeq	NM_017632.1	ILMN_1978	CDKN2AIP	NM_017632.2	NM_017632.2		55602	141803403	NM_017632.2	CDKN2AIP	NP_060102.1	ILMN_1773066	0005090440	S	1670	GTGAATTGAGGTGCAAGTCTGTGTATTTGGGCACTGGCTGTGGAAAAAGC	4	+	184368345-184368394	4q35.1c	Homo sapiens CDKN2A interacting protein (CDKN2AIP), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	FLJ20036; CARF	FLJ20036; CARF
Homo sapiens	RefSeq	NM_058004.1	ILMN_20581	PIK4CA	NM_002650.1	NM_002650.1		5297	4505806	NM_002650.1	PIK4CA	NP_002641.1	ILMN_1655177	0004920273	A	2852	ACGCCATGGACTGCAGCGACAATCAATGGATGGTGCTGTCTATGCACAGG	22	-	19392115-19392164	22q11.21e	Homo sapiens phosphatidylinositol 4-kinase, catalytic, alpha polypeptide (PIK4CA), transcript variant 1, mRNA.				pi4K230; FLJ16556; PI4K-ALPHA	FLJ16556; pi4K230; PI4K-ALPHA
Homo sapiens	RefSeq	NM_002650.1	ILMN_20581	PIK4CA	NM_002650.1	NM_002650.1		5297	4505806	NM_002650.1	PIK4CA	NP_002641.1	ILMN_1734434	0005860500	I	62	GTAGCCCCTTTTTGTGTTTCACAGAGGAGCTAACATTCCTTCTGTACCTG	22	-	19418844-19418893	22q11.21e	Homo sapiens phosphatidylinositol 4-kinase, catalytic, alpha polypeptide (PIK4CA), transcript variant 1, mRNA.				pi4K230; FLJ16556; PI4K-ALPHA	FLJ16556; pi4K230; PI4K-ALPHA
Homo sapiens	RefSeq	NM_017621.2	ILMN_163448	ALKBH4	NM_017621.2	NM_017621.2		54784	20070290	NM_017621.2	ALKBH4	NP_060091.1	ILMN_1805673	0001780379	S	1696	GAGGGCAGGGAAATCTGAGAGCCTCCTTCCAGCCCCATAACGCTGTTAAC	7	-	102097009-102097058	7q22.1e	Homo sapiens alkB, alkylation repair homolog 4 (E. coli) (ALKBH4), mRNA.				FLJ20013	FLJ20013
Homo sapiens	RefSeq	NM_001018138.1	ILMN_17713	NME2	NM_001018138.1	NM_001018138.1		4831	66392204	NM_001018138.1	NME2	NP_001018148.1	ILMN_2234873	0003940736	I	45	GGCCTCCGCGGGCCCCGCCAGAGCCTGCGCCCGGGCCCTGACCGCACCTC	17	+	46599126-46599175	17q21.33b	Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in (NME2), transcript variant 3, mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 11919189] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 11919189] [evidence IDA]	The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8392752] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 11919189] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 93324921] [evidence TAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a nucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with triphosphate on its glycose moiety [goid 9142] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 16862176] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation [goid 45618] [pmid 16862176] [evidence IMP]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [pmid 16862176] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 16862176] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8392752] [evidence TAS]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [pmid 91224972] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC111212; NM23-H2; NM23B; puf; NDPKB; NDPK-B	MGC111212; NM23-H2; NM23B; puf; NDPKB; NDPK-B
Homo sapiens	RefSeq	XM_933808.1	ILMN_32838	LOC400807	XM_933808.1	XM_933808.1		400807	88986393	XM_933808.1	LOC400807	XP_938901.1	ILMN_1754156	0003360050	A	190	GCAGGGCTGGGGTGTCCCCTTCCAACCAGGCTGTCAAGGCCCCAACTCTG	5	+	180688688-180688737		PREDICTED: Homo sapiens hypothetical LOC400807, transcript variant 3 (LOC400807), mRNA.					
Homo sapiens	RefSeq	NM_002064.1	ILMN_22606	GLRX	NM_002064.1	NM_002064.1		2745	4504024	NM_002064.1	GLRX	NP_002055.1	ILMN_1737308	0004590228	S	982	AGTTGGTCTTGGTGTCATATGGATCAGAGGCACAAGTGCAGAGGCTGTGG	5	-	95175728-95175777	5q15d	Homo sapiens glutaredoxin (thioltransferase) (GLRX), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16884690] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [evidence IEA]; Catalysis of the reaction: 2 glutathione + electron acceptor = glutathione disulfide + electron donor [goid 15038] [pmid 7851394] [evidence TAS]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 16884690] [evidence IPI]	GRX; GRX1; MGC117407	GRX; GRX1; MGC117407
Homo sapiens	RefSeq	NM_005374.3	ILMN_8793	MPP2	NM_005374.3	NM_005374.3		4355	52630446	NM_005374.3	MPP2	NP_005365.3	ILMN_1654217	0002510541	S	4269	GAGTGAGGACCCTACCATCCACTGTCCATATTCAGTCCCAGCCCCAGTGC	17	-	41952820-41952869	17q21.31b	Homo sapiens membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) (MPP2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7590743] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7590743] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8824795] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7590743] [evidence TAS]	Catalysis of the reaction: ATP + GMP = ADP + GDP [goid 4385] [pmid 7590743] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	DKFZp686J2189; DLG2; DKFZp686A06252; DKFZp761D0712	DKFZp686J2189; DLG2; DKFZp686A06252; DKFZp761D0712
Homo sapiens	RefSeq	NM_031894.1	ILMN_27696	FTHL17	NM_031894.1	NM_031894.1		53940	13994243	NM_031894.1	FTHL17	NP_114100.1	ILMN_1735439	0000060754	S	604	TGAGTACCTGTTCGACAAGCTCACCCTGGGCGGCCGCGTCAAAGAGACTT	X	-	31089517-31089518:31089519-31089566	Xp21.2a	Homo sapiens ferritin, heavy polypeptide-like 17 (FTHL17), mRNA.		The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	RefSeq	NM_001024668.1	ILMN_642	LETMD1	NM_015416.3	NM_015416.3		25875	67089164	NM_015416.3	LETMD1	NP_056231.3	ILMN_1782743	0001850379	A	1471	GCCCCAGGTGGGAATCCTTATTTGGCTTAGGACTGATCCACTTCCATGTT	12	+	49739813-49739862	12q13.13b	Homo sapiens LETM1 domain containing 1 (LETMD1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp586A011; HCCR-2; 1110019O13Rik; HCCR1	DKFZp586A011; HCCR-2; 1110019O13Rik; HCCR1
Homo sapiens	RefSeq	NM_015416.3	ILMN_642	LETMD1	NM_015416.3	NM_015416.3		25875	67089164	NM_015416.3	LETMD1	NP_056231.3	ILMN_2264681	0002570435	I	106	CAGTCACCCCTGGACATTTTGTCACCCGGAGGCTGCAACTTGGTCGCTCT	12	+	49728456-49728505	12q13.13b	Homo sapiens LETM1 domain containing 1 (LETMD1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp586A011; HCCR-2; 1110019O13Rik; HCCR1	DKFZp586A011; HCCR-2; 1110019O13Rik; HCCR1
Homo sapiens	RefSeq	NM_001966.2	ILMN_2150	EHHADH	NM_001966.2	NM_001966.2		1962	68989262	NM_001966.2	EHHADH	NP_001957.2	ILMN_1701507	0004880382	S	2681	CCAGCACAGGGAACTTAGGTTAGTGTGGCAAGCCTTTCCTCTTCTGGTCT	3	-	186392176-186392225	3q27.2a	Homo sapiens enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase (EHHADH), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 8188243] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+ [goid 3857] [pmid 8188243] [evidence TAS]; Catalysis of the reaction: 3-cis-dodecenoyl-CoA = 2-trans-dodecenoyl-CoA [goid 4165] [evidence IEA]; Catalysis of the reaction: (3S)-3-hydroxyacyl-CoA = trans-2(or 3)-enoyl-CoA + H2O [goid 4300] [pmid 8188243] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	ECHD; LBFP; LBP; PBFE; MGC120586	ECHD; LBFP; PBFE; MGC120586; LBP
Homo sapiens	RefSeq	NM_016016.1	ILMN_8191	SLC25A39	NM_016016.1	NM_016016.1		51629	7706305	NM_016016.1	SLC25A39	NP_057100.1	ILMN_1743911	0000650634	S	1420	AGCTGCCCCCTTCGTGTTTCCCTGTGTTTGCTGTAGCTGGGCATGTCTCC	17	-	39752602-39752651	17q21.31c	Homo sapiens solute carrier family 25, member 39 (SLC25A39), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	CGI-69; CGI69; FLJ22407	CGI-69; FLJ22407; CGI69
Homo sapiens	RefSeq	NM_002240.2	ILMN_23650	KCNJ6	NM_002240.2	NM_002240.2		3763	25121967	NM_002240.2	KCNJ6	NP_002231.1	ILMN_1805376	0003130711	S	2278	CCCATGTGGGTGTGGCAGTTACAGGGCCCAGGTGAGCTGAAGACAAACCA	21	-	38996942-38996991	21q22.13b	Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 6 (KCNJ6), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 16780588] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16780588] [evidence IDA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 7796919] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 7796919] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 15467] [pmid 7550338] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KCNJ7; MGC126596; BIR1; KATP2; hiGIRK2; KIR3.2; GIRK2	KCNJ7; MGC126596; BIR1; KATP2; hiGIRK2; KIR3.2; GIRK2
Homo sapiens	RefSeq	NM_173635.1	ILMN_29282	C19ORF75	NM_173635.1	NM_173635.1		284369	27735026	NM_173635.1	C19orf75	NP_775906.1	ILMN_1699309	0004010341	S	1503	CTGTTCAGAGATGCAGGTGAGAAAAAACATGACGATGGGCCCTGAATGCC	19	+	51772379-51772428	19q13.33d	Homo sapiens chromosome 19 open reading frame 75 (C19orf75), mRNA.				MGC161635; MGC161637	MGC161635; MGC161637
Homo sapiens	RefSeq	NM_000262.1	ILMN_21273	NAGA	NM_000262.1	NM_000262.1		4668	4557780	NM_000262.1	NAGA	NP_000253.1	ILMN_1784651	0002070523	S	3069	TCTTGAGGCTGTTGAGAAACTTAGGACAGAAGCCTACCTCATCCCAGGCC	22	-	40784818-40784867	22q13.2b	Homo sapiens N-acetylgalactosaminidase, alpha- (NAGA), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D-galactosaminides [goid 8456] [pmid 2174888] [evidence TAS]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	D22S674; GALB	D22S674; GALB
Homo sapiens	RefSeq	NM_001099409.1	ILMN_309170	EHBP1L1	NM_001099409.1	NM_001099409.1		254102	150378548	NM_001099409.1	EHBP1L1	NP_001092879.1	ILMN_3244457	0006400224	S	5011	GCCGCCGTATTTATTTGTCACCGAGGGTGTGTGCGCGCTCGCGGCGGGTG	11	+	65116523-65116572	11q13.1d	Homo sapiens EH domain binding protein 1-like 1 (EHBP1L1), mRNA.				FLJ35431; TANGERIN; DKFZp762C186	FLJ35431; TANGERIN; DKFZp762C186
Homo sapiens	RefSeq	XM_001718939.1	ILMN_347827	LOC100133425	XM_001718939.1	XM_001718939.1		100133425	169218265	XM_001718939.1	LOC100133425	XP_001718991.1	ILMN_3245894	0000050066	S	974	GAAGCCGGAATTATTGCCGTTCCCTGGACAAGCTCATCCGCATAGAGTAA					PREDICTED: Homo sapiens hypothetical protein LOC100133425 (LOC100133425), mRNA.					
Homo sapiens	RefSeq	NM_030937.2	ILMN_139321	CCNL2	NM_030937.2	NM_030937.2		81669	24475708	NM_030937.2	CCNL2	NP_112199.1	ILMN_1698260	0005490347	S	1448	TGCTGGATGGTACCTCGGGGTTCTCCCATGTCAGTGGTCTCAATGTATTG	1	+	173230-173256:174766-174788	1p36.33a	Homo sapiens cyclin L2 (CCNL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		HCLA-ISO; DKFZp761A1210; ania-6b; PCEE; SB138; DKFZp762O195; HLA-ISO	HCLA-ISO; ania-6b; DKFZp761A1210; PCEE; SB138; DKFZp762O195; HLA-ISO
Homo sapiens	RefSeq	NM_001024630.1	ILMN_11767	RUNX2	NM_001024630.2	NM_001024630.2		860	116734654	NM_001024630.2	RUNX2	NP_001019801.2	ILMN_1716651	0000940504	A	4925	CCCTCAATTCCGAGGAAAGGGACTGGCCCAGAATCCAGGTTAATACATGG	6	+	45626169-45626218	6p12.3f	Homo sapiens runt-related transcription factor 2 (RUNX2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IEA]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [evidence IEA]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [pmid 12217689] [evidence TAS]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11965546] [evidence IDA]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [evidence IEA]; Any process that modulates the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42487] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling [goid 45879] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9182765] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9182762] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11965546] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12145306] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11965546] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 11965546] [evidence IDA]	PEBP2A2; MGC120023; PEA2aA; CBFA1; MGC120022; AML3; OSF2; PEBP2aA1; PEBP2A1; PEBP2aA; CCD1; CCD	MGC120023; PEBP2A2; PEA2aA; CBFA1; MGC120022; AML3; OSF2; PEBP2aA1; PEBP2A1; PEBP2aA; CCD1; CCD
Homo sapiens	RefSeq	XM_001719914.1	ILMN_347099	LOC100130298	XM_001719914.1	XM_001719914.1		100130298	169172516	XM_001719914.1	LOC100130298	XP_001719966.1	ILMN_3190482	0004220136	A	208	GGAATGACTTCACCCATCCTGCTTCCACCCGCCATAGCAGTGACCAAAGC				8q12.2a	PREDICTED: Homo sapiens similar to hCG1816373 (LOC100130298), mRNA.					
Homo sapiens	RefSeq	NM_003270.2	ILMN_19245	TSPAN6	NM_003270.2	NM_003270.2		7105	21265115	NM_003270.2	TSPAN6	NP_003261.1	ILMN_1730998	0002470255	S	1478	GGTTGCCAGATGGTGATAACAGTGTAAGGCCTTGGGTCTAAGGCATCCAC	X	-	99884336-99884385	Xq22.1b	Homo sapiens tetraspanin 6 (TSPAN6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	T245; TSPAN-6; TM4SF6	T245; TSPAN-6; TM4SF6
Homo sapiens	RefSeq	NM_003270.2	ILMN_19245	TSPAN6	NM_003270.2	NM_003270.2		7105	21265115	NM_003270.2	TSPAN6	NP_003261.1	ILMN_2183856	0000240736	S	1872	CTGCTGGAATGGTTGTTGTTTTCCACTGAGAAAGCTAAGCCCTACATTTC	X	-	99883942-99883991	Xq22.1b	Homo sapiens tetraspanin 6 (TSPAN6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	T245; TSPAN-6; TM4SF6	T245; TSPAN-6; TM4SF6
Homo sapiens	RefSeq	NM_018995.1	ILMN_18083	MOV10L1	NM_018995.1	NM_018995.1		54456	14251206	NM_018995.1	MOV10L1	NP_061868.1	ILMN_1756211	0005390376	S	3599	CAGACCCCTCCTACCCAGTGGTGCCAGAATCCACAGGACCAGAGAAGCAT	22	+	48941944-48941993	22q13.33a	Homo sapiens Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) (MOV10L1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11839499] [evidence IC ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [pmid 11279525] [evidence IEP]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 11279525] [evidence IEP]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 11839499] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11839499] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 11279525] [evidence NAS]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11839499] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp434B0717; FLJ33421; DJ402G11.8	FLJ33421; DKFZp434B0717; DJ402G11.8
Homo sapiens	RefSeq	XM_935646.1	ILMN_308766	LOC641901	NM_001085389.1	NM_001085389.1		641901	145966738	NM_001085389.1	LOC641901	NP_001078858.1	ILMN_1689093	0004230082	S	778	AGCCACTATCCCGACGTGTTCATGCGCGAGGTGCGCCCTGTCCCTCAGCA					Homo sapiens similar to Unc4.1 homeobox (LOC641901), mRNA.					
Homo sapiens	RefSeq	NM_002001.2	ILMN_18288	FCER1A	NM_002001.2	NM_002001.2		2205	31317229	NM_002001.2	FCER1A	NP_001992.1	ILMN_1688423	0003360615	S	812	GAACCAGGAAAGGCTTCAGACTTCTGAACCCACATCCTAAGCCAAACCCC	1	+	157544285-157544334	1q23.2a	Homo sapiens Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide (FCER1A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1535625] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2964640] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of type I hypersensitivity, a type of inflammatory response [goid 1812] [evidence IEA]; The regulated release of serotonin by a cell or group of cells. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells [goid 1820] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of mast cell degranulation [goid 43306] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-3 [goid 45401] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of granulocyte macrophage colony-stimulating factor [goid 45425] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an immunoglobulin of the IgE isotype via the Fc region to initiate a change in cell activity [goid 19767] [evidence IEA]	FCE1A; FcERI	FCE1A; FcERI
Homo sapiens	RefSeq	NM_145026.2	ILMN_183806	SPATS1	NM_145026.2	NM_145026.2		221409	38570144	NM_145026.2	SPATS1	NP_659463.1	ILMN_1711681	0000990468	S	1083	GAGCCTCTTCCACAAATTCCCAACTTGCCTTTCTGGGTGAAGGAGAAGGC	6	+	44445806-44445828:44452073-44452099	6p21.1b	Homo sapiens spermatogenesis associated, serine-rich 1 (SPATS1), mRNA.				SPATA8; MGC119211; SRSP1; MGC133020; FLJ25442; MGC119213; MGC119210; MGC119212	SPATA8; MGC119211; SRSP1; MGC133020; FLJ25442; MGC119213; MGC119210; MGC119212
Homo sapiens	RefSeq	XM_926889.1	ILMN_38529	LOC643584	XM_926889.1	XM_926889.1		643584	89058165	XM_926889.1	LOC643584	XP_931982.1	ILMN_1682214	0003140136	S	166	CTGAGAGTTGCCAAAGAACTCATAGTGAACCATTCCATAGTCATTCGGCA	21	-	27451828-27451877		PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC643584), mRNA.					
Homo sapiens	RefSeq	NR_003719.1	ILMN_340058	NBPF22P	NR_003719.1	NR_003719.1		285622	157057143	NR_003719.1	NBPF22P		ILMN_3241634	0004760719	S	2157	GCAGGCAGAGAAGGCCCAGTGTGTCCATCCCCAATGCGGTGATACTAGGA	5	+	85592886-85592935	5q14.3c	Homo sapiens neuroblastoma breakpoint family, member 22 (pseudogene) (NBPF22P), non-coding RNA.				MGC48637	MGC48637
Homo sapiens	RefSeq	NR_030527.1	ILMN_387973	MIR765	NR_030527.1	NR_030527.1		768220	262205713	NR_030527.1	MIR765		ILMN_3308570	0002360674	S	37	CTTTTCAAGCCCTACGAGAAACTGGGGTTTCTGGAGGAGAAGGAAGGTGA				1q23.1b	Homo sapiens microRNA 765 (MIR765), microRNA.					
Homo sapiens	RefSeq	NM_001008783.1	ILMN_16642	SLC35D3	NM_001008783.1	NM_001008783.1		340146	56912197	NM_001008783.1	SLC35D3	NP_001008783.1	ILMN_1702419	0004480390	S	2200	ACTGAAACCCAGCCAGAAGAGGGACCACCTGTAAAGCAAGTCCTTTCAAG	6	+	137246618-137246667	6q23.3c	Homo sapiens solute carrier family 35, member D3 (SLC35D3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	bA55K22.3; FRCL1; MGC102873	bA55K22.3; FRCL1; MGC102873
Homo sapiens	RefSeq	NM_014038.1	ILMN_8642	BZW2	NM_014038.1	NM_014038.1		28969	7661743	NM_014038.1	BZW2	NP_054757.1	ILMN_1676548	0001440612	S	1590	AAATGGAGCCCTGAGGCATCAGCTATTATACTTGGGACTCTACCTCTCAC	7	+	16712406-16712455	7p21.1b	Homo sapiens basic leucine zipper and W2 domains 2 (BZW2), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MST017; MSTP017; HSPC028	MST017; MSTP017; HSPC028
Homo sapiens	RefSeq	XM_940209.1	ILMN_37512	KIAA0194	XM_940209.1	XM_940209.1		22993	88989597	XM_940209.1	KIAA0194	XP_945302.1	ILMN_1694686	0004860291	S	5395	AGGGGAAGCAGACTGGGCCATAAGGAAACAGCAGGACTGGCTCAAGTGCC				5q33.1c	PREDICTED: Homo sapiens KIAA0194 protein (KIAA0194), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	Unigene	Hs.538387	ILMN_103868	HS.538387	Hs.538387		Hs.538387		11510461	BF445323			ILMN_1915910	0002370133	S	208	CCTTCAAAGTGCCACAAAGTCACGGGGGAGAGTATGGACAAAGCAGGCTG	10	-	90959886-90959935		naa03h05.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:3253880 3, mRNA sequence					
Homo sapiens	RefSeq	XM_927384.1	ILMN_42552	LOC642947	NM_001039895.2	NM_001039895.2		642947	134254453	NM_001039895.2	LOC642947	NP_001034984.1	ILMN_1653660	0000510170	S	137	GCATGCTATAACCCTGGGGTGTTAGGACTAGGCACATGACTTTGTTCTCT				9q21.13c	Homo sapiens hypothetical protein LOC642947 (LOC642947), mRNA.					
Homo sapiens	RefSeq	NM_017443.3	ILMN_3721	POLE3	NM_017443.3	NM_017443.3		54107	31543422	NM_017443.3	POLE3	NP_059139.2	ILMN_1785198	0001300491	S	1993	CTGTTGGCCTTTCTTAGCCTTTTTCTGTTTCCATTCAGTGCTCCAAGCGC	9	-	115209484-115209533	9q32c	Homo sapiens polymerase (DNA directed), epsilon 3 (p17 subunit) (POLE3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10801849] [evidence TAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 10801849] [evidence TAS]	Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 10801849] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10801849] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	YBL1; p17; CHRAC17; CHARAC17	YBL1; p17; CHRAC17; CHARAC17
Homo sapiens	RefSeq	NM_178173.2	ILMN_29293	CCDC36	NM_178173.2	NM_178173.2		339834	31342337	NM_178173.2	CCDC36	NP_835467.1	ILMN_1722863	0005860408	S	2284	CCTGCTGAGGTGGGGCAATGAGCACGAGGGCAGGGAAGGTCCAGCATTCT	3	+	49269831-49269880	3p21.31d	Homo sapiens coiled-coil domain containing 36 (CCDC36), mRNA.				FLJ25320	FLJ25320
Homo sapiens	RefSeq	XM_001723682.1	ILMN_345644	LOC100133896	XM_001723682.1	XM_001723682.1		100133896	169201772	XM_001723682.1	LOC100133896	XP_001723734.1	ILMN_3244209	0003520433	S	1746	TCCGGCGGGATCGAAGGAGAGCTTGTCCTCGAGCTGCAGCAGTAGAGACT					PREDICTED: Homo sapiens hypothetical protein LOC100133896 (LOC100133896), mRNA.					
Homo sapiens	RefSeq	NM_031859.1	ILMN_24503	PCDHA10	NM_018901.2	NM_018901.2		56139	14165379	NM_018901.2	PCDHA10	NP_061724.1	ILMN_1669474	0002600253	A	642	TGATGGAGGCAAACCTGAATTTACCGGATCTGTTTCTCTGCTGATCCTGG	5	+	140216459-140216508	5q31.3b	Homo sapiens protocadherin alpha 10 (PCDHA10), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CNRN8; CNR8; CNRS8; PCDH-ALPHA10; CRNR8	CNRN8; CNR8; CNRS8; PCDH-ALPHA10; CRNR8
Homo sapiens	RefSeq	NM_007238.3	ILMN_9930	PXMP4	NM_183397.2	NM_183397.2		11264	115511033	NM_183397.2	PXMP4	NP_899634.1	ILMN_1771728	0003800670	A	1222	AATTAGCCGGGTTCCATCACCTGTGGTTCCAGCTGAGGTGGGAGGATCAC	20	-	32294803-32294852	20q11.22a	Homo sapiens peroxisomal membrane protein 4, 24kDa (PXMP4), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10366717] [evidence TAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [pmid 10366717] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10366717] [evidence TAS]			PMP24	PMP24
Homo sapiens	RefSeq	NM_183397.2	ILMN_9930	PXMP4	NM_183397.2	NM_183397.2		11264	115511033	NM_183397.2	PXMP4	NP_899634.1	ILMN_3250812	0000770431	M	4772	GGCAATATAGCATGGTGGTCAGGGACATAGGCTTTGGAGCCAGAGTGCCT	20	-	32291253-32291302	20q11.22a	Homo sapiens peroxisomal membrane protein 4, 24kDa (PXMP4), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10366717] [evidence TAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [pmid 10366717] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10366717] [evidence TAS]			PMP24	PMP24
Homo sapiens	RefSeq	NM_138274.1	ILMN_20613	C6ORF25	NM_138274.1	NM_138274.1		80739	19913378	NM_138274.1	C6orf25	NP_612118.1	ILMN_2307407	0002810470	A	315	TTTTTTCTGCAAGGGCCGCCACGAGGACGAGAGCCGTACAGTGCTTCACG	6	+	31691669-31691718	6p21.33a	Homo sapiens chromosome 6 open reading frame 25 (C6orf25), transcript variant 4, mRNA.				NG31; MGC142281; G6b; MGC142279	NG31; MGC142281; G6b; MGC142279
Homo sapiens	RefSeq	XR_018156.1	ILMN_162190	LOC647595	XR_018156.1	XR_018156.1		647595	113421087	XR_018156.1	LOC647595		ILMN_3247367	0001990431	S	1992	AAAGATTGGGAAAATGTATCCTCAGCAATTTCCCAAGAAACTGAAGGAAG					PREDICTED: Homo sapiens misc_RNA (LOC647595), miscRNA.					
Homo sapiens	RefSeq	NM_001007234.1	ILMN_5204	ERCC8	NM_001007234.1	NM_001007234.1		1161	55956772	NM_001007234.1	ERCC8	NP_001007235.1	ILMN_1746661	0000160168	I	709	CTTTGTGCTGGTTGTTGAGACTCAGCAGGGAAATAAAGATCCTTCTGTGC	5	-	60235079-60235128	5q12.1b	Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 8 (ERCC8), transcript variant 3, mRNA.	Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [pmid 12732143] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 16916636] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11782547] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11782547] [evidence IDA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 12732143] [evidence IDA]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [pmid 16916636] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 11782547] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 17297471] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 11782547] [evidence IDA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 7664335] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 12732143] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA repair [goid 45739] [pmid 7664335] [evidence IMP]; The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink [goid 51865] [pmid 12732143] [evidence IDA]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 8999876] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 12732143] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7664335] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 8999876] [evidence IDA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 16916636] [evidence IDA]	CSA; CKN1	CSA; CKN1
Homo sapiens	RefSeq	NM_001007234.1	ILMN_5204	ERCC8	NM_001007234.1	NM_001007234.1		1161	55956772	NM_001007234.1	ERCC8	NP_001007235.1	ILMN_1792107	0001570242	A	507	CCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACCCAA	5	-	60235281-60235300:60236376-60236405	5q12.1b	Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 8 (ERCC8), transcript variant 3, mRNA.	Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [pmid 12732143] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 16916636] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11782547] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11782547] [evidence IDA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 12732143] [evidence IDA]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [pmid 16916636] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 11782547] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 17297471] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 11782547] [evidence IDA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 7664335] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 12732143] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA repair [goid 45739] [pmid 7664335] [evidence IMP]; The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink [goid 51865] [pmid 12732143] [evidence IDA]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 8999876] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 12732143] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7664335] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 8999876] [evidence IDA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 16916636] [evidence IDA]	CSA; CKN1	CSA; CKN1
Homo sapiens	RefSeq	NM_003059.2	ILMN_167872	SLC22A4	NM_003059.2	NM_003059.2		6583	24497489	NM_003059.2	SLC22A4	NP_003050.2	ILMN_2050911	0004850168	S	1866	GACCCTGTGGAGAAATTCGTTGTTCCCACTGAAATGGACTGACTGTAACG	5	+	131670507-131670556	5q31.1b	Homo sapiens solute carrier family 22 (organic cation/ergothioneine transporter), member 4 (SLC22A4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16729965] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9426230] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9426230] [evidence TAS]	The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The regulated release of a fluid by a cell or group of cells in a multicellular organism [goid 7589] [pmid 9426230] [evidence TAS]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IEA]; The directed movement into, out of, within or between cells of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15697] [evidence IEA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [pmid 16729965] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 9426230] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 8513] [pmid 9426230] [evidence TAS]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [pmid 16729965] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	OCTN1; MGC40524; MGC34546	OCTN1; MGC40524; MGC34546
Homo sapiens	RefSeq	NR_024442.1	ILMN_371075	LOC728989	NR_024442.1	NR_024442.1		728989	212549558	NR_024442.1	LOC728989		ILMN_3243102	0002630392	S	694	TGGAGCAGTTCATCATCAGCCAGCGTGAAATCCCTAAGGGCTCTGCCATG	1	-	146491227-146491253:146493270-146493292	1q21.1c	Homo sapiens phosphodiesterase 4D interacting protein pseudogene (LOC728989), non-coding RNA.					
Homo sapiens	RefSeq	XR_036854.1	ILMN_353088	LOC100132266	XR_036854.1	XR_036854.1		100132266	169169356	XR_036854.1	LOC100132266		ILMN_3249555	0003930619	S	819	CCCTGCAGCTGTGCCGGGGGAAAGCTGGGCAATTTCCCTCCTCCGAGCCC	6	+	90564-90613	6p25.3b	PREDICTED: Homo sapiens misc_RNA (LOC100132266), miscRNA.					
Homo sapiens	RefSeq	NM_207329.1	ILMN_182649	MYADML	NR_003143.1	NR_003143.1		151325	112734809	NR_003143.1	MYADML		ILMN_1737513	0004120743	S	1645	GCCTTAGTCAGTGTGTACTTGTGTGTGTTTGGGGGAGTGGGAATTGGGCC	2	-	33805084-33805133	2p22.3c	Homo sapiens myeloid-associated differentiation marker-like (MYADML), non-coding RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.201186	ILMN_81642	HS.201186	Hs.201186		Hs.201186		27835559	BX108993			ILMN_1911487	0005080646	S	338	CATGGTTGGCAATGACAGGTATAACTTCTCCCAGGTTCCGGAGGCAGGTG	5	+	119100542-119100591		BX108993 NCI_CGAP_Ut2 Homo sapiens cDNA clone IMAGp998G095669, mRNA sequence					
Homo sapiens	RefSeq	NM_145007.1	ILMN_10643	NLRP11	NM_145007.2	NM_145007.2		204801	142354554	NM_145007.2	NLRP11	NP_659444.1	ILMN_1790843	0003780301	S	2941	GGTAGTTGGGCTTCCATTAACTGGCCTGAACACACAAACCCAGCAGTTGC	19	-	60989008-60989049:60991985-60991992	19q13.42c	Homo sapiens NLR family, pyrin domain containing 11 (NLRP11), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PAN10; FLJ26273; PYPAF6; CLR19.6; PYPAF7; NOD17; NALP11	PAN10; FLJ26273; PYPAF6; CLR19.6; PYPAF7; NOD17; NALP11
Homo sapiens	RefSeq	XR_039373.1	ILMN_346035	LOC729686	XR_039373.1	XR_039373.1		729686	169208882	XR_039373.1	LOC729686		ILMN_3226613	0000770209	A	899	GTCTCTGGATGAATGACCAGGAGGCTATTCAAGATCTCTGGCAGTGGAGG				15q24.1a	PREDICTED: Homo sapiens misc_RNA (LOC729686), miscRNA.					
Homo sapiens	RefSeq	NM_199265.1	ILMN_16898	THSD3	NM_199265.1	NM_199265.1		145501	40805855	NM_199265.1	THSD3	NP_954874.1	ILMN_1734862	0003420504	I	186	AGCTCGGAGAGGAGTCCCGCCGGTGCGAGGAATCTGGCGCTTTGCGGAGT	14	-	77034353-77034402	14q24.3c-q24.3d	Homo sapiens thrombospondin, type I, domain containing 3 (THSD3), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			TAIL1; MGC119416; DKFZp686E0215; FLJ32147	TAIL1; MGC119416; DKFZp686E0215; FLJ32147
Homo sapiens	RefSeq	NM_014300.2	ILMN_12976	SEC11A	NM_014300.2	NM_014300.2		23478	33859831	NM_014300.2	SEC11A	NP_055115.1	ILMN_1693490	0002570088	S	1048	TTTCCATGCCAGAGTTTGTGTGGGCGGGCGCATGTGCACCACAGAGTGCA	15	-	85213060-85213109	15q25.3a	Homo sapiens SEC11 homolog A (S. cerevisiae) (SEC11A), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	SPC18; SPCS4A; 1810012E07Rik; sid2895; SEC11L1	SPCS4A; SEC11L1; SPC18; 1810012E07Rik; sid2895
Homo sapiens	Unigene	Hs.523127	ILMN_100255	HS.523127	Hs.523127		Hs.523127		7039914	AW469808			ILMN_1857861	0003930193	S	38	CCACAAGGGAATTCCAAAGGAAGGCAGTCCAGGGTGAGATGGGGACTCTG	10	-	89807826-89807875		hd35c03.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2911492 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001714512.1	ILMN_339763	LOC729275	XM_001714512.1	XM_001714512.1		729275	169217044	XM_001714512.1	LOC729275	XP_001714564.1	ILMN_3223541	0004920551	A	1471	CAGAAAAGCTGAGAAAGGCGGCCAATAAGGTGGTAATCTGAGGAGCTGGC				Xp11.23d	PREDICTED: Homo sapiens hypothetical protein LOC729275 (LOC729275), mRNA.					
Homo sapiens	RefSeq	XM_001714512.1	ILMN_339763	LOC729275	XM_001714512.1	XM_001714512.1		729275	169217044	XM_001714512.1	LOC729275	XP_001714564.1	ILMN_3300098	0006590554	M	1662	GTGGGATAAGGAAAGTAAGTGTCGGCTGTCGCGTGGTCACTGCCACCACC				Xp11.23d	PREDICTED: Homo sapiens hypothetical protein LOC729275 (LOC729275), mRNA.					
Homo sapiens	RefSeq	NM_182801.1	ILMN_21981	EGFLAM	NM_182801.1	NM_182801.1		133584	33469936	NM_182801.1	EGFLAM	NP_877953.1	ILMN_1759487	0005820402	I	112	TCTCCCTGTTCTCTTTCATGCTGGCACCGGGCAGAGTGTGGGAACTACTG	5	+	38445747-38445796	5p13.2a-p13.1c	Homo sapiens EGF-like, fibronectin type III and laminin G domains (EGFLAM), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AGRINL; AGRNL; FLJ39155	AGRINL; AGRNL; FLJ39155
Homo sapiens	RefSeq	NM_152403.2	ILMN_21981	EGFLAM	NM_182801.1	NM_182801.1		133584	33469936	NM_182801.1	EGFLAM	NP_877953.1	ILMN_1654109	0006270372	A	1202	GGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGGTTC	5	+	38464555-38464604	5p13.2a-p13.1c	Homo sapiens EGF-like, fibronectin type III and laminin G domains (EGFLAM), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			AGRINL; AGRNL; FLJ39155	AGRINL; AGRNL; FLJ39155
Homo sapiens	RefSeq	NM_001127212.1	ILMN_365584	GAGE2A	NM_001127212.1	NM_001127212.1		729447	187761325	NM_001127212.1	GAGE2A	NP_001120684.1	ILMN_3244168	0005490647	S	150	AGCCTCCTGAAATGATTGGGCCTATGCGGCCCGAGCAGTTCAGTGATGAA	X	+	49355306-49355334:49355800-49355820	Xp11.23b	Homo sapiens G antigen 2A (GAGE2A), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	Unigene	Hs.561205	ILMN_114723	HS.561205	Hs.561205		Hs.561205		19760046	BQ024767			ILMN_1877353	0004180154	S	498	CTGGTTCATGCTTCTCATGCAACAGACAAGAGAGCCAAGGCTAGCTAGGC	3	-	113631619-113631668		UI-1-BB1p-ats-a-06-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-ats-a-06-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_182749.1	ILMN_171861	LOC642897	XR_017554.1	XR_017554.1		642897	113422569	XR_017554.1	LOC642897		ILMN_1701077	0005560253	A	557	GAAGACAAAAGGTCTGCAAGGAACCACTGCACTTTCCAGACAAGCAGGCC	11	-	92982603-92982652	11q21a	PREDICTED: Homo sapiens misc_RNA (LOC642897), miscRNA.					PRED28; N6AMT1; MGC19995
Homo sapiens	RefSeq	XR_037820.1	ILMN_340978	LOC100129381	XR_037820.1	XR_037820.1		100129381	169161472	XR_037820.1	LOC100129381		ILMN_3183573	0003180598	A	120	CCTCAAGGCCCAGCTCAGGGAACTGATTATTACAGCAGCGAGGGAAACTG	1	+	1657145-1657194	1p36.33a	PREDICTED: Homo sapiens misc_RNA (LOC100129381), miscRNA.					
Homo sapiens	RefSeq	NM_015678.3	ILMN_171545	NBEA	NM_015678.3	NM_015678.3		26960	62422576	NM_015678.3	NBEA	NP_056493.3	ILMN_2048647	0000430070	S	10569	CATCACCAGGCTGTAAGCAATATCTTGAGTTTGTAGCTTAGAATTGGGAG	13	+	35144650-35144699	13q13.2b-q13.3a	Homo sapiens neurobeachin (NBEA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence ISS]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BCL8B; LYST2	BCL8B; LYST2
Homo sapiens	RefSeq	NM_015678.3	ILMN_171545	NBEA	NM_015678.3	NM_015678.3		26960	62422576	NM_015678.3	NBEA	NP_056493.3	ILMN_1705346	0006450592	S	10280	CGTCATAGATGTACATATTGTGTCGGTAGGGCTATGAGGCATGTTACAGG	13	+	35144361-35144410	13q13.2b-q13.3a	Homo sapiens neurobeachin (NBEA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence ISS]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BCL8B; LYST2	BCL8B; LYST2
Homo sapiens	RefSeq	NM_173648.2	ILMN_22711	CCDC141	NM_173648.2	NM_173648.2		285025	39725716	NM_173648.2	CCDC141	NP_775919.2	ILMN_1693711	0003360082	S	3174	GAGAGGTGGAATATAAATATTTCTGTCACAGTTCCTCCAGGTGACAGGCA	2	-	179701054-179701103	2q31.2b	Homo sapiens coiled-coil domain containing 141 (CCDC141), mRNA.				MGC134803; FLJ39502; FLJ26337	MGC134803; FLJ39502; FLJ26337
Homo sapiens	RefSeq	NM_173576.1	ILMN_28370	MKX	NM_173576.1	NM_173576.1		283078	27734826	NM_173576.1	MKX	NP_775847.1	ILMN_1681780	0006620017	S	3413	ATCCCCCCAGTCCTTTAAAAGAATCTTGAACAATGCTGAGCCGGCAGCTG	10	-	28001951-28002000	10p12.1a	Homo sapiens mohawk homeobox (MKX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 16408284] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC39616; IFRX; IRXL1; C10orf48	MGC39616; IFRX; IRXL1; C10orf48
Homo sapiens	RefSeq	NM_152515.2	ILMN_28483	CKAP2L	NM_152515.2	NM_152515.2		150468	32526889	NM_152515.2	CKAP2L	NP_689728.2	ILMN_1751776	0006380324	S	3016	AGTGCAAGCCCCAGAGACTGTTGTAGGTTGCTTTTTCTTCCTCCTGGGCA	2	-	113212054-113212103	2q13d	Homo sapiens cytoskeleton associated protein 2-like (CKAP2L), mRNA.				MGC39683; FLJ40629	MGC39683; FLJ40629
Homo sapiens	RefSeq	NM_001010868.1	ILMN_10337	C6ORF163	NM_001010868.1	NM_001010868.1		206412	58219542	NM_001010868.1	C6orf163	NP_001010868.1	ILMN_1805932	0003610075	S	1786	GGCCACTCTTGGCAATATGATGGATAAACTGGCTAACACCCAGGGGGAGC	6	+	88131575-88131624	6q15a	Homo sapiens chromosome 6 open reading frame 163 (C6orf163), mRNA.					
Homo sapiens	RefSeq	NM_004196.3	ILMN_7869	CDKL1	NM_004196.3	NM_004196.3		8814	37596296	NM_004196.3	CDKL1	NP_004187.2	ILMN_1724183	0006900315	S	800	TCTTATCCTGCCCTGGGGCTCCTAAAGGGCTGTCTCCACATGGACCCTAC	14	-	50799127-50799150:50801283-50801308	14q22.1b	Homo sapiens cyclin-dependent kinase-like 1 (CDC2-related kinase) (CDKL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 1639063] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [pmid 1639063] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p42; KKIALRE	p42; KKIALRE
Homo sapiens	RefSeq	NM_080687.1	ILMN_9160	UPF3A	NM_080687.1	NM_080687.1		65110	18375524	NM_080687.1	UPF3A	NP_542418.1	ILMN_1705515	0002070026	A	1786	GGCCTCTGAGCCATGGTGTCGAGTGAAGAGTAGTTCTTGTTTGTTACAAC	13	+	114088911-114088960	13q34d	Homo sapiens UPF3 regulator of nonsense transcripts homolog A (yeast) (UPF3A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11163187] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11163187] [evidence NAS]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 11163187] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [pmid 11163187] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	UPF3; RENT3A; HUPF3A	HUPF3A; UPF3; RENT3A
Homo sapiens	RefSeq	NM_000997.4	ILMN_18811	RPL37	NM_000997.4	NM_000997.4		6167	78191800	NM_000997.4	RPL37	NP_000988.1	ILMN_2191634	0001070653	S	1254	CTGGACTGCTGAGTGAGAGGGCAGGGGCAGTTGAAGGGAACATGAATTGC	5	-	40867453-40867502	5p13.1b	Homo sapiens ribosomal protein L37 (RPL37), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 7545944] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 7545944] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC99572; DKFZp686G1699	MGC99572; DKFZp686G1699
Homo sapiens	RefSeq	NM_000592.4	ILMN_11559	C4B	NM_000592.4	NM_000592.4		721	67782350	NM_000592.4	C4B	NP_000583.2	ILMN_1813695	0005820523	S	74	TCTGGGCATCCAGCTTCTTCACCTTATCTCTGCAGAAGCCCAGGTTGCTC	6	+	32084713-32084755:32084888-32084894	6p21.32b	Homo sapiens complement component 4B (Childo blood group) (C4B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process involved in the activation of any of the steps of the complement cascade, which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes; the initial steps of complement activation involve one of three pathways, the classical pathway, the alternative pathway, and the lectin pathway, all of which lead to the terminal complement pathway [goid 6956] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C4B1; CO4; C4B3; CPAMD3; CH; C4F	C4B1; CO4; C4B3; CPAMD3; CH; C4F
Homo sapiens	Unigene	Hs.155579	ILMN_79234	HS.155579	Hs.155579		Hs.155579		27824347	BX090481			ILMN_1917315	0007320133	S	329	GGGCCCAGCAAAGTGTCTACCGGGAGTAGTTGACAAGCCCAGTTGGAGAG	4	-	147218584-147218633		BX090481 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998J114407 ; IMAGE:1734634, mRNA sequence					
Homo sapiens	RefSeq	NM_177947.2	ILMN_15168	ARMCX3	NM_177947.2	NM_177947.2		51566	47578120	NM_177947.2	ARMCX3	NP_808816.1	ILMN_2334765	0007150427	A	2128	CTCTGAGAGCACAGAGGAGGCAAAAGCTTCTGTGGGATGTGCTAGTCGGC	X	+	100768248-100768297	Xq22.1c	Homo sapiens armadillo repeat containing, X-linked 3 (ARMCX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ALEX3; KIAA0443; dJ545K15.2; DKFZp781N1954; MGC12199	ALEX3; KIAA0443; dJ545K15.2; DKFZp781N1954; MGC12199
Homo sapiens	RefSeq	NM_177947.2	ILMN_15168	ARMCX3	NM_177947.2	NM_177947.2		51566	47578120	NM_177947.2	ARMCX3	NP_808816.1	ILMN_2334760	0002320647	A	2499	GAGGGTGTGGCAAAATGGAGCCTTTCACATCCTAGTGGTGGCCATTTGGT	X	+	100768619-100768668	Xq22.1c	Homo sapiens armadillo repeat containing, X-linked 3 (ARMCX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ALEX3; KIAA0443; dJ545K15.2; DKFZp781N1954; MGC12199	ALEX3; KIAA0443; dJ545K15.2; DKFZp781N1954; MGC12199
Homo sapiens	RefSeq	NM_001001967.1	ILMN_177252	OR5D13	NM_001001967.1	NM_001001967.1		390142	50233861	NM_001001967.1	OR5D13	NP_001001967.1	ILMN_1790238	0004280112	S	549	CTCTGTAATTGTTTCTGCCTCCTACTCAGACCCCTATATCAGCCAGAGGC	11	+	55298038-55298087	11q11c	Homo sapiens olfactory receptor, family 5, subfamily D, member 13 (OR5D13), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_003358.1	ILMN_26228	UGCG	NM_003358.1	NM_003358.1		7357	4507810	NM_003358.1	UGCG	NP_003349.1	ILMN_1736939	0003800647	S	1409	AAGCTGGAGAACTGGTCGCTACAGATTACGCTGTGGGGGTACAGCAGAGG	9	+	113735032-113735081	9q31.3b	Homo sapiens UDP-glucose ceramide glucosyltransferase (UGCG), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8643456] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group [goid 6679] [pmid 8643456] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 8643456] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 9545298] [evidence TAS]	Catalysis of the reaction: UDP-glucose + N-acylsphingosine = UDP + D-glucosyl-N-acylsphingosine [goid 8120] [pmid 8643456] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	GCS	GCS
Homo sapiens	RefSeq	NM_018648.2	ILMN_14928	NOP10	NM_018648.3	NM_018648.3		55505	77812675	NM_018648.3	NOP10	NP_061118.1	ILMN_1815479	0006940204	S	332	CTCCGTAACCAAACTCTTCGGACTGTGAGCCCTGATGCCTTTTTGCCAGC	15	-	34634070-34634119	15q14a	Homo sapiens NOP10 ribonucleoprotein homolog (yeast) (NOP10), mRNA.				NOP10; NOP10P; MGC70651	NOP10; NOP10P; MGC70651
Homo sapiens	RefSeq	NM_018648.3	ILMN_14928	NOP10	NM_018648.3	NM_018648.3		55505	77812675	NM_018648.3	NOP10	NP_061118.1	ILMN_3240247	0006650703	S	397	CCAGTCTCTCGTGGCGATTGATTATGCTTGTGTGAGGCAATCATGGTGGC	15	-	34634005-34634054	15q14a	Homo sapiens NOP10 ribonucleoprotein homolog (yeast) (NOP10), mRNA.				NOP10; NOP10P; MGC70651	NOP10; NOP10P; MGC70651
Homo sapiens	RefSeq	NM_004887.3	ILMN_27281	CXCL14	NM_004887.3	NM_004887.3		9547	23199988	NM_004887.3	CXCL14	NP_004878.2	ILMN_1748323	0003520246	S	1801	CCTCTGTACATATACCCTTAAGAACGCCCCCTCCACACACTGCCCCCCAG	5	-	134934392-134934441	5q31.1f	Homo sapiens chemokine (C-X-C motif) ligand 14 (CXCL14), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11256614] [evidence IDA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10049774] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10049774] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10049774] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10049774] [evidence TAS]	SCYB14; KS1; Kec; bolekine; MGC10687; NJAC; MIP-2g; BRAK; BMAC	SCYB14; KS1; Kec; bolekine; MGC10687; NJAC; MIP-2g; BRAK; BMAC
Homo sapiens	RefSeq	XR_041960.1	ILMN_341779	LOC349196	XR_041960.1	XR_041960.1		349196	169173147	XR_041960.1	LOC349196		ILMN_3283904	0002710164	M	595	ACCGTGAATTGGACCGCACTGGGAAACACAGATGAGGAAAGTCAACAACG				8p23.1f	PREDICTED: Homo sapiens misc_RNA (LOC349196), miscRNA.					
Homo sapiens	RefSeq	XR_041960.1	ILMN_341779	LOC349196	XR_041960.1	XR_041960.1		349196	169173147	XR_041960.1	LOC349196		ILMN_3207387	0006860470	A	893	TGAACCAGCACACTGGGGCGTTTTCTCATGTAGCCCAAGTGACCCCATGT				8p23.1f	PREDICTED: Homo sapiens misc_RNA (LOC349196), miscRNA.					
Homo sapiens	RefSeq	XR_015601.1	ILMN_179074	LOC728612	XR_015601.1	XR_015601.1		728612	113416731	XR_015601.1	LOC728612		ILMN_3238777	0006860324	S	1872	CTCCCTCTGCTGGAGCTTCCCCAGGGCCCCCATTGAAGAGGCTGACTAAG	5	+	129505494-129505543	5q23.3c	PREDICTED: Homo sapiens misc_RNA (LOC728612), miscRNA.					
Homo sapiens	RefSeq	NR_002444.1	ILMN_28289	SNORA66	NR_002444.1	NR_002444.1		26782	71795637	NR_002444.1	SNORA66		ILMN_1689616	0003180608	S	10	CGATCACTAGCTCTGCGTGATGTGGCAGAAGCAAAGGGAACCAGGTTTGC	1	+	93078873-93078922	1p22.1c	Homo sapiens small nucleolar RNA, H/ACA box 66 (SNORA66), non-coding RNA.				RNU66; U66	RNU66; U66
Homo sapiens	RefSeq	NM_015613.1	ILMN_5941	LRIT1	NM_015613.2	NM_015613.2		26103	110681720	NM_015613.2	LRIT1	NP_056428.1	ILMN_1684339	0001980148	S	1940	CTTTAGCTCTGACACCTGAGTACACGATCACCCACTCTTACCTGCTCGGG	10	-	85991587-85991636	10q23.1c	Homo sapiens leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 (LRIT1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LRRC21; FIGLER9; DKFZP434K091; PAL	DKFZP434K091; PAL
Homo sapiens	Unigene	Hs.121368	ILMN_75732	HS.121368	Hs.121368		Hs.121368		27823551	BX088952			ILMN_1827396	0001410066	S	115	CCTGCTTCCCCAGCTGTAAATCGAGAGGAGGTGACTGATGAGAGGCCTGC	1	-	161671557-161671606		BX088952 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998J223329 ; IMAGE:1320693, mRNA sequence					
Homo sapiens	RefSeq	XM_929057.1	ILMN_45631	LOC646094	XM_929057.1	XM_929057.1		646094	89025355	XM_929057.1	LOC646094	XP_934150.1	ILMN_1679514	0001300133	S	375	TGTCAATGGATACACCAAAAACAAGATCCCCAGGGCACGCGAGGAGGATG	7	+	97337522-97337548:97339534-97339556		PREDICTED: Homo sapiens similar to Asparagine synthetase [glutamine-hydrolyzing] (Glutamine-dependent asparagine synthetase) (LOC646094), mRNA.					
Homo sapiens	RefSeq	NM_152564.3	ILMN_6024	VPS13B	NM_152564.3	NM_152564.3		157680	35493700	NM_152564.3	VPS13B	NP_689777.3	ILMN_2252705	0005570280	I	4271	CAGGGGAAGGTTGGCAGTCAGGACATTTTGAAGGAGTATTTCTACAATGC	8	+	100217108-100217137:100218069-100218088	8q22.2a-q22.2b	Homo sapiens vacuolar protein sorting 13 homolog B (yeast) (VPS13B), transcript variant 1, mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		COH1; DKFZp313I0811; CHS1; KIAA0532	COH1; DKFZp313I0811; CHS1; KIAA0532
Homo sapiens	RefSeq	NM_152564.3	ILMN_6024	VPS13B	NM_152564.3	NM_152564.3		157680	35493700	NM_152564.3	VPS13B	NP_689777.3	ILMN_2332368	0003840411	A	1188	TGACGATGGCGAGGAAGACTTTGTTGGGAACGATCCTGCATCAACCATGC	8	+	100123420-100123469	8q22.2a-q22.2b	Homo sapiens vacuolar protein sorting 13 homolog B (yeast) (VPS13B), transcript variant 1, mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		COH1; DKFZp313I0811; CHS1; KIAA0532	COH1; DKFZp313I0811; CHS1; KIAA0532
Homo sapiens	RefSeq	NM_021964.1	ILMN_20337	ZNF148	NM_021964.1	NM_021964.1		7707	11415035	NM_021964.1	ZNF148	NP_068799.1	ILMN_2143822	0006520129	S	2724	GAGCTGGGATGACATCTTCACCTGATGCCACAACTGGCCAGACTTTTGGC	3	-	126433865-126433874:126433875-126433914	3q21.2b	Homo sapiens zinc finger protein 148 (ZNF148), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 8355710] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9685330] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 8355710] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 9685330] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	HT-BETA; ZBP-89; BFCOL1; BERF-1; ZFP148; pHZ-52	HT-BETA; ZBP-89; BFCOL1; BERF-1; ZFP148; pHZ-52
Homo sapiens	RefSeq	XM_939880.1	ILMN_34124	LOC650795	XM_939880.1	XM_939880.1		650795	89037605	XM_939880.1	LOC650795	XP_944973.1	ILMN_1790771	0000130661	S	267	CCAAACCTCCTTCCACCTGAAGAAACCATCTGCCCTTGTGAGCGACTCCG					PREDICTED: Homo sapiens similar to T-cell receptor alpha chain V region PY14 precursor (LOC650795), mRNA.					
Homo sapiens	RefSeq	NM_152704.2	ILMN_12688	FAM123A	NM_152704.2	NM_152704.2		219287	40288202	NM_152704.2	FAM123A	NP_689917.2	ILMN_1810131	0000380433	I	1141	CCCTGCCTCTGTCGATCCACCCTCAGACCCGTCGGCAGATCGTATTTGTT	13	-	25744667-25744716	13q12.13a	Homo sapiens family with sequence similarity 123A (FAM123A), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ25477	FLJ25477
Homo sapiens	RefSeq	NM_001047.1	ILMN_46190	SRD5A1	NM_001047.2	NM_001047.2		6715	87044897	NM_001047.2	SRD5A1	NP_001038.1	ILMN_1793241	0001050278	S	1637	CATACGGAGTAAGCTGCTCTGCCTGTGTGAGTGGCTCCTGGGCCCTAAAC	5	+	6669048-6669097	5p15.31c	Homo sapiens steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) (SRD5A1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 6702] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [pmid 1686016] [evidence NAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor [goid 3865] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 1686016] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]		
Homo sapiens	RefSeq	NM_022564.1	ILMN_138742	MMP16	NM_022564.1	NM_022564.1		4325	13027799	NM_022564.1	MMP16	NP_072086.1	ILMN_1791796	0000460398	A	1069	AAATGACAGGCCAAAACCTCCTCGGCCTCCAACCGGCAGACCCTCCTATC	8	-	89197929-89197978	8q21.3b-q21.3c	Homo sapiens matrix metalloproteinase 16 (membrane-inserted) (MMP16), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7559440] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7559440] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 7559440] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [pmid 7559440] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 7559440] [evidence TAS]	MT-MMP3; MT3-MMP; MMP-X2; MT-MMP2	MT-MMP3; MT3-MMP; MMP-X2; MT-MMP2
Homo sapiens	RefSeq	NM_004426.2	ILMN_25625	PHC1	NM_004426.2	NM_004426.2		1911	62953126	NM_004426.2	PHC1	NP_004417.2	ILMN_1796710	0004730209	S	3610	AGAAGTAGCAAAATCTGGTCCTCCCCCCTCCCAGTGTAGCTGTGGCTCAG	12	+	8983761-8983810	12p13.31b	Homo sapiens polyhomeotic homolog 1 (Drosophila) (PHC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9121482] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9121482] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HPH1; EDR1; RAE28	HPH1; EDR1; RAE28
Homo sapiens	RefSeq	XR_015391.1	ILMN_165178	LOC728843	XR_015391.1	XR_015391.1		728843	113416857	XR_015391.1	LOC728843		ILMN_3228788	0001740370	A	116	AGATGCTTTGAAAGGTGAGGAGGAAGCTTACCTAGGAAAAAGCCATGCAC	5	-	165388729-165388778	5q34f	PREDICTED: Homo sapiens misc_RNA (LOC728843), miscRNA.					
Homo sapiens	RefSeq	XR_015391.1	ILMN_165178	LOC728843	XR_015391.1	XR_015391.1		728843	113416857	XR_015391.1	LOC728843		ILMN_3305397	0002600187	M	298	GTGAGCCCAAAGTTCTGAAAGGTGTTGCGGCTCCTTCGCCTTCGTCAAAT	5	-	165388547-165388596	5q34f	PREDICTED: Homo sapiens misc_RNA (LOC728843), miscRNA.					
Homo sapiens	RefSeq	NM_022817.1	ILMN_172880	PER2	NM_022817.2	NM_022817.2		8864	125988407	NM_022817.2	PER2	NP_073728.1	ILMN_1738095	0006040286	I	6168	AGCTCTCAGAGTTTCTGTGATGATTTGTTGAGCCTTGCTGGACAAGTGGT	2	-	239152803-239152852	2q37.3c	Homo sapiens period homolog 2 (Drosophila) (PER2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 9427249] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17218255] [evidence IPI]	KIAA0347; FASPS	KIAA0347; FASPS
Homo sapiens	RefSeq	NM_018958.1	ILMN_167664	C15ORF2	NM_018958.2	NM_018958.2		23742	112421133	NM_018958.2	C15orf2	NP_061831.2	ILMN_1801053	0001690431	S	3766	TCATGCAGTGGTATGGGAGGGGATGGCACCAGATCCATAGTTGGAGGCCC	15	+	22475399-22475448	15q11.2e	Homo sapiens chromosome 15 open reading frame 2 (C15orf2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10783265] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10783265] [evidence ND ]		
Homo sapiens	RefSeq	NM_145918.2	ILMN_8814	CTSL1	NM_145918.2	NM_145918.2		1514	125987604	NM_145918.2	CTSL1	NP_666023.1	ILMN_2374036	0004260386	A	1249	GCATGCATGGGAGGAATTCATCTTCAGTCTACCAGCCCCCGCTGTGTCGG	9	+	89535884-89535933	9q21.33c	Homo sapiens cathepsin L1 (CTSL1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 8419312] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17889653] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MEP; CATL; FLJ31037; CTSL	MEP; CATL
Homo sapiens	RefSeq	NM_004059.3	ILMN_22741	CCBL1	NM_004059.4	NM_004059.4		883	95147550	NM_004059.4	CCBL1	NP_004050.3	ILMN_1764096	0003450040	S	1823	CCTTCCCTGGCTCATCTTGGCCTTGGGGAGTTGCCTTTAGGCTTGAGTCC	9	-	131595444-131595493	9q34.11c	Homo sapiens cysteine conjugate-beta lyase, cytoplasmic (CCBL1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7883047] [evidence TAS]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways involving compounds derived from amino acids, organic acids containing one or more amino substituents [goid 6575] [pmid 7883047] [evidence TAS]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-glutamate [goid 16212] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine = 1-aminocyclopropane-1-carboxylate + methylthioadenosine [goid 16847] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the reaction: phenylpyruvate + L-glutamine = L-phenylalanine + 2-keto-glutaramate [goid 47316] [evidence IEA]; Catalysis of the reaction: RS-CH2-CH(NH3+)COO- = RSH + NH3 + pyruvate [goid 47804] [evidence IEA]	GTK; MGC29624; KATI	GTK; MGC29624; KATI
Homo sapiens	RefSeq	NM_020771.2	ILMN_11188	HACE1	NM_020771.3	NM_020771.3		57531	116875851	NM_020771.3	HACE1	NP_065822.2	ILMN_1740217	0007050403	S	2412	CTGATGTGTTTGGAGCAATGGAAGAGGTGCCTTTGAAACCTGGGGGTGGG	6	-	105325787-105325836	6q21a	Homo sapiens HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 (HACE1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]		
Homo sapiens	RefSeq	XM_001713610.1	ILMN_343321	LOC100134234	XM_001713610.1	XM_001713610.1		100134234	169166592	XM_001713610.1	LOC100134234	XP_001713662.1	ILMN_3242384	0002810750	S	17	CCTCTTCGCCATTTTCTTCTTTATGAGCCAAGTTCTACCAGCCAGGGGCA					PREDICTED: Homo sapiens hypothetical protein LOC100134234 (LOC100134234), mRNA.					
Homo sapiens	Unigene	Hs.581938	ILMN_134119	HS.581938	Hs.581938		Hs.581938		79168395	DA190327			ILMN_1830463	0001510626	S	285	GTGCTCTGATTCCGGCGAGGTTCCCTATGAGAAGCAACATTTCAGCCCAG	4	-	27595448-27595497		DA190327 BRAMY3 Homo sapiens cDNA clone BRAMY3012695 5, mRNA sequence					
Homo sapiens	RefSeq	NM_024094.1	ILMN_3628	DSCC1	NM_024094.1	NM_024094.1		79075	13129095	NM_024094.1	DSCC1	NP_076999.1	ILMN_1776577	0003890372	S	2028	CTCATCACCAGGACAGTTGGAGGGGGTAGGCCGAGGTTAAATGGTCCACG	8	-	120915532-120915581	8q24.12c	Homo sapiens defective in sister chromatid cohesion 1 homolog (S. cerevisiae) (DSCC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	hDCC1; MGC5528; DCC1	hDCC1; MGC5528; DCC1
Homo sapiens	RefSeq	NM_024326.2	ILMN_4176	FBXL15	NM_024326.2	NM_024326.2		79176	71061448	NM_024326.2	FBXL15	NP_077302.2	ILMN_1663379	0007160364	S	2145	CTGGTGCTGCTGCAGGATATGGCGGGCTTCGCACCTTTTGTCAACCTGCA	10	+	104172684-104172733	10q24.32b	Homo sapiens F-box and leucine-rich repeat protein 15 (FBXL15), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FLJ16137; Fbl15; MGC11279; FBXO37; PSD	FLJ16137; Fbl15; MGC11279; FBXO37; PSD
Homo sapiens	Unigene	Hs.148886	ILMN_78758	HS.148886	Hs.148886		Hs.148886		3836306	AI240909			ILMN_1887735	0004280609	S	71	GACTCAGCTTGACTCTTGGCTTCCGGGTTTGAGTGCAGCTCCTGAAGAGG	11	+	435743-435792		qj94h02.x1 NCI_CGAP_Kid3 Homo sapiens cDNA clone IMAGE:1867155 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001005492.1	ILMN_165227	OR5J2	NM_001005492.1	NM_001005492.1		282775	53828704	NM_001005492.1	OR5J2	NP_001005492.1	ILMN_1689611	0004920370	S	571	GACACCTCCATGAATGAGTTGTTGCTGTTAACCTTCTCCGGAGTCATTGC	11	+	55701240-55701289	11q11c	Homo sapiens olfactory receptor, family 5, subfamily J, member 2 (OR5J2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-266	OR11-266
Homo sapiens	RefSeq	NM_000936.2	ILMN_166424	PNLIP	NM_000936.2	NM_000936.2		5406	61676109	NM_000936.2	PNLIP	NP_000927.1	ILMN_1685596	0002190193	S	1386	TCTGTAGTCCAGAAACCGTCAGGGAGGAAGTTCTGCTCACCCTCACACCG	10	+	118308701-118308750	10q25.3b	Homo sapiens pancreatic lipase (PNLIP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; Uptake of cholesterol into the blood by absorption from the small intestine [goid 30299] [evidence IEA]	Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [pmid 1783385] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PL	PL
Homo sapiens	RefSeq	NM_170587.1	ILMN_14554	RGS20	NM_170587.1	NM_170587.1		8601	41281804	NM_170587.1	RGS20	NP_733466.1	ILMN_1738558	0006400403	A	1678	CCAGCAAGCTCGGTTTGAATACGTCACTTACCAGTGCCATTGCAGGACCC	8	+	55033990-55034039	8q11.23d	Homo sapiens regulator of G-protein signaling 20 (RGS20), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9748279] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9748279] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	ZGAP1; RGSZ1	ZGAP1; RGSZ1
Homo sapiens	RefSeq	NM_170587.1	ILMN_14554	RGS20	NM_170587.1	NM_170587.1		8601	41281804	NM_170587.1	RGS20	NP_733466.1	ILMN_1711288	0002490368	I	550	TAGCCAAGCCCAGGGAAGAAGACGCCACCGCTGGGCAGAGCTCGCCTATG	8	+	54954663-54954712	8q11.23d	Homo sapiens regulator of G-protein signaling 20 (RGS20), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9748279] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9748279] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	ZGAP1; RGSZ1	ZGAP1; RGSZ1
Homo sapiens	RefSeq	NM_032409.1	ILMN_27027	PINK1	NM_032409.2	NM_032409.2		65018	112382374	NM_032409.2	PINK1	NP_115785.1	ILMN_1666924	0002490259	S	2169	CACGAGGAACTCGTTTGAAGGGGGCAGCGTAGCATGTCTGATTTGCCACC	1	+	20850100-20850149	1p36.12b	Homo sapiens PTEN induced putative kinase 1 (PINK1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15087508] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 14607334] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 15087508] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 14607334] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 14607334] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 14607334] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 14607334] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ27236; PARK6; BRPK	PARK6; BRPK
Homo sapiens	Unigene	Hs.564103	ILMN_116829	HS.564103	Hs.564103		Hs.564103		21980945	BQ772469			ILMN_1884728	0000770195	S	447	GCACATGCCCATCCGTGTTGTTCTCATGCTCTCAGGGGGTAGAGCTAGTG					UI-H-FE0-bbq-g-24-0-UI.s1 NCI_CGAP_FE0 Homo sapiens cDNA clone UI-H-FE0-bbq-g-24-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NR_002804.1	ILMN_15174	SIGLECP3	NR_002804.1	NR_002804.1		284367	84872090	NR_002804.1	SIGLECP3		ILMN_2209551	0000460717	S	1150	TGTCAGTTTCCACAAGAAGAAGGCGGTGAGGGCAGTGGAGGTTGAGGAGA	19	+	56367580-56367629	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin, pseudogene 3 (SIGLECP3), non-coding RNA.				SIGLECP2; HSPC078	SIGLECP2; HSPC078
Homo sapiens	RefSeq	XR_001419.1	ILMN_15174	SIGLECP3	NR_002804.1	NR_002804.1		284367	84872090	NR_002804.1	SIGLECP3		ILMN_1688672	0007650167	A	1795	GTCTCCCTACACCCACCAGGCCAAGCCCTCTGTGATTCTGAGACTTTGCA	19	+	56368225-56368274	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin, pseudogene 3 (SIGLECP3), non-coding RNA.				SIGLECP2; HSPC078	
Homo sapiens	RefSeq	NM_003547.2	ILMN_928	HIST1H4G	NM_003547.2	NM_003547.2		8369	21166393	NM_003547.2	HIST1H4G	NP_003538.1	ILMN_1712808	0007570468	S	77	ATATTCAGGGCATTACCAAGTGCACTATCCGGCGCTTGGCCCGGCATGGC	6	-	26355058-26355107	6p22.1d	Homo sapiens histone cluster 1, H4g (HIST1H4G), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H4FL; H4/l	H4FL; H4/l
Homo sapiens	RefSeq	XM_935531.1	ILMN_38287	LOC641765	XM_935531.1	XM_935531.1		641765	89027111	XM_935531.1	LOC641765	XP_940624.1	ILMN_1692198	0000020746	S	864	CCGGAACCTCAACACGTACGACATCCACTGGCTGGAGAAGATCCTGAAGG				7q11.21e	PREDICTED: Homo sapiens similar to General transcription factor II-I repeat domain-containing protein 1 (GTF2I repeat domain containing protein 1) (Muscle TFII-I repeat domain-containing protein 1) (General transcription factor III) (Slow-muscle-fiber enhancer binding pro... (LOC641765), mRNA.					
Homo sapiens	RefSeq	XM_931047.1	ILMN_40505	LOC642730	XM_931047.1	XM_931047.1		642730	89028223	XM_931047.1	LOC642730	XP_936140.1	ILMN_1658200	0000110703	S	127	GATTTTGAGTCGTATGGAACCTCAAAGTCTTTGTGACAATGGAAACCAAA	8	-	92061827-92061839:92061840-92061865:92066518-92066528		PREDICTED: Homo sapiens hypothetical protein LOC642730 (LOC642730), mRNA.					
Homo sapiens	RefSeq	NM_006883.1	ILMN_36251	SHOX	NM_006883.2	NM_006883.2		6473	89257356	NM_006883.2	SHOX	NP_006874.1	ILMN_1781679	0005690678	A	996	AGGACGTGAAGTCGGAGGACGAGGACGGGCAGACCAAGCTGAAACAGAGG	Y	+	511246-511295	Xp22.33f,Yp11.32c	Homo sapiens short stature homeobox (SHOX), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9590292] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9259282] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9259282] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	GCFX; SHOXY; SS; PHOG	GCFX; SHOXY; SS; PHOG
Homo sapiens	RefSeq	NM_006883.1	ILMN_36251	SHOX	NM_006883.2	NM_006883.2		6473	89257356	NM_006883.2	SHOX	NP_006874.1	ILMN_1775093	0004180368	I	1875	CCTCCACCTCCCAAAGTGTTAGAATTACAAGCATGAACCACTGCCCGTGG	Y	+	511848-511897	Xp22.33f,Yp11.32c	Homo sapiens short stature homeobox (SHOX), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9590292] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9259282] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9259282] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	GCFX; SHOXY; SS; PHOG	GCFX; SHOXY; SS; PHOG
Homo sapiens	RefSeq	NM_001014794.1	ILMN_15663	ILK	NM_001014794.1	NM_001014794.1		3611	62420872	NM_001014794.1	ILK	NP_001014794.1	ILMN_2358980	0005720487	A	1216	CTGCAGAAGAAGCCTGAAGACACAAACAGACGCTCAGCAGACATGTGGAG	11	+	6587957-6588006	11p15.4c	Homo sapiens integrin-linked kinase (ILK), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Branching of the ureteric bud [goid 1658] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10871859] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence NAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence NAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10871859] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16936772] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18339839] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp686F1765; P59	DKFZp686F1765; P59
Homo sapiens	Unigene	Hs.380737	ILMN_88786	HS.380737	Hs.380737		Hs.380737		10433195	AK021903			ILMN_1897013	0000450746	S	1791	GAGGCTATTGGAGAAAAAATTGGCCACAGGGCCAAGAGGGCTGGGAGGAC	8	-	88811505-88811554		Homo sapiens cDNA FLJ11841 fis, clone HEMBA1006643					
Homo sapiens	RefSeq	XM_943180.1	ILMN_32211	LOC648025	XM_943180.1	XM_943180.1		648025	89037106	XM_943180.1	LOC648025	XP_948273.1	ILMN_1765678	0001410687	S	181	CATTTGTCTGCCTTACCTCATTCATCCTGGACACAGGACAAGAACTTGGG					PREDICTED: Homo sapiens hypothetical protein LOC648025 (LOC648025), mRNA.					
Homo sapiens	RefSeq	NM_024053.3	ILMN_21947	CENPM	NM_024053.3	NM_024053.3		79019	50845412	NM_024053.3	CENPM	NP_076958.1	ILMN_1668814	0006100079	I	420	GTGAAGCTGGCCCACACCTATCAAAGCCCCCTGCTCTACTGTGACCTGGA	22	-	42339614-42339663	22q13.2b	Homo sapiens centromere protein M (CENPM), transcript variant 1, mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			C22orf18; bK250D10.2; PANE1; MGC861; CENP-M	C22orf18; bK250D10.2; PANE1; MGC861; CENP-M
Homo sapiens	RefSeq	NM_004193.1	ILMN_8509	GBF1	NM_004193.1	NM_004193.1		8729	4758415	NM_004193.1	GBF1	NP_004184.1	ILMN_2157544	0006510192	S	5910	GGCCAAGTCAGAGCTGCTGTTGCTGCCACTTGGATGGGGACCTGAAAAAG	10	+	104122321-104122370	10q24.32b	Homo sapiens golgi-specific brefeldin A resistant guanine nucleotide exchange factor 1 (GBF1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 10402461] [evidence EXP]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10402461] [evidence ISS]	The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11031247] [evidence EXP]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 10402461] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; Any process that modulates the frequency, rate or extent of ARF protein signal transduction [goid 32012] [evidence IEA]; The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat [goid 48205] [pmid 16956762] [evidence EXP]	Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [pmid 10402461] [evidence ISS]; Stimulates the exchange of guanyl nucleotides by the GTPase ARF. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5086] [pmid 10402461] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	KIAA0248; MGC134878; FLJ21500; MGC134877; FLJ21263	KIAA0248; MGC134878; FLJ21500; MGC134877; FLJ21263
Homo sapiens	Unigene	Hs.566889	ILMN_119132	HS.566889	Hs.566889		Hs.566889		4888456	AI678274			ILMN_1905938	0002000315	S	64	CCAGAAACCCAAAACCCAAATGTCATCAGGACCATACTCCCTTTGGGGGC					wc25h07.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2316253 3, mRNA sequence					
Homo sapiens	RefSeq	NM_017436.4	ILMN_25424	A4GALT	NM_017436.4	NM_017436.4		53947	55956926	NM_017436.4	A4GALT	NP_059132.1	ILMN_1735045	0003610072	S	1993	TCTTTAGGCTCAGGAGAAGCATTTTAAAGAAACCCCCACCCTGCCGCCCG	22	-	43088176-43088225	22q13.2b	Homo sapiens alpha 1,4-galactosyltransferase (A4GALT), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10748143] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 10748143] [evidence NAS]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 10748143] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the plasma membrane [goid 7009] [pmid 10747952] [evidence IDA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 10747952] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: beta-D-galactosyl-(1,4)-D-glucosylceramide + UDP-galactose = alpha-D-galactosyl-(1,4)-beta-D-galactosyl-(1,4)-D-glucosylceramide + UDP [goid 50512] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	P1; A14GALT; A4GALT1; PK	P1; A14GALT; A4GALT1; PK
Homo sapiens	RefSeq	NM_133492.1	ILMN_25043	ACER1	NM_133492.1	NM_133492.1		125981	19424127	NM_133492.1	ACER1	NP_597999.1	ILMN_1773243	0000650131	S	465	CATCGTGTGCCAGGAGTACAGGAAGACCAGCAATAAGGAGCTTCGGCACC	19	-	6258275-6258301:6260708-6260730	19p13.3a	Homo sapiens alkaline ceramidase 1 (ACER1), mRNA.				MGC138329; ACER1; MGC138327	MGC138329; ACER1; MGC138327
Homo sapiens	RefSeq	NM_133492.1	ILMN_25043	ACER1	NM_133492.1	NM_133492.1		125981	19424127	NM_133492.1	ACER1	NP_597999.1	ILMN_3241214	0003360019	S	398	TTCTGTCCTTCCTGCGGCCCACGGTCAACGCCTACGCCCTCAACAGCATT	19	-	6260748-6260797	19p13.3a	Homo sapiens alkaline ceramidase 1 (ACER1), mRNA.				MGC138329; ACER1; MGC138327	MGC138329; ACER1; MGC138327
Homo sapiens	RefSeq	XM_936303.1	ILMN_11947	LOC391766	XM_373077.2	XM_373077.2		391766	51464887	XM_373077.2	LOC391766	XP_373077.2	ILMN_1705779	0003830474	A	339	CCGGTCAGCTTTCCCAAGAGCACGCATTGCGGGTCTGATGCGGTCTATCA	5	+	17665233-17665282	5p15.1a	PREDICTED: Homo sapiens similar to TBP-associated factor 11 (LOC391766), mRNA.					
Homo sapiens	RefSeq	XM_936355.1	ILMN_307686	FKBP15	NM_015258.1	NM_015258.1		23307	150010551	NM_015258.1	FKBP15	NP_056073.1	ILMN_1804863	0003180382	A	3987	CACTGGGATTTCAGCAGCAAGTTGGAAGAAGGACTGGTAGGTTCCCCTCC	9	-	115928099-115928148	9q32b-q32c	Homo sapiens FK506 binding protein 15, 133kDa (FKBP15), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]		FKBP133; KIAA0674	
Homo sapiens	RefSeq	NM_018491.3	ILMN_18677	CBWD1	NM_018491.3	NM_018491.3		55871	126722883	NM_018491.3	CBWD1	NP_060961.3	ILMN_2152010	0003370021	S	1228	AGCTACTGTGACAGAAACAGAAAAGCAGTGGACAACACGTTTCCAAGAAG	9	-	154735-154784	9p24.3b	Homo sapiens COBW domain containing 1 (CBWD1), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_001024916.1	ILMN_18677	CBWD1	NM_018491.3	NM_018491.3		55871	126722883	NM_018491.3	CBWD1	NP_060961.3	ILMN_1802907	0003890035	S	484	GAAGGGGAAATTTGATTACATACTGTTAGAGACCACTGGATTAGCAGACC	9	-	172083-172132	9p24.3b	Homo sapiens COBW domain containing 1 (CBWD1), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	XM_001714225.1	ILMN_339788	LOC100128859	XM_001714225.1	XM_001714225.1		100128859	169169136	XM_001714225.1	LOC100128859	XP_001714277.1	ILMN_3258657	0006660148	M	470	TGTAGTGGCGTGGTGTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAA				6q13c	PREDICTED: Homo sapiens hypothetical LOC100128859 (LOC100128859), mRNA.					
Homo sapiens	Unigene	Hs.539677	ILMN_104669	HS.539677	Hs.539677		Hs.539677		5812847	AI985570			ILMN_1894710	0004260521	S	32	GGGGAGAGGCTGTGGAAGGAGGAGAGGGTAACGGATACAAGCTATAACTC	13	+	59132818-59132867		ws07h09.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2496545 3, mRNA sequence					
Homo sapiens	RefSeq	NM_019849.1	ILMN_6485	SLC7A10	NM_019849.1	NM_019849.1		56301	9790234	NM_019849.1	SLC7A10	NP_062823.1	ILMN_1681087	0006450600	S	1626	ACCCTCCCTGCTGCCTGCCACAGACAAGCCCTCGAAGCCACAATGAGATT	19	-	38391632-38391636:38391637-38391681	19q13.11b	Homo sapiens solute carrier family 7, (neutral amino acid transporter, y+ system) member 10 (SLC7A10), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10863037] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10734121] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells [goid 15804] [pmid 10863037] [evidence IDA]; The directed movement of D-alanine, the dextrorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells [goid 42941] [evidence IEA]; The directed movement of D-serine, the dextrorotatory isomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells [goid 42942] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of L-serine from one side of a membrane to the other. L-serine is the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 15194] [pmid 10863037] [evidence TAS]	asc-1; FLJ20839; HASC-1	asc-1; FLJ20839; HASC-1
Homo sapiens	RefSeq	NM_001564.2	ILMN_180405	ING2	NM_001564.2	NM_001564.2		3622	59814661	NM_001564.2	ING2	NP_001555.1	ILMN_2085722	0006960382	S	700	CGCTCCAAGGCCAAGCAGGAAAGGGAAGCTTCACCTGTTGAGTTTGCAAT	4	+	184431833-184431882	4q35.1c	Homo sapiens inhibitor of growth family, member 2 (ING2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15243141] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [pmid 10072587] [evidence TAS]; A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; in Saccharomyces it activates the transcription of genes in response to growth in a nonfermentable carbon source; consists of four known subunits: HAP2, HAP3, HAP4 and HAP5 [goid 16602] [pmid 15243141] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 15243141] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10072587] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 15243141] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 10072587] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	p33ING2; ING1L	p33ING2; ING1L
Homo sapiens	RefSeq	NM_018074.4	ILMN_180471	CCDC94	NM_018074.4	NM_018074.4		55702	142360381	NM_018074.4	CCDC94	NP_060544.2	ILMN_3245310	0002650471	S	1097	TTGGCGTGACTGGAGGCCGGACAGACAAGCGCCAGCGTGCTCCAACACAT	19	+	4219785-4219834	19p13.3d	Homo sapiens coiled-coil domain containing 94 (CCDC94), mRNA.				FLJ10374	FLJ10374
Homo sapiens	RefSeq	NM_020546.1	ILMN_691	ADCY2	NM_020546.2	NM_020546.2		108	115387101	NM_020546.2	ADCY2	NP_065433.2	ILMN_1810691	0002970288	S	5978	GCAGTGCACCTCTCATCAGCCCAGGTCCCAGTGCCATTGGCTTCAAGAAA	5	+	7827168-7827217	5p15.31b-p15.31a	Homo sapiens adenylate cyclase 2 (brain) (ADCY2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]	The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [pmid 1427768] [evidence NAS]	KIAA1060; FLJ16822; HBAC2; FLJ45092; MGC133314	KIAA1060; HBAC2
Homo sapiens	RefSeq	NM_006190.3	ILMN_182860	ORC2L	NM_006190.3	NM_006190.3		4999	32454751	NM_006190.3	ORC2L	NP_006181.1	ILMN_2061452	0006620475	S	2689	TATTGTCTGTGCCATGACCTTCATGATACCAGTGAGAAGCCAGGCTAGAG	2	-	201775276-201775325	2q33.1e	Homo sapiens origin recognition complex, subunit 2-like (yeast) (ORC2L), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The region of a condensed chromosome kinetochore closest to centromeric DNA; in mammals the CREST antigens (CENP proteins) are found in this layer; this layer may help define underlying centromeric chromatin structure and position of the kinetochore on the chromosome [goid 939] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8808289] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15684404] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11125146] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8808289] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [pmid 8808289] [evidence TAS]	Interacting selectively with the DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally [goid 3688] [pmid 8808289] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11095689] [evidence IPI]	ORC2	ORC2
Homo sapiens	RefSeq	NM_003482.1	ILMN_171437	MLL2	NM_003482.3	NM_003482.3		8085	148762968	NM_003482.3	MLL2	NP_003473.3	ILMN_1802743	0000060673	S	16294	CGGAACGAGGTGGCCAACCGGCGGGAGAAAATCTACGAAGAGCAGAATCG	12	-	49416131-49416136:49416373-49416416	12q13.12a-q13.12b	Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 2 (MLL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9247308] [evidence NAS]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [pmid 14992727] [evidence IPI]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9247308] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9247308] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16603732] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ALR; MLL4; AAD10	ALR; AAD10
Homo sapiens	RefSeq	NM_005588.1	ILMN_183294	MEP1A	NM_005588.2	NM_005588.2		4224	153070261	NM_005588.2	MEP1A	NP_005579.2	ILMN_1659984	0001820176	S	2597	GTGCTGGCCCCAGTGCCTAGATGCATGGCTGGCACATTGTTGGCACTCAA	6	+	46807187-46807236	6p12.3e	Homo sapiens meprin A, alpha (PABA peptide hydrolase) (MEP1A), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8262185] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8262185] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8262185] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 9288916] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 9288916] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PPHA	PPHA
Homo sapiens	Unigene	Hs.554282	ILMN_111874	HS.554282	Hs.554282		Hs.554282		46283500	BX344951			ILMN_1825229	0001690246	S	79	GGGACACATAGAACCAGGCATTTGCTGAAGGACACCTGGATTGCACAACC	5	+	96793280-96793329		BX344951 Homo sapiens NEUROBLASTOMA COT 25-NORMALIZED Homo sapiens cDNA clone CS0DC008YA17 5-PRIME, mRNA sequence					
Homo sapiens	RefSeq	XM_943168.1	ILMN_33241	LOC647989	XM_943168.1	XM_943168.1		647989	88957849	XM_943168.1	LOC647989	XP_948261.1	ILMN_1758063	0006110288	S	1	ATGGCAAGCTGGCCCATAGGGTCGTCCCTAGCACCTACCAGAGCGCGTAC					PREDICTED: Homo sapiens hypothetical LOC647989 (LOC647989), mRNA.					
Homo sapiens	RefSeq	NM_005597.2	ILMN_22629	NFIC	NM_205843.1	NM_205843.1		4782	45505150	NM_205843.1	NFIC	NP_995315.1	ILMN_1675130	0001850259	A	1680	GCCGACTCCCAGCCCGGCCAAAAAGACAAAACACATAGACGCACACACTC	19	+	3400095-3400137:3403480-3403486	19p13.3f	Homo sapiens nuclear factor I/C (CCAAT-binding transcription factor) (NFIC), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8710515] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7590749] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8710515] [evidence TAS]	CTF5; CTF; NF-I; NFI; MGC20153	CTF5; CTF; NF-I; NFI; MGC20153
Homo sapiens	RefSeq	NM_205843.1	ILMN_22629	NFIC	NM_205843.1	NM_205843.1		4782	45505150	NM_205843.1	NFIC	NP_995315.1	ILMN_1814402	0003800228	I	1323	CAGCTCAAAATGCCCAGCCACTGCCTTTCTGCTCAGATGCTGGCACCTCC	19	+	3384566-3384590:3385275-3385299	19p13.3f	Homo sapiens nuclear factor I/C (CCAAT-binding transcription factor) (NFIC), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8710515] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7590749] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8710515] [evidence TAS]	CTF5; CTF; NF-I; NFI; MGC20153	CTF5; CTF; NF-I; NFI; MGC20153
Homo sapiens	RefSeq	XM_001719987.1	ILMN_340930	LOC100128693	XM_001719987.1	XM_001719987.1		100128693	169170996	XM_001719987.1	LOC100128693	XP_001720039.1	ILMN_3259973	0007160537	M	241	TTGGCCAGGCCTGCTTTTAAGGATGCCCCAGGTCCAGAAAATCAGGGCCA	7	+	148617303-148617352	7q36.1b	PREDICTED: Homo sapiens hypothetical protein LOC100128693 (LOC100128693), mRNA.					
Homo sapiens	RefSeq	NM_024104.2	ILMN_26408	C19ORF42	NM_024104.3	NM_024104.3		79086	115430212	NM_024104.3	C19orf42	NP_077009.2	ILMN_1694759	0001300041	S	1118	GAAAGGGAATCCTGGTTTTGTTGCCAAAATGAAACGCCCGGGGTTGGCGC	19	-	16757164-16757213	19p13.11f	Homo sapiens chromosome 19 open reading frame 42 (C19orf42), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC2747	
Homo sapiens	RefSeq	NM_001039517.1	ILMN_39816	C1ORF104	NM_001039517.1	NM_001039517.1		284618	87252716	NM_001039517.1	C1orf104	NP_001034606.1	ILMN_2114185	0006590736	S	511	ATGCAGGAAAGGGGTGGGGGCTGGAGAGGAAAAGGATGGAGCAGCCGTCA	1	-	155290996-155291045	1q22a	Homo sapiens chromosome 1 open reading frame 104 (C1orf104), mRNA.				FLJ35976; RP11-21N7.3	FLJ35976; RP11-21N7.3
Homo sapiens	RefSeq	NM_000607.1	ILMN_17138	ORM1	NM_000607.1	NM_000607.1		5004	9257231	NM_000607.1	ORM1	NP_000598.1	ILMN_1696584	0002850315	S	404	ACGTGGGAGGCCAAGAGCATTTCGCTCACTTGCTGATCCTCAGGGACACC	9	+	116126187-116126189:116126891-116126937	9q32d	Homo sapiens orosomucoid 1 (ORM1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3360326] [evidence TAS]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [pmid 2822385] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 3360326] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16272158] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	AGP1; ORM; AGP-A	AGP1; ORM; AGP-A
Homo sapiens	Unigene	Hs.126573	ILMN_76289	HS.126573	Hs.126573		Hs.126573		27835565	BX109006			ILMN_1877939	0001740259	S	341	TGGTGCAGGGAAGGTGTAAGGGGAAAGAGTTAAGTGGGTCACTTTGAAGC	9	-	108853763-108853812		BX109006 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGp998C013947, mRNA sequence					
Homo sapiens	RefSeq	XR_038378.1	ILMN_338359	LOC100132519	XR_038378.1	XR_038378.1		100132519	169184376	XR_038378.1	LOC100132519		ILMN_3238401	0004490646	S	426	GCAGGGACAGGGTAGCACGGGGCCAAGACAGGGTCAGGATGGGACCAGAG	9	-	67033666-67033715	9q12g	PREDICTED: Homo sapiens misc_RNA (LOC100132519), miscRNA.					
Homo sapiens	RefSeq	NM_021644.2	ILMN_20029	HNRPH3	NM_021644.2	NM_021644.2		3189	14141158	NM_021644.2	HNRPH3	NP_067676.2	ILMN_2341645	0005820370	A	1989	GTAAGCAACAAGTCCATGTCATAGTCAATAAAAACAATCCTGCAGTTGGG	10	+	69772692-69772741	10q21.3d	Homo sapiens heterogeneous nuclear ribonucleoprotein H3 (2H9) (HNRPH3), transcript variant 2H9A, mRNA.				2H9; FLJ34092	2H9; FLJ34092
Homo sapiens	RefSeq	NM_182595.2	ILMN_12043	DKFZP564N2472	NM_182595.2	NM_182595.2		285877	57242763	NM_182595.2	DKFZp564N2472	NP_872401.2	ILMN_1737131	0004260592	S	1084	AGCTGTTGATTTCAGAACCCTTGCCTTCGCCCTGCTGGCCCTCTCCTCCC	7	+	53071926-53071975	7p12.1a	Homo sapiens hypothetical protein DKFZp564N2472 (DKFZp564N2472), mRNA.					
Homo sapiens	RefSeq	XM_946210.1	ILMN_32372	LOC651576	XM_946210.1	XM_946210.1		651576	88952653	XM_946210.1	LOC651576	XP_951303.1	ILMN_1674859	0004540440	I	671	AGCAAAGGTTCTGGTGTCTGGCGTTCCCTTGGGGAATGAACCAGCTTGTC					PREDICTED: Homo sapiens similar to tubulin, alpha 8 like, transcript variant 2 (LOC651576), mRNA.					
Homo sapiens	RefSeq	NM_018490.1	ILMN_9102	LGR4	NM_018490.1	NM_018490.1		55366	8923700	NM_018490.1	LGR4	NP_060960.1	ILMN_1710408	0004560609	S	3215	AGGCCTGTGGACGAGCCTGCTTCTACCAGAGTAGAGGATTCCCTTTGGTG	11	-	27346025-27346074	11p14.1d	Homo sapiens leucine-rich repeat-containing G protein-coupled receptor 4 (LGR4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IEA]; The process by which the anatomical structures of a tube are generated and organized. Morphogenesis pertains to the creation of form. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system [goid 35239] [evidence IEA]; The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances [goid 50673] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]	GPR48	GPR48
Homo sapiens	RefSeq	NR_031645.1	ILMN_388720	MIR548F4	NR_031645.1	NR_031645.1		100313895	269847249	NR_031645.1	MIR548F4		ILMN_3310226	0006400730	S	49	TAAAAGTAATGACAAAAACTGTAATTACTTTTGGAACAATATTAATAGAA					Homo sapiens microRNA 548f-4 (MIR548F4), microRNA.					
Homo sapiens	RefSeq	NM_000538.2	ILMN_176088	RFXAP	NM_000538.2	NM_000538.2		5994	19924157	NM_000538.2	RFXAP	NP_000529.1	ILMN_2233180	0000430017	S	2614	TGTGATGATGAGTAATTGTCAGACGTGGGATAGATAACTGAGAGGCTCAG	13	+	36301529-36301578	13q13.3b	Homo sapiens regulatory factor X-associated protein (RFXAP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9118943] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9118943] [evidence TAS]		
Homo sapiens	RefSeq	NM_000538.2	ILMN_176088	RFXAP	NM_000538.2	NM_000538.2		5994	19924157	NM_000538.2	RFXAP	NP_000529.1	ILMN_1652735	0005050044	S	1411	GCAGTGTCAGGGGTAGTCCCACATACTAAAGATTGTCTCACCCGCAGTGC	13	+	36300326-36300375	13q13.3b	Homo sapiens regulatory factor X-associated protein (RFXAP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9118943] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9118943] [evidence TAS]		
Homo sapiens	RefSeq	NM_000348.2	ILMN_166226	SRD5A2	NM_000348.3	NM_000348.3		6716	116805345	NM_000348.3	SRD5A2	NP_000339.2	ILMN_1788895	0006350035	S	2136	TGCAAACTCTTGTGAAGGGGTCACCCCAGCATGAGTGCTGAGATATGGAC	2	-	31749915-31749964	2p23.1a	Homo sapiens steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2) (SRD5A2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 6702] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 1944596] [evidence TAS]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 1944596] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure [goid 30539] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor [goid 3865] [evidence IEA]; Catalysis of the removal of a C-5 double bond in the B ring of a sterol [goid 9917] [pmid 1944596] [evidence IDA]	MGC138457	
Homo sapiens	RefSeq	XM_942146.1	ILMN_21153	LOC285074	NM_001012626.1	NM_001012626.1		285074	60460917	NM_001012626.1	LOC285074	NP_001012644.1	ILMN_1729269	0000730626	S	734	GAGTGCGCATCCTGTCCGTGTCAATGTAGTGCAGTACCCAGAGCTCAGTG	2	-	87130227-87130276	2p11.2e	Homo sapiens hypothetical protein LOC285074 (LOC285074), mRNA.					
Homo sapiens	RefSeq	NM_001012626.1	ILMN_21153	LOC285074	NM_001012626.1	NM_001012626.1		285074	60460917	NM_001012626.1	LOC285074	NP_001012644.1	ILMN_2278433	0002810093	I	1847	TGTGAGTGAGGAAGGCTTTGAGATGGTTTCAGCCCTAGCCACCACTGACC	2	-	87111369-87111418	2p11.2e	Homo sapiens hypothetical protein LOC285074 (LOC285074), mRNA.					
Homo sapiens	RefSeq	NM_003835.1	ILMN_166695	RGS9	NM_001081955.1	NM_001081955.1		8787	126366079	NM_001081955.1	RGS9	NP_001075424.1	ILMN_1754468	0001230520	S	2082	CGGGCCACAGAAAAGGAGGTCATCTGCCCCTGGGAGAGCCTGTAAGGAAA	17	+	60653943-60653987:60653988-60653992	17q24.1a	Homo sapiens regulator of G-protein signaling 9 (RGS9), transcript variant 2, mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9765512] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9765512] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PERRS; RGS9L; MGC26458; MGC111763	PERRS; RGS9L; MGC111763; MGC26458
Homo sapiens	RefSeq	NM_004190.1	ILMN_3032	LIPF	NM_004190.1	NM_004190.1		8513	4758675	NM_004190.1	LIPF	NP_004181.1	ILMN_1781517	0005260672	S	959	TTATGACTGGGGAAGCCCAGTTCAGAATAGGATGCACTATGATCAGTCCC	10	+	90425972-90426017:90428182-90428185	10q23.31a-q23.31b	Homo sapiens lipase, gastric (LIPF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [pmid 3304425] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a fatty acid anion [goid 4806] [pmid 3304425] [evidence TAS]; Interacting selectively with a lipid [goid 8289] [pmid 2753032] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HLAL; HGL	HGL; HLAL
Homo sapiens	RefSeq	NM_173050.1	ILMN_9010	SCUBE1	NM_173050.2	NM_173050.2		80274	120587028	NM_173050.2	SCUBE1	NP_766638.2	ILMN_1739714	0002850167	S	2969	GCCCAGGAATCCAAGGAGATGTTCCCACGGTCCTTCATCAAACTGCTGCG	22	-	43600039-43600088	22q13.2c	Homo sapiens signal peptide, CUB domain, EGF-like 1 (SCUBE1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 12270931] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [pmid 12270931] [evidence IDA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [pmid 12270931] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12270931] [evidence NAS]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [pmid 12270931] [evidence NAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 12270931] [evidence NAS]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [pmid 12270931] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 45446] [pmid 12270931] [evidence NAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 12270931] [evidence IPI]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 12270931] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 12270931] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 12270931] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15234972] [evidence IPI]		
Homo sapiens	RefSeq	NR_031595.1	ILMN_388520	MIR1226	NR_031595.1	NR_031595.1		100302232	269847038	NR_031595.1	MIR1226		ILMN_3309649	0000540167	S	25	GCAGCTGGGATGGTCCAAAAGGGTGGCCTCACCAGCCCTGTGTTCCCTAG					Homo sapiens microRNA 1226 (MIR1226), microRNA.					
Homo sapiens	RefSeq	XM_928013.1	ILMN_138784	ACBD7	XM_928013.1	XM_928013.1		414149	89030810	XM_928013.1	ACBD7	XP_933106.1	ILMN_1726388	0000630678	A	2243	GGCAGCAGGAGGGATGATCCTGCAGTGATGGAATGTTCTGTCTTGATTGT	10	-	15157561-15157610	10p13c	PREDICTED: Homo sapiens acyl-Coenzyme A binding domain containing 7 (ACBD7), mRNA.			Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]		
Homo sapiens	RefSeq	XM_931607.1	ILMN_36720	LOC647747	XM_942998.1	XM_942998.1		647747	88988805	XM_942998.1	LOC647747	XP_948091.1	ILMN_1741586	0006940091	S	61	TGCCGCCGAGAAAAGGGGGCGGAGGAAGAGCCTCGGCACAGCCCCCAACG					PREDICTED: Homo sapiens hypothetical LOC647747 (LOC647747), mRNA.					
Homo sapiens	RefSeq	XM_928258.1	ILMN_167029	LOC729162	XM_001129521.1	XM_001129521.1		729162	113429700	XM_001129521.1	LOC729162	XP_001129521.1	ILMN_1671338	0004920554	S	5	GGAGCTACCCCTGGAGTGCAGAACCTACGGATGCAGAGAAGAGGGGCGGA	X	-	3848868-3848875:3867071-3867112	Xp22.33a	PREDICTED: Homo sapiens hypothetical protein LOC729162 (LOC729162), mRNA.					
Homo sapiens	RefSeq	XM_943521.1	ILMN_36983	LOC648955	XM_943521.1	XM_943521.1		648955	89040814	XM_943521.1	LOC648955	XP_948614.1	ILMN_1723379	0000940768	S	158	GGCTGTATTCCAGGACGTTGGGAAAGAACGGATCTTCCAGCTCCCAGGGA					PREDICTED: Homo sapiens hypothetical protein LOC648955 (LOC648955), mRNA.					
Homo sapiens	RefSeq	XM_942869.1	ILMN_44567	BOAT	XM_942869.2	XM_942869.2		342371	113426493	XM_942869.2	BOAT	XP_947962.1	ILMN_1728780	0002570528	S	20	CGGACACACTGAGTGACCACAGGACTTCCTTCTTGGCCAAACTGAGAGAG				16q22.3a	PREDICTED: Homo sapiens brother of ataxin-1 (BOAT), mRNA.					
Homo sapiens	RefSeq	XM_944791.1	ILMN_32575	GPR125	XM_944791.1	XM_944791.1		166647	88979523	XM_944791.1	GPR125	XP_949884.1	ILMN_1787648	0002060707	I	1445	CTTATTCTGTGTGTGCTGTGGCCTTCACCCTGTAGTTAACCTGTGCCCTC				4p15.31b	PREDICTED: Homo sapiens G protein-coupled receptor 125, transcript variant 4 (GPR125), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_937513.1	ILMN_44767	LOC653937	XM_937513.1	XM_937513.1		653937	89061152	XM_937513.1	LOC653937	XP_942606.1	ILMN_1724283	0007570091	S	283	TTGTTTAGGCAAGGAGCCTGTAGCCCCGGACGATGGCTTGACTTGCACTG					PREDICTED: Homo sapiens similar to CD99 antigen-like 2 (LOC653937), mRNA.					
Homo sapiens	RefSeq	NM_020070.2	ILMN_6192	IGLL1	NM_152855.1	NM_152855.1		3543	23110979	NM_152855.1	IGLL1	NP_690594.1	ILMN_1656713	0001260309	A	208	TCTGGCCGTGGTAACCCATGGCCTGCTGCGCCCAACAGCTGCATCGCAGA	22	-	23922238-23922287	22q11.23a	Homo sapiens immunoglobulin lambda-like polypeptide 1 (IGLL1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 2501791] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2501791] [evidence NAS]		IGO; IGVPB; IGLL; CD179b; IGL1; VPREB2; IGL5; 14.1; IGLJ14.1	IGO; IGVPB; IGLL; CD179b; IGL1; VPREB2; IGL5; 14.1; IGLJ14.1
Homo sapiens	RefSeq	NM_020655.2	ILMN_26563	JPH3	NM_020655.2	NM_020655.2		57338	21704282	NM_020655.2	JPH3	NP_065706.2	ILMN_1688801	0000290703	S	3647	AACAGGTTCCTTATGTTTCTGCCTTCTCCACCAGGGTCGCTCCATCACCC	16	+	86288913-86288962	16q24.2a	Homo sapiens junctophilin 3 (JPH3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10891348] [evidence NAS]	Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	HDL2; CAGL237; JP3; FLJ44707; JP-3; TNRC22	HDL2; CAGL237; JP3; FLJ44707; JP-3; TNRC22
Homo sapiens	RefSeq	NR_030590.1	ILMN_388068	MIR891B	NR_030590.1	NR_030590.1		100126304	262206018	NR_030590.1	MIR891B		ILMN_3310286	0002230717	S	6	TCCTTGCAACTTACCTGAGTCATTGATTCAGTAAAACATTCAATGGCACA				Xq27.3c	Homo sapiens microRNA 891b (MIR891B), microRNA.					
Homo sapiens	RefSeq	XM_001127882.1	ILMN_180173	LOC728597	XM_001127882.1	XM_001127882.1		728597	113412791	XM_001127882.1	LOC728597	XP_001127882.1	ILMN_3233058	0006330114	I	1547	TTTGGTTGCCGGTGATTCTGATTTCCATCGACTTTGAGGCAGTGGAGTGA	2	+	3796269-3796318	2p25.3a	PREDICTED: Homo sapiens hypothetical LOC728597 (LOC728597), mRNA.					
Homo sapiens	RefSeq	Hs.444330	ILMN_163036	LOC645694	XR_017010.1	XR_017010.1		645694	113413224	XR_017010.1	LOC645694		ILMN_1858692	0000010082	S	1243	TGGGCCTGGACTGTAGAAGCAGCAGAGCCAAGGTTCTCAAGAAAGACAGC	2	+	118377507-118377556	2q14.1d	PREDICTED: Homo sapiens hypothetical LOC645694 (LOC645694), mRNA.					
Homo sapiens	RefSeq	NM_033262.3	ILMN_24218	SLC8A3	NM_033262.3	NM_033262.3		6547	33946309	NM_033262.3	SLC8A3	NP_150287.1	ILMN_1696056	0001990400	I	2590	GAATTACTTCATTGAGATGATGGGCCCCCGCATGGTGGATATGAGTTTTC	14	-	70530545-70530594	14q24.2a	Homo sapiens solute carrier family 8 (sodium/calcium exchanger), member 3 (SLC8A3), transcript variant a, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NCX3	NCX3
Homo sapiens	RefSeq	NM_172088.1	ILMN_16363	TNFSF13	NM_172088.1	NM_172088.1		8741	26051247	NM_172088.1	TNFSF13	NP_742085.1	ILMN_1784264	0002140040	A	1453	CTCTCTCCACATGGAACCTTCCTGGGACTTTGATTTTACGGATATCTTGC	17	+	7404833-7404858:7405040-7405046:7405047-7405063	17p13.1d	Homo sapiens tumor necrosis factor (ligand) superfamily, member 13 (TNFSF13), transcript variant gamma, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9743536] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9743536] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgA isotypes [goid 48298] [pmid 14988498] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	UNQ383/PRO715; ligand; CD256; APRIL; TRDL-1; TALL2	UNQ383/PRO715; ligand; CD256; APRIL; TRDL-1; TALL2
Homo sapiens	Unigene	Hs.541226	ILMN_105611	HS.541226	Hs.541226		Hs.541226		2220697	AA489813			ILMN_1868983	0001450424	S	473	AGTGATGGGGATGGGGACCAGGGTGATGTCAGAGGAGGGTGTCGGAAACA					ab01h06.s1 Stratagene fetal retina 937202 Homo sapiens cDNA clone IMAGE:839579 3 similar to contains Alu repetitive element;, mRNA sequence					
Homo sapiens	RefSeq	XM_001717038.1	ILMN_347171	LOC100128648	XM_001717038.1	XM_001717038.1		100128648	169169581	XM_001717038.1	LOC100128648	XP_001717090.1	ILMN_3190570	0007650044	A	414	GGTAGGGCGAGGGGATGTCGCTGAAGGCCTTCTCCGGAAGCAGGGAGTTG	6	+	13473220-13473269	6p24.1a-p23b	PREDICTED: Homo sapiens hypothetical protein LOC100128648 (LOC100128648), mRNA.					
Homo sapiens	RefSeq	NM_030803.5	ILMN_24221	ATG16L1	NM_030803.5	NM_030803.5		55054	31742529	NM_030803.5	ATG16L1	NP_110430.4	ILMN_1725707	0002760491	A	3126	GATGGTCCTGGCCTCCACCTGCCCTCTCTTCCCTGCCTGATCACCGCTTT	2	+	233868865-233868914	2q37.1d	Homo sapiens ATG16 autophagy related 16-like 1 (S. cerevisiae) (ATG16L1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 15620219] [evidence ISS]; A cellular membrane associated with the pre-autophagosomal structure [goid 34045] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 15620219] [evidence NAS]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 15620219] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	ATG16L; APG16L; WDR30; FLJ00045; FLJ10035; FLJ10828; FLJ22677	ATG16L; APG16L; WDR30; FLJ00045; FLJ10035; FLJ10828; FLJ22677
Homo sapiens	RefSeq	NM_005003.2	ILMN_14128	NDUFAB1	NM_005003.2	NM_005003.2		4706	39753951	NM_005003.2	NDUFAB1	NP_004994.1	ILMN_2179018	0004860563	S	517	CTTTGCTGAGAGAGGACTCAGATGATAGTGACGAATGTCTGGCAGTGAGG	16	-	23592435-23592484	16p12.1c	Homo sapiens NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa (NDUFAB1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [evidence ISS]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence ISS]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [pmid 10234612] [evidence NAS]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence ISS]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [pmid 10234612] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Enables the directed movement of acyl groups into, out of, within or between cells [goid 36] [pmid 10234612] [evidence NAS]; Interacting selectively with fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 5504] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10234612] [evidence NAS]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]; Interacting selectizely with phosphopantetheine, the vitamin pantetheine 4'-(dihydrogen phosphate) [goid 31177] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]	FASN2A; ACP; SDAP; MGC65095	FASN2A; ACP; SDAP; MGC65095
Homo sapiens	Unigene	Hs.582788	ILMN_134969	HS.582788	Hs.582788		Hs.582788		13750350	BG461844			ILMN_1833300	0004010017	S	359	AAGGTGCTGGGGGACACACTACCCTGGGCTTCAAGTCCCAGATCCCCACT	6	+	52123775-52123783:52123785-52123793:52123795-52123799:52123801-52123820:52123852-52123858		RST44785 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_001954.4	ILMN_10004	DDR1	NM_001954.4	NM_001954.4		780	114520614	NM_001954.4	DDR1	NP_001945.3	ILMN_2290547	0007560338	I	13	TGGGCCCTGAGCGGGACTGCAGCCAGCCCCCTGGGGCGCCAGCTTTGGAG	6	+	30851873-30851922	6p21.33a	Homo sapiens discoidin domain receptor tyrosine kinase 1 (DDR1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8390675] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8302582] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 9659899] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17721511] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TRKE; EDDR1; CD167; NEP; PTK3A; PTK3; DDR; CAK; NTRK4; RTK6; MCK10	EDDR1; CD167; TRKE; NEP; PTK3A; PTK3; DDR; CAK; NTRK4; MCK10; RTK6
Homo sapiens	RefSeq	NM_145173.1	ILMN_18199	DIRAS1	NM_145173.2	NM_145173.2		148252	141802213	NM_145173.2	DIRAS1	NP_660156.1	ILMN_1775048	0006560280	S	3059	AGGGACACACCCTGATAGCACAATCTCCTTGGGGCCCTGCCCACCTCCAG	19	-	2665833-2665882	19p13.3g	Homo sapiens DIRAS family, GTP-binding RAS-like 1 (DIRAS1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	GBTS1; RIG; FLJ42681; Di-Ras1	GBTS1; RIG; FLJ42681; Di-Ras1
Homo sapiens	RefSeq	XM_001724790.1	ILMN_343258	LOC100130575	XM_001724790.1	XM_001724790.1		100130575	169168515	XM_001724790.1	LOC100130575	XP_001724842.1	ILMN_3262542	0006620110	M	1090	CAGAGGTAGGGTGTCTTTAATGAAGGGGCTGGGCATTAAGAGCACGGGGG				6p25.2b	PREDICTED: Homo sapiens hypothetical protein LOC100130575 (LOC100130575), mRNA.					
Homo sapiens	RefSeq	NM_145057.2	ILMN_21209	CDC42EP5	NM_145057.2	NM_145057.2		148170	30089965	NM_145057.2	CDC42EP5	NP_659494.2	ILMN_1774982	0003370730	S	821	CTTCCCGCCCGGCACCCCACTTCTGTATACATAAACGGCCAAGGTGTGTG	19	-	59668026-59668075	19q13.42a	Homo sapiens CDC42 effector protein (Rho GTPase binding) 5 (CDC42EP5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11035016] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]	A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 11035016] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [pmid 11035016] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia [goid 31274] [pmid 11035016] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with the GTP-bound form of the Rho protein [goid 17049] [pmid 11035016] [evidence IPI]	MGC21945; CEP5; Borg3; MGC71153	MGC21945; CEP5; Borg3; MGC71153
Homo sapiens	RefSeq	NM_194251.2	ILMN_12596	GPR151	NM_194251.2	NM_194251.2		134391	57977304	NM_194251.2	GPR151	NP_919227.2	ILMN_1811039	0003830427	S	1140	TCCCATCCTTCCTGACGTAGAGCAGTTTTGGCATGAGAGGGACACAGTCC	5	-	145894487-145894536	5q32d	Homo sapiens G protein-coupled receptor 151 (GPR151), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	GALR4; PGR7; GALRL; GPCR	PGR7; GPCR; GALR4; GALRL
Homo sapiens	RefSeq	NM_009590.2	ILMN_17893	AOC2	NM_009590.2	NM_009590.2		314	60498983	NM_009590.2	AOC2	NP_033720.2	ILMN_1799863	0000580736	I	1843	TCCACAGCCCCCTTGGCATACACATACCCCTGGAGAGTGACATGGAGAGG	17	+	38254848-38254897	17q21.31a	Homo sapiens amine oxidase, copper containing 2 (retina-specific) (AOC2), transcript variant 2, mRNA.		The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9119395] [evidence TAS]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the reaction: R-CH2-NH2 + H2O + O2 = R-CHO + NH3 + H2O2 [goid 8131] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9119395] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds [goid 48038] [evidence IEA]	DAO2; RAO	DAO2; RAO
Homo sapiens	RefSeq	NM_001005404.3	ILMN_19750	YPEL2	NM_001005404.3	NM_001005404.3		388403	56550087	NM_001005404.3	YPEL2	NP_001005404.1	ILMN_1677098	0001110465	S	4412	GTATGGAGCTGTTGCGGGTTTGCTCCTTTTTCTTGCTTTGCGTGCTCAGT	17	+	54833057-54833106	17q22d	Homo sapiens yippee-like 2 (Drosophila) (YPEL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			DKFZp761C2021; FKSG4	DKFZp761C2021; FKSG4
Homo sapiens	RefSeq	XM_001718815.1	ILMN_351360	LOC728692	XM_001718815.1	XM_001718815.1		728692	169208153	XM_001718815.1	LOC728692	XP_001718867.1	ILMN_3248332	0007320121	S	216	ACTACAAGAAAAACTTCGACTTGTAGAATCTGAAAAGTCTGAGATCCAGC	15	-	30570603-30570652	15q13.3c	PREDICTED: Homo sapiens hypothetical LOC728692 (LOC728692), mRNA.					
Homo sapiens	Unigene	Hs.127715	ILMN_76472	HS.127715	Hs.127715		Hs.127715		27825672	BX093283			ILMN_1883094	0002760154	S	14	CAGAACACGGAACATTCTGGGCACTGGGAAGGACAATTGCTTTTAGGCCT	13	+	72494381-72494430		BX093283 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998D104004 ; IMAGE:1579737, mRNA sequence					
Homo sapiens	RefSeq	NM_199184.1	ILMN_5240	C6ORF108	NM_199184.1	NM_199184.1		10591	40354200	NM_199184.1	C6orf108	NP_954653.1	ILMN_1722364	0002640520	I	480	CAAGGGGTAAGGGAGCTGTGAGGGTGTGGATGGGAGGCAGCTTCACCTTT	6	-	43301612-43301661	6p21.1d	Homo sapiens chromosome 6 open reading frame 108 (C6orf108), transcript variant 2, mRNA.				RCL; RP3-330M21.3; dJ330M21.3	RCL; RP3-330M21.3; dJ330M21.3
Homo sapiens	RefSeq	NM_199184.1	ILMN_5240	C6ORF108	NM_199184.1	NM_199184.1		10591	40354200	NM_199184.1	C6orf108	NP_954653.1	ILMN_2380588	0007210484	A	565	GGAGCAGCAGATGGCTCTCGGTTCCAGGTGTGGGACTATGAGGAGGGAGA	6	-	43301527-43301576	6p21.1d	Homo sapiens chromosome 6 open reading frame 108 (C6orf108), transcript variant 2, mRNA.				RCL; RP3-330M21.3; dJ330M21.3	RCL; RP3-330M21.3; dJ330M21.3
Homo sapiens	RefSeq	NM_030568.3	ILMN_13655	KHDC1	NM_030568.3	NM_030568.3		80759	117956388	NM_030568.3	KHDC1	NP_085045.3	ILMN_2163070	0003130735	S	817	GGCTCCCAGGATAAGTGGAACCGTGTGTCTTAGCGTTCCTCAGCCTTCCC	6	-	74008025-74008074	6q13c	Homo sapiens KH homology domain containing 1 (KHDC1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC10818; NDG1; bA257K9.4; C6orf148	MGC10818; bA257K9.4
Homo sapiens	RefSeq	NM_001142725.1	ILMN_372182	ERI2	NM_001142725.1	NM_001142725.1		112479	218505679	NM_001142725.1	ERI2	NP_001136197.1	ILMN_3197652	0005490291	A	667	CTCAGGACGAGAACATTCTGGGTTGGACGATTCTCGGAATACTGCCCTTC	16	-	20810643-20810673:20811279-20811297	16p12.2c	Homo sapiens ERI1 exoribonuclease family member 2 (ERI2), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_001142725.1	ILMN_372182	ERI2	NM_001142725.1	NM_001142725.1		112479	218505679	NM_001142725.1	ERI2	NP_001136197.1	ILMN_3234735	0004730026	I	3144	CTGTGAGTCCAGTAAGCCAAAGGACCAAACAAAATAGGTTCAGGGTTTCA	16	-	20807971-20808020	16p12.2c	Homo sapiens ERI1 exoribonuclease family member 2 (ERI2), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_022893.2	ILMN_178467	BCL11A	NM_022893.2	NM_022893.2		53335	20336304	NM_022893.2	BCL11A	NP_075044.2	ILMN_2255133	0003170440	I	5872	GGCAGTTGTCTGCATTAACCTGTTCATACACCCATTTTGTCCCTTTATTG	2	-	60537857-60537906	2p16.1a	Homo sapiens B-cell CLL/lymphoma 11A (zinc finger protein) (BCL11A), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BCL11A-L; CTIP1; FLJ10173; EVI9; BCL11A-XL; BCL11A-S; FLJ34997; KIAA1809	BCL11A-L; CTIP1; FLJ10173; BCL11A-XL; BCL11A-S; FLJ34997; KIAA1809; EVI9
Homo sapiens	RefSeq	NM_001613.1	ILMN_6588	ACTA2	NM_001613.1	NM_001613.1		59	4501882	NM_001613.1	ACTA2	NP_001604.1	ILMN_1671703	0006480059	S	1184	CACTTTCCTGCTCCTCTCTGTCTCTAGCACACAACTGTGAATGTCCTGTG	10	-	90684907-90684956	10q23.31b	Homo sapiens actin, alpha 2, smooth muscle, aorta (ACTA2), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	ACTSA	ACTSA
Homo sapiens	Unigene	Hs.571967	ILMN_124148	HS.571967	Hs.571967		Hs.571967		51491268	CR749843			ILMN_1895745	0001230338	S	2755	CCTGAGTAGCTCTGGAATAAGAGCCAGAGATCCCCATAAGGCTGCCCTGg	16	-	9759251-9759300		Homo sapiens mRNA; cDNA DKFZp686F1745 (from clone DKFZp686F1745)					
Homo sapiens	RefSeq	NM_024837.2	ILMN_20882	ATP8B4	NM_024837.2	NM_024837.2		79895	50083276	NM_024837.2	ATP8B4	NP_079113.2	ILMN_1783956	0001820270	S	5517	CTGCCTATGGACGTTGTCTTTCCCTTACATGCCTGCCTACACTTAACCAG	15	-	50150545-50150594	15q21.2a	Homo sapiens ATPase, class I, type 8B, member 4 (ATP8B4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ATPIM	ATPIM
Homo sapiens	RefSeq	XR_040114.1	ILMN_342890	LOC285943	XR_040114.1	XR_040114.1		285943	169170215	XR_040114.1	LOC285943		ILMN_3208576	0000460768	A	1050	ATGATGAGCCCTGATGAAAGAAGGAAGAAGACCCGCTGTCTGCGAAGGCC	7	+	27212746-27212795	7p15.2a	PREDICTED: Homo sapiens hypothetical protein LOC285943 (LOC285943), miscRNA.					
Homo sapiens	RefSeq	NM_145203.2	ILMN_6074	CSNK1A1L	NM_145203.2	NM_145203.2		122011	34222183	NM_145203.2	CSNK1A1L	NP_660204.1	ILMN_2088785	0003520224	S	1965	CAGTTTTGAGAATAGGAAAGATTCCGCCTGCTTACCTGTGAAGACATAAG	13	-	36575789-36575838	13q13.3b	Homo sapiens casein kinase 1, alpha 1-like (CSNK1A1L), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC33182; RP11-532O21.2	MGC33182; RP11-532O21.2
Homo sapiens	RefSeq	XM_001726300.1	ILMN_346972	LOC339192	XM_001726300.1	XM_001726300.1		339192	169211030	XM_001726300.1	LOC339192	XP_001726352.1	ILMN_3289508	0001230026	M	2119	CTGTGAGAGGAAAAGAGAAGGGTAGGAGCGTGCCCTGCAGCTGGAAACCC	17	-	40652587-40652636	17q21.31d	PREDICTED: Homo sapiens hypothetical protein LOC339192 (LOC339192), mRNA.					
Homo sapiens	RefSeq	NM_153463.1	ILMN_14722	IL17RC	NM_153463.1	NM_153463.1		84818	24430200	NM_153463.1	IL17RC	NP_703193.1	ILMN_1690458	0003830703	I	353	CAAATTCTGGGCTTGGAACAGCTTCAGCTCCCACCCGCTCCTCCACACAC	3	+	9934555-9934604	3p25.3c	Homo sapiens interleukin 17 receptor C (IL17RC), transcript variant 5, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IL17-RL; MGC10763	IL17-RL; MGC10763
Homo sapiens	RefSeq	NM_032300.2	ILMN_2569	TCHP	NM_032300.2	NM_032300.2		84260	40254984	NM_032300.2	TCHP	NP_115676.1	ILMN_1665058	0000730687	S	2283	CATGGACGCATTCCAGAAAAGTGGCAAGAGATGAGTCTTTCCTCCTCCAG	12	+	108839383-108839432	12q24.11b	Homo sapiens trichoplein, keratin filament binding (TCHP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [pmid 15731013] [evidence IDA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [pmid 15731013] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15731013] [evidence IPI]	MGC10854	MGC10854
Homo sapiens	RefSeq	NM_001039613.1	ILMN_45528	IAH1	NM_001039613.1	NM_001039613.1		285148	88853864	NM_001039613.1	IAH1	NP_001034702.1	ILMN_2217329	0001300743	S	552	GACGTACTTGACCTGTGGACCCTGATGCAGGACAGCCAGGACTTCTCATC	2	+	9542092-9542130:9545727-9545737	2p25.1d	Homo sapiens isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) (IAH1), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	MGC102860	MGC102860
Homo sapiens	RefSeq	XM_945726.1	ILMN_42494	LOC642597	XM_931389.2	XM_931389.2		642597	113427671	XM_931389.2	LOC642597	XP_936482.1	ILMN_1662143	0004180044	I	166	TCTCTCTTAATCTGGGGGCGTAGCGGCTGGAAGAAATCATGGTGTTCGCT	18	-	5187040-5187052:5187053-5187089	18p11.31c	PREDICTED: Homo sapiens hypothetical LOC642597, transcript variant 2 (LOC642597), mRNA.					
Homo sapiens	RefSeq	XM_943478.1	ILMN_32427	LOC338588	XM_943478.1	XM_943478.1		338588	89031764	XM_943478.1	LOC338588	XP_948571.1	ILMN_1674648	0006270561	A	1460	GGCCCTATTTTCAGCCACCCCTCTCCATGCCTCTTGTCTGTCTCTAGCTG				10p15.1d	PREDICTED: Homo sapiens hypothetical protein LOC338588 (LOC338588), mRNA.					
Homo sapiens	RefSeq	NM_080474.1	ILMN_2571	SERPINB12	NM_080474.1	NM_080474.1		89777	17998550	NM_080474.1	SERPINB12	NP_536722.1	ILMN_2234517	0006760301	S	765	CGTGCTGCTGCCATCTCACTCTAAAGATAACCTGAAGGGTCTGGAAGAGC	18	+	59383777-59383825:59384820-59384820	18q21.33b	Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 12 (SERPINB12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11604408] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [pmid 11604408] [evidence NAS]	Interacting selectively with any enzyme [goid 19899] [pmid 11604408] [evidence NAS]; Stops, prevents or reduces the activity of the serine endopeptidase trypsin [goid 30304] [pmid 11604408] [evidence IMP]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	MGC119247; YUKOPIN; MGC119248	MGC119247; YUKOPIN; MGC119248
Homo sapiens	RefSeq	NR_024591.1	ILMN_370841	POM121L1P	NR_024591.1	NR_024591.1		25812	218083753	NR_024591.1	POM121L1P		ILMN_3241154	0005960037	S	3945	AGCCCTCCCAGAGTGCTATGCGAGTGGGGGTGGGGCGTGGTGTTTAGACA	22	-	22974205-22974254	22q11.22b	Homo sapiens POM121 membrane glycoprotein-like 1 (rat) pseudogene (POM121L1P), non-coding RNA.					
Homo sapiens	RefSeq	NM_024953.2	ILMN_21933	C12ORF30	NM_024953.2	NM_024953.2		80018	38679913	NM_024953.2	C12orf30	NP_079229.2	ILMN_1788810	0002360601	S	5179	GCACCCTCTCCCAGCAATCGTATGCCATTGGTATTTGAAGAGAATTCCCA	12	-	112465045-112465094	12q24.13a	Homo sapiens chromosome 12 open reading frame 30 (C12orf30), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DKFZp667K2112; FLJ13089	DKFZp667K2112; FLJ13089
Homo sapiens	RefSeq	NM_024953.2	ILMN_21933	C12ORF30	NM_024953.2	NM_024953.2		80018	38679913	NM_024953.2	C12orf30	NP_079229.2	ILMN_2077733	0007510600	S	5459	GTAGTGTTCTCCACATAATGGAAAATGTACAAATGCCTAGTTGTGTTGCC	12	-	112464765-112464814	12q24.13a	Homo sapiens chromosome 12 open reading frame 30 (C12orf30), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DKFZp667K2112; FLJ13089	DKFZp667K2112; FLJ13089
Homo sapiens	RefSeq	NM_001003936.1	ILMN_2948	TXNDC8	NM_001003936.1	NM_001003936.1		255220	51510890	NM_001003936.1	TXNDC8	NP_001003936.1	ILMN_1707461	0000730189	S	213	CTCCGGAGCTGGCTGAAACTTGTCACATCAAAACAATACCCACATTTCAG	9	-	112128280-112128329	9q31.3b	Homo sapiens thioredoxin domain containing 8 (spermatozoa) (TXNDC8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		bA427L11.2; SPTRX-3; TRX6	bA427L11.2; SPTRX-3; TRX6
Homo sapiens	Unigene	Hs.577923	ILMN_130104	HS.577923	Hs.577923		Hs.577923		83099949	DB375714			ILMN_1895670	0003140446	S	143	GTGGTGGGTAAGATAGAGCGGTCAGGGTAGGCTTCAATGAGAAGGTGGCA					DB375714 PLACE1 Homo sapiens cDNA clone PLACE1005210 3, mRNA sequence					
Homo sapiens	RefSeq	NM_012211.3	ILMN_26949	ITGA11	NM_001004439.1	NM_001004439.1		22801	52485852	NM_001004439.1	ITGA11	NP_001004439.1	ILMN_1651343	0001770561	A	4833	TGATAATGCCCCAAGGACAAGGGGCGTGCCTGGCGCCCAGTGGAGTAATT	15	-	68594168-68594217	15q23a	Homo sapiens integrin, alpha 11 (ITGA11), mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 10486209] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The orderly movement of cells from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate [goid 6929] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10486209] [evidence TAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 10464311] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 10464311] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [pmid 10464311] [evidence TAS]	HsT18964	HsT18964
Homo sapiens	RefSeq	NM_025002.1	ILMN_4566	C6ORF208	NM_025002.1	NM_025002.1		80069	13376514	NM_025002.1	C6orf208	NP_079278.1	ILMN_1738223	0001710376	S	1868	CCTCTGTGTGCGTTGGTTTGCTGTGTTCTTGCTACTCGCCCTTGGATAAG	6	+	169944444-169944493	6q27f	Homo sapiens chromosome 6 open reading frame 208 (C6orf208), mRNA.				FLJ13162; dJ182D15.1; RP1-266L20.3; MGC120218	FLJ13162; dJ182D15.1; RP1-266L20.3; MGC120218
Homo sapiens	RefSeq	NM_003200.1	ILMN_173421	TCF3	NM_003200.1	NM_003200.1		6929	27777635	NM_003200.1	TCF3	NP_003191.1	ILMN_1664434	0004900348	S	4093	TCTGGGTGGCAGTGGCCCCATAGCCTCTGGAACTGTGCGTTCTGCATAGA	19	-	1560558-1560607	19p13.3h	Homo sapiens transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47) (TCF3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12435739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2493990] [evidence NAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 15044608] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 2503252] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12435739] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 12435739] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Progression through G1 phase, one of two 'gap' phases in the mitotic cell cycle; G1 is the interval between the completion of mitosis and the beginning of DNA synthesis [goid 80] [pmid 11509675] [evidence IDA]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [pmid 15030778] [evidence IDA]; The process whereby a lymphoid progenitor cell becomes committed to become any type of B cell [goid 2326] [pmid 12435739] [evidence NAS]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [pmid 11509675] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [pmid 11509675] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11509675] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 2105528] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 12435739] [evidence IDA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11509675] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2105528] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2493990] [evidence NAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12435739] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12435739] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10903890] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9409784] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10958665] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12435739] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9409784] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8759016] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 2503252] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15044608] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8759016] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10958665] [evidence IDA]; Interacting selectively with any of the basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transciptional networks of many developmental pathways [goid 43425] [pmid 10545951] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 15044608] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 2105528] [evidence NAS]	MGC129648; MGC129647; ITF1; E2A	MGC129648; MGC129647; ITF1; E2A
Homo sapiens	RefSeq	NM_198829.1	ILMN_15217	RAC1	NM_198829.1	NM_198829.1		5879	38505164	NM_198829.1	RAC1	NP_942126.1	ILMN_1761938	0007650187	I	280	CAAGAATCTCAGTGTAACCCGAGCAAAATCGCGCGTCTCAGCGTTGCTTG	7	+	6382018-6382067	7p22.1b	Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1), transcript variant Rac1c, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7744773] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10648409] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14737186] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9572733] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9572733] [evidence TAS]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9572733] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9572733] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions involving hydrogen peroxide [goid 10310] [pmid 16636067] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [pmid 9312003] [evidence IMP]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [pmid 9312003] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [pmid 9312003] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of Rho protein signal transduction [goid 35025] [pmid 9312003] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport [goid 48261] [pmid 9312003] [evidence TAS]; Any process by which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane [goid 51668] [pmid 16636067] [evidence IMP]; Any process that modulates the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 60263] [pmid 16636067] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9312003] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 16636067] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [pmid 10954424] [evidence IPI]	MGC111543; MIG5; TC-25; p21-Rac1	MGC111543; MIG5; TC-25; p21-Rac1
Homo sapiens	Unigene	Hs.348514	ILMN_86926	HS.348514	Hs.348514		Hs.348514		15680102	BC014384			ILMN_1832208	0001980088	S	1109	CGATAGTAAATTATCCATGCTGGTACCTGTGAAAGTAAGCCCTGGGATCC	4	+	41657021-41657070		Homo sapiens, clone IMAGE:4052238, mRNA, partial cds					
Homo sapiens	RefSeq	NM_014637.2	ILMN_182617	MTFR1	NM_014637.2	NM_014637.2		9650	33589832	NM_014637.2	MTFR1	NP_055452.2	ILMN_1774028	0006770348	S	2290	GTTGTACTTCCTGGCTGGGAGTATTAGGAGATGGGAGTAGAGATTCACTT	8	+	66784995-66785044	8q13.1a	Homo sapiens mitochondrial fission regulator 1 (MTFR1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10942595] [evidence IDA]			KIAA0009; CHPPR	KIAA0009; CHPPR
Homo sapiens	RefSeq	XR_037795.1	ILMN_350315	LOC100129424	XR_037795.1	XR_037795.1		100129424	169171864	XR_037795.1	LOC100129424		ILMN_3270683	0002320131	M	121	ATCCCACTGTATAGCAGTTTCAGGATGATGCTGCCTCTCTAACTTGGAGT				7q22.1f	PREDICTED: Homo sapiens misc_RNA (LOC100129424), miscRNA.					
Homo sapiens	RefSeq	XR_037795.1	ILMN_350315	LOC100129424	XR_037795.1	XR_037795.1		100129424	169171864	XR_037795.1	LOC100129424		ILMN_3194217	0000150521	A	876	CTCATGGAACACATCCACAAGCTGAAGGCAGACAAGGCCCGCAGAAGCTC				7q22.1f	PREDICTED: Homo sapiens misc_RNA (LOC100129424), miscRNA.					
Homo sapiens	RefSeq	NM_001014279.1	ILMN_17443	C5ORF39	NM_001014279.1	NM_001014279.1		389289	62122949	NM_001014279.1	C5orf39	NP_001014301.1	ILMN_2098616	0007330523	S	770	GGAGCTAAGCAGCCTTAGATAGCAGCAGAAGGCTTTTTGGATTCTCCTCC	5	-	43075279-43075323:43075324-43075328	5p12c	Homo sapiens chromosome 5 open reading frame 39 (C5orf39), mRNA.				AX2R; AXIIR	AX2R; AXIIR
Homo sapiens	RefSeq	NM_181645.2	ILMN_29506	CCDC67	NM_181645.3	NM_181645.3		159989	116812627	NM_181645.3	CCDC67	NP_857596.2	ILMN_1663062	0005700379	S	874	CCAAAGACAGTGCCAGGCCATGGAAGCAGGTCTCTCAGAGGTAAAAAGTG	11	+	92744079-92744094:92758212-92758245	11q21a	Homo sapiens coiled-coil domain containing 67 (CCDC67), mRNA.				FLJ25393	FLJ25393
Homo sapiens	RefSeq	NM_013367.2	ILMN_16297	ANAPC4	NM_013367.2	NM_013367.2		29945	41327748	NM_013367.2	ANAPC4	NP_037499.2	ILMN_1802973	0006450021	S	2461	GAGTCAGAGGCAGAGAACCAACAAGCTGGTGCTGCCGCTTTAGCTCCAGA	4	+	25029007-25029056	4p15.2c	Homo sapiens anaphase promoting complex subunit 4 (ANAPC4), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [pmid 9469815] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]	Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 9469815] [evidence TAS]; Progression through anaphase, the stage of mitosis during which the two sets of chromosomes separate and move away from each other [goid 90] [pmid 9469815] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9469815] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 6180011] [evidence TAS]	APC4	APC4
Homo sapiens	RefSeq	NM_005126.2	ILMN_167401	NR1D2	XM_001130839.1	XM_001130839.1		9975	113414979	XM_001130839.1	NR1D2	XP_001130839.1	ILMN_1698668	0002640707	A	2297	CTTGCGGAAAATGAGAATTGATGGTGTCCCCAATGCCCCACCTCACAGAG				3p24.2b	PREDICTED: Homo sapiens nuclear receptor subfamily 1, group D, member 2 (NR1D2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7997240] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7997240] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		HZF2; EAR-1r; Hs.37288; RVR; BD73
Homo sapiens	RefSeq	NR_002219.1	ILMN_28283	EPR1	NR_002219.1	NR_002219.1		8475	59276014	NR_002219.1	EPR1		ILMN_2148012	0002760465	S	855	GTTGGTTTCCTTTGCCAATTTTGTTCTTGGCTCTTTCTCTGTCCAGTTTC	17	-	76212828-76212863:76219546-76219559	17q25.3b	Homo sapiens effector cell peptidase receptor 1 (non-protein coding) (EPR1), non-coding RNA.				BIRC5OS; EPR-1	BIRC5OS; EPR-1
Homo sapiens	RefSeq	XM_001716730.1	ILMN_346733	LOC730045	XM_001716730.1	XM_001716730.1		730045	169212966	XM_001716730.1	LOC730045	XP_001716782.1	ILMN_3227005	0002570097	A	35	ACCCTGAGATGGGGCTGGTCAGACCTGACTCTAGAGAAGTTCAAAGAAGG				18q12.1g	PREDICTED: Homo sapiens hypothetical LOC730045 (LOC730045), mRNA.					
Homo sapiens	RefSeq	XM_001726681.1	ILMN_337972	LOC100132364	XM_001726681.1	XM_001726681.1		100132364	169209997	XM_001726681.1	LOC100132364	XP_001726733.1	ILMN_3279282	0001190538	M	707	TGGGGGTTGATGGCGTATTTGCCCCCTTTGGGAGTGGGAAGCGAGTACTG	16	+	68333959-68334008	16q22.1e	PREDICTED: Homo sapiens hypothetical protein LOC100132364, transcript variant 1 (LOC100132364), mRNA.					
Homo sapiens	RefSeq	NM_182776.1	ILMN_1133	MCM7	NM_182776.1	NM_182776.1		4176	33469921	NM_182776.1	MCM7	NP_877577.1	ILMN_1800654	0002360528	I	916	GTGAGTGGTCTCTGTCGGGAAAGATGTAGGGATTGGTTCTCCAGGATCTT	7	-	99696851-99696900	7q22.1c	Homo sapiens minichromosome maintenance complex component 7 (MCM7), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 8798650] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10846177] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A hexameric protein complex required for the initiation and regulation of DNA replication [goid 42555] [pmid 15538388] [evidence IMP]	The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8798650] [evidence TAS]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 15538388] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [pmid 15538388] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 15538388] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15538388] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16438930] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10518787] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MCM2; CDC47; P1.1-MCM3; P1CDC47; CDABP0042; P85MCM; PNAS-146	MCM2; CDC47; P1.1-MCM3; P1CDC47; CDABP0042; P85MCM; PNAS-146
Homo sapiens	RefSeq	NM_182776.1	ILMN_1133	MCM7	NM_182776.1	NM_182776.1		4176	33469921	NM_182776.1	MCM7	NP_877577.1	ILMN_1663195	0001470195	A	2707	CTGGCAGGTCAATGCTTCCCGGACACGGATCACTTTTGTCTGATTCCAGC	7	-	99690547-99690554:99690555-99690596	7q22.1c	Homo sapiens minichromosome maintenance complex component 7 (MCM7), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 8798650] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10846177] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A hexameric protein complex required for the initiation and regulation of DNA replication [goid 42555] [pmid 15538388] [evidence IMP]	The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8798650] [evidence TAS]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 15538388] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [pmid 15538388] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 15538388] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15538388] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16438930] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10518787] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MCM2; CDC47; P1.1-MCM3; P1CDC47; CDABP0042; P85MCM; PNAS-146	MCM2; CDC47; P1.1-MCM3; P1CDC47; CDABP0042; P85MCM; PNAS-146
Homo sapiens	RefSeq	NM_014222.2	ILMN_23439	NDUFA8	NM_014222.2	NM_014222.2		4702	33519464	NM_014222.2	NDUFA8	NP_055037.1	ILMN_1759729	0004560367	S	663	GATGGGTCCGTGGCCCACACTCGGTCATGTGCTCAGACAACGACTGATGA	9	-	124906468-124906517	9q33.2b	Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa (NDUFA8), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9860297] [evidence TAS]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	CI-19KD; PGIV; MGC793; CI-PGIV	CI-19KD; PGIV; MGC793; CI-PGIV
Homo sapiens	RefSeq	NM_016115.3	ILMN_25973	ASB3	NM_016115.3	NM_016115.3		51130	22208952	NM_016115.3	ASB3	NP_057199.1	ILMN_1699606	0005720458	I	152	CTTACGCGGACACGTGCTCTACAGTTGGACTTGCTGCCAGGGAAGGCAAT	2	-	53992643-53992692	2p16.2a	Homo sapiens ankyrin repeat and SOCS box-containing 3 (ASB3), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		MGC996; FLJ10123; ASB-3; MGC132002; FLJ10421; MGC12531	MGC996; FLJ10123; ASB-3; MGC132002; FLJ10421; MGC12531
Homo sapiens	RefSeq	XM_059482.7	ILMN_172231	SNED1	NM_001080437.1	NM_001080437.1		25992	122937282	NM_001080437.1	SNED1	NP_001073906.1	ILMN_1652066	0000580661	I	164	CGCTCTCGGTGCCCTTCCCGTTCTTCGGTGCCGAGCACTCCGGACTCTAC	2	+	241587091-241587140	2q37.3f	Homo sapiens sushi, nidogen and EGF-like domains 1 (SNED1), mRNA.		The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp586B2420; SST3; FLJ00133; Snep	
Homo sapiens	RefSeq	NM_004408.2	ILMN_2428	DNM1	NM_001005336.1	NM_001005336.1		1759	56549116	NM_001005336.1	DNM1	NP_001005336.1	ILMN_1805200	0002320546	A	3028	CCAACTACCAGAGAACGCTGTCCCCCGACATCCCACTCCAAAGTGTGCCA	9	+	130057123-130057172	9q34.11b	Homo sapiens dynamin 1 (DNM1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 8101525] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10944110] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DNM	DNM
Homo sapiens	RefSeq	NM_001130009.1	ILMN_364079	GEN1	NM_001130009.1	NM_001130009.1		348654	194018534	NM_001130009.1	GEN1	NP_001123481.1	ILMN_3249840	0007000195	A	6181	CCACGAAAGTGGTCCTCGGTGCCAGAAAGGTTGGGGACTGCTGATATACC	2	+	17966446-17966495	2p24.2b	Homo sapiens Gen homolog 1, endonuclease (Drosophila) (GEN1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	XR_038268.1	ILMN_345099	LOC100129067	XR_038268.1	XR_038268.1		100129067	169202185	XR_038268.1	LOC100129067		ILMN_3188174	0000450433	A	837	CTGCTTCCGGATGACTGCTATTCAAGATCTCTGACAGTGGAGGAAGTCTC	11	+	61855813-61855862	11q12.3a	PREDICTED: Homo sapiens misc_RNA (LOC100129067), miscRNA.					
Homo sapiens	RefSeq	NM_002842.2	ILMN_8628	PTPRH	NM_002842.2	NM_002842.2		5794	67190343	NM_002842.2	PTPRH	NP_002833.2	ILMN_1741465	0007400768	S	3529	TGGTTTCCCCAGGAGAGAGTGGTCTGGTGGGCTTCAGATGAGTCCTATGG	19	-	60384744-60384793	19q13.42b	Homo sapiens protein tyrosine phosphatase, receptor type, H (PTPRH), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ39938; SAP-1; MGC133058; MGC133059	FLJ39938; SAP-1; MGC133058; MGC133059
Homo sapiens	Unigene	Hs.538933	ILMN_104209	HS.538933	Hs.538933		Hs.538933		55947430	AV716776			ILMN_1880086	0005290687	S	346	GTCATCAGCTTCTTGGGTATCTACAAGTGGTTTCAGCAGTAGCAACAACC	11	+	58652161-58652210		AV716776 DCB Homo sapiens cDNA clone DCBBWE03 5, mRNA sequence					
Homo sapiens	RefSeq	NM_019851.1	ILMN_10954	FGF20	NM_019851.1	NM_019851.1		26281	9789946	NM_019851.1	FGF20	NP_062825.1	ILMN_1788232	0000060446	S	428	GAATTCATCAGTGTGGCAGTGGGACTGGTCAGTATTAGAGGTGTGGACAG	8	-	16897580-16897629	8p22b	Homo sapiens fibroblast growth factor 20 (FGF20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1697263] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9139660] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10913340] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10913340] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10913340] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10913340] [evidence TAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 15592430] [evidence IMP]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Homo sapiens	RefSeq	NM_020964.1	ILMN_19319	KIAA1632	NM_020964.2	NM_020964.2		57724	93204864	NM_020964.2	KIAA1632	NP_066015.2	ILMN_1762608	0003780709	S	7441	GCTCTTGGTTCAGAGCAGGCAGAACCTCGTGGCTGAGGAGAGACTCAGCT	18	-	43437869-43437918	18q12.3f-q21.1a	Homo sapiens KIAA1632 (KIAA1632), mRNA.				HEEW1; DKFZp667P2311	HEEW1; DKFZp667P2311
Homo sapiens	RefSeq	Hs.514843	ILMN_19319	KIAA1632	NM_020964.2	NM_020964.2		57724	93204864	NM_020964.2	KIAA1632	NP_066015.2	ILMN_1838885	0004810079	S	8493	GCCTGTCTGAATCAGGATGGCAAGCTGGCAGTCTGGGAGGAGCATGTTTT	18	-	43431729-43431778	18q12.3f-q21.1a	Homo sapiens KIAA1632 (KIAA1632), mRNA.				HEEW1; DKFZp667P2311	
Homo sapiens	RefSeq	XM_929976.1	ILMN_19319	KIAA1632	NM_020964.2	NM_020964.2		57724	93204864	NM_020964.2	KIAA1632	NP_066015.2	ILMN_1652188	0005870176	S	221	AAAACCTCCAGAGAGCAGGAAATCCCTTCTCTAGCCTGTGAATTCAAAGG	18	-	43535197-43535246	18q12.3f-q21.1a	Homo sapiens KIAA1632 (KIAA1632), mRNA.				HEEW1; DKFZp667P2311	
Homo sapiens	RefSeq	NM_032445.1	ILMN_27227	MEGF11	NM_032445.1	NM_032445.1		84465	14192940	NM_032445.1	MEGF11	NP_115821.1	ILMN_1787179	0003170180	S	5324	GGCAGAGGGTGTGATTATGGTGACAATAGCTGCCTTCCCCTATCGAACAG	15	-	63975021-63975070	15q22.31c	Homo sapiens multiple EGF-like-domains 11 (MEGF11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]			DKFZp434L121; KIAA1781	DKFZp434L121; KIAA1781
Homo sapiens	RefSeq	NM_178434.1	ILMN_22508	LCE3C	NM_178434.1	NM_178434.1		353144	30410036	NM_178434.1	LCE3C	NP_848521.1	ILMN_1728632	0002480632	S	163	AGCCACCACAGGCACTTCAGGTCCCATCAATGCCGGCGCCAGAGATCCAA	1	+	150839994-150840043	1q21.3b	Homo sapiens late cornified envelope 3C (LCE3C), mRNA.		The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		LEP15; SPRL3A	LEP15; SPRL3A
Homo sapiens	Unigene	Hs.559654	ILMN_113771	HS.559654	Hs.559654		Hs.559654		3848219	AI251690			ILMN_1868407	0004070152	S	186	GGAGGACACAGTCAAACCATAGCACCAACTATCTGCCTTTTCCACTGGGG					qv45e03.x1 NCI_CGAP_Ov32 Homo sapiens cDNA clone IMAGE:1984540 3, mRNA sequence					
Homo sapiens	RefSeq	XM_934160.1	ILMN_33339	LOC647006	XM_934160.1	XM_934160.1		647006	89040245	XM_934160.1	LOC647006	XP_939253.1	ILMN_1724840	0004150315	S	219	AGTTGGTGAGGGACACAAGTTGGACCAGAAGCGCGAGCGCGGAGAGTCCT	16	-	28286755-28286804		PREDICTED: Homo sapiens hypothetical protein LOC647006 (LOC647006), mRNA.					
Homo sapiens	RefSeq	XM_942542.1	ILMN_31068	LOC652844	XM_942542.1	XM_942542.1		652844	89064970	XM_942542.1	LOC652844	XP_947635.1	ILMN_1791635	0001450187	S	320	GAAGCCATCCCTGGAATCCCTCACTGATTCAGCTGGAGTATGGAGGAGCT					PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein isoform 2 (LOC652844), mRNA.					
Homo sapiens	RefSeq	NM_032725.2	ILMN_19778	BUD13	NM_032725.2	NM_032725.2		84811	39725657	NM_032725.2	BUD13	NP_116114.1	ILMN_1749210	0000050487	S	1910	GGGCTGTGGTAGTGGGCATAGGCAGCGAGATATCCAGTGGTAACAGTTGT	11	-	116124332-116124381	11q23.3b	Homo sapiens BUD13 homolog (S. cerevisiae) (BUD13), mRNA.				MGC13125	MGC13125
Homo sapiens	RefSeq	XM_001720236.1	ILMN_344602	LOC100133419	XM_001720236.1	XM_001720236.1		100133419	169217858	XM_001720236.1	LOC100133419	XP_001720288.1	ILMN_3243320	0002060427	S	1	CCCTTTTTGGGCGTGGAAAGATGGCGGTAAAAGCCACAATGCGCAGGCGT					PREDICTED: Homo sapiens hypothetical protein LOC100133419 (LOC100133419), mRNA.					
Homo sapiens	RefSeq	NM_017915.1	ILMN_42497	C12ORF48	NM_017915.2	NM_017915.2		55010	90819238	NM_017915.2	C12orf48	NP_060385.2	ILMN_1727055	0000990136	S	2994	ACACTTTCAGATAAGAGGTGTTTGCTGGGATGGAAGAACTACCTGGCATG	12	+	101115233-101115282	12q23.2a	Homo sapiens chromosome 12 open reading frame 48 (C12orf48), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ20641	FLJ20641
Homo sapiens	RefSeq	NM_002674.2	ILMN_42497	C12ORF48	NM_017915.2	NM_017915.2		55010	90819238	NM_017915.2	C12orf48	NP_060385.2	ILMN_1654429	0001400743	S	2349	GAGTCTACCGACCTTGTTGGCAAGTCTGATACCTGTTGGTCCACATCATC	12	+	101114588-101114637	12q23.2a	Homo sapiens chromosome 12 open reading frame 48 (C12orf48), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ20641	MCH
Homo sapiens	RefSeq	XM_938415.1	ILMN_30592	LOC649340	XM_938415.1	XM_938415.1		649340	89035152	XM_938415.1	LOC649340	XP_943508.1	ILMN_1791766	0002070433	S	267	GAAGGTAGCGGGAAACACCGTCTCCACCAAGCCTCTCTACAGACTTTTTA					PREDICTED: Homo sapiens hypothetical protein LOC649340 (LOC649340), mRNA.					
Homo sapiens	RefSeq	NM_014969.3	ILMN_163009	WDR47	NM_014969.4	NM_014969.4		22911	141802599	NM_014969.4	WDR47	NP_055784.2	ILMN_1741869	0007040148	S	3188	TTCCGCAGTGCTTTCAGTCTTCCATGTGAGCTCGTGCTGCTGTGACCTGC	1	-	109315361-109315410	1p13.3b	Homo sapiens WD repeat domain 47 (WDR47), mRNA.				KIAA0893; FLJ90135	KIAA0893
Homo sapiens	RefSeq	XR_038180.1	ILMN_340360	LOC100131464	XR_038180.1	XR_038180.1		100131464	169217727	XR_038180.1	LOC100131464		ILMN_3239930	0000010088	S	1590	CTCCTTCTCACAGTGGCCTGTTGATGCCCAACTCATGCCTCTGGCACCCT					PREDICTED: Homo sapiens misc_RNA (LOC100131464), miscRNA.					
Homo sapiens	RefSeq	NM_006385.2	ILMN_8413	ZNF211	NM_006385.2	NM_006385.2		10520	38569444	NM_006385.2	ZNF211	NP_006376.2	ILMN_1811195	0000430368	A	2215	ATAGTCTGAGTCTTCCTCTCTGACAAGTTAGGGCATGGACTTGACCCAGC	19	+	62845711-62845760	19q13.43b	Homo sapiens zinc finger protein 211 (ZNF211), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C2H2-25; ZNF-25; ZNFC25; MGC131841; CH2H2-25	C2H2-25; ZNF-25; ZNFC25; MGC131841; CH2H2-25
Homo sapiens	RefSeq	XM_944070.1	ILMN_46659	LOC650151	XM_944070.1	XM_944070.1		650151	89041088	XM_944070.1	LOC650151	XP_949163.1	ILMN_1699413	0006270121	S	318	CTCTCTCAAAGGCAGTCCACCCCTGCCCGACACCCCCTGTTACAGTGATT					PREDICTED: Homo sapiens hypothetical LOC650151 (LOC650151), mRNA.					
Homo sapiens	RefSeq	XM_937214.1	ILMN_33275	LOC648169	XM_937214.1	XM_937214.1		648169	89042246	XM_937214.1	LOC648169	XP_942307.1	ILMN_1727241	0003610551	S	1	ATGAAGACTTATGGCTTTGCACGGAAGCCAGGTGGGGCCCAGGCCTGGGT					PREDICTED: Homo sapiens hypothetical protein LOC648169 (LOC648169), mRNA.					
Homo sapiens	RefSeq	XM_001713933.1	ILMN_349034	PRAMEF13	XM_001713933.1	XM_001713933.1		400736	169161012	XM_001713933.1	PRAMEF13	XP_001713985.1	ILMN_3228189	0006560195	A	1625	TGAGGTGACATCAATGAGAACTTCAGGGACCCGTGTCCTACAGAGTCGGA				1p36.21d	PREDICTED: Homo sapiens PRAME family member 13 (PRAMEF13), mRNA.					
Homo sapiens	RefSeq	NM_001004476.1	ILMN_23488	OR10K2	NM_001004476.1	NM_001004476.1		391107	52317175	NM_001004476.1	OR10K2	NP_001004476.1	ILMN_1708982	0002120593	S	719	CCTGTGTATCTCACCTCATTATTGTCACTGTCCACTATGGCTGTGCCTCC	1	-	158389888-158389937	1q23.1f	Homo sapiens olfactory receptor, family 10, subfamily K, member 2 (OR10K2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-4	OR1-4
Homo sapiens	RefSeq	NM_001040456.1	ILMN_168345	RHBDD2	NM_001040456.1	NM_001040456.1		57414	94818789	NM_001040456.1	RHBDD2	NP_001035546.1	ILMN_2406410	0000510373	A	1519	CTGTGGCTGTGCCGTGCTCGTGGTTTCAGTGTCCGTGTGTCCATGTGTCT	7	+	75355943-75355992	7q11.23e	Homo sapiens rhomboid domain containing 2 (RHBDD2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			NPD007; RHBDL7	NPD007; RHBDL7
Homo sapiens	RefSeq	NM_020684.2	ILMN_168345	RHBDD2	NM_001040456.1	NM_001040456.1		57414	94818789	NM_001040456.1	RHBDD2	NP_001035546.1	ILMN_1809437	0006650746	S	1533	TGCTCGTGGTTTCAGTGTCCGTGTGTCCATGTGTCTGCCCTTCAGGAGCT	7	+	75355957-75356006	7q11.23e	Homo sapiens rhomboid domain containing 2 (RHBDD2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			NPD007; RHBDL7	NPD007; RHBDL7
Homo sapiens	RefSeq	NM_005985.2	ILMN_5450	SNAI1	NM_005985.2	NM_005985.2		6615	18765740	NM_005985.2	SNAI1	NP_005976.2	ILMN_1758086	0005340010	S	1289	CACGAGGTGTGACTAACTATGCAATAATCCACCCCCAGGTGCAGCCCCAG	20	+	48038424-48038473	20q13.13d	Homo sapiens snail homolog 1 (Drosophila) (SNAI1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SNAH; SNA; SLUGH2; dJ710H13.1	SNAH; SNA; SLUGH2; dJ710H13.1
Homo sapiens	Unigene	Hs.564962	ILMN_117530	HS.564962	Hs.564962		Hs.564962		19390772	BM931599			ILMN_1854165	0007380215	S	14	CAACAGGACCGAAATTCAATAACCACTCCCTGCACCCCCTACACACGGAA	16	-	12918683-12918732		UI-E-EJ1-ajk-p-22-0-UI.r1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajk-p-22-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	XR_038835.1	ILMN_339743	LOC401805	XR_038835.1	XR_038835.1		401805	169207827	XR_038835.1	LOC401805		ILMN_3281438	0003610008	M	271	ACACTCTGCGAGTTTTACTTGCAGGGTTATCGAGCTTTCAGGAATGATCC				15q11.2a	PREDICTED: Homo sapiens misc_RNA (LOC401805), partial miscRNA.					
Homo sapiens	RefSeq	XR_038835.1	ILMN_339743	LOC401805	XR_038835.1	XR_038835.1		401805	169207827	XR_038835.1	LOC401805		ILMN_3204933	0006580398	A	211	ACTCCTTACTCTCTTTTGGGTTTGGTCTTCACGGTTTCTTTTGTTGCCTT				15q11.2a	PREDICTED: Homo sapiens misc_RNA (LOC401805), partial miscRNA.					
Homo sapiens	Unigene	Hs.566241	ILMN_118594	HS.566241	Hs.566241		Hs.566241		6041242	AW086168			ILMN_1884441	0004810647	S	141	AACACATCAAAATGGCACTGGGCATAGTAATAAAGAATATAAAACCATGA	5	+	156984510-156984559		xc77d09.x1 NCI_CGAP_Ov32 Homo sapiens cDNA clone IMAGE:2590289 3, mRNA sequence					
Homo sapiens	RefSeq	XM_926092.1	ILMN_33753	MGC16025	XM_926092.1	XM_926092.1		85009	88954080	XM_926092.1	MGC16025	XP_931185.1	ILMN_1757561	0005050152	A	1998	GGCCCGTTCCCACAGCACCTGGCACACAGCAGGAGCCATGAATGTTCTTT	2	-	239780037-239780086	2q37.3d	PREDICTED: Homo sapiens hypothetical protein MGC16025 (MGC16025), mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]		
Homo sapiens	RefSeq	NM_001001433.1	ILMN_12925	STX16	NM_001001433.1	NM_001001433.1		8675	47778942	NM_001001433.1	STX16	NP_001001433.1	ILMN_1803698	0005340221	I	818	TGAGTAGTCACATCACCTCCAGCCCTCTGCATTCACGTAGCATTGCTGCG	20	+	56660551-56660600	20q13.32a	Homo sapiens syntaxin 16 (STX16), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9587053] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 9587053] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9587053] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25 [goid 31201] [pmid 15215310] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 9464276] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [pmid 15215310] [evidence IDA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [pmid 15215310] [evidence IDA]	hsyn16; SYN16; MGC90328	SYN16; hsyn16; MGC90328
Homo sapiens	RefSeq	NM_003763.3	ILMN_12925	STX16	NM_001001433.1	NM_001001433.1		8675	47778942	NM_001001433.1	STX16	NP_001001433.1	ILMN_1741942	0007040315	A	4595	GTGCTGGCTGGGCCATGCTTGTGAAGTGATGTGTGTCTCTGATTTAACGG	20	+	56687635-56687684	20q13.32a	Homo sapiens syntaxin 16 (STX16), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9587053] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 9587053] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9587053] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25 [goid 31201] [pmid 15215310] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 9464276] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [pmid 15215310] [evidence IDA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [pmid 15215310] [evidence IDA]	hsyn16; SYN16; MGC90328	SYN16; hsyn16; MGC90328
Homo sapiens	RefSeq	XM_001714875.1	ILMN_346705	LOC100128419	XM_001714875.1	XM_001714875.1		100128419	169172509	XM_001714875.1	LOC100128419	XP_001714927.1	ILMN_3266492	0002710167	M	1944	GCCTGCTTGCTGTTTAATGTTGTTCCTGGAGAAGAGGGAAGGCTCGGTCC				8q12.1a	PREDICTED: Homo sapiens similar to hCG2036697 (LOC100128419), mRNA.					
Homo sapiens	RefSeq	NM_022064.2	ILMN_29794	RNF123	NM_022064.2	NM_022064.2		63891	37588868	NM_022064.2	RNF123	NP_071347.2	ILMN_1663605	0004880068	S	4105	CCTTTGCCCTTCTCCTGTATCCCACACCACCACATCCAACCTCCTTGCCT	3	+	49733484-49733533	3p21.31c	Homo sapiens ring finger protein 123 (RNF123), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KPC1; DKFZp686C2222; FP1477; FLJ12565; MGC163504	KPC1; DKFZp686C2222; FP1477; FLJ12565; MGC163504
Homo sapiens	RefSeq	XM_933449.1	ILMN_30665	LOC646156	XM_933449.1	XM_933449.1		646156	89037970	XM_933449.1	LOC646156	XP_938542.1	ILMN_1793819	0006400435	S	447	TGGGCAGTCTTGGGATTGCGAGCGCGCGCGGCCTGAGAGTCCGTACCCTT	15	+	19047263-19047312		PREDICTED: Homo sapiens hypothetical protein LOC646156 (LOC646156), mRNA.					
Homo sapiens	RefSeq	NM_144582.2	ILMN_27405	TEX261	NM_144582.2	NM_144582.2		113419	42518075	NM_144582.2	TEX261	NP_653183.2	ILMN_1692272	0005870382	S	3155	CAAGGAGCTTTGGCTATACTCTCTCCTCCCGACCCCCACCCTGGCATACT	2	-	71213230-71213279	2p13.3c	Homo sapiens testis expressed 261 (TEX261), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TEG-261; MGC32043	TEG-261; MGC32043
Homo sapiens	RefSeq	NM_178526.1	ILMN_5992	SLC25A42	NM_178526.2	NM_178526.2		284439	141801957	NM_178526.2	SLC25A42	NP_848621.1	ILMN_1763464	0005310121	S	2567	TCTGCCTTCCTTGCATGTGGCCACCAGCCATCCCTGATCTTGTCCCCAGA	19	+	19084144-19084193	19p13.11b	Homo sapiens solute carrier family 25, member 42 (SLC25A42), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC26694	MGC26694
Homo sapiens	RefSeq	NM_001004431.1	ILMN_42199	METRNL	XM_941466.2	XM_941466.2		284207	113427662	XM_941466.2	METRNL	XP_946559.1	ILMN_1801610	0000050095	A	370	ACAGGCTTCCAGTACGAGCTGGTTAGGAGGCACAGGGCGTCGGACCTGCA				17q25.3h	PREDICTED: Homo sapiens meteorin, glial cell differentiation regulator-like (METRNL), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				MGC99788
Homo sapiens	RefSeq	XM_941466.1	ILMN_42199	METRNL	XM_941466.2	XM_941466.2		284207	113427662	XM_941466.2	METRNL	XP_946559.1	ILMN_1790014	0000010224	A	188	CCGTGTGCATCAGGTCCTTCACGGACTCCTCGGGGGCCAATATTTATTTG				17q25.3h	PREDICTED: Homo sapiens meteorin, glial cell differentiation regulator-like (METRNL), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	RefSeq	XM_941466.1	ILMN_42199	METRNL	XM_941466.2	XM_941466.2		284207	113427662	XM_941466.2	METRNL	XP_946559.1	ILMN_1688775	0004150689	I	1084	TCCCGTGTCTTAAAACGCCTTGGTGTGCCGTCTGATACTGTTCTCTAAAG				17q25.3h	PREDICTED: Homo sapiens meteorin, glial cell differentiation regulator-like (METRNL), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	RefSeq	NM_153184.2	ILMN_27645	CADM2	NM_153184.2	NM_153184.2		253559	54607030	NM_153184.2	CADM2	NP_694854.2	ILMN_1664679	0004150471	S	2966	TGACAGTATGGTAGCTATACTTGTGATGTCTGACGCATGATGGCCTATGG	3	+	86116516-86116565	3p12.1a	Homo sapiens cell adhesion molecule 2 (CADM2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			NECL3; MGC104534; IGSF4D; synCAM2; Necl-3; MGC138343; MGC138341	NECL3; MGC104534; IGSF4D; Necl-3; MGC138341; synCAM2; MGC138343
Homo sapiens	Unigene	Hs.242774	ILMN_83041	HS.242774	Hs.242774		Hs.242774		24723174	CA391357			ILMN_1852041	0004730487	S	174	CCAGCCAGACTCTCAAGTTCTCTACATGGCTGTGCAACCCCATCACAGAC	17	+	5313954-5314003		cs14c01.y1 Human Retinal pigment epithelium/choroid cDNA (Un-normalized, unamplified): cs Homo sapiens cDNA clone cs14c01 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002971.2	ILMN_6836	SATB1	NM_002971.2	NM_002971.2		6304	33356175	NM_002971.2	SATB1	NP_002962.1	ILMN_1690646	0003130669	S	2142	TCTCCAGCAGAGTCAGATGAGGAAAACCGACAGAAGACCCGGCCACGAAC	3	-	18366012-18366061	3p24.3c	Homo sapiens SATB homeobox 1 (SATB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1505028] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 15851481] [evidence IMP]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [pmid 1505028] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with double-stranded DNA [goid 3690] [pmid 1505028] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_181803.1	ILMN_6398	UBE2C	NM_181803.1	NM_181803.1		11065	32967290	NM_181803.1	UBE2C	NP_861519.1	ILMN_1714730	0005310471	A	202	CCCTCATGAACCCAACATTGATAGTCCCTTGAACACACATGCTGCCGAGC	20	+	43875503-43875510:43877900-43877923:43877924-43877941	20q13.12b	Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript variant 6, mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9122200] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 15504738] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [pmid 15504738] [evidence NAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyclins, proteins whose levels in a cell varies markedly during the cell cycle, and which play key roles in regulating cell cycle phase transitions [goid 8054] [pmid 9122200] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 9122200] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that activates or increases the rate of progression from anaphase/telophase (high mitotic CDK activity) to G1 (low mitotic CDK activity) [goid 31536] [pmid 9122200] [evidence IMP]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9122200] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBCH10; dJ447F3.2	UBCH10; dJ447F3.2
Homo sapiens	RefSeq	NM_058174.1	ILMN_21525	COL6A2	NM_001849.3	NM_001849.3		1292	115527061	NM_001849.3	COL6A2	NP_001840.3	ILMN_1809928	0002750356	A	2495	CTCTGCCCGGACCCTCAGATCGTGTGCCCAGACCTTCCCTGCCAAACAGA	21	+	46370570-46370579:46370845-46370883:46376296-46376296	21q22.3f	Homo sapiens collagen, type VI, alpha 2 (COL6A2), transcript variant 2C2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence NAS]	PP3610; DKFZp586E1322	PP3610; DKFZp586E1322
Homo sapiens	RefSeq	NM_001849.2	ILMN_21525	COL6A2	NM_001849.3	NM_001849.3		1292	115527061	NM_001849.3	COL6A2	NP_001840.3	ILMN_1783909	0003390458	I	3069	TGTTCCACGAGAAGGACTATGACAGCCTGGCGCAACCCGGCTTCTTCGAC	21	+	46376821-46376870	21q22.3f	Homo sapiens collagen, type VI, alpha 2 (COL6A2), transcript variant 2C2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence NAS]	PP3610; DKFZp586E1322	PP3610; DKFZp586E1322
Homo sapiens	RefSeq	NM_018154.2	ILMN_26148	ASF1B	NM_018154.2	NM_018154.2		55723	67782340	NM_018154.2	ASF1B	NP_060624.1	ILMN_1695414	0002630673	S	1527	TCCTCTGCTAGGACCAGGGTGATTTCAAGCCAGGGAAGCAACTGGGACCC	19	-	14230475-14230524	19p13.12c	Homo sapiens ASF1 anti-silencing function 1 homolog B (S. cerevisiae) (ASF1B), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [evidence IEA]	FLJ10604; CIA-II	FLJ10604; CIA-II
Homo sapiens	RefSeq	NR_029667.1	ILMN_387819	MIR122	NR_029667.1	NR_029667.1		406906	262205241	NR_029667.1	MIR122		ILMN_3309524	0003190224	S	6	CAGAGCTGTGGAGTGTGACAATGGTGTTTGTGTCTAAACTATCAAACGCC				18q21.31b	Homo sapiens microRNA 122 (MIR122), microRNA.					
Homo sapiens	RefSeq	NM_018309.1	ILMN_12297	TBC1D23	NM_018309.1	NM_018309.1		55773	8922841	NM_018309.1	TBC1D23	NP_060779.1	ILMN_2228044	0002690427	S	1548	CTCCTGTGGATCGGCATGTGAGCAGCAGTGACAGAGTGGGCAAGCCTTAC	3	+	101512064-101512076:101517633-101517669	3q12.1c-q12.2a	Homo sapiens TBC1 domain family, member 23 (TBC1D23), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	NS4ATP1; FLJ11046; DKFZp667G062	NS4ATP1; FLJ11046; DKFZp667G062
Homo sapiens	RefSeq	NM_001001349.1	ILMN_13698	NKIRAS2	NM_001001349.1	NM_001001349.1		28511	47777757	NM_001001349.1	NKIRAS2	NP_001001349.1	ILMN_1677481	0001980427	I	295	CCTCTACTACCCTGCTACCCGGTTACCTCTTCGCCTCTTGGTCGTCGAGC	17	+	37422858-37422907	17q21.2b	Homo sapiens NFKB inhibitor interacting Ras-like 2 (NKIRAS2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 10657303] [evidence NAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10657303] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	KBRAS2; MGC74742; kappaB-Ras2; DKFZP434N1526	KBRAS2; MGC74742; kappaB-Ras2; DKFZP434N1526
Homo sapiens	RefSeq	NM_005054.2	ILMN_172937	RGPD5	NM_005054.2	NM_005054.2		84220	83267876	NM_005054.2	RGPD5	NP_005045.2	ILMN_2320574	0000070575	A	514	GATGGAATAAACTTTTTGACTTGATTCAGTCAGAACTTTATGTAAGACCT	2	+	109923071-109923120	2q13b	Homo sapiens RANBP2-like and GRIP domain containing 5 (RGPD5), transcript variant 1, mRNA.		The directed movement of substances within a cell [goid 46907] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RGP5; RANBP2L1; DKFZp686I1842; BS-63	RGP5; RANBP2L1; DKFZp686I1842; BS-63
Homo sapiens	RefSeq	NM_005054.2	ILMN_172937	RGPD5	NM_005054.2	NM_005054.2		84220	83267876	NM_005054.2	RGPD5	NP_005045.2	ILMN_2246256	0001340541	I	3268	TAAAACTATTTAGATTTGATGCTGAGGTAAGGCAGTGGAAAGAAAGGGGC	2	+	109951178-109951227	2q13b	Homo sapiens RANBP2-like and GRIP domain containing 5 (RGPD5), transcript variant 1, mRNA.		The directed movement of substances within a cell [goid 46907] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RGP5; RANBP2L1; DKFZp686I1842; BS-63	RGP5; RANBP2L1; DKFZp686I1842; BS-63
Homo sapiens	RefSeq	NM_201283.1	ILMN_26807	EGFR	NM_201282.1	NM_201282.1		1956	41327731	NM_201282.1	EGFR	NP_958439.1	ILMN_1696521	0006330307	A	1366	GTGGCATTTAGGGGTGACTCCTTCACACATACTCCTCCTCTGGATCCACA	7	+	55189236-55189285	7p11.2c	Homo sapiens epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) (EGFR), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9103388] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12828935] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12435727] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 14702346] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8845374] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8493579] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15475003] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10567358] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10648629] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10734310] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10913131] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11823423] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11894095] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12218189] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12593796] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14560030] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14665621] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15574420] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16407834] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8639530] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9356464] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15465819] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9544989] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles [goid 30122] [pmid 14702346] [evidence TAS]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 12925580] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 12828935] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7736574] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 12435727] [evidence IDA]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 12435727] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 12435727] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 12435727] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 15082764] [evidence IDA]; A series of molecular signals that leads to the upregulation of calcium-dependent phospholipase A2 activity in response to the signal [goid 43006] [pmid 12435727] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [pmid 10572067] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [pmid 12828935] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 10572067] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IEA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [pmid 12435727] [evidence IMP]; Any process that modulates the activity of the enzyme nitric-oxide synthase [goid 50999] [pmid 12828935] [evidence IDA]; The process by which a protein is incorporated into a biological membrane [goid 51205] [pmid 12435727] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 6325948] [evidence NAS];  [goid 4710] [pmid 15542601] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7736574] [evidence IDA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [evidence IEA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 12435727] [evidence IDA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 6325948] [evidence NAS]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 2790960] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Modulates the activity of nitric oxide synthase [goid 30235] [pmid 12828935] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16777603] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10572067] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 14702346] [evidence IDA]	ERBB1; ERBB; mENA; HER1; PIG61	ERBB1; HER1; ERBB; mENA; PIG61
Homo sapiens	RefSeq	NM_201282.1	ILMN_26807	EGFR	NM_201282.1	NM_201282.1		1956	41327731	NM_201282.1	EGFR	NP_958439.1	ILMN_1755535	0004070019	I	2139	CTTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACA	7	+	55196746-55196795	7p11.2c	Homo sapiens epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) (EGFR), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9103388] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12828935] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12435727] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 14702346] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8845374] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8493579] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15475003] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10567358] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10648629] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10734310] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10913131] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11823423] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11894095] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12218189] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12593796] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14560030] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14665621] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15574420] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16407834] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8639530] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9356464] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15465819] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9544989] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles [goid 30122] [pmid 14702346] [evidence TAS]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 12925580] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 12828935] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7736574] [evidence IDA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 12435727] [evidence IDA]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 12435727] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 12435727] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 12435727] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 15082764] [evidence IDA]; A series of molecular signals that leads to the upregulation of calcium-dependent phospholipase A2 activity in response to the signal [goid 43006] [pmid 12435727] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of MAP kinase activity [goid 43406] [pmid 10572067] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [pmid 12828935] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 10572067] [evidence IDA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IEA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [pmid 12435727] [evidence IMP]; Any process that modulates the activity of the enzyme nitric-oxide synthase [goid 50999] [pmid 12828935] [evidence IDA]; The process by which a protein is incorporated into a biological membrane [goid 51205] [pmid 12435727] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 6325948] [evidence NAS];  [goid 4710] [pmid 15542601] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7736574] [evidence IDA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [evidence IEA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 12435727] [evidence IDA]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 6325948] [evidence NAS]; Combining with an epidermal growth factor to initiate a change in cell activity [goid 5006] [pmid 2790960] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Modulates the activity of nitric oxide synthase [goid 30235] [pmid 12828935] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16777603] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10572067] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 14702346] [evidence IDA]	ERBB1; ERBB; mENA; HER1; PIG61	ERBB1; HER1; ERBB; mENA; PIG61
Homo sapiens	RefSeq	NM_007107.2	ILMN_19434	SSR3	NM_007107.2	NM_007107.2		6747	28416942	NM_007107.2	SSR3	NP_009038.1	ILMN_1806906	0002810523	S	2573	GCCACTAGATGGCAGTGCCTGTATAGATGGGGAAAAAATTGCCACCATTC	3	-	157741678-157741727	3q25.31b	Homo sapiens signal sequence receptor, gamma (translocon-associated protein gamma) (SSR3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A translocation complex that constitutes the specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. Composed of a heterotetramer of alpha, beta, gamma and delta subunits (translocon-associated proteins or TRAPs). In yeast it is a heterotrimeric complex consisting of Sec61p, Sbh1p, and Sss1p. The Sec61 complex functions in cotranslational and posttranslational translocation events [goid 5784] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 7916687] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The targeting of proteins to a membrane that occurs during translation. The transport of most secretory proteins, particularly those with more than 100 amino acids, into the endoplasmic reticulum lumen occurs in this manner, as does the import of some proteins into mitochondria [goid 6613] [evidence IEA]	Interacting selectively with a signal sequence, a specific peptide sequence found on protein precursors or mature proteins that dictates where the mature protein is localized [goid 5048] [pmid 7916687] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	SSR gamma; TRAPG	SSR gamma; TRAPG
Homo sapiens	RefSeq	XM_001723683.1	ILMN_349008	LOC100132292	XM_001723683.1	XM_001723683.1		100132292	169208500	XM_001723683.1	LOC100132292	XP_001723735.1	ILMN_3246747	0004590180	S	241	CCCATGGCACTGGGAAGGCTGGAGACAGGAAGAGGAAGACAGAGCTCTTA	15	-	20810908-20810930:20813621-20813647	15q11.2c	PREDICTED: Homo sapiens hypothetical protein LOC100132292 (LOC100132292), mRNA.					
Homo sapiens	RefSeq	NM_001319.5	ILMN_17274	CSNK1G2	NM_001319.5	NM_001319.5		1455	21314777	NM_001319.5	CSNK1G2	NP_001310.2	ILMN_1706521	0001240192	S	2352	GGCATTTACGTTTCTCTGATGCTCCCTTGAAGCCATAGAATTTAGGGGCT	19	+	1932253-1932302	19p13.3h	Homo sapiens casein kinase 1, gamma 2 (CSNK1G2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9403068] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9403068] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9403068] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CK1g2	CK1g2
Homo sapiens	RefSeq	NM_002604.1	ILMN_3430	PDE7A	NM_002604.1	NM_002604.1		5150	24429563	NM_002604.1	PDE7A	NP_002595.1	ILMN_2262444	0004890592	I	2824	AAATTAGCTGGGTGTGATGGCCACTTGGGAGGCTGAGATAGGAGAATCGC	8	-	66796699-66796748	8q13.1a	Homo sapiens phosphodiesterase 7A (PDE7A), transcript variant 2, mRNA.	A generic term for parts of cells prepared by disruptive biochemical techniques [goid 267] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]	Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [pmid 8389765] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HCP1; PDE7	HCP1; PDE7
Homo sapiens	RefSeq	NM_176895.1	ILMN_5193	PPAP2A	NM_176895.1	NM_176895.1		8611	29171737	NM_176895.1	PPAP2A	NP_795714.1	ILMN_1676296	0001770201	I	578	CGTCACATCCACTGTCCTCATCCTAGTGGGGGTTGGCTTGCCCATTTCCT	5	-	54830720-54830769	5q11.2e	Homo sapiens phosphatidic acid phosphatase type 2A (PPAP2A), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9468526] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9705349] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9705349] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9705349] [evidence NAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [pmid 9468526] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9468526] [evidence NAS]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [pmid 9305923] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 19216] [pmid 9468526] [evidence NAS]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 9468526] [evidence NAS]; The process of removing one or more phosphate groups from a phosphorylated lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents [goid 46839] [pmid 9468526] [evidence TAS]	Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [pmid 9468526] [evidence IDA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [pmid 9570154] [evidence NAS]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [pmid 9705349] [evidence EXP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PAP2a2; LLP1a; PAP-2a; LPP1; PAP2alpha2; PAP2; PAPalpha1	PAP2a2; LLP1a; PAP-2a; LPP1; PAP2alpha2; PAP2; PAPalpha1
Homo sapiens	RefSeq	NM_176895.1	ILMN_5193	PPAP2A	NM_176895.1	NM_176895.1		8611	29171737	NM_176895.1	PPAP2A	NP_795714.1	ILMN_2343278	0004490739	A	981	GCCAGGATGAAGGGAGACTGGGCAAGACTCTTACGCCCCACACTGCAATT	5	-	54822617-54822666	5q11.2e	Homo sapiens phosphatidic acid phosphatase type 2A (PPAP2A), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9468526] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9705349] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9705349] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9705349] [evidence NAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [pmid 9468526] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9468526] [evidence NAS]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [pmid 9305923] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving lipids [goid 19216] [pmid 9468526] [evidence NAS]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 9468526] [evidence NAS]; The process of removing one or more phosphate groups from a phosphorylated lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents [goid 46839] [pmid 9468526] [evidence TAS]	Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [pmid 9468526] [evidence IDA]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [pmid 9570154] [evidence NAS]; Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [pmid 9705349] [evidence EXP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PAP2a2; LLP1a; PAP-2a; LPP1; PAP2alpha2; PAP2; PAPalpha1	PAP2a2; LLP1a; PAP-2a; LPP1; PAP2alpha2; PAP2; PAPalpha1
Homo sapiens	RefSeq	NM_058166.3	ILMN_24297	TRIM6	NM_058166.3	NM_058166.3		117854	51477693	NM_058166.3	TRIM6	NP_477514.1	ILMN_1654786	0001660379	I	14	GAGGACGCGGCTGCTTCAAGTCCTTGGCTCTGATCCAGGCCACAGATTCC	11	+	5573936-5573985	11p15.4c	Homo sapiens tripartite motif-containing 6 (TRIM6), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF89	RNF89
Homo sapiens	RefSeq	NM_001003818.1	ILMN_24297	TRIM6	NM_058166.3	NM_058166.3		117854	51477693	NM_058166.3	TRIM6	NP_477514.1	ILMN_1656910	0006040653	A	2983	TGGCACTGGCTGTCCCATATGGTATCCAGGAGCCACCAATGTCTGTTGAG	11	+	5590532-5590581	11p15.4c	Homo sapiens tripartite motif-containing 6 (TRIM6), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF89	RNF89
Homo sapiens	RefSeq	XM_371243.4	ILMN_42661	LOC388621	XM_941195.2	XM_941195.2		388621	113412045	XM_941195.2	LOC388621	XP_946288.1	ILMN_1677262	0000730379	S	471	AGCCTGAGCTGCTGGAAACTATTCCCTATGAATTCATGGCATAATAGGTG				1p34.2d	PREDICTED: Homo sapiens similar to ribosomal protein L21 (LOC388621), mRNA.					
Homo sapiens	RefSeq	NM_003945.3	ILMN_8923	ATP6V0E1	NM_003945.3	NM_003945.3		8992	50593534	NM_003945.3	ATP6V0E1	NP_003936.1	ILMN_2071937	0004730343	S	740	TCCAGTGGGGTGGTCAGTAGGAGAGCACGTTCAGAGGGAAGAGCCATCTC	5	+	172394364-172394413	5q35.2a	Homo sapiens ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 (ATP6V0E1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9556572] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 9556572] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9556572] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [pmid 9556572] [evidence TAS]	Vma21p; ATP6V0E; Vma21; ATP6H; M9.2	Vma21p; ATP6V0E; Vma21; ATP6H; M9.2
Homo sapiens	RefSeq	NM_003945.3	ILMN_8923	ATP6V0E1	NM_003945.3	NM_003945.3		8992	50593534	NM_003945.3	ATP6V0E1	NP_003936.1	ILMN_1715635	0002320110	S	256	GGCTGATTGCAATTCTGGCCCAACTCAACCCTCTCTTTGGACCGCAATTG	5	+	172379849-172379898	5q35.2a	Homo sapiens ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 (ATP6V0E1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9556572] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 9556572] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9556572] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [pmid 9556572] [evidence TAS]	Vma21p; ATP6V0E; Vma21; ATP6H; M9.2	Vma21p; ATP6V0E; Vma21; ATP6H; M9.2
Homo sapiens	RefSeq	NM_021994.1	ILMN_2173	ZNF277	NM_021994.2	NM_021994.2		11179	126723500	NM_021994.2	ZNF277	NP_068834.2	ILMN_1681628	0005870180	S	1265	CTAAACACACTTCGCTGCTCCCCGATAGAAAGACGTGGGATCAACTGGAG	7	+	111768289-111768337:111769852-111769852	7q31.1c	Homo sapiens zinc finger protein 277 (ZNF277), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZNF277P; ZNF277; NRIF4	NRIF4
Homo sapiens	RefSeq	NM_016525.3	ILMN_7864	UBAP1	NM_016525.3	NM_016525.3		51271	22212941	NM_016525.3	UBAP1	NP_057609.2	ILMN_1807596	0006760543	S	2351	CCCCAGCCTGTTTCTTTTGGCTTGGTTTGGACCACAGTCCTCTGCTACCC	9	+	34241536-34241585	9p13.3d-p13.3c	Homo sapiens ubiquitin associated protein 1 (UBAP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]			MGC8710; UAP; UBAP; NAG20; MGC119669	MGC8710; UAP; UBAP; NAG20; MGC119669
Homo sapiens	RefSeq	XM_936613.1	ILMN_45514	LOC645971	XM_928936.1	XM_928936.1		645971	89056887	XM_928936.1	LOC645971	XP_934029.1	ILMN_1654857	0000430066	S	121	GAGACTTCCCCTCTGAAGGAAACACCTGTGCCCTTCAAGGATGACGCCAC	19	+	54621620-54621638:54622359-54622389	19q13.33b	PREDICTED: Homo sapiens hypothetical LOC645971 (LOC645971), mRNA.					
Homo sapiens	Unigene	Hs.542875	ILMN_106577	HS.542875	Hs.542875		Hs.542875		10857021	AV739440			ILMN_1887367	0002000711	S	72	CAGCCATAGGACACTGACACAGAAATGTTTATAAGAAATCACCACTAAAG					AV739440 CB Homo sapiens cDNA clone CBDAND09 5, mRNA sequence					
Homo sapiens	RefSeq	XM_927152.1	ILMN_42464	LOC643884	XM_927152.1	XM_927152.1		643884	88997685	XM_927152.1	LOC643884	XP_932245.1	ILMN_1686410	0001400553	S	121	AAAGAGACGAACATCAGCGTAGGAGACTCAACTCCTCAGCAACAAAGCAG	6	+	113650181-113650230	6q21j	PREDICTED: Homo sapiens similar to Cytokine-inducible SH2-containing protein 5 (Suppressor of cytokine signaling 5) (SOCS-5) (Cytokine-inducible SH2 protein 6) (CIS-6) (LOC643884), mRNA.					
Homo sapiens	RefSeq	NM_001004741.1	ILMN_175040	OR5M10	NM_001004741.1	NM_001004741.1		390167	52317260	NM_001004741.1	OR5M10	NP_001004741.1	ILMN_2136737	0004730220	S	482	TGCTGACCTTTCACTTATCCTTCTGTGGCTCCCTTGAAATCAATCATTTC	11	-	56344666-56344715	11q11c	Homo sapiens olfactory receptor, family 5, subfamily M, member 10 (OR5M10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-207	OR11-207
Homo sapiens	RefSeq	NM_018972.2	ILMN_14581	GDAP1	NM_018972.2	NM_018972.2		54332	108773796	NM_018972.2	GDAP1	NP_061845.2	ILMN_2276933	0002510296	I	166	CCATTGGACGCATTCCTTCAGCTCTCAAAAGGTGCGCTTGGTAATTGCTG	8	+	75262783-75262813:75263509-75263527	8q21.11b	Homo sapiens ganglioside-induced differentiation-associated protein 1 (GDAP1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				CMT2G; CMT2K; CMT4A
Homo sapiens	RefSeq	XM_941195.1	ILMN_43918	LOC388621	XM_371243.5	XM_371243.5		388621	113408499	XM_371243.5	LOC388621	XP_371243.1	ILMN_1799043	0003370296	S	551	AATAGAAGACTTCCGGACTGTAAAAATGTTTCTCTTCATTGAGTAGAAGT	1	-	40571269-40571318	1p34.2d	PREDICTED: Homo sapiens similar to ribosomal protein L21 (LOC388621), mRNA.					
Homo sapiens	RefSeq	XM_001722245.1	ILMN_344071	LOC731109	XM_001722245.1	XM_001722245.1		731109	169160931	XM_001722245.1	LOC731109	XP_001722297.1	ILMN_3225648	0004900463	A	522	AGAATCAATGAGAGCTCCCCCCAGCCAGGAGACAGCGGACAACCAGGGTA					PREDICTED: Homo sapiens similar to surface antigen BspA-like (LOC731109), mRNA.					
Homo sapiens	RefSeq	NM_002567.2	ILMN_16687	PEBP1	NM_002567.2	NM_002567.2		5037	38016928	NM_002567.2	PEBP1	NP_002558.1	ILMN_1688089	0003850273	S	1241	GTATGTCACTCTGGTCCCTTTAAAGAGCAATCCTGGAAGAAGCAGGAGGG	12	+	117067523-117067572	12q24.23a	Homo sapiens phosphatidylethanolamine binding protein 1 (PEBP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 8429] [pmid 7637590] [evidence TAS]	PEBP; RKIP; PBP; HCNP	PEBP; RKIP; PBP; HCNP
Homo sapiens	RefSeq	NR_029685.1	ILMN_387856	MIR144	NR_029685.1	NR_029685.1		406936	262205324	NR_029685.1	MIR144		ILMN_3309629	0001110653	S	1	GGGGCCCTGGCTGGGATATCATCATATACTGTAAGTTTGCGATGAGACAC				17q11.2a	Homo sapiens microRNA 144 (MIR144), microRNA.					
Homo sapiens	RefSeq	NM_032495.4	ILMN_21632	HOPX	NM_032495.4	NM_032495.4		84525	47717119	NM_032495.4	HOPX	NP_115884.3	ILMN_1735570	0001230369	I	168	GAGAAGGGTCTAGCGGAGCACAGGTCACCAGCTGGGCAACATTCAGAAAG	4	-	57218750-57218799	4q12e	Homo sapiens HOP homeobox (HOPX), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17192267] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [pmid 17576768] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that activates or increase the rate of skeletal muscle regeneration [goid 43415] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [pmid 17576768] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOP; MGC20820; LAGY; Cameo; SMAP31; OB1; Toto; NECC1	HOP; MGC20820; LAGY; Cameo; SMAP31; OB1; Toto; NECC1
Homo sapiens	RefSeq	XM_499363.2	ILMN_34720	LOC653852	XM_499363.2	XM_499363.2		653852	89027549	XM_499363.2	LOC653852	XP_499363.2	ILMN_1779987	0002450170	S	271	CTGGCCCAATGCTCCCTCCAGGTCAGTAGTCACCGGTGTGTCATCAGAGA					PREDICTED: Homo sapiens similar to Filamin-C (Gamma-filamin) (Filamin-2) (Protein FLNc) (Actin-binding-like protein) (ABP-L) (ABP-280-like protein) (LOC653852), mRNA.					
Homo sapiens	RefSeq	NM_000632.2	ILMN_163690	ITGAM	NM_000632.3	NM_000632.3		3684	88501733	NM_000632.3	ITGAM	NP_000623.2	ILMN_1685009	0001710070	S	4403	GGTTTCCTTCAGACAGATTCCAGGCGATGTGCAAGTGTATGCACGTGTGC	16	+	31251375-31251424	16p11.2c	Homo sapiens integrin, alpha M (complement component 3 receptor 3 subunit) (ITGAM), transcript variant 2, mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 2563162] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2563162] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [pmid 15004192] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MO1A; MAC1A; CD11B; MAC-1; CR3A; MGC117044	MO1A; MAC1A; CD11B; MAC-1; CR3A; MGC117044
Homo sapiens	RefSeq	NM_004147.3	ILMN_22955	DRG1	NM_004147.3	NM_004147.3		4733	51093843	NM_004147.3	DRG1	NP_004138.1	ILMN_1658259	0007560576	S	1030	GCCAGTTACCAGATTACACATCCCCAGTGGTGCTTCCTTACTCCAGGACC	22	+	30153063-30153112	22q12.2c	Homo sapiens developmentally regulated GTP binding protein 1 (DRG1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 9824680] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1280421] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 9824680] [evidence TAS]	NEDD3; DKFZp434N1827	DKFZp434N1827; NEDD3
Homo sapiens	RefSeq	NM_001010908.1	ILMN_25280	C1QL3	NM_001010908.1	NM_001010908.1		389941	58801558	NM_001010908.1	C1QL3	NP_001010908.1	ILMN_1776576	0000540612	S	1738	GTTTGAACACTGGATTCGTATGGCTAACGTCAGTGAATCAAGGATCCCAG	10	-	16596453-16596502	10p13a	Homo sapiens complement component 1, q subcomponent-like 3 (C1QL3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	C1ql; K100	C1ql; K100
Homo sapiens	RefSeq	NM_013290.3	ILMN_9971	PSMC3IP	NM_013290.4	NM_013290.4		29893	142358202	NM_013290.4	PSMC3IP	NP_037422.2	ILMN_1675321	0004260324	I	22	TCGCTTTGCTCCTCCGGAAGGCTTCCCCTTCAGCCAATCACCGTTCGAGG	17	-	37983309-37983358	17q21.31a	Homo sapiens PSMC3 interacting protein (PSMC3IP), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 7490091] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10806355] [evidence NAS]	HOP2; TBPIP; GT198	TBPIP; GT198
Homo sapiens	RefSeq	NM_000754.2	ILMN_2463	COMT	NM_000754.2	NM_000754.2		1312	6466451	NM_000754.2	COMT	NP_000745.1	ILMN_1810941	0000520446	I	165	AGCCAGAGGGCTGGAGCCTGCTCAGAGGTGCTTTGAAGATGCCGGAGGCC	22	+	18328774-18328812:18330050-18330060	22q11.21c	Homo sapiens catechol-O-methyltransferase (COMT), transcript variant MB-COMT, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1707278] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 1707278] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8968737] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42420] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the reaction: S-adenosyl-L-methionine + a catechol = S-adenosyl-L-homocysteine + a guaiacol [goid 16206] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + a catechol = S-adenosyl-L-homocysteine + a guaiacol [goid 16206] [pmid 8968737] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_015321.1	ILMN_27180	CRTC1	NM_015321.2	NM_015321.2		23373	148596964	NM_015321.2	CRTC1	NP_056136.2	ILMN_1699843	0001780097	A	2066	TCCCTCGCCAACGGCCGAGCTTGTGATTCTGAGCTTGCAATGCCGCCAAG	19	+	18749265-18749314	19p13.11b	Homo sapiens CREB regulated transcription coactivator 1 (CRTC1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14506290] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 14536081] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14506290] [evidence IPI];  [goid 8140] [pmid 14536081] [evidence IDA]	WAMTP1; TORC1; MECT1; FLJ14027; KIAA0616	WAMTP1; MECT1; KIAA0616; TORC1; FLJ14027
Homo sapiens	RefSeq	NM_002076.2	ILMN_177670	GNS	NM_002076.2	NM_002076.2		2799	42490755	NM_002076.2	GNS	NP_002067.1	ILMN_1744517	0006110392	S	4974	CCTGTGTTTGCATCCTCTGTTCCTATTCTGCCCTTGCTCTGTGTCATCTC	12	-	63393579-63393628	12q14.2b-q14.3a	Homo sapiens glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID) (GNS), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars [goid 6027] [pmid 3689315] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of the 6-sulfate group of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate [goid 8449] [pmid 3689315] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	G6S; MGC21274	G6S; MGC21274
Homo sapiens	RefSeq	XR_017249.1	ILMN_178558	LOC646784	XR_017249.1	XR_017249.1		646784	113408835	XR_017249.1	LOC646784		ILMN_3199655	0001780324	A	777	GAAGAGATGTGTAAGAAAGCTCATGCTGCTATACGAGAGAGTCCAGTCTG	1	+	91262769-91262818	1p22.2a	PREDICTED: Homo sapiens misc_RNA (LOC646784), miscRNA.					
Homo sapiens	RefSeq	XM_941595.1	ILMN_31350	LOC652215	XM_941595.1	XM_941595.1		652215	89062504	XM_941595.1	LOC652215	XP_946688.1	ILMN_1773381	0005960064	S	467	ACCTCTTCTGTCTCGGCGCATACCGCGTCGTTTACATGATCCATTGGGCG					PREDICTED: Homo sapiens similar to KDEL receptor (LOC652215), mRNA.					
Homo sapiens	RefSeq	NR_002991.1	ILMN_175759	SNORA5C	NR_002991.1	NR_002991.1		677796	91754173	NR_002991.1	SNORA5C		ILMN_3246708	0002320523	S	88	CCTGGGTCACCTACCCTGGGACCTGGGGATAAGTTTGGCTGTGGACAGTG	7	-	45111166-45111166:45144505-45144553	7p13c	Homo sapiens small nucleolar RNA, H/ACA box 5C (SNORA5C), small nucleolar RNA.				ACA5c	ACA5c
Homo sapiens	RefSeq	XM_935867.1	ILMN_31380	LOC641738	XM_935867.1	XM_935867.1		641738	89027451	XM_935867.1	LOC641738	XP_940960.1	ILMN_1679208	0000670066	S	121	CTGTGTCGGAGTCAGCGCAGCTTTTGAAGCTGGAGAGCATCATATTTTAG					PREDICTED: Homo sapiens hypothetical protein LOC641738 (LOC641738), mRNA.					
Homo sapiens	RefSeq	NM_003913.3	ILMN_139391	PRPF4B	NM_003913.3	NM_003913.3		8899	28872757	NM_003913.3	PRPF4B	NP_003904.2	ILMN_1736021	0007100372	I	5603	CAAGTGATTGTCAGACTTGAGGGCTCATAGAAGTGTTAGGTACGGCTCTC	6	+	4009138-4009187	6p25.2a	Homo sapiens PRP4 pre-mRNA processing factor 4 homolog B (yeast) (PRPF4B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9102632] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9102632] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15452250] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17513757] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PR4H; dJ1013A10.1; PRP4; KIAA0536; PRP4H; PRP4K	PR4H; dJ1013A10.1; PRP4; KIAA0536; PRP4H; PRP4K
Homo sapiens	RefSeq	NM_173499.2	ILMN_22251	SPATA8	NM_173499.2	NM_173499.2		145946	47564113	NM_173499.2	SPATA8	NP_775770.1	ILMN_2168421	0004830112	S	628	CACCTGGAACTCACCTGGAAAGGGCAATCAGCTGGCTCTATATCAGACGC	15	+	95129451-95129500	15q26.2c	Homo sapiens spermatogenesis associated 8 (SPATA8), mRNA.				MGC44294; MGC102678	MGC44294; MGC102678
Homo sapiens	RefSeq	NM_198464.1	ILMN_29889	T-SP1	NM_198464.2	NM_198464.2		203074	110578662	NM_198464.2	T-SP1	NP_940866.2	ILMN_1806464	0003850463	S	735	TGAGAGCTATGATGCCTGCAAGGGTGACAGTGGGGGGCCTCTGGTCTGCA	8	+	10390537-10390558:10395986-10396013	8p23.1c	Homo sapiens tryptophan/serine protease (T-SP1), mRNA.					
Homo sapiens	RefSeq	NM_001048216.1	ILMN_178233	CEMP1	NM_001048216.1	NM_001048216.1		752014	115292428	NM_001048216.1	CEMP1	NP_001041681.1	ILMN_2280816	0000540400	I	1027	TGTGCCAGGGCCAAGGGGACACAGAAGATGGCAGGATGACACTAATGGGG				16p13.3d	Homo sapiens cementum protein 1 (CEMP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			CP-23	CP-23
Homo sapiens	RefSeq	NM_033306.2	ILMN_7434	CASP4	NM_033306.2	NM_033306.2		837	73622124	NM_033306.2	CASP4	NP_150649.1	ILMN_1778059	0006100136	I	17	GCCTTTGTGATCTCACCTGTTGGAATGCACTAATGTTTTCTGAGCCCCTT	11	-	104827370-104827419	11q22.3b	Homo sapiens caspase 4, apoptosis-related cysteine peptidase (CASP4), transcript variant gamma, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 7797510] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 7743998] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ICE(rel)II; TX; Mih1/TX; ICH-2; ICEREL-II	ICE(rel)II; TX; Mih1/TX; ICH-2; ICEREL-II
Homo sapiens	RefSeq	NM_018429.1	ILMN_13496	BDP1	NM_018429.2	NM_018429.2		55814	109637790	NM_018429.2	BDP1	NP_060899.2	ILMN_1687149	0007570563	S	6856	AGGTTCACATGTTGTCAGTTGCTCCAGTTGCTTCCTCTGAGACAGGGCCC	5	+	70818241-70818290	5q13.2b	Homo sapiens B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB (BDP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	TAF3B1; KIAA1241; DKFZp686C01233; TFNR; TFIIIB150; HSA238520; DKFZp686K0831; TFIIIB''; TFIIIB90; KIAA1689; TFC5	KIAA1241; TAF3B1; DKFZp686C01233; TFNR; TFIIIB150; HSA238520; DKFZp686K0831; TFIIIB90; KIAA1689; TFC5
Homo sapiens	RefSeq	NM_138927.1	ILMN_12323	SON	NM_138927.1	NM_138927.1		6651	21040325	NM_138927.1	SON	NP_620305.1	ILMN_2247664	0006350270	I	8008	GCACTAAGTCCTGCATTCCTGTTAAAGCCACTTGGGTCATAAGAAGGGAG	21	+	33871278-33871327	21q22.11c	Homo sapiens SON DNA binding protein (SON), transcript variant f, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10509013] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8031013] [evidence TAS]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914
Homo sapiens	RefSeq	NM_032195.1	ILMN_12323	SON	NM_138927.1	NM_138927.1		6651	21040325	NM_138927.1	SON	NP_620305.1	ILMN_1703427	0005130543	A	6260	GCTAAGGCTGGTGTCCCTTTACCACCAAACCTAAAGCCTGCACCTCCACC	21	+	33851382-33851431	21q22.11c	Homo sapiens SON DNA binding protein (SON), transcript variant f, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10509013] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8031013] [evidence TAS]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914
Homo sapiens	RefSeq	NM_138927.1	ILMN_12323	SON	NM_138927.1	NM_138927.1		6651	21040325	NM_138927.1	SON	NP_620305.1	ILMN_2323302	0004040709	A	5798	ACAGTTAGAGCTCGAAGTCGAACCCCAAGTCGTCGGAGTCGGAGTCATAC	21	+	33849156-33849205	21q22.11c	Homo sapiens SON DNA binding protein (SON), transcript variant f, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10509013] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8031013] [evidence TAS]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914
Homo sapiens	RefSeq	NM_001013440.1	ILMN_2777	MPST	NM_001013440.1	NM_001013440.1		4357	61835216	NM_001013440.1	MPST	NP_001013458.1	ILMN_1672879	0001260736	I	297	AGGGGTGGAGACTTTGCCCCTGTTTGTGCCTTGAAGCCAGCAGGGCCTTG	22	+	35749823-35749872	22q12.3d	Homo sapiens mercaptopyruvate sulfurtransferase (MPST), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid [goid 9440] [pmid 9070219] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 9070219] [evidence TAS]	Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [pmid 9070219] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3-mercaptopyruvate + cyanide = pyruvate + thiocyanate [goid 16784] [evidence IEA]	MGC24539; TST2; MST	MGC24539; TST2; MST
Homo sapiens	RefSeq	NM_003059.2	ILMN_3601	SLC22A4	NM_003059.2	NM_003059.2		6583	24497489	NM_003059.2	SLC22A4	NP_003050.2	ILMN_1685057	0006040398	S	1605	CCTCGGTGCTTACAACAGAATGCTGCCCTACATCGTCATGGGTAGTCTGA	5	+	131663027-131663076	5q31.1b	Homo sapiens solute carrier family 22 (organic cation/ergothioneine transporter), member 4 (SLC22A4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16729965] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9426230] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9426230] [evidence TAS]	The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The regulated release of a fluid by a cell or group of cells in a multicellular organism [goid 7589] [pmid 9426230] [evidence TAS]; The chemical reactions and pathways involving carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 9437] [evidence IEA]; The directed movement into, out of, within or between cells of quaternary ammonium compounds, any compound that can be regarded as derived from ammonium hydroxide or an ammonium salt by replacement of all four hydrogen atoms of the NH4+ ion by organic groups [goid 15697] [evidence IEA]; The directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15879] [pmid 16729965] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 9426230] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 8513] [pmid 9426230] [evidence TAS]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Enables the directed movement of carnitine into, out of, within or between cells. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane [goid 15226] [pmid 16729965] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	OCTN1; MGC40524; MGC34546	OCTN1; MGC40524; MGC34546
Homo sapiens	RefSeq	NM_018509.2	ILMN_26734	LRRC59	NM_018509.2	NM_018509.2		55379	40254923	NM_018509.2	LRRC59	NP_060979.2	ILMN_1786259	0005910411	S	2406	GGAGGGAGCAAGAATCTCATAGTTCAGAGACACAGAGGGCCTTTTAGCCC	17	-	48458971-48459020	17q21.33b	Homo sapiens leucine rich repeat containing 59 (LRRC59), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	PRO1855; FLJ21675	PRO1855; FLJ21675
Homo sapiens	RefSeq	NM_016080.2	ILMN_20299	GLOD4	NM_016080.2	NM_016080.2		51031	34850073	NM_016080.2	GLOD4	NP_057164.2	ILMN_1738656	0005910543	S	1496	GAGTGTCCAGAGGAAACAGAAAGGAATGAGTGTGTGACGTTGCTGCACGC	17	-	609566-609615	17p13.3f	Homo sapiens glyoxalase domain containing 4 (GLOD4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			C17orf25; HC71; CGI-150	C17orf25; HC71; CGI-150
Homo sapiens	RefSeq	NM_023019.1	ILMN_17255	DCTN1	NM_004082.2	NM_004082.2		1639	13259509	NM_004082.2	DCTN1	NP_004073.2	ILMN_1793563	0006400121	A	4738	TAAGCTCTTCCTGCCCCGTTCAGCTTCACTCCCACCCTTTCAGCGTCCTG	2	-	74441983-74442032	2p13.1b	Homo sapiens dynactin 1 (p150, glued homolog, Drosophila) (DCTN1), transcript variant 1, mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [pmid 14718566] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1828535] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 1828535] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 17360970] [evidence NAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15107855] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9722614] [evidence IPI]	P135; DAP-150; HMN7B; DP-150	P135; DAP-150; HMN7B; DP-150
Homo sapiens	RefSeq	NM_004082.2	ILMN_17255	DCTN1	NM_004082.2	NM_004082.2		1639	13259509	NM_004082.2	DCTN1	NP_004073.2	ILMN_1789089	0005560372	I	1158	GAGGGAACTGATACAACTGCAAAGACTAGCAAACTGCGGGGACTGAAGCC	2	-	74457383-74457397:74458067-74458101	2p13.1b	Homo sapiens dynactin 1 (p150, glued homolog, Drosophila) (DCTN1), transcript variant 1, mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [pmid 14718566] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1828535] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 1828535] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 17360970] [evidence NAS]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15107855] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9722614] [evidence IPI]	P135; DAP-150; HMN7B; DP-150	P135; DAP-150; HMN7B; DP-150
Homo sapiens	RefSeq	NM_052820.2	ILMN_26347	CORO2A	NM_003389.2	NM_003389.2		7464	16554582	NM_003389.2	CORO2A	NP_003380.2	ILMN_1813746	0001410609	A	1976	CGCTGAAAGAGATTCCAGTGGGACATGGTGCCGTTTTTCTGTTTGCCTTC	9	-	99926695-99926744	9q22.33b	Homo sapiens coronin, actin binding protein, 2A (CORO2A), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6542] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 8985118] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine [goid 4356] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8985118] [evidence TAS]	WDR2; CLIPINB; IR10	WDR2; CLIPINB; IR10
Homo sapiens	RefSeq	NM_003389.2	ILMN_26347	CORO2A	NM_003389.2	NM_003389.2		7464	16554582	NM_003389.2	CORO2A	NP_003380.2	ILMN_1745703	0007320634	I	173	TACCTCACCATCCTCTCCTGCCAGCTGTTGCAGACTCTGCCTGGGGAACT	9	-	99974773-99974822	9q22.33b	Homo sapiens coronin, actin binding protein, 2A (CORO2A), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6542] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 8985118] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine [goid 4356] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8985118] [evidence TAS]	WDR2; CLIPINB; IR10	WDR2; CLIPINB; IR10
Homo sapiens	RefSeq	XM_932320.1	ILMN_37342	LOC644710	XM_932320.1	XM_932320.1		644710	89025115	XM_932320.1	LOC644710	XP_937413.1	ILMN_1677841	0004830079	S	257	TGCGCATGCGCTCTCCTGGAATACCCAGCCGCTGCGCCTCGAGTTCCGAT	7	-	65596087-65596136		PREDICTED: Homo sapiens hypothetical protein LOC644710 (LOC644710), mRNA.					
Homo sapiens	RefSeq	XM_934161.1	ILMN_44213	LOC653441	XM_934161.1	XM_934161.1		653441	89035554	XM_934161.1	LOC653441	XP_939254.1	ILMN_1767131	0003460762	A	461	TCTCAGGCCCAGATGTATCTACGGCGAACCCTGGGTCGGAATGTGCCTCT	12	-	54094275-54094301:54094332-54094354	12q13.2b	PREDICTED: Homo sapiens similar to polyhomeotic 1-like, transcript variant 2 (LOC653441), mRNA.					
Homo sapiens	RefSeq	NM_152517.1	ILMN_24296	TTC30B	NM_152517.2	NM_152517.2		150737	125988410	NM_152517.2	TTC30B	NP_689730.2	ILMN_1668795	0007000324	S	1887	CTGTGAACTTCATGGCAGAAACATACCTGCTGTTATTGAACAACCCCTGG	2	-	178415588-178415637	2q31.2a	Homo sapiens tetratricopeptide repeat domain 30B (TTC30B), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ30990	
Homo sapiens	RefSeq	XM_926459.1	ILMN_33575	LOC642503	XM_926459.1	XM_926459.1		642503	88972061	XM_926459.1	LOC642503	XP_931552.1	ILMN_1666024	0003140482	S	1	ATGGCCAATGATCTGTGCATGTGGGGAGCCGATATCCAGTCAGTTCCTGG	4	-	1045336-1045385		PREDICTED: Homo sapiens hypothetical protein LOC642503 (LOC642503), mRNA.					
Homo sapiens	Unigene	Hs.560542	ILMN_114312	HS.560542	Hs.560542		Hs.560542		10908199	AV750351			ILMN_1885367	0001580605	S	342	ATAGAGCACTTCCCGTGAATGGAGCTTGCGGGACTGGAGTCGCTTGTGGG	17	-	53095-53104:53106-53145		AV750351 NPC Homo sapiens cDNA clone NPCBHE04 5, mRNA sequence					
Homo sapiens	RefSeq	NM_199344.2	ILMN_356604	SFT2D2	NM_199344.2	NM_199344.2		375035	170784805	NM_199344.2	SFT2D2	NP_955376.1	ILMN_3307659	0004830437	S	552	GGCCAGTTTTATGAAGCTTTGGAAGGCACTATGGACAGAAGCTGGTGGAC	1	+	168211784-168211833	1q24.2a	Homo sapiens SFT2 domain containing 2 (SFT2D2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]			
Homo sapiens	RefSeq	XM_937347.1	ILMN_46059	LOC648289	XM_937347.1	XM_937347.1		648289	89026312	XM_937347.1	LOC648289	XP_942440.1	ILMN_1796956	0006860021	S	65	CCATCGACCGTCCAAGTGCTGAGGAGCGAGGGCACACGGCATGGGACTAG					PREDICTED: Homo sapiens hypothetical protein LOC648289 (LOC648289), mRNA.					
Homo sapiens	Unigene	Hs.540569	ILMN_105231	HS.540569	Hs.540569		Hs.540569		11086624	BF197499			ILMN_1878350	0004200373	S	335	ATGATCCCAACCCTTCTGAACCCATCATCTTTACTGGTGGCTGAGCTGGC	16	-	46302197-46302246		7o83e07.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:3643092 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020859.3	ILMN_365788	SHROOM3	NM_020859.3	NM_020859.3		57619	203098097	NM_020859.3	SHROOM3	NP_065910.3	ILMN_3245062	0006280400	S	10732	CTCAAAGTGTGGTCAGGATACGATCTGCATCAGAATCCTTGGAATGCTTG	4	+	77704118-77704167	4q21.1b	Homo sapiens shroom family member 3 (SHROOM3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence ISS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A cell junction at which the cytoplasmic face of the plasma membrane is attached to actin filaments [goid 5912] [evidence ISS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence ISS]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence ISS]	The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence ISS]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence ISS]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The aggregation of coloring matter in a particular location in a cell, occurring in response to some external stimulus [goid 43482] [evidence ISS]; Any process by which a protein is transported to, or maintained in, apical regions of the cell [goid 45176] [evidence ISS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_001007551.2	ILMN_23506	CT45A5	NM_001007551.2	NM_001007551.2		441521	61657911	NM_001007551.2	CT45A5	NP_001007552.1	ILMN_1670627	0001690717	S	544	GCAATTTCTCTGGAGATGACCTAGAATGCAGAGGAATAGCCTCCTCTCCC	X	-	134947976-134948025	Xq26.3b	Homo sapiens cancer/testis antigen family 45, member A5 (CT45A5), mRNA.					
Homo sapiens	RefSeq	NM_000322.2	ILMN_16113	PRPH2	NM_000322.3	NM_000322.3		5961	118572595	NM_000322.3	PRPH2	NP_000313.2	ILMN_1807610	0004590669	S	2707	TCCCCCAAGCAGAAGACCAGATCCAAGATGTTTGGACACCCTGTCAGACG	6	-	42772532-42772581	6p21.1e	Homo sapiens peripherin 2 (retinal degeneration, slow) (PRPH2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1749427] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 1749427] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TSPAN22; PRPH; AVMD; AOFMD; rd2; RP7; RDS	TSPAN22; PRPH; AVMD; AOFMD; RP7; PRPH2
Homo sapiens	RefSeq	XM_001718072.1	ILMN_349917	LOC100127899	XM_001718072.1	XM_001718072.1		100127899	169171184	XM_001718072.1	LOC100127899	XP_001718124.1	ILMN_3193736	0006290576	A	397	ATCGCTCAGGGCCTCCCTCAGGCGTGCCGGGTCCTCGGGATGCAGCCAGT	7	+	100328151-100328200	7q22.1c	PREDICTED: Homo sapiens hypothetical protein LOC100127899 (LOC100127899), mRNA.					
Homo sapiens	RefSeq	NM_057095.1	ILMN_8736	CYP3A43	NM_057095.1	NM_057095.1		64816	16933532	NM_057095.1	CYP3A43	NP_476436.1	ILMN_2377288	0007150121	A	1268	CCCAAAGGGTTAGCAGTGATGGTTCCAATCTATGCTCTTCACCATGACCC	7	+	99297310-99297359	7q22.1b	Homo sapiens cytochrome P450, family 3, subfamily A, polypeptide 43 (CYP3A43), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	MGC119315; MGC119316	MGC119315; MGC119316
Homo sapiens	RefSeq	NM_006285.2	ILMN_5444	TESK1	NM_006285.2	NM_006285.2		7016	66932998	NM_006285.2	TESK1	NP_006276.2	ILMN_1791067	0004860315	S	2224	AGCCCGTGGTCTCAGGCCTCCAACTTTGGCCTTCAGGACACCCTGTAAGA	9	+	35599746-35599795	9p13.3b-p13.3a	Homo sapiens testis-specific kinase 1 (TESK1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8537404] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8537404] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12027893] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]		
Homo sapiens	RefSeq	XM_942519.1	ILMN_40282	LOC652833	XM_942519.1	XM_942519.1		652833	89064853	XM_942519.1	LOC652833	XP_947612.1	ILMN_1696397	0003370524	S	217	GAGGAGCAGATGAGGGCGAAATATCTGGAGAATCTGGCACAGGAGAATGC					PREDICTED: Homo sapiens similar to hydrocephalus inducing (LOC652833), mRNA.					
Homo sapiens	RefSeq	XM_001723250.1	ILMN_338827	LOC100129478	XM_001723250.1	XM_001723250.1		100129478	169210595	XM_001723250.1	LOC100129478	XP_001723302.1	ILMN_3257429	0006420187	M	867	CAGAAAAGGCACGTTTCCTTAAAACGTGGCGGGACCTATGGAAAGAAGGC				16p13.3f	PREDICTED: Homo sapiens hypothetical protein LOC100129478 (LOC100129478), mRNA.					
Homo sapiens	RefSeq	XM_001723250.1	ILMN_338827	LOC100129478	XM_001723250.1	XM_001723250.1		100129478	169210595	XM_001723250.1	LOC100129478	XP_001723302.1	ILMN_3180960	0001410220	A	546	AATAAATAGGGTGTCCGTTGGGCTGCTCGGGTCGGATTCCGCGGTGCCAG				16p13.3f	PREDICTED: Homo sapiens hypothetical protein LOC100129478 (LOC100129478), mRNA.					
Homo sapiens	Unigene	Hs.292031	ILMN_85046	HS.292031	Hs.292031		Hs.292031		27880916	BX117351			ILMN_1853505	0005490575	S	108	CTGTGGCTCCCTTCTTTGTGCTCTTAAAAAGGCCGACATCTGGCTAGTCT	3	+	107071531-107071580		BX117351 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998C073966, mRNA sequence					
Homo sapiens	Unigene	Hs.544430	ILMN_107845	HS.544430	Hs.544430		Hs.544430		2737616	AA721481			ILMN_1908998	0001690136	S	212	CACCAGACAACAACCTTCCTCTTCTTCCAACCAAGTTCAGGATGTGAGGT	6	+	127749100-127749149		nz74g05.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:1301240 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002591.2	ILMN_29456	PCK1	NM_002591.2	NM_002591.2		5105	32483400	NM_002591.2	PCK1	NP_002582.2	ILMN_1731948	0000070681	S	1838	CCCAAGGAGGATGCCCTGAACCTGAAAGGCCTGGGGCACATCAACATGAT	20	+	55574072-55574121	20q13.31a	Homo sapiens phosphoenolpyruvate carboxykinase 1 (soluble) (PCK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11851336] [evidence EXP]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [pmid 14764811] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence ISS]; The chemical reactions and pathways resulting in the formation of glycerol, 1,2,3-propanetriol, from other compounds, including pyruvate [goid 46327] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 11851336] [evidence IDA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [evidence IEA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [pmid 11851336] [evidence EXP]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 11851336] [evidence IDA]; Interacting selectively with a carboxylic acid, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 31406] [pmid 11851336] [evidence IDA]	PEPCKC; PEPCK1; PEPCK-C; MGC22652	PEPCKC; PEPCK1; PEPCK-C; MGC22652
Homo sapiens	RefSeq	NM_002591.2	ILMN_29456	PCK1	NM_002591.2	NM_002591.2		5105	32483400	NM_002591.2	PCK1	NP_002582.2	ILMN_2197381	0006270364	S	2205	CACTGGGTAGTAGCTAATGAAATTGAGAAGGGAAATCTTAGCATGCCTCC	20	+	55574439-55574488	20q13.31a	Homo sapiens phosphoenolpyruvate carboxykinase 1 (soluble) (PCK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11851336] [evidence EXP]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [pmid 14764811] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence ISS]; The chemical reactions and pathways resulting in the formation of glycerol, 1,2,3-propanetriol, from other compounds, including pyruvate [goid 46327] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 11851336] [evidence IDA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [evidence IEA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [pmid 11851336] [evidence EXP]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 11851336] [evidence IDA]; Interacting selectively with a carboxylic acid, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 31406] [pmid 11851336] [evidence IDA]	PEPCKC; PEPCK1; PEPCK-C; MGC22652	PEPCKC; PEPCK1; PEPCK-C; MGC22652
Homo sapiens	Unigene	Hs.440518	ILMN_92257	HS.440518	Hs.440518		Hs.440518		38149201	CF887340			ILMN_1836550	0003520021	S	243	GGACATGTGCCTTTAGTGTGAAGAAAGACCCCAACTCTCCAACGGACGCC	6	-	83128892-83128941		UI-CF-FN0-afs-l-17-18-UI.r18 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-afs-l-17-18-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_015701.2	ILMN_22881	C2ORF30	NM_015701.2	NM_015701.2		27248	20070263	NM_015701.2	C2orf30	NP_056516.2	ILMN_1724376	0004920274	S	2093	ACTAGAAACTGGGCACATGGTAGAGGCTCACATGGGAGTTGTCCTCACCC	2	+	53899120-53899169	2p16.2a	Homo sapiens chromosome 2 open reading frame 30 (C2orf30), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CL24936; CL25084; XTP3TPB	CL24936; CL25084; XTP3TPB
Homo sapiens	RefSeq	XR_001063.1	ILMN_34691	LOC401354	XR_001063.1	XR_001063.1		401354	89024940	XR_001063.1	LOC401354		ILMN_1672445	0006770010	A	705	AGACGCGTCCAGCGGCCAGGCGGGGACAGTGCCGTTCTAGAGGTCCTTGA	7	-	62496645-62496694		PREDICTED: Homo sapiens hypothetical gene supported by BC040831, transcript variant 1 (LOC401354), misc RNA.					
Homo sapiens	RefSeq	XR_016945.2	ILMN_164832	LOC389141	XR_016945.2	XR_016945.2		389141	169165148	XR_016945.2	LOC389141		ILMN_3276990	0005900373	M	527	CTTTGTGGACATTGCCATCCCATGCAACAACAAGGGAGCTCACTGAGTGG	3	-	111884196-111884245	3q13.13c	PREDICTED: Homo sapiens misc_RNA (LOC389141), miscRNA.					
Homo sapiens	RefSeq	NM_021932.4	ILMN_27128	RIC8A	NM_021932.4	NM_021932.4		60626	27883865	NM_021932.4	RIC8A	NP_068751.4	ILMN_1770733	0006860373	S	2338	GCCAGTGTGTTGGGGTATGTGCTGCACTTCCCAGGGAGAAAACCTGTCAG	11	+	204749-204798	11p15.5d	Homo sapiens resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) (RIC8A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	synembryn; MGC131931; MGC148073; MGC148074; RIC8; MGC104517	synembryn; MGC131931; MGC148073; MGC148074; RIC8; MGC104517
Homo sapiens	RefSeq	XM_374766.2	ILMN_43512	LOC399715	XM_374766.2	XM_374766.2		399715	89030791	XM_374766.2	LOC399715	XP_374766.2	ILMN_1797954	0003800072	I	64	CTCCACCGTCTGGTGCCACAGCCTGAGGTGATGAAAATCCTTGCAGATGC	10	+	6389656-6389705	10p15.1a	PREDICTED: Homo sapiens FLJ46311 protein (LOC399715), mRNA.					
Homo sapiens	RefSeq	XM_374766.2	ILMN_43512	LOC399715	XM_374766.2	XM_374766.2		399715	89030791	XM_374766.2	LOC399715	XP_374766.2	ILMN_1744832	0002650445	A	275	GCACAGGGCTCTGGCCTTGGAGAAGGGATTTCCAGTTACCGCAGTGTCAC	10	+	6409950-6409999	10p15.1a	PREDICTED: Homo sapiens FLJ46311 protein (LOC399715), mRNA.					
Homo sapiens	RefSeq	NM_001017405.1	ILMN_165937	LOC730744	XM_001129080.1	XM_001129080.1		730744	113415930	XM_001129080.1	LOC730744	XP_001129080.1	ILMN_1747771	0006220327	A	680	CGTAGCTGCGTCGTTTCGATATCACACCCTCTGTGTGCCGCCTTACTTCC					PREDICTED: Homo sapiens similar to macrophage erythroblast attacher (LOC730744), mRNA.					EMLP; HLC-10; EMP; PIG5
Homo sapiens	RefSeq	NM_001001480.2	ILMN_176093	KRTAP5-5	NM_001001480.2	NM_001001480.2		439915	122891873	NM_001001480.2	KRTAP5-5	NP_001001480.2	ILMN_2159203	0005290377	S	607	AGCCCTACTGCTGCCAGTCCAGCTGCTGTAAGCCCTGTAGCTGCTTCTCA	11	+	1608215-1608264	11p15.5b	Homo sapiens keratin associated protein 5-5 (KRTAP5-5), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	KRTAP5.5; KRTAP5-11	KRTAP5.5; KRTAP5-11
Homo sapiens	RefSeq	NM_001009997.1	ILMN_12537	C10ORF62	NM_001009997.1	NM_001009997.1		414157	58036494	NM_001009997.1	C10orf62	NP_001009997.1	ILMN_1720898	0006560364	S	1082	ACAGCGCAGGTGAGATAGACCCTGAGGCCCCTGAAGACCCACCAAGAGAA	10	+	99340555-99340604	10q24.1b	Homo sapiens chromosome 10 open reading frame 62 (C10orf62), mRNA.				bA548K23.1	bA548K23.1
Homo sapiens	RefSeq	NM_024884.1	ILMN_21427	L2HGDH	NM_024884.1	NM_024884.1		79944	13376330	NM_024884.1	L2HGDH	NP_079160.1	ILMN_1723211	0007040433	S	1913	CACAAAGTTAGCTGGGTCTGGTGCCTCTGTGGTTCCAGCTCCTCAGTAGG	14	-	49783034-49783083	14q22.1b	Homo sapiens L-2-hydroxyglutarate dehydrogenase (L2HGDH), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16005139] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 16005139] [evidence IDA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the mitochondrial inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 31305] [pmid 16005139] [evidence NAS]	The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification [goid 44267] [pmid 16005139] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-2-hydroxyglutarate + acceptor = 2-oxoglutarate + reduced acceptor [goid 47545] [pmid 16005139] [evidence IDA]	FLJ12618; C14orf160	FLJ12618; C14orf160
Homo sapiens	RefSeq	XM_944392.1	ILMN_44689	LOC650862	XM_944392.1	XM_944392.1		650862	89039332	XM_944392.1	LOC650862	XP_949485.1	ILMN_1695697	0002680292	S	1	ATGAATGTTCCCCGTCTGTTTAACTGTTACGGCCGCAGTGTGTGGGCCGC					PREDICTED: Homo sapiens hypothetical protein LOC650862 (LOC650862), mRNA.					
Homo sapiens	RefSeq	NM_053042.2	ILMN_178450	ZNF518B	NM_053042.2	NM_053042.2		85460	58761534	NM_053042.2	ZNF518B	NP_444270.2	ILMN_1682449	0001050132	S	6578	CCCAGTCGAGAACATCTTGTAAGCCTTCATTAAGGGCCACCTGCTGTCTG	4	-	10441812-10441861	4p16.1b	Homo sapiens zinc finger protein 518B (ZNF518B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		KIAA1729
Homo sapiens	RefSeq	XR_000217.3	ILMN_36936	LOC648253	XR_000217.3	XR_000217.3		648253	89057612	XR_000217.3	LOC648253		ILMN_1786831	0007210445	S	70	AACCTTACAAATGCAGTGACTGTGGCAAGAGTTCACACTGGAGAGAGACC					PREDICTED: Homo sapiens similar to Zinc finger protein Kr18 (HKr18) (LOC648253), mRNA.					
Homo sapiens	RefSeq	XR_039172.1	ILMN_346904	LOC729212	XR_039172.1	XR_039172.1		729212	169215773	XR_039172.1	LOC729212		ILMN_3227046	0001980612	A	497	CGAAGATGGCAGAGGGGCAGGTCCCGGTGCTCAATGGTCAAAGCTATCTC				22q12.2b	PREDICTED: Homo sapiens misc_RNA (LOC729212), miscRNA.					
Homo sapiens	RefSeq	XM_926814.1	ILMN_168116	LOC728153	XM_001128002.1	XM_001128002.1		728153	113416551	XM_001128002.1	LOC728153	XP_001128002.1	ILMN_1771048	0000580703	A	200	TATAAGATATTAAAGGGTAAGTCTCTCCGGCCCGGTTTCCCTCGGTGTGC	5	+	60706623-60706672	5q12.1b	PREDICTED: Homo sapiens similar to FAM133B protein, transcript variant 1 (LOC728153), mRNA.					
Homo sapiens	RefSeq	XM_929313.1	ILMN_35792	LOC653733	XM_929313.1	XM_929313.1		653733	88942864	XM_929313.1	LOC653733	XP_934406.1	ILMN_1715376	0006060110	S	61	GATGAAATTGTGGATGAAAAATTGGATACCAGTTTTAGGATATCAGTTTT	1	-	74280141-74280190		PREDICTED: Homo sapiens similar to leucine rich repeat containing 44 (LOC653733), mRNA.					
Homo sapiens	RefSeq	NM_002019.2	ILMN_26448	FLT1	NM_002019.2	NM_002019.2		2321	32306519	NM_002019.2	FLT1	NP_002010.1	ILMN_1752307	0003130047	S	5279	GCAGTCCTGAGGAGAGTTTTCTCCATATCAAAACGAGGGCTGATGGAGGA	13	-	27774244-27774293	13q12.2b-q12.3a	Homo sapiens fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) (FLT1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8248162] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11278319] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8248162] [evidence TAS]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 2158038] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 10194760] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10748050] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [pmid 1312256] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 8248162] [evidence TAS]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [pmid 10748050] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [pmid 1312256] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	VEGFR1; FLT	VEGFR1; FLT
Homo sapiens	RefSeq	NM_032860.3	ILMN_20725	LTV1	NM_032860.3	NM_032860.3		84946	34147695	NM_032860.3	LTV1	NP_116249.2	ILMN_1805658	0001230296	S	1529	GCTATAGACAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTC	6	+	144184658-144184664:144184665-144184707	6q24.2b	Homo sapiens LTV1 homolog (S. cerevisiae) (LTV1), mRNA.				dJ468K18.4; C6orf93; FLJ14909	dJ468K18.4; C6orf93; FLJ14909
Homo sapiens	RefSeq	XR_037301.1	ILMN_344448	LOC646127	XR_037301.1	XR_037301.1		646127	169217125	XR_037301.1	LOC646127		ILMN_3286655	0007160209	M	3810	ACAGACGTGAGGGAATGGCCTGAGCCAGAAATGCCTCGGTTTGGAACGGG				Xq13.3a	PREDICTED: Homo sapiens misc_RNA (LOC646127), miscRNA.					
Homo sapiens	RefSeq	NM_023110.1	ILMN_9730	FGFR1	NM_023106.2	NM_023106.2		2260	105990516	NM_023106.2	FGFR1	NP_075594.1	ILMN_1796229	0006770128	A	844	CGCCGAGCGAGGGTCAGTTTGAAAAGGAGGATCGAGCTCACTGTGGAGTA	8	-	38434170-38434209:38444656-38444665	8p12a	Homo sapiens fibroblast growth factor receptor 1 (FGFR1), transcript variant 4, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16597617] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9139660] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17086194] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10918587] [evidence TAS]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 10748122] [evidence TAS]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 7874169] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 1846977] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 2159626] [evidence NAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 2159626] [evidence NAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17086194] [evidence EXP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 2167437] [evidence TAS]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 2159626] [evidence NAS]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 1846977] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9660748] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8753773] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CEK; N-SAM; FLT2; BFGFR; FLG; KAL2; HBGFR; CD331; FGFBR	CEK; N-SAM; H5; FLT2; BFGFR; FLG; H3; KAL2; H2; CD331; H4; C-FGR
Homo sapiens	Unigene	Hs.473191	ILMN_95224	HS.473191	Hs.473191		Hs.473191		21750193	AK091747			ILMN_1856315	0002370168	S	1973	TGGTGAGATCCTTCTCCTACATGAGGCCAGTCTGACAAGTCTGGGAGAGG					Homo sapiens cDNA FLJ34428 fis, clone HLUNG2000761					
Homo sapiens	RefSeq	NM_145312.2	ILMN_17191	ZNF485	NM_145312.2	NM_145312.2		220992	34147721	NM_145312.2	ZNF485	NP_660355.1	ILMN_2186626	0004210687	S	1735	GAGGTGGAGCTGTAAATACTGTACAAAGCCAGGCATGGTGGCATATGCCT	10	+	43433041-43433090	10q11.21b	Homo sapiens zinc finger protein 485 (ZNF485), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_145312.2	ILMN_17191	ZNF485	NM_145312.2	NM_145312.2		220992	34147721	NM_145312.2	ZNF485	NP_660355.1	ILMN_1664034	0000670279	S	1361	CCTTTCGGCACAGCTCAGGCCTTGTTGAACATCAGAGACTCCATACTGGG	10	+	43432667-43432716	10q11.21b	Homo sapiens zinc finger protein 485 (ZNF485), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_030908.1	ILMN_164037	OR2A4	NM_030908.1	NM_030908.1		79541	13929211	NM_030908.1	OR2A4	NP_112170.1	ILMN_3240793	0005390278	S	26	GAGAGTTCCTCCTACTGGGATTTCCCGTTGGCCCAAGGATTCAGATGCTC	6	-	132064159-132064208	6q23.2a	Homo sapiens olfactory receptor, family 2, subfamily A, member 4 (OR2A4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2A10	OR2A10
Homo sapiens	Unigene	Hs.545299	ILMN_108539	HS.545299	Hs.545299		Hs.545299		2577246	AA649918			ILMN_1867211	0005290152	S	262	TGGAGACACTGGCATCACTGTCGTTCTTGGCTCAGAGGAGCAGCCAGGGA	8	-	102496871-102496920		ns54g01.s1 NCI_CGAP_Pr22 Homo sapiens cDNA clone IMAGE:1187472 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038060.1	ILMN_334042	LOC100133855	XR_038060.1	XR_038060.1		100133855	169184182	XR_038060.1	LOC100133855		ILMN_3234959	0004760414	S	78	TCTGTGATGCCATAGCAGGGGCGCCTTCTGAAAGCCCTCTGGATTGAGGC					PREDICTED: Homo sapiens misc_RNA (LOC100133855), miscRNA.					
Homo sapiens	RefSeq	XM_936267.1	ILMN_169979	CEP170L	NR_003135.1	NR_003135.1		645455	112734796	NR_003135.1	CEP170L		ILMN_1668290	0003710452	I	15691	CCAGAACTGGAGGAATTAAGTACAGGCACCTGGGCTCAGTATGGAAGACT				4q26f	Homo sapiens centrosomal protein 170kDa-like (CEP170L) on chromosome 4.				KIAA0470L; KIAA0470; MGC26143; FAM68B	
Homo sapiens	RefSeq	XM_936247.1	ILMN_169979	CEP170L	NR_003135.1	NR_003135.1		645455	112734796	NR_003135.1	CEP170L		ILMN_1687168	0002450189	S	49697	GTATGACCTCAGCTCATGGCTCTGCTTCAGGTAAATTGGATCCAGATTTC				4q26f	Homo sapiens centrosomal protein 170kDa-like (CEP170L) on chromosome 4.				KIAA0470L; KIAA0470; MGC26143; FAM68B	
Homo sapiens	RefSeq	XM_942406.1	ILMN_169979	CEP170L	NR_003135.1	NR_003135.1		645455	112734796	NR_003135.1	CEP170L		ILMN_1677062	0001300450	S	22929	AAAGTGATGTTCCAGTGTACTTGAAAAGGTTGAAAGGTAAAGTGATTTGA				4q26f	Homo sapiens centrosomal protein 170kDa-like (CEP170L) on chromosome 4.				KIAA0470L; KIAA0470; MGC26143; FAM68B	
Homo sapiens	RefSeq	NM_015681.3	ILMN_9318	B9D1	NM_015681.3	NM_015681.3		27077	156564370	NM_015681.3	B9D1	NP_056496.1	ILMN_3239284	0006060594	S	590	CGAGTACACAGACCCCAAGGTGGTGGCTCAGGGTGAAGGCCGGGAAGTGA	17	-	19246771-19246774:19247103-19247148	17p11.2e	Homo sapiens B9 protein domain 1 (B9D1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	EPPB9; B9	B9
Homo sapiens	RefSeq	NM_006235.1	ILMN_162315	POU2AF1	NM_006235.1	NM_006235.1		5450	5453933	NM_006235.1	POU2AF1	NP_006226.1	ILMN_1811049	0002710452	S	2945	ATAAGCCACCATTCTGTGGAACCAAGGCCCCCTCCACGCAAACACCCTCC	11	-	110728486-110728535	11q23.1b	Homo sapiens POU class 2 associating factor 1 (POU2AF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7859290] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [pmid 7859290] [evidence TAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 7859290] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713566] [evidence IPI]	OBF1; OBF-1; OCAB; BOB1	OBF1; OBF-1; OCAB; BOB1
Homo sapiens	RefSeq	NM_007122.3	ILMN_20520	USF1	NM_207005.1	NM_207005.1		7391	46877101	NM_207005.1	USF1	NP_996888.1	ILMN_1777982	0006280333	A	1558	GAGGGAAGGATGTTTAGCAGTGGCTGGTGCCCATGAAGAGGAGATTGGCC	1	-	161009199-161009248	1q23.3a	Homo sapiens upstream transcription factor 1 (USF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter [goid 432] [pmid 7852331] [evidence IMP]; Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter [goid 432] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 12917334] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 2249772] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence ISS]; Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10552] [pmid 18234320] [evidence IMP]; Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10552] [pmid 8576131] [evidence IMP]; The last group of viral genes to be transcribed during the viral life cycle; genes consist mainly of those encoding structural proteins [goid 19086] [pmid 2249772] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [pmid 15054483] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of fibrinolysis, an ongoing process that solubilizes fibrin, resulting in the removal of small blood clots [goid 51918] [pmid 18234320] [evidence IC ]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 18234320] [evidence IMP]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 8576131] [evidence IMP]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 2249772] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 2249772] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8576131] [evidence IPI]; Interacting selectively with any of the basic Helix-Loop-Helix (bHLH) superfamily of transcription factors, important regulatory components in transciptional networks of many developmental pathways [goid 43425] [pmid 8576131] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 8576131] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 2249772] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 8576131] [evidence IPI]	HYPLIP1; FCHL1; MLTF; FCHL; UEF; MLTFI	HYPLIP1; FCHL1; MLTF; FCHL; UEF; MLTFI
Homo sapiens	RefSeq	NM_144578.2	ILMN_24999	C14ORF32	NM_144578.2	NM_144578.2		93487	34147697	NM_144578.2	C14orf32	NP_653179.1	ILMN_1779279	0000110328	S	2445	ACCCCTGGATAAAGGCACTTTCACTGCCTGTCACTGATCAGCAGATACTG	14	+	54605582-54605631	14q22.3a	Homo sapiens chromosome 14 open reading frame 32 (C14orf32), mRNA.				MGC23138; MISS; c14_5346	MGC23138; MISS; c14_5346
Homo sapiens	RefSeq	NM_006517.2	ILMN_20945	SLC16A2	NM_006517.2	NM_006517.2		6567	62821799	NM_006517.2	SLC16A2	NP_006508.1	ILMN_1703886	0002650112	S	3962	CCTGCTTCCATTTCTCCCCACCTCACTCTCACCAAGTCACCAGAGGGTGG	X	+	73670067-73670116	Xq13.2c	Homo sapiens solute carrier family 16, member 2 (monocarboxylic acid transporter 8) (SLC16A2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9425115] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9425115] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7981683] [evidence TAS]; The directed movement of monocarboxylic acids into, out of, within or between cells [goid 15718] [pmid 9425115] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 7981683] [evidence TAS]; Catalysis of the transfer of monocarboxylic acids from one side of the membrane to the other. A monocarboxylic acid is an organic acid with one COOH group [goid 8028] [pmid 9425115] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	DXS128E; DXS128; MCT8; AHDS; XPCT; MCT7	DXS128E; DXS128; MCT8; AHDS; XPCT; MCT7
Homo sapiens	RefSeq	NM_032014.1	ILMN_17184	MRPS24	NM_032014.2	NM_032014.2		64951	117940051	NM_032014.2	MRPS24	NP_114403.1	ILMN_1802553	0002680767	S	372	GCTGGTTTTAAAGCGCCGGGGTAACCAGTTGGAGATCTGTGCCGTGGTCC	7	-	43906431-43906480	7p13e	Homo sapiens mitochondrial ribosomal protein S24 (MRPS24), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence ISS]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [pmid 10938081] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence ISS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence ISS]	MRP-S24; HSPC335	MRP-S24; HSPC335
Homo sapiens	RefSeq	NM_198560.1	ILMN_29175	LOC375323	NM_198560.1	NM_198560.1		375323	38348397	NM_198560.1	LOC375323	NP_940962.1	ILMN_1794162	0004290253	S	1119	GACCCTGATCTCAGACTTACTTCTCACCGACTACCCTGCAAGCTCCAGGC	3	-	9518756-9518805	3p25.3c	Homo sapiens lipoma HMGIC fusion partner-like protein 4 (LOC375323), mRNA.					
Homo sapiens	RefSeq	NM_002917.1	ILMN_29866	RFNG	NM_002917.1	NM_002917.1		5986	74271815	NM_002917.1	RFNG	NP_002908.1	ILMN_2304996	0002480152	A	1374	AAGGAGCAGGCTCCAGGCCAAGGTCCTGGCCCAGCCACGGCCATTGCAAG	17	-	80006182-80006231	17q25.3g	Homo sapiens RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (RFNG), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10341080] [evidence NAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10341080] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: transfers a beta-D-GlcNAc residue from UDP-D-GlcNAc to the fucose residue of a fucosylated protein acceptor [goid 33829] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]		
Homo sapiens	RefSeq	XM_928982.1	ILMN_34835	LOC646019	XM_928982.2	XM_928982.2		646019	113416895	XM_928982.2	LOC646019	XP_934075.1	ILMN_1690704	0002140050	S	247	CGGCTACGAGCCATGCCAGCCGCCTGTGGCAGACGCTGCAGCAGTTTTGG	5	-	179038678-179038727	5q35.3e	PREDICTED: Homo sapiens similar to Protein Chibby (PKD2 interactor, Golgi and endoplasmic reticulum associated 1) (PIGEA-14) (Cytosolic leucine-rich protein) (LOC646019), mRNA.					
Homo sapiens	RefSeq	NR_002918.1	ILMN_32490	SNORA48	NR_002918.1	NR_002918.1		652965	86604712	NR_002918.1	SNORA48		ILMN_3235264	0003360703	S	1	TGTCCCTGACCTGGGTAGAGTGGCATCTGGTTGGTGATGCCCATCTCATA	17	+	7418755-7418804	17p13.1d	Homo sapiens small nucleolar RNA, H/ACA box 48 (SNORA48), small nucleolar RNA.				ACA48	ACA48
Homo sapiens	RefSeq	XM_001124749.2	ILMN_176545	LOC730415	XM_001124749.2	XM_001124749.2		730415	169168615	XM_001124749.2	LOC730415	XP_001124749.1	ILMN_3233753	0000510201	I	1484	AAAAACTGAGAACAGACTGTAACAACTGAAACAAACTGGGCAAACATGAG					PREDICTED: Homo sapiens hypothetical LOC730415 (LOC730415), mRNA.					
Homo sapiens	RefSeq	NR_029888.1	ILMN_388258	MIR342	NR_029888.1	NR_029888.1		442909	262206331	NR_029888.1	MIR342		ILMN_3310301	0000430634	S	2	AACTGGGCTCAAGGTGAGGGGTGCTATCTGTGATTGAGGGACATGGTTAA				14q32.2b	Homo sapiens microRNA 342 (MIR342), microRNA.					
Homo sapiens	RefSeq	XM_945742.2	ILMN_33892	LOC440335	XM_945742.2	XM_945742.2		440335	113426311	XM_945742.2	LOC440335	XP_950835.1	ILMN_3284429	0005220148	M	235	CCCGCAGGGAAAGCCCCAGGAAGGAAAGACCCAAGGGAGTGGATAACTTG				16p13.3b	PREDICTED: Homo sapiens hypothetical gene supported by BC022385; BC035868; BC048326, transcript variant 4 (LOC440335), mRNA.					
Homo sapiens	Unigene	Hs.521794	ILMN_99996	HS.521794	Hs.521794		Hs.521794		7040837	AW470731			ILMN_1832334	0003840681	S	23	TTTCTGTCTCAGGCAACAGTCCAGGGTGGGCCATCAGGCAGTGCTCCACA	8	+	124058468-124058517		ha32c07.x1 NCI_CGAP_Kid12 Homo sapiens cDNA clone IMAGE:2875404 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001717266.1	ILMN_340854	LOC100129619	XM_001717266.1	XM_001717266.1		100129619	169171404	XM_001717266.1	LOC100129619	XP_001717318.1	ILMN_3259899	0003710279	M	1055	TCAGGGACCACGGGACACACGAAGGAAGAGGAGCAGTTTCGCCATTGCCA				7p13b	PREDICTED: Homo sapiens hypothetical protein LOC100129619 (LOC100129619), mRNA.					
Homo sapiens	RefSeq	XM_927670.1	ILMN_43209	LOC644548	XM_927670.1	XM_927670.1		644548	88974671	XM_927670.1	LOC644548	XP_932763.1	ILMN_1678942	0004890458	S	237	GGTAAACACACCCAGACAATGGGCAGTGCAGGCTCAGAAACTGATGAAAT	4	+	63365489-63365538	4q13.1d	PREDICTED: Homo sapiens similar to LOC531907 protein (LOC644548), mRNA.					
Homo sapiens	RefSeq	NM_021979.2	ILMN_940	HSPA2	NM_021979.2	NM_021979.2		3306	13676856	NM_021979.2	HSPA2	NP_068814.2	ILMN_2153916	0006270274	S	2069	TGTCCTTGTGCCAAGTACGAGATCTATTGTTGGAAGTCTTTGGTATATGC	14	+	64079313-64079362	14q23.3a	Homo sapiens heat shock 70kDa protein 2 (HSPA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 7829106] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [pmid 8622925] [evidence TAS]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [pmid 8622925] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 3037489] [evidence TAS]		
Homo sapiens	RefSeq	XM_001714239.1	ILMN_341120	LOC644518	XM_001714239.1	XM_001714239.1		644518	169217065	XM_001714239.1	LOC644518	XP_001714291.1	ILMN_3206565	0000290564	A	127	GAGCCTAGTGTGCCAGAGCCTCAACAAGAAGAACCACCAGCTGAAAGTCA				Xp11.22b	PREDICTED: Homo sapiens similar to XAGE-5 protein (LOC644518), mRNA.					
Homo sapiens	Unigene	Hs.525400	ILMN_100648	HS.525400	Hs.525400		Hs.525400		4686834	AI635504			ILMN_1825360	0007210324	S	303	ATTGGTGGCAAAGGTCACTCCTTAACAGATGCTAGTGTGAGGTGGGGCCC					ts95a01.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2238984 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006715.2	ILMN_685	MAN2C1	NM_006715.2	NM_006715.2		4123	46852163	NM_006715.2	MAN2C1	NP_006706.2	ILMN_2111739	0000150241	S	2859	TTTTCCGTGTCTTCACCCGCGGTCGTATTGGAGACCGTCAAGCAGGCGGA	15	-	75648555-75648560:75648642-75648685	15q24.2a	Homo sapiens mannosidase, alpha, class 2C, member 1 (MAN2C1), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MAN6A8; DKFZp686E23167; MANA1; MANA; MGC87979	MAN6A8; DKFZp686E23167; MANA1; MANA; MGC87979
Homo sapiens	RefSeq	NM_001006933.1	ILMN_29324	TCEAL3	NM_032926.2	NM_032926.2		85012	31543154	NM_032926.2	TCEAL3	NP_116315.1	ILMN_1749478	0000730739	A	883	GATGAGAATATTGCTGGCCCTGCTTTCCCTGGTAGGTATTTGCCAGGCCC	X	+	102751281-102751330	Xq22.2a	Homo sapiens transcription elongation factor A (SII)-like 3 (TCEAL3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		MGC15737	MGC15737
Homo sapiens	Unigene	Hs.572538	ILMN_124719	HS.572538	Hs.572538		Hs.572538		34454217	CF454561			ILMN_1886769	0003400301	S	179	CCTTTGGTCAGTGCTGGTTAGGGTTTCTTGGTGGACACTCTGCAGCATCC					AGENCOURT_15364206 Human Anterior Horn Homo sapiens cDNA clone IMAGE:30513831 5, mRNA sequence					
Homo sapiens	RefSeq	XM_942393.1	ILMN_33222	LOC652760	XM_942393.1	XM_942393.1		652760	89077312	XM_942393.1	LOC652760	XP_947486.1	ILMN_1784979	0003520348	S	796	CTCTGGGACAGGGAGCCAGGAGAGGGGCGGACCTCCTACTACTTCTGTTT					PREDICTED: Homo sapiens similar to Sodium- and chloride-dependent creatine transporter 1 (CT1) (Creatine transporter 1) (Solute carrier family 6 member 8) (LOC652760), mRNA.					
Homo sapiens	RefSeq	NM_002742.1	ILMN_12145	PRKD1	NM_002742.2	NM_002742.2		5587	115529462	NM_002742.2	PRKD1	NP_002733.2	ILMN_1785891	0001070184	S	3492	AGACAATGCACCTAGCTGTGCAAGACCTAGTGCTCTTAAGCCTAAATGCC	14	-	30045822-30045871	14q12d	Homo sapiens protein kinase D1 (PRKD1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10856238] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8119958] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10856238] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8119958] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8119958] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8119958] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4700] [pmid 8119958] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12893243] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PKD; PKCM; PKC-MU; PRKCM	PKD; PKCM; PKC-MU; PRKCM
Homo sapiens	RefSeq	XM_931349.1	ILMN_39630	LOC642756	XM_931349.1	XM_931349.1		642756	89038184	XM_931349.1	LOC642756	XP_936442.1	ILMN_1668976	0000870278	S	181	GGTTCCCAGGTGCCAATGAACAGAGAAATAGCCAAAGGGCTCGCTGAGTG	15	-	30745940-30745981:30748493-30748500		PREDICTED: Homo sapiens hypothetical protein LOC642756 (LOC642756), mRNA.					
Homo sapiens	RefSeq	XM_942065.1	ILMN_37777	LOC647275	XM_930335.1	XM_930335.1		647275	88953269	XM_930335.1	LOC647275	XP_935428.1	ILMN_1668317	0007570543	S	61	GCAGCTGGAGGGCTCAACCCCAAGTCTGAGGTTGGAAGGATCATGCTTCT	2	-	76339136-76339185	2p12h	PREDICTED: Homo sapiens similar to Purine nucleoside phosphorylase (Inosine phosphorylase) (PNP) (LOC647275), mRNA.					
Homo sapiens	RefSeq	NR_030311.1	ILMN_388032	MIR585	NR_030311.1	NR_030311.1		693170	262205895	NR_030311.1	MIR585		ILMN_3310538	0004900368	S	44	GAGAAAGCCTGAACGTTGGGCGTATCTGTATGCTAGGGCTGCTGTAACAA				5q35.1b	Homo sapiens microRNA 585 (MIR585), microRNA.					
Homo sapiens	RefSeq	NM_003770.4	ILMN_183918	KRT37	NM_003770.4	NM_003770.4		8688	55770881	NM_003770.4	KRT37	NP_003761.3	ILMN_1740813	0005810255	S	1399	TCTGAAGGCCCGAGTTAGGAGATTGAGGCTGGTTGCACTGGGGTCAGGAG	17	-	39577078-39577127	17q21.2b	Homo sapiens keratin 37 (KRT37), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9756910] [evidence TAS]	KRTHA7; hHa7; HA7	KRTHA7; hHa7; HA7
Homo sapiens	RefSeq	NM_178826.2	ILMN_173162	ANO4	NM_178826.2	NM_178826.2		121601	31341259	NM_178826.2	ANO4	NP_849148.1	ILMN_2228215	0006220440	S	3483	CAGACACTGGGCTAAAAAGGGTATTCAGACACATGGACACACATTCCTAG	12	+	100046124-100046173	12q23.1d-q23.2a	Homo sapiens anoctamin 4 (ANO4), mRNA.				MGC130026; FLJ34272; FLJ35277; FLJ34221	MGC130026; FLJ34272; FLJ35277; FLJ34221
Homo sapiens	RefSeq	NM_004771.3	ILMN_176781	MMP20	NM_004771.3	NM_004771.3		9313	45359864	NM_004771.3	MMP20	NP_004762.2	ILMN_2178116	0002940326	S	1521	GGATCTTAAGGACTAAAGCAGAATGTAGGAGAGGGATTCTTCCAAAGGCC	11	-	102447951-102448000	11q22.2a-q22.2b	Homo sapiens matrix metallopeptidase 20 (MMP20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9398237] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9398237] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 9398237] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9398237] [evidence TAS]	MMP-20	MMP-20
Homo sapiens	RefSeq	NM_004771.3	ILMN_176781	MMP20	NM_004771.3	NM_004771.3		9313	45359864	NM_004771.3	MMP20	NP_004762.2	ILMN_1803714	0002480390	S	1202	GCTGTCTACCTCAGGGAGCCACAGAAGACCCTTTTCTTTGTGGGAGATGA	11	-	102464178-102464227	11q22.2a-q22.2b	Homo sapiens matrix metallopeptidase 20 (MMP20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9398237] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9398237] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 9398237] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9398237] [evidence TAS]	MMP-20	MMP-20
Homo sapiens	RefSeq	NM_153694.3	ILMN_19847	SYCP3	NM_153694.3	NM_153694.3		50511	50345249	NM_153694.3	SYCP3	NP_710161.1	ILMN_2123521	0007570632	S	169	GGGAAGCCGTCTGTGGAAGATCAGTTTACGAGAGCCTATGACTTTGAGAC	12	-	102131627-102131676	12q23.2a	Homo sapiens synaptonemal complex protein 3 (SYCP3), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IEA]; A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them [goid 802] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The first division of meiosis in which homologous chromosomes are paired and segregated from each other, occurring in the constitutive absence of chiasmata [goid 705] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a female [goid 7066] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IEA]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [pmid 15218256] [evidence NAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The replacement of somatic histones within sperm chromatin with sperm-specific histones or protamines with unique DNA-binding properties, resulting in condensation of the sperm chromatin [goid 35093] [pmid 14643120] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SCP3; MGC71888; COR1	SCP3; MGC71888; COR1
Homo sapiens	RefSeq	NM_153694.3	ILMN_19847	SYCP3	NM_153694.3	NM_153694.3		50511	50345249	NM_153694.3	SYCP3	NP_710161.1	ILMN_2123525	0005960025	S	777	TATGATGGAAACTCAGCAGCAAGAGATAGCAAGTGTTCGGAAGTCTCTTC	12	-	102122721-102122758:102122887-102122898	12q23.2a	Homo sapiens synaptonemal complex protein 3 (SYCP3), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; A proteinaceous core found between sister chromatids during meiotic prophase [goid 800] [evidence IEA]; A structural unit of the synaptonemal complex that spans the regions between the lateral elements and connects them [goid 802] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The first division of meiosis in which homologous chromosomes are paired and segregated from each other, occurring in the constitutive absence of chiasmata [goid 705] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a female [goid 7066] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IEA]; Progression through male meiosis I, the first meiotic division in the male germline [goid 7141] [pmid 15218256] [evidence NAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The replacement of somatic histones within sperm chromatin with sperm-specific histones or protamines with unique DNA-binding properties, resulting in condensation of the sperm chromatin [goid 35093] [pmid 14643120] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SCP3; MGC71888; COR1	SCP3; MGC71888; COR1
Homo sapiens	RefSeq	NM_001404.4	ILMN_29675	EEF1G	NM_001404.4	NM_001404.4		1937	83656774	NM_001404.4	EEF1G	NP_001395.1	ILMN_2262288	0004560719	I	739	CCCAGTTCCGGGCTGTCTTGGGCGAAGTGAAACTGTGTGAGAAGATGGCC	11	-	62334880-62334929	11q12.3a	Homo sapiens eukaryotic translation elongation factor 1 gamma (EEF1G), mRNA. XM_935976 XM_935977 XM_935978 XM_935979	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10368288] [evidence EXP]; A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence NAS]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10908348] [evidence IPI]	EF1G; GIG35	EF1G; GIG35
Homo sapiens	RefSeq	XM_927934.1	ILMN_19024	CYS1	NM_001037160.1	NM_001037160.1		192668	81158079	NM_001037160.1	CYS1	NP_001032237.1	ILMN_1747783	0001430743	S	380	CGACGGCAGGGACGAGACGCTGCGCCTGCTGGACGAGCTGCTGGCCGAGT	2	-	10137560-10137609	2p25.1d	Homo sapiens cystin 1 (CYS1), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IEA]; The bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35085] [evidence IEA]			FLJ33980	
Homo sapiens	RefSeq	NM_001037160.1	ILMN_19024	CYS1	NM_001037160.1	NM_001037160.1		192668	81158079	NM_001037160.1	CYS1	NP_001032237.1	ILMN_2223313	0004390148	S	603	ATCTCCTACGACCACTCGGAAGAGGGGCTGATGGCGAGCATCGAGCGGGA	2	-	10116443-10116492	2p25.1d	Homo sapiens cystin 1 (CYS1), mRNA.	A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence IEA]; The bundle of microtubules and associated proteins that forms the core of cilia in eukaryotic cells and is responsible for their movements [goid 35085] [evidence IEA]			FLJ33980	FLJ33980
Homo sapiens	RefSeq	NM_014483.2	ILMN_16189	RBMS3	NM_014483.2	NM_014483.2		27303	51317350	NM_014483.2	RBMS3	NP_055298.2	ILMN_1702681	0006620240	I	1494	GTCTGGGCTGTGCTAAGCTCTTTTCCTCAAGATCAGCCATCTTGACATCA	3	+	29779482-29779484:29781211-29781257	3p24.1b-p24.1a	Homo sapiens RNA binding motif, single stranded interacting protein (RBMS3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	NM_144695.1	ILMN_11942	C1ORF58	NM_144695.2	NM_144695.2		148362	124244087	NM_144695.2	C1orf58	NP_653296.2	ILMN_1654864	0004390014	S	1404	ACAGAAGCCCCACAGCTGGAACTCAAAGCAAATTATGGTCTCGTAGAGCC	1	+	220971341-220971390	1q41e	Homo sapiens chromosome 1 open reading frame 58 (C1orf58), mRNA.				FLJ32421; MGC142197; MGC142195; RP11-452F19.1; Brox	FLJ32421; RP11-452F19.1
Homo sapiens	RefSeq	NM_014942.2	ILMN_4620	ANKRD6	NM_014942.2	NM_014942.2		22881	55742856	NM_014942.2	ANKRD6	NP_055757.2	ILMN_2178587	0004880465	S	2890	CACACCTGCTGTGCCTAGACAAGTGTCTTTCTGTAAGAGCTGTAACTCTG	6	+	90397859-90397908	6q15c-q15d	Homo sapiens ankyrin repeat domain 6 (ANKRD6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17592114] [evidence IPI]		
Homo sapiens	RefSeq	XM_942902.1	ILMN_34630	KIAA0251	XM_942902.1	XM_942902.1		23042	89040681	XM_942902.1	KIAA0251	XP_947995.1	ILMN_1705063	0007650463	I	112	TTCCCTCAGTGCTGTGTTACTAGCTCTTCTGGGCCCCAGGTGAGAACCTT				16p13.11b	PREDICTED: Homo sapiens KIAA0251 protein, transcript variant 3 (KIAA0251), mRNA.					
Homo sapiens	RefSeq	NM_001024843.1	ILMN_901	TNRC6B	NM_001024843.1	NM_001024843.1		23112	67782329	NM_001024843.1	TNRC6B	NP_001020014.1	ILMN_1771201	0003180368	I	900	AATGGTACTTCCGCTTGGGGTGAGCCAAATGAAAGCAGTCCTGGGTGGGG	22	+	38996104-38996153	22q13.1e	Homo sapiens trinucleotide repeat containing 6B (TNRC6B), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KIAA1093	KIAA1093
Homo sapiens	Unigene	Hs.212830	ILMN_82334	HS.212830	Hs.212830		Hs.212830		23659272	BU732904			ILMN_1824858	0006550433	S	481	CTCTGGGTCCCCCTTGGTACTGTGAACCCCAGGGCTGTAACTCTAATGGG	1	+	108478644-108478693		UI-E-CK1-aga-k-23-0-UI.s1 UI-E-CK1 Homo sapiens cDNA clone UI-E-CK1-aga-k-23-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038604.1	ILMN_346041	LOC646030	XR_038604.1	XR_038604.1		646030	169211752	XR_038604.1	LOC646030		ILMN_3288461	0005700288	M	1197	GTTCACCTTCAGACAAGGGTCAGGCTCAGCTTTCACACCTGACCGAAGCC				17q11.2c	PREDICTED: Homo sapiens misc_RNA (LOC646030), miscRNA.					
Homo sapiens	RefSeq	XR_038604.1	ILMN_346041	LOC646030	XR_038604.1	XR_038604.1		646030	169211752	XR_038604.1	LOC646030		ILMN_3211963	0001110070	A	1334	GCTCAGCCTCTAGACCCGGGGCTTGCCATAACTCCAGAACCTACTACAGA				17q11.2c	PREDICTED: Homo sapiens misc_RNA (LOC646030), miscRNA.					
Homo sapiens	RefSeq	XM_936293.1	ILMN_38031	LOC642147	XM_936293.1	XM_936293.1		642147	88981613	XM_936293.1	LOC642147	XP_941386.1	ILMN_1786892	0006350524	S	172	CCGCAGCCCTCTAGCCCTGAGTTCATGCAGAAGGACAATTTCTACAACGG					PREDICTED: Homo sapiens similar to Y46G5A.1a (LOC642147), mRNA.					
Homo sapiens	RefSeq	NM_025224.2	ILMN_12382	ZBTB46	NM_025224.2	NM_025224.2		140685	52317160	NM_025224.2	ZBTB46	NP_079500.1	ILMN_1710092	0007040521	S	4218	AGTTTGCCGACTGAAGAGTGTGGGATTTCCGAGGCCCAGGTGAGCACGTC	20	-	62375986-62376035	20q13.33e	Homo sapiens zinc finger and BTB domain containing 46 (ZBTB46), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BTBD4; ZNF340; FLJ13502; RINZF; dJ583P15.8; dJ583P15.7	BTBD4; ZNF340; FLJ13502; RINZF; dJ583P15.8; dJ583P15.7
Homo sapiens	RefSeq	NR_003222.1	ILMN_173439	SNORD114-29	NR_003222.1	NR_003222.1		767610	115392030	NR_003222.1	SNORD114-29		ILMN_3308375	0003060468	S	5	CGATGATGACTACTGGTAGCATGAGTCATATACAGTGAATACATGTCTGG	14	+	100526185-100526234	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 114-29 (SNORD114-29), small nucleolar RNA.				14q(II-29)	14q(II-29)
Homo sapiens	RefSeq	NM_003264.3	ILMN_23642	TLR2	NM_003264.3	NM_003264.3		7097	68160956	NM_003264.3	TLR2	NP_003255.2	ILMN_1772387	0006420750	S	3246	GCCACAAAAGGCATTCTCTGTCCTACCTAGCTGTCACTTCTCTGTGCAGC	4	+	154627086-154627135	4q31.3d	Homo sapiens toll-like receptor 2 (TLR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16024789] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14625308] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9435236] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9435236] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]	A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octomer oligosaccharide [goid 2238] [evidence IEA]; Any series of molecular signals generated as a consequence of binding to a cell surface pattern recognition receptor (PRR). Such receptors bind for molecular patterns based on a repeating or polymeric structures, like those of polysaccharides or peptidoglycans, which are sometimes associated with potential pathogens [goid 2752] [evidence IEA]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10426996] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11044375] [evidence TAS]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IEA]; The directed movement of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, into, out of, within or between cells [goid 42892] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with lipopolysaccharide to initiate a change in cell activity [goid 1875] [pmid 11518816] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10854325] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15657077] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively, in a non-covalent manner, with peptidoglycan, any of a class of glycoconjugates found in bacterial cell walls [goid 42834] [pmid 11986301] [evidence IDA]; Interacting selectively with any part of a Gram-positive bacterial cell [goid 51076] [pmid 11521063] [evidence IDA]	CD282; TIL4	CD282; TIL4
Homo sapiens	RefSeq	NM_006712.3	ILMN_11299	FASTK	NM_006712.3	NM_006712.3		10922	39995105	NM_006712.3	FASTK	NP_006703.1	ILMN_1691861	0002450390	I	544	ACTGCCCCTCCTTTGACATTCACACCATCCACGTGTGTCTGCACCTTGCA	7	-	150776596-150776645	7q36.1d	Homo sapiens Fas-activated serine/threonine kinase (FASTK), transcript variant 1, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7544399] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7544399] [evidence TAS]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 7544399] [evidence TAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein [goid 33867] [evidence IEA]	FAST	FAST
Homo sapiens	RefSeq	XM_001723289.1	ILMN_339266	C10ORF105	XM_001723289.1	XM_001723289.1		414152	169184512	XM_001723289.1	C10orf105	XP_001723341.1	ILMN_3181538	0000360470	A	4629	GAGCAAAAAGCCAACTGCTGTCAGGGACTGGCGGGTATAGCACCTGGGTC				10q22.1d	PREDICTED: Homo sapiens chromosome 10 open reading frame 105 (C10orf105), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_000754.2	ILMN_26337	COMT	NM_007310.1	NM_007310.1		1312	6466449	NM_007310.1	COMT	NP_009294.1	ILMN_1730084	0006940243	A	855	ACGTGCTCCTGCTGACCTTCTGCGGCTCCGGGCTGTGTCCTAAATGCAAA	22	+	18336318-18336367	22q11.21c	Homo sapiens catechol-O-methyltransferase (COMT), transcript variant S-COMT, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1707278] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 1707278] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8968737] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42420] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the reaction: S-adenosyl-L-methionine + a catechol = S-adenosyl-L-homocysteine + a guaiacol [goid 16206] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + a catechol = S-adenosyl-L-homocysteine + a guaiacol [goid 16206] [pmid 8968737] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_153360.1	ILMN_29515	APCDD1L	NM_153360.1	NM_153360.1		164284	23503290	NM_153360.1	APCDD1L	NP_699191.1	ILMN_1689431	0000130138	S	3028	AGGGAAGCCCTTTTCCTCCCTGAGACTGTGTGGGGTTCAGTCAGCCTGCT	20	-	57034460-57034509	20q13.32a	Homo sapiens adenomatosis polyposis coli down-regulated 1-like (APCDD1L), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP4-685L9.2; FLJ90166; MGC126807; MGC126809	RP4-685L9.2; FLJ90166; MGC126807; MGC126809
Homo sapiens	RefSeq	NM_032350.3	ILMN_22349	C7ORF50	NM_032350.4	NM_032350.4		84310	142377640	NM_032350.4	C7orf50	NP_115726.1	ILMN_1718336	0005810671	S	2018	TGGTGGGAGCTTGTGGAGTCGGATCACGTACCTGTGCAGAAACCGCCTCT	7	-	1003189-1003238	7p22.3c-p22.3b	Homo sapiens chromosome 7 open reading frame 50 (C7orf50), mRNA.				MGC11257; YCR016W	
Homo sapiens	RefSeq	NM_174951.2	ILMN_881	FAM9A	NM_174951.2	NM_174951.2		171482	31343340	NM_174951.2	FAM9A	NP_777611.1	ILMN_1778039	0000580458	S	1129	TCGTGTCAGAACTCTTTTGGAAGAGTTGGCACTTCATTGTCTCTTCAACC	X	-	8759176-8759213:8759321-8759332	Xp22.31b	Homo sapiens family with sequence similarity 9, member A (FAM9A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC138227; MGC142009	MGC138227; MGC142009
Homo sapiens	RefSeq	NM_001017535.1	ILMN_163855	VDR	NM_001017535.1	NM_001017535.1		7421	63054844	NM_001017535.1	VDR	NP_001017535.1	ILMN_1666203	0004880070	I	113	GACTCTAGCCTCCTCTGATAGCCTCATGCCAGGCCCCGTGCACATTGCTT	12	-	48293656-48293705	12q13.11c	Homo sapiens vitamin D (1,25- dihydroxyvitamin D3) receptor (VDR), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2849209] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11891224] [evidence IDA]; Any process by which nutrients are taken up from the contents of the intestine [goid 50892] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10866662] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Combining with vitamin D3, cholecalciferol, to initiate a change in cell activity [goid 8434] [pmid 9070272] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR1I1	NR1I1
Homo sapiens	RefSeq	NM_020139.3	ILMN_179992	BDH2	NM_020139.3	NM_020139.3		56898	66933013	NM_020139.3	BDH2	NP_064524.3	ILMN_1673360	0004230398	S	2650	CACTACCGAATTATGGCTAACTTTGGTTTGTGATCTAGACCAAGTCACCC	4	-	104218451-104218500	4q24b	Homo sapiens 3-hydroxybutyrate dehydrogenase, type 2 (BDH2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16380372] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16380372] [evidence IDA]	The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [pmid 16380372] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [pmid 16380372] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [pmid 16380372] [evidence IDA]	UCPA-OR; DHRS6; FLJ13261; EFA6R; PRO20933; UNQ6308	DHRS6; FLJ13261; PRO20933; UCPA-OR; EFA6R; UNQ6308
Homo sapiens	RefSeq	XM_926359.1	ILMN_43921	LOC653105	XM_926359.1	XM_926359.1		653105	88944402	XM_926359.1	LOC653105	XP_931452.1	ILMN_1693886	0003190414	I	93	ACTGACTTGCCCGCGTGTGTCTGAACCGCCTTCACAGGGAGGCAACTTTT	1	+	29040-29089		PREDICTED: Homo sapiens similar to Proline-rich nuclear receptor coactivator 2, transcript variant 1 (LOC653105), mRNA.					
Homo sapiens	RefSeq	XM_926359.1	ILMN_43921	LOC653105	XM_926359.1	XM_926359.1		653105	88944402	XM_926359.1	LOC653105	XP_931452.1	ILMN_1796808	0003610471	A	2394	TAAAAATGTGTTTTACTTGTCACTGACTTGAAGCTCATAATACACTCACA	1	+	33315-33364		PREDICTED: Homo sapiens similar to Proline-rich nuclear receptor coactivator 2, transcript variant 1 (LOC653105), mRNA.					
Homo sapiens	RefSeq	NM_152287.2	ILMN_17632	ZNF276	NM_152287.2	NM_152287.2		92822	40805101	NM_152287.2	ZNF276	NP_689500.2	ILMN_1721339	0003190138	S	3223	GGCAACTCTGGACATCTCTGCCTATTATCAGTGCTGGGGACACCCCTGGG	16	+	88333486-88333535	16q24.3b	Homo sapiens zinc finger protein 276 (ZNF276), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC111410; MGC45417; ZFP276; ZNF477; MGC126480	MGC111410; MGC45417; ZFP276; ZNF477; MGC126480
Homo sapiens	RefSeq	NM_001296.3	ILMN_11666	CCBP2	NM_001296.3	NM_001296.3		1238	37577160	NM_001296.3	CCBP2	NP_001287.2	ILMN_1763127	0000460504	S	2858	ACTTTCTATATGCGGCCGGAACAGGGTGGTTGACATCAGTTTTCTTCAGG	3	+	42883689-42883738	3p22.1a	Homo sapiens chemokine binding protein 2 (CCBP2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9364936] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9364936] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 9364936] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9364936] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9364936] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9364936] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	D6; CCR9; MGC138250; MGC126678; CCR10; hD6; CMKBR9	D6; CCR9; MGC138250; MGC126678; CCR10; hD6; CMKBR9
Homo sapiens	RefSeq	NM_012294.3	ILMN_181175	RAPGEF5	NM_012294.3	NM_012294.3		9771	119392076	NM_012294.3	RAPGEF5	NP_036426.3	ILMN_3236825	0000020148	S	6264	GAGAACCCGCCATCAGGGTGTCTACCTAACTTCTCAGGGACTACACTTGG	7	-	22159856-22159905	7p15.3c	Homo sapiens Rap guanine nucleotide exchange factor (GEF) 5 (RAPGEF5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10486569] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10486569] [evidence NAS]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rap family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 17034] [pmid 10486569] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [pmid 10934204] [evidence IPI]	REPAC; KIAA0277; MR-GEF; GFR	REPAC; KIAA0277; MR-GEF; GFR
Homo sapiens	RefSeq	XM_001718580.1	ILMN_344763	LOC730144	XM_001718580.1	XM_001718580.1		730144	169162427	XM_001718580.1	LOC730144	XP_001718632.1	ILMN_3302615	0004180682	M	29	TTCACTGGACCATGGAACGCTTTCATCTTGCTGCCGTTTCCACCGAGGAA				1q25.3c	PREDICTED: Homo sapiens similar to translation initiation factor Eif1 (LOC730144), mRNA.					
Homo sapiens	RefSeq	NM_004472.1	ILMN_182299	FOXD1	NM_004472.2	NM_004472.2		2297	89903020	NM_004472.2	FOXD1	NP_004463.1	ILMN_1704418	0003870500	S	1838	CGCCCTGTCCAGGCACTAGAGGCTCCCTTGACGTTTGGCAGATGAAAAAC	5	-	72778221-72778270	5q13.2c	Homo sapiens forkhead box D1 (FOXD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7957066] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8702877] [evidence TAS]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [pmid 7957066] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 7957066] [evidence IDA]	FREAC4; FKHL8	FREAC4; FKHL8
Homo sapiens	RefSeq	NM_001124759.1	ILMN_356749	FRG2C	NM_001124759.1	NM_001124759.1		100288801	185136048	NM_001124759.1	FRG2C	NP_001118231.1	ILMN_3243065	0001240168	S	1443	GGTTGGCCTCGGACTCAAGTGATCCACCAGCCTCCACCTCCCGACGTGGT	Un|NT_167216.1	-	86999-87048		Homo sapiens FSHD region gene 2 family, member C (FRG2C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	RefSeq	XM_927975.1	ILMN_164283	MEIG1	NM_001080836.1	NM_001080836.1		644890	124249369	NM_001080836.1	MEIG1	NP_001074305.1	ILMN_1708907	0002140626	S	452	CACCTTGTCCTGTTCTAAGAACTGGCTGCAGATGCATTAAAGTTGTACTT				10p13c	Homo sapiens meiosis expressed gene 1 homolog (mouse) (MEIG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	bA2K17.3	
Homo sapiens	RefSeq	NM_001080836.1	ILMN_164283	MEIG1	NM_001080836.1	NM_001080836.1		644890	124249369	NM_001080836.1	MEIG1	NP_001074305.1	ILMN_2153825	0001070520	S	168	GGTAGATCGTTGGCCGGAGACAGGATATGTGAAGAAACTTCAGAGAAGGG				10p13c	Homo sapiens meiosis expressed gene 1 homolog (mouse) (MEIG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	bA2K17.3	bA2K17.3
Homo sapiens	RefSeq	XM_925969.1	ILMN_44616	LOC647337	XM_936403.1	XM_936403.1		647337	89028809	XM_936403.1	LOC647337	XP_941496.1	ILMN_1685672	0005870026	S	1	ATGACGGTGAGGCTTCTGCTGAATTCAGTCACCAGGGCTAGGAACCAACT					PREDICTED: Homo sapiens similar to mitochondrial isoleucine tRNA synthetase (LOC647337), mRNA.					
Homo sapiens	Unigene	Hs.582114	ILMN_134295	HS.582114	Hs.582114		Hs.582114		30052057	CB858008			ILMN_1881075	0001260706	S	94	TGGGGGCAAACAGGACAGCAATTACCCTCACGCCATCTTACAGACCAGGA					NISC_na12a03.y1 COGENE 8.5 EAT Homo sapiens cDNA clone IMAGE:5794469 5, mRNA sequence					
Homo sapiens	RefSeq	NM_033402.3	ILMN_15234	LRRCC1	NM_033402.3	NM_033402.3		85444	117414161	NM_033402.3	LRRCC1	NP_208325.3	ILMN_2281881	0006020465	I	285	CTCTTCATGCCGTCAATCTTCATTGCAATAACATCTCCAAGATCGAAGCC	8	+	86021856-86021905	8q21.2b	Homo sapiens leucine rich repeat and coiled-coil domain containing 1 (LRRCC1), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SAP2; KIAA1764	SAP2; KIAA1764
Homo sapiens	RefSeq	NM_033402.2	ILMN_15234	LRRCC1	NM_033402.3	NM_033402.3		85444	117414161	NM_033402.3	LRRCC1	NP_208325.3	ILMN_1799999	0001500093	S	3059	GAAGCTCATCAAGCTGAAATAGCACAGCTGGCCAATGAAAAGCAGAAGTG	8	+	86053681-86053730	8q21.2b	Homo sapiens leucine rich repeat and coiled-coil domain containing 1 (LRRCC1), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SAP2; KIAA1764	SAP2; KIAA1764
Homo sapiens	RefSeq	NM_033402.3	ILMN_15234	LRRCC1	NM_033402.3	NM_033402.3		85444	117414161	NM_033402.3	LRRCC1	NP_208325.3	ILMN_2384807	0001500681	A	2459	TGGGGACATGAGCTGGCACAACAAGGATCTTCTCTAGCCCAAAATCGTGG	8	+	86048174-86048198:86049699-86049723	8q21.2b	Homo sapiens leucine rich repeat and coiled-coil domain containing 1 (LRRCC1), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SAP2; KIAA1764	SAP2; KIAA1764
Homo sapiens	RefSeq	NM_148975.1	ILMN_21717	MS4A4A	NM_024021.2	NM_024021.2		51338	20070327	NM_024021.2	MS4A4A	NP_076926.2	ILMN_1741712	0004010750	A	1261	AAAGTGCTTTTTCCTTCAGGAAGTGGAGATGCATGGCCATCTCCCCCTCC	11	+	59832682-59832731	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 4 (MS4A4A), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC22311; 4SPAN1; MS4A4; MS4A7; HDCME31P; CD20-L1; CD20L1	MGC22311; 4SPAN1; MS4A4; MS4A7; HDCME31P; CD20-L1; CD20L1
Homo sapiens	RefSeq	NM_024021.2	ILMN_21717	MS4A4A	NM_024021.2	NM_024021.2		51338	20070327	NM_024021.2	MS4A4A	NP_076926.2	ILMN_1711550	0005490400	I	64	TGGAACAACTTAAATAAGTCAAATATACTTGGAGCTTTAAAAATTAAAAG	11	+	59806725-59806774	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 4 (MS4A4A), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC22311; 4SPAN1; MS4A4; MS4A7; HDCME31P; CD20-L1; CD20L1	MGC22311; 4SPAN1; MS4A4; MS4A7; HDCME31P; CD20-L1; CD20L1
Homo sapiens	RefSeq	NM_177534.1	ILMN_28965	SULT1A1	NM_177534.1	NM_177534.1		6817	29540538	NM_177534.1	SULT1A1	NP_803878.1	ILMN_1716367	0000050519	I	373	CCCTAGGCCTCAGTGACTTCCCTGAAAGCAAGAATTCCACTTTCTTGCTG	16	-	28620227-28620276	16p11.2e	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 (SULT1A1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9308] [pmid 8661000] [evidence TAS]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC5163; MGC131921; TSPST1; STP; PST; HAST1/HAST2; P-PST; ST1A3; STP1	MGC5163; MGC131921; TSPST1; STP; PST; HAST1/HAST2; P-PST; ST1A3; STP1
Homo sapiens	RefSeq	NM_172028.1	ILMN_28914	ABTB1	NM_172028.1	NM_172028.1		80325	25777625	NM_172028.1	ABTB1	NP_742025.1	ILMN_2367165	0006620609	A	1453	TCGAGGACCTGCTCGTGTCCATCGGTCTGGACTGTTGAGCCCCTGGCTGG	3	+	127399281-127399318:127399319-127399330	3q21.3b	Homo sapiens ankyrin repeat and BTB (POZ) domain containing 1 (ABTB1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BPOZ; PP2259; EF1ABP; MGC20585	BPOZ; PP2259; EF1ABP; MGC20585
Homo sapiens	Unigene	Hs.120364	ILMN_75636	HS.120364	Hs.120364		Hs.120364		34191447	BC035185			ILMN_1880905	0003850564	S	1359	GCCTATGTGCACGACTCAGCAGCCTGGACAGCTAATACCAAGGAACACGT	3	+	117918180-117918229		Homo sapiens hypothetical protein LOC285194, mRNA (cDNA clone IMAGE:5266409)					
Homo sapiens	RefSeq	XM_927139.1	ILMN_39993	LOC643869	XM_927139.1	XM_927139.1		643869	88963304	XM_927139.1	LOC643869	XP_932232.1	ILMN_1685263	0003370152	S	3	GTCTAACGCATTCAAGACCTCAGTGGAGGAAGCAGCTGCACATGTGGAAA	3	-	89136987-89137030:89147606-89147611		PREDICTED: Homo sapiens hypothetical protein LOC643869 (LOC643869), mRNA.					
Homo sapiens	Unigene	Hs.570636	ILMN_122817	HS.570636	Hs.570636		Hs.570636		10435278	AK023371			ILMN_1913537	0004230546	S	1947	CCCATCCTCCATGGCCCAGAGAGAAAACCCAGGACAAAACCTTGGAGAAG	3	+	63966686-63966735		Homo sapiens cDNA FLJ13309 fis, clone OVARC1001442					
Homo sapiens	RefSeq	NR_002157.1	ILMN_13155	OR2A9P	NR_002157.1	NR_002157.1		441295	49227711	NR_002157.1	OR2A9P		ILMN_2203544	0003610681	S	800	GAACTGCCAGCCTCAGTTGTCACGTGGACTCTTGATGCCCAATTATTGCC	7	+	143626647-143626696	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 9 pseudogene (OR2A9P), non-coding RNA.				OR2A9; OR2A19; HSDJ0798C17; FKSG35; OR2A22P	OR2A9; OR2A19; HSDJ0798C17; FKSG35; OR2A22P
Homo sapiens	RefSeq	NR_002157.1	ILMN_13155	OR2A9P	NR_002157.1	NR_002157.1		441295	49227711	NR_002157.1	OR2A9P		ILMN_2203549	0000020594	S	121	CCATCTCCTTTGCTGGCTGCATGACATAGACCTTTCTCTTTTTGAGTTTT	7	+	143625968-143626017	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 9 pseudogene (OR2A9P), non-coding RNA.				OR2A9; OR2A19; HSDJ0798C17; FKSG35; OR2A22P	OR2A9; OR2A19; HSDJ0798C17; FKSG35; OR2A22P
Homo sapiens	RefSeq	XR_037582.1	ILMN_335108	LOC100131940	XR_037582.1	XR_037582.1		100131940	169167050	XR_037582.1	LOC100131940		ILMN_3275696	0000360612	M	915	GGCCCGGTTAAAGAGCAAAGACGTCAAATTGGCTGAGGCACACCAGCAGG				4q21.1b	PREDICTED: Homo sapiens misc_RNA (LOC100131940), miscRNA.					
Homo sapiens	RefSeq	XM_928695.1	ILMN_32082	LOC645686	XM_928695.1	XM_928695.1		645686	89036635	XM_928695.1	LOC645686	XP_933788.1	ILMN_1671856	0000110563	S	847	AATATACCAGGAGCTGATGTGACAGGCCCAGATATGACCGCCCATGGAGC	13	-	18484951-18484991:18487671-18487679	13q12.11a	PREDICTED: Homo sapiens similar to general transcription factor II, i isoform 1 (LOC645686), mRNA.					
Homo sapiens	RefSeq	NM_013343.1	ILMN_5530	LOH3CR2A	NM_013343.1	NM_013343.1		29931	7106370	NM_013343.1	LOH3CR2A	NP_037475.1	ILMN_2052135	0006130148	S	1223	GCAATAGTGACATGAGCACTTGACTCGCTGGGTTATCAGGCTTTGGCTCC	3	+	8590113-8590162	3p26.1a	Homo sapiens loss of heterozygosity, 3, chromosomal region 2, gene A (LOH3CR2A), mRNA.				ERR-10; NAG-7; ERR10; NAG7	ERR-10; NAG-7; ERR10; NAG7
Homo sapiens	RefSeq	NM_148910.1	ILMN_42755	TIRAP	NM_148910.2	NM_148910.2		114609	89111123	NM_148910.2	TIRAP	NP_683708.1	ILMN_1812432	0000510451	I	1103	GCTACTACAGGAGGGAGAAGGGGAACGGGATTCAGCTACAGTATCTGATC	11	+	125668165-125668214	11q24.2c	Homo sapiens toll-interleukin 1 receptor (TIR) domain containing adaptor protein (TIRAP), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14625308] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12447442] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16024789] [evidence EXP]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12721283] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11544529] [evidence IPI]	FLJ42305; wyatt; Mal	FLJ42305; wyatt; Mal
Homo sapiens	RefSeq	NM_001024075.1	ILMN_27813	HNMT	NM_001024075.1	NM_001024075.1		3176	66932964	NM_001024075.1	HNMT	NP_001019246.1	ILMN_1713685	0007160689	I	548	GCGCTCTTCTGAGTTGCCATTTGGAGCTGCCCGTTTAGAAAGCAAATCTG	2	+	138455359-138455408	2q22.1b	Homo sapiens histamine N-methyltransferase (HNMT), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 7943261] [evidence TAS]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histamine = S-adenosyl-L-homocysteine + Nt-methylhistamine [goid 46539] [evidence IEA]	HMT; HNMT-S2; HNMT-S1	HMT; HNMT-S2; HNMT-S1
Homo sapiens	RefSeq	XM_942220.1	ILMN_36512	LOC652655	XM_942220.1	XM_942220.1		652655	89076436	XM_942220.1	LOC652655	XP_947313.1	ILMN_1779446	0004280079	S	25	TTAAGAGAATCACTGCAGGCCGGGCATGTCAAAGAAGATTGGAATGTCAG					PREDICTED: Homo sapiens similar to general transcription factor II, i isoform 1 (LOC652655), mRNA.					
Homo sapiens	RefSeq	NR_029705.1	ILMN_388693	MIR184	NR_029705.1	NR_029705.1		406960	262205421	NR_029705.1	MIR184		ILMN_3309934	0004880039	S	11	CCCTTATCACTTTTCCAGCCCAGCTTTGTGACTGTAAGTGTTGGACGGAG				15q25.1a	Homo sapiens microRNA 184 (MIR184), microRNA.					
Homo sapiens	RefSeq	NM_001131.2	ILMN_13546	CRISP1	NM_001131.2	NM_001131.2		167	25121981	NM_001131.2	CRISP1	NP_001122.2	ILMN_1732630	0002350136	A	1110	CAACAGTAACCTGGGCTAAAATAGGTCTTATGTGGTTCAACTCCCACCCC	6	-	49910657-49910706	6p12.3b	Homo sapiens cysteine-rich secretory protein 1 (CRISP1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8543280] [evidence TAS]	The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [pmid 8838800] [evidence TAS]		CRISP-1; HUMARP; AEGL1; HSCRISP1D; HSCRISP1G; ARP	HUMARP; AEGL1; HSCRISP1G; ARP; CRISP-1; HSCRISP1D
Homo sapiens	RefSeq	NM_182644.1	ILMN_10375	EPHA3	NM_182644.1	NM_182644.1		2042	32967313	NM_182644.1	EPHA3	NP_872585.1	ILMN_1782076	0000130537	A	1618	GCCCGAACAGCCGCTGGATATGGGACGAACAGCCGCAAGTTTGAGTTTGA	3	+	89531257-89531306	3p11.2a-p11.1b	Homo sapiens EPH receptor A3 (EPHA3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1737782] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1737782] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HEK4; ETK1; HEK; TYRO4; ETK	HEK4; ETK1; HEK; TYRO4; ETK
Homo sapiens	RefSeq	NM_182644.1	ILMN_10375	EPHA3	NM_182644.1	NM_182644.1		2042	32967313	NM_182644.1	EPHA3	NP_872585.1	ILMN_2286574	0000240301	I	2448	ACAGCAGAGCGATCTCGGCTCACTGCAAGCTCCTGCAAGCTCCGCCTCCT	3	+	89532087-89532136	3p11.2a-p11.1b	Homo sapiens EPH receptor A3 (EPHA3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1737782] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1737782] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HEK4; ETK1; HEK; TYRO4; ETK	HEK4; ETK1; HEK; TYRO4; ETK
Homo sapiens	RefSeq	NM_001008747.1	ILMN_169689	LOC441294	NM_001008747.1	NM_001008747.1		441294	56847633	NM_001008747.1	LOC441294	NP_001008747.1	ILMN_2231608	0003290156	S	2281	AACATCTACCCACCGAGGGGTTTACCTCCTTACTTTCACCCGAGACCTGG	7	+	142981292-142981341	7q35a	Homo sapiens similar to CTAGE6 (LOC441294), mRNA.					
Homo sapiens	RefSeq	NM_001008747.1	ILMN_169689	LOC441294	NM_001008747.1	NM_001008747.1		441294	56847633	NM_001008747.1	LOC441294	NP_001008747.1	ILMN_1764697	0005290725	S	4	CAGAGCAGCCTCGACGCTATGGAGGAGCCCGGTGCTACCCCTCAGCCCTA	7	+	142979015-142979032:142979033-142979064	7q35a	Homo sapiens similar to CTAGE6 (LOC441294), mRNA.					
Homo sapiens	RefSeq	NM_153034.2	ILMN_15343	ZNF488	NM_153034.2	NM_153034.2		118738	40255102	NM_153034.2	ZNF488	NP_694579.1	ILMN_3240605	0000430156	S	3207	GCTATGGTTCCACAGGGCTTCTTCTCGCAGGTCAGCTCCTTAGAGAGGTC	10	+	47993583-47993632	10q11.22b	Homo sapiens zinc finger protein 488 (ZNF488), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation [goid 48714] [evidence IEA]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation [goid 48714] [evidence IEA]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation [goid 48714] [evidence IEA]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation [goid 48714] [evidence IEA]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation [goid 48714] [evidence IEA]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation [goid 48714] [evidence IEA]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of oligodendrocyte differentiation [goid 48714] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]	FLJ32104	FLJ32104
Homo sapiens	RefSeq	XM_935773.1	ILMN_32073	LOC641994	XM_935773.1	XM_935773.1		641994	89026923	XM_935773.1	LOC641994	XP_940866.1	ILMN_1712289	0002900601	S	41	AGGCGTCCGGTGGCGTCAGCATGTTTGTGTGGAGGAATGTGGAACCTTGT					PREDICTED: Homo sapiens similar to capicua homolog (LOC641994), mRNA.					
Homo sapiens	RefSeq	NM_001032382.1	ILMN_24607	PQBP1	NM_001032382.1	NM_001032382.1		10084	74027252	NM_001032382.1	PQBP1	NP_001027554.1	ILMN_2325234	0003400196	A	584	ACCGGGGCCACGACAAGTCTGACAGGGATCGAGAGCGTGGCTATGACAAG	X	+	48644556-48644605	Xp11.23c	Homo sapiens polyglutamine binding protein 1 (PQBP1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10198427] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10198427] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9875212] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10198427] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NPW38; RENS1; SHS; MRXS3; MRXS8; MRX55	NPW38; RENS1; SHS; MRXS3; MRXS8; MRX55
Homo sapiens	RefSeq	NM_014805.2	ILMN_9770	EPM2AIP1	NM_014805.2	NM_014805.2		9852	31982934	NM_014805.2	EPM2AIP1	NP_055620.1	ILMN_1682658	0006770403	S	5243	GGTGCCCTTACTATCCATTCCCTATACACCCTGTTCTTTCCCAGACATAC	3	-	37004507-37004556	3p22.2b	Homo sapiens EPM2A (laforin) interacting protein 1 (EPM2AIP1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]			FLJ11207; KIAA0766	FLJ11207; KIAA0766
Homo sapiens	RefSeq	NM_014949.2	ILMN_6810	KIAA0907	NM_014949.2	NM_014949.2		22889	55741674	NM_014949.2	KIAA0907	NP_055764.2	ILMN_1670752	0002060482	S	2627	TCTCTCCCAGAACTGGTTGCAGCTAAAACAGAGAGATCTGACTGCTGGCT	1	-	155883104-155883153	1q22c	Homo sapiens KIAA0907 (KIAA0907), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]			RP11-336K24.1	RP11-336K24.1
Homo sapiens	RefSeq	NM_001446.3	ILMN_13498	FABP7	NM_001446.3	NM_001446.3		2173	36054052	NM_001446.3	FABP7	NP_001437.1	ILMN_1745299	0007040678	S	275	AAAGAGGGGAAAGGGCAAGGATGGTGGAGGCTTTCTGTGCTACCTGGAAG	6	+	123100920-123100939:123100940-123100969	6q22.31c	Homo sapiens fatty acid binding protein 7, brain (FABP7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9375786] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9250612] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [pmid 9375786] [evidence TAS]	B-FABP; MRG; BLBP; DKFZp547J2313; FABPB	B-FABP; BLBP; MRG; DKFZp547J2313; FABPB
Homo sapiens	RefSeq	NM_017599.2	ILMN_176962	VEZT	NM_017599.2	NM_017599.2		55591	19923537	NM_017599.2	VEZT	NP_060069.2	ILMN_2141398	0005550475	S	3545	AGCTAAGATGTGGATTTACAGGAAGAACCCTGGTTTGAATAACTGATCTG	12	+	94218682-94218731	12q22d	Homo sapiens vezatin, adherens junctions transmembrane protein (VEZT), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching [goid 43009] [evidence IEA]		DKFZp761C241; VEZATIN	DKFZp761C241; VEZATIN
Homo sapiens	Unigene	Hs.538217	ILMN_103781	HS.538217	Hs.538217		Hs.538217		5446294	AI825623			ILMN_1871229	0006180037	S	39	GCTGCTATGATGTTCCGCAGCTGAACCTCAATCACAGACAAACTAGTGCC	1	+	13084607-13084656		wb74f05.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2311425 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006654.3	ILMN_18281	FRS2	NM_006654.3	NM_006654.3		10818	110347407	NM_006654.3	FRS2	NP_006645.3	ILMN_2254562	0004890180	I	336	TCTACCATCATCAAGATCAAGCAGGCAAGTTTACTTGCTGTCATCTTCTG	12	+	68217977-68218026	12q15c	Homo sapiens fibroblast growth factor receptor substrate 2 (FRS2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9660748] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 9182757] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10629055] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 16284401] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7806500] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9660748] [evidence TAS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [pmid 9660748] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9660748] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9069267] [evidence EXP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 9660748] [evidence TAS]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Establishment and formation of the optic placode, paired ectodermal placodes that become invaginated to form the embryonic lens vesicles [goid 46619] [evidence IEA]	The binding activity of a molecule that brings together a transmembrane receptor protein kinase and one or more other molecules, permitting them to function in a coordinated way [goid 5068] [pmid 9660748] [evidence TAS];  [goid 5069] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9660748] [evidence IPI]; Inhibits signal transduction the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form [goid 16299] [pmid 9660748] [evidence TAS]; Increases the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19211] [pmid 9660748] [evidence TAS]	FRS2A; SNT-1; SNT; SNT1; FRS2alpha	FRS2A; SNT-1; SNT; SNT1; FRS2alpha
Homo sapiens	RefSeq	NM_006654.2	ILMN_18281	FRS2	NM_006654.3	NM_006654.3		10818	110347407	NM_006654.3	FRS2	NP_006645.3	ILMN_1703222	0002070482	S	1571	CTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGAAGATGAC	12	+	68254536-68254585	12q15c	Homo sapiens fibroblast growth factor receptor substrate 2 (FRS2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9660748] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 9182757] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10629055] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 16284401] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7806500] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9660748] [evidence TAS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [pmid 9660748] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9660748] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9069267] [evidence EXP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 9660748] [evidence TAS]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Establishment and formation of the optic placode, paired ectodermal placodes that become invaginated to form the embryonic lens vesicles [goid 46619] [evidence IEA]	The binding activity of a molecule that brings together a transmembrane receptor protein kinase and one or more other molecules, permitting them to function in a coordinated way [goid 5068] [pmid 9660748] [evidence TAS];  [goid 5069] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9660748] [evidence IPI]; Inhibits signal transduction the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form [goid 16299] [pmid 9660748] [evidence TAS]; Increases the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19211] [pmid 9660748] [evidence TAS]	FRS2A; SNT-1; SNT; SNT1; FRS2alpha	FRS2A; SNT-1; SNT; SNT1; FRS2alpha
Homo sapiens	RefSeq	NM_006654.3	ILMN_18281	FRS2	NM_006654.3	NM_006654.3		10818	110347407	NM_006654.3	FRS2	NP_006645.3	ILMN_2335893	0004060577	A	1867	CCAAAAACGCCTACAACTCCCCTTCCACAAACCCCTACCAGGCGCACAGA	12	+	68254832-68254881	12q15c	Homo sapiens fibroblast growth factor receptor substrate 2 (FRS2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9660748] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 9182757] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10629055] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 16284401] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7806500] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9660748] [evidence TAS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The close range interaction of two or more cells or tissues that causes them to change their fates and specify the development of an organ [goid 1759] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [pmid 9660748] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9660748] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9069267] [evidence EXP]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 9660748] [evidence TAS]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Establishment and formation of the optic placode, paired ectodermal placodes that become invaginated to form the embryonic lens vesicles [goid 46619] [evidence IEA]	The binding activity of a molecule that brings together a transmembrane receptor protein kinase and one or more other molecules, permitting them to function in a coordinated way [goid 5068] [pmid 9660748] [evidence TAS];  [goid 5069] [evidence IEA]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9660748] [evidence IPI]; Inhibits signal transduction the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form [goid 16299] [pmid 9660748] [evidence TAS]; Increases the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule [goid 19211] [pmid 9660748] [evidence TAS]	FRS2A; SNT-1; SNT; SNT1; FRS2alpha	FRS2A; SNT-1; SNT; SNT1; FRS2alpha
Homo sapiens	RefSeq	NM_013361.2	ILMN_166150	ZNF223	NM_013361.3	NM_013361.3		7766	142368963	NM_013361.3	ZNF223	NP_037493.2	ILMN_1815578	0007150711	S	2321	TGACCTATGGTAGTGCTACTGCACTCCAGCCAGGGCAACAGAGTGAGACC				19q13.31b	Homo sapiens zinc finger protein 223 (ZNF223), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NR_002832.1	ILMN_18615	BDNFOS	NR_002832.1	NR_002832.1		497258	84872122	NR_002832.1	BDNFOS		ILMN_3249533	0004760064	S	1658	CAGTGTTCCCACTGCAAACTACGGATGGGGTAAAAGACTGCTCACCTCCT	11	+	27654191-27654240	11p14.1d	Homo sapiens BDNF opposite strand (non-protein coding) (BDNFOS), non-coding RNA.				BT2C; BT2B; BT2D; BT2A	BT2C; BT2B; BT2D; BT2A
Homo sapiens	RefSeq	XM_926341.1	ILMN_43642	NKX1-1	XM_926341.1	XM_926341.1		54729	88972087	XM_926341.1	NKX1-1	XP_931434.1	ILMN_1739416	0003360435	I	456	AGATGGAGGGCGAACAAATCCGGCTGAGTGGAGGGGACCCTACGGACTCT	4	-	1388852-1388901	4p16.3c	PREDICTED: Homo sapiens HPX-153 homeobox (NKX1-1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	XM_933338.1	ILMN_30587	LOC653453	XM_933338.1	XM_933338.1		653453	89029353	XM_933338.1	LOC653453	XP_938431.1	ILMN_1704029	0003310221	A	824	GGCGCCCGCCAGTAACAAACATGGCTCCCTGAAGCCACTCAGGCTCAAGA	9	-	44342379-44342428	9p11.2c	PREDICTED: Homo sapiens similar to Keratinocyte growth factor precursor (KGF) (Fibroblast growth factor 7) (FGF-7) (HBGF-7), transcript variant 2 (LOC653453), mRNA.					
Homo sapiens	RefSeq	NM_001017992.2	ILMN_21631	ACTBL2	NM_001017992.2	NM_001017992.2		345651	144922730	NM_001017992.2	ACTBL2	NP_001017992.1	ILMN_3246895	0006100600	S	2129	TGTAGACCAGGATTACAGATACTTCTCTTGTGCAAGGATTTCACTGTGGG	5	-	56812215-56812264	5q11.2g	Homo sapiens actin, beta-like 2 (ACTBL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	ACT	
Homo sapiens	RefSeq	XM_927700.1	ILMN_163817	LOC644584	XR_019152.1	XR_019152.1		644584	113424845	XR_019152.1	LOC644584		ILMN_1679044	0002030619	S	577	TGCAGCCAGTCACTGCACCTCCGTCCTACCCTCCTACCAGCTATGATCAG				14q13.2b	PREDICTED: Homo sapiens misc_RNA (LOC644584), miscRNA.					
Homo sapiens	RefSeq	NM_000466.1	ILMN_5904	PEX1	NM_000466.1	NM_000466.1		5189	4505724	NM_000466.1	PEX1	NP_000457.1	ILMN_1748109	0000130647	S	3579	GCCTCCAGTGTTAAGGACAGCTTCACAAGAGGGTTGCCAAGAACTTACAC	7	-	91957031-91957080	7q21.2b	Homo sapiens peroxisome biogenesis factor 1 (PEX1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9588209] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 16854980] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [pmid 11439091] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16854980] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 9398847] [evidence IMP]; The microtubule-based process by which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 60152] [pmid 16449325] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16854980] [evidence IMP]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 16854980] [evidence IPI]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 16854980] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive some other reaction, for example ion transport across a membrane [goid 42623] [pmid 16854980] [evidence IMP]	ZWS1	ZWS1
Homo sapiens	RefSeq	XM_001713763.1	ILMN_348779	LOC100130525	XM_001713763.1	XM_001713763.1		100130525	169210441	XM_001713763.1	LOC100130525	XP_001713815.1	ILMN_3246590	0004060376	S	26	GAGGAGCCTCGGTGGGAAGAAGGGGCTTCTGGGTGGGGAGTGGGAGAGAG					PREDICTED: Homo sapiens hypothetical protein LOC100130525 (LOC100130525), mRNA.					
Homo sapiens	RefSeq	NM_001005282.1	ILMN_24192	OR5M8	NM_001005282.1	NM_001005282.1		219484	52627161	NM_001005282.1	OR5M8	NP_001005282.1	ILMN_1803873	0004730722	S	387	GCTTTATGGCAGCAGAATGTCCAAGAGTGTGTGCTCCTTCCTCATCACGG	11	-	56258410-56258459	11q11c	Homo sapiens olfactory receptor, family 5, subfamily M, member 8 (OR5M8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-194	OR11-194
Homo sapiens	Unigene	Hs.544941	ILMN_108254	HS.544941	Hs.544941		Hs.544941		4439891	AI525756			ILMN_1888015	0006270458	S	327	ATGTGGATACACCTGCAGTGACCCCTGCCTATGTCCCAGCAGAGAGGCCA	7	-	96850308-96850357		PT1.3_05_D10.r tumor1 Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002759.1	ILMN_168435	EIF2AK2	NM_002759.1	NM_002759.1		5610	4506102	NM_002759.1	EIF2AK2	NP_002750.1	ILMN_1706502	0002120079	S	2728	CGTTCTCTGCCTCACATAGCTTACAAGCCAGCTGGAGAAATATGGTACTC	2	-	37187233-37187282	2p22.2b	Homo sapiens eukaryotic translation initiation factor 2-alpha kinase 2 (EIF2AK2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of apoptosis in cells infected with a virus [goid 6926] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 1351683] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 1351683] [evidence TAS]; Catalysis of the phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 (EIF2) [goid 4694] [pmid 10866685] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8576172] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16288713] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 10866685] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKR; PKR; MGC126524; EIF2AK1	PRKR; PKR; MGC126524; EIF2AK1
Homo sapiens	RefSeq	NM_014242.1	ILMN_36358	ZMYM5	NM_001039650.1	NM_001039650.1		9205	89001099	NM_001039650.1	ZMYM5	NP_001034739.1	ILMN_1781028	0002750259	S	915	CACCAGTGGCCTTACTTCGTAAGCAGAATTTCCAGCCTACAGCCCAACAA	13	-	19311009-19311058	13q12.11a	Homo sapiens zinc finger, MYM-type 5 (ZMYM5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF237; MYM; HSPC050; ZNF198L1	ZNF237; MYM; HSPC050; ZNF198L1
Homo sapiens	RefSeq	NM_018077.1	ILMN_1561	RBM28	NM_018077.1	NM_018077.1		55131	8922387	NM_018077.1	RBM28	NP_060547.1	ILMN_1793033	0000380682	S	2418	AAGCTGGGTTGTGTACTTTCTGGTGACACTCCTGGGCTCCTCCCCATCCC	7	-	127738013-127738062	7q32.1a	Homo sapiens RNA binding motif protein 28 (RBM28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ10377	FLJ10377
Homo sapiens	RefSeq	NM_030882.2	ILMN_19374	APOL2	NM_030882.2	NM_030882.2		23780	22035654	NM_030882.2	APOL2	NP_112092.1	ILMN_1706582	0004040270	I	14	GCGTGTTTACTGTGCTTGGTCATGAGCTGCTGGGAAGTTGTGACTTTCAC	22	-	36635626-36635675	22q12.3d	Homo sapiens apolipoprotein L, 2 (APOL2), transcript variant alpha, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 11374903] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 11944986] [evidence NAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 11374903] [evidence NAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [pmid 11374903] [evidence NAS]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [pmid 11374903] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 11374903] [evidence NAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 11374903] [evidence NAS]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; A reproductive process occurring in the mother that allows an embryo or fetus to develop within it [goid 60135] [pmid 11374903] [evidence NAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 11374903] [evidence NAS]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [pmid 11374903] [evidence NAS]; Interacting selectively with a lipid [goid 8289] [pmid 11374903] [evidence NAS]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	APOL-II	APOL-II
Homo sapiens	RefSeq	NM_021241.2	ILMN_309301	WIZ	NM_021241.2	NM_021241.2		58525	151301214	NM_021241.2	WIZ	NP_067064.2	ILMN_3244363	0006560021	S	3835	TTCTGGGCAGCCTGTCTGGGAAGGGAGCCAGGATCAAGAAGCAGTTGAGG	19	-	15532601-15532650	19p13.12a	Homo sapiens widely interspaced zinc finger motifs (WIZ), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF803	ZNF803
Homo sapiens	RefSeq	XM_942586.1	ILMN_37098	LOC651309	XM_942586.1	XM_942586.1		651309	89036309	XM_942586.1	LOC651309	XP_947679.1	ILMN_1742431	0006900520	S	412	TCTCCCTTTCCCATCTTGACTTCTGGAATAGCCCTTGCCAAATACCAGGG					PREDICTED: Homo sapiens hypothetical protein LOC651309 (LOC651309), mRNA.					
Homo sapiens	RefSeq	NM_014335.2	ILMN_22267	EID1	NM_014335.2	NM_014335.2		23741	44680150	NM_014335.2	EID1	NP_055150.1	ILMN_1775269	0004220086	S	1879	GCTGGTCTGGGAAAACCTGCCCTATCAATGAGTATGTTGCCGTGGTTACC	15	+	46959460-46959509	15q21.1d	Homo sapiens EP300 interacting inhibitor of differentiation 1 (EID1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 11073990] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11073990] [evidence IPI]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 11073990] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 11073989] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11073990] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15837424] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11964378] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11073990] [evidence IPI]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 11073990] [evidence IDA]; Modulates the activity of histone acetyltransferase [goid 35034] [pmid 11073990] [evidence IDA]; Interacting selectively with the enzyme histone acetyltransferase [goid 35035] [pmid 11073990] [evidence IDA]	MGC138883; EID-1; RBP21; MGC138884; C15orf3; PNAS-22; PTD014; IRO45620; CRI1; EID1	MGC138883; EID-1; RBP21; MGC138884; C15orf3; PNAS-22; PTD014; IRO45620; CRI1; EID1
Homo sapiens	RefSeq	NM_152411.1	ILMN_6379	ZNF786	NM_152411.2	NM_152411.2		136051	142352124	NM_152411.2	ZNF786	NP_689624.1	ILMN_1713706	0000780189	S	3091	TGGGAGGATCGCCTGAGCCCAGGGAGGTCAAGGCTGCAGTGAGCAATGAT	7	-	148397711-148397760	7q36.1a	Homo sapiens zinc finger protein 786 (ZNF786), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp762I137; MGC156120	DKFZp762I137; MGC156120
Homo sapiens	RefSeq	XM_929113.1	ILMN_42797	LOC646149	XM_929113.1	XM_929113.1		646149	88943537	XM_929113.1	LOC646149	XP_934206.1	ILMN_1662224	0004890450	S	1209	TGCGACCGGGAGCACAGCCTCAGTTTTCAGAATAGCGCGGAGCCTCCCTA	1	+	155144734-155144756:155144931-155144957		PREDICTED: Homo sapiens similar to platelet endothelial aggregation receptor 1 (LOC646149), mRNA.					
Homo sapiens	RefSeq	NM_032026.1	ILMN_17501	TATDN1	NM_032026.1	NM_032026.1		83940	14042942	NM_032026.1	TATDN1	NP_114415.1	ILMN_2179397	0001110167	S	822	TATTGGAGATAATGTCAGCAGTGAGAGATGAGGATCCACTGGAATTAGCC	8	-	125570062-125570111	8q24.13d	Homo sapiens TatD DNase domain containing 1 (TATDN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16888] [evidence IEA]	CDA11	CDA11
Homo sapiens	RefSeq	NR_002601.1	ILMN_3216	FMO6P	NR_002601.1	NR_002601.1		388714	83281198	NR_002601.1	FMO6P		ILMN_2078124	0001090603	S	1768	AGTTTCGACTGATGGGACCAGGGAAGTGGGATGGGGCCAGAAATGCCATC	1	+	169396969-169397018	1q24.3a	Homo sapiens flavin containing monooxygenase 6 pseudogene (FMO6P), non-coding RNA.				FMO6; FLJ27001	FMO6; FLJ27001
Homo sapiens	RefSeq	XR_001521.1	ILMN_3216	FMO6P	NR_002601.1	NR_002601.1		388714	83281198	NR_002601.1	FMO6P		ILMN_1672564	0006060736	A	1839	GTGAAGCCAACCAGGACAAGAGTTGTCAGTGAAGTTCAGCGACCCCATCC	1	+	169397040-169397089	1q24.3a	Homo sapiens flavin containing monooxygenase 6 pseudogene (FMO6P), non-coding RNA.				FMO6; FLJ27001	
Homo sapiens	RefSeq	NM_001134.1	ILMN_19039	AFP	NM_001134.1	NM_001134.1		174	4501988	NM_001134.1	AFP	NP_001125.1	ILMN_1782204	0002030161	S	1784	GGAGAAATGCTGCCAAGGCCAGGAACAGGAAGTCTGCTTTGCTGAAGAGG	4	+	74319566-74319614:74320953-74320953	4q13.3d	Homo sapiens alpha-fetoprotein (AFP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process leading to the rupture of the follicle, releasing the centrally located oocyte into the oviduct [goid 1542] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IEA]; The chemical reactions and pathways involving progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants [goid 42448] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with nickel (Ni) ions [goid 16151] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HPAFP; FETA	HPAFP; FETA
Homo sapiens	RefSeq	NM_015646.4	ILMN_166610	RAP1B	NM_015646.4	NM_015646.4		5908	58219793	NM_015646.4	RAP1B	NP_056461.1	ILMN_2398474	0005890201	A	1773	GGTCACAAGGCCTAATTTGCAGTAACTATTGCTGTTTTATTTAACAATGC	12	+	67340307-67340356	12q15b	Homo sapiens RAP1B, member of RAS oncogene family (RAP1B), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	DKFZp586H0723; RAL1B; K-REV	DKFZp586H0723; RAL1B; K-REV
Homo sapiens	RefSeq	NM_145006.2	ILMN_11008	SUSD3	NM_145006.2	NM_145006.2		203328	37059752	NM_145006.2	SUSD3	NP_659443.1	ILMN_1785570	0001770168	S	921	GAATCAGCTTCCAGGTGTAGGGACCCCTTGAGGGGCCAAGCTGACATCCA	9	+	94886967-94887016	9q22.31b	Homo sapiens sushi domain containing 3 (SUSD3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC26847	MGC26847
Homo sapiens	RefSeq	NM_001029870.1	ILMN_162776	ANKRD56	NM_001029870.1	NM_001029870.1		345079	71274171	NM_001029870.1	ANKRD56	NP_001025041.1	ILMN_2072045	0002190673	S	2286	CGCTGCACTACTCAAAAGTCAGCACAACAAGTGGAAACTGGCCAACCAGT	4	-	78035691-78035740	4q21.1b	Homo sapiens ankyrin repeat domain 56 (ANKRD56), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Homo sapiens	RefSeq	NM_015638.2	ILMN_20082	TRPC4AP	NM_015638.2	NM_015638.2		26133	41872428	NM_015638.2	TRPC4AP	NP_056453.1	ILMN_2402806	0007550563	A	2703	GGACATTTAGCATTAGCTCTGTGTGAGCTCCTGCCGGTTTCTTGGCTGTC	20	-	33590624-33590673	20q11.22b	Homo sapiens transient receptor potential cation channel, subfamily C, member 4 associated protein (TRPC4AP), transcript variant 1, mRNA.	The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 11133832] [evidence IMP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11133832] [evidence NAS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 12047747] [evidence NAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 11133832] [evidence IMP]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [pmid 12047747] [evidence NAS]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [pmid 11532960] [evidence NAS]; The directed movement of substances from the cytosol to the endoplasmic reticulum of a cell [goid 46967] [pmid 11133832] [evidence NAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12047747] [evidence NAS]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [pmid 12047747] [evidence NAS]; Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate [goid 15433] [pmid 12047747] [evidence NAS]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 12047747] [evidence NAS]; Interacting selectively with phosphate [goid 42301] [pmid 11532960] [evidence NAS]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [pmid 11133832] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with the TAP1 subunit of TAP (transporter associated with antigen processing) protein [goid 46978] [evidence ISS]; Interacting selectively with the TAP2 subunit of TAP (transporter associated with antigen processing) protein [goid 46979] [pmid 11133832] [evidence IPI]; Interacting selectively with tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules [goid 46980] [pmid 12047747] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11133832] [evidence IPI]	TRUSS; C20orf188; TRRP4AP	TRUSS; C20orf188; TRRP4AP
Homo sapiens	RefSeq	NM_015638.2	ILMN_20082	TRPC4AP	NM_015638.2	NM_015638.2		26133	41872428	NM_015638.2	TRPC4AP	NP_056453.1	ILMN_2402805	0003440017	A	2949	TGCTCATTGGCCGCTGTGTTCATCCAAGGGGGTTCTCCCAGAAGTGAGGG	20	-	33590378-33590427	20q11.22b	Homo sapiens transient receptor potential cation channel, subfamily C, member 4 associated protein (TRPC4AP), transcript variant 1, mRNA.	The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 11133832] [evidence IMP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11133832] [evidence NAS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 12047747] [evidence NAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 11133832] [evidence IMP]; The directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15833] [pmid 12047747] [evidence NAS]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [pmid 11532960] [evidence NAS]; The directed movement of substances from the cytosol to the endoplasmic reticulum of a cell [goid 46967] [pmid 11133832] [evidence NAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12047747] [evidence NAS]; Enables the directed movement of peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another, into, out of, within or between cells [goid 15197] [pmid 12047747] [evidence NAS]; Catalysis of the reaction: peptide antigen(in) + ATP = peptide antigen(out) + ADP + phosphate [goid 15433] [pmid 12047747] [evidence NAS]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 12047747] [evidence NAS]; Interacting selectively with phosphate [goid 42301] [pmid 11532960] [evidence NAS]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [pmid 11133832] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with the TAP1 subunit of TAP (transporter associated with antigen processing) protein [goid 46978] [evidence ISS]; Interacting selectively with the TAP2 subunit of TAP (transporter associated with antigen processing) protein [goid 46979] [pmid 11133832] [evidence IPI]; Interacting selectively with tapasin, a member of the MHC class I loading complex which bridges the TAP peptide transporter to class I molecules [goid 46980] [pmid 12047747] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11133832] [evidence IPI]	TRUSS; C20orf188; TRRP4AP	TRUSS; C20orf188; TRRP4AP
Homo sapiens	RefSeq	NM_001031677.1	ILMN_25731	RAB24	NM_001031677.2	NM_001031677.2		53917	96975054	NM_001031677.2	RAB24	NP_001026847.1	ILMN_1714393	0002360022	I	1419	CACCCGGCTGGCCTCACTGCTTATATTAAGGCTCCTCCCAACTCTCATTT	5	-	176728342-176728391	5q35.3a	Homo sapiens RAB24, member RAS oncogene family (RAB24), transcript variant 1, mRNA.	A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_130781.1	ILMN_25731	RAB24	NM_001031677.2	NM_001031677.2		53917	96975054	NM_001031677.2	RAB24	NP_001026847.1	ILMN_1677843	0006560373	A	1210	TGGAACGGAGACAGCATTGGGCTGACTGTGGGCATGAGGAGGGATAAGGC	5	-	176728551-176728600	5q35.3a	Homo sapiens RAB24, member RAS oncogene family (RAB24), transcript variant 1, mRNA.	A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_001031677.2	ILMN_25731	RAB24	NM_001031677.2	NM_001031677.2		53917	96975054	NM_001031677.2	RAB24	NP_001026847.1	ILMN_2278850	0006590669	I	360	GTCTGAGGCTTGGGCGCTGCCTGGGCCGAGCGGAGATCGGGGTTTGCCTC	5	-	176730335-176730384	5q35.3a	Homo sapiens RAB24, member RAS oncogene family (RAB24), transcript variant 1, mRNA.	A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_001031677.2	ILMN_25731	RAB24	NM_001031677.2	NM_001031677.2		53917	96975054	NM_001031677.2	RAB24	NP_001026847.1	ILMN_2379718	0005910300	A	1035	AACCCCTACTTCTACAGCTGTTGTCATCACTGAGTCAGCACTCACCTGGC	5	-	176728726-176728743:176728744-176728775	5q35.3a	Homo sapiens RAB24, member RAS oncogene family (RAB24), transcript variant 1, mRNA.	A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_017694.2	ILMN_5981	MFSD6	NM_017694.3	NM_017694.3		54842	144953906	NM_017694.3	MFSD6	NP_060164.3	ILMN_1710209	0003870291	S	4128	GTGAGGGCTTCTCCATGACACCATAGTTCTGCCCAATACTGCATTTGGGA	2	+	191074617-191074666	2q32.2b	Homo sapiens major facilitator superfamily domain containing 6 (MFSD6), mRNA.					
Homo sapiens	RefSeq	NM_017694.3	ILMN_5981	MFSD6	NM_017694.3	NM_017694.3		54842	144953906	NM_017694.3	MFSD6	NP_060164.3	ILMN_3240524	0001430026	S	4673	ATGCAGTCATTTCCAGCCTTGTGAGCTGACACCTTCATGGGTTTGTGGAC	2	+	191075162-191075211	2q32.2b	Homo sapiens major facilitator superfamily domain containing 6 (MFSD6), mRNA.					
Homo sapiens	RefSeq	XM_001726215.1	ILMN_342552	LOC100129443	XM_001726215.1	XM_001726215.1		100129443	169162381	XM_001726215.1	LOC100129443	XP_001726267.1	ILMN_3185234	0006110278	A	365	AAACCTCAACTATGCCAGGCGTCGGCCCGTAGGAAGGCAGGGAACACAGA				1q25.1b	PREDICTED: Homo sapiens hypothetical protein LOC100129443 (LOC100129443), mRNA.					
Homo sapiens	RefSeq	XM_929698.1	ILMN_137124	LOC646748	XM_929698.1	XM_929698.1		646748	89038472	XM_929698.1	LOC646748	XP_934791.1	ILMN_1777847	0002850201	S	597	CAGGTCCAGTCCTACCTGCATATTCCTAAAGCCACAGAGAATGAGGCTAT	15	+	72721444-72721493	15q24.1b	PREDICTED: Homo sapiens hypothetical protein LOC646748 (LOC646748), mRNA.					
Homo sapiens	RefSeq	XM_932322.1	ILMN_33584	LOC643558	XM_932322.1	XM_932322.1		643558	89025000	XM_932322.1	LOC643558	XP_937415.1	ILMN_1660377	0007400241	I	1234	CTAGCTATGTGTTTATACAGGTTTATACAGATGACGTTAACCAAACTAGC	7	+	72245063-72245066:72245067-72245112		PREDICTED: Homo sapiens similar to General transcription factor II-I (GTFII-I) (TFII-I) (Bruton tyrosine kinase-associated protein 135) (BTK-associated protein 135) (BAP-135), transcript variant 6 (LOC643558), mRNA.					
Homo sapiens	RefSeq	NM_130841.1	ILMN_137874	ATP6V0A4	NM_130841.1	NM_130841.1		50617	19913421	NM_130841.1	ATP6V0A4	NP_570856.1	ILMN_1721788	0004810731	I	1	AACAGAGCTGCCTCCTGGCTCTTTGGGAGCCTGGGAGGAGAAGGAGCCGG	7	-	138109272-138109321	7q34a	Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a isoform 4 (ATP6V0A4), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 10973252] [evidence IDA]; A proton-transporting two-sector ATPase complex found in the vacuolar membrane, where it acts as a proton pump to mediate acidification of the vacuolar lumen [goid 16471] [pmid 10973252] [evidence IDA]; The portion of the plasma membrane surrounding the brush border [goid 31526] [pmid 14638902] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 10973252] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [pmid 10973252] [evidence IMP]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 12414817] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 12414817] [evidence IMP]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 10973252] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12649290] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]	RDRTA2; Stv1; MGC130016; VPP2; RTA1C; a4; RTADR; ATP6N1B; Vph1; ATP6N2; MGC130017	RDRTA2; Stv1; MGC130016; VPP2; RTA1C; a4; RTADR; ATP6N1B; Vph1; ATP6N2; MGC130017
Homo sapiens	RefSeq	XM_931823.1	ILMN_45554	LOC643809	XM_943965.1	XM_943965.1		643809	88978946	XM_943965.1	LOC643809	XP_949058.1	ILMN_1695048	0001820202	S	189	GCCCAGGGCCCCCACAGGAGGGAACAGCAGCCAAGGCTTGCTGAGCCCCG					PREDICTED: Homo sapiens hypothetical LOC643809 (LOC643809), mRNA.					
Homo sapiens	RefSeq	NM_015170.1	ILMN_28982	SULF1	NM_015170.1	NM_015170.1		23213	29789063	NM_015170.1	SULF1	NP_055985.1	ILMN_1702363	0002570240	S	5258	CCTCACTGAGTCATCAGTACCCTCCTATTCAGCTCCCCAAGATGATGTGT	8	+	70735259-70735308	8q13.2c-q13.3a	Homo sapiens sulfatase 1 (SULF1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 12368295] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12368295] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving any proteoglycan containing heparan sulfate, any member of a group of glycosaminoglycans that have repeat units consisting of alternating alpha1->4 linked hexuronic acid and glucosamine residues, the former being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter being either sulfated or acetylated on its amino group as well as sulfated on one of its hydroxyl groups [goid 30201] [pmid 12368295] [evidence NAS]	Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 12368295] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	SULF-1; FLJ30905; KIAA1077; HSULF-1; FLJ38022; FLJ41750	SULF-1; FLJ30905; KIAA1077; HSULF-1; FLJ38022; FLJ41750
Homo sapiens	RefSeq	NR_002603.1	ILMN_20243	LOC440353	NR_002603.1	NR_002603.1		440353	83415185	NR_002603.1	LOC440353		ILMN_3243664	0000270747	S	2284	TGCGGGGGCCGCTTCCACCCTCAGCGGATGATAATCTCAAGACACCTTCT	16	-	29403002-29403051	16p11.2d	Homo sapiens nuclear pore complex interacting protein pseudogene (LOC440353), non-coding RNA.					
Homo sapiens	RefSeq	NM_139275.1	ILMN_19105	AKAP1	NM_139275.1	NM_139275.1		8165	21493034	NM_139275.1	AKAP1	NP_644804.1	ILMN_1662598	0007040288	I	1820	GTGTCCTGGGTTTTTCGAGTGCTGACCCCAGCGTAGACAGTTCAGACCGC	17	+	52540349-52540373:52540374-52540398	17q22c	Homo sapiens A kinase (PRKA) anchor protein 1 (AKAP1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8769136] [evidence TAS]	D-AKAP1; AKAP149; MGC1807; AKAP121; SAKAP84; PRKA1; AKAP; AKAP84	D-AKAP1; AKAP149; MGC1807; AKAP121; SAKAP84; PRKA1; AKAP; AKAP84
Homo sapiens	RefSeq	XM_001715424.1	ILMN_353110	LOC341378	XM_001715424.1	XM_001715424.1		341378	169203882	XM_001715424.1	LOC341378	XP_001715476.1	ILMN_3296700	0006760047	M	856	TCAGGTAGAAGACGAGAGGTAAATTCGGTTTTGGCTCCTCGCTCGGCAGC	12	+	105090142-105090191	12q23.3c	PREDICTED: Homo sapiens hypothetical LOC341378 (LOC341378), mRNA.					
Homo sapiens	RefSeq	NM_001006120.2	ILMN_6816	RBMY1D	NM_001006120.2	NM_001006120.2		378949	56090532	NM_001006120.2	RBMY1D	NP_001006120.2	ILMN_3242490	0001440471	S	1569	GTCGATCTGAAAAAGGAGACTCGAGCAGATATTAAAGCAAGCATTGAAAA	Y	-	24026485-24026500:24026501-24026534	Yq11.223b	Homo sapiens RNA binding motif protein, Y-linked, family 1, member D (RBMY1D), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	NM_001061.2	ILMN_23430	TBXAS1	NM_001061.2	NM_001061.2		6916	13699838	NM_001061.2	TBXAS1	NP_001052.1	ILMN_2282641	0003940390	I	1704	TCAAGTTGACACTGCTCCACGTGCTGCACAAGTTCCGGTTCCAAGCCTGC	7	+	139364041-139364090	7q34c	Homo sapiens thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A) (TBXAS1), transcript variant TXS-I, mRNA.				TS; CYP5A1; TXS; TXAS; CYP5; THAS	TS; CYP5A1; TXS; TXAS; CYP5; THAS
Homo sapiens	RefSeq	NM_021999.2	ILMN_3199	ITM2B	NM_021999.2	NM_021999.2		9445	31542987	NM_021999.2	ITM2B	NP_068839.1	ILMN_1751708	0006380315	S	713	CCCTCTGAACACTTCCATTGTTATGCCACCCAGAAACCTACTGGAGTTAC	13	+	47730331-47730373:47730934-47730940	13q14.2b	Homo sapiens integral membrane protein 2B (ITM2B), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10391242] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	E3-16; BRICD2B; FBD; E25B; BRI; BRI2; ABRI	E3-16; BRICD2B; FBD; E25B; BRI; BRI2; ABRI
Homo sapiens	RefSeq	NM_021999.2	ILMN_3199	ITM2B	NM_021999.2	NM_021999.2		9445	31542987	NM_021999.2	ITM2B	NP_068839.1	ILMN_2207720	0000540347	S	1663	CTAGACTGCGTGTTGTTTTTCCCGTATAATAAAACCAAAGAATAGTTTGG	13	+	47734032-47734081	13q14.2b	Homo sapiens integral membrane protein 2B (ITM2B), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10391242] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	E3-16; BRICD2B; FBD; E25B; BRI; BRI2; ABRI	E3-16; BRICD2B; FBD; E25B; BRI; BRI2; ABRI
Homo sapiens	RefSeq	NM_017559.2	ILMN_172649	FNDC8	NM_017559.2	NM_017559.2		54752	62234418	NM_017559.2	FNDC8	NP_060029.1	ILMN_1682221	0004590497	S	1068	CCCAGGACACCCCTCACCTACTTTCAGCTTCAACCCCAGGCCCTCAGAAA	17	+	30481577-30481626	17q12a	Homo sapiens fibronectin type III domain containing 8 (FNDC8), mRNA.				DKFZp434H2215	DKFZp434H2215
Homo sapiens	RefSeq	NM_003875.2	ILMN_178321	LOC728564	XR_015319.1	XR_015319.1		728564	113415474	XR_015319.1	LOC728564		ILMN_1771734	0005810465	S	488	ACATTCTCAGGGAGTCTGGGTATGCTGGGAAAATCAGCCAGATGCCGGTG	4	+	8227334-8227383	4p16.1d	PREDICTED: Homo sapiens similar to GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase) (LOC728564), mRNA.					
Homo sapiens	RefSeq	NM_000137.1	ILMN_1400	FAH	NM_000137.1	NM_000137.1		2184	4557586	NM_000137.1	FAH	NP_000128.1	ILMN_1781536	0004060471	S	1133	CGGCTCCATGTTGGAACTGTCGTGGAAGGGAACGAAGCCCATAGACCTGG	15	+	78260453-78260502	15q25.1b	Homo sapiens fumarylacetoacetate hydrolase (fumarylacetoacetase) (FAH), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8364576] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6572] [pmid 9305902] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate [goid 4334] [pmid 1998338] [evidence TAS]; Catalysis of the reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate [goid 4334] [pmid 8364576] [evidence EXP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_022716.2	ILMN_9847	PRRX1	NM_006902.3	NM_006902.3		5396	56699461	NM_006902.3	PRRX1	NP_008833.1	ILMN_1739496	0000580431	A	3723	GATGCCTTCTGGATCTTAAGCCAGTTGTCAGTGGAGGTCCTCAGGGCTGC	1	+	168974817-168974866	1q24.2c	Homo sapiens paired related homeobox 1 (PRRX1), transcript variant pmx-1a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 1509260] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PRX1; PMX1; PHOX1	PRX1; PMX1; PHOX1
Homo sapiens	RefSeq	NM_006902.3	ILMN_9847	PRRX1	NM_006902.3	NM_006902.3		5396	56699461	NM_006902.3	PRRX1	NP_008833.1	ILMN_1811851	0003400372	I	649	CCTCGTCCCTCCCAAGATGTTGTTTACACGAGGGGCTTCATAACGGATTC	1	+	168966044-168966093	1q24.2c	Homo sapiens paired related homeobox 1 (PRRX1), transcript variant pmx-1a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 1509260] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PRX1; PMX1; PHOX1	PRX1; PMX1; PHOX1
Homo sapiens	RefSeq	XM_930039.1	ILMN_31834	LOC645073	XM_930039.1	XM_930039.1		645073	89059643	XM_930039.1	LOC645073	XP_935132.1	ILMN_1657125	0004880154	I	492	TGAACAATTGCTTCTTAAAACTTTCCCCACGGAAACCTTGAGTGACTGAA	X	+	49227975-49227977:49228568-49228605:49228606-49228614	Xp11.23b	PREDICTED: Homo sapiens similar to GAGE-1 protein (G antigen 1) (MZ2-F antigen), transcript variant 1 (LOC645073), mRNA.					
Homo sapiens	RefSeq	NM_152525.3	ILMN_3134	ALS2CR11	NM_152525.3	NM_152525.3		151254	37059794	NM_152525.3	ALS2CR11	NP_689738.2	ILMN_1792449	0001450431	S	1414	GGCAGAATACCACCTTTAGGTGAACGTCAATCAGAAAGCATGCCAGACAG	2	-	202109076-202109125	2q33.1f	Homo sapiens amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 (ALS2CR11), mRNA.				FLJ40332; FLJ25351	FLJ40332; FLJ25351
Homo sapiens	RefSeq	NM_000735.2	ILMN_25193	CGA	NM_000735.2	NM_000735.2		1081	10800407	NM_000735.2	CGA	NP_000726.1	ILMN_1734176	0002350730	S	370	ACAGGGTCACAGTAATGGGGGGTTTCAAAGTGGAGAACCACACGGCGTGC	6	-	87852225-87852270:87852687-87852690	6q15a	Homo sapiens glycoprotein hormones, alpha polypeptide (CGA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 481597] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 481597] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 481597] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 481597] [evidence TAS]	GPHa; TSHA; FSHA; LHA; HCG; GPHA1; CG-ALPHA	GPHa; TSHA; FSHA; LHA; HCG; GPHA1; CG-ALPHA
Homo sapiens	RefSeq	NM_020233.3	ILMN_6506	C17ORF48	NM_020233.4	NM_020233.4		56985	94158593	NM_020233.4	C17orf48	NP_064618.3	ILMN_1702526	0006580129	S	888	GGTGTGTTTCTTTGCTGGTCACACCCATGATGGTGGCTACTCTGAGGATC	17	+	10554970-10555019	17p13.1a	Homo sapiens chromosome 17 open reading frame 48 (C17orf48), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MDS006; NBLA03831	MDS006; NBLA03831
Homo sapiens	RefSeq	XM_001725433.1	ILMN_339250	LOC100131897	XM_001725433.1	XM_001725433.1		100131897	169168082	XM_001725433.1	LOC100131897	XP_001725485.1	ILMN_3204346	0000020722	A	3276	CCAGATTCCCACCACGAGCAAAACCCCACACTACACCTTCCAACACCTCC				5q35.1b-q35.1c	PREDICTED: Homo sapiens hypothetical protein LOC100131897 (LOC100131897), mRNA.					
Homo sapiens	Unigene	Hs.452398	ILMN_93812	HS.452398	Hs.452398		Hs.452398		21756009	AK096497			ILMN_1907556	0001510204	S	2356	GTCCTACTGCCACACTGGATAAGGCCACTACCCCCGACCCTTCTTGTCAG	2	+	166250991-166251040		Homo sapiens cDNA FLJ39178 fis, clone OCBBF2004104					
Homo sapiens	RefSeq	XM_929108.1	ILMN_46853	LOC646145	XM_929108.1	XM_929108.1		646145	89037964	XM_929108.1	LOC646145	XP_934201.1	ILMN_1777608	0005130170	S	135	GTTGCAGACCCCTGGCAAATTGTGGAGCTGGGGGAAGTGCAGCCCTGGTT	15	-	19007108-19007121:19014588-19014623		PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC646145), mRNA.					
Homo sapiens	RefSeq	NM_024504.2	ILMN_172727	PRDM14	NM_024504.2	NM_024504.2		63978	41349468	NM_024504.2	PRDM14	NP_078780.1	ILMN_2163835	0003360711	S	1800	ACAGCCATGTCCGGCGTTCACACAAGGAGGATGATGGCTGCTCATGCAGC	8	-	71126934-71126983	8q13.3a	Homo sapiens PR domain containing 14 (PRDM14), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC59730; PFM11	MGC59730; PFM11
Homo sapiens	Unigene	Hs.278303	ILMN_84364	HS.278303	Hs.278303		Hs.278303		4406614	AF131786			ILMN_1888685	0003780687	S	969	TGCTTTCTGGCAGTACAAGGTGTCTCAGAGTTGCCCGTGCTTTCTGCCTG	7	-	42907708-42907757		Homo sapiens clone 25220 mRNA sequence					
Homo sapiens	RefSeq	NM_152581.1	ILMN_28307	MOSPD2	NM_152581.2	NM_152581.2		158747	141801490	NM_152581.2	MOSPD2	NP_689794.1	ILMN_1766094	0000450193	S	2509	GCAGAGGAGTCTCTGTGGACCATGAATTGCACTGTCTCCCTCCTCATTTC	X	+	14848716-14848765	Xp22.2	Homo sapiens motile sperm domain containing 2 (MOSPD2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC26706	MGC26706
Homo sapiens	RefSeq	NR_021493.1	ILMN_356997	LOC100144604	NR_021493.1	NR_021493.1		100144604	181336469	NR_021493.1	LOC100144604		ILMN_3246405	0005420615	S	1691	CAGATGCCGACACTATGCTTCCTGCACAGCCTGCCATACCATGAGCCAAT	15	-	93111069-93111118		Homo sapiens hypothetical LOC100144604 (LOC100144604), non-coding RNA.					
Homo sapiens	RefSeq	NM_024933.2	ILMN_12214	ANKRD53	NM_024933.2	NM_024933.2		79998	46358069	NM_024933.2	ANKRD53	NP_079209.2	ILMN_1772660	0000150097	S	1871	CGATCTCATCAAGGACTCCCCACCCTGCCCTCCCCACAAACCAACCCATA	2	+	71065888-71065937	2p13.3c	Homo sapiens ankyrin repeat domain 53 (ANKRD53), mRNA.				FLJ36160; FLJ12056	FLJ36160; FLJ12056
Homo sapiens	RefSeq	XM_941920.1	ILMN_35744	LOC652468	XM_941920.1	XM_941920.1		652468	88955160	XM_941920.1	LOC652468	XP_947013.1	ILMN_1675529	0003060441	S	1	TGGAAAGTTTGATCATTTAATTTCCCTGTTAAATACTTCTCTTGTGAGCT					PREDICTED: Homo sapiens hypothetical protein LOC652468 (LOC652468), mRNA.					
Homo sapiens	RefSeq	NM_005715.1	ILMN_13470	UST	NM_005715.1	NM_005715.1		10090	5032218	NM_005715.1	UST	NP_005706.1	ILMN_1700024	0007380338	S	3723	ACTTACAGGGCCTTAATGTTATTTTGTCCCAGCCAACACCCTCTAGGTCC	6	+	149439344-149439393	6q25.1a	Homo sapiens uronyl-2-sulfotransferase (UST), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10187838] [evidence TAS]	The addition of a sulfate group as an ester to a protein amino acid [goid 6477] [pmid 10187838] [evidence TAS]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [pmid 10187838] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	2OST	2OST
Homo sapiens	Unigene	Hs.562624	ILMN_115686	HS.562624	Hs.562624		Hs.562624		11511128	BF445990			ILMN_1895915	0006450437	S	241	GAGCAGGAGTGGCAGCAGTGGGGGCCAGCAGTAGGTGTTTGTTCCAGGTT	15	-	30259676-30259725		7p17e02.x1 NCI_CGAP_Br22 Homo sapiens cDNA clone IMAGE:3646155 3, mRNA sequence					
Homo sapiens	Unigene	Hs.91389	ILMN_74159	HS.91389	Hs.91389		Hs.91389		60552342	BC090942			ILMN_1898723	0001990022	S	3556	GTAGGCCCCCAAAGTGCCGTCTTTCCCTAGCATTTTACTCAATGTTTGCC	X	-	46343955-46344004		Homo sapiens cDNA clone IMAGE:3079901					
Homo sapiens	RefSeq	NM_001008708.1	ILMN_1763	CHAC2	NM_001008708.1	NM_001008708.1		494143	56790286	NM_001008708.1	CHAC2	NP_001008708.1	ILMN_2148150	0002850082	S	460	CCTGCACCTCTGGAAGACATTGCTGAACAAATTTTTAATGCAGCTGGTCC	2	+	53854976-53855025	2p16.2a	Homo sapiens ChaC, cation transport regulator homolog 2 (E. coli) (CHAC2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_001039919.1	ILMN_38177	ZNF384	NM_001039919.1	NM_001039919.1		171017	90193616	NM_001039919.1	ZNF384	NP_001035008.1	ILMN_2347943	0006550719	A	2274	CTCCTTTTATTTGAAGGGGGCAAGGGCTGAGATGTGGTCCCCAAGGGGCC	12	-	6776260-6776309	12p13.31d	Homo sapiens zinc finger protein 384 (ZNF384), transcript variant 5, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ERDA2; CAGH1A; TNRC1; CIZ; CAGH1; NP; NMP4	ERDA2; CAGH1A; TNRC1; CIZ; CAGH1; NP; NMP4
Homo sapiens	RefSeq	NM_006343.2	ILMN_173016	MERTK	NM_006343.2	NM_006343.2		10461	66932917	NM_006343.2	MERTK	NP_006334.2	ILMN_2138589	0007550066	S	3210	CTTCCTTACCAAGTGAACTCCATGGCCCCAAAGCACCAGATGAATGTTGT	2	+	112503000-112503049	2q13c-q13d	Homo sapiens c-mer proto-oncogene tyrosine kinase (MERTK), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8086340] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8086340] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8086340] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8086340] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8086340] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 8086340] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC133349; c-mer; RP38; MER	MGC133349; c-mer; RP38; MER
Homo sapiens	RefSeq	NM_177963.2	ILMN_14985	SYT12	NM_177963.2	NM_177963.2		91683	31342626	NM_177963.2	SYT12	NP_808878.1	ILMN_1815610	0004390736	S	3180	CTTTGCAGCCTGGGAGACCCCGACTTTCTCTAACCCAGTGGCTGTGCGGT	11	+	66574654-66574703	11q13.1f	Homo sapiens synaptotagmin XII (SYT12), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SRG1; SYT11	SRG1; SYT11
Homo sapiens	RefSeq	NM_005845.2	ILMN_169694	ABCC4	NM_005845.2	NM_005845.2		10257	34452699	NM_005845.2	ABCC4	NP_005836.1	ILMN_2194009	0006110181	S	5504	CACACAGCTAACTGCCAAAATACATTGACCGTAGTAGCTGTTCAACTCCT	13	-	94470369-94470418	13q32.1a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 4 (ABCC4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 15297306] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15297306] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [pmid 15297306] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+ [goid 16404] [pmid 7557451] [evidence NAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MOATB; EST170205; MRP4; MOAT-B	MOATB; EST170205; MRP4; MOAT-B
Homo sapiens	RefSeq	NM_173215.1	ILMN_9325	NFAT5	NM_173215.1	NM_173215.1		10725	27886525	NM_173215.1	NFAT5	NP_775322.1	ILMN_1655218	0003930431	I	4983	GTAAGTATTGCATTTTGGCTTCTTATTGAAAAGCATCAGATTTTATTCTT	16	+	68286784-68286833	16q22.1e	Homo sapiens nuclear factor of activated T-cells 5, tonicity-responsive (NFAT5), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10051678] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10377394] [evidence NAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 10051678] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10051678] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10377394] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15790681] [evidence IDA]	NFATL1; OREBP; TONEBP; NF-AT5; KIAA0827; NFATZ	NFATL1; OREBP; TONEBP; NF-AT5; KIAA0827; NFATZ
Homo sapiens	RefSeq	NM_173215.1	ILMN_9325	NFAT5	NM_173215.1	NM_173215.1		10725	27886525	NM_173215.1	NFAT5	NP_775322.1	ILMN_1797594	0003120136	A	4804	CCAGGCCAACCACAAAACGAGGGCCAGCCACCTGTGACAACACTTCTTTC	16	+	68286605-68286654	16q22.1e	Homo sapiens nuclear factor of activated T-cells 5, tonicity-responsive (NFAT5), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10051678] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10377394] [evidence NAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 10051678] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10051678] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10377394] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15790681] [evidence IDA]	NFATL1; OREBP; TONEBP; NF-AT5; KIAA0827; NFATZ	NFATL1; OREBP; TONEBP; NF-AT5; KIAA0827; NFATZ
Homo sapiens	RefSeq	NM_003642.2	ILMN_24074	HAT1	NM_003642.2	NM_003642.2		8520	74319829	NM_003642.2	HAT1	NP_003633.1	ILMN_1693905	0004250500	I	191	TGACATTAGAACTTTCTTTCCTGAGTATACCCATCAACTCTTTGGGGATG	2	+	172511499-172511548	2q31.1d	Homo sapiens histone acetyltransferase 1 (HAT1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9427644] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process by which DNA and associated proteins are formed into a compact, orderly structure [goid 6323] [pmid 9427644] [evidence TAS]; The addition of an acetyl group to a non-terminal amino acid in a protein [goid 6475] [pmid 9427644] [evidence TAS]	Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [pmid 9427644] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9427644] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KAT1	KAT1
Homo sapiens	RefSeq	NM_003642.2	ILMN_24074	HAT1	NM_003642.2	NM_003642.2		8520	74319829	NM_003642.2	HAT1	NP_003633.1	ILMN_1725244	0003420068	A	1239	GAACAGCTGGAAGAGAGTTTTCAGGAACTAGTGGAAGATTACCGGCGTGT	2	+	172556438-172556487	2q31.1d	Homo sapiens histone acetyltransferase 1 (HAT1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9427644] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process by which DNA and associated proteins are formed into a compact, orderly structure [goid 6323] [pmid 9427644] [evidence TAS]; The addition of an acetyl group to a non-terminal amino acid in a protein [goid 6475] [pmid 9427644] [evidence TAS]	Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [pmid 9427644] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9427644] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KAT1	KAT1
Homo sapiens	RefSeq	NM_015697.5	ILMN_44362	COQ2	NM_015697.6	NM_015697.6		27235	90403589	NM_015697.6	COQ2	NP_056512.4	ILMN_1756572	0005720128	S	1318	TCCCCCTTGTCACAGAAACCAGGGACTCTTCAGGATTTGAGATGGCCTTG	4	-	84404171-84404220	4q21.23a	Homo sapiens coenzyme Q2 homolog, prenyltransferase (yeast) (COQ2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15153069] [evidence RCA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15153069] [evidence RCA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [pmid 15153069] [evidence IGI]; The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme [goid 6744] [pmid 15153069] [evidence IDA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor) [goid 4659] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CL640; FLJ26072	CL640; FLJ26072
Homo sapiens	RefSeq	NM_004168.1	ILMN_22058	SDHA	NM_004168.1	NM_004168.1		6389	4759079	NM_004168.1	SDHA	NP_004159.1	ILMN_2051232	0003180470	S	1983	CTGTGCCACCATCCCGCCAGCCATTCGCTCCTACTGATGAGACAAGATGT	5	+	309499-309535:309536-309548	5p15.33e	Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16826196] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7550341] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 16143825] [evidence EXP]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain [goid 5749] [pmid 7550341] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [pmid 7550341] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor. No reaction with quinols [goid 104] [pmid 7550341] [evidence IDA]; Catalysis of the reaction: succinate + quinone = fumarate + quinol [goid 8177] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	SDHF; SDH2; FP	SDHF; SDH2; FP
Homo sapiens	RefSeq	NM_004168.1	ILMN_22058	SDHA	NM_004168.1	NM_004168.1		6389	4759079	NM_004168.1	SDHA	NP_004159.1	ILMN_1744210	0000360424	S	1369	GCCAACCGCCTCGGGGCAAACTCGCTCTTGGACCTGGTTGTCTTTGGTCG	5	+	289627-289676	5p15.33e	Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein (Fp) (SDHA), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16826196] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7550341] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 16143825] [evidence EXP]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the four polypeptide subunits of succinate dehydrogenase, flavin-adenine dinucleotide and iron-sulfur. Catalyzes the oxidation of succinate by ubiquinone. Connects the TCA cycle with the respiratory chain [goid 5749] [pmid 7550341] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [pmid 7550341] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor. No reaction with quinols [goid 104] [pmid 7550341] [evidence IDA]; Catalysis of the reaction: succinate + quinone = fumarate + quinol [goid 8177] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	SDHF; SDH2; FP	SDHF; SDH2; FP
Homo sapiens	RefSeq	XM_932160.1	ILMN_42028	LOC644386	XM_932160.1	XM_932160.1		644386	88953396	XM_932160.1	LOC644386	XP_937253.1	ILMN_1709803	0003520184	S	23	ATTTTACTTTAAGTTATAGAGTACATGTGCACAACGTGCAGGCTTGTTAC	2	-	104493609-104493658		PREDICTED: Homo sapiens hypothetical protein LOC644386 (LOC644386), mRNA.					
Homo sapiens	RefSeq	NM_018268.2	ILMN_28575	WDR41	NM_018268.2	NM_018268.2		55255	42716286	NM_018268.2	WDR41	NP_060738.2	ILMN_1778488	0002650148	S	2397	GCTGAGCGCAACTGCCCCATCTGACCACTGACTCAAATACGAACTGCTTG	5	-	76764390-76764439	5q14.1a	Homo sapiens WD repeat domain 41 (WDR41), mRNA.				MSTP048; FLJ10904	MSTP048; FLJ10904
Homo sapiens	RefSeq	NM_002891.3	ILMN_12550	RASGRF1	NM_002891.3	NM_002891.3		5923	24797098	NM_002891.3	RASGRF1	NP_002882.3	ILMN_1779386	0004760168	I	1564	GACTGCACTTTATTGGAGGAGCCAGAAAGCACGGAGGAGGAAGCCAAAGG	15	-	77097296-77097303:77099438-77099479	15q25.1a	Homo sapiens Ras protein-specific guanine nucleotide-releasing factor 1 (RASGRF1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10918068] [evidence NAS]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [pmid 10918068] [evidence NAS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISS]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; The activities involved in the mental information processing system that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation [goid 7616] [pmid 10918068] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence ISS]; Any process that activates or increases the activity of a GTPase of the Ras superfamily [goid 32320] [evidence ISS]; Any process that initiates the activity of an inactive GTPase of the Rac family through the replacement of GDP by GTP [goid 32863] [evidence ISS]; Any process that modulates the frequency, rate or extent of Rac protein signal transduction [goid 35020] [evidence ISS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with a glutamate receptor [goid 35254] [evidence IEA]	PP13187; GRF55; H-GRF55; GRF1; GNRP; CDC25L; CDC25	PP13187; GRF55; H-GRF55; GRF1; GNRP; CDC25L; CDC25
Homo sapiens	RefSeq	XM_496089.4	ILMN_34471	LOC440302	XM_496089.4	XM_496089.4		440302	169208490	XM_496089.4	LOC440302	XP_496089.2	ILMN_3214684	0003310360	A	198	TCATCTTCTTCACCGATATGGTTTGTGGACTCTGATGAGCCAAATCTGAC	15	-	82758518-82758567	15q25.2b	PREDICTED: Homo sapiens hypothetical LOC440302 (LOC440302), mRNA.					
Homo sapiens	RefSeq	XM_934846.1	ILMN_45431	LOC653625	XM_934846.1	XM_934846.1		653625	89038374	XM_934846.1	LOC653625	XP_939939.1	ILMN_1786290	0004120468	I	127	ACGGGGCCCCGAGGGGGATGACCTGGCAACCTCCGTGCCTTCTCACTCTG	15	-	72152227-72152276		PREDICTED: Homo sapiens similar to Golgi autoantigen, golgin subfamily A member 6 (Golgin linked to PML) (Golgin-like protein), transcript variant 2 (LOC653625), mRNA.					
Homo sapiens	Unigene	Hs.562281	ILMN_115427	HS.562281	Hs.562281		Hs.562281		19355121	BM904742			ILMN_1881893	0004200689	S	181	GGGAAACTGAGGCTTAAAGGGCAGAAGGGACTTGCCCAAGGTCACCCAGC	10	-	76856223-76856272		AGENCOURT_6699305 NIH_MGC_72 Homo sapiens cDNA clone IMAGE:5557542 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001722784.1	ILMN_348117	LOC100129117	XM_001722784.1	XM_001722784.1		100129117	169211782	XM_001722784.1	LOC100129117	XP_001722836.1	ILMN_3268199	0004560563	M	539	GGATGGCTCAGTGGGGCTTTCAAGGGACAAGTATGGGGGTTGAAGGGGTC				17q12c	PREDICTED: Homo sapiens hypothetical protein LOC100129117 (LOC100129117), mRNA.					
Homo sapiens	RefSeq	NM_021098.2	ILMN_22275	CACNA1H	NM_021098.2	NM_021098.2		8912	53832008	NM_021098.2	CACNA1H	NP_066921.2	ILMN_1671263	0006220343	A	7914	ATCAGGCCTCCCCTACATCTGGGGGCGTTGGCCGCGAGATTCCCATTGAC	16	+	1211052-1211101	16p13.3e	Homo sapiens calcium channel, voltage-dependent, T type, alpha 1H subunit (CACNA1H), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 10861024] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9670923] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9670923] [evidence NAS]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [pmid 10861024] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9670923] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a low voltage-gated channel [goid 8332] [pmid 10861024] [evidence TAS]	CACNA1HB; FLJ90484; Cav3.2	CACNA1HB; FLJ90484; Cav3.2
Homo sapiens	RefSeq	XM_945568.1	ILMN_139146	MGC40499	XM_945568.1	XM_945568.1		245812	89026174	XM_945568.1	MGC40499	XP_950661.1	ILMN_1768841	0006270537	I	95	CTGCAGAATGAATGGCTGGTGTGTTTGTCTTTTACCTCCCCCCGGACGTT				7q22.1c	PREDICTED: Homo sapiens PRotein Associated with Tlr4, transcript variant 4 (MGC40499), mRNA.					
Homo sapiens	Unigene	Hs.147346	ILMN_78474	HS.147346	Hs.147346		Hs.147346		4260467	AI416963			ILMN_1864989	0004180370	S	227	AACCTTACACACCTTCCTCCCAGGGGCATACACTCAAGCAAGTCAACTCC	18	+	69732604-69732653		th02b02.x1 NCI_CGAP_CLL1 Homo sapiens cDNA clone IMAGE:2117067 3, mRNA sequence					
Homo sapiens	Unigene	Hs.348697	ILMN_86950	HS.348697	Hs.348697		Hs.348697		20380940	BC028245			ILMN_1886877	0006620706	S	444	TCTGCATTTCTAACAAGTCCCCGGTGGTGCTGATGCTGCTTGCATGGACC	2	-	67876903-67876952		Homo sapiens, Similar to hypothetical gene LOC130797, clone IMAGE:5395354, mRNA					
Homo sapiens	RefSeq	NM_207490.1	ILMN_7966	FLJ45721	NM_207490.1	NM_207490.1		401123	46409609	NM_207490.1	FLJ45721	NP_997373.1	ILMN_1699216	0004060615	S	2217	TGCCCGGAACACGTTTGTGGTCCCTGATTCCATCTCTAGATACTGCAGGG	4	-	26818467-26818516	4p15.2a	Homo sapiens FLJ45721 protein (FLJ45721), mRNA.					
Homo sapiens	RefSeq	NM_001017421.1	ILMN_2393	FKSG30	NM_001017421.1	NM_001017421.1		440915	62990120	NM_001017421.1	FKSG30	NP_001017421.1	ILMN_1814998	0004880646	S	822	CCTGGGCATGGAATCCTGTGGCATCCACAAAACTACCTTCAACTCCATAG	2	+	132100979-132101028	2q21.1d	Homo sapiens actin-like protein (FKSG30), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	ACT	ACT
Homo sapiens	RefSeq	NM_001017421.1	ILMN_2393	FKSG30	NM_001017421.1	NM_001017421.1		440915	62990120	NM_001017421.1	FKSG30	NP_001017421.1	ILMN_2112673	0002030377	S	700	GAGATGGCCATGGCAGCCTCCAGCTCCTCCGTAGAGAAGAGCTACGAGCT	2	+	132100857-132100906	2q21.1d	Homo sapiens actin-like protein (FKSG30), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	ACT	ACT
Homo sapiens	RefSeq	XR_038048.1	ILMN_344661	LOC100131963	XR_038048.1	XR_038048.1		100131963	169210113	XR_038048.1	LOC100131963		ILMN_3243356	0003460482	S	202	AGACAGGGTCTCACTGTGTCATCCAGAGCGGTCTCTAGCTCCTGGCCTTA	16	+	88759108-88759157	16q24.3b	PREDICTED: Homo sapiens misc_RNA (LOC100131963), miscRNA.					
Homo sapiens	RefSeq	NM_015184.2	ILMN_22323	PLCL2	NM_015184.3	NM_015184.3		23228	142369931	NM_015184.3	PLCL2	NP_055999.1	ILMN_1737025	0000670711	S	3798	GGACTGAAGCTCCCTGGCTGAAGATACATGCCGAGTCAGCACATGGGTAG	3	+	17106947-17106996	3p24.3d	Homo sapiens phospholipase C-like 2 (PLCL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PLCE2; KIAA1092; FLJ13484	PLCE2; KIAA1092; FLJ13484
Homo sapiens	RefSeq	NM_022003.1	ILMN_26508	FXYD6	NM_022003.1	NM_022003.1		53826	11612654	NM_022003.1	FXYD6	NP_071286.1	ILMN_1768812	0000160270	S	1507	GAAGGTCATAACGAGAGTGGGAACTCAACCCAGATCCCGCCCCTCCTGTC	11	-	117213021-117213070	11q23.3c	Homo sapiens FXYD domain containing ion transport regulator 6 (FXYD6), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]		
Homo sapiens	RefSeq	XM_936590.1	ILMN_45790	LOC647533	XM_936590.1	XM_936590.1		647533	89036092	XM_936590.1	LOC647533	XP_941683.1	ILMN_1663709	0005390196	S	6026	CTGGAGCTGCTGGTGAAAACACTTCTGGAGCATTGGGTATGGAAAGAGCA					PREDICTED: Homo sapiens similar to mucin 19 (LOC647533), mRNA.					
Homo sapiens	RefSeq	NM_018134.1	ILMN_14474	IQCC	NM_018134.1	NM_018134.1		55721	8922508	NM_018134.1	IQCC	NP_060604.1	ILMN_1774589	0005270343	S	1945	GTGTGGCTAAGGAGTTACCTGGGGGAAGTAGAATGAGAGGTCTGTTGGGA	1	+	32446803-32446852	1p35.1b	Homo sapiens IQ motif containing C (IQCC), mRNA.				MGC120341; FLJ10547; RP4-622L5.6	MGC120341; FLJ10547; RP4-622L5.6
Homo sapiens	RefSeq	NM_001093725.1	ILMN_307549	MEX3A	NM_001093725.1	NM_001093725.1		92312	147902745	NM_001093725.1	MEX3A	NP_001087194.1	ILMN_3239177	0004050228	S	5744	GCTCTTTTTGTCCTAGAAACCCCGCTAGTTTGGGATGGTAGCGTCTGGGG	1	-	156042134-156042183	1q22c	Homo sapiens mex-3 homolog A (C. elegans) (MEX3A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MEX-3A; RKHD4	RKHD4; MEX-3A
Homo sapiens	RefSeq	NM_020866.1	ILMN_13866	KLHL1	NM_020866.1	NM_020866.1		57626	14780903	NM_020866.1	KLHL1	NP_065917.1	ILMN_1809760	0005700687	S	3600	CACTGAGCCAAAGATGCAGTGTAATTATTGGGCTTTTGCCTTATGTTGAG	13	-	69173060-69173109	13q21.33b	Homo sapiens kelch-like 1 (Drosophila) (KLHL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10888605] [evidence NAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10888605] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 10888605] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MRP2; KIAA1490; FLJ30047	MRP2; KIAA1490; FLJ30047
Homo sapiens	Unigene	Hs.466840	ILMN_94758	HS.466840	Hs.466840		Hs.466840		23287556	BU621341			ILMN_1917045	0002900215	S	317	CAGGGTGGGAAAATCAGTGTCAGGGGAGGAGAGAGGGAGCAGGGAAAAGT	19	-	47847980-47848029		UI-H-FL1-bfz-b-04-0-UI.s1 NCI_CGAP_FL1 Homo sapiens cDNA clone UI-H-FL1-bfz-b-04-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_938194.1	ILMN_38742	LOC127602	XM_938194.2	XM_938194.2		127602	113412645	XM_938194.2	LOC127602	XP_943287.2	ILMN_1705177	0001710403	S	12178	GGAGCACAGGGGTATGGACTGCCCGCCTAAGTTTGCTTTTTGCCTCTATC				1q42.12a-q42.12b	PREDICTED: Homo sapiens hypothetical protein LOC127602 (LOC127602), mRNA.					
Homo sapiens	RefSeq	XM_943105.1	ILMN_138381	LOC647417	XM_943105.1	XM_943105.1		647417	89035871	XM_943105.1	LOC647417	XP_948198.1	ILMN_1692996	0005890243	I	758	CTTGGCCTCGTGTGCCTCCAGGATTCCCCCTCCAGATGCCTTTGTACTCA					PREDICTED: Homo sapiens similar to CG8355-PA, isoform A, transcript variant 2 (LOC647417), mRNA.					
Homo sapiens	RefSeq	XM_001716337.1	ILMN_336009	LOC100131199	XM_001716337.1	XM_001716337.1		100131199	169171976	XM_001716337.1	LOC100131199	XP_001716389.1	ILMN_3276909	0006280600	M	342	CTTCTGCATCATTTCACTGTGCACCTGTGTGGCCGGGATCAACTTTGAGC				7q34d	PREDICTED: Homo sapiens hypothetical LOC100131199 (LOC100131199), mRNA.					
Homo sapiens	RefSeq	NM_147196.1	ILMN_533	TMIE	NM_147196.1	NM_147196.1		259236	22218346	NM_147196.1	TMIE	NP_671729.1	ILMN_1726745	0005390692	S	1525	GCAGGGCCTTCTGCCTGCTGACCATAACAGTGCCAGCTTCTTTGCAGCTT	3	+	46727081-46727130	3p21.31h	Homo sapiens transmembrane inner ear (TMIE), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]		DFNB6	DFNB6
Homo sapiens	RefSeq	NM_020774.2	ILMN_5164	MIB1	NM_020774.2	NM_020774.2		57534	62868229	NM_020774.2	MIB1	NP_065825.1	ILMN_1788832	0004810368	S	8699	GTGTCCACATCTAGAAGGCTCTCATTGCAGTTGTTTACAGTTAAGGTACC	18	+	17704303-17704352	18q11.2a	Homo sapiens mindbomb homolog 1 (Drosophila) (MIB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IEA]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of endocytosis [goid 45807] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129659; ZZZ6; ZZANK2; MGC129660; FLJ90676; DIP-1; DKFZp686I0769; MIB; DKFZp761M1710	MGC129659; ZZZ6; ZZANK2; MGC129660; FLJ90676; DIP-1; DKFZp686I0769; MIB; DKFZp761M1710
Homo sapiens	RefSeq	NM_003775.1	ILMN_15309	S1PR4	NM_003775.2	NM_003775.2		8698	85797653	NM_003775.2	S1PR4	NP_003766.1	ILMN_1784737	0003370075	S	1163	AGCGTGCGGAGCATCTGAAGTTGCAGTCTTGCGTGTGGATGGTGCAGCCA	19	+	3130928-3130945:3130946-3130977	19p13.3f	Homo sapiens sphingosine-1-phosphate receptor 4 (S1PR4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9790765] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9790765] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9790765] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 10679247] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10679247] [evidence TAS]	Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [pmid 10679247] [evidence TAS]	SLP4; LPC1; S1P4; S1PR4	SLP4; LPC1; S1PR4
Homo sapiens	RefSeq	XR_038102.1	ILMN_351097	LOC100132411	XR_038102.1	XR_038102.1		100132411	169169996	XR_038102.1	LOC100132411		ILMN_3248180	0000290017	S	736	CATTGGCCTCTCTCACGCTGAGGGAGGTCAGCGTGAGGCCCTGCCTCACA	7	-	56858073-56858097:56858242-56858266	7p11.2a	PREDICTED: Homo sapiens misc_RNA (LOC100132411), miscRNA.					
Homo sapiens	RefSeq	XM_926111.1	ILMN_7111	FAM75A7	NM_015667.2	NM_015667.2		26165	153791825	NM_015667.2	FAM75A7	NP_056482.2	ILMN_1772728	0003370239	S	1898	GATGCAGCTTCGGGATGAATCACCAGGGACAAGTCAGGCCAAGGGCAAAC	9	-	65505641-65505690	9q12f	Homo sapiens family with sequence similarity 75, member A7 (FAM75A7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			AEP1; C9orf36A	
Homo sapiens	RefSeq	XM_927799.1	ILMN_38887	LOC644705	XM_927799.1	XM_927799.1		644705	89060503	XM_927799.1	LOC644705	XP_932892.1	ILMN_1760334	0003170626	S	477	GGCCCATCCAGTCAGACAGAAGCAGTATCCAGTCCCTAGAAAAGCTCTGG	X	+	119532-119581		PREDICTED: Homo sapiens hypothetical protein LOC644705 (LOC644705), mRNA.					
Homo sapiens	RefSeq	XM_001133423.1	ILMN_176834	LOC729289	XM_001133423.1	XM_001133423.1		729289	113428086	XM_001133423.1	LOC729289	XP_001133423.1	ILMN_3299716	0001690286	M	1640	CCACCTGGCCAAAACTGAAAATGTCAGCCCCGCCCATAACTTCAACAGAG	19	+	12319402-12319451	19p13.2a	PREDICTED: Homo sapiens hypothetical LOC729289 (LOC729289), mRNA.					
Homo sapiens	RefSeq	NM_015069.2	ILMN_164805	ZNF423	NM_015069.2	NM_015069.2		23090	46359074	NM_015069.2	ZNF423	NP_055884.2	ILMN_1763602	0006450491	S	4048	CGTGCACGGGCAGGAGGACAAGATCTACGACTGCTCACAGTGCCCTCAGA	16	-	49557560-49557609	16q12.1b-q12.1c	Homo sapiens zinc finger protein 423 (ZNF423), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10660046] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10660046] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 10660046] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10660046] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10660046] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	OAZ; ZFP423; Roaz; MGC138522; MGC138520; Ebfaz; Zfp104; KIAA0760	OAZ; ZFP423; Roaz; MGC138522; MGC138520; Ebfaz; Zfp104; KIAA0760
Homo sapiens	RefSeq	NM_015069.2	ILMN_164805	ZNF423	NM_015069.2	NM_015069.2		23090	46359074	NM_015069.2	ZNF423	NP_055884.2	ILMN_2154950	0004280450	S	4365	CCTGCTACAGCTAGTGTGCTTTTAGACTTTCCGCCGCAGACTACATTTCT	16	-	49524924-49524973	16q12.1b-q12.1c	Homo sapiens zinc finger protein 423 (ZNF423), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10660046] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10660046] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 10660046] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10660046] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10660046] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	OAZ; ZFP423; Roaz; MGC138522; MGC138520; Ebfaz; Zfp104; KIAA0760	OAZ; ZFP423; Roaz; MGC138522; MGC138520; Ebfaz; Zfp104; KIAA0760
Homo sapiens	RefSeq	NM_182660.1	ILMN_14796	UTY	NM_182660.1	NM_182660.1		7404	33188428	NM_182660.1	UTY	NP_872601.1	ILMN_1651456	0005270068	I	4252	AAAAATGTAAGCAAAATTACAGTATGTAAAACACACATTGCTAATGGAGA	Y	-	15434937-15434986	Yq11.21b	Homo sapiens ubiquitously transcribed tetratricopeptide repeat gene, Y-linked (UTY), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	UTY1; DKFZp686L12190	UTY1; DKFZp686L12190
Homo sapiens	RefSeq	NM_032646.5	ILMN_25738	TTYH2	NM_032646.5	NM_032646.5		94015	53988384	NM_032646.5	TTYH2	NP_116035.5	ILMN_2238132	0006980647	I	569	AGCGTTGTTGTTCAGCTCTCAGGACTGCCCGTGTGGAGGGAGGTCACCAT	17	+	69745151-69745200	17q25.1b	Homo sapiens tweety homolog 2 (Drosophila) (TTYH2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	C17orf29; MGC4837; MGC126172	C17orf29; MGC4837; MGC126172
Homo sapiens	RefSeq	NM_052869.1	ILMN_25738	TTYH2	NM_032646.5	NM_032646.5		94015	53988384	NM_032646.5	TTYH2	NP_116035.5	ILMN_1695829	0001690053	A	3118	TGGACAGCAGGGTGTTCTCAGCTCCCAGCGAAGCCTCCACAACAGAATGG	17	+	69769425-69769474	17q25.1b	Homo sapiens tweety homolog 2 (Drosophila) (TTYH2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	C17orf29; MGC4837; MGC126172	C17orf29; MGC4837; MGC126172
Homo sapiens	RefSeq	XM_939422.1	ILMN_36875	LOC650342	XM_939422.1	XM_939422.1		650342	89047314	XM_939422.1	LOC650342	XP_944515.1	ILMN_1664157	0005700452	S	1225	CTCCTGCTCTCCACGGTCCTACCCCCGCATTGTCAGGCATTGGCAACTTA					PREDICTED: Homo sapiens hypothetical protein LOC650342 (LOC650342), mRNA.					
Homo sapiens	RefSeq	NM_024658.3	ILMN_26191	IPO4	NM_024658.3	NM_024658.3		79711	62460636	NM_024658.3	IPO4	NP_078934.3	ILMN_1798172	0004830500	S	3169	CTGACCAGGTTATAGATGTGGCTCCCGAGCTTCTGCGTATCTGCAGCCTC	14	-	24649922-24649964:24650719-24650725	14q12a	Homo sapiens importin 4 (IPO4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 11823430] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	MGC131665; FLJ23338; Imp4	MGC131665; FLJ23338; Imp4
Homo sapiens	RefSeq	NM_002037.3	ILMN_5919	FYN	NM_002037.3	NM_002037.3		2534	23510344	NM_002037.3	FYN	NP_002028.1	ILMN_2249920	0006290725	I	1298	GCCGCCTAGTAGTTCCCTGTCACAAAGGGATGCCAAGGCTTACCGATCTG	6	-	112142316-112142339:112147701-112147726	6q21i	Homo sapiens FYN oncogene related to SRC, FGR, YES (FYN), transcript variant 1, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 15611048] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10858437] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15611048] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7822789] [evidence NAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 7822789] [evidence NAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 1361685] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [pmid 1361685] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [pmid 8264796] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [pmid 7722293] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 7822789] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14993658] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC45350; SYN; SLK	MGC45350; SYN; SLK
Homo sapiens	RefSeq	XM_942822.2	ILMN_30696	LOC646626	XM_942822.2	XM_942822.2		646626	113412233	XM_942822.2	LOC646626	XP_947915.1	ILMN_3199658	0000540097	A	603	TCACAGCAAGGGATTCTGATGTTTACATTATGTCCTGTTTCCATGTTGAC				1p22.3e	PREDICTED: Homo sapiens hypothetical LOC646626 (LOC646626), mRNA.					
Homo sapiens	RefSeq	NM_003302.1	ILMN_17386	TRIP6	NM_003302.2	NM_003302.2		7205	91208422	NM_003302.2	TRIP6	NP_003293.2	ILMN_1713990	0003130612	S	1441	GTTTTCACATTGGCTGTTACAAGTGCGAGGAGTGTGGGCTGCTGCTCTCC	7	+	100308274-100308302:100308730-100308750	7q22.1c	Homo sapiens thyroid hormone receptor interactor 6 (TRIP6), mRNA.	Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 14688263] [evidence IDA]; A protein complex that binds interleukin-1; comprises an alpha and a beta subunit [goid 45323] [pmid 15657077] [evidence IDA]	The release of NF-kappaB from specific molecules in the cytoplasm to which it was bound, thereby allowing its translocation into the nucleus [goid 8588] [pmid 15657077] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 14688263] [evidence IMP]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [pmid 14688263] [evidence NAS]	Interacting selectively with the interleukin-1 receptor [goid 5149] [pmid 15657077] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a kinase, any enzyme that catalyzes the transfer of a phosphate group [goid 19900] [pmid 15657077] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 9598321] [evidence NAS]	MGC29959; MGC3837; MGC10556; OIP1; ZRP-1; MGC4423; MGC10558	MGC29959; MGC3837; MGC10556; OIP1; ZRP-1; MGC4423; MGC10558
Homo sapiens	Unigene	Hs.577755	ILMN_129936	HS.577755	Hs.577755		Hs.577755		7039667	AW469561			ILMN_1857995	0001030544	S	416	CTCACGCTGGGAGGTGCTAAGGGGGTGTCAGGAACAGCCAAGGAACATCT	12	-	50503555-50503604		hd19h02.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2910003 3, mRNA sequence					
Homo sapiens	RefSeq	XM_942147.1	ILMN_38271	LOC649641	XM_942147.1	XM_942147.1		649641	88947692	XM_942147.1	LOC649641	XP_947240.1	ILMN_1743454	0002640692	S	835	TGTGGAGCCCAGAAGGGAGCAGGGGTCGGGCTAGAGACACCGCAATGATT					PREDICTED: Homo sapiens hypothetical protein LOC649641 (LOC649641), mRNA.					
Homo sapiens	RefSeq	XM_939136.1	ILMN_137803	LOC647881	XM_939136.1	XM_939136.1		647881	88947616	XM_939136.1	LOC647881	XP_944229.1	ILMN_1740590	0000380427	I	216	CTCTGCTGCCCCATGGGGCACCGGGGCTCAGGAAGGTGCCAGGACAGTTG					PREDICTED: Homo sapiens similar to Absent in melanoma 1 protein, transcript variant 1 (LOC647881), mRNA.					
Homo sapiens	RefSeq	NM_001004019.1	ILMN_181536	FBLN2	NM_001004019.1	NM_001004019.1		2199	51873052	NM_001004019.1	FBLN2	NP_001004019.1	ILMN_1721769	0000780025	I	2318	CCGGCGACAGTTCTGTGTGAACACCCTGGGATCCTTCTACTGTGTCAACC	3	+	13612616-13612665	3p25.1b	Homo sapiens fibulin 2 (FBLN2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 7806230] [evidence TAS]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 7806230] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 7806230] [evidence TAS]		
Homo sapiens	RefSeq	NM_005684.2	ILMN_18020	GPR52	NM_005684.3	NM_005684.3		9293	142351024	NM_005684.3	GPR52	NP_005675.2	ILMN_1671929	0000430598	S	907	CCCGGGTCTTGGACAATCCAACTCTGTCCTTCTTAACAACCTGGCTTGCA	1	+	172684741-172684790	1q25.1a	Homo sapiens G protein-coupled receptor 52 (GPR52), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9931487] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9931487] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC111751	MGC111751
Homo sapiens	RefSeq	NM_012443.2	ILMN_173595	SPAG6	NM_012443.2	NM_012443.2		9576	27262639	NM_012443.2	SPAG6	NP_036575.1	ILMN_1772458	0000620438	I	1460	CTGCCGCATGATAGCAAAGCTCGACGACTTTTTGTAACAAGTGGTGGCCT	10	+	22680707-22680756	10p12.31a	Homo sapiens sperm associated antigen 6 (SPAG6), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [pmid 10493827] [evidence TAS]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [pmid 10493827] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC26276; Repro-SA-1; DKFZp434I153; pf16	MGC26276; Repro-SA-1; DKFZp434I153; pf16
Homo sapiens	RefSeq	NM_012248.2	ILMN_167921	SEPHS2	NM_012248.2	NM_012248.2		22928	24797146	NM_012248.2	SEPHS2	NP_036380.2	ILMN_1687824	0002030736	S	2111	CCCTCTAAACCCCATTAAGGACTGGGAGAGGCAGAGCAAGCCTCAGAGCC	16	-	30455064-30455113	16p11.2c	Homo sapiens selenophosphate synthetase 2 (SEPHS2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of selenocysteine, an essential component of glutathione peroxidase and some other proteins [goid 16260] [pmid 8986768] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + selenide + H2O = AMP + selenophosphate + phosphate [goid 4756] [pmid 8986768] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SPS2	SPS2
Homo sapiens	RefSeq	NM_176871.2	ILMN_163097	PDLIM2	NM_176871.2	NM_176871.2		64236	40288187	NM_176871.2	PDLIM2	NP_789847.1	ILMN_1770248	0005870398	I	4394	CTCTCTGCCTGTGAGAAGCGGAATGGGTACTGTCTAGGAGGACTGGGCAG	8	+	22455321-22455370	8p21.3a	Homo sapiens PDZ and LIM domain 2 (mystique) (PDLIM2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SLIM; FLJ34715	SLIM; FLJ34715
Homo sapiens	RefSeq	NM_032848.1	ILMN_22595	C12ORF52	NM_032848.1	NM_032848.1		84934	14249569	NM_032848.1	C12orf52	NP_116237.1	ILMN_1667857	0004900753	S	1504	CTCTCCAGCCCTGTCTCAACCATACTCCAAATTAGTGCCAACCCAGGGGC	12	+	112114231-112114280	12q24.13b	Homo sapiens chromosome 12 open reading frame 52 (C12orf52), mRNA.				FLJ14827	FLJ14827
Homo sapiens	Unigene	Hs.553349	ILMN_111354	HS.553349	Hs.553349		Hs.553349		24721447	CA390412			ILMN_1875338	0003610634	S	405	GCTAGGTCTTGGTGACTTTCAAGTTCTGTTGGGGAGGAGGGTAGGCATGC					cs10c05.x1 Human Retinal pigment epithelium/choroid cDNA (Un-normalized, unamplified): cs Homo sapiens cDNA clone cs10c05 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014365.2	ILMN_22076	HSPB8	NM_014365.2	NM_014365.2		26353	38016940	NM_014365.2	HSPB8	NP_055180.1	ILMN_1791280	0006180259	S	1819	GTCTCCAGACAGCTCCATCAGGAACCAAGCAAAGGCCAGATAGCCTGACA	12	+	118116751-118116800	12q24.23b	Homo sapiens heat shock 22kDa protein 8 (HSPB8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10833516] [evidence NAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14594798] [evidence IPI]	HMN2; E2IG1; HMN2A; H11; DHMN2; HSP22; CMT2L	HMN2; E2IG1; HMN2A; H11; DHMN2; HSP22; CMT2L
Homo sapiens	RefSeq	XM_937534.1	ILMN_45425	LOC648487	XM_937534.1	XM_937534.1		648487	89035106	XM_937534.1	LOC648487	XP_942627.1	ILMN_1721654	0003310082	S	51	GAGAAATCCTTGTGCTCCAAACAGACATGATCCTCCTGAAGAAGAGACGG					PREDICTED: Homo sapiens similar to caspase 1 isoform alpha precursor (LOC648487), mRNA.					
Homo sapiens	RefSeq	XM_927510.1	ILMN_138343	LOC644345	XM_927510.1	XM_927510.1		644345	89031675	XM_927510.1	LOC644345	XP_932603.1	ILMN_1758196	0006580162	S	3	ACCTCTGCCATTGCCCCAGCTAAGCAGCGAGAGCTTGCTGAAGCCCAGAG	10	+	135117430-135117479		PREDICTED: Homo sapiens similar to scavenger receptor cysteine-rich type 1 protein CD163c-alpha (LOC644345), mRNA.					
Homo sapiens	RefSeq	NM_152568.1	ILMN_139091	FLJ25169	NM_152568.1	NM_152568.1		157848	22749178	NM_152568.1	FLJ25169	NP_689781.1	ILMN_1656250	0007100538	S	1282	TGGGAAAGACCCCAGAACGGCACCCCTCCAACAAGGCAGGAAGGGAGAAG	8	-	41622162-41622211	8p11.21b	Homo sapiens hypothetical protein FLJ25169 (FLJ25169), mRNA.					
Homo sapiens	RefSeq	NM_001012959.1	ILMN_27562	DISC1	NM_001012959.1	NM_001012959.1		27185	61742828	NM_001012959.1	DISC1	NP_001012977.1	ILMN_1676632	0001300246	I	2082	CTTGCCTGAGGACAGCCTGCAGGACACAGCACTGTGATTTGAACCCAGAG	1	+	230068939-230068947:230068948-230068988	1q42.2a-q42.2b	Homo sapiens disrupted in schizophrenia 1 (DISC1), transcript variant S, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15094396] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]	SCZD9; KIAA0457	SCZD9; KIAA0457
Homo sapiens	RefSeq	XM_944447.1	ILMN_35352	LOC645722	XM_944447.2	XM_944447.2		645722	113427524	XM_944447.2	LOC645722	XP_949540.2	ILMN_1662751	0003870731	S	245	ACACGACCCCGAGCGGAGAGGGGGCGCCCTCCTTCTCCCGCGCCCAGAGG				17q23.2b	PREDICTED: Homo sapiens similar to hCG2037003 (LOC645722), mRNA.					
Homo sapiens	RefSeq	NM_002162.2	ILMN_9707	ICAM3	NM_002162.2	NM_002162.2		3385	12545399	NM_002162.2	ICAM3	NP_002153.1	ILMN_2212763	0005550278	S	1483	TTCGTGGCGGTGTTACTGACCCTGGGCGTGGTGACTATCGTACTGGCCTT	19	-	10305661-10305710	19p13.2c	Homo sapiens intercellular adhesion molecule 3 (ICAM3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11857637] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1448173] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8459213] [evidence TAS]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [pmid 1448174] [evidence TAS]	ICAM-R; CD50; CDW50	ICAM-R; CD50; CDW50
Homo sapiens	RefSeq	NM_024770.1	ILMN_8706	METTL8	NM_024770.2	NM_024770.2		79828	141801636	NM_024770.2	METTL8	NP_079046.1	ILMN_1653980	0001440397	S	1937	GGCTATTCTTAGATATACAAGTTGTTAGGCCAGGTGCAATGGCTCGCACC	2	-	171888266-171888315	2q31.1c	Homo sapiens methyltransferase like 8 (METTL8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ42098; TIP; FLJ13984	FLJ42098; TIP; FLJ13984
Homo sapiens	RefSeq	XR_037304.1	ILMN_347566	LOC100129960	XR_037304.1	XR_037304.1		100129960	169172527	XR_037304.1	LOC100129960		ILMN_3191030	0002750767	A	1014	AGTGAGACTGCTGAAAAACAGCTCTGCAGCCAGAAATGGTCTTCTCACGG				8q13.3a	PREDICTED: Homo sapiens misc_RNA (LOC100129960), miscRNA.					
Homo sapiens	RefSeq	XM_001715232.1	ILMN_335451	LOC729568	XM_001715232.1	XM_001715232.1		729568	169215608	XM_001715232.1	LOC729568	XP_001715284.1	ILMN_3221287	0006330228	A	452	TGGCTGTGCACCCCAACAAAGTGTTGATGAAGGAGAAGAGTGAGTTGATG	22	+	20054944-20054949:20055438-20055481	22q11.21f	PREDICTED: Homo sapiens similar to hCG2042705 (LOC729568), mRNA.					
Homo sapiens	RefSeq	NM_198552.1	ILMN_21686	FAM89A	NM_198552.1	NM_198552.1		375061	38348389	NM_198552.1	FAM89A	NP_940954.1	ILMN_1712859	0000650730	I	268	CGCCAAGCCTCCCAACCTGGACGCCGCTCTGGCGCTGCTCCGCAAAGAGA	1	-	229242291-229242340	1q42.2a	Homo sapiens family with sequence similarity 89, member A (FAM89A), mRNA.				RP11-423F24.2; C1orf153; MGC15887	RP11-423F24.2; C1orf153; MGC15887
Homo sapiens	RefSeq	NM_198552.1	ILMN_21686	FAM89A	NM_198552.1	NM_198552.1		375061	38348389	NM_198552.1	FAM89A	NP_940954.1	ILMN_1652677	0004040242	A	695	CAGGGGATGAGCGCTACCAGTTTCATTTGTAGGCAGGGAGTTCTCCGCGG	1	-	229222070-229222119	1q42.2a	Homo sapiens family with sequence similarity 89, member A (FAM89A), mRNA.				RP11-423F24.2; C1orf153; MGC15887	RP11-423F24.2; C1orf153; MGC15887
Homo sapiens	RefSeq	NM_198552.1	ILMN_21686	FAM89A	NM_198552.1	NM_198552.1		375061	38348389	NM_198552.1	FAM89A	NP_940954.1	ILMN_2285817	0007400747	I	876	GATCTCGGTGAAAGGCCTTAGTGGGTGTTTTGTGTGAGGTGGCTTGTAGC	1	-	229221889-229221938	1q42.2a	Homo sapiens family with sequence similarity 89, member A (FAM89A), mRNA.				RP11-423F24.2; C1orf153; MGC15887	RP11-423F24.2; C1orf153; MGC15887
Homo sapiens	RefSeq	NM_001001417.4	ILMN_498	TBC1D3B	NM_001001417.4	NM_001001417.4		414059	94557309	NM_001001417.4	TBC1D3B	NP_001001417.4	ILMN_2153679	0000630762	S	1535	ATTCCGACCAGGGCACCCCCTTCAGAGCTAGGGACGAACAGCCGTGTGCT	17	-	31517652-31517701	17q12b	Homo sapiens TBC1 domain family, member 3B (TBC1D3B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	PRC17	PRC17
Homo sapiens	RefSeq	NM_012103.2	ILMN_11991	AUP1	NM_012103.2	NM_012103.2		550	32313582	NM_012103.2	AUP1	NP_036235.1	ILMN_1756852	0001990632	I	556	TGGAGGATACTGAGGCCTTACCCCTAACCCCGATCCTCTACCCAACATGT	2	-	74609631-74609680	2p13.1b	Homo sapiens ancient ubiquitous protein 1 (AUP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]				
Homo sapiens	RefSeq	NM_147157.1	ILMN_4320	SIGMAR1	NM_147157.1	NM_147157.1		10280	22212933	NM_147157.1	SIGMAR1	NP_671513.1	ILMN_3229733	0004050438	A	1103	AGAGGAGCTGCCTTTTGGAGGCCCCCTTCACCTGCAGCTATGATGCCCTT	9	-	34635129-34635178	9p13.3c	Homo sapiens sigma non-opioid intracellular receptor 1 (SIGMAR1), transcript variant 2, mRNA.				SIGMAR1; MGC3851; FLJ25585; SR-BP1	SIGMAR1; MGC3851; FLJ25585; SR-BP1
Homo sapiens	RefSeq	NM_147160.2	ILMN_4320	SIGMAR1	NM_147157.1	NM_147157.1		10280	22212933	NM_147157.1	SIGMAR1	NP_671513.1	ILMN_1717925	0000510136	A	1206	ATGCAAGTGCCCCTGTGGCTTGTCCCCAACCCCCTCAGCAACAAAGCTCA	9	-	34635026-34635075	9p13.3c	Homo sapiens sigma non-opioid intracellular receptor 1 (SIGMAR1), transcript variant 2, mRNA.				SIGMAR1; MGC3851; FLJ25585; SR-BP1	SIGMAR1; MGC3851; FLJ25585; SR-BP1
Homo sapiens	RefSeq	XR_017098.2	ILMN_174041	LOC646344	XR_017098.2	XR_017098.2		646344	169172826	XR_017098.2	LOC646344		ILMN_3243019	0007570372	S	45	GACCTGGGCCCAGCTAAAGAAGCTGACACAGTTAGCTGAAAAAAGCCTGG	8	-	12363750-12363799	8p23.1a	PREDICTED: Homo sapiens similar to hCG2042391 (LOC646344), mRNA.					
Homo sapiens	RefSeq	XM_933391.1	ILMN_34524	LOC644322	XM_933391.1	XM_933391.1		644322	89029452	XM_933391.1	LOC644322	XP_938484.1	ILMN_1684922	0006980220	I	430	GTTGATGCCAGTTGATCTGAAGGTCCCAGCAAGGAGCCGACTCACAGAAG	9	-	66944287-66944336		PREDICTED: Homo sapiens similar to Ribosome biogenesis protein BMS1 homolog, transcript variant 2 (LOC644322), mRNA.					
Homo sapiens	RefSeq	NR_031621.1	ILMN_388547	MIR1289-2	NR_031621.1	NR_031621.1		100302134	269847148	NR_031621.1	MIR1289-2		ILMN_3308535	0000990482	S	16	AAAGGCACATTCCTAGACCCTGCCTCAGAACTACTGAACAGAGTCACTGG					Homo sapiens microRNA 1289-2 (MIR1289-2), microRNA.					
Homo sapiens	RefSeq	NM_031852.1	ILMN_2044	PCDHA7	NM_031852.1	NM_031852.1		56141	14165418	NM_031852.1	PCDHA7	NP_114040.1	ILMN_1713024	0005860397	A	2178	GTCCTCTGAGGGCGCATGTAGTTTGGTAAAGCCCACTCTGGTGTGCTCCA	5	+	140196330-140196379	5q31.3b	Homo sapiens protocadherin alpha 7 (PCDHA7), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-ALPHA7; CRNR4; CNR4; CNRN4; CNRS4	PCDH-ALPHA7; CRNR4; CNR4; CNRN4; CNRS4
Homo sapiens	RefSeq	XM_935588.1	ILMN_45490	LOC641848	XM_935588.1	XM_935588.1		641848	89027387	XM_935588.1	LOC641848	XP_940681.1	ILMN_1679025	0002640255	S	213	AGGTGCTAAAGTTGAACGAGCTGAGGGATATGAACCACCAGTCCAAGAAT					PREDICTED: Homo sapiens similar to ribosomal protein S3a (LOC641848), mRNA.					
Homo sapiens	RefSeq	NM_015463.1	ILMN_1437	C2ORF32	NM_015463.1	NM_015463.1		25927	24308070	NM_015463.1	C2orf32	NP_056278.1	ILMN_2182148	0002350142	S	1097	GGCCCTGGCAGGCTTGTCCTGCTCTTGACCATTCCACTGACTAACTTTGG	2	-	68374157-68374206	2p14a	Homo sapiens chromosome 2 open reading frame 32 (C2orf32), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16696853] [evidence IPI]	DKFZp566K1924	DKFZp566K1924
Homo sapiens	RefSeq	NM_012242.2	ILMN_22862	DKK1	NM_012242.2	NM_012242.2		22943	61676924	NM_012242.2	DKK1	NP_036374.1	ILMN_2174189	0004880609	S	1364	TCTAGAGTCTAGAACGCAAGGATCTCTTGGAATGACAAATGATAGGTACC	10	+	53746982-53747031	10q21.1a	Homo sapiens dickkopf homolog 1 (Xenopus laevis) (DKK1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16263759] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10383463] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 10383463] [evidence TAS]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [pmid 16263759] [evidence IDA]	DKK-1; SK	DKK-1; SK
Homo sapiens	RefSeq	NM_012242.2	ILMN_22862	DKK1	NM_012242.2	NM_012242.2		22943	61676924	NM_012242.2	DKK1	NP_036374.1	ILMN_1773337	0005570102	S	1093	CCTGGAGTGTAAGAGCTTTGTTTCTTTATGGAACTCCCCTGTGATTGCAG	10	+	53746711-53746760	10q21.1a	Homo sapiens dickkopf homolog 1 (Xenopus laevis) (DKK1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16263759] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10383463] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 10383463] [evidence TAS]; Interacting selectively with a low density lipoprotein receptor [goid 50750] [pmid 16263759] [evidence IDA]	DKK-1; SK	DKK-1; SK
Homo sapiens	RefSeq	NM_020441.2	ILMN_26478	CORO1B	NM_020441.2	NM_020441.2		57175	65787330	NM_020441.2	CORO1B	NP_065174.1	ILMN_2377019	0003780451	A	1465	AAGCTGGAGGAGGTGATGCAGGAGCTGCGGGCCCTGAGGGCGCTGGTCAA	11	-	67205913-67205962	11q13.1f	Homo sapiens coronin, actin binding protein, 1B (CORO1B), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17350576] [evidence IPI]	CORONIN-2; DKFZP762I166	CORONIN-2; DKFZP762I166
Homo sapiens	RefSeq	XM_928022.1	ILMN_40929	LOC644935	XM_928022.1	XM_928022.1		644935	88953850	XM_928022.1	LOC644935	XP_933115.1	ILMN_1795856	0002760424	S	1427	AGTTGGCTCTGGCCTTTTGCTATAACATGCCTGTGTCACTCAGCCGTGGC	2	-	186118974-186119023	2q32.1d	PREDICTED: Homo sapiens similar to E74-like factor 2 (ets domain transcription factor) isoform 1 (LOC644935), mRNA.					
Homo sapiens	RefSeq	NM_017793.1	ILMN_26499	RPP25	NM_017793.2	NM_017793.2		54913	93277073	NM_017793.2	RPP25	NP_060263.2	ILMN_1695271	0000670598	S	1769	GGGACCCCCAAGGGTTAAAGCCACCCAGCATTCACGAAGAGCACCTGAAG	15	-	75247957-75248006	15q24.1b	Homo sapiens ribonuclease P/MRP 25kDa subunit (RPP25), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15096576] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ20374	FLJ20374
Homo sapiens	RefSeq	NR_003558.1	ILMN_309643	WBP11P1	NR_003558.1	NR_003558.1		441818	148229010	NR_003558.1	WBP11P1		ILMN_3251375	0003710037	S	2855	GTCTAGAGTCAAATGAATGCCTCTCACTACCAACAGGGTGGAGCAGTTCC	18	+	28348478-28348527	18q12.1e	Homo sapiens WW domain binding protein 11 pseudogene 1 (WBP11P1), non-coding RNA.				HsT3017	HsT3017
Homo sapiens	RefSeq	XM_929766.1	ILMN_309643	WBP11P1	NR_003558.1	NR_003558.1		441818	148229010	NR_003558.1	WBP11P1		ILMN_1673495	0006520411	S	590	GTGGAGAGTATTCCTTTACCAGATATGCCACATGCTTCTTCTAACATTTT	18	+	28346213-28346262	18q12.1e	Homo sapiens WW domain binding protein 11 pseudogene 1 (WBP11P1), non-coding RNA.				HsT3017	
Homo sapiens	RefSeq	XM_929769.1	ILMN_309643	WBP11P1	NR_003558.1	NR_003558.1		441818	148229010	NR_003558.1	WBP11P1		ILMN_1660999	0004010523	S	1128	AAAAAACCATGAAGGAACTGACTCCTCTTCAAGCCACGATGCTTCGTATG	18	+	28346751-28346800	18q12.1e	Homo sapiens WW domain binding protein 11 pseudogene 1 (WBP11P1), non-coding RNA.				HsT3017	
Homo sapiens	RefSeq	XM_929771.1	ILMN_309643	WBP11P1	NR_003558.1	NR_003558.1		441818	148229010	NR_003558.1	WBP11P1		ILMN_1782994	0004250397	A	1721	ATGCACCCAGCTTTGGTACCTCCCCTTGGGATCTGCCCCCCTGGGCTTTT	18	+	28347344-28347393	18q12.1e	Homo sapiens WW domain binding protein 11 pseudogene 1 (WBP11P1), non-coding RNA.				HsT3017	
Homo sapiens	RefSeq	XM_946371.1	ILMN_498	TBC1D3B	NM_001001417.5	NM_001001417.5		414059	149999612	NM_001001417.5	TBC1D3B	NP_001001417.5	ILMN_1657247	0005420280	S	172	GGTAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAA	17	-	34502339-34502388	17q12b	Homo sapiens TBC1 domain family, member 3B (TBC1D3B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	FLJ78399; PRC17	
Homo sapiens	RefSeq	XM_935245.1	ILMN_498	TBC1D3B	NM_001001417.5	NM_001001417.5		414059	149999612	NM_001001417.5	TBC1D3B	NP_001001417.5	ILMN_1674587	0000070367	A	591	GGACATAAGCGGGACATTAAGGAAGCATATGTTCTTCAGGGATCGATACG	17	-	34499220-34499269	17q12b	Homo sapiens TBC1 domain family, member 3B (TBC1D3B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	FLJ78399; PRC17	
Homo sapiens	RefSeq	NM_001006109.1	ILMN_184118	C3ORF37	NM_001006109.1	NM_001006109.1		56941	54607105	NM_001006109.1	C3orf37	NP_001006109.1	ILMN_1696597	0001570010	I	187	CCGCTCCGGGGAGCAGAGTCCGGAGCGGGATCCGCGGCCCACAGGTTCGC	3	+	128998003-128998052	3q21.3c	Homo sapiens chromosome 3 open reading frame 37 (C3orf37), transcript variant 1, mRNA.				DC12; MGC111075	MGC111075; DC12
Homo sapiens	RefSeq	XM_939494.1	ILMN_40589	LOC654032	XM_939494.1	XM_939494.1		654032	89061033	XM_939494.1	LOC654032	XP_944587.1	ILMN_1704812	0004120451	I	3	GATGGGAGCTCCAAATCTGATATCAGATAATTTAGATTGTGGACTTAGTT					PREDICTED: Homo sapiens similar to DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26, transcript variant 1 (LOC654032), mRNA.					
Homo sapiens	RefSeq	XM_001722133.1	ILMN_339644	LOC100129441	XM_001722133.1	XM_001722133.1		100129441	169172378	XM_001722133.1	LOC100129441	XP_001722185.1	ILMN_3182020	0002490619	A	951	CGTCGAGCACAAAGGAGTCAAAAATTGATCAGGGCTGGGTGTGGTGGCTC				8p23.1b	PREDICTED: Homo sapiens hypothetical protein LOC100129441 (LOC100129441), mRNA.					
Homo sapiens	RefSeq	XM_001131805.2	ILMN_170137	LOC729505	XM_001131805.2	XM_001131805.2		729505	169165898	XM_001131805.2	LOC729505	XP_001131805.2	ILMN_3298829	0003400132	M	689	CCCTGACTTTGACACAGATGGTCACCTTGGCACAAAAGCCTTGTAGGATG				3p22.1c	PREDICTED: Homo sapiens hypothetical LOC729505 (LOC729505), mRNA.					
Homo sapiens	RefSeq	NM_203462.1	ILMN_9584	MRFAP1L1	NM_203462.1	NM_203462.1		114932	44921607	NM_203462.1	MRFAP1L1	NP_982287.1	ILMN_1693702	0005360202	I	1	GTTGACGGCTGCGACTCCATTTTGTAGGCCGCTTATTTGTGTGCATCCAC	4	-	6762455-6762504	4p16.1f	Homo sapiens Morf4 family associated protein 1-like 1 (MRFAP1L1), transcript variant 2, mRNA.				PP784; MGC9651	PP784; MGC9651
Homo sapiens	RefSeq	NM_152301.3	ILMN_9584	MRFAP1L1	NM_203462.1	NM_203462.1		114932	44921607	NM_203462.1	MRFAP1L1	NP_982287.1	ILMN_1689774	0000050274	A	1398	TCAGGGCCTGGAAAGTCTCTTCCAGTTCATCAGGGTAGTAGACCTGTCAG	4	-	6760471-6760520	4p16.1f	Homo sapiens Morf4 family associated protein 1-like 1 (MRFAP1L1), transcript variant 2, mRNA.				PP784; MGC9651	PP784; MGC9651
Homo sapiens	RefSeq	NM_003368.4	ILMN_27387	USP1	NM_001017416.1	NM_001017416.1		7398	63053523	NM_001017416.1	USP1	NP_001017416.1	ILMN_1696975	0001170689	A	3103	GTGCCTTGATTCACTTAGAAGTGTCTCAGAAAACCTGGACAGTTCGCTTC	1	+	62689752-62689801	1p31.3d	Homo sapiens ubiquitin specific peptidase 1 (USP1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 9827704] [evidence TAS]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	UBP	UBP
Homo sapiens	RefSeq	XM_937181.1	ILMN_32467	LOC648127	XM_937181.1	XM_937181.1		648127	89037114	XM_937181.1	LOC648127	XP_942274.1	ILMN_1684314	0003870553	S	181	CTTCCGAGCCTAGGCGGCAGAGGATTACCAGGCCCCCGAGAGCACAGGGA					PREDICTED: Homo sapiens hypothetical protein LOC648127 (LOC648127), mRNA.					
Homo sapiens	Unigene	Hs.319053	ILMN_86015	HS.319053	Hs.319053		Hs.319053		13997486	BG718299			ILMN_1864512	0002370717	S	399	GCCTTTGCGCTTGCACCTCTTTGCTGTCCACTCCAATCAAGAACGGGGGC	11	+	126320105-126320154		602696288F1 NIH_MGC_97 Homo sapiens cDNA clone IMAGE:4828652 5, mRNA sequence					
Homo sapiens	RefSeq	NM_052850.2	ILMN_15252	GADD45GIP1	NM_052850.2	NM_052850.2		90480	31543414	NM_052850.2	GADD45GIP1	NP_443082.2	ILMN_1751530	0003780112	S	590	GCCTCAAGGAGGAAAAACAGAAACGGAAGAAGGAGGCGCGAGCTGCTGCA	19	-	13065075-13065124	19p13.13c	Homo sapiens growth arrest and DNA-damage-inducible, gamma interacting protein 1 (GADD45GIP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	Plinp1; MGC4667; CKBBP2; MGC4758; CRIF1; PRG6; PLINP-1	Plinp1; MGC4667; CRIF1; PRG6; CKBBP2; MGC4758; PLINP-1
Homo sapiens	Unigene	Hs.146561	ILMN_78342	HS.146561	Hs.146561		Hs.146561		27846940	BX106374			ILMN_1816948	0007650228	S	482	GTGGGAGGCTTTGGTGGATGGAGTCAGGGACAGTTATAGGTGAAAAGATG	7	-	85194778-85194827		BX106374 Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone IMAGp998H194335, mRNA sequence					
Homo sapiens	Unigene	Hs.544132	ILMN_107602	HS.544132	Hs.544132		Hs.544132		46548353	CN479485			ILMN_1857569	0002350161	S	496	AGTAGGTTTCCCTGCCCAGCCGCCCCTACACTGGACTTTCACAGGCAAGA					UI-H-ED1-axq-g-06-0-UI.s1 NCI_CGAP_ED1 Homo sapiens cDNA clone UI-H-ED1-axq-g-06-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000045.2	ILMN_19494	ARG1	NM_000045.2	NM_000045.2		383	10947138	NM_000045.2	ARG1	NP_000036.2	ILMN_1812281	0005270753	S	1327	GCCCCCATACATAGAGTGGGACTCTTGGAATCAGGAGACAAAGCTACCAC	6	+	131905348-131905397	6q23.2a	Homo sapiens arginase, liver (ARG1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 3540966] [evidence TAS]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [pmid 3540966] [evidence TAS]	Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea [goid 4053] [evidence IEA]; Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea [goid 4053] [pmid 3540966] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_001720760.1	ILMN_340280	LOC100128265	XM_001720760.1	XM_001720760.1		100128265	169216700	XM_001720760.1	LOC100128265	XP_001720812.1	ILMN_3259251	0005130026	M	252	AAGATACAAACCACGCGGATTTGACTCCATTTCAATACGGCTGGGAGTCC	X	+	145508192-145508241	Xq27.3d	PREDICTED: Homo sapiens hypothetical protein LOC100128265 (LOC100128265), mRNA.					
Homo sapiens	Unigene	Hs.563977	ILMN_116728	HS.563977	Hs.563977		Hs.563977		19707200	BM987818			ILMN_1896550	0005080059	S	95	AGTTGGGCACCCTTCGACCCTGGCAGGAAAAGCGGGGAACAGACCAGTTT	1	-	10619114-10619163		UI-H-CO0-asr-e-05-0-UI.s1 NCI_CGAP_Sub9 Homo sapiens cDNA clone IMAGE:5859561 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014037.2	ILMN_10688	SLC6A16	NM_014037.2	NM_014037.2		28968	55749588	NM_014037.2	SLC6A16	NP_054756.2	ILMN_1723287	0000620707	S	2718	CCTGCTACTTCTGGGGTGCCTGTCTCCTGGAATGGAGCTGGAGGAGCAAT	19	-	54484869-54484918	19q13.33a	Homo sapiens solute carrier family 6, member 16 (SLC6A16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11112352] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [pmid 11112352] [evidence NAS]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	NTT5	NTT5
Homo sapiens	RefSeq	NM_078625.2	ILMN_25942	VNN3	NM_078625.2	NM_078625.2		55350	66932886	NM_078625.2	VNN3	NP_523239.1	ILMN_1702842	0002450364	I	518	AAAGGAAGCCCTACTTCTGGGACCACATTTTACGACCACCTAGCTGAGTG	6	-	133094208-133094257	6q23.2b	Homo sapiens vanin 3 (VNN3), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [pmid 11491533] [evidence NAS]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	HSA238982	HSA238982
Homo sapiens	RefSeq	XM_940707.1	ILMN_172188	ANKRD30A	XM_001131823.1	XM_001131823.1		91074	113421939	XM_001131823.1	ANKRD30A	XP_001131823.1	ILMN_1796059	0005910309	A	1537	GAGAGTCTCTGTGAGACTGTTTCACAGAAGGATGTGTGTTTACCCAAGGC				10p11.21a	PREDICTED: Homo sapiens ankyrin repeat domain 30A (ANKRD30A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11280766] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11280766] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11280766] [evidence NAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11280766] [evidence NAS]		
Homo sapiens	RefSeq	NM_052997.1	ILMN_172188	ANKRD30A	XM_001131823.1	XM_001131823.1		91074	113421939	XM_001131823.1	ANKRD30A	XP_001131823.1	ILMN_1813607	0004900215	A	2399	TGATGGACATGCAAACTTTCAAAGCAGAGCCTCCCGAGAAGCCATCTGCC				10p11.21a	PREDICTED: Homo sapiens ankyrin repeat domain 30A (ANKRD30A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11280766] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11280766] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11280766] [evidence NAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11280766] [evidence NAS]		RP11-20F24.1; NY-BR-1
Homo sapiens	RefSeq	NM_144612.4	ILMN_14370	LOXHD1	NM_144612.4	NM_144612.4		125336	42734440	NM_144612.4	LOXHD1	NP_653213.4	ILMN_1801143	0004040739	S	4405	TATGAAATGACGGTGTGGACAGGGGATGTGGTTGGCGGGGGCACTGACTC	18	-	42352161-42352210	18q21.1a	Homo sapiens lipoxygenase homology domains 1 (LOXHD1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	LH2D1; FLJ32670	LH2D1; FLJ32670
Homo sapiens	RefSeq	NM_177986.2	ILMN_17707	DSG4	NM_177986.2	NM_177986.2		147409	31342522	NM_177986.2	DSG4	NP_817123.1	ILMN_1812799	0003420376	S	3150	AATGATGAGTCCAGACCTTCCCATAGGCCAAACCGTTGGCTCCACATCCC	18	+	27247448-27247497	18q12.1d	Homo sapiens desmoglein 4 (DSG4), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IEA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDHF13; LAH; CDGF13	CDHF13; LAH; CDGF13
Homo sapiens	RefSeq	NM_004625.3	ILMN_10614	WNT7A	NM_004625.3	NM_004625.3		7476	34328912	NM_004625.3	WNT7A	NP_004616.2	ILMN_1778575	0002810026	S	1520	CAGAGCCCTCAACTATTCTGTTCCACACCCAATGCTGCTCCACCCTCCCC	3	-	13871210-13871259	3p25.1b	Homo sapiens wingless-type MMTV integration site family, member 7A (WNT7A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8893824] [evidence NAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of the sex of an organism by physical differentiation [goid 7548] [pmid 9790192] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9161407] [evidence TAS]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IEA]; Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained [goid 31133] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the skin are generated and organized. Morphogenesis pertains to the creation of form. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner, sensitive and vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43589] [evidence IEA]; The reproductive developmental process whose specific outcome is the progression of structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures [goid 48608] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; Any process that activates, maintains or increases the frequency, rate or extent of synaptogenesis, the formation of a synapse [goid 51965] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 8893824] [evidence NAS]		
Homo sapiens	RefSeq	NM_003227.2	ILMN_173667	TFR2	NM_003227.3	NM_003227.3		7036	110227854	NM_003227.3	TFR2	NP_003218.2	ILMN_1724738	0001740300	S	2568	TACCCCTACACATCTCTCCACGGAGCCCAGACCCCAGCACAGATATCCAC	7	-	100218309-100218358	7q22.1c	Homo sapiens transferrin receptor 2 (TFR2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10409623] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [pmid 10409623] [evidence NAS]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [pmid 15319276] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with transferrin to initiate a change in cell activity [goid 4998] [pmid 10409623] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	HFE3; MGC126368; TFRC2	HFE3; MGC126368; TFRC2
Homo sapiens	RefSeq	NM_005656.2	ILMN_13877	TMPRSS2	NM_005656.2	NM_005656.2		7113	14602458	NM_005656.2	TMPRSS2	NP_005647.2	ILMN_1791123	0000130324	S	2822	AGCACTACTCTACCATGGTTCTGCCTCCTGGCCAAGCAGGCTGGTTTGCA	21	-	41758673-41758722	21q22.3a	Homo sapiens transmembrane protease, serine 2 (TMPRSS2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9325052] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PRSS10	PRSS10
Homo sapiens	RefSeq	XM_001717411.1	ILMN_351821	LOC100133430	XM_001717411.1	XM_001717411.1		100133430	169211852	XM_001717411.1	LOC100133430	XP_001717463.1	ILMN_3248654	0002900086	S	448	GCACACCCACTACAGCCTTTCCCACACTGTGACACTGGAGCTGGTGAGTC					PREDICTED: Homo sapiens similar to hCG1640620 (LOC100133430), mRNA.					
Homo sapiens	RefSeq	XR_039892.1	ILMN_343400	DUB4	XR_039892.1	XR_039892.1		391622	169166594	XR_039892.1	DUB4		ILMN_3262728	0001450132	M	1148	AGAGTGTGTCAAGAGGCAGGGAACCAAGAGCCCTTGGCTCTGAAGACTAA				4p16.1c	PREDICTED: Homo sapiens misc_RNA (DUB4), miscRNA.					
Homo sapiens	RefSeq	XM_936494.1	ILMN_174823	LOC642490	XR_016152.1	XR_016152.1		642490	113420680	XR_016152.1	LOC642490		ILMN_1774242	0000460035	S	203	CTCCCCAGGGTGATGAGAACAAAGAAAGGGGAACAGACCATACTCCTGTC	9	+	40803118-40803167	9p12b	PREDICTED: Homo sapiens similar to S-phase kinase-associated protein 1A (Cyclin A/CDK2-associated protein p19) (p19A) (p19skp1) (LOC642490), mRNA.					
Homo sapiens	RefSeq	NM_001008489.2	ILMN_24979	PHOSPHO2	NM_001008489.2	NM_001008489.2		493911	77404430	NM_001008489.2	PHOSPHO2	NP_001008489.1	ILMN_2152865	0000840133	S	977	ATGCCACGGAAAGGATATACCTTACAGAAAACTCTTTCCAGAATGTCTCA	2	+	170266316-170266365	2q31.1a	Homo sapiens phosphatase, orphan 2 (PHOSPHO2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: pyridoxal 5'-phosphate + H2O = pyridoxal + phosphate [goid 33883] [evidence IEA]	MGC22679; MGC111048	MGC22679; MGC111048
Homo sapiens	RefSeq	NM_001008489.2	ILMN_24979	PHOSPHO2	NM_001008489.2	NM_001008489.2		493911	77404430	NM_001008489.2	PHOSPHO2	NP_001008489.1	ILMN_1728380	0005810086	S	588	GAGCAGTGACATCATTGCCTTTCACTCCAGGGATGGTGGAACTCTTCAAC	2	+	170265927-170265976	2q31.1a	Homo sapiens phosphatase, orphan 2 (PHOSPHO2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: pyridoxal 5'-phosphate + H2O = pyridoxal + phosphate [goid 33883] [evidence IEA]	MGC22679; MGC111048	MGC22679; MGC111048
Homo sapiens	RefSeq	NR_004395.1	ILMN_352770	SNORD1A	NR_004395.1	NR_004395.1		677848	161087015	NR_004395.1	SNORD1A		ILMN_3244281	0000650209	S	1	CACAAGCCTATGATGGTTAGTTATCCCTGTCTGAAAATCTGGACTGAGGG	17	+	74557715-74557764		Homo sapiens small nucleolar RNA, C/D box 1A (SNORD1A), small nucleolar RNA.				snR38A; R38A	snR38A; R38A
Homo sapiens	RefSeq	NM_207119.1	ILMN_28591	LRRC20	NM_207119.1	NM_207119.1		55222	46397368	NM_207119.1	LRRC20	NP_997002.1	ILMN_1734552	0000830600	I	14	GCTCCGGAGGCTCCGGTTGCCCATCCGAGCCCCTGCCAGGCTCTAACGTT	10	-	72141351-72141400	10q22.1a-q22.1b	Homo sapiens leucine rich repeat containing 20 (LRRC20), transcript variant 1, mRNA.				FLJ10751; FLJ10844	FLJ10751; FLJ10844
Homo sapiens	RefSeq	NM_001246.2	ILMN_11079	ENTPD2	NM_001246.2	NM_001246.2		954	45827719	NM_001246.2	ENTPD2	NP_001237.1	ILMN_1749553	0006420278	A	1784	TCAATCCAGCTCCTTGAACCCCTCCAGCCCGCTTCAGCCTGGGCATCACT	9	-	139942750-139942799	9q34.3e	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 2 (ENTPD2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	NTPDase-2; CD39L1	NTPDase-2; CD39L1
Homo sapiens	RefSeq	XM_001720624.1	ILMN_345556	LOC729371	XM_001720624.1	XM_001720624.1		729371	169172850	XM_001720624.1	LOC729371	XP_001720676.1	ILMN_3244137	0003180669	S	2089	GCTCACAAAAACCTGTGTTGTATAAAATCGAGGTTTAGGGGATCTAGGGC	8	-	7607186-7607235	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC729371 (LOC729371), mRNA.					
Homo sapiens	RefSeq	NM_024411.2	ILMN_10826	PDYN	NM_024411.2	NM_024411.2		5173	32483402	NM_024411.2	PDYN	NP_077722.1	ILMN_1747019	0003060050	S	2295	GTGGGTCCAGGAGATGAGGCTGGATAGGAGAGGAAAAGGCTTGAGTCTGG	20	-	1959614-1959663	20p13d	Homo sapiens prodynorphin (PDYN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9047294] [evidence IDA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]	Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect [goid 1515] [evidence IEA]	MGC26418; PENKB	MGC26418; PENKB
Homo sapiens	RefSeq	XM_926932.1	ILMN_31682	LOC643630	XM_926932.1	XM_926932.1		643630	89029381	XM_926932.1	LOC643630	XP_932025.1	ILMN_1803909	0006660482	S	3	GCATGGTGGTCAAGAAACTGACAGATCTTATTATTCTGTTCTCCAGCTAC	9	+	46416040-46416063:46417584-46417609	9p11.2a	PREDICTED: Homo sapiens hypothetical protein LOC643630 (LOC643630), mRNA.					
Homo sapiens	RefSeq	XM_942830.1	ILMN_37304	LOC653905	XM_942830.1	XM_942830.1		653905	89057128	XM_942830.1	LOC653905	XP_947923.1	ILMN_1802249	0004670767	S	870	CCCGGAAGGAGTGGAGCCTGTCATATTGGATTCAGTGACTTTTGATGATC					PREDICTED: Homo sapiens similar to zinc finger protein 266 (LOC653905), mRNA.					
Homo sapiens	RefSeq	NM_198426.1	ILMN_3340	CHMP2A	NM_198426.1	NM_198426.1		27243	38372932	NM_198426.1	CHMP2A	NP_940818.1	ILMN_1762932	0003130022	I	74	CCGGGTGTCCGGTGCCTCGCTTCTCCCTGGGACCCTGTCGTCAACATCGA	19	-	63758044-63758093	19q13.43c	Homo sapiens chromatin modifying protein 2A (CHMP2A), transcript variant 2, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a specific domain of a protein [goid 19904] [pmid 17928862] [evidence IPI]	VPS2; VPS2A; CHMP2; BC-2; BC2	VPS2; VPS2A; CHMP2; BC-2; BC2
Homo sapiens	RefSeq	NM_173513.2	ILMN_170800	C2ORF52	NM_173513.2	NM_173513.2		151477	34222230	NM_173513.2	C2orf52	NP_775784.1	ILMN_2195099	0006760441	S	1090	TGATGAGTTCTGTCTTTATGCTTATGATCCACGCAGGTAGGTCGTCTCAG	2	-	232081523-232081572	2q37.1b	Homo sapiens chromosome 2 open reading frame 52 (C2orf52), mRNA.				MGC43122	MGC43122
Homo sapiens	RefSeq	XM_937329.1	ILMN_136978	LY6H	XM_937329.1	XM_937329.1		4062	89028951	XM_937329.1	LY6H	XP_942422.1	ILMN_1755694	0000060377	I	2	TCCGGACGCACCTGCAGCTCCCCGGGGAGAAGAGGACGCCCCCCATCCGC				8q24.3f	PREDICTED: Homo sapiens lymphocyte antigen 6 complex, locus H (LY6H), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9799603] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9799603] [evidence TAS]			
Homo sapiens	RefSeq	NM_203436.1	ILMN_6498	ASCL4	NM_203436.1	NM_203436.1		121549	44771205	NM_203436.1	ASCL4	NP_982260.1	ILMN_1813075	0000540437	S	1872	GGAAAGTAATTGTTGACCTCCTGCTTTGGGTGAAGGAGACTGTAAGCTGG	12	+	106694163-106694212	12q23.3d	Homo sapiens achaete-scute complex homolog 4 (Drosophila) (ASCL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	HASH4	HASH4
Homo sapiens	RefSeq	XM_926284.1	ILMN_32366	MGC42638	XM_926284.1	XM_926284.1		340561	89059899	XM_926284.1	MGC42638	XP_931377.1	ILMN_1683520	0000010424	A	267	ATGCTCCACTGGCAGGCCACCATAACGAGGCCCAACGACAGCTCCTACCT	X	+	84076289-84076338		PREDICTED: Homo sapiens hypothetical protein MGC42638 (MGC42638), mRNA.					
Homo sapiens	RefSeq	NM_001037582.1	ILMN_11190	SCD5	NM_001037582.1	NM_001037582.1		79966	83035032	NM_001037582.1	SCD5	NP_001032671.1	ILMN_2303912	0002940674	A	623	GACCACCGAGCCCACCACAAGTACTCAGAGACGGATGCTGACCCCCACAA	4	-	83821015-83821064	4q21.22a	Homo sapiens stearoyl-CoA desaturase 5 (SCD5), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	HSCD5; SCD4; FLJ21032; SCD2; ACOD4; FADS4	HSCD5; SCD4; FLJ21032; SCD2; ACOD4; FADS4
Homo sapiens	RefSeq	NM_001037582.1	ILMN_11190	SCD5	NM_001037582.1	NM_001037582.1		79966	83035032	NM_001037582.1	SCD5	NP_001032671.1	ILMN_2237428	0003610671	I	2309	GTTTCAAGAGAGATTTGTTCACTGCCCAGCTCGTTTTGTGTCCTGAGCCC	4	-	83770373-83770422	4q21.22a	Homo sapiens stearoyl-CoA desaturase 5 (SCD5), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: stearoyl-CoA + 2 ferrocytochrome b5 + O2 + 2 H+ = oleoyl-CoA + 2 ferricytochrome b5 + H2O [goid 4768] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	HSCD5; SCD4; FLJ21032; SCD2; ACOD4; FADS4	HSCD5; SCD4; FLJ21032; SCD2; ACOD4; FADS4
Homo sapiens	RefSeq	XR_037022.1	ILMN_352641	LOC730275	XR_037022.1	XR_037022.1		730275	169170028	XR_037022.1	LOC730275		ILMN_3229954	0001190170	A	224	CCTCCAACCAGAGCAAACAACCTGCCAAGTTGGCAGCTGTTGCTCATGAG	7	+	56840694-56840743	7p11.2a	PREDICTED: Homo sapiens misc_RNA (LOC730275), miscRNA.					
Homo sapiens	RefSeq	XM_941026.1	ILMN_40979	ING5	XM_941026.2	XM_941026.2		84289	113414347	XM_941026.2	ING5	XP_946119.1	ILMN_1660701	0002140376	I	47	CCAGTGGTGAAGTGGGAAGAGGAGTGACATGGGTACTGGAGGAGCTGGCG				2q37.3g	PREDICTED: Homo sapiens inhibitor of growth family, member 5 (ING5), mRNA.		The addition of an acetyl group to a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6473] [pmid 12750254] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 12750254] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism [goid 45926] [pmid 12750254] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12750254] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_000055.1	ILMN_26619	BCHE	NM_000055.1	NM_000055.1		590	4557350	NM_000055.1	BCHE	NP_000046.1	ILMN_2176592	0002030414	S	2261	CCCCCCAAAATTATCAGTGCTCTGCTTTTAGTCACGTGTATTTTCATTAC	3	-	166973519-166973568	3q26.1e	Homo sapiens butyrylcholinesterase (BCHE), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide [goid 5641] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving cocaine, an alkaloid obtained from the dried leaves of the shrub Erythroxylon coca. It is a cerebral stimulant and narcotic [goid 50783] [pmid 8622553] [evidence TAS]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 11569538] [evidence NAS]; Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion [goid 4104] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 11569538] [evidence NAS]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]	CHE1; E1	CHE1; E1
Homo sapiens	RefSeq	XM_927480.1	ILMN_31967	LOC644310	XM_938150.2	XM_938150.2		644310	113430429	XM_938150.2	LOC644310	XP_943243.2	ILMN_1652215	0003850452	S	7	ATGCCGACGTTGACTGCGAAACTGTACTCCCTGCTGTTCCGCAGGACTTC				Xp11.22b	PREDICTED: Homo sapiens similar to ubiquinol-cytochrome c reductase complex (LOC644310), mRNA.					
Homo sapiens	RefSeq	NM_014069.1	ILMN_11396	PSORS1C2	NM_014069.1	NM_014069.1		170680	7662664	NM_014069.1	PSORS1C2	NP_054788.1	ILMN_1653447	0004640133	S	927	CGCCCGTTTTTTCCTCTGACAGCCTAAGCCTACTCTCCTACCTCGCCTCC	6	-	31213456-31213505	6p21.33a	Homo sapiens psoriasis susceptibility 1 candidate 2 (PSORS1C2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	C6orf17; SPR1	C6orf17; SPR1
Homo sapiens	RefSeq	NM_007028.3	ILMN_22919	TRIM31	NM_007028.3	NM_007028.3		11074	62865603	NM_007028.3	TRIM31	NP_008959.3	ILMN_1748685	0001850674	A	1942	TTAGCAGACTGGAACCACCACGCAAGCCTCTGTAGGGGGTGGATGGAGAC	6	-	30178688-30178737	6p21.33b	Homo sapiens tripartite motif-containing 31 (TRIM31), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HCG1; HCGI; RNF; C6orf13	HCG1; HCGI; RNF; C6orf13
Homo sapiens	RefSeq	NM_014182.3	ILMN_7331	ORMDL2	NM_014182.4	NM_014182.4		29095	119943094	NM_014182.4	ORMDL2	NP_054901.1	ILMN_1774708	0003830020	S	933	CAGGATGGGTAGAGAGCTGTCCTCATAAGGCTGGGGGTGGGAAGATGGAA	12	+	54500825-54500874	12q13.2b-q13.2c	Homo sapiens ORM1-like 2 (S. cerevisiae) (ORMDL2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MSTP095; MST095; HSPC160; adoplin-2	MSTP095; MST095; HSPC160; adoplin-2
Homo sapiens	RefSeq	NM_016558.2	ILMN_23327	SCAND1	NM_016558.2	NM_016558.2		51282	15967154	NM_016558.2	SCAND1	NP_057642.1	ILMN_1795317	0004560170	I	102	TCAAGGGTGACGCGAGCTCTGCCCTTTAACCGGAAACGTCTCCCTGCTCA	20	-	34542277-34542326	20q11.23a	Homo sapiens SCAN domain containing 1 (SCAND1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	RAZ1; SDP1	RAZ1; SDP1
Homo sapiens	RefSeq	NM_033630.1	ILMN_23327	SCAND1	NM_016558.2	NM_016558.2		51282	15967154	NM_016558.2	SCAND1	NP_057642.1	ILMN_1794230	0005050437	A	527	TCGGTCCCGAGACGTTCCGCCAGCGTTTCCGGCAGTTCCGCTACCAGGAT	20	-	34541852-34541901	20q11.23a	Homo sapiens SCAN domain containing 1 (SCAND1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence ISS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	RAZ1; SDP1	RAZ1; SDP1
Homo sapiens	RefSeq	XM_933330.1	ILMN_178074	LOC728832	XR_015411.1	XR_015411.1		728832	113420723	XR_015411.1	LOC728832		ILMN_1683764	0006270386	A	1218	AGAAACAGGAAGTGAGAAAATGGGCAACTGACACAAATCAATAATTAACT	9	+	44184616-44184665	9p11.2c	PREDICTED: Homo sapiens hypothetical protein LOC728832 (LOC728832), mRNA.					
Homo sapiens	RefSeq	XM_929075.1	ILMN_178074	LOC728832	XR_015411.1	XR_015411.1		728832	113420723	XR_015411.1	LOC728832		ILMN_1671682	0007000128	I	1855	GGAGAGGTCGGTGATGCTGTCTCGGGGTCAGAGACCTGAGCTATATGGGG	9	+	44185253-44185302	9p11.2c	PREDICTED: Homo sapiens hypothetical protein LOC728832 (LOC728832), mRNA.					
Homo sapiens	RefSeq	NM_152367.1	ILMN_3223	C1ORF161	NM_152367.1	NM_152367.1		126868	22748790	NM_152367.1	C1orf161	NP_689580.1	ILMN_1772790	0002470424	S	2676	GTAACTGCATGAAGAAGGTCTGGGGACTCACACAGGAGCTGGGCACTGAG	1	+	116478831-116478880	1p13.1c	Homo sapiens chromosome 1 open reading frame 161 (C1orf161), mRNA.				FLJ38716; RP5-1185H19.1	FLJ38716; RP5-1185H19.1
Homo sapiens	RefSeq	NM_012373.1	ILMN_16480	OR3A3	NM_012373.1	NM_012373.1		8392	13562103	NM_012373.1	OR3A3	NP_036505.1	ILMN_1801987	0000870239	S	897	CAGCCTCAGAAATACTGATGTTCAGGGCGCTCTGTGTCAGCTACTTGTGG	17	+	3271508-3271557	17p13.3a	Homo sapiens olfactory receptor, family 3, subfamily A, member 3 (OR3A3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8004088] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR17-201; OR3A8P; OR3A7; OR17-137; OR17-16; OR3A6	OR17-201; OR17-137; OR3A6; OR3A8P; OR3A7; OR17-16
Homo sapiens	RefSeq	NM_017747.1	ILMN_16675	ANKHD1	NM_017747.1	NM_017747.1		54882	46519146	NM_017747.1	ANKHD1	NP_060217.1	ILMN_1765091	0000610546	I	7685	GCCCAGCAGATTTGGCCTGGCACGTGGGCACCTCATATTGGAAACATGCA	5	+	139883950-139883999	5q31.3a-q31.3b	Homo sapiens ankyrin repeat and KH domain containing 1 (ANKHD1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	VBARP; MASK	VBARP; MASK
Homo sapiens	RefSeq	NM_134470.2	ILMN_8626	IL1RAP	NM_134470.2	NM_134470.2		3556	24430221	NM_134470.2	IL1RAP	NP_608273.1	ILMN_2357062	0000940615	A	901	AGGTAGTAGGCTCTCCAAAAAATGCAGTGCCCCCTGTGATCCATTCACCT	3	+	190338221-190338229:190341133-190341173	3q28c	Homo sapiens interleukin 1 receptor accessory protein (IL1RAP), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7775431] [evidence TAS]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 7775431] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9065432] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12721283] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]	FLJ37788; C3orf13; IL1R3; IL-1RAcP	FLJ37788; C3orf13; IL1R3; IL-1RAcP
Homo sapiens	RefSeq	NM_134470.2	ILMN_8626	IL1RAP	NM_134470.2	NM_134470.2		3556	24430221	NM_134470.2	IL1RAP	NP_608273.1	ILMN_1793870	0003800427	I	1310	GAATAAGGACAAAAGGAGAGATTGAGAACAAGAGAGCTCCAGCACCTAGC	3	+	190347340-190347389	3q28c	Homo sapiens interleukin 1 receptor accessory protein (IL1RAP), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7775431] [evidence TAS]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 7775431] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9065432] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; The chemical reactions and pathways resulting in the formation of interleukin-2 [goid 42094] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12721283] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]	FLJ37788; C3orf13; IL1R3; IL-1RAcP	FLJ37788; C3orf13; IL1R3; IL-1RAcP
Homo sapiens	RefSeq	XM_940500.1	ILMN_138164	ADAM32	XM_940500.1	XM_940500.1		203102	89028614	XM_940500.1	ADAM32	XP_945593.1	ILMN_1703383	0007550491	I	2561	CTCTTTCCTTTACCCCCGGGGACTACAGTTTTGCAGGTGCAGGGCCCTTA				8p11.23b-p11.23a	PREDICTED: Homo sapiens ADAM metallopeptidase domain 32 (ADAM32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_000031.4	ILMN_23545	ALAD	NM_000031.4	NM_000031.4		210	51558761	NM_000031.4	ALAD	NP_000022.2	ILMN_2404657	0002070397	A	2464	GGAGCGGGGACAGTGGGGATGGAGAAAGGGGAATGGATTGTGGATGTGTT	9	-	115189034-115189083	9q32c	Homo sapiens aminolevulinate, delta-, dehydratase (ALAD), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11032836] [evidence EXP]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [pmid 3758678] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: 2 5-aminolevulinate = porphobilinogen + 2 H2O [goid 4655] [pmid 3463993] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ALADH; PBGS; MGC5057	PBGS; MGC5057; ALADH
Homo sapiens	RefSeq	NM_015236.3	ILMN_18053	LPHN3	NM_015236.3	NM_015236.3		23284	59814434	NM_015236.3	LPHN3	NP_056051.1	ILMN_1711807	0006620369	S	5702	GCACGTCTGTTGTAATGCAAAGCATATTTGGCAAGCAGTTCATCACCAGG	4	+	62620288-62620337	4q13.1c	Homo sapiens latrophilin 3 (LPHN3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10994649] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 10994649] [evidence NAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	LEC3; CIRL3	LEC3; CIRL3
Homo sapiens	RefSeq	XM_937110.1	ILMN_18053	LPHN3	NM_015236.3	NM_015236.3		23284	59814434	NM_015236.3	LPHN3	NP_056051.1	ILMN_1692623	0001170739	S	4175	GCCTGGAACTCATTCATGAGGAATCTGATGCTCCTTTGCTGCCCCCAAGA	4	+	62618761-62618810	4q13.1c	Homo sapiens latrophilin 3 (LPHN3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10994649] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 10994649] [evidence NAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	LEC3; CIRL3	
Homo sapiens	RefSeq	XR_038093.1	ILMN_342784	LOC100133802	XR_038093.1	XR_038093.1		100133802	169217942	XR_038093.1	LOC100133802		ILMN_3241882	0004880156	S	577	GCACTTCCACTGGGCACCGTCCCTCAAAGCTTGTCTCCACATGAGGATTT					PREDICTED: Homo sapiens misc_RNA (LOC100133802), miscRNA.					
Homo sapiens	RefSeq	NM_001901.2	ILMN_3374	CTGF	NM_001901.2	NM_001901.2		1490	98986335	NM_001901.2	CTGF	NP_001892.1	ILMN_2115125	0002640292	S	2089	TTGCAAAGGGGAGGCATCAGTGTCCTTGGCAGGCTGATTTCTAGGTAGGA	6	-	132311214-132311263	6q23.2b	Homo sapiens connective tissue growth factor (CTGF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10809757] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10809757] [evidence TAS]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 10809757] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 10809757] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [pmid 9371786] [evidence TAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	CCN2; MGC102839; IGFBP8; NOV2; HCS24	CCN2; MGC102839; IGFBP8; NOV2
Homo sapiens	RefSeq	NM_002507.1	ILMN_28399	NGFR	NM_002507.1	NM_002507.1		4804	4505392	NM_002507.1	NGFR	NP_002498.1	ILMN_1752658	0006980021	S	3093	CCTGGGCACCTGGGGAGTGGGACAGAGTCTGGGTGTATTTATTTTCCTCC	17	+	44947066-44947115	17q21.33a	Homo sapiens nerve growth factor receptor (TNFR superfamily, member 16) (NGFR), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3022937] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3022937] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; The series of events in which a temperature stimulus (hot or cold) is received and converted into a molecular signal [goid 16048] [evidence IEA]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates [goid 42488] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA];  [goid 5035] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with nerve growth factor [goid 48406] [evidence IEA]	p75(NTR); TNFRSF16; CD271	p75(NTR); TNFRSF16; CD271
Homo sapiens	RefSeq	NM_007183.2	ILMN_27019	PKP3	NM_007183.2	NM_007183.2		11187	53729347	NM_007183.2	PKP3	NP_009114.1	ILMN_1753457	0002750017	I	1847	GAGGTGTCCAAGGACCCCAAGGGCCTCGAGTGGCTGTGGAGCCCCCAGAT	11	+	393111-393160	11p15.5d	Homo sapiens plakophilin 3 (PKP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_939454.1	ILMN_44993	LOC645852	XM_928835.1	XM_928835.1		645852	88965665	XM_928835.1	LOC645852	XP_933928.1	ILMN_1704976	0003130564	S	121	AGGGAGATCAACAAGGTGGAAGGCACATTCTGGACACACTGGAACCAGGA	3	-	127874305-127874354	3q21.3a	PREDICTED: Homo sapiens similar to splicing factor 3a, subunit 2, 66kDa (LOC645852), mRNA.					
Homo sapiens	Unigene	Hs.552160	ILMN_110862	HS.552160	Hs.552160		Hs.552160		6086793	AW118209			ILMN_1828225	0004150706	S	259	GAACACCAGCAAACATTGTGGCAGGGGCTGGAGCTCACTGGGAGAAGGGT	9	-	32752389-32752438		xd91c02.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2604962 3, mRNA sequence					
Homo sapiens	RefSeq	XM_927467.1	ILMN_41650	LOC644294	XM_927467.1	XM_927467.1		644294	89034029	XM_927467.1	LOC644294	XP_932560.1	ILMN_1712435	0004070639	S	61	GCCGGCGCGAGGCCCAAGGCTGCGGTGCTGCGGCTACTGGCGGCGACGAG	11	+	62070738-62070787		PREDICTED: Homo sapiens hypothetical protein LOC644294 (LOC644294), mRNA.					
Homo sapiens	RefSeq	NM_003034.2	ILMN_181880	ST8SIA1	NM_003034.2	NM_003034.2		6489	28373095	NM_003034.2	ST8SIA1	NP_003025.1	ILMN_2048011	0003370630	S	1833	AGATGCAGTTCAAAAACAAGACAGACTCGAGTTGTTAGGGCTGAGGAACC	12	-	22245423-22245472	12p12.1d	Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 (ST8SIA1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8195250] [evidence TAS]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 8195250] [evidence TAS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 8195250] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]	Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	ST8Sia I; SIAT8A; ST8SiaI; GD3S; SIAT8	ST8Sia I; SIAT8A; ST8SiaI; GD3S; SIAT8
Homo sapiens	RefSeq	NM_003034.2	ILMN_181880	ST8SIA1	NM_003034.2	NM_003034.2		6489	28373095	NM_003034.2	ST8SIA1	NP_003025.1	ILMN_1664859	0005360025	S	1607	GTGACTCCAAGAGGGAATGGTCAAGTTGTTTCATGAGTTTGCATGGGCCC	12	-	22245649-22245698	12p12.1d	Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 (ST8SIA1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8195250] [evidence TAS]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 8195250] [evidence TAS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 8195250] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]	Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	ST8Sia I; SIAT8A; ST8SiaI; GD3S; SIAT8	ST8Sia I; SIAT8A; ST8SiaI; GD3S; SIAT8
Homo sapiens	RefSeq	NM_031848.1	ILMN_1565	PCDHA6	NM_031848.1	NM_031848.1		56142	14165389	NM_031848.1	PCDHA6	NP_114036.1	ILMN_1799335	0002650537	A	484	CCACTGGAGGGCGCGTCCGATGCAGATGTTGGCTCAAATTCCATCTTAAC	5	+	140188317-140188366	5q31.3b	Homo sapiens protocadherin alpha 6 (PCDHA6), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CNR2; CNRN2; CRNR2; PCDH-ALPHA6; CNRS2	CNR2; CNRN2; CRNR2; PCDH-ALPHA6; CNRS2
Homo sapiens	RefSeq	XR_015365.2	ILMN_166232	LOC728257	XR_015365.2	XR_015365.2		728257	169208560	XR_015365.2	LOC728257		ILMN_3295922	0004490092	M	1761	GTAGCCACTATGGGAACTTCGCTCCAATGTAGTGTCTCCCACGACAAACA				15q14c	PREDICTED: Homo sapiens misc_RNA (LOC728257), miscRNA.					
Homo sapiens	RefSeq	NM_020932.1	ILMN_12120	MAGEE1	NM_020932.1	NM_020932.1		57692	20143481	NM_020932.1	MAGEE1	NP_065983.1	ILMN_2205032	0002760689	S	3498	GGCACTCTAAATTGTGGCTGGCTTCCCTTTCTGTCTGCTATTGTATGAAG	X	+	75568018-75568067	Xq13.3c	Homo sapiens melanoma antigen family E, 1 (MAGEE1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14623885] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14623885] [evidence ISS]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 14623885] [evidence ISS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 14623885] [evidence ISS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [pmid 14623885] [evidence ISS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 14623885] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14623885] [evidence ISS]	KIAA1587; HCA1; DAMAGE	KIAA1587; HCA1; DAMAGE
Homo sapiens	RefSeq	NM_020932.1	ILMN_12120	MAGEE1	NM_020932.1	NM_020932.1		57692	20143481	NM_020932.1	MAGEE1	NP_065983.1	ILMN_1722022	0004760653	S	3062	TTGTTCACAACTTCAGGTAGAGGAATGCATGGCAGTCAGAGGGGCCTTGC	X	+	75567582-75567601:75567602-75567631	Xq13.3c	Homo sapiens melanoma antigen family E, 1 (MAGEE1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14623885] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14623885] [evidence ISS]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 14623885] [evidence ISS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 14623885] [evidence ISS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [pmid 14623885] [evidence ISS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 14623885] [evidence ISS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14623885] [evidence ISS]	KIAA1587; HCA1; DAMAGE	KIAA1587; HCA1; DAMAGE
Homo sapiens	RefSeq	NM_006368.4	ILMN_181274	CREB3	NM_006368.4	NM_006368.4		10488	38327637	NM_006368.4	CREB3	NP_006359.3	ILMN_1703072	0007100520	S	1559	ACTCAGGCTAGATATGAGGATATGTGGGGGGTCTCAGCAGGAGCCTGGGG	9	+	35726713-35726723:35726724-35726762	9p13.3a	Homo sapiens cAMP responsive element binding protein 3 (CREB3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10675342] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10623756] [evidence IMP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10675342] [evidence IMP]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10623756] [evidence IMP]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10623756] [evidence IMP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15001559] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10623756] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 9271389] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The reactivation of a virus from a latent to a lytic state [goid 19046] [pmid 10623756] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 15001559] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 10675342] [evidence IMP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 10623756] [evidence NAS]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [pmid 15001559] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51928] [pmid 15001559] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10675342] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA];  [goid 8140] [pmid 9271389] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9271389] [evidence IDA]; Interacting selectively with a CCR1 chemokine receptor [goid 31726] [pmid 15001559] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10675342] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	LZIP; LUMAN; MGC15333; MGC19782	LZIP; LUMAN; MGC15333; MGC19782
Homo sapiens	RefSeq	NM_022117.1	ILMN_26999	TSPYL2	NM_022117.1	NM_022117.1		64061	11545834	NM_022117.1	TSPYL2	NP_071400.1	ILMN_1775336	0002690376	I	592	GCGCCCCAGAGGTTAGTTGACCCGAAGAGCAAGGAAGAGGCGATCATCAT	X	+	53128881-53128930	Xp11.22a	Homo sapiens TSPY-like 2 (TSPYL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence ISS]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 11395479] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 11395479] [evidence NAS]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [pmid 11395479] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence ISS]	Interacting selectively with DNA sequences encoding ribosomal RNA [goid 182] [pmid 11395479] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11395479] [evidence NAS]	CDA1; CINAP; CTCL; SE20-4; HRIHFB2216; DENTT	CDA1; CTCL; HRIHFB2216; CINAP; SE20-4; DENTT
Homo sapiens	RefSeq	NM_022117.1	ILMN_26999	TSPYL2	NM_022117.1	NM_022117.1		64061	11545834	NM_022117.1	TSPYL2	NP_071400.1	ILMN_2260813	0004540373	I	70	GACGCGGCTAAAAGCGAAGGGGCGAGTGCGAGTCCCCTGAGCTGTACGAA	X	+	53128359-53128405:53128406-53128408	Xp11.22a	Homo sapiens TSPY-like 2 (TSPYL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence ISS]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 11395479] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 11395479] [evidence NAS]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [pmid 11395479] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence ISS]	Interacting selectively with DNA sequences encoding ribosomal RNA [goid 182] [pmid 11395479] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11395479] [evidence NAS]	CDA1; CINAP; CTCL; SE20-4; HRIHFB2216; DENTT	CDA1; CTCL; HRIHFB2216; CINAP; SE20-4; DENTT
Homo sapiens	RefSeq	NM_022117.1	ILMN_26999	TSPYL2	NM_022117.1	NM_022117.1		64061	11545834	NM_022117.1	TSPYL2	NP_071400.1	ILMN_2347298	0004260477	A	2129	ATTCGGACGACTCTGACCTAGAGGATGTGCTTCAGGTCCCAAACGGTTGG	X	+	53133777-53133826	Xp11.22a	Homo sapiens TSPY-like 2 (TSPYL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence ISS]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 11395479] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 11395479] [evidence NAS]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [pmid 11395479] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence ISS]	Interacting selectively with DNA sequences encoding ribosomal RNA [goid 182] [pmid 11395479] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11395479] [evidence NAS]	CDA1; CINAP; CTCL; SE20-4; HRIHFB2216; DENTT	CDA1; CTCL; HRIHFB2216; CINAP; SE20-4; DENTT
Homo sapiens	RefSeq	XM_944226.1	ILMN_26999	TSPYL2	NM_022117.1	NM_022117.1		64061	11545834	NM_022117.1	TSPYL2	NP_071400.1	ILMN_1693635	0007380730	A	2716	TTGCGGTATTCTTTGCGGTATTCTTGTCCCCGTCCCCCAGAAGGCTCGCC	X	+	53134364-53134413	Xp11.22a	Homo sapiens TSPY-like 2 (TSPYL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence ISS]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 11395479] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 11395479] [evidence NAS]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [pmid 11395479] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence ISS]	Interacting selectively with DNA sequences encoding ribosomal RNA [goid 182] [pmid 11395479] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11395479] [evidence NAS]	CDA1; CINAP; CTCL; SE20-4; HRIHFB2216; DENTT	
Homo sapiens	RefSeq	NM_022117.1	ILMN_26999	TSPYL2	NM_022117.1	NM_022117.1		64061	11545834	NM_022117.1	TSPYL2	NP_071400.1	ILMN_1657554	0006650743	A	2419	GCCCTCCGCCCCCGCAGGCTTCTGTGTGCTGCTAACTGTATTTATTGTGA	X	+	53134067-53134116	Xp11.22a	Homo sapiens TSPY-like 2 (TSPYL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11395479] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence ISS]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [pmid 11395479] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11395479] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 11395479] [evidence NAS]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [pmid 11395479] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence ISS]	Interacting selectively with DNA sequences encoding ribosomal RNA [goid 182] [pmid 11395479] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11395479] [evidence NAS]	CDA1; CINAP; CTCL; SE20-4; HRIHFB2216; DENTT	CDA1; CTCL; HRIHFB2216; CINAP; SE20-4; DENTT
Homo sapiens	RefSeq	NM_021128.3	ILMN_13427	POLR2L	NM_021128.3	NM_021128.3		5441	45359860	NM_021128.3	POLR2L	NP_066951.1	ILMN_1670037	0006200017	S	575	TCCCTCCTTCTGGGTGTTCTTCAGGCTGAGCAGAGAGGCTCCTGTACCCT	11	-	829972-830021	11p15.5c	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa (POLR2L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9409616] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 8786124] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [pmid 8786124] [evidence TAS]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [pmid 8786124] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 8524256] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hsRPB10b; RPABC5; RBP10; RPB10beta; RPB7.6; RPB10; hRPB7.6	RPABC5; RBP10; RPB10beta; RPB7.6; RPB10; hsRPB10b; hRPB7.6
Homo sapiens	RefSeq	NM_002563.2	ILMN_165109	P2RY1	NM_002563.2	NM_002563.2		5028	28872741	NM_002563.2	P2RY1	NP_002554.1	ILMN_1772667	0004880148	S	2759	GCCCCACTGCTGTGCAATGCCTTAGGACTTTGTTTGTGTTCCAGGACAAG	3	+	152555494-152555543	3q25.2a	Homo sapiens purinergic receptor P2Y, G-protein coupled, 1 (P2RY1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8630005] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 8630005] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 8630005] [evidence TAS]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y1	P2Y1
Homo sapiens	RefSeq	NM_033197.2	ILMN_23377	C20ORF114	NM_033197.2	NM_033197.2		92747	40807481	NM_033197.2	C20orf114	NP_149974.2	ILMN_1733904	0001990142	S	1370	CTCTGATCGGATCCAGCTGATGAACTCTGGGATTGGCTGGTTCCAACCTG	20	+	31356313-31356358:31357469-31357472	20q11.21c	Homo sapiens chromosome 20 open reading frame 114 (C20orf114), mRNA.			Interacting selectively with a lipid [goid 8289] [evidence IEA]	LPLUNC1; MGC14597	LPLUNC1; MGC14597
Homo sapiens	RefSeq	NM_000135.2	ILMN_7097	FANCA	NM_000135.2	NM_000135.2		2175	66880552	NM_000135.2	FANCA	NP_000126.2	ILMN_1799224	0000770398	I	5013	ACTGGAACCCACAGACCTCACACCTGGGGGACAGAGGCAGATAAGAAGGT	16	-	89804356-89804405	16q24.3b	Homo sapiens Fanconi anemia, complementation group A (FANCA), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9398857] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9398857] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8896564] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9398857] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IEA]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IEA]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12571280] [evidence IPI]	FAA; FA; FA1; MGC75158; FACA; FAH; FA-H; FANCH	FAA; FA; FA1; MGC75158; FACA; FAH; FA-H; FANCH
Homo sapiens	RefSeq	NM_173455.1	ILMN_27671	PDE8A	NM_173454.1	NM_173454.1		5151	47132536	NM_173454.1	PDE8A	NP_775656.1	ILMN_1699767	0002070450	A	3286	GGCTAACTGGAAAAAGCTGGGGTCGTATTCTAAGTGCTAAAGAAGGCTGC	15	+	83482883-83482932	15q25.3a	Homo sapiens phosphodiesterase 8A (PDE8A), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6198] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9187] [pmid 9618252] [evidence NAS]	Alters the level of transcription of target genes, usually by binding to a transcription factor, when phosphorylated by a sensor that detects the presence of a particular signal substance outside the cell [goid 156] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	HsT19550; FLJ16150	HsT19550
Homo sapiens	RefSeq	NM_001001659.1	ILMN_22138	OR2A14	NM_001001659.1	NM_001001659.1		135941	48717235	NM_001001659.1	OR2A14	NP_001001659.1	ILMN_1714891	0004050338	S	440	CCTGGGTGTTCAGCTTCCTCCTGGCTCTGGTCCCTTTAGTTCTCATCCTG	7	+	143457578-143457627	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 14 (OR2A14), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OST182; OR2A6; OR2A14P	OST182; OR2A6; OR2A14P
Homo sapiens	RefSeq	NM_001025068.1	ILMN_13086	ARPP-21	NM_001025068.1	NM_001025068.1		10777	68161519	NM_001025068.1	ARPP-21	NP_001020239.1	ILMN_2374728	0007160437	A	380	TCTGGATGAAGAGGAGAAACTGGAACTGCAGAGGCGGCTGGAGGCTCAGA	3	+	35698346-35698376:35699344-35699362	3p22.3a	Homo sapiens cyclic AMP-regulated phosphoprotein, 21 kD (ARPP-21), transcript variant 3, mRNA.				FLJ32997	FLJ32997
Homo sapiens	RefSeq	XM_931763.1	ILMN_35043	LOC643718	XM_931763.1	XM_931763.1		643718	89034308	XM_931763.1	LOC643718	XP_936856.1	ILMN_1722974	0007150398	S	121	CCTATGCCCATAGAGCTAAGTGAGGACAGACATTTCTGTTTTCGTACCCA	11	-	103993405-103993454	11q22.3a	PREDICTED: Homo sapiens hypothetical protein LOC643718 (LOC643718), mRNA.					
Homo sapiens	RefSeq	NM_020309.2	ILMN_6269	SLC17A7	NM_020309.2	NM_020309.2		57030	46255058	NM_020309.2	SLC17A7	NP_064705.1	ILMN_1770629	0003120286	S	2724	CAGGGGCTTAATGACTCAAAATCTGGGATCCTTCCCCTCTCAGACACCCC	19	-	54624645-54624694	19q13.33b	Homo sapiens solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 (SLC17A7), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10820226] [evidence IDA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of phosphate into, out of, within or between cells [goid 6817] [pmid 8632143] [evidence TAS]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The process of binding or confining a neurotransmitter such that it is separated from other components of a biological system [goid 42137] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + inorganic phosphate(out) = Na+(in) + inorganic phosphate(in) [goid 15319] [pmid 10820226] [evidence IDA];  [goid 15321] [pmid 8632143] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	VGLUT1; BNPI	VGLUT1; BNPI
Homo sapiens	RefSeq	NM_020807.1	ILMN_22764	ZNF319	NM_020807.1	NM_020807.1		57567	55741867	NM_020807.1	ZNF319	NP_065858.1	ILMN_1711361	0003180315	S	3934	GGTGCTGGCTCTCTGTCACAATGCCTCAAAAGACATGGAACCCAGGCCTA	16	-	58028809-58028858	16q13d	Homo sapiens zinc finger protein 319 (ZNF319), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126816; ZFP319	MGC126816; ZFP319
Homo sapiens	RefSeq	NR_021489.1	ILMN_357075	LOC338651	NR_021489.1	NR_021489.1		338651	178057319	NR_021489.1	LOC338651		ILMN_3248668	0000870142	S	1951	CTCAGGGAGTTTTCCTCACGGTGGAAGGCGAAGCAGGAACAGGCACACCA	11	+	1620100-1620149		Homo sapiens hypothetical protein LOC338651 (LOC338651), non-coding RNA.					
Homo sapiens	RefSeq	XM_001717755.1	ILMN_346909	LOC100131986	XM_001717755.1	XM_001717755.1		100131986	169217417	XM_001717755.1	LOC100131986	XP_001717807.1	ILMN_3245093	0005690136	S	1000	CTCCCGAGTAGCTGGGGTTACAGTCATGCGCCATCACGCCCGGCTAATTT	Y	-	57757155-57757204	Yq12w	PREDICTED: Homo sapiens similar to hCG1742852 (LOC100131986), mRNA.					
Homo sapiens	RefSeq	NM_181705.1	ILMN_11045	LOC90624	NM_181705.1	NM_181705.1		90624	32171235	NM_181705.1	LOC90624	NP_859056.1	ILMN_1709936	0005900133	S	1166	CTGTCCTTGACAAGATGGGCAGTATGACAAAAGGTCCTGGCATTCTACCA	5	+	130564007-130564056	5q31.1a	Homo sapiens hypothetical protein LOC90624 (LOC90624), mRNA.				MGC24679	MGC24679
Homo sapiens	RefSeq	NM_003822.3	ILMN_8599	NR5A2	NM_003822.3	NM_003822.3		2494	45505141	NM_003822.3	NR5A2	NP_003813.1	ILMN_2366654	0007330639	A	4709	TCACAGATCTGCAGCTGCCTTGGACTTGAATCCATGCAATGTTTAGAGTG	1	+	198412976-198413025	1q32.1a	Homo sapiens nuclear receptor subfamily 5, group A, member 2 (NR5A2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9786908] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9786908] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9786908] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 16289203] [evidence TAS]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 16289203] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 9786908] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12040021] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 16289203] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FTF; B1F2; FTZ-F1beta; hB1F; hB1F-2; LRH-1; B1F; FTZ-F1; CPF	FTF; B1F2; FTZ-F1beta; hB1F; hB1F-2; LRH-1; B1F; FTZ-F1; CPF
Homo sapiens	RefSeq	NM_205860.1	ILMN_8599	NR5A2	NM_003822.3	NM_003822.3		2494	45505141	NM_003822.3	NR5A2	NP_003813.1	ILMN_1811303	0004120408	A	4463	CGACAGGAGCTGATAAGCAAGAAAGCGTCACAGCCAGCGTCTGTTCACCC	1	+	198412730-198412779	1q32.1a	Homo sapiens nuclear receptor subfamily 5, group A, member 2 (NR5A2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9786908] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9786908] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9786908] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 16289203] [evidence TAS]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 16289203] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 9786908] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12040021] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 16289203] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FTF; B1F2; FTZ-F1beta; hB1F; hB1F-2; LRH-1; B1F; FTZ-F1; CPF	FTF; B1F2; FTZ-F1beta; hB1F; hB1F-2; LRH-1; B1F; FTZ-F1; CPF
Homo sapiens	RefSeq	NM_014969.3	ILMN_163009	WDR47	NM_014969.3	NM_014969.3		22911	34222316	NM_014969.3	WDR47	NP_055784.2	ILMN_2100085	0007320703	S	3784	GCAGCAGCAGTTATGTGACGCAACACTTGATGGTACAGTAAATTTACTGG	1	-	109314765-109314814	1p13.3b	Homo sapiens WD repeat domain 47 (WDR47), mRNA.				KIAA0893; FLJ90135	KIAA0893; FLJ90135
Homo sapiens	RefSeq	NR_002728.2	ILMN_5993	KCNQ1OT1	NR_002728.2	NR_002728.2		10984	166091427	NR_002728.2	KCNQ1OT1		ILMN_3248707	0007380392	S	59161	GGTATGTCTGGAGGGTGAAGAGAGGTTGGTTAGTGGGTAAAAATACACAG	11	-	2662018-2662067	11p15.5a	Homo sapiens KCNQ1 overlapping transcript 1 (non-protein coding) (KCNQ1OT1), non-coding RNA.				LIT1; KvDMR1; KCNQ10T1; FLJ41078; KvLQT1-AS	LIT1; KvDMR1; KCNQ10T1; FLJ41078; KvLQT1-AS
Homo sapiens	Unigene	Hs.577816	ILMN_129997	HS.577816	Hs.577816		Hs.577816		51667926	CR745891			ILMN_1825712	0002360017	S	180	ACACTGTGCTGGGGACTTTGAGCAATGCAGAGGAATGGAGAATGCCCCCC	12	+	125063938-125063987		CR745891 Soares_testis_NHT Homo sapiens cDNA clone IMAGp971N2059 ; IMAGE:1409837 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002146.3	ILMN_22452	HOXB3	NM_002146.4	NM_002146.4		3213	84570136	NM_002146.4	HOXB3	NP_002137.4	ILMN_1689874	0002350575	S	2328	GTCTTCCACCCCTTGTTCCATCTGCCTGCCAACCCATCGGAAAGGAATCC	17	-	46627472-46627521	17q21.32c	Homo sapiens homeobox B3 (HOXB3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX2; HOX2G; Hox-2.7	HOX2; HOX2G; Hox-2.7
Homo sapiens	RefSeq	NM_004261.3	ILMN_171084	SEP15	NM_004261.3	NM_004261.3		9403	42741647	NM_004261.3	SEP15	NP_004252.2	ILMN_2407082	0006100288	A	1166	GCCTCATGTGCTGTGTGCTCTTTGAAAGGAATGACAGCAGACTACAAAGC	1	-	87328752-87328801	1p22.3b	Homo sapiens 15 kDa selenoprotein (SEP15), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 11278576] [evidence IDA]	The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis [goid 51084] [pmid 11278576] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9535873] [evidence ISS]; Interacting selectively with selenium (Se) [goid 8430] [pmid 9535873] [evidence IDA]		
Homo sapiens	RefSeq	NM_024323.3	ILMN_21721	C19ORF57	NM_024323.3	NM_024323.3		79173	31543147	NM_024323.3	C19orf57	NP_077299.3	ILMN_1714419	0004880040	S	2079	TTGCCCGGAAGTTGGTCTTCCATGGACAACACAAAGGAGGCCGTGAGGTC	19	-	13993459-13993508	19p13.12c	Homo sapiens chromosome 19 open reading frame 57 (C19orf57), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8228263] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	MGC11271; MGC149720	MGC11271; MGC149720
Homo sapiens	RefSeq	NM_006355.2	ILMN_13190	TRIM38	NM_006355.2	NM_006355.2		10475	24497622	NM_006355.2	TRIM38	NP_006346.1	ILMN_1697971	0003930377	S	3062	GCAACAGTTGTGTCTAGATGTCAGAGGCATGGCTGGGCCTCCATCTCTGC	6	+	25985144-25985193	6p22.2a	Homo sapiens tripartite motif-containing 38 (TRIM38), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF15; RORET; MGC8946	RNF15; RORET; MGC8946
Homo sapiens	RefSeq	NM_178004.1	ILMN_7346	PRIMA1	NM_178004.1	NM_178004.1		145270	29788782	NM_178004.1	PRIMA1	NP_821071.1	ILMN_1757591	0004540348	I	511	AGCCAGGCTGGGTCCTAACAACTCTCTCTAGCATTTCCGGAGCCCCACGG	14	-	93261946-93261995	14q32.13a	Homo sapiens proline rich membrane anchor 1 (PRIMA1), transcript variant II, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]		PRIMA	PRIMA
Homo sapiens	RefSeq	NM_182496.1	ILMN_13870	CCDC38	NM_182496.1	NM_182496.1		120935	32698829	NM_182496.1	CCDC38	NP_872302.1	ILMN_1687813	0002760021	S	1563	CTGCATTGGAGATGCTGAGGATGACGGCCTCAACCCAATTCAAAAGCTGG	12	-	94790269-94790318	12q22d-q23.1a	Homo sapiens coiled-coil domain containing 38 (CCDC38), mRNA.				FLJ40089	FLJ40089
Homo sapiens	RefSeq	XM_927830.1	ILMN_38949	LOC644732	XM_927830.2	XM_927830.2		644732	113430243	XM_927830.2	LOC644732	XP_932923.2	ILMN_1738429	0001740544	S	2377	GCCCCTATATTAGATGAGCTGTGTGGCTTGATAGCCATTGCAGACACAGT	X	-	462411-462460		PREDICTED: Homo sapiens similar to ATPase, Cu++ transporting, alpha polypeptide (LOC644732), mRNA.					
Homo sapiens	Unigene	Hs.372983	ILMN_88313	HS.372983	Hs.372983		Hs.372983		45367292	CK905761			ILMN_1895378	0002140450	S	289	GGGGCTCAGCAACCCCAGGCCATCCCCACGGTCACTGCTAATTACGTTTT	1	+	5833688-5833737		ij80f01.x6 Human insulinoma Homo sapiens cDNA clone IMAGE:5777808 3, mRNA sequence					
Homo sapiens	RefSeq	NM_021708.1	ILMN_38361	LAIR1	NM_021706.2	NM_021706.2		3903	90669103	NM_021706.2	LAIR1	NP_068352.1	ILMN_1768598	0004150184	A	797	CTCCTGGTCCTCTTCTGCCTCCATCGCCAGAATCAGATAAAGCAGGGGCC	19	-	59559815-59559819:59559912-59559956	19q13.42a	Homo sapiens leukocyte-associated immunoglobulin-like receptor 1 (LAIR1), transcript variant b, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16754721] [evidence IPI]	CD305; LAIR-1	CD305; LAIR-1
Homo sapiens	RefSeq	NM_021706.2	ILMN_38361	LAIR1	NM_021706.2	NM_021706.2		3903	90669103	NM_021706.2	LAIR1	NP_068352.1	ILMN_2389211	0004280307	A	2593	GTGGTGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCAAAA	19	-	59557169-59557218	19q13.42a	Homo sapiens leukocyte-associated immunoglobulin-like receptor 1 (LAIR1), transcript variant b, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16754721] [evidence IPI]	CD305; LAIR-1	CD305; LAIR-1
Homo sapiens	RefSeq	NM_015352.1	ILMN_7876	POFUT1	NM_015352.1	NM_015352.1		23509	27436888	NM_015352.1	POFUT1	NP_056167.1	ILMN_1776076	0001400465	I	4373	CTAGACTAGGACTCCAGTGCCCTCCTCTCCCAAGAGACAAAGGCCATTGC	20	+	30289282-30289331	20q11.21b	Homo sapiens protein O-fucosyltransferase 1 (POFUT1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11524432] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9023546] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose [goid 6004] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 11698403] [evidence NAS]; The stepwise addition of sugar residues to the initially added O-linked sugar (usually GalNAc) to form a core O-glycan structure [goid 16266] [pmid 11698403] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11698403] [evidence NAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor [goid 46922] [pmid 11698403] [evidence TAS]	O-Fuc-T; O-FUT; FUT12; O-FucT-1; MGC2482; KIAA0180	O-Fuc-T; O-FUT; FUT12; O-FucT-1; MGC2482; KIAA0180
Homo sapiens	RefSeq	NM_015352.1	ILMN_7876	POFUT1	NM_015352.1	NM_015352.1		23509	27436888	NM_015352.1	POFUT1	NP_056167.1	ILMN_2276758	0000290348	I	4802	AATAATAGCCAGGCGTGGTGGCACATGCCTGTATTCCCAGCTGCTTGGGA	20	+	30289711-30289760	20q11.21b	Homo sapiens protein O-fucosyltransferase 1 (POFUT1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11524432] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9023546] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose [goid 6004] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 11698403] [evidence NAS]; The stepwise addition of sugar residues to the initially added O-linked sugar (usually GalNAc) to form a core O-glycan structure [goid 16266] [pmid 11698403] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11698403] [evidence NAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor [goid 46922] [pmid 11698403] [evidence TAS]	O-Fuc-T; O-FUT; FUT12; O-FucT-1; MGC2482; KIAA0180	O-Fuc-T; O-FUT; FUT12; O-FucT-1; MGC2482; KIAA0180
Homo sapiens	RefSeq	NM_015326.1	ILMN_7259	SRGAP2	NM_015326.1	NM_015326.1		23380	61888897	NM_015326.1	SRGAP2	NP_056141.1	ILMN_1797451	0001690152	I	471	GGACTCAGGAAGACTCTTTAAAAAGAGTAAAGAAGTCGGCCAGCAGCTCC	1	+	204633553-204633602	1q32.1h	Homo sapiens SLIT-ROBO Rho GTPase activating protein 2 (SRGAP2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0456; srGAP3; FNBP2	KIAA0456; srGAP3; FNBP2
Homo sapiens	RefSeq	XM_930197.1	ILMN_32462	LOC399937	XM_930197.2	XM_930197.2		399937	113422556	XM_930197.2	LOC399937	XP_935290.1	ILMN_1660099	0002360010	I	272	GCAGAGAAACCTCAAAACTGACATTTGTTTGAAGAACATGGCTTCCACTG	11	+	89227948-89227997	11q14.3b	PREDICTED: Homo sapiens similar to tripartite motif protein 39, transcript variant 2 (LOC399937), mRNA.					
Homo sapiens	RefSeq	XM_939231.1	ILMN_309384	LOC653147	NM_001093761.1	NM_001093761.1		653147	148226362	NM_001093761.1	LOC653147	NP_001087230.1	ILMN_1720438	0005080768	S	182	CGCAAGGACGACGAGGTCCAGGTAGTTCGAGGACACTACAAAGGTCAGCA	11	-	2313354-2313403	11p15.5a	Homo sapiens hCG1995786 (LOC653147), mRNA.					
Homo sapiens	RefSeq	NM_177405.1	ILMN_29872	CECR1	NM_177405.1	NM_177405.1		51816	29029551	NM_177405.1	CECR1	NP_803124.1	ILMN_1666174	0006770079	I	28	GGCGATCCCAGAGAGCATCTGGCTTCAATTTTCCTTTTTCCGGAGGGGAG	22	-	17680468-17680468:17680469-17680517	22q11.1d	Homo sapiens cat eye syndrome chromosome region, candidate 1 (CECR1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10756095] [evidence NAS]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 10756095] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]	ADGF; IDGFL	ADGF; IDGFL
Homo sapiens	RefSeq	NM_017424.2	ILMN_29872	CECR1	NM_177405.1	NM_177405.1		51816	29029551	NM_177405.1	CECR1	NP_803124.1	ILMN_1751851	0006200064	A	2825	CACTGTCTCAGAGAGGTTTTCCTGTGCTCGCCCTGTTTCTCTCAGGAAGC	22	-	17660388-17660437	22q11.1d	Homo sapiens cat eye syndrome chromosome region, candidate 1 (CECR1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10756095] [evidence NAS]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 10756095] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of an amino group from a substrate, producing ammonia (NH3) [goid 19239] [evidence IEA]	ADGF; IDGFL	ADGF; IDGFL
Homo sapiens	RefSeq	NM_138419.2	ILMN_307104	FAM54A	NM_001099286.1	NM_001099286.1		113115	149999349	NM_001099286.1	FAM54A	NP_001092756.1	ILMN_1697998	0004220544	S	1036	CCTCAGTTTTCATCTCTCCAGCCACCGTGTTTTCCTCCCGTACAACCAGG	6	-	136602470-136602519	6q23.3b	Homo sapiens family with sequence similarity 54, member A (FAM54A), transcript variant 1, mRNA.				DUFD1	DUFD1
Homo sapiens	RefSeq	NM_033313.1	ILMN_2953	CDC14A	NM_033312.2	NM_033312.2		8556	150417992	NM_033312.2	CDC14A	NP_201569.1	ILMN_1739164	0003360754	A	1065	GGACCACATCCTAAAAGCAAAATTGAGAATGGTTATCCTCTTCACGCCCC	1	+	100693606-100693636:100700795-100700813	1p21.2a	Homo sapiens CDC14 cell division cycle 14 homolog A (S. cerevisiae) (CDC14A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9367992] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9367992] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16221885] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	hCDC14; cdc14	Cdc14A1; Cdc14A2; hCDC14; cdc14
Homo sapiens	RefSeq	NM_033312.1	ILMN_2953	CDC14A	NM_033312.2	NM_033312.2		8556	150417992	NM_033312.2	CDC14A	NP_201569.1	ILMN_1774557	0004860390	I	2308	CCCAGCCGAGGCTGCCACCAAAGAAATTTAATAGTGCCAAGGAAGCCTTC	1	+	100737471-100737520	1p21.2a	Homo sapiens CDC14 cell division cycle 14 homolog A (S. cerevisiae) (CDC14A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9367992] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9367992] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16221885] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	hCDC14; cdc14	Cdc14A1; Cdc14A2; hCDC14; cdc14
Homo sapiens	RefSeq	NM_030779.2	ILMN_171630	KCNH6	NM_030779.2	NM_030779.2		81033	27886649	NM_030779.2	KCNH6	NP_110406.1	ILMN_2235785	0007000064	I	3170	TTTGGGAGGCCGAGGCGGGCGGATCAGACCATCCTGGCTAACACGGTGAA	17	+	58977100-58977149	17q23.3a	Homo sapiens potassium voltage-gated channel, subfamily H (eag-related), member 6 (KCNH6), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	HERG2; ERG2; Kv11.2	HERG2; ERG2; Kv11.2
Homo sapiens	RefSeq	NM_013417.1	ILMN_16832	IARS	NM_013417.1	NM_013417.1		3376	7770071	NM_013417.1	IARS	NP_038203.1	ILMN_1801639	0006420397	I	154	GCACAAGATTTAATTTTTAAAAGAGCGTGTTTCTTCGGGGCTTGCCGTTC	9	-	94095590-94095639	9q22.31a	Homo sapiens isoleucine-tRNA synthetase (IARS), transcript variant long, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7721108] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7721108] [evidence TAS]	The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]; The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]; The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]; The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]; The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]; The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ20736; ILRS; PRO0785	FLJ20736; ILRS; PRO0785
Homo sapiens	RefSeq	NM_001009570.1	ILMN_24972	CCT7	NM_001009570.1	NM_001009570.1		10574	58331184	NM_001009570.1	CCT7	NP_001009570.1	ILMN_2341793	0004290358	A	956	AAGCTTTCGTGTGGGAGCCAGCTATGGTGCGGATCAATGCGCTGACAGCA	2	+	73333331-73333380	2p13.2a	Homo sapiens chaperonin containing TCP1, subunit 7 (eta) (CCT7), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9819444] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9819444] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9819444] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	CCT-ETA; Nip7-1; TCP-1-eta; Ccth; MGC110985	Ccth; MGC110985; CCT-ETA; Nip7-1; TCP-1-eta
Homo sapiens	RefSeq	NM_177444.1	ILMN_172147	PPFIBP1	NM_003622.2	NM_003622.2		8496	29294626	NM_003622.2	PPFIBP1	NP_003613.2	ILMN_1806320	0002680131	A	743	GTTAACAGACCAGGTGGAGGCTCAGGGAGAGAAGATTCGAGATTTGGAGT	12	+	27679157-27679206	12p11.23a-p11.22b	Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1) (PPFIBP1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9624153] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9624153] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	hSgt2p; L2; hSGT2	hSgt2p; L2; hSGT2
Homo sapiens	RefSeq	NM_003622.2	ILMN_172147	PPFIBP1	NM_003622.2	NM_003622.2		8496	29294626	NM_003622.2	PPFIBP1	NP_003613.2	ILMN_2277252	0003390364	I	5908	CAGGCGTGAGCCACCATGCCCGGCCCAAATATTTTTTATTCAGGATGGTA	12	+	27739253-27739302	12p11.23a-p11.22b	Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1) (PPFIBP1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9624153] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9624153] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	hSgt2p; L2; hSGT2	hSgt2p; L2; hSGT2
Homo sapiens	RefSeq	NM_003622.2	ILMN_172147	PPFIBP1	NM_003622.2	NM_003622.2		8496	29294626	NM_003622.2	PPFIBP1	NP_003613.2	ILMN_1679460	0004010414	I	5297	GGTTTTCACAAATTGAGGTGGAGGTGGGCGGTTCAGTATCTGCCACTGGA	12	+	27738642-27738691	12p11.23a-p11.22b	Homo sapiens PTPRF interacting protein, binding protein 1 (liprin beta 1) (PPFIBP1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9624153] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9624153] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	hSgt2p; L2; hSGT2	hSgt2p; L2; hSGT2
Homo sapiens	RefSeq	NM_001329.1	ILMN_20261	CTBP2	NM_001329.2	NM_001329.2		1488	145580576	NM_001329.2	CTBP2	NP_001320.1	ILMN_1691294	0003290753	I	185	TTTCGCCGTGGACGCCGACCGTCCGGGACGAGGGTTTCATCACCTTAAAT	10	-	126839075-126839093:126848888-126848918	10q26.13e	Homo sapiens C-terminal binding protein 2 (CTBP2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9479502] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 9479502] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]		
Homo sapiens	RefSeq	NM_001329.2	ILMN_20261	CTBP2	NM_001329.2	NM_001329.2		1488	145580576	NM_001329.2	CTBP2	NP_001320.1	ILMN_3250209	0001010494	A	3244	CTACCCCAAAGCAAAATGACCTGGACCTGGTTCAAGGGAGGGAAGTGAAC	10	-	126677538-126677587	10q26.13e	Homo sapiens C-terminal binding protein 2 (CTBP2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9479502] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 9479502] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]		
Homo sapiens	RefSeq	NM_080686.1	ILMN_6888	BAT2	NM_080686.1	NM_080686.1		7916	18375625	NM_080686.1	BAT2	NP_542417.1	ILMN_2408179	0005080333	A	6043	CTACCCATGGTAGACTCACAGCTGCCTGTGGTGAACTTTGGCTCCCTGCC	6	+	31712495-31712544	6p21.33a	Homo sapiens HLA-B associated transcript 2 (BAT2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	G2; D6S51E; DKFZp686D09175; D6S51	G2; D6S51E; DKFZp686D09175; D6S51
Homo sapiens	RefSeq	NM_138812.1	ILMN_23963	DYDC1	NM_138812.1	NM_138812.1		143241	20270376	NM_138812.1	DYDC1	NP_620167.1	ILMN_2164173	0004010056	S	360	GCTCTGATGGAGCAGGAAATGATGGAGAGGCTCAAAGCAGAGGAGCTCTT	10	-	82101641-82101690	10q23.1a	Homo sapiens DPY30 domain containing 1 (DYDC1), mRNA.				bA36D19.5; DPY30D1; FLJ43920	bA36D19.5; DPY30D1; FLJ43920
Homo sapiens	RefSeq	NM_005515.2	ILMN_139103	HLXB9	NM_005515.2	NM_005515.2		3110	38348182	NM_005515.2	HLXB9	NP_005506.2	ILMN_1697812	0004780300	S	1611	AGAAACAGCGAGAGGGAGACCCAGGGGGCTGAAACTTGAACTCTGGTTCT	7	-	156490701-156490750	7q36.3c	Homo sapiens homeobox HB9 (HLXB9), mRNA.				HB9; SCRA1; HOXHB9	HB9; SCRA1; HOXHB9
Homo sapiens	Unigene	Hs.26579	ILMN_72042	HS.26579	Hs.26579		Hs.26579		19809880	BQ050540			ILMN_1874678	0002640577	S	482	CGCCGCTAGGTGGTGGGTGTGAGTCTTTTGCGGCCTTTAAGTTTCTACGG	10	-	98579950-98579999		AGENCOURT_6808794 NIH_MGC_71 Homo sapiens cDNA clone IMAGE:5784515 5, mRNA sequence					
Homo sapiens	Unigene	Hs.573214	ILMN_125395	HS.573214	Hs.573214		Hs.573214		27841673	BX119270			ILMN_1855809	0007000414	S	591	TGGGGAGGGGTGCTACTGGCACATAGTGCATAGAGTCCAAGAATGTCACC	5	-	118151752-118151801		BX119270 Soares breast 2NbHBst Homo sapiens cDNA clone IMAGp998P23241, mRNA sequence					
Homo sapiens	RefSeq	NM_016146.1	ILMN_27198	TRAPPC4	NM_016146.3	NM_016146.3		51399	145699126	NM_016146.3	TRAPPC4	NP_057230.1	ILMN_1814650	0001230639	S	902	TGGACCTGGGTCATAGGCTGAACCTGTTATGGACCCCCAAATTCTGAGAG	11	+	118399296-118399319:118399320-118399345	11q23.3e	Homo sapiens trafficking protein particle complex 4 (TRAPPC4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [pmid 11018053] [evidence ISS]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [pmid 11018053] [evidence ISS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 11018053] [evidence ISS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [pmid 11018053] [evidence ISS]	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [pmid 11018053] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11018053] [evidence ISS]	SBDN; CGI-104; HSPC172; TRS23; PTD009	SBDN; CGI-104; HSPC172; TRS23; PTD009
Homo sapiens	RefSeq	NM_144643.1	ILMN_19208	SCLT1	NM_144643.2	NM_144643.2		132320	153791838	NM_144643.2	SCLT1	NP_653244.2	ILMN_1797107	0004070050	S	2462	AAGGCGTCTAAGTCAGGCAGAAGAGAGAGCTGCTTCAGCTTCCCAGCAGC	4	-	130025143-130025144:130029284-130029331	4q28.2b	Homo sapiens sodium channel and clathrin linker 1 (SCLT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			FLJ30655; hCAP-1A; FLJ36042; MGC70542	FLJ30655; hCAP-1A; FLJ36042; MGC70542
Homo sapiens	RefSeq	NM_145231.2	ILMN_13424	C14ORF143	NM_145231.2	NM_145231.2		90141	111185955	NM_145231.2	C14orf143	NP_660274.1	ILMN_2193315	0002710176	S	447	GGCAGGTGGCTCCCAAATTACCGGAAAGGACTGTTCTTGAGGTATTCAGG	14	-	90263667-90263668:90397885-90397932	14q32.11a	Homo sapiens chromosome 14 open reading frame 143 (C14orf143), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp547I1415	DKFZp547I1415
Homo sapiens	Unigene	Hs.195391	ILMN_81334	HS.195391	Hs.195391		Hs.195391		27827345	BX094911			ILMN_1910292	0004670692	S	365	GAGGATGAAGAGATTGGCCCGAAACTGGGATGGAGGAGAAGCAGCCAAGG	4	+	13853402-13853451		BX094911 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGp998I115726, mRNA sequence					
Homo sapiens	RefSeq	NM_007110.3	ILMN_2454	TEP1	NM_007110.3	NM_007110.3		7011	21536370	NM_007110.3	TEP1	NP_009041.2	ILMN_1770682	0006380433	S	8229	TTCTTGCATCACTCGCGGGCCCTAGGACCCTAGGATGCCATTCTTGCCAG	14	-	19906082-19906131	14q11.2b	Homo sapiens telomerase-associated protein 1 (TEP1), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits [goid 5697] [pmid 12135483] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7876352] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 7876352] [evidence IDA]	Any recombinational process that contributes to the maintenance of proper telomeric length [goid 722] [pmid 10810353] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Catalyzes extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence [goid 3720] [pmid 12135483] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	VAULT2; TLP1; TROVE1; TP1; p240	VAULT2; TLP1; TP1; TROVE1; p240
Homo sapiens	Unigene	Hs.526759	ILMN_100804	HS.526759	Hs.526759		Hs.526759		15752643	BI761065			ILMN_1820657	0001570315	S	143	GGGGCCAGTGCCACAGAGGAAGAATCGCCCCTGAACTCTCAGAATCCTAA	3	+	127522773-127522822		603043518F1 NIH_MGC_116 Homo sapiens cDNA clone IMAGE:5183932 5, mRNA sequence					
Homo sapiens	RefSeq	NM_004538.3	ILMN_18947	NAP1L3	NM_004538.3	NM_004538.3		4675	45359866	NM_004538.3	NAP1L3	NP_004529.2	ILMN_1785406	0005270431	S	2244	CCAGCCCATAAGACTAAGGGTTTAAATCTGCTTGCACTAGCTGTGCCTTC	X	-	92812971-92813020	Xq21.32a	Homo sapiens nucleosome assembly protein 1-like 3 (NAP1L3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure [goid 5678] [pmid 8976385] [evidence TAS]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 8976385] [evidence TAS]		MB20; NPL3; MGC26312	MB20; NPL3; MGC26312
Homo sapiens	RefSeq	XM_929011.1	ILMN_8452	CLDN9	NM_020982.2	NM_020982.2		9080	44680149	NM_020982.2	CLDN9	NP_066192.1	ILMN_1683757	0003290767	S	33	CTCCCCGTGGCTCAGGTCTCCCCTATCCCGGCCTCCCTGCACTTCACTCT	16	+	3002825-3002874	16p13.3d	Homo sapiens claudin 9 (CLDN9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]		
Homo sapiens	RefSeq	NM_020982.2	ILMN_8452	CLDN9	NM_020982.2	NM_020982.2		9080	44680149	NM_020982.2	CLDN9	NP_066192.1	ILMN_1740276	0006060661	S	1474	CACCTCCCCAGTAATTGTTTCCTTCCGTTGCCCAGGACACTGGCTGGCCT	16	+	3004266-3004315	16p13.3d	Homo sapiens claudin 9 (CLDN9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]		
Homo sapiens	RefSeq	NM_015404.1	ILMN_8468	DFNB31	NM_015404.1	NM_015404.1		25861	45827789	NM_015404.1	DFNB31	NP_056219.1	ILMN_1717434	0001660176	S	3672	CCTCCAGCTAGGACCCAGCCCATCCCCAGATGCCTGAGCCTTTGTCCAAA	9	-	116204481-116204530	9q32e	Homo sapiens deafness, autosomal recessive 31 (DFNB31), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZP434N014; CIP98; WHRN; USH2D; RP11-9M16.1; KIAA1526	DKFZP434N014; CIP98; WHRN; USH2D; RP11-9M16.1; KIAA1526
Homo sapiens	RefSeq	NM_032348.2	ILMN_20155	MXRA8	NM_032348.2	NM_032348.2		54587	39725651	NM_032348.2	MXRA8	NP_115724.1	ILMN_1682778	0002750703	S	1702	CCCCAAAACTGGGGTCAGCCTCAGGGCAGGAGTCCCACTCCTCCAGGGCT	1	-	1288592-1288641	1p36.33a	Homo sapiens matrix-remodelling associated 8 (MXRA8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC3047; DKFZp586E2023	MGC3047; DKFZp586E2023
Homo sapiens	RefSeq	NM_032348.2	ILMN_20155	MXRA8	NM_032348.2	NM_032348.2		54587	39725651	NM_032348.2	MXRA8	NP_115724.1	ILMN_2068257	0001740209	S	428	GGGCTGTACACCTGCAACCTGCACCATCACTACTGCCACCTCTACGAGAG	1	-	1290655-1290704	1p36.33a	Homo sapiens matrix-remodelling associated 8 (MXRA8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC3047; DKFZp586E2023	MGC3047; DKFZp586E2023
Homo sapiens	RefSeq	NM_005356.3	ILMN_19243	LCK	NM_005356.3	NM_005356.3		3932	112789545	NM_005356.3	LCK	NP_005347.3	ILMN_2279844	0000130274	I	60	TGAGACTGTCCAGGCAGCCAGGTTAGGCCAGGAGGACCATGTGAATGGGG	1	+	32489486-32489535	1p35.1b	Homo sapiens lymphocyte-specific protein tyrosine kinase (LCK), transcript variant 2, mRNA.	A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [pmid 7513706] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2014052] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 12732664] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 3265417] [evidence TAS]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [pmid 11739864] [evidence IEP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 16116473] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 16116473] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10358157] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 10799545] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 12884910] [evidence NAS]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [pmid 1579166] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 16116473] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50856] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50862] [pmid 12614355] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 8943371] [evidence IDA]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence IEA]; The process by which calcium ions sequestered in the endoplasmic reticulum or mitochondria are released into the cytosolic compartment [goid 51209] [evidence ISS]; Any process that modulates the frequency, rate or extent of lymphocyte activation [goid 51249] [pmid 7852312] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [pmid 15554700] [evidence IPI]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [pmid 14625311] [evidence IPI]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [pmid 7513706] [evidence IPI]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8506364] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 16245368] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8618896] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 8794306] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 7852312] [evidence IPI]; Interacting selectively with a CD4, a receptor found on the surface of T cells, monocytes and macrophages [goid 42609] [pmid 7486703] [evidence IPI]; Interacting selectively with a CD8, a receptor found on the surface of thymocytes and cytotoxic and suppressor T-lymphocytes [goid 42610] [pmid 2470098] [evidence IPI]; Interacting selectively with a phosphoinositide 3-kinase, any enzyme that catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring [goid 43548] [pmid 7504174] [evidence IPI]; Interacting selectively with an ATPase, any enzyme that catalyzes the hydrolysis of ATP [goid 51117] [pmid 15671290] [evidence IPI]	YT16; p56lck; pp58lck	
Homo sapiens	RefSeq	NR_003105.1	ILMN_166966	ZWILCH	NR_003105.1	NR_003105.1		55055	110578651	NR_003105.1	ZWILCH		ILMN_2374633	0007000743	A	2983	AGGCACTGGACATCCTCACGTGGAGTTCACAGGCTCATCAGTGAATTCTG	15	+	64628582-64628631	15q22.31c	Homo sapiens Zwilch, kinetochore associated, homolog (Drosophila) (ZWILCH), transcript variant 2, transcribed RNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 15824131] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12686595] [evidence IPI]	FLJ10036; FLJ16343; KNTC1AP; MGC111034; hZwilch	FLJ10036; FLJ16343; KNTC1AP; MGC111034; hZwilch
Homo sapiens	RefSeq	NM_014991.3	ILMN_12455	WDFY3	NM_014991.3	NM_014991.3		23001	31317271	NM_014991.3	WDFY3	NP_055806.2	ILMN_1670518	0001580358	I	9771	GGCCTTACTGGGCCACACTGATACCGTCACCTGCGCCACAGCATCATTAG	4	-	85828393-85828442	4q21.23b	Homo sapiens WD repeat and FYVE domain containing 3 (WDFY3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ALFY; KIAA0993; ZFYVE25; MGC16461	ALFY; KIAA0993; ZFYVE25; MGC16461
Homo sapiens	Unigene	Hs.564531	ILMN_117181	HS.564531	Hs.564531		Hs.564531		18966027	BM661908			ILMN_1899696	0007050554	S	228	GGAGGAAATCACGTTAGCCAAGGCATACAGGGCTTTTAGGATGGAAGCAA	13	-	87273963-87274012		UI-E-CK1-abs-c-10-0-UI.s1 UI-E-CK1 Homo sapiens cDNA clone UI-E-CK1-abs-c-10-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_033544.2	ILMN_26177	RCCD1	NM_033544.2	NM_033544.2		91433	63054857	NM_033544.2	RCCD1	NP_291022.2	ILMN_1797738	0004220538	I	74	CTCCTTGGGAGCAGACAGCTGTCCTCACTGGCAGAGGAGGAGCGCTCAGT	15	+	89300034-89300083	15q26.1c	Homo sapiens RCC1 domain containing 1 (RCCD1), transcript variant 1, mRNA.				MGC14386	MGC14386
Homo sapiens	RefSeq	NM_033544.2	ILMN_26177	RCCD1	NM_033544.2	NM_033544.2		91433	63054857	NM_033544.2	RCCD1	NP_291022.2	ILMN_2391324	0002810025	A	2142	CAGCAGGGTGGGGTCTACTGTGGCTAAAATGTCAGGTAGATGCACACTGG	15	+	89306734-89306783	15q26.1c	Homo sapiens RCC1 domain containing 1 (RCCD1), transcript variant 1, mRNA.				MGC14386	MGC14386
Homo sapiens	RefSeq	XM_930670.1	ILMN_38378	LOC642252	XM_930670.1	XM_930670.1		642252	88967472	XM_930670.1	LOC642252	XP_935763.1	ILMN_1767929	0000360059	I	1785	CTTGGTTTGTACCACCAGGCTGGCAATTCAGGACACAAGCAAAGGCACAG	3	+	57621-57670		PREDICTED: Homo sapiens similar to Homogentisate 1,2-dioxygenase (Homogentisicase) (Homogentisate oxygenase) (Homogentisic acid oxidase), transcript variant 6 (LOC642252), mRNA.					
Homo sapiens	RefSeq	XM_939073.1	ILMN_43430	LOC649987	XM_939073.1	XM_939073.1		649987	89031801	XM_939073.1	LOC649987	XP_944166.1	ILMN_1775034	0002340647	S	743	CACCTTGTCCTGTTCTAAGAACTGGCTGCAGATGCATTAAAGTTGTACTC					PREDICTED: Homo sapiens similar to Meiosis expressed protein 1 (LOC649987), mRNA.					
Homo sapiens	RefSeq	XM_001721743.1	ILMN_338028	LOC100134744	XM_001721743.1	XM_001721743.1		100134744	169170519	XM_001721743.1	LOC100134744	XP_001721795.1	ILMN_3238208	0007040113	S	385	CAGTGTTGAGTCATTTCCCACAGTTAAAATCAGGATGAAAATATATAGCT	7	+	76002244-76002293		PREDICTED: Homo sapiens similar to postmeiotic segregation increased 2-like 5 (LOC100134744), mRNA.					
Homo sapiens	RefSeq	XM_932755.1	ILMN_179595	LOC643446	XM_001130649.1	XM_001130649.1		643446	113415499	XM_001130649.1	LOC643446	XP_001130649.1	ILMN_1680302	0000130440	I	327	GAGCCTCCGGACGTGGAGATACAACTCTTGCTCCTAACATTTATCGAGTC	4	+	10982082-10982131	4p15.33e	PREDICTED: Homo sapiens similar to ribonucleic acid binding protein S1 (LOC643446), mRNA.					
Homo sapiens	RefSeq	NM_194071.2	ILMN_180156	CREB3L2	NM_194071.2	NM_194071.2		64764	56550066	NM_194071.2	CREB3L2	NP_919047.2	ILMN_1751097	0000020110	S	6955	AACCAGGGGTTTTAGCTCTGTTCTCTGCTCCCATCCTTCGCTCACCAGCT	7	-	137560175-137560224	7q33d-q34a	Homo sapiens cAMP responsive element binding protein 3-like 2 (CREB3L2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC131709; BBF2H7; MGC71006	BBF2H7; MGC131709; MGC71006
Homo sapiens	RefSeq	NM_020697.2	ILMN_25023	KCNS2	NM_020697.2	NM_020697.2		3788	45433545	NM_020697.2	KCNS2	NP_065748.1	ILMN_2067596	0000360647	S	2949	TGATGCTGTGATTGCCCTGGAGTTCCTGCCATGACATGGAAACCTGGTGG	8	+	99442806-99442855	8q22.2a	Homo sapiens potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2 (KCNS2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KV9.2	KV9.2
Homo sapiens	RefSeq	NR_024089.1	ILMN_364226	NCRNA00162	NR_024089.1	NR_024089.1		378825	197116365	NR_024089.1	NCRNA00162		ILMN_3243783	0007510240	S	474	TACCCAAGAGGAGACCGCACAAGCCACGGCCAACGTGGAGCTCTAACTCA	21	-	46419332-46419381		Homo sapiens non-protein coding RNA 162 (NCRNA00162), non-coding RNA.					
Homo sapiens	RefSeq	NM_001080831.1	ILMN_167294	LOC401019	NM_001080831.1	NM_001080831.1		401019	124249379	NM_001080831.1	LOC401019	NP_001074300.1	ILMN_2046856	0005490603	S	466	CCCTCTCAAGTAATGGCTCAGCTAATAAAGGCGCACATGACTCCCAAAAA				2q31.1c	Homo sapiens hCG1783417 (LOC401019), mRNA.					
Homo sapiens	RefSeq	XR_038201.1	ILMN_335543	LOC401076	XR_038201.1	XR_038201.1		401076	169165503	XR_038201.1	LOC401076		ILMN_3199780	0004920379	A	2033	GCTGTAGCAGTGTCCTTCATCCAGGGAAGTTAATGGAGTCTTGGACCCTT				3p12.3c	PREDICTED: Homo sapiens misc_RNA (LOC401076), miscRNA.					
Homo sapiens	RefSeq	XM_944850.1	ILMN_42330	SLC45A4	XM_933796.2	XM_933796.2		57210	113420198	XM_933796.2	SLC45A4	XP_938889.2	ILMN_1745778	0003310632	A	6984	CTGTTTCTTTGCCAGGTGAATGTTTGTGGCATGCGCTGCTGTCCGCGCCC	8	-	142286571-142286620	8q24.3c	PREDICTED: Homo sapiens solute carrier family 45, member 4, transcript variant 2 (SLC45A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Homo sapiens	RefSeq	NM_022122.2	ILMN_12894	MMP27	NM_022122.2	NM_022122.2		64066	73808267	NM_022122.2	MMP27	NP_071405.2	ILMN_1679694	0004830326	S	1199	GGGCATTTGGTGCTGGAGGTTTGATGAAATGACCCAAACCATGGACAAAG	11	-	102563740-102563772:102564637-102564653	11q22.2b	Homo sapiens matrix metallopeptidase 27 (MMP27), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MMP-27	MMP-27
Homo sapiens	RefSeq	XM_001716210.1	ILMN_347006	LOC100134071	XM_001716210.1	XM_001716210.1		100134071	169163720	XM_001716210.1	LOC100134071	XP_001716262.1	ILMN_3245179	0000050703	S	245	GCAGAGCAAGGGAAGCGGCGTTTGATGCCGAACAACAGAGAAATCCTCGG					PREDICTED: Homo sapiens similar to EID2 protein (LOC100134071), mRNA.					
Homo sapiens	RefSeq	NM_006528.2	ILMN_17570	TFPI2	NM_006528.2	NM_006528.2		7980	31543803	NM_006528.2	TFPI2	NP_006519.1	ILMN_2068104	0005080543	S	726	GATGCCAAAGCTTCGCTTTGCCAGTAGAATCCGGAAAATTCGGAAGAAGC	7	-	93516139-93516188	7q21.3a	Homo sapiens tissue factor pathway inhibitor 2 (TFPI2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 8914837] [evidence TAS]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 8914837] [evidence TAS]	TFPI-2; PP5; FLJ21164	TFPI-2; PP5; FLJ21164
Homo sapiens	RefSeq	NM_018837.2	ILMN_18271	SULF2	NM_018837.2	NM_018837.2		55959	38327656	NM_018837.2	SULF2	NP_061325.1	ILMN_1686981	0006330487	I	2862	GTTTCAGCGTCGAAAGTGGCCAGAAATGAAGAGACCTTCTTCCAAATCAC	20	-	45721550-45721599	20q13.12c-q13.13a	Homo sapiens sulfatase 2 (SULF2), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 12368295] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12368295] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving any proteoglycan containing heparan sulfate, any member of a group of glycosaminoglycans that have repeat units consisting of alternating alpha1->4 linked hexuronic acid and glucosamine residues, the former being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter being either sulfated or acetylated on its amino group as well as sulfated on one of its hydroxyl groups [goid 30201] [pmid 12368295] [evidence NAS]	Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 12368295] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC126411; FLJ90554; KIAA1247; HSULF-2; DKFZp313E091	MGC126411; FLJ90554; KIAA1247; HSULF-2; DKFZp313E091
Homo sapiens	RefSeq	NM_018837.2	ILMN_18271	SULF2	NM_018837.2	NM_018837.2		55959	38327656	NM_018837.2	SULF2	NP_061325.1	ILMN_1667460	0007200242	A	3389	CAGGACAGAGGCAACGTGGAGAGGCTGAAAACAGTGCAGAGACGTTTGAC	20	-	45720017-45720066	20q13.12c-q13.13a	Homo sapiens sulfatase 2 (SULF2), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 12368295] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12368295] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving any proteoglycan containing heparan sulfate, any member of a group of glycosaminoglycans that have repeat units consisting of alternating alpha1->4 linked hexuronic acid and glucosamine residues, the former being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter being either sulfated or acetylated on its amino group as well as sulfated on one of its hydroxyl groups [goid 30201] [pmid 12368295] [evidence NAS]	Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 12368295] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC126411; FLJ90554; KIAA1247; HSULF-2; DKFZp313E091	MGC126411; FLJ90554; KIAA1247; HSULF-2; DKFZp313E091
Homo sapiens	RefSeq	NM_018837.2	ILMN_18271	SULF2	NM_018837.2	NM_018837.2		55959	38327656	NM_018837.2	SULF2	NP_061325.1	ILMN_2345142	0004050128	A	3637	ATCCCTCGCAGTTGTGGACATTTCTGTTCCTGTCCAGATACCATTTCTCC	20	-	45719769-45719818	20q13.12c-q13.13a	Homo sapiens sulfatase 2 (SULF2), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 12368295] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12368295] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving any proteoglycan containing heparan sulfate, any member of a group of glycosaminoglycans that have repeat units consisting of alternating alpha1->4 linked hexuronic acid and glucosamine residues, the former being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids, and the latter being either sulfated or acetylated on its amino group as well as sulfated on one of its hydroxyl groups [goid 30201] [pmid 12368295] [evidence NAS]	Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 12368295] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC126411; FLJ90554; KIAA1247; HSULF-2; DKFZp313E091	MGC126411; FLJ90554; KIAA1247; HSULF-2; DKFZp313E091
Homo sapiens	RefSeq	XM_941832.1	ILMN_45100	LOC652396	XM_941832.1	XM_941832.1		652396	89062743	XM_941832.1	LOC652396	XP_946925.1	ILMN_1756960	0002190343	S	168	TCCCCGCGTTGGACCTCTGGACACCTTGGGACAGCACACTCCACGCGGAA					PREDICTED: Homo sapiens similar to double homeobox, 4 (LOC652396), mRNA.					
Homo sapiens	RefSeq	NM_194434.2	ILMN_22710	VAPA	NM_194434.2	NM_194434.2		9218	94721251	NM_194434.2	VAPA	NP_919415.2	ILMN_2405190	0005420341	A	6314	GGAAATGGCTTATGTAACCTACAAGACTGGAGAACAGAATGTGACTGGCC	18	+	9948757-9948806	18p11.22b	Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa (VAPA), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10523508] [evidence IDA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [pmid 10523508] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any small, fluid-filled, spherical organelle enclosed by membrane or protein [goid 31982] [pmid 10523508] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 16895911] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 9657962] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16895911] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9920726] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16227268] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC3745; hVAP-33; VAP33; VAP-A; VAP-33	MGC3745; hVAP-33; VAP33; VAP-33; VAP-A
Homo sapiens	RefSeq	NM_144615.1	ILMN_10842	TMIGD2	NM_144615.1	NM_144615.1		126259	21389428	NM_144615.1	TMIGD2	NP_653216.1	ILMN_2160577	0006400475	S	863	CCAAAAGGGTTCCCCAAAGTGGGAGAGGAGTGAGAGATCCCAGGAGACCT	19	-	4292578-4292595:4292596-4292627	19p13.3d	Homo sapiens transmembrane and immunoglobulin domain containing 2 (TMIGD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC23244	MGC23244
Homo sapiens	RefSeq	XM_927722.1	ILMN_165963	LOC727848	XM_001125941.1	XM_001125941.1		727848	113424510	XM_001125941.1	LOC727848	XP_001125941.1	ILMN_1768558	0000780072	S	822	CAGCTATGAGCTGCCCAACGGCCAGGTCATCACCATTAGCAACGAGCGGT	14	+	18655511-18655560	14q11.1d	PREDICTED: Homo sapiens similar to actin-like protein (LOC727848), mRNA.					
Homo sapiens	RefSeq	XM_926019.1	ILMN_165963	LOC727848	XM_001125941.1	XM_001125941.1		727848	113424510	XM_001125941.1	LOC727848	XP_001125941.1	ILMN_1799837	0002940324	S	821	ACAGCTATGAGCTGCCCAACGGCCAGGTCATCACCATTAGCAACGAGCGG	14	+	18655510-18655559	14q11.1d	PREDICTED: Homo sapiens similar to actin-like protein (LOC727848), mRNA.					
Homo sapiens	RefSeq	XR_041490.1	ILMN_348033	FLJ32790	XR_041490.1	XR_041490.1		642696	169209803	XR_041490.1	FLJ32790		ILMN_3191647	0000990593	A	1111	CCTTAAATGTTTAAGAGGCAGGTCTTGCTCTGTTGCCCAGGCTGGGGTAC	16	-	12088917-12088966	16p13.13a	PREDICTED: Homo sapiens misc_RNA (FLJ32790), miscRNA.					
Homo sapiens	RefSeq	NM_022153.1	ILMN_174163	C10ORF54	NM_022153.1	NM_022153.1		64115	62339431	NM_022153.1	C10orf54	NP_071436.1	ILMN_2205963	0006620292	S	4647	TGTTTGATCCACCCCCTTCCCTGAAAATCCTGGGAGGTTTTATTGCTGCC	10	-	73507390-73507439	10q22.1d-q22.1e	Homo sapiens chromosome 10 open reading frame 54 (C10orf54), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PP2135; GI24; SISP1	PP2135; GI24; SISP1
Homo sapiens	RefSeq	NM_003821.4	ILMN_19402	RIPK2	NM_003821.5	NM_003821.5		8767	93141034	NM_003821.5	RIPK2	NP_003812.1	ILMN_1758939	0004150520	S	1669	CAGAAGCCTGCCTTAACCAGTCGCTAGATGCCCTTCTGTCCAGGGACTTG	8	+	90802376-90802425	8q21.3d	Homo sapiens receptor-interacting serine-threonine kinase 2 (RIPK2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17468049] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9705938] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9642260] [evidence TAS]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 17468049] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9642260] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9642260] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions [goid 30274] [pmid 15657077] [evidence IPI]; Interacting selectively with a CARD (N-terminal caspase recruitment) domain, a protein-protein interaction domain that belongs to the death domain-fold superfamily. These protein molecule families are similar in structure with each consisting of six or seven anti-parallel alpha-helices that form highly specific homophilic interactions between signaling partners. CARD exists in the N-terminal prodomains of several caspases and in apoptosis-regulatory proteins and mediates the assembly of CARD-containing proteins that participate in activation or suppression of CARD carrying members of the caspase family [goid 50700] [pmid 11087742] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	RIP2; GIG30; RICK; CARDIAK; CARD3; CCK	GIG30; RIP2; RICK; CARDIAK; CARD3
Homo sapiens	RefSeq	XM_062025.5	ILMN_46397	LOC120364	XM_937967.1	XM_937967.1		120364	89035134	XM_937967.1	LOC120364	XP_943060.1	ILMN_1672614	0007380594	S	712	GGCTATAATGGATTTGGTAATGATGGAAAGAATTTTGGAGGTGGTAGCAG				11q23.1a	PREDICTED: Homo sapiens similar to heterogeneous nuclear ribonucleoprotein A1-like (LOC120364), mRNA.					
Homo sapiens	RefSeq	XM_001719102.1	ILMN_340394	LOC100129958	XM_001719102.1	XM_001719102.1		100129958	169169467	XM_001719102.1	LOC100129958	XP_001719154.1	ILMN_3182942	0001050300	A	417	CAGGAAGGACATGGATGATGCTTACGTGAACAAGGCTGAGACTGAGGGCC	6	+	162909920-162909953:162910253-162910268	6q26b	PREDICTED: Homo sapiens similar to hCG1643231 (LOC100129958), mRNA.					
Homo sapiens	RefSeq	NM_021938.3	ILMN_8461	BRUNOL5	NM_021938.3	NM_021938.3		60680	68303810	NM_021938.3	BRUNOL5	NP_068757.2	ILMN_1672871	0006290307	S	1448	CTCAAAGTCCAGCTGAAGCGGCCCAAAGACCCGGGACACCCCTACTGACC	19	+	3236952-3237001	19p13.3f	Homo sapiens bruno-like 5, RNA binding protein (Drosophila) (BRUNOL5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	BRUNOL-5; CELF5	BRUNOL-5; CELF5
Homo sapiens	RefSeq	NM_002395.2	ILMN_165824	ME1	NM_002395.3	NM_002395.3		4199	112382261	NM_002395.3	ME1	NP_002386.1	ILMN_1736042	0003390326	S	1686	CCACAGTTTATCCTGAACCGCAAAACAAAGAAGCATTTGTCCGCTCCCAG	6	-	84006069-84006074:84020067-84020110	6q14.2a	Homo sapiens malic enzyme 1, NADP(+)-dependent, cytosolic (ME1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 8187880] [evidence NAS]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [pmid 8187880] [evidence IDA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [pmid 7622060] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; biosynthesis may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6741] [pmid 8187880] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbohydrate stimulus [goid 9743] [pmid 8187880] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-malate + NADP+ = pyruvate + CO2 + NADPH + H+. Also decarboxylates oxaloacetate [goid 4473] [evidence ISS]; Catalysis of the reaction: (S)-malate + NADP+ = pyruvate + CO2 + NADPH + H+. Also decarboxylates oxaloacetate [goid 4473] [pmid 8187880] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 7622060] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 7622060] [evidence IDA]; Interacting selectively with ADP, adenosine 5'-diphosphate [goid 43531] [pmid 7622060] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 7622060] [evidence TAS]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [pmid 7622060] [evidence TAS]	MES; HUMNDME	MES; HUMNDME
Homo sapiens	RefSeq	XR_017413.1	ILMN_169253	LOC644384	XR_017413.1	XR_017413.1		644384	113424560	XR_017413.1	LOC644384		ILMN_3202889	0000430504	A	235	CTGTGGACCACTGAGTCCGCCATGAAGAAGATAGAAGACAACACCACATA	14	+	34025170-34025219	14q13.1c	PREDICTED: Homo sapiens misc_RNA (LOC644384), miscRNA.					
Homo sapiens	Unigene	Hs.578383	ILMN_130564	HS.578383	Hs.578383		Hs.578383		51587102	CR736179			ILMN_1816395	0007560563	S	214	AGAGAAGCGAGTGGAGGCTGGGACAGATGGTGCCCTGAAGTGTGGGTCAA	14	+	102634804-102634853		CR736179 Soares_fetal_lung_NbHL19W Homo sapiens cDNA clone IMAGp971A1684 ; IMAGE:1952157 5, mRNA sequence					
Homo sapiens	RefSeq	XM_930834.1	ILMN_175715	LOC729786	XR_015655.1	XR_015655.1		729786	113425046	XR_015655.1	LOC729786		ILMN_1791605	0000520497	A	1716	CTCACTGACAGCGTGGAGCCTGTGCAAGGAGAGACCAGGGAGGGTTCTCC	15	+	19037911-19037960	15q11.2a	PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a, 8A (LOC729786), mRNA.					
Homo sapiens	Unigene	Hs.575075	ILMN_127256	HS.575075	Hs.575075		Hs.575075		19609384	BM984154			ILMN_1883432	0004250682	S	501	GCAGGTGCTTTATGGGTACTTCTCATCTTGTGTCACTCTACTTAAGGACC					UI-CF-DU1-abf-c-15-0-UI.s1 UI-CF-DU1 Homo sapiens cDNA clone UI-CF-DU1-abf-c-15-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001025234.1	ILMN_9896	TSPAN4	NM_001025234.1	NM_001025234.1		7106	68799996	NM_001025234.1	TSPAN4	NP_001020405.1	ILMN_1720908	0006420747	I	47	AGTAACGGTGGCCTGGGGTCAGAGCCAGGTTCAGCTGCGAGGCTGCTGGT	11	+	834127-834176	11p15.5c	Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9360996] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9360996] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9360996] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NAG-2; NAG2; TETRASPAN; TM4SF7; TSPAN-4	NAG-2; NAG2; TETRASPAN; TM4SF7; TSPAN-4
Homo sapiens	RefSeq	NM_001017371.3	ILMN_15110	SP3	NM_001017371.3	NM_001017371.3		6670	67078402	NM_001017371.3	SP3	NP_001017371.1	ILMN_1691171	0004570435	I	249	AGTCGTACTTCCTGTGCGAAAGGCGGCCCGACCCTAACCGCCACCCCCTC	2	-	174828649-174828698	2q31.1f	Homo sapiens Sp3 transcription factor (SP3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12560508] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 12560508] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [evidence IEA]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16696853] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9278495] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 9278495] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686O1631; SPR-2	DKFZp686O1631; SPR-2
Homo sapiens	RefSeq	NM_001017371.3	ILMN_15110	SP3	NM_001017371.3	NM_001017371.3		6670	67078402	NM_001017371.3	SP3	NP_001017371.1	ILMN_1756942	0007150274	A	3358	GCAGTGATTTTTATCCAATCTTGTTTCCAAAAACCATGTCTCCCAGGGCC	2	-	174773787-174773836	2q31.1f	Homo sapiens Sp3 transcription factor (SP3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12560508] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 12560508] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [evidence IEA]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16696853] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9278495] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 9278495] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686O1631; SPR-2	DKFZp686O1631; SPR-2
Homo sapiens	RefSeq	NM_001017371.3	ILMN_15110	SP3	NM_001017371.3	NM_001017371.3		6670	67078402	NM_001017371.3	SP3	NP_001017371.1	ILMN_2389844	0001230593	A	3754	AGAGCTATACAGTTTTCCTAAATGTATACCTGTAACTGCAGCAGTTCACC	2	-	174773391-174773440	2q31.1f	Homo sapiens Sp3 transcription factor (SP3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12560508] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 12560508] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; The process by which a precursor cell type acquires characteristics of a more mature T-cell. A T cell is a type of lymphocyte whose definin characteristic is the expression of a T cell receptor complex [goid 30217] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [evidence IEA]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16696853] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9278495] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 9278495] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686O1631; SPR-2	DKFZp686O1631; SPR-2
Homo sapiens	RefSeq	NM_001017915.1	ILMN_3672	INPP5D	NM_005541.3	NM_005541.3		3635	64085176	NM_005541.3	INPP5D	NP_005532.2	ILMN_1744212	0003130609	A	4659	CCAGGGAGGGTGGGCCTCTTGGTTCCAGGCTCTTGAAATAGTGCAGCCTT	2	+	234115523-234115572	2q37.1d	Homo sapiens inositol polyphosphate-5-phosphatase, 145kDa (INPP5D), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10350061] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 8769125] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8769125] [evidence TAS]	Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [pmid 8769125] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12029088] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	hp51CN; MGC142140; SHIP; MGC142142; SIP-145; SHIP1; MGC104855	hp51CN; MGC142140; SHIP; MGC142142; SIP-145; SHIP1; MGC104855
Homo sapiens	RefSeq	NM_152356.3	ILMN_42402	ZNF491	NM_152356.3	NM_152356.3		126069	87116672	NM_152356.3	ZNF491	NP_689569.2	ILMN_2222695	0007330750	S	2049	GACTGTCATGGGTGGGGAATGTTCTCTGATGCTCAACTCCCCTAGTCTGC	19	+	11779532-11779581	19p13.2a	Homo sapiens zinc finger protein 491 (ZNF491), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126639; MGC126641; FLJ34791	MGC126639; MGC126641; FLJ34791
Homo sapiens	RefSeq	XM_941070.1	ILMN_9040	CEACAM16	NM_001039213.1	NM_001039213.1		388551	85861201	NM_001039213.1	CEACAM16	NP_001034302.1	ILMN_1775167	0003450026	A	1487	GCTGAACCTCACAGACACTGGCCGCTACACACTCAAGACCGTCACAGTGC	19	+	45211368-45211417	19q13.31b	Homo sapiens carcinoembryonic antigen-related cell adhesion molecule 16 (CEACAM16), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			CEAL2	
Homo sapiens	RefSeq	NM_152470.2	ILMN_14516	RNF165	NM_152470.2	NM_152470.2		494470	57165360	NM_152470.2	RNF165	NP_689683.2	ILMN_1792389	0000010019	S	4737	CTGTAGCAACGTCTGTCAGGCCCCCTTGTGTTTCATCTCCTGCGCGCGTA	18	+	42294242-42294291	18q21.1a	Homo sapiens ring finger protein 165 (RNF165), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_130386.1	ILMN_4310	COLEC12	NM_130386.1	NM_130386.1		81035	18641359	NM_130386.1	COLEC12	NP_569057.1	ILMN_1689088	0002100767	A	2615	GTGCACATGGACTGAATCACATAGATTCTCCTCCGTCAGTAACCGTGCGA	18	-	309780-309829	18p11.32c	Homo sapiens collectin sub-family member 12 (COLEC12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11564734] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [pmid 11564734] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A series of molecular signals mediated by the detection of carbohydrate [goid 9756] [pmid 11564734] [evidence NAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 11564734] [evidence TAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 11564734] [evidence NAS]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [pmid 11564734] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with the aldohexose galactose (galacto-hexose), a common constituent of many oligo- and polysaccharides [goid 5534] [pmid 11564734] [evidence NAS]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [pmid 11564734] [evidence IDA]; Interacting selectively with low-density lipoprotein, one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 30169] [pmid 11564734] [evidence IDA]	CLP1; SCARA4; SRCL; NSR2	CLP1; SCARA4; SRCL; NSR2
Homo sapiens	RefSeq	NM_031914.1	ILMN_25569	SYT16	NM_031914.2	NM_031914.2		83851	123173751	NM_031914.2	SYT16	NP_114120.2	ILMN_1670725	0005670041	S	1721	GCTGTTGGTGGGGCTCTCGTACAATGCCACAACGGGGCGATTATCTGTGG	14	+	61620756-61620805	14q23.2a	Homo sapiens synaptotagmin XVI (SYT16), mRNA.				yt14r; Strep14; SYT14L; syt14r; CHR14SYT	yt14r; Strep14; SYT14L; syt14r; CHR14SYT
Homo sapiens	RefSeq	XM_932271.1	ILMN_43731	LOC644629	XM_932271.1	XM_932271.1		644629	88953445	XM_932271.1	LOC644629	XP_937364.1	ILMN_1744426	0006860064	S	445	GCCTCCTACCTGGCTGCTAAAAATGGGGGCTCACAGATCACACAGCAGGC	2	-	105311668-105311717		PREDICTED: Homo sapiens hypothetical protein LOC644629 (LOC644629), mRNA.					
Homo sapiens	RefSeq	NM_173858.1	ILMN_28446	VN1R5	NM_173858.1	NM_173858.1		317705	27777674	NM_173858.1	VN1R5	NP_776257.1	ILMN_1767070	0007650332	S	744	CTATCTCAGTGCCTTCACACAGCCAGCCTGTCCCCGAGTCTCACCAGTGA	1	+	245486740-245486789	1q44e	Homo sapiens vomeronasal 1 receptor 5 (gene/pseudogene) (VN1R5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus [goid 19236] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a pheromone to initiate a change in cell activity [goid 16503] [evidence IEA]	V1RL5	V1RL5
Homo sapiens	RefSeq	NM_020877.2	ILMN_13178	DNAH2	NM_020877.2	NM_020877.2		146754	75677364	NM_020877.2	DNAH2	NP_065928.2	ILMN_1714296	0006860689	S	13388	CTCAGACTTTGACCTTGGCCGAATTTGTGTGATGTGGCCCTGGAGATACC	17	+	7663014-7663063	17p13.1d	Homo sapiens dynein, axonemal, heavy chain 2 (DNAH2), mRNA.	A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [pmid 9256245] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]	Cell motility due to movement of cilia or flagella [goid 1539] [pmid 9256245] [evidence NAS]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 9256245] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	FLJ46675; DNAHC2; DNHD3; KIAA1503	FLJ46675; DNAHC2; DNHD3; KIAA1503
Homo sapiens	RefSeq	XR_037911.1	ILMN_338596	LOC652030	XR_037911.1	XR_037911.1		652030	169207797	XR_037911.1	LOC652030		ILMN_3238598	0000630019	S	258	GCGGGCCTTGCCGTACTACTGTCATGCTGTCACCTCTCACGACTATGACG					PREDICTED: Homo sapiens misc_RNA (LOC652030), miscRNA.					
Homo sapiens	Unigene	Hs.445179	ILMN_92951	HS.445179	Hs.445179		Hs.445179		7456977	AW664435			ILMN_1833009	0002140025	S	111	GAAGGACTGATTTACAACACAGGGGGAAAAGCCCATTACTGTATGTCTCC	6	-	138537146-138537195		hi12a04.x1 NCI_CGAP_GU1 Homo sapiens cDNA clone IMAGE:2972046 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015291.1	ILMN_562	DNAJC16	NM_015291.2	NM_015291.2		23341	82524312	NM_015291.2	DNAJC16	NP_056106.1	ILMN_1717078	0004280072	S	2280	GGAAGCCATAGGGTCGTGCAGTGATGTTGACTCTTCCCTCTACCTGGGTG	1	+	15767070-15767119	1p36.21a	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 16 (DNAJC16), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	RP4-680D5.1; DKFZp781I1547; DKFZp686G1298; DKFZp686N0387; KIAA0962	RP4-680D5.1; DKFZp781I1547; DKFZp686G1298; DKFZp686N0387; KIAA0962
Homo sapiens	RefSeq	NM_006358.2	ILMN_21822	SLC25A17	NM_006358.2	NM_006358.2		10478	33239438	NM_006358.2	SLC25A17	NP_006349.1	ILMN_1737312	0002490403	S	1998	GGAAACCTTCCTTAGAGTCCTGTTGCTCAGTGTGGTCCATCAGACGGTAG	22	-	41165854-41165903	22q13.2a	Homo sapiens solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 (SLC25A17), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 9874197] [evidence TAS]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9874197] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9874197] [evidence TAS]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10704444] [evidence IPI]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	PMP34	PMP34
Homo sapiens	RefSeq	XM_937734.1	ILMN_43052	LOC648667	XM_937734.1	XM_937734.1		648667	89065757	XM_937734.1	LOC648667	XP_942827.1	ILMN_1807889	0002370681	S	80	TTGAGTCCAGCCTGGGAGAGTGGGCGATGAAGCCCGTTCTTGAAATCTGA					PREDICTED: Homo sapiens similar to GRB2-related adaptor protein (LOC648667), mRNA.					
Homo sapiens	RefSeq	XR_037559.1	ILMN_335016	LOC401980	XR_037559.1	XR_037559.1		401980	169161976	XR_037559.1	LOC401980		ILMN_3275585	0002940114	M	1115	TGGAACCGGGCTATGACCCCCAGGAGGATCCCAAAAGCTGTGCTCGCTAT				1q32.1d	PREDICTED: Homo sapiens misc_RNA (LOC401980), miscRNA.					
Homo sapiens	RefSeq	NM_000367.2	ILMN_24693	TPMT	NM_000367.2	NM_000367.2		7172	62953142	NM_000367.2	TPMT	NP_000358.1	ILMN_1740185	0000840014	S	3040	AAACACCCTGTGTCCATGGGATAGAGTCCTTTCCGCTTGCAGTTGTGCCC	6	-	18236681-18236730	6p22.3d	Homo sapiens thiopurine S-methyltransferase (TPMT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 8316220] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-methionine + a thiopurine = S-adenosyl-L-homocysteine + a thiopurine S-methylether [goid 8119] [pmid 8316220] [evidence TAS]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XR_037117.1	ILMN_348720	LOC100128410	XR_037117.1	XR_037117.1		100128410	169216866	XR_037117.1	LOC100128410		ILMN_3268914	0001230209	M	845	GACTGACCAGGAGGCTATTCAAGATCTCTGGCAGTGGTGGAAGTCTCTTG	X	+	123242905-123242954	Xq25c	PREDICTED: Homo sapiens misc_RNA (LOC100128410), miscRNA.					
Homo sapiens	RefSeq	XR_037117.1	ILMN_348720	LOC100128410	XR_037117.1	XR_037117.1		100128410	169216866	XR_037117.1	LOC100128410		ILMN_3192446	0000990242	A	409	GTATATCTGGAAAGTGATCTGTCCCTGGAGGTGGTAGCAAGTTTCCACGG	X	+	123242469-123242518	Xq25c	PREDICTED: Homo sapiens misc_RNA (LOC100128410), miscRNA.					
Homo sapiens	RefSeq	NM_001752.2	ILMN_170506	CAT	NM_001752.2	NM_001752.2		847	60302919	NM_001752.2	CAT	NP_001743.1	ILMN_2151739	0001240446	S	2104	ACATTTAATACAGCAGTGTCATCAGAAGATAACTTGAGCACCGTCATGGC	11	+	34449993-34450042	11p13c	Homo sapiens catalase (CAT), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 18379038] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [pmid 16644728] [evidence IMP]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [pmid 17053817] [evidence IMP]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [pmid 16644728] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [pmid 18379038] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 16644728] [evidence IMP]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [pmid 11134921] [evidence IDA]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [pmid 10656833] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [pmid 18379038] [evidence IDA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [pmid 16644728] [evidence IDA]; Catalysis of the reaction: 2 H2O2 = O2 + 2 H2O [goid 4096] [pmid 18312938] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [pmid 10656833] [evidence IDA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [pmid 11134921] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10656833] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 10656833] [evidence IDA]	MGC138424; MGC138422	MGC138424; MGC138422
Homo sapiens	RefSeq	NM_021991.1	ILMN_2607	JUP	NM_021991.1	NM_021991.1		3728	12056467	NM_021991.1	JUP	NP_068831.1	ILMN_2366864	0000110634	A	2419	ACAGAAAAGTGCCTGAGCTGGGGAAGCCGGGGTGTAACTTCCTGCTGCAC	17	-	37165112-37165161	17q21.2b	Homo sapiens junction plakoglobin (JUP), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 1639850] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1639850] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1639850] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 1639850] [evidence TAS]; An adherens junction which connects two cells to each other [goid 5913] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 1639850] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [pmid 1639850] [evidence TAS]	PKGB; CTNNG; ARVD12; PDGB; DPIII; DP3	PKGB; CTNNG; ARVD12; PDGB; DPIII; DP3
Homo sapiens	RefSeq	NM_001126.2	ILMN_9592	ADSS	NM_001126.2	NM_001126.2		159	34577062	NM_001126.2	ADSS	NP_001117.2	ILMN_1778796	0006020333	S	1275	GTTTGGTGTAACTACTGGAAGGAAAAGAAGATGTGGCTGGTTGGACCTCG	1	-	244580969-244581018	1q44b	Homo sapiens adenylosuccinate synthase (ADSS), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats [goid 2376] [pmid 15786719] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate [goid 6167] [pmid 1592113] [evidence NAS]; The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate [goid 6167] [pmid 2004783] [evidence IDA]; The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate [goid 6167] [pmid 15786719] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [pmid 1592113] [evidence NAS]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [pmid 2004783] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 1592113] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 15786719] [evidence NAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with phosphate [goid 42301] [pmid 1592113] [evidence NAS]; Interacting selectively with phosphate [goid 42301] [pmid 15786719] [evidence NAS]	ADEH; MGC20404	ADEH; MGC20404
Homo sapiens	RefSeq	NM_001126.2	ILMN_9592	ADSS	NM_001126.2	NM_001126.2		159	34577062	NM_001126.2	ADSS	NP_001117.2	ILMN_2092664	0005960097	S	2486	TCTAGTGGATTGGTTTTCAACATCGTGCCTGCCGATATGCCTACAGAATC	1	-	244572017-244572066	1q44b	Homo sapiens adenylosuccinate synthase (ADSS), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats [goid 2376] [pmid 15786719] [evidence NAS]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate [goid 6167] [pmid 1592113] [evidence NAS]; The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate [goid 6167] [pmid 2004783] [evidence IDA]; The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate [goid 6167] [pmid 15786719] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [pmid 1592113] [evidence NAS]; Catalysis of the reaction: GTP + IMP + L-aspartate = GDP + phosphate + N6-(1,2-dicarboxyethyl)-AMP [goid 4019] [pmid 2004783] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 1592113] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 15786719] [evidence NAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with phosphate [goid 42301] [pmid 1592113] [evidence NAS]; Interacting selectively with phosphate [goid 42301] [pmid 15786719] [evidence NAS]	ADEH; MGC20404	ADEH; MGC20404
Homo sapiens	RefSeq	XM_499025.2	ILMN_30910	LOC441127	XM_499025.2	XM_499025.2		441127	88990486	XM_499025.2	LOC441127	XP_499025.2	ILMN_1758205	0006520519	S	181	GGAATGGAGCCGCCATGTCTGGTGCTCAAGCGGCCAGCTCTGACCCAGAG	6	+	5797319-5797321:5797322-5797368		PREDICTED: Homo sapiens hypothetical LOC441127 (LOC441127), mRNA.					
Homo sapiens	RefSeq	NM_152722.4	ILMN_18633	HEPACAM	NM_152722.4	NM_152722.4		220296	121674800	NM_152722.4	HEPACAM	NP_689935.2	ILMN_2138019	0004830414	S	1824	GTGCGCGGAGGCGGCAGTGTTGATATGGTGAAACCGGGTCGCATTTGCTT	11	-	124790817-124790866	11q24.2a	Homo sapiens hepatocyte cell adhesion molecule (HEPACAM), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ25530	hepaCAM
Homo sapiens	RefSeq	NM_152722.3	ILMN_18633	HEPACAM	NM_152722.4	NM_152722.4		220296	121674800	NM_152722.4	HEPACAM	NP_689935.2	ILMN_1659316	0007050333	S	3293	GGAGTACCTGCTGGTCAGCCTTGAGATGCACAGGTGAAGGTTAGGGTGAG	11	-	124789348-124789397	11q24.2a	Homo sapiens hepatocyte cell adhesion molecule (HEPACAM), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ25530	hepaCAM
Homo sapiens	RefSeq	NM_000092.3	ILMN_173215	COL4A4	NM_000092.4	NM_000092.4		1286	116256355	NM_000092.4	COL4A4	NP_000083.3	ILMN_1778308	0004010730	S	7687	CCTGTTCATCTTGAACTTGGCCTGAGAACATTTTCTGGGAAGAGGTAAGG	2	-	227870031-227870080	2q36.3b	Homo sapiens collagen, type IV, alpha 4 (COL4A4), mRNA.	Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [pmid 7523402] [evidence IDA]	Any process that results in an increase in the efficacy of transmission at a neuromuscular synapse [goid 42062] [pmid 2211832] [evidence IDA]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence ISS]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 8253711] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	CA44	CA44
Homo sapiens	RefSeq	NM_139242.2	ILMN_17415	MTFMT	NM_139242.2	NM_139242.2		123263	31543267	NM_139242.2	MTFMT	NP_640335.1	ILMN_1672884	0003940215	S	1055	TGGATATTTGCACCCCTGGTACCAGAAAAATTCCCAAGCTCAACCAAGCC	15	-	63082532-63082581	15q22.31b	Homo sapiens mitochondrial methionyl-tRNA formyltransferase (MTFMT), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA [goid 4479] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FMT1	FMT1
Homo sapiens	Unigene	Hs.550254	ILMN_110243	HS.550254	Hs.550254		Hs.550254		21757400	AK097584			ILMN_1870717	0006450544	S	1338	TGTGGGTGAACGGCGGCACCTGAAAGCCTCAGTTTCCCTGTCTGTGAAGG	10	-	134184509-134184558		Homo sapiens cDNA FLJ40265 fis, clone TESTI2026291					
Homo sapiens	RefSeq	NM_005752.2	ILMN_10974	CLEC3A	NM_005752.2	NM_005752.2		10143	62751806	NM_005752.2	CLEC3A	NP_005743.2	ILMN_2220729	0007160376	S	1153	CTCCTGGTGGGACTTGTATCTTGTCTGCCATATCAGAACACAAACCCCTG	16	+	76622765-76622814	16q23.1d	Homo sapiens C-type lectin domain family 3, member A (CLEC3A), mRNA.		The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10524194] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 10524194] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	MGC129558; CLECSF1; MGC129559	MGC129558; CLECSF1; MGC129559
Homo sapiens	RefSeq	NM_005752.2	ILMN_10974	CLEC3A	NM_005752.2	NM_005752.2		10143	62751806	NM_005752.2	CLEC3A	NP_005743.2	ILMN_2220735	0002230152	S	1427	AGCATCCTTACTCTCACCTTTTATGAGATTGAGAGTGGACTTACATTTCC	16	+	76623039-76623088	16q23.1d	Homo sapiens C-type lectin domain family 3, member A (CLEC3A), mRNA.		The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10524194] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 10524194] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	MGC129558; CLECSF1; MGC129559	MGC129558; CLECSF1; MGC129559
Homo sapiens	RefSeq	NR_031700.1	ILMN_388619	MIR1252	NR_031700.1	NR_031700.1		100302136	269847493	NR_031700.1	MIR1252		ILMN_3308901	0002120309	S	8	GGAAATTGAATTCATTTAGAAAAGAGAATTCCAAATGAGCTTAATTTCCT					Homo sapiens microRNA 1252 (MIR1252), microRNA.					
Homo sapiens	RefSeq	XM_001726262.1	ILMN_336710	LOC100130887	XM_001726262.1	XM_001726262.1		100130887	169201342	XM_001726262.1	LOC100130887	XP_001726314.1	ILMN_3255029	0001090408	M	760	CGCTCAGAAGCGCTCCAGCCCCGTTCCATCTTTCCTAAAATCTCAAGTGG				10q26.13a	PREDICTED: Homo sapiens hypothetical protein LOC100130887 (LOC100130887), mRNA.					
Homo sapiens	RefSeq	XM_001721285.1	ILMN_334419	LOC100134644	XM_001721285.1	XM_001721285.1		100134644	169170447	XM_001721285.1	LOC100134644	XP_001721337.1	ILMN_3235254	0001090091	S	334	ATCAGAGATTCCGACCTTCCTGATTGGAGGGACCGGACTCTGTCGGCACC	7	-	73662574-73662623		PREDICTED: Homo sapiens hypothetical protein LOC100134644 (LOC100134644), mRNA.					
Homo sapiens	RefSeq	NM_181524.1	ILMN_30011	PIK3R1	NM_181524.1	NM_181524.1		5295	32455249	NM_181524.1	PIK3R1	NP_852665.1	ILMN_1691433	0004290450	I	216	GAGGTGCGGGGGCTTGGCCCACTTGGTGGAAGAACAGCTTTGGGGATTTT	5	+	67584467-67584516	5q13.1c	Homo sapiens phosphoinositide-3-kinase, regulatory subunit 1 (alpha) (PIK3R1), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9356464] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12167717] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11606067] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12660731] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10648629] [evidence EXP]; A heterodimeric protein complex that possesses 1-phosphatidylinositol-4-phosphate 3-kinase activity; comprises a catalytic Class IA phosphoinositide 3-kinase (PI3K) subunit of 110-120 kDa and an associated SH2 domain-containing regulatory subunit that is a member of a family of related proteins often called p85 proteins. Class I PI3Ks phosphorylate phosphatidylinositol [PI], phosphatidylinositol-4-phosphate [PI(4)P] and phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2], and are divided into subclasses A and B according to the type of adaptor subunit with which they associate. Through the interaction with the SH2-containing adaptor subunits, Class IA PI3K catalytic subunits are linked to tyrosine kinase signaling pathways [goid 5943] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 8276809] [evidence IPI]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence ISS]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [pmid 7541045] [evidence IPI]	Interacting selectively with the insulin receptor [goid 5158] [pmid 7537849] [evidence IPI]; Interacting selectively with the insulin receptor [goid 5158] [pmid 8276809] [evidence IPI]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [pmid 7541045] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [evidence NAS]; Interacting selectively with any protein phosphatase [goid 19903] [pmid 14699157] [evidence IPI]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence ISS]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 10572067] [evidence IDA]; Interacting selectively with insulin, a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 43559] [pmid 8440175] [evidence IDA]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [evidence ISS]	p85; p85-ALPHA; GRB1	p85; p85-ALPHA; GRB1
Homo sapiens	RefSeq	XM_941263.1	ILMN_35896	LOC651974	XM_941263.1	XM_941263.1		651974	89062293	XM_941263.1	LOC651974	XP_946356.1	ILMN_1775525	0006660438	S	624	CAGCTGCTGGTTCCCTGGACCTACCTCCAGCTCTTCTTTCTGCTCCTGTT					PREDICTED: Homo sapiens similar to SHC transforming protein 2 (SH2 domain protein C2) (Src homology 2 domain containing transforming protein C2) (Protein Sck) (LOC651974), mRNA.					
Homo sapiens	RefSeq	NM_015088.1	ILMN_18527	TNRC6B	NM_015088.2	NM_015088.2		23112	148491079	NM_015088.2	TNRC6B	NP_055903.2	ILMN_1725739	0006110692	I	2796	CACAGCCTGCAACACCTAAGGATGAGGAACCCAGTGGTTGGGAAGAGCCA	22	+	38992765-38992814	22q13.1e	Homo sapiens trinucleotide repeat containing 6B (TNRC6B), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KIAA1093	KIAA1093
Homo sapiens	RefSeq	NM_001024843.1	ILMN_18527	TNRC6B	NM_015088.2	NM_015088.2		23112	148491079	NM_015088.2	TNRC6B	NP_055903.2	ILMN_1726786	0002760768	A	17406	CTAGGCACTTTAGAGGTGCACTTGCATGGCAGGCTGGGCCCCCTTTTCTA	22	+	39061214-39061263	22q13.1e	Homo sapiens trinucleotide repeat containing 6B (TNRC6B), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	KIAA1093	KIAA1093
Homo sapiens	RefSeq	NM_182539.1	ILMN_165982	TCTE1	NM_182539.2	NM_182539.2		202500	141801959	NM_182539.2	TCTE1	NP_872345.1	ILMN_1667720	0000780333	S	1361	GGTGCTCGCCATCAACACCACACTCACCAGCATCAACCTGTCCTGCAACC	6	-	44357835-44357884	6p21.1b	Homo sapiens t-complex-associated-testis-expressed 1 (TCTE1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	D6S46; MGC33600	
Homo sapiens	Unigene	Hs.543683	ILMN_107236	HS.543683	Hs.543683		Hs.543683		4395044	AI494041			ILMN_1843478	0004250091	S	156	TGCACGACATGGAACTCGAACCCACAAAAGGCACATGGAGCCCACTACAG	4	-	22439301-22439350		qz55a12.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2030782 3, mRNA sequence					
Homo sapiens	RefSeq	XM_932001.1	ILMN_43704	LOC644111	XM_932001.1	XM_932001.1		644111	89059053	XM_932001.1	LOC644111	XP_937094.1	ILMN_1759785	0002450091	S	215	CTAGACTCTCGCTGTGCGTGTTCGGCCCCGAGGGCAGGGGGAGACGGCCA	22	-	48965674-48965723	22q13.33b	PREDICTED: Homo sapiens hypothetical LOC644111 (LOC644111), mRNA.					
Homo sapiens	RefSeq	NM_001077244.1	ILMN_166569	GRIA4	NM_001077244.1	NM_001077244.1		2893	116284389	NM_001077244.1	GRIA4	NP_001070712.1	ILMN_2322100	0004040497	A	1478	CATGGAGAGGACACTCAAACAGGTTCGAATTCAAGGGCTGACAGGGAATG	11	+	105279896-105279917:105281133-105281160	11q22.3b	Homo sapiens glutamate receptor, ionotrophic, AMPA 4 (GRIA4), transcript variant 3, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8589990] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 8589990] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]	GLUR4C; GLUR4; GLURD	GLUR4C; GLUR4; GLURD
Homo sapiens	RefSeq	NM_005508.4	ILMN_10745	CCR4	NM_005508.4	NM_005508.4		1233	48762930	NM_005508.4	CCR4	NP_005499.1	ILMN_2086143	0007570154	S	1569	CCTGAACTGATGGGTTTCTCCAGAGGGAATTGCAGAGTACTGGCTGATGG	3	+	32971319-32971368	3p22.3c	Homo sapiens chemokine (C-C motif) receptor 4 (CCR4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7642634] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7642634] [evidence TAS]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it [goid 2507] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 7642634] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 7642634] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7642634] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 7642634] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	CMKBR4; ChemR13; CD194; K5-5; CKR4; HGCN:14099; MGC88293; CC-CKR-4	CMKBR4; ChemR13; CD194; K5-5; CKR4; HGCN:14099; MGC88293; CC-CKR-4
Homo sapiens	RefSeq	NM_178862.1	ILMN_6717	STT3B	NM_178862.1	NM_178862.1		201595	30578409	NM_178862.1	STT3B	NP_849193.1	ILMN_2194448	0001030674	S	2080	GACTATTTTACCCCACAGGGAGAATTCCGTGTAGACAAAGCAGGATCCCC	3	+	31638331-31638355:31638593-31638617	3p23b	Homo sapiens STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) (STT3B), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	STT3-B; SIMP; FLJ90106	STT3-B; SIMP; FLJ90106
Homo sapiens	RefSeq	NM_152649.1	ILMN_164083	MLKL	XM_001126647.1	XM_001126647.1		197259	113426507	XM_001126647.1	MLKL	XP_001126647.1	ILMN_1737498	0005810022	A	1675	CAGCCCGAGGCCTATACCGGCTACACCATTCAGAAGCACCTGAACTCCAC				16q22.3c	PREDICTED: Homo sapiens mixed lineage kinase domain-like (MLKL), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		FLJ34389
Homo sapiens	RefSeq	XM_936963.1	ILMN_164083	MLKL	XM_001126647.1	XM_001126647.1		197259	113426507	XM_001126647.1	MLKL	XP_001126647.1	ILMN_1668928	0001450414	I	1781	CTATAAGATGCGCTATTCCACCTTTCATCCCTGGTATCCCATACGGCGCT				16q22.3c	PREDICTED: Homo sapiens mixed lineage kinase domain-like (MLKL), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	XM_936963.1	ILMN_164083	MLKL	XM_001126647.1	XM_001126647.1		197259	113426507	XM_001126647.1	MLKL	XP_001126647.1	ILMN_1715863	0002710328	A	1580	TGTCATGGAGTACTGTGAACTCGGGACCCTGAGGGAGCTGTTGGATAGGG				16q22.3c	PREDICTED: Homo sapiens mixed lineage kinase domain-like (MLKL), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_178565.3	ILMN_3373	RSPO2	NM_178565.3	NM_178565.3		340419	40255217	NM_178565.3	RSPO2	NP_848660.2	ILMN_1695108	0005810563	S	2275	GATGGAGAGGAACACTATGGAAACTTCCCAGGTGACTTTCAGAGCAGTTG	8	-	108981197-108981246	8q23.1c	Homo sapiens R-spondin 2 homolog (Xenopus laevis) (RSPO2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	MGC35555; MGC43342	MGC35555; MGC43342
Homo sapiens	RefSeq	NM_178565.3	ILMN_3373	RSPO2	NM_178565.3	NM_178565.3		340419	40255217	NM_178565.3	RSPO2	NP_848660.2	ILMN_2081645	0006420341	S	2689	TTTCCCATTTACTAAGTGGGGAGGGGGTCTCCTTATATAGTGCTTCATCG	8	-	108980783-108980832	8q23.1c	Homo sapiens R-spondin 2 homolog (Xenopus laevis) (RSPO2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	MGC35555; MGC43342	MGC35555; MGC43342
Homo sapiens	RefSeq	NM_006297.1	ILMN_26577	XRCC1	NM_006297.1	NM_006297.1		7515	5454171	NM_006297.1	XRCC1	NP_006288.1	ILMN_1751743	0004590139	S	1877	ATCCCAGCTTTGAGGAGGCCCTGATGGACAACCCCTCCCTGGCATTCGTT	19	-	48739464-48739497:48739604-48739619	19q13.31a	Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 1 (XRCC1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8978692] [evidence EXP]	The repair of single strand breaks in DNA. Repair of such breaks is mediated by the same enzyme systems as are used in base excision repair [goid 12] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15044383] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14755728] [evidence IPI]	RCC	RCC
Homo sapiens	RefSeq	XM_940299.1	ILMN_39605	LOC651175	XM_940299.1	XM_940299.1		651175	88958115	XM_940299.1	LOC651175	XP_945392.1	ILMN_1699769	0004210053	S	567	ACAGGGCTTTACGAAGTCACCCCCACCACTTAGGCCGAGCCCCAAAAAAC					PREDICTED: Homo sapiens hypothetical protein LOC651175 (LOC651175), mRNA.					
Homo sapiens	RefSeq	NR_003058.1	ILMN_182210	SNORD70	NR_003058.1	NR_003058.1		692110	94967026	NR_003058.1	SNORD70		ILMN_3237685	0006590202	S	3	CGTTGTTGTCAATGATGTATTCTTCTTGGAACTGAATCTAAGTGATCTGA	2	+	202849401-202849450	2q33.1g	Homo sapiens small nucleolar RNA, C/D box 70 (SNORD70), small nucleolar RNA.				HBII-234	HBII-234
Homo sapiens	RefSeq	XM_001127097.1	ILMN_161907	LOC728290	XM_001127097.1	XM_001127097.1		728290	113414559	XM_001127097.1	LOC728290	XP_001127097.1	ILMN_3302625	0007040598	M	164	TCTGCAGGACGACAAAGGTTAAAGATGTAGACCCGGAGCTAGAAGCCAGC	3	+	81226981-81227030	3p12.3a	PREDICTED: Homo sapiens hypothetical LOC728290 (LOC728290), mRNA.					
Homo sapiens	RefSeq	XR_039018.1	ILMN_351016	LOC100132673	XR_039018.1	XR_039018.1		100132673	169168643	XR_039018.1	LOC100132673		ILMN_3294222	0004150615	M	544	GCATCGTCTCAGCCCGTGCCCAAGAAGCTGCTCATGATGGCTGGTATTGA				6p21.1d	PREDICTED: Homo sapiens misc_RNA (LOC100132673), miscRNA.					
Homo sapiens	RefSeq	NM_003063.1	ILMN_22283	SLN	NM_003063.2	NM_003063.2		6588	124376992	NM_003063.2	SLN	NP_003054.1	ILMN_1778595	0003610402	S	580	CAAGCCCCTGATCTGTCTCACCACACATCCCTTCAACCCACACGGTCTGC	11	-	107578201-107578250	11q22.3c	Homo sapiens sarcolipin (SLN), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9367679] [evidence TAS]; The lipid bilayer surrounding the sarcoplasmic reticulum [goid 33017] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9367679] [evidence TAS]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Modulates the activity of an enzyme [goid 30234] [evidence IEA]	MGC12301; MGC125854; MGC125855	MGC12301
Homo sapiens	RefSeq	NM_001004458.1	ILMN_169596	OR1S1	NM_001004458.1	NM_001004458.1		219959	52317173	NM_001004458.1	OR1S1	NP_001004458.1	ILMN_2139523	0001740048	S	672	TACACTCAGCTTCTTTTCCTATGTCTGCATCATCAGAGCTGTCCTGAGAG	11	+	57739464-57739513	11q12.1b	Homo sapiens olfactory receptor, family 1, subfamily S, member 1 (OR1S1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-232; OST034	OR11-232; OST034
Homo sapiens	RefSeq	NM_182703.2	ILMN_6117	ANKDD1A	NM_182703.3	NM_182703.3		348094	96975022	NM_182703.3	ANKDD1A	NP_874362.3	ILMN_1813139	0005890564	S	2807	TCGGGGAAACTGTGTGTGCTGAAGAGTACGTGGGAGCTCTCTGTGCTATC	15	+	63037789-63037838	15q22.31b	Homo sapiens ankyrin repeat and death domain containing 1A (ANKDD1A), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC120306; FLJ25870; MGC120307; MGC120305	MGC120306; FLJ25870; MGC120307
Homo sapiens	RefSeq	NR_024273.1	ILMN_370036	SEC13	NR_024273.1	NR_024273.1		6396	210032741	NR_024273.1	SEC13		ILMN_3297880	0000650338	M	1172	CCCTTCCTGGGCCAACTAACCAGACAACTGGGAAGAGCCCCCAACTCCAA	3	-	10342848-10342897	3p25.3b	Homo sapiens SEC13 homolog (S. cerevisiae) (SEC13), transcript variant 4, non-coding RNA.		The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 7987303] [evidence NAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 11252894] [evidence EXP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_139076.1	ILMN_12182	FLJ13614	NM_139076.1	NM_139076.1		84142	20589960	NM_139076.1	FLJ13614	NP_620775.1	ILMN_1748290	0002760609	S	738	GAGGAGCACAGATTCAGGCAGCAAGAGAGAAGAACATCCAAAAAGACCCT	4	-	84603052-84603079:84603671-84603692	4q21.23a	Homo sapiens hypothetical protein FLJ13614 (FLJ13614), mRNA.				FLJ12642; FLJ11520	FLJ12642; FLJ11520
Homo sapiens	RefSeq	XM_001722309.1	ILMN_347623	LOC100131480	XM_001722309.1	XM_001722309.1		100131480	169164390	XM_001722309.1	LOC100131480	XP_001722361.1	ILMN_3213761	0004390296	A	340	AGAGTTGGGCCAGGGCAGAGCCACTCCTGAAAGAGGACAGAGGGGGGCTT				2q31.2a	PREDICTED: Homo sapiens similar to hCG2045844 (LOC100131480), mRNA.					
Homo sapiens	RefSeq	XR_039647.1	ILMN_344025	LOC730375	XR_039647.1	XR_039647.1		730375	169170238	XR_039647.1	LOC730375		ILMN_3242833	0003170039	S	53	TCTTGCTCTGTCACCAGGCTGGACTGTAGTGGCATAATCATGCCTCACTG	7	+	45885309-45885358		PREDICTED: Homo sapiens misc_RNA (LOC730375), miscRNA.					
Homo sapiens	RefSeq	XM_945263.1	ILMN_41436	LOC649527	XM_945267.2	XM_945267.2		649527	113416196	XM_945267.2	LOC649527	XP_950360.1	ILMN_1692762	0006220259	A	331	TAGCTACAAAACTGCACTTCCTAGAGACATGTTGAGAGAGGTTCAAGGCT					PREDICTED: Homo sapiens hypothetical LOC649527, transcript variant 3 (LOC649527), mRNA.					
Homo sapiens	RefSeq	XM_945267.1	ILMN_41436	LOC649527	XM_945267.2	XM_945267.2		649527	113416196	XM_945267.2	LOC649527	XP_950360.1	ILMN_1678129	0007320255	I	11	AGAAAATTCTGCAAAGTTCACATTGGTTGAAGTCCAGTGGTAAATAATGT					PREDICTED: Homo sapiens hypothetical LOC649527, transcript variant 3 (LOC649527), mRNA.					
Homo sapiens	RefSeq	XM_051862.7	ILMN_307138	FAM108C1	NM_021214.1	NM_021214.1		58489	151301174	NM_021214.1	FAM108C1	NP_067037.1	ILMN_1788416	0004150519	A	2300	GTACTGTTGCTTGGATGCGGCACAGTGGTTGGTAATGGAATAAAGGATGC	15	+	78834957-78835006	15q25.1b	Homo sapiens family with sequence similarity 108, member C1 (FAM108C1), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC131546; FLJ34461	
Homo sapiens	RefSeq	NM_021727.3	ILMN_18681	FADS3	NM_021727.3	NM_021727.3		3995	34304362	NM_021727.3	FADS3	NP_068373.1	ILMN_2098643	0001230132	S	1483	CATCAGTGAAGGCAACACCCAGGCGGGCAGAGAAGGGCTCAGGGCACCAG	11	-	61641244-61641285:61641286-61641293	11q12.2b-q12.3a	Homo sapiens fatty acid desaturase 3 (FADS3), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10860662] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of an unsaturated fatty acid, any fatty acid containing one or more double bonds between carbon atoms [goid 6636] [pmid 10860662] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced to two molecules of water [goid 16717] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	CYB5RP; LLCDL3	CYB5RP; LLCDL3
Homo sapiens	RefSeq	NM_170696.1	ILMN_17630	ALDH1A2	NM_170696.1	NM_170696.1		8854	25777725	NM_170696.1	ALDH1A2	NP_733797.1	ILMN_2383707	0005700102	A	2540	GTGCCCTGTATCTATTGGCAGTGACCTTGGAAAATCTGGCCAAGCCTAGG	15	-	58246306-58246355	15q22.1a	Homo sapiens aldehyde dehydrogenase 1 family, member A2 (ALDH1A2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to a single longitudinal plane. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 9855] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IEA]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IEA]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IEA]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal [goid 1758] [evidence IEA]; Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [pmid 8663198] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8797830] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC26444; RALDH(II); RALDH2; RALDH2-T	MGC26444; RALDH(II); RALDH2; RALDH2-T
Homo sapiens	RefSeq	XM_936744.1	ILMN_137763	LOC647447	XM_936744.1	XM_936744.1		647447	88988748	XM_936744.1	LOC647447	XP_941837.1	ILMN_1670297	0004640524	I	335	ACAGAGATTTCCACTTGAGTCATGACTTATGCCATCTTCCCCTCAAGTGC					PREDICTED: Homo sapiens hypothetical protein LOC647446, transcript variant 1 (LOC647447), mRNA.					
Homo sapiens	RefSeq	XM_936744.1	ILMN_137763	LOC647447	XM_936744.1	XM_936744.1		647447	88988748	XM_936744.1	LOC647447	XP_941837.1	ILMN_1681930	0002490020	A	1252	ATAACGTGCTTGAACATCTCGTCTTCCATAAGACACAGCTTCAAAAGAAA					PREDICTED: Homo sapiens hypothetical protein LOC647446, transcript variant 1 (LOC647447), mRNA.					
Homo sapiens	RefSeq	NM_002833.2	ILMN_178257	PTPN9	XM_001128975.1	XM_001128975.1		5780	113425734	XM_001128975.1	PTPN9	XP_001128975.1	ILMN_1694923	0003930279	A	3248	ACCCAACCTGTCCCTGCCTGCTCCCAGCCCACTCATCCTTATGTGCTAGG				15q24.2a	PREDICTED: Homo sapiens protein tyrosine phosphatase, non-receptor type 9 (PTPN9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1557404] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	 [goid 4726] [pmid 1557404] [evidence TAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12907755] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		MEG2
Homo sapiens	RefSeq	NM_021246.2	ILMN_26208	LY6G6D	NM_021246.2	NM_021246.2		58530	51243048	NM_021246.2	LY6G6D	NP_067069.2	ILMN_1696295	0004490544	S	351	TGCAGCAGCTACCGCCCTGACCTGTCTCTTGCCAGGACTGTGGAGCGGAT	6	+	31685530-31685579	6p21.33a	Homo sapiens lymphocyte antigen 6 complex, locus G6D (LY6G6D), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			LY6-D; MEGT1; C6orf23; G6D; MGC150334; NG25	LY6-D; MEGT1; C6orf23; G6D; MGC150334; NG25
Homo sapiens	RefSeq	NM_152563.1	ILMN_10822	FAM86C	NM_152563.2	NM_152563.2		55199	153251793	NM_152563.2	FAM86C	NP_689776.1	ILMN_1753482	0000670446	A	1714	CAGCGCTCCGCCTCCAACTTGACATCATGCTTTCTGGAAACTTCCCCGTG	11	+	71189633-71189682	11q13.4a	Homo sapiens family with sequence similarity 86, member C (FAM86C), transcript variant 2, mRNA.				MGC45068; FLJ10661; FLJ27199	MGC45068; FLJ10661; FLJ27199
Homo sapiens	RefSeq	NM_177552.2	ILMN_28760	SULT1A3	NM_003166.3	NM_003166.3		6818	62868218	NM_003166.3	SULT1A3	NP_003157.1	ILMN_1707804	0005560603	A	613	ATCAAGTCACACCTGCCCCTGGCTCTGCTCCCTCAGACTCTGTTGGATCA	16	+	30120056-30120105	16p11.2d	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 (SULT1A3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8363592] [evidence TAS]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [pmid 8117269] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC117469; HAST3; STM; TL-PST; SULT1A4; HAST; ST1A5; M-PST	MGC117469; HAST3; STM; TL-PST; SULT1A4; HAST; ST1A5; M-PST
Homo sapiens	RefSeq	XM_942936.1	ILMN_28760	SULT1A3	NM_003166.3	NM_003166.3		6818	62868218	NM_003166.3	SULT1A3	NP_003157.1	ILMN_1815283	0003180259	A	688	CGAAACCCAAAGGACGTGGCGGTCTCCTACTACCATTTCCACCGTATGGA	16	+	30121527-30121576	16p11.2d	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 (SULT1A3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8363592] [evidence TAS]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [pmid 8117269] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC117469; HAST3; STM; TL-PST; SULT1A4; HAST; ST1A5; M-PST	
Homo sapiens	RefSeq	NM_003166.3	ILMN_28760	SULT1A3	NM_003166.3	NM_003166.3		6818	62868218	NM_003166.3	SULT1A3	NP_003157.1	ILMN_2262177	0003120142	I	6	TTTGATGACGCGGAGCCTGAGCCAGACCAGGGGGATCCAGGGGCCTGCTG	16	+	30113975-30114024	16p11.2d	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 (SULT1A3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8363592] [evidence TAS]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [pmid 8117269] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC117469; HAST3; STM; TL-PST; SULT1A4; HAST; ST1A5; M-PST	MGC117469; HAST3; STM; TL-PST; SULT1A4; HAST; ST1A5; M-PST
Homo sapiens	RefSeq	NM_001017389.1	ILMN_28760	SULT1A3	NM_003166.3	NM_003166.3		6818	62868218	NM_003166.3	SULT1A3	NP_003157.1	ILMN_1670517	0005080619	I	61	TGTGCGCCCAGACCATCCAGGATGAAGAGGGGCCCTTGTGTTGCCCCCAC	16	+	30114030-30114049:30115796-30115825	16p11.2d	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 (SULT1A3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8363592] [evidence TAS]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [pmid 8117269] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC117469; HAST3; STM; TL-PST; SULT1A4; HAST; ST1A5; M-PST	
Homo sapiens	Unigene	Hs.158888	ILMN_79539	HS.158888	Hs.158888		Hs.158888		19591473	BM973882			ILMN_1851972	0001570097	S	476	CGTGACAGGGAAGCAGAACAGGAGGCCAAGACCAGCCACACACTGCGAGA	17	+	76928035-76928067		UI-CF-EC1-ach-p-22-0-UI.s1 UI-CF-EC1 Homo sapiens cDNA clone UI-CF-EC1-ach-p-22-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.412918	ILMN_90317	HS.412918	Hs.412918		Hs.412918		16552699	AK057112			ILMN_1873540	0001770288	S	2638	ctcctcccttgtccaggtgtgtgctcactattgctccaaatgtaaggggg	Y	-	19662988-19663037		Homo sapiens cDNA FLJ32550 fis, clone SPLEN1000056					
Homo sapiens	RefSeq	NM_020843.1	ILMN_22657	SCAPER	NM_020843.1	NM_020843.1		49855	16507197	NM_020843.1	SCAPER	NP_065894.1	ILMN_1811178	0004250646	S	4150	CCAAGACTATCTTGAGCTGGCTAACAGATTTCCTCAGCAGGCCTGGGAAG	15	-	74428066-74428115	15q24.3a	Homo sapiens S phase cyclin A-associated protein in the ER (SCAPER), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1454; Zfp291; FLJ31533; ZNF291; MSTP063; FLJ31953	KIAA1454; Zfp291; FLJ31533; ZNF291; MSTP063; FLJ31953
Homo sapiens	RefSeq	XM_172874.5	ILMN_165466	LOC253724	XR_015316.1	XR_015316.1		253724	113423470	XR_015316.1	LOC253724		ILMN_1760651	0007650608	I	937	GTGGCAGCAGATTCCAGTTTAGATTCTGTCCCCAGAATAAATCCTACTCC	12	-	102824245-102824260:102829226-102829259	12q23.3a	PREDICTED: Homo sapiens misc_RNA (LOC253724), miscRNA.					
Homo sapiens	RefSeq	NM_003862.1	ILMN_8856	FGF18	NM_003862.1	NM_003862.1		8817	4503694	NM_003862.1	FGF18	NP_003853.1	ILMN_1797030	0004540739	I	1276	GTGTTTAAAAGAAGACAAAAACTGAACCAAAACTCTTGGGGGGAGGGGTG	5	+	170816529-170816578	5q35.1d	Homo sapiens fibroblast growth factor 18 (FGF18), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1697263] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9742123] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11256614] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed [goid 1957] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9742123] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9742123] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9742123] [evidence TAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9742123] [evidence TAS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 9742123] [evidence TAS]	ZFGF5; FGF-18	ZFGF5; FGF-18
Homo sapiens	RefSeq	NM_033649.1	ILMN_8856	FGF18	NM_003862.1	NM_003862.1		8817	4503694	NM_003862.1	FGF18	NP_003853.1	ILMN_1693483	0005810528	A	1183	AGGTCGCCCTGGCCACACTCACACTCCCAGAAAACTGCATCAGAGGAATA	5	+	170816436-170816485	5q35.1d	Homo sapiens fibroblast growth factor 18 (FGF18), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1697263] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9742123] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11256614] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of bone in which osteoblasts secrete a collage-proteoglycan matrix that binds calcium salts and becomes calcified. Intramembranous ossification is the way flat bones and the shell of a turtle are formed [goid 1957] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA]; The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate [goid 2063] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9742123] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9742123] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9742123] [evidence TAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9742123] [evidence TAS]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 9742123] [evidence TAS]	ZFGF5; FGF-18	ZFGF5; FGF-18
Homo sapiens	RefSeq	XM_936467.1	ILMN_37437	BEXL1	XM_936467.2	XM_936467.2		56271	113430534	XM_936467.2	BEXL1	XP_941560.1	ILMN_1804798	0004490180	A	1052	AAATGTAGGACCTATCGTCCAGACTCACAGAGTGGGGCTCCAGAATCTCC				Xq22.1e	PREDICTED: Homo sapiens brain expressed X-linked-like 1 (BEXL1), mRNA.					
Homo sapiens	RefSeq	NM_012253.2	ILMN_165044	TKTL1	NM_012253.2	NM_012253.2		8277	58082082	NM_012253.2	TKTL1	NP_036385.2	ILMN_1674009	0001510646	S	2417	GGCAGCAGCGAAAGCTTGTTAGGATGTCCTGTGCTGCTTGTGATGAGAGC	X	+	153211796-153211845	Xq28g	Homo sapiens transketolase-like 1 (TKTL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glucose, the aldohexose gluco-hexose [goid 6007] [pmid 8838793] [evidence TAS]; The chemical reactions and pathways involving thiamin (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 6772] [pmid 8838793] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [pmid 8838793] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TKT2; TKR	TKT2; TKR
Homo sapiens	RefSeq	NM_001010872.1	ILMN_1041	FAM83B	NM_001010872.1	NM_001010872.1		222584	61676088	NM_001010872.1	FAM83B	NP_001010872.1	ILMN_1782863	0000050196	S	2862	CCAAGGCCAACGTCCAGTGAGCTTCTACGATCTCATTCAACTGATCGGCG	6	+	54806515-54806564	6p12.1c-p12.1b	Homo sapiens family with sequence similarity 83, member B (FAM83B), mRNA.				FLJ30642; MGC126677; C6orf143; MGC138480	FLJ30642; MGC126677; C6orf143; MGC138480
Homo sapiens	RefSeq	NM_014409.3	ILMN_6872	TAF5L	NM_014409.3	NM_014409.3		27097	69122714	NM_014409.3	TAF5L	NP_055224.1	ILMN_2252813	0002320292	I	2519	GAGGGCACCTTCTCTGCTTTTAATCTTTCAGGTTTGACTCCTGGCACTGG	1	-	229729411-229729460	1q42.13e	Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa (TAF5L), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9674425] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9674425] [evidence TAS]	PAF65B	PAF65B
Homo sapiens	RefSeq	XM_001715558.1	ILMN_337347	LOC441018	XM_001715558.1	XM_001715558.1		441018	169166782	XM_001715558.1	LOC441018	XP_001715610.1	ILMN_3278438	0006660082	M	1	ATGCTACCTCAATATTGGGTGGATGAAGAAGACTCTGGGCAGCGAGGCAT				4q13.2c	PREDICTED: Homo sapiens hypothetical LOC441018 (LOC441018), mRNA.					
Homo sapiens	RefSeq	XM_001715558.1	ILMN_337347	LOC441018	XM_001715558.1	XM_001715558.1		441018	169166782	XM_001715558.1	LOC441018	XP_001715610.1	ILMN_3201965	0005560356	A	181	GTCGTGGCAGTCTTGCTTAAGTCTATGGTCAGTAACATCACAGAAGAAAG				4q13.2c	PREDICTED: Homo sapiens hypothetical LOC441018 (LOC441018), mRNA.					
Homo sapiens	RefSeq	XM_926179.1	ILMN_36618	LOC642744	XM_926179.1	XM_926179.1		642744	89037240	XM_926179.1	LOC642744	XP_931272.1	ILMN_1684818	0004390270	S	309	CGTGTTCTAAATGCATGCACCTGAGTAAAAGGATCTGGGCTGCAGTCTAG	14	+	18973409-18973458		PREDICTED: Homo sapiens similar to Ribosome biogenesis protein BMS1 homolog (LOC642744), mRNA.					
Homo sapiens	RefSeq	NM_014751.2	ILMN_166688	MTSS1	NM_014751.2	NM_014751.2		9788	30023852	NM_014751.2	MTSS1	NP_055566.2	ILMN_2073289	0003170300	S	4780	TTGTGCTTTAGTTGCTAGTTTGTACTGAGAGTTGACCTCTCCCTGTGCAG	8	-	125632315-125632364	8q24.13d	Homo sapiens metastasis suppressor 1 (MTSS1), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 12570871] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12570871] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 12570871] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [pmid 12570871] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 12570871] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 12570871] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 12570871] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 12082544] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]	Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [pmid 12570871] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 12570871] [evidence IPI]	MIM; KIAA0429; MIMA; MIMB; FLJ44694	MIM; KIAA0429; MIMA; MIMB; FLJ44694
Homo sapiens	RefSeq	NM_025137.2	ILMN_165427	SPG11	NM_025137.3	NM_025137.3		80208	93204887	NM_025137.3	SPG11	NP_079413.3	ILMN_1665049	0002100524	S	7456	GAACAATCCCGGTACTGTACCATATCAGTCCTTTGTGGGTAGTAGGTAGC	15	-	44855176-44855225	15q15.3c-q21.1a	Homo sapiens spastic paraplegia 11 (autosomal recessive) (SPG11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA1840; DKFZp762B1512; FLJ21439	DKFZp762B1512; FLJ21439
Homo sapiens	RefSeq	NR_030357.1	ILMN_388122	MIR627	NR_030357.1	NR_030357.1		693212	262206127	NR_030357.1	MIR627		ILMN_3310161	0001470274	S	11	GGTAGTGAGTCTCTAAGAAAAGAGGAGGTGGTTGTTTTCCTCCTCTTTTC				15q15.1d	Homo sapiens microRNA 627 (MIR627), microRNA.					
Homo sapiens	RefSeq	XM_001714421.1	ILMN_334609	LOC728991	XM_001714421.1	XM_001714421.1		728991	169211551	XM_001714421.1	LOC728991	XP_001714473.1	ILMN_3220802	0004070646	A	67	TTTTTTGACACAGGGTCTTGCTATGTCACCTAGGCTGAAGTGCAGTGGTA				17q25.3e	PREDICTED: Homo sapiens hypothetical LOC728991 (LOC728991), mRNA.					
Homo sapiens	RefSeq	NM_004659.1	ILMN_27542	MMP23A	NM_004659.1	NM_004659.1		8511	4758729	NM_004659.1	MMP23A	NP_004650.1	ILMN_1790052	0006480110	S	968	CCTTCCGTTGCGGCCAGAAGATCCTCCACAAGAAAGGGAAAGTGTACTGG	1	+	1559525-1559570:1559690-1559693	1p36.33a	Homo sapiens matrix metallopeptidase 23A (MMP23A), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 9740677] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 9988691] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The production by an organism of new individuals that contain some portion of their genetic material inherited from that organism [goid 3] [pmid 9988691] [evidence IEP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9988691] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 9988691] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 9740677] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9988691] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MIFR; MMP21; MIFR-1	MIFR-1; MIFR; MMP21
Homo sapiens	RefSeq	XM_945082.1	ILMN_45092	LOC645755	XM_933116.1	XM_933116.1		645755	89056878	XM_933116.1	LOC645755	XP_938209.1	ILMN_1689101	0004860300	S	61	CTAGGACCTGTCACCTGGGCCTCCCCGGGAGAGCTGACACCGCGGCCTCT	19	-	52805552-52805601	19q13.32c	PREDICTED: Homo sapiens hypothetical LOC645755 (LOC645755), mRNA.					
Homo sapiens	RefSeq	NM_003263.3	ILMN_169443	TLR1	NM_003263.3	NM_003263.3		7096	41350336	NM_003263.3	TLR1	NP_003254.2	ILMN_1731048	0006520451	S	2736	GTGAGTGTATGATGTAGGTAAAAATATATACCTTCGGGTCGCAGTTCACC	4	-	38797941-38797990	4p14c	Homo sapiens toll-like receptor 1 (TLR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9435236] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9435236] [evidence TAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10426995] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9435236] [evidence TAS]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [pmid 11607792] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [pmid 12077222] [evidence ISS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [pmid 12077222] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 11081518] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0012; DKFZp547I0610; TIL; CD281; MGC126312; MGC104956; rsc786; DKFZp564I0682; MGC126311	KIAA0012; DKFZp547I0610; TIL; CD281; MGC126312; MGC104956; rsc786; DKFZp564I0682; MGC126311
Homo sapiens	RefSeq	NM_005093.3	ILMN_42009	CBFA2T2	NM_005093.3	NM_005093.3		9139	89353292	NM_005093.3	CBFA2T2	NP_005084.1	ILMN_2331062	0002940762	A	7337	CCCCATCCCTACCTTGGAGTCGGCAGAGAAGCAGCAATAAGCATTAGGCG	20	+	31701098-31701147	20q11.22a	Homo sapiens core-binding factor, runt domain, alpha subunit 2; translocated to, 2 (CBFA2T2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16966434] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZMYND3; DKFZp313F2116; MTGR1; EHT	MTGR1; EHT; ZMYND3; DKFZp313F2116
Homo sapiens	RefSeq	NM_005093.3	ILMN_42009	CBFA2T2	NM_005093.3	NM_005093.3		9139	89353292	NM_005093.3	CBFA2T2	NP_005084.1	ILMN_2251895	0003120619	I	347	AACTCCTGGGCTAAAGCGATCTTCCCATGTTGGCTGCCCAAAGTGCTGGG	20	+	31625477-31625526	20q11.22a	Homo sapiens core-binding factor, runt domain, alpha subunit 2; translocated to, 2 (CBFA2T2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16966434] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZMYND3; DKFZp313F2116; MTGR1; EHT	MTGR1; EHT; ZMYND3; DKFZp313F2116
Homo sapiens	RefSeq	XR_039461.1	ILMN_338668	LOC100131323	XR_039461.1	XR_039461.1		100131323	169203074	XR_039461.1	LOC100131323		ILMN_3280126	0007100400	M	144	AATGATTTTGCCTTTTCACCCCCTAGCACTGCTGGGCCGGCAGGTCTCTG				11q23.3d	PREDICTED: Homo sapiens misc_RNA (LOC100131323), miscRNA.					
Homo sapiens	RefSeq	XR_039461.1	ILMN_338668	LOC100131323	XR_039461.1	XR_039461.1		100131323	169203074	XR_039461.1	LOC100131323		ILMN_3203625	0001740138	A	1036	GTCCCTTGCTCAGAAGAAACATCAGGTAGCTTAAAAGAAGGCAAGCTCCC				11q23.3d	PREDICTED: Homo sapiens misc_RNA (LOC100131323), miscRNA.					
Homo sapiens	RefSeq	NM_015497.2	ILMN_181695	TMEM87A	NM_015497.2	NM_015497.2		25963	31377764	NM_015497.2	TMEM87A	NP_056312.2	ILMN_1716816	0007150196	S	2663	GCGTGGAGGCCCTGGACTGCTGCTCGTTCTTTAGGATGGACTGTTCTGGT	15	-	40290188-40290237	15q15.1d	Homo sapiens transmembrane protein 87A (TMEM87A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP564G2022	DKFZP564G2022
Homo sapiens	RefSeq	XR_040804.1	ILMN_345883	LOC121838	XR_040804.1	XR_040804.1		121838	169206403	XR_040804.1	LOC121838		ILMN_3288204	0000990133	M	590	GAGGTCCTTTGCTCCTGTTCCCTGGAGGCATAAGTGGCTGGGGTAGAGAG				13q14.11e	PREDICTED: Homo sapiens misc_RNA (LOC121838), miscRNA.					
Homo sapiens	RefSeq	XM_001714340.1	ILMN_341794	LOC100134099	XM_001714340.1	XM_001714340.1		100134099	169206302	XM_001714340.1	LOC100134099	XP_001714392.1	ILMN_3241076	0004200687	S	73	CAGTTGAGCTTCACGAAGCCGATGGTCGGTGAGCGCGCGGTACCAGCCCT					PREDICTED: Homo sapiens hypothetical LOC100134099 (LOC100134099), mRNA.					
Homo sapiens	RefSeq	NM_198080.2	ILMN_23954	MSRB3	NM_198080.2	NM_198080.2		253827	72534836	NM_198080.2	MSRB3	NP_932346.1	ILMN_2332553	0003400458	A	3097	CTCAGCCATCAGCGTCCAGACCATCCTAGAAGTCTTTCCCAATCTCACAG	12	+	64145826-64145875	12q14.3a	Homo sapiens methionine sulfoxide reductase B3 (MSRB3), transcript variant 1, mRNA.				FLJ36866; DKFZp686C1178	FLJ36866; DKFZp686C1178
Homo sapiens	RefSeq	NM_198080.2	ILMN_23954	MSRB3	NM_198080.2	NM_198080.2		253827	72534836	NM_198080.2	MSRB3	NP_932346.1	ILMN_1676088	0004290088	A	3772	GGAAGTGCATGGGACTTTCCCTCTCTGCACTCCAGCTCTTACTGTACCAT	12	+	64146501-64146550	12q14.3a	Homo sapiens methionine sulfoxide reductase B3 (MSRB3), transcript variant 1, mRNA.				FLJ36866; DKFZp686C1178	FLJ36866; DKFZp686C1178
Homo sapiens	RefSeq	NM_001646.1	ILMN_9184	APOC4	NM_001646.1	NM_001646.1		346	4502160	NM_001646.1	APOC4	NP_001637.1	ILMN_1765605	0003440717	S	334	GGCCTGGTTCCTCGAATCCAAAGACAGCCTCTTGAAGAAGACCCACAGCC	19	+	45448472-45448521	19q13.32a	Homo sapiens apolipoprotein C-IV (APOC4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8530039] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [pmid 8530039] [evidence TAS]		
Homo sapiens	RefSeq	NM_001001.3	ILMN_3058	RPL36AL	NM_001001.3	NM_001001.3		6166	34335143	NM_001001.3	RPL36AL	NP_000992.1	ILMN_2189933	0005220161	S	92	AGCCCTGCTGCAAAGATGGTCAACGTACCTAAAACCCGAAGAACCTTCTG	14	-	50085787-50085822:50085823-50085836	14q22.1a	Homo sapiens ribosomal protein L36a-like (RPL36AL), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	RPL36A; MGC111574	RPL36A; MGC111574
Homo sapiens	RefSeq	NM_001001.3	ILMN_3058	RPL36AL	NM_001001.3	NM_001001.3		6166	34335143	NM_001001.3	RPL36AL	NP_000992.1	ILMN_2189936	0003170184	S	31	CGAGAGCTGCGAAGGGCCAGGTGTCGGGCGCTGTTTCTCGTTTTCATCAT	14	-	50085848-50085858:50087280-50087318	14q22.1a	Homo sapiens ribosomal protein L36a-like (RPL36AL), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	RPL36A; MGC111574	RPL36A; MGC111574
Homo sapiens	RefSeq	NM_014679.3	ILMN_27141	CEP57	NM_014679.3	NM_014679.3		9702	59710114	NM_014679.3	CEP57	NP_055494.2	ILMN_1791568	0007100519	S	2805	CTAGTACTTAGTTGCCACACTCATGCTTACATAGAAAGAGAGCCCAAGAA	11	+	95205149-95205198	11q21c	Homo sapiens centrosomal protein 57kDa (CEP57), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12954732] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10942595] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 12717444] [evidence IDA]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IEA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [pmid 12717444] [evidence ISS]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [pmid 12954732] [evidence ISS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 12717444] [evidence IPI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with fibroblast growth factor [goid 17134] [pmid 12717444] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12717444] [evidence IPI]	TSP57; KIAA0092; PIG8	KIAA0092; TSP57; PIG8
Homo sapiens	RefSeq	XM_001719204.1	ILMN_340711	LOC100128356	XM_001719204.1	XM_001719204.1		100128356	169191002	XM_001719204.1	LOC100128356	XP_001719256.1	ILMN_3259741	0002630608	M	209	TGTGGGCTCTGGGACCAGACCGGGAACAGAAAATGGACATTGGCAGAAAT	10	-	4472264-4472313	10p15.1d	PREDICTED: Homo sapiens similar to protein transactivated by hepatitis B virus E antigen (LOC100128356), mRNA.					
Homo sapiens	RefSeq	NM_018555.4	ILMN_167048	ZNF331	NM_001079907.1	NM_001079907.1		55422	120952913	NM_001079907.1	ZNF331	NP_001073376.1	ILMN_1711199	0000510767	S	3968	AGGCTGATTTCAGATGTCTCACCACAAAGAAGGAGGATAAGGGAGCGAGG	19	+	54083340-54083389	19q13.41b	Homo sapiens zinc finger protein 331 (ZNF331), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10502321] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF361; DKFZp686L0787; RITA; ZNF463	ZNF361; DKFZp686L0787; RITA; ZNF463
Homo sapiens	RefSeq	NM_002816.3	ILMN_175480	PSMD12	NM_002816.3	NM_002816.3		5718	109702908	NM_002816.3	PSMD12	NP_002807.1	ILMN_2368971	0007210373	A	1216	GGATGGCACAGCTTCTGGATCTATCTGTTGATGAGTCCGAAGCCTTTCTC	17	-	65337150-65337168:65338302-65338332	17q24.2b	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 (PSMD12), transcript variant 1, mRNA. XM_946055 XM_946058	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [pmid 9426256] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC75406; p55	MGC75406; p55
Homo sapiens	RefSeq	NM_181704.1	ILMN_10569	BAGE4	NM_181704.1	NM_181704.1		85317	32699146	NM_181704.1	BAGE4	NP_859055.1	ILMN_1697549	0000380139	S	343	GAGACAGCAGCTCAACAGGAACAATAGGAGGGTACCCGTGGAGGCCAAGT	21	-	10113112-10113141:10117244-10117263	21p11.1d	Homo sapiens B melanoma antigen family, member 4 (BAGE4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC119852; MGC119853; MLL3P; MGC119851	MGC119852; MGC119853; MLL3P; MGC119851
Homo sapiens	RefSeq	NM_181704.1	ILMN_10569	BAGE4	NM_181704.1	NM_181704.1		85317	32699146	NM_181704.1	BAGE4	NP_859055.1	ILMN_2138135	0002940440	S	1449	CCAACAACTTACATCTCAGTCACTCCAAAAAACTGGCATGGGTAAACCAG	21	-	10060646-10060695	21p11.1d	Homo sapiens B melanoma antigen family, member 4 (BAGE4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC119852; MGC119853; MLL3P; MGC119851	MGC119852; MGC119853; MLL3P; MGC119851
Homo sapiens	RefSeq	XR_041820.1	ILMN_341363	LOC151760	XR_041820.1	XR_041820.1		151760	169165949	XR_041820.1	LOC151760		ILMN_3283369	0005910008	M	707	CTCAGTGGTGGAATTACTTCCTACTTCCTTCCCATTAGGTTGAAGGTGGG				3q13.13d	PREDICTED: Homo sapiens misc_RNA (LOC151760), miscRNA.					
Homo sapiens	RefSeq	XR_039754.1	ILMN_348738	LOC729992	XR_039754.1	XR_039754.1		729992	169164076	XR_039754.1	LOC729992		ILMN_3227994	0002100577	A	144	TGTTCTGCACACCGAGGAAATGTGCTTCCTGAGGGAGTGGGTGGAGAGCC				2p25.1a	PREDICTED: Homo sapiens misc_RNA (LOC729992), miscRNA.					
Homo sapiens	RefSeq	NM_002415.1	ILMN_26688	MIF	NM_002415.1	NM_002415.1		4282	4505184	NM_002415.1	MIF	NP_002406.1	ILMN_1807074	0004490671	S	361	GCGCATCAGCCCGGACAGGGTCTACATCAACTATTACGACATGAACGCGG	22	+	22567114-22567131:22567227-22567258	22q11.23a	Homo sapiens macrophage migration inhibitory factor (glycosylation-inhibiting factor) (MIF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12782713] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways resulting in the formation of prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring [goid 1516] [pmid 12782713] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 12782713] [evidence IDA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 12782713] [evidence IDA]; Any process that modulates the frequency or rate of macrophage activation [goid 43030] [pmid 12782713] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 12782713] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 12782713] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12782713] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12681488] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: keto-phenylpyruvate = enol-phenylpyruvate [goid 50178] [evidence IEA]	GLIF; MMIF; GIF	GLIF; MMIF; GIF
Homo sapiens	RefSeq	XM_940287.1	ILMN_42815	LOC442710	XM_940287.1	XM_940287.1		442710	89026222	XM_940287.1	LOC442710	XP_945380.1	ILMN_1679779	0001240347	A	106	GTGGGAAGAGCTGATGGAAGATTTGGAAACACTGGGCTAGATCGTAACGC				7q21.2b	PREDICTED: Homo sapiens similar to EF-hand calcium binding domain 1 (LOC442710), mRNA.					
Homo sapiens	RefSeq	NM_015695.1	ILMN_8164	BRPF3	NM_015695.2	NM_015695.2		27154	148727367	NM_015695.2	BRPF3	NP_056510.2	ILMN_1658800	0004480280	S	5750	ATGCTCTTTTAGAACGGGAAACGGCTCAGATCCTGCTGTGGCACGGGGCC	6	+	36200294-36200343	6p21.31a	Homo sapiens bromodomain and PHD finger containing, 3 (BRPF3), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	XM_926710.1	ILMN_34255	LOC643381	XM_926710.1	XM_926710.1		643381	89034284	XM_926710.1	LOC643381	XP_931803.1	ILMN_1702042	0006290669	S	640	GCCCTGCTTGAGGCACCAGCCCTTAGCCTTCCGATAGGGAAGACATTCAG	11	-	97344221-97344270	11q22.1b	PREDICTED: Homo sapiens hypothetical protein LOC643381 (LOC643381), mRNA.					
Homo sapiens	RefSeq	NM_139161.2	ILMN_137133	CRB3	NM_139161.2	NM_139161.2		92359	28144891	NM_139161.2	CRB3	NP_631900.1	ILMN_1723092	0007400524	A	873	CTGCCTGCCCATCTAGGTCCCCTCTCCTGCATCTGTCTCCCTTCATTGCT	19	+	6418018-6418067	19p13.3a	Homo sapiens crumbs homolog 3 (Drosophila) (CRB3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]			MGC17303	MGC17303
Homo sapiens	RefSeq	NM_139161.2	ILMN_137133	CRB3	NM_139161.2	NM_139161.2		92359	28144891	NM_139161.2	CRB3	NP_631900.1	ILMN_1793932	0003130561	I	737	GGGACCCACCCCCCTGCTTGCGGAACCAACTTTTCTCTGTGTGTCCAGCA	19	+	6417882-6417931	19p13.3a	Homo sapiens crumbs homolog 3 (Drosophila) (CRB3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]			MGC17303	MGC17303
Homo sapiens	RefSeq	XR_037856.1	ILMN_342014	LOC731479	XR_037856.1	XR_037856.1		731479	169211697	XR_037856.1	LOC731479		ILMN_3241245	0001340730	S	487	GGACAAGAGGGATAGGAAGAAGAGATTTGTGGCAGGAAGCCATCACCAGA					PREDICTED: Homo sapiens misc_RNA (LOC731479), miscRNA.					
Homo sapiens	RefSeq	XM_926370.1	ILMN_33765	LOC642989	XM_926370.1	XM_926370.1		642989	88943740	XM_926370.1	LOC642989	XP_931463.1	ILMN_1655710	0006280446	S	222	ACTCTGTAAGGAAGTTCCCAAATACAAACTTATAACCCCAGCTGTGGTCT	1	+	209413609-209413658		PREDICTED: Homo sapiens similar to 40S ribosomal protein S25 (LOC642989), mRNA.					
Homo sapiens	RefSeq	NM_018284.1	ILMN_3653	GBP3	NM_018284.2	NM_018284.2		2635	112382371	NM_018284.2	GBP3	NP_060754.2	ILMN_1725314	0002350189	S	2818	CCTGATTCTTAAAGGTCATACTTGAAATCCTGCCAATTTTCCCCAAAGGG	1	-	89472532-89472581	1p22.2c	Homo sapiens guanylate binding protein 3 (GBP3), mRNA.		Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	DKFZp686L15228; DKFZp686E0974; FLJ10961	FLJ10961
Homo sapiens	RefSeq	NR_015370.1	ILMN_335322	NCRNA00219	NR_015370.1	NR_015370.1		114915	168693616	NR_015370.1	NCRNA00219		ILMN_3244583	0004070376	S	445	GGTGGAAGATGGATGCCTGAAGTGTAGACTGCTGCTAGCTGAATACCATC	5	+	111496992-111496992:111497400-111497448	5q22.2a	Homo sapiens non-protein coding RNA 219 (NCRNA00219), non-coding RNA.				TIGA1; MGC126893; MGC138282	TIGA1; MGC126893; MGC138282
Homo sapiens	RefSeq	NM_005732.2	ILMN_13599	RAD50	NM_133482.1	NM_133482.1		10111	19924130	NM_133482.1	RAD50	NP_597816.1	ILMN_1755023	0001400253	A	5488	TGGTTGGCCCCCAAAGATAGACAGGTCCTGATTTCTAGAACCCGTGACTG	5	+	131954817-131954866	5q31.1b	Homo sapiens RAD50 homolog (S. cerevisiae) (RAD50), transcript variant 2, mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Trimeric protein complex that possesses endonuclease activity; involved in DNA repair and checkpoint signaling. In Saccharomyces the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins related to the Saccharomyces proteins [goid 30870] [pmid 9590181] [evidence IDA]; Trimeric protein complex that possesses endonuclease activity; involved in DNA repair and checkpoint signaling. In Saccharomyces the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins related to the Saccharomyces proteins [goid 30870] [pmid 15279769] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA recombination during mitosis [goid 19] [pmid 8756642] [evidence IDA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [pmid 9590181] [evidence IMP]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 9705271] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 8756642] [evidence TAS]	Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks [goid 14] [pmid 9705271] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 15279769] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 9705271] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 12152085] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RAD50-2; hRad50	RAD50-2; hRad50
Homo sapiens	RefSeq	NM_017750.2	ILMN_28492	RETSAT	NM_017750.2	NM_017750.2		54884	31377747	NM_017750.2	RETSAT	NP_060220.2	ILMN_1702633	0000940477	S	2385	GATCTCTTTTGTGCTGGGTTCAGTGGCTCTTCAGGGGACAGGAAATGCCT	2	-	85423299-85423348	2p11.2g	Homo sapiens retinol saturase (all-trans-retinol 13,14-reductase) (RETSAT), mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [pmid 15358783] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 15358783] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [pmid 15358783] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 15358783] [evidence ISS]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [pmid 15358783] [evidence ISS]; Catalysis of the reaction: all-trans-13,14-dihydroretinol + acceptor = all-trans-retinol + reduced acceptor. Note that this reaction has only been observed to occur in the opposite direction [goid 51786] [pmid 15358783] [evidence ISS]	FLJ20296	FLJ20296
Homo sapiens	RefSeq	XR_037334.1	ILMN_340796	LOC100132899	XR_037334.1	XR_037334.1		100132899	169205748	XR_037334.1	LOC100132899		ILMN_3240258	0004060082	S	2213	AGATGCCAACGGCAAGCTTATCCTGAAGACCACCCACAACTCCGCCTTCG	13	-	108293-108342		PREDICTED: Homo sapiens misc_RNA (LOC100132899), miscRNA.					
Homo sapiens	RefSeq	XM_001720508.1	ILMN_350275	LOC100134379	XM_001720508.1	XM_001720508.1		100134379	169217538	XM_001720508.1	LOC100134379	XP_001720560.1	ILMN_3247633	0002570497	S	209	TCCTACCTGAGGTGGCCAAGAAGTTTCCCAACATGAAGATACAGATCCAT					PREDICTED: Homo sapiens similar to bactericidal/permeability-increasing protein (LOC100134379), mRNA.					
Homo sapiens	RefSeq	NM_207351.2	ILMN_19313	PRRT3	NM_207351.3	NM_207351.3		285368	136255215	NM_207351.3	PRRT3	NP_997234.3	ILMN_1784985	0004070180	S	3622	GCGGAATACAGGGTGGGTGTGCATGGATTCGGGCATGAAGAACAGGGAGC	3	-	9987315-9987364	3p25.3c	Homo sapiens proline-rich transmembrane protein 3 (PRRT3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ33674; MGC105134; MGC33990	FLJ33674; MGC33990; MGC105134
Homo sapiens	RefSeq	NM_014498.2	ILMN_179486	GOLPH4	NM_014498.2	NM_014498.2		27333	29826326	NM_014498.2	GOLPH4	NP_055313.1	ILMN_2186216	0005870221	S	3457	AAACTAATGAGTGTTTGCGTGTGGTGTTTCTATGCGAGCACCCATTCTCA	3	-	169209931-169209980	3q26.2a	Homo sapiens golgi phosphoprotein 4 (GOLPH4), mRNA.				P138; GIMPC; GPP130	P138; GIMPC; GPP130
Homo sapiens	RefSeq	NM_014498.2	ILMN_179486	GOLPH4	NM_014498.2	NM_014498.2		27333	29826326	NM_014498.2	GOLPH4	NP_055313.1	ILMN_1795344	0006100168	S	2674	GAGCTGAAATGTAGCGGCACCCAATTTCTAGACAACGCTCAGCCAACGGA	3	-	169210714-169210750:169210751-169210763	3q26.2a	Homo sapiens golgi phosphoprotein 4 (GOLPH4), mRNA.				P138; GIMPC; GPP130	P138; GIMPC; GPP130
Homo sapiens	RefSeq	NM_014385.1	ILMN_29432	SIGLEC7	NM_014385.2	NM_014385.2		27036	118197275	NM_014385.2	SIGLEC7	NP_055200.1	ILMN_1686706	0003800386	I	514	AGGCCCAACATCCTTATCCCCGGTACCCTGGAGTCTGGCTGCTTCCAGAA	19	+	51647674-51647723	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 7 (SIGLEC7), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10567377] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10499918] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 10567377] [evidence TAS]	CD328; D-siglec; QA79; p75; AIRM1; p75/AIRM1; CDw328; SIGLEC-7	QA79; p75; AIRM1; p75/AIRM1; CDw328; SIGLEC-7
Homo sapiens	RefSeq	NM_001002796.1	ILMN_2499	MCTP1	NM_001002796.1	NM_001002796.1		79772	50582995	NM_001002796.1	MCTP1	NP_001002796.1	ILMN_1658920	0006480326	I	2	TGCTAGACAGCTGCAAGCTGAAAAGTGCCTGCAATTTGCCATTTATTTGT	5	-	94442891-94442940	5q15c	Homo sapiens multiple C2 domains, transmembrane 1 (MCTP1), transcript variant S, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 15528213] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15528213] [evidence IDA]	A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 15528213] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 15528213] [evidence IDA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [pmid 15528213] [evidence IDA]	FLJ22344	FLJ22344
Homo sapiens	Unigene	Hs.442773	ILMN_92465	HS.442773	Hs.442773		Hs.442773		47329400	CN312986			ILMN_1886847	0000240762	S	518	TAACTTGCCCAAGGTCGCACAGCTAGTAAGTGGCAGACATCCAGAGTCTC	1	-	86585181-86585230		17000532648239 GRN_ES Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002180.1	ILMN_12576	IGHMBP2	NM_002180.2	NM_002180.2		3508	119392093	NM_002180.2	IGHMBP2	NP_002171.2	ILMN_1801909	0002100050	S	3638	TGAGTCTGGGGGGCACCTCTTTCTGGCCTGTGCACCTCTCTCTGGCTTAT	11	+	68464329-68464378	11q13.2b	Homo sapiens immunoglobulin mu binding protein 2 (IGHMBP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8493094] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8493094] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 8349627] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 8349627] [evidence TAS]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 8493094] [evidence TAS]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 8349627] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SMARD1; SMUBP2; HMN6; CATF1; FLJ41171; HCSA; FLJ34220	SMARD1; SMUBP2; CATF1; HCSA
Homo sapiens	RefSeq	NM_024636.1	ILMN_20900	STEAP4	NM_024636.2	NM_024636.2		79689	100815814	NM_024636.2	STEAP4	NP_078912.2	ILMN_1772036	0000540091	S	1722	CCCAGAGGCCATGGAGCTGAGATTGAGACTAGCCTTGTGGTTTCACACTA	7	-	87908426-87908475	7q21.12b	Homo sapiens STEAP family member 4 (STEAP4), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	DKFZp666D049; STAMP2; TIARP; TNFAIP9; FLJ23153	DKFZp666D049; STAMP2; TIARP; TNFAIP9; FLJ23153
Homo sapiens	RefSeq	NM_001010896.1	ILMN_13232	C10ORF113	NM_001010896.1	NM_001010896.1		387638	58219009	NM_001010896.1	C10orf113	NP_001010896.1	ILMN_1770130	0003450022	S	241	GGCCAACGCTTGCCAGGTGGCTGCGGAGAGTCAGCTTCAGTCTCTACAAG	10	-	21454925-21454974	10p12.31b	Homo sapiens chromosome 10 open reading frame 113 (C10orf113), mRNA.				bA165O3.1	bA165O3.1
Homo sapiens	RefSeq	NM_152468.3	ILMN_21747	TMC8	NM_152468.3	NM_152468.3		147138	31377553	NM_152468.3	TMC8	NP_689681.2	ILMN_2211534	0005560133	S	2260	AAGCAGCTGGTGTGGCAGGTTCAGGAGAAGTGGCACCTGGTGGAGGACCT	17	+	73646902-73646916:73648510-73648544	17q25.3b	Homo sapiens transmembrane channel-like 8 (TMC8), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			EVIN2; EVER2; EV2; MGC40121; MGC102701	EVIN2; EVER2; EV2; MGC40121; MGC102701
Homo sapiens	RefSeq	XM_372274.3	ILMN_178103	LOC644644	XM_372274.4	XM_372274.4		644644	113430231	XM_372274.4	LOC644644	XP_372274.4	ILMN_1753985	0004760408	S	878	ACGTCACCAAACTTCCTGTGGATCACCTCGCCTGGGGTAACTCGTGCGCT	X	+	75442-75491		PREDICTED: Homo sapiens similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1) (LOC644644), mRNA.					
Homo sapiens	RefSeq	NM_015631.4	ILMN_365651	TCTN3	NM_015631.4	NM_015631.4		26123	194272211	NM_015631.4	TCTN3	NP_056446.3	ILMN_3244526	0005910615	S	2394	TCAGCCCTCAGGCACAGTTGGGCCAAGCAGAAAGAGAGAAACACTTCTGC				10q23.33d	Homo sapiens tectonic family member 3 (TCTN3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]			
Homo sapiens	RefSeq	NM_058175.1	ILMN_2493	COL6A2	NM_058175.2	NM_058175.2		1292	115527069	NM_058175.2	COL6A2	NP_478055.2	ILMN_1765017	0004010195	I	2708	TTTCCTCTACCGACTCGCCAGCCCAAATGCCGCTCTTCACTCTGGCCTCG	21	+	46373409-46373458	21q22.3f	Homo sapiens collagen, type VI, alpha 2 (COL6A2), transcript variant 2C2a', mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence NAS]	PP3610; DKFZp586E1322	PP3610; DKFZp586E1322
Homo sapiens	RefSeq	NM_005844.2	ILMN_3917	HCG9	NM_005844.2	NM_005844.2		10255	30240938	NM_005844.2	HCG9	NP_005835.2	ILMN_1814611	0005960541	S	502	AGGCCTGTAATCCCAGCTCTGGAAGCTGAAGGATAGCTTGAGCCCAGGAG	6	+	30054008-30054057	6p21.33b	Homo sapiens HLA complex group 9 (HCG9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HCGIX4; HCGIX; HCGIX-4	HCGIX4; HCGIX; HCGIX-4
Homo sapiens	RefSeq	NM_005566.3	ILMN_365991	LDHA	NM_005566.3	NM_005566.3		3939	207028465	NM_005566.3	LDHA	NP_005557.1	ILMN_3251145	0006520386	M	2130	TGTCACTATAGGGAACACAGATTTTTGAGATCTTGTCCTCTGGAAGCTGG	11	+	18429687-18429736	11p15.1c	Homo sapiens lactate dehydrogenase A (LDHA), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2434947] [evidence TAS]	 [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA];  [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [pmid 2334430] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	RefSeq	NM_005527.2	ILMN_164799	HSPA1L	NM_005527.3	NM_005527.3		3305	124256495	NM_005527.3	HSPA1L	NP_005518.3	ILMN_1654566	0006280471	S	2230	GGAGAAGGAGTCTCATGCACCACCTATCACACTCCCTCACATCCTGTTTC	6	-	31885632-31885681	6p21.33a	Homo sapiens heat shock 70kDa protein 1-like (HSPA1L), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 9685725] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	HSP70-HOM; hum70t	HSP70-HOM; hum70t
Homo sapiens	RefSeq	NM_012293.1	ILMN_165066	PXDN	NM_012293.1	NM_012293.1		7837	109150415	NM_012293.1	PXDN	NP_036425.1	ILMN_2363658	0006400397	A	6472	GTGCGGTCTGGGCCAGTCACAAGGAATTGTGTTGTCTAAGCCAAAGGGGG	2	-	1636557-1636564:1637179-1637220	2p25.3e	Homo sapiens peroxidasin homolog (Drosophila) (PXDN), mRNA. XM_935183 XM_935184 XM_936786 XM_942966 XM_942982 XM_942986 XM_942994 XM_943000	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 11103812] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Blocks the binding of interleukin-1 to the interleukin-1 receptor complex [goid 5152] [pmid 11103812] [evidence NAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	D2S448E; D2S448; VPO; MG50; KIAA0230; PXN; PRG2	D2S448E; D2S448; VPO; MG50; KIAA0230; PXN; PRG2
Homo sapiens	RefSeq	NM_025190.2	ILMN_171738	ANKRD36B	NM_025190.2	NM_025190.2		57730	124517694	NM_025190.2	ANKRD36B	NP_079466.2	ILMN_2189614	0006100066	S	5259	CTTTCACAAAACTGCTGCCTGGTGCCAAAAAGGCTGGGGACTGCTGCTCT	2	-	97488203-97488252	2q11.2b	Homo sapiens ankyrin repeat domain 36B (ANKRD36B), mRNA.				MGC149865; MGC167812; FLJ21281; FLJ90089; MGC149864	MGC149865; FLJ21281; MGC149864; MGC167812; FLJ90089
Homo sapiens	RefSeq	XM_931666.1	ILMN_171738	ANKRD36B	NM_025190.2	NM_025190.2		57730	124517694	NM_025190.2	ANKRD36B	NP_079466.2	ILMN_1780806	0003060010	S	339	AAAGGACTGCCCTACATTTGGCCTGTGCCACTGGCCAACCGGAAATGGTA	2	-	97568247-97568293:97572420-97572422	2q11.2b	Homo sapiens ankyrin repeat domain 36B (ANKRD36B), mRNA.				MGC149865; MGC167812; FLJ21281; FLJ90089; MGC149864	
Homo sapiens	RefSeq	XM_933004.1	ILMN_41508	LOC653648	XM_933004.1	XM_933004.1		653648	89029866	XM_933004.1	LOC653648	XP_938097.1	ILMN_1651984	0007150288	S	1	ATGCCCTACGTGGGGGTGGGCATCGCGGGGAGTGAATCCACGATCTGGGA	9	+	86473547-86473596		PREDICTED: Homo sapiens similar to neurotrophic tyrosine kinase, receptor, type 2 (LOC653648), mRNA.					
Homo sapiens	RefSeq	NM_001605.1	ILMN_29917	AARS	NM_001605.2	NM_001605.2		16	109148541	NM_001605.2	AARS	NP_001596.2	ILMN_1662364	0000290603	S	3263	AGATAACGGCTCTCCAGACCTGAGCTTTCCGCGTCAGCAAGTAGGAATCG	16	-	70286328-70286377	16q22.1f	Homo sapiens alanyl-tRNA synthetase (AARS), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7654687] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7654687] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6419] [pmid 7761427] [evidence TAS]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [pmid 7654687] [evidence TAS]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]	Interacting selectively with transfer RNA [goid 49] [pmid 7654687] [evidence TAS]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala) [goid 4813] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Homo sapiens	RefSeq	XM_934870.1	ILMN_31395	LOC653562	XM_934870.1	XM_934870.1		653562	89040186	XM_934870.1	LOC653562	XP_939963.1	ILMN_1764944	0005550040	I	178	ATTGGCCGCCGAGGTGGGAAAGCAGGCCTGCGCCTTGGGGTCTCCTCGAA	16	+	33686549-33686598	16p11.2a	PREDICTED: Homo sapiens similar to solute carrier family 6 (neurotransmitter transporter, creatine), member 8, transcript variant 2 (LOC653562), mRNA.					
Homo sapiens	RefSeq	NM_023940.2	ILMN_7453	RASL11B	NM_023940.2	NM_023940.2		65997	34147350	NM_023940.2	RASL11B	NP_076429.1	ILMN_2148469	0003370129	S	1757	GGCAATGACGTTGGGTTGCTTCCTAGGCCTGGCTGAGTTGTGCCTAAGGG	4	+	53427559-53427608	4q12a	Homo sapiens RAS-like, family 11, member B (RASL11B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC2827; MGC4499	MGC2827; MGC4499
Homo sapiens	RefSeq	NR_030626.1	ILMN_388164	MIR921	NR_030626.1	NR_030626.1		100126349	262206191	NR_030626.1	MIR921		ILMN_3310628	0006900110	S	2	TAGTGAGGGACAGAACCAGGATTCAGACTCAGGTCCATGGGCCTGGATCA				1q24.1b	Homo sapiens microRNA 921 (MIR921), microRNA.					
Homo sapiens	RefSeq	NM_080632.1	ILMN_28844	UPF3B	NM_023010.2	NM_023010.2		65109	18375526	NM_023010.2	UPF3B	NP_075386.1	ILMN_1798163	0004640239	A	2201	GTGTTTGATCTTAGGTCTCATGATCTGAGTGCATACCCTCTCCAGGAAGG	X	-	118968080-118968129	Xq24c	Homo sapiens UPF3 regulator of nonsense transcripts homolog B (yeast) (UPF3B), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11163187] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11163187] [evidence NAS]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 11163187] [evidence NAS]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [pmid 11163187] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	UPF3X; RENT3B; MRXS14; HUPF3B	MRXS14; UPF3X; RENT3B; HUPF3B
Homo sapiens	RefSeq	NM_003433.2	ILMN_17488	ZNF132	NM_003433.2	NM_003433.2		7691	42733609	NM_003433.2	ZNF132	NP_003424.2	ILMN_1812898	0004730187	S	2667	CAGGAACCTTTGCAGGGCCATCTCACCCATGCAGCATAAGGCAGAAGCCA	19	-	63636307-63636356	19q13.43c	Homo sapiens zinc finger protein 132 (ZNF132), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126390; pHZ-12; MGC126391	MGC126390; pHZ-12; MGC126391
Homo sapiens	RefSeq	XM_001128169.2	ILMN_177494	LOC728687	XM_001128169.2	XM_001128169.2		728687	169216531	XM_001128169.2	LOC728687	XP_001128169.2	ILMN_3247242	0002850541	S	1928	GTGGCCTGGAGTCTCGCTCTGTAGCCTAGGCTGGAGTACAGTGGCGCGAT	X	+	128346-128354:128441-128442:128638-128676		PREDICTED: Homo sapiens similar to hCG1981372 (LOC728687), mRNA.					
Homo sapiens	RefSeq	NM_178563.1	ILMN_23118	AGBL3	NM_178563.1	NM_178563.1		340351	42558242	NM_178563.1	AGBL3	NP_848658.1	ILMN_1672767	0002350059	S	2811	GATGTCAGCTCCATCACATTTGGCAAAGAACAAAGACCCAAAGCTGTCAG	7	+	134451003-134451052	7q33b	Homo sapiens ATP/GTP binding protein-like 3 (AGBL3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12983; MGC32955	FLJ12983; MGC32955
Homo sapiens	RefSeq	NM_198395.1	ILMN_30130	G3BP1	NM_198395.1	NM_198395.1		10146	38327551	NM_198395.1	G3BP1	NP_938405.1	ILMN_2357809	0006520730	A	1377	AAGAAGACTCGAGCTGCCAGGGAAGGCGACCGACGAGATAATCGCCTTCG	5	+	151160544-151160593	5q33.1e	Homo sapiens GTPase activating protein (SH3 domain) binding protein 1 (G3BP1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9889278] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8649363] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [pmid 9889278] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 9889278] [evidence TAS]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8649363] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HDH-VIII; G3BP; MGC111040	HDH-VIII; G3BP; MGC111040
Homo sapiens	RefSeq	NM_033064.2	ILMN_27014	ATCAY	NM_033064.3	NM_033064.3		85300	110225342	NM_033064.3	ATCAY	NP_149053.1	ILMN_1656576	0007050577	S	3349	GGGCGGGCACATTCTCCAGGCCCTTCTTCCTAGCTCTGTGGTTGACCTCT	19	+	3877414-3877463	19p13.3e	Homo sapiens ataxia, cerebellar, Cayman type (caytaxin) (ATCAY), mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		CLAC; BNIP-H; KIAA1872	CLAC; BNIP-H; KIAA1872
Homo sapiens	RefSeq	NM_080733.1	ILMN_11893	WFDC2	NM_080733.1	NM_080733.1		10406	18379355	NM_080733.1	WFDC2	NP_542771.1	ILMN_1685427	0002120687	I	271	CGAAGAAAGTGAGGAATCCTCCCTGGACACTGTATCGCCCTTCGTCGTCT	20	+	43533226-43533275	20q13.12b	Homo sapiens WAP four-disulfide core domain 2 (WFDC2), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1686187] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1686187] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 1686187] [evidence TAS]	Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	dJ461P17.6; WAP5; MGC57529; HE4	dJ461P17.6; WAP5; MGC57529; HE4
Homo sapiens	RefSeq	NM_001013679.1	ILMN_14638	LOC401072	NM_001013679.1	NM_001013679.1		401072	61966812	NM_001013679.1	LOC401072	NP_001013701.1	ILMN_2097358	0004210020	S	3867	AGCAGACGTTCAGCAGCAACAATGGAAGCAAGAAGGTAACTAACATCTGG	3	-	70745586-70745635	3p14.1a	Homo sapiens hypothetical gene supported by AK125942 (LOC401072), mRNA.					
Homo sapiens	Unigene	Hs.126415	ILMN_76258	HS.126415	Hs.126415		Hs.126415		27879886	BX114970			ILMN_1853612	0001570091	S	452	GAGACAAGACCCGTCCTTTCCATGGGAGAGGCAGTCATTGACAAGTGTCC	3	+	162498085-162498134		BX114970 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998K173861, mRNA sequence					
Homo sapiens	RefSeq	NM_001005853.1	ILMN_9485	OR6B2	NM_001005853.1	NM_001005853.1		389090	54291713	NM_001005853.1	OR6B2	NP_001005853.1	ILMN_1672658	0004040440	S	885	GGAATTTAAGGACGCCTTGAAAAAGGCCTTGGGCTTGGGTCAAACTTCAC	2	-	240968912-240968961	2q37.3e	Homo sapiens olfactory receptor, family 6, subfamily B, member 2 (OR6B2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR6B2P; OR2-1	OR6B2P; OR2-1
Homo sapiens	RefSeq	NM_024806.2	ILMN_163248	C11ORF63	NM_024806.2	NM_024806.2		79864	40217798	NM_024806.2	C11orf63	NP_079082.2	ILMN_2268593	0001690544	I	2571	GCAGAACAGACACGAAAGGGAAAAACAGGCTGTGGCTGCTTTCAAAGTCC	11	+	122335300-122335349	11q24.1b	Homo sapiens chromosome 11 open reading frame 63 (C11orf63), transcript variant 1, mRNA.				FLJ23554	FLJ23554
Homo sapiens	RefSeq	NM_199124.1	ILMN_163248	C11ORF63	NM_024806.2	NM_024806.2		79864	40217798	NM_024806.2	C11orf63	NP_079082.2	ILMN_1709050	0001710646	A	988	AGCTCAAGTTCACATAACGAGGTTTTCCTGCCGGGATCACGTGGCCCTCG	11	+	122280189-122280238	11q24.1b	Homo sapiens chromosome 11 open reading frame 63 (C11orf63), transcript variant 1, mRNA.				FLJ23554	FLJ23554
Homo sapiens	RefSeq	NM_024806.2	ILMN_163248	C11ORF63	NM_024806.2	NM_024806.2		79864	40217798	NM_024806.2	C11orf63	NP_079082.2	ILMN_1680659	0006040382	I	2425	CCTCGGCAGAAGGCTTTGGAATACGCTAAGACCATCCCCAAACCCAAACC	11	+	122333398-122333409:122335166-122335203	11q24.1b	Homo sapiens chromosome 11 open reading frame 63 (C11orf63), transcript variant 1, mRNA.				FLJ23554	FLJ23554
Homo sapiens	RefSeq	NM_001030010.1	ILMN_27131	ALDH3B1	NM_000694.2	NM_000694.2		221	71773289	NM_000694.2	ALDH3B1	NP_000685.1	ILMN_1728662	0002970356	A	2622	GCTTGAGAAACCTACATTTGGACAATGAGAGGCTGCTCCTGCGGCCTGCG	11	+	67553126-67553175	11q13.2a	Homo sapiens aldehyde dehydrogenase 3 family, member B1 (ALDH3B1), transcript variant 1, mRNA.		The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells [goid 6066] [pmid 7828891] [evidence TAS]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7828891] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [pmid 7828891] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ26433; ALDH7; ALDH4	ALDH7; ALDH4; FLJ26433
Homo sapiens	RefSeq	NM_000694.2	ILMN_27131	ALDH3B1	NM_000694.2	NM_000694.2		221	71773289	NM_000694.2	ALDH3B1	NP_000685.1	ILMN_1727965	0001850440	I	239	AGCCTTCGAGTCGGAGGTGTCTGAGGTTGCCATCAGCCAGGGCGAGGTCA	11	+	67542575-67542624	11q13.2a	Homo sapiens aldehyde dehydrogenase 3 family, member B1 (ALDH3B1), transcript variant 1, mRNA.		The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells [goid 6066] [pmid 7828891] [evidence TAS]; The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7828891] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [pmid 7828891] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ26433; ALDH7; ALDH4	ALDH7; ALDH4; FLJ26433
Homo sapiens	RefSeq	XM_926643.1	ILMN_162704	LOC402715	NM_001045546.1	NM_001045546.1		402715	113930690	NM_001045546.1	LOC402715	NP_001039011.1	ILMN_1681464	0000630605	A	1040	CTACCTCTGAAAGCTATACCTCCCATGTTCAGAATGAGACTCTTGGGACC	7	+	144338968-144339017	7q35b	Homo sapiens similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1) (LOC402715), mRNA.					
Homo sapiens	RefSeq	NM_003697.1	ILMN_10279	OR5F1	NM_003697.1	NM_003697.1		338674	53828733	NM_003697.1	OR5F1	NP_003688.1	ILMN_1764216	0002450474	S	416	CCGTCTACCTAAAAATGGCAGCCGGGGCTTTTGCTGCAGGGTTGCTGAAC	11	-	55761636-55761685	11q11c	Homo sapiens olfactory receptor, family 5, subfamily F, member 1 (OR5F1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9787077] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 9787077] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 9787077] [evidence NAS]	OR11-10	OR11-10
Homo sapiens	RefSeq	NM_003697.1	ILMN_10279	OR5F1	NM_003697.1	NM_003697.1		338674	53828733	NM_003697.1	OR5F1	NP_003688.1	ILMN_2070530	0003800546	S	716	CCACGTGTGCCTCTCACCTGACAGCCATAATTCTGTTCTATGCCACCTGC	11	-	55761336-55761385	11q11c	Homo sapiens olfactory receptor, family 5, subfamily F, member 1 (OR5F1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9787077] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 9787077] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 9787077] [evidence NAS]	OR11-10	OR11-10
Homo sapiens	RefSeq	XM_929241.1	ILMN_162260	LOC646300	XM_001130380.1	XM_001130380.1		646300	113415240	XM_001130380.1	LOC646300	XP_001130380.1	ILMN_1685447	0003940164	S	511	ATCATCCCCGTGGTCATCACCTTCACAGAGGGGCACAACCTCCCGGACAC				3q21.3d	PREDICTED: Homo sapiens similar to alpha 3 type VI collagen isoform 1 precursor (LOC646300), mRNA.					
Homo sapiens	RefSeq	XM_940065.1	ILMN_162260	LOC646300	XM_001130380.1	XM_001130380.1		646300	113415240	XM_001130380.1	LOC646300	XP_001130380.1	ILMN_1771665	0000380762	S	911	CTGGCCACGCCCTGGAGTGGACGCTGGAGAATGTGCTCCTGGCAGCCCCT				3q21.3d	PREDICTED: Homo sapiens similar to alpha 3 type VI collagen isoform 1 precursor (LOC646300), mRNA.					
Homo sapiens	RefSeq	NM_023924.2	ILMN_12952	BRD9	NM_023924.3	NM_023924.3		65980	141801757	NM_023924.3	BRD9	NP_076413.2	ILMN_1651405	0002190563	A	2763	TGATGAGCCTGGGAAAGGAGTGTGTTCTGCCTGCCCGTTACAGTGGAGCG	5	-	916886-916935	5p15.33d	Homo sapiens bromodomain containing 9 (BRD9), transcript variant 1, mRNA.				LAVS3040; DKFZp686L0539; PRO9856; DKFZp434D0711	LAVS3040; DKFZp686L0539; PRO9856; DKFZp434D0711
Homo sapiens	RefSeq	NM_023924.2	ILMN_12952	BRD9	NM_023924.3	NM_023924.3		65980	141801757	NM_023924.3	BRD9	NP_076413.2	ILMN_1811481	0005490537	I	980	GAGCGGCTGTTAGCTTTGAAGCGCAGCATGTCGTTTATGCAGGACATGGA	5	-	939832-939881	5p15.33d	Homo sapiens bromodomain containing 9 (BRD9), transcript variant 1, mRNA.				LAVS3040; DKFZp686L0539; PRO9856; DKFZp434D0711	LAVS3040; DKFZp686L0539; PRO9856; DKFZp434D0711
Homo sapiens	RefSeq	NM_001360.1	ILMN_2138	DHCR7	NM_001360.1	NM_001360.1		1717	4503320	NM_001360.1	DHCR7	NP_001351.1	ILMN_1815626	0006550048	S	2169	AAAGGGGCTTTCATGTCGTTTCCTTCCTGCTCCTGCTGCACAGCTGCCAG	11	-	70823473-70823522	11q13.4a	Homo sapiens 7-dehydrocholesterol reductase (DHCR7), mRNA.	The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [pmid 9878250] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9878250] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 9465114] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [pmid 9465114] [evidence IMP]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: cholesterol + NADP+ = cholesta-5,7-dien-3-beta-ol + NADPH + H+ [goid 47598] [pmid 9465114] [evidence EXP]; Catalysis of the reaction: cholesterol + NADP+ = cholesta-5,7-dien-3-beta-ol + NADPH + H+ [goid 47598] [pmid 9465114] [evidence IDA]	SLOS	SLOS
Homo sapiens	RefSeq	NR_003944.1	ILMN_339229	SNORD78	NR_003944.1	NR_003944.1		692198	157738637	NR_003944.1	SNORD78		ILMN_3249211	0002490523	S	3	GTAATGATGTTGATCAAATGTCTGACCTGAAATGAGCATGTAGACAAAGG	1	-	173834772-173834821	1q25.1a	Homo sapiens small nucleolar RNA, C/D box 78 (SNORD78), small nucleolar RNA.				U78	U78
Homo sapiens	RefSeq	NM_213605.2	ILMN_29277	ZNF517	NM_213605.2	NM_213605.2		340385	125490355	NM_213605.2	ZNF517	NP_998770.2	ILMN_2105438	0002760681	S	1413	AGCTACACGCTGAACGAGCACTACCGGCTCCACAGCGGCGAGAGGCCATA	8	+	146004411-146004460	8q24.3h	Homo sapiens zinc finger protein 517 (ZNF517), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_018052.3	ILMN_161940	VAC14	XM_001125720.1	XM_001125720.1		55697	113426481	XM_001125720.1	VAC14	XP_001125720.1	ILMN_1750792	0003840743	A	1881	GAGATTCAGCAGCGAACGGAAGCTCCTGGAGGTCAGAGGCCCTTTCATCA				16q22.1f	PREDICTED: Homo sapiens Vac14 homolog (S. cerevisiae) (VAC14), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8611628] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 8611628] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		TAX1BP2; FLJ36622; MGC149816; TRX; ArPIKfyve; FLJ10305; MGC149815
Homo sapiens	RefSeq	NM_016823.2	ILMN_25875	CRK	NM_016823.2	NM_016823.2		1398	41327711	NM_016823.2	CRK	NP_058431.2	ILMN_1803302	0004780086	A	1867	CCTAACTAATGGGATCCAGCAGGGCCATTTCTCCAGAGGGCCAGTATCCT	17	-	1325938-1325987	17p13.3e	Homo sapiens v-crk sarcoma virus CT10 oncogene homolog (avian) (CRK), transcript variant II, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10748058] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10748058] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7806500] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16284401] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10748058] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9069267] [evidence EXP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10748058] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15886098] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11278465] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14657239] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 9472046] [evidence IPI]; Interacting selectively with a phosphorylated amino acid residue within a protein [goid 45309] [evidence IEA]	CRKII	CRKII
Homo sapiens	RefSeq	NM_016823.2	ILMN_25875	CRK	NM_016823.2	NM_016823.2		1398	41327711	NM_016823.2	CRK	NP_058431.2	ILMN_1686805	0006550196	A	1636	GGGATTCTTTTAGCCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGT	17	-	1326169-1326218	17p13.3e	Homo sapiens v-crk sarcoma virus CT10 oncogene homolog (avian) (CRK), transcript variant II, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10748058] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10748058] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7806500] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16284401] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10748058] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9069267] [evidence EXP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10748058] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15886098] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11278465] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14657239] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 9472046] [evidence IPI]; Interacting selectively with a phosphorylated amino acid residue within a protein [goid 45309] [evidence IEA]	CRKII	CRKII
Homo sapiens	RefSeq	NM_016823.2	ILMN_25875	CRK	NM_016823.2	NM_016823.2		1398	41327711	NM_016823.2	CRK	NP_058431.2	ILMN_1666494	0007040014	I	851	GCCAGGGTTATCCAGAAGCGAGTCCCCAATGCCTACGACAAGACAGCCTT	17	-	1339923-1339972	17p13.3e	Homo sapiens v-crk sarcoma virus CT10 oncogene homolog (avian) (CRK), transcript variant II, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10748058] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10748058] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7806500] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16284401] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10748058] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9069267] [evidence EXP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10748058] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15886098] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11278465] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14657239] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9819391] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 9472046] [evidence IPI]; Interacting selectively with a phosphorylated amino acid residue within a protein [goid 45309] [evidence IEA]	CRKII	CRKII
Homo sapiens	RefSeq	NM_130902.1	ILMN_19288	COX7B2	NM_130902.2	NM_130902.2		170712	115527067	NM_130902.2	COX7B2	NP_570972.2	ILMN_1674658	0000580754	S	152	CCAGTAGCTGAAGGCAACTGCAATCCTTCATGATGTTTCCCTTGGCCAGA	4	-	46737112-46737161	4p12b	Homo sapiens cytochrome c oxidase subunit VIIb2 (COX7B2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	MGC102754	MGC102754
Homo sapiens	RefSeq	XM_939148.1	ILMN_32874	LOC654091	XM_939148.1	XM_939148.1		654091	89066147	XM_939148.1	LOC654091	XP_944241.1	ILMN_1674256	0003990470	S	143	CCCTAGCAATGATAAGAGGAAACACTCCCGCGCCTGTGGGTGGCGATGAC					PREDICTED: Homo sapiens similar to Probable G-protein coupled receptor 114 precursor (G-protein coupled receptor PGR27) (LOC654091), mRNA.					
Homo sapiens	RefSeq	XM_927564.1	ILMN_175927	FRG2B	NM_001080998.1	NM_001080998.1		441581	124487404	NM_001080998.1	FRG2B	NP_001074467.1	ILMN_1689120	0002940039	S	537	CGGGCCCTAGGAGTCCAAACACCGTCAATTCGAAAAAGCTTGGTGACCTC	10	-	135438906-135438955	10q26.3f	Homo sapiens FSHD region gene 2 family, member B (FRG2B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	RefSeq	NM_001080998.1	ILMN_175927	FRG2B	NM_001080998.1	NM_001080998.1		441581	124487404	NM_001080998.1	FRG2B	NP_001074467.1	ILMN_2203266	0006660176	S	242	CAATCCAAACAAGGAGAATTCTGAGGAAACCAAGCTCAAGGCCGGGAACA	10	-	135439747-135439796	10q26.3f	Homo sapiens FSHD region gene 2 family, member B (FRG2B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	RefSeq	NM_012176.2	ILMN_7376	FBXO4	NM_012176.2	NM_012176.2		26272	51093871	NM_012176.2	FBXO4	NP_036308.1	ILMN_1656691	0001570075	I	1113	CTAAATCACCCATGGCTGGTCCAGGATACAGAGGCTGAAACTCTGACTGG	5	+	41939701-41939718:41941294-41941325	5p13.1a	Homo sapiens F-box protein 4 (FBXO4), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 16275645] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [pmid 16275645] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 16275645] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [pmid 16275645] [evidence IDA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16275645] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16275645] [evidence IPI]	DKFZp547N213; FBX4; FLJ10141	DKFZp547N213; FBX4; FLJ10141
Homo sapiens	RefSeq	NM_007055.2	ILMN_175644	POLR3A	NM_007055.2	NM_007055.2		11128	39725937	NM_007055.2	POLR3A	NP_008986.2	ILMN_2197247	0003140452	S	5174	CCCGGGGTAGCCATTGGTTCTTGGATCTGTGTTAGAATGAGTGCTTTCCC	10	-	79736279-79736328	10q22.3c	Homo sapiens polymerase (RNA) III (DNA directed) polypeptide A, 155kDa (POLR3A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5666] [evidence NAS]	The synthesis of RNA on a template of DNA [goid 6351] [pmid 9331371] [evidence NAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 9331371] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	RPC155; hRPC155; RPC1	RPC155; hRPC155; RPC1
Homo sapiens	RefSeq	NM_000202.2	ILMN_2023	IDS	NM_000202.3	NM_000202.3		3423	115527099	NM_000202.3	IDS	NP_000193.1	ILMN_1758626	0000130360	I	1809	ATGTGCTCCCTTCCAGCTGGTGAGAGGAGGAGTTAGAGCTGGTCGTTTTG	X	-	148372103-148372152	Xq28b	Homo sapiens iduronate 2-sulfatase (Hunter syndrome) (IDS), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the hydrolysis of the 2-sulfate groups of the L-iduronate 2-sulfate units of dermatan sulfate, heparan sulfate and heparin [goid 4423] [pmid 2122463] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MPS2; SIDS	MPS2; SIDS
Homo sapiens	RefSeq	XR_001373.1	ILMN_36316	C15ORF28	XR_001373.1	XR_001373.1		80035	89039048	XR_001373.1	C15orf28		ILMN_1686662	0001980259	A	2801	CAGGTCATCCAACCTGGAATCTTAGCTTTGACCCCCAACCTTCTCCCGGC				15q23a	PREDICTED: Homo sapiens chromosome 15 open reading frame 28 (C15orf28), misc RNA.					
Homo sapiens	RefSeq	NM_000287.2	ILMN_3043	PEX6	NM_000287.2	NM_000287.2		5190	21361243	NM_000287.2	PEX6	NP_000278.2	ILMN_1683279	0003440086	S	3067	TCCAGGAGATCCCAGGGTGCAAAGTGGCATTGAGACAGCAGCAACAGCTC	6	-	43039877-43039926	6p21.1d	Homo sapiens peroxisomal biogenesis factor 6 (PEX6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8670792] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 11439091] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 16854980] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16854980] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of directing proteins towards the peroxisome using signals contained within the protein [goid 6625] [pmid 16854980] [evidence IMP]; The process by which proteins are moved across the peroxisomal membrane into the matrix. It is likely that the peroxisome targeting sequence receptor remains associated with cargo proteins during translocation [goid 16561] [pmid 8670792] [evidence IMP]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 8670792] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16854980] [evidence IMP]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 16854980] [evidence IPI]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 16854980] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive some other reaction, for example ion transport across a membrane [goid 42623] [pmid 16854980] [evidence IMP]	PAF-2; PAF2; PXAAA1	PAF-2; PAF2; PXAAA1
Homo sapiens	RefSeq	NM_014369.2	ILMN_165243	PTPN18	NM_014369.2	NM_014369.2		26469	18375654	NM_014369.2	PTPN18	NP_055184.2	ILMN_1770005	0002030332	S	2456	TATCTAGGCAGACCCCAGCCAGACCCCCGCCAGACAGACTCCCAACCAGA	2	+	130848277-130848326	2q21.1b	Homo sapiens protein tyrosine phosphatase, non-receptor type 18 (brain-derived) (PTPN18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 8950995] [evidence TAS]	 [goid 4726] [pmid 8950995] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	BDP1	BDP1
Homo sapiens	RefSeq	NM_001005407.1	ILMN_23161	CACNA1H	NM_001005407.1	NM_001005407.1		8912	53832010	NM_001005407.1	CACNA1H	NP_001005407.1	ILMN_2397188	0000730259	A	7796	TTCCGCTCGGGCCTTCCCAGAAGCGTCCTGTGACTCTGGGAGAGGTGACA	16	+	1210952-1210995:1210996-1211001	16p13.3e	Homo sapiens calcium channel, voltage-dependent, T type, alpha 1H subunit (CACNA1H), transcript variant 2, mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 10861024] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9670923] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9670923] [evidence NAS]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [pmid 10861024] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9670923] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a low voltage-gated channel [goid 8332] [pmid 10861024] [evidence TAS]	CACNA1HB; FLJ90484; Cav3.2	CACNA1HB; FLJ90484; Cav3.2
Homo sapiens	RefSeq	NM_153261.3	ILMN_20778	TMEM188	NM_153261.4	NM_153261.4		255919	142384009	NM_153261.4	TMEM188	NP_694993.2	ILMN_1653134	0005340148	S	1609	TCCTATGCCTTCACCAGAATAACTTGGGAGTGGTGCCAGAAACTAGAGTC	16	+	48628012-48628061	16q12.1c	Homo sapiens transmembrane protein 188 (TMEM188), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C16orf69; FLJ38101; DKFZp313D2416	FLJ38101; DKFZp313D2416
Homo sapiens	RefSeq	NM_020363.2	ILMN_21485	DAZ2	NM_020363.2	NM_020363.2		57055	54292108	NM_020363.2	DAZ2	NP_065096.1	ILMN_1779475	0000540372	A	651	TGCAGCCCCAAATCACGCCGAATCCTGTAACTCAGCACGTTCAGGCTTAT	Y	+	23783689-23783732:23785133-23785138	Yq11.223d	Homo sapiens deleted in azoospermia 2 (DAZ2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The union of male and female gametes to form a zygote [goid 7338] [pmid 8896558] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7670487] [evidence TAS]	MGC126442; pDP1678	MGC126442; pDP1678
Homo sapiens	Unigene	Hs.581967	ILMN_134148	HS.581967	Hs.581967		Hs.581967		15344730	BI519938			ILMN_1859531	0001450017	S	676	ACTGCAAGCGGGGGGACATATGAGTCCACAAAACAGCTAAGAGCAGCAGG	4	-	13993623-13993672		603071720F1 NIH_MGC_119 Homo sapiens cDNA clone IMAGE:5163701 5, mRNA sequence					
Homo sapiens	RefSeq	NM_024031.2	ILMN_24903	PRR14	NM_024031.2	NM_024031.2		78994	31543177	NM_024031.2	PRR14	NP_076936.1	ILMN_1745329	0007570711	S	2019	GCCCCATCTGTTGGTCATCCATCCTGAAGGGACAGGAAACCTCCCAGGCA	16	+	30575136-30575185	16p11.2c	Homo sapiens proline rich 14 (PRR14), mRNA.				DKFZp781A13198; MGC3121	DKFZp781A13198; MGC3121
Homo sapiens	RefSeq	NM_001025489.1	ILMN_162442	LOC441178	XR_017854.1	XR_017854.1		441178	113417781	XR_017854.1	LOC441178		ILMN_1696600	0003170121	S	44	TCAGAAAGGAATGTGCCAATGATGGGACTTAAGCTGGTGAAAACCACGTG	6	-	167827492-167827541	6q27d	PREDICTED: Homo sapiens hypothetical LOC441178 (LOC441178), misc RNA.					
Homo sapiens	RefSeq	NM_002051.2	ILMN_6387	GATA3	NM_002051.2	NM_002051.2		2625	50541957	NM_002051.2	GATA3	NP_002042.1	ILMN_2406656	0005910719	A	2868	GCAGCCTGTGCTGAGGGTAGCAGTGTATGAGCTACCAGCGTGCATGTCAG	10	+	8116965-8117014	10p14d	Homo sapiens GATA binding protein 3 (GATA3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 1871134] [evidence TAS]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 7592673] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10935639] [evidence TAS]; Any process that activates or increases the frequency, rate, or extent of interleukin-4 production [goid 32753] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence IEA]; The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine [goid 42421] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics [goid 43627] [pmid 10037815] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; The process whose specific outcome is the progression of the sympathetic nervous system over time, from its formation to the mature structure. The sympathetic nervous system is one of the two divisions of the vertebrate autonomic nervous system (the other being the parasympathetic nervous system). The sympathetic preganglionic neurons have their cell bodies in the thoracic and lumbar regions of the spinal cord and connect to the paravertebral chain of sympathetic ganglia. Innervate heart and blood vessels, sweat glands, viscera and the adrenal medulla. Most sympathetic neurons, but not all, use noradrenaline as a post-ganglionic neurotransmitter [goid 48485] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8088776] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2050118] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15016828] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HDR; MGC5199; MGC5445; MGC2346	HDR; MGC5199; MGC5445; MGC2346
Homo sapiens	RefSeq	XR_039944.1	ILMN_343131	LOC283143	XR_039944.1	XR_039944.1		283143	169202094	XR_039944.1	LOC283143		ILMN_3285302	0001340187	M	3018	GGGCCCAGCCCCATCTTCAGTGGAAGGTCTAAAATTGGCCTTGCTTCCTT	11	-	115130424-115130473	11q23.2c	PREDICTED: Homo sapiens hypothetical protein LOC283143 (LOC283143), miscRNA.					
Homo sapiens	RefSeq	XM_931826.1	ILMN_33363	DDX12	XM_931826.1	XM_931826.1		440081	89035302	XM_931826.1	DDX12	XP_936919.1	ILMN_1760147	0002120039	I	1669	CAGGGCAGGAACCACGTCTTTACAGTTTGATGTTCCCAGAGCTGACCCAG	12	-	9479571-9479620	12p13.31a	PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 3 (DDX12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]		
Homo sapiens	RefSeq	NM_033514.1	ILMN_26870	LIMS3	NM_033514.1	NM_033514.1		96626	15743547	NM_033514.1	LIMS3	NP_277049.1	ILMN_1714880	0004540056	S	468	GGCCACTGGTGCTGAGTCAAAGGGAAAAGCTCAGAACAGCCTTGACAGCG	2	+	110020834-110020883	2q13b	Homo sapiens LIM and senescent cell antigen-like domains 3 (LIMS3), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC138438	MGC138438
Homo sapiens	RefSeq	NM_006464.2	ILMN_179291	TGOLN2	NM_006464.2	NM_006464.2		10618	42518067	NM_006464.2	TGOLN2	NP_006455.2	ILMN_1651735	0005700672	S	5975	GTATGTCAAACTGCCAGTAAGCCAGCCCCTCACCCTCTGATAGATATTCC	2	-	85545437-85545486	2p11.2g	Homo sapiens trans-golgi network protein 2 (TGOLN2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 9422759] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 9422759] [evidence TAS]			TGN51; MGC14722; TGN48; TGN38; TGN46; TTGN2	TGN51; MGC14722; TGN48; TGN38; TGN46; TTGN2
Homo sapiens	RefSeq	NM_006709.2	ILMN_18266	EHMT2	NM_006709.2	NM_006709.2		10919	18375636	NM_006709.2	EHMT2	NP_006700.2	ILMN_1700791	0004850609	I	1142	TCCTCAGGCCCCAGTGAGTACATGGAGGTCCCTCTGGGGTCCCTGGAGCT	6	-	31964759-31964808	6p21.32b	Homo sapiens euchromatic histone-lysine N-methyltransferase 2 (EHMT2), transcript variant NG36/G9a, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IEA]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IEA]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IEA]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IEA]; The union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy) [goid 9566] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8457211] [evidence NAS]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	NG36/G9a; C6orf30; BAT8; NG36; G9A; FLJ35547	NG36/G9a; C6orf30; BAT8; NG36; G9A; FLJ35547
Homo sapiens	RefSeq	NM_148964.1	ILMN_28743	CTSE	NM_148964.1	NM_148964.1		1510	23110951	NM_148964.1	CTSE	NP_683865.1	ILMN_2387224	0000650445	A	1105	CAGTTTTACTCAGTCTTTGACCGTGGGAATAACCGTGTGGGACTGGCCCC	1	+	204497746-204497795	1q32.1h	Homo sapiens cathepsin E (CTSE), transcript variant 2, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7983070] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 2674141] [evidence TAS]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [pmid 8765029] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 7789521] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	CATE	CATE
Homo sapiens	RefSeq	NM_015679.1	ILMN_7446	TRUB2	NM_015679.1	NM_015679.1		26995	7661555	NM_015679.1	TRUB2	NP_056494.1	ILMN_2116075	0005690121	S	1018	GCTCCTGGGGCAGTGGATGGATAAATAGAAGAACTGCTATGAGCTGGACC	9	-	131071767-131071816	9q34.11b	Homo sapiens TruB pseudouridine (psi) synthase homolog 2 (E. coli) (TRUB2), mRNA.		The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	RP11-339B21.1; CLONE24922	RP11-339B21.1; CLONE24922
Homo sapiens	RefSeq	XM_938002.1	ILMN_31645	LOC648926	XM_938002.1	XM_938002.1		648926	89060768	XM_938002.1	LOC648926	XP_943095.1	ILMN_1682493	0001230750	S	55	TGGGGCTCAGAAGAGTTGAAGCAGAGCCCACAAGAAACACTGCCAGGCCT				Xp11.22c	PREDICTED: Homo sapiens similar to Melanoma-associated antigen 1 (MAGE-1 antigen) (Antigen MZ2-E) (LOC648926), mRNA.					
Homo sapiens	RefSeq	XR_017149.2	ILMN_169587	LOC392437	XR_017149.2	XR_017149.2		392437	169216819	XR_017149.2	LOC392437		ILMN_3288717	0002750685	M	82	GAAAATTATCCTGAATTGCTGCTCGGCGGTCCCACGGGTCTGTCTCTTGC	X	+	30558118-30558167	Xp21.2a	PREDICTED: Homo sapiens misc_RNA (LOC392437), miscRNA.					
Homo sapiens	RefSeq	NM_032444.2	ILMN_23717	BTBD12	NM_032444.2	NM_032444.2		84464	63252862	NM_032444.2	BTBD12	NP_115820.2	ILMN_1732885	0002120341	S	7144	CTCCAGCCTCAGGAGCAGTGTGGAGGAAGATGAGGGCCAGGAAAGAAGGA	16	-	3631281-3631330	16p13.3c	Homo sapiens BTB (POZ) domain containing 12 (BTBD12), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1987; KIAA1784	KIAA1987; KIAA1784
Homo sapiens	RefSeq	NM_016953.2	ILMN_178723	PDE11A	NM_016953.3	NM_016953.3		50940	116536084	NM_016953.3	PDE11A	NP_058649.3	ILMN_1813325	0002510632	S	3867	GTAAGGGTGGAAGGAAATCTGTAGCTGGATTTACCACAAGTGACATCTAG	2	-	178565883-178565932	2q31.2a-q31.2b	Homo sapiens phosphodiesterase 11A (PDE11A), transcript variant 4, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10725373] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]	MGC133356; MGC133355; FLJ23693; PPNAD2	PDE11A1
Homo sapiens	RefSeq	NM_016953.3	ILMN_178723	PDE11A	NM_016953.3	NM_016953.3		50940	116536084	NM_016953.3	PDE11A	NP_058649.3	ILMN_2278246	0006860670	I	1003	GTCTGCCTTATGGTGGATGCTGACCGCTGCTCTCTTTTCCTGGTGGAAGG	2	-	178936430-178936479	2q31.2a-q31.2b	Homo sapiens phosphodiesterase 11A (PDE11A), transcript variant 4, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10725373] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]	MGC133356; MGC133355; FLJ23693; PPNAD2	MGC133355; MGC133356; FLJ23693; PPNAD2
Homo sapiens	RefSeq	XM_001725351.1	ILMN_346917	LOC100130494	XM_001725351.1	XM_001725351.1		100130494	169161259	XM_001725351.1	LOC100130494	XP_001725403.1	ILMN_3266764	0003130341	M	1381	AAGGGGGAACCTGGAAGGACCACTGTCTTCTTATAGCCCTTCAGACCCCC	1	-	39763502-39763551	1p34.2d	PREDICTED: Homo sapiens hypothetical protein LOC100130494 (LOC100130494), mRNA.					
Homo sapiens	RefSeq	NM_014358.1	ILMN_41474	CLEC4E	NM_014358.2	NM_014358.2		26253	90577173	NM_014358.2	CLEC4E	NP_055173.1	ILMN_1771664	0005690753	S	1426	GGCTGTAACCAAGTCCACCCATCCCTGGGGCTTCCTTTGCTCTGCCTTAT	12	-	8686583-8686632	12p13.31b	Homo sapiens C-type lectin domain family 4, member E (CLEC4E), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 10528209] [evidence TAS]	CLECSF9; MINCLE	CLECSF9; MINCLE
Homo sapiens	RefSeq	NM_182903.2	ILMN_24521	KIF9	NM_182903.2	NM_182903.2		64147	33620743	NM_182903.2	KIF9	NP_878906.1	ILMN_2327186	0003190370	A	1886	AGGGCCAGCGAGACCACACAGCACATCAATGCCATCAAGCGGGAGATTGA	3	-	47257344-47257393	3p21.31g	Homo sapiens kinesin family member 9 (KIF9), transcript variant 3, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC104186	MGC104186
Homo sapiens	RefSeq	NM_032404.1	ILMN_30158	TMPRSS3	NM_032404.1	NM_032404.1		64699	14602454	NM_032404.1	TMPRSS3	NP_115780.1	ILMN_1700475	0006480408	I	1	GCAGGGGGACAGTTGTTAGTGTTGCACTCTGAAAGAGCTGTTGGTTAATT	21	-	42682246-42682295	21q22.3b	Homo sapiens transmembrane protease, serine 3 (TMPRSS3), transcript variant C, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16780588] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 12393794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11137999] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11068177] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 11068177] [evidence NAS]; The regulation of the levels, transport, and metabolism of sodium ions within a cell or between a cell and its external environment [goid 6883] [pmid 12393794] [evidence IDA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11137999] [evidence NAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11068177] [evidence NAS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA];  [goid 17080] [pmid 12393794] [evidence IDA]	ECHOS1; DFNB10; DFNB8; TADG12	ECHOS1; DFNB10; DFNB8; TADG12
Homo sapiens	RefSeq	NM_183394.1	ILMN_18905	CADPS	NM_183394.1	NM_183394.1		8618	34452712	NM_183394.1	CADPS	NP_899631.1	ILMN_1809972	0000450681	I	2939	GAGAGAAATGTATGAGCATCCTGTCTTCTGCTTGGCCTCCCAAGTGATGG	3	-	62474364-62474413	3p14.2b-p14.2a	Homo sapiens Ca2+-dependent secretion activator (CADPS), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1516133] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 1516133] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	KIAA1121; CAPS; CAPS1	KIAA1121; CAPS; CAPS1
Homo sapiens	RefSeq	NM_001012716.1	ILMN_21911	C18ORF56	NM_001012716.1	NM_001012716.1		494514	60593053	NM_001012716.1	C18orf56	NP_001012734.1	ILMN_1796074	0001450682	S	763	CGTCACAGCTTTCCTGGGTTGTTGAGCCTCTAAGATGGTCTTTTCCTCTG	18	-	649651-649700	18p11.32c	Homo sapiens chromosome 18 open reading frame 56 (C18orf56), mRNA.					
Homo sapiens	RefSeq	NM_006255.3	ILMN_11204	PRKCH	NM_006255.3	NM_006255.3		5583	47717140	NM_006255.3	PRKCH	NP_006246.2	ILMN_1780898	0003290731	S	3172	AGAAGGGTCACTGCCACAACAGCACAGTCAGCGGGTGAATTACAGGTGCC	14	+	61087117-61087166	14q23.1c	Homo sapiens protein kinase C, eta (PRKCH), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 1986216] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [pmid 1986216] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PRKCL; MGC26269; nPKC-eta; PKCL; MGC5363; PKC-L	PRKCL; MGC26269; nPKC-eta; PKCL; MGC5363; PKC-L
Homo sapiens	RefSeq	NM_003748.2	ILMN_175664	ALDH4A1	NM_003748.2	NM_003748.2		8659	25777733	NM_003748.2	ALDH4A1	NP_003739.2	ILMN_2244841	0000160343	I	2564	TCTGGGATTTCCCTGCAGGAGCTCAGCCACCACTGTGCCATGGTGACACA	1	-	19071059-19071108	1p36.13b	Homo sapiens aldehyde dehydrogenase 4 family, member A1 (ALDH4A1), nuclear gene encoding mitochondrial protein, transcript variant P5CDhL, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8621661] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [pmid 8621661] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 1-pyrroline-5-carboxylate + NAD+ + H2O = L-glutamate + NADH + H+ [goid 3842] [pmid 8621661] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [pmid 8621661] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8621661] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	P5CDh; P5CD; ALDH4; P5CDhL; P5CDhS	P5CDh; P5CD; ALDH4; P5CDhL; P5CDhS
Homo sapiens	RefSeq	XM_001720181.1	ILMN_335916	LOC100131131	XM_001720181.1	XM_001720181.1		100131131	169163840	XM_001720181.1	LOC100131131	XP_001720233.1	ILMN_3200261	0007400022	A	220	CCTCGGTGCCTAGGAATTCTTGTCAGCTTCCTCCGCTTTGCCAGAGGCAG				2q12.1a	PREDICTED: Homo sapiens similar to AHPA9419 (LOC100131131), mRNA.					
Homo sapiens	RefSeq	NM_194277.1	ILMN_8097	FRMD7	NM_194277.1	NM_194277.1		90167	34915999	NM_194277.1	FRMD7	NP_919253.1	ILMN_1792419	0003930156	S	2847	GCCCTCCTACAGCCTCAGGAAGGAGGTGGTGGCATAGATCCTCTCAAGAG	X	-	131039007-131039056	Xq26.2a	Homo sapiens FERM domain containing 7 (FRMD7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	RP6-213H19.2; FLJ43346; NYS1; NYS	RP6-213H19.2; FLJ43346; NYS1; NYS
Homo sapiens	RefSeq	NM_171998.2	ILMN_22924	RAB39B	NM_171998.2	NM_171998.2		116442	64762487	NM_171998.2	RAB39B	NP_741995.1	ILMN_1811889	0000270010	S	3079	TCTGGCAGGTTTAAAAATATTCAGCATAAATCCAGCAGAGGTGGCTGAGC	X	-	154487880-154487929	Xq28h	Homo sapiens RAB39B, member RAS oncogene family (RAB39B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_004835.3	ILMN_17269	AGTR1	NM_004835.3	NM_004835.3		185	122939143	NM_004835.3	AGTR1	NP_004826.2	ILMN_2341343	0000940040	A	1813	GCAACAGGAGATGAGAGTTCCAGATTGTTCTGTCCAGTTTCCAAAGGGCA	3	+	148460273-148460322	3q24f	Homo sapiens angiotensin II receptor, type 1 (AGTR1), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1378723] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 17159080] [evidence NAS]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [pmid 16116425] [evidence IMP]; The process by which an increase in active angiotensin stimulates the adrenal cortices to secrete aldosterone [goid 2018] [pmid 17159080] [evidence NAS]; The process where the diameter of a blood vessel is changed due to activity of the renin-angiotensin system [goid 2034] [pmid 10993080] [evidence IC ]; Any process that modulates the frequency, rate, or extent of natriuresis, the process of renal sodium excretion [goid 3078] [pmid 17159080] [evidence NAS]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [pmid 17159080] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 17159080] [evidence NAS]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 15117835] [evidence IDA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 1378723] [evidence IC ]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 1567413] [evidence IDA]; Any process that activates or increases the activity of the enzyme NAD(P)H oxidase [goid 33864] [pmid 17159080] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 17159080] [evidence NAS]; Any process that modulates the frequency, rate or extent of increases in the diameter of blood vessels [goid 42312] [pmid 1378723] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [pmid 17159080] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [pmid 1567413] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA];  [goid 1596] [pmid 1378723] [evidence IPI];  [goid 1596] [pmid 10993080] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [pmid 8135787] [evidence NAS]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]; Interacting selectively with a bradykinin receptor [goid 31711] [pmid 10993080] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10993080] [evidence IPI]	AT2R1A; AT2R1B; AT2R1; AT1; AT1B; AGTR1B; AGTR1A; AG2S; HAT1R	AT2R1A; AT2R1B; AT2R1; AT1; AT1B; AGTR1B; AGTR1A; AG2S; HAT1R
Homo sapiens	RefSeq	NM_000177.3	ILMN_139222	GSN	NM_000177.3	NM_000177.3		2934	38016941	NM_000177.3	GSN	NP_000168.1	ILMN_1787518	0003940204	I	16	TGCCGACTGGGTCCCCTGCCGCTGTCGCCACCATGGCTCCGCACCGCCCC	9	+	123101929-123101960:123101961-123101978	9q33.2a	Homo sapiens gelsolin (amyloidosis, Finnish type) (GSN), transcript variant 1, mRNA.	A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3020431] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 3020431] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 1321812] [evidence TAS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [pmid 3020431] [evidence IDA]; The process by which an actin filament is broken down into smaller filaments [goid 51014] [pmid 3020431] [evidence IDA]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [pmid 1321812] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10793131] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 1321812] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17373842] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12732734] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DKFZp313L0718	DKFZp313L0718
Homo sapiens	RefSeq	NM_145038.1	ILMN_16191	C2ORF39	NM_145038.1	NM_145038.1		92749	21450776	NM_145038.1	C2orf39	NP_659475.1	ILMN_1687445	0001710717	S	2118	ACAGCCTTGGAGAAGTACCACCTTGTCCTGACCCAGAGGGCCAAGCTGCT	2	+	26531143-26531162:26531503-26531532	2p23.3b	Homo sapiens chromosome 2 open reading frame 39 (C2orf39), mRNA.				FLJ32660; MGC16372	FLJ32660; MGC16372
Homo sapiens	Unigene	Hs.499716	ILMN_97098	HS.499716	Hs.499716		Hs.499716		51474147	XM_378646			ILMN_1889555	0006590113	S	1289	AACTGTACGAGGGTCAGGAAGAAGGCTGCGGGGATGAATGGCTCTACCGG					PREDICTED: Homo sapiens hypothetical LOC400571 (LOC400571), mRNA					
Homo sapiens	Unigene	Hs.440088	ILMN_92216	HS.440088	Hs.440088		Hs.440088		46844424	BX393727			ILMN_1816713	0003060239	S	653	TCCAAGTTGGTGATGGGTAGTGCGGGGAGTTGAGTCAGATAAACTACCAG	5	-	114572215-114572264		BX393727 Homo sapiens NEUROBLASTOMA COT 25-NORMALIZED Homo sapiens cDNA clone CS0DC001YP02 5-PRIME, mRNA sequence					
Homo sapiens	RefSeq	XM_001715815.1	ILMN_338879	LOC100132891	XM_001715815.1	XM_001715815.1		100132891	169173100	XM_001715815.1	LOC100132891	XP_001715867.1	ILMN_3280416	0004070110	M	997	TGTCGTTGGAAACCACTGGGCCACAGGAAAGGCAGGCTCTCTCAGTCCTG	8	+	73037803-73037837:73040198-73040212	8q13.3c	PREDICTED: Homo sapiens hypothetical protein LOC100132891 (LOC100132891), mRNA.					
Homo sapiens	RefSeq	XM_001715815.1	ILMN_338879	LOC100132891	XM_001715815.1	XM_001715815.1		100132891	169173100	XM_001715815.1	LOC100132891	XP_001715867.1	ILMN_3203916	0000630242	A	431	TCACGGGCGTTGGCCGCGTTCCGCTCCTTCCGCGCTGCCGGCTGTGCCCA	8	+	72918621-72918645:72918762-72918786	8q13.3c	PREDICTED: Homo sapiens hypothetical protein LOC100132891 (LOC100132891), mRNA.					
Homo sapiens	RefSeq	NM_138471.1	ILMN_20409	C11ORF84	NM_138471.1	NM_138471.1		144097	39930522	NM_138471.1	C11orf84	NP_612480.1	ILMN_1795564	0005420438	S	1727	CACAAGAGTGGTCATAAGGGGGTTTGAACTGAGTCCCACTACCTCGGGGG	11	+	63351532-63351581	11q13.1a	Homo sapiens chromosome 11 open reading frame 84 (C11orf84), mRNA.				DKFZp762N0114	DKFZp762N0114
Homo sapiens	RefSeq	XM_927490.1	ILMN_40183	LOC644325	XM_927490.1	XM_927490.1		644325	88978332	XM_927490.1	LOC644325	XP_932583.1	ILMN_1654346	0001570093	S	260	GCCGAGAGTGGAAGCCTCCTGACTGCCTGAGAGAAGGCACTGAGGGTAGT	4	-	188904347-188904396	4q35.2b	PREDICTED: Homo sapiens similar to ADAM 25 precursor (A disintegrin and metalloproteinase domain 25) (Testase 2) (LOC644325), mRNA.					
Homo sapiens	RefSeq	NM_199418.1	ILMN_174053	PRCP	NM_199418.2	NM_199418.2		5547	117306168	NM_199418.2	PRCP	NP_955450.2	ILMN_1769091	0001660300	A	2091	TGTAATTGCAGCTGGTAGGATGTCTGGTGCCAATCCAGGAAGTGAGAGCC	11	-	82535474-82535523	11q14.1d	Homo sapiens prolylcarboxypeptidase (angiotensinase C) (PRCP), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4185] [pmid 28321] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	HUMPCP; PCP; MGC2202	HUMPCP; PCP; MGC2202
Homo sapiens	RefSeq	NM_003095.1	ILMN_138252	SNRPF	NM_003095.1	NM_003095.1		6636	4507130	NM_003095.1	SNRPF	NP_003086.1	ILMN_1678966	0000460114	S	87	GTAGCCTGCAACATTCGGCCGTGGTTTACATGAGTTTACCCCTCAATCCC	12	+	94776956-94776982:94776983-94776985:94779077-94779096	12q22d	Homo sapiens small nuclear ribonucleoprotein polypeptide F (SNRPF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 7744013] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 11991638] [evidence IDA]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 7744013] [evidence IMP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7744013] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	SMF	SMF
Homo sapiens	RefSeq	NM_001024466.1	ILMN_20239	SOD2	NM_001024466.1	NM_001024466.1		6648	67782308	NM_001024466.1	SOD2	NP_001019637.1	ILMN_2406501	0003420373	A	251	TACGACTACGGCGCCCTGGAACCTCACATCAACGCGCAGATCATGCAGCT	6	-	160113772-160113821	6q25.3f	Homo sapiens superoxide dismutase 2, mitochondrial (SOD2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15087454] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [pmid 9462746] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1315] [pmid 14980699] [evidence IMP]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9393747] [evidence IMP]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [pmid 14980699] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 9462746] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1315] [evidence ISS]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [pmid 14980699] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MNSOD; IPO-B; Mn-SOD	MNSOD; IPO-B; Mn-SOD
Homo sapiens	RefSeq	NM_024581.3	ILMN_1091	FAM184A	NM_024581.4	NM_024581.4		79632	154350225	NM_024581.4	FAM184A	NP_078857.5	ILMN_1696699	0004490333	S	3718	GCTTCTCCAGATCCCCAGCGCCAGGAGTGGTTTGCCCGGTACTTCACATT	6	-	119345154-119345203	6q22.31a	Homo sapiens family with sequence similarity 184, member A (FAM184A), transcript variant 1, mRNA.				FLJ13942	FLJ13942
Homo sapiens	RefSeq	NM_006642.1	ILMN_24496	SDCCAG8	NM_006642.2	NM_006642.2		10806	110347421	NM_006642.2	SDCCAG8	NP_006633.1	ILMN_1728802	0000460458	S	1730	CAGAACTGCTGGGCGAATCTGAGCACCAACTGCACCTCACCAGACAGGAA	1	+	241608746-241608788:241645627-241645633	1q43f-q44a	Homo sapiens serologically defined colon cancer antigen 8 (SDCCAG8), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]			HSPC085; NY-CO-8; CCCAP	NY-CO-8; CCCAP; HSPC085
Homo sapiens	Unigene	Hs.539160	ILMN_104344	HS.539160	Hs.539160		Hs.539160		1448246	AA004709			ILMN_1874273	0001230221	S	195	GTATCACGAAGGGCTCTGTGCAGAGGTGACGTTTAAAGCTGAGAAGTAGG					zh93f04.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:428863 3, mRNA sequence					
Homo sapiens	RefSeq	XM_934651.1	ILMN_46177	LOC653596	XM_934651.1	XM_934651.1		653596	88953511	XM_934651.1	LOC653596	XP_939744.1	ILMN_1672987	0001940753	I	6518	GGATTTTTATCCTGGGGTTGAGTTCTGGTGTTCAGCTGAACGTGGTTTTG	2	-	110715306-110715355		PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 11 (LOC653596), mRNA.					
Homo sapiens	RefSeq	NM_015721.1	ILMN_15971	GEMIN4	NM_015721.2	NM_015721.2		50628	122939156	NM_015721.2	GEMIN4	NP_056536.2	ILMN_1770206	0006450300	S	3348	GCTTCTTACCTGTGCGGGAGCGAAAAAGCTGGGCTTCAACATGGCAGGTC	17	-	648004-648053	17p13.3f	Homo sapiens gem (nuclear organelle) associated protein 4 (GEMIN4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10725331] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10725331] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 10725331] [evidence TAS]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [pmid 10725331] [evidence TAS]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]	HC56; p97; DKFZP434B131; DKFZP434D174; HHRF-1; HCAP1	HC56; DKFZP434B131; DKFZP434D174; HHRF-1
Homo sapiens	RefSeq	XR_037138.1	ILMN_335274	LOC100128689	XR_037138.1	XR_037138.1		100128689	169173035	XR_037138.1	LOC100128689		ILMN_3176954	0003800138	A	188	CAGAAGAATACTCAATGGCAGCCCCTACAGTAACTGGTCCCCAGCACTGC	8	-	48667421-48667442:48667516-48667543	8q11.21a	PREDICTED: Homo sapiens misc_RNA (LOC100128689), miscRNA.					
Homo sapiens	RefSeq	XM_932676.1	ILMN_34931	LOC645367	XM_932676.1	XM_932676.1		645367	89058765	XM_932676.1	LOC645367	XP_937769.1	ILMN_1748309	0004260110	I	2033	CGTGTCGACCTTTACCACTGAGGCTGGAAATTGGCATGCCAATACCCTGT	22	-	19899634-19899683	2p11.1d	PREDICTED: Homo sapiens similar to Gamma-glutamyltranspeptidase 1 precursor (Gamma-glutamyltransferase 1) (CD224 antigen), transcript variant 3 (LOC645367), mRNA.					
Homo sapiens	RefSeq	XM_001715053.1	ILMN_340051	LOC100128328	XM_001715053.1	XM_001715053.1		100128328	169216358	XM_001715053.1	LOC100128328	XP_001715105.1	ILMN_3258951	0000050561	M	1544	CCTGCGCTGTTCTGCGCCTGTCGCCGAGGTCGGTCAGCCGCTGCTGGCAT				Xq22.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128328 (LOC100128328), mRNA.					
Homo sapiens	RefSeq	XM_943541.1	ILMN_40161	LOC344595	XM_943541.1	XM_943541.1		344595	88970838	XM_943541.1	LOC344595	XP_948634.1	ILMN_1686463	0007510445	I	568	GTGAGTCTGTCTGAGCTCTGGCTCCTAGCCTCAAAACTACCCATGAAGGG				3q13.12a	PREDICTED: Homo sapiens hypothetical LOC344595 (LOC344595), mRNA.					
Homo sapiens	RefSeq	NM_199077.1	ILMN_10168	CNNM2	NM_199077.1	NM_199077.1		54805	40068050	NM_199077.1	CNNM2	NP_951059.1	ILMN_1754752	0006620184	I	1841	AGGATGTCTATACAGAGGGATAAAAAGGGGTGGCAGTTGGCTGGGCGTGG	10	+	104677187-104677236	10q24.32b	Homo sapiens cyclin M2 (CNNM2), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]		ACDP2	ACDP2
Homo sapiens	RefSeq	NM_199077.1	ILMN_10168	CNNM2	NM_199077.1	NM_199077.1		54805	40068050	NM_199077.1	CNNM2	NP_951059.1	ILMN_1663975	0004060730	A	1585	GCGCTCCAATATCGTGGACCTGCTGTTTGTCAAAGACTTGGCCTTCGTGG	10	+	104669688-104669737	10q24.32b	Homo sapiens cyclin M2 (CNNM2), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]		ACDP2	ACDP2
Homo sapiens	RefSeq	XM_001128895.1	ILMN_181873	LOC731231	XM_001128895.1	XM_001128895.1		731231	113431135	XM_001128895.1	LOC731231	XP_001128895.1	ILMN_3245287	0001410270	S	103	CCGCCCTACTGCGACCCCACTCTGCCCAACAGCAATGGCTCTCGGGGGGA					PREDICTED: Homo sapiens similar to sodium channel protein type V alpha subunit (LOC731231), mRNA.					
Homo sapiens	RefSeq	NM_001033032.1	ILMN_29507	FAIM	NM_001033032.1	NM_001033032.1		55179	74271889	NM_001033032.1	FAIM	NP_001028204.1	ILMN_2351548	0000150747	A	622	GGTGCAATGGTAAAAAATTGGAGACAGCGGGTGAGTTTGTAGATGATGGG	3	+	138347970-138347998:138351772-138351792	3q22.3c	Homo sapiens Fas apoptotic inhibitory molecule (FAIM), transcript variant 3, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]		FAIM1	FAIM1
Homo sapiens	RefSeq	NM_001078177.1	ILMN_164287	SLC29A1	NM_001078177.1	NM_001078177.1		2030	118582266	NM_001078177.1	SLC29A1	NP_001071645.1	ILMN_2279377	0001990474	I	278	ACGTTGACCTCCGCAAGGGGCAGGCGAGTGGACGGGTGATCCCCATCGAT	6	+	44191640-44191689	6p21.1b	Homo sapiens solute carrier family 29 (nucleoside transporters), member 1 (SLC29A1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8986748] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8986748] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 8986748] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), into, out of, within or between cells [goid 15858] [pmid 8986748] [evidence TAS]	Catalysis of the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other [goid 5337] [pmid 8986748] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	MGC3778; MGC1465; ENT1	MGC3778; MGC1465; ENT1
Homo sapiens	RefSeq	XM_932181.1	ILMN_37884	LOC644431	XM_932181.1	XM_932181.1		644431	89060471	XM_932181.1	LOC644431	XP_937274.1	ILMN_1770698	0004610307	S	371	CGCCCCGGCCGCACGCCAATCACCACCACGTGACAAGGGATGACCAATGA	X	+	13844-13893		PREDICTED: Homo sapiens hypothetical LOC644431 (LOC644431), mRNA.					
Homo sapiens	RefSeq	NM_198450.1	ILMN_23257	APOOL	NM_198450.3	NM_198450.3		139322	116812609	NM_198450.3	APOOL	NP_940852.3	ILMN_1777483	0005090093	S	730	CAGGTGCAACCCAGTTTATGCCTGACCCCAAGCTCATGGATCACGGGCAG	X	+	84216051-84216053:84229252-84229298	Xq21.1e	Homo sapiens apolipoprotein O-like (APOOL), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]			MGC129748; UNQ8193; FAM121A; CXorf33	MGC129748; UNQ8193
Homo sapiens	RefSeq	NM_001706.2	ILMN_540	BCL6	NM_001706.2	NM_001706.2		604	21040323	NM_001706.2	BCL6	NP_001697.2	ILMN_1737314	0006280458	A	3306	ATGGGCGAGCGTGCACCATCCCTTTTTGAAGTGTAGGCAGACACAGGGAC	3	-	188922032-188922081	3q27.3c	Homo sapiens B-cell CLL/lymphoma 6 (zinc finger protein 51) (BCL6), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10898795] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [pmid 10490843] [evidence IDA]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [pmid 11821949] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 15577913] [evidence IDA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [evidence IEA]; Any process that modulates the frequency, rate, or extent of germinal center formation [goid 2634] [pmid 7795255] [evidence NAS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a T-helper 2 type immune response [goid 2829] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptosis [goid 2903] [pmid 15577913] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 15577913] [evidence IDA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 10490843] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rho family [goid 32319] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell cytokine production [goid 32764] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Rho protein signal transduction [goid 35024] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 10490843] [evidence IDA]; Any process that modulates the frequency, rate, or extent of memory T cell differentiation [goid 43380] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of S phase of mitotic cell cycle activity [goid 45749] [pmid 10490843] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of isotype switching to IgE isotypes [goid 48294] [evidence IEA]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IEA]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [evidence IEA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [pmid 16455075] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the movement of a cell [goid 51272] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 12097386] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16819511] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10898795] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 15577913] [evidence IMP]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 9135990] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 15577913] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZBTB27; ZNF51; LAZ3; BCL6A; BCL5	ZBTB27; ZNF51; LAZ3; BCL6A; BCL5
Homo sapiens	RefSeq	NM_019846.3	ILMN_1615	CCL28	NM_019846.3	NM_019846.3		56477	22538809	NM_019846.3	CCL28	NP_062820.1	ILMN_1701347	0007100762	A	1188	ATTCAATCTCCCTTACCCTGACCAATCAGTGGCCCAAATTTTCCAGCCCC	5	-	43412603-43412652	5p12c	Homo sapiens chemokine (C-C motif) ligand 28 (CCL28), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10781587] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10781587] [evidence TAS]	MEC; SCYA28; CCK1; MGC71902	MEC; SCYA28; CCK1; MGC71902
Homo sapiens	RefSeq	NM_019846.3	ILMN_1615	CCL28	NM_019846.3	NM_019846.3		56477	22538809	NM_019846.3	CCL28	NP_062820.1	ILMN_1774087	0004640050	I	936	GGTCACTTTGCTTGCTGACCCCTTCCTCATAGTTGTTTGGCTATTGCTTC	5	-	43412855-43412904	5p12c	Homo sapiens chemokine (C-C motif) ligand 28 (CCL28), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10781587] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10781587] [evidence TAS]	MEC; SCYA28; CCK1; MGC71902	MEC; SCYA28; CCK1; MGC71902
Homo sapiens	RefSeq	NM_005516.4	ILMN_2073	HLA-E	NM_005516.4	NM_005516.4		3133	62912478	NM_005516.4	HLA-E	NP_005507.3	ILMN_1765258	0001030747	S	1290	AACAGTCCACCTCTGTGTCTACCATGACCCCCTTCCTCACACTGACCTGT	6	+	30460698-30460747	6p21.33b	Homo sapiens major histocompatibility complex, class I, E (HLA-E), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11513152] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 3260916] [evidence TAS]	DKFZp686P19218; EA2.1; MHC; HLA-6.2; EA1.2	DKFZp686P19218; EA2.1; MHC; HLA-6.2; EA1.2
Homo sapiens	RefSeq	NM_021129.2	ILMN_26474	PPA1	NM_021129.3	NM_021129.3		5464	78482607	NM_021129.3	PPA1	NP_066952.1	ILMN_1805827	0004050452	S	852	GAGAGCCCCTTCAAGTGTGATCCTGATGCTGCCAGAGCCATTGTGGATGC	10	-	71966020-71966069	10q22.1a	Homo sapiens pyrophosphatase (inorganic) 1 (PPA1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 4130389] [evidence EXP]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [evidence IEA]; The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 10542310] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [pmid 10542310] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PP1; IOPPP; MGC111556; PP; SID6-8061	PP1; SID6-8061; IOPPP; PP; PPase
Homo sapiens	RefSeq	XM_927138.1	ILMN_45732	LOC643868	XM_927138.1	XM_927138.1		643868	89057902	XM_927138.1	LOC643868	XP_932231.1	ILMN_1667124	0005870142	S	255	GGTAGAAGTTAGGGACCATGGCCGCTCAGCCTCTGCAGGAAAATGGATTA	20	-	44812654-44812662:44812663-44812703		PREDICTED: Homo sapiens hypothetical protein LOC643868 (LOC643868), mRNA.					
Homo sapiens	RefSeq	NM_016818.2	ILMN_17587	ABCG1	NM_016818.2	NM_016818.2		9619	46592897	NM_016818.2	ABCG1	NP_058198.2	ILMN_2329927	0005860377	A	2214	ATCCAACCCCTAGAACCGCGTTGGGTTTGTGGGTGTCTCGTGCTCAGCCA	21	+	42589678-42589727	21q22.3b	Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 1 (ABCG1), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 16780588] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16780588] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11500512] [evidence IC ]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 15994327] [evidence IDA]; The series of events in which a hormone stimulus is received by a cell and converted into a molecular signal [goid 9720] [pmid 11500512] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [pmid 11500512] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells [goid 32367] [pmid 15994327] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [pmid 15994327] [evidence IDA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [pmid 16702602] [evidence IMP]; The directed movement of a glycoprotein, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid, into, out of, within or between cells [goid 34436] [pmid 17293612] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 15994327] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [pmid 17293612] [evidence IDA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IEA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence ISS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol [goid 45542] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol [goid 45542] [evidence ISS]; Any process involved in the maintenance of an internal equilibrium of phospholipid within an organism or cell [goid 55091] [pmid 16702602] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 16702602] [evidence IC ]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [pmid 16702602] [evidence IDA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [pmid 15994327] [evidence IC ]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [pmid 15994327] [evidence IDA]; Enables the directed movement of a toxin into, out of, within or between cells. A toxin is a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 19534] [pmid 17408620] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + sterol(in) = ADP + phosphate + sterol(out) [goid 34041] [pmid 17408620] [evidence IDA]; Enables the directed movement of a glycoprotein, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid, into, out of, within or between cells [goid 34437] [pmid 17293612] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16870176] [evidence IDA]; Interacting selectively with ADP, adenosine 5'-diphosphate [goid 43531] [pmid 16702602] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16870176] [evidence IPI]	WHITE1; ABC8; MGC34313	WHITE1; ABC8; MGC34313
Homo sapiens	RefSeq	NM_004915.3	ILMN_17587	ABCG1	NM_016818.2	NM_016818.2		9619	46592897	NM_016818.2	ABCG1	NP_058198.2	ILMN_1794782	0006060377	A	2769	CAGCACTTGTGAAGGATTGAATGCAGGTTCCAGGTGGAGGGAAGACGTGG	21	+	42590233-42590282	21q22.3b	Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 1 (ABCG1), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 16780588] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16780588] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11500512] [evidence IC ]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 15994327] [evidence IDA]; The series of events in which a hormone stimulus is received by a cell and converted into a molecular signal [goid 9720] [pmid 11500512] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [pmid 11500512] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells [goid 32367] [pmid 15994327] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [pmid 15994327] [evidence IDA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [pmid 16702602] [evidence IMP]; The directed movement of a glycoprotein, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid, into, out of, within or between cells [goid 34436] [pmid 17293612] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 15994327] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [pmid 17293612] [evidence IDA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IEA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence ISS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol [goid 45542] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol [goid 45542] [evidence ISS]; Any process involved in the maintenance of an internal equilibrium of phospholipid within an organism or cell [goid 55091] [pmid 16702602] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 16702602] [evidence IC ]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [pmid 16702602] [evidence IDA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [pmid 15994327] [evidence IC ]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [pmid 15994327] [evidence IDA]; Enables the directed movement of a toxin into, out of, within or between cells. A toxin is a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 19534] [pmid 17408620] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + sterol(in) = ADP + phosphate + sterol(out) [goid 34041] [pmid 17408620] [evidence IDA]; Enables the directed movement of a glycoprotein, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid, into, out of, within or between cells [goid 34437] [pmid 17293612] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16870176] [evidence IDA]; Interacting selectively with ADP, adenosine 5'-diphosphate [goid 43531] [pmid 16702602] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16870176] [evidence IPI]	WHITE1; ABC8; MGC34313	WHITE1; ABC8; MGC34313
Homo sapiens	RefSeq	NM_020844.1	ILMN_175576	C8ORF79	NM_020844.2	NM_020844.2		57604	153251912	NM_020844.2	C8orf79	NP_065895.2	ILMN_1801178	0003940632	S	5914	GTGAGCCCCCAGTTTTGGAGGAAGGAGGAAATGGGAACCAACCACCAGAC	8	+	12883317-12883366	8p22e	Homo sapiens chromosome 8 open reading frame 79 (C8orf79), transcript variant 1, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC43113; KIAA1456; FLJ36980	
Homo sapiens	RefSeq	NM_001009568.1	ILMN_26674	SMPDL3B	NM_001009568.1	NM_001009568.1		27293	57242799	NM_001009568.1	SMPDL3B	NP_001009568.1	ILMN_1719660	0002000685	I	1512	TTCATCTTGTCTCCGTCCTGCTCAAAAACCTTCAGTGGCTCCCCAGTGCC	1	+	28155496-28155545	1p35.3b	Homo sapiens sphingomyelin phosphodiesterase, acid-like 3B (SMPDL3B), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ASML3B	ASML3B
Homo sapiens	RefSeq	NM_000243.1	ILMN_164970	MEFV	NM_000243.1	NM_000243.1		4210	4557742	NM_000243.1	MEFV	NP_000234.1	ILMN_2115752	0003390687	S	3433	GAGCCACCATGCCTGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATG	16	-	3232045-3232094	16p13.3c	Homo sapiens Mediterranean fever (MEFV), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11115844] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 11468188] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 11468188] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11468188] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11115844] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MEF; TRIM20; MGC126586; FMF; MGC126560	MEF; MGC126560; TRIM20; MGC126586; FMF
Homo sapiens	RefSeq	NM_000243.1	ILMN_164970	MEFV	NM_000243.1	NM_000243.1		4210	4557742	NM_000243.1	MEFV	NP_000234.1	ILMN_1804738	0000020451	S	2752	GTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGGA	16	-	3232726-3232775	16p13.3c	Homo sapiens Mediterranean fever (MEFV), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11115844] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 11468188] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 11468188] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11468188] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11115844] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MEF; TRIM20; MGC126586; FMF; MGC126560	MEF; MGC126560; TRIM20; MGC126586; FMF
Homo sapiens	RefSeq	XM_001129390.1	ILMN_179608	LOC728774	XM_001129390.1	XM_001129390.1		728774	113420095	XM_001129390.1	LOC728774	XP_001129390.1	ILMN_3298266	0003610152	M	189	CCTCACAGGCAGGCTAAACAAATATGGAGTGATCAGCCCCAGGTTTCATG	8	-	69600457-69600506	8q13.2b	PREDICTED: Homo sapiens similar to hCG1994130 (LOC728774), mRNA.					
Homo sapiens	RefSeq	NM_013359.1	ILMN_10285	ZNF221	NM_013359.1	NM_013359.1		7638	7019584	NM_013359.1	ZNF221	NP_037491.1	ILMN_1688765	0001240332	S	2080	CAGTGGAGAAAAGCCATTGAAATCTGGAGTGTGGGAAGAGATCTACTCAG	19	+	49163246-49163295	19q13.31b	Homo sapiens zinc finger protein 221 (ZNF221), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC138186; MGC141986	MGC138186; MGC141986
Homo sapiens	RefSeq	XM_001126945.1	ILMN_168645	LOC646272	XM_001126945.1	XM_001126945.1		646272	113416267	XM_001126945.1	LOC646272	XP_001126945.1	ILMN_3287178	0005570066	M	17	CCTACAGCTTGTCACCTTTTGAGCAGCGTGCCTCCCCGTACTACTTCCGT				4q28.3f	PREDICTED: Homo sapiens similar to Ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa (LOC646272), mRNA.					
Homo sapiens	Unigene	Hs.575725	ILMN_127906	HS.575725	Hs.575725		Hs.575725		83082460	DB335527			ILMN_1843756	0007200682	S	243	CTTGGCTCAATTTCCCCTCCTGAATGAAGACGTCTATTCTCCAAATTCAG	X	+	45509361-45509410		DB335527 TESOP2 Homo sapiens cDNA clone TESOP2008439 3, mRNA sequence					
Homo sapiens	RefSeq	NM_183079.1	ILMN_181615	PRNP	NM_001080121.1	NM_001080121.1		5621	122056622	NM_001080121.1	PRNP	NP_001073590.1	ILMN_1737988	0003170162	A	2523	GTGGGAAACCCTTTTGCGTGGTCCTTAGGCTTACAATGTGCACTGAATCG	20	+	4630022-4630071	20p13a	Homo sapiens prion protein (PRNP), transcript variant 3, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16004966] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [pmid 16004966] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence ISS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [pmid 16004966] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence ISS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [pmid 3755672] [evidence TAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 16294306] [evidence TAS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 16004966] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16286452] [evidence IPI]	CD230; PrP33-35C; ASCR; PrP27-30; GSS; CJD; PRIP; PrPc; PrP; MGC26679	CD230; PrP33-35C; ASCR; PrP27-30; GSS; CJD; PRIP; PrPc; PrP; MGC26679
Homo sapiens	RefSeq	NM_000981.3	ILMN_8752	RPL19	NM_000981.3	NM_000981.3		6143	68216257	NM_000981.3	RPL19	NP_000972.1	ILMN_1701832	0003610241	S	288	ATGGGCATAGGTAAGCGGAAGGGTACAGCCAATGCCCGAATGCCAGAGAA	17	+	34612209-34612218:34612768-34612807	17q12c	Homo sapiens ribosomal protein L19 (RPL19), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 1577483] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1577483] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 1577483] [evidence TAS]	MGC71997; DKFZp779D216; FLJ27452	MGC71997; DKFZp779D216; FLJ27452
Homo sapiens	RefSeq	NM_012198.2	ILMN_25626	GCA	NM_012198.2	NM_012198.2		25801	21614521	NM_012198.2	GCA	NP_036330.1	ILMN_1800602	0004230619	S	1179	GTTGGTGGTGTTTGAGGGTTGGCTAGAAATGAAAGCCTGGATTTTGTGCC	2	+	162925415-162925464	2q24.2d	Homo sapiens grancalcin, EF-hand calcium binding protein (GCA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1530588] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1530588] [evidence TAS]	The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 1530588] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 1530588] [evidence TAS]	GCL	GCL
Homo sapiens	Unigene	Hs.202053	ILMN_81745	HS.202053	Hs.202053		Hs.202053		4988380	AI700480			ILMN_1895223	0001430184	S	321	AGTCACACAGCCAAAAGGAGGAAGCTCCAGGATTCAAAGGAGAGTCGGCC	18	-	71164210-71164259		wd14d12.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2328119 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004108.2	ILMN_7646	FCN2	NM_004108.2	NM_004108.2		2220	61744444	NM_004108.2	FCN2	NP_004099.2	ILMN_1714057	0004040142	I	173	CTGCCTGGGGCCCCTGGGCCCAAGGGAGAGGCAGGCACCAATGGAAAGAG	9	+	136914255-136914304	9q34.3a	Homo sapiens ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin) (FCN2), transcript variant SV0, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which a microorganism (or other particulate material) is rendered more susceptible to phagocytosis by coating with an opsonin, a blood serum protein such as a complement component or antibody [goid 8228] [pmid 8576206] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 8576206] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8576206] [evidence TAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 8576206] [evidence TAS]	EBP-37; FCNL; ficolin-2; P35	EBP-37; FCNL; ficolin-2; P35
Homo sapiens	RefSeq	NM_005373.1	ILMN_11213	MPL	NM_005373.1	NM_005373.1		4352	4885490	NM_005373.1	MPL	NP_005364.1	ILMN_1776640	0005050086	S	3570	GTCCTTTTCCCCCAGCACCTAGAGTAGTGCTTGGTGCATGATAGTAGGCC	1	+	43592647-43592696	1p34.2a	Homo sapiens myeloproliferative leukemia virus oncogene (MPL), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8020956] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8020956] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8020956] [evidence TAS]	 [goid 4896] [evidence IEA];  [goid 4896] [evidence IEA]	TPOR; MPLV; C-MPL; CD110	TPOR; MPLV; C-MPL; CD110
Homo sapiens	RefSeq	NR_029852.1	ILMN_388140	MIR363	NR_029852.1	NR_029852.1		574031	262206157	NR_029852.1	MIR363		ILMN_3309960	0000580300	S	7	GGGTGGATCACGATGCAATTTTGATGAGTATCATAGGAGAAAAATTGCAC				Xq26.2b	Homo sapiens microRNA 363 (MIR363), microRNA.					
Homo sapiens	RefSeq	XM_926023.1	ILMN_39418	LOC642530	XM_926023.1	XM_926023.1		642530	88984299	XM_926023.1	LOC642530	XP_931116.1	ILMN_1666970	0003520341	S	241	CATTCTCAATTTCTTACTCTTCATAATTTAGCTACAAATAAATTCAAATT	5	+	93954511-93954560		PREDICTED: Homo sapiens hypothetical protein LOC642530 (LOC642530), mRNA.					
Homo sapiens	RefSeq	NR_030161.1	ILMN_387791	MIR486	NR_030161.1	NR_030161.1		619554	262205146	NR_030161.1	MIR486		ILMN_3309609	0001030494	S	17	GCCCCGAGGCCCTTCATGCTGCCCAGCTCGGGGCAGCTCAGTACAGGATA				8p11.21b	Homo sapiens microRNA 486 (MIR486), microRNA.					
Homo sapiens	RefSeq	NM_147127.2	ILMN_16313	EVC2	NM_147127.3	NM_147127.3		132884	93277095	NM_147127.3	EVC2	NP_667338.3	ILMN_1762735	0000630114	S	4182	TATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCAGGGCC	4	-	5615225-5615274	4p16.1g	Homo sapiens Ellis van Creveld syndrome 2 (EVC2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			LBN	LBN
Homo sapiens	RefSeq	NM_003003.2	ILMN_32750	SEC14L1	NM_003003.2	NM_003003.2		6397	88758562	NM_003003.2	SEC14L1	NP_002994.2	ILMN_2391912	0001770044	A	2166	TTCCCCGGGTGGACGACGTGCTTGCGTCCCTGCAGGTCTCTTCGCACAAG	17	+	72721073-72721122	17q25.2b	Homo sapiens SEC14-like 1 (S. cerevisiae) (SEC14L1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 8697811] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8697811] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [pmid 8697811] [evidence TAS]	SEC14L; DKFZp686C06176; PRELID4A	SEC14L; DKFZp686C06176; PRELID4A
Homo sapiens	RefSeq	NM_003003.2	ILMN_32750	SEC14L1	NM_003003.2	NM_003003.2		6397	88758562	NM_003003.2	SEC14L1	NP_002994.2	ILMN_2285802	0004200441	I	2435	CGCCCACCCAGCGGCGACATTGTACAGACTCCTCTCACCTCTAGATAGCA	17	+	72721767-72721816	17q25.2b	Homo sapiens SEC14-like 1 (S. cerevisiae) (SEC14L1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 8697811] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8697811] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [pmid 8697811] [evidence TAS]	SEC14L; DKFZp686C06176; PRELID4A	SEC14L; DKFZp686C06176; PRELID4A
Homo sapiens	RefSeq	NM_152914.1	ILMN_13345	C17ORF103	NM_152914.2	NM_152914.2		256302	116325984	NM_152914.2	C17orf103	NP_690878.2	ILMN_1661735	0004220079	S	454	TTTTGTAAGGACACTCATCTGTGCCCCACGTCCAGATCCCTGGAGGCAGC	17	-	21146465-21146514	17p11.2b	Homo sapiens chromosome 17 open reading frame 103 (C17orf103), mRNA.				DKFZp761I1115; DKFZp762H185	
Homo sapiens	RefSeq	XR_040873.1	ILMN_344628	LOC729862	XR_040873.1	XR_040873.1		729862	169167876	XR_040873.1	LOC729862		ILMN_3225978	0005720022	A	969	AACCTCCTCCGTCAGCCCCAAGGCCACTGAACCCTGCGTAGCGAGAACCG				5p14.1a	PREDICTED: Homo sapiens misc_RNA (LOC729862), miscRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Homo sapiens	RefSeq	NM_030938.2	ILMN_26866	TMEM49	NM_030938.2	NM_030938.2		81671	20070348	NM_030938.2	TMEM49	NP_112200.2	ILMN_1692754	0006280672	S	1798	ATATTCCATCCTGCCCAACCCTTCCTCTCCCATCCTCAAAAAAGGGCCAT	17	+	55272524-55272573	17q23.1a	Homo sapiens transmembrane protein 49 (TMEM49), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the ER-Golgi intermediate compartment system [goid 33116] [evidence IEA]			VMP1; DKFZP566I133	VMP1; DKFZP566I133
Homo sapiens	RefSeq	NM_001143.1	ILMN_28550	AMELY	NM_001143.1	NM_001143.1		266	4502072	NM_001143.1	AMELY	NP_001134.1	ILMN_1727258	0007040402	S	625	CCAAGCAGGAGGAAGTGGATTAAAAGACCAGAATATGAGACAGGAACTGA	Y	-	6794086-6794113:6794114-6794119:6796078-6796093	Yp11.2h	Homo sapiens amelogenin, Y-linked (AMELY), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		amelogenin; AMGL; AMGY	amelogenin; AMGL; AMGY
Homo sapiens	RefSeq	NM_004285.3	ILMN_182713	H6PD	NM_004285.3	NM_004285.3		9563	70780382	NM_004285.3	H6PD	NP_004276.2	ILMN_1721136	0005420066	S	8549	TGAGGAGCAGAGAGACTGTTCCCTTGGGTGGAGAGGTGTGGGCATGAGAG	1	+	9253415-9253464	1p36.22d	Homo sapiens hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) (H6PD), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [pmid 10349511] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate [goid 17057] [evidence IEA]; Catalysis of the reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H [goid 47936] [evidence IEA]	MGC87643; GDH; DKFZp686A01246; G6PDH	MGC87643; GDH; DKFZp686A01246; G6PDH
Homo sapiens	RefSeq	NM_004285.3	ILMN_182713	H6PD	NM_004285.3	NM_004285.3		9563	70780382	NM_004285.3	H6PD	NP_004276.2	ILMN_2198823	0002470168	S	8832	CTACCTCAGCCTCCCGAGTAGCTGGGATTACACCACCATGCCCAGCAAAT	1	+	9253698-9253747	1p36.22d	Homo sapiens hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) (H6PD), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: D-glucose 6-phosphate + NADP+ = D-glucono-1,5-lactone 6-phosphate + NADPH + H+ [goid 4345] [pmid 10349511] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate [goid 17057] [evidence IEA]; Catalysis of the reaction: beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H [goid 47936] [evidence IEA]	MGC87643; GDH; DKFZp686A01246; G6PDH	MGC87643; GDH; DKFZp686A01246; G6PDH
Homo sapiens	Unigene	Hs.453381	ILMN_93839	HS.453381	Hs.453381		Hs.453381		22519718	BU078529			ILMN_1825249	0006980445	S	381	CAGCCAACAGGCCTACCAGTCCTTGTACTCTATGCAGCTACTTCCCCTGC	6	-	132257556-132257605		in27e08.x1 Human Fetal Pancreas 1B Homo sapiens cDNA clone IMAGE: 3, mRNA sequence					
Homo sapiens	RefSeq	NM_138294.2	ILMN_165580	PATE1	NM_138294.2	NM_138294.2		160065	56676310	NM_138294.2	PATE1	NP_612151.1	ILMN_3235416	0001440484	S	1262	CATCAGCCACTTGTGTGAAGAGATGCCCCATGACCCCAGATGCCTCTCCC	11	+	125124707-125124756	11q24.2b	Homo sapiens prostate and testis expressed 1 (PATE1), mRNA.				MGC129554	MGC129554
Homo sapiens	RefSeq	NM_138294.2	ILMN_165580	PATE1	NM_138294.2	NM_138294.2		160065	56676310	NM_138294.2	PATE1	NP_612151.1	ILMN_1719033	0002810497	S	1187	CCTGGAGCATGGCATAGAGGAAGCTGAGAAATGTGGGGTCTGAGGAAGCC	11	+	125124632-125124681	11q24.2b	Homo sapiens prostate and testis expressed 1 (PATE1), mRNA.				MGC129554	MGC129554
Homo sapiens	RefSeq	NM_001012983.1	ILMN_356894	FAM136B	NM_001012983.1	NM_001012983.1		387071	170295794	NM_001012983.1	FAM136B	NP_001013001.1	ILMN_3241756	0005360309	S	230	ACCACCTGGCTCGGTGCACCATGCATTGCAATGACAAAGCCAAAGATTCA	6	+	3045847-3045896		Homo sapiens family with sequence similarity 136, member B (FAM136B), mRNA.					
Homo sapiens	RefSeq	NM_001790.3	ILMN_16127	CDC25C	NM_001790.3	NM_001790.3		995	125625349	NM_001790.3	CDC25C	NP_001781.2	ILMN_2407619	0004200451	A	1434	GCCGCTGTCTGCGTGAAGAGGACAGGTCTCTGAACCAGTATCCTGCATTG	5	-	137664181-137664218:137665242-137665253	5q31.2c	Homo sapiens cell division cycle 25 homolog C (S. pombe) (CDC25C), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11897663] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11063929] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12766774] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9278512] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1828290] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11063929] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10330186] [evidence EXP]	Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 11139144] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 1828290] [evidence TAS]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [pmid 2195549] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11139144] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 11078813] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16330544] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17110335] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17349584] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CDC25	CDC25
Homo sapiens	RefSeq	NM_001790.3	ILMN_16127	CDC25C	NM_001790.3	NM_001790.3		995	125625349	NM_001790.3	CDC25C	NP_001781.2	ILMN_2294431	0006110706	I	633	GTAGCCCAGCACAGCTTCTTTGTAGCACTCCGAATGGTTTGGACCGTGGC	5	-	137689450-137689492:137689609-137689615	5q31.2c	Homo sapiens cell division cycle 25 homolog C (S. pombe) (CDC25C), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11897663] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11063929] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12766774] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9278512] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1828290] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11063929] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10330186] [evidence EXP]	Progression through M phase, the part of the mitotic cell cycle during which mitosis takes place [goid 87] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 11139144] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 1828290] [evidence TAS]; Passage through a cell cycle control point late in G1 phase of the mitotic cell cycle just before entry into S phase; in most organisms studied, including budding yeast and animal cells, passage through start normally commits the cell to progressing through the entire cell cycle [goid 7089] [pmid 2195549] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11139144] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 11078813] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16330544] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17110335] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17349584] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CDC25	CDC25
Homo sapiens	Unigene	Hs.539599	ILMN_104616	HS.539599	Hs.539599		Hs.539599		8905106	BE217788			ILMN_1840469	0007570754	S	174	CAGGGTTACACTTGGGGTCACAAAAAGTGAGTGGTAAATCCTACCTCCAG	13	+	96878350-96878399		hv29g09.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3174880 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001564.2	ILMN_21856	ING2	NM_001564.2	NM_001564.2		3622	59814661	NM_001564.2	ING2	NP_001555.1	ILMN_1671265	0007160025	S	583	CCCCGCAGGCAGCGGACCAGTGAAAGCCGTGATTTATGTCACATGGCAAA	4	+	184431716-184431765	4q35.1c	Homo sapiens inhibitor of growth family, member 2 (ING2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15243141] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [pmid 10072587] [evidence TAS]; A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; in Saccharomyces it activates the transcription of genes in response to growth in a nonfermentable carbon source; consists of four known subunits: HAP2, HAP3, HAP4 and HAP5 [goid 16602] [pmid 15243141] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 15243141] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10072587] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 15243141] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 10072587] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	p33ING2; ING1L	p33ING2; ING1L
Homo sapiens	RefSeq	NM_005239.4	ILMN_21293	ETS2	NM_005239.4	NM_005239.4		2114	56119171	NM_005239.4	ETS2	NP_005230.1	ILMN_1720158	0004220605	S	3188	GCTTGTCTGTTTACTAGCTGCGTGGCCTTGGACGGGTGGCTGACATCTGT	21	+	39118265-39118314	21q22.2a	Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 2 (avian) (ETS2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8596630] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8596630] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18242510] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18598946] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	XM_371848.4	ILMN_309053	C6ORF115	NM_021243.2	NM_021243.2		58527	153792370	NM_021243.2	C6orf115	NP_067066.1	ILMN_1720858	0006020681	A	654	CAGGAATCTGGTTAGGAATTGCAGGCAATGAGATTTTTTGCGGGGCAGGG	6	+	139364248-139364297	6q24.1a	Homo sapiens chromosome 6 open reading frame 115 (C6orf115), mRNA.				HSPC280; PRO2013	
Homo sapiens	RefSeq	XR_016024.2	ILMN_176101	LOC729779	XR_016024.2	XR_016024.2		729779	169161318	XR_016024.2	LOC729779		ILMN_3229057	0003840326	A	712	CTGAGAGTGCCCCTTGGTCCTAGAATACGAGGTACAGGCTGGAAACAGCT	1	-	79293618-79293667	1p31.1d	PREDICTED: Homo sapiens misc_RNA (LOC729779), miscRNA.					
Homo sapiens	RefSeq	NR_001293.1	ILMN_4302	SNORD107	NR_001293.1	NR_001293.1		91380	30089681	NR_001293.1	SNORD107		ILMN_2132082	0001230491	S	1	GGTTCATGATGACACAGGACCTTGTCTGAACATAATGATTTCAAAATTTG	15	+	22778234-22778283	15q11.2e	Homo sapiens small nucleolar RNA, C/D box 107 (SNORD107), small nucleolar RNA.				HBII-436	HBII-436
Homo sapiens	RefSeq	NR_001293.1	ILMN_4302	SNORD107	NR_001293.1	NR_001293.1		91380	30089681	NR_001293.1	SNORD107		ILMN_1750402	0002120369	S	4	TCATGATGACACAGGACCTTGTCTGAACATAATGATTTCAAAATTTGAGC	15	+	22778237-22778286	15q11.2e	Homo sapiens small nucleolar RNA, C/D box 107 (SNORD107), small nucleolar RNA.				HBII-436	HBII-436
Homo sapiens	RefSeq	NM_002245.2	ILMN_26460	KCNK1	NM_002245.2	NM_002245.2		3775	15451900	NM_002245.2	KCNK1	NP_002236.1	ILMN_1718863	0004810703	S	1367	GCTGTGACCCCAGCAGGATGTCTAATATGTGAGGAAATGAGATGTCCACC	1	+	231874087-231874136	1q42.2c	Homo sapiens potassium channel, subfamily K, member 1 (KCNK1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8605869] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8605869] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA];  [goid 5242] [pmid 8605869] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	K2p1.1; TWIK-1; TWIK1; HOHO; DPK	TWIK-1; TWIK1; DPK; K2p1.1; HOHO
Homo sapiens	RefSeq	NM_002245.2	ILMN_26460	KCNK1	NM_002245.2	NM_002245.2		3775	15451900	NM_002245.2	KCNK1	NP_002236.1	ILMN_2071641	0006660671	S	1444	CGACCTTACATAGGAGGAGAATACTTGAAGCAGTATGCTGCTGTGGTTAG	1	+	231874164-231874213	1q42.2c	Homo sapiens potassium channel, subfamily K, member 1 (KCNK1), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8605869] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8605869] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA];  [goid 5242] [pmid 8605869] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	K2p1.1; TWIK-1; TWIK1; HOHO; DPK	TWIK-1; TWIK1; DPK; K2p1.1; HOHO
Homo sapiens	RefSeq	XM_945614.1	ILMN_44976	PMS2L1	XM_945614.1	XM_945614.1		5379	89026176	XM_945614.1	PMS2L1	XP_950707.1	ILMN_1689474	0006280300	A	1705	GTAGGGCACCCTCAGAGAATGTGGCTTTGGACTTCATCACAGCTAGGGTC				7q22.1c	PREDICTED: Homo sapiens postmeiotic segregation increased 2-like 1, transcript variant 2 (PMS2L1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10101297] [evidence ND ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 10101297] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10101297] [evidence ND ]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]		
Homo sapiens	RefSeq	NR_029515.1	ILMN_388981	MIR100	NR_029515.1	NR_029515.1		406892	262205761	NR_029515.1	MIR100		ILMN_3309339	0004560458	S	5	TGCCACAAACCCGTAGATCCGAACTTGTGGTATTAGTCCGCACAAGCTTG				11q24.1a	Homo sapiens microRNA 100 (MIR100), microRNA.					
Homo sapiens	RefSeq	NM_014164.4	ILMN_9982	FXYD5	NM_014164.4	NM_014164.4		53827	47778936	NM_014164.4	FXYD5	NP_054883.3	ILMN_2309848	0007380546	A	810	AAGGCTACCTGGCGCCTTGGGGGCTGTCCCTCAAGTTATCTCCTCTGCTA	19	+	40352545-40352594	19q13.12a	Homo sapiens FXYD domain containing ion transport regulator 5 (FXYD5), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11756660] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell [goid 30033] [pmid 11756660] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of calcium-dependent cell-cell adhesion [goid 46588] [pmid 11756660] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11756660] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [pmid 11756660] [evidence IDA]	dysad; OIT2; PRO6241; HSPC113; RIC; IWU1; KCT1; IWU-1	dysad; OIT2; PRO6241; HSPC113; RIC; IWU1; KCT1; IWU-1
Homo sapiens	RefSeq	NM_206902.1	ILMN_27258	RTN2	NM_206901.1	NM_206901.1		6253	46255006	NM_206901.1	RTN2	NP_996784.1	ILMN_1749115	0003460376	A	777	GGGTGTCAGGATCACTCCCACTAGGGACTCTGCGCTAATTACCTGAGCGA	19	-	50680641-50680690	19q13.32a	Homo sapiens reticulon 2 (RTN2), transcript variant 3, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 9693037] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence NAS]	NSP2; NSPL1	NSP2; NSPL1
Homo sapiens	RefSeq	XM_937919.1	ILMN_38951	LOC648841	XM_937919.1	XM_937919.1		648841	89061416	XM_937919.1	LOC648841	XP_943012.1	ILMN_1705422	0005290059	S	276	CCTTATTTGCCCTGACCCTTCCCTGGCTCTGCCATACCCCTTCTCTGGGA					PREDICTED: Homo sapiens similar to N-acetylated-alpha-linked acidic dipeptidase II (NAALADase II) (LOC648841), mRNA.					
Homo sapiens	RefSeq	NM_012084.3	ILMN_16464	GLUD2	NM_012084.3	NM_012084.3		2747	34222271	NM_012084.3	GLUD2	NP_036216.2	ILMN_1777521	0000510017	S	2055	AGTGCTGGGGAAGGGACAGTCAAGAGCAGTCAGTTGCTTACTTATTTTGC	X	+	120011197-120011246	Xq24e	Homo sapiens glutamate dehydrogenase 2 (GLUD2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [pmid 8207021] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 8207021] [evidence IDA]	Catalysis of the reaction: L-glutamate + H2O + NAD+ = 2-oxoglutarate + NH3 + NADH + H+ [goid 4352] [pmid 8207021] [evidence IDA]; Catalysis of the reaction: L-glutamate + H2O + NAD+ = 2-oxoglutarate + NH3 + NADH + H+ [goid 4352] [pmid 15578726] [evidence IDA]; Catalysis of the reaction: L-glutamate + H2O + NAD(P)+ = 2-oxoglutarate + NH3 + NAD(P)H + H+ [goid 4353] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	GLUDP1; GDH2	GLUDP1; GDH2
Homo sapiens	RefSeq	NM_016848.2	ILMN_4551	SHC3	NM_016848.3	NM_016848.3		53358	142362251	NM_016848.3	SHC3	NP_058544.2	ILMN_1770905	0006040689	S	2125	AGGTCAGGAGGACCTGGAGTGGACTAGAATCGGGGCTGCTGGAACTGGGA	9	-	90818099-90818148	9q22.1d	Homo sapiens SHC (Src homology 2 domain containing) transforming protein 3 (SHC3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 8808684] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8808684] [evidence TAS]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8808684] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11877420] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SHCC; N-Shc; NSHC	SHCC; N-Shc; NSHC
Homo sapiens	RefSeq	XM_940552.1	ILMN_43973	LOC651400	XM_940552.2	XM_940552.2		651400	113431208	XM_940552.2	LOC651400	XP_945645.2	ILMN_1714324	0001740315	S	132	GAGTCTCATGTGGTTGGTGCTGAGCCTGCATCTGAGCGAAGTTCATGCTG					PREDICTED: Homo sapiens similar to hect domain and RLD 2 (LOC651400), mRNA.					
Homo sapiens	Unigene	Hs.582097	ILMN_134278	HS.582097	Hs.582097		Hs.582097		13747428	BG221407			ILMN_1860665	0005870411	S	303	TGGCAATGGGAGGATTGTGCTGGTTTGGCTGAAATGAAGTGCTCTACGGC	4	+	188573613-188573662		RST41218 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_199482.1	ILMN_10571	PREI3	NM_199482.1	NM_199482.1		25843	41349450	NM_199482.1	PREI3	NP_955776.1	ILMN_1733356	0000240288	A	2228	GGCTTTGAACACTGCCCATCAGCTACAGTCATTACTGTTCCCCAACCCAC	2	+	198125136-198125185	2q33.1b	Homo sapiens preimplantation protein 3 (PREI3), transcript variant 2, mRNA.				2C4D; MGC12264; MOB1; CGI-95; MOB3	2C4D; MGC12264; MOB1; CGI-95; MOB3
Homo sapiens	RefSeq	NM_199482.1	ILMN_10571	PREI3	NM_199482.1	NM_199482.1		25843	41349450	NM_199482.1	PREI3	NP_955776.1	ILMN_1753166	0006520379	I	10	GACTGCTGGCCTGTTTTCTACCCTGATTCCTTAGGTGGCTTCTGGGACAG	2	+	198088574-198088623	2q33.1b	Homo sapiens preimplantation protein 3 (PREI3), transcript variant 2, mRNA.				2C4D; MGC12264; MOB1; CGI-95; MOB3	2C4D; MGC12264; MOB1; CGI-95; MOB3
Homo sapiens	RefSeq	NM_001916.2	ILMN_13263	CYC1	NM_001916.3	NM_001916.3		1537	148529008	NM_001916.3	CYC1	NP_001907.2	ILMN_1815115	0001770520	S	1031	GTGTCTGCTTGCCATCCTGCCAGAACAGGCCCTCAAGCCCAAGAGCCATC	8	+	145152249-145152298	8q24.3g	Homo sapiens cytochrome c-1 (CYC1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 2536365] [evidence TAS]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Enables the directed movement of electrons from the CoQH2-cytochrome c reductase complex and the cytochrome c oxidase complex [goid 45155] [pmid 2536365] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	UQCR4	
Homo sapiens	RefSeq	NR_002562.1	ILMN_21380	SNORD28	NR_002562.1	NR_002562.1		9300	74315928	NR_002562.1	SNORD28		ILMN_1656303	0003830196	S	23	GCTGATGTTCTGTGAGGTACAAAAGTTAATAGCATGTTAGAGTTCTGATG	11	-	62622095-62622144	11q12.3b	Homo sapiens small nucleolar RNA, C/D box 28 (SNORD28), small nucleolar RNA.				U28; RNU28	U28; RNU28
Homo sapiens	RefSeq	NM_001024210.1	ILMN_12135	S100A13	NM_001024210.1	NM_001024210.1		6284	66737367	NM_001024210.1	S100A13	NP_001019381.1	ILMN_1667138	0007560110	I	282	GAACAGTCTTCACGTCTCCACCCACTTCCAGATCCCAGAGGAGACAGACA	1	-	153604520-153604569	1q21.3d	Homo sapiens S100 calcium binding protein A13 (S100A13), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8878558] [evidence TAS]		
Homo sapiens	RefSeq	NM_021133.2	ILMN_25186	RNASEL	NM_021133.2	NM_021133.2		6041	30795246	NM_021133.2	RNASEL	NP_066956.1	ILMN_2210601	0000110064	S	3843	GGTGCTAAGTCTGATGTTCTTTCCATGAATCATTGTGGTGGTTGAGATGG	1	-	182543027-182543076	1q25.3c	Homo sapiens ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) (RNASEL), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7514601] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7514601] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16891] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp781D08126; MGC133329; RNS4; PRCA1; MGC104972	DKFZp781D08126; MGC133329; RNS4; PRCA1; MGC104972
Homo sapiens	RefSeq	NM_021133.2	ILMN_25186	RNASEL	NM_021133.2	NM_021133.2		6041	30795246	NM_021133.2	RNASEL	NP_066956.1	ILMN_1671281	0001820682	S	3510	GCTCCTCACGGGCGATGGCTGTCTTTTCTTGACTTTGTATCTTCACTGCC	1	-	182543360-182543409	1q25.3c	Homo sapiens ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) (RNASEL), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7514601] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7514601] [evidence IDA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16891] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp781D08126; MGC133329; RNS4; PRCA1; MGC104972	DKFZp781D08126; MGC133329; RNS4; PRCA1; MGC104972
Homo sapiens	RefSeq	XM_944175.1	ILMN_34805	LOC650399	XM_944175.1	XM_944175.1		650399	89061676	XM_944175.1	LOC650399	XP_949268.1	ILMN_1799770	0002850377	S	430	AGGCCGTGGACGGCGTCCACGTCGCGATGCCCTGGACGGCGTCCTCGTTA					PREDICTED: Homo sapiens hypothetical protein LOC650399 (LOC650399), mRNA.					
Homo sapiens	RefSeq	NM_001015054.1	ILMN_4875	MPG	NM_001015054.1	NM_001015054.1		4350	62632770	NM_001015054.1	MPG	NP_001015054.1	ILMN_1757562	0001850128	I	54	GCGTCTCCCACCTGACGCGGCCAGGTGCCCAGTTGCTCTTCAAGGCCTTT	16	+	67071-67120	16p13.3f	Homo sapiens N-methylpurine-DNA glycosylase (MPG), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10583946] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10854423] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 10854423] [evidence TAS]; The repair of alkylation damage, e.g. the removal of the alkyl group at the O6-position of guanine by O6-alkylguanine-DNA alkyltransferase (AGT) [goid 6307] [pmid 1645538] [evidence TAS]; The disruption of the bond between the sugar in the backbone and the A or G base, causing the base to be removed and leaving a depurinated sugar [goid 45007] [pmid 10583946] [evidence EXP]	Interacting selectively with damaged DNA [goid 3684] [pmid 10854423] [evidence TAS]; Catalysis of the hydrolysis of alkylated DNA; recognizes and removes alkylated purines and pyrimidines by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic or apyrimidinic (AP) site. Enzyme has broad substrate specificity, being able to recognize alkylpurines, alkylpyrimidines or ethenopurines [goid 3905] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]	anpg; PIG16; CRA36.1; Mid1; PIG11; APNG; MDG; AAG	anpg; PIG16; CRA36.1; Mid1; PIG11; APNG; MDG; AAG
Homo sapiens	RefSeq	NM_020706.1	ILMN_18564	SFRS15	NM_020706.1	NM_020706.1		57466	40789228	NM_020706.1	SFRS15	NP_065757.1	ILMN_1659874	0000990056	S	3497	GCCTGAGGTGACAGACAGGGCAGGTGGTAACAAAACCGTTGAACCTCCCA	21	-	31965737-31965786	21q22.11b	Homo sapiens splicing factor, arginine/serine-rich 15 (SFRS15), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	SCAF4; DKFZP434E098; FLJ23364; SRA4; KIAA1172	SCAF4; DKFZP434E098; FLJ23364; SRA4; KIAA1172
Homo sapiens	Unigene	Hs.552750	ILMN_111105	HS.552750	Hs.552750		Hs.552750		19757788	BQ022509			ILMN_1884001	0006220435	S	179	TGATGCTCACATTAGGACAATATCTAGGGAAGGCAGGCCATGACACAGGC	3	+	108582175-108582224		UI-1-BB1p-akm-g-04-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-akm-g-04-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_182562.1	ILMN_183927	FAM169B	NM_182562.2	NM_182562.2		283777	110624767	NM_182562.2	FAM169B	NP_872368.2	ILMN_1674608	0001660243	S	3100	GGAGAGTGAAGTCTACAGCCTAGAGGGTGCCCTGTGTGTGGTGTCAGATG	15	-	98980539-98980588	15q26.3a	Homo sapiens family with sequence similarity 169, member B (FAM169B), mRNA.					
Homo sapiens	RefSeq	NM_033624.2	ILMN_166335	FBXO21	NM_033624.2	NM_033624.2		23014	53692180	NM_033624.2	FBXO21	NP_296373.1	ILMN_2358647	0001260164	A	3488	TGGGGTGACCAAGGTTTGGAAAGCCACCTGAGACCACTTCATAGCAAGGG	12	-	117582280-117582329	12q24.22b	Homo sapiens F-box protein 21 (FBXO21), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]	FBX21; MGC26682; FLJ90233; DKFZp434G058; KIAA0875	FBX21; MGC26682; FLJ90233; DKFZp434G058; KIAA0875
Homo sapiens	RefSeq	XM_929862.1	ILMN_44661	LOC646900	XM_929862.1	XM_929862.1		646900	88953969	XM_929862.1	LOC646900	XP_934955.1	ILMN_1802906	0003460162	S	279	GGATGAATGGCTTTATAAGTTCAGTGCTGATGAATTCTTCATACCCCGGA	2	-	232007053-232007102		PREDICTED: Homo sapiens similar to zinc finger and BTB domain containing 8 opposite strand (LOC646900), mRNA.					
Homo sapiens	RefSeq	NM_012161.2	ILMN_5227	FBXL5	NM_012161.2	NM_012161.2		26234	21536438	NM_012161.2	FBXL5	NP_036293.1	ILMN_1673370	0000450114	A	3115	AACATCATGAGAGTGGAGGCCTGCCACCCAGAAAGGCACATACTAGTGCC	4	-	15606360-15606409	4p15.33a	Homo sapiens F-box and leucine-rich repeat protein 5 (FBXL5), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FBL4; FLR1; FBL5	FBL4; FLR1; FBL5
Homo sapiens	RefSeq	NM_012161.2	ILMN_5227	FBXL5	NM_012161.2	NM_012161.2		26234	21536438	NM_012161.2	FBXL5	NP_036293.1	ILMN_2378100	0006250497	A	2147	GGTTTTCGAGCCTGCTGCCGCTCTGGCGAATGACCCTTGACTTCTGATCT	4	-	15607328-15607345:15607346-15607377	4p15.33a	Homo sapiens F-box and leucine-rich repeat protein 5 (FBXL5), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FBL4; FLR1; FBL5	FBL4; FLR1; FBL5
Homo sapiens	RefSeq	XM_001719903.1	ILMN_350470	LOC100130298	XM_001719903.1	XM_001719903.1		100130298	169173317	XM_001719903.1	LOC100130298	XP_001719955.1	ILMN_3270853	0007400634	M	418	CTTCAGACTCACAGCCGCGCTAGTTAGGGTACCACTTGTTCAGACAGCTG				8q12.2a	PREDICTED: Homo sapiens similar to hCG1816373 (LOC100130298), mRNA.					
Homo sapiens	Unigene	Hs.554567	ILMN_112030	HS.554567	Hs.554567		Hs.554567		2268582	AA526513			ILMN_1849726	0006370328	S	353	GGCCAGGAGAGGTTAGGGGTCGAGATAAGGTGGATGTTTGCTGTAAGGCA	13	-	43525879-43525928		ni60f01.s1 NCI_CGAP_Ov2 Homo sapiens cDNA clone IMAGE:981241, mRNA sequence					
Homo sapiens	RefSeq	NM_175064.2	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1665985	0002690674	A	7721	GAACCCGAGGGCCAGGAAGAACCGCTCTCAGATAGTCCTGTTCCAGAAAC				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	Ringo1; DKFZp434A1014
Homo sapiens	RefSeq	XM_933518.1	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1678314	0000580180	I	11665	TGTCTCATGAGGAAATGATGGGAATTCCTTTATGACTCTGCAGTGGTCCC				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	
Homo sapiens	RefSeq	XM_935827.1	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1699383	0000070092	A	4891	TTTTGGAGGTCATGGCGGGAGGATCACCTGAGGCCAGGAGTTTGAGGCCA				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	
Homo sapiens	RefSeq	NM_145325.2	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1808946	0000830678	I	755	TGTGGAGTCTGGGCCTGTGGCTCCCGTCTGCCCCATGGGACTTCTGTAGT				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	RPB11; MGC105050; HRPB11B; MGC54043
Homo sapiens	RefSeq	XM_935874.1	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1754584	0002600220	S	18805	GACATTCACCAAAGAAGGACACAGCCCACTAGTGAGTTACACTCGAGAGG				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	
Homo sapiens	RefSeq	XM_932416.1	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1740486	0000840435	S	15174	GTTGACGGCTGGTCGTGATCTTTCCCGTAATCTGTCCCCTCTTACGGAAC				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	
Homo sapiens	RefSeq	XM_935799.1	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1775442	0003460138	I	11457	ACCCGCGGCCACAATCCTGAGACTTCCCCCCGGGAGGCACACTTCTCCTC				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	
Homo sapiens	RefSeq	XM_927410.1	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1657472	0000840139	I	12834	GACCAGGGAAGGATATGAGGAAGTGTTCTGAGGACAGAGAAACGGGAGAA				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	
Homo sapiens	RefSeq	XM_927410.1	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1678827	0004480452	A	7722	TGAACCCGAGGGCCAGGAAGAACCGCTCTCAGATAGTCCTGTTCCAGAAA				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	
Homo sapiens	RefSeq	XM_939847.1	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1762769	0007330128	S	12383	GCTGCTTGGTAGGAGGACACCCCAGAGAGCACCTCCAATCCTGTTCTTTC				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	
Homo sapiens	RefSeq	XM_943892.1	ILMN_307164	POLR2J4	NR_003655.1	NR_003655.1		84820	153791226	NR_003655.1	POLR2J4		ILMN_1662743	0000450037	S	15261	TGCTAGGATCCAGAAGAGTATGTTATCAATTCTCAAGCCTAGGAGAAGTC				7p13d	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa pseudogene (POLR2J4) on chromosome 7.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	RPB11-phi; MGC13098	
Homo sapiens	RefSeq	NR_004388.1	ILMN_352221	SCARNA14	NR_004388.1	NR_004388.1		692149	161087008	NR_004388.1	SCARNA14		ILMN_3247636	0003140521	S	80	TCCTGCCGACAGGGTCTGTATAGTTATCAGATTTTCTGTGCGATGGCTCC	15	-	66639551-66639600		Homo sapiens small Cajal body-specific RNA 14 (SCARNA14), guide RNA.				U100	U100
Homo sapiens	RefSeq	NR_003701.1	ILMN_339766	SNORD58C	NR_003701.1	NR_003701.1		100124516	156447413	NR_003701.1	SNORD58C		ILMN_3239634	0000830471	S	40	CACCTTTGGAATAACTATGAAAGAAAACTATTCTGAGCAACCCTTTCACC	18	-	47015605-47015654		Homo sapiens small nucleolar RNA, C/D box 58C (SNORD58C), small nucleolar RNA.					
Homo sapiens	RefSeq	NM_144702.1	ILMN_12965	C1ORF92	NM_144702.1	NM_144702.1		149499	21389614	NM_144702.1	C1orf92	NP_653303.1	ILMN_1681923	0005820053	S	1770	CATGGCATTCTTCCCCTAGCCCCCTCCCACCTGCTTGCCTCTAAGACTCG	1	+	155169367-155169416	1q23.1b	Homo sapiens chromosome 1 open reading frame 92 (C1orf92), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP11-356J7.1; MGC45468; FLJ32884	RP11-356J7.1; MGC45468; FLJ32884
Homo sapiens	RefSeq	NM_033495.2	ILMN_1356	KLHL13	NM_033495.2	NM_033495.2		90293	45643137	NM_033495.2	KLHL13	NP_277030.2	ILMN_1719919	0006550328	S	2561	CCCACTTGACTGTGTGGGTGCATTGAGAACACAAAGTTTCCTAGACACAC	X	-	117032290-117032339	Xq24a	Homo sapiens kelch-like 13 (Drosophila) (KLHL13), mRNA.				BKLHD2; FLJ10262; MGC74791; KIAA1309	BKLHD2; FLJ10262; MGC74791; KIAA1309
Homo sapiens	RefSeq	NM_033495.2	ILMN_1356	KLHL13	NM_033495.2	NM_033495.2		90293	45643137	NM_033495.2	KLHL13	NP_277030.2	ILMN_2140510	0007380142	S	3038	AGCAGCTTCACCTGGAGAGCTGCTTTTGCTCAGTAAATTCAACTTCCATG	X	-	117031813-117031862	Xq24a	Homo sapiens kelch-like 13 (Drosophila) (KLHL13), mRNA.				BKLHD2; FLJ10262; MGC74791; KIAA1309	BKLHD2; FLJ10262; MGC74791; KIAA1309
Homo sapiens	RefSeq	NM_004157.2	ILMN_17938	PRKAR2A	NM_004157.2	NM_004157.2		5576	47157329	NM_004157.2	PRKAR2A	NP_004148.1	ILMN_1681888	0004290170	S	2304	GGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTGGGC	3	-	48788903-48788952	3p21.31e	Homo sapiens protein kinase, cAMP-dependent, regulatory, type II, alpha (PRKAR2A), mRNA.	An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10799517] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10799517] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10799517] [evidence TAS]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [pmid 9003463] [evidence NAS]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]	MGC3606; PKR2; PRKAR2	MGC3606; PKR2; PRKAR2
Homo sapiens	RefSeq	XM_001722630.1	ILMN_343246	LOC100133892	XM_001722630.1	XM_001722630.1		100133892	169163686	XM_001722630.1	LOC100133892	XP_001722682.1	ILMN_3242340	0002900021	S	65	TGTCCTCGGCACTGCCCTCCGTGGGGACGTCTGCACTCACAGTGTCCTCG					PREDICTED: Homo sapiens hypothetical protein LOC100133892 (LOC100133892), mRNA.					
Homo sapiens	RefSeq	NM_020360.2	ILMN_1153	PLSCR3	NM_020360.2	NM_020360.2		57048	31543416	NM_020360.2	PLSCR3	NP_065093.2	ILMN_1703433	0006940255	S	1620	GGGCCCTGCCTTCAGCTGGTGCTTGCTGCGATTCCTGTGCCTTATGTAAC	17	-	7293131-7293180	17p13.1d	Homo sapiens phospholipid scramblase 3 (PLSCR3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10930526] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which all major lipid classes are redistributed within the plasma membrane following cell activation or injury, resulting in surface exposure of phosphatidylserine (PS) and phosphatidylethanolamine (PE). Cell surface-exposed PS can serve as receptor sites for coagulation enzyme complexes, and contributes to cell clearance by the reticuloendothelial system [goid 17121] [pmid 10930526] [evidence NAS]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10930526] [evidence NAS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA];  [goid 17128] [pmid 10930526] [evidence NAS]		
Homo sapiens	RefSeq	NM_004737.3	ILMN_5209	LARGE	NM_004737.3	NM_004737.3		9215	59853527	NM_004737.3	LARGE	NP_004728.1	ILMN_1803412	0006220471	I	440	AGAAACGCATTCAGATGCATCAGCCGTTTGTAAAGCACCTGTCGTGAGCC	22	-	32582729-32582778	22q12.3b	Homo sapiens like-glycosyltransferase (LARGE), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 9892679] [evidence TAS]	The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [pmid 9892679] [evidence TAS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 9892679] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 9892679] [evidence TAS]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence ISS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [pmid 9892679] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [pmid 9892679] [evidence TAS]	MDC1D; KIAA0609	MDC1D; KIAA0609
Homo sapiens	RefSeq	NM_004737.3	ILMN_5209	LARGE	NM_004737.3	NM_004737.3		9215	59853527	NM_004737.3	LARGE	NP_004728.1	ILMN_1662038	0000010768	A	4102	TGCCCTACCCTCTGCTGGGCTGTTTGTATTGAGTTGCAATGTGACCAGCG	22	-	31999105-31999154	22q12.3b	Homo sapiens like-glycosyltransferase (LARGE), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 9892679] [evidence TAS]	The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [pmid 9892679] [evidence TAS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 9892679] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 9892679] [evidence TAS]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence ISS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [pmid 9892679] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [pmid 9892679] [evidence TAS]	MDC1D; KIAA0609	MDC1D; KIAA0609
Homo sapiens	RefSeq	NM_024771.1	ILMN_23582	NAT11	NM_024771.1	NM_024771.1		79829	13376118	NM_024771.1	NAT11	NP_079047.1	ILMN_2178244	0001090187	S	2815	ACTGGTCAATGGGTGCTTGGTGCCATACCCTGCTCACCCTAGTCTCTGCA	11	+	63480527-63480576	11q13.1a	Homo sapiens N-acetyltransferase 11 (NAT11), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ13848	FLJ13848
Homo sapiens	RefSeq	NM_018079.3	ILMN_28720	SRBD1	NM_018079.3	NM_018079.3		55133	39841072	NM_018079.3	SRBD1	NP_060549.3	ILMN_1798827	0002230730	S	3355	ACTTCTACTTGCCAACATCTGCCTTGCTGGACTTGTATGGGATTGTCTCC	2	-	45469582-45469631	2p21c-p21b	Homo sapiens S1 RNA binding domain 1 (SRBD1), mRNA.		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	FLJ10379	FLJ10379
Homo sapiens	RefSeq	XR_042041.1	ILMN_347743	LOC729051	XR_042041.1	XR_042041.1		729051	169212989	XR_042041.1	LOC729051		ILMN_3304042	0001510093	M	267	AGCAGCCGTGGACGTGGAGTTACCAAATCATCCGAAGTGGCTCCTGGACC				18q21.2a	PREDICTED: Homo sapiens hypothetical protein LOC729051 (LOC729051), miscRNA.					
Homo sapiens	RefSeq	XR_042041.1	ILMN_347743	LOC729051	XR_042041.1	XR_042041.1		729051	169212989	XR_042041.1	LOC729051		ILMN_3227440	0002940093	A	48	GGTCGGGGAAGCTGTGATGGCAATGAGAAGTCAACACACTGAGGATGGAG				18q21.2a	PREDICTED: Homo sapiens hypothetical protein LOC729051 (LOC729051), miscRNA.					
Homo sapiens	RefSeq	NM_018224.2	ILMN_41287	C7ORF44	NM_018224.2	NM_018224.2		55744	90855770	NM_018224.2	C7orf44	NP_060694.2	ILMN_2081335	0003930653	S	620	GTGACAGACACTCCTGCAACCCAGTTTTCCAGCCACCAGTGGGATGATGG	7	-	43679102-43679151	7p13e	Homo sapiens chromosome 7 open reading frame 44 (C7orf44), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ10803	FLJ10803
Homo sapiens	RefSeq	NM_014241.2	ILMN_24983	PTPLA	NM_014241.3	NM_014241.3		9200	82659104	NM_014241.3	PTPLA	NP_055056.3	ILMN_1725791	0000730221	S	530	AGAGAGTGTGGTGCTTTTTCTGGTCGCGTGGACTGTGACAGAGATCACTC	10	-	17681355-17681404	10p12.33c	Homo sapiens protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A (PTPLA), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		CAP	
Homo sapiens	RefSeq	NM_031946.3	ILMN_29137	CENTG3	NM_031946.3	NM_031946.3		116988	32307157	NM_031946.3	CENTG3	NP_114152.2	ILMN_1795918	0006220164	S	2823	AGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT	7	+	150472155-150472204	7q36.1d	Homo sapiens centaurin, gamma 3 (CENTG3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MRIP-1; AGAP3	MRIP-1; AGAP3
Homo sapiens	RefSeq	NM_018150.2	ILMN_11157	RNF220	NM_018150.2	NM_018150.2		55182	46397374	NM_018150.2	RNF220	NP_060620.2	ILMN_1694504	0004540328	S	2810	GACAGTGCTCCTGGCCACCCAGCCTCTGCTGAGAACCATTCCTGGGATTA	1	+	44887939-44887988	1p34.1e-p34.1d	Homo sapiens ring finger protein 220 (RNF220), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP4-678E16.1; FLJ10597	RP4-678E16.1; FLJ10597
Homo sapiens	RefSeq	XM_944290.1	ILMN_34080	KIAA0492	XM_944290.1	XM_944290.1		57238	88952588	XM_944290.1	KIAA0492	XP_949383.1	ILMN_1745841	0002480309	A	6138	CAACTTAAGTTGAGTACAGTGGCTCAAGCCTGTAATCCTAGCACTTTAGG				1q25.1a	PREDICTED: Homo sapiens KIAA0492 protein (KIAA0492), mRNA.					
Homo sapiens	RefSeq	NM_006188.3	ILMN_184025	OCM2	NM_006188.3	NM_006188.3		4951	148277110	NM_006188.3	OCM2	NP_006179.2	ILMN_3240349	0006940239	S	98	CGTCAGGCCTCTCCAAGATGTCAGCCAGTCAGGTGAAGGATGTTTTCCGG	7	-	97617774-97617823	7q21.3d	Homo sapiens oncomodulin 2 (OCM2), mRNA.				OCM	OCM
Homo sapiens	RefSeq	NM_001080478.1	ILMN_175133	LRRC14B	NM_001080478.1	NM_001080478.1		389257	122937350	NM_001080478.1	LRRC14B	NP_001073947.1	ILMN_2241252	0006280484	I	1413	TGCTGCGGGCTGACCGAGAGGACATCCAAGTCTCCACACCTCTCTTTGGA	5	+	195308-195357	5p15.33e	Homo sapiens leucine rich repeat containing 14B (LRRC14B), mRNA.					
Homo sapiens	RefSeq	NM_198992.1	ILMN_29420	SYT10	NM_198992.2	NM_198992.2		341359	142375410	NM_198992.2	SYT10	NP_945343.1	ILMN_1731958	0000620288	S	3027	CCCAGGCCTCCAGTCCTTGCATGAAAGGCATTTGCCTTCATAAGGATCAA	12	-	33528557-33528606	12p11.1b	Homo sapiens synaptotagmin X (SYT10), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC119436; MGC119437	MGC119436; MGC119437
Homo sapiens	RefSeq	XM_001713781.1	ILMN_339149	LOC100134294	XM_001713781.1	XM_001713781.1		100134294	169217812	XM_001713781.1	LOC100134294	XP_001713833.1	ILMN_3238960	0006510167	S	251	AGTGGGTGGTGTCAGCAGGTCACTGCTACAAGCCCCACATCCAGGTGAGA					PREDICTED: Homo sapiens hypothetical protein LOC100134294 (LOC100134294), mRNA.					
Homo sapiens	RefSeq	NM_016643.1	ILMN_4259	ZNF771	NM_016643.2	NM_016643.2		51333	141803450	NM_016643.2	ZNF771	NP_057727.1	ILMN_1794753	0002320519	S	1321	TTCGGCAGAGCTCCAGTGAGCAAGGCACGACCCTCAGATCTCAGTCTAGT	16	+	30337658-30337707	16p11.2c	Homo sapiens zinc finger protein 771 (ZNF771), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DSC43	DSC43
Homo sapiens	RefSeq	XM_001714593.1	ILMN_340866	LOC100128934	XM_001714593.1	XM_001714593.1		100128934	169194766	XM_001714593.1	LOC100128934	XP_001714645.1	ILMN_3259909	0002680152	M	36	GGCCCACATTGTCCTGGCCGATGCAGTTGAGAGGGAGAAGCAAATTGACC				10q11.21a	PREDICTED: Homo sapiens similar to FXYD domain-containing ion transport regulator 6 (LOC100128934), mRNA.					
Homo sapiens	RefSeq	NM_006834.2	ILMN_784	RAB32	NM_006834.2	NM_006834.2		10981	20127508	NM_006834.2	RAB32	NP_006825.1	ILMN_2115434	0002190128	S	848	CCAGTGTTGCTGATATATGGCTTCTGCTTCTCTTGTGTGTGCCTCAGCTC	6	+	146917424-146917434:146917435-146917473	6q24.3b	Homo sapiens RAB32, member RAS oncogene family (RAB32), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_138924.1	ILMN_22650	GAMT	NM_138924.1	NM_138924.1		2593	20336211	NM_138924.1	GAMT	NP_620279.1	ILMN_1764355	0006620474	I	669	CATGGGTCTCCAGGAAGTGACCTTGGATGGGGGTGGGAAGGGGCTGCTGG	19	-	1398843-1398892	19p13.3i	Homo sapiens guanidinoacetate N-methyltransferase (GAMT), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8651275] [evidence EXP]	The chemical reactions and pathways resulting in the formation of creatine (N-(aminoiminomethyl)-N-methylglycine), a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle [goid 6601] [pmid 9325156] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8547310] [evidence TAS]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [pmid 8651275] [evidence EXP]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [pmid 9325156] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + guanidinoacetate = S-adenosyl-L-homocysteine + creatine [goid 30731] [evidence IEA]	TP53I2; PIG2	TP53I2; PIG2
Homo sapiens	RefSeq	NM_003934.1	ILMN_174872	FUBP3	NM_003934.1	NM_003934.1		8939	100816391	NM_003934.1	FUBP3	NP_003925.1	ILMN_2353033	0002370494	A	2483	GTGCTCGTGTGTTTAGCCTACGTTTTTCTCATGCCTCCATTACCAGTTGC	9	+	132502886-132502935	9q34.11e-q34.12a	Homo sapiens far upstream element (FUSE) binding protein 3 (FUBP3), mRNA. XM_945904 XM_945906 XM_945907	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8940189] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 8940189] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 8940189] [evidence IDA]	FBP3	FBP3
Homo sapiens	RefSeq	NM_000067.1	ILMN_28750	CA2	NM_000067.1	NM_000067.1		760	4557394	NM_000067.1	CA2	NP_000058.1	ILMN_2199439	0002060674	S	1111	AGTACCTTGACTTTGTTCACAGCATGTAGGGTGATGAGCACTCACAATTG	8	+	86580533-86580582	8q21.2b	Homo sapiens carbonic anhydrase II (CA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 114507] [evidence IDA]	The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The directed movement of carbon dioxide (CO2) into, out of, within or between cells [goid 15670] [evidence IEA]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [evidence IEA]	Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [pmid 1928091] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 3151020] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Car2; CA-II; CAII; CA II	Car2; CA-II; CAII; CA II
Homo sapiens	RefSeq	NM_000067.1	ILMN_28750	CA2	NM_000067.1	NM_000067.1		760	4557394	NM_000067.1	CA2	NP_000058.1	ILMN_1662795	0000870630	S	1004	GACTAGACCAATTGTCATGCTTGACACAACTGCTGTGGCTGGTTGGTGCT	8	+	86580426-86580475	8q21.2b	Homo sapiens carbonic anhydrase II (CA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 114507] [evidence IDA]	The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The directed movement of carbon dioxide (CO2) into, out of, within or between cells [goid 15670] [evidence IEA]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [evidence IEA]	Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [pmid 1928091] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 3151020] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Car2; CA-II; CAII; CA II	Car2; CA-II; CAII; CA II
Homo sapiens	RefSeq	XM_001722247.1	ILMN_350584	LOC100129513	XM_001722247.1	XM_001722247.1		100129513	169216544	XM_001722247.1	LOC100129513	XP_001722299.1	ILMN_3270993	0006020500	M	256	CCTTTCTCCTTACAGAAGAATGTGCTCTTAAAGGGAGAAAAAGCAAATAC	X	-	583365-583414		PREDICTED: Homo sapiens similar to PRO0756 (LOC100129513), mRNA.					
Homo sapiens	RefSeq	NM_198969.1	ILMN_25081	AES	NM_198969.1	NM_198969.1		166	39812018	NM_198969.1	AES	NP_945320.1	ILMN_1707958	0006660491	I	113	TCAGCAAGAACCACCGCCCAGCCAGAGCCAAGGTCACAGAGCACGTCCGT	19	-	3062802-3062851	19p13.3f	Homo sapiens amino-terminal enhancer of split (AES), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8365415] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9809752] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11390640] [evidence IPI]	AES-2; ESP1; GRG5; GRG; TLE5; AES-1	AES-2; ESP1; GRG5; GRG; TLE5; AES-1
Homo sapiens	RefSeq	NM_000676.2	ILMN_25434	ADORA2B	NM_000676.2	NM_000676.2		136	22907046	NM_000676.2	ADORA2B	NP_000667.1	ILMN_1703946	0002060040	S	1423	CACAAGGAAATGGACTGCCTCTCTTGAGCACTTCCCTGGAGCTACCACGT	17	+	15819473-15819522	17p12a	Homo sapiens adenosine A2b receptor (ADORA2B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7558011] [evidence TAS]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 10101031] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10101031] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7558011] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 8022409] [evidence TAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 10101031] [evidence TAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 7836474] [evidence TAS]	Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	ADORA2	ADORA2
Homo sapiens	RefSeq	XM_941359.1	ILMN_137404	LOC652044	XM_941359.1	XM_941359.1		652044	88999126	XM_941359.1	LOC652044	XP_946452.1	ILMN_1725425	0002000706	S	2471	GTGGAGGGGTTCCTGGAAGGAAGCAGATGGGCACAGGGAGGAGAAGAATG					PREDICTED: Homo sapiens hypothetical protein LOC652044 (LOC652044), mRNA.					
Homo sapiens	Unigene	Hs.583274	ILMN_135455	HS.583274	Hs.583274		Hs.583274		83126670	DB337233			ILMN_1894412	0002470010	S	212	TGCACAGTGGGGGCTGTTGACTGAAACACCTGCACATGGCCTCACCAGCA	7	+	67960684-67960733		DB337233 TESTI2 Homo sapiens cDNA clone TESTI2018250 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003681.3	ILMN_24569	PDXK	NM_003681.4	NM_003681.4		8566	148235211	NM_003681.4	PDXK	NP_003672.1	ILMN_1672504	0005890131	S	7250	GGCCCTGCTTGTGCCATGTGGATGTTTGTGAGCCTCGGTCCTACAGCACT	21	+	44006485-44006534	21q22.3c	Homo sapiens pyridoxal (pyridoxine, vitamin B6) kinase (PDXK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds [goid 8615] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10930737] [evidence IDA]; The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds [goid 8615] [evidence IEA]; The chemical reactions and pathways involving any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate [goid 42816] [pmid 17766369] [evidence IC ]; The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6 [goid 42823] [pmid 9099727] [evidence IDA]; The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6 [goid 42823] [pmid 10987144] [evidence IDA]; The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6 [goid 42823] [pmid 17766369] [evidence IDA]	Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate [goid 8478] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 17766369] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16600635] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 17766369] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10987144] [evidence IDA]; Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate [goid 8478] [pmid 9099727] [evidence IDA]; Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate [goid 8478] [pmid 10987144] [evidence IDA]; Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate [goid 8478] [pmid 17766369] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [pmid 16600635] [evidence IDA]; Interacting selectively with potassium (K+) ions [goid 30955] [pmid 9252787] [evidence IDA]; Interacting selectively with potassium (K+) ions [goid 30955] [pmid 17766369] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [pmid 17766369] [evidence IDA]; Interacting selectively with sodium ions (Na+) [goid 31402] [pmid 9252787] [evidence IDA]; Interacting selectively with lithium ions (Li+) [goid 31403] [pmid 9252787] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16600635] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 17766369] [evidence IDA]	PKH; MGC52346; FLJ31940; MGC15873; C21orf97; DKFZp566A071; MGC31754; PRED79; FLJ37311; PNK; C21orf124	PKH; C21orf97; PNK
Homo sapiens	RefSeq	NR_030594.1	ILMN_388076	MIR541	NR_030594.1	NR_030594.1		100126308	262206038	NR_030594.1	MIR541		ILMN_3310060	0001400647	S	33	TCCAAAGTTCACAGAATGGGTGGTGGGCACAGAATCTGGACTCTGCTTGT				14q32.31a	Homo sapiens microRNA 541 (MIR541), microRNA.					
Homo sapiens	RefSeq	NM_001024613.1	ILMN_21145	FEZF1	NM_001024613.1	NM_001024613.1		389549	66912165	NM_001024613.1	FEZF1	NP_001019784.1	ILMN_1813585	0000050528	S	1326	CAGGAACTTTGACCTCAAGAAGCATGTCCGCAAGCTGCACGACAGCAGCC	7	-	121729435-121729484	7q31.32a	Homo sapiens FEZ family zinc finger 1 (FEZF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF312B	ZNF312B
Homo sapiens	RefSeq	NM_032036.2	ILMN_19102	IFI27L2	NM_032036.2	NM_032036.2		83982	50511937	NM_032036.2	IFI27L2	NP_114425.1	ILMN_1740319	0001940274	S	350	CCCAGCTGAACCCGAGGCTAAAGAAGATGAGGCAAGAGAAAATGTACCCC	14	-	94594185-94594234	14q32.13a	Homo sapiens interferon, alpha-inducible protein 27-like 2 (IFI27L2), mRNA.				TLH29; MGC44913	TLH29; MGC44913
Homo sapiens	RefSeq	NM_032036.2	ILMN_19102	IFI27L2	NM_032036.2	NM_032036.2		83982	50511937	NM_032036.2	IFI27L2	NP_114425.1	ILMN_3238560	0006940561	S	282	AACATCCTCCTGGCCTCTGTTGGGTCAGTGTTGGGGGCCTGCTTGGGGAA	14	-	94594253-94594302	14q32.13a	Homo sapiens interferon, alpha-inducible protein 27-like 2 (IFI27L2), mRNA.				TLH29; MGC44913	TLH29; MGC44913
Homo sapiens	Unigene	Hs.494932	ILMN_96725	HS.494932	Hs.494932		Hs.494932		31811550	CD642056			ILMN_1898771	0002030348	S	670	CTGTGCTAGACATGAGGTCTATGGACTTTCAGAGCACAGTGCTGTGCCTG	14	+	22086455-22086462:22086465-22086473:22086476-22086483:22086489-22086496:22086499-22086502		AGENCOURT_14538823 NIH_MGC_191 Homo sapiens cDNA clone IMAGE:30418790 5, mRNA sequence					
Homo sapiens	RefSeq	NR_004379.1	ILMN_351533	SNORD96B	NR_004379.1	NR_004379.1		692226	161086999	NR_004379.1	SNORD96B		ILMN_3247008	0006380491	S	14	GACGACATTGTCAGCCAATCCCCATGTGGTAGTGAGGACATGTCCTGCAG	X	-	109468225-109468274		Homo sapiens small nucleolar RNA, C/D box 96B (SNORD96B), small nucleolar RNA.				U96b	U96b
Homo sapiens	RefSeq	NM_005359.3	ILMN_20018	SMAD4	NM_005359.3	NM_005359.3		4089	34147555	NM_005359.3	SMAD4	NP_005350.1	ILMN_1741477	0001030289	S	2763	GCAGCGTCACTCTACCTAATGTCTCACTGTTCTGCAAAGGTGGCAATGCT	18	+	46859706-46859755	18q21.2a	Homo sapiens SMAD family member 4 (SMAD4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11121043] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10549282] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 12374795] [evidence IPI]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9311995] [evidence EXP]	Branching of the ureteric bud [goid 1658] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 12411310] [evidence IMP]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins [goid 7183] [pmid 10823886] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [pmid 8774881] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 8774881] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]; Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta2 [goid 32909] [pmid 12411310] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 8774881] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule [goid 51098] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8774881] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 10823886] [evidence IDA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 8774881] [evidence IPI]	DPC4; MADH4; JIP	DPC4; MADH4; JIP
Homo sapiens	RefSeq	NM_144781.1	ILMN_16269	PDCD2	NM_144781.1	NM_144781.1		5134	21735593	NM_144781.1	PDCD2	NP_659005.1	ILMN_1758915	0004010546	I	1668	CTGAAGACTGCCTGGAAGGGGCCGCGCGTGTGTTCATGCCTATACGATAA	6	-	170891164-170891213	6q27f	Homo sapiens programmed cell death 2 (PDCD2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 7606924] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP8; MGC12347; ZMYND7	RP8; MGC12347; ZMYND7
Homo sapiens	RefSeq	NM_018844.2	ILMN_24686	BCAP29	NM_018844.2	NM_018844.2		55973	56549090	NM_018844.2	BCAP29	NP_061332.2	ILMN_2342084	0002690273	A	282	TACCATTGAGAAGAGCTCCACCAGCAGACCTGATGCCTATGAACACACAC	7	+	107021673-107021722	7q22.3c	Homo sapiens B-cell receptor-associated protein 29 (BCAP29), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	DKFZp686M2086; BAP29	DKFZp686M2086; BAP29
Homo sapiens	RefSeq	NM_006431.2	ILMN_5281	CCT2	NM_006431.2	NM_006431.2		10576	57165416	NM_006431.2	CCT2	NP_006422.1	ILMN_1679382	0007100288	S	1471	AGACCTGGTGGCACAGCTCAGGGCTGCTCACAGTGAAGGCAATACCACTG	12	+	68278410-68278459	12q15c	Homo sapiens chaperonin containing TCP1, subunit 2 (beta) (CCT2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11532003] [evidence NAS]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 11532003] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 11532003] [evidence NAS]	PRO1633; CCT-beta; CCTB; MGC142076; TCP-1-beta; MGC142074; 99D8.1	PRO1633; CCT-beta; CCTB; MGC142076; TCP-1-beta; MGC142074; 99D8.1
Homo sapiens	RefSeq	XR_036903.1	ILMN_340516	LOC100129708	XR_036903.1	XR_036903.1		100129708	169217057	XR_036903.1	LOC100129708		ILMN_3259553	0003290201	M	548	TCCTGCTGTGTGATTGCAGTGAAGAGCTTGCGTTCCTCCTAGTAGTGGCT				Xp11.22b	PREDICTED: Homo sapiens misc_RNA (LOC100129708), miscRNA.					
Homo sapiens	RefSeq	NM_016575.1	ILMN_20677	NT5DC3	NM_016575.1	NM_016575.1		51559	7706748	NM_016575.1	NT5DC3	NP_057659.1	ILMN_1756049	0006330348	I	6735	CCTGCACGCCATTCTCCACCTCAGTATCTGCTTTCGGGGAACCCAACCTG	12	-	102690449-102690498	12q23.3a	Homo sapiens 5'-nucleotidase domain containing 3 (NT5DC3), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	TU12B1-TY; FLJ11266; TU12B1TY; GNN	TU12B1-TY; FLJ11266; TU12B1TY; GNN
Homo sapiens	RefSeq	NM_002571.2	ILMN_9138	PAEP	NM_002571.2	NM_002571.2		5047	65507518	NM_002571.2	PAEP	NP_002562.2	ILMN_1748004	0001580201	A	581	TTTCTAGCTCACCTCCGCCTCCAGGAAGACCAGACTCCCACCCTTCCACA	9	+	137597462-137597468:137598220-137598262	9q34.3b	Homo sapiens progestagen-associated endometrial protein (PAEP), transcript variant 2, mRNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 3194393] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC142288; GdS; GD; PP14; PEP; PAEG; GdF; MGC138509; GdA	MGC142288; GdS; GD; PP14; PEP; PAEG; GdF; MGC138509; GdA
Homo sapiens	RefSeq	XR_036921.1	ILMN_343735	LOC399965	XR_036921.1	XR_036921.1		399965	169203192	XR_036921.1	LOC399965		ILMN_3209399	0003520333	A	1367	CTGGAGAACAGCCTGAGGTGGGTGGAGGCCCGCTATGCCATGCAAATGGA				11q24.2b	PREDICTED: Homo sapiens misc_RNA (LOC399965), miscRNA.					
Homo sapiens	RefSeq	NM_004314.1	ILMN_19895	ART1	NM_004314.1	NM_004314.1		417	4757783	NM_004314.1	ART1	NP_004305.1	ILMN_1807913	0003710114	S	1252	GGGGACTGAACCTTACCCAGGGCTGTAGGAGTGAGACTCTGAATAAAGGG	11	+	3642162-3642211	11p15.4d	Homo sapiens ADP-ribosyltransferase 1 (ART1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9119374] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7947688] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]; The lipid bilayer surrounding the sarcoplasmic reticulum [goid 33017] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 7947688] [evidence TAS]	Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [pmid 7947688] [evidence TAS]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	RT6; CD296; ART2; MGC133217	RT6; CD296; ART2; MGC133217
Homo sapiens	Unigene	Hs.552087	ILMN_110821	HS.552087	Hs.552087		Hs.552087		38382805	BC062365			ILMN_1864685	0002070053	S	1089	CATGATGGGGAAGCAGAGGGCATAGTGTGGTTTTGTGGGACTTGTTCATG	5	-	168021602-168021651		Homo sapiens cDNA clone IMAGE:5922621, partial cds					
Homo sapiens	RefSeq	NM_015420.4	ILMN_7024	WDSOF1	NM_015420.5	NM_015420.5		25879	142347189	NM_015420.5	WDSOF1	NP_056235.3	ILMN_1744611	0006200470	S	1976	CGACGAAAGGAAGTGAATCGTATTAAACACAGCAAGCCTGGATCTGTGCC	8	+	104523015-104523022:104524199-104524240	8q22.3c	Homo sapiens WD repeats and SOF1 domain containing (WDSOF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		MGC126859; HSPC064; MGC138247; DKFZP564O0463; Gm83	MGC126859; HSPC064; MGC138247; DKFZP564O0463; Gm83
Homo sapiens	RefSeq	NR_002996.2	ILMN_179316	SNORA80	NR_002996.2	NR_002996.2		677846	95007010	NR_002996.2	SNORA80		ILMN_3238554	0005260280	S	62	AGCAAACTGTAGCCCTGAACCATTGCCTGGCCTCTGTTCCCGTAGGCTGC	21	-	33749520-33749569	21q22.11b	Homo sapiens small nucleolar RNA, H/ACA box 80 (SNORA80), small nucleolar RNA.				ACA67	ACA67
Homo sapiens	RefSeq	NM_001032999.1	ILMN_42079	CBFA2T2	NM_001032999.2	NM_001032999.2		9139	89353293	NM_001032999.2	CBFA2T2	NP_001028171.1	ILMN_1752404	0006400204	I	6	GTGGTGTCTGGTTAGCTCGGCGGCTGCAGATCTCGCGGCGACGCCTGCGA	20	+	31541594-31541643	20q11.22a	Homo sapiens core-binding factor, runt domain, alpha subunit 2; translocated to, 2 (CBFA2T2), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16966434] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZMYND3; DKFZp313F2116; MTGR1; EHT	MTGR1; EHT; DKFZp313F2116; ZMYND3
Homo sapiens	Unigene	Hs.559609	ILMN_113747	HS.559609	Hs.559609		Hs.559609		16553093	AK057402			ILMN_1887644	0004880048	S	1866	TGCATGAAGAAAAGCAGCCGGGCAGGAGAGGGACAGGAAAATCTCCCATC	8	+	135963096-135963145		Homo sapiens cDNA FLJ32840 fis, clone TESTI2003321					
Homo sapiens	Unigene	Hs.580797	ILMN_132978	HS.580797	Hs.580797		Hs.580797		12402397	BF996074			ILMN_1900734	0004010014	S	73	ACCAACTCAAAGGCTGTCTCTAAAGAAAAACATAGGCCGGGCGCGGTGGC	20	-	32502445-32502445:32505881-32505929		MR1-GN0172-061100-005-h03 GN0172 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_940854.1	ILMN_40023	KCTD2	XM_940854.1	XM_940854.1		23510	89043056	XM_940854.1	KCTD2	XP_945947.1	ILMN_1769235	0006350424	I	1133	CTTTAACCAGCTCTCAAACGGGCTGAGTTTGGGGACAGGAGCGTGGGTGG				17q25.1c	PREDICTED: Homo sapiens potassium channel tetramerisation domain containing 2 (KCTD2), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_943555.1	ILMN_162839	LOC728229	XM_001128450.1	XM_001128450.1		728229	113429282	XM_001128450.1	LOC728229	XP_001128450.1	ILMN_1785919	0005810289	I	1744	GGCCCCACTCAGACGCCAAGGTGCCTCCCGCCTCTCCTCCCCCAGACCTG	22	+	18759537-18759586	22q11.21d	PREDICTED: Homo sapiens hypothetical protein LOC728229, transcript variant 3 (LOC728229), mRNA.					
Homo sapiens	RefSeq	XM_938510.1	ILMN_33945	LOC649429	XM_938510.1	XM_938510.1		649429	89059223	XM_938510.1	LOC649429	XP_943603.1	ILMN_1659693	0000070326	S	194	TGAGGCATGAGAGTGCCATGGGCCCCTCCGCTGACTCTGTCTTCCCCTAG					PREDICTED: Homo sapiens similar to glutathione S-transferase, theta 3 (LOC649429), mRNA.					
Homo sapiens	RefSeq	NM_007279.2	ILMN_16120	U2AF2	NM_007279.2	NM_007279.2		11338	60279266	NM_007279.2	U2AF2	NP_009210.1	ILMN_1768930	0001690114	A	3039	CCCGTGGCCCCTGCCCCTCTCCTACTCTCTGTGGCAGTTTCATATTTGCT	19	+	56185990-56186039	19q13.42c	Homo sapiens U2 small nuclear RNA auxiliary factor 2 (U2AF2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9731529] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 9731529] [evidence IC ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9447963] [evidence IPI]	U2AF65	U2AF65
Homo sapiens	RefSeq	NM_175910.4	ILMN_15703	ZNF493	NM_175910.4	NM_175910.4		284443	40255231	NM_175910.4	ZNF493	NP_787106.3	ILMN_1667858	0004280075	S	2750	GTGAGGAATGTGGCAAAGCCTTTAGCCTGCCCCTCCAATTTACTGCACAT	19	+	21400169-21400218	19p12d	Homo sapiens zinc finger protein 493 (ZNF493), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ36504	FLJ36504
Homo sapiens	RefSeq	NM_001152.1	ILMN_25647	SLC25A5	NM_001152.1	NM_001152.1		292	4502098	NM_001152.1	SLC25A5	NP_001143.1	ILMN_1774062	0006550673	S	881	CAAGGGTGCATGGTCCAATGTTCTCAGAGGCATGGGTGGTGCTTTTGTGC	X	+	118488963-118489012	Xq24c	Homo sapiens solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 (SLC25A5), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 10620603] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2168878] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 2168878] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of adenine, 6-aminopurine, from one side of a membrane to the other [goid 15207] [pmid 2168878] [evidence TAS]	T3; 2F1; ANT2; T2	T3; 2F1; ANT2; T2
Homo sapiens	RefSeq	NM_016459.2	ILMN_8636	PACAP	NM_016459.2	NM_016459.2		51237	24475968	NM_016459.2	PACAP	NP_057543.1	ILMN_1662878	0000940673	S	925	GGTGCTTGTGGGGCTGGGAGTGCAGACATTGGTGTTTCTGCTGATGTCCC	5	-	138751087-138751093:138751094-138751136	5q31.2d	Homo sapiens proapoptotic caspase adaptor protein (PACAP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		FLJ32987; MGC29506	FLJ32987; MGC29506
Homo sapiens	RefSeq	NM_006898.4	ILMN_874	HOXD3	NM_006898.4	NM_006898.4		3232	23510372	NM_006898.4	HOXD3	NP_008829.3	ILMN_1798076	0004670689	S	2025	AGGCCGTGGGGGCCACATTTCACCTCCTTAGTCCCCCTGGTCTGAACTAG	2	+	176745798-176745847	2q31.1h	Homo sapiens homeobox D3 (HOXD3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX4; MGC10470; Hox-4.1; HOX1D; HOX4A	HOX4; MGC10470; Hox-4.1; HOX1D; HOX4A
Homo sapiens	RefSeq	XR_037732.1	ILMN_349631	LOC390806	XR_037732.1	XR_037732.1		390806	169211467	XR_037732.1	LOC390806		ILMN_3216080	0002650739	A	36	TGGGCGAAGCCAAGGCGGTTTCCGAGGGCTGTCTAGCGCCTGCCAATCAT				17q23.3a	PREDICTED: Homo sapiens misc_RNA (LOC390806), miscRNA.					
Homo sapiens	RefSeq	NM_138425.2	ILMN_23505	C12ORF57	NM_138425.2	NM_138425.2		113246	34147536	NM_138425.2	C12orf57	NP_612434.1	ILMN_1812191	0003130291	S	205	TAACGCCTGCAACGACATGGGTAAGATGCTGCAATTCGTGCTGCCCGTGG	12	+	6923970-6924019	12p13.31d	Homo sapiens chromosome 12 open reading frame 57 (C12orf57), mRNA.				C10; GRCC10	C10; GRCC10
Homo sapiens	RefSeq	NM_000266.1	ILMN_22946	NDP	NM_000266.1	NM_000266.1		4693	4557788	NM_000266.1	NDP	NP_000257.1	ILMN_1794803	0002320598	S	1725	TGGTGGCCTGGCTTGTCTTCTGAACGTTTGGTTCAAATGTGTTTTGGTCC	X	-	43693024-43693073	Xp11.3c	Homo sapiens Norrie disease (pseudoglioma) (NDP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8298646] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vacuole [goid 7033] [pmid 10484772] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8298646] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8298646] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8252044] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10484772] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 8298646] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8298646] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8298646] [evidence TAS]	EVR2; ND; FEVR	ND; EVR2; FEVR
Homo sapiens	RefSeq	NM_139279.3	ILMN_1677	MCFD2	NM_139279.3	NM_139279.3		90411	46852158	NM_139279.3	MCFD2	NP_644808.1	ILMN_1761808	0002640576	S	3583	ATTAGGAATGTCAGGACTTTATCAGCAGGGGTAAAACTACCACCTGGCCT	2	-	47129504-47129553	2p21a	Homo sapiens multiple coagulation factor deficiency 2 (MCFD2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp686G21263; LMAN1IP; F5F8D; SDNSF	DKFZp686G21263; LMAN1IP; F5F8D; SDNSF
Homo sapiens	RefSeq	NM_139279.3	ILMN_1677	MCFD2	NM_139279.3	NM_139279.3		90411	46852158	NM_139279.3	MCFD2	NP_644808.1	ILMN_2202790	0006330672	S	3822	GAGAAGAAGCAGCAGATTGTAATTTGGTTTATTGGATGTGATGGACGTTC	2	-	47129265-47129314	2p21a	Homo sapiens multiple coagulation factor deficiency 2 (MCFD2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp686G21263; LMAN1IP; F5F8D; SDNSF	DKFZp686G21263; LMAN1IP; F5F8D; SDNSF
Homo sapiens	RefSeq	NM_033212.2	ILMN_12942	CCDC102A	NM_033212.2	NM_033212.2		92922	34147459	NM_033212.2	CCDC102A	NP_149989.1	ILMN_1796762	0001660681	S	2215	GGAGCCCCACCCTGGGCTGCCTCTCTAGGCTTCGCTGTTCATCATACAAT	16	-	56103755-56103804	16q13c	Homo sapiens coiled-coil domain containing 102A (CCDC102A), mRNA.				MGC13119; MGC10992	MGC13119; MGC10992
Homo sapiens	RefSeq	NM_001033083.1	ILMN_12511	PBLD	NM_001033083.1	NM_001033083.1		64081	74316008	NM_001033083.1	PBLD	NP_001028255.1	ILMN_1760748	0002370661	I	1096	TCACCCTTAAAGATCCTCCACCCCAAACAGCCTTCACCTCTGCCTCCCCC	10	-	70044916-70044965	10q21.3d	Homo sapiens phenazine biosynthesis-like protein domain containing (PBLD), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FLJ14767; MAWDBP; FLJ35507; MAWBP	FLJ14767; MAWDBP; FLJ35507; MAWBP
Homo sapiens	RefSeq	NM_001033083.1	ILMN_12511	PBLD	NM_001033083.1	NM_001033083.1		64081	74316008	NM_001033083.1	PBLD	NP_001028255.1	ILMN_1789653	0005570050	A	677	CCAAAAGCTCCTCGTCCGCCTCAGTGACGTTTACAACAGGTCGTTTCTGG	10	-	70048407-70048418:70048688-70048725	10q21.3d	Homo sapiens phenazine biosynthesis-like protein domain containing (PBLD), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FLJ14767; MAWDBP; FLJ35507; MAWBP	FLJ14767; MAWDBP; FLJ35507; MAWBP
Homo sapiens	RefSeq	NM_001033083.1	ILMN_12511	PBLD	NM_001033083.1	NM_001033083.1		64081	74316008	NM_001033083.1	PBLD	NP_001028255.1	ILMN_2304404	0004210164	A	779	GGTGAAAGGGCTTATTCTTACCCTTAAAGGAGAGCCTGGTGGGCAGACCC	10	-	70048305-70048354	10q21.3d	Homo sapiens phenazine biosynthesis-like protein domain containing (PBLD), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FLJ14767; MAWDBP; FLJ35507; MAWBP	FLJ14767; MAWDBP; FLJ35507; MAWBP
Homo sapiens	RefSeq	NM_001039112.2	ILMN_10015	FER1L6	NM_001039112.2	NM_001039112.2		654463	119120883	NM_001039112.2	FER1L6	NP_001034201.2	ILMN_3247266	0003870377	S	5857	CATGCATGGCACTGTGCTGAGTGCTAAGGGGACAGATCAACCCTTCTTGG	8	+	125083864-125083872:125084588-125084628	8q24.13c	Homo sapiens fer-1-like 6 (C. elegans) (FER1L6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C8ORFK23	C8ORFK23
Homo sapiens	RefSeq	NM_052866.2	ILMN_7160	ADAMTSL1	NM_052866.3	NM_052866.3		92949	154275764	NM_052866.3	ADAMTSL1	NP_443098.3	ILMN_1705250	0005890326	I	1757	GCAGTGTCTCACTGGTTGTAGCTTTCATGGGTTCTGAACTAAGTGTAATC	9	+	18636008-18636015:18639252-18639293	9p22.2a-p22.1b	Homo sapiens ADAMTS-like 1 (ADAMTSL1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	FLJ46891; C9orf94; MGC118803; FLJ41032; MGC118805; MGC40193; ADAMTSR1; FLJ35283; DKFZp686L03130	MGC40193; ADAMTSR1
Homo sapiens	RefSeq	NM_052866.2	ILMN_7160	ADAMTSL1	NM_052866.3	NM_052866.3		92949	154275764	NM_052866.3	ADAMTSL1	NP_443098.3	ILMN_1722621	0006180209	A	1393	CACCCCTAAGATGCCCATCGCGCAGCCCTGCAACATTTTTGACTGCCCTA	9	+	18622304-18622353	9p22.2a-p22.1b	Homo sapiens ADAMTS-like 1 (ADAMTSL1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	FLJ46891; C9orf94; MGC118803; FLJ41032; MGC118805; MGC40193; ADAMTSR1; FLJ35283; DKFZp686L03130	MGC40193; ADAMTSR1
Homo sapiens	RefSeq	NM_013436.3	ILMN_7814	NCKAP1	NM_013436.3	NM_013436.3		10787	45505152	NM_013436.3	NCKAP1	NP_038464.1	ILMN_2322552	0005960274	A	3386	TTGCCTGCCTTCTCATGGTGTTTGTGGCAGTTTCTTTGCCAACACTGGCC	2	-	183793547-183793596	2q32.1a	Homo sapiens NCK-associated protein 1 (NCKAP1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10673335] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 10673335] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11418237] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15294869] [evidence IPI]	FLJ11291; NAP125; NAP1; KIAA0587; HEM2; MGC8981	FLJ11291; NAP125; NAP1; KIAA0587; HEM2; MGC8981
Homo sapiens	RefSeq	NM_024859.1	ILMN_26889	FLJ21687	NM_024859.1	NM_024859.1		79917	13376285	NM_024859.1	FLJ21687	NP_079135.1	ILMN_1770102	0002100047	S	2551	CCCCAACTGTATATGTTGCACTGTGCTAGGTACTGTGGAGATGCTGGAGG	X	+	48911326-48911375	Xp11.23b	Homo sapiens PDZ domain containing, X chromosome (FLJ21687), mRNA.				JM10; MGC138889	JM10; MGC138889
Homo sapiens	RefSeq	XM_001723586.1	ILMN_335864	LOC100129856	XM_001723586.1	XM_001723586.1		100129856	169171972	XM_001723586.1	LOC100129856	XP_001723638.1	ILMN_3254046	0005870717	M	133	CCGCACCGGTGACAAGCTAATGAACGCTACTCTGCGCGGCTCCGCCATCC				7q34b	PREDICTED: Homo sapiens similar to hCG2040214 (LOC100129856), mRNA.					
Homo sapiens	RefSeq	NM_005601.3	ILMN_15943	NKG7	NM_005601.3	NM_005601.3		4818	49574503	NM_005601.3	NKG7	NP_005592.1	ILMN_1682993	0002450427	S	616	CTGAGCCTGGGTGCTCACTGTGGCGGTCCCCGTCCTGGCTATGAAACCTT	19	-	56566846-56566895	19q13.33d	Homo sapiens natural killer cell group 7 sequence (NKG7), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8458737] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			GIG1	GIG1
Homo sapiens	Unigene	Hs.555255	ILMN_112237	HS.555255	Hs.555255		Hs.555255		23371365	BU659183			ILMN_1860722	0006200646	S	13	AGCCCATTCTGACTCACTGGGAGGGCCACACCGAACCCCTCGCAGGCTTA	9	-	72224695-72224744		cl44f11.z1 Hembase; Erythroid Precursor Cells (LCB:cl library) Homo sapiens cDNA clone cl44f11 5, mRNA sequence					
Homo sapiens	RefSeq	NM_004579.2	ILMN_8521	MAP4K2	NM_004579.2	NM_004579.2		5871	22035599	NM_004579.2	MAP4K2	NP_004570.2	ILMN_1723625	0006400386	S	2854	TTTCCTTTCTACTCTTTCTGCCAAGAGCCTGCCCCTGCATTTGTCCTGGG	11	-	64556660-64556709	11q13.1b	Homo sapiens mitogen-activated protein kinase kinase kinase kinase 2 (MAP4K2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 8643544] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8643544] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 11784851] [evidence IDA]; The process by which vesicles are directed to specific destination membranes, mediated by microtubules that grow between molecules at the vesicle membrane and target membrane surfaces [goid 6903] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 8643544] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7515885] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 11784851] [evidence IDA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 7477268] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11784851] [evidence IDA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11784851] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11784851] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GCK; RAB8IP; BL44	GCK; RAB8IP; BL44
Homo sapiens	RefSeq	XM_001715717.1	ILMN_340572	LOC651198	XM_001715717.1	XM_001715717.1		651198	169205743	XM_001715717.1	LOC651198	XP_001715769.1	ILMN_3205924	0002940167	A	468	CGGCCATATGAGCATCAAAGCCTATGTCAGCACTTTAATGGGTGTCCCTG	13	-	35728-35777		PREDICTED: Homo sapiens similar to hCG2036706 (LOC651198), mRNA.					
Homo sapiens	RefSeq	XM_001715717.1	ILMN_340572	LOC651198	XM_001715717.1	XM_001715717.1		651198	169205743	XM_001715717.1	LOC651198	XP_001715769.1	ILMN_3282436	0006280717	M	398	TGATCCATGAGTACTACAGCCGAGAGGCCCCCAACCCCATCCACCTCACT	13	-	35798-35847		PREDICTED: Homo sapiens similar to hCG2036706 (LOC651198), mRNA.					
Homo sapiens	RefSeq	NM_001305.3	ILMN_23316	CLDN4	NM_001305.3	NM_001305.3		1364	34335232	NM_001305.3	CLDN4	NP_001296.1	ILMN_2132458	0004210546	S	1497	CGAAGGTGCTGTAAACAGGTTTGGGCAGTGGTGGGGGAGGGGGCCAGAGA	7	+	72884625-72884674	7q11.23b	Homo sapiens claudin 4 (CLDN4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9892664] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9334247] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9334247] [evidence TAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The set of specific processes that generate the ability of an organism to cause disease in another [goid 9405] [pmid 9334247] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9334247] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	WBSCR8; CPER; hCPE-R; CPETR; CPETR1; CPE-R	WBSCR8; CPER; hCPE-R; CPETR; CPETR1; CPE-R
Homo sapiens	Unigene	Hs.537742	ILMN_103473	HS.537742	Hs.537742		Hs.537742		2457819	AA609391			ILMN_1916025	0005870682	S	281	CCTTGGGAGAGAGGGGTAGTAACTGGAAGGAAACACGAGGAGGGCTTCTG	1	-	191701337-191701386		zu71h01.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:743473 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005194.2	ILMN_4674	CEBPB	NM_005194.2	NM_005194.2		1051	28872795	NM_005194.2	CEBPB	NP_005185.2	ILMN_1693014	0000020446	S	1601	GACTGACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTT	20	+	48242383-48242432	20q13.13e	Homo sapiens CCAAT/enhancer binding protein (C/EBP), beta (CEBPB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10821850] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10821850] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [pmid 2112087] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 2112087] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2112087] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45408] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10821850] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	CRP2; TCF5; LAP; IL6DBP; C/EBP-beta; NF-IL6; MGC32080	CRP2; LAP; IL6DBP; C/EBP-beta; TCF5; NF-IL6; MGC32080
Homo sapiens	RefSeq	XM_943434.1	ILMN_138375	UGT2B7	XM_943434.1	XM_943434.1		7364	88980343	XM_943434.1	UGT2B7	XP_948527.1	ILMN_1718833	0006400221	I	529	CTCTGGCAAAGATGGCACTGTGGTGTTTTCTCTGGGGCCAGTTGTGCAAA				4q13.2c	PREDICTED: Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide B7, transcript variant 3 (UGT2B7), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2159463] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 2159463] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]		
Homo sapiens	RefSeq	NM_001025449.1	ILMN_23178	LOC158572	NM_001025449.1	NM_001025449.1		158572	70887648	NM_001025449.1	LOC158572	NP_001020620.1	ILMN_1762545	0001580082	S	356	GAGAGGGGGCCTAAACTACAGGACACACTCCCAAGACCCTTAAGCCCTGG	X	-	49529711-49529718:49529719-49529760	Xp11.23a	Homo sapiens hypothetical protein LOC158572 (LOC158572), mRNA.					
Homo sapiens	RefSeq	NM_003195.4	ILMN_10248	TCEA2	NM_003195.4	NM_003195.4		6919	38505154	NM_003195.4	TCEA2	NP_003186.1	ILMN_2240597	0005290577	I	640	TCGCTGCTCCTGAGGCGATGATGGGCAAGGAAGAGGAGATTGCGCGGATC	20	+	62165093-62165109:62165110-62165142	20q13.33e	Homo sapiens transcription elongation factor A (SII), 2 (TCEA2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [pmid 8566795] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 6354] [pmid 8566795] [evidence NAS]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [pmid 8566795] [evidence NAS]; Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TFIIS	TFIIS
Homo sapiens	RefSeq	NM_015703.3	ILMN_12816	RRP7A	NM_015703.3	NM_015703.3		27341	62751922	NM_015703.3	RRP7A	NP_056518.2	ILMN_1688178	0003130598	I	1102	TCTTGCCTCCACACCCTCCTCTCCAGGACCCTGGATGAATCCGTTCTGTG	22	-	42908623-42908672	22q13.2b	Homo sapiens ribosomal RNA processing 7 homolog A (S. cerevisiae) (RRP7A), mRNA.				MGC150422; BK126B4.3; MGC150423	MGC150422; BK126B4.3; MGC150423
Homo sapiens	RefSeq	NM_002381.3	ILMN_165156	MATN3	NM_002381.4	NM_002381.4		4148	111119013	NM_002381.4	MATN3	NP_002372.1	ILMN_1663171	0002320767	S	1287	TGGGGCCGCATCCTACCACTGTGATTGCTATCCTGGCTACACCTTAAATG	2	-	20196915-20196964	2p24.1d	Homo sapiens matrilin 3 (MATN3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 9350998] [evidence TAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9350998] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 9350998] [evidence TAS]	HOA; EDM5	HOA; EDM5
Homo sapiens	Unigene	Hs.543663	ILMN_107221	HS.543663	Hs.543663		Hs.543663		9864849	AW561143			ILMN_1870097	0003940706	S	58	CATACCCAAGAGTACTGATAGCTGCTGCTTTGAACACAAAGTGATCAGTG	4	+	28544673-28544722		EST00006 Human (activated) smooth muscle cells, DD/RT-PCR products Homo sapiens cDNA clone smag-58, mRNA sequence					
Homo sapiens	RefSeq	XM_497671.2	ILMN_30760	LOC391037	XM_497671.3	XM_497671.3		391037	113408603	XM_497671.3	LOC391037	XP_497671.3	ILMN_1774109	0002100403	A	231	GGAGCGGACAGAGCTCCTGAAAGAAGCCATTGGAGAAGGTAAAGTGACCC	1	-	48404833-48404882	1p33c	PREDICTED: Homo sapiens similar to Butyrophilin subfamily 1 member A1 precursor (BT) (LOC391037), mRNA.					
Homo sapiens	RefSeq	XM_937145.1	ILMN_43569	LOC90342	XM_937145.1	XM_937145.1		90342	88956616	XM_937145.1	LOC90342	XP_942238.1	ILMN_1769752	0006200131	I	3462	TGGCAGTGTGAGGGAGGAGGGTGACTGGGCCTGGGCTAGAGGAAACAGGA				2q11.2a	PREDICTED: Homo sapiens similar to fer-1 like protein 3 (LOC90342), mRNA.					
Homo sapiens	RefSeq	NM_199173.2	ILMN_17038	BGLAP	NM_199173.2	NM_199173.2		632	41152108	NM_199173.2	BGLAP	NP_954642.1	ILMN_1755818	0004830356	S	124	TTTGTGTCCAAGCAGGAGGGCAGCGAGGTAGTGAAGAGACCCAGGCGCTA	1	+	154479179-154479228	1q22d	Homo sapiens bone gamma-carboxyglutamate (gla) protein (osteocalcin) (BGLAP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11856645] [evidence NAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10865224] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 12202187] [evidence NAS]; Any process that modulates the frequency, rate or extent of bone mineralization [goid 30500] [evidence IEA]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [pmid 11856645] [evidence NAS]; Any process that modulates the frequency, rate or extent of bone tissue loss (resorption) [goid 45124] [pmid 10486212] [evidence NAS]; Any process that modulates the frequency, rate or extent of osteoclast differentiation [goid 45670] [pmid 10486212] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The action of a molecule that contributes to the structural integrity of bone [goid 8147] [pmid 12467198] [evidence NAS]; Interacting selectively with hydroxyapatite, the calcium phosphate mineral of formula Ca10(PO4)6(OH)2 found both in rocks of nonorganic origin and as a component of bone and dentine [goid 46848] [pmid 10486212] [evidence NAS]	BGP; PMF1	BGP; PMF1
Homo sapiens	RefSeq	NM_001006940.1	ILMN_21968	ALG3	NM_005787.4	NM_005787.4		10195	55743084	NM_005787.4	ALG3	NP_005778.1	ILMN_1711886	0002650167	A	1287	CCCGCAGCCTTTCCCCAAGAGCACCCAACACAGCAAGAAAGCCCACTGAA	3	-	185442994-185442995:185442996-185443043	3q27.1b	Homo sapiens asparagine-linked glycosylation 3 homolog (S. cerevisiae, alpha-1,3-mannosyltransferase) (ALG3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10581255] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 10581255] [evidence NAS]	Catalysis of the transfer of a mannose residue from GDP-mannose to an oligosaccharide, forming an alpha-1,3-linkage [goid 33] [pmid 10581255] [evidence IDA]; Catalysis of the transfer of an alpha-D-mannosyl residue from dolichyl-phosphate D-mannose into membrane lipid-linked oligosaccharide [goid 4584] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	D16Ertd36e; CDGS4; NOT56L; Not56	D16Ertd36e; CDGS4; NOT56L; Not56
Homo sapiens	RefSeq	NM_001005164.1	ILMN_20660	OR52E2	NM_001005164.1	NM_001005164.1		119678	52353249	NM_001005164.1	OR52E2	NP_001005164.1	ILMN_1708238	0001470044	S	791	GCTTTGGCCGAAATGTGCCCCGCTATATCCATATACTCCTAGCCAATCTC	11	-	5080017-5080066	11p15.4c	Homo sapiens olfactory receptor, family 52, subfamily E, member 2 (OR52E2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NR_002764.1	ILMN_9963	PRO0628	NR_002764.1	NR_002764.1		29053	84872047	NR_002764.1	PRO0628		ILMN_2213834	0005910746	S	736	CATAGAAAGGCTGGCTCAGGAGGGTACTGACTTGCTTTGACTTTGCGGCA	20	+	39100622-39100671	20q12b-q12c	Homo sapiens hypothetical LOC29053 (PRO0628), non-coding RNA.					
Homo sapiens	Unigene	Hs.538134	ILMN_103724	HS.538134	Hs.538134		Hs.538134		9792923	BE551231			ILMN_1915698	0001400681	S	422	GCCAGCATCTGAGAAGAGTGCCCGACTCCATTTCTCTTCCTAATTGAGAC	1	+	36799543-36799592		7b56d05.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3232233 3, mRNA sequence					
Homo sapiens	RefSeq	NM_152341.2	ILMN_20105	PAQR4	NM_152341.2	NM_152341.2		124222	31542755	NM_152341.2	PAQR4	NP_689554.2	ILMN_1660793	0003460132	S	2355	CTTCCATCTGGCTGCACTCCAAGGCCCCCTCTGTCCTTTTCAGAACACAT	16	+	2963395-2963444	16p13.3d	Homo sapiens progestin and adipoQ receptor family member IV (PAQR4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ30002	FLJ30002
Homo sapiens	Unigene	Hs.535592	ILMN_102944	HS.535592	Hs.535592		Hs.535592		6703754	AW297118			ILMN_1859843	0006620193	S	189	CTGGCTTGTGCGATTGAGTGTGCTGAGGCCAGGGGCTCCAAGCATGCAAA	2	+	96841875-96841924		UI-H-BI2-aie-e-08-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2729174 3, mRNA sequence					
Homo sapiens	Unigene	Hs.159049	ILMN_79570	HS.159049	Hs.159049		Hs.159049		6040342	AW085190			ILMN_1895686	0000380273	S	385	CACCTTAAAGGATGCAGCAATAAGGCACCATCTGGGAAGCTGACAGCAGC	7	-	123761584-123761607:123761609-123761634		xe07a06.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2606386 3, mRNA sequence					
Homo sapiens	RefSeq	XM_925787.1	ILMN_43295	LOC653043	XM_925787.1	XM_925787.1		653043	89029257	XM_925787.1	LOC653043	XP_930880.1	ILMN_1667903	0003360632	S	843	TGGGCCGACGTAGCCTTTTCTAGTTCTCTGTGTGGTTCACCCGTTCACCG	9	-	39725944-39725993		PREDICTED: Homo sapiens similar to cell recognition molecule CASPR3 (LOC653043), mRNA.					
Homo sapiens	RefSeq	NM_032025.2	ILMN_28727	EIF2A	NM_032025.3	NM_032025.3		83939	83656780	NM_032025.3	EIF2A	NP_114414.2	ILMN_1733305	0005820068	S	1536	CAGATTTGGCACCTACTCCTGCCCCACAGAGCACACCACGAAACACTGTC	3	+	150299427-150299476	3q25.1b	Homo sapiens eukaryotic translation initiation factor 2A, 65kDa (EIF2A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12133843] [evidence IDA]; Complex of three heterogeneous polypeptide chains, that form a ternary complex with initiator methionyl-tRNA and GTP. This ternary complex binds to free 40S subunit, which subsequently binds the 5' end of mRNA [goid 5850] [pmid 12133843] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [pmid 12133843] [evidence IMP]; The aggregation, arrangement and bonding together of the mature ribosome and of its subunits [goid 42255] [pmid 12133843] [evidence IMP]	Interacting selectively with transfer RNA [goid 49] [pmid 12133843] [evidence IMP]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 12133843] [evidence IMP]; Interacting selectively with any part of a ribosome [goid 43022] [pmid 12133843] [evidence IMP]	MSTP089; MSTP004; EIF-2A; CDA02; MST089	MSTP089; MSTP004; CDA02; MST089
Homo sapiens	RefSeq	XM_925874.1	ILMN_36560	LOC642338	XM_925874.1	XM_925874.1		642338	89040338	XM_925874.1	LOC642338	XP_930967.1	ILMN_1665086	0002640020	S	181	AAAGTATTTTCCTACCTAAACAATATAATAAGATGTTTCTCCAGTTGCAC	16	+	34226591-34226640		PREDICTED: Homo sapiens similar to vomeronasal 1 receptor, C3 (LOC642338), mRNA.					
Homo sapiens	RefSeq	XM_001126190.2	ILMN_171390	LOC730032	XM_001126190.2	XM_001126190.2		730032	169164665	XM_001126190.2	LOC730032	XP_001126190.2	ILMN_3225795	0004640228	A	3999	GGGACCCTGAAAGACCCAAGATTCCCAAGGGCCAGACCAGTTTCCTGCTT				2q21.1c	PREDICTED: Homo sapiens similar to RIKEN cDNA C230030N03 (LOC730032), mRNA.					
Homo sapiens	RefSeq	NM_194327.1	ILMN_26595	GALIG	NM_194327.1	NM_194327.1		81625	34996518	NM_194327.1	GALIG	NP_919308.1	ILMN_1730660	0001660647	S	675	GGCAGGAGCTGAGAAATCCTCTGAGTAGCGGGAAGTGCGGTACAGTCTGG	14	+	54674126-54674138:54674139-54674175	14q22.3a	Homo sapiens galectin-3 internal gene (GALIG), mRNA.					
Homo sapiens	Unigene	Hs.554452	ILMN_111956	HS.554452	Hs.554452		Hs.554452		14293236	BG912760			ILMN_1903120	0002490162	S	646	GCTGCTTTTACTCTGGGGTGGTTATAGCAATGGCGCCTTAGGGCAACCCC	4	-	175795294-175795343		602807977F1 NCI_CGAP_Brn67 Homo sapiens cDNA clone IMAGE:4940250 5, mRNA sequence					
Homo sapiens	RefSeq	NM_004580.3	ILMN_26005	RAB27A	NM_183236.1	NM_183236.1		5873	34485710	NM_183236.1	RAB27A	NP_899059.1	ILMN_1665859	0002680044	A	1537	GAGCAACCAAAGTGGGACTTCTGTCTCCCCGCTATATTCCCATTGCTCTG	15	-	55496977-55497026	15q21.3b	Homo sapiens RAB27A, member RAS oncogene family (RAB27A), transcript variant 4, mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 11266474] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [pmid 11266474] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; Any process by which a melanosome is transported to, and/or maintained in, a specific location within the cell [goid 32400] [evidence IEA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence IEA]; The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a cytotoxic T cell [goid 43316] [evidence IEA]; The regulated exocytosis of secretory granules containing preformed mediators such as perforin and granzymes by a natural killer cell [goid 43320] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9066979] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a class V myosin; myosin V is a dimeric molecule involved in intracellular transport [goid 31489] [evidence IEA]	RAB27; HsT18676; GS2; MGC117246; RAM	RAB27; HsT18676; GS2; MGC117246; RAM
Homo sapiens	RefSeq	XM_497534.1	ILMN_1242	LOC401876	XM_497534.1	XM_497534.1		401876	51474391	XM_497534.1	LOC401876	XP_497534.1	ILMN_1667785	0005890132	S	609	TATAGGAGAAGCCCAGTCCTCCGCGATAACCATCCAGGCCCAGAAGACGC	17	+	22638664-22638691:22645052-22645073		PREDICTED: Homo sapiens similar to 40S ribosomal protein S16 (LOC401876), mRNA.					
Homo sapiens	RefSeq	XM_936332.1	ILMN_33917	LOC642178	XM_936332.1	XM_936332.1		642178	89026486	XM_936332.1	LOC642178	XP_941425.1	ILMN_1681411	0000070398	S	42	GGGAGCAGTTCCCATAGACACTGAAGTTACCCAGACACCAAAACACCTGG					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region 86T1 precursor (LOC642178), mRNA.					
Homo sapiens	RefSeq	NM_016286.2	ILMN_17437	DCXR	NM_016286.2	NM_016286.2		51181	41350203	NM_016286.2	DCXR	NP_057370.1	ILMN_1681437	0006660132	S	760	ACACACCTCAAGCCCCATGCCGTGCTCATCCTACCCCCAATCCCTCCAAT	17	-	79993776-79993825	17q25.3g	Homo sapiens dicarbonyl/L-xylulose reductase (DCXR), mRNA.	Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving xylulose, the ketopentose threo-2-pentulose [goid 5997] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The chemical reactions and pathways involving nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; metabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6739] [evidence IEA]; The chemical reactions and pathways involving D-xylose, a naturally occurring plant polysaccharide [goid 42732] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16614] [evidence IEA]; Catalysis of the reaction: xylitol + NADP+ = L-xylulose + NADPH [goid 50038] [evidence IEA]	P34H; HCRII; HCR2; KIDCR; DCR	P34H; HCRII; HCR2; KIDCR; DCR
Homo sapiens	RefSeq	NM_012482.3	ILMN_18970	ZNF281	NM_012482.3	NM_012482.3		23528	40255235	NM_012482.3	ZNF281	NP_036614.1	ILMN_1683127	0001240064	S	3327	AGTAAGGGATCGAAGACATTTCAAATTGCTATCTCCATCTGGGCTGATCC	1	-	200375564-200375613	1q32.1b	Homo sapiens zinc finger protein 281 (ZNF281), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 10448078] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10448078] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 10448078] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ12859; ZNP-99; ZBP-99; FLJ14378	FLJ12859; ZNP-99; ZBP-99; FLJ14378
Homo sapiens	RefSeq	NM_014564.2	ILMN_6619	LHX3	NM_014564.2	NM_014564.2		8022	30089942	NM_014564.2	LHX3	NP_055379.1	ILMN_1665011	0006270754	I	1902	CCTTCCCCGGGAGAAGCTTTCCCCAATCCCCAGGTCTCTAGATCATTCTG	9	-	139088547-139088596	9q34.3d	Homo sapiens LIM homeobox 3 (LHX3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10598593] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10598593] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10903894] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10598593] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	M2-LHX3; DKFZp762A2013	M2-LHX3; DKFZp762A2013
Homo sapiens	RefSeq	NM_024670.3	ILMN_29467	SUV39H2	NM_024670.3	NM_024670.3		79723	34147611	NM_024670.3	SUV39H2	NP_078946.1	ILMN_1789351	0006330441	S	2750	TTGGACCCTCAGATTCTGTTAACCAAAATTGCAGAATGGGGGGCCAGGCC	10	+	14945977-14946026	10p13c	Homo sapiens suppressor of variegation 3-9 homolog 2 (Drosophila) (SUV39H2), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 10949293] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence ISS]; The formation or destruction of chromatin structures [goid 6333] [pmid 10949293] [evidence IMP]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 10949293] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence ISS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone [goid 51567] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a protein [goid 8276] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the addition of a methyl group onto lysine at position 9 of the histone H3 protein [goid 46974] [pmid 10949293] [evidence IDA]; Catalysis of the addition of a methyl group onto lysine at position 9 of the histone H3 protein [goid 46974] [evidence ISS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	FLJ23414	FLJ23414
Homo sapiens	RefSeq	XR_017529.2	ILMN_183827	LOC644315	XR_017529.2	XR_017529.2		644315	169210977	XR_017529.2	LOC644315		ILMN_3209676	0003710603	A	88	AGATCGTGAAGCCCAATGGCGAGAAGCCGGACGAGTTCGAGTCCGGCCAT	17	-	42154648-42154697	17q21.32a	PREDICTED: Homo sapiens misc_RNA (LOC644315), miscRNA.					
Homo sapiens	RefSeq	NM_173473.2	ILMN_164640	C10ORF104	NM_173473.2	NM_173473.2		119504	50234894	NM_173473.2	C10orf104	NP_775744.1	ILMN_1738955	0007210300	S	3019	GCAATCACTACCTTTCTCGTTTCATTTGTGTAACCATGCAGCATAGGCAC	10	+	73665448-73665497	10q22.1e-q22.1f	Homo sapiens chromosome 10 open reading frame 104 (C10orf104), mRNA.				FLJ33728; bA570G20.3	FLJ33728; bA570G20.3
Homo sapiens	RefSeq	NM_000829.1	ILMN_24863	GRIA4	NM_000829.2	NM_000829.2		2893	116284387	NM_000829.2	GRIA4	NP_000820.2	ILMN_1692094	0004920113	S	2706	CGTCTTGACGCCTGACTGCCCAAAGGCTGTACACACTGGAACTGCAATCA	11	+	105355583-105355632	11q22.3b	Homo sapiens glutamate receptor, ionotrophic, AMPA 4 (GRIA4), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8589990] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 8589990] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with glutamate to initiate a change in cell activity through the regulation of ion channels [goid 4970] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]	GLUR4C; GLUR4; GLURD	GLUR4C; GLUR4; GLURD
Homo sapiens	RefSeq	XM_929291.1	ILMN_31011	FLJ46361	XM_929291.1	XM_929291.1		375940	89031632	XM_929291.1	FLJ46361	XP_934384.1	ILMN_1717717	0003420201	A	6674	CCAAATGGTGGGGCCACTGGAGATCCACAAAGTCACTGCTCAGAGGAGGA	10	+	124575894-124575943	10q26.13b	PREDICTED: Homo sapiens FLJ46361 protein (FLJ46361), mRNA.					
Homo sapiens	RefSeq	XM_929291.1	ILMN_31011	FLJ46361	XM_929291.1	XM_929291.1		375940	89031632	XM_929291.1	FLJ46361	XP_934384.1	ILMN_1719635	0000940437	I	3654	TCAATGGTCCCAGGATTGCCTCGCTCTCCATGGGGAAGTTCTGTGCCCCT	10	+	124535511-124535560	10q26.13b	PREDICTED: Homo sapiens FLJ46361 protein (FLJ46361), mRNA.					
Homo sapiens	RefSeq	XM_001718037.1	ILMN_335146	LOC100132941	XM_001718037.1	XM_001718037.1		100132941	169209923	XM_001718037.1	LOC100132941	XP_001718089.1	ILMN_3235817	0005260050	S	501	CTCAGGCAGGGCTAAGGTGTCTGGGGAATGCAGAGTTGTGTTCACGAAGA	16	+	32916380-32916429	16p11.2b	PREDICTED: Homo sapiens hypothetical protein LOC100132941 (LOC100132941), mRNA.					
Homo sapiens	RefSeq	XM_929541.1	ILMN_43598	LOC644480	XM_929541.1	XM_929541.1		644480	88997742	XM_929541.1	LOC644480	XP_934634.1	ILMN_1670053	0001070364	S	61	CCAAATTTCCCCTTTGTATAAGAATACCAGTTGTATTTGATTAGGGCCCA	6	+	143699288-143699337		PREDICTED: Homo sapiens hypothetical protein LOC644480 (LOC644480), mRNA.					
Homo sapiens	RefSeq	NM_198154.1	ILMN_19546	TMEM95	NM_198154.1	NM_198154.1		339168	37700255	NM_198154.1	TMEM95	NP_937797.1	ILMN_1766422	0001170750	S	753	ATCCCCAAAAACCCAGATCCCCCACAATCCCAGTGTCAGATGGCCTCCCG	17	+	7200846-7200895	17p13.1d	Homo sapiens transmembrane protein 95 (TMEM95), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			UNQ9390; MGC129793	UNQ9390; MGC129793
Homo sapiens	RefSeq	NM_016436.3	ILMN_168097	PHF20	NM_016436.4	NM_016436.4		51230	110735447	NM_016436.4	PHF20	NP_057520.2	ILMN_1813657	0004210241	S	5176	CCATGTTGAGGGGCTCCATTCCCAATTCCTGGGTCAAGGTGAATTAACCC	20	+	34000989-34001038	20q11.22b-q11.23a	Homo sapiens PHD finger protein 20 (PHF20), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C20orf104; GLEA2; FLJ33479; NZF; TZP; HCA58	C20orf104; GLEA2; FLJ33479; NZF; TZP; HCA58
Homo sapiens	RefSeq	NM_020714.2	ILMN_370262	ZNF490	NM_020714.2	NM_020714.2		57474	209976987	NM_020714.2	ZNF490	NP_065765.1	ILMN_3307719	0001580019	S	5968	CAGGCCCGGCTGGAATGCTTGCATTTTCTTGCCTGATTTCCCTGGGAGCA	19	-	12687000-12687049	19p13.2a	Homo sapiens zinc finger protein 490 (ZNF490), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_012240.1	ILMN_1274	SIRT4	NM_012240.1	NM_012240.1		23409	6912661	NM_012240.1	SIRT4	NP_036372.1	ILMN_1657868	0004570131	S	924	TCTCGTTGTGGAGAGTTGCTGCCTTTGATAGACCCATGCTGACCACAGCC	12	+	119235181-119235222:119235223-119235230	12q24.31a	Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 4 (S. cerevisiae) (SIRT4), mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [pmid 10381378] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 10381378] [evidence TAS]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [pmid 16959573] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	MGC130047; MGC130046; MGC57437; SIR2L4; sirtuin 4	MGC130047; MGC130046; MGC57437; SIR2L4; sirtuin 4
Homo sapiens	RefSeq	NM_001771.1	ILMN_11761	CD22	NM_001771.1	NM_001771.1		933	4502650	NM_001771.1	CD22	NP_001762.1	ILMN_1792075	0001010754	S	2973	CTCTGGCCCTCTACCCCTGATCTGACATCCCCACTCACGAATATTATGCC	19	+	40529826-40529875	19q13.12a	Homo sapiens CD22 molecule (CD22), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8496602] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8496602] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8647200] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8627166] [evidence IPI]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	SIGLEC-2; MGC130020; SIGLEC2	SIGLEC-2; MGC130020; SIGLEC2
Homo sapiens	Unigene	Hs.552025	ILMN_110801	HS.552025	Hs.552025		Hs.552025		19030000	BM716742			ILMN_1868851	0006220110	S	325	GCCCACTGGCAGAGACCATAAGTCCTGGATTGCTTGGGACACTTCCACTT	20	-	4706801-4706850		UI-E-EJ0-ahk-f-18-0-UI.r2 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahk-f-18-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_032193.3	ILMN_29121	RNASEH2C	NM_032193.3	NM_032193.3		84153	113204623	NM_032193.3	RNASEH2C	NP_115569.2	ILMN_3251565	0005690523	S	2318	CCTGCTGTAAGACTTGAGTGGCCTGACTGGGTGGTTGTGAGGATGCAAGG	11	-	65485561-65485610	11q13.1d	Homo sapiens ribonuclease H2, subunit C (RNASEH2C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AYP1; AGS3; FLJ20974; MGC22934	FLJ20974; MGC22934
Homo sapiens	RefSeq	NM_032193.2	ILMN_29121	RNASEH2C	NM_032193.3	NM_032193.3		84153	113204623	NM_032193.3	RNASEH2C	NP_115569.2	ILMN_1765518	0003060736	S	803	TAAGCCAGCATGGGCCCTTTCCCCCTCCCCACCAAGAACTTTGCATGGCT	11	-	65487076-65487125	11q13.1d	Homo sapiens ribonuclease H2, subunit C (RNASEH2C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			AYP1; AGS3; FLJ20974; MGC22934	FLJ20974; MGC22934
Homo sapiens	Unigene	Hs.545536	ILMN_108726	HS.545536	Hs.545536		Hs.545536		7152183	AW514101			ILMN_1827261	0001470725	S	259	GCTGATAAGAAAATAGATGAGTGGAGGTGAAGTGGTTTGTCTGGGGTCAC	8	-	8827863-8827912		xt81d06.x1 NCI_CGAP_Ut1 Homo sapiens cDNA clone IMAGE:2792843 3, mRNA sequence					
Homo sapiens	RefSeq	XM_929571.1	ILMN_38653	LOC647726	XM_936788.1	XM_936788.1		647726	89047358	XM_936788.1	LOC647726	XP_941881.1	ILMN_1723641	0006220246	S	177	CAGGGCCATCTTGTTGAAGAGCCACAGAGTTCACACTCAAGAGATGCCAT					PREDICTED: Homo sapiens similar to Zinc finger protein 551 (Zinc finger protein KOX23) (LOC647726), mRNA.					
Homo sapiens	RefSeq	XM_001715341.1	ILMN_337283	LOC100131257	XM_001715341.1	XM_001715341.1		100131257	169171322	XM_001715341.1	LOC100131257	XP_001715393.1	ILMN_3278357	0002140215	M	1	ATGAGCAGGTCTGTAGATACTAGAGGAGGGCTCAATGAAGAAGGTGAGGT				7p22.1a	PREDICTED: Homo sapiens similar to hCG19534 (LOC100131257), mRNA.					
Homo sapiens	RefSeq	NM_152990.2	ILMN_21991	PXT1	NM_152990.2	NM_152990.2		222659	24475838	NM_152990.2	PXT1	NP_694535.1	ILMN_1812981	0004900682	S	998	GCCTGCTTAAAATCGGGAGTGCTTAGTCCTTGGCCAACAGTCCTGCCTTC	6	-	36466663-36466712	6p21.31a	Homo sapiens peroxisomal, testis specific 1 (PXT1), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]			STEPP; MGC129569	STEPP; MGC129569
Homo sapiens	RefSeq	XM_935059.1	ILMN_42515	LOC645520	XM_935059.1	XM_935059.1		645520	88942122	XM_935059.1	LOC645520	XP_940152.1	ILMN_1723732	0002060474	I	1114	TTAAGCCTTTATTTGTTTATAGTTGGTTACAGCAACTGCCTTCTTTTAAT	1	-	24434-24483		PREDICTED: Homo sapiens similar to signal-transducing adaptor protein-2 isoform 1, transcript variant 2 (LOC645520), mRNA.					
Homo sapiens	RefSeq	NM_006929.4	ILMN_646	SKIV2L	NM_006929.4	NM_006929.4		6499	67782310	NM_006929.4	SKIV2L	NP_008860.4	ILMN_1666512	0005560541	S	4039	TAGGAGAGCCTGTGCTGGGTGCCAAGATGGAGACAGCGGCTACCTTGCTA	6	+	31937401-31937450	6p21.32b	Homo sapiens superkiller viralicidic activity 2-like (S. cerevisiae) (SKIV2L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 7610041] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]	SKIV2; DDX13; SKI2W; SKI2; 170A; HLP	SKIV2; DDX13; SKI2W; SKI2; 170A; HLP
Homo sapiens	RefSeq	NM_002896.1	ILMN_11057	RBM4	NM_002896.1	NM_002896.1		5936	4506444	NM_002896.1	RBM4	NP_002887.1	ILMN_1757439	0001240541	I	473	CGAATGCACGTGCAGTTGTCCACCAGCCGGCTTAGGACTGCGCCCGGGAT	11	+	66167523-66167572	11q13.1e	Homo sapiens RNA binding motif protein 4 (RBM4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors on mast cells or basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines [goid 16068] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9169144] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZCCHC21; ZCRB3A; RBM4A; LARK; DKFZp547K0918; MGC75138	ZCCHC21; RBM4A; LARK; MGC75138; ZCRB3A; DKFZp547K0918
Homo sapiens	RefSeq	XR_016598.2	ILMN_163534	LOC339843	XR_016598.2	XR_016598.2		339843	169165135	XR_016598.2	LOC339843		ILMN_3276016	0005670168	M	2578	TGCTACTATTGCAGTTCGTCACTGGAACCTGCCGTTTATCTCTAGGAGGA	3	+	99861866-99861915	3q12.1a	PREDICTED: Homo sapiens misc_RNA (LOC339843), miscRNA.					
Homo sapiens	Unigene	Hs.557218	ILMN_112752	HS.557218	Hs.557218		Hs.557218		1108803	H95661			ILMN_1892129	0005340528	S	291	GTCATACACTGAAATCCATACACAGGTTTCCGCCCCCGAGCTTCCTGCAG	16	-	24744692-24744693:24744695-24744709:24744711-24744720:24744722-24744744		yv17e05.s1 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGE:243008 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001002002.1	ILMN_15872	GMPR2	NM_001002002.1	NM_001002002.1		51292	50541947	NM_001002002.1	GMPR2	NP_001002002.1	ILMN_1677919	0002490600	A	1321	CTGCACACACAAAATGCCCAAGGCACTCACTGGGGAGGAAGCAAGGAAGC	14	+	23777982-23778031	14q12a	Homo sapiens guanosine monophosphate reductase 2 (GMPR2), transcript variant 4, mRNA.		The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]	Catalysis of the reaction: inosine 5'-phosphate + NH3 + NADP+ = guanosine 5'-phosphate + NADPH + H+ [goid 3920] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NH3 + NADP+ = guanosine 5'-phosphate + NADPH + H+ [goid 3920] [evidence IEA]	MGC15084; MGC830	MGC15084; MGC830
Homo sapiens	RefSeq	NR_031744.1	ILMN_388665	MIR2052	NR_031744.1	NR_031744.1		100302260	269847688	NR_031744.1	MIR2052		ILMN_3309379	0002120187	S	2	GTTTTGATAACAGTAATGTCCCTTTAGTTCAAAGTTACCAGCTATCAAAA					Homo sapiens microRNA 2052 (MIR2052), microRNA.					
Homo sapiens	RefSeq	NM_022055.1	ILMN_15795	KCNK12	NM_022055.1	NM_022055.1		56660	11545760	NM_022055.1	KCNK12	NP_071338.1	ILMN_1711988	0001940193	S	1337	GCCGCCGGGCGTGGTTTGCTTCTCTCAGTCACTGCTGGCGCTTTCTTAAT	2	-	47747952-47748001	2p16.3d	Homo sapiens potassium channel, subfamily K, member 12 (KCNK12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	THIK2; THIK-2	THIK-2; THIK2
Homo sapiens	RefSeq	NM_022336.1	ILMN_29351	EDAR	NM_022336.2	NM_022336.2		10913	142372361	NM_022336.2	EDAR	NP_071731.1	ILMN_1767322	0003710020	S	3843	CAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGC	2	-	108877680-108877729	2q13a	Homo sapiens ectodysplasin A receptor (EDAR), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10431241] [evidence NAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 12270937] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 10431241] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11035039] [evidence IPI]	DL; ED1R; ED5; ED3; EDA3; EDA-A1R; EDA1R	DL; ED1R; ED3; EDA3; ED5; EDA-A1R; EDA1R
Homo sapiens	RefSeq	XM_001725372.1	ILMN_350975	LOC643159	XM_001725372.1	XM_001725372.1		643159	169211486	XM_001725372.1	LOC643159	XP_001725424.1	ILMN_3294175	0006220500	M	1292	GGGTAGGTCAGGAGTGTCAACGTGCTTGTACATAGAGTGTCTGCTGTAGC				17q25.1d	PREDICTED: Homo sapiens similar to activating transcription factor 4 (LOC643159), mRNA.					
Homo sapiens	RefSeq	NR_030374.1	ILMN_388179	MIR644	NR_030374.1	NR_030374.1		693229	262206209	NR_030374.1	MIR644		ILMN_3309950	0006510497	S	42	GCTCTGTAGTTTTCTTATAGTGTGGCTTTCTTAGAGCAAAGATGGTTCCC					Homo sapiens microRNA 644 (MIR644), microRNA.					
Homo sapiens	RefSeq	XM_941946.1	ILMN_163618	LOC731777	XR_015950.1	XR_015950.1		731777	113415265	XR_015950.1	LOC731777		ILMN_1703102	0005390070	S	3	CTGCGTGGTCACGCTGAGCCAGCGCCTGGGCCTGGAACCGGGCTGCAGCC					PREDICTED: Homo sapiens similar to heat shock 70kD protein binding protein (LOC731777), mRNA.					
Homo sapiens	RefSeq	NM_002620.1	ILMN_169781	PF4V1	NM_002620.2	NM_002620.2		5197	89242144	NM_002620.2	PF4V1	NP_002611.1	ILMN_1745522	0001410278	S	101	GCCACCCGCCAGGAGATGCTGTTCTTGGCGTTGCTGCTCCTGCCAGTTGT	4	+	74719113-74719162	4q13.3d	Homo sapiens platelet factor 4 variant 1 (PF4V1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	CXCL4V1; SCYB4V1; PF4A; PF4-ALT	CXCL4V1; SCYB4V1; PF4A; PF4-ALT
Homo sapiens	RefSeq	XM_944071.1	ILMN_39728	LOC650154	XM_944071.1	XM_944071.1		650154	88987219	XM_944071.1	LOC650154	XP_949164.1	ILMN_1773323	0005820288	S	162	GGACCTTCTGGCGGGAGCCGCAGCTTTTCAGGGCAACTGTCCTTGTCCCT					PREDICTED: Homo sapiens hypothetical LOC650154 (LOC650154), mRNA.					
Homo sapiens	RefSeq	XM_940853.1	ILMN_40157	LOC651648	XM_940853.1	XM_940853.1		651648	89062075	XM_940853.1	LOC651648	XP_945946.1	ILMN_1772399	0004760037	S	670	ACCCTCGCTGTAGCACGACATGGCCCTCAGCCAAGTTCACTAGCATCCTG					PREDICTED: Homo sapiens similar to Arachidonate 5-lipoxygenase (5-lipoxygenase) (5-LO) (LOC651648), mRNA.					
Homo sapiens	RefSeq	XM_001719876.1	ILMN_351115	LOC644092	XM_001719876.1	XM_001719876.1		644092	169202884	XM_001719876.1	LOC644092	XP_001719928.1	ILMN_3294376	0003440750	M	513	GGTCGAAAATAAGTGCCTAAACAAGGCCAGGAGTGGTGGCTCAGGCTTGT				11q12.3a	PREDICTED: Homo sapiens similar to RCC1-like protein (LOC644092), mRNA.					
Homo sapiens	RefSeq	NM_001490.3	ILMN_164463	GCNT1	NM_001490.3	NM_001490.3		2650	34485725	NM_001490.3	GCNT1	NP_001481.2	ILMN_2225135	0003180091	S	5451	CTTTTGAATGAGGGTGCGACAGAATGCAGTTAGAATCAGTTCATATCACC	9	+	78312085-78312134	9q21.13c	Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1329093] [evidence TAS]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 1329093] [evidence TAS]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R [goid 3829] [pmid 1329093] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	NACGT2; C2GNT; C2GNT1; NAGCT2; MGC126335; G6NT; C2GNT-L; MGC126336	NACGT2; C2GNT; C2GNT1; MGC126335; G6NT; C2GNT-L; MGC126336; NAGCT2
Homo sapiens	RefSeq	NM_005007.2	ILMN_8342	NFKBIL1	NM_005007.2	NM_005007.2		4795	26787990	NM_005007.2	NFKBIL1	NP_004998.2	ILMN_2046344	0007000215	S	883	AGCCAGGAGGGCGCAGGAGGCTCTAGGGGACCGAGAACCCAAGCCAACCA	6	+	31634004-31634053	6p21.33a	Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 (NFKBIL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [pmid 8081366] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	NFKBIL; LST1; IKBL	NFKBIL; LST1; IKBL
Homo sapiens	RefSeq	NM_020403.3	ILMN_28312	PCDH9	NM_203487.1	NM_203487.1		5101	45243533	NM_203487.1	PCDH9	NP_982354.1	ILMN_1752294	0006660707	A	6058	GGGTAGGGGTGCATTGCTTATTGAAGTACATTTTTGTCGGTTTGTGAGGG	13	-	65775081-65775130	13q21.32b	Homo sapiens protocadherin 9 (PCDH9), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_203487.1	ILMN_28312	PCDH9	NM_203487.1	NM_203487.1		5101	45243533	NM_203487.1	PCDH9	NP_982354.1	ILMN_1668147	0000160427	I	3754	CCTGTCACTCCTCAGAAATGTCCCAGCTCCACGGGTTTCCACATTCAGGA	13	-	66375658-66375707	13q21.32b	Homo sapiens protocadherin 9 (PCDH9), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_001018139.1	ILMN_17934	NME2	NM_001018139.1	NM_001018139.1		4831	66392226	NM_001018139.1	NME2	NP_001018149.1	ILMN_2414007	0004590138	A	584	GAGGCAACAGGATTGATCATTCTTTTATAGAGCATATTTGCCAATAAAGC	17	+	46604041-46604090	17q21.33b	Homo sapiens non-metastatic cells 2, protein (NM23B) expressed in (NME2), transcript variant 4, mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 11919189] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 11919189] [evidence IDA]	The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8392752] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 11919189] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 93324921] [evidence TAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a nucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with triphosphate on its glycose moiety [goid 9142] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 16862176] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of keratinocyte differentiation [goid 45618] [pmid 16862176] [evidence IMP]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [pmid 16862176] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 16862176] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8392752] [evidence TAS]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [pmid 91224972] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC111212; NM23-H2; NM23B; puf; NDPKB; NDPK-B	MGC111212; NM23-H2; NM23B; puf; NDPKB; NDPK-B
Homo sapiens	RefSeq	NM_002094.1	ILMN_5039	GSPT1	NM_002094.2	NM_002094.2		2935	142364153	NM_002094.2	GSPT1	NP_002085.1	ILMN_1750130	0000830259	S	2491	AGTATTTTTCCCCCAGGCCAGATCATTCGTGAGTGTGCGAGTGTGTGTGC	16	-	11874081-11874130	16p13.13b	Homo sapiens G1 to S phase transition 1 (GSPT1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 15326224] [evidence NAS]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 2511002] [evidence TAS]; The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 15326224] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Involved in catalyzing the release of a nascent polypeptide chain from a ribosome [goid 3747] [pmid 15326224] [evidence IMP]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 15326224] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9712840] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9620853] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12489690] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	eRF3a; ETF3A; 551G9.2; GST1	eRF3a; ETF3A; 551G9.2; GST1
Homo sapiens	RefSeq	Hs.551651	ILMN_167098	LOC732316	XM_001132737.1	XM_001132737.1		732316	113422821	XM_001132737.1	LOC732316	XP_001132737.1	ILMN_1876539	0002030121	S	195	GTTCACCTCTATTCATCTGAGAGCTGTTGACCGGGCCCTTGCTGGGTGGG					PREDICTED: Homo sapiens hypothetical protein LOC732316 (LOC732316), mRNA.					
Homo sapiens	RefSeq	NR_003236.1	ILMN_162168	SNORD113-8	NR_003236.1	NR_003236.1		767568	115432114	NR_003236.1	SNORD113-8		ILMN_3308275	0001450497	S	22	GGTGTCTGAATCAAAAATTTTGATTAAAGCCATCTGTAACTCTGAGGTCC	14	+	100479562-100479611	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 113-8 (SNORD113-8), small nucleolar RNA.				14q(I-8)	14q(I-8)
Homo sapiens	Unigene	Hs.579070	ILMN_131251	HS.579070	Hs.579070		Hs.579070		80856651	DA481142			ILMN_1882708	0006060112	S	153	CTGAGAGGGTGGCCTGGATGGTGGAGCTGCAAGAGCCTGATAAGAGCCTT	17	-	58863101-58863150		DA481142 ERLTF1 Homo sapiens cDNA clone ERLTF1000182 5, mRNA sequence					
Homo sapiens	RefSeq	NM_015052.2	ILMN_6631	HECW1	NM_015052.3	NM_015052.3		23072	94536810	NM_015052.3	HECW1	NP_055867.3	ILMN_1790645	0004210010	S	6638	CCTTCACCCATAGTAATCCTCCTGGGGCAGAAACATAACACCCCAAAGGC	7	+	43485100-43485149	7p14.1a-p13e	Homo sapiens HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 (HECW1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	NEDL1; KIAA0322	NEDL1; KIAA0322
Homo sapiens	RefSeq	NM_006034.2	ILMN_17812	TP53I11	NM_006034.2	NM_006034.2		9537	33695116	NM_006034.2	TP53I11	NP_006025.2	ILMN_1715669	0000240608	S	2562	CTCTTGCTACCTAAGCCTGTGCCTCTCCCTAAAGAGCTGCCTCCCTGCTG	11	-	44911207-44911256	11p11.2d	Homo sapiens tumor protein p53 inducible protein 11 (TP53I11), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9305847] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9305847] [evidence TAS]		PIG11	PIG11
Homo sapiens	RefSeq	NM_182578.2	ILMN_356677	THEM5	NM_182578.2	NM_182578.2		284486	170784818	NM_182578.2	THEM5	NP_872384.1	ILMN_3307695	0004250639	S	714	CCCCGTGGACTCTCTGGTTGTAATGGACGTAGAAGTGGACAAGATTGAGG	1	-	151820282-151820331	1q21.3a	Homo sapiens thioesterase superfamily member 5 (THEM5), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	Unigene	Hs.544557	ILMN_107948	HS.544557	Hs.544557		Hs.544557		6575402	AW241648			ILMN_1886127	0005050564	S	89	CCTGTTGGCTTGCAGACCACTGCCTTCTCATTGCATCCTCACATGGCCTC	6	+	70440718-70440767		xm77f11.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2690253 3, mRNA sequence					
Homo sapiens	RefSeq	NM_024016.2	ILMN_16075	HOXB8	NM_024016.3	NM_024016.3		3218	85543349	NM_024016.3	HOXB8	NP_076921.1	ILMN_1798496	0000870524	S	1742	GTTGTTCCTCTATACTTTGTTCTGTTGTCTGCGCCTGAAAAGGGCGGAAG	17	-	46689739-46689788	17q21.32c	Homo sapiens homeobox B8 (HOXB8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-2.4; HOX2; HOX2D	Hox-2.4; HOX2; HOX2D
Homo sapiens	Unigene	Hs.583853	ILMN_136034	HS.583853	Hs.583853		Hs.583853		83147823	DB299164			ILMN_1851326	0006040300	S	187	CTGCCGCCGCACGTCCGAAACCACTCACTATACAATGTCAGGACCATCTC	8	-	12029852-12029901		DB299164 BRACE3 Homo sapiens cDNA clone BRACE3013730 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038208.1	ILMN_343616	LOC652627	XR_038208.1	XR_038208.1		652627	169218179	XR_038208.1	LOC652627		ILMN_3242582	0002970369	S	1033	AGACCTGGGTGGCCACTATCTGACCCCCAAAGGTGGGGAGGGGCAGTCCA					PREDICTED: Homo sapiens misc_RNA (LOC652627), partial miscRNA.					
Homo sapiens	RefSeq	XM_001716890.1	ILMN_348384	LOC100129146	XM_001716890.1	XM_001716890.1		100129146	169171836	XM_001716890.1	LOC100129146	XP_001716942.1	ILMN_3192046	0006400601	A	163	GTTCACCACAAACATGATCTTGGACTCTTGCTCGTAGTTGCTGCTGTCGA				7q21.12a	PREDICTED: Homo sapiens hypothetical protein LOC100129146 (LOC100129146), mRNA.					
Homo sapiens	RefSeq	NM_001080535.1	ILMN_162693	LINCR	NM_001080535.1	NM_001080535.1		93082	122937507	NM_001080535.1	LINCR	NP_001074004.1	ILMN_2235851	0000580678	I	1150	GAGGGAGTTCAGGTATCTGTTGTGACTGGTGAAGCCCTGTACCTCCTGGG	2	-	96527368-96527417	2q11.2a	Homo sapiens likely ortholog of mouse lung-inducible Neutralized-related C3HC4 RING domain protein (LINCR), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_138569.1	ILMN_25458	C6ORF142	NM_138569.2	NM_138569.2		90523	154426277	NM_138569.2	C6orf142	NP_612636.2	ILMN_1769789	0003450544	S	1401	ACCCTCCTCAGTCACAACGCATGCAACAAGCTGAGTCATCCAATGGTGGC	6	+	54067030-54067031:54094204-54094251	6p12.1c	Homo sapiens chromosome 6 open reading frame 142 (C6orf142), mRNA.				MGC18257	MGC18257
Homo sapiens	RefSeq	XM_941523.1	ILMN_45307	LOC652173	XM_941523.1	XM_941523.1		652173	89067581	XM_941523.1	LOC652173	XP_946616.1	ILMN_1652639	0006480280	S	47	ACAGGTTGGTTTCGGTGACCTTGGTTTTACCCGTTGTCCCCCTTCTCCCC					PREDICTED: Homo sapiens similar to phosphodiesterase 4D interacting protein isoform 1 (LOC652173), mRNA.					
Homo sapiens	RefSeq	NM_152348.1	ILMN_25557	WDR81	NM_152348.1	NM_152348.1		124997	22748754	NM_152348.1	WDR81	NP_689561.1	ILMN_1805863	0005130594	S	3362	AAGGCTGGCCGTGGTCCAGGAGTTAAGGGCTTGGGTCTGGGGTTTAAGTG	17	+	1588197-1588246	17p13.3d	Homo sapiens WD repeat domain 81 (WDR81), mRNA.				FLJ33817	FLJ33817
Homo sapiens	RefSeq	NM_030906.2	ILMN_6990	STK33	NM_030906.2	NM_030906.2		65975	44890053	NM_030906.2	STK33	NP_112168.1	ILMN_1778213	0000630088	S	2267	GACAGCCACCAGTAGGCTTGGCAGTGGGCTGCAGTGGAAATCAACTCAAG	11	-	8452904-8452953	11p15.4b	Homo sapiens serine/threonine kinase 33 (STK33), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	Unigene	Hs.520420	ILMN_99774	HS.520420	Hs.520420		Hs.520420		10032957	BE672416			ILMN_1913782	0007560441	S	406	GACAGAAACGTCAGCCAAGAATCTGTCTGGAAACCCCTCTTCATCTGGGC	6	+	138306314-138306346:138308499-138308515		7a60e03.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:3223132 3, mRNA sequence					
Homo sapiens	RefSeq	NR_031711.1	ILMN_388629	MIR1322	NR_031711.1	NR_031711.1		100302166	269847544	NR_031711.1	MIR1322		ILMN_3308038	0001710224	S	19	CTACTTATTACATAGTTTACATAAGAAGCGTGATGATGCTGCTGATGCTG					Homo sapiens microRNA 1322 (MIR1322), microRNA.					
Homo sapiens	RefSeq	XM_937580.1	ILMN_37029	LOC648527	XM_937580.1	XM_937580.1		648527	89030197	XM_937580.1	LOC648527	XP_942673.1	ILMN_1675923	0006580343	S	405	CTTATGTTTTTACAAGATGGCAATAAATGCTGTGGGATTGTTTGTATTAA					PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein E (LOC648527), mRNA.					
Homo sapiens	RefSeq	XM_001724202.1	ILMN_341663	LOC732434	XM_001724202.1	XM_001724202.1		732434	169218248	XM_001724202.1	LOC732434	XP_001724254.1	ILMN_3240952	0002340735	S	1	TTCCAACTCTACCGTTCGGGATTGTTCATGACATTTCATGTCGCTGTAAT					PREDICTED: Homo sapiens similar to hCG2041198 (LOC732434), mRNA.					
Homo sapiens	RefSeq	NM_001083538.1	ILMN_308339	POTEE	NM_001083538.1	NM_001083538.1		445582	134133225	NM_001083538.1	POTEE	NP_001077007.1	ILMN_3242016	0003190010	S	2158	TGATGATACCGCCGTGCTCGTCATTGACAACGGCTCTGGCATGTGCAAGG	2	+	131737604-131737653	2q21.1d	Homo sapiens POTE ankyrin domain family, member E (POTEE), mRNA.				POTE-2; POTE2; A26C1	POTE-2; POTE2; A26C1
Homo sapiens	RefSeq	NM_002701.3	ILMN_170277	POU5F1	NM_002701.4	NM_002701.4		5460	116235483	NM_002701.4	POU5F1	NP_002692.2	ILMN_1705546	0000770615	I	403	GTCACCCCTGGTGCCGTGAAGCTGGAGAAGGAGAAGCTGGAGCAAAACCC	6	-	31245978-31246027	6p21.33a	Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16153702] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18281244] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 16153702] [evidence IDA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9814708] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 16153702] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11891324] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	OTF4; OCT3; OCT4; MGC22487; OTF3	OTF4; OCT3; MGC22487; Oct4; OTF3
Homo sapiens	RefSeq	NM_002478.3	ILMN_181928	MYOD1	NM_002478.4	NM_002478.4		4654	77695919	NM_002478.4	MYOD1	NP_002469.2	ILMN_1740048	0005570307	S	1558	GGTCCCAAATGTAGCAGGTGTAACCGTAACCCACCCCCAACCCGTTTCCC	11	+	17700006-17700055	11p15.1d	Homo sapiens myogenic differentiation 1 (MYOD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 3175662] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1846704] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 3175662] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 1846704] [evidence TAS]; Process by which a cell becomes capable of differentiating autonomously into a myoblast cell regardless of its environment; upon determination, the cell fate cannot be reversed. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7518] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [pmid 3175662] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 1846704] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 1846704] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	MYOD; PUM; MYF3	MYOD; PUM; MYF3
Homo sapiens	Unigene	Hs.545993	ILMN_109064	HS.545993	Hs.545993		Hs.545993		6198441	AW150545			ILMN_1896420	0001660670	S	33	GAGGGGGAATGCTGACTAACACTCAGGGGCTACCCAAAATTTGCTAGTAG	X	+	128407263-128407312		xg52h12.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:2632007 3, mRNA sequence					
Homo sapiens	RefSeq	XM_939901.1	ILMN_35921	LOC650810	XM_939901.1	XM_939901.1		650810	88981320	XM_939901.1	LOC650810	XP_944994.1	ILMN_1726363	0007510192	S	264	AAGGAGGAAGGACCCCCTGTTGTGGGCTCGCCCAGTGGTCCATCAGAAAA					PREDICTED: Homo sapiens hypothetical protein LOC650810 (LOC650810), mRNA.					
Homo sapiens	RefSeq	NM_023015.3	ILMN_10054	INTS3	NM_023015.3	NM_023015.3		65123	39995083	NM_023015.3	INTS3	NP_075391.3	ILMN_1756086	0007200719	S	4174	GGGCATCTATGACGTGGTCAGGGTGTCCATTCCTAATCATGGGGCAGATG	1	+	152012871-152012920	1q21.3d	Homo sapiens integrator complex subunit 3 (INTS3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that stably associates with the C-terminus of RNA polymerase II and mediates 3'-end processing of small nuclear RNAs generated by RNA polymerase II [goid 32039] [pmid 16239144] [evidence IDA]	Any process involved in the conversion of a primary small nuclear RNA (snRNA) transcript into a mature snRNA molecule [goid 16180] [pmid 16239144] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16239144] [evidence IPI]	FLJ44849; C1orf193; INT3; FLJ21919; C1orf60; DKFZp781I1253; DKFZp686O20115; RP11-216N14.2; DKFZp686E1950	FLJ44849; FLJ21919; C1orf60; DKFZp781I1253; DKFZp686O20115; RP11-216N14.2; C1orf193; INT3; DKFZp686E1950
Homo sapiens	RefSeq	NM_031899.2	ILMN_12232	GORASP1	NM_031899.2	NM_031899.2		64689	29826292	NM_031899.2	GORASP1	NP_114105.1	ILMN_1716821	0006380086	S	2691	GGAGCCCAGTGTCAAGTCTGCTGGAATGCAGGAAGTAGAACAGAATCGCC	3	-	39138407-39138456	3p22.2a	Homo sapiens golgi reassembly stacking protein 1, 65kDa (GORASP1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15678101] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	P65; GRASP65; GOLPH5; FLJ23443; MGC118897; MGC118894	P65; GRASP65; GOLPH5; FLJ23443; MGC118897; MGC118894
Homo sapiens	RefSeq	NM_002307.1	ILMN_30351	LGALS7	NM_002307.1	NM_002307.1		3963	4504984	NM_002307.1	LGALS7	NP_002298.1	ILMN_1661708	0006420440	S	432	ATCTTCTGAGCAGAAGCCCAGGCGGCCCGGGGCCTTGGCTGGCAAATAAA	19	-	43953446-43953495	19q13.2a	Homo sapiens lectin, galactoside-binding, soluble, 7 (galectin 7) (LGALS7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7534301] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [pmid 7534301] [evidence TAS]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 7534301] [evidence TAS]	PIG1; GAL7; TP53I1	PIG1; GAL7; TP53I1
Homo sapiens	RefSeq	NR_002197.1	ILMN_17694	LOC143543	NR_002197.1	NR_002197.1		143543	56693300	NR_002197.1	LOC143543		ILMN_2119421	0003520470	S	1542	CGTTCTGCCCATACAAACAAGCTAGCTATTAGAGGGTGGTTGGGGTATGC	11	+	82195586-82195635	11q14.1d	Homo sapiens RNA binding motif protein, X-linked pseudogene (LOC143543) on chromosome 11.					
Homo sapiens	RefSeq	NR_002197.1	ILMN_17694	LOC143543	NR_002197.1	NR_002197.1		143543	56693300	NR_002197.1	LOC143543		ILMN_1664602	0005700681	S	1745	TCCTTGGGTATCTGCAAGAACCTCCCCTTTTGCCTCCCCCAAATAAGATC	11	+	82195789-82195838	11q14.1d	Homo sapiens RNA binding motif protein, X-linked pseudogene (LOC143543) on chromosome 11.					
Homo sapiens	RefSeq	NR_003712.1	ILMN_338848	SNORA11E	NR_003712.1	NR_003712.1		100124542	156564421	NR_003712.1	SNORA11E		ILMN_3243921	0004920435	S	3	GTGTGCTCAGAGCAGGGGGCCTGAAGAATGGCTCCTCTGTTTACAACACA	X	-	51823257-51823306	Xp11.22b	Homo sapiens small nucleolar RNA, H/ACA box 11E (SNORA11E), non-coding RNA.					
Homo sapiens	RefSeq	NM_201533.1	ILMN_13876	DGKZ	NM_201533.2	NM_201533.2		8525	149999368	NM_201533.2	DGKZ	NP_963291.1	ILMN_1675221	0006660228	I	83	TGAGGCAGATGTGGCGCTACCGCTCCTGGGACGTGCCACAGATCCCATCA	11	+	46323645-46323652:46323653-46323694	11p11.2c	Homo sapiens diacylglycerol kinase, zeta 104kDa (DGKZ), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9716136] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [pmid 16286473] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [pmid 16286473] [evidence IGI]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the phosphorylation of a simple or complex lipid [goid 1727] [pmid 16286473] [evidence IDA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 16286473] [evidence IDA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 9716136] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286473] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8626588] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 16286473] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hDGKzeta; DAGK6; DAGK5; DGK-ZETA	hDGKzeta; DAGK6; DAGK5; DGK-ZETA
Homo sapiens	RefSeq	NM_007106.2	ILMN_25010	UBL3	NM_007106.2	NM_007106.2		5412	40254846	NM_007106.2	UBL3	NP_009037.1	ILMN_1810729	0006620538	S	3338	GCCTGAATGATGAGCCTATGTCCCTGCCTAACACTGGTGTCTCACTCATC	13	-	29236843-29236892	13q12.3b	Homo sapiens ubiquitin-like 3 (UBL3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		DKFZP434K151; PNSC1; HCG-1; FLJ32018	DKFZP434K151; PNSC1; HCG-1; FLJ32018
Homo sapiens	RefSeq	XM_001131606.1	ILMN_163625	LOC729040	XM_001131606.1	XM_001131606.1		729040	113417140	XM_001131606.1	LOC729040	XP_001131606.1	ILMN_3305901	0006760138	M	784	GGGACAAATCCCTGACATCGTCCTTCCACTGTGATTTGGAGATGACCTCC				5q14.3h	PREDICTED: Homo sapiens hypothetical protein LOC729040 (LOC729040), mRNA.					
Homo sapiens	RefSeq	NM_032147.1	ILMN_168722	USP44	NM_001042403.1	NM_001042403.1		84101	109134333	NM_001042403.1	USP44	NP_001035862.1	ILMN_1807212	0001570543	S	2542	GGCTCGGATGATGAACTTGTGCAATCTTCTACCAACAAAGTTCAAGTGGC	12	-	95911621-95911670	12q22d	Homo sapiens ubiquitin specific peptidase 44 (USP44), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14528; DKFZP434D0127	FLJ14528; DKFZP434D0127
Homo sapiens	RefSeq	NM_001042403.1	ILMN_168722	USP44	NM_001042403.1	NM_001042403.1		84101	109134333	NM_001042403.1	USP44	NP_001035862.1	ILMN_2364819	0007380328	A	2209	CCTCCAGAGCTCCTGTTGGGGAGCCAACATCCCAATGAAGACGCTGATAC	12	-	95911954-95912003	12q22d	Homo sapiens ubiquitin specific peptidase 44 (USP44), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14528; DKFZP434D0127	FLJ14528; DKFZP434D0127
Homo sapiens	RefSeq	NM_018314.2	ILMN_10227	UEVLD	NM_018314.3	NM_018314.3		55293	103472014	NM_018314.3	UEVLD	NP_060784.3	ILMN_1711452	0002070332	S	1311	CTGAGAAACTCCAAAGCAGTGCATCCTCAATCCACAGTCTCCAACAACAG	11	-	18556897-18556931:18557953-18557967	11p15.1c	Homo sapiens UEV and lactate/malate dehyrogenase domains (UEVLD), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]	ATTP; FLJ11068; UEV3	ATTP; FLJ11068
Homo sapiens	RefSeq	NM_080600.1	ILMN_18404	MAG	NM_080600.1	NM_080600.1		4099	18104956	NM_080600.1	MAG	NP_542167.1	ILMN_2380181	0004280373	A	1764	AAAAAGAACGTGACAGAGAGCCCCAGCTTCTCGGCAGGGGACAACCCTCC	19	+	35801545-35801546:35802821-35802868	19q13.12a	Homo sapiens myelin associated glycoprotein (MAG), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	SIGLEC4A; S-MAG; SIGLEC-4A; GMA	SIGLEC4A; S-MAG; SIGLEC-4A; GMA
Homo sapiens	RefSeq	NM_002361.2	ILMN_18404	MAG	NM_080600.1	NM_080600.1		4099	18104956	NM_080600.1	MAG	NP_542167.1	ILMN_1803773	0001440196	A	2336	TATTTATTGCTACTTCCTGCCTGGTCTCCTGCCCCCACACCTGGCCCTGG	19	+	35804618-35804667	19q13.12a	Homo sapiens myelin associated glycoprotein (MAG), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	SIGLEC4A; S-MAG; SIGLEC-4A; GMA	SIGLEC4A; S-MAG; SIGLEC-4A; GMA
Homo sapiens	Unigene	Hs.49181	ILMN_72878	HS.49181	Hs.49181		Hs.49181		4598260	AI589212			ILMN_1874108	0001030128	S	158	AGAGGCCAACAGATAACGAAGTTGTACAGATAGCCTTTGGCACTCATGGC	7	+	136562216-136562265		tn48d04.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2171623 3, mRNA sequence					
Homo sapiens	RefSeq	XR_040615.1	ILMN_351582	LOC645739	XR_040615.1	XR_040615.1		645739	169206041	XR_040615.1	LOC645739		ILMN_3294915	0006420601	M	95	AGCAGCAAAAGCTGGCCCTGCAGGACTTCTTGGAGCTCTGTGAGCTGGTA				13q12.11a	PREDICTED: Homo sapiens hCG1646718 (LOC645739), miscRNA.					
Homo sapiens	RefSeq	NM_033388.1	ILMN_16649	ATG16L2	NM_033388.1	NM_033388.1		89849	55743107	NM_033388.1	ATG16L2	NP_203746.1	ILMN_1664644	0002000307	S	1838	TGCTACTCCGGGAGCCACATGGTGAGCGTGGACCAGGGCAGGAAGGTTGT	11	+	72218021-72218070	11q13.4b	Homo sapiens ATG16 autophagy related 16-like 2 (S. cerevisiae) (ATG16L2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		FLJ00012; WDR80	FLJ00012; WDR80
Homo sapiens	RefSeq	NM_007063.2	ILMN_13299	TBC1D8	NM_007063.3	NM_007063.3		11138	148746200	NM_007063.3	TBC1D8	NP_008994.2	ILMN_1735495	0000620619	S	3854	CTGGCTAAACAACCTGACAAACTGTGGCCAGGGGAACCGACACAACCCTC				2q11.2e	Homo sapiens TBC1 domain family, member 8 (with GRAM domain) (TBC1D8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10373574] [evidence TAS]	The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 10373574] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10373574] [evidence TAS]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	AD3; VRP; HBLP1	AD3; VRP; HBLP1
Homo sapiens	Unigene	Hs.495080	ILMN_96742	HS.495080	Hs.495080		Hs.495080		32212334	CD691023			ILMN_1831489	0006960328	S	475	ACTGACAGCTGGGGGAAATTCCAGTTTGGAGCAGGGACCCAGGTTGTGGT	14	+	22058838-22058848:22086287-22086325		EST7546 human nasopharynx Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_939576.1	ILMN_32862	KIAA1957	XM_939576.1	XM_939576.1		126567	89056993	XM_939576.1	KIAA1957	XP_944669.1	ILMN_1653155	0007400220	I	16	GTAAAGCACCTGAAACTGCCTGCGGCCTGCGGCACACGGGCTCCTGTGTT				19p13.3j	PREDICTED: Homo sapiens KIAA1957 (KIAA1957), mRNA.					
Homo sapiens	RefSeq	XM_936821.1	ILMN_29686	FAT4	NM_024582.3	NM_024582.3		79633	110835703	NM_024582.3	FAT4	NP_078858.3	ILMN_1720162	0006200095	A	5070	TCAGACCGCAGCCATTCTGGACCGGGAGCAAGGAGCATGTCTTTACCTGG	4	+	126462086-126462135	4q28.1c	Homo sapiens FAT tumor suppressor homolog 4 (Drosophila) (FAT4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nbla00548; FAT-J; FATJ; CDHF14; FLJ23056	
Homo sapiens	RefSeq	NM_024582.2	ILMN_29686	FAT4	NM_024582.3	NM_024582.3		79633	110835703	NM_024582.3	FAT4	NP_078858.3	ILMN_1761551	0001190338	S	14592	AGGGCAGCAAGCAGGGACTTTCAACTGGGACAACCTTTTGAACTGGGGCC	4	+	126632190-126632239	4q28.1c	Homo sapiens FAT tumor suppressor homolog 4 (Drosophila) (FAT4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nbla00548; FAT-J; FATJ; CDHF14; FLJ23056	Nbla00548; FAT-J; CDHF14; FLJ23056; FATJ
Homo sapiens	RefSeq	NM_080826.1	ILMN_309219	ISM1	NM_080826.1	NM_080826.1		140862	153791191	NM_080826.1	ISM1	NP_543016.1	ILMN_3239288	0002760086	S	1708	CACCCGGATCCAGAGTTTCAAAGAGAGGCAAAGGGGGAAAGAGACTGAGG	20	+	13228269-13228318	20p12.1d	Homo sapiens isthmin 1 homolog (zebrafish) (ISM1), mRNA.				bA149I18.1; dJ1077I2.1	bA149I18.1; dJ1077I2.1
Homo sapiens	RefSeq	XM_939699.1	ILMN_309219	ISM1	NM_080826.1	NM_080826.1		140862	153791191	NM_080826.1	ISM1	NP_543016.1	ILMN_1772869	0005550092	A	2170	CTGCTCATGTCCTAGCAGGTTCAGAAGACTGCAGCCAAGTTCAGATGTAA	20	+	13228731-13228780	20p12.1d	Homo sapiens isthmin 1 homolog (zebrafish) (ISM1), mRNA.				bA149I18.1; dJ1077I2.1	
Homo sapiens	Unigene	Hs.169815	ILMN_80156	HS.169815	Hs.169815		Hs.169815		3148308	AA973128			ILMN_1873261	0006400612	S	360	GTGGCACAAAGATGAGTCCGTTAGAGATCCTGTCCCAGTTTAGGGGCGAT	3	-	197799917-197799966		op45f10.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1579819 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022361.3	ILMN_162273	POPDC3	NM_022361.3	NM_022361.3		64208	34335275	NM_022361.3	POPDC3	NP_071756.2	ILMN_1652244	0001470324	S	1660	CAGCCTGAGGGTGGGTTGCTACTGTCCACATAGGCATTTCCGGAATTCAC	6	-	105712618-105712667	6q21b	Homo sapiens popeye domain containing 3 (POPDC3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10882522] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC22671; bA355M14.1; POP3	MGC22671; bA355M14.1; POP3
Homo sapiens	RefSeq	XM_001716424.1	ILMN_341966	LOC731656	XM_001716424.1	XM_001716424.1		731656	169162076	XM_001716424.1	LOC731656	XP_001716476.1	ILMN_3301155	0002190500	M	567	GCCCGAGGACTTCAGCTTTTGGTTGTCCTGCTGAGAGGATGCGGCATTTG					PREDICTED: Homo sapiens hypothetical protein LOC731656 (LOC731656), mRNA.					
Homo sapiens	RefSeq	NM_004703.3	ILMN_307418	RABEP1	NM_001083585.1	NM_001083585.1		9135	134152673	NM_001083585.1	RABEP1	NP_001077054.1	ILMN_1719622	0000240110	S	4808	AGCTCAGTTGGGTTTCACGAGTGTTCCTGTGCTTATATTCAGTCTGTGCC	17	+	5228982-5229031	17p13.2b	Homo sapiens rabaptin, RAB GTPase binding effector protein 1 (RABEP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 8521472] [evidence TAS]; Organelle consisting of networks of 60nm tubules organized around the microtubule organizing centre in some cell types. They transport receptors from late endosomes back to the plasma membrane for recycling and are also involved in membrane trafficking [goid 55037] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 8521472] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 8521472] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12505986] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15143060] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	RABPT5; RAB5EP	RABPT5; RAB5EP
Homo sapiens	RefSeq	NM_012196.1	ILMN_8002	GAGE8	NM_012196.1	NM_012196.1		100101629	7705378	NM_012196.1	GAGE8	NP_036328.1	ILMN_2104486	0001170601	S	51	CTGAGATTCATCTGTGTGAAATATGAGTTGGCGAGGAAGATCGACCTATC	X	+	49084601-49084614:49085655-49085662:49085663-49085690		Homo sapiens G antigen 8 (GAGE8), mRNA.		A defense response that is mediated by cells [goid 6968] [pmid 10397259] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]		
Homo sapiens	RefSeq	XM_929513.1	ILMN_40715	LOC646580	XM_929513.1	XM_929513.1		646580	89058953	XM_929513.1	LOC646580	XP_934606.1	ILMN_1772594	0003400075	S	458	AGCCTTCCCCACTGAAGTGCCAGTTCCCGTTCCTGACACCTCCACCCAAA	22	+	30846234-30846283		PREDICTED: Homo sapiens hypothetical protein LOC646580 (LOC646580), mRNA.					
Homo sapiens	RefSeq	XM_938398.1	ILMN_45335	LOC649327	XM_938398.1	XM_938398.1		649327	88987750	XM_938398.1	LOC649327	XP_943491.1	ILMN_1721685	0002340097	S	48	TGGTGACATTAGATCCAAGCATCCCAGTACCGAGGAACTACTGGAGAGGA					PREDICTED: Homo sapiens hypothetical protein LOC649327 (LOC649327), mRNA.					
Homo sapiens	RefSeq	XM_943623.1	ILMN_39130	LOC649217	XM_943623.2	XM_943623.2		649217	113429652	XM_943623.2	LOC649217	XP_948716.2	ILMN_1698813	0001940367	S	843	GGTCGTGTCTGACCGCGGGTGTCCACGCAACACCTCTGCAGTTTCACTTT					PREDICTED: Homo sapiens similar to procollagen, type II, alpha 1 (LOC649217), mRNA.					
Homo sapiens	RefSeq	NM_001084.4	ILMN_9049	PLOD3	NM_001084.4	NM_001084.4		8985	62739167	NM_001084.4	PLOD3	NP_001075.1	ILMN_1774836	0000160630	S	2801	ACTGAATATGTCACCTTGCTCCCAAGACACGGCCCTCTCAGGAAGCTCCC	7	-	100849384-100849433	7q22.1d	Homo sapiens procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 (PLOD3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9724729] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the rough endoplasmic reticulum [goid 30867] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9724729] [evidence TAS]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Catalysis of the reaction: procollagen L-lysine + 2-oxoglutarate + O2 = procollagen 5-hydroxy-L-lysine + succinate + CO2 [goid 8475] [pmid 9724729] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LH3	LH3
Homo sapiens	RefSeq	NM_001103175.1	ILMN_334318	CCDC64B	NM_001103175.1	NM_001103175.1		146439	157042791	NM_001103175.1	CCDC64B	NP_001096645.1	ILMN_3235171	0001240719	S	1646	CCCAGATTGTCTTCCAAAAGAAGCTGATGCCCTCCCCGCCCCAGGATGCT	16	-	3077983-3078032	16p13.3d	Homo sapiens coiled-coil domain containing 64B (CCDC64B), mRNA.				MGC158069	MGC158069
Homo sapiens	RefSeq	NM_176071.1	ILMN_16592	P2RY2	NM_176071.1	NM_176071.1		5029	28872742	NM_176071.1	P2RY2	NP_788085.1	ILMN_2297854	0007380343	I	128	CGCATAACTGGACGGCTTGAACGCGCCTGTGGGTCCGTGGTTGAACTTTG	11	+	72607277-72607326	11q13.4b	Homo sapiens purinergic receptor P2Y, G-protein coupled, 2 (P2RY2), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8159738] [evidence TAS]	The regulation of the levels, transport, and metabolism of ions within a cell or between a cell and its external environment [goid 6873] [pmid 8159738] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 8159738] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7779087] [evidence TAS]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2U; MGC40010; P2RU1; P2Y2R; P2Y2; P2U1; P2UR; MGC20088; HP2U	P2U; MGC40010; P2RU1; P2Y2R; P2Y2; P2U1; P2UR; MGC20088; HP2U
Homo sapiens	RefSeq	NM_176071.1	ILMN_16592	P2RY2	NM_176071.1	NM_176071.1		5029	28872742	NM_176071.1	P2RY2	NP_788085.1	ILMN_1723535	0004040762	A	2256	CGTTCCCTTCTGCCACCTGCCTTCTCACTAGCTGTCTCAGGAGTAGTCTC	11	+	72624709-72624758	11q13.4b	Homo sapiens purinergic receptor P2Y, G-protein coupled, 2 (P2RY2), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8159738] [evidence TAS]	The regulation of the levels, transport, and metabolism of ions within a cell or between a cell and its external environment [goid 6873] [pmid 8159738] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 8159738] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7779087] [evidence TAS]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2U; MGC40010; P2RU1; P2Y2R; P2Y2; P2U1; P2UR; MGC20088; HP2U	P2U; MGC40010; P2RU1; P2Y2R; P2Y2; P2U1; P2UR; MGC20088; HP2U
Homo sapiens	RefSeq	XM_942512.1	ILMN_39076	LOC652828	XM_942512.1	XM_942512.1		652828	89064829	XM_942512.1	LOC652828	XP_947605.1	ILMN_1775781	0002900609	S	230	AGCCTGCGGCACCCTTGCCCTTTGTGCCATCTTCACCAGTTCCTTCCGTT					PREDICTED: Homo sapiens hypothetical LOC652828 (LOC652828), mRNA.					
Homo sapiens	RefSeq	XM_945015.1	ILMN_34812	LOC284577	XM_945015.2	XM_945015.2		284577	113412557	XM_945015.2	LOC284577	XP_950108.1	ILMN_1785180	0007050762	A	2813	TCACCTCAGACAAGGGGTGCATCAGGGACCTGGCTGGAGGATCAAGCACA				1q32.1g	PREDICTED: Homo sapiens hypothetical protein LOC284577 (LOC284577), mRNA.					
Homo sapiens	RefSeq	XM_001717688.1	ILMN_340940	LOC100130837	XM_001717688.1	XM_001717688.1		100130837	169191007	XM_001717688.1	LOC100130837	XP_001717740.1	ILMN_3183517	0000770307	A	249	GTGGGGTGTTCCACGCTATGTTGGGAGTGTTCGCTTTCGAGCCAATGGTG	10	+	1085541-1085581:1092288-1092296	10p15.3c	PREDICTED: Homo sapiens hypothetical protein LOC100130837 (LOC100130837), mRNA.					
Homo sapiens	RefSeq	XM_942132.1	ILMN_16714	GALNT9	NM_021808.2	NM_021808.2		50614	38327555	NM_021808.2	GALNT9	NP_068580.2	ILMN_1708925	0006980553	A	1419	CGGCCGCTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGC	12	-	131247128-131247177	12q24.33c	Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9) (GALNT9), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 10978536] [evidence NAS]	Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [pmid 10978536] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GALNAC-T9	
Homo sapiens	RefSeq	NM_021808.2	ILMN_16714	GALNT9	NM_021808.2	NM_021808.2		50614	38327555	NM_021808.2	GALNT9	NP_068580.2	ILMN_1653687	0005340136	I	1484	AAGAGGGGTGCTGGAGGACATGGACAGCGACAAACCTGAGGCCGTGTCTA	12	-	131247063-131247112	12q24.33c	Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9) (GALNT9), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 10978536] [evidence NAS]	Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [pmid 10978536] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GALNAC-T9	GALNAC-T9
Homo sapiens	RefSeq	NM_021808.2	ILMN_16714	GALNT9	NM_021808.2	NM_021808.2		50614	38327555	NM_021808.2	GALNT9	NP_068580.2	ILMN_1749379	0005360056	A	862	GGGCCACGGGCCGCTGCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTT	12	-	131247685-131247734	12q24.33c	Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9) (GALNT9), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 10978536] [evidence NAS]	Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [pmid 10978536] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GALNAC-T9	GALNAC-T9
Homo sapiens	RefSeq	NM_001012339.2	ILMN_15183	DNAJC21	NM_001012339.2	NM_001012339.2		134218	68077165	NM_001012339.2	DNAJC21	NP_001012339.2	ILMN_2347323	0006060168	A	5716	GACAAGGAAATGTTTGCAATGCATGGAACTGTCAAAGGATTCGTATCTGG	5	+	34958712-34958761	5p13.2d	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 21 (DNAJC21), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	JJJ1; DNAJA5; GS3	JJJ1; DNAJA5; GS3
Homo sapiens	RefSeq	XM_942276.1	ILMN_35969	DHX40	XM_942276.1	XM_942276.1		79665	89042828	XM_942276.1	DHX40	XP_947369.1	ILMN_1794379	0007200347	I	1543	GGCTCAAGCAATCCTCCTGCTTTGTCTTGCTCTGTCATCCAGGGTGGAAG				17q23.1a	PREDICTED: Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 40, transcript variant 2 (DHX40), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_015456.2	ILMN_5079	COBRA1	NM_015456.2	NM_015456.2		25920	20070259	NM_015456.2	COBRA1	NP_056271.2	ILMN_1742432	0006940408	A	2109	AAAGCGAGGCACACTGCTTACTGCCTTGGGGTTGTGGAGATGGACCCGTG	9	+	139287552-139287601	9q34.3f	Homo sapiens cofactor of BRCA1 (COBRA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	RP13-122B23.3; DKFZP586B0519; NELF-B; NELFB	DKFZP586B0519; NELFB; RP13-122B23.3; NELF-B
Homo sapiens	RefSeq	NM_015456.2	ILMN_5079	COBRA1	NM_015456.2	NM_015456.2		25920	20070259	NM_015456.2	COBRA1	NP_056271.2	ILMN_2290007	0006380044	I	626	TGACGCGGATGGTGGGGAAGAACGTGAAGCTGTACGACATGGTGCTGCAG	9	+	139277323-139277372	9q34.3f	Homo sapiens cofactor of BRCA1 (COBRA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	RP13-122B23.3; DKFZP586B0519; NELF-B; NELFB	DKFZP586B0519; NELFB; RP13-122B23.3; NELF-B
Homo sapiens	RefSeq	NM_015456.2	ILMN_5079	COBRA1	NM_015456.2	NM_015456.2		25920	20070259	NM_015456.2	COBRA1	NP_056271.2	ILMN_2399328	0006860113	A	1958	CCAGGGCAGAGCCTCTCCTTGTACTTTGGCAGCCATAGAAAGCGTGCTCA	9	+	139287401-139287450	9q34.3f	Homo sapiens cofactor of BRCA1 (COBRA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	RP13-122B23.3; DKFZP586B0519; NELF-B; NELFB	DKFZP586B0519; NELFB; RP13-122B23.3; NELF-B
Homo sapiens	RefSeq	XM_946051.1	ILMN_40279	LOC652821	XM_946051.2	XM_946051.2		652821	113430264	XM_946051.2	LOC652821	XP_951144.1	ILMN_1677803	0006100369	S	242	CTTTCCAAAAGAGCAAGCAGCACTCCACCCACCAGTGTGACTCTCAACCC					PREDICTED: Homo sapiens hypothetical LOC652821 (LOC652821), mRNA.					
Homo sapiens	Unigene	Hs.537451	ILMN_103303	HS.537451	Hs.537451		Hs.537451		22681316	BU167332			ILMN_1859259	0002900598	S	629	CCATGTGAGGGCAGTGTGCATGAAAGTGTGCTGGGAAAGTTCTATGGATC	2	+	104688348-104688397		AGENCOURT_7971794 NIH_MGC_67 Homo sapiens cDNA clone IMAGE:6169756 5, mRNA sequence					
Homo sapiens	RefSeq	NM_019089.3	ILMN_178196	HES2	NM_019089.3	NM_019089.3		54626	63055046	NM_019089.3	HES2	NP_061962.2	ILMN_2094266	0007100136	S	3968	ACTCCTGCAGTCTGGGATCCTGAGTGTCCTGTGGGTTCATCTCGGATGGG	1	-	6398123-6398172	1p36.31a	Homo sapiens hairy and enhancer of split 2 (Drosophila) (HES2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	NM_144779.1	ILMN_10835	FXYD5	NM_144779.1	NM_144779.1		53827	47778937	NM_144779.1	FXYD5	NP_659003.1	ILMN_2235975	0003400278	I	777	GGTCGGTCTCACTGACATCATGGCTGACCCCAGCATCGCCTGGTCCCACA	19	+	40338243-40338292	19q13.12a	Homo sapiens FXYD domain containing ion transport regulator 5 (FXYD5), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11756660] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell [goid 30033] [pmid 11756660] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of calcium-dependent cell-cell adhesion [goid 46588] [pmid 11756660] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11756660] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [pmid 11756660] [evidence IDA]	dysad; OIT2; PRO6241; HSPC113; RIC; IWU1; KCT1; IWU-1	dysad; OIT2; PRO6241; HSPC113; RIC; IWU1; KCT1; IWU-1
Homo sapiens	RefSeq	NM_014164.4	ILMN_10835	FXYD5	NM_144779.1	NM_144779.1		53827	47778937	NM_144779.1	FXYD5	NP_659003.1	ILMN_1704286	0001470332	A	1463	TGGCCAGAGAGGGAAGACACAGATGATGAAGCTGGAGCCAGGGCTGCCGG	19	+	40352457-40352506	19q13.12a	Homo sapiens FXYD domain containing ion transport regulator 5 (FXYD5), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11756660] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Formation of a microvillus, a thin cylindrical membrane-covered projection on the surface of a cell [goid 30033] [pmid 11756660] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of calcium-dependent cell-cell adhesion [goid 46588] [pmid 11756660] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11756660] [evidence IDA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [pmid 11756660] [evidence IDA]	dysad; OIT2; PRO6241; HSPC113; RIC; IWU1; KCT1; IWU-1	dysad; OIT2; PRO6241; HSPC113; RIC; IWU1; KCT1; IWU-1
Homo sapiens	RefSeq	NM_013333.2	ILMN_22968	EPN1	NM_013333.2	NM_013333.2		29924	41350200	NM_013333.2	EPN1	NP_037465.2	ILMN_1772981	0006370025	S	2285	CCCTCACGCACCCGCTCACGCACCCTCGGTGAATCCTTGGTGATGATTTT	19	+	60898855-60898904	19q13.42c	Homo sapiens epsin 1 (EPN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12218189] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10567358] [evidence EXP]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 9723620] [evidence TAS]	Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Homo sapiens	RefSeq	XM_001718451.1	ILMN_348645	LOC100133756	XM_001718451.1	XM_001718451.1		100133756	169218295	XM_001718451.1	LOC100133756	XP_001718503.1	ILMN_3246474	0002230471	S	277	TCGCCGTCCAGGGCATCGCTGACGAGGATGCAGTCCAGCTCATTGCTGAC					PREDICTED: Homo sapiens hypothetical protein LOC100133756 (LOC100133756), partial mRNA.					
Homo sapiens	RefSeq	NM_016523.1	ILMN_25563	KLRF1	NM_016523.1	NM_016523.1		51348	7705573	NM_016523.1	KLRF1	NP_057607.1	ILMN_2055781	0000060619	S	1174	ACTTTGTTTCCAGGCTTTTGCTACTCTTCACTCAGCTACAATAAACATCC	12	+	9888803-9888852	12p13.31a	Homo sapiens killer cell lectin-like receptor subfamily F, member 1 (KLRF1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10671213] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10671213] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10671213] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 10671213] [evidence TAS]	MGC119907; CLEC5C; MGC119908; MGC119909	MGC119907; CLEC5C; MGC119908; MGC119909
Homo sapiens	RefSeq	NM_016523.1	ILMN_25563	KLRF1	NM_016523.1	NM_016523.1		51348	7705573	NM_016523.1	KLRF1	NP_057607.1	ILMN_1685521	0004250630	S	584	GGGCTTAACTTTACCTCCTTGAAAATGACATGGACTTGGGTGGATGGTTC	12	+	9886229-9886278	12p13.31a	Homo sapiens killer cell lectin-like receptor subfamily F, member 1 (KLRF1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10671213] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10671213] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10671213] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 10671213] [evidence TAS]	MGC119907; CLEC5C; MGC119908; MGC119909	MGC119907; CLEC5C; MGC119908; MGC119909
Homo sapiens	RefSeq	XM_001716975.1	ILMN_345031	LOC100133138	XM_001716975.1	XM_001716975.1		100133138	169207020	XM_001716975.1	LOC100133138	XP_001717027.1	ILMN_3210806	0004890091	A	167	GGCAGCAGATCTCCAGCGGTGAAGACGTAGAGCACCGGGTTGACGCTAGA	14	-	23850550-23850599	14q12a	PREDICTED: Homo sapiens hypothetical protein LOC100133138 (LOC100133138), mRNA.					
Homo sapiens	RefSeq	NM_152279.2	ILMN_19168	ZNF585B	NM_152279.2	NM_152279.2		92285	25014092	NM_152279.2	ZNF585B	NP_689492.2	ILMN_1773835	0002750041	S	86	GCCGAGAGGTCTCTGTGACGATTTTGGTTCTTGGGTGTCTCTGGGGAGTC	19	-	42389972-42389996:42393183-42393207	19q13.12c	Homo sapiens zinc finger protein 585B (ZNF585B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14928; SZFP41	FLJ14928; SZFP41
Homo sapiens	RefSeq	NM_001298.1	ILMN_177183	CNGA3	NM_001079878.1	NM_001079878.1		1261	120433599	NM_001079878.1	CNGA3	NP_001073347.1	ILMN_1722135	0005090091	S	3368	GCCCATTCACCCATGAAGAGGAAGCCTCAAGATCCCTTGGAATTGCATCC	2	+	98381070-98381119	2q11.2c	Homo sapiens cyclic nucleotide gated channel alpha 3 (CNGA3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9517456] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9662398] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transmembrane transfer of a cation by a channel that opens when intracellular cyclic nucleotide has been bound by the channel complex or one of its constituent parts [goid 5221] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts [goid 15276] [pmid 9517456] [evidence TAS]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]	CNCG3; CCNC1; CCNCa; CCNCalpha; CNG3; ACHM2	CNCG3; CCNC1; CCNCa; CCNCalpha; CNG3; ACHM2
Homo sapiens	Unigene	Hs.573905	ILMN_126086	HS.573905	Hs.573905		Hs.573905		1295481	W19582			ILMN_1914249	0000460594	S	436	CTAAGAATCCACTGACTGGTGATCTGTAAGCTCCTACTCCACAGGGGGTC	11	+	127558179-127558212:127558215-127558230		zb31c09.r1 Soares_parathyroid_tumor_NbHPA Homo sapiens cDNA clone IMAGE:305200 5, mRNA sequence					
Homo sapiens	Unigene	Hs.135690	ILMN_77688	HS.135690	Hs.135690		Hs.135690		27879963	BX115137			ILMN_1916786	0001300292	S	202	CCAGATACGAATGTTGTGGGTGGCAGCAGAAAAACCCAGCACCTGGGCTC	11	+	37932618-37932667		BX115137 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998B044007, mRNA sequence					
Homo sapiens	RefSeq	NR_015399.1	ILMN_369931	LOC150568	NR_015399.1	NR_015399.1		150568	210032802	NR_015399.1	LOC150568		ILMN_3235567	0004220497	S	1072	CAAGGAATGCAGAAGAGAGCAGAGGCCACAAAAACAGCAGCAACGTGTCC	2	+	105128782-105128831		Homo sapiens hypothetical LOC150568 (LOC150568), non-coding RNA.					
Homo sapiens	RefSeq	XM_929289.1	ILMN_36798	LOC646361	XM_929289.1	XM_929289.1		646361	89031630	XM_929289.1	LOC646361	XP_934382.1	ILMN_1667072	0000380300	S	121	GTCACCAAGAGGCTCAAGGTTCAGCCAGTAGGAAAACTCTTAAGGTTCCT	10	+	124415455-124415493:124416802-124416812		PREDICTED: Homo sapiens hypothetical protein LOC646361 (LOC646361), mRNA.					
Homo sapiens	RefSeq	NM_031964.1	ILMN_19903	KRTAP17-1	NM_031964.1	NM_031964.1		83902	13994371	NM_031964.1	KRTAP17-1	NP_114170.1	ILMN_1713715	0004180564	S	656	GACATCCTCTTCTTCAAGGTGTCTTTGGGACTGATCCTCCGCCCTGGCTT	17	-	39471242-39471291	17q21.2b	Homo sapiens keratin associated protein 17-1 (KRTAP17-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP17.1; KRTAP16.1; KRTAP17.1	KAP17.1; KRTAP16.1; KRTAP17.1
Homo sapiens	RefSeq	NM_006915.1	ILMN_28618	RP2	NM_006915.1	NM_006915.1		6102	5902059	NM_006915.1	RP2	NP_008846.1	ILMN_1659255	0002710332	S	2677	TTGAGCGCTCACCCTGTGCGTGGCCTTGTGCTAACCATTAGCACTGCATC	X	+	46625612-46625661	Xp11.3a	Homo sapiens retinitis pigmentosa 2 (X-linked recessive) (RP2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; Folding of the microtubule constituent protein beta-tubulin [goid 7025] [pmid 9697692] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9697692] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9697692] [evidence TAS]	KIAA0215; TBCCD2	KIAA0215; TBCCD2
Homo sapiens	RefSeq	NM_052819.1	ILMN_19689	CARD14	NM_052819.1	NM_052819.1		79092	16507954	NM_052819.1	CARD14	NP_438170.1	ILMN_1738669	0006400092	I	1501	CCGTGGTGCTGCTGCCATGCGGCGCTTCTGACCAGGGGTTTTTGCATGAG	17	+	75787186-75787235	17q25.3d	Homo sapiens caspase recruitment domain family, member 14 (CARD14), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11278692] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11278692] [evidence NAS]	Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [pmid 11278692] [evidence IDA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 11278692] [evidence NAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a CARD (N-terminal caspase recruitment) domain, a protein-protein interaction domain that belongs to the death domain-fold superfamily. These protein molecule families are similar in structure with each consisting of six or seven anti-parallel alpha-helices that form highly specific homophilic interactions between signaling partners. CARD exists in the N-terminal prodomains of several caspases and in apoptosis-regulatory proteins and mediates the assembly of CARD-containing proteins that participate in activation or suppression of CARD carrying members of the caspase family [goid 50700] [pmid 11278692] [evidence IPI]	CARMA2; BIMP2	CARMA2; BIMP2
Homo sapiens	RefSeq	NM_002673.3	ILMN_22628	PLXNB1	NM_002673.3	NM_002673.3		5364	41152087	NM_002673.3	PLXNB1	NP_002664.2	ILMN_1742330	0006330438	S	6927	AGAGTTGAACGCCTCTCCTAGGCCACTACAAACTGACCCCTCAGCAGGGC	3	-	48420387-48420436	3p21.31e	Homo sapiens plexin B1 (PLXNB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10520995] [evidence NAS]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10520995] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 10520995] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 17154] [pmid 10520995] [evidence TAS]; Interacting selectively with semaphorin receptors [goid 30215] [pmid 10520995] [evidence TAS]	PLXN5; PLEXIN-B1; KIAA0407; SEP	PLXN5; PLEXIN-B1; KIAA0407; SEP
Homo sapiens	RefSeq	XM_032571.7	ILMN_35307	KIAA0888	XM_032571.7	XM_032571.7		26049	88988241	XM_032571.7	KIAA0888	XP_032571.4	ILMN_1674663	0003120224	A	6555	GAACACTGGTGGTTTTTTCAGGAAATTGCTGAATACCCACTCACAAATGC				5q13.3b	PREDICTED: Homo sapiens KIAA0888 protein, transcript variant 1 (KIAA0888), mRNA.					
Homo sapiens	RefSeq	NM_004361.2	ILMN_11656	CDH7	NM_004361.2	NM_004361.2		1005	16306488	NM_004361.2	CDH7	NP_004352.2	ILMN_1716300	0004050364	I	151	CAGCCGAGCGCACGTTCTTTCGGATGCACACGCCCGGGTCCCTGGCGTCT	18	+	61569287-61569336	18q22.1c	Homo sapiens cadherin 7, type 2 (CDH7), transcript variant b, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDH7L1	CDH7L1
Homo sapiens	RefSeq	NM_005986.2	ILMN_172656	SOX1	NM_005986.2	NM_005986.2		6656	30179899	NM_005986.2	SOX1	NP_005977.2	ILMN_1716070	0000240471	S	3977	AGTAGGCCCTGAGCCGACTGTGAATTCGGTGCTTGGCCAAGGTAACACTC	13	+	111773890-111773939	13q34c	Homo sapiens SRY (sex determining region Y)-box 1 (SOX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9337405] [evidence NAS]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [pmid 9337405] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9337405] [evidence NAS]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9337405] [evidence NAS]		
Homo sapiens	RefSeq	XM_001718413.1	ILMN_350664	LOC100130496	XM_001718413.1	XM_001718413.1		100130496	169215853	XM_001718413.1	LOC100130496	XP_001718465.1	ILMN_3247885	0002810129	S	49	CGAACGGTGGCCGGCGTTGCCGCCAGGGGACGCTCGGGCCGCAGGAGGTC					PREDICTED: Homo sapiens hypothetical protein LOC100130496 (LOC100130496), mRNA.					
Homo sapiens	RefSeq	NM_024629.2	ILMN_16700	MLF1IP	NM_024629.2	NM_024629.2		79682	38016934	NM_024629.2	MLF1IP	NP_078905.2	ILMN_1679438	0002120678	S	2325	CAGTTCTGTGCACATACTTTTCAATACTCCCCGACGGAAGAGCAAGGGTG	4	-	185852388-185852437	4q35.1e	Homo sapiens MLF1 interacting protein (MLF1IP), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]		CENPU; KLIP1; FLJ23468; CENP-50; CENP50; PBIP1; CENP-U(50); CENP-U	CENPU; KLIP1; FLJ23468; CENP-50; CENP50; PBIP1; CENP-U(50); CENP-U
Homo sapiens	RefSeq	NM_001012710.1	ILMN_26784	KRTAP5-10	NM_001012710.1	NM_001012710.1		387273	60593039	NM_001012710.1	KRTAP5-10	NP_001012728.1	ILMN_1703708	0002710403	S	699	ATTAATTCATCCCACGCATCCTCCCTGAGGCACCTGCCCCTTCTCCAGCT	11	+	70954955-70955004	11q13.4a	Homo sapiens keratin associated protein 5-10 (KRTAP5-10), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	KRTAP5.10	KRTAP5.10
Homo sapiens	RefSeq	XR_015866.1	ILMN_169322	LOC731308	XR_015866.1	XR_015866.1		731308	113424930	XR_015866.1	LOC731308		ILMN_3229446	0006220224	A	453	AAATAGCCTACATCTGTATTTATTTTCTATTCCATACTTCTGCCTCACGT				14q31.1c	PREDICTED: Homo sapiens misc_RNA (LOC731308), miscRNA.					
Homo sapiens	RefSeq	XM_940248.1	ILMN_38716	LOC651118	XM_940248.1	XM_940248.1		651118	89042537	XM_940248.1	LOC651118	XP_945341.1	ILMN_1714427	0000150008	S	153	CTTCCTATTTGGCACCATTGATCCTAATGAGAGCAGGGTACCTGCGCCAG				17p11.2c	PREDICTED: Homo sapiens similar to GTP-binding protein PTD004 isoform a (LOC651118), mRNA.					
Homo sapiens	RefSeq	XM_373973.3	ILMN_42735	LOC388923	XM_373973.3	XM_373973.3		388923	88952959	XM_373973.3	LOC388923	XP_373973.3	ILMN_1762235	0001850112	S	235	GCCTGTGTGGGTCCAGGACAAGAGGAGCACCAGAAGCTCCTGGAGGGCGG	2	-	3464637-3464663:3464924-3464946	2p25.3b	PREDICTED: Homo sapiens hypothetical LOC388923 (LOC388923), mRNA.					
Homo sapiens	RefSeq	NM_012126.1	ILMN_42489	LOC645799	XM_928789.2	XM_928789.2		645799	113426192	XM_928789.2	LOC645799	XP_933882.2	ILMN_1759614	0002120646	I	392	GCTGCAGCAGAAGCAGCCGCTGAGCTGTGGTGGCCTAGATGCCCGATACA	16	-	74096081-74096130	16q23.1a	PREDICTED: Homo sapiens similar to carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 (LOC645799), mRNA.					FLJ22167; ALYE870; PRO1886; MGC74625
Homo sapiens	RefSeq	NM_004740.3	ILMN_17429	TIAF1	NM_004740.3	NM_004740.3		9220	42741656	NM_004740.3	TIAF1	NP_004731.2	ILMN_2055634	0003780041	S	2045	CCCCTGTTTACCCGATGTATGGAAATAAAGGCCCTTTTCCTCCTGAAAAA	17	-	24426748-24426753:27400539-27400582	17q11.2b	Homo sapiens TGFB1-induced anti-apoptotic factor 1 (TIAF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9918798] [evidence NAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9918798] [evidence IDA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 9918798] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MYO18A; MAJN; MYSPDZ; SPR210	MYSPDZ; SPR210; MYO18A; MAJN
Homo sapiens	RefSeq	NM_004740.3	ILMN_17429	TIAF1	NM_004740.3	NM_004740.3		9220	42741656	NM_004740.3	TIAF1	NP_004731.2	ILMN_1669507	0006400554	S	584	TGGCTTTTGGGGAGTGCTCTGACGCAGCTTTGTGGGCCTCCAGAACCAAA	17	-	27401994-27402043	17q11.2b	Homo sapiens TGFB1-induced anti-apoptotic factor 1 (TIAF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9918798] [evidence NAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9918798] [evidence IDA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 9918798] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MYO18A; MAJN; MYSPDZ; SPR210	MYSPDZ; SPR210; MYO18A; MAJN
Homo sapiens	RefSeq	XM_934073.1	ILMN_42545	LOC646947	XM_934073.1	XM_934073.1		646947	89029240	XM_934073.1	LOC646947	XP_939166.1	ILMN_1775368	0003890497	S	330	TCCGGCGGATGTTTTCCTTGTTCCCAAGCGTGTAGTGCGCGCCAGCCGCC	9	-	35747046-35747095	9p13.3a	PREDICTED: Homo sapiens hypothetical LOC646947 (LOC646947), mRNA.					
Homo sapiens	RefSeq	NM_001012329.1	ILMN_23888	CTNNBIP1	NM_020248.2	NM_020248.2		56998	59889553	NM_020248.2	CTNNBIP1	NP_064633.1	ILMN_1688103	0000430259	A	2730	AGTCAGGTGTCGAGGCCACATTGCTGGCTGCCCCCTCTTTGTAGCTCCTA	1	-	9908549-9908598	1p36.22d	Homo sapiens catenin, beta interacting protein 1 (CTNNBIP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10898789] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10898789] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10898789] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10898789] [evidence TAS]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IEA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IEA]	MGC15093; ICAT	MGC15093; ICAT
Homo sapiens	RefSeq	NM_018304.1	ILMN_32619	PRR11	NM_018304.2	NM_018304.2		55771	88703044	NM_018304.2	PRR11	NP_060774.2	ILMN_1782403	0002370072	S	1093	GCTGGCTCACCCTAGAAGCCCAACTCCAACTCTGCCACTTTCTACAAGCA	17	+	54629932-54629932:54633706-54633754	17q22d	Homo sapiens proline rich 11 (PRR11), mRNA.				FLJ11029	FLJ11029
Homo sapiens	RefSeq	NM_001033677.1	ILMN_22852	CABP1	NM_004276.3	NM_004276.3		9478	38176289	NM_004276.3	CABP1	NP_004267.2	ILMN_1677746	0006100598	A	719	CGGACCCCCACCCCTCCGCACTGTGAAAGACTAACTCCTGCAACTGGAAA	12	+	119589231-119589280	12q24.31a	Homo sapiens calcium binding protein 1 (CABP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The post synaptic density is a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse. It forms a disc that consists of a range of proteins with different functions, some of which contact the cytoplasmic domains of ion channels in the postsynaptic membrane. The proteins making up the disc include receptors, and structural proteins linked to the actin cytoskeleton. They also include signalling machinery, such as protein kinases and phosphatases [goid 14069] [pmid 15140941] [evidence IDA]		Stops, prevents or reduces the activity of an enzyme [goid 4857] [pmid 9920909] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9920909] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 15980432] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CALBRAIN; HCALB_BR	CALBRAIN; HCALB_BR
Homo sapiens	RefSeq	NM_005347.2	ILMN_16546	HSPA5	NM_005347.2	NM_005347.2		3309	21361242	NM_005347.2	HSPA5	NP_005338.1	ILMN_1773865	0000870131	S	3804	CTAGGGCTAGTCTTCCCTTACCTCAAAGGCTCTCACTACCGTGGACCACC	9	-	127037007-127037056	9q33.3a	Homo sapiens heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (HSPA5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12665508] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16130169] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 12665508] [evidence TAS]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A cytosolic endopeptidase with specificity for the hydrolysis of aspartyl bonds. Caspases are involved in apoptosis [goid 8303] [pmid 12665508] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 12665508] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 12665508] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12665508] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose [goid 42149] [pmid 10085239] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 12665508] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 16130169] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12665508] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence NAS]; Interacting selectively with any part of a ribosome [goid 43022] [evidence IEA]; Stops, prevents or reduces the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43027] [pmid 12665508] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 16130169] [evidence TAS]	BIP; FLJ26106; MIF2; GRP78	BIP; FLJ26106; MIF2; GRP78
Homo sapiens	RefSeq	NM_021959.1	ILMN_17287	PPP1R11	NM_021959.2	NM_021959.2		6992	109637789	NM_021959.2	PPP1R11	NP_068778.1	ILMN_1747598	0000620376	A	1473	CCTAGACTTTGATTTCTCCGGCAGCCCAGATGTTCAGTTCTCTTGGCCCC	6	+	30037919-30037968	6p21.33b	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 11 (PPP1R11), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9843442] [evidence TAS]		Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TCTEX5; TCTE5; HCGV; MGC125741; HCG-V; MGC125742; MGC125743	TCTEX5; TCTE5; HCGV; MGC125741; HCG-V; MGC125742; MGC125743
Homo sapiens	RefSeq	NM_022146.1	ILMN_12384	NPFFR1	NM_022146.2	NM_022146.2		64106	118766333	NM_022146.2	NPFFR1	NP_071429.1	ILMN_1783336	0005390136	S	966	CAGCGCCAACCCCATCATCTACGGCTACTTCAACGAGAACTTCCGCCGCG	10	-	72014983-72015032	10q22.1a	Homo sapiens neuropeptide FF receptor 1 (NPFFR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a neuropeptide to initiate a change in cell activity [goid 8188] [pmid 11024015] [evidence NAS]	FLJ10751; NPFF1R1; NPFF1; GPR147; OT7T022	FLJ10751; NPFF1R1; NPFF1; GPR147; OT7T022
Homo sapiens	RefSeq	NM_016169.2	ILMN_23297	SUFU	NM_016169.2	NM_016169.2		51684	19923478	NM_016169.2	SUFU	NP_057253.2	ILMN_1804361	0002710397	S	4516	GATTGAGTTGCAAGCAGGGAGAAAACCTGAAGGTCGGTGCCCCTATGGGG	10	+	104381375-104381424	10q24.32b	Homo sapiens suppressor of fused homolog (Drosophila) (SUFU), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10559945] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10564661] [evidence NAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10559945] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10564661] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10564661] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10559945] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10564661] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10564661] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10564661] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10559945] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 10564661] [evidence IPI]	SUFUXL; PRO1280; SUFUH	SUFUXL; PRO1280; SUFUH
Homo sapiens	RefSeq	NR_002979.2	ILMN_363680	SNORA49	NR_002979.2	NR_002979.2		677829	194239669	NR_002979.2	SNORA49		ILMN_3235231	0000450682	S	83	CCCTCCCCAGTAAGACGCTGTTTTCTTTTGGGGCCTACAAGTTGAGCTGA	12	+	132515851-132515900	12q24.33c	Homo sapiens small nucleolar RNA, H/ACA box 49 (SNORA49), small nucleolar RNA.					
Homo sapiens	RefSeq	NM_005528.3	ILMN_364912	DNAJC4	NM_005528.3	NM_005528.3		3338	194248053	NM_005528.3	DNAJC4	NP_005519.2	ILMN_3307827	0003440288	S	952	ATGCTGGCGGGCATGGGCCTGCACTACATTGCCTTCAGGAAGGTGAAGCA	11	+	64000300-64000337:64001366-64001377	11q13.1a	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 4 (DNAJC4), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9473517] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9473517] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9473517] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 9473517] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9473517] [evidence NAS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]		
Homo sapiens	RefSeq	NM_020926.2	ILMN_16794	BCOR	NM_020926.2	NM_020926.2		54880	21071035	NM_020926.2	BCOR	NP_065977.1	ILMN_1676241	0006760273	I	3384	GCAATGTGGCCAGTAAGAGAACGTGAGTGGTAGCACTGAGGCGTGTCTGG	X	-	39816360-39816409	Xp11.4c	Homo sapiens BCL6 co-repressor (BCOR), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10898795] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 10898795] [evidence IDA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10898795] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10898795] [evidence IPI]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 10898795] [evidence IPI]	MGC131961; KIAA1575; FLJ20285; MGC71031; MCOPS2; FLJ38041; MAA2; ANOP2	MGC131961; MGC71031; MCOPS2; FLJ38041; MAA2; KIAA1575; FLJ20285; ANOP2
Homo sapiens	RefSeq	NM_002354.1	ILMN_4070	TACSTD1	NM_002354.1	NM_002354.1		4072	4505058	NM_002354.1	TACSTD1	NP_002345.1	ILMN_2160209	0006290241	S	1060	GGCAAAGTATGAGAAGGCTGAGATAAAGGAGATGGGTGAGATGCATAGGG	2	+	47465832-47465853:47467215-47467242	2p21a	Homo sapiens tumor-associated calcium signal transducer 1 (TACSTD1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1729376] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			EGP40; TROP1; KSA; hEGP-2; MK-1; CO17-1A; MIC18; M4S1; EGP; GA733-2; CD326; Ep-CAM	TROP1; MK-1; M4S1; CD326; Ep-CAM; EGP40; KSA; hEGP-2; CO17-1A; MIC18; EGP; GA733-2
Homo sapiens	RefSeq	NM_002354.1	ILMN_4070	TACSTD1	NM_002354.1	NM_002354.1		4072	4505058	NM_002354.1	TACSTD1	NP_002345.1	ILMN_2160210	0004070575	S	974	GCTGGTGTTATTGCTGTTATTGTGGTTGTGGTGATAGCAGTTGTTGCTGG	2	+	47460550-47460599	2p21a	Homo sapiens tumor-associated calcium signal transducer 1 (TACSTD1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1729376] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			EGP40; TROP1; KSA; hEGP-2; MK-1; CO17-1A; MIC18; M4S1; EGP; GA733-2; CD326; Ep-CAM	TROP1; MK-1; M4S1; CD326; Ep-CAM; EGP40; KSA; hEGP-2; CO17-1A; MIC18; EGP; GA733-2
Homo sapiens	RefSeq	NM_005635.2	ILMN_169082	SSX1	NM_005635.2	NM_005635.2		6756	28559010	NM_005635.2	SSX1	NP_005626.1	ILMN_2247572	0006480563	I	981	GAACAGCACTATCCTCATCTCTCCCCAGATGTGACTACTGAGGGCAGTTC	X	+	48011551-48011600	Xp11.23e	Homo sapiens synovial sarcoma, X breakpoint 1 (SSX1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10072425] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10072425] [evidence TAS]	SSRC; MGC5162; MGC150425	SSRC; MGC5162; MGC150425
Homo sapiens	RefSeq	NM_016451.3	ILMN_29067	COPB1	NM_016451.3	NM_016451.3		1315	34222324	NM_016451.3	COPB1	NP_057535.1	ILMN_1699112	0006980170	S	3028	CAGCATTGAGAAGCCAATTCACCAGGGACCAGATGCTGCTGTTACCGGCC	11	-	14436679-14436728	11p15.2b	Homo sapiens coatomer protein complex, subunit beta 1 (COPB1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 1840503] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [pmid 1840503] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8599108] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8533093] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1840503] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11031247] [evidence EXP]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat [goid 48205] [pmid 16956762] [evidence EXP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10199403] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	DKFZp761K102; COPB; FLJ10341	DKFZp761K102; COPB; FLJ10341
Homo sapiens	RefSeq	NM_000992.2	ILMN_10772	RPL29	NM_000992.2	NM_000992.2		6159	17105395	NM_000992.2	RPL29	NP_000983.1	ILMN_1771051	0002450167	S	2	TCCGGCGTTGTTGACCCTATTTCCCGTGCTGCACCGCAGCCCCTTTCTCT	3	-	52029907-52029956	3p21.1e	Homo sapiens ribosomal protein L29 (RPL29), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 8597591] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Attachment of the blastocyst to the uterine lining [goid 7566] [pmid 8662616] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8597591] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8597591] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 8662616] [evidence TAS]	HUMRPL29; MGC88589; HIP	HUMRPL29; MGC88589; HIP
Homo sapiens	RefSeq	NM_000992.2	ILMN_10772	RPL29	NM_000992.2	NM_000992.2		6159	17105395	NM_000992.2	RPL29	NP_000983.1	ILMN_1737517	0002350465	S	1	TTCCGGCGTTGTTGACCCTATTTCCCGTGCTGCACCGCAGCCCCTTTCTC	3	-	52029908-52029957	3p21.1e	Homo sapiens ribosomal protein L29 (RPL29), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 8597591] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Attachment of the blastocyst to the uterine lining [goid 7566] [pmid 8662616] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8597591] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8597591] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 8662616] [evidence TAS]	HUMRPL29; MGC88589; HIP	HUMRPL29; MGC88589; HIP
Homo sapiens	RefSeq	NM_000083.1	ILMN_173909	CLCN1	NM_000083.2	NM_000083.2		1180	119433676	NM_000083.2	CLCN1	NP_000074.2	ILMN_1686865	0000460370	S	2848	GATGTGATTGCTGCCTCCCCAGAGACCCCTGTGCCATCTCCTTCCCCAGA	7	+	142758974-142759023	7q34f	Homo sapiens chloride channel 1, skeletal muscle (CLCN1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9122265] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 1379744] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [pmid 9122265] [evidence TAS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC138361; MGC142055; CLC1	CLC1
Homo sapiens	Unigene	Hs.551253	ILMN_110557	HS.551253	Hs.551253		Hs.551253		11590645	BF507424			ILMN_1847159	0003930347	S	200	CAGGTGCAATCGGCTGCAGGAATTCAGATAATAGATGGGGGGAGGGGCTC	7	+	22120554-22120601		UI-H-BW1-amx-a-09-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3071153 3, mRNA sequence					
Homo sapiens	Unigene	Hs.98466	ILMN_74505	HS.98466	Hs.98466		Hs.98466		15939282	BI827719			ILMN_1866290	0003120577	S	683	GCTGTCTTCCTGTAACTGAGGGGGGTGTAACCATCCTTGTGGAAGCGTCC	16	+	50690394-50690443		603074169F1 NIH_MGC_119 Homo sapiens cDNA clone IMAGE:5166065 5, mRNA sequence					
Homo sapiens	RefSeq	NM_032123.4	ILMN_19843	KIRREL2	NM_032123.4	NM_032123.4		84063	40353745	NM_032123.4	KIRREL2	NP_115499.3	ILMN_2382245	0004250347	A	2077	CCTGGGATCTCCAACTTGCCATAATGGATTGTTCTGATTTCTGAGGAGCC	19	+	41049255-41049278:41049279-41049304	19q13.12a	Homo sapiens kin of IRRE like 2 (Drosophila) (KIRREL2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12837264] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 12837264] [evidence NAS]		NEPH3; NLG1; DKFZP564A1164; FILTRIN; MGC15718	DKFZP564A1164; MGC15718; NEPH3; NLG1; FILTRIN
Homo sapiens	RefSeq	NM_005502.2	ILMN_21049	ABCA1	NM_005502.2	NM_005502.2		19	21536375	NM_005502.2	ABCA1	NP_005493.2	ILMN_1766054	0004060358	S	10145	GTGCTCTTTGTTCATCATTGGCCCTCATTCCAAGCACTTTACGCTGTCTG	9	-	107543500-107543549	9q31.1d	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 1 (ABCA1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10525055] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 15469992] [evidence IDA]; A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis [goid 45335] [pmid 15469992] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The regulated release of a peptide from a cell or group of cells [goid 2790] [evidence IEA]; The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [pmid 15163665] [evidence IDA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 16443932] [evidence IMP]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [pmid 14747463] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30819] [pmid 14701824] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells [goid 32367] [pmid 10431236] [evidence IMP]; A series of molecular signals within the cell that are mediated by the Cdc42 protein switching to a GTP-bound active state [goid 32488] [pmid 16443932] [evidence IMP]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IEA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [pmid 11162594] [evidence IDA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [pmid 16702602] [evidence IMP]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [pmid 10431236] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 10431236] [evidence IDA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IEA]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IEA]; The regulated release of interleukin 1 beta from a cell or group of cells [goid 50702] [pmid 11855831] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of phospholipid within an organism or cell [goid 55091] [pmid 16702602] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a platelet dense granule. A platelet dense granule is an electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins [goid 60155] [pmid 15163665] [evidence IMP]; The regulated release of a peptide from a cell or group of cells [goid 2790] [evidence IEA]; The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [evidence IEA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IEA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [evidence IEA]; The translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer [goid 45332] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16192269] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 16702602] [evidence IC ]; Enables the directed movement of phospholipids into, out of, within or between cells. Phospholipids are a class of lipids containing phosphoric acid as a mono- or diester [goid 5548] [pmid 16702602] [evidence IDA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Interacting selectively with cholesterol (cholest-5-en-3-beta-ol); the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 15485] [pmid 12084722] [evidence IC ]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [pmid 12084722] [evidence IDA]; Interacting selectively with the SNAP receptor syntaxin-13 [goid 30349] [pmid 15469992] [evidence IPI]; Interacting selectively with a small monomeric GTPase [goid 31267] [pmid 16443932] [evidence IPI]; Combining with apolipoprotein A-I to initiate a change in cell activity [goid 34188] [pmid 16443932] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	CERP; ABC-1; MGC164864; MGC165011; HDLDT1; ABC1; TGD; FLJ14958	CERP; ABC-1; MGC164864; MGC165011; HDLDT1; ABC1; TGD; FLJ14958
Homo sapiens	RefSeq	NM_033315.2	ILMN_12053	RASL10B	NM_033315.2	NM_033315.2		91608	28274693	NM_033315.2	RASL10B	NP_201572.1	ILMN_1788813	0004280021	S	2945	CCCAGGTCTTGGATTTCAGGTCCCTCCACCCCCATTCTGAGTCTCTGTCC	17	+	31094483-31094532	17q12b	Homo sapiens RAS-like, family 10, member B (RASL10B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RRP17; VTS58635; MGC47540	RRP17; VTS58635; MGC47540
Homo sapiens	RefSeq	XR_016298.1	ILMN_169317	LOC387825	XR_016298.1	XR_016298.1		387825	113423192	XR_016298.1	LOC387825		ILMN_3214087	0003400020	A	252	CATGTTGCATGTTAAAGCACCTGGCCTTCCTCCACAAGCGGATGAACTCC	12	-	3051376-3051425	12p13.33a-p13.32b	PREDICTED: Homo sapiens misc_RNA (LOC387825), miscRNA.					
Homo sapiens	RefSeq	XR_016298.1	ILMN_169317	LOC387825	XR_016298.1	XR_016298.1		387825	113423192	XR_016298.1	LOC387825		ILMN_3233442	0002230767	I	819	TGCCGCAGGCAGTCTGGGACATAGGAAGCTGGGAGCAAGGAAAGGGTCTT	12	-	3050809-3050858	12p13.33a-p13.32b	PREDICTED: Homo sapiens misc_RNA (LOC387825), miscRNA.					
Homo sapiens	RefSeq	NM_018267.2	ILMN_16260	H2AFJ	NM_018267.2	NM_018267.2		55766	29553976	NM_018267.2	H2AFJ	NP_060737.1	ILMN_2253065	0002570561	I	2076	GTAAAGTGAGTAGCGGTAGTTGATGGGAGCTGTTGAAACAGGTAAACAGC	12	+	14822023-14822072	12p12.3e	Homo sapiens H2A histone family, member J (H2AFJ), transcript variant 1, mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ10903; MGC921	FLJ10903; MGC921
Homo sapiens	Unigene	Hs.146852	ILMN_78398	HS.146852	Hs.146852		Hs.146852		3424702	AI086279			ILMN_1890063	0007200730	S	180	GCTCTTTGGGGGCAGCAAGAACCCGTCCTTGCCAGTCTCTTAAAGATGAC	14	-	85152188-85152237		oz40h01.s1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1677841 3, mRNA sequence					
Homo sapiens	Unigene	Hs.207074	ILMN_81933	HS.207074	Hs.207074		Hs.207074		23272917	BC029043			ILMN_1863668	0000940524	S	519	AGAGGCCACCCTTTGCGGCAGGGACCAGGTGGCAAGTGCTGTGCATTAAT	9	+	71478004-71478053		Homo sapiens, clone IMAGE:5194137, mRNA					
Homo sapiens	RefSeq	NM_017874.2	ILMN_18341	C20ORF27	NM_001039140.1	NM_001039140.1		54976	85362736	NM_001039140.1	C20orf27	NP_001034229.1	ILMN_1697363	0002750647	S	1276	GAGGTGCAGTCCCCAGCCCCCACCCCTCAGGTCTGTGTTACTTGGTTTTT	20	-	3734208-3734257	20p13b	Homo sapiens chromosome 20 open reading frame 27 (C20orf27), mRNA.				FLJ20550	FLJ20550
Homo sapiens	RefSeq	XR_017337.2	ILMN_174369	LOC644037	XR_017337.2	XR_017337.2		644037	169167694	XR_017337.2	LOC644037		ILMN_3274351	0006840520	M	600	GCCCCGTCACAGCAAGAGATGGATAGTGCTTCATCCAGCCAAAGAGGTCG	5	-	79691027-79691076	5q14.1e	PREDICTED: Homo sapiens misc_RNA (LOC644037), miscRNA.					
Homo sapiens	RefSeq	XM_001722557.1	ILMN_343119	LOC100132228	XM_001722557.1	XM_001722557.1		100132228	169171039	XM_001722557.1	LOC100132228	XP_001722609.1	ILMN_3242223	0007200327	S	274	GTGCTCGTGTTACTGAACGTCAGAGTGGGCTGGCTGCTGGTGGCCGGGGC	7	+	74889432-74889481	7q11.23d	PREDICTED: Homo sapiens hypothetical protein LOC100132228 (LOC100132228), mRNA.					
Homo sapiens	RefSeq	XM_001721195.1	ILMN_345202	LOC729704	XM_001721195.1	XM_001721195.1		729704	169211740	XM_001721195.1	LOC729704	XP_001721247.1	ILMN_3226216	0000520142	A	287	ACGGAGGAAGTCCAGGTTGGAGAGGTGGTCTCCTTCTGTGAGCAGGTCCA				17q11.2c	PREDICTED: Homo sapiens hypothetical LOC729704 (LOC729704), mRNA.					
Homo sapiens	Unigene	Hs.563654	ILMN_116465	HS.563654	Hs.563654		Hs.563654		13723350	BG201663			ILMN_1893231	0002140132	S	464	GTCAAGCAGGGACTAAAGCCAGTCCAGATTCAATGGGAGGAGCCACAAGG	X	-	129563610-129563659		RST21004 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_080664.1	ILMN_43387	C14ORF126	NM_080664.2	NM_080664.2		112487	87162456	NM_080664.2	C14orf126	NP_542395.1	ILMN_1704238	0001030220	S	758	CACCTAAACTCTGGATCTCAGTCACCTTTTGTCCTACATTCCTCTACCCT	14	-	31917115-31917164	14q12e	Homo sapiens chromosome 14 open reading frame 126 (C14orf126), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of D-amino acids, the dextrorotatory isomer of amino acids [goid 19478] [evidence IEA]	Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	MGC9912	MGC9912
Homo sapiens	RefSeq	NR_030168.1	ILMN_387802	MIR511-2	NR_030168.1	NR_030168.1		574446	262205188	NR_030168.1	MIR511-2		ILMN_3310845	0001450487	S	9	CCCATCGTGTCTTTTGCTCTGCAGTCAGTAAATATTTTTTTGTGAATGTG					Homo sapiens microRNA 511-2 (MIR511-2), microRNA.					
Homo sapiens	RefSeq	NM_005454.2	ILMN_18621	CER1	NM_005454.2	NM_005454.2		9350	75677392	NM_005454.2	CER1	NP_005445.1	ILMN_1690192	0004780242	S	650	CCCATACCTCCTGCTCTCACTGTTTGCCTGCCAAGTTCACCACGATGCAC	9	-	14720237-14720286	9p22.3c	Homo sapiens cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis) (CER1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 17029022] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The establishment, maintenance and elaboration of the anterior/posterior axis [goid 9948] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IEA]; The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression) [goid 42074] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC119895; MGC96951; MGC119894; DAND4	MGC119895; MGC96951; MGC119894; DAND4
Homo sapiens	RefSeq	NM_152393.2	ILMN_7775	KBTBD5	NM_152393.2	NM_152393.2		131377	45593141	NM_152393.2	KBTBD5	NP_689606.2	ILMN_1754048	0003310458	S	2149	AGGGTGAGAAACTAGAGGCTTCTCCAGTGTTGCCATATCCCCCTAGGTTG	3	+	42708672-42708721	3p22.1a	Homo sapiens kelch repeat and BTB (POZ) domain containing 5 (KBTBD5), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC125350; SRYP; FLJ32015	MGC125350; SRYP; FLJ32015
Homo sapiens	RefSeq	NM_174922.3	ILMN_8656	ADCK5	NM_174922.3	NM_174922.3		203054	41393592	NM_174922.3	ADCK5	NP_777582.3	ILMN_1761309	0002480709	S	1670	TCAAGTTTGAAGTGGCGCTCAGGCTGGAGACCTTGGCCATGCGGCTGACC	8	+	145588894-145588915:145588992-145589019	8q24.3h	Homo sapiens aarF domain containing kinase 5 (ADCK5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC126708; FLJ35454	MGC126708; FLJ35454
Homo sapiens	RefSeq	NM_001039380.1	ILMN_25970	C10ORF25	NM_001039380.1	NM_001039380.1		220979	86439964	NM_001039380.1	C10orf25	NP_001034469.1	ILMN_2231921	0004760148	S	2922	ATGGATGTTACTGGAGGGTGCCACCTGGGGTCGGGGGGTGCAAAGGGGAA	10	-	45493252-45493301	10q11.21c	Homo sapiens chromosome 10 open reading frame 25 (C10orf25), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ30567	FLJ30567
Homo sapiens	RefSeq	NM_181334.3	ILMN_2156	LOC553158	NM_181334.3	NM_181334.3		553158	66346696	NM_181334.3	LOC553158	NP_851851.1	ILMN_2054070	0003890646	S	1	AGCATCCACAACGGGGTGATCGCCGTCTTCCAGCGCAAGGGGCTGCCCGA	22	+	43489133-43489182	22q13.31b	Homo sapiens PRR5-ARHGAP8 fusion (LOC553158), mRNA.					
Homo sapiens	RefSeq	NM_012191.2	ILMN_29898	NAT6	NM_012191.2	NM_012191.2		24142	46048438	NM_012191.2	NAT6	NP_036323.2	ILMN_1765001	0005910039	S	993	GAGGCCATCCAGGGCAAGGAACTGTCTTTCTGGTTCAATAGACTGCCCCG	3	-	50333985-50334033:50334034-50334034	3p21.31b	Homo sapiens N-acetyltransferase 6 (GCN5-related) (NAT6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HYAL3; FUS-2; FUS2	HYAL3; FUS-2; FUS2
Homo sapiens	RefSeq	XM_939844.1	ILMN_34002	LOC650761	XM_939844.1	XM_939844.1		650761	89037601	XM_939844.1	LOC650761	XP_944937.1	ILMN_1694127	0006760681	S	6	GTGTCTACCTTCTGCAGACTCCAATGGCTCAGGAACTGGGAATGCAGTGC					PREDICTED: Homo sapiens similar to T-cell receptor alpha chain V region CTL-L17 precursor (LOC650761), mRNA.					
Homo sapiens	RefSeq	NM_005174.2	ILMN_13957	ATP5C1	NM_005174.2	NM_005174.2		509	50345986	NM_005174.2	ATP5C1	NP_005165.1	ILMN_1701269	0004780450	A	424	AGCGAGGTTGCTACACTAACAGCAGCTGGGAAAGAAGTTATGCTTGTTGG	10	+	7841075-7841124	10p14d	Homo sapiens ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 (ATP5C1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled [goid 275] [pmid 8227057] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12887009] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8227057] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 4517936] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 12110673] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 8227057] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	ATP5CL1; ATP5C	ATP5CL1; ATP5C
Homo sapiens	RefSeq	NR_002201.1	ILMN_27691	FTHL3	NR_002201.1	NR_002201.1		2498	56912190	NR_002201.1	FTHL3		ILMN_2173835	0006450139	S	664	ACAAGTGAAGGCCATCAAAGAATTGGGTGACCACGTGACCAACATGCACG	2	-	27615730-27615779	2p23.3a	Homo sapiens ferritin, heavy polypeptide-like 3 (FTHL3), non-coding RNA.					
Homo sapiens	RefSeq	XM_940295.1	ILMN_308916	SEC14L5	NM_014692.1	NM_014692.1		9717	150010660	NM_014692.1	SEC14L5	NP_055507.1	ILMN_1687268	0006770543	A	6391	CTGCACGCGGCCCCGGACTGCTTTGAATGTGCTCCAACACGAGTTCGTAA	16	+	5009092-5009141	16p13.3b	Homo sapiens SEC14-like 5 (S. cerevisiae) (SEC14L5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	KIAA0420; PRELID4B	
Homo sapiens	RefSeq	NM_207181.1	ILMN_23183	NPHP1	NM_207181.1	NM_207181.1		4867	46397399	NM_207181.1	NPHP1	NP_997064.1	ILMN_1764127	0003140372	I	540	CCCATGAGAGATGGAAAGAAGTGTAAGTCATAGTCTCTGCCCTCAGGCAA	2	-	110293077-110293126	2q13b	Homo sapiens nephronophthisis 1 (juvenile) (NPHP1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10665934] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 12244321] [evidence NAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 9361039] [evidence TAS]; The actions or reactions of an organism in response to a visual stimulus [goid 7632] [pmid 12205563] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 12006559] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 12006559] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 12006559] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244321] [evidence IPI]	NPH1; JBTS4; SLSN1	NPH1; JBTS4; SLSN1
Homo sapiens	RefSeq	NM_000272.2	ILMN_23183	NPHP1	NM_207181.1	NM_207181.1		4867	46397399	NM_207181.1	NPHP1	NP_997064.1	ILMN_1784478	0005220110	A	17	AACTGGAGCAATCAGAGCACCGCAGCCAGGGAGATGCTGGCGAGACGACA	2	-	110319817-110319834:110319835-110319866	2q13b	Homo sapiens nephronophthisis 1 (juvenile) (NPHP1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10665934] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 12244321] [evidence NAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 9361039] [evidence TAS]; The actions or reactions of an organism in response to a visual stimulus [goid 7632] [pmid 12205563] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 12006559] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 12006559] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 12006559] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12244321] [evidence IPI]	NPH1; JBTS4; SLSN1	NPH1; JBTS4; SLSN1
Homo sapiens	Unigene	Hs.576042	ILMN_128223	HS.576042	Hs.576042		Hs.576042		82425353	DA938998			ILMN_1901723	0004920195	S	175	GACCTGCTTCAGGGGAGAAGGACAAGGGAAGTACAGCGCCTACAACAATG	1	-	101545009-101545034:101546411-101546434		DA938998 SPLEN2 Homo sapiens cDNA clone SPLEN2012410 5, mRNA sequence					
Homo sapiens	Unigene	Hs.543820	ILMN_107341	HS.543820	Hs.543820		Hs.543820		7930623	AW836649			ILMN_1884168	0001780386	S	390	ACGGAGTCTCGCTCTTTGGCCAGGCTGGAGCGAGACTCCACCTCaaaaaa	5	+	162777710-162777730		PM3-LT0032-090100-008-f10 LT0032 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XR_038372.1	ILMN_336466	LOC339843	XR_038372.1	XR_038372.1		339843	169165519	XR_038372.1	LOC339843		ILMN_3200906	0001690291	A	2439	GAGGTTACGTTGTGTGGCACACAGCAGGTTGACTTGGCAGATTGGCAGAG				3q12.1a	PREDICTED: Homo sapiens misc_RNA (LOC339843), miscRNA.					
Homo sapiens	RefSeq	NR_030406.1	ILMN_388272	MIR758	NR_030406.1	NR_030406.1		768212	262206361	NR_030406.1	MIR758		ILMN_3310955	0006350369	S	22	ACCAGAGAGCACACGCTTTATTTGTGCCGTTTGTGACCTGGTCCACTAAC				14q32.31a	Homo sapiens microRNA 758 (MIR758), microRNA.					
Homo sapiens	RefSeq	NM_012067.2	ILMN_173325	AKR7A3	NM_012067.2	NM_012067.2		22977	41152113	NM_012067.2	AKR7A3	NP_036199.2	ILMN_2145396	0000070484	S	1064	CTTCCGCTAGGCCCATCGTTTCTCAGGCTGCCCAAGGCTCTTCTGTAACA	1	-	19609184-19609224:19609225-19609233	1p36.13b	Homo sapiens aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) (AKR7A3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10383892] [evidence TAS]	The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [pmid 10383892] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [pmid 10383892] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 10383892] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AFAR2	AFAR2
Homo sapiens	RefSeq	XR_039303.1	ILMN_345909	LOC100131166	XR_039303.1	XR_039303.1		100131166	169218193	XR_039303.1	LOC100131166		ILMN_3211746	0004760110	A	512	CCTGCGATGGGGGTGCAAAGAGCCAGGGGAGGAAAGGGGGAGGTTCGCAG					PREDICTED: Homo sapiens misc_RNA (LOC100131166), miscRNA.					
Homo sapiens	RefSeq	XR_039303.1	ILMN_345909	LOC100131166	XR_039303.1	XR_039303.1		100131166	169218193	XR_039303.1	LOC100131166		ILMN_3288245	0006100201	M	15	GTAATCCCACGTAAGGTACCTGCCGTCGGAAGATTTGAACTTTCTACTTG					PREDICTED: Homo sapiens misc_RNA (LOC100131166), miscRNA.					
Homo sapiens	RefSeq	NM_033066.1	ILMN_12563	MPP4	NM_033066.1	NM_033066.1		58538	14780901	NM_033066.1	MPP4	NP_149055.1	ILMN_1705579	0000830452	S	2060	GCTCAGGAGGAGCCTCAGTGGGTACCAGCAACATGGATTTCCTCAGATAC	2	-	202218190-202218239	2q33.1f	Homo sapiens membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) (MPP4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DLG6; ALS2CR5	DLG6; ALS2CR5
Homo sapiens	RefSeq	XM_942713.1	ILMN_35628	LOC651881	XM_942713.1	XM_942713.1		651881	88947039	XM_942713.1	LOC651881	XP_947806.1	ILMN_1667171	0006980520	S	2239	GCTGGGTTTTTGCCAGATGACCTGGGGTGGAGTGACCAGTGCCTGGCTGA					PREDICTED: Homo sapiens hypothetical protein LOC651881 (LOC651881), mRNA.					
Homo sapiens	RefSeq	XM_940399.1	ILMN_43290	LOC442711	XM_940399.1	XM_940399.1		442711	89026236	XM_940399.1	LOC442711	XP_945492.1	ILMN_1655428	0004590414	A	532	GGAACCAGAAGTGAATGCAACACCCTCTCGCTCTCATTGCTCCTCTTCCC					PREDICTED: Homo sapiens similar to ADP-ribosylation factor 1 (LOC442711), mRNA.					
Homo sapiens	RefSeq	XM_937202.1	ILMN_40195	LOC648147	XM_937202.1	XM_937202.1		648147	89028680	XM_937202.1	LOC648147	XP_942295.1	ILMN_1812620	0005310246	S	741	CACTTGGACCAGGGACAATGGATTGGAGCTGGATGGATCCAGGCATGTGG					PREDICTED: Homo sapiens similar to peroxidasin (LOC648147), mRNA.					
Homo sapiens	RefSeq	NR_001287.1	ILMN_3528	LOC260340	NR_001287.1	NR_001287.1		260340	29150266	NR_001287.1	LOC260340		ILMN_1714895	0006420328	S	1766	TAAAAGCCTGTATAAGATATAGCCAGCTATGGTCTGTGGGCCAAATCCAG	11	-	109281994-109282043	11q22.3d	Homo sapiens processed pseudogene mtTFA 2 (LOC260340) on chromosome 11.					
Homo sapiens	RefSeq	NR_029857.1	ILMN_388156	MIR302B	NR_029857.1	NR_029857.1		442894	262206181	NR_029857.1	MIR302B		ILMN_3308768	0002810286	S	20	GGAAGTGCTTTCTGTGACTTTAAAAGTAAGTGCTTCCATGTTTTAGTAGG				4q25f	Homo sapiens microRNA 302b (MIR302B), microRNA.					
Homo sapiens	RefSeq	XM_928629.1	ILMN_3756	PSMC1	NM_002802.2	NM_002802.2		5700	24430150	NM_002802.2	PSMC1	NP_002793.2	ILMN_1710406	0000830608	A	44	GCAAGATGGGTCAAAGTCAGAGTGGTGGTCATGGTCCTGGAGGTGGCAAG	14	+	89792690-89792694:89792695-89792697:89795257-89795298	14q32.11a	Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1 (PSMC1), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 1429620] [evidence TAS]	P26S4; p56; MGC24583; S4; MGC8541	
Homo sapiens	RefSeq	NM_002802.2	ILMN_3756	PSMC1	NM_002802.2	NM_002802.2		5700	24430150	NM_002802.2	PSMC1	NP_002793.2	ILMN_1736353	0003060487	S	1502	GGAGTACGATGTGTAAGTGCCCATTGGGTGGCCTGTTGGTCACTGTGCAG	14	+	89808635-89808684	14q32.11a	Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 1 (PSMC1), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 1429620] [evidence TAS]	P26S4; p56; MGC24583; S4; MGC8541	MGC24583; P26S4; p56; S4; MGC8541
Homo sapiens	RefSeq	Hs.543802	ILMN_163047	LOC728145	XM_001128645.1	XM_001128645.1		728145	113416823	XM_001128645.1	LOC728145	XP_001128645.1	ILMN_1838301	0006110475	S	2495	ATTATTGGACCCTCGCCAGACCTACGGCATCAGACACTCTGGGGTAGGAC	5	-	170665989-170666038	5q35.1d	PREDICTED: Homo sapiens hypothetical protein LOC728145 (LOC728145), mRNA.					
Homo sapiens	RefSeq	XM_936050.1	ILMN_36911	LOC653867	XM_936050.1	XM_936050.1		653867	88986878	XM_936050.1	LOC653867	XP_941143.1	ILMN_1678633	0006650333	S	181	CACAATGGAACCAGGAAAAGCAGCCCTTGCCCCTTCAGTGTGTCAGCAGC					PREDICTED: Homo sapiens similar to Occludin (LOC653867), mRNA.					
Homo sapiens	RefSeq	XR_018189.2	ILMN_182162	LOC401717	XR_018189.2	XR_018189.2		401717	169205259	XR_018189.2	LOC401717		ILMN_3285095	0004760743	M	694	AAAACGGTATGGCAGTCACCTTTGCTCCGGTCAATGTCACAACTGAAGTC				12q12f	PREDICTED: Homo sapiens misc_RNA (LOC401717), miscRNA.					
Homo sapiens	RefSeq	NM_001008712.1	ILMN_13159	RBPMS	NM_001008712.1	NM_001008712.1		11030	57164972	NM_001008712.1	RBPMS	NP_001008712.1	ILMN_2323087	0000610392	A	1079	TGCACTTTACCCCAGTAGCCCTGAAGTGTGGGCCCCGTACCCTCTGTACC	8	+	30361653-30361702	8p12e	Homo sapiens RNA binding protein with multiple splicing (RBPMS), transcript variant 3, mRNA.		Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8855282] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8855282] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	HERMES	HERMES
Homo sapiens	RefSeq	XM_931816.1	ILMN_35215	LOC653145	XM_931816.1	XM_931816.1		653145	89031024	XM_931816.1	LOC653145	XP_936909.1	ILMN_1676804	0003850735	I	1	TCCTGGTGTGCCTCCTGCAGGTGTCACAGCCTAGGCTCTTGGGAGTGCCT	10	-	46585457-46585506	10q11.22b	PREDICTED: Homo sapiens similar to Annexin A8 (Annexin VIII) (Vascular anticoagulant-beta) (VAC-beta), transcript variant 9 (LOC653145), mRNA.					
Homo sapiens	RefSeq	NM_171825.1	ILMN_19541	CAMK2A	NM_171825.1	NM_171825.1		815	25952117	NM_171825.1	CAMK2A	NP_741960.1	ILMN_1666445	0004850170	A	4486	CAGGAAAGTGTTCTCCTGGGTTTGTGCCCACCATGGTGCGAATCCTGACC	5	-	149579515-149579564	5q33.1c	Homo sapiens calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha (CAMK2A), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; An enzyme complex which in eukaryotes is composed of four different chains: alpha, beta, gamma, and delta. The different isoforms assemble into homo- or heteromultimeric holoenzymes composed of 8 to 12 subunits. Catalyzes the phosphorylation of proteins to O-phosphoproteins [goid 5954] [pmid 11264466] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 17052756] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 17052756] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 17052756] [evidence IC ]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA0968; CAMKA	KIAA0968; CAMKA
Homo sapiens	RefSeq	XM_001714712.1	ILMN_342233	LOC100134267	XM_001714712.1	XM_001714712.1		100134267	169212033	XM_001714712.1	LOC100134267	XP_001714764.1	ILMN_3241433	0004540474	S	1	ATGACGTGGTGGCAACGGGCCTTCAGGCGGGCTGTGGCCAAGACCTCTGC					PREDICTED: Homo sapiens hypothetical protein LOC100134267 (LOC100134267), mRNA.					
Homo sapiens	RefSeq	NM_003216.2	ILMN_7440	TEF	NM_003216.2	NM_003216.2		7008	34486096	NM_003216.2	TEF	NP_003207.1	ILMN_1706511	0004040114	S	4100	GATGTGATAGAGTGTGTGGGGCTCTGTGTCCTTCCCTGGGAGCTGGCATT	22	+	40125012-40125061	22q13.2a	Homo sapiens thyrotrophic embryonic factor (TEF), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 7835883] [evidence TAS]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	Interacting selectively with double-stranded DNA [goid 3690] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7835883] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]		
Homo sapiens	RefSeq	XM_937794.1	ILMN_37553	LOC648710	XM_937794.1	XM_937794.1		648710	89057631	XM_937794.1	LOC648710	XP_942887.1	ILMN_1710698	0002690477	S	758	TGCTGTGACCTCACTCTCTTCTGCTGTCCTGGGACCTCGTGGGCCTCCTC					PREDICTED: Homo sapiens similar to leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 (LOC648710), mRNA.					
Homo sapiens	RefSeq	XM_938385.1	ILMN_42892	LOC649318	XM_938385.1	XM_938385.1		649318	89031786	XM_938385.1	LOC649318	XP_943478.1	ILMN_1779765	0000110670	S	517	TCTCTACCCCTTGCTCAACTCCACGCAGCCCATCCCCCTTCCCAGAACGT					PREDICTED: Homo sapiens hypothetical protein LOC649318 (LOC649318), mRNA.					
Homo sapiens	RefSeq	XM_001714166.1	ILMN_348129	LOC100131647	XM_001714166.1	XM_001714166.1		100131647	169216503	XM_001714166.1	LOC100131647	XP_001714218.1	ILMN_3290870	0001260259	M	415	CTGGACCAAAACAGTGAGGAGACCTCCACCTTCTTCAGTGTCTCCCTGAG					PREDICTED: Homo sapiens similar to hCG1653500 (LOC100131647), mRNA.					
Homo sapiens	RefSeq	NM_014597.3	ILMN_26105	DNTTIP2	NM_014597.3	NM_014597.3		30836	54633314	NM_014597.3	DNTTIP2	NP_055412.2	ILMN_1708345	0000150719	S	2222	CCGAAGGAAGTACTCAGAGATCATGGCTGAAAAAGCAGCAAATGCAGCAG	1	-	94335444-94335493	1p22.1a	Homo sapiens deoxynucleotidyltransferase, terminal, interacting protein 2 (DNTTIP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		TdIF2; LPTS-RP2; RP4-561L24.1; ERBP; HSU15552; MGC163494; FCF2	TdIF2; LPTS-RP2; RP4-561L24.1; ERBP; HSU15552; MGC163494; FCF2
Homo sapiens	RefSeq	XM_926109.1	ILMN_30645	LOC642646	XM_926109.1	XM_926109.1		642646	88983528	XM_926109.1	LOC642646	XP_931202.1	ILMN_1771735	0006420259	S	61	AGTGAACAGTTTTGCCTTAAGACACACATGAGAGCTCAGAATGGAGGGAA	5	+	54189002-54189051		PREDICTED: Homo sapiens similar to zinc finger protein 561 (LOC642646), mRNA.					
Homo sapiens	RefSeq	NM_001012413.1	ILMN_14464	SGOL1	NM_001012413.1	NM_001012413.1		151648	60302878	NM_001012413.1	SGOL1	NP_001012413.1	ILMN_2404906	0007150128	A	753	CCTAAACGTAGGTGCACAGCCAGCGTGAACTATAAGGAGCCCACCCTCGC	3	-	20212537-20212586	3p24.3b	Homo sapiens shugoshin-like 1 (S. pombe) (SGOL1), transcript variant C1, mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A cohesin complex that mediates sister chromatid cohesion during mitosis; has a subunit composition distinct from that of the meiotic cohesin complex [goid 30892] [pmid 18084284] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during the meiotic cell cycle [goid 45132] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16541025] [evidence IPI]	NY-BR-85; Sgo1	NY-BR-85; Sgo1
Homo sapiens	RefSeq	XM_001713741.1	ILMN_346604	LOC100133171	XM_001713741.1	XM_001713741.1		100133171	169216823	XM_001713741.1	LOC100133171	XP_001713793.1	ILMN_3244876	0002970647	S	240	AAAAAATGAAAACATCTGAGTCCTCGACCATACTAGTGGTTCGCTACAGG	X	+	139913308-139913357	Xq27.1d	PREDICTED: Homo sapiens hypothetical protein LOC100133171 (LOC100133171), mRNA.					
Homo sapiens	RefSeq	NM_002407.1	ILMN_29807	SCGB2A1	NM_002407.1	NM_002407.1		4246	4505170	NM_002407.1	SCGB2A1	NP_002398.1	ILMN_1732398	0006840154	S	358	CCCAAGGCGTTTGGCTCAGAGGGCTACAGACTATGGCCAGAACTCATCTG	11	+	61737824-61737873	11q12.3a	Homo sapiens secretoglobin, family 2A, member 1 (SCGB2A1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any androgen, male sex hormones [goid 5497] [evidence NAS]	UGB3; MGC71973; LPHC; MGB2	UGB3; MGC71973; LPHC; MGB2
Homo sapiens	RefSeq	NM_001012981.2	ILMN_11974	ZKSCAN2	NM_001012981.3	NM_001012981.3		342357	141803211	NM_001012981.3	ZKSCAN2	NP_001012999.2	ILMN_1771135	0007570397	S	6800	ACAGCAGGCACCCCCCAAGCACCTCGATAACCAGTGGCAGGTAGGCTGAA	16	-	25155086-25155135	16p12.1b	Homo sapiens zinc finger with KRAB and SCAN domains 2 (ZKSCAN2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF694; ZSCAN31; FLJ23199	ZNF694; ZSCAN31; FLJ23199
Homo sapiens	RefSeq	NM_003847.1	ILMN_20720	PEX11A	NM_003847.1	NM_003847.1		8800	4505716	NM_003847.1	PEX11A	NP_003838.1	ILMN_1690695	0006280685	S	962	CAACCTGTGATGTGGGCAGAGATGAGGCCAAGAACGGAGAAGGGAGGAGC	15	-	90226435-90226484	15q26.1b	Homo sapiens peroxisomal biogenesis factor 11 alpha (PEX11A), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 9922452] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 9714566] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9792670] [evidence IMP]; The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [evidence IEA]		MGC138534; PEX11-ALPHA; MGC119947	MGC138534; PEX11-ALPHA; MGC119947
Homo sapiens	RefSeq	NM_000642.1	ILMN_11688	AGL	NM_000642.2	NM_000642.2		178	116734859	NM_000642.2	AGL	NP_000633.2	ILMN_1680343	0001440661	I	169	CTTTGCCCTTCACGGCGCCCGGCCCTCCTTGGGCTGCGGCTTCTGTGCGA	1	+	100088396-100088445	1p21.2a	Homo sapiens amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (AGL), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9691087] [evidence EXP]; A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages [goid 43033] [pmid 1374391] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [pmid 9691087] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GDE	GDE
Homo sapiens	RefSeq	NM_000645.1	ILMN_11688	AGL	NM_000642.2	NM_000642.2		178	116734859	NM_000642.2	AGL	NP_000633.2	ILMN_1664006	0007000672	A	6603	CCCTTCTCTAAACTGTGCGGGTAAAAGGAATGACTGTCCTTGAGAGAACC	1	+	100161399-100161448	1p21.2a	Homo sapiens amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (AGL), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9691087] [evidence EXP]; A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages [goid 43033] [pmid 1374391] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [pmid 9691087] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GDE	GDE
Homo sapiens	RefSeq	NM_001348.1	ILMN_28768	DAPK3	NM_001348.1	NM_001348.1		1613	4557510	NM_001348.1	DAPK3	NP_001339.1	ILMN_1792710	0000840682	S	1788	CTGGTTCAGGCCCGGAGGAGGGTTTGCGGGTAGTTGCACGGACAATTCGG	19	-	3958719-3958768	19p13.3e	Homo sapiens death-associated protein kinase 3 (DAPK3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10356987] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12917339] [evidence IMP]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10356987] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10356987] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12917339] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10356987] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ36473; ZIPK; ZIP	FLJ36473; ZIPK; ZIP
Homo sapiens	RefSeq	NR_015407.1	ILMN_370793	LOC339535	NR_015407.1	NR_015407.1		339535	213511902	NR_015407.1	LOC339535		ILMN_3240843	0004730451	S	1105	CGCTCTGGCCGTATGTAATGATGTCTGTGGCTACATAACCTGCCAACACT	1	-	238644060-238644109		Homo sapiens hypothetical LOC339535 (LOC339535), non-coding RNA.					
Homo sapiens	RefSeq	XM_001716832.1	ILMN_344459	LOC100130071	XM_001716832.1	XM_001716832.1		100130071	169161210	XM_001716832.1	LOC100130071	XP_001716884.1	ILMN_3187429	0000520475	A	416	AGGACCTGGTGGGGTTGGTACTGGGTTCTGCTGGCTTTGGAGTGGCTGTG	1	+	6249517-6249566	1p36.31a	PREDICTED: Homo sapiens similar to GSQS6193 (LOC100130071), mRNA.					
Homo sapiens	RefSeq	NM_001008745.1	ILMN_18364	LOC401431	NM_001008745.1	NM_001008745.1		401431	56847621	NM_001008745.1	LOC401431	NP_001008745.1	ILMN_2067682	0005080010	S	2694	TCTGGCTGTATCCCGAGTCTCTGAAACCTTTGCTCCAGTCCCGTGGGAGC	7	-	149195971-149196020	7q36.1b	Homo sapiens hypothetical gene LOC401431 (LOC401431), mRNA.					
Homo sapiens	RefSeq	NM_013939.1	ILMN_19047	OR10H2	NM_013939.1	NM_013939.1		26538	7330336	NM_013939.1	OR10H2	NP_039227.1	ILMN_1670144	0001030577	S	771	TGTCATCTACCTCAAGCCCAAAGGTCCCCACTCTCAGGAGGGTGACACCC	19	+	15700624-15700673	19p13.12a	Homo sapiens olfactory receptor, family 10, subfamily H, member 2 (OR10H2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	MGC138383	MGC138383
Homo sapiens	RefSeq	NM_144679.1	ILMN_17281	C17ORF56	NM_144679.1	NM_144679.1		146705	21389576	NM_144679.1	C17orf56	NP_653280.1	ILMN_2056687	0004230356	S	1922	TTTGATCTCAGCTCCCTCCTTCCCCAGGAGGTCATGAGCAGCAACAAGCC	17	-	79202356-79202405	17q25.3f	Homo sapiens chromosome 17 open reading frame 56 (C17orf56), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ31528	FLJ31528
Homo sapiens	RefSeq	NM_002719.2	ILMN_162908	PPP2R5C	NM_002719.2	NM_002719.2		5527	31083258	NM_002719.2	PPP2R5C	NP_002710.2	ILMN_1780913	0001170626	I	1447	AGTCAAGCCAGCACCATGAGCATTCCGGTTGCAATGGAGACAGATGGGCC	14	+	101453933-101453982	14q32.31b	Homo sapiens protein phosphatase 2, regulatory subunit B', gamma isoform (PPP2R5C), transcript variant 1, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12297508] [evidence IDA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 8703017] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8703017] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [pmid 12297508] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8703017] [evidence NAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 12297508] [evidence IDA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17540176] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15380617] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8617797] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 8703017] [evidence NAS]	PR61G; MGC23064; B56G	MGC23064; B56G
Homo sapiens	RefSeq	NM_016179.1	ILMN_17476	TRPC4	NM_016179.1	NM_016179.1		7223	7706746	NM_016179.1	TRPC4	NP_057263.1	ILMN_1782295	0000010367	S	2988	GGGGTTACAGGTAGGAAAGAGAGTGTGTCCATTCAAGTCAGAGAAGGTGG	13	-	37109167-37109216	13q13.3c	Homo sapiens transient receptor potential cation channel, subfamily C, member 4 (TRPC4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16254212] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [pmid 16254212] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 8646775] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16254212] [evidence IPI];  [goid 15279] [pmid 16254212] [evidence IMP]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC119571; MGC119573; HTRP4; MGC119570; MGC119572; TRP4	MGC119571; MGC119573; HTRP4; MGC119570; MGC119572; TRP4
Homo sapiens	RefSeq	XM_941085.1	ILMN_137870	CCDC4	XM_941085.1	XM_941085.1		389206	88979724	XM_941085.1	CCDC4	XP_946178.1	ILMN_1793309	0006650397	I	1107	CCCCGATTGGTGGATGCCCTCGGAAGAGCAGATAAACAAAGTGTTCAGCG				4p13d	PREDICTED: Homo sapiens coiled-coil domain containing 4 (CCDC4), mRNA.					
Homo sapiens	RefSeq	XR_000530.1	ILMN_163227	C12ORF37	XM_001134418.1	XM_001134418.1		439916	113423433	XM_001134418.1	C12orf37	XP_001134418.1	ILMN_1757142	0004220014	A	915	GGGATTTAAGTATCTCCTCTCTAGGTGCCTACCCTCCTTGGACTCAGGTC	12	+	89866114-89866163	12q21.33c	PREDICTED: Homo sapiens chromosome 12 open reading frame 37 (C12orf37), mRNA.					
Homo sapiens	RefSeq	XM_929851.1	ILMN_137721	LOC646888	XM_929851.1	XM_929851.1		646888	88992684	XM_929851.1	LOC646888	XP_934944.1	ILMN_1758680	0001110097	S	1340	GTCACTGGAGCAGCCCCGCTCTCTCGGAGTGACCGTTTCCTGAACGCAAT	6	+	37612179-37612228	6p21.2c	PREDICTED: Homo sapiens hypothetical protein LOC646888 (LOC646888), mRNA.					
Homo sapiens	RefSeq	NM_003246.2	ILMN_182705	THBS1	NM_003246.2	NM_003246.2		7057	40317625	NM_003246.2	THBS1	NP_003237.2	ILMN_1686116	0005810685	S	4947	CAGTCTAATAAGCTGCTCTGCCCCTTGTGCTCAGAGTGGATGTTATGGGA	15	+	37676117-37676166	15q14d	Homo sapiens thrombospondin 1 (THBS1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 6338048] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 6338048] [evidence EXP]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9304800] [evidence TAS]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [pmid 8751720] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8751720] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	TSP; THBS; TSP1	TSP; THBS; TSP1
Homo sapiens	RefSeq	NM_080868.1	ILMN_21270	ASB17	NM_080868.1	NM_080868.1		127247	27477048	NM_080868.1	ASB17	NP_543144.1	ILMN_1670829	0001580523	S	229	CCTCCCTACAGTTTTTGGGTCAGTGGGGATATCACTGTTACGAACCAAGG	1	-	76170426-76170475	1p31.1g	Homo sapiens ankyrin repeat and SOCS box-containing 17 (ASB17), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		Asb-17	Asb-17
Homo sapiens	RefSeq	NM_080868.1	ILMN_21270	ASB17	NM_080868.1	NM_080868.1		127247	27477048	NM_080868.1	ASB17	NP_543144.1	ILMN_2210101	0000270189	S	712	GAGTAAGAGTAATGGTTGATCGTGAATTGGCTGACATCCATGAAGATGCC	1	-	76160412-76160461	1p31.1g	Homo sapiens ankyrin repeat and SOCS box-containing 17 (ASB17), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		Asb-17	Asb-17
Homo sapiens	RefSeq	NM_007188.2	ILMN_16943	ABCB8	NM_007188.2	NM_007188.2		11194	9955964	NM_007188.2	ABCB8	NP_009119.1	ILMN_2102422	0003990592	S	1752	AGAGGTGTACACAGCCGCCCGGGAAGCGAATGCTCACGAGTTCATCACCA	7	+	150370049-150370098	7q36.1d	Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 8 (ABCB8), nuclear gene encoding mitochondrial protein, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9878413] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [pmid 9878413] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter [goid 43190] [pmid 9878413] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9878413] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9878413] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9878413] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	MABC1; EST328128; M-ABC1	MABC1; EST328128; M-ABC1
Homo sapiens	RefSeq	NM_015909.2	ILMN_29391	NBAS	NM_015909.2	NM_015909.2		51594	41393546	NM_015909.2	NBAS	NP_056993.2	ILMN_1686392	0002030474	S	7061	TCTCCTTCTGGCCGTGAGGGGGACTCACCAGGCCTTCAGAACCTTCAGTA	2	-	15473178-15473227	2p24.3b	Homo sapiens neuroblastoma amplified sequence (NBAS), mRNA.				DKFZP586G1219; FLJ40407	DKFZP586G1219; FLJ40407
Homo sapiens	RefSeq	NM_148898.1	ILMN_424	FOXP2	NM_148898.2	NM_148898.2		93986	149999351	NM_148898.2	FOXP2	NP_683696.2	ILMN_1695355	0000990301	A	2432	CTGCTCACCTCAGCCGCACATACATTCAATCCACGTCAAGGAAGAGCCAG	7	+	114085531-114085558:114086647-114086668	7q31.1d	Homo sapiens forkhead box P2 (FOXP2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of the caudate nucleus over time from its initial formation until its mature state. The caudate nucleus is the C-shaped structures of the striatum containing input neurons involved with control of voluntary movement in the brain [goid 21757] [pmid 11872605] [evidence IMP]; The progression of the putamen over time from its initial formation until its mature state. The putamen is the lens-shaped basal ganglion involved with control of voluntary movement in the brain [goid 21758] [pmid 11872605] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16407075] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	TNRC10; SPCH1; DKFZp686H1726; CAGH44	TNRC10; SPCH1; DKFZp686H1726; CAGH44
Homo sapiens	RefSeq	XM_001725915.1	ILMN_339631	FLJ10088	XM_001725915.1	XM_001725915.1		389419	169168773	XM_001725915.1	FLJ10088	XP_001725967.2	ILMN_3182000	0003390037	A	1353	TCCTGGAAGAAAACCTAGGCAATACCATTCAGGACATAGGGATGGGCAAA				6q16.3e	PREDICTED: Homo sapiens similar to hypothetical protein (L1H 3 region) (FLJ10088), mRNA.					
Homo sapiens	RefSeq	XM_934970.1	ILMN_46739	MLLT4	NM_001040001.1	NM_001040001.1		4301	90819236	NM_001040001.1	MLLT4	NP_001035090.1	ILMN_1651310	0000270021	I	7368	AATATATAGAAAAATACACAGGAGAACATGCAGATACATGTAAATATCTA	6	+	168115185-168115234	6q27d	Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 (MLLT4), transcript variant 1, mRNA.	A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 10856295] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10856295] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8242616] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8242616] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10856295] [evidence TAS]	AF-6; RP3-431P23.3; FLJ34371; AFADIN; AF6	
Homo sapiens	RefSeq	NM_001040084.1	ILMN_162852	ANXA8	NM_001040084.1	NM_001040084.1		653145	91823261	NM_001040084.1	ANXA8	NP_001035173.1	ILMN_2095610	0002490682	S	468	GGCCCTTATGTACCCGCCATACAGATACGAAGCCAAGGAGCTGCATGACG	10	+	47882230-47882279	10q11.22b	Homo sapiens annexin A8 (ANXA8), mRNA. XM_931361 XM_931369 XM_931374 XM_931375 XM_931378 XM_931383 XM_931388 XM_931391 XM_931399 XM_931404 XM_931411		The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	bA301J7.3; ANX8	bA301J7.3; ANX8
Homo sapiens	RefSeq	NM_001252.2	ILMN_19983	CD70	NM_001252.3	NM_001252.3		970	117190500	NM_001252.3	CD70	NP_001243.1	ILMN_1760247	0004220068	S	638	GAGGGGACACACTCTGCACCAACCTCACTGGGACACTTTTGCCTTCCCGA	19	-	6586075-6586124	19p13.3a	Homo sapiens CD70 molecule (CD70), mRNA.	Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [pmid 11920585] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11920585] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8120384] [evidence TAS]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9177220] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8387892] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8387892] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8120384] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	CD27L; TNFSF7; CD27LG	CD27L; CD70; CD27LG
Homo sapiens	RefSeq	NM_005949.1	ILMN_21370	MT1F	NM_005949.2	NM_005949.2		4494	141803125	NM_005949.2	MT1F	NP_005940.1	ILMN_1718766	0004220672	S	290	CTGCTGCGACTGATGCCAGGACAACCTTTCTCCCAGATGTAAACAGAGAG	16	+	55250565-55250577:55250578-55250614	16q13b	Homo sapiens metallothionein 1F (MT1F), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Interacting selectively with cadmium (Cd) ions [goid 46870] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MT1; MGC32732	MT1; MGC32732
Homo sapiens	RefSeq	XM_929368.1	ILMN_45728	LOC646442	XM_929368.1	XM_929368.1		646442	89044998	XM_929368.1	LOC646442	XP_934461.1	ILMN_1681003	0004150324	S	30	GAAGACAGCATTTCCTTGCTCTGAATCCCAGGGCCCCACAGAGGAGCTGA	18	-	14620692-14620741	18p11.21b	PREDICTED: Homo sapiens similar to Sorting nexin-19 (LOC646442), mRNA.					
Homo sapiens	RefSeq	XM_932427.1	ILMN_30695	LOC644827	XM_943366.1	XM_943366.1		644827	88945295	XM_943366.1	LOC644827	XP_948459.1	ILMN_1705581	0003870524	S	2	TGCGGACAGATGCGGACGTTCTGCCGCCGCCTGCAGGCAGAGGGACTCGG				1p36.23b	PREDICTED: Homo sapiens hypothetical LOC644827 (LOC644827), mRNA.					
Homo sapiens	RefSeq	NM_178824.3	ILMN_178619	WDR49	NM_178824.3	NM_178824.3		151790	34222272	NM_178824.3	WDR49	NP_849146.1	ILMN_2198867	0003780333	S	2225	GGAAAGAACCAGAGGAAGAGCGTCCCCAAATTCTGGAGGCCCCGTCACTT	3	-	168700641-168700690	3q26.1f	Homo sapiens WD repeat domain 49 (WDR49), mRNA.				FLJ33620	FLJ33620
Homo sapiens	RefSeq	NM_178824.3	ILMN_178619	WDR49	NM_178824.3	NM_178824.3		151790	34222272	NM_178824.3	WDR49	NP_849146.1	ILMN_1757180	0001820255	S	2161	GCCCTGGAAGAGCTGCCTGAAGTGAATAAACCTGCTTTCCTTCTAGACCC	3	-	168700705-168700754	3q26.1f	Homo sapiens WD repeat domain 49 (WDR49), mRNA.				FLJ33620	FLJ33620
Homo sapiens	RefSeq	NM_005759.3	ILMN_162431	ABI2	XM_001126750.1	XM_001126750.1		10152	113414210	XM_001126750.1	ABI2	XP_001126750.1	ILMN_1720988	0005820379	I	69	GTCAGCAGATAAGCAGAGAGCCCTAGAAGAAACCAAAGCCTACACCACCC				2q33.2a	PREDICTED: Homo sapiens abl interactor 2 (ABI2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 96067151] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8649853] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17101133] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 11516653] [evidence NAS]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [pmid 11516653] [evidence NAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 11516653] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 12011975] [evidence TAS]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 11516653] [evidence NAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 12011975] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [pmid 17101133] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7590236] [evidence TAS]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 7590236] [evidence TAS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 12011975] [evidence TAS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 8649853] [evidence TAS]; Interacting selectively with a kinase, any enzyme that catalyzes the transfer of a phosphate group [goid 19900] [pmid 8649853] [evidence NAS]		AIP-1; SSH3BP2; argBPIB; ABI2B; ABI-2; AblBP3; argBPIA
Homo sapiens	RefSeq	NM_005759.3	ILMN_162431	ABI2	XM_001126750.1	XM_001126750.1		10152	113414210	XM_001126750.1	ABI2	XP_001126750.1	ILMN_1724497	0002000100	A	1410	TGGTTGGTATGAGGGAGTTATGAATGGAGTGACTGGGCTTTTTCCTGGGA				2q33.2a	PREDICTED: Homo sapiens abl interactor 2 (ABI2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 96067151] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8649853] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17101133] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 11516653] [evidence NAS]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [pmid 11516653] [evidence NAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 11516653] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 12011975] [evidence TAS]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 11516653] [evidence NAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 12011975] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [pmid 17101133] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7590236] [evidence TAS]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 7590236] [evidence TAS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 12011975] [evidence TAS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 8649853] [evidence TAS]; Interacting selectively with a kinase, any enzyme that catalyzes the transfer of a phosphate group [goid 19900] [pmid 8649853] [evidence NAS]		AIP-1; SSH3BP2; argBPIB; ABI2B; ABI-2; AblBP3; argBPIA
Homo sapiens	RefSeq	XM_938458.1	ILMN_162431	ABI2	XM_001126750.1	XM_001126750.1		10152	113414210	XM_001126750.1	ABI2	XP_001126750.1	ILMN_1775944	0000670326	A	698	GGAGCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTGGAAGTGGT				2q33.2a	PREDICTED: Homo sapiens abl interactor 2 (ABI2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 96067151] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8649853] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17101133] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 11516653] [evidence NAS]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [pmid 11516653] [evidence NAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 11516653] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 12011975] [evidence TAS]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 11516653] [evidence NAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 12011975] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [pmid 17101133] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7590236] [evidence TAS]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 7590236] [evidence TAS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 12011975] [evidence TAS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 8649853] [evidence TAS]; Interacting selectively with a kinase, any enzyme that catalyzes the transfer of a phosphate group [goid 19900] [pmid 8649853] [evidence NAS]		
Homo sapiens	RefSeq	XM_929478.1	ILMN_43501	LOC392440	XM_929478.1	XM_929478.1		392440	89059507	XM_929478.1	LOC392440	XP_934571.1	ILMN_1662627	0002810341	S	365	TGGAGTACTGCCAGGTGCCCAACAGTGATCCTCCATGCTATGAATTCCTG	X	+	34987745-34987794	Xp21.1c	PREDICTED: Homo sapiens similar to melanoma antigen family A, 10 (LOC392440), mRNA.					
Homo sapiens	RefSeq	XM_936263.1	ILMN_35643	LOC642119	XM_936263.1	XM_936263.1		642119	88999181	XM_936263.1	LOC642119	XP_941356.1	ILMN_1770596	0002850181	S	42	GGAGTGTGCAAGCCATGAGCATTTGTGGCATCCATGTGGTGTTAAGTCTG					PREDICTED: Homo sapiens hypothetical protein LOC642119 (LOC642119), mRNA.					
Homo sapiens	RefSeq	XM_932554.1	ILMN_31406	LOC644981	XM_932554.1	XM_932554.1		644981	89060252	XM_932554.1	LOC644981	XP_937647.1	ILMN_1670674	0000990397	S	121	CGGACTGAGATTCCACTGCTCGGTGCGAGCAGTTGCCAACAGGGGAGTCC	X	-	138115220-138115269		PREDICTED: Homo sapiens hypothetical protein LOC644981 (LOC644981), mRNA.					
Homo sapiens	RefSeq	XM_001723290.1	ILMN_351725	LOC100130698	XM_001723290.1	XM_001723290.1		100130698	169198901	XM_001723290.1	LOC100130698	XP_001723342.1	ILMN_3272434	0000630746	M	350	CTGGGACCTCATCAACATGCTACATGTGTCTGTCTTCCGGGACCTCATCC				10q23.1a	PREDICTED: Homo sapiens hypothetical protein LOC100130698 (LOC100130698), mRNA.					
Homo sapiens	RefSeq	XM_936770.1	ILMN_46305	LOC647710	XM_936770.1	XM_936770.1		647710	88944470	XM_936770.1	LOC647710	XP_941863.1	ILMN_1811960	0001340474	S	131	GTGACATCCAGGTGTGGCTGCTGACACGGAGCACAGGACACCCTGCTCCT					PREDICTED: Homo sapiens hypothetical protein LOC647710 (LOC647710), mRNA.					
Homo sapiens	RefSeq	NM_145035.2	ILMN_173408	C3ORF57	NM_001040100.1	NM_001040100.1		165679	93141041	NM_001040100.1	C3orf57	NP_001035189.1	ILMN_1658649	0004560600	S	1890	CTCAACAGCTCCAGTTAAATGCTTTGATATAGTGGCTCCTTTGCAGAGCC	3	-	162545640-162545689	3q26.1b	Homo sapiens chromosome 3 open reading frame 57 (C3orf57), mRNA.				ADMP; MGC104229	ADMP; MGC104229
Homo sapiens	RefSeq	XM_930108.1	ILMN_173408	C3ORF57	NM_001040100.1	NM_001040100.1		165679	93141041	NM_001040100.1	C3orf57	NP_001035189.1	ILMN_1757639	0000110630	S	775	ATGGATTTGAGGCGTGTGAAGGAATATTTCTCCTGGCTCTACTATCAATA	3	-	162546755-162546804	3q26.1b	Homo sapiens chromosome 3 open reading frame 57 (C3orf57), mRNA.				ADMP; MGC104229	
Homo sapiens	RefSeq	XM_926107.1	ILMN_44205	LOC642639	XM_926107.1	XM_926107.1		642639	89029277	XM_926107.1	LOC642639	XP_931200.1	ILMN_1767810	0000060576	S	213	CCGTTCCTCCCTCTGCGCCTCTGCTGTAGGTAGTAAAGGCTTTCTGCTAG	9	-	41427133-41427182		PREDICTED: Homo sapiens similar to Contactin-associated protein-like 3 precursor (Cell recognition molecule Caspr3) (LOC642639), mRNA.					
Homo sapiens	RefSeq	NM_025213.2	ILMN_11937	SPTBN4	NM_025213.2	NM_025213.2		57731	115430238	NM_025213.2	SPTBN4	NP_079489.2	ILMN_2406439	0001190164	A	1922	GGTTGGAAAGAGCTGCTGTCAGCCTGTGAGGATGCCCGCCTGCATGTCAG	19	+	41066161-41066210	19q13.2b	Homo sapiens spectrin, beta, non-erythrocytic 4 (SPTBN4), transcript variant sigma5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11294830] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [pmid 11086001] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11294830] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 11294830] [evidence IDA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 11086001] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 11294830] [evidence TAS]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11086001] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 11294830] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12812986] [evidence IPI]; Interacting selectively with ankyrin, a 200 kDa cytoskeletal protein that attaches other cytoskeletal proteins to integral membrane proteins [goid 30506] [pmid 11294830] [evidence IDA]	KIAA1642; SPNB4; QV; SPTBN3	KIAA1642; QV; SPTBN3
Homo sapiens	RefSeq	NM_001024938.1	ILMN_22044	SLC2A11	NM_001024938.1	NM_001024938.1		66035	68226419	NM_001024938.1	SLC2A11	NP_001020109.1	ILMN_1748090	0003830601	A	1397	TGTCCCACTTCCTCTATGTCCCTTTCCTTGGTGTCTGTGTCTGTGGGGCC	22	+	22556843-22556892	22q11.23a	Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 11 (SLC2A11), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	MGC118833; MGC118830; GLUT10; SLC2A11-a; SLC2A11-c; GLUT11	GLUT10; SLC2A11-a; SLC2A11-c; MGC118833; MGC118830; GLUT11
Homo sapiens	Unigene	Hs.581740	ILMN_133921	HS.581740	Hs.581740		Hs.581740		19686896	AL703541			ILMN_1910165	0003450021	S	238	TGTGTTGGCCTGGAGCCAAGGGGAGTACATAGTGGCAGATCCTGAGAGGG	4	+	150171831-150171880		DKFZp686M2322_s1 686 (synonym: hlcc3) Homo sapiens cDNA clone DKFZp686M2322 3, mRNA sequence					
Homo sapiens	Unigene	Hs.550193	ILMN_110215	HS.550193	Hs.550193		Hs.550193		1171236	U43604			ILMN_1827211	0003890414	S	1382	TCCCAGTTCACAGGTGGGAAGTTATGGGAATGAAGAAAATGTGGGGGAGG	5	-	59313953-59314002		Human unidentified mRNA, partial sequence					
Homo sapiens	RefSeq	NM_182530.1	ILMN_182184	C12ORF28	NM_182530.1	NM_182530.1		196446	32698897	NM_182530.1	C12orf28	NP_872336.1	ILMN_1787199	0006590433	S	901	GAGCCTCCCTGTAGCCCCATTTTCTGACAGCATGTTCCATTTCCGTGTAG	12	+	68638313-68638362	12q15c	Homo sapiens chromosome 12 open reading frame 28 (C12orf28), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC126869; FLJ25056	FLJ25056; MGC126869
Homo sapiens	RefSeq	NM_024633.2	ILMN_165550	C14ORF139	XR_017875.1	XR_017875.1		79686	113424505	XR_017875.1	C14orf139		ILMN_1684357	0005220333	S	2589	CAAGTCCAAAGCTAATGGAGCCTTCCCCGCCATCCAGGGAGGAACACCAG	14	-	94943542-94943591	14q32.13b	PREDICTED: Homo sapiens chromosome 14 open reading frame 139 (C14orf139), misc RNA.					FLJ21276
Homo sapiens	Unigene	Hs.573492	ILMN_125673	HS.573492	Hs.573492		Hs.573492		3039631	AA904508			ILMN_1884758	0002600400	S	399	CCAGTTTTTGCCTGTTAGGAATAATGCTGCTTTGAACATTGGTATGCAAG					ol26b07.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1524565 3 similar to contains L1.t1 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_000830.3	ILMN_12366	GRIK1	NM_175611.2	NM_175611.2		2897	59710095	NM_175611.2	GRIK1	NP_783300.1	ILMN_1773114	0001260370	A	2837	GCATATGATGAAAGAGAAGTGGTGGCGTGGGAATGGCTGCCCCGAGGAAG	21	-	30927512-30927561	21q21.3c	Homo sapiens glutamate receptor, ionotropic, kainate 1 (GRIK1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8260617] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 8260617] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 10580501] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 10580501] [evidence TAS]; Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51966] [pmid 9335499] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IEA];  [goid 15277] [evidence IEA];  [goid 15277] [pmid 9335499] [evidence IDA]	GLUR5; EEA3; EAA3; GLR5	GLUR5; EEA3; GLR5; EAA3
Homo sapiens	RefSeq	NM_175611.2	ILMN_12366	GRIK1	NM_175611.2	NM_175611.2		2897	59710095	NM_175611.2	GRIK1	NP_783300.1	ILMN_1682583	0006280682	I	3146	TCAGAGACGAACTCAGAGAAAAGAGACTGTGGCGTGATCCAAGGAAACGC	21	-	30909537-30909550:30909551-30909586	21q21.3c	Homo sapiens glutamate receptor, ionotropic, kainate 1 (GRIK1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8260617] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 8260617] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 10580501] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 10580501] [evidence TAS]; Any process that modulates the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51966] [pmid 9335499] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [evidence IEA];  [goid 15277] [evidence IEA];  [goid 15277] [pmid 9335499] [evidence IDA]	GLUR5; EEA3; EAA3; GLR5	GLUR5; EEA3; GLR5; EAA3
Homo sapiens	RefSeq	NM_017411.2	ILMN_18160	SMN1	NM_000344.2	NM_000344.2		6606	13259515	NM_000344.2	SMN1	NP_000335.1	ILMN_1665022	0007510037	A	1	CCACAAATGTGGGAGGGCGATAACCACTCGTAGAAAGCGTGAGAAGTTAC	5	+	70256524-70256573	5q13.2b	Homo sapiens survival of motor neuron 1, telomeric (SMN1), transcript variant d, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9845364] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [pmid 9845364] [evidence NAS]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [pmid 8670859] [evidence NAS]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9845364] [evidence NAS]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9323129] [evidence NAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8670859] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17023415] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]	SMNT; SMA2; SMN; SMA3; SMA@; SMA; BCD541; T-BCD541; SMA4; SMA1	SMNC; C-BCD541; BCD541
Homo sapiens	RefSeq	XM_936952.1	ILMN_18160	SMN1	NM_000344.2	NM_000344.2		6606	13259515	NM_000344.2	SMN1	NP_000335.1	ILMN_1675609	0002690703	A	428	TTACAACAGTGGAAAGTTGGGGACAAATGTTCTGCCATTTGGTCAGAAGA	5	+	70273083-70273091:70273941-70273981	5q13.2b	Homo sapiens survival of motor neuron 1, telomeric (SMN1), transcript variant d, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9845364] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [pmid 9845364] [evidence NAS]; A class of nuclear body, first seen after silver staining by Cajal in 1903, enriched in small nuclear ribonucleoproteins, and certain general RNA polymerase II transcription factors; ultrastructurally, they appear as a tangle of coiled, electron-dense threads roughly 0.5 micrometers in diameter; involved in aspects of snRNP biogenesis; the protein coilin serves as a marker for Cajal bodies. Some argue that Cajal bodies are the sites for preassembly of transcriptosomes, unitary particles involved in transcription and processing of RNA [goid 15030] [pmid 8670859] [evidence NAS]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9845364] [evidence NAS]; The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9323129] [evidence NAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8670859] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17023415] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]	SMNT; SMA2; SMN; SMA3; SMA@; SMA; BCD541; T-BCD541; SMA4; SMA1	
Homo sapiens	Unigene	Hs.106234	ILMN_74965	HS.106234	Hs.106234		Hs.106234		21753566	AK094492			ILMN_1839647	0005340762	S	1727	CAAGGAGTGAATGGGTAGTGTTTTTGTTTTTGTGAGAGGGGTGGCGGAGG	21	-	41435537-41435586		Homo sapiens cDNA FLJ37173 fis, clone BRACE2028392					
Homo sapiens	RefSeq	NM_001129820.1	ILMN_365504	SLFN14	NM_001129820.1	NM_001129820.1		342618	193788704	NM_001129820.1	SLFN14	NP_001123292.1	ILMN_3243634	0006380152	S	2485	GCAGGAGAGGGGAGGACAGAGGACGCTATAGGCTTGCACTACTCAAAGCA	17	-	33875491-33875540	17q12a	Homo sapiens schlafen family member 14 (SLFN14), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_032308.1	ILMN_15409	RPAIN	NM_032308.1	NM_032308.1		84268	14149614	NM_032308.1	RPAIN	NP_115684.1	ILMN_2323774	0000770164	A	577	CTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGACTCAC	17	+	5272253-5272255:5276586-5276632	17p13.2b	Homo sapiens RPA interacting protein (RPAIN), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16135809] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 16135809] [evidence IDA]	The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 16135809] [evidence IPI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 16135809] [evidence IPI]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 16135809] [evidence IPI]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [pmid 16135809] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 16135809] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 16135809] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC4189; RIP; HRIP	MGC4189; RIP; HRIP
Homo sapiens	RefSeq	NM_020212.1	ILMN_18593	WDR93	NM_020212.1	NM_020212.1		56964	40556360	NM_020212.1	WDR93	NP_064597.1	ILMN_1733254	0004860044	S	2213	GCTGCTCCCAGGACACTGAGGCCAAGAGAAATGTAACAGAGCCACAGCTC	15	+	88087677-88087726	15q26.1b	Homo sapiens WD repeat domain 93 (WDR93), mRNA.					
Homo sapiens	RefSeq	NM_198501.1	ILMN_24119	SMTNL2	NM_198501.1	NM_198501.1		342527	38348315	NM_198501.1	SMTNL2	NP_940903.1	ILMN_1740728	0005360242	S	1539	CTGGGCCACTGCCAGGAAACAGAGAGACCGCTTAATCAGCAGCTTGACAA	17	+	4457983-4458032	17p13.2c	Homo sapiens smoothelin-like 2 (SMTNL2), mRNA.				MGC131847; MGC138382; FLJ42461	MGC131847; MGC138382; FLJ42461
Homo sapiens	RefSeq	NM_024882.1	ILMN_21202	C6ORF155	NM_024882.1	NM_024882.1		79940	13376326	NM_024882.1	C6orf155	NP_079158.1	ILMN_1666617	0000020121	S	2587	CTAAGACGGATACCCCTGAATTAAGAGGTGCTGTTATACATTGACCAGGC	6	-	72181166-72181215	6q13b	Homo sapiens chromosome 6 open reading frame 155 (C6orf155), mRNA.				FLJ13189; dJ288M22.3	FLJ13189; dJ288M22.3
Homo sapiens	RefSeq	NM_003966.1	ILMN_183828	SEMA5A	NM_003966.1	NM_003966.1		9037	4506880	NM_003966.1	SEMA5A	NP_003957.1	ILMN_1656927	0003390575	S	7681	GTGGGAGTCAAAGCCTATTTTGCTGAGTGTTCCCACTGGATCCTCTGTAG	5	-	9092140-9092189	5p15.2d	Homo sapiens sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A (SEMA5A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9049630] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9464278] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9464278] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 8046] [evidence IEA]	semF; SEMAF	semF; SEMAF
Homo sapiens	RefSeq	XM_942894.1	ILMN_137143	NTAN1	XM_942894.1	XM_942894.1		123803	89040677	XM_942894.1	NTAN1	XP_947987.1	ILMN_1765499	0006420093	I	617	CACACACTGCTGTCACTGCTTGGCCACCATCTGTTCCGGCTCTTCCTGTG				16p13.11b	PREDICTED: Homo sapiens N-terminal asparagine amidase, transcript variant 3 (NTAN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IEA]	 [goid 8418] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_207345.1	ILMN_8446	CLEC9A	NM_207345.2	NM_207345.2		283420	141803213	NM_207345.2	CLEC9A	NP_997228.1	ILMN_1673238	0003390201	S	1119	GAAGCTATGATTACTGGGTGGGGTTGTCTCAGGATGGACACAGCGGACGC	12	+	10108632-10108681	12p13.2c	Homo sapiens C-type lectin domain family 9, member A (CLEC9A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	UNQ9341	UNQ9341
Homo sapiens	RefSeq	XR_079546.1	ILMN_379410	MGC11082	XR_079546.1	XR_079546.1		84777	239751497	XR_079546.1	MGC11082		ILMN_3307982	0002710494	A	1463	GGACTATGCTTAACCCATTCCCAGCTTATAAAAGCCCCATGGCAGCTGCA					PREDICTED: Homo sapiens hypothetical LOC84777 (MGC11082), miscRNA.					
Homo sapiens	RefSeq	XR_079546.1	ILMN_379410	MGC11082	XR_079546.1	XR_079546.1		84777	239751497	XR_079546.1	MGC11082		ILMN_3311145	0003120484	I	398	TAAAGGGTTGGGAAATGGATCAAGGGGAGGGAAGCGTTTTGATGGTCCCT					PREDICTED: Homo sapiens hypothetical LOC84777 (MGC11082), miscRNA.					
Homo sapiens	RefSeq	XM_001716711.1	ILMN_340333	LOC100128074	XM_001716711.1	XM_001716711.1		100128074	169203537	XM_001716711.1	LOC100128074	XP_001716763.1	ILMN_3182877	0002030379	A	2626	GTGCGAGTGTTTGCTGATGGAAACTGGCTGCTTCTGTGGGAATCCGGGCC				11q13.1e	PREDICTED: Homo sapiens hypothetical protein LOC100128074 (LOC100128074), mRNA.					
Homo sapiens	RefSeq	NM_001018041.1	ILMN_16230	EPM2A	NM_001018041.1	NM_001018041.1		7957	66346727	NM_001018041.1	EPM2A	NP_001018051.1	ILMN_1788156	0006510706	A	1257	GCCGGCTGTCTACATTGACGAAGAGGCAGCTAGCCAGGACACATTTCCAC	6	-	146056343-146056392	6q24.3a	Homo sapiens epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) (EPM2A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12915448] [evidence IDA]; Several ribosomes bound to one mRNA [goid 5844] [pmid 11001928] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [pmid 9931343] [evidence NAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 11001928] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 12915448] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 11001928] [evidence TAS]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 12915448] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 11001928] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 9931343] [evidence NAS]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 12915448] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12915448] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]	MELF; EPM2	MELF; EPM2
Homo sapiens	RefSeq	NM_001759.2	ILMN_166706	CCND2	NM_001759.2	NM_001759.2		894	16950656	NM_001759.2	CCND2	NP_001750.1	ILMN_2067656	0003460520	S	6183	CTCTCACAGTGTACTCTATAAGAGGTGTGGGTGTCTGTTTGGTCAGGATG	12	+	4284480-4284529	12p13.32a	Homo sapiens cyclin D2 (CCND2), mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [pmid 8114739] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [pmid 8114739] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of CDK activity [goid 45737] [pmid 8114739] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11896535] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8114739] [evidence IPI]	KIAK0002; MGC102758	KIAK0002; MGC102758
Homo sapiens	RefSeq	NR_029629.1	ILMN_388249	MIR216A	NR_029629.1	NR_029629.1		406998	262206316	NR_029629.1	MIR216A		ILMN_3311045	0000620017	S	26	GCTGGCAACTGTGAGATGTTCATACAATCCCTCACAGTGGTCTCTGGGAT				2p16.1d	Homo sapiens microRNA 216a (MIR216A), microRNA.					
Homo sapiens	RefSeq	NM_014917.2	ILMN_2708	NTNG1	NM_014917.2	NM_014917.2		22854	54312077	NM_014917.2	NTNG1	NP_055732.2	ILMN_2189371	0006940053	S	2769	CACTGTGCAGAGATTTCTCTGTAAGGGCAACGAACGTGCTGGCATCAAAG	1	+	107824987-107825036	1p13.3d	Homo sapiens netrin G1 (NTNG1), transcript variant 3, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14595443] [evidence IPI]	Lmnt1; KIAA0976	Lmnt1; KIAA0976
Homo sapiens	RefSeq	NM_014917.2	ILMN_2708	NTNG1	NM_014917.2	NM_014917.2		22854	54312077	NM_014917.2	NTNG1	NP_055732.2	ILMN_1727778	0004390333	S	2494	CCCCCTCTAAAAGCGCAAGCCAGTCATACCCCTGTATATCTTAGCAGCAC	1	+	107739455-107739471:107751827-107751853:107824756-107824761	1p13.3d	Homo sapiens netrin G1 (NTNG1), transcript variant 3, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence ISS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14595443] [evidence IPI]	Lmnt1; KIAA0976	Lmnt1; KIAA0976
Homo sapiens	RefSeq	XM_941312.1	ILMN_37245	LOC654222	XM_941312.1	XM_941312.1		654222	89067093	XM_941312.1	LOC654222	XP_946405.1	ILMN_1665743	0001820609	S	255	TGTCATTTATATGTTGTTTATGGGCATGGGCATTTCTCTCTTTTGTGTCC					PREDICTED: Homo sapiens similar to RAB8B, member RAS oncogene family (LOC654222), mRNA.					
Homo sapiens	RefSeq	NM_013384.3	ILMN_167075	LASS2	NM_181746.2	NM_181746.2		29956	115430221	NM_181746.2	LASS2	NP_859530.1	ILMN_1726108	0006380154	A	2075	CTACCTCTGCCAAAAAGTGGGGGCTGTACTGGGGACTGCTCGGATGATCT	1	-	150938029-150938078	1q21.2d	Homo sapiens LAG1 homolog, ceramide synthase 2 (LASS2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11543633] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	SP260; CerS2; MGC987; TMSG1; L3; FLJ10243	SP260; MGC987; TMSG1; FLJ10243; L3
Homo sapiens	RefSeq	NM_199452.1	ILMN_2912	ZNF365	NM_199452.2	NM_199452.2		22891	148596969	NM_199452.2	ZNF365	NP_955524.2	ILMN_1675762	0000010605	I	669	GCTGTGGTCTCTCCGAGCTCATCACGGCACCTCCCTATGCAGGAGTTTCA	10	+	64085341-64085390	10q21.2b	Homo sapiens zinc finger protein 365 (ZNF365), transcript variant D, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16682949] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC87345; KIAA0844; MGC41821; UAN; ZNF365D; Su48	MGC87345; KIAA0844; MGC41821; UAN; ZNF365D
Homo sapiens	RefSeq	NM_023915.2	ILMN_23242	GPR87	NM_023915.2	NM_023915.2		53836	31542857	NM_023915.2	GPR87	NP_076404.2	ILMN_1656422	0003140343	S	1354	CAGAACCAGGAGTGAAAGCATCAGATCACTGCAAAGTGTGAGAAGATCGG	3	-	152494681-152494730	3q25.1c	Homo sapiens G protein-coupled receptor 87 (GPR87), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	FKSG78; MGC131898; GPR95; KPG_002	FKSG78; MGC131898; GPR95; KPG_002
Homo sapiens	RefSeq	NM_205836.1	ILMN_178622	FBXO38	NM_205836.1	NM_205836.1		81545	45545408	NM_205836.1	FBXO38	NP_995308.1	ILMN_1686697	0002320224	I	2719	CCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATCTGA	5	+	147785288-147785337	5q33.1a	Homo sapiens F-box protein 38 (FBXO38), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		SP329; Fbx38; MOKA	Fbx38; SP329; MOKA
Homo sapiens	RefSeq	NM_016176.2	ILMN_768	SDF4	NM_016176.2	NM_016176.2		51150	18699731	NM_016176.2	SDF4	NP_057260.2	ILMN_2378257	0003310167	A	1191	ATGAACGAGTACAACGCGCTGAACGAGGCCAAGCAGATGATCGCCGTCGC	1	-	1142866-1142915	1p36.33b-p36.33a	Homo sapiens stromal cell derived factor 4 (SDF4), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RP5-902P8.6; Cab45	RP5-902P8.6; Cab45
Homo sapiens	RefSeq	NM_015351.1	ILMN_308786	TTC9	NM_015351.1	NM_015351.1		23508	150456464	NM_015351.1	TTC9	NP_056166.1	ILMN_3243117	0006480239	S	4059	GGCATCTGACCTGCACTGTCATCCCCTGCCTGGACTTTTGCGATGGACTC	14	+	70210672-70210721	14q24.2a	Homo sapiens tetratricopeptide repeat domain 9 (TTC9), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0227; TTC9A	KIAA0227; TTC9A
Homo sapiens	RefSeq	XM_001725190.1	ILMN_338865	LOC100132510	XM_001725190.1	XM_001725190.1		100132510	169168077	XM_001725190.1	LOC100132510	XP_001725242.1	ILMN_3280402	0005570553	M	65	CCTGTCCATACTGCAGGAGGGCCCAAGAGATCCTCAGTCAATTGTCCACC				5q34b	PREDICTED: Homo sapiens similar to hCG1979388 (LOC100132510), mRNA.					
Homo sapiens	RefSeq	NM_007078.1	ILMN_1636	LDB3	NM_007078.1	NM_007078.1		11155	45592958	NM_007078.1	LDB3	NP_009009.1	ILMN_1713534	0003190278	S	3915	TTTCCAAGCACGAAGCCACCAGTCTCCCCCAAGGAGCATCAGGAAGGGAC	10	+	88484423-88484472	10q23.2a	Homo sapiens LIM domain binding 3 (LDB3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10427098] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10427098] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PDLIM6; CYPHER; ldb3z4; KIAA0613; ZASP; KIAA01613; ORACLE	PDLIM6; CYPHER; ldb3z4; KIAA0613; ZASP; KIAA01613; ORACLE
Homo sapiens	RefSeq	NM_001866.2	ILMN_19298	COX7B	NM_001866.2	NM_001866.2		1349	18105038	NM_001866.2	COX7B	NP_001857.1	ILMN_2184049	0002260576	S	142	CAGCAAACAATGGCAAGGCAGAGCCACCAGAAACGTACACCTGATTTTCA	X	+	77044807-77044856	Xq21.1a	Homo sapiens cytochrome c oxidase subunit VIIb (COX7B), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [pmid 8382530] [evidence TAS]		
Homo sapiens	RefSeq	XM_001722530.1	ILMN_349374	LOC100127983	XM_001722530.1	XM_001722530.1		100127983	169172559	XM_001722530.1	LOC100127983	XP_001722582.1	ILMN_3193142	0000630026	A	348	CAAGGTCTTAATGAGCAACAGCAACAGCAGTCTCCAGTTAAGAAAGAGAG				8q21.3e	PREDICTED: Homo sapiens hypothetical protein LOC100127983 (LOC100127983), mRNA.					
Homo sapiens	RefSeq	NM_175068.2	ILMN_13180	KRT73	NM_175068.2	NM_175068.2		319101	31341282	NM_175068.2	KRT73	NP_778238.1	ILMN_1672120	0005220026	S	2210	CATCTGTGGGTACTTGTCCTTGTTTAGGCCTCACCTCCCTGCTCCTGTGT	12	-	53001378-53001427	12q13.13d	Homo sapiens keratin 73 (KRT73), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	MGC129636; K6IRS3; IRT6IRS3; KRT6IRS3; MGC129635	MGC129636; IRT6IRS3; KRT6IRS3; K6IRS3; MGC129635
Homo sapiens	RefSeq	NM_024825.2	ILMN_25294	PODNL1	NM_024825.2	NM_024825.2		79883	40254970	NM_024825.2	PODNL1	NP_079101.2	ILMN_1803220	0002900577	S	1774	CCTGCCCTGCCACGTCCCAAACATTCTAGTTAGCTGGTAAAGCAATCAGA	19	-	13904507-13904517:13904518-13904556	19p13.12c	Homo sapiens podocan-like 1 (PODNL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ23447; SLRR5B	FLJ23447; SLRR5B
Homo sapiens	RefSeq	NM_021648.4	ILMN_7730	TSPYL4	NM_021648.4	NM_021648.4		23270	46094050	NM_021648.4	TSPYL4	NP_067680.3	ILMN_1740500	0000610521	S	3234	GACCATCCACCATCACCCTTTTCCCCTTTGGTTTTGAAGGCCTTGCCCTA	6	-	116678671-116678720	6q22.1d	Homo sapiens TSPY-like 4 (TSPYL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]		KIAA0721; dJ486I3.2	KIAA0721; dJ486I3.2
Homo sapiens	RefSeq	XM_942097.1	ILMN_34866	LOC652578	XM_942097.1	XM_942097.1		652578	89063135	XM_942097.1	LOC652578	XP_947190.1	ILMN_1674590	0000630255	S	537	GAGATGATGTGTGGTCCCACTGAATGGTATCAGAGTTGTAGTCCTAGCTC					PREDICTED: Homo sapiens similar to Fc fragment of IgG, low affinity IIIa, receptor for (CD16) (LOC652578), mRNA.					
Homo sapiens	RefSeq	NM_181720.2	ILMN_162667	ARHGAP30	NM_001025598.1	NM_001025598.1		257106	71040097	NM_001025598.1	ARHGAP30	NP_001020769.1	ILMN_1750805	0001440634	A	4207	CAGCTCCCCACCCTCTGCCTCCAGTCACCATGTGCAAGAGAGGTCCTGTA	1	-	161016900-161016949	1q23.3a	Homo sapiens Rho GTPase activating protein 30 (ARHGAP30), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	FLJ00267; RP11-544M22.6; FLJ44128	FLJ00267; FLJ44128; RP11-544M22.6
Homo sapiens	RefSeq	NM_001025598.1	ILMN_162667	ARHGAP30	NM_001025598.1	NM_001025598.1		257106	71040097	NM_001025598.1	ARHGAP30	NP_001020769.1	ILMN_1751164	0007650747	I	2935	AGGTTCAGGTGTAGCGTCCCTGGAGGTTGACTGTGCCAAAGAGGGCAATC	1	-	161018172-161018221	1q23.3a	Homo sapiens Rho GTPase activating protein 30 (ARHGAP30), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	FLJ00267; RP11-544M22.6; FLJ44128	FLJ00267; FLJ44128; RP11-544M22.6
Homo sapiens	RefSeq	NM_000082.2	ILMN_4976	ERCC8	NM_000082.2	NM_000082.2		1161	55956771	NM_000082.2	ERCC8	NP_000073.1	ILMN_2348146	0006400209	A	504	TCTCCAGTCTCCACCAAGCACTGTTTGGTAGCAGTTGGTACTAGAGGACC	5	-	60235284-60235300:60236376-60236408	5q12.1b	Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 8 (ERCC8), transcript variant 1, mRNA.	Any complex formed of proteins that act in nucleotide-excision repair [goid 109] [pmid 12732143] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 16916636] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11782547] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11782547] [evidence IDA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 12732143] [evidence IDA]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [pmid 16916636] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 11782547] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 17297471] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 11782547] [evidence IDA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 7664335] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 12732143] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA repair [goid 45739] [pmid 7664335] [evidence IMP]; The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink [goid 51865] [pmid 12732143] [evidence IDA]	Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 8999876] [evidence IDA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 12732143] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7664335] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 8999876] [evidence IDA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 16916636] [evidence IDA]	CSA; CKN1	CSA; CKN1
Homo sapiens	RefSeq	NR_030256.1	ILMN_387956	MIR539	NR_030256.1	NR_030256.1		664612	262205637	NR_030256.1	MIR539		ILMN_3310975	0004780670	S	11	GAAATTATCCTTGGTGTGTTCGCTTTATTTATGATGAATCATACAAGGAC				14q32.31a	Homo sapiens microRNA 539 (MIR539), microRNA.					
Homo sapiens	RefSeq	NM_017733.2	ILMN_761	PIGG	NM_017733.2	NM_017733.2		54872	31377753	NM_017733.2	PIGG	NP_060203.2	ILMN_1769751	0002940682	S	2712	GCTTAGACACCTACGTGGAAATCCCAGCCGTGCTCCTGACAGCGCTTGGG	4	+	517656-517705	4p16.3d	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class G (PIGG), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15632136] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 15632136] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15632136] [evidence IDA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a substituted phosphate group, other than diphosphate or nucleotidyl residues, from one compound (donor) to a another (acceptor) [goid 16780] [pmid 15632136] [evidence EXP]; Catalysis of the reaction: ethanolamine phosphate (EtN-P) + Man-alpha-(1,2)-Man-alpha-(1,2)-Man-alpha-(1,6)-R = Man-alpha-(1,2)-Man-alpha-6-P-EtN-(1,2)-Man-alpha-(1,6)-R; R is Man-alpha(1,4)-GlcNH2-inositol-PO4-lipid. This reaction is the transfer of ethanolamine phosphate to C6 of second mannose in the GPI lipid precursor CP2 [goid 51267] [pmid 15632136] [evidence IDA]	RLGS1930; PRO4405; GPI7; MGC131903; LAS21; FLJ20265; FLJ39925	RLGS1930; PRO4405; GPI7; MGC131903; LAS21; FLJ20265; FLJ39925
Homo sapiens	RefSeq	XM_001719878.1	ILMN_350116	LOC100129890	XM_001719878.1	XM_001719878.1		100129890	169215241	XM_001719878.1	LOC100129890	XP_001719930.1	ILMN_3270411	0001010193	M	1929	CCAGCACGTGGTAGGCACGCCCTCAGAAGAAGTAGTGGGAGCAACAGGGC				21q22.3d	PREDICTED: Homo sapiens similar to hCG1750329 (LOC100129890), mRNA.					
Homo sapiens	RefSeq	XR_041424.1	ILMN_338114	KPNA7	XR_041424.1	XR_041424.1		402569	169171677	XR_041424.1	KPNA7		ILMN_3256550	0004120079	M	1371	CATCCTCCAGGCGGCAGAGAAACGGTCTGAGAAGGAAAACCTGTGTCTTC				7q22.1a	PREDICTED: Homo sapiens misc_RNA (KPNA7), miscRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]		
Homo sapiens	Unigene	Hs.582465	ILMN_134646	HS.582465	Hs.582465		Hs.582465		80960773	DA675095			ILMN_1850093	0003130279	S	300	AGGACCAGTCTTCAGCCGTGCCCATTACAGTAGCAGTGACAGCACACCAC	5	+	17530800-17530849		DA675095 NETRP2 Homo sapiens cDNA clone NETRP2005971 5, mRNA sequence					
Homo sapiens	RefSeq	NM_212479.1	ILMN_28670	ZMYND11	NM_212479.1	NM_212479.1		10771	47078242	NM_212479.1	ZMYND11	NP_997644.1	ILMN_1753110	0000510102	I	1935	GTACCACAGGTATGATGCCCGTTAATTCAGAAGGTAGCTGTGGCACATGC	10	+	285068-285117	10p15.3d	Homo sapiens zinc finger, MYND domain containing 11 (ZMYND11), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7621829] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 7621829] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7621829] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP11-486H9.1; BRAM1; MGC111056; BS69	RP11-486H9.1; BRAM1; MGC111056; BS69
Homo sapiens	RefSeq	NM_153837.1	ILMN_1415	GPR114	NM_153837.1	NM_153837.1		221188	24475870	NM_153837.1	GPR114	NP_722579.1	ILMN_1666902	0007380273	S	3601	GCTCTGCCACTTGCTAGCTGTGAGACTGTGGACAAACCACTCAGCCTCTG	16	+	56168442-56168491	16q13c-q13d	Homo sapiens G protein-coupled receptor 114 (GPR114), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	PGR27	PGR27
Homo sapiens	RefSeq	NM_001040458.1	ILMN_177321	ERAP1	NM_001040458.1	NM_001040458.1		51752	94818890	NM_001040458.1	ERAP1	NP_001035548.1	ILMN_2336220	0003930161	A	2504	GGGCTCAGTCTCAGAGCGAATGCTGCGGAGTCAACTACTACTCCTCGCCT	5	-	96144589-96144638	5q15d	Homo sapiens endoplasmic reticulum aminopeptidase 1 (ERAP1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11056387] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12748171] [evidence NAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 15691326] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10220586] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12748171] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [pmid 12748171] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 11056387] [evidence NAS]; The process by which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules [goid 19885] [pmid 12748171] [evidence NAS]; Any process that modulates the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45088] [pmid 12748171] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [pmid 11056387] [evidence NAS]; Any process that activates or increases angiogenesis [goid 45766] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 12748171] [evidence IDA]; Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 10220586] [evidence IDA]; Interacting selectively with the interleukin-6 receptor [goid 5138] [pmid 12748171] [evidence IPI]; Interacting selectively with a Type II interleukin-1 receptor [goid 5151] [pmid 15691326] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12748171] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [pmid 10220586] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10220586] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	APPILS; ALAP; PILSAP; ERAP1; ERAAP; ARTS-1; ERAAP1; KIAA0525; A-LAP; PILS-AP; ARTS1	APPILS; ALAP; PILSAP; ERAP1; ERAAP; ARTS-1; ERAAP1; KIAA0525; A-LAP; PILS-AP; ARTS1
Homo sapiens	RefSeq	XM_944073.1	ILMN_35057	LOC650162	XM_944073.1	XM_944073.1		650162	89059257	XM_944073.1	LOC650162	XP_949166.1	ILMN_1689915	0006380189	S	265	TACCTGTGTGAAAAGCACAAGGACCCCAATTACCCCAGCTTGGCAGCCAA					PREDICTED: Homo sapiens hypothetical protein LOC650162 (LOC650162), mRNA.					
Homo sapiens	RefSeq	NM_018396.1	ILMN_16836	METTL2B	NM_018396.2	NM_018396.2		55798	93141203	NM_018396.2	METTL2B	NP_060866.2	ILMN_1735958	0001090735	S	1314	GGAGTCCAGCCTGGGCAAAATAGCGAGAGACCCTGAATCTGAAAGTAATG	7	+	127929346-127929395	7q32.1a	Homo sapiens methyltransferase like 2B (METTL2B), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	METL; METTL2; PSENIP1; FLJ12760; METTL2A; FLJ11350	METL; METTL2; PSENIP1; FLJ11350
Homo sapiens	RefSeq	NM_012167.1	ILMN_28418	FBXO11	NM_012167.1	NM_012167.1		80204	30089921	NM_012167.1	FBXO11	NP_036299.1	ILMN_1765711	0002630196	I	1971	TTCATATTTGGCTATCTTTTGGGAGGGAGTTAGGAGTATGTGGGGTGTGT	2	-	48045858-48045907	2p16.3d	Homo sapiens F-box protein 11 (FBXO11), transcript variant 3, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531037] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16487488] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16487488] [evidence IDA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 16487488] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10531037] [evidence NAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17098746] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [pmid 16487488] [evidence IDA]; Catalysis of the transfer of a methyl group to the carbon atom of an arginine residue in a protein [goid 35244] [pmid 16487488] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ12673; PRMT9; UG063H01; MGC44383; FBX11; VIT1	FLJ12673; PRMT9; UG063H01; MGC44383; FBX11; VIT1
Homo sapiens	RefSeq	NM_020945.1	ILMN_363987	WDFY4	NM_020945.1	NM_020945.1		57705	191252800	NM_020945.1	WDFY4	NP_065996.1	ILMN_3236551	0001450292	S	9731	GCCTCCTTCCCCACAGTTCTCAAGGAAGGGCCTCTGGCAATCACAGCTCT	10	+	50190719-50190768	10q11.22d	Homo sapiens WDFY family member 4 (WDFY4), mRNA.					
Homo sapiens	RefSeq	XM_936874.1	ILMN_32138	LOC642210	XM_936874.1	XM_936874.1		642210	89025917	XM_936874.1	LOC642210	XP_941967.1	ILMN_1715926	0006510753	S	61	TCATGGCCGCCCTCAGACCCCTTGTGAAGCCCAAGATCGTCAAAAAGAGA					PREDICTED: Homo sapiens similar to 60S ribosomal protein L32 (LOC642210), mRNA.					
Homo sapiens	RefSeq	NM_018296.4	ILMN_180406	LRRC36	NM_018296.4	NM_018296.4		55282	62177183	NM_018296.4	LRRC36	NP_060766.4	ILMN_1774389	0003830128	S	2095	GCAGCAGCTGAATAAGGAGCCAAAAGGTTATTCCGGGAAAGCGCTCCTGC	16	+	65976304-65976353	16q22.1b	Homo sapiens leucine rich repeat containing 36 (LRRC36), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ11004; XLHSRF2; RORBP70	FLJ11004; XLHSRF2; RORBP70
Homo sapiens	RefSeq	XM_929688.1	ILMN_32389	LOC646740	XM_929688.1	XM_929688.1		646740	89028000	XM_929688.1	LOC646740	XP_934781.1	ILMN_1667326	0004200739	S	2	TGGTTCTGAATCAAGGTGATTGTGATAATAGCGATGATGAAGATGACATC	8	+	24031798-24031847		PREDICTED: Homo sapiens hypothetical protein LOC646740 (LOC646740), mRNA.					
Homo sapiens	RefSeq	NM_207405.1	ILMN_12186	C4ORF50	NM_207405.1	NM_207405.1		389197	46409441	NM_207405.1	C4orf50	NP_997288.1	ILMN_1652348	0007570349	S	2896	GCTTTGAGCATCAGGAACATGACAGAGAGAGGACAGAAACCCGGTGCAGC	4	-	6009978-6010027	4p16.1g-p16.1f	Homo sapiens chromosome 4 open reading frame 50 (C4orf50), mRNA.					
Homo sapiens	RefSeq	NM_170746.2	ILMN_29968	C11ORF31	NM_170746.2	NM_170746.2		280636	46370090	NM_170746.2	C11orf31	NP_734467.1	ILMN_1786872	0000050360	S	957	GGACAAAGCCAGCCTTGTGGAGTTGGTAGTCCTTGTGTTTTTCATAGCCC	11	+	57267122-57267171	11q12.1b	Homo sapiens chromosome 11 open reading frame 31 (C11orf31), mRNA.				C17orf10; SELH	C17orf10; SELH
Homo sapiens	RefSeq	XM_498841.2	ILMN_175323	LOC440748	XM_498841.3	XM_498841.3		440748	113411846	XM_498841.3	LOC440748	XP_498841.1	ILMN_1756637	0001450382	S	976	TCCTGGATGTGTCCCGTGCCGAGCAGGCTTTTTCCTGCAGATTTGCCCCG	1	-	92635-92679:92680-92684		PREDICTED: Homo sapiens hypothetical LOC440748 (LOC440748), mRNA.					
Homo sapiens	RefSeq	XM_927717.1	ILMN_175323	LOC440748	XM_498841.3	XM_498841.3		440748	113411846	XM_498841.3	LOC440748	XP_498841.1	ILMN_1708145	0003830594	S	2610	GGGGTTTTTTGGATGCACTATATTAAAACATGAGATTTGCAATGGCATTG	1	-	91001-91050		PREDICTED: Homo sapiens hypothetical LOC440748 (LOC440748), mRNA.					
Homo sapiens	RefSeq	NM_134442.2	ILMN_10732	CREB1	NM_134442.2	NM_134442.2		1385	22219460	NM_134442.2	CREB1	NP_604391.1	ILMN_2382758	0007510092	A	1419	TCAACGCCAGGAATCATGAAGAGACTTCTGCTTTTCAACCCCCACCCTCC	2	+	208170239-208170288	2q33.3c	Homo sapiens cAMP responsive element binding protein 1 (CREB1), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10909971] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9829964] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9770464] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9687510] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8798441] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2974179] [evidence TAS]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]; The secretion of milk by the mammary gland [goid 7595] [evidence IEA]; Any process that modulates the size of a cell [goid 8361] [evidence IEA]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10909971] [evidence TAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 8552098] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC9284; CREB	MGC9284; CREB
Homo sapiens	RefSeq	NM_024425.2	ILMN_10241	WT1	NM_024426.3	NM_024426.3		7490	65508003	NM_024426.3	WT1	NP_077744.3	ILMN_1802174	0007380603	A	2229	CAAGGCATCGGGGGTGAATCTTGTCTAACATTCCCGAGGTCAGCCAGGCT	11	-	32413013-32413062	11p13e	Homo sapiens Wilms tumor 1 (WT1), transcript variant D, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 7585606] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IEA]; The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IEA]; The process whose specific outcome is the progression of the mesonephros over time, from its formation to the mature structure. The mesonephros is a transient excretory organ of the embryo [goid 1823] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7862533] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8393820] [evidence NAS]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IEA]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7862533] [evidence NAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8393820] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	GUD; WT33; WAGR; WIT-2	GUD; WT33; WAGR; WIT-2
Homo sapiens	RefSeq	NM_021926.2	ILMN_4014	ALX4	NM_021926.2	NM_021926.2		60529	55743091	NM_021926.2	ALX4	NP_068745.2	ILMN_1803384	0004230358	S	1204	TGTTTGGAGCAGCCAGCCTCAGCCCAGGCCTCAATGGCTACGAGCTCAAC	11	-	44243066-44243115	11p11.2e	Homo sapiens ALX homeobox 4 (ALX4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11137991] [evidence NAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [evidence IEA]; The process by which the anatomical structures of the skeleton are generated and organized. Morphogenesis pertains to the creation of form [goid 48705] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	KIAA1788; PFM2; FPP; PFM1; PFM	KIAA1788; PFM2; FPP; PFM1; PFM
Homo sapiens	RefSeq	NM_032641.1	ILMN_5003	SPSB2	NM_032641.1	NM_032641.1		84727	14249177	NM_032641.1	SPSB2	NP_116030.1	ILMN_1787541	0000380551	S	893	TTGCCCCCTGCCATGAAGCGCTACCTGCTCTACCAGTGAGCCCTGTGATA	12	-	6850605-6850616:6850617-6850654	12p13.31d	Homo sapiens splA/ryanodine receptor domain and SOCS box containing 2 (SPSB2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC2519; GRCC9; SSB2; SSB-2	MGC2519; GRCC9; SSB2; SSB-2
Homo sapiens	RefSeq	NM_178312.1	ILMN_24034	GGTLC1	NM_178311.1	NM_178311.1		92086	30581154	NM_178311.1	GGTLC1	NP_842563.1	ILMN_1692188	0002000192	A	891	AGGCGGACAAGGCTGACAAGCAATCCAGGAACAAAATACTCACCAGGACG	20	-	23913795-23913844	20p11.21b	Homo sapiens gamma-glutamyltransferase light chain 1 (GGTLC1), transcript variant A, mRNA.			Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]	dJ831C21.2; MGC50550	dJ831C21.2; MGC50550
Homo sapiens	RefSeq	NM_178311.1	ILMN_24034	GGTLC1	NM_178311.1	NM_178311.1		92086	30581154	NM_178311.1	GGTLC1	NP_842563.1	ILMN_1680730	0000060735	I	19	CGTCCTCGTCCAGCCGCCAACTCGGCCAAAGGCGAAGCCAGCAGTTTCTT	20	-	23917348-23917397	20p11.21b	Homo sapiens gamma-glutamyltransferase light chain 1 (GGTLC1), transcript variant A, mRNA.			Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]	dJ831C21.2; MGC50550	dJ831C21.2; MGC50550
Homo sapiens	RefSeq	XM_001130489.1	ILMN_169888	LOC729669	XM_001130489.1	XM_001130489.1		729669	113413999	XM_001130489.1	LOC729669	XP_001130489.1	ILMN_3301763	0001410707	M	269	GGGAGAAGGTAGCTGTCGGGCATTCCCCTGGCGCTGAAGGGCAGATTGCT				2q14.2c	PREDICTED: Homo sapiens hypothetical LOC729669 (LOC729669), mRNA.					
Homo sapiens	RefSeq	NM_018050.2	ILMN_14144	MANSC1	NM_018050.2	NM_018050.2		54682	31542649	NM_018050.2	MANSC1	NP_060520.2	ILMN_2142752	0001190528	S	1960	GAGCCACCACAGCTGGCCCCCTTCTGTTTTATGTTTGGTTTTTGAGAAGG	12	-	12482505-12482554	12p13.2a	Homo sapiens MANSC domain containing 1 (MANSC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]		Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]	FLJ10298; LOH12CR3; 9130403P13Rik	FLJ10298; LOH12CR3; 9130403P13Rik
Homo sapiens	RefSeq	NM_018050.2	ILMN_14144	MANSC1	NM_018050.2	NM_018050.2		54682	31542649	NM_018050.2	MANSC1	NP_060520.2	ILMN_1652490	0000150041	S	1446	CCTGGTGATAGGCCTCGTCCTCCTGGGTAGAATCCTCTCGGAATCACTCC	12	-	12483019-12483068	12p13.2a	Homo sapiens MANSC domain containing 1 (MANSC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]		Catalysis of the random hydrolysis of N-acetyl-beta-D-glucosaminide 1,4-beta-linkages in chitin and chitodextrins [goid 4568] [evidence IEA]	FLJ10298; LOH12CR3; 9130403P13Rik	FLJ10298; LOH12CR3; 9130403P13Rik
Homo sapiens	RefSeq	NM_022644.2	ILMN_4947	CSH2	NM_022644.2	NM_022644.2		1443	20819984	NM_022644.2	CSH2	NP_072170.1	ILMN_2391071	0000130719	A	995	CTGTAGAGGGTAGCTGTGGCTTCTAGGTGCCCGCGTGGCATCCTGTGACC	17	-	59303195-59303244	17q23.3b	Homo sapiens chorionic somatomammotropin hormone 2 (CSH2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	CSB; hCS-B; CS-2	CSB; hCS-B; CS-2
Homo sapiens	RefSeq	NM_022644.2	ILMN_4947	CSH2	NM_022644.2	NM_022644.2		1443	20819984	NM_022644.2	CSH2	NP_072170.1	ILMN_2285280	0002070382	I	605	ACCCCACTGGCTTAGAGGGCTGGGGGAGAGAAACATGCTGCCCTCTTTGT	17	-	59303585-59303620:59303621-59303634	17q23.3b	Homo sapiens chorionic somatomammotropin hormone 2 (CSH2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	CSB; hCS-B; CS-2	CSB; hCS-B; CS-2
Homo sapiens	RefSeq	NM_005008.2	ILMN_12828	NHP2L1	NM_005008.2	NM_005008.2		4809	51317374	NM_005008.2	NHP2L1	NP_004999.1	ILMN_1709809	0002360445	I	145	ACGCGTGGTATCCTCGCGGTGTCCGGCAAGAGACTACCAAGACAGACGCT	22	-	42078362-42078362:42078363-42078411	22q13.2a-q13.2b	Homo sapiens NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) (NHP2L1), transcript variant 1, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8978773] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10593953] [evidence TAS]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10593953] [evidence TAS]	OTK27; SNU13; NHPX	OTK27; SNU13; NHPX
Homo sapiens	RefSeq	XR_038482.1	ILMN_337272	LOC100128096	XR_038482.1	XR_038482.1		100128096	169166496	XR_038482.1	LOC100128096		ILMN_3179148	0006330450	A	76	CCTCCTGAGTAGCTGAGACTACAGGTGTGTGCCACTGTGCCCAGCAAGAT	4	-	9260661-9260710	4p16.1c	PREDICTED: Homo sapiens hypothetical LOC100128096 (LOC100128096), miscRNA.					
Homo sapiens	RefSeq	XM_926192.1	ILMN_37974	LOC642504	XM_926192.1	XM_926192.1		642504	88995758	XM_926192.1	LOC642504	XP_931285.1	ILMN_1808185	0000430471	S	538	GCACCTGAAAAAGCTGCAGACACTCAATGCCAACCCATGAGAGCAGCTGG	6	+	69623922-69623971		PREDICTED: Homo sapiens hypothetical protein LOC642504 (LOC642504), mRNA.					
Homo sapiens	RefSeq	XM_936606.1	ILMN_33839	LOC647551	XM_936606.1	XM_936606.1		647551	88969491	XM_936606.1	LOC647551	XP_941699.1	ILMN_1666055	0004220487	S	454	GTAGAAATCATTCCAGGCTCTACCTTCTCTTGGCATTTCCTAGGGCTCTG					PREDICTED: Homo sapiens similar to spen homolog, transcriptional regulator (LOC647551), mRNA.					
Homo sapiens	RefSeq	XM_934010.1	ILMN_46370	NBPF9	XM_934010.1	XM_934010.1		440670	88943141	XM_934010.1	NBPF9	XP_939103.1	ILMN_1794015	0003190554	I	6479	TGGGGGTACCTTCTACCAGCATGTTGTAGCACACTCATCTGTGCTCTACC	1	-	146038675-146038724		PREDICTED: Homo sapiens neuroblastoma breakpoint family, member 9, transcript variant 20 (NBPF9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NM_003706.1	ILMN_29328	PLA2G4C	NM_003706.1	NM_003706.1		8605	4505850	NM_003706.1	PLA2G4C	NP_003697.1	ILMN_1810191	0001990672	S	2265	TGCCTTCCACTGCTCCTTTATGACTGCACTTCTAGCCAGTAGCTCTGCAC	19	-	53243026-53243075	19q13.32c	Homo sapiens phospholipase A2, group IVC (cytosolic, calcium-independent) (PLA2G4C), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10085124] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10085124] [evidence TAS]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10085124] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10085124] [evidence NAS]; The reproductive process in which the parent is separated from its offspring either by giving birth to live young or by laying eggs [goid 7567] [pmid 10085124] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 19369] [pmid 10085124] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue [goid 46475] [pmid 10085124] [evidence IDA]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 10085124] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate; does not require Ca2+ [goid 47499] [pmid 10085124] [evidence IDA]	CPLA2-gamma; DKFZp586C0423	CPLA2-gamma; DKFZp586C0423
Homo sapiens	RefSeq	XM_928436.1	ILMN_41323	LOC645391	XM_928436.1	XM_928436.1		645391	89027747	XM_928436.1	LOC645391	XP_933529.1	ILMN_1682600	0003400711	S	84	TTAGGAGGCAGTACCCTAAGAGTGGTGAAAACCCCTCCCACTGCTCACCT	8	-	7140760-7140809		PREDICTED: Homo sapiens hypothetical protein LOC645391 (LOC645391), mRNA.					
Homo sapiens	RefSeq	XR_015662.2	ILMN_171138	LOC731954	XR_015662.2	XR_015662.2		731954	169201961	XR_015662.2	LOC731954		ILMN_3298400	0006580019	M	797	GAGTAGGGAGACGCCAGAGGAGCCTCACGGTCATGTCCAACACCACCGCA				10p11.23a	PREDICTED: Homo sapiens similar to supervillin (LOC731954), mRNA.					
Homo sapiens	RefSeq	XM_001722475.1	ILMN_334546	LOC729629	XM_001722475.1	XM_001722475.1		729629	169217593	XM_001722475.1	LOC729629	XP_001722527.1	ILMN_3297311	0005690424	M	3	GGCGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAGGTG				Xp22.33d,Yp11.32a	PREDICTED: Homo sapiens hypothetical LOC729629 (LOC729629), mRNA.					
Homo sapiens	RefSeq	XM_001134185.1	ILMN_180900	TBC1D3F	XM_001134185.1	XM_001134185.1		729873	113426786	XM_001134185.1	TBC1D3F	XP_001134185.1	ILMN_3223246	0004050403	A	2621	GCTCAAGCATCTTAGGGCCTCTATGAAGAAACTAACAAGAAAGAAGGGGG	17	+	33367370-33367419	17q12c	PREDICTED: Homo sapiens TBC1 domain family, member 3F, transcript variant 11 (TBC1D3F), mRNA.					
Homo sapiens	RefSeq	XM_001134185.1	ILMN_180900	TBC1D3F	XM_001134185.1	XM_001134185.1		729873	113426786	XM_001134185.1	TBC1D3F	XP_001134185.1	ILMN_3299800	0002760615	M	72	TACAGCAGTTACACACAGGCAGTGGTATCTGTGAGCAGCTCTGTGGACTC	17	+	33358394-33358443	17q12c	PREDICTED: Homo sapiens TBC1 domain family, member 3F, transcript variant 11 (TBC1D3F), mRNA.					
Homo sapiens	RefSeq	NM_021729.4	ILMN_13229	VPS11	NM_021729.4	NM_021729.4		55823	62865896	NM_021729.4	VPS11	NP_068375.3	ILMN_1717781	0006220563	S	3063	CTAGCAGTGTAGATCATTCCAGATCAGTGGGGGAGGGCACCTCAGCAACC	11	+	118457739-118457788	11q23.3e	Homo sapiens vacuolar protein sorting 11 homolog (S. cerevisiae) (VPS11), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PEP5; END1; RNF108; hVPS11	PEP5; END1; RNF108; hVPS11
Homo sapiens	RefSeq	NM_006904.6	ILMN_169762	PRKDC	NM_006904.6	NM_006904.6		5591	31340617	NM_006904.6	PRKDC	NP_008835.5	ILMN_2334121	0003390152	A	12727	GCTTTCAAAGCATTTACAAGTGCTGCAAGTTAGTGAAACAGCTGTCTCCG	8	-	48853728-48853774:48853842-48853844	8q11.21a-q11.21b	Homo sapiens protein kinase, DNA-activated, catalytic polypeptide (PRKDC), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12065431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12023295] [evidence EXP]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [pmid 15194694] [evidence IDA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pro-B cell. Pro-B cells are the earliest stage of the B cell lineage and undergo heavy chain D and J gene rearrangements, although they are not fully committed [goid 2328] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 7671312] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [pmid 15194694] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, requiring the presence of DNA [goid 4677] [pmid 15194694] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442054] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	XRCC7; p350; DNPK1; HYRC1; HYRC; DNAPK	XRCC7; p350; DNPK1; HYRC1; HYRC; DNAPK
Homo sapiens	RefSeq	NM_006904.6	ILMN_169762	PRKDC	NM_006904.6	NM_006904.6		5591	31340617	NM_006904.6	PRKDC	NP_008835.5	ILMN_2253648	0005490445	I	11494	AAGGACCTTCTTTTGAACACCATGTCCCAAGAGGAGAAGGCGGCTTACCT	8	-	48864313-48864352:48866180-48866189	8q11.21a-q11.21b	Homo sapiens protein kinase, DNA-activated, catalytic polypeptide (PRKDC), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12065431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12023295] [evidence EXP]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [pmid 15194694] [evidence IDA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pro-B cell. Pro-B cells are the earliest stage of the B cell lineage and undergo heavy chain D and J gene rearrangements, although they are not fully committed [goid 2328] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 7671312] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [pmid 15194694] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, requiring the presence of DNA [goid 4677] [pmid 15194694] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442054] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	XRCC7; p350; DNPK1; HYRC1; HYRC; DNAPK	XRCC7; p350; DNPK1; HYRC1; HYRC; DNAPK
Homo sapiens	RefSeq	NM_153708.1	ILMN_28475	RTP1	NM_153708.2	NM_153708.2		132112	114687644	NM_153708.2	RTP1	NP_714919.2	ILMN_1813450	0004490730	S	1861	CCCCCTAAAGCCACAGGGATGGGGTATCTTCAGCAAGAGAGAGGGCGTTA	3	+	186918897-186918946	3q27.3b	Homo sapiens receptor (chemosensory) transporter protein 1 (RTP1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 15550249] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which a protein is incorporated into a biological membrane [goid 51205] [pmid 15550249] [evidence IDA]	Interacting selectively with an olfactory receptor [goid 31849] [pmid 15550249] [evidence IMP]	MGC35450	MGC35450
Homo sapiens	RefSeq	XM_001716307.1	ILMN_345557	LOC100133881	XM_001716307.1	XM_001716307.1		100133881	169173215	XM_001716307.1	LOC100133881	XP_001716359.1	ILMN_3244142	0003450246	S	869	TATGGAGACGAGGAGAGGTGGACTGTCAGGAGGTGGAGAGAGGTGACCCA					PREDICTED: Homo sapiens similar to GDNF family receptor alpha-2 precursor (GFR-alpha-2) (LOC100133881), mRNA.					
Homo sapiens	RefSeq	NM_007204.3	ILMN_182384	DDX20	NM_007204.3	NM_007204.3		11218	14251211	NM_007204.3	DDX20	NP_009135.3	ILMN_1694983	0002900300	S	3391	GAGGCTGTGAAAGCTGTCCACATTTTTGCTGTGTATTAAATAGCTGTGGG	1	+	112111667-112111716	1p13.2d	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 (DDX20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10383418] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10601333] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10383418] [evidence TAS]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The formation of a tri-snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins. This includes reannealing of U4 and U6 (or U4atac and U6atac) snRNAs released from previous rounds of splicing to reform the U4/U6 snRNP (or U4atac/U6atac snRNP) as well as the subsequent association of the U5 snRNP with the U4/U6 snRNP (or U4atac/U6atac snRNP) to form a tri-snRNP that is ready to reassemble into another spliceosome complex [goid 244] [pmid 10601333] [evidence TAS]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 10383418] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	GEMIN3; DKFZp434H052; DP103	GEMIN3; DKFZp434H052; DP103
Homo sapiens	RefSeq	XM_001725242.1	ILMN_340151	LOC100133002	XM_001725242.1	XM_001725242.1		100133002	169166252	XM_001725242.1	LOC100133002	XP_001725294.1	ILMN_3239730	0004880121	S	1837	CCACCCTAGTCCCCGCAGCCGCCGCGTCACCGCCATTTTTTAAAGGGTCC	4	+	132900342-132900391	4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100133002 (LOC100133002), mRNA.					
Homo sapiens	RefSeq	NM_001122716.1	ILMN_356848	CXORF64	NM_001122716.1	NM_001122716.1		100130613	170016022	NM_001122716.1	CXorf64	NP_001116188.1	ILMN_3247835	0003180242	S	935	GGGAATGCCAGCTCCTGCATCACCCAACAGAGAGCACAGCTGATGGCAAA	X	+	125955476-125955518:125955519-125955525	Xq25e	Homo sapiens chromosome X open reading frame 64 (CXorf64), mRNA.					
Homo sapiens	RefSeq	NM_000501.1	ILMN_167035	ELN	NM_001081754.1	NM_001081754.1		2006	126352445	NM_001081754.1	ELN	NP_001075223.1	ILMN_1757506	0001300156	S	1876	TAAAGCAGCCAAATATGGAGCAGCAGTGCCTGGGGTCCTTGGAGGGCTCG	7	+	73113389-73113405:73115419-73115451	7q11.23b	Homo sapiens elastin (ELN), transcript variant 4, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence NAS]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 9873040] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8096434] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 9873040] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9607766] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9580666] [evidence TAS]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; A component of the extracellular matrix that enables the matrix to recoil after transient stretching [goid 30023] [evidence NAS]	FLJ38671; SVAS; WS; FLJ43523; WBS	SVAS; elastin; WS; WBS
Homo sapiens	RefSeq	NM_001081754.1	ILMN_167035	ELN	NM_001081754.1	NM_001081754.1		2006	126352445	NM_001081754.1	ELN	NP_001075223.1	ILMN_2385672	0006130577	A	2693	ACCCAAGCACCTGAAGCCTCAAAGCTGGATTCGCTCTAGCATCCCTCCTC	7	+	73121432-73121481	7q11.23b	Homo sapiens elastin (ELN), transcript variant 4, mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence NAS]	The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 9873040] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8096434] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 9873040] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9607766] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9580666] [evidence TAS]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; A component of the extracellular matrix that enables the matrix to recoil after transient stretching [goid 30023] [evidence NAS]	FLJ38671; SVAS; WS; FLJ43523; WBS	FLJ38671; SVAS; WS; FLJ43523; WBS
Homo sapiens	RefSeq	XM_001719245.1	ILMN_345361	LOC100128336	XM_001719245.1	XM_001719245.1		100128336	169215455	XM_001719245.1	LOC100128336	XP_001719297.1	ILMN_3188467	0001110414	A	7	TGTGAATGTGGGGTCACCCTGGCCGAACCCTCAAACCCTGCTGGGCCCAA				21q22.3f	PREDICTED: Homo sapiens hypothetical LOC100128336 (LOC100128336), mRNA.					
Homo sapiens	RefSeq	NM_178226.1	ILMN_714	FBXW5	NM_178226.1	NM_178226.1		54461	30749197	NM_178226.1	FBXW5	NP_839891.1	ILMN_1805662	0000290465	I	693	GGGTTGACCCTGCCCCCGCCCCACGCCGACAGCCTGTCCAGCCCCGGCCT	9	-	138956976-138957025	9q34.3e	Homo sapiens F-box and WD-40 domain protein 5 (FBXW5), transcript variant 3, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15070733] [evidence IPI]	RP11-229P13.10; DKFZP434B205; Fbw5; MGC20962	RP11-229P13.10; DKFZP434B205; Fbw5; MGC20962
Homo sapiens	RefSeq	XM_934842.1	ILMN_170805	LOC729264	XM_001133677.1	XM_001133677.1		729264	113425968	XM_001133677.1	LOC729264	XP_001133677.1	ILMN_1676239	0005720475	I	1990	TCAGCAGGACCAGAGCGCCCCTTGGTCCCTCCCAACACATGAGGGTAGTT	16	+	32173507-32173556	16p11.2b	PREDICTED: Homo sapiens similar to TP53TG3 protein, transcript variant 2 (LOC729264), mRNA.					
Homo sapiens	RefSeq	NM_016212.1	ILMN_170805	LOC729264	XM_001133677.1	XM_001133677.1		729264	113425968	XM_001133677.1	LOC729264	XP_001133677.1	ILMN_1744252	0002650056	A	3142	TCACGTGTCTTCACGCATCTCTTGAATTGGAAATTGTGCCCTGGAGACTG	16	+	32174659-32174708	16p11.2b	PREDICTED: Homo sapiens similar to TP53TG3 protein, transcript variant 2 (LOC729264), mRNA.					TP53TG3A
Homo sapiens	RefSeq	XM_001723486.1	ILMN_338492	LOC100130476	XM_001723486.1	XM_001723486.1		100130476	169169784	XM_001723486.1	LOC100130476	XP_001723538.1	ILMN_3257004	0000520494	M	535	CCCAGACAGAAACGTCCAACAAACTCCCAGTCCAGGAGCGCTGCAAAACC				6q23.3d	PREDICTED: Homo sapiens similar to hCG2036711 (LOC100130476), mRNA.					
Homo sapiens	RefSeq	NM_001716.2	ILMN_27589	BLR1	NM_001716.2	NM_001716.2		643	14589867	NM_001716.2	BLR1	NP_001707.1	ILMN_1699669	0006580601	I	84	CATGAACTACCCGCTAACGCTGGAAATGGACCTCGAGAACCTGGAGGACC	11	+	118259860-118259860:118259861-118259909	11q23.3e	Homo sapiens Burkitt lymphoma receptor 1, GTP binding protein (chemokine (C-X-C motif) receptor 5) (BLR1), transcript variant 1, mRNA.				MDR15; MGC117347; CXCR5; CD185	MDR15; MGC117347; CXCR5; CD185
Homo sapiens	RefSeq	NM_004558.2	ILMN_25657	NRTN	NM_004558.2	NM_004558.2		4902	46255055	NM_004558.2	NRTN	NP_004549.1	ILMN_1665319	0005310468	S	867	TACGAGGACGAGGTGTCCTTCCTGGACGCGCACAGCCGCTACCACACGGT	19	+	5779098-5779147	19p13.3b	Homo sapiens neurturin (NRTN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 8945474] [evidence TAS]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [pmid 15242795] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 9286710] [evidence TAS]; The process whose specific outcome is the progression of a nerve over time, from its formation to the mature structure [goid 21675] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [pmid 15242795] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	NTN	NTN
Homo sapiens	Unigene	Hs.569542	ILMN_121723	HS.569542	Hs.569542		Hs.569542		27787920	CB049633			ILMN_1867423	0005810240	S	198	CAGCATATTTTGGATTTGGGGGATGGCCTTGTGGGCGCGAGGTTCCTCCG	16	+	77820721-77820770		NISC_gj12b01.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:3271249 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001716871.1	ILMN_348328	LOC100129303	XM_001716871.1	XM_001716871.1		100129303	169205946	XM_001716871.1	LOC100129303	XP_001716923.1	ILMN_3191988	0006330390	A	510	CTGGGGCTCCTCCGGAGAATCAGCTGGTAGAACCTGAGGCTGTCAGCATA	13	-	50724050-50724099	13q14.3c	PREDICTED: Homo sapiens hypothetical protein LOC100129303 (LOC100129303), mRNA.					
Homo sapiens	RefSeq	NM_001736.2	ILMN_168257	C5AR1	NM_001736.3	NM_001736.3		728	112293258	NM_001736.3	C5AR1	NP_001727.1	ILMN_1689836	0006450092	S	2005	ACAGAGGGATCTTGTGTACCCTTCACCCAGCCTCCCCCAATGGCAACATC	19	+	47824990-47825039	19q13.32b	Homo sapiens complement component 5a receptor 1 (C5AR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2007135] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2007135] [evidence TAS]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 7649993] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10352266] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9590258] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 8779720] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8702752] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2007135] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 7649993] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 8702752] [evidence TAS]; The series of events required for an organism to receive a sensory chemical stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7606] [pmid 9590258] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with anaphylatoxin C5a to initiate a change in cell activity [goid 4944] [pmid 10352266] [evidence TAS]	CD88; C5AR; C5A; C5R1	CD88; C5AR; C5A; C5R1
Homo sapiens	RefSeq	XM_001713657.1	ILMN_343545	LOC100130707	XM_001713657.1	XM_001713657.1		100130707	169161786	XM_001713657.1	LOC100130707	XP_001713709.1	ILMN_3242551	0006200154	S	313	CTAGGAAAAGGCCTGAAGATTCCCCAGCTATACCAGTCTGGAGTGGTTGT					PREDICTED: Homo sapiens hypothetical protein LOC100130707 (LOC100130707), mRNA.					
Homo sapiens	Unigene	Hs.352677	ILMN_87223	HS.352677	Hs.352677		Hs.352677		18978757	BM668860			ILMN_1879066	0004290047	S	443	GCACTCTAGACCTAAGTTGTCCAATATGGTAGCCACTTGCCACATGTGAC	2	-	47955909-47955958		UI-E-CK1-afn-i-01-0-UI.s2 UI-E-CK1 Homo sapiens cDNA clone UI-E-CK1-afn-i-01-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_144985.2	ILMN_1657	CDH24	NM_022478.2	NM_022478.2		64403	32880205	NM_022478.2	CDH24	NP_071923.2	ILMN_1693928	0004560382	A	2745	CTCTCCAGGAATCTTTGTCTCTATCTGTGACACGCTCCTCTGTCCGGGCC	14	-	22586787-22586836	14q11.2f	Homo sapiens cadherin-like 24 (CDH24), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 12734196] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 12734196] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ25193; CDH11L; MGC131880	FLJ25193; CDH11L; MGC131880
Homo sapiens	RefSeq	NM_022478.2	ILMN_1657	CDH24	NM_022478.2	NM_022478.2		64403	32880205	NM_022478.2	CDH24	NP_071923.2	ILMN_1660321	0006560326	I	1459	TGGAGCTGGGGGCCAGAAAGGGGCTGGGTACCTCTTCTGGTTGCTGAGTG	14	-	22591080-22591129	14q11.2f	Homo sapiens cadherin-like 24 (CDH24), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 12734196] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 12734196] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ25193; CDH11L; MGC131880	FLJ25193; CDH11L; MGC131880
Homo sapiens	RefSeq	XM_936419.1	ILMN_46136	LOC647348	XM_936419.1	XM_936419.1		647348	89031879	XM_936419.1	LOC647348	XP_941512.1	ILMN_1755986	0006840037	S	33	GTTGGCCCACATTGTCCTGGCCGATGCAGTTGAGAGGGAGAAGCAAATTG					PREDICTED: Homo sapiens similar to FXYD domain-containing ion transport regulator 6 (LOC647348), mRNA.					
Homo sapiens	Unigene	Hs.22381	ILMN_71758	HS.22381	Hs.22381		Hs.22381		13297096	BG403648			ILMN_1879879	0006940273	S	431	CAGCAGTGCCACCTGTCTCATGGATGCTGTAAGAACCTCACGGAGCAGCA	2	+	29029291-29029340		602419370F1 NIH_MGC_93 Homo sapiens cDNA clone IMAGE:4526368 5, mRNA sequence					
Homo sapiens	RefSeq	XM_937850.1	ILMN_43277	LOC285176	XM_937850.1	XM_937850.1		285176	88959103	XM_937850.1	LOC285176	XP_942943.1	ILMN_1694327	0000290162	A	28	CAGGCCTTTCCAATGGATGTTCATGTTTCTGACCTTGCGCTACCCCAATG				2q35a	PREDICTED: Homo sapiens similar to ribosomal protein L10 (LOC285176), mRNA.					
Homo sapiens	RefSeq	NM_001004708.1	ILMN_26195	OR4D6	NM_001004708.1	NM_001004708.1		219983	52317244	NM_001004708.1	OR4D6	NP_001004708.1	ILMN_1813776	0004810603	S	597	GATCTCTAACAACGGACTGGTGACCCTGCTCTGGTTCCTCCTGCTCCTGG	11	+	58981606-58981655	11q12.1d	Homo sapiens olfactory receptor, family 4, subfamily D, member 6 (OR4D6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-250	OR11-250
Homo sapiens	RefSeq	NM_001008406.1	ILMN_3009	BCAP29	NM_001008406.1	NM_001008406.1		55973	56549094	NM_001008406.1	BCAP29	NP_001008406.1	ILMN_1737380	0006250564	I	2201	TGAGGTCGAGGCCATGCAAAGTGGAGCAACAAGGAGCTGTGTCCCTGACG	7	+	107050770-107050819	7q22.3c	Homo sapiens B-cell receptor-associated protein 29 (BCAP29), transcript variant 3, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BAP29; DKFZp686M2086	DKFZp686M2086; BAP29
Homo sapiens	RefSeq	XM_001723461.1	ILMN_351234	LOC100127887	XM_001723461.1	XM_001723461.1		100127887	169161918	XM_001723461.1	LOC100127887	XP_001723513.1	ILMN_3271785	0000990307	M	160	GTCCCTCAGTAGAGGATGAGATAGCAGGGATTAGGCCACAGTCTCAGATC				1q32.1d	PREDICTED: Homo sapiens hypothetical protein LOC100127887 (LOC100127887), mRNA.					
Homo sapiens	RefSeq	NM_032177.2	ILMN_4659	PHAX	NM_032177.2	NM_032177.2		51808	66392145	NM_032177.2	PHAX	NP_115553.2	ILMN_2190779	0006900014	S	1650	GGCAATTTTAAGGATAAAAACTAACATTGGCCAGGCACGGTGGCTCACGC	5	+	125960979-125961028	5q23.2e	Homo sapiens phosphorylated adaptor for RNA export (PHAX), mRNA.				FLJ13193; PHAX	FLJ13193; PHAX
Homo sapiens	RefSeq	NM_032177.2	ILMN_4659	PHAX	NM_032177.2	NM_032177.2		51808	66392145	NM_032177.2	PHAX	NP_115553.2	ILMN_1728074	0004260364	S	1123	GTCACAGGAAGGACATGCAGAAGCCAAGTTGGAGGCAGAGGAAGCCATTG	5	+	125960452-125960501	5q23.2e	Homo sapiens phosphorylated adaptor for RNA export (PHAX), mRNA.				FLJ13193; PHAX	FLJ13193; PHAX
Homo sapiens	RefSeq	NM_032177.2	ILMN_4659	PHAX	NM_032177.2	NM_032177.2		51808	66392145	NM_032177.2	PHAX	NP_115553.2	ILMN_3237589	0003800040	S	1129	GGAAGGACATGCAGAAGCCAAGTTGGAGGCAGAGGAAGCCATTGAAGTTG	5	+	125960458-125960507	5q23.2e	Homo sapiens phosphorylated adaptor for RNA export (PHAX), mRNA.				FLJ13193; PHAX	FLJ13193; PHAX
Homo sapiens	Unigene	Hs.566647	ILMN_118921	HS.566647	Hs.566647		Hs.566647		6698307	AW291671			ILMN_1846412	0005690379	S	256	CCCCATTCTTATGAGATTAACATTCTAGGCTGGGCGCGGTGACTCATGCC					UI-H-BI2-agn-g-04-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2725039 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001294.1	ILMN_22488	CLPTM1	NM_001294.1	NM_001294.1		1209	4502896	NM_001294.1	CLPTM1	NP_001285.1	ILMN_1665831	0000770168	S	2200	GTTTGTGGAGGCGCTGTCTGTCCCTCTGTCCCTCTGTGTTTCCAGCCATC	19	+	45496330-45496379	19q13.32a	Homo sapiens cleft lip and palate associated transmembrane protein 1 (CLPTM1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9828125] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9218588] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus [goid 33081] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell differentiation in the thymus [goid 33081] [evidence ISS]			
Homo sapiens	RefSeq	NM_001038.4	ILMN_5697	SCNN1A	NM_001038.4	NM_001038.4		6337	47834319	NM_001038.4	SCNN1A	NP_001029.1	ILMN_1713995	0007040487	S	3032	GCGGTCAGGGACTGAATCTTGCCCGTTTATGTATGCTCCATGTCTAGCCC	12	-	6326327-6326376	12p13.31d	Homo sapiens sodium channel, nonvoltage-gated 1 alpha (SCNN1A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 8589714] [evidence TAS]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 8589714] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11244092] [evidence IPI];  [goid 15280] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SCNEA; FLJ21883; ENaCa; SCNN1; ENaCalpha	SCNEA; FLJ21883; ENaCa; SCNN1; ENaCalpha
Homo sapiens	RefSeq	NM_003591.2	ILMN_26940	CUL2	NM_003591.2	NM_003591.2		8453	19482173	NM_003591.2	CUL2	NP_003582.2	ILMN_1669252	0002000193	S	2519	GCAGGACTGTGCCTCCATAATTTGGTCATTTGGCAGCCCCTGTTTTCTGC	10	-	35345181-35345230	10p11.21c	Homo sapiens cullin 2 (CUL2), mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 8681378] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8681378] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8681378] [evidence TAS]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [pmid 8681378] [evidence TAS]	Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12609982] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]	MGC131970	MGC131970
Homo sapiens	RefSeq	XM_926517.1	ILMN_36803	LOC643145	XM_926517.1	XM_926517.1		643145	89037246	XM_926517.1	LOC643145	XP_931610.1	ILMN_1706068	0006110681	S	1	ATGTGGCTGCAGCATGAGCTGTGGTACCCGGTGGCAGAGGCGCTGCTTGG	14	+	20138305-20138354		PREDICTED: Homo sapiens hypothetical protein LOC643145 (LOC643145), mRNA.					
Homo sapiens	RefSeq	NM_197964.3	ILMN_364960	C7ORF55	NM_197964.3	NM_197964.3		154791	188219594	NM_197964.3	C7orf55	NP_932068.2	ILMN_3238680	0005720102	S	333	GGCCTATCGGTACCTTGTGAAGGCTTTCCGTGCACATCGGGTCACCAGTG	7	+	139026229-139026268:139030247-139030256	7q34b	Homo sapiens chromosome 7 open reading frame 55 (C7orf55), nuclear gene encoding mitochondrial protein, mRNA.					
Homo sapiens	RefSeq	XM_940594.1	ILMN_162041	SERHL	XM_001132161.1	XM_001132161.1		94009	113429616	XM_001132161.1	SERHL	XP_001132161.1	ILMN_1801395	0006580184	A	7	ACTGCAGGATACACTCCCCTCCTGCTACCTAGGCAGGCGTGAGGGTGTGA				22q13.2b	PREDICTED: Homo sapiens serine hydrolase-like (SERHL), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	XM_945523.1	ILMN_172205	LOC284821	XR_016232.1	XR_016232.1		284821	113429096	XR_016232.1	LOC284821		ILMN_1680208	0007050661	A	41	CAGGTCCTGGTGCTCGATGGTCGAGGCCATCTCCTGGTCCGCCTGGCGGC	21	+	25656018-25656067	21q21.2b	PREDICTED: Homo sapiens similar to ribosomal protein L13a (LOC284821), mRNA.					
Homo sapiens	Unigene	Hs.573484	ILMN_125665	HS.573484	Hs.573484		Hs.573484		1425717	W95809			ILMN_1893686	0004280753	S	278	GCCACCTGTGAGGAATGTGAGTTGGAGGTCGAGTGTGCTGAGGCAGTGAC	9	+	136325880-136325929		ze07g10.s1 Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone IMAGE:358338 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001718795.1	ILMN_335577	LOC100129448	XM_001718795.1	XM_001718795.1		100129448	169205600	XM_001718795.1	LOC100129448	XP_001718847.1	ILMN_3177250	0006520070	A	398	CAGCAGCTGGGAAGGCGCCCACAGAGCGGGCGCGCCAAGCGGGACGCGGG				12q23.3d	PREDICTED: Homo sapiens hypothetical protein LOC100129448 (LOC100129448), mRNA.					
Homo sapiens	RefSeq	NM_201554.1	ILMN_1914	DGKA	NM_201554.1	NM_201554.1		1606	41872499	NM_201554.1	DGKA	NP_963848.1	ILMN_2319913	0006940088	A	2113	GTACCAGACCTAAGTGACAAGAGACTGGAAGTGGTTGGGCTGGAGGGTGC	12	+	54632977-54632983:54633091-54633133	12q13.2c	Homo sapiens diacylglycerol kinase, alpha 80kDa (DGKA), transcript variant 4, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 2175712] [evidence TAS]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 2175712] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]	MGC42356; DGK-alpha; DAGK1; MGC12821; DAGK	MGC42356; DGK-alpha; DAGK1; MGC12821; DAGK
Homo sapiens	RefSeq	NM_201554.1	ILMN_1914	DGKA	NM_201554.1	NM_201554.1		1606	41872499	NM_201554.1	DGKA	NP_963848.1	ILMN_2319910	0003170020	A	2286	GCAGACGCCCTGTACAATCAAGATCACCCACAAGAACCAGATGCCCATGC	12	+	54633446-54633461:54633736-54633769	12q13.2c	Homo sapiens diacylglycerol kinase, alpha 80kDa (DGKA), transcript variant 4, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 2175712] [evidence TAS]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 2175712] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]	MGC42356; DGK-alpha; DAGK1; MGC12821; DAGK	MGC42356; DGK-alpha; DAGK1; MGC12821; DAGK
Homo sapiens	RefSeq	NM_004664.2	ILMN_24070	LIN7A	NM_004664.2	NM_004664.2		8825	49574521	NM_004664.2	LIN7A	NP_004655.1	ILMN_1806293	0005890075	S	1038	ACCAAGGCAACTCAACACCTTCTTTCTCTGGGCTTGAACCGCCACTGCTC	12	-	81191313-81191362	12q21.31a	Homo sapiens lin-7 homolog A (C. elegans) (LIN7A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9482110] [evidence TAS]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 9753324] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11311936] [evidence IPI]	MGC148143; LIN-7A; VELI1; TIP-33; LIN7; MALS-1	MGC148143; LIN-7A; VELI1; TIP-33; LIN7; MALS-1
Homo sapiens	RefSeq	XM_929812.1	ILMN_35915	LOC646855	XM_929812.1	XM_929812.1		646855	88953696	XM_929812.1	LOC646855	XP_934905.1	ILMN_1738402	0002370619	S	273	CCATGGAGAAGATCTGGACAAGCTCCACAGAGCTGCCTGGTGGGGTAAAG	2	+	132066031-132066080		PREDICTED: Homo sapiens similar to protein expressed in prostate, ovary, testis, and placenta 2 isoform a (LOC646855), mRNA.					
Homo sapiens	Unigene	Hs.513000	ILMN_98387	HS.513000	Hs.513000		Hs.513000		24659826	BC039397			ILMN_1900998	0006770504	S	829	GCCCCAACAATGGGCCTGTCACCTTGCTAGTCATCCATTCTTAATGCCTA	15	-	69902138-69902187		Homo sapiens cDNA clone IMAGE:5299888					
Homo sapiens	RefSeq	NM_003673.2	ILMN_6729	TCAP	NM_003673.2	NM_003673.2		8557	19924299	NM_003673.2	TCAP	NP_003664.1	ILMN_1804316	0004220561	S	753	TCAGCCCCAGGAGAAGGGACAAAAGGTACTGGTGAGGGCAAGAGGTGCCT	17	+	35076123-35076172	17q12c	Homo sapiens titin-cap (telethonin) (TCAP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 17921333] [evidence IDA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9817758] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 17921333] [evidence TAS]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [pmid 17921333] [evidence TAS]; The series of events by which a mechanical stimulus is received by a cell and converted into a molecular signal [goid 50982] [pmid 17921333] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11842093] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10984498] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 9350988] [evidence TAS]	TELE; CMD1N; LGMD2G; telethonin; T-cap	TELE; CMD1N; LGMD2G; telethonin; T-cap
Homo sapiens	RefSeq	XR_041286.1	ILMN_343972	RPL14L	XR_041286.1	XR_041286.1		144581	169204826	XR_041286.1	RPL14L		ILMN_3302177	0002360102	M	208	ACTGATTTCATCCTCAAGTTTCCGCACAGTGCCCGCCAAAAGTATGTCCA				12q14.2a	PREDICTED: Homo sapiens misc_RNA (RPL14L), miscRNA.					
Homo sapiens	RefSeq	XR_041286.1	ILMN_343972	RPL14L	XR_041286.1	XR_041286.1		144581	169204826	XR_041286.1	RPL14L		ILMN_3225591	0004040451	A	522	AAAGATGACGGCCGCGAGTAAAAAGGCTTCAGCCCAGAAGGTTCCTGCCC				12q14.2a	PREDICTED: Homo sapiens misc_RNA (RPL14L), miscRNA.					
Homo sapiens	RefSeq	NM_145333.1	ILMN_7512	MAP3K7	NM_145333.1	NM_145333.1		6885	21735565	NM_145333.1	MAP3K7	NP_663306.1	ILMN_2379326	0000360471	A	1495	CTAGGATCGCCGCAACCACAGGCAACGGACAGCCAAGACGTAGATCCATC	6	-	91302812-91302841:91313698-91313717	6q15e	Homo sapiens mitogen-activated protein kinase kinase kinase 7 (MAP3K7), transcript variant D, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12609980] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9744859] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10066798] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9162092] [evidence EXP]	Any process that activates or increases the frequency, rate, or extent of T cell cytokine production [goid 2726] [pmid 15125833] [evidence IMP]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 9466656] [evidence TAS]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 15125833] [evidence IMP]; Any process that activates or increases the frequency, rate, or extent of interleukin-2 production [goid 32743] [pmid 15125833] [evidence IMP]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [pmid 15125833] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 15125833] [evidence IC ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [pmid 9466656] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15075345] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TAK1; TGF1a	TAK1; TGF1a
Homo sapiens	RefSeq	XM_941409.1	ILMN_308974	SEL1L2	NM_025229.1	NM_025229.1		80343	151301149	NM_025229.1	SEL1L2	NP_079505.1	ILMN_1750018	0005340524	A	2037	CGAGATGGAACTGGCTGAAACTGGACAACACCATTGGACCACACTGGGAC	20	-	13846028-13846077	20p12.1d	Homo sapiens sel-1 suppressor of lin-12-like 2 (C. elegans) (SEL1L2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ22324; dJ631M13.1; DKFZp434C1826; DJ842G6.2; C20orf50	
Homo sapiens	RefSeq	XR_001033.1	ILMN_31294	LOC641365	XR_001033.1	XR_001033.1		641365	88976627	XR_001033.1	LOC641365		ILMN_1765124	0004210402	A	154	GGGGCCACCAGGTTTCAGGAAAGCAGCAATGACCCCTCAGTAATAGTTGG	4	-	139271083-139271132		PREDICTED: Homo sapiens hypothetical protein LOC641365, transcript variant 5 (LOC641365), misc RNA.					
Homo sapiens	RefSeq	XM_001719662.1	ILMN_350878	LOC100131326	XM_001719662.1	XM_001719662.1		100131326	169202880	XM_001719662.1	LOC100131326	XP_001719714.1	ILMN_3294071	0002030239	M	233	CACAGTACACCTGCTTTACGGATGTCCAAGCCTCCTCCATGGACCTACCC				11q12.2b	PREDICTED: Homo sapiens hypothetical LOC100131326 (LOC100131326), mRNA.					
Homo sapiens	RefSeq	XM_933803.1	ILMN_180557	LOC729966	XM_001131914.1	XM_001131914.1		729966	113428149	XM_001131914.1	LOC729966	XP_001131914.1	ILMN_1793367	0002350075	S	289	ACTTCCCACAGCCCCGGAACGGAGCCCTTGACCTCCACTGACCAGACCTT	19	-	18223890-18223939	19p13.11c	PREDICTED: Homo sapiens similar to hCG2001482 (LOC729966), mRNA.					
Homo sapiens	RefSeq	NM_019119.3	ILMN_23442	PCDHB9	NM_019119.3	NM_019119.3		56127	14600335	NM_019119.3	PCDHB9	NP_061992.2	ILMN_2047885	0007210156	S	3858	CCCAGGAGGTGGAAGTTGCTTTGAGCCGAGATTGCACCATTGTACTCCAG	5	+	140550934-140550983	5q31.3b	Homo sapiens protocadherin beta 9 (PCDHB9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11322959] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 12231349] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 12231349] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11322959] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11322959] [evidence NAS]	PCDH-BETA9; MGC119556; MGC119555; PCDH3H	PCDH-BETA9; MGC119556; MGC119555; PCDH3H
Homo sapiens	RefSeq	NM_019119.3	ILMN_23442	PCDHB9	NM_019119.3	NM_019119.3		56127	14600335	NM_019119.3	PCDHB9	NP_061992.2	ILMN_1769859	0001770735	S	3464	AGCCCAGTGCCATCCAGTTGAAAAAACAACAGCAATCACAAAGTAGAGGT	5	+	140550540-140550589	5q31.3b	Homo sapiens protocadherin beta 9 (PCDHB9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11322959] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 12231349] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 12231349] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11322959] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11322959] [evidence NAS]	PCDH-BETA9; MGC119556; MGC119555; PCDH3H	PCDH-BETA9; MGC119556; MGC119555; PCDH3H
Homo sapiens	RefSeq	XM_372705.2	ILMN_30804	LOC390877	XM_372705.2	XM_372705.2		390877	89050914	XM_372705.2	LOC390877	XP_372705.2	ILMN_1800875	0006840019	A	499	GCCTTGGCTCACATCCCGGCAGAAGCAGCACCAGAGAACATCTTTGCCAA	19	+	6363075-6363086:6363281-6363318	19p13.3a	PREDICTED: Homo sapiens similar to adenylate kinase 5 (LOC390877), mRNA.					
Homo sapiens	Unigene	Hs.550282	ILMN_110253	HS.550282	Hs.550282		Hs.550282		52641593	CV318379			ILMN_1874589	0002810279	S	109	CCTCACCGCCTCCCAGCATTACAGGAAATCATCAGGGCTCCCCTACTCAG	12	-	106287725-106287774		CM2-HT0671-010600-214-d03 HT0671 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_033504.2	ILMN_14470	TMEM54	NM_033504.2	NM_033504.2		113452	34147466	NM_033504.2	TMEM54	NP_277039.1	ILMN_2059689	0004890563	S	771	TCTGACCCTCTGAGAGATGATGTCCTGCCCAGGCCCGATGGCCACTAGGA	1	-	33360368-33360405:33360406-33360417	1p35.1b	Homo sapiens transmembrane protein 54 (TMEM54), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 9500206] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 9500206] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 9500206] [evidence ND ]	BCLP; CAC1; MGC10137; CAC-1	BCLP; CAC1; MGC10137; CAC-1
Homo sapiens	RefSeq	NM_024798.2	ILMN_10699	SNX22	NM_024798.2	NM_024798.2		79856	71772837	NM_024798.2	SNX22	NP_079074.2	ILMN_2080760	0005360338	S	3476	GACACAGGCATAGCTGCAGAGGAGAAAGCAGCCAGAGATGTGTGGGGAGG	15	+	62236595-62236644	15q22.31a	Homo sapiens sorting nexin 22 (SNX22), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	FLJ13952	FLJ13952
Homo sapiens	RefSeq	NM_145285.1	ILMN_27705	NKX2-3	NM_145285.2	NM_145285.2		159296	148746210	NM_145285.2	NKX2-3	NP_660328.2	ILMN_1796089	0005360246	S	1846	GATTGTCGGGGGACGCAGGACTCTTCGAGGAAAACCAGCCGAATGAGATC	10	+	101286020-101286069	10q24.2c	Homo sapiens NK2 transcription factor related, locus 3 (Drosophila) (NKX2-3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	CSX3; NKX2C; NKX2.3; NKX4-3	NKX2.3; NKX2C
Homo sapiens	RefSeq	NM_004112.2	ILMN_8195	FGF11	NM_004112.2	NM_004112.2		2256	38683846	NM_004112.2	FGF11	NP_004103.1	ILMN_1719938	0005900025	S	2598	AGGAGTAGATGCCCCCTCACCCACACAAACCCCACTCAGTCTCCACCCAA	17	+	7288858-7288907	17p13.1d	Homo sapiens fibroblast growth factor 11 (FGF11), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8790420] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8790420] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8790420] [evidence TAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8790420] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	FLJ16061; MGC45269; MGC102953; FHF3	FLJ16061; MGC45269; MGC102953; FHF3
Homo sapiens	RefSeq	XR_018556.2	ILMN_168376	LOC644879	XR_018556.2	XR_018556.2		644879	169166828	XR_018556.2	LOC644879		ILMN_3282768	0003870452	M	526	AAGAAGTGAGGGTCCCCGACCCAGGAGAACGGTGGTTCCCACAGGACAAT				4q31.1c	PREDICTED: Homo sapiens misc_RNA (LOC644879), miscRNA.					
Homo sapiens	RefSeq	NM_052885.1	ILMN_26745	SLC2A13	NM_052885.1	NM_052885.1		114134	16418394	NM_052885.1	SLC2A13	NP_443117.1	ILMN_1741502	0000540722	S	2523	CCAAAGTGCCTCCTACAAGGGCACAGCTGTCCGTATCTCCTTTGGATTCC	12	-	38439520-38439569	12q12b-q12c	Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 13 (SLC2A13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	HMIT; MGC48624	HMIT; MGC48624
Homo sapiens	RefSeq	NM_006750.2	ILMN_11888	SNTB2	NM_006750.2	NM_006750.2		6645	18860911	NM_006750.2	SNTB2	NP_006741.1	ILMN_1808374	0001240750	A	1528	TTGGTGGTCCCGAGGGAGAACTGACCATGGACCTGCACTCTTGTCCGAAG	16	+	67891156-67891178:67892236-67892262	16q22.1d	Homo sapiens syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) (SNTB2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8576247] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 8576247] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	EST25263; D16S2531E; SNT2B2; SNT3; SNTL	EST25263; D16S2531E; SNT2B2; SNT3; SNTL
Homo sapiens	RefSeq	NM_033195.1	ILMN_11940	LDHAL6B	NM_033195.1	NM_033195.1		92483	15082233	NM_033195.1	LDHAL6B	NP_149972.1	ILMN_1719788	0005340671	S	914	TCCTGAGCAATGGAAAAATGTCCACAAAGAAGTGACTGCAACTGCCTATG	15	+	57287247-57287296	15q22.2a	Homo sapiens lactate dehydrogenase A-like 6B (LDHAL6B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	 [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12107167] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	LDHL; LDHAL6	LDHL; LDHAL6
Homo sapiens	RefSeq	NM_033195.1	ILMN_11940	LDHAL6B	NM_033195.1	NM_033195.1		92483	15082233	NM_033195.1	LDHAL6B	NP_149972.1	ILMN_2151698	0003800400	S	1382	CCTCCAGCTCTTTTATTGAGCATCCACGTGCTGGACGATACTTATTTACA	15	+	57287715-57287764	15q22.2a	Homo sapiens lactate dehydrogenase A-like 6B (LDHAL6B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	 [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12107167] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	LDHL; LDHAL6	LDHL; LDHAL6
Homo sapiens	RefSeq	NM_014106.2	ILMN_12780	ZNF770	NM_014106.2	NM_014106.2		54989	46094071	NM_014106.2	ZNF770	NP_054825.2	ILMN_1734254	0002070747	S	4952	GGGGGACGGTCCAGGAACCAATACCCCATGGATACCAAGGGACAACTGTA	15	-	35270945-35270994	15q14b	Homo sapiens zinc finger protein 770 (ZNF770), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20582; PRO1914	FLJ20582; PRO1914
Homo sapiens	Unigene	Hs.561365	ILMN_114822	HS.561365	Hs.561365		Hs.561365		23682318	BU741055			ILMN_1856775	0002490025	S	145	GATGGCTGCGGAGAGAGAGGGGTGTAGAAATGTGGGATCCTTGCACCCTG	5	-	134867578-134867627		UI-E-EJ0-aiq-j-21-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-aiq-j-21-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_940286.1	ILMN_37498	LOC651158	XM_940286.1	XM_940286.1		651158	89059337	XM_940286.1	LOC651158	XP_945379.1	ILMN_1704133	0003390239	S	467	TGCAAGGGACAGCGTGAAAACTACCCATCTCCGGTCACCAAGTTGCAGGA				22q13.1c	PREDICTED: Homo sapiens similar to apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F isoform a (LOC651158), mRNA.					
Homo sapiens	RefSeq	XM_926857.1	ILMN_46934	LOC648399	XM_937448.1	XM_937448.1		648399	89060734	XM_937448.1	LOC648399	XP_942541.1	ILMN_1700880	0006280521	S	32	CAACGCATGGTGACATCATCAGGTTTGCGCCTCCACTGGTGATCAAGGAG					PREDICTED: Homo sapiens similar to Ornithine aminotransferase, mitochondrial precursor (Ornithine--oxo-acid aminotransferase) (LOC648399), mRNA.					
Homo sapiens	RefSeq	XM_001714574.1	ILMN_339648	LOC100128064	XM_001714574.1	XM_001714574.1		100128064	169178064	XM_001714574.1	LOC100128064	XP_001714626.1	ILMN_3182034	0003850725	A	658	CATCTACATTCAGAGGGAAGCTGAGCAAACTGGCTCCTGCCCACACTGGA				9q33.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128064 (LOC100128064), mRNA.					
Homo sapiens	Unigene	Hs.550310	ILMN_110260	HS.550310	Hs.550310		Hs.550310		12520285	BG056124			ILMN_1907100	0001510129	S	69	GAGCTGCAAGTTGATGAGGGGAGAGTGGGCAGGGGGAGGTGCTGTATGTG	15	-	72257335-72257384		naf63d01.x1 NCI_CGAP_Brn66 Homo sapiens cDNA clone IMAGE:4168729 3, mRNA sequence					
Homo sapiens	RefSeq	NM_024503.1	ILMN_19427	HIVEP3	NM_024503.1	NM_024503.1		59269	13375633	NM_024503.1	HIVEP3	NP_078779.1	ILMN_1751596	0004480768	S	8377	TATGGTTTTGGGGAAAGGCTGATGGTGAAGCCTCCTGACCCTCCCCGCTG	1	-	41748389-41748438	1p34.2c-p34.2b	Homo sapiens human immunodeficiency virus type I enhancer binding protein 3 (HIVEP3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 15790681] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 15790681] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1555; KRC; ZAS3; KBP1; KBP-1	KRC; KBP-1; KIAA1555; ZAS3; KBP1
Homo sapiens	RefSeq	NM_016653.1	ILMN_5546	ZAK	NM_016653.2	NM_016653.2		51776	82880647	NM_016653.2	ZAK	NP_057737.2	ILMN_1698803	0003360431	A	1138	GACGTTTAAAGATGTGGGAGCAAAAGCTGACAGAGCAGTCCAACACCCCG	2	+	173790175-173790224	2q31.1e	Homo sapiens sterile alpha motif and leucine zipper containing kinase AZK (ZAK), transcript variant 1, mRNA.				AZK; MLT; MRK; mlklak; MLK7; MLTK	mlklak; MLTK
Homo sapiens	RefSeq	NM_018185.2	ILMN_10591	DCUN1D2	NM_018185.2	NM_018185.2		55208	62122944	NM_018185.2	DCUN1D2	NP_060655.1	ILMN_1697031	0004070487	I	661	AAGCAGGACAAGACTAATCATCTTCTTAGCATTTTACTGCGGGTCCCATC	13	-	113165056-113165105	13q34d	Homo sapiens DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae) (DCUN1D2), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		C13orf17; FLJ20092; FLJ10704	C13orf17; FLJ20092; FLJ10704
Homo sapiens	RefSeq	NM_001011670.1	ILMN_27243	CHCHD7	NM_001011670.1	NM_001011670.1		79145	58761517	NM_001011670.1	CHCHD7	NP_001011670.1	ILMN_2324375	0003850180	A	761	GCAAGAGTGTGAGGCAAGAGAAGCTGGAACCACATTCAGAGAGTATCCTG	8	+	57130355-57130404	8q12.1b	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 7 (CHCHD7), transcript variant 5, mRNA.				FLJ40966; MGC2217	FLJ40966; MGC2217
Homo sapiens	RefSeq	NR_030353.1	ILMN_388113	MIR623	NR_030353.1	NR_030353.1		693208	262206109	NR_030353.1	MIR623		ILMN_3310588	0005820437	S	32	TTGGGTTGCATCCTAAGCTGTGCTGGAGCTTCCCGATGTACTCTGTAGAT				13q32.3a	Homo sapiens microRNA 623 (MIR623), microRNA.					
Homo sapiens	RefSeq	NM_024918.2	ILMN_3834	DSN1	NM_024918.2	NM_024918.2		79980	31542256	NM_024918.2	DSN1	NP_079194.2	ILMN_1715905	0003190102	S	1748	GCATGGCTCTGAAGGTGATTTTAGGTAGAAGAGTTTTGAGGCTGGGCGCA	20	-	34814159-34814208	20q11.23a	Homo sapiens DSN1, MIND kinetochore complex component, homolog (S. cerevisiae) (DSN1), mRNA.	A multiprotein kinetochore subcomplex that binds to centromeric chromatin and forms part of the inner kinetochore. It helps to recruit outer kinetochore subunits that will bind to microtubules. In humans, it consists of MIS12, DSN1, NSL1 and PMF1 [goid 444] [pmid 16585270] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15502821] [evidence IPI]	FLJ13346; dJ469A13.2; MIS13; C20orf172; MGC32987	FLJ13346; dJ469A13.2; MIS13; C20orf172; MGC32987
Homo sapiens	RefSeq	NM_001013663.1	ILMN_16201	C2ORF79	NM_001013663.1	NM_001013663.1		391356	61966780	NM_001013663.1	C2orf79	NP_001013685.1	ILMN_1692707	0003170725	S	366	CTCCGGCCCTACCCCAAGGAAGAAGTGGGCCAGTATTTGAAGAAGTTCCG	2	-	25013292-25013341	2p23.3c	Homo sapiens chromosome 2 open reading frame 79 (C2orf79), mRNA.					
Homo sapiens	RefSeq	NM_198267.1	ILMN_23155	ING3	NM_198267.1	NM_198267.1		54556	38201658	NM_198267.1	ING3	NP_938008.1	ILMN_2381603	0001240050	A	195	CGCTTCACGGAAATGCGCGAGATGGACCTGCAGGTGCAGAATGCAATGGA	7	+	120378486-120378525:120380594-120380603	7q31.31d	Homo sapiens inhibitor of growth family, member 3 (ING3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20089; p47ING3; ING2; Eaf4	FLJ20089; p47ING3; ING2; Eaf4
Homo sapiens	RefSeq	NM_198267.1	ILMN_23155	ING3	NM_198267.1	NM_198267.1		54556	38201658	NM_198267.1	ING3	NP_938008.1	ILMN_1783170	0005570204	I	873	GACACTGCCTAAAGATAGGTAGAATAGGCTGTAGCTTGATTTACTGTGGA	7	+	120383921-120383970	7q31.31d	Homo sapiens inhibitor of growth family, member 3 (ING3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20089; p47ING3; ING2; Eaf4	FLJ20089; p47ING3; ING2; Eaf4
Homo sapiens	RefSeq	NM_015472.3	ILMN_24248	WWTR1	NM_015472.3	NM_015472.3		25937	34147583	NM_015472.3	WWTR1	NP_056287.1	ILMN_1787115	0001110730	S	1647	CTGCAAGCCTGCGTTCTTGTGACAGATTATACAGAATTGTGTCTGCAGGA	3	-	150721022-150721071	3q25.1a	Homo sapiens WW domain containing transcription regulator 1 (WWTR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11118213] [evidence NAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11118213] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of adipocyte differentiation [goid 45599] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 11118213] [evidence NAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	TAZ; DKFZP586I1419	TAZ; DKFZP586I1419
Homo sapiens	RefSeq	NM_018361.2	ILMN_9737	AGPAT5	NM_018361.2	NM_018361.2		55326	61743951	NM_018361.2	AGPAT5	NP_060831.2	ILMN_1662049	0000830719	S	2396	TAGTGTGGTGGATTCCCACTGGGCTCTGGTCCTTCCCTTGGATCCCGTCA	8	+	6603306-6603355	8p23.1f	Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) (AGPAT5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11487472] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [pmid 15367102] [evidence NAS]	Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [pmid 15367102] [evidence NAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol [goid 46027] [pmid 11487472] [evidence EXP]	1-AGPAT5; LPAAT-epsilon; LPAAT-e	1-AGPAT5; LPAAT-epsilon; LPAAT-e
Homo sapiens	RefSeq	XM_943154.1	ILMN_138625	BZW1	XM_943154.1	XM_943154.1		9689	88958970	XM_943154.1	BZW1	XP_948247.1	ILMN_1730285	0000830725	I	3	GGGTTTCTTGTAGAGAGAAATGCACATTTTGACGTACATTTGATTCAAGT				2q33.1e	PREDICTED: Homo sapiens basic leucine zipper and W2 domains 1, transcript variant 5 (BZW1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10942595] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_005362.3	ILMN_161972	MAGEA3	NM_005362.3	NM_005362.3		4102	29029622	NM_005362.3	MAGEA3	NP_005353.1	ILMN_2153572	0002450259	S	1677	TGAGAATGCAAGCGAAATTAAATCTGAATAAATAATTCTTCCTCTTCAAA	X	-	151688894-151688896:151934652-151934698	Xq28e	Homo sapiens melanoma antigen family A, 3 (MAGEA3), mRNA.				HYPD; HIP8; MAGEA6; MAGE3; MGC14613	HIP8; MAGE3; MGC14613; HYPD; MAGEA6
Homo sapiens	RefSeq	NM_005362.3	ILMN_161972	MAGEA3	NM_005362.3	NM_005362.3		4102	29029622	NM_005362.3	MAGEA3	NP_005353.1	ILMN_1652276	0001990039	S	1117	CCCTGCATGAGTGGGTTTTGAGAGAGGGGGAAGAGTGAGTCTGAGCACGA	X	-	151935209-151935221:151935222-151935258	Xq28e	Homo sapiens melanoma antigen family A, 3 (MAGEA3), mRNA.				HYPD; HIP8; MAGEA6; MAGE3; MGC14613	HIP8; MAGE3; MGC14613; HYPD; MAGEA6
Homo sapiens	RefSeq	NM_005325.2	ILMN_4959	HIST1H1A	NM_005325.2	NM_005325.2		3024	21264571	NM_005325.2	HIST1H1A	NP_005316.1	ILMN_1692831	0000070292	S	61	CTGAAACAGTGCCTCCCGCCCCCGCCGCTTCTGCTGCTCCTGAGAAACCT	6	-	26125885-26125934	6p22.1d	Homo sapiens histone 1, H1a (HIST1H1A), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 7989039] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	HIST1; H1F1; H1.1; MGC126642	HIST1; H1F1; H1.1; MGC126642
Homo sapiens	RefSeq	NM_012328.1	ILMN_14354	DNAJB9	NM_012328.1	NM_012328.1		4189	9558754	NM_012328.1	DNAJB9	NP_036460.1	ILMN_1773742	0002760164	S	2167	GGAGCAAGTGTTCCTGCTGCCAGTTCTTTCCTCTTTAGGCGTGGTTGAGA	7	+	108002326-108002375	7q31.1a	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 9 (DNAJB9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Modulates the activity of a molecular chaperone [goid 30188] [evidence ISS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	MSTP049; MDG1; DKFZP564F1862; MST049; ERdj4	MSTP049; MDG1; DKFZP564F1862; MST049; ERdj4
Homo sapiens	RefSeq	NM_144622.1	ILMN_19963	DCST2	NM_144622.2	NM_144622.2		127579	109240535	NM_144622.2	DCST2	NP_653223.2	ILMN_1793123	0005860553	S	2086	CAGCTCAAAGGAAGGACCCTGAGCAGGCATGGTTATTGCAGCAACAGCTC	1	-	154995642-154995691	1q21.3e	Homo sapiens DC-STAMP domain containing 2 (DCST2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ32934; RP11-307C12.4	FLJ32934; RP11-307C12.4
Homo sapiens	Unigene	Hs.442504	ILMN_92438	HS.442504	Hs.442504		Hs.442504		24038903	BU853937			ILMN_1825880	0001440519	S	255	AGTGCGCCCTCCAGGCATTCTCTGCTCCTGACTTCCATGGACTGCTAGTG	1	-	173389450-173389499		AGENCOURT_10407585 NIH_MGC_82 Homo sapiens cDNA clone IMAGE:6620990 5, mRNA sequence					
Homo sapiens	RefSeq	NM_207468.1	ILMN_18715	FAM177B	NM_207468.2	NM_207468.2		400823	125346183	NM_207468.2	FAM177B	NP_997351.2	ILMN_1770576	0000050647	S	995	CTCCACCCCTGTGATACAAGTCCCATGAGTACTGACATTTGCACAGTAGC	1	+	220990275-220990324	1q41e	Homo sapiens family with sequence similarity 177, member B (FAM177B), mRNA.					
Homo sapiens	RefSeq	NM_001008395.1	ILMN_17527	C7ORF59	NM_001008395.2	NM_001008395.2		389541	148806921	NM_001008395.2	C7orf59	NP_001008396.1	ILMN_1779735	0004590615	S	321	TGTGGTGAAGAGGCAGAACCGAGGTCGGGAGCCCATTGATGTCTGAGCCT	7	+	99589478-99589523:99589524-99589527	7q22.1c	Homo sapiens chromosome 7 open reading frame 59 (C7orf59), mRNA.				MGC163425; MGC163431	MGC163425; MGC163431
Homo sapiens	RefSeq	NR_024433.1	ILMN_370007	LOC283663	NR_024433.1	NR_024433.1		283663	212549579	NR_024433.1	LOC283663		ILMN_3236036	0007570184	S	2263	GACCGTCGTGCCCCTCATCAAGGAAGAGCCAAGGACCCCAAGGAGAAGAA	15	+	57599219-57599266:57599762-57599763	15q21.3d	Homo sapiens hypothetical LOC283663 (LOC283663), non-coding RNA.					
Homo sapiens	RefSeq	NR_002916.2	ILMN_366693	SNORD8	NR_002916.2	NR_002916.2		319103	194595483	NR_002916.2	SNORD8		ILMN_3248874	0000540520	S	32	GCCACCAGGTAGGGCAGTGTTGCCCTGGTTTGGGTGCCAGTGAGTTTAAC	14	-	21865479-21865528	14q11.2c	Homo sapiens small nucleolar RNA, C/D box 8 (SNORD8), small nucleolar RNA.					
Homo sapiens	RefSeq	NM_001109.2	ILMN_174166	ADAM8	NM_001109.3	NM_001109.3		101	89363018	NM_001109.3	ADAM8	NP_001100.2	ILMN_1708348	0000780725	S	2940	GCATCCCCAGAAAGACTCCATCCCAGGACCAGGTTCCCCTGCGTGCTCTT	10	-	134926186-134926235	10q26.3f	Homo sapiens ADAM metallopeptidase domain 8 (ADAM8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9126482] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MS2; CD156; MGC134985	MS2; CD156
Homo sapiens	RefSeq	NM_006611.1	ILMN_23103	KLRA1	NM_006611.2	NM_006611.2		10748	115292441	NM_006611.2	KLRA1	NP_006602.2	ILMN_1795431	0004810427	S	1239	GTATCTGTGGGAAGAGAATAGACTCTATTTTCTCTGATTCGGTGTGCGCC	12	-	10633263-10633312	12p13.2c	Homo sapiens killer cell lectin-like receptor subfamily A, member 1 (KLRA1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9645365] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9645365] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9645365] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 9645365] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	LY49L; Ly-49L; KLRA#; MGC126522; Ly49; MGC126520	LY49L; Ly-49L; KLRA#; Ly49
Homo sapiens	RefSeq	XM_940546.1	ILMN_174746	C15ORF44	XM_001131371.1	XM_001131371.1		81556	113425683	XM_001131371.1	C15orf44	XP_001131371.1	ILMN_1724016	0004920286	I	59	GACGGAAAGTTTATGCCGACGGAAAGTTTATGCCGACGGACTGTGTCCGG				15q22.31b	PREDICTED: Homo sapiens chromosome 15 open reading frame 44 (C15orf44), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]				
Homo sapiens	RefSeq	XM_942461.1	ILMN_37053	LOC652800	XM_942461.1	XM_942461.1		652800	89064529	XM_942461.1	LOC652800	XP_947554.1	ILMN_1748294	0007000564	S	1861	ATCCCAAAGTCATCTGCACTCGTCATACCGGAGTTTGCCGAGGCCCAGTA					PREDICTED: Homo sapiens similar to neuron navigator 2 isoform 2 (LOC652800), mRNA.					
Homo sapiens	RefSeq	NM_032328.1	ILMN_24506	EFCAB2	NM_032328.2	NM_032328.2		84288	142369203	NM_032328.2	EFCAB2	NP_115704.1	ILMN_1694068	0005860524	S	877	GCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGAAGGCTTCTTTT	1	+	243317644-243317693	1q44b	Homo sapiens EF-hand calcium binding domain 2 (EFCAB2), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ33608; RP11-290P14.1; MGC12458	FLJ33608; RP11-290P14.1; MGC12458
Homo sapiens	Unigene	Hs.127100	ILMN_76377	HS.127100	Hs.127100		Hs.127100		51471275	XM_498553			ILMN_1874577	0002570647	S	1497	CTTACCTGTGTGGCTTGGTATTGTGGTGGGTTTTCAGCTTCTTCTCCACC					PREDICTED: Homo sapiens hypothetical gene supported by BC037858 (LOC440117), mRNA					
Homo sapiens	RefSeq	XR_001380.1	ILMN_164907	LOC376693	XR_017819.1	XR_017819.1		376693	113412550	XR_017819.1	LOC376693		ILMN_1805348	0006330598	A	720	GAAGAGTGCAGTGAGGTGCCTCAGCATGAGAAAAGTAAGTGCGCCACGGC				1q32.1c	PREDICTED: Homo sapiens hypothetical LOC376693 (LOC376693), misc RNA.					
Homo sapiens	RefSeq	XM_930127.1	ILMN_175272	LOC730196	XR_015841.1	XR_015841.1		730196	113426044	XR_015841.1	LOC730196		ILMN_1680929	0000830014	S	469	CTACATGCTCCCAGATACATCAGGTCCTTCAACATCCTGGTCCTGTGCTG	16	+	31465988-31466037	16p11.2c	PREDICTED: Homo sapiens misc_RNA (LOC730196), miscRNA.					
Homo sapiens	RefSeq	XM_939628.1	ILMN_31338	LOC650538	XM_939628.1	XM_939628.1		650538	89041120	XM_939628.1	LOC650538	XP_944721.1	ILMN_1790789	0006980324	S	479	AGACCTTGGGCACACTGGGGGTCTACCAGCCTTCACAGACCTCGGGCACA					PREDICTED: Homo sapiens similar to WD repeat domain 33 (LOC650538), mRNA.					
Homo sapiens	RefSeq	NM_007125.3	ILMN_163189	UTY	NM_007125.3	NM_007125.3		7404	33188430	NM_007125.3	UTY	NP_009056.3	ILMN_1739587	0003840561	I	6354	GCTATACTGTCCTGCTTGTACAACATGGTTTGGGGTGAAGGGGAGGAAAG	Y	-	15360381-15360430	Yq11.21b	Homo sapiens ubiquitously transcribed tetratricopeptide repeat gene, Y-linked (UTY), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	UTY1; DKFZp686L12190	UTY1; DKFZp686L12190
Homo sapiens	RefSeq	XM_496041.3	ILMN_178856	LOC440243	XM_496041.3	XM_496041.3		440243	113425084	XM_496041.3	LOC440243	XP_496041.4	ILMN_3241535	0007560743	S	593	GATAGGTACATTGAGGAGTTAACAAAGGAGAGGGACGCCCTGAGTCTGGA	15	-	21125887-21125931:21127309-21127313	15q11.2c	PREDICTED: Homo sapiens hypothetical LOC440243 (LOC440243), mRNA.					
Homo sapiens	RefSeq	NM_022764.1	ILMN_23689	MTHFSD	NM_022764.2	NM_022764.2		64779	116875837	NM_022764.2	MTHFSD	NP_073601.2	ILMN_1797046	0000050681	S	1896	GGAGAATGGGTTTCATCCCAGCCTACGTCACATTTGCCCAGTGCCTTATG	16	-	86564871-86564920	16q24.1c	Homo sapiens methenyltetrahydrofolate synthetase domain containing (MTHFSD), transcript variant 3, mRNA.		The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate [goid 30272] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 5-formyltetrahydrofolate = ADP + phosphate + 5,10-methenyltetrahydrofolate [goid 30272] [evidence IEA]	FLJ12998; MGC138264; FLJ13893; MGC138262	FLJ13893
Homo sapiens	RefSeq	NM_024680.2	ILMN_24725	E2F8	NM_024680.2	NM_024680.2		79733	38505225	NM_024680.2	E2F8	NP_078956.2	ILMN_1811006	0003800608	S	2822	CTGTTAATGTCGCACCAGAAAATGCAGGCACTCAGCAAGGAAGGGCCACC	11	-	19246839-19246888	11p15.1c	Homo sapiens E2F transcription factor 8 (E2F8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	FLJ23311	FLJ23311
Homo sapiens	RefSeq	NM_003041.1	ILMN_17020	SLC5A2	NM_003041.1	NM_003041.1		6524	4507032	NM_003041.1	SLC5A2	NP_003032.1	ILMN_2070102	0001230170	S	1514	ACGCCTGATTCCCGAGTTCTCCTTCGGCTCGGGCAGCTGTGTGCAGCCCT	16	+	31407990-31408039	16p11.2c	Homo sapiens solute carrier family 5 (sodium/glucose cotransporter), member 2 (SLC5A2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8244402] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 8244402] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + Na+(out) = glucose(in) + Na+(in). In low affinity transport the transporter is able to bind the solute only if it is present at very high concentrations [goid 5362] [pmid 8244402] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	SGLT2	SGLT2
Homo sapiens	RefSeq	NM_138706.2	ILMN_24846	B3GN-T6	NM_138706.2	NM_138706.2		192134	47271458	NM_138706.2	B3Gn-T6	NP_619651.2	ILMN_1680081	0002850041	S	2051	TTCCGGGGAGTCCGAAGTGGAGAAAGGCTGGTGGGAACATGGAGGCCAGT	11	+	76430231-76430280	11q13.5c	Homo sapiens beta-1,3-N-acetylglucosaminyltransferase protein (B3Gn-T6), mRNA.				MGC119336; IMAGE:4907098; MGC119337; MGC119334	MGC119336; IMAGE:4907098; MGC119337; MGC119334
Homo sapiens	RefSeq	NM_002834.3	ILMN_17352	PTPN11	NM_002834.3	NM_002834.3		5781	33356176	NM_002834.3	PTPN11	NP_002825.3	ILMN_1778236	0002030523	S	6152	GTCTCCCCACCTATATTTATGGGTGTTAGCGCAACTGCTTTGCTAGTTGC	12	+	111431969-111432018	12q24.13a	Homo sapiens protein tyrosine phosphatase, non-receptor type 11 (PTPN11), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9054388] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14560030] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15574420] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14665621] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10734310] [evidence EXP]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction [goid 9967] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; Any process that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size [goid 40014] [evidence IEA]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of insulin [goid 46676] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of proteins from the nucleus to the cytoplasm [goid 46825] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [evidence IEA]; The series of molecular signals generated as a consequence of the nerve growth factor receptor binding to one of its physiological ligands [goid 48011] [evidence IEA]; The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs [goid 48609] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cortisol from a cell or group of cells [goid 51463] [evidence IEA]; Any process that decreases or stops the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60125] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10209036] [evidence IPI];  [goid 4726] [pmid 15574420] [evidence EXP];  [goid 4726] [pmid 14560030] [evidence EXP];  [goid 4726] [pmid 7681589] [evidence TAS];  [goid 4726] [pmid 10734310] [evidence EXP];  [goid 4726] [pmid 14665621] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9658397] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9792637] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a receptor for peptide hormones [goid 51428] [evidence IEA]	SH-PTP2; PTP2C; BPTP3; SHP2; SH-PTP3; MGC14433; PTP-1D; CFC; NS1	SH-PTP2; PTP2C; BPTP3; SHP2; SH-PTP3; MGC14433; PTP-1D; CFC; NS1
Homo sapiens	RefSeq	XM_942638.1	ILMN_38257	LOC652905	XM_942638.1	XM_942638.1		652905	89065383	XM_942638.1	LOC652905	XP_947731.1	ILMN_1759063	0002190592	S	142	ATCACGGGGTACCGAACCGCTTACAGGAGCTCAACCTGGTGGTTCAGTCT					PREDICTED: Homo sapiens similar to nodal modulator 2 isoform 2 (LOC652905), mRNA.					
Homo sapiens	RefSeq	NM_018715.1	ILMN_2123	RCC2	NM_018715.1	NM_018715.1		55920	29789089	NM_018715.1	RCC2	NP_061185.1	ILMN_1720124	0001340360	S	3920	GTTGGGAATGTGCTTGGCGCTGACCCTGCGGGCATCTGACTGGTCTTCCA	1	-	17605960-17606009	1p36.13d	Homo sapiens regulator of chromosome condensation 2 (RCC2), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]		DKFZp762N0610; KIAA1470; TD-60	DKFZp762N0610; KIAA1470; TD-60
Homo sapiens	Unigene	Hs.564658	ILMN_117282	HS.564658	Hs.564658		Hs.564658		18971242	BM664830			ILMN_1843804	0000270369	S	451	CAGACTGGGTCCAACTTGACTCCACCACTCACTTGCTGTGTGACTTTGGG	14	+	80705480-80705529		UI-E-CQ1-aey-a-24-0-UI.s1 UI-E-CQ1 Homo sapiens cDNA clone UI-E-CQ1-aey-a-24-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XR_041850.1	ILMN_353197	LOC641298	XR_041850.1	XR_041850.1		641298	169209895	XR_041850.1	LOC641298		ILMN_3249624	0002810670	S	4993	CTGGTTGGGGAGGACCAGAAATCAGGTTATCAATACTCTGGCTGACCATC	16	+	22438212-22438236:22442642-22442666	16p12.1c	PREDICTED: Homo sapiens misc_RNA (LOC641298), miscRNA.					
Homo sapiens	RefSeq	XM_927548.1	ILMN_34415	LOC644402	XM_927548.1	XM_927548.1		644402	89059716	XM_927548.1	LOC644402	XP_932641.1	ILMN_1674187	0003840195	S	1	ATGGATCCACCACAGAGAGTCACTCCAACTTTGAATTCTGATTCATCTCT	X	+	52086050-52086099	Xp11.22b	PREDICTED: Homo sapiens hypothetical LOC644402 (LOC644402), mRNA.					
Homo sapiens	RefSeq	NM_198559.1	ILMN_28472	C2ORF62	NM_198559.1	NM_198559.1		375307	38348395	NM_198559.1	C2orf62	NP_940961.1	ILMN_1776122	0002680564	S	988	AGCACCCCGAAGCCCACGCGCTCATCTCCGACTTCCTGCTCTTCCTGCTG	2	+	218940726-218940775	2q35e	Homo sapiens chromosome 2 open reading frame 62 (C2orf62), mRNA.				MGC50811	MGC50811
Homo sapiens	Unigene	Hs.583147	ILMN_135328	HS.583147	Hs.583147		Hs.583147		83149246	DB338144			ILMN_1896653	0001410634	S	148	GAGGGGAATTGGGGAACTCATCTTTTTATCAGGAACTCACTCCCTGGCTG	7	-	117113898-117113947		DB338144 TESTI2 Homo sapiens cDNA clone TESTI2033339 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014230.2	ILMN_3701	SRP68	NM_014230.2	NM_014230.2		6730	24497619	NM_014230.2	SRP68	NP_055045.2	ILMN_1703524	0001340750	S	2205	GCCTTTGGTCAGTAATGCGTTCAGGAGTCCACACCAGGCACAGATGGGGC	17	-	74035451-74035500	17q25.1d	Homo sapiens signal recognition particle 68kDa (SRP68), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10618370] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10618370] [evidence TAS]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [pmid 10618370] [evidence TAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 10618370] [evidence TAS]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	XM_943094.1	ILMN_3559	ITPRIPL2	NM_001034841.2	NM_001034841.2		162073	146149124	NM_001034841.2	ITPRIPL2	NP_001030013.1	ILMN_1751034	0001190739	A	2442	CTGCAGGGAAAGTTCCTTCTGTCGGTTTTTAGACACAGATCTCTCTGCCC	16	+	19035224-19035273	16p12.3b	Homo sapiens inositol 1,4,5-triphosphate receptor interacting protein-like 2 (ITPRIPL2), mRNA.				MGC126798; FLJ22994; MGC126800	
Homo sapiens	RefSeq	NM_015265.1	ILMN_15630	SATB2	NM_015265.1	NM_015265.1		23314	38016201	NM_015265.1	SATB2	NP_056080.1	ILMN_1738657	0001980682	S	4622	GCAGTGGTTCTAAGTGAATCTGTGGGCATTTTAGCCTGTGGTCTTGCCAG	2	-	199842795-199842844	2q33.1c-q33.1d	Homo sapiens SATB homeobox 2 (SATB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC119474; MGC119477; KIAA1034; FLJ21474; FLJ32076	MGC119474; MGC119477; KIAA1034; FLJ21474; FLJ32076
Homo sapiens	RefSeq	NM_145236.1	ILMN_18460	B3GNT7	NM_145236.1	NM_145236.1		93010	21687138	NM_145236.1	B3GNT7	NP_660279.1	ILMN_1721523	0003840020	S	1339	CTGGTGCACAGCAATCTCACCTGCTCCCGCAAGCTCCAGGTGCTCTGACC	2	+	231971833-231971880:231971881-231971882	2q37.1b	Homo sapiens UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 (B3GNT7), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	beta3GnT7	beta3GnT7
Homo sapiens	RefSeq	NM_004824.2	ILMN_174383	CDYL	NM_170751.1	NM_170751.1		9425	25777618	NM_170751.1	CDYL	NP_736607.1	ILMN_1678075	0001050114	A	3234	AGTTTATACTTAGAACTGACCACCTCCCCGGCCACGCGGAGAGCTGTACA	6	+	4900553-4900602	6p25.1c	Homo sapiens chromodomain protein, Y-like (CDYL), transcript variant 2, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10192397] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CDYL1; MGC131936; DKFZP586C1622	MGC131936; CDYL1; DKFZP586C1622
Homo sapiens	RefSeq	NM_173062.1	ILMN_24785	CAST	NM_173062.1	NM_173062.1		831	27765088	NM_173062.1	CAST	NP_775085.1	ILMN_1774674	0005080014	I	2	GAACATAGGGTACTCCGAGTGAAGAATTCAGCAGCTAAGTGGAAGTTGTC	5	+	96089770-96089819	5q15d	Homo sapiens calpastatin (CAST), transcript variant 4, mRNA.			Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue [goid 30161] [evidence IEA]; Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue [goid 30161] [evidence IEA]; Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue [goid 30161] [evidence IEA]	MGC9402; BS-17	MGC9402; BS-17
Homo sapiens	RefSeq	NM_194294.1	ILMN_15019	IDO2	NM_194294.2	NM_194294.2		169355	148539553	NM_194294.2	IDO2	NP_919270.2	ILMN_1670572	0001190703	S	1944	GGTCCCAGACCAGCCCTCTTCTCCCTGAATGTGTTGAGTTGGTGGCAGGA	8	+	39873560-39873609	8p11.21c	Homo sapiens indoleamine 2,3-dioxygenase 2 (IDO2), mRNA.					
Homo sapiens	RefSeq	NM_194294.2	ILMN_15019	IDO2	NM_194294.2	NM_194294.2		169355	148539553	NM_194294.2	IDO2	NP_919270.2	ILMN_3237462	0002600528	S	1689	GCCAAGCCTTTCCCTCCCTACCTGATCACTGCTTAACGGCATGTATAATG	8	+	39873305-39873354	8p11.21c	Homo sapiens indoleamine 2,3-dioxygenase 2 (IDO2), mRNA.					
Homo sapiens	RefSeq	NM_173811.2	ILMN_26553	HARBI1	NM_173811.2	NM_173811.2		283254	31341135	NM_173811.2	HARBI1	NP_776172.1	ILMN_1759828	0004880300	S	1191	ACAGGACCCATGGAACAGCCCCCGGAAGAGGAGTATGAGCACATGGAGTC	11	-	46581713-46581762	11p11.2c	Homo sapiens harbinger transposase derived 1 (HARBI1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ32675	FLJ32675
Homo sapiens	Unigene	Hs.555260	ILMN_112240	HS.555260	Hs.555260		Hs.555260		47357169	CN357235			ILMN_1896406	0001500386	S	293	CCTATAGAAAATGCAGAGGCCTGAGGTGAACGCAAGGGTCATAGGCATCC	X	-	57949032-57949081		17000532215901 GRN_ES Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NM_015931.1	ILMN_10644	C3ORF32	NM_015931.1	NM_015931.1		51066	7705707	NM_015931.1	C3orf32	NP_057015.1	ILMN_1666731	0007050598	S	1250	ACCAGGTGTATGCGGTGGACTATCCTGAGCGGTATTGCTGTGGCTGTACC	3	-	8661624-8661673	3p26.1a	Homo sapiens chromosome 3 open reading frame 32 (C3orf32), mRNA.				fls485	fls485
Homo sapiens	RefSeq	NM_003278.1	ILMN_1287	CLEC3B	NM_003278.1	NM_003278.1		7123	4507556	NM_003278.1	CLEC3B	NP_003269.1	ILMN_1682176	0004260441	S	542	CCCGCATCGCCTACAAGAACTGGGAGACTGAGATCACCGCGCAACCCGAT	3	+	45052268-45052317	3p21.31k	Homo sapiens C-type lectin domain family 3, member B (CLEC3B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 7798325] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	TN; TNA; DKFZp686H17246	TN; TNA; DKFZp686H17246
Homo sapiens	RefSeq	NM_006727.2	ILMN_16021	CDH10	NM_006727.2	NM_006727.2		1008	16306529	NM_006727.2	CDH10	NP_006718.2	ILMN_1791270	0002260424	S	2993	AGCAACCTCACAAACAAGCCGCTTCTGTTAGGTACATGTCCTGCCCTTGC	5	-	24528742-24528791	5p14.2a	Homo sapiens cadherin 10, type 2 (T2-cadherin) (CDH10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_928927.1	ILMN_174374	LOC645958	XR_019647.1	XR_019647.1		645958	113418248	XR_019647.1	LOC645958		ILMN_1702903	0000150044	S	392	CATGGTCTTATTTTATCTATTAACCATAAGCTTACAGATTCTAGTGAAGA				6q25.1a	PREDICTED: Homo sapiens hypothetical LOC645958 (LOC645958), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Homo sapiens	RefSeq	XM_212241.5	ILMN_42049	LOC645961	XM_212241.5	XM_212241.5		645961	89029881	XM_212241.5	LOC645961	XP_212241.2	ILMN_1660302	0002070750	S	466	CAGGGGCTGCAGTGAAATGGAGCGATACCGGCTCAGTGCCACCTTTGCTT	9	-	89938817-89938862:89939348-89939351	9q22.1a	PREDICTED: Homo sapiens similar to chromosome 9 open reading frame 36 (LOC645961), mRNA.					
Homo sapiens	RefSeq	XM_001720210.1	ILMN_351259	LOC100128056	XM_001720210.1	XM_001720210.1		100128056	169171882	XM_001720210.1	LOC100128056	XP_001720262.1	ILMN_3195372	0002640201	A	282	GTTGGGTTTCCAGTTTCACCGTGTGTTAGGGCGAGGGATGATTGTAAATT				7q31.1b	PREDICTED: Homo sapiens similar to hCG2013701 (LOC100128056), mRNA.					
Homo sapiens	RefSeq	NM_017715.2	ILMN_21977	ZNF3	NM_017715.2	NM_017715.2		7551	122114648	NM_017715.2	ZNF3	NP_060185.2	ILMN_2285091	0006020475	I	1417	GTTTGGTGAGATTTGAGCTATTACTAAAGGCTTTGCCACATTCAGCACAA	7	-	99517306-99517307:99661653-99661700	7q22.1b	Homo sapiens zinc finger protein 3 (ZNF3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2288909] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor [goid 45321] [pmid 2288909] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2288909] [evidence NAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18255255] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HF.12; KOX25; PP838; Zfp113; FLJ20216; A8-51	HF.12; KOX25; PP838; Zfp113; FLJ20216; A8-51
Homo sapiens	RefSeq	NM_017715.2	ILMN_21977	ZNF3	NM_017715.2	NM_017715.2		7551	122114648	NM_017715.2	ZNF3	NP_060185.2	ILMN_2390739	0003060215	A	399	AAGGACAGCCTGGGGGATGAGATGTTGGCGGCTGCGCTCCTAAAGGCCAA	7	-	99673171-99673220	7q22.1b	Homo sapiens zinc finger protein 3 (ZNF3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2288909] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor [goid 45321] [pmid 2288909] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2288909] [evidence NAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18255255] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HF.12; KOX25; PP838; Zfp113; FLJ20216; A8-51	HF.12; KOX25; PP838; Zfp113; FLJ20216; A8-51
Homo sapiens	RefSeq	XM_001722313.1	ILMN_340568	LOC390213	XM_001722313.1	XM_001722313.1		390213	169203542	XM_001722313.1	LOC390213	XP_001722365.1	ILMN_3205914	0004610059	A	1008	CATGGATGCCAATGGTTACTCGGACCCCTTCGTGCGCCTTTTCCTGCATC				11q13.2a	PREDICTED: Homo sapiens similar to hCG21066 (LOC390213), mRNA.					
Homo sapiens	RefSeq	XM_001719040.1	ILMN_346663	LOC100133166	XM_001719040.1	XM_001719040.1		100133166	169211023	XM_001719040.1	LOC100133166	XP_001719092.1	ILMN_3244925	0003940288	S	2	TGGAGGAAACTTTTCTTCTGGCTAAAGAAGAAAGACAGCTTGGTGAAGTG	17	+	38701795-38701799:38701894-38701938	17q21.31b	PREDICTED: Homo sapiens similar to neighbor of BRCA1 gene 1 (LOC100133166), mRNA.					
Homo sapiens	RefSeq	NM_001012302.1	ILMN_17016	ANO9	NM_001012302.2	NM_001012302.2		338440	145611445	NM_001012302.2	ANO9	NP_001012302.2	ILMN_1798679	0005720373	A	2267	CCTCAGTCGGTGAAGAACAAGGTTCTGGAGGTGAAGTACCAGAGGCTGCG	11	-	420743-420792	11p15.5d	Homo sapiens anoctamin 9 (ANO9), mRNA.				TP53I5; PIG5	TP53I5; PIG5
Homo sapiens	RefSeq	NM_001012302.1	ILMN_17016	ANO9	NM_001012302.2	NM_001012302.2		338440	145611445	NM_001012302.2	ANO9	NP_001012302.2	ILMN_1762629	0002750711	I	2526	TGTGAGAAGGCTGTGCCCATGTGGGGCCGCAGGAATCCCCTGTATGTTCA	11	-	420323-420372	11p15.5d	Homo sapiens anoctamin 9 (ANO9), mRNA.				TP53I5; PIG5	TP53I5; PIG5
Homo sapiens	RefSeq	XM_938582.1	ILMN_17016	ANO9	NM_001012302.2	NM_001012302.2		338440	145611445	NM_001012302.2	ANO9	NP_001012302.2	ILMN_1769259	0003400121	A	2225	TTGTGCATCAAGCTCATCGCCGCCTGGTTCGTGCCCGACATCCCTCAGTC	11	-	420785-420834	11p15.5d	Homo sapiens anoctamin 9 (ANO9), mRNA.				TP53I5; PIG5	
Homo sapiens	RefSeq	NM_001004693.1	ILMN_24068	OR2T10	NM_001004693.1	NM_001004693.1		127069	52317214	NM_001004693.1	OR2T10	NP_001004693.1	ILMN_1739168	0006620470	S	719	CCTGCTCCTCCCACATTACAGTGGTCAGCCTCTTCTATGGAGCTGCTATT	1	-	248756301-248756350	1q44f	Homo sapiens olfactory receptor, family 2, subfamily T, member 10 (OR2T10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-64	OR1-64
Homo sapiens	RefSeq	NM_013409.1	ILMN_11736	FST	NM_013409.1	NM_013409.1		10468	7242221	NM_013409.1	FST	NP_037541.1	ILMN_1700081	0006020286	A	817	AGAGGCCGGTGTTCCCTCTGTGATGAGCTGTGCCCTGACAGTAAGTCGGA	5	+	52780895-52780944	5q11.2c	Homo sapiens follistatin (FST), transcript variant FST344, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 12702211] [evidence IDA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence IEA]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IEA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; The multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population. Keratinocytes are epidermal cells which synthesize keratin and undergo a characteristic change as they move upward from the basal layers of the epidermis to the cornified (horny) layer of the skin [goid 43616] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of follicle-stimulating hormone [goid 46882] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [pmid 12514121] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12697670] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16198295] [evidence IPI]; Acts to negatively regulate the activity of activin, a nonsteroidal regulator synthesized in the pituitary gland and gonads that stimulates the secretion of follicle-stimulating hormone [goid 17106] [pmid 12702211] [evidence NAS]	FS	FS
Homo sapiens	RefSeq	NM_001037872.1	ILMN_12034	REV1	NM_001037872.1	NM_001037872.1		51455	84043966	NM_001037872.1	REV1	NP_001032961.1	ILMN_2395474	0003170669	A	3979	GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCA	2	-	100017640-100017689	2q11.2c	Homo sapiens REV1 homolog (S. cerevisiae) (REV1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 10536157] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 11485998] [evidence IDA]; The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication, without removing the replication-blocking lesions, and with an increase in the endogenous mutation level. For example, in E. coli, a low fidelity DNA polymerase, pol V, copies lesions that block replication fork progress. This produces mutations specifically targeted to DNA template damage sites, but it can also produce mutations at undamaged sites [goid 42276] [evidence IEA]; The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication, without removing the replication-blocking lesions, and with an increase in the endogenous mutation level. For example, in E. coli, a low fidelity DNA polymerase, pol V, copies lesions that block replication fork progress. This produces mutations specifically targeted to DNA template damage sites, but it can also produce mutations at undamaged sites [goid 42276] [pmid 11485998] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with damaged DNA [goid 3684] [pmid 10536157] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11485998] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the insertion of a dCMP residue opposite a template abasic site in DNA [goid 17125] [evidence IEA]	MGC163283; MGC26225; FLJ21523; REV1L	MGC163283; MGC26225; FLJ21523; REV1L
Homo sapiens	RefSeq	XM_928923.1	ILMN_39386	LOC653689	XM_928923.1	XM_928923.1		653689	89058909	XM_928923.1	LOC653689	XP_934016.1	ILMN_1784267	0002060670	S	94	GATCCCGAAAAGCAGACCTGCTTCTCCCTGTCCAGCCGGTTCCCCTTCCC	22	-	22633641-22633690	22q11.23a-q11.23b	PREDICTED: Homo sapiens similar to Glutathione S-transferase theta 2 (GST class-theta 2) (LOC653689), mRNA.					
Homo sapiens	RefSeq	XR_039124.1	ILMN_344343	LOC729298	XR_039124.1	XR_039124.1		729298	169204834	XR_039124.1	LOC729298		ILMN_3225843	0006270156	A	321	AGCAGCTCTTAATGAAGATGAAGATGGATACACCAACATCAGCTGGACCG				12q14.3b	PREDICTED: Homo sapiens misc_RNA (LOC729298), miscRNA.					
Homo sapiens	RefSeq	NM_001007027.1	ILMN_28615	ALG8	NM_024079.4	NM_024079.4		79053	91984776	NM_024079.4	ALG8	NP_076984.2	ILMN_1685413	0004850632	A	1451	CTACCTGCTTGGCCTGGGGCCTCTGGAAGTCTGCTGTGAATTTGTATTCC	11	-	77812155-77812204	11q14.1a	Homo sapiens asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae) (ALG8), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 12480927] [evidence IMP]	Catalysis of the transfer of a mannose residue from GDP-mannose to an oligosaccharide, forming an alpha-1,3-linkage [goid 33] [pmid 12480927] [evidence IMP]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC2840	MGC2840
Homo sapiens	RefSeq	NM_019024.1	ILMN_25274	HEATR5B	NM_019024.1	NM_019024.1		54497	55749741	NM_019024.1	HEATR5B	NP_061897.1	ILMN_1810805	0000360577	S	6243	GGCTGCCAGACAACCAGCCCCCGCCATACATTCTGCACCAACAATTAAGC	2	-	37208652-37208701	2p22.2b	Homo sapiens HEAT repeat containing 5B (HEATR5B), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA1414	KIAA1414
Homo sapiens	Unigene	Hs.575367	ILMN_127548	HS.575367	Hs.575367		Hs.575367		80843219	DA670474			ILMN_1912756	0007150477	S	411	TCTGTGTGAAAGAGACGCAGAGGGAGAAGGCGGCCCTGTGAAGATGGAGG	6	+	11461594-11461643		DA670474 NETRP2 Homo sapiens cDNA clone NETRP2000563 5, mRNA sequence					
Homo sapiens	RefSeq	XR_042493.1	ILMN_333983	LOC400419	XR_042493.1	XR_042493.1		400419	169209067	XR_042493.1	LOC400419		ILMN_3274405	0003830468	M	636	ACCCTCAGAGCAGACCCCTGGGAACCCTTTGATCAATTTCCTGCCTGAGG				15q25.2a	PREDICTED: Homo sapiens misc_RNA (LOC400419), miscRNA.					
Homo sapiens	RefSeq	XR_038390.1	ILMN_345337	LOC100129751	XR_038390.1	XR_038390.1		100129751	169202189	XR_038390.1	LOC100129751		ILMN_3188449	0005560274	A	135	GGTATCATGTGTGTTCACCTGCCTATCTTGCCCTATTTCTTTGGTTGCTG	11	+	63066561-63066610	11q12.3b	PREDICTED: Homo sapiens misc_RNA (LOC100129751), miscRNA.					
Homo sapiens	RefSeq	NM_001033053.1	ILMN_163738	LOC730994	XM_001132373.1	XM_001132373.1		730994	113427242	XM_001132373.1	LOC730994	XP_001132373.1	ILMN_1680774	0003800273	I	1905	CTTGGGGACTCTAGGATGGCTTCGTTCTGGCCCGGCTCACTTCTGGAGCT					PREDICTED: Homo sapiens similar to NACHT, leucine rich repeat and PYD (pyrin domain) containing 1, transcript variant 1 (LOC730994), mRNA.					CARD7; DKFZp586O1822; KIAA0926; PP1044; DEFCAP; DEFCAP-L/S
Homo sapiens	RefSeq	XM_498717.2	ILMN_41598	LOC440525	XM_498717.2	XM_498717.2		440525	89056782	XM_498717.2	LOC440525	XP_498717.2	ILMN_1662409	0005810092	A	138	TGGCATGGTTGGACCAGCAGTGATAGTGGACAAGAAGATGCAGAAGAAAA	19	-	45141091-45141140	19q13.2b	PREDICTED: Homo sapiens hypothetical LOC440525, transcript variant 1 (LOC440525), mRNA.					
Homo sapiens	RefSeq	XM_929864.1	ILMN_31859	LOC646903	XM_929864.1	XM_929864.1		646903	88965868	XM_929864.1	LOC646903	XP_934957.1	ILMN_1797073	0004540292	S	1	ATGAGGGACGAACCTCAGAGCGCGCTCGGCCGCCCGGCCGCCCGCAGCCG	3	+	151171516-151171565	3q25.1a	PREDICTED: Homo sapiens hypothetical protein LOC646903 (LOC646903), mRNA.					
Homo sapiens	RefSeq	NM_032433.2	ILMN_1170	ZNF333	NM_032433.2	NM_032433.2		84449	57164943	NM_032433.2	ZNF333	NP_115809.1	ILMN_1759017	0002750148	S	3212	GTGACCATAAGGGTAAAAGCCGCAAGCTAAGAAGAGGGTGGCCGGAAGTC	19	+	14692217-14692266	19p13.12b	Homo sapiens zinc finger protein 333 (ZNF333), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	KIAA1806	KIAA1806
Homo sapiens	RefSeq	NM_032433.2	ILMN_1170	ZNF333	NM_032433.2	NM_032433.2		84449	57164943	NM_032433.2	ZNF333	NP_115809.1	ILMN_2209299	0003870300	S	3327	TGTGATTGCAGCAGCCCTGGACTATTTATTTCTGGATGTCCCATACATGA	19	+	14692332-14692381	19p13.12b	Homo sapiens zinc finger protein 333 (ZNF333), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	KIAA1806	KIAA1806
Homo sapiens	RefSeq	NM_001008485.1	ILMN_19829	SLC41A3	NM_001008485.1	NM_001008485.1		54946	56549672	NM_001008485.1	SLC41A3	NP_001008485.1	ILMN_1739885	0000940373	A	1590	TCGGTTCAAGCTCCGTGGGCCACACTGCTGCTGTGCCAAGAAGGTGTACA	3	-	127208050-127208097:127208647-127208648	3q21.2c	Homo sapiens solute carrier family 41, member 3 (SLC41A3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	FLJ20473; SLC41A1-L2	FLJ20473; SLC41A1-L2
Homo sapiens	RefSeq	NM_024574.2	ILMN_175315	C4ORF31	NM_024574.3	NM_024574.3		79625	109715836	NM_024574.3	C4orf31	NP_078850.3	ILMN_1689176	0001010746	S	2477	CTTGAAGGAACTTGCCATTCCTTGCTTTGACCACTGCATGAACTGCTTCT	4	-	122176576-122176625	4q27b	Homo sapiens chromosome 4 open reading frame 31 (C4orf31), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ23191	
Homo sapiens	RefSeq	XR_038954.1	ILMN_336979	LOC100129707	XR_038954.1	XR_038954.1		100129707	169165165	XR_038954.1	LOC100129707		ILMN_3255269	0004590735	M	1668	GCAGTGCATCCTGGGGGAGCTCTCTTTGGAATATGGTATGTTACTTATGG	3	+	121231261-121231310	3q13.33a	PREDICTED: Homo sapiens misc_RNA (LOC100129707), miscRNA.					
Homo sapiens	RefSeq	NM_001004358.1	ILMN_28273	FGFRL1	NM_001004358.1	NM_001004358.1		53834	51988913	NM_001004358.1	FGFRL1	NP_001004358.1	ILMN_2348367	0005860112	A	2750	ACAGCAGCCCCAAGCCTGAGAGGCTGGAGCCCATGGCTAGTGGCTCATCC	4	+	1010227-1010276	4p16.3c	Homo sapiens fibroblast growth factor receptor-like 1 (FGFRL1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11031111] [evidence NAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 21167383] [evidence NAS]	FGFR5; FHFR	FGFR5; FHFR
Homo sapiens	RefSeq	XM_938993.1	ILMN_45521	LOC649910	XM_938993.1	XM_938993.1		649910	89061565	XM_938993.1	LOC649910	XP_944086.1	ILMN_1778767	0003710477	S	897	GAATGTAACGGGAAGCATCCAGCATGGAACAGGAAGCGTCCAGCGTGGAG					PREDICTED: Homo sapiens similar to H02F09.3 (LOC649910), mRNA.					
Homo sapiens	RefSeq	NM_144727.1	ILMN_14907	CRYGN	NM_144727.1	NM_144727.1		155051	21389516	NM_144727.1	CRYGN	NP_653328.1	ILMN_1687409	0007610242	S	446	CCTTCCTCCAGAGCAGGGGCTGGGTCAAGAACTGTGTGAACACCATCAAG	7	-	151133282-151133331	7q36.1d	Homo sapiens crystallin, gamma N (CRYGN), mRNA.				MGC119045; MGC119044; MGC119042; MGC119043	MGC119045; MGC119044; MGC119042; MGC119043
Homo sapiens	RefSeq	XM_001720790.1	ILMN_337593	LOC649445	XM_001720790.1	XM_001720790.1		649445	169206885	XM_001720790.1	LOC649445	XP_001720842.1	ILMN_3278754	0004760132	M	772	CCCTTGAGCCGAGACATCTGTTGGGACCTGACCCCCAGTCATTGATTACC	14	-	24805681-24805730	14q12a	PREDICTED: Homo sapiens similar to high mobility group nucleosomal binding domain 2, transcript variant 1 (LOC649445), mRNA.					
Homo sapiens	RefSeq	NM_170736.1	ILMN_164363	KCNJ15	NM_170736.1	NM_170736.1		3772	25777637	NM_170736.1	KCNJ15	NP_733932.1	ILMN_1659770	0005390328	I	35	TCTCTCTTCAGTTCCTCCAGGTAATTCTTACTCAAACTTGTACCAACTTG	21	+	38550774-38550823	21q22.13b	Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 15 (KCNJ15), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8995301] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8995301] [evidence TAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	 [goid 5242] [pmid 8995301] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA];  [goid 5242] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 5242] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIR4.2; MGC13584; KIR1.3; IRKK	KIR1.3; IRKK; KIR4.2; MGC13584
Homo sapiens	RefSeq	NM_002243.3	ILMN_164363	KCNJ15	NM_170736.1	NM_170736.1		3772	25777637	NM_170736.1	KCNJ15	NP_733932.1	ILMN_1675756	0001050215	A	2663	CAGATGCTGATGTTTGTAAGGTCCGGTGGGGCCATGAGGAAGAAGAGGAG	21	+	38595362-38595411	21q22.13b	Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 15 (KCNJ15), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8995301] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8995301] [evidence TAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	 [goid 5242] [pmid 8995301] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA];  [goid 5242] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 5242] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIR4.2; MGC13584; KIR1.3; IRKK	KIR1.3; IRKK; KIR4.2; MGC13584
Homo sapiens	RefSeq	XM_932110.1	ILMN_35211	LOC644299	XM_932110.1	XM_932110.1		644299	89029471	XM_932110.1	LOC644299	XP_937203.1	ILMN_1763626	0001340672	S	3951	AAAAAACAAAACCGCGCAGCGGAGAACCGGTGCCTGAGTCTCCCAGGGAC	9	+	67793504-67793553		PREDICTED: Homo sapiens hypothetical protein LOC644299 (LOC644299), mRNA.					
Homo sapiens	RefSeq	XM_173132.4	ILMN_45142	LOC255620	XM_173132.4	XM_173132.4		255620	89034123	XM_173132.4	LOC255620	XP_173132.2	ILMN_1807114	0000580575	A	796	CGCCTGGTCCACGGACTCAGCCTCCCTCCTCGCCGGCCTTAGTTTACCAC	11	+	70996297-70996346	11q13.4a	PREDICTED: Homo sapiens similar to unc-93 homolog B1, transcript variant 1 (LOC255620), mRNA.					
Homo sapiens	RefSeq	NM_138559.1	ILMN_17359	BCL11A	NM_022893.3	NM_022893.3		53335	148539885	NM_022893.3	BCL11A	NP_075044.2	ILMN_1659800	0006100364	A	284	CCGAGCCTCTTGAAGCCATTCTTACAGATGATGAACCAGACCACGGCCCG	2	-	60773385-60773434	2p16.1a	Homo sapiens B-cell CLL/lymphoma 11A (zinc finger protein) (BCL11A), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BCL11A-L; CTIP1; FLJ10173; EVI9; BCL11A-XL; HBFQTL5; BCL11A-S; FLJ34997; KIAA1809	BCL11A-L; CTIP1; FLJ10173; BCL11A-XL; BCL11A-S; FLJ34997; KIAA1809; EVI9; HBFQTL5
Homo sapiens	Unigene	Hs.520926	ILMN_99858	HS.520926	Hs.520926		Hs.520926		34527483	AK130634			ILMN_1902689	0000650747	S	937	CGGCAACCTCCTCCATCCTTGGGGAAAGAGGCAACAGGTGCAAATTCTCC	8	-	19669694-19669743		Homo sapiens cDNA FLJ27124 fis, clone SPL07120					
Homo sapiens	RefSeq	NM_139062.1	ILMN_12836	CSNK1D	NM_001893.3	NM_001893.3		1453	20544143	NM_001893.3	CSNK1D	NP_001884.2	ILMN_1720708	0000780762	A	1823	TTGCAGAGAATCAGACTCCTTTTCCAGGGCCTCAGCTCCCTCCAGTGGTG	17	-	80202348-80202397	17q25.3g	Homo sapiens casein kinase 1, delta (CSNK1D), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8786104] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8786104] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8786104] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HCKID	HCKID
Homo sapiens	Unigene	Hs.574587	ILMN_126768	HS.574587	Hs.574587		Hs.574587		82332548	DA863698			ILMN_1860939	0000160609	S	276	GGGAAGGTCCCGAAGAACCACAGAAGAACAACAGAATTCAGCACCTGAGC	19	+	58243987-58244036		DA863698 PLACE7 Homo sapiens cDNA clone PLACE7017209 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001007231.1	ILMN_1674	ARHGAP25	NM_001007231.1	NM_001007231.1		9938	55770897	NM_001007231.1	ARHGAP25	NP_001007232.1	ILMN_1658853	0005290523	I	283	GGGAAAGAGTGAAAAGACAAGAAGGGCGCAAACTGTGACAGACTCACCGC	2	+	68815754-68815803	2p14a	Homo sapiens Rho GTPase activating protein 25 (ARHGAP25), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	KAIA0053	KAIA0053
Homo sapiens	RefSeq	NM_001467.3	ILMN_24454	SLC37A4	NM_001467.4	NM_001467.4		2542	116686112	NM_001467.4	SLC37A4	NP_001458.1	ILMN_1678678	0005130577	S	1936	GACTGCTGTTGCCAATACCTCAGACTCCAGGGAAAGAGAGGAGGCCATCA	11	-	118400362-118400411	11q23.3e	Homo sapiens solute carrier family 37 (glucose-6-phosphate transporter), member 4 (SLC37A4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 212064] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 9428641] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9428641] [evidence NAS]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 10318794] [evidence IDA]	The process of regulating the proliferation and elimination of neutrophils such that the total number of neutrophils within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1780] [evidence IEA]; The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a myeloid progenitor cell. Myeloid progenitor cells include progenitor cells for any of the myeloid lineages [goid 2318] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [pmid 9428641] [evidence NAS]; The chemical reactions and pathways involving lactate, the anion of lactic acid [goid 6089] [evidence IEA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [pmid 11140953] [evidence IDA]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [pmid 12560945] [evidence IMP]; The directed movement of glucose-6-phosphate into, out of, within or between cells. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15760] [pmid 11140953] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of chemokine production [goid 32682] [evidence IEA]; The stages of blood cell formation that take place after completion of embryonic development [goid 35166] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [pmid 11140953] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IEA]; A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 45730] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9428641] [evidence NAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [pmid 9428641] [evidence EXP]; Catalysis of the transfer of glucose-6-phosphate from one side of the membrane to the other. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15152] [pmid 11140953] [evidence IDA]; Catalysis of the transfer of glucose-6-phosphate from one side of the membrane to the other. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15152] [pmid 12560945] [evidence IMP]; Catalysis of the transfer of glucose-6-phosphate from one side of the membrane to the other. Glucose-6-phosphate is a monophosphorylated derivative of glucose with the phosphate group attached to C-6 [goid 15152] [pmid 11140953] [evidence IDA]	G6PT3; GSD1b; TRG19; G6PT2; GSD1d; GSD1c; MGC15729; G6PT1; PRO0685	GSD1b; TRG19; MGC15729; G6PT1; PRO0685
Homo sapiens	RefSeq	NM_013368.2	ILMN_162786	SERTAD3	NM_013368.2	NM_013368.2		29946	15718683	NM_013368.2	SERTAD3	NP_037500.2	ILMN_1804502	0004880431	I	196	GGCTTAGAGGAACTTGAGTTAGGATCCGTACTTGGCAGATGAGGAAATTG	19	-	45640100-45640149	19q13.2b	Homo sapiens SERTA domain containing 3 (SERTAD3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16098148] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 16098148] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	RBT1	RBT1
Homo sapiens	RefSeq	NM_203344.1	ILMN_162786	SERTAD3	NM_013368.2	NM_013368.2		29946	15718683	NM_013368.2	SERTAD3	NP_037500.2	ILMN_1801934	0003370474	A	1215	AAAGAAAGCTGGGCCTGTCGAAGGATGACAGGGATGTGCTGCCAGGTTGC	19	-	45638841-45638890	19q13.2b	Homo sapiens SERTA domain containing 3 (SERTAD3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16098148] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 16098148] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	RBT1	RBT1
Homo sapiens	RefSeq	NR_024430.1	ILMN_371215	LOC399959	NR_024430.1	NR_024430.1		399959	212549571	NR_024430.1	LOC399959		ILMN_3244176	0001580246	S	2857	GCATTGTCAGACTTCAATCTCCTCATGGCTCTGGCCGTCCTGTTTTAAGC	11	-	121959986-121960035		Homo sapiens hypothetical LOC399959 (LOC399959), non-coding RNA.					
Homo sapiens	RefSeq	XR_001113.1	ILMN_42221	LOC554223	XR_001113.1	XR_001113.1		554223	88998672	XR_001113.1	LOC554223		ILMN_1770410	0005560243	I	2263	CAGCCCTGGAAGACAACTAGACTGCAACTTTGTGAGAGGCCCTGAGCCAG					PREDICTED: Homo sapiens hypothetical LOC554223, transcript variant 1 (LOC554223), misc RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]			
Homo sapiens	RefSeq	XM_372775.3	ILMN_42023	LOC391025	XM_372775.3	XM_372775.3		391025	88942572	XM_372775.3	LOC391025	XP_372775.3	ILMN_1688757	0004250324	S	2359	TTCTTGCCCTGGGCCCGTCGCACCCTGGAGCAGGCTGCTGTCTCCCACAT	1	-	29651829-29651857:29657179-29657199	1p35.3a	PREDICTED: Homo sapiens similar to protein tyrosine phosphatase, receptor type, U isoform 2 precursor (LOC391025), mRNA.					
Homo sapiens	RefSeq	NM_020795.2	ILMN_22430	NLGN2	NM_020795.2	NM_020795.2		57555	31317254	NM_020795.2	NLGN2	NP_065846.1	ILMN_1764158	0004830477	S	4485	GACCCCATGATTCAGCCACGGACTCCAATGCCCAGCTCCTCTCCCCAAAA	17	+	7263746-7263795	17p13.1d	Homo sapiens neuroligin 2 (NLGN2), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [pmid 10892652] [evidence NAS]	The biosynthesis of a synapse [goid 7416] [pmid 10892652] [evidence NAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 10892652] [evidence NAS]; The maintenance of junctions between cells [goid 45217] [pmid 10892652] [evidence NAS]	Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [pmid 10892652] [evidence NAS]	KIAA1366	KIAA1366
Homo sapiens	RefSeq	XM_943387.1	ILMN_168231	FLJ41766	XM_375307.4	XM_375307.4		400508	113425918	XM_375307.4	FLJ41766	XP_375307.1	ILMN_1713983	0003360341	A	871	GGTAAGTATACCTCCAGGGGTGTGTGATTTTGTGCCACAGGTCAGTGGTC	16	+	21236256-21236305	16p12.2b	PREDICTED: Homo sapiens similar to hypothetical protein, transcript variant 1 (FLJ41766), mRNA.					
Homo sapiens	RefSeq	NR_030293.1	ILMN_388013	MIR568	NR_030293.1	NR_030293.1		693153	262205809	NR_030293.1	MIR568		ILMN_3309324	0006280349	S	30	CACACTTCCTATATGTATCCACATATATATAGTGTATATATTATACATGT					Homo sapiens microRNA 568 (MIR568), microRNA.					
Homo sapiens	RefSeq	NM_022053.1	ILMN_17503	NXF2	NM_022053.1	NM_022053.1		56001	13430853	NM_022053.1	NXF2	NP_071336.1	ILMN_2333829	0004860333	A	2060	TTCACTATGCTCCAGACCGAGGGCAAGATCCCCGCAGAGGCCTTCAAGCA	X	+	101467879-101467893:101468040-101468074	Xq22.1d	Homo sapiens nuclear RNA export factor 2 (NXF2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A complex of NXF1 and NXF2 required for the export of the majority of mRNAs from the nucleus to the cytoplasm; localized in the nucleoplasm and at both the nucleoplasmic and cytoplasmic faces of the nuclear pore complex; shuttles between the nucleus and the cytoplasm [goid 42272] [pmid 11073998] [evidence NAS]	The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 11073998] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11073998] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	TAPL-2; FLJ20416	TAPL-2; FLJ20416
Homo sapiens	RefSeq	NM_022053.1	ILMN_17503	NXF2	NM_022053.1	NM_022053.1		56001	13430853	NM_022053.1	NXF2	NP_071336.1	ILMN_2253537	0000670653	I	9	AGATTCTGAGGGGAAGTGTAGCTCCCAGGTTGGTTCCAAGTCTTCTTCCA	X	+	101388834-101388883	Xq22.1d	Homo sapiens nuclear RNA export factor 2 (NXF2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A complex of NXF1 and NXF2 required for the export of the majority of mRNAs from the nucleus to the cytoplasm; localized in the nucleoplasm and at both the nucleoplasmic and cytoplasmic faces of the nuclear pore complex; shuttles between the nucleus and the cytoplasm [goid 42272] [pmid 11073998] [evidence NAS]	The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 11073998] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 11073998] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	TAPL-2; FLJ20416	TAPL-2; FLJ20416
Homo sapiens	RefSeq	NM_001616.3	ILMN_174413	ACVR2A	NM_001616.3	NM_001616.3		92	65508448	NM_001616.3	ACVR2A	NP_001607.1	ILMN_2152711	0004590349	S	4950	CAGATATTCAACCAGCAGTACGTTTTTTATGCAGTCTCAACCCATATCCC	2	+	148404569-148404618	2q22.3c-q23.1a	Homo sapiens activin A receptor, type IIA (ACVR2A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14738881] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17356069] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1314589] [evidence TAS]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [pmid 18436533] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 18436533] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the activity of any activin receptor signaling pathway [goid 32927] [pmid 12665502] [evidence IDA]; The expulsion of seminal fluid, thick white fluid containing spermatozoa, from the male genital tract [goid 42713] [evidence IEA]; The hardening, enlarging and rising of the penis which often occurs in the sexually aroused male and enables sexual intercourse. Achieved by increased inflow of blood into the vessels of erectile tissue, and decreased outflow [goid 43084] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [pmid 9032295] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [pmid 18436533] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IEA]; Any process that modulates the activity of the enzyme nitric-oxide synthase [goid 50999] [evidence IEA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 10746731] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with activin, one of two gonadal glycoproteins related to transforming growth factor beta, to initiate a change in cell activity [goid 17002] [pmid 12665502] [evidence IDA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IEA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [pmid 9032295] [evidence IPI]; Interacting selectively with inhibin beta-A [goid 48186] [pmid 7890768] [evidence IDA]	ACTRII; ACVR2	ACTRII; ACVR2
Homo sapiens	RefSeq	XM_929911.1	ILMN_46766	LOC646946	XM_929911.1	XM_929911.1		646946	88982621	XM_929911.1	LOC646946	XP_935004.1	ILMN_1755975	0004210747	S	355	CACCCAGTGGTTCTCAATGCCTATACCCTGCTAACTCAAGTACCTGAGAG	5	+	45833311-45833360		PREDICTED: Homo sapiens hypothetical protein LOC646946 (LOC646946), mRNA.					
Homo sapiens	RefSeq	XM_001721034.1	ILMN_343965	LOC100128295	XM_001721034.1	XM_001721034.1		100128295	169191496	XM_001721034.1	LOC100128295	XP_001721086.1	ILMN_3263384	0005090725	M	186	GTCCCACTGGGCCAAGCAACTGTTTCCTGCCAATGTTCTTCATTCAGTGT	10	+	64857248-64857297	10q21.3a	PREDICTED: Homo sapiens similar to hCG1639947 (LOC100128295), mRNA.					
Homo sapiens	RefSeq	NM_017890.3	ILMN_182950	VPS13B	NM_017890.3	NM_017890.3		157680	35493712	NM_017890.3	VPS13B	NP_060360.3	ILMN_2268409	0003190113	I	4353	GGTTCGACCCATCAGCAAGCAGGACCCTTTCAGTAATTGCTCTGGCTTCT	8	+	100218121-100218156:100224378-100224391	8q22.2a-q22.2b	Homo sapiens vacuolar protein sorting 13 homolog B (yeast) (VPS13B), transcript variant 5, mRNA.		The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		COH1; DKFZp313I0811; CHS1; KIAA0532	COH1; DKFZp313I0811; CHS1; KIAA0532
Homo sapiens	RefSeq	NM_001044722.1	ILMN_179145	CSNK1G3	NM_001044722.1	NM_001044722.1		1456	113462007	NM_001044722.1	CSNK1G3	NP_001038187.1	ILMN_2332267	0005310630	A	2543	GTCACTGCCCAGAGGTACTGAGGAAAAAGCAATATGGGTTCGGCAGATGG	5	+	122924177-122924205:122926107-122926127	5q23.2b	Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9925945] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9925945] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_004328.3	ILMN_162682	BCS1L	NM_001079866.1	NM_001079866.1		617	119964729	NM_001079866.1	BCS1L	NP_001073335.1	ILMN_1738529	0007100131	S	1210	ACTGGCAGCTGACCCAGATGTTCCAGAGGTTCTATCCAGGGCAGGCACCT	2	+	219236166-219236215	2q35e	Homo sapiens BCS1-like (yeast) (BCS1L), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains about 10 polypeptide subunits including four redox centers: cytochrome b/b6, cytochrome c1 and an 2Fe-2S cluster. Catalyzes the oxidation of ubiquinol by oxidized cytochrome c1 [goid 5750] [pmid 9878253] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9878253] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA];  [goid 15980] [pmid 9878253] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	BCS; Hs.6719; BCS1; FLNMS; BJS; h-BCS; PTD; GRACILE	BCS; Hs.6719; BCS1; FLNMS; h-BCS; GRACILE
Homo sapiens	RefSeq	XM_001720357.1	ILMN_338039	LOC100129034	XM_001720357.1	XM_001720357.1		100129034	169179326	XM_001720357.1	LOC100129034	XP_001720409.1	ILMN_3256478	0006590349	M	5635	CGCGACCCTGCGGGCAGCGCTTAGGACTGCACATTTACATTTCCCAAATG				9q33.3a	PREDICTED: Homo sapiens hypothetical protein LOC100129034 (LOC100129034), mRNA.					
Homo sapiens	RefSeq	NM_032039.1	ILMN_12959	ITFG3	NM_032039.1	NM_032039.1		83986	14042969	NM_032039.1	ITFG3	NP_114428.1	ILMN_1810055	0006250553	S	2582	GCTGTGGAATGCGTGTTTGGGTCAGTCTGTGCCCTCTCAGTAGACACTGG	16	+	255781-255830	16p13.3f	Homo sapiens integrin alpha FG-GAP repeat containing 3 (ITFG3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ32603; DKFZP761D0211; gene +108; C16orf9; gs19	FLJ32603; DKFZP761D0211; gene +108; C16orf9; gs19
Homo sapiens	Unigene	Hs.128393	ILMN_76631	HS.128393	Hs.128393		Hs.128393		27825494	BX092776			ILMN_1831098	0000510706	S	18	CCCAAACCCCTTATTTCCCAATTCTACACCTCATCAGGGGACTATGGAGG	14	-	75492270-75492319		BX092776 NCI_CGAP_GC4 Homo sapiens cDNA clone IMAGp998E034025 ; IMAGE:1587818, mRNA sequence					
Homo sapiens	RefSeq	XM_945431.1	ILMN_30859	LOC646628	XM_945431.1	XM_945431.1		646628	89034668	XM_945431.1	LOC646628	XP_950524.1	ILMN_1669051	0003370438	S	1	ATGGGAGACTCAGCCCTGGGCGGCGGGGCCCGACGGCCGGGTTGTGCGGC				11p11.2c	PREDICTED: Homo sapiens hypothetical LOC646628 (LOC646628), mRNA.					
Homo sapiens	RefSeq	NM_002448.1	ILMN_166878	MSX1	NM_002448.3	NM_002448.3		4487	118582283	NM_002448.3	MSX1	NP_002439.2	ILMN_1777397	0001010333	S	1424	GGTCCCCAGCAGAATTGACAGTTGAACAGAGCTAGAGGCCATGTCTCCTG	4	+	4865147-4865196	4p16.2a	Homo sapiens msh homeobox 1 (MSX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8696335] [evidence TAS]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX7; HYD1	HOX7; HYD1; OFC5
Homo sapiens	Unigene	Hs.565857	ILMN_118272	HS.565857	Hs.565857		Hs.565857		19706258	BM986869			ILMN_1865935	0000430246	S	107	ATGCCAGAGGGGGCATTCTTCGGGCTAGAGTTGTGGCAGTGTTGGGCTGA					UI-H-CO0-aqj-a-08-0-UI.s1 NCI_CGAP_Sub9 Homo sapiens cDNA clone IMAGE: 3104126 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004238.1	ILMN_21755	TRIP12	NM_004238.1	NM_004238.1		9320	10863902	NM_004238.1	TRIP12	NP_004229.1	ILMN_1720241	0006590441	S	6031	GCGTGAAAAACTGTTGATAGCAGCAAGAGAAGGGCAGCAGTCGTTCCATC	2	-	230632277-230632326	2q36.3e	Homo sapiens thyroid hormone receptor interactor 12 (TRIP12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence NAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 7776974] [evidence IDA]	KIAA0045; MGC138850; MGC138849	KIAA0045; MGC138850; MGC138849
Homo sapiens	RefSeq	NM_012101.2	ILMN_9774	TRIM29	NM_012101.3	NM_012101.3		23650	109826574	NM_012101.3	TRIM29	NP_036233.2	ILMN_1741755	0002370747	I	2755	CAAAAGGTGCCTTACACACTGCCCCCACCCTCAGCCGTTGCCCCATCAGA	11	-	119982208-119982257	11q23.3g	Homo sapiens tripartite motif-containing 29 (TRIM29), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8188213] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8188213] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ36085; ATDC	ATDC
Homo sapiens	RefSeq	NM_058193.1	ILMN_9774	TRIM29	NM_012101.3	NM_012101.3		23650	109826574	NM_012101.3	TRIM29	NP_036233.2	ILMN_1657766	0000780750	A	1828	GTCTCACTACCGGCCATTCTACGTCAACAAAGGCAACGGGATTGGGTCCA	11	-	119983135-119983184	11q23.3g	Homo sapiens tripartite motif-containing 29 (TRIM29), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8188213] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8188213] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ36085; ATDC	ATDC
Homo sapiens	RefSeq	NM_003152.2	ILMN_10520	STAT5A	NM_003152.2	NM_003152.2		6776	21618341	NM_003152.2	STAT5A	NP_003143.2	ILMN_1753547	0001940487	S	3976	GCCATGTGCTGCGTGCCTGTGGAATCTGGAGTGAGGGGTAAAAGCTGATC	17	+	37717162-37717211	17q21.2b	Homo sapiens signal transducer and activator of transcription 5A (STAT5A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation [goid 1553] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a natural killer cell [goid 1779] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 7719937] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [evidence IEA]; The secretion of milk by the mammary gland [goid 7595] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving steroids [goid 19218] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of epithelial cell differentiation [goid 30856] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IEA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte differentiation [goid 45647] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IEA]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whose specific outcome is the progression of the secondary female sexual characteristics over time, from their formation to the mature structures. In female humans, these include growth of axillary and pubic hair, breast development and menstrual periods. Their development occurs in response to sex hormone secretion [goid 46543] [evidence IEA]; The process whose specific outcome is the progression of the secondary male sexual characteristics over time, from their formation to the mature structures. In male humans, these include growth of axillary, chest, and pubic hair, voice changes, and testicular/penile enlargement. Development occurs in response to sex hormone secretion [goid 46544] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8631883] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7719937] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16819511] [evidence IPI]	MGF; STAT5	MGF; STAT5
Homo sapiens	RefSeq	NM_006233.4	ILMN_17223	POLR2I	NM_006233.4	NM_006233.4		5438	47933390	NM_006233.4	POLR2I	NP_006224.1	ILMN_1720542	0001010347	S	619	GATCACGCACGAAGTGGACGAACTGACCCAGATTATCGCCGACGTGTCCC	19	-	41296961-41296993:41297081-41297097	19q13.12b	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa (POLR2I), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9409616] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 8265347] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8265347] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hRPB14.5; RPB9	hRPB14.5; RPB9
Homo sapiens	RefSeq	XR_017251.2	ILMN_165610	LOC389386	XR_017251.2	XR_017251.2		389386	169169618	XR_017251.2	LOC389386		ILMN_3215715	0004570164	A	1126	GCCACCACCTTAACAGGTGTCATAGATGTAGCTTTGGGGTCAGGTGCCAC	6	+	36750631-36750680	6p21.31a	PREDICTED: Homo sapiens misc_RNA (LOC389386), partial miscRNA.					
Homo sapiens	RefSeq	XR_037128.1	ILMN_343852	LOC100132960	XR_037128.1	XR_037128.1		100132960	169161200	XR_037128.1	LOC100132960		ILMN_3242734	0002350632	S	218	CCCTGGTAGGCCCACAACTTCCCAAAGCCAAGCTCCGCAGGCCCAGCTCA	1	-	220712566-220712615	1q41e	PREDICTED: Homo sapiens misc_RNA (LOC100132960), miscRNA.					
Homo sapiens	RefSeq	XM_933667.1	ILMN_34886	LOC646509	XM_933667.1	XM_933667.1		646509	88953664	XM_933667.1	LOC646509	XP_938760.1	ILMN_1714458	0006520086	S	943	GCTGGGAGCAGAGCTAGCCGAGTAGGGCGCCCGGCTGTCAAAACTGGCCG	2	+	128360414-128360463	2q14.3e	PREDICTED: Homo sapiens hypothetical protein LOC646509 (LOC646509), mRNA.					
Homo sapiens	RefSeq	NM_001025238.1	ILMN_26489	TSPAN4	NM_001025238.1	NM_001025238.1		7106	68800023	NM_001025238.1	TSPAN4	NP_001020409.1	ILMN_2340027	0000540619	A	756	AGATCCTGGGCCTGACCTTCGCCATGACCATGTACTGCCAAGTGGTCAAG	11	+	855736-855785	11p15.5c	Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 6, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9360996] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9360996] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9360996] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NAG-2; NAG2; TETRASPAN; TM4SF7; TSPAN-4	NAG-2; NAG2; TETRASPAN; TM4SF7; TSPAN-4
Homo sapiens	RefSeq	NM_019025.2	ILMN_14770	SMOX	NM_175842.1	NM_175842.1		54498	28559079	NM_175842.1	SMOX	NP_787036.1	ILMN_1775380	0000270068	A	2017	CCCGTGCCCCCACTTGCCTACCCTCTGTCCTGCCTTGTTATTGTAAGTGC	20	+	4116271-4116320	20p13b	Homo sapiens spermine oxidase (SMOX), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]	PAO; PAOh1; dJ779E11.1; SMO; MGC1010; C20orf16; FLJ20746	PAO; PAOh1; dJ779E11.1; SMO; C20orf16; MGC1010; FLJ20746
Homo sapiens	RefSeq	NM_175842.1	ILMN_14770	SMOX	NM_175842.1	NM_175842.1		54498	28559079	NM_175842.1	SMOX	NP_787036.1	ILMN_2280707	0006580072	I	1596	GCCTGGTCACCTTTTCTCTTCCAAGTGCCCAGAACAGCCCCTGGATGCTA	20	+	4115413-4115462	20p13b	Homo sapiens spermine oxidase (SMOX), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging [goid 46208] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]	PAO; PAOh1; dJ779E11.1; SMO; MGC1010; C20orf16; FLJ20746	PAO; PAOh1; dJ779E11.1; SMO; MGC1010; C20orf16; FLJ20746
Homo sapiens	RefSeq	XM_498648.2	ILMN_42904	LOC440389	XM_498648.3	XM_498648.3		440389	113426162	XM_498648.3	LOC440389	XP_498648.2	ILMN_1730136	0006560707	S	598	TCCATTCTTGGAATTCAGCTCCTTGCCCTTCTCTGTGACCCCGGATCGCG	16	-	78312747-78312796	16q23.2a	PREDICTED: Homo sapiens similar to hCG2045623 (LOC440389), mRNA.					
Homo sapiens	RefSeq	XM_939929.1	ILMN_38239	LOC650841	XM_939929.1	XM_939929.1		650841	89039109	XM_939929.1	LOC650841	XP_945022.1	ILMN_1681463	0005080719	S	61	TTAGTGAAGCTGATGGCTACAGTTACACGGAAGATAGAAAACTTGATGTG					PREDICTED: Homo sapiens similar to CCR4-NOT transcription complex, subunit 6-like isoform 1 (LOC650841), mRNA.					
Homo sapiens	RefSeq	XM_001724178.1	ILMN_349956	LOC100128172	XM_001724178.1	XM_001724178.1		100128172	169214507	XM_001724178.1	LOC100128172	XP_001724230.1	ILMN_3270248	0006480047	M	9	ACTCGCACACTCAGGCACATGCACACTCGGATGCGTGCACACACGTGCAT	20	-	61074125-61074174	20q13.33d	PREDICTED: Homo sapiens hypothetical protein LOC100128172 (LOC100128172), mRNA.					
Homo sapiens	RefSeq	NM_145080.2	ILMN_27090	NSMCE1	NM_145080.3	NM_145080.3		197370	94721323	NM_145080.3	NSMCE1	NP_659547.2	ILMN_1697962	0002940020	S	797	CTACTGGCCCCACGAGATCCCAAAAGTCTTCGACCCTGAGAAGGAGAGGG	16	-	27236530-27236557:27237047-27237068	16p12.1a	Homo sapiens non-SMC element 1 homolog (S. cerevisiae) (NSMCE1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NSE1	NSE1
Homo sapiens	RefSeq	XM_001715331.1	ILMN_340185	LOC730105	XM_001715331.1	XM_001715331.1		730105	169207414	XM_001715331.1	LOC730105	XP_001715383.1	ILMN_3300301	0006760598	M	293	GCCTCTCTCCTAGCTTCTGGTGGTTGCTTGCAATCTTTGGAGTTCCCGGC				14q31.1d	PREDICTED: Homo sapiens hypothetical LOC730105 (LOC730105), mRNA.					
Homo sapiens	RefSeq	XR_042510.1	ILMN_338102	LOC100131243	XR_042510.1	XR_042510.1		100131243	169167110	XR_042510.1	LOC100131243		ILMN_3202942	0003420209	A	743	CCTTCACCCACAGGGGGGTACACAGCCTGGATGGCAGGGAAATAGACCGT					PREDICTED: Homo sapiens misc_RNA (LOC100131243), miscRNA.					
Homo sapiens	RefSeq	XR_042510.1	ILMN_338102	LOC100131243	XR_042510.1	XR_042510.1		100131243	169167110	XR_042510.1	LOC100131243		ILMN_3231183	0007650274	I	2379	AGGCTGACTCGAGGAACTTTTGCACCCGGAGAGGCCGCCAAGAGGCCGGA					PREDICTED: Homo sapiens misc_RNA (LOC100131243), miscRNA.					
Homo sapiens	RefSeq	NM_153750.1	ILMN_4794	C21ORF81	NM_153750.1	NM_153750.1		114035	24371249	NM_153750.1	C21orf81	NP_715631.1	ILMN_1767805	0000290762	A	467	CGGGGAGGTGAAAAGGTGACAGGGAGCTGCCTCCTCTCAAGAGCAGTTGG	21	-	14274120-14274169	21q11.2b-q11.2c	Homo sapiens chromosome 21 open reading frame 81 (C21orf81), mRNA.					
Homo sapiens	RefSeq	NM_153750.1	ILMN_4794	C21ORF81	NM_153750.1	NM_153750.1		114035	24371249	NM_153750.1	C21orf81	NP_715631.1	ILMN_1793572	0001430484	I	750	GTCCCCAAGAAAGTGTCAGAGCCTTTACGTGGACCTTCCCATGGAAAAGG	21	-	14248286-14248335	21q11.2b-q11.2c	Homo sapiens chromosome 21 open reading frame 81 (C21orf81), mRNA.					
Homo sapiens	RefSeq	NM_012427.4	ILMN_30002	KLK5	NM_012427.4	NM_012427.4		25818	117306170	NM_012427.4	KLK5	NP_036559.1	ILMN_2264029	0006620427	I	142	AAGTGAGACCTGGTGAGGGTGGCTCAGCAGGCAGGGAAGGAGAGGTGTCT	19	-	56147965-56148014	19q13.33d	Homo sapiens kallikrein-related peptidase 5 (KLK5), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10608802] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 10514489] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11054574] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 10608802] [evidence TAS]	KLKL2; KLK-L2; SCTE	KLKL2; KLK-L2; SCTE
Homo sapiens	RefSeq	NM_012427.4	ILMN_30002	KLK5	NM_012427.4	NM_012427.4		25818	117306170	NM_012427.4	KLK5	NP_036559.1	ILMN_2353054	0003170687	A	1367	TGGACTCAGGGTCTGCTTCCCCCACATTGGGCTGACCGTGTCTCTCTAGT	19	-	56138517-56138566	19q13.33d	Homo sapiens kallikrein-related peptidase 5 (KLK5), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10608802] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 10514489] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11054574] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 10608802] [evidence TAS]	KLKL2; KLK-L2; SCTE	KLKL2; KLK-L2; SCTE
Homo sapiens	RefSeq	XM_933068.1	ILMN_34975	LOC643980	XM_933068.1	XM_933068.1		643980	89029463	XM_933068.1	LOC643980	XP_938161.1	ILMN_1777977	0006520017	I	934	AAGTGCCAGATTTTGATAATCACCAGCCGCTCATTCAAGTCCTATGTTGG	9	-	67918271-67918320		PREDICTED: Homo sapiens similar to FRG1 protein (FSHD region gene 1 protein), transcript variant 2 (LOC643980), mRNA.					
Homo sapiens	RefSeq	XR_017484.1	ILMN_174803	LOC645715	XR_017484.1	XR_017484.1		645715	113414414	XR_017484.1	LOC645715		ILMN_3213573	0004050435	A	1175	GTCTGATGATGCTGCCATCATTGACATGGTTCCTGGCAAGCCCATGTGTG	3	+	39376214-39376263	3p22.1c	PREDICTED: Homo sapiens misc_RNA (LOC645715), miscRNA.					
Homo sapiens	RefSeq	NM_133637.1	ILMN_26510	DQX1	NM_133637.1	NM_133637.1		165545	19525734	NM_133637.1	DQX1	NP_598376.1	ILMN_1770502	0007510020	S	2148	GGAAGGAATGGCAGATTCTACAGCAGGGAGCAAATCATCCTCAGCCCAGG	2	-	74599108-74599157	2p13.1b	Homo sapiens DEAQ box polypeptide 1 (RNA-dependent ATPase) (DQX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ23757	FLJ23757
Homo sapiens	RefSeq	NM_006911.2	ILMN_28164	RLN1	NM_006911.2	NM_006911.2		6013	20143931	NM_006911.2	RLN1	NP_008842.1	ILMN_1796775	0003310731	S	609	GACGACCCTACGTGGCACTGTTTGAGAAATGTTGCCTAATTGGTTGTACC	9	-	5335277-5335326	9p24.1c	Homo sapiens relaxin 1 (RLN1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 6298628] [evidence NAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 6298628] [evidence NAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 6298628] [evidence TAS]	bA12D24.3.2; bA12D24.3.1; H1; RLXH1	bA12D24.3.2; bA12D24.3.1; H1; RLXH1
Homo sapiens	RefSeq	NM_024038.2	ILMN_24334	C19ORF43	NM_024038.2	NM_024038.2		79002	34147352	NM_024038.2	C19orf43	NP_076943.1	ILMN_1784299	0001470358	S	434	GCCCTCAAGACGGGAATAGTAGCCAAGAAGCAGAAGACGGAGGATGAGGT	19	-	12841880-12841882:12842158-12842204	19p13.13c	Homo sapiens chromosome 19 open reading frame 43 (C19orf43), mRNA.				MGC2803	MGC2803
Homo sapiens	RefSeq	NM_024038.2	ILMN_24334	C19ORF43	NM_024038.2	NM_024038.2		79002	34147352	NM_024038.2	C19orf43	NP_076943.1	ILMN_3251733	0006580202	S	650	CAGCGGCAGCGGCGACAGCCTTCCCTGAGAGGACTTAAAAGCAGAAGGAA	19	-	12841664-12841713	19p13.13c	Homo sapiens chromosome 19 open reading frame 43 (C19orf43), mRNA.				MGC2803	MGC2803
Homo sapiens	RefSeq	XM_938909.1	ILMN_176820	CCS	XM_001129630.1	XM_001129630.1		9973	113422969	XM_001129630.1	CCS	XP_001129630.1	ILMN_1748407	0002750630	I	1438	CTGCCTGGGATTGAAGAGATGCTCCCGAATCCTCCTAATGCATCCCCCTG				11q13.1e	PREDICTED: Homo sapiens copper chaperone for superoxide dismutase (CCS), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9295278] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9726962] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9726962] [evidence IDA]	The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [pmid 9295278] [evidence TAS]; The directed movement of copper (Cu) ions within a cell [goid 15680] [pmid 9726962] [evidence TAS]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered [goid 51353] [evidence IEA]	Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [pmid 9726962] [evidence TAS]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 9726962] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9726962] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NR_030636.1	ILMN_388204	MIR940	NR_030636.1	NR_030636.1		100126328	262206241	NR_030636.1	MIR940		ILMN_3309219	0005860484	S	21	AGGAGCGGGGCCTGGGCAGCCCCGTGTGTTGAGGAAGGAAGGCAGGGCCC				16p13.3d	Homo sapiens microRNA 940 (MIR940), microRNA.					
Homo sapiens	RefSeq	NM_198284.1	ILMN_173528	LOC729021	XR_015834.1	XR_015834.1		729021	113415714	XR_015834.1	LOC729021		ILMN_1809173	0002750678	S	4370	CTCTCCGGGTGCAAAAGTTCCTCGAGTCAGCCTCTCCAGGCCCAGCTCCT	4	+	119774245-119774294	4q26f	PREDICTED: Homo sapiens hypothetical protein LOC729021 (LOC729021), mRNA.					
Homo sapiens	RefSeq	NM_005899.2	ILMN_16223	NBR1	NM_005899.3	NM_005899.3		4077	112382228	NM_005899.3	NBR1	NP_005890.2	ILMN_1735333	0004390347	I	1	GGATAGCGGCAGAGCCGGTAGCGGACGGTCCTTGCATTGGCCTCCGGCAG	17	+	38576772-38576821	17q21.31a	Homo sapiens neighbor of BRCA1 gene 1 (NBR1), transcript variant 1, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0049; MIG19; M17S2; 1A1-3B	KIAA0049; MIG19; M17S2
Homo sapiens	RefSeq	NM_016346.2	ILMN_9678	NR2E3	NM_016346.2	NM_016346.2		10002	30581148	NM_016346.2	NR2E3	NP_057430.1	ILMN_1751882	0006590379	I	1776	GCCAGAAAAGTACCCTAGGACCAGCCCGTTCAGGACTTTGAATGCCAGCC	15	+	69893997-69894046	15q23b	Homo sapiens nuclear receptor subfamily 2, group E, member 3 (NR2E3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10220376] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10220376] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10220376] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [pmid 10220376] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of rhodopsin gene expression [goid 45872] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	rd7; ESCS; PNR; RNR; MGC49976	rd7; ESCS; PNR; RNR; MGC49976
Homo sapiens	RefSeq	NM_005578.2	ILMN_179565	LPP	NM_005578.2	NM_005578.2		4026	59853294	NM_005578.2	LPP	NP_005569.1	ILMN_1651254	0006350711	S	6175	GTGCCTCAAGTCCATTTCTTGGGATCGCTCGTTTGGTGCACTCTCGTGGG	3	+	190079051-190079100	3q28a	Homo sapiens LIM domain containing preferred translocation partner in lipoma (LPP), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_929330.1	ILMN_38986	LOC643903	XM_929330.1	XM_929330.1		643903	89024709	XM_929330.1	LOC643903	XP_934423.1	ILMN_1680206	0004670086	S	101	CAGAGCTTTTCTTTACTGAGAGGACCCCTTGGTTCCACCAATTCCCCCAA	7	+	27122258-27122307		PREDICTED: Homo sapiens hypothetical protein LOC643903 (LOC643903), mRNA.					
Homo sapiens	RefSeq	NM_184086.1	ILMN_9000	TRIM55	NM_184086.1	NM_184086.1		84675	34878843	NM_184086.1	TRIM55	NP_908974.1	ILMN_2347622	0003800500	A	1525	TGATTCTGAGCCAGCTCGCCATATCTTCTCCTTTTCCTGGTTGAACTCCC	8	+	67086768-67086817	8q13.1b	Homo sapiens tripartite motif-containing 55 (TRIM55), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 21140140] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 11243782] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 21140140] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11243782] [evidence NAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 21140140] [evidence NAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 11243782] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MURF-2; RNF29	MURF-2; RNF29
Homo sapiens	RefSeq	XM_943818.1	ILMN_34551	LOC649639	XM_943818.1	XM_943818.1		649639	89059241	XM_943818.1	LOC649639	XP_948911.1	ILMN_1783735	0004880113	S	243	GGAATATGGATATGAGTCATGGAACTCTGGGGCTATGTTGCTGCCAGGCC					PREDICTED: Homo sapiens hypothetical protein LOC649639 (LOC649639), mRNA.					
Homo sapiens	RefSeq	NM_016101.3	ILMN_28300	NIP7	NM_016101.3	NM_016101.3		51388	59710091	NM_016101.3	NIP7	NP_057185.1	ILMN_1704305	0006280482	S	1959	CAGAGGCCACGACATAAAAATTCAGTCCCTTTGTCCTTCCCCGTGCCTCC	16	+	67934285-67934334	16q22.1d	Homo sapiens nuclear import 7 homolog (S. cerevisiae) (NIP7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of the mature ribosome and of its subunits [goid 42255] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17643419] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14660641] [evidence IPI]	HSPC031; FLJ10296; CGI-37; KD93	HSPC031; FLJ10296; KD93; CGI-37
Homo sapiens	RefSeq	NM_054112.1	ILMN_23261	DEFB118	NM_054112.1	NM_054112.1		117285	16905372	NM_054112.1	DEFB118	NP_473453.1	ILMN_1731598	0004200246	S	381	GTTCACCATAGCTCATGACTTCCTCTCGGCTATCACTCACCCCTGTCCTC	20	+	29424617-29424634:29424635-29424666	20q11.21a	Homo sapiens defensin, beta 118 (DEFB118), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 11564719] [evidence NAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 11564719] [evidence NAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 10588992] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 10588992] [evidence TAS]		C20orf63; ESC42; DEFB-18; dJ1018D12.3	C20orf63; ESC42; DEFB-18; dJ1018D12.3
Homo sapiens	RefSeq	XM_930375.1	ILMN_37545	LOC647306	XM_930375.1	XM_930375.1		647306	89036799	XM_930375.1	LOC647306	XP_935468.1	ILMN_1772277	0002190692	S	55	GAGAAAAAAGTGGTCAAGGAGTTTGGATCGGAGCCTCAGGCAGGTCCCGC	13	+	79712250-79712282:79714517-79714533		PREDICTED: Homo sapiens hypothetical protein LOC647306 (LOC647306), mRNA.					
Homo sapiens	Unigene	Hs.279842	ILMN_84472	HS.279842	Hs.279842		Hs.279842		48734737	BC071749			ILMN_1901198	0006960300	S	798	CCCATGTCTGGATCTCTCTTTGGCTGAGGCAGCTTTATTTCCTACGGAGT	1	+	22229977-22230017:22230024-22230032		Homo sapiens HSPC157 protein, mRNA (cDNA clone IMAGE:6672800), partial cds					
Homo sapiens	RefSeq	NM_013453.2	ILMN_28893	SPANXA2	NM_145662.2	NM_145662.2		728712	49619235	NM_145662.2	SPANXA2	NP_663695.1	ILMN_1653415	0006960653	S	124	AACGAGATGATGCCGGAGACCCCAACTGGGGACTCAGACCCGCAACCTGC	X	+	140505621-140505632:140506280-140506317	Xq27.2a	Homo sapiens SPANX family, member A2 (SPANXA2), mRNA.				SPANX; SPANXA	SPAN-Xb; SPANX-C; SPANX; SPANXD; SPANXA2; NAP-X; SPANX-D; SPANXC; SPANX-A2; SPAN-Xa
Homo sapiens	RefSeq	NM_130772.1	ILMN_16143	S100Z	NM_130772.1	NM_130772.1		170591	18640743	NM_130772.1	S100Z	NP_570128.1	ILMN_2054707	0000610204	S	596	TACTTTGTAGAACAATTGAAGAAGAAAGGAAAATAAAGGTAAGTAATAAG	5	+	76209379-76209413:76209414-76209428	5q13.3d	Homo sapiens S100 calcium binding protein Z (S100Z), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	S100-zeta; Gm625	S100-zeta; Gm625
Homo sapiens	RefSeq	XM_935840.1	ILMN_31152	LOC653832	XM_935840.1	XM_935840.1		653832	89027443	XM_935840.1	LOC653832	XP_940933.1	ILMN_1678554	0001430148	I	509	TTGCATACAGTAAAACAATAACTTCTGGCTATATTTGTAGAACATCTTTA					PREDICTED: Homo sapiens similar to hypothetical protein FLJ36166, transcript variant 4 (LOC653832), mRNA.					
Homo sapiens	RefSeq	NM_002116.5	ILMN_7985	HLA-A	NM_002116.5	NM_002116.5		3105	52426770	NM_002116.5	HLA-A	NP_002107.3	ILMN_1671054	0002350066	S	1016	GAAAAGGAGGGAGTTACACTCAGGCTGCAAGCAGTGACAGTGCCCAGGGC	6	+	29912839-29912868:29913011-29913030	6p21.33b	Homo sapiens major histocompatibility complex, class I, A (HLA-A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 15569716] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [pmid 15569716] [evidence EXP]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 6609814] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2437024] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2478623] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2715640] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1431115] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8188325] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 6609814] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2437024] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2478623] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2715640] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1431115] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8188325] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12414957] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 6609814] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2437024] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2478623] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2715640] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 1431115] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 8188325] [evidence NAS]		
Homo sapiens	RefSeq	NM_002116.5	ILMN_7985	HLA-A	NM_002116.5	NM_002116.5		3105	52426770	NM_002116.5	HLA-A	NP_002107.3	ILMN_2203950	0003400438	S	1166	CCCTGACTTTGTTTCTGCAAAGGCACCTGCATGTGTCTGTGTTCGTGTAG	6	+	29913300-29913349	6p21.33b	Homo sapiens major histocompatibility complex, class I, A (HLA-A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 15569716] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [pmid 15569716] [evidence EXP]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 6609814] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2437024] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2478623] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2715640] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1431115] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8188325] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 6609814] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2437024] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2478623] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2715640] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1431115] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8188325] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12414957] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 6609814] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2437024] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2478623] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2715640] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 1431115] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 8188325] [evidence NAS]		
Homo sapiens	RefSeq	NM_198482.1	ILMN_13507	SH2D6	NM_198482.1	NM_198482.1		284948	38348279	NM_198482.1	SH2D6	NP_940884.1	ILMN_1749744	0001090441	A	593	CATGGTCCAGCACTTCATGTGGCACCCTCTGCCCCTTGTGGACAGACACA	2	+	85517120-85517169	2p11.2g	Homo sapiens SH2 domain containing 6 (SH2D6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ35993	FLJ35993
Homo sapiens	RefSeq	NR_029610.1	ILMN_388475	MIR34A	NR_029610.1	NR_029610.1		407040	262206221	NR_029610.1	MIR34A		ILMN_3308455	0002690681	S	56	AAGGAAGCAATCAGCAAGTATACTGCCCTAGAAGTGCTGCACGTTGTGGG				1p36.23a	Homo sapiens microRNA 34a (MIR34A), microRNA.					
Homo sapiens	RefSeq	XM_001714782.1	ILMN_336635	LOC100134002	XM_001714782.1	XM_001714782.1		100134002	169206161	XM_001714782.1	LOC100134002	XP_001714834.1	ILMN_3237008	0006840646	S	314	CCTGCGATGGGGGCCCTGAGAGCCGGGAGCGGAAGAGGGGCTGCCTCTGA					PREDICTED: Homo sapiens hypothetical LOC100134002 (LOC100134002), mRNA.					
Homo sapiens	RefSeq	XM_001724550.1	ILMN_333869	LOC100132990	XM_001724550.1	XM_001724550.1		100132990	169167025	XM_001724550.1	LOC100132990	XP_001724602.1	ILMN_3274246	0004810630	M	31	ATAGAGGCAAGAGATATAATGCTTTACCTGCAAAGAGCTATAAATACAGC				4q23b	PREDICTED: Homo sapiens similar to PRO0633 (LOC100132990), mRNA.					
Homo sapiens	RefSeq	NM_017946.2	ILMN_18132	FKBP14	NM_017946.2	NM_017946.2		55033	51593093	NM_017946.2	FKBP14	NP_060416.1	ILMN_2150294	0004150753	S	1942	TTCTGTCTCATCAAAAACTGAAGTTAGCTGGGTGTGGTGGCTCATGCCTG	7	-	30053139-30053188	7p15.1b	Homo sapiens FK506 binding protein 14, 22 kDa (FKBP14), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FLJ20731; FKBP22	FLJ20731; FKBP22
Homo sapiens	RefSeq	NM_017946.2	ILMN_18132	FKBP14	NM_017946.2	NM_017946.2		55033	51593093	NM_017946.2	FKBP14	NP_060416.1	ILMN_1665243	0006100411	S	1670	GCTACCTAGGACTTAAGCTGATGAAGCTTGGCTCCTAGTGATTGGTGGCC	7	-	30053411-30053460	7p15.1b	Homo sapiens FK506 binding protein 14, 22 kDa (FKBP14), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FLJ20731; FKBP22	FLJ20731; FKBP22
Homo sapiens	RefSeq	XM_942338.1	ILMN_34141	LOC652715	XM_942338.1	XM_942338.1		652715	89063942	XM_942338.1	LOC652715	XP_947431.1	ILMN_1712601	0004200600	S	17	GTGATACGCAGGATCCGAAGGCGACACTGGGTAGAAAAAGAGAGGATGAC					PREDICTED: Homo sapiens similar to Grp94 neighboring nucleotidase isoform 3 (LOC652715), mRNA.					
Homo sapiens	RefSeq	NM_001012505.1	ILMN_20586	FOXP1	NM_032682.4	NM_032682.4		27086	60498985	NM_032682.4	FOXP1	NP_116071.2	ILMN_1768248	0006100220	A	565	TTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCG	3	-	71542680-71542706:71625267-71625289	3p14.1a	Homo sapiens forkhead box P1 (FOXP1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments [goid 2329] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments [goid 2329] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	12CC4; HSPC215; MGC99551; QRF1; hFKH1B; MGC12942; FLJ23741; MGC88572	MGC99551; QRF1; hFKH1B; MGC88572; 12CC4; HSPC215; MGC12942; FLJ23741
Homo sapiens	RefSeq	NM_032682.4	ILMN_20586	FOXP1	NM_032682.4	NM_032682.4		27086	60498985	NM_032682.4	FOXP1	NP_116071.2	ILMN_1682495	0002760224	I	5578	CGATGTGTCTGTGTGAATCTTTGTCTTTTTTGGGGGAGGGCAGAGGGCGG	3	-	71089415-71089464	3p14.1a	Homo sapiens forkhead box P1 (FOXP1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments [goid 2329] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments [goid 2329] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	12CC4; HSPC215; MGC99551; QRF1; hFKH1B; MGC12942; FLJ23741; MGC88572	MGC99551; QRF1; hFKH1B; MGC88572; 12CC4; HSPC215; MGC12942; FLJ23741
Homo sapiens	RefSeq	NM_032682.4	ILMN_20586	FOXP1	NM_032682.4	NM_032682.4		27086	60498985	NM_032682.4	FOXP1	NP_116071.2	ILMN_2250923	0000020162	I	5818	AGAATATTGGATGACATTTCCTGACATGTGGGAGGGAGAAACTCCCTAAC	3	-	71089175-71089224	3p14.1a	Homo sapiens forkhead box P1 (FOXP1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments [goid 2329] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells [goid 2053] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments [goid 2329] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of immunoglobulin production [goid 2639] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process whose specific outcome is the progression of smooth muscle over time, from its formation to the mature structure [goid 48745] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	12CC4; HSPC215; MGC99551; QRF1; hFKH1B; MGC12942; FLJ23741; MGC88572	MGC99551; QRF1; hFKH1B; MGC88572; 12CC4; HSPC215; MGC12942; FLJ23741
Homo sapiens	RefSeq	NM_001013696.1	ILMN_21125	LOC439985	NM_001013696.1	NM_001013696.1		439985	61966842	NM_001013696.1	LOC439985	NP_001013718.1	ILMN_2139740	0004200279	S	2005	CTGGTAGCCCCTTCCGACGCCTTTGCCTCCCAGAAAATCACAACAAAGCG	10	+	76827434-76827483	10q22.2c	Homo sapiens hypothetical gene supported by AK125693 (LOC439985), mRNA.					
Homo sapiens	RefSeq	NM_001039.2	ILMN_23990	SCNN1G	NM_001039.3	NM_001039.3		6340	148839327	NM_001039.3	SCNN1G	NP_001030.2	ILMN_1814215	0000670100	S	3015	GCCTGTCCCTCACCAACAAGCCAACTGCCACAGATGACCCACTTCATACC	16	+	23135217-23135266	16p12.1c	Homo sapiens sodium channel, nonvoltage-gated 1, gamma (SCNN1G), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8640238] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 8521520] [evidence TAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 8640238] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11244092] [evidence IPI];  [goid 15280] [pmid 8640238] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ENaCg; ENaCgamma; PHA1; SCNEG	ENaCg; ENaCgamma; PHA1; SCNEG
Homo sapiens	RefSeq	NM_139058.1	ILMN_162588	ARX	NM_139058.1	NM_139058.1		170302	24497588	NM_139058.1	ARX	NP_620689.1	ILMN_1724162	0004070020	S	1903	CTGCCCCTGCTACTGCCAACCTCGCTCCAACTCCAACATCCACTCTCTCT	X	-	24932444-24932493	Xp21.3d	Homo sapiens aristaless related homeobox (ARX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The progression of the globus pallidus over time from its initial formation until its mature state. The globus pallidus is one of the basal ganglia involved with control of voluntary movement in the brain [goid 21759] [evidence IEA]; The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration [goid 21800] [evidence IEA]; The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex [goid 21853] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MRX43; MRX29; MRX32; MRXS1; ISSX; MRX38; PRTS; MRX54; MRX36; MRX33	MRX43; MRX29; MRX32; MRXS1; ISSX; MRX38; PRTS; MRX54; MRX36; MRX33
Homo sapiens	RefSeq	NM_198828.1	ILMN_13686	MAST4	NM_198828.2	NM_198828.2		375449	148727304	NM_198828.2	MAST4	NP_942123.1	ILMN_1738438	0004260309	S	1010	GGTCAAACGCCCTGTGTGTCCAAATGCTGGGAGAACATCACCCCTTGGAT	5	+	65928270-65928319	5q12.3c	Homo sapiens microtubule associated serine/threonine kinase family member 4 (MAST4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	DKFZp686E18148; KIAA0303; FLJ33039; DKFZp686N1467; FLJ16540	
Homo sapiens	Unigene	Hs.564701	ILMN_117318	HS.564701	Hs.564701		Hs.564701		11591851	BF508553			ILMN_1828160	0004830598	S	585	CCTGATGAACTCCCCTTGTTCTTGTCAATTTCCACTCAGTCCTCATGGAC	14	+	53135017-53135066		UI-H-BI4-aoo-a-07-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3085356 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001997.3	ILMN_3073	FAU	NM_001997.3	NM_001997.3		2197	71565157	NM_001997.3	FAU	NP_001988.1	ILMN_1664614	0006770025	S	285	GAGGCCCTGACTACCCTGGAAGTAGCAGGCCGCATGCTTGGAGGTAAAGT	11	-	64888501-64888508:64888972-64889013	11q13.1c	Homo sapiens Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (FAU), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8395683] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 8395683] [evidence TAS]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8395683] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fub1; MNSFbeta; FAU1; RPS30; FLJ22986; Fubi	Fub1; MNSFbeta; FAU1; RPS30; FLJ22986; Fubi
Homo sapiens	RefSeq	XM_942509.1	ILMN_34282	LOC652826	XM_942509.2	XM_942509.2		652826	113431043	XM_942509.2	LOC652826	XP_947602.1	ILMN_1800131	0006350148	S	1	ATGATTCCTTGGCACGAGGCTCAGGATGAGATCCCAGCACTGTCCGTGTC					PREDICTED: Homo sapiens similar to 26S protease regulatory subunit 6B (MIP224) (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (LOC652826), mRNA.					
Homo sapiens	RefSeq	NM_080649.1	ILMN_1992	APEX1	NM_080649.1	NM_080649.1		328	18375504	NM_080649.1	APEX1	NP_542380.1	ILMN_1661886	0006510053	A	1149	GTTACCTGCATTGTGTGACAGCAAGATCCGTTCCAAGGCCCTCGGCAGTG	14	+	19995423-19995472	14q11.2b	Homo sapiens APEX nuclease (multifunctional DNA repair enzyme) 1 (APEX1), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9119221] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9207062] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11250913] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10559261] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12524539] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 12524539] [evidence TAS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 12524539] [evidence IDA]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 11286553] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 1380454] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 51101] [pmid 9119221] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11286553] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9119221] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 7961715] [evidence TAS]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [pmid 9119221] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks [goid 4520] [pmid 1722334] [evidence TAS]; Catalysis of the endonucleolytic cleavage of RNA in RNA-DNA hybrids to 5'-phosphomonoesters [goid 4523] [pmid 11286553] [evidence TAS]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [pmid 9119221] [evidence TAS]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [pmid 10805771] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15518571] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12524539] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 11286553] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [pmid 9119221] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	APEX; REF1; APE1; APE-1; HAP1; APE; APX; REF-1; APEN	APEX; REF1; APE1; APE-1; HAP1; APE; APX; REF-1; APEN
Homo sapiens	RefSeq	NM_003338.3	ILMN_24593	UBE2D1	NM_003338.3	NM_003338.3		7321	33149307	NM_003338.3	UBE2D1	NP_003329.1	ILMN_1787988	0002680373	S	2192	GCAGTAGCTGTAGAAGTATGTAAGAATATGTGATGGGTGTAGTCATTAGC	10	+	59800056-59800105	10q21.1e	Homo sapiens ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) (UBE2D1), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 16275645] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 16275645] [evidence IDA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [pmid 16275645] [evidence IDA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBCH5; UBCH5A; E2(17)KB1; SFT; UBC4/5	UBCH5; UBCH5A; E2(17)KB1; SFT; UBC4/5
Homo sapiens	RefSeq	NM_145046.2	ILMN_20160	CALR3	NM_145046.2	NM_145046.2		125972	34222181	NM_145046.2	CALR3	NP_659483.1	ILMN_2167223	0000150564	S	946	GAGAACATTGGTGCCATTGGCCTGGAGCTTTGGCAGGTGAGATCTGGAAC	19	-	16452503-16452517:16454261-16454295	19p13.11f	Homo sapiens calreticulin 3 (CALR3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	FLJ25355; MGC26577; CRT2	FLJ25355; MGC26577; CRT2
Homo sapiens	RefSeq	NM_021826.4	ILMN_10466	FASTKD5	NM_021826.4	NM_021826.4		60493	40806183	NM_021826.4	FASTKD5	NP_068598.1	ILMN_1733377	0006650220	S	2487	GCTCGGCTTGGCTACCGTGTGGTAGAGTTATCCTACTGGGAATGGCTCCC	20	-	3127491-3127540	20p13c	Homo sapiens FAST kinase domains 5 (FASTKD5), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ13149; dJ1187M17.5	FLJ13149; dJ1187M17.5
Homo sapiens	RefSeq	XR_042006.1	ILMN_353108	LOC728975	XR_042006.1	XR_042006.1		728975	169202940	XR_042006.1	LOC728975		ILMN_3306869	0006040040	M	1516	ATGGGGTCCTGCTGTGTTACTCAGGCTGGTCATGAACTCCTGGGCTCAAG				11q13.1c	PREDICTED: Homo sapiens misc_RNA (LOC728975), miscRNA.					
Homo sapiens	RefSeq	XR_042006.1	ILMN_353108	LOC728975	XR_042006.1	XR_042006.1		728975	169202940	XR_042006.1	LOC728975		ILMN_3230241	0006220743	A	1134	GGTGTCCAGGGACAGAGAAGGGTGGTTTAAACTAGAGAGGTGGCAGGCAG				11q13.1c	PREDICTED: Homo sapiens misc_RNA (LOC728975), miscRNA.					
Homo sapiens	RefSeq	NM_207128.1	ILMN_26933	PAOX	NM_207128.1	NM_207128.1		196743	46397309	NM_207128.1	PAOX	NP_997011.1	ILMN_2363058	0004850538	A	1637	TTGAGCTGAGACACCAGATGCTCACGGAGATGCTGGACACATAAAGCAAG	10	+	135055128-135055177	10q26.3f	Homo sapiens polyamine oxidase (exo-N4-amino) (PAOX), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]	PAO; RP11-122K13.11; MGC45464; DKFZp434J245	PAO; RP11-122K13.11; MGC45464; DKFZp434J245
Homo sapiens	Unigene	Hs.446301	ILMN_93163	HS.446301	Hs.446301		Hs.446301		27847188	BX106903			ILMN_1866504	0004920338	S	327	GTCTTAGGCTGTGACATTCTTCTCCCATGTGGCCCAGGTTGTTCTGTGAT	10	+	124964221-124964270		BX106903 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998J154516, mRNA sequence					
Homo sapiens	RefSeq	XR_016287.1	ILMN_167016	LOC643332	XR_016287.1	XR_016287.1		643332	113424523	XR_016287.1	LOC643332		ILMN_3202002	0005360477	A	318	TGTACTGTAACCTCACAACTCCAAGTCCACAGAATATTTCAAACTGCAGG	14	+	20457957-20458006	14q11.2c	PREDICTED: Homo sapiens misc_RNA (LOC643332), miscRNA.					
Homo sapiens	RefSeq	XM_001722296.1	ILMN_347408	LOC100130966	XM_001722296.1	XM_001722296.1		100130966	169169265	XM_001722296.1	LOC100130966	XP_001722348.1	ILMN_3267345	0006760196	M	337	ACCGGTGCTCATCATGGCTGACAAAAAGCCCCAGGAAGGAGTCAAGACTA	6	-	109046144-109046181:109046182-109046193	6q21e	PREDICTED: Homo sapiens similar to SMT3 suppressor of mif two 3 homolog 2 (LOC100130966), mRNA.					
Homo sapiens	RefSeq	NM_001023563.1	ILMN_25977	ZNF805	NM_001023563.1	NM_001023563.1		390980	66793367	NM_001023563.1	ZNF805	NP_001018857.1	ILMN_2225348	0000240008	S	8394	GAGCAAACTCAGCAAAAGGCTCAAACCCAAGTCCAGAGGAAACCAGGCAC	19	+	62465008-62465057	19q13.43b	Homo sapiens zinc finger protein 805 (ZNF805), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686P08106	DKFZp686P08106
Homo sapiens	RefSeq	NM_138375.1	ILMN_26976	CABLES1	NM_138375.1	NM_138375.1		91768	24308407	NM_138375.1	CABLES1	NP_612384.1	ILMN_1653001	0004050411	S	2245	GCTGACTAAGGAGGCGGTGGCTCTTTCTTAACATTCCCACGTGCCCAGGG	18	+	19092389-19092438	18q11.2b	Homo sapiens Cdk5 and Abl enzyme substrate 1 (CABLES1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17101133] [evidence IDA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that modulates the frequency, rate or extent of the physical partitioning and separation of a cell into daughter cells [goid 51302] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11706030] [evidence IPI]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]	FLJ35924; HsT2563	FLJ35924; HsT2563
Homo sapiens	RefSeq	NM_001008271.1	ILMN_364760	SCXA	NM_001008271.1	NM_001008271.1		100129885	186972125	NM_001008271.1	SCXA	NP_001008272.1	ILMN_3240314	0005220044	S	350	TGCGCCTGGCCTCCAGCTACATCTCGCACCTGGGCAACGTGCTGCTGGCG	8	+	145490952-145491001	8q24.3g	Homo sapiens scleraxis homolog A (mouse) (SCXA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	XM_001725501.1	ILMN_346154	LOC649203	XM_001725501.1	XM_001725501.1		649203	169161840	XM_001725501.1	LOC649203	XP_001725553.1	ILMN_3250993	0004830053	M	18	ATTCACCGCCAGGACTGAGATGGTACAGGAAGGAAACGTGGAAGGTGCAT				1q23.1d	PREDICTED: Homo sapiens similar to hCG1795719 (LOC649203), mRNA.					
Homo sapiens	RefSeq	XM_001715536.1	ILMN_337792	LOC727945	XM_001715536.1	XM_001715536.1		727945	169169424	XM_001715536.1	LOC727945	XP_001715588.1	ILMN_3202552	0005810246	A	560	CCTGTGATCCTGAACATGACCCTCCACACCACTGTAGCAGAGGAGCAACC	6	-	64530382-64530431	6q12b	PREDICTED: Homo sapiens similar to hCG1651100 (LOC727945), mRNA.					
Homo sapiens	RefSeq	NM_005548.1	ILMN_15158	KARS	NM_005548.1	NM_005548.1		3735	5031814	NM_005548.1	KARS	NP_005539.1	ILMN_1777584	0005340291	S	1632	AAAACTTCTGTACTGCCCTGGAATATGGGCTGCCCCCCACAGCTGGCTGG	16	-	74220021-74220070	16q23.1a	Homo sapiens lysyl-tRNA synthetase (KARS), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9278442] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9278442] [evidence TAS]	The process of coupling lysine to lysyl-tRNA, catalyzed by lysyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6430] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys) [goid 4824] [pmid 9278442] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	KIAA0070; KARS2	KIAA0070; KARS2
Homo sapiens	RefSeq	NM_012308.1	ILMN_12629	FBXL11	NM_012308.1	NM_012308.1		22992	16306579	NM_012308.1	FBXL11	NP_036440.1	ILMN_3237966	0002510750	S	5970	TGGGGGACAGAGGAACCTGGGGAGTCCATCGCATGTCCTACAATCTGCTC	11	+	66781477-66781526	11q13.1f	Homo sapiens F-box and leucine-rich repeat protein 11 (FBXL11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15070733] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]	FBL7; JHDM1A; FBL11; KIAA1004; FLJ00115; DKFZP434M1735; CXXC8; LILINA; FLJ46431; KDM2A	FBL7; JHDM1A; FBL11; KIAA1004; FLJ00115; DKFZP434M1735; CXXC8; LILINA; FLJ46431; KDM2A
Homo sapiens	RefSeq	NM_003508.2	ILMN_27569	FZD9	NM_003508.2	NM_003508.2		8326	62865872	NM_003508.2	FZD9	NP_003499.1	ILMN_1704398	0006200132	S	2292	TATTGTTGCGTTCCTCTGGAAGCTGTGACTGGAATAAACCCCCGCGTGGC	7	+	72488336-72488385	7q11.23a	Homo sapiens frizzled homolog 9 (Drosophila) (FZD9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9147651] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9147651] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9147651] [evidence TAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4926] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with a member of the Wnt family of signaling molecules to initiate a change in cell activity [goid 42813] [pmid 9147651] [evidence TAS]	FZD3; CD349	FZD3; CD349
Homo sapiens	RefSeq	NM_138300.3	ILMN_3854	PYGO2	NM_138300.3	NM_138300.3		90780	56676333	NM_138300.3	PYGO2	NP_612157.1	ILMN_1695334	0005900474	S	2824	AGAGAAGACCCTGCTCTGGTGGAGCTGACAACCTTTGAGGCTGGGAGGAG	1	-	154929808-154929857	1q21.3e	Homo sapiens pygopus homolog 2 (Drosophila) (PYGO2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The process whose specific outcome is the progression of the lens over time, from its formation to the mature structure. The lens is a transparent structure in the eye through which light is focused onto the retina [goid 2088] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; The increase in size or mass of an entire organism, a part of an organism or a cell, where the increase in size or mass has the specific outcome of the progression of the organism over time from one condition to another [goid 48589] [evidence IEA]; The biological process whose specific outcome is the progression of the palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure. The palate is the partition that separates the nasal and oral cavities [goid 60021] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17113272] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	1190004M21Rik; FLJ33226	1190004M21Rik; FLJ33226
Homo sapiens	RefSeq	NR_002826.1	ILMN_16998	LOC401010	NR_002826.1	NR_002826.1		401010	84872108	NR_002826.1	LOC401010		ILMN_2137499	0000510274	S	2108	AGGAGGGCAAGGAGGACAGCAGCAACTCGGAGGATGGAGACCCAGATGCA	2	-	131916769-131916818	2q21.1d	Homo sapiens nucleolar complex associated 2 homolog (S. cerevisiae) pseudogene (LOC401010), non-coding RNA.					
Homo sapiens	RefSeq	NM_020977.2	ILMN_7744	ANK2	NM_020977.2	NM_020977.2		287	52426736	NM_020977.2	ANK2	NP_066187.2	ILMN_1776363	0004780437	A	7522	GCCAAAATAAGAGAGGCCGATGGTGAAACTTTTTGAGACACCCTATGGCC	4	+	114523964-114524013	4q26a	Homo sapiens ankyrin 2, neuronal (ANK2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12527750] [evidence IPI]	DKFZp686P0948; FLJ38277; DKFZp686M09125; LQT4	DKFZp686P0948; FLJ38277; DKFZp686M09125; LQT4
Homo sapiens	RefSeq	NR_024445.1	ILMN_369884	LOC100128003	NR_024445.1	NR_024445.1		100128003	212720759	NR_024445.1	LOC100128003		ILMN_3235239	0001450091	S	4165	CGGGCTGAGGGTAGCTCGTTTTCCTAACTTTGTGGACAGGCGTGGTTAGC	1	-	2120810-2120859	1p36.33a	Homo sapiens hypothetical protein LOC100128003 (LOC100128003), non-coding RNA.					
Homo sapiens	RefSeq	NM_017778.2	ILMN_11003	WHSC1L1	NM_017778.2	NM_017778.2		54904	13699812	NM_017778.2	WHSC1L1	NP_060248.2	ILMN_1697919	0005560497	I	3643	CTTCCCGCACAAATTCCACATAGAGGCCTTCCCATCCAGCTCTACGTGAT	8	-	38293394-38293443	8p12a	Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1), transcript variant short, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16682010] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [pmid 16682010] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence NAS]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [pmid 16682010] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	pp14328; DKFZp667H044; NSD3; FLJ20353; MGC126766; MGC142029	pp14328; DKFZp667H044; NSD3; FLJ20353; MGC126766; MGC142029
Homo sapiens	RefSeq	NM_023034.1	ILMN_11003	WHSC1L1	NM_017778.2	NM_017778.2		54904	13699812	NM_017778.2	WHSC1L1	NP_060248.2	ILMN_1666715	0000870689	A	1890	GCGGAAGAGGAAGAGCCACCGCCTGTTAAAATAGCCTGGAAAACTGCGGC	8	-	38306212-38306261	8p12a	Homo sapiens Wolf-Hirschhorn syndrome candidate 1-like 1 (WHSC1L1), transcript variant short, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16682010] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of methyl groups [goid 16571] [pmid 16682010] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence NAS]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [pmid 16682010] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	pp14328; DKFZp667H044; NSD3; FLJ20353; MGC126766; MGC142029	pp14328; DKFZp667H044; NSD3; FLJ20353; MGC126766; MGC142029
Homo sapiens	RefSeq	NM_152726.1	ILMN_8036	EFHA1	NM_152726.1	NM_152726.1		221154	22749442	NM_152726.1	EFHA1	NP_689939.1	ILMN_1738346	0001400682	S	1666	TGAGACCAAGGCCAGCATCAATTCCAGACATCTTCATGTTCCTAATAGGC	13	-	22066997-22067046	13q12.11c	Homo sapiens EF-hand domain family, member A1 (EFHA1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ34588; FLJ25016; 1110008L20Rik	FLJ34588; FLJ25016; 1110008L20Rik
Homo sapiens	RefSeq	NM_006889.2	ILMN_27064	CD86	NM_006889.2	NM_006889.2		942	29029570	NM_006889.2	CD86	NP_008820.1	ILMN_1672097	0004570368	I	20	GGGAGCTCGCAAATACTCCTTTTGGTTTATTCTTACCACCTTGCTTCTGT	3	+	123279459-123279508	3q13.33c	Homo sapiens CD86 antigen (CD28 antigen ligand 2, B7-2 antigen) (CD86), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7513726] [evidence NAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9915850] [evidence IC ]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7694363] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9915850] [evidence IC ]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 7513726] [evidence TAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 9915850] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the cytokine lymphotoxin A [goid 43017] [pmid 9915850] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [pmid 9915850] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-4 [goid 45404] [pmid 9915850] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation [goid 45630] [pmid 9915850] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 9915850] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9915850] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 9915850] [evidence NAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 9915850] [evidence NAS]	B7-2; LAB72; B70; MGC34413; CD28LG2	B7-2; LAB72; B70; MGC34413; CD28LG2
Homo sapiens	RefSeq	XM_499226.2	ILMN_44327	LOC402232	XM_499226.2	XM_499226.2		402232	88985499	XM_499226.2	LOC402232	XP_499226.2	ILMN_1767560	0004850692	S	495	GGGGAAGCCAGGATCATCTAGCCAACACGGGAATCTAGGGTCATCAACCC	5	+	147602647-147602696	5q33.1a	PREDICTED: Homo sapiens hypothetical LOC402232 (LOC402232), mRNA.					
Homo sapiens	RefSeq	NM_152933.1	ILMN_579	PPEF2	NM_152933.1	NM_152933.1		5470	23312381	NM_152933.1	PPEF2	NP_690910.1	ILMN_1733294	0005090364	I	2226	GGGCAGGAAACTAGACTTCTAGGTGACAAGGCAACAGGTTAGCTCTCACC	4	-	77006533-77006582	4q21.1a	Homo sapiens protein phosphatase, EF-hand calcium binding domain 2 (PPEF2), transcript variant 2, mRNA.		The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9326663] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events involved in sensory perception in which a sensory stimulus is received by a cell and converted into a molecular signal [goid 50906] [evidence IEA]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 9326663] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]		
Homo sapiens	RefSeq	XM_927187.1	ILMN_39943	LOC643926	XM_927187.1	XM_927187.1		643926	88995879	XM_927187.1	LOC643926	XP_932280.1	ILMN_3203712	0005900646	A	73	GTGGTGATTCAGGACAACAGTCTTCCCACGGGGCCCACTCCACAGATCCA	6	+	87198756-87198805	6q14.3d	PREDICTED: Homo sapiens similar to hCG1652647 (LOC643926), mRNA.					
Homo sapiens	RefSeq	XR_042089.1	ILMN_335901	LOC388820	XR_042089.1	XR_042089.1		388820	169215312	XR_042089.1	LOC388820		ILMN_3200242	0004490066	A	393	TGCAGGGCAAGGTCGCCAAGTGCTCCACCCTGTCTATCAGCAACAGAGCT	21	-	34713466-34713515	21q22.12a	PREDICTED: Homo sapiens misc_RNA (LOC388820), miscRNA.					
Homo sapiens	RefSeq	NM_002472.1	ILMN_2575	MYH8	NM_002472.2	NM_002472.2		4626	153945789	NM_002472.2	MYH8	NP_002463.2	ILMN_1754244	0002650382	S	5899	GTGCAGAGTAAACACACCTGCCTGATGCTATCAAGAGGCTGAAGAAAGGC	17	-	10293731-10293770:10293771-10293780	17p13.1a	Homo sapiens myosin, heavy chain 8, skeletal muscle, perinatal (MYH8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 2715179] [evidence NAS]	MyHC-pn; MyHC-peri	MyHC-pn; MyHC-peri
Homo sapiens	RefSeq	XR_038603.1	ILMN_341445	LOC100130990	XR_038603.1	XR_038603.1		100130990	169167835	XR_038603.1	LOC100130990		ILMN_3283463	0000540687	M	1396	GCCTTGAGGAGGTTTAATGGTCGTGGATTGGCCTTAGATGCCATCCTGAG				5q11.2d	PREDICTED: Homo sapiens misc_RNA (LOC100130990), miscRNA.					
Homo sapiens	RefSeq	XR_038603.1	ILMN_341445	LOC100130990	XR_038603.1	XR_038603.1		100130990	169167835	XR_038603.1	LOC100130990		ILMN_3206951	0002230324	A	560	AGGTGGGAGAGCCATCACAGTTTCCTCACATCTAAAGCAGTGTGTAACAG				5q11.2d	PREDICTED: Homo sapiens misc_RNA (LOC100130990), miscRNA.					
Homo sapiens	RefSeq	NR_029583.1	ILMN_388105	MIR197	NR_029583.1	NR_029583.1		406974	262206094	NR_029583.1	MIR197		ILMN_3310755	0000540639	S	22	AGTGGGAGGTAAGAGCTCTTCACCCTTCACCACCTTCTCCACCCAGCATG				1p13.3b	Homo sapiens microRNA 197 (MIR197), microRNA.					
Homo sapiens	RefSeq	NR_001278.1	ILMN_4317	CYP2B7P1	NR_001278.1	NR_001278.1		1556	28476829	NR_001278.1	CYP2B7P1		ILMN_2191192	0003370482	S	2587	CTCAGGTGATCCACACGCCTCAGTGTCCCAGAGTGCTGATATTACAGGCG	19	+	41456244-41456293	19q13.2b	Homo sapiens cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1 (CYP2B7P1), non-coding RNA.				CYP2B7; CYP2B; CYP2B7P	CYP2B7; CYP2B; CYP2B7P
Homo sapiens	RefSeq	NM_207317.1	ILMN_26423	ZNF474	NM_207317.1	NM_207317.1		133923	46409277	NM_207317.1	ZNF474	NP_997200.1	ILMN_1710722	0004390278	S	1466	CTGTAGGGGAACAAGAGAAAACTATCCCCAGAATCAGCCACCTCAGCCCC	5	+	121488775-121488780:121488781-121488824	5q23.1e-q23.2a	Homo sapiens zinc finger protein 474 (ZNF474), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ32921	FLJ32921
Homo sapiens	RefSeq	NM_207317.1	ILMN_26423	ZNF474	NM_207317.1	NM_207317.1		133923	46409277	NM_207317.1	ZNF474	NP_997200.1	ILMN_2202239	0001690079	S	1544	CAGCCTCAAAGCAGCCTGTTCAAGTTAACTCCCTGTTGAACTCCAGGGCC	5	+	121488853-121488902	5q23.1e-q23.2a	Homo sapiens zinc finger protein 474 (ZNF474), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ32921	FLJ32921
Homo sapiens	RefSeq	NM_000041.2	ILMN_11525	APOE	NM_000041.2	NM_000041.2		348	48762938	NM_000041.2	APOE	NP_000032.1	ILMN_1740938	0000730414	S	906	TTCCAGGCCCGCCTCAAGAGCTGGTTCGAGCCCCTGGTGGAAGACATGCA	19	+	45412376-45412425	19q13.32a	Homo sapiens apolipoprotein E (APOE), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 4345202] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8300609] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9622609] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8300609] [evidence EXP]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 8083695] [evidence NAS]; A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver [goid 34361] [pmid 8245722] [evidence IDA]; A lipoprotein particle, rich in cholesterol esters and low in triglycerides that is typically composed of APOB100 and APOE and has a density of 1.02-1.06 g/ml and a diameter of between 20-25 nm. LDL particles are formed from VLDL particles (via IDL) by the loss of triacylglycerol and gain of cholesterol ester. They transport endogenous cholesterol (and to some extent triglycerides) from peripheral tissues back to the liver [goid 34362] [pmid 8245722] [evidence IDA]; A triglyceride-rich lipoprotein particle that typically contains APOB100, APOE and APOCs and has a density of 1.006-1.019 g/ml and a diameter of between 25-30 nm. IDL particles are found in blood and are formed by the delipidation of very-low-density lipoprotein particles (VLDL). IDL particles are removed from blood by the liver, following binding to the APOE receptor, or are converted to low-density lipoprotein (LDL) [goid 34363] [pmid 17336988] [evidence IDA]; A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process [goid 34364] [pmid 210174] [evidence IDA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [pmid 8083695] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals [goid 302] [pmid 11743999] [evidence NAS]; Any process that stops, prevents, or reduces the rate or extent of endothelial cell proliferation [goid 1937] [pmid 9685360] [evidence IDA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [pmid 9649566] [evidence IDA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [pmid 3771793] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9685360] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12753088] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 9622609] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 16443932] [evidence IDA]; A series of molecular signals mediated by the detection of nitric oxide (NO) [goid 7263] [pmid 8995232] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [pmid 9622609] [evidence TAS]; Any process that decreases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue [goid 10544] [pmid 8995232] [evidence IDA]; A series of molecular signals in which a cell uses cyclic GMP to convert an extracellular signal into a response [goid 19934] [pmid 8995232] [evidence IDA]; Any process that modulates the rate, direction or extent of axon extension [goid 30516] [pmid 9622609] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP [goid 30828] [pmid 8995232] [evidence IDA]; A series of molecular signals within the cell that are mediated by the Cdc42 protein switching to a GTP-bound active state [goid 32488] [pmid 16443932] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein receptors [goid 32805] [pmid 15950758] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [evidence IEA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [pmid 11162594] [evidence IDA]; The process by which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded [goid 34382] [pmid 7175379] [evidence IMP]; The process by which a very-low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded [goid 34447] [pmid 9649566] [evidence IMP]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IEA]; An increase in the internal diameter of blood vessels, especially arterioles or capillaries, usually resulting in a decrease in blood pressure [goid 42311] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of MAP kinase activity [goid 43407] [pmid 9685360] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43537] [pmid 9685360] [evidence IDA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [pmid 8127890] [evidence IDA]; The directed movement of substances within a cell [goid 46907] [pmid 9622609] [evidence TAS]; A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48168] [pmid 9622609] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [pmid 8995232] [evidence IC ]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 8995232] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of membrane protein ectodomain peptidolysis [goid 51044] [pmid 15950758] [evidence IDA]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 11305869] [evidence IDA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 4066713] [evidence IDA]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [pmid 9685360] [evidence IDA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8245722] [evidence IDA]; The formation of bonds from two or more atoms within the same ligand to a metal atom in complexes in which the metal is part of a ring [goid 46911] [pmid 9685360] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 8245722] [evidence IPI]; Interacting selectively with tau protein. tau is a microtubule-associated protein, implicated in Alzheimer's disease, Down Syndrome and ALS [goid 48156] [pmid 7566652] [evidence IPI]; Interacting selectively with an apolipoprotein E receptor [goid 50749] [pmid 12950167] [evidence IPI]; Interacting selectively with an apolipoprotein E receptor [goid 50749] [pmid 1384047] [evidence IDA]	MGC1571; apoprotein; AD2; LPG	MGC1571; apoprotein; AD2; LPG
Homo sapiens	RefSeq	NM_014775.2	ILMN_164731	SFI1	NM_001007467.1	NM_001007467.1		9814	55956785	NM_001007467.1	SFI1	NP_001007468.1	ILMN_1763887	0004640367	A	3968	GGCCTGAGGACCAGGAAGTAGAGCAGCAGGTGCAGAAAGAGCTGGAACAG	22	+	30344163-30344212	22q12.2c	Homo sapiens Sfi1 homolog, spindle assembly associated (yeast) (SFI1), transcript variant 1, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]			MGC156283; RP5-858B16.1; MGC150663; MGC57874; hSfi1p; PISD; MGC131712	MGC156283; RP5-858B16.1; MGC150663; MGC57874; hSfi1p; PISD; MGC131712
Homo sapiens	RefSeq	NM_001007467.1	ILMN_164731	SFI1	NM_001007467.1	NM_001007467.1		9814	55956785	NM_001007467.1	SFI1	NP_001007468.1	ILMN_1703158	0001260113	I	1579	GTGACCCACGCTCATCTCCAGCAAATAAGAAGGAATCTTGCTCACCAGCA	22	+	30306288-30306337	22q12.2c	Homo sapiens Sfi1 homolog, spindle assembly associated (yeast) (SFI1), transcript variant 1, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]			MGC156283; RP5-858B16.1; MGC150663; MGC57874; hSfi1p; PISD; MGC131712	MGC156283; RP5-858B16.1; MGC150663; MGC57874; hSfi1p; PISD; MGC131712
Homo sapiens	RefSeq	XM_941328.1	ILMN_43134	LOC391033	XM_941328.1	XM_941328.1		391033	88948845	XM_941328.1	LOC391033	XP_946421.1	ILMN_1721342	0007560064	S	459	CAAGATGTTGCTTATGCTTTGGGCTGCAGGTAGGGACGATAGACTGACAG				1p34.2a	PREDICTED: Homo sapiens similar to Makorin-1 (RING finger protein 61) (LOC391033), mRNA.					
Homo sapiens	RefSeq	NM_000572.2	ILMN_9173	IL10	NM_000572.2	NM_000572.2		3586	24430216	NM_000572.2	IL10	NP_000563.1	ILMN_2073307	0003990703	S	1417	GGAAGTTGCAGTGAGCTGATATCATGCCCCTGTACTCCAGCCTGGGTGAC	1	-	206941110-206941159	1q32.1h	Homo sapiens interleukin 10 (IL10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1847510] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [pmid 17449476] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of cytokine secretion during immune response [goid 2740] [pmid 10443688] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 8312229] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9463379] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The selective interaction of the transcription factor NF-kappaB with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 7253] [pmid 10975994] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 1847510] [evidence IC ]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [pmid 9184696] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 11244051] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 8228801] [evidence NAS]; The movement of a leukocyte in response to an external stimulus [goid 30595] [pmid 9405662] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid dendritic cell activation [goid 30886] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production [goid 32695] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [pmid 10443688] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 32800] [pmid 10443688] [evidence IDA]; An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is typically orchestrated by the production of particular cytokines by T-helper 2 cells, most notably IL-4, IL-5, IL-10, and IL-13, resulting in enhanced production of certain antibody isotypes and other effects [goid 42092] [pmid 11244051] [evidence TAS]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 8228801] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [pmid 8499633] [evidence NAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Any process that modulates the frequency, rate or extent of isotype switching [goid 45191] [pmid 8228801] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45347] [pmid 11244051] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45348] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-alpha [goid 45355] [pmid 9637497] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [pmid 10443688] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [pmid 10443688] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-10 receptor [goid 5141] [pmid 1847510] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11485736] [evidence IPI]	CSIF; IL-10; IL10A; MGC126451; TGIF; MGC126450	CSIF; IL10A; MGC126451; IL-10; TGIF; MGC126450
Homo sapiens	RefSeq	NM_000572.2	ILMN_9173	IL10	NM_000572.2	NM_000572.2		3586	24430216	NM_000572.2	IL10	NP_000563.1	ILMN_1674167	0006180093	S	1061	GGAAGAGAAACCAGGGAGCCCCTTTGATGATTAATTCACCTTCCAGTGTC	1	-	206941466-206941515	1q32.1h	Homo sapiens interleukin 10 (IL10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1847510] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin [goid 2237] [pmid 17449476] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of cytokine secretion during immune response [goid 2740] [pmid 10443688] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 8312229] [evidence NAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9463379] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The selective interaction of the transcription factor NF-kappaB with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 7253] [pmid 10975994] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 1847510] [evidence IC ]; Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form [goid 10468] [pmid 9184696] [evidence IDA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 11244051] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 8228801] [evidence NAS]; The movement of a leukocyte in response to an external stimulus [goid 30595] [pmid 9405662] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid dendritic cell activation [goid 30886] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-12 production [goid 32695] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-6 production [goid 32715] [pmid 10443688] [evidence IDA]; The chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 32800] [pmid 10443688] [evidence IDA]; An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is typically orchestrated by the production of particular cytokines by T-helper 2 cells, most notably IL-4, IL-5, IL-10, and IL-13, resulting in enhanced production of certain antibody isotypes and other effects [goid 42092] [pmid 11244051] [evidence TAS]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 8228801] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [pmid 8499633] [evidence NAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Any process that modulates the frequency, rate or extent of isotype switching [goid 45191] [pmid 8228801] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45347] [pmid 11244051] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45348] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-alpha [goid 45355] [pmid 9637497] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50715] [pmid 10443688] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects [goid 51384] [pmid 10443688] [evidence IDA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-10 receptor [goid 5141] [pmid 1847510] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11485736] [evidence IPI]	CSIF; IL-10; IL10A; MGC126451; TGIF; MGC126450	CSIF; IL10A; MGC126451; IL-10; TGIF; MGC126450
Homo sapiens	RefSeq	NM_052934.2	ILMN_9575	SLC26A9	NM_052934.2	NM_052934.2		115019	20336286	NM_052934.2	SLC26A9	NP_443166.1	ILMN_1726081	0001070270	I	2527	TGGCACTTGGGACTTCCATAAAGGATGAGCCTGGGGTCACAGGGGGTGTC	1	-	204151021-204151070	1q32.1g	Homo sapiens solute carrier family 26, member 9 (SLC26A9), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3- [goid 15106] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion A(out) + anion B(in) = anion A(in) + anion B(out) [goid 15301] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]		
Homo sapiens	RefSeq	NM_134325.1	ILMN_9575	SLC26A9	NM_052934.2	NM_052934.2		115019	20336286	NM_052934.2	SLC26A9	NP_443166.1	ILMN_1683102	0002190711	A	4465	GCCACATGTCTGAGGGTTGCAGAGCCCGCTGTGGAGGTAAGATTGGAAAC	1	-	204149083-204149132	1q32.1g	Homo sapiens solute carrier family 26, member 9 (SLC26A9), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of bicarbonate into, out of, within or between cells [goid 15701] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Catalysis of the transfer of bicarbonate from one side of a membrane to the other. Bicarbonate is the hydrogencarbonate ion, HCO3- [goid 15106] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: anion A(out) + anion B(in) = anion A(in) + anion B(out) [goid 15301] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]		
Homo sapiens	Unigene	Hs.545644	ILMN_108801	HS.545644	Hs.545644		Hs.545644		3427529	AI088470			ILMN_1893344	0006060224	S	56	GCACACGGTTGCTCCGCCTCAGGGTTAAGCAGCCCTTGTTACAGAGAAAT	9	+	112675216-112675265		qb07g10.x1 Soares_pregnant_uterus_NbHPU Homo sapiens cDNA clone IMAGE:1695618 3, mRNA sequence					
Homo sapiens	RefSeq	XM_943689.1	ILMN_179782	PKP3	XM_001129327.1	XM_001129327.1		11187	113422684	XM_001129327.1	PKP3	XP_001129327.1	ILMN_1726112	0003420040	A	38	CTCGAGGGACAGGACGTGAAGATAGTTGGGTTTGGAGGCGGCCGCCAGGC				11p15.5d	PREDICTED: Homo sapiens plakophilin 3 (PKP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_139176.2	ILMN_10029	NLRP7	NM_139176.2	NM_139176.2		199713	46049099	NM_139176.2	NLRP7	NP_631915.2	ILMN_1798063	0006180600	I	2838	TTGGATCTGCTCTCCTCAGCAATCAGAAGCTTGAAACTCTGGACCTGGGC	19	-	60130864-60130913	19q13.42b	Homo sapiens NLR family, pyrin domain containing 7 (NLRP7), transcript variant 1, mRNA.		Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC126470; MGC126471; PYPAF3; NALP7; HYDM; NOD12; CLR19.4; PAN7	MGC126470; PYPAF3; NALP7; HYDM; CLR19.4; PAN7; MGC126471; NOD12
Homo sapiens	RefSeq	NM_206828.2	ILMN_10029	NLRP7	NM_139176.2	NM_139176.2		199713	46049099	NM_139176.2	NLRP7	NP_631915.2	ILMN_1652366	0005670129	A	3101	GCAGCCTGGGATCGCTCTACGAATTACACAGGAAGCGGGATTCGGGTCTC	19	-	60126869-60126918	19q13.42b	Homo sapiens NLR family, pyrin domain containing 7 (NLRP7), transcript variant 1, mRNA.		Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC126470; MGC126471; PYPAF3; NALP7; HYDM; NOD12; CLR19.4; PAN7	MGC126470; PYPAF3; NALP7; HYDM; CLR19.4; PAN7; MGC126471; NOD12
Homo sapiens	RefSeq	XM_932990.1	ILMN_182357	CFC1B	NM_001079530.1	NM_001079530.1		653275	118600994	NM_001079530.1	CFC1B	NP_001072998.1	ILMN_1781980	0007050053	A	114	CCCCAGCCAGGTCTCATAGAGGGAATTGTTCTTCAGGCTCGGAGGGGCCT	2	+	130995250-130995299	2q21.1c	Homo sapiens cripto, FRL-1, cryptic family 1B (CFC1B), mRNA.					
Homo sapiens	RefSeq	XM_942033.1	ILMN_44104	LOC652543	XM_942033.1	XM_942033.1		652543	89071681	XM_942033.1	LOC652543	XP_947126.1	ILMN_1663980	0005550689	S	44	AAGCGGGCTCTGACCTCCTTCCTGTTCACCTTTGCCTTTGTCCAGGGAGA					PREDICTED: Homo sapiens similar to Matrix metalloproteinase-19 precursor (MMP-19) (Matrix metalloproteinase RASI) (MMP-18) (LOC652543), mRNA.					
Homo sapiens	RefSeq	NM_016272.3	ILMN_20324	TOB2	NM_016272.3	NM_016272.3		10766	56682970	NM_016272.3	TOB2	NP_057356.1	ILMN_1748884	0001400491	S	4287	AGATTCTCTAGTTTTCTCCCTAGGGATGGGAAGGGGGCATTGAGGCAAGC	22	-	41829720-41829769	22q13.2a	Homo sapiens transducer of ERBB2, 2 (TOB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10602502] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [pmid 10602502] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10602502] [evidence TAS]		TOBL; TROB2; TOB4	TOBL; TROB2; TOB4
Homo sapiens	RefSeq	NM_001080500.1	ILMN_181896	LOC402117	NM_001080500.1	NM_001080500.1		402117	122937445	NM_001080500.1	LOC402117	NP_001073969.1	ILMN_2386631	0004120669	A	522	CCATGTGTCTGTGCTCTAGATGGACCTGTTTGCGACCAACCAGAATGCCC	2	+	214987385-214987434	2q34f-q35a	Homo sapiens similar to CRiM (Cysteine RIch motor neuron protein) homolog family member (crm-1) (LOC402117), mRNA.					
Homo sapiens	RefSeq	NM_182836.1	ILMN_4154	RABGGTA	NM_182836.1	NM_182836.1		5875	33469950	NM_182836.1	RABGGTA	NP_878256.1	ILMN_2299221	0004120438	A	1359	GCTGTATGAGAAGGAGACCCTGCAGTACTTCCAGACCCTCAAGGCCGTGG	14	-	24736975-24736982:24737076-24737117	14q12a	Homo sapiens Rab geranylgeranyltransferase, alpha subunit (RABGGTA), transcript variant 1, mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 8380507] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 2018975] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 8380507] [evidence TAS]; The enzymatic addition of a geranylgeranyl moiety to a protein as a posttranslational modification [goid 18344] [evidence IEA]; The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]	Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [pmid 2018975] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein [goid 8318] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_003941.2	ILMN_4756	WASL	NM_003941.2	NM_003941.2		8976	33946268	NM_003941.2	WASL	NP_003932.3	ILMN_1666004	0006380138	S	4089	CAGTCCTCTACCATCCTGCACTGTGAGCAGCACTATACCTGTGCGTTGTC	7	-	123322280-123322329	7q31.32b	Homo sapiens Wiskott-Aldrich syndrome-like (WASL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9422512] [evidence TAS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9422512] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9422512] [evidence TAS]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 9422512] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [pmid 9422512] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16253999] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16293614] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14732713] [evidence IPI]	DKFZp779G0847; NWASP; MGC48327; N-WASP	DKFZp779G0847; NWASP; MGC48327; N-WASP
Homo sapiens	RefSeq	NM_021139.1	ILMN_14682	UGT2B4	NM_021139.1	NM_021139.1		7363	10863940	NM_021139.1	UGT2B4	NP_066962.1	ILMN_1805003	0002570209	S	1189	CTCTCCTAGAATCCCTATGGTGGGCGTTCCATTGTTTGCAGATCAACCTG	4	-	70385623-70385672	4q13.2c	Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide B4 (UGT2B4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6711] [pmid 8333863] [evidence IDA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [pmid 8333863] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [pmid 8333863] [evidence IDA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	UGT2B11	UGT2B11
Homo sapiens	RefSeq	NM_021139.1	ILMN_14682	UGT2B4	NM_021139.1	NM_021139.1		7363	10863940	NM_021139.1	UGT2B4	NP_066962.1	ILMN_2206500	0002570722	S	1606	GAAGGGGAAAAGAGATTAATTACGTCTGAGGCTGGAAGCTGGGAAACCCA	4	-	70380909-70380940:70380941-70380958	4q13.2c	Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide B4 (UGT2B4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6711] [pmid 8333863] [evidence IDA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [pmid 8333863] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [pmid 8333863] [evidence IDA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	UGT2B11	UGT2B11
Homo sapiens	RefSeq	NM_018219.1	ILMN_16280	CCDC87	NM_018219.1	NM_018219.1		55231	8922668	NM_018219.1	CCDC87	NP_060689.1	ILMN_1706691	0006940187	S	2613	ACCCCTATTACTCCTTGACCAGGCCCAGTGCCCTCAAATGCCTCCCTCAC	11	-	66114448-66114497	11q13.1e	Homo sapiens coiled-coil domain containing 87 (CCDC87), mRNA.				FLJ10786	FLJ10786
Homo sapiens	RefSeq	XR_038940.1	ILMN_334491	LOC100132773	XR_038940.1	XR_038940.1		100132773	169167702	XR_038940.1	LOC100132773		ILMN_3198545	0001570609	A	670	CATCTCAGGATAAAGACAAAGAAAGCCGTTGTACCCGGCAGCACGTACAG				5p15.33d	PREDICTED: Homo sapiens misc_RNA (LOC100132773), miscRNA.					
Homo sapiens	RefSeq	XR_038940.1	ILMN_334491	LOC100132773	XR_038940.1	XR_038940.1		100132773	169167702	XR_038940.1	LOC100132773		ILMN_3275021	0006960477	M	780	TGATCCCGGAAAGAAAAAATCAAGAAAAAGAATCTGATGCCTCAACTGTG				5p15.33d	PREDICTED: Homo sapiens misc_RNA (LOC100132773), miscRNA.					
Homo sapiens	RefSeq	NM_002108.2	ILMN_177429	HAL	NM_002108.2	NM_002108.2		3034	4809282	NM_002108.2	HAL	NP_002099.1	ILMN_2074748	0006840468	S	2983	CCCCCAAATGCTTACATGGGAGTTTGAGGTTAGTATTTTCACTTCCTTGG	12	-	96367248-96367297	12q23.1a	Homo sapiens histidine ammonia-lyase (HAL), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15806399] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the reaction: L-histidine = urocanate + NH3 [goid 4397] [evidence IEA]; Catalysis of the reaction: L-histidine = urocanate + NH3 [goid 4397] [pmid 15806399] [evidence EXP]; Catalysis of the ligation of ammonia (NH3) to another substance via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16211] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	HSTD; histidase; HIS	HSTD; histidase; HIS
Homo sapiens	RefSeq	NM_002108.2	ILMN_177429	HAL	NM_002108.2	NM_002108.2		3034	4809282	NM_002108.2	HAL	NP_002099.1	ILMN_1719988	0006960274	S	2301	GGGCAGTCAGTTTAGCACAAAGCAATACTAGGCTGAAGGAGAGACCTGAG	12	-	96367930-96367979	12q23.1a	Homo sapiens histidine ammonia-lyase (HAL), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15806399] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid [goid 6548] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the reaction: L-histidine = urocanate + NH3 [goid 4397] [evidence IEA]; Catalysis of the reaction: L-histidine = urocanate + NH3 [goid 4397] [pmid 15806399] [evidence EXP]; Catalysis of the ligation of ammonia (NH3) to another substance via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16211] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	HSTD; histidase; HIS	HSTD; HIS
Homo sapiens	RefSeq	NM_173618.1	ILMN_3654	INO80E	NM_173618.1	NM_173618.1		283899	27734726	NM_173618.1	INO80E	NP_775889.1	ILMN_1724406	0000580037	S	765	TTCAGCGATGCAGGTAGCGGGGACGATGCCTTGGATGGAGACGATGACCT	16	+	29924193-29924242	16p11.2d	Homo sapiens INO80 complex subunit E (INO80E), mRNA.				FLJ90652; FLJ00079	FLJ00079; FLJ90652
Homo sapiens	RefSeq	XM_939912.1	ILMN_173976	LOC650823	XM_001129687.1	XM_001129687.1		650823	113428041	XM_001129687.1	LOC650823	XP_001129687.1	ILMN_1800147	0005890725	S	1307	GAGGAAGGCCGGTGACACACAGCCCCGCCACCCTGTATGTCAGCCAGTGA				19p13.3g	PREDICTED: Homo sapiens hypothetical LOC650823 (LOC650823), mRNA.					
Homo sapiens	RefSeq	XM_371210.4	ILMN_173432	LOC727855	XR_015130.1	XR_015130.1		727855	113411816	XR_015130.1	LOC727855		ILMN_1798875	0005220113	S	3181	GGAGCCAGCACCATGGACAGAAAACTGCCCACCAGGATCTGACGCCAGCA	1	+	75506-75555		PREDICTED: Homo sapiens similar to Taste receptor type 1 member 3 precursor (Sweet taste receptor T1R3) (LOC727855), mRNA.					
Homo sapiens	RefSeq	NM_021029.4	ILMN_11108	RPL36A	NM_021029.4	NM_021029.4		6173	78190470	NM_021029.4	RPL36A	NP_066357.1	ILMN_2112811	0006860671	S	1	GAGGAAGTGCGATCGGGAACCTCCTATATACTTCCGTTTGCCTCGCGGTT	X	+	100532604-100532653	Xq22.1c	Homo sapiens ribosomal protein L36a (RPL36A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 3542712] [evidence NAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	RPL44; MGC72020; MIG6; L44L	RPL44; MGC72020; MIG6; L44L
Homo sapiens	Unigene	Hs.270303	ILMN_84011	HS.270303	Hs.270303		Hs.270303		27821870	BX089704			ILMN_1823078	0005810152	S	274	TGGCAGTGAGCTGTAGCAAGAAACCAGTTGTTCACCATTTAAGGGTTAGG	11	+	31764843-31764892		BX089704 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGp998L13153 ; IMAGE:32366, mRNA sequence					
Homo sapiens	RefSeq	NM_002377.2	ILMN_17613	MAS1	NM_002377.2	NM_002377.2		4142	6006022	NM_002377.2	MAS1	NP_002368.1	ILMN_1788769	0004070292	S	789	GGGAACCTACACCACATTTCCCTGCTCTTCTCCACAATCAACAGTAGCGC	6	+	160248752-160248801	6q25.3f	Homo sapiens MAS1 oncogene (MAS1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3419518] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 3419518] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 3419518] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8661154] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [pmid 3419518] [evidence TAS]	MGC119966; MAS	MGC119966; MAS
Homo sapiens	RefSeq	NM_182513.1	ILMN_174688	SPC24	NM_182513.1	NM_182513.1		147841	32698865	NM_182513.1	SPC24	NP_872319.1	ILMN_2181432	0005910349	S	1774	TAGAAGGCAGAGGCCGGCAGATCACTTGAGCCCAGGAGTTGGAGACCAGA	19	-	11117635-11117684	19p13.2b	Homo sapiens SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) (SPC24), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15961401] [evidence IPI]	SPBC24; FLJ90806	SPBC24; FLJ90806
Homo sapiens	RefSeq	NM_012437.3	ILMN_1407	SNAPIN	NM_012437.3	NM_012437.3		23557	39725677	NM_012437.3	SNAPIN	NP_036569.1	ILMN_1799969	0000870041	S	837	GGGGATTTGGAGGGGGCAGGCAAAGTCAAAGTGAATGACCTCTGTCCACC	1	+	151900807-151900856	1q21.3d	Homo sapiens SNAP-associated protein (SNAPIN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [pmid 10195194] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 10195194] [evidence TAS]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [pmid 10195194] [evidence TAS]	Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [pmid 10195194] [evidence TAS]	SNAPAP; SNAPIN	SNAPAP; SNAPIN
Homo sapiens	RefSeq	NM_022353.2	ILMN_25903	OSGEPL1	NM_022353.2	NM_022353.2		64172	116812635	NM_022353.2	OSGEPL1	NP_071748.2	ILMN_2047676	0003840747	S	1648	CGTGCTGGCTTGGGCATTTTACATGACATAGAAGGCATCCGCTATGAACC	2	-	190617381-190617430	2q32.2a	Homo sapiens O-sialoglycoprotein endopeptidase-like 1 (OSGEPL1), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_002534.2	ILMN_2829	OAS1	NM_002534.2	NM_002534.2		4938	74229010	NM_002534.2	OAS1	NP_002525.2	ILMN_1658247	0003450180	I	1152	CTCCTGCTTCCTCCCTGCCATTCATCCCTGCCCCTCTCCATGAAGCTTGA	12	+	111839896-111839945	12q24.13b	Homo sapiens 2',5'-oligoadenylate synthetase 1, 40/46kDa (OAS1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 3754863] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 2440675] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	OIAS; OIASI; IFI-4	OIAS; OIASI; IFI-4
Homo sapiens	RefSeq	NM_021911.1	ILMN_29678	GABRB2	NM_000813.2	NM_000813.2		2561	124294884	NM_000813.2	GABRB2	NP_000804.1	ILMN_1798046	0001300020	A	1415	CAGCATCCAGTATCGGAAAGCTGGGTTGCCCAGGCATAGTTTTGGCCGAA	5	-	160770612-160770641:160819208-160819227	5q34a	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, beta 2 (GABRB2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8264558] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [pmid 8264558] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8264558] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [pmid 8264558] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC119389; MGC119386; MGC119388	MGC119386; MGC119389
Homo sapiens	Unigene	Hs.563827	ILMN_116606	HS.563827	Hs.563827		Hs.563827		875652	H10832			ILMN_1825182	0002360497	S	246	CATCAGAGATCCTTAGGTAGGTGTGTGTTTTTTGCTGAAGGGTTCGTCTG					ym06b01.s1 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGE:47119 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001714248.1	ILMN_344310	LOC100129282	XM_001714248.1	XM_001714248.1		100129282	169164962	XM_001714248.1	LOC100129282	XP_001714300.1	ILMN_3187273	0003290039	A	832	GAGTTTGGAGCTGAGGCTACTGCTTTCTCCCAAGGGTTCTCTTCGAGCCC	3	+	73757068-73757117	3p13a	PREDICTED: Homo sapiens hypothetical LOC100129282 (LOC100129282), mRNA.					
Homo sapiens	RefSeq	NM_001483.1	ILMN_10399	GBAS	NM_001483.1	NM_001483.1		2631	4503936	NM_001483.1	GBAS	NP_001474.1	ILMN_1778611	0000270376	S	1681	AGCTCACAGCAGATAATTCTGAGATCATGGGTGAGGGGTGGTGCATGTTG	7	+	56034973-56035022	7p11.2b	Homo sapiens glioblastoma amplified sequence (GBAS), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9615231] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9615231] [evidence TAS]			NIPSNAP2	NIPSNAP2
Homo sapiens	RefSeq	XM_001718131.1	ILMN_337199	LOC100128640	XM_001718131.1	XM_001718131.1		100128640	169165894	XM_001718131.1	LOC100128640	XP_001718183.1	ILMN_3179067	0003710360	A	1004	ACCCTCCTTATCACACAACTAGAGCTTCGGAGGAACGTGATGGGGCTCCC				3p22.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128640 (LOC100128640), mRNA.					
Homo sapiens	RefSeq	XM_001725194.1	ILMN_353203	LOC100131693	XM_001725194.1	XM_001725194.1		100131693	169211873	XM_001725194.1	LOC100131693	XP_001725246.1	ILMN_3296840	0006350450	M	1	GTTTAAGACCGAGATCGATCTAAGATGGCGACCGTCGAACCGGAAACCAC				17q21.33a	PREDICTED: Homo sapiens similar to hCG1777996 (LOC100131693), mRNA.					
Homo sapiens	RefSeq	NM_152507.1	ILMN_9812	C21ORF128	NM_152507.1	NM_152507.1		150147	22749052	NM_152507.1	C21orf128	NP_689720.1	ILMN_1663893	0004900040	S	1491	GGCTTGCTTCTCCCTGGCTGTCTGCTGATGTCTCCCTTTAGTCACGAGGG	21	-	42395827-42395876	21q22.3b	Homo sapiens chromosome 21 open reading frame 128 (C21orf128), mRNA.				FLJ33471	FLJ33471
Homo sapiens	RefSeq	NM_001009181.1	ILMN_3788	STATH	NM_001009181.1	NM_001009181.1		6779	57164945	NM_001009181.1	STATH	NP_001009181.1	ILMN_2322356	0000020113	A	186	GGGTATGGCCCTTATCAGCCAGTTCCAGAACAACCACTATACCCACAACC	4	+	70866583-70866632	4q13.3a	Homo sapiens statherin (STATH), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1718282] [evidence NAS]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 1313424] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization [goid 30502] [pmid 1313424] [evidence NAS]; The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin [goid 46541] [pmid 1718282] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1718282] [evidence IPI]; Functions as a lubricant for an extracellular matrix, such as a mucous membrane [goid 30197] [pmid 1718282] [evidence NAS]; The action of a molecule that contributes to the structural integrity of tooth enamel [goid 30345] [pmid 1718282] [evidence NAS]; Interacting selectively with hydroxyapatite, the calcium phosphate mineral of formula Ca10(PO4)6(OH)2 found both in rocks of nonorganic origin and as a component of bone and dentine [goid 46848] [pmid 1741693] [evidence NAS]	STR	STR
Homo sapiens	RefSeq	NM_030570.2	ILMN_24270	UPK3B	NM_030570.2	NM_030570.2		80761	33149302	NM_030570.2	UPK3B	NP_085047.1	ILMN_1701565	0006290500	I	332	ACGCGTCCAGCCAGACCCAAGGGGCTGGGGGCCCTGCTGGAGTGATTGGA	7	+	75978012-75978061	7q11.23f	Homo sapiens uroplakin 3B (UPK3B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			UPIIIb; FLJ32198; P35; MGC10902	FLJ32198; MGC10902; UPIIIb; P35
Homo sapiens	RefSeq	NM_182684.1	ILMN_24270	UPK3B	NM_030570.2	NM_030570.2		80761	33149302	NM_030570.2	UPK3B	NP_085047.1	ILMN_1803024	0006510121	A	946	ACTCTTGGCCTTCTTGGCAGCCTCTACCATGCGCTTCTCCAGCCTGTGGT	7	+	75981294-75981329:75982298-75982311	7q11.23f	Homo sapiens uroplakin 3B (UPK3B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			UPIIIb; FLJ32198; P35; MGC10902	FLJ32198; MGC10902; UPIIIb; P35
Homo sapiens	RefSeq	XM_939679.1	ILMN_24270	UPK3B	NM_030570.2	NM_030570.2		80761	33149302	NM_030570.2	UPK3B	NP_085047.1	ILMN_1706441	0007560286	A	1259	AGCACACCCCGTACCCTGCCTGGAATCCCAGCACCAGCCCCCCTGCCTCT	7	+	75982575-75982624	7q11.23f	Homo sapiens uroplakin 3B (UPK3B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			UPIIIb; FLJ32198; P35; MGC10902	
Homo sapiens	RefSeq	NM_012190.2	ILMN_9503	ALDH1L1	NM_012190.2	NM_012190.2		10840	21614512	NM_012190.2	ALDH1L1	NP_036322.2	ILMN_1802167	0006660341	S	2846	GAGGCGGCTCTGAACGAGTACCTGCGGGTCAAGACAGTGACCTTCGAATA	3	-	127305327-127305376	3q21.2c	Homo sapiens aldehyde dehydrogenase 1 family, member L1 (ALDH1L1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate [goid 9258] [pmid 10204077] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Enables the directed movement of acyl groups into, out of, within or between cells [goid 36] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: 10-formyltetrahydrofolate + NADP+ + H2O = tetrahydrofolate + CO2 + NADPH + H+ [goid 16155] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA];  [goid 16742] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]; Enables the directed movement of acyl groups into, out of, within or between cells [goid 36] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA];  [goid 16742] [evidence IEA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]	FTHFD; DKFZp781N0997	FTHFD; DKFZp781N0997
Homo sapiens	RefSeq	XM_927473.1	ILMN_39928	LOC284274	XM_927473.1	XM_927473.1		284274	89047252	XM_927473.1	LOC284274	XP_932566.1	ILMN_1660653	0001500484	A	1490	TGAGGACCTGAGTGCAGATGGCTGGGCTCCCCGGAACAAAGTGGAGGAAT	18	-	71250707-71250756	18q22.3d	PREDICTED: Homo sapiens hypothetical protein LOC284274 (LOC284274), mRNA.					
Homo sapiens	RefSeq	XM_001723119.1	ILMN_345383	LOC100133771	XM_001723119.1	XM_001723119.1		100133771	169164679	XM_001723119.1	LOC100133771	XP_001723171.1	ILMN_3243999	0005310382	S	366	GCCCCACCCTTGGGCTGAGAGGACCTGGGAAGCCCCTCCAGGAGGGAACA					PREDICTED: Homo sapiens hypothetical protein LOC100133771 (LOC100133771), mRNA.					
Homo sapiens	RefSeq	XM_926198.1	ILMN_43319	LOC642776	XM_926198.1	XM_926198.1		642776	89060041	XM_926198.1	LOC642776	XP_931291.1	ILMN_1716431	0005310743	S	314	CCAAAAATGCCATCGAAGAATCATCTTCCACCCCCTCTGGGGAACAGGAG	X	-	114999468-114999494:115021661-115021683	Xq23d	PREDICTED: Homo sapiens hypothetical protein LOC642776 (LOC642776), mRNA.					
Homo sapiens	RefSeq	XM_942730.1	ILMN_139137	UNKL	XM_942730.1	XM_942730.1		64718	89040578	XM_942730.1	UNKL	XP_947823.1	ILMN_1674996	0004070240	A	2217	GCCACTTAGGCCACAGACCACACATCGGCAGGACACTAGACCAGTCCCAT				16p13.3e	PREDICTED: Homo sapiens unkempt-like (Drosophila) (UNKL), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_001099439.1	ILMN_308319	EPHA10	NM_001099439.1	NM_001099439.1		284656	150456459	NM_001099439.1	EPHA10	NP_001092909.1	ILMN_3307602	0005560367	I	5188	AGAAGGGCCCCTGGCTGTGTTGGCAGGACTTCGGTGTCCAGGGTAGATCT	1	-	38181919-38181968	1p34.3b	Homo sapiens EPH receptor A10 (EPHA10), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC43817; FLJ33655; FLJ16103	MGC43817; FLJ33655; FLJ16103
Homo sapiens	RefSeq	NM_032352.3	ILMN_11636	BRMS1L	NM_032352.3	NM_032352.3		84312	68348706	NM_032352.3	BRMS1L	NP_115728.2	ILMN_2225511	0004250292	S	2122	AACCTCAGGAACAGTACAAAGAATTGAAACCCTCAATATGGCAGCACAGC	14	+	35410458-35410507	14q13.2b	Homo sapiens breast cancer metastasis-suppressor 1-like (BRMS1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		BRMS1; MGC11296	BRMS1; MGC11296
Homo sapiens	RefSeq	NM_032352.3	ILMN_11636	BRMS1L	NM_032352.3	NM_032352.3		84312	68348706	NM_032352.3	BRMS1L	NP_115728.2	ILMN_1775943	0003140039	S	2054	GGCCATTTGGTGCAATTTAGAAAGTGTTGGCCTCCCTTCCGCTAGCCACA	14	+	35410390-35410439	14q13.2b	Homo sapiens breast cancer metastasis-suppressor 1-like (BRMS1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		BRMS1; MGC11296	BRMS1; MGC11296
Homo sapiens	RefSeq	XM_001717918.1	ILMN_334625	LOC100133585	XM_001717918.1	XM_001717918.1		100133585	169217876	XM_001717918.1	LOC100133585	XP_001717970.1	ILMN_3235409	0001780692	S	241	AAGGACACCTGAGGGGTCAGGATATCCCCACCCCCACCCTGGGAAAGACG					PREDICTED: Homo sapiens similar to RABEP2 protein (LOC100133585), mRNA.					
Homo sapiens	RefSeq	NM_001033579.1	ILMN_23045	MYOHD1	NM_001033579.1	NM_001033579.1		80179	75750489	NM_001033579.1	MYOHD1	NP_001028751.1	ILMN_1685645	0004040767	I	2133	CATGGGGCTGTTTCCTACTAACCCCAAAGAGAAGACCCAGGAGGAACCCC	17	-	31936454-31936503	17q12b	Homo sapiens myosin head domain containing 1 (MYOHD1), transcript variant 2, mRNA.				FLJ22865	FLJ22865
Homo sapiens	RefSeq	NM_016510.3	ILMN_30239	SCLY	NM_016510.3	NM_016510.3		51540	39725671	NM_016510.3	SCLY	NP_057594.2	ILMN_1722742	0001580519	S	2121	AATCAGGGCTGCGCACTTCCCTGTCCACGGTCCCCAGGCCTTCCTGTCTT	2	+	238672502-238672551	2q37.3b	Homo sapiens selenocysteine lyase (SCLY), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: L-selenocysteine + reduced acceptor = hydrogen selenide + L-alanine + acceptor [goid 9000] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	SCL	SCL
Homo sapiens	RefSeq	NM_004654.3	ILMN_183654	USP9Y	NM_004654.3	NM_004654.3		8287	74319832	NM_004654.3	USP9Y	NP_004645.2	ILMN_2056795	0005860465	S	9257	GTGTAGCCAAGAGGACAGAATTACATGAATGACAGTGCCCAGAGTGACAG	Y	+	13481379-13481428	Yq11.21a-q11.21b	Homo sapiens ubiquitin specific peptidase 9, Y-linked (USP9Y), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9384609] [evidence TAS]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [pmid 8922996] [evidence TAS]	SP3; AZF; AZFA; AZF1; DFFRY	AZF1; DFFRY; SP3; AZF; AZFA
Homo sapiens	RefSeq	NM_198989.1	ILMN_14063	DLEU7	NM_198989.1	NM_198989.1		220107	39752666	NM_198989.1	DLEU7	NP_945340.1	ILMN_1782881	0001940093	S	1786	GTTCCCTCAAAACTGATGTGGGCACTTGGCCCAGAAGTTGTTTGCTAATG	13	-	50184294-50184343	13q14.3b	Homo sapiens deleted in lymphocytic leukemia, 7 (DLEU7), mRNA.				FLJ44882; MGC138214	FLJ44882; MGC138214
Homo sapiens	RefSeq	NM_015622.5	ILMN_165305	C7ORF28A	XM_001133729.1	XM_001133729.1		51622	113431363	XM_001133729.1	C7orf28A	XP_001133729.1	ILMN_1660270	0003130477	A	215	TAATGAAGATTCTCGGTGACATCAACAGTGACTTTACCAGAGTGGATGAA				7p22.1b	PREDICTED: Homo sapiens chromosome 7 open reading frame 28A (C7orf28A), mRNA.					H_DJ1163J12.2; CGI-43
Homo sapiens	RefSeq	XM_001720331.1	ILMN_339314	LOC100131473	XM_001720331.1	XM_001720331.1		100131473	169164243	XM_001720331.1	LOC100131473	XP_001720383.1	ILMN_3280926	0006350519	M	254	GGAAGCGCATCACTCGGGGCTCAGGGACAACTTTCACGTGTCACTTCTTC					PREDICTED: Homo sapiens hypothetical protein LOC100131473 (LOC100131473), mRNA.					
Homo sapiens	RefSeq	NM_181866.2	ILMN_3201	ACOT7	NM_181866.2	NM_181866.2		11332	75709215	NM_181866.2	ACOT7	NP_863656.1	ILMN_1784756	0002320553	I	68	TCTGCATCTGATCCTGGGATGTCCTAGCCACCATGGCTTTCCAGCTGAGC	1	-	6418887-6418905:6418906-6418936	1p36.31a	Homo sapiens acyl-CoA thioesterase 7 (ACOT7), transcript variant hBACHd, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10578051] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10578051] [evidence TAS]	Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [pmid 10578051] [evidence TAS]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	hBACH; LACH1; RP1-120G22.10; MGC1126; LACH; BACH; ACH1; ACT; CTE-II	hBACH; LACH1; RP1-120G22.10; MGC1126; LACH; BACH; ACH1; ACT; CTE-II
Homo sapiens	RefSeq	XM_928743.1	ILMN_44811	LOC645732	XM_928743.1	XM_928743.1		645732	89027840	XM_928743.1	LOC645732	XP_933836.1	ILMN_1662189	0001030148	S	2675	CTCTTGCGACTCCCCTGTGAGGCTGTAATTCCCTGGGTCCCATTGCCATG	8	-	7662102-7662139:7662170-7662181		PREDICTED: Homo sapiens hypothetical protein LOC645732 (LOC645732), mRNA.					
Homo sapiens	RefSeq	XM_001720521.1	ILMN_347350	LOC100133042	XM_001720521.1	XM_001720521.1		100133042	169204393	XM_001720521.1	LOC100133042	XP_001720573.1	ILMN_3245441	0000540142	S	427	GATACCAAAGTTGTCATGGATGACCTTGGCCAGGGGTGCTAAGCAGTTGG	12	-	6516752-6516801	12p13.31d	PREDICTED: Homo sapiens hypothetical protein LOC100133042 (LOC100133042), mRNA.					
Homo sapiens	RefSeq	XM_091914.4	ILMN_182123	ZNF846	NM_001077624.1	NM_001077624.1		162993	117938300	NM_001077624.1	ZNF846	NP_001071092.1	ILMN_1737568	0007510605	S	1819	GCTTTCACTCAATCCTCGGGCCTTAGTACCCATTTAAGAACTCACACTGG	19	-	9868415-9868464	19p13.2c	Homo sapiens zinc finger protein 846 (ZNF846), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_001721288.1	ILMN_350150	GGNBP1	XM_001721288.1	XM_001721288.1		449520	169168950	XM_001721288.1	GGNBP1	XP_001721340.1	ILMN_3270462	0000380524	M	901	GTCGCCCAGTGCCTGCTTCTTGAGGAGAAAGGTGAGATGGGAAACTGGCC				6p21.31f	PREDICTED: Homo sapiens gametogenetin binding protein 1, transcript variant 2 (GGNBP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XR_039595.1	ILMN_351162	LOC728572	XR_039595.1	XR_039595.1		728572	169165418	XR_039595.1	LOC728572		ILMN_3305899	0007380086	M	136	GCGGAAACCCAGAGGTATTGACGACAGGGTTCATAGAAGGTTCAAGAGCC				3p24.2a	PREDICTED: Homo sapiens misc_RNA (LOC728572), miscRNA.					
Homo sapiens	RefSeq	NM_001009957.1	ILMN_3621	ZNF655	NM_001009957.1	NM_001009957.1		79027	58331259	NM_001009957.1	ZNF655	NP_001009957.1	ILMN_1765254	0005260600	I	748	CTTCGGAGACCTGGACTTCACATAAACCAACTTCCCATCTCCCCAGTGCC	7	+	98997665-98997714	7q22.1b	Homo sapiens zinc finger protein 655 (ZNF655), transcript variant 5, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15558030] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	VIK-1; FLJ23461; MGC5521; VIK; DKFZp686M1631; MGC10859; MGC16203	VIK-1; FLJ23461; MGC5521; VIK; DKFZp686M1631; MGC10859; MGC16203
Homo sapiens	RefSeq	NM_030812.1	ILMN_23903	ACTL8	NM_030812.1	NM_030812.1		81569	32698756	NM_030812.1	ACTL8	NP_110439.1	ILMN_1704078	0001450100	S	1502	GCAGGGGACAGTTTTTCCAGGGTGGCCTATCATTGGGGTATGAGTGGCTG	1	+	18025822-18025871	1p36.13d	Homo sapiens actin-like 8 (ACTL8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_939484.3	ILMN_40447	LOC728658	XM_939484.3	XM_939484.3		728658	169201169	XM_939484.3	LOC728658	XP_944577.1	ILMN_3220792	0006350064	A	112	AGGTACTGCTGGGCCGGAAGGTGGTGGTTGTACGCTGTGAAGGCATCAAC				10q24.1a	PREDICTED: Homo sapiens similar to 23 kD highly basic protein, transcript variant 1 (LOC728658), mRNA.					
Homo sapiens	RefSeq	XM_939484.3	ILMN_40447	LOC728658	XM_939484.3	XM_939484.3		728658	169201169	XM_939484.3	LOC728658	XP_944577.1	ILMN_3297317	0000940528	M	111	CAGGTACTGCTGGGCCGGAAGGTGGTGGTTGTACGCTGTGAAGGCATCAA				10q24.1a	PREDICTED: Homo sapiens similar to 23 kD highly basic protein, transcript variant 1 (LOC728658), mRNA.					
Homo sapiens	RefSeq	NM_001064.1	ILMN_2726	TKT	NM_001064.1	NM_001064.1		7086	4507520	NM_001064.1	TKT	NP_001055.1	ILMN_1736597	0006860202	S	1689	TTATGAAGGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGAGC	3	-	53234945-53234987:53235812-53235818	3p21.1c	Homo sapiens transketolase (Wernicke-Korsakoff syndrome) (TKT), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9357955] [evidence EXP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [evidence IEA]	Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [pmid 9357955] [evidence EXP]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-ribose 5-phosphate + D-xylulose 5-phosphate [goid 4802] [pmid 8419340] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TKT1; FLJ34765	TKT1; FLJ34765
Homo sapiens	RefSeq	NM_002440.2	ILMN_14086	MSH4	NM_002440.2	NM_002440.2		4438	36949365	NM_002440.2	MSH4	NP_002431.2	ILMN_1653146	0002900754	S	2692	GACAGAGAGCTGTGTACCATCTAGCCACTAGGCTTGTTCAAACTGCTCGA	1	+	76151000-76151049	1p31.1g	Homo sapiens mutS homolog 4 (E. coli) (MSH4), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9299235] [evidence TAS]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby the side by side pairing and physical juxtaposition of homologous chromosomes is created at the metaphase plate [goid 7129] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9299235] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9299235] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]		
Homo sapiens	RefSeq	NM_014864.2	ILMN_9442	FAM20B	NM_014864.2	NM_014864.2		9917	41281529	NM_014864.2	FAM20B	NP_055679.1	ILMN_1811373	0007650414	S	5612	CCCTTCAATTCCTCAAGTCTGGGTGGTGACAAGGTAGGGGCTAGGTACTG	1	+	177311991-177312040	1q25.2c	Homo sapiens family with sequence similarity 20, member B (FAM20B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	RefSeq	NM_002940.1	ILMN_180762	ABCE1	NM_001040876.1	NM_001040876.1		6059	108773783	NM_001040876.1	ABCE1	NP_001035809.1	ILMN_1676846	0005310152	S	3314	GATTACCTGGAGCCTGGAGCCACTTTAAGTTGTACTTCTGACTAAACTGG	4	+	146049799-146049848	4q31.22a	Homo sapiens ATP-binding cassette, sub-family E (OABP), member 1 (ABCE1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11585831] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11585831] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 6401] [pmid 7539425] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 7539425] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stops, prevents or reduces the activity of a ribonuclease, any enzyme that catalyzes the hydrolysis of phosphodiester bonds in chains of RNA [goid 8428] [pmid 7539425] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	ABC38; OABP; RNASEL1; RLI; RNS4I; RNASELI	ABC38; OABP; RNASEL1; RLI; RNASELI; RNS4I
Homo sapiens	RefSeq	NM_001040876.1	ILMN_180762	ABCE1	NM_001040876.1	NM_001040876.1		6059	108773783	NM_001040876.1	ABCE1	NP_001035809.1	ILMN_2330267	0001090543	A	3293	GAGTTCCTGAATTTTGAACAGGATTACCTGGAGCCTGGAGCCACTTTAAG	4	+	146049778-146049827	4q31.22a	Homo sapiens ATP-binding cassette, sub-family E (OABP), member 1 (ABCE1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11585831] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11585831] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 6401] [pmid 7539425] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 7539425] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Stops, prevents or reduces the activity of a ribonuclease, any enzyme that catalyzes the hydrolysis of phosphodiester bonds in chains of RNA [goid 8428] [pmid 7539425] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	ABC38; OABP; RNASEL1; RLI; RNS4I; RNASELI	ABC38; OABP; RNASEL1; RLI; RNS4I; RNASELI
Homo sapiens	RefSeq	NM_206997.1	ILMN_7047	GPR152	NM_206997.1	NM_206997.1		390212	46243670	NM_206997.1	GPR152	NP_996880.1	ILMN_1659982	0000050259	S	1224	CAGGCAGACACTAACGTCCAGACCCCTGCACCTGCTGCCAGTTCTGTGCC	11	-	67218927-67218976	11q13.1f	Homo sapiens G protein-coupled receptor 152 (GPR152), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PGR5; MGC148162	PGR5; MGC148162
Homo sapiens	RefSeq	NR_024339.1	ILMN_371408	C14ORF53	NR_024339.1	NR_024339.1		440184	210147594	NR_024339.1	C14orf53		ILMN_3190621	0006840450	A	729	TTCCTGGGTCCCAAGCATTTCCTTGAGCTCTTCTGAGAAAAACCTGAACG	14	+	66958898-66958912:66963545-66963579	14q23.3b	Homo sapiens chromosome 14 open reading frame 53 (C14orf53), transcript variant 2, non-coding RNA.					
Homo sapiens	RefSeq	NM_025029.2	ILMN_24321	FAM128B	NM_025029.2	NM_025029.2		80097	46094069	NM_025029.2	FAM128B	NP_079305.2	ILMN_1717184	0000610280	S	60	GGAGGCCAGACGTTGACGCTGCAGGGAGAGGGTGGTGGGCGCAGCCGCTA	2	+	130656232-130656281	2q21.1b	Homo sapiens family with sequence similarity 128, member B (FAM128B), mRNA.				FLJ14346; MGC87017	FLJ14346; MGC87017
Homo sapiens	RefSeq	NR_003059.1	ILMN_168101	SNORD71	NR_003059.1	NR_003059.1		692111	94967020	NR_003059.1	SNORD71		ILMN_3239272	0000020543	S	5	TGTTGGAGGATGAAAGTACGGAGTGATCCATCGGCTAAGTGTCTTGTCAC	16	-	71792336-71792385	16q22.3a	Homo sapiens small nucleolar RNA, C/D box 71 (SNORD71), small nucleolar RNA.				HBII-239	HBII-239
Homo sapiens	RefSeq	NM_000513.1	ILMN_182371	OPN1MW	NM_000513.1	NM_000513.1		2652	4503964	NM_000513.1	OPN1MW	NP_000504.1	ILMN_1698444	0000290082	S	692	CACTCAGCATCATCGTGCTCTGCTACCTCCAAGTGTGGCTGGCCATCCGA	X	+	153110486-153110535	Xq28g	Homo sapiens opsin 1 (cone pigments), medium-wave-sensitive (OPN1MW), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2937147] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 2937147] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10319869] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [pmid 1302020] [evidence TAS]	CBBM; CBD; OPN1MW1; GCP	DCB; CBBM; CBD; OPN1MW1; GCP
Homo sapiens	RefSeq	NM_000513.1	ILMN_182371	OPN1MW	NM_000513.1	NM_000513.1		2652	4503964	NM_000513.1	OPN1MW	NP_000504.1	ILMN_2199843	0003840408	S	185	TTGTGGTCATTGCATCCGTTTTCACAAATGGGCTTGTGCTGGCGGCCACC	X	+	153106525-153106574	Xq28g	Homo sapiens opsin 1 (cone pigments), medium-wave-sensitive (OPN1MW), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2937147] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 2937147] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10319869] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation [goid 9881] [pmid 1302020] [evidence TAS]	CBBM; CBD; OPN1MW1; GCP	CBBM; CBD; OPN1MW1; GCP
Homo sapiens	RefSeq	NM_177967.2	ILMN_15382	UBAC2	NM_177967.2	NM_177967.2		337867	31342615	NM_177967.2	UBAC2	NP_808882.1	ILMN_1713993	0006580521	S	2368	AGAGGGAAGGCAGGGGTGGACCGCCATGAGCATGAAAAGACCCGAAGCAA	13	+	98836525-98836574	13q32.3a	Homo sapiens UBA domain containing 2 (UBAC2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ30548; MGC90487; FLJ26351; FLJ42413; PHGDHL1; FLJ30001	FLJ30548; MGC90487; FLJ26351; FLJ42413; PHGDHL1; FLJ30001
Homo sapiens	RefSeq	XM_940432.1	ILMN_46564	LOC651301	XM_940432.1	XM_940432.1		651301	88968966	XM_940432.1	LOC651301	XP_945525.1	ILMN_1767471	0004830170	S	313	GGTATGGACGCGCTGCCTTCGTCCGCCTTCCTGCTTAACAACCTGCTCGA					PREDICTED: Homo sapiens similar to abnormal cell LINeage family member (lin-41) (LOC651301), mRNA.					
Homo sapiens	RefSeq	XM_372815.2	ILMN_21887	LOC391165	XM_372815.2	XM_372815.2		391165	51458240	XM_372815.2	LOC391165	XP_372815.2	ILMN_1738158	0001450152	A	268	CCAAAGCTCATGAATAAAACTCCCCAGCCAGGGTGTCGCAAGGGCTGCCG	1	+	216578707-216578717:216585656-216585694		PREDICTED: Homo sapiens similar to 40S ribosomal protein S26 (LOC391165), mRNA.					
Homo sapiens	RefSeq	NM_015196.2	ILMN_3689	KIAA0922	NM_015196.2	NM_015196.2		23240	35038563	NM_015196.2	KIAA0922	NP_056011.2	ILMN_1668469	0001010152	S	4573	CCGAAGCTTGTCTCCAATGTCTGGACTTTTTGGTTCCATCTGGGCCCCGC	4	+	154776920-154776969	4q31.3d	Homo sapiens KIAA0922 (KIAA0922), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ10592; TMEM131L; DKFZp586H1322	FLJ10592; TMEM131L; DKFZp586H1322
Homo sapiens	RefSeq	NM_004066.1	ILMN_23662	CETN1	NM_004066.1	NM_004066.1		1068	4757973	NM_004066.1	CETN1	NP_004057.1	ILMN_1768624	0003310500	S	630	CGGCTGCCTGTCCCTTCTTCACCCCCTCACCCCCATAATTTGTCTAGATC	18	+	570996-571045	18p11.32c	Homo sapiens centrin, EF-hand protein, 1 (CETN1), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 8175926] [evidence TAS]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [pmid 8175926] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 8175926] [evidence TAS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 8175926] [evidence TAS]; Separation of duplicated centrosome components at the beginning of mitosis. The centriole pair within each centrosome becomes part of a separate microtubule organizing center that nucleates a radial array of microtubules called an aster. The two asters move to opposite sides of the nucleus to form the two poles of the mitotic spindle [goid 7100] [pmid 8175926] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8175926] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	CEN1; CETN	CEN1; CETN
Homo sapiens	RefSeq	NM_004066.1	ILMN_23662	CETN1	NM_004066.1	NM_004066.1		1068	4757973	NM_004066.1	CETN1	NP_004057.1	ILMN_2132309	0003520097	S	827	GAACTTGCTGTTCATCTGTTGATCTGGAGGCAGGACAGCTTCTGGGACAC	18	+	571193-571242	18p11.32c	Homo sapiens centrin, EF-hand protein, 1 (CETN1), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 8175926] [evidence TAS]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [pmid 8175926] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 8175926] [evidence TAS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 8175926] [evidence TAS]; Separation of duplicated centrosome components at the beginning of mitosis. The centriole pair within each centrosome becomes part of a separate microtubule organizing center that nucleates a radial array of microtubules called an aster. The two asters move to opposite sides of the nucleus to form the two poles of the mitotic spindle [goid 7100] [pmid 8175926] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8175926] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	CEN1; CETN	CEN1; CETN
Homo sapiens	RefSeq	XM_931395.1	ILMN_31686	LOC643189	XM_931395.1	XM_931395.1		643189	89033754	XM_931395.1	LOC643189	XP_936488.1	ILMN_1670005	0005810402	S	136	CACCGCCCCTCTCTCAGGCCAGAAGGTGCGCGCAGCGGCGCTAGACTTCG	11	+	3775059-3775108	11p15.4d	PREDICTED: Homo sapiens hypothetical LOC643189 (LOC643189), mRNA.					
Homo sapiens	RefSeq	NM_153268.1	ILMN_13206	PLCXD2	NM_153268.1	NM_153268.1		257068	23397569	NM_153268.1	PLCXD2	NP_695000.1	ILMN_1670365	0002680280	S	1943	CTGAGGAGGGAGGAGGCTCCAATACGACTACTCCCAATTCACAGGGTTTG	3	+	113047864-113047913	3q13.2a	Homo sapiens phosphatidylinositol-specific phospholipase C, X domain containing 2 (PLCXD2), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ31579	FLJ31579
Homo sapiens	RefSeq	XM_943660.1	ILMN_34513	LOC649350	XM_943660.1	XM_943660.1		649350	88988386	XM_943660.1	LOC649350	XP_948753.1	ILMN_1657266	0006220239	S	71	TGCTTTGGAGATGAGGAAACAAACTCTTATGGAGACCTAAGAGACTGAAG					PREDICTED: Homo sapiens hypothetical protein LOC649350 (LOC649350), mRNA.					
Homo sapiens	RefSeq	XM_001716364.1	ILMN_334773	LOC100128105	XM_001716364.1	XM_001716364.1		100128105	169211553	XM_001716364.1	LOC100128105	XP_001716416.1	ILMN_3252901	0005550754	M	402	GTGCTCTTCTGGGATCTTCAACAACAGAAAACACCCAGTTAAGCCCAGCG				17q25.3e	PREDICTED: Homo sapiens hypothetical LOC100128105 (LOC100128105), mRNA.					
Homo sapiens	RefSeq	NM_005963.2	ILMN_4300	MYH1	NM_005963.2	NM_005963.2		4619	7669505	NM_005963.2	MYH1	NP_005954.2	ILMN_1798923	0006290484	S	5664	AGCGGAGGAACAATCCAACGTCAACCTCTCCAAATTCCGGAGGATCCAGC	17	-	10336564-10336610:10338396-10338398	17p13.1a	Homo sapiens myosin, heavy polypeptide 1, skeletal muscle, adult (MYH1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 18029348] [evidence IDA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MyHC-2X/D; MYHa; MYHSA1	MyHC-2X/D; MYHa; MYHSA1
Homo sapiens	RefSeq	NM_000727.2	ILMN_22422	CACNG1	NM_000727.2	NM_000727.2		786	22027542	NM_000727.2	CACNG1	NP_000718.1	ILMN_1724306	0000460161	S	1141	TCTCGGTGATAAAACACACCCTCTCTGGTGAGCCCAGCGTCCCCTCCTTG	17	+	62483250-62483299	17q24.2a	Homo sapiens calcium channel, voltage-dependent, gamma subunit 1 (CACNG1), mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 8387489] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8387489] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA];  [goid 15270] [pmid 8387489] [evidence TAS]	CACNLG	CACNLG
Homo sapiens	RefSeq	NM_018389.3	ILMN_28623	SLC35C1	NM_018389.3	NM_018389.3		55343	37059730	NM_018389.3	SLC35C1	NP_060859.3	ILMN_1680104	0000940672	S	2575	AGGGTGGCTTGCAGTCCCTGGCCCTTCTGGTGGGCATTTGGTATGTCCTT	11	+	45790925-45790974	11p11.2c	Homo sapiens solute carrier family 35, member C1 (SLC35C1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	FLJ14841; FUCT1; FLJ11320	FLJ14841; FUCT1; FLJ11320
Homo sapiens	RefSeq	NM_032017.1	ILMN_25410	STK40	NM_032017.1	NM_032017.1		83931	31543197	NM_032017.1	STK40	NP_114406.1	ILMN_1679311	0001850717	S	3357	GGGCCAGGGTCTTGTGCTGTGGGGCTGGGGGATGCCCTCTTTTCTATATT	1	-	36805664-36805713	1p34.3d	Homo sapiens serine/threonine kinase 40 (STK40), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SgK495; SHIK; RP11-268J15.4; MGC4796	SgK495; SHIK; RP11-268J15.4; MGC4796
Homo sapiens	RefSeq	NM_032017.1	ILMN_25410	STK40	NM_032017.1	NM_032017.1		83931	31543197	NM_032017.1	STK40	NP_114406.1	ILMN_2075927	0003840521	S	3623	GACAGACTGGGCCCTTCCAAGGTCAAGCCATGTGTCTGATGACATTCCTG	1	-	36805398-36805447	1p34.3d	Homo sapiens serine/threonine kinase 40 (STK40), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SgK495; SHIK; RP11-268J15.4; MGC4796	SgK495; SHIK; RP11-268J15.4; MGC4796
Homo sapiens	RefSeq	NM_020996.1	ILMN_28260	FGF6	NM_020996.1	NM_020996.1		2251	10337586	NM_020996.1	FGF6	NP_066276.2	ILMN_1764605	0000780414	S	238	TAGCTGGAGAGATTGCCGGGGTGAACTGGGAAAGTGGCTATTTGGTGGGG	12	-	4554493-4554542	12p13.32a	Homo sapiens fibroblast growth factor 6 (FGF6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9139660] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1697263] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2649847] [evidence TAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2649847] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2649847] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2649847] [evidence TAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45445] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 2649847] [evidence TAS]	HST2; HBGF-6	HST2; HBGF-6
Homo sapiens	RefSeq	NM_003488.2	ILMN_10706	AKAP1	NM_003488.3	NM_003488.3		8165	109637793	NM_003488.3	AKAP1	NP_003479.1	ILMN_1712530	0004810494	A	3367	TCAGGGAGCAAGACATGAACTGACTAATTGGTATCCACTACTTGTACAGC	17	+	52553108-52553157	17q22c	Homo sapiens A kinase (PRKA) anchor protein 1 (AKAP1), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8769136] [evidence TAS]	D-AKAP1; AKAP149; MGC1807; AKAP121; SAKAP84; PRKA1; AKAP; AKAP84	D-AKAP1; AKAP149; MGC1807; AKAP121; SAKAP84; PRKA1; AKAP; AKAP84
Homo sapiens	RefSeq	NM_024490.3	ILMN_27047	ATP10A	NM_024490.3	NM_024490.3		57194	157649070	NM_024490.3	ATP10A	NP_077816.1	ILMN_3307935	0001580301	S	4956	TGCAGGCAGGTGTGAACATGGGGGAACAATGAGCAGAGATGGCAGAGGGC	15	-	25924088-25924137	15q12a	Homo sapiens ATPase, class V, type 10A (ATP10A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11353404] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 11353404] [evidence NAS]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [pmid 11353404] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]	ATP10C; KIAA0566; ATPVC; ATPVA	ATP10C; KIAA0566; ATPVC; ATPVA
Homo sapiens	RefSeq	NM_006576.2	ILMN_20148	AVIL	NM_006576.2	NM_006576.2		10677	17572823	NM_006576.2	AVIL	NP_006567.2	ILMN_1674265	0004390369	S	2339	GGAGCTGCCTGAGGATGTAAACCCTGCCAAAAAGGAGAATTACCTCTCTG	12	-	58191765-58191778:58193578-58193613	12q14.1a	Homo sapiens advillin (AVIL), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9664034] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9664034] [evidence TAS]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DOC6; ADVIL; p92; DKFZp779O1812; FLJ12386; MGC133244	DOC6; ADVIL; p92; DKFZp779O1812; FLJ12386; MGC133244
Homo sapiens	RefSeq	XM_372138.4	ILMN_45568	LOC389786	XM_372138.4	XM_372138.4		389786	89029976	XM_372138.4	LOC389786	XP_372138.3	ILMN_1652740	0003800390	S	201	GTTCCCCAGCTCTGTGACATCACAGACAGCCTTCTGTCTACTCTGCCAGC	9	-	116484140-116484189		PREDICTED: Homo sapiens hypothetical LOC389786 (LOC389786), mRNA.					
Homo sapiens	Unigene	Hs.353387	ILMN_87257	HS.353387	Hs.353387		Hs.353387		21733283	AL832704			ILMN_1850594	0001570044	S	1782	GTGCTGGTAGTggtggcagtggtgatggtggtgttggcggggttgatgat					Homo sapiens mRNA; cDNA DKFZp313A1935 (from clone DKFZp313A1935)					
Homo sapiens	RefSeq	NM_198520.2	ILMN_27749	C12ORF63	NM_198520.2	NM_198520.2		374467	112420959	NM_198520.2	C12orf63	NP_940922.2	ILMN_3241071	0002260224	S	3463	GCCTGGATTGCAATAAGAGCTGCTGCACAGGTCAGTGAAGCTGTGCTGGC	12	+	95682129-95682158:95682986-95683005	12q23.1a	Homo sapiens chromosome 12 open reading frame 63 (C12orf63), mRNA.				FLJ44112	
Homo sapiens	RefSeq	NM_178831.4	ILMN_18755	GATS	NM_178831.4	NM_178831.4		352954	54020721	NM_178831.4	GATS	NP_849153.3	ILMN_1699631	0002190541	S	3378	ACACCTTGTAAGTGTCCCCTCTGGTTTCCTCGGTGGTGGCGCCCTGAACT	7	-	99644561-99644610	7q22.1c	Homo sapiens opposite strand transcription unit to STAG3 (GATS), mRNA.				DKFZp686B07267	DKFZp686B07267
Homo sapiens	RefSeq	NM_174901.4	ILMN_17230	FAM9C	NM_174901.4	NM_174901.4		171484	116089285	NM_174901.4	FAM9C	NP_777561.1	ILMN_2098705	0000670632	S	688	GGGAAAGGAACTGAAAGAGATTGAGCCACCACACGAGCAATTCACAAAGC	X	-	13054136-13054137:13056535-13056559:13056560-13056582	Xp22.2	Homo sapiens family with sequence similarity 9, member C (FAM9C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	RefSeq	NM_002271.4	ILMN_174512	IPO5	NM_002271.4	NM_002271.4		3843	51873051	NM_002271.4	IPO5	NP_002262.3	ILMN_2166384	0001440632	S	5301	GCTGGGCACTATGCTAAGCACTTTGGGAGCAAGAACCTCCTACCTTCCAG	13	+	97473850-97473899	13q32.2a	Homo sapiens importin 5 (IPO5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9114010] [evidence TAS]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 9271386] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9114010] [evidence TAS]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [evidence IEA]; The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane [goid 6607] [pmid 9114010] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Stops, prevents or reduces the activity of any enzyme that catalyzes the hydrolysis of GTP to GDP and orthophosphate [goid 5095] [pmid 9271386] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15282309] [evidence IPI]; Interacting selectively with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly [goid 8536] [pmid 9114010] [evidence TAS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	MGC2068; FLJ43041; IMB3; KPNB3; IPO5; DKFZp686O1576	FLJ43041; IMB3; KPNB3; MGC2068; IPO5; DKFZp686O1576
Homo sapiens	RefSeq	NM_020889.2	ILMN_8914	PHF12	NM_020889.2	NM_020889.2		57649	75677337	NM_020889.2	PHF12	NP_065940.1	ILMN_1772253	0002710750	I	2870	GGAACCACAGCCCAGGTCTCCTGACTCCATCCCATACCTTCCAGGCCTAG	17	-	27239199-27239248	17q11.2a	Homo sapiens PHD finger protein 12 (PHF12), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11390640] [evidence IDA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [pmid 11390640] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11390640] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11390640] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 11390640] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1523; PF1; FLJ34122; MGC131914	KIAA1523; PF1; FLJ34122; MGC131914
Homo sapiens	RefSeq	XR_041090.1	ILMN_351351	NS3BP	XR_041090.1	XR_041090.1		171391	169202332	XR_041090.1	NS3BP		ILMN_3305980	0006770228	M	2010	TCGAAGTCCATGGGCACCAGAAGCACCGCCTCAGAGACTCACAGACTCAG	11	+	770763-770812	11p15.5c	PREDICTED: Homo sapiens misc_RNA (NS3BP), miscRNA.					
Homo sapiens	RefSeq	NM_001005188.1	ILMN_29752	OR6X1	NM_001005188.1	NM_001005188.1		390260	52353273	NM_001005188.1	OR6X1	NP_001005188.1	ILMN_1756210	0006020156	S	429	CCTGAGCTCCTGGGTGGTGGGCTTCACCATTGTCTTTTGTCAGACGATGC	11	-	123624748-123624797	11q24.1c	Homo sapiens olfactory receptor, family 6, subfamily X, member 1 (OR6X1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-270	OR11-270
Homo sapiens	RefSeq	XM_001725355.1	ILMN_350139	LOC100130065	XM_001725355.1	XM_001725355.1		100130065	169165397	XM_001725355.1	LOC100130065	XP_001725407.1	ILMN_3270442	0003170307	M	37	AACCAAGTGCCTGCAGGGTTGGAGAAATGGCTCTGCGCCACAGCCTCCAT				3p22.2a	PREDICTED: Homo sapiens similar to D-dopachrome tautomerase (LOC100130065), mRNA.					
Homo sapiens	RefSeq	NM_001401.3	ILMN_28278	LPAR1	NM_057159.2	NM_057159.2		1902	45580698	NM_057159.2	LPAR1	NP_476500.1	ILMN_1701441	0001050356	A	3057	CTTTGTTTGAGGGACTCGTTATCCAGCTCTTGGTAGCCACACCTGCAATG	9	-	113636115-113636164	9q31.3b	Homo sapiens lysophosphatidic acid receptor 1 (LPAR1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9070858] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9070858] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8922387] [evidence TAS]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 9804623] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9804623] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	vzg-1; Gpcr26; Mrec1.3; edg-2; rec.1.3; LPA1; LPAR1	Mrec1.3; edg-2; rec.1.3; LPA1; LPAR1; vzg-1; Gpcr26
Homo sapiens	RefSeq	NM_057159.2	ILMN_28278	LPAR1	NM_057159.2	NM_057159.2		1902	45580698	NM_057159.2	LPAR1	NP_476500.1	ILMN_1674984	0003450470	I	251	CGTCTGATTTATGAAGCTCCCCATCCACCTATCTGAGTACCTGACTTCTC	9	-	113735783-113735832	9q31.3b	Homo sapiens lysophosphatidic acid receptor 1 (LPAR1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9070858] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9070858] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8922387] [evidence TAS]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 9804623] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9804623] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	vzg-1; Gpcr26; Mrec1.3; edg-2; rec.1.3; LPA1; LPAR1	Mrec1.3; edg-2; rec.1.3; LPA1; LPAR1; vzg-1; Gpcr26
Homo sapiens	RefSeq	NM_016358.1	ILMN_183473	IRX4	NM_016358.1	NM_016358.1		50805	7705554	NM_016358.1	IRX4	NP_057442.1	ILMN_1684108	0007000167	S	2045	GCCTGTCGGGCCTCCGATTTCATCCTCAGACGTAATGCTCACCAACAGCA	5	-	1930667-1930716	5p15.33c	Homo sapiens iroquois homeobox 4 (IRX4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 10625552] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC131996	MGC131996
Homo sapiens	RefSeq	NM_181309.1	ILMN_19921	IL22RA2	NM_181309.1	NM_181309.1		116379	31317240	NM_181309.1	IL22RA2	NP_851826.1	ILMN_2307721	0004810458	A	2310	GGGGGTGGAGGAGAATAAGAGGCAGAGCAAGAGCTAGAGAATTGGTTTCC	6	-	137507091-137507140	6q23.3c	Homo sapiens interleukin 22 receptor, alpha 2 (IL22RA2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11390453] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11390454] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence ISS]; Any process that modulates the frequency, rate or extent of introducing a phosphate group to a tyrosine residue of a Stat3 protein [goid 42516] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with interleukin-22 to initiate a change in cell activity [goid 42018] [pmid 11390454] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CRF2-S1; MGC150509; IL-22BP; MGC150510; CRF2-10; CRF2X	CRF2-S1; MGC150509; IL-22BP; MGC150510; CRF2-10; CRF2X
Homo sapiens	Unigene	Hs.569711	ILMN_121892	HS.569711	Hs.569711		Hs.569711		15161146	AL598455			ILMN_1876620	0000070500	S	1	GAGGCTGAGGAATAGACCTAGTTCCTGCAGCAGATCAAAATGGTAGCCCC	17	-	67548416-67548465		DKFZp313H1820_r1 313 (synonym: hlcc2) Homo sapiens cDNA clone DKFZp313H1820 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001002236.1	ILMN_30268	SERPINA1	NM_001002236.1	NM_001002236.1		5265	50363218	NM_001002236.1	SERPINA1	NP_001002236.1	ILMN_2338452	0000730047	A	1385	CCTGCCTGATGAGGGGAAACTACAGCACCTGGAAAATGAACTCACCCACG	14	-	93916997-93917046	14q32.13a	Homo sapiens serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 (SERPINA1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 59727] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16192646] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 59727] [evidence EXP]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 12878203] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16192646] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15845869] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12878203] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PI1; MGC23330; PRO2275; A1AT; AAT; MGC9222; PI; A1A	PI1; MGC23330; PRO2275; A1AT; AAT; MGC9222; PI; A1A
Homo sapiens	RefSeq	NM_001002236.1	ILMN_30268	SERPINA1	NM_001002236.1	NM_001002236.1		5265	50363218	NM_001002236.1	SERPINA1	NP_001002236.1	ILMN_2256050	0006020097	I	388	CCCTCCACCTTGGACACAGGACGCTGTGGTTTCTGAGCCAGGTACAATGA	14	-	93924899-93924948	14q32.13a	Homo sapiens serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 (SERPINA1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 59727] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16192646] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 59727] [evidence EXP]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 12878203] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16192646] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15845869] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12878203] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PI1; MGC23330; PRO2275; A1AT; AAT; MGC9222; PI; A1A	PI1; MGC23330; PRO2275; A1AT; AAT; MGC9222; PI; A1A
Homo sapiens	RefSeq	NM_006499.3	ILMN_12715	LGALS8	NM_006499.3	NM_006499.3		3964	42544184	NM_006499.3	LGALS8	NP_006490.3	ILMN_2353358	0000540020	A	2447	CCCATGAAATCACCAATCAAGGCCTCCGTTCTTCTAAAGATTAGTCCATC	1	+	234779070-234779119	1q43a	Homo sapiens lectin, galactoside-binding, soluble, 8 (LGALS8), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8692978] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 8692978] [evidence TAS]	Gal-8; PCTA-1; Po66-CBP; PCTA1	Gal-8; PCTA-1; Po66-CBP; PCTA1
Homo sapiens	RefSeq	NM_022904.1	ILMN_306825	RASAL3	NM_022904.1	NM_022904.1		64926	130502161	NM_022904.1	RASAL3	NP_075055.1	ILMN_3238803	0000360039	S	3064	GGTCTTGGAGTCAACCCCAGCCCCTCAAAGCACCCTGCCTCAATGGAGAC	19	-	15562614-15562663	19p13.12a	Homo sapiens RAS protein activator like 3 (RASAL3), mRNA.				DKFZp667E013; FLJ00087	DKFZp667E013; FLJ00087
Homo sapiens	RefSeq	XM_937586.1	ILMN_306825	RASAL3	NM_022904.1	NM_022904.1		64926	130502161	NM_022904.1	RASAL3	NP_075055.1	ILMN_1795089	0000520273	A	3218	AGTGGGGAGTGGAGCTGCTGGTCCCAACCACTCTGGCAGTATGAAGTTGC	19	-	15562460-15562509	19p13.12a	Homo sapiens RAS protein activator like 3 (RASAL3), mRNA.				DKFZp667E013; FLJ00087	
Homo sapiens	RefSeq	XM_931507.1	ILMN_38558	LOC643377	XM_931507.1	XM_931507.1		643377	88953777	XM_931507.1	LOC643377	XP_936600.1	ILMN_1653193	0004070040	S	254	AAAGTTTTCCTAGGGCGTTTTGTTTGTGCAAACTCGGCCGGAGGAGCCTG	2	-	165406361-165406410	2q24.3b	PREDICTED: Homo sapiens hypothetical LOC643377 (LOC643377), mRNA.					
Homo sapiens	RefSeq	XM_938691.1	ILMN_43178	LOC649620	XM_938691.1	XM_938691.1		649620	89061524	XM_938691.1	LOC649620	XP_943784.1	ILMN_1726144	0007380754	S	36	CTCTACAACATTTTGGCATCTTCAAAAAGATGGTGCTCTTTCAGTTCTGT					PREDICTED: Homo sapiens similar to Cell division cycle protein 27 homolog (CDC27Hs) (H-NUC) (LOC649620), mRNA.					
Homo sapiens	RefSeq	NM_014714.2	ILMN_3437	IFT140	NM_014714.2	NM_014714.2		9742	41281446	NM_014714.2	IFT140	NP_055529.2	ILMN_1687037	0006960376	S	4616	TTGCTCTGTCCCACCTGCCTCTGGGTGCCCGGCAGCTCCACTAGATTTTT	16	-	1500700-1500749	16p13.3e	Homo sapiens intraflagellar transport 140 homolog (Chlamydomonas) (IFT140), mRNA.	Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]			c380F5.1; WDTC2; c305C8.4; FLJ10306; FLJ30571; gs114; DKFZp564L232; KIAA0590	c380F5.1; WDTC2; c305C8.4; FLJ10306; FLJ30571; gs114; DKFZp564L232; KIAA0590
Homo sapiens	RefSeq	NM_203375.1	ILMN_167542	LOC284912	NM_203375.1	NM_203375.1		284912	42794615	NM_203375.1	LOC284912	NP_976309.1	ILMN_1804213	0001260709	S	536	GATGACGGGCACTCTGGTTAAATGACTCTCTCCAGCCTCCAAGTTCAACC	22	-	34353248-34353297	22q12.3c	Homo sapiens hypothetical gene supported by BC001801 (LOC284912), mRNA.				MGC3170	MGC3170
Homo sapiens	RefSeq	NM_001001957.2	ILMN_28357	OR2W3	NM_001001957.2	NM_001001957.2		343171	68533231	NM_001001957.2	OR2W3	NP_001001957.2	ILMN_1811927	0000430356	S	597	CTTTGTCCTGGCGGTGGGTGTTGTGCTGTCCCCCTTGGTGTTTATCCTGC	1	+	246126108-246126157	1q44e	Homo sapiens olfactory receptor, family 2, subfamily W, member 3 (OR2W3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2W8P; OR2W3P; OST718	OR2W8P; OR2W3P; OST718
Homo sapiens	RefSeq	XR_039703.1	ILMN_335763	LOC100128889	XR_039703.1	XR_039703.1		100128889	169162611	XR_039703.1	LOC100128889		ILMN_3177454	0007560537	A	778	ACCAACTTTTAAATTCGTCATATGGCCCCTTGGGAAATATCCTGAATCCC	1	-	173085102-173085151	1q25.1b	PREDICTED: Homo sapiens misc_RNA (LOC100128889), miscRNA.					
Homo sapiens	RefSeq	NM_005849.1	ILMN_7979	IGSF6	NM_005849.1	NM_005849.1		10261	5031672	NM_005849.1	IGSF6	NP_005840.1	ILMN_1653498	0003850202	S	416	TGTGCCGGAAGCGAGAGCTAAACAGACAGGAGGAGGGACCACACTGGTGG	16	-	21565960-21566009	16p12.2a	Homo sapiens immunoglobulin superfamily, member 6 (IGSF6), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9809579] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9809579] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9809579] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9809579] [evidence TAS]	DORA	DORA
Homo sapiens	RefSeq	NM_175624.1	ILMN_41605	RAB3IP	NM_175624.2	NM_175624.2		117177	90855775	NM_175624.2	RAB3IP	NP_783323.1	ILMN_1803197	0001990390	A	1480	GGAACTCTGATGCTCTGCGTGGGACCATGCCTGAACTCCCCGAATAACTG	12	+	68495484-68495533	12q15c	Homo sapiens RAB3A interacting protein (rabin3) (RAB3IP), transcript variant beta 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12007189] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 17574030] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12007189] [evidence IDA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [pmid 17574030] [evidence TAS]	The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis [goid 6893] [pmid 17574030] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; A process by which a protein is transported to, or maintained in, a location within an organelle [goid 33365] [pmid 17574030] [evidence IMP]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [pmid 17574030] [evidence IMP]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17574030] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12007189] [evidence IPI]	MGC71495; RABIN3; FLJ22548; FLJ14660	MGC71495; RABIN3; FLJ22548; FLJ14660
Homo sapiens	RefSeq	NM_004720.4	ILMN_4660	EDG4	NM_004720.4	NM_004720.4		9170	44955913	NM_004720.4	EDG4	NP_004711.2	ILMN_1662741	0001170605	S	1679	AGCAGCAGAGACTGAGGGGTGCAGAGTGTGAGCTGGGAAAGGTTTGTGGC	19	-	19595571-19595620	19p13.11a	Homo sapiens endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 4 (EDG4), mRNA.				LPAR2; EDG-4; LPA2	LPAR2; EDG-4; LPA2
Homo sapiens	RefSeq	NM_001014336.1	ILMN_27923	IL31	NM_001014336.1	NM_001014336.1		386653	62122910	NM_001014336.1	IL31	NP_001014358.1	ILMN_2201866	0004040201	S	624	TCCAATGAATAATCTCAGGGACCCCTCATATGGGCTAGTCCCGGGAGGGC	12	-	122656807-122656856	12q24.31c	Homo sapiens interleukin 31 (IL31), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	IL-31	IL-31
Homo sapiens	RefSeq	NM_016428.2	ILMN_15857	ABI3	NM_016428.2	NM_016428.2		51225	29337288	NM_016428.2	ABI3	NP_057512.1	ILMN_1755658	0003840717	S	1894	TGTCCTGTGACTGCCCCACAGAGATAAGGGGCCAGGAGGGATTGAAAGGC	17	+	44655371-44655420	17q21.32c	Homo sapiens ABI family, member 3 (ABI3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 17101133] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11956071] [evidence NAS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 17101133] [evidence IDA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 11956071] [evidence NAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [pmid 17101133] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [pmid 11956071] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11501947] [evidence NAS]	SSH3BP3; NESH	SSH3BP3; NESH
Homo sapiens	RefSeq	NM_001839.2	ILMN_15358	CNN3	NM_001839.2	NM_001839.2		1266	47080096	NM_001839.2	CNN3	NP_001830.1	ILMN_1782439	0004640743	S	1856	GTGGCCTGTGGACATTTAGGCCTGGGTGATGCATTTGCTCTTCCTGTTTG	1	-	95135221-95135270	1p21.3d	Homo sapiens calponin 3, acidic (CNN3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence NAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence NAS]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence NAS]; Interacting selectively with troponin C, the calcium-binding subunit of the troponin complex [goid 30172] [evidence NAS]		
Homo sapiens	RefSeq	XM_378874.3	ILMN_35180	FLJ27354	XM_378874.3	XM_378874.3		400761	88942885	XM_378874.3	FLJ27354	XP_378874.3	ILMN_1720004	0005870196	A	997	GCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGA	1	-	89870167-89870216		PREDICTED: Homo sapiens hypothetical gene supported by AK130864 (FLJ27354), mRNA.					
Homo sapiens	RefSeq	XM_001714312.1	ILMN_339730	LOC728064	XM_001714312.1	XM_001714312.1		728064	169194743	XM_001714312.1	LOC728064	XP_001714364.1	ILMN_3204917	0002100468	A	1593	GTCTAATTCTAGCTCTCTGGGGCCACTCTTGTGAGTTTCTAGGTTCCGAG				10q11.21a	PREDICTED: Homo sapiens similar to cubilin (intrinsic factor-cobalamin receptor) (LOC728064), mRNA.					
Homo sapiens	RefSeq	XM_001724497.1	ILMN_352514	LOC100127951	XM_001724497.1	XM_001724497.1		100127951	169210508	XM_001724497.1	LOC100127951	XP_001724549.1	ILMN_3273286	0002470630	M	113	ATGGGAAGTCTGGAGAAGGGAAGCTCATGCCTATCAGATGTTGGGAGAGG				16q22.3a	PREDICTED: Homo sapiens ISPF6484 (LOC100127951), mRNA.					
Homo sapiens	Unigene	Hs.342412	ILMN_86792	HS.342412	Hs.342412		Hs.342412		23273647	BC036310			ILMN_1863230	0006650739	S	776	GGGGACTAGGTTGCGTAGTGTAATGAGAGAAGCATGGGTTTTGAGACCGC	13	+	79389971-79390020		Homo sapiens cDNA clone IMAGE:4825993					
Homo sapiens	Unigene	Hs.60764	ILMN_73245	HS.60764	Hs.60764		Hs.60764		27844046	BX099365			ILMN_1916224	0006130553	S	322	CACTCTTCAAGTGGTAAGTCATCCCCAGACTACAGACACTAACATCTCCA	3	-	85663239-85663288		BX099365 Soares retina N2b4HR Homo sapiens cDNA clone IMAGp998M08882, mRNA sequence					
Homo sapiens	RefSeq	XM_936711.1	ILMN_46845	LOC647655	XM_936711.1	XM_936711.1		647655	89031894	XM_936711.1	LOC647655	XP_941804.1	ILMN_1801700	0006180139	S	955	CATCAGAGGATACATACTGGCGAGAAACCCTATGAGTGTAAGGAATGTGG					PREDICTED: Homo sapiens similar to zinc finger protein 12 (KOX 3) (LOC647655), mRNA.					
Homo sapiens	RefSeq	XM_499136.2	ILMN_32747	LOC652441	XM_499136.2	XM_499136.2		652441	89071478	XM_499136.2	LOC652441	XP_499136.2	ILMN_1701688	0004180288	S	3	GTCCAGGGAGGGTGTGAATGTCCTAGAGACTACCCCGGATAATTTGCGGA					PREDICTED: Homo sapiens similar to zinc finger protein 658 (LOC652441), mRNA.					
Homo sapiens	RefSeq	XM_936248.1	ILMN_37466	LOC642109	XM_936248.1	XM_936248.1		642109	88981579	XM_936248.1	LOC642109	XP_941341.1	ILMN_1664955	0004040553	S	127	CCCTGGGAGCTCCACACAAAGAAGGTTTGTGTCTGGAACGGAAGATCCTG					PREDICTED: Homo sapiens similar to FRG1 protein (FSHD region gene 1 protein) (LOC642109), mRNA.					
Homo sapiens	RefSeq	NM_198319.1	ILMN_19878	PRMT1	NM_198319.2	NM_198319.2		3276	150456456	NM_198319.2	PRMT1	NP_938075.2	ILMN_1659744	0001170288	I	196	TGGGCTGAGCTAGAGACGGGGTCAGAGAGACTGGAGAGATGGTAGGCGTG	19	+	50183455-50183492:50183493-50183504	19q13.33b	Homo sapiens protein arginine methyltransferase 1 (PRMT1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10749851] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9029147] [evidence TAS]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [pmid 9545638] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9029147] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8663146] [evidence IPI]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [pmid 9029147] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	IR1B4; ANM1; HRMT1L2; HCP1	IR1B4; ANM1; HRMT1L2; HCP1
Homo sapiens	RefSeq	NM_198319.1	ILMN_19878	PRMT1	NM_198319.2	NM_198319.2		3276	150456456	NM_198319.2	PRMT1	NP_938075.2	ILMN_1692473	0006400138	A	1176	CCCAACGCCAAGAACAACCGGGACCTGGACTTCACCATCGACCTGGACTT	19	+	50189966-50189983:50191419-50191450	19q13.33b	Homo sapiens protein arginine methyltransferase 1 (PRMT1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10749851] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9029147] [evidence TAS]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [pmid 9545638] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9029147] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8663146] [evidence IPI]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [pmid 9029147] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	IR1B4; ANM1; HRMT1L2; HCP1	IR1B4; ANM1; HRMT1L2; HCP1
Homo sapiens	RefSeq	NM_017904.1	ILMN_4344	TTC22	NM_017904.1	NM_017904.1		55001	8923572	NM_017904.1	TTC22	NP_060374.1	ILMN_2122760	0001050528	S	1797	ACTTAGGTGAGTTCTGCCTCCTGCTAGCTTCCCGCACTGGTCCCAGACCT	1	-	55023114-55023163	1p32.3b	Homo sapiens tetratricopeptide repeat domain 22 (TTC22), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ20619	FLJ20619
Homo sapiens	RefSeq	NM_001099684.1	ILMN_307575	FAM156B	NM_001099684.1	NM_001099684.1		727866	153791170	NM_001099684.1	FAM156B	NP_001093154.1	ILMN_3244110	0000240326	S	1350	CAGTAAGAGATCACATGTCTGTGTAGTGTGAATGCCTTGTCGCTGTCCTG	X	+	52937236-52937285	Xp11.22b	Homo sapiens family with sequence similarity 156, member B (FAM156B), mRNA.				FLJ38843; FLJ33130	FLJ38843; FLJ33130
Homo sapiens	RefSeq	XM_001725432.1	ILMN_338585	LOC100129602	XM_001725432.1	XM_001725432.1		100129602	169202010	XM_001725432.1	LOC100129602	XP_001725484.1	ILMN_3257145	0001660131	M	311	CTCCTGTAAAGCAGAGCACAGTCATGAGCTTTCCTTCCCACAAGGAGCAA	11	+	100363472-100363521	11q22.1c	PREDICTED: Homo sapiens similar to hCG40515 (LOC100129602), mRNA.					
Homo sapiens	RefSeq	NM_019010.1	ILMN_161882	KRT20	NM_019010.1	NM_019010.1		54474	27894336	NM_019010.1	KRT20	NP_061883.1	ILMN_2219867	0000160184	S	1381	CTCCCTGCAAGAAATCAGCCATAAGAAAGCACTATTAATACTCTGCAGTG	17	-	39032499-39032548	17q21.2a	Homo sapiens keratin 20 (KRT20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10973561] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 8359595] [evidence NAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 8359595] [evidence ND ]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 33554] [evidence IEA]; Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [pmid 12857878] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 8359595] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16608857] [evidence IPI]	K20; CK20; KRT21; CD20; MGC35423	K20; CK20; KRT21; CD20; MGC35423
Homo sapiens	RefSeq	NM_019010.1	ILMN_161882	KRT20	NM_019010.1	NM_019010.1		54474	27894336	NM_019010.1	KRT20	NP_061883.1	ILMN_1794729	0005290674	S	1232	CCAGGAAGATTAAGACAGTCGTGCAAGAAGTAGTGGATGGCAAGGTCGTG	17	-	39032648-39032697	17q21.2a	Homo sapiens keratin 20 (KRT20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10973561] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 8359595] [evidence NAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 8359595] [evidence ND ]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 33554] [evidence IEA]; Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [pmid 12857878] [evidence IMP]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 8359595] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16608857] [evidence IPI]	K20; CK20; KRT21; CD20; MGC35423	K20; CK20; KRT21; CD20; MGC35423
Homo sapiens	RefSeq	XM_945630.1	ILMN_45743	MGC57359	XM_945630.1	XM_945630.1		441272	89026198	XM_945630.1	MGC57359	XP_950723.1	ILMN_1801168	0005560475	I	132	AGCAGTCTGAGAGGCTGGGGAGGATGGAGAGTGGTTTGGGGTTTGGGGTC				7q22.1c	PREDICTED: Homo sapiens similar to Williams Beuren syndrome chromosome region 19, transcript variant 6 (MGC57359), mRNA.					
Homo sapiens	RefSeq	XM_929548.1	ILMN_164437	MGC51338	XM_001133521.1	XM_001133521.1		388358	113428964	XM_001133521.1	MGC51338	XP_001133521.1	ILMN_1667804	0005080671	I	2029	TTTTGAATAAAATATCTATGCATCCTTTTGTGAGCAAGGAGCATGATGGT					PREDICTED: Homo sapiens hypothetical gene supported by BC042812 (MGC51338), mRNA.					
Homo sapiens	Unigene	Hs.284464	ILMN_84751	HS.284464	Hs.284464		Hs.284464		19897683	BQ068637			ILMN_1827840	0005890358	S	700	ATTGACTGACCTGGTGCCTACCCAGTTTGCTGGTTTCCTGCCTATAAGGG	10	-	89499450-89499468:89499471-89499473:89499475-89499502		AGENCOURT_6795541 NIH_MGC_47 Homo sapiens cDNA clone IMAGE:5802062 5, mRNA sequence					
Homo sapiens	RefSeq	NM_022457.5	ILMN_1221	RFWD2	NM_022457.5	NM_022457.5		64326	50428922	NM_022457.5	RFWD2	NP_071902.2	ILMN_2408001	0007570066	A	2668	CCATGGACATTGCTGCTCTTGGTGGTGTTATCTAATTTTTGTGATAGGGA	1	-	175914023-175914072	1q25.1b-q25.2a	Homo sapiens ring finger and WD repeat domain 2 (RFWD2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP11-318C24.3; FLJ10416; COP1; RNF200	RP11-318C24.3; FLJ10416; COP1; RNF200
Homo sapiens	RefSeq	NM_022457.5	ILMN_1221	RFWD2	NM_022457.5	NM_022457.5		64326	50428922	NM_022457.5	RFWD2	NP_071902.2	ILMN_2294644	0002940243	I	1096	ACAGATCCAGAAGGAGCTAAGTGTTTTGGAAGAGGATATTAAGAGAGTGG	1	-	176105625-176105674	1q25.1b-q25.2a	Homo sapiens ring finger and WD repeat domain 2 (RFWD2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP11-318C24.3; FLJ10416; COP1; RNF200	RP11-318C24.3; FLJ10416; COP1; RNF200
Homo sapiens	RefSeq	NM_022457.5	ILMN_1221	RFWD2	NM_022457.5	NM_022457.5		64326	50428922	NM_022457.5	RFWD2	NP_071902.2	ILMN_1661002	0000130639	A	2605	CCCTCCTTTATGACCTTTGGGACATTGGGAATACCCAGCCAACTCTCCAC	1	-	175914086-175914135	1q25.1b-q25.2a	Homo sapiens ring finger and WD repeat domain 2 (RFWD2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP11-318C24.3; FLJ10416; COP1; RNF200	RP11-318C24.3; FLJ10416; COP1; RNF200
Homo sapiens	RefSeq	NM_014517.2	ILMN_25221	UBP1	NM_014517.3	NM_014517.3		7342	141802825	NM_014517.3	UBP1	NP_055332.2	ILMN_1784410	0005870600	S	3779	CCTTTGCTTTCGTGTGACCACATGTTTTCTGTACCAGTCACTGGGGAAAG	3	-	33405151-33405200	3p22.3c	Homo sapiens upstream binding protein 1 (LBP-1a) (UBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8114710] [evidence TAS]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8114710] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 8114710] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 8114710] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8114710] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8114710] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 8114710] [evidence TAS]	LBP-1B; LBP1A; LBP1B; LBP-1a; DKFZp686L1745	LBP-1B; LBP1A; LBP1B; LBP-1a; DKFZp686L1745
Homo sapiens	RefSeq	XM_930062.1	ILMN_33736	LOC653808	XM_930062.2	XM_930062.2		653808	113425961	XM_930062.2	LOC653808	XP_935155.1	ILMN_1670376	0006270332	S	1378	GGCTGTGGTTTGCCAGAAATAGGCAAGTCAGTTTTCGGGGGTGTAAGGAA	16	+	29700041-29700090	16p11.2d	PREDICTED: Homo sapiens similar to zymogen granule protein 16 (LOC653808), mRNA.					
Homo sapiens	RefSeq	NM_006306.2	ILMN_19149	SMC1A	NM_006306.2	NM_006306.2		8243	30581134	NM_006306.2	SMC1A	NP_006297.2	ILMN_1652006	0005820561	S	9390	TAATAGGAACTGAAGCGCCGGGAGCCATGAAGCTGCAGGACCCATGAGGC	X	-	53421122-53421171	Xp11.22a	Homo sapiens structural maintenance of chromosomes 1A (SMC1A), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 7757074] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11076961] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The core heterodimer of a cohesin complex; a structure required for sister chromatid cohesion in eukaryotes [goid 8280] [pmid 11076961] [evidence TAS]	A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [pmid 11877377] [evidence IDA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 11877377] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a mitotic cell cycle [goid 7052] [pmid 12199140] [evidence TAS]; The cell cycle process whereby the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission [goid 7064] [pmid 12199140] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [pmid 11877377] [evidence IEP]; A cascade of processes induced by the detection of DNA damage within a cell [goid 42770] [pmid 11877377] [evidence IDA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 11076961] [evidence IDA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 12199140] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16438930] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11877377] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16438930] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11590136] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11076961] [evidence IPI]	SMCB; KIAA0178; SMC1alpha; DXS423E; DKFZp686L19178; SMC1; SMC1L1; SB1.8; MGC138332; CDLS2	SMCB; KIAA0178; SMC1alpha; DXS423E; DKFZp686L19178; SMC1; SMC1L1; SB1.8; MGC138332; CDLS2
Homo sapiens	RefSeq	NM_001025457.1	ILMN_23408	LOC283392	NM_001025457.1	NM_001025457.1		283392	70887658	NM_001025457.1	LOC283392	NP_001020628.1	ILMN_2096031	0001500296	S	375	AAGGATGGCCGAGGTGGGAGAGACTAGAGTGAACCAGCAGGAGGAAGTCC	12	-	70952058-70952076:70952077-70952107	12q21.1a	Homo sapiens hypothetical protein LOC283392 (LOC283392), mRNA.					
Homo sapiens	RefSeq	NM_003408.1	ILMN_11805	ZFP37	NM_003408.1	NM_003408.1		7539	4507962	NM_003408.1	ZFP37	NP_003399.1	ILMN_1793578	0001510674	S	2692	ACTTCATGGTGGTTGCCATTGGGCAGAGGAGTATAGGACTGGGGTCTAGG	9	-	115804184-115804233	9q32b	Homo sapiens zinc finger protein 37 homolog (mouse) (ZFP37), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9585434] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9585434] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9585434] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ38524	FLJ38524
Homo sapiens	RefSeq	NM_033313.1	ILMN_22859	CDC14A	NM_033313.1	NM_033313.1		8556	15451932	NM_033313.1	CDC14A	NP_201570.1	ILMN_2324537	0002940553	A	1389	GAATATGCCGGCCAGGCTCTATTATAGGACCCCAGCAGCACTTCCTGGAA	1	+	100706186-100706235	1p21.2a	Homo sapiens CDC14 cell division cycle 14 homolog A (S. cerevisiae) (CDC14A), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9367992] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9367992] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16221885] [evidence IPI]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Cdc14A1; Cdc14A2; hCDC14; cdc14	Cdc14A1; Cdc14A2; hCDC14; cdc14
Homo sapiens	RefSeq	NM_144617.1	ILMN_18186	HSPB6	NM_144617.1	NM_144617.1		126393	21389432	NM_144617.1	HSPB6	NP_653218.1	ILMN_1721283	0002600154	S	1346	CCTTCAAGACCCAACTGAGCACCCGCTCTGATTCCCCACAGCCTTTCTCC	19	-	40937371-40937420	19q13.12a	Homo sapiens heat shock protein, alpha-crystallin-related, B6 (HSPB6), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16225851] [evidence IPI]	FLJ32389; Hsp20	FLJ32389; Hsp20
Homo sapiens	RefSeq	NM_014814.1	ILMN_7326	PSMD6	NM_014814.1	NM_014814.1		9861	7661913	NM_014814.1	PSMD6	NP_055629.1	ILMN_1779633	0000990184	S	533	GAAGGAGGAGACTGGGACAGGAGAAACCGCCTAAAAGTGTATCAGGGTCT	3	-	64004653-64004702	3p14.1d	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 (PSMD6), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 10723133] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [pmid 10723133] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 10723133] [evidence NAS]	KIAA0107; S10; SGA-113M; p44S10	KIAA0107; S10; SGA-113M; p44S10
Homo sapiens	RefSeq	NM_014814.1	ILMN_7326	PSMD6	NM_014814.1	NM_014814.1		9861	7661913	NM_014814.1	PSMD6	NP_055629.1	ILMN_2155998	0005810070	S	1001	GGTGTGGAATTCATTGATCAGGAACTGTCCAGGTTTATTGCTGCCGGGAG	3	-	63996601-63996631:63999115-63999133	3p14.1d	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 (PSMD6), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 10723133] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein using energy from the hydrolysis of ATP [goid 6510] [pmid 10723133] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 10723133] [evidence NAS]	KIAA0107; S10; SGA-113M; p44S10	KIAA0107; S10; SGA-113M; p44S10
Homo sapiens	RefSeq	NM_206836.1	ILMN_7539	PECI	NM_206836.1	NM_206836.1		10455	45643120	NM_206836.1	PECI	NP_996667.1	ILMN_1713833	0006860091	I	529	GAAGGTTGGTAATTGTGGCTACTTCATACAACAGAGTTGAGCATTCATTG	6	-	4075432-4075481	6p25.2a	Homo sapiens peroxisomal D3,D2-enoyl-CoA isomerase (PECI), transcript variant 2, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10419495] [evidence TAS]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [evidence IEA]	The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 10419495] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; Catalysis of the reaction: 3-cis-dodecenoyl-CoA = 2-trans-dodecenoyl-CoA [goid 4165] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	ACBD2; DRS1; KIAA0536; HCA88; dJ1013A10.3	DRS1; KIAA0536; HCA88; dJ1013A10.3; ACBD2
Homo sapiens	RefSeq	NM_052896.2	ILMN_4133	CSMD2	NM_052896.3	NM_052896.3		114784	92110052	NM_052896.3	CSMD2	NP_443128.2	ILMN_1775432	0002690437	S	13000	GTCTCTGTATATGAGGCTTCCCCCTGGGGTCCTGCATTATGGTACTTTCC	1	-	33981749-33981798	1p35.1a-p34.3f	Homo sapiens CUB and Sushi multiple domains 2 (CSMD2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	dJ947L8.1; dJ1007G16.2; dJ1007G16.1; KIAA1884	dJ1007G16.2; dJ947L8.1; dJ1007G16.1; KIAA1884
Homo sapiens	RefSeq	NM_015393.2	ILMN_28506	PARM1	NM_015393.2	NM_015393.2		25849	54400757	NM_015393.2	PARM1	NP_056208.2	ILMN_1656560	0001240037	S	4668	GCCCTTCATCTTGCTTGCAAGTGTGCATGGTTCAATCCCTCACATCCAGG	4	+	75974952-75975001	4q13.3e	Homo sapiens prostate androgen-regulated mucin-like protein 1 (PARM1), mRNA.					
Homo sapiens	RefSeq	NM_005382.1	ILMN_1804	NEFM	NM_005382.1	NM_005382.1		4741	4885512	NM_005382.1	NEFM	NP_005373.1	ILMN_2215989	0001660767	S	2886	GCATGCAAGCTCAGGGTGCTCCCTCCTCAGTCTTTGGGGGATTCAAATGC	8	+	24832159-24832208	8p21.2c	Homo sapiens neurofilament, medium polypeptide 150kDa (NEFM), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]; A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter [goid 5883] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter [goid 5883] [pmid 3608989] [evidence TAS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [pmid 14662745] [evidence TAS]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IEA]; Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained [goid 31133] [evidence IEA]; The formation of the bundles of intermediate filaments, known as tonofilaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs [goid 45110] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The directed movement of organelles or molecules along microtubules in nerve cell axons [goid 8088] [evidence IEA]; Any process that modulates the rate, direction or extent of axon growth such that the correct diameter is attained and maintained [goid 31133] [evidence IEA]; The formation of the bundles of intermediate filaments, known as tonofilaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs [goid 45110] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising neurofilaments and their associated proteins [goid 60052] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 3608989] [evidence TAS]	NF-M; NEF3; NFM	NF-M; NEF3; NFM
Homo sapiens	Unigene	Hs.104792	ILMN_74855	HS.104792	Hs.104792		Hs.104792		27879546	BX114061			ILMN_1851376	0000010600	S	250	GATACAGGGGTCCTGGGCAGGGAGGGAATAGTTGTCCTTCAGGGTAGTGG	15	-	56024037-56024086		BX114061 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998F051794, mRNA sequence					
Homo sapiens	RefSeq	NM_014861.1	ILMN_2353	ATP2C2	NM_014861.2	NM_014861.2		9914	118498342	NM_014861.2	ATP2C2	NP_055676.2	ILMN_1785413	0002510669	S	2959	ATCATCTCGATCTGGTTGTGACTGTGGCCCCTGCCGTGTCTCCTCGTCAG	16	+	83054868-83054917	16q24.1a	Homo sapiens ATPase, Ca++ transporting, type 2C, member 2 (ATP2C2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]	SPCA2; KIAA0703; DKFZp686H22230	ATP2C2; SPCA2; DKFZp686H22230
Homo sapiens	Unigene	Hs.322859	ILMN_86109	HS.322859	Hs.322859		Hs.322859		27847069	BX106644			ILMN_1898627	0005290368	S	398	TCACCCAAATCAGGAACAATACAAGGATGTTTGCTCTCACCACAACTCTT					BX106644 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone IMAGp998E19622, mRNA sequence					
Homo sapiens	RefSeq	XM_001715342.1	ILMN_352996	LOC100132733	XM_001715342.1	XM_001715342.1		100132733	169161056	XM_001715342.1	LOC100132733	XP_001715394.1	ILMN_3249491	0002640376	S	500	GCTCAGAATGATGGTTTCCAGCTTCATCCACGTCTCTACAAAGGACATGA	1	-	142069441-142069484:142069485-142069490	1q12p	PREDICTED: Homo sapiens hypothetical protein LOC100132733 (LOC100132733), mRNA.					
Homo sapiens	RefSeq	NM_001004461.1	ILMN_163589	OR10A6	NM_001004461.1	NM_001004461.1		390093	52218835	NM_001004461.1	OR10A6	NP_001004461.1	ILMN_1717125	0004490184	S	533	CTTGTGAAACCCCAGCAGTGTTAGAACTTGCATGTGCAGACACGTTTTTG	11	-	7949627-7949676	11p15.4b	Homo sapiens olfactory receptor, family 10, subfamily A, member 6 (OR10A6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-96	OR11-96
Homo sapiens	Unigene	Hs.151334	ILMN_79043	HS.151334	Hs.151334		Hs.151334		22513149	BU071960			ILMN_1880446	0002230551	S	100	AGAATGCAGAAATCTGAGGACTAGAGCCTGGAGATGGGGAGCTTCGAGCT	9	+	35762231-35762280		im52e03.y1 HR85 islet Homo sapiens cDNA clone IMAGE:6038860 5, mRNA sequence					
Homo sapiens	RefSeq	XM_930480.1	ILMN_33488	MGC12760	XM_930480.1	XM_930480.1		84809	88942472	XM_930480.1	MGC12760	XP_935573.1	ILMN_1780496	0007330408	I	1659	GCCGTCGGTCTTGTCCCGCAGGCACTGGCCAACATGGCGAAACCCCATCT	1	-	16829066-16829115	1p36.13e	PREDICTED: Homo sapiens hypothetical protein MGC12760, transcript variant 2 (MGC12760), mRNA.					
Homo sapiens	RefSeq	NM_001145.2	ILMN_307787	ANG	NM_001097577.1	NM_001097577.1		283	148277045	NM_001097577.1	ANG	NP_001091046.1	ILMN_1760727	0003930392	S	575	CCTGGTCAAGTGCTGGCTCTGCTGTCCTTGCCTTCCATTTCCCCTCTGCA	14	+	20232018-20232067	14q11.2b	Homo sapiens angiogenin, ribonuclease, RNase A family, 5 (ANG), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [pmid 15166501] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16490744] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3663649] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16461950] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15735021] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10649442] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISS]; A stable heterodimer of angiogenin and placental ribonuclease inhibitor; interaction between angiogenin and PRI prevents angiogenin binding to its receptor to stimulate angiogenesis [goid 32311] [pmid 3470787] [evidence IPI]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence ISS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 17125737] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 16567967] [evidence TAS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 2479414] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [pmid 12770725] [evidence NAS]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [pmid 11438326] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 15776477] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 16490744] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 15979542] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 10999833] [evidence IDA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [pmid 11984825] [evidence NAS]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 9707554] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 9122172] [evidence IDA]; The chemical reactions and pathways resulting in the formation of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 6651] [pmid 2457905] [evidence IDA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [pmid 10103013] [evidence NAS]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 2457905] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [pmid 15735021] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [pmid 10999833] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 17125737] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that initiates the activity of the inactive enzyme protein kinase B [goid 32148] [pmid 17125737] [evidence IMP]; Any process that initiates the activity of the inactive enzyme phospholipase A2 [goid 32431] [pmid 2646638] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 17125737] [evidence IDA]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 15166501] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation [goid 48662] [pmid 10103013] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [pmid 2646638] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10649442] [evidence IC ]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11782452] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 7679494] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [pmid 10103013] [evidence TAS]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [pmid 2730651] [evidence IDA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [pmid 2424496] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9122172] [evidence IDA]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 9245697] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 10103013] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [pmid 2457905] [evidence TAS]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [pmid 11782452] [evidence IDA]	RNASE5; MGC22466; RNASE4; MGC71966	RNASE5; RNASE4; MGC71966
Homo sapiens	RefSeq	NM_194430.1	ILMN_307787	ANG	NM_001097577.1	NM_001097577.1		283	148277045	NM_001097577.1	ANG	NP_001091046.1	ILMN_1696974	0003890484	I	108	TGTGTTGGAAGAGATGGTGATGGGCCTGGGCGTTTTGTTGTTGGTCTTCG	14	+	20231551-20231563:20231564-20231600	14q11.2b	Homo sapiens angiogenin, ribonuclease, RNase A family, 5 (ANG), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [pmid 15166501] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16490744] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3663649] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16461950] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15735021] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10649442] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISS]; A stable heterodimer of angiogenin and placental ribonuclease inhibitor; interaction between angiogenin and PRI prevents angiogenin binding to its receptor to stimulate angiogenesis [goid 32311] [pmid 3470787] [evidence IPI]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence ISS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 17125737] [evidence IMP]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 16567967] [evidence TAS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 2479414] [evidence IMP]; The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [pmid 12770725] [evidence NAS]; A developmental process, independent of morphogenetic (shape) change, that is required for an oocyte to attain its fully functional state. Oocyte maturation commences after reinitiation of meiosis commonly starting with germinal vesicle breakdown, and continues up to the second meiotic arrest prior to fertilization [goid 1556] [pmid 11438326] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 15776477] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 16490744] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 15979542] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 10999833] [evidence IDA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [pmid 11984825] [evidence NAS]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 9707554] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 9122172] [evidence IDA]; The chemical reactions and pathways resulting in the formation of diacylglycerol, a glycerol molecule substituted on the 1 and 2 hydroxyl groups with long chain fatty acyl residues [goid 6651] [pmid 2457905] [evidence IDA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [pmid 10103013] [evidence NAS]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 2457905] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [pmid 15735021] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [pmid 10999833] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 17125737] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that initiates the activity of the inactive enzyme protein kinase B [goid 32148] [pmid 17125737] [evidence IMP]; Any process that initiates the activity of the inactive enzyme phospholipase A2 [goid 32431] [pmid 2646638] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule [goid 42327] [pmid 17125737] [evidence IDA]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 15166501] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of smooth muscle cell proliferation [goid 48662] [pmid 10103013] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50714] [pmid 2646638] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10649442] [evidence IC ]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 11782452] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 7679494] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [pmid 10103013] [evidence TAS]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [pmid 2730651] [evidence IDA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [pmid 2424496] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9122172] [evidence IDA]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 9245697] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 10103013] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [pmid 2457905] [evidence TAS]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [pmid 11782452] [evidence IDA]	RNASE5; MGC22466; RNASE4; MGC71966	RNS4; MGC9306
Homo sapiens	RefSeq	NM_004565.1	ILMN_21034	PEX14	NM_004565.2	NM_004565.2		5195	112789551	NM_004565.2	PEX14	NP_004556.1	ILMN_1763634	0001170482	S	1664	TCATGCCCCGTCGTCCTCCCAGACAAATGAAACCACGCTGCGCTTCCGAT	1	+	10612950-10612999	1p36.22c	Homo sapiens peroxisomal biogenesis factor 14 (PEX14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11863372] [evidence NAS]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 16449325] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [pmid 16449325] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 15146459] [evidence IMP]; Any process that stops, prevents or reduces the DNA-dependent transcription of a specific gene or genes [goid 32582] [pmid 11863372] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 11863372] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 12488033] [evidence IDA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 11863372] [evidence IDA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11863372] [evidence IPI]	dJ734G22.2; NAPP2; MGC12767; Pex14p	dJ734G22.2; NAPP2
Homo sapiens	RefSeq	XM_938957.1	ILMN_166237	TRIM16	XM_001129610.1	XM_001129610.1		10626	113427283	XM_001129610.1	TRIM16	XP_001129610.1	ILMN_1680487	0003180709	I	945	ACCTCCCTATGGCCCCGCTGCTGCCGACTGCTTCAACACATTCTTCTGTC				17p12a	PREDICTED: Homo sapiens tripartite motif-containing 16 (TRIM16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9817599] [evidence TAS]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_152307.1	ILMN_11479	TRMT61A	NM_152307.2	NM_152307.2		115708	123173771	NM_152307.2	TRMT61A	NP_689520.2	ILMN_1675577	0004150484	S	2006	TCTGACAGCCTCAAGGAAGGAGCAGTGCCTGTGTCAGCCATGGGGCCCTT	14	+	103071928-103071977	14q32.33a	Homo sapiens tRNA methyltransferase 61 homolog A (S. cerevisiae) (TRMT61A), mRNA.				TRM61; FLJ40452; GCD14; Gcd14p	FLJ40452
Homo sapiens	Unigene	Hs.546008	ILMN_109077	HS.546008	Hs.546008		Hs.546008		11086883	BF197622			ILMN_1881478	0003940273	S	58	CCAATATGCTCCCTCATGACACATCCACACATTGGTCACAGTGCCATCAG	X	-	120014723-120014772		7o85f05.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:3643160 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001001674.1	ILMN_24678	OR4F15	NM_001001674.1	NM_001001674.1		390649	53828671	NM_001001674.1	OR4F15	NP_001001674.1	ILMN_1799942	0006250148	S	699	AGCCAAGGCCCTCTCTACCCTGTCAGCTCATGTCACTGTGGTCATCTTGT	15	+	100176611-100176660	15q26.3d	Homo sapiens olfactory receptor, family 4, subfamily F, member 15 (OR4F15), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	XR_000992.1	ILMN_181219	LOC400759	NR_003133.1	NR_003133.1		400759	112734778	NR_003133.1	LOC400759		ILMN_1782487	0000620403	S	15900	CAACCAAGGACATGTACCATAAACTAAAGACCAGAGCCTTCCTGTCACCC					Homo sapiens similar to Interferon-induced guanylate-binding protein 1 (GTP-binding protein 1) (Guanine nucleotide-binding protein 1) (HuGBP-1) (LOC400759) on chromosome 1.					
Homo sapiens	RefSeq	NM_145213.1	ILMN_41578	MRPL30	NM_145212.2	NM_145212.2		51263	89191851	NM_145212.2	MRPL30	NP_660213.1	ILMN_1766154	0007210072	A	303	GGCCTCACCTGAAGATCATGAAAAATACGGTGGGGATCCACAGAACCCTC	2	+	99177654-99177703	2q11.2c	Homo sapiens mitochondrial ribosomal protein L30 (MRPL30), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC3314; MGC24095; FLJ44438; RPML28; MRP-L28	RPML28; MGC3314; MGC24095; FLJ44438; MRP-L28
Homo sapiens	RefSeq	NM_145212.1	ILMN_41578	MRPL30	NM_145212.2	NM_145212.2		51263	89191851	NM_145212.2	MRPL30	NP_660213.1	ILMN_1661039	0000450288	I	1681	CTGGGGAACAGAGATTCAGCCAAAGTCAAGAAACACTGGATGCCAGCTAG	2	+	99179633-99179682	2q11.2c	Homo sapiens mitochondrial ribosomal protein L30 (MRPL30), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC3314; MGC24095; FLJ44438; RPML28; MRP-L28	RPML28; MGC3314; MGC24095; FLJ44438; MRP-L28
Homo sapiens	RefSeq	NM_024332.2	ILMN_18443	BRCC3	NM_024332.2	NM_024332.2		79184	64762482	NM_024332.2	BRCC3	NP_077308.1	ILMN_1697546	0004230259	A	2325	GACCCAGCAGTTGTGCTCCTGGACATTCATTCCAGAGAAATGAAAACCTA	X	+	154003954-154004003	Xq28h	Homo sapiens BRCA1/BRCA2-containing complex, subunit 3 (BRCC3), transcript variant 1, mRNA.	A ubiquitin ligase complex found in the nucleus [goid 152] [pmid 14636569] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 14636569] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [pmid 14636569] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14636569] [evidence IPI]; Modulates the activity of an enzyme [goid 30234] [pmid 14636569] [evidence IDA]	C6.1A; RP11-143H17.2; BRCC36; CXorf53; BRCC3	C6.1A; RP11-143H17.2; BRCC36; CXorf53; BRCC3
Homo sapiens	Unigene	Hs.374832	ILMN_88423	HS.374832	Hs.374832		Hs.374832		78300341	DA086964			ILMN_1877778	0004180136	S	199	GAATCAAGGAGGTCAAGTAAGGTCACAGGGGCACTTGGGTTGAGCCAGGG	9	-	87347928-87347977		DA086964 BRACE2 Homo sapiens cDNA clone BRACE2041741 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001028.2	ILMN_1815	RPS25	NM_001028.2	NM_001028.2		6230	14591916	NM_001028.2	RPS25	NP_001019.1	ILMN_1746516	0003800332	S	33	CGGTGTCTGCTGCTATTCTCCGAGCTTCGCAATGCCGCCTAAGGACGACA	11	-	118888747-118888763:118888992-118888994:118888995-118889024	11q23.3e	Homo sapiens ribosomal protein S25 (RPS25), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10050887] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 1748303] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 8020948] [evidence NAS]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 8706699] [evidence IDA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10050887] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]		
Homo sapiens	RefSeq	NM_017803.3	ILMN_16935	DUS2L	NM_017803.3	NM_017803.3		54920	34147639	NM_017803.3	DUS2L	NP_060273.1	ILMN_1811650	0001510630	S	1869	GGTGGTAACTCCCCAACCTGACATTGGTACTGTGCAATAAAGACACCCCC	16	+	66670628-66670677	16q22.1c	Homo sapiens dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae) (DUS2L), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	SMM1; FLJ20399; URLC8; DUS2	SMM1; FLJ20399; URLC8; DUS2
Homo sapiens	RefSeq	XM_001718966.1	ILMN_350176	LOC729530	XM_001718966.1	XM_001718966.1		729530	169208971	XM_001718966.1	LOC729530	XP_001719018.1	ILMN_3305365	0000730504	M	3423	TTTCCCCAGAGGGTAATTTTAGTTGGAGGAGGGTGGTGGGATGATGTCAT				15q21.3c	PREDICTED: Homo sapiens similar to CCR4-NOT transcription complex, subunit 6-like (LOC729530), mRNA.					
Homo sapiens	RefSeq	NM_005866.2	ILMN_3662	SIGMAR1	NM_005866.2	NM_005866.2		10280	22212932	NM_005866.2	SIGMAR1	NP_005857.1	ILMN_3306742	0000050553	M	1125	GATGGGGGAGGGTATTATACTGCCTCAGTCTGACTCCTCAACCCAGCAGC	9	-	34635200-34635249	9p13.3c	Homo sapiens sigma non-opioid intracellular receptor 1 (SIGMAR1), transcript variant 1, mRNA.				SIGMAR1; MGC3851; FLJ25585; SR-BP1	SIGMAR1; MGC3851; FLJ25585; SR-BP1
Homo sapiens	RefSeq	NM_005866.2	ILMN_3662	SIGMAR1	NM_005866.2	NM_005866.2		10280	22212932	NM_005866.2	SIGMAR1	NP_005857.1	ILMN_2398489	0002940528	A	1410	CCCCATTCTTCCTTTGGGGGTATGATGTGGAAGCTGGTTTCAGCCCAGGA	9	-	34634915-34634964	9p13.3c	Homo sapiens sigma non-opioid intracellular receptor 1 (SIGMAR1), transcript variant 1, mRNA.				SIGMAR1; MGC3851; FLJ25585; SR-BP1	SIGMAR1; MGC3851; FLJ25585; SR-BP1
Homo sapiens	Unigene	Hs.540342	ILMN_105094	HS.540342	Hs.540342		Hs.540342		7280403	AW593145			ILMN_1868410	0004830292	S	68	GTGGCTGTAATAACGAAGCCAGGGCTCACACATATCAAGGGCCCCACCAG	15	-	35946531-35946580		hg09g01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2945136 3, mRNA sequence					
Homo sapiens	RefSeq	XM_927506.1	ILMN_34277	LOC644341	XM_927506.1	XM_927506.1		644341	89059713	XM_927506.1	LOC644341	XP_932599.1	ILMN_1787140	0007400632	S	89	ACATCACCTCTCCATCAAGGGTTCAGACCAAGGCTGAGGCTGAGATGGCC	X	-	51848043-51848092		PREDICTED: Homo sapiens hypothetical protein LOC644341 (LOC644341), mRNA.					
Homo sapiens	RefSeq	NM_001359.1	ILMN_11646	DECR1	NM_001359.1	NM_001359.1		1666	4503300	NM_001359.1	DECR1	NP_001350.1	ILMN_1720838	0000510291	S	1064	CAGGGGAATTCAACGACCTGAGAAAGGTCACCAAGGAGCAGTGGGACACC	8	+	91063942-91063967:91064066-91064089	8q21.3d	Homo sapiens 2,4-dienoyl CoA reductase 1, mitochondrial (DECR1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7818482] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: trans-2,3-didehydroacyl-CoA + NADP+ = trans,trans-2,3,4,5-tetradehydroacyl-CoA + NADPH + H+ [goid 8670] [pmid 7818482] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	NADPH; DECR	NADPH; DECR
Homo sapiens	RefSeq	NM_004911.3	ILMN_4575	PDIA4	NM_004911.3	NM_004911.3		9601	33469983	NM_004911.3	PDIA4	NP_004902.1	ILMN_1815261	0004060068	S	2604	TCTGATTGCTTCCTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCC	7	-	148331345-148331394	7q36.1a	Homo sapiens protein disulfide isomerase family A, member 4 (PDIA4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 2295602] [evidence TAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The regulated release of proteins from a cell or group of cells [goid 9306] [pmid 2295602] [evidence TAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	ERP72; ERP70	ERP72; ERP70
Homo sapiens	RefSeq	XM_001713689.1	ILMN_335538	LOC100134363	XM_001713689.1	XM_001713689.1		100134363	169163830	XM_001713689.1	LOC100134363	XP_001713741.1	ILMN_3236122	0005700356	S	2818	AAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCAGCAGACCTGAATT					PREDICTED: Homo sapiens hypothetical protein LOC100134363 (LOC100134363), mRNA.					
Homo sapiens	RefSeq	NM_178500.2	ILMN_177648	PHOSPHO1	NM_178500.2	NM_178500.2		162466	31341911	NM_178500.2	PHOSPHO1	NP_848595.1	ILMN_1688240	0000830132	S	1750	GACCCCCGCACTCCCTTCTAGCACCCCCAAAGGAAAAGCCAGAGGAACAA	17	-	44655977-44656026	17q21.32c	Homo sapiens phosphatase, orphan 1 (PHOSPHO1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reactions: O-phosphoethanolamine + H2O = ethanolamine + phosphate and phosphocholine + H2O = choline + phosphate [goid 33884] [evidence IEA]		
Homo sapiens	RefSeq	NM_001004488.1	ILMN_184009	OR2A25	NM_001004488.1	NM_001004488.1		392138	52317187	NM_001004488.1	OR2A25	NP_001004488.1	ILMN_1743654	0000060626	S	659	TTCTATGTGCCATTCTAAAGATCCAGTCAGGAGAGGGGTGCCAGAAAGCC	7	+	143402904-143402953	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 25 (OR2A25), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2A25P; OR2A27; OR2A24P	OR2A25P; OR2A27; OR2A24P
Homo sapiens	RefSeq	XM_001714109.1	ILMN_344102	LOC100129954	XM_001714109.1	XM_001714109.1		100129954	169172465	XM_001714109.1	LOC100129954	XP_001714161.1	ILMN_3263533	0002120382	M	1783	GAAACATGGGGAAACCACACCCTCTCTGCTCCAGTCACCAGCAGCCACTC				8q11.21a	PREDICTED: Homo sapiens hypothetical protein LOC100129954 (LOC100129954), mRNA.					
Homo sapiens	RefSeq	NM_174976.1	ILMN_183003	ZDHHC22	NM_174976.2	NM_174976.2		283576	145046233	NM_174976.2	ZDHHC22	NP_777636.2	ILMN_1654606	0005490161	S	3286	CAGACTGGTCAATGGGGGATGACGGTGGGGAGGTTGCCAGATGTGAGACT	14	-	77597685-77597734	14q24.3c	Homo sapiens zinc finger, DHHC-type containing 22 (ZDHHC22), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C14orf59	C14orf59
Homo sapiens	RefSeq	NM_173797.2	ILMN_2190	PAPD4	NM_173797.2	NM_173797.2		167153	31341107	NM_173797.2	PAPD4	NP_776158.1	ILMN_1681845	0000010050	S	2271	GCCTTAAGTCTTTGCTTGACTCACTGGGATAGACTGAGGCTTTGGGTGTG	5	+	79017369-79017418	5q14.1d	Homo sapiens PAP associated domain containing 4 (PAPD4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex required for RNAi mediated heterochromatin assembly. In S. pombe this contains RNA-directed RNA polymerase, a putative helicase and a protein containing a pap25 associated domain [goid 31380] [pmid 15070731] [evidence IC ]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The enzymatic addition of a sequence of adenylyl residues at the 3' end of an RNA molecule [goid 43631] [pmid 15070731] [evidence IDA]	Catalysis of the template-independent extension of the 3'- end of an RNA or DNA strand by addition of one adenosine molecule at a time. Cannot initiate a chain 'de novo'. The primer, depending on the source of the enzyme, may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group [goid 4652] [pmid 15070731] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ38499	FLJ38499
Homo sapiens	RefSeq	NM_174941.3	ILMN_137163	M160	NM_174941.3	NM_174941.3		283316	50659090	NM_174941.3	M160	NP_777601.2	ILMN_1802780	0000240220	S	4331	GATGCTAGCGACACATCGCTGTTGGGAGTTCTTCCTGCCTCTGAAGCCAC	12	-	7401273-7401322	12p13.31c	Homo sapiens scavenger receptor cysteine-rich type 1 protein M160 (M160), mRNA.				CD163B	CD163B
Homo sapiens	RefSeq	XM_001721014.1	ILMN_341993	LOC100132503	XM_001721014.1	XM_001721014.1		100132503	169175158	XM_001721014.1	LOC100132503	XP_001721066.1	ILMN_3241237	0004890612	S	1022	CGCTGCAGCCAACTTTGCCATTAAAACTCTTTGCCAAAGTTTGCACCTGT	9	+	1071-1120		PREDICTED: Homo sapiens similar to ring finger protein 208 (LOC100132503), mRNA.					
Homo sapiens	RefSeq	XM_001714377.1	ILMN_351486	LOC100128822	XM_001714377.1	XM_001714377.1		100128822	169171604	XM_001714377.1	LOC100128822	XP_001714429.1	ILMN_3195658	0001340451	A	337	CGCTGGGAGCGGGGCCCGCGGAAGGGGCCTCGGGACACCTGCCTCCGCCG				7q36.1e	PREDICTED: Homo sapiens hypothetical protein LOC100128822 (LOC100128822), mRNA.					
Homo sapiens	RefSeq	XM_001714377.1	ILMN_351486	LOC100128822	XM_001714377.1	XM_001714377.1		100128822	169171604	XM_001714377.1	LOC100128822	XP_001714429.1	ILMN_3272129	0001690639	M	93	GCGGGAAGGTTGTAGGGGGCCCCAGGGCAGGTCCTGGAGCTCAGGCAGCC				7q36.1e	PREDICTED: Homo sapiens hypothetical protein LOC100128822 (LOC100128822), mRNA.					
Homo sapiens	RefSeq	NM_024015.3	ILMN_138565	HOXB4	NM_024015.3	NM_024015.3		3214	45580720	NM_024015.3	HOXB4	NP_076920.1	ILMN_1654331	0002120008	S	1642	ATGCTTGGCAGGGTGAGGGGCCAGTTGAGTTCTGGGAGCTGGGCACTACT	17	-	44008209-44008258	17q21.32c	Homo sapiens homeo box B4 (HOXB4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX-2.6; HOX2; HOX2F	HOX2; HOX-2.6; HOX2F
Homo sapiens	RefSeq	XM_001715797.1	ILMN_347707	LOC650354	XM_001715797.1	XM_001715797.1		650354	169167315	XM_001715797.1	LOC650354	XP_001715849.1	ILMN_3245784	0001780154	S	323	AGAGACCCAATGTCAACAAGATCCCCTTGTCCAACTACATCAAGTTCAGG					PREDICTED: Homo sapiens hypothetical LOC650354 (LOC650354), mRNA.					
Homo sapiens	RefSeq	NM_017600.1	ILMN_19123	GOLGA2L1	NM_017600.1	NM_017600.1		55592	13487903	NM_017600.1	GOLGA2L1	NP_060070.1	ILMN_1726505	0004120452	S	1861	GCCTTGCCAGCAGTGGGGAGTCTGCACAAGGAGAGGCGGGGAAGCATTCT	12	-	100550545-100550594	12q23.1d	Homo sapiens golgi autoantigen, golgin subfamily a, 2-like 1 (GOLGA2L1), transcript variant 1, mRNA.				DKFZp434M0331	DKFZp434M0331
Homo sapiens	RefSeq	XM_927125.1	ILMN_171761	LOC728519	XM_001127632.1	XM_001127632.1		728519	113416624	XM_001127632.1	LOC728519	XP_001127632.1	ILMN_1679620	0006280470	S	3953	TGAGGTCCCTGAGTAATCCACCCCAGCTAAAGGCAAACCCTTCAATCAGG	5	-	69425968-69426017	5q13.2a	PREDICTED: Homo sapiens similar to Baculoviral IAP repeat-containing protein 1 (Neuronal apoptosis inhibitory protein) (LOC728519), mRNA.					
Homo sapiens	RefSeq	NM_052963.1	ILMN_168213	TOP1MT	XM_001130368.1	XM_001130368.1		116447	113420577	XM_001130368.1	TOP1MT	XP_001130368.1	ILMN_1796508	0007610671	A	712	AAGGAGGTGCGCTCCGATAACACCGTCACGTGGCTGGCAGCTTGGACCGA				8q24.3f	PREDICTED: Homo sapiens topoisomerase (DNA) I, mitochondrial (TOP1MT), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process by which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number [goid 6265] [evidence IEA]; The process by which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication [goid 6268] [evidence IEA]	Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle [goid 3917] [evidence IEA]; Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2 [goid 3918] [evidence IEA]		2900052H09Rik
Homo sapiens	RefSeq	NM_018381.1	ILMN_20169	C19ORF66	NM_018381.2	NM_018381.2		55337	154350197	NM_018381.2	C19orf66	NP_060851.2	ILMN_1750400	0005220204	S	2028	GAGAAGGAATCTGGACTCCCCATCCCCCCACCAGGATAAAAGTCCTGACC	19	+	10064832-10064881	19p13.2c	Homo sapiens chromosome 19 open reading frame 66 (C19orf66), mRNA.				FLJ40743	FLJ40743
Homo sapiens	RefSeq	NM_001003807.1	ILMN_21454	FLJ35429	NM_001003807.1	NM_001003807.1		285830	51339033	NM_001003807.1	FLJ35429	NP_001003807.1	ILMN_1726856	0007570564	S	1619	ACCCAAAAAGGCCCATGCAAGGTGGAGGGTGTGAAATGATGCCCCAGTAG	6	-	29811950-29811999	6p22.1a	Homo sapiens hypothetical protein FLJ35429 (FLJ35429), mRNA.					
Homo sapiens	RefSeq	NM_001872.2	ILMN_13767	CPB2	NM_001872.2	NM_001872.2		1361	16915931	NM_001872.2	CPB2	NP_001863.1	ILMN_1789003	0005820390	I	630	TGGGATAATAGGGCAATATACCAATCTCCTGAGGCTTGTGGATTTCTATG	13	-	45539489-45539538	13q14.12b	Homo sapiens carboxypeptidase B2 (plasma, carboxypeptidase U) (CPB2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1939207] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10651877] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10651877] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1939207] [evidence TAS]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 10651877] [evidence TAS]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 1939207] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CPU; PCPB; TAFI	CPU; PCPB; TAFI
Homo sapiens	Unigene	Hs.25555	ILMN_71975	HS.25555	Hs.25555		Hs.25555		23301169	BU633914			ILMN_1892511	0005270592	S	733	AGGACATGACCAGTGATGGGGGACTTTGAGGACTGGCTGCACGTTTCTCC					UI-H-FL1-bgw-i-15-0-UI.s1 NCI_CGAP_FL1 Homo sapiens cDNA clone UI-H-FL1-bgw-i-15-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000960.3	ILMN_25333	PTGIR	NM_000960.3	NM_000960.3		5739	39995095	NM_000960.3	PTGIR	NP_000951.1	ILMN_1747023	0001990008	S	1739	AAACCACAGTTATTGGAAAAGCTCCCTGCCTTCCCTTGCCGCTGGTCCCC	19	-	51815862-51815911	19q13.32b	Homo sapiens prostaglandin I2 (prostacyclin) receptor (IP) (PTGIR), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7512962] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 7512962] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7512962] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a thromboxane (TXA) to initiate a change in cell activity [goid 4960] [evidence IEA]	PRIPR; MGC102830; IP	PRIPR; MGC102830; IP
Homo sapiens	RefSeq	NM_024922.3	ILMN_172552	CES3	NM_024922.3	NM_024922.3		23491	38455414	NM_024922.3	CES3	NP_079198.2	ILMN_2165975	0001780470	S	3325	ATCGACCACCCAAGGGCTGAGGAGTGCGGGTGCACAGCGCGGGACTGGCA	16	+	65565989-65566038	16q22.1a	Homo sapiens carboxylesterase 3 (brain) (CES3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]		Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ES31; FLJ21736; Br3	ES31; FLJ21736; Br3
Homo sapiens	RefSeq	NM_001160325.1	ILMN_384034	OR6P1	NM_001160325.1	NM_001160325.1		128366	237858659	NM_001160325.1	OR6P1	NP_001153797.1	ILMN_3308088	0007570593	S	640	TGGTTTCATCATACACTGCCATCATTGCAGCCATCCTGAGGATCCCTACG				1q23.1f	Homo sapiens olfactory receptor, family 6, subfamily P, member 1 (OR6P1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	XM_926000.1	ILMN_37166	FAM7A3	XM_926000.1	XM_926000.1		89837	89038120	XM_926000.1	FAM7A3	XP_931093.1	ILMN_1780808	0001240717	A	628	CTGGTCCTGGAAAATACCAATATGGATAAAAGACCTTCAAAGCTGCTACG	15	+	28210789-28210838	15q13.2a	PREDICTED: Homo sapiens family with sequence similarity 7, member A3, transcript variant 1 (FAM7A3), mRNA.					
Homo sapiens	RefSeq	NM_001008938.1	ILMN_12487	CKAP5	NM_001008938.1	NM_001008938.1		9793	57164941	NM_001008938.1	CKAP5	NP_001008938.1	ILMN_1716336	0000670500	I	4802	CGATGAGGTCCTGAGACAGGAAGACAAAGCTGAAGCCATGTCCGGCCATA	11	-	46785064-46785113	11p11.2b	Homo sapiens cytoskeleton associated protein 5 (CKAP5), transcript variant 1, mRNA.	A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [pmid 14718566] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14718566] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [pmid 15703215] [evidence ISS]	Any cellular process that results in the specification, formation or maintenance of polarized microtubule-based cytoskeletal structures [goid 30951] [pmid 14718566] [evidence IMP]; The directed movement of RNA, ribonucleic acids, into, out of, within or between cells [goid 50658] [pmid 15703215] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51297] [pmid 14718566] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle pole body (SPB). The SPB is the microtubule organizing center in fungi, and is functionally homologous to the animal cell centrosome [goid 51300] [pmid 14718566] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15703215] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14603251] [evidence IPI]	KIAA0097; TOGp; FLJ35359; TOG; ch-TOG	KIAA0097; TOGp; FLJ35359; TOG; ch-TOG
Homo sapiens	RefSeq	NM_001008938.1	ILMN_12487	CKAP5	NM_001008938.1	NM_001008938.1		9793	57164941	NM_001008938.1	CKAP5	NP_001008938.1	ILMN_1748770	0000630333	A	6370	ACTCTGCTTCTCTCTGTCAGCGTCCTGCTGCTCTAGAAGACTGTCCGTGG	11	-	46775938-46775987	11p11.2b	Homo sapiens cytoskeleton associated protein 5 (CKAP5), transcript variant 1, mRNA.	A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [pmid 14718566] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14718566] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [pmid 15703215] [evidence ISS]	Any cellular process that results in the specification, formation or maintenance of polarized microtubule-based cytoskeletal structures [goid 30951] [pmid 14718566] [evidence IMP]; The directed movement of RNA, ribonucleic acids, into, out of, within or between cells [goid 50658] [pmid 15703215] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized [goid 51297] [pmid 14718566] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle pole body (SPB). The SPB is the microtubule organizing center in fungi, and is functionally homologous to the animal cell centrosome [goid 51300] [pmid 14718566] [evidence IMP]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15703215] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14603251] [evidence IPI]	KIAA0097; TOGp; FLJ35359; TOG; ch-TOG	KIAA0097; TOGp; FLJ35359; TOG; ch-TOG
Homo sapiens	RefSeq	XM_927066.1	ILMN_35454	LOC643784	XM_927066.1	XM_927066.1		643784	88983789	XM_927066.1	LOC643784	XP_932159.1	ILMN_1806774	0007000400	S	1258	TTTTTTACCCATCAAACTCTTTAGAAATGTTTAATTGCAAGAAGAAATTT	5	+	68957822-68957871	5q13.2a	PREDICTED: Homo sapiens similar to Baculoviral IAP repeat-containing protein 1 (Neuronal apoptosis inhibitory protein) (LOC643784), mRNA.					
Homo sapiens	RefSeq	NM_006352.3	ILMN_5356	ZNF238	NM_006352.3	NM_006352.3		10472	45439300	NM_006352.3	ZNF238	NP_006343.2	ILMN_1728765	0005270164	I	278	GATGCGTCGGAAGCTCTTTGGCGGGGGTGAGGAAGTTCAGAAAGTGTGCA	1	+	242283482-242283531	1q44a	Homo sapiens zinc finger protein 238 (ZNF238), transcript variant 2, mRNA.	A chromosome found in the nucleus of a eukaryotic cell [goid 228] [pmid 9756912] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9013868] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9756912] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9013868] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9756912] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9770450] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9013868] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP58; ZBTB18; TAZ-1; C2H2-171	RP58; ZBTB18; TAZ-1; C2H2-171
Homo sapiens	RefSeq	XM_945168.1	ILMN_169314	C10ORF93	XM_001126217.1	XM_001126217.1		255352	113422210	XM_001126217.1	C10orf93	XP_001126217.1	ILMN_1783629	0007380524	A	516	GAGGCAGCCAGAGGTGAGCGAGGACTGCATCCAAATGTACTTCAAGGTGA				10q26.3f	PREDICTED: Homo sapiens chromosome 10 open reading frame 93 (C10orf93), mRNA.					
Homo sapiens	RefSeq	NM_173572.1	ILMN_169314	C10ORF93	XM_001126217.1	XM_001126217.1		255352	113422210	XM_001126217.1	C10orf93	XP_001126217.1	ILMN_1724517	0004860608	A	891	TTATCTGCAAGCCGGAAGAAAGGAGGAGGCTGCCAGGTTCTGCTCCACGG				10q26.3f	PREDICTED: Homo sapiens chromosome 10 open reading frame 93 (C10orf93), mRNA.					bB137A17.3; RP13-137A17.3
Homo sapiens	RefSeq	NM_016454.2	ILMN_3400	TMEM85	NM_016454.2	NM_016454.2		51234	24475963	NM_016454.2	TMEM85	NP_057538.1	ILMN_1798874	0005220187	S	567	GCCTTCATTGAGCCCCCTGAGAGAATGGAGTTCAGTGGTGGAGGACTGCT	15	+	32308062-32308082:32309246-32309274	15q14a	Homo sapiens transmembrane protein 85 (TMEM85), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			PIG17; MGC24415; FLJ90746	PIG17; MGC24415; FLJ90746
Homo sapiens	RefSeq	NM_007246.2	ILMN_24870	KLHL2	NM_007246.2	NM_007246.2		11275	21359895	NM_007246.2	KLHL2	NP_009177.2	ILMN_1701837	0001070593	S	2704	CCACTTCTGAGGAATGGACCTGGTGTAACACACTTGAATATGTGTGATGC	4	+	166463343-166463392	4q32.3b	Homo sapiens kelch-like 2, Mayven (Drosophila) (KLHL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10397770] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 10397770] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10397770] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ABP-KELCH; MAV; MAYVEN	ABP-KELCH; MAV; MAYVEN
Homo sapiens	RefSeq	NM_173672.1	ILMN_23230	PPIL6	NM_173672.2	NM_173672.2		285755	142345120	NM_173672.2	PPIL6	NP_775943.1	ILMN_1657058	0003120259	S	756	AGAGGAGTACTTGGAATGGCCAACAAAGGCCGTCACAGCAACGGGTCACA	6	-	109827987-109828036	6q21f	Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 6 (PPIL6), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	bA425D10.6; MGC41939; dJ919F19.1	bA425D10.6; MGC41939; dJ919F19.1
Homo sapiens	RefSeq	NM_080866.2	ILMN_172906	SLC22A9	NM_080866.2	NM_080866.2		114571	42542385	NM_080866.2	SLC22A9	NP_543142.2	ILMN_2232339	0000770300	S	1937	CCAGGAGCTGACTGCCGATCAATGAGCCAGATGAAGGGAACAATCAGGAC	11	+	62933917-62933966	11q12.3b	Homo sapiens solute carrier family 22 (organic anion transporter), member 9 (SLC22A9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	ust3; HOAT4; OAT4; OAT7; UST3H; FLJ23666	ust3; HOAT4; OAT4; OAT7; UST3H; FLJ23666
Homo sapiens	RefSeq	XM_374836.2	ILMN_167425	LOC399815	XR_015659.1	XR_015659.1		399815	113422183	XR_015659.1	LOC399815		ILMN_1793686	0004490224	A	775	GCTGGATACAAGCAAATGACTGGACTACAATGCTCATCTGCCTTAGGAGC				10q26.13b	PREDICTED: Homo sapiens similar to chromosome 10 open reading frame 88; Em:AC073585.5 (LOC399815), misc RNA.					
Homo sapiens	RefSeq	NM_015997.2	ILMN_20031	C1ORF66	NM_015997.2	NM_015997.2		51093	21361524	NM_015997.2	C1orf66	NP_057081.2	ILMN_1706413	0007610202	S	1870	CCCACTGGTGGAGACGCTTATTCTACTGGACCGGCTGCTGTACCTTCAGG	1	+	154972270-154972319	1q23.1a	Homo sapiens chromosome 1 open reading frame 66 (C1orf66), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]; The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically [goid 154] [evidence IEA]	Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]; Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor [goid 179] [evidence IEA]; Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule [goid 8649] [evidence IEA]	CGI-41	CGI-41
Homo sapiens	RefSeq	NR_029482.1	ILMN_387949	MIRLET7E	NR_029482.1	NR_029482.1		406887	262205608	NR_029482.1	MIRLET7E		ILMN_3310281	0007040768	S	12	TAGGAGGTTGTATAGTTGAGGAGGACACCCAAGGAGATCACTATACGGCC				19q13.33e	Homo sapiens microRNA let-7e (MIRLET7E), microRNA.					
Homo sapiens	RefSeq	NM_182533.1	ILMN_2880	C1ORF86	NM_182533.1	NM_182533.1		199990	32698895	NM_182533.1	C1orf86	NP_872339.1	ILMN_1726989	0007330653	S	2128	GAGAAGGGCCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGTTTT	1	-	2105815-2105864	1p36.33a	Homo sapiens chromosome 1 open reading frame 86 (C1orf86), mRNA.				RP11-181G12.3; MGC120153; FLJ31031	RP11-181G12.3; MGC120153; FLJ31031
Homo sapiens	RefSeq	XM_930949.1	ILMN_39126	LOC642608	XM_930949.1	XM_930949.1		642608	89056711	XM_930949.1	LOC642608	XP_936042.1	ILMN_1694382	0000240717	S	61	CTTGCTGTGGATGCAGCCATAGATCTTCCTGTTGGGTCCCGGGAAGCGTG	19	-	33918159-33918208		PREDICTED: Homo sapiens hypothetical protein LOC642608 (LOC642608), mRNA.					
Homo sapiens	RefSeq	NM_001018009.1	ILMN_8371	SH3BP5	NM_001018009.2	NM_001018009.2		9467	109134343	NM_001018009.2	SH3BP5	NP_001018009.2	ILMN_1683799	0006270092	I	100	TGGAGGAGATAGCGATGCAGACAGCAGAAGCCCTGAGGACAGAGCCAGCT	3	-	15382752-15382801	3p24.3e	Homo sapiens SH3-domain binding protein 5 (BTK-associated) (SH3BP5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9571151] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10339589] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [pmid 10339589] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9571151] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	SAB	SAB
Homo sapiens	RefSeq	NM_005968.3	ILMN_169352	HNRNPM	NM_005968.3	NM_005968.3		4670	157412271	NM_005968.3	HNRNPM	NP_005959.2	ILMN_3269405	0006510437	M	2114	CGTGCTGTACGCCGACATCAAGATGGAGAATGGGAAGTCCAAGGGGTGTG	19	+	8459579-8459628	19p13.2d	Homo sapiens heterogeneous nuclear ribonucleoprotein M (HNRNPM), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9731529] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8088785] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 9731529] [evidence IC ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9731529] [evidence NAS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]	HNRPM4; HNRNPM; DKFZp547H118; HTGR1; HNRNPM4; NAGR1	HNRPM4; HTGR1; HNRNPM4; HNRNPM; DKFZp547H118; NAGR1
Homo sapiens	RefSeq	NM_024657.2	ILMN_5233	MORC4	NM_024657.2	NM_024657.2		79710	21362027	NM_024657.2	MORC4	NP_078933.2	ILMN_1795463	0000840397	S	2801	GTGGTACAGATATGACATGGAAGATCTGGGGGAGGAAGTTCAAGGAAGGC	X	-	106070815-106070864	Xq22.3b	Homo sapiens MORC family CW-type zinc finger 4 (MORC4), mRNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	dJ75H8.2; ZCWCC2; ZCW4; FLJ11565	dJ75H8.2; FLJ11565; ZCWCC2; ZCW4
Homo sapiens	RefSeq	XM_931939.1	ILMN_31259	LOC643953	XM_931939.1	XM_931939.1		643953	88976549	XM_931939.1	LOC643953	XP_937032.1	ILMN_1659513	0001940215	S	1	ATGCAGCGCAGAGCCCAGGGCGGCTCTCGTCCTTACCGGCTGGTCCCGAG	4	-	87734952-87735001		PREDICTED: Homo sapiens hypothetical protein LOC643953 (LOC643953), mRNA.					
Homo sapiens	RefSeq	NM_145659.3	ILMN_18907	IL27	NM_145659.3	NM_145659.3		246778	62422574	NM_145659.3	IL27	NP_663634.2	ILMN_1753758	0006520523	S	778	CCCCCCACCCTTTAGAACTTTAGGACTGGAGTCTTGGCATCAGGGCAGCC	16	-	28510899-28510948	16p11.2e	Homo sapiens interleukin 27 (IL27), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISS]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process that modulates the frequency, rate or extent of T cell proliferation [goid 42129] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [pmid 12734330] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that modulates the frequency, rate or extent of T-helper 1 cell differentiation [goid 45625] [pmid 12734330] [evidence IDA]; Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism [goid 50688] [evidence IEA]	Interacting selectively with the interleukin-27 receptor [goid 45523] [evidence ISS]	MGC71873; IL27p28; IL-27; p28; IL30	MGC71873; IL-27; p28; IL30; IL27p28
Homo sapiens	RefSeq	XM_930254.1	ILMN_166674	LOC644422	XR_019449.1	XR_019449.1		644422	113427287	XR_019449.1	LOC644422		ILMN_1660757	0004860373	A	129	CCCGCCACGGACATGCCGCGCGTCTACATAGGACGCCTAAGCTACAACGT				17p11.2i	PREDICTED: Homo sapiens misc_RNA (LOC644422), miscRNA.					
Homo sapiens	RefSeq	XM_930254.1	ILMN_166674	LOC644422	XR_019449.1	XR_019449.1		644422	113427287	XR_019449.1	LOC644422		ILMN_1712347	0000380750	I	804	GTCGCTCCCGTTCCAGGTCGCGGAGCAAAGGTCGATCACGTTCTCGATCA				17p11.2i	PREDICTED: Homo sapiens misc_RNA (LOC644422), miscRNA.					
Homo sapiens	RefSeq	NR_001536.1	ILMN_7998	TTTY2	NR_001536.1	NR_001536.1		60439	32563538	NR_001536.1	TTTY2		ILMN_2048223	0004900379	S	3061	CCAGGGGCCCGAATCTACCTGGCAAATGTGCATGCTCTACTCTCAGTGCA	Y	+	10205978-10206027	Yp11.2b	Homo sapiens testis-specific transcript, Y-linked 2 (TTTY2) on chromosome Y.				TTY2	TTY2
Homo sapiens	RefSeq	NR_001536.1	ILMN_7998	TTTY2	NR_001536.1	NR_001536.1		60439	32563538	NR_001536.1	TTTY2		ILMN_2048228	0005690646	S	3000	TAGCATGCCATCTCTGTCTATATCATTTTCCTCTGCTTAGGCAGGCTGAC	Y	+	10205917-10205966	Yp11.2b	Homo sapiens testis-specific transcript, Y-linked 2 (TTTY2) on chromosome Y.				TTY2	TTY2
Homo sapiens	RefSeq	NM_021244.2	ILMN_5663	RRAGD	NM_021244.3	NM_021244.3		58528	142369198	NM_021244.3	RRAGD	NP_067067.1	ILMN_1699772	0006480209	S	1217	TGCAGAAGAAAAAGAGAGCCACCCCTAATGGGACCCCTAGAGTGCTGCTG	6	-	90134496-90134545	6q15c	Homo sapiens Ras-related GTP binding D (RRAGD), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11073942] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11073942] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14660641] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAGD; DKFZP761H171; bA11D8.2.1	RAGD; DKFZP761H171; bA11D8.2.1
Homo sapiens	RefSeq	NM_000534.3	ILMN_18417	PMS1	NM_000534.3	NM_000534.3		5378	53729349	NM_000534.3	PMS1	NP_000525.1	ILMN_1700847	0005960594	S	2838	CCTCGCAAAGTGATAAGTTATTTAGAGGGAGAAGCAGTGCGTCTATCCAG	2	+	190446601-190446627:190450243-190450265	2q32.2b	Homo sapiens PMS1 postmeiotic segregation increased 1 (S. cerevisiae) (PMS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8072530] [evidence TAS]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 8072530] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8072530] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	DKFZp781M0253; HNPCC3; PMSL1; hPMS1	DKFZp781M0253; HNPCC3; PMSL1; hPMS1
Homo sapiens	RefSeq	XM_934128.1	ILMN_14164	PLGLB1	NM_001032392.2	NM_001032392.2		5343	123702142	NM_001032392.2	PLGLB1	NP_001027564.1	ILMN_1751811	0006420347	I	2491	GCGTAACGTGTTCACCTCTCGGAAAGGAGCAAAACTTTGCTCAGATCCCA	2	-	87238057-87238106	2p11.2e	Homo sapiens plasminogen-like B1 (PLGLB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			PLGP1; PLGL; PRP-B	
Homo sapiens	RefSeq	NM_002665.3	ILMN_14164	PLGLB1	NM_001032392.2	NM_001032392.2		5343	123702142	NM_001032392.2	PLGLB1	NP_001027564.1	ILMN_1698587	0003310367	S	280	TGTGTGATAATGGCTGAAAACAGGAAGTCCTCCATAATCATTAGGATGAG	2	-	87243450-87243499	2p11.2e	Homo sapiens plasminogen-like B1 (PLGLB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			PLGP1; PLGL; PRP-B	PLGP1
Homo sapiens	RefSeq	NM_001032392.2	ILMN_14164	PLGLB1	NM_001032392.2	NM_001032392.2		5343	123702142	NM_001032392.2	PLGLB1	NP_001027564.1	ILMN_2094416	0006020706	S	424	GGCATCACCTGTCAAAAATGGAGTTCCACTTCTCCCCGCAAACCTAGGTC	2	-	87240124-87240173	2p11.2e	Homo sapiens plasminogen-like B1 (PLGLB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			PLGP1; PLGL; PRP-B	PLGP1; PLGL; PRP-B
Homo sapiens	RefSeq	XM_944816.1	ILMN_35980	LOC440927	XM_944816.1	XM_944816.1		440927	88957949	XM_944816.1	LOC440927	XP_949909.1	ILMN_1689712	0003190348	A	36	AAGCTAAGGCCGCGTTGGGGTAAGGCCCTCACTTCATCCTGCGACTAGCA					PREDICTED: Homo sapiens similar to 60S acidic ribosomal protein P1, transcript variant 4 (LOC440927), mRNA.					
Homo sapiens	RefSeq	XM_001719479.1	ILMN_350187	LOC100129686	XM_001719479.1	XM_001719479.1		100129686	169213759	XM_001719479.1	LOC100129686	XP_001719531.1	ILMN_3270528	0000360088	M	1594	CCCTTCAGTTTCCTTACAGGCTTTCGAGTGCACATGAGAATGCACACTGG				19p13.2a	PREDICTED: Homo sapiens hypothetical protein LOC100129686 (LOC100129686), mRNA.					
Homo sapiens	RefSeq	XM_001719479.1	ILMN_350187	LOC100129686	XM_001719479.1	XM_001719479.1		100129686	169213759	XM_001719479.1	LOC100129686	XP_001719531.1	ILMN_3194067	0004480184	A	1271	ACTACTCAGCTCAAAGACATGAAAGGACTCATACTGGAGAGAAACCCTAC				19p13.2a	PREDICTED: Homo sapiens hypothetical protein LOC100129686 (LOC100129686), mRNA.					
Homo sapiens	RefSeq	NM_001098845.1	ILMN_306700	ANXA8L1	NM_001098845.1	NM_001098845.1		728113	149588957	NM_001098845.1	ANXA8L1	NP_001092315.1	ILMN_3242004	0001580259	S	337	CTGAGACCTTGAAGTCTGAGCTCAGTGGCAAGTTTGAGAGGCTCATTGTG	10	-	47167126-47167175	10q11.22a	Homo sapiens annexin A8-like 1 (ANXA8L1), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	bA301J7.3	bA301J7.3
Homo sapiens	Unigene	Hs.571887	ILMN_124068	HS.571887	Hs.571887		Hs.571887		10437525	AK025082			ILMN_1823809	0004610184	S	2719	AGGCCCATTTCTGTACCTCTCCCCTCAGACTGTTAGCCACAGACCCTTAG	7	+	127453209-127453258		Homo sapiens cDNA: FLJ21429 fis, clone COL04205					
Homo sapiens	Unigene	Hs.434335	ILMN_91183	HS.434335	Hs.434335		Hs.434335		34192309	BC043263			ILMN_1882569	0002070471	S	2016	GTTGAAAAAAGCACCCTTGGTGAAGTGGAGCAGCAACTCGCTCAGAAGCC	18	-	51700138-51700187		Homo sapiens cDNA clone IMAGE:5296724					
Homo sapiens	RefSeq	NM_000126.1	ILMN_37255	ETFA	NM_000126.2	NM_000126.2		2108	89903004	NM_000126.2	ETFA	NP_000117.1	ILMN_1718924	0004780743	S	816	TGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGC	15	-	74353839-74353888	15q24.2a	Homo sapiens electron-transfer-flavoprotein, alpha polypeptide (glutaric aciduria II) (ETFA), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 3170610] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8617498] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8617498] [evidence TAS]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	GA2; MADD; EMA	GA2; MADD; EMA
Homo sapiens	RefSeq	NM_033118.2	ILMN_22950	MYLK2	NM_033118.2	NM_033118.2		85366	17136076	NM_033118.2	MYLK2	NP_149109.1	ILMN_2050183	0004290168	S	2571	CATGGCCTCAGATGATGGGGTCAGCAGGCCCAGGAGAATTAGGAAGGCCA	20	+	29886041-29886090	20q11.21b	Homo sapiens myosin light chain kinase 2, skeletal muscle (MYLK2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [pmid 16448786] [evidence IC ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IEA]; Any process that modulates the frequency, rate or extent of muscle filament sliding [goid 32971] [pmid 16448786] [evidence IDA]; The process by which the anatomical structures of cardiac muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 55008] [pmid 16448786] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [pmid 16448786] [evidence IC ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence ISS]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a light chain of a myosin complex [goid 32027] [pmid 16448786] [evidence IC ]	skMLCK; KMLC; MLCK	skMLCK; KMLC; MLCK
Homo sapiens	RefSeq	XM_944784.1	ILMN_35637	LOC651597	XM_944784.1	XM_944784.1		651597	88979691	XM_944784.1	LOC651597	XP_949877.1	ILMN_1734639	0006180156	S	818	CACCTGCCTGGGTCTCCCAAAGAGCTTGGATTATAGACATGACCCACTGT					PREDICTED: Homo sapiens hypothetical protein LOC651597 (LOC651597), mRNA.					
Homo sapiens	RefSeq	NM_001571.2	ILMN_20576	IRF3	NM_001571.2	NM_001571.2		3661	46403042	NM_001571.2	IRF3	NP_001562.1	ILMN_1765649	0000150397	S	1387	GTAGGGGGTGCCTCCTCCCTGGAGAATACTGTGGACCTGCACATTTCCAA	19	-	54854799-54854848	19q13.33b	Homo sapiens interferon regulatory factor 3 (IRF3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12692549] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12692549] [evidence EXP]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8524823] [evidence TAS]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 8524823] [evidence TAS]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 8524823] [evidence TAS]		
Homo sapiens	RefSeq	NM_021222.1	ILMN_27601	PRUNE	NM_021222.1	NM_021222.1		58497	24308262	NM_021222.1	PRUNE	NP_067045.1	ILMN_1728914	0006420521	S	2632	GGTTCATGGCGTGTTGACCCAGCAGAGCACTCCCTCCCACTAACTTGTTC	1	+	149274468-149274517	1q21.2d	Homo sapiens prune homolog (Drosophila) (PRUNE), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the reaction: diphosphate + H2O = 2 phosphate [goid 4427] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IEA]; Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments [goid 16462] [evidence IEA]	DRES-17; HTCD37	DRES-17; HTCD37
Homo sapiens	RefSeq	NM_014240.1	ILMN_3040	LIMD1	NM_014240.1	NM_014240.1		8994	7657306	NM_014240.1	LIMD1	NP_055055.1	ILMN_1764747	0001030088	S	2315	GACCTGAGGTTGCATCATAGCACCAAAGGAATCCTCCTGTCCCCTCTGGG	3	+	45693818-45693867	3p21.31j	Homo sapiens LIM domains containing 1 (LIMD1), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10647888] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10647888] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10647888] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10647888] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10647888] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_931141.1	ILMN_32177	CYLC1	XM_931141.1	XM_931141.1		1538	89059879	XM_931141.1	CYLC1	XP_936234.1	ILMN_1692703	0006450070	A	1	CAGGCAGGGGAAATGTCTCTTCCAAGGCTAAAAGTAAACATCAGAACATA	X	+	83002835-83002846:83002847-83002860:83011529-83011552	Xq21.1e	PREDICTED: Homo sapiens cylicin, basic protein of sperm head cytoskeleton 1, transcript variant 2 (CYLC1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence NAS]; A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction [goid 43159] [pmid 8354692] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8354692] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 8354692] [evidence NAS]		
Homo sapiens	RefSeq	XM_001718794.1	ILMN_352454	LOC100128943	XM_001718794.1	XM_001718794.1		100128943	169215886	XM_001718794.1	LOC100128943	XP_001718846.1	ILMN_3273247	0003990398	M	564	ACTGGCAGCCTAGACCGCGGCGACCGGAAAAGCAAGGCAGAGGCGGAAAA				22q13.31d	PREDICTED: Homo sapiens similar to hCG2038853 (LOC100128943), mRNA.					
Homo sapiens	RefSeq	XM_001719273.1	ILMN_348195	LOC100134236	XM_001719273.1	XM_001719273.1		100134236	169213716	XM_001719273.1	LOC100134236	XP_001719325.1	ILMN_3246163	0006860692	S	777	GGCTTCAGGGCCATCAGATGTGTTGCTGACACCCACTGCTGATCCCATGG					PREDICTED: Homo sapiens similar to Nuclear factor, interleukin 3 regulated (LOC100134236), mRNA.					
Homo sapiens	RefSeq	NM_173518.2	ILMN_22241	C8ORF45	NM_173518.2	NM_173518.2		157777	40255171	NM_173518.2	C8orf45	NP_775789.2	ILMN_2113738	0004640132	S	2164	GTCCGAGAGGGCAGATTGCCTGAGGTCAGGAGTTCAAGACCAGCCTGGGC	8	+	67976486-67976535	8q13.1b	Homo sapiens chromosome 8 open reading frame 45 (C8orf45), mRNA.				FLJ25692	FLJ25692
Homo sapiens	RefSeq	NM_016486.3	ILMN_22324	TMEM69	NM_016486.3	NM_016486.3		51249	118918408	NM_016486.3	TMEM69	NP_057570.2	ILMN_3251312	0003870551	S	1000	AGTGAGGAGCGCCTCTGCCTGGCCGCCTGACCATCTGGGAAGTGTGACAA	1	+	45932224-45932273	1p34.1b	Homo sapiens transmembrane protein 69 (TMEM69), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C1orf154; MGC104183; RP11-767N6.4; FLJ21029	C1orf154; RP11-767N6.4; FLJ21029
Homo sapiens	RefSeq	NM_018530.1	ILMN_171467	GSDMB	NM_001042471.1	NM_001042471.1		55876	109689702	NM_001042471.1	GSDMB	NP_001035936.1	ILMN_1666206	0006270615	S	1387	TACCAGTCTGTCCTCACTGCCATCGCCACTACCATCCTGTCACCAGTGGG	17	-	38060971-38061020	17q12c	Homo sapiens gasdermin B (GSDMB), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			PRO2521; PP4052	PRO2521; PP4052
Homo sapiens	RefSeq	NM_153247.1	ILMN_27050	SLC29A4	NM_153247.1	NM_153247.1		222962	23397535	NM_153247.1	SLC29A4	NP_694979.1	ILMN_1801377	0007650047	S	2788	TGCTGTGTCCCATCCCCCGTCTGTCTACTAACTGTACCGCACCGGCCATT	7	+	5310144-5310193	7p22.1c	Homo sapiens solute carrier family 29 (nucleoside transporters), member 4 (SLC29A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other [goid 5337] [evidence IEA]	PMAT; FLJ34923; ENT4	PMAT; FLJ34923; ENT4
Homo sapiens	RefSeq	XM_944305.1	ILMN_40381	LOC650651	XM_944305.1	XM_944305.1		650651	89030306	XM_944305.1	LOC650651	XP_949398.1	ILMN_1729898	0005360292	S	335	CGGATGTTTTCCTTGTCCCCAAGCGTGTAGTGCGCGCCAGCCGCCCCCTC					PREDICTED: Homo sapiens hypothetical LOC650651 (LOC650651), mRNA.					
Homo sapiens	RefSeq	XM_943677.1	ILMN_36365	LOC654053	XM_943677.1	XM_943677.1		654053	89028557	XM_943677.1	LOC654053	XP_948770.1	ILMN_1676480	0000780079	S	941	TGGGATTCGGCCTCTGGAAAGTGGTGGTAGTTCCAGATTTATGTGAATGT					PREDICTED: Homo sapiens similar to hypothetical LOC389634 (LOC654053), mRNA.					
Homo sapiens	RefSeq	NM_004268.4	ILMN_17489	MED17	NM_004268.4	NM_004268.4		9440	154813207	NM_004268.4	MED17	NP_004259.3	ILMN_3240092	0005360671	S	3073	ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTC	11	+	93185720-93185769	11q21a	Homo sapiens mediator complex subunit 17 (MED17), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 10198638] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10235267] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 9989412] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 12218053] [evidence IDA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 12218053] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 12037571] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 12218053] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12584197] [evidence IPI]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 10198638] [evidence IDA];  [goid 30374] [pmid 10235266] [evidence NAS]; Interacting selectively with the vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes [goid 42809] [pmid 10235266] [evidence NAS]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 10198638] [evidence IDA]	DRIP80; TRAP80; CRSP77; CRSP6; FLJ10812	MED17; CRSP77; FLJ10812; DRIP80; TRAP80
Homo sapiens	RefSeq	NM_019609.3	ILMN_26242	CPXM1	NM_019609.3	NM_019609.3		56265	62241005	NM_019609.3	CPXM1	NP_062555.1	ILMN_1712046	0000730577	S	2235	GGCGCCTGGAGCGGCTAAGGGGACAGAAGGATTGATACCTGCGGTTTAAG	20	-	2774820-2774835:2774836-2774869	20p13c	Homo sapiens carboxypeptidase X (M14 family), member 1 (CPXM1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CPX1; CPXM	CPX1; CPXM
Homo sapiens	RefSeq	NM_030929.3	ILMN_28149	KAZALD1	NM_030929.3	NM_030929.3		81621	34147508	NM_030929.3	KAZALD1	NP_112191.2	ILMN_1684755	0001450202	S	1716	CCTAAGCCCCAGTTGCACCTACTAACTGCAGTCCCTTTTGCTGTCTGCCG	10	+	102815142-102815191	10q24.31a	Homo sapiens Kazal-type serine peptidase inhibitor domain 1 (KAZALD1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	IGFBP-rP10; FKSG40; FKSG28; BONO1; bA108L7.1; FLJ24094; RP11-108L7.10	IGFBP-rP10; FKSG40; FKSG28; BONO1; bA108L7.1; FLJ24094; RP11-108L7.10
Homo sapiens	Unigene	Hs.576947	ILMN_129128	HS.576947	Hs.576947		Hs.576947		13719048	BG197361			ILMN_1914657	0001990241	S	164	GGCAGGCAACTGAGCCACCCCCACCTTTGCATGACCAGGCCCATAAAAAC					RST16603 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XR_038043.1	ILMN_340373	LOC646688	XR_038043.1	XR_038043.1		646688	169162696	XR_038043.1	LOC646688		ILMN_3282174	0006280370	M	1297	AGCTTCTGGTAGAAAAAAGGGGCAGCAGCTACCAAGAAACCAGCCCCTGG	1	+	164984419-164984468	1q24.1c	PREDICTED: Homo sapiens misc_RNA (LOC646688), miscRNA.					
Homo sapiens	RefSeq	XM_925814.1	ILMN_43365	LOC642265	XM_925814.1	XM_925814.1		642265	89029259	XM_925814.1	LOC642265	XP_930907.1	ILMN_1766894	0001050224	S	206	CCTCACCATCGCCTGGGAAGAGAAAGGAGAACTGGGCAATCAGGGTGTGG	9	+	39875167-39875192:39877209-39877232	9p13.1a	PREDICTED: Homo sapiens similar to chromosome 9 open reading frame 36 (LOC642265), mRNA.					
Homo sapiens	RefSeq	NM_015644.2	ILMN_5389	TTLL3	NM_015644.2	NM_015644.2		26140	51036591	NM_015644.2	TTLL3	NP_056459.2	ILMN_1680899	0000380563	I	2102	GCATTTTAGGCAGAGCCTCAGGTGTGTTAGAGGTCCCAGGGGCAGAGAGG	3	+	9837157-9837206	3p25.3c	Homo sapiens tubulin tyrosine ligase-like family, member 3 (TTLL3), transcript variant 2, mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	MGC120532; MGC120529; FLJ13898; HOTTL; DKFZP434B103	MGC120532; MGC120529; FLJ13898; HOTTL; DKFZP434B103
Homo sapiens	RefSeq	NM_020533.1	ILMN_6653	MCOLN1	NM_020533.1	NM_020533.1		57192	10092596	NM_020533.1	MCOLN1	NP_065394.1	ILMN_1764383	0006450056	S	1860	GTGAATTGATTCGACCTGACTGCCGTTGGACCGTAGGCCCTGGACTGCAG	19	+	7504673-7504681:7504682-7504722	19p13.2e	Homo sapiens mucolipin 1 (MCOLN1), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11013137] [evidence NAS]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [pmid 11030752] [evidence NAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient [goid 5261] [pmid 11030752] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MSTP080; TRPML1; MLIV; MST080; TRP-ML1; ML4; TRPM-L1	MSTP080; TRPML1; MLIV; MST080; TRP-ML1; ML4; TRPM-L1
Homo sapiens	RefSeq	NM_198537.1	ILMN_3913	YJEFN3	NM_198537.2	NM_198537.2		374887	94400926	NM_198537.2	YJEFN3	NP_940939.2	ILMN_1658679	0004050221	S	521	TGCGAGAAGATGGACATCCCCTTCCTGAGCTACCTGCCCACTGAGGTGCA	19	+	19507215-19507259:19507338-19507342	19p13.11a	Homo sapiens YjeF N-terminal domain containing 3 (YJEFN3), nuclear gene encoding mitochondrial protein, mRNA.				MGC138490	
Homo sapiens	RefSeq	XM_937931.1	ILMN_41732	UNC13A	XM_937931.2	XM_937931.2		23025	113428511	XM_937931.2	UNC13A	XP_943024.1	ILMN_1775403	0007380403	I	3533	CCTATTTTGCGGAGGAGAAATTGGAGATGAGCCGAGATTGCACCACTGGA				19p13.11d	PREDICTED: Homo sapiens unc-13 homolog A (C. elegans) (UNC13A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle [goid 16188] [evidence IEA]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001001960.1	ILMN_183987	OR5W2	NM_001001960.1	NM_001001960.1		390148	50233855	NM_001001960.1	OR5W2	NP_001001960.1	ILMN_1757164	0003310661	S	448	CTGGTGGGAATAGCAGATGCTTTGATACATATGACACTGGCCTTCCGCCT	11	-	55681561-55681610	11q11c	Homo sapiens olfactory receptor, family 5, subfamily W, member 2 (OR5W2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR5W3P; OR5W2P	OR5W3P; OR5W2P
Homo sapiens	RefSeq	NM_018244.3	ILMN_26543	UQCC	NM_018244.3	NM_018244.3		55245	41327684	NM_018244.3	UQCC	NP_060714.3	ILMN_1724734	0001170095	I	412	TGCGGCCCTGCGCATGTATACTAGCTGTGTGGAGAAAACTGACTTCGAGG	20	-	33961998-33962047	20q11.22b	Homo sapiens ubiquinol-cytochrome c reductase complex chaperone (UQCC), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]			BFZB; C20orf44; MGC141902; CBP3; MGC104353	MGC141902; BFZB; C20orf44; CBP3; MGC104353
Homo sapiens	RefSeq	NM_199513.1	ILMN_26543	UQCC	NM_018244.3	NM_018244.3		55245	41327684	NM_018244.3	UQCC	NP_060714.3	ILMN_1745152	0007040307	A	2200	CTCATTACAGCTGGGCACTATTTACATAAACCAGAGCTGAGCCAGGCAGG	20	-	33890455-33890504	20q11.22b	Homo sapiens ubiquinol-cytochrome c reductase complex chaperone (UQCC), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]			BFZB; C20orf44; MGC141902; CBP3; MGC104353	MGC141902; BFZB; CBP3; MGC104353
Homo sapiens	Unigene	Hs.542928	ILMN_106620	HS.542928	Hs.542928		Hs.542928		83104448	DB297507			ILMN_1882881	0005670008	S	402	GGAAATCTCACCTCTCCTAGTGGCTGGGGCACTGAGGTGTCTAAGAGCAC	3	+	148584910-148584959		DB297507 BRACE2 Homo sapiens cDNA clone BRACE2021448 3, mRNA sequence					
Homo sapiens	RefSeq	XR_000997.1	ILMN_28117	RPL31P11	NR_002595.1	NR_002595.1		641311	78126140	NR_002595.1	RPL31P11		ILMN_1745171	0003440743	S	1330	GGCCTCCACTATATCACCTGCAAACCCTTTCTCAGGATGCCCTGGCAAAC	1	-	161653663-161653712	1q23.3b	Homo sapiens ribosomal protein L31 pseudogene 11 (RPL31P11), non-coding RNA.					
Homo sapiens	RefSeq	XM_376444.3	ILMN_166364	LOC133491	XM_376444.4	XM_376444.4		133491	113416875	XM_376444.4	LOC133491	XP_376444.4	ILMN_1718030	0004260255	A	2057	ATCCACCTGTTTCTAGATGAAGGACACATTGCCTGGGGAAATGGCCTCGG	5	+	173365083-173365132	5q35.2b	PREDICTED: Homo sapiens hypothetical protein LOC133491 (LOC133491), mRNA.					
Homo sapiens	RefSeq	XR_038767.1	ILMN_334915	LOC644589	XR_038767.1	XR_038767.1		644589	169207271	XR_038767.1	LOC644589		ILMN_3275499	0000830468	M	25	GTTAGCCACACCCTCTGAGCTGGGATGAGCTGTGCTCCTGGTGGAAGCAA				14q21.3b	PREDICTED: Homo sapiens misc_RNA (LOC644589), miscRNA.					
Homo sapiens	RefSeq	NM_175734.3	ILMN_27337	C17ORF74	NM_175734.4	NM_175734.4		201243	154240731	NM_175734.4	C17orf74	NP_783861.3	ILMN_1810107	0006350326	S	1397	CCGACCATGTTTGTCCCACTCAGCCGGAATCCAGGGGGCAATGCCAACTA	17	+	7271358-7271407	17p13.1d	Homo sapiens chromosome 17 open reading frame 74 (C17orf74), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_017755.4	ILMN_9594	NSUN2	NM_017755.4	NM_017755.4		54888	39995081	NM_017755.4	NSUN2	NP_060225.4	ILMN_1680129	0003450093	S	2818	GCACCTCAGTGGTGTGTCATTAACATGCAGTGGGGTTAATATCTGAGGCC	5	-	6652540-6652589	5p15.31c	Homo sapiens NOP2/Sun domain family, member 2 (NSUN2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 17071714] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17071714] [evidence IDA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule [goid 30488] [pmid 17071714] [evidence IDA]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylcytosine [goid 16428] [pmid 17071714] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MISU; SAKI; FLJ20303; TRM4	MISU; SAKI; FLJ20303; TRM4
Homo sapiens	RefSeq	XM_925795.1	ILMN_31458	LOC653051	XM_925795.2	XM_925795.2		653051	113426597	XM_925795.2	LOC653051	XP_930888.1	ILMN_1672867	0000430327	S	1039	GGCGCTGTGTTCCCTGATGGGCTACCTTGGCAACTCCAGGGGTTAAGCAT	17	-	5845-5894	17p13.3g	PREDICTED: Homo sapiens similar to double C2-like domains, beta (LOC653051), mRNA.					
Homo sapiens	RefSeq	NM_198954.1	ILMN_2361	NUDT1	NM_198954.1	NM_198954.1		4521	40288285	NM_198954.1	NUDT1	NP_945192.1	ILMN_1654068	0000270259	A	269	AAGTGCAAGAAGGAGAGACCATCGAGGATGGGGCTAGGAGGGAGCTGCAG	7	+	2250848-2250887:2256018-2256027	7p22.2c	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 1 (NUDT1), transcript variant 4B, mRNA.		The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 8226881] [evidence TAS]	Catalysis of the reaction: 8-oxo-7,8-dihydroguanine triphosphate = 8-oxo-7,8-dihydroguanine phosphate + diphosphate [goid 8413] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 7713500] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the reaction: 8-oxo-7,8-dihydroguanine triphosphate = 8-oxo-7,8-dihydroguanine phosphate + diphosphate [goid 8413] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MTH1	MTH1
Homo sapiens	RefSeq	NM_001233.3	ILMN_177870	CAV2	NM_001233.3	NM_001233.3		858	38176290	NM_001233.3	CAV2	NP_001224.1	ILMN_1735220	0002630577	I	669	GCCATTCCCCTGGCCTTCATTGCGGGAATTCTCTTTGCCACCCTCAGCTG	7	+	115927676-115927725	7q31.2b	Homo sapiens caveolin 2 (CAV2), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15788404] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8552590] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 8552590] [evidence NAS]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 8552590] [evidence IDA]	Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [pmid 12743374] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [pmid 12743374] [evidence IDA]; The initial attachment of a transport vesicle membrane to the target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere [goid 48278] [pmid 12743374] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10212252] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8552590] [evidence IDA]	CAV; MGC12294	CAV; MGC12294
Homo sapiens	RefSeq	NM_001233.3	ILMN_177870	CAV2	NM_001233.3	NM_001233.3		858	38176290	NM_001233.3	CAV2	NP_001224.1	ILMN_2360730	0005910553	A	3226	TTGTTTTATTTGGGGCTGGGGGAGGTATATGATGAGCAGACTTCTCGGAA	7	+	115935756-115935805	7q31.2b	Homo sapiens caveolin 2 (CAV2), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15788404] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8552590] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 8552590] [evidence NAS]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 8552590] [evidence IDA]	Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [pmid 12743374] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [pmid 12743374] [evidence IDA]; The initial attachment of a transport vesicle membrane to the target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere [goid 48278] [pmid 12743374] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10212252] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8552590] [evidence IDA]	CAV; MGC12294	CAV; MGC12294
Homo sapiens	RefSeq	NM_001233.3	ILMN_177870	CAV2	NM_001233.3	NM_001233.3		858	38176290	NM_001233.3	CAV2	NP_001224.1	ILMN_1658835	0000620360	A	2779	CTGCCCTAGGCCATTGCAGCATCCTTAGATGGGACGCATAATCATTACCT	7	+	115935309-115935358	7q31.2b	Homo sapiens caveolin 2 (CAV2), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15788404] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8552590] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 8552590] [evidence NAS]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 8552590] [evidence IDA]	Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [pmid 12743374] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [pmid 12743374] [evidence IDA]; The initial attachment of a transport vesicle membrane to the target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere [goid 48278] [pmid 12743374] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10212252] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 8552590] [evidence IDA]	CAV; MGC12294	CAV; MGC12294
Homo sapiens	RefSeq	XM_497783.1	ILMN_17881	LOC441964	XM_497783.1	XM_497783.1		441964	51475290	XM_497783.1	LOC441964	XP_497783.1	ILMN_1700230	0003370044	S	121	AAAGAATCTGAGCACTGGAATAAGCCAGAGCGTGGCTTGGACATGCATTG	21	-	38583647-38583667:38583948-38583976	21q22.13b	PREDICTED: Homo sapiens similar to sperm protein SSP411 (LOC441964), mRNA.					
Homo sapiens	RefSeq	XM_926303.1	ILMN_31448	LOC642922	XM_926303.1	XM_926303.1		642922	89033749	XM_926303.1	LOC642922	XP_931396.1	ILMN_1693509	0002450484	S	1	ATGGAGGAGGTCCCCCTGCTGCCACACAAACAGCTCTTGCTCACATCCCA	11	+	2903231-2903280	11p15.4d	PREDICTED: Homo sapiens similar to CG13731-PA (LOC642922), mRNA.					
Homo sapiens	RefSeq	NM_199245.1	ILMN_10901	VAMP1	NM_199245.1	NM_199245.1		6843	40549445	NM_199245.1	VAMP1	NP_954740.1	ILMN_2295844	0004060110	I	715	CTGAGGAAGTGGGGCTATGCTGTGTGTCACTGGCTTGGGTTGGAGGGAGA	12	-	6573777-6573826	12p13.31d	Homo sapiens vesicle-associated membrane protein 1 (synaptobrevin 1) (VAMP1), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1976629] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9920726] [evidence IPI]	SYB1; VAMP-1; DKFZp686H12131	SYB1; VAMP-1; DKFZp686H12131
Homo sapiens	RefSeq	NM_016830.2	ILMN_10901	VAMP1	NM_199245.1	NM_199245.1		6843	40549445	NM_199245.1	VAMP1	NP_954740.1	ILMN_1737611	0006650639	A	2936	CATCCCGTTCTTCGGTTTGCCATGAGACGATGTGGGGTTTCCACTGTGTG	12	-	6571556-6571605	12p13.31d	Homo sapiens vesicle-associated membrane protein 1 (synaptobrevin 1) (VAMP1), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1976629] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9920726] [evidence IPI]	SYB1; VAMP-1; DKFZp686H12131	SYB1; VAMP-1; DKFZp686H12131
Homo sapiens	RefSeq	NR_002983.1	ILMN_173268	SNORA55	NR_002983.1	NR_002983.1		677834	91680847	NR_002983.1	SNORA55		ILMN_3238745	0003390360	S	14	TTTCCCATTCCTTGCTGCCTCGTGCCGGTGTGGGGACAGATGGTGCTACA	1	-	40033119-40033168	1p34.2d	Homo sapiens small nucleolar RNA, H/ACA box 55 (SNORA55), small nucleolar RNA.				ACA55	ACA55
Homo sapiens	RefSeq	NM_031913.1	ILMN_25459	FAM62C	NM_031913.2	NM_031913.2		83850	103472030	NM_031913.2	FAM62C	NP_114119.2	ILMN_1745764	0000610634	S	2576	CCAGCAGTGGAGCTGATCCCTACGTCCGTGTCTACTTGTTGCCAGAAAGG	3	+	139675770-139675819	3q22.3c	Homo sapiens family with sequence similarity 62 (C2 domain containing), member C (FAM62C), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			CHR3SYT	CHR3SYT
Homo sapiens	RefSeq	NM_001005737.1	ILMN_16112	CACNA2D4	NM_001005737.1	NM_001005737.1		93589	54607059	NM_001005737.1	CACNA2D4	NP_001005737.1	ILMN_2404493	0004640397	A	4531	AAGCTCTATCTGGGAACTCACCCCCAGCGCACACACATCTCCCCCAGGGT	12	-	1772075-1772124	12p13.33b	Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 4 (CACNA2D4), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RCD4	RCD4
Homo sapiens	RefSeq	NM_002729.2	ILMN_11926	HHEX	NM_002729.4	NM_002729.4		3087	126131100	NM_002729.4	HHEX	NP_002720.1	ILMN_1762712	0005130750	S	1505	CCAAGGTGTTAAGGGGATAGTACCTCCCAATTCAAGCAGAGAAACTGACC	10	+	94445134-94445183	10q23.33a	Homo sapiens hematopoietically expressed homeobox (HHEX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12826010] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12554669] [evidence IDA]	The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 12554669] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 12554669] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence ISS]; Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10552] [pmid 12655000] [evidence IDA]; Any process that decreases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10553] [pmid 15016828] [evidence IDA]; Any process that decreases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10553] [pmid 10871399] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 15016828] [evidence IDA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30177] [evidence ISS]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30948] [pmid 15016828] [evidence IDA]; The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure [goid 35050] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10871399] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15016828] [evidence IPI]; Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [pmid 12554669] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence ISS]	HEX; PRH; PRHX; HOX11L-PEN; HMPH	HEX; PRH; PRHX; HOX11L-PEN; HMPH
Homo sapiens	RefSeq	NM_181513.1	ILMN_12292	MRPL21	NM_181515.1	NM_181515.1		219927	31652227	NM_181515.1	MRPL21	NP_852616.1	ILMN_1744835	0006250576	A	399	GACCTTGCGTGTGGAGAGAGAATTCGACTGGAGAAGGTCCTGCTGGTTGG	11	-	68660909-68660923:68663983-68664017	11q13.2b	Homo sapiens mitochondrial ribosomal protein L21 (MRPL21), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC62013	MGC62013
Homo sapiens	RefSeq	NM_201520.1	ILMN_19800	SLC25A35	NM_201520.1	NM_201520.1		399512	41462411	NM_201520.1	SLC25A35	NP_958928.1	ILMN_1724612	0005870280	S	2511	GCATAGTTTCACGGTGTTCTGGGCCTCTGAAAGAAGAATGGGCTGCCACC	17	-	8191306-8191355	17p13.1c	Homo sapiens solute carrier family 25, member 35 (SLC25A35), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC120446; MGC120448; FLJ40217	MGC120446; MGC120448; FLJ40217
Homo sapiens	RefSeq	XM_001715175.1	ILMN_344554	LOC100127891	XM_001715175.1	XM_001715175.1		100127891	169171477	XM_001715175.1	LOC100127891	XP_001715227.1	ILMN_3187497	0006100156	A	1125	GGCTGTGCTGCGGGCAGGCAGCGGAGAGGGCTCGCGGCGAGGGCTCCAGC				7q32.2a	PREDICTED: Homo sapiens similar to hCG2042508 (LOC100127891), mRNA.					
Homo sapiens	RefSeq	XR_038252.1	ILMN_336397	LOC649553	XR_038252.1	XR_038252.1		649553	169170089	XR_038252.1	LOC649553		ILMN_3277307	0002640326	M	3074	TCCCTGCTGTCGCTCCTGGTTGGTGCGTGGCTCAGGCTAGGTCATTGAAC	7	+	64172871-64172920	7q11.21d	PREDICTED: Homo sapiens misc_RNA (LOC649553), miscRNA.					
Homo sapiens	RefSeq	XR_038252.1	ILMN_336397	LOC649553	XR_038252.1	XR_038252.1		649553	169170089	XR_038252.1	LOC649553		ILMN_3200830	0001980239	A	1454	ATGGCTGTGTGGTTCCGGGTGCTGGTGCTGTGGAAGTGGCAATGGCAGAA	7	+	64168295-64168297:64168722-64168768	7q11.21d	PREDICTED: Homo sapiens misc_RNA (LOC649553), miscRNA.					
Homo sapiens	RefSeq	NM_033050.2	ILMN_172835	SUCNR1	NM_033050.3	NM_033050.3		56670	144922723	NM_033050.3	SUCNR1	NP_149039.2	ILMN_1681601	0006560079	S	902	GCACTCAGGTCGTCATCAACTCCTTTTACATTGTGACACGGCCTTTGGCC	3	+	153081824-153081873	3q25.1c	Homo sapiens succinate receptor 1 (SUCNR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	GPR91	GPR91
Homo sapiens	RefSeq	NM_005421.1	ILMN_14407	TAL2	NM_005421.1	NM_005421.1		6887	4885618	NM_005421.1	TAL2	NP_005412.1	ILMN_2135833	0001440594	S	177	GGAGCAAAGCCTGCAACAAACGGGAGTGGCTGCTCAGGGGAACATTCTGG	9	+	107464775-107464824	9q31.2a	Homo sapiens T-cell acute lymphocytic leukemia 2 (TAL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1763056] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1763056] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	NR_023847.1	ILMN_366524	PEG3AS	NR_023847.1	NR_023847.1		100169890	191961822	NR_023847.1	PEG3AS		ILMN_3248202	0000050288	S	284	GGTGAAGGTTTTCTAACCTTTACCCCATGCCCTCAGCCAGTGTGGGTATT					Homo sapiens PEG3 antisense RNA (non-protein coding) (PEG3AS), non-coding RNA.					
Homo sapiens	RefSeq	NM_001012754.2	ILMN_18759	NHLRC3	NM_001012754.2	NM_001012754.2		387921	62821781	NM_001012754.2	NHLRC3	NP_001012772.1	ILMN_1698365	0002450753	I	761	GTCTTGGGTACTCCAGGCAAAAAAGGCACTAGTTTGAATCCTTTGCAGTT	13	+	38514295-38514344	13q13.3d	Homo sapiens NHL repeat containing 3 (NHLRC3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			DKFZp313M1221; DKFZp686E1140	DKFZp686E1140; DKFZp313M1221
Homo sapiens	RefSeq	XM_001723833.1	ILMN_340982	LOC646802	XM_001723833.1	XM_001723833.1		646802	169162987	XM_001723833.1	LOC646802	XP_001723885.1	ILMN_3240465	0006520239	S	485	TTCGGTGGGAGCAGGGGCCCTTTGCACATCCTAGGCACAGATGGTAATGT	2	-	130914970-130915019	2q21.1c	PREDICTED: Homo sapiens hypothetical LOC646802 (LOC646802), mRNA.					
Homo sapiens	RefSeq	NM_001003682.1	ILMN_15308	TMEM200B	NM_001003682.2	NM_001003682.2		399474	105554390	NM_001003682.2	TMEM200B	NP_001003682.1	ILMN_1682231	0001940731	S	1346	CCTAAGACTGGGAGGTAGGTTGGGATGTTACAGGCTGGGGCAGGCTCCCT	1	-	29447005-29447054	1p35.3a	Homo sapiens transmembrane protein 200B (TMEM200B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC90489; TTMB; MGC102864	MGC90489; MGC102864
Homo sapiens	RefSeq	XR_040180.1	ILMN_342727	MGC10981	XR_040180.1	XR_040180.1		84740	169166582	XR_040180.1	MGC10981		ILMN_3224987	0005550446	A	382	ATGTGTGGGTCCGCTGGACCACTTTGGTGTATCTTTGAGCCCCTTGAGTG				4p16.1d	PREDICTED: Homo sapiens misc_RNA (MGC10981), miscRNA.					
Homo sapiens	RefSeq	XM_943344.1	ILMN_44097	LOC648500	XM_943344.1	XM_943344.1		648500	89061133	XM_943344.1	LOC648500	XP_948437.1	ILMN_1804775	0007510181	S	791	CGTCTTCGGAGTTCAGCCACCTTAGCAAGTCCTGGGTTTGTTCTTCAGAT					PREDICTED: Homo sapiens hypothetical protein LOC648500 (LOC648500), mRNA.					
Homo sapiens	RefSeq	XM_937376.1	ILMN_309541	ANTXRL	NR_003601.1	NR_003601.1		195977	150378434	NR_003601.1	ANTXRL		ILMN_1668044	0001740491	A	1762	GCCCAAACATCTGCCTGAGACACAGCCCGGAGTACTTTTCCCAAGCACAG	10	+	47171016-47171023:47171093-47171134	10q11.22b	Homo sapiens anthrax toxin receptor-like (ANTXRL), non-coding RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_941520.1	ILMN_43658	LOC645676	XM_941520.2	XM_941520.2		645676	113412386	XM_941520.2	LOC645676	XP_946613.1	ILMN_1767535	0002230608	I	1148	TCCTTGCGTTCTTCCCCACCGTCCCCCGCTCCGCCCGACTCCGTCCGCGT				1q22b	PREDICTED: Homo sapiens hypothetical protein LOC645676, transcript variant 1 (LOC645676), mRNA.					
Homo sapiens	RefSeq	NM_022483.3	ILMN_5037	C5ORF28	NM_022483.3	NM_022483.3		64417	52856399	NM_022483.3	C5orf28	NP_071928.2	ILMN_2150465	0000240576	S	2805	GACAATGGCTTGAACCTGGGAGGCAGAGGTTGTAGTGAGCTGAGATGGGG	5	-	43480192-43480241	5p12c	Homo sapiens chromosome 5 open reading frame 28 (C5orf28), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC90226; MGC149524; FLJ21657	MGC90226; MGC149524; FLJ21657
Homo sapiens	RefSeq	NM_022483.3	ILMN_5037	C5ORF28	NM_022483.3	NM_022483.3		64417	52856399	NM_022483.3	C5orf28	NP_071928.2	ILMN_1694798	0006200300	S	2179	TCTCTGAGGAAAGATGGAGGGTTCATAAAGCAATGCCTTATCCACAGCAG	5	-	43480818-43480867	5p12c	Homo sapiens chromosome 5 open reading frame 28 (C5orf28), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC90226; MGC149524; FLJ21657	MGC90226; MGC149524; FLJ21657
Homo sapiens	RefSeq	NM_138697.2	ILMN_29317	TAS1R1	NM_177541.1	NM_177541.1		80835	29294620	NM_177541.1	TAS1R1	NP_803885.1	ILMN_1805197	0003710133	A	1000	GCGGCTTCGGTGGGTATTTTCTGCCTAAGTGCTACGTGATCCTCTGCCGC	1	+	6562110-6562159	1p36.31a	Homo sapiens taste receptor, type 1, member 1 (TAS1R1), transcript variant 4, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11917125] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates [goid 50917] [pmid 11917125] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 11917125] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11917125] [evidence NAS]	T1R1; gm148; GPR70; TR1	T1R1; gm148; GPR70; TR1
Homo sapiens	RefSeq	XR_037672.1	ILMN_351930	LOC729406	XR_037672.1	XR_037672.1		729406	169164486	XR_037672.1	LOC729406		ILMN_3229606	0004670010	A	357	AGGGCAGTGGCGGCCCAGGACAACGCGTCTACTTTCAGAGCCCCCCTGGG				2q33.3d	PREDICTED: Homo sapiens misc_RNA (LOC729406), miscRNA.					
Homo sapiens	RefSeq	NM_006262.3	ILMN_6395	PRPH	NM_006262.3	NM_006262.3		5630	66932907	NM_006262.3	PRPH	NP_006253.2	ILMN_1723678	0005960180	S	1723	TCCCCCCTCAGGACAAATCTACTCCAGCCACGATGAGAAGTGGGTGAGCC	12	+	47978638-47978687	12q13.12b	Homo sapiens peripherin (PRPH), mRNA.	A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter [goid 5883] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 1378416] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PRPH1; NEF4	PRPH1; NEF4
Homo sapiens	Unigene	Hs.543127	ILMN_106786	HS.543127	Hs.543127		Hs.543127		24814233	CA449813			ILMN_1837271	0007160541	S	370	AAGCAGTCAGCTCTTAGCAGCAGTTACACACTCCCACCCTCACCCCCATG	3	+	64302300-64302349		UI-H-EI1-ayy-a-16-0-UI.s1 NCI_CGAP_EI1 Homo sapiens cDNA clone UI-H-EI1-ayy-a-16-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038510.1	ILMN_345766	LOC100131783	XR_038510.1	XR_038510.1		100131783	169164356	XR_038510.1	LOC100131783		ILMN_3244300	0002510398	S	288	GCCAGCGACACATGGCCTAGTAACCGTCCGGCCGCGGCGCTGGCTTAAGC					PREDICTED: Homo sapiens misc_RNA (LOC100131783), miscRNA.					
Homo sapiens	Unigene	Hs.577306	ILMN_129487	HS.577306	Hs.577306		Hs.577306		80881174	DA554227			ILMN_1878066	0004610187	S	131	GGGCCTGCGACCCACATCCAGTCTCTCAGCAAATCCTGTTGGCTTCACTT	11	+	65837030-65837038:65842881-65842921		DA554227 HCHON2 Homo sapiens cDNA clone HCHON2004197 5, mRNA sequence					
Homo sapiens	RefSeq	NM_007355.2	ILMN_16000	HSP90AB1	NM_007355.2	NM_007355.2		3326	20149593	NM_007355.2	HSP90AB1	NP_031381.2	ILMN_1673711	0004830100	S	2185	AATGCTGCAGTTCCTGATGAGATCCCCCCTCTCGAGGGCGATGAGGATGC	6	+	44221261-44221310	6p21.1b	Homo sapiens heat shock protein 90kDa alpha (cytosolic), class B member 1 (HSP90AB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 2768249] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [evidence ISS]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Modulates the activity of nitric oxide synthase [goid 30235] [evidence ISS]; Interacting selectively with a tetratricopeptide repeat (TPR) domain of a protein, the consensus sequence of which is defined by a pattern of small and large hydrophobic amino acids and a structure composed of helices [goid 30911] [evidence ISS]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	HSP90-BETA; HSPC2; FLJ26984; D6S182; HSP90B; HSPCB	HSP90-BETA; HSPC2; FLJ26984; D6S182; HSP90B; HSPCB
Homo sapiens	RefSeq	NM_005519.1	ILMN_26960	HMX2	NM_005519.1	NM_005519.1		3167	70608169	NM_005519.1	HMX2	NP_005510.1	ILMN_1671619	0006960484	S	1282	GAGCCTGCTTCCTACCTAGACCGAACCAGTACGCTTTGAAAACCATTCGG	10	+	124899832-124899881	10q26.13c	Homo sapiens H6 family homeobox 2 (HMX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Nkx5-2; H6L	Nkx5-2; H6L
Homo sapiens	RefSeq	XR_039418.1	ILMN_333857	LOC100128585	XR_039418.1	XR_039418.1		100128585	169162582	XR_039418.1	LOC100128585		ILMN_3175415	0006660687	A	1356	CTTCAGCCTCGTTAGACAGCCTGGTGATGGAGGATGAAGAAACCATGTGC	1	+	153925862-153925911	1q22b	PREDICTED: Homo sapiens misc_RNA (LOC100128585), miscRNA.					
Homo sapiens	RefSeq	XR_039418.1	ILMN_333857	LOC100128585	XR_039418.1	XR_039418.1		100128585	169162582	XR_039418.1	LOC100128585		ILMN_3251868	0007550609	M	781	TGGCTTGCCGTTTGACTGGAATTGCCAGGGTGGCCGGCCGAGTCCCATGA	1	+	153925287-153925336	1q22b	PREDICTED: Homo sapiens misc_RNA (LOC100128585), miscRNA.					
Homo sapiens	RefSeq	XM_933284.1	ILMN_41902	LOC644116	XM_933284.1	XM_933284.1		644116	88982425	XM_933284.1	LOC644116	XP_938377.1	ILMN_1653945	0007150195	I	655	ATACTCAGAAAGTTCACTGCAACACCTGATTTAAACTACAACCAGGAGAC	5	-	43607683-43607732		PREDICTED: Homo sapiens hypothetical protein LOC644115, transcript variant 2 (LOC644116), mRNA.					
Homo sapiens	RefSeq	XM_942736.1	ILMN_31747	C10ORF64	XM_942736.1	XM_942736.1		159491	89031928	XM_942736.1	C10orf64	XP_947829.1	ILMN_1664488	0006400072	A	3184	TCTTCCCCCCAGCTTCATCTGTCCTCTGAGTAAGTAGCTCCAGGAAGAGC				10q11.22d	PREDICTED: Homo sapiens chromosome 10 open reading frame 64 (C10orf64), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XR_040404.1	ILMN_339936	C8ORF49	XR_040404.1	XR_040404.1		606553	169172384	XR_040404.1	C8orf49		ILMN_3307154	0004290471	A	637	TGCCTGCGAGGCTTAGCTTGGGAAGTGGAATCTCCAGGAATCTCCTTCGG				8p23.1a	PREDICTED: Homo sapiens misc_RNA (C8orf49), miscRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XR_040801.1	ILMN_341932	C14ORF139	XR_040801.1	XR_040801.1		79686	169206952	XR_040801.1	C14orf139		ILMN_3307206	0005290767	A	1327	GCCTCAGAGCAGCCAGCTAGGCGGGGAGTGGTAAATTTGGGACTTGTACC	14	-	94945274-94945323	14q32.13b	PREDICTED: Homo sapiens misc_RNA (C14orf139), miscRNA.					
Homo sapiens	RefSeq	XM_940166.1	ILMN_43773	LOC651055	XM_940166.1	XM_940166.1		651055	89061841	XM_940166.1	LOC651055	XP_945259.1	ILMN_1805437	0005670452	S	1153	GCTGTGTATGCCGTAGCCCATGCACTCCATGAGATGAATTTGCAGCAGGT					PREDICTED: Homo sapiens similar to EC2-V2R pheromone receptor (LOC651055), mRNA.					
Homo sapiens	Unigene	Hs.544351	ILMN_107775	HS.544351	Hs.544351		Hs.544351		2714382	AA704464			ILMN_1839905	0004560315	S	109	TCCAAAGCCACTCAACACCACAGCCTCGCATCTGTCTGACCTCCTCAGCG	6	-	156035270-156035319		zj19c01.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:450720 3 similar to contains Alu repetitive element;, mRNA sequence					
Homo sapiens	RefSeq	NM_033394.1	ILMN_182363	TANC1	NM_033394.1	NM_033394.1		85461	57164404	NM_033394.1	TANC1	NP_203752.1	ILMN_1772278	0003990324	S	6881	CCCCAGTCACGATTTGCATGTTCTCTGTAAGCTTCATCCATGCTGGTTAT	2	+	159796790-159796839	2q24.1e-q24.2a	Homo sapiens tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 (TANC1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ROLSB; TANC; KIAA1728	ROLSB; KIAA1728; TANC
Homo sapiens	RefSeq	NM_012427.3	ILMN_166216	KLK5	NM_001077491.1	NM_001077491.1		25818	117306171	NM_001077491.1	KLK5	NP_001070959.1	ILMN_1718731	0006660274	S	1143	GGGACAGCCCTGACACTCCTTTCAGACCCTCATTCCTTCCCAGAGATGTT	19	-	56138606-56138655	19q13.33d	Homo sapiens kallikrein-related peptidase 5 (KLK5), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10608802] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 10514489] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11054574] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 10608802] [evidence TAS]	KLKL2; KLK-L2; SCTE	KLKL2; KLK-L2; SCTE
Homo sapiens	RefSeq	NM_182789.2	ILMN_3393	PAIP1	NM_182789.2	NM_182789.2		10605	34452727	NM_182789.2	PAIP1	NP_877590.1	ILMN_2312386	0001580097	A	2006	GGGGGGAAAAACCCAACTTGGTGAACTCCCAGCTAAACAACCAAGACTTC	5	-	43562624-43562673	5p12b	Homo sapiens poly(A) binding protein interacting protein 1 (PAIP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9548260] [evidence TAS]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [pmid 9548260] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [pmid 11997512] [evidence TAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9548260] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11997512] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10970864] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9548260] [evidence IPI]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [pmid 9548260] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC12360	MGC12360
Homo sapiens	RefSeq	NM_001005241.1	ILMN_12100	OR4N4	NM_001005241.1	NM_001005241.1		283694	52546694	NM_001005241.1	OR4N4	NP_001005241.1	ILMN_1735042	0006770561	S	659	TCATCCTCTGCCATGTTCGTAGGGCAGCTTCTGAAGGGAAGAACAAGGCC	15	+	19884495-19884544	15q11.2b	Homo sapiens olfactory receptor, family 4, subfamily N, member 4 (OR4N4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR15-5; OR15-1	OR15-5; OR15-1
Homo sapiens	Unigene	Hs.570988	ILMN_123169	HS.570988	Hs.570988		Hs.570988		76879791	AB074172			ILMN_1849013	0004010100	S	770	GCAGTCTTACAGCCTAATTCTTCTTTGGACTGGTCCTTGGCAGCAGTTCC	5	-	55269084-55269133		Homo sapiens primary neuroblastoma cDNA, clone:Nbla10111, full insert sequence					
Homo sapiens	RefSeq	NM_025228.1	ILMN_26492	TRAF3IP3	NM_025228.1	NM_025228.1		80342	13435126	NM_025228.1	TRAF3IP3	NP_079504.1	ILMN_1780397	0003450154	S	1708	ACCTCAGTGACGAGTATCTCTCCTGCCTGCGTAAGCTGCAGCACTGTCGA	1	+	208021341-208021390	1q32.2b	Homo sapiens TRAF3 interacting protein 3 (TRAF3IP3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ44151; MGC163289; MGC117354; T3JAM; DJ434O14.3	FLJ44151; MGC163289; MGC117354; T3JAM; DJ434O14.3
Homo sapiens	Unigene	Hs.173957	ILMN_80452	HS.173957	Hs.173957		Hs.173957		8157574	AW967735			ILMN_1872568	0005090630	S	89	CCCTGCCCTCATGTTGCTTTGGGTCTAGTGGAGGAGAGAGACAGATAAGC					EST379810 MAGE resequences, MAGJ Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_024796.1	ILMN_169562	FLJ22639	XR_017960.1	XR_017960.1		79854	113420266	XR_017960.1	FLJ22639		ILMN_1702866	0003800719	S	867	GGAGGCCTTGACCGTCAGTAGCAGAGAGGGCAGCAGAAGCCTAATTCCCA				1p36.33b	PREDICTED: Homo sapiens hypothetical protein FLJ22639 (FLJ22639), misc RNA.					
Homo sapiens	RefSeq	XM_936101.1	ILMN_33514	LOC642031	XM_936101.2	XM_936101.2		642031	113417808	XM_936101.2	LOC642031	XP_941194.2	ILMN_1655694	0006770091	S	3014	GGTGCTCACCTGGGGCCTCCATCCCAGAAGCGCAGGGCTTATTTTTCTGA					PREDICTED: Homo sapiens hypothetical protein LOC642031 (LOC642031), mRNA.					
Homo sapiens	RefSeq	NM_173075.3	ILMN_365310	APBB2	NM_173075.3	NM_173075.3		323	195539385	NM_173075.3	APBB2	NP_775098.2	ILMN_3251699	0000380707	S	8609	AAACTGCTGAGATTACAGATGTGAGCCACTGCACCCAGCCCACTGACACG				4p14a-p13d	Homo sapiens amyloid beta (A4) precursor protein-binding, family B, member 2 (APBB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8855266] [evidence NAS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISS]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence ISS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 8855266] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of S phase of mitotic cell cycle activity [goid 45749] [evidence ISS]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [evidence ISS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]		
Homo sapiens	RefSeq	XM_001717665.1	ILMN_348084	LOC100133205	XM_001717665.1	XM_001717665.1		100133205	169169598	XM_001717665.1	LOC100133205	XP_001717717.1	ILMN_3246078	0006560092	S	2	TGTCTCTCTTTATCGAGCTAATGGCAAGAGGGAGCCCGCTCAGGCCTCAG	6	+	26989515-26989542:27032752-27032773	6p22.1d-p22.1c	PREDICTED: Homo sapiens hypothetical protein LOC100133205 (LOC100133205), mRNA.					
Homo sapiens	RefSeq	NM_016233.1	ILMN_10750	PADI3	NM_016233.2	NM_016233.2		51702	122939160	NM_016233.2	PADI3	NP_057317.2	ILMN_1758888	0003890601	S	2938	CCTCTGGATTGGTCTCAGGCTCTCTGTTGGCCTTTGGTCAGCGTTTCCAC	1	+	17483064-17483113	1p36.13e	Homo sapiens peptidyl arginine deiminase, type III (PADI3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of peptidyl-arginine to form peptidyl-citrulline [goid 18101] [evidence IEA]	Catalysis of the reaction: protein L-arginine + H2O = protein L-citrulline + NH3 [goid 4668] [pmid 10092850] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PDI3; MGC126308; PAD3; MGC126307	PDI3
Homo sapiens	RefSeq	NM_178172.2	ILMN_26066	GPIHBP1	NM_178172.2	NM_178172.2		338328	31342336	NM_178172.2	GPIHBP1	NP_835466.1	ILMN_1726210	0000770736	I	2210	CCGACAGAAGTCACTGCCTACCTCAGGGTCCCCTTACCTGGGTGGGAAAT	8	+	144370348-144370397	8q24.3f	Homo sapiens glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 (GPIHBP1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	GPI-HBP1	GPI-HBP1
Homo sapiens	RefSeq	XM_937357.1	ILMN_26066	GPIHBP1	NM_178172.2	NM_178172.2		338328	31342336	NM_178172.2	GPIHBP1	NP_835466.1	ILMN_1734076	0001990411	A	316	CAGAACTGCTCACATGGCCAGACCTGCACAACCCTCATTGCCCACGGGAA	8	+	144368322-144368371	8q24.3f	Homo sapiens glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 (GPIHBP1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	GPI-HBP1	
Homo sapiens	RefSeq	NM_178172.2	ILMN_26066	GPIHBP1	NM_178172.2	NM_178172.2		338328	31342336	NM_178172.2	GPIHBP1	NP_835466.1	ILMN_2307150	0004730377	A	481	TGCAATGTCCCACCCTGGCAAAGCTCCCGAGTCCAGGACCCAACAGGCAA	8	+	144368619-144368668	8q24.3f	Homo sapiens glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 (GPIHBP1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	GPI-HBP1	GPI-HBP1
Homo sapiens	RefSeq	XR_018751.2	ILMN_178048	LOC148430	XR_018751.2	XR_018751.2		148430	169161820	XR_018751.2	LOC148430		ILMN_3211079	0000870196	A	593	CTTATGCCTGCACCCAGGGGCACTGGCATCGTCTCCGCACCTGTGCCCAA				1q23.3a	PREDICTED: Homo sapiens misc_RNA (LOC148430), miscRNA.					
Homo sapiens	Unigene	Hs.438937	ILMN_92093	HS.438937	Hs.438937		Hs.438937		34529519	AK123875			ILMN_1837102	0006060554	S	2493	CGAGAAAAGGAAGGGTCTCGACGTGCGGAAACAAGACGGATGCCAGGAAA	9	-	123618044-123618093		Homo sapiens cDNA FLJ41881 fis, clone OCBBF2021833					
Homo sapiens	RefSeq	NM_021635.1	ILMN_5178	PBOV1	NM_021635.1	NM_021635.1		59351	11056009	NM_021635.1	PBOV1	NP_067648.1	ILMN_1729864	0004860241	S	2091	CCAGAACTCTAATTGGACCACCCTGAAGCTTAGGACTACCAGCCATACAA	6	-	138579181-138579230	6q23.3d	Homo sapiens prostate and breast cancer overexpressed 1 (PBOV1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			UC28; UROC28; dJ171N11.2	UC28; UROC28; dJ171N11.2
Homo sapiens	RefSeq	XM_933558.1	ILMN_43104	LOC646365	XM_933558.1	XM_933558.1		646365	89040534	XM_933558.1	LOC646365	XP_938651.1	ILMN_2071898	0002650670	S	61	CCTGGAAAAGCGACTCGCGCCTCTGGGAAGCCGCAGCCCCAGACTCCAGT	16	+	84390572-84390621	16q24.1b	PREDICTED: Homo sapiens hypothetical LOC646365 (LOC646365), mRNA.					
Homo sapiens	RefSeq	NM_012319.2	ILMN_170037	SLC39A6	NM_012319.3	NM_012319.3		25800	153252200	NM_012319.3	SLC39A6	NP_036451.3	ILMN_1750394	0007650431	S	2217	GACTTTGCTGTTCTACTAAAGGCTGGCATGACCGTTAAGCAGGCTGTCCT	18	-	33691160-33691209	18q12.2a	Homo sapiens solute carrier family 39 (zinc transporter), member 6 (SLC39A6), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	LIV-1	LIV-1
Homo sapiens	RefSeq	NM_004830.2	ILMN_162638	MED23	NM_004830.2	NM_004830.2		9439	28558970	NM_004830.2	MED23	NP_004821.2	ILMN_1690999	0004900474	I	5006	GTTAATTGCTTTTGCAGGTTGACACTCTCACCTGACAGATGATGTAATTC	6	-	131949737-131949786	6q23.2a	Homo sapiens mediator complex subunit 23 (MED23), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 9989412] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9989412] [evidence TAS]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 9989412] [evidence TAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9989412] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17438371] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [pmid 9989412] [evidence IDA]	MED23; DKFZp434H0117; DRIP130; CRSP133; CRSP130; SUR2	MED23; DKFZp434H0117; CRSP3; DRIP130; CRSP133; CRSP130; SUR2
Homo sapiens	RefSeq	XR_001406.1	ILMN_309162	NANOS3	NM_001098622.1	NM_001098622.1		342977	148886759	NM_001098622.1	NANOS3	NP_001092092.1	ILMN_1804007	0006220373	A	869	CTTTGTGCCATCTGCCGTTTCCCTAGTGCTGGGCATCCAGTCAGCCCTCA	19	+	13852494-13852543	19p13.12c	Homo sapiens nanos homolog 3 (Drosophila) (NANOS3), mRNA.		The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC120114; NOS3; NANOS1L	
Homo sapiens	RefSeq	XM_937137.1	ILMN_33304	KIAA1107	XM_937137.1	XM_937137.1		23285	88951498	XM_937137.1	KIAA1107	XP_942230.1	ILMN_1793435	0004180382	A	4082	CGAGCATCACCATGGCTAGTTTTTCCTCTGAAGATTGTTCGCCTCAAGGC					PREDICTED: Homo sapiens KIAA1107 (KIAA1107), mRNA.					
Homo sapiens	RefSeq	NM_000707.2	ILMN_173581	AVPR1B	NM_000707.2	NM_000707.2		553	13112055	NM_000707.2	AVPR1B	NP_000698.1	ILMN_1680521	0006280376	S	2073	CAGGCCTAGGATGGTGCTGTCTAGGGGTCCACGGGTGGCAGGAATTCAGA	1	+	204398066-204398115	1q32.1h	Homo sapiens arginine vasopressin receptor 1B (AVPR1B), mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10858434] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10858434] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7805841] [evidence TAS]	The regulation of blood pressure mediated by the signaling molecule vasopressin. Vasopressin is produced in the hypothalamus, and affects vasoconstriction, and renal water transport [goid 1992] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10858434] [evidence TAS]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 7805841] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 7929452] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vasopressin to initiate a change in cell activity [goid 5000] [pmid 7805841] [evidence TAS]; Interacting selectively with protein kinase C [goid 5080] [pmid 10858434] [evidence TAS]	AVPR3	AVPR3
Homo sapiens	RefSeq	NM_080540.2	ILMN_10235	COLQ	NM_080544.2	NM_080544.2		8292	116805308	NM_080544.2	COLQ	NP_536805.1	ILMN_1695991	0002030400	A	2430	GGCCTGGGGAGATGTTGTTTTCATGCTGCTTCCACCATCACACTGGGGTT	3	-	15466685-15466734	3p24.3e	Homo sapiens collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase (COLQ), transcript variant VIII, mRNA.	A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [pmid 9689136] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9689136] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of acetylcholine that occurs in the synaptic cleft during synaptic transmission [goid 1507] [pmid 9689136] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific asymmetric distribution [goid 8105] [pmid 9689136] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]		EAD	EAD
Homo sapiens	RefSeq	NM_152657.3	ILMN_20688	GGN	NM_152657.3	NM_152657.3		199720	33286435	NM_152657.3	GGN	NP_689870.3	ILMN_1691719	0005820577	A	1772	ATGGTCCTCGCGAACGAGCTACAGCTACCGTGCCTGACAGCAGTGGTGGA	19	-	43568055-43568104	19q13.2a	Homo sapiens gametogenetin (GGN), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [evidence ISS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	FLJ35713; MGC33369	FLJ35713; MGC33369
Homo sapiens	Unigene	Hs.563863	ILMN_116635	HS.563863	Hs.563863		Hs.563863		6087136	AW118552			ILMN_1843855	0000070324	S	62	CGGAGGGGGGAAGTTTGAAATTGGGGTGCCAACTTGATTGGGTTCTCGTG					xe79e11.x1 NCI_CGAP_Brn35 Homo sapiens cDNA clone IMAGE:2614124 3 similar to contains MER18.b3 MER18 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_031263.1	ILMN_16515	HNRPK	NM_031263.1	NM_031263.1		3190	14165436	NM_031263.1	HNRPK	NP_112553.1	ILMN_1712357	0000610494	A	1006	GACGAGGCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCA	9	-	85776636-85776685	9q21.32c	Homo sapiens heterogeneous nuclear ribonucleoprotein K (HNRPK), transcript variant 3, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CSBP; TUNP; FLJ41122; HNRNPK	CSBP; TUNP; FLJ41122; HNRNPK
Homo sapiens	RefSeq	NM_031263.1	ILMN_16515	HNRPK	NM_031263.1	NM_031263.1		3190	14165436	NM_031263.1	HNRPK	NP_112553.1	ILMN_2378048	0005820619	A	2106	TTTCAGCTCCTCTGTTGGACATATAAGTGCATCTCTTGTTGGACATAGGC	9	-	85773503-85773552	9q21.32c	Homo sapiens heterogeneous nuclear ribonucleoprotein K (HNRPK), transcript variant 3, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CSBP; TUNP; FLJ41122; HNRNPK	CSBP; TUNP; FLJ41122; HNRNPK
Homo sapiens	RefSeq	NM_014554.2	ILMN_8391	SENP1	NM_014554.2	NM_014554.2		29843	45505133	NM_014554.2	SENP1	NP_055369.1	ILMN_3242851	0000780291	S	4540	TGCACAAGGTAGAAGTTAGTGACCCTGAGACCATCTTACCACCCTGGACC	12	-	48436893-48436942	12q13.11c	Homo sapiens SUMO1/sentrin specific peptidase 1 (SENP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10652325] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10652325] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein [goid 16926] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [pmid 10652325] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	SuPr-2	SuPr-2
Homo sapiens	RefSeq	NM_152472.1	ILMN_25108	ZNF578	NM_152472.1	NM_152472.1		147660	22748994	NM_152472.1	ZNF578	NP_689685.1	ILMN_1693996	0004490400	S	1107	GCGGAGAGAAACCTTACAAGTGTAATGAGTGTGGTAAGGCTCACAATCAC	19	+	57707131-57707180	19q13.41a	Homo sapiens zinc finger protein 578 (ZNF578), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ31384	FLJ31384
Homo sapiens	Unigene	Hs.566428	ILMN_118753	HS.566428	Hs.566428		Hs.566428		6701331	AW294695			ILMN_1905489	0006590133	S	358	TGGCTGCAGAATGTTAAGGTCCCAACAGGACAACAGGGGCAGGTGTCGGC	6	+	170304097-170304132		UI-H-BW0-aim-a-02-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2729738 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001725489.1	ILMN_340426	LOC100129395	XM_001725489.1	XM_001725489.1		100129395	169210909	XM_001725489.1	LOC100129395	XP_001725541.1	ILMN_3182996	0006270026	A	4217	TTTTCCTGGTTGGCTGAGGCTCCTTTGTCAGCGGTCTGGAAAGAGAGGGA	17	-	34135320-34135369	17q12c	PREDICTED: Homo sapiens similar to NS5ATP13TP1 (LOC100129395), mRNA.					
Homo sapiens	RefSeq	NM_024794.1	ILMN_25901	ABHD9	NM_024794.1	NM_024794.1		79852	13376163	NM_024794.1	ABHD9	NP_079070.1	ILMN_1699750	0002710070	S	1641	AGCTGCACAGACCTTAAACCCTGACCTTCCTGTCCCTGCCTTCGACCTCC	19	-	15198849-15198898	19p13.12b	Homo sapiens abhydrolase domain containing 9 (ABHD9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC131519; FLJ22408	MGC131519; FLJ22408
Homo sapiens	RefSeq	XM_936439.1	ILMN_44423	LOC653899	XM_936439.1	XM_936439.1		653899	89038806	XM_936439.1	LOC653899	XP_941532.1	ILMN_1665751	0002970328	S	274	GGCAGAATAAATGAACCAGGTTCCTTTGCATATGGTAATTCTGTAGAGTG					PREDICTED: Homo sapiens similar to hect domain and RLD 2 (LOC653899), mRNA.					
Homo sapiens	RefSeq	NM_032902.5	ILMN_27430	PPP1R16A	NM_032902.5	NM_032902.5		84988	42476160	NM_032902.5	PPP1R16A	NP_116291.1	ILMN_1757882	0003140408	S	2162	TACTGTACAGGACACTGGCCCCTCTCAGGTCAGAAGACATGCCTGGAGGG	8	+	145698200-145698249	8q24.3h	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 16A (PPP1R16A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]	MYPT3; MGC14333	MYPT3; MGC14333
Homo sapiens	RefSeq	NM_012337.2	ILMN_7492	CCDC19	NM_012337.2	NM_012337.2		25790	81295815	NM_012337.2	CCDC19	NP_036469.2	ILMN_3245143	0006040709	S	1471	AACCAGCAGAAGGAAGTGCAGAACCGGATTGCCACCTTTGAGGAGGGCCG	1	-	159842808-159842857	1q23.2c	Homo sapiens coiled-coil domain containing 19 (CCDC19), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10524255] [evidence TAS]			RP11-190A12.6; NESG1	RP11-190A12.6; NESG1
Homo sapiens	RefSeq	NM_175055.2	ILMN_13915	HIST3H2BB	NM_175055.2	NM_175055.2		128312	28872748	NM_175055.2	HIST3H2BB	NP_778225.1	ILMN_1764986	0001440433	S	389	CACCAGCTCCAAGTGAGGCGTTCCTCGGCGTCCTGAACCCAAAGGCTCTT	1	+	226712819-226712834:226712835-226712868	1q42.13c	Homo sapiens histone cluster 3, H2bb (HIST3H2BB), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	NM_005127.2	ILMN_180567	CLEC2B	NM_005127.2	NM_005127.2		9976	37577106	NM_005127.2	CLEC2B	NP_005118.2	ILMN_1784608	0002490161	S	1794	ACAGGGTAGACAGGCCAGGGGAAAAAGGCACTCAGGGCACACAGCATTGC	12	-	10005162-10005211	12p13.31a	Homo sapiens C-type lectin domain family 2, member B (CLEC2B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9038101] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 9038101] [evidence TAS]	AICL; IFNRG1; HP10085; CLECSF2	AICL; IFNRG1; HP10085; CLECSF2
Homo sapiens	RefSeq	NM_198281.1	ILMN_8803	GPRIN3	NM_198281.2	NM_198281.2		285513	112821689	NM_198281.2	GPRIN3	NP_938022.2	ILMN_1776435	0006250010	S	2808	CAACTGCTGCGTCCGTCCTGCCCCGTCTTCTGTGTTAGATTGAAAGGGAG	4	-	90387946-90387953:90387954-90387995	4q22.1c	Homo sapiens GPRIN family member 3 (GPRIN3), mRNA.				GRIN3; FLJ42625	
Homo sapiens	RefSeq	NM_212552.2	ILMN_28776	BOLA3	NM_212552.2	NM_212552.2		388962	78486585	NM_212552.2	BOLA3	NP_997717.2	ILMN_2258488	0007150687	I	210	GGTTGTGGGGCGATGTATGAAATTAAAATTGAATCAGAAGAATTTAAGGA	2	-	74369435-74369484	2p13.1b	Homo sapiens bolA homolog 3 (E. coli) (BOLA3), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_212552.2	ILMN_28776	BOLA3	NM_212552.2	NM_212552.2		388962	78486585	NM_212552.2	BOLA3	NP_997717.2	ILMN_2343010	0006520576	A	324	CATGGATTGCGGATATTTACCTCTGTCCCCAAACGCTGACCACGCCCTGG	2	-	74362708-74362719:74362720-74362757	2p13.1b	Homo sapiens bolA homolog 3 (E. coli) (BOLA3), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_001004308.1	ILMN_17099	ZCCHC16	NM_001004308.1	NM_001004308.1		340595	51972189	NM_001004308.1	ZCCHC16	NP_001004308.1	ILMN_1786004	0000240438	A	1321	CTTGCCAAACGTTCTCGAGCTCCGGCAACGACAAATAACACAGCTCACCA	X	+	111585492-111585541	Xq23a	Homo sapiens zinc finger, CCHC domain containing 16 (ZCCHC16), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Mart4; Mar4; FLJ46608	Mart4; Mar4; FLJ46608
Homo sapiens	RefSeq	NM_018200.2	ILMN_12016	HMG20A	NM_018200.2	NM_018200.2		10363	21359925	NM_018200.2	HMG20A	NP_060670.1	ILMN_1678290	0006250180	S	3496	GTCTGTGCCACCTCCTCTCTCCTCTGTGCTCAGTGAGGAGGCAGTAAATG	15	+	75564611-75564660	15q24.3b	Homo sapiens high-mobility group 20A (HMG20A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10773667] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10773667] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10773667] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	HMGX1; FLJ10739	HMGX1; FLJ10739
Homo sapiens	RefSeq	NM_032941.1	ILMN_26852	RECQL	NM_032941.1	NM_032941.1		5965	14591901	NM_032941.1	RECQL	NP_116559.1	ILMN_1692705	0006270674	A	1561	GGTGGTGATGGAAAATGTGGGACAGCAGAAGCTTTATGAGATGGTATCAT	12	-	21519060-21519109	12p12.1e	Homo sapiens RecQ protein-like (DNA helicase Q1-like) (RECQL), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7961977] [evidence TAS]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 7961977] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [pmid 7961977] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15886194] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RecQ1; RECQL1	RecQ1; RECQL1
Homo sapiens	RefSeq	NM_032941.1	ILMN_26852	RECQL	NM_032941.1	NM_032941.1		5965	14591901	NM_032941.1	RECQL	NP_116559.1	ILMN_2380999	0003890750	A	1828	TTGGATGGGAAAGGGTGCAGCAAAACTGAGAGTAGCAGGTGTTGTGGCTC	12	-	21515692-21515741	12p12.1e	Homo sapiens RecQ protein-like (DNA helicase Q1-like) (RECQL), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7961977] [evidence TAS]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 7961977] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [pmid 7961977] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15886194] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RecQ1; RECQL1	RecQ1; RECQL1
Homo sapiens	RefSeq	NR_002727.1	ILMN_5168	RFPL1S	NR_002727.1	NR_002727.1		10740	84872006	NR_002727.1	RFPL1S		ILMN_2198594	0001740288	S	3548	AGCACCCATGTGAGGAACAGCGAGCTGGGGTCATTTCACCTCCTCCTAGG	22	-	28164521-28164570	22q12.2a	Homo sapiens RFPL1 antisense RNA (non-protein coding) (RFPL1S), non-coding RNA.					
Homo sapiens	RefSeq	NM_021026.1	ILMN_5168	RFPL1S	NR_002727.1	NR_002727.1		10740	84872006	NR_002727.1	RFPL1S		ILMN_1797383	0004010592	S	83	GAGTGTCTTGAGTATCTGTCCTGTGATAAACCCGGGCACTACTGATGCTC	22	-	28167986-28168035	22q12.2a	Homo sapiens RFPL1 antisense RNA (non-protein coding) (RFPL1S), non-coding RNA.					RNF78; MGC132428
Homo sapiens	RefSeq	NM_003407.1	ILMN_1557	ZFP36	NM_003407.2	NM_003407.2		7538	141802261	NM_003407.2	ZFP36	NP_003398.1	ILMN_1720829	0002900348	S	1414	CCAGTGTCTCCTGGTAACTGGAACCTCTCCTGAGGGGGAATCCTGGTGCT	19	+	39899714-39899763	19q13.2a	Homo sapiens zinc finger protein 36, C3H type, homolog (mouse) (ZFP36), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9703499] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10751406] [evidence IDA]	Shortening of the poly(A) tail of a nuclear-transcribed mRNA from full length to an oligo(A) length [goid 289] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [pmid 11782475] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [pmid 10751406] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myeloid cell differentiation [goid 45638] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IEA]; Any process that decreases the stability of an RNA molecule, making it more vulnerable to degradative processes [goid 50779] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with single-stranded RNA [goid 3727] [pmid 9703499] [evidence TAS]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 11782475] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16364915] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with AU-rich elements within the 3' untranslated region of mRNAs [goid 17091] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NUP475; GOS24; TIS11; TTP; G0S24; RNF162A	NUP475; GOS24; TIS11; TTP; G0S24; RNF162A
Homo sapiens	RefSeq	NM_032112.2	ILMN_4156	MRPL43	NM_032112.2	NM_032112.2		84545	28872733	NM_032112.2	MRPL43	NP_115488.2	ILMN_1700477	0006940521	A	305	AATACCTTAACGGGGCTGTGCGCGAGGAGAGCATCCACTGCAAGTCGGTC	10	-	102746688-102746732:102746847-102746851	10q24.31a	Homo sapiens mitochondrial ribosomal protein L43 (MRPL43), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [pmid 11543634] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11543634] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11543634] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [pmid 11543634] [evidence NAS]	MGC48892; MGC17989; bMRP36a	MGC48892; MGC17989; bMRP36a
Homo sapiens	RefSeq	NM_032112.2	ILMN_4156	MRPL43	NM_032112.2	NM_032112.2		84545	28872733	NM_032112.2	MRPL43	NP_115488.2	ILMN_2258774	0003060184	I	688	ATGAAGAGCTGCCTGTTTCTTTCCAGTGCCTGCTTCTGGGGGCAGTGACC	10	-	102746305-102746354	10q24.31a	Homo sapiens mitochondrial ribosomal protein L43 (MRPL43), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [pmid 11543634] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11543634] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11543634] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [pmid 11543634] [evidence NAS]	MGC48892; MGC17989; bMRP36a	MGC48892; MGC17989; bMRP36a
Homo sapiens	RefSeq	NM_004253.2	ILMN_18765	PLAA	NM_004253.3	NM_004253.3		9373	142377242	NM_004253.3	PLAA	NP_004244.1	ILMN_1704410	0002690762	I	2873	ACGGAGGTCTCAATTTAACTCCAGGCTTAGATCCCAGTTTCCTTTTGCCC	9	-	26894828-26894877	9p21.2a	Homo sapiens phospholipase A2-activating protein (PLAA), transcript variant 2, mRNA.		The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [pmid 9931468] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9931468] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Increases the activity of the enzyme phospholipase A2 [goid 16005] [pmid 9931468] [evidence TAS]	FLJ11281; PLA2P; PLAP; FLJ12699	FLJ11281; PLA2P; PLAP; FLJ12699
Homo sapiens	Unigene	Hs.574341	ILMN_126522	HS.574341	Hs.574341		Hs.574341		27847838	BX108347			ILMN_1886395	0002650632	S	156	AAATGACAAATGCCCTGAATTATTTGCAAATAGAATTGCTAATGaaaaag	16	-	9760662-9760711		BX108347 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone IMAGp998G11618, mRNA sequence					
Homo sapiens	RefSeq	NR_029635.1	ILMN_388263	MIR221	NR_029635.1	NR_029635.1		407006	262206342	NR_029635.1	MIR221		ILMN_3310326	0005910059	S	49	TGTTCGTTAGGCAACAGCTACATTGTCTGCTGGGTTTCAGGCTACCTGGA				Xp11.3b	Homo sapiens microRNA 221 (MIR221), microRNA.					
Homo sapiens	RefSeq	NM_172198.1	ILMN_21180	KCND3	NM_172198.1	NM_172198.1		3752	27436985	NM_172198.1	KCND3	NP_751948.1	ILMN_1727438	0002600367	A	2473	CTCCCCCCTTTCCCCACTATTTCTGCCTGCCCCATTGTACCCCTAGCACT	1	-	112326578-112326627	1p13.2d	Homo sapiens potassium voltage-gated channel, Shal-related subfamily, member 3 (KCND3), transcript variant 2, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8734615] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8734615] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA];  [goid 5250] [pmid 8734615] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KV4.3; KCND3S; KCND3L; KSHIVB; MGC142037; MGC142035	KV4.3; KCND3S; KCND3L; KSHIVB; MGC142037; MGC142035
Homo sapiens	RefSeq	NM_172198.1	ILMN_21180	KCND3	NM_172198.1	NM_172198.1		3752	27436985	NM_172198.1	KCND3	NP_751948.1	ILMN_2337856	0003440242	A	2536	GGAAGGAAAAAGAGGTAGCAAAGGGGCACCTGAGGTTCACGCTGCTAGCG	1	-	112326515-112326564	1p13.2d	Homo sapiens potassium voltage-gated channel, Shal-related subfamily, member 3 (KCND3), transcript variant 2, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8734615] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8734615] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA];  [goid 5250] [pmid 8734615] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KV4.3; KCND3S; KCND3L; KSHIVB; MGC142037; MGC142035	KV4.3; KCND3S; KCND3L; KSHIVB; MGC142037; MGC142035
Homo sapiens	RefSeq	NM_014234.3	ILMN_9238	HSD17B8	NM_014234.3	NM_014234.3		7923	20143980	NM_014234.3	HSD17B8	NP_055049.1	ILMN_1715324	0005700056	S	694	CCGATGGGACACTTGGGGGACCCTGAGGATGTGGCAGATGTGGTCGCATT	6	+	33173926-33173953:33174152-33174173	6p21.32a	Homo sapiens hydroxysteroid (17-beta) dehydrogenase 8 (HSD17B8), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6703] [pmid 97001166] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [pmid 97001166] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: testosterone + NAD+ = androst-4-ene-3,17-dione + NADH [goid 50327] [evidence IEA]	FABGL; FABG; dJ1033B10.9; RING2; H2-KE6; KE6; D6S2245E; HKE6	FABGL; FABG; dJ1033B10.9; RING2; H2-KE6; KE6; D6S2245E; HKE6
Homo sapiens	RefSeq	NM_018215.2	ILMN_30225	FLJ10781	NM_018215.2	NM_018215.2		55228	39780596	NM_018215.2	FLJ10781	NP_060685.2	ILMN_1794490	0006580400	S	3449	TGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAAT	19	-	51661742-51661791	19q13.32b	Homo sapiens hypothetical protein FLJ10781 (FLJ10781), mRNA.					
Homo sapiens	RefSeq	NM_001010983.1	ILMN_178880	GLT8D1	NM_001010983.1	NM_001010983.1		55830	58331224	NM_001010983.1	GLT8D1	NP_001010983.1	ILMN_1796341	0001740722	I	640	GCCCAGAGCGTGTCAAGGGAGACAGCCACATCACGCCAGAAATACATGAC	3	-	52738865-52738914	3p21.1d	Homo sapiens glycosyltransferase 8 domain containing 1 (GLT8D1), transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	DKFZp781O20198; FLJ14611; AD-017; MSTP139	FLJ14611; AD-017; MSTP139; DKFZp781O20198
Homo sapiens	RefSeq	XR_038088.1	ILMN_338677	LOC100133220	XR_038088.1	XR_038088.1		100133220	169208308	XR_038088.1	LOC100133220		ILMN_3238652	0005270092	S	3899	GCATGCAGTCTCTTGCAGTACCTCATTCAGCCAAGTATTTGTTCTCTTCC	15	+	83593525-83593574	15q25.3a	PREDICTED: Homo sapiens misc_RNA (LOC100133220), miscRNA.					
Homo sapiens	RefSeq	NM_013267.2	ILMN_2822	GLS2	NM_013267.2	NM_013267.2		27165	20336213	NM_013267.2	GLS2	NP_037399.2	ILMN_1677439	0003800035	A	2234	GGGAGTCAAAATACCCCATTCCCTCAGCAGACAGAGTACAGAGAAGGGCC	12	-	56865075-56865124	12q13.2c	Homo sapiens glutaminase 2 (liver, mitochondrial) (GLS2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10620514] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 10620514] [evidence EXP]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 10620514] [evidence TAS]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [pmid 10620514] [evidence EXP]; Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [pmid 10620514] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11163757] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [evidence IEA]	hLGA; GLS; LGA; GA; MGC71567	hLGA; GLS; LGA; GA; MGC71567
Homo sapiens	RefSeq	NM_013267.2	ILMN_2822	GLS2	NM_013267.2	NM_013267.2		27165	20336213	NM_013267.2	GLS2	NP_037399.2	ILMN_1706070	0004390095	I	738	CATTCCTGATTTTGAGGAGTTCACGGGCCATGTGGATCGCATCTTTGAGG	12	-	56872861-56872910	12q13.2c	Homo sapiens glutaminase 2 (liver, mitochondrial) (GLS2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10620514] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 10620514] [evidence EXP]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 10620514] [evidence TAS]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]	Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [pmid 10620514] [evidence EXP]; Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [pmid 10620514] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11163757] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: L-glutamine + H2O = L-glutamate + NH3 [goid 4359] [evidence IEA]	hLGA; GLS; LGA; GA; MGC71567	hLGA; GLS; LGA; GA; MGC71567
Homo sapiens	RefSeq	NM_133491.2	ILMN_17629	SAT2	NM_133491.2	NM_133491.2		112483	34147485	NM_133491.2	SAT2	NP_597998.1	ILMN_1746883	0001980762	S	684	GCTTTCAAGGAGAGGCAACGAGAAAGTTGGCAGGAAAGTGACGCCATCCC	17	-	7470480-7470489:7470490-7470529	17p13.1d	Homo sapiens spermidine/spermine N1-acetyltransferase family member 2 (SAT2), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: acetyl-CoA + an alkane-alpha,omega-diamine = CoA + an N-acetyldiamine [goid 4145] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]	SSAT2	SSAT2
Homo sapiens	RefSeq	XR_037307.1	ILMN_339833	LOC100130133	XR_037307.1	XR_037307.1		100130133	169217338	XR_037307.1	LOC100130133		ILMN_3231667	0005390332	I	1993	CGCAGTGAGGCGAGAGCTAGCTGGGCTTGGAGAGTCCGCTGTGAGGCCAA					PREDICTED: Homo sapiens misc_RNA (LOC100130133), miscRNA.					
Homo sapiens	Unigene	Hs.541834	ILMN_105959	HS.541834	Hs.541834		Hs.541834		5396440	AI809874			ILMN_1836827	0006840161	S	352	GATGTGTGCCTGGGTCACCAATACCAGAACAGGGGATGTGGGCAGAAGGC	2	-	112128951-112129000		wf59c08.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2359886 3, mRNA sequence					
Homo sapiens	RefSeq	XM_939448.1	ILMN_35104	LOC650363	XM_939448.1	XM_939448.1		650363	89037193	XM_939448.1	LOC650363	XP_944541.1	ILMN_1684485	0006480021	S	985	GATTCTAACAACTCACAGGCGACCCAGGGCCACCAGAAGGAGCAGCCCCA				13q34d	PREDICTED: Homo sapiens hypothetical protein LOC650363 (LOC650363), mRNA.					
Homo sapiens	RefSeq	NR_002198.1	ILMN_15641	FAM10A7	NR_002198.2	NR_002198.2		155019	95006999	NR_002198.2	FAM10A7		ILMN_1765633	0005810364	S	127	TCTTCACAAAGGCCTGAAGCTCGTTCACTTTGCGGGGGTCCATGGTAGGG	7	-	132505720-132505769	7q33a	Homo sapiens family with sequence similarity 10, member A7 (pseudogene) (FAM10A7), non-coding RNA.				FAM10A7P	
Homo sapiens	RefSeq	NR_002198.2	ILMN_15641	FAM10A7	NR_002198.2	NR_002198.2		155019	95006999	NR_002198.2	FAM10A7		ILMN_2080158	0000670551	S	1712	AACTGGGACCACCCATATTTCAGTAGGACCTGGGTAGGGATTGGAAGTAC	7	-	132504135-132504184	7q33a	Homo sapiens family with sequence similarity 10, member A7 (pseudogene) (FAM10A7), non-coding RNA.				FAM10A7P	
Homo sapiens	RefSeq	XM_939026.1	ILMN_31750	LOC649946	XM_939026.1	XM_939026.1		649946	89035190	XM_939026.1	LOC649946	XP_944119.1	ILMN_1673317	0002710193	S	72	GCTCTATGACACTGATGTGGCCAAGGCTTCTCCCTATTCCCCACAGATCT				11q23.3e	PREDICTED: Homo sapiens similar to 60S ribosomal protein L23a (LOC649946), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Homo sapiens	RefSeq	NM_014344.2	ILMN_29566	FJX1	NM_014344.2	NM_014344.2		24147	18765710	NM_014344.2	FJX1	NP_055159.2	ILMN_1746465	0006270437	S	2017	CTCTGGGGAGCCCTGCAGACCTTGACAATTTGCCTGACTCATTCCTGACC	11	+	35598647-35598696	11p13a	Homo sapiens four jointed box 1 (Drosophila) (FJX1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ25593; FLJ22416	FLJ25593; FLJ22416
Homo sapiens	RefSeq	NM_173542.2	ILMN_30281	P76	NM_173542.2	NM_173542.2		196463	37059775	NM_173542.2	P76	NP_775813.1	ILMN_1734184	0004640608	S	2379	GGCCATCTGTGGCTGGAGGGTTCTGAATGTCCTCTCTCCATGTCAGGCAG	12	+	112311395-112311444	12q24.13b	Homo sapiens mannose-6-phosphate protein p76 (P76), mRNA.					
Homo sapiens	Unigene	Hs.555244	ILMN_112230	HS.555244	Hs.555244		Hs.555244		18266901	BC015720			ILMN_1838166	0002480500	S	2403	CGGAACAGGGCTCCTCCACCAGATATAAATCACAAGGCAAAGGGCAACTG	8	-	49503685-49503734		Homo sapiens, clone IMAGE:3909165, mRNA					
Homo sapiens	RefSeq	NM_024600.1	ILMN_25974	C16ORF30	NM_024600.2	NM_024600.2		79652	112807181	NM_024600.2	C16orf30	NP_078876.2	ILMN_1751559	0000160070	S	1512	TCCAGCTTTCCTGGTTAGCGCAACGCGGCTCCACGACCACACGCACTTCA				16p13.3e	Homo sapiens chromosome 16 open reading frame 30 (C16orf30), mRNA.				FLJ20898; MGC111564; CLP24	FLJ20898; CLP24
Homo sapiens	RefSeq	XM_942958.1	ILMN_30638	LOC642236	XM_942958.1	XM_942958.1		642236	88957306	XM_942958.1	LOC642236	XP_948051.1	ILMN_1793148	0000870010	I	11571	CTGAGGCACGTACAGCATGAAGTTCACTAAGTGCTTGCAACATAACCAGC				9q12h	PREDICTED: Homo sapiens similar to FRG1 protein (FSHD region gene 1 protein), transcript variant 2 (LOC642236), mRNA.					
Homo sapiens	RefSeq	NM_001007593.1	ILMN_8257	SMPD1	NM_001007593.1	NM_001007593.1		6609	56117841	NM_001007593.1	SMPD1	NP_001007594.1	ILMN_1757370	0001500193	A	2081	CTCCTTTCCTGGAGCTGGTTTAGCTGGATATGGGAGGGGGTTTGGCTGCC	11	+	6372556-6372605	11p15.4c	Homo sapiens sphingomyelin phosphodiesterase 1, acid lysosomal (SMPD1), transcript variant ASM-2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 1740330] [evidence NAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 1740330] [evidence NAS]; The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 1740330] [evidence NAS]; The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine [goid 6684] [pmid 1740330] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7670466] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 7670466] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [pmid 1740330] [evidence NAS]; Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [pmid 1718266] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	ASM; NPD	ASM; NPD
Homo sapiens	RefSeq	NM_152829.1	ILMN_14919	TES	NM_152829.1	NM_152829.1		26136	23238187	NM_152829.1	TES	NP_690042.1	ILMN_2311798	0006180593	A	2115	GTTAGCCAGGCTGGTCTCAAACTCCTGACCTCAGATGATCCGCCTGCCTT	7	+	115685602-115685651	7q31.2b	Homo sapiens testis derived transcript (3 LIM domains) (TES), transcript variant 2, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP586B2022; TESS-2; MGC1146; TESTIN; TESS	DKFZP586B2022; TESS-2; MGC1146; TESTIN; TESS
Homo sapiens	RefSeq	NM_152829.1	ILMN_14919	TES	NM_152829.1	NM_152829.1		26136	23238187	NM_152829.1	TES	NP_690042.1	ILMN_2311796	0000780463	A	2193	GTGGGAGCCACCATGCCTGACCCACACACTTTTTACTTGTATAGATGATT	7	+	115685680-115685729	7q31.2b	Homo sapiens testis derived transcript (3 LIM domains) (TES), transcript variant 2, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP586B2022; TESS-2; MGC1146; TESTIN; TESS	DKFZP586B2022; TESS-2; MGC1146; TESTIN; TESS
Homo sapiens	RefSeq	NR_029848.1	ILMN_388129	MIR361	NR_029848.1	NR_029848.1		494323	262206139	NR_029848.1	MIR361		ILMN_3310653	0007040010	S	13	ATCTCCAGGGGTACTTTATAATTTCAAAAAGTCCCCCAGGTGTGATTCTG				Xq21.2a	Homo sapiens microRNA 361 (MIR361), microRNA.					
Homo sapiens	RefSeq	NM_015122.1	ILMN_19679	FCHO1	NM_015122.1	NM_015122.1		23149	29789053	NM_015122.1	FCHO1	NP_055937.1	ILMN_1654571	0004120703	S	2841	GGTTACCGCATGTCGCTGGTGAAGAGGAGGTTTGCCACAGGGATGTACCT	19	+	17759616-17759655:17760093-17760102	19p13.11d	Homo sapiens FCH domain only 1 (FCHO1), mRNA.				KIAA0290	KIAA0290
Homo sapiens	RefSeq	NR_024402.1	ILMN_371689	MGC23284	NR_024402.1	NR_024402.1		197187	212276003	NR_024402.1	MGC23284		ILMN_3233763	0003930369	I	2114	AGAAACCGTGGTTGGAGCTCTTGCCTTTTTCCAGGCCGGTGGAGACCCTC	16	+	88741598-88741647		Homo sapiens hypothetical LOC197187 (MGC23284), transcript variant 1, non-coding RNA.					
Homo sapiens	RefSeq	XM_936412.1	ILMN_32129	UBXD7	XM_936412.1	XM_936412.1		26043	88971801	XM_936412.1	UBXD7	XP_941505.1	ILMN_1733116	0002030328	I	66	CACACCGCACGGCGAAGTGGGGGAGGGCAGTCCGTGTGTGTCTGTGTTGT				3q29f-q29g	PREDICTED: Homo sapiens UBX domain containing 7, transcript variant 4 (UBXD7), mRNA.					
Homo sapiens	RefSeq	XM_937424.1	ILMN_39200	LOC653978	XM_937424.1	XM_937424.1		653978	89065688	XM_937424.1	LOC653978	XP_942517.1	ILMN_2186516	0002490767	S	413	GTGAGTGTGGCCCTGTTGGTGGGATCCACATGCAATGCCTTCAATTATGG					PREDICTED: Homo sapiens similar to tripartite motif protein 11 (LOC653978), mRNA.					
Homo sapiens	RefSeq	NM_001508.1	ILMN_25858	GPR39	NM_001508.2	NM_001508.2		2863	126352498	NM_001508.2	GPR39	NP_001499.1	ILMN_1688768	0001710307	S	1271	AAGTCCGAGAGCGAAGAGAGCAGGACCGCCAGGAGGCAGACCATCATCTT	2	+	132891887-132891936	2q21.2b	Homo sapiens G protein-coupled receptor 39 (GPR39), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9441746] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9441746] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC149541	
Homo sapiens	RefSeq	NM_002598.2	ILMN_166385	LOC728739	XR_015689.1	XR_015689.1		728739	113423488	XR_015689.1	LOC728739		ILMN_1686401	0006350048	A	364	GCAGCAAGGAGCATCAGACCCTAGACTGGAGATTGGGACATAAGCAGGCT	12	-	106821324-106821373	12q23.3d	PREDICTED: Homo sapiens similar to programmed cell death 2 isoform 2 (LOC728739), mRNA.					RP8; MGC12347; ZMYND7
Homo sapiens	RefSeq	XM_001718442.1	ILMN_342229	LOC100132386	XM_001718442.1	XM_001718442.1		100132386	169210947	XM_001718442.1	LOC100132386	XP_001718494.1	ILMN_3241431	0006100148	S	1	ATGATTAAGTTTTCCACGAGGGCTGCGGCCAAGACCTCTGTCAGGAGACC	17	+	36515009-36515028:36515206-36515235	17q21.2a	PREDICTED: Homo sapiens hypothetical protein LOC100132386 (LOC100132386), mRNA.					
Homo sapiens	Unigene	Hs.557952	ILMN_113053	HS.557952	Hs.557952		Hs.557952		34322751	AU254038			ILMN_1889602	0007560390	S	615	TCCTCGCCCCTCAAGAGTTGTGTGGCTCTGGGCAGTTTCCTTTGGCTGTA	7	+	138901619-138901630:138901632-138901649:138901651-138901654:138901656-138901671		AU254038 human unfavorable neuroblastoma cDNA Homo sapiens cDNA clone Nbla12167 3, mRNA sequence					
Homo sapiens	RefSeq	XM_930110.1	ILMN_138530	LOC644083	XM_930110.1	XM_930110.1		644083	88942508	XM_930110.1	LOC644083	XP_935203.1	ILMN_1677002	0004070156	S	688	ATGGGGCATGGGCCACAGCTCCCTGGTCTCTGCAATGGATGGTTCTCTGA	1	+	19598653-19598702	1p36.13b	PREDICTED: Homo sapiens hypothetical protein LOC644083 (LOC644083), mRNA.					
Homo sapiens	RefSeq	NM_004033.2	ILMN_3910	ANXA6	NM_004033.2	NM_004033.2		309	71773414	NM_004033.2	ANXA6	NP_004024.2	ILMN_2326591	0000450671	A	2612	CCATCCATTTCACCACCCATCTCCATCCAGGCCGCGCTAGAGTACTGGAC	5	-	150490994-150491043	5q33.1d	Homo sapiens annexin A6 (ANXA6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15576473] [evidence IPI]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium [goid 5544] [evidence IEA]	ANX6; CBP68	ANX6; CBP68
Homo sapiens	RefSeq	XM_939752.1	ILMN_41159	LOC441996	XM_929617.1	XM_929617.1		441996	89058968	XM_929617.1	LOC441996	XP_934710.1	ILMN_1813284	0002680356	A	253	ATGGGCCACAATGACACGAACCCCGAGACCCATGCCTTCATCACATCCCC	22	-	33315797-33315846	22q12.3c	PREDICTED: Homo sapiens similar to aconitase 2, mitochondrial (LOC441996), mRNA.					
Homo sapiens	RefSeq	NM_012157.2	ILMN_173181	FBXL2	NM_012157.2	NM_012157.2		25827	16306581	NM_012157.2	FBXL2	NP_036289.2	ILMN_1688639	0003850187	S	2014	GCTCGGAGTCTGTGTTGCCTGATTGGAAAGTAGAAGCTCTGGTGTATGCT	3	+	33402509-33402558	3p22.3c	Homo sapiens F-box and leucine-rich repeat protein 2 (FBXL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10508920] [evidence TAS]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10531035] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531037] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10508920] [evidence TAS]	FBL2; FBL3; DKFZP564P0622	FBL2; FBL3; DKFZP564P0622
Homo sapiens	RefSeq	NM_016122.2	ILMN_18188	CCDC41	NM_016122.2	NM_016122.2		51134	109134354	NM_016122.2	CCDC41	NP_057206.2	ILMN_2406716	0005050465	A	2789	GCCAAAACACTTGAATGTGCCTCAAGAAAAGGTACCTACTACATGCTGTA	12	-	94702442-94702491	12q22c	Homo sapiens coiled-coil domain containing 41 (CCDC41), transcript variant 1, mRNA.				NY-REN-58; MGC149726	NY-REN-58
Homo sapiens	RefSeq	NM_016122.1	ILMN_18188	CCDC41	NM_016122.2	NM_016122.2		51134	109134354	NM_016122.2	CCDC41	NP_057206.2	ILMN_1799113	0007050471	S	3036	CTTCATCTTTGAGATGCTTGGCCATAACAGGGTCCATACACATCTTCTGG	12	-	94702195-94702244	12q22c	Homo sapiens coiled-coil domain containing 41 (CCDC41), transcript variant 1, mRNA.				NY-REN-58; MGC149726	NY-REN-58
Homo sapiens	RefSeq	NM_006473.2	ILMN_21936	TAF6L	NM_006473.2	NM_006473.2		10629	21269867	NM_006473.2	TAF6L	NP_006464.1	ILMN_1727281	0007650025	S	1939	TCTCGGACTACTCGCTGTACTTGCCGCTCTGAGTCAGTGGCCCCTTCGTT	11	+	62311313-62311344:62311345-62311362	11q12.3b	Homo sapiens TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa (TAF6L), mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 9674425] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 9674425] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9674425] [evidence TAS]; Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51090] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9674425] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9674425] [evidence IPI];  [goid 16986] [evidence IEA]	MGC4288; PAF65A; FLJ11136	MGC4288; PAF65A; FLJ11136
Homo sapiens	RefSeq	XR_001023.1	ILMN_139000	IL8RBP	XR_001023.1	XR_001023.1		3580	88953943	XR_001023.1	IL8RBP		ILMN_1691507	0006420707	A	1300	AAGGTGTCCACAAAGGTGCAGAGAAAGTGGAATTCTCGGGCATCGTGAGC	2	-	218632904-218632953	2q35d	PREDICTED: Homo sapiens interleukin 8 receptor, beta pseudogene (IL8RBP), misc RNA.					
Homo sapiens	RefSeq	NM_178448.3	ILMN_365856	C9ORF140	NM_178448.3	NM_178448.3		89958	190886453	NM_178448.3	C9orf140	NP_848543.2	ILMN_3251592	0001010538	S	3443	GGCAGAAGTGTCCCCAGTTGAGAATCTGCCCCAGAGGAACACACCCACAC	9	-	139956919-139956968	9q34.3e	Homo sapiens chromosome 9 open reading frame 140 (C9orf140), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	XM_068632.5	ILMN_31373	LOC133993	XM_068632.5	XM_068632.5		133993	88983572	XM_068632.5	LOC133993	XP_068632.2	ILMN_1681631	0003420709	I	130	GTCAAACTTGTCAGTGTCCTAATCCCAGAGAAAGAGCAGAAGCCTAAAGG	5	+	64025670-64025719		PREDICTED: Homo sapiens hypothetical LOC133993, transcript variant 1 (LOC133993), mRNA.					
Homo sapiens	RefSeq	XM_934724.1	ILMN_165015	LOC729647	XR_015976.1	XR_015976.1		729647	113422474	XR_015976.1	LOC729647		ILMN_1743673	0004200356	A	2142	CTCCAACTTGACATCACGCTTTCTGTCCCACTTTCCCACACTTCGTGCCC	11	-	67316041-67316090	11q13.2a	PREDICTED: Homo sapiens similar to CG7889-PA (LOC729647), mRNA.					
Homo sapiens	RefSeq	NM_152251.2	ILMN_28733	DEFB106A	NM_152251.3	NM_152251.3		245909	103485144	NM_152251.3	DEFB106A	NP_689464.1	ILMN_1736056	0000830368	S	260	GCCTCTGCTGTAGGCAGACACTTTAATAAAAATAAATGACTGTCAAAAAA	8	+	7686532-7686575:7720104-7720108:7720109-7720109	8p23.1e	Homo sapiens defensin, beta 106A (DEFB106A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence NAS]		MGC133011; MGC118939; DEFB106; MGC118941; MGC133012; MGC118940; DEFB-6; BD-6; MGC118938	MGC118939; DEFB106; MGC118941; MGC118940; DEFB-6; BD-6; MGC118938
Homo sapiens	RefSeq	XM_938930.1	ILMN_33282	LOC649858	XM_938930.1	XM_938930.1		649858	89060814	XM_938930.1	LOC649858	XP_944023.1	ILMN_1655909	0002470754	S	61	ATGGACCTAGCCCTCCACCCCAAAGAGCAGGCCACAGCAGCTGGACAAAG					PREDICTED: Homo sapiens hypothetical protein LOC649858 (LOC649858), mRNA.					
Homo sapiens	RefSeq	NM_033423.2	ILMN_166148	GZMH	NM_033423.3	NM_033423.3		2999	141801761	NM_033423.3	GZMH	NP_219491.1	ILMN_1731233	0002370010	S	774	GAAGCGCCTCTAACAGCAGGCATGAGACTAACCTTCCTCTGGGCCTGACC	14	-	25075771-25075808:25075809-25075820	14q12a	Homo sapiens granzyme H (cathepsin G-like 2, protein h-CCPX) (GZMH), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 2402757] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 2193684] [evidence NAS]; The rupture of cell membranes and the loss of cytoplasm [goid 19835] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2402757] [evidence NAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2193684] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	CTSGL2; CCP-X; CGL-2; CTLA1; CSP-C	CTSGL2; CCP-X; CGL-2; CTLA1; CSP-C
Homo sapiens	RefSeq	NM_015231.1	ILMN_162223	NUP160	NM_015231.1	NM_015231.1		23279	54859721	NM_015231.1	NUP160	NP_056046.1	ILMN_1652989	0005050670	S	4723	TAGCTGAGGGTTGTTGGCTTGTTGTAGCTGACCACCAAAAGCAGTCACTG	11	-	47813491-47813540	11p11.2a	Homo sapiens nucleoporin 160kDa (NUP160), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 12228227] [evidence EXP]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 11564755] [evidence IDA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 11684705] [evidence IDA]	The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 11684705] [evidence IDA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [pmid 11684705] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	MGC150679; MGC150678	MGC150679; MGC150678
Homo sapiens	RefSeq	NM_020884.1	ILMN_171319	MYH7B	NM_020884.2	NM_020884.2		57644	114842388	NM_020884.2	MYH7B	NP_065935.2	ILMN_1784427	0004010132	S	6037	AGGAGTGACGGCCTGACCCCCTGGGCTCTAAAGAGGAATGTCTGCTGTTG	20	+	33053645-33053652:33053653-33053694	20q11.22b	Homo sapiens myosin, heavy chain 7B, cardiac muscle, beta (MYH7B), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC96928; MGC96940; MYH14; MHC14	MGC96928; MGC96940; MYH14
Homo sapiens	RefSeq	XR_015204.1	ILMN_177527	LOC729930	XR_015204.1	XR_015204.1		729930	113412235	XR_015204.1	LOC729930		ILMN_3297885	0005870358	M	977	TCTCAGCCTATCCAGATAGCATGCTCTGGACACAGTGACAAGGGGGTGGC				1p22.2c	PREDICTED: Homo sapiens misc_RNA (LOC729930), miscRNA.					
Homo sapiens	RefSeq	XR_039863.1	ILMN_335427	LOC283332	XR_039863.1	XR_039863.1		283332	169204078	XR_039863.1	LOC283332		ILMN_3199608	0000070020	A	166	GGTGTGGGGAGCAGGGGAGGTGAGACAGAGATGAGGAGGGACAGAAATGT	12	-	48590909-48590958	12q13.13a	PREDICTED: Homo sapiens misc_RNA (LOC283332), miscRNA.					
Homo sapiens	RefSeq	XM_001717703.1	ILMN_348157	POM121L2	XM_001717703.1	XM_001717703.1		94026	169169600	XM_001717703.1	POM121L2	XP_001717755.1	ILMN_3304257	0003060427	M	3297	CAGTGTTGGCTTTGGGATGCCTTTTCCACCTGCCCAGGGCTCTGTTGGGA	6	-	27384930-27384979	6p22.1c	PREDICTED: Homo sapiens POM121 membrane glycoprotein-like 2 (rat) (POM121L2), mRNA.					
Homo sapiens	RefSeq	NM_014915.1	ILMN_11702	ANKRD26	NM_014915.2	NM_014915.2		22852	154354989	NM_014915.2	ANKRD26	NP_055730.2	ILMN_1740161	0005560189	S	4959	CTTTGTTCACCACTCTCACTACCAGGCCAGTCATGGAGCCACCTTGTGTG	10	-	27363797-27363846	10p12.1a	Homo sapiens ankyrin repeat domain 26 (ANKRD26), mRNA.				MGC163325; bA145E8.1	MGC163325; bA145E8.1
Homo sapiens	RefSeq	XM_943021.1	ILMN_45730	LOC646098	XM_933399.2	XM_933399.2		646098	113428303	XM_933399.2	LOC646098	XP_938492.1	ILMN_1690158	0004070707	S	181	TTGTTCACCATCCTGACCTCCATCTATTTCTTCAACAAGGCTCAGCAGTG	19	-	55980881-55980892:55981011-55981048	19q13.33c	PREDICTED: Homo sapiens hypothetical LOC646098 (LOC646098), mRNA.					
Homo sapiens	RefSeq	NM_016327.2	ILMN_9777	UPB1	NM_016327.2	NM_016327.2		51733	56550123	NM_016327.2	UPB1	NP_057411.1	ILMN_1678690	0003830735	S	1915	GAAATTCTGCCTGAGGACAGCAGCCCAGTGCTTGGCGAGAGTTCCTGACA	22	+	23252401-23252450	22q11.23b	Homo sapiens ureidopropionase, beta (UPB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15385443] [evidence EXP]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3 [goid 3837] [pmid 15385443] [evidence EXP]; Catalysis of the reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3 [goid 3837] [pmid 10542323] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BUP1	BUP1
Homo sapiens	RefSeq	XM_001714789.1	ILMN_346809	LOC100132703	XM_001714789.1	XM_001714789.1		100132703	169208459	XM_001714789.1	LOC100132703	XP_001714841.1	ILMN_3245046	0003450441	S	224	GGGGCTGGCTCAAGGTTACACAGTGAGTGTGGGGGCAGAGGCGGGCCCAC	15	-	80943757-80943806	15q25.2a	PREDICTED: Homo sapiens similar to colon cancer-associated antigen AgSK1-2HT-ECS (LOC100132703), mRNA.					
Homo sapiens	RefSeq	NM_006705.2	ILMN_4884	GADD45G	NM_006705.2	NM_006705.2		10912	9790905	NM_006705.2	GADD45G	NP_006696.1	ILMN_1651498	0005570114	S	923	GCCCTGGACTTGGTACAGTTTCAGGAGCGTGAAGGACTTAACCGACTGCC	9	+	91411148-91411197	9q22.2a	Homo sapiens growth arrest and DNA-damage-inducible, gamma (GADD45G), mRNA.		Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase [goid 185] [pmid 9827804] [evidence TAS]; The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9827804] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9827804] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]	DDIT2; CR6; GADD45gamma; GRP17	DDIT2; CR6; GADD45gamma; GRP17
Homo sapiens	RefSeq	NM_001004333.3	ILMN_22687	RNASEK	NM_001004333.3	NM_001004333.3		440400	157151724	NM_001004333.3	RNASEK	NP_001004333.1	ILMN_3241136	0002470484	S	457	CTGCCAAGTTCGGCTCAATAAGCGCAAGGAATACATGGTGCGCTAGGGCC	17	+	6858284-6858329:6858330-6858333	17p13.1d	Homo sapiens ribonuclease, RNase K (RNASEK), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [pmid 17881363] [evidence IDA]	Catalysis of the hydrolysis of ester linkages within ribonucleic acid by creating internal breaks [goid 4521] [pmid 17881363] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC71993	
Homo sapiens	RefSeq	NM_030643.3	ILMN_27521	APOL4	NM_030643.3	NM_030643.3		80832	22035655	NM_030643.3	APOL4	NP_085146.2	ILMN_1779070	0003400142	I	348	CAGTCAGTATCCAGCCTCAACATTCAGCAGAGGCCCCAGATCAGCGTCTG	22	-	36597806-36597855	22q12.3d	Homo sapiens apolipoprotein L, 4 (APOL4), transcript variant a, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 11944986] [evidence NAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	APOL-IV; APOLIV	APOL-IV; APOLIV
Homo sapiens	RefSeq	XR_040603.1	ILMN_342970	LOC440839	XR_040603.1	XR_040603.1		440839	169176338	XR_040603.1	LOC440839		ILMN_3242043	0005390047	S	861	TGCTCATTGACAACACACCTGATCACCCAAGAGCTGTGATGGAGATGTAC	9	-	70056752-70056801	9q13a	PREDICTED: Homo sapiens misc_RNA (LOC440839), miscRNA.					
Homo sapiens	RefSeq	XM_936098.1	ILMN_161916	ZFP57	XM_294093.6	XM_294093.6		346171	113417446	XM_294093.6	ZFP57	XP_294093.4	ILMN_1679389	0005670646	S	7	GGAGACCCTGTGCCCCTAAATCGCGGTCCACTGCGCGCGTCAGGTTTCTA	6	-	29753115-29753122:29756818-29756859	6p22.1a	PREDICTED: Homo sapiens zinc finger protein 57 homolog (mouse) (ZFP57), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	XM_001128973.1	ILMN_165013	LOC728449	XM_001128973.1	XM_001128973.1		728449	113421470	XM_001128973.1	LOC728449	XP_001128973.1	ILMN_3241919	0003170154	S	434	CAGACAGATCTTGGACGAGGTCGCGTCCCCCCTCGTGACCAGCAAACTCC	10	+	47239411-47239460	10q11.22b	PREDICTED: Homo sapiens hypothetical protein LOC728449 (LOC728449), mRNA.					
Homo sapiens	Unigene	Hs.566864	ILMN_119109	HS.566864	Hs.566864		Hs.566864		20357301	BQ181809			ILMN_1853708	0001230372	S	580	CAGCTACCTGTCAAAGGACTGGAGGTGAGAAATGGGGAGCTGCAATTCTG					UI-H-EU0-azv-i-08-0-UI.s1 NCI_CGAP_Car1 Homo sapiens cDNA clone IMAGE: 5854159 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001694.2	ILMN_169171	ATP6V0C	XM_001130742.1	XM_001130742.1		527	113426287	XM_001130742.1	ATP6V0C	XP_001130742.1	ILMN_1773849	0002360138	A	463	CTCATCCTCTCCACAAAGTAGACCCTCTCCGAGCCCACCAGCCACAGAAT				16p13.3d	PREDICTED: Homo sapiens ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c (ATP6V0C), mRNA.	A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1709739] [evidence TAS]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 1709739] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11543633] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [pmid 1709739] [evidence TAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [pmid 1709739] [evidence TAS]		VATL; Vma3; ATPL; ATP6C; ATP6L
Homo sapiens	RefSeq	XM_939787.1	ILMN_169171	ATP6V0C	XM_001130742.1	XM_001130742.1		527	113426287	XM_001130742.1	ATP6V0C	XP_001130742.1	ILMN_1789005	0003610397	A	905	CCGGGCCCGTGGCCCTGCGCGGAGCTGTGTCCAATAAAGTTCTTGGATGT				16p13.3d	PREDICTED: Homo sapiens ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c (ATP6V0C), mRNA.	A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1709739] [evidence TAS]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 1709739] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11543633] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [pmid 1709739] [evidence TAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [pmid 1709739] [evidence TAS]		
Homo sapiens	RefSeq	XM_939787.1	ILMN_169171	ATP6V0C	XM_001130742.1	XM_001130742.1		527	113426287	XM_001130742.1	ATP6V0C	XP_001130742.1	ILMN_1653056	0000630291	I	26	TACACCTCGGGGTCCTAGTCTCAACTGGCCTGCGTACTGCTGTGGGCTCA				16p13.3d	PREDICTED: Homo sapiens ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c (ATP6V0C), mRNA.	A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1709739] [evidence TAS]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 1709739] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11543633] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [pmid 1709739] [evidence TAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [pmid 1709739] [evidence TAS]		
Homo sapiens	RefSeq	NM_005106.2	ILMN_44041	DLEC1	NM_007335.2	NM_007335.2		9940	90669193	NM_007335.2	DLEC1	NP_031361.2	ILMN_1690278	0005390131	A	5353	AGCAGCTCTTCAGCACAAAGACACAGACTTGGGGACCTGGGGACCTCTGG	3	+	38129859-38129879:38130837-38130865	3p22.2a	Homo sapiens deleted in lung and esophageal cancer 1 (DLEC1), transcript variant DLEC1-N1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10213508] [evidence IDA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10213508] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DLC1; F56	DLC1; F56
Homo sapiens	Unigene	Hs.147198	ILMN_78451	HS.147198	Hs.147198		Hs.147198		3745137	AI193928			ILMN_1900159	0001580328	S	104	CCTCGGCCTAGTTTCCAGTGTATGTTTTCCAGACGGGTTCCATTCAGCTC	1	+	206866802-206866851		qe73c09.x1 Soares_fetal_lung_NbHL19W Homo sapiens cDNA clone IMAGE:1744624 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001004742.1	ILMN_180485	OR5M3	NM_001004742.1	NM_001004742.1		219482	52317133	NM_001004742.1	OR5M3	NP_001004742.1	ILMN_1696355	0001170040	S	784	ACAGAGGAGTCTGTGGAGCAGGGGAAGATGGTGGCTGTGTTCTATACCAC	11	-	56237140-56237189	11q11c	Homo sapiens olfactory receptor, family 5, subfamily M, member 3 (OR5M3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-191	OR11-191
Homo sapiens	RefSeq	NM_001010977.1	ILMN_22775	C13ORF39	NM_001010977.1	NM_001010977.1		196541	58293778	NM_001010977.1	C13orf39	NP_001010977.1	ILMN_1709319	0004900066	S	643	TCCCAGCCAGGGACGGTGCTGCTTTGGGCAAACAAATTCAGGTTCAGCAC	13	-	103338489-103338538	13q33.1b	Homo sapiens chromosome 13 open reading frame 39 (C13orf39), mRNA.					
Homo sapiens	RefSeq	NM_005476.3	ILMN_29772	GNE	NM_005476.3	NM_005476.3		10020	38788307	NM_005476.3	GNE	NP_005467.1	ILMN_1729417	0006060209	S	3459	CTGGGAAGGGACATCTGTTCTTTGGTGTAATCTCTCATGGTGAAATCTGC	9	-	36204674-36204723	9p13.3a	Homo sapiens glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase (GNE), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9305888] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6047] [evidence IEA]; The chemical reactions and pathways involving N-acetylneuraminate, the anion of 5-(acetylamino)-3,5-dideoxy-D-glycero-D-galacto-non-3-ulosonic acid [goid 6054] [pmid 9305888] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10334995] [evidence TAS]; The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [evidence IEA]; The chemical reactions and pathways involving UDP-N-acetylglucosamine, a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 6047] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria [goid 9103] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine [goid 8761] [pmid 10330343] [evidence TAS]; Catalysis of the reaction: ATP + N-acyl-D-mannosamine = ADP + N-acyl-D-mannosamine 6-phosphate [goid 9384] [pmid 9305888] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine [goid 8761] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	NM; IBM2; Uae1; DMRV; GLCNE	GLCNE; NM; IBM2; Uae1; DMRV
Homo sapiens	RefSeq	NM_000958.2	ILMN_182623	PTGER4	NM_000958.2	NM_000958.2		5734	38505196	NM_000958.2	PTGER4	NP_000949.1	ILMN_1795930	0002940438	S	3191	GGGGCACTTAATGGTCACCTTGTAACAGTTTTGTGTAACTCCCAGTGATG	5	+	40693612-40693661	5p13.1b	Homo sapiens prostaglandin E receptor 4 (subtype EP4) (PTGER4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8163486] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8862514] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 8163486] [evidence TAS]; Any process that modulates the frequency, rate or extent of bone formation [goid 30278] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 8163486] [evidence TAS]	EP4R; MGC126583; EP4	EP4R; MGC126583; EP4
Homo sapiens	RefSeq	NM_173688.1	ILMN_11490	NKAIN3	NM_173688.2	NM_173688.2		286183	145208007	NM_173688.2	NKAIN3	NP_775959.1	ILMN_1723674	0002640204	S	1430	GAGATCATGGTGCCCTACCTTCAATAGGGTGGCCAGAAAACACCTCTCTG	8	+	63902889-63902938	8q12.3a-q12.3b	Homo sapiens Na+/K+ transporting ATPase interacting 3 (NKAIN3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ39630; FAM77D	FLJ39630
Homo sapiens	RefSeq	XR_039102.1	ILMN_340219	LOC100130549	XR_039102.1	XR_039102.1		100130549	169162974	XR_039102.1	LOC100130549		ILMN_3259164	0004260181	M	1697	CGTTTATTCACTAAAGTAGCTGGCACAAAACACACCAAAACCTAGAGTGG	2	-	128991461-128991510	2q14.3e	PREDICTED: Homo sapiens misc_RNA (LOC100130549), miscRNA.					
Homo sapiens	RefSeq	XM_942712.3	ILMN_35565	MGC87895	XM_942712.3	XM_942712.3		644068	169162110	XM_942712.3	MGC87895	XP_947805.1	ILMN_3225761	0002320291	A	461	GAAGGCAGACCGAGATGAATCCTCGCCATATGCTGCTATGTTGACCACCC				1p36.13a	PREDICTED: Homo sapiens similar to ribosomal protein S14 (MGC87895), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Homo sapiens	RefSeq	XM_942712.3	ILMN_35565	MGC87895	XM_942712.3	XM_942712.3		644068	169162110	XM_942712.3	MGC87895	XP_947805.1	ILMN_3302356	0000780576	M	222	ACTATAAAACCTATAAGAGCTTTCCCGTGTGGAGTCTGGAGACGACGTGC				1p36.13a	PREDICTED: Homo sapiens similar to ribosomal protein S14 (MGC87895), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Homo sapiens	RefSeq	NM_015428.1	ILMN_167040	ZNF473	NM_015428.1	NM_015428.1		25888	54792147	NM_015428.1	ZNF473	NP_056243.1	ILMN_2346649	0003360735	A	4446	AACTTCTCGCACATGGTTCCCGTCCTCTGGAGCTCTGTCTTGTCGGGGAG	19	+	50551787-50551836	19q13.33b	Homo sapiens zinc finger protein 473 (ZNF473), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HZFP100; ZN473	HZFP100; ZN473
Homo sapiens	RefSeq	XM_926433.1	ILMN_35237	LOC643062	XM_926433.1	XM_926433.1		643062	89061327	XM_926433.1	LOC643062	XP_931526.1	ILMN_1735758	0005820576	S	1176	GTTCCTGGGCCTGTGCACTCTGGGCTTTTCTGGCTTTGCCTGCCCAGCTA	Y	+	12051520-12051542:12051917-12051943		PREDICTED: Homo sapiens similar to N-acetylated-alpha-linked acidic dipeptidase II (NAALADase II) (LOC643062), mRNA.					
Homo sapiens	RefSeq	NM_003596.2	ILMN_174128	TPST1	NM_003596.2	NM_003596.2		8460	21361092	NM_003596.2	TPST1	NP_003587.1	ILMN_1651950	0004760747	S	1652	GCTCTTGATCCCGATTTCATGCACAGCCCTGCAGTAAGGAGCCCAGAAGG	7	+	65162582-65162631	7q11.21e	Homo sapiens tyrosylprotein sulfotransferase 1 (TPST1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9501187] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational sulfation of peptidyl-tyrosine residues to form peptidyl-O4'-sulfo-L-tyrosine [goid 6478] [pmid 9733778] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9501187] [evidence TAS]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + protein tyrosine = adenosine 3',5'-bisphosphate + protein tyrosine-O-sulfate [goid 8476] [pmid 9733778] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_000064.1	ILMN_5682	C3	NM_000064.1	NM_000064.1		718	4557384	NM_000064.1	C3	NP_000055.1	ILMN_1762260	0004860494	S	3824	GGCTCAATGAACAGAGATACTACGGTGGTGGCTATGGCTCTACCCAGGCC	19	-	6636154-6636157:6637135-6637180	19p13.3a	Homo sapiens complement component 3 (C3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 279011] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 15199963] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12878586] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3052276] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 6912277] [evidence EXP]	Any process that activates or increases the frequency, rate or extent of type IIa hypersensitivity, a type of inflammatory response [goid 1798] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [evidence IEA]; Any process involved in the activation of any of the steps of the alternative pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 6957] [pmid 162484] [evidence EXP]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10085065] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9164946] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IEA]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9164946] [evidence TAS]	ASP; CPAMD1	ASP; CPAMD1
Homo sapiens	RefSeq	XM_933681.1	ILMN_39107	LOC644086	XM_933681.1	XM_933681.1		644086	89024713	XM_933681.1	LOC644086	XP_938774.1	ILMN_1759550	0004010747	I	188	CCTGGCCAGTTCTCCCCTACCTGATCAACCAGTAGCATAATCAGATTTGC	7	+	29132608-29132657		PREDICTED: Homo sapiens hypothetical protein LOC644086, transcript variant 2 (LOC644086), mRNA.					
Homo sapiens	RefSeq	NM_139208.1	ILMN_14199	MASP2	NM_139208.1	NM_139208.1		10747	21264360	NM_139208.1	MASP2	NP_631947.1	ILMN_1727723	0002640400	I	653	GCTGAGATGGCTGTGCCCCAACTCCCATTCACCCACCATGGACCCAATAA	1	-	11104873-11104922	1p36.22b	Homo sapiens mannan-binding lectin serine peptidase 2 (MASP2), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10639434] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10925294] [evidence EXP]	Any process involved in the activation of any of the steps of the lectin pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 1867] [pmid 11532276] [evidence EXP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 9087411] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	sMAP; MASP-2; MAP19	sMAP; MASP-2; MAP19
Homo sapiens	RefSeq	XM_372248.3	ILMN_30876	LOC389888	XM_372248.3	XM_372248.3		389888	89060236	XM_372248.3	LOC389888	XP_372248.3	ILMN_1654279	0002650551	S	192	TTGGATTGCATCTGAATGCAGAACTTTGGTCGTCCAGTACCCAGATGTTT	X	+	134170360-134170409		PREDICTED: Homo sapiens similar to Protein CXorf48 (Tumor antigen BJ-HCC-20) (LOC389888), mRNA.					
Homo sapiens	RefSeq	NM_001013623.2	ILMN_363808	C6ORF94	NM_001013623.2	NM_001013623.2		153918	193211441	NM_001013623.2	C6orf94	NP_001013645.1	ILMN_3235761	0006370451	S	181	CAGCAGATGTTCTGGAAAGGCATGGACCAATATGTAAGAAACTCTTCAAC	6	+	144205489-144205502:144207169-144207204	6q24.2b	Homo sapiens chromosome 6 open reading frame 94 (C6orf94), mRNA.					
Homo sapiens	RefSeq	NR_030160.1	ILMN_387789	MIR485	NR_030160.1	NR_030160.1		574436	262205139	NR_030160.1	MIR485		ILMN_3309764	0004830753	S	13	CTGGCCGTGATGAATTCGATTCATCAAAGCGAGTCATACACGGCTCTCCT				14q32.31a	Homo sapiens microRNA 485 (MIR485), microRNA.					
Homo sapiens	RefSeq	NM_052847.1	ILMN_22105	GNG7	NM_052847.2	NM_052847.2		2788	148922844	NM_052847.2	GNG7	NP_443079.1	ILMN_1728107	0001300139	S	4021	CCGCTGCCCATCTAACCTTCGTAAAGACCTGTCTCCTGTTTCCAGCCGCC	19	-	2511453-2511502	19p13.3g	Homo sapiens guanine nucleotide binding protein (G protein), gamma 7 (GNG7), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses guanylyl cyclase activity [goid 7168] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9600093] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	FLJ00058	FLJ00058
Homo sapiens	RefSeq	XM_938948.1	ILMN_165287	STARD9	XM_001129482.1	XM_001129482.1		57519	113425228	XM_001129482.1	STARD9	XP_001129482.1	ILMN_1668732	0000670022	S	268	GAAATCTATAATGAACGGGTGCGGGATCTGTTGAAGCAATCTGGTCAAAA	15	+	40718197-40718246	15q15.2a	PREDICTED: Homo sapiens START domain containing 9 (STARD9), mRNA.	Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	XM_942911.1	ILMN_33456	LOC647634	XM_942911.1	XM_942911.1		647634	89028479	XM_942911.1	LOC647634	XP_948004.1	ILMN_1711548	0005130014	S	293	ACTCAGGGTCACAGAAGCTCAACCGTGTCCACTGGAAAGGCTCTTACTCG					PREDICTED: Homo sapiens hypothetical protein LOC647634 (LOC647634), mRNA.					
Homo sapiens	RefSeq	NM_152701.2	ILMN_19037	ABCA13	NM_152701.2	NM_152701.2		154664	31657091	NM_152701.2	ABCA13	NP_689914.2	ILMN_1704579	0001780537	S	16793	GGCCTTTTTCAACACTAACGTTGAGTACCGGTAGCTTGTGATCAAAGGCA	7	+	48657433-48657482	7p12.3b	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 13 (ABCA13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	FLJ33951; FLJ33876; FLJ16398; DKFZp313D2411	DKFZp313D2411; FLJ33951; FLJ33876; FLJ16398
Homo sapiens	RefSeq	NM_198402.2	ILMN_25407	PTPLB	NM_198402.2	NM_198402.2		201562	42476153	NM_198402.2	PTPLB	NP_940684.1	ILMN_1690806	0004560270	S	3785	GGTTTAGATGCTGGAGAGTTGAAGAGGTGTAAGAAGAGATCGTGCCCTCA	3	-	124693517-124693566	3q21.1b-q21.1c	Homo sapiens protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b (PTPLB), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15024066] [evidence IPI]		
Homo sapiens	RefSeq	XR_037203.1	ILMN_335452	LOC645251	XR_037203.1	XR_037203.1		645251	169216280	XR_037203.1	LOC645251		ILMN_3276119	0001260091	M	805	CCATCCCAGTGGAGGGGAAAGGGGATGTTTCAAGGCAACCTTTCCTGCAC				Xq11.1b	PREDICTED: Homo sapiens misc_RNA (LOC645251), miscRNA.					
Homo sapiens	RefSeq	XR_037203.1	ILMN_335452	LOC645251	XR_037203.1	XR_037203.1		645251	169216280	XR_037203.1	LOC645251		ILMN_3199647	0003140440	A	1495	CCAAGACACTGGCTGAGGTGTTAGGGAAGAGGAAGAGGGTGGTAGAGGAG				Xq11.1b	PREDICTED: Homo sapiens misc_RNA (LOC645251), miscRNA.					
Homo sapiens	RefSeq	NM_022549.2	ILMN_177688	FEZ1	NM_022549.2	NM_022549.2		9638	17105401	NM_022549.2	FEZ1	NP_072043.1	ILMN_2263054	0002350019	I	1535	GGTGGGGGATATGTTTTAAGACCCCCAGTTAATGCCTGAAACCGCTGCTA	11	-	125358241-125358290	11q24.2b	Homo sapiens fasciculation and elongation protein zeta 1 (zygin I) (FEZ1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9096408] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9096408] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9096408] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14690447] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with the microtubule constituent protein gamma-tubulin [goid 43015] [evidence IEA]		
Homo sapiens	RefSeq	NM_015018.2	ILMN_165122	DOPEY1	NM_015018.2	NM_015018.2		23033	34577117	NM_015018.2	DOPEY1	NP_055833.2	ILMN_1739156	0000770441	S	7476	GTCTTCAACAGCAAAGTCACAAGCCGATGTGGAGGACACTCAGGGAGTCC	6	+	83867219-83867268	6q14.1e-q14.2a	Homo sapiens dopey family member 1 (DOPEY1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 16301316] [evidence ISS]	The directed movement of substances from the Golgi to early sorting endosomes. Clathrin vesicles transport substances from the trans-Golgi to endosomes [goid 6895] [pmid 16301316] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [pmid 16301316] [evidence ISS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		KIAA1117; FLJ35610; dJ202D23.2	KIAA1117; FLJ35610; dJ202D23.2
Homo sapiens	RefSeq	XM_938855.1	ILMN_44170	LOC649783	XM_938855.1	XM_938855.1		649783	89061542	XM_938855.1	LOC649783	XP_943948.1	ILMN_1665920	0001440414	S	104	AGTGCACACTGCGGTTGCTGAGCTACCATAAGGGGGGTAAAGTAGGGACC					PREDICTED: Homo sapiens similar to HLA class II histocompatibility antigen, DRB1-8 beta chain precursor (MHC class I antigen DRB1*8) (DR-8) (DR8) (DRw8) (LOC649783), mRNA.					
Homo sapiens	RefSeq	NM_015526.1	ILMN_26693	CLIP3	NM_015526.1	NM_015526.1		25999	18496982	NM_015526.1	CLIP3	NP_056341.1	ILMN_1789733	0000650689	S	3270	CAGCTCACGACTGCCCCTTCACTGCATGTCCCCAAACTCAGCATGACTCC	19	-	41197432-41197481	19q13.12a-q13.12b	Homo sapiens CAP-GLY domain containing linker protein 3 (CLIP3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]			RSNL1; CLIPR-59; CLIPR59; FLJ33413; DKFZp586N1922	RSNL1; CLIPR-59; CLIPR59; FLJ33413; DKFZp586N1922
Homo sapiens	RefSeq	NM_182517.1	ILMN_181250	C1ORF210	NM_182517.2	NM_182517.2		149466	149588568	NM_182517.2	C1orf210	NP_872323.1	ILMN_1670064	0000540017	S	930	TTTCCCCAGGCACCTTTGCTCACATTGGTCCCCCTGCCTACGCTACTCTT	1	-	43748052-43748101	1p34.2a	Homo sapiens chromosome 1 open reading frame 210 (C1orf210), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC52423	
Homo sapiens	RefSeq	NM_030780.2	ILMN_176514	SLC25A32	NM_030780.2	NM_030780.2		81034	21314738	NM_030780.2	SLC25A32	NP_110407.2	ILMN_1683212	0006760477	S	2708	CCCCACACGGAAAAAGTGAACTGCAGTTGATATTTGGTGTTTAAGATAGC	8	-	104480111-104480160	8q22.3c	Homo sapiens solute carrier family 25, member 32 (SLC25A32), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 10978331] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 15884] [pmid 10978331] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of folic acid (pteroylglutamic acid) into, out of, within or between cells. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines [goid 8517] [pmid 10978331] [evidence NAS]	FLJ23872; MFT; MFTC	FLJ23872; MFT; MFTC
Homo sapiens	Unigene	Hs.211724	ILMN_82253	HS.211724	Hs.211724		Hs.211724		5530760	AI866653			ILMN_1842448	0000150341	S	196	TAAGTCTGAGCCAGGTGCCAGCTGGGGGATCAAATCCAGAAGAAGCAAAC	3	-	114292237-114292286		tz52a07.x1 NCI_CGAP_Brn52 Homo sapiens cDNA clone IMAGE:2292180 3, mRNA sequence					
Homo sapiens	Unigene	Hs.537591	ILMN_103376	HS.537591	Hs.537591		Hs.537591		31806941	CD639781			ILMN_1861865	0006940241	S	171	AGCCTCTGGAGGGAGCTTGGCCCTGTCAACACCTTGATTTGAACCCAGTG					AGENCOURT_14535385 NIH_MGC_191 Homo sapiens cDNA clone IMAGE:30416080 5, mRNA sequence					
Homo sapiens	RefSeq	NR_030303.1	ILMN_388024	MIR577	NR_030303.1	NR_030303.1		693162	262205857	NR_030303.1	MIR577		ILMN_3310870	0002140014	S	3	GGGAGTGAAGAGTAGATAAAATATTGGTACCTGATGAATCTGAGGCCAGG				4q26b	Homo sapiens microRNA 577 (MIR577), microRNA.					
Homo sapiens	Unigene	Hs.155980	ILMN_79261	HS.155980	Hs.155980		Hs.155980		50719776	BP873470			ILMN_1864580	0007510279	S	80	CTTCTAGGGCAGAGCAGCTGAGAGAGATTAAAAGTAGGTAGTAGGCATTC	4	+	26366505-26366554		BP873470 Sugano cDNA library, embryonal kidney Homo sapiens cDNA clone HKR13362, mRNA sequence					
Homo sapiens	RefSeq	NM_003425.2	ILMN_22117	ZNF45	NM_003425.2	NM_003425.2		7596	31377804	NM_003425.2	ZNF45	NP_003416.1	ILMN_1771884	0002140687	S	2691	GAGGGCAGGGACTTTGTTGACTGCCAAATCTACTCTGCCTTTTCAGTGCC	19	-	49109033-49109082	19q13.31b	Homo sapiens zinc finger protein 45 (ZNF45), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9570955] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1559709] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9570955] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX5; ZNF13	KOX5; ZNF13
Homo sapiens	RefSeq	NM_003850.1	ILMN_5448	SUCLA2	NM_003850.1	NM_003850.1		8803	11321582	NM_003850.1	SUCLA2	NP_003841.1	ILMN_2150019	0003930286	S	1662	CTTTCGTCGCAGCCAGTCTTTTTTGCTTCTCCTACAAAACGTAACTTGCA	13	-	47415244-47415293	13q14.2b	Homo sapiens succinate-CoA ligase, ADP-forming, beta subunit (SUCLA2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10727444] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions that utilize succinyl-CoA in the synthesis of protoporphyrin IX [goid 6781] [pmid 10727444] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [pmid 10727444] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10727444] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14643893] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	A-BETA	A-BETA
Homo sapiens	RefSeq	NM_003850.1	ILMN_5448	SUCLA2	NM_003850.1	NM_003850.1		8803	11321582	NM_003850.1	SUCLA2	NP_003841.1	ILMN_1660787	0005220220	S	1276	CGGTTACAAGGTACACGAGTCGATGATGCTAAGGCACTGATAGCGGACAG	13	-	47421124-47421164:47421619-47421627	13q14.2b	Homo sapiens succinate-CoA ligase, ADP-forming, beta subunit (SUCLA2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10727444] [evidence IDA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions that utilize succinyl-CoA in the synthesis of protoporphyrin IX [goid 6781] [pmid 10727444] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [pmid 10727444] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10727444] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14643893] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	A-BETA	A-BETA
Homo sapiens	RefSeq	NM_153378.1	ILMN_10130	SLC22A12	NM_153378.1	NM_153378.1		116085	24497486	NM_153378.1	SLC22A12	NP_700357.1	ILMN_2408748	0001450500	A	2882	CAGCGCTGGGCCAGAGAGGCATTGGTGCGAGGGATTGAATAAAGAAACAA	11	+	64126338-64126387	11q13.1b	Homo sapiens solute carrier family 22 (organic anion/urate transporter), member 12 (SLC22A12), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16775029] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14694169] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12024214] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 12024214] [evidence IDA]; The portion of the plasma membrane surrounding the brush border [goid 31526] [evidence ISS]; The portion of the plasma membrane surrounding the brush border [goid 31526] [pmid 12024214] [evidence NAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of urate into, out of, within or between cells [goid 15747] [pmid 16775029] [evidence IDA]; The directed movement of urate into, out of, within or between cells [goid 15747] [pmid 12024214] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium at the level of the cell [goid 19725] [pmid 15772301] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 12024214] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the transfer of urate from one side of the membrane to the other. Urate is the anion of uric acid, 2,6,8-trioxypurine, the end product of purine metabolism in certain mammals and the main excretory product in uricotelic animals [goid 15143] [pmid 12024214] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 15304510] [evidence IPI]	OAT4L; URAT1; RST	OAT4L; URAT1; RST
Homo sapiens	RefSeq	NM_013393.1	ILMN_21255	FTSJ2	NM_013393.1	NM_013393.1		29960	7019376	NM_013393.1	FTSJ2	NP_037525.1	ILMN_1815933	0002030243	A	1265	AACCCAGGGCTTTAGAAGGCTGAGGCTGGGGGATTGCTTGAAGTCAGGAG	7	-	2274212-2274261	7p22.2c	Homo sapiens FtsJ homolog 2 (E. coli) (FTSJ2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule [goid 8173] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FJH1; DKFZp686J14194	FJH1; DKFZp686J14194
Homo sapiens	RefSeq	XR_038712.1	ILMN_352651	LOC401537	XR_038712.1	XR_038712.1		401537	169180001	XR_038712.1	LOC401537		ILMN_3219643	0000520603	A	423	TACCGACCCCAGGGCTGACCACCAGCCTCTCACGGAGGCATCTTATGTTA				9q22.1b	PREDICTED: Homo sapiens misc_RNA (LOC401537), miscRNA.					
Homo sapiens	RefSeq	NM_003353.2	ILMN_25415	UCN	NM_003353.2	NM_003353.2		7349	12056477	NM_003353.2	UCN	NP_003344.1	ILMN_2084073	0006590025	S	467	CATATTCGACTCGGTGGGCAAGTGATGGCCCGGTTTGGGGCTGCGAAAAC	2	-	27530363-27530388:27530389-27530412	2p23.3a	Homo sapiens urocortin (UCN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8612563] [evidence TAS]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 8612563] [evidence TAS]	MGC129974; UROC; UI; MGC129975	MGC129974; UROC; UI; MGC129975
Homo sapiens	RefSeq	NM_003353.2	ILMN_25415	UCN	NM_003353.2	NM_003353.2		7349	12056477	NM_003353.2	UCN	NP_003344.1	ILMN_1707258	0005290451	S	60	ACTGGAGCTCAATCTTGGACCGTACAGACGCTCGCCGACAACCTGGCCGG	2	-	27530770-27530776:27531028-27531070	2p23.3a	Homo sapiens urocortin (UCN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8612563] [evidence TAS]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 8612563] [evidence TAS]	MGC129974; UROC; UI; MGC129975	MGC129974; UROC; UI; MGC129975
Homo sapiens	RefSeq	NM_005436.2	ILMN_19206	CCDC6	NM_005436.2	NM_005436.2		8030	46852389	NM_005436.2	CCDC6	NP_005427.2	ILMN_1745904	0007330435	S	5454	AGAGGAGAGCCAAGCGCTAGCATGCCTTTTGCCTCTGCATATCTGTGCAC	10	-	61218728-61218777	10q21.2a	Homo sapiens coiled-coil domain containing 6 (CCDC6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 8058316] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	TST1; TPC; PTC; H4; D10S170; FLJ32286	TST1; TPC; D10S170; PTC; H4; FLJ32286
Homo sapiens	RefSeq	NM_001037494.1	ILMN_14802	DYNLL1	NM_001037494.1	NM_001037494.1		8655	83267865	NM_001037494.1	DYNLL1	NP_001032583.1	ILMN_2300186	0006220086	A	407	TCCCACCTGGCATTGCATCGTGGGGAGGAACTTCGGTAGTTATGTGACAC	12	+	119420279-119420328	12q24.31a	Homo sapiens dynein, light chain, LC8-type 1 (DYNLL1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8628263] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12591950] [evidence EXP]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [pmid 8628263] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12591950] [evidence EXP]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [pmid 8628263] [evidence TAS]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14764673] [evidence EXP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8628263] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 8628263] [evidence TAS]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 18579519] [evidence IDA]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18579519] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14607844] [evidence IPI]	PIN; DLC1; MGC126137; DLC8; DNCL1; MGC126138; LC8a; hdlc1; LC8; DNCLC1	PIN; DLC1; MGC126137; DLC8; DNCL1; MGC126138; LC8a; hdlc1; LC8; DNCLC1
Homo sapiens	RefSeq	NM_006948.4	ILMN_163590	HSPA13	NM_006948.4	NM_006948.4		6782	48928055	NM_006948.4	HSPA13	NP_008879.3	ILMN_2231985	0005290673	S	3814	GTTTTGGTACTGTGTTTTCACTCAAACCACTGACTTAACAGATACTGCTG	21	-	15743559-15743608	21q11.2c	Homo sapiens heat shock protein 70kDa family, member 13 (HSPA13), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 8131751] [evidence TAS]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_006948.4	ILMN_163590	HSPA13	NM_006948.4	NM_006948.4		6782	48928055	NM_006948.4	HSPA13	NP_008879.3	ILMN_3249645	0005490139	S	1377	AGTAACGGGAGTGGCTATCCAAGCAGGGATTGATGGAGGCTCTTGGCCTC	21	-	15745996-15746045	21q11.2c	Homo sapiens heat shock protein 70kDa family, member 13 (HSPA13), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 8131751] [evidence TAS]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_006948.4	ILMN_163590	HSPA13	NM_006948.4	NM_006948.4		6782	48928055	NM_006948.4	HSPA13	NP_008879.3	ILMN_1670565	0001500044	S	3390	TCCGTTAATGCTTTTGGAAACAATTGACAAAATAGGGCAGGCAGCTCATC	21	-	15743983-15744032	21q11.2c	Homo sapiens heat shock protein 70kDa family, member 13 (HSPA13), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 8131751] [evidence TAS]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_016604.3	ILMN_28237	KDM3B	NM_016604.3	NM_016604.3		51780	54873608	NM_016604.3	KDM3B	NP_057688.2	ILMN_1706539	0002120086	S	6421	GACTCCAGGAACCATTTTCACCTATTACCAGTGTTCCCTGGGGACTCCTC	5	+	137755806-137755849:137754642-137754647	5q31.2c	Homo sapiens lysine (K)-specific demethylase 3B (KDM3B), mRNA.				KIAA1082; 5qNCA; C5orf7	KIAA1082; 5qNCA; C5orf7
Homo sapiens	RefSeq	NM_173555.1	ILMN_176427	TYSND1	NM_001040273.1	NM_001040273.1		219743	94400922	NM_001040273.1	TYSND1	NP_001035363.1	ILMN_1775677	0001940288	S	2139	AGGGGCGCTCTTGACACTGTGCCTTCATTTTCCAGCCCACAGCCTGGGTC	10	-	71899029-71899078	10q22.1a	Homo sapiens trypsin domain containing 1 (TYSND1), transcript variant 2, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	FLJ40378; MGC34695; MGC131934	MGC34695
Homo sapiens	RefSeq	XM_936457.1	ILMN_309019	SYDE2	NM_032184.1	NM_032184.1		84144	149274654	NM_032184.1	SYDE2	NP_115560.1	ILMN_1691403	0001400021	A	3290	GACAGTCCACTTAGCAATCGTTATGCAGGAGACTGGAGCAGCTGTGGGGA	1	-	85624727-85624776	1p22.3e	Homo sapiens synapse defective 1, Rho GTPase, homolog 2 (C. elegans) (SYDE2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that initiates the activity of an inactive GTPase of the Rho family through the replacement of GDP by GTP [goid 32862] [evidence ISS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence ISS]	RP11-33E12.1; FLJ13815	
Homo sapiens	RefSeq	NM_133642.2	ILMN_11779	LARGE	NM_133642.2	NM_133642.2		9215	59853581	NM_133642.2	LARGE	NP_598397.1	ILMN_2408430	0004570242	A	3562	CCTTCAGGATGATCACCGAGGCTCCCGTGACTTTGAACTCCCTACTCTCC	22	-	31999582-31999631	22q12.3b	Homo sapiens like-glycosyltransferase (LARGE), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 9892679] [evidence TAS]	The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide moiety of a glycoprotein [goid 6044] [pmid 9892679] [evidence TAS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 9892679] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 9892679] [evidence TAS]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence ISS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [pmid 9892679] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [pmid 9892679] [evidence TAS]	MDC1D; KIAA0609	MDC1D; KIAA0609
Homo sapiens	RefSeq	NM_002997.4	ILMN_1846	SDC1	NM_002997.4	NM_002997.4		6382	55925657	NM_002997.4	SDC1	NP_002988.3	ILMN_1768953	0004480474	I	29	GGGGGGCCAGTTTTTGCAACGGCTAAGGAAGGGCCTGTGGGTTTATTATA	2	-	20424849-20424898	2p24.1d	Homo sapiens syndecan 1 (SDC1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2324102] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	syndecan; SDC; CD138; SYND1	syndecan; SDC; CD138; SYND1
Homo sapiens	RefSeq	NM_016301.2	ILMN_15678	GPN3	NM_016301.2	NM_016301.2		51184	21361522	NM_016301.2	GPN3	NP_057385.2	ILMN_1704943	0004150431	S	1270	GTCCGAAGGGAAAAAGCTGCAAGGATATATATAAGACCACTGCTTATCTG	12	-	109374813-109374862	12q24.11c	Homo sapiens GPN-loop GTPase 3 (GPN3), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11256614] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC32810; MGC14560	MGC32810; MGC14560
Homo sapiens	RefSeq	NM_016301.2	ILMN_15678	GPN3	NM_016301.2	NM_016301.2		51184	21361522	NM_016301.2	GPN3	NP_057385.2	ILMN_3239426	0006980736	S	524	GGCAGCCCTGAGTGCCATGATCTCTCTAGAAATTCCGCAAGTCAACATCA	12	-	109378051-109378100	12q24.11c	Homo sapiens GPN-loop GTPase 3 (GPN3), mRNA.	Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11256614] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC32810; MGC14560	MGC32810; MGC14560
Homo sapiens	RefSeq	XM_942125.1	ILMN_176899	ULK1	XM_001133335.1	XM_001133335.1		8408	113423998	XM_001133335.1	ULK1	XP_001133335.1	ILMN_1761288	0004200554	I	4448	AGGGCAGAAGCTGGATGTGTTGAGGGACAATGCAAACCCCTGCGCCACAG				12q24.33c	PREDICTED: Homo sapiens unc-51-like kinase 1 (C. elegans) (ULK1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9693035] [evidence NAS]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [pmid 17595159] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11146101] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 16940348] [evidence IMP]; Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process by which cells digest parts of their own cytoplasm [goid 10506] [pmid 17595159] [evidence IMP]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21707] [evidence IEA]; The inward migration of postmitotic granule cells along radial glial cells from the external granule layer to the internal granule cell layer [goid 21933] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [pmid 18007665] [evidence IMP]; The process by which cell surface receptors are monoubiquitinated following ligand-induced activation, and subsequently taken up into endocytic vesicles and targeted to the lysosome or vacuole for degradation; serves as a mechanism to downregulate receptor signaling [goid 31623] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of collateral sprouting [goid 48671] [evidence IEA]; Long distance growth of a single process [goid 48675] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of the nerve growth factor receptor signaling pathway [goid 51386] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9693035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11146101] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_939267.1	ILMN_183264	LAMA1	XM_001130075.1	XM_001130075.1		284217	113427864	XM_001130075.1	LAMA1	XP_001130075.1	ILMN_1664574	0000610037	I	9168	ATAATTCTCCAGTACCTGCCTCCGTGATGTTCTGCCCTGCGTCCTGCCCG				18p11.31a	PREDICTED: Homo sapiens laminin, alpha 1 (LAMA1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence NAS]; A laminin complex composed of alpha1, beta2 and gamma1 polypeptide chains [goid 5608] [evidence NAS]	The process by which the anatomical structures of an epithelial sheet are generated and organized. Morphogenesis pertains to the creation of form. An epithelial sheet is a flat surface consisting of closely packed epithelial cells [goid 2011] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure [goid 9888] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; The specification and formation of the apicobasal polarity of an epithelial cell [goid 45198] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 14557481] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 14557481] [evidence TAS]		
Homo sapiens	RefSeq	NM_005807.3	ILMN_364300	PRG4	NM_005807.3	NM_005807.3		10216	189163478	NM_005807.3	PRG4	NP_005798.2	ILMN_3221432	0002760739	A	3502	GTAGATGGACTGACTACTTTGCGCAATGGGACATTAGTTGCATTCCGAGG	1	+	186278954-186279002:186280166-186280166	1q31.1a	Homo sapiens proteoglycan 4 (PRG4), transcript variant A, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10545950] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001008396.1	ILMN_21470	WDHD1	NM_001008396.1	NM_001008396.1		11169	56550085	NM_001008396.1	WDHD1	NP_001008397.1	ILMN_2377150	0003450450	A	3174	GGTGTGGGCTAACAAAGCCAAAGGAGAAACGGCAAGTGAAGGAACTGAAG	14	-	55408359-55408408	14q22.3a	Homo sapiens WD repeat and HMG-box DNA binding protein 1 (WDHD1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9175701] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9175701] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9175701] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	AND-1	AND-1
Homo sapiens	Unigene	Hs.129603	ILMN_76828	HS.129603	Hs.129603		Hs.129603		27828759	BX097307			ILMN_1899026	0002510524	S	65	CTCTGCCAATTGTAATTCTAAGTTGCCGCTGATGGTAATGGTGCATTTAG	13	-	111802222-111802271		BX097307 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGp998P074068, mRNA sequence					
Homo sapiens	RefSeq	NM_006214.3	ILMN_18235	PHYH	NM_006214.3	NM_006214.3		5264	83281448	NM_006214.3	PHYH	NP_006205.1	ILMN_2282352	0004060546	I	152	GCCGGGGCTGTCGTAGCTCATCCCACTTCAGGGACTATTTCCTCTGCCAG	10	-	13380213-13380251:13381974-13381984	10p13d	Homo sapiens phytanoyl-CoA 2-hydroxylase (PHYH), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 8954107] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8954107] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9326940] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8954107] [evidence TAS]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of the reaction: phytanoyl-CoA + 2-oxoglutarate + O2 = 2-hydroxyphytanoyl-CoA + succinate + CO2 [goid 48244] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LN1; PAHX; LNAP1; PHYH1; RD	LN1; PAHX; LNAP1; PHYH1; RD
Homo sapiens	RefSeq	NM_006214.3	ILMN_18235	PHYH	NM_006214.3	NM_006214.3		5264	83281448	NM_006214.3	PHYH	NP_006205.1	ILMN_2385566	0007550670	A	615	AGGACCTGCACTATTTCCCCTTCAGGCCCAGCGATCTCATCGTTTGCGCC	10	-	13370467-13370516	10p13d	Homo sapiens phytanoyl-CoA 2-hydroxylase (PHYH), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 8954107] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8954107] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9326940] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Pathway by which 3-methyl branched fatty acids are degraded. These compounds are not degraded by the normal peroxisomal beta-oxidation pathway, because the 3-methyl blocks the dehydrogenation of the hydroxyl group by hydroxyacyl-CoA dehydrogenase. The 3-methyl branched fatty acid is converted in several steps to pristenic acid, which can then feed into the beta-oxidative pathway [goid 1561] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8954107] [evidence TAS]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of the reaction: phytanoyl-CoA + 2-oxoglutarate + O2 = 2-hydroxyphytanoyl-CoA + succinate + CO2 [goid 48244] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LN1; PAHX; LNAP1; PHYH1; RD	LN1; PAHX; LNAP1; PHYH1; RD
Homo sapiens	RefSeq	NM_014849.2	ILMN_14178	SV2A	NM_014849.2	NM_014849.2		9900	41281523	NM_014849.2	SV2A	NP_055664.2	ILMN_1702009	0007550167	S	3920	GGTTAGGCTGCCCCATCCCACCCTACTCTGTGTGGCTGCTTTCTTTGGTG	1	-	148141936-148141985	1q21.2a	Homo sapiens synaptic vesicle glycoprotein 2A (SV2A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SV2; KIAA0736	SV2; KIAA0736
Homo sapiens	RefSeq	NM_152697.2	ILMN_13591	SLC44A5	NM_152697.3	NM_152697.3		204962	141803400	NM_152697.3	SLC44A5	NP_689910.1	ILMN_1744003	0000580152	S	1995	CTGGCCTTCCTATTCTTCACACAAAGACTGCCAGTGATTGCACAAGGACC	1	-	75452011-75452060	1p31.1g	Homo sapiens solute carrier family 44, member 5 (SLC44A5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC34032; CTL5; FLJ34081	MGC34032; CTL5; FLJ34081
Homo sapiens	RefSeq	XM_942506.1	ILMN_137697	ASMTL	XM_942506.1	XM_942506.1		8623	89060607	XM_942506.1	ASMTL	XP_947599.1	ILMN_1732615	0001010349	A	1300	GAGTATCAGTGCTTGCTGGAGCTGCACGGCTTCCACCAGGTGCAGGTGGT				Xp22.33d,Yp11.32a	PREDICTED: Homo sapiens acetylserotonin O-methyltransferase-like (ASMTL), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of melatonin (N-acetyl-5-methoxytryptamine) [goid 30187] [pmid 9736779] [evidence TAS]	Catalysis of the reaction: S-adenosyl-L-methionine + N-acetylserotonin = S-adenosyl-L-homocysteine + melatonin (N-acetyl-5-methoxytryptamine) [goid 17096] [evidence NAS]		
Homo sapiens	RefSeq	NM_152461.2	ILMN_20244	ERN1	NM_152461.2	NM_152461.2		2081	50345998	NM_152461.2	ERN1	NP_689674.2	ILMN_1698404	0003290008	I	1172	ACTGACATGTGTGTGCCTGAGTGCCAGCCACCGTGTGAACTCTTTGGAGG	17	-	59559987-59560036	17q23.3b	Homo sapiens endoplasmic reticulum to nucleus signalling 1 (ERN1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 9637683] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 9637683] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9637683] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The conversion of a specific protein, possessing protein kinase and endoribonuclease activities, to an active form as a result of signaling via the unfolded protein response [goid 6987] [pmid 9637683] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence ISS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9637683] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9637683] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12637535] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9637683] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within ribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16891] [evidence IEA]	MGC163279; IRE1; IRE1P; FLJ30999; MGC163277	MGC163279; IRE1; IRE1P; FLJ30999; MGC163277
Homo sapiens	RefSeq	NM_030637.1	ILMN_167568	DDHD1	NM_030637.1	NM_030637.1		80821	45120112	NM_030637.1	DDHD1	NP_085140.1	ILMN_2208455	0002900520	S	3460	CTCAGAACTCCATCTTTGTACTCTTCAGATGAATATATAGACACTGTGGC	14	-	52582529-52582578	14q22.2a	Homo sapiens DDHD domain containing 1 (DDHD1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_936965.1	ILMN_32832	LOC647904	XM_936965.1	XM_936965.1		647904	88957822	XM_936965.1	LOC647904	XP_942058.1	ILMN_1676659	0006550017	S	272	TCCATGGAGAAGATCTGGACAAGCTCCACAGAGCTGCCTGGTGGGGTAAA					PREDICTED: Homo sapiens similar to protein expressed in prostate, ovary, testis, and placenta 2 isoform a (LOC647904), mRNA.					
Homo sapiens	RefSeq	NM_032471.4	ILMN_27917	PKIB	NM_032471.4	NM_032471.4		5570	32483388	NM_032471.4	PKIB	NP_115860.1	ILMN_2337263	0003610615	A	473	CCGCCGGAATGCCTTACCAGACATCCAGAGTTCAGCTGCCACAGACGGAA	6	+	122973159-122973208	6q22.31c	Homo sapiens protein kinase (cAMP-dependent, catalytic) inhibitor beta (PKIB), transcript variant 3, mRNA.		Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cAMP-dependent protein kinase [goid 4862] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	PRKACN2; FLJ23817	FLJ23817; PRKACN2
Homo sapiens	RefSeq	XM_942641.1	ILMN_38727	LOC652906	XM_942641.1	XM_942641.1		652906	89065392	XM_942641.1	LOC652906	XP_947734.1	ILMN_1736053	0001780139	S	1479	GCTGGCAGCAGGCAGGGTTCATTCCTGGTGACACAGCAACAGATGCCTGG					PREDICTED: Homo sapiens similar to Neuropeptide Y receptor type 4 (NPY4-R) (Pancreatic polypeptide receptor 1) (PP1) (LOC652906), mRNA.					
Homo sapiens	RefSeq	XM_001722982.1	ILMN_348001	LOC100128956	XM_001722982.1	XM_001722982.1		100128956	169168236	XM_001722982.1	LOC100128956	XP_001723034.1	ILMN_3191588	0007000673	A	429	GGAGTGGCAGCAGAAAACAATGAAGGCAAAGGAAGTAAGCCCGGGAAGAG				5q23.2f	PREDICTED: Homo sapiens hypothetical protein LOC100128956 (LOC100128956), mRNA.					
Homo sapiens	Unigene	Hs.578738	ILMN_130919	HS.578738	Hs.578738		Hs.578738		78418467	DA211558			ILMN_1893566	0002510653	S	469	GAGCACAGGAAGGGGCCTGGCAGACTGGTGATCCTGGTTGGAGATGAAGA	16	-	70001852-70001901		DA211558 BRAWH3 Homo sapiens cDNA clone BRAWH3000807 5, mRNA sequence					
Homo sapiens	RefSeq	NR_003589.1	ILMN_307085	LOC100101116	NR_003589.1	NR_003589.1		100101116	149944677	NR_003589.1	LOC100101116		ILMN_3249050	0005130131	S	586	AATGCCGGTGCACCTCCAGGGAATTCTCCTTTTCTACCAAGCTCCAGGCC	Y	+	6271670-6271719		Homo sapiens testis-specific transcript, Y-linked 1-like (LOC100101116), non-coding RNA.					
Homo sapiens	RefSeq	NM_139121.1	ILMN_12917	YY1AP1	NM_139121.1	NM_139121.1		55249	20986494	NM_139121.1	YY1AP1	NP_620832.1	ILMN_1675594	0006450626	I	237	GGTGTCAAGTGAAGTCTCCTTGTTATGGGGCAGTGCAGCTGTAGGCCAAG	1	-	153915631-153915680	1q22b	Homo sapiens YY1 associated protein 1 (YY1AP1), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	HCCA2; FLJ10875; YAP; FLJ13914; YY1AP; HCCA1	YAP; YY1AP; HCCA2; FLJ10875; FLJ13914; HCCA1
Homo sapiens	RefSeq	NM_004074.2	ILMN_20081	COX8A	NM_004074.2	NM_004074.2		1351	45827791	NM_004074.2	COX8A	NP_004065.1	ILMN_1809495	0004490259	S	185	CATGGAATTGGCCGTTGGGCTTACCTCCTGCTTCGTGACCTTCCTCCTGC	11	+	63498839-63498842:63500273-63500318	11q13.1a	Homo sapiens cytochrome c oxidase subunit 8A (ubiquitous) (COX8A), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 2543673] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [pmid 2543673] [evidence TAS]	COX8; COX8-2; VIII; COX VIII; COX VIII-L; VIII-L; COX8L; COX	COX8; COX8-2; VIII; COX VIII; COX VIII-L; VIII-L; COX8L; COX
Homo sapiens	RefSeq	NM_033111.2	ILMN_6087	LOC88523	NM_033111.2	NM_033111.2		88523	40255000	NM_033111.2	LOC88523	NP_149102.2	ILMN_1737561	0001440452	S	2973	GTCAGAGTGCTCAGTGCCAACCCAAGGGATTCTTTCCAGAGACGTACCCG	13	-	31905007-31905056	13q13.1a	Homo sapiens CG016 (LOC88523), mRNA.					
Homo sapiens	RefSeq	NM_001009959.1	ILMN_17688	ERMN	NM_001009959.1	NM_001009959.1		57471	58331176	NM_001009959.1	ERMN	NP_001009959.1	ILMN_1736357	0003870487	I	106	TCTAGTCTATAAAATGGAGATAACAACAGCACCTACCTCAGAAGACTGTT	2	-	158183991-158183991:158183992-158184040	2q24.1d	Homo sapiens ermin, ERM-like protein (ERMN), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	JN; KIAA1189; ermin	JN; KIAA1189; ermin
Homo sapiens	RefSeq	NM_002692.2	ILMN_19705	POLE2	NM_002692.2	NM_002692.2		5427	32189368	NM_002692.2	POLE2	NP_002683.2	ILMN_1774336	0001170326	S	1354	CCCAAGGACATCTGACTCCCCTACCTCTTTATGTCTGCCCAGTGTATTGG	14	-	50117090-50117139	14q22.1a	Homo sapiens polymerase (DNA directed), epsilon 2 (p59 subunit) (POLE2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 6693436] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9405441] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9405441] [evidence TAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 9405441] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	DPE2	DPE2
Homo sapiens	RefSeq	NM_014736.4	ILMN_2151	KIAA0101	NM_001029989.1	NM_001029989.1		9768	71773818	NM_001029989.1	KIAA0101	NP_001025160.1	ILMN_1732150	0006770253	A	907	TACTAGGATAGAATCATGGTGGGCACAGTGGCTTCTCAGGAGGCTGAGGA	15	-	64657577-64657626	15q22.31a	Homo sapiens KIAA0101 (KIAA0101), transcript variant 2, mRNA.				L5; p15(PAF); OEATC1; OEATC-1; NS5ATP9	L5; p15(PAF); OEATC1; OEATC-1; NS5ATP9
Homo sapiens	RefSeq	NM_001029989.1	ILMN_2151	KIAA0101	NM_001029989.1	NM_001029989.1		9768	71773818	NM_001029989.1	KIAA0101	NP_001025160.1	ILMN_2412521	0007550470	A	1203	TACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGTGGAGCT	15	-	64657281-64657330	15q22.31a	Homo sapiens KIAA0101 (KIAA0101), transcript variant 2, mRNA.				L5; p15(PAF); OEATC1; OEATC-1; NS5ATP9	L5; p15(PAF); OEATC1; OEATC-1; NS5ATP9
Homo sapiens	RefSeq	NM_153480.1	ILMN_15562	IL17RE	NM_153480.1	NM_153480.1		132014	24430203	NM_153480.1	IL17RE	NP_705613.1	ILMN_2409876	0003120368	A	2091	ACTTGCAGACCTAGGTTGAGCAGAGCTCCACCGCAGTCCCGGGTGTCTGC	3	+	9932473-9932491:9932492-9932522	3p25.3c	Homo sapiens interleukin 17 receptor E (IL17RE), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC71884; FLJ23658	MGC71884; FLJ23658
Homo sapiens	RefSeq	NM_177401.4	ILMN_6472	MIDN	NM_177401.4	NM_177401.4		90007	58761507	NM_177401.4	MIDN	NP_796375.3	ILMN_1746408	0000940291	S	3608	GAACCGGCTCGCCACCCTCTGCCCGGTAAGGGCTGCCCAAGAAAGCATTA	19	+	1209957-1210006	19p13.3i	Homo sapiens midnolin (MIDN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]		DKFZp547M072	DKFZp547M072
Homo sapiens	RefSeq	NM_133437.1	ILMN_11519	TTN	NM_133437.1	NM_133437.1		7273	20143921	NM_133437.1	TTN	NP_597681.1	ILMN_1653665	0002190037	I	10641	GCACTGAGCTATCTAAGGAATGTGCTAAAGAGTCCACGGGTGAGGCGCCC	2	-	179329468-179329517	2q31.2b	Homo sapiens titin (TTN), transcript variant novex-2, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 10481174] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [pmid 7569978] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 9501083] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 8937992] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 97092327] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [pmid 7569978] [evidence TAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 10481174] [evidence TAS]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [pmid 9804419] [evidence IMP]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 9804419] [evidence IMP]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9804419] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 10481174] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9804419] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 7569978] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [pmid 11717165] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 9804419] [evidence IPI]; Interacting selectively with alpha-actinin, one of a family of proteins that cross-link F-actin as antiparallel homodimers. Alpha-actinin has a molecular mass of 93-103 KDa; at the N-terminus there are two calponin homology domains, at the C-terminus there are two EF-hands. These two domains are connected by the rod domain. This domain is formed by triple-helical spectrin repeats [goid 51393] [pmid 10481174] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HMERF; LGMD2J; MPRM; CMPD4; CMD1G; TMD; CMH9; DKFZp451N061; FLJ32040	HMERF; LGMD2J; MPRM; CMPD4; CMD1G; TMD; CMH9; DKFZp451N061; FLJ32040
Homo sapiens	RefSeq	XR_039352.1	ILMN_344172	LOC730861	XR_039352.1	XR_039352.1		730861	169171063	XR_039352.1	LOC730861		ILMN_3225712	0003130382	A	1679	GAAGGCTGAGATGGGAGGATGGATTGAGGCCAGGAGTAATTTGAGGCTGC	7	-	97365249-97365298	7q21.3d	PREDICTED: Homo sapiens misc_RNA (LOC730861), miscRNA.					
Homo sapiens	RefSeq	NM_017769.2	ILMN_29932	KIAA1333	NM_017769.2	NM_017769.2		55632	33620748	NM_017769.2	KIAA1333	NP_060239.2	ILMN_1680643	0002850364	S	5373	TAAACATATCCCAGTACCTACACTATGCCAGGTATTATGCTAGGTGATCG	14	+	30158637-30158686	14q12d	Homo sapiens KIAA1333 (KIAA1333), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	G2E3; FLJ20333	G2E3; FLJ20333
Homo sapiens	RefSeq	NM_005795.2	ILMN_18176	CALCRL	NM_005795.4	NM_005795.4		10203	144953883	NM_005795.4	CALCRL	NP_005786.1	ILMN_1758281	0000990300	S	2678	CCTTGTCAACCTCTTCCTGTCTTACCAAACAGTGGGAGGGAATTCCTAGC	2	-	188210117-188210166	2q32.1e	Homo sapiens calcitonin receptor-like (CALCRL), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7818539] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 7818539] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [evidence IEA]	 [goid 1635] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 7818539] [evidence TAS]; Combining with calcitonin to initiate a change in cell activity [goid 4948] [evidence IEA]	CGRPR; CRLR	CGRPR; CRLR
Homo sapiens	RefSeq	XM_928619.1	ILMN_39218	LOC645609	XM_928619.1	XM_928619.1		645609	88942486	XM_928619.1	LOC645609	XP_933712.1	ILMN_1753925	0006420626	S	862	AGGAAGATGCCTTTGCTGCCCAATGCGAAGGTTATGGGGAGGACGCGAGG	1	+	16196209-16196258		PREDICTED: Homo sapiens similar to TBC1 domain family member 3 (Rab GTPase-activating protein PRC17) (Prostate cancer gene 17 protein) (TRE17 alpha protein) (LOC645609), mRNA.					
Homo sapiens	RefSeq	XM_939738.1	ILMN_34982	LOC387867	XM_939738.2	XM_939738.2		387867	113423822	XM_939738.2	LOC387867	XP_944831.1	ILMN_1710885	0000620609	A	315	CCAGACGGCTGTGCTGAAGTTTGCTGCTGCCACTGGAGCCACTCCAATTG				12q15b	PREDICTED: Homo sapiens similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag) (LOC387867), mRNA.					
Homo sapiens	RefSeq	NM_006373.2	ILMN_26285	VAT1	NM_006373.3	NM_006373.3		10493	118200348	NM_006373.3	VAT1	NP_006364.2	ILMN_1700690	0002600746	S	2507	AGGACCTGGGCCATTGCAACCAAAATGGGGACTTCCTGGGTAGGGAGGTC	17	-	41166823-41166872	17q21.31a	Homo sapiens vesicle amine transport protein 1 homolog (T. californica) (VAT1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8938427] [evidence TAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ20230; VATI	FLJ20230; VATI
Homo sapiens	RefSeq	NM_001005505.1	ILMN_15989	CACNA2D2	NM_001005505.1	NM_001005505.1		9254	54112391	NM_001005505.1	CACNA2D2	NP_001005505.1	ILMN_2355274	0004570286	A	4448	ACTGCCTGCACCTTTCGGCAGAGGAACCCCCACCAGACATCACCCTTTGC	3	-	50401578-50401627	3p21.31b	Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 2 (CACNA2D2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	gene 26; KIAA0558; LUAC11.1; CACNA2D	gene 26; KIAA0558; LUAC11.1; CACNA2D
Homo sapiens	RefSeq	NM_007236.3	ILMN_23083	CHP	NM_007236.3	NM_007236.3		11261	37622888	NM_007236.3	CHP	NP_009167.1	ILMN_1779401	0006760192	S	2897	TACCACTGCAAAGTGATGGAAAAGGGTGGAGAACAGGGGAGTAGCCAGGC	15	+	39361044-39361093	15q15.1c	Homo sapiens calcium binding protein P22 (CHP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8901634] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 8901634] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA];  [goid 15459] [pmid 8901634] [evidence TAS]	SLC9A1BP	SLC9A1BP
Homo sapiens	RefSeq	XR_019565.2	ILMN_182656	LOC646294	XR_019565.2	XR_019565.2		646294	169168644	XR_019565.2	LOC646294		ILMN_3217815	0006580605	A	326	GGATGAGGTTTTGAAGATTATGCCAGTGCAGAAGCAGACCCGTGCTGGCC				6p21.1c	PREDICTED: Homo sapiens misc_RNA (LOC646294), miscRNA.					
Homo sapiens	RefSeq	XR_019565.2	ILMN_182656	LOC646294	XR_019565.2	XR_019565.2		646294	169168644	XR_019565.2	LOC646294		ILMN_3294335	0004590670	M	532	ACAAGATCGGCAAGCCCCACACCGTCCCCTGCAAGGTGACAGGCCGCCGT				6p21.1c	PREDICTED: Homo sapiens misc_RNA (LOC646294), miscRNA.					
Homo sapiens	RefSeq	NM_197954.1	ILMN_33848	CLEC7A	NM_197954.2	NM_197954.2		64581	88999595	NM_197954.2	CLEC7A	NP_922945.1	ILMN_1654504	0003420164	I	434	AACAAGCGGAGCTGAAGAAGAAAGTACAATATGGTGCTGTCTTCCTAATG	12	-	10279947-10279996	12p13.2c	Homo sapiens C-type lectin domain family 7, member A (CLEC7A), transcript variant 6, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11567029] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11567029] [evidence TAS]	The series of events in which a stimulus from a yeast is received and converted into a molecular signal [goid 1879] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of fungal origin such as chito-octomer oligosaccharide [goid 2238] [evidence IEA]; Any series of molecular signals generated as a consequence of binding to a cell surface pattern recognition receptor (PRR). Such receptors bind for molecular patterns based on a repeating or polymeric structures, like those of polysaccharides or peptidoglycans, which are sometimes associated with potential pathogens [goid 2752] [evidence IEA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [pmid 11567029] [evidence IDA]; The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; A series of molecular signals mediated by the detection of carbohydrate [goid 9756] [pmid 11567029] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 11567029] [evidence TAS]; Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism [goid 42832] [pmid 11567029] [evidence NAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence IEA]; The initial step in phagocytosis involving adhesion to bacteria, immune complexes and other particulate matter, or an apoptotic cell and based on recognition of factors such as bacterial cell wall components, opsonins like complement and antibody or protein receptors and lipids like phosphatidyl serine, and leading to intracellular signaling in the phagocytosing cell [goid 6910] [pmid 11567029] [evidence IDA]; A series of molecular signals mediated by the detection of carbohydrate [goid 9756] [pmid 11567029] [evidence TAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 11567029] [evidence TAS]; Reactions triggered in response to the presence of a protozoan that act to protect the cell or organism [goid 42832] [pmid 11567029] [evidence NAS]	Interacting selectively with an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material [goid 1846] [evidence IEA]; Combining with zymosan to initiate a change in cell activity [goid 1874] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 11567029] [evidence IDA]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [pmid 11567029] [evidence IDA]; Interacting selectively with major histocompatibility complex molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42287] [pmid 11567029] [evidence NAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 11567029] [evidence IDA]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [pmid 11567029] [evidence IDA]; Interacting selectively with major histocompatibility complex molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42287] [pmid 11567029] [evidence NAS]	CLECSF12; BGR; DECTIN1	BGR; DECTIN1; CLECSF12
Homo sapiens	RefSeq	NM_001135095.1	ILMN_364046	FNDC3B	NM_001135095.1	NM_001135095.1		64778	205360933	NM_001135095.1	FNDC3B	NP_001128567.1	ILMN_3178302	0006060440	A	6451	CCCTGGCACAAGAAATTCCAGTCATGTGAAGCAAACTGCCCTTTGTCCTC	3	+	172118002-172118051	3q26.31a	Homo sapiens fibronectin type III domain containing 3B (FNDC3B), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence IEA]			
Homo sapiens	RefSeq	XM_939320.1	ILMN_41107	LOC389816	XM_939320.2	XM_939320.2		389816	113421263	XM_939320.2	LOC389816	XP_944413.1	ILMN_1722054	0002230685	I	86	GATCCTCCTCTAGCCTGGGCCTCTCTCTCAGCCTGGCAGGGCCTGCTCCT				9q34.3e	PREDICTED: Homo sapiens cytokeratin associated protein (LOC389816), mRNA.					
Homo sapiens	RefSeq	XM_379403.3	ILMN_30843	C6ORF12	XM_379403.3	XM_379403.3		80862	88999034	XM_379403.3	C6orf12	XP_379403.2	ILMN_1715708	0000990296	I	8132	CTCTTACACACGGTTGGTGGGAAGGTGAATTAGTACAGCCACTATGGAAA					PREDICTED: Homo sapiens chromosome 6 open reading frame 12, transcript variant 1 (C6orf12), mRNA.					
Homo sapiens	RefSeq	NM_024621.1	ILMN_11342	VEPH1	NM_024621.1	NM_024621.1		79674	22003857	NM_024621.1	VEPH1	NP_078897.1	ILMN_1684336	0006650239	S	2621	AGTACAGAGTGTGAAGGCTGTGGCCAAGAAACGCAGGGACCGCTCTCTCC	3	-	158461765-158461814	3q25.32a	Homo sapiens ventricular zone expressed PH domain homolog 1 (zebrafish) (VEPH1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]			MGC126709; FLJ12604; KIAA1692; MGC142115; MGC111426	MGC126709; FLJ12604; KIAA1692; MGC142115; MGC111426
Homo sapiens	RefSeq	XM_001718022.1	ILMN_351899	LOC100131349	XM_001718022.1	XM_001718022.1		100131349	169211508	XM_001718022.1	LOC100131349	XP_001718074.1	ILMN_3218721	0006350433	A	2079	CTTCGGCTTCTGGGCCATGGCCGCGATTCTGCAGTAATTTGCAGCTGGAA					PREDICTED: Homo sapiens hypothetical protein LOC100131349 (LOC100131349), mRNA.					
Homo sapiens	RefSeq	NM_018933.2	ILMN_19310	PCDHB13	NM_018933.2	NM_018933.2		56123	14195594	NM_018933.2	PCDHB13	NP_061756.1	ILMN_1766950	0000730192	S	3240	AATGTCACAAAGCTCTAGTGCAATCTAGTTGAATGCAGATGCCTGTGCCC	5	+	140576932-140576981	5q31.3b	Homo sapiens protocadherin beta 13 (PCDHB13), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11322959] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 12231349] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 12231349] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11322959] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11322959] [evidence NAS]	PCDH-BETA13	PCDH-BETA13
Homo sapiens	RefSeq	NM_014817.2	ILMN_164846	TRIL	NM_014817.3	NM_014817.3		9865	116875827	NM_014817.3	TRIL	NP_055632.2	ILMN_1778755	0005690239	S	4883	GGCCTCTGGTTCTCCTCACCACCCACCTTTTCAGCCATAGAACATCACTG	7	-	28993097-28993146	7p15.1c	Homo sapiens TLR4 interactor with leucine rich repeats (TRIL), mRNA.					
Homo sapiens	RefSeq	XM_928111.1	ILMN_41216	LOC653563	XM_928111.1	XM_928111.1		653563	89040479	XM_928111.1	LOC653563	XP_933204.1	ILMN_1682328	0006560735	S	242	GCCTGGGCCTCAGGGGCATCTGCTGCATCAGCCTGACCAACCTGGATGGC	16	-	65802323-65802372		PREDICTED: Homo sapiens similar to leucine rich repeat containing 29 (LOC653563), mRNA.					
Homo sapiens	RefSeq	XR_000523.1	ILMN_38677	NBPF5	XR_000523.1	XR_000523.1		284610	88942934	XR_000523.1	NBPF5		ILMN_1678208	0003420102	S	1190	CACCCTTGGCCAGAAGAGAATCTGTTGCCTTGAAGGGTAGGACTCGGTCC	1	+	108729969-108730018	1p13.3c	PREDICTED: Homo sapiens neuroblastoma breakpoint family, member 5 (NBPF5), misc RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NM_138419.2	ILMN_15104	FAM54A	NM_138419.2	NM_138419.2		113115	39653314	NM_138419.2	FAM54A	NP_612428.2	ILMN_2139827	0000070497	S	1132	CCAGAAACTTCAAGGTTTGGACATCACATTTCACAGTCAGAAGGACAGCG	6	-	136594184-136594219:136596156-136596169	6q23.3b	Homo sapiens family with sequence similarity 54, member A (FAM54A), mRNA.				DUFD1	DUFD1
Homo sapiens	RefSeq	XM_942501.1	ILMN_7505	CSF2RA	NM_172245.1	NM_172245.1		1438	27437031	NM_172245.1	CSF2RA	NP_758448.1	ILMN_1661196	0001980689	A	1302	ATTCACCCCAGAGGAAGGGAAAGGCTACCGCGAAGAGGTCTTGACCGTGA	XY	+	1369261-1369310	Xp22.33e,Yp11.32a	Homo sapiens colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) (CSF2RA), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2555171] [evidence TAS]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1358805] [evidence TAS];  [goid 4896] [evidence IEA]	CSF2R; CSF2RAY; CSF2RX; GM-CSF-R-alpha; CSF2RAX; CD116; MGC3848; CDw116; GMR; MGC4838; CSF2RY; GMCSFR	
Homo sapiens	RefSeq	NM_152547.2	ILMN_18011	BTNL9	NM_152547.3	NM_152547.3		153579	141803490	NM_152547.3	BTNL9	NP_689760.2	ILMN_1772976	0002060364	S	3024	GAGCCGCTGTGCCTGGCTTCATTTTCAGAGTGAGACATTTGTACTGTGGC	5	+	180420676-180420725	5q35.3g	Homo sapiens butyrophilin-like 9 (BTNL9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			VDLS1900; BTN3	VDLS1900; BTN3
Homo sapiens	Unigene	Hs.515946	ILMN_98964	HS.515946	Hs.515946		Hs.515946		4763447	AI659877			ILMN_1907679	0002190672	S	189	GGGGGCTGATCTGAGGCAACAAGCTTCCTCCCACTGCAAATCCACAGAGC	1	+	151824296-151824345		tu01b09.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:2249753 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004042.3	ILMN_19783	ARSF	NM_004042.3	NM_004042.3		416	31742481	NM_004042.3	ARSF	NP_004033.2	ILMN_1664001	0004390403	S	1692	GCCAACGCCCTGAAGGAACACCAGGAAACCATCGTGCCTGTGACCTACCA	X	+	3012424-3012473	Xp22.33b	Homo sapiens arylsulfatase F (ARSF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 9192838] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ASF	ASF
Homo sapiens	RefSeq	XM_942007.1	ILMN_31085	LOC647309	XM_942007.1	XM_942007.1		647309	88971356	XM_942007.1	LOC647309	XP_947100.1	ILMN_1668297	0007000681	S	258	TCCACGGCCGGTGGCCAGATCGAACACCATTCTGCCTTGCCAAGACCAGT				3q28d	PREDICTED: Homo sapiens hypothetical LOC647309 (LOC647309), mRNA.					
Homo sapiens	Unigene	Hs.543144	ILMN_106801	HS.543144	Hs.543144		Hs.543144		2184758	AA459851			ILMN_1846742	0007510458	S	187	ACAACCCAACAGAGACATCGGAGGCAGTACCTTTCCCTGAGAGTCCCGCT	3	-	54066008-54066057		zx51g02.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:795794 3, mRNA sequence					
Homo sapiens	RefSeq	NM_152445.1	ILMN_13309	FAM161B	NM_152445.1	NM_152445.1		145483	22748942	NM_152445.1	FAM161B	NP_689658.1	ILMN_1688031	0001450138	S	1973	GAACAGCCTGCAAGCCCCAGGAAAGTACTGGAGGAGCTGTCTCATCAGTC	14	-	74400986-74401035	14q24.3a	Homo sapiens family with sequence similarity 161, member B (FAM161B), mRNA.				c14_5547; FLJ31697	c14_5547; FLJ31697
Homo sapiens	RefSeq	NM_001005513.1	ILMN_1481	OR4C45	NM_001005513.1	NM_001005513.1		403257	53933279	NM_001005513.1	OR4C45	NP_001005513.1	ILMN_1803291	0003710709	S	543	GCTGGCCTGCACAGACACTCACACTTTAGGGCCTCTGATTGCTGCCAACA	11	-	48367226-48367275		Homo sapiens olfactory receptor, family 4, subfamily C, member 45 (OR4C45), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_003498.3	ILMN_19844	SNN	NM_003498.4	NM_003498.4		8303	83627728	NM_003498.4	SNN	NP_003489.1	ILMN_1788251	0002940017	S	3017	TGCAGAAGCAACAGTGGGGGCACAGGGAGGGAACTCTTGACACTGAGCCA	16	+	11680252-11680301	16p13.13b	Homo sapiens stannin (SNN), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9657854] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abiotic (non-living) stimulus [goid 9628] [pmid 9657854] [evidence TAS]			
Homo sapiens	Unigene	Hs.448871	ILMN_93509	HS.448871	Hs.448871		Hs.448871		47036785	BX442635			ILMN_1821388	0006040373	S	798	GCATGGGGGATTTCTGCCCCTTCCACAATATGCTGTTTCCCCAGGAGCCT	17	-	33940083-33940125:33940128-33940134		BX442635 Homo sapiens FETAL BRAIN Homo sapiens cDNA clone CS0DF034YK16 5-PRIME, mRNA sequence					
Homo sapiens	Unigene	Hs.543887	ILMN_107396	HS.543887	Hs.543887		Hs.543887		31808777	CD640673			ILMN_1819384	0006840477	S	14	AGCTCAGCGGTTACTTCGCGTGTCATCAAACCACCTCTCTGGGTTGTTCG	5	+	140085938-140085987		AGENCOURT_14535501 NIH_MGC_191 Homo sapiens cDNA clone IMAGE:30415823 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001025071.1	ILMN_11276	RPS14	NM_001025070.1	NM_001025070.1		6208	68160914	NM_001025070.1	RPS14	NP_001020241.1	ILMN_1666635	0005260682	A	491	TGTTGGCTGCCCAGGATGTGGCCCAGAGGTGCAAGGAGCTGGGTATCACC	5	-	149826402-149826451	5q33.1c	Homo sapiens ribosomal protein S14 (RPS14), transcript variant 2, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 3529092] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 3529092] [evidence NAS]; The aggregation, arrangement and bonding together of constituent RNAs and proteins to form and maintain the small ribosomal subunit [goid 28] [evidence ISS]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule [goid 30490] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 7867928] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 3529092] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	EMTB	EMTB
Homo sapiens	RefSeq	NM_005235.1	ILMN_11180	ERBB4	NM_005235.1	NM_005235.1		2066	4885214	NM_005235.1	ERBB4	NP_005226.1	ILMN_1653728	0004210519	S	5264	GCTACGCAAGGAAATTTGTTCAGTTCGTATACTTCGTAAGAAGGAATGCG	2	-	211955231-211955280	2q34c-q34e	Homo sapiens v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) (ERBB4), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8383326] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 12646923] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10572067] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8383326] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8383326] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 8383326] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10572067] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9419975] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10572067] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11867753] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10572067] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10572067] [evidence IDA]	HER4; MGC138404	HER4; MGC138404
Homo sapiens	RefSeq	NM_175744.3	ILMN_162499	RHOC	NM_001042678.1	NM_001042678.1		389	111494247	NM_001042678.1	RHOC	NP_001036143.1	ILMN_1673305	0004390619	S	1249	GGAGTTGTTTTCGGCAGGGGCCTTGTCTCTCACTGCATTTGGTCAGGGGG	1	-	113243778-113243827	1p13.2c	Homo sapiens ras homolog gene family, member C (RHOC), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8468062] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15670823] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	H9; ARHC; MGC61427; MGC1448; RHOH9; ARH9	ARHC; RHOH9; ARH9
Homo sapiens	RefSeq	XM_933071.1	ILMN_174142	LOC727751	XM_001125719.1	XM_001125719.1		727751	113425359	XM_001125719.1	LOC727751	XP_001125719.1	ILMN_1674316	0000010110	A	199	GAGACCGCCGTGCCCATTGCTCGCCTCGGTTGCCGCCGCTTTAGCCGCAG	15	+	80741980-80742029	15q25.2a	PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC727751), mRNA.					
Homo sapiens	RefSeq	NM_133370.1	ILMN_14576	YTHDC1	NM_001031732.2	NM_001031732.2		91746	94536801	NM_001031732.2	YTHDC1	NP_001026902.1	ILMN_1670878	0004040196	I	18	TTTCGGGAGCGGGATTGTTTCGCGCAGGAAGCAGGCTCCATTTTAGCGCC	4	-	69215757-69215806	4q13.2b	Homo sapiens YTH domain containing 1 (YTHDC1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		YT521-B; YT521; KIAA1966	YT521-B; YT521; KIAA1966
Homo sapiens	RefSeq	NM_001031732.1	ILMN_14576	YTHDC1	NM_001031732.2	NM_001031732.2		91746	94536801	NM_001031732.2	YTHDC1	NP_001026902.1	ILMN_1666111	0000630544	I	1327	GTTCAGAAAAGAAGCATGAGAAATTATCATCTTCCGTTCGTGCTGTCCGA	4	-	69198515-69198564	4q13.2b	Homo sapiens YTH domain containing 1 (YTHDC1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		YT521-B; YT521; KIAA1966	YT521-B; YT521; KIAA1966
Homo sapiens	RefSeq	NM_001031732.1	ILMN_14576	YTHDC1	NM_001031732.2	NM_001031732.2		91746	94536801	NM_001031732.2	YTHDC1	NP_001026902.1	ILMN_1707506	0006900288	A	3150	ATTCCTATGTTCAGTAGCGTGGTTGATGCTATTGTTTAGCCTTCCCCTCC	4	-	69179154-69179203	4q13.2b	Homo sapiens YTH domain containing 1 (YTHDC1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		YT521-B; YT521; KIAA1966	YT521-B; YT521; KIAA1966
Homo sapiens	RefSeq	NM_138394.2	ILMN_4564	HNRPLL	NM_138394.2	NM_138394.2		92906	20149708	NM_138394.2	HNRPLL	NP_612403.2	ILMN_1791575	0006560451	S	1751	GGGCTATTAGAATGGGAGTGCAAAACTGATGCAGTAGAAGCCCTTACGGC	2	-	38648873-38648922	2p22.1c	Homo sapiens heterogeneous nuclear ribonucleoprotein L-like (HNRPLL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	SRRF	SRRF
Homo sapiens	RefSeq	NM_153632.1	ILMN_9796	HOXA3	NM_153632.2	NM_153632.2		3200	84043948	NM_153632.2	HOXA3	NP_705896.1	ILMN_1678051	0004640044	I	1	ATACCCAAGTCGGTGCCACTAGCCCAGGCAGAGCCCGGCGCCGCACTAGC	7	-	27153566-27153615	7p15.2a	Homo sapiens homeobox A3 (HOXA3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The reorganization or renovation of existing blood vessels [goid 1974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The regionalization process by which information that determines the correct position at which organ primordia are formed is generated and perceived resulting in correct positioning of the new organ [goid 10159] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ [goid 48645] [evidence IEA]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The regionalization process by which information that determines the correct position at which organ primordia are formed is generated and perceived resulting in correct positioning of the new organ [goid 10159] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ [goid 48645] [evidence IEA]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC10155; HOX1E; HOX1	MGC10155; HOX1E; HOX1
Homo sapiens	RefSeq	NM_153631.1	ILMN_9796	HOXA3	NM_153632.2	NM_153632.2		3200	84043948	NM_153632.2	HOXA3	NP_705896.1	ILMN_1689426	0006580598	A	2380	TATTAGCCAGCCGCGCAGAGGATGCCGAGCACTTTCCGGGAGCAATCGGA	7	-	27146152-27146201	7p15.2a	Homo sapiens homeobox A3 (HOXA3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The reorganization or renovation of existing blood vessels [goid 1974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The regionalization process by which information that determines the correct position at which organ primordia are formed is generated and perceived resulting in correct positioning of the new organ [goid 10159] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ [goid 48645] [evidence IEA]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The regionalization process by which information that determines the correct position at which organ primordia are formed is generated and perceived resulting in correct positioning of the new organ [goid 10159] [evidence IEA]; The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone [goid 30878] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process pertaining to the initial formation of an organ from unspecified parts. The process begins with the specific processes that contribute to the appearance of the discrete structure, such as inductive events, and ends when the structural rudiment of the organ is recognizable, such as a condensation of mesenchymal cells into the organ rudiment. Organs are a natural part or structure in an animal or a plant, capable of performing some special action (termed its function), which is essential to the life or well-being of the whole. The heart and lungs are organs of animals, and the petal and leaf are organs of plants. In animals the organs are generally made up of several tissues, one of which usually predominates, and determines the principal function of the organ [goid 48645] [evidence IEA]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC10155; HOX1E; HOX1	MGC10155; HOX1E; HOX1
Homo sapiens	RefSeq	NM_020449.2	ILMN_162047	THOC2	NM_020449.2	NM_020449.2		57187	125656153	NM_020449.2	THOC2	NP_065182.1	ILMN_2390821	0002490397	A	4667	GAGAAGATGGATAAAATCTCCTCCGGTGGCAAAAAGGAGTCCAGGCATGA	X	-	122573034-122573048:122574931-122574965	Xq25b	Homo sapiens THO complex 2 (THOC2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CXorf3; dJ506G2.1; THO2	CXorf3; dJ506G2.1; THO2
Homo sapiens	RefSeq	NM_145015.2	ILMN_517	MRGPRF	NM_145015.2	NM_145015.2		219928	31543160	NM_145015.2	MRGPRF	NP_659452.2	ILMN_2075603	0000240228	S	1789	CTGCAAACAACCTCCCTTCCCCCCGTCGAGTCATTTGGTGACTTTGATGG	11	-	68528756-68528805	11q13.2c	Homo sapiens MAS-related GPR, member F (MRGPRF), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC21621; GPR140; mrgF; GPR168; RTA	MGC21621; GPR140; mrgF; GPR168; RTA
Homo sapiens	RefSeq	NM_002222.1	ILMN_12245	ITPR1	NM_002222.4	NM_002222.4		3708	154354995	NM_002222.4	ITPR1	NP_002213.4	ILMN_1789505	0003990646	S	8980	CTGGTGATGCTGTTTCTCGTTAGTGGCAGTAGTGCCTCCGTCTCCTAGTG	3	+	4726774-4726823	3p26.2a	Homo sapiens inositol 1,4,5-triphosphate receptor, type 1 (ITPR1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8648241] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8132516] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding the platelet dense tubular network [goid 31095] [pmid 1693919] [evidence EXP]; The lipid bilayer surrounding the platelet dense tubular network [goid 31095] [pmid 11413485] [evidence EXP]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 7852357] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8648241] [evidence NAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA];  [goid 5220] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [pmid 1693919] [evidence EXP]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15652484] [evidence IPI]; Combining with inositol-1,4,5-triphosphate to initiate a change in cell activity [goid 8095] [pmid 8648241] [evidence TAS]; Catalysis of the transfer of calcium (Ca) ions from one side of a membrane to the other [goid 15085] [pmid 7500840] [evidence TAS]	IP3R1; SCA16; SCA15; IP3R; INSP3R1	IP3R1; Insp3r1; IP3R
Homo sapiens	RefSeq	XR_038958.1	ILMN_342413	LOC643220	XR_038958.1	XR_038958.1		643220	169167852	XR_038958.1	LOC643220		ILMN_3208027	0004590162	A	1005	TGGACACCAAGAAGCAAGTGCTCACCCTTCACAAGTCCTTGCCAGTGCCA				5q12.1b	PREDICTED: Homo sapiens misc_RNA (LOC643220), miscRNA.					
Homo sapiens	RefSeq	NM_002183.2	ILMN_19423	IL3RA	NM_002183.2	NM_002183.2		3563	28416950	NM_002183.2	IL3RA	NP_002174.1	ILMN_1747344	0007570292	S	1466	CAGGTCGTGCAGAAAACTTGAGACTGGGGTTCAGGGCTTGTGGGGGTCTG	Y	+	1420715-1420722:1420993-1421034	Xp22.33e-p22.33d,Yp11.32a	Homo sapiens interleukin 3 receptor, alpha (low affinity) (IL3RA), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with interleukin-3 to initiate a change in cell activity [goid 4912] [pmid 1833064] [evidence TAS]	hIL-3Ra; IL3RAY; IL3R; IL3RY; MGC34174; IL3RX; CD123	hIL-3Ra; IL3RAY; IL3R; IL3RY; MGC34174; IL3RX; CD123
Homo sapiens	RefSeq	XM_926467.1	ILMN_45582	LOC643093	XM_926467.1	XM_926467.1		643093	89041536	XM_926467.1	LOC643093	XP_931560.1	ILMN_1656379	0003450504	S	181	ATACTTTCCCAGCCGGGCGCTGATTCGTCACGGCGAAGAGGGCCGAGGAG	17	+	36057794-36057843		PREDICTED: Homo sapiens hypothetical protein LOC643093 (LOC643093), mRNA.					
Homo sapiens	RefSeq	NM_015684.2	ILMN_1363	ATP5S	NM_001003805.1	NM_001003805.1		27109	51558776	NM_001003805.1	ATP5S	NP_001003805.1	ILMN_1679188	0005560053	A	788	CCCATGGTCATGTGACTCCAGATACTTCTGGGGCTGGTTGAATGCAGTGT	14	+	49858006-49858055	14q22.1b	Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) (ATP5S), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 6143319] [evidence NAS]	Catalysis of the transfer of hydrogen ions from one side of a membrane to the other [goid 15078] [pmid 6143319] [evidence NAS]	ATPW; HSU79253	ATPW; HSU79253
Homo sapiens	RefSeq	NM_018679.2	ILMN_309268	TCP11	NM_001093728.1	NM_001093728.1		6954	148226213	NM_001093728.1	TCP11	NP_001087197.1	ILMN_1662117	0002570048	S	1769	GAGGAGGCCCATCATCTTCCTGGAGTAACATCACCAGTGACCAGCAGACA	6	-	35193937-35193986	6p21.31d-p21.31c	Homo sapiens t-complex 11 homolog (mouse) (TCP11), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		D6S230E; MGC111103; KIAA0229	D6S230E; MGC111103; KIAA0229
Homo sapiens	RefSeq	NM_152670.1	ILMN_1109	C2ORF51	NM_152670.1	NM_152670.1		200523	22749356	NM_152670.1	C2orf51	NP_689883.1	ILMN_1774219	0000780044	S	510	CCAACCAGGTCCTCCAGAGTGCTGACTTTCCGTGCCTCGTGGATCCCAAA	2	+	88609932-88609981	2p11.2c	Homo sapiens chromosome 2 open reading frame 51 (C2orf51), mRNA.				FLJ25369; TSC21	FLJ25369; TSC21
Homo sapiens	RefSeq	NM_004684.2	ILMN_176969	SPARCL1	NM_004684.3	NM_004684.3		8404	141803318	NM_004684.3	SPARCL1	NP_004675.2	ILMN_1795251	0001030021	S	2156	ACTTGCTCCTCTGCGAGCATCTCTGGTGCCCATGGAACACTGCATAACCC	4	-	88619687-88619736	4q22.1a	Homo sapiens SPARC-like 1 (mast9, hevin) (SPARCL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PIG33; SC1	PIG33; SC1
Homo sapiens	RefSeq	NM_176816.3	ILMN_40720	CCDC125	NM_176816.3	NM_176816.3		202243	88014608	NM_176816.3	CCDC125	NP_789786.2	ILMN_3244319	0000650564	S	3301	CAGCCTGGGCAACATGGTGAAACCCCATCTATACAAAAACTCGGCAAGGC	5	-	68612887-68612936	5q13.2a	Homo sapiens coiled-coil domain containing 125 (CCDC125), mRNA.				KENAE	KENAE
Homo sapiens	RefSeq	NM_022737.1	ILMN_23233	LPPR2	NM_022737.1	NM_022737.1		64748	12232394	NM_022737.1	LPPR2	NP_073574.1	ILMN_1667319	0004480221	S	2354	GCTTGCCCCACTTCAGAGGTTTTGGGGTTCAGGGTGCTGTGTCTCCCCTT	19	+	11337048-11337097	19p13.2b	Homo sapiens lipid phosphate phosphatase-related protein type 2 (LPPR2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ13055; DKFZp761E1121; PRG-4	FLJ13055; DKFZp761E1121; PRG-4
Homo sapiens	RefSeq	XR_039704.1	ILMN_348061	LOC100128507	XR_039704.1	XR_039704.1		100128507	169161587	XR_039704.1	LOC100128507		ILMN_3268152	0006510224	M	367	GCTGGGTGTGGTGGTACGAGACTGTAATCCCATCTACTTGAGGAGCTGAG				1p32.3d	PREDICTED: Homo sapiens misc_RNA (LOC100128507), miscRNA.					
Homo sapiens	RefSeq	XR_042383.1	ILMN_341798	LOC100130285	XR_042383.1	XR_042383.1		100130285	169209619	XR_042383.1	LOC100130285		ILMN_3184433	0001710133	A	326	AGGTCTCTGTGCTTGGGGGGATCCCTGTACTGGGGAGGAGTCCCTGTGCT				16p13.3f	PREDICTED: Homo sapiens misc_RNA (LOC100130285), miscRNA.					
Homo sapiens	RefSeq	NM_005207.2	ILMN_165503	CRKL	NM_005207.2	NM_005207.2		1399	34452719	NM_005207.2	CRKL	NP_005198.1	ILMN_1690122	0005960767	S	4943	GTCCCTACAGGAGGAACAGTGGCCTTGCTTCTTAGACGGTCTTCACTGTG	22	+	19637655-19637704	22q11.21e	Homo sapiens v-crk sarcoma virus CT10 oncogene homolog (avian)-like (CRKL), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 8361759] [evidence TAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 8798523] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8798523] [evidence TAS]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IEA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [pmid 8361759] [evidence TAS]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8798523] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16284401] [evidence IPI]		
Homo sapiens	RefSeq	XM_927250.1	ILMN_33542	LOC653182	XM_927250.1	XM_927250.1		653182	89047217	XM_927250.1	LOC653182	XP_932343.1	ILMN_1678204	0000670445	S	121	CTCCAGCCAGTTCCAACTCAGGAGACAGGTCCCAAGGCCATGGGAGATCT	18	+	58383584-58383633		PREDICTED: Homo sapiens similar to zinc finger, CCHC domain containing 2 (LOC653182), mRNA.					
Homo sapiens	Unigene	Hs.187293	ILMN_80899	HS.187293	Hs.187293		Hs.187293		11593467	BF510169			ILMN_1824196	0000110242	S	296	TGGGCCTCTCCACAGGGTGGCTTGGGCTTCCTTACAGCATGGTGGCTTAT	X	+	39761099-39761129:39766722-39766740		UI-H-BI4-apj-b-11-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3087333 3, mRNA sequence					
Homo sapiens	RefSeq	NM_017829.5	ILMN_742	CECR5	NM_017829.5	NM_017829.5		27440	51093854	NM_017829.5	CECR5	NP_060299.4	ILMN_2335398	0001190035	A	1253	AGCCTGGACCTGTGGGCGAGTCCCATTGGCTGGGCTCTGGCCTGATCACT	22	-	17618833-17618882	22q11.1d	Homo sapiens cat eye syndrome chromosome region, candidate 5 (CECR5), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_152414.3	ILMN_21318	BHLHE22	NM_152414.3	NM_152414.3		27319	44680137	NM_152414.3	BHLHE22	NP_689627.1	ILMN_1699585	0007210551	S	3075	GTGAGCTTTCAGTTTTAGTTTTGCATGGCTGTTTGACTGCCTTTCCGCCC	8	+	65495888-65495937	8q12.3c	Homo sapiens basic helix-loop-helix family, member e22 (BHLHE22), mRNA.				CAGL85; Beta3; TNRC20	CAGL85; Beta3; TNRC20
Homo sapiens	RefSeq	XM_001720343.1	ILMN_341194	LOC100130516	XM_001720343.1	XM_001720343.1		100130516	169217578	XM_001720343.1	LOC100130516	XP_001720395.1	ILMN_3231944	0006380037	I	899	AAATCTTGGCTGTGTGTAGTGGCTCACGCCTGTAATCCCAGCTCTTAGGG					PREDICTED: Homo sapiens hypothetical protein LOC100130516 (LOC100130516), mRNA.					
Homo sapiens	RefSeq	NM_144654.1	ILMN_6194	C9ORF116	NM_144654.2	NM_144654.2		138162	115430215	NM_144654.2	C9orf116	NP_653255.1	ILMN_1723709	0002120161	S	465	CAGGGCCTCCTGGAAAATCATCATCCCTCATCACCCACAGTCGCCCGATT	9	-	138387187-138387236	9q34.3b	Homo sapiens chromosome 9 open reading frame 116 (C9orf116), transcript variant 2, mRNA.				pierce 1; RP11-426A6.4; FLJ13945; MGC29761	RP11-426A6.4; MGC29761
Homo sapiens	RefSeq	NM_144654.2	ILMN_6194	C9ORF116	NM_144654.2	NM_144654.2		138162	115430215	NM_144654.2	C9orf116	NP_653255.1	ILMN_2329569	0002470528	A	373	GACCGGCTCAACTTCCACCCCAGTTACAACATCAACAGGCCATCCATCTG	9	-	138387279-138387328	9q34.3b	Homo sapiens chromosome 9 open reading frame 116 (C9orf116), transcript variant 2, mRNA.				pierce 1; RP11-426A6.4; FLJ13945; MGC29761	RP11-426A6.4; MGC29761
Homo sapiens	RefSeq	NM_147175.2	ILMN_4199	HS6ST2	NM_147175.3	NM_147175.3		90161	116295253	NM_147175.3	HS6ST2	NP_671704.3	ILMN_1739429	0006100494	S	4149	CTGATAGGTATTGTTGGAAAGCAGGATGAAGCCTGAGCCAGTGGAAAAGC	X	-	131761649-131761698	Xq26.2a-q26.2b	Homo sapiens heparan sulfate 6-O-sulfotransferase 2 (HS6ST2), transcript variant S, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC130022; MGC130023	
Homo sapiens	RefSeq	NM_198180.1	ILMN_24483	QRFP	NM_198180.1	NM_198180.1		347148	38016139	NM_198180.1	QRFP	NP_937823.1	ILMN_1718848	0006220754	S	328	GGCCCGTTAGGGAACCTGGCTGAGGAGCTCAATGGCTACAGCAGGAAGAA	9	-	133768848-133768897	9q34.12a	Homo sapiens pyroglutamylated RFamide peptide (QRFP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 14657341] [evidence IDA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 14657341] [evidence IDA]	RP11-618A20.5; QRFP; P518; 26RFa; MGC119794	RP11-618A20.5; QRFP; P518; 26RFa; MGC119794
Homo sapiens	RefSeq	Hs.22907	ILMN_22131	XYLT1	NM_022166.3	NM_022166.3		64131	112807212	NM_022166.3	XYLT1	NP_071449.1	ILMN_1830462	0000630609	S	9044	CCTTGAGGTAGAATGTGAGTCTCAGAAATGACTGCATTACCTGCcctttt	16	-	17197797-17197846	16p12.3c	Homo sapiens xylosyltransferase I (XYLT1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [pmid 11099377] [evidence TAS]	Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate [goid 30158] [pmid 11099377] [evidence TAS]	XT1; XT-I	
Homo sapiens	RefSeq	NM_031443.3	ILMN_4086	CCM2	NM_031443.3	NM_031443.3		83605	71067339	NM_031443.3	CCM2	NP_113631.1	ILMN_1692271	0000580670	I	122	GGCCGCGGGAGCCGCACGCGGCGATATGGAAGAGGAGGGCAAGAAGGGCA	7	+	45006433-45006457:45006458-45006482	7p13c	Homo sapiens cerebral cavernous malformation 2 (CCM2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16037064] [evidence IDA]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [pmid 14740320] [evidence IMP]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 16037064] [evidence TAS]; A series of molecular signals in which a stress-activated MAP kinase cascade relays one or more of the signals; MAP kinase cascades involve at least three protein kinase activities and culminate in the phosphorylation and activation of a MAP kinase [goid 51403] [pmid 16037064] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16037064] [evidence IPI]	MGC4067; MGC4607; C7orf22; PP10187; MGC74868	MGC4067; MGC4607; C7orf22; PP10187; MGC74868
Homo sapiens	Unigene	Hs.333693	ILMN_86444	HS.333693	Hs.333693		Hs.333693		13734157	BG212470			ILMN_1817003	0004730719	S	222	GGCAAATGGTGGGCCAAAGGAATAAAGAAGGCATGCAAAACTCTCGACAG	2	+	145053351-145053400		RST32057 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_207367.1	ILMN_12777	FLJ42291	NM_207367.1	NM_207367.1		346547	46409357	NM_207367.1	FLJ42291	NP_997250.1	ILMN_1674060	0002260719	S	2484	GGACCACTCAGCCCAGACAGTCCGGCCATAATAACCCCAGGAGATCAGGT	7	-	152739342-152739391	7q36.2a	Homo sapiens FLJ42291 protein (FLJ42291), mRNA.	The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Homo sapiens	RefSeq	NM_016653.1	ILMN_139014	ZAK	NM_016653.1	NM_016653.1		51776	7706600	NM_016653.1	ZAK	NP_057737.1	ILMN_1672390	0004830279	I	3532	TGGAGTAAGACAGTAAATATCAGCCTTGCAGCAAGACAGCTCTGAGCAGC	2	+	173840775-173840824	2q31.1e	Homo sapiens sterile alpha motif and leucine zipper containing kinase AZK (ZAK), transcript variant 1, mRNA.				mlklak; MLTK	mlklak; MLTK
Homo sapiens	RefSeq	XR_038554.1	ILMN_348128	LOC646438	XR_038554.1	XR_038554.1		646438	169216168	XR_038554.1	LOC646438		ILMN_3290862	0000830228	M	4	GCTCCTACAAAGCTGACTTCCCGCAAATCGACTGGTGGTAAAACACCCGG				Xp21.3a	PREDICTED: Homo sapiens misc_RNA (LOC646438), miscRNA.					
Homo sapiens	RefSeq	XM_001718681.1	ILMN_340140	LOC729912	XM_001718681.1	XM_001718681.1		729912	169162690	XM_001718681.1	LOC729912	XP_001718733.1	ILMN_3239721	0003390491	S	90	GCCTCGCTCCTGCGCTCTGACCCACGCCACCGGCTCGCACTTGGGGTCCG	1	-	159708645-159708694	1q23.3a	PREDICTED: Homo sapiens hypothetical LOC729912 (LOC729912), mRNA.					
Homo sapiens	RefSeq	XM_941663.1	ILMN_44021	LOC652255	XM_941663.1	XM_941663.1		652255	89036523	XM_941663.1	LOC652255	XP_946756.1	ILMN_1674689	0001440468	S	413	CAGCAGCTACCCCCTGTGTTGCTCTTGAGCTGCAGGTTTCTGGCTGTGCC					PREDICTED: Homo sapiens hypothetical protein LOC652255 (LOC652255), mRNA.					
Homo sapiens	RefSeq	NM_020168.3	ILMN_22172	PAK6	NM_020168.3	NM_020168.3		56924	21536446	NM_020168.3	PAK6	NP_064553.1	ILMN_1708223	0002030735	S	3516	AGGCGAACCACCTCCGGGTTTCCATCATGTCAAGGTCACAGGCATCCATG	15	+	38356636-38356685	15q15.1a	Homo sapiens p21(CDKN1A)-activated kinase 6 (PAK6), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PAK5	PAK5
Homo sapiens	RefSeq	NM_022903.2	ILMN_21600	CCDC71	NM_022903.3	NM_022903.3		64925	153791661	NM_022903.3	CCDC71	NP_075054.3	ILMN_1768433	0005310050	S	1544	TCCTTCACACGGCAATGTTTGGGGAAACTAAGCCCAGCTGTCTGTGTGGC	3	-	49200186-49200235	3p21.31d	Homo sapiens coiled-coil domain containing 71 (CCDC71), mRNA.				FLJ13629; FLJ12800	FLJ13629; FLJ12800
Homo sapiens	RefSeq	NM_021015.3	ILMN_6527	SSX5	NM_021015.3	NM_021015.3		6758	28559014	NM_021015.3	SSX5	NP_066295.3	ILMN_1680569	0002490279	A	1062	GCATAGAACAACACTACCCTCCTCTCTTCCCAGATGTGACCACTGAGGGC	X	-	48045928-48045977	Xp11.23e	Homo sapiens synovial sarcoma, X breakpoint 5 (SSX5), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC9494	MGC9494
Homo sapiens	RefSeq	NM_021015.3	ILMN_6527	SSX5	NM_021015.3	NM_021015.3		6758	28559014	NM_021015.3	SSX5	NP_066295.3	ILMN_1714818	0002600632	I	150	GGAATACATTTGGTGAATCTCAGTCCGTTCTGGAAGGTGGGAAGAGAGCC	X	-	48054488-48054537	Xp11.23e	Homo sapiens synovial sarcoma, X breakpoint 5 (SSX5), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC9494	MGC9494
Homo sapiens	RefSeq	NM_000797.2	ILMN_17354	DRD4	NM_000797.2	NM_000797.2		1815	32483396	NM_000797.2	DRD4	NP_000788.2	ILMN_2112915	0007050709	S	1192	GTCATCTACACTGTCTTCAACGCCGAGTTCCGCAACGTCTTCCGCAAGGC	11	+	630535-630584	11p15.5d	Homo sapiens dopamine receptor D4 (DRD4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1319557] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1319557] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 7921596] [evidence IC ]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 9457173] [evidence TAS]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7195] [pmid 9457173] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8413587] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups [goid 14075] [pmid 16839358] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50709] [pmid 16839358] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel [goid 51927] [pmid 7921596] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the neurotransmitter dopamine to initiate a change in cell activity [goid 4952] [evidence IEA]; Combining with the neurotransmitter dopamine and activating adenylate cyclase via coupling to Gi/Go to initiate a change in cell activity [goid 1591] [pmid 9457173] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 1840645] [evidence IDA]	D4DR	D4DR
Homo sapiens	RefSeq	NR_003040.1	ILMN_169528	LOC649946	NR_003040.1	NR_003040.1		649946	94681036	NR_003040.1	LOC649946		ILMN_2181241	0006270605	S	506	CGGCCTGATGGAGAGAAGGAACATGTTCGACTGGCTCCTGATTACAATGC	11	-	118378958-118379007	11q23.3e	Homo sapiens ribosomal protein L23a pseudogene (LOC649946), non-coding RNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]		
Homo sapiens	RefSeq	NM_002885.1	ILMN_13405	RAP1GAP	NM_002885.1	NM_002885.1		5909	4506414	NM_002885.1	RAP1GAP	NP_002876.1	ILMN_1776519	0004890181	S	3184	TGGCCCCAATACCCATTTTGGAAGCCCCTGTGGCCGTGTGGATGTCGGTA	1	-	21795338-21795387	1p36.12b	Homo sapiens RAP1 GTPase activating protein (RAP1GAP), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1904317] [evidence TAS]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 1904317] [evidence TAS]	KIAA0474; Rap1GAP1; RAP1GA1; rap1GAPII	KIAA0474; Rap1GAP1; RAP1GA1; rap1GAPII
Homo sapiens	RefSeq	XM_293325.4	ILMN_45805	LOC347411	XM_936849.2	XM_936849.2		347411	113430377	XM_936849.2	LOC347411	XP_941942.1	ILMN_1689432	0004070095	A	686	TCTTCATGCGCTTCGCCTACCGCGTACAGCCTCGAAACCTGCTGCTGATG				Xp11.4c	PREDICTED: Homo sapiens similar to brain protein 44-like (LOC347411), mRNA.					
Homo sapiens	RefSeq	NM_032663.2	ILMN_5598	USP30	NM_032663.2	NM_032663.2		84749	34147434	NM_032663.2	USP30	NP_116052.1	ILMN_1741455	0004830010	S	1792	TGGGAGCCAGCCCCAGTTCACACCAAACCAGGCTCCCTGAACAGTCCTGT	12	+	108008264-108008313	12q24.11a	Homo sapiens ubiquitin specific peptidase 30 (USP30), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	MGC10702; FLJ40511	MGC10702; FLJ40511
Homo sapiens	RefSeq	NR_002944.2	ILMN_42282	HNRPA1L-2	NR_002944.2	NR_002944.2		664709	115529279	NR_002944.2	HNRPA1L-2		ILMN_2220283	0007320424	S	927	GGCGGTGGAGGCCAATACTTTGCAAAACCACGAAACCAAGTGGCTATGGC	19	-	11776928-11776977	19p13.2a	Homo sapiens heterogeneous nuclear ribonucleoprotein A1 pseudogene (HNRPA1L-2), non-coding RNA.					
Homo sapiens	RefSeq	XM_945184.1	ILMN_32729	LOC653441	XM_945184.2	XM_945184.2		653441	113423776	XM_945184.2	LOC653441	XP_950277.2	ILMN_1750049	0004730544	A	594	GCAGGCCACAATTGCTGCCAGTCGGCAGGCCAGCTCCCCAAACACCAGCA				12q13.2b	PREDICTED: Homo sapiens similar to polyhomeotic 1-like, transcript variant 3 (LOC653441), mRNA.					
Homo sapiens	RefSeq	XM_373058.2	ILMN_9470	LOC391746	XM_373058.2	XM_373058.2		391746	51464847	XM_373058.2	LOC391746	XP_373058.2	ILMN_3244121	0004810672	S	215	GGAAAACACATACGAAAGGCAAGAAGGAGAGCAAGCCCACCGTGGATGCG	5	+	17575124-17575173	5p15.1a	PREDICTED: Homo sapiens similar to TBP-associated factor 11 (LOC391746), mRNA.					
Homo sapiens	RefSeq	NM_007276.3	ILMN_5171	CBX3	NM_007276.3	NM_007276.3		11335	20544152	NM_007276.3	CBX3	NP_009207.2	ILMN_1782173	0006180431	A	1742	TATATTGTTTACTTTATTGTAAATACTGGTGAACAGTGGTTAATAAATAG	7	+	26219432-26219481	7p15.2b	Homo sapiens chromobox homolog 3 (HP1 gamma homolog, Drosophila) (CBX3), transcript variant 1, mRNA.	The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 779] [evidence ISS]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 11101528] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [pmid 8663349] [evidence NAS]; A region at which the centric regions of polytene chromosomes are joined together [goid 5701] [evidence ISS]; The dispersed less dense form of chromatin in the interphase nucleus. It exists in at least two forms, a some being in the form of transcriptionally active chromatin which is the least condensed, while the rest is inactive euchromatin which is more condensed than active chromatin but less condensed than heterochromatin [goid 5719] [pmid 11124534] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 11101528] [evidence IDA]; A region of heterochromatin located near the centromere of a chromosome in the nucleus [goid 31618] [evidence ISS]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 8663349] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 9636147] [evidence IDA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 9636147] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 8663349] [evidence IPI]	HP1-GAMMA; HP1Hs-gamma; HECH	HP1-GAMMA; HP1Hs-gamma; HECH
Homo sapiens	RefSeq	NM_007276.3	ILMN_5171	CBX3	NM_007276.3	NM_007276.3		11335	20544152	NM_007276.3	CBX3	NP_009207.2	ILMN_1774086	0000380270	I	2	GCTGAGGAGACTCCGGTCACTGTCCTCGCCCCGCCTCCCCCTTCCCTCCC	7	+	26207625-26207674	7p15.2b	Homo sapiens chromobox homolog 3 (HP1 gamma homolog, Drosophila) (CBX3), transcript variant 1, mRNA.	The region of a condensed chromosome that includes the centromere and associated proteins, including the kinetochore. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 779] [evidence ISS]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 11101528] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [pmid 8663349] [evidence NAS]; A region at which the centric regions of polytene chromosomes are joined together [goid 5701] [evidence ISS]; The dispersed less dense form of chromatin in the interphase nucleus. It exists in at least two forms, a some being in the form of transcriptionally active chromatin which is the least condensed, while the rest is inactive euchromatin which is more condensed than active chromatin but less condensed than heterochromatin [goid 5719] [pmid 11124534] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 11101528] [evidence IDA]; A region of heterochromatin located near the centromere of a chromosome in the nucleus [goid 31618] [evidence ISS]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 8663349] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 9636147] [evidence IDA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 9636147] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 8663349] [evidence IPI]	HP1-GAMMA; HP1Hs-gamma; HECH	HP1-GAMMA; HP1Hs-gamma; HECH
Homo sapiens	RefSeq	NM_001010910.1	ILMN_175204	LOC399706	NM_001010910.1	NM_001010910.1		399706	58219035	NM_001010910.1	LOC399706	NP_001010910.1	ILMN_1708023	0006620445	S	2025	CAGAGCACTGCATTGGGTGCCATGAATGACAGAATAAGAGTACCAGGTGC	10	+	1200256-1200305	10p15.3c	Homo sapiens hypothetical LOC399706 (LOC399706), mRNA.				RP11-529L18.1; FLJ40354	RP11-529L18.1; FLJ40354
Homo sapiens	RefSeq	XM_001717938.1	ILMN_353075	LOC730908	XM_001717938.1	XM_001717938.1		730908	169163804	XM_001717938.1	LOC730908	XP_001717990.1	ILMN_3306852	0003990348	M	481	TCACTAACTGTGCGCTGGGCCGCGTGCCCTGGAGGAAGTTTCCAGTCCAT					PREDICTED: Homo sapiens hypothetical LOC730908, transcript variant 1 (LOC730908), mRNA.					
Homo sapiens	RefSeq	NM_014821.2	ILMN_7665	KIAA0317	NM_014821.2	NM_014821.2		9870	42734314	NM_014821.2	KIAA0317	NP_055636.2	ILMN_1688106	0003170376	S	4084	CTCCGAACAGACCAGTGAGGCAGAGCAGCAAAAGCAGCCTGGAACTGGAG	14	-	74189888-74189937	14q24.3a	Homo sapiens KIAA0317 (KIAA0317), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]		
Homo sapiens	RefSeq	XM_001717781.1	ILMN_337443	LOC642446	XM_001717781.1	XM_001717781.1		642446	169203031	XM_001717781.1	LOC642446	XP_001717833.1	ILMN_3278572	0005260504	M	482	CTAGCACATTTCATTCGTTAAAGGACTATGTGTCAGTAAGGAAGAGGATA				11q14.3b	PREDICTED: Homo sapiens similar to hCG1795201 (LOC642446), mRNA.					
Homo sapiens	RefSeq	XM_001717781.1	ILMN_337443	LOC642446	XM_001717781.1	XM_001717781.1		642446	169203031	XM_001717781.1	LOC642446	XP_001717833.1	ILMN_3202093	0006480497	A	1173	CTCTCCACCTTTAATTCAGTATGTGCAAAGGCCTCTGGGTCGAGTTGGGG				11q14.3b	PREDICTED: Homo sapiens similar to hCG1795201 (LOC642446), mRNA.					
Homo sapiens	RefSeq	NM_001013848.1	ILMN_2414	EXOC6	NM_001013848.1	NM_001013848.1		54536	62243651	NM_001013848.1	EXOC6	NP_001013870.1	ILMN_1667686	0002850014	I	10	TAGGGGCCTGTCGAGCGATGTTGGAAGAAGAAACAGATCAAACCTATGAG	10	+	94584459-94584475:94584476-94584508	10q23.33a	Homo sapiens exocyst complex component 6 (EXOC6), transcript variant 2, mRNA.				SEC15L1; SEC15L3; EXOC6A; Sec15p; DKFZp761I2124; FLJ1125; FLJ11251; SEC15L; MGC33397	SEC15L1; SEC15L3; EXOC6A; Sec15p; DKFZp761I2124; FLJ1125; FLJ11251; SEC15L; MGC33397
Homo sapiens	RefSeq	XM_925776.1	ILMN_34262	LOC388160	XM_370894.4	XM_370894.4		388160	113425372	XM_370894.4	LOC388160	XP_370894.1	ILMN_1790727	0002340546	A	325	GATACTAAGGAGAACAGTTCGGTGAGGAAAGAAACCAAGCTATTTTCTCT	15	+	82641819-82641868	15q25.2b	PREDICTED: Homo sapiens hypothetical LOC388160 (LOC388160), mRNA.					
Homo sapiens	RefSeq	XM_370894.3	ILMN_34262	LOC388160	XM_370894.4	XM_370894.4		388160	113425372	XM_370894.4	LOC388160	XP_370894.1	ILMN_1656981	0005570192	S	7	CAGATGGGTCCAGCAGTGCTGGGTCAAGGCCAGGAGGGGCAGCCGGAAGC	15	+	82632255-82632257:82632258-82632304	15q25.2b	PREDICTED: Homo sapiens hypothetical LOC388160 (LOC388160), mRNA.					
Homo sapiens	RefSeq	NM_017493.4	ILMN_25869	OTUD4	NM_017493.4	NM_017493.4		54726	40807494	NM_017493.4	OTUD4	NP_059963.1	ILMN_2287604	0004670450	I	653	GGACTGTTTGCTTTGAAAGTTGGTGTTTTTGGTTGATGAGAATTTACGTC	4	-	146299872-146299921	4q31.22a	Homo sapiens OTU domain containing 4 (OTUD4), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	HSHIN1; KIAA1046; DKFZp434I0721; HIN1	HSHIN1; KIAA1046; DKFZp434I0721; HIN1
Homo sapiens	RefSeq	NM_017493.4	ILMN_25869	OTUD4	NM_017493.4	NM_017493.4		54726	40807494	NM_017493.4	OTUD4	NP_059963.1	ILMN_2394975	0005960341	A	117	GCGTTTGGAAAATCCACAGGAATGGGTAGGACAAGTGGAAATAAGTGCCC	4	-	146305768-146305799:146312272-146312289	4q31.22a	Homo sapiens OTU domain containing 4 (OTUD4), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	HSHIN1; KIAA1046; DKFZp434I0721; HIN1	HSHIN1; KIAA1046; DKFZp434I0721; HIN1
Homo sapiens	RefSeq	NM_202468.1	ILMN_21354	GIPC1	NM_202468.1	NM_202468.1		10755	42544143	NM_202468.1	GIPC1	NP_974197.1	ILMN_1796177	0006380427	A	1682	CCCTCCCTGTGGAGCCTGTTACCTCCGCATTTGACACGAGTCTGCTGTGA	19	-	14588712-14588761	19p13.12c	Homo sapiens GIPC PDZ domain containing family, member 1 (GIPC1), transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9770488] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9770488] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [pmid 12857860] [evidence IDA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence ISS]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 12857860] [evidence IDA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IEA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Protrusion from a dendrite. Spines are specialised subcellular compartments involved in the synaptic transmission. They are linked to the dendritic shaft by a restriction. Because of their bulb shape, they function as a biochemical and an electrical compartment. Spine remodeling is though to be involved in synaptic plasticity [goid 43197] [evidence IEA]; Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines [goid 43198] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9770488] [evidence NAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [evidence ISS]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32435] [evidence ISS]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The regulated release of glutamate by a cell or group of cells. The glutamate is the most abundant excitatory neurotransmitter in the nervous system [goid 14047] [evidence IEA]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 15459234] [evidence IPI]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	IIP-1; TIP-2; GLUT1CBP; C19orf3; RGS19IP1; Hs.6454; SYNECTIIN; MGC15889; NIP; MGC3774; SEMCAP; GIPC	IIP-1; TIP-2; GLUT1CBP; C19orf3; RGS19IP1; Hs.6454; SYNECTIIN; MGC15889; NIP; MGC3774; SEMCAP; GIPC
Homo sapiens	RefSeq	NM_181712.4	ILMN_164531	KANK4	NM_181712.4	NM_181712.4		163782	156104861	NM_181712.4	KANK4	NP_859063.3	ILMN_3241554	0003060364	S	5378	GGTCCTGGGAGATGCTGATGCTATCGAGCCACAACCACACTTTGAGTAGC	1	-	62701886-62701935	1p31.3d	Homo sapiens KN motif and ankyrin repeat domains 4 (KANK4), mRNA.				dJ1078M7.1; ANKRD38; FLJ10884; KIAA0172; RP5-1155K23.5	dJ1078M7.1; ANKRD38; FLJ10884; KIAA0172; RP5-1155K23.5
Homo sapiens	RefSeq	NM_001102657.1	ILMN_347985	ZNF836	NM_001102657.1	NM_001102657.1		162962	156627572	NM_001102657.1	ZNF836	NP_001096127.1	ILMN_3244836	0007050646	S	2866	GAATGTGGCAAGGTCTTTCGTCATCAATCAACACTAGCACGTCATCGGAG	19	-	57350354-57350403	19q13.33e	Homo sapiens zinc finger protein 836 (ZNF836), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001008895.1	ILMN_29540	CUL4A	NM_001008895.1	NM_001008895.1		8451	57165423	NM_001008895.1	CUL4A	NP_001008895.1	ILMN_1686156	0006580192	I	106	CCAAGCCGGGGGGCGCGGGCGGCTCCAAGAAGCTGGTCATCAAGAACTTC	13	+	112912037-112912086	13q34d	Homo sapiens cullin 4A (CUL4A), transcript variant 1, mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 8681378] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8681378] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8681378] [evidence TAS]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [pmid 8681378] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12504025] [evidence IPI]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]		
Homo sapiens	RefSeq	XM_934307.1	ILMN_43452	LOC126661	XM_945899.2	XM_945899.2		126661	113412054	XM_945899.2	LOC126661	XP_950992.1	ILMN_1663791	0002750524	A	783	GGAGCACCCTTTCTAACCTGGAGCCCAGCATCTTTCAGCTCCATGCCCAG				1p34.1b	PREDICTED: Homo sapiens hypothetical protein LOC126661, transcript variant 6 (LOC126661), mRNA.					
Homo sapiens	RefSeq	XM_001721071.1	ILMN_347049	LOC100133829	XM_001721071.1	XM_001721071.1		100133829	169209334	XM_001721071.1	LOC100133829	XP_001721123.1	ILMN_3245199	0002690301	S	88	ACGGCATCTGTAAGAACGTGGGGCTGTGACTTTGAGATTGACTCTGGCAC					PREDICTED: Homo sapiens similar to hCG1991431 (LOC100133829), mRNA.					
Homo sapiens	RefSeq	XR_039179.1	ILMN_334342	LOC100129934	XR_039179.1	XR_039179.1		100129934	169169028	XR_039179.1	LOC100129934		ILMN_3252395	0006590128	M	263	CTTGTGTAGGGGCACTCAGAATGGTCCAGCATTTGACATACCATCATAGG				6p21.1d	PREDICTED: Homo sapiens misc_RNA (LOC100129934), miscRNA.					
Homo sapiens	RefSeq	NM_005665.4	ILMN_17996	EVI5	NM_005665.4	NM_005665.4		7813	68299758	NM_005665.4	EVI5	NP_005656.4	ILMN_1746314	0004540176	S	6532	CCTGTGAAAGAATAACCACTGCACTCCAACCTGGGCAACATGGCAAGACC	1	-	92975365-92975414	1p22.1d-p22.1c	Homo sapiens ecotropic viral integration site 5 (EVI5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9618176] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9618176] [evidence TAS]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16439210] [evidence IPI]	NB4S	NB4S
Homo sapiens	RefSeq	NM_020038.1	ILMN_24096	ABCC3	NM_020038.1	NM_020038.1		8714	9955973	NM_020038.1	ABCC3	NP_064422.1	ILMN_1717466	0000060114	I	747	TGCTAAACCCTGACCCTCTGCGGGGCTGCCTGCCGGGCTTCACCTCCCCC	17	+	46091544-46091593	17q21.33b	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 3 (ABCC3), transcript variant MRP3B, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9813153] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9813153] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9813153] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9813153] [evidence TAS]; Catalysis of the transfer of organic anions from one side of a membrane to the other. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 8514] [pmid 9738950] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 9813153] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	cMOAT2; MRP3; MLP2; ABC31; MOAT-D; EST90757	cMOAT2; MRP3; MLP2; ABC31; MOAT-D; EST90757
Homo sapiens	RefSeq	XM_927318.1	ILMN_33506	LOC644088	XM_927318.1	XM_927318.1		644088	88954208	XM_927318.1	LOC644088	XP_932411.1	ILMN_1716533	0005690593	S	945	CCCTCAAGCAGAACAGCAGTGGCATCGGAATAATGTCAAAGGCGCCAGTG	2	+	240943736-240943785		PREDICTED: Homo sapiens similar to K08H10.2a (LOC644088), mRNA.					
Homo sapiens	RefSeq	NM_177969.2	ILMN_29298	PPM1B	NM_177969.2	NM_177969.2		5495	75813616	NM_177969.2	PPM1B	NP_808908.1	ILMN_2377210	0001850228	A	311	AGCGGCGGCTGAGTCAGGGTCGCGCCTCCGTTGGAAACTTGGGCTGAGTA	2	+	44249814-44249863	2p21d	Homo sapiens protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform (PPM1B), transcript variant 3, mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9684878] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 9684878] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	MGC21657; PP2CB; PP2C-beta-X; PPC2BETAX; PP2CBETA	PPC2BETAX; MGC21657; PP2CB; PP2C-beta-X; PP2CBETA
Homo sapiens	RefSeq	XM_929278.1	ILMN_37716	LOC653729	XM_929278.1	XM_929278.1		653729	88961746	XM_929278.1	LOC653729	XP_934371.1	ILMN_1723332	0006040674	S	142	CCAGGCGGCCAGGACCCCGGAGCGAGCGGATGGGAGCCGCCACCTGTAGG	3	-	46828789-46828838		PREDICTED: Homo sapiens similar to testis serine protease 3 (LOC653729), mRNA.					
Homo sapiens	RefSeq	NM_198709.1	ILMN_27054	ARSB	NM_198709.1	NM_198709.1		411	38569406	NM_198709.1	ARSB	NP_942002.1	ILMN_1668727	0000150546	I	1639	AGAAATGACTTCAGACCCAAGGTTCTGAAAGGGCCCCTCAAGGCCTCGGG	5	-	78147573-78147622	5q14.1c	Homo sapiens arylsulfatase B (ARSB), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 2303452] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [pmid 1718978] [evidence TAS]; The directed movement of substances into, out of or within a lysosome [goid 7041] [pmid 2303452] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate [goid 3943] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 2303452] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MPS6; ASB; G4S	MPS6; ASB; G4S
Homo sapiens	RefSeq	XM_927368.1	ILMN_35793	LOC653428	XM_927368.1	XM_927368.1		653428	88943802	XM_927368.1	LOC653428	XP_932461.1	ILMN_1712188	0000580095	S	1481	TCCTGCGTCACCACCCGTCAGAAGGAGCCGCCACGTTTGATTTCTCCAGT	1	-	221805677-221805726	1q41e	PREDICTED: Homo sapiens similar to BTB (POZ) domain containing 14A (LOC653428), mRNA.					
Homo sapiens	RefSeq	NM_001938.2	ILMN_182864	DR1	NM_001938.2	NM_001938.2		1810	45006969	NM_001938.2	DR1	NP_001929.1	ILMN_1759983	0004890706	S	2638	ACTTATGTATTCACCAAGCCCAAAAATAGATTGTGGCTCCCAGGATTCCA	1	+	93600166-93600215	1p22.1b	Homo sapiens down-regulator of transcription 1, TBP-binding (negative cofactor 2) (DR1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8670811] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8670811] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 1339312] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	NC2-BETA; NC2	NC2-BETA; NC2
Homo sapiens	RefSeq	NM_033161.2	ILMN_1760	SURF4	NM_033161.2	NM_033161.2		6836	19593984	NM_033161.2	SURF4	NP_149351.1	ILMN_1690761	0003370048	S	2525	TCAACCTCACCAGGGCTGTCTCTTGGTCCACACCTCGCTCCCTGTTAGTG	9	-	136228734-136228783	9q34.2a	Homo sapiens surfeit 4 (SURF4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ22993; ERV29; MGC102753	FLJ22993; ERV29; MGC102753
Homo sapiens	RefSeq	NM_001031680.1	ILMN_8960	RUNX3	NM_001031680.2	NM_001031680.2		864	110735399	NM_001031680.2	RUNX3	NP_001026850.1	ILMN_1751839	0006040360	I	442	GGCATCGAACAGCATCTTCGACTCCTTCCCGACCTACTCGCCGACCTTCA	1	-	25291010-25291059	1p36.11c	Homo sapiens runt-related transcription factor 3 (RUNX3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7622058] [evidence NAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7607690] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence NAS]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence ISS]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7607690] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9751710] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 7835892] [evidence NAS]	FLJ34510; MGC16070; PEBP2aC; CBFA3; AML2	PEBP2aC; CBFA3; AML2
Homo sapiens	RefSeq	NM_152699.2	ILMN_24031	SENP5	NM_152699.3	NM_152699.3		205564	142363621	NM_152699.3	SENP5	NP_689912.1	ILMN_1675501	0000290315	S	2405	ACATGCCCCGAGTGCGGAAGAGGATTTACAAGGAGCTATGTGAGTGCCGG	3	+	198142129-198142178	3q29g	Homo sapiens SUMO1/sentrin specific peptidase 5 (SENP5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	MGC27076; FLJ42398	MGC27076; FLJ42398
Homo sapiens	RefSeq	NM_031294.2	ILMN_8796	LRRC48	NM_031294.2	NM_031294.2		83450	33636688	NM_031294.2	LRRC48	NP_112584.2	ILMN_2353862	0001230162	A	1709	GCGCGTGAAGGAGATCAATCAGTACATCGACCACATGCAGAGCGAACTGG	17	+	17860629-17860678	17p11.2g	Homo sapiens leucine rich repeat containing 48 (LRRC48), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZP586M1120	DKFZP586M1120
Homo sapiens	RefSeq	NM_031294.2	ILMN_8796	LRRC48	NM_031294.2	NM_031294.2		83450	33636688	NM_031294.2	LRRC48	NP_112584.2	ILMN_1693762	0002510670	I	1427	TCAGTGCCGGGACCTGGAGAATCACCACCACGAGAAGCTCCTGGAGATCT	17	+	17851069-17851118	17p11.2g	Homo sapiens leucine rich repeat containing 48 (LRRC48), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZP586M1120	DKFZP586M1120
Homo sapiens	RefSeq	NM_002141.4	ILMN_9899	HOXA4	NM_002141.4	NM_002141.4		3201	148613881	NM_002141.4	HOXA4	NP_002132.3	ILMN_3251370	0000450142	S	622	CCGTGGTGTACCCCTGGATGAAGAAGATCCATGTCAGCGCCGTTAACCCC	7	-	27169182-27169190:27169737-27169777	7p15.2a	Homo sapiens homeobox A4 (HOXA4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 1675427] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX1D; HOX1	HOX1D; HOX1
Homo sapiens	RefSeq	NM_002141.2	ILMN_9899	HOXA4	NM_002141.4	NM_002141.4		3201	148613881	NM_002141.4	HOXA4	NP_002132.3	ILMN_1677018	0007160553	S	1213	GGATGCTGGCTGGTGGAACAACCTGCTGGCCCGAAACAAGGCTGCCAGGT	7	-	27168591-27168640	7p15.2a	Homo sapiens homeobox A4 (HOXA4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 1675427] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX1D; HOX1	HOX1D; HOX1
Homo sapiens	RefSeq	NM_032026.1	ILMN_17501	TATDN1	NM_032026.2	NM_032026.2		83940	141803186	NM_032026.2	TATDN1	NP_114415.1	ILMN_1701058	0002750592	S	523	CGGTGTGTAGGGGGAGTGGTGCATTCATTTGATGGTACCAAGGAAGCAGC	8	-	125585737-125585769:125589896-125589912	8q24.13d	Homo sapiens TatD DNase domain containing 1 (TATDN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters [goid 16888] [evidence IEA]	CDA11	CDA11
Homo sapiens	RefSeq	XM_933654.1	ILMN_38750	LOC442590	XM_933654.1	XM_933654.1		442590	89025157	XM_933654.1	LOC442590	XP_938747.1	ILMN_1684897	0001170731	A	663	CCACTTCCTGTATGGGAAGAACCGCTCTCGCATACCCTTGCTCCGTAAGC	7	+	74968676-74968725	7q11.23d	PREDICTED: Homo sapiens similar to Williams Beuren syndrome chromosome region 19, transcript variant 4 (LOC442590), mRNA.					
Homo sapiens	RefSeq	NM_001013436.1	ILMN_2676	MPST	NM_021126.4	NM_021126.4		4357	61835207	NM_021126.4	MPST	NP_066949.2	ILMN_1800096	0007550735	A	1097	TGTCATCTCAGAGGGCCGGGGGAAGACCCACTGAAGCTGGGCAGGACACA	22	+	35755468-35755501:35755502-35755517	22q12.3d	Homo sapiens mercaptopyruvate sulfurtransferase (MPST), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid [goid 9440] [pmid 9070219] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 9070219] [evidence TAS]	Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [pmid 9070219] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3-mercaptopyruvate + cyanide = pyruvate + thiocyanate [goid 16784] [evidence IEA]	MGC24539; TST2; MST	MGC24539; TST2; MST
Homo sapiens	RefSeq	NM_018255.1	ILMN_5596	ELP2	NM_018255.1	NM_018255.1		55250	8922734	NM_018255.1	ELP2	NP_060725.1	ILMN_1709132	0004280129	S	2184	CTGTCAGCGTCTGCCCAGTGCTCCACCCTTCTCAACGATACGTGGTTGCA	18	+	32004121-32004157:32005008-32005020	18q12.2a	Homo sapiens elongation protein 2 homolog (S. cerevisiae) (ELP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [pmid 11714725] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 11714725] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11714725] [evidence IDA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule catalyzed by RNA polymerase II following transcription initiation [goid 16944] [pmid 11714725] [evidence IC ]	SHINC-2; ELP2; StIP; FLJ10879; STATIP1	SHINC-2; ELP2; StIP; FLJ10879; STATIP1
Homo sapiens	RefSeq	NM_006402.2	ILMN_14557	HBXIP	NM_006402.2	NM_006402.2		10542	38788352	NM_006402.2	HBXIP	NP_006393.2	ILMN_2220518	0006860653	S	527	ATGATCCAGAAACACGATGGCATCACGGTGGCAGTGCACAAAATGGCCTC	1	-	110944148-110944197	1p13.3a	Homo sapiens hepatitis B virus x interacting protein (HBXIP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12773388] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12773388] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9499022] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 9499022] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 12773388] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12773388] [evidence IPI]	MGC71071; XIP	MGC71071; XIP
Homo sapiens	RefSeq	NM_006402.2	ILMN_14557	HBXIP	NM_006402.2	NM_006402.2		10542	38788352	NM_006402.2	HBXIP	NP_006393.2	ILMN_1795779	0003800026	S	126	GCGACGGAAGCGCAGTGATGTTTTCCAGTAAAGAACGCGGACGTTGCACC	1	-	110950371-110950420	1p13.3a	Homo sapiens hepatitis B virus x interacting protein (HBXIP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12773388] [evidence IDA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12773388] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9499022] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 9499022] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 12773388] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12773388] [evidence IPI]	MGC71071; XIP	MGC71071; XIP
Homo sapiens	RefSeq	NM_012139.2	ILMN_8581	SERGEF	NM_012139.2	NM_012139.2		26297	40548400	NM_012139.2	SERGEF	NP_036271.1	ILMN_1760049	0006580437	S	1205	AAAGCCGGTGCAGGCTCTGCTGTCATCGTCAGGACTCCTTGTGGGCTGTG	11	-	17984815-17984864	11p15.1d	Homo sapiens secretion regulating guanine nucleotide exchange factor (SERGEF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10571079] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10571079] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10571079] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50709] [pmid 12459492] [evidence IDA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Ran family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5087] [pmid 10571079] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12459492] [evidence IPI]	Gnefr; DELGEF	Gnefr; DELGEF
Homo sapiens	RefSeq	NM_017439.1	ILMN_176075	LOC54103	NM_017439.1	NM_017439.1		54103	65301413	NM_017439.1	LOC54103	NP_059135.1	ILMN_1772064	0005810450	S	2131	CTGAGGAGACTGGGTGGAGGGTACATTGCATCTCTCTCTAGTATCGCTGC	7	-	76796879-76796928	7q11.23g	Homo sapiens hypothetical protein LOC54103 (LOC54103), mRNA.				DKFZp667B242; MGC126548	DKFZp667B242; MGC126548
Homo sapiens	RefSeq	XM_927491.1	ILMN_42102	LOC644326	XM_927491.1	XM_927491.1		644326	88984898	XM_927491.1	LOC644326	XP_932584.1	ILMN_1653864	0006400037	S	2	TGGCTGGAATAACATGCATAGAATTCAGAATCCGGATGGCAAAGAAGATC	5	-	119287130-119287179		PREDICTED: Homo sapiens hypothetical protein LOC644326 (LOC644326), mRNA.					
Homo sapiens	RefSeq	XM_059037.7	ILMN_40905	WTIP	XM_059037.7	XM_059037.7		126374	89056764	XM_059037.7	WTIP	XP_059037.5	ILMN_1801223	0001230270	A	2081	TGTGTCTGCGCGCGGGGCAAGGGGCTCCACGACAAAAGGACAAGATTTGA	19	+	39683802-39683851	19q13.11c	PREDICTED: Homo sapiens Wilms tumor 1 interacting protein (WTIP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_004805.2	ILMN_24243	POLR2D	NM_004805.2	NM_004805.2		5433	14589949	NM_004805.2	POLR2D	NP_004796.1	ILMN_1792672	0006900025	S	1508	GCCAAAGAGGTCCACAACCAGGTGTGCACTGTTCACTGCAGCCCATTTGC	2	-	128321052-128321101	2q14.3e	Homo sapiens polymerase (RNA) II (DNA directed) polypeptide D (POLR2D), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12676794] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9409616] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 9528765] [evidence IDA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 9528765] [evidence IMP]	HSRPB4; RBP4; HSRBP4	HSRPB4; RBP4; HSRBP4
Homo sapiens	RefSeq	XM_001713759.1	ILMN_336644	LOC100130477	XM_001713759.1	XM_001713759.1		100130477	169211594	XM_001713759.1	LOC100130477	XP_001713811.1	ILMN_3237022	0003840209	S	138	GGGACCCCAGAGGAGCTCTATGAGGGGACCTTGGGCAAGTACAATGTCAA					PREDICTED: Homo sapiens hypothetical protein LOC100130477 (LOC100130477), mRNA.					
Homo sapiens	Unigene	Hs.310740	ILMN_85839	HS.310740	Hs.310740		Hs.310740		5410062	AL041126			ILMN_1915629	0007380440	S	460	TTGCTTGTTATGTGGGTGTAGAGGGAGGCAAGCTAGAGAGAGGAAGAGGG	5	+	114550816-114550865		DKFZp434D0616_s1 434 (synonym: htes3) Homo sapiens cDNA clone DKFZp434D0616 3, mRNA sequence					
Homo sapiens	RefSeq	Hs.560153	ILMN_46221	CCDC122	NM_144974.3	NM_144974.3		160857	148596997	NM_144974.3	CCDC122	NP_659411.2	ILMN_1904052	0004590048	S	1896	ATATTTTACTCCATTTTCTCTTTTATCCAGAAGGTAACAATCATTTTTCT	13	-	44410551-44410600	13q14.11d-q14.11e	Homo sapiens coiled-coil domain containing 122 (CCDC122), mRNA.				FLJ31846	
Homo sapiens	RefSeq	NM_017921.1	ILMN_12904	NPLOC4	NM_017921.1	NM_017921.1		55666	8923608	NM_017921.1	NPLOC4	NP_060391.1	ILMN_1807600	0001470154	S	4022	AAGGAGGTCTCAGCCCCACCTCGCATCTTCACCTGCCCTTGGTGTGGACA	17	-	77134616-77134665	17q25.3f	Homo sapiens nuclear protein localization 4 homolog (S. cerevisiae) (NPLOC4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11574150] [evidence ISS]; The continuous network of membranes encompassing the outer nuclear membrane and the endoplasmic reticulum [goid 42175] [pmid 11574150] [evidence ISS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 11574150] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [pmid 11574150] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 11574150] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11574150] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20657; FLJ23742; NPL4; KIAA1499	FLJ20657; FLJ23742; NPL4; KIAA1499
Homo sapiens	RefSeq	NM_024935.2	ILMN_174937	KIAA1772	NM_024935.2	NM_024935.2		80000	40354206	NM_024935.2	KIAA1772	NP_079211.2	ILMN_1805177	0003390348	S	4652	CTCCTTCCAGTGGTCGACATGAGCACGGACTCCTAAACCTTTTCCACGCC	18	+	17342377-17342426	18q11.1e-q11.2a	Homo sapiens KIAA1772 (KIAA1772), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C18orf6	C18orf6
Homo sapiens	RefSeq	NM_000502.2	ILMN_9312	EPX	NM_000502.2	NM_000502.2		8288	65301165	NM_000502.2	EPX	NP_000493.1	ILMN_1772631	0003170438	S	1949	CAACATTGACATCTGGATTGGGGCCATCGCTGAGCCTCTTTTGCCGGGGG	17	+	53635562-53635611	17q22d	Homo sapiens eosinophil peroxidase (EPX), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [pmid 10386597] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	EPO; EPX-PEN; EPP	EPO; EPX-PEN; EPP
Homo sapiens	RefSeq	NM_001625.2	ILMN_1688	AK2	NM_001625.2	NM_001625.2		204	26665889	NM_001625.2	AK2	NP_001616.1	ILMN_1716053	0005720669	A	674	ATGCATCCCAGACCCCCGATGTCGTGTTCGCAAGCATCCTAGCAGCCTTC	1	-	33478820-33478869	1p35.1b	Homo sapiens adenylate kinase 2 (AK2), transcript variant AK2A, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 6182143] [evidence EXP]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [pmid 9504408] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate [goid 19206] [pmid 6182143] [evidence EXP]	ADK2	ADK2
Homo sapiens	RefSeq	NM_001625.2	ILMN_1688	AK2	NM_001625.2	NM_001625.2		204	26665889	NM_001625.2	AK2	NP_001616.1	ILMN_1670542	0001990491	I	789	CCATCCCTGTGAGGCAATGGGTGGGAATGATAGGACAGGCAAAGAGAAGC	1	-	33478705-33478754	1p35.1b	Homo sapiens adenylate kinase 2 (AK2), transcript variant AK2A, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 6182143] [evidence EXP]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [pmid 9504408] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate [goid 19206] [pmid 6182143] [evidence EXP]	ADK2	ADK2
Homo sapiens	RefSeq	XR_041761.1	ILMN_348143	FLJ30594	XR_041761.1	XR_041761.1		150622	169164066	XR_041761.1	FLJ30594		ILMN_3268232	0004250719	M	2864	CCTGCTAACAACTTCCCCTGTGGCATCAAACCAGTAGCCCATTTGCAGCT				2p25.2b	PREDICTED: Homo sapiens misc_RNA (FLJ30594), miscRNA.					
Homo sapiens	RefSeq	XR_041761.1	ILMN_348143	FLJ30594	XR_041761.1	XR_041761.1		150622	169164066	XR_041761.1	FLJ30594		ILMN_3191764	0004670209	A	2958	GCCTACAATCATAGAGGCTGCCAGCTGGGTTTCAAATGTGTATGTTCCAT				2p25.2b	PREDICTED: Homo sapiens misc_RNA (FLJ30594), miscRNA.					
Homo sapiens	RefSeq	XM_001718700.1	ILMN_349445	LOC100134655	XM_001718700.1	XM_001718700.1		100134655	169170355	XM_001718700.1	LOC100134655	XP_001718752.1	ILMN_3247039	0007050044	S	563	CCTCTCCGCTCCTCGTCAGGAGGAGGGAGAGCAACGGGACTTGCTGGTTG	7	-	40027829-40027878		PREDICTED: Homo sapiens hypothetical protein LOC100134655 (LOC100134655), mRNA.					
Homo sapiens	RefSeq	NM_144996.2	ILMN_3311	ARL13B	NM_144996.2	NM_144996.2		200894	33598957	NM_144996.2	ARL13B	NP_659433.2	ILMN_2403047	0004480722	A	2730	CTTGGAGTTTGTACATGGGACTTAGCAACCACACTGAGTGAGGTAAAAGC	3	+	93773585-93773634	3q11.2a	Homo sapiens ADP-ribosylation factor-like 13B (ARL13B), transcript variant 2, mRNA.		The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC120612; ARL2L1; DKFZp761H079; MGC120611; DKFZp686M2074; DKFZp686L2472; DKFZp686E2075	MGC120612; ARL2L1; DKFZp761H079; MGC120611; DKFZp686M2074; DKFZp686L2472; DKFZp686E2075
Homo sapiens	RefSeq	XM_001723921.1	ILMN_346795	LOC100131699	XM_001723921.1	XM_001723921.1		100131699	169188332	XM_001723921.1	LOC100131699	XP_001723973.1	ILMN_3289302	0000270041	M	360	CGGATTTGGCTGGACCTGCTGGTGCTGAGCATAAGAGATGAAGCCCACCT				10q23.1c	PREDICTED: Homo sapiens hypothetical protein LOC100131699 (LOC100131699), mRNA.					
Homo sapiens	RefSeq	NM_020411.1	ILMN_7953	XAGE1D	NM_020411.1	NM_020411.1		9503	9966898	NM_020411.1	XAGE1D	NP_065144.1	ILMN_1757427	0004490162	I	3	ACCTGGGAAGGAGCATAGGACAGGGCAAGGCGGGATAAGGAGGGGCACCA	X	-	52549968-52550017	Xp11.22b	Homo sapiens X antigen family, member 1D (XAGE1D), transcript variant 1, mRNA.				XAGE-1; GAGED2	XAGE-1; GAGED2
Homo sapiens	RefSeq	XM_937710.1	ILMN_41012	SEC11B	XM_937710.1	XM_937710.1		157708	89028706	XM_937710.1	SEC11B	XP_942803.1	ILMN_2196666	0002600717	S	1	ATGGAGGCAATGCTGGGCCGGCAAGGCAGCTTCCTCATCATCTTAAAGGA				8q11.23d-q12.1a	PREDICTED: Homo sapiens SEC11 homolog B (S. cerevisiae) (SEC11B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]		
Homo sapiens	RefSeq	NM_006237.2	ILMN_168171	POU4F1	NM_006237.3	NM_006237.3		5457	110347448	NM_006237.3	POU4F1	NP_006228.3	ILMN_1738691	0007400598	S	3392	GACCGTTTTGTGGCTAGTGCGATTTCACAGTCTACTGCCTGTTTCCACTG	13	-	79173602-79173651	13q31.1a	Homo sapiens POU class 4 homeobox 1 (POU4F1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8995448] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [pmid 8995448] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 8995448] [evidence TAS]; The orderly movement of cells that will reside in the hindbrain [goid 21535] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the peripheral nervous system [goid 48934] [evidence IEA]; The series of events during equilibrioception by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception plays an important role in the ability of an organism to perceive its orientation with respect to gravity [goid 51355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8995448] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	RDC-1; Oct-T1; BRN3A; FLJ13449	RDC-1; BRN3A; FLJ13449
Homo sapiens	RefSeq	XM_001720981.1	ILMN_345085	LOC100130824	XM_001720981.1	XM_001720981.1		100130824	169171490	XM_001720981.1	LOC100130824	XP_001721033.1	ILMN_3188151	0004560414	A	574	GGTGCAATTATGGCTCACTGCAGCCTCAACCTCCTGGGCTCAAGTAATCC					PREDICTED: Homo sapiens hypothetical protein LOC100130824 (LOC100130824), mRNA.					
Homo sapiens	RefSeq	NM_001127389.1	ILMN_364469	LOC653545	NM_001127389.1	NM_001127389.1		653545	188497733	NM_001127389.1	LOC653545	NP_001120861.2	ILMN_3238910	0001440280	S	1474	GAGGCCCCGGGGGAGCTGGAGGCCTCGGAAGAGGCCGCCTCGCTGGAAGC	4	+	191000152-191000201	4q35.2d	Homo sapiens double homeobox, 4-like (LOC653545), mRNA.					
Homo sapiens	RefSeq	NM_001037165.1	ILMN_183459	FOXK1	NM_001037165.1	NM_001037165.1		221937	82546823	NM_001037165.1	FOXK1	NP_001032242.1	ILMN_2082244	0006860544	S	10765	GGATGTGAAGTTCTGGTCATGTCACCTTGCGTGTCTCACCCTGGAGGAGT	7	+	4776604-4776653	7p22.1d	Homo sapiens forkhead box K1 (FOXK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ14977; FOXK1L	FLJ14977; FOXK1L
Homo sapiens	RefSeq	XM_942582.1	ILMN_183459	FOXK1	NM_001037165.1	NM_001037165.1		221937	82546823	NM_001037165.1	FOXK1	NP_001032242.1	ILMN_1812893	0006380168	I	2104	AGAGCCCGAGGTCAAAAGGTCCCGGGTGGAGGAGCCCAGTGGGGCTGTAA	7	+	4765580-4765629	7p22.1d	Homo sapiens forkhead box K1 (FOXK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ14977; FOXK1L	
Homo sapiens	RefSeq	NM_006160.2	ILMN_29656	NEUROD2	NM_006160.2	NM_006160.2		4761	21314637	NM_006160.2	NEUROD2	NP_006151.2	ILMN_1702217	0007160451	S	1759	TAAAAACAGACACCCAGCTGCCGAGGCAAAAAGGAGCCAGGCGCTCCCTC	17	-	35014768-35014817	17q12c	Homo sapiens neurogenic differentiation 2 (NEUROD2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8816493] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8816493] [evidence TAS]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8816493] [evidence TAS]	NDRF	NDRF
Homo sapiens	RefSeq	NM_024854.3	ILMN_371845	PYROXD1	NM_024854.3	NM_024854.3		79912	209977012	NM_024854.3	PYROXD1	NP_079130.2	ILMN_3247826	0002120639	S	804	CTAAAGCAGATAATGTAGGAAGTGCATTGGGACCAGATTGGCATGAAGGC	12	+	21608956-21609005	12p12.1e	Homo sapiens pyridine nucleotide-disulphide oxidoreductase domain 1 (PYROXD1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	Unigene	Hs.580087	ILMN_132268	HS.580087	Hs.580087		Hs.580087		82860731	DR979660			ILMN_1842180	0000110475	S	146	GTGTACACCTGCAGCGGTATTGGGAGTAATATCATCCTTTCCCCACCTTG					SM014906 Placenta 3 EST Homo sapiens cDNA clone ID_14906 3', mRNA sequence					
Homo sapiens	RefSeq	NM_032044.2	ILMN_8328	REG4	NM_032044.2	NM_032044.2		83998	36054181	NM_032044.2	REG4	NP_114433.1	ILMN_2169383	0006590438	S	619	GGTCTGGCAAGTCCATGGGTGGGAACAAGCACTGTGCTGAGATGAGCTCC	1	-	120142649-120142698	1p12a	Homo sapiens regenerating islet-derived family, member 4 (REG4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	GISP; RELP; REG-IV	GISP; RELP; REG-IV
Homo sapiens	RefSeq	XM_928491.1	ILMN_31510	LOC645459	XM_928491.1	XM_928491.1		645459	89031344	XM_928491.1	LOC645459	XP_933584.1	ILMN_1671456	0006180435	S	121	GTGGTGCCACAGTGTGTCACCTGCCGGCAGCACAATGCTAGGCAAGGTCC	10	+	73373755-73373804		PREDICTED: Homo sapiens hypothetical protein LOC645459 (LOC645459), mRNA.					
Homo sapiens	RefSeq	NM_030927.1	ILMN_14962	TSPAN14	NM_030927.1	NM_030927.1		81619	13569888	NM_030927.1	TSPAN14	NP_112189.1	ILMN_1785060	0006220278	S	2272	CCCTGGGGATAGCTGGGGCATTTGTCTAGCTGGGCTACCTTCTAACACTT	10	+	82269093-82269142	10q23.1a	Homo sapiens tetraspanin 14 (TSPAN14), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC11352; TM4SF14; DC-TM4F2	MGC11352; TM4SF14; DC-TM4F2
Homo sapiens	RefSeq	NM_000124.1	ILMN_20934	ERCC6	NM_000124.1	NM_000124.1		2074	4557564	NM_000124.1	ERCC6	NP_000115.1	ILMN_1786882	0000520168	S	4350	ACGATGACCTTCTGGTGGAGATGAGAAACTTCATCGCTTTCCAGGCCCAC	10	-	50337028-50337077	10q11.23a	Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 6 (ERCC6), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 16916636] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12560492] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16107709] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 16107709] [evidence IDA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [pmid 9326587] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IEA]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [pmid 10564257] [evidence IMP]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [pmid 16916636] [evidence IMP]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 9973627] [evidence IMP]; The repair of UV-induced T-T, C-T and C-C dimers [goid 6290] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7664335] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 16107709] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase kinase (JNKK) activity in response to phosphorylation by a member of the JUN kinase kinase kinase (JNKKK) family, or another upstream kinase. JNKKs are involved in a signaling pathway that is primarily activated by cytokines and exposure to environmental stress [goid 7256] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of RNA elongation, the extension of an RNA molecule after transcription initiation by the addition of ribonucleotides catalyzed by an RNA polymerase [goid 32786] [pmid 9326587] [evidence IDA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 16107709] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 12560492] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8999876] [evidence IDA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 8999876] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 16916636] [evidence IDA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [pmid 9326587] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16107709] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12560492] [evidence IDA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 16246722] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 12560492] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 8999876] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 16107709] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 16916636] [evidence IDA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 7664335] [evidence IPI]	CSB; COFS1; COFS; ARMD5; RAD26; CKN2	CSB; COFS1; COFS; ARMD5; RAD26; CKN2
Homo sapiens	RefSeq	NM_018367.3	ILMN_3836	PHCA	NM_018367.4	NM_018367.4		55331	141802267	NM_018367.4	PHCA	NP_060837.2	ILMN_1812552	0001230017	S	3174	GGATTCTAGGTGGACATTACAGAGTTGAATTCCTCACTACCCCCTCCCGC	11	+	76411321-76411370	11q13.5c	Homo sapiens phytoceramidase, alkaline (PHCA), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	FLJ11238; APHC	FLJ11238; APHC
Homo sapiens	RefSeq	XM_927495.1	ILMN_176153	KRTAP4-8	XM_001130340.1	XM_001130340.1		83898	113427418	XM_001130340.1	KRTAP4-8	XP_001130340.1	ILMN_1684885	0003870240	S	588	AGCCCACTGCCCTGGCTCATCTCTCCCTTCGCCGCTGGTCCACAAATGTA					PREDICTED: Homo sapiens keratin associated protein 4-8, transcript variant 2 (KRTAP4-8), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]				
Homo sapiens	RefSeq	NM_000462.2	ILMN_26586	UBE3A	NM_000462.2	NM_000462.2		7337	19718765	NM_000462.2	UBE3A	NP_000453.2	ILMN_2391141	0002360379	A	4332	CATGGGGTTTTTCTGGGCCAGCCTTTAGAACACTGTTAGGGTACATACGC	15	-	25582530-25582579	15q11.2e	Homo sapiens ubiquitin protein ligase E3A (UBE3A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8221889] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8221889] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 8988171] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16493710] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	EPVE6AP; AS; FLJ26981; ANCR; HPVE6A; E6-AP	EPVE6AP; AS; FLJ26981; ANCR; HPVE6A; E6-AP
Homo sapiens	RefSeq	NM_130839.1	ILMN_26586	UBE3A	NM_000462.2	NM_000462.2		7337	19718765	NM_000462.2	UBE3A	NP_000453.2	ILMN_1764549	0001990307	A	4395	GGGACCTTCGTGCAACTGTAGTCATCTTAAAGGCTTCTCATCCACTGTGC	15	-	25582467-25582516	15q11.2e	Homo sapiens ubiquitin protein ligase E3A (UBE3A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8221889] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8221889] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 8988171] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16493710] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	EPVE6AP; AS; FLJ26981; ANCR; HPVE6A; E6-AP	EPVE6AP; AS; FLJ26981; ANCR; HPVE6A; E6-AP
Homo sapiens	RefSeq	NM_001007525.1	ILMN_173488	NWD1	NM_001007525.1	NM_001007525.1		284434	56090534	NM_001007525.1	NWD1	NP_001007526.1	ILMN_1721540	0006280592	S	8184	GCTACTCTTTGCCACTGCTTCTCTGTGAATCAAGGGCTTACCCAATGCAG	19	+	16789555-16789604	19p13.11f-p13.11e	Homo sapiens NACHT and WD repeat domain containing 1 (NWD1), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC134940	
Homo sapiens	RefSeq	NM_018406.3	ILMN_164899	MUC4	NM_018406.3	NM_018406.3		4585	112382234	NM_018406.3	MUC4	NP_060876.3	ILMN_2246555	0004900014	I	3462	GCAGTGCTACCTCAGCTTCCACAGTATCCTCGGACTCCCCTCTGAAGATG	3	-	196990100-196990105:196990440-196990483	3q29e-q29f	Homo sapiens mucin 4, cell surface associated (MUC4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10920259] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10024507] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10920259] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [pmid 10024507] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions as a lubricant for an extracellular matrix, such as a mucous membrane [goid 30197] [pmid 10920259] [evidence NAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	HSA276359	HSA276359
Homo sapiens	RefSeq	NM_004532.2	ILMN_164899	MUC4	NM_018406.3	NM_018406.3		4585	112382234	NM_018406.3	MUC4	NP_060876.3	ILMN_1727314	0005260746	A	433	GGGAGCCAGGGGGACTTTTGCCGCAGCCATGAAGGGGGCACGCTGGAGGA	3	-	197023063-197023085:197023086-197023112	3q29e-q29f	Homo sapiens mucin 4, cell surface associated (MUC4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10920259] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10024507] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10920259] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [pmid 10024507] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions as a lubricant for an extracellular matrix, such as a mucous membrane [goid 30197] [pmid 10920259] [evidence NAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	HSA276359	mucin 4; HSA276359
Homo sapiens	RefSeq	NM_018406.3	ILMN_164899	MUC4	NM_018406.3	NM_018406.3		4585	112382234	NM_018406.3	MUC4	NP_060876.3	ILMN_2321153	0000110471	A	7030	GCGCCATTGCTTTTGGGAGACTGGAAAAGGGAAGGTGACTGAAGGCTGTC	3	-	196959593-196959642	3q29e-q29f	Homo sapiens mucin 4, cell surface associated (MUC4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10920259] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10024507] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10920259] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [pmid 10024507] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions as a lubricant for an extracellular matrix, such as a mucous membrane [goid 30197] [pmid 10920259] [evidence NAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	HSA276359	HSA276359
Homo sapiens	RefSeq	XM_936261.1	ILMN_164899	MUC4	NM_018406.3	NM_018406.3		4585	112382234	NM_018406.3	MUC4	NP_060876.3	ILMN_1792039	0004260450	A	416	GCCGTGGAGCTTCCCCAGGGAGCCAGGGGGACTTTTGCCGCAGCCATGAA	3	-	197023080-197023085:197023086-197023129	3q29e-q29f	Homo sapiens mucin 4, cell surface associated (MUC4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10920259] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10024507] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10920259] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]	Interacting selectively with the protein-tyrosine kinase receptor Neu/ErbB-2/HER2 [goid 5176] [pmid 10024507] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions as a lubricant for an extracellular matrix, such as a mucous membrane [goid 30197] [pmid 10920259] [evidence NAS]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	HSA276359	
Homo sapiens	RefSeq	NM_181696.1	ILMN_18066	PRDX1	NM_181696.1	NM_181696.1		5052	32455263	NM_181696.1	PRDX1	NP_859047.1	ILMN_2366391	0006250280	A	819	CATGGGGAAGTGTGCCCAGCTGGCTGGAAACCTGGCAGTGATACCATCAA	1	-	45977046-45977086:45980179-45980187	1p34.1b	Homo sapiens peroxiredoxin 1 (PRDX1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17603937] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17603937] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8089076] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8089076] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [pmid 11986303] [evidence IDA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17909037] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	MSP23; PAG; PAGB; PAGA; PRX1; NKEFA; TDPX2	MSP23; PAG; PAGB; PAGA; PRX1; NKEFA; TDPX2
Homo sapiens	RefSeq	NM_181696.1	ILMN_18066	PRDX1	NM_181696.1	NM_181696.1		5052	32455263	NM_181696.1	PRDX1	NP_859047.1	ILMN_2366388	0006180446	A	897	TTCTCCAAGCAGAAGTGAGCGCTGGGCTGTTTTAGTGCCAGGCTGCGGTG	1	-	45976968-45977000:45977001-45977017	1p34.1b	Homo sapiens peroxiredoxin 1 (PRDX1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17603937] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17603937] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8089076] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8089076] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [pmid 11986303] [evidence IDA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17909037] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	MSP23; PAG; PAGB; PAGA; PRX1; NKEFA; TDPX2	MSP23; PAG; PAGB; PAGA; PRX1; NKEFA; TDPX2
Homo sapiens	RefSeq	NM_014484.3	ILMN_16843	MOCS3	NM_014484.3	NM_014484.3		27304	31652257	NM_014484.3	MOCS3	NP_055299.1	ILMN_1766652	0006900397	S	2367	ACTTGCTTTGGAATTTTCAAGTCAAAGTCCCAACCCTTTGCCTCTCCCCC	20	+	49011136-49011185	20q13.13f	Homo sapiens molybdenum cofactor synthesis 3 (MOCS3), mRNA.		The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBA4; MGC9252; dJ914P20.3	UBA4; MGC9252; dJ914P20.3
Homo sapiens	RefSeq	NM_024012.1	ILMN_27138	HTR5A	NM_024012.2	NM_024012.2		3361	91807129	NM_024012.2	HTR5A	NP_076917.1	ILMN_1721147	0002470343	S	792	CCGAAGCTGTGGAGGTGAAGGACTCTGCCAAACAGCCCCAGATGGTGTTC	7	+	154494270-154494283:154506798-154506833	7q36.2c	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 5A (HTR5A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7988681] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7988681] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 7988681] [evidence TAS]	MGC138226; 5-HT5A	MGC138226; 5-HT5A
Homo sapiens	RefSeq	NM_021077.3	ILMN_174851	NMB	NM_021077.3	NM_021077.3		4828	45505142	NM_021077.3	NMB	NP_066563.2	ILMN_2347592	0005670594	A	673	GTCATGATCTGCTCGGAATCCTCCTGCTAAAGAAGGCTCTGGGCGTGAGC	15	-	85200433-85200482	15q25.2b-q25.3a	Homo sapiens neuromedin B (NMB), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 2458345] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2458345] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2458345] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 2458345] [evidence TAS]	MGC2277; MGC3936; MGC17211	MGC2277; MGC3936; MGC17211
Homo sapiens	RefSeq	NM_003757.1	ILMN_25199	EIF3I	NM_003757.2	NM_003757.2		8668	83281439	NM_003757.2	EIF3I	NP_003748.1	ILMN_1671291	0002710068	S	953	ATCCTGATGGCAAGAGCTACAGCAGCGGCGGCGAAGATGGTTACGTCCGT	1	+	32469192-32469207:32469303-32469336	1p35.1b	Homo sapiens eukaryotic translation initiation factor 3, subunit I (EIF3I), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex [goid 5852] [pmid 8995409] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 8995409] [evidence TAS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14688252] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	EIF3S2; TRIP-1; eIF3-beta; TRIP1; eIF3i; eIF3-p36; PRO2242	TRIP-1; eIF3-beta; TRIP1; eIF3-p36; PRO2242
Homo sapiens	RefSeq	NM_013308.2	ILMN_21194	GPR171	NM_013308.2	NM_013308.2		29909	31377771	NM_013308.2	GPR171	NP_037440.2	ILMN_1721672	0004490397	S	1563	CCATGTAAGTTACCAGAAAGCCCACCAGCAACATAATTTTAAAGCCTTTC	3	-	152398482-152398531	3q25.1b	Homo sapiens G protein-coupled receptor 171 (GPR171), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9370294] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9370294] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	H963	H963
Homo sapiens	RefSeq	NM_000036.1	ILMN_2146	AMPD1	NM_000036.1	NM_000036.1		270	4557310	NM_000036.1	AMPD1	NP_000027.1	ILMN_1759312	0006660114	S	2229	CCGGAGGACAAATGTAGCCCAAATCCGCATGGCCTATCGCTATGAAACCT	1	-	115215784-115215833	1p13.2a	Homo sapiens adenosine monophosphate deaminase 1 (isoform M) (AMPD1), mRNA.		The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [evidence IEA]; Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [pmid 644316] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MADA; MAD	MADA; MAD
Homo sapiens	RefSeq	NM_194282.1	ILMN_26192	LIN54	NM_194282.1	NM_194282.1		132660	34996482	NM_194282.1	LIN54	NP_919258.1	ILMN_1724062	0003440301	S	5590	CTGAAGCACTAAACACAACCTGTAGGTCTTATCTCTGGGGTCTGGGAAAC	4	-	84065267-84065316	4q21.22a	Homo sapiens lin-54 homolog (C. elegans) (LIN54), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		DKFZp686L1814; JC8.6; CXCDC1; MGC129905; MIP120	DKFZp686L1814; JC8.6; CXCDC1; MGC129905; MIP120
Homo sapiens	RefSeq	NM_004297.2	ILMN_11087	GNA14	NM_004297.2	NM_004297.2		9630	31542850	NM_004297.2	GNA14	NP_004288.1	ILMN_1686227	0002340608	S	1563	GGGAATTCAACCTTGTCTAAAAGCTGCTGCCCACTCCTCCCCTATAACAG	9	-	79228684-79228714:79228715-79228733	9q21.13c-q21.2a	Homo sapiens guanine nucleotide binding protein (G protein), alpha 14 (GNA14), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [pmid 1946421] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10191087] [evidence TAS]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10191087] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10191087] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10191087] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]		
Homo sapiens	RefSeq	NM_052813.2	ILMN_22365	CARD9	NM_052813.3	NM_052813.3		64170	146229336	NM_052813.3	CARD9	NP_434700.2	ILMN_1712532	0003710685	S	1969	GTGCTCACCACCCCCATGCACACGCCATCTGTGTAACTTCAGGATCTGTT	9	-	138378318-138378367	9q34.3d	Homo sapiens caspase recruitment domain family, member 9 (CARD9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11053425] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus [goid 9620] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan [goid 32495] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production [goid 32760] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade [goid 32874] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the stress-activated MAPK cascade [goid 32874] [pmid 17187069] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42534] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 11053425] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an exogenous double-stranded RNA stimulus [goid 43330] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45076] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45089] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45408] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [pmid 17187069] [evidence IDA]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [evidence IEA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11053425] [evidence IPI]; Interacting selectively with a CARD (N-terminal caspase recruitment) domain, a protein-protein interaction domain that belongs to the death domain-fold superfamily. These protein molecule families are similar in structure with each consisting of six or seven anti-parallel alpha-helices that form highly specific homophilic interactions between signaling partners. CARD exists in the N-terminal prodomains of several caspases and in apoptosis-regulatory proteins and mediates the assembly of CARD-containing proteins that participate in activation or suppression of CARD carrying members of the caspase family [goid 50700] [pmid 11053425] [evidence IPI]	hCARD9	hCARD9
Homo sapiens	Unigene	Hs.544782	ILMN_108124	HS.544782	Hs.544782		Hs.544782		3143636	AA968456			ILMN_1830602	0001990543	S	214	CACAGGTAGAATCAGAGCCGAAACTCCATCCAGGTCTCCAGCACCCAGGC	7_random	+	72496-72545		op49d12.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1580183 3, mRNA sequence					
Homo sapiens	RefSeq	XM_937325.1	ILMN_138131	LOC648271	XM_937325.1	XM_937325.1		648271	89037718	XM_937325.1	LOC648271	XP_942418.1	ILMN_1723407	0006250452	S	291	TCTACTGTTTGCAAAGTGTTACTACTGAAAAATATCCCTGAAACTGAGCT					PREDICTED: Homo sapiens hypothetical protein LOC648271 (LOC648271), mRNA.					
Homo sapiens	RefSeq	NM_017785.2	ILMN_29954	CCDC99	NM_017785.3	NM_017785.3		54908	141802559	NM_017785.3	CCDC99	NP_060255.2	ILMN_1695357	0000520528	S	2115	GCTTGACTCTAACCTGGAGAGCTTCTTAAGTGATGCCCCTTCATGGAGCT				5q35.1b	Homo sapiens coiled-coil domain containing 99 (CCDC99), mRNA.				FLJ20364	
Homo sapiens	RefSeq	XM_001714657.1	ILMN_347065	LOC100132963	XM_001714657.1	XM_001714657.1		100132963	169216481	XM_001714657.1	LOC100132963	XP_001714709.1	ILMN_3233263	0003890128	I	26	AGATCAATACAATCTTGGAGTCAAAAGGCAAATCATTTGGACAATCTGCA				Xq28g	PREDICTED: Homo sapiens similar to hCG1808463 (LOC100132963), mRNA.					
Homo sapiens	RefSeq	XM_940500.1	ILMN_18807	ADAM32	NM_145004.5	NM_145004.5		203102	148664237	NM_145004.5	ADAM32	NP_659441.3	ILMN_1806841	0005050328	A	2440	CCAGCCAATCCAGCTCAGAAGGCAGCACTCAGACATATGCCAGCCAAACC	8	+	39094835-39094841:39103602-39103644	8p11.23b-p11.23a	Homo sapiens ADAM metallopeptidase domain 32 (ADAM32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ29004; FLJ26299	
Homo sapiens	RefSeq	NM_145004.4	ILMN_18807	ADAM32	NM_145004.5	NM_145004.5		203102	148664237	NM_145004.5	ADAM32	NP_659441.3	ILMN_1798045	0005860541	I	2167	AGTGCCATTGTTCGCCAGGCTATAAGCCTCCAAACTGCCAAATACGTTCC	8	+	39089639-39089654:39091418-39091451	8p11.23b-p11.23a	Homo sapiens ADAM metallopeptidase domain 32 (ADAM32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ29004; FLJ26299	FLJ29004; FLJ26299
Homo sapiens	RefSeq	NM_015556.1	ILMN_3802	SIPA1L1	NM_015556.1	NM_015556.1		26037	7662125	NM_015556.1	SIPA1L1	NP_056371.1	ILMN_2128162	0006940369	S	5744	ACACCATAGACATGAGCTAGGGAAGGCTGAGGAGGACAGGAGAAGGGCCC	14	+	71275612-71275631:71275632-71275661	14q24.2a-q24.2b	Homo sapiens signal-induced proliferation-associated 1 like 1 (SIPA1L1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	E6TP1; KIAA0440; DKFZp686G1344	E6TP1; KIAA0440; DKFZp686G1344
Homo sapiens	RefSeq	XM_001722593.1	ILMN_352442	LOC100132802	XM_001722593.1	XM_001722593.1		100132802	169211116	XM_001722593.1	LOC100132802	XP_001722645.1	ILMN_3249093	0000430131	S	61	TCATTTGATAAAAGCTGCCGCTGTGGAGTCTGCCTACCCAGCACCTGCCC	17	+	119723-119772		PREDICTED: Homo sapiens hypothetical protein LOC100132802 (LOC100132802), mRNA.					
Homo sapiens	RefSeq	XM_935587.1	ILMN_178363	PEG10	NM_015068.3	NM_015068.3		23089	94421474	NM_015068.3	PEG10	NP_055883.2	ILMN_1670019	0002940504	S	1524	TGCAAGTGATGCTCCAGATTCATCTTCCGGGCAGACACACCCTGTTCGTC	7	+	94293913-94293962	7q21.3b	Homo sapiens paternally expressed 10 (PEG10), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites [goid 32196] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Mart2; MEF3L; Mar2; HB-1; KIAA1051; Edr; RGAG3	
Homo sapiens	RefSeq	XM_001732822.1	ILMN_339667	LOC100129697	XM_001732822.1	XM_001732822.1		100129697	169209562	XM_001732822.1	LOC100129697	XP_001732874.1	ILMN_3182069	0003800592	A	1126	CACAGAGGGTCAGAGTGTTGGCACCTGTCTTCCGGGTCTGTTCACCCGTC				16q24.3a	PREDICTED: Homo sapiens hypothetical protein LOC100129697 (LOC100129697), mRNA.					
Homo sapiens	RefSeq	NM_003663.3	ILMN_7303	CGGBP1	NM_003663.3	NM_003663.3		8545	56550052	NM_003663.3	CGGBP1	NP_003654.3	ILMN_2387090	0001300398	A	777	CACCCAGCAGTCCGTGCTTTCCTATCTCGCCATGTGAAGAATGGAGGCTC	3	-	88187400-88187449	3p11.2a	Homo sapiens CGG triplet repeat binding protein 1 (CGGBP1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8626781] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 8626781] [evidence TAS]	CGGBP; p20-CGGBP	CGGBP; p20-CGGBP
Homo sapiens	RefSeq	NM_005422.1	ILMN_14905	TECTA	NM_005422.2	NM_005422.2		7007	134268639	NM_005422.2	TECTA	NP_005413.2	ILMN_1744784	0006650411	S	6251	GGCTGGACTGGTGTGAGGACAATGGAGGGTGTGAGCAGATTTGCACGAGC	11	+	120565683-120565732	11q23.3h	Homo sapiens tectorin alpha (TECTA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9590290] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]	DFNA8; DFNB21; DFNA12	DFNA8; DFNB21; DFNA12
Homo sapiens	Unigene	Hs.336643	ILMN_86697	HS.336643	Hs.336643		Hs.336643		27791011	CB052724			ILMN_1905310	0001740709	S	421	CCAGGGTGGTATAAGAAGCAGAAGCAGAGGAGAAAGCAGAGGCCAGATCC	19	-	62473089-62473138		NISC_gl09g03.y1 NCI_CGAP_Lei2 Homo sapiens cDNA clone IMAGE:3290668 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001005411.2	ILMN_28379	FCGR2C	NM_001005411.2	NM_001005411.2		9103	126090527	NM_001005411.2	FCGR2C	NP_001005411.2	ILMN_2331121	0002710091	A	825	CTACTGCAGGAAAAAGCGGATTTCAGCCACCTGGACGTCAAATGATTGCC	1	+	159828631-159828656:159836044-159836067	1q23.3b	Homo sapiens Fc fragment of IgG, low affinity IIc, receptor for (CD32) (FCGR2C), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 2531080] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2531080] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 2531080] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17785206] [evidence IPI]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	FCGR2B; CD32; FcgammaRIIC; hFcRII-C; CD32C	CD32C; FCGR2B; CD32; FcgammaRIIC; hFcRII-C
Homo sapiens	RefSeq	NM_198057.2	ILMN_23548	TSC22D3	NM_198057.2	NM_198057.2		1831	62865623	NM_198057.2	TSC22D3	NP_932174.1	ILMN_1781356	0007570561	I	362	TGAGAAGATGGCCCAGTCCAAGCTCGATTGCCGCTCACCTGTCGGCCTCG	X	-	107018606-107018649:107018650-107018655	Xq22.3b	Homo sapiens TSC22 domain family, member 3 (TSC22D3), transcript variant 1, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8982256] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8982256] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	hDIP; DIP; DKFZp313A1123; DSIPI; TSC-22R; GILZ	hDIP; DIP; DKFZp313A1123; DSIPI; TSC-22R; GILZ
Homo sapiens	RefSeq	NM_004089.3	ILMN_23548	TSC22D3	NM_198057.2	NM_198057.2		1831	62865623	NM_198057.2	TSC22D3	NP_932174.1	ILMN_1748124	0006350632	A	2043	GAAGGATGGTGTCCTACTGTGGATGAGGGATGAACAAGGGGATGGCTTTG	X	-	106956627-106956676	Xq22.3b	Homo sapiens TSC22 domain family, member 3 (TSC22D3), transcript variant 1, mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8982256] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell [goid 6970] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8982256] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	hDIP; DIP; DKFZp313A1123; DSIPI; TSC-22R; GILZ	hDIP; DIP; DKFZp313A1123; DSIPI; TSC-22R; GILZ
Homo sapiens	RefSeq	NM_144586.3	ILMN_4518	LYPD1	NM_144586.5	NM_144586.5		116372	126273571	NM_144586.5	LYPD1	NP_653187.3	ILMN_1668863	0002760709	S	2507	GCCACAAGCAAGAGAGAATTTAACACTGTTTCAAACCCGGGGGAGTTGGC	2	-	133402463-133402512	2q21.2b	Homo sapiens LY6/PLAUR domain containing 1 (LYPD1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			MGC29643; LYPDC1; PHTS; FLJ41033	MGC29643; FLJ41033; LYPDC1
Homo sapiens	RefSeq	Hs.575051	ILMN_179073	LOC729675	XM_001130993.1	XM_001130993.1		729675	113415800	XM_001130993.1	LOC729675	XP_001130993.1	ILMN_1844779	0001190730	S	470	CGGCTAGTCTTCGTCGGTTCCGCCTGCGTCAGGTTACTCGTGAAAACTCG	4	-	144325160-144325209	4q31.21c	PREDICTED: Homo sapiens similar to hCG1820578 (LOC729675), mRNA.					
Homo sapiens	RefSeq	XM_374787.3	ILMN_31563	C10ORF21	XM_374787.3	XM_374787.3		414194	89030921	XM_374787.3	C10orf21	XP_374787.3	ILMN_1687478	0001820242	A	2657	GGCTTAAATGGAGGATCACTTGAGGCCTAGCCTTGGAGGCTGCAGTGCAC	10	-	42224226-42224275	10q11.21a	PREDICTED: Homo sapiens chromosome 10 open reading frame 21 (C10orf21), mRNA.					
Homo sapiens	RefSeq	NM_173164.1	ILMN_25775	NFATC3	NM_173164.1	NM_173164.1		4775	27886558	NM_173164.1	NFATC3	NP_775187.1	ILMN_1677633	0000050747	I	3336	GTTCTTGAAGTAGTGAAGATTCAGGGACTTTATTCTCCCAAGTGTCATGA	16	+	66783199-66783211:66783212-66783248	16q22.1c	Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 (NFATC3), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 7749981] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 7739550] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NFATX; NFAT4	NFAT4; NFATX
Homo sapiens	RefSeq	XM_943715.1	ILMN_164396	LOC730024	XR_015755.1	XR_015755.1		730024	113413247	XR_015755.1	LOC730024		ILMN_1674747	0000770136	I	626	GCTGAGTCAATGGCTTTGAGAATGTCACTGCATATGGGAGATTGAGGCCC	2	+	131176479-131176528	2q21.1b	PREDICTED: Homo sapiens similar to male sterility domain containing 1 (LOC730024), mRNA.					
Homo sapiens	RefSeq	XM_928770.1	ILMN_164396	LOC730024	XR_015755.1	XR_015755.1		730024	113413247	XR_015755.1	LOC730024		ILMN_1659631	0000380097	A	2837	GCCAAGGAGGCACCAGGGCATAAGTCTACTCACTTATATCTGTTTGTCTG	2	+	131178690-131178739	2q21.1b	PREDICTED: Homo sapiens similar to male sterility domain containing 1 (LOC730024), mRNA.					
Homo sapiens	RefSeq	NM_022901.1	ILMN_21980	LRRC19	NM_022901.1	NM_022901.1		64922	12597640	NM_022901.1	LRRC19	NP_075052.1	ILMN_1740949	0000610739	S	2902	CGTGGAATGGGACAGTGGCTAGAGGTATGGATGGAGCAAGGTCAAATATG	9	-	26983770-26983819	9p21.2a	Homo sapiens leucine rich repeat containing 19 (LRRC19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ21302	FLJ21302
Homo sapiens	RefSeq	NM_017765.1	ILMN_26134	PQLC2	NM_017765.1	NM_017765.1		54896	8923300	NM_017765.1	PQLC2	NP_060235.1	ILMN_1733555	0007550176	S	2092	CCTCCTGGGAAACACCAGCTTTTGGGGTGATAGCACTTTCAGGCAGGAGC	1	+	19530962-19531011	1p36.13b	Homo sapiens PQ loop repeat containing 2 (PQLC2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP4-657E11.5; FLJ26665; FLJ20320; FLJ26661; FLJ23906	RP4-657E11.5; FLJ26665; FLJ20320; FLJ26661; FLJ23906
Homo sapiens	RefSeq	XM_930804.1	ILMN_178867	LOC727866	XM_001126035.1	XM_001126035.1		727866	113429903	XM_001126035.1	LOC727866	XP_001126035.1	ILMN_1670304	0007550767	A	557	AACCCAGCGACCTGACTGCCTTGGTCTGGGTTCTGCCCGCACACATTCCT	X	+	52945269-52945292:52952861-52952886	Xp11.22b	PREDICTED: Homo sapiens similar to transmembrane protein 29, transcript variant 2 (LOC727866), mRNA.					
Homo sapiens	RefSeq	XM_937986.1	ILMN_31583	LOC648905	XM_937986.1	XM_937986.1		648905	89060766	XM_937986.1	LOC648905	XP_943079.1	ILMN_1655275	0004070255	S	11	GTTTGCCCTGGGATGGTGAAGAACAGCTTCCTGCCTTCAGATTTCTCACC					PREDICTED: Homo sapiens hypothetical protein LOC648905 (LOC648905), mRNA.					
Homo sapiens	RefSeq	XM_290660.7	ILMN_44439	LOC654259	XM_290660.7	XM_290660.7		654259	89064382	XM_290660.7	LOC654259	XP_290660.3	ILMN_1793916	0006060301	S	21	ACTAGGTATTTCTAGTAATTTTGCATATGTCTCACATCAGGAATTTTCGA					PREDICTED: Homo sapiens similar to Programmed cell death 6-interacting protein (ALG-2 interacting protein X) (ALG-2 interacting protein 1) (E2F1-inducible protein) (Eig2) (LOC654259), mRNA.					
Homo sapiens	RefSeq	NM_032257.3	ILMN_456	ZMYND12	NM_032257.3	NM_032257.3		84217	34222153	NM_032257.3	ZMYND12	NP_115633.2	ILMN_1655545	0000840634	S	1430	CTGCTTTGAGGTACTGTAGACTGCTGAAGTTTCCACCCTCTTCCCCTGGG	1	-	42668871-42668920	1p34.2b	Homo sapiens zinc finger, MYND-type containing 12 (ZMYND12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434N2435	DKFZp434N2435
Homo sapiens	Unigene	Hs.334831	ILMN_86595	HS.334831	Hs.334831		Hs.334831		34366677	BX647520			ILMN_1911605	0003800424	S	2354	AAGTCTGATTGGAGTTCTTTTCATGCTCACTTTCCCCTTATTGCTGAAAG	12	+	68259740-68259789		Homo sapiens mRNA; cDNA DKFZp686I05206 (from clone DKFZp686I05206)					
Homo sapiens	RefSeq	NM_014057.3	ILMN_5435	OGN	NM_014057.3	NM_014057.3		4969	126273526	NM_014057.3	OGN	NP_054776.1	ILMN_2387105	0002940280	A	1007	AATGACACCAGTTACATCCGGGACCGCATTGAAGAGATACGCCTGGAGGG	9	-	95147977-95148026	9q22.31a	Homo sapiens osteoglycin (OGN), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 10373482] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10373482] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	OG; SLRR3A; DKFZP586P2421; OIF	OG; SLRR3A; DKFZP586P2421; OIF
Homo sapiens	RefSeq	NM_024416.2	ILMN_5435	OGN	NM_014057.3	NM_014057.3		4969	126273526	NM_014057.3	OGN	NP_054776.1	ILMN_1790098	0004480152	A	2211	GGTGCCAGAGTAAAGTTTCTAAAATAACATTCCTCTCACTTGTACCCCAC	9	-	95146773-95146822	9q22.31a	Homo sapiens osteoglycin (OGN), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 10373482] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 10373482] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	OG; SLRR3A; DKFZP586P2421; OIF	SLRR3A; DKFZP586P2421; OIF
Homo sapiens	RefSeq	NM_005813.3	ILMN_7533	PRKD3	NM_005813.3	NM_005813.3		23683	48255886	NM_005813.3	PRKD3	NP_005804.1	ILMN_1703196	0004810450	S	4287	GAGGGGATGTGTAGGAGTGGAGCATGAAACAGTTTATAAGGCTGGGGCTG	2	-	37479211-37479260	2p22.2b	Homo sapiens protein kinase D3 (PRKD3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10231560] [evidence TAS]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [pmid 10231560] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [pmid 10231560] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17196367] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PRKCN; EPK2; PKC-NU; nPKC-NU; PKD3	PRKCN; EPK2; PKC-NU; nPKC-NU; PKD3
Homo sapiens	RefSeq	XM_001718290.1	ILMN_334728	LOC100133928	XM_001718290.1	XM_001718290.1		100133928	169165488	XM_001718290.1	LOC100133928	XP_001718342.1	ILMN_3235482	0005560717	S	148	TTCCACATCCTCACGTGCCTTCTCAAGCACAGGACCAAGCCCGCTGACCT					PREDICTED: Homo sapiens similar to vomeronasal 1 receptor, A5 (LOC100133928), mRNA.					
Homo sapiens	RefSeq	NM_016821.1	ILMN_23735	OGG1	NM_016821.1	NM_016821.1		4968	8670533	NM_016821.1	OGG1	NP_058214.1	ILMN_2352609	0002760129	A	676	GGTGGCTCAGAAATTCCAAGGTGTGCGACTGCTGCGACAAGACCCCATCG	3	+	9767857-9767876:9768454-9768483	3p25.3c	Homo sapiens 8-oxoguanine DNA glycosylase (OGG1), nuclear gene encoding mitochondrial protein, transcript variant 2a, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10583946] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9223305] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 9190902] [evidence TAS]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The disruption of the bond between the sugar in the backbone and the A or G base, causing the base to be removed and leaving a depurinated sugar [goid 45007] [pmid 10583946] [evidence EXP]	Interacting selectively with damaged DNA [goid 3684] [pmid 9223305] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [pmid 9223305] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15518571] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [evidence IEA]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [pmid 10583946] [evidence EXP]; Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site [goid 8534] [pmid 9190902] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	HOGG1; MUTM; HMMH; OGH1	HOGG1; OGH1; MUTM; HMMH
Homo sapiens	RefSeq	NR_029663.1	ILMN_387811	MIR15B	NR_029663.1	NR_029663.1		406949	262205221	NR_029663.1	MIR15B		ILMN_3311010	0002650431	S	2	GAGGCCTTAAAGTACTGTAGCAGCACATCATGGTTTACATGCTACAGTCA				3q26.1a	Homo sapiens microRNA 15b (MIR15B), microRNA.					
Homo sapiens	RefSeq	XM_930401.1	ILMN_138769	LOC400927	XM_930401.1	XM_930401.1		400927	89058853	XM_930401.1	LOC400927	XP_935494.1	ILMN_1786423	0003180047	A	80	AAGACCCGACAGCGGGGCGCGCGCCGCAACTCCACAGACAAACGAATTTA	22	-	37106921-37106941:37123259-37123287	22q13.1b	PREDICTED: Homo sapiens similar to TPTE and PTEN homologous inositol lipid phosphatase isoform alpha; TPTE and PTEN homologous inositol lipid phosphatase, transcript variant 1 (LOC400927), mRNA.					
Homo sapiens	RefSeq	NM_006575.3	ILMN_10246	MAP4K5	NM_006575.3	NM_006575.3		11183	38570133	NM_006575.3	MAP4K5	NP_006566.2	ILMN_2408908	0002350451	A	2773	GGGTTGTCGTTTTGGAAAGTAGGCCAACAGAAAATCCTACTGCACACAGC	14	-	50886775-50886824	14q22.1b	Homo sapiens mitogen-activated protein kinase kinase kinase kinase 5 (MAP4K5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9038372] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9038372] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9038372] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 9038372] [evidence IDA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 9038372] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9038372] [evidence IDA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9788432] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9038372] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KHS1; KHS; MAPKKKK5; GCKR	KHS1; KHS; MAPKKKK5; GCKR
Homo sapiens	RefSeq	NM_006377.2	ILMN_1037	UNC13B	NM_006377.3	NM_006377.3		10497	110611225	NM_006377.3	UNC13B	NP_006368.3	ILMN_1669747	0005820121	S	6102	GGAAGGGGCCCTCCACACTTCCTGGGAGGTCAGAGACAAACTGTTTCAGA	9	+	35382402-35382451	9p13.3b	Homo sapiens unc-13 homolog B (C. elegans) (UNC13B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10233166] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9607201] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10233166] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 9607201] [evidence TAS]; The formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion [goid 16082] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9607201] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hmunc13; Unc13h2; MGC133279; MUNC13; MGC133280; UNC13	hmunc13; Unc13h2; MUNC13; UNC13
Homo sapiens	RefSeq	NM_005626.3	ILMN_27288	SFRS4	NM_005626.3	NM_005626.3		6429	34147660	NM_005626.3	SFRS4	NP_005617.2	ILMN_2175075	0007200037	S	1852	TGGCCTTTCCTACAGGGAGCTCAGTAACCTGGACGGCTCTAAGGCTGGAA	1	-	29347189-29347238	1p35.3a	Homo sapiens splicing factor, arginine/serine-rich 4 (SFRS4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8321209] [evidence TAS]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 8321209] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 8321209] [evidence TAS]	SRP75	SRP75
Homo sapiens	Unigene	Hs.150734	ILMN_78982	HS.150734	Hs.150734		Hs.150734		82077505	DA820827			ILMN_1909610	0003360356	S	164	CCTGGGGTAGCTTGTCCTTTTGCAGTTAACCGAGATGCCTGGGGAGAAGA	18	+	20494386-20494435		DA820827 PERIC2 Homo sapiens cDNA clone PERIC2000642 5, mRNA sequence					
Homo sapiens	RefSeq	NM_018004.1	ILMN_30168	TMEM45A	NM_018004.1	NM_018004.1		55076	8922242	NM_018004.1	TMEM45A	NP_060474.1	ILMN_2148913	0006280520	S	1220	TTGGAGAACAGCTGGCTAAGGATGACTCTAAGTGTACTGTTTGCATTTCC	3	+	100295941-100295990	3q12.2a	Homo sapiens transmembrane protein 45A (TMEM45A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DERP7; FLJ10134	DERP7; FLJ10134
Homo sapiens	RefSeq	NM_018004.1	ILMN_30168	TMEM45A	NM_018004.1	NM_018004.1		55076	8922242	NM_018004.1	TMEM45A	NP_060474.1	ILMN_1770922	0004610341	S	883	GGGGAGCTGGTTCTTTCAGATTGGATTTGTCCTGTATCCCCCCAGTGGAG	3	+	100277415-100277433:100287666-100287696	3q12.2a	Homo sapiens transmembrane protein 45A (TMEM45A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DERP7; FLJ10134	DERP7; FLJ10134
Homo sapiens	RefSeq	XM_927420.1	ILMN_11362	C8ORF30A	NM_016458.2	NM_016458.2		51236	13124772	NM_016458.2	C8orf30A	NP_057542.2	ILMN_1652888	0003800441	I	666	TGGTCCAGCGGCTGCTGCCCCTTACCCAGTACCCCGACTCCTCTGTACGC	8	+	145193415-145193464	8q24.3g	Homo sapiens chromosome 8 open reading frame 30A (C8orf30A), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ40907	
Homo sapiens	RefSeq	NM_016458.2	ILMN_11362	C8ORF30A	NM_016458.2	NM_016458.2		51236	13124772	NM_016458.2	C8orf30A	NP_057542.2	ILMN_1745992	0002650228	I	1	GGGCCACACAGCGGACCCCTAAGCGGACCGCTGGCACCGGTCGGGTGGCA	8	+	145192672-145192721	8q24.3g	Homo sapiens chromosome 8 open reading frame 30A (C8orf30A), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ40907	FLJ40907
Homo sapiens	RefSeq	XM_944907.1	ILMN_137599	PTP4A2	XM_944907.1	XM_944907.1		8073	88947644	XM_944907.1	PTP4A2	XP_950000.1	ILMN_1795697	0004250747	I	1054	GATAATTAAAAAACTGGTGGGGCATGTTGGTGCACACCTGTGGTCCCAGC				1p35.2a	PREDICTED: Homo sapiens protein tyrosine phosphatase type IVA, member 2, transcript variant 5 (PTP4A2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: prenylated-protein tyrosine phosphate + H2O = prenylated-protein tyrosine + phosphate [goid 4727] [pmid 9514946] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	XM_930256.1	ILMN_32829	LOC651731	XM_940948.2	XM_940948.2		651731	113412520	XM_940948.2	LOC651731	XP_946041.1	ILMN_1661800	0006940551	S	235	CATCTGCGGTTGGCAGCCTTTGAGATCTATGGGAGTCTCTTGACCAAGGT					PREDICTED: Homo sapiens hypothetical LOC651731 (LOC651731), mRNA.					
Homo sapiens	RefSeq	NM_018478.2	ILMN_166996	DBNDD2	NM_001048223.1	NM_001048223.1		55861	115299749	NM_001048223.1	DBNDD2	NP_001041688.1	ILMN_1730612	0006420168	I	1013	AGGTGGTACTCAAGCCATGCTGCCTCCTTACATCCTTTTTGGAACAGAGC	20	+	43472577-43472626	20q13.12b	Homo sapiens dysbindin (dystrobrevin binding protein 1) domain containing 2 (DBNDD2), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HSMNP1; CK1BP; C20orf35	HSMNP1; C20orf169
Homo sapiens	RefSeq	XM_497579.2	ILMN_46082	LOC441812	XM_497579.2	XM_497579.2		441812	89045072	XM_497579.2	LOC441812	XP_497579.2	ILMN_1669647	0003130553	S	354	ACGGACCCTGGAGCGTTGGTTGTGCAACATGTGGTCAGGCATTGTTGTGG	18	-	15077662-15077699:15187544-15187555		PREDICTED: Homo sapiens similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (LOC441812), mRNA.					
Homo sapiens	Unigene	Hs.542632	ILMN_106422	HS.542632	Hs.542632		Hs.542632		416051	U03241			ILMN_1819158	0004880243	S	65	CCAGGCTCCAAATTGAGGGCTTTGGGGTGATGGGGATCTTCTTCTGCTTG	21	+	19211466-19211515		Human clone pLSB8 chromosome 21 STS					
Homo sapiens	RefSeq	NR_003709.1	ILMN_338625	SNORA11B	NR_003709.1	NR_003709.1		100124539	156564418	NR_003709.1	SNORA11B		ILMN_3239704	0003130278	S	65	CTGGGGTCATTGTGACAAGGGACACAGAGCTTGTGACCTCCCTACAAACA	14	+	90662587-90662636	14q32.12a	Homo sapiens small nucleolar RNA, H/ACA box 11B (retrotransposed) (SNORA11B), small nucleolar RNA.					
Homo sapiens	RefSeq	NM_145804.1	ILMN_22109	ABTB2	NM_145804.1	NM_145804.1		25841	21956638	NM_145804.1	ABTB2	NP_665803.1	ILMN_1753370	0000940148	S	3752	AAGAGGCCTTTCTGCTGTGTCCCCTCACGGCCTTGCCCTCGAATTCTGCA	11	-	34173798-34173847	11p13c	Homo sapiens ankyrin repeat and BTB (POZ) domain containing 2 (ABTB2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZP586C1619	DKFZP586C1619
Homo sapiens	RefSeq	NR_003365.1	ILMN_164806	SUGT1L1	NR_003365.1	NR_003365.1		283507	126365819	NR_003365.1	SUGT1L1		ILMN_3248915	0000770364	S	3946	AGGGGGAGGCTAATGAATGTACAAATGCTAGCAACAACTGTCTCCCGTCC	13	-	41371316-41371365	13q14.11a	Homo sapiens SGT1, suppressor of G2 allele of SKP1 like 1 (S. cerevisiae) (SUGT1L1), non-coding RNA.					
Homo sapiens	RefSeq	NR_030613.1	ILMN_388125	MIR744	NR_030613.1	NR_030613.1		100126313	262206132	NR_030613.1	MIR744		ILMN_3310970	0000620368	S	39	TGAAGGTTTCCTGGAAACCACGCACATGCTGTTGCCACTAACCTCAACCT				17p12d	Homo sapiens microRNA 744 (MIR744), microRNA.					
Homo sapiens	RefSeq	NM_030925.1	ILMN_165065	CAB39L	NM_001079670.1	NM_001079670.1		81617	118766334	NM_001079670.1	CAB39L	NP_001073138.1	ILMN_1730529	0005890010	I	2013	AGCAGGAAGAGGATGGATCAACAAGGGTCACGGGGAATAGGGGACCCACG	13	-	49884246-49884295	13q14.2c-q14.3a	Homo sapiens calcium binding protein 39-like (CAB39L), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	bA103J18.3; RP11-103J18.3; MO2L; FLJ12577	bA103J18.3; RP11-103J18.3; MO2L; FLJ12577
Homo sapiens	RefSeq	NM_001031724.1	ILMN_165065	CAB39L	NM_001079670.1	NM_001079670.1		81617	118766334	NM_001079670.1	CAB39L	NP_001073138.1	ILMN_1783598	0000780500	A	1354	CCTTGAAGAGCTCCCCGGCCCCTGTCACAGTCAGTCGTCTCATTTGTCCA	13	-	49884905-49884949:49884950-49884954	13q14.2c-q14.3a	Homo sapiens calcium binding protein 39-like (CAB39L), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	bA103J18.3; RP11-103J18.3; MO2L; FLJ12577	bA103J18.3; RP11-103J18.3; MO2L; FLJ12577
Homo sapiens	RefSeq	NM_152632.1	ILMN_46417	CXORF22	NM_152632.2	NM_152632.2		170063	90963000	NM_152632.2	CXorf22	NP_689845.2	ILMN_1762534	0003800491	S	3192	CTGGTACAGTCCAGAGGGCCTTAAATTCATGACTCAATCACCAAGCATGA	X	+	35917776-35917825	Xp21.1b	Homo sapiens chromosome X open reading frame 22 (CXorf22), mRNA.				MGC34831	MGC34831
Homo sapiens	Unigene	Hs.565987	ILMN_118381	HS.565987	Hs.565987		Hs.565987		19731427	BQ006527			ILMN_1909296	0006770471	S	523	GGAGAGCAGCGCACATGCGGGAGGGTGGAGATCATGAACATGGGTGTGAA	3	-	13662689-13662738		UI-H-EI1-aza-j-19-0-UI.s1 NCI_CGAP_EI1 Homo sapiens cDNA clone IMAGE:5846130 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001013633.1	ILMN_19371	LOC387720	NM_001013633.1	NM_001013633.1		387720	61966714	NM_001013633.1	LOC387720	NP_001013655.1	ILMN_1662123	0004050309	S	1792	ACACCCACTTTCCTCCCATAACACCCTTCCGGAGCTTGCCAGAGGGTCTG	10	-	129423409-129423458	10q26.2c	Homo sapiens hypothetical gene supported by AK127642 (LOC387720), mRNA.					
Homo sapiens	RefSeq	NM_001011668.1	ILMN_18489	CHCHD7	NM_001011671.1	NM_001011671.1		79145	58761519	NM_001011671.1	CHCHD7	NP_001011671.1	ILMN_1744138	0005220504	A	1128	CTATTTGCAGGATGAGTTGGGCAGGGAAAAGGGTCAGGGTTCATCAGGTG	8	+	57130766-57130815	8q12.1b	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 7 (CHCHD7), transcript variant 6, mRNA.				FLJ40966; MGC2217	FLJ40966; MGC2217
Homo sapiens	Unigene	Hs.545519	ILMN_108713	HS.545519	Hs.545519		Hs.545519		24784161	CA421506			ILMN_1837152	0005700653	S	487	CACATCTAATCATGGATGACAGAATCTCCAAAGACTGGATATATTGCAAC	8	+	16597261-16597310		UI-H-FG0-bcu-e-06-0-UI.s1 NCI_CGAP_EN1_2 Homo sapiens cDNA clone UI-H-FG0-bcu-e-06-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_145313.1	ILMN_14106	RASGEF1A	NM_145313.1	NM_145313.1		221002	21687176	NM_145313.1	RASGEF1A	NP_660356.1	ILMN_1761990	0005310253	S	2773	TGGAAGAGCCTGAAGACATTGGGAAAGGCTGGGCCTGGGGAGGAGGCAGC	10	-	43010402-43010451	10q11.21a	Homo sapiens RasGEF domain family, member 1A (RASGEF1A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	FLJ37817; CG4853	FLJ37817; CG4853
Homo sapiens	Unigene	Hs.555252	ILMN_112234	HS.555252	Hs.555252		Hs.555252		80893033	DA371742			ILMN_1818149	0000520451	S	179	CCCCAGATGGTTCCAAATATTCCTTACCTCGTTTGGTTCCCAAGTCACAG	9	-	2785267-2785316		DA371742 BRTHA2 Homo sapiens cDNA clone BRTHA2001741 5, mRNA sequence					
Homo sapiens	RefSeq	NM_152323.1	ILMN_28909	SPIC	NM_152323.1	NM_152323.1		121599	22748706	NM_152323.1	SPIC	NP_689536.1	ILMN_1755124	0003360722	S	582	CGGAGGAAGCTGACTTACCAGTTCAGTGAGGCCATTCTCCAAAGACTCTC	12	+	100404489-100404538	12q23.2a	Homo sapiens Spi-C transcription factor (Spi-1/PU.1 related) (SPIC), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	SPI-C; MGC40611	SPI-C; MGC40611
Homo sapiens	RefSeq	NM_152323.1	ILMN_28909	SPIC	NM_152323.1	NM_152323.1		121599	22748706	NM_152323.1	SPIC	NP_689536.1	ILMN_2191940	0006980020	S	789	TCATGGTTTACTGGCATCGGAAATCTCTACAAGTTTTAATGATTTCTCCC	12	+	100404696-100404745	12q23.2a	Homo sapiens Spi-C transcription factor (Spi-1/PU.1 related) (SPIC), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	SPI-C; MGC40611	SPI-C; MGC40611
Homo sapiens	RefSeq	XM_001716962.1	ILMN_347013	LOC100131811	XM_001716962.1	XM_001716962.1		100131811	169166932	XM_001716962.1	LOC100131811	XP_001717014.1	ILMN_3233254	0005670204	I	1180	GTCTTCATGTTCCTCCTCATGCCGACAAGGACTGCTCTTCCAGTAGCTGT				4q35.1c	PREDICTED: Homo sapiens hypothetical protein LOC100131811 (LOC100131811), mRNA.					
Homo sapiens	RefSeq	XR_017463.2	ILMN_175529	LOC388248	XR_017463.2	XR_017463.2		388248	169209913	XR_017463.2	LOC388248		ILMN_3235383	0002140465	S	676	CAGCAGAGAGGAGCTCTTGGTCTGATGGGAGATGGAGCTCCTGCCCTCAG	16	+	31898735-31898784	16p11.2b	PREDICTED: Homo sapiens misc_RNA (LOC388248), miscRNA.					
Homo sapiens	RefSeq	NM_000817.2	ILMN_4770	GAD1	NM_000817.2	NM_000817.2		2571	58331245	NM_000817.2	GAD1	NP_000808.2	ILMN_2292646	0003840192	I	3196	CGCTCTCTGTCTGGCTGTACGTCTGGTGTTCTCAATGCTTTTCTAGCAAC	2	+	171425627-171425676	2q31.1c	Homo sapiens glutamate decarboxylase 1 (brain, 67kDa) (GAD1), transcript variant GAD67, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 10671565] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [pmid 10671565] [evidence NAS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways resulting in the formation of succinate from glutamate. Also known as GABA (gamma-aminobutyrate) shunt since it channels glutamate into the TCA cycle bypassing two steps of that cycle. There are three enzymes involved in the GABA shunt: glutamate decarboxylase (GAD), GABA aminotransferase (GABA-TA), and succinate semialdehyde dehydrogenase (SSADH). These three enzymes acting in concert to convert glutamate into succinate. The GABA shunt is predominantly associated with neurotransmission in the mammalian brain. It is also present in nonneuronal cells, in plants, in unicellular eukaryotes, and in prokaryotes [goid 6540] [pmid 1549570] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8954991] [evidence TAS];  [goid 18352] [pmid 10671565] [evidence TAS]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42136] [evidence IEA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]	Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2 [goid 4351] [pmid 10671565] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10671565] [evidence IPI]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	SCP; FLJ45882; GAD	SCP; FLJ45882; GAD
Homo sapiens	RefSeq	NM_003258.1	ILMN_30154	TK1	NM_003258.2	NM_003258.2		7083	142380763	NM_003258.2	TK1	NP_003249.1	ILMN_1806037	0004730196	S	1071	TGACATCAGCCTGCTTCTTCCCCTCTGCGGCTTTCACTGCTGAGTTTCTG				17q25.3b	Homo sapiens thymidine kinase 1, soluble (TK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2026611] [evidence EXP]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 3335503] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + thymidine = ADP + thymidine 5'-phosphate [goid 4797] [pmid 3335503] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate [goid 19206] [pmid 2026611] [evidence EXP]	TK2	TK2
Homo sapiens	RefSeq	NM_000755.2	ILMN_4109	CRAT	NM_000755.2	NM_000755.2		1384	21618330	NM_000755.2	CRAT	NP_000746.2	ILMN_1737992	0003120437	A	2502	AGCTCTTTGTCTCACCAGCTCAGCCCCGGCCACTCCCTGCCAACTCCATG	9	-	130897121-130897170	9q34.11c	Homo sapiens carnitine acetyltransferase (CRAT), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 7829107] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 7829107] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA];  [goid 15980] [pmid 7829107] [evidence TAS]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + carnitine = CoA + O-acetylcarnitine [goid 4092] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CAT1	CAT1
Homo sapiens	RefSeq	NM_014588.4	ILMN_177346	VSX1	NM_014588.4	NM_014588.4		30813	40806214	NM_014588.4	VSX1	NP_055403.2	ILMN_2284400	0004880377	I	1765	TTGTTGGATAGCTGGAAACAGTGTTTTTAGGTCAGACCAGGCTTTTGGTC	20	-	25056215-25056264	20p11.21a	Homo sapiens visual system homeobox 1 (VSX1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10673340] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10673340] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	RINX; PPD; KTCN; PPCD	RINX; PPD; KTCN; PPCD
Homo sapiens	RefSeq	NR_031649.1	ILMN_388572	MIR1247	NR_031649.1	NR_031649.1		100302145	269847264	NR_031649.1	MIR1247		ILMN_3309448	0001230053	S	66	CTCTCTACCCCGGGAACGTCGAGACTGGAGCGCCCGAACTGAGCCACCTT					Homo sapiens microRNA 1247 (MIR1247), microRNA.					
Homo sapiens	RefSeq	XM_927182.1	ILMN_41329	LOC643922	XM_927182.1	XM_927182.1		643922	89034021	XM_927182.1	LOC643922	XP_932275.1	ILMN_1676793	0000160564	S	3	GGGCGCCTCGCTGGATCAGGAGCGCAGGGGACACCCTGCCAGATCCGGAG	11	-	59892141-59892190		PREDICTED: Homo sapiens hypothetical protein LOC643922 (LOC643922), mRNA.					
Homo sapiens	RefSeq	NM_001494.2	ILMN_15402	GDI2	NM_001494.2	NM_001494.2		2665	6598322	NM_001494.2	GDI2	NP_001485.2	ILMN_1754178	0006180538	S	2015	CTAACCAAACCCCAGACATAGGGAGTCATTTGGAGAAAGCCTGTATGTGG	10	-	5847400-5847449	10p15.1b	Homo sapiens GDP dissociation inhibitor 2 (GDI2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]	Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [evidence IEA]; Prevents the dissociation of GDP from the small GTPase Rab, thereby preventing GTP from binding [goid 5093] [pmid 7543319] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	FLJ37352; FLJ16452; RABGDIB	FLJ37352; FLJ16452; RABGDIB
Homo sapiens	RefSeq	NM_014443.2	ILMN_164725	IL17B	NM_014443.2	NM_014443.2		27190	27477077	NM_014443.2	IL17B	NP_055258.1	ILMN_1766707	0001190102	S	557	GGAGACCATCGCTGTGGGCTGCACCTGCATCTTCTGAATCACCTGGCCCA	5	-	148753918-148753931:148753932-148753967	5q33.1b	Homo sapiens interleukin 17B (IL17B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10639155] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10639155] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10639155] [evidence TAS]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 10639155] [evidence TAS]	MGC138900; IL-20; ZCYTO7; MGC138901; IL-17B	MGC138900; IL-20; ZCYTO7; MGC138901; IL-17B
Homo sapiens	Unigene	Hs.567033	ILMN_119248	HS.567033	Hs.567033		Hs.567033		23661647	BU734093			ILMN_1880103	0006770037	S	59	ATCAATGAATTAGAACCCAAGCTCCAAGCAATCCTCCTAGAATTTAGGgg	9	-	73886433-73886482		UI-E-CK1-agb-m-11-0-UI.s1 UI-E-CK1 Homo sapiens cDNA clone UI-E-CK1-agb-m-11-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000963.1	ILMN_176524	PTGS2	NM_000963.1	NM_000963.1		5743	4506264	NM_000963.1	PTGS2	NP_000954.1	ILMN_2054297	0001820632	S	4348	CAAAACCTGGGAATTTGGGTTGTGTATGCGAATGTTTCAGTGCCTCAGAC	1	-	184907659-184907708	1q31.1a	Homo sapiens prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) (PTGS2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14511332] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 4514999] [evidence EXP]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9630216] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence ISS];  [goid 19371] [pmid 14511332] [evidence NAS]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IEA]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [pmid 14511332] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [pmid 14511332] [evidence NAS]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [pmid 4514999] [evidence EXP]; Catalysis of the reaction: arachidonate + donor-H2 + 2 O2 = prostaglandin H2 + acceptor + H2O [goid 4666] [pmid 14511332] [evidence NAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PHS-2; COX-2; hCox-2; PGHS-2; PGG/HS; COX2	PHS-2; COX-2; hCox-2; PGHS-2; PGG/HS; COX2
Homo sapiens	RefSeq	NM_016506.3	ILMN_28460	KBTBD4	NM_016506.4	NM_016506.4		55709	142370072	NM_016506.4	KBTBD4	NP_057590.2	ILMN_1668000	0002060544	I	68	CTAGCTCCTTGTGGCAGAGCCTAGAGAGAAGGCGAGGACGCTGAAGAACC	11	-	47556961-47557010	11p11.2b	Homo sapiens kelch repeat and BTB (POZ) domain containing 4 (KBTBD4), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ10450; BKLHD4; HSPC252	FLJ10450; BKLHD4; HSPC252
Homo sapiens	RefSeq	NM_025081.2	ILMN_181017	NYNRIN	NM_025081.2	NM_025081.2		57523	126723546	NM_025081.2	NYNRIN	NP_079357.2	ILMN_3236858	0006590735	S	7640	GAAGTGGAAAGTGTGGGATTTTTGGCAGGTGCTCTCTTTCCTCCGCCCCC	14	+	23958117-23958166	14q12a	Homo sapiens NYN domain and retroviral integrase containing (NYNRIN), mRNA.				FLJ11811	FLJ11811
Homo sapiens	RefSeq	XM_944901.1	ILMN_44190	LOC651745	XM_944901.1	XM_944901.1		651745	88971195	XM_944901.1	LOC651745	XP_949994.1	ILMN_1670800	0005270685	S	2	TGTCTGGAAGGCAATCTGACCCTGGAGGTGGTAGCAAGATTCCACAGGAT					PREDICTED: Homo sapiens hypothetical protein LOC651745 (LOC651745), mRNA.					
Homo sapiens	RefSeq	NM_001001323.1	ILMN_15979	ATP2B1	NM_001001323.1	NM_001001323.1		490	48255946	NM_001001323.1	ATP2B1	NP_001001323.1	ILMN_1750599	0006180059	I	3554	CAGAGTGGAAGTTCCATTCAGGGGGCTCTAAGGCGGCAACCCTCCATCGC	12	-	89992449-89992498	12q21.33b	Homo sapiens ATPase, Ca++ transporting, plasma membrane 1 (ATP2B1), transcript variant 1, mRNA.				PMCA1; PMCA1kb	PMCA1; PMCA1kb
Homo sapiens	RefSeq	XM_934378.1	ILMN_34196	LOC647108	XM_934378.1	XM_934378.1		647108	89040270	XM_934378.1	LOC647108	XP_939471.1	ILMN_1774206	0001820273	S	241	CACCTGGGACCGGCCTCCCGTGGAGCCACCCCTTGCCCAGCCGCCCCCAA	16	+	31456416-31456465		PREDICTED: Homo sapiens hypothetical protein LOC647108 (LOC647108), mRNA.					
Homo sapiens	RefSeq	NM_001033002.1	ILMN_14005	RPAIN	NM_001033002.2	NM_001033002.2		84268	142363096	NM_001033002.2	RPAIN	NP_001028174.1	ILMN_1770339	0000730543	I	1002	CCTGAGAATCACAAGCGGTGTGGTGGTGTGTCAGTGTGGCCTGTCCATCC	17	+	5270286-5270335	17p13.2b	Homo sapiens RPA interacting protein (RPAIN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16135809] [evidence IDA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 16135809] [evidence IDA]	The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 16135809] [evidence IPI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 16135809] [evidence IPI]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 16135809] [evidence IPI]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [pmid 16135809] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 16135809] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 16135809] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC4189; RIP; HRIP	MGC4189; RIP; HRIP
Homo sapiens	RefSeq	NR_001279.1	ILMN_2576	LOC164380	NR_001279.1	NR_001279.1		164380	28476831	NR_001279.1	LOC164380		ILMN_2065383	0007330025	S	601	ATGTGCAGCAGGCACTCTGGTTCGCCATGAAGGAGTATAACAAGGCCAGC	20	+	23449645-23449694	20p11.21b	Homo sapiens cystatin pseudogene (LOC164380) on chromosome 20.				IMAGE:4837709; MGC26611; MGC41912; MGC26924	IMAGE:4837709; MGC26611; MGC41912; MGC26924
Homo sapiens	Unigene	Hs.569271	ILMN_121452	HS.569271	Hs.569271		Hs.569271		46272020	BX336469			ILMN_1894983	0004570402	S	547	GTCATAGACCAAGAGATGCCCATGAACAGCCATGAAAGTGCCAGTCAGGG	13	+	20174847-20174896		BX336469 Homo sapiens PLACENTA COT 25-NORMALIZED Homo sapiens cDNA clone CS0DI028YF10 3-PRIME, mRNA sequence					
Homo sapiens	RefSeq	NM_000657.2	ILMN_3287	BCL2	NM_000657.2	NM_000657.2		596	72198345	NM_000657.2	BCL2	NP_000648.2	ILMN_2363250	0004070735	A	998	CTGGTGGACAACATCGCCCTGTGGATGACTGAGTACCTGAACCGGCACCT	18	-	60985345-60985394	18q21.33b	Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nuclear gene encoding mitochondrial protein, transcript variant beta, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11530860] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9027314] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 9027314] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 11463392] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10198631] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 12624108] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 1453000] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 1502141] [evidence IDA]	The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [pmid 9027314] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11684014] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9027314] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10506221] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10620603] [evidence IDA]; An immune response mediated through a body fluid [goid 6959] [pmid 1908951] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 11530860] [evidence NAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 8949945] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 15231831] [evidence EXP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [pmid 15799693] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 16307838] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus [goid 10039] [pmid 11264898] [evidence IDA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a process that reduces the internal pH of a cell [goid 32848] [pmid 10506221] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [pmid 9184696] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [pmid 12421819] [evidence IDA]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 1373874] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8949945] [evidence IDA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 9111042] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 9111042] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that modulates the frequency, rate or extent of viral genome replication [goid 45069] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [pmid 9843949] [evidence ISS]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 10620603] [evidence IDA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [evidence IEA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [pmid 9843949] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51902] [pmid 9027314] [evidence TAS]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 10620603] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9111042] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9111042] [evidence IPI]; Interacting selectively with the BH3 domain of a protein of the Bcl-2 family. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death [goid 51434] [pmid 9111042] [evidence IPI]	Bcl-2	Bcl-2
Homo sapiens	RefSeq	NM_000657.2	ILMN_3287	BCL2	NM_000657.2	NM_000657.2		596	72198345	NM_000657.2	BCL2	NP_000648.2	ILMN_1701120	0002480520	I	1150	GGCTCCTGGGGCAATGGGAGGCTGTGGAGCCGGCGAAATAAAATCAGAGT	18	-	60985193-60985242	18q21.33b	Homo sapiens B-cell CLL/lymphoma 2 (BCL2), nuclear gene encoding mitochondrial protein, transcript variant beta, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11530860] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9027314] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 9027314] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 11463392] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 10198631] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 12624108] [evidence EXP]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 1453000] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 1502141] [evidence IDA]	The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [pmid 9027314] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11684014] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9027314] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10506221] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10620603] [evidence IDA]; An immune response mediated through a body fluid [goid 6959] [pmid 1908951] [evidence TAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 11530860] [evidence NAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 8949945] [evidence IDA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 15231831] [evidence EXP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [pmid 15799693] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 16307838] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus [goid 10039] [pmid 11264898] [evidence IDA]; The process by which the anatomical structures of the hair follicle are generated and organized [goid 31069] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a process that reduces the internal pH of a cell [goid 32848] [pmid 10506221] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus [goid 34097] [pmid 9184696] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus [goid 35094] [pmid 12421819] [evidence IDA]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 1373874] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8949945] [evidence IDA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 9111042] [evidence IDA]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 9111042] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that modulates the frequency, rate or extent of viral genome replication [goid 45069] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [evidence IEA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [pmid 9843949] [evidence ISS]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 10620603] [evidence IDA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [evidence IEA]; Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 51881] [pmid 9843949] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51902] [pmid 9027314] [evidence TAS]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 10620603] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9111042] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9111042] [evidence IPI]; Interacting selectively with the BH3 domain of a protein of the Bcl-2 family. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death [goid 51434] [pmid 9111042] [evidence IPI]	Bcl-2	Bcl-2
Homo sapiens	RefSeq	NM_005383.1	ILMN_8347	NEU2	NM_005383.1	NM_005383.1		4759	4885514	NM_005383.1	NEU2	NP_005374.1	ILMN_1752557	0003930632	S	1087	GTCTTTCTCATGTTCACCCTGAAGCAAGCCTTCCCAGCTGAGTACCTGCC	2	+	233607955-233608004	2q37.1d	Homo sapiens sialidase 2 (cytosolic sialidase) (NEU2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8253770] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates [goid 4308] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	SIAL2; MGC129579	SIAL2; MGC129579
Homo sapiens	RefSeq	NM_004884.2	ILMN_24561	IGDCC3	NM_004884.3	NM_004884.3		9543	134244584	NM_004884.3	IGDCC3	NP_004875.2	ILMN_1744635	0004920131	S	2923	CTGGGCTGACGCCCCCTTGCCTCTGCCTGGTACCCACATGACTTGGAACT	15	-	65620971-65621020	15q22.31b	Homo sapiens immunoglobulin superfamily, DCC subclass, member 3 (IGDCC3), mRNA.				HsT18880	HsT18880
Homo sapiens	RefSeq	NM_004884.3	ILMN_24561	IGDCC3	NM_004884.3	NM_004884.3		9543	134244584	NM_004884.3	IGDCC3	NP_004875.2	ILMN_3245650	0006250482	S	4213	TTCCTAGAAAACTAGAGCTGTGTCCGCGTGGACTTGGGGAAGGGTAGTCC	15	-	65619681-65619730	15q22.31b	Homo sapiens immunoglobulin superfamily, DCC subclass, member 3 (IGDCC3), mRNA.				HsT18880	HsT18880
Homo sapiens	RefSeq	NM_001013442.1	ILMN_28280	EPGN	NM_001013442.1	NM_001013442.1		255324	61806621	NM_001013442.1	EPGN	NP_001013460.1	ILMN_1815313	0006580309	S	698	TGAGGAGGACAGCAGGCCCCAAGAAAGTAGGGACTAAGTATGTCTTGTTC	4	+	75179158-75179207	4q13.3e	Homo sapiens epithelial mitogen homolog (mouse) (EPGN), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15611079] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence ISS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 15611079] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor activity [goid 45741] [pmid 15611079] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [pmid 15611079] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence ISS]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor activity [goid 45741] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]	Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence ISS];  [goid 5155] [pmid 15611079] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 15611079] [evidence IDA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IEA];  [goid 5155] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	ALGV3072; EPG; PRO9904; epigen; FLJ75542	ALGV3072; EPG; PRO9904; epigen; FLJ75542
Homo sapiens	RefSeq	NR_024006.1	ILMN_365207	LOC92973	NR_024006.1	NR_024006.1		92973	193211404	NR_024006.1	LOC92973		ILMN_3242362	0007510343	S	4946	GCCTGGGTGTCTGGGTTGTGAAATGGGGTGTCTCCTTCCAGGATTGCCGT	9	+	35865216-35865265	9p13.3a	Homo sapiens hypothetical LOC92973 (LOC92973), non-coding RNA.					
Homo sapiens	RefSeq	NM_001949.2	ILMN_12494	E2F3	NM_001949.2	NM_001949.2		1871	12669913	NM_001949.2	E2F3	NP_001940.1	ILMN_1669502	0003930059	S	4639	TGTTACAGGGTGACCTGTTCTCTAGCTGTGATCTTACCACTTCAAATGGG	6	+	20601815-20601864	6p22.3c	Homo sapiens E2F transcription factor 3 (E2F3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9190208] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8246996] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8246996] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17438371] [evidence IPI]	KIAA0075; E2F-3; MGC104598; DKFZp686C18211	KIAA0075; E2F-3; MGC104598; DKFZp686C18211
Homo sapiens	RefSeq	NM_194436.1	ILMN_6904	LDHD	NM_194436.1	NM_194436.1		197257	37595755	NM_194436.1	LDHD	NP_919417.1	ILMN_2407346	0003370301	A	1778	GTCCTGGCGGGAAGAGAGCGTCTGGGTCCATTCAAGACTCTGATGACACC	16	-	75145928-75145977	16q23.1a	Homo sapiens lactate dehydrogenase D (LDHD), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (R)-lactate + 2 ferricytochrome c = pyruvate + 2 ferrocytochrome c [goid 4458] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12127981] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	MGC57726	MGC57726
Homo sapiens	RefSeq	NM_017693.2	ILMN_181297	BIVM	NM_017693.2	NM_017693.2		54841	22095354	NM_017693.2	BIVM	NP_060163.2	ILMN_2214098	0004220270	S	3444	GAGCTCCTCTAGTTGCTGTTGGTTTTTCTTCTGCTGCCAACCTGTGACTC	13	+	102291469-102291518	13q33.1b	Homo sapiens basic, immunoglobulin-like variable motif containing (BIVM), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC133326	MGC133326
Homo sapiens	RefSeq	XM_926969.1	ILMN_32931	LOC643664	XM_926969.1	XM_926969.1		643664	89041166	XM_926969.1	LOC643664	XP_932062.1	ILMN_1737842	0001030400	S	1113	AAGGGAAGGTGGAGGAGTGAGATAGAACTTGGGAGCCCGGGGGTTGGGAG	17	+	7327025-7327044:7327045-7327074	17p13.1d	PREDICTED: Homo sapiens similar to acyl-malonyl condensing enzyme 1 (LOC643664), mRNA.					
Homo sapiens	RefSeq	XM_001724811.1	ILMN_335809	LOC100134140	XM_001724811.1	XM_001724811.1		100134140	169209463	XM_001724811.1	LOC100134140	XP_001724863.1	ILMN_3200136	0003180274	A	329	CCAGCCTGACTCCTGGAGATTGTGAATAGCTCCATCCAGCCTGAGAAACA					PREDICTED: Homo sapiens similar to LHPE306, transcript variant 2 (LOC100134140), mRNA.					
Homo sapiens	RefSeq	NM_206841.1	ILMN_5292	FRAS1	NM_206841.1	NM_206841.1		80144	45827749	NM_206841.1	FRAS1	NP_996672.1	ILMN_1671318	0007160528	I	6688	GTCCATCAGCTTCTTTTGAAGGGGGCATTTTGTTGCCTGGACTTGCTCTC	4	+	79586695-79586744	4q21.1c-q21.21a	Homo sapiens Fraser syndrome 1 (FRAS1), transcript variant 2, mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which the anatomical structures of epithelia are generated and organized. Morphogenesis pertains to the creation of form. An epithelium consists of closely packed cells arranged in one or more layers, that covers the outer surfaces of the body or lines any internal cavity or tube [goid 2009] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1500; FLJ22031; FLJ14927; DKFZp686I05113	KIAA1500; FLJ22031; FLJ14927; DKFZp686I05113
Homo sapiens	Unigene	Hs.549810	ILMN_110076	HS.549810	Hs.549810		Hs.549810		27878739	BX112035			ILMN_1875031	0004810095	S	365	ACCGGACAACAGCCAGTGCAAGGTTCAGCGCCTCGATAACAGTCCAACGC	11	-	125462730-125462779		BX112035 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998F061864, mRNA sequence					
Homo sapiens	RefSeq	NM_004585.2	ILMN_1164	RARRES3	NM_004585.3	NM_004585.3		5920	149588790	NM_004585.3	RARRES3	NP_004576.2	ILMN_1701613	0002650564	S	485	GGCCACGGCGCTTGGAATCCTGGTTGTTGCTGGATGCTCTTTTGCGATTA	11	+	63070226-63070275	11q12.3b	Homo sapiens retinoic acid receptor responder (tazarotene induced) 3 (RARRES3), mRNA.		Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9843971] [evidence TAS]		MGC8906; HRASLS4; TIG3; RIG1	MGC8906; HRASLS4; TIG3; RIG1
Homo sapiens	RefSeq	NM_182936.1	ILMN_5196	SLC8A3	NM_182936.1	NM_182936.1		6547	33946307	NM_182936.1	SLC8A3	NP_891981.1	ILMN_1770987	0001170372	I	5	CTCTTCCAGCATGGAGCCGAAAACCTAGGGAATGACAGCTAGAGGCATCC	14	-	70546864-70546913	14q24.2a	Homo sapiens solute carrier family 8 (sodium/calcium exchanger), member 3 (SLC8A3), transcript variant f, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NCX3	NCX3
Homo sapiens	RefSeq	NM_183002.1	ILMN_5196	SLC8A3	NM_182936.1	NM_182936.1		6547	33946307	NM_182936.1	SLC8A3	NP_891981.1	ILMN_1712023	0007550301	A	2518	GATCTCCGTGCCCTACAGACCTTTTCTCAACGAATGTGGGAAGGACCTGG	14	-	70511211-70511260	14q24.2a	Homo sapiens solute carrier family 8 (sodium/calcium exchanger), member 3 (SLC8A3), transcript variant f, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in) [goid 5432] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NCX3	NCX3
Homo sapiens	RefSeq	XM_940631.1	ILMN_43712	LOC149069	XM_940631.1	XM_940631.1		149069	88947805	XM_940631.1	LOC149069	XP_945724.1	ILMN_1771636	0003400102	S	121	TGCGAGGTGACATCAGCTGTGCAGGCCCCACTGGCTGTGCGTGCCCTCTA				1p35.1b	PREDICTED: Homo sapiens similar to Doublecortin domain-containing protein 2 (RU2S protein) (LOC149069), mRNA.					
Homo sapiens	RefSeq	XM_942569.1	ILMN_309438	KIAA1614	NM_020950.1	NM_020950.1		57710	149274645	NM_020950.1	KIAA1614	NP_066001.1	ILMN_1707128	0004060465	A	3227	GTGTCACCCTCTCACCAGCGTCGGAAAGCTGCCTCTTTTCAGAACCTCCA	1	+	179180148-179180197	1q25.3a	Homo sapiens KIAA1614 (KIAA1614), mRNA.				RP11-46A10.3	
Homo sapiens	RefSeq	NR_015339.1	ILMN_336213	C8ORF83	NR_015339.1	NR_015339.1		286144	167234186	NR_015339.1	C8orf83		ILMN_3243899	0003780021	S	2843	ACTGGGAAGCAGCCAACCCTCTGTAGAGAAATCCCAGATTGGGAGTCTGG	8	-	93896500-93896549	8q22.1a	Homo sapiens chromosome 8 open reading frame 83 (C8orf83), non-coding RNA.				FLJ40637; DKFZp779L1068	FLJ40637; DKFZp779L1068
Homo sapiens	Unigene	Hs.540335	ILMN_105089	HS.540335	Hs.540335		Hs.540335		19734076	BQ009175			ILMN_1892519	0004590093	S	442	GTGGGCGTCTGAGGGCTACTCCTGCCGGGAAAGCAGTCTCATTTGTTCAT	15	+	36944730-36944779		UI-H-ED1-axx-k-12-0-UI.s1 NCI_CGAP_ED1 Homo sapiens cDNA clone IMAGE:5835011 3, mRNA sequence					
Homo sapiens	RefSeq	NM_013304.1	ILMN_29630	ZDHHC1	NM_013304.1	NM_013304.1		29800	24307962	NM_013304.1	ZDHHC1	NP_037436.1	ILMN_2094313	0003370093	S	1968	CCCACGACTCAGCAATACCCGCCCCACCGGCTGTGATGCTCCAATAAACT	16	-	65985852-65985901	16q22.1b	Homo sapiens zinc finger, DHHC-type containing 1 (ZDHHC1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10395086] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10395086] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF377; C16orf1; HSU90653	ZNF377; C16orf1; HSU90653
Homo sapiens	RefSeq	XM_498390.2	ILMN_31065	LOC442465	XM_498390.2	XM_498390.2		442465	89060242	XM_498390.2	LOC442465	XP_498390.2	ILMN_1791875	0004070497	A	71	ACCTGTGCAGGGCGCCAGAGTCCCTAGGAGAAGGCTCTCGCTCAGTGGGT	X	-	134649756-134649805	Xq26.3a-q26.3b	PREDICTED: Homo sapiens similar to sarcoma antigen 1 (LOC442465), mRNA.					
Homo sapiens	RefSeq	NM_001017418.1	ILMN_1283	SPRR2B	NM_001017418.1	NM_001017418.1		6701	62955830	NM_001017418.1	SPRR2B	NP_001017418.1	ILMN_1806059	0001710672	S	496	AGGAACCTTGGCTTTGTCAGTTCCCAGAGCTTCAGCAGAAAGAGCTGCAG	1	-	153042833-153042882	1q21.3c	Homo sapiens small proline-rich protein 2B (SPRR2B), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [pmid 8325635] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 8325635] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [pmid 8325635] [evidence NAS]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Homo sapiens	RefSeq	XR_042339.1	ILMN_346856	LOC442160	XR_042339.1	XR_042339.1		442160	169169577	XR_042339.1	LOC442160		ILMN_3289364	0000460152	M	181	GCCCCAAGTGTTACCATGGCTAAATGGGAAGAGTCTGCAGTGTTCCCCAG	6	-	10322376-10322425	6p24.3a	PREDICTED: Homo sapiens misc_RNA (LOC442160), miscRNA.					
Homo sapiens	Unigene	Hs.25131	ILMN_71944	HS.25131	Hs.25131		Hs.25131		83135217	DB304963			ILMN_1844691	0004200528	S	397	AGGTGTAAGCACCCTTTCAGGGCACTGGATGTCATATAGGAAGTTACAGG	3	-	122625850-122625899		DB304963 BRAWH3 Homo sapiens cDNA clone BRAWH3012387 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020832.1	ILMN_24389	ZNF687	NM_020832.1	NM_020832.1		57592	24308226	NM_020832.1	ZNF687	NP_065883.1	ILMN_1662952	0003840703	S	4269	CCAACTCACTGGCACTCAAGCCCCCTACCCCTGCAGTGCCTTTCACTTCT	1	+	149530766-149530815	1q21.2d	Homo sapiens zinc finger protein 687 (ZNF687), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP11-126K1.3; KIAA1441; DKFZp781I1719	RP11-126K1.3; KIAA1441; DKFZp781I1719
Homo sapiens	RefSeq	NR_001550.1	ILMN_9661	TTTY18	NR_001550.1	NR_001550.1		252950	32563552	NR_001550.1	TTTY18		ILMN_1661523	0001400139	S	172	TCTGAGAGCCAGGAGCCCGAGTCTGTCTCAAGAACTTGCACATGCCTGTC	Y	-	8551919-8551919:8611411-8611459	Yp11.2e	Homo sapiens testis-specific transcript, Y-linked 18 (non-protein coding) (TTTY18), non-coding RNA.					
Homo sapiens	RefSeq	NR_001550.1	ILMN_9661	TTTY18	NR_001550.1	NR_001550.1		252950	32563552	NR_001550.1	TTTY18		ILMN_2089365	0000050551	S	152	ATCTTAGGCAGGGTGACAGCTCTGAGAGCCAGGAGCCCGAGTCTGTCTCA	Y	-	8611430-8611473:8611762-8611767	Yp11.2e	Homo sapiens testis-specific transcript, Y-linked 18 (non-protein coding) (TTTY18), non-coding RNA.					
Homo sapiens	RefSeq	NM_018527.2	ILMN_9228	NARG1L	NM_018527.2	NM_018527.2		79612	33356129	NM_018527.2	NARG1L	NP_060997.2	ILMN_1685446	0007150091	I	1453	CCTTGGAGTTTTTTCTTTGTGGAAACAAGTTCTAGGGCACCCTGATAATC	13	+	40830665-40830714	13q14.11b	Homo sapiens NMDA receptor regulated 1-like (NARG1L), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	The acetylation of the N-terminal amino acid of proteins [goid 6474] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [evidence ISS]; Interacting selectively with any part of a ribosome [goid 43022] [evidence ISS]	MGC40612; RP11-396A22.1	MGC40612; RP11-396A22.1
Homo sapiens	RefSeq	XM_496603.2	ILMN_35023	LOC440917	XM_937554.2	XM_937554.2		440917	113414037	XM_937554.2	LOC440917	XP_942647.1	ILMN_1657421	0005690288	S	221	CTATCTGTTGCATATGAGAATGTGATTGGAGCTAGAAGAACCTCCTGGAG				2q22.1b	PREDICTED: Homo sapiens similar to 14-3-3 protein epsilon (14-3-3E) (Mitochondrial import stimulation factor L subunit) (MSF L) (LOC440917), mRNA.					
Homo sapiens	Unigene	Hs.541235	ILMN_105614	HS.541235	Hs.541235		Hs.541235		19737112	BQ012211			ILMN_1834901	0006550241	S	269	ggggACTGAGATGCACAGGGGCCAGAGACCTTGAGAGACGCAACAGAGAT					UI-1-BC1p-asm-a-07-0-UI.s1 NCI_CGAP_Pl3 Homo sapiens cDNA clone UI-1-BC1p-asm-a-07-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003659.1	ILMN_138634	AGPS	NM_003659.1	NM_003659.1		8540	4501992	NM_003659.1	AGPS	NP_003650.1	ILMN_1698209	0007560154	S	1910	CTGATGTCGGCTTTGGGATGCTGAAGTCTGTCAAGGAATATGTGGACCCC	2	+	178111087-178111136	2q31.2a	Homo sapiens alkylglycerone phosphate synthase (AGPS), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 9553082] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10215861] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9553082] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9187299] [evidence TAS]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [pmid 9553082] [evidence IDA]	Catalysis of the reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = 1-alkyl-glycerone 3-phosphate + a long-chain acid anion [goid 8609] [pmid 9553082] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	ADHAPS; ADAP-S; ADPS; ALDHPSY; ADAS	ADHAPS; ADAP-S; ADPS; ALDHPSY; ADAS
Homo sapiens	RefSeq	NM_004051.3	ILMN_181978	BDH1	NM_203314.2	NM_203314.2		622	82880652	NM_203314.2	BDH1	NP_976059.1	ILMN_1799280	0005490593	A	1368	GTGGCTGCGAATGCAGATCATGACCCACTTGCCTGGAGCCATCTCCGACA	3	-	198723179-198723228	3q29h	Homo sapiens 3-hydroxybutyrate dehydrogenase, type 1 (BDH1), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 1639787] [evidence EXP]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [pmid 92348395] [evidence TAS]; Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [pmid 1639787] [evidence EXP]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC4347; MGC9788; BDH; MGC2723	MGC4347; MGC9788; MGC2723
Homo sapiens	RefSeq	NM_203314.1	ILMN_181978	BDH1	NM_203314.2	NM_203314.2		622	82880652	NM_203314.2	BDH1	NP_976059.1	ILMN_1683471	0002490437	I	267	CTTTGAGGGGTTGCAGAAGCACATATTTCACTATGGAGGGCCGCCTGCAG	3	-	198765872-198765921	3q29h	Homo sapiens 3-hydroxybutyrate dehydrogenase, type 1 (BDH1), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence NAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 1639787] [evidence EXP]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [pmid 92348395] [evidence TAS]; Catalysis of the reaction: (R)-3-hydroxybutanoate + NAD+ = acetoacetate + NADH + H+ [goid 3858] [pmid 1639787] [evidence EXP]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC4347; MGC9788; BDH; MGC2723	MGC4347; MGC9788; MGC2723
Homo sapiens	RefSeq	NM_182966.1	ILMN_11885	NEDD9	NM_006403.2	NM_006403.2		4739	33667045	NM_006403.2	NEDD9	NP_006394.1	ILMN_1726164	0007400521	A	547	TATCAGGTGCCACCATCAGTGCAGAGAAGCATTGGGGGAACCAGTGGGCC	6	-	11321515-11321564	6p24.1c	Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8668148] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9584194] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 9584194] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 11827972] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9584194] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8668148] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11827972] [evidence NAS]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [pmid 11827972] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11827972] [evidence IPI]	dJ761I2.1; dJ49G10.2; CAS-L; HEF1; CASL	dJ761I2.1; dJ49G10.2; CAS-L; HEF1; CASL; neural
Homo sapiens	RefSeq	NM_006403.2	ILMN_11885	NEDD9	NM_006403.2	NM_006403.2		4739	33667045	NM_006403.2	NEDD9	NP_006394.1	ILMN_1758719	0001010328	I	3896	CACCACAAGCCATCAGGTTCTTCATGGGGCAGGTGAAATACTTCTACCCC	6	-	11292093-11292142	6p24.1c	Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8668148] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9584194] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 9584194] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 11827972] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9584194] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8668148] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11827972] [evidence NAS]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [pmid 11827972] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11827972] [evidence IPI]	dJ761I2.1; dJ49G10.2; CAS-L; HEF1; CASL	dJ761I2.1; dJ49G10.2; CAS-L; HEF1; CASL
Homo sapiens	RefSeq	NM_006403.2	ILMN_11885	NEDD9	NM_006403.2	NM_006403.2		4739	33667045	NM_006403.2	NEDD9	NP_006394.1	ILMN_2261076	0006180048	I	4374	CTTAGGAGATGGCTGACTTGATTGATCTACGCTAAGTGGAGACATTTCAC	6	-	11291615-11291664	6p24.1c	Homo sapiens neural precursor cell expressed, developmentally down-regulated 9 (NEDD9), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8668148] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9584194] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 9584194] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 11827972] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9584194] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8668148] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11827972] [evidence NAS]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [pmid 11827972] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11827972] [evidence IPI]	dJ761I2.1; dJ49G10.2; CAS-L; HEF1; CASL	dJ761I2.1; dJ49G10.2; CAS-L; HEF1; CASL
Homo sapiens	RefSeq	NM_004551.1	ILMN_6465	NDUFS3	NM_004551.1	NM_004551.1		4722	4758787	NM_004551.1	NDUFS3	NP_004542.1	ILMN_1756355	0001710168	S	777	AGCCGGAGACAAGAAGCCTGATGCCAAGTAGCTCCAGGGAACGCATGTGG	11	+	47562579-47562609:47562610-47562628	11p11.2b	Homo sapiens NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) (NDUFS3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9647766] [evidence NAS]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 17209039] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9647766] [evidence NAS]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [pmid 16826196] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 16826196] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 16826196] [evidence IMP]	Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [pmid 11112787] [evidence IMP]; Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [pmid 16826196] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18485875] [evidence IPI]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9647766] [evidence NAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9647766] [evidence NAS]		
Homo sapiens	RefSeq	XR_039146.1	ILMN_335331	LOC100133277	XR_039146.1	XR_039146.1		100133277	169167419	XR_039146.1	LOC100133277		ILMN_3275936	0001850634	M	1130	GTCCAAAATGCCTGTTTAGTTTTTAAAGATCAACTCCACCCTTTGCTTGG	5	-	93044096-93044145	5q15b	PREDICTED: Homo sapiens misc_RNA (LOC100133277), miscRNA.					
Homo sapiens	RefSeq	XR_016302.2	ILMN_175539	LOC286456	XR_016302.2	XR_016302.2		286456	169216726	XR_016302.2	LOC286456		ILMN_3283550	0005870278	M	1028	TGGCTAGAGCTAAGAGTGAAGAACTCGCAGCCCTTAGTTCACAGCAGCCC	X	-	150145721-150145770	Xq28d	PREDICTED: Homo sapiens misc_RNA (LOC286456), miscRNA.					
Homo sapiens	RefSeq	XM_945628.1	ILMN_45677	MGC57359	XM_945628.1	XM_945628.1		441272	89026196	XM_945628.1	MGC57359	XP_950721.1	ILMN_1744623	0005290072	I	438	TCTCCTCACTGCCCTGCTGCTCCCATGGAAACCCTGTCCTGCTTCTCACG				7q22.1c	PREDICTED: Homo sapiens similar to Williams Beuren syndrome chromosome region 19, transcript variant 5 (MGC57359), mRNA.					
Homo sapiens	RefSeq	XM_925955.1	ILMN_163641	LOC642278	XM_001127357.1	XM_001127357.1		642278	113421799	XM_001127357.1	LOC642278	XP_001127357.1	ILMN_1695960	0004070685	S	268	AGCTCCTGGGGAGGGTTCATGTGTCAGTCAGGTTCTCTCCAAGCGTCCCT				10p15.3d	PREDICTED: Homo sapiens hypothetical LOC642278 (LOC642278), mRNA.					
Homo sapiens	RefSeq	NM_207107.2	ILMN_27409	UCHL5IP	NM_207107.2	NM_207107.2		55559	66346719	NM_207107.2	UCHL5IP	NP_996990.1	ILMN_1694890	0006350750	I	1126	TCCGAGCCTTCCAACCTCTGACTGGCTGGTCCTGTGAGACCCCTCGATCA	X	-	152373534-152373583	Xq28f	Homo sapiens UCHL5 interacting protein (UCHL5IP), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 16395595] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [pmid 11163772] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [pmid 11163772] [evidence NAS]	Interacting selectively with any thioesterase enzyme [goid 31996] [pmid 11163772] [evidence IPI]	HSXQ28ORF; UIP1	HSXQ28ORF; UIP1
Homo sapiens	RefSeq	NM_130767.1	ILMN_12512	ACOT12	NM_130767.1	NM_130767.1		134526	18640735	NM_130767.1	ACOT12	NP_570123.1	ILMN_1785474	0002070181	S	1439	GTCGGTCATTTTGCCATCGGTCCCCCCGTCTCCACAGTACATCAGAAGTG	5	-	80662441-80662490	5q14.1f	Homo sapiens acyl-CoA thioesterase 12 (ACOT12), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]	The chemical reactions and pathways involving acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis [goid 6084] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence ISS]	Catalysis of the reaction: acetyl-CoA + H2O = CoA + acetate [goid 3986] [evidence ISS]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CACH-1; THEAL; Cach; MGC105114; STARD15	THEAL; Cach; MGC105114; CACH-1; STARD15
Homo sapiens	RefSeq	NM_203468.1	ILMN_21052	ENTPD2	NM_203468.1	NM_203468.1		954	45827717	NM_203468.1	ENTPD2	NP_982293.1	ILMN_1651599	0006580138	I	1221	CCAGGGCAACGGGCCCGCCTGGCCGACTACTGCGCCGGGGCCATGTTCGT	9	-	139943462-139943511	9q34.3e	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 2 (ENTPD2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	NTPDase-2; CD39L1	NTPDase-2; CD39L1
Homo sapiens	RefSeq	NM_003462.3	ILMN_24038	DNALI1	NM_003462.3	NM_003462.3		7802	37595559	NM_003462.3	DNALI1	NP_003453.2	ILMN_1745501	0006200309	S	2489	AGGTTGAGGAGGCTTTATTTCCCTAGCACTGGTGAAGGGCTTCAACTGTC	1	+	37804885-37804934	1p34.3c	Homo sapiens dynein, axonemal, light intermediate chain 1 (DNALI1), mRNA.	A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [pmid 9284741] [evidence TAS]; The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements [goid 5930] [pmid 9284741] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9284741] [evidence TAS]; The union of male and female gametes to form a zygote [goid 7338] [pmid 9284741] [evidence TAS]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 9284741] [evidence TAS]	P28; hp28; dJ423B22.5	P28; hp28; dJ423B22.5
Homo sapiens	RefSeq	NR_003362.1	ILMN_171969	SNORD115-48	NR_003362.1	NR_003362.1		100033822	126032314	NR_003362.1	SNORD115-48		ILMN_3308113	0005900551	S	26	AGAGAAATGATGACGTAAAAATTAAGTTCAGTTGGATTACGCTGAGGCCC	15	+	23066048-23066097	15q11.2e	Homo sapiens small nucleolar RNA, C/D box 115-48 (SNORD115-48), small nucleolar RNA.				HBII-52-48	HBII-52-48
Homo sapiens	Unigene	Hs.541100	ILMN_105537	HS.541100	Hs.541100		Hs.541100		3418952	AI082160			ILMN_1881538	0002570626	S	272	TTCCCAGAGGGTCACCCCAGTGTGGATGGGGGAGTCTTCTACCCTTCCTA	18	-	22659425-22659474		ov43g05.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1640120 3, mRNA sequence					
Homo sapiens	RefSeq	XR_015564.1	ILMN_168064	LOC729495	XR_015564.1	XR_015564.1		729495	113429372	XR_015564.1	LOC729495		ILMN_3297510	0006860242	M	947	TCCCCGACACCAAGACCTACTGCTTCGACGCCTTCCCTAACATCGAGAAG	22	-	19352321-19352370	22q11.21e	PREDICTED: Homo sapiens similar to hCG1999863 (LOC729495), mRNA.					
Homo sapiens	RefSeq	XM_001718866.1	ILMN_350864	LOC100130591	XM_001718866.1	XM_001718866.1		100130591	169171590	XM_001718866.1	LOC100130591	XP_001718918.1	ILMN_3271312	0001770021	M	288	ATAAATCTGAATAGAAATATCCATTTTCCTGGGTTTTATCCTTCTGTACA				7q36.1e	PREDICTED: Homo sapiens hypothetical protein LOC100130591 (LOC100130591), mRNA.					
Homo sapiens	RefSeq	XR_000955.1	ILMN_46428	LOC283711	XR_000955.1	XR_000955.1		283711	89038161	XR_000955.1	LOC283711		ILMN_1777687	0006110092	S	3389	AGCTGGACTTCTGGGTGGGGCGGGGACTTGGAGAACTTTTCTGTCTTACA	15	+	29483831-29483880	15q13.3a	PREDICTED: Homo sapiens hypothetical protein LOC283711 (LOC283711), misc RNA.					
Homo sapiens	RefSeq	NM_014632.2	ILMN_27460	MICAL2	NM_014632.2	NM_014632.2		9645	41281417	NM_014632.2	MICAL2	NP_055447.1	ILMN_1785141	0001430463	S	3607	GAAGGCAGCCCCCCAGTTCATTTCAGCCTTCCAGTGCTACACCCACTTCT	11	+	12222218-12222235:12225797-12225828	11p15.3b-p15.3a	Homo sapiens microtubule associated monoxygenase, calponin and LIM domain containing 2 (MICAL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells [goid 6725] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0750; DKFZp686H2469; MICAL2PV1; MICAL2PV2; DKFZp686H03148	KIAA0750; DKFZp686H2469; MICAL2PV1; MICAL2PV2; DKFZp686H03148
Homo sapiens	RefSeq	XM_941471.1	ILMN_42849	LOC652134	XM_941471.1	XM_941471.1		652134	89067193	XM_941471.1	LOC652134	XP_946564.1	ILMN_1781465	0002370411	S	45	CACCAAACAGCAACAGTTTCAGTCACCACCTACGATGTTGTGGGGGGCTT					PREDICTED: Homo sapiens similar to N-ethylmaleimide sensitive fusion protein (LOC652134), mRNA.					
Homo sapiens	RefSeq	NM_018646.2	ILMN_29216	TRPV6	NM_018646.2	NM_018646.2		55503	21314681	NM_018646.2	TRPV6	NP_061116.2	ILMN_1674533	0001110156	S	2761	ACCCAGGCAGGTGCAGGGAAGTGCAGAGCTTGTGGAAAGCGTGTGAGTGA	7	-	142569043-142569092	7q34f	Homo sapiens transient receptor potential cation channel, subfamily V, member 6 (TRPV6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11278579] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 11278579] [evidence NAS]; Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis [goid 17158] [pmid 11278579] [evidence NAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [pmid 15184369] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 11278579] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	ABP/ZF; CAT1; HSA277909; ECAC2; ZFAB; CATL; LP6728	ABP/ZF; CAT1; HSA277909; ECAC2; ZFAB; CATL; LP6728
Homo sapiens	RefSeq	NM_018646.2	ILMN_29216	TRPV6	NM_018646.2	NM_018646.2		55503	21314681	NM_018646.2	TRPV6	NP_061116.2	ILMN_2368188	0003390402	A	2509	GAGTAGCATGAACGCCAAGGAATGTACGTTGAGAATCACTGCTCCAGGCC	7	-	142569295-142569344	7q34f	Homo sapiens transient receptor potential cation channel, subfamily V, member 6 (TRPV6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11278579] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 11278579] [evidence NAS]; Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis [goid 17158] [pmid 11278579] [evidence NAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [pmid 15184369] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 11278579] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	ABP/ZF; CAT1; HSA277909; ECAC2; ZFAB; CATL; LP6728	ABP/ZF; CAT1; HSA277909; ECAC2; ZFAB; CATL; LP6728
Homo sapiens	RefSeq	NM_018646.2	ILMN_29216	TRPV6	NM_018646.2	NM_018646.2		55503	21314681	NM_018646.2	TRPV6	NP_061116.2	ILMN_2272412	0007570204	I	229	CTGCCCAAGGAGAAAGGGCTAATTCTCTGCCTATGGAGCAAGTTCTGCAG	7	-	142583199-142583248	7q34f	Homo sapiens transient receptor potential cation channel, subfamily V, member 6 (TRPV6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11278579] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 11278579] [evidence NAS]; Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis [goid 17158] [pmid 11278579] [evidence NAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [pmid 15184369] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 11278579] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	ABP/ZF; CAT1; HSA277909; ECAC2; ZFAB; CATL; LP6728	ABP/ZF; CAT1; HSA277909; ECAC2; ZFAB; CATL; LP6728
Homo sapiens	RefSeq	NM_000772.1	ILMN_4940	CYP2C18	NM_000772.1	NM_000772.1		1562	13699815	NM_000772.1	CYP2C18	NP_000763.1	ILMN_1683121	0004860307	S	1605	TCACCCCCATTGCCAATGCATTTGGTCGTGTGCCACCCTTGTACCAGCTC	10	+	96485124-96485173	10q23.33c	Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 18 (CYP2C18), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [pmid 8110777] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 8110777] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	CYP2C17; DKFZp686I24235; CPCI; CYP2C; P450-6B/29C; P450IIC17	CYP2C17; DKFZp686I24235; CPCI; CYP2C; P450-6B/29C; P450IIC17
Homo sapiens	RefSeq	NM_001098802.1	ILMN_308111	CEP78	NM_001098802.1	NM_001098802.1		84131	149274620	NM_001098802.1	CEP78	NP_001092272.1	ILMN_3185161	0005570142	A	2227	GGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGGATTCATTGC	9	+	80071280-80071329	9q21.2c	Homo sapiens centrosomal protein 78kDa (CEP78), transcript variant 1, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]			IP63; MGC135040; C9orf81; FLJ12643	C9orf81; IP63; MGC135040; FLJ12643
Homo sapiens	RefSeq	NM_033208.2	ILMN_163976	TIGD7	NM_033208.2	NM_033208.2		91151	22325391	NM_033208.2	TIGD7	NP_149985.2	ILMN_1676905	0004640438	S	2374	CCTAGGCCTCATAATATTAAGGACTCCTTCAGTGGGCCTTCAACTTCTGG	16	-	3348977-3349026	16p13.3c	Homo sapiens tigger transposable element derived 7 (TIGD7), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	Sancho	Sancho
Homo sapiens	RefSeq	XM_932540.1	ILMN_31917	LOC644963	XM_932540.1	XM_932540.1		644963	88943201	XM_932540.1	LOC644963	XP_937633.1	ILMN_1673802	0000840152	S	181	GGATGCTGCGCAGCTCCTCTCTGCACTATCTATCAGAACGTTGCTCTGCG	1	-	146135069-146135118		PREDICTED: Homo sapiens hypothetical protein LOC644963 (LOC644963), mRNA.					
Homo sapiens	RefSeq	XM_928858.1	ILMN_168315	LOC728635	XM_001131304.1	XM_001131304.1		728635	113424542	XM_001131304.1	LOC728635	XP_001131304.1	ILMN_1676014	0003990521	I	484	TTGGCCATAGAGCTGGCCCCAAGGAACATTAGGGTGAACTGCCTAGCACC	14	+	23587780-23587829	14q11.2g	PREDICTED: Homo sapiens similar to peroxisomal short-chain alcohol dehydrogenase, transcript variant 1 (LOC728635), mRNA.					
Homo sapiens	RefSeq	NM_212503.1	ILMN_20580	PCTK3	NM_212503.1	NM_212503.1		5129	47078232	NM_212503.1	PCTK3	NP_997668.1	ILMN_1784110	0001660025	A	2952	CTGTATCCCCCAGGTCTCCTCAACACTGGGCTGATCCTGAATGGCACAGG	1	+	203768347-203768396	1q32.1g	Homo sapiens PCTAIRE protein kinase 3 (PCTK3), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16091426] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PCTAIRE3; PCTAIRE	PCTAIRE3; PCTAIRE
Homo sapiens	RefSeq	NM_212503.1	ILMN_20580	PCTK3	NM_212503.1	NM_212503.1		5129	47078232	NM_212503.1	PCTK3	NP_997668.1	ILMN_1668067	0007200491	I	532	TGCACGCACAAGGGTGTGCACAGGAGGGCAGCTGCCTTACAGCCAGACTT	1	+	203759416-203759465	1q32.1g	Homo sapiens PCTAIRE protein kinase 3 (PCTK3), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16091426] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PCTAIRE3; PCTAIRE	PCTAIRE3; PCTAIRE
Homo sapiens	RefSeq	NM_006375.2	ILMN_10105	ENOX2	NM_006375.2	NM_006375.2		10495	32528292	NM_006375.2	ENOX2	NP_006366.2	ILMN_2415911	0001500487	A	3253	CCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCA	X	-	129758381-129758430	Xq25h-q26.1a	Homo sapiens ecto-NOX disulfide-thiol exchanger 2 (ENOX2), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8150545] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [pmid 11488599] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The specific actions or reactions of an organism that recur with a regularity more frequent than every 24 hours [goid 7624] [pmid 12356293] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds [goid 15035] [pmid 1888291] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	COVA1; tNOX; APK1	COVA1; tNOX; APK1
Homo sapiens	RefSeq	NR_003594.1	ILMN_309703	REXO1L2P	NR_003594.1	NR_003594.1		441362	149944542	NR_003594.1	REXO1L2P		ILMN_3242842	0004150647	S	864	CTCCCTCAGGAATCTCGCGGCCGACTACCTGGCACAGATCATCCAGGACA	8	-	86884448-86884497	8q21.2b	Homo sapiens REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 2 (pseudogene) (REXO1L2P), non-coding RNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	GOR	GOR
Homo sapiens	RefSeq	NM_004756.2	ILMN_36397	NUMBL	NM_004756.3	NM_004756.3		9253	87042273	NM_004756.3	NUMBL	NP_004747.1	ILMN_1651538	0004200121	S	2651	GGGTCCGGGAAGAAGGGGAAGGGGTGCCTGGCGGGTACTTTTCTATCTTT	19	-	45864510-45864559	19q13.2b	Homo sapiens numb homolog (Drosophila)-like (NUMBL), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9303539] [evidence TAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	NUMB-R; TNRC23; CTG3a; CAG3A; NUMBR; NBL	NUMB-R; TNRC23; CTG3a; CAG3A; NUMBR; NBL
Homo sapiens	RefSeq	XM_926415.1	ILMN_39099	LOC653115	XM_926415.1	XM_926415.1		653115	88963248	XM_926415.1	LOC653115	XP_931508.1	ILMN_1781251	0004890008	A	1230	GGTTTTTGGCTGGGTAAGGTTTGTAGTTGACAGTAAAACCTGATGACCCC	3	+	75347550-75347599	3p12.3d	PREDICTED: Homo sapiens similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 1 (LOC653115), mRNA.					
Homo sapiens	RefSeq	XM_001718705.1	ILMN_343604	LOC100133554	XM_001718705.1	XM_001718705.1		100133554	169214022	XM_001718705.1	LOC100133554	XP_001718757.1	ILMN_3285768	0001400161	M	3	GACTGTCGTCCCAAGAAATCAGCAGAAACGGCCTTCACCGAGTGCTAAGC					PREDICTED: Homo sapiens hypothetical LOC100133554 (LOC100133554), mRNA.					
Homo sapiens	RefSeq	XM_001718705.1	ILMN_343604	LOC100133554	XM_001718705.1	XM_001718705.1		100133554	169214022	XM_001718705.1	LOC100133554	XP_001718757.1	ILMN_3209255	0006200050	A	83	AGAGGCTTCTGCGGGGCGAGGAGGGGTCGTTTTCCCACGAACTCTTCAGG					PREDICTED: Homo sapiens hypothetical LOC100133554 (LOC100133554), mRNA.					
Homo sapiens	RefSeq	XM_001134163.1	ILMN_175176	LOC730007	XM_001134163.1	XM_001134163.1		730007	113424655	XM_001134163.1	LOC730007	XP_001134163.1	ILMN_3300646	0000290228	M	181	TTGGAACTATTAGGGGGGAAGATAAAAAGCCAGGGAACTGGGGAGATGCC	14	-	79508533-79508550:79510053-79510084	14q31.1a-q31.1b	PREDICTED: Homo sapiens hypothetical LOC730007 (LOC730007), mRNA.					
Homo sapiens	RefSeq	NM_003019.4	ILMN_8973	SFTPD	NM_003019.4	NM_003019.4		6441	61699225	NM_003019.4	SFTPD	NP_003010.4	ILMN_1768575	0006510270	S	1131	GGGCTTGTGGAGAAAAGCGTCTTGTGGTCTGCGAGTTCTGAGCCAACTGG	10	-	81697638-81697687	10q22.3f	Homo sapiens surfactant protein D (SFTPD), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9751757] [evidence TAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 10485905] [evidence TAS]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [pmid 10485905] [evidence TAS]	Any process that modulates the frequency, rate, or extent of production of a cytokine [goid 1817] [pmid 9751757] [evidence NAS]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [pmid 10485905] [evidence TAS]; The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 10485905] [evidence TAS]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [pmid 10485905] [evidence TAS]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [pmid 9751757] [evidence IMP]; Any process involved in the maintenance of an equilibrium of the surface-active lipoprotein mixture which coats the alveoli [goid 43129] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45085] [pmid 10485905] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 10485905] [evidence TAS]; The movement of a macrophage in response to an external stimulus [goid 48246] [pmid 10485905] [evidence TAS]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence ISS]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [pmid 9751757] [evidence IMP]; The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways [goid 48286] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [pmid 10485905] [evidence TAS]; Any process that modulates the surface tension of a liquid. Surface tension is the property that makes a liquid behave as if it had an elastic skin on its surface at the interface with a gas or an immiscible liquid [goid 50828] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 10485905] [evidence TAS]; Interacting selectively with any part of a bacterial cell [goid 8367] [pmid 9751757] [evidence TAS]	PSP-D; SP-D; SFTP4; COLEC7	PSP-D; SP-D; SFTP4; COLEC7
Homo sapiens	RefSeq	XR_017364.2	ILMN_163818	LOC653381	XR_017364.2	XR_017364.2		653381	169208062	XR_017364.2	LOC653381		ILMN_3250132	0007650075	A	4388	CCTGCCTCAGTTTCCCAAAGCACTGAGATTACAGGCATGAGCCACCATGC	15	-	42903297-42903346	15q21.1a	PREDICTED: Homo sapiens misc_RNA (LOC653381), miscRNA.					
Homo sapiens	RefSeq	XM_001130603.1	ILMN_179869	LOC729911	XM_001130603.1	XM_001130603.1		729911	113425759	XM_001130603.1	LOC729911	XP_001130603.1	ILMN_3224830	0006860128	A	457	GAGGAGCAGAGGCCAGCAGGAAACAGCAAATGCAGAGGCCCAAAGTGACC				15q25.1a	PREDICTED: Homo sapiens hypothetical LOC729911 (LOC729911), mRNA.					
Homo sapiens	RefSeq	NM_001101393.1	ILMN_340524	LOC645993	NM_001101393.1	NM_001101393.1		645993	157426832	NM_001101393.1	LOC645993	NP_001094863.1	ILMN_3240077	0001090224	S	141	AGAGCTCCGGAAACTTGCCCTGAAGGAGATGGGAACTCCAGATGCACACT	17	-	59739592-59739641	17q23.3b	Homo sapiens similar to ribosomal protein L31 (LOC645993), mRNA.					
Homo sapiens	RefSeq	NM_139055.1	ILMN_3416	ADAMTS15	NM_139055.1	NM_139055.1		170689	21265057	NM_139055.1	ADAMTS15	NP_620686.1	ILMN_1683781	0006520458	S	2713	TGCTCCAAGAGCTGCGGCCGGGGATTTCAGAGGCGCTCACTCAAGTGTGT	11	+	129848786-129848835	11q24.3c	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 15 (ADAMTS15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate or extent of nitrogen utilization [goid 6808] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Modulates the activity of an enzyme [goid 30234] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126403	MGC126403
Homo sapiens	RefSeq	NR_015354.2	ILMN_357168	C17ORF72	NR_015354.2	NR_015354.2		92340	169259829	NR_015354.2	C17orf72		ILMN_3238314	0005290440	S	1943	GGGAGGGGGCAAGGGTCTTAGACGTCCTGTGATCCCAGTTACCAGGGACC				17q23.3b	Homo sapiens chromosome 17 open reading frame 72 (C17orf72), non-coding RNA. XM_001726842 XM_001726843					
Homo sapiens	RefSeq	XM_931870.1	ILMN_33702	LOC642946	XM_931870.1	XM_931870.1		642946	88943738	XM_931870.1	LOC642946	XP_936963.1	ILMN_1782178	0005080201	I	520	GCTGTCCTTGTCGGTGAGACCCTGGCTTTAGGGCAGACAGGACCACGTTT	1	-	211096907-211096956	1q32.3c	PREDICTED: Homo sapiens hypothetical protein LOC642945, transcript variant 2 (LOC642946), mRNA.					
Homo sapiens	RefSeq	NM_001093779.2	ILMN_365018	LOC730754	NM_001093779.2	NM_001093779.2		730754	194018446	NM_001093779.2	LOC730754	NP_001087248.2	ILMN_3241462	0004670170	S	203	CAAGAGGGCGGGAGAACTCACTGATGATGAGGTGGAACGTGTGATCACCG					Homo sapiens similar to ribosomal protein S18 (LOC730754), mRNA.					
Homo sapiens	RefSeq	NM_006901.1	ILMN_27441	MYO9A	NM_006901.1	NM_006901.1		4649	5902011	NM_006901.1	MYO9A	NP_008832.1	ILMN_2173919	0001690288	S	8059	CAGAAAGCCTGCTGGGGATGGTGCCAGCTGTGCCTTGGCTGTTGTATTTG	15	-	69905755-69905804	15q23b	Homo sapiens myosin IXA (MYO9A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC71859; FLJ13244; FLJ11061	MGC71859; FLJ13244; FLJ11061
Homo sapiens	RefSeq	XM_939302.1	ILMN_308090	PPM1H	NM_020700.1	NM_020700.1		57460	149944714	NM_020700.1	PPM1H	NP_065751.1	ILMN_1713846	0000450414	A	5877	TTTCTGGAGACCCAGGGAGGCCCATGGTGGAGATCATTTGTAAGGAATGG	12	-	63038036-63038085	12q14.1d-q14.2a	Homo sapiens protein phosphatase 1H (PP2C domain containing) (PPM1H), mRNA.			Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA1157; FLJ13253; ARHCL1	
Homo sapiens	RefSeq	NM_023921.1	ILMN_449	TAS2R10	NM_023921.1	NM_023921.1		50839	12965179	NM_023921.1	TAS2R10	NP_076410.1	ILMN_1811799	0005560128	S	768	ACTGCTGCTTATGTTTGGAATGACAACCACAGCCATCTATCCCTGGGGTC	12	-	10978051-10978100	12p13.2b	Homo sapiens taste receptor, type 2, member 10 (TAS2R10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 10761934] [evidence TAS]	MGC126813; T2R10; MGC126811; TRB2	MGC126813; T2R10; MGC126811; TRB2
Homo sapiens	RefSeq	NM_001007544.1	ILMN_20193	C1ORF186	NM_001007544.1	NM_001007544.1		440712	56090508	NM_001007544.1	C1orf186	NP_001007545.1	ILMN_1690209	0002710487	S	1384	AGGCTTGGCTGGGAAAACAGGCCAATGCCCCGGCAAGAAAGGTTGAGATC	1	-	204454963-204455012	1q32.1h	Homo sapiens chromosome 1 open reading frame 186 (C1orf186), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ16052	FLJ16052
Homo sapiens	RefSeq	NM_033646.1	ILMN_7524	CDH7	NM_033646.1	NM_033646.1		1005	16306486	NM_033646.1	CDH7	NP_387450.1	ILMN_1813352	0004880056	A	2279	AGATACGATGACGAGGGCGGGGGAGAGGAGGACACGGAAGCGTTTGACAT	18	+	61698706-61698755	18q22.1c	Homo sapiens cadherin 7, type 2 (CDH7), transcript variant a, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDH7L1	CDH7L1
Homo sapiens	RefSeq	NM_033646.1	ILMN_7524	CDH7	NM_033646.1	NM_033646.1		1005	16306486	NM_033646.1	CDH7	NP_387450.1	ILMN_1660113	0004280255	I	75	CTTTGCCTTCATGCCTCAGGAGCTCAACTGATCACGGCTTTCACGACAGG	18	+	61568542-61568591	18q22.1c	Homo sapiens cadherin 7, type 2 (CDH7), transcript variant a, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDH7L1	CDH7L1
Homo sapiens	RefSeq	XM_001722439.1	ILMN_347768	LOC100131039	XM_001722439.1	XM_001722439.1		100131039	169164394	XM_001722439.1	LOC100131039	XP_001722491.1	ILMN_3290446	0003390086	M	119	CTGACCATGGAACCAAGTCATGGCAGTGGGTAACCAGGATGGAACTGCGG				2q31.2b	PREDICTED: Homo sapiens hypothetical protein LOC100131039 (LOC100131039), mRNA.					
Homo sapiens	Unigene	Hs.538558	ILMN_103976	HS.538558	Hs.538558		Hs.538558		2739888	AA722181			ILMN_1858700	0002190114	S	403	GGCTTCTTGGCTTTCCTCTCTGACAAGTGACTGAAATGGGGGTAGGGTTG	10	-	27572758-27572807		zh20c06.s1 Soares_pineal_gland_N3HPG Homo sapiens cDNA clone IMAGE:412618 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015191.1	ILMN_17085	SIK2	NM_015191.1	NM_015191.1		23235	38569459	NM_015191.1	SIK2	NP_056006.1	ILMN_3239795	0002490128	S	5501	GGCTTAGTATCGCTCTTTTTCTGCGGGGCTACTCTGAAGTACTGACTTGC	11	+	111102665-111102714	11q23.1b	Homo sapiens salt-inducible kinase 2 (SIK2), mRNA.				DKFZp434K1115; QIK; LOH11CR1I; KIAA0781; SIK2	DKFZp434K1115; QIK; LOH11CR1I; KIAA0781; SIK2
Homo sapiens	RefSeq	NM_015191.1	ILMN_17085	SIK2	NM_015191.1	NM_015191.1		23235	38569459	NM_015191.1	SIK2	NP_056006.1	ILMN_1668714	0003780504	S	5358	CTGAGGAGACTGGTTCTGTTGGTCAGTCAGGTGTTTGCTCAGCCCTGTCT	11	+	111102522-111102571	11q23.1b	Homo sapiens salt-inducible kinase 2 (SIK2), mRNA.				DKFZp434K1115; QIK; LOH11CR1I; KIAA0781; SIK2	DKFZp434K1115; QIK; LOH11CR1I; KIAA0781; SIK2
Homo sapiens	RefSeq	NM_007139.2	ILMN_6536	ZNF92	NM_007139.2	NM_007139.2		168374	37537683	NM_007139.2	ZNF92	NP_009070.2	ILMN_2348259	0006220414	A	2691	CACATGTGAAAGCAAGTGATCTGTTGTTGCTGAATCAGAGATATGAGAGA	7	+	64503137-64503186	7q11.21d	Homo sapiens zinc finger protein 92 (ZNF92), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2023909] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2023909] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HTF12; HPF12; TF12	HPF12; HTF12; TF12
Homo sapiens	RefSeq	NM_007139.2	ILMN_6536	ZNF92	NM_007139.2	NM_007139.2		168374	37537683	NM_007139.2	ZNF92	NP_009070.2	ILMN_1665327	0002690370	A	1697	GGAGAGAAACCCTGCAAACATGAATGTGGCAGAGCCTTTAACAAATCCTC	7	+	64502143-64502192	7q11.21d	Homo sapiens zinc finger protein 92 (ZNF92), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2023909] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2023909] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HTF12; HPF12; TF12	HPF12; HTF12; TF12
Homo sapiens	RefSeq	XM_001724655.1	ILMN_339137	LOC100129500	XM_001724655.1	XM_001724655.1		100129500	169213919	XM_001724655.1	LOC100129500	XP_001724707.1	ILMN_3181397	0004830537	A	451	AGCGGCTGGCCGGCCAGGGAGCCCACAGTGGCGGCCCGCACGCGGCCCTG				19q13.32a	PREDICTED: Homo sapiens hypothetical protein LOC100129500, transcript variant 2 (LOC100129500), mRNA.					
Homo sapiens	RefSeq	NM_182626.1	ILMN_171162	C2ORF48	NM_182626.1	NM_182626.1		348738	32699061	NM_182626.1	C2orf48	NP_872432.1	ILMN_1720833	0001400156	S	1552	AGAAGACAGGCAAGCCGAGAGGAGGACGGGCAAACGACCTCAACAGACAC	2	+	10268957-10269006	2p25.1d	Homo sapiens chromosome 2 open reading frame 48 (C2orf48), mRNA.				FLJ25102	FLJ25102
Homo sapiens	Unigene	Hs.551330	ILMN_110592	HS.551330	Hs.551330		Hs.551330		10368506	BE855955			ILMN_1837492	0005360192	S	146	GATTAAACCTCTGGAGTCAGTGCTCAGGGACACAGGCAGGGAGCAGCAAC					7f85c09.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:3303760 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016611.2	ILMN_13651	KCNK4	NM_016611.2	NM_016611.2		50801	15718764	NM_016611.2	KCNK4	NP_057695.2	ILMN_1680212	0005810021	I	1635	TGGGTGTGGAATTGCTTTCCTCGGGCCACCGTGGGGGCACCTCTGGCCTC	11	+	63824086-63824135	11q13.1b	Homo sapiens potassium channel, subfamily K, member 4 (KCNK4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10767409] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [pmid 10767409] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	TRAAK; DKFZP566E164	TRAAK; DKFZP566E164
Homo sapiens	Unigene	Hs.548534	ILMN_109860	HS.548534	Hs.548534		Hs.548534		31154463	CD370373			ILMN_1830824	0001010382	S	408	CCTTTGATCTGAAACAATGAAAGCCCCTGAGTCACTGGTCCTTCCCGAGC	17	+	72765806-72765855		UI-H-FT1-bkb-p-07-0-UI.s1 NCI_CGAP_FT1 Homo sapiens cDNA clone UI-H-FT1-bkb-p-07-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_934933.1	ILMN_170212	LOC732165	XM_001134259.1	XM_001134259.1		732165	113412117	XM_001134259.1	LOC732165	XP_001134259.1	ILMN_1668861	0003390639	A	983	GCCAATCCCTTCTCCACTTACTATAATGGTTGGAACTAAATGTCACCAAG					PREDICTED: Homo sapiens similar to Triosephosphate isomerase (TIM) (Triose-phosphate isomerase), transcript variant 2 (LOC732165), mRNA.					
Homo sapiens	RefSeq	XM_001727033.1	ILMN_344028	LOC729659	XM_001727033.1	XM_001727033.1		729659	169171466	XM_001727033.1	LOC729659	XP_001727085.1	ILMN_3225620	0003360593	A	120	AAGCTTCATGAATACAGAGCTGGCTGCCTTTACAAAGAACCAGAAGGACC				7q22.1f	PREDICTED: Homo sapiens hypothetical LOC729659 (LOC729659), mRNA.					
Homo sapiens	RefSeq	NM_002807.2	ILMN_3914	PSMD1	NM_002807.2	NM_002807.2		5707	25777599	NM_002807.2	PSMD1	NP_002798.2	ILMN_1702837	0005090647	S	2880	ACCAGTGAAGACATTGAGGAGCTGGTGGAACCTGTGGCAGCACATGGCCC	2	+	231743557-231743606	2q37.1b	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (PSMD1), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [pmid 8816993] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42176] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Modulates the activity of an enzyme [goid 30234] [evidence IEA]	S1; MGC133041; P112; MGC133040	S1; MGC133041; P112; MGC133040
Homo sapiens	RefSeq	NM_001004694.1	ILMN_24185	OR2T29	NM_001004694.1	NM_001004694.1		343563	52317216	NM_001004694.1	OR2T29	NP_001004694.1	ILMN_1663840	0001260202	S	444	CCTGGGCTCAGTGGATGGCTTCATGCTCACTCCCATCACCATGAGCTTCC	1	-	248722281-248722330	1q44f	Homo sapiens olfactory receptor, family 2, subfamily T, member 29 (OR2T29), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_016024.1	ILMN_3692	RBMX2	NM_016024.1	NM_016024.1		51634	7706315	NM_016024.1	RBMX2	NP_057108.1	ILMN_1678203	0002650682	S	1677	TCCCCGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGACTTCC	X	+	129375211-129375260	Xq25h	Homo sapiens RNA binding motif protein, X-linked 2 (RBMX2), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	CGI-79	CGI-79
Homo sapiens	RefSeq	XM_001723748.1	ILMN_337187	LOC100133489	XM_001723748.1	XM_001723748.1		100133489	169218332	XM_001723748.1	LOC100133489	XP_001723800.1	ILMN_3237584	0000870367	S	164	TAGTGGAAAGCGGCCTCGTGAAGGGGAAGCCGAGGGTGCCGAGACCACAA					PREDICTED: Homo sapiens similar to hCG1983233 (LOC100133489), mRNA.					
Homo sapiens	RefSeq	NM_002751.5	ILMN_23755	MAPK11	NM_002751.5	NM_002751.5		5600	47519746	NM_002751.5	MAPK11	NP_002742.3	ILMN_1735361	0003780241	I	1906	CTCTCCTCGGTTCCTGATGCCTTGAGGGGTGTTTCAGACTGGCGGCTCCA	22	-	50702574-50702623	22q13.33b	Homo sapiens mitogen-activated protein kinase 11 (MAPK11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8846784] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9687510] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 8663524] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 8663524] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8846784] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9687510] [evidence EXP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 8663524] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254968] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 8339] [pmid 8663524] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p38-2; SAPK2B; SAPK2; PRKM11; P38BETA2; P38B; p38Beta	p38-2; SAPK2B; SAPK2; PRKM11; P38BETA2; P38B; p38Beta
Homo sapiens	RefSeq	NM_138993.2	ILMN_23755	MAPK11	NM_002751.5	NM_002751.5		5600	47519746	NM_002751.5	MAPK11	NP_002742.3	ILMN_1724715	0006060703	A	1215	TGGCCTGGTTTCCTCGAGAGGCACCTCCCACACTCCTATGGTCACAGACT	22	-	50703265-50703314	22q13.33b	Homo sapiens mitogen-activated protein kinase 11 (MAPK11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8846784] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9687510] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 8663524] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 8663524] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8846784] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9687510] [evidence EXP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 8663524] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17254968] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 8339] [pmid 8663524] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p38-2; SAPK2B; SAPK2; PRKM11; P38BETA2; P38B; p38Beta	p38-2; SAPK2B; SAPK2; PRKM11; P38BETA2; P38B; p38Beta
Homo sapiens	RefSeq	NM_022803.1	ILMN_12612	UCP3	NM_022803.1	NM_022803.1		7352	13259545	NM_022803.1	UCP3	NP_073714.1	ILMN_1733554	0000620372	A	923	GGTGAAGACCCGGTATATGAACTCACCTCCAGGCCAGTACTTCAGCCCCC	11	-	73392574-73392623	11q13.4b	Homo sapiens uncoupling protein 3 (mitochondrial, proton carrier) (UCP3), nuclear gene encoding mitochondrial protein, transcript variant short, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9180264] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 9196039] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10935638] [evidence TAS]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 9180264] [evidence TAS]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 9196039] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9196039] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of protons from mitochondrial intermembrane space into mitochondrial matrix, dissipating the proton gradient across the mitochondrial inner membrane established by the electron transport chain during the oxidative phosphorylation (proton leak). Proton leak uncouples the processes of electron transport/proton generation and ATP synthesis [goid 17077] [evidence IEA]	SLC25A9	SLC25A9
Homo sapiens	RefSeq	NM_022803.1	ILMN_12612	UCP3	NM_022803.1	NM_022803.1		7352	13259545	NM_022803.1	UCP3	NP_073714.1	ILMN_1755992	0005910239	I	1085	CGAATGTGGCTACCGTGGGTCAACCTGGGATGTAGCGGTGAAGAGTACAG	11	-	73392412-73392461	11q13.4b	Homo sapiens uncoupling protein 3 (mitochondrial, proton carrier) (UCP3), nuclear gene encoding mitochondrial protein, transcript variant short, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9180264] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 9196039] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10935638] [evidence TAS]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 9180264] [evidence TAS]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 9196039] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9196039] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of protons from mitochondrial intermembrane space into mitochondrial matrix, dissipating the proton gradient across the mitochondrial inner membrane established by the electron transport chain during the oxidative phosphorylation (proton leak). Proton leak uncouples the processes of electron transport/proton generation and ATP synthesis [goid 17077] [evidence IEA]	SLC25A9	SLC25A9
Homo sapiens	RefSeq	NM_000983.3	ILMN_167909	RPL22	NM_000983.3	NM_000983.3		6146	48255919	NM_000983.3	RPL22	NP_000974.1	ILMN_2079386	0007380689	S	1557	CTGCGAGTTGCATAGCTGGAAGTTCAATGCTCAGTCCTACCTTGGCTCCC	1	-	6245558-6245607	1p36.31b	Homo sapiens ribosomal protein L22 (RPL22), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 8135813] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8135813] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8135813] [evidence TAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	HBP15/L22; HBP15; EAP	HBP15/L22; HBP15; EAP
Homo sapiens	RefSeq	XR_001081.1	ILMN_31914	LOC554203	XR_001081.1	XR_001081.1		554203	89059857	XR_001081.1	LOC554203		ILMN_1704431	0002480132	A	1831	GTGGGAGTTTACCACCACTAGACCTGCACGGGAAGAATTGCTAAAGGGAG	X	+	73136962-73137011	Xq13.2b	PREDICTED: Homo sapiens hypothetical LOC554203 (LOC554203), misc RNA.					
Homo sapiens	RefSeq	NM_015327.1	ILMN_10815	SMG5	NM_015327.1	NM_015327.1		23381	24308040	NM_015327.1	SMG5	NP_056142.1	ILMN_2126239	0005090020	S	4444	CCTGCCTCTCTCCTCTAAAATAGCAAGTCTGGGAAATCCTGGGGTGAGTG	1	-	154485708-154485757	1q22d	Homo sapiens Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans) (SMG5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14636577] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14636577] [evidence IDA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 16488880] [evidence TAS]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 16488880] [evidence TAS]; Any process that modulates the frequency, rate or extent of removal of phosphate groups from a molecule [goid 35303] [pmid 14636577] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14636577] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12699629] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14636577] [evidence IPI]; Interacting selectively with the enzyme protein phosphatase 2A [goid 51721] [pmid 14636577] [evidence IDA]	LPTSRP1; RP11-54H19.7; FLJ34864; KIAA1089; EST1B; SMG-5; LPTS-RP1	LPTSRP1; RP11-54H19.7; FLJ34864; KIAA1089; EST1B; SMG-5; LPTS-RP1
Homo sapiens	RefSeq	NM_014071.2	ILMN_20599	NCOA6	NM_014071.2	NM_014071.2		23054	32307127	NM_014071.2	NCOA6	NP_054790.2	ILMN_1695797	0003360086	S	6666	GCAATGGGGAAAGCAGGACTGTTGAGCCCTTTTGGTGTTGCGAGTTGAAG	20	-	33302924-33302973	20q11.22b	Homo sapiens nuclear receptor coactivator 6 (NCOA6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11443112] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10567404] [evidence NAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 11443112] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence ISS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 11443112] [evidence NAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 11443112] [evidence NAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 11443112] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence ISS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [pmid 11443112] [evidence TAS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [pmid 11302752] [evidence IDA]; Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [pmid 11443112] [evidence NAS]; Any series of molecular signals generated as a consequence of a glucocorticoid binding to its receptor [goid 42921] [pmid 11443112] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 11443112] [evidence IDA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11443112] [evidence IPI]; Interacting selectively with an estrogen receptor [goid 30331] [pmid 11443112] [evidence TAS];  [goid 30374] [pmid 11443112] [evidence IPI]; Interacting selectively with a retinoid X receptor [goid 46965] [pmid 11443112] [evidence TAS]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 11443112] [evidence IDA]	TRBP; AIB3; HOXA7; ANTP; HOX1.1; ASC2; RAP250; KIAA0181; PRIP; NRC	TRBP; AIB3; HOXA7; ANTP; HOX1.1; ASC2; RAP250; KIAA0181; PRIP; NRC
Homo sapiens	RefSeq	NM_006573.3	ILMN_171368	TNFSF13B	NM_006573.3	NM_006573.3		10673	23510443	NM_006573.3	TNFSF13B	NP_006564.1	ILMN_2066858	0006840020	S	882	CTACGCCATGGGACATCTAATTCAGAGGAAGAAGGTCCATGTCTTTGGGG	13	+	107753823-107753872	13q33.3b	Homo sapiens tumor necrosis factor (ligand) superfamily, member 13b (TNFSF13B), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10908663] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of germinal center formation [goid 2636] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10908663] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10359578] [evidence TAS]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IEA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IEA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the B cell receptor to augment B cell activation [goid 31296] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45885] [evidence IEA]; The regulated release of immunoglobulins from a B cell or plasma cell, whose mechanism includes the use of alternate polyadenylylation signals to favor the biosynthesis of secreted forms of immunoglobulin over membrane-bound immunoglobulin [goid 48305] [evidence IEA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	TNFSF20; CD257; TALL1; delta BAFF; BAFF; ZTNF4; TALL-1; THANK; BLYS	TNFSF20; CD257; TALL1; delta BAFF; BAFF; ZTNF4; TALL-1; THANK; BLYS
Homo sapiens	RefSeq	NM_207117.2	ILMN_12593	C14ORF68	NM_207117.2	NM_207117.2		283600	46397376	NM_207117.2	C14orf68	NP_997000.2	ILMN_1803300	0003460594	S	1368	CCTCTGCCCCATTCCTAGACCCTCACCCCCACCACTGTTCCTGTGTCTTC	14	+	99866103-99866152	14q32.2b	Homo sapiens chromosome 14 open reading frame 68 (C14orf68), mRNA.				HDMCP; HMFN1655	HDMCP; HMFN1655
Homo sapiens	RefSeq	NM_000759.2	ILMN_20477	CSF3	NM_000759.2	NM_000759.2		1440	27437047	NM_000759.2	CSF3	NP_000750.1	ILMN_1697069	0002630288	A	1026	AAACAGCAGTGTTCCCCATCTGGGTCCTTGCACCCCTCACTCTGGCCTCA	17	+	35427100-35427149	17q21.1a	Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2420009] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 2420009] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 2420009] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15664994] [evidence NAS]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [pmid 15664994] [evidence NAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-6 receptor [goid 5138] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 15664994] [evidence NAS]; Interacting selectively with the granulocyte colony-stimulating factor receptor [goid 5130] [pmid 2420009] [evidence TAS]; Interacting selectively with any enzyme [goid 19899] [pmid 12393522] [evidence IPI]	MGC45931; G-CSF; GCSF	MGC45931; G-CSF; GCSF
Homo sapiens	RefSeq	NM_000759.2	ILMN_20477	CSF3	NM_000759.2	NM_000759.2		1440	27437047	NM_000759.2	CSF3	NP_000750.1	ILMN_2322768	0004150551	A	1105	TTGGCTGTGAGGCCCCTGGACAAGCAGAGGTGGCCAGAGCTGGGAGGCAT	17	+	35427179-35427228	17q21.1a	Homo sapiens colony stimulating factor 3 (granulocyte) (CSF3), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2420009] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 2420009] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 2420009] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15664994] [evidence NAS]; The process by which a myeloid precursor cell acquires the specialized features of a granulocyte. Granulocytes are a class of leukocytes characterized by the presence of granules in their cytoplasm. These cells are active in allergic immune reactions such as arthritic inflammation and rashes. This class includes basophils, eosinophils and neutrophils [goid 30851] [pmid 15664994] [evidence NAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-6 receptor [goid 5138] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 15664994] [evidence NAS]; Interacting selectively with the granulocyte colony-stimulating factor receptor [goid 5130] [pmid 2420009] [evidence TAS]; Interacting selectively with any enzyme [goid 19899] [pmid 12393522] [evidence IPI]	MGC45931; G-CSF; GCSF	MGC45931; G-CSF; GCSF
Homo sapiens	RefSeq	XM_930528.1	ILMN_181121	LOC646050	XR_017673.1	XR_017673.1		646050	113412803	XR_017673.1	LOC646050		ILMN_1714955	0004850376	S	337	CAGGCAAAATTGCAACATGCTTAGAATTGCGAAGTACAGCTTTACAGTCC	2	+	11365785-11365834	2p25.1b	PREDICTED: Homo sapiens hypothetical LOC646050 (LOC646050), mRNA.					
Homo sapiens	RefSeq	NM_199339.1	ILMN_5059	LOC374768	NM_199339.1	NM_199339.1		374768	40786405	NM_199339.1	LOC374768	NP_955371.1	ILMN_1793440	0006980634	S	1536	AAACAAATGGCTTGCAGTCTCCAGGGCACCACAGACCCCAGTGATGCACC	17	+	7268169-7268218	17p13.1d	Homo sapiens hypothetical protein LOC374768 (LOC374768), mRNA.					
Homo sapiens	RefSeq	NM_016210.2	ILMN_9603	C3ORF18	NM_016210.2	NM_016210.2		51161	31543080	NM_016210.2	C3orf18	NP_057294.1	ILMN_1728581	0003370372	S	2279	GGGTCCTGGCAAGCCATTGGGCAGAGACAGACCACAAGAGCAGGGCATTT	3	-	50595788-50595837	3p21.31b	Homo sapiens chromosome 3 open reading frame 18 (C3orf18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			G20	G20
Homo sapiens	RefSeq	XM_944338.1	ILMN_137559	MARLIN1	XM_944338.1	XM_944338.1		152789	88978893	XM_944338.1	MARLIN1	XP_949431.1	ILMN_1656170	0007200136	I	40	TGGAGGGGGTGGGACACATCACTACAGGGTTTCCTTCCATGAGGACTCTG				4p16.1f	PREDICTED: Homo sapiens multiple coiled-coil GABABR1-binding protein, transcript variant 6 (MARLIN1), mRNA.					
Homo sapiens	RefSeq	NM_153264.5	ILMN_356666	COL29A1	NM_153264.5	NM_153264.5		256076	183583552	NM_153264.5	COL29A1	NP_694996.5	ILMN_3258955	0003520452	M	8590	CCCACCTGTCAGGCTGCTATGACCCATAGTTAATGCTTTCTCTTCACCAG	3	+	130203400-130203449	3q22.1a	Homo sapiens collagen, type XXIX, alpha 1 (COL29A1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_002616.1	ILMN_164124	PER1	NM_002616.1	NM_002616.1		5187	4505712	NM_002616.1	PER1	NP_002607.1	ILMN_1653125	0006840743	S	4377	CTGACTCTTGAGGGTTGGGGCTGCACTTATTTATTGCGGGGAGACAGCTC	17	-	7984744-7984793	17p13.1c	Homo sapiens period homolog 1 (Drosophila) (PER1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The synchronization of a circadian rhythm to environmental time cues such as light [goid 9649] [pmid 9323128] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	RIGUI; PER; hPER; MGC88021	PER; MGC88021; RIGUI; hPER
Homo sapiens	RefSeq	XM_001725823.1	ILMN_352425	LOC728494	XM_001725823.1	XM_001725823.1		728494	169201898	XM_001725823.1	LOC728494	XP_001725875.1	ILMN_3229839	0000840452	A	76	GAAGGATTTGGGCTGAAGCCAGGGGAACAGAACCAGAAGAGGATTCCCTT				10p12.31b	PREDICTED: Homo sapiens hypothetical LOC728494 (LOC728494), mRNA.					
Homo sapiens	RefSeq	XM_929438.1	ILMN_46213	LOC646512	XM_929438.1	XM_929438.1		646512	89045140	XM_929438.1	LOC646512	XP_934531.1	ILMN_1671132	0003310129	S	1026	GGTGTGATCTTGCCTTTGCTCCATCTGCAAGACCACTCTTCCATAGAAGT	18	-	15306146-15306195		PREDICTED: Homo sapiens similar to ankyrin repeat domain 30A (LOC646512), mRNA.					
Homo sapiens	RefSeq	NM_032137.3	ILMN_11050	C3ORF20	NM_032137.3	NM_032137.3		84077	68163571	NM_032137.3	C3orf20	NP_115513.3	ILMN_1684188	0006100349	S	3195	TCCCCGGTCTCCCACCCTGTCCTCCAAGCTTCTATAATAAACCAGCGGGC	3	+	14743487-14743535:14744637-14744637	3p25.1a-p24.3e	Homo sapiens chromosome 3 open reading frame 20 (C3orf20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP434N1817	DKFZP434N1817
Homo sapiens	RefSeq	NM_014788.2	ILMN_164650	TRIM14	NM_014788.2	NM_014788.2		9830	15208662	NM_014788.2	TRIM14	NP_055603.2	ILMN_1713542	0004250056	I	1397	TCTACCTAGATCAGCGTGGCTGGTCCCCTTACTGCCTGCTTCTTAGGGCC	9	-	100849644-100849693	9q22.33b	Homo sapiens tripartite motif-containing 14 (TRIM14), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11331580] [evidence IDA]	The regionalization process by which embryonic segments are divided into compartments that will result in differences in cell differentiation [goid 7386] [pmid 11331580] [evidence IDA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11331580] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0129	KIAA0129
Homo sapiens	RefSeq	NM_001486.2	ILMN_165705	GCKR	NM_001486.2	NM_001486.2		2646	30795244	NM_001486.2	GCKR	NP_001477.1	ILMN_1815530	0006960059	S	1770	ACAGGTGATACCCATCGCCTTGCTGAGCCTCCTATTCCGGTGCTCGATCA	2	+	27598962-27598965:27599640-27599685	2p23.3a	Homo sapiens glucokinase (hexokinase 4) regulator (GCKR), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10601273] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14627435] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10601273] [evidence EXP]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IEA]; A cellular homeostatic process involved in the maintenance of an internal equilibrium of glucose within a cell or between a cell and its external environment [goid 1678] [evidence IEA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [pmid 8662230] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11522786] [evidence IPI]	GKRP	GKRP
Homo sapiens	RefSeq	XM_938635.1	ILMN_40032	LOC649563	XM_938635.1	XM_938635.1		649563	89065988	XM_938635.1	LOC649563	XP_943728.1	ILMN_1812659	0006250719	S	373	CAGTGTTCTCACCTTAGAAGACACGAGAAAACTCACACGGGACAGAGACC					PREDICTED: Homo sapiens similar to gonadotropin inducible ovarian transcription factor 2 (LOC649563), mRNA.					
Homo sapiens	Unigene	Hs.554507	ILMN_111989	HS.554507	Hs.554507		Hs.554507		76879778	AB074162			ILMN_1874689	0006370228	S	2054	GAATAGAAACCAGACAGCAATTCTTTAGTTCCAGCCACCATTCGCCCCAC	9	+	126462570-126462619		Homo sapiens primary neuroblastoma cDNA, clone:Nbla10527, full insert sequence					
Homo sapiens	RefSeq	NM_002961.2	ILMN_20183	S100A4	NM_019554.2	NM_019554.2		6275	115430249	NM_019554.2	S100A4	NP_062427.1	ILMN_1684306	0005290270	A	104	ATCCTGACTGCTGTCATGGCGTGCCCTCTGGAGAAGGCCCTGGATGTGAT	1	-	153517235-153517270:153517271-153517284	1q21.3c	Homo sapiens S100 calcium binding protein A4 (S100A4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [pmid 14679171] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8204608] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15479433] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14640694] [evidence IPI]	FSP1; MTS1; 18A2; PEL98; P9KA; CAPL; 42A	FSP1; MTS1; 18A2; PEL98; P9KA; CAPL; 42A
Homo sapiens	RefSeq	NM_002961.2	ILMN_20183	S100A4	NM_019554.2	NM_019554.2		6275	115430249	NM_019554.2	S100A4	NP_062427.1	ILMN_1688780	0003990458	I	2	TTCTTCCCCTCTCTACAACCCTCTCTCCTCAGCGCTTCTTCTTTCTTGGT	1	-	153518231-153518280	1q21.3c	Homo sapiens S100 calcium binding protein A4 (S100A4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [pmid 14679171] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8204608] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15479433] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14640694] [evidence IPI]	FSP1; MTS1; 18A2; PEL98; P9KA; CAPL; 42A	FSP1; MTS1; 18A2; PEL98; P9KA; CAPL; 42A
Homo sapiens	RefSeq	NM_031956.1	ILMN_9938	TTC29	NM_031956.2	NM_031956.2		83894	148612820	NM_031956.2	TTC29	NP_114162.2	ILMN_1694979	0002810228	S	1477	AGTCTGCAGATCTCACCAGCCTCAACTACCTGCTGTCATGGAAGGAGAGC	4	-	147944089-147944138	4q31.23a	Homo sapiens tetratricopeptide repeat domain 29 (TTC29), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	NYD-SP14; TBPP2A	NYD-SP14
Homo sapiens	Unigene	Hs.573575	ILMN_125756	HS.573575	Hs.573575		Hs.573575		62741150	AU310952			ILMN_1873492	0004050465	S	493	CCGCACCCATACACTTACGCGGCAATCCCCCTTCAAGACACACACAACCC	X	+	130029322-130029347		AU310952 human 4S neuroblastoma cDNA Homo sapiens cDNA clone Nbla-24676 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020702.1	ILMN_6372	KIAA1161	NM_020702.3	NM_020702.3		57462	153791945	NM_020702.3	KIAA1161	NP_065753.2	ILMN_1741971	0006580524	S	3771	AGTCTGGAGAAAAGTGGCATGCCAGAGCGGGTCGGTGGGAAACAGGGTGA	9	-	34369288-34369337	9p13.3c	Homo sapiens KIAA1161 (KIAA1161), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]		
Homo sapiens	RefSeq	XM_001720371.1	ILMN_341225	LOC100132628	XM_001720371.1	XM_001720371.1		100132628	169171000	XM_001720371.1	LOC100132628	XP_001720423.1	ILMN_3283203	0000360452	M	61	CCTGTATGTACTGCATCAGCAGGTTCTCTTCCCTTCGCTTTCTGCATGGT	7	-	149572817-149572866	7q36.1c	PREDICTED: Homo sapiens hypothetical LOC100132628 (LOC100132628), mRNA.					
Homo sapiens	RefSeq	XR_040042.1	ILMN_339929	FLJ34503	XR_040042.1	XR_040042.1		285759	169169812	XR_040042.1	FLJ34503		ILMN_3307149	0007100397	A	448	CCTGCCAGTGCCTTTGTTTATCCGAGGCGCCAAGATCCCACTGTGAAGTC				6q22.1a	PREDICTED: Homo sapiens misc_RNA (FLJ34503), miscRNA.					
Homo sapiens	RefSeq	NM_004571.3	ILMN_163668	PKNOX1	NM_004571.3	NM_004571.3		5316	37595549	NM_004571.3	PKNOX1	NP_004562.2	ILMN_1789449	0005420435	I	2729	CACGGGTTGGCTCCTACGTTTGCGTTTGTGGCTGGTCTCCTGGTGTCAGT	21	+	43324510-43324559	21q22.3c	Homo sapiens PBX/knotted 1 homeobox 1 (PKNOX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 9479508] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PREP1; pkonx1c	PREP1; pkonx1c
Homo sapiens	RefSeq	NM_197976.1	ILMN_163668	PKNOX1	NM_004571.3	NM_004571.3		5316	37595549	NM_004571.3	PKNOX1	NP_004562.2	ILMN_1745365	0002100537	A	4756	TGTCCAGAGGGGGTTCTGCCCCTTGTGAAGGCCCATTCCTGGCACTTAGA	21	+	43326537-43326586	21q22.3c	Homo sapiens PBX/knotted 1 homeobox 1 (PKNOX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 9479508] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PREP1; pkonx1c	PREP1; pkonx1c
Homo sapiens	RefSeq	NM_006861.4	ILMN_163689	RAB35	NM_006861.4	NM_006861.4		11021	38016920	NM_006861.4	RAB35	NP_006852.1	ILMN_1812571	0003390192	S	2738	GTGGGGACTCAGGGCTGGACCGACGTCCTAGTGGACCTGATGTGAAATTC	12	-	119017395-119017444	12q24.23c	Homo sapiens RAB35, member RAS oncogene family (RAB35), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16950109] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [pmid 16950109] [evidence IDA]; The portion of the plasma membrane surrounding a cell surface projection [goid 31253] [pmid 16950109] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; A direct link between the cytoplasms of sister cells that allows cells to communicate with one another. Germline intercellular bridges facilitate the passage of cytoplasmic components between cells during development. Intercellular bridges have also been found connecting somatic cells [goid 45171] [pmid 16950109] [evidence IDA]; A clathrin-coated, membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 45334] [pmid 16950109] [evidence IDA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 16950109] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 16950109] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [pmid 16950109] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 7811277] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with phosphatidylinositol-4,5-bisphosphate, a diphosphorylated derivative of phosphatidylinositol [goid 5546] [pmid 16950109] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	RAB1C; H-ray; RAY	RAB1C; H-ray; RAY
Homo sapiens	RefSeq	NM_030881.2	ILMN_28024	DDX17	NM_030881.3	NM_030881.3		10521	148613853	NM_030881.3	DDX17	NP_112020.1	ILMN_1774513	0005130692	I	307	CCTCTTGCTGTCATCTGCATTCGTGCTTCCCACCTGTTGTTGGCATGTCC	22	-	38884179-38884228	22q13.1b	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (DDX17), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8871553] [evidence TAS]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8871553] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8871553] [evidence TAS]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a RNA helix [goid 3724] [pmid 8871553] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of RNA; drives another reaction [goid 8186] [pmid 8871553] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	DKFZp761H2016; RH70; P72	DKFZp761H2016; RH70; P72
Homo sapiens	RefSeq	NM_001478.2	ILMN_13062	B4GALNT1	NM_001478.3	NM_001478.3		2583	84781815	NM_001478.3	B4GALNT1	NP_001469.1	ILMN_1805725	0001740086	S	2512	GGCTGGGGTGAGGGCTGGTGGTTGGTGAAAGCCATTCTTAGTTGTGTCTC	12	-	58019999-58020048	12q14.1a	Homo sapiens beta-1,4-N-acetyl-galactosaminyl transferase 1 (B4GALNT1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 1601877] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues [goid 1574] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 1601877] [evidence TAS]; The chemical reactions and pathways involving glycosphingolipids, any compound with residues of sphingoid and at least one monosaccharide [goid 6687] [pmid 1601877] [evidence TAS]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IEA]; Covalent attachment of a glycosyl residue to a lipid molecule [goid 30259] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + (N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide = UDP + N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide [goid 3947] [pmid 8702839] [evidence TAS]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]	GALGT; GALNACT	GALNACT
Homo sapiens	RefSeq	NM_004721.3	ILMN_26566	MAP3K13	NM_004721.3	NM_004721.3		9175	32130538	NM_004721.3	MAP3K13	NP_004712.1	ILMN_1673896	0004880133	S	3256	CCAGCATTTTGTCTGGGAAGAGAGACTACCCCATCTTTACCACCCCCTAG	3	+	185200327-185200376	3q27.2a	Homo sapiens mitogen-activated protein kinase kinase kinase 13 (MAP3K13), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9353328] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A protein serine/threonine kinase that phosphorylates IkappaB, thereby targeting this for proteasomal degradation and allowing the nuclear translocation of kB. Composed of alpha, beta and gamma subunits, the latter not having kinase activity but presumed to play a regulatory role [goid 8385] [pmid 12492477] [evidence IPI]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [pmid 11726277] [evidence IDA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 11726277] [evidence IPI]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 9353328] [evidence IDA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 9353328] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 12492477] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9353328] [evidence IDA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [pmid 11726277] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 9353328] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11163770] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC133196; LZK	MGC133196; LZK
Homo sapiens	RefSeq	XM_373378.2	ILMN_23036	LOC392559	XM_373378.2	XM_373378.2		392559	51477543	XM_373378.2	LOC392559	XP_373378.2	ILMN_1697979	0003370259	S	100	CGCTGTGTCGGAGACTGCAACAGTCAGCACACATTCCTGATTGATCAGGC	X	-	152317523-152317572		PREDICTED: Homo sapiens similar to paraneoplastic antigen MA3 (LOC392559), mRNA.					
Homo sapiens	RefSeq	XR_019241.2	ILMN_169982	LOC644101	XR_019241.2	XR_019241.2		644101	169168786	XR_019241.2	LOC644101		ILMN_3282503	0005960066	M	37	TGCGACCCGGAGCAGTTCGGAGGCGGTGAATAATATCTCATCAAGTCTGC				6q22.1d	PREDICTED: Homo sapiens misc_RNA (LOC644101), miscRNA.					
Homo sapiens	Unigene	Hs.436572	ILMN_91733	HS.436572	Hs.436572		Hs.436572		47357177	CN357243			ILMN_1820605	0001070390	S	483	ATCCAGGGATTAGGACATGTATCTCTCTGAGGGCCACTGTTCAGCTGACC	17	+	10556475-10556524		17000600107276 GRN_PREHEP Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NM_000144.3	ILMN_11911	FXN	NM_000144.3	NM_000144.3		2395	31742514	NM_000144.3	FXN	NP_000135.2	ILMN_1774826	0006760088	A	1836	GAGAGCCCTGGTCCTAGACATAGTTCAGCCACAAAGTAGTTGTCCCTTTG	9	+	70878346-70878395	9q21.11a	Homo sapiens frataxin (FXN), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9241270] [evidence TAS]	The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [pmid 9180083] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8841185] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 8841185] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 9180083] [evidence TAS]	Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [pmid 8841185] [evidence TAS]; Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [pmid 9326946] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9326946] [evidence TAS]	FA; X25; FRDA; FARR; MGC57199; CyaY	FA; X25; FRDA; FARR; MGC57199; CyaY
Homo sapiens	RefSeq	NM_018708.1	ILMN_2838	FEM1A	NM_018708.2	NM_018708.2		55527	105554405	NM_018708.2	FEM1A	NP_061178.1	ILMN_1719985	0005890538	S	3745	GTCCCTGTCCCTCCCAAAGCACAGAGCACAGAAATGAGGCCGTTTACATG	19	+	4746472-4746521	19p13.3d	Homo sapiens fem-1 homolog a (C. elegans) (FEM1A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process that modulates the frequency, rate or extent of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 51438] [evidence ISS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence ISS]	DKFZp762M136; EPRAP	DKFZp762M136; EPRAP
Homo sapiens	RefSeq	XM_937536.1	ILMN_40120	LOC648489	XM_937536.1	XM_937536.1		648489	88980377	XM_937536.1	LOC648489	XP_942629.1	ILMN_1730239	0006220156	S	224	CAAGGTGGAAGTCCATGATTCAGTCTCACCCTTACTTAGCAGCAGAAGCC					PREDICTED: Homo sapiens similar to CG9924-PC, isoform C (LOC648489), mRNA.					
Homo sapiens	RefSeq	XM_001719086.1	ILMN_350464	LOC100134700	XM_001719086.1	XM_001719086.1		100134700	169170377	XM_001719086.1	LOC100134700	XP_001719138.1	ILMN_3247748	0000020735	S	61	GAAGAGCTTGGCTGCAGAAACTTCGGGGTCTACAAACACCGGCGGGAGCT	7	-	55815104-55815153		PREDICTED: Homo sapiens hypothetical protein LOC100134700 (LOC100134700), mRNA.					
Homo sapiens	RefSeq	XM_929674.1	ILMN_138967	LOC644625	XM_929674.1	XM_929674.1		644625	88997745	XM_929674.1	LOC644625	XP_934767.1	ILMN_1663511	0004810369	S	181	AATTACCACAACGTTAATGACTTAAAAATACAAAATTTTAATATTGAGTT	6	+	146534065-146534114	6q24.3a	PREDICTED: Homo sapiens similar to FUN14 domain containing 2 (LOC644625), mRNA.					
Homo sapiens	RefSeq	XM_929789.1	ILMN_31893	LOC646829	XM_929789.1	XM_929789.1		646829	89047172	XM_929789.1	LOC646829	XP_934882.1	ILMN_1671985	0007550373	S	1	ATGTACAAAGAGACTAATGTTGCTTTCATACCTGCTAAGATAACATCTAT	18	-	29448671-29448720		PREDICTED: Homo sapiens hypothetical protein LOC646829 (LOC646829), mRNA.					
Homo sapiens	RefSeq	XM_940313.1	ILMN_35198	LOC651189	XM_940313.1	XM_940313.1		651189	88979666	XM_940313.1	LOC651189	XP_945406.1	ILMN_1809064	0004150228	S	1224	GCTCCTTTCACAGTTGCTGTCTGAGCAGGCCCACATTTGAGAAGCGGCTC					PREDICTED: Homo sapiens similar to Probable G-protein coupled receptor 125 precursor (LOC651189), mRNA.					
Homo sapiens	RefSeq	XM_001719624.1	ILMN_336426	LOC100132095	XM_001719624.1	XM_001719624.1		100132095	169208239	XM_001719624.1	LOC100132095	XP_001719676.1	ILMN_3236784	0003830064	S	554	CCCCAGGGTAAGGCAGAAATCACTGAATGTCAGGCAAAGGAACTGGCGTC	15	-	80523240-80523289	15q25.2a	PREDICTED: Homo sapiens hypothetical protein LOC100132095 (LOC100132095), mRNA.					
Homo sapiens	RefSeq	NM_138570.1	ILMN_29687	SLC38A10	NM_138570.2	NM_138570.2		124565	83921603	NM_138570.2	SLC38A10	NP_612637.1	ILMN_1759743	0006590333	S	2637	ATCTGCCTTACTCCCCTTTAAACACCTGCGGCATCGTCACATGGCTTGTG	17	-	79225046-79225095	17q25.3f	Homo sapiens solute carrier family 38, member 10 (SLC38A10), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]	Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC15523; FLJ35718; PP1744	FLJ35718
Homo sapiens	RefSeq	NM_024032.2	ILMN_17950	C17ORF53	NM_024032.2	NM_024032.2		78995	31543178	NM_024032.2	C17orf53	NP_076937.2	ILMN_1776490	0004570224	S	2596	TCCATGCCCAAGGTTCCCAGGTGCAGGACAGAGGTGTGGCCTATTGTACC	17	+	39595293-39595342	17q21.31c	Homo sapiens chromosome 17 open reading frame 53 (C17orf53), mRNA.				MGC3130; FLJ11594	MGC3130; FLJ11594
Homo sapiens	RefSeq	NR_024396.1	ILMN_371425	MGC23270	NR_024396.1	NR_024396.1		196872	212275902	NR_024396.1	MGC23270		ILMN_3245410	0001300253	S	2181	TTCCCTCCAGATGAGGTGCGCAACCAGTGGTGCTGCTGGACGTTTGAAAA	14	+	105289718-105289767		Homo sapiens hypothetical LOC196872 (MGC23270), non-coding RNA.					
Homo sapiens	RefSeq	XM_941292.1	ILMN_36271	LOC651997	XM_941292.1	XM_941292.1		651997	89067074	XM_941292.1	LOC651997	XP_946385.1	ILMN_1669775	0004780487	S	161	GGGCTGACATGGAGAAGGGTGAAATGAGGACTTTTGGTCTGGGGTCGTAG					PREDICTED: Homo sapiens similar to xenobiotic/medium-chain fatty acid:CoA ligase (LOC651997), mRNA.					
Homo sapiens	RefSeq	Hs.581464	ILMN_183772	LOC728516	XM_001132985.1	XM_001132985.1		728516	113414912	XM_001132985.1	LOC728516	XP_001132985.1	ILMN_1817193	0000070221	S	145	CGCGGCCTCCTTTATCCTCCTGGTTTGGGTGCAGTACCAGACAACAACTT				3p24.3a	PREDICTED: Homo sapiens hypothetical LOC728516 (LOC728516), mRNA.					
Homo sapiens	Unigene	Hs.556708	ILMN_112605	HS.556708	Hs.556708		Hs.556708		31583424	CD557356			ILMN_1817168	0000840221	S	721	ATGCTAGAGATCACAGAACCAGGCACAGGGGGCTCATGCCTGTAATCCAG	16	+	22942298-22942307:22942309-22942317:22942320-22942339:22942341-22942348:22942351-22942353		AGENCOURT_14413052 NIH_MGC_180 Homo sapiens cDNA clone IMAGE:30390120 5, mRNA sequence					
Homo sapiens	RefSeq	NM_194249.1	ILMN_7698	DND1	NM_194249.1	NM_194249.1		373863	34740338	NM_194249.1	DND1	NP_919225.1	ILMN_1780991	0002060678	S	1103	GTGACTCCATTCTTTCTCCACAGGCACCCTGAATGGGCATGCAGAGCCTG	5	+	43663821-43663870	5q31.3b	Homo sapiens dead end homolog 1 (zebrafish) (DND1), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	RBMS4; MGC34750	RBMS4; MGC34750
Homo sapiens	RefSeq	NM_001033081.1	ILMN_19418	MYCL1	NM_001033081.1	NM_001033081.1		4610	74315994	NM_001033081.1	MYCL1	NP_001028253.1	ILMN_1754541	0001340246	I	456	AAGCTGGTGGGGTTGGGGAGGAACGAGAGCCCGGCAGCCGACTGTGCCGA	1	-	40367182-40367231	1p34.2d	Homo sapiens v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian) (MYCL1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]	MYCL; LMYC	MYCL; LMYC
Homo sapiens	RefSeq	NM_173610.1	ILMN_6871	TMEM84	NM_173610.1	NM_173610.1		283673	27734706	NM_173610.1	TMEM84	NP_775881.1	ILMN_1665876	0001500215	S	2332	TAAGCCAACACCTCCCCACTTCCTCCTGACAACCCAGGCACAGCCACTGA	15	+	67175035-67175084		Homo sapiens transmembrane protein 84 (TMEM84), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ33768; MGC126645; MGC126643	FLJ33768; MGC126645; MGC126643
Homo sapiens	Unigene	Hs.195372	ILMN_81331	HS.195372	Hs.195372		Hs.195372		4736911	AI652932			ILMN_1883901	0001980037	S	473	TCAGGAAACCGCTGTGTTGAGAACGCATTCCTGGACAACAGAACTTACAT					wb40h11.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2308197 3, mRNA sequence					
Homo sapiens	RefSeq	NM_053276.2	ILMN_584	VIT	NM_053276.2	NM_053276.2		5212	21359973	NM_053276.2	VIT	NP_444506.2	ILMN_1709434	0000380241	S	2186	CACTCACCCCGCCAGAGACCACTCCTTCTTTGTGGACGAGTTTGACAACC	2	+	36894891-36894940	2p22.2b	Homo sapiens vitrin (VIT), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC70561; DKFZp313L1517; MGC149746	MGC70561; DKFZp313L1517; MGC149746
Homo sapiens	RefSeq	NM_053276.2	ILMN_584	VIT	NM_053276.2	NM_053276.2		5212	21359973	NM_053276.2	VIT	NP_444506.2	ILMN_2111255	0001430521	S	2307	CAGAGCAGGCAGAGCACCAGCAAGTGCTGCTTTACTAACTGACGTGTTGG	2	+	36895012-36895061	2p22.2b	Homo sapiens vitrin (VIT), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC70561; DKFZp313L1517; MGC149746	MGC70561; DKFZp313L1517; MGC149746
Homo sapiens	RefSeq	NM_005681.2	ILMN_8114	TAF1A	NM_005681.2	NM_005681.2		9015	21536363	NM_005681.2	TAF1A	NP_005672.1	ILMN_1805158	0006760685	A	1162	CACCGTAAACTGGGGTTGGAGGTATTATTTGGAGTCTTAGATTTTGCCGG	1	-	222736577-222736626	1q41e	Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa (TAF1A), transcript variant 1, mRNA.	A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11250901] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase I (Pol I), originating at a Pol I-specific promoter [goid 6360] [pmid 7801123] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7801123] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase I transcription [goid 3701] [pmid 7801123] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 7801123] [evidence TAS]	TAFI48; SL1; RAFI48; MGC:17061	TAFI48; SL1; RAFI48; MGC:17061
Homo sapiens	RefSeq	XR_015295.2	ILMN_181654	LOC728368	XR_015295.2	XR_015295.2		728368	169202179	XR_015295.2	LOC728368		ILMN_3225941	0000460170	A	616	TTTGGGTTCCGTGTTTTCCTTGTTCCCTTACATGCCTAGCTGGATTGCAG	11	-	57241913-57241962	11q12.1b	PREDICTED: Homo sapiens misc_RNA (LOC728368), miscRNA.					
Homo sapiens	RefSeq	NM_007313.2	ILMN_4033	ABL1	NM_005157.3	NM_005157.3		25	62362413	NM_005157.3	ABL1	NP_005148.2	ILMN_1713732	0004180088	A	5257	CCTGTGGTGGCTCCCCCTCTGCTTCTCGGGGTCCAGTGCATTTTGTTTCT	9	+	132752752-132752801	9q34.12a	Homo sapiens c-abl oncogene 1, receptor tyrosine kinase (ABL1), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8242749] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 12944467] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A cell cycle process that regulates transcription such that the target genes are transcribed during the S phase of the mitotic cell cycle [goid 115] [pmid 8242749] [evidence TAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 10391249] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8242749] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 8242749] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 10391249] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [pmid 9144171] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered [goid 51353] [pmid 12893824] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9144171] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8242749] [evidence NAS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9144171] [evidence IDA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11971963] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 9144171] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	JTK7; ABL; p150; bcr/abl; v-abl; c-ABL	JTK7; ABL; p150; bcr/abl; v-abl; c-ABL
Homo sapiens	RefSeq	NM_005157.3	ILMN_4033	ABL1	NM_005157.3	NM_005157.3		25	62362413	NM_005157.3	ABL1	NP_005148.2	ILMN_2268241	0004880170	I	12	GATCTGCCTGAAGCTGGTGGGCTGCAAATCCAAGAAGGGGCTGTCCTCGT	9	+	132700663-132700712	9q34.12a	Homo sapiens c-abl oncogene 1, receptor tyrosine kinase (ABL1), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8242749] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 12944467] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A cell cycle process that regulates transcription such that the target genes are transcribed during the S phase of the mitotic cell cycle [goid 115] [pmid 8242749] [evidence TAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 10391249] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8242749] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 8242749] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 10391249] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [pmid 9144171] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered [goid 51353] [pmid 12893824] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 9144171] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8242749] [evidence NAS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9144171] [evidence IDA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11971963] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 9144171] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	JTK7; ABL; p150; bcr/abl; v-abl; c-ABL	JTK7; ABL; p150; bcr/abl; v-abl; c-ABL
Homo sapiens	RefSeq	NM_003435.3	ILMN_4618	ZNF134	NM_003435.3	NM_003435.3		7693	148539939	NM_003435.3	ZNF134	NP_003426.3	ILMN_3307724	0003390376	S	1953	GCTCTGCCAAACTGAAGACAGCCTTTGTGCGGTGCCTCCAACTTTGCCTC	19	+	58133341-58133390	19q13.43b	Homo sapiens zinc finger protein 134 (ZNF134), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7557990] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7557990] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC141970; pHZ-15; MGC138499	MGC141970; pHZ-15; MGC138499
Homo sapiens	Unigene	Hs.566479	ILMN_118797	HS.566479	Hs.566479		Hs.566479		27781651	CB043840			ILMN_1891247	0006130112	S	55	GCACCAGGAATTGGGGGCTGCTATCACCAAGAAACTAGAATGTGCAGCAT	6	+	125690991-125691040		NISC_gc01a06.x1 NCI_CGAP_Co17 Homo sapiens cDNA clone IMAGE:3217426 3, mRNA sequence					
Homo sapiens	Unigene	Hs.570966	ILMN_123147	HS.570966	Hs.570966		Hs.570966		13132325	BG325888			ILMN_1853093	0003310162	S	501	ATGTATGGCTGTGTCTTCACGGGGGCGTTCCTGGAGTGGGTGAACCGGGA	5	+	192818-192867		602424629F1 NIH_MGC_14 Homo sapiens cDNA clone IMAGE:4562766 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002947.3	ILMN_29134	RPA3	NM_002947.3	NM_002947.3		6119	52851430	NM_002947.3	RPA3	NP_002938.1	ILMN_1716895	0004150458	S	1360	TCTCTGGAATTGTGGAAGTGGTTGGAAGAGTAACCGCCAAGGCCACCATC	7	-	7680227-7680276	7p21.3e	Homo sapiens replication protein A3, 14kDa (RPA3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9826763] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11080452] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; A conserved heterotrimeric complex that binds nonspecifically to single-stranded DNA and is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. In all eukaryotic organisms examined the complex is composed of subunits of approximately 70, 30, and 14 kDa [goid 5662] [pmid 8454588] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8454588] [evidence TAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]	Interacting selectively with single-stranded DNA [goid 3697] [pmid 8454588] [evidence TAS]	REPA3	REPA3
Homo sapiens	RefSeq	NM_001003398.1	ILMN_19251	BICD1	NM_001003398.1	NM_001003398.1		636	51093829	NM_001003398.1	BICD1	NP_001003398.1	ILMN_2362034	0006220767	A	2977	GAAAACGTGTCTCAGATGGCTGGCTTTACCTCGATAGCATAAGAGAGACC	12	+	32381836-32381885	12p11.21a	Homo sapiens bicaudal D homolog 1 (Drosophila) (BICD1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9367685] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 9367685] [evidence TAS]; Any process by which mRNA is transported to, or maintained in, a specific location within the cell [goid 8298] [pmid 9367685] [evidence NAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9367685] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9367685] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	BICD	BICD
Homo sapiens	RefSeq	NM_016816.2	ILMN_168616	OAS1	NM_016816.2	NM_016816.2		4938	74229012	NM_016816.2	OAS1	NP_058132.2	ILMN_1672606	0001070767	I	1192	TCAGAAATATGGTTACATTGGAACACATGAGTACCCTCATTTCTCTCATA	12	+	111841624-111841673	12q24.13b	Homo sapiens 2',5'-oligoadenylate synthetase 1, 40/46kDa (OAS1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 3754863] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 2440675] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	OIAS; IFI-4; OIASI	OIAS; OIASI; IFI-4
Homo sapiens	RefSeq	XM_944328.1	ILMN_137512	MARLIN1	XM_944328.1	XM_944328.1		152789	88978880	XM_944328.1	MARLIN1	XP_949421.1	ILMN_1711949	0006650110	I	100	AGTAAGGCTTTTAGTTAGAAGCTGACACCGGGGGCCAACCTCAGCCCCTG				4p16.1f	PREDICTED: Homo sapiens multiple coiled-coil GABABR1-binding protein, transcript variant 3 (MARLIN1), mRNA.					
Homo sapiens	RefSeq	XM_944328.1	ILMN_137512	MARLIN1	XM_944328.1	XM_944328.1		152789	88978880	XM_944328.1	MARLIN1	XP_949421.1	ILMN_1714162	0003180128	A	1011	TGCGCTTCTGCCAGCTGACCCGGGAACTCGGGAGCAGCTACAAGCTGATC				4p16.1f	PREDICTED: Homo sapiens multiple coiled-coil GABABR1-binding protein, transcript variant 3 (MARLIN1), mRNA.					
Homo sapiens	Unigene	Hs.539482	ILMN_104548	HS.539482	Hs.539482		Hs.539482		3134746	AA962582			ILMN_1909683	0003890438	S	195	AGGATGGGTGTTCCTCCATCTGGGTCCGTGGGTGGCTTTCCTCCATTTGG					or34g04.s1 NCI_CGAP_GC3 Homo sapiens cDNA clone IMAGE:1597782 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004175.3	ILMN_163179	SNRPD3	NM_004175.3	NM_004175.3		6634	34328935	NM_004175.3	SNRPD3	NP_004166.1	ILMN_1794599	0004290544	S	1129	TGGCCAGTTGCAGGTTAAGCCCCAGAAAAGTTCACCTTGGAGAAGCTCCG	22	+	23298253-23298302	22q11.23b	Homo sapiens small nuclear ribonucleoprotein D3 polypeptide 18kDa (SNRPD3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 7527560] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 1701240] [evidence TAS]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 1701240] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11748230] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12065586] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]	SMD3	SMD3
Homo sapiens	RefSeq	XM_001717156.1	ILMN_337923	LOC100132742	XM_001717156.1	XM_001717156.1		100132742	169161113	XM_001717156.1	LOC100132742	XP_001717208.1	ILMN_3202734	0006580017	A	48	GACCCGGAGAACCCCACGGAATCATGCAAATCAAGAGGTTCCAATCTTCG	1	+	109336445-109336494	1p13.3b	PREDICTED: Homo sapiens hypothetical protein LOC100132742, transcript variant 1 (LOC100132742), mRNA.					
Homo sapiens	RefSeq	XM_933943.1	ILMN_44459	LOC646796	XM_933943.1	XM_933943.1		646796	88943583	XM_933943.1	LOC646796	XP_939036.1	ILMN_1699136	0007510349	S	25	TCTCTCATTGTTTCTCACTGTTGCTGGTTAATCGCTTCAGGAGCTAAGGG	1	-	168767685-168767734		PREDICTED: Homo sapiens hypothetical protein LOC646796 (LOC646796), mRNA.					
Homo sapiens	RefSeq	NM_198312.1	ILMN_7891	MAP3K7IP3	NM_152787.3	NM_152787.3		257397	98991766	NM_152787.3	MAP3K7IP3	NP_690000.2	ILMN_1748272	0001340601	A	3653	CTGCGCTTTGCCAGTAGCACAGTGAATGTATGCCAAATGCAAGTCCATTC	X	-	30848643-30848692	Xp21.2a	Homo sapiens mitogen-activated protein kinase kinase kinase 7 interacting protein 3 (MAP3K7IP3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17158449] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NAP1; TAB3; MGC45404	NAP1; MGC45404
Homo sapiens	RefSeq	NM_152787.2	ILMN_7891	MAP3K7IP3	NM_152787.3	NM_152787.3		257397	98991766	NM_152787.3	MAP3K7IP3	NP_690000.2	ILMN_1671351	0005870438	I	2498	TTTATGACAACATAGAACCTGGCCCAGTTGTACCACCCAAGCCATCTAAA	X	-	30861086-30861135	Xp21.2a	Homo sapiens mitogen-activated protein kinase kinase kinase 7 interacting protein 3 (MAP3K7IP3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17158449] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NAP1; TAB3; MGC45404	NAP1; MGC45404
Homo sapiens	RefSeq	NM_017647.2	ILMN_23328	FTSJ3	NM_017647.2	NM_017647.2		117246	17017990	NM_017647.2	FTSJ3	NP_060117.2	ILMN_1811692	0004210600	S	2631	TCCCAGGAGAGCATGGGGACTAGGAGGAAGGGTGTGGCATGGCTCAGTCT	17	-	59250828-59250877	17q23.3b	Homo sapiens FtsJ homolog 3 (E. coli) (FTSJ3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ20062; EPCS3	FLJ20062; EPCS3
Homo sapiens	RefSeq	XR_038953.1	ILMN_336939	LOC643358	XR_038953.1	XR_038953.1		643358	169210295	XR_038953.1	LOC643358		ILMN_3201480	0005260521	A	344	CTATAAGGTGGATGAGAATGGCAAAATTAGTCGCCTTCGTCGAGAGTGCC				16q21b	PREDICTED: Homo sapiens misc_RNA (LOC643358), miscRNA.					
Homo sapiens	RefSeq	NM_016631.2	ILMN_16844	C21ORF66	NM_058191.3	NM_058191.3		94104	125661050	NM_058191.3	C21orf66	NP_478071.1	ILMN_1682896	0002490044	A	1418	CGACAGCAGCATGAGAAACATCTGCAAAGCCGAGTGGACTCTACCAGGGC	21	-	33053367-33053416	21q22.11b	Homo sapiens chromosome 21 open reading frame 66 (C21orf66), transcript variant 4, mRNA.				FLJ90561; GCFC; BM-020	FLJ90561; BM-020; GCFC
Homo sapiens	RefSeq	XM_936569.1	ILMN_173220	LOC730510	XM_001126144.1	XM_001126144.1		730510	113423592	XM_001126144.1	LOC730510	XP_001126144.1	ILMN_1799189	0002060754	S	2286	CCCAGATCACAGACAATCCAAATATTAGAACTAGGGGGCTGGGCAGAGAA					PREDICTED: Homo sapiens similar to FRG1 protein (FSHD region gene 1 protein) (LOC730510), mRNA.					
Homo sapiens	RefSeq	XR_037340.1	ILMN_336997	LOC100128867	XR_037340.1	XR_037340.1		100128867	169172342	XR_037340.1	LOC100128867		ILMN_3178826	0005130279	A	542	AATGACCAAAGAAAACGATGAGAAAAAATGCAAAATCTGTGCCAGGTCAT				7p11.2b-p11.2a	PREDICTED: Homo sapiens misc_RNA (LOC100128867), miscRNA.					
Homo sapiens	RefSeq	XM_001130329.1	ILMN_167710	LOC729461	XM_001130329.1	XM_001130329.1		729461	113429365	XM_001130329.1	LOC729461	XP_001130329.1	ILMN_3235457	0006590468	S	1362	TCGTGGACGCTGTACACGACATCGCTAATGAGGACTCCGTATACGACATC	22	-	18970032-18970081	22q11.21d	PREDICTED: Homo sapiens hypothetical LOC729461 (LOC729461), mRNA.					
Homo sapiens	RefSeq	NM_014734.2	ILMN_2972	KIAA0247	NM_014734.2	NM_014734.2		9766	41281456	NM_014734.2	KIAA0247	NP_055549.1	ILMN_2226917	0003170093	S	5049	AGTTGCCAAGCAAGGAGGAGAGATGTACGTGGGCTGTGTGGCAGTCCCCA	14	+	69251273-69251322	14q24.1e	Homo sapiens KIAA0247 (KIAA0247), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_015995.2	ILMN_16226	KLF13	NM_015995.2	NM_015995.2		51621	37693994	NM_015995.2	KLF13	NP_057079.2	ILMN_1679929	0002320114	S	6342	TTGCTTGTGTGCATGTGTTGGGTGCATGCTTCCGGGTCTCAGCTGCCCCA	15	+	29456936-29456985	15q13.3a	Homo sapiens Kruppel-like factor 13 (KLF13), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10023774] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17513757] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NSLP1; FKLF2; RFLAT-1; BTEB3; RFLAT1	NSLP1; FKLF2; RFLAT-1; BTEB3; RFLAT1
Homo sapiens	Unigene	Hs.562889	ILMN_115890	HS.562889	Hs.562889		Hs.562889		31449485	CD517767			ILMN_1857662	0002120477	S	531	AGTTGTGGGGAGAACTGCTGGGCCAAGAGACAGCTCCGAGTTCTGTGTAG	2	-	172999757-172999806		AGENCOURT_14371938 NIH_MGC_181 Homo sapiens cDNA clone IMAGE:30395065 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001003962.1	ILMN_6617	CAPNS1	NM_001003962.1	NM_001003962.1		826	51599150	NM_001003962.1	CAPNS1	NP_001003962.1	ILMN_1655418	0005290500	A	1237	TCCCCTGTACCTGTGCCAAGCCTAGCACTTGTGATGCCTCCATGCCCCGA	19	+	36641017-36641066	19q13.12b	Homo sapiens calpain, small subunit 1 (CAPNS1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8702541] [evidence TAS]	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [pmid 8702541] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10639123] [evidence IPI]	CANP; CALPAIN4; CDPS; 30K; CANPS; CAPN4	CANP; CALPAIN4; CDPS; 30K; CANPS; CAPN4
Homo sapiens	RefSeq	NM_001024215.1	ILMN_28643	FBLIM1	NM_001024216.1	NM_001024216.1		54751	66932987	NM_001024216.1	FBLIM1	NP_001019387.1	ILMN_1691249	0007510768	A	528	TTCACGTGTGTGACCTGCGCCCGGTGCATTGGGGATGAGAGCTTTGCCCT	1	+	15973787-15973836	1p36.21a	Homo sapiens filamin binding LIM protein 1 (FBLIM1), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434G171; CAL; RP11-169K16.5; FBLP1; FBLP-1	DKFZp434G171; CAL; RP11-169K16.5; FBLP1; FBLP-1
Homo sapiens	RefSeq	NM_005618.2	ILMN_1802	DLL1	NM_005618.3	NM_005618.3		28514	110735442	NM_005618.3	DLL1	NP_005609.3	ILMN_1743373	0004050687	S	2838	GCACTGCCTTCCGTGACGTCGCCGTTGCACTATGGACAGTTGCTCTTAAG	6	-	170591716-170591765	6q27f	Homo sapiens delta-like 1 (Drosophila) (DLL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11823422] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10079256] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [pmid 11581320] [evidence NAS]; The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [pmid 10079256] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The regionalization process by which embryonic segments are divided into compartments that will result in differences in cell differentiation [goid 7386] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 11581320] [evidence NAS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [pmid 11912004] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of auditory hair cell differentiation [goid 45608] [evidence IEA]; The process whose specific outcome is the progression of the inner ear over time, from its formation to the mature structure [goid 48839] [evidence IEA]	Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [pmid 11823422] [evidence IPI]; Interacting selectively with the Notch (N) protein, a surface receptor [goid 5112] [pmid 10079256] [evidence IPI]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DELTA1; Delta	DELTA1
Homo sapiens	RefSeq	NM_172109.1	ILMN_20672	KCNQ2	NM_172109.1	NM_172109.1		3785	26051267	NM_172109.1	KCNQ2	NP_742107.1	ILMN_1666776	0001510075	I	1298	ACCGCCGCCGGGCACCTGCCACCAAGCAACTGTTTCATTTTTTATTTTCC	20	-	62065109-62065158	20q13.33d-q13.33e	Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 2 (KCNQ2), transcript variant 5, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 9677360] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 9677360] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9425895] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9425895] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [pmid 9677360] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	KVEBN1; KV7.2; ENB1; BFNC; EBN; KCNA11; HNSPC; EBN1	KVEBN1; KV7.2; ENB1; BFNC; EBN; KCNA11; HNSPC; EBN1
Homo sapiens	RefSeq	NM_005978.3	ILMN_4973	S100A2	NM_005978.3	NM_005978.3		6273	45269153	NM_005978.3	S100A2	NP_005969.1	ILMN_1725852	0007550220	S	768	CTCAGCTGGAGTGCTGGGAGATGAGGGCCTCCTGGATCCTGCTCCCTTCT	1	-	153533729-153533778	1q21.3c	Homo sapiens S100 calcium binding protein A2 (S100A2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [pmid 15313892] [evidence IMP]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9481475] [evidence NAS]	S100L; CAN19; MGC111539	S100L; CAN19; MGC111539
Homo sapiens	Unigene	Hs.550042	ILMN_110139	HS.550042	Hs.550042		Hs.550042		21249875	BQ446763			ILMN_1828140	0001940372	S	415	CCAGGACTGAGGGCTTGAGAGAGTCCTTGGCAAACCAGGGCAGCTGGTCA	6	+	20208294-20208343		UI-H-EU1-bac-f-07-0-UI.s1 NCI_CGAP_Ct1 Homo sapiens cDNA clone UI-H-EU1-bac-f-07-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.60257	ILMN_73229	HS.60257	Hs.60257		Hs.60257		10435651	AK023660			ILMN_1880983	0004540161	S	1620	CCAGCCCACCCTAGGAGTGTTTGGATTTGATCATGGATGTAGCATACACC	16	-	79189672-79189721		Homo sapiens cDNA FLJ13598 fis, clone PLACE1009921					
Homo sapiens	RefSeq	NM_170754.2	ILMN_20668	TENC1	NM_170754.2	NM_170754.2		23371	38787956	NM_170754.2	TENC1	NP_736610.2	ILMN_2247084	0002340519	I	124	CAGCCGAACACCATGAAGTCCAGCGGCCCTGTGGAGAGGCTGCTCAGAGC	12	+	51730225-51730236:51730237-51730274	12q13.13e	Homo sapiens tensin like C1 domain containing phosphatase (tensin 2) (TENC1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 16951145] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 16951145] [evidence IMP]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17190795] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16951145] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C1TEN; FLJ16320; TNS2; DKFZp686D13244; C1-TEN; KIAA1075	C1TEN; FLJ16320; TNS2; DKFZp686D13244; C1-TEN; KIAA1075
Homo sapiens	RefSeq	XM_930155.1	ILMN_34542	LOC647134	XM_930155.1	XM_930155.1		647134	89040280	XM_930155.1	LOC647134	XP_935248.1	ILMN_1696705	0005690767	S	33	TGCTATTATAAAAGGTGATTTATGTGCCCAGTGTGAGGTGCAGCTGGTGG	16	+	31984765-31984788:31984877-31984902	16p11.2b	PREDICTED: Homo sapiens similar to Ig heavy chain V-III region VH26 precursor (LOC647134), mRNA.					
Homo sapiens	RefSeq	XM_944553.1	ILMN_36088	KIAA1345	XM_944553.1	XM_944553.1		57545	88979474	XM_944553.1	KIAA1345	XP_949646.1	ILMN_1785036	0004890543	A	366	GGAGCATCCCGTGCAGGGTAAATCTTTTCAAGCCACCAACTGCTGTCCCC				4p15.33a	PREDICTED: Homo sapiens KIAA1345 protein, transcript variant 8 (KIAA1345), mRNA.					
Homo sapiens	RefSeq	XM_001133879.2	ILMN_177615	LOC729199	XM_001133879.2	XM_001133879.2		729199	169162083	XM_001133879.2	LOC729199	XP_001133879.1	ILMN_3224972	0004200286	A	1999	CTTCTAGGAGGCATTAAGTCATGAACGGGGCGAGGGGGTTTGCCATCATG				1q44a	PREDICTED: Homo sapiens hypothetical LOC729199 (LOC729199), mRNA.					
Homo sapiens	RefSeq	XM_001133879.2	ILMN_177615	LOC729199	XM_001133879.2	XM_001133879.2		729199	169162083	XM_001133879.2	LOC729199	XP_001133879.1	ILMN_3301556	0007650279	M	1669	TCCAGGATCCCCCACGTAGAGGGCACCGCTGTTTGCGAGAAAGGCGACGA				1q44a	PREDICTED: Homo sapiens hypothetical LOC729199 (LOC729199), mRNA.					
Homo sapiens	RefSeq	NM_145696.1	ILMN_8603	BRF1	NM_145696.1	NM_145696.1		2972	22035559	NM_145696.1	BRF1	NP_663734.1	ILMN_1736836	0003520678	I	454	CTGCCTCTGTGGCTCTGCCTGTGGATCGCAGTCGCAGGCTCGCTCCTTGT	14	-	104785310-104785359	14q32.33c	Homo sapiens BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) (BRF1), transcript variant 2, mRNA.	A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIB contains the TATA-binding protein (TBP) and two Pol III-specific proteins, B'' and BRF [goid 126] [pmid 20380946] [evidence NAS]; A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIB contains the TATA-binding protein (TBP) and two Pol III-specific proteins, B'' and BRF [goid 126] [pmid 8943358] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA];  [goid 6384] [pmid 7624363] [evidence TAS]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [pmid 7624363] [evidence TAS]; The synthesis of transfer RNA (tRNA) from a DNA template [goid 9304] [pmid 8943358] [evidence TAS]; Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 20380946] [evidence NAS]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 8943358] [evidence TAS]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7624363] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	FLJ43034; TAF3C; TAFIII90; MGC105048; BRF; hBRF; TAF3B2; GTF3B; FLJ42674; TFIIIB90; TF3B90	FLJ43034; TAF3C; TAFIII90; MGC105048; BRF; hBRF; TAF3B2; GTF3B; FLJ42674; TFIIIB90; TF3B90
Homo sapiens	RefSeq	XM_942191.1	ILMN_46244	LOC644686	XM_942191.2	XM_942191.2		644686	113413715	XM_942191.2	LOC644686	XP_947284.1	ILMN_1765373	0002450672	S	1228	CTCCCAGTGCCATCCCTTCATCCACCCAATGCCTTCCCTCTGAAGATCAG					PREDICTED: Homo sapiens hypothetical LOC644686 (LOC644686), mRNA.					
Homo sapiens	RefSeq	NM_004454.1	ILMN_12676	ETV5	NM_004454.1	NM_004454.1		2119	4758315	NM_004454.1	ETV5	NP_004445.1	ILMN_1739222	0000770746	I	3817	GGGCATAGGACAGCGGCATCACGGTTGCATTCCCATTGGACTCATGCACC	3	-	187247011-187247060	3q27.2b	Homo sapiens ets variant gene 5 (ets-related molecule) (ETV5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8152800] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	ERM	ERM
Homo sapiens	RefSeq	NM_004454.1	ILMN_12676	ETV5	NM_004454.1	NM_004454.1		2119	4758315	NM_004454.1	ETV5	NP_004445.1	ILMN_1723260	0001450519	A	3398	TATGACCAACAGCACATTTGTGAAGAGGTTCGCAGGGATAAGGGGTGCAC	3	-	187247430-187247479	3q27.2b	Homo sapiens ets variant gene 5 (ets-related molecule) (ETV5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8152800] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	ERM	ERM
Homo sapiens	RefSeq	NR_002795.2	ILMN_366795	HOXA11AS	NR_002795.2	NR_002795.2		221883	197313738	NR_002795.2	HOXA11AS		ILMN_3249281	0005570768	S	1497	TCTTTCCACAGCCTTTGCAGGCGGAATATCGGAATAAAGTGGGTCCAGGC	7	+	27228860-27228909	7p15.2a	Homo sapiens HOXA11 antisense RNA (non-protein coding) (HOXA11AS), antisense RNA.					
Homo sapiens	RefSeq	NM_022112.1	ILMN_12701	TP53AIP1	NM_022112.1	NM_022112.1		63970	11545826	NM_022112.1	TP53AIP1	NP_071395.1	ILMN_1704576	0001660291	S	1238	CCTGAGTGGCAGCGTCATCACTTTGCTGAGGTGAAATGCCCCTGGATGCC	11	-	128806636-128806685	11q24.3a	Homo sapiens tumor protein p53 regulated apoptosis inducing protein 1 (TP53AIP1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11030628] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11030628] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 11030628] [evidence ND ]		
Homo sapiens	RefSeq	NM_022112.1	ILMN_12701	TP53AIP1	NM_022112.1	NM_022112.1		63970	11545826	NM_022112.1	TP53AIP1	NP_071395.1	ILMN_2099745	0003710543	S	2341	CTTTCCTTCCTGGAGCCACAGTGCTTAGAGACAGGCCACTGGGGTCAGCA	11	-	128805533-128805582	11q24.3a	Homo sapiens tumor protein p53 regulated apoptosis inducing protein 1 (TP53AIP1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11030628] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11030628] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 11030628] [evidence ND ]		
Homo sapiens	RefSeq	NM_013442.1	ILMN_21419	STOML2	NM_013442.1	NM_013442.1		30968	7305502	NM_013442.1	STOML2	NP_038470.1	ILMN_1663002	0006650458	S	1113	TGATCGAGTCAAGATGAGTTAGTGGAGCTGGGCTTGGCCAGGGAGTCTGG	9	-	35100003-35100031:35100032-35100052	9p13.3b	Homo sapiens stomatin (EPB72)-like 2 (STOML2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10713127] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 10713127] [evidence TAS]	HSPC108; SLP-2	HSPC108; SLP-2
Homo sapiens	RefSeq	XM_001716660.1	ILMN_352468	LOC100130691	XM_001716660.1	XM_001716660.1		100130691	169163506	XM_001716660.1	LOC100130691	XP_001716712.1	ILMN_3273257	0002370563	M	162	GGAGGCACCAACCCAGATGTCCACAGTTCCTTCTGGCCTTCCTTTACCGA	2	-	177858432-177858481	2q31.2a	PREDICTED: Homo sapiens hypothetical protein LOC100130691 (LOC100130691), mRNA.					
Homo sapiens	RefSeq	NM_138932.1	ILMN_18532	A1CF	NM_138932.1	NM_138932.1		29974	20357574	NM_138932.1	A1CF	NP_620310.1	ILMN_2383229	0002600039	A	1826	TGCTGTCCCTAATGCAACTGCACCCGTGTCTGCAGCCCAGCTCAAGCAAG	10	-	52566586-52566635	10q11.23c	Homo sapiens APOBEC1 complementation factor (A1CF), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12881431] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Protein complex that mediates editing of the mRNA encoding apolipoprotein B; catalyzes the deamination of C to U (residue 6666 in the human mRNA). Contains a catalytic subunit, APOBEC-1, and other proteins (e.g. human ASP; rat ASP and KSRP) [goid 30895] [pmid 10781591] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 12881431] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 11871661] [evidence IDA]; Interacting selectively with single-stranded RNA [goid 3727] [pmid 11871661] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12896982] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10669759] [evidence IPI]	ASP; MGC163391; APOBEC1CF; ACF65; ACF64; ACF; RP11-564C4.2	ASP; APOBEC1CF; ACF65; ACF64; RP11-564C4.2; MGC163391; ACF
Homo sapiens	RefSeq	XR_038258.1	ILMN_335282	LOC100128423	XR_038258.1	XR_038258.1		100128423	169202497	XR_038258.1	LOC100128423		ILMN_3176959	0003130273	A	189	ATCGACCACTCCAGAGGAAACACATGGTCACCAATGTCCTTCACCCCGGA	11	+	3537506-3537555	11p15.4d	PREDICTED: Homo sapiens misc_RNA (LOC100128423), miscRNA.					
Homo sapiens	RefSeq	NM_006788.3	ILMN_178794	RALBP1	NM_006788.3	NM_006788.3		10928	46358409	NM_006788.3	RALBP1	NP_006779.1	ILMN_1791840	0001190546	S	4228	GAGGACTCAGCACAGCCAACCATAATCAGCATGTCTGGGATAGACTGGTC	18	+	9526418-9526467	18p11.22b	Homo sapiens ralA binding protein 1 (RALBP1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11437348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10924126] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 11437348] [evidence IDA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 10924126] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10848592] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7673236] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 7673236] [evidence IPI]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [pmid 7673236] [evidence IDA]; Any process that activates or increases the activity of the GTPase Cdc42 [goid 43089] [pmid 7673236] [evidence IDA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 7673236] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9422736] [evidence IPI]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 10924126] [evidence IDA]; Interacting selectively with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases [goid 17160] [pmid 7673236] [evidence IPI]; Interacting selectively with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases [goid 17160] [pmid 9753634] [evidence IPI]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [pmid 7673236] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the transport of a substance [goid 43492] [pmid 11437348] [evidence IDA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [pmid 7673236] [evidence IPI]	RIP; RIP1; RLIP76	RIP; RIP1; RLIP76
Homo sapiens	RefSeq	NM_032522.2	ILMN_25899	ZBTB37	NM_032522.2	NM_032522.2		84614	34147425	NM_032522.2	ZBTB37	NP_115911.1	ILMN_1785960	0005810370	S	973	ACTGAAAATCTGGAGGAGTGGCTTGGGCCTGAGAATCAGCCTTCTGGAGA	1	+	172106725-172106774	1q25.1a	Homo sapiens zinc finger and BTB domain containing 37 (ZBTB37), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC2629; D430004I08Rik	MGC2629; D430004I08Rik
Homo sapiens	RefSeq	NR_030737.1	ILMN_388388	TTC3L	NR_030737.1	NR_030737.1		286495	268370095	NR_030737.1	TTC3L		ILMN_3310271	0006400477	S	2156	ACTTGTGATCTCCTGTCAGAAGAGTAGCCTGCACCTTCTGGAAGAGGCTG				Xq13.3b	Homo sapiens tetratricopeptide repeat domain 3-like (TTC3L), non-coding RNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_130446.1	ILMN_17779	KLHL6	NM_130446.1	NM_130446.1		89857	18482382	NM_130446.1	KLHL6	NP_569713.1	ILMN_1768814	0002470338	S	4798	GAAGGGACTCCAGTTGCCAAGGTTGATCTGAAACAGGCAGGGAGCTAAGC	3	-	184688638-184688687	3q27.1a	Homo sapiens kelch-like 6 (Drosophila) (KLHL6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ00029	FLJ00029
Homo sapiens	RefSeq	XM_001726838.1	ILMN_346635	LOC100134778	XM_001726838.1	XM_001726838.1		100134778	169170698	XM_001726838.1	LOC100134778	XP_001726890.1	ILMN_3244917	0007000717	S	168	AAGAGCAGAGGCAGGAGAGGCACTGCATAACTCCTCTCAGGCAGCCCTCT	7	+	152750433-152750482		PREDICTED: Homo sapiens hypothetical protein LOC100134778 (LOC100134778), mRNA.					
Homo sapiens	RefSeq	NM_017425.2	ILMN_9648	SPA17	NM_017425.2	NM_017425.2		53340	15718773	NM_017425.2	SPA17	NP_059121.1	ILMN_1678423	0005310286	S	488	CTGTCAAAATCCAAGCTGCCTTCCGGGGACACATAGCCAGAGAGGAGGCA	11	+	124069448-124069497	11q24.2a	Homo sapiens sperm autoantigenic protein 17 (SPA17), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8688458] [evidence TAS]; The union of male and female gametes to form a zygote [goid 7338] [pmid 8688458] [evidence TAS]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]	Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]	SP17; SP17-1	SP17; SP17-1
Homo sapiens	RefSeq	NM_052828.1	ILMN_20158	TRIM10	NM_052828.1	NM_052828.1		10107	16519560	NM_052828.1	TRIM10	NP_439893.1	ILMN_1746788	0001990110	I	2788	CTGCTATGCTGCACTGCCTCATTCAGAGATAGATGCCTGCATGGGTCCTG	6	-	30227870-30227919	6p21.33b	Homo sapiens tripartite motif-containing 10 (TRIM10), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC141979; RFB30; RNF9; HERF1	MGC141979; RFB30; RNF9; HERF1
Homo sapiens	RefSeq	XM_941500.1	ILMN_44100	LOC652156	XM_941500.1	XM_941500.1		652156	89062440	XM_941500.1	LOC652156	XP_946593.1	ILMN_1800555	0004590114	S	322	CTCCCGCCGCCACAGGTTTTTACCGCTGCGTCTTTTTCACCCCGCCTTTG					PREDICTED: Homo sapiens similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (LOC652156), mRNA.					
Homo sapiens	RefSeq	XM_926530.1	ILMN_33860	LOC643161	XM_926530.2	XM_926530.2		643161	113421655	XM_926530.2	LOC643161	XP_931623.1	ILMN_1809783	0006400735	S	101	AGGGAGCCATTCATGCCGTGGAAGAAGTGGTGAAGGAGGTGGTGGGACAC	10	+	88770126-88770134:88772051-88772091	10q23.2b	PREDICTED: Homo sapiens hypothetical LOC643161 (LOC643161), mRNA.					
Homo sapiens	RefSeq	XR_015869.1	ILMN_175065	LOC729032	XR_015869.1	XR_015869.1		729032	113414419	XR_015869.1	LOC729032		ILMN_3303920	0000870768	M	237	GACACGTCCGCACCAAGATGAAGAGAGAAGAGCTAAGCAACGCCCTGCCC	3	+	41972177-41972226	3p22.1b	PREDICTED: Homo sapiens misc_RNA (LOC729032), miscRNA.					
Homo sapiens	RefSeq	XM_931993.1	ILMN_41768	LOC644065	XM_931993.1	XM_931993.1		644065	88982420	XM_931993.1	LOC644065	XP_937086.1	ILMN_1763769	0001850044	S	241	AATGCTCAGAGCTTCACAGGCCGCCGACCGGAGGCGGGACTGGGAGGAAA	5	-	1929974-1930023	5p15.33c	PREDICTED: Homo sapiens hypothetical LOC644065 (LOC644065), mRNA.					
Homo sapiens	RefSeq	NM_014008.1	ILMN_24735	CCDC22	NM_014008.2	NM_014008.2		28952	83776604	NM_014008.2	CCDC22	NP_054727.1	ILMN_1781234	0005490411	S	1937	AGCTGGGCAAGAAGACCCTCAGCAACCTGGAGAAGATCCGGGAGGACTAC	X	+	48993563-48993612	Xp11.23b	Homo sapiens coiled-coil domain containing 22 (CCDC22), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	JM1; CXorf37	JM1; CXorf37
Homo sapiens	Unigene	Hs.545352	ILMN_108578	HS.545352	Hs.545352		Hs.545352		27832576	BX103864			ILMN_1865317	0000840093	S	204	GGGAAAGTGGTTCTAGTGATGGCAGAGACCTGATGTAAAAGACTCGTGTG	8	+	81964381-81964430		BX103864 NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGp998L192231, mRNA sequence					
Homo sapiens	RefSeq	NM_002052.2	ILMN_28757	GATA4	NM_002052.2	NM_002052.2		2626	33188460	NM_002052.2	GATA4	NP_002043.2	ILMN_1749866	0003440239	S	3262	CCAAAGGCCCCCTCGTATACCCTCCCTAACCCACAAACCTGTTAACATTG	8	+	11654808-11654857	8p23.1b-p23.1a	Homo sapiens GATA binding protein 4 (GATA4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12845333] [evidence NAS]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence ISS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]; Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor [goid 10575] [evidence ISS]; The establishment, maintenance and elaboration of cell differentiation that results in the anterior/posterior subdivision of the embryonic heart tube. In Drosophila this results in subdivision of the dorsal vessel into to the posterior heart proper and the anterior aorta [goid 35054] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [evidence ISS]; Any process that activates or increases angiogenesis [goid 45766] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process by which the anatomical structures of the gut are generated and organized during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48558] [evidence IEA]; The process by which anatomical structures are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form. The embryonic phase begins with zygote formation. The end of the embryonic phase is organism-specific. For example, it would be at birth for mammals, larval hatching for insects and seed dormancy in plants [goid 48598] [evidence IEA]; The process by which the anatomical structures of the foregut are generated and organized, during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48617] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12845333] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126629	MGC126629
Homo sapiens	RefSeq	NM_199487.1	ILMN_16175	UQCC	NM_199487.1	NM_199487.1		55245	41327686	NM_199487.1	UQCC	NP_955781.1	ILMN_2381121	0000620075	A	1645	CTCCCAGTGAACTGAATGAGGAACATGCTGTCTCCTGTCTTGGCCTCCCC	20	-	33890929-33890978	20q11.22b	Homo sapiens ubiquinol-cytochrome c reductase complex chaperone (UQCC), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]			MGC141902; BFZB; C20orf44; CBP3; MGC104353	MGC141902; BFZB; C20orf44; CBP3; MGC104353
Homo sapiens	RefSeq	XM_929878.1	ILMN_36100	LOC646915	XM_929878.2	XM_929878.2		646915	113413263	XM_929878.2	LOC646915	XP_934971.2	ILMN_1815210	0003520577	S	2561	AAAAAGATAGGGGTGAGGTGTGGTCTATCTCCTGCTTCACCCAGGCCCTG	2	+	132796551-132796600	2q21.2a	PREDICTED: Homo sapiens similar to zinc finger protein 285 (LOC646915), mRNA.					
Homo sapiens	RefSeq	XM_496697.2	ILMN_166821	LOC728811	XR_015382.1	XR_015382.1		728811	113415620	XR_015382.1	LOC728811		ILMN_1740443	0005080138	S	766	GCAGCCCACGACCTCACCTGGTTCCAATACCACAACTTGCATGTGATTAG	4	-	69253013-69253062	4q13.2c	PREDICTED: Homo sapiens similar to UDP glycosyltransferase 2 family, polypeptide B17 (LOC728811), mRNA.					
Homo sapiens	RefSeq	XM_001720756.1	ILMN_351053	LOC100129907	XM_001720756.1	XM_001720756.1		100129907	169210211	XM_001720756.1	LOC100129907	XP_001720808.1	ILMN_3271587	0005080630	M	885	CTCTGAGCTTCAGTTTCATTTTCTACGACATGGGGATAACCCTCCGGTGC				16p11.2c	PREDICTED: Homo sapiens hypothetical protein LOC100129907 (LOC100129907), mRNA.					
Homo sapiens	RefSeq	XR_017375.2	ILMN_179013	LOC439953	XR_017375.2	XR_017375.2		439953	169191958	XR_017375.2	LOC439953		ILMN_3290298	0003890360	M	553	TAACCACCAGACCATTCCTTCTGTAGTTCAGGAGAACACCCTTCCACCCC	10	-	32517183-32517232	10p11.22b	PREDICTED: Homo sapiens misc_RNA (LOC439953), miscRNA.					
Homo sapiens	RefSeq	XR_017375.2	ILMN_179013	LOC439953	XR_017375.2	XR_017375.2		439953	169191958	XR_017375.2	LOC439953		ILMN_3213792	0002100112	A	219	ATCAGGGTCGTGACTTCACACGCCATAATGGCACTGGTGGCAAGTCCATC	10	-	32517517-32517566	10p11.22b	PREDICTED: Homo sapiens misc_RNA (LOC439953), miscRNA.					
Homo sapiens	RefSeq	NM_003189.1	ILMN_8222	TAL1	NM_003189.1	NM_003189.1		6886	4507362	NM_003189.1	TAL1	NP_003180.1	ILMN_1748450	0002030746	S	4665	CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTG	1	-	47454837-47454886	1p33d	Homo sapiens T-cell acute lymphocytic leukemia 1 (TAL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 2303035] [evidence TAS]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2303035] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9824680] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	SCL; tal-1; TCL5	tal-1; SCL; TCL5
Homo sapiens	RefSeq	NM_018388.2	ILMN_17699	MBNL3	NM_018388.2	NM_018388.2		55796	19387843	NM_018388.2	MBNL3	NP_060858.2	ILMN_1765184	0004210537	I	2517	CTGGGAAAGATGGTTGTAGTTGTCTTTAGCTTCGGTTCAACTGAGTTTCG	X	-	131512271-131512320	Xq26.2a	Homo sapiens muscleblind-like 3 (Drosophila) (MBNL3), transcript variant G, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of myoblast differentiation. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 45662] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MBLX39; MBLX; FLJ11316; CHCR; MBXL	MBLX39; MBLX; FLJ11316; CHCR; MBXL
Homo sapiens	RefSeq	XR_001345.1	ILMN_35344	C14ORF128	XR_001345.1	XR_001345.1		84837	89037643	XR_001345.1	C14orf128		ILMN_1804908	0006450431	A	1694	GGTGGGTGGTCCAACCATCAAAATGTGGTACTAATGCCATAGGTATCTAC				14q12e	PREDICTED: Homo sapiens chromosome 14 open reading frame 128 (C14orf128), misc RNA.					
Homo sapiens	RefSeq	XM_940033.1	ILMN_32167	LOC650943	XM_940033.1	XM_940033.1		650943	89066422	XM_940033.1	LOC650943	XP_945126.1	ILMN_1715588	0007330484	S	271	GTGCTGCCGCTGCACCTGGAGTCTTTTGATACTCAAGATCATGACCTAGC					PREDICTED: Homo sapiens similar to nodal modulator 2 isoform 2 (LOC650943), mRNA.					
Homo sapiens	RefSeq	NR_000010.1	ILMN_1029	SNORD4A	NR_000010.1	NR_000010.1		26773	22546005	NR_000010.1	SNORD4A		ILMN_1716441	0004490048	S	23	AGCGACCAAAGTCTGAACAAAGTGATTGGTACCTCGTTGTCTGATGCACC	17	+	24073749-24073798	17q11.2a	Homo sapiens small nucleolar RNA, C/D box 4A (SNORD4A), small nucleolar RNA.				RNU101A; Z17A; mgh18S-121	RNU101A; Z17A; mgh18S-121
Homo sapiens	RefSeq	NM_002762.2	ILMN_2715	PRM2	NM_002762.2	NM_002762.2		5620	68989266	NM_002762.2	PRM2	NP_002753.2	ILMN_1681772	0003780224	S	474	CCAAGTGAGGCCATAGCAATTCCCCTACATCAAATGCTCAAGCCCCCAGC	16	-	11369652-11369701	16p13.13c	Homo sapiens protamine 2 (PRM2), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2081589] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process by which DNA and associated proteins are formed into a compact, orderly structure [goid 6323] [pmid 2081589] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 2081589] [evidence TAS]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2081589] [evidence TAS]	FLJ27447	FLJ27447
Homo sapiens	RefSeq	NR_003952.1	ILMN_350434	LOC643955	NR_003952.1	NR_003952.1		643955	158262018	NR_003952.1	LOC643955		ILMN_3248500	0000130204	S	1107	ACCCTACACATATGAAGAATGTGGCCAAGACTTTAGGCGCTCCTCAGCAC	7	-	62752279-62752328	7q11.21b	Homo sapiens zinc finger protein 479 pseudogene (LOC643955), non-coding RNA.					
Homo sapiens	RefSeq	NR_003267.1	ILMN_175199	GGT3P	NR_003267.1	NR_003267.1		2679	117940050	NR_003267.1	GGT3P		ILMN_2190486	0004760274	S	918	CAGGCGGCTGGGGGCATTGTGACAGCTGAGGACCTGAACAACTACTGTGC	22	-	18767012-18767052:18769102-18769110	22q11.21b	Homo sapiens gamma-glutamyltransferase 3 pseudogene (GGT3P), non-coding RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]	Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]; Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	Unigene	Hs.564077	ILMN_116810	HS.564077	Hs.564077		Hs.564077		83096870	DB074408			ILMN_1819181	0003060674	S	326	GGCACTGGCTCCCAACCAAGGCTCCAGCTCCACAAACCTCAAACTAGAAC	7	-	57292994-57293043		DB074408 TESTI4 Homo sapiens cDNA clone TESTI4017996 5, mRNA sequence					
Homo sapiens	RefSeq	XM_379664.2	ILMN_45278	C9ORF110	XM_379664.2	XM_379664.2		401549	89029970	XM_379664.2	C9orf110	XP_379664.2	ILMN_1808873	0003170095	S	5259	TATGCTGAGGGAGGTGGTGACGGATACCTACTTCTTTTCATGGGAAGGTG	9	-	114907291-114907340		PREDICTED: Homo sapiens chromosome 9 open reading frame 110 (C9orf110), mRNA.					
Homo sapiens	Unigene	Hs.582706	ILMN_134887	HS.582706	Hs.582706		Hs.582706		83108385	DB303407			ILMN_1822281	0001820465	S	492	GCAAACATCATACTGTGTACTTCACAACCATCTACACCGTGAGACCAACC					DB303407 BRAMY3 Homo sapiens cDNA clone BRAMY3015426 3, mRNA sequence					
Homo sapiens	RefSeq	NM_007224.1	ILMN_17963	NXPH4	NM_007224.1	NM_007224.1		11247	39930314	NM_007224.1	NXPH4	NP_009155.1	ILMN_2237211	0004540458	I	162	AGAAGATGCGGCTGCTCCCGGAATGGTTCCTCTTGCTCTTTGGCCCGTGG	12	+	55897006-55897019:55897020-55897055	12q13.3b	Homo sapiens neurexophilin 4 (NXPH4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 9570794] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 9570794] [evidence ND ]	NPH4	NPH4
Homo sapiens	RefSeq	NM_054013.1	ILMN_14669	MGAT4B	NM_054013.2	NM_054013.2		11282	83267864	NM_054013.2	MGAT4B	NP_463459.1	ILMN_1809272	0004060288	I	714	GGAGCGTGTGCTGCAAAAAGCAAGAGTGGGCTTTGGAGGCCAACGGATGG	5	-	179161914-179161963	5q35.3e	Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B (MGAT4B), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [pmid 10372966] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R [goid 8454] [pmid 10372966] [evidence TAS]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]	GNT-IVB; GNT-IV	GnT-Ivb; GNT-IV
Homo sapiens	RefSeq	NM_054013.1	ILMN_14669	MGAT4B	NM_054013.2	NM_054013.2		11282	83267864	NM_054013.2	MGAT4B	NP_463459.1	ILMN_1796106	0004060364	A	2671	TACCCTGTGGCCAGCCCTGAAGCCCACATTTCTGGGGGTGTCGTCACTGC	5	-	179157582-179157631	5q35.3e	Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B (MGAT4B), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [pmid 10372966] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + (N-acetyl-beta-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,4-(N-acetyl-D-glucosaminyl-1,2)-alpha-D-mannosyl-1,3-(beta-N-acetyl-D-glucosaminyl-1,2-alpha-D-mannosyl-1,6)-beta-D-mannosyl-R [goid 8454] [pmid 10372966] [evidence TAS]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]	GNT-IVB; GNT-IV	GnT-Ivb; GNT-IV
Homo sapiens	RefSeq	NM_000291.2	ILMN_180949	PGK1	NM_000291.2	NM_000291.2		5230	22095338	NM_000291.2	PGK1	NP_000282.1	ILMN_2216852	0000360735	S	2175	CCATGGAGGAAGGCTCTGTTCCACATATATTTCCACTTCTTCATTCTCTC	X	+	77268835-77268884	Xq21.1a	Homo sapiens phosphoglycerate kinase 1 (PGK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate [goid 4618] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC117307; MIG10; MGC8947; PGKA; MGC142128	MIG10; MGC142128; MGC117307; MGC8947; PGKA
Homo sapiens	RefSeq	NM_000291.2	ILMN_180949	PGK1	NM_000291.2	NM_000291.2		5230	22095338	NM_000291.2	PGK1	NP_000282.1	ILMN_1755749	0006110400	S	1047	GGCTGTCACTCGGGCTAAGCAGATTGTGTGGAATGGTCCTGTGGGGGTAT	X	+	77267068-77267117	Xq21.1a	Homo sapiens phosphoglycerate kinase 1 (PGK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate [goid 4618] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC117307; MIG10; MGC8947; PGKA; MGC142128	MIG10; MGC142128; MGC117307; MGC8947; PGKA
Homo sapiens	RefSeq	XM_927324.1	ILMN_43794	LOC644097	XM_927324.1	XM_927324.1		644097	88952985	XM_927324.1	LOC644097	XP_932417.1	ILMN_1785990	0000460181	S	134	AAGTGGAGCCTGAAGATGTGACTGAATTGCTTCAATCTCATGATGAAACT	2	-	6460364-6460413		PREDICTED: Homo sapiens hypothetical protein LOC644097 (LOC644097), mRNA.					
Homo sapiens	Unigene	Hs.163813	ILMN_79929	HS.163813	Hs.163813		Hs.163813		780041	R25153			ILMN_1872973	0003360170	S	171	GTTTATCTGCTCTGATCAGGGGAAGGACAAACAGTGGGGAGAGTCAGGGC	1	+	3792091-3792098:3792100-3792114:3792116-3792126		yh36h11.s1 Soares placenta Nb2HP Homo sapiens cDNA clone IMAGE:131877 3, mRNA sequence					
Homo sapiens	RefSeq	NM_024646.1	ILMN_16610	ZYG11B	NM_024646.1	NM_024646.1		79699	55742692	NM_024646.1	ZYG11B	NP_078922.1	ILMN_1656676	0007400296	S	6333	GGAAGTTGCCCTTACAGGTGGGACCTTTTGTGTTAATCTGTTTTCTCCCC	1	+	53063842-53063891	1p32.3d	Homo sapiens zyg-11 homolog B (C. elegans) (ZYG11B), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ13456; ZYG11	FLJ13456; ZYG11
Homo sapiens	RefSeq	XR_019325.2	ILMN_180619	LOC646269	XR_019325.2	XR_019325.2		646269	169168903	XR_019325.2	LOC646269		ILMN_3290275	0004640475	M	530	CGAGTTCGACACTGGTGACTAGAGGTACTAACCTGGGAAGAATTGGTGTG				6q25.2c	PREDICTED: Homo sapiens misc_RNA (LOC646269), miscRNA.					
Homo sapiens	RefSeq	XM_945846.1	ILMN_38118	USP22	XM_945846.1	XM_945846.1		23326	89042517	XM_945846.1	USP22	XP_950939.1	ILMN_1697145	0006450286	I	94	GAGCCTTGTGTCTCTGGGCCTGATGATTTTAATGATGCTGAGTCCTGCCG				17p11.2b	PREDICTED: Homo sapiens ubiquitin specific peptidase 22, transcript variant 3 (USP22), mRNA.	A large multiprotein complex that possesses histone acetyltransferase activity and is involved in regulation of transcription. The budding yeast complex includes Gcn5p, several proteins of the Spt and Ada families, and several TBP-associate proteins (TAFs); analogous complexes in other species have analogous compositions, and usually contain homologs of the yeast proteins [goid 124] [pmid 18206973] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18206973] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 16378762] [evidence NAS]; The modification of histones by removal of ubiquitin groups [goid 16578] [pmid 18206973] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [pmid 18206973] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 18206973] [evidence IMP]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H4 [goid 10485] [pmid 18206973] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_001726340.1	ILMN_346044	LOC100130109	XM_001726340.1	XM_001726340.1		100130109	169213674	XM_001726340.1	LOC100130109	XP_001726392.1	ILMN_3189188	0000060538	A	359	TGTGAAGATTTATTCATATTGTTTTGATTACCGTTGTGTTACTACAAGAT				19p13.3b	PREDICTED: Homo sapiens similar to hCG23490 (LOC100130109), mRNA.					
Homo sapiens	RefSeq	NM_002031.2	ILMN_29306	FRK	NM_002031.2	NM_002031.2		2444	31657133	NM_002031.2	FRK	NP_002022.1	ILMN_1727605	0001090682	S	2763	TAGGAAAATGAGAGGAGAACAGTAGGATTGCTGTGGCCTAGACTTCTGAG	6	-	116370213-116370262	6q22.1d	Homo sapiens fyn-related kinase (FRK), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 7510261] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7696183] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7696183] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7664264] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 7510261] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PTK5; GTK; RAK	PTK5; GTK; RAK
Homo sapiens	RefSeq	Hs.577249	ILMN_182493	LOC650465	XR_018915.1	XR_018915.1		650465	113422737	XR_018915.1	LOC650465		ILMN_1853837	0003520739	S	451	CTGCATGGTTGTTCTTTGGGCTTGCCACACTGACTGGAGGCACCCTGTGG					PREDICTED: Homo sapiens similar to Short transient receptor potential channel 2 (TrpC2) (mTrp2) (LOC650465), mRNA.					
Homo sapiens	RefSeq	NM_005745.6	ILMN_2815	BCAP31	NM_005745.6	NM_005745.6		10134	49472837	NM_005745.6	BCAP31	NP_005736.3	ILMN_1812403	0006450138	S	1155	TGGAGAGCACGAGTTAGTTGTAGTCCGGCTTGCGGTGGGGCTGACTTCCT	X	-	152619265-152619314	Xq28f	Homo sapiens B-cell receptor-associated protein 31 (BCAP31), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8706661] [evidence IDA]; The lipid bilayer surrounding any of the compartments of the ER-Golgi intermediate compartment system [goid 33116] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence NAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence NAS]	DXS1357E; 6C6-AG; CDM; BAP31	DXS1357E; 6C6-AG; CDM; BAP31
Homo sapiens	RefSeq	NM_022051.1	ILMN_27999	EGLN1	NM_022051.1	NM_022051.1		54583	13489072	NM_022051.1	EGLN1	NP_071334.1	ILMN_1749892	0004670102	S	3972	CATGAGCAGCATGGACGACCTGATACGCCACTGTAACGGGAAGCTGGGCA	1	-	229623392-229623441	1q42.2a	Homo sapiens egl nine homolog 1 (C. elegans) (EGLN1), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8606489] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 16956324] [evidence IDA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification [goid 19538] [evidence IEA]; A homeostatic process involved in the maintenance of an internal equilibrium of oxygen within an organism or cell [goid 32364] [pmid 16956324] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 16956324] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15721254] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with L-ascorbic acid, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate; L-ascorbic acid is vitamin C and has co-factor and anti-oxidant activities in many species [goid 31418] [evidence IEA]; Catalysis of the transfer of a hydroxyl group from 2-oxoglutarate to a prolyl residue in a protein [goid 31543] [pmid 16956324] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SM20; PHD2; ECYT3; SM-20; HIFPH2; ZMYND6; C1orf12; DKFZp761F179	SM20; PHD2; ECYT3; SM-20; HIFPH2; ZMYND6; C1orf12; DKFZp761F179
Homo sapiens	RefSeq	XM_943780.1	ILMN_43031	LOC649584	XM_943780.1	XM_943780.1		649584	89031790	XM_943780.1	LOC649584	XP_948873.1	ILMN_1687475	0006370349	S	1431	TGCCATGTTCTCCCCGTTATACCTCATCCCTTAGGCTATTCTTGTAGCCC					PREDICTED: Homo sapiens hypothetical protein LOC649584 (LOC649584), mRNA.					
Homo sapiens	RefSeq	NM_001001938.1	ILMN_27132	C9ORF47	NM_001001938.2	NM_001001938.2		286223	141803121	NM_001001938.2	C9orf47	NP_001001938.1	ILMN_1794672	0006560132	S	4501	GTAGCACTTGGAAGAGAGTGGAACGACCAGGCAAGGATGTGCCGTGGAGG	9	+	90800547-90800596	9q22.1d	Homo sapiens chromosome 9 open reading frame 47 (C9orf47), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ37523; C9orf108; bA791O21.3	FLJ37523; C9orf108; bA791O21.3
Homo sapiens	RefSeq	NM_005873.1	ILMN_42727	RGS19	NM_005873.2	NM_005873.2		10287	86990433	NM_005873.2	RGS19	NP_005864.1	ILMN_1677085	0000730685	S	1290	CCCAGACAAGCCTTTGGTGGGGAACAGAACCTCCGCATCGTGTAGTTTTG	20	-	62704787-62704836	20q13.33e	Homo sapiens regulator of G-protein signaling 19 (RGS19), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9571244] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9571244] [evidence TAS]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [pmid 8524874] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8524874] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 9571244] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9770488] [evidence IPI]	RGSGAIP; GAIP	RGSGAIP; GAIP
Homo sapiens	RefSeq	NM_000815.2	ILMN_22124	GABRD	NM_000815.2	NM_000815.2		2563	34734070	NM_000815.2	GABRD	NP_000806.2	ILMN_1779742	0002450524	S	1584	CAGGCAGCCCGAGACCTGCACAGATGAAGGAGCAGAGGTTCTGACCGAGA	1	+	1951786-1951835	1p36.33a	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, delta (GABRD), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2176788] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2176788] [evidence TAS]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [pmid 2176788] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC45284	MGC45284
Homo sapiens	RefSeq	NM_002388.3	ILMN_25553	MCM3	NM_002388.3	NM_002388.3		4172	33356548	NM_002388.3	MCM3	NP_002379.2	ILMN_1806818	0006290494	S	2487	CAGGATGACAATCAGGTCATGGTGTCTGAGGGCATCATCTTCCTCATCTG	6	-	52237345-52237394	6p12.2a	Homo sapiens minichromosome maintenance complex component 3 (MCM3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10846177] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [pmid 1549468] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [pmid 1549468] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1549468] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12364596] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15654075] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	RLFB; HCC5; P1-MCM3; MGC1157; P1.h	RLFB; HCC5; P1-MCM3; MGC1157; P1.h
Homo sapiens	RefSeq	NM_001039887.1	ILMN_37652	C19ORF55	NM_001039887.1	NM_001039887.1		148137	89941478	NM_001039887.1	C19orf55	NP_001034976.1	ILMN_2195397	0005870750	S	1829	CTCCACGGAGGAAGCTACTAGGGTCATCAGAGTGTTGGATGATGGTCAGG	19	+	36259759-36259808	19q13.12a	Homo sapiens chromosome 19 open reading frame 55 (C19orf55), mRNA.				DKFZp434C2231; MGC131952; FLJ30657	DKFZp434C2231; MGC131952; FLJ30657
Homo sapiens	RefSeq	NM_032024.2	ILMN_17394	C10ORF11	NM_032024.3	NM_032024.3		83938	142361059	NM_032024.3	C10orf11	NP_114413.1	ILMN_1783247	0000650743	S	567	CTGGATGCCCAGAAAGTAACCAGACAAGAACGAGAGGAGGCGTTGGTCAG	10	+	77488467-77488516	10q22.2c-q22.3a	Homo sapiens chromosome 10 open reading frame 11 (C10orf11), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDA017	CDA017
Homo sapiens	RefSeq	NM_152832.1	ILMN_306694	FAM89B	NM_001098784.1	NM_001098784.1		23625	149192852	NM_001098784.1	FAM89B	NP_001092254.1	ILMN_1804117	0002000224	S	1232	GAGTGCCTGGCTCCCATCTCCTCCTCACCTTTTGTTGCTATCGGCAGCTG	11	+	65098019-65098068	11q13.1c	Homo sapiens family with sequence similarity 89, member B (FAM89B), transcript variant 3, mRNA.				MTVR1	MTVR1
Homo sapiens	RefSeq	XM_497182.2	ILMN_38310	LOC644670	XM_497182.3	XM_497182.3		644670	113430235	XM_497182.3	LOC644670	XP_497182.3	ILMN_1710177	0001770164	S	399	TGAGTTTCTCGCTGGTGGTTCAAGTTTCTGGGGTGGTCAGGTGTGCTCCG	X	+	124585-124634		PREDICTED: Homo sapiens hypothetical LOC644670 (LOC644670), mRNA.					
Homo sapiens	RefSeq	NM_006892.3	ILMN_182605	DNMT3B	NM_006892.3	NM_006892.3		1789	28559059	NM_006892.3	DNMT3B	NP_008823.1	ILMN_2328972	0006450307	A	3913	CCCCACATCTGAGAGATGACAGGGAAAACTGCAAAGCTCGGTGCTCCCTT	20	+	30860400-30860449	20q11.21c	Homo sapiens DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10433969] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IEA]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10555141] [evidence NAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10433969] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 11102980] [evidence NAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IEA]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 10647011] [evidence NAS]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 10433969] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16682412] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11735126] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ICF; M.HsaIIIB	ICF; M.HsaIIIB
Homo sapiens	RefSeq	NM_006892.3	ILMN_182605	DNMT3B	NM_006892.3	NM_006892.3		1789	28559059	NM_006892.3	DNMT3B	NP_008823.1	ILMN_1794692	0006060653	A	3799	CCTCCACAGGCACAGGTCCCCAGATGAGAAGTCTGCTACCCTCATTTCTC	20	+	30860286-30860335	20q11.21c	Homo sapiens DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10433969] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IEA]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10555141] [evidence NAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10433969] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 11102980] [evidence NAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IEA]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 10647011] [evidence NAS]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 10433969] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16682412] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11735126] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ICF; M.HsaIIIB	ICF; M.HsaIIIB
Homo sapiens	RefSeq	NM_006892.3	ILMN_182605	DNMT3B	NM_006892.3	NM_006892.3		1789	28559059	NM_006892.3	DNMT3B	NP_008823.1	ILMN_2328977	0004220452	A	4201	TGTAACTGGAGCCACGACGTAACAAATATGGGGAAAAAACTGTGCCTTGT	20	+	30860688-30860737	20q11.21c	Homo sapiens DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10433969] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IEA]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10555141] [evidence NAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10433969] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 11102980] [evidence NAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IEA]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 10647011] [evidence NAS]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 10433969] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16682412] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11735126] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ICF; M.HsaIIIB	ICF; M.HsaIIIB
Homo sapiens	RefSeq	NM_006892.3	ILMN_182605	DNMT3B	NM_006892.3	NM_006892.3		1789	28559059	NM_006892.3	DNMT3B	NP_008823.1	ILMN_1733929	0006200563	I	1397	AGTCGAAGGTGCGTCGTGCAGGCAGTAGGAAATTAGAATCAAGGAAATAC	20	+	30845012-30845061	20q11.21c	Homo sapiens DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10433969] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A condensed form of chromatin, occurring in the nucleus during interphase, that stains strongly with basophilic dyes. The DNA of heterochromatin is typically replicated at a later stage in the cell-division cycle than euchromatin [goid 5720] [evidence IEA]	The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10555141] [evidence NAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 10433969] [evidence TAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [pmid 11102980] [evidence NAS]; The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine [goid 6306] [evidence IEA]; Heritable alterations in the activity of a gene that depend on whether it passed through the paternal or the maternal germline, but that are not encoded by DNA itself [goid 6349] [evidence IEA]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 10647011] [evidence NAS]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [pmid 10433969] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16682412] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11735126] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing cytosine = S-adenosyl-L-homocysteine + DNA containing 5-methylcytosine [goid 3886] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ICF; M.HsaIIIB	ICF; M.HsaIIIB
Homo sapiens	RefSeq	NM_032967.1	ILMN_28058	PCDH11X	NM_032967.1	NM_032967.1		27328	14589917	NM_032967.1	PCDH11X	NP_116749.1	ILMN_2285951	0004290369	I	3865	GGAAGAGACAGTGCAGCACAATAACAGAGTACTCTCATGCTGTTTCTCTG	X	+	91024804-91024853	Xq21.31e	Homo sapiens protocadherin 11 X-linked (PCDH11X), transcript variant b, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10644456] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10644456] [evidence TAS]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH11; PCDH-X; PCDHY; PCDHX	PCDH11; PCDH-X; PCDHY; PCDHX
Homo sapiens	RefSeq	NM_032967.1	ILMN_28058	PCDH11X	NM_032967.1	NM_032967.1		27328	14589917	NM_032967.1	PCDH11X	NP_116749.1	ILMN_2285952	0001770736	I	393	GCGAATAAGAAGGATTCCACAGATCACATACCGGAGAGGTTTTGCCTCAG	X	+	90952140-90952189	Xq21.31e	Homo sapiens protocadherin 11 X-linked (PCDH11X), transcript variant b, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10644456] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10644456] [evidence TAS]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH11; PCDH-X; PCDHY; PCDHX	PCDH11; PCDH-X; PCDHY; PCDHX
Homo sapiens	RefSeq	NM_207413.1	ILMN_22911	UNQ9433	NM_207413.1	NM_207413.1		389658	46409457	NM_207413.1	UNQ9433	NP_997296.1	ILMN_2091217	0004230446	S	722	AGACTTCCCAGAAATAACTGGTTAGCTGTTTCCTGTCATAGAATGGAGTC	8	-	53609549-53609598	8q11.23b	Homo sapiens RPLK9433 (UNQ9433), mRNA.				MGC163513; MGC163515	MGC163513; MGC163515
Homo sapiens	RefSeq	XM_928271.1	ILMN_36604	LOC645232	XM_928271.1	XM_928271.1		645232	89024634	XM_928271.1	LOC645232	XP_933364.1	ILMN_1773966	0003930121	S	529	AGTGCATGAGGCTGAAAGTTCCAAGCCTCTTACCATGTGGTTTCATGGTA	7	-	70096-70145		PREDICTED: Homo sapiens hypothetical protein LOC645232 (LOC645232), mRNA.					
Homo sapiens	RefSeq	NM_198217.1	ILMN_28636	ING1	NM_198217.1	NM_198217.1		3621	38201662	NM_198217.1	ING1	NP_937860.1	ILMN_1735022	0006660184	I	137	TTCCAAACTGAGTACCGGGAGACGACACAAAGGGAGGGCGGTGACGGATG	13	+	110163220-110163269	13q34a	Homo sapiens inhibitor of growth family, member 1 (ING1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10866301] [evidence NAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8944021] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 8944021] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	p33ING1; p33; p47ING1a; p33ING1b; p47; p24ING1c	p33ING1; p33; p47ING1a; p33ING1b; p47; p24ING1c
Homo sapiens	RefSeq	NM_033513.2	ILMN_26744	C19ORF20	NM_033513.2	NM_033513.2		91978	123173765	NM_033513.2	C19orf20	NP_277048.2	ILMN_2199298	0005220594	S	815	ATGACCCGCGAGGAGTTTCTGGAGAGGGCCGCCGCGCTCTTCATCGCGAA	19	+	470355-470404	19p13.3j	Homo sapiens chromosome 19 open reading frame 20 (C19orf20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement [goid 7288] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IEA]		GTRGEO22	GTRGEO22
Homo sapiens	RefSeq	XM_375665.3	ILMN_46885	LOC116412	XM_375665.3	XM_375665.3		116412	89056977	XM_375665.3	LOC116412	XP_375665.3	ILMN_1773183	0002480647	I	82	ATACTGTGTGTGGTGGTTGGGAGCCAGCAGGCAGCCTGGGTGTGGACAGA	19	-	63581020-63581069	19q13.43c	PREDICTED: Homo sapiens hypothetical protein BC012365 (LOC116412), mRNA.					
Homo sapiens	RefSeq	NM_005651.1	ILMN_16602	TDO2	NM_005651.1	NM_005651.1		6999	5032164	NM_005651.1	TDO2	NP_005642.1	ILMN_1716859	0005810634	S	1173	CATACCTGATTCCCCGACACTGGATACCGAAGATGAACCCAACCATTCAC	4	+	157060480-157060529	4q32.1b	Homo sapiens tryptophan 2,3-dioxygenase (TDO2), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8666386] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IEA]; The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid [goid 19674] [pmid 14704851] [evidence EXP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine [goid 4833] [pmid 8666386] [evidence TAS]; Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine [goid 4833] [pmid 8666386] [evidence EXP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRPO; TDO; TPH2	TRPO; TDO; TPH2
Homo sapiens	RefSeq	NM_005651.1	ILMN_16602	TDO2	NM_005651.1	NM_005651.1		6999	5032164	NM_005651.1	TDO2	NP_005642.1	ILMN_2172091	0006650008	S	1246	CTGTGATAGCTCCTACTTCAGCAGTGATGAATCAGATTAAAATCGTCTGC	4	+	157060553-157060592:157060593-157060602	4q32.1b	Homo sapiens tryptophan 2,3-dioxygenase (TDO2), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8666386] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine [goid 19441] [evidence IEA]; The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid [goid 19674] [pmid 14704851] [evidence EXP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine [goid 4833] [pmid 8666386] [evidence TAS]; Catalysis of the reaction: L-tryptophan + O2 = N-formyl-L-kynurenine [goid 4833] [pmid 8666386] [evidence EXP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRPO; TDO; TPH2	TRPO; TDO; TPH2
Homo sapiens	RefSeq	NR_024074.1	ILMN_365086	GOLGA9P	NR_024074.1	NR_024074.1		283796	196115078	NR_024074.1	GOLGA9P		ILMN_3241725	0002060093	S	1745	AGAGACAGTGGTATAACAGGCTCCTTATGCCAGGTGCAGTGGCTCATGCC	15	+	23262589-23262638	15q11.2c	Homo sapiens golgi autoantigen, golgin subfamily a, 9 pseudogene (GOLGA9P), non-coding RNA.					
Homo sapiens	RefSeq	NR_003693.1	ILMN_346205	SNORD126	NR_003693.1	NR_003693.1		100113391	154800506	NR_003693.1	SNORD126		ILMN_3236804	0004070687	S	41	GTCCGTGTTTCAGCTGATCAGCCTGATTAAACACATGCTCTGAGCAGACT	14	-	20794608-20794657	14q11.2b	Homo sapiens small nucleolar RNA, C/D box 126 (SNORD126), small nucleolar RNA.					
Homo sapiens	RefSeq	XM_001715356.1	ILMN_334531	LOC100133580	XM_001715356.1	XM_001715356.1		100133580	169213108	XM_001715356.1	LOC100133580	XP_001715408.1	ILMN_3235308	0002480377	S	524	AGGTTGGAGCCACTGCCACGAGCCTGTTCTGCACAGACGGGAATGTTTCC					PREDICTED: Homo sapiens hypothetical LOC100133580 (LOC100133580), mRNA.					
Homo sapiens	RefSeq	NM_002638.2	ILMN_13685	PI3	NM_002638.2	NM_002638.2		5266	31657130	NM_002638.2	PI3	NP_002629.1	ILMN_1693192	0001050168	S	353	CTGACTGCCCAGGAATCAAGAAGTGCTGTGAAGGCTCTTGCGGGATGGCC	20	+	43238123-43238172	20q13.12b	Homo sapiens peptidase inhibitor 3, skin-derived (SKALP) (PI3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 8476637] [evidence TAS]	The act of sexual union between male and female, involving the transfer of sperm [goid 7620] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 8476637] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7685029] [evidence TAS]	SKALP; ESI; WAP3; WFDC14; MGC13613	SKALP; ESI; WAP3; WFDC14; MGC13613
Homo sapiens	RefSeq	NM_139168.1	ILMN_8967	SFRS12	NM_139168.2	NM_139168.2		140890	116089323	NM_139168.2	SFRS12	NP_631907.1	ILMN_1720088	0003290669	S	3817	GTATTTAGTGGGGAATGGAAAGAGTTGCCCTTGTTGCAAGTAATGAAGCC	5	+	65476326-65476375	5q12.3b	Homo sapiens splicing factor, arginine/serine-rich 12 (SFRS12), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DKFZp564B176; SRrp508; SRrp86; MGC133045	DKFZp564B176; SRrp508; SRrp86
Homo sapiens	RefSeq	XM_942456.1	ILMN_30746	LOC652796	XM_942456.1	XM_942456.1		652796	89077554	XM_942456.1	LOC652796	XP_947549.1	ILMN_1808759	0004150035	S	8	CCCCAAGGCTGCACCAGGAGCTGGTCTCTGAAGGCCATTCCCTCTCACAA					PREDICTED: Homo sapiens hypothetical protein LOC652796 (LOC652796), mRNA.					
Homo sapiens	RefSeq	NM_033415.2	ILMN_183917	ARMC6	NM_033415.2	NM_033415.2		93436	16445355	NM_033415.2	ARMC6	NP_219483.1	ILMN_1697118	0002060128	S	1974	GCACGGATGTTACTGTCCTGCTCCTTCCCCCAGCCCCACGCCCTACCAGA	19	+	19029665-19029714	19p13.11b	Homo sapiens armadillo repeat containing 6 (ARMC6), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	R30923_1; MGC19595	R30923_1; MGC19595
Homo sapiens	RefSeq	NM_020830.3	ILMN_26189	WDFY1	NM_020830.3	NM_020830.3		57590	51702527	NM_020830.3	WDFY1	NP_065881.1	ILMN_1676448	0003400612	S	4484	GATATGGTGCCCTGTGTATCCCAGAGATGCTAGAAAACTGTTCTTTGCTC	2	-	224740138-224740187	2q36.1d	Homo sapiens WD repeat and FYVE domain containing 1 (WDFY1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11739631] [evidence IDA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11739631] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11739631] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [pmid 11739631] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11739631] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FENS-1; ZFYVE17; WDF1	FENS-1; ZFYVE17; WDF1
Homo sapiens	RefSeq	NM_005079.2	ILMN_8812	TPD52	NM_005079.2	NM_005079.2		7163	70608192	NM_005079.2	TPD52	NP_005070.1	ILMN_2381064	0002570161	A	3875	GTTTGTAAGTTCTCAGAGAGTCGGGTCTGCAAGTGCTTTTGCCTGCCAGG	8	-	81109694-81109743	8q21.13a	Homo sapiens tumor protein D52 (TPD52), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15576473] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16112108] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10942595] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 16112108] [evidence IDA]	The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8632896] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 15576473] [evidence IEP]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [pmid 15576473] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 15576473] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9484778] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9484778] [evidence IDA]	N8L; PrLZ; hD52; PC-1; D52	N8L; PrLZ; hD52; PC-1; D52
Homo sapiens	RefSeq	NM_145652.2	ILMN_3350	WFDC5	NM_145652.2	NM_145652.2		149708	23238241	NM_145652.2	WFDC5	NP_663627.1	ILMN_1744923	0001580593	S	473	TCTGCACCTAAGCTGGGGACCAACGGAAAGAGTTCACGATGGGAGGCCTG	20	-	43738578-43738627	20q13.12b	Homo sapiens WAP four-disulfide core domain 5 (WFDC5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	WAP1; dJ211D12.5; PRG5	WAP1; dJ211D12.5; PRG5
Homo sapiens	RefSeq	NM_145652.2	ILMN_3350	WFDC5	NM_145652.2	NM_145652.2		149708	23238241	NM_145652.2	WFDC5	NP_663627.1	ILMN_2079042	0006940598	S	759	CCTCCACCAAAAATGCCCAATTCAGGCAGACCCTGACCTCTCCCTCAGGC	20	-	43738292-43738341	20q13.12b	Homo sapiens WAP four-disulfide core domain 5 (WFDC5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	WAP1; dJ211D12.5; PRG5	WAP1; dJ211D12.5; PRG5
Homo sapiens	RefSeq	NM_002426.2	ILMN_1504	MMP12	NM_002426.2	NM_002426.2		4321	73858571	NM_002426.2	MMP12	NP_002417.2	ILMN_1768035	0004780209	S	1018	TGGCCAACCTTGCCATCTGGCATTGAAGCTGCTTATGAAATTGAAGCCAG	11	-	102242277-102242326	11q22.2b	Homo sapiens matrix metallopeptidase 12 (macrophage elastase) (MMP12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 8226919] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 8226919] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8226919] [evidence TAS]	MME; HME	MME; HME
Homo sapiens	RefSeq	XM_941364.1	ILMN_39512	LOC652049	XM_941364.1	XM_941364.1		652049	89067134	XM_941364.1	LOC652049	XP_946457.1	ILMN_1693195	0000540348	S	3	GTCTGCACACAAAAAATCCCTTTGGACGATTGAACCCAATGAAGGCATGG					PREDICTED: Homo sapiens similar to hydrocephalus inducing (LOC652049), mRNA.					
Homo sapiens	RefSeq	XM_928861.1	ILMN_45989	LOC645888	XM_928861.1	XM_928861.1		645888	89027872	XM_928861.1	LOC645888	XP_933954.1	ILMN_1715318	0004390682	S	658	TGGCATCGGCGGTTGAGCCAAATGGGGACTTGTGGTGCAAGCAACGCTCC	8	+	7928315-7928364		PREDICTED: Homo sapiens hypothetical protein LOC645888 (LOC645888), mRNA.					
Homo sapiens	RefSeq	NM_183416.2	ILMN_1253	KIF1B	NM_183416.2	NM_183416.2		23095	41393558	NM_183416.2	KIF1B	NP_904325.2	ILMN_1743034	0005490743	I	5646	GCCCAGGTTGGAAATGGAGCAGGCCAAAACTCCCAGGCTGATCAGTAATG	1	+	10289291-10289340	1p36.22c	Homo sapiens kinesin family member 1B (KIF1B), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence ISS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence ISS]; The process of communication from a neuron to another neuron across a synapse [goid 7270] [evidence ISS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence ISS]; The directed movement of organelles or molecules along microtubules from the cell body toward the cell periphery in nerve cell axons [goid 8089] [evidence ISS]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16225668] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence ISS]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [pmid 10341097] [evidence TAS]	KIAA0591; HMSNII; CMT2; KIAA1448; CMT2A; MGC134844; KLP; FLJ23699; CMT2A1	KIAA0591; HMSNII; CMT2; KIAA1448; CMT2A; MGC134844; KLP; FLJ23699; CMT2A1
Homo sapiens	RefSeq	NM_005883.2	ILMN_175562	APC2	NM_005883.2	NM_005883.2		10297	57242791	NM_005883.2	APC2	NP_005874.1	ILMN_1659950	0004180358	S	9879	CATGGTCCTCCCGAGCTCCGACAGCATTACCTCACCCGGCCCCATCTGTT	19	+	1423971-1424020	19p13.3h	Homo sapiens adenomatosis polyposis coli 2 (APC2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Complex of peripheral cytoplasmic proteins (alpha-, beta- and gamma-catenin) that interact with the cytoplasmic region of uvomorulin/E-cadherin to connect it to the actin cytoskeleton [goid 16342] [pmid 9823329] [evidence IDA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9823329] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9823329] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [pmid 9823329] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]	APCL	APCL
Homo sapiens	RefSeq	NM_006459.2	ILMN_18502	ERLIN1	NM_006459.2	NM_006459.2		10613	24431956	NM_006459.2	ERLIN1	NP_006450.1	ILMN_1730731	0006110634	S	2851	TGTTGCCCCAAAGTGATGGCCCTGGAGGCGGGGCTGAGGAACAGGGAAAT	10	-	101900044-101900093	10q24.2c	Homo sapiens ER lipid raft associated 1 (ERLIN1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 16835267] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KE04; Erlin-1; KEO4; RP11-316M21.1; SPFH1; C10orf69	KE04; Erlin-1; KEO4; RP11-316M21.1; SPFH1; C10orf69
Homo sapiens	Unigene	Hs.127874	ILMN_76502	HS.127874	Hs.127874		Hs.127874		5395643	AI809077			ILMN_1910784	0004150435	S	467	GAAATATAGCCCAGGAAGCCTCTTACACCCTTTCCAGACACACCATTCTG	5	-	173321068-173321117		wf68b04.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2360719 3, mRNA sequence					
Homo sapiens	RefSeq	XM_378549.3	ILMN_37006	LOC91948	XM_378549.3	XM_378549.3		91948	89039323	XM_378549.3	LOC91948	XP_378549.1	ILMN_1815218	0002490768	S	1510	TGCATGCCTGGTTCCTTCCCATCATGTAGGTCTTCTGGTCAAGTACCCCC				15q26.2d	PREDICTED: Homo sapiens hypothetical protein LOC91948 (LOC91948), mRNA.					
Homo sapiens	RefSeq	XM_001715259.1	ILMN_342839	LOC100133947	XM_001715259.1	XM_001715259.1		100133947	169206329	XM_001715259.1	LOC100133947	XP_001715311.1	ILMN_3241931	0003440561	S	575	TTGCTCAGCTCCCAACAGATGAAGCAATTGGCCGCAGCAGTGCACCAGGG					PREDICTED: Homo sapiens similar to hCG1795283 (LOC100133947), mRNA.					
Homo sapiens	RefSeq	NM_003049.1	ILMN_9108	SLC10A1	NM_003049.2	NM_003049.2		6554	142374844	NM_003049.2	SLC10A1	NP_003040.1	ILMN_1776112	0006350438	S	1264	CATCAAGTCTTGGCCGGGAACACAGACAGGGTGTCTACCCAAGAAGCCTC	14	-	69312570-69312619	14q24.2a	Homo sapiens solute carrier family 10 (sodium/bile acid cotransporter family), member 1 (SLC10A1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8132774] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8132774] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [pmid 8132774] [evidence EXP]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [pmid 8132774] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NTCP1; NTCP	NTCP1; NTCP
Homo sapiens	RefSeq	XM_927347.1	ILMN_32698	LOC644136	XM_927347.1	XM_927347.1		644136	88942314	XM_927347.1	LOC644136	XP_932440.1	ILMN_1714831	0004880088	S	305	GGAGCACGAGGTGCAAAGTCAACAAAAAGTCCTGCTCAGACTTGCAAGGA	1	-	1868877-1868917:1875496-1875504		PREDICTED: Homo sapiens hypothetical protein LOC644136 (LOC644136), mRNA.					
Homo sapiens	RefSeq	NM_019597.3	ILMN_173173	HNRNPH2	NM_019597.3	NM_019597.3		3188	74099695	NM_019597.3	HNRNPH2	NP_062543.1	ILMN_2362245	0003180678	A	1361	GGGAGGGATGGGCTTATCCAACCAGTCTAGTTATGGAGGTCCTGCTAGCC	X	+	100554823-100554872	Xq22.1c	Homo sapiens heterogeneous nuclear ribonucleoprotein H2 (H') (HNRNPH2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7499401] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 7499401] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7499401] [evidence TAS]	HNRPH'; FTP3; hnRNPH'	HNRPH'; FTP3; hnRNPH'
Homo sapiens	Unigene	Hs.353831	ILMN_87267	HS.353831	Hs.353831		Hs.353831		18993602	BM683706			ILMN_1821915	0005570709	S	407	CCTGAGGCCAATGAGGACAGCTTCACGGAGATGCAATGGTCCTGCACAGC	18	-	75246935-75246984		UI-E-EJ1-ajh-m-02-0-UI.s1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajh-m-02-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.400256	ILMN_89562	HS.400256	Hs.400256		Hs.400256		21749338	AK091057			ILMN_1903021	0001980204	S	1876	CGCCCACTGAATCATCATGCACTGACCGAAATGCCACCTGTATGAGTGCT	4	-	8408077-8408126		Homo sapiens cDNA FLJ33738 fis, clone BRAWH2018527					
Homo sapiens	RefSeq	NM_017886.2	ILMN_309538	ULK4	NM_017886.2	NM_017886.2		54986	151301203	NM_017886.2	ULK4	NP_060356.2	ILMN_3236866	0004610703	S	4079	GCATAAGCAAGGTCAGCTCCCAGACACCTTTGCCACATCCCCTCACAGCT	3	-	41841671-41841720	3p22.1b	Homo sapiens unc-51-like kinase 4 (C. elegans) (ULK4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	REC01035; FAM7C1; FLJ20574; DKFZp434E1822	FLJ20574; DKFZp434E1822; REC01035; FAM7C1
Homo sapiens	RefSeq	NM_002032.2	ILMN_11546	FTH1	NM_002032.2	NM_002032.2		2495	56682958	NM_002032.2	FTH1	NP_002023.2	ILMN_1683146	0005220240	S	956	GTCTTTGAGGTCTTGGGATGAATCAGAAATCTATCCAGGCTATCTTCCAG	11	-	61731980-61732029	11q12.3a	Homo sapiens ferritin, heavy polypeptide 1 (FTH1), mRNA.	A iron-storing protein complex, which in humans has 24 subunits. There are two different ferritin subunits, the L (light) chain and H (heavy) chain [goid 8043] [pmid 6589621] [evidence TAS]	The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The process of binding or confining iron ions in an intracellular area such that they are separated from other components of a biological system [goid 6880] [pmid 9924025] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O [goid 4322] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC104426; FTHL6; PIG15; PLIF; FTH	MGC104426; FTHL6; PIG15; PLIF; FTH
Homo sapiens	RefSeq	NM_130773.2	ILMN_179746	CNTNAP5	NM_130773.2	NM_130773.2		129684	20544138	NM_130773.2	CNTNAP5	NP_570129.1	ILMN_1710394	0001580243	I	4934	CTTACCACTCTCTCCTGGGGCCGACACGTTGGGACAGCACACCATAGCAT	2	+	125264081-125264130	2q14.3b-q14.3c	Homo sapiens contactin associated protein-like 5 (CNTNAP5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	FLJ31966; caspr5	FLJ31966; caspr5
Homo sapiens	RefSeq	NR_031717.1	ILMN_388638	MIR1471	NR_031717.1	NR_031717.1		100302126	269847574	NR_031717.1	MIR1471		ILMN_3308627	0003520731	S	3	CGCGTGTGGAGCCAGGTGTAGAGGCGGAGCACAGCTGGCTCTAATTTGAG					Homo sapiens microRNA 1471 (MIR1471), microRNA.					
Homo sapiens	RefSeq	XM_941670.1	ILMN_35304	LOC652260	XM_941670.1	XM_941670.1		652260	89062574	XM_941670.1	LOC652260	XP_946763.1	ILMN_1805083	0004250242	S	1	ATGCAGGGGTTGTCCGAGGTCCACTGTGGGGTGGTGGCAAAGTTTCCTAG					PREDICTED: Homo sapiens similar to opposite strand transcription unit to Stag3 (LOC652260), mRNA.					
Homo sapiens	RefSeq	XM_934475.1	ILMN_32091	LOC653419	XM_934475.1	XM_934475.1		653419	89042192	XM_934475.1	LOC653419	XP_939568.1	ILMN_1712715	0001190646	I	2	CTCCGCCCGATCGGCCAGGGCTGGGGGCGCTGGGGGCGCTACGGGCGCGG	17	+	146473-146522		PREDICTED: Homo sapiens similar to preproneuropeptide B, transcript variant 5 (LOC653419), mRNA.					
Homo sapiens	RefSeq	NM_198483.1	ILMN_22025	RUFY4	NM_198483.1	NM_198483.1		285180	38348281	NM_198483.1	RUFY4	NP_940885.1	ILMN_1678627	0002640491	S	3347	GGATAAGACCCCAGCAGCCCTGACATTTCTCCTCCACACTCCCCACTCAC	2	+	218663328-218663377	2q35e	Homo sapiens RUN and FYVE domain containing 4 (RUFY4), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ46536	FLJ46536
Homo sapiens	RefSeq	NM_012230.2	ILMN_20032	POMZP3	NM_152992.2	NM_152992.2		22932	111160589	NM_152992.2	POMZP3	NP_694537.1	ILMN_1709800	0006290678	A	948	CCTTGATGGCCAGGAAAATAAAAGAAGCTGTCTTGTCGACGGTCTCACTG	7	-	76247594-76247617:76254839-76254864	7q11.23f	Homo sapiens POM (POM121 homolog, rat) and ZP3 fusion (POMZP3), transcript variant 2, mRNA.				POM-ZP3; MGC8359; POM121	POM121; POM-ZP3; MGC8359
Homo sapiens	RefSeq	NM_001092.3	ILMN_23502	ABR	NM_001092.3	NM_001092.3		29	38679953	NM_001092.3	ABR	NP_001083.2	ILMN_1655114	0005860431	I	20	GAGGAGGAAGAGGAGGCGATAGGCTTGCTGGACAAGGTTCTGGAGGACGA	17	-	1012255-1012304	17p13.3f-p13.3e	Homo sapiens active BCR-related gene (ABR), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 8262969] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 8262969] [evidence TAS]	MDB; FLJ45954	MDB; FLJ45954
Homo sapiens	RefSeq	NM_021962.2	ILMN_23502	ABR	NM_001092.3	NM_001092.3		29	38679953	NM_001092.3	ABR	NP_001083.2	ILMN_1672878	0000620240	A	4814	AAACGCCAGGTCTGCCTGTTCTTGCTGGGCAATGGCTGATGGCTGCCAGT	17	-	908332-908381	17p13.3f-p13.3e	Homo sapiens active BCR-related gene (ABR), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 8262969] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 8262969] [evidence TAS]	MDB; FLJ45954	MDB; FLJ45954
Homo sapiens	RefSeq	NM_000823.2	ILMN_2373	GHRHR	NM_000823.2	NM_000823.2		2692	58530850	NM_000823.2	GHRHR	NP_000814.2	ILMN_1740186	0005340730	I	1340	GGAGTCCACACTTGAATTTGGGCAGCTACCACGGGTCTGCCATGCTCTGG	7	+	30985404-30985453	7p15.1a	Homo sapiens growth hormone releasing hormone receptor (GHRHR), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10962031] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10962031] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9482665] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7680413] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7680413] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence NAS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10084571] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 7680413] [evidence TAS]; The secretion of milk by the mammary gland [goid 7595] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IEA]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of any steroid hormone receptor signaling pathway [goid 33143] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IEA]; Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43567] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60124] [evidence IEA]; The process whose specific outcome is the progression of a somatotropin secreting cell over time, from its formation to the mature structure. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60133] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [pmid 10962031] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [pmid 10962031] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 7680413] [evidence TAS];  [goid 4999] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IEA]	GRFR; GHRFR; GHRHRpsv	GRFR; GHRFR; GHRHRpsv
Homo sapiens	Unigene	Hs.402146	ILMN_89635	HS.402146	Hs.402146		Hs.402146		23239646	BU588364			ILMN_1862737	0002510445	S	58	AGTCCCTGCTCTGTGGAGATGACAGTCTCTTGGGGAAAACAGACAATAAC	1	+	151791377-151791426		AGENCOURT_8911223 NIH_MGC_141 Homo sapiens cDNA clone IMAGE:6386615 5, mRNA sequence					
Homo sapiens	RefSeq	NM_005763.2	ILMN_18079	AASS	NM_005763.2	NM_005763.2		10157	13027639	NM_005763.2	AASS	NP_005754.2	ILMN_2157219	0001500465	S	2776	GGCCTAATGGGGCCCTTTTCAAAGGAGATCTATGGACCAATATTGGAGCG	7	-	121503830-121503879	7q31.32a	Homo sapiens aminoadipate-semialdehyde synthase (AASS), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10567240] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid [goid 6554] [pmid 10775527] [evidence NAS]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [pmid 10567240] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N6-(L-1,3-dicarboxypropyl)-L-lysine + NADP+ + H2O = L-lysine + 2-oxoglutarate + NADPH + H+ [goid 47130] [evidence IEA]; Catalysis of the reaction: 6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-glutamate + 2-aminoadipate 6-semialdehyde + NADH + H+ [goid 47131] [pmid 10775527] [evidence NAS]	LORSDH; LKR/SDH; LKRSDH	LORSDH; LKR/SDH; LKRSDH
Homo sapiens	RefSeq	NM_005763.2	ILMN_18079	AASS	NM_005763.2	NM_005763.2		10157	13027639	NM_005763.2	AASS	NP_005754.2	ILMN_1678323	0000060280	S	2714	CCGTGGGGTTACCCACCGCCATGGCAGCCAAAATGTTGCTTGATGGTGAA	7	-	121503892-121503897:121505128-121505171	7q31.32a	Homo sapiens aminoadipate-semialdehyde synthase (AASS), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10567240] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of lysine, 2,6-diaminohexanoic acid [goid 6554] [pmid 10775527] [evidence NAS]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [pmid 10567240] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N6-(L-1,3-dicarboxypropyl)-L-lysine + NADP+ + H2O = L-lysine + 2-oxoglutarate + NADPH + H+ [goid 47130] [evidence IEA]; Catalysis of the reaction: 6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-glutamate + 2-aminoadipate 6-semialdehyde + NADH + H+ [goid 47131] [pmid 10775527] [evidence NAS]	LORSDH; LKR/SDH; LKRSDH	LORSDH; LKR/SDH; LKRSDH
Homo sapiens	RefSeq	XM_291277.4	ILMN_40918	DKFZP761P0423	XM_291277.4	XM_291277.4		157285	89027874	XM_291277.4	DKFZp761P0423	XP_291277.2	ILMN_1757872	0003370242	A	4242	TCCCTGCCTAACCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCT	8	-	8213003-8213052	8p23.1e	PREDICTED: Homo sapiens hypothetical protein DKFZp761P0423 (DKFZp761P0423), mRNA.					
Homo sapiens	RefSeq	XM_927334.1	ILMN_163560	LOC648794	XR_018412.1	XR_018412.1		648794	113423103	XR_018412.1	LOC648794		ILMN_1693109	0002970274	S	1070	CCATTCAGCAGGTTTCGACTGAAAACTACAGCATTCAACCTGCTATGGAA					PREDICTED: Homo sapiens similar to laminin receptor 1 (ribosomal protein SA) (LOC648794), mRNA.					
Homo sapiens	RefSeq	XM_001718663.1	ILMN_339987	LOC100133178	XM_001718663.1	XM_001718663.1		100133178	169162688	XM_001718663.1	LOC100133178	XP_001718715.1	ILMN_3239588	0000240398	S	623	GATCTGCGCCTAATGGTTGGGCCACCCGCCAGAGCCACTCATGCCAGCAA	1	-	159690543-159690592	1q23.3a	PREDICTED: Homo sapiens hypothetical protein LOC100133178 (LOC100133178), mRNA.					
Homo sapiens	RefSeq	NM_006572.3	ILMN_173569	GNA13	NM_006572.3	NM_006572.3		10672	31343475	NM_006572.3	GNA13	NP_006563.2	ILMN_1758906	0003800730	S	4158	GAGAAGGTCCTCTGGTTAGTCTCTCAAATTGAGGCTGTTTAGGGAAATCC	17	-	60437806-60437855	17q24.1a	Homo sapiens guanine nucleotide binding protein (G protein), alpha 13 (GNA13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 8999798] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7791744] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 7791744] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10026210] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	MGC46138; G13	MGC46138; G13
Homo sapiens	RefSeq	NM_006572.3	ILMN_173569	GNA13	NM_006572.3	NM_006572.3		10672	31343475	NM_006572.3	GNA13	NP_006563.2	ILMN_2176037	0006650161	S	4553	CCCCAAACTAAGCCATTTGAAACAAGATTCTCTCCATTGCAGTTTGTAGC	17	-	60437411-60437460	17q24.1a	Homo sapiens guanine nucleotide binding protein (G protein), alpha 13 (GNA13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 8999798] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7791744] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 7791744] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10026210] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	MGC46138; G13	MGC46138; G13
Homo sapiens	RefSeq	NM_032305.1	ILMN_23668	POLR3GL	NM_032305.1	NM_032305.1		84265	14150063	NM_032305.1	POLR3GL	NP_115681.1	ILMN_1760667	0005490703	S	1020	GAAGAACTGGGGTTGTTAGAGCTGAGATGACTGTACACATACCCCTGCCC	1	-	145456331-145456380	1q21.1b	Homo sapiens polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like (POLR3GL), mRNA.				MGC3200; FLJ34890; flj32422	MGC3200; FLJ34890; flj32422
Homo sapiens	RefSeq	XM_936275.3	ILMN_45039	FTHL19	XM_936275.3	XM_936275.3		389844	169216209	XM_936275.3	FTHL19	XP_941368.3	ILMN_3233968	0002260097	I	763	CTCCTCTCAGTTTGACCATTGTTAACAATAAAGTTATCTGTTCTCAAAGC				Xp21.1a	PREDICTED: Homo sapiens ferritin, heavy polypeptide-like 19 (FTHL19), mRNA.		The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	RefSeq	NM_019105.5	ILMN_11447	TNXB	NM_019105.5	NM_019105.5		7148	67782335	NM_019105.5	TNXB	NP_061978.5	ILMN_1708615	0004070360	A	11001	TGAAGAGCCCCGCCTAGGAGTGCTGACCGTGACCGACACAACCCCAGACT	6	-	32120976-32121025	6p21.32b	Homo sapiens tenascin XB (TNXB), transcript variant XB, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 7686164] [evidence NAS]; Any collagen polymer in which collagen triple helices associate to form fibrils [goid 5583] [pmid 16278880] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 15102077] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways involving triacylglycerol, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triacylglycerols are important components of plant oils, animal fats and animal plasma lipoproteins [goid 6641] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IEA]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [evidence IEA]; The chemical reactions and pathways involving collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 32963] [pmid 15102077] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of fibrils, extracellular matrix material consisting of polysaccharides and protein [goid 43206] [evidence IEA]; Any process that modulates the frequency, rate or extent of JUN kinase activity [goid 43506] [evidence IEA]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [pmid 15102077] [evidence IMP]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence ISS]; Interacting selectively with collagen, a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals. Collagen is highly enriched in glycine (some regions are 33% glycine) and proline, occurring predominantly as 3-hydroxyproline (about 20%) [goid 5518] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence ISS]	XB; TNX; TNXBS; HXBL; TENX; TNXB1; TNXB2; XBS	XB; TNX; TNXBS; HXBL; TENX; TNXB1; TNXB2; XBS
Homo sapiens	RefSeq	NM_031313.1	ILMN_23145	ALPPL2	NM_031313.1	NM_031313.1		251	14110398	NM_031313.1	ALPPL2	NP_112603.1	ILMN_1801851	0002490376	S	2172	CCTCTGCTGTCCCTCCACTGGGCTAATTCTACACCCCTGTCGCCTCCTAG	2	+	232983347-232983396	2q37.1c	Homo sapiens alkaline phosphatase, placental-like 2 (ALPPL2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence NAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum [goid 4035] [pmid 2162249] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	GCAP; ALPPL; ALPG	GCAP; ALPPL; ALPG
Homo sapiens	RefSeq	NM_001001570.1	ILMN_27428	PDE9A	NM_001001570.1	NM_001001570.1		5152	48762723	NM_001001570.1	PDE9A	NP_001001570.1	ILMN_1767176	0002260528	I	303	ATCACTCCGTAACTTGTTGTTTTTACCTAGTAAGGAGTCATGGGCGTCCC	21	+	42990615-42990664	21q22.3b	Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9856478] [evidence TAS]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]	HSPDE9A2	HSPDE9A2
Homo sapiens	RefSeq	NM_017454.1	ILMN_23197	STAU1	NM_004602.2	NM_004602.2		6780	82659082	NM_004602.2	STAU1	NP_004593.2	ILMN_1656136	0005670241	A	2744	AACCCAGGACAGTTTCAGTGATGCAAATTGTGTGCCCTCTGGTTCAGCTG	20	-	47730600-47730649	20q13.13c	Homo sapiens staufen, RNA binding protein, homolog 1 (Drosophila) (STAU1), transcript variant T4, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The rough (or granular) endoplasmic reticulum (ER) has ribosomes adhering to the outer surface; the ribosomes are the site of translation of the mRNA for those proteins which are either to be retained within the cisternae (ER-resident proteins), the proteins of the lysosomes, or the proteins destined for export from the cell. Glycoproteins undergo their initial glycosylation within the cisternae [goid 5791] [pmid 10022909] [evidence TAS]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 10022909] [evidence TAS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process by which mRNA is transported to, or maintained in, a specific location within the cell [goid 8298] [evidence IEA]	Interacting selectively with double-stranded RNA [goid 3725] [pmid 10022909] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15680326] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15303970] [evidence IPI]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]	FLJ25010; STAU	
Homo sapiens	RefSeq	XM_001726284.1	ILMN_350312	LOC100134660	XM_001726284.1	XM_001726284.1		100134660	169170373	XM_001726284.1	LOC100134660	XP_001726336.1	ILMN_3247661	0007610750	S	668	CTCCTGCCACCCAGTGGCCTCTTTAGGCCAAGCTCATGCCTCACAAGGGC	7	-	51465939-51465988		PREDICTED: Homo sapiens hypothetical protein LOC100134660 (LOC100134660), mRNA.					
Homo sapiens	RefSeq	NM_014943.3	ILMN_176506	ZHX2	NM_014943.3	NM_014943.3		22882	63079684	NM_014943.3	ZHX2	NP_055758.1	ILMN_2184966	0004390646	S	4223	CCCGTCCCACACTGCCCCCCATTTGAGTACACCGCACAAGTCAAACGCTA	8	+	123986271-123986320	8q24.13b	Homo sapiens zinc fingers and homeoboxes 2 (ZHX2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12741956] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 12741956] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12741956] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12741956] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0854	KIAA0854
Homo sapiens	RefSeq	NM_012204.1	ILMN_7794	GTF3C4	NM_012204.1	NM_012204.1		9329	6912399	NM_012204.1	GTF3C4	NP_036336.1	ILMN_1733964	0001240014	S	2788	AGAGAAGGATGCACTGGAGGAAGCCGGACCCTCACGAGTGGAGAGAAGTC	9	+	134554214-134554263	9q34.13b	Homo sapiens general transcription factor IIIC, polypeptide 4, 90kDa (GTF3C4), mRNA.	A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species [goid 127] [pmid 17409385] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of RNA on a template of DNA [goid 6351] [pmid 17409385] [evidence IC ];  [goid 6384] [pmid 10523658] [evidence TAS]; The synthesis of 5S ribosomal RNA (rRNA), or an equivalent rRNA, from a DNA template [goid 42791] [pmid 17409385] [evidence IC ]; The synthesis of transfer RNA (tRNA) from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III promoter [goid 42797] [pmid 17409385] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 17409385] [evidence IC ]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 17409385] [evidence IC ]; Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [pmid 10523658] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17409385] [evidence IPI]; Increases the activity of an enzyme [goid 8047] [pmid 10523658] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC138450; TFIIICdelta; TFiiiC2-90; TFIII90; FLJ21002; TFIIIC90	MGC138450; TFIIICdelta; TFiiiC2-90; TFIII90; FLJ21002; TFIIIC90
Homo sapiens	RefSeq	NM_016937.2	ILMN_181974	POLA1	NM_016937.2	NM_016937.2		5422	106507300	NM_016937.2	POLA1	NP_058633.2	ILMN_2191436	0005810253	S	5171	GTGTTGTATTCAGAAAAACGGGGAGAGGGATGCTTAATTGGCCCTGGCGC	X	+	24749535-24749584	Xp22.11a-p21.3d	Homo sapiens polymerase (DNA directed), alpha 1, catalytic subunit (POLA1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 9815285] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16762037] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 4084590] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 9518481] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7045121] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11473323] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 6693436] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [pmid 2175912] [evidence IDA]; A complex of four polypeptides, comprising large and small DNA polymerase alpha subunits and two primase subunits, which catalyzes the synthesis of an RNA primer on the lagging strand of replicating DNA; the smaller of the two primase subunits alone can catalyze oligoribonucleotide synthesis [goid 5658] [pmid 2243771] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9518481] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 1903085] [evidence IDA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Progression through S phase, the part of the mitotic cell cycle during which DNA synthesis takes place [goid 84] [pmid 16762037] [evidence IDA]; Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 1508673] [evidence IMP]; Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 3335506] [evidence IDA]; Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 1730053] [evidence IMP]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [pmid 2175912] [evidence IDA]; The synthesis of DNA from a template strand in the 5' to 3' direction; leading strand elongation is continuous as it proceeds in the same direction as the replication fork [goid 6272] [pmid 2175912] [evidence IDA]; The synthesis of DNA from a template strand in the 5' to 3' direction; leading strand elongation is continuous as it proceeds in the same direction as the replication fork [goid 6272] [pmid 7910375] [evidence IDA]; The synthesis of DNA from a template strand in a net 3' to 5' direction. Lagging strand DNA elongation proceeds by discontinuous synthesis of short stretches of DNA, known as Okazaki fragments, from RNA primers; these fragments are then joined by DNA ligase. Although each segment of nascent DNA is synthesized in the 5' to 3' direction, the overall direction of lagging strand synthesis is 3' to 5', mirroring the progress of the replication fork [goid 6273] [pmid 2175912] [evidence IDA]; The synthesis of DNA from a template strand in a net 3' to 5' direction. Lagging strand DNA elongation proceeds by discontinuous synthesis of short stretches of DNA, known as Okazaki fragments, from RNA primers; these fragments are then joined by DNA ligase. Although each segment of nascent DNA is synthesized in the 5' to 3' direction, the overall direction of lagging strand synthesis is 3' to 5', mirroring the progress of the replication fork [goid 6273] [pmid 7910375] [evidence IDA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [pmid 11470886] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 3359994] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 3139084] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 16762037] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 3359994] [evidence NAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 16762037] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 4084590] [evidence IMP]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 3359994] [evidence IDA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 893425] [evidence IDA]; Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. Catalyzed by a DNA-directed RNA polymerase that forms a complex with alpha DNA polymerase [goid 3896] [pmid 2175912] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2243771] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9518481] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1311258] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16438930] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9395244] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10518787] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2243771] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10869558] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10518787] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	DKFZp686K1672; POLA	DKFZp686K1672; POLA
Homo sapiens	RefSeq	XM_939496.1	ILMN_138007	FAM18B	XM_939496.1	XM_939496.1		51030	89042480	XM_939496.1	FAM18B	XP_944589.1	ILMN_1691431	0004760050	I	22	CCAGAACAAGGGTTGGCAAACTATGGCCTGCAGACCAAATCCAGCCCGAC				17p11.2f	PREDICTED: Homo sapiens family with sequence similarity 18, member B (FAM18B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_001715808.1	ILMN_347665	LOC100131061	XM_001715808.1	XM_001715808.1		100131061	169209348	XM_001715808.1	LOC100131061	XP_001715860.1	ILMN_3290323	0007550189	M	244	CACCACTCAGAGGAAGAGGAGAGAGCCCCAGGAGGAAAGGGGGACTGTTA				15q26.1c	PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a, 2 (LOC100131061), partial mRNA.					
Homo sapiens	RefSeq	NM_018174.4	ILMN_25174	MAP1S	NM_018174.4	NM_018174.4		55201	50428934	NM_018174.4	MAP1S	NP_060644.4	ILMN_1796336	0000150148	S	3031	CAGGTGACCCTGATCCCCACTTTCGACTCGGTGGCCATGCATACGTGGTA	19	+	17705235-17705237:17706082-17706128	19p13.11d	Homo sapiens microtubule-associated protein 1S (MAP1S), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12762840] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12762840] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 17658481] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 15528209] [evidence ISS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [pmid 17658481] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [pmid 15528209] [evidence ISS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [pmid 17658481] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 12762840] [evidence IDA]	A process that results in a parallel arrangement of microtubules [goid 1578] [pmid 15528209] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 12762840] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 16297881] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 15528209] [evidence ISS]; The directed movement of a mitochondrion along a microtubule, mediated by motor proteins [goid 47497] [pmid 12762840] [evidence TAS]; The process by which the anatomical structures of neurites are generated and organized. Morphogenesis pertains to the creation of form. A neurite is any process extending from a neural cell, such as axons or dendrites [goid 48812] [pmid 15528209] [evidence IEP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 15907802] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [pmid 15907802] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 15528209] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 12762840] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [pmid 12762840] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 15528209] [evidence IDA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 12762840] [evidence IDA]	VCY2IP-1; C19orf5; VCY2IP1; BPY2IP1; FLJ10669; MAP8; MGC133087	VCY2IP-1; C19orf5; VCY2IP1; BPY2IP1; FLJ10669; MAP8; MGC133087
Homo sapiens	RefSeq	NM_014501.2	ILMN_7444	UBE2S	NM_014501.2	NM_014501.2		27338	112382376	NM_014501.2	UBE2S	NP_055316.2	ILMN_2217289	0006620634	S	61	AAAACCAAGGAACGTGCGCGCTGACGTCACGGTTGAGGCTCGGAGCTGAG	19	-	60611027-60611076	19q13.42b	Homo sapiens ubiquitin-conjugating enzyme E2S (UBE2S), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	E2EPF; E2-EPF; EPF5	E2-EPF
Homo sapiens	RefSeq	NM_021619.2	ILMN_22084	PRDM12	NM_021619.2	NM_021619.2		59335	15042948	NM_021619.2	PRDM12	NP_067632.2	ILMN_1692758	0006580619	S	2048	AGGAGGGCAAGACTGGAACCGCTGCCCGAGAGGTTAAGGTGGCTTCTGTG	9	+	132547761-132547810	9q34.12a	Homo sapiens PR domain containing 12 (PRDM12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PFM9	PFM9
Homo sapiens	RefSeq	XM_942877.1	ILMN_171512	LOC647520	XM_001132193.1	XM_001132193.1		647520	113425317	XM_001132193.1	LOC647520	XP_001132193.1	ILMN_1767546	0004920196	S	1119	AGTTTCTGGGGGTTTTCCGCACCACCGATGCGAGCTCCTTGCTGGGTCGC	15	+	73534268-73534317	15q24.2a	PREDICTED: Homo sapiens hypothetical LOC647520 (LOC647520), mRNA.					
Homo sapiens	RefSeq	NM_016630.3	ILMN_9070	SPG21	NM_016630.3	NM_016630.3		51324	42544234	NM_016630.3	SPG21	NP_057714.1	ILMN_1733560	0000050754	I	91	GCCTCCCGCACGCACCGCGCAGCCTGCTGTGCCCGTGGGTCCCGAGTGCT	15	-	65282111-65282160	15q22.31b	Homo sapiens spastic paraplegia 21 (autosomal recessive, Mast syndrome) (SPG21), transcript variant 1, mRNA. XM_945612 XM_945613 XM_945615 XM_945617 XM_945619 XM_945622	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11113139] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [pmid 11113139] [evidence IDA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISS]	A series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell [goid 50851] [pmid 11113139] [evidence IC ]	Interacting selectively with a CD4, a receptor found on the surface of T cells, monocytes and macrophages [goid 42609] [evidence ISS]; Interacting selectively with a CD4, a receptor found on the surface of T cells, monocytes and macrophages [goid 42609] [pmid 11113139] [evidence IPI]	BM-019; GL010; ACP33; MAST	ACP33; MAST; BM-019; GL010
Homo sapiens	RefSeq	XM_945608.1	ILMN_9070	SPG21	NM_016630.3	NM_016630.3		51324	42544234	NM_016630.3	SPG21	NP_057714.1	ILMN_1657423	0007200403	A	388	CCCCGAAGTATCAGGTGTCCTCTCATATTCCTGCCCCCTGTCAGTGGAAC	15	-	65273262-65273311	15q22.31b	Homo sapiens spastic paraplegia 21 (autosomal recessive, Mast syndrome) (SPG21), transcript variant 1, mRNA. XM_945612 XM_945613 XM_945615 XM_945617 XM_945619 XM_945622	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11113139] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [pmid 11113139] [evidence IDA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISS]	A series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell [goid 50851] [pmid 11113139] [evidence IC ]	Interacting selectively with a CD4, a receptor found on the surface of T cells, monocytes and macrophages [goid 42609] [evidence ISS]; Interacting selectively with a CD4, a receptor found on the surface of T cells, monocytes and macrophages [goid 42609] [pmid 11113139] [evidence IPI]	BM-019; GL010; ACP33; MAST	
Homo sapiens	RefSeq	XM_001718481.1	ILMN_342290	LOC730883	XM_001718481.1	XM_001718481.1		730883	169201701	XM_001718481.1	LOC730883	XP_001718533.1	ILMN_3301343	0004230670	M	269	TGGGAATCTTCGGTGCGCCAAGTCTGTTCGCCGCCGGGGTCTATCACCCC					PREDICTED: Homo sapiens hypothetical LOC730883 (LOC730883), mRNA.					
Homo sapiens	RefSeq	NM_015953.3	ILMN_12830	NOSIP	NM_015953.3	NM_015953.3		51070	34147607	NM_015953.3	NOSIP	NP_057037.1	ILMN_1759436	0006180408	S	876	TCTGGGGCTGTGGTCACCCTCGAATGCGTGGAGAAGCTGATTCGGAAGGA	19	-	54751446-54751494:54751618-54751618	19q13.33b	Homo sapiens nitric oxide synthase interacting protein (NOSIP), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15548660] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15548660] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11149895] [evidence EXP]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; Any process that stops or reduces the activity of an enzyme [goid 43086] [pmid 11149895] [evidence IDA]; Any process that stops or reduces the activity of the enzyme nitric-oxide synthase [goid 51001] [pmid 11149895] [evidence IDA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11149895] [evidence IPI]	CGI-25	CGI-25
Homo sapiens	RefSeq	NM_018638.3	ILMN_36758	ETNK1	NM_018638.4	NM_018638.4		55500	87298841	NM_018638.4	ETNK1	NP_061108.2	ILMN_1696028	0003890543	S	1686	GCACGATTCTGTGACTGTTTTTCTCTGTTTCACGTTCGTTGAGTGTAAGC	12	+	22729460-22729509	12p12.1d	Homo sapiens ethanolamine kinase 1 (ETNK1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The chemical reactions and pathways resulting in the formation of phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 6646] [pmid 11044454] [evidence IDA]	Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [pmid 11044454] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	EKI1; EKI; Nbla10396	EKI1; EKI
Homo sapiens	RefSeq	XM_928138.1	ILMN_36758	ETNK1	NM_018638.4	NM_018638.4		55500	87298841	NM_018638.4	ETNK1	NP_061108.2	ILMN_1686937	0007380746	S	5178	GTGGTAAAGCAGCTTCATCTTTCAAAATTGATTTGCTCTGGTTTTTCTTT	12	+	22732952-22733001	12p12.1d	Homo sapiens ethanolamine kinase 1 (ETNK1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The chemical reactions and pathways resulting in the formation of phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine [goid 6646] [pmid 11044454] [evidence IDA]	Catalysis of the reaction: ATP + ethanolamine = ADP + O-phosphoethanolamine [goid 4305] [pmid 11044454] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	EKI1; EKI; Nbla10396	
Homo sapiens	RefSeq	NM_020465.2	ILMN_17722	NDRG4	NM_020465.2	NM_020465.2		65009	50233802	NM_020465.2	NDRG4	NP_065198.1	ILMN_2379063	0000050731	A	2500	AACGGGAGAGAGCAGTGAAAACATGCAGGGCTGTGGACGGGGGAAGGGTT	16	+	57104257-57104306	16q21a	Homo sapiens NDRG family member 4 (NDRG4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11352569] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 11352569] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 11352569] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 11352569] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 11978393] [evidence NAS]		FLJ42011; MGC19632; SMAP-8; KIAA1180; FLJ30586; DKFZp686I1615	FLJ42011; MGC19632; SMAP-8; KIAA1180; FLJ30586; DKFZp686I1615
Homo sapiens	RefSeq	NM_020465.2	ILMN_17722	NDRG4	NM_020465.2	NM_020465.2		65009	50233802	NM_020465.2	NDRG4	NP_065198.1	ILMN_1754105	0001440253	I	36	GCCGAAGCCCCGCTCCCCGCCTGCGCGTCTGTCTCGTCCGCATCTCCGCG	16	+	57055153-57055202	16q21a	Homo sapiens NDRG family member 4 (NDRG4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11352569] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 11352569] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 11352569] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 11352569] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 11978393] [evidence NAS]		FLJ42011; MGC19632; SMAP-8; KIAA1180; FLJ30586; DKFZp686I1615	FLJ42011; MGC19632; SMAP-8; KIAA1180; FLJ30586; DKFZp686I1615
Homo sapiens	RefSeq	NM_020465.2	ILMN_17722	NDRG4	NM_020465.2	NM_020465.2		65009	50233802	NM_020465.2	NDRG4	NP_065198.1	ILMN_1690283	0002100433	I	35	CGCCGAAGCCCCGCTCCCCGCCTGCGCGTCTGTCTCGTCCGCATCTCCGC	16	+	57055152-57055201	16q21a	Homo sapiens NDRG family member 4 (NDRG4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11352569] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 11352569] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 11352569] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 11352569] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 11978393] [evidence NAS]		FLJ42011; MGC19632; SMAP-8; KIAA1180; FLJ30586; DKFZp686I1615	FLJ42011; MGC19632; SMAP-8; KIAA1180; FLJ30586; DKFZp686I1615
Homo sapiens	RefSeq	XM_938534.1	ILMN_42504	LOC649456	XM_938534.1	XM_938534.1		649456	89061512	XM_938534.1	LOC649456	XP_943627.1	ILMN_1705759	0000580110	S	491	CCCTGAGGACTGAAGAGATTCTTGGAGAGCCATCTGGTGTATGTCATGGG					PREDICTED: Homo sapiens similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (LOC649456), mRNA.					
Homo sapiens	RefSeq	NM_032421.1	ILMN_14847	CYLN2	NM_032421.1	NM_032421.1		7461	14702161	NM_032421.1	CYLN2	NP_115797.1	ILMN_1811682	0000580148	A	5156	GCCCCATCGGTAGGGGCACCGATTAGTCTACTAACAGCCAGAGGTCCATC	7	+	73457907-73457956	7q11.23b-q11.23c	Homo sapiens cytoplasmic linker 2 (CYLN2), transcript variant 2, mRNA.				CLIP-115; WSCR4; MGC11333; KIAA0291; CLIP2; WBSCR4; CLIP	CLIP-115; WSCR4; MGC11333; KIAA0291; CLIP2; WBSCR4; CLIP
Homo sapiens	RefSeq	NR_002808.1	ILMN_14639	C14ORF85	NR_002808.1	NR_002808.1		319085	84872088	NR_002808.1	C14orf85		ILMN_2134381	0000360373	S	4549	ATAAACTTAATTAGGCCAGGCGCAGTGGTTCACGCCTGTAATCCCAGCAC	14	+	92608098-92608147	14q32.12b	Homo sapiens chromosome 14 open reading frame 85 (C14orf85), non-coding RNA.					
Homo sapiens	RefSeq	NM_014455.2	ILMN_366427	RNF115	NM_014455.2	NM_014455.2		27246	201860301	NM_014455.2	RNF115	NP_055270.1	ILMN_3247728	0001090452	S	1014	GAGCTTAAATGGTGAGGACTCTACTCGGCAAAGCCAGAGCACTGAGGCCT	1	+	145688115-145688164	1q21.1b	Homo sapiens ring finger protein 115 (RNF115), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	Unigene	Hs.547985	ILMN_109721	HS.547985	Hs.547985		Hs.547985		5865555	AW016798			ILMN_1817113	0003800100	S	308	TTGCAGAGGGATAGGGAGTGAGGGTGGGAAGGTGCCACGAACTGAGCTTG	15	-	94674317-94674366		UI-H-BI0p-abm-h-10-0-UI.s1 NCI_CGAP_Sub2 Homo sapiens cDNA clone IMAGE:2712450 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014890.1	ILMN_28977	FILIP1L	NM_014890.2	NM_014890.2		11259	109659848	NM_014890.2	FILIP1L	NP_055705.2	ILMN_1738578	0000110307	I	2925	CTGACCACGCTCACCCTCATCCAGTCCATACTGATATTTTTGCAAGGAAC	3	-	101049761-101049807:101049808-101049810	3q12.1c	Homo sapiens filamin A interacting protein 1-like (FILIP1L), transcript variant 2, mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DOC-1; GIP90; DOC1	GIP90
Homo sapiens	RefSeq	NM_002188.2	ILMN_20937	IL13	NM_002188.2	NM_002188.2		3596	26787977	NM_002188.2	IL13	NP_002179.2	ILMN_2052511	0002320017	S	938	CAAGGGTTCAGAGACTCAGGGCCCCAGCACTAAAGCAGTGGACACCAGGA	5	+	131996457-131996506	5q31.1b	Homo sapiens interleukin 13 (IL13), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9177784] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 10725748] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 8096327] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10725748] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10725748] [evidence IC ]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10725748] [evidence NAS]; Interacting selectively with the interleukin-13 receptor [goid 5144] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18243101] [evidence IPI]	P600; IL-13; MGC116789; MGC116788; BHR1; ALRH; MGC116786	P600; IL-13; MGC116789; BHR1; ALRH; MGC116788; MGC116786
Homo sapiens	RefSeq	NM_020734.1	ILMN_19439	FAM80B	NM_020734.1	NM_020734.1		57494	57977280	NM_020734.1	FAM80B	NP_065785.1	ILMN_1681757	0006960333	S	1205	GTAAATGCACCGGTTTGGATTCAGGCACAGCCCCAGTCTGCCTACAGCAG	12	+	8821630-8821665:8824438-8824451	12p13.31b	Homo sapiens family with sequence similarity 80, member B (FAM80B), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1238	KIAA1238
Homo sapiens	RefSeq	XM_498389.2	ILMN_31003	LOC139587	XM_498389.2	XM_498389.2		139587	89060240	XM_498389.2	LOC139587	XP_498389.2	ILMN_1717377	0000450593	S	888	TCTGGCCACGAGTACGAGGGATCTGTATGACACCGCCACTCACAATGTCC	X	-	134636633-134636657:134637287-134637311	Xq26.3b	PREDICTED: Homo sapiens similar to sarcoma antigen 1 (LOC139587), mRNA.					
Homo sapiens	RefSeq	NM_001018113.1	ILMN_1150	FANCB	NM_001018113.1	NM_001018113.1		2187	66528784	NM_001018113.1	FANCB	NP_001018123.1	ILMN_1726756	0001170528	I	127	CTGATGAAGCTGAAACTACTTTGTGATGCCTATTGTCCCAGATCTTTCTG	X	-	14887066-14887115	Xp22.2	Homo sapiens Fanconi anemia, complementation group B (FANCB), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]		FAAP95; FA2; FACB; FAB; FAAP90	FAAP95; FA2; FACB; FAB; FAAP90
Homo sapiens	RefSeq	XM_001719804.1	ILMN_353220	LOC100133678	XM_001719804.1	XM_001719804.1		100133678	169218139	XM_001719804.1	LOC100133678	XP_001719856.1	ILMN_3249667	0005310224	S	75	GCCCAACATCCTCATCTGTCTTGTGGACAACATCTTTCCTCCTGTGGTCA					PREDICTED: Homo sapiens similar to hCG2042724 (LOC100133678), partial mRNA.					
Homo sapiens	RefSeq	XM_930777.1	ILMN_41363	LOC642393	XM_930777.1	XM_930777.1		642393	88943974	XM_930777.1	LOC642393	XP_935870.1	ILMN_1745214	0002120435	I	531	TGACCTCTTGGGAGCAAGGGACCACCACGTTGCCTAAGGAGGGGTGAACC	1	-	115230-115277:115278-115279		PREDICTED: Homo sapiens similar to mitochondrial ribosomal protein L20, transcript variant 2 (LOC642393), mRNA.					
Homo sapiens	RefSeq	NM_139353.1	ILMN_4122	TAF1C	NM_139353.1	NM_139353.1		9013	21536366	NM_139353.1	TAF1C	NP_647610.1	ILMN_2335072	0002940707	A	2962	CAGGAGTGCTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCA	16	-	84212131-84212180	16q24.1a	Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa (TAF1C), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11250901] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase I (Pol I), originating at a Pol I-specific promoter [goid 6360] [pmid 7801123] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7801123] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase I transcription [goid 3701] [pmid 7801123] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 7801123] [evidence TAS]	SL1; MGC:39976; TAFI95; TAFI110	SL1; MGC:39976; TAFI110; TAFI95
Homo sapiens	RefSeq	NM_139353.1	ILMN_4122	TAF1C	NM_139353.1	NM_139353.1		9013	21536366	NM_139353.1	TAF1C	NP_647610.1	ILMN_1671839	0006380131	A	3575	GACTCACACAAACAGGAGCTAGCCCAATCATACACTGACTCGCGTGGGTG	16	-	84211518-84211567	16q24.1a	Homo sapiens TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa (TAF1C), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11250901] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase I (Pol I), originating at a Pol I-specific promoter [goid 6360] [pmid 7801123] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7801123] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase I transcription [goid 3701] [pmid 7801123] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 7801123] [evidence TAS]	SL1; MGC:39976; TAFI95; TAFI110	SL1; MGC:39976; TAFI110; TAFI95
Homo sapiens	RefSeq	NR_015446.1	ILMN_357093	LOC100130017	NR_015446.1	NR_015446.1		100130017	169646575	NR_015446.1	LOC100130017		ILMN_3238031	0002340022	S	1259	ACCCAGGCAGTTTGCAAAGTCATAACTCCCTATGCATCATTCCCTAAGAG	4	+	69051524-69051573	4q13.2b	Homo sapiens ferritin, light polypeptide pseudogene (LOC100130017), non-coding RNA.					
Homo sapiens	RefSeq	XM_001719052.1	ILMN_340563	LOC100130652	XM_001719052.1	XM_001719052.1		100130652	169191000	XM_001719052.1	LOC100130652	XP_001719104.1	ILMN_3259610	0002450224	M	141	AGAACTCAGAGAGCTCGTGCCCCACGGCGGGACGTTTGCATGTTTCCAGG	10	-	3860807-3860856	10p15.1e	PREDICTED: Homo sapiens hypothetical LOC100130652 (LOC100130652), mRNA.					
Homo sapiens	RefSeq	XM_942881.1	ILMN_35296	LOC647527	XM_942881.1	XM_942881.1		647527	89057564	XM_942881.1	LOC647527	XP_947974.1	ILMN_1697657	0003130482	S	610	ATCCAGGGGAGACTGACAGACGGCGAAGAGCGGCCAATGGGAGAGAGCGT					PREDICTED: Homo sapiens hypothetical protein LOC647527 (LOC647527), mRNA.					
Homo sapiens	RefSeq	NM_144772.1	ILMN_24882	APOA1BP	NM_144772.1	NM_144772.1		128240	21426826	NM_144772.1	APOA1BP	NP_658985.1	ILMN_1729533	0001570725	S	746	CCCTCACAGCCCCCAAAAAATCTGCAACCCAGTTTACCGGTCGCTACCAT	1	+	154830352-154830401	1q23.1a	Homo sapiens apolipoprotein A-I binding protein (APOA1BP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11991719] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11991719] [evidence IPI]	MGC119145; MGC119143; AIBP	MGC119145; MGC119143; AIBP
Homo sapiens	RefSeq	NR_030310.1	ILMN_388031	MIR584	NR_030310.1	NR_030310.1		693169	262205891	NR_030310.1	MIR584		ILMN_3308440	0004060735	S	6	GACCAGCCATTATGGTTTGCCTGGGACTGAGGAATTTGCTGGGATATGTC				5q33.1b	Homo sapiens microRNA 584 (MIR584), microRNA.					
Homo sapiens	RefSeq	NM_001080829.1	ILMN_172373	LOC390688	NM_001080829.1	NM_001080829.1		390688	124249361	NM_001080829.1	LOC390688	NP_001074298.1	ILMN_2130477	0004260524	S	385	GTGGACACGCTCAGCAAAAGCAGTTTCAGGCTGGGTGAGATGGACCCCAC	16	-	28619265-28619276:28620011-28620048	16p11.2e	Homo sapiens CDC37-like (LOC390688), mRNA.				A-761H5.2	A-761H5.2
Homo sapiens	RefSeq	XM_936955.1	ILMN_36121	LOC647894	XM_936955.1	XM_936955.1		647894	89030168	XM_936955.1	LOC647894	XP_942048.1	ILMN_1809294	0006590711	S	1	ATGCAAACGAACCTAGCACAGTATCTGCCGCAGCAGGACCGGCCGGGAGG					PREDICTED: Homo sapiens similar to phosphoglucomutase 5 (LOC647894), mRNA.					
Homo sapiens	RefSeq	XM_938725.1	ILMN_30619	LOC151234	XM_938725.1	XM_938725.1		151234	88956897	XM_938725.1	LOC151234	XP_943818.1	ILMN_1678720	0003060593	A	1732	GACCGAGCACGTCCAGGGAGCAAGGAGCAGACCAGTCAGCAAAATGTAAA				2q12.3c	PREDICTED: Homo sapiens hypothetical protein LOC151234 (LOC151234), mRNA.					
Homo sapiens	RefSeq	NM_004290.3	ILMN_7292	RNF14	NM_183399.1	NM_183399.1		9604	34577097	NM_183399.1	RNF14	NP_899646.1	ILMN_1714461	0004280725	A	2508	TGGGAATTTGGCTTCATACTCTTTCTTTGCAACAGCAGTGTTCTGGGTGA	5	+	141348550-141348599	5q31.3c	Homo sapiens ring finger protein 14 (RNF14), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11322894] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11322894] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10085091] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10085091] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 11322894] [evidence IEP]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 11322894] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [pmid 15831516] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 15572661] [evidence NAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10085091] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10085091] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [pmid 11322894] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ARA54; HRIHFB2038; FLJ26004; TRIAD2; HFB30	ARA54; HRIHFB2038; FLJ26004; TRIAD2; HFB30
Homo sapiens	RefSeq	NM_176824.1	ILMN_179012	BBS7	NM_176824.1	NM_176824.1		55212	29029556	NM_176824.1	BBS7	NP_789794.1	ILMN_2257833	0002850092	I	3513	CTAGGTCACTAGAACGTCATTGTGTTTTTTGTTGGTTGCCACAGCTTGGG	4	-	122965224-122965273	4q27c	Homo sapiens Bardet-Biedl syndrome 7 (BBS7), transcript variant 1, mRNA.	A protein complex that associates with the primary cilium and is involved in cilium biogenesis; consists of seven conserved proteins: BBS1, BBS2, BBS4, BBS5, BBS7, BBS8 and BBS9 [goid 34464] [pmid 17574030] [evidence IDA]	The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence ISS]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence ISS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISS]; The process by which the anatomical structures of the gut are generated and organized. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48547] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The directed movement of dispersed pigment granules towards the center of the cell [goid 51877] [evidence ISS]; A process that is carried out at the cellular level and by which the structure of a cilium is organized. Morphogenesis pertains to the creation of form [goid 60271] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18000879] [evidence IPI]	FLJ10715; BBS2L1	FLJ10715; BBS2L1
Homo sapiens	RefSeq	XM_001720149.1	ILMN_336448	LOC100133569	XM_001720149.1	XM_001720149.1		100133569	169218063	XM_001720149.1	LOC100133569	XP_001720201.1	ILMN_3236831	0002630762	S	812	TCTTTGCACTTTTCAACTCCTTGCAAGCCCAGAGAGGCATCACAGTCTGA					PREDICTED: Homo sapiens hypothetical protein LOC100133569 (LOC100133569), mRNA.					
Homo sapiens	RefSeq	NM_012342.2	ILMN_8469	BAMBI	NM_012342.2	NM_012342.2		25805	62953114	NM_012342.2	BAMBI	NP_036474.1	ILMN_1691410	0000430050	S	1418	CACACTGTCACCAGGGTTATTTGCATCCAAGGGAGCTGGAATTGAGTACC	10	+	28971562-28971611	10p11.23c	Homo sapiens BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) (BAMBI), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10942595] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8621228] [evidence TAS]			NMA	NMA
Homo sapiens	RefSeq	XM_496441.2	ILMN_168278	LOC728973	XR_015809.1	XR_015809.1		728973	113411731	XR_015809.1	LOC728973		ILMN_1685378	0003870470	S	455	CAAGCAAAATTGTGGGCAAGAGAATCCGCGTGAAACTAGATGGCAGCCGG	1	-	231491360-231491409	1q42.2c	PREDICTED: Homo sapiens similar to 40S ribosomal protein S7 (S8) (LOC728973), mRNA.					
Homo sapiens	RefSeq	XM_927251.1	ILMN_307466	C5ORF44	NR_003545.1	NR_003545.1		80006	148277005	NR_003545.1	C5orf44		ILMN_1658439	0003890682	S	307	TGTGGGTCAAAAGTGCCGGTCAAAATGGAAGTGAATCCCCCTAAACAGGA	5	+	64920864-64920913	5q12.3b	Homo sapiens chromosome 5 open reading frame 44 (C5orf44), transcript variant 4, transcribed RNA.				MGC48585; FLJ26957	
Homo sapiens	RefSeq	NM_022172.2	ILMN_29512	PC	NM_022172.2	NM_022172.2		5091	106049291	NM_022172.2	PC	NP_071504.2	ILMN_2340347	0005490196	A	3701	CTGTCCACAGCTGGACAGGAGAGACACCGCCTGCGGTGGTTCATTCCTTT	11	-	66616205-66616254	11q13.1e-q13.1f	Homo sapiens pyruvate carboxylase (PC), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16729965] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 12437512] [evidence EXP]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate [goid 4736] [pmid 12437512] [evidence EXP]; Catalysis of the reaction: ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate [goid 4736] [pmid 7918683] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8048912] [evidence TAS]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [pmid 8048912] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PCB	PCB
Homo sapiens	RefSeq	XM_001722433.1	ILMN_340532	LOC100131373	XM_001722433.1	XM_001722433.1		100131373	169163629	XM_001722433.1	LOC100131373	XP_001722485.1	ILMN_3282387	0005490192	M	162	CTCTACTGCTCACAACAGAGGAAACTGGGGTCAGGGAGGATTTGATGGAG				2p24.1d	PREDICTED: Homo sapiens similar to LP5852 protein (LOC100131373), mRNA.					
Homo sapiens	RefSeq	XM_001720999.1	ILMN_346660	LOC100129076	XM_001720999.1	XM_001720999.1		100129076	169210419	XM_001720999.1	LOC100129076	XP_001721051.1	ILMN_3189972	0007040743	A	1108	GGCCTCAGGTGGACCAGGGGATCTCTAAGGGTCTGCTGTGCCCTTTCTAT				16p11.2c	PREDICTED: Homo sapiens similar to FP17469 (LOC100129076), mRNA.					
Homo sapiens	RefSeq	NM_015918.3	ILMN_13433	POP5	NM_198202.1	NM_198202.1		51367	38016921	NM_198202.1	POP5	NP_937845.1	ILMN_1687864	0004560528	A	361	GCAGAAGCAATGGAGTGAACCTCTGCTCCCCACACAGCTGGCTACACTGC	12	-	121017088-121017120:121017121-121017137	12q24.31a	Homo sapiens processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae) (POP5), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15096576] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]	HSPC004; RPP20; RPP2	HSPC004; RPP20; RPP2
Homo sapiens	RefSeq	XM_933560.1	ILMN_39027	FLJ30092	XM_933560.1	XM_933560.1		196515	89035747	XM_933560.1	FLJ30092	XP_938653.1	ILMN_1724966	0000430673	I	10292	GGGCCAAATCCAGGTGTTCAAACAGTATCATCTGGTATTGGTCTCAGGCC	12	-	111087440-111087489	12q24.13a	PREDICTED: Homo sapiens AF-1 specific protein phosphatase, transcript variant 3 (FLJ30092), mRNA.					
Homo sapiens	RefSeq	NM_006405.5	ILMN_1249	TM9SF1	NM_006405.5	NM_006405.5		10548	62460631	NM_006405.5	TM9SF1	NP_006396.2	ILMN_1709334	0000780296	I	1948	CGATCTGTGCTGAGTGTTGGCTCCACCGGCCTCTTCATCTTCCTCTACTC	14	-	24658792-24658841	14q12a	Homo sapiens transmembrane 9 superfamily member 1 (TM9SF1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9332367] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HMP70; MP70	HMP70; MP70
Homo sapiens	RefSeq	XM_001725767.1	ILMN_340958	LOC100132476	XM_001725767.1	XM_001725767.1		100132476	169210922	XM_001725767.1	LOC100132476	XP_001725819.1	ILMN_3240403	0004760333	S	91	CAGACCACCTGTTGCAGGACCACCTGCTACCGCCCCAGCTGTTGTGTGTC	17	+	36494075-36494124	17q21.2a	PREDICTED: Homo sapiens similar to keratin associated protein 4-5 (LOC100132476), mRNA.					
Homo sapiens	RefSeq	XR_042487.1	ILMN_350587	LOC727768	XR_042487.1	XR_042487.1		727768	169217720	XR_042487.1	LOC727768		ILMN_3293694	0002640010	M	580	ATGACCAACAGTCTCTTCCTCGACCGCCAGAATTGCATGGCCCATCATAC				Yq11.1b	PREDICTED: Homo sapiens misc_RNA (LOC727768), miscRNA.					
Homo sapiens	RefSeq	NM_021709.1	ILMN_6846	SIVA	NM_021709.1	NM_021709.1		10572	11277469	NM_021709.1	SIVA	NP_068355.1	ILMN_1696046	0004670487	A	440	CGGTGTTCACACTGAACTGTGGGGTCGACGGGAGGGGTGCCTTTTACATG	14	+	104296937-104296986	14q32.33b	Homo sapiens CD27-binding (Siva) protein (SIVA), transcript variant 2, mRNA.				CD27BP	CD27BP
Homo sapiens	RefSeq	NM_015384.3	ILMN_5211	NIPBL	NM_015384.3	NM_015384.3		25836	47578106	NM_015384.3	NIPBL	NP_056199.2	ILMN_1786377	0000770594	I	8436	GAGGAGTCAACGTATTTCGCAGCGTATTACGTAAAATGATTTTTATGTGC	5	+	37099849-37099882:37099883-37099898	5p13.2b	Homo sapiens Nipped-B homolog (Drosophila) (NIPBL), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ44854; CDLS1; IDN3-B; FLJ13354; IDN3; DKFZp434L1319; FLJ11203; CDLS; FLJ12597; FLJ13648	FLJ44854; CDLS1; IDN3-B; FLJ13354; IDN3; DKFZp434L1319; FLJ11203; CDLS; FLJ12597; FLJ13648
Homo sapiens	Unigene	Hs.335004	ILMN_86618	HS.335004	Hs.335004		Hs.335004		27879038	BX112865			ILMN_1854359	0002570274	S	419	CTGCACCCCAGCTCCAAGCACAAGGCATTACAAGAAGGTCCAGTGGTTCC	1	-	30655029-30655078		BX112865 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998A054508, mRNA sequence					
Homo sapiens	RefSeq	XM_927285.1	ILMN_41797	LOC653410	XM_927285.1	XM_927285.1		653410	89056788	XM_927285.1	LOC653410	XP_932378.1	ILMN_1678631	0002810333	S	510	AGTCAAGGCCTCGCCGCCAGCCTTCCAGGCTGCAGAAGACTCCGACGGCA	19	+	40950676-40950703:40950798-40950807:40950897-40950908		PREDICTED: Homo sapiens similar to hypothetical protein BC017947 (LOC653410), mRNA.					
Homo sapiens	Unigene	Hs.538511	ILMN_103947	HS.538511	Hs.538511		Hs.538511		27503569	BC042649			ILMN_1859109	0006560437	S	952	CACTCACATGGCTTTGAGCCCATGAGATGGCCTTGGACAAAGCGGCAATG	12	-	130346901-130346950		Homo sapiens cDNA clone IMAGE:4826012					
Homo sapiens	RefSeq	NM_030633.1	ILMN_5346	KIAA1712	NM_030633.1	NM_030633.1		80817	30794213	NM_030633.1	KIAA1712	NP_085136.1	ILMN_1731453	0001470181	S	3684	GCTCAACAGTGAAAGTAGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATC	4	+	175489879-175489928	4q34.1c	Homo sapiens KIAA1712 (KIAA1712), mRNA.				PS1TP3	PS1TP3
Homo sapiens	RefSeq	XM_001720182.1	ILMN_336525	LOC653707	XM_001720182.1	XM_001720182.1		653707	169216982	XM_001720182.1	LOC653707	XP_001720234.1	ILMN_3277442	0002630066	M	153	TGCACAGCTAAAGGAAGCTGAAGATGAATTCGATGAAGATATGCAAGCTA				Xp22.11b	PREDICTED: Homo sapiens similar to hCG2040277 (LOC653707), mRNA.					
Homo sapiens	RefSeq	XM_944890.1	ILMN_163901	LOC644029	XR_017397.1	XR_017397.1		644029	113425203	XR_017397.1	LOC644029		ILMN_1659095	0000580088	A	487	GCTGGTGCTGATTGCACACGACGTGGATCCCATCGAGCTGGTTGTCTTCT	15	-	45809922-45809971	15q21.1c	PREDICTED: Homo sapiens similar to 60S ribosomal protein L7a (LOC644029), mRNA.					
Homo sapiens	RefSeq	XM_944890.1	ILMN_163901	LOC644029	XR_017397.1	XR_017397.1		644029	113425203	XR_017397.1	LOC644029		ILMN_1808837	0000160575	I	307	CGAGCTGCATAAGCTGGCCCACAAGTACAGACCAGAGACAAAGCAAGAGA	15	-	45810102-45810151	15q21.1c	PREDICTED: Homo sapiens similar to 60S ribosomal protein L7a (LOC644029), mRNA.					
Homo sapiens	RefSeq	NM_019845.2	ILMN_26680	RPRM	NM_019845.2	NM_019845.2		56475	54792141	NM_019845.2	RPRM	NP_062819.1	ILMN_1665425	0005550414	S	1356	GCTCGTGACTGCACGGTTTACGCCACAAAAGTGCTCTTGACATCCGTGAC	2	-	154333917-154333966	2q23.3e	Homo sapiens reprimo, TP53 dependent G2 arrest mediator candidate (RPRM), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10930422] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10930422] [evidence TAS]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ90327; REPRIMO	FLJ90327; REPRIMO
Homo sapiens	RefSeq	NM_003560.2	ILMN_13517	PLA2G6	NM_003560.2	NM_003560.2		8398	52486193	NM_003560.2	PLA2G6	NP_003551.2	ILMN_1798955	0003390270	I	1434	CCTTCTCCCTGGAAAGAGCTCAGCCCCCACCGATCAGCCTAAACAACCTA	22	-	38524276-38524325	22q13.1b	Homo sapiens phospholipase A2, group VI (cytosolic, calcium-independent) (PLA2G6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [pmid 9417066] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [pmid 9417066] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PNPLA9; PLA2; INAD1; GVI; CaI-PLA2; iPLA2	PNPLA9; PLA2; INAD1; GVI; CaI-PLA2; iPLA2
Homo sapiens	RefSeq	XM_001717986.1	ILMN_336192	LOC100130958	XM_001717986.1	XM_001717986.1		100130958	169210563	XM_001717986.1	LOC100130958	XP_001718038.1	ILMN_3254462	0002100181	M	330	CTGCCAAGAGAAGGAAAGCGAGGCTCAGAGGTTGGATGTCAGAGGACAGC				16q23.1c	PREDICTED: Homo sapiens hypothetical protein LOC100130958 (LOC100130958), mRNA.					
Homo sapiens	RefSeq	NM_153832.1	ILMN_175678	LOC730012	XM_001132077.1	XM_001132077.1		730012	113411501	XM_001132077.1	LOC730012	XP_001132077.1	ILMN_1658586	0000450717	I	220	GTTCTAGGACTGGTCCGCAGAGAAAGCACCCAGGAGCAGAGCGCTTCGGA	1	-	166320812-166320861	1q24.2a	PREDICTED: Homo sapiens similar to G protein-coupled receptor 161 (LOC730012), mRNA.					FLJ33952; RE2
Homo sapiens	RefSeq	NM_001005386.1	ILMN_163247	ACTR2	NM_001005386.1	NM_001005386.1		10097	53692186	NM_001005386.1	ACTR2	NP_001005386.1	ILMN_2388605	0005570196	A	3177	GCAGTTGGGTTCAGGGAAATGGGATTGACTTGGCCTTCAGGCTCCTTTGG	2	+	65351207-65351256	2p14c	Homo sapiens ARP2 actin-related protein 2 homolog (yeast) (ACTR2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [pmid 9230079] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9230079] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	ARP2	ARP2
Homo sapiens	RefSeq	NM_173565.1	ILMN_175454	LOC222967	NM_173565.1	NM_173565.1		222967	27734854	NM_173565.1	LOC222967	NP_775836.2	ILMN_2297662	0002030440	I	2771	GTGCTCAAGAAGCCGGCAGACGTGTCATCCTCTCACCTCATACTGGACCC	7	-	5932588-5932637	7p22.1b	Homo sapiens hypothetical protein LOC222967 (LOC222967), mRNA.					
Homo sapiens	RefSeq	NM_173565.1	ILMN_175454	LOC222967	NM_173565.1	NM_173565.1		222967	27734854	NM_173565.1	LOC222967	NP_775836.2	ILMN_2413377	0003060113	A	1535	AGAAGAATCTACAGCTTTTACAGCAGCCTGGGATGCGGCCACTCTCTGGA	7	-	5954477-5954526	7p22.1b	Homo sapiens hypothetical protein LOC222967 (LOC222967), mRNA.					
Homo sapiens	RefSeq	NM_198324.1	ILMN_169937	CS	NM_198324.1	NM_198324.1		1431	38327626	NM_198324.1	CS	NP_938083.1	ILMN_1709775	0000050187	I	258	GCATTTGGGAGATGCTTGTCTTACTTGGCTGTTGCTTCTCCTGCTGCTGG	12	-	54978667-54978716	12q13.2c	Homo sapiens citrate synthase (CS), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 9543345] [evidence IDA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 9809442] [evidence EXP]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]	Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA [goid 4108] [pmid 9543345] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA [goid 4108] [pmid 9809442] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_052956.1	ILMN_19393	ACSM1	NM_052956.1	NM_052956.1		116285	16418448	NM_052956.1	ACSM1	NP_443188.1	ILMN_1661434	0005870669	S	1729	CAGAGCTGCCAAAAACCATCACTGGCAAGATTGAACGGAAGGAACTTCGG	16	-	20542332-20542381	16p12.2c	Homo sapiens acyl-CoA synthetase medium-chain family member 1 (ACSM1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	BUCS1; MACS1	BUCS1; MACS1
Homo sapiens	RefSeq	NM_012318.1	ILMN_13412	LETM1	NM_012318.1	NM_012318.1		3954	6912481	NM_012318.1	LETM1	NP_036450.1	ILMN_1710668	0000130270	S	3610	TAAGGTCAGGTTGGTTCCTGGCAAAAATGTACCTCCAGGGGCCTCCAAGC	4	-	1784806-1784855	4p16.3b	Homo sapiens leucine zipper-EF-hand containing transmembrane protein 1 (LETM1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10486213] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10486213] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10486213] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10486213] [evidence TAS]		
Homo sapiens	RefSeq	NM_005682.4	ILMN_22492	GPR56	NM_005682.4	NM_005682.4		9289	41584199	NM_005682.4	GPR56	NP_005673.3	ILMN_1697228	0004780528	I	28	AGGTGGAAGGGGAGGAGCAGGCCACACAGGCACAGGCCGGTGAGGGACCT	16	+	56211486-56211535	16q13d	Homo sapiens G protein-coupled receptor 56 (GPR56), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10049584] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10049584] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10049584] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 10049584] [evidence TAS]	BFPP; DKFZp781L1398; TM7LN4; TM7XN1	BFPP; DKFZp781L1398; TM7LN4; TM7XN1
Homo sapiens	RefSeq	NM_018931.2	ILMN_18143	PCDHB11	NM_018931.2	NM_018931.2		56125	14195592	NM_018931.2	PCDHB11	NP_061754.1	ILMN_1747596	0002120504	S	272	ACAGGGAGGAGCTCTGCGGTTCCATCGAGCCTTGCGTGCTACATTTGCAG	5	+	140559803-140559852	5q31.3b	Homo sapiens protocadherin beta 11 (PCDHB11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 12231349] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 12231349] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11322959] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11322959] [evidence NAS]	MGC138337; MGC142171; ME2; PCDH-BETA11	MGC138337; MGC142171; ME2; PCDH-BETA11
Homo sapiens	RefSeq	NM_018931.2	ILMN_18143	PCDHB11	NM_018931.2	NM_018931.2		56125	14195592	NM_018931.2	PCDHB11	NP_061754.1	ILMN_2095114	0001510398	S	3044	CTTAGGCTGGCCTTTAACTTCTGAGCTCAAGAGATGCACTCCCCTCAGCC	5	+	140562575-140562624	5q31.3b	Homo sapiens protocadherin beta 11 (PCDHB11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 12231349] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 12231349] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11322959] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11322959] [evidence NAS]	MGC138337; MGC142171; ME2; PCDH-BETA11	MGC138337; MGC142171; ME2; PCDH-BETA11
Homo sapiens	RefSeq	NM_015717.1	ILMN_17693	CD207	NM_015717.2	NM_015717.2		50489	90991711	NM_015717.2	CD207	NP_056532.2	ILMN_1718754	0003830678	S	1672	ACTCCCTTAGTACACTGGAGTGCCGAGCCCTGCCTTCCACCCAGCGTCCA	2	-	71057493-71057542	2p13.3c	Homo sapiens CD207 molecule, langerin (CD207), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [pmid 10661407] [evidence TAS]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [pmid 10661407] [evidence TAS]	CLEC4K; LANGERIN	CLEC4K; LANGERIN
Homo sapiens	RefSeq	NM_001005732.1	ILMN_27397	C21ORF34	NM_001005732.1	NM_001005732.1		388815	54112409	NM_001005732.1	C21orf34	NP_001005732.1	ILMN_1702226	0003840553	I	598	GCCTCAAGTGACTACTCTGTGGAATCATCTGTCCTTGCCTTTGAATTAGC	21	+	16888549-16888598	21q21.1b	Homo sapiens chromosome 21 open reading frame 34 (C21orf34), transcript variant 1, mRNA.				FLJ38295; C21orf35	FLJ38295; C21orf35
Homo sapiens	RefSeq	NM_018303.4	ILMN_172388	EXOC2	NM_018303.4	NM_018303.4		55770	30581133	NM_018303.4	EXOC2	NP_060773.3	ILMN_2065783	0002640110	S	3926	CCCACATTCACTGCTGACTGGCTTCACTGGAATAGGTTCAGGTCACCGGG	6	-	517635-517644:521757-521796	6p25.3b	Homo sapiens exocyst complex component 2 (EXOC2), mRNA.		A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12459492] [evidence IPI]; Interacting selectively with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases [goid 17160] [evidence IEA]; Interacting selectively with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases [goid 17160] [evidence IEA]	Sec5p; FLJ11026; SEC5L1; SEC5	Sec5p; FLJ11026; SEC5L1; SEC5
Homo sapiens	RefSeq	NM_018303.4	ILMN_172388	EXOC2	NM_018303.4	NM_018303.4		55770	30581133	NM_018303.4	EXOC2	NP_060773.3	ILMN_1731180	0002970390	S	3909	CAGCCGCATGCACTTGCCCCACATTCACTGCTGACTGGCTTCACTGGAAT	6	-	521764-521813	6p25.3b	Homo sapiens exocyst complex component 2 (EXOC2), mRNA.		A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12459492] [evidence IPI]; Interacting selectively with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases [goid 17160] [evidence IEA]; Interacting selectively with Ral protein, any member of the Ral subfamily of the Ras superfamily of monomeric GTPases [goid 17160] [evidence IEA]	Sec5p; FLJ11026; SEC5L1; SEC5	Sec5p; FLJ11026; SEC5L1; SEC5
Homo sapiens	RefSeq	NM_001001700.1	ILMN_175738	FLJ45966	NM_001001700.1	NM_001001700.1		401120	48717406	NM_001001700.1	FLJ45966	NP_001001700.1	ILMN_1784492	0007330431	S	2305	CTGAGCACCCATGGCAGTGACCAGCAGTGACCATCATCACCCAATGAGGA	4	+	8563511-8563560	4p16.1c	Homo sapiens FLJ45966 protein (FLJ45966), mRNA.					
Homo sapiens	RefSeq	NM_001001700.1	ILMN_175738	FLJ45966	NM_001001700.1	NM_001001700.1		401120	48717406	NM_001001700.1	FLJ45966	NP_001001700.1	ILMN_2150708	0006400187	S	2716	GGGGGTGCGATCTCGGTTCACTGCACCCTCTGCCTCCCAGGTTCAAGCAA	4	+	8564749-8564798	4p16.1c	Homo sapiens FLJ45966 protein (FLJ45966), mRNA.					
Homo sapiens	RefSeq	NM_023000.2	ILMN_21848	ARID4A	NM_023000.2	NM_023000.2		5926	115334672	NM_023000.2	ARID4A	NP_075376.2	ILMN_2338447	0002510368	A	3089	TGAGGATGCAATGCCTCTGATCGGGCCTGAAACCTTGGTTTGCCATGAAG	14	+	57901395-57901444	14q23.1b	Homo sapiens AT rich interactive domain 4A (RBP1-like) (ARID4A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8414517] [evidence TAS]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8414517] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8414517] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1857421] [evidence TAS]	RBP1; RBP-1; RBBP1	RBP1; RBP-1; RBBP1
Homo sapiens	RefSeq	NM_032276.2	ILMN_13013	RHBDD1	NM_032276.2	NM_032276.2		84236	33300638	NM_032276.2	RHBDD1	NP_115652.2	ILMN_1681543	0007570192	S	1829	GCAGATGCCACATACAGAGTAGAGCGAAGGCATTTGGTGGATCGGTCACT	2	+	227569242-227569291	2q36.3b	Homo sapiens rhomboid domain containing 1 (RHBDD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DKFZp547E052; MGC117258	DKFZp547E052; MGC117258
Homo sapiens	RefSeq	NM_032276.2	ILMN_13013	RHBDD1	NM_032276.2	NM_032276.2		84236	33300638	NM_032276.2	RHBDD1	NP_115652.2	ILMN_2209766	0001780736	S	1958	GCCAAATGTCCAAAACACGCCCTTGGGCCCCGCCACGTTACAATCCACAG	2	+	227569371-227569420	2q36.3b	Homo sapiens rhomboid domain containing 1 (RHBDD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DKFZp547E052; MGC117258	DKFZp547E052; MGC117258
Homo sapiens	RefSeq	XM_934133.1	ILMN_32509	LOC644624	XM_934133.1	XM_934133.1		644624	88976611	XM_934133.1	LOC644624	XP_939226.1	ILMN_1781663	0000160400	I	17	TAAATGTCAGTGTAGTCACTGAATGCAGACTGGATTTTTGCCTGACTACG	4	+	124790619-124790668	4q28.1a	PREDICTED: Homo sapiens hypothetical protein LOC644624, transcript variant 2 (LOC644624), mRNA.					
Homo sapiens	RefSeq	XM_293380.3	ILMN_169337	ANKRD58	XM_293380.4	XM_293380.4		347454	113430090	XM_293380.4	ANKRD58	XP_293380.2	ILMN_1692849	0005270474	S	200	GGGACGGCCGCGGCGGCAGCTTCAAGACCATGGCCCAGCTCGGAGGGGCC	X	+	118776630-118776679	Xq24c	PREDICTED: Homo sapiens ankyrin repeat domain 58 (ANKRD58), mRNA.					
Homo sapiens	RefSeq	XR_038342.1	ILMN_334314	LOC100134256	XR_038342.1	XR_038342.1		100134256	169217592	XR_038342.1	LOC100134256		ILMN_3235158	0002630767	S	1044	GACCCACTGATCAGCGTCAACCTCAGAGGCAGGTGCACAAGGAGGCTGAT					PREDICTED: Homo sapiens misc_RNA (LOC100134256), miscRNA.					
Homo sapiens	RefSeq	NM_005183.2	ILMN_29802	CACNA1F	NM_005183.2	NM_005183.2		778	53832006	NM_005183.2	CACNA1F	NP_005174.2	ILMN_1659138	0001850528	S	5837	TGCAGATGCGTGTCGCCTGACGCTGGATGAGATGGACAATGCTGCCAGTG	X	-	49061706-49061755	Xp11.23b	Homo sapiens calcium channel, voltage-dependent, L type, alpha 1F subunit (CACNA1F), mRNA.	A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 15897456] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15897456] [evidence IDA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events involved in visual perception in which a sensory light stimulus is received by a cell and converted into a molecular signal [goid 50908] [pmid 7571473] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA];  [goid 15270] [pmid 15897456] [evidence IDA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CORDX3; Cav1.4; CSNB2A; CSNBX2; JMC8; CORDX; CSNB2; COD3; JM8	CORDX3; Cav1.4; CSNB2A; CSNBX2; JMC8; CORDX; CSNB2; COD3; JM8
Homo sapiens	RefSeq	NM_033627.3	ILMN_169775	TREX1	NM_033627.3	NM_033627.3		11277	38787996	NM_033627.3	TREX1	NP_338597.1	ILMN_1770955	0003140338	I	1489	AGCCGCAAGATTGGGGAGAACTGTGAACACAACCAGCCCACCCCCTCATC	3	+	48477764-48477813	3p21.31e	Homo sapiens three prime repair exonuclease 1 (TREX1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 10391904] [evidence NAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 11278605] [evidence NAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 10391904] [evidence NAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 11278605] [evidence NAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 10391904] [evidence NAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 11278605] [evidence NAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 10391904] [evidence NAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 10391904] [evidence TAS]; Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a DNA molecule [goid 8296] [pmid 10393201] [evidence TAS]; Catalysis of the degradation of double-stranded DNA. It acts progressively in a 3' to 5' direction, releasing 5'-phosphomononucleotides [goid 8853] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with the mismatch repair complex MutLalpha [goid 32405] [pmid 16713580] [evidence IDA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [pmid 16713580] [evidence IDA]; Interacting selectively with an adenyl deoxyribonucleotide, any compound consisting of adenosine esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety [goid 32558] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10391904] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11278605] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	ATRIP; DRN3; FLJ12343; DKFZp434J0310; AGS1	ATRIP; DRN3; FLJ12343; DKFZp434J0310
Homo sapiens	Unigene	Hs.537371	ILMN_103271	HS.537371	Hs.537371		Hs.537371		50949767	CR627208			ILMN_1818536	0001570524	S	4911	tcccagaggccagaagaggcaagggaatatcctcccctagaggctgcaga	22	+	26043279-26043328		Homo sapiens mRNA; cDNA DKFZp781G1319 (from clone DKFZp781G1319)					
Homo sapiens	RefSeq	NM_014813.1	ILMN_7215	LRIG2	NM_014813.1	NM_014813.1		9860	7662319	NM_014813.1	LRIG2	NP_055628.1	ILMN_1654099	0005700541	S	3827	GTGTGCCTGGGATTCTTCAGTGGTTTCAGGCAGATAGTTGAGACTGGGGC	1	+	113468677-113468726	1p13.2c	Homo sapiens leucine-rich repeats and immunoglobulin-like domains 2 (LRIG2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0806; DKFZp451C181	KIAA0806; DKFZp451C181
Homo sapiens	RefSeq	NM_024986.1	ILMN_29944	FLJ12331	NM_024986.1	NM_024986.1		80052	13376487	NM_024986.1	FLJ12331	NP_079262.1	ILMN_1726952	0001940142	S	1719	GCCAGTGAAGAGAAAGCTTTCCATAGTGTGGTTTACTCAGAGCAGGTGAC	16	+	67627108-67627157	16q22.1d	Homo sapiens hypothetical protein FLJ12331 (FLJ12331), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC132481; MGC132479	MGC132481; MGC132479
Homo sapiens	RefSeq	NM_207119.1	ILMN_30339	LRRC20	NM_018239.2	NM_018239.2		55222	46397372	NM_018239.2	LRRC20	NP_060709.2	ILMN_1690523	0006620379	A	2801	TCTGCTTGGAGAGTTTGCCCTTGTCTGTCTTGGAAAGTGTGGGCAGCCAC	10	-	72058805-72058854	10q22.1a-q22.1b	Homo sapiens leucine rich repeat containing 20 (LRRC20), transcript variant 2, mRNA.				FLJ10751; FLJ10844	FLJ10751; FLJ10844
Homo sapiens	RefSeq	NM_018239.2	ILMN_30339	LRRC20	NM_018239.2	NM_018239.2		55222	46397372	NM_018239.2	LRRC20	NP_060709.2	ILMN_2408938	0007160328	A	2309	CCAGAGCCTTGCAACTCAAAGTGTGGTCTGTGGACCAGCAGCGGCAGTGA	10	-	72059297-72059346	10q22.1a-q22.1b	Homo sapiens leucine rich repeat containing 20 (LRRC20), transcript variant 2, mRNA.				FLJ10751; FLJ10844	FLJ10751; FLJ10844
Homo sapiens	RefSeq	XM_940614.1	ILMN_41895	LOC648966	XM_940614.1	XM_940614.1		648966	88956795	XM_940614.1	LOC648966	XP_945707.1	ILMN_1812865	0004560598	S	438	ACCAGCCCGGTGACTCAGTTTCTACTCCTTCTTCCGGAGTTGACCATCAG					PREDICTED: Homo sapiens hypothetical protein LOC648966 (LOC648966), mRNA.					
Homo sapiens	RefSeq	NM_032217.3	ILMN_178632	ANKRD17	NM_032217.3	NM_032217.3		26057	38683806	NM_032217.3	ANKRD17	NP_115593.3	ILMN_1787064	0003130156	I	3138	ACAAGGGTTAATGGTAGCCAGCCCTGCTCAGACCCTCAATGACACGCTGG	4	-	74224126-74224175	4q13.3d	Homo sapiens ankyrin repeat domain 17 (ANKRD17), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	KIAA0697; GTAR; FLJ22206; NY-BR-16	KIAA0697; GTAR; FLJ22206; NY-BR-16
Homo sapiens	RefSeq	NM_032822.1	ILMN_13374	FAM136A	NM_032822.1	NM_032822.1		84908	14249519	NM_032822.1	FAM136A	NP_116211.1	ILMN_1655307	0003890671	S	1600	GGCTTGTGCAGCTGGCAGTGTTCCTGCCCCAGCATGGCACCTTATTGTTT	2	-	70376750-70376799	2p14a	Homo sapiens family with sequence similarity 136, member A (FAM136A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	FLJ14668	FLJ14668
Homo sapiens	RefSeq	NM_001003895.1	ILMN_16760	CDY1B	NM_001003894.1	NM_001003894.1		253175	51538572	NM_001003894.1	CDY1B	NP_001003894.1	ILMN_1662151	0003140176	A	1	AACAGGCAGGAAGAAAGCTTTCTGTACTACACCAGAGGGTTGGGGCTGTG	Y	-	26194111-26194160	Yq11.223e	Homo sapiens chromodomain protein, Y-linked, 1B (CDY1B), transcript variant 1, mRNA.				CDY; CDY1	CDY; CDY1
Homo sapiens	RefSeq	NM_001003894.1	ILMN_16760	CDY1B	NM_001003894.1	NM_001003894.1		253175	51538572	NM_001003894.1	CDY1B	NP_001003894.1	ILMN_2288285	0001470008	I	2051	CCATAGCTAAGGCTTGGAAACAGAACTGGAAATGTCCAAGCTATGTATTT	Y	-	26192061-26192110	Yq11.223e	Homo sapiens chromodomain protein, Y-linked, 1B (CDY1B), transcript variant 1, mRNA.				CDY; CDY1	CDY; CDY1
Homo sapiens	RefSeq	NM_001003894.1	ILMN_16760	CDY1B	NM_001003894.1	NM_001003894.1		253175	51538572	NM_001003894.1	CDY1B	NP_001003894.1	ILMN_2288290	0005420465	I	1934	AATTGATGAGTTTTAATTGTCAGTCTGTCTGCTCAGGACACAAGAACTAA	Y	-	26192178-26192212:26192213-26192227	Yq11.223e	Homo sapiens chromodomain protein, Y-linked, 1B (CDY1B), transcript variant 1, mRNA.				CDY; CDY1	CDY; CDY1
Homo sapiens	RefSeq	NM_001003894.1	ILMN_16760	CDY1B	NM_001003894.1	NM_001003894.1		253175	51538572	NM_001003894.1	CDY1B	NP_001003894.1	ILMN_1693537	0006350092	I	1931	TAAAATTGATGAGTTTTAATTGTCAGTCTGTCTGCTCAGGACACAAGAAC	Y	-	26192181-26192212:26192213-26192230	Yq11.223e	Homo sapiens chromodomain protein, Y-linked, 1B (CDY1B), transcript variant 1, mRNA.				CDY; CDY1	CDY; CDY1
Homo sapiens	RefSeq	XR_039320.1	ILMN_348659	LOC645805	XR_039320.1	XR_039320.1		645805	169164411	XR_039320.1	LOC645805		ILMN_3291543	0002680608	M	812	GGGCGAAGCTGCCCTAAGGATCTTCCTTTAATTTGGAGTAATACTGTGCC				2q33.1g	PREDICTED: Homo sapiens misc_RNA (LOC645805), miscRNA.					
Homo sapiens	RefSeq	NM_015189.1	ILMN_309747	EXOC6B	NM_015189.1	NM_015189.1		23233	149363655	NM_015189.1	EXOC6B	NP_056004.1	ILMN_3243431	0006270477	S	2380	GACTATGGTCAGCCCAACTGCAAGTACCTCCGGGTAAACCCAGTGACTGC	2	-	72722627-72722668:72723583-72723590	2p13.3a-p13.2b	Homo sapiens exocyst complex component 6B (EXOC6B), mRNA.	A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [evidence IEA]	The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		SEC15B; SEC15L2; KIAA0919	KIAA0919; SEC15B; SEC15L2
Homo sapiens	Unigene	Hs.557431	ILMN_112828	HS.557431	Hs.557431		Hs.557431		12079624	BF753039			ILMN_1852159	0001340367	S	88	CAGGCCGGTTTCATGTTAACCGTCTTACACTCTGACATCAGCCAAGGCGT	15	-	66380704-66380753		RC3-BN0425-011200-022-c08 BN0425 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NR_029702.1	ILMN_388916	MIR149	NR_029702.1	NR_029702.1		406941	262205405	NR_029702.1	MIR149		ILMN_3308612	0000580647	S	10	GAGCTCTGGCTCCGTGTCTTCACTCCCGTGCTTGTCCGAGGAGGGAGGGA				2q37.3e	Homo sapiens microRNA 149 (MIR149), microRNA.					
Homo sapiens	RefSeq	NM_032626.5	ILMN_19179	RBBP6	NM_032626.5	NM_032626.5		5930	38683864	NM_032626.5	RBBP6	NP_116015.2	ILMN_2309449	0004830593	A	1287	ACAAGCAAGACATATGTTATAAGTCGAACTGAACCAGCGATGGCAACTAC	16	+	24465065-24465084:24467767-24467796	16p12.1b	Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 3, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8595913] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RBQ-1; DKFZp761B2423; P2P-R; DKFZp686P0638; MY038	RBQ-1; DKFZp761B2423; P2P-R; DKFZp686P0638; MY038
Homo sapiens	RefSeq	NM_032626.5	ILMN_19179	RBBP6	NM_032626.5	NM_032626.5		5930	38683864	NM_032626.5	RBBP6	NP_116015.2	ILMN_2309446	0006900161	A	1130	GAAGCAGATTATGGGGAGAGAGAAGCTGAAAGCTGCCGACTGCGACCTGC	16	+	24459538-24459587	16p12.1b	Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 3, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8595913] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RBQ-1; DKFZp761B2423; P2P-R; DKFZp686P0638; MY038	RBQ-1; DKFZp761B2423; P2P-R; DKFZp686P0638; MY038
Homo sapiens	RefSeq	NM_032626.5	ILMN_19179	RBBP6	NM_032626.5	NM_032626.5		5930	38683864	NM_032626.5	RBBP6	NP_116015.2	ILMN_1665135	0004180356	I	1503	TGTGGCATCACTTGCACACTTATTTTGTAGAAATGGGTAATTTGTGCCCG	16	+	24467963-24468012	16p12.1b	Homo sapiens retinoblastoma binding protein 6 (RBBP6), transcript variant 3, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8595913] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RBQ-1; DKFZp761B2423; P2P-R; DKFZp686P0638; MY038	RBQ-1; DKFZp761B2423; P2P-R; DKFZp686P0638; MY038
Homo sapiens	RefSeq	NM_053003.2	ILMN_2172	SIGLEC12	NM_053003.2	NM_053003.2		89858	24497436	NM_053003.2	SIGLEC12	NP_443729.1	ILMN_1724709	0002070113	I	83	ACCCCTGCTCTGTGGGAGAGTGGGGGCTAAGGAACAGAAGGATTACCTGC	19	-	56696723-56696772	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 12 (SIGLEC12), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Siglec-XII; FLJ38600; SLG; Siglec-12; S2V; SIGLECL1; Siglec-L1	Siglec-XII; FLJ38600; SLG; Siglec-12; S2V; SIGLECL1; Siglec-L1
Homo sapiens	RefSeq	NM_053003.2	ILMN_2172	SIGLEC12	NM_053003.2	NM_053003.2		89858	24497436	NM_053003.2	SIGLEC12	NP_443729.1	ILMN_1676363	0002570129	A	1832	CATCCCCAAGTGAGAAACTGCAGAGACTCAGGCCTGTTTGAGGGCTCACG	19	-	56686669-56686706:56686707-56686718	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 12 (SIGLEC12), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	Siglec-XII; FLJ38600; SLG; Siglec-12; S2V; SIGLECL1; Siglec-L1	Siglec-XII; FLJ38600; SLG; Siglec-12; S2V; SIGLECL1; Siglec-L1
Homo sapiens	RefSeq	NM_201403.1	ILMN_7594	MOBKL2C	NM_201403.2	NM_201403.2		148932	134142063	NM_201403.2	MOBKL2C	NP_958805.1	ILMN_1719677	0006020373	I	124	TGCAGGAGAAAGGCGATCCTGTGGCTGGGAATGTGACCCCACGGCCAGAA	1	-	47082390-47082439	1p33d	Homo sapiens MOB1, Mps One Binder kinase activator-like 2C (yeast) (MOBKL2C), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MOB3C; MGC26743	MOB3C; MGC26743
Homo sapiens	RefSeq	XM_001717407.1	ILMN_350112	LOC723805	XM_001717407.1	XM_001717407.1		723805	169213375	XM_001717407.1	LOC723805	XP_001717459.1	ILMN_3293173	0003440328	M	228	CTCTGAAGATACCAGCGAGTGGGGAGCAGAGCCAGCAGACGGGGAAAACA	19	+	44622279-44622321:44622420-44622426	19q13.2a	PREDICTED: Homo sapiens interleukin-like (LOC723805), mRNA.					
Homo sapiens	RefSeq	XM_931799.1	ILMN_15637	ARMCX3	NM_177948.2	NM_177948.2		51566	47578121	NM_177948.2	ARMCX3	NP_808817.1	ILMN_1664675	0006180725	S	50	GGCTGCAAGCGGGACATATGTCTTGGAAAGCGGGCGGCGAGTGGGAGAGA	X	+	100765056-100765076:100765432-100765460	Xq22.1c	Homo sapiens armadillo repeat containing, X-linked 3 (ARMCX3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ALEX3; KIAA0443; dJ545K15.2; DKFZp781N1954; MGC12199	
Homo sapiens	RefSeq	NM_177948.2	ILMN_15637	ARMCX3	NM_177948.2	NM_177948.2		51566	47578121	NM_177948.2	ARMCX3	NP_808817.1	ILMN_1651741	0003780753	I	5	TCCCACTCGCCGCCCGCTTTCCAAGACATATGTCCCGCTTGCAGCCCATT	X	+	100765011-100765060	Xq22.1c	Homo sapiens armadillo repeat containing, X-linked 3 (ARMCX3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	ALEX3; KIAA0443; dJ545K15.2; DKFZp781N1954; MGC12199	ALEX3; KIAA0443; dJ545K15.2; DKFZp781N1954; MGC12199
Homo sapiens	RefSeq	XM_001723164.1	ILMN_340676	LOC100129952	XM_001723164.1	XM_001723164.1		100129952	169162048	XM_001723164.1	LOC100129952	XP_001723216.1	ILMN_3259712	0006450010	M	271	TCACCACTATCTGGAGAGTTTGACATGTTTTCCTCTCTGAACCTGTTATG				1q43c	PREDICTED: Homo sapiens similar to mCG146274 (LOC100129952), mRNA.					
Homo sapiens	RefSeq	XM_940988.1	ILMN_43900	LOC651769	XM_940988.1	XM_940988.1		651769	89062145	XM_940988.1	LOC651769	XP_946081.1	ILMN_1787751	0001010192	S	475	GCTCTGGTGATTCTGGCTATAATACGGATGCCTTCAGAGGCTGGCAAACG					PREDICTED: Homo sapiens similar to Olfactory receptor 11G2 (LOC651769), mRNA.					
Homo sapiens	RefSeq	NM_003480.2	ILMN_19364	MFAP5	NM_003480.2	NM_003480.2		8076	46359073	NM_003480.2	MFAP5	NP_003471.1	ILMN_1733415	0002570154	S	2739	TCACGAACTTGACCCTCCTACTCCACATTGCAACATTTCCATCAGACAGC	12	-	8798633-8798682	12p13.31b	Homo sapiens microfibrillar associated protein 5 (MFAP5), mRNA.	Extracellular matrix components occurring independently or along with elastin. Thought to have force-bearing functions in tendon. In addition to fibrillins, microfibrils may contain other associated proteins [goid 1527] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 8557636] [evidence TAS]	MAGP2; MP25	MAGP2; MP25
Homo sapiens	RefSeq	XM_001723160.1	ILMN_333822	LOC100132234	XM_001723160.1	XM_001723160.1		100132234	169206079	XM_001723160.1	LOC100132234	XP_001723212.1	ILMN_3274206	0001440561	M	1273	GCGGAGATACTTGAATACCAGGCCGAACGCTTCCCCAAGGCGTGTTGTAG				13q12.2b	PREDICTED: Homo sapiens similar to hCG2020055 (LOC100132234), mRNA.					
Homo sapiens	RefSeq	NR_002183.1	ILMN_15478	FAM10A4	NR_002183.1	NR_002183.1		145165	54400739	NR_002183.1	FAM10A4		ILMN_2098437	0003610348	S	827	GGCTCGAAAAGAGCATGAGAGAGCCCAGAGGGAGGAAGAAGCCAGATGAC	13	+	49644981-49645030	13q14.3a	Homo sapiens family with sequence similarity 10, member A4 pseudogene (FAM10A4), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NR_002183.1	ILMN_15478	FAM10A4	NR_002183.1	NR_002183.1		145165	54400739	NR_002183.1	FAM10A4		ILMN_2098433	0001170110	S	160	TCCTGAGGGAGTGGGTGGAGAGCATGGGAGGTACTGCTACTCAGAAAGCT	13	+	49644314-49644363	13q14.3a	Homo sapiens family with sequence similarity 10, member A4 pseudogene (FAM10A4), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NR_002183.1	ILMN_15478	FAM10A4	NR_002183.1	NR_002183.1		145165	54400739	NR_002183.1	FAM10A4		ILMN_1726308	0004050195	S	1055	GGTGGCCTTCCAGGATGTGGCTCAGAACCCAGCAAATATGTCAAAGTACC	13	+	49645209-49645258	13q14.3a	Homo sapiens family with sequence similarity 10, member A4 pseudogene (FAM10A4), non-coding RNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_173628.1	ILMN_17909	DNAHL1	NM_173628.1	NM_173628.1		284176	27734756	NM_173628.1	DNAHL1	NP_775899.1	ILMN_1667737	0006450136	S	1663	CTTGGATGGAAGAATTGCCAACCTCAACAAGCGCTACGCAGCAGTCAGGG	17	-	74051565-74051614	17q25.3b	Homo sapiens dynein, axonemal, heavy chain like 1 (DNAHL1), mRNA.				FLJ40457; MGC138489	FLJ40457; MGC138489
Homo sapiens	RefSeq	NM_205855.2	ILMN_3146	FAM180A	NM_205855.2	NM_205855.2		389558	142350212	NM_205855.2	FAM180A	NP_995327.1	ILMN_3245418	0000520274	S	1290	GGTACAGCAGTGTTAACTCCATGCATGTTGTGAAACAGACCCCCGGAACT	7	-	135065200-135065249	7q33c	Homo sapiens family with sequence similarity 180, member A (FAM180A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	Unigene	Hs.540005	ILMN_104893	HS.540005	Hs.540005		Hs.540005		8008576	AW874523			ILMN_1875581	0004040079	S	180	CCCAGCTCTTGGGTCCACATAGGGGAACAGATGGCAGCACCAGTAGGTCA	14	+	50986289-50986338		hp95c07.x1 NCI_CGAP_Ut7 Homo sapiens cDNA clone IMAGE:3117612 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001718652.1	ILMN_349091	LOC646021	XM_001718652.1	XM_001718652.1		646021	169212348	XM_001718652.1	LOC646021	XP_001718704.1	ILMN_3292026	0001710497	M	680	ACGGGCCCGTCAAGCTGCACCTGACAGGTATATTGAAAAGTCTGATTCAG				17q11.2c	PREDICTED: Homo sapiens similar to hCG1774990 (LOC646021), mRNA.					
Homo sapiens	RefSeq	XM_001718652.1	ILMN_349091	LOC646021	XM_001718652.1	XM_001718652.1		646021	169212348	XM_001718652.1	LOC646021	XP_001718704.1	ILMN_3215516	0004060551	A	427	CTAGTTGTGCAGCCCAGACCAAGGAAAGAGAAGTGGGAGGAGCGGGGAGC				17q11.2c	PREDICTED: Homo sapiens similar to hCG1774990 (LOC646021), mRNA.					
Homo sapiens	RefSeq	XM_938337.1	ILMN_6385	GABPAP	NR_002723.2	NR_002723.2		8327	126723481	NR_002723.2	GABPAP		ILMN_1685881	0005690435	S	120835	CGGATGCGGGGCCTGAAAAGCACAAATGCAGAACACACGGGACTGCGGCT				7q11.21b	Homo sapiens GA binding protein transcription factor, alpha subunit pseudogene (GABPAP) on chromosome 7.				E4TF1; GABPB1; E4TF1B	
Homo sapiens	RefSeq	Hs.566729	ILMN_6385	GABPAP	NR_002723.2	NR_002723.2		8327	126723481	NR_002723.2	GABPAP		ILMN_1882938	0007000576	S	126416	TGACCTCTGCTCTAAAAAGAGACACTACTCACTTCACACAAGGCTGTTAG				7q11.21b	Homo sapiens GA binding protein transcription factor, alpha subunit pseudogene (GABPAP) on chromosome 7.				E4TF1; GABPB1; E4TF1B	
Homo sapiens	RefSeq	XM_938321.1	ILMN_6385	GABPAP	NR_002723.2	NR_002723.2		8327	126723481	NR_002723.2	GABPAP		ILMN_1683173	0004590088	S	98408	TTCTAAATCCTGGAGAGCTGGTGTTAGGGTTTGATTTGGCCAGCTGCAAT				7q11.21b	Homo sapiens GA binding protein transcription factor, alpha subunit pseudogene (GABPAP) on chromosome 7.				E4TF1; GABPB1; E4TF1B	
Homo sapiens	RefSeq	XM_938298.1	ILMN_6385	GABPAP	NR_002723.2	NR_002723.2		8327	126723481	NR_002723.2	GABPAP		ILMN_1682403	0003290184	S	83204	GGCAGCCAAAGTACAAAGAGCGCCGAGGATTTCAGAAGATAGAAGCTCAC				7q11.21b	Homo sapiens GA binding protein transcription factor, alpha subunit pseudogene (GABPAP) on chromosome 7.				E4TF1; GABPB1; E4TF1B	
Homo sapiens	RefSeq	XM_936045.1	ILMN_6385	GABPAP	NR_002723.2	NR_002723.2		8327	126723481	NR_002723.2	GABPAP		ILMN_1685239	0006770274	S	31948	TGTGATCCTCCCACCTCAGTCTCCTGAGTGCCACCAATTGTGTGCCACCA				7q11.21b	Homo sapiens GA binding protein transcription factor, alpha subunit pseudogene (GABPAP) on chromosome 7.				E4TF1; GABPB1; E4TF1B	
Homo sapiens	Unigene	Hs.543446	ILMN_107034	HS.543446	Hs.543446		Hs.543446		4196333	AI383552			ILMN_1857101	0001260332	S	160	CACAATGCCTTTGGTGATAGCTCTTGCTGGGACATGTGGATGAATGCAGT	4	+	139230242-139230291		tc45d07.x1 Soares_total_fetus_Nb2HF8_9w Homo sapiens cDNA clone IMAGE:2067565 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002280.4	ILMN_179912	KRT35	NM_002280.4	NM_002280.4		3886	94538344	NM_002280.4	KRT35	NP_002271.3	ILMN_3245113	0006200504	S	1460	TTCTCAGAGCCTGTCACAAAGGCCGGCTGCCCCCAAAGGTCTCAACTCCT	17	-	39633102-39633151	17q21.2b	Homo sapiens keratin 35 (KRT35), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8823373] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	HA5; KRTHA5; hHa5; Ha-5	HA5; KRTHA5; hHa5; Ha-5
Homo sapiens	RefSeq	NM_000062.2	ILMN_166340	SERPING1	NM_000062.2	NM_000062.2		710	73858567	NM_000062.2	SERPING1	NP_000053.2	ILMN_1711272	0003450538	I	109	TGACCCTGGGGGACTCTCTACTCAGTCTGCACTGGAGCTGCCTGGTGACC	11	+	57121711-57121760	11q12.1a	Homo sapiens serpin peptidase inhibitor, clade G (C1 inhibitor), member 1 (SERPING1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3965505] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 3965505] [evidence EXP]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 2563376] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 2365061] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 1363816] [evidence TAS]	C1NH; HAE2; C1IN; HAE1; C1INH	C1NH; HAE2; C1IN; HAE1; C1INH
Homo sapiens	RefSeq	NM_178578.1	ILMN_2178	PSMF1	NM_178578.1	NM_178578.1		9491	30581142	NM_178578.1	PSMF1	NP_848693.1	ILMN_2291010	0002710047	I	63	TCTCAGCCACCCACAGCCCTCATAGGGCAGAATGGGACTCTTGCTGATGT	20	+	1042001-1042050	20p13e	Homo sapiens proteasome (prosome, macropain) inhibitor subunit 1 (PI31) (PSMF1), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [pmid 10764772] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10764772] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI];  [goid 8539] [pmid 10764772] [evidence NAS]	PI31	PI31
Homo sapiens	RefSeq	NM_014713.3	ILMN_25180	LAPTM4A	NM_014713.3	NM_014713.3		9741	41352690	NM_014713.3	LAPTM4A	NP_055528.1	ILMN_1745110	0007050494	S	1087	AGGTTAAGCAAGAGCAAAGTGCCATTGTTTGCCTTTAATTGGGGGGTGGG	2	-	20096176-20096225	2p24.1d	Homo sapiens lysosomal-associated protein transmembrane 4 alpha (LAPTM4A), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10942595] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		LAPTM4; KIAA0108; Mtrp; HUMORF13; MBNT	LAPTM4; KIAA0108; Mtrp; HUMORF13; MBNT
Homo sapiens	RefSeq	NM_001002919.2	ILMN_7398	FAM150B	NM_001002919.2	NM_001002919.2		285016	148228292	NM_001002919.2	FAM150B	NP_001002919.2	ILMN_3247082	0002570575	S	825	GGAGCAGCACACCAGGAGCCATGAGAAGTGCCTTGGAAACCAACAGGGAA	2	-	280084-280133	2p25.3g	Homo sapiens family with sequence similarity 150, member B (FAM150B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]	RGPG542; PRO1097	RGPG542; PRO1097
Homo sapiens	RefSeq	NM_033500.1	ILMN_23877	HK1	NM_033500.1	NM_033500.1		3098	15991832	NM_033500.1	HK1	NP_277035.1	ILMN_2280871	0004280414	I	474	GTGCACCACTGTGGTGGCGTGGAAAGATGGCAAAAAGAGCCCTGCGTGAT	10	+	70730571-70730596:70730597-70730620	10q21.3e	Homo sapiens hexokinase 1 (HK1), nuclear gene encoding mitochondrial protein, transcript variant 5, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9493266] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [pmid 3207429] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [pmid 3207429] [evidence TAS]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [pmid 9493266] [evidence EXP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HK1-tc; HKI; HK1-tb; HK1-ta; HXK1	HK1-tc; HKI; HK1-tb; HK1-ta; HXK1
Homo sapiens	RefSeq	NM_033500.1	ILMN_23877	HK1	NM_033500.1	NM_033500.1		3098	15991832	NM_033500.1	HK1	NP_277035.1	ILMN_2382990	0001660196	A	3761	CGTGTGTCCGTGGAACCAGTCCTAGCCGCGTGTGACAGTCTTGCATTCTG	10	+	70831441-70831490	10q21.3e	Homo sapiens hexokinase 1 (HK1), nuclear gene encoding mitochondrial protein, transcript variant 5, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9493266] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [pmid 3207429] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [evidence IEA]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [pmid 3207429] [evidence TAS]; Catalysis of the reaction: ATP + D-hexose = ADP + D-hexose 6-phosphate [goid 4396] [pmid 9493266] [evidence EXP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HK1-tc; HKI; HK1-tb; HK1-ta; HXK1	HK1-tc; HKI; HK1-tb; HK1-ta; HXK1
Homo sapiens	RefSeq	NM_001080842.1	ILMN_167462	LOC651503	NM_001080842.1	NM_001080842.1		651503	124249381	NM_001080842.1	LOC651503	NP_001074311.1	ILMN_2123719	0006760736	S	663	TGGCTTCATTGCTGTGGCTGTACTCAAGATCAAGTCTGCAGCAGGAAGAC	6	-	29338625-29338674	6p22.1a	Homo sapiens seven transmembrane helix receptor (LOC651503), mRNA.					
Homo sapiens	RefSeq	XM_937978.1	ILMN_39198	LOC648897	XM_937978.1	XM_937978.1		648897	89061424	XM_937978.1	LOC648897	XP_943071.1	ILMN_1770887	0005570133	S	286	ATCTTCCAGGTGGCCAAGGACGCAGGCATTGCCCTGCTCTCCATCACCCT				10p11.1d	PREDICTED: Homo sapiens similar to ATP-binding cassette sub-family D member 1 (Adrenoleukodystrophy protein) (ALDP) (LOC648897), mRNA.					
Homo sapiens	RefSeq	XM_001716843.1	ILMN_335872	C10ORF112	XM_001716843.1	XM_001716843.1		340895	169194610	XM_001716843.1	C10orf112	XP_001716895.1	ILMN_3230789	0006250709	I	2539	CCCAGGAGTATGGGAATATTAAAGGTACAAAAGGAAGCCAGAGATTTATG				10p12.33a	PREDICTED: Homo sapiens chromosome 10 open reading frame 112 (C10orf112), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_929728.1	ILMN_37431	LOC646779	XM_929728.1	XM_929728.1		646779	89052464	XM_929728.1	LOC646779	XP_934821.1	ILMN_1706404	0000940228	S	230	AGAGAATGGATGGCAAAGTGCTGTCTGAGACCAATGACACCAAATTGAGA	19	+	20939788-20939837	19p12d	PREDICTED: Homo sapiens similar to Keratin, type I cytoskeletal 18 (Cytokeratin-18) (CK-18) (Keratin-18) (K18) (LOC646779), mRNA.					
Homo sapiens	RefSeq	XM_933167.1	ILMN_46054	LOC645818	XM_933167.1	XM_933167.1		645818	88997870	XM_933167.1	LOC645818	XP_938260.1	ILMN_1676703	0007150041	S	280	CAAAGAAATTAAATCACTTGCCCAAGGTTACATAGCTGCCCCTGGCAAAC	6	-	147482294-147482306:147536422-147536458		PREDICTED: Homo sapiens hypothetical protein LOC645818 (LOC645818), mRNA.					
Homo sapiens	RefSeq	NM_004791.1	ILMN_22983	ITGBL1	NM_004791.1	NM_004791.1		9358	4758613	NM_004791.1	ITGBL1	NP_004782.1	ILMN_1653719	0005570129	S	2281	GGGGACAATGAAGACAAGCACACAGGAGGTAGAATATCAGAGTGGGGCTG	13	+	101166582-101166631	13q33.1a	Homo sapiens integrin, beta-like 1 (with EGF-like repeat domains) (ITGBL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10051402] [evidence TAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	OSCP; TIED	OSCP; TIED
Homo sapiens	RefSeq	NM_203434.1	ILMN_16273	IER5L	NM_203434.2	NM_203434.2		389792	148727369	NM_203434.2	IER5L	NP_982258.2	ILMN_1755620	0002710142	S	1272	AACTTGATCTCCATCTTTGGCTCCGGCTTCTCGGGGCTGGTGAGCCGACA	9	-	131939219-131939268	9q34.11c	Homo sapiens immediate early response 5-like (IER5L), mRNA.				MGC70833; bA247A12.2	MGC70833; bA247A12.2
Homo sapiens	RefSeq	NR_004428.1	ILMN_336532	EGOT	NR_004428.1	NR_004428.1		100126791	161333876	NR_004428.1	EGOT		ILMN_3247013	0005810674	S	1078	CAAATGTCTTCGGGGTTAAGTGTCAGTGAAGTGCAGTGGAAGGTAGGGGG	3	-	4791212-4791261		Homo sapiens eosinophil granule ontogeny transcript (non-protein coding) (EGOT), non-coding RNA.					
Homo sapiens	RefSeq	NM_002965.2	ILMN_25646	S100A9	NM_002965.2	NM_002965.2		6280	9845520	NM_002965.2	S100A9	NP_002956.1	ILMN_1750974	0005390220	S	228	CATCATGGAGGACCTGGACACAAATGCAGACAAGCAGCTGAGCTTCGAGG	1	+	151599776-151599825	1q21.3c	Homo sapiens S100 calcium binding protein A9 (calgranulin B) (S100A9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 3313057] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 3313057] [evidence TAS]; The movement of a leukocyte in response to an external stimulus [goid 30595] [evidence IEA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins [goid 45113] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 3313057] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 2149559] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]	CFAG; MAC387; 60B8AG; MIF; MRP14; CGLB; CAGB; LIAG; NIF; P14; L1AG	CFAG; MAC387; 60B8AG; MIF; MRP14; CGLB; CAGB; LIAG; NIF; P14; L1AG
Homo sapiens	Unigene	Hs.297475	ILMN_85247	HS.297475	Hs.297475		Hs.297475		11514779	BF448601			ILMN_1863621	0002140341	S	295	GATTCGTGAGAAGGAGGGAAGAGGTTGTTTCCAGAGTCGGCGGGCAGAGG	22	-	48180326-48180375		7n90c01.x1 NCI_CGAP_Ov18 Homo sapiens cDNA clone IMAGE:3571944 3, mRNA sequence					
Homo sapiens	RefSeq	XR_015237.2	ILMN_169099	LOC727896	XR_015237.2	XR_015237.2		727896	169212659	XR_015237.2	LOC727896		ILMN_3294861	0000940192	M	231	TCAAGCCCCTAAGACAGTAGACGCGATAAAAAGACCAAGCCCAGATGAAC	18	-	2936197-2936246	18p11.31e	PREDICTED: Homo sapiens misc_RNA (LOC727896), miscRNA.					
Homo sapiens	Unigene	Hs.552423	ILMN_110986	HS.552423	Hs.552423		Hs.552423		58552496	CX869322			ILMN_1859544	0002030133	S	655	TCACACAGGCGAGAACCTGGATGGAGGGGAAGATGGGCACCTGACAATGG					HESC4_34_D01.b1_A037 NIH_MGC_262 Homo sapiens cDNA clone IMAGE:7474204 3, mRNA sequence					
Homo sapiens	RefSeq	NM_214679.1	ILMN_6040	CLEC4M	NM_214679.1	NM_214679.1		10332	47607502	NM_214679.1	CLEC4M	NP_999844.1	ILMN_2322131	0006980035	A	1528	GCTTCAGAGACGAATAGTTGTTTCCCTGCTAGCCTCAGCCTCCATTGTGG	19	+	7739858-7739907	19p13.2e	Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 6, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11337487] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10072769] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 11337487] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 11337487] [evidence NAS]; The set of specific processes that generate the ability of an organism to cause disease in another [goid 9405] [pmid 11337487] [evidence NAS]; Cell recognition between cells, usually involving the formation of specialized cell junctions [goid 9988] [pmid 11337487] [evidence TAS]; Interactions, directly with the host cell macromolecular machinery, to allow virus replication [goid 19048] [pmid 11337487] [evidence TAS]; Any process involved in the specific binding of a viral antireceptor to a cell surface receptor [goid 19062] [pmid 11337487] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 11337487] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [pmid 11337487] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The directed movement of a virion within a host cell from one location to another [goid 46795] [pmid 11337487] [evidence TAS]; The directed movement of a peptide antigen into, out of, within or between cells. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein [goid 46968] [pmid 11337487] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11257134] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 11337487] [evidence NAS]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [evidence IEA]; Combining with ICAM-3, intercellular adhesion molecule 3, to initiate a change in cell activity. ICAM-3, or CD50, are constitutively expressed on monocytes, granulocytes and lymphocytes; on physiological stimulation, they become transiently phosphorylated on serine residues [goid 30369] [pmid 11257134] [evidence NAS]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [pmid 11337487] [evidence NAS]; Interacting selectively with a virion, either by binding to components of the capsid or the viral envelope [goid 46790] [pmid 11337487] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	MGC129964; DCSIGNR; DC-SIGN2; HP10347; CD209L; L-SIGN; MGC47866; LSIGN; DC-SIGNR; CD299	MGC129964; DCSIGNR; DC-SIGN2; HP10347; CD209L; L-SIGN; MGC47866; LSIGN; DC-SIGNR; CD299
Homo sapiens	RefSeq	Hs.216363	ILMN_175848	LOC729766	XM_001131228.1	XM_001131228.1		729766	113408781	XM_001131228.1	LOC729766	XP_001131228.1	ILMN_1825242	0002760039	S	242	TCCCTCTCACAAAATAACTCAGCCATGATGTTCACGGTGTTGATGCCTCC	1	+	76257483-76257532	1p31.1g	PREDICTED: Homo sapiens hypothetical LOC729766 (LOC729766), mRNA.					
Homo sapiens	RefSeq	XM_942908.1	ILMN_137788	CRSP2	XM_942908.1	XM_942908.1		9282	89060689	XM_942908.1	CRSP2	XP_948001.1	ILMN_1651637	0000060435	I	1124	TGCCCCCATCTCCCCCACCCTTTTTGAGGTGCAGATAGGGCTGGAGAATA				Xp11.4b	PREDICTED: Homo sapiens cofactor required for Sp1 transcriptional activation, subunit 2, 150kDa, transcript variant 3 (CRSP2), mRNA.					
Homo sapiens	RefSeq	XR_019429.2	ILMN_163704	LOC389156	XR_019429.2	XR_019429.2		389156	169166000	XR_019429.2	LOC389156		ILMN_3210171	0002680612	A	1	GGAGCTTTTGGACGGAACCGCCATCTTCCAGTAATTCGCCAAAATGACAA				3q24c	PREDICTED: Homo sapiens misc_RNA (LOC389156), miscRNA.					
Homo sapiens	RefSeq	NM_000448.1	ILMN_166325	RAG1	NM_000448.1	NM_000448.1		5896	4557840	NM_000448.1	RAG1	NP_000439.1	ILMN_1738818	0006280739	S	6376	GAGAAAATTCAGGTACCAGGATGCAATGGATTTATTTGATTCAGGGGACC	11	+	36557682-36557731	11p12d	Homo sapiens recombination activating gene 1 (RAG1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [pmid 9630231] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9630231] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; The process by which immune receptor V, D, and J, or V and J gene segments, depending on the specific receptor, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33151] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9630231] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC43321; RNF74	MGC43321; RNF74
Homo sapiens	RefSeq	XM_936545.1	ILMN_164391	LOC647481	XM_001128566.1	XM_001128566.1		647481	113411083	XM_001128566.1	LOC647481	XP_001128566.1	ILMN_1687041	0000430477	S	420	CTACACGCTGCTTGTTTCCATGGCTCCCCTCACCAATGAAATCCGGCCCA	1	+	142512307-142512356	1q21.1a	PREDICTED: Homo sapiens similar to F33H2.2 (LOC647481), mRNA.					
Homo sapiens	RefSeq	NM_006203.3	ILMN_164639	PDE4D	NM_006203.3	NM_006203.3		5144	46361981	NM_006203.3	PDE4D	NP_006194.2	ILMN_1791483	0001770114	S	5743	GTACTTCTTGCCAGGGAGCAGCACTGCATGTGTGATGGTTGTTTGCCATC	5	-	58302551-58302600	5q11.2h-q12.1a	Homo sapiens phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) (PDE4D), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9371713] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [pmid 9371713] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6198] [evidence IEA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the reaction: adenosine 3',5'-cyclic phosphate + H2O = adenosine 5'-phosphate [goid 4115] [pmid 9371713] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSPDE4D; STRK1; DPDE3; PDE4DN2	HSPDE4D; STRK1; DPDE3; PDE4DN2
Homo sapiens	RefSeq	XM_933117.1	ILMN_39826	LOC643441	XM_933117.1	XM_933117.1		643441	88942967	XM_933117.1	LOC643441	XP_938210.1	ILMN_1751558	0003710474	I	400	CTAATACATGTGCTTTACAATTTACAAAGCTTTTTCTCATAAACTCGTTT	1	-	113544593-113544642	1p13.2c	PREDICTED: Homo sapiens hypothetical protein LOC643440, transcript variant 1 (LOC643441), mRNA.					
Homo sapiens	RefSeq	XM_928930.1	ILMN_38942	LOC645963	XM_928930.1	XM_928930.1		645963	89041341	XM_928930.1	LOC645963	XP_934023.1	ILMN_1766280	0003940671	S	1013	CACTGCTTGATTCCTCGTCACTCACACACGGAGCCTTCGGGGATGGCCTT	17	+	25908685-25908734		PREDICTED: Homo sapiens similar to ubiquitin specific protease 6 (LOC645963), mRNA.					
Homo sapiens	RefSeq	NM_000677.2	ILMN_180342	ADORA3	NM_000677.3	NM_000677.3		140	130978679	NM_000677.3	ADORA3	NP_000668.1	ILMN_1730710	0006580482	I	1756	CCTTCAGATTCCCCATCAACAAACACTTGAGGGCCTGTATGCCTGGGCCA	1	-	112042490-112042539	1p13.2d	Homo sapiens adenosine A3 receptor (ADORA3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8399349] [evidence TAS]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9164961] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9380026] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8399349] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 9380026] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9837869] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	AD026; RP11-552M11.7; A3AR; bA552M11.5	AD026; RP11-552M11.7; A3AR; bA552M11.5
Homo sapiens	RefSeq	XM_035299.7	ILMN_168646	ZSWIM6	XM_035299.8	XM_035299.8		57688	113416560	XM_035299.8	ZSWIM6	XP_035299.7	ILMN_1777061	0000770152	A	5246	TGGTGCAAAAGTTGTCCAGTGTCTCTTGTTCCCTTCACTAGAGAACATGC	5	+	60877457-60877506	5q12.1b	PREDICTED: Homo sapiens zinc finger, SWIM-type containing 6 (ZSWIM6), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_182619.1	ILMN_21133	LOC348174	NM_182619.1	NM_182619.1		348174	33504574	NM_182619.1	LOC348174	NP_872425.1	ILMN_1792437	0004040240	S	74	GAGGACACTGTCCCAGCCAGGACACGGCCATCGGTCACTAATCTGCAGCA	16	+	68542384-68542433	16q22.1e	Homo sapiens secretory protein LOC348174 (LOC348174), mRNA.					
Homo sapiens	RefSeq	NM_014518.1	ILMN_10763	ZNF229	NM_014518.2	NM_014518.2		7772	104294876	NM_014518.2	ZNF229	NP_055333.2	ILMN_1669506	0001510253	S	4594	CAGGCATATGTATGCAATGGAAAGCCACTAGAAATCTTCAGGCACACAGA	19	-	49622586-49622635	19q13.31b	Homo sapiens zinc finger protein 229 (ZNF229), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ34222	FLJ34222
Homo sapiens	RefSeq	XM_929673.1	ILMN_32423	DKFZP434I0714	XM_929673.1	XM_929673.1		54553	88976839	XM_929673.1	DKFZP434I0714	XP_934766.1	ILMN_1741621	0002370195	A	3488	GAGGGTTACACAGTCACACTAGGTATATATGAGTCCCATTGCTCCACACC	4	+	153679848-153679897	4q31.3c	PREDICTED: Homo sapiens hypothetical protein DKFZP434I0714 (DKFZP434I0714), mRNA.					
Homo sapiens	RefSeq	NM_005646.2	ILMN_14414	TARBP1	NM_005646.3	NM_005646.3		6894	110825987	NM_005646.3	TARBP1	NP_005637.3	ILMN_1803036	0002230201	S	4753	GAAATTCCTCAACAGGGCATTATCCGCTCCCTGAATGTCCATGTGAGTGG	1	-	234527386-234527435	1q42.2c	Homo sapiens TAR (HIV-1) RNA binding protein 1 (TARBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8846792] [evidence TAS]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8846792] [evidence TAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8846792] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule [goid 8173] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TRP-185; FLJ30482; TRP185; TRM3	TRP-185; FLJ30482; TRP185; TRM3
Homo sapiens	RefSeq	NM_007199.1	ILMN_25857	IRAK3	NM_007199.1	NM_007199.1		11213	6005791	NM_007199.1	IRAK3	NP_009130.1	ILMN_1661695	0002360719	S	2181	GTCCTCTCCATCATCCTCAGTGTGAGTCCTCAGAGCCTCCATCTGCCAAG	12	+	64928545-64928594	12q14.3b	Homo sapiens interleukin-1 receptor-associated kinase 3 (IRAK3), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10383454] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISS]; Any process that modulates the frequency, rate or extent of protein complex disassembly, the disaggregation of a protein complex into its constituent components [goid 43244] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 10383454] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10383454] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10383454] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 10383454] [evidence IPI]	IRAKM; ASRT5; IRAK-M	IRAKM; ASRT5; IRAK-M
Homo sapiens	RefSeq	XM_941431.1	ILMN_45763	LOC652101	XM_941431.1	XM_941431.1		652101	88971272	XM_941431.1	LOC652101	XP_946524.1	ILMN_1777278	0004610204	S	529	GCTTCCTGTGGCCATTCAGAAAATGGAAAACAGAATGTGCAGTGTGGTGC					PREDICTED: Homo sapiens hypothetical protein LOC652101 (LOC652101), mRNA.					
Homo sapiens	RefSeq	NM_002636.3	ILMN_18332	PHF1	NM_024165.1	NM_024165.1		5252	13435396	NM_024165.1	PHF1	NP_077084.1	ILMN_1746968	0007610273	A	1926	TGCCTCTGCCCAGCTCCCCATTCACACACACCGGCACTTTCATACCCTGA	6	+	33491860-33491909	6p21.32a	Homo sapiens PHD finger protein 1 (PHF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9545646] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PHF2	PHF2
Homo sapiens	RefSeq	NM_024165.1	ILMN_18332	PHF1	NM_024165.1	NM_024165.1		5252	13435396	NM_024165.1	PHF1	NP_077084.1	ILMN_1752877	0005310240	I	1484	TAACCAGAGTTACCAGGGCAGCAGCGGCTACAACTTCCGGCCCACAGATG	6	+	33491019-33491068	6p21.32a	Homo sapiens PHD finger protein 1 (PHF1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9545646] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PHF2	PHF2
Homo sapiens	RefSeq	XM_927188.1	ILMN_35873	LOC643927	XM_927188.1	XM_927188.1		643927	89030162	XM_927188.1	LOC643927	XP_932281.1	ILMN_1653744	0004120368	S	15	AAGCTCCACGCAGGCCTGTAGAGCACAGCAGGGTCTGGCTCCTGTGGGCA	9	+	13513-13562		PREDICTED: Homo sapiens similar to NADPH dependent diflavin oxidoreductase 1 (LOC643927), mRNA.					
Homo sapiens	RefSeq	NM_015869.3	ILMN_22381	PPARG	NM_015869.4	NM_015869.4		5468	116284371	NM_015869.4	PPARG	NP_056953.2	ILMN_1687612	0000380255	I	69	GCAAACCCCTATTCCATGCTGTTATGGGTGAAACTCTGGGAGATTCTCCT	3	+	12368069-12368091:12368092-12368118	3p25.2a-p25.1d	Homo sapiens peroxisome proliferator-activated receptor gamma (PPARG), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence ISS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9568716] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9568716] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 10973253] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 10622252] [evidence IMP]; The directed movement of long-chain fatty acids into, out of, within or between cells. A long-chain fatty acid is an aliphatic compound with a terminal carboxyl group and with a chain length greater than C12 [goid 15909] [evidence ISS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [pmid 9568716] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [pmid 10622252] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus [goid 33993] [pmid 9568715] [evidence ISS]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [pmid 10622252] [evidence IMP]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [pmid 9568716] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 17145956] [evidence TAS]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence ISS]; The chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors, cell surface proteins that mediate the endocytosis of low-density lipoprotein by cells [goid 45713] [pmid 9568716] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [pmid 9568716] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [pmid 12588810] [evidence TAS]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [pmid 9113987] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low density lipoprotein stimulus [goid 55098] [pmid 9568716] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with a prostaglandin (PG) to initiate a change in cell activity [goid 4955] [pmid 9568715] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 9113987] [evidence IDA]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 10622252] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with a transcription activator, any protein whose activity is required to initiate or upregulate transcription [goid 33613] [pmid 10622252] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a retinoid X receptor [goid 46965] [pmid 9568715] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9744270] [evidence TAS]; Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [pmid 9568715] [evidence ISS]	NR1C3; PPARG1; PPARG2	NR1C3; PPARG1; PPARG2; HUMPPARG
Homo sapiens	RefSeq	NM_138712.2	ILMN_22381	PPARG	NM_015869.4	NM_015869.4		5468	116284371	NM_015869.4	PPARG	NP_056953.2	ILMN_1800225	0000830019	A	1618	CCTGAGCCACTGCCAACATTTCCCTTCTTCCAGTTGCACTATTCTGAGGG	3	+	12433339-12433388	3p25.2a-p25.1d	Homo sapiens peroxisome proliferator-activated receptor gamma (PPARG), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence ISS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9568716] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9568716] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 10973253] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 10622252] [evidence IMP]; The directed movement of long-chain fatty acids into, out of, within or between cells. A long-chain fatty acid is an aliphatic compound with a terminal carboxyl group and with a chain length greater than C12 [goid 15909] [evidence ISS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [pmid 9568716] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [pmid 10622252] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus [goid 33993] [pmid 9568715] [evidence ISS]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [pmid 10622252] [evidence IMP]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [pmid 9568716] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 17145956] [evidence TAS]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence ISS]; The chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors, cell surface proteins that mediate the endocytosis of low-density lipoprotein by cells [goid 45713] [pmid 9568716] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [pmid 9568716] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [pmid 12588810] [evidence TAS]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [pmid 9113987] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low density lipoprotein stimulus [goid 55098] [pmid 9568716] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with a prostaglandin (PG) to initiate a change in cell activity [goid 4955] [pmid 9568715] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 9113987] [evidence IDA]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 10622252] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with a transcription activator, any protein whose activity is required to initiate or upregulate transcription [goid 33613] [pmid 10622252] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a retinoid X receptor [goid 46965] [pmid 9568715] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9744270] [evidence TAS]; Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [pmid 9568715] [evidence ISS]	NR1C3; PPARG1; PPARG2	NR1C3; PPARG1; PPARG2; HUMPPARG
Homo sapiens	RefSeq	NM_014269.3	ILMN_175574	ADAM29	NM_014269.3	NM_014269.3		11086	73765551	NM_014269.3	ADAM29	NP_055084.3	ILMN_2194158	0001770672	S	3000	CCCAGAGTCAACCTCCTGTGACACCCTCCCAGAGGCAACCTCAGTTGATG	4	+	176135631-176135680	4q34.1d	Homo sapiens ADAM metallopeptidase domain 29 (ADAM29), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10512762] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10512762] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	svph1	svph1
Homo sapiens	RefSeq	NM_001080521.1	ILMN_183301	RASSF10	NM_001080521.1	NM_001080521.1		644943	122937479	NM_001080521.1	RASSF10	NP_001073990.1	ILMN_2149547	0001400731	S	608	AGAAGTGGCGCGGCTTTGAGCGCATCCTCCCCAACAAGACGCGCATCTTG	11	+	12987983-12988032	11p15.2c	Homo sapiens Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 (RASSF10), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]			
Homo sapiens	RefSeq	XM_001722839.1	ILMN_349513	LOC653117	XM_001722839.1	XM_001722839.1		653117	169167334	XM_001722839.1	LOC653117	XP_001722891.1	ILMN_3292448	0000940379	M	662	CGGGATATGTTGATAGAGACATCCAGCTACTCTGTCAGTCCTCGGGCTGG	5	+	76398-76447		PREDICTED: Homo sapiens similar to B7h.4 (LOC653117), mRNA.					
Homo sapiens	RefSeq	NM_003416.1	ILMN_12950	ZNF7	NM_003416.1	NM_003416.1		7553	4508034	NM_003416.1	ZNF7	NP_003407.1	ILMN_2137066	0003400070	S	2051	AGGGCCCAGTGGTTTTACGAATATGGGAATGCCCTGGAAGGGTCCACCTT	8	+	146039107-146039156	8q24.3h	Homo sapiens zinc finger protein 7 (ZNF7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 2106481] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2106481] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HF.16; KOX4; zf30; FLJ38706	HF.16; KOX4; zf30; FLJ38706
Homo sapiens	RefSeq	NM_001033045.2	ILMN_165492	GPR155	NM_001033045.2	NM_001033045.2		151556	74315999	NM_001033045.2	GPR155	NP_001028217.1	ILMN_1709194	0004210538	I	283	GTGAACTGAATGTGCAAAGTCCCTGTGGCACAAAGTCCCTGGGGCCAGTG	2	-	175347765-175347814	2q31.1g	Homo sapiens G protein-coupled receptor 155 (GPR155), transcript variant 9, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		FLJ31819; PGR22; DEP.7; DEPDC3; FLJ39346	DEPDC3; FLJ31819; PGR22; DEP.7; FLJ39346
Homo sapiens	RefSeq	XM_941345.1	ILMN_33771	LOC388946	XM_941345.2	XM_941345.2		388946	113413808	XM_941345.2	LOC388946	XP_946438.2	ILMN_1681062	0002710102	S	728	TGCGCATGGAGTTCGAGCTCACGCGGCTCAAGTACCTGCATGAGAAGATG				2p21b	PREDICTED: Homo sapiens hypothetical LOC388946 (LOC388946), mRNA.					
Homo sapiens	RefSeq	XM_926578.1	ILMN_41074	LOC643216	XM_926578.1	XM_926578.1		643216	89028238	XM_926578.1	LOC643216	XP_931671.1	ILMN_1740878	0002480356	S	61	GGTCCTTCAGAAGGGATTCCACAGGAAGGCACTGTTGTCACAGGAGATGA	8	+	97100332-97100381		PREDICTED: Homo sapiens hypothetical protein LOC643216 (LOC643216), mRNA.					
Homo sapiens	RefSeq	XR_016124.1	ILMN_174567	LOC646214	XR_016124.1	XR_016124.1		646214	113425025	XR_016124.1	LOC646214		ILMN_3243351	0004120044	S	6261	GGCACTTCCCTTCTAAGTCAAAGACCATTCTCACTGACTATGTGCCAAGG	15	-	19187806-19187855	15q11.2a	PREDICTED: Homo sapiens misc_RNA (LOC646214), miscRNA.					
Homo sapiens	RefSeq	XM_940124.1	ILMN_137939	BCL7C	XM_940124.1	XM_940124.1		9274	89040786	XM_940124.1	BCL7C	XP_945217.1	ILMN_1701165	0005820520	I	2488	GGCCTGCTGTGGCACTGCTCAACAGAAAGGGCCCAGTTATTCTCCATGAC				16p11.2c	PREDICTED: Homo sapiens B-cell CLL/lymphoma 7C, transcript variant 2 (BCL7C), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]			
Homo sapiens	Unigene	Hs.559981	ILMN_113976	HS.559981	Hs.559981		Hs.559981		19758697	BQ023418			ILMN_1875080	0003190754	S	472	TGAGAGACAGATGAGGAGGCTAAGGGAGAAAGACTCTGGGGAAGTGTCCC	11	-	75948707-75948756		UI-1-BB1p-avd-b-12-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-avd-b-12-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_114973.5	ILMN_41826	EPHA6	XM_114973.5	XM_114973.5		285220	88965488	XM_114973.5	EPHA6	XP_114973.5	ILMN_1671636	0006380687	I	1689	GCACTCACCCCCTCCAGCGGTGGAAATGTGGAGAACCCGAGCTCGCTCTT	3	+	98015561-98015595:98016081-98016095	3q11.2c	PREDICTED: Homo sapiens EPH receptor A6 (EPHA6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_016357.3	ILMN_6603	LIMA1	NM_016357.3	NM_016357.3		51474	54792736	NM_016357.3	LIMA1	NP_057441.1	ILMN_1704369	0004880537	S	3173	CCTTCGGGATCACTGTCCCCCATCTTCCGTGTTAGAGCAAAGTGAAGAGT	12	-	48856264-48856313	12q13.13a	Homo sapiens LIM domain and actin binding 1 (LIMA1), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [pmid 10618726] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 10618726] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 11256614] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of actin depolymerization [goid 30835] [pmid 12566430] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [pmid 12566430] [evidence IDA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [pmid 12566430] [evidence IDA]	Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [pmid 12566430] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 12566430] [evidence IDA]	SREBP3; EPLIN; FLJ38853; MGC131726	SREBP3; EPLIN; FLJ38853; MGC131726
Homo sapiens	RefSeq	NM_005507.2	ILMN_4867	CFL1	NM_005507.2	NM_005507.2		1072	49472823	NM_005507.2	CFL1	NP_005498.1	ILMN_1705617	0004250458	S	1044	TCCCCACCTGGTCCTCCCCCTTCCCATGCTGCCAACTTCTAACCGCAATA	11	-	65622448-65622497	11q13.1d	Homo sapiens cofilin 1 (non-muscle) (CFL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16130169] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IEA]; The process by which the edges of the neural plate thicken and move up to form a U-shaped structure called the neural groove [goid 1842] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IEA]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 10436159] [evidence TAS]; The specification and formation of anisotropic intracellular organization or cell growth patterns [goid 30010] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of actin depolymerization [goid 30836] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12361576] [evidence IPI]	CFL	CFL
Homo sapiens	Unigene	Hs.563267	ILMN_116168	HS.563267	Hs.563267		Hs.563267		6138591	AW135045			ILMN_1823486	0003390593	S	158	TGTCCTCCCGCCCGGGGCCCTGAGCTGATTCATACATCATGGCTCTTTGA	5	+	151020516-151020565		UI-H-BI1-abt-g-02-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2713131 3, mRNA sequence					
Homo sapiens	RefSeq	NM_033355.3	ILMN_637	CASP8	NM_033355.3	NM_033355.3		841	122056469	NM_033355.3	CASP8	NP_203519.1	ILMN_2377733	0001050092	A	948	GCACGGGAGAAAGTGCCCAAACTTCACAGCATTAGGGACAGGAATGGAAC	2	+	201849873-201849922	2q33.1f	Homo sapiens caspase 8, apoptosis-related cysteine peptidase (CASP8), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 10891503] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8681376] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12804595] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10894160] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12887920] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9721089] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10891503] [evidence TAS]; A heterodimer associated with 90S and 66S preribosomes in the nucleolus; involved in ribosomal large subunit biogenesis [goid 30690] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system [goid 1841] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 12888622] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 11048727] [evidence EXP]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 8681376] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11717445] [evidence IPI]	MGC78473; MACH; MCH5; ALPS2B; FLICE; CAP4	MGC78473; MACH; MCH5; ALPS2B; FLICE; CAP4
Homo sapiens	RefSeq	NM_016424.3	ILMN_11116	CROP	NM_016424.3	NM_016424.3		51747	52426741	NM_016424.3	CROP	NP_057508.2	ILMN_1728180	0003140047	I	2768	ACTTAGGCAAGCATACACAGGCACATGGCTTTAAGAACCACACTGATGCC	17	+	46184373-46184422	17q21.33b	Homo sapiens cisplatin resistance-associated overexpressed protein (CROP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12565863] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10754390] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10754390] [evidence IMP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 10631324] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [pmid 10631324] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	LUC7A; OA48-18	LUC7A; OA48-18
Homo sapiens	RefSeq	NM_001129.3	ILMN_179474	AEBP1	NM_001129.3	NM_001129.3		165	53692188	NM_001129.3	AEBP1	NP_001120.3	ILMN_1736178	0006580711	S	3868	TCAGCACATGGAAGGCCCCTGGTATGGACACTGAAAGGAAGGGCTGGTCC	7	+	44120471-44120520	7p13d	Homo sapiens AE binding protein 1 (AEBP1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ33612; ACLP	FLJ33612; ACLP
Homo sapiens	RefSeq	NM_177533.2	ILMN_7938	NUDT14	NM_177533.2	NM_177533.2		256281	37594466	NM_177533.2	NUDT14	NP_803877.2	ILMN_1669788	0000110092	S	662	CCGGACATCCCCAAGACCCTCGGCGTCATCTTTGGTGTCTCATGGTTCCT	14	-	104710454-104710503	14q32.33c	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 14 (NUDT14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12620389] [evidence IPI]; Catalysis of the reaction: UDP-sugar + H2O = UMP + sugar 1-phosphate [goid 8768] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]	UGPP	UGPP
Homo sapiens	RefSeq	XM_931058.1	ILMN_37141	LOC642749	XM_931058.1	XM_931058.1		642749	88967378	XM_931058.1	LOC642749	XP_936151.1	ILMN_1692263	0003130333	I	61	TTCGAGGGGCTACGGGTGGAGGGGCGAATGGAGGAGCTCTCTGGGGCGAT	3	-	197203216-197203265		PREDICTED: Homo sapiens similar to Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial precursor (Fp) (Flavoprotein subunit of complex II), transcript variant 2 (LOC642749), mRNA.					
Homo sapiens	RefSeq	NM_021209.3	ILMN_15983	NLRC4	NM_021209.3	NM_021209.3		58484	40788014	NM_021209.3	NLRC4	NP_067032.3	ILMN_1796976	0001050020	S	2887	ATGAACGTGCTAGAACAGCTCACCGCACTGATGCTGCCCTGGGGCTGTGA	2	-	32460579-32460628	2p22.3e	Homo sapiens NLR family, CARD domain containing 4 (NLRC4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 15107016] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 15030775] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [pmid 15107016] [evidence IDA]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [pmid 15107016] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 11374873] [evidence IMP]; Any process that modulates the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43281] [evidence IEA]; The regulated release of interleukin 1 beta from a cell or group of cells [goid 50702] [pmid 15882992] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 15882992] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11472070] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 15882992] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15107016] [evidence IDA]	CLAN1; CLANB; CLANA; IPAF; CLAN; CLR2.1; CLANC; CLAND; CARD12	CLAN; CLR2.1; CLAND; CLAN1; CLANB; CLANA; IPAF; CLANC; CARD12
Homo sapiens	RefSeq	XM_001717968.1	ILMN_346345	FLJ31306	XM_001717968.1	XM_001717968.1		379025	169207042	XM_001717968.1	FLJ31306	XP_001718020.1	ILMN_3189585	0000650215	A	2796	AACAGACCATCAGAAGAGAACAATGGTACAGAGCAGGGGTCAGCAGATGG	14	-	57802084-57802133	14q23.1b	PREDICTED: Homo sapiens hypothetical protein FLJ31306 (FLJ31306), mRNA.					
Homo sapiens	RefSeq	XM_001717968.1	ILMN_346345	FLJ31306	XM_001717968.1	XM_001717968.1		379025	169207042	XM_001717968.1	FLJ31306	XP_001718020.1	ILMN_3266054	0005130193	M	2516	CGCCTGCAGCTTTTTCCAAATAGTTCATGGGGGAGGGGGATGTGTAAGTG	14	-	57802364-57802413	14q23.1b	PREDICTED: Homo sapiens hypothetical protein FLJ31306 (FLJ31306), mRNA.					
Homo sapiens	RefSeq	NM_152285.2	ILMN_11748	ARRDC1	NM_152285.2	NM_152285.2		92714	65288282	NM_152285.2	ARRDC1	NP_689498.1	ILMN_1661492	0004850646	S	1169	TGCCTCACACCCGCTGCACCCTCCCTTGTGCATTTCAACAGGTGCCACTG	9	+	139629131-139629180	9q34.3f	Homo sapiens arrestin domain containing 1 (ARRDC1), mRNA.				RP11-48C7.5; MGC40555	RP11-48C7.5; MGC40555
Homo sapiens	RefSeq	NR_023371.1	ILMN_363575	RN5S9	NR_023371.1	NR_023371.1		100169760	189571622	NR_023371.1	RN5S9		ILMN_3234762	0002570220	S	37	GTCTGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGACGG	1	-	228763927-228763976		Homo sapiens RNA, 5S ribosomal 9 (RN5S9), ribosomal RNA.					
Homo sapiens	RefSeq	NM_004741.1	ILMN_22590	NOLC1	NM_004741.1	NM_004741.1		9221	4758859	NM_004741.1	NOLC1	NP_004732.1	ILMN_2184640	0005960132	S	2216	ACCTGGGAACCCTCAGGTCTCTAGGTGAGGGTCTTGATGAGGACAGAAGT	10	+	103912081-103912130	10q24.32a	Homo sapiens nucleolar and coiled-body phosphoprotein 1 (NOLC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 7657714] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7657714] [evidence TAS]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [pmid 7657714] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 7657714] [evidence TAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 7657714] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	P130; NOPP140; KIAA0035; NOPP130; NS5ATP13	P130; NOPP140; KIAA0035; NOPP130; NS5ATP13
Homo sapiens	RefSeq	NM_003526.2	ILMN_28053	HIST1H2BC	NM_003526.2	NM_003526.2		8347	21166388	NM_003526.2	HIST1H2BC	NP_003517.2	ILMN_1680937	0000450753	S	351	GGCCGTCACCAAGTACACCAGCTCCAAGTAAACATTCCAAGTAAGCGTCT	6	-	26231711-26231730:26231731-26231760	6p22.1d	Homo sapiens histone cluster 1, H2bc (HIST1H2BC), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [pmid 422550] [evidence NAS]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [pmid 9119399] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 422550] [evidence NAS]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 9119399] [evidence NAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9119399] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 422550] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	H2B/l; MGC104246; dJ221C16.3; H2BFL; H2B.1	H2B/l; MGC104246; dJ221C16.3; H2BFL; H2B.1
Homo sapiens	RefSeq	NM_002913.3	ILMN_17825	RFC1	NM_002913.3	NM_002913.3		5981	32528305	NM_002913.3	RFC1	NP_002904.3	ILMN_1792986	0004230414	S	4342	AGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGCGTGGGGGGCTGC	4	-	39289567-39289616	4p14c	Homo sapiens replication factor C (activator 1) 1, 145kDa (RFC1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [pmid 9488738] [evidence IDA]	The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 8248204] [evidence TAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 8954124] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16438930] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8248204] [evidence TAS]; Increases the activity of an enzyme [goid 8047] [pmid 8954124] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RFC140; A1; RECC1; PO-GA; MHCBFB; MGC51786; RFC	RFC140; A1; RECC1; PO-GA; MHCBFB; MGC51786; RFC
Homo sapiens	RefSeq	NM_001079538.1	ILMN_165057	XAGE2B	NM_001079538.1	NM_001079538.1		728242	118600999	NM_001079538.1	XAGE2B	NP_001073006.1	ILMN_2190541	0004850020	S	54	GCCTCCTGAGCTGATTGGGGCTATGCTTGAACCCACTGATGAAGAGCCTA	X	+	52113211-52113238:52113710-52113731	Xp11.22b	Homo sapiens X antigen family, member 2B (XAGE2B), mRNA.					
Homo sapiens	RefSeq	NM_001075099.1	ILMN_167150	SKAP1	NM_001075099.1	NM_001075099.1		8631	115527075	NM_001075099.1	SKAP1	NP_001068567.1	ILMN_2335604	0005870192	A	968	AGTGGCACTCGACGAAAAGGAGACTATGCCAGTTACTACCAGGGCCTATG	17	-	46239900-46239928:46247971-46247991	17q21.32b-q21.32c	Homo sapiens src kinase associated phosphoprotein 1 (SKAP1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9195899] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9195899] [evidence TAS]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [pmid 9195899] [evidence TAS]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9195899] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9195899] [evidence TAS]	SCAP1; SKAP55	SCAP1; SKAP55
Homo sapiens	RefSeq	NM_002699.3	ILMN_668	POU3F1	NM_002699.3	NM_002699.3		5453	110624764	NM_002699.3	POU3F1	NP_002690.3	ILMN_2086981	0001050097	S	2409	AACCAGCTGTAGAAATAAGCCGTTCCCTGAGAACCCTCCGCCTGATTCCC	1	-	38509992-38510041	1p34.3b	Homo sapiens POU class 3 homeobox 1 (POU3F1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9242494] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8451175] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8662541] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 9242494] [evidence IDA]	OCT6; SCIP; OTF6	OCT6; SCIP; OTF6
Homo sapiens	RefSeq	NM_201432.1	ILMN_17718	GAS7	NM_201433.1	NM_201433.1		8522	41406079	NM_201433.1	GAS7	NP_958839.1	ILMN_1745994	0001070435	A	7765	GACCGGAAGCAACCCCTTCACAGACACGAGCACATCGGCAAACCCTATGA	17	-	9814868-9814917	17p13.1b	Homo sapiens growth arrest-specific 7 (GAS7), transcript variant c, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9736752] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9736752] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC1348; MLL/GAS7; KIAA0394	MGC1348; MLL/GAS7; KIAA0394
Homo sapiens	RefSeq	NM_201433.1	ILMN_17718	GAS7	NM_201433.1	NM_201433.1		8522	41406079	NM_201433.1	GAS7	NP_958839.1	ILMN_1790080	0001300725	I	289	AGAAGGAGGACGGGCTCCGTGGCTGGTTCCCGGCGAGCTACGTGCAGTTG	17	-	10101530-10101579	17p13.1b	Homo sapiens growth arrest-specific 7 (GAS7), transcript variant c, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9736752] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9736752] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC1348; MLL/GAS7; KIAA0394	MGC1348; MLL/GAS7; KIAA0394
Homo sapiens	RefSeq	XM_938493.1	ILMN_42281	LOC649415	XM_938493.1	XM_938493.1		649415	89061507	XM_938493.1	LOC649415	XP_943586.1	ILMN_1681605	0005220673	S	1015	CATTCATCTGCACTTCCCTCTGGCCTGCTGCTGGATGAGCTCCTGGTGAG					PREDICTED: Homo sapiens similar to double homeobox 4c (LOC649415), mRNA.					
Homo sapiens	RefSeq	XM_375042.3	ILMN_42792	DKFZP434B061	XM_375042.3	XM_375042.3		26080	89061678	XM_375042.3	DKFZP434B061	XP_375042.3	ILMN_1694988	0006510523	A	1876	AACAGGGTCGCCATCCACGGCTTCGCCAACAGGGTCGCCTTCCACAGCAT					PREDICTED: Homo sapiens DKFZP434B061 protein (DKFZP434B061), mRNA.					
Homo sapiens	RefSeq	XM_375042.3	ILMN_42792	DKFZP434B061	XM_375042.3	XM_375042.3		26080	89061678	XM_375042.3	DKFZP434B061	XP_375042.3	ILMN_1743195	0004890484	I	316	GGTGTGGCATCCTTGCCTGGTTTCAATGTGAAGAGCCACCCTGATCCTGG					PREDICTED: Homo sapiens DKFZP434B061 protein (DKFZP434B061), mRNA.					
Homo sapiens	RefSeq	XM_927532.1	ILMN_177657	LOC728951	XM_001128885.1	XM_001128885.1		728951	113427116	XM_001128885.1	LOC728951	XP_001128885.1	ILMN_1711628	0002650242	S	7	CCCAGACTTCATACCAGCTCCCAACACCATGACCTGCTGCCAGACCAGCT	17	+	93888-93915:93916-93937		PREDICTED: Homo sapiens similar to keratin associated protein 1-3 (LOC728951), mRNA.					
Homo sapiens	RefSeq	NM_030966.1	ILMN_177657	LOC728951	XM_001128885.1	XM_001128885.1		728951	113427116	XM_001128885.1	LOC728951	XP_001128885.1	ILMN_1776354	0001230113	S	1	AAGCAACCCAGACTTCATACCAGCTCCCAACACCATGACCTGCTGCCAGA	17	+	93882-93915:93916-93931		PREDICTED: Homo sapiens similar to keratin associated protein 1-3 (LOC728951), mRNA.					KAP1.8B; KAP1.6; KAP1.8A; KAP1.3; MGC119905; KAP1.9; MGC119903; KRTAP1.3; KAP1.2; MGC119904
Homo sapiens	RefSeq	NM_017873.2	ILMN_28184	ASB6	NM_017873.2	NM_017873.2		140459	30089933	NM_017873.2	ASB6	NP_060343.1	ILMN_1655532	0000870164	I	627	TGCAGCGCCTCCTGGACCTTGGAGCTGATGTCAATGCCGCTGACAAGCAT	9	-	132401481-132401530	9q34.11d	Homo sapiens ankyrin repeat and SOCS box-containing 6 (ASB6), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		MGC1024; FLJ20548	MGC1024; FLJ20548
Homo sapiens	Unigene	Hs.563767	ILMN_116557	HS.563767	Hs.563767		Hs.563767		11598672	BF513493			ILMN_1903552	0001980367	S	30	GGATCTCACCCTTTTGGTCTCCCCAGTAGCTAGGGCTACAAGTGCACCCC	1	+	193224234-193224283		UI-H-BW1-ams-h-05-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3071096 3, mRNA sequence					
Homo sapiens	RefSeq	XM_944009.1	ILMN_168402	LOC339209	XM_294854.4	XM_294854.4		339209	113426966	XM_294854.4	LOC339209	XP_294854.1	ILMN_1689350	0002230347	A	756	TTCCCATGAAGCTGAACCGTTACTCTCTGCCAAAACCTCCCACTCTCAAG	17	+	48419932-48419981	17q22a	PREDICTED: Homo sapiens similar to hCG2045603 (LOC339209), mRNA.					
Homo sapiens	RefSeq	NM_014011.4	ILMN_16239	SOCS5	NM_014011.4	NM_014011.4		9655	41349444	NM_014011.4	SOCS5	NP_054730.1	ILMN_2262749	0001710682	I	100	GATTGGCCGCTAGGAATCCCGCCCCTCTAAAGCCCTGCCTGCTATTGGTC	2	+	46779702-46779751	2p21a	Homo sapiens suppressor of cytokine signaling 5 (SOCS5), transcript variant 1, mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [pmid 10773671] [evidence NAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation [goid 45627] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence ISS]	Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	CIS6; SOCS-5; KIAA0671; CISH6; Cish5	CIS6; KIAA0671; CISH6; SOCS-5; Cish5
Homo sapiens	RefSeq	NM_014011.4	ILMN_16239	SOCS5	NM_014011.4	NM_014011.4		9655	41349444	NM_014011.4	SOCS5	NP_054730.1	ILMN_2350970	0006370379	A	4282	TCACCAGCATGAACTTGCACCTAAGTCTATATTCACTGTGTCCTTTTCTG	2	+	46843291-46843340	2p21a	Homo sapiens suppressor of cytokine signaling 5 (SOCS5), transcript variant 1, mRNA.		Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [pmid 10773671] [evidence NAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T-helper 1 cell differentiation [goid 45627] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell differentiation [goid 45629] [evidence ISS]	Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	CIS6; SOCS-5; KIAA0671; CISH6; Cish5	CIS6; KIAA0671; CISH6; SOCS-5; Cish5
Homo sapiens	RefSeq	NM_017429.2	ILMN_16539	BCMO1	NM_017429.2	NM_017429.2		53630	74027269	NM_017429.2	BCMO1	NP_059125.2	ILMN_1814686	0003890072	S	2348	GACCAGGAAGGTTATGCCACTTTGTGGTCATTCCATGCAAGTCATGGCGT	16	+	79882169-79882218	16q23.2b	Homo sapiens beta-carotene 15,15'-monooxygenase 1 (BCMO1), mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: beta-carotene + O2 = 2 retinal [goid 3834] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	BCMO; BCO; FLJ10730; BCDO1; BCDO	BCMO; BCO; FLJ10730; BCDO1; BCDO
Homo sapiens	RefSeq	NM_005100.2	ILMN_167379	AKAP12	NM_005100.2	NM_005100.2		9590	21493021	NM_005100.2	AKAP12	NP_005091.2	ILMN_2308950	0006940475	A	6406	CTACTCTTATATGCTGGACTGCATTCACACATGGCATGAAATAAGTCAGG	6	+	151719410-151719459	6q25.1c	Homo sapiens A kinase (PRKA) anchor protein (gravin) 12 (AKAP12), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10858453] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10858453] [evidence TAS]	Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10858453] [evidence TAS]	DKFZp686M0430; AKAP250; DKFZp686O0331	DKFZp686M0430; AKAP250; DKFZp686O0331
Homo sapiens	RefSeq	NR_003687.1	ILMN_345731	SNORD19B	NR_003687.1	NR_003687.1		100113381	154800500	NR_003687.1	SNORD19B		ILMN_3236052	0001780711	S	36	ATCTTGATTTAAGTGAATGAAAAATTACAAGATCCAACTCTGATTTCAGC	3	+	52699829-52699878	3p21.1d	Homo sapiens small nucleolar RNA, C/D box 19B (SNORD19B), small nucleolar RNA.					
Homo sapiens	RefSeq	NM_144719.2	ILMN_162486	CCDC13	NM_144719.2	NM_144719.2		152206	40255075	NM_144719.2	CCDC13	NP_653320.2	ILMN_2174875	0006450528	S	2691	GCTCCATCTGTAGCCGTCCACACCCTACACAGACTTGGGGCACTATGCTC	3	-	42724969-42725018	3p22.1a	Homo sapiens coiled-coil domain containing 13 (CCDC13), mRNA.				FLJ25467	FLJ25467
Homo sapiens	RefSeq	XM_933416.1	ILMN_16563	SPAG11B	NM_058207.2	NM_058207.2		10407	126091069	NM_058207.2	SPAG11B	NP_478114.2	ILMN_1662629	0000730128	I	15	TTCACGGGAGGGCAGGGAGGTTCAACGGACCTTAAAACATGAAGGTCTTT	8	-	7309823-7309835:7309836-7309872	8p23.1e	Homo sapiens sperm associated antigen 11B (SPAG11B), transcript variant E, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10698202] [evidence NAS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 8167223] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC61846; EP2C; EP2; HE2C; EP2D; SPAG11; SPAG11B; HE2	
Homo sapiens	RefSeq	NM_005450.2	ILMN_7080	NOG	NM_005450.2	NM_005450.2		9241	38788425	NM_005450.2	NOG	NP_005441.1	ILMN_1652287	0006770603	S	960	GGATTCCCATCCAGTACCCCATCATTTCCGAGTGCAAGTGCTCGTGCTAG	17	+	52027233-52027282	17q22c	Homo sapiens noggin (NOG), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 17029022] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10080184] [evidence TAS]	The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [pmid 10780858] [evidence ISS]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [pmid 10780858] [evidence ISS]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [pmid 7666191] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IEA]; The process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line [goid 35019] [pmid 17889703] [evidence IMP]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 10780858] [evidence ISS]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [pmid 10080184] [evidence IMP]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [pmid 10080184] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; The process by which the anatomical structures of the notochord are generated and organized. Morphogenesis pertains to the creation of form. The notochord is a mesoderm-derived structure located ventral of the developing nerve cord. In vertebrates, the notochord serves as a core around which other mesodermal cells form the vertebrae. In the most primitive chordates, which lack vertebrae, the notochord persists as a substitute for a vertebral column [goid 48570] [evidence IEA]; The process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome [goid 48646] [evidence IEA]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [pmid 10080184] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte differentiation [goid 48712] [pmid 10780858] [evidence ISS]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell proliferation [goid 60044] [pmid 10780858] [evidence ISS]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [pmid 10080184] [evidence IMP]; The process by which the anatomical structures of skeletal joints are generated and organized during the embryonic phase. A joint is the connecting structure between the bones of the skeleton. Morphogenesis pertains to the creation of form [goid 60272] [pmid 16151340] [evidence IMP]	Interacting selectively with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 19955] [pmid 8752214] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11562478] [evidence IDA]	SYNS1; SYM1	SYNS1; SYM1
Homo sapiens	RefSeq	NM_001009894.2	ILMN_26574	C12ORF29	NM_001009894.2	NM_001009894.2		91298	61742163	NM_001009894.2	C12orf29	NP_001009894.2	ILMN_1792671	0000110240	S	2571	GATCAGGGAAACCTTTGGGACTTCTGACAGGCATCTGGTGAAGAGACAAT	12	+	86967765-86967814	12q21.32a	Homo sapiens chromosome 12 open reading frame 29 (C12orf29), mRNA.				MGC102978; FLJ38158; DKFZp313K0436; DKFZp686L04169; DKFZp434N2030	MGC102978; FLJ38158; DKFZp313K0436; DKFZp686L04169; DKFZp434N2030
Homo sapiens	RefSeq	XM_927140.1	ILMN_39786	LOC643870	XM_927140.1	XM_927140.1		643870	88995869	XM_927140.1	LOC643870	XP_932233.1	ILMN_1782611	0003400762	S	8	CCCACATTTACAAAATCCGGGAGACTGCGGATGGGCTGTGCCTGGAGGTG	6	-	86194310-86194359	6q14.3c	PREDICTED: Homo sapiens similar to Translationally-controlled tumor protein (TCTP) (p23) (Histamine-releasing factor) (HRF) (Fortilin) (LOC643870), mRNA.					
Homo sapiens	RefSeq	NM_017676.2	ILMN_5484	GIN1	NM_017676.2	NM_017676.2		54826	116812605	NM_017676.2	GIN1	NP_060146.2	ILMN_3249235	0003390382	S	3465	CCTCAGAAGACCAACCCTGTCAATACCTTATCTCAGACTTTTGCCTCCAG	5	-	102449712-102449761	5q21.1d	Homo sapiens gypsy retrotransposon integrase 1 (GIN1), mRNA.		The process by which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome [goid 15074] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	GIN-1; FLJ20125; ZH2C2; TGIN1	
Homo sapiens	RefSeq	XM_945054.1	ILMN_42484	LOC648979	XM_945054.1	XM_945054.1		648979	89035987	XM_945054.1	LOC648979	XP_950147.1	ILMN_1708647	0003520474	A	19	GGCCCACCCAGTGTGGAGCTCAAAGGTGCCACTGTTCTGCTCCTCTTTAT					PREDICTED: Homo sapiens hypothetical protein LOC648978, transcript variant 2 (LOC648979), mRNA.					
Homo sapiens	RefSeq	NM_003097.3	ILMN_17485	SNURF	NM_005678.3	NM_005678.3		8926	29540557	NM_005678.3	SNURF	NP_005669.2	ILMN_1660000	0001050408	I	4	AGTGGAGCGGCCGCCGGAGATGCCTGACGCATCTGTCTGAGGAGCGGTCA	15	+	22751231-22751280	15q11.2e	Homo sapiens SNRPN upstream reading frame (SNURF), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10318933] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		SMN; SM-D; SNRNP-N; SNURF-SNRPN; HCERN3; RT-LI
Homo sapiens	RefSeq	XM_943589.1	ILMN_39571	LOC647946	XM_943589.1	XM_943589.1		647946	89047388	XM_943589.1	LOC647946	XP_948682.1	ILMN_1747678	0004540746	I	1578	AAATTAAAGCTCTAAATCTCATTTCCACTTAGATTTTAACGTTGCATTGT					PREDICTED: Homo sapiens hypothetical protein LOC647945, transcript variant 3 (LOC647946), mRNA.					
Homo sapiens	Unigene	Hs.568612	ILMN_120793	HS.568612	Hs.568612		Hs.568612		19711507	BM992118			ILMN_1891310	0004610647	S	195	GGCTGGGGACTAGAATAGCTAGGGTTTCTGTAGCACCACTCCATCCCTGA	11	-	64948620-64948669		UI-H-DF1-auf-d-07-0-UI.s1 NCI_CGAP_DF1 Homo sapiens cDNA clone IMAGE:5868630 3, mRNA sequence					
Homo sapiens	RefSeq	NM_007334.1	ILMN_15508	KLRD1	NM_007334.1	NM_007334.1		3824	7669498	NM_007334.1	KLRD1	NP_031360.1	ILMN_2386453	0007570377	A	1083	CCCAGGCTGGAGCATAGTGGCAAGATCATAGCTCATTGCAAGCTCAAGTG	12	+	10359035-10359084	12p13.2c	Homo sapiens killer cell lectin-like receptor subfamily D, member 1 (KLRD1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11513152] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7589107] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7589107] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7589107] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CD94	CD94
Homo sapiens	RefSeq	NM_007334.1	ILMN_15508	KLRD1	NM_007334.1	NM_007334.1		3824	7669498	NM_007334.1	KLRD1	NP_031360.1	ILMN_1799134	0001770598	A	524	CTCTTACAGTGAGGAGCACACCGCCTGGTTGTGGGAGAATGGCTCTGCAC	12	+	10357317-10357366	12p13.2c	Homo sapiens killer cell lectin-like receptor subfamily D, member 1 (KLRD1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11513152] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7589107] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 7589107] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7589107] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CD94	CD94
Homo sapiens	RefSeq	XM_928675.1	ILMN_170394	LOC729047	XM_001129151.1	XM_001129151.1		729047	113421550	XM_001129151.1	LOC729047	XP_001129151.1	ILMN_1807078	0005900424	I	788	AAGAGAAGGAAGTCGACTCCCAGTCGAGCCATAGTCCATTTGTCCCGGGC	10	-	52169246-52169279:52169280-52169295	10q11.23b	PREDICTED: Homo sapiens hypothetical protein LOC729047 (LOC729047), mRNA.					
Homo sapiens	RefSeq	XM_939882.1	ILMN_41250	LOC401087	XM_939882.1	XM_939882.1		401087	88971049	XM_939882.1	LOC401087	XP_944975.1	ILMN_1749177	0000730609	A	1242	GCTGGAGGCGGAGCTGCAACGCTACAGGTCAGAGGATTCCCAGCTCCCAA					PREDICTED: Homo sapiens hypothetical LOC401087 (LOC401087), mRNA.					
Homo sapiens	Unigene	Hs.558485	ILMN_113253	HS.558485	Hs.558485		Hs.558485		46959431	BX436458			ILMN_1901009	0000780131	S	338	TCAACAAAGAGGTGCTGACCTGAGAGTAGGGCACATAACCTCAGCCACTG	7	+	142205982-142206031		BX436458 Homo sapiens THYMUS Homo sapiens cDNA clone CS0CAP001YL02 5-PRIME, mRNA sequence					
Homo sapiens	RefSeq	NM_015962.4	ILMN_3510	FCF1	NM_015962.4	NM_015962.4		51077	74229022	NM_015962.4	FCF1	NP_057046.1	ILMN_2189870	0001990402	S	1910	TGAGGTCAGGAGTTGGAGATGAGCCTGGACAACATGGCAAAACCCCACCT	14	+	74272648-74272697	14q24.3a	Homo sapiens FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) (FCF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		C14orf111; MGC99629; Bka; CGI-35	C14orf111; MGC99629; Bka; CGI-35
Homo sapiens	RefSeq	NM_015962.4	ILMN_3510	FCF1	NM_015962.4	NM_015962.4		51077	74229022	NM_015962.4	FCF1	NP_057046.1	ILMN_2189869	0000060307	S	1764	TGCGTGCCACCACGTCCAGCCACTGATGCTGTTTTGCCACTGATGCTGTT	14	+	74272502-74272551	14q24.3a	Homo sapiens FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) (FCF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]		C14orf111; MGC99629; Bka; CGI-35	C14orf111; MGC99629; Bka; CGI-35
Homo sapiens	RefSeq	XM_938198.1	ILMN_136981	NSF	XM_938198.1	XM_938198.1		4905	89042742	XM_938198.1	NSF	XP_943291.1	ILMN_1752606	0000290670	I	865	AGCAAGGAAGTTGGTTGTACTGTTGGTTTGCTCTCCCTGTCCTGCTTCGC				17q21.32a	PREDICTED: Homo sapiens N-ethylmaleimide-sensitive factor (NSF), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]		
Homo sapiens	RefSeq	XM_001723016.1	ILMN_347878	LOC729978	XM_001723016.1	XM_001723016.1		729978	169209799	XM_001723016.1	LOC729978	XP_001723068.1	ILMN_3304111	0006980601	M	2418	AATCACCACCCGAACCCAAGAGGCGGAGGGCCGCTGAGGTGGAATCACCA	16	-	11928835-11928884	16p13.13b	PREDICTED: Homo sapiens similar to LOC339047 protein, transcript variant 2 (LOC729978), mRNA.					
Homo sapiens	RefSeq	NM_003679.2	ILMN_10994	KMO	NM_003679.2	NM_003679.2		8564	52851407	NM_003679.2	KMO	NP_003670.1	ILMN_1730917	0002470743	S	4721	ACCTAGATTCCTAAATGACTGCATAGGACAGATCCCATCTCCTCCACCCA	1	+	239825300-239825349	1q43e	Homo sapiens kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) (KMO), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10672018] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid [goid 19674] [pmid 14704851] [evidence EXP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: L-kynurenine + NADPH + H+ + O2 = 3-hydroxy-L-kynurenine + NADP+ + H2O [goid 4502] [pmid 10672018] [evidence EXP]; Catalysis of the reaction: L-kynurenine + NADPH + H+ + O2 = 3-hydroxy-L-kynurenine + NADP+ + H2O [goid 4502] [pmid 9237672] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9237672] [evidence TAS]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]	dJ317G22.1	dJ317G22.1
Homo sapiens	RefSeq	NM_080385.2	ILMN_13619	CPA5	NM_080385.3	NM_080385.3		93979	142370325	NM_080385.3	CPA5	NP_525124.2	ILMN_1791530	0001450056	S	2230	TTTGGCAGCATCAGCACCACCCTCTATGTGGCCAGTGGGATCACCGTCGA	7	+	129795043-129795067:129795487-129795511	7q32.2b	Homo sapiens carboxypeptidase A5 (CPA5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ35969	FLJ35969
Homo sapiens	RefSeq	NM_001815.1	ILMN_21499	CEACAM3	NM_001815.2	NM_001815.2		1084	121114299	NM_001815.2	CEACAM3	NP_001806.2	ILMN_1743570	0001850139	S	988	GATGAATATCTGGAGACCTCGACAGCCTGCCCTAGGCCCTGGGTGGGTCA	19	+	42315428-42315477	19q13.2c	Homo sapiens carcinoembryonic antigen-related cell adhesion molecule 3 (CEACAM3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			W282; W264; MGC119875; CGM1; CEA; CD66D	CGM1; CEA; CD66D
Homo sapiens	RefSeq	NM_138818.2	ILMN_19570	PRUNE2	NM_138818.2	NM_138818.2		158471	34147618	NM_138818.2	PRUNE2	NP_620173.1	ILMN_1700771	0007570576	S	737	AGAGAGGACATCATCAACGTCCTACAGGAGACCCAGTTCAGTGCTCAGGG	9	-	78628461-78628462:78631316-78631363	9q21.13c	Homo sapiens prune homolog 2 (Drosophila) (PRUNE2), transcript variant 2, mRNA.			Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	C9orf65; BNIPXL; RP11-58J3.2; KIAA0367; DKFZp762K117; BMCC1; bA214N16.3; A214N16.3	C9orf65; BNIPXL; RP11-58J3.2; KIAA0367; DKFZp762K117; BMCC1; bA214N16.3; A214N16.3
Homo sapiens	RefSeq	NM_138818.2	ILMN_19570	PRUNE2	NM_138818.2	NM_138818.2		158471	34147618	NM_138818.2	PRUNE2	NP_620173.1	ILMN_2075526	0005420767	S	847	AGTGGCCATTAGTACTGTGAGCATGAACCTTGAGGTAAGGGTGGGAATGC	9	-	78628351-78628400	9q21.13c	Homo sapiens prune homolog 2 (Drosophila) (PRUNE2), transcript variant 2, mRNA.			Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	C9orf65; BNIPXL; RP11-58J3.2; KIAA0367; DKFZp762K117; BMCC1; bA214N16.3; A214N16.3	C9orf65; BNIPXL; RP11-58J3.2; KIAA0367; DKFZp762K117; BMCC1; bA214N16.3; A214N16.3
Homo sapiens	RefSeq	NR_002717.1	ILMN_4624	ATXN8OS	NR_002717.1	NR_002717.1		6315	84872001	NR_002717.1	ATXN8OS		ILMN_2111556	0003390615	S	269	GGAAGGCTTCTTCCAGAAAGTGCTCACACCGCTTCTCTCTTGGCTTTTGA	13	+	69579614-69579663	13q21.33b	Homo sapiens ataxin 8 opposite strand (ATXN8OS) on chromosome 13.				KLHL1AS; SCA8	KLHL1AS; SCA8
Homo sapiens	RefSeq	NM_001369.1	ILMN_164381	DNAH5	NM_001369.1	NM_001369.1		1767	19115953	NM_001369.1	DNAH5	NP_001360.1	ILMN_1689829	0002350554	S	13866	CCCTGAACACTGGGTGCTCCGTGGGGTTGCCCTTCTGTGTGATGTCAAGT	5	-	13745094-13745143	5p15.2a	Homo sapiens dynein, axonemal, heavy chain 5 (DNAH5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which in converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains [goid 5858] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Cell motility due to movement of cilia or flagella [goid 1539] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 8812413] [evidence NAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	HL1; DNAHC5; FLJ46759; KIAA1603; CILD3; PCD; KTGNR	HL1; DNAHC5; KIAA1603; CILD3; PCD
Homo sapiens	RefSeq	XM_935714.1	ILMN_39481	LOC641950	XM_935714.1	XM_935714.1		641950	89027694	XM_935714.1	LOC641950	XP_940807.1	ILMN_1654672	0002230131	S	210	GAATTATGTGCGTATGGAGCACACGGAGCACTCTAAGTGGCTTCCTGAAA					PREDICTED: Homo sapiens similar to 60S ribosomal protein L21 (LOC641950), mRNA.					
Homo sapiens	RefSeq	NM_001024465.1	ILMN_19760	SOD2	NM_001024465.1	NM_001024465.1		6648	67782306	NM_001024465.1	SOD2	NP_001019636.1	ILMN_2336781	0003890326	A	677	GGCCTTATTCCACTGCTGGGGATTGATGTGTGGGAGCACGCTTACTACCT	6	-	160103621-160103670	6q25.3f	Homo sapiens superoxide dismutase 2, mitochondrial (SOD2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 15087454] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [pmid 9462746] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1315] [pmid 14980699] [evidence IMP]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9393747] [evidence IMP]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [pmid 14980699] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 9462746] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion [goid 303] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species, where the change varies according to the age of the cell or organism [goid 1315] [evidence ISS]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus [goid 42542] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [pmid 14980699] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: 2 peroxide radical + 2 H+ = O2 + H2O2 [goid 4784] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MNSOD; IPO-B; Mn-SOD	MNSOD; IPO-B; Mn-SOD
Homo sapiens	RefSeq	XM_936262.1	ILMN_41127	LOC642118	XM_936262.1	XM_936262.1		642118	88987379	XM_936262.1	LOC642118	XP_941355.1	ILMN_1736817	0003360577	S	17	GGTCGTTGCCTCCACCTGAGAAGGGTCTGGCTTCGATCCGATTCGAGTTG					PREDICTED: Homo sapiens similar to TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor (LOC642118), mRNA.					
Homo sapiens	RefSeq	XM_001715215.1	ILMN_338962	LOC730517	XM_001715215.1	XM_001715215.1		730517	169204689	XM_001715215.1	LOC730517	XP_001715267.1	ILMN_3299702	0005420291	M	1534	GTGCCCTTCTCCACCCACATGCAAAACCGGCGAGAAGCTTGTGAAGTTCC				12q12c	PREDICTED: Homo sapiens similar to MUC19 (LOC730517), mRNA.					
Homo sapiens	RefSeq	XM_001720379.1	ILMN_349308	LOC100130562	XM_001720379.1	XM_001720379.1		100130562	169204983	XM_001720379.1	LOC100130562	XP_001720431.1	ILMN_3269537	0007150296	M	7	TCTTTTCCGAGAAAACAACAAATGGCGGATGACGCCGGTGCAGCGGGGGG				12q24.23a	PREDICTED: Homo sapiens hypothetical protein LOC100130562, transcript variant 1 (LOC100130562), mRNA.					
Homo sapiens	RefSeq	NM_016256.2	ILMN_26466	NAGPA	NM_016256.2	NM_016256.2		51172	66346699	NM_016256.2	NAGPA	NP_057340.2	ILMN_1675266	0006400630	S	1961	TGGGTTAAAGGGACGAGTCTGCCTTCCTGGCTGTGACACGGGACCCCTTT	16	-	5075037-5075086	16p13.3b	Homo sapiens N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (NAGPA), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10551838] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 10551838] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10551838] [evidence TAS]; The process of directing proteins towards the lysosome using signals contained within the protein [goid 6622] [pmid 10551838] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [pmid 10551838] [evidence TAS]	Catalysis of the reaction: glycoprotein N-acetyl-D-glucosaminyl-phospho-D-mannose + H2O = N-acetyl-D-glucosamine + glycoprotein phospho-D-mannose [goid 3944] [pmid 10551838] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	UCE; APAA	UCE; APAA
Homo sapiens	RefSeq	NM_017971.2	ILMN_859	MRPL20	NM_017971.2	NM_017971.2		55052	26638656	NM_017971.2	MRPL20	NP_060441.2	ILMN_2189424	0000520521	S	3	CAAGATGGCAGCGGCGCTGCGCGTGCGTTGTTGAGTGTTCGGGACGCCGG	1	-	1332472-1332521	1p36.33a	Homo sapiens mitochondrial ribosomal protein L20 (MRPL20), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC4779; L20mt; MGC74465	MGC4779; L20mt; MGC74465
Homo sapiens	RefSeq	NM_017971.2	ILMN_859	MRPL20	NM_017971.2	NM_017971.2		55052	26638656	NM_017971.2	MRPL20	NP_060441.2	ILMN_1693352	0002060646	S	51	GGCCTGCAGGCGCCATGGTCTTCCTCACCGCGCAGCTCTGGCTGCGGAAT	1	-	1332424-1332460:1332461-1332473	1p36.33a	Homo sapiens mitochondrial ribosomal protein L20 (MRPL20), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC4779; L20mt; MGC74465	MGC4779; L20mt; MGC74465
Homo sapiens	Unigene	Hs.120893	ILMN_75680	HS.120893	Hs.120893		Hs.120893		3330465	AI056599			ILMN_1832086	0006250048	S	246	TCCTGGAGGGGGCAGGAAGCTGTGTGCTCAAGTGACATCCTTTCTTTAGT	1	-	65166768-65166817		oz10f04.x1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:1674943 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001713724.1	ILMN_334037	LOC100133607	XM_001713724.1	XM_001713724.1		100133607	169172642	XM_001713724.1	LOC100133607	XP_001713776.1	ILMN_3274470	0005090341	M	3759	AATACTATTCTTTGGCTGGGTGTGGTGGCTCACGCCTGTAATCCCAGCAC					PREDICTED: Homo sapiens hypothetical protein LOC100133607, transcript variant 2 (LOC100133607), mRNA.					
Homo sapiens	RefSeq	NM_182586.1	ILMN_8578	FLJ33534	NM_182586.1	NM_182586.1		285150	32699002	NM_182586.1	FLJ33534	NP_872392.1	ILMN_1755635	0001230110	S	1710	CTGAGGACCATCATCTGTTGAGCACCTACTGCCACCGTGTGCTCTGCATG	2	-	11156885-11156934	2p25.1b	Homo sapiens hypothetical protein FLJ33534 (FLJ33534), mRNA.					
Homo sapiens	RefSeq	NM_152733.1	ILMN_307890	BTBD9	NM_052893.1	NM_052893.1		114781	151108410	NM_052893.1	BTBD9	NP_443125.1	ILMN_1732271	0005560273	S	2261	GCCAGAAGGAGGAAAATAGTGAGGAATCGGGGACAGGGGACACCAGCCTG	6	-	38565866-38565870:38565871-38565897:38580610-38580627	6p21.2b	Homo sapiens BTB (POZ) domain containing 9 (BTBD9), transcript variant 1, mRNA.		The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC120519; dJ322I12.1; MGC120520; MGC120517; KIAA1880; FLJ32945	MGC120519; dJ322I12.1; MGC120520; MGC120517; KIAA1880; FLJ32945
Homo sapiens	RefSeq	NM_001699.3	ILMN_28087	AXL	NM_021913.2	NM_021913.2		558	21536465	NM_021913.2	AXL	NP_068713.2	ILMN_1701877	0004640403	A	4879	GGGATGGACGATCTCCCACCTTTCGGGCCATGTTGCCCCCGTGAGCCAAT	19	+	46459368-46459417	19q13.2c	Homo sapiens AXL receptor tyrosine kinase (AXL), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1656220] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1656220] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 1656220] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	UFO	UFO
Homo sapiens	RefSeq	XM_001725738.1	ILMN_337702	LOC100132413	XM_001725738.1	XM_001725738.1		100132413	169163255	XM_001725738.1	LOC100132413	XP_001725790.1	ILMN_3202448	0000780564	A	962	TTGTCAAGTCTAGGGAAGAGCCAGCTGTGTCCAAACTCAGGACCGTGGGT	2	+	69009484-69009491:69012908-69012949	2p14a	PREDICTED: Homo sapiens similar to hCG1782458 (LOC100132413), mRNA.					
Homo sapiens	Unigene	Hs.253267	ILMN_83465	HS.253267	Hs.253267		Hs.253267		13966677	BG698913			ILMN_1865604	0002650048	S	462	GCTAGGAGCTGGGGAGAGGGAAGAATAGTGAGTGCATGCTAATGAGTCTG	5	+	121395553-121395562:121395564-121395603		602703330F1 NCI_CGAP_Skn3 Homo sapiens cDNA clone IMAGE:4800534 5, mRNA sequence					
Homo sapiens	RefSeq	XR_017231.2	ILMN_170803	KRT8P9	XR_017231.2	XR_017231.2		390601	169208102	XR_017231.2	KRT8P9		ILMN_3191922	0001410097	A	1207	TGTCAAGCTGGCCTTGGGCATCAAAACTGCCACCTACAGGAAGCTGCTGG	15	+	68939242-68939291	15q23b	PREDICTED: Homo sapiens misc_RNA (KRT8P9), miscRNA.					
Homo sapiens	RefSeq	NM_198147.1	ILMN_19110	ABHD15	NM_198147.1	NM_198147.1		116236	39930568	NM_198147.1	ABHD15	NP_937790.1	ILMN_1769390	0005340450	S	2451	GGGACCAGAGGAAACAAAAGCACCAAGAGGTTGACTAGAGCTGACCAGTG	17	-	27888549-27888598	17q11.2b	Homo sapiens abhydrolase domain containing 15 (ABHD15), mRNA.					
Homo sapiens	RefSeq	NM_004879.3	ILMN_25825	EI24	NM_001007277.1	NM_001007277.1		9538	55956767	NM_001007277.1	EI24	NP_001007278.1	ILMN_1669394	0000770541	A	1900	CACTAAACCTGAACTTTTCAACTCCGTTGGTGGTGGGAGGCAGCGGGCAG	11	+	124959536-124959585	11q24.2b	Homo sapiens etoposide induced 2.4 mRNA (EI24), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9305847] [evidence TAS]		TP53I8; PIG8	TP53I8; PIG8
Homo sapiens	RefSeq	XM_001722543.1	ILMN_342972	LOC100131433	XM_001722543.1	XM_001722543.1		100131433	169179691	XM_001722543.1	LOC100131433	XP_001722595.1	ILMN_3285159	0001110441	M	3	GGCACACAAACTAGACCTGGAAGAAATTGCCAGCTTGGATAAGGCCAAGC				9p22.3b	PREDICTED: Homo sapiens similar to thymosin, beta 10 (LOC100131433), mRNA.					
Homo sapiens	RefSeq	NM_025215.4	ILMN_13055	PUS1	NM_001002019.1	NM_001002019.1		80324	70166598	NM_001002019.1	PUS1	NP_001002019.1	ILMN_1662658	0000060092	A	1489	CCGGCGTTGTAACCTCAGGACCTTCCCTTGTAGGAACAGCCTTTCTCGAA	12	+	130994202-130994251	12q24.33c	Homo sapiens pseudouridylate synthase 1 (PUS1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence NAS]	Catalysis of the reaction: uracil + D-ribose 5-phosphate = pseudouridine 5'-phosphate + H2O [goid 4730] [pmid 10094309] [evidence NAS]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MLASA; MGC11268	MLASA; MGC11268
Homo sapiens	RefSeq	NM_001002019.1	ILMN_13055	PUS1	NM_001002019.1	NM_001002019.1		80324	70166598	NM_001002019.1	PUS1	NP_001002019.1	ILMN_2411559	0006100735	A	1111	AAGTACAACCAGCGCTTTGGCAACGATGGGCTGCATGAGCCGCTGGACTG	12	+	130992269-130992318	12q24.33c	Homo sapiens pseudouridylate synthase 1 (PUS1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence NAS]	Catalysis of the reaction: uracil + D-ribose 5-phosphate = pseudouridine 5'-phosphate + H2O [goid 4730] [pmid 10094309] [evidence NAS]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MLASA; MGC11268	MLASA; MGC11268
Homo sapiens	RefSeq	NM_030624.1	ILMN_4687	KLHL15	NM_030624.1	NM_030624.1		80311	62988271	NM_030624.1	KLHL15	NP_085127.1	ILMN_1701648	0002190750	S	1958	AACAAGTGGAAGGAAGATGAGTACCCTCGGATGCCCTGCAAGCTGGATGG	X	-	23916022-23916071	Xp22.11a	Homo sapiens kelch-like 15 (Drosophila) (KLHL15), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC126149; MGC126148	MGC126149; MGC126148
Homo sapiens	RefSeq	NR_031567.1	ILMN_388497	MIR1468	NR_031567.1	NR_031567.1		100302115	269846922	NR_031567.1	MIR1468		ILMN_3309274	0000290255	S	7	GGTTTCTCCGTTTGCCTGTTTCGCTGATGTGCATTCAACTCATTCTCAGC					Homo sapiens microRNA 1468 (MIR1468), microRNA.					
Homo sapiens	RefSeq	NM_006468.5	ILMN_9817	POLR3C	NM_006468.6	NM_006468.6		10623	141801742	NM_006468.6	POLR3C	NP_006459.3	ILMN_1795678	0006130138	S	1703	CCAGGTGGACGAAACCATCTTCCTGCTGGAGTCTTACATTGAGTGCACCA	1	-	145592703-145592752	1q21.1b	Homo sapiens polymerase (RNA) III (DNA directed) polypeptide C (62kD) (POLR3C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5666] [pmid 9171375] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA ploymerase III promoter [goid 6359] [pmid 9171375] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [pmid 9171375] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	RPC62; RPC3	RPC62; RPC3
Homo sapiens	RefSeq	NM_080599.1	ILMN_21510	UPF2	NM_080599.1	NM_080599.1		26019	18375675	NM_080599.1	UPF2	NP_542166.1	ILMN_1679417	0002810592	I	5	GCCGCAGGGAAGACGATCAGGACTGTTTTTAATCGGGCAGTCGCGCGGAT	10	-	12124975-12125024	10p14a	Homo sapiens UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14636577] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14636577] [evidence IDA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 16488880] [evidence TAS]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 16488880] [evidence TAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15231747] [evidence IPI]	smg-3; KIAA1408; MGC138835; HUPF2; DKFZP434D222; RENT2; MGC138834	smg-3; KIAA1408; MGC138835; HUPF2; DKFZP434D222; RENT2; MGC138834
Homo sapiens	RefSeq	NM_080599.1	ILMN_21510	UPF2	NM_080599.1	NM_080599.1		26019	18375675	NM_080599.1	UPF2	NP_542166.1	ILMN_2383693	0002750189	A	5156	TGCTGCCCAATCTTCACCAGCTTCAGAAATCTGACCTTTGCCGATGCTGC	10	-	12030444-12030493	10p14a	Homo sapiens UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14636577] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14636577] [evidence IDA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 16488880] [evidence TAS]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 16488880] [evidence TAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15231747] [evidence IPI]	smg-3; KIAA1408; MGC138835; HUPF2; DKFZP434D222; RENT2; MGC138834	smg-3; KIAA1408; MGC138835; HUPF2; DKFZP434D222; RENT2; MGC138834
Homo sapiens	RefSeq	NM_080599.1	ILMN_21510	UPF2	NM_080599.1	NM_080599.1		26019	18375675	NM_080599.1	UPF2	NP_542166.1	ILMN_1796305	0005560347	A	4668	TGGCTTAGAAAAGTGATACCAGCCCAAGAACAGGGATCTAGGTGAGCCCA	10	-	12037471-12037512:12038325-12038332	10p14a	Homo sapiens UPF2 regulator of nonsense transcripts homolog (yeast) (UPF2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14636577] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14636577] [evidence IDA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 16488880] [evidence TAS]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 16488880] [evidence TAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15231747] [evidence IPI]	smg-3; KIAA1408; MGC138835; HUPF2; DKFZP434D222; RENT2; MGC138834	smg-3; KIAA1408; MGC138835; HUPF2; DKFZP434D222; RENT2; MGC138834
Homo sapiens	RefSeq	NM_014506.1	ILMN_7916	TOR1B	NM_014506.1	NM_014506.1		27348	14149652	NM_014506.1	TOR1B	NP_055321.1	ILMN_1724333	0006180056	S	2390	AGGTCCTAGGTGTGACCTGATACCACCACCCTTTGTGGCAGCACCGGGCT	9	+	131613002-131613051	9q34.11d	Homo sapiens torsin family 1, member B (torsin B) (TOR1B), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 10644435] [evidence TAS]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9288096] [evidence TAS]	DQ1; MGC4386	DQ1; MGC4386
Homo sapiens	RefSeq	NM_001004724.1	ILMN_163504	OR4N5	NM_001004724.1	NM_001004724.1		390437	52317093	NM_001004724.1	OR4N5	NP_001004724.1	ILMN_1738700	0001710309	S	474	ACAAGTAGCCCTTATCCTGCACTTGCCTTTCTGTGGCCCAAACCAGCTCG	14	+	19682208-19682257	14q11.2a	Homo sapiens olfactory receptor, family 4, subfamily N, member 5 (OR4N5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_153251.2	ILMN_15011	ZDHHC20	NM_153251.2	NM_153251.2		253832	49457850	NM_153251.2	ZDHHC20	NP_694983.2	ILMN_1654141	0001780050	S	1274	CGGAAAGCCTTTGTACAGTTCCTGGGATTCACAGAAGCACTACTCCAGAG	13	-	21950641-21950690	13q12.11b	Homo sapiens zinc finger, DHHC-type containing 20 (ZDHHC20), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126005; FLJ25952	MGC126005; FLJ25952
Homo sapiens	RefSeq	XM_001717826.1	ILMN_336683	LOC100131542	XM_001717826.1	XM_001717826.1		100131542	169165886	XM_001717826.1	LOC100131542	XP_001717878.1	ILMN_3201183	0003850195	A	132	CCGCAGCACCCTGACTGCAGGTGCCAAGTCACAACTGCAAAGAAACTTCC				3p24.2a	PREDICTED: Homo sapiens hypothetical LOC100131542 (LOC100131542), mRNA.					
Homo sapiens	RefSeq	NM_203371.1	ILMN_173664	FIBIN	NM_203371.1	NM_203371.1		387758	42766421	NM_203371.1	FIBIN	NP_976249.1	ILMN_1716247	0004730133	S	2678	GAGGCTGGGAAAGGCTAAATGACTTATCCTCCATCAGTTATAACAGCCCC	11	+	26974881-26974930	11p14.2a	Homo sapiens fin bud initiation factor homolog (zebrafish) (FIBIN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]			MGC24932	MGC24932
Homo sapiens	RefSeq	NM_152407.2	ILMN_33289	GRPEL2	NM_152407.3	NM_152407.3		134266	87196332	NM_152407.3	GRPEL2	NP_689620.2	ILMN_1721138	0005080487	S	3819	GGCTCACTCTCACTTGAAGAGGGGATCTTGGTGTTGTAGTACTTGGACTG	5	+	148714053-148714102	5q33.1b	Homo sapiens GrpE-like 2, mitochondrial (E. coli) (GRPEL2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins [goid 774] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]	FLJ23713; FLJ33918; Mt-GrpE#2; DKFZp451C205	FLJ23713; FLJ33918; Mt-GrpE#2; DKFZp451C205
Homo sapiens	RefSeq	NM_199286.2	ILMN_1528	DPPA3	NM_199286.2	NM_199286.2		359787	52426759	NM_199286.2	DPPA3	NP_954980.1	ILMN_1781563	0005390270	S	505	CCTTCTGAGAATGCTAGAATAGGGAATCAAGACACCAAGCCACTTCAGCC	12	+	7760887-7760936	12p13.31c	Homo sapiens developmental pluripotency associated 3 (DPPA3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			STELLA	STELLA
Homo sapiens	RefSeq	NM_199286.2	ILMN_1528	DPPA3	NM_199286.2	NM_199286.2		359787	52426759	NM_199286.2	DPPA3	NP_954980.1	ILMN_2117538	0004860446	S	217	AACGCTAGTAGCGAATCTGTTTCCCCTCTATCGGAAGCTTTACTCCGTCG	12	+	7759102-7759151	12p13.31c	Homo sapiens developmental pluripotency associated 3 (DPPA3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			STELLA	STELLA
Homo sapiens	RefSeq	NM_199286.2	ILMN_1528	DPPA3	NM_199286.2	NM_199286.2		359787	52426759	NM_199286.2	DPPA3	NP_954980.1	ILMN_3251278	0000450736	S	242	CTCTATCGGAAGCTTTACTCCGTCGAGAGTCTGTAGGAGCAGCAGTCCTC	12	+	7759127-7759176	12p13.31c	Homo sapiens developmental pluripotency associated 3 (DPPA3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			STELLA	STELLA
Homo sapiens	Unigene	Hs.151207	ILMN_79027	HS.151207	Hs.151207		Hs.151207		27842116	BX094762			ILMN_1897867	0005080209	S	273	CTCACGCCTCTTGCTTTTCTCCCAGATGCTCCAAAGATAAAGGCCATGAC	8	-	118511448-118511497		BX094762 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998B084412, mRNA sequence					
Homo sapiens	RefSeq	XM_001721030.1	ILMN_347961	LOC100128805	XM_001721030.1	XM_001721030.1		100128805	169210697	XM_001721030.1	LOC100128805	XP_001721082.1	ILMN_3268028	0002070193	M	294	GGCCAGTTTCAGTGAGCCTTTGGACTGGAGGGACTGTCCCTGGATCTGCA				16p11.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128805 (LOC100128805), mRNA.					
Homo sapiens	RefSeq	XM_001715697.1	ILMN_337820	LOC342531	XM_001715697.1	XM_001715697.1		342531	169210866	XM_001715697.1	LOC342531	XP_001715749.1	ILMN_3202594	0005690746	A	552	AAGACAAGAGTGTTGACTTTAAGGTTTCGCTGGCCAAAGGAGCGCGTGCG	17	+	6501988-6502027:6502797-6502806	17p13.2a	PREDICTED: Homo sapiens similar to Arachidonate 15-lipoxygenase (Arachidonate omega-6 lipoxygenase) (15-LOX) (LOC342531), mRNA.					
Homo sapiens	RefSeq	NM_007261.2	ILMN_20704	CD300A	NM_007261.2	NM_007261.2		11314	56550060	NM_007261.2	CD300A	NP_009192.2	ILMN_1693552	0004780196	S	1555	AGGTGGCACCTGCCAATAGCTTTGTCAATCACAGCCCCATAGGAACGTCT	17	+	69992194-69992243	17q25.1b	Homo sapiens CD300a molecule (CD300A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CMRF35H; IRp60; IRC1; CMRF-35-H9; CMRF-35H; IGSF12; CMRF35H9; IRC2	CMRF35H; IRp60; IRC1; CMRF-35-H9; CMRF-35H; IGSF12; CMRF35H9; IRC2
Homo sapiens	RefSeq	NM_033129.1	ILMN_5235	SCRT2	NM_033129.2	NM_033129.2		85508	145386583	NM_033129.2	SCRT2	NP_149120.1	ILMN_1706682	0004260196	S	3487	TATCCCAACTCACCCCCAAACCCCCATCCCTTCCCCACCTCCAGCAGTAT	20	-	590280-590329	20p13f	Homo sapiens scratch homolog 2, zinc finger protein (Drosophila) (SCRT2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_002572.1	ILMN_25341	PAFAH1B2	NM_002572.2	NM_002572.2		5049	142345697	NM_002572.2	PAFAH1B2	NP_002563.1	ILMN_1743319	0001030196	S	750	GTTGGAGGAAACACCTGAGGAGAAACAAACCACCATTGCCTGACTGGCTC	11	+	116543583-116543625:116543626-116543632	11q23.3b	Homo sapiens platelet-activating factor acetylhydrolase, isoform Ib, subunit 2 (30kDa) (PAFAH1B2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]		
Homo sapiens	Unigene	Hs.396491	ILMN_89446	HS.396491	Hs.396491		Hs.396491		23546341	BU689002			ILMN_1833004	0002360703	S	451	CCTGGGACGATACCTTGCACACAGCTGGCACTCAATAAGCACACTGCCTG	10	+	105621630-105621679		UI-CF-EC1-ady-b-08-0-UI.s1 UI-CF-EC1 Homo sapiens cDNA clone UI-CF-EC1-ady-b-08-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038105.1	ILMN_337203	LOC729231	XR_038105.1	XR_038105.1		729231	169167091	XR_038105.1	LOC729231		ILMN_3298716	0007210133	M	1452	ACCCTACCCCCGTGACAGAAGGTGCCACTTTACCCACCTAGAACACCAAC				4q28.2a	PREDICTED: Homo sapiens misc_RNA (LOC729231), miscRNA.					
Homo sapiens	RefSeq	XR_016020.1	ILMN_178942	LOC729835	XR_016020.1	XR_016020.1		729835	113426748	XR_016020.1	LOC729835		ILMN_3305417	0001690372	M	1	ATGTCGAAGGTTTCCTTTAAGATCATGCTGACATCGGACACGCAGCTGCC	17	-	30728760-30728809	17q12a	PREDICTED: Homo sapiens misc_RNA (LOC729835), miscRNA.					
Homo sapiens	RefSeq	NM_004599.2	ILMN_16662	SREBF2	NM_004599.2	NM_004599.2		6721	27477112	NM_004599.2	SREBF2	NP_004590.2	ILMN_2217661	0006550138	S	4150	GCTCATTGTTTTTCCCTTTATTACACAGGACAGCCAGGGGAGGAGGGGGG	22	+	40632165-40632214	22q13.2b	Homo sapiens sterol regulatory element binding transcription factor 2 (SREBF2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 7903453] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7903453] [evidence TAS]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7903453] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15527767] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10976766] [evidence IPI]	SREBP2	SREBP2
Homo sapiens	RefSeq	NM_003294.3	ILMN_28888	TPSAB1	NM_003294.3	NM_003294.3		7177	61744442	NM_003294.3	TPSAB1	NP_003285.2	ILMN_1676256	0005810386	S	801	AGCCCAACCGGCCTGGCATCTACACCCGTGTCACCTACTACTTGGACTGG	16	+	1232163-1232212	16p13.3e	Homo sapiens tryptase alpha/beta 1 (TPSAB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 2677049] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2187193] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TPS2; TPSB1; alpha II; TPS1	TPSB1; TPS1; TPS2; alpha II
Homo sapiens	RefSeq	NM_003294.3	ILMN_28888	TPSAB1	NM_003294.3	NM_003294.3		7177	61744442	NM_003294.3	TPSAB1	NP_003285.2	ILMN_2169801	0006450551	S	905	GTCACTGGAGGACCAACCCCTGCTGTCCAAAACACCACTGCTTCCTACCC	16	+	1232267-1232316	16p13.3e	Homo sapiens tryptase alpha/beta 1 (TPSAB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 2677049] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2187193] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TPS2; TPSB1; alpha II; TPS1	TPSB1; TPS1; TPS2; alpha II
Homo sapiens	RefSeq	XR_037166.1	ILMN_346001	LOC727821	XR_037166.1	XR_037166.1		727821	169166648	XR_037166.1	LOC727821		ILMN_3211887	0004260397	A	189	GAAAAGGAATGCCCCGCAAGTGTTACCATGGCAAAACTGGAGGAGTCTAC				4p14d	PREDICTED: Homo sapiens misc_RNA (LOC727821), miscRNA.					
Homo sapiens	RefSeq	NM_016447.2	ILMN_163134	MPP6	NM_016447.2	NM_016447.2		51678	21361597	NM_016447.2	MPP6	NP_057531.2	ILMN_1679995	0003370280	S	1708	CTGTGGTGGATGCAGGAATCACTACCAAGCTTCTGACCGACTCTGACTTG	7	+	24674683-24674732	7p15.3a	Homo sapiens membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) (MPP6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 11311936] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11311936] [evidence IPI]	p55T; VAM-1; VAM1; PALS2	p55T; PALS2; VAM-1; VAM1
Homo sapiens	RefSeq	NM_020879.1	ILMN_12288	CCDC146	NM_020879.2	NM_020879.2		57639	100814338	NM_020879.2	CCDC146	NP_065930.2	ILMN_1790555	0004860133	S	2841	CTGCAGAGCAGCGTCCGAATGCCTACATCCCAGAAGCAGATGCCACTCTT	7	+	76760387-76760436	7q11.23f-q11.23g	Homo sapiens coiled-coil domain containing 146 (CCDC146), mRNA.				KIAA1505	
Homo sapiens	RefSeq	NM_206876.1	ILMN_22939	PPP1CB	NM_206876.1	NM_206876.1		5500	46249375	NM_206876.1	PPP1CB	NP_996759.1	ILMN_2405023	0005720017	A	3119	GTCATAGTGAAGCAGGTCTAGAAAATAAGCCTTTGGCAGGGAAAAAGGGC	2	+	28877648-28877697	2p23.2a	Homo sapiens protein phosphatase 1, catalytic subunit, beta isoform (PPP1CB), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15164081] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17511879] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PP-1B; PPP1CD; MGC3672	PP-1B; PPP1CD; MGC3672
Homo sapiens	RefSeq	NM_206876.1	ILMN_22939	PPP1CB	NM_206876.1	NM_206876.1		5500	46249375	NM_206876.1	PPP1CB	NP_996759.1	ILMN_2405018	0006200369	A	4276	GCTGCCCCTGAGAAGAGACTTAATCCAAGCCTGATTGTACTAGTGGCATC	2	+	28878805-28878854	2p23.2a	Homo sapiens protein phosphatase 1, catalytic subunit, beta isoform (PPP1CB), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15164081] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17511879] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PP-1B; PPP1CD; MGC3672	PP-1B; PPP1CD; MGC3672
Homo sapiens	RefSeq	XM_930980.1	ILMN_31818	LOC642650	XM_930980.1	XM_930980.1		642650	89034206	XM_930980.1	LOC642650	XP_936073.1	ILMN_1681730	0005340040	S	181	ACAGCAAATATTTGAAAGAGCTTAAGACGTACTCCTCAAGGGGTTTCTCC	11	+	89919672-89919711:89975621-89975630		PREDICTED: Homo sapiens hypothetical protein LOC642650 (LOC642650), mRNA.					
Homo sapiens	RefSeq	NR_031622.1	ILMN_388548	MIR1290	NR_031622.1	NR_031622.1		100302276	269847152	NR_031622.1	MIR1290		ILMN_3310960	0003360097	S	1	AGCGTCACGTTGACACTCAAAAAGTTTCAGATTTTGGAACATTTCGGATT					Homo sapiens microRNA 1290 (MIR1290), microRNA.					
Homo sapiens	RefSeq	NM_002120.2	ILMN_7656	HLA-DOB	NM_002120.3	NM_002120.3		3112	118402587	NM_002120.3	HLA-DOB	NP_002111.1	ILMN_1700428	0003450338	S	1023	CTCTCTTCCCTGATCCTTGGAGGAGCCCGAACTGATTCTGGAGCTCTGTG	6	-	32888817-32888866	6p21.32a	Homo sapiens major histocompatibility complex, class II, DO beta (HLA-DOB), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 8890155] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 2998758] [evidence TAS]	DOB	DOB
Homo sapiens	RefSeq	XM_942296.1	ILMN_34430	LOC201229	XM_942296.1	XM_942296.1		201229	89042546	XM_942296.1	LOC201229	XP_947389.1	ILMN_1667298	0006400577	A	1522	CTCAGGGAGAACGGCCAGAGTGGCCAGAAGATGCAGAGAGAAGCCCCACT				17q11.2a	PREDICTED: Homo sapiens hypothetical protein LOC201229, transcript variant 3 (LOC201229), mRNA.					
Homo sapiens	RefSeq	Hs.27621	ILMN_183828	SEMA5A	NM_003966.2	NM_003966.2		9037	147904699	NM_003966.2	SEMA5A	NP_003957.2	ILMN_1880012	0004210215	S	11397	CACCTAACCAATCAATGGAAGGCAACTCACACCTGCTCCAAGCCTCAGCT	5	-	9091284-9091333	5p15.2d	Homo sapiens sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A (SEMA5A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9049630] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9464278] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9464278] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 8046] [evidence IEA]	semF; FLJ12815; SEMAF	
Homo sapiens	RefSeq	NM_198696.2	ILMN_180491	KRTAP10-3	NM_198696.2	NM_198696.2		386682	63053514	NM_198696.2	KRTAP10-3	NP_941969.2	ILMN_2206732	0005670022	S	246	CCAGTCAGGCTGCACCAGCTCCTGCACGCCCTCGTGCTGCCAGCAGTCTA	21	-	45978348-45978397	21q22.3d	Homo sapiens keratin associated protein 10-3 (KRTAP10-3), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KAP10.3; KAP18.3; KRTAP18.3; KRTAP18-3; KAP18-3; KRTAP10.3	KAP10.3; KAP18.3; KRTAP18.3; KRTAP18-3; KAP18-3; KRTAP10.3
Homo sapiens	RefSeq	NR_015434.1	ILMN_371241	LOC148413	NR_015434.1	NR_015434.1		148413	211971044	NR_015434.1	LOC148413		ILMN_3244323	0002060541	S	1547	AGCCTTGGAAGCAGGGTGTGCTCCTCGGTGTGGTCGCTCGATACCAGAAA	1	+	1337225-1337274	1p36.33a	Homo sapiens hypothetical LOC148413 (LOC148413), non-coding RNA.					
Homo sapiens	RefSeq	NM_022771.3	ILMN_20610	TBC1D15	NM_022771.3	NM_022771.3		64786	37059748	NM_022771.3	TBC1D15	NP_073608.2	ILMN_1803941	0000240019	S	2017	CACTCTCTGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTG	12	+	70603169-70603218	12q21.1a	Homo sapiens TBC1 domain family, member 15 (TBC1D15), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	DKFZp761D0223; DKFZp686M1379; FLJ12085	DKFZp761D0223; DKFZp686M1379; FLJ12085
Homo sapiens	RefSeq	XM_941768.1	ILMN_41038	LOC652341	XM_941768.2	XM_941768.2		652341	113430951	XM_941768.2	LOC652341	XP_946861.2	ILMN_1748792	0006580133	S	120	GGCCAAGCTGGTGTGCCTGGTATGCTTGGTCTTCACAGGGATTTTCACAG					PREDICTED: Homo sapiens similar to voltage-gated sodium channel type V alpha isoform b (LOC652341), mRNA.					
Homo sapiens	RefSeq	NM_207313.1	ILMN_1040	TMEM132E	NM_207313.1	NM_207313.1		124842	46560554	NM_207313.1	TMEM132E	NP_997196.1	ILMN_1772514	0004220546	S	4044	TTGCCTTCCCCGTCCCCCACAGCAAGGTCAACACTACTACGCCTTAGCCA	17	+	29990125-29990174	17q12a	Homo sapiens transmembrane protein 132E (TMEM132E), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_022840.2	ILMN_16027	METTL4	NM_022840.3	NM_022840.3		64863	145275205	NM_022840.3	METTL4	NP_073751.3	ILMN_1738173	0000730110	S	3267	CTTTTGCAGTCAATCCCCTGCTCCTATCCTTGGCCCCTGGCAAACACTGG	18	-	2544814-2544863	18p11.32a	Homo sapiens methyltransferase like 4 (METTL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC117235; FLJ23017; HsT661	FLJ23017; HsT661
Homo sapiens	RefSeq	NM_014646.2	ILMN_163521	LPIN2	NM_014646.2	NM_014646.2		9663	22027649	NM_014646.2	LPIN2	NP_055461.1	ILMN_2133100	0007650138	S	5768	GGCACTGCAGGTGCAGGCCAACCCTTTAAAGAATAAACAAGGAAGTCAGC	18	-	2919352-2919401	18p11.31e	Homo sapiens lipin 2 (LPIN2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]	KIAA0249	KIAA0249
Homo sapiens	RefSeq	NM_014646.2	ILMN_163521	LPIN2	NM_014646.2	NM_014646.2		9663	22027649	NM_014646.2	LPIN2	NP_055461.1	ILMN_1670028	0000510224	S	5676	AACCGAGGGACAAAGGAGATTGGATGACTGGGAAGCGCTGGCCCGGAACA	18	-	2919444-2919493	18p11.31e	Homo sapiens lipin 2 (LPIN2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]	KIAA0249	KIAA0249
Homo sapiens	RefSeq	XM_927019.1	ILMN_35157	LOC643731	XM_927019.1	XM_927019.1		643731	89031577	XM_927019.1	LOC643731	XP_932112.1	ILMN_1666118	0000840338	S	1	ATGGTGATGCTGAAGGATCAGCGGATGACTGTGGTGGGATGGCTAGAAGG	10	-	93516195-93516244		PREDICTED: Homo sapiens similar to protein expressed in T-cells and eosinophils in atopic dermatitis (LOC643731), mRNA.					
Homo sapiens	RefSeq	NM_007042.1	ILMN_24312	RPP14	NM_007042.1	NM_007042.1		11102	5902065	NM_007042.1	RPP14	NP_008973.1	ILMN_1725969	0005340474	S	1257	TGATAGGCCCAGAAGCCCATGTTAGTTAGGGGAAGGGAGCAGGAAGAGGG	3	+	58278990-58279039	3p14.3a	Homo sapiens ribonuclease P 14kDa subunit (RPP14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10024167] [evidence TAS]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10024167] [evidence TAS]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15096576] [evidence IPI]	P14	P14
Homo sapiens	RefSeq	NM_004347.1	ILMN_8232	CASP5	NM_004347.1	NM_004347.1		838	4757913	NM_004347.1	CASP5	NP_004338.1	ILMN_1722158	0003390121	S	1211	GTTCCACAGGCTAAAGCCCAGATGCCCACCATAGAACGAGCAACCTTGAC	11	-	104371710-104371759	11q22.3b	Homo sapiens caspase 5, apoptosis-related cysteine peptidase (CASP5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 7797592] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418785] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	ICEREL-III; ICE(rel)III; MGC141966; ICH-3	ICEREL-III; ICE(rel)III; MGC141966; ICH-3
Homo sapiens	Unigene	Hs.576153	ILMN_128334	HS.576153	Hs.576153		Hs.576153		83149130	DB338108			ILMN_1904192	0006290746	S	244	CTGTGAGGGGCAAAGGGAGAAAGCTCAGTCCTTGAAACACACAAGACACC	1	+	53569801-53569850		DB338108 TESTI2 Homo sapiens cDNA clone TESTI2032725 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002367.2	ILMN_2182	MAGEB4	NM_002367.2	NM_002367.2		4115	29171715	NM_002367.2	MAGEB4	NP_002358.1	ILMN_1808418	0006620195	S	2078	GTGAAAAGGAAATTACCTTGCAATAAAGTTGGTGGGACCAGGAAGTAGAG	X	+	30172167-30172216	Xp21.2a	Homo sapiens melanoma antigen family B, 4 (MAGEB4), mRNA.				MGC33144	MGC33144
Homo sapiens	RefSeq	XM_001726677.1	ILMN_345422	LOC100131649	XM_001726677.1	XM_001726677.1		100131649	169211003	XM_001726677.1	LOC100131649	XP_001726729.1	ILMN_3287722	0003140554	M	2576	GTGCTGGGATTACAGGGGTGAGCCACCACATCAGGCCTAATAGCCATACT	17	-	50384618-50384667	17q22b	PREDICTED: Homo sapiens hypothetical protein LOC100131649 (LOC100131649), mRNA.					
Homo sapiens	RefSeq	NM_002622.3	ILMN_32647	PFDN1	NM_002622.4	NM_002622.4		5201	88999575	NM_002622.4	PFDN1	NP_002613.2	ILMN_1717855	0006180170	S	873	CTTTTCCCTTCCTGTACCTTTGACTAACGCTCAGCTTCCGGGCCTGCATG	5	-	139625352-139625401	5q31.3a	Homo sapiens prefoldin subunit 1 (PFDN1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 8744932] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8744932] [evidence TAS]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	PDF; PFD1	PDF; PFD1
Homo sapiens	RefSeq	NM_001264.3	ILMN_181095	CDSN	NM_001264.3	NM_001264.3		1041	67782355	NM_001264.3	CDSN	NP_001255.3	ILMN_1727880	0002140131	S	2332	CTGGATCCTGGACAGATGGCTCAGTAAACTGTGGGGACTAGGTGCAGACT	6	-	31191016-31191065	6p21.33a	Homo sapiens corneodesmosin (CDSN), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [pmid 9395522] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A specialised type of cell junction into which intermediate filaments of adjacent cells are inserted. This type of cell junction is characteristic of epithelia. Desmosomes are particularly conspicuous in tissues such as skin that have to withstand mechanical stress [goid 30057] [pmid 9395522] [evidence NAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 9395522] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 11739386] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [pmid 8415725] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15086562] [evidence IDA]	S; HTSS; D6S586E	S; HTSS; D6S586E
Homo sapiens	RefSeq	XM_001725832.1	ILMN_345620	LOC100129285	XM_001725832.1	XM_001725832.1		100129285	169166017	XM_001725832.1	LOC100129285	XP_001725884.1	ILMN_3265183	0006760215	M	818	CAGCTTAGGCTAAAGCCCCAGAGCTCCCACCTTCTACCTCCTGTTTATCC				3q26.1b	PREDICTED: Homo sapiens hypothetical protein LOC100129285 (LOC100129285), mRNA.					
Homo sapiens	RefSeq	NM_006176.1	ILMN_10939	NRGN	NM_006176.1	NM_006176.1		4900	5453799	NM_006176.1	NRGN	NP_006167.1	ILMN_1705686	0006290747	S	961	GATCCGGGGCGAGATGAAGGGAAGAGGGTTGTTTTGGTTTCGGACGACCC	11	+	124121971-124122020	11q24.2a	Homo sapiens neurogranin (protein kinase C substrate, RC3) (NRGN), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10075657] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10075657] [evidence TAS]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 10075657] [evidence TAS]	RC3; hng	RC3; hng
Homo sapiens	RefSeq	NM_024787.2	ILMN_16492	RNF122	NM_024787.2	NM_024787.2		79845	38045930	NM_024787.2	RNF122	NP_079063.2	ILMN_1691119	0000130605	S	1760	CCAGAATGGAAGGGGGTGGGGATTTTCTGTTCCTCCCTGGAGTGGGTGAG	8	-	33524873-33524922	8p12c	Homo sapiens ring finger protein 122 (RNF122), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126622; FLJ12526	MGC126622; FLJ12526
Homo sapiens	RefSeq	NM_014522.1	ILMN_11465	PCDH11X	NM_014522.1	NM_014522.1		27328	7657442	NM_014522.1	PCDH11X	NP_055337.1	ILMN_2249769	0007560398	I	4338	ATTCAGCACCAAGTTATTCCCCCCATACTCTACCAGGCCTTCAGGTCCTC	X	+	91021388-91021437	Xq21.31e	Homo sapiens protocadherin 11 X-linked (PCDH11X), transcript variant a, mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10644456] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10644456] [evidence TAS]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH11; PCDH-X; PCDHY; PCDHX	PCDH11; PCDH-X; PCDHY; PCDHX
Homo sapiens	RefSeq	NM_170783.1	ILMN_1419	ZNRD1	NM_170783.1	NM_170783.1		30834	25777706	NM_170783.1	ZNRD1	NP_740753.1	ILMN_1692486	0004060255	A	508	CTGTGGTTGACAGGCGCTGCCCTCGATGTGGTCATGAAGGAATGGCATAC	6	+	30137769-30137773:30137980-30138024	6p21.33b	Homo sapiens zinc ribbon domain containing 1 (ZNRD1), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	hZR14; tctex-6; MGC13376; Rpa12; HTEX-6	hZR14; tctex-6; MGC13376; Rpa12; HTEX-6
Homo sapiens	RefSeq	NM_170783.1	ILMN_1419	ZNRD1	NM_170783.1	NM_170783.1		30834	25777706	NM_170783.1	ZNRD1	NP_740753.1	ILMN_1722894	0004050673	I	166	TATACTCCTAGGTCCTGGGACAGAATAGTTACGACCTCTGGGACAGGAAC	6	+	30137180-30137229	6p21.33b	Homo sapiens zinc ribbon domain containing 1 (ZNRD1), transcript variant a, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	hZR14; tctex-6; MGC13376; Rpa12; HTEX-6	hZR14; tctex-6; MGC13376; Rpa12; HTEX-6
Homo sapiens	RefSeq	XM_001719525.1	ILMN_337563	LOC100131591	XM_001719525.1	XM_001719525.1		100131591	169167100	XM_001719525.1	LOC100131591	XP_001719577.1	ILMN_3202242	0002370086	A	215	GAGGGCCTGGGCAATGCCGGCATCTGCTTCGGAACCGCAGGGGTTTTCGT				4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100131591 (LOC100131591), mRNA.					
Homo sapiens	RefSeq	XM_932044.1	ILMN_34066	LOC440341	XM_932044.1	XM_932044.1		440341	89039758	XM_932044.1	LOC440341	XP_937137.1	ILMN_1673933	0000870037	A	2518	AACATTCTATAATTGATAACTCCCTGAGCCTCAAGACACCTTCCGAGCTG	16	-	15365206-15365208:15365265-15365311		PREDICTED: Homo sapiens similar to nuclear pore complex interacting protein, transcript variant 4 (LOC440341), mRNA.					
Homo sapiens	RefSeq	NM_021948.3	ILMN_180803	BCAN	NM_021948.3	NM_021948.3		63827	38372934	NM_021948.3	BCAN	NP_068767.3	ILMN_1732154	0002100446	I	3281	CTTCCATCAGGGCCGGAGTAAATCCCTAAGTGCCTCAACTGCCCTCTCCC	1	+	154895759-154895808	1q23.1a	Homo sapiens brevican (BCAN), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]	BEHAB; MGC13038; CSPG7	BEHAB; MGC13038; CSPG7
Homo sapiens	RefSeq	NM_198427.1	ILMN_180803	BCAN	NM_021948.3	NM_021948.3		63827	38372934	NM_021948.3	BCAN	NP_068767.3	ILMN_1680300	0001170215	A	2012	TGGTTGAGGCAAGAGAGGTGGGGGAGGCAACTGGTGGTCCTGAGCTATCT	1	+	154889042-154889091	1q23.1a	Homo sapiens brevican (BCAN), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]	BEHAB; MGC13038; CSPG7	BEHAB; MGC13038; CSPG7
Homo sapiens	RefSeq	XM_940235.1	ILMN_180402	PRKDC	NM_001081640.1	NM_001081640.1		5591	126032349	NM_001081640.1	PRKDC	NP_001075109.1	ILMN_1797499	0003850020	S	11428	TATAGCGTTGTGCCCATGACCTCCAGTGATCCCAGGGCACCGCCGTGTGA	8	-	48866206-48866255	8q11.21a-q11.21b	Homo sapiens protein kinase, DNA-activated, catalytic polypeptide (PRKDC), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12065431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12023295] [evidence EXP]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [pmid 15194694] [evidence IDA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pro-B cell. Pro-B cells are the earliest stage of the B cell lineage and undergo heavy chain D and J gene rearrangements, although they are not fully committed [goid 2328] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 7671312] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [pmid 15194694] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, requiring the presence of DNA [goid 4677] [pmid 15194694] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442054] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	XRCC7; p350; DNPK1; HYRC1; HYRC; DNAPK	
Homo sapiens	RefSeq	NM_006904.6	ILMN_180402	PRKDC	NM_001081640.1	NM_001081640.1		5591	126032349	NM_001081640.1	PRKDC	NP_001075109.1	ILMN_1769517	0000770390	S	13264	CCCCCCGCCAGTCCTCCACACCCAAACTGTTTCTGATTGGCTTTTAGCTT	8	-	48851959-48852008	8q11.21a-q11.21b	Homo sapiens protein kinase, DNA-activated, catalytic polypeptide (PRKDC), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12065431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12023295] [evidence EXP]; A large protein complex which is involved in the repair of DNA double-strand breaks and V(D)J recombination events. In mammals, it consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs), the DNA end-binding heterodimer, Ku, the nuclear phosphoprotein XRCC4 and DNA ligase IV [goid 5958] [pmid 15194694] [evidence IDA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a pro-B cell. Pro-B cells are the earliest stage of the B cell lineage and undergo heavy chain D and J gene rearrangements, although they are not fully committed [goid 2328] [evidence IEA]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 7671312] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [pmid 15194694] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IEA]; The process by which immunoglobulin heavy chain V, D, and J gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin light chains the same process is used to join V and J gene segments directly [goid 33152] [evidence IEA]; The process by which T cell receptor V, D, and J, or V and J gene segments, depending on the specific locus, are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS) [goid 33153] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, requiring the presence of DNA [goid 4677] [pmid 15194694] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442054] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	XRCC7; p350; DNPK1; HYRC1; HYRC; DNAPK	XRCC7; p350; DNPK1; HYRC1; HYRC; DNAPK
Homo sapiens	RefSeq	NM_139170.2	ILMN_14590	C16ORF71	NM_139170.2	NM_139170.2		146562	59710084	NM_139170.2	C16orf71	NP_631909.2	ILMN_1683370	0001090767	S	2367	CATTGCAAGTCAAAGGCAAGACAGGCTTCCATAAAGTCCCAGGAGGTCCC	16	+	4739059-4739108	16p13.3b	Homo sapiens chromosome 16 open reading frame 71 (C16orf71), mRNA.				DKFZp686H2240; FLJ43261	DKFZp686H2240; FLJ43261
Homo sapiens	RefSeq	NM_001037293.1	ILMN_14799	PALM2	NM_001037293.1	NM_001037293.1		114299	82617625	NM_001037293.1	PALM2	NP_001032370.1	ILMN_2369403	0003780022	A	9038	GGTGGGAGCCTGTCGTGCTTACTCTGAATTAGCTTACTGGGCTAGCTGCT	9	+	111753354-111753403	9q31.3a	Homo sapiens paralemmin 2 (PALM2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IEA]	AKAP2	AKAP2
Homo sapiens	Unigene	Hs.111539	ILMN_75105	HS.111539	Hs.111539		Hs.111539		27840407	BX117133			ILMN_1831111	0002600132	S	335	TTCATGCAGAGAGTTGTGCCAGGGGGACCCAGGGGGCTCTTTGAGGGCTG	20	-	61363027-61363076		BX117133 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGp998M0769, mRNA sequence					
Homo sapiens	RefSeq	NR_002775.1	ILMN_11391	RPLP0P2	NR_002775.1	NR_002775.1		113157	84872060	NR_002775.1	RPLP0P2		ILMN_2208491	0002070541	S	2934	ATGTGCGCCGCCACGCCCGGCTAACTTTTGTATTTTTAGTAGAGACGGGT	11	+	61162906-61162955	11q12.2b	Homo sapiens ribosomal protein, large, P0 pseudogene 2 (RPLP0P2), non-coding RNA.				RPLP0L2	RPLP0L2
Homo sapiens	RefSeq	XR_039228.1	ILMN_335428	LOC400013	XR_039228.1	XR_039228.1		400013	169204601	XR_039228.1	LOC400013		ILMN_3199609	0006330343	A	1321	CCTAATACACTGGCAGTTAATGCTGCCCAGGACTCCACAGATCTGGTCAC				12p12.2a	PREDICTED: Homo sapiens misc_RNA (LOC400013), miscRNA.					
Homo sapiens	RefSeq	XM_932631.1	ILMN_42654	LOC339047	XM_932631.1	XM_932631.1		339047	89039940	XM_932631.1	LOC339047	XP_937724.1	ILMN_1666642	0007650563	I	6998	CGCCCTGAAAGGACCAGGACATGCGGGTGCGGTGGCTGCTCTTTTGGCTC	16	+	16338037-16338086	16p13.11b	PREDICTED: Homo sapiens hypothetical protein LOC339047, transcript variant 81 (LOC339047), mRNA.					
Homo sapiens	RefSeq	XM_926293.1	ILMN_30788	LOC653163	XM_926293.1	XM_926293.1		653163	89030014	XM_926293.1	LOC653163	XP_931386.1	ILMN_1716872	0002900184	S	61	TCAGTCACCTGTGCCAGGTCCCCGGGGGATCCTGAGCCCAGCGGTATAAA	9	+	135174321-135174370	9q34.2a	PREDICTED: Homo sapiens similar to Von Ebners gland protein precursor (VEG protein) (Tear prealbumin) (TP) (Tear lipocalin) (Lipocalin 1) (LOC653163), mRNA.					
Homo sapiens	RefSeq	XM_937836.1	ILMN_32924	LOC648751	XM_937836.1	XM_937836.1		648751	89037128	XM_937836.1	LOC648751	XP_942929.1	ILMN_1662103	0002060685	S	217	CATCCTGCTCTCAACTATAACATTGGCGGCGGCTGGGCAGAGGCCCTCCT					PREDICTED: Homo sapiens similar to serine palmitoyltransferase subunit 1 isoform b (LOC648751), mRNA.					
Homo sapiens	RefSeq	XM_001726979.1	ILMN_352826	LOC646805	XM_001726979.1	XM_001726979.1		646805	169209889	XM_001726979.1	LOC646805	XP_001727031.1	ILMN_3219843	0005290612	A	226	AAGTGTCAAGACCCACTGGCTATCTACTTCACCAGCGGAACCACCGGGGA	16	-	20521180-20521229	16p12.2c	PREDICTED: Homo sapiens hypothetical LOC646805 (LOC646805), mRNA.					
Homo sapiens	RefSeq	XM_001726979.1	ILMN_352826	LOC646805	XM_001726979.1	XM_001726979.1		646805	169209889	XM_001726979.1	LOC646805	XP_001727031.1	ILMN_3296372	0006180523	M	964	GGTTCATGGGAAGAAACGACGATCTACCAGATCGGGCCTGTTGAAGTAGA	16	-	20509417-20509444:20509550-20509571	16p12.2c	PREDICTED: Homo sapiens hypothetical LOC646805 (LOC646805), mRNA.					
Homo sapiens	RefSeq	NM_020745.1	ILMN_23137	AARS2	NM_020745.2	NM_020745.2		57505	145199235	NM_020745.2	AARS2	NP_065796.1	ILMN_1674698	0000540255	S	3701	GGCAGACAAAGGGCTCCCTGGCTACTGGGAAGATACAGAACCATCCTGTG	6	-	44375472-44375521	6p21.1b	Homo sapiens alanyl-tRNA synthetase 2, mitochondrial (putative) (AARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6419] [evidence IEA]; The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, usually catalyzed by the cognate aminoacyl-tRNA ligase. A given aminoacyl-tRNA ligase aminoacylates all species of an isoaccepting group of tRNA molecules [goid 43039] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala) [goid 4813] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	KIAA1270; AARSL; bA444E17.1	KIAA1270; bA444E17.1
Homo sapiens	RefSeq	XM_375931.3	ILMN_42926	LOC400858	XM_375931.3	XM_375931.3		400858	89061697	XM_375931.3	LOC400858	XP_375931.3	ILMN_1813362	0000610646	S	6	CCCTCATTTACCACAAGGGAAAGCTTTACAAAAACCCACAGAGGTACCTG					PREDICTED: Homo sapiens similar to PRED4 (LOC400858), mRNA.					
Homo sapiens	RefSeq	XM_942581.1	ILMN_38536	LOC652869	XM_942581.1	XM_942581.1		652869	89065103	XM_942581.1	LOC652869	XP_947674.1	ILMN_1759612	0005810133	S	1	ATGGATCGGCCTTATCCTCACCACCCCCCATACGAGTCTCCTCTGGTTGC					PREDICTED: Homo sapiens similar to E2F transcription factor 6 isoform 1 (LOC652869), mRNA.					
Homo sapiens	Unigene	Hs.314177	ILMN_85921	HS.314177	Hs.314177		Hs.314177		13048527	BG290999			ILMN_1823468	0000360521	S	558	GGACCCACAGTACCTCATTAGATGCCCTTGGGAACCAGGATGGTGCATTG	17	-	46621594-46621595:46621609-46621614:46621616-46621624:46621628-46621630:46621632-46621661		602386991F1 NIH_MGC_93 Homo sapiens cDNA clone IMAGE:4515839 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001013724.1	ILMN_171216	LOC441233	XR_017856.1	XR_017856.1		441233	113418555	XR_017856.1	LOC441233		ILMN_1663962	0006370564	S	2100	CTGTCCCCTCTTCAACTTGGACTCAATCACTCCACAGGTCTCTAAGACTC	7	-	57474216-57474265	7p11.1b	PREDICTED: Homo sapiens hypothetical gene supported by AK128010 (LOC441233), misc RNA.					
Homo sapiens	RefSeq	XR_000910.1	ILMN_138388	LOC338799	XR_000910.1	XR_000910.1		338799	89035761	XR_000910.1	LOC338799		ILMN_1788887	0002970338	A	1299	AGGCAACTCCATGATCTGACCCCGGTTACCTTGACAGCCCTGCCTGGCCT	12	-	120717809-120717858	12q24.31b	PREDICTED: Homo sapiens hypothetical locus LOC338799, transcript variant 3 (LOC338799), misc RNA.					
Homo sapiens	RefSeq	XM_001720501.1	ILMN_341542	LOC729273	XM_001720501.1	XM_001720501.1		729273	169172771	XM_001720501.1	LOC729273	XP_001720553.1	ILMN_3240871	0003310605	S	1412	CATGATGGGATATCCCTGCCTAGATCTTTCAGTGAGTCTCTACCTCAGCT	8	-	7122190-7122239	8p23.1f	PREDICTED: Homo sapiens hypothetical LOC729273 (LOC729273), mRNA.					
Homo sapiens	RefSeq	NM_005219.3	ILMN_168717	DIAPH1	NM_005219.3	NM_005219.3		1729	119395757	NM_005219.3	DIAPH1	NP_005210.3	ILMN_2321416	0003940670	A	5456	AGCAGCTCCTTTGGACTATTCCTGGGAGGACTCTGATGCAGGGCGTCTGT	5	-	140874997-140875046	5q31.3c	Homo sapiens diaphanous homolog 1 (Drosophila) (DIAPH1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9360932] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9360932] [evidence NAS]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	LFHL1; hDIA1; DFNA1; FLJ25265; DRF1	LFHL1; hDIA1; DFNA1; FLJ25265; DRF1
Homo sapiens	RefSeq	NM_002952.3	ILMN_28396	RPS2	NM_002952.3	NM_002952.3		6187	70609878	NM_002952.3	RPS2	NP_002943.2	ILMN_2218277	0005220037	S	308	TTTCTTCCTGGGGGCCTCTCTCAAGGATGAGGTTTTGAAGATTATGCCAG	16	-	2013190-2013239	16p13.3e	Homo sapiens ribosomal protein S2 (RPS2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16263090] [evidence IPI]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16061210] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16263090] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 16061210] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 16263090] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15473865] [evidence IPI]; Interacting selectively with fibroblast growth factor 1 [goid 48602] [pmid 16263090] [evidence IPI]; Interacting selectively with fibroblast growth factor 3 [goid 48604] [pmid 16263090] [evidence IPI]	MGC102851; MGC117344; MGC117345; LLREP3	MGC102851; LLREP3; MGC117344; MGC117345
Homo sapiens	RefSeq	XM_929644.1	ILMN_31764	LOC646698	XM_929644.2	XM_929644.2		646698	113428367	XM_929644.2	LOC646698	XP_934737.2	ILMN_1793949	0007560270	S	727	CGGTTCAACAGGATGTTCTCCTTGAAGTGTCACAAGAGGAGCCACACGGG	19	+	61450430-61450479	19q13.43a	PREDICTED: Homo sapiens similar to zinc finger and SCAN domain containing 5 (LOC646698), mRNA.					
Homo sapiens	RefSeq	XM_927693.1	ILMN_31925	LOC642962	XM_927693.1	XM_927693.1		642962	88961370	XM_927693.1	LOC642962	XP_932786.1	ILMN_1714399	0007050608	S	65	CAGAACAGGAGTCCTCTTCTGCTTTTACTTCCTGCCCAGACCTGCCCGGG	3	-	11581044-11581093		PREDICTED: Homo sapiens hypothetical protein LOC642962 (LOC642962), mRNA.					
Homo sapiens	RefSeq	XM_942460.1	ILMN_36886	LOC652799	XM_942460.1	XM_942460.1		652799	89064525	XM_942460.1	LOC652799	XP_947553.1	ILMN_1796919	0004150398	S	593	GTCGACTCGATCCCATCCTGCCAAAGTTTGTGATTCCACATTTCTCTTCC					PREDICTED: Homo sapiens similar to Mast/stem cell growth factor receptor precursor (SCFR) (Proto-oncogene tyrosine-protein kinase Kit) (c-kit) (CD117 antigen) (LOC652799), mRNA.					
Homo sapiens	Unigene	Hs.570267	ILMN_122448	HS.570267	Hs.570267		Hs.570267		50718398	BP872784			ILMN_1911484	0006290398	S	347	CAGATCATTCTGTACTCCTAACAAGGTCCACCCCATGAGAGACTTGCAGC	2	+	165413914-165413963		BP872784 Sugano cDNA library, embryonal kidney Homo sapiens cDNA clone HKR09061, mRNA sequence					
Homo sapiens	RefSeq	NM_021007.2	ILMN_28861	SCN2A	NM_021007.2	NM_021007.2		6326	93141209	NM_021007.2	SCN2A	NP_066287.2	ILMN_2271762	0000580189	I	241	TAGCTGCAGTCTTCTTGGTGCCAGCTTATCAATCCCAAACTCTGGGTGTA	2	+	165858827-165858876	2q24.3c	Homo sapiens sodium channel, voltage-gated, type II, alpha subunit (SCN2A), transcript variant 1, mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 1325650] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 1325650] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NAC2; HBSCI; SCN2A2; HBSCII; SCN2A1; Na(v)1.2; HBA; Nav1.2	HBSCII; Nav1.2
Homo sapiens	RefSeq	NM_021007.2	ILMN_28861	SCN2A	NM_021007.2	NM_021007.2		6326	93141209	NM_021007.2	SCN2A	NP_066287.2	ILMN_2366915	0003290465	A	6416	AGCCCGTGATGGTGATGTGTTTGTGTCAACAGGACTCCCACAGGAGGTCT	2	+	165954622-165954671	2q24.3c	Homo sapiens sodium channel, voltage-gated, type II, alpha subunit (SCN2A), transcript variant 1, mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 1325650] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 1325650] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NAC2; HBSCI; SCN2A2; HBSCII; SCN2A1; Na(v)1.2; HBA; Nav1.2	HBSCII; Nav1.2
Homo sapiens	RefSeq	NM_053050.2	ILMN_25576	MRPL53	NM_053050.2	NM_053050.2		116540	22035595	NM_053050.2	MRPL53	NP_444278.1	ILMN_1813682	0002750309	S	372	GGCGCTCATCTCACCGCTCTGGAAATGCTCACCGCCTTCGCCTCCCACAT	2	-	74552811-74552860	2p13.1b	Homo sapiens mitochondrial ribosomal protein L53 (MRPL53), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]			MGC20402; FLJ90728	MGC20402; FLJ90728
Homo sapiens	RefSeq	NM_014396.2	ILMN_2386	VPS41	NM_014396.2	NM_014396.2		27072	18105059	NM_014396.2	VPS41	NP_055211.1	ILMN_1703379	0006560484	A	3193	GTTCTGTGTGCTGTGACGACTGTCAAAGAGTATCTGGCCATGGCGGACAC	7	-	38731719-38731768	7p14.1d	Homo sapiens vacuolar protein sorting 41 (yeast) (VPS41), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11412045] [evidence IDA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [pmid 11412045] [evidence IMP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11412045] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles [goid 48193] [pmid 11412045] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HVSP41	HVSP41
Homo sapiens	RefSeq	NM_014747.2	ILMN_21581	RIMS3	NM_014747.2	NM_014747.2		9783	48476343	NM_014747.2	RIMS3	NP_055562.2	ILMN_1742382	0004040189	S	7056	GTGCAGCATCTTTCCTAACTTGTTGTGGTTCCCGGGTGGCAGGTGCACAG	1	-	41086475-41086524	1p34.2c	Homo sapiens regulating synaptic membrane exocytosis 3 (RIMS3), mRNA.	A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	RIM3; NIM3; KIAA0237	RIM3; NIM3; KIAA0237
Homo sapiens	Unigene	Hs.561960	ILMN_115202	HS.561960	Hs.561960		Hs.561960		19002777	BM689519			ILMN_1874446	0001820164	S	279	TCTGCCCTGCAGCATGACCAAGGGGTCTTGGAGAGAATGTTCTGGGTGTG	9	+	2724563-2724612		UI-E-CK1-abk-e-12-0-UI.r1 UI-E-CK1 Homo sapiens cDNA clone UI-E-CK1-abk-e-12-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	XM_929125.1	ILMN_44210	LOC651149	XM_940278.1	XM_940278.1		651149	89033651	XM_940278.1	LOC651149	XP_945371.1	ILMN_1660439	0006590446	S	121	GTCCACCTCACAGCTCTCCTGGGATACAAAGCTGGCATGACCCACATCCT					PREDICTED: Homo sapiens similar to 60S ribosomal protein L3 (L4) (LOC651149), mRNA.					
Homo sapiens	RefSeq	NM_003007.2	ILMN_171883	SEMG1	NM_003007.2	NM_003007.2		6406	38049012	NM_003007.2	SEMG1	NP_002998.1	ILMN_2312498	0006290445	A	1476	TTCTGTGATGTTTCTGAGATGCAGACTCCCGTGTAGTTTCAGATTCTTGG	20	+	43271677-43271726	20q13.12b	Homo sapiens semenogelin I (SEMG1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1517240] [evidence TAS]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	The introduction of semen or sperm into the genital tract of a female [goid 7320] [pmid 2912989] [evidence TAS]; The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times [goid 19953] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	SEMG; SGI; MGC14719	SEMG; SGI; MGC14719
Homo sapiens	RefSeq	NM_013280.4	ILMN_21458	FLRT1	NM_013280.4	NM_013280.4		23769	48762940	NM_013280.4	FLRT1	NP_037412.2	ILMN_1685056	0001990044	S	3035	GAAGCCCTCTTCAGTTCCATGCACCACGCTCCGTAGAAGCCCCGGCGGAA	11	+	63643009-63643058	11q13.1a	Homo sapiens fibronectin leucine rich transmembrane protein 1 (FLRT1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10644439] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10644439] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	 [goid 5057] [pmid 10644439] [evidence NAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 10644439] [evidence NAS]	MGC21624	MGC21624
Homo sapiens	RefSeq	XM_936233.1	ILMN_33519	LOC642103	XM_936233.1	XM_936233.1		642103	89026474	XM_936233.1	LOC642103	XP_941326.1	ILMN_1712999	0005890386	S	4465	GGAGTGGGCAGTGTCCCCGTTACCAGTGTCAGCATCTCTGTGAGTGGCAT					PREDICTED: Homo sapiens similar to Maltase-glucoamylase, intestinal (LOC642103), mRNA.					
Homo sapiens	RefSeq	NM_024974.1	ILMN_23101	FAM106A	NM_024974.1	NM_024974.1		80039	13376473	NM_024974.1	FAM106A	NP_079250.1	ILMN_1811644	0004060243	S	1921	AGTAGAAATGAGGTCTCGCCATGTTGCTCAGACTGGTCTTGAACCAACAC	17	-	18368915-18368964	17p11.2f	Homo sapiens family with sequence similarity 106, member A (FAM106A), mRNA.				FLJ11800	FLJ11800
Homo sapiens	RefSeq	NM_001111101.1	ILMN_344369	CNRIP1	NM_001111101.1	NM_001111101.1		25927	161783806	NM_001111101.1	CNRIP1	NP_001104571.1	ILMN_3187324	0000290615	A	932	TGACCCCAACGAAGAGTGGAGAACGGCAACCCATCCAGATCACCATGCCG	2	-	68511616-68511616:68544289-68544337	2p14a	Homo sapiens cannabinoid receptor interacting protein 1 (CNRIP1), transcript variant CRIP1b, mRNA.				DKFZp566K1924; CRIP1; C2orf32	DKFZp566K1924; CRIP1; C2orf32
Homo sapiens	RefSeq	NM_001111101.1	ILMN_344369	CNRIP1	NM_001111101.1	NM_001111101.1		25927	161783806	NM_001111101.1	CNRIP1	NP_001104571.1	ILMN_3232701	0000830747	I	1108	GCATTCTAGGGGAGGGCTTCTCACAGGCCATCAGAATTATCGGGGATGCT	2	-	68511440-68511489	2p14a	Homo sapiens cannabinoid receptor interacting protein 1 (CNRIP1), transcript variant CRIP1b, mRNA.				DKFZp566K1924; CRIP1; C2orf32	DKFZp566K1924; CRIP1; C2orf32
Homo sapiens	Unigene	Hs.553231	ILMN_111292	HS.553231	Hs.553231		Hs.553231		21983221	BQ774745			ILMN_1869874	0006180646	S	346	CTCTTCCTCTCCCCCAACTCAGGCTTGATCTGTAGCCCAAGGAACTCACC	15	+	37874873-37874922		UI-H-FH0-bcd-a-22-0-UI.s1 NCI_CGAP_FH0 Homo sapiens cDNA clone UI-H-FH0-bcd-a-22-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NR_031626.1	ILMN_388553	MIR1294	NR_031626.1	NR_031626.1		100302181	269847168	NR_031626.1	MIR1294		ILMN_3309359	0000160739	S	92	GCCAACCTCACAGGACTCAGTGAGGTGAAACTGAGGATTAGGAAGGTGTA					Homo sapiens microRNA 1294 (MIR1294), microRNA.					
Homo sapiens	RefSeq	XM_929858.1	ILMN_38182	LOC646895	XM_929858.2	XM_929858.2		646895	113428175	XM_929858.2	LOC646895	XP_934951.2	ILMN_1667582	0007560682	S	355	AAACATAAGAGAATTCATACTAGAGGGAAACATTACAAGTGTGAAGAAAG	19	+	23806912-23806961	19p12b	PREDICTED: Homo sapiens similar to zinc finger protein 539 (LOC646895), mRNA.					
Homo sapiens	RefSeq	XM_938674.1	ILMN_38182	LOC646895	XM_929858.2	XM_929858.2		646895	113428175	XM_929858.2	LOC646895	XP_934951.2	ILMN_1671433	0000830102	S	375	TAGAGGGAAACATTACAAGTGTGAAGAAAGTGGCAAAGCATTTATCTGGT	19	+	23806932-23806981	19p12b	PREDICTED: Homo sapiens similar to zinc finger protein 539 (LOC646895), mRNA.					
Homo sapiens	RefSeq	NM_003372.4	ILMN_9083	VBP1	NM_003372.4	NM_003372.4		7411	66346740	NM_003372.4	VBP1	NP_003363.1	ILMN_1800612	0005360221	S	1084	GCTATGGAAGCTGAATGCCGGACGCTAGCACAGTTTACTTTTTCCCTTTC	X	+	154120597-154120646	Xq28h	Homo sapiens von Hippel-Lindau binding protein 1 (VBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8674032] [evidence TAS]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	VBP-1; PFD3; PFDN3	VBP-1; PFD3; PFDN3
Homo sapiens	RefSeq	NM_003372.4	ILMN_9083	VBP1	NM_003372.4	NM_003372.4		7411	66346740	NM_003372.4	VBP1	NP_003363.1	ILMN_2223010	0004860358	S	1624	CCCTGTGGAAAGCTACTAGTACATTGACCAGCGCTGGGTGATACAGATTC	X	+	154121137-154121186	Xq28h	Homo sapiens von Hippel-Lindau binding protein 1 (VBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8674032] [evidence TAS]; A multisubunit chaperone that acts to delivers unfolded proteins to cytosolic chaperonin. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits [goid 16272] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	VBP-1; PFD3; PFDN3	VBP-1; PFD3; PFDN3
Homo sapiens	RefSeq	XM_497554.1	ILMN_28700	LOC441799	XM_497554.1	XM_497554.1		441799	51474356	XM_497554.1	LOC441799	XP_497554.1	ILMN_1667062	0005490047	A	311	GCTCAGTTTCCCTAGATGGCCCCGCTCCAAGAACAGCTCAGAAGCCAAGG	17	-	62716153-62716202		PREDICTED: Homo sapiens similar to Keratin, type I cytoskeletal 18 (Cytokeratin-18) (CK-18) (Keratin-18) (K18) (LOC441799), mRNA.					
Homo sapiens	RefSeq	NM_005390.3	ILMN_176747	PDHA2	NM_005390.3	NM_005390.3		5161	38492354	NM_005390.3	PDHA2	NP_005381.1	ILMN_2068951	0001820630	S	1100	TGCCCAGTTTGCTACCACTGATCCTGAGCCACATTTGGAAGAATTAGGCC	4	+	96981365-96981414	4q22.3b	Homo sapiens pyruvate dehydrogenase (lipoamide) alpha 2 (PDHA2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2 [goid 4739] [pmid 2249846] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC149518; MGC149517; PDHAL	MGC149518; MGC149517; PDHAL
Homo sapiens	RefSeq	NM_152998.1	ILMN_20896	EZH2	NM_152998.1	NM_152998.1		2146	23510383	NM_152998.1	EZH2	NP_694543.1	ILMN_2364529	0004180524	A	1785	AGTGTGACCCTGACCTCTGTCTTACTTGTGGAGCCGCTGACCATTGGGAC	7	-	148511101-148511150	7q36.1a	Homo sapiens enhancer of zeste homolog 2 (Drosophila) (EZH2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [pmid 15385962] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8921387] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8954776] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17560333] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	EZH1; ENX-1; MGC9169; KMT6	EZH1; ENX-1; MGC9169; KMT6
Homo sapiens	RefSeq	NM_152998.1	ILMN_20896	EZH2	NM_152998.1	NM_152998.1		2146	23510383	NM_152998.1	EZH2	NP_694543.1	ILMN_1708105	0001710368	A	2260	CGGCATCGAAAGAGAAATGGAAATCCCTTGACATCTGCTACCTCCTCCCC	7	-	148504718-148504737:148504738-148504767	7q36.1a	Homo sapiens enhancer of zeste homolog 2 (Drosophila) (EZH2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [pmid 15385962] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8921387] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8954776] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17560333] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	EZH1; ENX-1; MGC9169; KMT6	EZH1; ENX-1; MGC9169; KMT6
Homo sapiens	RefSeq	NM_024719.1	ILMN_24814	GRTP1	NM_024719.1	NM_024719.1		79774	13376022	NM_024719.1	GRTP1	NP_078995.1	ILMN_1745068	0003830044	S	1130	GCAGCATGGCAAACGTGGGCGGTATTTCAGCAGCTGGGCCTTCATCAAAG	13	-	113027458-113027507	13q34d	Homo sapiens growth hormone regulated TBC protein 1 (GRTP1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	TBC1D6; MGC138328; MGC138330; FLJ22474	TBC1D6; MGC138328; MGC138330; FLJ22474
Homo sapiens	RefSeq	NM_001093730.1	ILMN_346296	DYTN	NM_001093730.1	NM_001093730.1		391475	157364925	NM_001093730.1	DYTN	NP_001087199.1	ILMN_3244704	0002850148	S	1779	GTACAGTGGAGCTCAGCGAGTGTGCAGGGCCTTCTCTGCCCTTGTTGATC	2	-	207516567-207516616	2q33.3b	Homo sapiens dystrotelin (DYTN), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_004063.2	ILMN_182715	CDH17	NM_004063.2	NM_004063.2		1015	16507959	NM_004063.2	CDH17	NP_004054.2	ILMN_1814015	0007050673	S	3517	CCAGTCAGCTGGCCAGATTTCCTCACTACCTGCCATGCATACATGCTGCG	8	-	95208696-95208745	8q22.1b	Homo sapiens cadherin 17, LI cadherin (liver-intestine) (CDH17), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8153632] [evidence NAS]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8153632] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8153632] [evidence TAS]; Catalysis of the transfer of a oligopeptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement [goid 5427] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HPT1; CDH16; FLJ26931; MGC142024; HPT-1; MGC138218	HPT1; CDH16; FLJ26931; MGC142024; HPT-1; MGC138218
Homo sapiens	RefSeq	XR_039501.1	ILMN_342275	LOC100134537	XR_039501.1	XR_039501.1		100134537	169170611	XR_039501.1	LOC100134537		ILMN_3241469	0002360082	S	163	GGCTGGGCAGCCATGGCGTCCTATATCGATGAACACGACTGTGAGCCGTT	7	+	104531195-104531244		PREDICTED: Homo sapiens misc_RNA (LOC100134537), miscRNA.					
Homo sapiens	RefSeq	NM_198268.1	ILMN_174496	HIPK1	NM_198268.1	NM_198268.1		204851	38201639	NM_198268.1	HIPK1	NP_938009.1	ILMN_2412768	0005360092	A	3220	AGTCATCTGGATGCTGTATCACCCCCACAGGGTATCGAGCTCAACGCGGG	1	+	114316014-114316063	1p13.2b	Homo sapiens homeodomain interacting protein kinase 1 (HIPK1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12702766] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12529400] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC33446; KIAA0630; Nbak2; MGC26642; MGC33548; Myak	MGC33446; KIAA0630; Nbak2; MGC26642; MGC33548; Myak
Homo sapiens	RefSeq	XR_037539.1	ILMN_339747	LOC100132977	XR_037539.1	XR_037539.1		100132977	169210902	XR_037539.1	LOC100132977		ILMN_3239416	0003890280	S	180	ACGCTTGCTGGCTGTGGGTGAAGTAGCCCCATATTCTGTGTCCGTCTTCC	17	-	20400106-20400124:20403052-20403082	17p11.2c	PREDICTED: Homo sapiens misc_RNA (LOC100132977), miscRNA.					
Homo sapiens	RefSeq	NM_004718.2	ILMN_8404	COX7A2L	NM_004718.2	NM_004718.2		9167	18105036	NM_004718.2	COX7A2L	NP_004709.2	ILMN_3237665	0006180246	S	735	GGGGTGCAGGAGCCTTTCTGGATTTGGATGTGGCTATGGAAAGAACACAG	2	-	42577974-42578023	2p21f	Homo sapiens cytochrome c oxidase subunit VIIa polypeptide 2 like (COX7A2L), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [pmid 9418891] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]	EB1; COX7RP; COX7AR; SIG81	EB1; COX7AR; SIG81; COX7RP
Homo sapiens	RefSeq	NM_015197.1	ILMN_22761	PACS2	NM_015197.1	NM_015197.1		23241	59709422	NM_015197.1	PACS2	NP_056012.1	ILMN_1719864	0005550025	S	3114	TCCTCGCACGTGAAGCACTTCCCCATCTGCATCTTCGGACACTCCAAGGC	14	+	104931994-104932043	14q32.33c	Homo sapiens phosphofurin acidic cluster sorting protein 2 (PACS2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		KIAA0602; PACS1L	KIAA0602; PACS1L
Homo sapiens	RefSeq	NM_178547.2	ILMN_29576	ZBTB8OS	NM_178547.2	NM_178547.2		339487	31341729	NM_178547.2	ZBTB8OS	NP_848642.1	ILMN_1660868	0007040630	S	1	CCGGGCCGAAGTCCGGTGGATGAAGGGCGGAAGTAGAGTGTCTAATCCTG	1	-	33116135-33116166:33116167-33116184	1p35.1b	Homo sapiens zinc finger and BTB domain containing 8 opposite strand (ZBTB8OS), mRNA.				MGC62007; ARCH2; ARCH	MGC62007; ARCH2; ARCH
Homo sapiens	RefSeq	NM_178547.2	ILMN_29576	ZBTB8OS	NM_178547.2	NM_178547.2		339487	31341729	NM_178547.2	ZBTB8OS	NP_848642.1	ILMN_2057399	0001500364	S	425	CGATCAATTGGGTGGGGAGAAGAATTTTCATTGTCCAAGCACCCTCAGGG	1	-	33087547-33087549:33093109-33093145:33097428-33097437	1p35.1b	Homo sapiens zinc finger and BTB domain containing 8 opposite strand (ZBTB8OS), mRNA.				MGC62007; ARCH2; ARCH	MGC62007; ARCH2; ARCH
Homo sapiens	RefSeq	NM_002449.3	ILMN_29711	MSX2	NM_002449.4	NM_002449.4		4488	84452153	NM_002449.4	MSX2	NP_002440.2	ILMN_1766951	0005960243	S	1758	AGGTACATTCATCCTCACAGATTGCAAAGGTGATTTGGGTGGGGGTTTAG	5	+	174090058-174090107	5q35.2b	Homo sapiens msh homeobox 2 (MSX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8968743] [evidence TAS]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12145306] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 9073066] [evidence IDA]	FPP; PFM1; CRS2; MSH; PFM; HOX8	FPP; PFM1; CRS2; MSH; HOX8; PFM
Homo sapiens	RefSeq	NM_153461.1	ILMN_14485	IL17RC	NM_153461.1	NM_153461.1		84818	24430196	NM_153461.1	IL17RC	NP_703191.1	ILMN_1666226	0006290333	I	473	AAGGGGCAAGAGCTGGGTCTGTCTTTCTCTGGGAGGGTCTGGGAATACGG	3	+	9934254-9934303	3p25.3c	Homo sapiens interleukin 17 receptor C (IL17RC), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IL17-RL; IL17RL; MGC10763	IL17-RL; IL17RL; MGC10763
Homo sapiens	RefSeq	NM_032732.2	ILMN_14485	IL17RC	NM_153461.1	NM_153461.1		84818	24430196	NM_153461.1	IL17RC	NP_703191.1	ILMN_1798790	0003450228	A	2367	CTTTTCCGCACCGTGCCCGTCTTCACACTGCCCTCCCAACTGCCAGACTT	3	+	9950050-9950099	3p25.3c	Homo sapiens interleukin 17 receptor C (IL17RC), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IL17-RL; IL17RL; MGC10763	IL17-RL; MGC10763
Homo sapiens	RefSeq	NM_014389.1	ILMN_15422	PELP1	NM_014389.1	NM_014389.1		27043	24415382	NM_014389.1	PELP1	NP_055204.1	ILMN_1728684	0003310041	S	3264	GGAGACAGAGACAGAGGCCGAAGCTCTCCAGGAAAAGGAGCAGGATGACA	17	-	4521562-4521575:4521735-4521770	17p13.2c	Homo sapiens proline, glutamic acid and leucine rich protein 1 (PELP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		P160; HMX3; MNAR	P160; HMX3; MNAR
Homo sapiens	RefSeq	NM_152512.3	ILMN_12200	ENTHD1	NM_152512.3	NM_152512.3		150350	34222283	NM_152512.3	ENTHD1	NP_689725.2	ILMN_1811736	0004180575	S	2471	GCCTCTGAGGTGACCTAGGAGGATTGAGTTTGGGGGTATACATTTCACAC	22	-	40139238-40139287	22q13.1d	Homo sapiens ENTH domain containing 1 (ENTHD1), mRNA.				dJ370M22.3; FLJ25421	dJ370M22.3; FLJ25421
Homo sapiens	RefSeq	NM_020726.2	ILMN_19048	NLN	NM_020726.3	NM_020726.3		57486	141802119	NM_020726.3	NLN	NP_065777.1	ILMN_1742089	0000430209	S	2706	AGGTGTGACCTCTCCTTTGCCTGCATACCTCAAGGCCAGGGGAATATGCC	5	+	65109053-65109102	5q12.3b	Homo sapiens neurolysin (metallopeptidase M3 family) (NLN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1226; DKFZp564F123; AGTBP	KIAA1226; DKFZp564F123; AGTBP
Homo sapiens	RefSeq	NM_006635.2	ILMN_11760	ZNF460	NM_006635.3	NM_006635.3		10794	143771698	NM_006635.3	ZNF460	NP_006626.3	ILMN_1676237	0006620037	S	2584	GTGAAAGCCTGCTTTGTTCCACAGCATTGTCTCCACTCTTGAGGAGCAGA	19	+	57804171-57804220	19q13.43b	Homo sapiens zinc finger protein 460 (ZNF460), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HZF8; ZNF272	HZF8; ZNF272
Homo sapiens	RefSeq	NM_203451.2	ILMN_6331	C13ORF36	NM_203451.2	NM_203451.2		400120	155969690	NM_203451.2	C13orf36	NP_982276.2	ILMN_3246728	0001170402	S	2462	CGTCCCCAAACACCATAAGACCAGCACAGAGTTGCTGCCCTAAAATGTAT	13	+	36169231-36169280	13q13.3b	Homo sapiens chromosome 13 open reading frame 36 (C13orf36), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC33996	MGC33996
Homo sapiens	RefSeq	NM_020132.4	ILMN_15513	AGPAT3	NM_020132.4	NM_020132.4		56894	83267875	NM_020132.4	AGPAT3	NP_064517.1	ILMN_2288175	0002120204	I	124	GGAAGCCCTGAGGGCAGCTGTTCCCACTGGCTCTGCTGACCTTGTGCCTT	21	+	44148278-44148327	21q22.3c-q22.3d	Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 3 (AGPAT3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16780588] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16620771] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16780588] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [pmid 15367102] [evidence NAS]	Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [pmid 15367102] [evidence NAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol [goid 46027] [pmid 16620771] [evidence EXP]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC4604; LPAAT-GAMMA1	MGC4604; LPAAT-GAMMA1
Homo sapiens	RefSeq	NM_001014448.1	ILMN_14519	CPZ	NM_001014448.1	NM_001014448.1		8532	62388878	NM_001014448.1	CPZ	NP_001014448.1	ILMN_1759448	0004730474	I	342	GAAGCTCTGATTCCTGCACAGTAGCTGTTGTCCTGGTCCTCCCCTGCCAG	4	+	8601307-8601309:8602684-8602730	4p16.1c	Homo sapiens carboxypeptidase Z (CPZ), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9099699] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 9099699] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC99682	MGC99682
Homo sapiens	RefSeq	XR_042090.1	ILMN_339255	LOC728666	XR_042090.1	XR_042090.1		728666	169169798	XR_042090.1	LOC728666		ILMN_3223317	0001110487	A	149	TGCTCCGGCCGGGACGATGGTGAAGTATTTCCTGGGCCAGAGCATGCTCC				6q22.32c	PREDICTED: Homo sapiens misc_RNA (LOC728666), miscRNA.					
Homo sapiens	RefSeq	XR_016390.1	ILMN_169976	LOC442113	XR_016390.1	XR_016390.1		442113	113415655	XR_016390.1	LOC442113		ILMN_3284994	0002690767	M	718	TCGGAGAGAACAGTCTGACAATACCACTTTCGGACCTGGGCGGACCACGG	4	-	83720794-83720843	4q21.22a	PREDICTED: Homo sapiens misc_RNA (LOC442113), miscRNA.					
Homo sapiens	RefSeq	XR_016390.1	ILMN_169976	LOC442113	XR_016390.1	XR_016390.1		442113	113415655	XR_016390.1	LOC442113		ILMN_3208487	0003440706	A	778	AACCCCGGGGGTGTGCTGGACCTCCTGGAGAAGGTGCACCATAAGCAGGA	4	-	83720734-83720783	4q21.22a	PREDICTED: Homo sapiens misc_RNA (LOC442113), miscRNA.					
Homo sapiens	RefSeq	NR_003263.2	ILMN_365932	SDHAP3	NR_003263.2	NR_003263.2		728609	195539376	NR_003263.2	SDHAP3		ILMN_3307762	0001400524	S	509	GGGTCACCGGAGCGACAGAAAACTTGGAACTAAGCTGGAGGACACCGAGT	5	-	1585118-1585167		Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3 (SDHAP3), non-coding RNA.					
Homo sapiens	RefSeq	XM_001720665.1	ILMN_346259	LOC729387	XM_001720665.1	XM_001720665.1		729387	169172864	XM_001720665.1	LOC729387	XP_001720717.1	ILMN_3244666	0000290102	S	259	TGATCTGGATAATCAAGATAACGACCCTCAACAGCGGCGGAGAGGGAGCA	8	-	7646229-7646278	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC729387 (LOC729387), mRNA.					
Homo sapiens	RefSeq	NM_019072.2	ILMN_20375	SGTB	NM_019072.2	NM_019072.2		54557	95147358	NM_019072.2	SGTB	NP_061945.1	ILMN_2109343	0004050066	S	3702	TTCTCAGACCTGCAAACACCTAAGCACCTGGGCCAAACAAAGCTACAACG	5	-	64999806-64999855	5q12.3b	Homo sapiens small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta (SGTB), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	SGT2; FLJ39002	SGT2; FLJ39002
Homo sapiens	Unigene	Hs.556018	ILMN_112453	HS.556018	Hs.556018		Hs.556018		31873719	BX537762			ILMN_1898682	0006350093	S	3096	ACAGCAGTTTCACACCAGAATAGCAGTGCCCTTTCTTTTTGTACATACTG	6	-	79702450-79702499		Homo sapiens mRNA; cDNA DKFZp779F0411 (from clone DKFZp779F0411)					
Homo sapiens	RefSeq	NM_014793.3	ILMN_183463	LCMT2	NM_014793.3	NM_014793.3		9836	32455233	NM_014793.3	LCMT2	NP_055608.2	ILMN_1667577	0005310332	S	2457	GCTGAAGACAGTGGCCATGCAGTCCGAGAGGAGTAGTGGTCTGCCTCTAA	15	-	43620385-43620434	15q15.3a	Homo sapiens leucine carboxyl methyltransferase 2 (LCMT2), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12853982] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TYW4; PPM2; KIAA0547; MGC9534	TYW4; PPM2; KIAA0547; MGC9534
Homo sapiens	RefSeq	XR_018553.2	ILMN_175877	LOC648294	XR_018553.2	XR_018553.2		648294	169179682	XR_018553.2	LOC648294		ILMN_3208056	0002810626	A	132	AAAAAGAAGATCCGCACATCACCCACCTTCCGGCGGTCCAAGACCCTGCG				9p24.1b	PREDICTED: Homo sapiens misc_RNA (LOC648294), miscRNA.					
Homo sapiens	RefSeq	XR_018553.2	ILMN_175877	LOC648294	XR_018553.2	XR_018553.2		648294	169179682	XR_018553.2	LOC648294		ILMN_3284570	0006550022	M	2	GGCCCCCAACTTTTTCACAAGATGGCGCCGAAAGCGAAGAAGGAAGCTCC				9p24.1b	PREDICTED: Homo sapiens misc_RNA (LOC648294), miscRNA.					
Homo sapiens	RefSeq	NM_207411.2	ILMN_175223	XKR5	NM_207411.3	NM_207411.3		389610	118722352	NM_207411.3	XKR5	NP_997294.2	ILMN_1799097	0005220091	S	4623	GGCCCTGTGGACCAACATCGGCTTCTCAGATGGCTTCCTCACTTCATGCC	8	-	6666959-6667008	8p23.1f	Homo sapiens XK, Kell blood group complex subunit-related family, member 5 (XKR5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			XRG5a; XRG5b; UNQ2754	XRG5a; XRG5b; UNQ2754
Homo sapiens	RefSeq	NM_001011546.1	ILMN_14931	DSTN	NM_001011546.1	NM_001011546.1		11034	58530847	NM_001011546.1	DSTN	NP_001011546.1	ILMN_1794294	0004590470	I	334	GAGAATGGAGTTTAGAAGAAGGTCAGAGCCCTGGGCAGTGTTGGGCCAGG	20	+	17520652-17520701	20p12.1a	Homo sapiens destrin (actin depolymerizing factor) (DSTN), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IEA]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 8399167] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of actin depolymerization [goid 30836] [evidence IEA]; The process by which an actin filament is broken down into smaller filaments [goid 51014] [pmid 8399167] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	ACTDP; bA462D18.2; ADF	ACTDP; bA462D18.2; ADF
Homo sapiens	RefSeq	NM_006870.3	ILMN_14931	DSTN	NM_001011546.1	NM_001011546.1		11034	58530847	NM_001011546.1	DSTN	NP_001011546.1	ILMN_1706426	0006900612	A	1453	TCAGGCACATCATTGGAATACAGGAAGTAGCCCTGCACCTGCCAGTGAGC	20	+	17536359-17536408	20p12.1a	Homo sapiens destrin (actin depolymerizing factor) (DSTN), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The portion of the actin cytoskeleton, comprising filamentous actin and associated proteins, that lies just beneath the plasma membrane [goid 30864] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [evidence IEA]; Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament [goid 8154] [pmid 8399167] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of actin depolymerization [goid 30836] [evidence IEA]; The process by which an actin filament is broken down into smaller filaments [goid 51014] [pmid 8399167] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	ACTDP; bA462D18.2; ADF	ACTDP; bA462D18.2; ADF
Homo sapiens	RefSeq	NM_005333.2	ILMN_172286	HCCS	NM_005333.2	NM_005333.2		3052	62751774	NM_005333.2	HCCS	NP_005324.2	ILMN_2128923	0003440544	S	2141	TCCTGAATGCTGTAGTGTTAAATTAGTGGATGAAATTGGCAGTCTGTGGG	X	+	11050956-11051005	Xp22.2	Homo sapiens holocytochrome c synthase (cytochrome c heme-lyase) (HCCS), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11827457] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 8661044] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 8661044] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 8661044] [evidence TAS]	Catalysis of the reaction: holocytochrome c = apocytochrome c + heme [goid 4408] [pmid 8661044] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MCOPS7; DKFZp779I1858; CCHL	MCOPS7; DKFZp779I1858; CCHL
Homo sapiens	RefSeq	XM_001726411.1	ILMN_345324	LOC730385	XM_001726411.1	XM_001726411.1		730385	169170264	XM_001726411.1	LOC730385	XP_001726463.1	ILMN_3243943	0001980068	S	181	CTTGGTCGGCCCACAGCTTCCTGAAGCCAAGCTCCCCGGGCCCAGCTCAG	7	-	56887847-56887896		PREDICTED: Homo sapiens hypothetical LOC730385 (LOC730385), mRNA.					
Homo sapiens	RefSeq	XM_934555.1	ILMN_7093	CCR2	NM_000648.2	NM_000648.2		1231	110224460	NM_000648.2	CCR2	NP_000639.1	ILMN_1669062	0005960239	I	2306	GAATGATGAGTTCCTTCACCAGGAGCAAAGGACGGGGATCGTGTGGAACC					Homo sapiens chemokine (C-C motif) receptor 2 (CCR2), transcript variant B, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8995400] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15995708] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15995708] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8146186] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10623817] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10623817] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10751368] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10201901] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 8995400] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9548499] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9670957] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15995708] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Interacting selectively with a CCR2 chemokine receptor [goid 31727] [pmid 15995708] [evidence IDA]	CKR2A; MCP-1-R; CCR2B; CC-CKR-2; CMKBR2; CCR2A; CD192; CKR2; CKR2B	
Homo sapiens	RefSeq	XM_930277.1	ILMN_7093	CCR2	NM_000648.2	NM_000648.2		1231	110224460	NM_000648.2	CCR2	NP_000639.1	ILMN_1777461	0002900524	A	257	CAGTTGCTGAGAAGCCTGACATACCAGGACTGCCTGAGACAAGCCACAAG					Homo sapiens chemokine (C-C motif) receptor 2 (CCR2), transcript variant B, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8995400] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15995708] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15995708] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8146186] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10623817] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10623817] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10751368] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10201901] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 8995400] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9548499] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9670957] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15995708] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Interacting selectively with a CCR2 chemokine receptor [goid 31727] [pmid 15995708] [evidence IDA]	CKR2A; MCP-1-R; CCR2B; CC-CKR-2; CMKBR2; CCR2A; CD192; CKR2; CKR2B	
Homo sapiens	RefSeq	NM_000648.1	ILMN_7093	CCR2	NM_000648.2	NM_000648.2		1231	110224460	NM_000648.2	CCR2	NP_000639.1	ILMN_1658299	0005390367	A	551	TCCTCATCTTAATAAACTGCAAAAAGCTGAAGTGCTTGACTGACATTTAC					Homo sapiens chemokine (C-C motif) receptor 2 (CCR2), transcript variant B, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8995400] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15995708] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15995708] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8146186] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10623817] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10623817] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10751368] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10201901] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 8995400] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9548499] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9670957] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15995708] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Interacting selectively with a CCR2 chemokine receptor [goid 31727] [pmid 15995708] [evidence IDA]	CKR2A; MCP-1-R; CCR2B; CC-CKR-2; CMKBR2; CCR2A; CD192; CKR2; CKR2B	CC-CKR-2; CCR2A; CKR2; CKR2A; MCP-1-R; CCR2B; CMKBR2; CD192; CKR2B
Homo sapiens	RefSeq	NM_032307.2	ILMN_16168	C9ORF64	NM_032307.3	NM_032307.3		84267	110815801	NM_032307.3	C9orf64	NP_115683.3	ILMN_1777318	0004920215	S	1970	GCCACAGTCACGCCACTGCATTCTATCCTGGGCAACAGATGGAGACCTTG	9	-	86553680-86553729	9q21.32c	Homo sapiens chromosome 9 open reading frame 64 (C9orf64), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC10999; RP11-575L7.5	MGC10999; RP11-575L7.5
Homo sapiens	RefSeq	NM_022041.2	ILMN_25306	GAN	NM_022041.2	NM_022041.2		8139	21614518	NM_022041.2	GAN	NP_071324.1	ILMN_1708103	0006400673	S	4598	GATAAGGCACTTTTACCAGGTGTGTGTTGGAATTGGTGGCTCAGGATAGG	16	+	79971362-79971411	16q23.2b	Homo sapiens gigaxonin (GAN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A type of intermediate filament found in the core of neuronal axons. Neurofilaments are heteropolymers composed of three type IV polypeptides: NF-L, NF-M, and NF-H (for low, middle, and high molecular weight). Neurofilaments are responsible for the radial growth of an axon and determine axonal diameter [goid 5883] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16303566] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16227972] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12147674] [evidence IPI]	KLHL16; FLJ38059; GAN1	KLHL16; FLJ38059; GAN1
Homo sapiens	RefSeq	NM_031200.1	ILMN_16242	CCR9	NM_031200.1	NM_031200.1		10803	14043041	NM_031200.1	CCR9	NP_112477.1	ILMN_1664316	0005220661	A	2199	TACAGTGAGCAGATATGGGCAGCAGCCAGGTAGGGCAAAGGGGTGAAGCG	3	+	45919326-45919375	3p21.31j-p21.31i	Homo sapiens chemokine (C-C motif) receptor 9 (CCR9), transcript variant A, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10229797] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10229797] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10640743] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10229797] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10544196] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10544196] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10229797] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	GPR28; GPR-9-6; CDw199	GPR-9-6; CDw199; GPR28
Homo sapiens	RefSeq	NM_031200.1	ILMN_16242	CCR9	NM_031200.1	NM_031200.1		10803	14043041	NM_031200.1	CCR9	NP_112477.1	ILMN_2337386	0005360484	A	1728	CCCTGCTCTTGAGCCTGATAACCCATGCCAGGTCTTATAGATTCCTGATC	3	+	45918855-45918904	3p21.31j-p21.31i	Homo sapiens chemokine (C-C motif) receptor 9 (CCR9), transcript variant A, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10229797] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10229797] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10640743] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10229797] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10544196] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10544196] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10229797] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	GPR28; GPR-9-6; CDw199	GPR-9-6; CDw199; GPR28
Homo sapiens	RefSeq	NM_000998.3	ILMN_137134	RPL37A	NM_000998.3	NM_000998.3		6168	53759149	NM_000998.3	RPL37A	NP_000989.1	ILMN_1808757	0004180110	S	1021	CCAGGAGATTGAGACCAGTGTGGCCAACATAGCAAAAACCCGTCTCGACG	2	+	217075083-217075132	2q35c	Homo sapiens ribosomal protein L37a (RPL37A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC74786	MGC74786
Homo sapiens	RefSeq	NM_006664.2	ILMN_2797	CCL27	NM_006664.2	NM_006664.2		10850	22165428	NM_006664.2	CCL27	NP_006655.1	ILMN_2113606	0006380056	S	240	GACTGTCACCTCCAGGCTTTCGTGCTTCACCTGGCTCAACGCAGCATCTG	9	-	34662049-34662076:34662281-34662302	9p13.3c	Homo sapiens chemokine (C-C motif) ligand 27 (CCL27), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10588729] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10588729] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10588729] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10588729] [evidence TAS]	SCYA27; ILC; CTAK; PESKY; ESKINE; ALP; CTACK	SCYA27; ILC; PESKY; CTACK; CTAK; ESKINE; ALP
Homo sapiens	RefSeq	XM_001719387.1	ILMN_353192	LOC100128908	XM_001719387.1	XM_001719387.1		100128908	169207210	XM_001719387.1	LOC100128908	XP_001719439.1	ILMN_3274006	0004210576	M	2289	GGCCTTCAGTTGCTACACTGCACAAGGCCCTGACTCTGACTCTCCAGAAA				14q11.2f	PREDICTED: Homo sapiens hypothetical protein LOC100128908 (LOC100128908), mRNA.					
Homo sapiens	RefSeq	NM_030593.1	ILMN_17601	SIRT2	NM_030593.1	NM_030593.1		22933	13775601	NM_030593.1	SIRT2	NP_085096.1	ILMN_2398711	0004890066	A	1271	GCCAAGGACGAGGCCAGGACAACAGAGAGGGAGAAACCCCAGTGACAGCT	19	-	44061629-44061634:44061635-44061678	19q13.2a	Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 2 (S. cerevisiae) (SIRT2), transcript variant 2, mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [pmid 12697818] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12697818] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 12620231] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISS]	Repression of transcription of ribosomal DNA by the formation of heterochromatin [goid 183] [pmid 11427894] [evidence NAS]; Repression of transcription of telomeric DNA by the formation of heterochromatin [goid 6348] [pmid 11427894] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 10381378] [evidence NAS];  [goid 6980] [pmid 12887892] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [pmid 12697818] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12887892] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; The modification of histones by removal of acetyl groups [goid 16575] [pmid 12697818] [evidence TAS]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [pmid 12697818] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12887892] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence ISS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12887892] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15126506] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 21320922] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [pmid 12697818] [evidence IDA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence ISS]; Interacting selectively with the enzyme histone acetyltransferase [goid 35035] [pmid 12887892] [evidence IPI]; Interacting selectively with the enzyme histone acetyltransferase [goid 35035] [evidence ISS]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 12620231] [evidence IPI]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence ISS]; Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate [goid 42903] [pmid 12620231] [evidence IDA]; Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate [goid 42903] [evidence ISS]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [evidence ISS]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [pmid 12697818] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	SIR2L2; SIR2L; SIR2	SIR2L2; SIR2L; SIR2
Homo sapiens	RefSeq	XM_939320.1	ILMN_182870	LRRC26	NM_001013653.2	NM_001013653.2		389816	149363643	NM_001013653.2	LRRC26	NP_001013675.1	ILMN_1680757	0007150270	A	1128	AAGCTTCCCCCATGCCTTTGCCCTCCCTTTACACTGTCTGCCGGCGTCAA	9	-	140063229-140063278	9q34.3e	Homo sapiens leucine rich repeat containing 26 (LRRC26), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	bA350O14.10	
Homo sapiens	RefSeq	XM_001725021.1	ILMN_334754	DKFZP667F0711	XM_001725021.1	XM_001725021.1		399716	169201930	XM_001725021.1	DKFZp667F0711	XP_001725073.1	ILMN_3252862	0005570128	M	271	ACAGTATCTTGCCCTGACCCGACTCCAAGTACTGATCCCCAAGGAAGGCA				10p15.1a	PREDICTED: Homo sapiens hypothetical protein DKFZp667F0711 (DKFZp667F0711), mRNA.					
Homo sapiens	RefSeq	NM_032096.1	ILMN_3682	PCDHGB2	NM_032096.1	NM_032096.1		56103	14270492	NM_032096.1	PCDHGB2	NP_115267.1	ILMN_2391959	0002340376	A	2149	CTCTCTTCCAGGTCAGATGCTTGGGACTGTTTTCAGCCTGGTCTCAGCTC	5	+	140722035-140722084	5q31.3c	Homo sapiens protocadherin gamma subfamily B, 2 (PCDHGB2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-B2; MGC126854	PCDH-GAMMA-B2; MGC126854
Homo sapiens	RefSeq	NM_178539.3	ILMN_180412	FAM19A2	NM_178539.3	NM_178539.3		338811	52486623	NM_178539.3	FAM19A2	NP_848634.1	ILMN_2172318	0007400379	S	3408	CACTGACGTGGTCAGTTAGACATACGTTGGTTTCCAGGATAGAGGCCCAT	12	-	62102638-62102687	12q14.1d	Homo sapiens family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 (FAM19A2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			DKFZp781P0552; TAFA-2; MGC42403; DKFZp761E1217; TAFA2	DKFZp781P0552; TAFA-2; MGC42403; DKFZp761E1217; TAFA2
Homo sapiens	RefSeq	NM_178539.3	ILMN_180412	FAM19A2	NM_178539.3	NM_178539.3		338811	52486623	NM_178539.3	FAM19A2	NP_848634.1	ILMN_1691876	0003520114	S	2271	GCTGTATCCCAAGTGCACTGTCCTTCTGTCCTGGATGTGTTCCTGGGTCC	12	-	62103775-62103824	12q14.1d	Homo sapiens family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 (FAM19A2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			DKFZp781P0552; TAFA-2; MGC42403; DKFZp761E1217; TAFA2	DKFZp781P0552; TAFA-2; MGC42403; DKFZp761E1217; TAFA2
Homo sapiens	RefSeq	XM_942362.1	ILMN_38955	LOC652734	XM_942362.1	XM_942362.1		652734	89064024	XM_942362.1	LOC652734	XP_947455.1	ILMN_1730549	0004220647	S	848	CTGAGCCTGACCCACTGACTTGGCTGAGTGGGGAGACTGGAGGGTCGCAT					PREDICTED: Homo sapiens similar to CG33096-PB, isoform B (LOC652734), mRNA.					
Homo sapiens	RefSeq	XM_941035.1	ILMN_33875	LOC388327	XM_941035.1	XM_941035.1		388327	89042271	XM_941035.1	LOC388327	XP_946128.1	ILMN_1799031	0000020390	I	1074	CTCACCAAAAGTCACTGGCCAAGCCCTCCTCTGGCCTTCTAGGCCGTACT				17p13.2a	PREDICTED: Homo sapiens hypothetical LOC388327, transcript variant 2 (LOC388327), mRNA.					
Homo sapiens	RefSeq	NM_183058.2	ILMN_27254	LYZL2	NM_183058.2	NM_183058.2		119180	73088986	NM_183058.2	LYZL2	NP_898881.2	ILMN_2163482	0005260202	S	567	CCGACTGGAAAAAAGACTGTGAGGTTTCCTAAACTGGAACTGGACCCAGG	10	-	30940871-30940889:30940890-30940920	10p11.23a	Homo sapiens lysozyme-like 2 (LYZL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Catalysis of the hydrolysis of the 1,4-beta-linkages between N-acetyl-D-glucosamine and N-acetylmuramic acid in peptidoglycan heteropolymers of the prokaryotes cell walls and between N-acetyl-D-glucosamine residues in chitodextrins [goid 3796] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]		
Homo sapiens	RefSeq	NM_014388.5	ILMN_165918	C1ORF107	NM_014388.5	NM_014388.5		27042	75677334	NM_014388.5	C1orf107	NP_055203.4	ILMN_1746677	0003060452	S	5374	GATGGTCCTAGTGGAGATGGGGAATGTGTCCCTGCTGACTCCTCATACCC	1	+	208094442-208094491	1q32.2b	Homo sapiens chromosome 1 open reading frame 107 (C1orf107), mRNA.				FLJ41680; MGC29875; DEF; DKFZp686E19106; FLJ12704; DJ434O14.5	FLJ41680; MGC29875; DEF; DKFZp686E19106; FLJ12704; DJ434O14.5
Homo sapiens	RefSeq	NM_014388.5	ILMN_165918	C1ORF107	NM_014388.5	NM_014388.5		27042	75677334	NM_014388.5	C1orf107	NP_055203.4	ILMN_2089656	0001300092	S	8008	GCCTCCAGCTTCTGCTTGAATTCCTTCAAGGATGGGGTGCTCATTGTGGC	1	+	208097076-208097125	1q32.2b	Homo sapiens chromosome 1 open reading frame 107 (C1orf107), mRNA.				FLJ41680; MGC29875; DEF; DKFZp686E19106; FLJ12704; DJ434O14.5	FLJ41680; MGC29875; DEF; DKFZp686E19106; FLJ12704; DJ434O14.5
Homo sapiens	RefSeq	NM_016093.2	ILMN_7806	RPL26L1	NM_016093.2	NM_016093.2		51121	17017971	NM_016093.2	RPL26L1	NP_057177.1	ILMN_1776586	0001780095	S	1	GCGCACTCAGGGTCTGAGGCAGCTAGTAGCCGGAGGGTCACCATGAAGTT	5	+	172319045-172319077:172319474-172319482:172319483-172319490	5q35.2a	Homo sapiens ribosomal protein L26-like 1 (RPL26L1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	RPL26P1; FLJ46904	RPL26P1; FLJ46904
Homo sapiens	RefSeq	NM_016093.2	ILMN_7806	RPL26L1	NM_016093.2	NM_016093.2		51121	17017971	NM_016093.2	RPL26L1	NP_057177.1	ILMN_2110532	0006130390	S	278	TCATCTACATCGAGCGGGTGCAGCGTGAGAAGGCCAACGGCACAACTGTC	5	+	172328135-172328184	5q35.2a	Homo sapiens ribosomal protein L26-like 1 (RPL26L1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	RPL26P1; FLJ46904	RPL26P1; FLJ46904
Homo sapiens	RefSeq	NM_001010892.1	ILMN_181261	RSHL3	NM_001010892.1	NM_001010892.1		345895	58219005	NM_001010892.1	RSHL3	NP_001010892.1	ILMN_2068698	0004850241	S	2192	GGAGCAGGCTTTCAGGGCTGCACAAGAAGCAGTTCTACTCGCAGCTGAGA	6	+	117060201-117060250	6q22.1d	Homo sapiens radial spokehead-like 3 (RSHL3), mRNA.				MGC126303; FLJ37974; dJ412I7.1	MGC126303; FLJ37974; dJ412I7.1
Homo sapiens	RefSeq	XM_932230.1	ILMN_43312	LOC644532	XM_932230.1	XM_932230.1		644532	89042046	XM_932230.1	LOC644532	XP_937323.1	ILMN_1667444	0004230543	S	2192	TAGGCCCTGAACTTTCTCCAGCCAAGCTCTGAGGGCCCACCTCCTGCCTC	17	+	130178-130227		PREDICTED: Homo sapiens hypothetical protein LOC644532 (LOC644532), mRNA.					
Homo sapiens	RefSeq	NM_080645.1	ILMN_12229	COL12A1	NM_080645.2	NM_080645.2		1303	93141048	NM_080645.2	COL12A1	NP_542376.2	ILMN_1733756	0003060095	A	7470	GAGAGAACATGCCGTGTGCCTTTAGTTAGCACAGCGGGCAGCCTCAGTGA	6	-	75852960-75852982:75851748-75851774	6q13c-q14.1a	Homo sapiens collagen, type XII, alpha 1 (COL12A1), transcript variant short, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A collagen homotrimer of alpha1(XII) chains; type XII collagen triple helices may link sheet-forming or fibrillar collagens to other structures [goid 5595] [pmid 1427837] [evidence NAS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 3476925] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [pmid 1427837] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; A constituent of the extracellular matrix that enables the matrix to resist longitudinal stress [goid 30020] [pmid 1427837] [evidence NAS]	BA209D8.1; DJ234P15.1; COL12A1L	BA209D8.1; DJ234P15.1; COL12A1L
Homo sapiens	RefSeq	NM_004799.2	ILMN_183636	ZFYVE9	NM_004799.2	NM_004799.2		9372	47717105	NM_004799.2	ZFYVE9	NP_004790.2	ILMN_1799622	0006100451	I	2452	TCAAGCCTGGGAGAACATGATGAGTGCCTCAAGCCAGAGCCCTAACCCTA	1	+	52504916-52504965	1p32.3d	Homo sapiens zinc finger, FYVE domain containing 9 (ZFYVE9), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 12809483] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9865696] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11100470] [evidence EXP]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 12809483] [evidence NAS]; The aggregation, arrangement and bonding together of a ligand-bound type II transforming growth factor beta (TGF-beta) receptor dimer with a type I TGF-beta receptor dimer, following ligand binding, to form a heterotetrameric TGF-beta receptor complex [goid 7181] [pmid 9865696] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins [goid 7183] [pmid 9865696] [evidence TAS];  [goid 7184] [pmid 9865696] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12809483] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9865696] [evidence EXP]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [pmid 9582421] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SMADIP; MADHIP; NSP; SARA	MADHIP; NSP; SMADIP; SARA
Homo sapiens	RefSeq	XM_941615.1	ILMN_46715	LOC652224	XM_941615.1	XM_941615.1		652224	89034652	XM_941615.1	LOC652224	XP_946708.1	ILMN_1651477	0001240170	S	27	GCTGTCCAGATCTTGTCCTGATCATCCCAAAGGACTCTGTGCTGATGGTG					PREDICTED: Homo sapiens similar to zinc finger, CCHC domain containing 9 (LOC652224), mRNA.					
Homo sapiens	RefSeq	NM_152255.1	ILMN_13260	PSMA7	NM_152255.1	NM_152255.1		5688	23110947	NM_152255.1	PSMA7	NP_689468.1	ILMN_1701962	0005050279	I	477	CGCTTGCATGCTCACCTCTGGCAGCAGGGCAGTCACGGCTCCGCCATGGA	20	-	60148168-60148217	20q13.33c	Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 7 (PSMA7), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15225636] [evidence IPI]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC3755; HSPC; C6; XAPC7; RC6-1	MGC3755; HSPC; C6; XAPC7; RC6-1
Homo sapiens	Unigene	Hs.563518	ILMN_116359	HS.563518	Hs.563518		Hs.563518		23670382	BU736534			ILMN_1822408	0007560142	S	516	GAAATCAGGGAACAGAGGGGACGTGAAGTGGCCCAGAGAGCATCGTTCCG	8	+	142467897-142467946		UI-E-CK1-afj-d-21-0-UI.s2 UI-E-CK1 Homo sapiens cDNA clone UI-E-CK1-afj-d-21-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003852.3	ILMN_26118	TRIM24	NM_003852.3	NM_003852.3		8805	47419908	NM_003852.3	TRIM24	NP_003843.3	ILMN_2405031	0003800097	A	2555	TGTTGGAGAGACAAGGAAAGAGGATGACCCCAATGAGGACTGGTGTGCAG	7	+	137914674-137914723	7q34a	Homo sapiens tripartite motif-containing 24 (TRIM24), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9115274] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9115274] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9115274] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively, in a ligand dependent manner, with a nuclear receptor protein [goid 16922] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PTC6; TIF1ALPHA; RNF82; TIF1A; TF1A; hTIF1; TIF1	PTC6; RNF82; TIF1A; hTIF1; TIF1; TIF1ALPHA; TF1A
Homo sapiens	RefSeq	NM_006393.1	ILMN_22942	NEBL	NM_006393.1	NM_006393.1		10529	5453757	NM_006393.1	NEBL	NP_006384.1	ILMN_1808824	0000380561	I	7724	GAATTGCTGAGCATTTAGGAAGCAGCACCAAGTCTATTACAGGCATGGTG	10	-	21110350-21110399	10p12.31c-p12.31b	Homo sapiens nebulette (NEBL), transcript variant 1, mRNA.		Any process that controls the length of actin filaments in a cell [goid 30832] [pmid 9733644] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 9733644] [evidence TAS]	MGC119747; bA56H7.1; MGC119746; LNEBL	bA56H7.1; MGC119746; LNEBL; MGC119747
Homo sapiens	RefSeq	NM_031903.1	ILMN_25120	MRPL32	NM_031903.1	NM_031903.1		64983	13994260	NM_031903.1	MRPL32	NP_114109.1	ILMN_1749432	0004480327	S	556	GGGCAAGAGGATCATTGAACGAGACAGAAAGCGACCATCCTGGTTCACCC	7	+	42943642-42943691	7p14.1a	Homo sapiens mitochondrial ribosomal protein L32 (MRPL32), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence ISS]; A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes [goid 5761] [pmid 11543634] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11543634] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11543634] [evidence NAS]; Any substance involved in the initiation, activation, perpetuation, repression or termination of polypeptide synthesis at the ribosome [goid 45182] [pmid 11543634] [evidence NAS]	bMRP-59b; HSPC283; L32mt; MRP-L32	HSPC283; MRP-L32; bMRP-59b; L32mt
Homo sapiens	RefSeq	XR_040321.1	ILMN_351107	FAM74A4	XR_040321.1	XR_040321.1		401508	169177284	XR_040321.1	FAM74A4		ILMN_3248190	0004220204	S	132	GTTGGGCAACAAAAGCAGGGTAGGGCTCCAGCTAAGCCACGTAGGCACTA	9	-	65234025-65234074	9q12f	PREDICTED: Homo sapiens misc_RNA (FAM74A4), miscRNA.					
Homo sapiens	RefSeq	NM_144987.1	ILMN_8757	U2AF1L4	NM_144987.2	NM_144987.2		199746	94536806	NM_144987.2	U2AF1L4	NP_659424.2	ILMN_1779177	0004050059	S	604	CTTCACTCTCCTGCCCCATCCTTCCCAGGCTCCCGGGCTCCATAATGTAA	19	-	40925338-40925338:40925339-40925387	19q13.12a	Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 4 (U2AF1L4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	U2AF1L3; U2af26; U2AF1-RS3; U2AF1L3V1; FLJ35525; MGC33901; U2AF1RS3	U2AF1-RS3; U2AF1L3V1; FLJ35525; MGC33901; U2AF1RS3
Homo sapiens	RefSeq	NM_144987.2	ILMN_8757	U2AF1L4	NM_144987.2	NM_144987.2		199746	94536806	NM_144987.2	U2AF1L4	NP_659424.2	ILMN_2386269	0005570546	A	446	AGGTCACCCCCGAGGTTCCATACTGGCCACCATCCCCGAGAGAGGAACCA	19	-	40925496-40925544:40926550-40926550	19q13.12a	Homo sapiens U2 small nuclear RNA auxiliary factor 1-like 4 (U2AF1L4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	U2AF1L3; U2af26; U2AF1-RS3; U2AF1L3V1; FLJ35525; MGC33901; U2AF1RS3	U2AF1-RS3; U2AF1L3V1; FLJ35525; MGC33901; U2AF1RS3
Homo sapiens	RefSeq	NM_015398.1	ILMN_182780	DKFZP564J102	NM_015398.1	NM_015398.1		25854	54792130	NM_015398.1	DKFZP564J102	NP_056213.1	ILMN_2390544	0006200176	A	1413	CGCACAGACTGGGACGGGCCTCAGACACTCATGGATTATCACCTTCTGCA	4	+	187321628-187321677	4q35.2a	Homo sapiens DKFZP564J102 protein (DKFZP564J102), transcript variant 1, mRNA.				MSTP119; MST119	MSTP119; MST119
Homo sapiens	RefSeq	XM_001714795.1	ILMN_338301	LOC730045	XM_001714795.1	XM_001714795.1		730045	169212807	XM_001714795.1	LOC730045	XP_001714847.1	ILMN_3299326	0003390014	M	287	CCATTTTGCAAGTGTCAGGACCAGCTACAGCGCGGTGGGCGCAAACATCC	18	-	30058655-30058704	18q12.1g	PREDICTED: Homo sapiens hypothetical LOC730045 (LOC730045), mRNA.					
Homo sapiens	RefSeq	XM_001718395.1	ILMN_335515	LOC100131091	XM_001718395.1	XM_001718395.1		100131091	169211905	XM_001718395.1	LOC100131091	XP_001718447.1	ILMN_3276203	0006980681	M	212	GCGCAGACACGAGTGCCCCCGACTTGAGCCGAACCTCTAGCCGATGCCGG				17q22c	PREDICTED: Homo sapiens hypothetical LOC100131091 (LOC100131091), mRNA.					
Homo sapiens	RefSeq	XM_001718395.1	ILMN_335515	LOC100131091	XM_001718395.1	XM_001718395.1		100131091	169211905	XM_001718395.1	LOC100131091	XP_001718447.1	ILMN_3199736	0001410053	A	391	GTCCTACCAGCCCAACACGGACCTGAGCCGCGACCACGCGGGCTGCAGCC				17q22c	PREDICTED: Homo sapiens hypothetical LOC100131091 (LOC100131091), mRNA.					
Homo sapiens	RefSeq	XM_925891.1	ILMN_31273	LOC642362	XM_925891.1	XM_925891.1		642362	89034189	XM_925891.1	LOC642362	XP_930984.1	ILMN_2200799	0001430440	S	128	TGCACATGCCCCAGCCTGTGAATCCAGAGTTCCCTACAGGGCCCATCACA	11	-	89141035-89141084	11q14.3b	PREDICTED: Homo sapiens similar to tripartite motif protein 39 (LOC642362), mRNA.					
Homo sapiens	RefSeq	XM_936256.1	ILMN_31273	LOC642362	XM_925891.1	XM_925891.1		642362	89034189	XM_925891.1	LOC642362	XP_930984.1	ILMN_1765686	0001710139	S	102	CTCACAGATGAGTGAGTCCGTGCTGCTGCACATGCCCCAGCCTGTGAATC	11	-	89141061-89141102:89142509-89142516	11q14.3b	PREDICTED: Homo sapiens similar to tripartite motif protein 39 (LOC642362), mRNA.					
Homo sapiens	RefSeq	XM_926089.1	ILMN_31273	LOC642362	XM_925891.1	XM_925891.1		642362	89034189	XM_925891.1	LOC642362	XP_930984.1	ILMN_1661853	0002510608	S	218	CCTTCACTTGGGAAGGAACCAATTACAATATCGGGCTGTTTGAGGATGTG	11	-	89139830-89139879	11q14.3b	PREDICTED: Homo sapiens similar to tripartite motif protein 39 (LOC642362), mRNA.					
Homo sapiens	RefSeq	XM_943332.1	ILMN_33858	LOC648460	XM_943332.1	XM_943332.1		648460	89030558	XM_943332.1	LOC648460	XP_948425.1	ILMN_1654870	0004900681	S	1	ATGGCCAGGAAACGAACGCGCCCGGGCCACCTGAACAAGGGCCCGGCAGG					PREDICTED: Homo sapiens hypothetical protein LOC648460 (LOC648460), mRNA.					
Homo sapiens	RefSeq	XM_001713786.1	ILMN_351139	LOC100128404	XM_001713786.1	XM_001713786.1		100128404	169214531	XM_001713786.1	LOC100128404	XP_001713838.1	ILMN_3248207	0002690465	S	345	TTTCCACAGCTCAGTTCTCTAAAAAACTTCCATCTCCCACCAAAAGTCAT	20	+	51924788-51924837	20q13.2c	PREDICTED: Homo sapiens hypothetical protein LOC100128404 (LOC100128404), mRNA.					
Homo sapiens	RefSeq	XM_926986.1	ILMN_38583	LOC653342	XM_926986.1	XM_926986.1		653342	89035391	XM_926986.1	LOC653342	XP_932079.1	ILMN_1768753	0006960286	S	248	CTACCTGCAAGCAAGGCTACCAGCTCATAGAGGTAAGAGCCCAGGGCTGA					PREDICTED: Homo sapiens similar to Complement C1r subcomponent precursor (Complement component 1, r subcomponent) (LOC653342), mRNA.					
Homo sapiens	RefSeq	NM_015540.2	ILMN_22842	RPAP1	NM_015540.2	NM_015540.2		26015	24430138	NM_015540.2	RPAP1	NP_056355.2	ILMN_1713605	0001450678	S	4370	GGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGC	15	-	41809626-41809675	15q15.1c	Homo sapiens RNA polymerase II associated protein 1 (RPAP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	DKFZP727M111; MGC858; FLJ12732; KIAA1403	DKFZP727M111; MGC858; FLJ12732; KIAA1403
Homo sapiens	RefSeq	NR_026878.1	ILMN_387398	MGC12982	NR_026878.1	NR_026878.1		84793	223718696	NR_026878.1	MGC12982		ILMN_3309468	0004810114	S	2361	ACAGCCAACCTGCTTCCTGCCTGCTCTTCTCCAAAAAGACTGTGAATCCA	1	-	47897903-47897952		Homo sapiens hypothetical protein MGC12982 (MGC12982), non-coding RNA.					
Homo sapiens	Unigene	Hs.428001	ILMN_90756	HS.428001	Hs.428001		Hs.428001		24718088	CA388667			ILMN_1843591	0002570632	S	90	GCCAGGATTTGAACCCAGGCAATTGGATGCCAGATTCCATGCTCTTAACC	3	+	63250947-63250996		cs01f05.y1 Human Retinal pigment epithelium/choroid cDNA (Un-normalized, unamplified): cs Homo sapiens cDNA clone cs01f05 5, mRNA sequence					
Homo sapiens	RefSeq	NM_177424.1	ILMN_18776	STX12	NM_177424.2	NM_177424.2		23673	153791677	NM_177424.2	STX12	NP_803173.1	ILMN_1773901	0006380743	S	2743	GTTGGGGTGGCACAGTGGCCCAAAGAGCAGCTTCAGAGATAATTCCTTGG	1	+	28023214-28023263	1p35.3b	Homo sapiens syntaxin 12 (STX12), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 15469992] [evidence IDA]; A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis [goid 45335] [pmid 15469992] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [pmid 15469992] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 15469992] [evidence IDA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	STX14; MGC51957; STX13	MGC51957; STX13; STX14
Homo sapiens	RefSeq	XM_928240.1	ILMN_166772	LOC729137	XM_001129423.1	XM_001129423.1		729137	113429694	XM_001129423.1	LOC729137	XP_001129423.1	ILMN_1722397	0006380068	A	690	ATGGAGACACTACCACCACCCCTGCTCTCCTACTGCATACCCCACCATGC	X	-	3782512-3782561	Xp22.33a	PREDICTED: Homo sapiens hypothetical protein LOC729137 (LOC729137), mRNA.					
Homo sapiens	RefSeq	NR_002584.1	ILMN_7553	SNORA69	NR_002584.1	NR_002584.1		26779	77993287	NR_002584.1	SNORA69		ILMN_3244883	0004280369	S	35	GAAGTACTGCCATTATCCTGCTGAAAGAAAAGCCGTGTTAATCATTTTTG	X	-	118921363-118921412	Xq24c	Homo sapiens small nucleolar RNA, H/ACA box 69 (SNORA69), small nucleolar RNA.				RNU69; U69; U69A	RNU69; U69; U69A
Homo sapiens	RefSeq	NM_001485.2	ILMN_164205	GBX2	NM_001485.2	NM_001485.2		2637	45593143	NM_001485.2	GBX2	NP_001476.2	ILMN_1680320	0002450491	S	1028	CGTCAGCAGGTTCGCTATCAGAAGTCAGCATCAGCAGCTAGAACAGGCCC	2	-	237074564-237074613	2q37.2b	Homo sapiens gastrulation brain homeobox 2 (GBX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The characteristic movement of cells from the dorsal ridge of the neural tube to a variety of locations in a vertebrate embryo [goid 1755] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IEA]; The process by which the anatomical structure of the midbrain-hindbrain boundary is generated and organized. Morphogenesis pertains to the creation of form. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate [goid 21555] [evidence IEA]; The process whose specific outcome is the progression of rhombomere 2 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order [goid 21568] [evidence IEA]; The multiplication or reproduction of neuroblasts that will give rise to granule cells. A granule cell is a glutamatergic interneuron found in the cerebellar cortex [goid 21930] [evidence IEA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IEA]; The process by which the anatomical structures of a tube are generated and organized. Morphogenesis pertains to the creation of form. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system [goid 35239] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whose specific outcome is the progression of the autonomic nervous system over time, from its formation to the mature structure. The autonomic nervous system is composed of neurons that are not under conscious control, and is comprised of two antagonistic components, the sympathetic and parasympathetic nervous systems. The autonomic nervous system regulates key functions including the activity of the cardiac (heart) muscle, smooth muscles (e.g. of the gut), and glands [goid 48483] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9346236] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_006644.2	ILMN_1157	HSPH1	NM_006644.2	NM_006644.2		10808	42544158	NM_006644.2	HSPH1	NP_006635.2	ILMN_1712888	0000160598	S	3325	CCTGCCAAGGTAGTTTTCTTGCATTTTGCTCTCCATTCAGCATGTGTGTG	13	-	31711055-31711104	13q12.3d	Homo sapiens heat shock 105kDa/110kDa protein 1 (HSPH1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9931472] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 9931472] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The process of assisting in the correct noncovalent assembly of posttranslational proteins and is dependent on additional protein cofactors. This process occurs over one or several cycles of nucleotide hydrolysis-dependent binding and release [goid 51085] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	HSP105B; DKFZp686M05240; HSP105; HSP105A; NY-CO-25; KIAA0201	HSP105B; DKFZp686M05240; HSP105; HSP105A; NY-CO-25; KIAA0201
Homo sapiens	RefSeq	XR_038257.1	ILMN_340777	LOC100128269	XR_038257.1	XR_038257.1		100128269	169172048	XR_038257.1	LOC100128269		ILMN_3259829	0006900598	M	287	TGTTCAGATTTTGCTTAAACTGTGGAGCAATGGTTTCAGTTTAGATGATG				7q36.3c	PREDICTED: Homo sapiens misc_RNA (LOC100128269), miscRNA.					
Homo sapiens	RefSeq	NR_002935.1	ILMN_39358	FABP5L3	NR_002935.1	NR_002935.1		220832	89941461	NR_002935.1	FABP5L3		ILMN_2217574	0002600386	S	736	GGAGCGTGTCATGAACCATGTCGCCTGTACTCGGATCTATGAAAAAGCAC	7	+	151770914-151770963	7q36.1e	Homo sapiens fatty acid binding protein 5-like 3 (pseudogene) (FABP5L3), non-coding RNA.		The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]		
Homo sapiens	RefSeq	XM_937707.1	ILMN_46865	LOC648639	XM_937707.1	XM_937707.1		648639	89059128	XM_937707.1	LOC648639	XP_942800.1	ILMN_1764301	0004560398	S	4688	AGCGTTTCCTCTGTAAACAGGAACAAGACGAGGATGCCCGTTCTCACCAC					PREDICTED: Homo sapiens hypothetical protein LOC648639 (LOC648639), mRNA.					
Homo sapiens	RefSeq	NM_138729.2	ILMN_24639	ST7L	NM_138729.2	NM_138729.2		54879	38201636	NM_138729.2	ST7L	NP_620057.1	ILMN_1659926	0003610164	I	1976	CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATG	1	-	113084481-113084530	1p13.2c	Homo sapiens suppression of tumorigenicity 7 like (ST7L), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ11657; FLJ20284; STLR; ST7R	FLJ11657; FLJ20284; STLR; ST7R
Homo sapiens	RefSeq	NM_138729.2	ILMN_24639	ST7L	NM_138729.2	NM_138729.2		54879	38201636	NM_138729.2	ST7L	NP_620057.1	ILMN_2410114	0003140767	A	1462	CAGCCTCCAGAAGAGGATTAAGCACAGCAGAAATTAATGCCGTGGAAGCA	1	-	113119646-113119695	1p13.2c	Homo sapiens suppression of tumorigenicity 7 like (ST7L), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ11657; FLJ20284; STLR; ST7R	FLJ11657; FLJ20284; STLR; ST7R
Homo sapiens	RefSeq	NM_138729.2	ILMN_24639	ST7L	NM_138729.2	NM_138729.2		54879	38201636	NM_138729.2	ST7L	NP_620057.1	ILMN_2410113	0001430279	A	1581	CCTCCAGAACACATTCTGAAACGGGGTGATAGTGAAGCAATTGCCTATGC	1	-	113098560-113098609	1p13.2c	Homo sapiens suppression of tumorigenicity 7 like (ST7L), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ11657; FLJ20284; STLR; ST7R	FLJ11657; FLJ20284; STLR; ST7R
Homo sapiens	RefSeq	NM_015251.2	ILMN_162053	ATMIN	NM_015251.2	NM_015251.2		23300	54792091	NM_015251.2	ATMIN	NP_056066.2	ILMN_2223720	0006620600	S	4657	ATGAGCATGTAATAATACAAGAACTGTTTCCCCCTCAAAACCTGAACCTG	16	+	79638243-79638292	16q23.2b	Homo sapiens ATM interactor (ATMIN), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ76795; ZNF822; DKFZp779K1455; KIAA0431; ASCIZ	FLJ76795; ZNF822; DKFZp779K1455; KIAA0431; ASCIZ
Homo sapiens	RefSeq	NM_018983.2	ILMN_14204	GAR1	NM_018983.3	NM_018983.3		54433	77812667	NM_018983.3	GAR1	NP_061856.1	ILMN_1708954	0000130326	I	98	GCGCTAAAGGCTGTTTTGGAACCAGTGTTGCTTGTTCCGCGGGTGATTGG	4	+	110736763-110736812	4q25c	Homo sapiens GAR1 ribonucleoprotein homolog (yeast) (GAR1), transcript variant 1, mRNA.				GAR1	GAR1
Homo sapiens	RefSeq	NM_018983.3	ILMN_14204	GAR1	NM_018983.3	NM_018983.3		54433	77812667	NM_018983.3	GAR1	NP_061856.1	ILMN_3263329	0001010544	M	962	GTGAAACAGTTGACAGACATCACCAGTTGACTTCTGCATTAACCTGCATG	4	+	110745588-110745637	4q25c	Homo sapiens GAR1 ribonucleoprotein homolog (yeast) (GAR1), transcript variant 1, mRNA.				GAR1	GAR1
Homo sapiens	RefSeq	NM_001426.2	ILMN_171977	EN1	NM_001426.3	NM_001426.3		2019	126090908	NM_001426.3	EN1	NP_001417.3	ILMN_1709593	0005820025	S	2623	CCACCGCCTCGCTGCCCCCGCCCAGTTTCGTTTTCGTTGCCTTTTTCATT	2	-	119600036-119600085	2q14.2b	Homo sapiens engrailed homeobox 1 (EN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IEA]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IEA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IEA]; The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages [goid 30917] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8684466] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8094370] [evidence TAS]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IEA]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IEA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IEA]; The process whose specific outcome is the progression of the midbrain-hindbrain boundary over time, from its formation to the mature structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages [goid 30917] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	XM_940675.1	ILMN_165890	LOC390933	XR_019076.1	XR_019076.1		390933	113428623	XR_019076.1	LOC390933		ILMN_1717770	0006370709	S	1851	AAGAGGGAAACAGCCTGGACAAGAGAGGCCTAGTGATGACCGCTTTGTAC				19q13.2b	PREDICTED: Homo sapiens misc_RNA (LOC390933), miscRNA.					
Homo sapiens	RefSeq	XM_940681.1	ILMN_165890	LOC390933	XR_019076.1	XR_019076.1		390933	113428623	XR_019076.1	LOC390933		ILMN_1682350	0004860360	S	291	GGAAGCACATGAGTGCCTGGCTGAATTGGAAGAAAAGCTACCAGTGGCAG				19q13.2b	PREDICTED: Homo sapiens misc_RNA (LOC390933), miscRNA.					
Homo sapiens	RefSeq	NM_021806.1	ILMN_22720	FAM3A	NM_021806.1	NM_021806.1		60343	13324681	NM_021806.1	FAM3A	NP_068578.1	ILMN_1808356	0003440091	S	1511	CCCGGGGTGGTGAAGTAGCTGGAGCCCGATCACAGTCCCGCGGTTTGTCA	X	-	153734551-153734600	Xq28g	Homo sapiens family with sequence similarity 3, member A (FAM3A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	2-19; DXS560S; XAP-7; 2.19	2-19; DXS560S; XAP-7; 2.19
Homo sapiens	RefSeq	NM_032829.1	ILMN_22158	C12ORF34	NM_032829.1	NM_032829.1		84915	14249533	NM_032829.1	C12orf34	NP_116218.1	ILMN_1772446	0003850400	S	2482	CTGTCCCACACGATCAAGGCAGGGAAAGATAGGCAGGAGTCCCCTCACGA	12	+	108692433-108692482	12q24.11b	Homo sapiens chromosome 12 open reading frame 34 (C12orf34), mRNA.				FLJ14721	FLJ14721
Homo sapiens	RefSeq	NM_133430.1	ILMN_306853	XAGE1B	NM_001097595.1	NM_001097595.1		653220	148225603	NM_001097595.1	XAGE1B	NP_001091064.1	ILMN_1691494	0005220753	A	541	TGCGCGACATGGAAGGTGATCTGCAAGAGCTGCATCAGTCAAACACCGGG	X	+	52241127-52241176	Xp11.22b	Homo sapiens X antigen family, member 1B (XAGE1B), transcript variant 1, mRNA.					XAGE-1; GAGED2
Homo sapiens	RefSeq	XM_927237.1	ILMN_306853	XAGE1B	NM_001097595.1	NM_001097595.1		653220	148225603	NM_001097595.1	XAGE1B	NP_001091064.1	ILMN_1672582	0006330753	I	319	CCGAGTCCCAGAAGCACCTGGAACCCCGACAGAAGATTCTGGACTCCCCA	X	+	52239292-52239341	Xp11.22b	Homo sapiens X antigen family, member 1B (XAGE1B), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_002232.2	ILMN_32813	KCNA3	NM_002232.3	NM_002232.3		3738	88758564	NM_002232.3	KCNA3	NP_002223.3	ILMN_1702604	0000770053	S	2757	CTTCGGCAGTATCACAAGAAGATTAAAGTGGCAGACACCCCTTCCAGCGG	1	-	111214849-111214898	1p13.3a	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, member 3 (KCNA3), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 1373731] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 1373731] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [pmid 1373731] [evidence TAS];  [goid 5251] [pmid 1986382] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	HLK3; HPCN3; MK3; HUKIII; HGK5; PCN3; KV1.3	MGC41884; HLK3; HGK5; KV1.3; HPCN3; MK3; HUKIII; PCN3
Homo sapiens	RefSeq	NM_004776.2	ILMN_5773	B4GALT5	NM_004776.2	NM_004776.2		9334	13929470	NM_004776.2	B4GALT5	NP_004767.1	ILMN_1685824	0002060047	S	4331	CCTCTTGTCAGAGATCCTCTACCACAGACATTAATAGCTGAGCAGGAGCC	20	-	47683153-47683202	20q13.13d	Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 (B4GALT5), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 9597550] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	beta4Gal-T5; BETA4-GALT-IV; B4Gal-T5; gt-V; beta4GalT-V	beta4Gal-T5; BETA4-GALT-IV; B4Gal-T5; gt-V; beta4GalT-V
Homo sapiens	RefSeq	NM_014614.1	ILMN_164803	PSME4	NM_014614.1	NM_014614.1		23198	40788002	NM_014614.1	PSME4	NP_055429.1	ILMN_1763540	0000020671	S	5963	AAAGAGGGCAAGTCCTGAACCTAACCAATGACCTGATGGATTGCTCGACC	2	-	53945667-53945716	2p16.2a	Homo sapiens proteasome (prosome, macropain) activator subunit 4 (PSME4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ21864; MGC142228; MGC138374; PA200; KIAA0077	MGC138374; PA200; KIAA0077
Homo sapiens	RefSeq	XM_290482.5	ILMN_17686	FAM21C	NM_015262.1	NM_015262.1		253725	59814410	NM_015262.1	FAM21C	NP_056077.1	ILMN_1670189	0004780243	I	1031	CCTTACCCTCAGGAGAAGCAAAACCTCGGAAGACACTCAAAGAGAAGAAG	10	+	45566936-45566985	10q11.21d	Homo sapiens family with sequence similarity 21, member C (FAM21C), mRNA.				KIAA0592; FAM21A	
Homo sapiens	RefSeq	XM_941782.1	ILMN_17686	FAM21C	NM_015262.1	NM_015262.1		253725	59814410	NM_015262.1	FAM21C	NP_056077.1	ILMN_1672753	0002750450	A	1256	AAGCTGGAGCCTCTGTTAAGGAGGAGTCTTCATCATCCAAACCTGGAAAG	10	+	45568668-45568691:45569940-45569965	10q11.21d	Homo sapiens family with sequence similarity 21, member C (FAM21C), mRNA.				KIAA0592; FAM21A	
Homo sapiens	RefSeq	NM_015262.1	ILMN_17686	FAM21C	NM_015262.1	NM_015262.1		253725	59814410	NM_015262.1	FAM21C	NP_056077.1	ILMN_1727249	0001410678	S	2893	GAAACACCTCAGGCAAATTTAGCGATCAACCCAGCGGCCTTGCTGCCCAC	10	+	45601074-45601085:45602489-45602526	10q11.21d	Homo sapiens family with sequence similarity 21, member C (FAM21C), mRNA.				KIAA0592; FAM21A	FAM21A; KIAA0592
Homo sapiens	RefSeq	NM_001005751.1	ILMN_17686	FAM21C	NM_015262.1	NM_015262.1		253725	59814410	NM_015262.1	FAM21C	NP_056077.1	ILMN_1691201	0007040180	I	385	GAGAATCGTGTATATGATGAAGAAGTGGAGGAGCCAGTACTCAAGGCTGA	10	+	45544475-45544480:45553437-45553480	10q11.21d	Homo sapiens family with sequence similarity 21, member C (FAM21C), mRNA.				KIAA0592; FAM21A	FAM21A; bA56A21.1
Homo sapiens	RefSeq	NR_002575.1	ILMN_15033	SNORA27	NR_002575.1	NR_002575.1		619499	77735355	NR_002575.1	SNORA27		ILMN_3248811	0006420647	S	14	CTTTGCCAGTTGGACTTATGTCTTTATTGGTCATTCAAGTGGGGCAAAGG	13	+	26727551-26727600	13q12.2a	Homo sapiens small nucleolar RNA, H/ACA box 27 (SNORA27), small nucleolar RNA.				ACA27	ACA27
Homo sapiens	RefSeq	XM_210365.1	ILMN_42273	LOC284288	XM_939247.1	XM_939247.1		284288	89047473	XM_939247.1	LOC284288	XP_944340.1	ILMN_1725650	0004730463	A	387	AAGCATCCATCTTACCCAAGCCCGTCTTGCAGGCAAAGGGAAGGAGTTGG				18q21.31b	PREDICTED: Homo sapiens similar to ribosomal protein L24-like (LOC284288), mRNA.					
Homo sapiens	RefSeq	XM_926677.1	ILMN_38357	LOC643344	XM_926677.1	XM_926677.1		643344	89058159	XM_926677.1	LOC643344	XP_931770.1	ILMN_1653991	0006400746	S	75	GCAGGAACTGGTGCTGCGCACGGTGCTCCTGGGCCAGTGTGAGTTCCAAG	21	+	22892003-22892052		PREDICTED: Homo sapiens hypothetical protein LOC643344 (LOC643344), mRNA.					
Homo sapiens	RefSeq	NM_015653.2	ILMN_29387	RIBC2	NM_015653.2	NM_015653.2		26150	55953113	NM_015653.2	RIBC2	NP_056468.1	ILMN_1680349	0003420750	S	1004	GTGGTCCCTGACCGCTGGAAGGGCATGACCCAGGAGCAGCTGGAGCAGAT	22	+	44200633-44200682	22q13.31c	Homo sapiens RIB43A domain with coiled-coils 2 (RIBC2), mRNA.				C22orf11	C22orf11
Homo sapiens	RefSeq	NM_001008572.1	ILMN_996	TTLL1	NM_012263.3	NM_012263.3		25809	56699469	NM_012263.3	TTLL1	NP_036395.1	ILMN_1806415	0001050521	A	1376	TCTGTATGATGAAGAATTGGCCCAGGGTGACGGGGCTGACCGGGAGCTGA	22	-	41765808-41765855:41772360-41772361	22q13.2c	Homo sapiens tubulin tyrosine ligase-like family, member 1 (TTLL1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	C22orf7; HS323M22B	C22orf7; HS323M22B
Homo sapiens	RefSeq	NM_012263.3	ILMN_996	TTLL1	NM_012263.3	NM_012263.3		25809	56699469	NM_012263.3	TTLL1	NP_036395.1	ILMN_2372795	0005290600	A	998	CATCCATGGGGGCAAGTGGACAGTGAGTAACCTGCGGCTCTACCTGGAGA	22	-	41785413-41785462	22q13.2c	Homo sapiens tubulin tyrosine ligase-like family, member 1 (TTLL1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	C22orf7; HS323M22B	C22orf7; HS323M22B
Homo sapiens	RefSeq	XM_927843.1	ILMN_35707	LOC653514	XM_927843.1	XM_927843.1		653514	89031595	XM_927843.1	LOC653514	XP_932936.1	ILMN_1685970	0006180674	S	622	CAGGTGACCCACCAGCGTGCAGTAGACACCATCCGTCGGGCTTATCGAAA	10	-	102758505-102758554		PREDICTED: Homo sapiens similar to PDZ domain containing 7 (LOC653514), mRNA.					
Homo sapiens	RefSeq	XR_037050.1	ILMN_334670	LOC100132004	XR_037050.1	XR_037050.1		100132004	169177414	XR_037050.1	LOC100132004		ILMN_3235446	0001070468	S	208	GCTCTGTCTAGCAGGTGGCTGCAGCCATGGAGAGGCTCTCTGCCGCCGCT	9	-	66460869-66460918	9q12g	PREDICTED: Homo sapiens misc_RNA (LOC100132004), miscRNA.					
Homo sapiens	RefSeq	XM_945238.1	ILMN_32468	LOC654042	XM_945238.1	XM_945238.1		654042	89037555	XM_945238.1	LOC654042	XP_950331.1	ILMN_1692065	0004480201	I	93	GGCATGAGCCACAGCTCCTTGCCCAGAAGGAAGTTTTTATCAACATGGGT					PREDICTED: Homo sapiens similar to dehydrogenase/reductase (SDR family) member 4 like 2, transcript variant 3 (LOC654042), mRNA.					
Homo sapiens	RefSeq	NM_182905.3	ILMN_29319	WASH1	NM_182905.3	NM_182905.3		375690	167466200	NM_182905.3	WASH1	NP_878908.3	ILMN_3245020	0002970148	S	1694	CTTGAGGCCACACAGCTGGGGCGGGGACTTGTCTGCCTGTACTTCATGGG				9p24.3b	Homo sapiens WAS protein family homolog 1 (WASH1), mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	FAM39E; FLJ99609; FLJ00038; FLJ75027	
Homo sapiens	RefSeq	NM_172370.2	ILMN_24597	DAOA	NM_172370.3	NM_172370.3		267012	126362974	NM_172370.3	DAOA	NP_758958.3	ILMN_1658386	0007560468	S	891	AATGCCATTTCTATGCACCCACCTGGCCTGTGTGACTGGGAGAATCTCTC	13	+	104941305-104941354	13q33.2b	Homo sapiens D-amino acid oxidase activator (DAOA), transcript variant 1, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]			SG72; LG72; G72	G72
Homo sapiens	RefSeq	NR_003140.1	ILMN_162092	SNORD117	NR_003140.1	NR_003140.1		692233	112734811	NR_003140.1	SNORD117		ILMN_3242908	0006270731	S	21	AACAGGAGCACCTCAGTGCAAGGACGACTCTTATCTATCACCCATGACTG	6	-	31612135-31612184	6p21.33a	Homo sapiens small nucleolar RNA, C/D box 117 (SNORD117), small nucleolar RNA.				U83	U83
Homo sapiens	RefSeq	NM_024702.1	ILMN_12614	ZNF750	NM_024702.2	NM_024702.2		79755	113204608	NM_024702.2	ZNF750	NP_078978.2	ILMN_1700583	0003420176	S	2519	CACACACACGCCTTCCAAGGTGGCAAGCTACAACACCTCTGAACTGGCAC	17	-	80787932-80787981	17q25.3h	Homo sapiens zinc finger protein 750 (ZNF750), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC125668; FLJ13841; Zfp750; MGC125667	MGC125668; MGC125667
Homo sapiens	RefSeq	XR_038032.1	ILMN_340227	LOC100129555	XR_038032.1	XR_038032.1		100129555	169165929	XR_038032.1	LOC100129555		ILMN_3259176	0000430021	M	497	TTCAGCCGAAGGGGTGGCGAAGCAAGAGCCCAAGAGGAGATCTGCGCACT				3q11.2a	PREDICTED: Homo sapiens misc_RNA (LOC100129555), miscRNA.					
Homo sapiens	RefSeq	XM_940647.1	ILMN_33618	LOC649160	XM_940647.1	XM_940647.1		649160	89060822	XM_940647.1	LOC649160	XP_945740.1	ILMN_1716734	0004730753	S	210	TGGGCTTGCAACGTGGATGAAGAGATGAAGAAAATTCGTCAAGTTATCCG					PREDICTED: Homo sapiens similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1) (LOC649160), mRNA.					
Homo sapiens	RefSeq	XM_001715137.1	ILMN_335756	LOC730631	XM_001715137.1	XM_001715137.1		730631	169217999	XM_001715137.1	LOC730631	XP_001715189.1	ILMN_3297965	0000050167	M	17	TTAAAAATAAAAACAGTATAACAATTACTTACATAGCATTTACACTGGAT				1q21.2a	PREDICTED: Homo sapiens hypothetical LOC730631 (LOC730631), mRNA.					
Homo sapiens	RefSeq	NM_153273.3	ILMN_1661	IP6K1	NM_153273.3	NM_153273.3		9807	58530860	NM_153273.3	IP6K1	NP_695005.1	ILMN_1700231	0006130537	A	4066	TGCTCACGCGCTCACTCCTGACCACATGCACGTTCCCTAGATGCAGACTG	3	-	49762267-49762316	3p21.31c	Homo sapiens inositol hexakisphosphate kinase 1 (IP6K1), transcript variant 1, mRNA.				PiUS; IP6K1; MGC9925	PiUS; IP6K1; MGC9925
Homo sapiens	RefSeq	NM_025231.1	ILMN_12847	ZSCAN16	NM_025231.1	NM_025231.1		80345	13376833	NM_025231.1	ZSCAN16	NP_079507.1	ILMN_1809566	0002470296	S	1000	CTTCAGTGGGCGCACAGGTCTTATTCAGCATCAGAGAATCCACACAGGTG	6	+	28097581-28097630	6p22.1b	Homo sapiens zinc finger and SCAN domain containing 16 (ZSCAN16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF392; ZNF435; FLJ22191; dJ265C24.3	ZNF392; ZNF435; FLJ22191; dJ265C24.3
Homo sapiens	RefSeq	NM_173700.1	ILMN_5137	BCORL2	NM_173700.1	NM_173700.1		286554	28316807	NM_173700.1	BCORL2	NP_775971.1	ILMN_1678260	0002570594	S	2286	TCCCAGGGATGTGGCCTTGGAGAAGGACCACTGATGAGAAGTCAAATCCC	Y	-	20077830-20077879	Yq11.222b	Homo sapiens BCL6 co-repressor-like 2 (BCORL2), mRNA.				FLJ39821	FLJ39821
Homo sapiens	RefSeq	NM_002979.3	ILMN_1160	SCP2	NM_002979.3	NM_002979.3		6342	56243511	NM_002979.3	SCP2	NP_002970.2	ILMN_1694776	0001010730	I	401	TGTGCTACTGGTTCTACTGCTTTGTTTATGGCCCGCCAGCTGATTCAGGG	1	+	53189095-53189144	1p32.3d-p32.3c	Homo sapiens sterol carrier protein 2 (SCP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 1703300] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [pmid 1703300] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA];  [goid 5498] [pmid 1703300] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15182174] [evidence IPI]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3alpha,7alpha,12alpha-trihydroxy-5beta-cholanoyl-CoA + propanoyl-CoA = CoA + 3alpha,7alpha,12alpha-trihydroxy-24-oxo-5beta-cholestanoyl-CoA [goid 33814] [evidence IEA]	SCPX; NSL-TP; DKFZp686C12188; NLTP; DKFZp686D11188	SCPX; NSL-TP; DKFZp686C12188; NLTP; DKFZp686D11188
Homo sapiens	RefSeq	XR_039415.1	ILMN_347522	LOC653753	XR_039415.1	XR_039415.1		653753	169213332	XR_039415.1	LOC653753		ILMN_3290161	0007380253	M	947	CTTTGCTTGGAAAAGATGACAAGATCCCCTAAACTGATCATAAACATGTG	19	+	58511090-58511139	19q13.41b	PREDICTED: Homo sapiens misc_RNA (LOC653753), miscRNA.					
Homo sapiens	RefSeq	XM_927022.1	ILMN_34478	LOC643734	XM_927022.1	XM_927022.1		643734	89047244	XM_927022.1	LOC643734	XP_932115.1	ILMN_1783418	0005890370	S	55	ACACCAAGTACCATTGACTGCCCAAGGGCTGAGTGCGGGCGCAGGGCGCA	18	-	67030596-67030645		PREDICTED: Homo sapiens hypothetical protein LOC643734 (LOC643734), mRNA.					
Homo sapiens	RefSeq	NM_173588.1	ILMN_170406	IGSF22	NM_173588.2	NM_173588.2		283284	148232257	NM_173588.2	IGSF22	NP_775859.2	ILMN_1759757	0000670762	S	3685	GCAGCTGCACGCTCACCGTCTATGACAAAGATGATAAGTCAGTTGTAGCA	11	-	18682635-18682661:18683940-18683962	11p15.1c	Homo sapiens immunoglobulin superfamily, member 22 (IGSF22), mRNA.				FLJ37794	FLJ37794
Homo sapiens	RefSeq	XM_925910.1	ILMN_43800	LOC642381	XM_925910.1	XM_925910.1		642381	88974831	XM_925910.1	LOC642381	XP_931003.1	ILMN_1793460	0005420273	S	224	CAAGGTGGAAGTCCATGATTCAGTCTCACTCTTACTTAGCAGCAGAAGCC	4	-	69897310-69897359	4q13.2c	PREDICTED: Homo sapiens similar to CG9924-PC, isoform C (LOC642381), mRNA.					
Homo sapiens	RefSeq	NM_205841.2	ILMN_5886	SPINK6	NM_205841.2	NM_205841.2		404203	68299792	NM_205841.2	SPINK6	NP_995313.2	ILMN_2149971	0002630240	S	351	AGTTCCAGGACCCCAAGGTCTACTGCACTCGGGAATCTAACCCACACTGT	5	+	147573679-147573728	5q33.1a	Homo sapiens serine peptidase inhibitor, Kazal type 6 (SPINK6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	MGC21394; UNQ844; BUSI2	MGC21394; UNQ844; BUSI2
Homo sapiens	RefSeq	NM_205841.2	ILMN_5886	SPINK6	NM_205841.2	NM_205841.2		404203	68299792	NM_205841.2	SPINK6	NP_995313.2	ILMN_1811479	0001980132	S	181	GGCTTTCTGGGAATTGTCTTGACAGAGAACCTCAGCTGGACAAAGCAGCC	5	+	147562777-147562826	5q33.1a	Homo sapiens serine peptidase inhibitor, Kazal type 6 (SPINK6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	MGC21394; UNQ844; BUSI2	MGC21394; UNQ844; BUSI2
Homo sapiens	RefSeq	NM_005360.3	ILMN_15072	MAF	NM_005360.3	NM_005360.3		4094	73427804	NM_005360.3	MAF	NP_005351.2	ILMN_1719543	0003610440	A	1894	GCAGCGACAACCCGTCCTCTCCCGAGTTTTTCATAACTGAGCCCACTCGC	16	-	78185938-78185951:78190183-78190218	16q23.1e	Homo sapiens v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) (MAF), transcript variant 1, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 9616139] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9616139] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	MGC71685	MGC71685
Homo sapiens	RefSeq	NM_015230.2	ILMN_178895	ARAP2	NM_015230.2	NM_015230.2		116984	21264591	NM_015230.2	ARAP2	NP_056045.2	ILMN_1767541	0006940497	I	2425	CCAACAGGAGCTGTGCAGATTGTAAAGCCCCAGATCCTGACTGGGCATCC	4	-	36166572-36166621	4p14f	Homo sapiens ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 (ARAP2), mRNA.				KIAA0580; PARX; ARAP2; FLJ44916; FLJ13675	KIAA0580; PARX; ARAP2; FLJ44916; FLJ13675
Homo sapiens	RefSeq	NM_015230.2	ILMN_178895	ARAP2	NM_015230.2	NM_015230.2		116984	21264591	NM_015230.2	ARAP2	NP_056045.2	ILMN_3244434	0003520438	S	6491	GCCAGGGGCTAGTTGGTGGTTTACTATACATTTGGGGGCTACCTGGTCAC	4	-	36068441-36068490	4p14f	Homo sapiens ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 (ARAP2), mRNA.				KIAA0580; PARX; ARAP2; FLJ44916; FLJ13675	KIAA0580; PARX; ARAP2; FLJ44916; FLJ13675
Homo sapiens	RefSeq	NM_025244.1	ILMN_16441	TSGA10	NM_025244.1	NM_025244.1		80705	13376857	NM_025244.1	TSGA10	NP_079520.1	ILMN_1680430	0005820079	I	134	TCCATTGATGGTTTGATAGTGGGCTGGGAAGGAAAGCTGTGTTCCTCCAC	2	-	99101491-99101540	2q11.2c	Homo sapiens testis specific, 10 (TSGA10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 11179690] [evidence TAS]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CEP4L	CEP4L
Homo sapiens	RefSeq	NM_025244.1	ILMN_16441	TSGA10	NM_025244.1	NM_025244.1		80705	13376857	NM_025244.1	TSGA10	NP_079520.1	ILMN_1674967	0001500025	A	2642	CACCAGAACGTGCTCACCATCGATCTCCTGACCGAGGCCTAGATCGATCA	2	-	99001103-99001152	2q11.2c	Homo sapiens testis specific, 10 (TSGA10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]; A prolongation or process extending from a nerve cell, e.g. an axon or dendrite [goid 43005] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 11179690] [evidence TAS]; Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30031] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CEP4L	CEP4L
Homo sapiens	RefSeq	NM_001003694.1	ILMN_17423	BRPF1	NM_001003694.1	NM_001003694.1		7862	51173719	NM_001003694.1	BRPF1	NP_001003694.1	ILMN_1669308	0003130138	A	4381	CTACCTGCTCATGCCAGGAGAATCCATAACTGCCTAGAGGCCTGGGGCCC	3	+	9764352-9764401	3p25.3c	Homo sapiens bromodomain and PHD finger containing, 1 (BRPF1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7906940] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BR140	BR140
Homo sapiens	RefSeq	NM_002299.2	ILMN_165828	LCT	NM_002299.2	NM_002299.2		3938	32481205	NM_002299.2	LCT	NP_002290.2	ILMN_1749026	0002680711	S	5732	GCGCTCTAAGCAAGGGAAAACACAACGAAGCCAACAGGAATTGAGCCCGG	2	-	136545907-136545956	2q21.3b	Homo sapiens lactase (LCT), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2460343] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7487100] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2460343] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: lactose + H2O = D-glucose + D-galactose [goid 16] [pmid 7487100] [evidence EXP]; Catalysis of the reaction: lactose + H2O = D-glucose + D-galactose [goid 16] [pmid 2460343] [evidence TAS]; Catalysis of the reaction: glycosyl-N-acylsphingosine + H2O = a sugar + N-acylsphingosine [goid 17042] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	LPH; LAC; LPH1	LPH; LAC; LPH1
Homo sapiens	RefSeq	NM_002299.2	ILMN_165828	LCT	NM_002299.2	NM_002299.2		3938	32481205	NM_002299.2	LCT	NP_002290.2	ILMN_2046073	0000520465	S	6023	AGTAGCTCTTGCGGAAACGTGTAGATACTGGTCTAGTGGGTCTGTGAACC	2	-	136545616-136545665	2q21.3b	Homo sapiens lactase (LCT), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2460343] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7487100] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2460343] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: lactose + H2O = D-glucose + D-galactose [goid 16] [pmid 7487100] [evidence EXP]; Catalysis of the reaction: lactose + H2O = D-glucose + D-galactose [goid 16] [pmid 2460343] [evidence TAS]; Catalysis of the reaction: glycosyl-N-acylsphingosine + H2O = a sugar + N-acylsphingosine [goid 17042] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	LPH; LAC; LPH1	LPH; LAC; LPH1
Homo sapiens	RefSeq	XM_934980.1	ILMN_30639	LOC646376	XM_934980.1	XM_934980.1		646376	88965785	XM_934980.1	LOC646376	XP_940073.1	ILMN_1721465	0004250543	S	126	GCGACTTGCCCAAACCCTACAAAAAGCACTGTGCCAGGTGCTGGATTTAT	3	-	178796158-178796183:178823109-178823132		PREDICTED: Homo sapiens hypothetical protein LOC646376 (LOC646376), mRNA.					
Homo sapiens	RefSeq	NR_001275.1	ILMN_4114	CELP	NR_001275.1	NR_001275.1		1057	27808641	NR_001275.1	CELP		ILMN_1678947	0005360730	S	4743	GTTTCTAGTGTCCCATCAGCCTTGGTCTCAAGAGGCCGAGAGGGTGCAAC	9	+	134952489-134952538	9q34.2a	Homo sapiens carboxyl ester lipase pseudogene (CELP), non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 94010938] [evidence ND ]	cell2; FLJ25862; cell1; CELL; cell3	cell2; FLJ25862; cell1; CELL; cell3
Homo sapiens	Unigene	Hs.137293	ILMN_77803	HS.137293	Hs.137293		Hs.137293		5055374	AI734261			ILMN_1884357	0003780035	S	465	AAGGCTGGAAACAAACTGGAATGTCTCTCTCCATCTGTCTGCTAAGGCGG	1	+	101480667-101480716		zb53f02.y5 Soares_fetal_lung_NbHL19W Homo sapiens cDNA clone IMAGE:307323 5, mRNA sequence					
Homo sapiens	RefSeq	NM_014619.2	ILMN_26862	GRIK4	NM_014619.2	NM_014619.2		2900	29029594	NM_014619.2	GRIK4	NP_055434.2	ILMN_1799073	0006450382	S	2821	GAGGAGAGCCTGGAGTGGGAGAAAACCACCAACAGCAGCGAGCCCGAGTA	11	+	120362129-120362178	11q23.3g-q23.3h	Homo sapiens glutamate receptor, ionotropic, kainate 4 (GRIK4), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8263508] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. Kainate receptors are multimeric assemblies of GluR5-7 and KA-1/2 subunits [goid 32983] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [pmid 8263508] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8263508] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular glutamate has been bound by the channel complex or one of its constituent parts [goid 5234] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 15277] [pmid 8263508] [evidence TAS]	GRIK; KA1; EAA1	GRIK; KA1; EAA1
Homo sapiens	RefSeq	XM_945440.1	ILMN_41441	LOC650114	XM_945440.1	XM_945440.1		650114	88999361	XM_945440.1	LOC650114	XP_950533.1	ILMN_1662294	0003990167	I	800	CAAATCCAACCAAAACAGCCTTGCTTCCGTTGGCTTTATATAATACTGCA					PREDICTED: Homo sapiens hypothetical protein LOC650113, transcript variant 1 (LOC650114), mRNA.					
Homo sapiens	RefSeq	NM_020553.2	ILMN_46740	TCL6	NM_020553.3	NM_020553.3		27004	89111117	NM_020553.3	TCL6	NP_065578.2	ILMN_1777439	0004670156	I	1304	GGGCTCCATCTACCAACCTCTGGGCAAATGCTCATCTGACTTCCATAGAC	14	+	95198593-95198642	14q32.13b	Homo sapiens T-cell leukemia/lymphoma 6 (TCL6), transcript variant TCL6c1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TCL6f1; TNG2; TNG1; TCL6e1; TCL6f2	TNG2; TNG1; TCL6e1
Homo sapiens	RefSeq	NR_002911.1	ILMN_31777	SNORA71A	NR_002911.1	NR_002911.1		26777	86604699	NR_002911.1	SNORA71A		ILMN_3245605	0004890546	S	50	AGTGCAGGGAGAGGAACGCTGAAAGAGGTTGTCCCCGTGTTTGGAGGGTC	20	-	37055987-37056036	20q11.23c	Homo sapiens small nucleolar RNA, H/ACA box 71A (SNORA71A), small nucleolar RNA.				U71a; RNU71A	U71a; RNU71A
Homo sapiens	RefSeq	NM_000487.3	ILMN_17279	ARSA	NM_000487.3	NM_000487.3		410	7262293	NM_000487.3	ARSA	NP_000478.2	ILMN_2047240	0004150168	S	1946	CTGTGGGGGAGGCTCAGGTGTCTGGAGGGGGTTTGTGCCTGATAACGTAA	22	-	49410342-49410391	22q13.33b	Homo sapiens arylsulfatase A (ARSA), mRNA.	Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes [goid 299] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 2562955] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 2562955] [evidence TAS]; Catalysis of the reaction: a cerebroside 3-sulfate + H2O = a cerebroside + SO4(2-) (sulfate) [goid 4098] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MLD	MLD
Homo sapiens	RefSeq	NM_153187.1	ILMN_7390	SLC22A1	NM_153187.1	NM_153187.1		6580	23510409	NM_153187.1	SLC22A1	NP_694857.1	ILMN_1715742	0002470356	A	1513	GGGAGTGACGCTACTTCTTCCAGAGACCAAGGGGGTCGCTTTGCCAGAGA	6	+	160497019-160497068	6q25.3f	Homo sapiens solute carrier family 22 (organic cation transporter), member 1 (SLC22A1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9187257] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9187257] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of organic cations into, out of, within or between cells. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage [goid 15695] [pmid 9187257] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [evidence IEA]; Catalysis of the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage [goid 15101] [pmid 9187257] [evidence TAS]	OCT1; HOCT1; oct1_cds	OCT1; HOCT1; oct1_cds
Homo sapiens	RefSeq	NM_004913.1	ILMN_693	C16ORF7	NM_004913.2	NM_004913.2		9605	108860689	NM_004913.2	C16orf7	NP_004904.2	ILMN_1693630	0004760433	S	2615	CTCACCTTGGCTGTGGGCTGTGAACATTCCGGGACCCTGGGCATCTTATC	16	-	89773625-89773674	16q24.3b	Homo sapiens chromosome 16 open reading frame 7 (C16orf7), mRNA.		The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [pmid 10231027] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10231027] [evidence TAS]	ATP-BL	ATP-BL
Homo sapiens	RefSeq	NM_001007122.2	ILMN_27257	FSD2	NM_001007122.2	NM_001007122.2		123722	148540132	NM_001007122.2	FSD2	NP_001007123.1	ILMN_3307738	0005340008	S	2036	CTGGGAGGTGGAGGTGGATGAGCATTTGGACTACAGAGTTGGTGTGGCCT	15	-	83430932-83430981	15q25.2a-q25.2b	Homo sapiens fibronectin type III and SPRY domain containing 2 (FSD2), mRNA.				RP11-127F21; SPRYD1	RP11-127F21; SPRYD1
Homo sapiens	RefSeq	NM_024083.2	ILMN_9446	ASPSCR1	NM_024083.2	NM_024083.2		79058	17572803	NM_024083.2	ASPSCR1	NP_076988.1	ILMN_1660749	0006940484	I	1797	GGACCACCTCCTCTGCCAGCAGGAATAAAGACTTGTGCATCCCTCAAAAA	17	+	77568525-77568571:79935426-79935428	17q25.3g	Homo sapiens alveolar soft part sarcoma chromosome region, candidate 1 (ASPSCR1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ASPS; ASPCR1; TUG; ASPL; UBXD9; RCC17	ASPS; ASPCR1; TUG; ASPL; UBXD9; RCC17
Homo sapiens	RefSeq	NM_021064.3	ILMN_13095	HIST1H2AG	NM_021064.3	NM_021064.3		8969	38570130	NM_021064.3	HIST1H2AG	NP_066408.1	ILMN_1686478	0006580187	S	1396	GGTATTGGGCGTTCCTGACACAAACTGAGGCCTCCTAGCAAGACTGGCAG	6	+	27210195-27210244	6p22.1c	Homo sapiens histone cluster 1, H2ag (HIST1H2AG), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2A/p; H2A.1b; pH2A/f; H2AFP	H2A/p; H2A.1b; pH2A/f; H2AFP
Homo sapiens	RefSeq	NM_021064.3	ILMN_13095	HIST1H2AG	NM_021064.3	NM_021064.3		8969	38570130	NM_021064.3	HIST1H2AG	NP_066408.1	ILMN_2184602	0005700494	S	1848	CGGCGTAAGCCACCACGCCCGGCCCACTCTGAAGTAATCTTAAGAAGACG	6	+	27210647-27210696	6p22.1c	Homo sapiens histone cluster 1, H2ag (HIST1H2AG), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2A/p; H2A.1b; pH2A/f; H2AFP	H2A/p; H2A.1b; pH2A/f; H2AFP
Homo sapiens	RefSeq	NM_181337.2	ILMN_164709	KAAG1	NM_181337.2	NM_181337.2		353219	31560860	NM_181337.2	KAAG1	NP_851854.1	ILMN_1774565	0003400609	S	1153	CTTCTGAGCAGGAGCCGGAAACGCGCGGGGCCTTCAAACAGGCACGCCTA	6	+	24466262-24466311	6p22.2b	Homo sapiens kidney associated antigen 1 (KAAG1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10601354] [evidence NAS]		MGC78738; RU2AS; RU2	MGC78738; RU2AS; RU2
Homo sapiens	RefSeq	XR_038930.1	ILMN_335637	LOC100130980	XR_038930.1	XR_038930.1		100130980	169179108	XR_038930.1	LOC100130980		ILMN_3199916	0004640056	A	745	GCCATCTCTAAGACCTACAGCTACCTGACCCCCGACCTCTGGAAGATTGT				9q31.1a	PREDICTED: Homo sapiens misc_RNA (LOC100130980), miscRNA.					
Homo sapiens	RefSeq	NM_001001656.1	ILMN_21802	OR9A4	NM_001001656.1	NM_001001656.1		130075	48717230	NM_001001656.1	OR9A4	NP_001001656.1	ILMN_1739155	0007160195	S	864	CATCTTCACCCTCCGGAATGATAAAGTCATAGAGGCCCTTCGGGATGGGG	7	+	141266008-141266057	7q34e	Homo sapiens olfactory receptor, family 9, subfamily A, member 4 (OR9A4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	Hs.460956	ILMN_171254	LOC728660	XM_001128340.1	XM_001128340.1		728660	113430111	XM_001128340.1	LOC728660	XP_001128340.1	ILMN_1886050	0001980465	S	405	CAGAAGCCGCTGGCAAAAGCAAACCATCCCAAGTAACCATCTCTGCTGCC	X	+	138927679-138927728	Xq27.1b	PREDICTED: Homo sapiens hypothetical protein LOC728660 (LOC728660), mRNA.					
Homo sapiens	RefSeq	NM_023934.3	ILMN_615	FUNDC2	NM_023934.3	NM_023934.3		65991	63054874	NM_023934.3	FUNDC2	NP_076423.2	ILMN_1669118	0001940039	S	2654	CCTGCTTCCCCACACTCTGCCTCTCCTGACATCTGGGTCTCTGGGTTATG	X	+	153938075-153938124	Xq28g-q28h	Homo sapiens FUN14 domain containing 2 (FUNDC2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]			MGC131676; FLJ33773; MGC2495; HCC3; DC44; PD03104; HCBP6	MGC131676; FLJ33773; MGC2495; HCC3; DC44; PD03104; HCBP6
Homo sapiens	RefSeq	NM_000185.3	ILMN_14456	SERPIND1	NM_000185.3	NM_000185.3		3053	73858565	NM_000185.3	SERPIND1	NP_000176.2	ILMN_1707975	0001440270	S	1888	TCCTTGCACACCTGACTCTGTCACTCAAGCCTTTCTCCACCAGGCCCCTC	22	+	19471675-19471724	22q11.21e	Homo sapiens serpin peptidase inhibitor, clade D (heparin cofactor), member 1 (SERPIND1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	D22S673; HC2; HCII; HLS2; LS2; HCF2	D22S673; HC2; HCII; HLS2; LS2; HCF2
Homo sapiens	RefSeq	XM_001718660.1	ILMN_334861	LOC100134400	XM_001718660.1	XM_001718660.1		100134400	169215917	XM_001718660.1	LOC100134400	XP_001718712.1	ILMN_3235576	0005270719	S	2285	TAAAGAGGTCGCCGCCCACGGCGTCGCTAACGAGGACCCTGACGCCGTCC					PREDICTED: Homo sapiens hypothetical protein LOC100134400 (LOC100134400), partial mRNA.					
Homo sapiens	RefSeq	XM_001715791.1	ILMN_337070	LOC728416	XM_001715791.1	XM_001715791.1		728416	169172343	XM_001715791.1	LOC728416	XP_001715843.1	ILMN_3298671	0007150136	M	276	ATACAAGAGAGCCTTTAACTGGTTCTCAAACCTTATTCAAAATAAGAGAA				7p11.2a	PREDICTED: Homo sapiens similar to hCG1983241 (LOC728416), mRNA.					
Homo sapiens	RefSeq	NM_020755.2	ILMN_24825	SERINC1	NM_020755.2	NM_020755.2		57515	34222115	NM_020755.2	SERINC1	NP_065806.1	ILMN_1741613	0002680487	S	2744	GGATTGCTGGTGTCCAGCATGACCCATAAACAGGTCAGAAGAATGATGGA	6	-	122806526-122806575	6q22.31c	Homo sapiens serine incorporator 1 (SERINC1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. They are important constituents of cell membranes [goid 6658] [evidence ISS]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence ISS]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The directed movement of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells [goid 15825] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51347] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the transfer of L-serine from one side of a membrane to the other. L-serine is the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 15194] [evidence ISS]	TDE2; KIAA1253; TDE1L; TMS-2	TDE2; KIAA1253; TDE1L; TMS-2
Homo sapiens	RefSeq	NR_002216.1	ILMN_17468	NXF4	NR_002216.1	NR_002216.1		55999	62632711	NR_002216.1	NXF4		ILMN_1754260	0006590673	S	3194	GCTCCTTGCCTACCCTCTCCCAGAAGCAGCAGGAAATGGTGGAGACTGTC	X	+	101710097-101710146	Xq22.1e	Homo sapiens nuclear RNA export factor 4 pseudogene (NXF4), non-coding RNA.				FLJ42710	FLJ42710
Homo sapiens	RefSeq	NR_002216.1	ILMN_17468	NXF4	NR_002216.1	NR_002216.1		55999	62632711	NR_002216.1	NXF4		ILMN_1790043	0004920687	S	2952	AAGCCTACCAGCCAAGGAATCCGAAAGGTGGGCAGAGCAGGGGCTTGGAA	X	+	101709855-101709904	Xq22.1e	Homo sapiens nuclear RNA export factor 4 pseudogene (NXF4), non-coding RNA.				FLJ42710	FLJ42710
Homo sapiens	Unigene	Hs.121380	ILMN_75735	HS.121380	Hs.121380		Hs.121380		4986156	AI698256			ILMN_1879087	0000270102	S	101	ACCTAGCCATCCAGGTGAACAGATGCCCCCTTCTTGCAGCCCACTCGCAT	14	+	20412400-20412449		wa70h06.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2301563 3 similar to SW:RSFR_CHICK P30374 RIBONUCLEASE HOMOLOG PRECURSOR ;, mRNA sequence					
Homo sapiens	RefSeq	NM_000142.2	ILMN_22960	FGFR3	NM_000142.2	NM_000142.2		2261	13112046	NM_000142.2	FGFR3	NP_000133.1	ILMN_1651966	0003370019	I	1117	GAGGAGGAGCTGGTGGAGGCTGACGAGGCGGGCAGTGTGTATGCAGGCAT	4	+	1775857-1775906	4p16.3b	Homo sapiens fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism) (FGFR3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11294897] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16597617] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10918587] [evidence TAS]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 10918587] [evidence TAS]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8601314] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 10918587] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 10918587] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 7923141] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14732692] [evidence IPI]	HSFGFR3EX; JTK4; CD333; ACH; CEK2	HSFGFR3EX; JTK4; CD333; ACH; CEK2
Homo sapiens	RefSeq	NM_024768.1	ILMN_7566	CCDC48	NM_024768.1	NM_024768.1		79825	13376112	NM_024768.1	CCDC48	NP_079044.1	ILMN_1751099	0005310685	S	1610	GGCTCCCTGGTAGAAGCTGGCCTTGAACCAGCTCTAGAGGACAGGTAGGA	3	+	130241920-130241969	3q21.3c	Homo sapiens coiled-coil domain containing 48 (CCDC48), mRNA.				FLJ12057; MGC138400	FLJ12057; MGC138400
Homo sapiens	RefSeq	NM_014485.2	ILMN_12474	HPGDS	NM_014485.2	NM_014485.2		27306	62422566	NM_014485.2	HPGDS	NP_055300.1	ILMN_1713753	0001070482	S	1480	TGTAGATACCCCAGAGATCAAGAGAAGGAGAAGACAAGCCACAGACTTGG	4	-	95438815-95438864	4q22.3a	Homo sapiens hematopoietic prostaglandin D synthase (HPGDS), mRNA.					
Homo sapiens	RefSeq	NM_002586.3	ILMN_7500	PBX2	NM_002586.4	NM_002586.4		5089	124494249	NM_002586.4	PBX2	NP_002577.2	ILMN_1682699	0005820681	S	3106	GGGAGGCATGGGCCGGGGGCAGTTCTCTCCTCACTTGTAAACTTGTGTAG	6	-	32260545-32260594	6p21.32b	Homo sapiens pre-B-cell leukemia homeobox 2 (PBX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	G17; PBX2MHC; HOX12	G17; PBX2MHC; HOX12
Homo sapiens	RefSeq	NM_001052.1	ILMN_178806	SSTR4	NM_001052.1	NM_001052.1		6754	4557862	NM_001052.1	SSTR4	NP_001043.1	ILMN_1684200	0000010376	S	1073	GGTGCATGTGCCCCCCACTAAAATGCCAGCAGGAAGCCCTGCAACCAGAA	20	+	22965193-22965242	20p11.21c	Homo sapiens somatostatin receptor 4 (SSTR4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8100352] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 8405411] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9892014] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with somatostatin to initiate a change in cell activity [goid 4994] [pmid 9892014] [evidence TAS]; Combining with the cyclic peptide hormone melanin-concentrating hormone to initiate a change in cell activity [goid 30273] [evidence IEA]		
Homo sapiens	RefSeq	NM_004840.2	ILMN_26689	ARHGEF6	NM_004840.2	NM_004840.2		9459	47078220	NM_004840.2	ARHGEF6	NP_004831.1	ILMN_1803423	0000770703	S	5105	TGGGTTCCTGTTGCCCTGTAATTAAACTGCTGCCCGTAGAGGCCTTTCAG	X	-	135747826-135747875	Xq26.3b-q26.3c	Homo sapiens Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 (ARHGEF6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11017088] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11564864] [evidence NAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 11564864] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [pmid 11017088] [evidence NAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9582122] [evidence NAS]	COOL2; PIXA; MRX46; KIAA0006; alpha-PIX; Cool-2; alphaPIX	MRX46; KIAA0006; alpha-PIX; Cool-2; alphaPIX; COOL2; PIXA
Homo sapiens	RefSeq	NM_017732.3	ILMN_165662	PH-4	NM_017732.3	NM_017732.3		54681	62953124	NM_017732.3	PH-4	NP_060202.2	ILMN_1717461	0002100398	I	2015	TGGCCTGCCCTATTGTCTCCCATCCTAGTCTGTCCTGGTCCCTGGCAACA	3	+	49018076-49018125	3p21.31d	Homo sapiens hypoxia-inducible factor prolyl 4-hydroxylase (PH-4), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_016178.1	ILMN_7506	OAZ3	NM_016178.1	NM_016178.1		51686	7710049	NM_016178.1	OAZ3	NP_057262.1	ILMN_1681892	0002650280	S	599	GTTTGTGAACTTCCAGAATGATCGGAACGACAGAGGTGCCCTGCTGCGGG	1	+	150009323-150009357:150010177-150010191	1q21.3a	Homo sapiens ornithine decarboxylase antizyme 3 (OAZ3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10781085] [evidence TAS]	The stopping, prevention or reduction of the activity of the enzyme ornithine decarboxylase [goid 8073] [pmid 10781085] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The stopping, prevention or reduction of the activity of the enzyme ornithine decarboxylase [goid 8073] [evidence IEA]	TISP15; OAZ-t	TISP15; OAZ-t
Homo sapiens	Unigene	Hs.576374	ILMN_128555	HS.576374	Hs.576374		Hs.576374		679169	T68021			ILMN_1870671	0002570445	S	58	CCAAGAGGAGATGATGGTGGCCTGGATGAGGGTAGTGGTCGTGGAGGAAG	1	+	31694060-31694109		yc39e06.r1 Stratagene liver (#937224) Homo sapiens cDNA clone IMAGE:83074 5, mRNA sequence					
Homo sapiens	RefSeq	NM_006760.1	ILMN_6294	UPK2	NM_006760.2	NM_006760.2		7379	142343646	NM_006760.2	UPK2	NP_006751.1	ILMN_1685934	0002190154	S	763	GTGCCTCACCTTCCAACACTCCATTATTCCTCTCACCCCACTCCTGTCAG	11	+	118334326-118334375	11q23.3e	Homo sapiens uroplakin 2 (UPK2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8175808] [evidence TAS]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9515818] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [pmid 10514386] [evidence IDA]		MGC138598	MGC138598
Homo sapiens	RefSeq	XM_926730.1	ILMN_33684	LOC653297	XM_926730.1	XM_926730.1		653297	89060345	XM_926730.1	LOC653297	XP_931823.1	ILMN_1803852	0005670563	S	20	CCTCCAGCCCATTGTCCAACAACCACCCACCAACACCAAAGAGGTTGCCA	X	-	151646998-151647005:151647216-151647257		PREDICTED: Homo sapiens similar to CSAG family, member 2 (LOC653297), mRNA.					
Homo sapiens	RefSeq	NM_004866.4	ILMN_169565	SCAMP1	NM_004866.4	NM_004866.4		9522	116256357	NM_004866.4	SCAMP1	NP_004857.4	ILMN_3251337	0004220687	S	5579	GTGCTGGCCGTGTTTCAAATGGCAAGGGAACATGGGAACTATCATGTGGC	5	+	77775108-77775157	5q14.1b	Homo sapiens secretory carrier membrane protein 1 (SCAMP1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IEA]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles [goid 6892] [pmid 9378760] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		SCAMP; SCAMP37	SCAMP; SCAMP37
Homo sapiens	RefSeq	NM_052822.2	ILMN_169565	SCAMP1	NM_004866.4	NM_004866.4		9522	116256357	NM_004866.4	SCAMP1	NP_004857.4	ILMN_1728907	0001050544	A	3649	GCCATCATGGTGACTGTCATGGTTCTACAGAAATGCCCTCCATGTGTCCC	5	+	77773178-77773227	5q14.1b	Homo sapiens secretory carrier membrane protein 1 (SCAMP1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IEA]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles [goid 6892] [pmid 9378760] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		SCAMP; SCAMP37	SCAMP; SCAMP37
Homo sapiens	RefSeq	NM_004866.3	ILMN_169565	SCAMP1	NM_004866.4	NM_004866.4		9522	116256357	NM_004866.4	SCAMP1	NP_004857.4	ILMN_1729058	0002650022	I	681	GTGTTGATTCTGCAAGAGCGGTTGATTTTGGATTGAGTATCCTGTGGTTC	5	+	77712440-77712473:77714599-77714614	5q14.1b	Homo sapiens secretory carrier membrane protein 1 (SCAMP1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence IEA]; The lipid bilayer surrounding a zymogen granule [goid 42589] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles [goid 6892] [pmid 9378760] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		SCAMP; SCAMP37	SCAMP; SCAMP37
Homo sapiens	RefSeq	NM_016172.2	ILMN_15712	UBAC1	NM_016172.2	NM_016172.2		10422	55770883	NM_016172.2	UBAC1	NP_057256.2	ILMN_1807044	0002850112	S	1695	TCCAGTGCTCCTCTGGGCTCTTGAGTTGCTGCTTGAATTGCCGTGTAGAC	9	-	138824937-138824986	9q34.3c	Homo sapiens UBA domain containing 1 (UBAC1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	GBDR1; RP11-432J22.3; UBADC1	GBDR1; RP11-432J22.3; UBADC1
Homo sapiens	RefSeq	NM_021005.2	ILMN_22727	NR2F2	NM_021005.2	NM_021005.2		7026	31377723	NM_021005.2	NR2F2	NP_066285.1	ILMN_1745785	0006020458	S	2485	CTGGAGGAACCACATATAACACTTAACTTCCCCTACCCTGCCCCTCCCCA	15	+	94682514-94682563	15q26.2c	Homo sapiens nuclear receptor subfamily 2, group F, member 2 (NR2F2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1899293] [evidence TAS]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur [goid 9956] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IEA]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1899293] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 1899293] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1899293] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA];  [goid 3706] [pmid 8530078] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 1899293] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	COUP-TFII; TFCOUP2; MGC117452; COUPTFB; SVP40; ARP1	COUP-TFII; TFCOUP2; MGC117452; COUPTFB; SVP40; ARP1
Homo sapiens	RefSeq	NM_021005.2	ILMN_22727	NR2F2	NM_021005.2	NM_021005.2		7026	31377723	NM_021005.2	NR2F2	NP_066285.1	ILMN_2094360	0007380202	S	2589	CTGTGGAATTTATTGGCAGCCAAGGAATGTGTCCAAGACACATGCTGAGG	15	+	94682618-94682667	15q26.2c	Homo sapiens nuclear receptor subfamily 2, group F, member 2 (NR2F2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1899293] [evidence TAS]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur [goid 9956] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IEA]; The process whose specific outcome is the progression of a limb over time, from its formation to the mature structure. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 60173] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 1899293] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 1899293] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1899293] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA];  [goid 3706] [pmid 8530078] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 1899293] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	COUP-TFII; TFCOUP2; MGC117452; COUPTFB; SVP40; ARP1	COUP-TFII; TFCOUP2; MGC117452; COUPTFB; SVP40; ARP1
Homo sapiens	RefSeq	NM_020063.1	ILMN_575	BARHL2	NM_020063.1	NM_020063.1		343472	39930382	NM_020063.1	BARHL2	NP_064447.1	ILMN_1706493	0006620500	S	1318	GGAAGGCAGAGGAGTAAGAGAGGAAGATGCTTACCAGTGGGCAGGGGACC	1	-	91177707-91177756	1p22.2b	Homo sapiens BarH-like homeobox 2 (BARHL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; Any process that modulates the rate, direction or extent of axon extension [goid 30516] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 45727] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_015719.2	ILMN_16905	COL5A3	NM_015719.3	NM_015719.3		50509	110735434	NM_015719.3	COL5A3	NP_056534.2	ILMN_1796288	0005560300	S	5838	GGGACTTCCCTTGACTGGGTTGTGTTTCTTTTCCTGCCTCAGCCCAGCTC	19	-	10070523-10070572	19p13.2c	Homo sapiens collagen, type V, alpha 3 (COL5A3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen heterotrimer containing type V alpha chains; [alpha1(V)]2alpha2(V) and alpha1(V)alpha2(V)alpha3(V) trimers have been observed; type V collagen triple helices associate to form fibrils [goid 5588] [pmid 1571108] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 10722718] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10722718] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]		
Homo sapiens	RefSeq	NM_002860.3	ILMN_172838	ALDH18A1	NM_002860.3	NM_002860.3		5832	62912455	NM_002860.3	ALDH18A1	NP_002851.2	ILMN_2302716	0002370255	A	3215	TGCATCCAGGAGATGCTGTGTTCCCCGTGATGCAGCTGGAACCCAAGCTG	10	-	97375179-97375202:97376234-97376259	10q23.33d	Homo sapiens aldehyde dehydrogenase 18 family, member A1 (ALDH18A1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [pmid 8761662] [evidence TAS]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: ATP + L-glutamate = ADP + L-glutamate 5-phosphate [goid 4349] [evidence IEA]; Catalysis of the reaction: L-glutamate 5-semialdehyde + phosphate + NADP+ = L-gamma-glutamyl 5-phosphate + NADPH + H+ [goid 4350] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PYCS; GSAS; P5CS; MGC117316	PYCS; GSAS; P5CS; MGC117316
Homo sapiens	RefSeq	XM_935804.1	ILMN_31441	LOC641743	XM_935804.1	XM_935804.1		641743	89027453	XM_935804.1	LOC641743	XP_940897.1	ILMN_1683742	0005960220	S	241	GGATCCTTGCATCCTTGGATCCTACCGGCAGAGGCCGTTGAGAAAGCAGT					PREDICTED: Homo sapiens hypothetical protein LOC641743 (LOC641743), mRNA.					
Homo sapiens	RefSeq	NM_139238.1	ILMN_5523	ADAMTSL1	NM_139238.1	NM_139238.1		92949	21327692	NM_139238.1	ADAMTSL1	NP_640329.1	ILMN_1684919	0002470044	I	2056	TCCCTGCCCAGCAAGAAGCAGTATCGACTCAGCATGGAACGCCTGCAACG	9	+	18711649-18711663:18713016-18713050	9p22.2a-p22.1b	Homo sapiens ADAMTS-like 1 (ADAMTSL1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC40193; ADAMTSR1	MGC40193; ADAMTSR1
Homo sapiens	RefSeq	XM_938215.1	ILMN_171426	LOC649137	XM_001131980.1	XM_001131980.1		649137	113428365	XM_001131980.1	LOC649137	XP_001131980.1	ILMN_1743503	0006580296	S	564	ATCCCCAGAGCCTCAGCTTCCAAACAGTCCCAGCCCTGCGGGCCCAGTCA	19	+	61411334-61411365:61411900-61411917	19q13.43a	PREDICTED: Homo sapiens similar to zinc finger and SCAN domain containing 5 (LOC649137), mRNA.					
Homo sapiens	RefSeq	NM_015229.2	ILMN_43322	KIAA0664	NM_015229.3	NM_015229.3		23277	87162454	NM_015229.3	KIAA0664	NP_056044.3	ILMN_1770719	0007400711	S	4864	GACGTGATGTCGCTTCTCTGGTGCCCAGCTCCCTTCCTGGTCTGAGACTA	17	-	2592990-2593039	17p13.3c	Homo sapiens KIAA0664 (KIAA0664), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZp686L05242; DKFZp686M09233; FLJ23672; CLU1	DKFZp686L05242
Homo sapiens	RefSeq	XM_926501.1	ILMN_38205	LOC642516	XM_926501.1	XM_926501.1		642516	88943398	XM_926501.1	LOC642516	XP_931594.1	ILMN_1667001	0005220241	S	2102	ACTGAATTTAACTGAGGTTCCAGAGGAAGGTCTTCAGGACTCAGACTTAT	1	+	146717822-146717871		PREDICTED: Homo sapiens similar to profilin 1 (LOC642516), mRNA.					
Homo sapiens	RefSeq	NM_002117.4	ILMN_23822	HLA-C	NM_002117.4	NM_002117.4		3107	52630341	NM_002117.4	HLA-C	NP_002108.4	ILMN_2150787	0007150630	S	1412	GAACCTGAATATAAATTTGTGTTCTCAAATATTTGCTATGAAGCGTTGAT	6	-	31344571-31344620	6p21.33a	Homo sapiens major histocompatibility complex, class I, C (HLA-C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 3485286] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1384166] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2708822] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2787363] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2843461] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2787363] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 3485286] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1384166] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2708822] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2787363] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2843461] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2787363] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 3485286] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 1384166] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2708822] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2787363] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2843461] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2787363] [evidence NAS]	FLJ27082; PSORS1; Cw*1701; D6S204; HLC-C; HLA-Cw; HLA-JY3	FLJ27082; PSORS1; Cw*1701; D6S204; HLC-C; HLA-Cw; HLA-JY3
Homo sapiens	RefSeq	NM_002117.4	ILMN_23822	HLA-C	NM_002117.4	NM_002117.4		3107	52630341	NM_002117.4	HLA-C	NP_002108.4	ILMN_1721113	0007200398	S	858	ATATGCAGCACGAGGGGCTGCAAGAGCCCCTCACCCTGAGCTGGGAGCCA	6	-	31345836-31345841:31345966-31346009	6p21.33a	Homo sapiens major histocompatibility complex, class I, C (HLA-C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 3485286] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1384166] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2708822] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2787363] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2843461] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2787363] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]	The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 3485286] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1384166] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2708822] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2787363] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2843461] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2787363] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen on its cell surface in association with an MHC class I protein complex. Class I here refers to classical class I molecules [goid 2474] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 3485286] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 1384166] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2708822] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2787363] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2843461] [evidence NAS]; Combining with an MHC class I protein complex to initiate a change in cellular activity. Class I here refers to classical class I molecules [goid 32393] [pmid 2787363] [evidence NAS]	FLJ27082; PSORS1; Cw*1701; D6S204; HLC-C; HLA-Cw; HLA-JY3	FLJ27082; PSORS1; Cw*1701; D6S204; HLC-C; HLA-Cw; HLA-JY3
Homo sapiens	RefSeq	NM_020064.2	ILMN_182511	BARHL1	NM_020064.2	NM_020064.2		56751	31542183	NM_020064.2	BARHL1	NP_064448.1	ILMN_1737662	0002760646	S	1710	ATGAGCCCGTGACCGTGTCCGTGGATTAGTGAGTCTGTGGCCTGTGCCCT	9	+	134455264-134455313	9q34.13b	Homo sapiens BarH-like homeobox 1 (BARHL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_033553.2	ILMN_163835	GUCA2A	NM_033553.2	NM_033553.2		2980	38176148	NM_033553.2	GUCA2A	NP_291031.2	ILMN_1763749	0007100181	S	511	GCCTCGCCCCAACACTGTCCTTCCCTGCCACTTCAACCCCCAGCTAATAA	1	-	42628376-42628425	1p34.2b	Homo sapiens guanylate cyclase activator 2A (guanylin) (GUCA2A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8095028] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 7947768] [evidence NAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Increases the activity of guanylate cyclase [goid 30250] [pmid 8095028] [evidence NAS]	GUCA2; GUANYLIN; STARA	GUCA2; GUANYLIN; STARA
Homo sapiens	RefSeq	NM_002018.2	ILMN_25947	FLII	NM_002018.2	NM_002018.2		2314	22547155	NM_002018.2	FLII	NP_002009.1	ILMN_1737170	0001300167	S	3727	GTATATATCCAGCACATGCGGTCCAAGGAACATGAGCGGCCGCGCCGGCT	17	-	18148536-18148585	17p11.2f	Homo sapiens flightless I homolog (Drosophila) (FLII), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9177775] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 9177775] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9671805] [evidence IPI]	Fli1; FLIL; MGC39265; FLI	Fli1; FLIL; MGC39265; FLI
Homo sapiens	RefSeq	NR_031701.1	ILMN_388743	MIR1255B1	NR_031701.1	NR_031701.1		100313806	269847497	NR_031701.1	MIR1255B1		ILMN_3309046	0002070500	S	4	GATGAGCAAAGAAAGTGGTTTCTTAAAATGGAATCTACTCTTTGTGAAGA					Homo sapiens microRNA 1255b-1 (MIR1255B1), microRNA.					
Homo sapiens	RefSeq	NM_139022.2	ILMN_12383	TSPAN32	NM_139022.2	NM_139022.2		10077	37595531	NM_139022.2	TSPAN32	NP_620591.3	ILMN_1760449	0001850053	I	153	CGAGTCAGGGTTGCCAAATGCCAGATGCTGGTCACCTGCTTCTTTATCTT	11	+	2279971-2280020	11p15.5a	Homo sapiens tetraspanin 32 (TSPAN32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10950922] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	PHEMX; PHMX; TSSC6; MGC22455	PHEMX; PHMX; TSSC6; MGC22455
Homo sapiens	RefSeq	XM_496783.2	ILMN_33578	LOC441114	XM_496783.2	XM_496783.2		441114	88986435	XM_496783.2	LOC441114	XP_496783.2	ILMN_1796268	0007610497	A	315	CCAAAAAGCAACCAACTTAGCCAGCTTTATTTGCAAAACAAGGAAATAAA	5	+	165742191-165742239:165742240-165742240	5q34f	PREDICTED: Homo sapiens hypothetical LOC441114 (LOC441114), mRNA.					
Homo sapiens	RefSeq	NM_002149.2	ILMN_12582	HPCAL1	NM_134421.1	NM_134421.1		3241	19913442	NM_134421.1	HPCAL1	NP_602293.1	ILMN_1764850	0000520184	A	1771	TGCATGTGTGCCCTGAGCCGTGATGATCCTCCCATCCGTGTTGTGAGCAC	2	+	10484818-10484867	2p25.1c	Homo sapiens hippocalcin-like 1 (HPCAL1), transcript variant 2, mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8038222] [evidence TAS]	HLP2; VILIP-3; BDR1	HLP2; VILIP-3; BDR1
Homo sapiens	RefSeq	NM_134421.1	ILMN_12582	HPCAL1	NM_134421.1	NM_134421.1		3241	19913442	NM_134421.1	HPCAL1	NP_602293.1	ILMN_2240457	0000270674	I	449	AGCGTTCTCAGGCTAGCCCTCCCTGCTGAAAAGAGAACCGTGTGGGACTC	2	+	10444031-10444068:10454412-10454423	2p25.1c	Homo sapiens hippocalcin-like 1 (HPCAL1), transcript variant 2, mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8038222] [evidence TAS]	HLP2; VILIP-3; BDR1	HLP2; VILIP-3; BDR1
Homo sapiens	RefSeq	XM_934436.1	ILMN_35221	LOC647154	XM_934436.1	XM_934436.1		647154	89036727	XM_934436.1	LOC647154	XP_939529.1	ILMN_1805019	0007510239	S	1164	TCCATTGCTTTTGCAGGGTTTGTTATTGAGGGAACCCTGCCTTTCCCAGC	13	+	49880934-49880983	13q14.3a-q14.3b	PREDICTED: Homo sapiens hypothetical protein LOC647154 (LOC647154), mRNA.					
Homo sapiens	RefSeq	NM_024829.4	ILMN_27776	FLJ22662	NM_024829.4	NM_024829.4		79887	55743115	NM_024829.4	FLJ22662	NP_079105.3	ILMN_1707286	0002140288	S	1665	CAGTACACATCCTATGCCATAAGTGGTCCCACAGTACAAGGTGGCCTCCC	12	-	14548081-14548130	12p13.1a	Homo sapiens hypothetical protein FLJ22662 (FLJ22662), mRNA.					
Homo sapiens	RefSeq	NM_017580.1	ILMN_22536	ZRANB1	NM_017580.2	NM_017580.2		54764	110815808	NM_017580.2	ZRANB1	NP_060050.2	ILMN_1757742	0001410427	S	2390	CCCCCTGGTCACTCAGATGGTAGAAAAATGGCTTGACCGCTACCGACAGA	10	+	126645172-126645221	10q26.13e	Homo sapiens zinc finger, RAN-binding domain containing 1 (ZRANB1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11463333] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11463333] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11463333] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp762P2216; TRABID	DKFZp762P2216; TRABID
Homo sapiens	RefSeq	XM_937141.1	ILMN_35780	LOC347364	XM_937141.1	XM_937141.1		347364	89060887	XM_937141.1	LOC347364	XP_942234.1	ILMN_1737430	0000770600	A	3	GAGTGCAGCCACGATTGAGAAGAAAGCCACAGCAACCATCAGTGGCAAGT				Xq21.1c	PREDICTED: Homo sapiens similar to WW domain binding protein 11 (LOC347364), mRNA.					
Homo sapiens	RefSeq	NM_001001695.1	ILMN_14402	FLJ42418	NM_001001695.1	NM_001001695.1		400941	48717395	NM_001001695.1	FLJ42418	NP_001001695.1	ILMN_1676077	0005570056	S	1602	GAGACCCAAGATCTCTGTCCAGGCAGGGCCATCAAAACATAGAAGTGCTC	2	-	6787230-6787245:6788232-6788265	2p25.2a	Homo sapiens FLJ42418 protein (FLJ42418), mRNA.					
Homo sapiens	RefSeq	NM_172163.1	ILMN_1777	KCNQ4	NM_172163.1	NM_172163.1		9132	26638654	NM_172163.1	KCNQ4	NP_751895.1	ILMN_1770014	0007100370	A	1884	TGCAAGTGCCGCTGTTCGACCCCGACATCACCTCCGACTACCACAGCCCT	1	+	41076658-41076707	1p34.2c	Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 4 (KCNQ4), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10025409] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10025409] [evidence TAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	KV7.4; DFNA2	DFNA2; KV7.4
Homo sapiens	RefSeq	XM_934134.1	ILMN_32574	LOC644624	XM_934134.1	XM_934134.1		644624	88976614	XM_934134.1	LOC644624	XP_939227.1	ILMN_1758077	0007380397	I	120	TGCTGACCTCCGTTTTCGAGTCCGCTTCCTGGGGAAACCTGAAACAGGAC	4	+	124637386-124637435	4q28.1a	PREDICTED: Homo sapiens hypothetical protein LOC644624, transcript variant 3 (LOC644624), mRNA.					
Homo sapiens	RefSeq	NM_021783.2	ILMN_20922	EDA2R	NM_021783.2	NM_021783.2		60401	40549449	NM_021783.2	EDA2R	NP_068555.1	ILMN_1767233	0002900259	S	3137	ATCATAATCCCTCCTGTCCCACTCCTCTCTACCAACCCCACCCTACTAGC	X	-	65815664-65815713	Xq12a-q12b	Homo sapiens ectodysplasin A2 receptor (EDA2R), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12270937] [evidence IC ]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 11039935] [evidence NAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 12270937] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [pmid 12270937] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 11039935] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11039935] [evidence IDA]; Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function [goid 5031] [pmid 11039935] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15280356] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	EDA-A2R; EDAA2R; XEDAR; TNFRSF27	EDA-A2R; EDAA2R; XEDAR; TNFRSF27
Homo sapiens	RefSeq	NR_003708.2	ILMN_365956	SNORA70C	NR_003708.2	NR_003708.2		100124538	193794861	NR_003708.2	SNORA70C		ILMN_3245878	0001470343	S	34	CATGGGGGCCCATTGTGCAATGGCTGCAAACAGCAGCTTTCTTGGTAGTG				9q33.1b	Homo sapiens small nucleolar RNA, H/ACA box 70C (retrotransposed) (SNORA70C), non-coding RNA.					
Homo sapiens	RefSeq	NM_001008388.1	ILMN_10566	CISD2	NM_001008388.1	NM_001008388.1		493856	56605993	NM_001008388.1	CISD2	NP_001008389.1	ILMN_1796397	0004260156	S	1315	ACGCTAGGGACTGGTTCCAGGGCCACACATATACCAAAATCTGCCCATAC	4	+	104028896-104028945	4q24b	Homo sapiens CDGSH iron sulfur domain 2 (CISD2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; The external (cytoplasmic face) of the mitochondrial outer membrane [goid 32473] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11256614] [evidence IDA]	Any process that modulates the frequency, rate or extent of cellular respiration, the enzymatic release of energy from organic compounds [goid 43457] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]	ERIS; WFS2; ZCD2; Miner1	ERIS; WFS2; ZCD2; Miner1
Homo sapiens	RefSeq	NM_005016.3	ILMN_10622	PCBP2	NM_005016.3	NM_005016.3		5094	54873621	NM_005016.3	PCBP2	NP_005007.2	ILMN_2312296	0001580537	A	1484	CCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAGCGATTCCAGGTT	12	+	52159536-52159585	12q13.13e	Homo sapiens poly(rC) binding protein 2 (PCBP2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [pmid 7556077] [evidence NAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 7607214] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	MGC110998; HNRPE2; hnRNP-E2	MGC110998; HNRPE2; hnRNP-E2
Homo sapiens	RefSeq	XR_038518.1	ILMN_343624	LOC100133049	XR_038518.1	XR_038518.1		100133049	169162745	XR_038518.1	LOC100133049		ILMN_3242591	0002230639	S	2814	CCCACTGGCAAAGAGCTCAGCACTGCCCAAATCCCATCTGTGTGGGTTTA	1	+	222207220-222207269	1q42.11a	PREDICTED: Homo sapiens misc_RNA (LOC100133049), miscRNA.					
Homo sapiens	RefSeq	XM_001714454.1	ILMN_339203	LOC100128389	XM_001714454.1	XM_001714454.1		100128389	169204694	XM_001714454.1	LOC100128389	XP_001714506.1	ILMN_3181473	0006450338	A	497	CGCAGCGGCGCCGAGGACAGTGCAGCCGAGTTGCGTCTCCCTCGCGCGAG				12q12e	PREDICTED: Homo sapiens hypothetical protein LOC100128389 (LOC100128389), mRNA.					
Homo sapiens	Unigene	Hs.538703	ILMN_104065	HS.538703	Hs.538703		Hs.538703		861724	R82333			ILMN_1816861	0004880025	S	210	GCAGTGGGAACTATTGGGAAGGGGAGGAGAGAGGAGAAGGCTCCAGCAAC	11	+	129107911-129107960		yj18b03.s1 Soares placenta Nb2HP Homo sapiens cDNA clone IMAGE:149069 3, mRNA sequence					
Homo sapiens	RefSeq	NM_031491.1	ILMN_2734	RBP5	NM_031491.1	NM_031491.1		83758	13899351	NM_031491.1	RBP5	NP_113679.1	ILMN_2103024	0006060553	S	728	GGTCAAGGTCTGGCGTCCCAAATGAAAGAAGCAGGCAAAGGGAAGGAGCC	12	-	7167716-7167765	12p13.31d	Homo sapiens retinol binding protein 5, cellular (RBP5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]	CRBP3; CRBP-III; CRBPIII	CRBP3; CRBP-III; CRBPIII
Homo sapiens	Unigene	Hs.254477	ILMN_83551	HS.254477	Hs.254477		Hs.254477		7020109	AK000189			ILMN_1894821	0000020441	S	1845	GCCTCTGTAGATGAACAATTGAGCCACACCCTGAAGTTTTCTCACCTCCC	3	-	36839740-36839789		Homo sapiens cDNA FLJ20182 fis, clone COLF0190					
Homo sapiens	RefSeq	NM_013996.1	ILMN_15614	TAC1	NM_013996.1	NM_013996.1		6863	7770074	NM_013996.1	TAC1	NP_054702.1	ILMN_2384409	0006860594	A	310	CGCCCGGAGACCCAAGCCTCAGCAGTTCTTTGGATTAATGGGCAAACGGG	7	+	97201015-97201064	7q21.3d	Homo sapiens tachykinin, precursor 1 (substance K, substance P, neurokinin 1, neurokinin 2, neuromedin L, neurokinin alpha, neuropeptide K, neuropeptide gamma) (TAC1), transcript variant alpha, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9548509] [evidence TAS]	Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 8957234] [evidence IDA]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The introduction of semen or sperm into the genital tract of a female [goid 7320] [pmid 1708336] [evidence TAS]; The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal [goid 9582] [pmid 9482938] [evidence TAS]		NK2; NKNA; Hs.2563; TAC2	NK2; NKNA; Hs.2563; TAC2
Homo sapiens	RefSeq	NM_015840.2	ILMN_20481	ADAR	NM_015840.2	NM_015840.2		103	70166943	NM_015840.2	ADAR	NP_056655.2	ILMN_2320964	0005490433	A	5884	CAGGTTGTTTGGCCTCTCTGGTCCATCTTGGGCATTAGGTTCTCCAGCAG	1	-	154555151-154555200	1q21.3e	Homo sapiens adenosine deaminase, RNA-specific (ADAR), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7565688] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7565688] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any base modification or substitution events that result in alterations in the coding potential or structural properties of RNAs as a result of changes in the base-pairing properties of the modified ribonucleoside(s) [goid 16553] [pmid 9020165] [evidence IDA]; Any process by which RNA molecules inactivate expression of target genes [goid 31047] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [pmid 7565688] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DRADA; K88dsRBP; ADAR1; IFI4; G1P1; DSRAD; IFI-4; p136; DSH	DRADA; K88dsRBP; ADAR1; IFI4; G1P1; DSRAD; IFI-4; p136; DSH
Homo sapiens	RefSeq	XM_931670.1	ILMN_165528	LOC133874	XM_059672.8	XM_059672.8		133874	113416861	XM_059672.8	LOC133874	XP_059672.4	ILMN_1715644	0003140639	A	227	CATCCCATCAAGACTGAGAACTTAGCAGAAGCAGAAAGAAACAACCCCCT	5	+	169605588-169605637	5q35.1c	PREDICTED: Homo sapiens hypothetical gene LOC133874, transcript variant 1 (LOC133874), mRNA.					
Homo sapiens	RefSeq	NM_014476.1	ILMN_27781	PDLIM3	NM_014476.1	NM_014476.1		27295	7656882	NM_014476.1	PDLIM3	NP_055291.1	ILMN_1695299	0000770463	S	1121	CCCCCAGAGGGCTATGACACGGTCACTCTGTATCCCAAAGCTTAAGTCTC	4	-	186660434-186660441:186660442-186660483	4q35.1f	Homo sapiens PDZ and LIM domain 3 (PDLIM3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]	Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686L0362; ALP	DKFZp686L0362; ALP
Homo sapiens	RefSeq	NM_014476.1	ILMN_27781	PDLIM3	NM_014476.1	NM_014476.1		27295	7656882	NM_014476.1	PDLIM3	NP_055291.1	ILMN_2230025	0006330008	S	1198	CACCCACGCGCACTTACACGAGAAGACATTCATGGCTTTGGGCAGAAGGA	4	-	186660357-186660406	4q35.1f	Homo sapiens PDZ and LIM domain 3 (PDLIM3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]	Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686L0362; ALP	DKFZp686L0362; ALP
Homo sapiens	RefSeq	NM_033122.2	ILMN_35179	C4ORF35	NM_033122.3	NM_033122.3		85438	90652862	NM_033122.3	C4orf35	NP_149113.3	ILMN_1692617	0001710433	S	1277	GCAACAAAAGGGATACCATGTAGAATTGTGCAATAGTCTAGCCAGCTAGC	4	+	71201947-71201996	4q13.3a	Homo sapiens chromosome 4 open reading frame 35 (C4orf35), mRNA.				FLJ32897; NYD-SP26	
Homo sapiens	RefSeq	NM_025160.4	ILMN_13821	WDR26	NM_025160.4	NM_025160.4		80232	55743152	NM_025160.4	WDR26	NP_079436.3	ILMN_1719343	0002030358	S	5833	CTCGTGCACATGTGAAGTGCCCTCTGAGTTTAAGGTTTGGTTAATACTGG	1	-	222640168-222640217	1q42.11b	Homo sapiens WD repeat domain 26 (WDR26), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15378603] [evidence IDA]			FLJ21016; MIP2; CDW2	FLJ21016; MIP2; CDW2
Homo sapiens	RefSeq	XM_926334.1	ILMN_34999	LOC642953	XM_926334.1	XM_926334.1		642953	89061319	XM_926334.1	LOC642953	XP_931427.1	ILMN_1726723	0002030692	S	252	CTGCCATGGAGGAGCTTTCTGCACTGTCAAGTCACCCAGTCCACTGAGAA	Y	-	11674428-11674477		PREDICTED: Homo sapiens similar to SH3/ankyrin domain gene 2 isoform a (LOC642953), mRNA.					
Homo sapiens	RefSeq	XM_942364.1	ILMN_42581	LOC652735	XM_942364.1	XM_942364.1		652735	89077190	XM_942364.1	LOC652735	XP_947457.1	ILMN_1652343	0004540170	S	5	GGGCAGGTCAGATAGACATTGACATTTCTGGTACAGCCACACCTACATGC					PREDICTED: Homo sapiens similar to hydrocephalus inducing (LOC652735), mRNA.					
Homo sapiens	RefSeq	NM_002740.4	ILMN_17385	PRKCI	NM_002740.5	NM_002740.5		5584	133908622	NM_002740.5	PRKCI	NP_002731.4	ILMN_1725188	0003930561	S	4588	GTTCGCTCAAAATACTCAACAGGGGAATAGGCAGCGGACAGTCAGAATGG	3	+	170023474-170023523	3q26.2c	Homo sapiens protein kinase C, iota (PRKCI), mRNA.	Protein complex that plays a role in determining cell polarity by directing the localized assembly of actin filaments at polarization sites; in Saccharomyces the polarisome includes Bni1p, Spa2p, Pea2p, and Bud6p [goid 133] [pmid 14676191] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11260256] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11257119] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8226978] [evidence TAS]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 11257119] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 11257119] [evidence NAS]; Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11257119] [evidence NAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 11257119] [evidence TAS]; The specification and formation of the polarity of a cell along its apical/basal axis [goid 35089] [evidence IEA]; Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve [goid 42462] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [pmid 14676191] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells [goid 45216] [pmid 11257119] [evidence IMP]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [pmid 8226978] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4700] [pmid 8226978] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12893243] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14676191] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8226978] [evidence TAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 8226978] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DXS1179E; MGC26534; PKCI; nPKC-iota	DXS1179E; MGC26534; PKCI; nPKC-iota
Homo sapiens	RefSeq	XM_938574.1	ILMN_42181	LOC649495	XM_938574.1	XM_938574.1		649495	89028742	XM_938574.1	LOC649495	XP_943667.1	ILMN_1749417	0001690450	S	1488	TCGTGAGCCATCGCGCCTGGCCGTGATAGAAACTTTCAGCTGAGGAGTCT					PREDICTED: Homo sapiens similar to Alpha-tocopherol transfer protein (Alpha-TTP) (LOC649495), mRNA.					
Homo sapiens	RefSeq	NM_020804.2	ILMN_1964	PACSIN1	NM_020804.2	NM_020804.2		29993	47834327	NM_020804.2	PACSIN1	NP_065855.1	ILMN_1751020	0004290133	S	4048	GCCGTCTGCCGCCCTAGGCTTCCTGACTCCATTAGTTCCGACACTTGTGA	6	+	34502814-34502863	6p21.31e	Homo sapiens protein kinase C and casein kinase substrate in neurons 1 (PACSIN1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence NAS]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	KIAA1379; SDPI	KIAA1379; SDPI
Homo sapiens	RefSeq	NM_138363.1	ILMN_24620	CCDC45	NM_138363.1	NM_138363.1		90799	19923898	NM_138363.1	CCDC45	NP_612372.1	ILMN_1686135	0002070593	S	2513	CCCTCCCTATGAGGCCAGACTTGATAATAGTAGGTGAAGGTTCTGGAGGC	17	+	59964348-59964359:59964360-59964397	17q24.1a	Homo sapiens coiled-coil domain containing 45 (CCDC45), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	DKFZp667E1824	DKFZp667E1824
Homo sapiens	RefSeq	NM_031217.2	ILMN_27839	KIF18A	NM_031217.2	NM_031217.2		81930	21314741	NM_031217.2	KIF18A	NP_112494.2	ILMN_1779153	0006040189	S	1929	TGGGCTGACCAAACTGGCGAACAACCAAAGCAAAACGATCTACCCGGGAT	11	-	28037101-28037150	11p14.1d	Homo sapiens kinesin family member 18A (KIF18A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DKFZP434G2226	DKFZP434G2226
Homo sapiens	RefSeq	NM_031217.2	ILMN_27839	KIF18A	NM_031217.2	NM_031217.2		81930	21314741	NM_031217.2	KIF18A	NP_112494.2	ILMN_2132161	0002470035	S	3026	CCCTGAGTGTAAGTTACCATGGTGGCAGCTTAGTTTTACTATGCCACAAC	11	-	27999027-27999076	11p14.1d	Homo sapiens kinesin family member 18A (KIF18A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DKFZP434G2226	DKFZP434G2226
Homo sapiens	RefSeq	NM_017489.1	ILMN_164297	TERF1	NM_017489.1	NM_017489.1		7013	9257245	NM_017489.1	TERF1	NP_059523.1	ILMN_1694847	0000110437	I	907	AGTGACAAACAGTCTGCGGTAACTGAATCCTCAGAGGGTACAGTATCCTT	8	+	74105129-74105178	8q21.11a	Homo sapiens telomeric repeat binding factor (NIMA-interacting) 1 (TERF1), transcript variant 1, mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [pmid 9391075] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [pmid 9034193] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [pmid 11313893] [evidence IDA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [pmid 9391075] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9391075] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11313893] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7502076] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9739097] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1406665] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9391075] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16166375] [evidence EXP]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 11943150] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]	The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 9391075] [evidence IEP]; Progressive reduction in length of the telomeres, the termini of eukaryotic chromosomes, that occurs as part of the cellular aging process [goid 1309] [pmid 9034193] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11313893] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 11313893] [evidence IDA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 9034193] [evidence IMP]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 7502076] [evidence NAS]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 9739097] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [pmid 11943150] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of microtubule polymerization [goid 31116] [pmid 11943150] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [pmid 11313893] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [pmid 9391075] [evidence IMP]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 9391075] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9739097] [evidence NAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7502076] [evidence NAS]; Interacting selectively with double-stranded telomere-associated DNA [goid 3691] [pmid 1406665] [evidence IDA]; Interacting selectively with double-stranded telomere-associated DNA [goid 3691] [pmid 12768206] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16275645] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9391075] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11375976] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11943150] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16275645] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 11943150] [evidence IDA]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [pmid 11313893] [evidence IDA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [pmid 9391075] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 9391075] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9391075] [evidence IDA]	t-TRF1; TRBF1; PIN2; FLJ41416; TRF; hTRF1-AS; TRF1	t-TRF1; TRBF1; FLJ41416; TRF; hTRF1-AS; PIN2; TRF1
Homo sapiens	RefSeq	XR_039148.1	ILMN_338720	LOC645175	XR_039148.1	XR_039148.1		645175	169169789	XR_039148.1	LOC645175		ILMN_3280220	0003060376	M	755	GTGGAAGACATCCCTTTAGGGTGTTAAATGCTATCACAGAGCTCCAGAAG				6q23.3a	PREDICTED: Homo sapiens misc_RNA (LOC645175), miscRNA.					
Homo sapiens	RefSeq	NM_006106.2	ILMN_19290	YAP1	NM_006106.2	NM_006106.2		10413	20986484	NM_006106.2	YAP1	NP_006097.1	ILMN_1709479	0003360768	S	4731	GTGGGTGGCAATATTCAGTGCTTAACACTTTTCTAGCGTTGGTACATCTG	11	+	101608998-101609047	11q22.1d-q22.2a	Homo sapiens Yes-associated protein 1, 65kDa (YAP1), mRNA.	Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7644498] [evidence IPI]	YAP65; YAP; YAP2	YAP65; YAP; YAP2
Homo sapiens	RefSeq	NR_031757.1	ILMN_388681	MIR718	NR_031757.1	NR_031757.1		100313781	269847754	NR_031757.1	MIR718		ILMN_3310740	0005340523	S	1	GCCGCGGCGCGCAAGATGGCGGCGGGCCCGGGCACCGCCCCTTCCGCCCC					Homo sapiens microRNA 718 (MIR718), microRNA.					
Homo sapiens	RefSeq	XM_933619.1	ILMN_32031	LOC646439	XM_933619.1	XM_933619.1		646439	89061241	XM_933619.1	LOC646439	XP_938712.1	ILMN_1686036	0000450224	S	293	TGAATACCCTATGCCACAGGGCATCTCCAGCTTCTGGGCCAGAGCCATAT	Y	+	7618856-7618905	Yp11.2f	PREDICTED: Homo sapiens hypothetical LOC646439 (LOC646439), mRNA.					
Homo sapiens	RefSeq	NM_078485.2	ILMN_16359	COL9A1	NM_078485.2	NM_078485.2		1297	73486663	NM_078485.2	COL9A1	NP_511040.2	ILMN_1665374	0005270279	I	72	CCACCTATGCTAGTGGCGGGTCTGGAAGCCTAGAGGGGAACCAGGCTGCA	6	-	71049511-71049560	6q13a	Homo sapiens collagen, type IX, alpha 1 (COL9A1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A collagen heterotrimer containing type IX alpha chains in alpha1(IX)alpha2(IX)alpha3(IX) trimers; type IX collagen triple helices associate to form a structure that links glycosaminoglycans to type II collagen fibrils [goid 5594] [pmid 9707347] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 3473493] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ40263; MED; DJ149L1.1.2	DJ149L1.1.2; FLJ40263; MED
Homo sapiens	RefSeq	XM_942303.1	ILMN_176564	LOC440225	XR_017179.1	XR_017179.1		440225	113425057	XR_017179.1	LOC440225		ILMN_1742200	0004280626	S	1185	CGAAACTGTGTCAGTTGGTTGAAGTAACGATGGCAAGGAGAGATGACCTC	15	-	19401791-19401840	15q11.2a-q11.2b	PREDICTED: Homo sapiens similar to Neurofibromin (Neurofibromatosis-related protein NF-1) (LOC440225), mRNA.					
Homo sapiens	RefSeq	XM_941755.1	ILMN_176564	LOC440225	XR_017179.1	XR_017179.1		440225	113425057	XR_017179.1	LOC440225		ILMN_1667052	0000010202	S	790	GTCCTCAGAGGGAAACGCAGGTACACCTGTCAGCAAATGTATGGATCAGC	15	-	19402826-19402875	15q11.2a-q11.2b	PREDICTED: Homo sapiens similar to Neurofibromin (Neurofibromatosis-related protein NF-1) (LOC440225), mRNA.					
Homo sapiens	RefSeq	XM_495949.2	ILMN_36897	FLJ32682	XM_942284.2	XM_942284.2		220081	113424336	XM_942284.2	FLJ32682	XP_947377.1	ILMN_1728889	0000460192	A	2070	GAAGAAAACCATCCTGGAGGCAGAACCCGGCCCAACAGCCCAGAAGATCC				13q14.12a	PREDICTED: Homo sapiens hypothetical protein FLJ32682, transcript variant 3 (FLJ32682), mRNA.					
Homo sapiens	RefSeq	NM_005238.2	ILMN_173009	ETS1	NM_005238.2	NM_005238.2		2113	41393580	NM_005238.2	ETS1	NP_005229.1	ILMN_2122103	0006370435	S	5081	GCTGATGCTGGCACATCATTTTGCTGGAGAGTTTTTTATATACTGTAGCC	11	-	127833933-127833982	11q24.3a	Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) (ETS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9266972] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10698492] [evidence IMP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7753825] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9266972] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2187191] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 2187191] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [pmid 8620536] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 9266972] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 7753825] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 10698492] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [pmid 9266972] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10698492] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7753825] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10698492] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10698492] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ10768; ETS-1; EWSR2	ETS-1; FLJ10768; EWSR2
Homo sapiens	RefSeq	NM_005238.2	ILMN_173009	ETS1	NM_005238.2	NM_005238.2		2113	41393580	NM_005238.2	ETS1	NP_005229.1	ILMN_1687538	0000240333	S	4621	CCATCTCTCTTCTAGTCATGCTGTGCATGCCGCTTACTCTGTTGGGGTCT	11	-	127834393-127834442	11q24.3a	Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) (ETS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9266972] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10698492] [evidence IMP]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7753825] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9266972] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2187191] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 2187191] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [pmid 8620536] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 9266972] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 7753825] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 10698492] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [pmid 9266972] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10698492] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7753825] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10698492] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10698492] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ10768; ETS-1; EWSR2	ETS-1; FLJ10768; EWSR2
Homo sapiens	RefSeq	NM_001025591.1	ILMN_2258	SCGBL	NM_001025591.2	NM_001025591.2		284402	121949781	NM_001025591.2	SCGBL	NP_001020762.1	ILMN_1768756	0001770292	S	18	CTGTCATGAGGGTGACATCCGCCACCTGTGCTCTTCTGCTGGCTCTGATC	19	-	39777263-39777308:39777309-39777312	19q13.11c	Homo sapiens secretoglobin-like (SCGBL), mRNA.					
Homo sapiens	RefSeq	NM_152345.3	ILMN_6562	ANKRD13B	NM_152345.4	NM_152345.4		124930	124517698	NM_152345.4	ANKRD13B	NP_689558.4	ILMN_1794070	0005910273	S	2890	GACTCTAAAACCCTTCATCCAATGGTGCTAACCCCCGGCTCTCCCCTGCC	17	+	24965622-24965671	17q11.2b	Homo sapiens ankyrin repeat domain 13B (ANKRD13B), mRNA.				FLJ25555; FLJ20418	FLJ25555
Homo sapiens	RefSeq	XM_001727017.1	ILMN_336840	LOC100131203	XM_001727017.1	XM_001727017.1		100131203	169169079	XM_001727017.1	LOC100131203	XP_001727069.1	ILMN_3230973	0002710162	I	628	CACACGTTTACATAACTTTGTATCGACCTGTGGATAGATCATTGGTTTGC				6q11.1b	PREDICTED: Homo sapiens hypothetical LOC100131203 (LOC100131203), mRNA.					
Homo sapiens	RefSeq	NM_016151.2	ILMN_9392	TAOK2	NM_016151.2	NM_016151.2		9344	45505129	NM_016151.2	TAOK2	NP_057235.2	ILMN_1701487	0000520333	I	4679	CTGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGT	16	+	29906990-29907039	16p11.2d	Homo sapiens TAO kinase 2 (TAOK2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [pmid 10660600] [evidence IDA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10660600] [evidence NAS]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 10660600] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10660600] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10660600] [evidence IDA]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 10660600] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 10660600] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 10660600] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [pmid 10660600] [evidence IDA]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [pmid 10660600] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10660600] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PSK1; TAO1; TAO2; MAP3K17; KIAA0881; PSK	PSK1; TAO1; TAO2; MAP3K17; KIAA0881; PSK
Homo sapiens	RefSeq	NM_000908.2	ILMN_21860	NPR3	NM_000908.2	NM_000908.2		4883	45505140	NM_000908.2	NPR3	NP_000899.1	ILMN_1665033	0002120048	S	2320	TCTAGAGCTGGAGGACAGGTTTGTGGTTGAGGACTTCTCTGTCCGATGTC	5	+	32760616-32760665	5p13.3b	Homo sapiens natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) (NPR3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10468599] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 8620881] [evidence TAS]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	NPRC; ANPRC	NPRC; ANPRC
Homo sapiens	RefSeq	NM_178138.2	ILMN_34107	LHX3	NM_178138.3	NM_178138.3		8022	88999599	NM_178138.3	LHX3	NP_835258.1	ILMN_1806395	0004290470	I	5	CGCACGACGCGGCGGGACTTGGGAGCCCCGAACCCTCCAGGGGACGCTGA	9	-	139096901-139096950	9q34.3d	Homo sapiens LIM homeobox 3 (LHX3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10598593] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10598593] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10903894] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10598593] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	M2-LHX3; DKFZp762A2013	M2-LHX3; DKFZp762A2013
Homo sapiens	RefSeq	NM_005577.2	ILMN_168334	LPA	NM_005577.2	NM_005577.2		4018	116292749	NM_005577.2	LPA	NP_005568.2	ILMN_2260643	0000610291	I	4190	CTCTCCTCACAACTCCCACGGTGGTCCCAGTTCCAAGCACAGAGCTTCCT	6	-	161007490-161007539	6q25.3f-q26a	Homo sapiens lipoprotein, Lp(a) (LPA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9548923] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8047165] [evidence NAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8047165] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [pmid 8047165] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an apolipoprotein, the protein component of a lipoprotein complex [goid 34185] [pmid 9269765] [evidence IPI]	LP; APOA; AK38	LP; APOA; AK38
Homo sapiens	RefSeq	NM_005577.2	ILMN_168334	LPA	NM_005577.2	NM_005577.2		4018	116292749	NM_005577.2	LPA	NP_005568.2	ILMN_2346987	0006510358	A	5888	CTTGTCTGCCATCCCCAGACTACATGGTCACCGCCAGGACTGAATGTTAC	6	-	160978430-160978479	6q25.3f-q26a	Homo sapiens lipoprotein, Lp(a) (LPA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9548923] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8047165] [evidence NAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8047165] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [pmid 8047165] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an apolipoprotein, the protein component of a lipoprotein complex [goid 34185] [pmid 9269765] [evidence IPI]	LP; APOA; AK38	LP; APOA; AK38
Homo sapiens	RefSeq	XM_926323.1	ILMN_168334	LPA	NM_005577.2	NM_005577.2		4018	116292749	NM_005577.2	LPA	NP_005568.2	ILMN_1731670	0002940086	S	5319	AACCACTGTTACTGGGACGCCATGCCAGGAATGGGCTGCCCAGGAGCCCC	6	-	160985922-160985971	6q25.3f-q26a	Homo sapiens lipoprotein, Lp(a) (LPA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9548923] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8047165] [evidence NAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8047165] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [pmid 8047165] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an apolipoprotein, the protein component of a lipoprotein complex [goid 34185] [pmid 9269765] [evidence IPI]	LP; APOA; AK38	
Homo sapiens	RefSeq	NM_080759.3	ILMN_20187	DACH1	NM_080760.3	NM_080760.3		1602	55749853	NM_080760.3	DACH1	NP_542938.1	ILMN_1755741	0006510554	A	4679	GGTAGCCTAGTTATTTGAGCCTGGTTTCAATGTGAGAACCACGTTTACTG	13	-	70910165-70910214	13q21.33d	Homo sapiens dachshund homolog 1 (Drosophila) (DACH1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14525983] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	DACH; FLJ10138	DACH; FLJ10138
Homo sapiens	RefSeq	NM_080760.3	ILMN_20187	DACH1	NM_080760.3	NM_080760.3		1602	55749853	NM_080760.3	DACH1	NP_542938.1	ILMN_2386053	0001190273	A	2022	CCGCAGTGGCGGCAGAACAGATGCTGAAAGGACAATACAAGATGGAAGAC	13	-	70912822-70912825:70947274-70947319	13q21.33d	Homo sapiens dachshund homolog 1 (Drosophila) (DACH1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14525983] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	DACH; FLJ10138	DACH; FLJ10138
Homo sapiens	RefSeq	NM_006973.2	ILMN_7256	ZNF32	NM_006973.2	NM_006973.2		7580	53759139	NM_006973.2	ZNF32	NP_008904.1	ILMN_1680072	0006520301	I	27	CGCTGCTGCGGGCTCGGCGCCGGCCTTTGTCTGCGGGCACGCGCCGCTGC	10	-	44144250-44144299	10q11.21b	Homo sapiens zinc finger protein 32 (ZNF32), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX30	KOX30
Homo sapiens	RefSeq	XM_001133639.2	ILMN_176417	LOC732435	XM_001133639.2	XM_001133639.2		732435	169218250	XM_001133639.2	LOC732435	XP_001133639.2	ILMN_3224787	0001980215	A	90	ATAATGTACCTATGGTGAACAAGTTGTTGCAACTGGAGCTCAATGATGAA					PREDICTED: Homo sapiens similar to hCG2041198 (LOC732435), mRNA.					
Homo sapiens	RefSeq	NM_012304.3	ILMN_12376	FBXL7	NM_012304.3	NM_012304.3		23194	21071079	NM_012304.3	FBXL7	NP_036436.1	ILMN_1705035	0006980056	S	4316	CTCCCTTGGGGTGGGAATCTATGATGGAGGTTACTGGGGAAACAGCTCAG	5	+	15939046-15939095	5p15.1c	Homo sapiens F-box and leucine-rich repeat protein 7 (FBXL7), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15070733] [evidence IPI]	FBL7; FBL6	FBL7; FBL6
Homo sapiens	RefSeq	XM_001724848.1	ILMN_344301	LOC730029	XM_001724848.1	XM_001724848.1		730029	169161802	XM_001724848.1	LOC730029	XP_001724900.1	ILMN_3225784	0002450301	A	744	AGGAATTTCAGGGTGAATGGACTGCTCCAGCTCCTGAGTTCACTGCTACT				1p21.1d	PREDICTED: Homo sapiens similar to hCG1997137, transcript variant 3 (LOC730029), mRNA.					
Homo sapiens	RefSeq	XM_001132513.2	ILMN_176563	LOC730121	XM_001132513.2	XM_001132513.2		730121	169207073	XM_001132513.2	LOC730121	XP_001132513.1	ILMN_3227542	0004490022	A	271	TGATTACTAAGAGTATCCACGTGACCTGGACCTGGGTGAGTGGGTCCTAG	14	-	87170704-87170744:87170745-87170748:87171503-87171507	14q31.3c	PREDICTED: Homo sapiens hypothetical LOC730121 (LOC730121), mRNA.					
Homo sapiens	RefSeq	NM_001004746.1	ILMN_169850	OR5T2	NM_001004746.1	NM_001004746.1		219464	52317141	NM_001004746.1	OR5T2	NP_001004746.1	ILMN_2079602	0006510521	S	524	TGTCACCCAGAGTCTACATGCCACTCATCAATGCTTCCTATGTTGCTGGC	11	-	56000088-56000137	11q11c	Homo sapiens olfactory receptor, family 5, subfamily T, member 2 (OR5T2), mRNA.				OR11-177	OR11-177
Homo sapiens	RefSeq	NM_152542.2	ILMN_3259	PPM1K	NM_152542.2	NM_152542.2		152926	31542532	NM_152542.2	PPM1K	NP_689755.2	ILMN_2070043	0005870189	S	1919	GCAACCATGCAAAAGAAATTAATTTGGCCAGGCACAGTGGCTCATGCCTG	4	-	89402170-89402219	4q22.1b	Homo sapiens protein phosphatase 1K (PP2C domain containing) (PPM1K), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	UG0882E07; PP2Cm; DKFZp667B084; PTMP; DKFZp761G058	UG0882E07; PP2Cm; DKFZp667B084; PTMP; DKFZp761G058
Homo sapiens	RefSeq	NM_152542.2	ILMN_3259	PPM1K	NM_152542.2	NM_152542.2		152926	31542532	NM_152542.2	PPM1K	NP_689755.2	ILMN_2070044	0007160593	S	1201	GATCCCAACGAAGCAGCCCATGCGGTGACTGAACAGGCAATACAGTACGG	4	-	89402888-89402902:89405177-89405211	4q22.1b	Homo sapiens protein phosphatase 1K (PP2C domain containing) (PPM1K), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	UG0882E07; PP2Cm; DKFZp667B084; PTMP; DKFZp761G058	UG0882E07; PP2Cm; DKFZp667B084; PTMP; DKFZp761G058
Homo sapiens	RefSeq	NM_002524.2	ILMN_3443	NRAS	NM_002524.2	NM_002524.2		4893	6006027	NM_002524.2	NRAS	NP_002515.1	ILMN_1775759	0006020280	S	1649	GGTTTTCCAGAGGCCTGTTTTGGGGCTTTCCCAGGAGAAAGATGAAACTG	1	-	115051363-115051412	1p13.2a	Homo sapiens neuroblastoma RAS viral (v-ras) oncogene homolog (NRAS), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9069260] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7972015] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8493579] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9690470] [evidence EXP]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA) [goid 32228] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of Rac protein signal transduction [goid 35022] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a striated muscle cell; striated muscle fibers are divided by transverse bands into striations, and cardiac and voluntary muscle are types of striated muscle [goid 51146] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	NRAS1; N-ras; ALPS4	NRAS1; N-ras; ALPS4
Homo sapiens	RefSeq	NM_020181.1	ILMN_3873	C14ORF162	NM_020181.2	NM_020181.2		56936	106507211	NM_020181.2	C14orf162	NP_064566.2	ILMN_1775121	0003940360	S	1102	CCTTTTTGTGCCTTTCTTGACCTGGAGGGGGAGGCAGGAGGATTGCTGTC				14q24.1e	Homo sapiens chromosome 14 open reading frame 162 (C14orf162), mRNA.				PLPL	PLPL
Homo sapiens	RefSeq	NM_152684.1	ILMN_2437	FLJ39653	NM_152684.1	NM_152684.1		202020	22749374	NM_152684.1	FLJ39653	NP_689897.1	ILMN_1666633	0003780240	S	1570	CAGGAGCTGGAAGGGTAGGAATCCCAAATTCTGTTGCCTAAGGCAGCCAG	4	+	15838953-15839002	4p15.32d	Homo sapiens hypothetical protein FLJ39653 (FLJ39653), mRNA.					
Homo sapiens	RefSeq	NM_173808.2	ILMN_20523	NEGR1	NM_173808.2	NM_173808.2		257194	66346705	NM_173808.2	NEGR1	NP_776169.2	ILMN_1697804	0002810347	S	5268	GCCAGGCAGAGTGTAATTTCTTAACAGCTGGGTATAAAACAACGGGCACC	1	-	71869743-71869792	1p31.1j-p31.1i	Homo sapiens neuronal growth regulator 1 (NEGR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC46680; KILON; Ntra; DMML2433	MGC46680; KILON; Ntra; DMML2433
Homo sapiens	RefSeq	NM_144978.1	ILMN_24680	CCDC138	NM_144978.1	NM_144978.1		165055	21450664	NM_144978.1	CCDC138	NP_659415.1	ILMN_1767260	0006960189	S	1801	CGTACTTGCTCTGTGCTGCTTCGAGCCCCTAAGCTTGATCTTCAAATACT	2	+	108856386-108856435	2q13a	Homo sapiens coiled-coil domain containing 138 (CCDC138), mRNA.				FLJ32745	FLJ32745
Homo sapiens	RefSeq	NM_004075.2	ILMN_6263	CRY1	NM_004075.2	NM_004075.2		1407	19923246	NM_004075.2	CRY1	NP_004066.1	ILMN_1760593	0001940253	S	2252	TCCATGGGCACTGGTCTCAGTGGTGGGAAACGTCCTAGTCAGGAAGAGGA	12	-	105910740-105910789	12q23.3c	Homo sapiens cryptochrome 1 (photolyase-like) (CRY1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9801304] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 10217146] [evidence TAS]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9801304] [evidence TAS]; Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA [goid 3913] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [pmid 8909283] [evidence TAS]	PHLL1	PHLL1
Homo sapiens	RefSeq	NM_004075.2	ILMN_6263	CRY1	NM_004075.2	NM_004075.2		1407	19923246	NM_004075.2	CRY1	NP_004066.1	ILMN_2202637	0002850059	S	2881	GACCCAAACTTGTGGAAGTATCATGTGTTAAGTTCTCTGTCTCTGTTTCT	12	-	105909326-105909375	12q23.3c	Homo sapiens cryptochrome 1 (photolyase-like) (CRY1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9801304] [evidence TAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 10217146] [evidence TAS]; The covalent or noncovalent linking of a chromophore to a protein [goid 18298] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9801304] [evidence TAS]; Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA [goid 3913] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [pmid 8909283] [evidence TAS]	PHLL1	PHLL1
Homo sapiens	RefSeq	NM_005189.1	ILMN_28525	CBX2	NM_005189.1	NM_005189.1		84733	61743962	NM_005189.1	CBX2	NP_005180.1	ILMN_1770678	0006590278	I	4042	TTGTGTGTTTTTCCTGGTGCTTCAAGAGCGTGTGCAGGGCAAGTGCCGTC	17	+	75375837-75375886	17q25.3d	Homo sapiens chromobox homolog 2 (Pc class homolog, Drosophila) (CBX2), transcript variant 1, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence NAS]	M33; CDCA6; MGC10561	M33; CDCA6; MGC10561
Homo sapiens	RefSeq	NM_006139.1	ILMN_5437	CD28	NM_006139.1	NM_006139.1		940	5453610	NM_006139.1	CD28	NP_006130.1	ILMN_1749362	0004890722	S	3281	CGTGTGCCACTTGCCCAGCTTCTTGGGCACACAGAGTTCTTCAATCCAAG	2	+	204310276-204310325	2q33.2a	Homo sapiens CD28 molecule (CD28), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285224] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11285224] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11390434] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9784967] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [pmid 11390434] [evidence IDA]	Any process that activates or increases the frequency, rate, or extent of an inflammatory response to an antigenic stimulus [goid 2863] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [evidence IEA]; The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation [goid 31295] [evidence IEA]; The process of elimination of immature T cells in the thymus which react strongly with self-antigens [goid 45060] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISS]; An immune response mediated through a body fluid [goid 6959] [pmid 8717514] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9784967] [evidence TAS]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [pmid 8717514] [evidence TAS]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [pmid 9784967] [evidence TAS]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [evidence ISS]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [pmid 3159820] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of viral genome replication [goid 45070] [pmid 7492435] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45086] [pmid 3875683] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 45727] [pmid 12028592] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [pmid 8717514] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [pmid 3159820] [evidence IDA]; Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism [goid 50690] [pmid 11285224] [evidence EXP]	Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 9784967] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 3159820] [evidence NAS]	Tp44; MGC138290	Tp44; MGC138290
Homo sapiens	RefSeq	XM_942678.1	ILMN_162295	PDPR	XM_001134215.1	XM_001134215.1		55066	113426487	XM_001134215.1	PDPR	XP_001134215.1	ILMN_1778013	0000110364	A	4594	GCCCACTGGCCTTGGATCATCTCCTCATGCACACCCGGAGTTTTACCTGC				16q22.1f	PREDICTED: Homo sapiens pyruvate dehydrogenase phosphatase regulatory subunit (PDPR), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [evidence IEA]	Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein [goid 4047] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		
Homo sapiens	RefSeq	NM_017990.3	ILMN_162295	PDPR	XM_001134215.1	XM_001134215.1		55066	113426487	XM_001134215.1	PDPR	XP_001134215.1	ILMN_1667034	0001940167	A	4991	CCTGGCGGAGGAATTTGCGTTGGCTTGCTTTCAGGGGTTAGCTACAAGAT				16q22.1f	PREDICTED: Homo sapiens pyruvate dehydrogenase phosphatase regulatory subunit (PDPR), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [evidence IEA]	Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein [goid 4047] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		FLJ10079; DKFZp686D16130; DKFZp686A088
Homo sapiens	RefSeq	XM_946253.1	ILMN_138030	THOC4	XM_946253.1	XM_946253.1		10189	89043042	XM_946253.1	THOC4	XP_951346.1	ILMN_1688390	0001990537	I	551	CTTCAGCTCCTTCCGGAAGATTCACTTCTGTGAAGCCTTCTCAGAACCGC				17q25.3g	PREDICTED: Homo sapiens THO complex 4, transcript variant 2 (THOC4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15047853] [evidence IPI]		
Homo sapiens	RefSeq	XM_943216.1	ILMN_45118	LOC647384	XM_943216.1	XM_943216.1		647384	88944436	XM_943216.1	LOC647384	XP_948309.1	ILMN_1686702	0004260427	I	141	TTTCTTTGCCCTCATTTTTCCATTAGAACAACGCTACTTCGATGAAGTTC					PREDICTED: Homo sapiens similar to cell division cycle 2-like 2 isoform 3, transcript variant 2 (LOC647384), mRNA.					
Homo sapiens	RefSeq	NM_002170.2	ILMN_13362	IFNA8	NM_002170.2	NM_002170.2		3445	42476082	NM_002170.2	IFNA8	NP_002161.2	ILMN_1678574	0001050491	S	1043	GGAAGTGGTGCACTTGCAAACAAGCTCTACTATCCCTGAGGAAATACCAG				9p21.3c	Homo sapiens interferon, alpha 8 (IFNA8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	 [goid 5126] [pmid 6163083] [evidence TAS]		
Homo sapiens	RefSeq	NM_007223.1	ILMN_795	GPR176	NM_007223.1	NM_007223.1		11245	6005771	NM_007223.1	GPR176	NP_009154.1	ILMN_1748890	0001990484	S	2655	CTGTGGGGACAAGAGCTGGGCAGTTTTGAATGGGTCTTGAGGTGGGTACC	15	-	40093042-40093091	15q14d-q15.1a	Homo sapiens G protein-coupled receptor 176 (GPR176), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7893747] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7893747] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 7893747] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	Gm1012; GPR	Gm1012; GPR
Homo sapiens	RefSeq	NM_017527.2	ILMN_19724	LY6K	NM_017527.2	NM_017527.2		54742	40068041	NM_017527.2	LY6K	NP_059997.2	ILMN_1738646	0001340390	S	1414	GTGGAGGCGCTGTGGATGGCTGCTTTTCCTCAACCTTTCCTACCAGATTC	8	+	143782292-143782341	8q24.3e	Homo sapiens lymphocyte antigen 6 complex, locus K (LY6K), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			FLJ35226; HSJ001348	FLJ35226; HSJ001348
Homo sapiens	RefSeq	NM_000159.2	ILMN_15969	GCDH	NM_000159.2	NM_000159.2		2639	50959149	NM_000159.2	GCDH	NP_000150.1	ILMN_2296843	0006660201	I	1473	TGAGCTTAGAAAGGGAGGTGGCGGATGGAGTGGGAAGTGAGAGACACTGA	19	+	12871434-12871483	19p13.13c	Homo sapiens glutaryl-Coenzyme A dehydrogenase (GCDH), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8541831] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: glutaryl-CoA + acceptor = crotonoyl-CoA + CO2 + reduced acceptor [goid 4361] [pmid 8541831] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	GCD; ACAD5	GCD; ACAD5
Homo sapiens	RefSeq	NM_181720.2	ILMN_15838	ARHGAP30	NM_181720.2	NM_181720.2		257106	71040095	NM_181720.2	ARHGAP30	NP_859071.2	ILMN_2408851	0004390441	A	3252	CTTGTTCCCAGGGAGTGGGTCATTGGCCAAAGGGAACATAAGGTAGGCAG	1	-	161017222-161017271	1q23.3a	Homo sapiens Rho GTPase activating protein 30 (ARHGAP30), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	FLJ00267; FLJ44128; RP11-544M22.6	FLJ00267; FLJ44128; RP11-544M22.6
Homo sapiens	RefSeq	NM_013386.2	ILMN_183710	SLC25A24	NM_013386.3	NM_013386.3		29957	148491090	NM_013386.3	SLC25A24	NP_037518.3	ILMN_1752639	0007510681	A	1349	GATTCTGTAAACCCTGGAGTCATGGTGTTGCTGGGATGCGGTGCCTTATC	1	-	108681744-108681793	1p13.3c	Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 (SLC25A24), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp586G0123; APC1; SCAMC-1	DKFZp586G0123; APC1; SCAMC-1
Homo sapiens	RefSeq	NM_013386.2	ILMN_183710	SLC25A24	NM_013386.3	NM_013386.3		29957	148491090	NM_013386.3	SLC25A24	NP_037518.3	ILMN_1711838	0003890402	I	344	CTGCAGGAGGGGCTCAGGAACCTGGGCATCCCTCTGGGCCAGGACGCCGA	1	-	108742581-108742630	1p13.3c	Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 (SLC25A24), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp586G0123; APC1; SCAMC-1	DKFZp586G0123; APC1; SCAMC-1
Homo sapiens	RefSeq	XM_929146.1	ILMN_35748	LOC646190	XM_929146.1	XM_929146.1		646190	88976757	XM_929146.1	LOC646190	XP_934239.1	ILMN_1789044	0004040470	S	239	TCCTGAAGTTGCCGGGTTCTGATCTCCGCGACTACGAGCCACCGGAGAGA	4	+	133116408-133116457		PREDICTED: Homo sapiens hypothetical protein LOC646190 (LOC646190), mRNA.					
Homo sapiens	RefSeq	NM_145256.2	ILMN_171359	LRRC25	NM_145256.2	NM_145256.2		126364	45593137	NM_145256.2	LRRC25	NP_660299.2	ILMN_2150196	0005310397	S	2335	GATCTCCAGGCTTGGCCTCCAGAGCAGCCCACACCAACCCCAAAATAAAA	19	-	18501972-18502021	19p13.11c	Homo sapiens leucine rich repeat containing 25 (LRRC25), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MAPA; FLJ38116	MAPA; FLJ38116
Homo sapiens	RefSeq	XM_001129814.2	ILMN_180898	LOC729272	XM_001129814.2	XM_001129814.2		729272	169208346	XM_001129814.2	LOC729272	XP_001129814.2	ILMN_3240398	0004640603	S	2	TGGTAGTACTAACATACATTGAGGAGTTAACAAAGGAGAGGGACGCCCTG	15	-	137724-137760:138352-138364		PREDICTED: Homo sapiens hypothetical LOC729272 (LOC729272), mRNA.					
Homo sapiens	RefSeq	NM_001010909.1	ILMN_1113	C6ORF205	NM_001010909.1	NM_001010909.1		394263	58219025	NM_001010909.1	C6orf205	NP_001010909.1	ILMN_1700978	0006420689	S	3442	CCTCTCACAAAGATGCTTATCTAACCTCCCCAGCAGTCATGGGTTTCAGC	6	+	31065450-31065499	6p21.33a	Homo sapiens chromosome 6 open reading frame 205 (C6orf205), mRNA.				MGC125609; bCX31G15.2; KMQK697	MGC125609; bCX31G15.2; KMQK697
Homo sapiens	RefSeq	NM_024007.2	ILMN_27934	EBF1	NM_024007.2	NM_024007.2		1879	36054140	NM_024007.2	EBF1	NP_076870.1	ILMN_1778681	0001110592	S	2230	GAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG	5	-	158058476-158058525	5q33.3c	Homo sapiens early B-cell factor 1 (EBF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14594818] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EBF; O/E-1; COE1; OLF1	EBF; O/E-1; COE1; OLF1
Homo sapiens	RefSeq	NR_001286.1	ILMN_3405	LOC260339	NR_001286.1	NR_001286.1		260339	29150257	NR_001286.1	LOC260339		ILMN_1692258	0006130315	S	2166	CCAGAGTGTTCTGTGATATAATTTTGTGTTCTTCACAAGCAGGCAGAGGC	6	-	121840668-121840717	6q22.31c	Homo sapiens processed pseudogene mtTFA 3 (LOC260339) on chromosome 6.					
Homo sapiens	RefSeq	NR_001286.1	ILMN_3405	LOC260339	NR_001286.1	NR_001286.1		260339	29150257	NR_001286.1	LOC260339		ILMN_2096442	0001660739	S	2536	TGAGCCCCCTGAGTAGCTGGGATTATAGGCGCCCGTCACCATGCCCGGTT	6	-	121840298-121840347	6q22.31c	Homo sapiens processed pseudogene mtTFA 3 (LOC260339) on chromosome 6.					
Homo sapiens	RefSeq	NM_016128.3	ILMN_15399	COPG	NM_016128.3	NM_016128.3		22820	35250828	NM_016128.3	COPG	NP_057212.1	ILMN_1708204	0006510037	S	2726	GAGGCCAGCCTGCATAGGACCTCATACCCTTCCCCAACACTACCTGGAAG	3	+	128996268-128996317	3q21.3c	Homo sapiens coatomer protein complex, subunit gamma (COPG), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8599108] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8533093] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11031247] [evidence EXP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat [goid 48205] [pmid 16956762] [evidence EXP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	COPG1; FLJ21068	COPG1; FLJ21068
Homo sapiens	Unigene	Hs.561747	ILMN_115058	HS.561747	Hs.561747		Hs.561747		24124017	BU935198			ILMN_1894072	0003370037	S	520	CAGATGTTGTAGACCTAGCCCCACAGGACTGCATTTAGCTGCTTCAGTGA	7	+	106336182-106336231		AGENCOURT_10520654 NIH_MGC_128 Homo sapiens cDNA clone IMAGE:6702588 5, mRNA sequence					
Homo sapiens	RefSeq	XM_931859.1	ILMN_33760	DDX12	XM_931859.1	XM_931859.1		440081	89035314	XM_931859.1	DDX12	XP_936952.1	ILMN_1710426	0000650196	I	1610	CCAGTCCCTGACTACAGAGGATTTCCCCAAAGTCCCTGGCTGTGAGGTTC	12	-	9464212-9464261	12p13.31a	PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 9 (DDX12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]		
Homo sapiens	RefSeq	NM_005698.2	ILMN_166813	SCAMP3	NM_005698.2	NM_005698.2		10067	16445418	NM_005698.2	SCAMP3	NP_005689.2	ILMN_2399208	0001980082	A	1235	GTGCGAACCGCAGCTGCCAATGCAGCCGCTGGGGCTGCTGAAAATGCCTT	1	-	155226076-155226125	1q22a	Homo sapiens secretory carrier membrane protein 3 (SCAMP3), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles [goid 6892] [pmid 9378760] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		C1orf3	C1orf3
Homo sapiens	RefSeq	NM_030802.2	ILMN_164633	FAM117A	NM_030802.2	NM_030802.2		81558	31543088	NM_030802.2	FAM117A	NP_110429.1	ILMN_1745533	0001400259	S	1907	GGAGCTGACCAAAGCAGCCCTAACGGGCCATAACACTTGACCAATTCAGC	17	-	45143090-45143139	17q21.33a	Homo sapiens family with sequence similarity 117, member A (FAM117A), mRNA.					
Homo sapiens	RefSeq	XM_928999.1	ILMN_36807	LOC646038	XM_928999.1	XM_928999.1		646038	89041756	XM_928999.1	LOC646038	XP_934092.1	ILMN_1715525	0003390278	S	1397	ACCTATGGTTGGAAGTGTTGTGCTGTCAGCCCCATTCCCCATCCTCTGGG	17	+	60277349-60277398		PREDICTED: Homo sapiens similar to ADP-ribosylation factor 7 (LOC646038), mRNA.					
Homo sapiens	RefSeq	NM_213611.1	ILMN_23610	SLC25A3	NM_002635.2	NM_002635.2		5250	47132592	NM_002635.2	SLC25A3	NP_002626.1	ILMN_1782890	0003290398	A	1127	AGGTCTACTTCAGACTTCCTCGCCCTCCTCCACCCGAGATGCCAGAGTCT	12	+	97519358-97519407	12q23.1c	Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 (SLC25A3), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8168843] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 8144629] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8144629] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 8168843] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 1777677] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8144629] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphate (cyt) + H+ (cyt) = phosphate (mitochondrion) + H+ (mitochondrion) [goid 15320] [pmid 8144629] [evidence TAS]	OK/SW-cl.48; PHC	OK/SW-cl.48; PHC
Homo sapiens	RefSeq	NM_002635.2	ILMN_23610	SLC25A3	NM_002635.2	NM_002635.2		5250	47132592	NM_002635.2	SLC25A3	NP_002626.1	ILMN_2332713	0004040224	A	862	GTGGTTCCTAAGCCCCGCAGTGAATGTTCAAAGCCAGAGCAGCTGGTTGT	12	+	97517964-97518013	12q23.1c	Homo sapiens solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 (SLC25A3), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8168843] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 8144629] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8144629] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 8168843] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 1777677] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8144629] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: phosphate (cyt) + H+ (cyt) = phosphate (mitochondrion) + H+ (mitochondrion) [goid 15320] [pmid 8144629] [evidence TAS]	OK/SW-cl.48; PHC	OK/SW-cl.48; PHC
Homo sapiens	Unigene	Hs.537103	ILMN_103191	HS.537103	Hs.537103		Hs.537103		51664932	CR740468			ILMN_1890710	0000450685	S	215	TGTCCTCCCAGTGTTCGACACATAGTAGGTGCTCAATAAATATCTACTAG					CR740468 Soares_testis_NHT Homo sapiens cDNA clone IMAGp971H06104 ; IMAGE:1309473 5, mRNA sequence					
Homo sapiens	RefSeq	NM_006076.3	ILMN_28557	AGFG2	NM_006076.4	NM_006076.4		3268	91984780	NM_006076.4	AGFG2	NP_006067.3	ILMN_1703228	0004050368	S	1957	GATGAGGCACAGTGTTGATGGGGCAGTGACCAGACAGTCCTGAGACCCAG	7	+	100000925-100000974	7q22.1c	Homo sapiens ArfGAP with FG repeats 2 (AGFG2), mRNA.				RABR	RABR
Homo sapiens	RefSeq	XM_499461.2	ILMN_28557	AGFG2	NM_006076.4	NM_006076.4		3268	91984780	NM_006076.4	AGFG2	NP_006067.3	ILMN_1652023	0005550538	S	3681	CCCCTCCAGCCCACAAGGACTCCAGCCTGCTGGCTGGTGAGAGCTGGATG	7	+	100002649-100002698	7q22.1c	Homo sapiens ArfGAP with FG repeats 2 (AGFG2), mRNA.				RABR	
Homo sapiens	RefSeq	NM_201590.1	ILMN_18704	CACNB2	NM_201590.2	NM_201590.2		783	148226484	NM_201590.2	CACNB2	NP_963884.2	ILMN_1683107	0005270411	I	187	GCTCCTGTGAAGAAAATTCCTGCTGGAGTGCTGGGCGCACTTGGAATTGG	10	+	18629800-18629849	10p12.33b	Homo sapiens calcium channel, voltage-dependent, beta 2 subunit (CACNB2), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9594024] [evidence NAS]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 9254841] [evidence TAS]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence NAS]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [pmid 8494331] [evidence TAS]	Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 9254841] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CACNLB2; MYSB; FLJ23743	CACNLB2; MYSB; FLJ23743
Homo sapiens	RefSeq	NM_021167.2	ILMN_183029	GATAD1	NM_021167.3	NM_021167.3		57798	88759345	NM_021167.3	GATAD1	NP_066990.3	ILMN_1710863	0001770360	S	3044	AGGGAGCAACACGTAAAATGGGAGAGGAGTGGGGTGTACTCACTTGCCTC	7	+	91925767-91925816	7q21.2b	Homo sapiens GATA zinc finger domain containing 1 (GATAD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ40695; FLJ22489; ODAG; RG083M05.2	FLJ22489; ODAG; RG083M05.2
Homo sapiens	RefSeq	NM_022070.3	ILMN_10346	HEATR6	NM_022070.4	NM_022070.4		63897	109715834	NM_022070.4	HEATR6	NP_071353.4	ILMN_1791106	0002000220	S	3754	GTCAGGGTTGTTGGAACATCTGACCTGTGCATCCAGGAGCCGAGGAGTCA	17	-	58120683-58120732	17q23.1a	Homo sapiens HEAT repeat containing 6 (HEATR6), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZp686D22141; ABC1; MGC148096; FLJ22087	DKFZp686D22141; FLJ22087
Homo sapiens	RefSeq	NM_182961.1	ILMN_29099	SYNE1	NM_182961.2	NM_182961.2		23345	154277115	NM_182961.2	SYNE1	NP_892006.2	ILMN_1785427	0005550711	I	12383	CAACAGTGAGCTCCAAGAGGTCGAAAAGTGGCTGCTGCAGATGTCTGGCA	6	-	152762460-152762509	6q25.1c-q25.2a	Homo sapiens spectrin repeat containing, nuclear envelope 1 (SYNE1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 11792814] [evidence IDA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12808039] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11792814] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [pmid 10878022] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [pmid 11792814] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [pmid 12808039] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a muscle cell [goid 42692] [pmid 11792814] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 12408964] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [pmid 11801724] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	MYNE1; KIAA1756; dJ398G3.1; 8B; CPG2; KIAA0796; DKFZp781J13156; RP3-398G3.1; RP11-809I23.2; nesprin-1; FLJ30878; SCAR8; dJ398G3.2; KIAA1262; FLJ41140	MYNE1; dJ398G3.1; KIAA1756; 8B; CPG2; KIAA0796; DKFZp781J13156; RP11-809I23.2; RP3-398G3.1; nesprin-1; FLJ30878; SYNE-1; SYNE-1B; dJ398G3.2; MYNE-1; KIAA1262
Homo sapiens	RefSeq	NM_020396.2	ILMN_13473	BCL2L10	NM_020396.2	NM_020396.2		10017	20336328	NM_020396.2	BCL2L10	NP_065129.1	ILMN_1749096	0001110576	S	531	GCGGCTGGGATGGCTTTTGTCACTTCTTCAGGACCCCCTTTCCACTGGCT	15	-	52402128-52402170:52404435-52404441	15q21.2c	Homo sapiens BCL2-like 10 (apoptosis facilitator) (BCL2L10), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9878060] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11278245] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11278245] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11278245] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 9829980] [evidence TAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9878060] [evidence TAS]; Generation of the female gamete; specialised haploid cells produced by meiosis and along with a male gamete takes part in sexual reproduction [goid 7292] [pmid 9878060] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11278245] [evidence IPI]	MGC129810; BCL-B; MGC129811; Diva; Boo	MGC129810; Diva; BCL-B; MGC129811; Boo
Homo sapiens	RefSeq	XM_943003.1	ILMN_42643	LOC647474	XM_943003.1	XM_943003.1		647474	89061094	XM_943003.1	LOC647474	XP_948096.1	ILMN_1703369	0000610474	I	42	TAAAACCACCGCCCGGTCGCCCCCAGCCCAACTCCGGCCGTCGGCTGTCG					PREDICTED: Homo sapiens similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 2 (LOC647474), mRNA.					
Homo sapiens	RefSeq	XM_943003.1	ILMN_42643	LOC647474	XM_943003.1	XM_943003.1		647474	89061094	XM_943003.1	LOC647474	XP_948096.1	ILMN_1658067	0003930079	A	376	AGGATTCTGTAAAGCCCGGTGCCCATCTAACAGTGAAGAAAATTTTTGTT					PREDICTED: Homo sapiens similar to heterogeneous nuclear ribonucleoprotein A3, transcript variant 2 (LOC647474), mRNA.					
Homo sapiens	RefSeq	NM_015058.1	ILMN_162319	KIAA0564	NM_015058.1	NM_015058.1		23078	57863270	NM_015058.1	KIAA0564	NP_055873.1	ILMN_1688455	0005860369	I	6901	CTCCTCTTCACGATTGATAGCAAAATCAGAAACGTTAGGGCACCAGTGAG	13	-	42141170-42141219	13q14.11b-q14.11c	Homo sapiens KIAA0564 (KIAA0564), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	FLJ21779	FLJ21779
Homo sapiens	RefSeq	NM_001009814.1	ILMN_162319	KIAA0564	NM_015058.1	NM_015058.1		23078	57863270	NM_015058.1	KIAA0564	NP_055873.1	ILMN_1808260	0005670470	A	2929	GAAGCTTGTGGCTGCCTTTGGAGAGCTGAGGAGTTTGGCTGACCAAGGGA	13	-	42295561-42295610	13q14.11b-q14.11c	Homo sapiens KIAA0564 (KIAA0564), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	FLJ21779	FLJ21779
Homo sapiens	RefSeq	NM_147198.2	ILMN_25118	WFDC9	NM_147198.2	NM_147198.2		259240	23238189	NM_147198.2	WFDC9	NP_671731.1	ILMN_1677734	0000730039	S	482	CCCCTAGATTCTATTGGCCGATCACTACTGTGGGCTGAAGGATGACCATC	20	-	44236705-44236748:44236749-44236754	20q13.12b	Homo sapiens WAP four-disulfide core domain 9 (WFDC9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC126705; dJ688G8.2; WAP9; MGC126701	MGC126705; dJ688G8.2; WAP9; MGC126701
Homo sapiens	RefSeq	NM_001042450.1	ILMN_173030	SLC5A10	NM_001042450.1	NM_001042450.1		125206	109659835	NM_001042450.1	SLC5A10	NP_001035915.1	ILMN_2412849	0007560465	A	1964	GGCCAAGCCAGCAAAGCGGGAGCCCTGAAAAATTAGGGGGGAAATGGGAG	17	+	18863874-18863923	17p11.2e	Homo sapiens solute carrier family 5 (sodium/glucose cotransporter), member 10 (SLC5A10), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	FLJ25217; SGLT5	FLJ25217; SGLT5
Homo sapiens	RefSeq	NM_152997.2	ILMN_27804	C4ORF7	NM_152997.2	NM_152997.2		260436	50428928	NM_152997.2	C4orf7	NP_694542.1	ILMN_1725276	0006100241	S	113	GCCATCTTGGCAGTGGCTGTTGGTTTCCCAGTCTCTCAAGACCAGGAACG	4	+	71096939-71096968:71098711-71098730	4q13.3a	Homo sapiens chromosome 4 open reading frame 7 (C4orf7), mRNA.				FDC-SP; MGC71894	FDC-SP; MGC71894
Homo sapiens	RefSeq	XR_017586.2	ILMN_176491	LOC644988	XR_017586.2	XR_017586.2		644988	169210845	XR_017586.2	LOC644988		ILMN_3201485	0000050646	A	979	CCCTGACACCAAGACGACCTACTGCTTCGACGCCTTCCCTAACATCGAGA	17	+	20687800-20687841:20687941-20687948	17p11.2c	PREDICTED: Homo sapiens misc_RNA (LOC644988), miscRNA.					
Homo sapiens	RefSeq	NM_001013692.1	ILMN_34822	LOC653606	XM_928378.2	XM_928378.2		653606	113403409	XM_928378.2	LOC653606	XP_933471.2	ILMN_1771291	0001050739	S	2075	ATTTAGGTTCATCTGCAGGAAATAAAGGAATCAAAATAAACTTCATTTTG	1	+	12961549-12961598	1p36.21d	PREDICTED: Homo sapiens similar to PRAME family member 3 (LOC653606), mRNA.					
Homo sapiens	RefSeq	XM_937221.1	ILMN_40206	LOC648176	XM_937221.1	XM_937221.1		648176	89035899	XM_937221.1	LOC648176	XP_942314.1	ILMN_1693293	0002850243	S	2829	CCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGG					PREDICTED: Homo sapiens similar to RAS and EF hand domain containing (LOC648176), mRNA.					
Homo sapiens	RefSeq	NM_033172.1	ILMN_8465	B3GALT5	NM_033172.1	NM_033172.1		10317	15451884	NM_033172.1	B3GALT5	NP_149362.1	ILMN_2378654	0000150377	A	2060	ACTGCATTCTGACCTGCTGTACAGACTGCCCACACTGCTGACCTGCCTAG	21	+	39956034-39956083	21q22.2b	Homo sapiens UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 (B3GALT5), transcript variant 4, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16780588] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 16780588] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 10212226] [evidence TAS]	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [pmid 10212226] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	B3GalTx; GLCT5; beta3Gal-T5; B3GalT-V; B3T5	B3GalT-V; B3GalTx; GLCT5; beta3Gal-T5; B3T5
Homo sapiens	RefSeq	NM_147188.1	ILMN_165257	FBXO22	NM_147188.1	NM_147188.1		26263	22547148	NM_147188.1	FBXO22	NP_671717.1	ILMN_1701869	0002350520	I	2442	GTGGATCTGGTAGTGAGCCATCTTGGACCCTGAAGAGGAGGCAACACACC	15	+	74013623-74013672	15q24.2a	Homo sapiens F-box protein 22 (FBXO22), transcript variant 1, mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10531035] [evidence TAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531037] [evidence TAS]	MGC31799; FBX22; FLJ13986	MGC31799; FBX22; FLJ13986
Homo sapiens	Unigene	Hs.521310	ILMN_99921	HS.521310	Hs.521310		Hs.521310		6506021	AW206525			ILMN_1862270	0006040093	S	227	CCCTGGCTCAAGAAATTGCAAACCGTGGCCACTAAAAGGCCAGAGAGCGC	10	+	3017143-3017192		UI-H-BI1-aez-f-02-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2721147 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000903.2	ILMN_178075	NQO1	NM_000903.2	NM_000903.2		1728	70995356	NM_000903.2	NQO1	NP_000894.1	ILMN_2354953	0000780452	A	2295	ACTGCCCTCTTGTGGTGCATTGAAAGAAGAGATGAGAAATGATGAAAAGG	16	-	69743550-69743599	16q22.1e	Homo sapiens NAD(P)H dehydrogenase, quinone 1 (NQO1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 2843525] [evidence TAS]	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [pmid 10393963] [evidence TAS]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [pmid 9579781] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [pmid 9579781] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 10393963] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)(+) + a hydroquinone [goid 3955] [pmid 10393963] [evidence TAS]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [pmid 9579781] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	NMOR1; NMORI; DHQU; DIA4; DTD; QR1	NMOR1; NMORI; DHQU; DIA4; DTD; QR1
Homo sapiens	RefSeq	NM_001012713.1	ILMN_6248	C10ORF31	NM_001012713.1	NM_001012713.1		414196	60593047	NM_001012713.1	C10orf31	NP_001012731.1	ILMN_1768339	0001400220	S	1394	GCTATTTAGACAAGGAAGGCTGGAAGCAAGTGACAGGTGCGGCAGTGCGC	10	-	11399827-11399876	10p14a	Homo sapiens chromosome 10 open reading frame 31 (C10orf31), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			FLJ40494	FLJ40494
Homo sapiens	RefSeq	XM_928521.1	ILMN_46064	C9ORF31	XM_928521.1	XM_928521.1		57000	89029988	XM_928521.1	C9orf31	XP_933614.1	ILMN_1750173	0006980086	S	4466	ACCAGGGTTTCCGGTTCGCTCACCCTGTTCCCTGATCTGCTCCAGATGAA	9	-	123083120-123083169	9q33.2a	PREDICTED: Homo sapiens chromosome 9 open reading frame 31 (C9orf31), mRNA.					
Homo sapiens	RefSeq	NM_145114.1	ILMN_19642	MAX	NM_145114.1	NM_145114.1		4149	21704266	NM_145114.1	MAX	NP_660089.1	ILMN_1802457	0002680577	I	612	TGGGTCTGTGCTGACTCTGGCCTTACAACCTTCCAGCCTCCTTTGCTGGC	14	-	65550697-65550746	14q23.3a	Homo sapiens MYC associated factor X (MAX), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8425218] [evidence TAS]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2006410] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2006410] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418410] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17157259] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418410] [evidence IPI]	MGC34679; MGC36767; MGC11225; MGC10775; orf1; MGC18164	MGC34679; MGC36767; MGC11225; MGC10775; orf1; MGC18164
Homo sapiens	RefSeq	NM_019049.1	ILMN_2058	C1ORF218	NM_019049.1	NM_019049.1		54530	9506654	NM_019049.1	C1orf218	NP_061922.1	ILMN_1789436	0004860575	S	1936	AACGAGTTTTCAGTCTCTCTGTATGCCTTTGCTATTTAGGGGTCCACCCC	1	-	195745406-195745455	1q31.3c	Homo sapiens chromosome 1 open reading frame 218 (C1orf218), mRNA.				FLJ20054; DKFZp547O0715	FLJ20054; DKFZp547O0715
Homo sapiens	RefSeq	NM_145259.1	ILMN_11457	ACVR1C	NM_145259.1	NM_145259.1		130399	21687097	NM_145259.1	ACVR1C	NP_660302.1	ILMN_1689217	0000450064	S	2882	CCAAACCCTACAGACGGTATCAGAAACAGCAAATAGATATTCCTCTACCC	2	-	158097469-158097518	2q24.1d	Homo sapiens activin A receptor, type IC (ACVR1C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that acts as an activin receptor. Heterodimeric activin receptors, comprising one Type I activin receptor and one Type II receptor polypeptide, and heterotrimeric receptors have been observed [goid 48179] [pmid 15531507] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12063393] [evidence IC ]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 15531507] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 15531507] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12063393] [evidence IC ]; Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals [goid 16361] [pmid 12063393] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	ACVRLK7; ALK7	ACVRLK7; ALK7
Homo sapiens	RefSeq	XM_001716778.1	ILMN_348310	LOC100128317	XM_001716778.1	XM_001716778.1		100128317	169171834	XM_001716778.1	LOC100128317	XP_001716830.1	ILMN_3191971	0001300100	A	1	ATGTCTATGGGCAGTAAACTAAAATGTGAACATGATACAAATGGCAAGGT				7q21.11c	PREDICTED: Homo sapiens similar to hCG2036731 (LOC100128317), mRNA.					
Homo sapiens	RefSeq	XM_372573.1	ILMN_7372	LOC390594	XM_372573.1	XM_372573.1		390594	41205051	XM_372573.1	LOC390594	XP_372573.1	ILMN_1681308	0003990110	S	243	CGTGGAGTGCGCCGCCTTCCTCCAGGCGCCGGCGCTGGCTCGCTTTCTGG	15	+	63156449-63156498	15q22.31b	PREDICTED: Homo sapiens similar to Kelch domain-containing protein 5 (LOC390594), mRNA.					
Homo sapiens	RefSeq	XR_017256.2	ILMN_165695	LOC340274	XR_017256.2	XR_017256.2		340274	169170865	XR_017256.2	LOC340274		ILMN_3198918	0001240121	A	110	ACATTGGCCAGAAGGAAGACTTCGAGGAAGCAAGGAAGAAGGCACCAAAG	7	-	21227413-21227462	7p15.3d	PREDICTED: Homo sapiens misc_RNA (LOC340274), miscRNA.					
Homo sapiens	RefSeq	XR_017256.2	ILMN_165695	LOC340274	XR_017256.2	XR_017256.2		340274	169170865	XR_017256.2	LOC340274		ILMN_3275388	0001070121	M	1	ATGTCCAGCAAAGGCTCAGTGGTTCTGGCCTACAGTGGCGGTCTGGACAC	7	-	21227522-21227571	7p15.3d	PREDICTED: Homo sapiens misc_RNA (LOC340274), miscRNA.					
Homo sapiens	RefSeq	XM_925786.1	ILMN_14362	C6ORF35	NM_018452.3	NM_018452.3		729515	146134503	NM_018452.3	C6orf35	NP_060922.2	ILMN_1730629	0006180703	S	148	CCGGACCCTTCTTCAGATTGCACAGGAGGAGGCGGTAGCGGAACCTTTCT	6	-	157665300-157665349	6q25.3c	Homo sapiens chromosome 6 open reading frame 35 (C6orf35), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ10029; MGC34308; BM033	
Homo sapiens	RefSeq	NM_018452.2	ILMN_14362	C6ORF35	NM_018452.3	NM_018452.3		729515	146134503	NM_018452.3	C6orf35	NP_060922.2	ILMN_1682444	0003140121	S	2775	GGAGGCTGGCAGGGACAAATTCCCTAAAAGAGGGACCAAGCGTCAGCTCC				6q25.3c	Homo sapiens chromosome 6 open reading frame 35 (C6orf35), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ10029; MGC34308; BM033	BM033
Homo sapiens	RefSeq	NM_005103.3	ILMN_28992	FEZ1	NM_005103.3	NM_005103.3		9638	17105402	NM_005103.3	FEZ1	NP_005094.1	ILMN_1779071	0003290458	I	1461	GAGCAAGCGCGCGGGGTCCTTTGCCGTTGGCTTCTAGTGCTAGTAATCAT	11	-	125315811-125315860	11q24.2b	Homo sapiens fasciculation and elongation protein zeta 1 (zygin I) (FEZ1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9096408] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9096408] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 9096408] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14690447] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with the microtubule constituent protein gamma-tubulin [goid 43015] [evidence IEA]		
Homo sapiens	RefSeq	NM_030790.2	ILMN_10328	ITFG1	NM_030790.3	NM_030790.3		81533	141803256	NM_030790.3	ITFG1	NP_110417.2	ILMN_1693310	0004670019	S	1684	AGCTAATTGTCATTCCATACCCTCACAATGTCCCTCGAAGTTGGAGTGCC	16	-	47192891-47192901:47195661-47195699	16q12.1a	Homo sapiens integrin alpha FG-GAP repeat containing 1 (ITFG1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDA08; TIP	TIP
Homo sapiens	Unigene	Hs.570034	ILMN_122215	HS.570034	Hs.570034		Hs.570034		47301926	CN285512			ILMN_1820146	0004730228	S	370	CGATCTCTCCCCAGTCCAGGAATCCAGCTCCAGCTGAAGGGGTCTGAGAT	19	-	60703011-60703060		17000531958267 GRN_EB Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001951.2	ILMN_17249	E2F5	NM_001951.3	NM_001951.3		1875	134142810	NM_001951.3	E2F5	NP_001942.2	ILMN_1782551	0006650196	S	960	CTTCTGACGTGTTTCCTCTCTTAAGGCTTTCTCCTACCCCGGCAGATGAC	8	+	86124431-86124439:86125988-86126028	8q21.2b	Homo sapiens E2F transcription factor 5, p130-binding (E2F5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9190208] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7892279] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7760804] [evidence TAS]	E2F-5	E2F-5
Homo sapiens	RefSeq	NM_002152.2	ILMN_165752	HRC	NM_002152.2	NM_002152.2		3270	75905816	NM_002152.2	HRC	NP_002143.1	ILMN_1738773	0001580037	S	2161	CTGTCAGTTCTGCTATCTCTGCCCGCTGGTCTGCGAAACGGTCTGCGCTC	19	-	54347075-54347124	19q13.33a	Homo sapiens histidine rich calcium binding protein (HRC), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The volume enclosed by the membranes of the sarcoplasmic reticulum [goid 33018] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 2037293] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 2037293] [evidence TAS]	MGC133236	MGC133236
Homo sapiens	RefSeq	NM_001080494.1	ILMN_181449	TTC39A	NM_001080494.1	NM_001080494.1		22996	122937435	NM_001080494.1	TTC39A	NP_001073963.1	ILMN_2297570	0004920373	I	92	GGCAGCAGAGCCCAATGGGCCAGAAGGGCCACAAAGACTCCCTTTACCCT	1	-	51560385-51560421:51560422-51560434	1p32.3e	Homo sapiens tetratricopeptide repeat domain 39A (TTC39A), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0452; DEME-6	KIAA0452; DEME-6
Homo sapiens	Unigene	Hs.578895	ILMN_131076	HS.578895	Hs.578895		Hs.578895		82041342	DB038929			ILMN_1877025	0001340576	S	193	TCTTGACACCCCCTGCTTTTGGGGGGAGCAGTTCTTGACAGACTTCCCAC	16	-	7604555-7604604		DB038929 TESTI2 Homo sapiens cDNA clone TESTI2025323 5, mRNA sequence					
Homo sapiens	RefSeq	NM_004183.1	ILMN_19773	BEST1	NM_004183.2	NM_004183.2		7439	83745147	NM_004183.2	BEST1	NP_004174.1	ILMN_1718982	0005420600	S	1850	AGCACATTCCTAACCTGCTTCCTAATGGGGATGCTTCGCCAGCCAGGTCC	11	+	61488158-61488170:61488171-61488207	11q12.3a	Homo sapiens bestrophin 1 (BEST1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10737974] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 17003041] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10737974] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 11050159] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9662395] [evidence TAS]; The directed movement of chloride ions across an epithelium [goid 30321] [pmid 17003041] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [pmid 17003041] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	BEST; VMD2; TU15B; ARB; BMD	BEST; TU15B; BMD
Homo sapiens	RefSeq	NM_007027.2	ILMN_24939	TOPBP1	NM_007027.2	NM_007027.2		11073	20143948	NM_007027.2	TOPBP1	NP_008958.1	ILMN_1684929	0000870601	S	5086	ACCTCTTTTAACAGGAGCCTGAGCACAAGGTTTAATGAGGAAGCTGGGGC	3	-	134802302-134802351	3q22.1d-q22.1e	Homo sapiens topoisomerase (DNA) II binding protein 1 (TOPBP1), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9461304] [evidence TAS]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 12773567] [evidence IDA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 12773567] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [pmid 12773567] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9461304] [evidence TAS]	TOP2BP1	TOP2BP1
Homo sapiens	RefSeq	XM_928673.1	ILMN_35262	LOC645659	XM_928673.1	XM_928673.1		645659	88976733	XM_928673.1	LOC645659	XP_933766.1	ILMN_1758025	0003840402	S	2490	CAGGCCAAATGCCATTTGATTTTGAACCTTGTAGGTCCCCACTCACCCTC	4	-	123216325-123216374		PREDICTED: Homo sapiens similar to ring finger protein 185 (LOC645659), mRNA.					
Homo sapiens	Unigene	Hs.570838	ILMN_123019	HS.570838	Hs.570838		Hs.570838		21752206	AK093356			ILMN_1870303	0006980592	S	377	GGCCATTGGACCCCTAGAAACCTGTGGCAAGTCCTGGAAGTTTTTCAAGG	4	+	103983901-103983927:103983931-103983953		Homo sapiens cDNA FLJ36037 fis, clone TESTI2017256					
Homo sapiens	RefSeq	NM_023011.2	ILMN_28964	UPF3A	NM_023011.2	NM_023011.2		65110	18375523	NM_023011.2	UPF3A	NP_075387.1	ILMN_1671742	0000070041	I	459	GCCTAGAATATCCTGCAGTGGTAGAGTTTGCTCCATTCCAGAAGATAGCC	13	+	114069879-114069928	13q34d	Homo sapiens UPF3 regulator of nonsense transcripts homolog A (yeast) (UPF3A), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11163187] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11163187] [evidence NAS]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [pmid 11163187] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [pmid 11163187] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	UPF3; RENT3A; HUPF3A	HUPF3A; UPF3; RENT3A
Homo sapiens	RefSeq	NR_031735.1	ILMN_388654	MIR1914	NR_031735.1	NR_031735.1		100302137	269847652	NR_031735.1	MIR1914		ILMN_3308435	0005080609	S	29	TTCTGCTTCCTCTTAGCGCAGGAGGGGTCCCGCACTGGGAGGGGCCCTCA					Homo sapiens microRNA 1914 (MIR1914), microRNA.					
Homo sapiens	RefSeq	XM_001716634.1	ILMN_347426	LOC100133975	XM_001716634.1	XM_001716634.1		100133975	169201811	XM_001716634.1	LOC100133975	XP_001716686.1	ILMN_3245526	0004780296	S	601	GCTGCTGACATTCGGGAGTCAGAGGCTTTTGCATTGGCATTCCCTCTCAC					PREDICTED: Homo sapiens hypothetical protein LOC100133975 (LOC100133975), partial mRNA.					
Homo sapiens	Unigene	Hs.478137	ILMN_95605	HS.478137	Hs.478137		Hs.478137		8162521	AW972675			ILMN_1859300	0003120593	S	208	TCCAAATAAGACCACATTCTGAGGTTCCGGGTGGACATGTTCTTAGGGAG	3	-	166750874-166750923		EST384766 MAGE resequences, MAGL Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XR_015442.2	ILMN_182588	LOC728477	XR_015442.2	XR_015442.2		728477	169209343	XR_015442.2	LOC728477		ILMN_3227255	0000010450	A	568	ACTCTAGGAGCCCCAGCCCCCCAAGAGCTTGTGTGTGCTGACAAGCAGGA				15q26.1b	PREDICTED: Homo sapiens misc_RNA (LOC728477), miscRNA.					
Homo sapiens	RefSeq	XM_377506.3	ILMN_182626	EMR4	NM_001080498.2	NM_001080498.2		326342	139948875	NM_001080498.2	EMR4	NP_001073967.2	ILMN_1736036	0003780673	I	2294	GCGGGAGAAGTGGATTTTCTTCTTGCAGCTACTGCCACCTTGCCAGAAAC	19	-	6903899-6903948	19p13.2e	Homo sapiens egf-like module containing, mucin-like, hormone receptor-like 4 (EMR4), mRNA.				GPR127; PGR16	
Homo sapiens	RefSeq	NR_002190.1	ILMN_16906	SUMO1P3	NR_002190.1	NR_002190.1		474338	54792770	NR_002190.1	SUMO1P3		ILMN_2172221	0006980424	S	903	GAGGGTCTGGACCAAAAGAAGAGGAATATCGGGTTGAAGTCAAGATAACT	1	+	158554581-158554630	1q23.2d	Homo sapiens SUMO1 pseudogene 3 (SUMO1P3), non-coding RNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]			
Homo sapiens	RefSeq	NR_002190.1	ILMN_16906	SUMO1P3	NR_002190.1	NR_002190.1		474338	54792770	NR_002190.1	SUMO1P3		ILMN_1732080	0004050358	S	805	CTCCTGGACTGTGACTTTCAGTGGGAGATGGAAGTGTTTCAGAGAACTGA	1	+	158554483-158554532	1q23.2d	Homo sapiens SUMO1 pseudogene 3 (SUMO1P3), non-coding RNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]			
Homo sapiens	RefSeq	NM_012067.2	ILMN_1206	AKR7A3	NM_012067.2	NM_012067.2		22977	41152113	NM_012067.2	AKR7A3	NP_036199.2	ILMN_1718483	0000270300	S	269	GCTGGGCGGCAGCGACTGCAGAGTGAAAATTGATACCAAGGCCATTCCAC	1	-	19612839-19612866:19614990-19615011	1p36.13b	Homo sapiens aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) (AKR7A3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10383892] [evidence TAS]	The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [pmid 10383892] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [pmid 10383892] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 10383892] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	AFAR2	AFAR2
Homo sapiens	RefSeq	NR_001574.1	ILMN_11432	RBMY2EP	NR_001574.1	NR_001574.1		159125	37693508	NR_001574.1	RBMY2EP		ILMN_2202368	0001580445	S	309	GGTGGCTACGACGAAACCCGTGGTAGAGATCATTCTGATCGTACAAGTGG	Y	-	23557617-23557666	Yq11.223a	Homo sapiens RNA binding motif protein, Y-linked, family 2, member E pseudogene (RBMY2EP), non-coding RNA.					
Homo sapiens	RefSeq	NR_001574.1	ILMN_11432	RBMY2EP	NR_001574.1	NR_001574.1		159125	37693508	NR_001574.1	RBMY2EP		ILMN_2202370	0004230379	S	170	GCCAAAGATATGAATGGAGAGAAATCATCCAAGCTCCCAAGAAACCAGGG	Y	-	23557838-23557867:23562809-23562828	Yq11.223a	Homo sapiens RNA binding motif protein, Y-linked, family 2, member E pseudogene (RBMY2EP), non-coding RNA.					
Homo sapiens	RefSeq	XM_938467.1	ILMN_46515	LOC649397	XM_938467.1	XM_938467.1		649397	89030451	XM_938467.1	LOC649397	XP_943560.1	ILMN_1783827	0000240703	S	978	CATGGGGACAGCAACTGATTCCACCGGGCAGGCACAGTCTCAGTGCAAGA					PREDICTED: Homo sapiens similar to Tripartite motif protein 44 (DIPB protein) (Mc7 protein) (LOC649397), mRNA.					
Homo sapiens	RefSeq	NM_001013838.1	ILMN_11009	RLTPR	NM_001013838.1	NM_001013838.1		146206	66392156	NM_001013838.1	RLTPR	NP_001013860.1	ILMN_1746138	0005050193	S	4268	TCCTCAAACGCAGGCCAAAACTCGAGGCACCTCCATCCCCAAGCCTAGGA	16	+	66248673-66248720:66248810-66248811	16q22.1b	Homo sapiens RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing (RLTPR), mRNA.				LRRC16C	LRRC16C
Homo sapiens	RefSeq	NM_024963.2	ILMN_21876	FBXL18	NM_024963.3	NM_024963.3		80028	142353648	NM_024963.3	FBXL18	NP_079239.2	ILMN_1670920	0006580743	S	2308	GCAGTTGTAAGCCACCGTGTCCAGCCAGTTTCTGTTGTTTGAAGCCCCCA				7p22.1c	Homo sapiens F-box and leucine-rich repeat protein 18 (FBXL18), mRNA.				FLJ11467; FLJ38075; Fbl18	FLJ11467; FLJ38075; Fbl18
Homo sapiens	RefSeq	XM_936102.1	ILMN_33581	LOC642032	XM_936102.1	XM_936102.1		642032	88998649	XM_936102.1	LOC642032	XP_941195.1	ILMN_1655162	0002070328	S	68	TCAGCACCAATGCTACTGAGGATGTCAGAGCACAGGAGCAGGGCCTTGGG					PREDICTED: Homo sapiens hypothetical protein LOC642032 (LOC642032), mRNA.					
Homo sapiens	RefSeq	NM_152911.2	ILMN_26812	PAOX	NM_207127.1	NM_207127.1		196743	46397307	NM_207127.1	PAOX	NP_997010.1	ILMN_1765116	0000830315	A	1083	GAAGCCACACATCGCACGTTTTACTCCACGACGCACGGGGCTCTGCTGTC	10	+	135054827-135054876	10q26.3f	Homo sapiens polyamine oxidase (exo-N4-amino) (PAOX), transcript variant 4, mRNA. XM_001125092 XM_001125093	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of polyamines, any organic compound containing two or more amino groups [goid 6598] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: N1-acetylspermine + O2 + H2O = N1-acetylspermidine + 3-aminopropanal + H2O2 [goid 46592] [evidence IEA]	PAO; RP11-122K13.11; MGC45464; DKFZp434J245	PAO; RP11-122K13.11; MGC45464; DKFZp434J245
Homo sapiens	RefSeq	XM_936923.1	ILMN_174673	FAM18B2	XM_001126735.1	XM_001126735.1		201158	113431086	XM_001126735.1	FAM18B2	XP_001126735.1	ILMN_1682823	0002120372	I	3	GGAACTAAGGATGCAGTCAGATGATTTTGTGAAGGAGCCAGAAACCTTGA				17p12a	PREDICTED: Homo sapiens family with sequence similarity 18, member B2 (FAM18B2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_006770.3	ILMN_26823	MARCO	NM_006770.3	NM_006770.3		8685	56237031	NM_006770.3	MARCO	NP_006761.1	ILMN_1731503	0003180392	S	1574	TCTGGCTGGATAATGTTCAGTGTCGGGGCACGGAGAGTACCCTGTGGAGC	2	+	119468445-119468494	2q14.2b	Homo sapiens macrophage receptor with collagenous structure (MARCO), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9468508] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9468508] [evidence TAS]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Combining with a molecular pattern based on a repeating or polymeric structure, such as a polysaccharide or peptidoglycan, to initiate a change in cell activity. Such molecular patterns are sometimes associated with potential pathogens [goid 8329] [pmid 10331948] [evidence TAS]	SCARA2	SCARA2
Homo sapiens	RefSeq	XM_001713762.1	ILMN_336510	LOC100134333	XM_001713762.1	XM_001713762.1		100134333	169210285	XM_001713762.1	LOC100134333	XP_001713814.1	ILMN_3236892	0005310187	S	275	GCGTTGTCCCCTGGACCTGAGTGGCCAGAGCAGGAGCGGGCAGAGCAGCT					PREDICTED: Homo sapiens hypothetical protein LOC100134333 (LOC100134333), mRNA.					
Homo sapiens	RefSeq	XM_001713808.1	ILMN_344950	LOC100132564	XM_001713808.1	XM_001713808.1		100132564	169204330	XM_001713808.1	LOC100132564	XP_001713860.1	ILMN_3243644	0003780767	S	368	GAGCAGCTCCCTCGCTGCGATCTATTGAAAGTCAGATCTCCACACAAGGG	12	-	126216410-126216459	12q24.32b	PREDICTED: Homo sapiens hypothetical protein LOC100132564 (LOC100132564), mRNA.					
Homo sapiens	RefSeq	NM_172374.1	ILMN_23174	IL4I1	NM_172374.1	NM_172374.1		259307	27477088	NM_172374.1	IL4I1	NP_758962.1	ILMN_1797631	0002640367	I	513	TCACCTTGATTCCGCACATGCCCAACGATGACTTCTGTCCTGGGCTAACC	19	-	55096753-55096786:55096787-55096802	19q13.33b	Homo sapiens interleukin 4 induced 1 (IL4I1), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: a L-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 1716] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FIG1	FIG1
Homo sapiens	RefSeq	NM_152899.1	ILMN_23174	IL4I1	NM_172374.1	NM_172374.1		259307	27477088	NM_172374.1	IL4I1	NP_758962.1	ILMN_1659960	0000540670	A	1973	GCGCTCTGGCAAACCGAAAAGGATGACTGGACGGTCCCTTATGGCCGCAT	19	-	55085015-55085064	19q13.33b	Homo sapiens interleukin 4 induced 1 (IL4I1), transcript variant 2, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: a L-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 1716] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FIG1	FIG1
Homo sapiens	RefSeq	XM_936857.1	ILMN_37356	SLC35F4	XM_936857.2	XM_936857.2		341880	113424889	XM_936857.2	SLC35F4	XP_941950.2	ILMN_1733864	0002640296	A	1503	TGATGTGACTGATCCCAGCATACACCTGCGGGGCAGAGGCAGAGCCAATG				14q23.1a	PREDICTED: Homo sapiens solute carrier family 35, member F4 (SLC35F4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]			
Homo sapiens	RefSeq	XR_038461.1	ILMN_337574	LOC389465	XR_038461.1	XR_038461.1		389465	169171329	XR_038461.1	LOC389465		ILMN_3278735	0001090152	M	1	ACAATGCTGAAAATGGTGATAATGAAAAGATGGCTGCCCTGGAGGCCAAA				7p21.3a	PREDICTED: Homo sapiens misc_RNA (LOC389465), miscRNA.					
Homo sapiens	RefSeq	XM_926731.1	ILMN_39598	LOC643396	XM_926731.1	XM_926731.1		643396	88942963	XM_926731.1	LOC643396	XP_931824.1	ILMN_1809094	0005360224	S	2221	GGCTGTCACCTTAGGGTAGACTGAAAGGCAATGTACTGATTAGATTTGGC	1	+	112742630-112742679		PREDICTED: Homo sapiens hypothetical protein LOC643396 (LOC643396), mRNA.					
Homo sapiens	RefSeq	NM_001031723.1	ILMN_9854	DNAJB14	NM_001031723.1	NM_001031723.1		79982	72534739	NM_001031723.1	DNAJB14	NP_001026893.1	ILMN_1668979	0001030411	I	254	GCACAAAGGACAGCACATCTGGTAGTGGTGAAGGTGGAAAAGGCTATACC	4	-	101070655-101070704	4q23b	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 14 (DNAJB14), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	PRO34683; EGNR9427; FLJ14281; MGC22187	PRO34683; EGNR9427; FLJ14281; MGC22187
Homo sapiens	RefSeq	NM_001031723.1	ILMN_9854	DNAJB14	NM_001031723.1	NM_001031723.1		79982	72534739	NM_001031723.1	DNAJB14	NP_001026893.1	ILMN_1657619	0000060594	A	1055	ATGCAGCAAAAGTATACCGTGATGATCGACTCCGAAGGAAGGCAGATGCC	4	-	101041267-101041316	4q23b	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 14 (DNAJB14), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	PRO34683; EGNR9427; FLJ14281; MGC22187	PRO34683; EGNR9427; FLJ14281; MGC22187
Homo sapiens	RefSeq	NM_001031723.1	ILMN_9854	DNAJB14	NM_001031723.1	NM_001031723.1		79982	72534739	NM_001031723.1	DNAJB14	NP_001026893.1	ILMN_2415898	0001710240	A	1271	CTGAATAGTTGGTTCCTGAAATCTTGGACTGTTTATGACCTACTGGCTCC	4	-	101041051-101041100	4q23b	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 14 (DNAJB14), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	PRO34683; EGNR9427; FLJ14281; MGC22187	PRO34683; EGNR9427; FLJ14281; MGC22187
Homo sapiens	RefSeq	XM_932746.1	ILMN_37095	FAM21B	XM_932746.1	XM_932746.1		55747	89031062	XM_932746.1	FAM21B	XP_937839.1	ILMN_1733736	0002650672	I	1192	GCACCCTAGATTACCTCTCTTTATTGTGTCATGTTTCTCCCCGCTCCTGG	10	+	47464834-47464883	10q11.22b	PREDICTED: Homo sapiens family with sequence similarity 21, member B, transcript variant 3 (FAM21B), mRNA.					
Homo sapiens	RefSeq	NM_199124.1	ILMN_9740	C11ORF63	NM_199124.1	NM_199124.1		79864	40217800	NM_199124.1	C11orf63	NP_954575.1	ILMN_1767103	0006550037	I	1277	CATGTCCAGGGATACAGGACAAGAGTGGGGTTAGAATGGTAGAGTCCACC	11	+	122281205-122281254	11q24.1b	Homo sapiens chromosome 11 open reading frame 63 (C11orf63), transcript variant 2, mRNA.				FLJ23554	FLJ23554
Homo sapiens	RefSeq	NM_199124.1	ILMN_9740	C11ORF63	NM_199124.1	NM_199124.1		79864	40217800	NM_199124.1	C11orf63	NP_954575.1	ILMN_2243516	0001740767	I	1561	CTTAAAGAATTACGTCTGGTGGCACGTTGGCTCATGCCTGTAATCCCAGC	11	+	122281489-122281538	11q24.1b	Homo sapiens chromosome 11 open reading frame 63 (C11orf63), transcript variant 2, mRNA.				FLJ23554	FLJ23554
Homo sapiens	RefSeq	NM_001077685.1	ILMN_163472	AGAP7	NM_001077685.1	NM_001077685.1		653268	117956372	NM_001077685.1	AGAP7	NP_001071153.1	ILMN_2120103	0004390523	S	1703	AGGGGCGGACAAAACCCACAGAAAAGTCCACGAGGGAAGAGAAGGAACGG	10	-	51464829-51464878	10q11.23a	Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH domain 7 (AGAP7), mRNA.				bA109G10.1	bA109G10.1
Homo sapiens	RefSeq	XM_001717684.1	ILMN_352433	LOC100131294	XM_001717684.1	XM_001717684.1		100131294	169205557	XM_001717684.1	LOC100131294	XP_001717736.1	ILMN_3295917	0000450767	M	274	GCACCAGGGCTGTATGTCCGGAGCTCGGGCAGTGTGGAAGAAATATGCAC				12q13.2c	PREDICTED: Homo sapiens similar to RAB13 protein (LOC100131294), mRNA.					
Homo sapiens	RefSeq	NM_001895.3	ILMN_422	CSNK2A1	NM_001895.3	NM_001895.3		1457	47419902	NM_001895.3	CSNK2A1	NP_001886.1	ILMN_2386354	0000430025	A	1833	TCCACCGTCCCACACTTTAGGGGGTTGGTATCTCGTGCTCTTCTCCAGAG	20	-	464341-464390	20p13f	Homo sapiens casein kinase 2, alpha 1 polypeptide (CSNK2A1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10799509] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10799509] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 2174700] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2174700] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 2174700] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11972058] [evidence IPI]	CKII alpha; CK2A1; CKII	CKII alpha; CK2A1; CKII
Homo sapiens	RefSeq	NM_001895.3	ILMN_422	CSNK2A1	NM_001895.3	NM_001895.3		1457	47419902	NM_001895.3	CSNK2A1	NP_001886.1	ILMN_2386355	0000130255	A	1943	GGAGGACCCAATCTATAGGAGCAGTGGACTGCTTGCTGGTCGCTTACATC	20	-	464231-464280	20p13f	Homo sapiens casein kinase 2, alpha 1 polypeptide (CSNK2A1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10799509] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10799509] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 2174700] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2174700] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 2174700] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11972058] [evidence IPI]	CKII alpha; CK2A1; CKII	CKII alpha; CK2A1; CKII
Homo sapiens	RefSeq	NM_024551.2	ILMN_12936	ADIPOR2	NM_024551.2	NM_024551.2		79602	38261972	NM_024551.2	ADIPOR2	NP_078827.2	ILMN_2224833	0006960685	S	3644	GAACTCTCACCAGGTTGGCGCCTGAATGCCTTACTCTCAGCAGTCAGAGG	12	+	1767785-1767834	12p13.33b	Homo sapiens adiponectin receptor 2 (ADIPOR2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12802337] [evidence ISS]; The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen [goid 19395] [pmid 12802337] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any hormone, naturally occurring substances secreted by specialized cells that affect the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42562] [pmid 12802337] [evidence ISS]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	MGC4640; ACDCR2; PAQR2; FLJ21432	MGC4640; PAQR2; FLJ21432; ACDCR2
Homo sapiens	Unigene	Hs.291856	ILMN_85035	HS.291856	Hs.291856		Hs.291856		1212366	N64537			ILMN_1870783	0002000092	S	257	TGGCGTGTTTCCTTGAATGAGGGAGCCAGGATAACATAGAGTCGTTGCAC	4	-	86883905-86883954		yz91f08.s1 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone IMAGE:290439 3, mRNA sequence					
Homo sapiens	RefSeq	XM_929374.1	ILMN_167427	LOC646447	XR_019310.1	XR_019310.1		646447	113422826	XR_019310.1	LOC646447		ILMN_1739201	0000670162	S	362	TAATTTCTGAAGCAGAAAAGGCCTGGCCGCTCGCTCCCCGGCCTGCTGTG					PREDICTED: Homo sapiens similar to heterogeneous nuclear ribonucleoprotein K (LOC646447), mRNA.					
Homo sapiens	Unigene	Hs.582596	ILMN_134777	HS.582596	Hs.582596		Hs.582596		66261045	DR001172			ILMN_1916146	0004570497	S	471	CAACCAATGCCTGTCTTCCACTGGCTGGGGAGGGTAATGTCATGGAGCAC	6	-	165596309-165596335:165598018-165598040		TC103421 Human fetal brain, large insert, pCMV expression library Homo sapiens cDNA clone TC103421 5 similar to Homo sapiens LOC168089 (LOC168089), mRNA sequence					
Homo sapiens	RefSeq	NM_024324.2	ILMN_20793	CRELD2	NM_024324.2	NM_024324.2		79174	31543145	NM_024324.2	CRELD2	NP_077300.2	ILMN_1748707	0006560390	S	1160	TATTCAGAAGGATGTCCCGTGGAAAATGTGGCCCTGAGGATGCCGTCTCC	22	+	48706983-48707032	22q13.33a	Homo sapiens cysteine-rich with EGF-like domains 2 (CRELD2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp667O055; MGC11256	DKFZp667O055; MGC11256
Homo sapiens	RefSeq	NM_019034.2	ILMN_172055	RHOF	NM_019034.2	NM_019034.2		54509	38016956	NM_019034.2	RHOF	NP_061907.2	ILMN_1652918	0002260148	S	2119	TGGGATAATGGCTTCAGGCAACTCCTAGCCTTCCCCATATCTCCTGCCTC	12	-	122215926-122215975	12q24.31b	Homo sapiens ras homolog gene family, member F (in filopodia) (RHOF), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 11084341] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [pmid 11084341] [evidence IDA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 11084341] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RIF; FLJ20247; ARHF	ARHF; RIF; FLJ20247
Homo sapiens	RefSeq	NM_014048.3	ILMN_165049	MKL2	NM_014048.3	NM_014048.3		57496	38569479	NM_014048.3	MKL2	NP_054767.3	ILMN_1690807	0004920095	S	8280	GGAGAAAGATACCAATCTACAGAGCCCTGCTTGTTGAAGCACTAGTTTAA	16	+	14267468-14267517	16p13.12a	Homo sapiens MKL/myocardin-like 2 (MKL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14565952] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of striated muscle development [goid 45844] [pmid 14565952] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 14565952] [evidence IDA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary [goid 51145] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 14565952] [evidence IDA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14565952] [evidence IPI]	MRTF-B; DKFZp686J1745; FLJ31823; FLJ45623; NPD001	MRTF-B; DKFZp686J1745; FLJ31823; FLJ45623; NPD001
Homo sapiens	RefSeq	XM_496890.2	ILMN_31934	LOC441246	XM_496890.2	XM_496890.2		441246	89024953	XM_496890.2	LOC441246	XP_496890.1	ILMN_1788742	0000580717	A	129	GACAGGCGGTGCGGCCTCCAAGCTCCCTAAGATCCTAGTCGTCCGAAAAT	7	-	65709374-65709423	7q11.21e	PREDICTED: Homo sapiens similar to 60S ribosomal protein L35, transcript variant 1 (LOC441246), mRNA.					
Homo sapiens	RefSeq	NM_001079827.2	ILMN_370114	CLRN2	NM_001079827.2	NM_001079827.2		645104	208022634	NM_001079827.2	CLRN2	NP_001073296.1	ILMN_3236671	0007610554	S	692	CGGCCCATGCTGCAAACTTGGTCGTGGTGGCGATCAGTCAAATTCCCCTC	4	+	17528596-17528645	4p15.32b	Homo sapiens clarin 2 (CLRN2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NR_029867.1	ILMN_388193	MIR375	NR_029867.1	NR_029867.1		494324	262206227	NR_029867.1	MIR375		ILMN_3311060	0005570332	S	4	GCGACGAGCCCCTCGCACAAACCGGACCTGAGCGTTTTGTTCGTTCGGCT				2q35f	Homo sapiens microRNA 375 (MIR375), microRNA.					
Homo sapiens	RefSeq	XM_371429.2	ILMN_41302	KIAA1666	XM_371429.2	XM_371429.2		85376	89058493	XM_371429.2	KIAA1666	XP_371429.1	ILMN_1757425	0006380615	S	3920	CTGGGGAGAAGGAAAATTGCTCCCAGCACATGGGCACCAGCAAAAGCCCT	22	-	18837332-18837381	22q11.21d	PREDICTED: Homo sapiens KIAA1666 protein (KIAA1666), mRNA.					
Homo sapiens	Unigene	Hs.577721	ILMN_129902	HS.577721	Hs.577721		Hs.577721		2219346	AA489744			ILMN_1882573	0002060279	S	18	GGTTCTTTGTTTCTCGGCATGGAACAGTTGTGGATGCTGCCTGCGTGGCC	12	+	3731982-3732002:3732005-3732033		aa43c10.r1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:823698 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001354.4	ILMN_13963	AKR1C2	NM_001354.4	NM_001354.4		1646	45446741	NM_001354.4	AKR1C2	NP_001345.1	ILMN_2412336	0005340129	A	1475	CCTGCTTGGCGACTTCAGTAAGCTACAGCTAAGCCCATCGGCCGGAAAAG	10	-	5036139-5036188	10p15.1c	Homo sapiens aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III) (AKR1C2), transcript variant 1, mRNA. XM_943424 XM_943425 XM_943427	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [pmid 8573067] [evidence IDA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 8573067] [evidence IDA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 8573067] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with bile acids, any of a group of steroid carboxylic acids occurring in bile [goid 32052] [pmid 8573067] [evidence IDA]; Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+ [goid 47026] [evidence IEA]; Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol [goid 47115] [pmid 8573067] [evidence IDA]	BABP; HBAB; AKR1C-pseudo; DD; HAKRD; DD2; MCDR2; DDH2	BABP; HBAB; AKR1C-pseudo; DD; HAKRD; DD2; MCDR2; DDH2
Homo sapiens	RefSeq	XM_001725389.1	ILMN_344395	LOC100129322	XM_001725389.1	XM_001725389.1		100129322	169168536	XM_001725389.1	LOC100129322	XP_001725441.1	ILMN_3187362	0001570136	A	158	ATGCAAAGAGCTCAGCTTTCTTTCCTGGTCCTGGTCCTGGTCACTTGGCC				6p24.1c	PREDICTED: Homo sapiens hypothetical protein LOC100129322 (LOC100129322), mRNA.					
Homo sapiens	RefSeq	NM_032553.1	ILMN_26334	GPR174	NM_032553.1	NM_032553.1		84636	14211848	NM_032553.1	GPR174	NP_115942.1	ILMN_1715404	0005910070	S	557	CCAGGAATGTCAACCTGGCCCAGTCCGTTGTTATGATGACCATTGGCGAG	X	+	78313681-78313730	Xq21.1b	Homo sapiens G protein-coupled receptor 174 (GPR174), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	FKSG79	FKSG79
Homo sapiens	RefSeq	NM_032553.1	ILMN_26334	GPR174	NM_032553.1	NM_032553.1		84636	14211848	NM_032553.1	GPR174	NP_115942.1	ILMN_2055609	0002320661	S	1099	CCCAAGCCACAGGGAAGAACTTGCAAAACAACACAGCTTTTCAGTTCTGC	X	+	78314223-78314272	Xq21.1b	Homo sapiens G protein-coupled receptor 174 (GPR174), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	FKSG79	FKSG79
Homo sapiens	RefSeq	NM_021203.2	ILMN_2452	SRPRB	NM_021203.2	NM_021203.2		58477	14917112	NM_021203.2	SRPRB	NP_067026.2	ILMN_1751072	0004480224	S	1569	TCTGCTGCTCTGGATGGCTGAAGGCTCCTGGGCCATCTTCATGTGCTGCT	3	+	133539347-133539396	3q22.1e	Homo sapiens signal recognition particle receptor, B subunit (SRPRB), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	APMCF1	APMCF1
Homo sapiens	RefSeq	NM_032049.1	ILMN_28877	AGTR1	NM_000685.4	NM_000685.4		185	122939142	NM_000685.4	AGTR1	NP_000676.1	ILMN_1814327	0000160682	A	1840	CAACAGGAGATGAGAGTTCCAGATTGTTCTGTCCAGTTTCCAAAGGGCAG	3	+	148460274-148460323	3q24f	Homo sapiens angiotensin II receptor, type 1 (AGTR1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1378723] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 17159080] [evidence NAS]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [pmid 16116425] [evidence IMP]; The process by which an increase in active angiotensin stimulates the adrenal cortices to secrete aldosterone [goid 2018] [pmid 17159080] [evidence NAS]; The process where the diameter of a blood vessel is changed due to activity of the renin-angiotensin system [goid 2034] [pmid 10993080] [evidence IC ]; Any process that modulates the frequency, rate, or extent of natriuresis, the process of renal sodium excretion [goid 3078] [pmid 17159080] [evidence NAS]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [pmid 17159080] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 17159080] [evidence NAS]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 15117835] [evidence IDA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 1378723] [evidence IC ]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 1567413] [evidence IDA]; Any process that activates or increases the activity of the enzyme NAD(P)H oxidase [goid 33864] [pmid 17159080] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 17159080] [evidence NAS]; Any process that modulates the frequency, rate or extent of increases in the diameter of blood vessels [goid 42312] [pmid 1378723] [evidence IC ]; Any process that activates or increases the frequency, rate or extent of the inflammatory response [goid 50729] [pmid 17159080] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [pmid 1567413] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA];  [goid 1596] [pmid 1378723] [evidence IPI];  [goid 1596] [pmid 10993080] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [pmid 8135787] [evidence NAS]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]; Interacting selectively with a bradykinin receptor [goid 31711] [pmid 10993080] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10993080] [evidence IPI]	AT2R1A; AT2R1B; AT2R1; AT1; AT1B; AGTR1B; AGTR1A; AG2S; HAT1R	AT2R1A; AT2R1B; AT2R1; AT1; AT1B; AGTR1B; AGTR1A; AG2S; HAT1R
Homo sapiens	RefSeq	NM_022480.2	ILMN_22504	KLHL25	NM_022480.2	NM_022480.2		64410	21362104	NM_022480.2	KLHL25	NP_071925.2	ILMN_1804494	0006510356	S	3104	TGGGCAGGGTGTCCAAACTTGGGGCTTCCCAGGCACCTGCAGTGTGAACA	15	-	84104001-84104050	15q25.3b	Homo sapiens kelch-like 25 (Drosophila) (KLHL25), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ12587; ENC2	FLJ12587; ENC2
Homo sapiens	RefSeq	NM_001024646.1	ILMN_162592	CLK1	NM_004071.2	NM_004071.2		1195	67551260	NM_004071.2	CLK1	NP_004062.2	ILMN_1679727	0003440138	A	1190	TTAGCCCTAGGGTGGTCCCAACCATGTGATGTCTGGAGCATAGGATGCAT	2	-	201428008-201428054:201429650-201429652	2q33.1e	Homo sapiens CDC-like kinase 1 (CLK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 1704889] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 1825055] [evidence TAS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 1825055] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	STY; CLK; CLK/STY	STY; CLK; CLK/STY
Homo sapiens	RefSeq	NM_004071.2	ILMN_162592	CLK1	NM_004071.2	NM_004071.2		1195	67551260	NM_004071.2	CLK1	NP_004062.2	ILMN_1652790	0001690121	I	531	GTCACCGAAGGAAAAGAACCAGGAGTGTAGAGGATGATGAGGAGGGTCAC	2	-	201433129-201433178	2q33.1e	Homo sapiens CDC-like kinase 1 (CLK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 1704889] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 1825055] [evidence TAS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 1825055] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	STY; CLK; CLK/STY	STY; CLK; CLK/STY
Homo sapiens	Unigene	Hs.112611	ILMN_75158	HS.112611	Hs.112611		Hs.112611		27824589	BX090918			ILMN_1912366	0002350148	S	192	CCTAAACAACTTGGAGGATGGAGGGGGAAACAAAGGAACCAGTTGCAAGC	12	+	67024902-67024949:67029771-67029772		BX090918 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998C192621 ; IMAGE:1048650, mRNA sequence					
Homo sapiens	RefSeq	NM_016133.2	ILMN_3152	INSIG2	NM_016133.2	NM_016133.2		51141	38327532	NM_016133.2	INSIG2	NP_057217.2	ILMN_1676629	0002070039	S	2193	GAGAGAATGTGTCTGTGCATGTGGCCATGCTTTCCTAGAATGTCAAGTAG	2	+	118583677-118583726	2q14.1d	Homo sapiens insulin induced gene 2 (INSIG2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating deprivation of sterols. Sterols are a group of steroids characterized by the presence of one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 6991] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC26273	MGC26273
Homo sapiens	RefSeq	NR_030646.1	ILMN_388237	MIR1225	NR_030646.1	NR_030646.1		100188847	262206290	NR_030646.1	MIR1225		ILMN_3308931	0005700164	S	29	ACACGCCCTGGGCTCTGCCCAGGGTGCAGCCGGACTGACTGAGCCCCTGT					Homo sapiens microRNA 1225 (MIR1225), microRNA.					
Homo sapiens	RefSeq	NM_005231.2	ILMN_13251	CTTN	NM_005231.2	NM_005231.2		2017	20357551	NM_005231.2	CTTN	NP_005222.2	ILMN_1798838	0007400437	I	974	CTGGTTTTGGAGGCAAATTCGGTGTTCAGTCGGAGAGGCAGGACTCCGCT	11	+	69945233-69945282	11q13.3c-q13.3d	Homo sapiens cortactin (CTTN), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9054437] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9054437] [evidence TAS]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	EMS1; FLJ34459	EMS1; FLJ34459
Homo sapiens	RefSeq	NM_138565.1	ILMN_13251	CTTN	NM_005231.2	NM_005231.2		2017	20357551	NM_005231.2	CTTN	NP_005222.2	ILMN_1744912	0000130433	A	2860	TGCAGATGAGTGTGTGTTCTTCCCCAAGGTCCCCCCACAGCTCCAGGACA	11	+	69959949-69959998	11q13.3c-q13.3d	Homo sapiens cortactin (CTTN), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9054437] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9054437] [evidence TAS]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence ISS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	EMS1; FLJ34459	EMS1; FLJ34459
Homo sapiens	RefSeq	NM_152622.2	ILMN_20832	MIER3	NM_152622.3	NM_152622.3		166968	94721312	NM_152622.3	MIER3	NP_689835.3	ILMN_1805910	0006100092	S	2549	GTTTATCCTGAGGCAGTCGACTTGCAGAGGCACAGTCTACAAAGCCTAGG	5	-	56253788-56253837	5q11.2f	Homo sapiens mesoderm induction early response 1, family member 3 (MIER3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	DKFZP781I1119; DKFZp781G1119; FLJ35954; DKFZp686L09111	DKFZp781G1119; DKFZp781I1119
Homo sapiens	RefSeq	XM_001726456.1	ILMN_350474	LOC100130255	XM_001726456.1	XM_001726456.1		100130255	169188543	XM_001726456.1	LOC100130255	XP_001726508.1	ILMN_3270866	0005050468	M	1916	AGACTCTTCCACATTTCCCAGCTTGTCTTCACCCACAGGGCAGTGAGCCT	10	-	123911917-123911966	10q26.13a	PREDICTED: Homo sapiens hypothetical LOC100130255 (LOC100130255), mRNA.					
Homo sapiens	RefSeq	NM_001033.2	ILMN_14789	RRM1	NM_001033.2	NM_001033.2		6240	21071083	NM_001033.2	RRM1	NP_001024.1	ILMN_1771593	0002850575	S	2677	TAGTGGGTTTGCTTGAGGTGGTAAGGCTTTGCTGGACCCTGTTGCAGGCA	11	+	4116255-4116304	11p15.4d	Homo sapiens ribonucleotide reductase M1 polypeptide (RRM1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11517226] [evidence EXP]; An enzyme complex composed of 2-4 or more subunits, which usually contains nonheme iron and requires ATP for catalysis. Catalyzes the formation of 2'-deoxyribonucleoside diphosphate and thioredoxin disulfide from ribonucleoside diphosphate and thioredoxin [goid 5971] [evidence NAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + thioredoxin disulfide + H2O = ribonucleoside diphosphate + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin [goid 4748] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	RR1; R1; RIR1	RR1; R1; RIR1
Homo sapiens	RefSeq	NM_016334.2	ILMN_10695	GPR89A	NM_016334.2	NM_016334.2		51463	56181388	NM_016334.2	GPR89A	NP_057418.1	ILMN_2116594	0000160142	S	112	GCAGGAGCCTTCCTTACACTTCGCCATGAGTTTCCTGATCGACTCCAGCA	1	+	145867249-145867273:145867274-145867298	1q21.1d	Homo sapiens G protein-coupled receptor 89A (GPR89A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	SH120; GPR89	SH120; GPR89
Homo sapiens	Unigene	Hs.128848	ILMN_76703	HS.128848	Hs.128848		Hs.128848		14166306	BG818719			ILMN_1856009	0002570554	S	521	CTGTCAGGGAGCGACCTCAGAGCCAGAGGGGTGAAAGATGAGAGGCAAGA	1	-	37034558-37034607		602779036F2 NCI_CGAP_Brn67 Homo sapiens cDNA clone IMAGE:4914488 5, mRNA sequence					
Homo sapiens	RefSeq	XM_373382.2	ILMN_25389	LOC392563	XM_373382.2	XM_373382.2		392563	51477572	XM_373382.2	LOC392563	XP_373382.2	ILMN_1765878	0003710102	S	1361	GTGAAGCGCACCGACGCGGTCGATGGCAGCTGCGCCTTCGTCACCCGCTT	X	+	19489-19514:19702-19725		PREDICTED: Homo sapiens similar to neurofilament-like protein (LOC392563), mRNA.					
Homo sapiens	Unigene	Hs.583250	ILMN_135431	HS.583250	Hs.583250		Hs.583250		73475762	BY797743			ILMN_1852914	0006040041	S	395	GCCAGCAAGAACACAGGAGGAAGTACTCAAATCTCCCTTACACAGCTGGG	11	-	82992503-82992552		BY797743 Homo sapiens eye Homo sapiens cDNA clone HEmEye2018A10_069.ab1 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002453.2	ILMN_165311	MTIF2	NM_001005369.1	NM_001005369.1		4528	53729338	NM_001005369.1	MTIF2	NP_001005369.1	ILMN_1765520	0002230403	A	2586	GCTGTGGAAGAGCACCCAGTAGGTGAGGCATCTATACTAGCTACCTTCTC	2	-	55464536-55464564:55467147-55467167	2p16.1d	Homo sapiens mitochondrial translational initiation factor 2 (MTIF2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any part of the small ribosomal subunit [goid 43024] [evidence ISS]		
Homo sapiens	RefSeq	NM_001005369.1	ILMN_165311	MTIF2	NM_001005369.1	NM_001005369.1		4528	53729338	NM_001005369.1	MTIF2	NP_001005369.1	ILMN_1791403	0002320470	I	295	GGGCTCCAATTTGAGGCGAGCCACCCCAGATCCGTAATTTTTCTGCAGTG	2	-	55495971-55496020	2p16.1d	Homo sapiens mitochondrial translational initiation factor 2 (MTIF2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any part of the small ribosomal subunit [goid 43024] [evidence ISS]		
Homo sapiens	RefSeq	XM_001127094.2	ILMN_176058	LOC730755	XM_001127094.2	XM_001127094.2		730755	169211789	XM_001127094.2	LOC730755	XP_001127094.1	ILMN_3246319	0005870082	S	765	TTTCAAGGTTCTCAGATGAGATTTTTTCTTCCAGGATAATACTATTTGTA					PREDICTED: Homo sapiens similar to keratin associated protein 2-4 (LOC730755), mRNA.					
Homo sapiens	RefSeq	XR_036867.1	ILMN_344276	LOC100131046	XR_036867.1	XR_036867.1		100131046	169210674	XR_036867.1	LOC100131046		ILMN_3286470	0006370072	M	3096	GAGTGGCGGTGTTCCTACCCTCCTGGTTTCCTTGGGAGTCAGCTTCAATA				16p12.3a	PREDICTED: Homo sapiens misc_RNA (LOC100131046), miscRNA.					
Homo sapiens	RefSeq	NM_001035005.2	ILMN_26126	C18ORF32	NM_001035005.2	NM_001035005.2		497661	113680018	NM_001035005.2	C18orf32	NP_001030177.1	ILMN_2196588	0002940201	S	844	CAGTCCAGTGAAACTGTGCAGGGAAATGAAGGTAGAATTTTGGGAGGTAA	18	-	47008264-47008313	18q21.1f	Homo sapiens chromosome 18 open reading frame 32 (C18orf32), mRNA.		Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	FLJ23458	FLJ23458
Homo sapiens	RefSeq	NM_001013836.1	ILMN_9328	MAD1L1	NM_001013836.1	NM_001013836.1		8379	62243368	NM_001013836.1	MAD1L1	NP_001013858.1	ILMN_2358069	0002630370	A	2166	TACACGCTCACCGGCTACCAGATCGACATCACCACGGAGAACCAGTACCG	7	-	2222429-2222448:2224123-2224152	7p22.3a-p22.2c	Homo sapiens MAD1 mitotic arrest deficient-like 1 (yeast) (MAD1L1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 9546394] [evidence NAS]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 9546394] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12006501] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11804586] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11181178] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	Progression through metaphase, the stage of mitosis at which chromosomes are firmly attached to the mitotic spindle at its equator but have not yet segregated to opposite poles [goid 89] [pmid 9546394] [evidence NAS]; Progression through anaphase, the stage of mitosis during which the two sets of chromosomes separate and move away from each other [goid 90] [pmid 9546394] [evidence NAS]; Progression through telophase, the last of the stages of mitosis; in the canonical cell cycle, telophase begins when the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts [goid 93] [pmid 9546394] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 9546394] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418410] [evidence IPI]	PIG9; HsMAD1; TXBP181; MAD1; TP53I9	PIG9; MAD1; TP53I9; HsMAD1; TXBP181
Homo sapiens	RefSeq	NM_001013836.1	ILMN_9328	MAD1L1	NM_001013836.1	NM_001013836.1		8379	62243368	NM_001013836.1	MAD1L1	NP_001013858.1	ILMN_2358074	0003400647	A	1797	GAGCGGAGTCGGCTGGAGGAGGAAAAGAGGATGCTGGAGGCACAGCTGGA	7	-	2228878-2228915:2231571-2231582	7p22.3a-p22.2c	Homo sapiens MAD1 mitotic arrest deficient-like 1 (yeast) (MAD1L1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 9546394] [evidence NAS]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 9546394] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12006501] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11804586] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11181178] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	Progression through metaphase, the stage of mitosis at which chromosomes are firmly attached to the mitotic spindle at its equator but have not yet segregated to opposite poles [goid 89] [pmid 9546394] [evidence NAS]; Progression through anaphase, the stage of mitosis during which the two sets of chromosomes separate and move away from each other [goid 90] [pmid 9546394] [evidence NAS]; Progression through telophase, the last of the stages of mitosis; in the canonical cell cycle, telophase begins when the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts [goid 93] [pmid 9546394] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 9546394] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418410] [evidence IPI]	PIG9; HsMAD1; TXBP181; MAD1; TP53I9	PIG9; MAD1; TP53I9; HsMAD1; TXBP181
Homo sapiens	RefSeq	NM_152520.4	ILMN_16766	ZNF385B	NM_152520.4	NM_152520.4		151126	164663776	NM_152520.4	ZNF385B	NP_689733.3	ILMN_3227600	0002060113	A	2123	CCCACAAAATGCAGCCCACCACCCAGTCCCCCAATTCCAGAGAGAAACAC	2	-	180307824-180307873	2q31.2c-q31.3a	Homo sapiens zinc finger protein 385B (ZNF385B), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ25270; ZNF533	FLJ25270
Homo sapiens	RefSeq	NM_152520.4	ILMN_16766	ZNF385B	NM_152520.4	NM_152520.4		151126	164663776	NM_152520.4	ZNF385B	NP_689733.3	ILMN_3304200	0002690039	M	2559	GACAGGGATTGTGTACTGTTTCGACCCAAGTACTGCTGTATCCTGTGTAG	2	-	180307388-180307437	2q31.2c-q31.3a	Homo sapiens zinc finger protein 385B (ZNF385B), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ25270; ZNF533	FLJ25270
Homo sapiens	RefSeq	NM_052897.3	ILMN_162772	MBD6	NM_052897.3	NM_052897.3		114785	46852160	NM_052897.3	MBD6	NP_443129.3	ILMN_1746012	0001770343	S	3943	GTGATGATGCGACTGAGGATTATGCAACGTGGTCCAACCGGAGCGGCCAG	12	+	56209991-56210040	12q13.3b	Homo sapiens methyl-CpG binding domain protein 6 (MBD6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	KIAA1887	KIAA1887
Homo sapiens	Unigene	Hs.370359	ILMN_88045	HS.370359	Hs.370359		Hs.370359		31873434	BX537698			ILMN_1848552	0007000193	S	4953	CCAGCCTATACTGCTAGCAGCTGCTCATACTGCAGTCAATTACTGGAAGC	9	-	14071874-14071923		Homo sapiens mRNA; cDNA DKFZp686F09166 (from clone DKFZp686F09166)					
Homo sapiens	RefSeq	XM_929001.1	ILMN_40130	LOC646041	XM_929001.1	XM_929001.1		646041	89029172	XM_929001.1	LOC646041	XP_934094.1	ILMN_1802928	0007000689	S	119	GAGAAGGAAAGCACCTTCGCCAGGAGAGTTGGATGGGCATTTCTGACTGC	9	-	7780856-7780905		PREDICTED: Homo sapiens hypothetical protein LOC646041 (LOC646041), mRNA.					
Homo sapiens	RefSeq	XM_928387.1	ILMN_41055	LOC653610	XM_928387.1	XM_928387.1		653610	88943486	XM_928387.1	LOC653610	XP_933480.1	ILMN_1695435	0002320689	S	713	ATGCTGGCCACTCTCAGTCCAGCGTTCCTCAGTAGTGAATAGCGAACCTG	1	+	148089810-148089859		PREDICTED: Homo sapiens similar to Histone H2A.o (H2A/o) (H2A.2) (H2a-615) (LOC653610), mRNA.					
Homo sapiens	RefSeq	NM_198973.1	ILMN_5430	MKNK1	NM_198973.1	NM_198973.1		8569	39752688	NM_198973.1	MKNK1	NP_945324.1	ILMN_1725738	0002650424	A	1060	CCGCCAGCTATCTCAGCACGAAGAGAACGAACTAGCAGAGGAGCCAGAGG	1	-	46796955-46797004	1p33d	Homo sapiens MAP kinase interacting serine/threonine kinase 1 (MKNK1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9155018] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 9155018] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9155018] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9878069] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9155018] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MNK1	MNK1
Homo sapiens	RefSeq	XR_041765.1	ILMN_347695	ZC3H11B	XR_041765.1	XR_041765.1		643136	169162484	XR_041765.1	ZC3H11B		ILMN_3227415	0004610445	A	2423	GCGTCCTACAGGAACCCCCAGCCAAAAAGGCAGCTGTGGATGCTGTTGTC				1q41c	PREDICTED: Homo sapiens misc_RNA (ZC3H11B), miscRNA.					
Homo sapiens	RefSeq	XR_039922.1	ILMN_352409	C6ORF100	XR_039922.1	XR_039922.1		729583	169168662	XR_039922.1	C6orf100		ILMN_3273206	0002690291	M	129	AAGGGGTCGAAGAGACCGAGAGCGCCAGAGGACGCCATGGGCTCCACATC				6p22.1a	PREDICTED: Homo sapiens misc_RNA (C6orf100), miscRNA.					
Homo sapiens	RefSeq	XM_001717722.1	ILMN_336713	LOC100133890	XM_001717722.1	XM_001717722.1		100133890	169203020	XM_001717722.1	LOC100133890	XP_001717774.1	ILMN_3237114	0002120092	S	825	AGGTGATCCCTACTGCTGCGAGCTTCTCCTGCACGAACACGCCACTGTGT					PREDICTED: Homo sapiens similar to Shank2E (LOC100133890), mRNA.					
Homo sapiens	RefSeq	NR_030393.1	ILMN_388243	MIR549	NR_030393.1	NR_030393.1		693132	262206304	NR_030393.1	MIR549		ILMN_3309899	0001450592	S	28	GCTCATCCATAGTTGTCACTGTCTCAAATCAGTGACAACTATGGATGAGC				15q25.1b	Homo sapiens microRNA 549 (MIR549), microRNA.					
Homo sapiens	RefSeq	XM_499097.2	ILMN_41711	LOC441316	XM_499097.2	XM_499097.2		441316	89027758	XM_499097.2	LOC441316	XP_499097.2	ILMN_1664629	0001570377	S	42	TGCTGTGCTAGAGGCTGATAATTTTTCTCCAGGTAGAGTAAAAGATCAAG	8	+	7384607-7384656		PREDICTED: Homo sapiens hypothetical LOC441316 (LOC441316), mRNA.					
Homo sapiens	RefSeq	NM_032787.1	ILMN_6384	GPR128	NM_032787.1	NM_032787.1		84873	14249453	NM_032787.1	GPR128	NP_116176.1	ILMN_2125395	0000050162	S	2997	CCTTCCAGAACAAAATGACTCCTGATGAACAGTGTGTGGGGATTTGCTTG	3	+	101896882-101896931	3q12.2a	Homo sapiens G protein-coupled receptor 128 (GPR128), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	MGC163260; FLJ29035; MGC142011; FLJ16382; FLJ14454	MGC163260; FLJ29035; MGC142011; FLJ16382; FLJ14454
Homo sapiens	RefSeq	NM_032787.1	ILMN_6384	GPR128	NM_032787.1	NM_032787.1		84873	14249453	NM_032787.1	GPR128	NP_116176.1	ILMN_1808078	0006270612	S	2547	GGTCATTGCCAACCTTACATGAACGCTTTAGGCTACTGGAAACCTCTCCG	3	+	101896432-101896481	3q12.2a	Homo sapiens G protein-coupled receptor 128 (GPR128), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	MGC163260; FLJ29035; MGC142011; FLJ16382; FLJ14454	MGC163260; FLJ29035; MGC142011; FLJ16382; FLJ14454
Homo sapiens	RefSeq	NM_176822.2	ILMN_163496	NLRP14	NM_176822.3	NM_176822.3		338323	119395762	NM_176822.3	NLRP14	NP_789792.1	ILMN_1782651	0002690364	S	3669	CCAGACTTGGGTGCTTAGCTTCAGATACTCTATGCCCAGAGATAGTGCAC	11	+	7048161-7048210	11p15.4b	Homo sapiens NLR family, pyrin domain containing 14 (NLRP14), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 16931801] [evidence IMP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	PAN8; NOD5; NALP14; CLR11.2; GC-LRR	NOD5; GC-LRR
Homo sapiens	RefSeq	NM_024854.2	ILMN_162990	LOC642732	XR_015408.1	XR_015408.1		642732	113423096	XR_015408.1	LOC642732		ILMN_1651507	0007150692	S	1182	TCTATGCTGCCGGTGACATCTGTACTACATCCTGGCAGCTGAGCCCAGTC				11q22.3b-q22.3c	PREDICTED: Homo sapiens misc_RNA (LOC642732), miscRNA.					FLJ22028
Homo sapiens	Unigene	Hs.572681	ILMN_124862	HS.572681	Hs.572681		Hs.572681		2051880	AA398758			ILMN_1853798	0005550349	S	159	GGGAAGCCATGCAAGTAGAGGCAGAAGTTGTTTCAGCTTCGGAAAGGGCC	2	-	111680333-111680382		zt64a09.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:727096 3, mRNA sequence					
Homo sapiens	RefSeq	NM_177939.2	ILMN_1593	P4HTM	NM_177938.2	NM_177938.2		54681	64085082	NM_177938.2	P4HTM	NP_808807.2	ILMN_1672122	0002760301	A	2211	CTCCATCTGCCCCGTCAAATAAAAAACCACAAGGTTCGAGCCGCCGGGCC	3	+	49019514-49019563	3p21.31d	Homo sapiens prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) (P4HTM), transcript variant 3, mRNA.				P4H-TM	P4H-TM
Homo sapiens	RefSeq	NM_177938.2	ILMN_1593	P4HTM	NM_177938.2	NM_177938.2		54681	64085082	NM_177938.2	P4HTM	NP_808807.2	ILMN_2372136	0005220398	A	2146	TTGCCCCACCCCGCCAGCCGCGATACGGCGCAGTTCCTATATTCATGTTA	3	+	49019449-49019498	3p21.31d	Homo sapiens prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) (P4HTM), transcript variant 3, mRNA.				P4H-TM	P4H-TM
Homo sapiens	RefSeq	NM_177938.2	ILMN_1593	P4HTM	NM_177938.2	NM_177938.2		54681	64085082	NM_177938.2	P4HTM	NP_808807.2	ILMN_3300313	0007000202	M	2074	TCGCCAGTTGCCCAAGATCAGGGGTCCGGCTGTCCTTCTGTCCTGCTGCA	3	+	49019377-49019426	3p21.31d	Homo sapiens prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) (P4HTM), transcript variant 3, mRNA.				P4H-TM	P4H-TM
Homo sapiens	RefSeq	NM_153281.1	ILMN_30249	HYAL1	NM_153282.1	NM_153282.1		3373	24497565	NM_153282.1	HYAL1	NP_695014.1	ILMN_1739813	0001070400	A	1869	GGTAACCAGCCCTGCACGACCCCTGAATCTGCTGAGAGGCACCAGTCCAG	3	-	50337345-50337394	3p21.31b	Homo sapiens hyaluronoglucosaminidase 1 (HYAL1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9223416] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [pmid 9223416] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	LUCA1; HYAL-1; MGC45987; NAT6	LUCA1; HYAL-1; MGC45987; NAT6
Homo sapiens	RefSeq	NM_018702.1	ILMN_10534	ADARB2	NM_018702.1	NM_018702.1		105	8922076	NM_018702.1	ADARB2	NP_061172.1	ILMN_1749493	0006110519	S	3460	GTCCGTCATGGCGTTTGGTTTATGGTGGCCGATACTAAGAGCCACTGAGG	10	-	1218169-1218218	10p15.3c-p15.3b	Homo sapiens adenosine deaminase, RNA-specific, B2 (RED2 homolog rat) (ADARB2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with double-stranded RNA [goid 3725] [pmid 10836796] [evidence TAS]; Interacting selectively with single-stranded RNA [goid 3727] [pmid 10836796] [evidence TAS]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [pmid 10836796] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3 [goid 4000] [evidence IEA]	hRED2; RED2; FLJ25034; FLJ36975; ADAR3	hRED2; RED2; FLJ25034; FLJ36975; ADAR3
Homo sapiens	RefSeq	XM_929733.1	ILMN_31489	LOC646781	XM_929733.1	XM_929733.1		646781	88965845	XM_929733.1	LOC646781	XP_934826.1	ILMN_1718502	0002100364	S	61	GTTTTCATGAACTTAGGTTCTACTGGCATAGAGGTCTTAGGAAGTTCTAA	3	+	146259393-146259442		PREDICTED: Homo sapiens hypothetical protein LOC646781 (LOC646781), mRNA.					
Homo sapiens	RefSeq	NR_031663.1	ILMN_388591	MIR1261	NR_031663.1	NR_031663.1		100302228	269847332	NR_031663.1	MIR1261		ILMN_3309729	0001030554	S	13	GCTTTGGCTTATGGGGATATTGTGGTTGATCTGTTCTATCCAGATGACTG					Homo sapiens microRNA 1261 (MIR1261), microRNA.					
Homo sapiens	RefSeq	XM_942954.1	ILMN_138511	PMS2	XM_942954.1	XM_942954.1		5395	89025749	XM_942954.1	PMS2	XP_948047.1	ILMN_1670300	0005260246	I	483	ATCTCAACATCTCAACTTCTAGCTTCTGAATTCTGTTTTGTCTCGCTGCC				7p22.1b	PREDICTED: Homo sapiens PMS2 postmeiotic segregation increased 2 (S. cerevisiae), transcript variant 4 (PMS2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10871409] [evidence IC ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 10871409] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10871409] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 11809883] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11793469] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with double-stranded DNA containing a single base insertion or deletion [goid 32138] [pmid 10871409] [evidence IDA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [pmid 16403449] [evidence IDA]		
Homo sapiens	RefSeq	NM_002084.2	ILMN_165414	GPX3	NM_002084.3	NM_002084.3		2878	89903006	NM_002084.3	GPX3	NP_002075.2	ILMN_1726666	0005490019	S	1674	CTTCGGAGGACGTGCCCTCACCCCTCACTGGTCCACTGGCTTGAGACTCA	5	+	150388660-150388709	5q33.1d	Homo sapiens glutathione peroxidase 3 (plasma) (GPX3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1897960] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid hydroperoxide stimulus. Lipid hydroperoxide is the highly reactive primary oxygenated products of polyunsaturated fatty acids [goid 6982] [pmid 2491950] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [pmid 2491950] [evidence TAS]; The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits [goid 51289] [pmid 3693360] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [pmid 3693360] [evidence IDA]; Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [pmid 1897960] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 8056346] [evidence TAS]; Interacting selectively with selenium (Se) [goid 8430] [pmid 2491950] [evidence IDA]; Interacting selectively with selenium (Se) [goid 8430] [pmid 3693360] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	GSHPx-P; GSHPx-3; GPx-P	
Homo sapiens	RefSeq	NM_012269.1	ILMN_5786	HYAL4	NM_012269.1	NM_012269.1		23553	6912427	NM_012269.1	HYAL4	NP_036401.1	ILMN_1704598	0004570703	S	1990	AGACGGCTGATGGCTGCTCTGGGGTTTCCCCTTCTCCTGGTTCACTAATG	7	+	123304351-123304400	7q31.32b	Homo sapiens hyaluronoglucosaminidase 4 (HYAL4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars [goid 6027] [pmid 10493834] [evidence TAS]; The binding and fusion of a sperm, having penetrated the zona pellucida, with the plasma membrane of the oocyte. Binding occurs at the posterior (post-acrosomal) region of the sperm head [goid 7342] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [pmid 10493834] [evidence TAS]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]		
Homo sapiens	Unigene	Hs.537679	ILMN_103436	HS.537679	Hs.537679		Hs.537679		5766191	AI969373			ILMN_1906239	0004480392	S	202	TAACCAGAAGCCCGGAGTGTCCACCTCTCTATCCTGGTGTATCTTCCCCA	1	-	211160101-211160150		wq97g02.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2480018 3, mRNA sequence					
Homo sapiens	RefSeq	NM_173477.2	ILMN_20086	USH1G	NM_173477.2	NM_173477.2		124590	34304382	NM_173477.2	USH1G	NP_775748.2	ILMN_1717852	0001990132	S	3294	TGCCTGCCACCGCCATCTGGAGCCCACCACAGCTCTTCTCCCTGTTCTCT	17	-	72912393-72912442	17q25.1c	Homo sapiens Usher syndrome 1G (autosomal recessive) (USH1G), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 12588794] [evidence ISS]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 12588794] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 11398101] [evidence IMP]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [pmid 11398101] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive an orientational stimulus, convert it to a molecular signal, and recognize and characterize the signal. Equilibrioception refers to a combination of processes by which an organism can perceive its orientation with respect to gravity. In animals, stimuli come from labyrinth system of the inner ears, monitoring the direction of motion; visual stimuli, with information on orientation and motion; pressure receptors, which tell the organism which body surfaces are in contact with the ground; and proprioceptive cues, which report which parts of the body are in motion [goid 50957] [pmid 12588794] [evidence IMP]; The process whereby relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound [goid 60113] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]	ANKS4A; FLJ33924; SANS	ANKS4A; FLJ33924; SANS
Homo sapiens	RefSeq	XM_001725597.1	ILMN_338507	LOC729020	XM_001725597.1	XM_001725597.1		729020	169201375	XM_001725597.1	LOC729020	XP_001725649.1	ILMN_3299416	0004180397	M	1	TCTAGTCTTGCCGGGGACTCGTGGGGTAACTTGTTCTTGGGAGCCAGCGG				10q24.33a	PREDICTED: Homo sapiens rcRPE (LOC729020), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: D-ribulose 5-phosphate = D-xylulose 5-phosphate [goid 4750] [evidence IEA]		
Homo sapiens	RefSeq	XR_015973.1	ILMN_177067	LOC729538	XR_015973.1	XR_015973.1		729538	113426713	XR_015973.1	LOC729538		ILMN_3228335	0005420079	A	293	CAGCCCCCTCCTGAGTAACCAAGTCCTAGGGAAGGAGATCACCAGCATGC	17	-	22878034-22878083	17q11.1c	PREDICTED: Homo sapiens misc_RNA (LOC729538), miscRNA.					
Homo sapiens	RefSeq	XM_001720217.1	ILMN_347551	LOC100133690	XM_001720217.1	XM_001720217.1		100133690	169166054	XM_001720217.1	LOC100133690	XP_001720269.1	ILMN_3245635	0001780292	S	3	GTATGCCCTTGCTCACCTGGCCTGAAGACGGTGGCGGAGATCAAGAGGCA					PREDICTED: Homo sapiens hypothetical LOC100133690 (LOC100133690), mRNA.					
Homo sapiens	RefSeq	NM_001013626.1	ILMN_20079	LOC286187	NM_001013626.1	NM_001013626.1		286187	61966708	NM_001013626.1	LOC286187	NP_001013648.1	ILMN_2215153	0006420014	S	999	TCTGCTGTTCAGAAGTAATTAAAGCACCTGATACTTATTCCTTAAGGAGG	8	-	68062955-68063004	8q13.1b-q13.2a	Homo sapiens similar to RIKEN cDNA 1700011J18 (LOC286187), mRNA.					
Homo sapiens	RefSeq	XM_926330.1	ILMN_46191	LOC653175	XM_926330.1	XM_926330.1		653175	89024904	XM_926330.1	LOC653175	XP_931423.1	ILMN_1665581	0004850367	S	61	CTCGGCTTCGAGCCAGGCCCAGCAACCATTGCCTGCGGAAAGATCGTGTC	7	+	53222635-53222684	7p12.1a	PREDICTED: Homo sapiens similar to family with sequence similarity 29, member A (LOC653175), mRNA.					
Homo sapiens	RefSeq	XM_945559.1	ILMN_44824	LOC387895	XM_945559.2	XM_945559.2		387895	113423977	XM_945559.2	LOC387895	XP_950652.2	ILMN_1683426	0002680243	S	78	GGGAAGAAGACTTCTCGTCTCAGTAACAATAACAAGAAAAACAGCCTAGA				12q24.32a	PREDICTED: Homo sapiens hypothetical gene supported by BC040060 (LOC387895), mRNA.					
Homo sapiens	RefSeq	XM_943487.1	ILMN_36589	LOC647065	XM_934270.2	XM_934270.2		647065	113413275	XM_934270.2	LOC647065	XP_939363.2	ILMN_1656181	0007330364	S	61	GGTCAATTGCTGAGGCTTCACAGTTCCCTTCTCTCTTACACTCGGACCGT	2	+	148494343-148494392	2q23.1a	PREDICTED: Homo sapiens hypothetical LOC647065 (LOC647065), mRNA.					
Homo sapiens	RefSeq	NR_002794.1	ILMN_13237	TREML2P	NR_002794.1	NR_002794.1		221438	84872076	NR_002794.1	TREML2P		ILMN_2074894	0000770091	S	46	CGCATGGAGGGCAAGGTTTGGTGCAAAATCAGGAAGAAGTGTGAGCCTGG	6	+	41217160-41217209	6p21.1g	Homo sapiens triggering receptor expressed on myeloid cells-like 2 pseudogene (TREML2P), non-coding RNA.				TLT5	TLT5
Homo sapiens	Unigene	Hs.571039	ILMN_123220	HS.571039	Hs.571039		Hs.571039		27880800	BX117128			ILMN_1823477	0001260044	S	75	CAGGACTGTGAGCTAGAACAGGAGAGTGAATGTTCGCTGGGGCCTTCCAG	6	-	158233777-158233826		BX117128 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998H103715, mRNA sequence					
Homo sapiens	RefSeq	NR_029874.1	ILMN_388221	MIR382	NR_029874.1	NR_029874.1		494331	262206264	NR_029874.1	MIR382		ILMN_3308575	0003850181	S	15	TGTTCGTGGTGGATTCGCTTTACTTATGACGAATCATTCACGGACAACAC				14q32.31a	Homo sapiens microRNA 382 (MIR382), microRNA.					
Homo sapiens	Unigene	Hs.543938	ILMN_107440	HS.543938	Hs.543938		Hs.543938		6043057	AW087252			ILMN_1856498	0001510369	S	89	ATGGATTTTCTTTATGGAGTCATAGGTAGGATGGCTATTTTAGTGATTAT	5	+	124690284-124690333		xb97d09.x1 NCI_CGAP_Co21 Homo sapiens cDNA clone IMAGE:2582705 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006602.2	ILMN_12278	TCFL5	NM_006602.2	NM_006602.2		10732	38505158	NM_006602.2	TCFL5	NP_006593.2	ILMN_1814247	0001510154	S	2064	CCCCCTTGTCATGACTCTGAGTCACGTGCTGCTGTATTGCAACGTGCAGG	20	-	61472809-61472858	20q13.33d	Homo sapiens transcription factor-like 5 (basic helix-loop-helix) (TCFL5), mRNA.	The nucleus of a male germ cell, a cell specialized to produce haploid gametes, and its descendents [goid 1673] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9763657] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9763657] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9763657] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9763657] [evidence IEP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 9763657] [evidence IEP]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 9763657] [evidence IEP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9763657] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9763657] [evidence TAS]	E2BP-1; CHA; MGC46135; Figlb	MGC46135; E2BP-1; CHA; Figlb
Homo sapiens	RefSeq	NM_080757.1	ILMN_15264	C20ORF127	NM_080757.1	NM_080757.1		140851	50233782	NM_080757.1	C20orf127	NP_542795.1	ILMN_1662640	0004480600	S	169	TCTGCAAAGGGGCGTGCAGCTGCTGTGTCTGATGTGGGGACAGCTCTTCT	20	+	33269618-33269649:33269650-33269667	20q11.22b	Homo sapiens chromosome 20 open reading frame 127 (C20orf127), mRNA.				dJ614O4.6; MGC118948	dJ614O4.6; MGC118948
Homo sapiens	RefSeq	NR_029687.1	ILMN_387859	MIR152	NR_029687.1	NR_029687.1		406943	262205334	NR_029687.1	MIR152		ILMN_3311065	0002940035	S	18	TTCTGTGATACACTCCGACTCGGGCTCTGGAGCAGTCAGTGCATGACAGA					Homo sapiens microRNA 152 (MIR152), microRNA.					
Homo sapiens	RefSeq	NM_023930.2	ILMN_179665	KCTD14	NM_023930.3	NM_023930.3		65987	142356949	NM_023930.3	KCTD14	NP_076419.2	ILMN_1731044	0002940632	S	1215	GTAGTAGGTGCTTTCCTGATCCCCTTTGCGAGATGCTGTGGGTGCTAACA	11	-	77727167-77727216	11q14.1a	Homo sapiens potassium channel tetramerisation domain containing 14 (KCTD14), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC2376	MGC2376
Homo sapiens	RefSeq	NM_004100.3	ILMN_24832	EYA4	NM_004100.3	NM_004100.3		2070	98991759	NM_004100.3	EYA4	NP_004091.3	ILMN_2324734	0002350139	A	4813	GGTTGACGGAGAACAGCTTGTCTGGCACAACAATGGTGCAGGCCCACGAG	6	+	133894071-133894120	6q23.2c	Homo sapiens eyes absent homolog 4 (Drosophila) (EYA4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9887327] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9887327] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DFNA10; CMD1J	CMD1J; DFNA10
Homo sapiens	RefSeq	NM_172104.1	ILMN_24832	EYA4	NM_004100.3	NM_004100.3		2070	98991759	NM_004100.3	EYA4	NP_004091.3	ILMN_1671844	0001260180	A	2692	GCAGCAACACACATGCTCCGTCTGACAAGGTGGTCAACAACATTCCTCAA	6	+	133891950-133891999	6q23.2c	Homo sapiens eyes absent homolog 4 (Drosophila) (EYA4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9887327] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9887327] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DFNA10; CMD1J	CMD1J; DFNA10
Homo sapiens	Unigene	Hs.179115	ILMN_80625	HS.179115	Hs.179115		Hs.179115		10820436	BF061433			ILMN_1866043	0003440176	S	339	GCTTCATCAATCACATGGGGCTGGGGCAGTGAGGAGGATGTATTTGCCTC	9	+	97825791-97825840		7j53f11.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:3390189 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020189.4	ILMN_21796	ENY2	NM_020189.4	NM_020189.4		56943	34222364	NM_020189.4	ENY2	NP_064574.1	ILMN_2166865	0002940079	S	260	CTTGGTGGCTGAAATCACTCCAAAAGGCAGAGCCCTGGTACCTGACAGTG	8	+	110352761-110352792:110355634-110355651	8q23.1d	Homo sapiens enhancer of yellow 2 homolog (Drosophila) (ENY2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		DC6; FLJ20480; e(y)2	DC6; FLJ20480; e(y)2
Homo sapiens	RefSeq	NM_003170.3	ILMN_7343	SUPT6H	NM_003170.3	NM_003170.3		6830	75677341	NM_003170.3	SUPT6H	NP_003161.2	ILMN_1758717	0003370750	S	5449	ATGCTAGGCAACAATTCTCCCGCTCCAGACCCTCACCGACCACCTGTCCT	17	+	24052948-24052997	17q11.2a	Homo sapiens suppressor of Ty 6 homolog (S. cerevisiae) (SUPT6H), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8786132] [evidence NAS]	Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 8786132] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8786132] [evidence TAS]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule following transcription initiation [goid 3711] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]	MGC87943; SPT6H; KIAA0162; SPT6; emb-5	MGC87943; SPT6H; KIAA0162; SPT6; emb-5
Homo sapiens	RefSeq	NR_002194.1	ILMN_12255	CSPG4LYP2	NR_002194.1	NR_002194.1		84664	56606062	NR_002194.1	CSPG4LYP2		ILMN_2117845	0006660327	S	576	GGCCAGTGCACACAGACAGTGCACACGGTGCACTCTACAAGTGACCATTG	Y	-	26332753-26332802	Yq11.223e	Homo sapiens chondroitin sulfate proteoglycan 4-like, Y-linked pseudogene 2 (CSPG4LYP2), non-coding RNA.					
Homo sapiens	RefSeq	NM_003161.2	ILMN_162232	RPS6KB1	NM_003161.2	NM_003161.2		6198	55925648	NM_003161.2	RPS6KB1	NP_003152.1	ILMN_1704557	0001940576	S	5180	ATTCTTCAGCTGCCTTATTAGGAGTGCTATGAGGGTAACACCTGTTCTGC	17	+	55382430-55382479	17q23.1a	Homo sapiens ribosomal protein S6 kinase, 70kDa, polypeptide 1 (RPS6KB1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15809305] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15314020] [evidence EXP]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1922062] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p70-alpha; p70-S6K; STK14A; S6K1; p70(S6K)-alpha; PS6K; S6K	p70-alpha; p70-S6K; STK14A; S6K1; p70(S6K)-alpha; PS6K; S6K
Homo sapiens	RefSeq	NM_001136498.1	ILMN_371637	CISD3	NM_001136498.1	NM_001136498.1		284106	211057410	NM_001136498.1	CISD3	NP_001129970.1	ILMN_3246724	0003870465	S	794	GGCTGGGGGCACCTGACCAGCCACAGGAGAGGGCAGTTCAGATTCATTCT	17	+	36890016-36890065	17q12c	Homo sapiens CDGSH iron sulfur domain 3 (CISD3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]		Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]		
Homo sapiens	RefSeq	NM_198061.1	ILMN_10017	CES2	NM_003869.4	NM_003869.4		8824	37622884	NM_003869.4	CES2	NP_003860.2	ILMN_1696675	0003520372	A	3808	TCTCTCGTCTGAGCCCCCAGGCCTTTTCCACTTTGAGGGAGGTGCTTCGA	16	+	65536365-65536414	16q22.1a	Homo sapiens carboxylesterase 2 (intestine, liver) (CES2), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9144407] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism [goid 9056] [pmid 9169443] [evidence TAS]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [pmid 9169443] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	iCE; CE-2; CES2A1; PCE-2	iCE; CE-2; CES2A1; PCE-2
Homo sapiens	Unigene	Hs.269011	ILMN_83930	HS.269011	Hs.269011		Hs.269011		3897330	AI275056			ILMN_1887831	0007160408	S	35	TCTGGGGCCATACGAAACAAGCTGTGGGCTGGATTGGACCCGTAGTAGGG	3_random	+	204498-204547		ql72d04.x1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1877863 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001716847.1	ILMN_335946	LOC729195	XM_001716847.1	XM_001716847.1		729195	169194612	XM_001716847.1	LOC729195	XP_001716899.1	ILMN_3298065	0002360162	M	1697	CTGCCTTACTCAGCCCAATCCTTAATGCCACTGATACAAAAGGCTGCACC				10p12.33a	PREDICTED: Homo sapiens similar to apical early endosomal glycoprotein (LOC729195), mRNA.					
Homo sapiens	RefSeq	NM_001031799.1	ILMN_13128	RASGEF1C	NM_001031799.1	NM_001031799.1		255426	73088871	NM_001031799.1	RASGEF1C	NP_001026969.1	ILMN_1763740	0006350133	I	7	AGGCTCACGTGCCCACCCGGCGCCCCTCACGAGCGCGGTGCCCCTCGCTT	5	-	179496129-179496178	5q35.3e	Homo sapiens RasGEF domain family, member 1C (RASGEF1C), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	FLJ35841	FLJ35841
Homo sapiens	RefSeq	XM_936518.1	ILMN_37967	LOC647450	XM_936518.1	XM_936518.1		647450	88956417	XM_936518.1	LOC647450	XP_941611.1	ILMN_1699214	0004220110	S	46	CGCCTGGGGCTCCTGCTGCTCTGGTTCCCAGGTGCCAGATGTGCCATCCG					PREDICTED: Homo sapiens similar to Ig kappa chain V-I region HK101 precursor (LOC647450), mRNA.					
Homo sapiens	RefSeq	NM_003096.2	ILMN_30298	SNRPG	NM_003096.2	NM_003096.2		6637	21359839	NM_003096.2	SNRPG	NP_003087.1	ILMN_1683562	0002940168	S	325	GGCTGTTCAGCAGAGAAACCCATGTCCTCTCTCCATAGGGCCTGTTTTAC	2	-	70508710-70508759	2p14a	Homo sapiens small nuclear ribonucleoprotein polypeptide G (SNRPG), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 7744013] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 7744013] [evidence NAS]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 7744013] [evidence NAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 7744013] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12165861] [evidence IPI]	MGC117317; SMG	SMG; MGC117317
Homo sapiens	RefSeq	NM_020637.1	ILMN_15552	FGF22	NM_020637.1	NM_020637.1		27006	10190671	NM_020637.1	FGF22	NP_065688.1	ILMN_2095633	0006420564	S	340	AGGTTCCGGGAGCGCATCGAAGAGAACGGCCACAACACCTACGCCTCACA	19	+	594431-594480	19p13.3j	Homo sapiens fibroblast growth factor 22 (FGF22), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8622701] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11342227] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 11342227] [evidence NAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Homo sapiens	RefSeq	NM_153028.1	ILMN_3468	ZNF75A	NM_153028.1	NM_153028.1		7627	23308516	NM_153028.1	ZNF75A	NP_694573.1	ILMN_1666552	0007560129	S	1970	GACATCTCTAATGGAATCATGGGGGAAACGGGTTGGAATTTGTAGCCATG	16	+	3308474-3308523	16p13.3c	Homo sapiens zinc finger protein 75a (ZNF75A), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	FLJ31529	FLJ31529
Homo sapiens	RefSeq	XM_930874.1	ILMN_40352	KIAA0692	XM_930874.1	XM_930874.1		23141	89035822	XM_930874.1	KIAA0692	XP_935967.1	ILMN_1667305	0001690739	I	1383	AGCTCCACCTTGACCCAGCCTCACAACAAAAAGTTTGTGTATGACCAGGC	12	-	131828499-131828505:131828506-131828548	12q24.33d	PREDICTED: Homo sapiens KIAA0692 protein, transcript variant 9 (KIAA0692), mRNA.					
Homo sapiens	RefSeq	NM_031461.3	ILMN_25167	CRISPLD1	NM_031461.3	NM_031461.3		83690	52694670	NM_031461.3	CRISPLD1	NP_113649.1	ILMN_1753910	0000270458	S	3443	GGTCCTTACTGCTCCTCCCACAACAGGGAAGCCCGATCAGTTCTGTCAGT	8	+	76108730-76108779	8q21.11b	Homo sapiens cysteine-rich secretory protein LCCL domain containing 1 (CRISPLD1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			CRISP10; DKFZp762F133; LCRISP1	CRISP10; DKFZp762F133; LCRISP1
Homo sapiens	RefSeq	NM_057158.2	ILMN_181455	DUSP4	NM_057158.2	NM_057158.2		1846	21536335	NM_057158.2	DUSP4	NP_476499.1	ILMN_2283398	0002060102	I	1626	TGGGAGAGACTGCAAACCAGTTCGAGCCCCCAGCATGGCGTTAGGTGTCA	8	-	29258850-29258899	8p21.1a	Homo sapiens dual specificity phosphatase 4 (DUSP4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7535768] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 17322878] [evidence EXP]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 7535768] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 7535768] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 17322878] [evidence EXP]; Catalysis of the reaction: protein threonine/tyrosine phosphate + H2O = protein threonine/tyrosine + phosphate [goid 8330] [pmid 7535768] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	HVH2; MKP-2; MKP2; TYP	HVH2; MKP-2; MKP2; TYP
Homo sapiens	RefSeq	NM_001031805.1	ILMN_166643	AFG3L1	NR_003226.1	NR_003226.1		172	115430106	NR_003226.1	AFG3L1		ILMN_1699172	0000730730	I	205	ACCCTGCTTGCTCCAGTGGTTATGGCCAGTGAGAATGTGCGGTGTTGCAT	16	+	88571532-88571581	16q24.3b	Homo sapiens AFG3 ATPase family gene 3-like 1 (S. cerevisiae) (AFG3L1), transcript variant 1, non-coding RNA.			Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ45200; AFG3	FLJ45200; AFG3
Homo sapiens	RefSeq	NM_018091.3	ILMN_1068	ELP3	NM_018091.4	NM_018091.4		55140	142349152	NM_018091.4	ELP3	NP_060561.3	ILMN_1744068	0003440500	S	2927	TCGAGGTAATCTACTTTGGAGACTCTGCCTGGAGAGGGTCAGTTCCTAAG	8	+	28104438-28104487	8p21.1d	Homo sapiens elongation protein 3 homolog (S. cerevisiae) (ELP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11714725] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11818576] [evidence IDA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [pmid 11818576] [evidence IDA]; Large protein complex composed of the RNA polymerase core complex and a variety of other proteins including transcription factor complexes TFIIA, D, E, F, and H which are required for promoter recognition, and the Mediator subcomplex. Catalyzes the synthesis of eukaryotic pre-mRNA [goid 16591] [pmid 11714725] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 11818576] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11714725] [evidence IDA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714725] [evidence IPI]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Modulation of the activity of the enzyme phosphorylase kinase [goid 8607] [pmid 11818576] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule catalyzed by RNA polymerase II following transcription initiation [goid 16944] [pmid 11714725] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	FLJ10422; KAT9	FLJ10422
Homo sapiens	Unigene	Hs.550126	ILMN_110175	HS.550126	Hs.550126		Hs.550126		7938080	AW844097			ILMN_1860518	0007510044	S	514	TGACAAGTGGAAGGAGGGGCAGGAGGGCATTCTAGTCAGAAGGAGCAGCG	11	+	113895577-113895626		RC4-CN0048-120200-012-c10 CN0048 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_927985.1	ILMN_33210	LOC644899	XM_927985.1	XM_927985.1		644899	89058477	XM_927985.1	LOC644899	XP_933078.1	ILMN_1667905	0004640537	S	61	AGCTCTGTGTTCTTCCACGTGGGGCCCAGCCCGGCCGAGCTCATCCTGCA	22	+	16277838-16277887	22q11.1d	PREDICTED: Homo sapiens similar to Telomeric repeat binding factor 2 interacting protein 1 (TRF2-interacting telomeric protein Rap1) (hRap1) (LOC644899), mRNA.					
Homo sapiens	RefSeq	NM_014229.1	ILMN_24011	SLC6A11	NM_014229.1	NM_014229.1		6538	7657586	NM_014229.1	SLC6A11	NP_055044.1	ILMN_1798577	0002680398	S	1920	AGACGCACTTCTGAGCGGCCACCAGCCATCTGGGGCTCTTCTTCCTTTCT	3	+	10928844-10928878:10935014-10935028	3p25.3a	Homo sapiens solute carrier family 6 (neurotransmitter transporter, GABA), member 11 (SLC6A11), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) = gamma-aminobutyric acid(in) + Na+(in) [goid 5332] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: gamma-aminobutyric acid(out) + Na+(out) = gamma-aminobutyric acid(in) + Na+(in) [goid 5332] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	GAT-3; GAT3	GAT-3; GAT3
Homo sapiens	RefSeq	XM_937972.1	ILMN_42551	LOC648894	XM_937972.1	XM_937972.1		648894	89031776	XM_937972.1	LOC648894	XP_943065.1	ILMN_1752917	0000670692	S	108	TCTGAAGGGTCCTAGATCAGCTGTCCTTGCAGGGTGGTCAGCAGGCAGGA					PREDICTED: Homo sapiens similar to aldo-keto reductase family 1, member C-like 1 (LOC648894), mRNA.					
Homo sapiens	RefSeq	XM_001717036.1	ILMN_338629	TTC34	XM_001717036.1	XM_001717036.1		390988	169161713	XM_001717036.1	TTC34	XP_001717088.1	ILMN_3203551	0005490600	A	2026	ATCGCCTACCTGTCTCTGGCCATCTTTGCCGCAGGAAGCCAGGCAAGTGA				1p36.32c	PREDICTED: Homo sapiens tetratricopeptide repeat domain 34 (TTC34), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_032486.2	ILMN_22431	DCTN5	NM_032486.2	NM_032486.2		84516	34147426	NM_032486.2	DCTN5	NP_115875.1	ILMN_1666192	0005130468	S	3010	GTACCCACAGAGACTGAGAGTTGGTGCTGGTGGTTGTGGTGGCAGATGAT	16	+	23588370-23588419	16p12.1c	Homo sapiens dynactin 5 (p25) (DCTN5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC3248; p25	MGC3248; p25
Homo sapiens	RefSeq	NM_207514.1	ILMN_175985	DEF8	NM_207514.1	NM_207514.1		54849	46447819	NM_207514.1	DEF8	NP_997397.1	ILMN_1767509	0005820768	I	3537	ACAGCCGGTAAACGGAATCACGTATGGTTCTTTCTGTGGGTCTGTGGCAC	16	+	88561781-88561830	16q24.3b	Homo sapiens differentially expressed in FDCP 8 homolog (mouse) (DEF8), transcript variant 1, mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC104349	FLJ20186; MGC104349
Homo sapiens	RefSeq	NM_005214.3	ILMN_167471	CTLA4	NM_005214.3	NM_005214.3		1493	83700229	NM_005214.3	CTLA4	NP_005205.2	ILMN_2261627	0001230201	I	624	CGTGCCCAGATTCTGACTTCCTCCTCTGGATCCTTGCAGCAGTTAGTTCG	2	+	204444355-204444404	2q33.2a	Homo sapiens cytotoxic T-lymphocyte-associated protein 4 (CTLA4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3220103] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 3220103] [evidence TAS]		CTLA-4; GSE; CELIAC3; IDDM12; CD152	CTLA-4; GSE; CELIAC3; IDDM12; CD152
Homo sapiens	RefSeq	NM_005214.3	ILMN_167471	CTLA4	NM_005214.3	NM_005214.3		1493	83700229	NM_005214.3	CTLA4	NP_005205.2	ILMN_2348905	0004010768	A	1060	GCATCACTTGGGATTAATATGGGGATGCAGCATTATGATGTGGGTCAAGG	2	+	204446011-204446060	2q33.2a	Homo sapiens cytotoxic T-lymphocyte-associated protein 4 (CTLA4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3220103] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 3220103] [evidence TAS]		CTLA-4; GSE; CELIAC3; IDDM12; CD152	CTLA-4; GSE; CELIAC3; IDDM12; CD152
Homo sapiens	RefSeq	NM_194302.1	ILMN_17258	CCDC108	NM_194302.2	NM_194302.2		255101	83035128	NM_194302.2	CCDC108	NP_919278.2	ILMN_1806488	0002320528	S	5591	TCATGGTGAAGGAGGAGCAAGAACAGGACGAGAAGGAGGCCATCAGAAGG	2	-	219867993-219867994:219868674-219868721	2q35f	Homo sapiens coiled-coil domain containing 108 (CCDC108), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	DKFZp434O0527; MGC35338	
Homo sapiens	Unigene	Hs.363126	ILMN_87524	HS.363126	Hs.363126		Hs.363126		19602306	BM980639			ILMN_1834802	0001050435	S	451	AGCAGCTAGGGGAGCTGGGGGCAGCACTGGCGTTTTCTTGTGAAACTGAC	7	-	77463118-77463167		UI-CF-EN1-add-l-13-0-UI.s1 UI-CF-EN1 Homo sapiens cDNA clone UI-CF-EN1-add-l-13-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001130804.2	ILMN_169809	LOC729619	XM_001130804.2	XM_001130804.2		729619	169169943	XM_001130804.2	LOC729619	XP_001130804.2	ILMN_3246174	0003420382	S	1	ATGAAGATAACCCAGGAAGCCGAGATCCCCCGCGAGGTGATCGAGAGGCT	7	+	2767-2781:12164-12198		PREDICTED: Homo sapiens similar to platelet-derived growth factor alpha polypeptide (LOC729619), partial mRNA.					
Homo sapiens	RefSeq	NM_000071.1	ILMN_5029	CBS	NM_000071.1	NM_000071.1		875	4557414	NM_000071.1	CBS	NP_000062.1	ILMN_1804735	0001230047	S	2420	CTCCCGTCTTCCTCCTCCCCTGGCAACTGCTGATCGACTTTGTGTCTCTG	21	-	43346416-43346465	21q22.3c	Homo sapiens cystathionine-beta-synthase (CBS), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]	The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine [goid 6535] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cysteine, via the intermediate cystathionine [goid 19343] [evidence IEA]	Catalysis of the reaction: L-serine + L-homocysteine = cystathionine + H2O [goid 4122] [pmid 9590298] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HIP4	HIP4
Homo sapiens	RefSeq	NM_003514.2	ILMN_26622	HIST1H2AM	NM_003514.2	NM_003514.2		8336	15718718	NM_003514.2	HIST1H2AM	NP_003505.1	ILMN_1756022	0003120114	S	84	AACCCGCTCCTCTAGAGCTGGGCTCCAATTTCCTGTAGGACGAGTGCACC	6	-	27968809-27968858	6p22.1c	Homo sapiens histone cluster 1, H2am (HIST1H2AM), mRNA.				H2AFN; H2A.1; dJ193B12.1; H2A/n	H2AFN; H2A.1; dJ193B12.1; H2A/n
Homo sapiens	RefSeq	NM_006765.2	ILMN_2352	TUSC3	NM_006765.2	NM_006765.2		7991	30410787	NM_006765.2	TUSC3	NP_006756.2	ILMN_1774689	0002480400	I	1243	CTGGACTTTGAGTGAGAAGATGTGATTTGGACCATGGCACTTAAAAACTC	8	+	15519782-15519805:15524960-15524985	8p22c	Homo sapiens tumor suppressor candidate 3 (TUSC3), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [pmid 15835887] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [pmid 12887896] [evidence TAS]	Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [pmid 12887896] [evidence TAS]	D8S1992; N33; OST3A; MGC13453	D8S1992; N33; OST3A; MGC13453
Homo sapiens	RefSeq	NM_006765.2	ILMN_2352	TUSC3	NM_006765.2	NM_006765.2		7991	30410787	NM_006765.2	TUSC3	NP_006756.2	ILMN_2354547	0003190474	A	985	AAGAACCCACACAATGGACAAGTGAGCTACATTCATGGGAGCAGCCAGGC	8	+	15517016-15517065	8p22c	Homo sapiens tumor suppressor candidate 3 (TUSC3), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A protein complex that is found in the endoplasmic reticulum membrane of eukaryotes and transfers lipid-linked oligosaccharide precursor to asparagine residues on nascent proteins. In yeast, the complex includes at least nine different subunits, whereas in mammalian cells at least three different forms of the complex have been detected [goid 8250] [pmid 15835887] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine forming N4-glycosyl-L-asparagine; the most common form is N-acetylglucosaminyl asparagine; N-acetylgalactosaminyl asparagine also occurs; this modification typically occurs in extracellular peptides with an N-X-(ST) motif. Partial modification has been observed to occur with cysteine, rather than serine or threonine, in the third position; secondary structure features are important, and proline in the second or fourth positions inhibits modification [goid 18279] [pmid 12887896] [evidence TAS]	Catalysis of the reaction: dolichyl diphosphooligosaccharide + protein L-asparagine = dolichyl diphosphate + a glycoprotein with the oligosaccharide chain attached by glycosylamine linkage to protein L-asparagine [goid 4579] [pmid 12887896] [evidence TAS]	D8S1992; N33; OST3A; MGC13453	D8S1992; N33; OST3A; MGC13453
Homo sapiens	RefSeq	NM_004179.1	ILMN_5420	TPH1	NM_004179.1	NM_004179.1		7166	4759247	NM_004179.1	TPH1	NP_004170.1	ILMN_1679115	0001820356	S	885	GGCTTCTCTTGGCGCTTCAGAGGAGGCTGTTCAAAAACTGGCAACGTGCT	11	-	18002102-18002106:18003698-18003742	11p15.1d	Homo sapiens tryptophan hydroxylase 1 (TPH1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The chemical reactions and pathways resulting in the formation from tryptophan of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 6587] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: L-tryptophan + tetrahydrobiopterin + O2 = 5-hydroxy-L-tryptophan + 4-alpha-hydroxytetrahydrobiopterin + H2O [goid 4510] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TPRH; MGC119994; TPH	TPRH; MGC119994; TPH
Homo sapiens	RefSeq	XM_934719.1	ILMN_38373	LOC647322	XM_934719.1	XM_934719.1		647322	88953287	XM_934719.1	LOC647322	XP_939812.1	ILMN_1659627	0000290093	S	928	TCCCCAGCTGTGAAAGGGTTTTCTGCCTCCTGCTAAGCCAATTTATACAT	2	-	87425863-87425877:87425878-87425896:87429293-87429308		PREDICTED: Homo sapiens hypothetical protein LOC647322 (LOC647322), mRNA.					
Homo sapiens	Unigene	Hs.231861	ILMN_82745	HS.231861	Hs.231861		Hs.231861		10435497	AK023536			ILMN_1904135	0004070228	S	1458	GGGACGGTGTAGGGAGGCCATGGTCAACTTTTGAGCTACCCTTGAGGGAA	9	+	68137745-68137794		Homo sapiens cDNA FLJ13474 fis, clone PLACE1003593					
Homo sapiens	RefSeq	XR_039314.1	ILMN_350501	LOC100132324	XR_039314.1	XR_039314.1		100132324	169214520	XR_039314.1	LOC100132324		ILMN_3247781	0001300358	S	996	AGTTCATGCACCCCTTCTTTCCCCAGAGGGGCTGGACTCAGGTGAGTATG	20	-	62391276-62391325	20q13.33e	PREDICTED: Homo sapiens misc_RNA (LOC100132324), miscRNA.					
Homo sapiens	Unigene	Hs.8038	ILMN_71044	HS.8038	Hs.8038		Hs.8038		19029087	BM715829			ILMN_1860963	0002340725	S	551	CCCTTTGAAATGTTCTGGGCAGCACAGCTCCTTGGTCTGCATGGTTGGTG	5	-	179271343-179271392		UI-E-EJ0-ahj-d-03-0-UI.r2 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahj-d-03-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001723862.1	ILMN_350442	LOC100130921	XM_001723862.1	XM_001723862.1		100130921	169163141	XM_001723862.1	LOC100130921	XP_001723914.1	ILMN_3270823	0007510280	M	319	GCGCTCTTGTCCGTGCCCAGAAAGCGGGTTCCACTTGGCAGGGATTATTT	2	+	42575531-42575580	2p21f	PREDICTED: Homo sapiens hypothetical protein LOC100130921 (LOC100130921), mRNA.					
Homo sapiens	RefSeq	NM_001005914.1	ILMN_25666	SEMA3B	NM_001005914.1	NM_001005914.1		7869	54607088	NM_001005914.1	SEMA3B	NP_001005914.1	ILMN_1653501	0000430181	A	2795	CTGGGAGACAGACCCCACCTCCTTGGGTAGTGAGCAGTGAGCAGAAAGCT	3	+	50289448-50289497	3p21.31b	Homo sapiens sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B (SEMA3B), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8633026] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8633026] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 8633026] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ34863; SEMAA; SEMA5; semaV; SemA; LUCA-1	SEMAA; SemA; FLJ34863; SEMA5; semaV; LUCA-1
Homo sapiens	RefSeq	NM_001005914.1	ILMN_25666	SEMA3B	NM_001005914.1	NM_001005914.1		7869	54607088	NM_001005914.1	SEMA3B	NP_001005914.1	ILMN_2406299	0004220433	A	2389	AGTCACTGCCCCTGGAGTCGCGGAGAAAGGGCCGTAACCGGAGGACCCAC	3	+	50289042-50289091	3p21.31b	Homo sapiens sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B (SEMA3B), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8633026] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8633026] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 8633026] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ34863; SEMAA; SEMA5; semaV; SemA; LUCA-1	SEMAA; SemA; FLJ34863; SEMA5; semaV; LUCA-1
Homo sapiens	RefSeq	NM_001040454.1	ILMN_171937	SLC26A6	NM_001040454.1	NM_001040454.1		65010	94721258	NM_001040454.1	SLC26A6	NP_001035544.1	ILMN_2292686	0001340487	I	119	ATCAGGTAGGTAACTCTCTGGTCCTAGGTGGAGGTGTAGGGGAGGTTGGG	3	-	48671111-48671160	3p21.31e	Homo sapiens solute carrier family 26, member 6 (SLC26A6), transcript variant 4, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The collection of axons into a bundle of rods, known as a fascicle [goid 7413] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport [goid 8271] [evidence IEA]	DKFZp586E1422	DKFZp586E1422
Homo sapiens	RefSeq	NM_001001435.2	ILMN_4819	CCL4L1	NM_001001435.2	NM_001001435.2		9560	48949791	NM_001001435.2	CCL4L1	NP_001001435.1	ILMN_2100209	0003520102	S	572	TCTCACTCTTTCTCTGCTGTTGCAAATACATGGATAACACCGTTAATTCC	17	+	31564301-31564350	17q12b	Homo sapiens chemokine (C-C motif) ligand 4-like 1 (CCL4L1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	LAG-1; AT744.2; LAG1; SCYA4L; CCL4L	LAG-1; AT744.2; LAG1; SCYA4L; CCL4L
Homo sapiens	RefSeq	NM_052978.3	ILMN_11039	TRIM9	NM_052978.3	NM_052978.3		114088	46370052	NM_052978.3	TRIM9	NP_443210.1	ILMN_1786697	0000460121	I	3707	ACAGGATTGGAACTGCGATCCTTGGTACCACAGTCACAGAACTGGGGGTC	14	-	50532754-50532803	14q22.1c	Homo sapiens tripartite motif-containing 9 (TRIM9), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SPRING; KIAA0282; RNF91	SPRING; KIAA0282; RNF91
Homo sapiens	RefSeq	NM_014429.2	ILMN_22476	MORC1	NM_014429.2	NM_014429.2		27136	68161547	NM_014429.2	MORC1	NP_055244.2	ILMN_1808970	0005390390	S	3458	GCCCTTTCTCCACTATAGCCAACACTCAGTCAAGCAGAAAATACAAATCC	3	-	110160011-110160060	3q13.13a	Homo sapiens MORC family CW-type zinc finger 1 (MORC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10369865] [evidence TAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 10369865] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZCW6; MORC	ZCW6; MORC
Homo sapiens	RefSeq	NM_003578.2	ILMN_3634	SOAT2	NM_003578.2	NM_003578.2		8435	24475885	NM_003578.2	SOAT2	NP_003569.1	ILMN_1777556	0005870681	S	1718	GCTCTGAGTCGAGGCAACCTGCACACAAGACCCCCACCCAAGGAATGTGC	12	+	51804272-51804321	12q13.13e	Homo sapiens sterol O-acyltransferase 2 (SOAT2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 9756920] [evidence TAS]	Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [pmid 9756920] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ACAT2; MGC116732; ACACT2; ARGP2	ACAT2; MGC116732; ACACT2; ARGP2
Homo sapiens	RefSeq	NR_004394.1	ILMN_352695	RNU6-1	NR_004394.1	NR_004394.1		26827	161087014	NR_004394.1	RNU6-1		ILMN_3308335	0003610279	S	39	TACAGAGAAGATTAGCATGGCCCCTGCGCAAGGATGACACGCAAATTCGT	15	-	68132295-68132344		Homo sapiens RNA, U6 small nuclear 1 (RNU6-1), small nuclear RNA.				U6	U6
Homo sapiens	RefSeq	XM_941942.1	ILMN_35551	LOC652481	XM_941942.1	XM_941942.1		652481	89062863	XM_941942.1	LOC652481	XP_947035.1	ILMN_1708605	0004050270	S	129	GTTACTCGCACGCGGATTTGGCTGGCGTCCCGCGTAAGTATGGGGCCTAG					PREDICTED: Homo sapiens similar to Mitochondrial import inner membrane translocase subunit Tim23 (LOC652481), mRNA.					
Homo sapiens	RefSeq	XM_936670.1	ILMN_31369	LOC647621	XM_936670.1	XM_936670.1		647621	88957342	XM_936670.1	LOC647621	XP_941763.1	ILMN_1705756	0006250717	S	265	TGTGCGCCTCAGTTGGCCTCTGTGCTGTACGCAGGTCCAGTCAGGAGTCC					PREDICTED: Homo sapiens hypothetical protein LOC647621 (LOC647621), mRNA.					
Homo sapiens	RefSeq	XM_001723637.1	ILMN_340484	LOC219347	XM_001723637.1	XM_001723637.1		219347	169184572	XM_001723637.1	LOC219347	XP_001723689.1	ILMN_3240048	0006400273	S	806	AGGGCCTGGAGAGCAGCCAGAGACAAGAAGAGTAGCCCAGGAGGGCACTG					PREDICTED: Homo sapiens hypothetical protein LOC219347 (LOC219347), mRNA.					
Homo sapiens	RefSeq	NM_012120.1	ILMN_30161	CD2AP	NM_012120.2	NM_012120.2		23607	125987597	NM_012120.2	CD2AP	NP_036252.1	ILMN_1730433	0003140646	S	4236	CCTGGTCATCCTAATAATGGGATGAGGGAAGTTTCCAGCAGATTTCAGGC	6	+	47593202-47593251	6p12.3d	Homo sapiens CD2-associated protein (CD2AP), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 10339567] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10339567] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10339567] [evidence TAS]; A two-stranded helical polymer of the protein actin [goid 31941] [pmid 10339567] [evidence IDA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10339567] [evidence TAS]; The formation of a cell surface protrusion, such as a lamellipodium or filopodium, at the leading edge of a migrating cell [goid 6930] [pmid 10339567] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10339567] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 10339567] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12029088] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14679214] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 10339567] [evidence IDA]	DKFZP586H0519; CMS	DKFZP586H0519; CMS
Homo sapiens	RefSeq	NM_006359.1	ILMN_183311	SLC9A6	NM_001042537.1	NM_001042537.1		10479	110227625	NM_001042537.1	SLC9A6	NP_001036002.1	ILMN_1677829	0006860148	S	4160	GGGGAACCAAGCCTGCTGTGCTTACATCAGCATCTGGAAGACTTTCCTCT	X	+	134956527-134956576	Xq26.3b	Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 6 (SLC9A6), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9507001] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9507001] [evidence TAS]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [pmid 9507001] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]	KIAA0267; NHE6	KIAA0267; NHE6
Homo sapiens	RefSeq	NM_001042537.1	ILMN_183311	SLC9A6	NM_001042537.1	NM_001042537.1		10479	110227625	NM_001042537.1	SLC9A6	NP_001036002.1	ILMN_2269619	0006330735	I	511	TGTTAGTGGAAAATTTTATGAGTATATGCTGAAAGGAGAGATTAGTTCAC	X	+	134904720-134904769	Xq26.3b	Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 6 (SLC9A6), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9507001] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9507001] [evidence TAS]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [pmid 9507001] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]	KIAA0267; NHE6	KIAA0267; NHE6
Homo sapiens	RefSeq	NM_001042537.1	ILMN_183311	SLC9A6	NM_001042537.1	NM_001042537.1		10479	110227625	NM_001042537.1	SLC9A6	NP_001036002.1	ILMN_2363097	0005390193	A	4220	GTGTACACATCTCCAAGCAAGGAAGAAAAAACAAACTCTGCTCAGACGCC	X	+	134956587-134956636	Xq26.3b	Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 6 (SLC9A6), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9507001] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9507001] [evidence TAS]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [pmid 9507001] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]	KIAA0267; NHE6	KIAA0267; NHE6
Homo sapiens	RefSeq	XM_932671.1	ILMN_163445	LOC728944	XM_001128859.1	XM_001128859.1		728944	113413602	XM_001128859.1	LOC728944	XP_001128859.1	ILMN_1665601	0005820504	A	1730	CCTTCCACCCGGACACGCGCAAGCCGATGCACAGAGAGTGTGGCTTCATT	2	-	20232-20281		PREDICTED: Homo sapiens similar to THAP domain-containing protein 4 (LOC728944), mRNA.					
Homo sapiens	RefSeq	NM_015963.4	ILMN_163445	LOC728944	XM_001128859.1	XM_001128859.1		728944	113413602	XM_001128859.1	LOC728944	XP_001128859.1	ILMN_1677530	0001470523	S	328	ATCTGCTGTGCGGCCGTGAACTGCTCCAACCGGCAGGGAAAGGGCGAGAA	2	-	54171-54220		PREDICTED: Homo sapiens similar to THAP domain-containing protein 4 (LOC728944), mRNA.					CGI-36
Homo sapiens	RefSeq	NR_002838.1	ILMN_19835	KC6	NR_002838.1	NR_002838.1		641516	84872133	NR_002838.1	KC6		ILMN_3245098	0001170037	S	1330	CCCAAAATTATCGTGTGTCAAAGGCTGGCTGTGGAGCCGATCTTACAACC	18	-	39060568-39060617	18q12.3b	Homo sapiens keratoconus gene 6 (KC6), non-coding RNA.					
Homo sapiens	RefSeq	NM_006874.2	ILMN_1532	ELF2	NM_006874.2	NM_006874.2		1998	42544175	NM_006874.2	ELF2	NP_006865.1	ILMN_1691559	0003130059	A	2727	TGCTGTAACATGCCTGTGTCACTCACTTAGCCTTGGCATTTGTGCAGACA	4	-	140198715-140198764	4q31.1b-q31.1c	Homo sapiens E74-like factor 2 (ets domain transcription factor) (ELF2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14970218] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 14970218] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8756667] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 14970218] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14970218] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14970218] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 14970218] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 8756667] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 14970218] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 14970218] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	NERF; NERF-1A; NERF-2; EU32; NERF-1B; b	NERF; NERF-1A; NERF-2; EU32; NERF-1B; b
Homo sapiens	RefSeq	NM_006874.2	ILMN_1532	ELF2	NM_006874.2	NM_006874.2		1998	42544175	NM_006874.2	ELF2	NP_006865.1	ILMN_1772486	0006380458	I	296	GGATAAACATGGCGACGTCTCTGCATGAGGGACCCACGAACCAGCTGGAT	4	-	140224752-140224794:140224795-140224801	4q31.1b-q31.1c	Homo sapiens E74-like factor 2 (ets domain transcription factor) (ELF2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14970218] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 14970218] [evidence IDA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8756667] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 14970218] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14970218] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14970218] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 14970218] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 8756667] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 14970218] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 14970218] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	NERF; NERF-1A; NERF-2; EU32; NERF-1B; b	NERF; NERF-1A; NERF-2; EU32; NERF-1B; b
Homo sapiens	RefSeq	XM_931928.1	ILMN_37335	LOC642816	XM_931928.1	XM_931928.1		642816	88967388	XM_931928.1	LOC642816	XP_937021.1	ILMN_1799137	0003710328	I	713	GTATGTCTAAACTGGAAAAGTCTTGTAATCTTATGTTCATGGGCGTTTAC	3	+	199397783-199397832		PREDICTED: Homo sapiens similar to hypothetical protein LOC284701, transcript variant 2 (LOC642816), mRNA.					
Homo sapiens	Unigene	Hs.544849	ILMN_108182	HS.544849	Hs.544849		Hs.544849		6640026	AW263210			ILMN_1877647	0006060603	S	162	GGACAAAAGCGAGGATGAGTGCCTGCAGGAGCGCAAAAGGACAAATGGCC	7	-	135554933-135554982		xn79c01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2700672 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020701.1	ILMN_17522	ISY1	NM_020701.1	NM_020701.1		57461	20149303	NM_020701.1	ISY1	NP_065752.1	ILMN_1781099	0007200162	A	1313	CGAACTGGCTGCCTGTGTCTTATTTTGACTTGCACTGCCATTTTGAGGGG	3	-	130331320-130331369	3q21.3c	Homo sapiens ISY1 splicing factor homolog (S. cerevisiae) (ISY1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		KIAA1160	KIAA1160
Homo sapiens	RefSeq	XM_941107.1	ILMN_45738	LOC651850	XM_941107.1	XM_941107.1		651850	89066953	XM_941107.1	LOC651850	XP_946200.1	ILMN_1753283	0004850338	S	36	CCCCTTGCTGACACGATTTTATTCTATACCTTGCCAGTCGGAGCCCCTGC					PREDICTED: Homo sapiens similar to nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (LOC651850), mRNA.					
Homo sapiens	RefSeq	XM_940417.1	ILMN_32373	LOC651289	XM_940417.1	XM_940417.1		651289	88954995	XM_940417.1	LOC651289	XP_945510.1	ILMN_1786729	0003710438	S	146	CGCCAAGCATCCGCCCACTGTCCTCTCGTGACTCGGGCTACTTTGACGCA					PREDICTED: Homo sapiens similar to large subunit ribosomal protein L36a (LOC651289), mRNA.					
Homo sapiens	RefSeq	XM_941280.2	ILMN_32609	LOC648980	XM_941280.2	XM_941280.2		648980	113429375	XM_941280.2	LOC648980	XP_946373.2	ILMN_3275575	0004850403	M	367	CCCTGGGTTTGAAGCAGCCTGGCTTTCTCTTGGTAAGTGGCTGGTGTCTC	22	-	19379800-19379849	22q11.21e	PREDICTED: Homo sapiens similar to breakpoint cluster region, transcript variant 1 (LOC648980), mRNA.					
Homo sapiens	RefSeq	NM_018407.4	ILMN_24436	LAPTM4B	NM_018407.4	NM_018407.4		55353	74271830	NM_018407.4	LAPTM4B	NP_060877.3	ILMN_1680196	0006650348	S	1732	CTGACTGTTCTTGTGGATCTTGTGTCCAGGGACATGGGGTGACATGCCTC	8	+	98863796-98863845	8q22.1e	Homo sapiens lysosomal protein transmembrane 4 beta (LAPTM4B), mRNA.	A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		LAPTM4beta; LC27	LAPTM4beta; LC27
Homo sapiens	RefSeq	NM_018407.4	ILMN_24436	LAPTM4B	NM_018407.4	NM_018407.4		55353	74271830	NM_018407.4	LAPTM4B	NP_060877.3	ILMN_2101832	0000580132	S	1792	GAGGGTGGAATGGATGTGTTTGGCGCTGCATGGGATCTGGTGCCCCTCTT	8	+	98863856-98863905	8q22.1e	Homo sapiens lysosomal protein transmembrane 4 beta (LAPTM4B), mRNA.	A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		LAPTM4beta; LC27	LAPTM4beta; LC27
Homo sapiens	RefSeq	NM_023005.2	ILMN_16290	BAZ1B	NM_023005.2	NM_023005.2		9031	14670389	NM_023005.2	BAZ1B	NP_075381.2	ILMN_1696692	0002060739	I	6	GCCGGGCCCGGGGGAGGAGGGGAATCTCCCGCCATTTTTCAATAATTTCC	7	-	72574496-72574545	7q11.23a	Homo sapiens bromodomain adjacent to zinc finger domain, 1B (BAZ1B), transcript variant 1, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11124022] [evidence NAS]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 11124022] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11124022] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16514417] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11124022] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	WBSCR9; WBSCR10; WSTF	WBSCR9; WBSCR10; WSTF
Homo sapiens	RefSeq	NM_023005.2	ILMN_16290	BAZ1B	NM_023005.2	NM_023005.2		9031	14670389	NM_023005.2	BAZ1B	NP_075381.2	ILMN_1680831	0004280347	A	5731	TTAAACTGCGGAATGTGGCCTCTGCTTCCTCCGTCCTCCTGCCCAAGGAC	7	-	72492966-72493015	7q11.23a	Homo sapiens bromodomain adjacent to zinc finger domain, 1B (BAZ1B), transcript variant 1, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11124022] [evidence NAS]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 11124022] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11124022] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16514417] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11124022] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	WBSCR9; WBSCR10; WSTF	WBSCR9; WBSCR10; WSTF
Homo sapiens	RefSeq	NM_002220.1	ILMN_6608	ITPKA	NM_002220.1	NM_002220.1		3706	4504788	NM_002220.1	ITPKA	NP_002211.1	ILMN_1776516	0006560546	S	1718	GACCTTCCGGTCTAACGTCTCACACCACGACGGACTCCCCTTCCTAATAA	15	+	39582984-39583033	15q15.1c	Homo sapiens inositol 1,4,5-trisphosphate 3-kinase A (ITPKA), mRNA.		The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2176078] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1847047] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5-trisphosphate = ADP + 1D-myo-inositol 1,3,4,5-tetrakisphosphate [goid 8440] [pmid 1654894] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	IP3KA	IP3KA
Homo sapiens	RefSeq	NM_004744.3	ILMN_29431	LRAT	NM_004744.3	NM_004744.3		9227	46359072	NM_004744.3	LRAT	NP_004735.2	ILMN_1673491	0000610274	S	4118	ACATGGAACTGCACAGGGCATTCAGGCAAGTGCAAGTGGTTCAGGGGCCA	4	+	155673500-155673549	4q32.1a	Homo sapiens lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase) (LRAT), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving any of the vitamin A compounds, retinol, retinal (retinaldehyde) and retinoic acid, all of which are derivatives of beta-carotene [goid 6776] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: retinol-[cellular-retinol-binding-protein] + phosphatidylcholine = retinyl-ester-[cellular-retinol-binding-protein] + 2-acylglycerophosphocholine [goid 47173] [evidence IEA]	MGC33103	MGC33103
Homo sapiens	Unigene	Hs.121070	ILMN_75692	HS.121070	Hs.121070		Hs.121070		31673964	BX476711			ILMN_1903077	0003460114	S	294	GGCTCAAGGGGAAACCTATGTAGTATGTAACACAGGACGCTCACAGGAGG	7	+	148512429-148512478		DKFZp686M05188_r1 686 (synonym: hlcc3) Homo sapiens cDNA clone DKFZp686M05188 5, mRNA sequence					
Homo sapiens	RefSeq	NM_014733.2	ILMN_25838	ZFYVE16	NM_014733.2	NM_014733.2		9765	41281465	NM_014733.2	ZFYVE16	NP_055548.2	ILMN_2140999	0001400603	S	5858	CCTCTTTACTTCAAACAGCAAAAAAGTGGGGGGCATATTGTAGTCCTGTC	5	+	79810058-79810107	5q14.1e	Homo sapiens zinc finger, FYVE domain containing 16 (ZFYVE16), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [pmid 17356069] [evidence EXP]	The process of directing proteins towards the lysosome using signals contained within the protein [goid 6622] [pmid 11546807] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11546807] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [pmid 11546807] [evidence NAS]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [pmid 11546807] [evidence IMP]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [pmid 11546807] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14613930] [evidence IPI]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [pmid 11546807] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 11546807] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0305; DKFZp686E13162; ENDOFIN	KIAA0305; DKFZp686E13162; ENDOFIN
Homo sapiens	RefSeq	NM_014733.2	ILMN_25838	ZFYVE16	NM_014733.2	NM_014733.2		9765	41281465	NM_014733.2	ZFYVE16	NP_055548.2	ILMN_1651769	0001230112	S	5570	CCACTGTATTTACCACTTCTAAGAGTGACTGACGACGGGCCAGATGACCC	5	+	79809770-79809819	5q14.1e	Homo sapiens zinc finger, FYVE domain containing 16 (ZFYVE16), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [pmid 17356069] [evidence EXP]	The process of directing proteins towards the lysosome using signals contained within the protein [goid 6622] [pmid 11546807] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11546807] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a vesicle [goid 16050] [pmid 11546807] [evidence NAS]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [pmid 11546807] [evidence IMP]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [pmid 11546807] [evidence TAS]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14613930] [evidence IPI]; Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [pmid 11546807] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 11546807] [evidence IMP]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0305; DKFZp686E13162; ENDOFIN	KIAA0305; DKFZp686E13162; ENDOFIN
Homo sapiens	RefSeq	NM_001249.1	ILMN_29754	ENTPD5	NM_001249.1	NM_001249.1		957	4557426	NM_001249.1	ENTPD5	NP_001240.1	ILMN_1745849	0002760608	S	1682	GCCTAACCACTCAAGAGTACACAGCTGGCACCAGAGCATCACAGAGAGCC	14	-	73503185-73503234	14q24.3a	Homo sapiens ectonucleoside triphosphate diphosphohydrolase 5 (ENTPD5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleotide + phosphate [goid 17110] [evidence IEA]	NTPDase-5; MGC163357; PCPH; CD39L4; MGC163359	NTPDase-5; MGC163357; PCPH; CD39L4; MGC163359
Homo sapiens	RefSeq	NM_032141.2	ILMN_4238	CCDC55	NM_032141.2	NM_032141.2		84081	75677366	NM_032141.2	CCDC55	NP_115517.1	ILMN_1702541	0007050671	A	2056	TTTGGGAGGCCAAGGCAGAAGGATATTGAGGCTAGGCATTCAAGACCAGC	17	+	25537169-25537218	17q11.2c	Homo sapiens coiled-coil domain containing 55 (CCDC55), transcript variant 1, mRNA.	A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 11256614] [evidence IDA]			HSPC095; FLJ37233; DKFZP434K1421	HSPC095; FLJ37233; DKFZP434K1421
Homo sapiens	RefSeq	NM_002873.1	ILMN_12450	RAD17	NM_002873.1	NM_002873.1		5884	4506382	NM_002873.1	RAD17	NP_002864.1	ILMN_1770282	0000290079	I	102	TGTGTGCCTCCAAACTGTAAAGTAGTCCAGTATACTTTCCAATGTATAAG	5	+	68666633-68666682	5q13.2a	Homo sapiens RAD17 homolog (S. pombe) (RAD17), transcript variant 8, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9660800] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	A signal transduction based surveillance mechanism that prevents the initiation of mitosis until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome [goid 76] [pmid 9660800] [evidence TAS]; A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [pmid 15538388] [evidence IMP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9660800] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 15538388] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [pmid 14657349] [evidence IMP]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [pmid 14657349] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10884395] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15538388] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	Rad24; R24L; HRAD17; RAD17Sp; CCYC	Rad24; R24L; HRAD17; RAD17Sp; CCYC
Homo sapiens	RefSeq	XM_001714341.1	ILMN_340680	UBTFL5	XM_001714341.1	XM_001714341.1		728231	169163305	XM_001714341.1	UBTFL5	XP_001714393.1	ILMN_3240182	0002120400	S	1032	GGATCATTACAAGAGCCAGGCTGAGTTGCTGCAGAAGGAATACAAAGTGG	2	-	95480114-95480163	2q11.1c	PREDICTED: Homo sapiens upstream binding transcription factor, RNA polymerase I-like 5 (UBTFL5), mRNA.					
Homo sapiens	RefSeq	XM_942106.1	ILMN_31491	LOC652585	XM_942106.1	XM_942106.1		652585	88971377	XM_942106.1	LOC652585	XP_947199.1	ILMN_1718258	0004180128	S	383	GGCTCCGCATCCATCGTAGTACAAACACTATGCCTTTGGAGAGGACTGCC					PREDICTED: Homo sapiens hypothetical protein LOC652585 (LOC652585), mRNA.					
Homo sapiens	RefSeq	NM_201403.1	ILMN_12281	MOBKL2C	NM_145279.4	NM_145279.4		148932	134142060	NM_145279.4	MOBKL2C	NP_660322.2	ILMN_1798288	0007560471	A	2617	CAGAGGCTGTGGAGCGAGGGTAGTAGGAGCTTTTCCCAGAGTGCTGTGAC	1	-	47073524-47073573	1p33d	Homo sapiens MOB1, Mps One Binder kinase activator-like 2C (yeast) (MOBKL2C), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	MOB3C; MGC26743	MOB3C; MGC26743
Homo sapiens	RefSeq	XM_928758.1	ILMN_44014	LOC653665	XM_928758.1	XM_928758.1		653665	89030867	XM_928758.1	LOC653665	XP_933851.1	ILMN_1672197	0003180768	S	2	TGGCTACAGACTGGAATCTTCTGGAAGCACTTTCACTTGTATGCCTTGTG	10	-	29230292-29230341	10p11.23c	PREDICTED: Homo sapiens similar to 60S ribosomal protein L21 (LOC653665), mRNA.					
Homo sapiens	RefSeq	NM_021210.2	ILMN_8184	TRAPPC1	NM_021210.3	NM_021210.3		58485	142352386	NM_021210.3	TRAPPC1	NP_067033.1	ILMN_1716913	0003420671	S	688	TGATGCTCTCCTCCTACCAGAGTGAAGCCCACAGAGTCCCTCCACCTCCA	17	-	7833740-7833789	17p13.1d	Homo sapiens trafficking protein particle complex 1 (TRAPPC1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [evidence IEA]	The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		BET5; MUM2	BET5; MUM2
Homo sapiens	RefSeq	NM_025108.1	ILMN_21011	C16ORF59	NM_025108.2	NM_025108.2		80178	84626579	NM_025108.2	C16orf59	NP_079384.2	ILMN_1656452	0006560725	S	1451	AGGTGGCCTCACTGGCTCTTCTCAGGACAACTAAGCCTGCTGGTCAGGGC	16	+	2454788-2454837	16p13.3d	Homo sapiens chromosome 16 open reading frame 59 (C16orf59), mRNA.				FLJ13909	
Homo sapiens	RefSeq	XM_929778.1	ILMN_38554	LOC644343	XM_929778.1	XM_929778.1		644343	88943891	XM_929778.1	LOC644343	XP_934871.1	ILMN_1658585	0002710598	S	61	AAAGATAAGGATGAACCACGGTGAAAAATTGGGGAGGTTCTTCTAGTTGA	1	+	234956602-234956651		PREDICTED: Homo sapiens hypothetical protein LOC644343 (LOC644343), mRNA.					
Homo sapiens	RefSeq	XR_018617.1	ILMN_163066	LOC341230	XR_018617.1	XR_018617.1		341230	113423097	XR_018617.1	LOC341230		ILMN_3209070	0002690538	A	848	CGGGCCCCAGCAGGCACCATCCTTTGCTACGCTCATTTAGACATCGAGGC				11q22.3c	PREDICTED: Homo sapiens misc_RNA (LOC341230), miscRNA.					
Homo sapiens	RefSeq	XR_018617.1	ILMN_163066	LOC341230	XR_018617.1	XR_018617.1		341230	113423097	XR_018617.1	LOC341230		ILMN_3285580	0001410491	M	1091	TTGGCTGGGAGTGCCCCACTGTCTACAACGAGGAGCCGGTGAGCATGAAC				11q22.3c	PREDICTED: Homo sapiens misc_RNA (LOC341230), miscRNA.					
Homo sapiens	RefSeq	NM_007348.2	ILMN_18052	ATF6	NM_007348.2	NM_007348.2		22926	56786156	NM_007348.2	ATF6	NP_031374.2	ILMN_1703471	0005420343	S	2293	TGTTTCTTCAGTGGCAAATGTAGCCCTGCATCCTCCAGTGTTACCTGGTG	1	+	160195281-160195330	1q23.3b	Homo sapiens activating transcription factor 6 (ATF6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10564271] [evidence TAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 10866666] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10866666] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10564271] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10564271] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 10564271] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The activation of genes whose promoters contain a specific sequence elements such as the unfolded protein response element (UPRE; consensus CAGCGTG) or the ER stress-response element (ERSE; CCAAN(N)9CCACG), as a result of signaling via the unfolded protein response [goid 6990] [pmid 9837962] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9271374] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10564271] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9271374] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9271374] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10866666] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]		
Homo sapiens	RefSeq	NM_013439.2	ILMN_28071	PILRA	NM_013439.2	NM_013439.2		29992	30179908	NM_013439.2	PILRA	NP_038467.2	ILMN_2241953	0005420672	I	737	AACCGGCCTCAGGGTCACACAGGGCAAACGACGCTCAGACTCTTGGCACA	7	+	99825517-99825566	7q22.1c	Homo sapiens paired immunoglobin-like type 2 receptor alpha (PILRA), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10903717] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	FDF03	FDF03
Homo sapiens	RefSeq	NM_173575.2	ILMN_482	STK32C	NM_173575.2	NM_173575.2		282974	32455268	NM_173575.2	STK32C	NP_775846.2	ILMN_1672302	0003830670	S	1998	TCTTGGAGGTCAAGGGCATGGGTTGGGGTAGTGGGTGGGGAGGTGAATGT	10	-	134021067-134021116	10q26.3e	Homo sapiens serine/threonine kinase 32C (STK32C), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	YANK3; MGC23665; PKE; RP11-140A10.1	YANK3; RP11-140A10.1; MGC23665; PKE
Homo sapiens	RefSeq	NR_030229.1	ILMN_387927	MIR504	NR_030229.1	NR_030229.1		574507	262205492	NR_030229.1	MIR504		ILMN_3309869	0002070431	S	23	TGCACTCTATCTGTATTCTTACTGAAGGGAGTGCAGGGCAGGGTTTCCCA				Xq26.3d	Homo sapiens microRNA 504 (MIR504), microRNA.					
Homo sapiens	RefSeq	NM_007332.1	ILMN_7264	TRPA1	NM_007332.2	NM_007332.2		8989	116534989	NM_007332.2	TRPA1	NP_015628.2	ILMN_1656371	0004780167	S	4754	GGACTTTTCTAGAGATGGACAGCTTGGTTACCTCCACCTTCCTGCACTCA	8	-	73096426-73096475	8q13.3c-q13.3d	Homo sapiens transient receptor potential cation channel, subfamily A, member 1 (TRPA1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10066796] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 10066796] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism [goid 9409] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a temperature stimulus, convert it to a molecular signal, and recognize and characterize the signal. Thermoception in larger animals is mainly done in the skin; mammals have at least two types of sensor, for detecting heat (temperatures above body temperature) and cold (temperatures below body temperature) [goid 50955] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [pmid 10066796] [evidence TAS]	ANKTM1	ANKTM1
Homo sapiens	RefSeq	XM_930963.1	ILMN_30766	LOC653086	XM_930963.1	XM_930963.1		653086	88953540	XM_930963.1	LOC653086	XP_936056.1	ILMN_1667500	0007040112	I	1380	GGTGTGCTCTGGTATGTAATGACAATATGTGAACAAACCTGTGGAATTAA	2	-	112886366-112886415		PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 6 (LOC653086), mRNA.					
Homo sapiens	RefSeq	XM_928445.1	ILMN_138483	LOC643365	XM_928445.1	XM_928445.1		643365	89036859	XM_928445.1	LOC643365	XP_933538.1	ILMN_1656842	0000360458	A	776	CCAGCCGCTGCTCTGGGGCCTGCACAGAGGGCTTGGGCCCAGCACCTGGA	13	-	113491347-113491396	13q34d	PREDICTED: Homo sapiens hypothetical protein LOC643364, transcript variant 1 (LOC643365), mRNA.					
Homo sapiens	RefSeq	XM_001719046.1	ILMN_350335	LOC100130218	XM_001719046.1	XM_001719046.1		100130218	169208975	XM_001719046.1	LOC100130218	XP_001719098.1	ILMN_3270706	0004880398	M	1031	GCCTTTAGCAACACGATCCGAGCCCTGCAACTTTTCGACCTCATTTTGAG				15q21.1d	PREDICTED: Homo sapiens hypothetical protein LOC100130218 (LOC100130218), mRNA.					
Homo sapiens	RefSeq	NM_001008571.1	ILMN_26393	TRMU	NM_018006.4	NM_018006.4		55687	83281442	NM_018006.4	TRMU	NP_060476.2	ILMN_1733703	0003420097	A	1646	TAGAAGGAACCTGGAGAGCAGGACCCATGGCTGGGCGGCTGGTGAGCAGT	22	+	45131583-45131632	22q13.31d	Homo sapiens tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase (TRMU), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence NAS]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 5-methylaminomethyl-2-thiouridylate [goid 4808] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC99627; TRMT; TRNT1; TRMT1; MTO2; MTU1	MGC99627; TRMT; TRMT1; MTO2; MTU1
Homo sapiens	RefSeq	NM_002158.2	ILMN_167513	FOXN2	NM_002158.3	NM_002158.3		3344	116008438	NM_002158.3	FOXN2	NP_002149.2	ILMN_1736510	0006020612	S	5268	ACTGCCAGTAGATGACCAGTCACAAGTGAACCACTTCTCAGTTGCCAATC	2	+	48459743-48459792	2p16.3d	Homo sapiens forkhead box N2 (FOXN2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1639393] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HTLF	FOXN2
Homo sapiens	RefSeq	NM_052929.1	ILMN_363972	FHAD1	NM_052929.1	NM_052929.1		114827	190341067	NM_052929.1	FHAD1	NP_443161.1	ILMN_3236432	0005420605	S	4709	CAGACTCACACTTGAGAAAACCTAAGACTTGTACTGGAGCCTCAGGGCAG	1	+	15724241-15724290	1p36.21a	Homo sapiens forkhead-associated (FHA) phosphopeptide binding domain 1 (FHAD1), mRNA.					
Homo sapiens	RefSeq	XM_945290.1	ILMN_34380	LOC652213	XM_945290.1	XM_945290.1		652213	88999142	XM_945290.1	LOC652213	XP_950383.1	ILMN_1810528	0002070333	S	396	ATGCCAGCCGAGCGCTCGGGAATCTGGGGCTCCAGGCGACCCCGAGCGGC					PREDICTED: Homo sapiens hypothetical protein LOC652213 (LOC652213), mRNA.					
Homo sapiens	RefSeq	NM_016948.1	ILMN_24130	PARD6A	NM_001037281.1	NM_001037281.1		50855	82659096	NM_001037281.1	PARD6A	NP_001032358.1	ILMN_1654112	0000460086	S	1157	CACACTGCTGGGACATGGCAGGGACTTCACAGTGGGGGTTTTTAGCTGGC	16	+	66254079-66254128	16q22.1b	Homo sapiens par-6 partitioning defective 6 homolog alpha (C. elegans) (PARD6A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which a virus reproduces. Usually, this is by infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle [goid 16032] [pmid 9482110] [evidence TAS]; The maintenance of junctions between cells [goid 45217] [evidence IEA]; The maintenance of junctions between cells [goid 45217] [evidence ISS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 9482110] [evidence TAS]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence ISS]	TAX40; PAR6C; TIP-40; PAR6alpha; PAR-6A; PAR6	TAX40; PAR6C; PAR-6; TIP-40; PAR6alpha; PAR-6A; PAR6
Homo sapiens	RefSeq	NM_007035.3	ILMN_179860	KERA	NM_007035.3	NM_007035.3		11081	62865891	NM_007035.3	KERA	NP_008966.1	ILMN_2151304	0004890390	S	2153	GCTGTTGGTGGTACAAGTTTGATATTTAGCTTGAGAATGGGTATGGAATG	12	-	91444598-91444647	12q21.33c	Homo sapiens keratocan (KERA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10802664] [evidence NAS]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLRR2B; CNA2	SLRR2B; CNA2
Homo sapiens	RefSeq	XM_935698.1	ILMN_45069	LOC641938	XM_935698.1	XM_935698.1		641938	89026813	XM_935698.1	LOC641938	XP_940791.1	ILMN_1666278	0004860497	S	61	TTGATGTCCTCGAATTTCATCTTAATGAAGCTGACACCCTTCAGCTTATC					PREDICTED: Homo sapiens hypothetical protein LOC641938 (LOC641938), mRNA.					
Homo sapiens	RefSeq	NM_182682.2	ILMN_179729	UBE2G1	NM_003342.4	NM_003342.4		7326	75992937	NM_003342.4	UBE2G1	NP_003333.1	ILMN_1719039	0000150630	A	3881	TTGATATGCCCACTCACCCTCGACGAATCTGCCCGCTTTGGGCTGTGGTG	17	-	4173193-4173242	17p13.2c	Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) (UBE2G1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8893823] [evidence TAS]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBE2G; UBC7; E217K	UBE2G; UBC7; E217K
Homo sapiens	RefSeq	NM_003342.4	ILMN_179729	UBE2G1	NM_003342.4	NM_003342.4		7326	75992937	NM_003342.4	UBE2G1	NP_003333.1	ILMN_1814465	0003180181	I	735	CTATGCTGGCAGACCCTAATGGAGACTCACCTGCTAATGTTGATGCTGCG	17	-	4216338-4216360:4216361-4216387	17p13.2c	Homo sapiens ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) (UBE2G1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8893823] [evidence TAS]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBE2G; UBC7; E217K	UBE2G; UBC7; E217K
Homo sapiens	RefSeq	XM_496966.2	ILMN_137006	LOC389631	XM_496966.2	XM_496966.2		389631	89027915	XM_496966.2	LOC389631	XP_496966.2	ILMN_1726394	0002360746	S	318	CCACCAGTATGACAATGGAGAACTCTCATTCTGGAGGATCCTTTTGAATA	8	+	12259622-12259638:12260693-12260722:12260723-12260725	8p23.1a	PREDICTED: Homo sapiens similar to zinc finger protein 75 (LOC389631), mRNA.					
Homo sapiens	RefSeq	NM_006114.1	ILMN_29459	TOMM40	NM_006114.1	NM_006114.1		10452	5174722	NM_006114.1	TOMM40	NP_006105.1	ILMN_1683475	0001740494	S	1560	GTCAGTCCACCCTGCCCCGTCCACTTTCCCATCTCCTCGGTATAAATCAT	19	+	50098656-50098705	19q13.32a	Homo sapiens translocase of outer mitochondrial membrane 40 homolog (yeast) (TOMM40), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Soluble complex of the mitochondrial intermembrane space composed of various combinations of small Tim proteins; acts as a protein transporter to guide proteins to the Tim22 complex for insertion into the mitochondrial inner membrane [goid 42719] [pmid 15644312] [evidence IDA]	The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of a protein from the cytoplasm to the mitochondrion [goid 43681] [pmid 15644312] [evidence IMP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]	PER-EC1; C19orf1; PEREC1; D19S1177E; TOM40	PER-EC1; C19orf1; PEREC1; D19S1177E; TOM40
Homo sapiens	RefSeq	NR_003954.1	ILMN_351611	LOC729176	NR_003954.1	NR_003954.1		729176	158262056	NR_003954.1	LOC729176		ILMN_3243233	0007330324	S	1584	CCATCTTTGAGGATAGATTCCCAATACTGCATTTTAGGGGGATTTTAGGG	6	-	147165020-147165069	6q24.3b	Homo sapiens chromosome 15 open reading frame 29 pseudogene (LOC729176), non-coding RNA.					
Homo sapiens	RefSeq	XM_937610.1	ILMN_45434	LOC648556	XM_937610.1	XM_937610.1		648556	89041057	XM_937610.1	LOC648556	XP_942703.1	ILMN_1771036	0004290747	S	90	CAACGGCCCATCCGGCAGCGACCTGAGTAGCTCTTGCCAAAACTGTGTCA					PREDICTED: Homo sapiens hypothetical protein LOC648556 (LOC648556), mRNA.					
Homo sapiens	RefSeq	NM_001004479.1	ILMN_28833	OR11H4	NM_001004479.1	NM_001004479.1		390442	52218849	NM_001004479.1	OR11H4	NP_001004479.1	ILMN_1788855	0005900292	S	573	GGACCCATTGATGGCTCTATCCTGTGCCCCAGCTCCCATAACTGAATGTA	14	+	19781363-19781412	14q11.2b	Homo sapiens olfactory receptor, family 11, subfamily H, member 4 (OR11H4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR14-36	OR14-36
Homo sapiens	Unigene	Hs.126651	ILMN_76300	HS.126651	Hs.126651		Hs.126651		3753393	AI200787			ILMN_1847645	0002140731	S	117	CTTGAGCACCAATCAGCGTGACTCCACTTTCATCAAACCCACCATGCAGC	3	-	103928984-103929033		qf67d12.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1755095 3, mRNA sequence					
Homo sapiens	RefSeq	XM_939160.1	ILMN_40839	LOC650074	XM_939160.1	XM_939160.1		650074	89040925	XM_939160.1	LOC650074	XP_944253.1	ILMN_1664146	0006380592	S	53	GGCATGCAGCTGGACAACCGCCCCTCCTTTATCCCAACGAAAGACCTGGA					PREDICTED: Homo sapiens hypothetical protein LOC650074 (LOC650074), mRNA.					
Homo sapiens	RefSeq	NM_138328.2	ILMN_7496	RHBDL3	NM_138328.2	NM_138328.2		162494	75750481	NM_138328.2	RHBDL3	NP_612201.1	ILMN_1716019	0003370725	S	4467	CGGTTCTCCTCTGCCTTAAAAACAGTGCCCAACAGTGAACTGCCCCTCCG	17	+	27675599-27675648	17q11.2d	Homo sapiens rhomboid, veinlet-like 3 (Drosophila) (RHBDL3), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	RHBDL4; FLJ45582; MGC119300; MGC119301; VRHO	RHBDL4; FLJ45582; MGC119300; MGC119301; VRHO
Homo sapiens	RefSeq	NM_004561.2	ILMN_14373	OVOL1	NM_004561.2	NM_004561.2		5017	38570157	NM_004561.2	OVOL1	NP_004552.2	ILMN_1692936	0000840349	A	2627	GCCAAACCCCACCTGAAGCAGAACCACTTTGGCCTCCCCTGCCCAAAATG	11	+	65320895-65320944	11q13.1d	Homo sapiens ovo-like 1(Drosophila) (OVOL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Progression through the third stage of prophase I in meiosis, in which crossing over occurs between a chromatid in one partner and another chromatid in the homologous chromosome [goid 239] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence NAS]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HOVO1	HOVO1
Homo sapiens	RefSeq	NM_153254.1	ILMN_9507	TTLL10	NM_153254.1	NM_153254.1		254173	23397543	NM_153254.1	TTLL10	NP_694986.1	ILMN_1799329	0003140161	S	2014	GGACGGCAGCGCTCAGAGGAGCCTCCAGTTACTTTCCTCACATCTCCCAA	1	+	1111007-1111056	1p36.33b	Homo sapiens tubulin tyrosine ligase-like family, member 10 (TTLL10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ36119; RP5-902P8.1; FLJ42131; TTLL5	FLJ36119; RP5-902P8.1; FLJ42131; TTLL5
Homo sapiens	RefSeq	NM_057091.1	ILMN_20917	ARTN	NM_057091.1	NM_057091.1		9048	16950642	NM_057091.1	ARTN	NP_476432.1	ILMN_1762952	0001850246	I	665	AGCACTGGTCCCCGGAAAGGTGCCTAGAAGAACAAGGTGCAGGACCCCGT	1	+	44172469-44172518	1p34.1f	Homo sapiens artemin (ARTN), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9883723] [evidence TAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [pmid 9883723] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	EVN; NBN	EVN; NBN
Homo sapiens	RefSeq	NM_003976.2	ILMN_20917	ARTN	NM_057091.1	NM_057091.1		9048	16950642	NM_057091.1	ARTN	NP_476432.1	ILMN_1803691	0006560494	A	1651	TCCCAGCCTAAAAGACACCAGAGACCTCAGCTATGGAGCCCTTCGGACCC	1	+	44175230-44175279	1p34.1f	Homo sapiens artemin (ARTN), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9883723] [evidence TAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [pmid 9883723] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	EVN; NBN	EVN; NBN
Homo sapiens	RefSeq	NM_021058.3	ILMN_8652	HIST1H2BJ	NM_021058.3	NM_021058.3		8970	20336753	NM_021058.3	HIST1H2BJ	NP_066402.2	ILMN_1658702	0006290685	S	28	TTTATAGCTACACAGTGCTATGCCAGAGCCAGCGAAGTCTGCTCCCGCCC	6	-	27208477-27208508:27208509-27208526	6p22.1c	Homo sapiens histone cluster 1, H2bj (HIST1H2BJ), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [pmid 6647026] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 6647026] [evidence NAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 6647026] [evidence NAS]	H2B/r; H2BFR	H2B/r; H2BFR
Homo sapiens	Unigene	Hs.562205	ILMN_115367	HS.562205	Hs.562205		Hs.562205		8359924	BE042871			ILMN_1881780	0007560259	S	196	TGCACAGGGTGGATTATAGGGTGGATGAGAGGCATGGAACCCGAACTGGT	1	+	44180509-44180558		ho30a11.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3038876 3, mRNA sequence					
Homo sapiens	Unigene	Hs.580960	ILMN_133141	HS.580960	Hs.580960		Hs.580960		1108226	H55360			ILMN_1897914	0006620605	S	110	ATCCACGTAGCTCTCCGCAGGCCCACAGGCAAAGTCTCACTCTGTCACCC	22	-	46713215-46713238:46715009-46715034		CHR220299 Chromosome 22 exon Homo sapiens cDNA clone C22_374 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001721828.1	ILMN_337616	LOC100129291	XM_001721828.1	XM_001721828.1		100129291	169216649	XM_001721828.1	LOC100129291	XP_001721880.1	ILMN_3256017	0006620376	M	457	TGACTGGCAGCCACCTGTCCATCCCCCAAGACCGGAAAGGCAGCAATAGC	X	-	70800793-70800842	Xq13.1d	PREDICTED: Homo sapiens hypothetical protein LOC100129291 (LOC100129291), mRNA.					
Homo sapiens	RefSeq	NM_003667.2	ILMN_20455	LGR5	NM_003667.2	NM_003667.2		8549	24475886	NM_003667.2	LGR5	NP_003658.1	ILMN_1702310	0007150403	S	2662	ACCAGCTCCAGCATCACTTATGACCTGCCTCCCAGTTCCGTGCCATCACC	12	+	70264671-70264720	12q21.1a	Homo sapiens leucine-rich repeat-containing G protein-coupled receptor 5 (LGR5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9642114] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9642114] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]	HG38; GPR67; GPR49; MGC117008; GRP49; FEX	GPR67; MGC117008; FEX; HG38; GPR49; GRP49
Homo sapiens	RefSeq	NM_006922.3	ILMN_538	SCN3A	NM_006922.3	NM_006922.3		6328	126362948	NM_006922.3	SCN3A	NP_008853.3	ILMN_2387395	0004260102	A	6711	ACCAGCTGACACTGCTGAGGAGAAACCCAATGGCTACCTAGACTATAGGG	2	-	165946394-165946443	2q24.3c	Homo sapiens sodium channel, voltage-gated, type III, alpha subunit (SCN3A), transcript variant 1, mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 9589372] [evidence NAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 9589372] [evidence NAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	Nav1.3; KIAA1356; NAC3	NAC3
Homo sapiens	RefSeq	NM_006922.3	ILMN_538	SCN3A	NM_006922.3	NM_006922.3		6328	126362948	NM_006922.3	SCN3A	NP_008853.3	ILMN_2283293	0003170747	I	2462	TGGGTGGACCTTCAGCTCTAACGTCACCTACTGGACAACTTCCCCCAGAG	2	-	165996118-165996118:165997161-165997209	2q24.3c	Homo sapiens sodium channel, voltage-gated, type III, alpha subunit (SCN3A), transcript variant 1, mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 9589372] [evidence NAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 9589372] [evidence NAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	Nav1.3; KIAA1356; NAC3	NAC3
Homo sapiens	RefSeq	NM_006922.2	ILMN_538	SCN3A	NM_006922.3	NM_006922.3		6328	126362948	NM_006922.3	SCN3A	NP_008853.3	ILMN_1657591	0007560730	S	8417	GAACTGCATGCAGGGAATTGCTATTGCTAAAAAGAATGGTGAGCTACGTC	2	-	165944688-165944737	2q24.3c	Homo sapiens sodium channel, voltage-gated, type III, alpha subunit (SCN3A), transcript variant 1, mRNA.	A sodium channel in a cell membrane whose opening is governed by the membrane potential [goid 1518] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 9589372] [evidence NAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 9589372] [evidence NAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	Nav1.3; KIAA1356; NAC3	NAC3
Homo sapiens	Unigene	Hs.562528	ILMN_115611	HS.562528	Hs.562528		Hs.562528		34530092	AK124327			ILMN_1855346	0002490102	S	1343	CCTGTCAGTCAAGTTCAGAAGGCTTCCTGGGGTAGGTAGAGACGCTCCCT	14	-	76605697-76605746		Homo sapiens cDNA FLJ42336 fis, clone TUTER2001341					
Homo sapiens	RefSeq	NM_023942.1	ILMN_6674	LRRC61	NM_023942.1	NM_023942.1		65999	13027615	NM_023942.1	LRRC61	NP_076431.1	ILMN_1669722	0003830047	S	1147	CTGCAAGGACAGACTGAAGGGCTGTGAGCAGGTGTAAGGGCTCCCACATC	7	+	149665841-149665890	7q36.1c	Homo sapiens leucine rich repeat containing 61 (LRRC61), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HSPC295; FLJ22216; MGC3036; FLJ31392	HSPC295; FLJ22216; MGC3036; FLJ31392
Homo sapiens	RefSeq	XM_931258.1	ILMN_42928	LOC643045	XM_931258.1	XM_931258.1		643045	88942595	XM_931258.1	LOC643045	XP_936351.1	ILMN_1699661	0005390075	S	617	AAGCCCTGGACCCCTGGGGGCTGGGGAGCGGCGCGCTGGGCTCCGCCCCC	1	-	33124517-33124556:33124772-33124781		PREDICTED: Homo sapiens hypothetical protein LOC643045 (LOC643045), mRNA.					
Homo sapiens	RefSeq	NM_000127.2	ILMN_18298	EXT1	NM_000127.2	NM_000127.2		2131	46370065	NM_000127.2	EXT1	NP_000118.2	ILMN_2129927	0004220431	S	2855	CCCTGACCACTTTGCCCAGCGACAGAGCTGCATGAATACGTTTGCCAGCT	8	-	119122889-119122938	8q24.11b	Homo sapiens exostoses (multiple) 1 (EXT1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10878610] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10639137] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9620772] [evidence TAS]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9620772] [evidence TAS]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [pmid 7550340] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [pmid 10639137] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10878610] [evidence TAS]; The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan [goid 15014] [pmid 17761672] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + heparan sulfate = UDP + (N-acetyl-D-glucosaminyl)-heparan sulfate [goid 42328] [pmid 12907669] [evidence NAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12907669] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 12907669] [evidence IPI]; Catalysis of the reaction: beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP-N-acetyl-D-glucosamine = N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-proteoglycan + UDP [goid 50508] [evidence ISS]; Catalysis of the reaction: N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP-alpha-D-glucuronate = beta-D-glucuronosyl-(1,4)-N-acetyl-alpha-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-proteoglycan + UDP [goid 50509] [evidence ISS]	ttv; EXT	ttv; EXT
Homo sapiens	RefSeq	XM_943718.1	ILMN_37316	LOC440905	XM_943718.2	XM_943718.2		440905	113413990	XM_943718.2	LOC440905	XP_948811.1	ILMN_1742607	0005270594	I	755	CCCCCACCTCCGCACACACCCTTTTGCTAGTCTTCTTCCATTTTGCTTAT				2q21.1b	PREDICTED: Homo sapiens hypothetical protein LOC440905, transcript variant 4 (LOC440905), mRNA.					
Homo sapiens	RefSeq	NM_001315.1	ILMN_21850	MAPK14	NM_001315.1	NM_001315.1		1432	4503068	NM_001315.1	MAPK14	NP_001306.1	ILMN_1737627	0005130767	I	1052	CCAGCTTCAGCAGATTATGCGTCTGACAGGAACACCCCCCGCTTATCTCA	6	+	36175950-36175999	6p21.31b	Homo sapiens mitogen-activated protein kinase 14 (MAPK14), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8846784] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9687510] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10912793] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10706854] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 7997261] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10706854] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10838079] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8846784] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9687510] [evidence EXP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 10706854] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9792677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17255097] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16751104] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12761180] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16636664] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 8339] [pmid 7997261] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p38; PRKM15; PRKM14; RK; SAPK2A; CSBP1; CSPB1; p38ALPHA; Mxi2; EXIP; CSBP2	p38; PRKM15; PRKM14; RK; SAPK2A; CSBP1; CSPB1; p38ALPHA; Mxi2; EXIP; CSBP2
Homo sapiens	RefSeq	XM_938575.1	ILMN_172185	LOC286310	XR_017747.1	XR_017747.1		286310	113420960	XR_017747.1	LOC286310		ILMN_1679381	0006370020	S	184	CTGGAAGGGGGCAACCTGGAAGCTAAGGCCACCATGCTGATAAGTGGCCA	9	-	135092039-135092051:135093129-135093165	9q34.2a	PREDICTED: Homo sapiens lipocalin 1-like 1 (LOC286310), misc RNA.					
Homo sapiens	RefSeq	XR_000524.1	ILMN_172185	LOC286310	XR_017747.1	XR_017747.1		286310	113420960	XR_017747.1	LOC286310		ILMN_1751410	0000160347	S	172	ACCCTCACAATCCTGGAAGGGGGCAACCTGGAAGCTAAGGCCACCATGCT	9	-	135092051-135092051:135093129-135093177	9q34.2a	PREDICTED: Homo sapiens lipocalin 1-like 1 (LOC286310), misc RNA.					
Homo sapiens	RefSeq	NM_182925.3	ILMN_5432	FLT4	NM_182925.3	NM_182925.3		2324	107742114	NM_182925.3	FLT4	NP_891555.2	ILMN_2390427	0002690356	A	2826	TGGTGATCGTGGAGTTCTGCAAGTACGGCAACCTCTCCAACTTCCTGCGC	5	-	179978656-179978705	5q35.3f	Homo sapiens fms-related tyrosine kinase 4 (FLT4), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8386825] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11574540] [evidence IGI]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [pmid 11574540] [evidence IGI]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [pmid 9012504] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [pmid 9012504] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16530705] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PCL; FLT41; VEGFR3	PCL; FLT41; VEGFR3
Homo sapiens	RefSeq	NM_198196.1	ILMN_177438	CD96	NM_198196.2	NM_198196.2		10225	93141044	NM_198196.2	CD96	NP_937839.1	ILMN_1711573	0002710754	A	4096	GCCATGTAAGGGAGCCATCTTGGAAGCAGATCCTCCAGCCTCCAGTCAAG	3	+	111370821-111370870	3q13.13d-q13.2a	Homo sapiens CD96 molecule (CD96), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15034010] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1313846] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1313846] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1313846] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 1313846] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp667E2122; MGC22596; TACTILE	DKFZp667E2122; MGC22596; TACTILE
Homo sapiens	RefSeq	NM_002194.2	ILMN_15372	INPP1	NM_002194.2	NM_002194.2		3628	4755138	NM_002194.2	INPP1	NP_002185.1	ILMN_1667239	0006660315	S	1460	GCCTCCTGGTCCAAAACCTGGCACCTGCAGAGACGCATACCTAGAGGAAC	2	+	190944320-190944369	2q32.2b	Homo sapiens inositol polyphosphate-1-phosphatase (INPP1), mRNA.		The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 8390685] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8390685] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: 1D-myo-inositol 1,4-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate [goid 4441] [pmid 8390685] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with lithium ions (Li+) [goid 31403] [evidence IEA]	MGC110984	MGC110984
Homo sapiens	RefSeq	XM_496668.2	ILMN_34829	LOC440992	XM_496668.2	XM_496668.2		440992	88966029	XM_496668.2	LOC440992	XP_496668.1	ILMN_1673296	0000770139	S	235	GATCAGAGGCGCAAAAGCAAAGAATCTCAAAGTGAAAGGAGGAGTTCGAA	3	+	188100797-188100846	3q27.3a	PREDICTED: Homo sapiens similar to 40S ribosomal protein S20 (LOC440992), mRNA.					
Homo sapiens	RefSeq	NM_001037663.1	ILMN_4325	EEF1B2	NM_001037663.1	NM_001037663.1		1933	83376129	NM_001037663.1	EEF1B2	NP_001032752.1	ILMN_2318725	0002650201	A	764	GCTGGAGGAGCAGATCACTGCTTTTGAGGACTATGTGCAGTCCATGGATG	2	+	206735780-206735829	2q33.3b	Homo sapiens eukaryotic translation elongation factor 1 beta 2 (EEF1B2), transcript variant 3, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10368288] [evidence EXP]; A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [pmid 1886777] [evidence NAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 1886777] [evidence NAS]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [pmid 1886777] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]	EEF1B; EF1B; EEF1B1	EEF1B; EF1B; EEF1B1
Homo sapiens	RefSeq	XM_942516.1	ILMN_39916	LOC652831	XM_942516.1	XM_942516.1		652831	89064845	XM_942516.1	LOC652831	XP_947609.1	ILMN_1740910	0007550129	S	43	CGGGTCCCCCGACCTTCACCCCAAGGCTCAATCCTGAACATGGAGGATGA					PREDICTED: Homo sapiens similar to GRB2-related adaptor protein (LOC652831), mRNA.					
Homo sapiens	RefSeq	NM_003970.1	ILMN_9751	MYOM2	NM_003970.1	NM_003970.1		9172	4505314	NM_003970.1	MYOM2	NP_003961.1	ILMN_1716733	0004050717	S	4723	ATTTTCACGGGTGTGGGCACATGGGTGTGGCACCTGGACGTGTGCAGCAT	8	+	2080589-2080638	8p23.3a	Homo sapiens myomesin (M-protein) 2, 165kDa (MYOM2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [evidence IEA]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 7505783] [evidence TAS]	TTNAP	TTNAP
Homo sapiens	RefSeq	XM_001722130.1	ILMN_347422	LOC646753	XM_001722130.1	XM_001722130.1		646753	169183790	XM_001722130.1	LOC646753	XP_001722182.1	ILMN_3290019	0006250292	M	293	CATGAAGCCCGCAAGGACCGAACACCCCCACCCCGATTTAGACCTGCTGG				9p21.1b	PREDICTED: Homo sapiens similar to ribosomal protein S26 (LOC646753), mRNA.					
Homo sapiens	RefSeq	NM_002768.1	ILMN_163441	CHMP1A	NM_002768.2	NM_002768.2		5119	103485495	NM_002768.2	CHMP1A	NP_002759.2	ILMN_1709439	0005900332	S	2186	AACGTCCTTCTGTCCATCGTGGGTAACAGCCTTGGGGAGGGTGCAGAGCT	16	-	89710962-89711011	16q24.3b	Homo sapiens chromatin modifying protein 1A (CHMP1A), transcript variant 2, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 11559747] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11559748] [evidence IDA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [pmid 11559748] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [pmid 11559748] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11559747] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [pmid 11559747] [evidence IDA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 11559748] [evidence IDA]; Any mechanism, at the level of transcription or post-transcription, causing long-term gene inactivation [goid 16458] [pmid 11559747] [evidence IDA]; Any process involving glucose that stops, prevents or reduces the rate of transcription. The presence of glucose in the growth medium inhibits the synthesis of certain enzymes in bacteria growing on the medium. For example, transcription of some catabolic operons is under negative control by specific repressors and glucose is an anti-inducer of xylose utilization and glycerol kinase [goid 45014] [pmid 9837962] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of S phase of mitotic cell cycle activity [goid 45749] [pmid 11559747] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11559747] [evidence IDA]	Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [pmid 8863740] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8863740] [evidence TAS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 17928862] [evidence IPI]	CHMP1A; CHMP1; PCOLN3; KIAA0047; PRSM1	CHMP1A; CHMP1; KIAA0047; PRSM1
Homo sapiens	RefSeq	NM_057735.1	ILMN_27299	CCNE2	NM_057735.1	NM_057735.1		9134	17318562	NM_057735.1	CCNE2	NP_477083.1	ILMN_2412384	0004760154	A	1893	GCTGTGGCTCCTTCCTAACTGGGGCTTTCTTGACATGTAGGTTGCTTGGT	8	-	95962279-95962328	8q22.1c	Homo sapiens cyclin E2 (CCNE2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9840943] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10454565] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7629134] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9840943] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7799941] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11907280] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [pmid 9858585] [evidence TAS]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9840943] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9840943] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]; Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]	CYCE2	CYCE2
Homo sapiens	RefSeq	XM_929960.1	ILMN_44795	LOC653796	XM_929960.1	XM_929960.1		653796	88953973	XM_929960.1	LOC653796	XP_935053.1	ILMN_1749920	0000070274	S	203	AACTCTCCTGACGTCTCCAGAGCCGGTCATTCCACCCAGGGGGACTTCAG	2	+	233633022-233633071	2q37.1d	PREDICTED: Homo sapiens similar to SH2 containing inositol phosphatase isoform b (LOC653796), mRNA.					
Homo sapiens	RefSeq	XM_001716325.1	ILMN_349223	ANKRD18B	XM_001716325.1	XM_001716325.1		441459	169183869	XM_001716325.1	ANKRD18B	XP_001716377.1	ILMN_3192974	0005340202	A	3270	CAAGAACTCCTTGACTGAGCTTTTGCTGCGTTGGGCCCTTGCTCCTATCT				9p13.3d	PREDICTED: Homo sapiens ankyrin repeat domain 18B (ANKRD18B), mRNA.					
Homo sapiens	RefSeq	XR_042428.1	ILMN_336915	LOC728348	XR_042428.1	XR_042428.1		728348	169172341	XR_042428.1	LOC728348		ILMN_3222058	0002360192	A	144	CAGGCCCGACTGCTGCCTCCCAACAACCTCTTTGGACTCAGCGCCTGCCC				7p11.2b	PREDICTED: Homo sapiens misc_RNA (LOC728348), miscRNA.					
Homo sapiens	RefSeq	NM_153035.1	ILMN_17188	C1ORF83	NM_153035.1	NM_153035.1		127428	23308504	NM_153035.1	C1orf83	NP_694580.1	ILMN_1673544	0007510553	S	3739	GCAGACATCCCTCCCAATCTTGCCCACACACTGAGAAGTAACTCGGAGCT	1	+	54337646-54337695	1p32.3b	Homo sapiens chromosome 1 open reading frame 83 (C1orf83), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	FLJ39169; RP4-758J24.3; FLJ32112	FLJ39169; RP4-758J24.3; FLJ32112
Homo sapiens	RefSeq	NM_052890.2	ILMN_27186	PGLYRP2	NM_052890.2	NM_052890.2		114770	21361844	NM_052890.2	PGLYRP2	NP_443122.2	ILMN_1701778	0004230181	S	2504	CCATCTCGGCCTATAGTTGGCTTTGTCCTCACTCTCTCACTTTGGGCCAC	19	-	15440660-15440709	19p13.12a	Homo sapiens peptidoglycan recognition protein 2 (PGLYRP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11461926] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11461926] [evidence NAS]	The posttranslational conversion of C-terminal glycine-extended peptides to C-terminal alpha-amidated peptides. Occurs to over half of all peptide hormones to give bioactive peptides. This is a two step process catalyzed by a peptidyl-glycine alpha-hydroxylating monooxygenase and a peptidyl-alpha-hydroxyglycine alpha-amidating lyase. In some organisms, this process is catalyzed by two separate enzymes, whereas in higher organisms, one polypeptide catalyzes both reactions [goid 1519] [pmid 7663175] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [pmid 11461926] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 11461926] [evidence NAS]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [pmid 11461926] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides [goid 8745] [pmid 7663175] [evidence TAS]; Combining with a peptidoglycan to initiate a change in cell activity [goid 16019] [pmid 11461926] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PGLYRPL; tagL; PGRP-L; tagl-beta; PGRPL; tagL-alpha; HMFT0141; TAGL-like	PGLYRPL; tagL; PGRP-L; tagl-beta; PGRPL; tagL-alpha; HMFT0141; TAGL-like
Homo sapiens	RefSeq	NM_201545.1	ILMN_5560	LGALS8	NM_201545.1	NM_201545.1		3964	42544192	NM_201545.1	LGALS8	NP_963839.1	ILMN_2356654	0006270554	A	2202	GAAAGTGTACGCCAACTAAGGGACCCACAAAGCAGGCAGAGGTAATGCAG	1	+	234779006-234779055	1q43a	Homo sapiens lectin, galactoside-binding, soluble, 8 (LGALS8), transcript variant 4, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8692978] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 8692978] [evidence TAS]	Gal-8; PCTA-1; Po66-CBP; PCTA1	Gal-8; PCTA-1; Po66-CBP; PCTA1
Homo sapiens	RefSeq	NM_201545.1	ILMN_5560	LGALS8	NM_201545.1	NM_201545.1		3964	42544192	NM_201545.1	LGALS8	NP_963839.1	ILMN_2266214	0003420286	I	26	GGAAGATAATCGGAAGAGGTAGAAGACACCGTCCATGACACTTCCTGGGG	1	+	234748352-234748401	1q43a	Homo sapiens lectin, galactoside-binding, soluble, 8 (LGALS8), transcript variant 4, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8692978] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 8692978] [evidence TAS]	Gal-8; PCTA-1; Po66-CBP; PCTA1	Gal-8; PCTA-1; Po66-CBP; PCTA1
Homo sapiens	RefSeq	NM_173552.2	ILMN_16873	C3ORF58	NM_173552.2	NM_173552.2		205428	34222231	NM_173552.2	C3orf58	NP_775823.1	ILMN_1797372	0004060131	S	3654	GCCAGCGGTGATTGCTACTTGAGGTAGTTTTTTACAACTACCATTTCCCC	3	+	145193472-145193521	3q24a	Homo sapiens chromosome 3 open reading frame 58 (C3orf58), mRNA.				MGC33365	MGC33365
Homo sapiens	RefSeq	XM_943839.1	ILMN_34725	LOC649676	XM_943839.1	XM_943839.1		649676	89030584	XM_943839.1	LOC649676	XP_948932.1	ILMN_1726049	0004570097	S	321	AGGTGCTTTCCAAATGCCCACTGCCGCTCTCATCCGTACCAGCGATGATC					PREDICTED: Homo sapiens hypothetical protein LOC649676 (LOC649676), mRNA.					
Homo sapiens	RefSeq	XM_001715058.1	ILMN_335143	LOC100131250	XM_001715058.1	XM_001715058.1		100131250	169208605	XM_001715058.1	LOC100131250	XP_001715110.1	ILMN_3275729	0006250286	M	546	AGCTCCATGACAGTCTCGCCGTAGAAAGAAAAATAAGGCCGGGGAAGACG				15q15.2b	PREDICTED: Homo sapiens hypothetical protein LOC100131250 (LOC100131250), mRNA.					
Homo sapiens	RefSeq	XM_938938.1	ILMN_38993	C9ORF14	XM_938938.1	XM_938938.1		158035	89030260	XM_938938.1	C9orf14	XP_944031.1	ILMN_1654895	0004280521	A	2568	TCCTTGGATCGCCCCGGTGTCAGGTCGCCAAGCTTCATGTTCATGACCAC					PREDICTED: Homo sapiens chromosome 9 open reading frame 14 (C9orf14), mRNA.					
Homo sapiens	RefSeq	XM_001722420.1	ILMN_350268	LOC100131088	XM_001722420.1	XM_001722420.1		100131088	169214155	XM_001722420.1	LOC100131088	XP_001722472.1	ILMN_3293346	0000380730	M	680	GGGTGGAAGAACGAATGGGGAAATCACTGATGCTTTACAAAAAGCGTCAC					PREDICTED: Homo sapiens hypothetical LOC100131088 (LOC100131088), mRNA.					
Homo sapiens	RefSeq	NM_001037633.1	ILMN_10838	SIL1	NM_001037633.1	NM_001037633.1		64374	83641895	NM_001037633.1	SIL1	NP_001032722.1	ILMN_2399392	0003130228	A	1561	CTGTCAACAGCTTGCTGAAGGAGCTGAGATGAGGCCCCACACCAGGACTG	5	-	138378330-138378379	5q31.2d	Homo sapiens SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae) (SIL1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11101517] [evidence NAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 11101517] [evidence NAS]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 11101517] [evidence NAS]	MSS; BAP; ULG5	BAP; ULG5; MSS
Homo sapiens	RefSeq	NM_001037633.1	ILMN_10838	SIL1	NM_001037633.1	NM_001037633.1		64374	83641895	NM_001037633.1	SIL1	NP_001032722.1	ILMN_2290025	0004540594	I	127	ACTGAGGCCAACTGTGAGCCCTGGTGTGTTTCATTGGCAGGAGAAGAGGC	5	-	138560048-138560097	5q31.2d	Homo sapiens SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae) (SIL1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11101517] [evidence NAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 11101517] [evidence NAS]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 11101517] [evidence NAS]	MSS; BAP; ULG5	BAP; ULG5; MSS
Homo sapiens	RefSeq	NM_022464.3	ILMN_10838	SIL1	NM_001037633.1	NM_001037633.1		64374	83641895	NM_001037633.1	SIL1	NP_001032722.1	ILMN_1678729	0006560603	S	1652	GTGGGCTTCTCAGGCAGGAGGACATCTTGGCAGTGCTGGCTTGGCCATTA	5	-	138362612-138362661	5q31.2d	Homo sapiens SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae) (SIL1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11101517] [evidence NAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 11101517] [evidence NAS]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 11101517] [evidence NAS]	MSS; BAP; ULG5	BAP
Homo sapiens	RefSeq	NM_207170.1	ILMN_173786	SYF2	NM_015484.4	NM_015484.4		25949	115387095	NM_015484.4	SYF2	NP_056299.1	ILMN_1660186	0001500647	A	1263	TCATGGCGGCCTGTGACCAAGGTCGGGGAGGAGTGGAGCTATCCTTCCAT	1	-	25549231-25549280	1p36.11c	Homo sapiens SYF2 homolog, RNA splicing factor (S. cerevisiae) (SYF2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11118353] [evidence NAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11118353] [evidence NAS]	P29; CBPIN; DKFZp564O2082; NTC31	P29; CBPIN; NTC31
Homo sapiens	RefSeq	NM_015484.4	ILMN_173786	SYF2	NM_015484.4	NM_015484.4		25949	115387095	NM_015484.4	SYF2	NP_056299.1	ILMN_2287296	0001740110	I	258	GGGAAGCCAAAAAAGCTCGTTTGGAGTGGGAACTAAAGGAAGAGGAAAAG	1	-	25555494-25555543	1p36.11c	Homo sapiens SYF2 homolog, RNA splicing factor (S. cerevisiae) (SYF2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11118353] [evidence NAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11118353] [evidence NAS]	P29; CBPIN; DKFZp564O2082; NTC31	P29; CBPIN; DKFZp564O2082; NTC31
Homo sapiens	RefSeq	NM_015484.4	ILMN_173786	SYF2	NM_015484.4	NM_015484.4		25949	115387095	NM_015484.4	SYF2	NP_056299.1	ILMN_2394498	0004670241	A	429	CAGATTATGCTGCTGCCCAGTTACGCCAGTATCATCGGTTGACCAAGCAG	1	-	25553976-25554023:25554609-25554610	1p36.11c	Homo sapiens SYF2 homolog, RNA splicing factor (S. cerevisiae) (SYF2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11118353] [evidence NAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11118353] [evidence NAS]	P29; CBPIN; DKFZp564O2082; NTC31	P29; CBPIN; DKFZp564O2082; NTC31
Homo sapiens	RefSeq	XR_017059.2	ILMN_177071	LOC646048	XR_017059.2	XR_017059.2		646048	169213576	XR_017059.2	LOC646048		ILMN_3231927	0007610600	I	1037	CTGACAGCCAGGTCATCACCATCAGCAACGAGCGGTCCCCGCTGTCCCAT	19	+	9490611-9490660	19p13.2c	PREDICTED: Homo sapiens similar to cytoskeletal beta actin (LOC646048), mRNA.					
Homo sapiens	RefSeq	XR_017059.2	ILMN_177071	LOC646048	XR_017059.2	XR_017059.2		646048	169213576	XR_017059.2	LOC646048		ILMN_3206558	0001500408	A	477	AAATGCGACCGCTGAGACTGCATCTATCCCGCGAGCACAAAGCCTTGCCC	19	+	9489735-9489784	19p13.2c	PREDICTED: Homo sapiens similar to cytoskeletal beta actin (LOC646048), mRNA.					
Homo sapiens	RefSeq	XR_038735.1	ILMN_337833	LOC100129272	XR_038735.1	XR_038735.1		100129272	169216653	XR_038735.1	LOC100129272		ILMN_3238067	0000270324	S	120	CCGCCGGTGCATGCGGGACCCTTTTTATTGCGTACTGCATCTACTTTGAC	X	+	72359710-72359759	Xq13.2a	PREDICTED: Homo sapiens misc_RNA (LOC100129272), miscRNA.					
Homo sapiens	RefSeq	XR_039263.1	ILMN_347184	LOC100129552	XR_039263.1	XR_039263.1		100129552	169188340	XR_039263.1	LOC100129552		ILMN_3190596	0005700615	A	264	CTCGTGAAGCCCACAAGGACTGAACACCCCCACCTTGATTTAGACCTGCG	10	+	89392606-89392655	10q23.2b	PREDICTED: Homo sapiens misc_RNA (LOC100129552), miscRNA.					
Homo sapiens	RefSeq	NM_014186.1	ILMN_10033	COMMD9	NM_014186.2	NM_014186.2		29099	141802740	NM_014186.2	COMMD9	NP_054905.1	ILMN_1808821	0003610114	S	1013	CCAATCCCAGAACACATGGAGGGAATCGGACAGGTGATGCCAGCAGTTCC				11p13a	Homo sapiens COMM domain containing 9 (COMMD9), mRNA.				FLJ31106; HSPC166	FLJ31106; HSPC166
Homo sapiens	RefSeq	NM_014461.2	ILMN_5455	CNTN6	NM_014461.2	NM_014461.2		27255	28373130	NM_014461.2	CNTN6	NP_055276.1	ILMN_1699317	0004670270	S	3193	ACAGTCAGTGATGGTGGAGATGGAAGCAGCAGTGAGGAAATTAGGATTCC	3	+	1369224-1369270:1371469-1371471	3p26.3c-p26.3b	Homo sapiens contactin 6 (CNTN6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9486763] [evidence TAS]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9486763] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	MGC133256; NB3	MGC133256; NB3
Homo sapiens	RefSeq	NM_033406.2	ILMN_26668	FBXO3	NM_033406.2	NM_033406.2		26273	48928040	NM_033406.2	FBXO3	NP_208385.1	ILMN_1672415	0007100594	I	1396	GGGGGTCATGTGAATTTGTTGAGAGAAATGGACAAGTAAATGAGGCTCCA	11	-	33768497-33768546	11p13c	Homo sapiens F-box protein 3 (FBXO3), transcript variant 2, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]	FBA; FBX3; DKFZp564B092	FBA; FBX3; DKFZp564B092
Homo sapiens	RefSeq	NM_033406.2	ILMN_26668	FBXO3	NM_033406.2	NM_033406.2		26273	48928040	NM_033406.2	FBXO3	NP_208385.1	ILMN_1729175	0005490707	A	1219	CCGATTCCATATGGCATGTCCAACATTCAGGGTGTCTATAGCCCGATTGG	11	-	33768674-33768723	11p13c	Homo sapiens F-box protein 3 (FBXO3), transcript variant 2, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10531035] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence TAS]	FBA; FBX3; DKFZp564B092	FBA; FBX3; DKFZp564B092
Homo sapiens	RefSeq	NM_004162.3	ILMN_27332	RAB5A	NM_004162.3	NM_004162.3		5868	31543538	NM_004162.3	RAB5A	NP_004153.2	ILMN_1805800	0000670367	S	1747	AACCAGGTGTCTGTGATTTCTAATTAATCACCGCTGGCCATTACACAGGT	3	+	20001067-20001116	3p24.3c	Homo sapiens RAB5A, member RAS oncogene family (RAB5A), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 8521472] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 2501306] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15016378] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14613930] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9697774] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	RAB5	RAB5
Homo sapiens	RefSeq	NR_003079.1	ILMN_166180	SNORD111	NR_003079.1	NR_003079.1		692214	96974979	NR_003079.1	SNORD111		ILMN_3237039	0007400332	S	45	TGACATTTTTCTCTGGACACAGTTTTTGCCTTATGAATCTGATCAGGCTG	16	+	69129453-69129502	16q22.1f	Homo sapiens small nucleolar RNA, C/D box 111 (SNORD111), small nucleolar RNA.				HBII-82	HBII-82
Homo sapiens	RefSeq	NM_001032297.1	ILMN_22586	ZNF658B	NM_001032297.1	NM_001032297.1		401509	73808093	NM_001032297.1	ZNF658B	NP_001027468.1	ILMN_1689901	0004780593	S	1606	TTCAGCCCTCAAAATACATCAGAGAATTCACACGGGGGAGAAACCCTATA	9	-	41580552-41580601	9p12a	Homo sapiens zinc finger protein 658B (ZNF658B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_925869.1	ILMN_22586	ZNF658B	NM_001032297.1	NM_001032297.1		401509	73808093	NM_001032297.1	ZNF658B	NP_001027468.1	ILMN_1722985	0000240408	S	2217	GAACTCGCTCAGGGGAGAAGCCCTATGAATGCAGTGAATGTGGGAAAACC	9	-	41579941-41579990	9p12a	Homo sapiens zinc finger protein 658B (ZNF658B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_931945.1	ILMN_39999	LOC643962	XM_931945.1	XM_931945.1		643962	88995884	XM_931945.1	LOC643962	XP_937038.1	ILMN_1768996	0001300414	S	1182	AAAAACCTATCTCAGTATATCAGTATATTATGCATAGTAAGTTGTAAATA	6	-	87598537-87598586	6q15a	PREDICTED: Homo sapiens hypothetical protein LOC643962 (LOC643962), mRNA.					
Homo sapiens	RefSeq	NM_000915.2	ILMN_163750	OXT	NM_000915.2	NM_000915.2		5020	12707574	NM_000915.2	OXT	NP_000906.1	ILMN_1735124	0001850372	S	373	GACCCTGCCTGCGACGCGGAAGCCACCTTCTCCCAGCGCTGAAACTTGAT	20	+	3001023-3001064:3001065-3001072	20p13c	Homo sapiens oxytocin, prepropeptide (OXT), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10218979] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA];  [goid 5185] [evidence IEA]	MGC126890; MGC126892; OT-NPI; OT	MGC126890; MGC126892; OT-NPI; OT
Homo sapiens	RefSeq	XM_926140.1	ILMN_39010	LOC642688	XM_926140.1	XM_926140.1		642688	89059885	XM_926140.1	LOC642688	XP_931233.1	ILMN_1660208	0001660162	S	276	GCTGGGCATGCCCCAGCCCACCTGTGTTATAGCTTGTACTCCTGTTCAGC	X	-	81478948-81478997		PREDICTED: Homo sapiens similar to heat shock protein 90Bf (LOC642688), mRNA.					
Homo sapiens	RefSeq	NM_016562.3	ILMN_3324	TLR7	NM_016562.3	NM_016562.3		51284	67944638	NM_016562.3	TLR7	NP_057646.1	ILMN_1677827	0007200753	S	4797	CAGCGTGCATGTGTTCAAGCCTTAGATTGGCGATGTCGTATTTTCCTCAC	X	+	12818206-12818255	Xp22.2	Homo sapiens toll-like receptor 7 (TLR7), mRNA.	The lipid bilayer surrounding an endosome [goid 10008] [pmid 16024789] [evidence EXP]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 14625308] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [pmid 16286015] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-alpha [goid 45356] [pmid 16286015] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-beta [goid 45359] [pmid 16286015] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-8 [goid 45416] [pmid 16188996] [evidence IMP]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 16188996] [evidence IMP]	Interacting selectively with double-stranded RNA [goid 3725] [pmid 16111635] [evidence IDA]; Interacting selectively with single-stranded RNA [goid 3727] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme [goid 35197] [evidence ISS]		
Homo sapiens	RefSeq	NM_032368.3	ILMN_17648	LZIC	NM_032368.3	NM_032368.3		84328	40255081	NM_032368.3	LZIC	NP_115744.2	ILMN_1661627	0001300136	S	1242	AAAGTCGCATCAGAGAGCTGAGGGTAAGACTCAGGTGTCCTGACTCCCAG	1	-	9989891-9989940	1p36.22d	Homo sapiens leucine zipper and CTNNBIP1 domain containing (LZIC), mRNA.			Interacting selectively with the beta subunit of the catenin complex [goid 8013] [evidence IEA]	MGC15436	MGC15436
Homo sapiens	RefSeq	NM_152693.2	ILMN_4813	CXORF50	NM_152693.2	NM_152693.2		203429	31543182	NM_152693.2	CXorf50	NP_689906.1	ILMN_1709160	0000650661	S	1772	AGCTGTTCTTTGGAGGTTTGAGAGACTTTACCAGTACAACCATTCCCCCC	X	-	72078421-72078470	Xq13.1e	Homo sapiens chromosome X open reading frame 50 (CXorf50), mRNA.				MGC34827	MGC34827
Homo sapiens	RefSeq	NM_138440.1	ILMN_31069	VASN	NM_138440.2	NM_138440.2		114990	88702792	NM_138440.2	VASN	NP_612449.2	ILMN_1667295	0002900274	S	2565	GGTAGGCGGCTGTGTGACTCTAGTCTTGGCCCCAGGAAGCGAAGGAACAA	16	+	4373289-4373338	16p13.3b	Homo sapiens vasorin (VASN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLITL2	VASN
Homo sapiens	RefSeq	NM_004137.2	ILMN_8822	KCNMB1	NM_004137.2	NM_004137.2		3779	25777641	NM_004137.2	KCNMB1	NP_004128.1	ILMN_1652065	0002480544	S	1302	CCTCTGTGCCTGAGTTCTCCCTGTTGTCTCAAAGCGGTACCCATCCTCCC	5	-	169805332-169805381	5q35.1c	Homo sapiens potassium large conductance calcium-activated channel, subfamily M, beta member 1 (KCNMB1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8799178] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8799178] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [pmid 8612769] [evidence TAS];  [goid 15459] [pmid 8612769] [evidence TAS]	K(VCA)beta; SLO-BETA; hslo-beta	K(VCA)beta; SLO-BETA; hslo-beta
Homo sapiens	RefSeq	XM_001719975.1	ILMN_351102	LOC100128597	XM_001719975.1	XM_001719975.1		100128597	169171878	XM_001719975.1	LOC100128597	XP_001720027.1	ILMN_3271625	0005310731	M	367	GTGCTCTCCTGGACGGCCGTGCGGGAAAGAGCAGTGGTGGCCACAAAACA				7q22.3c	PREDICTED: Homo sapiens hypothetical LOC100128597 (LOC100128597), mRNA.					
Homo sapiens	RefSeq	XM_001720728.1	ILMN_347338	LOC729462	XM_001720728.1	XM_001720728.1		729462	169172888	XM_001720728.1	LOC729462	XP_001720780.1	ILMN_3245433	0002640022	S	1074	TTGACCCAACTGGGAGCTCAGAAAACCTGTGTTGTATAAAATCGAGGTTT	8	+	7928725-7928774	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC729462 (LOC729462), mRNA.					
Homo sapiens	RefSeq	NM_133483.1	ILMN_16431	GEFT	NM_133483.2	NM_133483.2		115557	150417976	NM_133483.2	GEFT	NP_597840.1	ILMN_1651536	0000610075	I	591	CTCAAATGAGGATGGCAAGAGAGTGAGCCCTTGGAGAGAGAGGCTGAGCA				12q13.3b	Homo sapiens RhoA/RAC/CDC42 exchange factor (GEFT), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	p63RhoGEF	p63RhoGEF
Homo sapiens	RefSeq	NM_015106.2	ILMN_30244	RAD54L2	NM_015106.2	NM_015106.2		23132	168823442	NM_015106.2	RAD54L2	NP_055921.2	ILMN_3244803	0000620551	S	4616	GGACACTTGGCAGGAGGGAAAAGGAAGAGGACAAAGGAGGGTGGTTGGCC	3	+	51697523-51697572	3p21.2a	Homo sapiens RAD54-like 2 (S. cerevisiae) (RAD54L2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IEA]	FLJ21396; FLJ22400; KIAA0809; HSPC325; SRISNF2L	FLJ22400; KIAA0809; HSPC325; FLJ21396; SRISNF2L
Homo sapiens	RefSeq	XR_000568.1	ILMN_165200	LOC283553	XR_017821.1	XR_017821.1		283553	113424869	XR_017821.1	LOC283553		ILMN_1715209	0003870739	A	374	CGAGATAAAGAATCCAGCCAGGACTGTGAAGCCCCAGGGAATGGCTGCAC				14q22.1c	PREDICTED: Homo sapiens hypothetical LOC283553 (LOC283553), misc RNA.					
Homo sapiens	RefSeq	NM_016262.3	ILMN_7563	TUBE1	NM_016262.3	NM_016262.3		51175	37059741	NM_016262.3	TUBE1	NP_057346.1	ILMN_2134888	0006370674	S	1882	TTTCCGTGTAATAGCCACCAACTTTTCAGGCATAGGTTTTATTACAACTG	6	-	112498823-112498872	6q21i	Homo sapiens tubulin, epsilon 1 (TUBE1), mRNA.	A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [pmid 10620804] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The cell cycle process whereby centrosome duplication and separation takes place. The centrosome cycle can operate with a considerable degree of independence from other processes of the cell cycle [goid 7098] [pmid 10620804] [evidence TAS]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 10620804] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	dJ142L7.2; TUBE; FLJ22589	dJ142L7.2; TUBE; FLJ22589
Homo sapiens	RefSeq	NM_016262.3	ILMN_7563	TUBE1	NM_016262.3	NM_016262.3		51175	37059741	NM_016262.3	TUBE1	NP_057346.1	ILMN_1764398	0006380673	S	1369	CATACAGGAATATGACCAACTGGACGCCACAAAAAACATGCCTGTGCAGG	6	-	112499336-112499385	6q21i	Homo sapiens tubulin, epsilon 1 (TUBE1), mRNA.	A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [pmid 10620804] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The cell cycle process whereby centrosome duplication and separation takes place. The centrosome cycle can operate with a considerable degree of independence from other processes of the cell cycle [goid 7098] [pmid 10620804] [evidence TAS]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 10620804] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	dJ142L7.2; TUBE; FLJ22589	dJ142L7.2; TUBE; FLJ22589
Homo sapiens	RefSeq	XM_933961.1	ILMN_136980	LOC440352	XM_933961.1	XM_933961.1		440352	89040227	XM_933961.1	LOC440352	XP_939054.1	ILMN_1685305	0004900403	S	307	GATCCATCACGTGGGGCAGGATGGTCAGAGCCCGTGTTCTGGTACTACGT	16	+	21270933-21270960:21295470-21295491	16p12.2b-p12.2a	PREDICTED: Homo sapiens similar to BTG3 associated nuclear protein isoform b (LOC440352), mRNA.					
Homo sapiens	RefSeq	NM_032811.1	ILMN_4946	TBRG1	NM_032811.1	NM_032811.1		84897	14249499	NM_032811.1	TBRG1	NP_116200.1	ILMN_1778134	0002710424	S	2489	GGGAGGGACAAAAGGACCCAGAAGTAGAAGAATGGGGATGGAGTGGTGAG	11	+	124008525-124008574	11q24.2a	Homo sapiens transforming growth factor beta regulator 1 (TBRG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17110379] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 17110379] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 17110379] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 17110379] [evidence IMP]; The directed movement of substances from the nucleolus to the nucleoplasm [goid 32066] [pmid 17110379] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 17110379] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17110379] [evidence IPI]	FLJ90113; MGC129890; NIAM; FLJ25020; FLJ14621; TB-5	FLJ90113; MGC129890; NIAM; FLJ25020; FLJ14621; TB-5
Homo sapiens	RefSeq	NM_032811.1	ILMN_4946	TBRG1	NM_032811.1	NM_032811.1		84897	14249499	NM_032811.1	TBRG1	NP_116200.1	ILMN_1670676	0002490008	S	2020	TCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCTGCTGC	11	+	124008056-124008105	11q24.2a	Homo sapiens transforming growth factor beta regulator 1 (TBRG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17110379] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 17110379] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 17110379] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 17110379] [evidence IMP]; The directed movement of substances from the nucleolus to the nucleoplasm [goid 32066] [pmid 17110379] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 17110379] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17110379] [evidence IPI]	FLJ90113; MGC129890; NIAM; FLJ25020; FLJ14621; TB-5	FLJ90113; MGC129890; NIAM; FLJ25020; FLJ14621; TB-5
Homo sapiens	RefSeq	NM_001010942.1	ILMN_27682	RAP1B	NM_015646.4	NM_015646.4		5908	58219793	NM_015646.4	RAP1B	NP_056461.1	ILMN_1701434	0006590703	A	2006	TGGATTGCCATGCAAGGGCTTGCATTATAATTACTTGCCACTTGAATGTG	12	+	67340540-67340589	12q15b	Homo sapiens RAP1B, member of RAS oncogene family (RAP1B), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	DKFZp586H0723; RAL1B; K-REV; DKFZP586H0723	DKFZp586H0723; RAL1B; K-REV
Homo sapiens	Unigene	Hs.48706	ILMN_72850	HS.48706	Hs.48706		Hs.48706		13507349	AF339811			ILMN_1889874	0000240241	S	1188	CATTCCACATCTTAGAACACTTAGACTCCACCACCTACTATGGCAGGCAG	13	+	94411483-94411532		Homo sapiens clone IMAGE:284736, mRNA sequence					
Homo sapiens	RefSeq	NM_183412.2	ILMN_23703	FBXO44	NM_001014765.1	NM_001014765.1		93611	62388867	NM_001014765.1	FBXO44	NP_001014765.1	ILMN_1732182	0001010427	A	2870	CCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGA	1	+	11645521-11645570	1p36.22b	Homo sapiens F-box protein 44 (FBXO44), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fbx44; FBG3; DKFZp781J0852; FBX30; Fbxo6a; MGC14140	Fbx44; FBG3; DKFZp781J0852; FBX30; Fbxo6a; MGC14140
Homo sapiens	RefSeq	NM_001014765.1	ILMN_23703	FBXO44	NM_001014765.1	NM_001014765.1		93611	62388867	NM_001014765.1	FBXO44	NP_001014765.1	ILMN_1651597	0006980440	I	414	ATTAAAGTACCTGATGTGTCCCAAGCTCCTTGGACCGCCCCAGTGACCCC	1	+	11638289-11638338	1p36.22b	Homo sapiens F-box protein 44 (FBXO44), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fbx44; FBG3; DKFZp781J0852; FBX30; Fbxo6a; MGC14140	Fbx44; FBG3; DKFZp781J0852; FBX30; Fbxo6a; MGC14140
Homo sapiens	RefSeq	NM_018051.2	ILMN_1315	WDR60	NM_018051.3	NM_018051.3		55112	142382458	NM_018051.3	WDR60	NP_060521.3	ILMN_1793290	0002600470	S	3566	CAAAACTTCCAGGGGAATGTAGAGCCACGTCCAGGGTGCTCTTTTCTGAG				7q36.3e	Homo sapiens WD repeat domain 60 (WDR60), mRNA.				FLJ23575; FLJ10300	FLJ23575; FLJ10300
Homo sapiens	RefSeq	XM_942115.1	ILMN_30888	FLJ35776	NM_001039796.1	NM_001039796.1		649446	89886270	NM_001039796.1	FLJ35776	NP_001034885.1	ILMN_1685640	0001980372	S	1598	CATCAGCCCACTTGGCCCAGAAAGGATACCAGCTCCTTACTGATGCTCAG	18	+	3587982-3588031	18p11.31e	Homo sapiens hypothetical protein LOC649446 (FLJ35776), mRNA.					
Homo sapiens	RefSeq	NM_001039796.1	ILMN_30888	FLJ35776	NM_001039796.1	NM_001039796.1		649446	89886270	NM_001039796.1	FLJ35776	NP_001034885.1	ILMN_2163187	0002810719	S	1464	GCTGCAGGCCCCCCTGGTCTGTGTAGTTAGGCACTTAATTTTTCATCCTC	18	+	3587848-3587897	18p11.31e	Homo sapiens hypothetical protein LOC649446 (FLJ35776), mRNA.					
Homo sapiens	RefSeq	NR_029631.1	ILMN_388254	MIR218-1	NR_029631.1	NR_029631.1		407000	262206325	NR_029631.1	MIR218-1		ILMN_3308565	0002360093	S	43	GTGGTTGCGAGGTATGAGTAAAACATGGTTCCGTCAAGCACCATGGAACG				4p15.31d	Homo sapiens microRNA 218-1 (MIR218-1), microRNA.					
Homo sapiens	RefSeq	NM_001671.2	ILMN_17580	ASGR1	NM_001671.2	NM_001671.2		432	18426870	NM_001671.2	ASGR1	NP_001662.1	ILMN_1769013	0002370064	S	1165	GGGGAAGGATAGGGTGATGTTCCGAAGGTGAGGAGCTTGAAACCCGTGGC	17	-	7017542-7017591	17p13.1d	Homo sapiens asialoglycoprotein receptor 1 (ASGR1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10734069] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 8439566] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The mediation of the endocytosis of plasma glycoproteins from which the terminal sialic acid residue on their complex carbohydrate moieties has been removed; recognizes the terminal galactose and N-acetylgalactosamine units; the complex of receptor and ligand is internalized and transported to a sorting organelle where disassociation occurs, the receptor being recycled to the cell membrane [goid 4873] [pmid 8439566] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11543633] [evidence IPI]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	ASGPR; Hs.12056; CLEC4H1	ASGPR; Hs.12056; CLEC4H1
Homo sapiens	RefSeq	NM_001005276.1	ILMN_10081	OR2AE1	NM_001005276.1	NM_001005276.1		81392	52627150	NM_001005276.1	OR2AE1	NP_001005276.1	ILMN_1749168	0000050379	S	506	GTGGGCCTCGGAAAGTCTACCACTTCTACTGTGAGTTCCCAGCTGTTGTG	7	-	99474101-99474150	7q22.1b	Homo sapiens olfactory receptor, family 2, subfamily AE, member 1 (OR2AE1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2AE2	OR2AE2
Homo sapiens	RefSeq	XM_937275.1	ILMN_45364	LOC645947	XM_937275.1	XM_937275.1		645947	89041055	XM_937275.1	LOC645947	XP_942368.1	ILMN_1651576	0001240364	S	42	GGAGGACCCCCTGGATCTTAGGCTCAGCCCAGAGGAGCGAATTTGTGTGA				16q23.1d	PREDICTED: Homo sapiens similar to Lsm3 protein (LOC645947), mRNA.					
Homo sapiens	RefSeq	NM_018293.1	ILMN_6649	ZNF654	NM_018293.1	NM_018293.1		55279	8922809	NM_018293.1	ZNF654	NP_060763.1	ILMN_1744471	0004120600	I	1803	CAGTTTGCTATTTCCCTGATGGCCTTAATTTTAGAGTGGTCTTGGATTAC	3	+	88273563-88273612	3p11.2a	Homo sapiens zinc finger protein 654 (ZNF654), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ10997; FLJ21142	FLJ10997; FLJ21142
Homo sapiens	RefSeq	XM_938820.1	ILMN_44037	LOC649747	XM_938820.1	XM_938820.1		649747	89061539	XM_938820.1	LOC649747	XP_943913.1	ILMN_1657827	0003370341	S	394	TCGACAGTGGAGATGGAAGACACCTGCCGCCCAGAAGACCTGCAGAAGCT					PREDICTED: Homo sapiens similar to long interspersed repetitive DNA sequence LINE4 (L1Rn) (LOC649747), mRNA.					
Homo sapiens	RefSeq	NM_005338.4	ILMN_21141	HIP1	NM_005338.4	NM_005338.4		3092	38045918	NM_005338.4	HIP1	NP_005329.3	ILMN_1701403	0000580484	S	6990	TGCAGCCGTCCATAGCAGTACCCCTAAAATCCCACCAGAATACGGGTCCC	7	-	75163769-75163818	7q11.23e	Homo sapiens huntingtin interacting protein 1 (HIP1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9147654] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11604514] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11788820] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 9147654] [evidence TAS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 11604514] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 11577110] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 11788820] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 11788820] [evidence IDA]; The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [pmid 11577110] [evidence IDA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9140394] [evidence TAS]; Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [evidence IEA]; Interacting selectively with a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles [goid 30276] [pmid 11577110] [evidence IDA]	MGC126506; ILWEQ	MGC126506; ILWEQ
Homo sapiens	RefSeq	NM_020863.2	ILMN_2216	ZFAT	NM_020863.2	NM_020863.2		57623	46487910	NM_020863.2	ZFAT	NP_065914.2	ILMN_1679301	0001410026	A	2254	CACCATCACACATCAGCCTGACTCTTGCAAAGCTGCCCCTGAGCACCGGT	8	-	135683209-135683258	8q24.22d	Homo sapiens zinc finger and AT hook domain containing (ZFAT), transcript variant ZFAT-1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZNF406; MGC126815; MGC126817; ZFAT1; ZFAT; AITD3; KIAA1485	ZNF406; MGC126815; MGC126817; ZFAT1; ZFAT; AITD3; KIAA1485
Homo sapiens	RefSeq	XM_928186.1	ILMN_38626	LOC645153	XM_928186.1	XM_928186.1		645153	88983920	XM_928186.1	LOC645153	XP_933279.1	ILMN_1812728	0006980465	S	297	TTGGGCAGTCAAAAGGACCGGATGCCGTGGAGCAGGGGGCGATGCCCGTT	5	+	84161904-84161953		PREDICTED: Homo sapiens similar to T-box 1 isoform C (LOC645153), mRNA.					
Homo sapiens	RefSeq	XM_939110.1	ILMN_34018	LOC391013	XM_372769.4	XM_372769.4		391013	113404801	XM_372769.4	LOC391013	XP_372769.4	ILMN_1656867	0000110541	S	340	GAGTGTGACAAGCAATCCGTGCACTGCTTCAAAGAGAGCCTGCCCACCTA	1	-	20363134-20363183	1p36.12b	PREDICTED: Homo sapiens similar to Group IIC secretory phospholipase A2 precursor (Phosphatidylcholine 2-acylhydrolase GIIC) (GIIC sPLA2) (PLA2-8) (14 kDa phospholipase A2) (LOC391013), mRNA.					
Homo sapiens	RefSeq	NM_080744.1	ILMN_15244	SRCRB4D	NM_080744.1	NM_080744.1		136853	18152778	NM_080744.1	SRCRB4D	NP_542782.1	ILMN_1800002	0006180026	S	2590	ACTAACTCAGATGGTGCTCGGCTGGACAAGGGGACTGGGGGAGGGGCCAA	7	-	76018812-76018861	7q11.23f	Homo sapiens scavenger receptor cysteine rich domain containing, group B (4 domains) (SRCRB4D), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]	SRCRB-S4D; S4D-SRCRB	SRCRB-S4D; S4D-SRCRB
Homo sapiens	RefSeq	XM_933571.1	ILMN_45512	LOC646373	XM_933571.1	XM_933571.1		646373	89044854	XM_933571.1	LOC646373	XP_938664.1	ILMN_1730289	0002470750	S	260	TTCCGCGCGAGCGAGTACCAGAAAGCAGTCGGGCTCTTCCGCTCCATGCT	18	-	14440740-14440789	18p11.21b	PREDICTED: Homo sapiens hypothetical protein LOC646373 (LOC646373), mRNA.					
Homo sapiens	Unigene	Hs.542618	ILMN_106413	HS.542618	Hs.542618		Hs.542618		13747833	BG221812			ILMN_1880075	0003850082	S	88	GGGCCACATCATGCCCAGCTACCAAGGGGAAGAACAGGCTTCATCACAAG	21	-	25060330-25060368:25060370-25060380		RST41629 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_002562.4	ILMN_174696	P2RX7	NM_002562.4	NM_002562.4		5027	34335273	NM_002562.4	P2RX7	NP_002553.2	ILMN_1759326	0003370086	A	2668	CCCCAAGACCTAAGGGTTTTATCTCCTCCCCTTGAATATGGGTGGCTCTG	12	+	120107772-120107821	12q24.31b	Homo sapiens purinergic receptor P2X, ligand-gated ion channel, 7 (P2RX7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17785580] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9038151] [evidence IC ]; A cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32059] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of, within or between cells [goid 2028] [pmid 17785580] [evidence ISS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence ISS]; Any process that increases the rate of the directed movement of calcium ions into the cytosol of a cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 10524] [pmid 9038151] [evidence IDA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence ISS]; The assembly of a bleb, a cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32060] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ATP (adenosine 5'-triphosphate) stimulus [goid 33198] [pmid 9038151] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43409] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cytolysis [goid 45919] [evidence ISS]; The formation of a pore complex, a small opening in a membrane that allows the passage of liquids and/or gases [goid 46931] [pmid 9038151] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [pmid 17036048] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [pmid 18089587] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 51495] [evidence ISS]; Any process that modulates the frequency, rate or extent of the killing by an organism of cells in another organism [goid 51709] [pmid 17785580] [evidence NAS]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [pmid 9038151] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Interacting selectively with lipopolysaccharide [goid 1530] [evidence ISS]; Combining with a purine nucleotide to initiate a change in cell activity [goid 1614] [pmid 9038151] [evidence IPI]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [pmid 9038151] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 17785580] [evidence ISS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 17895406] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 17785580] [evidence ISS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC20089; P2X7	MGC20089; P2X7
Homo sapiens	RefSeq	NM_015224.1	ILMN_25103	C3ORF63	NM_015224.2	NM_015224.2		23272	141802586	NM_015224.2	C3orf63	NP_056039.1	ILMN_1661409	0006370672	S	6404	CCTTCTCCCCCAGTCCACCCCCAAGTGCTCTTAGATACTGAAGGAGTCTC	3	-	56630278-56630327	3p14.3b	Homo sapiens chromosome 3 open reading frame 63 (C3orf63), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]			KIAA1105; RAP140; DKFZp686C2456; se89-1	KIAA1105; RAP140; DKFZp686C2456; se89-1
Homo sapiens	RefSeq	NM_021968.3	ILMN_29916	HIST1H4J	NM_021968.3	NM_021968.3		8363	16306592	NM_021968.3	HIST1H4J	NP_068803.1	ILMN_2224990	0005260397	S	32	TTGGCAAAGGCGGCGCTAAGCGCCACCGTAAAGTACTGCGCGACAATATC	6	+	27791934-27791983	6p22.1c	Homo sapiens histone cluster 1, H4j (HIST1H4J), mRNA.				H4/e; MGC29783; H4F2iv; dJ160A22.2; H4FE	H4/e; MGC29783; H4F2iv; dJ160A22.2; H4FE
Homo sapiens	RefSeq	NM_005952.2	ILMN_16629	MT1X	NM_005952.2	NM_005952.2		4501	31543213	NM_005952.2	MT1X	NP_005943.1	ILMN_1775170	0006620528	S	2	CTGTCCCGCTGCGTGTTTTCCTCTTGATCGGGAACTCCTGCTTCTCCTTG	16	+	55273897-55273946	16q13b	Homo sapiens metallothionein 1X (MT1X), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus [goid 10038] [pmid 9074634] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with cadmium (Cd) ions [goid 46870] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [pmid 9074634] [evidence TAS]	MT1; MT-1l	MT1; MT-1l
Homo sapiens	RefSeq	XM_001719777.1	ILMN_352691	LOC100134138	XM_001719777.1	XM_001719777.1		100134138	169217672	XM_001719777.1	LOC100134138	XP_001719829.1	ILMN_3249276	0001410112	S	1472	ACTACAACCGGGACCACCTCACACATCCTCCCAGATTCACCTTTGCGATC					PREDICTED: Homo sapiens similar to mucin (LOC100134138), partial mRNA.					
Homo sapiens	RefSeq	NM_052938.3	ILMN_8487	FCRL1	NM_052938.3	NM_052938.3		115350	31542630	NM_052938.3	FCRL1	NP_443170.1	ILMN_2226183	0006380301	S	2149	TGCCTCACTGCAACGCCTGCCTCTCAGGCTCAAGCAAACCTCTCACCTCA	1	-	156031668-156031717	1q23.1d	Homo sapiens Fc receptor-like 1 (FCRL1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	IRTA5; RP11-367J7.7; DKFZp667O1421; IFGP1; FCRH1	IRTA5; RP11-367J7.7; DKFZp667O1421; IFGP1; FCRH1
Homo sapiens	RefSeq	XM_925898.1	ILMN_180726	LOC727759	XM_001125931.1	XM_001125931.1		727759	113427824	XM_001125931.1	LOC727759	XP_001125931.1	ILMN_1805187	0002510424	S	1797	AAGCTGCATGTCGGGGGAGCTGGCGGTGTGCAGAGTGACTGAAGGTCCAT	18	+	75007536-75007585	18q23d	PREDICTED: Homo sapiens similar to ATPase, Class II, type 9B (LOC727759), mRNA.					
Homo sapiens	RefSeq	NM_000553.4	ILMN_356692	WRN	NM_000553.4	NM_000553.4		7486	182507163	NM_000553.4	WRN	NP_000544.2	ILMN_3251756	0004810017	S	996	AGCATGAGTCTATCAGATGGGGATGTGGTGGGATTTGACATGGAGTGGCC	8	+	30916780-30916781:30921805-30921852	8p12e	Homo sapiens Werner syndrome, RecQ helicase-like (WRN), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12944467] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11420665] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9618508] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 12181313] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 17498979] [evidence IDA]; A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MLH1 and PMS2 [goid 32389] [pmid 17715146] [evidence IDA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [pmid 18212065] [evidence IMP]; Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 17563354] [evidence IDA]; The process associated with progression of the cell from its inception to the end of its lifespan that occurs as the cell continues cycles of growth and division [goid 1302] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 17611195] [evidence IDA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 17611195] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 290 nm [goid 10225] [pmid 17563354] [evidence IDA]; The inherent decline of a multicellular organism over time, from the optimal fertility and viability of early maturity, that may precede death and may be preceded by other indications, such as sterility [goid 10259] [pmid 16673358] [evidence IMP]; The process by which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted [goid 31297] [pmid 12882351] [evidence IMP]; The process by which a DNA replication fork that has stalled (due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes) is repaired and replication is restarted [goid 31297] [pmid 17115688] [evidence IDA]; Any process that modulates the rate of growth of all or part of an organism [goid 40009] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 9681877] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds [goid 51345] [pmid 17611195] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with segment of DNA shaped like a Y. This shape occurs when DNA contains a region of paired double-stranded DNA on one end and a region of unpaired DNA strands on the opposite end [goid 403] [pmid 17715146] [evidence IDA]; Interacting selective with DNA that contains a bubble. A bubble occurs when DNA contains a region of unpaired, single-stranded DNA flanked on both sides by regions of paired, double-stranded DNA [goid 405] [pmid 11433031] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9288107] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [pmid 9288107] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 10783163] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 12181313] [evidence IDA]; Catalysis of the unwinding of the DNA helix of DNA containing four-way junctions, including Holliday junctions [goid 9378] [pmid 11433031] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 10871376] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 10373438] [evidence IDA]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 10783163] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10783163] [evidence IDA]; Catalysis of the unwinding of the DNA helix in the direction 3' to 5' [goid 43138] [pmid 17715146] [evidence IDA]; Interacting selectively with G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures. G-quadruplex DNA can form under physiological conditions from some G-rich sequences, such as those found in telomeres, immunoglobulin switch regions, gene promoters, fragile X repeats, and the dimerization domain in the human immunodeficiency virus (HIV) genome [goid 51880] [pmid 11433031] [evidence IDA]		
Homo sapiens	RefSeq	XM_939807.1	ILMN_40806	LOC391574	XM_939807.1	XM_939807.1		391574	88971025	XM_939807.1	LOC391574	XP_944900.1	ILMN_1654871	0002450309	A	82	TACGCCAGAGGAGGAGAGCTACAGCACCAGATATGCCACCAAGGCCACAT					PREDICTED: Homo sapiens similar to abnormal embryonic PARtitioning of cytoplasm family member (par-1) (LOC391574), mRNA.					
Homo sapiens	RefSeq	NM_016091.2	ILMN_18001	EIF3L	NM_016091.2	NM_016091.2		51386	51093838	NM_016091.2	EIF3L	NP_057175.1	ILMN_3240740	0005310735	S	1839	TTGCTACCGTGAAACCTTTACCTAGATCAGCCATCAGCCTGTCAACTCAG	22	+	36614474-36614523	22q13.1a-q13.1b	Homo sapiens eukaryotic translation initiation factor 3, subunit L (EIF3L), mRNA.				HSPC021; EIF3S6IP; EIF3S11; MSTP005; HSPC025	HSPC021; EIF3S6IP; EIF3S11; MSTP005; HSPC025
Homo sapiens	RefSeq	NM_016091.2	ILMN_18001	EIF3L	NM_016091.2	NM_016091.2		51386	51093838	NM_016091.2	EIF3L	NP_057175.1	ILMN_1762725	0002190221	S	1572	CAAGATGAAGAACCTCGTGTGGACCAGCGGTATCTCAGCCCTGGATGGTG	22	+	36604034-36604083	22q13.1a-q13.1b	Homo sapiens eukaryotic translation initiation factor 3, subunit L (EIF3L), mRNA.				HSPC021; EIF3S6IP; EIF3S11; MSTP005; HSPC025	HSPC021; EIF3S6IP; EIF3S11; MSTP005; HSPC025
Homo sapiens	RefSeq	NM_023917.2	ILMN_18973	TAS2R9	NM_023917.2	NM_023917.2		50835	68160953	NM_023917.2	TAS2R9	NP_076406.1	ILMN_1732309	0002750243	S	713	GACACACCAAGCAGATTCGACTGCATGCTACAGGGTTCAGAGACCCCAGT	12	-	10962005-10962054	12p13.2c	Homo sapiens taste receptor, type 2, member 9 (TAS2R9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 10761934] [evidence TAS]	TRB6; T2R9	TRB6; T2R9
Homo sapiens	RefSeq	NM_152516.2	ILMN_30105	COMMD1	NM_152516.2	NM_152516.2		150684	56786145	NM_152516.2	COMMD1	NP_689729.1	ILMN_1761242	0003360093	S	599	GGAGTTGGAGTTGTTGAAACCAAGGTGTCCATGATCCCTCCCCACTGACC	2	+	62132928-62132977	2p15c	Homo sapiens copper metabolism (Murr1) domain containing 1 (COMMD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15799966] [evidence IPI]	C2orf5; MGC27155; MURR1	C2orf5; MGC27155; MURR1
Homo sapiens	Unigene	Hs.573253	ILMN_125434	HS.573253	Hs.573253		Hs.573253		18986722	BM676826			ILMN_1911964	0000840538	S	359	GGCCACGGGGGCACAAGCAAACGCACTTTCCTCATTTCTTCTGACAAGCG	6	+	44636795-44636844		UI-E-EJ0-ahu-i-18-0-UI.s2 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahu-i-18-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_170726.1	ILMN_10603	ALDH4A1	NM_170726.1	NM_170726.1		8659	25777735	NM_170726.1	ALDH4A1	NP_733844.1	ILMN_2406557	0006220360	A	2036	GCAGGTGGCTGGGTGGGGGCACAGGCTGGAGTATTCTTAGTTCTACTGGT	1	-	19070574-19070623	1p36.13b	Homo sapiens aldehyde dehydrogenase 4 family, member A1 (ALDH4A1), nuclear gene encoding mitochondrial protein, transcript variant P5CDhS, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8621661] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [pmid 8621661] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 1-pyrroline-5-carboxylate + NAD+ + H2O = L-glutamate + NADH + H+ [goid 3842] [pmid 8621661] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [pmid 8621661] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8621661] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	P5CDh; P5CD; ALDH4; P5CDhL; P5CDhS	P5CDh; P5CD; ALDH4; P5CDhL; P5CDhS
Homo sapiens	RefSeq	NM_170726.1	ILMN_10603	ALDH4A1	NM_170726.1	NM_170726.1		8659	25777735	NM_170726.1	ALDH4A1	NP_733844.1	ILMN_1656368	0001470427	A	2075	GTTCTACTGGTTCTACACTGTGAGGTGGCAATGGGATTTGCTCAGATGCC	1	-	19070535-19070584	1p36.13b	Homo sapiens aldehyde dehydrogenase 4 family, member A1 (ALDH4A1), nuclear gene encoding mitochondrial protein, transcript variant P5CDhS, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8621661] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [pmid 8621661] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 1-pyrroline-5-carboxylate + NAD+ + H2O = L-glutamate + NADH + H+ [goid 3842] [pmid 8621661] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [pmid 8621661] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8621661] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	P5CDh; P5CD; ALDH4; P5CDhL; P5CDhS	P5CDh; P5CD; ALDH4; P5CDhL; P5CDhS
Homo sapiens	RefSeq	NM_021975.2	ILMN_10254	RELA	NM_021975.2	NM_021975.2		5970	46430498	NM_021975.2	RELA	NP_068810.2	ILMN_1705266	0005490750	S	1516	ATACCTGTGGCCCCCCACACAACTGAGCCCATGCTGATGGAGTACCCTGA	11	-	65178587-65178636	11q13.1d	Homo sapiens v-rel reticuloendotheliosis viral oncogene homolog A (avian) (RELA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 3140380] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10723127] [evidence EXP]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 12048232] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 3140380] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10723127] [evidence EXP]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10747850] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12924514] [evidence IDA]; A defense response that is mediated by cells [goid 6968] [pmid 8717528] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [pmid 10747850] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 290 to 320 nm [goid 10224] [pmid 15616591] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15876188] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 15790681] [evidence IDA]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 8717528] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 3091258] [evidence IDA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 15465828] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 10521409] [evidence IPI]; Interacting selectively with phosphate [goid 42301] [pmid 10521409] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 9437432] [evidence IDA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 7739562] [evidence IPI]; Interacting selectively with NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters [goid 51059] [pmid 8441377] [evidence IPI]	NFKB3; MGC131774	NFKB3; MGC131774
Homo sapiens	RefSeq	NM_001040002.1	ILMN_172157	MEOX1	NM_001040002.1	NM_001040002.1		4222	91208414	NM_001040002.1	MEOX1	NP_001035091.1	ILMN_2414568	0004920468	A	1833	TTTGAGGACTGATGGCCAAAGAGCATGGGGGACTGAAGCCCTGGCTGCCT	17	-	41718043-41718092	17q21.31b	Homo sapiens mesenchyme homeobox 1 (MEOX1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7987315] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MOX1	MOX1
Homo sapiens	RefSeq	NM_004527.2	ILMN_172157	MEOX1	NM_001040002.1	NM_001040002.1		4222	91208414	NM_001040002.1	MEOX1	NP_001035091.1	ILMN_1747948	0003890332	I	435	AGAGCTGGAGGCAGAGTTTGCCCATCATAACTACCTGACTCGGCTCCGCA	17	-	41720896-41720945	17q21.31b	Homo sapiens mesenchyme homeobox 1 (MEOX1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7987315] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MOX1	MOX1
Homo sapiens	RefSeq	NM_004527.2	ILMN_172157	MEOX1	NM_001040002.1	NM_001040002.1		4222	91208414	NM_001040002.1	MEOX1	NP_001035091.1	ILMN_1657145	0001230594	A	1906	GCTGGTGTTGCAGAGGGAGGTCAACGTGAGTTTGGATCTCTTGTACGCAG	17	-	41717970-41718019	17q21.31b	Homo sapiens mesenchyme homeobox 1 (MEOX1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which individual somites establish identity during embryogenesis [goid 1757] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7987315] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MOX1	MOX1
Homo sapiens	RefSeq	NM_007271.2	ILMN_8385	STK38	NM_007271.2	NM_007271.2		11329	31377778	NM_007271.2	STK38	NP_009202.1	ILMN_2152581	0000830424	S	3108	CTGCAGCTGGGAGCCTGCTTTCTGCCAGTCTTGAGGTTCTGAAGATCAGC	6	-	36570065-36570114	6p21.31a	Homo sapiens serine/threonine kinase 38 (STK38), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12493777] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 7761441] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12493777] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 12493777] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 12493777] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 12493777] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15197186] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12493777] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NDR1; NDR	NDR1; NDR
Homo sapiens	RefSeq	NM_001010914.1	ILMN_162256	LOC400986	XM_001126815.1	XM_001126815.1		400986	113413901	XM_001126815.1	LOC400986	XP_001126815.1	ILMN_1811117	0006130458	A	732	GACAGTGACTTCTGAGAAACCAGCAGGCTTGAAGGCTACAAGTGACGAGG				2q11.2a	PREDICTED: Homo sapiens protein immuno-reactive with anti-PTH polyclonal antibodies (LOC400986), mRNA.					HEM1
Homo sapiens	RefSeq	NM_019558.2	ILMN_30218	HOXD8	NM_019558.2	NM_019558.2		3234	23510373	NM_019558.2	HOXD8	NP_062458.1	ILMN_1714988	0004640224	S	1431	GGAAACGAAAAAGGAAGCCCAAGAGCTGGAGGAAGACAGAGCCGAAGGCC	2	+	176704526-176704575	2q31.1h	Homo sapiens homeobox D8 (HOXD8), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2568311] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [pmid 2568311] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX4; HOX4E; HOX5.4	HOX4; HOX4E; HOX5.4
Homo sapiens	RefSeq	NM_014474.2	ILMN_19616	SMPDL3B	NM_014474.2	NM_014474.2		27293	57242797	NM_014474.2	SMPDL3B	NP_055289.2	ILMN_1678095	0004390221	A	1148	TCCAGCCATCCGGGTGTTCGAATATGACCGAGCCACACTGAGCCTGAAGG	1	+	28155132-28155180:28157574-28157574	1p35.3b	Homo sapiens sphingomyelin phosphodiesterase, acid-like 3B (SMPDL3B), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ASML3B	ASML3B
Homo sapiens	RefSeq	NM_014474.2	ILMN_19616	SMPDL3B	NM_014474.2	NM_014474.2		27293	57242797	NM_014474.2	SMPDL3B	NP_055289.2	ILMN_1789913	0006040348	I	1199	CATGGTGACCTACTTCATGAACCTGAGCCAGGCGAATGCTCAGGGGACGC	1	+	28157576-28157625	1p35.3b	Homo sapiens sphingomyelin phosphodiesterase, acid-like 3B (SMPDL3B), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine [goid 6685] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: sphingomyelin + H2O = N-acylsphingosine + choline phosphate [goid 4767] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ASML3B	ASML3B
Homo sapiens	RefSeq	NM_145028.3	ILMN_22374	C6ORF81	NM_145028.3	NM_145028.3		221481	37059793	NM_145028.3	C6orf81	NP_659465.2	ILMN_1712616	0004220474	S	973	CGACTGGCAGACCGACTACTTGCCCTGGTCATCCACCCTGAGGAAGATGT	6	+	35716489-35716538	6p21.31b	Homo sapiens chromosome 6 open reading frame 81 (C6orf81), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ25390	FLJ25390
Homo sapiens	Unigene	Hs.161803	ILMN_79789	HS.161803	Hs.161803		Hs.161803		11594637	BF511339			ILMN_1839531	0003190332	S	142	AGAGATGGAGGCCCAGGAAGTAATCTGCCAACAGCCCTACCAAGCCCAGG	16	-	84909061-84909110		UI-H-BI4-aog-b-04-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3084630 3, mRNA sequence					
Homo sapiens	RefSeq	NM_198469.1	ILMN_19839	MORN5	NM_198469.1	NM_198469.1		254956	38348257	NM_198469.1	MORN5	NP_940871.1	ILMN_1748642	0004390040	S	313	GCGACGGCTATGATCGGAGGTTTTACACAGAGATCCTCAATGGCTTGAAG	9	+	123971800-123971849	9q33.2b	Homo sapiens MORN repeat containing 5 (MORN5), mRNA.				RP11-498E2.5; FLJ46909; C9orf113	RP11-498E2.5; FLJ46909; C9orf113
Homo sapiens	RefSeq	NM_000187.1	ILMN_7177	HGD	NM_000187.1	NM_000187.1		3081	4504380	NM_000187.1	HGD	NP_000178.1	ILMN_1737541	0000730672	S	1549	TTCTTCTTCAGAATCTCATGCTTTCTGGTAGTATTGGAGGAGGGGGTTGG	3	-	121830020-121830066:121834684-121834686	3q13.33b	Homo sapiens homogentisate 1,2-dioxygenase (homogentisate oxidase) (HGD), mRNA.		The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [pmid 8782815] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6572] [pmid 8782815] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways involving tyrosine, an aromatic amino acid, 2-amino-3-(4-hydroxyphenyl)propanoic acid [goid 6570] [evidence IEA]	Catalysis of the reaction: homogentisate + O2 = 4-maleylacetoacetate [goid 4411] [pmid 8782815] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: homogentisate + O2 = 4-maleylacetoacetate [goid 4411] [evidence IEA]	AKU; HGO	AKU; HGO
Homo sapiens	RefSeq	NM_006745.3	ILMN_2901	SC4MOL	NM_001017369.1	NM_001017369.1		6307	62865627	NM_001017369.1	SC4MOL	NP_001017369.1	ILMN_1720889	0005860348	A	1548	GCACCAAGAACTTCCATTCTAATCTAGAGCTGACCAGTTTGAGCTGATTC	4	+	166263920-166263969	4q32.3b	Homo sapiens sterol-C4-methyl oxidase-like (SC4MOL), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8663358] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 8663358] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8663358] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8663358] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 8663358] [evidence TAS]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 4,4-dimethyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)H + H+ + O2 = 4-beta-hydroxymethyl-4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)+ + H2O [goid 254] [pmid 8663358] [evidence EXP]; Catalysis of the reaction: 4,4-dimethyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)H + H+ + O2 = 4-beta-hydroxymethyl-4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)+ + H2O [goid 254] [pmid 8663358] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC104344; ERG25; DESP4	MGC104344; ERG25; DESP4
Homo sapiens	RefSeq	NM_001017369.1	ILMN_2901	SC4MOL	NM_001017369.1	NM_001017369.1		6307	62865627	NM_001017369.1	SC4MOL	NP_001017369.1	ILMN_2402499	0001660719	A	1280	GGCACCCGCCACCACGCCCAGCTAATTTTTGTATTTTTGTAGAGATGGGG	4	+	166263652-166263701	4q32.3b	Homo sapiens sterol-C4-methyl oxidase-like (SC4MOL), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8663358] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 8663358] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8663358] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8663358] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 8663358] [evidence TAS]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: 4,4-dimethyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)H + H+ + O2 = 4-beta-hydroxymethyl-4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)+ + H2O [goid 254] [pmid 8663358] [evidence EXP]; Catalysis of the reaction: 4,4-dimethyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)H + H+ + O2 = 4-beta-hydroxymethyl-4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-beta-ol + NAD(P)+ + H2O [goid 254] [pmid 8663358] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC104344; ERG25; DESP4	MGC104344; ERG25; DESP4
Homo sapiens	RefSeq	XM_001721411.1	ILMN_350184	LOC100132894	XM_001721411.1	XM_001721411.1		100132894	169213037	XM_001721411.1	LOC100132894	XP_001721463.1	ILMN_3216744	0003060348	A	271	GGGGATTGGAGAGGGAAGTGCGTCTGGATGACTACTAAGATGAGGAGGCT				18q23a	PREDICTED: Homo sapiens hypothetical protein LOC100132894, transcript variant 1 (LOC100132894), mRNA.					
Homo sapiens	RefSeq	NM_001041.1	ILMN_27150	SI	NM_001041.1	NM_001041.1		6476	4506944	NM_001041.1	SI	NP_001032.1	ILMN_1739144	0003120382	S	5366	GCTTGGATCCCTTCATGTATGGGGGAAAGGAACTACTCCTGTCAATGCAG	3	-	166182786-166182835	3q26.1d	Homo sapiens sucrase-isomaltase (alpha-glucosidase) (SI), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 1717481] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [pmid 1717481] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the hydrolysis of 1,6-alpha-D-glucosidic linkages in some oligosaccharides produced from starch and glycogen by alpha-amylase, and in isomaltose [goid 4574] [evidence IEA]; Catalysis of the hydrolysis of sucrose and maltose by an alpha-D-glucosidase-type action [goid 4575] [evidence IEA]	MGC131621; MGC131622	MGC131621; MGC131622
Homo sapiens	RefSeq	NM_001054.2	ILMN_1381	SULT1A2	NM_001054.2	NM_001054.2		6799	29550878	NM_001054.2	SULT1A2	NP_001045.1	ILMN_2400372	0006400326	A	582	CTATGGGTCCTGGTACCAGCACGTGCAAGAGTGGTGGGAGCTGAGCCGCA	16	-	28604613-28604662	16p11.2e	Homo sapiens sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2 (SULT1A2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving any of a group of physiologically important biogenic amines that possess a catechol (3,4-dihydroxyphenyl) nucleus and are derivatives of 3,4-dihydroxyphenylethylamine [goid 6584] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom [goid 9309] [pmid 9119390] [evidence TAS]	Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenol = adenosine 3',5'-bisphosphate + an aryl sulfate [goid 4062] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC142287; MGC142289; ST1A2; TSPST2; P-PST; STP2; HAST4	MGC142287; MGC142289; ST1A2; TSPST2; P-PST; STP2; HAST4
Homo sapiens	RefSeq	NM_005782.2	ILMN_15597	THOC4	NM_005782.2	NM_005782.2		10189	55770863	NM_005782.2	THOC4	NP_005773.2	ILMN_2364062	0001660309	A	41	TGGACATGTCTCTGGACGACATCATTAAACTGAACCGGAGCCAGCGAGGC	17	-	77442668-77442717	17q25.3g	Homo sapiens THO complex 4 (THOC4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15047853] [evidence IPI]	ALY; BEF	ALY; BEF
Homo sapiens	RefSeq	XR_041283.1	ILMN_353076	LOC729770	XR_041283.1	XR_041283.1		729770	169164506	XR_041283.1	LOC729770		ILMN_3306854	0000240010	M	1597	CGTGTTTTCTCCCGTGGCTCGAGAGCTGCGCTGGTTTCTCATGCAAACTC				2q36.1a	PREDICTED: Homo sapiens misc_RNA (LOC729770), miscRNA.					
Homo sapiens	RefSeq	NM_001007471.1	ILMN_18296	TRPM3	NM_001007471.2	NM_001007471.2		80036	154091313	NM_001007471.2	TRPM3	NP_001007472.2	ILMN_1740622	0004010402	I	57	CTCCCCGAAGCAGCAGGCAGTGTGCCTCCATTCAGCCACATTTGGTATGC	9	-	73736408-73736457	9q21.11c-q21.12a	Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 9, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [pmid 15824111] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MLSN2; LTRPC3; GON-2	MLSN2; LTRPC3; GON-2
Homo sapiens	Unigene	Hs.542001	ILMN_106053	HS.542001	Hs.542001		Hs.542001		1210041	N62212			ILMN_1877250	0004010538	S	218	GGTCTCACCCCGCACCCAGCCTAAAAGGAGAAGAAAGTGCTGAGGCCAAG	2	-	62534044-62534093		yz88g11.s1 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone IMAGE:290180 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003061.1	ILMN_17043	SLIT1	NM_003061.1	NM_003061.1		6585	4507060	NM_003061.1	SLIT1	NP_003052.1	ILMN_1756959	0000150538	S	4744	GCGGAGGAAGTTCACCTTTGAGTGCAGCGATGGGACCTCTTTTGCCGAGG	10	-	98750902-98750951	10q24.1b	Homo sapiens slit homolog 1 (Drosophila) (SLIT1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9813312] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9813312] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10432110] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IEA]; The directed movement of the nucleus to a specific location within a cell [goid 40023] [evidence IEA]; The process by which the migration of an axon growth cone of a retinal ganglion cell (RGC) is directed to its target in the brain in response to a combination of attractive and repulsive cues [goid 31290] [evidence IEA]; The directed movement of the nucleus to a specific location within a cell [goid 40023] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9813312] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with follicle-stimulating hormone to initiate a change in cell activity [goid 4963] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLIL1; MEGF4; Slit-1; SLIT3	SLIL1; MEGF4; Slit-1; SLIT3
Homo sapiens	RefSeq	XM_498888.2	ILMN_44253	LOC440848	XM_498888.2	XM_498888.2		440848	88952997	XM_498888.2	LOC440848	XP_498888.1	ILMN_1683417	0007550398	S	236	GAGACCTGCATTTTAAGCCCAGCTCTGTCTGCACTTGCTGTGTATTGGAC	2	+	15758910-15758950:15801064-15801072		PREDICTED: Homo sapiens hypothetical LOC440848 (LOC440848), mRNA.					
Homo sapiens	RefSeq	XM_001719481.1	ILMN_345862	LOC100129852	XM_001719481.1	XM_001719481.1		100129852	169168867	XM_001719481.1	LOC100129852	XP_001719533.1	ILMN_3189005	0001050673	A	1612	CTGTGCCAAGCCTCTCTCCTGGCTTCTGGTAGACTCGGGCATTCCTTAGC				6q21a	PREDICTED: Homo sapiens hypothetical protein LOC100129852 (LOC100129852), mRNA.					
Homo sapiens	RefSeq	NM_199340.2	ILMN_17947	LRRC37A3	NM_199340.2	NM_199340.2		374819	75677611	NM_199340.2	LRRC37A3	NP_955372.2	ILMN_1784578	0001980438	I	5363	TACAAGAAGATGAAGAAGGATTCTCAAGGGACAGCGAAGCCCCAACGGAG	17	-	62850740-62850762:62851958-62851984	17q24.1a	Homo sapiens leucine rich repeat containing 37, member A3 (LRRC37A3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ34306; KIAA0563; MGC57168; MGC41826	FLJ34306; KIAA0563; MGC57168; MGC41826
Homo sapiens	RefSeq	XM_942374.1	ILMN_45757	LOC650140	XM_942374.1	XM_942374.1		650140	88952562	XM_942374.1	LOC650140	XP_947467.1	ILMN_1810066	0006280397	I	22	CCTTGTAGCAGGTCCCCTGTCTTGTGTGCTGTGTCCCCCCGAGGTATGCT					PREDICTED: Homo sapiens hypothetical protein LOC650139, transcript variant 1 (LOC650140), mRNA.					
Homo sapiens	Unigene	Hs.543795	ILMN_107317	HS.543795	Hs.543795		Hs.543795		11594870	BF511572			ILMN_1886900	0000110300	S	24	GTCAATTGTATGTTATATGTATTTTACCACAACCAAAAAATGTAACTTTA					UI-H-BI4-apq-h-10-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3088386 3, mRNA sequence					
Homo sapiens	RefSeq	XM_938741.1	ILMN_37326	LOC116412	XM_938741.1	XM_938741.1		116412	89057673	XM_938741.1	LOC116412	XP_943834.1	ILMN_1807440	0000630482	I	263	TTCTCCGCAGCGTCAAAGCGGGACATGACGGGACTACGTTTCCCAGCAGT				19q13.43c	PREDICTED: Homo sapiens hypothetical protein BC012365 (LOC116412), mRNA.					
Homo sapiens	RefSeq	XR_015953.2	ILMN_168936	LOC727833	XR_015953.2	XR_015953.2		727833	169210628	XR_015953.2	LOC727833		ILMN_3205837	0003460494	A	1319	AAAAGGTGAATATTGTGCAGGGTGTCTCGGCCTCCATCCAGGACAAAGGG				16p13.2a	PREDICTED: Homo sapiens misc_RNA (LOC727833), miscRNA.					
Homo sapiens	RefSeq	XM_932725.1	ILMN_34181	LOC643224	XM_932725.1	XM_932725.1		643224	89030117	XM_932725.1	LOC643224	XP_937818.1	ILMN_1654317	0002630154	I	1031	CGGCTCCTTAGCCAGGGCAGCTCAAAATCCAGGAACGCTCCAAGGTCATC	9	+	140190011-140190060	9q34.3g	PREDICTED: Homo sapiens similar to tubulin, beta 8, transcript variant 3 (LOC643224), mRNA.					
Homo sapiens	Unigene	Hs.188979	ILMN_80992	HS.188979	Hs.188979		Hs.188979		10302685	AV700714			ILMN_1833478	0000110523	S	427	ACCTGCCTAGAGCTCCAAAATAGACTCTGATCTCAGCAGCAGTGGGGTGG	3	+	157961697-157961746		AV700714 GKC Homo sapiens cDNA clone GKCAEH11 3, mRNA sequence					
Homo sapiens	RefSeq	XR_039226.1	ILMN_349955	LOC728831	XR_039226.1	XR_039226.1		728831	169214151	XR_039226.1	LOC728831		ILMN_3305261	0007550259	M	220	GGCCACTCTGCAATCATCACGTTGCCGCTGACCACTGAGTCCACCATCAA				19p13.2d	PREDICTED: Homo sapiens misc_RNA (LOC728831), miscRNA.					
Homo sapiens	RefSeq	XM_930501.1	ILMN_176215	LOC732058	XM_001133804.1	XM_001133804.1		732058	113418275	XM_001133804.1	LOC732058	XP_001133804.1	ILMN_1662942	0003400152	A	361	AGGAAGAACCTGCCAAGCTTGGTCATCTATGACGCCACATCAGCACAGTA					PREDICTED: Homo sapiens similar to Apolipoprotein(a) precursor (Apo(a)) (Lp(a)) (LOC732058), mRNA.					
Homo sapiens	RefSeq	NM_144998.2	ILMN_3019	STRA13	NM_144998.2	NM_144998.2		201254	71559138	NM_144998.2	STRA13	NP_659435.2	ILMN_1769634	0000270605	S	608	ACCCGACATCAAAGCTGGCGTGTGACCTTTCCAGCCATGCGATATTCCCC	17	-	79976651-79976700	17q25.3g	Homo sapiens stimulated by retinoic acid 13 homolog (mouse) (STRA13), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	E3; MGC14480	E3; MGC14480
Homo sapiens	RefSeq	NR_030200.1	ILMN_387863	MIR524	NR_030200.1	NR_030200.1		574478	262205340	NR_030200.1	MIR524		ILMN_3308245	0002750669	S	9	GTGACCCTACAAAGGGAAGCACTTTCTCTTGTCCAAAGGAAAAGAAGGCG				19q13.41b	Homo sapiens microRNA 524 (MIR524), microRNA.					
Homo sapiens	Unigene	Hs.542265	ILMN_106200	HS.542265	Hs.542265		Hs.542265		5527321	AI863214			ILMN_1895039	0005700326	S	177	AACCTCAGGGGGCTAACCAGGGGGACTGTAGCTGCCCTGTAAAGAACAGG	20	-	58513150-58513199		tz44g11.x1 NCI_CGAP_Brn52 Homo sapiens cDNA clone IMAGE:2291492 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001005909.1	ILMN_12823	IP6K2	NM_001005909.1	NM_001005909.1		51447	55769519	NM_001005909.1	IP6K2	NP_001005909.1	ILMN_3185709	0000460719	A	334	ATGCGTGCTCCGCTTCAATGAGACAACCCTGTGCAAGCCCCTGGTCCCAA	3	-	48732585-48732634	3p21.31e	Homo sapiens inositol hexakisphosphate kinase 2 (IP6K2), transcript variant 2, mRNA.				IP6K2; PiUS	IP6K2; PiUS
Homo sapiens	RefSeq	NR_015357.1	ILMN_352616	LOC791120	NR_015357.1	NR_015357.1		791120	168480140	NR_015357.1	LOC791120		ILMN_3240226	0004920706	S	1135	GCCTCAGTGTCCAGCACTGTGCCCTGCACATGGAAAGCCCCTACGTTTGT				7q36.1b	Homo sapiens hypothetical LOC791120 (LOC791120), non-coding RNA.				MGC149135	MGC149135
Homo sapiens	RefSeq	NR_000012.1	ILMN_4637	SNORA68	NR_000012.1	NR_000012.1		26780	22546025	NR_000012.1	SNORA68		ILMN_3244592	0002260437	S	47	AACAGAGGTGCAAACAGCAAGCGGATCTTGTCGCCTTTGGGGGGCTGTGG	19	+	17834443-17834492	19p13.11d	Homo sapiens small nucleolar RNA, H/ACA box 68 (SNORA68), small nucleolar RNA.				RNU68; U68	RNU68; U68
Homo sapiens	RefSeq	NM_004477.2	ILMN_11683	FRG1	NM_004477.2	NM_004477.2		2483	73695875	NM_004477.2	FRG1	NP_004468.1	ILMN_1734696	0002470519	S	924	CTGGACAGGAGAGCCAAATTGAAAGCCGACAGATACTGCAAGTGACTGGG	4	+	190883080-190883087:190884248-190884284:190884285-190884289	4q35.2d	Homo sapiens FSHD region gene 1 (FRG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FSG1; FRG1A	FSG1; FRG1A
Homo sapiens	RefSeq	NM_024061.3	ILMN_2330	ZNF655	NM_024061.3	NM_024061.3		79027	58331257	NM_024061.3	ZNF655	NP_076966.1	ILMN_2396292	0002070148	A	377	TGTCCTCCAGAGCAGTGATGGAGGAAATACCAGCCCAGGAAGCAGCAGGG	7	+	98996102-98996118:98996119-98996151	7q22.1b	Homo sapiens zinc finger protein 655 (ZNF655), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15558030] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	VIK-1; FLJ23461; MGC5521; VIK; DKFZp686M1631; MGC10859; MGC16203	VIK-1; FLJ23461; MGC5521; VIK; DKFZp686M1631; MGC10859; MGC16203
Homo sapiens	RefSeq	NM_024022.1	ILMN_20598	TMPRSS3	NM_024022.1	NM_024022.1		64699	13173470	NM_024022.1	TMPRSS3	NP_076927.1	ILMN_2358474	0002480095	A	916	TACCACCTGTGCGGGGGCTCTGTCATCACGCCCCTGTGGATCATCACTGC	21	-	42676228-42676277	21q22.3b	Homo sapiens transmembrane protease, serine 3 (TMPRSS3), transcript variant A, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16780588] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 12393794] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11137999] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11068177] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 11068177] [evidence NAS]; The regulation of the levels, transport, and metabolism of sodium ions within a cell or between a cell and its external environment [goid 6883] [pmid 12393794] [evidence IDA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11137999] [evidence NAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11068177] [evidence NAS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA];  [goid 17080] [pmid 12393794] [evidence IDA]	ECHOS1; DFNB10; DFNB8; TADG12	ECHOS1; DFNB10; DFNB8; TADG12
Homo sapiens	RefSeq	NM_001034955.1	ILMN_19549	SORBS1	NM_001034955.1	NM_001034955.1		10580	78000164	NM_001034955.1	SORBS1	NP_001030127.1	ILMN_2258689	0003850093	I	1383	CAGTGGTACAGTCATAGCTCACTGCAGCCTCAAACTCCTAGACTCAAGCA	10	-	97170443-97170492	10q23.33d	Homo sapiens sorbin and SH3 domain containing 1 (SORBS1), transcript variant 4, mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11371513] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells [goid 5915] [pmid 10085297] [evidence TAS]; An adherens junction which connects a cell to the extracellular matrix [goid 5924] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence ISS]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence ISS]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence ISS]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence ISS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 10085297] [evidence TAS]; Interacting selectively with the insulin receptor [goid 5158] [pmid 11374898] [evidence IDA]	SH3P12; DKFZp586P1422; SORB1; R85FL; DKFZp451C066; KIAA1296; FLJ12406; SH3D5; FLAF2; CAP	SH3P12; DKFZp586P1422; SORB1; R85FL; DKFZp451C066; KIAA1296; FLJ12406; SH3D5; FLAF2; CAP
Homo sapiens	RefSeq	NM_001001922.1	ILMN_17544	OR52N5	NM_001001922.1	NM_001001922.1		390075	50054480	NM_001001922.1	OR52N5	NP_001001922.1	ILMN_1794767	0004250603	S	681	CACTTTGATCCTCAAGGCAGCGATCAGCCTCTCTTCATCAGATGCTCGGC	11	-	5799134-5799183	11p15.4c	Homo sapiens olfactory receptor, family 52, subfamily N, member 5 (OR52N5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-62; OR52N5Q	OR11-62; OR52N5Q
Homo sapiens	RefSeq	NM_025215.4	ILMN_6169	PUS1	NM_025215.4	NM_025215.4		80324	70166644	NM_025215.4	PUS1	NP_079491.2	ILMN_1672157	0001090669	I	347	AGGTCAGGGGTCAGAAGGAACAGGGCTGCAGCGTCAGGGTCCGAGAGGTT	12	+	130980088-130980137	12q24.33c	Homo sapiens pseudouridylate synthase 1 (PUS1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The intramolecular conversion of uridine to pseudouridine within an RNA molecule. This posttranscriptional base modification occurs in tRNA, rRNA, and snRNAs [goid 1522] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence NAS]	Catalysis of the reaction: uracil + D-ribose 5-phosphate = pseudouridine 5'-phosphate + H2O [goid 4730] [pmid 10094309] [evidence NAS]; Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MLASA; MGC11268	MLASA; MGC11268
Homo sapiens	RefSeq	NM_003489.2	ILMN_4339	NRIP1	NM_003489.2	NM_003489.2		8204	57232745	NM_003489.2	NRIP1	NP_003480.2	ILMN_1718629	0007510408	S	6771	GTGATTACCTGCTGCATGAAAAGTGCATGGGGGACCCTGTGCATCTGTGC	21	-	15255898-15255947	21q11.2d	Homo sapiens nuclear receptor interacting protein 1 (NRIP1), mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12773562] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11266503] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7641693] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10364267] [evidence IDA]; Disruption of theca cell layer releasing follicular fluid and/or the oocyte [goid 1543] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IEA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; The release of a mature ovum/oocyte from an ovary [goid 30728] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 10364267] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 7641693] [evidence IDA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 7641693] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10364267] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 11518808] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10364267] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with an estrogen receptor [goid 30331] [pmid 7641693] [evidence IPI]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [pmid 11518808] [evidence IPI]; Interacting selectively with a glucocorticoid receptor [goid 35259] [pmid 11266503] [evidence IPI]; Interacting selectively with a glucocorticoid receptor [goid 35259] [pmid 12773562] [evidence IPI]; Interacting selectively with a glucocorticoid receptor [goid 35259] [pmid 10364267] [evidence IPI]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence IEA]; Interacting selectively with a retinoid X receptor [goid 46965] [evidence IEA]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]	RIP140	RIP140
Homo sapiens	RefSeq	NM_001013656.1	ILMN_16888	LOC389936	NM_001013656.1	NM_001013656.1		389936	61966758	NM_001013656.1	LOC389936	NP_001013678.1	ILMN_1760434	0003890612	S	2717	CCATAGCCAGGATTCACGGGTCTAGGAATCAAGGTGCAGAAGGAGAAGTG	10	+	9491934-9491983	10p14c	Homo sapiens similar to proline-rich proteoglycan 2 (LOC389936), mRNA.					
Homo sapiens	RefSeq	XM_001717331.1	ILMN_351968	LOC100128683	XM_001717331.1	XM_001717331.1		100128683	169205547	XM_001717331.1	LOC100128683	XP_001717383.1	ILMN_3272723	0001740095	M	307	CAGGGAAGCCCAGGCGGCTGTCACATTGGATGGAAGAGGAGGCCTTGTAT				12q13.13d	PREDICTED: Homo sapiens hypothetical LOC100128683 (LOC100128683), mRNA.					
Homo sapiens	RefSeq	NM_002172.1	ILMN_28858	IFNA14	NM_002172.1	NM_002172.1		3448	4504590	NM_002172.1	IFNA14	NP_002163.1	ILMN_1742328	0005390446	S	118	CTCTGGGCTGTAATCTGTCTCAAACCCACAGCCTGAATAACAGGAGGACT	9	-	21229823-21229872	9p21.3d	Homo sapiens interferon, alpha 14 (IFNA14), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	 [goid 5126] [pmid 6163083] [evidence TAS]	MGC125757; MGC125756	MGC125757; MGC125756
Homo sapiens	RefSeq	NM_032680.2	ILMN_21787	EFCAB4B	NM_032680.2	NM_032680.2		84766	34147431	NM_032680.2	EFCAB4B	NP_116069.1	ILMN_1796436	0005900280	I	1777	TACACATGCGCCCACATCCAGTTTATTCCTCCTGGTGGGGAGGCTCTGCC	12	-	3627729-3627778	12p13.32b	Homo sapiens EF-hand calcium binding domain 4B (EFCAB4B), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC4266; FLJ33805	MGC4266; FLJ33805
Homo sapiens	RefSeq	NM_014463.1	ILMN_23516	LSM3	NM_014463.1	NM_014463.1		27258	7657314	NM_014463.1	LSM3	NP_055278.1	ILMN_1719032	0004260075	S	66	ACTGTAGAGGAGCCCCTGGATCTTATCAGGCTCAGCCTAGATGAGCGAAT	3	+	14198084-14198133	3p25.1a	Homo sapiens LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) (LSM3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10369684] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 10369684] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	USS2; YLR438C; SMX4	USS2; YLR438C; SMX4
Homo sapiens	RefSeq	NM_014463.1	ILMN_23516	LSM3	NM_014463.1	NM_014463.1		27258	7657314	NM_014463.1	LSM3	NP_055278.1	ILMN_2229242	0007380554	S	262	CGAAACGGAATATTCCAATGCTCTTTGTCCGGGGAGATGGCGTTGTCCTG	3	+	14214549-14214598	3p25.1a	Homo sapiens LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) (LSM3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10369684] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 10369684] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	USS2; YLR438C; SMX4	USS2; YLR438C; SMX4
Homo sapiens	RefSeq	NM_001006665.1	ILMN_21741	RPS6KA1	NM_002953.3	NM_002953.3		6195	56243479	NM_002953.3	RPS6KA1	NP_002944.2	ILMN_1715173	0004730739	A	3077	AGAGTTCACAGGAGGCCAGTGGGCGGGCCATGAGGGACAGGGTCTTTTTT	1	+	26773985-26774034	1p36.11b	Homo sapiens ribosomal protein S6 kinase, 90kDa, polypeptide 1 (RPS6KA1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16626623] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9770464] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8141249] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9770464] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8141249] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16282323] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HU-1; MAPKAPK1A; RSK; S6K-alpha 1; RSK1	HU-1; MAPKAPK1A; RSK; S6K-alpha 1; RSK1
Homo sapiens	RefSeq	NM_002953.3	ILMN_21741	RPS6KA1	NM_002953.3	NM_002953.3		6195	56243479	NM_002953.3	RPS6KA1	NP_002944.2	ILMN_2251452	0002000576	I	204	AGCTAGTGCCTCTGGACCCGGAGAATGGACAGACCTCAGGGGAAGAAGCT	1	+	26729039-26729061:26736003-26736029	1p36.11b	Homo sapiens ribosomal protein S6 kinase, 90kDa, polypeptide 1 (RPS6KA1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16626623] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9770464] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8141249] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9770464] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8141249] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16282323] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HU-1; MAPKAPK1A; RSK; S6K-alpha 1; RSK1	HU-1; MAPKAPK1A; RSK; S6K-alpha 1; RSK1
Homo sapiens	RefSeq	XM_932195.1	ILMN_32608	LOC643009	XM_932195.1	XM_932195.1		643009	89058459	XM_932195.1	LOC643009	XP_937288.1	ILMN_1813658	0000510678	I	101	GCCTGCCCTTGGGTCCTGGGGAGCCACGGAAGGTTGTGGGTGCCAGAGGG	22	-	18747872-18747921		PREDICTED: Homo sapiens similar to gamma-glutamyltransferase 2, transcript variant 2 (LOC643009), mRNA.					
Homo sapiens	RefSeq	NM_138362.1	ILMN_5436	FAM104B	NM_138362.2	NM_138362.2		90736	142370409	NM_138362.2	FAM104B	NP_612371.1	ILMN_1705848	0006380148	S	949	AAAAAATCTAACACTGGCTACCCCGCTCGGGACCCCTTCCACGCTGTGAA	X	-	55186349-55186398	Xp11.21a	Homo sapiens family with sequence similarity 104, member B (FAM104B), mRNA.				CXorf44; FLJ20434	CXorf44; FLJ20434
Homo sapiens	RefSeq	XM_939082.1	ILMN_34123	LOC338805	XM_939082.1	XM_939082.1		338805	89036225	XM_939082.1	LOC338805	XP_944175.1	ILMN_1652786	0003940093	A	150	TGTGGAGGAAGACTTAAAGGCAGATGAACCATCCAGTAAGGAAAGTTATC				12q14.1a	PREDICTED: Homo sapiens similar to heat shock 70kD protein binding protein (LOC338805), mRNA.					
Homo sapiens	RefSeq	XM_942801.1	ILMN_41349	LOC647537	XM_942801.1	XM_942801.1		647537	89065728	XM_942801.1	LOC647537	XP_947894.1	ILMN_1800408	0003310102	I	3	GACACAAGTAACAGGATTGGTTGGGTTTGGTGTAAAGGAGAAGGAAGAGG					PREDICTED: Homo sapiens similar to Pancreatic alpha-amylase precursor (PA) (1,4-alpha-D-glucan glucanohydrolase), transcript variant 2 (LOC647537), mRNA.					
Homo sapiens	RefSeq	NR_002435.1	ILMN_29064	SNORD100	NR_002435.1	NR_002435.1		594838	71480101	NR_002435.1	SNORD100		ILMN_1673181	0005890692	S	18	CTGGCTCCCTCTACTGAACTGCCATGAGGAAACTGCCATGTCACCCTTCT	6	+	133137958-133138007	6q23.2b	Homo sapiens small nucleolar RNA, C/D box 100 (SNORD100), small nucleolar RNA.				HBII-429	HBII-429
Homo sapiens	RefSeq	NM_205545.1	ILMN_5246	LYPD2	NM_205545.1	NM_205545.1		137797	45387924	NM_205545.1	LYPD2	NP_991108.1	ILMN_1724266	0007000408	S	203	CGCCACCTGCACCACCAACGAAACCATGTGCAAGACCACACTCTACTCCC	8	-	143832477-143832526	8q24.3e	Homo sapiens LY6/PLAUR domain containing 2 (LYPD2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			UNQ430; LYPDC2; MGC148106	UNQ430; LYPDC2; MGC148106
Homo sapiens	RefSeq	XR_039633.1	ILMN_345886	LOC100131575	XR_039633.1	XR_039633.1		100131575	169208065	XR_039633.1	LOC100131575		ILMN_3288210	0004180543	M	211	CCAAAGATCCTGTGTCTTCCGTGCAGCTGAAAGCTGCTGAAACACGTCAG	15	+	47236026-47236075	15q21.1d	PREDICTED: Homo sapiens misc_RNA (LOC100131575), miscRNA.					
Homo sapiens	RefSeq	XR_039633.1	ILMN_345886	LOC100131575	XR_039633.1	XR_039633.1		100131575	169208065	XR_039633.1	LOC100131575		ILMN_3211707	0000290092	A	9	TGCGGTGACTCGCGGGATCAGGAATTTCAAGAGAACCGAGCGGAAAGGGA	15	+	47235824-47235873	15q21.1d	PREDICTED: Homo sapiens misc_RNA (LOC100131575), miscRNA.					
Homo sapiens	RefSeq	NM_002343.2	ILMN_20816	LTF	NM_002343.2	NM_002343.2		4057	54607119	NM_002343.2	LTF	NP_002334.2	ILMN_1677920	0005550367	S	632	CAAATGTGCCTTCTCCTCCCAGGAACCGTACTTCAGCTACTCTGGTGCCT	3	-	46496788-46496837	3p21.31i	Homo sapiens lactotransferrin (LTF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [pmid 9770539] [evidence TAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 9770539] [evidence TAS]; Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HLF2; GIG12	GIG12; HLF2
Homo sapiens	RefSeq	NM_005793.3	ILMN_17980	NME6	NM_005793.3	NM_005793.3		10201	38564323	NM_005793.3	NME6	NP_005784.1	ILMN_1768279	0003890240	S	512	TTCAGTGAACAGCGCTGGTATGAGGAGGAAGAGCCCCAGTTGCGCTGTGG	3	-	48336196-48336245	3p21.31f	Homo sapiens non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase) (NME6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence NAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a nucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with triphosphate on its glycose moiety [goid 9142] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [pmid 99381535] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NM23-H6; IPIA-ALPHA	NM23-H6; IPIA-ALPHA
Homo sapiens	RefSeq	NM_005793.3	ILMN_17980	NME6	NM_005793.3	NM_005793.3		10201	38564323	NM_005793.3	NME6	NP_005784.1	ILMN_2229032	0001850446	S	758	GGGCCTAGCTCACCACAGCACATCCTCCAGGATCTAGCCTTCTATCTACC	3	-	48335950-48335999	3p21.31f	Homo sapiens non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase) (NME6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate [goid 6183] [evidence IEA]; The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate [goid 6228] [evidence IEA]; The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate [goid 6241] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence NAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a nucleoside triphosphate, a glycosamine consisting of a base linked to a deoxyribose or ribose sugar esterified with triphosphate on its glycose moiety [goid 9142] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate [goid 4550] [pmid 99381535] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NM23-H6; IPIA-ALPHA	NM23-H6; IPIA-ALPHA
Homo sapiens	RefSeq	XM_928479.1	ILMN_22541	CTAG1A	NM_139250.1	NM_139250.1		246100	21281684	NM_139250.1	CTAG1A	NP_640343.1	ILMN_1652196	0001430215	I	8	TGGGCCCTGACCTTCTCTCTGAGAGCCGGGCAGAGGCTCCGGAGCCATGC	X	+	153466617-153466664:153466665-153466666	Xq28g	Homo sapiens cancer/testis antigen 1A (CTAG1A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17137291] [evidence IPI]	LAGE2A; ESO1	
Homo sapiens	RefSeq	NM_139250.1	ILMN_22541	CTAG1A	NM_139250.1	NM_139250.1		246100	21281684	NM_139250.1	CTAG1A	NP_640343.1	ILMN_2206411	0001070577	S	1	ATCCTCGTGGGCCCTGACCTTCTCTCTGAGAGCCGGGCAGAGGCTCCGGA	X	+	153466610-153466659	Xq28g	Homo sapiens cancer/testis antigen 1A (CTAG1A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17137291] [evidence IPI]	LAGE2A; ESO1	ESO1; LAGE2A
Homo sapiens	RefSeq	NM_139250.1	ILMN_22541	CTAG1A	NM_139250.1	NM_139250.1		246100	21281684	NM_139250.1	CTAG1A	NP_640343.1	ILMN_2206413	0006770332	S	121	TTCCTGATGGCCCAGGGGGCAATGCTGGCGGCCCAGGAGAGGCGGGTGCC	X	+	153466730-153466779	Xq28g	Homo sapiens cancer/testis antigen 1A (CTAG1A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17137291] [evidence IPI]	LAGE2A; ESO1	ESO1; LAGE2A
Homo sapiens	RefSeq	NM_006279.2	ILMN_5912	ST3GAL3	NM_174967.1	NM_174967.1		6487	28373075	NM_174967.1	ST3GAL3	NP_777627.1	ILMN_1699472	0007040195	A	1506	TAGCCTGGACCAAAGGGAAGTGAGGCCCAAGGAGCTTACCCAAGCTGTGG	1	+	44169322-44169371	1p34.1f	Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (ST3GAL3), transcript variant 5, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the reaction: CMP-N-acetylneuraminate + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein = CMP + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-glycoprotein [goid 8118] [pmid 8333853] [evidence TAS]	ST3Gal III; ST3N; ST3GalIII; ST3GALII; SIAT6	ST3Gal III; ST3N; ST3GalIII; ST3GALII; SIAT6
Homo sapiens	RefSeq	XR_019205.2	ILMN_182414	LOC400446	XR_019205.2	XR_019205.2		400446	169209311	XR_019205.2	LOC400446		ILMN_3287996	0000580553	M	3034	CTTCAGTGAGCCGAGGCCACACCACTGCACTCCGGCCTTGGTGACAGAGA				15q26.1b	PREDICTED: Homo sapiens misc_RNA (LOC400446), miscRNA.					
Homo sapiens	RefSeq	XM_936052.1	ILMN_137164	LOC153561	XM_936052.1	XM_936052.1		153561	88986882	XM_936052.1	LOC153561	XP_941145.1	ILMN_1666746	0004640286	I	2077	TTCTACCACCCCCTAACTAAGCCTTTAGGTCAGACCGCAACCCCAGCCAA				5q13.2a	PREDICTED: Homo sapiens hypothetical protein LOC153561 (LOC153561), mRNA.					
Homo sapiens	RefSeq	NM_152282.2	ILMN_138667	ACPL2	NM_152282.2	NM_152282.2		92370	42476016	NM_152282.2	ACPL2	NP_689495.1	ILMN_1706598	0003800538	S	2337	GACTTGGCCCCTGGGCTGTAGTTTGCTGACCCCTCATCTAAAAAATAGGC	3	+	142495353-142495402	3q23c	Homo sapiens acid phosphatase-like 2 (ACPL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ23751	FLJ23751
Homo sapiens	RefSeq	XM_926656.1	ILMN_40029	LOC643310	XM_926656.1	XM_926656.1		643310	89059919	XM_926656.1	LOC643310	XP_931749.1	ILMN_1756139	0000510209	S	132	GGTGGCCTTCCAGGATGTGGCTCAGAACCCAGCAAATATGTCAAAATACC	X	-	92429452-92429501	Xq21.32a	PREDICTED: Homo sapiens similar to heat shock 70kD protein binding protein (LOC643310), mRNA.					
Homo sapiens	RefSeq	XM_932349.1	ILMN_34046	LOC643558	XM_932349.1	XM_932349.1		643558	89025014	XM_932349.1	LOC643558	XP_937442.1	ILMN_1741977	0007560634	I	226	TTCTTTTCAAAACCAGCCTTACTGACTAAATGTTAAATATGTACTAGTCG	7	+	72232408-72232457		PREDICTED: Homo sapiens similar to General transcription factor II-I (GTFII-I) (TFII-I) (Bruton tyrosine kinase-associated protein 135) (BTK-associated protein 135) (BAP-135), transcript variant 13 (LOC643558), mRNA.					
Homo sapiens	RefSeq	NM_018076.2	ILMN_1440	ARMC4	NM_018076.2	NM_018076.2		55130	31657113	NM_018076.2	ARMC4	NP_060546.2	ILMN_1776395	0004200274	S	3117	TCTACTGGATATGGTTGGGTCCCCTGACCAGGATCTCCAGGAAGCTGCAG	10	-	28268884-28268933	10p12.1a-p11.23c	Homo sapiens armadillo repeat containing 4 (ARMC4), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ10376; FLJ32798; FLJ10817; RP11-691I13.1; DKFZP434P1735	FLJ10376; FLJ32798; FLJ10817; RP11-691I13.1; DKFZP434P1735
Homo sapiens	RefSeq	NM_012125.2	ILMN_21629	CHRM5	NM_012125.2	NM_012125.2		1133	38176159	NM_012125.2	CHRM5	NP_036257.1	ILMN_1746646	0002030673	S	2543	TCCTTGTACTCACTGAACCCATGCTGATCTCCAGGGAACCATCCTTCCTC	15	+	32144439-32144488	15q14a	Homo sapiens cholinergic receptor, muscarinic 5 (CHRM5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 3272174] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 3272174] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7197] [pmid 8663391] [evidence TAS]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [pmid 3272174] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8063729] [evidence TAS]; The directed movement of dopamine into, out of, within or between cells. Dopamine is a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 15872] [evidence IEA]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IEA]	Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = D-myo-inositol 1,4,5-trisphosphate + diacylglycerol [goid 4435] [pmid 1905013] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4981] [pmid 3272174] [evidence TAS]	MGC41838; HM5	MGC41838; HM5
Homo sapiens	RefSeq	NM_004751.1	ILMN_11495	GCNT3	NM_004751.1	NM_004751.1		9245	4758421	NM_004751.1	GCNT3	NP_004742.1	ILMN_1712082	0004610520	S	1975	TCAGTTGAATGCCTGCTGGTAGCTTTTCCATTCTGTGGAGCTGCCGTTCC	15	+	57699351-57699400	15q22.2a	Homo sapiens glucosaminyl (N-acetyl) transferase 3, mucin type (GCNT3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9988682] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9988682] [evidence NAS]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 9988682] [evidence TAS]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R [goid 3829] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R = UDP + N-acetyl-beta-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-D-glucosaminyl-R [goid 8109] [pmid 9988682] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	C2/4GnT; GnT-M; C2GnT-M; C2GnT2	C2/4GnT; GnT-M; C2GnT-M; C2GnT2
Homo sapiens	RefSeq	NM_022363.2	ILMN_173766	LHX5	NM_022363.2	NM_022363.2		64211	30795197	NM_022363.2	LHX5	NP_071758.1	ILMN_1754815	0000160050	S	1831	AAGCAGCCTCCTGAAACCAAAACGCCCGACGCAGACGCGGTGGGAGACGT	12	-	113900897-113900946	12q24.13b	Homo sapiens LIM homeobox 5 (LHX5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the cerebellum over time, from its formation to the mature structure. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. In mice, the cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21549] [evidence IEA]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IEA]; The process that mediates the transfer of information from Purkinje cells to granule cell precursors resulting in an increase in rate of granule cell precursor cell proliferation [goid 21937] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC129689	MGC129689
Homo sapiens	RefSeq	NM_018081.1	ILMN_1814	WDR79	NM_018081.1	NM_018081.1		55135	8922395	NM_018081.1	WDR79	NP_060551.1	ILMN_1693669	0002260630	S	1770	GCGAGAAAGGGCAGGGAGGAACGGAGGGAGGTGTGGGTGAGCTGATATAA	17	+	7547480-7547529	17p13.1d	Homo sapiens WD repeat domain 79 (WDR79), mRNA.				WRAP53; FLJ10385	WRAP53; FLJ10385
Homo sapiens	RefSeq	NM_173620.1	ILMN_24743	HEXDC	NM_173620.2	NM_173620.2		284004	150456448	NM_173620.2	HEXDC	NP_775891.2	ILMN_1741180	0003840370	S	2116	CCCTGGGGGAGAGACTAGAAAACACAGAAGGAAGCAGCACAGGGAGACCC	17	+	77993699-77993748	17q25.3g	Homo sapiens hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing (HEXDC), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	FLJ23825	FLJ23825
Homo sapiens	RefSeq	NM_145040.2	ILMN_26260	PRKCDBP	NM_145040.2	NM_145040.2		112464	47132586	NM_145040.2	PRKCDBP	NP_659477.2	ILMN_1793476	0007550307	S	801	AAATGGAGAGTGTAGCCTGAGGGCTGGTGTTGCCTGCCTCCCCTGTGCTT	11	-	6340362-6340392:6340393-6340411	11p15.4c	Homo sapiens protein kinase C, delta binding protein (PRKCDBP), mRNA.		Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]		HSRBC; MGC20400; SRBC	HSRBC; MGC20400; SRBC
Homo sapiens	RefSeq	XM_926130.1	ILMN_38908	LOC642678	XM_926130.1	XM_926130.1		642678	88953303	XM_926130.1	LOC642678	XP_931223.1	ILMN_1796206	0002350121	S	830	TGCAGACCCTATATGCCTGCGTCTAATGTGCCTTCCTCAGACTGCTGTGG	2	-	91249727-91249749:91250257-91250283	2p11.1d	PREDICTED: Homo sapiens similar to myeloid/lymphoid or mixed-lineage leukemia 3 isoform 2 (LOC642678), mRNA.					
Homo sapiens	RefSeq	XM_931973.1	ILMN_40214	LOC644012	XM_931973.1	XM_931973.1		644012	89041912	XM_931973.1	LOC644012	XP_937066.1	ILMN_1743287	0000580646	S	599	GAGGCGGGGAGGCCAAGACTCAGGAGACCATTGAGGGGCCCACCCAGCAT	17	-	77050566-77050599:77062803-77062818	17q25.3f	PREDICTED: Homo sapiens hypothetical LOC644012 (LOC644012), mRNA.					
Homo sapiens	RefSeq	XM_927336.1	ILMN_39898	LOC644113	XM_927336.1	XM_927336.1		644113	89027706	XM_927336.1	LOC644113	XP_932429.1	ILMN_1769024	0002360241	S	432	ATGCCATATGTGCCTCTGGCTTATTGCCCAGTTAATTGTAGTCTCAGGCT	8	-	142341-142390		PREDICTED: Homo sapiens hypothetical protein LOC644113 (LOC644113), mRNA.					
Homo sapiens	RefSeq	XM_928665.3	ILMN_43944	FAM90A14	XM_928665.3	XM_928665.3		645651	169172849	XM_928665.3	FAM90A14	XP_933758.1	ILMN_3244051	0001780630	S	204	GTGGTCCAATTAAAAGGTGGCCCAACAGTCCACCCCTGAAAAAGGCGGTC	8	+	7608907-7608922:7610319-7610352	8p23.1e	PREDICTED: Homo sapiens family with sequence similarity 90, member A14 (FAM90A14), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_001005183.1	ILMN_22263	OR6C76	NM_001005183.1	NM_001005183.1		390326	52421785	NM_001005183.1	OR6C76	NP_001005183.1	ILMN_1651940	0006940079	S	441	GGCTGGTTTCTTGGTAATTTTTCCACCACTGGCCATGGGCTTACAGCTGG	12	+	54106745-54106794	12q13.2b	Homo sapiens olfactory receptor, family 6, subfamily C, member 76 (OR6C76), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_013381.1	ILMN_15429	TRHDE	NM_013381.1	NM_013381.1		29953	7019560	NM_013381.1	TRHDE	NP_037513.1	ILMN_1797063	0001660523	S	2553	GCTGGCCTGCAGTTTTGGCAACAAGCACTGTCACCAACAGGCATCAACAC	12	+	71301715-71301764	12q21.1a-q21.1b	Homo sapiens thyrotropin-releasing hormone degrading enzyme (TRHDE), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10491199] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10491199] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10491199] [evidence TAS]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 10491199] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRH-DE; FLJ22381; PAP-II; PGPEP2	TRH-DE; FLJ22381; PAP-II; PGPEP2
Homo sapiens	RefSeq	NM_024891.1	ILMN_28082	FLJ11783	NM_024891.1	NM_024891.1		79951	13376342	NM_024891.1	FLJ11783	NP_079167.1	ILMN_1679003	0000830445	S	1142	AACCCGCCTTCTGACAGAGCAAGGAGGACATGATGGGGGCGTGTTCCTTG	11	+	117814732-117814781	11q23.3d	Homo sapiens hypothetical protein FLJ11783 (FLJ11783), mRNA.					
Homo sapiens	RefSeq	NM_177937.1	ILMN_16902	GOLM1	NM_177937.1	NM_177937.1		51280	29550849	NM_177937.1	GOLM1	NP_808800.1	ILMN_1737011	0006250398	I	82	GTGACAACCGAGGCGAGATGATGGTCAACAGGGAATGCCTCGTGGGAGAA	9	-	87904772-87904821	9q21.33b	Homo sapiens golgi membrane protein 1 (GOLM1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10831838] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10831838] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			bA379P1.3; GP73; FLJ23608; FLJ22634; C9orf155; PSEC0257; GOLPH2	bA379P1.3; FLJ23608; FLJ22634; C9orf155; PSEC0257; GP73; GOLPH2
Homo sapiens	RefSeq	NM_016548.2	ILMN_16902	GOLM1	NM_177937.1	NM_177937.1		51280	29550849	NM_177937.1	GOLM1	NP_808800.1	ILMN_1766405	0004180364	A	2580	GGTAAGTAGGAGGATCCACAGGATTTGAGATGCTAAGGCCCCAGAGATCG	9	-	87831293-87831342	9q21.33b	Homo sapiens golgi membrane protein 1 (GOLM1), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10831838] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10831838] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			bA379P1.3; GP73; FLJ23608; FLJ22634; C9orf155; PSEC0257; GOLPH2	PSEC0257; GP73
Homo sapiens	RefSeq	XR_000564.1	ILMN_35247	LOC440082	XR_000564.1	XR_000564.1		440082	89035357	XR_000564.1	LOC440082		ILMN_1734536	0007510402	A	3772	TCGCCCCCACTTGGTCCTGATCCTGCCATGTAAGACTCCTGCTCCAGCTT	12	+	10900970-10901019	12p13.2b	PREDICTED: Homo sapiens hypothetical gene supported by AK131474 (LOC440082), misc RNA.					
Homo sapiens	RefSeq	XM_940087.1	ILMN_41820	LOC646567	XM_929503.2	XM_929503.2		646567	113404716	XM_929503.2	LOC646567	XP_934596.1	ILMN_1700950	0007160324	S	56	TGAAGAAGCCGCCCTGGCTGCACATGCTGTCGGCCATGACTGTATGCTCT	1	-	27185313-27185362	1p36.11a	PREDICTED: Homo sapiens similar to HSPC307 (LOC646567), mRNA.					
Homo sapiens	RefSeq	NM_001031703.1	ILMN_40105	C3ORF75	NM_001031703.2	NM_001031703.2		54859	89145414	NM_001031703.2	C3orf75	NP_001026873.2	ILMN_1708382	0004210102	I	1229	CAAGCCTTTCAGAGCCAGAGTGGGTATAGATGTGCCAGCCAGGAGATGGC	3	-	47537200-47537249	3p21.31g	Homo sapiens chromosome 3 open reading frame 75 (C3orf75), mRNA.				FLJ20211	FLJ20211
Homo sapiens	RefSeq	NM_001031703.2	ILMN_40105	C3ORF75	NM_001031703.2	NM_001031703.2		54859	89145414	NM_001031703.2	C3orf75	NP_001026873.2	ILMN_3241169	0001850500	S	1015	TATTTCAGGCTGGACCGGCGACTCCACTGTGACCAGAGGGTTGAGTGCTG	3	-	47537414-47537463	3p21.31g	Homo sapiens chromosome 3 open reading frame 75 (C3orf75), mRNA.				FLJ20211	FLJ20211
Homo sapiens	RefSeq	NM_001031703.1	ILMN_40105	C3ORF75	NM_001031703.2	NM_001031703.2		54859	89145414	NM_001031703.2	C3orf75	NP_001026873.2	ILMN_1724990	0006220014	A	733	ATCTGATACTGCGGGCTGAGGGCCTGGCCACTGGCTTCTGCAGGGATGTG	3	-	47539784-47539833	3p21.31g	Homo sapiens chromosome 3 open reading frame 75 (C3orf75), mRNA.				FLJ20211	FLJ20211
Homo sapiens	RefSeq	NM_203402.1	ILMN_164627	FIT1	NM_203402.1	NM_203402.1		161247	42822881	NM_203402.1	FIT1	NP_981947.1	ILMN_1764557	0006660187	S	840	CATGGGCTCTTCCCCCGTCCCCACTCCAGCCGCAAGCATAACTGAAAGAA	14	+	23671828-23671872:23671873-23671877	14q12a	Homo sapiens fat-inducing transcript 1 (FIT1), mRNA.				MGC46490	MGC46490
Homo sapiens	RefSeq	XM_927327.1	ILMN_42034	LOC644100	XM_927327.1	XM_927327.1		644100	88984894	XM_927327.1	LOC644100	XP_932420.1	ILMN_1702960	0003390082	S	328	GCCATCGTCACTGAGTCAGGAGAGGTCATCAGCACGCTGCCGTTTAATGT	5	+	115422484-115422533	5q23.1a	PREDICTED: Homo sapiens similar to CG14464-PA.3 (LOC644100), mRNA.					
Homo sapiens	RefSeq	NM_000396.2	ILMN_16923	CTSK	NM_000396.2	NM_000396.2		1513	23110958	NM_000396.2	CTSK	NP_000387.1	ILMN_1758895	0001430278	S	1352	AGGCTAAGAGATGTGACTACAGCCTGCCCCTGACTGTGTTGTCCCAGGGC	1	-	150768987-150769036	1q21.2c	Homo sapiens cathepsin K (CTSK), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 7818555] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [pmid 9143502] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17889653] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	CTSO2; CTSO; CTSO1; PKND; CTS02; PYCD; MGC23107	CTSO2; CTSO; CTSO1; PKND; CTS02; PYCD; MGC23107
Homo sapiens	RefSeq	XR_038876.1	ILMN_338808	LOC729142	XR_038876.1	XR_038876.1		729142	169184504	XR_038876.1	LOC729142		ILMN_3299579	0001170348	M	1756	GTACTGGGGAGCAGGTAGGTAAAGGGGGAGTGGGAAGGGATGGAACTGAC				10q22.2b	PREDICTED: Homo sapiens misc_RNA (LOC729142), miscRNA.					
Homo sapiens	RefSeq	NM_173351.1	ILMN_18214	OR6B3	NM_173351.1	NM_173351.1		150681	50051734	NM_173351.1	OR6B3	NP_775486.1	ILMN_1786267	0005130056	S	923	CGAGCTGCGCCGTAGAGGGGAGGCTTTCTAGTCTTCTGGAACTTCATCTC	2	-	240984517-240984566	2q37.3e	Homo sapiens olfactory receptor, family 6, subfamily B, member 3 (OR6B3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR6B3Q; OR6B3P	OR6B3Q; OR6B3P
Homo sapiens	RefSeq	NM_001008735.1	ILMN_22757	HMGB1L1	NM_001008735.1	NM_001008735.1		10357	56806672	NM_001008735.1	HMGB1L1	NP_001008735.1	ILMN_3239336	0005260471	S	194	AGGCGGACAAGACCCATTATGAAAGACAAATGAAAACCTATATCCCTCCC	20	-	56063840-56063889	20q13.31a	Homo sapiens high-mobility group box 1-like 1 (HMGB1L1), mRNA.				HMG1L7; dJ579F20.1	HMG1L7; dJ579F20.1
Homo sapiens	RefSeq	NM_001008735.1	ILMN_22757	HMGB1L1	NM_001008735.1	NM_001008735.1		10357	56806672	NM_001008735.1	HMGB1L1	NP_001008735.1	ILMN_2211800	0003990202	S	384	ACTGGGAGAGATGTGGAATAACACTGCTGCAGATGACAAGCAGCCTGGTG	20	-	56063650-56063699	20q13.31a	Homo sapiens high-mobility group box 1-like 1 (HMGB1L1), mRNA.				HMG1L7; dJ579F20.1	HMG1L7; dJ579F20.1
Homo sapiens	RefSeq	NM_001008735.1	ILMN_22757	HMGB1L1	NM_001008735.1	NM_001008735.1		10357	56806672	NM_001008735.1	HMGB1L1	NP_001008735.1	ILMN_1809439	0006330039	S	124	TCTAACAAGTGCTCAGAGAGGTGGAAGACCATGTCTGCTAAAGAGAAAGG	20	-	56063910-56063959	20q13.31a	Homo sapiens high-mobility group box 1-like 1 (HMGB1L1), mRNA.				HMG1L7; dJ579F20.1	HMG1L7; dJ579F20.1
Homo sapiens	RefSeq	NM_015630.2	ILMN_26742	EPC2	NM_015630.2	NM_015630.2		26122	21361488	NM_015630.2	EPC2	NP_056445.2	ILMN_1656496	0000630750	S	3342	AGCCATCCCAGGTGTTGGGCGGGGGGAGGGTTGTGGCAAGATTGTCTTTT	2	+	149261315-149261364	2q23.1b	Homo sapiens enhancer of polycomb homolog 2 (Drosophila) (EPC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]		DKFZP566F2124	DKFZP566F2124
Homo sapiens	RefSeq	NM_001172.3	ILMN_15065	ARG2	NM_001172.3	NM_001172.3		384	52426739	NM_001172.3	ARG2	NP_001163.1	ILMN_1800898	0005720725	S	1800	CATTTTGGGGTTAGACCTGGGACCACGGCTGGATACTCTGAGGCTGTATG	14	+	67188009-67188058	14q24.1a	Homo sapiens arginase, type II (ARG2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8898077] [evidence TAS]	A cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea [goid 50] [evidence IEA]; The chemical reactions and pathways involving arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6525] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [pmid 8898077] [evidence TAS]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea [goid 4053] [pmid 9144563] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_013443.3	ILMN_21925	ST6GALNAC6	NM_013443.3	NM_013443.3		30815	34147672	NM_013443.3	ST6GALNAC6	NP_038471.2	ILMN_1691736	0003780608	S	2128	GATGGCTGTCGGGAGCTGTATCACCTGGGTTCTGTCCCCTGGCTCTGTAT	9	-	130647821-130647870	9q34.11a	Homo sapiens ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 (ST6GALNAC6), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10702226] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10702226] [evidence TAS]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 10702226] [evidence TAS]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide [goid 6688] [pmid 10702226] [evidence TAS]	Catalysis of the formation of sialylglycoconjugates via transfer of the sialic acid group from CMP to one of several glycoconjugate acceptors [goid 8373] [pmid 10702226] [evidence TAS]	RP11-203J24.3; ST6GALNACVI; SIAT7F	RP11-203J24.3; ST6GALNACVI; SIAT7F
Homo sapiens	RefSeq	NM_024878.1	ILMN_25363	PHF20L1	NM_024878.1	NM_024878.1		51105	39653320	NM_024878.1	PHF20L1	NP_079154.1	ILMN_1700591	0006900427	I	105	ATATTGTTATCTCTATATTTATGTTTATGTAGTTACCTGTGAAAGTAGCT	8	+	133885109-133885158	8q24.22b	Homo sapiens PHD finger protein 20-like 1 (PHF20L1), transcript variant 4, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	CGI-72; MGC64923	CGI-72; MGC64923
Homo sapiens	RefSeq	NM_021101.3	ILMN_177119	CLDN1	NM_021101.3	NM_021101.3		9076	21536297	NM_021101.3	CLDN1	NP_066924.1	ILMN_1724686	0005960296	S	2967	GTGCTATCTGTTCAGTGATGCCCTCAGAGCTCTTGCTGTTAGCTGGCAGC	3	-	191506599-191506648	3q28c	Homo sapiens claudin 1 (CLDN1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9647647] [evidence TAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9647647] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction [goid 16338] [evidence ISS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence ISS]	SEMP1; ILVASC; CLD1	SEMP1; ILVASC; CLD1
Homo sapiens	RefSeq	XM_942130.1	ILMN_179921	KCMF1	XM_001133393.1	XM_001133393.1		56888	113413865	XM_001133393.1	KCMF1	XP_001133393.1	ILMN_1669669	0003290360	A	1982	CCTGTCGCCCTGTTAGTCATCTTGCCTGTGTGGAGCTCAGCCTGTCTCTT				2p11.2g	PREDICTED: Homo sapiens potassium channel modulatory factor 1 (KCMF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_020122.3	ILMN_179921	KCMF1	XM_001133393.1	XM_001133393.1		56888	113413865	XM_001133393.1	KCMF1	XP_001133393.1	ILMN_1779480	0001940327	A	1917	AAGCCAGCTCTGCAGTGGAATCTGGGGATTATAGCCGGGTGTGGCACTCC				2p11.2g	PREDICTED: Homo sapiens potassium channel modulatory factor 1 (KCMF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		ZZZ1; PCMF; DKFZP434L1021; DEBT91; FIGC
Homo sapiens	RefSeq	NM_000516.3	ILMN_6801	GNAS	NM_016592.2	NM_016592.2		2778	117938763	NM_016592.2	GNAS	NP_057676.1	ILMN_1769191	0006100075	A	2163	GCGCATGCACCTTCGTCAGTACGAGCTGCTCTAAGAAGGGAACCCCCAAA	20	+	56919246-56919295	20q13.32a-q13.32b	Homo sapiens GNAS complex locus (GNAS), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [pmid 9159128] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9727013] [evidence TAS]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [pmid 7997272] [evidence IDA]; The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network [goid 32588] [pmid 7997272] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 10729789] [evidence NAS]; The regulated release of proteins from a cell or group of cells [goid 9306] [pmid 10729789] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA];  [goid 6112] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA];  [goid 6112] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 9159128] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 3018580] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]; The directed movement of substances within a cell [goid 46907] [pmid 7997272] [evidence NAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA];  [goid 6112] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9159128] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	MGC33735; GSP; PHP1A; C20orf45; AHO; GPSA; GNAS1; dJ309F20.1.1; GSA; PHP1B; POH; dJ806M20.3.3	XL2; NESP55; XL; GNASXL; PHP1A; C20orf45; GNAS1; GPSA; dJ309F20.1.1; GSA; PHP1B; POH; MGC33735; GSP; AHO; NESP; XLalphas; dJ806M20.3.3
Homo sapiens	RefSeq	NM_016592.1	ILMN_6801	GNAS	NM_016592.2	NM_016592.2		2778	117938763	NM_016592.2	GNAS	NP_057676.1	ILMN_1804283	0002350181	I	821	CACTCCACCTTCGGCCAGTCCCTCACCCAGCGTCTGCACGCTCTCAAGTT	20	+	56849010-56849059	20q13.32a-q13.32b	Homo sapiens GNAS complex locus (GNAS), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [pmid 9159128] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9727013] [evidence TAS]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [pmid 7997272] [evidence IDA]; The lipid bilayer surrounding any of the compartments that make up the trans-Golgi network [goid 32588] [pmid 7997272] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 10729789] [evidence NAS]; The regulated release of proteins from a cell or group of cells [goid 9306] [pmid 10729789] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA];  [goid 6112] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA];  [goid 6112] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 9159128] [evidence TAS]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 3018580] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]; The directed movement of substances within a cell [goid 46907] [pmid 7997272] [evidence NAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA];  [goid 6112] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process by which the anatomical structures of the post-embryonic soma are generated and organized. Morphogenesis pertains to the creation of form [goid 40032] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [evidence IEA]; The process by which the anatomical structures of cranial skeleton are generated and organized during the embryonic phase. Morphogenesis pertains to the creation of form [goid 48701] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9159128] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	MGC33735; GSP; PHP1A; C20orf45; AHO; GPSA; GNAS1; dJ309F20.1.1; GSA; PHP1B; POH; dJ806M20.3.3	XL2; NESP55; XL; GNASXL; PHP1A; C20orf45; GNAS1; GPSA; dJ309F20.1.1; GSA; PHP1B; POH; MGC33735; GSP; AHO; NESP; XLalphas; dJ806M20.3.3
Homo sapiens	RefSeq	NM_002379.2	ILMN_29983	MATN1	NM_002379.2	NM_002379.2		4146	13518035	NM_002379.2	MATN1	NP_002370.1	ILMN_2061116	0001400142	S	2225	GAGTGTGAGAGTGATAATGCAGGGGTGAGTGTGAGAGGGACTGCGTTTGC	1	-	30958721-30958770	1p35.2b	Homo sapiens matrilin 1, cartilage matrix protein (MATN1), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 2246248] [evidence TAS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9083061] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 9083061] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CMP; CRTM	CMP; CRTM
Homo sapiens	Unigene	Hs.104091	ILMN_74815	HS.104091	Hs.104091		Hs.104091		47321929	CN305515			ILMN_1851020	0001300632	S	646	TGCAGGGGAAGGTGGCAGCAAATGGCACAGAAACCCACCTGACCACAGAC	9	+	32444204-32444209:32444211-32444254		17000532611997 GRN_EB Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	NM_182838.1	ILMN_8692	SLC35E2	NM_182838.1	NM_182838.1		9906	33469136	NM_182838.1	SLC35E2	NP_878258.1	ILMN_1651209	0002940221	S	1103	TCACGGCGTACGCCCTCATGGGGAAAATCTCCCCGGTGACTTTCAGGTCC	1	-	1667141-1667190	1p36.33a	Homo sapiens solute carrier family 35, member E2 (SLC35E2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC117254; MGC138494; DKFZp686M0869; FLJ34996; FLJ44537; MGC126715; MGC104754; KIAA0447	FLJ44537; MGC126715; MGC117254; MGC104754; MGC138494; DKFZp686M0869; KIAA0447; FLJ34996
Homo sapiens	RefSeq	XM_942783.1	ILMN_33469	LOC642212	XM_942783.1	XM_942783.1		642212	89037143	XM_942783.1	LOC642212	XP_947876.1	ILMN_1655510	0001770673	S	241	ACATCTGCTAAGTAAGCCTACAAAATACTACTAAACAACACCAAACACAT					PREDICTED: Homo sapiens hypothetical protein LOC642212 (LOC642212), mRNA.					
Homo sapiens	RefSeq	NR_003319.1	ILMN_170099	SNORD116-4	NR_003319.1	NR_003319.1		100033416	126012499	NR_003319.1	SNORD116-4		ILMN_2067520	0004610458	S	48	AACAAAATGAGTGAAAACTCATACCGTCGTTCTCAGCGGAACTGAGGTCC	15	+	22855824-22855873	15q11.2e	Homo sapiens small nucleolar RNA, C/D box 116-4 (SNORD116-4), small nucleolar RNA.				HBII-85-4	HBII-85-4
Homo sapiens	RefSeq	XM_940847.3	ILMN_33208	LOC390937	XM_940847.3	XM_940847.3		390937	169214364	XM_940847.3	LOC390937	XP_945940.3	ILMN_3284433	0000870270	M	1173	AGAGGCTGCCCTTGGTGGGAAGGAGGACAGCGACTCGGAGCTGGAGATCA				19q13.2c	PREDICTED: Homo sapiens similar to hCG2040171 (LOC390937), mRNA.					
Homo sapiens	RefSeq	NM_013254.2	ILMN_11417	TBK1	NM_013254.2	NM_013254.2		29110	19743810	NM_013254.2	TBK1	NP_037386.1	ILMN_1739967	0000780598	S	2643	CGTTTGTAAATGGTAGAACGGTGGCTACTGTGAGTGGGGAGCAGAACCGC	12	+	63181819-63181868	12q14.2b	Homo sapiens TANK-binding kinase 1 (TBK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12692549] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16887178] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	T2K; NAK; FLJ11330	T2K; NAK; FLJ11330
Homo sapiens	RefSeq	NM_014550.3	ILMN_28765	CARD10	NM_014550.3	NM_014550.3		29775	51093860	NM_014550.3	CARD10	NP_055365.2	ILMN_1743714	0003840678	S	3639	CCTCACATGGGTGTCTGTGGTTCTCTCCTGTGTAAATGTCACGCCCCACC	22	-	37886610-37886659	22q13.1a	Homo sapiens caspase recruitment domain family, member 10 (CARD10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11259443] [evidence NAS]; A protein complex comprising Carma1, Bcl10 and MALT1; plays a role in signal transduction during NF-kappaB activation [goid 32449] [pmid 15125833] [evidence NAS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 11259443] [evidence NAS]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 11259443] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 11259443] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11259443] [evidence IPI]; Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [pmid 11259443] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11259443] [evidence ISS]	CARMA3; BIMP1; MGC142219	CARMA3; BIMP1; MGC142219
Homo sapiens	RefSeq	XR_039615.1	ILMN_339655	LOC100133129	XR_039615.1	XR_039615.1		100133129	169202028	XR_039615.1	LOC100133129		ILMN_3281327	0006960736	M	2581	AGTTGAGATCAGGAGTTCGAGACCAGCTTGGCTGACACAGCAAAACCCCA	11	-	113195232-113195281	11q23.2a	PREDICTED: Homo sapiens misc_RNA (LOC100133129), miscRNA.					
Homo sapiens	RefSeq	NM_000332.2	ILMN_15187	ATXN1	NM_000332.2	NM_000332.2		6310	51479157	NM_000332.2	ATXN1	NP_000323.2	ILMN_1800951	0000520601	S	10134	GCCAAGGGAAAACAGACACCAGAACTTGGGTTGAGGGCACTACCAGACTG	6	-	16407774-16407823	6p22.3f-p22.3e	Homo sapiens ataxin 1 (ATXN1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7647801] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12757932] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7647801] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 17557114] [evidence IDA]; A complex of NXF1 and NXF2 required for the export of the majority of mRNAs from the nucleus to the cytoplasm; localized in the nucleoplasm and at both the nucleoplasmic and cytoplasmic faces of the nuclear pore complex; shuttles between the nucleus and the cytoplasm [goid 42272] [pmid 15615787] [evidence IDA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [pmid 15615787] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 15615787] [evidence NAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15016912] [evidence IDA]; The directed movement of substances out of the nucleus [goid 51168] [pmid 15615787] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 15016912] [evidence IPI]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 12757932] [evidence IPI]; Interacting selectively with a sequence of uracil residues in an RNA molecule [goid 8266] [pmid 11136710] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 15016912] [evidence IDA]; Interacting selectively with a sequence of guanine residues in an RNA molecule [goid 34046] [pmid 11136710] [evidence IDA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16713569] [evidence IPI]; Interacting selectively with a domain within the same polypeptide [goid 43621] [pmid 9097953] [evidence IDA]	SCA1; D6S504E; ATX1	SCA1; D6S504E; ATX1
Homo sapiens	RefSeq	NM_198046.1	ILMN_27357	ZDHHC16	NM_198046.1	NM_198046.1		84287	37594448	NM_198046.1	ZDHHC16	NP_932163.1	ILMN_1664946	0002100768	I	289	AGTCAGTGGGATTGTCAAGGACAAAGCCCTCCCTGGCTGCCTCAGGGCAA	10	+	99200228-99200277	10q24.1b	Homo sapiens zinc finger, DHHC-type containing 16 (ZDHHC16), transcript variant 5, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	APH2; MGC2993	APH2; MGC2993
Homo sapiens	RefSeq	NM_001789.2	ILMN_174259	CDC25A	NM_001789.2	NM_001789.2		993	42490757	NM_001789.2	CDC25A	NP_001780.2	ILMN_1733396	0004670670	I	811	GAAGCCAGTAAGACCTGTATCTCGTGGCTGCCTGCACTCTCATGGACTCC	3	-	48222263-48222312	3p21.31f	Homo sapiens cell division cycle 25 homolog A (S. pombe) (CDC25A), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1828290] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12399544] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10454565] [evidence EXP]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 11139144] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11139144] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17292828] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CDC25A2	CDC25A2
Homo sapiens	RefSeq	NM_001789.2	ILMN_174259	CDC25A	NM_001789.2	NM_001789.2		993	42490757	NM_001789.2	CDC25A	NP_001780.2	ILMN_1711005	0002480341	A	3330	GGTGCCAGCCTCCTTACCATCACGGCTTCACTGAGGTGTAGGTGGGTTTT	3	-	48199787-48199836	3p21.31f	Homo sapiens cell division cycle 25 homolog A (S. pombe) (CDC25A), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1828290] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12399544] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10454565] [evidence EXP]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 11139144] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11139144] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17292828] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CDC25A2	CDC25A2
Homo sapiens	RefSeq	NM_002438.1	ILMN_165835	MRC1	NM_002438.2	NM_002438.2		4360	145312260	NM_002438.2	MRC1	NP_002429.1	ILMN_1810264	0003290487	S	1281	AGGAAGGCGGTGACCTCACAAGTATCCACACCATCGAGGAATTGGACTTT	10	+	18138472-18138521	10p12.33c-p12.33b	Homo sapiens mannose receptor, C type 1 (MRC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2373685] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1294118] [evidence TAS]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [pmid 2373685] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 2373685] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [pmid 2373685] [evidence TAS]	CD206; CLEC13D	CD206; CLEC13D
Homo sapiens	RefSeq	NM_006095.1	ILMN_7068	ATP8A1	NM_006095.1	NM_006095.1		10396	17978470	NM_006095.1	ATP8A1	NP_006086.1	ILMN_1778358	0000520634	S	3534	AGGAGAGCTACCAGGTTGTCACCGCAGTCTGCTAACCAATTCCAGTCTGG	4	-	42109601-42109650	4p13c	Homo sapiens ATPase, aminophospholipid transporter (APLT), Class I, type 8A, member 1 (ATP8A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]; The directed movement of aminophospholipids into, out of, within or between cells. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group [goid 15917] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in) [goid 19829] [pmid 10198212] [evidence NAS]	MGC130043; ATPIA; MGC26327; ATPASEII; MGC130042; ATPP2	MGC130043; ATPIA; MGC26327; ATPASEII; MGC130042; ATPP2
Homo sapiens	RefSeq	NM_000985.2	ILMN_137046	RPL17	NM_000985.2	NM_000985.2		6139	14591906	NM_000985.2	RPL17	NP_000976.1	ILMN_1655422	0002000593	S	31	CTGGATTGGTGAGGCCCGTGTGGCTACTTCTGTGGAAGCAGTGCTGTAGT	18	-	45272145-45272194	18q21.1f	Homo sapiens ribosomal protein L17 (RPL17), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	rpL23	rpL23
Homo sapiens	RefSeq	XR_001413.1	ILMN_138327	NAPSB	XR_001413.1	XR_001413.1		256236	89057677	XR_001413.1	NAPSB		ILMN_1723043	0002570176	A	191	GGGACAAGCCTGCCTCGGTACCTCTCTCCAAATTCCTGGATGCCCAGTAT				19q13.33c	PREDICTED: Homo sapiens napsin B aspartic peptidase pseudogene, transcript variant 3 (NAPSB), misc RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10591213] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10591213] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	NM_001042442.1	ILMN_163030	CAST	NM_001042442.1	NM_001042442.1		831	109637762	NM_001042442.1	CAST	NP_001035907.1	ILMN_2322806	0006560136	A	4287	CTGGAGTAAGCTACAGGATCTAAAGCAGCCCTTTTTACAGTCTAGTTAGG	5	+	96108707-96108756	5q15d	Homo sapiens calpastatin (CAST), transcript variant 8, mRNA.			Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue [goid 30161] [evidence IEA]; Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue [goid 30161] [evidence IEA]; Stops, prevents or reduces the activity of the enzyme calpain, which catalyzes of the preferential cleavage of Tyr-Xaa, Met-Xaa or Arg-Xaa with Leu or Val as the P2 residue [goid 30161] [evidence IEA]	MGC9402; BS-17	MGC9402; BS-17
Homo sapiens	RefSeq	NM_203429.1	ILMN_22589	DSCR8	NM_203429.1	NM_203429.1		84677	44680118	NM_203429.1	DSCR8	NP_982253.1	ILMN_1758066	0004280504	I	360	GAAGGCTGGCTCATACATTTTCCCAGACAGGAATTTGGCTGCCAACAGGG	21	+	38416506-38416555	21q22.13b	Homo sapiens Down syndrome critical region gene 8 (DSCR8), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MTAG2; C21orf65; MMA-1	MTAG2; C21orf65; MMA-1
Homo sapiens	RefSeq	NM_001017922.1	ILMN_26588	ERMAP	NM_001017922.1	NM_001017922.1		114625	63054854	NM_001017922.1	ERMAP	NP_001017922.1	ILMN_1785387	0002940176	I	36	GAAAATGGCGGTCGCTGGAGCCGCCGACCAAGAGGCTTGGGAGTCTGTAC	1	+	43055398-43055447	1p34.2a	Homo sapiens erythroblast membrane-associated protein (Scianna blood group) (ERMAP), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11549310] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			SC; MGC118813; PRO2801; MGC118810; MGC118811; MGC118812; RD	SC; MGC118813; PRO2801; MGC118810; MGC118811; MGC118812; RD
Homo sapiens	RefSeq	NM_001767.2	ILMN_177433	CD2	NM_001767.2	NM_001767.2		914	31542293	NM_001767.2	CD2	NP_001758.1	ILMN_1695025	0004210619	S	1192	GGCCACAGCCACCTCTGCATCTTCGAACTCAGCCATGTGGTCAACATCTG	1	+	117113051-117113100	1p13.1b	Homo sapiens CD2 molecule (CD2), mRNA.	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7544493] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The clustering and aggregation of membrane rafts at a single cellular pole during activation of particular cell types, such as lymphocytes [goid 1766] [pmid 11376005] [evidence TAS]; The clustering and aggregation of membrane rafts at a single cellular pole during activation of particular cell types, such as lymphocytes [goid 1766] [pmid 11591762] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9270771] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10575274] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10575274] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 7544493] [evidence NAS]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [pmid 12714509] [evidence NAS]; Any process that stimulates, induces or increases the rate of myeloid dendritic cell activation [goid 30887] [pmid 12714509] [evidence NAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 2471997] [evidence TAS]; Any process that modulates the frequency, rate or extent of T cell differentiation [goid 45580] [pmid 11544295] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7544493] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12356317] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12356317] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7544493] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1970422] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7544493] [evidence ISS]	SRBC; T11	SRBC; T11
Homo sapiens	RefSeq	NM_001004332.1	ILMN_12773	FLJ41170	NM_001004332.1	NM_001004332.1		440200	51972243	NM_001004332.1	FLJ41170	NP_001004332.1	ILMN_1722632	0002850022	S	1298	GATCCCCACTCACCTCCACCCCATCCTTCCAGGCTTCTGATCCTCATTGT	14	+	100542695-100542744	14q32.31a	Homo sapiens FLJ41170 protein (FLJ41170), mRNA.					
Homo sapiens	RefSeq	XM_936551.1	ILMN_137240	FLJ36144	XM_936551.1	XM_936551.1		283685	89038821	XM_936551.1	FLJ36144	XP_941644.1	ILMN_1659333	0006760743	I	1703	AGCTGGAAGAGGACGGCAGCAAAAGGCGGGTAACTGGTTCTCTGGTTGTT				15q11.2c	PREDICTED: Homo sapiens hypothetical protein FLJ36144 (FLJ36144), mRNA.					
Homo sapiens	RefSeq	NM_001017921.1	ILMN_2595	VMAC	NM_001017921.2	NM_001017921.2		400673	84992991	NM_001017921.2	VMAC	NP_001017921.1	ILMN_1789467	0002320050	S	600	TGCAGGGGGACCCTACGGCAGAGCCAAAGTCCTGTCTAAGCATCAGAACA	19	+	5860235-5860284	19p13.3b	Homo sapiens vimentin-type IF-associated coiled-coil protein (VMAC), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC131658	
Homo sapiens	RefSeq	NM_181784.1	ILMN_12131	SPRED2	NM_181784.1	NM_181784.1		200734	32401444	NM_181784.1	SPRED2	NP_861449.1	ILMN_1791232	0003190750	S	3832	TCTGTCCAGAAGCCTCCCCGACCCCCCAAGCTATTTGCTCACATTAACAA	2	-	65391704-65391753	2p14c	Homo sapiens sprouty-related, EVH1 domain containing 2 (SPRED2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction [goid 9966] [evidence IEA]	Interacting selectively with the stem cell factor receptor (SCFR), a type III transmembrane kinase receptor [goid 5173] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	MGC163164; FLJ21897; FLJ31917; Spred-2	MGC163164; FLJ21897; FLJ31917; Spred-2
Homo sapiens	RefSeq	NM_014698.1	ILMN_932	TMEM63A	NM_014698.1	NM_014698.1		9725	7662307	NM_014698.1	TMEM63A	NP_055513.1	ILMN_1719649	0001740020	S	3777	GCCTGGGCTTATCTGGGCCTTCTCACTCAGGGACTCTCTTGACGCTGACT	1	-	226033487-226033536	1q42.12c	Homo sapiens transmembrane protein 63A (TMEM63A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA0489; KIAA0792; RP4-559A3.1	KIAA0489; KIAA0792; RP4-559A3.1
Homo sapiens	RefSeq	XM_001128080.2	ILMN_168485	LOC728667	XM_001128080.2	XM_001128080.2		728667	169207017	XM_001128080.2	LOC728667	XP_001128080.2	ILMN_3243652	0002650600	S	149	ACGTAGTCATCAGCAGCGGGAAGCAGCAGAACGTGGACTGGGCTGTGGCC	14	-	23366328-23366377	14q11.2g	PREDICTED: Homo sapiens similar to hCG1645561 (LOC728667), mRNA.					
Homo sapiens	RefSeq	XM_928062.1	ILMN_33845	LOC644994	XM_928062.1	XM_928062.1		644994	88986452	XM_928062.1	LOC644994	XP_933155.1	ILMN_1688445	0005340626	S	159	TCGGCTGCACAGCTCACCGTCGGACCTCTCCCCCAATCCCCATGGGCCTT	5	+	171134042-171134091	5q35.1d	PREDICTED: Homo sapiens hypothetical protein LOC644994 (LOC644994), mRNA.					
Homo sapiens	RefSeq	XM_001716408.1	ILMN_347761	LOC100130667	XM_001716408.1	XM_001716408.1		100130667	169162158	XM_001716408.1	LOC100130667	XP_001716460.1	ILMN_3267739	0005860768	M	1294	CAAGTGAGTGCAAAGGAGGGTGGACTGGGTGGCAGAAGAACAGTGACAAC				1p12a	PREDICTED: Homo sapiens hypothetical LOC100130667 (LOC100130667), mRNA.					
Homo sapiens	RefSeq	XM_931359.1	ILMN_37634	LOC338758	XM_931359.2	XM_931359.2		338758	113423435	XM_931359.2	LOC338758	XP_936452.1	ILMN_1795835	0006650035	A	2163	AACTTGCGGTATTTCGATGCTCAAAGGTAACCGGCGGCTCTGCTCCAACC	12	+	88628314-88628363	12q21.33b	PREDICTED: Homo sapiens hypothetical protein LOC338758 (LOC338758), mRNA.					
Homo sapiens	RefSeq	NM_138733.2	ILMN_15582	PGK2	NM_138733.2	NM_138733.2		5232	31543396	NM_138733.2	PGK2	NP_620061.2	ILMN_1692554	0001400452	S	1456	ACTCCTAGATCAAGACCTATGTAATGGACAAGCAGCAGGCCATCAGGAAC	6	-	49861461-49861510	6p12.3b	Homo sapiens phosphoglycerate kinase 2 (PGK2), mRNA.				PGKB; PGKPS; PGK-2; dJ417L20.2	PGKB; PGKPS; PGK-2; dJ417L20.2
Homo sapiens	RefSeq	NM_023013.1	ILMN_27897	PRAMEF1	NM_023013.1	NM_023013.1		65121	12738830	NM_023013.1	PRAMEF1	NP_075389.1	ILMN_1652670	0004290639	S	608	CAGTGGGTTTACCAAAGGAGAGGTTTAGTACACCTGTGCTGTAGTAAGCT	1	+	12776868-12776917	1p36.21d	Homo sapiens PRAME family member 1 (PRAMEF1), mRNA.				dJ1198H6.1; RP5-845O24.1	dJ1198H6.1; RP5-845O24.1
Homo sapiens	RefSeq	NM_023013.1	ILMN_27897	PRAMEF1	NM_023013.1	NM_023013.1		65121	12738830	NM_023013.1	PRAMEF1	NP_075389.1	ILMN_2112551	0006650730	S	825	GGTGCCATCATTACACGTCAGATAATGAACTCCAAGGACGGTTAGTTGCC	1	+	12777085-12777134	1p36.21d	Homo sapiens PRAME family member 1 (PRAMEF1), mRNA.				dJ1198H6.1; RP5-845O24.1	dJ1198H6.1; RP5-845O24.1
Homo sapiens	RefSeq	NM_023014.1	ILMN_27897	PRAMEF1	NM_023013.1	NM_023013.1		65121	12738830	NM_023013.1	PRAMEF1	NP_075389.1	ILMN_1709731	0003290154	I	1069	AAAGCATCTGAATCTCAGCTACGTGCTGCTGTTCCGCATCAGTCTTGAAC	1	+	12778273-12778322	1p36.21d	Homo sapiens PRAME family member 1 (PRAMEF1), mRNA.				dJ1198H6.1; RP5-845O24.1	FLJ43580; RP5-845O24.1; DJ845O24.3
Homo sapiens	RefSeq	NM_152912.3	ILMN_16655	MTIF3	NM_152912.3	NM_152912.3		219402	32306535	NM_152912.3	MTIF3	NP_690876.2	ILMN_1718271	0006560181	S	565	GAGGGAGATGGAGAAGGCGAACCCCAAAACTGGACCAACCCTGAGAAAGG	13	-	28011392-28011410:28014126-28014156	13q12.2a	Homo sapiens mitochondrial translational initiation factor 3 (MTIF3), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12095986] [evidence ISS]	Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 12095986] [evidence ISS]; The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits [goid 32790] [pmid 12095986] [evidence ISS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any part of the small ribosomal subunit [goid 43024] [pmid 12095986] [evidence ISS]	IF-3mt; IF3(mt)	IF-3mt; IF3(mt)
Homo sapiens	Unigene	Hs.272065	ILMN_84103	HS.272065	Hs.272065		Hs.272065		21753669	AK094582			ILMN_1879496	0005310653	S	1959	CCCCTAAGAGAAAGTTCAACGGCTAAGCTCAAACGTTAGTCTTGACACCT	10	+	22582965-22583014		Homo sapiens cDNA FLJ37263 fis, clone BRAMY2011064					
Homo sapiens	Unigene	Hs.528873	ILMN_101194	HS.528873	Hs.528873		Hs.528873		19016714	BM703456			ILMN_1836958	0003180338	S	299	GCTGCCACAAACGCCTCATCAAATCTAGAGGCATACCTTCCTTCAGCTTC	17	-	5032359-5032408		UI-E-CL1-afe-e-04-0-UI.r1 UI-E-CL1 Homo sapiens cDNA clone UI-E-CL1-afe-e-04-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_013986.2	ILMN_7393	EWSR1	NM_013986.2	NM_013986.2		2130	125987607	NM_013986.2	EWSR1	NP_053733.1	ILMN_2413251	0004890397	A	1954	CCTGGACCTTTGATGGAACAGATGGGAGGAAGAAGAGGAGGACGTGGAGG	22	+	28025774-28025823	22q12.2a	Homo sapiens Ewing sarcoma breakpoint region 1 (EWSR1), transcript variant EWS-b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8084618] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EWS	EWS
Homo sapiens	RefSeq	XM_001719446.1	ILMN_346828	LOC100133946	XM_001719446.1	XM_001719446.1		100133946	169216475	XM_001719446.1	LOC100133946	XP_001719498.1	ILMN_3245053	0004670433	S	1219	GCTGCTTAACTGGCACCTTTCTCAGGAAGTAATAACACCAAATATTGCTG					PREDICTED: Homo sapiens similar to mature T-cell proliferations 1 (LOC100133946), mRNA.					
Homo sapiens	RefSeq	XM_944623.1	ILMN_32464	LOC399978	XM_944623.2	XM_944623.2		399978	113423179	XM_944623.2	LOC399978	XP_949716.1	ILMN_1746502	0006380221	A	463	CTCTGGAGCCACAAGGACTGAAACTCTGCTTCAGAGACCCACCACTGATG				11q24.3c	PREDICTED: Homo sapiens hypothetical LOC399978 (LOC399978), mRNA.					
Homo sapiens	Unigene	Hs.566225	ILMN_118579	HS.566225	Hs.566225		Hs.566225		6702515	AW295949			ILMN_1838659	0001440167	S	356	CTGGGCAAAACAAACAGTGGGCTGAGGGCCAAACTGGGATGCTACGGTCC	5	+	172165627-172165676		UI-H-BI2-ahh-d-11-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2726829 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006243.2	ILMN_11331	PPP2R5A	NM_006243.2	NM_006243.2		5525	30795205	NM_006243.2	PPP2R5A	NP_006234.1	ILMN_1738784	0005870746	S	2796	TCCAGTCCTCACAACCTGTCCTTCACCTAGTCCCTCCTGACCCAGGGATG	1	+	210601496-210601545	1q32.3b	Homo sapiens protein phosphatase 2, regulatory subunit B', alpha isoform (PPP2R5A), mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8703017] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 8703017] [evidence TAS]	MGC131915; B56A; PR61A	MGC131915; B56A; PR61A
Homo sapiens	RefSeq	XM_001725660.1	ILMN_345502	LOC100131578	XM_001725660.1	XM_001725660.1		100131578	169212086	XM_001725660.1	LOC100131578	XP_001725712.1	ILMN_3287855	0005570377	M	72	CCCCATGCAGGTGTTTCAGGGCTTTACGTCATTCAAGGATGTGGCTGTGA					PREDICTED: Homo sapiens hypothetical protein LOC100131578 (LOC100131578), mRNA.					
Homo sapiens	RefSeq	NM_015696.2	ILMN_164820	GPX7	NM_015696.3	NM_015696.3		2882	142363488	NM_015696.3	GPX7	NP_056511.2	ILMN_1726030	0004200543	S	809	GAGAGCTCTTGACCAGTGAATCACCAGCCGATACGAACGTCTTGCCAACA	1	+	52846892-52846941	1p32.3d	Homo sapiens glutathione peroxidase 7 (GPX7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	NPGPx; FLJ14777; GPX6; CL683	NPGPx; FLJ14777; GPX6; CL683
Homo sapiens	RefSeq	NM_173804.3	ILMN_3831	TMEM86B	NM_173804.3	NM_173804.3		255043	31560865	NM_173804.3	TMEM86B	NP_776165.2	ILMN_2049417	0003290161	S	1542	TTCCCTGTGGGTGTGGAACCGTAGATGTTGCTGTTACCGTAGGAGAGGCC	19	-	60429973-60430022	19q13.42b	Homo sapiens transmembrane protein 86B (TMEM86B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC30208	MGC30208
Homo sapiens	RefSeq	XM_001716834.1	ILMN_346428	LOC642131	XM_001716834.1	XM_001716834.1		642131	169208447	XM_001716834.1	LOC642131	XP_001716886.1	ILMN_3212395	0002360739	A	186	CTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCT	15	-	19974420-19974469	15q11.2b	PREDICTED: Homo sapiens similar to hCG1812074 (LOC642131), mRNA.					
Homo sapiens	RefSeq	XM_001716834.1	ILMN_346428	LOC642131	XM_001716834.1	XM_001716834.1		642131	169208447	XM_001716834.1	LOC642131	XP_001716886.1	ILMN_3233110	0006400110	I	733	CGGGTCATGCACACGTATGATTCCAGGTCATGCGGGCTCTACTGCAGGAC	15	-	19972869-19972918	15q11.2b	PREDICTED: Homo sapiens similar to hCG1812074 (LOC642131), mRNA.					
Homo sapiens	RefSeq	NM_000576.2	ILMN_27277	IL1B	NM_000576.2	NM_000576.2		3553	27894305	NM_000576.2	IL1B	NP_000567.1	ILMN_1775501	0000840685	S	1133	CTCACCTCTCCTACTCACTTAAAGCCCGCCTGACAGAAACCACGGCCACA	2	-	113587652-113587701	2q13d	Homo sapiens interleukin 1, beta (IL1B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1919436] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3493774] [evidence TAS]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 10748004] [evidence IDA]; A rise in body temperature above the normal, often as a response to infection [goid 1660] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to amino acids within a protein [goid 1934] [pmid 10748004] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9218611] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10748004] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 1919436] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9218611] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10786823] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2989698] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 3493774] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 10748004] [evidence IDA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chemokines [goid 45080] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [pmid 8383325] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [pmid 8383325] [evidence IDA]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [pmid 10748004] [evidence IDA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10786823] [evidence TAS]; Interacting selectively with the interleukin-1 receptor [goid 5149] [pmid 1919436] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9062193] [evidence IPI]	IL1F2; IL1-BETA; IL-1	IL1F2; IL1-BETA; IL-1
Homo sapiens	RefSeq	NM_153238.1	ILMN_163905	TMEM148	XR_017979.1	XR_017979.1		197196	113426505	XR_017979.1	TMEM148		ILMN_1668333	0001030575	S	1590	ATGCCTGCGCACAGTAGGCACGGAAGTATTTGTGGAAGGAAGAAATGGAG				16q24.1b	PREDICTED: Homo sapiens transmembrane protein 148 (TMEM148), misc RNA.					
Homo sapiens	RefSeq	NM_003984.1	ILMN_656	SLC13A2	NM_003984.2	NM_003984.2		9058	141803028	NM_003984.2	SLC13A2	NP_003975.1	ILMN_1792744	0005870291	S	1752	TCTTCAGCCTGCACTCTTTCCCCTCCTGGGCACAGTCCAACACCACAGCC	17	+	23848320-23848369	17q11.2a	Homo sapiens solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 (SLC13A2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8967342] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8967342] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In low affinity transport the transporter is able to bind the solute only if it is present at very high concentrations [goid 15361] [pmid 8967342] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NADC1; NaDC-1	NADC1; NaDC-1
Homo sapiens	RefSeq	XM_114618.6	ILMN_36974	R3HCC1	XM_939319.2	XM_939319.2		203069	113420338	XM_939319.2	R3HCC1	XP_944412.2	ILMN_1735474	0006940202	A	1496	CAACACCATAAGCCTTCACAGACGCCAGAGCAGCCCCGCACCACCCTCGA				8p21.3a	PREDICTED: Homo sapiens R3H domain and coiled-coil containing 1 (R3HCC1), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor) [goid 16765] [evidence IEA]		
Homo sapiens	RefSeq	NM_012468.3	ILMN_138203	TCL6	NM_012468.3	NM_012468.3		27004	21536339	NM_012468.3	TCL6	NP_036600.2	ILMN_1777614	0000620471	A	3254	GCAAGGCACAAGTCATACCTACATTCAAGGAGAGGGGACCATGCAAAGGA	14	+	95205648-95205697	14q32.13b	Homo sapiens T-cell leukemia/lymphoma 6 (TCL6), transcript variant TCL6a1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TNG2; TNG1; TCL6e1	TNG2; TNG1; TCL6e1
Homo sapiens	RefSeq	NM_004031.1	ILMN_5194	IRF7	NM_004031.2	NM_004031.2		3665	98985818	NM_004031.2	IRF7	NP_004022.2	ILMN_1674646	0006380164	I	400	ACCCTCTCCAGATGCCAGTCCCCGAGCGCCCTGCAGCCGGCCCTGACTCT	11	-	615279-615318:615319-615328	11p15.5d	Homo sapiens interferon regulatory factor 7 (IRF7), transcript variant d, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9786932] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9786932] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9315633] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 9786932] [evidence TAS]; An immune response mediated by immunoglobulins, whether cell-bound or in solution [goid 16064] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any type I interferon. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families [goid 45351] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 9315633] [evidence TAS]	IRF-7H; IRF7A	IRF7A; IRF-7H
Homo sapiens	Unigene	Hs.559820	ILMN_113871	HS.559820	Hs.559820		Hs.559820		1550064	AA057423			ILMN_1857439	0001820537	S	551	CAGCTCTGGTTTTACCATGCATCTAGTAGACACCTAGACATCAGGACTCC	10	+	89610543-89610547:89610550-89610556:89610559-89610565:89610568-89610583:89610586-89610595:89610611-89610615		zf57b09.s1 Soares retina N2b4HR Homo sapiens cDNA clone IMAGE:381017 3, mRNA sequence					
Homo sapiens	RefSeq	NM_080618.2	ILMN_18321	CTCFL	NM_080618.2	NM_080618.2		140690	29570784	NM_080618.2	CTCFL	NP_542185.2	ILMN_1745395	0000620041	S	3007	GCCAGTTGACAAGATTTTTCCACCCTCGAGCAGCGTGAGAGATGCCTCTT	20	-	56072623-56072672	20q13.31a	Homo sapiens CCCTC-binding factor (zinc finger protein)-like (CTCFL), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	BORIS; MGC163358; dJ579F20.2; CTCF-T	BORIS; MGC163358; dJ579F20.2; CTCF-T
Homo sapiens	RefSeq	XM_117152.2	ILMN_33027	LOC199897	XM_117152.3	XM_117152.3		199897	113408726	XM_117152.3	LOC199897	XP_117152.3	ILMN_1675916	0000430482	S	61	GGGACACTTGGGGTCCAGCTTAGTGGCATTGAGCAGCAGTGGGAAGAGGC	1	-	63255755-63255804	1p31.3c	PREDICTED: Homo sapiens hypothetical LOC199897 (LOC199897), mRNA.					
Homo sapiens	RefSeq	NM_022136.3	ILMN_7778	SAMSN1	NM_022136.3	NM_022136.3		64092	48762708	NM_022136.3	SAMSN1	NP_071419.3	ILMN_2171289	0004390079	S	1647	TGGGAAAGTGTGAGTTAATATTGGACACATTTTATCCTGATCCACAGTGG	21	-	15857740-15857789	21q11.2d	Homo sapiens SAM domain, SH3 domain and nuclear localization signals 1 (SAMSN1), mRNA.			Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [pmid 15381729] [evidence IDA]	NASH1; HACS1; SASH2; SH3D6B	NASH1; HACS1; SASH2; SH3D6B
Homo sapiens	RefSeq	NM_022136.3	ILMN_7778	SAMSN1	NM_022136.3	NM_022136.3		64092	48762708	NM_022136.3	SAMSN1	NP_071419.3	ILMN_1684887	0001410181	S	1068	CACAGTTAGATGACTGCCCAAGGGACTCTGGTTGCTATATCTCATCAGGA	21	-	15858319-15858368	21q11.2d	Homo sapiens SAM domain, SH3 domain and nuclear localization signals 1 (SAMSN1), mRNA.			Interacting selectively with a phosphorylated tyrosine residue within a protein [goid 1784] [pmid 15381729] [evidence IDA]	NASH1; HACS1; SASH2; SH3D6B	NASH1; HACS1; SASH2; SH3D6B
Homo sapiens	RefSeq	XM_001719237.1	ILMN_345687	LOC730200	XM_001719237.1	XM_001719237.1		730200	169164041	XM_001719237.1	LOC730200	XP_001719289.1	ILMN_3226467	0005700750	A	657	GGGGGACGCATGGAGGATACCTCTCCCTTGTCACTATTTGTCAGTGGGAC				2p14b	PREDICTED: Homo sapiens hypothetical LOC730200 (LOC730200), mRNA.					
Homo sapiens	RefSeq	XM_001719237.1	ILMN_345687	LOC730200	XM_001719237.1	XM_001719237.1		730200	169164041	XM_001719237.1	LOC730200	XP_001719289.1	ILMN_3303072	0006770709	M	323	GCGGCTTTGGGCCGATGCAAGCTGCAAAATGGCGAGTCTTCTAAGGTGCC				2p14b	PREDICTED: Homo sapiens hypothetical LOC730200 (LOC730200), mRNA.					
Homo sapiens	RefSeq	NM_001695.3	ILMN_181099	ATP6V1C1	NM_001695.4	NM_001695.4		528	148536833	NM_001695.4	ATP6V1C1	NP_001686.1	ILMN_1659801	0002480241	A	5423	GAGTAAAGCCATGGAAGCCATGAACAGTAAGAGACTGCCGCCTGGCATGG	8	+	104085004-104085053	8q22.3c	Homo sapiens ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 (ATP6V1C1), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [pmid 8250920] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 8250920] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8250920] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16415858] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [pmid 8250920] [evidence TAS]	VATC; FLJ20057; ATP6D; Vma5; ATP6C	VATC; FLJ20057; ATP6D; Vma5; ATP6C
Homo sapiens	RefSeq	NM_001695.3	ILMN_181099	ATP6V1C1	NM_001695.4	NM_001695.4		528	148536833	NM_001695.4	ATP6V1C1	NP_001686.1	ILMN_1663257	0005550750	I	286	CCTGTCAGCAAACATGGGAGAAATTGCATGCGGCAACTTCAAAGAACAAT	8	+	104053105-104053154	8q22.3c	Homo sapiens ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 (ATP6V1C1), mRNA.	A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [pmid 8250920] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 8250920] [evidence TAS]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8250920] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16415858] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [pmid 8250920] [evidence TAS]	VATC; FLJ20057; ATP6D; Vma5; ATP6C	VATC; FLJ20057; ATP6D; Vma5; ATP6C
Homo sapiens	RefSeq	NM_006295.1	ILMN_10395	VARS	NM_006295.2	NM_006295.2		7407	94538367	NM_006295.2	VARS	NP_006286.1	ILMN_1696601	0006980100	I	4148	AGCTCCAACAGACAGAAGCAGAGCTCAGGAAGGTGGATGAGGCCATCGCC	6	-	31853370-31853418:31854723-31854723	6p21.33a	Homo sapiens valyl-tRNA synthetase (VARS), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6438] [evidence IEA]; The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6438] [evidence IEA]; The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6438] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence NAS]; The process of coupling valine to valyl-tRNA, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6438] [evidence IEA]	Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val) [goid 4832] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val) [goid 4832] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val) [goid 4832] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-tRNA(Val) [goid 4832] [pmid 8428657] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	G7A; VARS2	G7A; VARS2
Homo sapiens	RefSeq	XM_941170.1	ILMN_34676	LOC401923	XM_941170.1	XM_941170.1		401923	89057546	XM_941170.1	LOC401923	XP_946263.1	ILMN_1721802	0001660747	A	35	CCTCTGCAATGGTTTGTTTTGGCTGCCCAGGAGGTGCGTCAAGTCGCTGC				19q13.32b	PREDICTED: Homo sapiens hypothetical LOC401923 (LOC401923), mRNA.					
Homo sapiens	RefSeq	XR_041403.1	ILMN_351441	C17ORF54	XR_041403.1	XR_041403.1		283982	169211497	XR_041403.1	C17orf54		ILMN_3307509	0001580241	A	167	CTTTGCAGACTCCAGCTGGAACCCCTGCTGCAAGCGATGGAGGAGCAACA				17q25.1a	PREDICTED: Homo sapiens misc_RNA (C17orf54), miscRNA.					
Homo sapiens	RefSeq	XM_930216.1	ILMN_3901	ANAPC11	NM_001002244.1	NM_001002244.1		51529	50409809	NM_001002244.1	ANAPC11	NP_001002244.1	ILMN_1726281	0004230544	I	323	CCTGGGAGGCAGGGCCCATCCACAGGTGCCCATCAACACAGCTTCCCCAA	17	+	77450471-77450520	17q25.3g	Homo sapiens anaphase promoting complex subunit 11 (ANAPC11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [pmid 11739784] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 11739784] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 11739784] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11739784] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Apc11p; HSPC214; MGC882; APC11	
Homo sapiens	RefSeq	NM_001002244.1	ILMN_3901	ANAPC11	NM_001002244.1	NM_001002244.1		51529	50409809	NM_001002244.1	ANAPC11	NP_001002244.1	ILMN_1753773	0004540162	I	436	CCCCTCCTGCCCTTGATCAAGAGACCAGTTCACTACTCAGATGCACGTCT	17	+	77450584-77450633	17q25.3g	Homo sapiens anaphase promoting complex subunit 11 (ANAPC11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [pmid 11739784] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 11739784] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 11739784] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11739784] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Apc11p; HSPC214; MGC882; APC11	Apc11p; HSPC214; MGC882; APC11
Homo sapiens	RefSeq	NM_013276.2	ILMN_22706	SHPK	NM_013276.2	NM_013276.2		23729	74315355	NM_013276.2	SHPK	NP_037408.2	ILMN_2216918	0005310070	S	3420	CACGGTGTCACTTTCCATGGGTTCAGTTATCTGCGGTCAACCACGGTCTG	17	-	3511924-3511973	17p13.3a	Homo sapiens sedoheptulokinase (SHPK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 10673275] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + sedoheptulose = ADP + sedoheptulose 7-phosphate [goid 50277] [evidence IEA]	CARKL; FLJ32478; SHK	CARKL; FLJ32478; SHK
Homo sapiens	RefSeq	NM_000660.3	ILMN_29072	TGFB1	NM_000660.3	NM_000660.3		7040	63025221	NM_000660.3	TGFB1	NP_000651.3	ILMN_2129668	0005420307	S	2163	AAAGATGGAGAGAGGACTGCGGATCTCTGTGTCATTGGGCGCCTGCCTGG	19	-	46528624-46528673	19q13.2c	Homo sapiens transforming growth factor, beta 1 (TGFB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11100470] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9865696] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9934696] [evidence EXP]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence ISS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18040277] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18040277] [evidence IDA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 9934696] [evidence EXP]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 3457014] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 3457014] [evidence EXP]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence ISS]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [pmid 14679171] [evidence TAS]; The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared during or following an inflammatory response [goid 2248] [pmid 9639571] [evidence TAS]; Tolerance induction directed at self antigens [goid 2513] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [pmid 10513816] [evidence IDA]; The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 10513816] [evidence IDA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 15334054] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 14555988] [evidence IDA];  [goid 7184] [pmid 15334054] [evidence IDA]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [pmid 18080134] [evidence IEP]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence ISS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISS]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence ISS]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15702480] [evidence IDA]; Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [pmid 15334054] [evidence IDA]; Any process, either active or passive, by which a virus avoids or tolerates the effects of its host organism's defense(s). Host defenses may be induced by the presence of the virus or may be preformed (e.g. physical barriers). The host is defined as the larger of the organisms involved in a symbiotic interaction [goid 19049] [pmid 15334054] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 15334054] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [pmid 17401695] [evidence IEP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; Any cell cycle checkpoint that blocks entry into S phase [goid 31575] [pmid 15334054] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-17 production [goid 32740] [pmid 18453574] [evidence IDA]; The expansion of a mononuclear cell population by cell division. A mononuclear cell is a leukocyte with a single non-segmented nucleus in the mature form [goid 32943] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals [goid 32967] [pmid 9639571] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of removal of phosphate groups from a protein [goid 35307] [pmid 14555988] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IEA]; Any process that modulates the frequency, rate or extent of movement of proteins from the cytoplasm to the nucleus [goid 42306] [evidence ISS]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IEA]; The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 43029] [evidence IEA]; The formation of bone involved in the continuous turnover of bone matrix and mineral [goid 43932] [pmid 17401695] [evidence IEP]; The process by which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types [goid 45066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [pmid 14555988] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgA isotypes [goid 48298] [pmid 14988498] [evidence IDA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [pmid 16943770] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 51101] [evidence ISS]	Interacting selectively with a type II transforming growth factor beta receptor [goid 5114] [pmid 11157754] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISS]	CED; TGFB; DPD1	CED; TGFB; DPD1
Homo sapiens	RefSeq	XM_001715643.1	ILMN_338636	LOC100133812	XM_001715643.1	XM_001715643.1		100133812	169164899	XM_001715643.1	LOC100133812	XP_001715695.1	ILMN_3238640	0004120209	S	155	CAGTAGTTTTGTGTGTTGGCTGCTCCACTGTCCTCCACTTGCCTACAGGA					PREDICTED: Homo sapiens similar to metallopanstimulin (LOC100133812), mRNA.					
Homo sapiens	Unigene	Hs.435758	ILMN_91516	HS.435758	Hs.435758		Hs.435758		9148440	BE311826			ILMN_1849041	0005220553	S	390	CTGAAGTTGCCCGGAGGAAGTGCTGAACCCAGGAGTGGGGAAAGGAGCAT	1	+	47417980-47418029		601142925F1 NIH_MGC_14 Homo sapiens cDNA clone IMAGE:3506575 5, mRNA sequence					
Homo sapiens	RefSeq	NR_029613.1	ILMN_388201	MIR181C	NR_029613.1	NR_029613.1		406957	262206238	NR_029613.1	MIR181C		ILMN_3310201	0001410546	S	4	AAATTTGCCAAGGGTTTGGGGGAACATTCAACCTGTCGGTGAGTTTGGGC				19p13.12c	Homo sapiens microRNA 181c (MIR181C), microRNA.					
Homo sapiens	RefSeq	NM_014628.2	ILMN_9284	MAD2L1BP	NM_014628.2	NM_014628.2		9587	51243061	NM_014628.2	MAD2L1BP	NP_055443.1	ILMN_1694711	0006330538	A	916	GCGCTGAATCACCCATCTGGTTTGGAGCTAGAGTTGCTTCCTGGTGAGAG	6	+	43608325-43608374	6p21.1c	Homo sapiens MAD2L1 binding protein (MAD2L1BP), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10942595] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10942595] [evidence IDA]	Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022368] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]	RP1-261G23.6; CMT2; MGC11282; KIAA0110	RP1-261G23.6; CMT2; MGC11282; KIAA0110
Homo sapiens	RefSeq	NM_014628.2	ILMN_9284	MAD2L1BP	NM_014628.2	NM_014628.2		9587	51243061	NM_014628.2	MAD2L1BP	NP_055443.1	ILMN_1798454	0000460193	I	32	TCGTGATGGCGGCGCCGGAGGCGGAGGTTCTGTCCTCAGCCGCAGTCCCT	6	+	43603608-43603612:43603613-43603657	6p21.1c	Homo sapiens MAD2L1 binding protein (MAD2L1BP), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10942595] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10942595] [evidence IDA]	Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022368] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]	RP1-261G23.6; CMT2; MGC11282; KIAA0110	RP1-261G23.6; CMT2; MGC11282; KIAA0110
Homo sapiens	RefSeq	NM_032681.1	ILMN_14013	SPRYD5	NM_032681.1	NM_032681.1		84767	14249255	NM_032681.1	SPRYD5	NP_116070.1	ILMN_1753648	0004880204	S	1017	TCCCTGATATACACCATCCCCAATTGCTCCTTCTCACCTCCTCTCAGGCC	11	+	55415610-55415659	11q11c	Homo sapiens SPRY domain containing 5 (SPRYD5), mRNA.				MGC10977; TRIM51	MGC10977; TRIM51
Homo sapiens	RefSeq	XM_945808.1	ILMN_46373	LOC650120	XM_945808.1	XM_945808.1		650120	88954853	XM_945808.1	LOC650120	XP_950901.1	ILMN_1733126	0003360047	I	1941	CTCCTAATTATGTGTCCTTGTTCTTCTGTTTAACTCTAAAGTAACATTTT					PREDICTED: Homo sapiens hypothetical protein LOC650119, transcript variant 1 (LOC650120), mRNA.					
Homo sapiens	Unigene	Hs.129261	ILMN_76757	HS.129261	Hs.129261		Hs.129261		3178327	AA992213			ILMN_1855116	0000240563	S	22	GCTTTATTTAACGGACCATTTGCTCATCTGCTCTATTTTGCTCACAAGGC	18	+	21967308-21967357		ot29a07.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1618164 3, mRNA sequence					
Homo sapiens	RefSeq	XM_939939.1	ILMN_38410	LOC650851	XM_939939.1	XM_939939.1		650851	89042527	XM_939939.1	LOC650851	XP_945032.1	ILMN_1764084	0004830341	S	169	TGTCCCTGGGCTGCTCTCTCACCCGAGGGTGGATCTGGTGGACAGAAGAA					PREDICTED: Homo sapiens hypothetical protein LOC650851 (LOC650851), mRNA.					
Homo sapiens	Unigene	Hs.527174	ILMN_100871	HS.527174	Hs.527174		Hs.527174		38149277	CF887416			ILMN_1835958	0003870368	S	201	GCATGGTAGTTGAGGAGTGGTATGGGAACCAATTTGTGGTTTGGGGTCCA	5	-	57784975-57785024		UI-CF-FN0-afv-p-23-18-UI.r18 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-afv-p-23-18-UI 5, mRNA sequence					
Homo sapiens	RefSeq	XM_938350.1	ILMN_183867	LOC728637	XM_001130142.1	XM_001130142.1		728637	113417217	XM_001130142.1	LOC728637	XP_001130142.1	ILMN_1692466	0005490504	A	673	CTGGGAGTGTCCCAACTTGGAAGAACACATGCAGTGGAAGAATTCTACTC				5q31.1b	PREDICTED: Homo sapiens similar to mCG13783 (LOC728637), mRNA.					
Homo sapiens	RefSeq	NM_180703.2	ILMN_371859	SNRNP35	NM_180703.2	NM_180703.2		11066	212549559	NM_180703.2	SNRNP35	NP_851034.1	ILMN_3229052	0006100681	A	1249	GGGATCGAGACCATGACAGGGGCCGGGAGAAGAGATGGCAAGAAAGAGAG	12	+	123950683-123950732	12q24.31d	Homo sapiens small nuclear ribonucleoprotein 35kDa (U11/U12) (SNRNP35), transcript variant 4, mRNA.					
Homo sapiens	Unigene	Hs.524108	ILMN_100420	HS.524108	Hs.524108		Hs.524108		3149757	AA974577			ILMN_1857833	0001580193	S	269	GCAGCCAGCATGGGTTCCTGCAAACAAGGGCAACAAGCAGCTCAAAGCAA	11	+	122785610-122785638:122785735-122785755		op28g08.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1578206 3, mRNA sequence					
Homo sapiens	RefSeq	NM_173486.1	ILMN_308358	C2ORF73	NM_001100396.1	NM_001100396.1		129852	154240727	NM_001100396.1	C2orf73	NP_001093866.1	ILMN_1797577	0002120669	S	1192	GAGGCCCTGTTAGACATGAGTGGACAGCTTTGGAATCAAACAAACTAGAG	2	+	54441489-54441538	2p16.2a	Homo sapiens chromosome 2 open reading frame 73 (C2orf73), mRNA.					
Homo sapiens	Unigene	Hs.121167	ILMN_75704	HS.121167	Hs.121167		Hs.121167		20809936	BC029602			ILMN_1900650	0006200445	S	1525	AGGCAAATTGCGTTTCCCGACACCCACCAAGAAAGGGAGGACTGGAGTTA	4	+	142349771-142349820		Homo sapiens cDNA clone IMAGE:5296510					
Homo sapiens	RefSeq	NM_004333.2	ILMN_31471	BRAF	NM_004333.3	NM_004333.3		673	90265828	NM_004333.3	BRAF	NP_004324.2	ILMN_1652472	0007210202	S	2069	GGACGAGGATACCTGTCTCCAGATCTCAGTAAGGTACGGAGTAACTGTCC	7	-	140086150-140086199	7q34d	Homo sapiens v-raf murine sarcoma viral oncogene homolog B1 (BRAF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 2284096] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9207797] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 10712923] [evidence EXP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9207797] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA];  [goid 5057] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	B-raf 1; MGC138284; BRAF1; MGC126806; RAFB1	B-raf 1; MGC138284; BRAF1; MGC126806; RAFB1
Homo sapiens	RefSeq	NM_032875.1	ILMN_11563	FBXL20	NM_032875.1	NM_032875.1		84961	14249619	NM_032875.1	FBXL20	NP_116264.2	ILMN_1754489	0004900240	S	2236	CCCCCCACACTCTTGCTCAGTCTGTCACCTGTTCAGTCTGCTTACTCACT	17	-	37416959-37417008	17q12c	Homo sapiens F-box and leucine-rich repeat protein 20 (FBXL20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fbl2; MGC15482; Fbl20; SCR	MGC15482; Fbl20; SCR; Fbl2
Homo sapiens	Unigene	Hs.405877	ILMN_89814	HS.405877	Hs.405877		Hs.405877		77799909	AK057443			ILMN_1875354	0002570369	S	1660	GACCCTGGAACTGTTCCAAACTGGAGGGGACCAAAGAGGCATGACAACTA	22	+	25240162-25240211		Homo sapiens cDNA FLJ32881 fis, clone TESTI2004153					
Homo sapiens	RefSeq	NM_001037666.1	ILMN_15555	LOC652968	NM_001037666.1	NM_001037666.1		652968	83415180	NM_001037666.1	LOC652968	NP_001032755.1	ILMN_2098418	0004860500	S	1103	CTGTTCTGCTGGGGACCCTCGTTCCGCTCTCTGTATGTAAGCTGCGTGCA	22	-	29011462-29011511	22q12.2b	Homo sapiens hypothetical protein LOC652968 (LOC652968), mRNA.					
Homo sapiens	RefSeq	XM_944366.1	ILMN_36208	LOC375295	XM_944366.2	XM_944366.2		375295	113414148	XM_944366.2	LOC375295	XP_949459.1	ILMN_1685943	0004560475	I	705	CATGTGTCTGCCTCTTCATGTTCCTTCCAGTCAGAAAGCTGCTCAGGAGT				2q31.1i	PREDICTED: Homo sapiens hypothetical gene supported by BC013438 (LOC375295), mRNA.					
Homo sapiens	RefSeq	NM_001619.3	ILMN_22739	ADRBK1	NM_001619.3	NM_001619.3		156	148539875	NM_001619.3	ADRBK1	NP_001610.2	ILMN_3307926	0003290113	S	3340	CTCCCGTCTACTCATTCCCCGGGGCGTTTCTTTGCCGATTTTTGAATGTG	11	+	66810501-66810550	11q13.1f	Homo sapiens adrenergic, beta, receptor kinase 1 (ADRBK1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1339451] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17986524] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IEA]; The process that stops, prevents or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity after prolonged stimulation with an agonist of the pathway [goid 2029] [evidence IEA]; Any process which decreases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine [goid 3108] [pmid 15051637] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [evidence ISS]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [pmid 17986524] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the regulated release of a catecholamine [goid 33605] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle contraction [goid 45988] [pmid 15051637] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [pmid 15051637] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor [goid 47696] [evidence IEA]	FLJ16718; BETA-ARK1; GRK2; BARK1	BETA-ARK1; GRK2; BARK1
Homo sapiens	RefSeq	NM_024726.3	ILMN_17212	IQCA1	NM_024726.3	NM_024726.3		79781	40255051	NM_024726.3	IQCA1	NP_079002.3	ILMN_2080684	0007320064	S	2818	GCCGCAAACCCGCTAACCACTGCATGTGCTGTTATGCCTTTCCCAGGCTG	2	-	237233114-237233163	2q37.2b-q37.3a	Homo sapiens IQ motif containing with AAA domain 1 (IQCA1), mRNA.				4930465P12Rik; FLJ22527	FLJ22527; 4930465P12Rik
Homo sapiens	RefSeq	NM_024726.3	ILMN_17212	IQCA1	NM_024726.3	NM_024726.3		79781	40255051	NM_024726.3	IQCA1	NP_079002.3	ILMN_1654598	0005050561	S	2693	TGAAGAACCATGCTTGAGTCTCTCTGGGATGGAGAGGACCCCAACTCGCC	2	-	237233239-237233288	2q37.2b-q37.3a	Homo sapiens IQ motif containing with AAA domain 1 (IQCA1), mRNA.				4930465P12Rik; FLJ22527	FLJ22527; 4930465P12Rik
Homo sapiens	Unigene	Hs.540642	ILMN_105269	HS.540642	Hs.540642		Hs.540642		31153594	CD369504			ILMN_1881262	0005860161	S	346	AAGACGCTCCCCGTGAAACTGCTCCATCCACACAAACAAGCCAGACGCGG	16	+	12653622-12653671		UI-H-FT1-bkd-g-08-0-UI.s1 NCI_CGAP_FT1 Homo sapiens cDNA clone UI-H-FT1-bkd-g-08-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038569.1	ILMN_335983	LOC729374	XR_038569.1	XR_038569.1		729374	169162248	XR_038569.1	LOC729374		ILMN_3221569	0004060113	A	544	GTAACTTAGAAAACCTAAGAGGGGCTTTCCAGCCCCAGCCCCGGCCCCTA				1q21.3a	PREDICTED: Homo sapiens misc_RNA (LOC729374), miscRNA.					
Homo sapiens	Unigene	Hs.539693	ILMN_104681	HS.539693	Hs.539693		Hs.539693		23288915	BU622700			ILMN_1829448	0001570521	S	317	GCACCCCTGGCAGTTGATAATGGAGGGCTGTTGGCAATGATTATGGAGGC	13	-	54633259-54633308		UI-H-FL1-bgc-h-06-0-UI.s1 NCI_CGAP_FL1 Homo sapiens cDNA clone UI-H-FL1-bgc-h-06-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_938014.1	ILMN_40502	LOC648934	XM_938014.1	XM_938014.1		648934	88999331	XM_938014.1	LOC648934	XP_943107.1	ILMN_1651408	0004920376	S	149	TCTCCAGACAGCAATGTGGCAAGAGGGTGGTGGGCCAAAACACTGTGGGC				6q14.1d	PREDICTED: Homo sapiens similar to citrate synthase precursor, isoform a (LOC648934), mRNA.					
Homo sapiens	RefSeq	XM_926230.1	ILMN_18774	ERC1	NM_178038.1	NM_178038.1		23085	38045893	NM_178038.1	ERC1	NP_829882.1	ILMN_1660547	0002690386	S	4192	CTGTTTGTTATTGCCCTTAGAGGGGCTCTGAGTATCTACTTGTGGGTGGC	12	+	1471080-1471129	12p13.33c	Homo sapiens ELKS/RAB6-interacting/CAST family member 1 (ERC1), transcript variant gamma, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15218148] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A protein serine/threonine kinase that phosphorylates IkappaB, thereby targeting this for proteasomal degradation and allowing the nuclear translocation of kB. Composed of alpha, beta and gamma subunits, the latter not having kinase activity but presumed to play a regulatory role [goid 8385] [pmid 15218148] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [pmid 12391317] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 15218148] [evidence NAS]; The process of introducing a phosphate group into an I-kappaB protein [goid 7252] [pmid 15218148] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 15218148] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [pmid 15218148] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 15218148] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12391317] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12923177] [evidence IPI]; Interacting selectively with a leucine zipper domain, a protein secondary structure exhibiting a periodic repetition of leucine residues at every seventh position over a distance covering eight helical turns [goid 43522] [pmid 15218148] [evidence NAS]	RAB6IP2; KIAA1081; Cast2; MGC12974; ELKS	
Homo sapiens	RefSeq	NM_178037.1	ILMN_18774	ERC1	NM_178038.1	NM_178038.1		23085	38045893	NM_178038.1	ERC1	NP_829882.1	ILMN_1716060	0007040193	A	3685	CCCCAGTAACAGATGCCCGTTGCTCTTGGGCTGGTTTCCCCTGAACACCT	12	+	1470573-1470622	12p13.33c	Homo sapiens ELKS/RAB6-interacting/CAST family member 1 (ERC1), transcript variant gamma, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15218148] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; A protein serine/threonine kinase that phosphorylates IkappaB, thereby targeting this for proteasomal degradation and allowing the nuclear translocation of kB. Composed of alpha, beta and gamma subunits, the latter not having kinase activity but presumed to play a regulatory role [goid 8385] [pmid 15218148] [evidence IDA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [pmid 12391317] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 15218148] [evidence NAS]; The process of introducing a phosphate group into an I-kappaB protein [goid 7252] [pmid 15218148] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 15218148] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [pmid 15218148] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of activity of the transcription factor NF-kappaB [goid 51092] [pmid 15218148] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12391317] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12923177] [evidence IPI]; Interacting selectively with a leucine zipper domain, a protein secondary structure exhibiting a periodic repetition of leucine residues at every seventh position over a distance covering eight helical turns [goid 43522] [pmid 15218148] [evidence NAS]	RAB6IP2; KIAA1081; Cast2; MGC12974; ELKS	RAB6IP2; KIAA1081; Cast2; MGC12974; ELKS; ERC1
Homo sapiens	RefSeq	XM_001126148.2	ILMN_164680	LOC727977	XM_001126148.2	XM_001126148.2		727977	169168729	XM_001126148.2	LOC727977	XP_001126148.2	ILMN_3277387	0004560324	M	7	GCAATTGTCTTTCTGAATGACTTTTTGCCGGGCGCCATCTTTGACGCTGG				6q12c	PREDICTED: Homo sapiens hypothetical LOC727977 (LOC727977), mRNA.					
Homo sapiens	RefSeq	NM_020963.1	ILMN_3835	MOV10	NM_020963.2	NM_020963.2		4343	141803269	NM_020963.2	MOV10	NP_066014.1	ILMN_1725700	0006580484	S	3073	AGCTCTGAAGACACAGCACCCAGCCTTCTCGCACCAGCCAAGCCTTAACT	1	+	113044645-113044652:113044653-113044694	1p13.2c	Homo sapiens Mov10, Moloney leukemia virus 10, homolog (mouse) (MOV10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ32791; DKFZp667O1423; gb110; KIAA1631	DKFZp667O1423; FLJ32791; gb110; KIAA1631
Homo sapiens	RefSeq	XM_943322.1	ILMN_34093	LOC648438	XM_943322.1	XM_943322.1		648438	88951522	XM_943322.1	LOC648438	XP_948415.1	ILMN_1700743	0000630209	S	543	GCGTGGATACTAAGGACCCCCTCTGTACACCAACGCCAGTCCAAAGGACA					PREDICTED: Homo sapiens hypothetical protein LOC648438 (LOC648438), mRNA.					
Homo sapiens	RefSeq	NM_005089.1	ILMN_13409	U2AF1L2	NM_005089.1	NM_005089.1		8233	4827045	NM_005089.1	U2AF1L2	NP_005080.1	ILMN_1773868	0005260692	S	1387	AGCCAAAGTTCCTCTAGGTCCCGAAGTCGTGGCAGGAGGAGGTCGGGTAA	X	+	15751200-15751249	Xp22.2	Homo sapiens U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 (U2AF1L2), mRNA.				U2AF1RS2; U2AF1-RS2	U2AF1RS2; U2AF1-RS2
Homo sapiens	RefSeq	XM_941494.1	ILMN_45290	LOC652152	XM_941494.1	XM_941494.1		652152	89037921	XM_941494.1	LOC652152	XP_946587.1	ILMN_1791445	0004890639	S	7	CCTCACCATGGACAGGACCTAGAGCTAATCTTCCTGGTGGCAGCAGCTAC					PREDICTED: Homo sapiens similar to Ig heavy chain V-I region V35 precursor (LOC652152), mRNA.					
Homo sapiens	RefSeq	NM_152906.2	ILMN_13683	C22ORF25	NM_152906.3	NM_152906.3		128989	141803272	NM_152906.3	C22orf25	NP_690870.2	ILMN_1789405	0000630446	S	2053	GAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCGTGT	22	+	18433229-18433278	22q11.21c-q11.21d	Homo sapiens chromosome 22 open reading frame 25 (C22orf25), mRNA.				DKFZp761P1121	DKFZp761P1121
Homo sapiens	RefSeq	NM_002530.2	ILMN_21385	NTRK3	NM_002530.2	NM_002530.2		4916	59889559	NM_002530.2	NTRK3	NP_002521.2	ILMN_1734893	0003850402	A	1677	GACTCGCATCCCTGTCATTGAGAACCCCCAGTACTTCCGTCAGGGACACA	15	-	88576108-88576157	15q25.3d	Homo sapiens neurotrophic tyrosine kinase, receptor, type 3 (NTRK3), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7806211] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 7806211] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with neurotrophin, any of a family of growth factors that block apoptosis in neurons and thus promote nerve growth [goid 43121] [pmid 7806211] [evidence TAS]	TRKC; gp145(trkC)	TRKC; gp145(trkC)
Homo sapiens	RefSeq	NM_001035267.1	ILMN_5154	RPL41	NM_001035267.1	NM_001035267.1		6171	78217383	NM_001035267.1	RPL41	NP_001030344.1	ILMN_2331890	0002680484	A	259	AGGCAGAGGTCCAAGTAAACCGCTAGCTTGTTGCACCGTGGAGGCCACAG	12	+	54797558-54797575:54797576-54797607	12q13.2c	Homo sapiens ribosomal protein L41 (RPL41), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 1326959] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1326959] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 1326959] [evidence TAS]		
Homo sapiens	RefSeq	NM_021104.1	ILMN_5154	RPL41	NM_001035267.1	NM_001035267.1		6171	78217383	NM_001035267.1	RPL41	NP_001030344.1	ILMN_1710001	0001240523	S	1	ACCCGGCGCTCCATTAAATAGCCGTAGACGGAACTTCGCCTTTCTCTCGG	12	+	54796641-54796690	12q13.2c	Homo sapiens ribosomal protein L41 (RPL41), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 1326959] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1326959] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 1326959] [evidence TAS]		
Homo sapiens	RefSeq	NM_005749.2	ILMN_13735	TOB1	NM_005749.2	NM_005749.2		10140	22035666	NM_005749.2	TOB1	NP_005740.1	ILMN_1672004	0004390300	S	892	CCAATGGAATGTTCCCAGGTGACAGCCCCCTTAACCTCAGTCCTCTCCAG	17	-	48940472-48940521	17q21.33b	Homo sapiens transducer of ERBB2, 1 (TOB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	 [goid 7184] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8632892] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of BMP signaling pathway activity [goid 30514] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8632892] [evidence TAS]; Interacting selectively with a SMAD signaling protein [goid 46332] [evidence IEA]	MGC104792; TROB; APRO6; TROB1; PIG49; TOB; MGC34446	MGC104792; TROB; APRO6; TROB1; PIG49; TOB; MGC34446
Homo sapiens	RefSeq	NM_173179.2	ILMN_14293	SLC35C2	NM_173179.2	NM_173179.2		51006	34335288	NM_173179.2	SLC35C2	NP_775271.1	ILMN_1776542	0007160138	I	191	ATGGCTACGAGAAGCACAGTCTCTGCCTGAGGCTCCAGAGCGGCCCTTTT	20	-	44987412-44987461	20q13.12c	Homo sapiens solute carrier family 35, member C2 (SLC35C2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		FLJ37039; BA394O2.1; OVCOV1; MGC39183; CGI-15; C20orf5; MGC32079; MGC20633	FLJ37039; BA394O2.1; OVCOV1; MGC39183; CGI-15; C20orf5; MGC32079; MGC20633
Homo sapiens	RefSeq	NM_001042618.1	ILMN_182057	PARP2	NM_001042618.1	NM_001042618.1		10038	110825962	NM_001042618.1	PARP2	NP_001036083.1	ILMN_2354237	0007550113	A	1517	CAAGGTAAACATAGCACCAAGGGGCTGGGCAAGATGGCTCCCAGTTCTGC	14	+	19895455-19895504	14q11.2b	Homo sapiens poly (ADP-ribose) polymerase 2 (PARP2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 7260241] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	ADPRTL3; PARP-2; ADPRTL2; ADPRT2; pADPRT-2	ADPRTL3; PARP-2; ADPRTL2; ADPRT2; pADPRT-2
Homo sapiens	RefSeq	NM_004456.3	ILMN_25740	EZH2	NM_004456.3	NM_004456.3		2146	23510382	NM_004456.3	EZH2	NP_004447.2	ILMN_1652913	0000060639	I	472	TGCAGTTGCTTCAGTACCCATAATGTATTCTTGGTCTCCCCTACAGCAGA	7	-	148529733-148529782	7q36.1a	Homo sapiens enhancer of zeste homolog 2 (Drosophila) (EZH2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A multimeric protein complex that can methylate lysine-27 and lysine-9 residues of histone H3. In Drosophila the core subunits of the complex include ESC, E(Z), CAF1 (NURF-55) and SU(Z)12 [goid 35098] [pmid 15385962] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8921387] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8954776] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17560333] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16357870] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	EZH1; ENX-1; MGC9169; KMT6	EZH1; ENX-1; MGC9169; KMT6
Homo sapiens	RefSeq	NR_024333.1	ILMN_369941	LOC147727	NR_024333.1	NR_024333.1		147727	210147556	NR_024333.1	LOC147727		ILMN_3235597	0005340653	S	1625	ACACTGAAAAGTCGAGGCCAAAGGAATGGGCTCCAGACAGCCTCCTCCGG	19	-	10762874-10762923	19p13.2b	Homo sapiens hypothetical LOC147727 (LOC147727), non-coding RNA.					
Homo sapiens	RefSeq	XM_928992.1	ILMN_136922	LOC646029	XM_928992.1	XM_928992.1		646029	89034173	XM_928992.1	LOC646029	XP_934085.1	ILMN_1652436	0004900176	S	136	AAAAAAGAGAAAGACAAATTCCTTTACTGTTACTTCTTTCCCTGGCTTCT	11	+	76959821-76959870	11q14.1a	PREDICTED: Homo sapiens hypothetical protein LOC646029 (LOC646029), mRNA.					
Homo sapiens	RefSeq	NM_001959.2	ILMN_6380	EEF1B2	NM_001959.3	NM_001959.3		1933	83376127	NM_001959.3	EEF1B2	NP_001950.1	ILMN_1701930	0003780246	I	293	TCTTCGGGTCCTTTTTCCTCTCTTCAGCGTGGGGCGCCCACAATTTGCGC	2	+	206732855-206732904	2q33.3b	Homo sapiens eukaryotic translation elongation factor 1 beta 2 (EEF1B2), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10368288] [evidence EXP]; A multisubunit nucleotide exchange complex that binds GTP and aminoacyl-tRNAs, and catalyzes their codon-dependent placement at the A-site of the ribosome. In humans, the complex is composed of four subunits, alpha, beta, delta and gamma [goid 5853] [pmid 1886777] [evidence NAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 1886777] [evidence NAS]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [pmid 1886777] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]	EEF1B; EF1B; EEF1B1	EEF1B; EF1B; EEF1B1
Homo sapiens	RefSeq	NM_000788.1	ILMN_17142	DCK	NM_000788.1	NM_000788.1		1633	4503268	NM_000788.1	DCK	NP_000779.1	ILMN_2117240	0003800348	S	2207	ACCTTATGAACTACAGTGGAGCTACACTCATTGAAATGTAATTTCAGTTC	4	+	72115222-72115271	4q13.3b	Homo sapiens deoxycytidine kinase (DCK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2542307] [evidence EXP]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6220] [pmid 1996353] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + deoxycytidine = NDP + CMP [goid 4137] [pmid 1996353] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate [goid 19206] [pmid 2542307] [evidence EXP]	MGC117410; MGC138632	MGC117410; MGC138632
Homo sapiens	RefSeq	NM_000788.1	ILMN_17142	DCK	NM_000788.1	NM_000788.1		1633	4503268	NM_000788.1	DCK	NP_000779.1	ILMN_1651433	0005290703	S	1494	CCTGCCTCAGTCTGCTTTCTCTACTGTCTGGATTAATTAGGCAGCCTGCT	4	+	72114509-72114558	4q13.3b	Homo sapiens deoxycytidine kinase (DCK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2542307] [evidence EXP]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways involving a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6220] [pmid 1996353] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + deoxycytidine = NDP + CMP [goid 4137] [pmid 1996353] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate [goid 19206] [pmid 2542307] [evidence EXP]	MGC117410; MGC138632	MGC117410; MGC138632
Homo sapiens	RefSeq	NM_015368.3	ILMN_182792	PANX1	NM_015368.3	NM_015368.3		24145	39995063	NM_015368.3	PANX1	NP_056183.2	ILMN_1697817	0001940343	S	2282	GTGCCTTGAAGGGCAGCAGGCCCAAGTGCTGCTCTGACTGAAAACTGAGT	11	+	93554299-93554348	11q21b	Homo sapiens pannexin 1 (PANX1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Any specialized areas of the plasma membranes of adjacent cells where the membranes are 2-4 nm apart and penetrated by a connexon. This gap junction allows passage of small molecules and electric current. The variety in the properties of gap junctions is reflected in the number of connexins, the family of proteins which form the junction [goid 5921] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A cell extension characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusions [goid 32059] [pmid 17036048] [evidence IDA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [pmid 17036048] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [pmid 17036048] [evidence IDA]		MRS1; MGC21309; UNQ2529	MRS1; MGC21309; UNQ2529
Homo sapiens	RefSeq	NM_032143.2	ILMN_15119	ZRANB3	NM_032143.2	NM_032143.2		84083	62860045	NM_032143.2	ZRANB3	NP_115519.2	ILMN_2150161	0004860014	S	3265	GCCAGACAAGCTAAGGAAAGAAGCCAGGTGAGAAGACAATCTCTAGCATC	2	-	135965093-135965142	2q21.3a-q21.3b	Homo sapiens zinc finger, RAN-binding domain containing 3 (ZRANB3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC105033; MGC75012	MGC105033; MGC75012
Homo sapiens	RefSeq	NM_032143.2	ILMN_15119	ZRANB3	NM_032143.2	NM_032143.2		84083	62860045	NM_032143.2	ZRANB3	NP_115519.2	ILMN_1809857	0003870187	S	3168	GCAGGTGGATCACATCAAGCCAGTGTATGGGGGAGGAGGACAGTGTTCCC	2	-	135965190-135965239	2q21.3a-q21.3b	Homo sapiens zinc finger, RAN-binding domain containing 3 (ZRANB3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC105033; MGC75012	MGC105033; MGC75012
Homo sapiens	RefSeq	NM_006470.3	ILMN_30058	TRIM16	NM_006470.3	NM_006470.3		10626	48255912	NM_006470.3	TRIM16	NP_006461.3	ILMN_2339234	0001740193	A	1009	AGGACTGTTGCCAGGAGCACAGTGGCCACACCATAGTCTCCCTGGATGCA	17	-	15554422-15554471	17p12a	Homo sapiens tripartite motif-containing 16 (TRIM16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9817599] [evidence TAS]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EBBP	EBBP
Homo sapiens	RefSeq	NM_006470.3	ILMN_30058	TRIM16	NM_006470.3	NM_006470.3		10626	48255912	NM_006470.3	TRIM16	NP_006461.3	ILMN_1740042	0003800196	I	221	AGCAGGCACAGAGACACGTGGTCTTCAGCAGAGCCTATGGGGTTCAGATG	17	-	15555210-15555259	17p12a	Homo sapiens tripartite motif-containing 16 (TRIM16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9817599] [evidence TAS]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EBBP	EBBP
Homo sapiens	RefSeq	XM_938957.1	ILMN_30058	TRIM16	NM_006470.3	NM_006470.3		10626	48255912	NM_006470.3	TRIM16	NP_006461.3	ILMN_1661220	0002370241	A	999	TGCATCTGCCAGGACTGTTGCCAGGAGCACAGTGGCCACACCATAGTCTC	17	-	15554432-15554481	17p12a	Homo sapiens tripartite motif-containing 16 (TRIM16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9817599] [evidence TAS]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	EBBP	
Homo sapiens	RefSeq	XM_208658.6	ILMN_164164	LOC283398	XM_208658.7	XM_208658.7		283398	113423448	XM_208658.7	LOC283398	XP_208658.5	ILMN_1727116	0001050301	A	1434	AGAGGCCCAGGAAATACTCAACAGCAGACTCCCCATTACTTCAGCCGTTG	12	+	93467344-93467393	12q22c	PREDICTED: Homo sapiens similar to hCG1791842, transcript variant 1 (LOC283398), mRNA.					
Homo sapiens	Unigene	Hs.574305	ILMN_126486	HS.574305	Hs.574305		Hs.574305		27822143	BX090520			ILMN_1865268	0004060521	S	145	TTGTTAACCACAATCACCCTACTGTGCAATAGAACACCAGAGTTTACTCC	16	-	53506736-53506785		BX090520 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998J11128 ; IMAGE:126826, mRNA sequence					
Homo sapiens	RefSeq	NM_015656.1	ILMN_307843	KIF26A	NM_015656.1	NM_015656.1		26153	150170698	NM_015656.1	KIF26A	NP_056471.1	ILMN_3242725	0002570746	S	6467	GTTTTTATGGTTTTCTAGGGAAGGTGTTCTGGGGGCCGGGCTCTCTCCAG	14	+	103716698-103716747	14q32.33b	Homo sapiens kinesin family member 26A (KIF26A), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ22753; DKFZP434N178; KIAA1236	FLJ22753; DKFZP434N178; KIAA1236
Homo sapiens	RefSeq	NM_002397.2	ILMN_19661	MEF2C	NM_002397.2	NM_002397.2		4208	19923214	NM_002397.2	MEF2C	NP_002388.2	ILMN_1742544	0004040162	S	3910	GTGTTTCTCATTGTAAAAGGCTGCCGCTGGGTGGCAGAAGCCAAGAGACC	5	-	88052034-88052083	5q14.3f	Homo sapiens myocyte enhancer factor 2C (MEF2C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [evidence IEA]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA]; The reorganization or renovation of existing blood vessels [goid 1974] [evidence IEA]; The process whereby a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage [goid 2062] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8455629] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8455629] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8575763] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 8455629] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	XM_939593.1	ILMN_46736	LOC648605	XM_939593.1	XM_939593.1		648605	89061196	XM_939593.1	LOC648605	XP_944686.1	ILMN_1737574	0002570400	A	210	GGAGTCATATATCCGGCCCTTCCACAGCCCAACTTCAAAAGCTTACTTCC					PREDICTED: Homo sapiens similar to Trimethyllysine dioxygenase, mitochondrial precursor (Epsilon-trimethyllysine 2-oxoglutarate dioxygenase) (TML-alpha-ketoglutarate dioxygenase) (TML hydroxylase) (TML dioxygenase) (TMLD), transcript variant 1 (LOC648605), mRNA.					
Homo sapiens	RefSeq	NM_001033556.1	ILMN_29525	PPM1B	NM_002706.4	NM_002706.4		5495	75758173	NM_002706.4	PPM1B	NP_002697.1	ILMN_1796085	0006520739	A	1316	AAATGCTCCCAAGGTCTCAGATGAAGCGGTGAAAAAAGATTCAGAGTTGG	2	+	44289894-44289943	2p21d	Homo sapiens protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform (PPM1B), transcript variant 1, mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9684878] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 9684878] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PPC2BETAX; MGC21657; PP2CB; PP2C-beta-X; PP2CBETA	PPC2BETAX; MGC21657; PP2CB; PP2C-beta-X; PP2CBETA
Homo sapiens	RefSeq	NM_003177.3	ILMN_8126	SYK	NM_003177.3	NM_003177.3		6850	34147655	NM_003177.3	SYK	NP_003168.2	ILMN_2059549	0000110685	S	2241	CCCGGGAGAAAAGACGGATGGCAGGATCCAAGGGGCTAGCTGGATTTGTT	9	+	92697889-92697938	9q22.2b	Homo sapiens spleen tyrosine kinase (SYK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9280292] [evidence EXP]; A membrane-bound antigen receptor complex consisting in its basic form of an antigen-binding subunit (the membrane immunoglobulin or mIg), comprised of two identical heavy chains and two identical light chains held together by disulfide bonds, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins [goid 19815] [evidence IEA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 8176201] [evidence IDA]	The regulated release of serotonin by a cell or group of cells. Serotonin (5-hydroxytryptamine, or 5-HT) is a monoamine synthesised in serotonergic neurons in the central nervous system, enterochromaffin cells in the gastrointestinal tract and some immune system cells [goid 1820] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 8163536] [evidence TAS]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 12885943] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 12885943] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10963601] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 7477352] [evidence TAS]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [pmid 12885943] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mast cell degranulation [goid 43306] [evidence IEA]; The process by which successful recombination of a T cell receptor beta chain into a translatable protein coding sequence leads to rescue from apoptosis and subsequent proliferation of an immature T cell [goid 43366] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-3 [goid 45401] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of granulocyte macrophage colony-stimulating factor [goid 45425] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of B cell differentiation [goid 45579] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation [goid 45588] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation [goid 46638] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of alpha-beta T cell proliferation [goid 46641] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell [goid 50853] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA];  [goid 4716] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 12885943] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9280292] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8627166] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12885943] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_936008.1	ILMN_46705	LOC641959	XM_936008.1	XM_936008.1		641959	89026860	XM_936008.1	LOC641959	XP_941101.1	ILMN_1801867	0006350725	S	1	ATGAAAAGTTGCGGGGGCCCTACTGCCCCGGGTGTGTCGCTCCTTCCCAA					PREDICTED: Homo sapiens hypothetical protein LOC641959 (LOC641959), mRNA.					
Homo sapiens	RefSeq	NM_015045.1	ILMN_16721	KIAA0261	NM_015045.1	NM_015045.1		23063	42734324	NM_015045.1	KIAA0261	NP_055860.1	ILMN_1693668	0003440672	S	5392	GGGCTCTTGTATCAGTGCCAGCTGTAATGTTTTTAAATGCAGTGGCTGCC	10	-	88185853-88185902	10q23.2a	Homo sapiens KIAA0261 (KIAA0261), mRNA.				WAPL; FOE	WAPL; FOE
Homo sapiens	RefSeq	NM_001800.3	ILMN_28866	CDKN2D	NM_001800.3	NM_001800.3		1032	39995074	NM_001800.3	CDKN2D	NP_001791.1	ILMN_1740597	0001090333	I	204	CCCCGGGAGGGCTGTTCGGGCCAGCGCCCGCCGGCTGCTCCGCGCTGACA	19	-	10679378-10679427	19p13.2b	Homo sapiens cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) (CDKN2D), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15750620] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8741839] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15750620] [evidence IDA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 8741839] [evidence IDA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 10208428] [evidence IDA]; Synthesis of DNA that proceeds from the broken 3' single-strand DNA end uses the homologous intact duplex as the template [goid 731] [pmid 15750620] [evidence IMP]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 15750620] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10208428] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 15750620] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 10208428] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 16322758] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin D stimulus [goid 33280] [pmid 16322758] [evidence IMP]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 15750620] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Destruction of a cell by its own lysosomal contents. This type of programmed cell death is seen when entire tissues, or parts thereof, are committed to destruction, and occurs by the formation of multiple acidic autophagic vacuoles within the doomed cells [goid 48102] [pmid 16322758] [evidence IMP]	Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 8741839] [evidence IDA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8741839] [evidence IPI]	p19-INK4D; INK4D; p19	p19-INK4D; INK4D; p19
Homo sapiens	RefSeq	XM_929032.1	ILMN_46463	LOC646071	XM_929032.2	XM_929032.2		646071	113425021	XM_929032.2	LOC646071	XP_934125.1	ILMN_1781270	0002100044	S	1316	GACTGTCGCCTTGAGAAGTGCAGTCATAGAGGGGTCTGCAACAACAGAAG	15	-	18511639-18511688	15q11.2a	PREDICTED: Homo sapiens similar to testicular Metalloprotease-like, Disintegrin-like, Cysteine-rich protein IVa (LOC646071), mRNA.					
Homo sapiens	RefSeq	XM_943936.1	ILMN_33269	LOC649823	XM_943936.1	XM_943936.1		649823	89038956	XM_943936.1	LOC649823	XP_949029.1	ILMN_1680936	0003830286	S	347	AGGCTGTCGGCCTCCTCCCCGCACCCTCCCTGCTGCGGTCGGTGATGGCA					PREDICTED: Homo sapiens hypothetical protein LOC649823 (LOC649823), mRNA.					
Homo sapiens	RefSeq	NM_001013840.1	ILMN_24822	C10ORF61	NM_001013840.1	NM_001013840.1		26123	62079296	NM_001013840.1	C10orf61	NP_001013862.1	ILMN_1768077	0006620056	A	2391	CCATCAGCCCTCAGGCACAGTTGGGCCAAGCAGAAAGAGAGAAACACTTC	10	-	97413441-97413490	10q23.33d	Homo sapiens chromosome 10 open reading frame 61 (C10orf61), transcript variant 1, mRNA.				DKFZp564D116; TECT3	DKFZp564D116; TECT3
Homo sapiens	RefSeq	NM_001013840.1	ILMN_24822	C10ORF61	NM_001013840.1	NM_001013840.1		26123	62079296	NM_001013840.1	C10orf61	NP_001013862.1	ILMN_1678652	0001010129	I	1135	CCAGGTTCCTGTAATACTTACCTCACAGGCTAATGCTCCTCTGTTGGCTG	10	-	97435331-97435380	10q23.33d	Homo sapiens chromosome 10 open reading frame 61 (C10orf61), transcript variant 1, mRNA.				DKFZp564D116; TECT3	DKFZp564D116; TECT3
Homo sapiens	RefSeq	XM_933193.1	ILMN_138421	LOC653674	XM_933193.1	XM_933193.1		653674	88943920	XM_933193.1	LOC653674	XP_938286.1	ILMN_1720364	0002340719	S	1	ATGCTCAGAAGCCGGGCAGGTTTTGGTCTCAAGCACGCAGCCTGTGCATT	1	+	237616441-237616490		PREDICTED: Homo sapiens similar to cholinergic receptor, muscarinic 3 (LOC653674), mRNA.					
Homo sapiens	RefSeq	XM_001732861.1	ILMN_350777	LOC731631	XM_001732861.1	XM_001732861.1		731631	169170384	XM_001732861.1	LOC731631	XP_001732913.1	ILMN_3305727	0004730646	M	38	CCAGGCCCGACTGCTGCCTCCCAACAACCTCTTTGGACTCAGCGCCTGCC	7	-	56441873-56441922	7p11.2b	PREDICTED: Homo sapiens hypothetical LOC731631 (LOC731631), mRNA.					
Homo sapiens	RefSeq	XM_001732861.1	ILMN_350777	LOC731631	XM_001732861.1	XM_001732861.1		731631	169170384	XM_001732861.1	LOC731631	XP_001732913.1	ILMN_3229113	0004480630	A	37	TCCAGGCCCGACTGCTGCCTCCCAACAACCTCTTTGGACTCAGCGCCTGC	7	-	56441874-56441923	7p11.2b	PREDICTED: Homo sapiens hypothetical LOC731631 (LOC731631), mRNA.					
Homo sapiens	RefSeq	XM_001720726.1	ILMN_351677	LOC100129936	XM_001720726.1	XM_001720726.1		100129936	169215552	XM_001720726.1	LOC100129936	XP_001720778.1	ILMN_3272374	0000290553	M	61	TTCATGGATGAAAACAAAAATCCAAGTGACGCTCCTTTGTTGAATCCATG	22	-	25402333-25402382	22q12.1a	PREDICTED: Homo sapiens hypothetical protein LOC100129936 (LOC100129936), mRNA.					
Homo sapiens	RefSeq	XM_001720726.1	ILMN_351677	LOC100129936	XM_001720726.1	XM_001720726.1		100129936	169215552	XM_001720726.1	LOC100129936	XP_001720778.1	ILMN_3195903	0005910707	A	1	TGTTTCCAGCGTGAATTGATTTTTAATAGCAAAATGGCATTTTACACAGA	22	-	25402393-25402442	22q12.1a	PREDICTED: Homo sapiens hypothetical protein LOC100129936 (LOC100129936), mRNA.					
Homo sapiens	RefSeq	NM_015322.3	ILMN_27350	FEM1B	NM_015322.3	NM_015322.3		10116	52851431	NM_015322.3	FEM1B	NP_056137.1	ILMN_1744239	0001690746	S	2175	CTGTGGTGCTGAGGTGAATGCCGTGGACAATGAGGGAAACAGTGCCCTTC	15	+	66370310-66370359	15q23a	Homo sapiens fem-1 homolog b (C. elegans) (FEM1B), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10623617] [evidence NAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 10542291] [evidence IMP]; Any process that modulates the frequency, rate or extent of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 51438] [pmid 15601820] [evidence IMP]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 15601820] [evidence IMP]; Interacting selectively with a death receptor [goid 5123] [pmid 10542291] [evidence IMP]; Interacting selectively with a death receptor [goid 5123] [pmid 10623617] [evidence NAS]	FIAA; DKFZp451E0710	FIAA; DKFZp451E0710
Homo sapiens	Unigene	Hs.543981	ILMN_107475	HS.543981	Hs.543981		Hs.543981		2324916	AA554377			ILMN_1847612	0001110189	S	16	CCTCTCAAGCCCAGACTCTGTAAGTGCCCACTCTACTTCTACCATGCCAG	5	+	102018228-102018277		nk37c05.s1 NCI_CGAP_GC2 Homo sapiens cDNA clone IMAGE:1015688 3, mRNA sequence					
Homo sapiens	RefSeq	XM_945050.1	ILMN_45210	LOC643624	XM_945050.2	XM_945050.2		643624	113422196	XM_945050.2	LOC643624	XP_950143.2	ILMN_1800221	0006590167	S	686	CTACAGTGCCCGCCTGCCGGTGCTGCCCGCTGTACATCTTTCAGGCCCAG					PREDICTED: Homo sapiens hypothetical LOC643624 (LOC643624), mRNA.					
Homo sapiens	RefSeq	NM_001104.1	ILMN_15544	ACTN3	NM_001104.1	NM_001104.1		89	4557240	NM_001104.1	ACTN3	NP_001095.1	ILMN_1665691	0000830348	S	2675	TGGACTACGTGGCCTTCTCCAGTGCCCTCTATGGGGAGAGCGACCTTTGA	11	+	66087191-66087240	11q13.1e	Homo sapiens actinin, alpha 3 (ACTN3), mRNA.	A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [pmid 1339456] [evidence TAS]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 16807302] [evidence IMP]; A temporary protrusion or retractile process of a cell, associated with flowing movements of the protoplasm, and serving for locomotion and feeding [goid 31143] [pmid 1629252] [evidence TAS]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 16807302] [evidence NAS]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [pmid 16807302] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 8104223] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11171996] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 1339456] [evidence TAS]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15841212] [evidence TAS]	MGC117002; MGC117005	MGC117002; MGC117005
Homo sapiens	RefSeq	NM_005808.2	ILMN_510	CTDSPL	NM_005808.2	NM_005808.2		10217	56549680	NM_005808.2	CTDSPL	NP_005799.2	ILMN_2392189	0001770170	A	4236	CCGGGTAGTGGAGATGCTGGTGTCTGGGTAGTCATGGATTTCTGCTGGAC	3	+	38000522-38000571	3p22.2b-p22.2a	Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like (CTDSPL), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	SCP3; C3orf8; PSR1; HYA22	SCP3; C3orf8; PSR1; HYA22
Homo sapiens	RefSeq	NM_002888.2	ILMN_10965	RARRES1	NM_002888.2	NM_002888.2		5918	46255040	NM_002888.2	RARRES1	NP_002879.2	ILMN_1677851	0002810475	I	764	AACTTGTGCCACAAGAGTTACAATCAAAGTGGTCTCCTTAGACTGAATTC	3	-	159905203-159905252	3q25.32b-q25.33a	Homo sapiens retinoic acid receptor responder (tazarotene induced) 1 (RARRES1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8601727] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9270552] [evidence TAS]		TIG1	TIG1
Homo sapiens	RefSeq	NM_002888.2	ILMN_10965	RARRES1	NM_002888.2	NM_002888.2		5918	46255040	NM_002888.2	RARRES1	NP_002879.2	ILMN_1743620	0001010132	A	388	GCACAGAGCGCTACAACCCAGAGTCTTTACTTCAGGAAGGTGAGGGACGT	3	-	159911389-159911416:159914280-159914301	3q25.32b-q25.33a	Homo sapiens retinoic acid receptor responder (tazarotene induced) 1 (RARRES1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8601727] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9270552] [evidence TAS]		TIG1	TIG1
Homo sapiens	RefSeq	NM_015028.1	ILMN_6482	TNIK	NM_015028.1	NM_015028.1		23043	55741806	NM_015028.1	TNIK	NP_055843.1	ILMN_1687442	0003800376	S	4013	CCGTGCGATCTGGAGGAAGTAGCCAAGTGTTTTTCATGACCCTCAACAGA	3	-	172264384-172264433	3q26.2c-q26.31a	Homo sapiens TRAF2 and NCK interacting kinase (TNIK), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10521462] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10521462] [evidence IDA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 99452967] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 99452967] [evidence NAS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10521462] [evidence IDA]; Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AD 2	AD 2
Homo sapiens	RefSeq	XM_940673.1	ILMN_44951	LOC651511	XM_940673.1	XM_940673.1		651511	89031847	XM_940673.1	LOC651511	XP_945766.1	ILMN_1654772	0006650343	S	1	ATGACTGAGGGGCCCGCAGTGGAGAGTGAGCGGGGCTTTCCCTGCCGGGC					PREDICTED: Homo sapiens similar to Nicotinamide phosphoribosyltransferase (NAmPRTase) (Nampt) (Pre-B cell enhancing factor) (Pre-B-cell colony-enhancing factor 1) (LOC651511), mRNA.					
Homo sapiens	RefSeq	NM_201222.1	ILMN_13385	MAGED2	NM_201222.1	NM_201222.1		10916	41350319	NM_201222.1	MAGED2	NP_957516.1	ILMN_1683576	0003420487	A	1784	ATCCAGGCGGGAGCAGAAGCTAAAGCCAAAGCCCAAGAGAGTGGCAGTGC	X	+	54841885-54841934	Xp11.21a	Homo sapiens melanoma antigen family D, 2 (MAGED2), transcript variant 3, mRNA.				MAGE-D2; MGC8386; MAGED; JCL-1; BCG1; 11B6; HCA10	MAGE-D2; MGC8386; MAGED; JCL-1; BCG1; 11B6; HCA10
Homo sapiens	RefSeq	NM_201222.1	ILMN_13385	MAGED2	NM_201222.1	NM_201222.1		10916	41350319	NM_201222.1	MAGED2	NP_957516.1	ILMN_1661417	0005490551	I	103	TGTATCTGAGAACGGAGTCGTTGGGGGTGGTGGAGGGGGTTGGAATTGGG	X	+	54835595-54835644	Xp11.21a	Homo sapiens melanoma antigen family D, 2 (MAGED2), transcript variant 3, mRNA.				MAGE-D2; MGC8386; MAGED; JCL-1; BCG1; 11B6; HCA10	MAGE-D2; MGC8386; MAGED; JCL-1; BCG1; 11B6; HCA10
Homo sapiens	RefSeq	NM_023920.2	ILMN_21919	TAS2R13	NM_023920.2	NM_023920.2		50838	67906810	NM_023920.2	TAS2R13	NP_076409.1	ILMN_1696528	0006290010	S	1134	GGCCTTTCTTTTGGTGGCAGCTAAGGTATGGGCTAAACGATGAGAAACTC	12	-	11060978-11060985:11060986-11061027	12p13.2b	Homo sapiens taste receptor, type 2, member 13 (TAS2R13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 10761934] [evidence TAS]	T2R13; TRB3	T2R13; TRB3
Homo sapiens	RefSeq	NM_001008572.1	ILMN_877	TTLL1	NM_001008572.1	NM_001008572.1		25809	56699470	NM_001008572.1	TTLL1	NP_001008572.1	ILMN_1737073	0000460497	I	351	CTCCTTGACCTTCCTGAATTTCGGTACAGATCCTGTTTAAATGAGTTTCC	22	-	41796141-41796190	22q13.2c	Homo sapiens tubulin tyrosine ligase-like family, member 1 (TTLL1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	C22orf7; HS323M22B	C22orf7; HS323M22B
Homo sapiens	RefSeq	NM_001024855.1	ILMN_1508	ZNF197	NM_001024855.1	NM_001024855.1		10168	68800229	NM_001024855.1	ZNF197	NP_001020026.1	ILMN_1790784	0004200053	I	2273	GCCAAAGGTTAGGGATGGTGGGAGGAAAAATGGGGAGAGGGTTGGATGGA	3	+	44664275-44664324	3p21.32a	Homo sapiens zinc finger protein 197 (ZNF197), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8353497] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P18; ZNF20; ZKSCAN9; D3S1363E; VHLaK; ZNF166	ZNF20; D3S1363E; VHLaK; P18; ZKSCAN9; ZNF166
Homo sapiens	RefSeq	NM_001024855.1	ILMN_1508	ZNF197	NM_001024855.1	NM_001024855.1		10168	68800229	NM_001024855.1	ZNF197	NP_001020026.1	ILMN_2270900	0006760025	I	2476	CCATGAGGGGAAAGTGGGTGAAGGGTGCTATCTTTGCAACTTCCTGTGAT	3	+	44664478-44664527	3p21.32a	Homo sapiens zinc finger protein 197 (ZNF197), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8353497] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P18; ZNF20; ZKSCAN9; D3S1363E; VHLaK; ZNF166	ZNF20; D3S1363E; VHLaK; P18; ZKSCAN9; ZNF166
Homo sapiens	RefSeq	XM_926824.1	ILMN_35701	LOC643505	XM_926824.1	XM_926824.1		643505	89025538	XM_926824.1	LOC643505	XP_931917.1	ILMN_1681728	0004780142	S	279	AAAAAATACAGGAGAGGCCAATGGAGAGGGGATGCATCAACGCCAGAACA	7	-	148518943-148518992	7q36.1b	PREDICTED: Homo sapiens similar to large subunit ribosomal protein L36a (LOC643505), mRNA.					
Homo sapiens	RefSeq	NM_001003895.1	ILMN_24806	CDY1	NM_004680.2	NM_004680.2		9085	25453479	NM_004680.2	CDY1	NP_004671.1	ILMN_1653471	0003450209	I	2139	CTTTTCCTTTATAAATGTCTAGTTCTTACCCAGTTAACAAAAGAAAACTT	Y	+	26180210-26180259	Yq11.23b	Homo sapiens chromodomain protein, Y-linked, 1 (CDY1), transcript variant 2, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9381176] [evidence TAS]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CDY; CDY1A	CDY; CDY1
Homo sapiens	RefSeq	XM_937514.1	ILMN_45356	LOC648470	XM_937514.1	XM_937514.1		648470	89035104	XM_937514.1	LOC648470	XP_942607.1	ILMN_1704554	0001450136	S	1510	AGTCCGGAGGCAACAGTCCAAATGCCCACCATAGAACGAGTGTCCATGAC					PREDICTED: Homo sapiens similar to Caspase-4 precursor (CASP-4) (ICH-2 protease) (TX protease) (ICE(rel)-II) (LOC648470), mRNA.					
Homo sapiens	RefSeq	XM_001720815.1	ILMN_336837	LOC100133609	XM_001720815.1	XM_001720815.1		100133609	169168048	XM_001720815.1	LOC100133609	XP_001720867.1	ILMN_3237270	0000780672	S	313	TCCTTGCTGGGCCTCCATTCGGTCAAGAGGAACTCAAAGGAGACAGTTGT					PREDICTED: Homo sapiens similar to membrane-associated ring finger (C3HC4) 3 (LOC100133609), mRNA.					
Homo sapiens	RefSeq	NM_203356.1	ILMN_162322	CTAGE5	NM_203356.1	NM_203356.1		4253	42740900	NM_203356.1	CTAGE5	NP_976231.1	ILMN_1690880	0007650504	A	4202	TGGAACACTTCACCCCAGCATTTCCCCAGGTGTTGTTTGGAACACTGATC	14	+	38890241-38890290	14q21.1b	Homo sapiens CTAGE family, member 5 (CTAGE5), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9356211] [evidence TAS]; Increases the activity of an enzyme [goid 8047] [pmid 9356211] [evidence TAS]	MEA6; cTAGE-5C; MGEA; MGEA6; cTAGE-5B; cTAGE-5D; MGEA11; CTAGE-5A	MEA6; cTAGE-5C; MGEA; MGEA6; cTAGE-5B; cTAGE-5D; CTAGE-5A; MGEA11
Homo sapiens	RefSeq	NM_139211.2	ILMN_24354	HOPX	NM_139211.2	NM_139211.2		84525	47717121	NM_139211.2	HOPX	NP_631957.1	ILMN_1766643	0001400068	I	50	CCCCAGGGGAGGTCCCCCTTTCGGGAGGAAGTTTTTAAGGGGATTTCTCA	4	-	57217309-57217358	4q12e	Homo sapiens HOP homeobox (HOPX), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17192267] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whereby a relatively unspecialized cell acquires the specialized features of a trophectoderm cell [goid 1829] [pmid 17576768] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that activates or increase the rate of skeletal muscle regeneration [goid 43415] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [pmid 17576768] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOP; MGC20820; LAGY; Cameo; SMAP31; OB1; Toto; NECC1	HOP; MGC20820; LAGY; Cameo; SMAP31; OB1; Toto; NECC1
Homo sapiens	RefSeq	NM_000872.3	ILMN_8849	HTR7	NM_000872.3	NM_000872.3		3363	30795200	NM_000872.3	HTR7	NP_000863.1	ILMN_1744217	0003780390	A	2972	CCAGACATGGGGAAAAGCTACCTTTCCTGAAAGGGGAGGAGGGCACTGTC	10	-	92490747-92490796	10q23.31d	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled) (HTR7), transcript variant a, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8226867] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 8226867] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8226867] [evidence TAS]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 8398139] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8226867] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 8226867] [evidence TAS]	5-HT7	5-HT7
Homo sapiens	RefSeq	NM_025264.2	ILMN_25512	THUMPD2	NM_025264.3	NM_025264.3		80745	142367052	NM_025264.3	THUMPD2	NP_079540.1	ILMN_1787511	0001230646	S	1606	CCAAGTAACCAAATTCCCCCAAAGACAGGAGGTGTGGCTGATGGGTACAC	2	-	39817233-39817282	2p22.1b	Homo sapiens THUMP domain containing 2 (THUMPD2), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	C2orf8; MGC2454	C2orf8; MGC2454
Homo sapiens	RefSeq	NM_032172.1	ILMN_162869	USP42	NM_032172.1	NM_032172.1		84132	79750943	NM_032172.1	USP42	NP_115548.1	ILMN_2115696	0007400465	S	4753	GCGTCTCTTGTCTTCACTGATACTGGAGTCTCCGTTGTCTGCTTGGTCCC	7	+	6167380-6167429	7p22.1b	Homo sapiens ubiquitin specific peptidase 42 (USP42), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	FLJ12697	FLJ12697
Homo sapiens	RefSeq	XM_291204.4	ILMN_45704	LOC340228	XM_291204.4	XM_291204.4		340228	89024893	XM_291204.4	LOC340228	XP_291204.2	ILMN_1657476	0002690373	S	241	CATGATCCTTATCCCCCACCATATGGGCCACATTATCCATTATTTCCACT	7	+	50106468-50106517		PREDICTED: Homo sapiens hypothetical LOC340228 (LOC340228), mRNA.					
Homo sapiens	RefSeq	NM_006562.4	ILMN_22021	LBX1	NM_006562.4	NM_006562.4		10660	63054871	NM_006562.4	LBX1	NP_006553.2	ILMN_2202133	0004230367	S	940	CCAGGACTGCTCGGAGGACGAGGAAGACGAAGAGATCGACGTGGACGATT	10	-	102987028-102987077	10q24.31a	Homo sapiens ladybird homeobox 1 (LBX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8645601] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; The process whereby a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed [goid 48664] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	homeobox; LBX1H; HPX6; HPX-6	homeobox; LBX1H; HPX6; HPX-6
Homo sapiens	RefSeq	NM_006562.4	ILMN_22021	LBX1	NM_006562.4	NM_006562.4		10660	63054871	NM_006562.4	LBX1	NP_006553.2	ILMN_2202134	0005810669	S	1204	TCCGCCGCCCCGGAAGCCCTCGCCGTGCAATTCTGTATGGCTTCTATATA	10	-	102986764-102986813	10q24.31a	Homo sapiens ladybird homeobox 1 (LBX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8645601] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; The process whereby a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed [goid 48664] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	homeobox; LBX1H; HPX6; HPX-6	homeobox; LBX1H; HPX6; HPX-6
Homo sapiens	RefSeq	NM_013345.2	ILMN_19860	GPR132	NM_013345.2	NM_013345.2		29933	30181231	NM_013345.2	GPR132	NP_037477.1	ILMN_1811171	0005870692	S	3160	GGGCTGAGCCACGCTCTCGTTTTGTCAGGCAGCTATGCAGTTGCTCTTCC	14	-	105516163-105516212	14q32.33c	Homo sapiens G protein-coupled receptor 132 (GPR132), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	G2A; MGC99642	G2A; MGC99642
Homo sapiens	RefSeq	NM_021178.2	ILMN_16541	CCNB1IP1	NM_182849.1	NM_182849.1		57820	33519435	NM_182849.1	CCNB1IP1	NP_878269.1	ILMN_1752394	0006450397	A	979	TCAGACCATTTTTTGCGGGTTCTCCCACAGCACCTGAACCCAGCAACAGC	14	-	20779789-20779838	14q11.2b	Homo sapiens cyclin B1 interacting protein 1 (CCNB1IP1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12612082] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	C14orf18; HEI10	C14orf18; HEI10
Homo sapiens	RefSeq	NR_030234.1	ILMN_387933	MIR507	NR_030234.1	NR_030234.1		574512	262205528	NR_030234.1	MIR507		ILMN_3311000	0001410128	S	1	TGCTGTGTGTAGTGCTTCACTTCAAGAAGTGCCATGCATGTGTCTAGAAA				Xq27.3e	Homo sapiens microRNA 507 (MIR507), microRNA.					
Homo sapiens	RefSeq	XM_944033.1	ILMN_18726	RBMS1	NM_002897.3	NM_002897.3		5937	46249390	NM_002897.3	RBMS1	NP_002888.1	ILMN_1766753	0003390180	A	1605	AATGACCATTCTCCATATACCTTTCAACCTAATAAGTAACTGTGAGATGT	2	-	160839517-160839521:160840387-160840393:160840394-160840431	2q24.2b	Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 7838710] [evidence TAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8041632] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 7838710] [evidence TAS]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 7838710] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8041632] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10869558] [evidence IPI]	MGC3331; MSSP-1; MSSP; YC1; SCR2; MSSP-3; MGC15146; MSSP-2	
Homo sapiens	RefSeq	NM_002897.3	ILMN_18726	RBMS1	NM_002897.3	NM_002897.3		5937	46249390	NM_002897.3	RBMS1	NP_002888.1	ILMN_2358541	0002060600	A	1976	CTGGGTATGCACAAAGACCATGAAGACTTATCCAAGTGCATGACCGGATT	2	-	160839146-160839195	2q24.2b	Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 7838710] [evidence TAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8041632] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 7838710] [evidence TAS]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 7838710] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8041632] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10869558] [evidence IPI]	MGC3331; MSSP-1; MSSP; YC1; SCR2; MSSP-3; MGC15146; MSSP-2	MGC3331; MSSP-1; MSSP; YC1; SCR2; MSSP-3; MGC15146; MSSP-2
Homo sapiens	RefSeq	NM_002897.3	ILMN_18726	RBMS1	NM_002897.3	NM_002897.3		5937	46249390	NM_002897.3	RBMS1	NP_002888.1	ILMN_2358540	0002470520	A	2104	TAGTCCGACTTCACCCATGGTGTTCTGTGCTTGCAGTGCGAGTGTTGCTG	2	-	160839018-160839067	2q24.2b	Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 7838710] [evidence TAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8041632] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 7838710] [evidence TAS]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 7838710] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8041632] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10869558] [evidence IPI]	MGC3331; MSSP-1; MSSP; YC1; SCR2; MSSP-3; MGC15146; MSSP-2	MGC3331; MSSP-1; MSSP; YC1; SCR2; MSSP-3; MGC15146; MSSP-2
Homo sapiens	RefSeq	XM_944019.1	ILMN_18726	RBMS1	NM_002897.3	NM_002897.3		5937	46249390	NM_002897.3	RBMS1	NP_002888.1	ILMN_1666444	0004150639	A	1375	GTGCCGTGTTAACTCCCTCAATGGAGCACACCATGTCACTACAGCCCGCA	2	-	160843364-160843413	2q24.2b	Homo sapiens RNA binding motif, single stranded interacting protein 1 (RBMS1), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 7838710] [evidence TAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 8041632] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 7838710] [evidence TAS]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 7838710] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8041632] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10869558] [evidence IPI]	MGC3331; MSSP-1; MSSP; YC1; SCR2; MSSP-3; MGC15146; MSSP-2	
Homo sapiens	Unigene	Hs.581151	ILMN_133332	HS.581151	Hs.581151		Hs.581151		51668335	CR748057			ILMN_1899093	0000510440	S	466	GTGCTTATCACACTGGGAGGATGGCAACTGGGCAAAGCAGACACAGAAGG	3	-	189198074-189198123		CR748057 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp971C1563 ; IMAGE:1560852 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001718349.1	ILMN_351148	LOC100133402	XM_001718349.1	XM_001718349.1		100133402	169218302	XM_001718349.1	LOC100133402	XP_001718401.1	ILMN_3248237	0004860682	S	1074	CTGGGGTTGTGGTTCCTGCTCCAGGTTGTCAGATGCTCACTTTGGGGTGC					PREDICTED: Homo sapiens hypothetical LOC100133402 (LOC100133402), mRNA.					
Homo sapiens	RefSeq	NM_001101341.1	ILMN_351530	SFTA3	NM_001101341.1	NM_001101341.1		253970	157412272	NM_001101341.1	SFTA3	NP_001094811.1	ILMN_3239821	0002120288	S	848	GCATCCCACGACGCTGTCACAAAGCAGGAGTTCATCCGAGGCCAAGATGT	14	-	36943082-36943086:36946176-36946220	14q13.3a	Homo sapiens surfactant associated 3 (SFTA3), mRNA.				FLJ23494	FLJ23494
Homo sapiens	RefSeq	NM_018092.3	ILMN_168668	NETO2	NM_018092.3	NM_018092.3		81831	24041025	NM_018092.3	NETO2	NP_060562.3	ILMN_1760849	0001580161	S	3191	GTTCACATCAGTGGCTTTGTATGCAAATATGCTGTGTTGGACCTGGACGC	16	-	47115854-47115903	16q12.1a	Homo sapiens neuropilin (NRP) and tolloid (TLL)-like 2 (NETO2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ14724; FLJ10430; NEOT2; FLJ90456	FLJ14724; FLJ10430; NEOT2; FLJ90456
Homo sapiens	RefSeq	XM_940559.1	ILMN_34418	LOC651407	XM_940559.1	XM_940559.1		651407	89061967	XM_940559.1	LOC651407	XP_945652.1	ILMN_1754347	0007560608	S	1	ATGAAAGTGGGTGTTGGGGAGGCGACGACGAGACTCCACCATGCCTGCAA					PREDICTED: Homo sapiens similar to Transmembrane protein 8 precursor (M83 protein) (LOC651407), mRNA.					
Homo sapiens	RefSeq	XM_001722106.1	ILMN_347081	LOC100129455	XM_001722106.1	XM_001722106.1		100129455	169163419	XM_001722106.1	LOC100129455	XP_001722158.1	ILMN_3190465	0003120376	A	384	GGAAATGAGATGTACATTTACCCTTGACGCACCGCAAGCCTGGCCGAGGC	2	-	176702172-176702221	2q31.1h	PREDICTED: Homo sapiens hypothetical protein LOC100129455 (LOC100129455), mRNA.					
Homo sapiens	RefSeq	XM_940700.1	ILMN_43602	LOC402571	XM_940700.1	XM_940700.1		402571	89026246	XM_940700.1	LOC402571	XP_945793.1	ILMN_1782286	0004250152	A	2	TGTGTGGCAGGTTCCTGAGGTGGTGGCTGCTGGCGGAGGAGAGCTGGCAC					PREDICTED: Homo sapiens similar to gap junction protein, epsilon 1, 29kDa (LOC402571), mRNA.					
Homo sapiens	RefSeq	NM_017563.1	ILMN_7284	IL17RD	NM_017563.1	NM_017563.1		54756	24308146	NM_017563.1	IL17RD	NP_060033.1	ILMN_1728663	0003450091	S	3966	GAGCTCCTACCCACACATGACTGCCCCGCCATTTCATCCTAGGCATTCTG	3	-	57103755-57103804	3p14.3b	Homo sapiens interleukin 17 receptor D (IL17RD), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	DKFZp434N1928; IL-17RD; SEF; IL17RLM; FLJ35755	FLJ35755; DKFZp434N1928; IL-17RD; SEF; IL17RLM
Homo sapiens	RefSeq	NM_032449.1	ILMN_166507	CC2D1B	NM_032449.1	NM_032449.1		200014	61742813	NM_032449.1	CC2D1B	NP_115825.1	ILMN_2149935	0000730497	S	5502	GGAGATTAGTGACTCACCTGCAGTTGGGAGCCAGCTACAACCCAAATCAT	1	-	52816354-52816403	1p32.3d	Homo sapiens coiled-coil and C2 domain containing 1B (CC2D1B), mRNA.				RP11-155O18.2; KIAA1836	RP11-155O18.2; KIAA1836
Homo sapiens	RefSeq	NM_012461.1	ILMN_4517	TINF2	NM_012461.1	NM_012461.1		26277	6912715	NM_012461.1	TINF2	NP_036593.1	ILMN_1697420	0001740471	S	1848	CCTTGATACCCACTTTTTGTGAATACCTACCCCCTTCTGGCCACGGTGCC	14	-	23778890-23778939	14q12a	Homo sapiens TERF1 (TRF1)-interacting nuclear factor 2 (TINF2), mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [pmid 10581025] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16166375] [evidence EXP]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [evidence IEA]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 10581025] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10581025] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12768206] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [pmid 12768206] [evidence IDA]	TIN2	TIN2
Homo sapiens	RefSeq	XM_928242.2	ILMN_31156	TMEM14D	XM_928242.2	XM_928242.2		645203	113421601	XM_928242.2	TMEM14D	XP_933335.1	ILMN_3244248	0007160088	S	145	GCCGGCGTGGGTGCTTACCAGCTGTATCAGGATCCAAGGAATGTTTGGGA	10	-	69974402-69974451	10q21.3d	PREDICTED: Homo sapiens transmembrane protein 14D (TMEM14D), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.246726	ILMN_83164	HS.246726	Hs.246726		Hs.246726		7149030	AW510952			ILMN_1834780	0004890767	S	403	AAAGTAGGAGCTGATGTAGAGTGCCCCACGTCTGGTGGTAGAGAGGTGGC	6	-	135423715-135423764		hd41g03.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2912116 3, mRNA sequence					
Homo sapiens	RefSeq	XM_946103.1	ILMN_33217	LOC652850	XM_946103.1	XM_946103.1		652850	89065010	XM_946103.1	LOC652850	XP_951196.1	ILMN_1708538	0000730017	S	519	GGCTGCACCAAAACACCAGGAAGAAAAGGATGGGGCACGGCTGCACAGTT					PREDICTED: Homo sapiens hypothetical protein LOC652850 (LOC652850), mRNA.					
Homo sapiens	RefSeq	XM_926200.1	ILMN_45153	LOC642785	XM_926200.1	XM_926200.1		642785	89041524	XM_926200.1	LOC642785	XP_931293.1	ILMN_1674992	0003990717	S	61	GCACATACAGCAGACAAGCTTTACCTGGGCAAGTCTGCAGGAAGTGCTGG	17	+	34419817-34419865:34422007-34422007		PREDICTED: Homo sapiens similar to RAD52 homolog B (LOC642785), mRNA.					
Homo sapiens	RefSeq	XM_375033.2	ILMN_35846	LOC144776	XM_375033.2	XM_375033.2		144776	89036825	XM_375033.2	LOC144776	XP_375033.1	ILMN_1653833	0007650039	A	1730	TCATCAGCAGGAGGCCACACCAGGTACACAGGATGAGCAAAGCCAGAGAC	13	-	90341441-90341490		PREDICTED: Homo sapiens hypothetical protein LOC144776 (LOC144776), mRNA.					
Homo sapiens	Unigene	Hs.538798	ILMN_104126	HS.538798	Hs.538798		Hs.538798		2807014	AA759151			ILMN_1906685	0001430538	S	43	CCTGCTTGCTCACTTCCACTTACAGGTGGCTCCGTGGCAGGTCATCCATC	11	-	104103598-104103647		ah70e05.s1 Soares_testis_NHT Homo sapiens cDNA clone 1320992 3, mRNA sequence					
Homo sapiens	Unigene	Hs.543560	ILMN_107128	HS.543560	Hs.543560		Hs.543560		5935648	AL042977			ILMN_1831440	0007200138	S	538	TCTGATGCCAAAAGGTACTTACAATGACCATGCTTGGGGTTAGAAGGCCG	4	-	80315352-80315401		DKFZp434M0522_s1 434 (synonym: htes3) Homo sapiens cDNA clone DKFZp434M0522 3, mRNA sequence					
Homo sapiens	RefSeq	XM_941959.1	ILMN_37887	LOC652495	XM_941959.1	XM_941959.1		652495	89062906	XM_941959.1	LOC652495	XP_947052.1	ILMN_1722948	0006660170	S	348	ACTCTTCCTGCTAAGCGTGTGCTACAGTGCCACCATCACCTTCTTCAAGG					PREDICTED: Homo sapiens similar to Ig gamma-3 chain C region, membrane-bound form (LOC652495), mRNA.					
Homo sapiens	RefSeq	XM_379398.3	ILMN_32774	LOC401237	XM_379398.3	XM_379398.3		401237	88992536	XM_379398.3	LOC401237	XP_379398.1	ILMN_1656131	0001470546	S	121	GGAAAAAGTGTCCGAACGCCTCGTGGACTGCAGCGGGGGAAATGTCCCTT	6	+	21774780-21774820:21774821-21774829		PREDICTED: Homo sapiens hypothetical LOC401237 (LOC401237), mRNA.					
Homo sapiens	RefSeq	NR_015453.1	ILMN_366450	C4ORF10	NR_015453.1	NR_015453.1		317648	197209879	NR_015453.1	C4orf10		ILMN_3247844	0007560736	S	3289	GGTGTACAGTGGCTGCGGGCTTTAGCAGGAGGAGTGTCTACAGCACCTTC	4	+	2952223-2952272		Homo sapiens chromosome 4 open reading frame 10 (C4orf10), non-coding RNA.					
Homo sapiens	RefSeq	NM_003304.3	ILMN_182033	TRPC1	NM_003304.4	NM_003304.4		7220	93141224	NM_003304.4	TRPC1	NP_003295.1	ILMN_1674380	0004180008	S	3691	CCACAGGGTGCAGGTAACCCTTGGTCTGTAAGCACCACCGATCCAGGGAT	3	+	142526352-142526401	3q23d	Homo sapiens transient receptor potential cation channel, subfamily C, member 1 (TRPC1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8663995] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7568191] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 8646775] [evidence TAS]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15757897] [evidence IPI];  [goid 15279] [pmid 8663995] [evidence TAS]	HTRP-1; MGC133335; TRP1; MGC133334	HTRP-1; TRP1
Homo sapiens	Unigene	Hs.225083	ILMN_82630	HS.225083	Hs.225083		Hs.225083		9151026	BE276063			ILMN_1867134	0006270601	S	489	CTTCTGGATGGGAATCCTGGAGCCACCACTTGCCCTATGGTCGCAATGGG	1	-	149519015-149519064		601122564F1 NIH_MGC_20 Homo sapiens cDNA clone IMAGE:3346815 5, mRNA sequence					
Homo sapiens	RefSeq	NM_013434.3	ILMN_6514	KCNIP3	NM_013434.4	NM_013434.4		30818	78190493	NM_013434.4	KCNIP3	NP_038462.1	ILMN_1744403	0001260669	S	2824	CCTTGGCCACGGCCTGGGAGGGTGGTTCCTGTTCTCAGCATCCACTAATA	2	+	95415462-95415511	2q11.1c	Homo sapiens Kv channel interacting protein 3, calsenilin (KCNIP3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10078534] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10900016] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10078534] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10078534] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10900016] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DREAM; CSEN; MGC18289; KCHIP3	KCNIP3; DREAM; MGC18289; KCHIP3
Homo sapiens	RefSeq	NM_020140.2	ILMN_18914	ANKS1B	NM_020140.2	NM_020140.2		56899	50511948	NM_020140.2	ANKS1B	NP_064525.1	ILMN_2340974	0006660463	A	1258	CCAGCTAGCACTACAAGCAAGAAAAGGGGGACACTCCTCCACACTTCCAG	12	-	99145197-99145246	12q23.1c-q23.1d	Homo sapiens ankyrin repeat and sterile alpha motif domain containing 1B (ANKS1B), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]			MGC26087; ANKS2; AIDA; cajalin-2; EB-1; AIDA-1	MGC26087; ANKS2; AIDA; cajalin-2; EB-1; AIDA-1
Homo sapiens	RefSeq	NM_172003.2	ILMN_19422	CBWD2	NM_172003.2	NM_172003.2		150472	38016203	NM_172003.2	CBWD2	NP_742000.1	ILMN_1657312	0005870181	S	1388	AAATGTAGCAAATCGGTACTGTAAAACATTTAACATTCATACAGTTATAT	2	+	113969927-113969976	2q14.1a	Homo sapiens COBW domain containing 2 (CBWD2), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_138784.1	ILMN_36484	FMO9P	NR_002925.2	NR_002925.2		116123	148806882	NR_002925.2	FMO9P		ILMN_1771544	0006550102	S	1218	GCAGCCTTTATCTGGAAATCAGTGGGCAGCTCTGGTCAAGCACAGCATGG	1	+	164860953-164861002	1q24.1b	Homo sapiens flavin containing monooxygenase 9 pseudogene (FMO9P), non-coding RNA.			Catalysis of the reaction: N,N-dimethylaniline + NADPH + H+ + O2 = N,N-dimethylaniline N-oxide + NADP+ + H2O [goid 4499] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]	MGC23941	
Homo sapiens	RefSeq	XM_001715625.1	ILMN_343015	LOC728690	XM_001715625.1	XM_001715625.1		728690	169161489	XM_001715625.1	LOC728690	XP_001715677.1	ILMN_3301688	0000020730	M	389	ACTGTGGGAACAGGGAGGCTCCAGGTGGTCCTGAGGAGGCCGTTGGCTTA				1p36.33a	PREDICTED: Homo sapiens hypothetical protein LOC728690 (LOC728690), mRNA.					
Homo sapiens	RefSeq	NM_006907.2	ILMN_10638	PYCR1	NM_006907.2	NM_006907.2		5831	24797096	NM_006907.2	PYCR1	NP_008838.2	ILMN_1715178	0002320161	I	1356	GGGACATAGCCAGGGAGGGGCCACATCACTTCCCACTGGAAATCTCTGTG	17	-	79890922-79890971	17q25.3g	Homo sapiens pyrroline-5-carboxylate reductase 1 (PYCR1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [pmid 1730675] [evidence TAS]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [pmid 1730675] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	P5CR; P5C; PP222; PYCR; PIG45	P5CR; P5C; PP222; PYCR; PIG45
Homo sapiens	RefSeq	XM_932149.1	ILMN_32090	LOC644366	XM_932149.2	XM_932149.2		644366	113426933	XM_932149.2	LOC644366	XP_937242.2	ILMN_1652466	0001770424	S	445	GGCCCTCTCTAGCCATGAGAAGTGTCACCACTAGCCATCAAAATGCTCCC	17	-	42263054-42263103	17q21.32a	PREDICTED: Homo sapiens hypothetical LOC644366 (LOC644366), mRNA.					
Homo sapiens	RefSeq	NM_015169.3	ILMN_176178	RRS1	NM_015169.3	NM_015169.3		23212	46094056	NM_015169.3	RRS1	NP_055984.1	ILMN_1767658	0004120437	S	1292	CCTGGCCGCTGCCTTCATTGAGTTTAAAGGGACAGGATTGCCCTTCCGTC	8	+	67342554-67342603	8q13.1b	Homo sapiens RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) (RRS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		KIAA0112	KIAA0112
Homo sapiens	RefSeq	XR_037296.1	ILMN_352577	LOC389768	XR_037296.1	XR_037296.1		389768	169180000	XR_037296.1	LOC389768		ILMN_3219550	0004290187	A	746	GTGGTGACAAATCCTTGGTAGAAGAAGTGTTTCCAGAGATCGGCGATGTG				9q22.1b	PREDICTED: Homo sapiens misc_RNA (LOC389768), miscRNA.					
Homo sapiens	RefSeq	NM_001007238.1	ILMN_9272	HRES1	NM_001007238.1	NM_001007238.1		3272	55925617	NM_001007238.1	HRES1	NP_001007239.1	ILMN_1800315	0003400706	S	617	TGAGGTGGGCAGAGCGGCAGGTGGGGGCGTTGGGGGCTGAGTCCCGATTT	1	-	227473303-227473352		Homo sapiens HTLV-1 related endogenous sequence (HRES1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	XM_943112.1	ILMN_38840	KIAA1211	XM_943112.1	XM_943112.1		57482	88980299	XM_943112.1	KIAA1211	XP_948205.1	ILMN_1735617	0000780328	I	578	TCTGCTCCTGAAGAAGGGGATGGCTCAAGACAGTGCTGCCGCCCAGACAA				4q12d	PREDICTED: Homo sapiens KIAA1211 protein, transcript variant 2 (KIAA1211), mRNA.					
Homo sapiens	RefSeq	XM_001719435.1	ILMN_335556	LOC100129000	XM_001719435.1	XM_001719435.1		100129000	169170070	XM_001719435.1	LOC100129000	XP_001719487.1	ILMN_3253692	0001260639	M	181	TGTGAGCGGTGCGGATCCCTGGAGGGAGACATGGCGCGGTTTGCTCCTGC	7	+	62491897-62491926:62491927-62491946	7q11.21b	PREDICTED: Homo sapiens similar to hCG1647535, transcript variant 2 (LOC100129000), mRNA.					
Homo sapiens	Unigene	Hs.485841	ILMN_96126	HS.485841	Hs.485841		Hs.485841		13727750	BG206063			ILMN_1870021	0007560088	S	474	GCACTGATGGAGGAGCACTGTACTGAACTTTAGGAATGAAGCCACAGGGC	6	-	82611866-82611915		RST25498 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_001720358.1	ILMN_339904	LOC100134308	XM_001720358.1	XM_001720358.1		100134308	169217575	XM_001720358.1	LOC100134308	XP_001720410.1	ILMN_3239520	0003400519	S	1168	GCCTACGACCTACAGAGCGACGTAAGTGTGTCCCCCAGGAAACAAGTCCC					PREDICTED: Homo sapiens similar to nebulin (LOC100134308), mRNA.					
Homo sapiens	RefSeq	XM_937789.1	ILMN_41272	LOC648706	XM_937789.1	XM_937789.1		648706	89039204	XM_937789.1	LOC648706	XP_942882.1	ILMN_1768368	0006590706	S	1461	ATGACCCGCCTGCCAAGGACATCATTGACTTCCCATCAGTGCTGCCTGGG					PREDICTED: Homo sapiens similar to ADAMTS-7 precursor (A disintegrin and metalloproteinase with thrombospondin motifs 7) (ADAM-TS 7) (ADAM-TS7) (LOC648706), mRNA.					
Homo sapiens	RefSeq	XM_928996.3	ILMN_44341	LOC646034	XM_928996.3	XM_928996.3		646034	169191955	XM_928996.3	LOC646034	XP_934089.1	ILMN_3290120	0005910736	M	2523	GTCTGGGTTGATCCTGTGACACAGTTATGCCTTCTACCCTCTGCTGCTTC	10	+	31934606-31934655	10p11.22c	PREDICTED: Homo sapiens hypothetical LOC646034 (LOC646034), mRNA.					
Homo sapiens	RefSeq	XM_931927.1	ILMN_34695	DDX12	XM_931927.1	XM_931927.1		440081	89035342	XM_931927.1	DDX12	XP_937020.1	ILMN_1690592	0000730600	I	243	GCAGGGGAGATTGGGTTTAGGGGCTTTCCTGGTCTGCATTCTGCTACAGC	12	-	9487754-9487803	12p13.31a	PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 22 (DDX12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]		
Homo sapiens	RefSeq	NM_006445.2	ILMN_19289	PRPF8	NM_006445.3	NM_006445.3		10594	91208425	NM_006445.3	PRPF8	NP_006436.3	ILMN_1738677	0006060349	S	7100	ATCGGGAGGACCTGTATGCCTGACCGTTTCCCTGCCTCCTGCTTCAGCCT	17	-	1554068-1554095:1554096-1554117	17p13.3e	Homo sapiens PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) (PRPF8), mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; Ribonucleoprotein complex containing small nuclear RNA U5; a component of both the major and minor spliceosome complexes [goid 5682] [pmid 9774689] [evidence TAS]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9774689] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9774689] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9774689] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9774689] [evidence TAS]	HPRP8; PRPC8; RP13; PRP8	HPRP8; PRPC8; RP13; PRP8
Homo sapiens	RefSeq	NM_198451.1	ILMN_18394	FOXR2	NM_198451.1	NM_198451.1		139628	38348218	NM_198451.1	FOXR2	NP_940853.1	ILMN_1711758	0000830253	S	1759	TCCTTCAGAACCTCACTTTTCTATTTCTGGCCCTGGACTTCTAAGCCTTG	X	+	55668316-55668365	Xp11.21a	Homo sapiens forkhead box R2 (FOXR2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FOXN6; MGC21658	MGC21658; FOXN6
Homo sapiens	RefSeq	NM_020709.1	ILMN_307127	PNMAL2	NM_020709.1	NM_020709.1		57469	146219840	NM_020709.1	PNMAL2	NP_065760.1	ILMN_3245239	0000430184	S	4527	GAGACGTCCTCTTAGAAGTCACACCTGGGGTCTGATTGCGTCCCTCGCCT	19	-	51686433-51686482	19q13.32b	Homo sapiens PNMA-like 2 (PNMAL2), mRNA.				FLJ42730; KIAA1183	FLJ42730; KIAA1183
Homo sapiens	RefSeq	NM_005146.3	ILMN_169853	SART1	NM_005146.4	NM_005146.4		9092	119393884	NM_005146.4	SART1	NP_005137.1	ILMN_1680145	0005130095	S	3128	GTGAGCCTCAAATCCATAGAAAGACAAACGGCCACCTTGGGTGCCCAGGA	11	+	65503710-65503759	11q13.1d	Homo sapiens squamous cell carcinoma antigen recognized by T cells (SART1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9856836] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10929426] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 16158934] [evidence NAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [pmid 16158934] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cytotoxic T cell differentiation [goid 45585] [pmid 10209962] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC2038; Snu66; SART1259; Ara1; HOMS1	MGC2038; SART1259; Ara1; HOMS1
Homo sapiens	RefSeq	NM_018443.2	ILMN_26438	ZNF302	NM_018443.2	NM_018443.2		55900	59850648	NM_018443.2	ZNF302	NP_060913.2	ILMN_2307450	0005490524	A	2484	AGCTAGTGGGCATGTGAAGATATTTAGTCACCCAGAGGAGCCAGTAAATG	19	+	35177163-35177212	19q13.11c	Homo sapiens zinc finger protein 302 (ZNF302), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSD16; ZNF327; MST154; ZNF135L; ZNF140L; MSTP154	HSD16; ZNF327; MST154; ZNF135L; ZNF140L; MSTP154
Homo sapiens	RefSeq	XM_943708.1	ILMN_34581	LOC649432	XM_943708.1	XM_943708.1		649432	88988389	XM_943708.1	LOC649432	XP_948801.1	ILMN_1706749	0005690730	S	245	CAGCACGAATTGAAGGTTTGACCAGAGACAAAGAAGCAAATGCTATCAAT					PREDICTED: Homo sapiens hypothetical protein LOC649432 (LOC649432), mRNA.					
Homo sapiens	RefSeq	XM_085261.4	ILMN_42432	MESP2	NM_001039958.1	NM_001039958.1		145873	90403597	NM_001039958.1	MESP2	NP_001035047.1	ILMN_1751911	0006980079	A	893	CAGCAACTTTGGAGCTGGCCGCAGTGTACCAGGGTCTCTCTGTGTCTCCA	15	+	88121485-88121516:88122300-88122317	15q26.1b	Homo sapiens mesoderm posterior 2 homolog (mouse) (MESP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	SCDO2	
Homo sapiens	RefSeq	XM_001725425.1	ILMN_336652	LOC100129759	XM_001725425.1	XM_001725425.1		100129759	169214637	XM_001725425.1	LOC100129759	XP_001725477.1	ILMN_3254984	0006980482	M	68	TACATTTGGGGTGGTACAGAATCAAAAGCAGCCCTGTTTTCCAAATACCT	20	-	10349268-10349317	20p12.2b	PREDICTED: Homo sapiens similar to PNAS-117 (LOC100129759), mRNA.					
Homo sapiens	RefSeq	XR_016523.1	ILMN_181554	LOC643387	XR_016523.1	XR_016523.1		643387	113413533	XR_016523.1	LOC643387		ILMN_3285346	0001710136	M	2172	GCGAGATGTGTTTCTCAATCCTGCGGCTTTGGTGACAGTGTGCAGACAGC	2	+	238807237-238807286	2q37.3c	PREDICTED: Homo sapiens misc_RNA (LOC643387), miscRNA.					
Homo sapiens	RefSeq	XM_945724.1	ILMN_42422	LOC642597	XM_931384.2	XM_931384.2		642597	113427670	XM_931384.2	LOC642597	XP_936477.1	ILMN_1676613	0000610382	A	55	CAGGTGAGAAACCTGGAAATGAGCCTGAAGAGGTGAAGCTGCAGAATGCC	18	-	5135707-5135754:5187451-5187452	18p11.31c	PREDICTED: Homo sapiens hypothetical LOC642597, transcript variant 1 (LOC642597), mRNA.					
Homo sapiens	RefSeq	NM_006395.1	ILMN_17242	ATG7	NM_006395.1	NM_006395.1		10533	5453667	NM_006395.1	ATG7	NP_006386.1	ILMN_1790978	0005220754	S	2288	GGCCAGTGTTCGGCGTTGCTCGGGATTCAAGATACCACCAGTTCAGAGCT	3	+	11571483-11571532	3p25.3a-p25.2b	Homo sapiens ATG7 autophagy related 7 homolog (S. cerevisiae) (ATG7), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10233149] [evidence TAS]	The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [pmid 12890687] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 10233149] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein [goid 31401] [pmid 12890687] [evidence IDA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the activation of the C-terminal carboxyl group of ubiquitin by the formation of a high-energy thiolester bond in an ATP-dependent manner [goid 4839] [pmid 10233149] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11825910] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11096062] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11096062] [evidence IDA]	APG7L; DKFZp434N0735; GSA7	APG7L; DKFZp434N0735; GSA7
Homo sapiens	RefSeq	XM_001720391.1	ILMN_342581	LOC729339	XM_001720391.1	XM_001720391.1		729339	169172793	XM_001720391.1	LOC729339	XP_001720443.1	ILMN_3241707	0006220100	S	827	CCCAGCCCTGCGGTCCCCTCAGTCAACTCTGTTTCGGAGAGGTAACGATT	8	+	7415192-7415241	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC729339 (LOC729339), mRNA.					
Homo sapiens	RefSeq	NM_004155.3	ILMN_162722	SERPINB9	NM_004155.3	NM_004155.3		5272	34147494	NM_004155.3	SERPINB9	NP_004146.1	ILMN_1742052	0001230156	S	3099	CAGACAAACTGTTTTCCACAGCAGTTGAACCATTCCACATTCCCACCAGC	6	-	2833461-2833510	6p25.2b	Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 9 (SERPINB9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8910377] [evidence TAS]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 8910377] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8910377] [evidence TAS]	PI9; CAP-3; CAP3	PI9; CAP-3; CAP3
Homo sapiens	RefSeq	NM_004155.3	ILMN_162722	SERPINB9	NM_004155.3	NM_004155.3		5272	34147494	NM_004155.3	SERPINB9	NP_004146.1	ILMN_2184250	0001980154	S	3711	CCACATTGGCCGTGTTGGTCTTGAACTCCTGGCCTCAAGCAATCCGCCTA	6	-	2832849-2832898	6p25.2b	Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 9 (SERPINB9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8910377] [evidence TAS]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 8910377] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8910377] [evidence TAS]	PI9; CAP-3; CAP3	PI9; CAP-3; CAP3
Homo sapiens	RefSeq	XM_001721665.1	ILMN_351554	LOC100130798	XM_001721665.1	XM_001721665.1		100130798	169167365	XM_001721665.1	LOC100130798	XP_001721717.1	ILMN_3272243	0005890575	M	1101	GCATTCACTCACTGCCCCATGCCTAAAGTCACCAACTCTCAGACCTCCTG	5	+	178349489-178349538	5q35.3c	PREDICTED: Homo sapiens similar to hCG2045013 (LOC100130798), mRNA.					
Homo sapiens	RefSeq	NM_024552.1	ILMN_29022	LASS4	NM_024552.1	NM_024552.1		79603	13375716	NM_024552.1	LASS4	NP_078828.1	ILMN_1748057	0006590139	S	1505	TGCCTTGGATATTTCTGGGGTGGCTAGACTGGCGCCCCTGGGCCACCTTT	19	+	8233033-8233082	19p13.2d	Homo sapiens LAG1 homolog, ceramide synthase 4 (LASS4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ceramides, any N-acylated sphingoid [goid 46513] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ12089; Trh1; CerS4	FLJ12089; Trh1; CerS4
Homo sapiens	Unigene	Hs.580199	ILMN_132380	HS.580199	Hs.580199		Hs.580199		83153989	DB311944			ILMN_1845221	0003440273	S	265	CTCCAGCATGGATTTCTCCCCTAAATTGCAGCTTTAAGATCTGACAGTCC					DB311944 BRTHA2 Homo sapiens cDNA clone BRTHA2035479 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016453.2	ILMN_20435	NCKIPSD	NM_016453.2	NM_016453.2		51517	37577149	NM_016453.2	NCKIPSD	NP_057537.1	ILMN_2382271	0005360703	A	2440	ATGGTCTGGGAGCTGTTCTGGGGCAGGGGGAATATGCAAGCTAAAGCCCC	3	-	48711750-48711799	3p21.31e	Homo sapiens NCK interacting protein with SH3 domain (NCKIPSD), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 10619843] [evidence NAS]	The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane [goid 6607] [pmid 10648423] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 10619843] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10648423] [evidence TAS]	Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [pmid 10619843] [evidence NAS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	DIP; WISH; AF3P21; MGC23891; SPIN90; DIP1; ORF1; WASLBP	DIP; WISH; AF3P21; MGC23891; SPIN90; DIP1; ORF1; WASLBP
Homo sapiens	RefSeq	NR_024066.1	ILMN_366088	CLRN1OS	NR_024066.1	NR_024066.1		116933	195947408	NR_024066.1	CLRN1OS		ILMN_3246345	0000380204	S	1804	GACCTAAGTTTGTGTGGCCCCCTTCGTTCTCCAGAAACCAACCAGTCAGC	3	+	150797376-150797425		Homo sapiens clarin 1 opposite strand (CLRN1OS), non-coding RNA.					
Homo sapiens	RefSeq	NM_001023571.1	ILMN_9902	IQCB1	NM_001023571.1	NM_001023571.1		9657	66571279	NM_001023571.1	IQCB1	NP_001018865.1	ILMN_2316104	0004490403	A	1401	GGCCAAGCAGGCCCATCTCACAACCCTGAAGCACATACAAGCACCCTGGT	3	-	122971991-122972040	3q13.33c	Homo sapiens IQ motif containing B1 (IQCB1), transcript variant 3, mRNA.	A 9+0 cilium that forms the portion of the axoneme traversing the boundary between the photoreceptor inner and outer segments [goid 32391] [pmid 15723066] [evidence IDA]	Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [pmid 15723066] [evidence IMP]; The process by which the identity of an organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized [goid 48496] [pmid 15723066] [evidence IMP]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 15723066] [evidence IDA]	SLSN5; PIQ; NPHP5	SLSN5; PIQ; NPHP5
Homo sapiens	RefSeq	NM_052817.1	ILMN_18521	MID2	NM_052817.1	NM_052817.1		11043	16445408	NM_052817.1	MID2	NP_438112.1	ILMN_2382648	0000450326	A	2264	CTGCAGGCCTCAAGAATCCCCTTATGTTTCTGGGATGAAAACCTGTCATT	X	+	107056908-107056957	Xq22.3b-q22.3c	Homo sapiens midline 2 (MID2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 10400986] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRIM1; RNF60; MID1; FXY2	TRIM1; RNF60; MID1; FXY2
Homo sapiens	RefSeq	NM_052817.1	ILMN_18521	MID2	NM_052817.1	NM_052817.1		11043	16445408	NM_052817.1	MID2	NP_438112.1	ILMN_1760180	0002450193	A	2204	GATCCTGTCTGGCTTGCCTGCCCCAGATTTTATTGATTACCCTGAGCGGC	X	+	107056848-107056897	Xq22.3b-q22.3c	Homo sapiens midline 2 (MID2), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 10400986] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRIM1; RNF60; MID1; FXY2	TRIM1; RNF60; MID1; FXY2
Homo sapiens	RefSeq	NM_001080856.1	ILMN_182529	LOC729164	NM_001080856.1	NM_001080856.1		729164	124249231	NM_001080856.1	LOC729164	NP_001074325.1	ILMN_2120360	0005560291	S	754	CCCATCAGCCACTCACCAGCCATCCTAACTCCATCGGCCACCTTCCTAAT				2q13a	Homo sapiens hCG1732469 (LOC729164), mRNA.					
Homo sapiens	RefSeq	NM_001001411.1	ILMN_168535	ZNF208	NM_007153.2	NM_007153.2		7757	112421109	NM_007153.2	ZNF208	NP_009084.1	ILMN_1793317	0005550128	S	4144	GAGACTCTACAAACCTGAAAGATGTGACAATGCTTTTGGCAACACCTCAG	19	-	21944786-21944835	19p12c	Homo sapiens zinc finger protein 208 (ZNF208), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9724325] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF95; PMIDP	
Homo sapiens	RefSeq	NM_007153.1	ILMN_168535	ZNF208	NM_007153.2	NM_007153.2		7757	112421109	NM_007153.2	ZNF208	NP_009084.1	ILMN_1662777	0005270463	S	3587	TCATACTGGAGTTCCCAACCCTCCTACACATAAGAAAATTCATGCTGGAG	19	-	21945343-21945382:21945846-21945855	19p12c	Homo sapiens zinc finger protein 208 (ZNF208), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9724325] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF95; PMIDP	PMIDP
Homo sapiens	RefSeq	NM_012123.2	ILMN_15725	MTO1	NM_012123.2	NM_012123.2		25821	74024894	NM_012123.2	MTO1	NP_036255.2	ILMN_2380740	0005130605	A	2017	GCTAGTCGCATACCCGGAGTAACACCTGCCGCCATCATCAATCTGCTGAG	6	+	74267027-74267076	6q13c	Homo sapiens mitochondrial translation optimization 1 homolog (S. cerevisiae) (MTO1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	CGI-02	CGI-02
Homo sapiens	RefSeq	XM_001131089.1	ILMN_163622	LOC729703	XM_001131089.1	XM_001131089.1		729703	113416490	XM_001131089.1	LOC729703	XP_001131089.1	ILMN_3244717	0001690491	S	189	CTCAGCTCCTCCTGCAGCCAAAAGACGGAAAACACATACGAAAGGCAAGA	5	-	17610627-17610676	5p15.1a	PREDICTED: Homo sapiens similar to hCG1809904 (LOC729703), mRNA.					
Homo sapiens	RefSeq	XM_945654.1	ILMN_137733	CTNNB1	XM_945654.1	XM_945654.1		1499	88968762	XM_945654.1	CTNNB1	XP_950747.1	ILMN_1785786	0005810184	I	392	GCCTCTTGCACTCTGAATTGGGAATGTTTGCACCACAGTGGGGGGCTTGC				3p22.1b	PREDICTED: Homo sapiens catenin (cadherin-associated protein), beta 1, 88kDa, transcript variant 8 (CTNNB1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9065401] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16753179] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11955436] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12000790] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15327769] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12820959] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 7806582] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10837025] [evidence TAS]; An electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains gap junctions and desmosomes. Most of the disc is formed of a convoluted fascia adherens type of junction into which the actin filaments of the terminal sarcomeres insert (or in the case of muscle cells, myofibrils), desmosomes are also present. The lateral portion of the stepped disc contains gap junctions that couple the cells electrically and thus coordinate the contraction [goid 5916] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IEA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 12072559] [evidence IDA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome [goid 30877] [pmid 16188939] [evidence IDA]; A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome [goid 30877] [pmid 9601641] [evidence IDA]; The portion of the plasma membrane surrounding a microvillus [goid 31528] [evidence IEA]; A functional unit located near the cell apex at the points of contact between epithelial cells, which in vertebrates is composed of the tight junction, the zonula adherens, and desmosomes and in invertebrates is composed of the subapical complex (SAC), the zonula adherens and the septate junction. Functions in the regulation of cell polarity, tissue integrity and intercellular adhesion and permeability [goid 43296] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The change in form (cell shape and size) that occurs when relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history [goid 904] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The formation of the endoderm during gastrulation [goid 1706] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; The process by which a cell becomes committed to become part of the endoderm [goid 1711] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [pmid 14679171] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IEA]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of epithelial cell differentiation [goid 30858] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating enzymes [goid 31016] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of chondrocyte differentiation [goid 32331] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. Morphogenesis pertains to the creation of form. The hindlimbs are the posterior limbs of an animal [goid 35116] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the arm are generated and organized. Morphogenesis pertains to the creation of form. In humans, the arms are the two upper limbs of the body from the shoulder to the hand [goid 35117] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IEA]; The process by which specialized cells known as osteoclasts degrade the organic and inorganic portions of bone, and endocytose and transport the degradation products [goid 45453] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 15572661] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IEA]; The process by which the anatomical structures of the eye are generated and organized. Morphogenesis pertains to the creation of form. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 48593] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [pmid 9601641] [evidence IC ]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10192393] [evidence NAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10773885] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with the alpha subunit of the catenin complex [goid 45294] [evidence IEA]; Interacting selectively with cadherin, a type I membrane protein involved in cell adhesion [goid 45296] [evidence IEA]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]		
Homo sapiens	RefSeq	NM_032343.1	ILMN_19685	CHCHD6	NM_032343.1	NM_032343.1		84303	14150133	NM_032343.1	CHCHD6	NP_115719.1	ILMN_1785161	0000450072	S	636	TTGCAGGCCCAGATTCTCCACTGCTACCGAGATCGCCCGCATGAGGTGCT	3	+	126676290-126676339	3q21.3a	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 6 (CHCHD6), mRNA.				MGC13016	MGC13016
Homo sapiens	RefSeq	NM_002106.3	ILMN_4220	H2AFZ	NM_002106.3	NM_002106.3		3015	53759146	NM_002106.3	H2AFZ	NP_002097.1	ILMN_1707858	0002710292	S	611	ACTCTAACAGCTGTCCAGTGTTGGTGATTCCAGTGGACTGTATCTCTGTG	4	-	101088553-101088602	4q23b	Homo sapiens H2A histone family, member Z (H2AFZ), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2A/z; H2AZ; H2A.z; MGC117173	H2A/z; MGC117173; H2AZ; H2A.z
Homo sapiens	RefSeq	NM_015247.2	ILMN_28818	CYLD	NM_015247.2	NM_015247.2		1540	109637772	NM_015247.2	CYLD	NP_056062.1	ILMN_2287941	0002600017	I	243	TTTGTGCCTTCCAACTCTCGTCTTGGTTGAATGACTTCATCTTAATACAA	16	+	49336229-49336278	16q12.1c	Homo sapiens cylindromatosis (turban tumor syndrome) (CYLD), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10835629] [evidence NAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	CYLDI; KIAA0849; FLJ78684; USPL2; FLJ31664; CDMT; FLJ20180; HSPC057; EAC; CYLD1	KIAA0849; USPL2; CDMT; HSPC057; CYLD1; EAC
Homo sapiens	RefSeq	NM_139165.1	ILMN_10488	RAET1E	NM_139165.1	NM_139165.1		135250	21040248	NM_139165.1	RAET1E	NP_631904.1	ILMN_2164007	0006130097	S	792	CTGTGTCTGGTGGCAAAATGGTGAGTGGCAGGCTGGTCTCTGGCCCTTGA	6	-	150251337-150251386	6q25.1a	Homo sapiens retinoic acid early transcript 1E (RAET1E), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15240696] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15240696] [evidence IC ]	RAET1E2; MGC125309; MGC125308; ULBP4; LETAL; bA350J20.7	MGC125309; bA350J20.7; RAET1E2; MGC125308; ULBP4; LETAL
Homo sapiens	RefSeq	NM_139165.1	ILMN_10488	RAET1E	NM_139165.1	NM_139165.1		135250	21040248	NM_139165.1	RAET1E	NP_631904.1	ILMN_1680712	0002370253	S	337	ACGCTGGGAGAAGTGGGGCGAGACCTCAGGATGCTCCTTTGTGACATCAA	6	-	150252733-150252782	6q25.1a	Homo sapiens retinoic acid early transcript 1E (RAET1E), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15240696] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules [goid 42612] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15240696] [evidence IC ]	RAET1E2; MGC125309; MGC125308; ULBP4; LETAL; bA350J20.7	MGC125309; bA350J20.7; RAET1E2; MGC125308; ULBP4; LETAL
Homo sapiens	RefSeq	NM_022068.1	ILMN_10543	FAM38B	NM_022068.1	NM_022068.1		63895	13384601	NM_022068.1	FAM38B	NP_071351.1	ILMN_1665686	0002510753	S	1978	GAAAGATGCCTGTGTTTTCCTCTGTGGGGCCCGTGCACTTCCTGGAGAGA	18	-	10661147-10661196	18p11.22a	Homo sapiens family with sequence similarity 38, member B (FAM38B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HsT748; FLJ23144; FLJ23403	HsT748; FLJ23144; FLJ23403
Homo sapiens	RefSeq	NM_178859.2	ILMN_30037	OSTBETA	NM_178859.2	NM_178859.2		123264	31341260	NM_178859.2	OSTbeta	NP_849190.1	ILMN_1750312	0005080279	S	146	CCATCCTTGCCCTGGCAGCTGTGGTGGTCATTATAAGCATGGTCCTCCTG	15	+	63130924-63130973	15q22.31b	Homo sapiens organic solute transporter beta (OSTbeta), mRNA.				FLJ26090; MGC118960; MGC118961; MGC118959	FLJ26090; MGC118960; MGC118961; MGC118959
Homo sapiens	RefSeq	NM_003893.3	ILMN_174111	LDB1	NM_003893.3	NM_003893.3		8861	39725686	NM_003893.3	LDB1	NP_003884.1	ILMN_1811347	0002140148	S	1946	TCTACAGAGCCTTTTAGGGGGAGGGGGTACTCATGTGGATGCCTACTTGG	10	-	103857595-103857644	10q24.32a	Homo sapiens LIM domain binding 1 (LDB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence ISS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 12792813] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte differentiation [goid 45647] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 10767331] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence ISS]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9391090] [evidence TAS]; Interacting selectively with a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions [goid 30274] [pmid 12792813] [evidence IPI]; Interacting selectively with a LIM domain (for Lin-11 Isl-1 Mec-3) of a protein, a domain with seven conserved cysteine residues and a histidine, that binds two zinc ions and acts as an interface for protein-protein interactions [goid 30274] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]	CLIM2; NLI	CLIM2; NLI
Homo sapiens	RefSeq	NM_018684.1	ILMN_19438	ZC4H2	NM_018684.1	NM_018684.1		55906	8923719	NM_018684.1	ZC4H2	NP_061154.1	ILMN_1752088	0000130154	S	1880	CAGGTTTCCTGGTAAGGTCACTCGAAGATAAGGGATGGGGATGGGGGCTG	X	-	64136487-64136536	Xq11.1c	Homo sapiens zinc finger, C4H2 domain containing (ZC4H2), mRNA.				HCA127	HCA127
Homo sapiens	RefSeq	NM_018684.1	ILMN_19438	ZC4H2	NM_018684.1	NM_018684.1		55906	8923719	NM_018684.1	ZC4H2	NP_061154.1	ILMN_3248906	0006760280	S	1555	GCTTCCTTAGGCTGAGAGTGCCCCCAGGCTGACATCTGTGTTGGCTTTTG	X	-	64136812-64136861	Xq11.1c	Homo sapiens zinc finger, C4H2 domain containing (ZC4H2), mRNA.				HCA127	HCA127
Homo sapiens	RefSeq	NM_138734.1	ILMN_25233	NRXN2	NM_138734.1	NM_138734.1		9379	21166381	NM_138734.1	NRXN2	NP_620063.1	ILMN_1763047	0000450563	I	671	TCCTCCAGCCTCAGCACCACCCACCACGTCCACCACTTCCACAGCAAGCA	11	-	64410067-64410116	11q13.1b	Homo sapiens neurexin 2 (NRXN2), transcript variant beta, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ40892; KIAA0921	FLJ40892; KIAA0921
Homo sapiens	RefSeq	NM_015080.2	ILMN_25233	NRXN2	NM_138734.1	NM_138734.1		9379	21166381	NM_138734.1	NRXN2	NP_620063.1	ILMN_1738684	0003360678	A	3374	AGGCATTGTCCACAGACTGCTGGGGTCACTTCTTTGCCCACGGGCTCCCT	11	-	64373756-64373805	11q13.1b	Homo sapiens neurexin 2 (NRXN2), transcript variant beta, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ40892; KIAA0921	FLJ40892; KIAA0921
Homo sapiens	RefSeq	NM_000254.1	ILMN_23657	MTR	NM_000254.1	NM_000254.1		4548	4557764	NM_000254.1	MTR	NP_000245.1	ILMN_1670801	0004670711	S	6890	TACCCACAGAAGGAGGAAGTGGAAGGGACAGGAGCACATAGGTAGATGCC	1	+	235130373-235130422	1q43a	Homo sapiens 5-methyltetrahydrofolate-homocysteine methyltransferase (MTR), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8968737] [evidence EXP]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8968737] [evidence TAS]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 9086] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Catalysis of the reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate [goid 4156] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: 5-methyltetrahydrofolate + L-homocysteine = tetrahydrofolate + L-methionine [goid 8705] [evidence IEA]; Catalysis of the reaction: 5-methyltetrahydrofolate + L-homocysteine = tetrahydrofolate + L-methionine [goid 8705] [pmid 8968737] [evidence EXP]; Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine [goid 8898] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom [goid 31419] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]	FLJ45386	FLJ45386
Homo sapiens	RefSeq	NM_020868.2	ILMN_24580	DPP10	NM_020868.2	NM_020868.2		57628	52426755	NM_020868.2	DPP10	NP_065919.2	ILMN_1805039	0004010093	I	436	GCACTGTCCAGGGTCCTGAAACATGAACCAAACTGCCAGCGTGTCCCATC	2	+	114916804-114916825:114916826-114916853	2q14.1a-q14.1c	Homo sapiens dipeptidyl-peptidase 10 (DPP10), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 12662155] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [pmid 12662155] [evidence IDA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	DPRP3; DPL2; DPPY	DPL2; DPRP3; DPPY
Homo sapiens	RefSeq	NM_013387.3	ILMN_1537	UCRC	NM_013387.3	NM_013387.3		29796	51173874	NM_013387.3	UCRC	NP_037519.2	ILMN_2366714	0006380563	A	440	GCCCTTGAGACCTGCTTCTACATTGGTTGCTTTGTTAACTCTACCTGATC	22	+	28495926-28495975	22q12.2a	Homo sapiens ubiquinol-cytochrome c reductase complex (7.2 kD) (UCRC), transcript variant 1, mRNA.				HSPC151; HSPC051; HSPC119	HSPC151; HSPC051; HSPC119
Homo sapiens	RefSeq	NM_013387.3	ILMN_1537	UCRC	NM_013387.3	NM_013387.3		29796	51173874	NM_013387.3	UCRC	NP_037519.2	ILMN_2366710	0007550768	A	750	CCTAGGGTATAGTTCAGGGGTATCCAATCCTTTGGCTTCCCTGGGCCATG	22	+	28496236-28496285	22q12.2a	Homo sapiens ubiquinol-cytochrome c reductase complex (7.2 kD) (UCRC), transcript variant 1, mRNA.				HSPC151; HSPC051; HSPC119	HSPC151; HSPC051; HSPC119
Homo sapiens	RefSeq	NM_001553.1	ILMN_894	IGFBP7	NM_001553.1	NM_001553.1		3490	4504618	NM_001553.1	IGFBP7	NP_001544.1	ILMN_2062468	0003400538	S	622	CTATGGAGTTCAAAGGACAGAACTCCTGCCTGGTGACCGGGACAACCTGG	4	-	57899413-57899462	4q12e	Homo sapiens insulin-like growth factor binding protein 7 (IGFBP7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8939990] [evidence TAS]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	MAC25; IGFBP-7; IGFBP-7v; PSF; FSTL2	MAC25; IGFBP-7; IGFBP-7v; PSF; FSTL2
Homo sapiens	RefSeq	NM_152634.2	ILMN_306805	TCEANC	NM_152634.2	NM_152634.2		170082	154146186	NM_152634.2	TCEANC	NP_689847.2	ILMN_3243621	0004200280	S	1809	CATCTGGGAAGCTTTGAAAACCCACTGGTGCTGAGACCCCACCCTAGAAC	X	+	13592022-13592071	Xp22.2	Homo sapiens transcription elongation factor A (SII) N-terminal and central domain containing (TCEANC), mRNA.				MGC17403	MGC17403
Homo sapiens	RefSeq	XR_015614.2	ILMN_183179	LOC729217	XR_015614.2	XR_015614.2		729217	169210495	XR_015614.2	LOC729217		ILMN_3229467	0006380259	A	420	CGTGTGCGAGATGTATGGCTGCTGGATGACCTTCCTCCCAGAGTGGCTCA				16q21d	PREDICTED: Homo sapiens misc_RNA (LOC729217), miscRNA.					
Homo sapiens	RefSeq	NM_152901.1	ILMN_11343	PYDC1	NM_152901.2	NM_152901.2		260434	142380001	NM_152901.2	PYDC1	NP_690865.1	ILMN_1694823	0002470292	S	330	GAGCTGGAGGCGGGTCAAGGCAAAAGGAGTAATGCAACGCCTGTGAAGCC	16	-	31227434-31227478:31228064-31228068	16p11.2c	Homo sapiens PYD (pyrin domain) containing 1 (PYDC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12656673] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12656673] [evidence IDA]; A protein serine/threonine kinase that phosphorylates IkappaB, thereby targeting this for proteasomal degradation and allowing the nuclear translocation of kB. Composed of alpha, beta and gamma subunits, the latter not having kinase activity but presumed to play a regulatory role [goid 8385] [pmid 12656673] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [pmid 12656673] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [pmid 12656673] [evidence IDA]; A series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor [goid 33209] [pmid 12656673] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 12656673] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [pmid 12656673] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12656673] [evidence IPI]	PYC1; ASC2; POP1	PYC1; ASC2; POP1
Homo sapiens	RefSeq	NM_001013845.1	ILMN_12545	CXORF40B	NM_001013845.1	NM_001013845.1		541578	62241037	NM_001013845.1	CXorf40B	NP_001013867.1	ILMN_1733654	0005890259	S	217	GACTGTACTCTGAGGCCAAAAGCCAGAGTCGGCCCTGAACGCCCACGACT	X	-	149106450-149106499	Xq28b	Homo sapiens chromosome X open reading frame 40B (CXorf40B), mRNA.					
Homo sapiens	RefSeq	NM_001102663.1	ILMN_352224	NBPF16	NM_001102663.1	NM_001102663.1		728936	157266284	NM_001102663.1	NBPF16	NP_001096133.1	ILMN_3242753	0007040639	S	275	GGCAGAGAAGAAACAGCAGTTCAGAAACCTCAAAGAGAAATGTTTTCTAA	1	+	147006442-147006491	1q21.1e	Homo sapiens neuroblastoma breakpoint family, member 16 (NBPF16), mRNA. XM_001133181 XM_001133185 XM_001133188 XM_001133191	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			AG3	AG3
Homo sapiens	RefSeq	NM_003578.3	ILMN_3634	SOAT2	NM_003578.3	NM_003578.3		8435	125988401	NM_003578.3	SOAT2	NP_003569.1	ILMN_2058270	0006100747	S	1814	GCAGACTTGTGGGTAACTGATCACAGACCTCAGCATGGGGGTGACCAGGG	12	+	51804331-51804380	12q13.13e	Homo sapiens sterol O-acyltransferase 2 (SOAT2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 9756920] [evidence TAS]	Catalysis of the reaction: acyl-CoA + a sterol = CoA + a sterol ester [goid 4772] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [pmid 9756920] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ACAT2; MGC116732; ACACT2; ARGP2	ACAT2; MGC116732; ACACT2; ARGP2
Homo sapiens	RefSeq	XM_001725700.1	ILMN_350365	LOC729708	XM_001725700.1	XM_001725700.1		729708	169160692	XM_001725700.1	LOC729708	XP_001725752.1	ILMN_3305475	0007400193	M	1201	GTGAACCACCCACGTGAGGGAATAAACCTGGCACTAGGTCTTGTGAAAAA				1p31.1f	PREDICTED: Homo sapiens similar to rcTPI1, transcript variant 1 (LOC729708), mRNA.					
Homo sapiens	RefSeq	NM_001099334.2	ILMN_364910	C2ORF80	NM_001099334.2	NM_001099334.2		389073	188528690	NM_001099334.2	C2orf80	NP_001092804.1	ILMN_3240957	0005570671	S	1060	AATGTGTGGCATTGAATATTGCACAGTGATGGAGTGGGAGGCAGATTTCC	2	-	209030175-209030224	2q33.3d	Homo sapiens chromosome 2 open reading frame 80 (C2orf80), mRNA.					
Homo sapiens	RefSeq	NM_025026.1	ILMN_172522	FLJ14107	XR_017962.1	XR_017962.1		80094	113420300	XR_017962.1	FLJ14107		ILMN_1811608	0007050154	S	1503	ACACTCAGCACCCCTCCCAAAGAGCGCCCCCTGTGTGTTCTGGATCTCTA				8p21.3a	PREDICTED: Homo sapiens hypothetical protein FLJ14107 (FLJ14107), misc RNA.					
Homo sapiens	RefSeq	NM_024057.2	ILMN_4147	NUP37	NM_024057.2	NM_024057.2		79023	34222120	NM_024057.2	NUP37	NP_076962.2	ILMN_1771903	0003890544	S	967	GACTGTCCTGGCATCGAACTCTCCCTCTGTGTGTAATTGGAGGAGACCAC	12	-	102468161-102468210	12q23.2a	Homo sapiens nucleoporin 37kDa (NUP37), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 12228227] [evidence EXP]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		MGC5585; p37; FLJ22618	MGC5585; p37; FLJ22618
Homo sapiens	RefSeq	NM_014183.2	ILMN_6713	DYNLRB1	NM_014183.2	NM_014183.2		83658	29570778	NM_014183.2	DYNLRB1	NP_054902.1	ILMN_2157435	0000130603	S	434	CATGGCAGTCGCTTGGAACCCACTCACACCAATCCAGTGACCGTGTGTGG	20	+	32592172-32592221	20q11.22a	Homo sapiens dynein, light chain, roadblock-type 1 (DYNLRB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [pmid 11750132] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [pmid 11750132] [evidence NAS]; The actions or reactions of an organism in response to a visual stimulus [goid 7632] [evidence ISS]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 11750132] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12077152] [evidence NAS]	BLP; ROBLD1; BITH; DNLC2A; DNCL2A	BLP; ROBLD1; BITH; DNLC2A; DNCL2A
Homo sapiens	RefSeq	NM_014183.2	ILMN_6713	DYNLRB1	NM_014183.2	NM_014183.2		83658	29570778	NM_014183.2	DYNLRB1	NP_054902.1	ILMN_1658053	0007210224	S	61	ATGGCAGAGGTGGAGGAGACACTGAAGCGACTGCAGAGCCAGAAGGGAGT	20	+	32567925-32567927:32577734-32577780	20q11.22a	Homo sapiens dynein, light chain, roadblock-type 1 (DYNLRB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [pmid 11750132] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [pmid 11750132] [evidence NAS]; The actions or reactions of an organism in response to a visual stimulus [goid 7632] [evidence ISS]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 11750132] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12077152] [evidence NAS]	BLP; ROBLD1; BITH; DNLC2A; DNCL2A	BLP; ROBLD1; BITH; DNLC2A; DNCL2A
Homo sapiens	RefSeq	NM_177953.1	ILMN_6713	DYNLRB1	NM_014183.2	NM_014183.2		83658	29570778	NM_014183.2	DYNLRB1	NP_054902.1	ILMN_1703564	0004780047	I	385	TTTAATGCCCCCCAAGAATGTTAATGTCAATCATGTCAGTGGACTAGCAC	20	+	32592123-32592172	20q11.22a	Homo sapiens dynein, light chain, roadblock-type 1 (DYNLRB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [pmid 11750132] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [pmid 11750132] [evidence NAS]; The actions or reactions of an organism in response to a visual stimulus [goid 7632] [evidence ISS]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 11750132] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12077152] [evidence NAS]	BLP; ROBLD1; BITH; DNLC2A; DNCL2A	BLP; MGC15113; HSPC162; BITH; DNLC2A
Homo sapiens	RefSeq	NM_177953.1	ILMN_6713	DYNLRB1	NM_014183.2	NM_014183.2		83658	29570778	NM_014183.2	DYNLRB1	NP_054902.1	ILMN_1766762	0006580369	A	4	AGAAAGGCACAGGACTCGCTAAGTGTTCGCTACGCGGGGCTACCGGATCG	20	+	32567868-32567917	20q11.22a	Homo sapiens dynein, light chain, roadblock-type 1 (DYNLRB1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [pmid 11750132] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [pmid 11750132] [evidence NAS]; The actions or reactions of an organism in response to a visual stimulus [goid 7632] [evidence ISS]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 11750132] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12077152] [evidence NAS]	BLP; ROBLD1; BITH; DNLC2A; DNCL2A	BLP; MGC15113; HSPC162; BITH; DNLC2A
Homo sapiens	RefSeq	NM_002835.2	ILMN_26144	PTPN12	NM_002835.2	NM_002835.2		5782	18375651	NM_002835.2	PTPN12	NP_002826.2	ILMN_1695509	0003990136	S	2334	CCCAAAGGACCAAGAGATCCACCTTCAGAATGGACATGATTCAGGGAGCT	7	+	77106495-77106533:77106534-77106544	7q11.23g	Homo sapiens protein tyrosine phosphatase, non-receptor type 12 (PTPN12), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1472029] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1472029] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 8454633] [evidence TAS]	 [goid 4726] [pmid 8454633] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 9285683] [evidence IPI]	PTPG1; PTP-PEST	PTPG1; PTP-PEST
Homo sapiens	RefSeq	NM_002835.2	ILMN_26144	PTPN12	NM_002835.2	NM_002835.2		5782	18375651	NM_002835.2	PTPN12	NP_002826.2	ILMN_2222074	0003140364	S	2858	AAACTTGCTGGATTCATGCAGCCAGCTTTGCAGGTTATCAGAGATCAAAG	7	+	77107019-77107068	7q11.23g	Homo sapiens protein tyrosine phosphatase, non-receptor type 12 (PTPN12), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1472029] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1472029] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 8454633] [evidence TAS]	 [goid 4726] [pmid 8454633] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 9285683] [evidence IPI]	PTPG1; PTP-PEST	PTPG1; PTP-PEST
Homo sapiens	Unigene	Hs.549460	ILMN_110004	HS.549460	Hs.549460		Hs.549460		13727946	BG206259			ILMN_1892582	0005570619	S	68	GGCTACAGCTCTGCAATCAAGATATCAGCAAGGCCATCATTCCACTAAGG	11	-	97318852-97318901		RST25702 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_014903.3	ILMN_181505	NAV3	NM_014903.4	NM_014903.4		89795	120953250	NM_014903.4	NAV3	NP_055718.4	ILMN_1714600	0000360270	S	9085	GGACGTGTATTTGGTGCTACTCTCTGTGACCACCAATGGGTCAGTTGCTA	12	+	77130248-77130297	12q21.2b	Homo sapiens neuron navigator 3 (NAV3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	unc53H3; STEERIN3; POMFIL1; KIAA0938	unc53H3; STEERIN3; POMFIL1; KIAA0938
Homo sapiens	RefSeq	NM_012317.2	ILMN_8953	LDOC1	NM_012317.2	NM_012317.2		23641	22035627	NM_012317.2	LDOC1	NP_036449.1	ILMN_1788250	0001400484	S	973	CCACATCCCACCTACAGACTACCACCTTTCGAGATCAGGACCAACCTGGA	X	-	140270288-140270337	Xq27.1d	Homo sapiens leucine zipper, down-regulated in cancer 1 (LDOC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10403563] [evidence TAS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10403563] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	Mart7; Mar7; BCUR1	Mar7; Mart7; BCUR1
Homo sapiens	RefSeq	NM_018706.4	ILMN_23823	DHTKD1	NM_018706.5	NM_018706.5		55526	145275211	NM_018706.5	DHTKD1	NP_061176.3	ILMN_1664369	0006250075	S	4824	TTTCTCTGAAGTGGTGTGGGAAGTACCAGGGGACTGGCAGAAGCCCAGGC	10	+	12164599-12164648	10p14a	Homo sapiens dehydrogenase E1 and transketolase domain containing 1 (DHTKD1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2-oxoglutarate + lipoamide = S-succinyldihydrolipoamide + CO2 [goid 4591] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]	DKFZP762M115; KIAA1630; MGC3090	MGC3090; DKFZP762M115; KIAA1630
Homo sapiens	RefSeq	NM_013955.1	ILMN_6365	NOX1	NM_013955.1	NM_013955.1		27035	7669509	NM_013955.1	NOX1	NP_039249.1	ILMN_2319664	0004180743	A	330	GCCGCACACTGAGAAAGCAATTGGATCACAACCTCACCTTCCACAAGCTG	X	-	100004831-100004880	Xq22.1c	Homo sapiens NADPH oxidase 1 (NOX1), transcript variant NOH-1Lv, mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 17673675] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A enzyme complex of which the core is a heterodimer composed of a light (alpha) and heavy (beta) chain, and requires several other water-soluble proteins of cytosolic origin for activity. Functions in superoxide generation by the NADPH-dependent reduction of O2 [goid 43020] [pmid 16636067] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 11805326] [evidence IMP]; The chemical reactions and pathways involving nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; metabolism may be of either the oxidized form, NADP, or the reduced form, NADPH [goid 6739] [pmid 10485709] [evidence IC ]; The chemical reactions and pathways involving the reduced form of flavin-adenine dinucleotide [goid 6746] [evidence NAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10615049] [evidence IDA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 18347018] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 17673675] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 18347018] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus [goid 9268] [pmid 10615049] [evidence IDA]; Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor [goid 10575] [pmid 11805326] [evidence IEP]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 10615049] [evidence IDA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 18023288] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [evidence IEA]; The enzymatic generation of superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species, by a cell in response to environmental stress, thereby mediating the activation of various stress-inducible signaling pathways [goid 42554] [pmid 10485709] [evidence IDA]; The chemical reactions and pathways involving hydrogen peroxide (H2O2), a potentially harmful byproduct of aerobic cellular respiration which can cause damage to DNA [goid 42743] [pmid 11331784] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of integrins [goid 45726] [pmid 18023288] [evidence IMP]; A phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 45730] [pmid 16636067] [evidence TAS]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [pmid 10485709] [evidence ISS]; Any process that increases the internal pH of a cell, measured by the concentration of the hydrogen ion [goid 51454] [pmid 10615049] [evidence IDA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16636067] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [evidence IEA]; Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2- [goid 16175] [pmid 10485709] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transmembrane transfer of a proton by a voltage-gated channel [goid 30171] [pmid 10615049] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with Rac protein, any member of the Rac subfamily of the Ras superfamily of monomeric GTPases [goid 48365] [pmid 16636067] [evidence IPI]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 10485709] [evidence IC ]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MOX1; NOH1; NOH-1; GP91-2	MOX1; NOH1; NOH-1; GP91-2
Homo sapiens	RefSeq	NM_015442.1	ILMN_698	CNOT10	NM_015442.1	NM_015442.1		25904	13123771	NM_015442.1	CNOT10	NP_056257.1	ILMN_2078334	0001300463	S	2289	GCCCCCTGAGGCCATCTTGCTGGCAGTCTACCTTGAACTGCAGAATGGTA	3	+	32751307-32751356	3p22.3c	Homo sapiens CCR4-NOT transcription complex, subunit 10 (CNOT10), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZP434K115; FLJ12890; FLJ13165	FLJ12890; DKFZP434K115; FLJ13165
Homo sapiens	RefSeq	NM_005013.1	ILMN_23510	NUCB2	NM_005013.2	NM_005013.2		4925	116063564	NM_005013.2	NUCB2	NP_005004.1	ILMN_1655913	0000060427	S	1385	TCAACTGGAGGCTCAGAAGCTGGAATATCATCAGGTCATACAGCAGATGG	11	+	17304383-17304432	11p15.1d	Homo sapiens nucleobindin 2 (NUCB2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7811391] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7811391] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7811391] [evidence TAS]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7811391] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 7811391] [evidence TAS]	NEFA	NEFA
Homo sapiens	RefSeq	NM_018290.2	ILMN_6226	PGM2	NM_018290.2	NM_018290.2		55276	63055048	NM_018290.2	PGM2	NP_060760.2	ILMN_1673543	0004830504	S	2816	GGTCTTACAGCCTTCCAAAATAACTCCAGTTGGGCACCCATGAGCTAGGA	4	+	37540592-37540641	4p14d	Homo sapiens phosphoglucomutase 2 (PGM2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate [goid 4614] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MSTP006; FLJ10983	MSTP006; FLJ10983
Homo sapiens	RefSeq	NM_025090.2	ILMN_23872	USP36	NM_025090.2	NM_025090.2		57602	35250685	NM_025090.2	USP36	NP_079366.2	ILMN_1697227	0007160612	S	5726	CAGAGCTTGGGGCTTTCTGGCTGCTCTTCATTGACCTGTGTGTTCCCAGC	17	-	74295253-74295302	17q25.3b	Homo sapiens ubiquitin specific peptidase 36 (USP36), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]	DUB1	DUB1
Homo sapiens	RefSeq	NM_030593.1	ILMN_21853	SIRT2	NM_012237.2	NM_012237.2		22933	13775599	NM_012237.2	SIRT2	NP_036369.2	ILMN_1723494	0004860411	A	1656	ACGGGGCCAGGGCTACCCCAGAACTTTTAACTCTTCCAGGACAGGGAGCT	19	-	44061299-44061348	19q13.2a	Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 2 (S. cerevisiae) (SIRT2), transcript variant 1, mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [pmid 12697818] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12697818] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 12620231] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence ISS]	Repression of transcription of ribosomal DNA by the formation of heterochromatin [goid 183] [pmid 11427894] [evidence NAS]; Repression of transcription of telomeric DNA by the formation of heterochromatin [goid 6348] [pmid 11427894] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 10381378] [evidence NAS];  [goid 6980] [pmid 12887892] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [pmid 12697818] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12887892] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; The modification of histones by removal of acetyl groups [goid 16575] [pmid 12697818] [evidence TAS]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [pmid 12697818] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12887892] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence ISS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12887892] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15126506] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 21320922] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [pmid 12697818] [evidence IDA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence ISS]; Interacting selectively with the enzyme histone acetyltransferase [goid 35035] [pmid 12887892] [evidence IPI]; Interacting selectively with the enzyme histone acetyltransferase [goid 35035] [evidence ISS]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [pmid 12620231] [evidence IPI]; Interacting selectively with the enzyme histone deacetylase [goid 42826] [evidence ISS]; Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate [goid 42903] [pmid 12620231] [evidence IDA]; Catalysis of the reaction: N-acetyl(alpha-tubulin) + H2O = alpha-tubulin + acetate [goid 42903] [evidence ISS]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [evidence ISS]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [pmid 12697818] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	SIR2L2; SIR2L; SIR2	SIR2L2; SIR2L; SIR2
Homo sapiens	RefSeq	XM_939151.1	ILMN_32158	LOC650062	XM_939151.1	XM_939151.1		650062	89042822	XM_939151.1	LOC650062	XP_944244.1	ILMN_1696723	0002680068	S	285	CAAGCATCTCGACAACGTTTTGCAGGGAAAACACTTCCACAACCATCAGG					PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC650062), mRNA.					
Homo sapiens	RefSeq	NM_001149.2	ILMN_2714	ANK3	NM_001149.2	NM_001149.2		288	32967598	NM_001149.2	ANK3	NP_001140.2	ILMN_2390609	0001850709	A	4819	GATGTAGACACCTTTCAGTAAGCCAATCATTTGTAACCATTCTAGCAGTG	10	-	61788362-61788411	10q21.2a	Homo sapiens ankyrin 3, node of Ranvier (ankyrin G) (ANK3), transcript variant 2, mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8666667] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 8666667] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 7836469] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 7836469] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15823567] [evidence IPI]	ANKYRIN-G; FLJ45464	ANKYRIN-G; FLJ45464
Homo sapiens	RefSeq	NM_001149.2	ILMN_2714	ANK3	NM_001149.2	NM_001149.2		288	32967598	NM_001149.2	ANK3	NP_001140.2	ILMN_1661875	0001450672	I	2888	CTCCCCTTAGAACCCCTAGTAGACTGAGTGATGGGCTAGTGCCTTCCCAG	10	-	61819606-61819655	10q21.2a	Homo sapiens ankyrin 3, node of Ranvier (ankyrin G) (ANK3), transcript variant 2, mRNA.	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 8666667] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 8666667] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 7836469] [evidence TAS]; The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [pmid 7836469] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15823567] [evidence IPI]	ANKYRIN-G; FLJ45464	ANKYRIN-G; FLJ45464
Homo sapiens	RefSeq	NM_000482.3	ILMN_165411	APOA4	NM_000482.3	NM_000482.3		337	71773109	NM_000482.3	APOA4	NP_000473.2	ILMN_1675706	0003780468	S	1113	GAAGGCCACTTGAGCTTCCTGGAGAAGGACCTGAGGGACAAGGTCAACTC	11	-	116691715-116691764	11q23.3b	Homo sapiens apolipoprotein A-IV (APOA4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 4345202] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12692552] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1935934] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [pmid 12692552] [evidence EXP]; A triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm. It is found in blood and transports endogenous products (newly synthesized cholesterol and triglycerides) from the liver [goid 34361] [pmid 3095477] [evidence IDA]; A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process [goid 34364] [pmid 3095477] [evidence IDA]; A large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE. Chylomicrons are found in blood or lymph and carry lipids from the intestines into other body tissues [goid 42627] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; Any process of the innate immune response that takes place in the mucosal tissues [goid 2227] [pmid 15254593] [evidence IDA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid hydroperoxide stimulus. Lipid hydroperoxide is the highly reactive primary oxygenated products of polyunsaturated fatty acids [goid 6982] [pmid 16945374] [evidence IDA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 15254593] [evidence IDA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 1935934] [evidence IDA]; Any process involved in removing superoxide radicals (O2-) from a cell or organism, e.g. by conversion to dioxygen (O2) and hydrogen peroxide (H2O2) [goid 19430] [pmid 16945374] [evidence IDA]; Any process that modulates the frequency, rate or extent of the directed movement of cholesterol into, out of, within or between cells [goid 32374] [pmid 11940599] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [pmid 11162594] [evidence IDA]; The directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle [goid 33344] [pmid 1935934] [evidence IDA]; The directed movement of a phospholipid out of a cell or organelle [goid 33700] [pmid 11162594] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate or extent of lipoprotein oxidation, occurring in the blood plasma [goid 34445] [pmid 16945374] [evidence IDA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 1935934] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [pmid 16945374] [evidence IDA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [pmid 3095477] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of lipids, occurring at the tissue, organ, or organismal level of a multicellular organism [goid 44240] [pmid 3095477] [evidence IDA]; The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes [goid 46470] [pmid 1935934] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [pmid 3095477] [evidence IDA]; The aggregation, arrangement and bonding together of proteins and lipids to form a protein-lipid complex [goid 65005] [pmid 16159879] [evidence IMP]	Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [pmid 3080432] [evidence TAS]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 16945374] [evidence IDA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage [goid 16209] [pmid 16945374] [evidence IDA]; Enables the directed movement of cholesterol into, out of, within or between cells. Cholesterol is the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 17127] [pmid 1935934] [evidence IDA]; Interacting selectively with phosphatidylcholine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of choline [goid 31210] [pmid 11940599] [evidence IDA]; Interacting selectively with phosphatidylcholine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of choline [goid 31210] [pmid 1935934] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 1935934] [evidence IDA]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [pmid 1935934] [evidence IDA]; Increases the activity of phosphatidylcholine-sterol O-acyltransferase, an enzyme that converts cholesterol and phosphatidylcholine (lecithins) to cholesteryl esters and lyso-phosphatidylcholines [goid 60228] [pmid 1935934] [evidence IDA]	MGC142154; MGC142156	MGC142154; MGC142156
Homo sapiens	RefSeq	NM_078467.1	ILMN_164030	CDKN1A	NM_078467.1	NM_078467.1		1026	17978494	NM_078467.1	CDKN1A	NP_510867.1	ILMN_1787212	0005290475	I	179	GAGGATGCGTGTTCGCGGGTGTGTGCTGCGTTCACAGGTGTTTCTGCGGC	6	+	36646665-36646714	6p21.31a	Homo sapiens cyclin-dependent kinase inhibitor 1A (p21, Cip1) (CDKN1A), transcript variant 2, mRNA.	Cyclin-dependent protein kinases (CDKs) are heterodimeric enzymes that contain a kinase catalytic subunit associated with a regulatory cyclin partner [goid 307] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16782892] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9190208] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9632134] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9840943] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11231585] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10323868] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9632134] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9106657] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 10208428] [evidence IDA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 17553787] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [pmid 9660939] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 10208428] [evidence IDA]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [pmid 17553787] [evidence IMP]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of non-apoptotic programmed cell death, cell death resulting from activation of endogenous cellular processes, by a mechanism other than apoptosis [goid 43071] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 17420273] [evidence IMP]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 10323868] [evidence EXP]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 8242751] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with cyclins, proteins whose levels in a cell varies markedly during the cell cycle, rising steadily until mitosis, then falling abruptly to zero. As cyclins reach a threshold level, they are thought to drive cells into G2 phase and thus to mitosis [goid 30332] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P21; MDA-6; SDI1; p21CIP1; CIP1; CDKN1; WAF1; CAP20	P21; MDA-6; SDI1; p21CIP1; CIP1; CDKN1; WAF1; CAP20
Homo sapiens	RefSeq	NM_004974.2	ILMN_165221	KCNA2	NM_004974.2	NM_004974.2		3737	25952079	NM_004974.2	KCNA2	NP_004965.1	ILMN_1792125	0000830240	S	1797	GCTGTCCAAAGATCCCATCCTCCCCTGACCTAAAGAAAAGTAGAAGTGCC	1	-	111146054-111146103	1p13.3a	Homo sapiens potassium voltage-gated channel, shaker-related subfamily, member 2 (KCNA2), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 2251283] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 2251283] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 1715584] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	HBK5; RBK2; MK2; MGC50217; HK4; KV1.2; NGK1; HUKIV	HBK5; RBK2; MK2; MGC50217; HK4; KV1.2; NGK1; HUKIV
Homo sapiens	RefSeq	NM_005381.2	ILMN_167467	NCL	NM_005381.2	NM_005381.2		4691	55956787	NM_005381.2	NCL	NP_005372.2	ILMN_2121437	0002600035	S	2314	GGACTCTGGGGTTTTTACTGTTACCTGATCAATGACAGAGCCTTCTGAGG	2	-	232319812-232319861	2q37.1b	Homo sapiens nucleolin (NCL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 12944467] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [pmid 16403913] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 16403913] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 2737305] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 16403913] [evidence IPI]	FLJ45706; C23	FLJ45706; C23
Homo sapiens	RefSeq	XM_001723814.1	ILMN_340270	LOC100129685	XM_001723814.1	XM_001723814.1		100129685	169211212	XM_001723814.1	LOC100129685	XP_001723866.1	ILMN_3259223	0007560215	M	1	GAGAGGAAGGGGTTTCCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCG				17p13.3a	PREDICTED: Homo sapiens hypothetical protein LOC100129685 (LOC100129685), mRNA.					
Homo sapiens	RefSeq	XM_001723814.1	ILMN_340270	LOC100129685	XM_001723814.1	XM_001723814.1		100129685	169211212	XM_001723814.1	LOC100129685	XP_001723866.1	ILMN_3182762	0006620730	A	337	GCACATAAAGCACTCTAAGAGCCGAGATAGCTTCCTGGAACGCGTGAAGG				17p13.3a	PREDICTED: Homo sapiens hypothetical protein LOC100129685 (LOC100129685), mRNA.					
Homo sapiens	RefSeq	NM_001097.1	ILMN_27736	ACR	NM_001097.2	NM_001097.2		49	148613877	NM_001097.2	ACR	NP_001088.2	ILMN_1705637	0006900576	S	973	TCTGCTCACCTTCCTTGGTATTTCCAACCGCCCCCTCGACCACTTCCACC	22	+	49530196-49530245	22q13.33b	Homo sapiens acrosin (ACR), mRNA.	A structural framework, or 'dense core' at the interior of an acrosome. May regulate the distribution of hydrolases within the acrosome and their release during the acrosome reaction [goid 43159] [pmid 12398221] [evidence TAS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 7521127] [evidence IDA]	The proteolytic digestion of components in the acrosomal matrix that allows for their release into the egg. The dispersal of the components allows for the inner acrosomal membrane to interact with the egg [goid 2077] [pmid 10418103] [evidence NAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 3880736] [evidence IDA]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [pmid 10369396] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1937464] [evidence NAS]; Catalysis of the reaction: a monocarboxylic acid amide + H2O = a monocarboxylate + NH3 [goid 4040] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 6802470] [evidence IDA]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 6815104] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15950651] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15950651] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7521127] [evidence IPI]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [pmid 15950652] [evidence IDA]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 6815104] [evidence NAS]; Interacting selectively with fucose, the pentose 6-deoxygalactose [goid 42806] [evidence ISS]		
Homo sapiens	RefSeq	XM_001720491.1	ILMN_341852	LOC729284	XM_001720491.1	XM_001720491.1		729284	169172777	XM_001720491.1	LOC729284	XP_001720543.1	ILMN_3241123	0007610270	S	19	GCTGCAGCAGCCCGGCTGGAAGCGATGCAGCATCCAGGACGACGGAGGAA	8	-	7138827-7138876	8p23.1f	PREDICTED: Homo sapiens hypothetical LOC729284 (LOC729284), mRNA.					
Homo sapiens	RefSeq	NM_181429.1	ILMN_13236	TAS2R42	NM_181429.1	NM_181429.1		353164	31088851	NM_181429.1	TAS2R42	NP_852094.1	ILMN_1707668	0003440187	S	664	AGAGACTCCAGCACAGAGGCCCATAGGAGGGCCATGAAAATGGTGATGTC	12	-	11338830-11338879	12p13.2b	Homo sapiens taste receptor, type 2, member 42 (TAS2R42), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	T2R55; T2R24; hT2R55	T2R55; T2R24; hT2R55
Homo sapiens	RefSeq	NM_016281.3	ILMN_24516	TAOK3	NM_016281.3	NM_016281.3		51347	148746217	NM_016281.3	TAOK3	NP_057365.3	ILMN_3307863	0003780113	S	4081	CCCCACCTCCCTCCTTTTCCAGTTCAGTATTTGGAGTTCAACACTGTCTC	12	-	118587859-118587908	12q24.23a	Homo sapiens TAO kinase 3 (TAOK3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46329] [pmid 10559204] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [pmid 10924369] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 10559204] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10559204] [evidence IDA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [pmid 10559204] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10559204] [evidence IC ]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [pmid 10559204] [evidence IDA]	JIK; FLJ31808; DPK; MAP3K18; DKFZp666H245	DPK; DKFZp666H245; JIK; MAP3K18
Homo sapiens	RefSeq	NM_001326.2	ILMN_27551	CSTF3	NM_001326.2	NM_001326.2		1479	75709185	NM_001326.2	CSTF3	NP_001317.1	ILMN_1808779	0001570754	I	2557	GTGGCAGAACCACATTTTGTTCCCTCTTCAAGGGTGTCTTGTATGTGCCG	11	-	33106737-33106786	11p13d	Homo sapiens cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa (CSTF3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7984242] [evidence TAS]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [pmid 7984242] [evidence TAS]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 7984242] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1741396] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC75122; MGC43001; MGC117398; CSTF-77	MGC75122; MGC43001; MGC117398; CSTF-77
Homo sapiens	RefSeq	NM_001076.1	ILMN_5331	UGT2B15	NM_001076.1	NM_001076.1		7366	4507818	NM_001076.1	UGT2B15	NP_001067.1	ILMN_1739624	0005860433	S	2	TCGGCACGAGTAAGACCAGGATGTCTCTGAAATGGACGTCAGTCTTTCTG	4	-	69570912-69570941:69570942-69570958:69576483-69576485	4q13.2c	Homo sapiens UDP glucuronosyltransferase 2 family, polypeptide B15 (UGT2B15), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [pmid 7835232] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 7835232] [evidence TAS]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]	UGT2B8	UGT2B8
Homo sapiens	RefSeq	XM_936253.1	ILMN_44140	LOC642113	XM_936253.1	XM_936253.1		642113	89028797	XM_936253.1	LOC642113	XP_941346.1	ILMN_1652199	0006450102	S	34	GCTTCTCTTCCTCCTGCTACTCTGGCTCCCAGATACCACCGGAGAAATTG					PREDICTED: Homo sapiens similar to Ig kappa chain V-III region HAH precursor (LOC642113), mRNA.					
Homo sapiens	RefSeq	XM_939590.1	ILMN_25882	STAP2	NM_017720.2	NM_017720.2		55620	62243733	NM_017720.2	STAP2	NP_060190.2	ILMN_1657631	0002470379	A	1116	AGTTGCCAAAGCCTCCTGCCAAGCTTCCAAAGCCACCCGTTGGACCCAAG	19	-	4325216-4325265	19p13.3d	Homo sapiens signal transducing adaptor family member 2 (STAP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16365431] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BKS; FLJ20234	
Homo sapiens	RefSeq	NM_017720.2	ILMN_25882	STAP2	NM_017720.2	NM_017720.2		55620	62243733	NM_017720.2	STAP2	NP_060190.2	ILMN_2281529	0002190445	I	1248	AAAGTGCTGGGATTACCGGCGTGAGCCACCACACCTGGCCTCATCTGTCT	19	-	4324536-4324585	19p13.3d	Homo sapiens signal transducing adaptor family member 2 (STAP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16365431] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BKS; FLJ20234	BKS; FLJ20234
Homo sapiens	RefSeq	NM_017720.2	ILMN_25882	STAP2	NM_017720.2	NM_017720.2		55620	62243733	NM_017720.2	STAP2	NP_060190.2	ILMN_2384237	0005310132	A	938	TGCACAGGTGGCCCCAAGCCGCTGTCACCTGCGTCTAGCCAGGACAAGCT	19	-	4325481-4325530	19p13.3d	Homo sapiens signal transducing adaptor family member 2 (STAP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16365431] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BKS; FLJ20234	BKS; FLJ20234
Homo sapiens	RefSeq	NM_017720.2	ILMN_25882	STAP2	NM_017720.2	NM_017720.2		55620	62243733	NM_017720.2	STAP2	NP_060190.2	ILMN_1704500	0005910753	A	1304	CCAGAGCCCAAAGTCTTTAATGGTGGCTTGGGCAGGAAGCTGCCAGTCAG	19	-	4324480-4324529	19p13.3d	Homo sapiens signal transducing adaptor family member 2 (STAP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16365431] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BKS; FLJ20234	BKS; FLJ20234
Homo sapiens	RefSeq	NM_001031666.1	ILMN_12609	MS4A3	NM_001031666.1	NM_001031666.1		932	73486650	NM_001031666.1	MS4A3	NP_001026836.1	ILMN_2374904	0003930445	A	1178	TCTGGGTTCAAATTCTGAAACTGTCACTTATTACCTGTATGAACATGGGC	11	+	59594996-59595045	11q12.1d	Homo sapiens membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific) (MS4A3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD20L; HTM4	CD20L; HTM4
Homo sapiens	RefSeq	NM_032515.3	ILMN_19886	BOK	NM_032515.3	NM_032515.3		666	34335395	NM_032515.3	BOK	NP_115904.1	ILMN_1730032	0002600072	S	2260	CCCCTCAGGTGCCCCCACACACAGCCTTCCCTTGACGCCTACATTTCTAG	2	+	242161885-242161934	2q37.3g	Homo sapiens BCL2-related ovarian killer (BOK), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9356461] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence ISS]	MGC4631; BOKL; BCL2L9	MGC4631; BOKL; BCL2L9
Homo sapiens	RefSeq	XM_942671.1	ILMN_32184	LOC651558	XM_942671.1	XM_942671.1		651558	88952647	XM_942671.1	LOC651558	XP_947764.1	ILMN_1810205	0006510291	S	246	AAAAAAGTGTGAAGGGGGAAAAGCTATGTTGTTCACATTAAAAAGAGATA					PREDICTED: Homo sapiens hypothetical protein LOC651558 (LOC651558), mRNA.					
Homo sapiens	RefSeq	XM_001717417.1	ILMN_343045	LOC100128993	XM_001717417.1	XM_001717417.1		100128993	169172441	XM_001717417.1	LOC100128993	XP_001717469.1	ILMN_3262300	0000580437	M	410	GTCTTATGGCCACAGGTGAGTGAAATAGCTTCTCTGGCCTCAGCTTCCTC				8p22a	PREDICTED: Homo sapiens similar to hCG2036572 (LOC100128993), mRNA.					
Homo sapiens	RefSeq	XR_039697.1	ILMN_346394	LOC100132918	XR_039697.1	XR_039697.1		100132918	169166031	XR_039697.1	LOC100132918		ILMN_3288830	0003130504	M	587	TGGTTATCAGTCCCACGCAGACATAGCTACTAAGAATGGCTCCACCACTG				3q26.33c	PREDICTED: Homo sapiens misc_RNA (LOC100132918), miscRNA.					
Homo sapiens	RefSeq	NM_001042430.1	ILMN_173350	FAM164C	NM_001042430.1	NM_001042430.1		79696	109452607	NM_001042430.1	FAM164C	NP_001035895.1	ILMN_2354269	0001030133	A	1485	TGCCCTCAGAATTGATGGGTGAAGACACTGAAGAGTCATGAGCAGGCTCC	14	+	74614476-74614525	14q24.3b	Homo sapiens family with sequence similarity 164, member C (FAM164C), transcript variant 2, mRNA.				FLJ23093	FLJ23093
Homo sapiens	RefSeq	XM_001720253.1	ILMN_337282	LOC730313	XM_001720253.1	XM_001720253.1		730313	169170503	XM_001720253.1	LOC730313	XP_001720305.1	ILMN_3237656	0006020743	S	2541	ATACGCCAGACGTGGTGGCTCATGCCTGTAATCCCAGCGCTTTGGAAGGC	7	+	71854539-71854588		PREDICTED: Homo sapiens hypothetical LOC730313 (LOC730313), mRNA.					
Homo sapiens	RefSeq	NM_015002.2	ILMN_7606	FBXO21	NM_015002.2	NM_015002.2		23014	53692181	NM_015002.2	FBXO21	NP_055817.1	ILMN_1745887	0002480128	A	3931	CATGGGGCTCCAGGAAGCCTGTATCACCTGTGTAAGTTGGTATTTGGGCA	12	-	117581816-117581865	12q24.22b	Homo sapiens F-box protein 21 (FBXO21), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]	FBX21; MGC26682; FLJ90233; DKFZp434G058; KIAA0875	FBX21; MGC26682; FLJ90233; DKFZp434G058; KIAA0875
Homo sapiens	RefSeq	NM_207328.2	ILMN_28499	GPAT2	NM_207328.2	NM_207328.2		150763	116812613	NM_207328.2	GPAT2	NP_997211.2	ILMN_2137625	0000050458	S	2357	CAGCTGCCCGATACTGAGTTGGGCTACACAGAGCAGCTGTTCCAGTTCCT	2	-	96688737-96688771:96688854-96688868	2q11.2a	Homo sapiens glycerol-3-phosphate acyltransferase 2, mitochondrial (GPAT2), nuclear gene encoding mitochondrial protein, mRNA.					
Homo sapiens	RefSeq	XM_932385.1	ILMN_34173	LOC653321	XM_932385.1	XM_932385.1		653321	89025018	XM_932385.1	LOC653321	XP_937478.1	ILMN_1746972	0007570470	I	1664	TTGGGGATGGGCAGTCCAGGGGGGCTCCCCGGAGAGGGGGACGACAGACC	7	+	72286896-72286945		PREDICTED: Homo sapiens similar to Neutrophil cytosol factor 1 (NCF-1) (Neutrophil NADPH oxidase factor 1) (47 kDa neutrophil oxidase factor) (p47-phox) (NCF-47K) (47 kDa autosomal chronic granulomatous disease protein) (NOXO2), transcript variant 3 (LOC653321), mRNA.					
Homo sapiens	RefSeq	NM_001971.4	ILMN_24603	ELA1	NM_001971.4	NM_001971.4		1990	58331208	NM_001971.4	ELA1	NP_001962.3	ILMN_1805902	0002710309	S	797	TAATGTCATCGCCTCCAACTGAACATTTTCCTGAGTCCAACGACCTTCCC	12	-	50008599-50008627:50008628-50008645:50009735-50009737	12q13.13c	Homo sapiens elastase 1, pancreatic (ELA1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	NM_016270.2	ILMN_9994	KLF2	NM_016270.2	NM_016270.2		10365	49574523	NM_016270.2	KLF2	NP_057354.1	ILMN_1735930	0003850692	S	1541	ATTACTGTACATAGAGAGACAGGTGGGCATTTTTGGGCTACCTGGTTCGT	19	+	16299231-16299280	19p13.11f	Homo sapiens Kruppel-like factor 2 (lung) (KLF2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LKLF	LKLF
Homo sapiens	RefSeq	XM_001718050.1	ILMN_343023	LOC100134073	XM_001718050.1	XM_001718050.1		100134073	169164298	XM_001718050.1	LOC100134073	XP_001718102.1	ILMN_3242105	0003170338	S	241	CATCCAGCATACGGCCAATGTCACAACAATCAGCCCTGGGCAGACACGAG					PREDICTED: Homo sapiens similar to LYPDC1 protein (LOC100134073), mRNA.					
Homo sapiens	RefSeq	NM_000715.3	ILMN_6035	C4BPA	NM_000715.3	NM_000715.3		722	62912459	NM_000715.3	C4BPA	NP_000706.1	ILMN_1810752	0002000128	S	1857	CTCATGCAGTGTCTCCCAAACCCAGAGGATGTGAAAATGGCCCTGGAGGT	1	+	205384554-205384603	1q32.2a	Homo sapiens complement component 4 binding protein, alpha (C4BPA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16330538] [evidence IPI]	C4BP; PRP	C4BP; PRP
Homo sapiens	RefSeq	NM_080282.2	ILMN_17121	ABCA10	NM_080282.3	NM_080282.3		10349	153792143	NM_080282.3	ABCA10	NP_525021.3	ILMN_1753388	0003190541	S	3458	GCTCAGATGATCCCTCCTACAATGGAGCCATCATAGTGTCTGGTGACCAG	17	-	67178818-67178867	17q24.3a	Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 10 (ABCA10), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	EST698739	EST698739
Homo sapiens	RefSeq	NM_012320.3	ILMN_25518	PLA2G15	NM_012320.3	NM_012320.3		23659	64085296	NM_012320.3	PLA2G15	NP_036452.1	ILMN_1756910	0006480037	S	2480	GGCAGTAGGCTCTAAGTGGGTGACTGGCCACAGGCCGAGAAAAGGGTACA	16	+	66852219-66852268	16q22.1c	Homo sapiens phospholipase A2, group XV (PLA2G15), mRNA.				DKFZp564A0122; ACS; LPLA2; LLPL	DKFZp564A0122; ACS; LPLA2; LLPL
Homo sapiens	RefSeq	NM_001012239.1	ILMN_182776	XKR6	NM_173683.3	NM_173683.3		286046	89886483	NM_173683.3	XKR6	NP_775954.2	ILMN_1655446	0001340156	A	2415	GCCTTATGCCCTTAGGTGCTGAGTTTCATTAAGTACTGTCACGTTTTCTC	8	-	10793151-10793200	8p23.1b	Homo sapiens XK, Kell blood group complex subunit-related family, member 6 (XKR6), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C8orf7; XRG6; C8orf21	C8orf7; XRG6; C8orf21
Homo sapiens	RefSeq	NM_001012239.1	ILMN_182776	XKR6	NM_173683.3	NM_173683.3		286046	89886483	NM_173683.3	XKR6	NP_775954.2	ILMN_1724762	0004730672	I	724	CTGTGTCGCCTCTCCGTGTGGATCTGGCAGTCGGTCATCCACCTGCTGCA	8	-	11095512-11095561	8p23.1b	Homo sapiens XK, Kell blood group complex subunit-related family, member 6 (XKR6), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C8orf7; XRG6; C8orf21	C8orf7; XRG6; C8orf21
Homo sapiens	RefSeq	NM_173683.2	ILMN_182776	XKR6	NM_173683.3	NM_173683.3		286046	89886483	NM_173683.3	XKR6	NP_775954.2	ILMN_1731175	0002000048	I	3422	TGTAAGACGAACTTGGATCACGGCTTGGTTCAGCAGAGCATGGGGGCGGG	8	-	10792144-10792193	8p23.1b	Homo sapiens XK, Kell blood group complex subunit-related family, member 6 (XKR6), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C8orf7; XRG6; C8orf21	C8orf7; XRG6; C8orf21
Homo sapiens	RefSeq	NM_007247.3	ILMN_181091	AP1GBP1	NM_007247.3	NM_007247.3		11276	38569408	NM_007247.3	AP1GBP1	NP_009178.3	ILMN_2415467	0004610112	A	4898	ATTCAGGGTGAAAATGTGGAGCTCTCGGCCTAGTGTAAAGTATCAAGATG	17	-	32952196-32952245	17q12b	Homo sapiens AP1 gamma subunit binding protein 1 (AP1GBP1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10477754] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10477754] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of beta1, gamma1, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network [goid 30121] [pmid 10477754] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 10477754] [evidence TAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC104959; SYNG	MGC104959; SYNG
Homo sapiens	RefSeq	XM_941229.1	ILMN_34798	LOC400708	XM_941229.1	XM_941229.1		400708	89057550	XM_941229.1	LOC400708	XP_946322.1	ILMN_1675165	0006660494	A	423	CGGGCACTGAGCAAAATGACAGGAGAAGGGCAGCCACAACAGCCAACACC					PREDICTED: Homo sapiens similar to Serine/threonine protein phosphatase 5 (PP5) (Protein phosphatase T) (PP-T) (PPT) (LOC400708), mRNA.					
Homo sapiens	Unigene	Hs.539742	ILMN_104713	HS.539742	Hs.539742		Hs.539742		3048969	AA909564			ILMN_1878860	0005390050	S	14	CATGGGTTTTATTTCCTCTCCTTACCACCATGGCAGTGCGAGGGGCAGTG	13	-	39956240-39956289		ol18d11.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1523829 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003528.2	ILMN_28293	HIST2H2BE	NM_003528.2	NM_003528.2		8349	22027639	NM_003528.2	HIST2H2BE	NP_003519.1	ILMN_1732071	0004230678	S	1804	CACTTACCACCTCATTTGCTTTTCTGGAGGCCATGCAATATAGGCGGGAC	1	-	149856379-149856428	1q21.2a	Homo sapiens histone cluster 2, H2be (HIST2H2BE), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [pmid 1469070] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 1469070] [evidence NAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1469070] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	H2BFQ; MGC119804; MGC129733; H2B/q; GL105; MGC129734; H2B; MGC119802; H2B.1	MGC119804; H2BFQ; MGC129733; H2B/q; GL105; MGC129734; H2B; MGC119802; H2B.1
Homo sapiens	RefSeq	NM_021818.2	ILMN_15731	SAV1	NM_021818.2	NM_021818.2		60485	18860913	NM_021818.2	SAV1	NP_068590.1	ILMN_2050654	0002070025	S	2426	GCAGGAATACTTAGCCTGTATTGGGAAGGTGCGTGAAACTCAAAGTTGCT	14	-	51100915-51100964	14q22.1b	Homo sapiens salvador homolog 1 (Drosophila) (SAV1), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16930133] [evidence IPI]	SAV; WWP4; WW45	WWP4; SAV; WW45
Homo sapiens	RefSeq	NM_007364.2	ILMN_29979	TMED3	NM_007364.2	NM_007364.2		23423	56676386	NM_007364.2	TMED3	NP_031390.1	ILMN_1719316	0005550408	S	1269	CAGCCATGCAAGCAGGACAGAATGGTGACTGGGTGCCCTTGGTGAGCTGT	15	+	77402125-77402174	15q25.1a	Homo sapiens transmembrane emp24 protein transport domain containing 3 (TMED3), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the ER-Golgi intermediate compartment system [goid 33116] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		MGC133022; C15orf22; P24B	MGC133022; C15orf22; P24B
Homo sapiens	RefSeq	XM_001717735.1	ILMN_340903	LOC728661	XM_001717735.1	XM_001717735.1		728661	169161470	XM_001717735.1	LOC728661	XP_001717787.1	ILMN_3300663	0005550592	M	5798	AGCAAACGGTTCTGTTAATTAGCGAGTCACTGTTGATTCTGCTGTGGTGG	1	-	1582925-1582974	1p36.33a	PREDICTED: Homo sapiens similar to solute carrier family 35, member E2 (LOC728661), mRNA.					
Homo sapiens	RefSeq	XM_926076.1	ILMN_39548	LOC642595	XM_926076.1	XM_926076.1		642595	89028191	XM_926076.1	LOC642595	XP_931169.1	ILMN_1652685	0000430221	S	81	GTGGCGATTTAAGAACTTTTGCAAAGGACAGAAGAGCCTTGAAGATGAGG	8	+	90185667-90185716		PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC642595), mRNA.					
Homo sapiens	RefSeq	NM_001009567.1	ILMN_163426	MRC1L1	NM_001009567.1	NM_001009567.1		414308	57546916	NM_001009567.1	MRC1L1	NP_001009567.1	ILMN_1683806	0003850048	S	1281	AGGAAGGCAGTGACCTCGCAAGTATCCACACCATTGAGGAATTCGACTTT	10	+	17891482-17891531	10p12.33c	Homo sapiens mannose receptor, C type 1-like 1 (MRC1L1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLEC13DL; bA541I19.1	CLEC13DL; bA541I19.1
Homo sapiens	RefSeq	NM_175621.2	ILMN_172876	MTE	NM_175621.2	NM_175621.2		644314	116325990	NM_175621.2	MTE	NP_783320.2	ILMN_2136089	0002760537	S	187	CCGTGGGCTGTGCCAAGTGTGCCCAGGGATGTGTTTGCAAAGGGACATCT				16q13b	Homo sapiens metallothionein E (MTE), mRNA.			Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MT1I	MT1I
Homo sapiens	RefSeq	NM_001258.1	ILMN_2562	CDK3	NM_001258.1	NM_001258.1		1018	4557438	NM_001258.1	CDK3	NP_001249.1	ILMN_1767414	0006280754	S	881	CAACTCCTGCAGTATGACCCCAGCCAGCGGATCACAGCCAAGACTGCCCT	17	+	71512974-71513023	17q25.1d	Homo sapiens cyclin-dependent kinase 3 (CDK3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 1639063] [evidence TAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [pmid 1639063] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_014751.2	ILMN_7083	MTSS1	NM_014751.4	NM_014751.4		9788	148612845	NM_014751.4	MTSS1	NP_055566.3	ILMN_1676980	0001510121	S	4199	TAACAGGGCACATTTCTGACCGAACCCTCTCAAGGCAGAGGAGGAGTTTG	8	-	125633709-125633758	8q24.13d	Homo sapiens metastasis suppressor 1 (MTSS1), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 12570871] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12570871] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 12570871] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [pmid 12570871] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 12570871] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 12570871] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 12570871] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 12082544] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]	Interacting selectively with monomeric actin, also known as G-actin [goid 3785] [pmid 12570871] [evidence IDA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 12570871] [evidence IPI]	MIM; KIAA0429; MIMA; MIMB; FLJ44694; DKFZp781P2223	MIM; KIAA0429; MIMA; MIMB
Homo sapiens	RefSeq	XM_939826.1	ILMN_40872	LOC650744	XM_939826.1	XM_939826.1		650744	88971029	XM_939826.1	LOC650744	XP_944919.1	ILMN_1654950	0005900356	S	257	TCAGTTCTGTCCATGTGGGAGACCCAGGAGGAGTCACCTGTCCCCAGGGA					PREDICTED: Homo sapiens similar to abnormal embryonic PARtitioning of cytoplasm family member (par-1) (LOC650744), mRNA.					
Homo sapiens	RefSeq	NM_032927.2	ILMN_14110	TMEM128	NM_032927.2	NM_032927.2		85013	39725660	NM_032927.2	TMEM128	NP_116316.1	ILMN_2194229	0001690386	S	1368	TCTGTTTGAGTCTTTGGAGAAAGTGGTTTCATTGTAGGTACATAGTGCAC	4	-	4288484-4288533	4p16.2b	Homo sapiens transmembrane protein 128 (TMEM128), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC13159; MGC110944	MGC13159; MGC110944
Homo sapiens	RefSeq	NM_032927.2	ILMN_14110	TMEM128	NM_032927.2	NM_032927.2		85013	39725660	NM_032927.2	TMEM128	NP_116316.1	ILMN_1764261	0003180112	S	1098	TTGGGACTACAGGCCCACGCCACCGTGCCTGGCTGGACATGTAAATTTGA	4	-	4288754-4288803	4p16.2b	Homo sapiens transmembrane protein 128 (TMEM128), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC13159; MGC110944	MGC13159; MGC110944
Homo sapiens	RefSeq	NM_006152.2	ILMN_9813	LRMP	NM_006152.2	NM_006152.2		4033	42789728	NM_006152.2	LRMP	NP_006143.2	ILMN_1804419	0007150324	S	2498	TACCAGACTCCGACACAATGGGCCACCACCAGTGTGACAGCAGGACATCC	12	+	25152225-25152261:25152262-25152274	12p12.1b	Homo sapiens lymphoid-restricted membrane protein (LRMP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 8798562] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8021504] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process by which vesicles are directed to specific destination membranes, mediated by microtubules that grow between molecules at the vesicle membrane and target membrane surfaces [goid 6903] [pmid 8021504] [evidence TAS]; Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [pmid 8021504] [evidence TAS]		JAW1	JAW1
Homo sapiens	RefSeq	XM_370944.4	ILMN_173648	LOC146177	XR_015789.1	XR_015789.1		146177	113426017	XR_015789.1	LOC146177		ILMN_1807556	0003370168	A	3913	CCCTGGTTCATAAGAGGCTAATGCAGAGTCACAGTCAGCCCATCCTGGGG	16	+	22075494-22075543	16p12.1c	PREDICTED: Homo sapiens hypothetical protein LOC146177 (LOC146177), misc RNA.					
Homo sapiens	RefSeq	XM_001719766.1	ILMN_344365	LOC100133790	XM_001719766.1	XM_001719766.1		100133790	169218153	XM_001719766.1	LOC100133790	XP_001719818.1	ILMN_3243139	0006200403	S	2310	GGCCACATTCACTGAGACCACCACATTGACTCCTACGACTGACTTTTCTG					PREDICTED: Homo sapiens similar to intestinal mucin (LOC100133790), partial mRNA.					
Homo sapiens	RefSeq	NM_033109.3	ILMN_363973	PNPT1	NM_033109.3	NM_033109.3		87178	188528627	NM_033109.3	PNPT1	NP_149100.2	ILMN_3251723	0004220551	S	4273	GAATCACTTGAGCCTGGGAAATGGAGGTTGCAGTGAGCCGAGATTGCGCC	2	-	55861454-55861503	2p16.1d	Homo sapiens polyribonucleotide nucleotidyltransferase 1 (PNPT1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 6402] [evidence IEA]	Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Catalysis of the reaction: ATP + RNA(n) = diphosphate + RNA(n+1) [goid 4654] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_001007224.1	ILMN_1865	GIMAP6	NM_001007224.1	NM_001007224.1		474344	56119217	NM_001007224.1	GIMAP6	NP_001007225.1	ILMN_2329429	0006330615	A	2426	GCCATCCCCCATCTTCCCTAGACACAGCAGACATCTGAGAAAGCTTCAGC	7	-	149954104-149954153	7q36.1c	Homo sapiens GTPase, IMAP family member 6 (GIMAP6), transcript variant 3, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	IAN6; hIAN2; FLJ22690; DKFZp686A01175	IAN6; hIAN2; FLJ22690; DKFZp686A01175
Homo sapiens	Unigene	Hs.356079	ILMN_87377	HS.356079	Hs.356079		Hs.356079		34529860	AK124143			ILMN_1875342	0002120450	S	2375	GGCAAGACAAGTTGGCCCTTTCTTACCCAGAGGTCTTTTGTGTGACTGCA	5	+	96397738-96397787		Homo sapiens cDNA FLJ42149 fis, clone THYMU1000692					
Homo sapiens	RefSeq	XM_940292.1	ILMN_30739	LOC401914	XM_940292.1	XM_940292.1		401914	89057427	XM_940292.1	LOC401914	XP_945385.1	ILMN_1658868	0006290167	A	252	CGTCCCAATGACTTACAACCTCCTGAGAGTGACACATCCTTCCCAAGCTC				19q13.12b	PREDICTED: Homo sapiens similar to C-terminal binding protein 2 isoform 2 (LOC401914), mRNA.					
Homo sapiens	RefSeq	NR_000016.1	ILMN_1783	SNORD36C	NR_000016.1	NR_000016.1		26813	22546018	NR_000016.1	SNORD36C		ILMN_2160160	0000010356	S	17	AGAATTTCTTCACCTGAATAAACCATGTGGTCAGCATTGCATCTGAGGCA	9	+	135207538-135207587	9q34.2a	Homo sapiens small nucleolar RNA, C/D box 36C (SNORD36C), small nucleolar RNA.				RNU36C; U36c	RNU36C; U36c
Homo sapiens	RefSeq	XM_001716604.1	ILMN_344299	LOC100131864	XM_001716604.1	XM_001716604.1		100131864	169161207	XM_001716604.1	LOC100131864	XP_001716656.1	ILMN_3286490	0005890037	M	745	GTTATGATGGGGAGGGACACCCTTGCTAAGGGCCTTCCAGTCACTCTGAG	1	-	6160301-6160350	1p36.31b	PREDICTED: Homo sapiens hypothetical protein LOC100131864 (LOC100131864), mRNA.					
Homo sapiens	RefSeq	NM_144990.2	ILMN_12690	SLFNL1	NM_144990.2	NM_144990.2		200172	45267820	NM_144990.2	SLFNL1	NP_659427.2	ILMN_1777637	0005700626	S	1836	TGGCGAGGCATATTTGATGACTGTGGTTACAGGGCAAGAGGCCACCCTGC	1	-	41481334-41481383	1p34.2c	Homo sapiens schlafen-like 1 (SLFNL1), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	FLJ23878; MGC43873	FLJ23878; MGC43873
Homo sapiens	RefSeq	NM_019071.2	ILMN_177083	ING3	NM_019071.2	NM_019071.2		54556	38201654	NM_019071.2	ING3	NP_061944.2	ILMN_2237746	0007550707	I	1921	GCAGGCTGAAGGAAATGGTTCATGTGATAATGTGGGCTGGTATCCTCTAG	7	+	120010522-120010571	7q31.31d	Homo sapiens inhibitor of growth family, member 3 (ING3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ20089; p47ING3; ING2; Eaf4	FLJ20089; p47ING3; ING2; Eaf4
Homo sapiens	RefSeq	XR_038306.1	ILMN_339064	LOC730535	XR_038306.1	XR_038306.1		730535	169217627	XR_038306.1	LOC730535		ILMN_3223197	0006040253	A	1157	TCAAGACTCTTTACTAGTGACAGTTTCCCAACCAAGGAGAATAGGAAGAA					PREDICTED: Homo sapiens misc_RNA (LOC730535), miscRNA.					
Homo sapiens	RefSeq	NM_000286.1	ILMN_164025	PEX12	NM_000286.1	NM_000286.1		5193	4505720	NM_000286.1	PEX12	NP_000277.1	ILMN_2200708	0005130092	S	2302	AAAAGGAATAGGGGTAGAGTGTTACAGAGAGTAGTCTGAAGATTCCTGTG	17	-	30926176-30926225	17q12a	Homo sapiens peroxisomal biogenesis factor 12 (PEX12), mRNA.	The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 9922452] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 9090384] [evidence IDA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 10562279] [evidence TAS]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 9354782] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 9090384] [evidence IMP]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 12456682] [evidence NAS]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 10562279] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10562279] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10562279] [evidence IMP]		
Homo sapiens	RefSeq	NM_000286.1	ILMN_164025	PEX12	NM_000286.1	NM_000286.1		5193	4505720	NM_000286.1	PEX12	NP_000277.1	ILMN_1664448	0004890561	S	1971	CCCAGGTTAGACCGCATAAAAAATAAAGTGAACAGTGAGGTGGTAGCAAG	17	-	30926507-30926556	17q12a	Homo sapiens peroxisomal biogenesis factor 12 (PEX12), mRNA.	The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 9922452] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 9090384] [evidence IDA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 10562279] [evidence TAS]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 9354782] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 9090384] [evidence IMP]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 12456682] [evidence NAS]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 10562279] [evidence IMP]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10562279] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10562279] [evidence IMP]		
Homo sapiens	RefSeq	XM_945683.1	ILMN_33194	LOC654069	XM_945683.1	XM_945683.1		654069	89036197	XM_945683.1	LOC654069	XP_950776.1	ILMN_1784104	0005090246	I	578	GGGAGTATACTGATTAAAAAGCACACATTGGGAGTGATAGTAAGAAGAGC					PREDICTED: Homo sapiens similar to R3H domain protein KIAA1002, transcript variant 2 (LOC654069), mRNA.					
Homo sapiens	RefSeq	XR_038194.1	ILMN_335506	LOC400403	XR_038194.1	XR_038194.1		400403	169208225	XR_038194.1	LOC400403		ILMN_3199718	0002850546	A	5192	GGGTGAGCTTCCGCGTTGTGACTCTGCCCATGTGTGTGCTTCAGTGTGCT	15	+	75987368-75987417	15q24.3b	PREDICTED: Homo sapiens misc_RNA (LOC400403), miscRNA.					
Homo sapiens	RefSeq	NM_003972.2	ILMN_8616	BTAF1	NM_003972.2	NM_003972.2		9044	50345994	NM_003972.2	BTAF1	NP_003963.1	ILMN_1676842	0002070209	S	6845	GGCTGGCCATACACATAGGCATCAGTTTAACAACCATCAGACCTCAGCTG	10	+	93752010-93752059	10q23.32b	Homo sapiens BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) (BTAF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 9488487] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9342322] [evidence NAS]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	TAF172; KIAA0940; TAF(II)170; TAFII170; MOT1; MGC138406	TAF172; KIAA0940; TAF(II)170; TAFII170; MOT1; MGC138406
Homo sapiens	RefSeq	NM_001093732.1	ILMN_309671	LOC644928	NM_001093732.1	NM_001093732.1		644928	148225455	NM_001093732.1	LOC644928	NP_001087201.1	ILMN_3248833	0004480356	S	287	GATCTCGTGAAGCCCGCAAGGACCGAACACCCCCATCCCGATTTAGACCT	1	-	58294431-58294480	1p32.2a	Homo sapiens hCG2033311 (LOC644928), mRNA.					
Homo sapiens	RefSeq	NM_030648.1	ILMN_165422	SETD7	NM_030648.2	NM_030648.2		80854	83035135	NM_030648.2	SETD7	NP_085151.1	ILMN_1720916	0003520500	S	1920	GAGCCCACTTCTAAAGTCATTTCACCCCTCAGCCCTATTCTCTTTCTTAG	4	-	140651684-140651733	4q31.1d	Homo sapiens SET domain containing (lysine methyltransferase) 7 (SETD7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12514135] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16415881] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15525938] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16415881] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [pmid 12514135] [evidence NAS]	SET9; KIAA1717; SET7; SET7/9; FLJ21193	SET9; KIAA1717; FLJ21193
Homo sapiens	RefSeq	NM_003958.2	ILMN_23289	RNF8	NM_003958.2	NM_003958.2		9025	34304334	NM_003958.2	RNF8	NP_003949.1	ILMN_1672178	0004480086	A	5181	GTTGAGGCAGTAGGAGTGTGGGGTTCTTGGGAAGACGATGGGGCCTTGTA	6	+	37470085-37470134	6p21.2c	Homo sapiens ring finger protein 8 (RNF8), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18001824] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18001825] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0646; FLJ12013	KIAA0646; FLJ12013
Homo sapiens	RefSeq	NM_003958.2	ILMN_23289	RNF8	NM_003958.2	NM_003958.2		9025	34304334	NM_003958.2	RNF8	NP_003949.1	ILMN_1677113	0006840523	I	1403	GTGCCCACAGTTTCTGCTCCTACTGTATCAATGAATGGATGAAGCGGAAG	6	+	37456920-37456969	6p21.2c	Homo sapiens ring finger protein 8 (RNF8), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18001824] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18001825] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0646; FLJ12013	KIAA0646; FLJ12013
Homo sapiens	RefSeq	XR_016528.2	ILMN_163878	LOC442142	XR_016528.2	XR_016528.2		442142	169167338	XR_016528.2	LOC442142		ILMN_3292840	0007210014	M	1404	CAAGGCCAAGAAGTAGGAGCTAGGGGCTTGCCTGGACGCATCGGTGAGGC	5	-	157050032-157050081	5q33.3b	PREDICTED: Homo sapiens similar to SOX30 protein (LOC442142), mRNA.					
Homo sapiens	RefSeq	Hs.387539	ILMN_175165	CD1D	NM_001766.3	NM_001766.3		912	110618228	NM_001766.3	CD1D	NP_001757.1	ILMN_1892782	0002600093	S	3608	AGAGGAACCTAAGCTGAAGAGCGCCACGTGAGGGTGGGCAATGTGGTACC	1	+	156422665-156422714	1q23.1e	Homo sapiens CD1d molecule (CD1D), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11315191] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]	The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [pmid 14500461] [evidence TAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which T cells that express T cell receptors that are restricted by self MHC protein complexes and tolerant to self antigens are selected for further maturation [goid 45058] [pmid 14500461] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45089] [pmid 14500461] [evidence TAS]; The process by which an antigen-presenting cell expresses lipid antigen of endogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family [goid 48006] [pmid 10523605] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11315191] [evidence IC ]; Interacting selectively with beta-2-microglobulin [goid 30881] [pmid 14500461] [evidence TAS]; Interacting selectively with an exogenous lipid antigen (examples include microbial lipids and glycolipids) [goid 30884] [pmid 10523605] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 14500461] [evidence IPI]	R3; MGC34622; CD1A	
Homo sapiens	RefSeq	NM_001766.2	ILMN_175165	CD1D	NM_001766.3	NM_001766.3		912	110618228	NM_001766.3	CD1D	NP_001757.1	ILMN_1719433	0006400358	S	1788	GACCTACCAGGGACAAGCAGGTAAGAGCTGATGTGAGTGTGTGTGATGGG	1	+	156420845-156420894	1q23.1e	Homo sapiens CD1d molecule (CD1D), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11315191] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]	The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [pmid 14500461] [evidence TAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which T cells that express T cell receptors that are restricted by self MHC protein complexes and tolerant to self antigens are selected for further maturation [goid 45058] [pmid 14500461] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45089] [pmid 14500461] [evidence TAS]; The process by which an antigen-presenting cell expresses lipid antigen of endogenous origin in association with an MHC class Ib protein complex on its cell surface. Class Ib here refers to non-classical class I molecules, such as those of the CD1 family [goid 48006] [pmid 10523605] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11315191] [evidence IC ]; Interacting selectively with beta-2-microglobulin [goid 30881] [pmid 14500461] [evidence TAS]; Interacting selectively with an exogenous lipid antigen (examples include microbial lipids and glycolipids) [goid 30884] [pmid 10523605] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 14500461] [evidence IPI]	R3; MGC34622; CD1A	
Homo sapiens	RefSeq	NM_001004339.1	ILMN_172411	ZYG11A	XM_001133615.1	XM_001133615.1		440590	113408671	XM_001133615.1	ZYG11A	XP_001133615.1	ILMN_1723439	0004480070	A	1339	AGTGCAGTTCACAGCCAGTGCTTGCGCTCTCAACCTAACACGCCAGGGCC	1	+	53102282-53102331	1p32.3d	PREDICTED: Homo sapiens zyg-11 homolog A (C. elegans) (ZYG11A), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		ZYG11
Homo sapiens	RefSeq	XM_925950.1	ILMN_37170	LOC653093	XM_925950.1	XM_925950.1		653093	89041764	XM_925950.1	LOC653093	XP_931043.1	ILMN_1709570	0007610367	S	141	TGCCAGCCCTAATGGCCACAGATTTTCTGACGATTAGTAAGTATTTATTC	17	-	65214916-65214929:65214930-65214965		PREDICTED: Homo sapiens similar to CG9240-PA (LOC653093), mRNA.					
Homo sapiens	RefSeq	XM_001726805.1	ILMN_351021	LOC100134551	XM_001726805.1	XM_001726805.1		100134551	169170793	XM_001726805.1	LOC100134551	XP_001726857.1	ILMN_3248146	0001430100	S	1	ATGAAGCATGCAGGCCTGGGTGAAGGAATACCTCCTGACAACTCCGGGAA	7	+	149776110-149776159		PREDICTED: Homo sapiens hypothetical protein LOC100134551 (LOC100134551), mRNA.					
Homo sapiens	RefSeq	NM_024678.3	ILMN_13605	NARS2	NM_024678.3	NM_024678.3		79731	39725682	NM_024678.3	NARS2	NP_078954.3	ILMN_1797332	0005860592	S	1801	CACGTAAGGATGAGCTCCCGCAAGAAGAGGTACTTATAGCAAGGGGACTC	11	-	77825133-77825182	11q14.1a	Homo sapiens asparaginyl-tRNA synthetase 2, mitochondrial (putative) (NARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of coupling asparagine to asparaginyl-tRNA, catalyzed by asparaginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6421] [evidence IEA]; The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6422] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp) [goid 4815] [evidence IEA]; Catalysis of the reaction: ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn) [goid 4816] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	SLM5; FLJ23441	SLM5; FLJ23441
Homo sapiens	RefSeq	NM_198941.1	ILMN_10116	SERINC3	NM_198941.1	NM_198941.1		10955	39812105	NM_198941.1	SERINC3	NP_945179.1	ILMN_1665065	0000840259	I	1596	CACCCAACTCAGTGATGTCCTAATTACTGCTGGATGACTCAAGCCACACC	20	-	43124945-43124994	20q13.12a	Homo sapiens serine incorporator 3 (SERINC3), transcript variant 2, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10559794] [evidence TAS]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TMS-1; TDE; SBBI99; DIFF33; TDE1; AIGP1	TMS-1; TDE; SBBI99; DIFF33; TDE1; AIGP1
Homo sapiens	RefSeq	XM_933375.1	ILMN_30799	LOC646064	XM_933375.1	XM_933375.1		646064	89039665	XM_933375.1	LOC646064	XP_938468.1	ILMN_1691574	0006660048	S	1382	TGTATAGTCTGCAGATGTGGATCCTAACTCCTGCGAGAAGTAACTCACAG	16	-	3067402-3067451		PREDICTED: Homo sapiens hypothetical protein LOC646064 (LOC646064), mRNA.					
Homo sapiens	Unigene	Hs.566661	ILMN_118933	HS.566661	Hs.566661		Hs.566661		12611523	BG118017			ILMN_1853881	0001780162	S	240	CTAGCCACAAATTTTCCAGTTTTTCCGTTCATTCAGTATGTCGTCACTAA	7	-	115700221-115700270		602351267F1 NIH_MGC_90 Homo sapiens cDNA clone IMAGE:4445969 5, mRNA sequence					
Homo sapiens	RefSeq	NM_020818.2	ILMN_178374	KIAA1409	NM_020818.3	NM_020818.3		57578	150456443	NM_020818.3	KIAA1409	NP_065869.3	ILMN_1695061	0005700703	S	7978	GGCCCAGGTGGAGATCCAGTCCTCGGAAGCAGCCTCTCAATTTTATCCTC	14	+	93242949-93242998	14q32.13a	Homo sapiens KIAA1409 (KIAA1409), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ43337	FLJ43337
Homo sapiens	RefSeq	XM_939968.1	ILMN_178374	KIAA1409	NM_020818.3	NM_020818.3		57578	150456443	NM_020818.3	KIAA1409	NP_065869.3	ILMN_1688227	0000290097	S	497	TTGGACTACCAAGGCCTCTACGTGACTTTGGTGACCCTCCTGGATCTAGT	14	+	93010417-93010466	14q32.13a	Homo sapiens KIAA1409 (KIAA1409), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ43337	
Homo sapiens	RefSeq	NM_032892.2	ILMN_19308	FRMD5	NM_032892.2	NM_032892.2		84978	52840100	NM_032892.2	FRMD5	NP_116281.1	ILMN_1727592	0005890687	I	2573	GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCAC	15	-	41952920-41952969	15q15.3b-q15.3c	Homo sapiens FERM domain containing 5 (FRMD5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	MGC14161	MGC14161
Homo sapiens	RefSeq	XM_001717119.1	ILMN_340869	LOC100127946	XM_001717119.1	XM_001717119.1		100127946	169203549	XM_001717119.1	LOC100127946	XP_001717171.1	ILMN_3259920	0001010632	M	428	CAGAAGGGCCTGGGAGAGGACATTGTGGGCAAAGGAGATAGGGAATCTGC				11q13.3b	PREDICTED: Homo sapiens hypothetical LOC100127946 (LOC100127946), mRNA.					
Homo sapiens	RefSeq	NR_031590.1	ILMN_388515	MIR1179	NR_031590.1	NR_031590.1		100302235	269847018	NR_031590.1	MIR1179		ILMN_3308205	0000540521	S	1	GCTGGAAAGGAAGAAGCATTCTTTCATTGGTTGGTGTGTATTGCCTTGTC					Homo sapiens microRNA 1179 (MIR1179), microRNA.					
Homo sapiens	RefSeq	NM_058197.2	ILMN_25302	CDKN2A	NM_000077.3	NM_000077.3		1029	47132606	NM_000077.3	CDKN2A	NP_000068.1	ILMN_1717714	0006620014	A	754	CAACTGCCCCCGCCACAACCCACCCCGCTTTCGTAGTTTTCATTTAGAAA	9	-	21968107-21968156	9p21.3c	Homo sapiens cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) (CDKN2A), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 17110379] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 17110379] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16243918] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16243918] [evidence IDA]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 12082630] [evidence IMP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [pmid 15582998] [evidence IMP]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 12082630] [evidence IMP]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 12082630] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 15582998] [evidence IMP]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [pmid 12082630] [evidence IMP]; A preprogrammed process that occurs in an organism that is associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components [goid 10149] [pmid 14966292] [evidence IMP]; Any process that modulates the rate or extent of progression from G2 phase to M phase of the mitotic cell cycle [goid 10389] [pmid 15582998] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of B cell proliferation [goid 30889] [evidence ISS]; Any process that affects the structure and integrity of a protein by altering the likelihood of its degradation or aggregation [goid 31647] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of immature T cell proliferation in the thymus [goid 33088] [evidence ISS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line [goid 48103] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity, the catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 51444] [evidence ISS]; A point in the eukaryotic cell cycle where progress through the cycle can be halted until conditions are suitable for the cell to proceed to the next stage [goid 75] [pmid 16243918] [evidence IMP]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of cell adhesion to the extracellular matrix [goid 1953] [pmid 10205165] [evidence IMP]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10208428] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 16243918] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 16243918] [evidence IMP]; A preprogrammed process that occurs in an organism that is associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components [goid 10149] [pmid 14720514] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [pmid 10353611] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 8259215] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 10208428] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [pmid 8259215] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17909018] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15989956] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12740913] [evidence IPI]; Stops, prevents or reduces the activity of a ubiquitin-protein ligase [goid 55105] [evidence ISS]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 8259215] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11278317] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8259215] [evidence IPI]; Interacting selectively with NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters [goid 51059] [pmid 10353611] [evidence IDA]	p14ARF; TP16; p16; CDKN2; MTS1; INK4a; CMM2; MLM; ARF; p16INK4a; INK4; p14; p19; p16INK4; CDK4I	p14ARF; TP16; p16; CDKN2; MTS1; INK4a; CMM2; MLM; ARF; p16INK4a; INK4; p14; p16INK4; p19; CDK4I
Homo sapiens	RefSeq	NM_031920.2	ILMN_138916	ARG99	NM_031920.2	NM_031920.2		83857	21361986	NM_031920.2	ARG99	NP_114126.2	ILMN_1707529	0004570735	I	163	CTTCCGTCTGTGGATAATGGGAGGATCTATGCCCCTCTTTTCAGAGCAGG	12	-	29704113-29704162	12p11.22a	Homo sapiens ARG99 protein (ARG99), transcript variant 1, mRNA.				OLF	OLF
Homo sapiens	RefSeq	NM_130768.1	ILMN_22812	ASZ1	NM_130768.1	NM_130768.1		136991	18640737	NM_130768.1	ASZ1	NP_570124.1	ILMN_1782246	0001510431	S	1190	GATAACACTGGAATGGGCTTCTCCCCAGAATTTTACTTCAGTTTGTGAAG	7	-	116794706-116794755	7q31.2c	Homo sapiens ankyrin repeat, SAM and basic leucine zipper domain containing 1 (ASZ1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]		Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12040005] [evidence NAS]	ALP1; GASZ; Orf3; C7orf7; MGC26634; ANKL1	ALP1; GASZ; Orf3; C7orf7; MGC26634; ANKL1
Homo sapiens	RefSeq	NM_130768.1	ILMN_22812	ASZ1	NM_130768.1	NM_130768.1		136991	18640737	NM_130768.1	ASZ1	NP_570124.1	ILMN_2048957	0001190274	S	1384	AGAGGACAGCTATTACCATATGCGGATTCGGTTTTCTTCTTTTCATTTGC	7	-	116790909-116790958	7q31.2c	Homo sapiens ankyrin repeat, SAM and basic leucine zipper domain containing 1 (ASZ1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]		Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12040005] [evidence NAS]	ALP1; GASZ; Orf3; C7orf7; MGC26634; ANKL1	ALP1; GASZ; Orf3; C7orf7; MGC26634; ANKL1
Homo sapiens	RefSeq	XM_001723598.1	ILMN_338321	LOC100131974	XM_001723598.1	XM_001723598.1		100131974	169161423	XM_001723598.1	LOC100131974	XP_001723650.1	ILMN_3238377	0006450112	S	277	GCAATAACATTGACCACTATATGGAGCAGCACTACTGCAAGCAGCTGGCC	1	-	147582054-147582103	1q21.1e	PREDICTED: Homo sapiens hypothetical protein LOC100131974 (LOC100131974), mRNA.					
Homo sapiens	RefSeq	XM_931594.1	ILMN_46777	LOC648365	XM_943292.2	XM_943292.2		648365	113420479	XM_943292.2	LOC648365	XP_948385.2	ILMN_1671072	0007330609	S	327	CGGGTGTGCGGAGAGGGAAGTCCCGGAGTCTGCAGTGGCCCGGCTGTGCC					PREDICTED: Homo sapiens hypothetical LOC648365 (LOC648365), mRNA.					
Homo sapiens	RefSeq	XM_939306.1	ILMN_34400	LOC650214	XM_939306.1	XM_939306.1		650214	89036233	XM_939306.1	LOC650214	XP_944399.1	ILMN_1673643	0001430474	S	1	CATGACCCGGCGGCAGTAGCCGTGGCAGCAGCCGCGGCGGCTCCGCGAGC					PREDICTED: Homo sapiens similar to protein phosphatase 1H (PP2C domain containing) (LOC650214), mRNA.					
Homo sapiens	RefSeq	NM_024861.1	ILMN_308656	C2ORF54	NM_001085437.1	NM_001085437.1		79919	146198548	NM_001085437.1	C2orf54	NP_001078906.1	ILMN_1665471	0004560519	S	2178	CCCCACCCAAATCTCAGGTAGAATTGGATCTGTGTCCCCACCCAAGTCTC	2	-	241825762-241825811	2q37.3f	Homo sapiens chromosome 2 open reading frame 54 (C2orf54), transcript variant 1, mRNA.				MGC150431; MGC150432; FLJ22671	MGC150431; MGC150432
Homo sapiens	RefSeq	NM_178276.2	ILMN_29190	SERINC5	NM_178276.2	NM_178276.2		256987	31342170	NM_178276.2	SERINC5	NP_840060.1	ILMN_1789464	0005810477	S	1585	GTCCGCAGTTCCCAGGAATTTGTCCAGTTGATATTACCCTAAGCCCCTGT	5	-	79443077-79443126	5q14.1d	Homo sapiens serine incorporator 5 (SERINC5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. They are important constituents of cell membranes [goid 6658] [evidence ISS]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51347] [evidence ISS]		C5orf12; TPO1	C5orf12; TPO1
Homo sapiens	RefSeq	NR_001590.1	ILMN_12466	IFITM4P	NR_001590.1	NR_001590.1		340198	39573714	NR_001590.1	IFITM4P		ILMN_1694058	0002480451	S	3	GAACCACACTGCCCAAACCTTCTTCATTCCTGCCAACAGTGGCTGCCCTC	6	-	29826852-29826901	6p22.1a	Homo sapiens interferon induced transmembrane protein 4 pseudogene (IFITM4P), non-coding RNA.				dJ377H14.5	dJ377H14.5
Homo sapiens	RefSeq	NR_001590.1	ILMN_12466	IFITM4P	NR_001590.1	NR_001590.1		340198	39573714	NR_001590.1	IFITM4P		ILMN_1770071	0001030347	S	8	ACACTGCCCAAACCTTCTTCATTCCTGCCAACAGTGGCTGCCCTCCCCCG	6	-	29826847-29826896	6p22.1a	Homo sapiens interferon induced transmembrane protein 4 pseudogene (IFITM4P), non-coding RNA.				dJ377H14.5	dJ377H14.5
Homo sapiens	RefSeq	NR_030620.1	ILMN_388145	MIR374B	NR_030620.1	NR_030620.1		100126317	262206164	NR_030620.1	MIR374B		ILMN_3309539	0007100653	S	21	CCTGCTAAGTGTCCTAGCACTTAGCAGGTTGTATTATCATTGTCCGTGTC				Xq13.2c	Homo sapiens microRNA 374b (MIR374B), microRNA.					
Homo sapiens	Unigene	Hs.582437	ILMN_134618	HS.582437	Hs.582437		Hs.582437		47301840	CN285426			ILMN_1831590	0004760242	S	6	TGCAGTCCGTGCCTCTCTGCCCGCGCGGGGACCACACAGTTGGAGAGGCT	5	-	5193111-5193160		17000531932985 GRN_ES Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	Unigene	Hs.317248	ILMN_85980	HS.317248	Hs.317248		Hs.317248		19045966	BM724635			ILMN_1820267	0001030722	S	633	GCCACCGCTGTCTGGTAACTGTAAATGTGTATTTTGGCACTTGTACTCCA	9	-	20332524-20332573		UI-E-EJ0-ais-c-13-0-UI.r1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ais-c-13-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_003858.2	ILMN_4502	CCNK	NM_003858.3	NM_003858.3		8812	150417987	NM_003858.3	CCNK	NP_003849.2	ILMN_1689123	0001010053	S	1622	CATTCGGTGACATTCTCTCCCATGACACCCAGAAGGGGCAGAAGAACCAC	14	+	99047294-99047343	14q32.2b	Homo sapiens cyclin K (CCNK), transcript variant 2, mRNA.		Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9632813] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9632813] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	CPR4; MGC9113	CPR4; MGC9113
Homo sapiens	RefSeq	NM_002989.2	ILMN_4876	CCL21	NM_002989.2	NM_002989.2		6366	22165425	NM_002989.2	CCL21	NP_002980.1	ILMN_1677505	0001340626	S	586	CTGGAGCAGCCACCCCATGCTGGCCTTGCCACACTCTTTCTCCTGCTTTA	9	-	34709244-34709293	9p13.3c	Homo sapiens chemokine (C-C motif) ligand 21 (CCL21), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10861057] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9235955] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10861057] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10201891] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9235955] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10861057] [evidence TAS]	MGC34555; 6Ckine; TCA4; SLC; ECL; CKb9; SCYA21	MGC34555; TCA4; ECL; SCYA21; 6Ckine; SLC; CKb9
Homo sapiens	RefSeq	NM_001005516.1	ILMN_180837	OR5K3	NM_001005516.1	NM_001005516.1		403277	53933277	NM_001005516.1	OR5K3	NP_001005516.1	ILMN_2196609	0007650240	S	738	GTCAATATTCTGTGATTCCCTTCTCTTCATGTATGCTCGACCAGGTGCAG	3	+	98110247-98110296	3q11.2c	Homo sapiens olfactory receptor, family 5, subfamily K, member 3 (OR5K3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_001005516.1	ILMN_180837	OR5K3	NM_001005516.1	NM_001005516.1		403277	53933277	NM_001005516.1	OR5K3	NP_001005516.1	ILMN_1687882	0000830241	S	189	AGGCAACCTAGTTCTGATGGATTCCTGCTGTTCCTCTGCTATTACTCCCA	3	+	98109698-98109747	3q11.2c	Homo sapiens olfactory receptor, family 5, subfamily K, member 3 (OR5K3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_032167.1	ILMN_705	RUNDC2A	NM_032167.2	NM_032167.2		84127	116292169	NM_032167.2	RUNDC2A	NP_115543.2	ILMN_1775357	0006040390	S	1842	GCCACTAGCACAGGAAGCTCAGGACGAAGGCAGCGTTAGGAGAATAGTTG	16	+	12054236-12054285	16p13.13a	Homo sapiens RUN domain containing 2A (RUNDC2A), mRNA.				FLJ12363	FLJ12363
Homo sapiens	RefSeq	NM_144608.1	ILMN_12244	HEXIM2	NM_144608.1	NM_144608.1		124790	21389406	NM_144608.1	HEXIM2	NP_653209.1	ILMN_1701006	0001070358	S	1160	AGCTGGGTCTCAAGGAGGCAGGTGGCAGATGAAAACCACCGTCAACACCC	17	+	40603019-40603068	17q21.31d	Homo sapiens hexamthylene bis-acetamide inducible 2 (HEXIM2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 15713662] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [pmid 15713662] [evidence IDA]	Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 15713662] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713661] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713662] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 15713662] [evidence IDA]; Interacting selectively with a small nuclear RNA (snRNA) [goid 17069] [pmid 15713662] [evidence IDA]	FLJ32384; L3	FLJ32384; L3
Homo sapiens	RefSeq	NM_178516.3	ILMN_180936	EXOC3L	NM_178516.3	NM_178516.3		283849	106879203	NM_178516.3	EXOC3L	NP_848611.2	ILMN_2172735	0007040392	S	2121	AGCTTCAGCAGCTTTTCCTCAGTTTGGGCCTGGAGGAGAACGCGCACTGC	16	-	67218689-67218713:67218805-67218829	16q22.1a	Homo sapiens exocyst complex component 3-like (EXOC3L), mRNA.				FLJ35587; MGC88052; FLJ35539	FLJ35587; MGC88052; FLJ35539
Homo sapiens	RefSeq	NM_144675.1	ILMN_6757	GSG1L	NM_144675.1	NM_144675.1		146395	21389570	NM_144675.1	GSG1L	NP_653276.1	ILMN_1671055	0004150538	S	882	AGGGCAGGCCCAAGGGAATGCACAGGGCTGCACAGAGTGACTTTGGGACA	16	-	27709957-27710006	16p11.2e	Homo sapiens GSG1-like (GSG1L), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC18079; PRO19651	MGC18079; PRO19651
Homo sapiens	RefSeq	XM_930984.1	ILMN_44060	LOC642656	XM_930984.1	XM_930984.1		642656	88974846	XM_930984.1	LOC642656	XP_936077.1	ILMN_1669193	0002100020	S	181	GTGTCATTAGCTAAAACTAGTTCAACTGCCACTGCAATTCAGGGATCAGA	4	+	71185988-71186037	4q13.3a	PREDICTED: Homo sapiens hypothetical LOC642656 (LOC642656), mRNA.					
Homo sapiens	RefSeq	XM_001719571.1	ILMN_351648	LOC100132429	XM_001719571.1	XM_001719571.1		100132429	169177312	XM_001719571.1	LOC100132429	XP_001719623.1	ILMN_3248541	0002000326	S	2479	CCCCCAAGCCCCAGGTGTTCTTCGACTTTCCTTGGCATTGATGGAAAGGT	9	+	45618777-45618826	9p11.2b	PREDICTED: Homo sapiens hypothetical protein LOC100132429 (LOC100132429), mRNA.					
Homo sapiens	RefSeq	XM_941536.1	ILMN_34034	LOC344405	XM_941536.2	XM_941536.2		344405	113413818	XM_941536.2	LOC344405	XP_946629.1	ILMN_1704704	0000540202	A	278	GCTGTGCCACACCCTTGGCACTTTTCTGTGATGGTGGAGATGTGAAGTTT				2p16.1d	PREDICTED: Homo sapiens hypothetical LOC344405 (LOC344405), mRNA.					
Homo sapiens	RefSeq	NM_001013705.1	ILMN_20202	LOC440337	NM_001013705.1	NM_001013705.1		440337	61966864	NM_001013705.1	LOC440337	NP_001013727.1	ILMN_1687568	0004670025	S	1692	CACCCTACCCGCATGAGAAGGTTGGGGAAATTCAGAGTTCATAGGAGGGC	16	+	6369456-6369505	16p13.2d	Homo sapiens hypothetical gene supported by AK094332 (LOC440337), mRNA.					
Homo sapiens	RefSeq	NM_183238.1	ILMN_19451	ZNF605	NM_183238.2	NM_183238.2		90462	141802368	NM_183238.2	ZNF605	NP_899061.1	ILMN_1712269	0006280435	S	5719	AGTCGACTGCCAAAGAGGCCCAGCAGAGGGCAGCACCCCCATCATTTTTT	12	-	132008514-132008563	12q24.33d	Homo sapiens zinc finger protein 605 (ZNF605), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ14967	
Homo sapiens	RefSeq	XR_041931.1	ILMN_340267	LOC727757	XR_041931.1	XR_041931.1		727757	169210623	XR_041931.1	LOC727757		ILMN_3282066	0005220768	M	72	GGGGGAGTTGGGTAATCGCTCCCGTTGCATCCTGTTTCTGTCTGAAAACC				16p13.2b	PREDICTED: Homo sapiens misc_RNA (LOC727757), miscRNA.					
Homo sapiens	Unigene	Hs.200267	ILMN_81577	HS.200267	Hs.200267		Hs.200267		16924288	BC017428			ILMN_1853160	0005870292	S	727	GCCCCAAAGACAAATTCCCAACACTTCCTAGCAGGCCAGTTCTCTGACTA	9	-	4248398-4248447		Homo sapiens, clone IMAGE:4703783, mRNA					
Homo sapiens	RefSeq	NM_205846.1	ILMN_1314	PRELID2	NM_205846.1	NM_205846.1		153768	45593131	NM_205846.1	PRELID2	NP_995318.1	ILMN_2383874	0003450730	A	1586	GTACCTAGCACACTGCCTAGTACATAGTAGAAGTCCAGGAAATGGAAGCC	5	-	145139577-145139626	5q32c	Homo sapiens PRELI domain containing 2 (PRELID2), transcript variant 2, mRNA.				FLJ38376; MGC21644	FLJ38376; MGC21644
Homo sapiens	RefSeq	XM_944895.1	ILMN_40712	LOC651732	XM_944895.1	XM_944895.1		651732	89043078	XM_944895.1	LOC651732	XP_949988.1	ILMN_1673625	0006660008	S	499	CACCGGATAGGGCAGACAGGACCTGGCAGACAAAAAGTCTTGAGGAAGGC					PREDICTED: Homo sapiens hypothetical LOC651732 (LOC651732), mRNA.					
Homo sapiens	Unigene	Hs.547341	ILMN_109507	HS.547341	Hs.547341		Hs.547341		46548752	CN479898			ILMN_1830314	0002490735	S	612	GGGTAGCCAAGATGGGGAAAGAGGCAGGGCGACTGGGAGAGACAGAGAAA	11	+	18250827-18250876		UI-H-EU0-azk-h-02-0-UI.s1 NCI_CGAP_Car1 Homo sapiens cDNA clone UI-H-EU0-azk-h-02-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_012235.2	ILMN_179214	SCAP	NM_012235.2	NM_012235.2		22937	66932901	NM_012235.2	SCAP	NP_036367.2	ILMN_1677534	0003140382	S	4146	AATGCACTGAACCTGGACTTGGGGGAAAGAGCCGAGTATCTTCCAGCCGC	3	-	47455700-47455749	3p21.31g	Homo sapiens SREBF chaperone (SCAP), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11726962] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11726962] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11726962] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The process by which a sterol regulatory element binding protein (SREBP) mediates an increase in rate or extent of transcription of nuclear target genes in response to sterol depletion. SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes [goid 6994] [pmid 11726962] [evidence IMP]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cholesterol [goid 45541] [pmid 11969205] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors [goid 45716] [pmid 11726974] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 11726962] [evidence NAS]	KIAA0199	KIAA0199
Homo sapiens	RefSeq	NM_016492.3	ILMN_5102	RANGRF	NM_016492.3	NM_016492.3		29098	41462396	NM_016492.3	RANGRF	NP_057576.2	ILMN_1704261	0006370719	S	776	CCTGTGCGTAAACATAAGACAATCCCTCTTCAGAATAAACTTGCTTTATA	17	+	8134076-8134125	17p13.1c	Homo sapiens RAN guanine nucleotide release factor (RANGRF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	MOG1; RANGNRF; DKFZp686F02139; HSPC165; HSPC236; MGC110973	MOG1; RANGNRF; DKFZp686F02139; HSPC165; HSPC236; MGC110973
Homo sapiens	Unigene	Hs.483183	ILMN_95935	HS.483183	Hs.483183		Hs.483183		31149383	CD365293			ILMN_1880997	0001340270	S	619	TGACCTAGTACATATCTGAGAGCAGCAGAAGGCCAAGGGGAGCCCTAGAG	5	+	118716906-118716955		UI-H-FT2-bjj-o-11-0-UI.s1 NCI_CGAP_FT2 Homo sapiens cDNA clone UI-H-FT2-bjj-o-11-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002895.2	ILMN_522	RBL1	NM_002895.2	NM_002895.2		5933	34577078	NM_002895.2	RBL1	NP_002886.2	ILMN_1782745	0002900132	I	4088	GTACCACCGCCATTCAGAGTTGTCTCACCCCTTCTCGTGCCTTTTCTCTC	20	-	35626310-35626359	20q11.23b	Homo sapiens retinoblastoma-like 1 (p107) (RBL1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that modulates the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid [goid 43550] [pmid 16286473] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286473] [evidence IPI]	p107; PRB1; MGC40006; CP107	p107; PRB1; MGC40006; CP107
Homo sapiens	RefSeq	NM_006843.2	ILMN_22338	SDS	NM_006843.2	NM_006843.2		10993	33469957	NM_006843.2	SDS	NP_006834.2	ILMN_1811114	0000010068	S	1497	TTGAGGAACCATCTCAGCCATCCTCCCAGGAAGCCCACCCCTGACCCTTA	12	-	113830308-113830357	12q24.13b	Homo sapiens serine dehydratase (SDS), mRNA.		The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	SDH	SDH
Homo sapiens	RefSeq	NM_033164.1	ILMN_1423	FGF8	NM_033164.1	NM_033164.1		2253	15147347	NM_033164.1	FGF8	NP_149354.1	ILMN_1812517	0000070091	A	897	GCCAGACCGCAGAGAGGCTCATCCTGTAGGGCACCCAAAACTCAAGCAAG	10	-	103520001-103520050	10q24.32a	Homo sapiens fibroblast growth factor 8 (androgen-induced) (FGF8), transcript variant E, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9139660] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1697263] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8700553] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8661131] [evidence TAS]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [pmid 8700553] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence NAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 8595889] [evidence TAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence NAS]	HBGF-8; AIGF; MGC149376	MGC149376; HBGF-8; AIGF
Homo sapiens	RefSeq	NR_031658.1	ILMN_388586	MIR1257	NR_031658.1	NR_031658.1		100302168	269847312	NR_031658.1	MIR1257		ILMN_3311055	0006330022	S	7	GCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCCATGCACCCCTGT					Homo sapiens microRNA 1257 (MIR1257), microRNA.					
Homo sapiens	RefSeq	NM_001031733.2	ILMN_11046	CALML4	NM_001031733.2	NM_001031733.2		91860	110227595	NM_001031733.2	CALML4	NP_001026903.2	ILMN_2413599	0002940750	A	2915	AGAGGGCCGGTTAGATGCTGGCCCCGCCGAGAGAACTGCTGTCACTTTCA	15	-	68484572-68484621	15q23a	Homo sapiens calmodulin-like 4 (CALML4), transcript variant 2, mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	NY-BR-20; MGC4809	NY-BR-20; MGC4809
Homo sapiens	RefSeq	NM_033429.1	ILMN_11046	CALML4	NM_001031733.2	NM_001031733.2		91860	110227595	NM_001031733.2	CALML4	NP_001026903.2	ILMN_1815707	0001030433	I	4025	CAGCAGCACACTCTGGGACCACCAGCTATTTTCCCTCTCTTTCTGAAATC	15	-	68483462-68483511	15q23a	Homo sapiens calmodulin-like 4 (CALML4), transcript variant 2, mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	NY-BR-20; MGC4809	NY-BR-20; MGC4809
Homo sapiens	RefSeq	XM_933839.1	ILMN_31961	LOC646716	XM_933839.1	XM_933839.1		646716	89056965	XM_933839.1	LOC646716	XP_938932.1	ILMN_1674870	0004280324	S	302	TAGTAAGCCCACCTCCGCTGGCCTTCAGAATCCCACCCGGACCAGCTGAG	19	-	61607322-61607371		PREDICTED: Homo sapiens hypothetical protein LOC646716 (LOC646716), mRNA.					
Homo sapiens	RefSeq	XR_016251.2	ILMN_169806	LOC642590	XR_016251.2	XR_016251.2		642590	169169403	XR_016251.2	LOC642590		ILMN_3200921	0005690291	A	1187	CGATCAATAGCCCCTAATCACATGTGCTGCAAATAGCCTTCCTGACCTCC	6	-	71374607-71374656	6q13a	PREDICTED: Homo sapiens misc_RNA (LOC642590), miscRNA.					
Homo sapiens	Unigene	Hs.573792	ILMN_125973	HS.573792	Hs.573792		Hs.573792		22658352	BC031234			ILMN_1892573	0005890240	S	1468	CATGAGCAGGACTGCCTTGGAGCCAACTCACAGCTGAGCTTCCTACCTGG	1	+	175945893-175945942		Homo sapiens cDNA clone IMAGE:4838218					
Homo sapiens	RefSeq	NM_005159.3	ILMN_19539	ACTC1	NM_005159.4	NM_005159.4		70	113722123	NM_005159.4	ACTC1	NP_005150.1	ILMN_1658660	0004260201	S	1171	GGTATTGCTGATCGTATGCAGAAGGAAATCACTGCTCTGGCTCCTAGCAC	15	-	35083327-35083376	15q14a	Homo sapiens actin, alpha, cardiac muscle 1 (ACTC1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence ISS]; The actin part of any complex of actin, myosin, and accessory proteins [goid 42643] [pmid 16611632] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISS]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [pmid 16611632] [evidence IDA]; Formation of the actin-based thin filaments of myofibrils [goid 30240] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence ISS]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence ISS]; The process by which the anatomical structures of cardiac muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 55008] [evidence ISS]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [pmid 17947298] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [pmid 9563954] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [pmid 17611253] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16611632] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 16611632] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 17765196] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [pmid 16611632] [evidence IPI]	ACTC; CMD1R	CMD1R
Homo sapiens	RefSeq	Hs.532645	ILMN_19539	ACTC1	NM_005159.4	NM_005159.4		70	113722123	NM_005159.4	ACTC1	NP_005150.1	ILMN_1829919	0006940739	S	3396	CTAATCACAGATGGAAAGAACCAGAGGTGATACCCCAGCCAATCATCTAC	15	-	35080544-35080593	15q14a	Homo sapiens actin, alpha, cardiac muscle 1 (ACTC1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A region of a sarcomere that appears as a light band on each side of the Z disc, comprising a region of the sarcomere where thin (actin) filaments are not overlapped by thick (myosin) filaments; contains actin, troponin, and tropomyosin; each sarcomere includes half of an I band at each end [goid 31674] [evidence ISS]; The actin part of any complex of actin, myosin, and accessory proteins [goid 42643] [pmid 16611632] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence ISS]; Movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins [goid 30048] [pmid 16611632] [evidence IDA]; Formation of the actin-based thin filaments of myofibrils [goid 30240] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence ISS]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [evidence ISS]; The process by which the anatomical structures of cardiac muscle are generated and organized. Morphogenesis pertains to the creation of form [goid 55008] [evidence ISS]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [pmid 17947298] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [pmid 9563954] [evidence IMP]; The multicellular organismal process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 60047] [pmid 17611253] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16611632] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 16611632] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 17765196] [evidence IDA]; Interacting selectively with any part of a myosin complex; myosins are any of a superfamily of molecular motor proteins that bind to actin and use the energy of ATP hydrolysis to generate force and movement along actin filaments [goid 17022] [pmid 16611632] [evidence IPI]	ACTC; CMD1R	
Homo sapiens	RefSeq	NM_014302.3	ILMN_2661	SEC61G	NM_014302.3	NM_014302.3		23480	60279263	NM_014302.3	SEC61G	NP_055117.1	ILMN_2367020	0006290367	A	110	GCAGTTTGTTGAGCCAAGTCGGCAGTTTGTAAAGGACTCCATTCGGCTGG	7	-	54825217-54825266	7p11.2c	Homo sapiens Sec61 gamma subunit (SEC61G), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	SSS1	SSS1
Homo sapiens	RefSeq	XR_040053.1	ILMN_352517	LOC440461	XR_040053.1	XR_040053.1		440461	169211521	XR_040053.1	LOC440461		ILMN_3296002	0000130129	M	1192	TGCTGCAGAAATGCAAATGAGCTCGATGACCGGCTGCTGCCCCAAGCCCT				17q24.2c	PREDICTED: Homo sapiens misc_RNA (LOC440461), miscRNA.					
Homo sapiens	Unigene	Hs.578359	ILMN_130540	HS.578359	Hs.578359		Hs.578359		14344996	BG945625			ILMN_1854196	0005080470	S	384	GGCCAAGGCTGATTGGAAGATGCTCCTGGGGAGAGATGACGTGGGGATTA	14	+	75799447-75799496		MR1-KN0008-300101-003-a07 KN0008 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_017595.4	ILMN_1324	NKIRAS2	NM_017595.4	NM_017595.4		28511	40316921	NM_017595.4	NKIRAS2	NP_060065.2	ILMN_1699778	0001410445	I	16	CCTGGAGGAGCCTACACCGACTCTGGAGGAAGACTGGAGCCTTTGCGGCG	17	+	37425633-37425682	17q21.2b	Homo sapiens NFKB inhibitor interacting Ras-like 2 (NKIRAS2), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 10657303] [evidence NAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10657303] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	KBRAS2; MGC74742; kappaB-Ras2; DKFZP434N1526	KBRAS2; MGC74742; kappaB-Ras2; DKFZP434N1526
Homo sapiens	RefSeq	NM_017595.4	ILMN_1324	NKIRAS2	NM_017595.4	NM_017595.4		28511	40316921	NM_017595.4	NKIRAS2	NP_060065.2	ILMN_1653404	0006980164	A	2204	GAGGGTGGGCACACACCCAGCGGCCTGCAGAGTAAGCTTATTACCCACAA	17	+	37430920-37430969	17q21.2b	Homo sapiens NFKB inhibitor interacting Ras-like 2 (NKIRAS2), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 10657303] [evidence NAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10657303] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	KBRAS2; MGC74742; kappaB-Ras2; DKFZP434N1526	KBRAS2; MGC74742; kappaB-Ras2; DKFZP434N1526
Homo sapiens	RefSeq	XR_037376.1	ILMN_345346	LOC731602	XR_037376.1	XR_037376.1		731602	169207539	XR_037376.1	LOC731602		ILMN_3243953	0007160524	S	92	AAGCTTGGCACGAGGCTGGAAGATGGTGCCCCGGCCTTGGAGTGGCTCCC					PREDICTED: Homo sapiens misc_RNA (LOC731602), miscRNA.					
Homo sapiens	RefSeq	NM_138374.1	ILMN_370227	ZNF845	NM_138374.1	NM_138374.1		91664	210031218	NM_138374.1	ZNF845	NP_612383.1	ILMN_3237579	0006270192	S	3907	GTTTGAGACCAGACTGGCCAACAGACATGAGTCACTTTTCCCACCCTGTA	19	+	53857718-53857767	19q13.41b	Homo sapiens zinc finger protein 845 (ZNF845), mRNA. XM_039908	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_938008.1	ILMN_138021	HSPBP1	XM_938008.1	XM_938008.1		23640	89057639	XM_938008.1	HSPBP1	XP_943101.1	ILMN_1804791	0000160600	I	980	GAGGCATCTCCTTCCCTCGTTTGTTCCCATGCTTGTTGGACCCCTGCACG				19q13.42b	PREDICTED: Homo sapiens hsp70-interacting protein (HSPBP1), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9830037] [evidence TAS]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [pmid 9830037] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]		
Homo sapiens	RefSeq	XM_942810.1	ILMN_32406	LOC647360	XM_942810.1	XM_942810.1		647360	89040688	XM_942810.1	LOC647360	XP_947903.1	ILMN_1794020	0002450204	S	316	ATGGCTGCTCGCCCAGGGGCTGCTGCAACATCAACGTCCCTGGAACAAAG					PREDICTED: Homo sapiens hypothetical protein LOC647360 (LOC647360), mRNA.					
Homo sapiens	RefSeq	NM_014690.2	ILMN_20985	KIAA0773	NM_014690.2	NM_014690.2		9715	40254853	NM_014690.2	KIAA0773	NP_055505.2	ILMN_1736127	0000730386	A	5706	GAGATTATGTACACAAGGGCATGGGCTCAAATGCCCACTGCCAGTCCCCC	7	-	142760717-142760766	7q34f	Homo sapiens KIAA0773 gene product (KIAA0773), mRNA.					
Homo sapiens	RefSeq	NM_014690.2	ILMN_20985	KIAA0773	NM_014690.2	NM_014690.2		9715	40254853	NM_014690.2	KIAA0773	NP_055505.2	ILMN_1752280	0006960133	I	1136	TGGGAGGACACACCCAACTCCTTGCTATCCAACTCCTGCCTCGATTCCCA	7	-	142767832-142767881	7q34f	Homo sapiens KIAA0773 gene product (KIAA0773), mRNA.					
Homo sapiens	RefSeq	NR_003713.1	ILMN_351996	LOC728613	NR_003713.1	NR_003713.1		728613	157266267	NR_003713.1	LOC728613		ILMN_3238941	0001500520	S	2327	GGTGAAAGCGACTCACAATCTGGTTGGGGAAAGTGGAGAAAACAGACATG	5	-	1650871-1650920	5p15.33d	Homo sapiens programmed cell death 6 pseudogene (LOC728613), non-coding RNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	NM_001077516.1	ILMN_171934	SLC39A7	NM_001077516.1	NM_001077516.1		7922	117553618	NM_001077516.1	SLC39A7	NP_001070984.1	ILMN_2383077	0000460021	A	2089	CTGTGTTTGAATCGAGGGGGAGGGGTGGTAACCGGAAATAAAGACCTCCG	6	+	33172152-33172201	6p21.32a	Homo sapiens solute carrier family 39 (zinc transporter), member 7 (SLC39A7), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8812499] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	ZIP7; KE4; D6S115E; RING5; HKE4; D6S2244E; H2-KE4	ZIP7; KE4; D6S115E; RING5; HKE4; D6S2244E; H2-KE4
Homo sapiens	RefSeq	NM_014912.3	ILMN_171090	CPEB3	NM_014912.3	NM_014912.3		22849	50345880	NM_014912.3	CPEB3	NP_055727.3	ILMN_2171783	0002750414	S	5505	CTTTAAGGAGTGCTTTCTCAATCATTAATAGAGTTGTTTCTGGGAGGGAC	10	-	93810726-93810775	10q23.32b	Homo sapiens cytoplasmic polyadenylation element binding protein 3 (CPEB3), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		
Homo sapiens	RefSeq	NM_152602.1	ILMN_169447	ZNF433	NM_001080411.1	NM_001080411.1		163059	122937216	NM_001080411.1	ZNF433	NP_001073880.1	ILMN_1718950	0002600674	S	2158	GTGCATGGAAGGGCTCACTGCATAGACACCCCATAACCCCAGGCTTTAGG	19	-	12125645-12125659:12125660-12125694	19p13.2a	Homo sapiens zinc finger protein 433 (ZNF433), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ40981	FLJ40981
Homo sapiens	RefSeq	NM_001018009.1	ILMN_8371	SH3BP5	NM_001018009.1	NM_001018009.1		9467	65508153	NM_001018009.1	SH3BP5	NP_001018009.1	ILMN_1814773	0005670711	A	2755	TCTAGGCAACCCTTTTTCCATAAGGAAGAGCATGGAGTGCTGTGGTCACC	3	-	15271262-15271311	3p24.3e	Homo sapiens SH3-domain binding protein 5 (BTK-associated) (SH3BP5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9571151] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10339589] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [pmid 10339589] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9571151] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	SAB	SAB
Homo sapiens	RefSeq	NM_004019.1	ILMN_4202	DMD	NM_004019.1	NM_004019.1		1756	5032304	NM_004019.1	DMD	NP_004010.1	ILMN_2373106	0003870598	A	1019	CCAAAAGGTATTTTGCGAAGCATCCCCGAATGGGCTACCTGCCAGTGCAG	X	-	31106735-31106784	Xp21.2a-p21.1d	Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp40, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 2261642] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 3282674] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 10867799] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 8282811] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [pmid 7545544] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [pmid 16000376] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 2261642] [evidence ISS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 1824797] [evidence NAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [pmid 16000376] [evidence IDA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 2261642] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 12376554] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 3282674] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16000376] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 16000376] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 3287171] [evidence TAS]; Interacting selectively with the enzyme nitric-oxide synthase [goid 50998] [pmid 7545544] [evidence ISS]	DXS272; DXS269; DXS230; DXS268; DXS270; DXS239; DXS142; DXS206; CMD3B; DXS164; BMD	DXS272; DXS269; DXS268; DXS270; DXS239; DXS142; DXS206; DXS230; CMD3B; DXS164; BMD
Homo sapiens	RefSeq	NM_004019.1	ILMN_4202	DMD	NM_004019.1	NM_004019.1		1756	5032304	NM_004019.1	DMD	NP_004010.1	ILMN_1761812	0006290129	I	1147	CTCCTCTCAGCTGAACACCCTCCTTTCACTCCCAAATGCAAACAGTCTCT	X	-	31106607-31106656	Xp21.2a-p21.1d	Homo sapiens dystrophin (muscular dystrophy, Duchenne and Becker types) (DMD), transcript variant Dp40, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 2261642] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 3282674] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 10867799] [evidence IDA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 8282811] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A specialized region of connection between a cell and the extracellular matrix [goid 30055] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [pmid 7545544] [evidence IDA]; Regular periodic sub membranous arrays of vinculin in skeletal and cardiac muscle cells, these arrays link Z-discs to the sarcolemma and are associated with links to extracellular matrix [goid 43034] [pmid 16000376] [evidence IDA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 2261642] [evidence ISS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 1824797] [evidence NAS]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [pmid 16000376] [evidence IDA]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]; The cellular homeostatic process by which a muscle fiber is preserved in a stable functional or structural state [goid 46716] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 2261642] [evidence ISS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 12376554] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 3282674] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16000376] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 16000376] [evidence IDA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 3287171] [evidence TAS]; Interacting selectively with the enzyme nitric-oxide synthase [goid 50998] [pmid 7545544] [evidence ISS]	DXS272; DXS269; DXS230; DXS268; DXS270; DXS239; DXS142; DXS206; CMD3B; DXS164; BMD	DXS272; DXS269; DXS268; DXS270; DXS239; DXS142; DXS206; DXS230; CMD3B; DXS164; BMD
Homo sapiens	RefSeq	NM_080792.1	ILMN_166179	SIRPA	NM_001040023.1	NM_001040023.1		140885	91105766	NM_001040023.1	SIRPA	NP_001035112.1	ILMN_1758146	0001940129	S	3940	GAACCCCAGGAAAAGGAAGAGGTCGAACCAACCCTGCGGAAGGAGCATGG	20	+	1868371-1868420	20p13d	Homo sapiens signal-regulatory protein alpha (SIRPA), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16691243] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9070220] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9070220] [evidence TAS]	Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	SIRPalpha2; BIT; SHPS1; MFR; SIRP; SHPS-1; CD172A; SIRP-ALPHA-1; SIRPalpha; PTPNS1; P84; MYD-1	SIRPalpha2; BIT; SHPS1; MFR; SIRP; SHPS-1; CD172A; SIRP-ALPHA-1; SIRPalpha; SIRPA; P84; MYD-1
Homo sapiens	RefSeq	NM_012345.1	ILMN_13600	NUFIP1	NM_012345.1	NM_012345.1		26747	6912541	NM_012345.1	NUFIP1	NP_036477.1	ILMN_1813800	0003850521	S	2385	CCTCTCCAGAATCTTGGAACACCTGGCATGTGACCCTAGTGACGTCACAG	13	-	44412394-44412443	13q14.12a	Homo sapiens nuclear fragile X mental retardation protein interacting protein 1 (NUFIP1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Structures of variable diameter visible in the nucleoplasm by electron microscopy, mainly observed near the border of condensed chromatin. The fibrils are enriched in RNA, and are believed to be sites of pre-mRNA splicing and polyadenylylation representing the in situ form of nascent transcripts [goid 5726] [pmid 12941608] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 12941608] [evidence IDA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [pmid 15107825] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 12941608] [evidence IDA]; A ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22626] [pmid 12941608] [evidence IDA]; A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, synaptic vesicles, and a specialized cortical cytoskeletal matrix [goid 48786] [pmid 12941608] [evidence IDA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 10556305] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 15107825] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 15107825] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10556305] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15107825] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10556305] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15107825] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NUFIP	NUFIP
Homo sapiens	RefSeq	NM_001004312.1	ILMN_13255	RTP2	NM_001004312.1	NM_001004312.1		344892	51972197	NM_001004312.1	RTP2	NP_001004312.1	ILMN_1776146	0000130427	S	1023	TCTTCGCTGGTGCCTCTTCTGGGCCTCTCTCTGCCTGCTCGTTGTTTACC	3	-	188899014-188899063	3q27.3c	Homo sapiens receptor (chemosensory) transporter protein 2 (RTP2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 15550249] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which a protein is incorporated into a biological membrane [goid 51205] [pmid 15550249] [evidence IDA]	Interacting selectively with an olfactory receptor [goid 31849] [pmid 15550249] [evidence IMP]	MGC78665	MGC78665
Homo sapiens	RefSeq	NM_198239.1	ILMN_14801	WISP3	NM_198239.1	NM_198239.1		8838	38202240	NM_198239.1	WISP3	NP_937882.1	ILMN_1755631	0000520717	I	118	GCTTTGTGTACCCGGAGCAATGAACAAGCGGCGACTTCTCTACCCCTCAG	6	+	112375488-112375506:112375507-112375537	6q21i	Homo sapiens WNT1 inducible signaling pathway protein 3 (WISP3), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9843955] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9843955] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9843955] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	PPD; CCN6; MGC125987; LIBC; PPAC; MGC125989; MGC125988	LIBC; PPAC; PPD; CCN6; MGC125987; MGC125989; MGC125988
Homo sapiens	RefSeq	XM_940727.1	ILMN_40771	LOC651552	XM_940727.1	XM_940727.1		651552	89042601	XM_940727.1	LOC651552	XP_945820.1	ILMN_1684311	0005290563	S	746	TCATATCAGCAGGTTCCATAGGGCTGACTGCAGGATTTGGGCATCCACAG					PREDICTED: Homo sapiens similar to fetal Alzheimer antigen isoform 2 (LOC651552), mRNA.					
Homo sapiens	RefSeq	NM_003701.2	ILMN_10321	TNFSF11	NM_003701.2	NM_003701.2		8600	14790148	NM_003701.2	TNFSF11	NP_003692.1	ILMN_1695900	0002030215	I	319	CTGGGGCTGGGCCAGGTTGTCTGCAGCGTCGCCCTGTTCTTCTATTTCAG	13	+	42046607-42046656	13q14.11c	Homo sapiens tumor necrosis factor (ligand) superfamily, member 11 (TNFSF11), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10708588] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9568710] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9312132] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9312132] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [pmid 17241109] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone resorption [goid 45780] [pmid 17241109] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 9568710] [evidence NAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [pmid 9367155] [evidence NAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [pmid 9312132] [evidence NAS]	RANKL; hRANKL2; ODF; OPGL; CD254; sOdf; OPTB2; TRANCE	RANKL; hRANKL2; ODF; OPGL; CD254; sOdf; OPTB2; TRANCE
Homo sapiens	RefSeq	NM_003701.2	ILMN_10321	TNFSF11	NM_003701.2	NM_003701.2		8600	14790148	NM_003701.2	TNFSF11	NP_003692.1	ILMN_1673175	0004250762	A	1722	CTGGTGCACTTTGTAAATTCCCTGGGGAAAACTTGCAGCTAAGGAGGGGA	13	+	42079671-42079720	13q14.11c	Homo sapiens tumor necrosis factor (ligand) superfamily, member 11 (TNFSF11), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10708588] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9568710] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9312132] [evidence NAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9312132] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoclast differentiation [goid 45672] [pmid 17241109] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone resorption [goid 45780] [pmid 17241109] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 9568710] [evidence NAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [pmid 9367155] [evidence NAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [pmid 9312132] [evidence NAS]	RANKL; hRANKL2; ODF; OPGL; CD254; sOdf; OPTB2; TRANCE	RANKL; hRANKL2; ODF; OPGL; CD254; sOdf; OPTB2; TRANCE
Homo sapiens	RefSeq	XR_016479.2	ILMN_180374	LOC389740	XR_016479.2	XR_016479.2		389740	169177393	XR_016479.2	LOC389740		ILMN_3235198	0004540411	S	945	ATATAAGGACAAAAAAGGCACAGCTCTGCAGACACCCAAGAGAAGCTGGC	9	-	66256138-66256177:66256449-66256458	9q12g	PREDICTED: Homo sapiens misc_RNA (LOC389740), miscRNA.					
Homo sapiens	RefSeq	NR_024321.1	ILMN_370234	NCRNA00115	NR_024321.1	NR_024321.1		79854	210147512	NR_024321.1	NCRNA00115		ILMN_3237598	0006370725	S	906	GCAGAGAGGGCAGCAGAAGCCTAATTCCCAAATTCCTTAGTGGTTTTCTG	1	-	761947-761996	1p36.33b	Homo sapiens non-protein coding RNA 115 (NCRNA00115), non-coding RNA.					
Homo sapiens	RefSeq	NM_032488.2	ILMN_22539	CNFN	NM_032488.2	NM_032488.2		84518	26024194	NM_032488.2	CNFN	NP_115877.2	ILMN_1803838	0007570494	S	405	TCCCCGTCCTTTTCCACCAGTCTCGCCTCTGGCCTTCTCTGGCCACTCCT	19	-	47583079-47583128	19q13.2c	Homo sapiens cornifelin (CNFN), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [pmid 15147942] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		PLAC8L2	PLAC8L2
Homo sapiens	RefSeq	XR_041326.1	ILMN_338194	LOC389607	XR_041326.1	XR_041326.1		389607	169172355	XR_041326.1	LOC389607		ILMN_3307102	0005560176	A	897	GGCTGGGGTTGAAGGCAGTGCTCGTGTTCATGGCCCTTTCACTACGTCTG				8p23.3b	PREDICTED: Homo sapiens hypothetical LOC389607 (LOC389607), miscRNA.					
Homo sapiens	RefSeq	NM_019044.2	ILMN_139328	FLJ10996	NM_019044.2	NM_019044.2		54520	21361622	NM_019044.2	FLJ10996	NP_061917.2	ILMN_1694269	0002850392	S	2565	GATCAGCCCATGTAGTGTTGGTCACTTGGGCCTTTCACCTGCCATGGTAC	2	-	118393811-118393860	2q14.1d	Homo sapiens hypothetical protein FLJ10996 (FLJ10996), mRNA.				MGC13033	MGC13033
Homo sapiens	RefSeq	XM_929793.1	ILMN_164044	LOC729985	XM_001131964.1	XM_001131964.1		729985	113413242	XM_001131964.1	LOC729985	XP_001131964.1	ILMN_1710220	0005360592	S	205	GAGGAGATGGAAGTAGCCATGCAGAAAGCTGACATGATGTGGCAGGAGAT	2	+	130678365-130678414	2q21.1b	PREDICTED: Homo sapiens similar to CDC42-binding protein kinase beta (LOC729985), mRNA.					
Homo sapiens	RefSeq	XM_928878.1	ILMN_41779	LOC392364	XM_928878.1	XM_928878.1		392364	89029874	XM_928878.1	LOC392364	XP_933971.1	ILMN_1730590	0005310039	S	546	GCTGTGTTTTCTCCCTCAGAACACGGGCACCCCACTGAGGGTCCTGCCTT	9	-	89663739-89663788	9q22.1a	PREDICTED: Homo sapiens similar to nuclear pore membrane protein 121 (LOC392364), mRNA.					
Homo sapiens	RefSeq	NM_004864.1	ILMN_2688	GDF15	NM_004864.1	NM_004864.1		9518	4758935	NM_004864.1	GDF15	NP_004855.1	ILMN_2188862	0005090671	S	894	CCGGGGTGTCGCTCCAGACCTATGATGACTTGTTAGCCAAAGACTGCCAC	19	+	18360697-18360745:18360746-18360746	19p13.11c	Homo sapiens growth differentiation factor 15 (GDF15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9326641] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9326641] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 9348093] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9326641] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 9326641] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	PTGFB; GDF-15; PDF; NAG-1; MIC1; PLAB; MIC-1	GDF-15; NAG-1; PTGFB; PDF; MIC1; PLAB; MIC-1
Homo sapiens	RefSeq	NM_138779.2	ILMN_8559	C13ORF27	NM_138779.2	NM_138779.2		93081	34222136	NM_138779.2	C13orf27	NP_620134.2	ILMN_1682774	0001850068	S	724	CACTGGATTGAGAAGGCAAATCATTCCATGGCAGTGAAAGGACGGTCGAC	13	-	102216833-102216882	13q33.1b	Homo sapiens chromosome 13 open reading frame 27 (C13orf27), mRNA.					
Homo sapiens	RefSeq	NM_031862.1	ILMN_15393	NBR1	NM_031862.1	NM_031862.1		4077	14110380	NM_031862.1	NBR1	NP_114068.1	ILMN_1805266	0007320427	I	4605	TTGTACATAACCACCTTAAGAATGGTGAAATAAATGTTCTTGGAAATTCC				17q21.31a	Homo sapiens neighbor of BRCA1 gene 1 (NBR1), transcript variant 3, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0049; MIG19; M17S2	KIAA0049; MIG19; M17S2
Homo sapiens	RefSeq	XM_932008.1	ILMN_33639	LOC644126	XM_932008.1	XM_932008.1		644126	88954212	XM_932008.1	LOC644126	XP_937101.1	ILMN_1708664	0000050674	S	778	GGTGCCACGCGCCAGAGTCAATTTCCGCCCAACACCACGACTGTTACTCT	2	+	241012145-241012186:241015365-241015372		PREDICTED: Homo sapiens hypothetical protein LOC644126 (LOC644126), mRNA.					
Homo sapiens	RefSeq	NM_020197.1	ILMN_4244	SMYD2	NM_020197.1	NM_020197.1		56950	9910273	NM_020197.1	SMYD2	NP_064582.1	ILMN_1721605	0005960053	A	1203	GCCTGGAACACAAAGCCGCAGGGGAGAAAGCCCTGAAGAAGGCCATTGCA	1	+	212574234-212574274:212576670-212576678	1q41a	Homo sapiens SET and MYND domain containing 2 (SMYD2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSKM-B; MGC119305; ZMYND14; KMT3C	HSKM-B; MGC119305; ZMYND14; KMT3C
Homo sapiens	RefSeq	XM_001725601.1	ILMN_352497	LOC282992	XM_001725601.1	XM_001725601.1		282992	169188830	XM_001725601.1	LOC282992	XP_001725653.1	ILMN_3295970	0005130315	M	37	CAGGTAAACGATTTTGGCAGTGCCCGGAGAAAGATAGAAGGGCCTCTCTC	10	+	102987792-102987794:102987978-102988013:102988267-102988277	10q24.31a	PREDICTED: Homo sapiens hypothetical protein LOC282992 (LOC282992), mRNA.					
Homo sapiens	RefSeq	NM_022465.2	ILMN_21768	IKZF4	NM_022465.3	NM_022465.3		64375	122891863	NM_022465.3	IKZF4	NP_071910.3	ILMN_1741334	0005550608	S	4666	TGTGCCCATGAGAGCAGAGACTGGAAGGGCAAGACCAGGTGCTAAGGAGG	12	+	54717701-54717750	12q13.2c	Homo sapiens IKAROS family zinc finger 4 (Eos) (IKZF4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10978333] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10978333] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10978333] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1782; EOS; ZNFN1A4	KIAA1782; EOS
Homo sapiens	RefSeq	NM_080545.1	ILMN_12968	AP1G2	NM_080545.1	NM_080545.1		8906	18104995	NM_080545.1	AP1G2	NP_536806.1	ILMN_2276598	0003130215	I	591	TGGGCGCGGAATTTGGAGACCCACTTCGGGAAAGGTAAAATGCGGGCGCA	14	-	23106479-23106528	14q11.2g	Homo sapiens adaptor-related protein complex 1, gamma 2 subunit (AP1G2), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9762922] [evidence TAS]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [pmid 9762922] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of beta1, gamma1, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network [goid 30121] [pmid 9733768] [evidence TAS]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 9733768] [evidence IDA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 9733768] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	G2AD	G2AD
Homo sapiens	RefSeq	NM_015339.2	ILMN_27197	ADNP	NM_015339.2	NM_015339.2		23394	31563504	NM_015339.2	ADNP	NP_056154.1	ILMN_1666019	0001770551	I	249	GTGGCCTAGTGGTTATGCCCTGTACTACCATTTTGAGGATCTGGACTCCG	20	-	49545229-49545278	20q13.13f	Homo sapiens activity-dependent neuroprotector homeobox (ADNP), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADNP1; KIAA0784	ADNP1; KIAA0784
Homo sapiens	RefSeq	XM_940433.1	ILMN_32136	LOC651302	XM_940433.2	XM_940433.2		651302	113417962	XM_940433.2	LOC651302	XP_945526.1	ILMN_1714510	0002120082	S	1462	GTCATCTGGGTGGAGGACACCCTTTTGGGATCAGCACTGAAAGTGACGCC					PREDICTED: Homo sapiens similar to Zinc finger protein 192 (LD5-1) (LOC651302), mRNA.					
Homo sapiens	RefSeq	XM_001714545.1	ILMN_335443	LOC645321	XM_001714545.1	XM_001714545.1		645321	169212743	XM_001714545.1	LOC645321	XP_001714597.1	ILMN_3199634	0005270288	A	975	AGGAGGGTCATAGAGGAAGGGAGGGCGCAGGTTGGAGTCAGGTCCAAACA	18	-	74839357-74839406	18q23c	PREDICTED: Homo sapiens hypothetical LOC645321 (LOC645321), mRNA.					
Homo sapiens	RefSeq	XM_001714545.1	ILMN_335443	LOC645321	XM_001714545.1	XM_001714545.1		645321	169212743	XM_001714545.1	LOC645321	XP_001714597.1	ILMN_3276108	0003710670	M	38	TCCAGCGGACTCCGGCGGCCTATGCAAATGAGGCCGCGCTCGCAATTAGC	18	-	74841014-74841063	18q23c	PREDICTED: Homo sapiens hypothetical LOC645321 (LOC645321), mRNA.					
Homo sapiens	RefSeq	XM_931879.1	ILMN_38817	LOC643882	XM_931879.1	XM_931879.1		643882	89035399	XM_931879.1	LOC643882	XP_936972.1	ILMN_1746919	0004200670	S	1616	CTACTCGGGAGACTGAGGCAGGAAAATCACTTGAACTCGGGAGGCAGAGA	12	+	8382616-8382665		PREDICTED: Homo sapiens hypothetical protein LOC643882 (LOC643882), mRNA.					
Homo sapiens	RefSeq	XM_001716820.1	ILMN_351126	LOC729809	XM_001716820.1	XM_001716820.1		729809	169209016	XM_001716820.1	LOC729809	XP_001716872.1	ILMN_3305876	0006400543	M	6	TTCGTGCTCTCCACAGCAGGCCAGCAAGGCCGAGGAGAATGGTTCCAACA				15q24.2a	PREDICTED: Homo sapiens hypothetical LOC729809 (LOC729809), mRNA.					
Homo sapiens	RefSeq	NM_033106.1	ILMN_23928	GALP	NM_033106.2	NM_033106.2		85569	141801822	NM_033106.2	GALP	NP_149097.1	ILMN_1746352	0005490114	S	864	CACATGAGTCTCCTCGAGAAGTGAGGAGAGGCAGTTTGGAGCAGAATGGA	19	+	61388882-61388931	19q13.42c	Homo sapiens galanin-like peptide (GALP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]		
Homo sapiens	Unigene	Hs.30495	ILMN_72234	HS.30495	Hs.30495		Hs.30495		9511535	BE465760			ILMN_1826853	0006100470	S	411	CAGTAGCAGAATTGGTCACACCTGTTAGATtctcagcctcctcctttgtc	18	+	46575920-46575969		hw22f09.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:3183689 3, mRNA sequence					
Homo sapiens	RefSeq	XM_933205.1	ILMN_32761	LOC645850	XM_933205.1	XM_933205.1		645850	88942772	XM_933205.1	LOC645850	XP_938298.1	ILMN_1691405	0002750438	S	1766	CAGGTCATGTGCCAGGTAGCTGGGAAATGAATACTTCTATTTTCTATTCT	1	-	60898413-60898462		PREDICTED: Homo sapiens hypothetical protein LOC645850 (LOC645850), mRNA.					
Homo sapiens	RefSeq	NM_054030.2	ILMN_17471	MRGPRX2	NM_054030.2	NM_054030.2		117194	40255006	NM_054030.2	MRGPRX2	NP_473371.1	ILMN_2155932	0000650433	S	1845	CTTCCCTCTCTGGGGGCTCTCTAATTCGTCCTGGAAGTTTCCAGTGGTCT	11	-	19076143-19076192	11p15.1c	Homo sapiens MAS-related GPR, member X2 (MRGPRX2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12915402] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [pmid 12915402] [evidence NAS]; Any process by which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain [goid 30431] [pmid 12915402] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively and stoichiometrically with neuropeptides, peptides with direct synaptic effects (peptide neurotransmitters) or indirect modulatory effects on the nervous system (peptide neuromodulators) [goid 42923] [pmid 12915402] [evidence IPI]	MRGX2	MRGX2
Homo sapiens	RefSeq	NM_054030.2	ILMN_17471	MRGPRX2	NM_054030.2	NM_054030.2		117194	40255006	NM_054030.2	MRGPRX2	NP_473371.1	ILMN_1794589	0001430414	S	1244	CAGTGTCTCTGGAACTGCCTTACTCACAGGCTTCCACCACAGCCCTATGA	11	-	19076744-19076793	11p15.1c	Homo sapiens MAS-related GPR, member X2 (MRGPRX2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12915402] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [pmid 12915402] [evidence NAS]; Any process by which an organism enters and maintains a periodic, readily reversible state of reduced awareness and metabolic activity. Usually accompanied by physical relaxation, the onset of sleep in humans and other mammals is marked by a change in the electrical activity of the brain [goid 30431] [pmid 12915402] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively and stoichiometrically with neuropeptides, peptides with direct synaptic effects (peptide neurotransmitters) or indirect modulatory effects on the nervous system (peptide neuromodulators) [goid 42923] [pmid 12915402] [evidence IPI]	MRGX2	MRGX2
Homo sapiens	RefSeq	XM_945152.1	ILMN_173839	NGDN	NM_015514.1	NM_015514.1		25983	111038132	NM_015514.1	NGDN	NP_056329.1	ILMN_1690049	0002070730	A	383	CAGGCAGCCTTAGTGAGAATGACCCACTTCGTTTTAAGCCTCATCCCAGC	14	+	23014680-23014691:23014775-23014812	14q11.2g	Homo sapiens neuroguidin, EIF4E binding protein (NGDN), transcript variant 2, mRNA. XM_941350 XM_945161 XM_945163 XM_945166 XM_945170	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]		C14orf120; NGD; LCP5; lpd-2; DKFZP564O092	
Homo sapiens	RefSeq	NM_015514.1	ILMN_173839	NGDN	NM_015514.1	NM_015514.1		25983	111038132	NM_015514.1	NGDN	NP_056329.1	ILMN_2295879	0000940048	I	1146	CTCTGGATTCTGCCTCTAAGGTCCCACAGCTCCTGTTCAGGCTTCCCTAA	14	+	23016800-23016849	14q11.2g	Homo sapiens neuroguidin, EIF4E binding protein (NGDN), transcript variant 2, mRNA. XM_941350 XM_945161 XM_945163 XM_945166 XM_945170	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins [goid 32040] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]		C14orf120; NGD; LCP5; lpd-2; DKFZP564O092	C14orf120; NGD; LCP5; lpd-2; DKFZP564O092
Homo sapiens	RefSeq	NM_006690.3	ILMN_16467	MMP24	NM_006690.3	NM_006690.3		10893	73620939	NM_006690.3	MMP24	NP_006681.1	ILMN_1778333	0002060201	S	3933	CCTGGTCCCTGTCCACTCCTCAGGTTGGTGCTCTCACTTCTTGAAAGCTC	20	+	33327969-33328018	20q11.22b	Homo sapiens matrix metallopeptidase 24 (membrane-inserted) (MMP24), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10363975] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10363975] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 10363975] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [pmid 10363975] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MMP25; MT5-MMP; MT-MMP5	MMP25; MT5-MMP; MT-MMP5
Homo sapiens	RefSeq	NM_006771.3	ILMN_2163	KRT38	NM_006771.3	NM_006771.3		8687	15431317	NM_006771.3	KRT38	NP_006762.3	ILMN_1741544	0003170341	S	2704	CCATGATTCAGCCACACTGGCCTTTCTGTTCCTTGGACATGCCTGGAGAC	17	-	39592704-39592753	17q21.2b	Homo sapiens keratin 38 (KRT38), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9756910] [evidence TAS]	hHa8; HA8; KRTHA8	hHa8; HA8; KRTHA8
Homo sapiens	RefSeq	NM_007056.1	ILMN_12843	SFRS16	NM_007056.1	NM_007056.1		11129	5902129	NM_007056.1	SFRS16	NP_008987.1	ILMN_2146566	0002510722	S	1956	CGCAAGATCCGCATGAAGGAGCGGGAACGCCGAGAGAAGGAGAGAGAAGA	19	+	50264330-50264346:50265120-50265152	19q13.32a	Homo sapiens splicing factor, arginine/serine-rich 16 (SFRS16), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		SWAP2; CLASP; FLJ90109	SWAP2; CLASP; FLJ90109
Homo sapiens	RefSeq	NM_173541.2	ILMN_173097	C10ORF91	NM_173541.2	NM_173541.2		170393	91754188	NM_173541.2	C10orf91	NP_775812.1	ILMN_2183519	0007210291	S	633	CTCCGGGAGAAGGCAGAGGGCAGAGGCAGGAAACAAATCTCCTGTCAAAA	10	+	134111710-134111759	10q26.3e	Homo sapiens chromosome 10 open reading frame 91 (C10orf91), mRNA.				bA432J24.4; RP11-432J24.4	bA432J24.4; RP11-432J24.4
Homo sapiens	RefSeq	NM_172390.1	ILMN_26840	NFATC1	NM_006162.3	NM_006162.3		4772	27502384	NM_006162.3	NFATC1	NP_006153.2	ILMN_1729663	0005700026	A	2245	GTGGAGAAGCAGAGCACGGACAGCTATCCGGTCGTGGGCGGGAAGAAGAT	18	+	75312693-75312742	18q23d	Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8202141] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 14749367] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8702849] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 14749367] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9506523] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10821850] [evidence TAS]; Interacting selectively with the immunosuppressant FK506 [goid 5528] [pmid 8702849] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 14749367] [evidence IDA]	NFATc; MGC138448; NFAT2; NF-ATC	NFATc; MGC138448; NFAT2; NF-ATC
Homo sapiens	RefSeq	XM_930244.1	ILMN_40734	LOC644634	XM_930244.1	XM_930244.1		644634	88943476	XM_930244.1	LOC644634	XP_935337.1	ILMN_1770739	0005220626	S	837	ATGGGAGGCACAGTGGCCTGATGGAGCCTGAGGCAGCTAAACAAGCACTG	1	+	147943183-147943203:147943204-147943218:147943370-147943383	1q21.1e	PREDICTED: Homo sapiens hypothetical protein LOC644634 (LOC644634), mRNA.					
Homo sapiens	RefSeq	NM_206837.1	ILMN_14218	OSCP1	NM_206837.1	NM_206837.1		127700	45643130	NM_206837.1	OSCP1	NP_996668.1	ILMN_1719835	0005420289	A	502	GCGGCAGCTGACAGAAATATATGGTGGTCTCTCTGCAGGGGAGTTCCAGC	1	-	36897449-36897483:36898023-36898037	1p34.3d	Homo sapiens organic solute carrier partner 1 (OSCP1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		NOR1; MGC26685; OSCP1	NOR1; MGC26685; OSCP1
Homo sapiens	RefSeq	NM_206837.1	ILMN_14218	OSCP1	NM_206837.1	NM_206837.1		127700	45643130	NM_206837.1	OSCP1	NP_996668.1	ILMN_2273572	0003830400	I	648	GTTGCCTTCCAGGAGTGGGGAACTATATGGAGGACAGGAGAAGGAGACTG	1	-	36893977-36894026	1p34.3d	Homo sapiens organic solute carrier partner 1 (OSCP1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		NOR1; MGC26685; OSCP1	NOR1; MGC26685; OSCP1
Homo sapiens	RefSeq	NM_030674.2	ILMN_5532	SLC38A1	NM_030674.3	NM_030674.3		81539	117168274	NM_030674.3	SLC38A1	NP_109599.3	ILMN_1769911	0007320382	S	3359	CTCTGGTCTGAGTCAACTTTCGCTGGGGAAAACCTATGGAACCTACTGCA	12	-	46581916-46581965	12q13.11a	Homo sapiens solute carrier family 38, member 1 (SLC38A1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10891391] [evidence NAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells [goid 15804] [pmid 10891391] [evidence NAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + Na+(out) = amino acid(in) + Na+(in) [goid 5283] [pmid 10891391] [evidence NAS]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [pmid 10891391] [evidence NAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ATA1; SAT1; SNAT1; NAT2	ATA1; SAT1; SNAT1; NAT2
Homo sapiens	RefSeq	NM_030674.3	ILMN_5532	SLC38A1	NM_030674.3	NM_030674.3		81539	117168274	NM_030674.3	SLC38A1	NP_109599.3	ILMN_2266948	0002070687	I	836	TAAAAACCCCGGAAGGGCGGACACCTCCACATCGCCTTTTGCCACCTTTC	12	-	46662323-46662372	12q13.11a	Homo sapiens solute carrier family 38, member 1 (SLC38A1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10891391] [evidence NAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells [goid 15804] [pmid 10891391] [evidence NAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + Na+(out) = amino acid(in) + Na+(in) [goid 5283] [pmid 10891391] [evidence NAS]; Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [pmid 10891391] [evidence NAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ATA1; SAT1; SNAT1; NAT2	ATA1; SAT1; SNAT1; NAT2
Homo sapiens	RefSeq	XM_926091.1	ILMN_32099	LOC642615	XM_926091.1	XM_926091.1		642615	89060271	XM_926091.1	LOC642615	XP_931184.1	ILMN_1729689	0000360692	S	104	CAGGGGAAGACAGCTCCATGTATGTTAATACCCCAAAAGAACTTCCAGTG	X	-	145963555-145963604		PREDICTED: Homo sapiens hypothetical protein LOC642615 (LOC642615), mRNA.					
Homo sapiens	RefSeq	NM_021952.2	ILMN_17338	ELAVL4	NM_021952.2	NM_021952.2		1996	21361338	NM_021952.2	ELAVL4	NP_068771.1	ILMN_2065254	0005270142	S	1160	CCTCTGGCAGCTCTTTGGCCCCTTTGGAGCAGTGAACAACGTAAAGGTGA	1	+	50439230-50439279	1p33a	Homo sapiens ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) (ELAVL4), mRNA.		Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 10348344] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1655278] [evidence TAS]; Interacting selectively with the 3' untranslated region of an mRNA molecule [goid 3730] [pmid 10848602] [evidence TAS]	HUD; PNEM	HUD; PNEM
Homo sapiens	RefSeq	NM_052879.3	ILMN_2132	LARP4	NM_052879.3	NM_052879.3		113251	40353737	NM_052879.3	LARP4	NP_443111.3	ILMN_2347888	0003840360	A	6368	GTACATCCTTGTATTTGTATTTGTTTTCAACATCGCCAAGGTGCTATGGG	12	+	49159963-49160012	12q13.13a	Homo sapiens La ribonucleoprotein domain family, member 4 (LARP4), transcript variant 1, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC74631; DKFZp686E039; PP13296	MGC74631; DKFZp686E039; PP13296
Homo sapiens	RefSeq	NM_001001680.1	ILMN_165372	FLJ42102	XR_017872.1	XR_017872.1		399923	113422476	XR_017872.1	FLJ42102		ILMN_1789531	0004850474	S	1647	CATGCATGACTCAGCGCAAGGGTGCTGCTGTGGCAGAGGCATCTCTTTTG	11	-	70794905-70794954	11q13.4a	PREDICTED: Homo sapiens FLJ42102 protein (FLJ42102), misc RNA.					
Homo sapiens	RefSeq	XR_038758.1	ILMN_344408	LOC100131565	XR_038758.1	XR_038758.1		100131565	169173194	XR_038758.1	LOC100131565		ILMN_3286594	0002260706	M	445	GGCGCTGTTGTTAATGTTAGAGCTAATTGTGATAAGAGAGCAGTGTGGAC				8p22d	PREDICTED: Homo sapiens misc_RNA (LOC100131565), miscRNA.					
Homo sapiens	RefSeq	NR_002178.1	ILMN_14083	TTTY4C	NR_002177.1	NR_002177.1		474150	54312059	NR_002177.1	TTTY4C		ILMN_1689843	0006620088	S	1	GCCAGGTCTGCAGTTGGAGCCCATTGTGTGAGGCAGTCTGTGAAGGAAGT	Y	-	27245989-27246038	Yq11.23a	Homo sapiens testis-specific transcript, Y-linked 4C (non-protein coding) (TTTY4C), non-coding RNA.					
Homo sapiens	RefSeq	NM_001128635.1	ILMN_366289	RIMBP3B	NM_001128635.1	NM_001128635.1		440804	191252813	NM_001128635.1	RIMBP3B	NP_001122107.1	ILMN_3247152	0004150433	S	234	GGAGCGGGCAGGCTGGCGGGCGGAACGGCGGCGCTTCGCTGCCCGGGAGC	22	+	21738273-21738322	22q11.21f	Homo sapiens RIMS binding protein 3B (RIMBP3B), mRNA.					
Homo sapiens	RefSeq	XM_938248.1	ILMN_40778	LOC649182	XM_938248.1	XM_938248.1		649182	89061039	XM_938248.1	LOC649182	XP_943341.1	ILMN_1703724	0004200519	S	109	CAGGAACTGGTTGAGAACTGGAGGAACTTAAAATCTAGCATCGGGAAGAC					PREDICTED: Homo sapiens similar to heat shock protein 90Bf (LOC649182), mRNA.					
Homo sapiens	RefSeq	XM_290795.5	ILMN_138265	LOC645537	XM_290795.5	XM_290795.5		645537	89041331	XM_290795.5	LOC645537	XP_290795.5	ILMN_1793747	0003800156	S	79	CTGCGTCAGGCGCTGGAGAAGTTTGAGGACTCCAAGGAGGTAGCAGAAAC	17	+	27392100-27392149		PREDICTED: Homo sapiens similar to SH3-containing GRB2-like protein 1 (SH3 domain protein 2B) (Extra eleven-nineteen leukemia fusion gene) (EEN) (EEN fusion partner of MLL) (LOC645537), mRNA.					
Homo sapiens	RefSeq	NM_033044.2	ILMN_3751	MACF1	NM_033044.2	NM_033044.2		23499	33188442	NM_033044.2	MACF1	NP_149033.2	ILMN_1718884	0004610086	I	5417	GCTCAGAGAAAGCCCTGGCAGTGAACAAACTCCCTTCATGACTGCACCTG	1	+	39574813-39574862	1p34.3a-p34.2d	Homo sapiens microtubule-actin crosslinking factor 1 (MACF1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10559237] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10529403] [evidence NAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence NAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 10529403] [evidence NAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 10559237] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0465; FLJ45612; ACF7; ABP620; KIAA1251; OFC4; MACF; FLJ46776	KIAA0465; FLJ45612; ACF7; ABP620; KIAA1251; OFC4; MACF; FLJ46776
Homo sapiens	RefSeq	XM_498510.2	ILMN_44486	LOC440030	XM_498510.2	XM_498510.2		440030	89034586	XM_498510.2	LOC440030	XP_498510.2	ILMN_1664154	0004220491	S	972	GGTAACCACTGGCCCCTGTCTCCACCTCCACACCTAAGAAGCCCCAAATC					PREDICTED: Homo sapiens hypothetical LOC440030 (LOC440030), mRNA.					
Homo sapiens	Unigene	Hs.553290	ILMN_111320	HS.553290	Hs.553290		Hs.553290		58304153	CX787363			ILMN_1847029	0003800382	S	281	GCCAAGTGTGGTGGGATTGGCTGATGTCGGATGTGTGGTAGGATTGATTG	X	-	150101645-150101694		HESC3_84_D06.g1_A036 Human embryonic stem cells Homo sapiens cDNA clone IMAGE:7483454 5, mRNA sequence					
Homo sapiens	RefSeq	NM_003239.1	ILMN_13811	TGFB3	NM_003239.1	NM_003239.1		7043	4507464	NM_003239.1	TGFB3	NP_003230.1	ILMN_1687652	0001030008	S	2317	GTCTTCCCCCACTTCCCCTCCAAGACCCTGTGTTCATTTGGTGTTCCTGG	14	-	75494408-75494457	14q24.3b	Homo sapiens transforming growth factor, beta 3 (TGFB3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 3457014] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 3457014] [evidence EXP]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [pmid 14679171] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 3164476] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 11157754] [evidence IDA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 3164476] [evidence TAS]; The process by which the anatomical structures of the salivary gland are generated and organized. Morphogenesis pertains to the creation of form [goid 7435] [pmid 18080134] [evidence IEP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 7493022] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [pmid 17401695] [evidence IEP]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; The formation of bone involved in the continuous turnover of bone matrix and mineral [goid 43932] [pmid 17401695] [evidence IEP]	Interacting selectively with a type II transforming growth factor beta receptor [goid 5114] [pmid 18243111] [evidence IDA]; Interacting selectively with a type II transforming growth factor beta receptor [goid 5114] [pmid 11157754] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 18243111] [evidence IDA]; Interacting selectively with TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types [goid 50431] [pmid 18243111] [evidence IDA]	FLJ16571; ARVD; TGF-beta3	FLJ16571; ARVD; TGF-beta3
Homo sapiens	RefSeq	NM_002717.2	ILMN_24841	PPP2R2A	NM_002717.2	NM_002717.2		5520	32307111	NM_002717.2	PPP2R2A	NP_002708.1	ILMN_1788961	0003710594	S	2075	TACAGCTCATTCTTACTGTGGCTTGTAGCATTCCTCCTCTTCTGGCCTCC	8	+	26227974-26228023	8p21.2b	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha isoform (PPP2R2A), mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 1849734] [evidence IDA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1849734] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 1849734] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 1849734] [evidence TAS]	MGC52248; FLJ26613; PR55A; B55A; PR52A	MGC52248; FLJ26613; PR55A; B55A; PR52A
Homo sapiens	RefSeq	XR_038401.1	ILMN_341006	LOC100131970	XR_038401.1	XR_038401.1		100131970	169172761	XR_038401.1	LOC100131970		ILMN_3240490	0003420563	S	220	ACCTGGCCGGGGTGGGGAGGAGGTGCAGGGCATTGCCAGAGAGGGCCTGT	8	-	7067129-7067178	8p23.1f	PREDICTED: Homo sapiens misc_RNA (LOC100131970), miscRNA.					
Homo sapiens	RefSeq	NM_001001994.1	ILMN_550	GPM6B	NM_001001994.1	NM_001001994.1		2824	50263052	NM_001001994.1	GPM6B	NP_001001994.1	ILMN_1670308	0005340465	I	86	CAGAAGCCCGGTCAGCGCACGTGCCCGCGAGACCTGCAAACTTGTGCCAC	X	-	13956696-13956745	Xp22.2	Homo sapiens glycoprotein M6B (GPM6B), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8661015] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC17150; MGC54284; M6B	MGC54284; M6B; MGC17150
Homo sapiens	RefSeq	NM_022170.1	ILMN_38572	LOC653994	XM_944439.2	XM_944439.2		653994	113419131	XM_944439.2	LOC653994	XP_949532.1	ILMN_1729832	0004040048	I	413	TGGGTAGCTCTCGAGAATCTAGAGGTGGATGGGATTCCCGGGATGACTTC					PREDICTED: Homo sapiens similar to eukaryotic translation initiation factor 4H isoform 2, transcript variant 5 (LOC653994), mRNA.					EIF4H; KIAA0038; WSCR1; WBSCR1
Homo sapiens	RefSeq	XM_926626.1	ILMN_38590	LOC653254	XM_926626.1	XM_926626.1		653254	89038654	XM_926626.1	LOC653254	XP_931719.1	ILMN_1748251	0003780376	S	6515	ATATTTGATTCAATGGAATTTACCTAAAAAATAAAGACTAAAAATGTGAA	15	+	87546543-87546590:87550228-87550229		PREDICTED: Homo sapiens similar to abhydrolase domain containing 2 (LOC653254), mRNA.					
Homo sapiens	RefSeq	NM_014989.2	ILMN_12317	RIMS1	NM_014989.3	NM_014989.3		22999	115648037	NM_014989.3	RIMS1	NP_055804.2	ILMN_1700759	0006020347	S	5047	AATTGTTCCCACCGTCCTCACTGGTGGATCCCACACTCACTCCCCTCACC	6	+	72975113-72975162	6q13b	Homo sapiens regulating synaptic membrane exocytosis 1 (RIMS1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISS]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [pmid 11438518] [evidence NAS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 11438518] [evidence IDA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 11438518] [evidence NAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [pmid 11438518] [evidence TAS]; The release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell, requiring the presence of calcium ions [goid 17156] [pmid 11438518] [evidence TAS]; A process of exocytosis in which soluble proteins and other substances are initially stored in secretory vesicles for later release. It is found mainly in cells that are specialized for secreting products such as hormones, neurotransmitters, or digestive enzymes rapidly on demand [goid 45055] [pmid 11438518] [evidence NAS]; The regulated release of a substance by a cell, a group of cells, or a tissue [goid 46903] [pmid 11438518] [evidence NAS]; A process that modulates long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48169] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11438518] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11438518] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CORD7; RIM; MGC176677; MGC167823; RIM1; RAB3IP2; KIAA0340	CORD7; RAB3IP2; KIAA0340; RIM; RIM1
Homo sapiens	RefSeq	NM_145314.1	ILMN_17295	UCMA	NM_145314.1	NM_145314.1		221044	21687122	NM_145314.1	UCMA	NP_660357.2	ILMN_1773497	0006450072	S	588	TCTCAGCTTGGGGTCTGCAGTGGCCAGCAGCTCTTGAAAAGACGCATGCC	10	-	13303961-13304010	10p13d	Homo sapiens upper zone of growth plate and cartilage matrix associated (UCMA), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]				
Homo sapiens	RefSeq	NM_144650.1	ILMN_5010	ADHFE1	NM_144650.2	NM_144650.2		137872	133922589	NM_144650.2	ADHFE1	NP_653251.2	ILMN_1702858	0002760121	S	1651	CCAGGCTCGACTTCAGGGGTCAGTGTTCCTGTCCCAAACCCCACACAGAA	8	+	67380800-67380849	8q13.1b	Homo sapiens alcohol dehydrogenase, iron containing, 1 (ADHFE1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	The directed movement of molecular hydrogen (H2) into, out of, within or between cells [goid 15993] [pmid 16435184] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (S)-3-hydroxybutanoate + 2-oxoglutarate = acetoacetate + (R)-2-hydroxyglutarate [goid 47988] [pmid 16435184] [evidence IDA]	HOT; FLJ32430; ADH8; MGC48605; HMFT2263	FLJ32430; HOT; ADH8; MGC48605; HMFT2263
Homo sapiens	Unigene	Hs.449276	ILMN_93590	HS.449276	Hs.449276		Hs.449276		47009756	BX437333			ILMN_1878885	0007200379	S	84	CTCCTGGGAACAGGGTCCATGGATGCTGATGTTACCCAGACCCCAAGGAA	7	+	142043986-142044035		BX437333 Homo sapiens THYMUS Homo sapiens cDNA clone CS0CAP006YG22 5-PRIME, mRNA sequence					
Homo sapiens	RefSeq	XM_943505.1	ILMN_139121	KIF27	XM_943505.1	XM_943505.1		55582	89030402	XM_943505.1	KIF27	XP_948598.1	ILMN_1743870	0006550746	I	2720	AGCAAAGTCTCAGGATACAAAATCAGTTGAACATCTCCATAAATCTGGCC				9q21.32c	PREDICTED: Homo sapiens kinesin family member 27, transcript variant 4 (KIF27), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	XM_941673.1	ILMN_166839	LOC644021	XM_001128559.1	XM_001128559.1		644021	113421501	XM_001128559.1	LOC644021	XP_001128559.1	ILMN_1798853	0001940528	S	344	CTGAGCAGCACAATCAGGAATACAGCCAAGGGAAACACAGCTTCACAATG	10	-	48600438-48600487	10q11.22c	PREDICTED: Homo sapiens similar to cathepsin L-like protein (LOC644021), mRNA.					
Homo sapiens	RefSeq	NM_001004758.1	ILMN_169195	OR51S1	NM_001004758.1	NM_001004758.1		119692	52317153	NM_001004758.1	OR51S1	NP_001004758.1	ILMN_1726969	0006580390	S	724	TGGAAGGCTGGTCAAACCTGTGCTGCCCACCTCTCTGCAGTGCTCCTCTT	11	-	4869665-4869714	11p15.4c	Homo sapiens olfactory receptor, family 51, subfamily S, member 1 (OR51S1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]	OR11-24	OR11-24
Homo sapiens	RefSeq	NM_018981.1	ILMN_19735	DNAJC10	NM_018981.1	NM_018981.1		54431	24308126	NM_018981.1	DNAJC10	NP_061854.1	ILMN_1656486	0000990528	S	3478	CACAGCCGAGAAACAGTGCAGCAGTATATGTGCACACAGTAAGTACACAA	2	+	183350785-183350834	2q32.1a	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 10 (DNAJC10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	DKFZp434J1813; JPDI; ERdj5; MGC104194	DKFZp434J1813; JPDI; ERdj5; MGC104194
Homo sapiens	RefSeq	NM_018981.1	ILMN_19735	DNAJC10	NM_018981.1	NM_018981.1		54431	24308126	NM_018981.1	DNAJC10	NP_061854.1	ILMN_2151541	0004250452	S	3908	CTGTAGTTATTCCAGTTACTAGTTTACTGTCAGAGGGCTGCCTTTTTCAG	2	+	183351215-183351264	2q32.1a	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 10 (DNAJC10), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	DKFZp434J1813; JPDI; ERdj5; MGC104194	DKFZp434J1813; JPDI; ERdj5; MGC104194
Homo sapiens	Unigene	Hs.582255	ILMN_134436	HS.582255	Hs.582255		Hs.582255		83133004	DB304625			ILMN_1856810	0000110114	S	77	TGCAAACATACTACATAGAGCTCCTGTGTGACCTTCACCCAATTTCCCCC	5	-	94648665-94648714		DB304625 BRAWH3 Homo sapiens cDNA clone BRAWH3004440 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020894.1	ILMN_958	KIAA1530	NM_020894.1	NM_020894.1		57654	55741662	NM_020894.1	KIAA1530	NP_065945.1	ILMN_1810225	0005910026	I	4406	CCATTGACCTGTTTAACCTTATGCCAGTGCCACAGTGCCTTGATCAGTGC	4	+	1371578-1371627	4p16.3c	Homo sapiens KIAA1530 (KIAA1530), mRNA.				MGC117169	MGC117169
Homo sapiens	RefSeq	NM_017670.1	ILMN_12271	OTUB1	NM_017670.1	NM_017670.1		55611	8923113	NM_017670.1	OTUB1	NP_060140.1	ILMN_1723871	0004780707	S	1469	GAGGGCAGCCTTCAAACGTGTGGGGTCTACAGTCCTCAGGTCTAGGCAGG	11	+	63522203-63522252	11q13.1a	Homo sapiens OTU domain, ubiquitin aldehyde binding 1 (OTUB1), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	OTU1; FLJ20113; OTB1; FLJ40710	OTU1; FLJ20113; FLJ40710; OTB1
Homo sapiens	RefSeq	XM_943439.1	ILMN_164154	LOC729373	XM_001130083.1	XM_001130083.1		729373	113420816	XM_001130083.1	LOC729373	XP_001130083.1	ILMN_1742679	0007330386	S	69	TTGCCTGCAAATCCGAGTTGTGTCCCACCAACGCGCTGGGACCGGTCTGT	9	-	85726305-85726354	9q21.32c	PREDICTED: Homo sapiens hypothetical protein LOC729373 (LOC729373), mRNA.					
Homo sapiens	RefSeq	XM_001716088.1	ILMN_342730	LOC730474	XM_001716088.1	XM_001716088.1		730474	169167858	XM_001716088.1	LOC730474	XP_001716140.1	ILMN_3301572	0003420048	M	38	ACCTGAAATATCTCCATAAGGAGCTGTGGGCAGACCAAGACTCTGGATCC					PREDICTED: Homo sapiens hypothetical LOC730474 (LOC730474), partial mRNA.					
Homo sapiens	RefSeq	XM_926094.1	ILMN_31274	LOC652438	XM_941881.2	XM_941881.2		652438	113422842	XM_941881.2	LOC652438	XP_946974.2	ILMN_1677837	0007160470	S	812	GCCAGGCTGAGGAGCTGCAGAAGCAATACAAGGTGAAATTGGATCTCTGG					PREDICTED: Homo sapiens similar to Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) (LOC652438), mRNA.					
Homo sapiens	RefSeq	XM_941881.1	ILMN_31274	LOC652438	XM_941881.2	XM_941881.2		652438	113422842	XM_941881.2	LOC652438	XP_946974.2	ILMN_1671890	0006620451	S	119	ACATGGACTGGGGAAAAGTAGCTTTTAAAAACTTTTCTGGTGAAATGTAC					PREDICTED: Homo sapiens similar to Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) (LOC652438), mRNA.					
Homo sapiens	RefSeq	NM_144684.1	ILMN_10153	ZNF480	NM_144684.1	NM_144684.1		147657	21389584	NM_144684.1	ZNF480	NP_653285.1	ILMN_2126423	0003520537	S	4532	GGGAACAGTAGACACGGGCTTATGGGTGGAGGTTGGGAAGAGGATGAAGA	19	+	57520802-57520851	19q13.33e	Homo sapiens zinc finger protein 480 (ZNF480), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC32104	MGC32104
Homo sapiens	RefSeq	NM_012392.1	ILMN_11072	PEF1	NM_012392.2	NM_012392.2		553115	142385278	NM_012392.2	PEF1	NP_036524.1	ILMN_1729748	0006180670	S	1347	GCCACACCCATAAATCCTTGTGTGTTAACTTCTAGCTGCCTGGGGCTGGC	1	-	32095684-32095733	1p35.2a	Homo sapiens penta-EF-hand domain containing 1 (PEF1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11278427] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus [goid 51592] [pmid 11278427] [evidence IPI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10486255] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11278427] [evidence IPI]	PEF1A; PEFLIN	PEF1A; PEFLIN
Homo sapiens	RefSeq	NM_004833.1	ILMN_10231	AIM2	NM_004833.1	NM_004833.1		9447	4757733	NM_004833.1	AIM2	NP_004824.1	ILMN_2214232	0000130753	S	1094	CCTAAGTGACAACACTGGGAAAATGGAAGTACTGGGGGTTAGAAACGAGG	1	-	159033382-159033431	1q23.1g-q23.2a	Homo sapiens absent in melanoma 2 (AIM2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9242382] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PYHIN4	PYHIN4
Homo sapiens	RefSeq	NM_004833.1	ILMN_10231	AIM2	NM_004833.1	NM_004833.1		9447	4757733	NM_004833.1	AIM2	NP_004824.1	ILMN_1681301	0001260270	S	981	GCTGGTGAAACCCCGAAGATCAACACGCTTCAAACTCAGCCCCTTGGAAC	1	-	159035730-159035779	1q23.1g-q23.2a	Homo sapiens absent in melanoma 2 (AIM2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9242382] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PYHIN4	PYHIN4
Homo sapiens	RefSeq	NM_021140.1	ILMN_13785	UTX	NM_021140.1	NM_021140.1		7403	10863942	NM_021140.1	UTX	NP_066963.1	ILMN_1654488	0002710731	S	4384	GGGAGAGAGTACTGCTCCTACTCCAGGACTCTCACAAAGCTGATGAGCTG	X	+	44855761-44855810	Xp11.3b	Homo sapiens ubiquitously transcribed tetratricopeptide repeat, X chromosome (UTX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC141941; DKFZp686A03225; bA386N14.2	MGC141941; DKFZp686A03225; bA386N14.2
Homo sapiens	RefSeq	NM_177989.1	ILMN_3186	ACTL6A	NM_177989.2	NM_177989.2		86	98985780	NM_177989.2	ACTL6A	NP_817126.1	ILMN_1749297	0005080603	A	1195	GGAGGTTTAGCTCATGGATTGGCGGCTCCATTCTAGCCTCTTTGGGTACC	3	+	179304377-179304420:179305718-179305723	3q26.33a	Homo sapiens actin-like 6A (ACTL6A), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11256614] [evidence IDA]; Any complex that mediates dynamic changes in eukaryotic chromatin [goid 16585] [evidence IEA]; A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60) [goid 35267] [pmid 10966108] [evidence IDA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [evidence IEA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 9845365] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9845365] [evidence TAS]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 9845365] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC5382; BAF53A; ACTL6	MGC5382; BAF53A; ACTL6
Homo sapiens	Unigene	Hs.536125	ILMN_103041	HS.536125	Hs.536125		Hs.536125		51652061	CR744726			ILMN_1821199	0006580706	S	38	CAGATTGAGGGGAAGGGGAAGAGGAAGAAAGAAGCAGCTTGGTTTTTCTC	1	-	179198221-179198270		CR744726 Homo sapiens library (Ebert L) Homo sapiens cDNA clone IMAGp971O08109 ; IMAGE:37816 3, mRNA sequence					
Homo sapiens	RefSeq	XM_930165.1	ILMN_137943	LOC647147	XM_930165.1	XM_930165.1		647147	88953237	XM_930165.1	LOC647147	XP_935258.1	ILMN_1724925	0001980086	S	1444	CATAACTGCGAGGAGCCGCAGTCGTACTGGCTGTGCAGGAGACCACCCAC	2	-	64969489-64969538		PREDICTED: Homo sapiens hypothetical protein LOC647147 (LOC647147), mRNA.					
Homo sapiens	RefSeq	XM_926429.1	ILMN_38209	LOC653189	XM_926429.1	XM_926429.1		653189	88953766	XM_926429.1	LOC653189	XP_931522.1	ILMN_1729908	0002320112	S	121	CCTGGAATATTAAGTCAGCTTGGTGCTGACAGTTTAACAAGCCTTAGGAA	2	+	159568898-159568947	2q24.1e	PREDICTED: Homo sapiens similar to basic transcription factor 3-like 4 (LOC653189), mRNA.					
Homo sapiens	RefSeq	XM_001724842.1	ILMN_339718	LOC100134549	XM_001724842.1	XM_001724842.1		100134549	169170555	XM_001724842.1	LOC100134549	XP_001724894.1	ILMN_3239406	0004890632	S	61	GACAATGGAGAAGCCTCCGTAGAGCGCGTGGTGAAGGCATGGAGGCCCCC	7	+	99530767-99530804:99530805-99530816		PREDICTED: Homo sapiens hypothetical protein LOC100134549 (LOC100134549), mRNA.					
Homo sapiens	RefSeq	NM_145117.3	ILMN_8536	NAV2	NM_145117.3	NM_145117.3		89797	58651739	NM_145117.3	NAV2	NP_660093.2	ILMN_2399304	0000290239	A	8937	TCTGGACGAGCCTTGCCTGACCTCTTCGGTGCTGACCTTCCCAAAGTGAT	11	+	20097697-20097746	11p15.1b	Homo sapiens neuron navigator 2 (NAV2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	STEERIN2; HELAD1; RAINB1; FLJ10633; FLJ23707; FLJ11030; POMFIL2; KIAA1419	STEERIN2; HELAD1; RAINB1; FLJ10633; FLJ23707; FLJ11030; POMFIL2; KIAA1419
Homo sapiens	RefSeq	NM_145117.3	ILMN_8536	NAV2	NM_145117.3	NM_145117.3		89797	58651739	NM_145117.3	NAV2	NP_660093.2	ILMN_2399300	0004230195	A	10833	TTGTCATGAGGTTTTTGGATTTGCCAATGATCTGCTGGACATCATGCCCC	11	+	20099593-20099642	11p15.1b	Homo sapiens neuron navigator 2 (NAV2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	STEERIN2; HELAD1; RAINB1; FLJ10633; FLJ23707; FLJ11030; POMFIL2; KIAA1419	STEERIN2; HELAD1; RAINB1; FLJ10633; FLJ23707; FLJ11030; POMFIL2; KIAA1419
Homo sapiens	RefSeq	XM_001722701.1	ILMN_337074	LOC100132781	XM_001722701.1	XM_001722701.1		100132781	169177620	XM_001722701.1	LOC100132781	XP_001722753.1	ILMN_3201609	0005690008	A	250	TGCTACTTTGACCTTTGCGCCTTGGCACACGACAGTAGCCTATATTTGCC				9q22.33a	PREDICTED: Homo sapiens similar to hCG1647409 (LOC100132781), mRNA.					
Homo sapiens	RefSeq	NM_001490.3	ILMN_306727	GCNT1	NM_001097635.1	NM_001097635.1		2650	148277032	NM_001097635.1	GCNT1	NP_001091104.1	ILMN_1666545	0000870600	S	4921	GGGTAGGAAGAGGCCATGTTTCAGTTCGTTTTCTCTGTAGGGTCGATTGA	9	+	78311559-78311608	9q21.13c	Homo sapiens glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (GCNT1), transcript variant 4, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1329093] [evidence TAS]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 1329093] [evidence TAS]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R [goid 3829] [pmid 1329093] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	NACGT2; C2GNT; C2GNT1; MGC126335; G6NT; C2GNT-L; MGC126336; NAGCT2	NACGT2; C2GNT; MGC126335; C2GNT-L; G6NT; MGC126336; NAGCT2
Homo sapiens	RefSeq	NM_006446.2	ILMN_162063	SLCO1B1	NM_006446.2	NM_006446.2		10599	19923779	NM_006446.2	SLCO1B1	NP_006437.2	ILMN_2084745	0006550072	S	2543	ACAGGTAGAGGTTAAAAAGGAGGAGCTAGATTCATATCCTAAGTAAAGAG	12	+	21283761-21283810	12p12.2a-p12.1e	Homo sapiens solute carrier organic anion transporter family, member 1B1 (SLCO1B1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10358072] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10358072] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [pmid 10358072] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of organic anions from one side of a membrane to the other, in a sodium independent manner [goid 15347] [pmid 10358072] [evidence TAS]	LST-1; OATP2; OATP1B1; SLC21A6; MGC133282; OATP-C	LST-1; OATP2; OATP1B1; SLC21A6; MGC133282; OATP-C
Homo sapiens	RefSeq	NM_002419.3	ILMN_23190	MAP3K11	NM_002419.3	NM_002419.3		4296	56237030	NM_002419.3	MAP3K11	NP_002410.1	ILMN_1651788	0004890068	S	3376	CTGTCACCAGCACTTTTGACCAAGTCCTGCTACTGCGGCCCCTGCCCTAG	11	-	65365373-65365422	11q13.1d	Homo sapiens mitogen-activated protein kinase kinase kinase 11 (MAP3K11), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 12529434] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [pmid 12529434] [evidence IDA]	Progression through G1 phase, one of two 'gap' phases in the mitotic cell cycle; G1 is the interval between the completion of mitosis and the beginning of DNA synthesis [goid 80] [pmid 15258589] [evidence IMP]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [pmid 12529434] [evidence IMP]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 15258589] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 15258589] [evidence IMP]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46328] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 8195146] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [pmid 9829970] [evidence IPI]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8195146] [evidence IDA]; Catalysis of the phosphorylation and activation of JUN kinase kinases (JNKKs) [goid 4706] [evidence ISS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11784851] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9829970] [evidence IPI]	SPRK; MLK-3; MGC17114; MLK3; PTK1	SPRK; MLK-3; MGC17114; MLK3; PTK1
Homo sapiens	RefSeq	XR_037541.1	ILMN_342459	LOC100130904	XR_037541.1	XR_037541.1		100130904	169214367	XR_037541.1	LOC100130904		ILMN_3185147	0003460048	A	430	GTTCTGACCTGTCATCGGGGGACCACCTTGAAGAAGCAGGAAAACTTGAG					PREDICTED: Homo sapiens misc_RNA (LOC100130904), miscRNA.					
Homo sapiens	RefSeq	XR_037541.1	ILMN_342459	LOC100130904	XR_037541.1	XR_037541.1		100130904	169214367	XR_037541.1	LOC100130904		ILMN_3261611	0001090458	M	967	ATTGGGATCTTCTCTGTGTGTGAGAAGGGTGATGAGCCGCCTCCTGCCTC					PREDICTED: Homo sapiens misc_RNA (LOC100130904), miscRNA.					
Homo sapiens	RefSeq	NM_017435.2	ILMN_22034	SLCO1C1	NM_017435.2	NM_017435.2		53919	21361594	NM_017435.2	SLCO1C1	NP_059131.1	ILMN_2144297	0000460474	S	2981	CTTAGGATGGAGCAGAACATGGAGAGGAAGATTTCATTTTAAGCTCCTCC	12	+	20797203-20797252	12p12.2a	Homo sapiens solute carrier organic anion transporter family, member 1C1 (SLCO1C1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	SLC21A14; OATP1; OATP1C1; OATP-F	SLC21A14; OATP1; OATP1C1; OATP-F
Homo sapiens	RefSeq	XM_928595.1	ILMN_45011	LOC653353	XM_928595.1	XM_928595.1		653353	89029300	XM_928595.1	LOC653353	XP_933688.1	ILMN_1791585	0007560193	I	120	GGGCCACTTTGTAAGAACAGGATTTTTCAAACTGGGCCCATACTGGTACG	9	+	42706969-42707018		PREDICTED: Homo sapiens similar to forkhead box D4-like 4, transcript variant 1 (LOC653353), mRNA.					
Homo sapiens	RefSeq	NM_014595.1	ILMN_4728	NT5C	NM_014595.1	NM_014595.1		30833	7657032	NM_014595.1	NT5C	NP_055410.1	ILMN_1806432	0006220070	S	853	TCCCGAGAGGCTGTCCCTGGACCCTGGCTGGCATGGAAATACAGTGGGAA	17	-	73126361-73126410	17q25.1c	Homo sapiens 5', 3'-nucleotidase, cytosolic (NT5C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10681516] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10681516] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2157703] [evidence EXP]	The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a pyrimidine deoxyribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9223] [pmid 10681516] [evidence IDA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [pmid 10681516] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [pmid 2157703] [evidence EXP]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with pyrimidine nucleotide, any compound consisting of a pyrimidine nucleoside esterified with (ortho)phosphate [goid 19103] [pmid 10681516] [evidence IDA]	PN-II; DNT; PN-I; cdN; DNT1; UMPH2; P5N2; dNT-1	PN-II; DNT; PN-I; cdN; DNT1; UMPH2; P5N2; dNT-1
Homo sapiens	Unigene	Hs.554203	ILMN_111840	HS.554203	Hs.554203		Hs.554203		37547462	AY129027			ILMN_1838767	0005130706	S	3317	GGCGTACACATCACAACTTTAAACCCCGTCCGTACTGAAGCCTGCGTCCG	9	-	138626235-138626284		Homo sapiens clone FP7915 unknown mRNA					
Homo sapiens	RefSeq	NM_004938.1	ILMN_33886	DAPK1	NM_004938.2	NM_004938.2		1612	89363046	NM_004938.2	DAPK1	NP_004929.2	ILMN_1708340	0005700220	S	5206	GCAGAAGAGGGTGTGTTTGAAATCATCGGAGTCAGCCAGGAGCTGTCACC	9	+	89512637-89512686	9q21.33c	Homo sapiens death-associated protein kinase 1 (DAPK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10629061] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10629061] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10629061] [evidence IDA]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 7828849] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 10629061] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10629061] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DAPK; DKFZp781I035	DAPK; DKFZp781I035
Homo sapiens	RefSeq	NM_032560.3	ILMN_169294	SMEK1	NM_032560.4	NM_032560.4		55671	95113667	NM_032560.4	SMEK1	NP_115949.3	ILMN_1654998	0000940154	I	26	GTTTTGGCTGTGTGAGGAAGACGGAAGAGACGGCGGCGGAGGGAAACCGA	14	-	91976569-91976618	14q32.12a	Homo sapiens SMEK homolog 1, suppressor of mek1 (Dictyostelium) (SMEK1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	smk-1; MSTP033; KIAA2010; smk1; FLFL1	MSTP033; SMEK1
Homo sapiens	RefSeq	XR_015181.2	ILMN_167108	LOC727833	XR_015181.2	XR_015181.2		727833	169209792	XR_015181.2	LOC727833		ILMN_3290155	0005820112	M	1513	CTGTACTGAGGATAGCAGTGGAGGATGAGGTGGTGGAGGGAGCATACCCC	16	+	10114233-10114282	16p13.2a	PREDICTED: Homo sapiens misc_RNA (LOC727833), miscRNA.					
Homo sapiens	RefSeq	XR_001007.1	ILMN_169178	MGC4294	XR_017834.1	XR_017834.1		79160	113429048	XR_017834.1	MGC4294		ILMN_1749414	0003890458	A	145	TCGAGTGGGCAAACGGCTTACTCAAAGGCCAGGAGCAGCTACCCGATGAC				20q13.32a	PREDICTED: Homo sapiens hypothetical protein MGC4294 (MGC4294), misc RNA.					
Homo sapiens	RefSeq	XR_015556.1	ILMN_165712	LOC729298	XR_015556.1	XR_015556.1		729298	113423806	XR_015556.1	LOC729298		ILMN_3306725	0004590091	M	9	CGAGAAGAGGGGAGAGAAGCAGCCTGAAAAGTCGCAGCGAGCTGGAGCTA				12q14.3b	PREDICTED: Homo sapiens misc_RNA (LOC729298), miscRNA.					
Homo sapiens	RefSeq	XM_498571.2	ILMN_33035	LOC440160	XM_498571.2	XM_498571.2		440160	88957838	XM_498571.2	LOC440160	XP_498571.2	ILMN_1715693	0003850367	S	115	TCCTGCAGCTGTGTTTGAACAGGTCATTTACCATGCGGTCCTCCAGGTTC					PREDICTED: Homo sapiens hypothetical LOC440160 (LOC440160), mRNA.					
Homo sapiens	RefSeq	NM_001955.2	ILMN_28724	EDN1	NM_001955.2	NM_001955.2		1906	21359861	NM_001955.2	EDN1	NP_001946.2	ILMN_1682775	0007040386	S	1158	CCACACAGGGGTGGAGTTTCTGACGAAGGTCCTAAGGGAGTGTTTGTGTC	6	+	12404601-12404650	6p24.1b	Homo sapiens endothelin 1 (EDN1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12379507] [evidence IDA]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The process by which endothelin modulates the force with which blood passes through the circulatory system. Endothelin is a hormone that is released by the endothelium, and it is a vasoconstrictor [goid 3100] [pmid 2649896] [evidence IDA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 12379507] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; Any process that activates or increases the frequency or rate of heart contraction [goid 10460] [pmid 2649896] [evidence IDA]; Any process that increases the rate, frequency, or extent of the orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 10595] [pmid 8999856] [evidence TAS]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IEA]; A series of reactions, mediated by the intracellular phosphoinositide 3-kinase (PI3K). PI3K cascades lie downstream of many cell surface receptor linked signaling pathways and regulate numerous cellular functions [goid 14065] [pmid 17078114] [evidence IDA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the artery. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The artery is a vessel carrying blood away from the heart [goid 14824] [pmid 1725334] [evidence TAS]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IEA]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [evidence IEA]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 1917960] [evidence IDA]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 10770212] [evidence IDA]; The regulated release of a peptide hormone from secretory granules [goid 30072] [pmid 10770212] [evidence IDA]; The process of renal water excretion [goid 30146] [evidence IEA]; The process of renal sodium excretion [goid 30147] [evidence IEA]; The directed movement of nitric oxide, nitrogen monoxide, into, out of, within or between cells [goid 30185] [pmid 16820593] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of blood coagulation [goid 30195] [pmid 16820593] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30818] [evidence IEA]; A G-protein coupled signaling pathway that results in the activation of phospholipase D, causing an increase in cellular levels of phosphatidic acid [goid 31583] [evidence IEA]; Any process resulting in the inhibition or termination of the activity of protein kinase C [goid 42313] [pmid 16820593] [evidence IDA]; The process by which the anatomical structures of middle ear are generated and organized. Morphogenesis pertains to the creation of form. The middle ear is the air-filled cavity within the skull of vertebrates that lies between the outer ear and the inner ear. It is linked to the pharynx (and therefore to outside air) via the Eustachian tube and in mammals contains the three ear ossicles, which transmit auditory vibrations from the outer ear (via the tympanum) to the inner ear (via the oval window) [goid 42474] [evidence IEA]; Any process involved in the generation of rhythmic, synchronous excitatory synaptic inputs in a neural circuit [goid 43179] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of JUN kinase activity [goid 43507] [pmid 12847114] [evidence IDA]; A change in morphology and behavior of a leukocyte resulting from exposure to a specific antigen, mitogen, cytokine, cellular ligand, or soluble factor [goid 45321] [pmid 16820593] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [pmid 8999856] [evidence TAS]; Any process that increases cell size [goid 45793] [pmid 12847114] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [pmid 10770212] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of smooth muscle contraction [goid 45987] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the regulated release of a hormone from a cell or group of cells [goid 46887] [pmid 10770212] [evidence IDA]; A series of molecular signals in which a cell uses a water-soluble inositol phosphate to convert an extracellular signal into a response [goid 48016] [pmid 1917960] [evidence IDA]; The process by which the anatomical structures of blood vessels are generated and organized. Morphogenesis pertains to the creation of form. The blood vessel is the vasculature carrying blood [goid 48514] [evidence IEA]; Any process that activates or increases the rate or extent of smooth muscle cell proliferation [goid 48661] [pmid 10393673] [evidence IDA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the enzyme nitric-oxide synthase [goid 51771] [pmid 16820593] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 2649896] [evidence IDA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 10770212] [evidence IDA]; Interacting selectively with an endothelin A receptor [goid 31707] [evidence IEA]; Interacting selectively with an endothelin B receptor [goid 31708] [pmid 10770212] [evidence IDA]; Interacting selectively with an endothelin B receptor [goid 31708] [pmid 1713452] [evidence IPI]	ET1	ET1
Homo sapiens	RefSeq	NM_017577.2	ILMN_16454	GRAMD1C	NM_017577.2	NM_017577.2		54762	63055050	NM_017577.2	GRAMD1C	NP_060047.2	ILMN_2052717	0006860246	S	3339	CCAGAGTCCCCAAAGCCACATGGCATTATTATAGTCATTTTTGAGATGCC	3	+	115148285-115148334	3q13.31a	Homo sapiens GRAM domain containing 1C (GRAMD1C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ35862; DKFZp686K06117; FLJ40464; DKFZp434C0328	FLJ35862; DKFZp686K06117; FLJ40464; DKFZp434C0328
Homo sapiens	RefSeq	XM_942469.1	ILMN_35170	LOC650546	XM_942469.1	XM_942469.1		650546	89042911	XM_942469.1	LOC650546	XP_947562.1	ILMN_1814812	0006400414	I	1791	AGCCTTGCATGTGCAGAAAGTAAAAGCCAGGGTAGGCTTGTAACCTGCCC					PREDICTED: Homo sapiens similar to ubiquitin specific protease 32, transcript variant 1 (LOC650546), mRNA.					
Homo sapiens	RefSeq	XM_942469.1	ILMN_35170	LOC650546	XM_942469.1	XM_942469.1		650546	89042911	XM_942469.1	LOC650546	XP_947562.1	ILMN_1803479	0004180148	A	272	TGAAGGATGCTTTCAAGAGGACCTGTGGACTCTCATATTACATGGGCCAG					PREDICTED: Homo sapiens similar to ubiquitin specific protease 32, transcript variant 1 (LOC650546), mRNA.					
Homo sapiens	Unigene	Hs.543175	ILMN_106823	HS.543175	Hs.543175		Hs.543175		21251544	BQ448432			ILMN_1883153	0006650709	S	154	GGCAGGAAGCTGTTAGGTGGCAATGTCCTCTATTGTGCAGGAAGTGAGAC	3	-	42942936-42942985		UI-H-EU1-bag-d-07-0-UI.s1 NCI_CGAP_Ct1 Homo sapiens cDNA clone UI-H-EU1-bag-d-07-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_025015.2	ILMN_173169	HSPA12A	NM_025015.2	NM_025015.2		259217	119874212	NM_025015.2	HSPA12A	NP_079291.2	ILMN_2081087	0001400044	S	5648	CACCACCAGACGGGACTGTGTCTGCAAACTCTCTTGTCTTCACAGACGCC	10	-	118431754-118431803	10q25.3b	Homo sapiens heat shock 70kDa protein 12A (HSPA12A), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	KIAA0417; FLJ13874	KIAA0417; FLJ13874
Homo sapiens	RefSeq	NM_006118.3	ILMN_27167	HAX1	NM_006118.3	NM_006118.3		10456	66363692	NM_006118.3	HAX1	NP_006109.2	ILMN_2398903	0006770494	A	589	GGGTCTTGGAGAGTGATGCAAGAAGTGAATCCCCCCAACCAGCACCAGAC	1	+	152512985-152513034	1q21.3d	Homo sapiens HCLS1 associated protein X-1 (HAX1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9058808] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9058808] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9058808] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10760273] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]		Interacting selectively with interleukin-1 [goid 19966] [pmid 11554782] [evidence IDA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11554782] [evidence IDA]	HCLSBP1; SCN3; HS1BP1	HCLSBP1; SCN3; HS1BP1
Homo sapiens	RefSeq	NM_006118.3	ILMN_27167	HAX1	NM_006118.3	NM_006118.3		10456	66363692	NM_006118.3	HAX1	NP_006109.2	ILMN_2289775	0005310110	I	296	CCGTGGGAACCCAAGGTTCCATAGTCCTCAGCACCCCCCTGAGGAATTTG	1	+	152512517-152512566	1q21.3d	Homo sapiens HCLS1 associated protein X-1 (HAX1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9058808] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9058808] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9058808] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10760273] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]		Interacting selectively with interleukin-1 [goid 19966] [pmid 11554782] [evidence IDA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11554782] [evidence IDA]	HCLSBP1; SCN3; HS1BP1	HCLSBP1; SCN3; HS1BP1
Homo sapiens	RefSeq	NM_001018837.1	ILMN_27167	HAX1	NM_006118.3	NM_006118.3		10456	66363692	NM_006118.3	HAX1	NP_006109.2	ILMN_1750658	0004260377	A	847	TGGTGGACAGTGAGGGCCGGACAGAGACTACAGTAACCCGACACGAAGCA	1	+	152514515-152514564	1q21.3d	Homo sapiens HCLS1 associated protein X-1 (HAX1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9058808] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9058808] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9058808] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10760273] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]		Interacting selectively with interleukin-1 [goid 19966] [pmid 11554782] [evidence IDA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11554782] [evidence IDA]	HCLSBP1; SCN3; HS1BP1	HCLSBP1; SCN3; HS1BP1
Homo sapiens	RefSeq	NM_006762.1	ILMN_5657	LAPTM5	NM_006762.1	NM_006762.1		7805	5803055	NM_006762.1	LAPTM5	NP_006753.1	ILMN_1772359	0005360376	S	1922	CCACAGGTTAGTTCAGTCAAAGCAGGCAACCCCCTTGTGGGCACTGACCC	1	-	30978154-30978203	1p35.2b	Homo sapiens lysosomal multispanning membrane protein 5 (LAPTM5), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8661146] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC125860; MGC125861	MGC125860; MGC125861
Homo sapiens	RefSeq	XM_496804.2	ILMN_37406	HCG22	XM_496804.2	XM_496804.2		285834	88998764	XM_496804.2	HCG22	XP_496804.2	ILMN_1667229	0000840398	S	309	CTTTGTCACTGCAGACCCAGGGACCACCAAGGACTCCATCACTGCAGACC				6p21.33a	PREDICTED: Homo sapiens HLA complex group 22 (HCG22), mRNA.					
Homo sapiens	RefSeq	NM_022044.2	ILMN_29496	SDF2L1	NM_022044.2	NM_022044.2		23753	56243532	NM_022044.2	SDF2L1	NP_071327.2	ILMN_1749213	0003120079	S	796	GCAGGGCCACTCTTGGCAGAGACTTTGGGTTTGTAGGGGTCCTCAAGTGC	22	+	20328510-20328559	22q11.21f	Homo sapiens stromal cell-derived factor 2-like 1 (SDF2L1), mRNA.					
Homo sapiens	RefSeq	NR_002437.1	ILMN_20234	SNORD54	NR_002437.1	NR_002437.1		26795	71533177	NR_002437.1	SNORD54		ILMN_1663681	0006960110	S	3	GCGATGAGGAGGTACCTATTGTGTTGAGTAACGGTGATAATTTTATACGC	8	-	57148962-57149011	8q12.1b	Homo sapiens small nucleolar RNA, C/D box 54 (SNORD54), small nuclear RNA.				U54; RNU54	U54; RNU54
Homo sapiens	RefSeq	NM_000807.1	ILMN_2368	GABRA2	NM_000807.1	NM_000807.1		2555	4557600	NM_000807.1	GABRA2	NP_000798.1	ILMN_1659678	0000020152	S	1734	CTCATGGAACTGCAGACAGAAAGCACTCCATGCGAAAACAGCCATTGCCT	4	-	45946858-45946907	4p12b	Homo sapiens gamma-aminobutyric acid (GABA) A receptor, alpha 2 (GABRA2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Penetrating at least one phospholipid bilayer of a synaptic vesicle membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30285] [pmid 8391122] [evidence IDA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	Any process that modulates levels of neurotransmitter [goid 1505] [pmid 8391122] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [pmid 8391122] [evidence IMP]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [pmid 8391122] [evidence IMP]	Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-A receptors function as chloride channels [goid 4890] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity [goid 8503] [pmid 8391122] [evidence IMP]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Homo sapiens	RefSeq	NM_022810.1	ILMN_14307	SLC25A14	NM_003951.2	NM_003951.2		9016	6006039	NM_003951.2	SLC25A14	NP_003942.1	ILMN_1743770	0001710754	A	1497	CCCAGACTTGGGCTAGAGCAGAAGGCATAGGCCAGGGTGGTTATTGCTAT	X	+	129334918-129334967	Xq25h	Homo sapiens solute carrier family 25 (mitochondrial carrier, brain), member 14 (SLC25A14), nuclear gene encoding mitochondrial protein, transcript variant long, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9852133] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9852133] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9852133] [evidence TAS]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor [goid 9060] [pmid 9852133] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC149543; UCP5; BMCP1	MGC149543; UCP5; BMCP1
Homo sapiens	RefSeq	XM_940960.3	ILMN_36131	LOC645086	XM_940960.3	XM_940960.3		645086	169207607	XM_940960.3	LOC645086	XP_946053.1	ILMN_3291921	0000620411	M	715	AGCCTTATTGTTATAATGCACAGTGGAGGACTGCCTATAGAGCACAGACC				14q21.3a	PREDICTED: Homo sapiens hypothetical LOC645086 (LOC645086), mRNA.					
Homo sapiens	RefSeq	XM_940960.3	ILMN_36131	LOC645086	XM_940960.3	XM_940960.3		645086	169207607	XM_940960.3	LOC645086	XP_946053.1	ILMN_3215411	0005910671	A	304	AGGAGATTGCAAATCAACGTCTCACTTCCAAACAGGGGAAGAAGACAAGA				14q21.3a	PREDICTED: Homo sapiens hypothetical LOC645086 (LOC645086), mRNA.					
Homo sapiens	RefSeq	NM_022734.2	ILMN_9977	METT11D1	NM_022734.2	NM_022734.2		64745	71999136	NM_022734.2	METT11D1	NP_073571.1	ILMN_1782257	0001070288	A	1354	CCCGTATCACTCAGCCTGTCCTTAAACGGCCTCGCCATGTGCATTGTCAC	14	+	20534602-20534651	14q11.2c	Homo sapiens methyltransferase 11 domain containing 1 (METT11D1), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]		Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ20859	FLJ20859
Homo sapiens	RefSeq	XM_001713943.1	ILMN_336103	LOC100133189	XM_001713943.1	XM_001713943.1		100133189	169190080	XM_001713943.1	LOC100133189	XP_001713995.1	ILMN_3236524	0002190471	S	599	CGTGACTCCTGTGAAGGATCAGTTCACGAAAGCTCGGCAGCCTCTGCAAA	10	-	46676333-46676361:46691229-46691249	10q11.22a	PREDICTED: Homo sapiens similar to cathepsin L (LOC100133189), mRNA.					
Homo sapiens	RefSeq	NM_014496.1	ILMN_182274	RPS6KA6	NM_014496.2	NM_014496.2		27330	142369975	NM_014496.2	RPS6KA6	NP_055311.1	ILMN_1807968	0002510397	S	2263	CAAGCTTAGCCCAGCGACGGAGCATGAAAAAGCGAACATCAACTGGCCTG	X	-	83205943-83205992	Xq21.1e	Homo sapiens ribosomal protein S6 kinase, 90kDa, polypeptide 6 (RPS6KA6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10644430] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 10644430] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	RSK4	RSK4
Homo sapiens	RefSeq	NR_024443.1	ILMN_369846	LOC100133920	NR_024443.1	NR_024443.1		100133920	212720706	NR_024443.1	LOC100133920		ILMN_3234989	0003870564	S	1511	CCTGTCTCTTCAGTGTGGCATGTTCAGGAGGAAGGAAAGTAACCAGCGTC	9	+	69664431-69664480		Homo sapiens hypothetical protein LOC100133920 (LOC100133920), non-coding RNA.					
Homo sapiens	Unigene	Hs.553070	ILMN_111213	HS.553070	Hs.553070		Hs.553070		27790184	CB051897			ILMN_1828515	0005870465	S	149	CCCTATGCTAGATTGCAGGTTCCCAAAGGACTGGAAATGCTTCTGTTCCC	3	-	147373393-147373442		NISC_gl04c09.x1 NCI_CGAP_Lei2 Homo sapiens cDNA clone IMAGE:3289745 3, mRNA sequence					
Homo sapiens	RefSeq	NM_031952.2	ILMN_5516	SPATA9	NM_031952.2	NM_031952.2		83890	50659065	NM_031952.2	SPATA9	NP_114158.2	ILMN_1685272	0003120639	I	1214	GGGTTGGGGTGACAAGATTCTGCATGTCTAAGAAGCTCCCATGTGACACC	5	-	95016895-95016944	5q15c	Homo sapiens spermatogenesis associated 9 (SPATA9), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		FLJ35906; NYD-SP16	FLJ35906; NYD-SP16
Homo sapiens	RefSeq	XM_001715567.1	ILMN_343773	LOC728796	XM_001715567.1	XM_001715567.1		728796	169160926	XM_001715567.1	LOC728796	XP_001715619.1	ILMN_3225485	0006660523	A	745	GCGCATGTGCAGGAGGCGCCGGAGTTTCACTTTGTAACTTTTAAGTGGTC				1q42.12c	PREDICTED: Homo sapiens hypothetical LOC728796 (LOC728796), mRNA.					
Homo sapiens	RefSeq	NM_002641.1	ILMN_7877	PIGA	NM_002641.2	NM_002641.2		5277	110224461	NM_002641.2	PIGA	NP_002632.1	ILMN_1802390	0006900605	I	501	TGGCCCATGATGCTCTCTTCCACGCCAAGACAATGGGGCTTCAGACAGTC	X	-	15349602-15349651	Xp22.2	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class A (PIGA), transcript variant 1, mRNA.	An enzyme complex that catalyzes the transfer of GlcNAc from UDP-GlcNAc to an acceptor phosphatidylinositol, the first step in the production of GPI anchors for cell surface proteins. The complex contains PIG-A, PIG-C, PIG-H, PIG-Q, PIG-P, and DPM2 in human, and Eri1p, Gpi1p, Gpi2p, Gpi15p, Gpi19p, and Spt14p in budding yeast [goid 506] [pmid 16162815] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 16162815] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism [goid 9893] [pmid 16162815] [evidence TAS]; The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16162815] [evidence IPI]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + phosphatidylinositol = UDP + N-acetyl-D-glucosaminylphosphatidylinositol [goid 17176] [pmid 16162815] [evidence TAS]	GPI3; PIG-A	GPI3; PIG-A
Homo sapiens	RefSeq	NM_020710.1	ILMN_18678	LRRC47	NM_020710.1	NM_020710.1		57470	24308206	NM_020710.1	LRRC47	NP_065761.1	ILMN_1668484	0002000132	S	2429	CTGTACAGTCATGTGCCACGTAACAGCGTCTGGGTCAGTGACGGACACTT	1	-	3686813-3686862	1p36.32b	Homo sapiens leucine rich repeat containing 47 (LRRC47), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) [goid 4826] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA1185; RP1-286D6.3	KIAA1185; RP1-286D6.3
Homo sapiens	RefSeq	NM_001010931.1	ILMN_6596	HGF	NM_000601.4	NM_000601.4		3082	58533168	NM_000601.4	HGF	NP_000592.3	ILMN_1801586	0003130451	A	572	ACAAGGGAACAGTATCTATCACTAAGAGTGGCATCAAATGTCAGCCCTGG	7	-	81386530-81386579	7q21.11c-q21.11d	Homo sapiens hepatocyte growth factor (hepapoietin A; scatter factor) (HGF), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2531289] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 2531289] [evidence EXP]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [pmid 14679171] [evidence TAS]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 2531289] [evidence NAS]; The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands [goid 48012] [evidence IEA]; The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51450] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15167892] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 2531289] [evidence NAS]	F-TCF; HGFB; HPTA; SF	F-TCF; HGFB; HPTA; SF
Homo sapiens	RefSeq	NM_174893.1	ILMN_6984	C17ORF49	NM_174893.1	NM_174893.1		124944	52856420	NM_174893.1	C17orf49	NP_777553.1	ILMN_1763688	0002570035	S	620	TCCTGCTGAGCCTTCCACCTCTGACCTCTCACTGTTCATGCCGGACCTGT	17	+	6861356-6861405	17p13.1d	Homo sapiens chromosome 17 open reading frame 49 (C17orf49), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC49942	MGC49942
Homo sapiens	RefSeq	NM_005906.3	ILMN_166619	MAK	NM_005906.3	NM_005906.3		4117	31652253	NM_005906.3	MAK	NP_005897.1	ILMN_2209115	0001440044	S	3440	AGACACTTCGAACTTTGGGCTACTCTGTTTAAATCTGCCACTTTCTGGAC	6	-	10871282-10871331	6p24.2a	Homo sapiens male germ cell-associated kinase (MAK), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 2183027] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ417M14.2	dJ417M14.2
Homo sapiens	RefSeq	NM_001004306.1	ILMN_22256	CCDC144NL	NM_001004306.1	NM_001004306.1		339184	51972185	NM_001004306.1	CCDC144NL	NP_001004306.1	ILMN_1809491	0000270070	S	2371	GGGGACAGGTGGAGTTAGCCATGTCTCCTAGCTATGCTGGAAAGAGTCAG	17	-	20767093-20767142	17p11.2c-p11.2b	Homo sapiens coiled-coil domain containing 144 family, N-terminal like (CCDC144NL), mRNA.					
Homo sapiens	RefSeq	NM_144721.3	ILMN_12095	THAP6	NM_144721.3	NM_144721.3		152815	62821788	NM_144721.3	THAP6	NP_653322.1	ILMN_1661424	0005720070	S	3147	CCCAGGAAAGAACTGGCCTGTGTAAAGCAAAACCCAAGTCATCCCCCTCC	4	+	76673858-76673907	4q21.1a	Homo sapiens THAP domain containing 6 (THAP6), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [pmid 11256614] [evidence IDA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC30052	MGC30052
Homo sapiens	RefSeq	NM_032806.4	ILMN_2070	C3ORF39	NM_032806.4	NM_032806.4		84892	40255248	NM_032806.4	C3orf39	NP_116195.2	ILMN_1792415	0000060022	S	2261	AAGGGACCTGACTTCCCCTTCTCCCATCCTGAACATTTGTACCCCTGGAG	3	-	43121194-43121243	3p22.1a	Homo sapiens chromosome 3 open reading frame 39 (C3orf39), mRNA.				AGO61; FLJ14566	AGO61; FLJ14566
Homo sapiens	RefSeq	NM_015832.3	ILMN_13743	MBD2	NM_015832.3	NM_015832.3		8932	48255922	NM_015832.3	MBD2	NP_056647.1	ILMN_2387452	0004920291	A	870	TGCCTAGTAAATTACAGAAGAACAAACAGAGACTGCGAAACGATCCTCTC	18	-	51731379-51731428	18q21.2c	Homo sapiens methyl-CpG binding domain protein 2 (MBD2), transcript variant testis-specific, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [evidence IEA]; A compact and highly condensed form of chromatin [goid 792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10441743] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10441743] [evidence NAS]; Female behaviors associated with the care and rearing of offspring [goid 42711] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex, occurring at the level of an individual cell [goid 43623] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with satellite DNA, DNA containing highly repetitive sequences which makes up a large proportion of the eukaryotic genome [goid 3696] [pmid 9774669] [evidence TAS]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IEA]; Interacting selectively with a methylated cytosine/guanine dinucleotide [goid 8327] [evidence IEA]; Interacting selectively with a methylated cytosine/guanine dinucleotide [goid 8327] [pmid 10441743] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10441743] [evidence NAS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]; Interacting selectively with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme [goid 35197] [evidence IEA]	DKFZp586O0821; NY-CO-41; DMTase	DKFZp586O0821; NY-CO-41; DMTase
Homo sapiens	RefSeq	NM_015832.3	ILMN_13743	MBD2	NM_015832.3	NM_015832.3		8932	48255922	NM_015832.3	MBD2	NP_056647.1	ILMN_1717195	0006840487	I	1050	CCTACTCATCCAAGACCCAGCTTCATTGTCTCCATCTCTGGGAAGCCTGC	18	-	51729304-51729353	18q21.2c	Homo sapiens methyl-CpG binding domain protein 2 (MBD2), transcript variant testis-specific, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [evidence IEA]; A compact and highly condensed form of chromatin [goid 792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10441743] [evidence NAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10441743] [evidence NAS]; Female behaviors associated with the care and rearing of offspring [goid 42711] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex, occurring at the level of an individual cell [goid 43623] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with satellite DNA, DNA containing highly repetitive sequences which makes up a large proportion of the eukaryotic genome [goid 3696] [pmid 9774669] [evidence TAS]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IEA]; Interacting selectively with a methylated cytosine/guanine dinucleotide [goid 8327] [evidence IEA]; Interacting selectively with a methylated cytosine/guanine dinucleotide [goid 8327] [pmid 10441743] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10441743] [evidence NAS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]; Interacting selectively with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme [goid 35197] [evidence IEA]	DKFZp586O0821; NY-CO-41; DMTase	DKFZp586O0821; NY-CO-41; DMTase
Homo sapiens	RefSeq	XM_001716896.1	ILMN_344426	KLHL33	XM_001716896.1	XM_001716896.1		123103	169207004	XM_001716896.1	KLHL33	XP_001716948.1	ILMN_3187410	0004920161	A	2171	ATGAACTAAGGACTGATAGCTGGACTCACCTGGCACCCCTACCCTCCCCC	14	-	19967087-19967136	14q11.2b	PREDICTED: Homo sapiens kelch-like 33 (Drosophila) (KLHL33), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_939589.1	ILMN_166303	GRIP1	XM_001133901.1	XM_001133901.1		23426	113423814	XM_001133901.1	GRIP1	XP_001133901.1	ILMN_1699314	0000520253	S	2	TGGACCGCTTCCTGGGTTTTGTCAAGGCGATAAGAAGATCTAGGAGAAGA				12q14.3b-q14.3c	PREDICTED: Homo sapiens glutamate receptor interacting protein 1 (GRIP1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10197531] [evidence NAS]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 15572661] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 15572661] [evidence NAS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 15572661] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10197531] [evidence NAS]; Functions to provide a physical support for the assembly of a multiprotein receptor signaling complex [goid 30159] [pmid 10197531] [evidence NAS]; Interacting selectively with an androgen receptor [goid 50681] [pmid 15572661] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]		
Homo sapiens	RefSeq	NM_207343.1	ILMN_29644	RNF214	NM_207343.2	NM_207343.2		257160	116235450	NM_207343.2	RNF214	NP_997226.2	ILMN_1800420	0006940600	S	1918	CCTGCTCCACTGGCCCAAATCAGTACCCCAATGTTCTTGCCTTCTGCCCA	11	+	116658699-116658748	11q23.3b	Homo sapiens ring finger protein 214 (RNF214), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp547C195	
Homo sapiens	RefSeq	NM_207343.2	ILMN_29644	RNF214	NM_207343.2	NM_207343.2		257160	116235450	NM_207343.2	RNF214	NP_997226.2	ILMN_2357777	0001510286	A	2060	CAATGGCGTGTACCCATGTATTGCACAAGGAGTGTATCAAATTCTGGGCC	11	+	116659105-116659136:116661012-116661029	11q23.3b	Homo sapiens ring finger protein 214 (RNF214), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp547C195	
Homo sapiens	RefSeq	NM_199132.1	ILMN_4336	ZNF468	NM_199132.1	NM_199132.1		90333	57165429	NM_199132.1	ZNF468	NP_954583.1	ILMN_1782749	0000650136	A	3149	GTTAAGAGGATTGCACTGGGGGCCATGGCTCATGCCTGTAATTCCAGCAC	19	-	58034429-58034478	19q13.41a	Homo sapiens zinc finger protein 468 (ZNF468), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp781B1474; DKFZp781N07108	DKFZp781B1474; DKFZp781N07108
Homo sapiens	RefSeq	NM_199132.1	ILMN_4336	ZNF468	NM_199132.1	NM_199132.1		90333	57165429	NM_199132.1	ZNF468	NP_954583.1	ILMN_2406390	0003930010	A	3514	CTATCTTCTGACTTTATGATCCACCCGACTCCACCTCCCAAAGTGCTGAG	19	-	58034064-58034113	19q13.41a	Homo sapiens zinc finger protein 468 (ZNF468), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp781B1474; DKFZp781N07108	DKFZp781B1474; DKFZp781N07108
Homo sapiens	RefSeq	NM_002711.2	ILMN_27179	PPP1R3A	NM_002711.2	NM_002711.2		5506	34304342	NM_002711.2	PPP1R3A	NP_002702.1	ILMN_1741649	0001340035	S	5750	GGCCCAAATGAAGGCATGTCAGGAGAGTTAGAGGTGCATCACACATCCGC	7	-	113302596-113302645	7q31.1d	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 3A (glycogen and sarcoplasmic reticulum binding subunit, skeletal muscle) (PPP1R3A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]		PPP1R3; PP1G	PPP1R3; PP1G
Homo sapiens	RefSeq	XM_925915.1	ILMN_39356	LOC642387	XM_925915.1	XM_925915.1		642387	88973795	XM_925915.1	LOC642387	XP_931008.1	ILMN_1677320	0002570093	S	126	CAATGAAGTACAGGCTGATGTGAGCTCAGATGGAGATGAGGAGCTTGTTG	4	+	33883497-33883546		PREDICTED: Homo sapiens similar to heat shock protein 90Bf (LOC642387), mRNA.					
Homo sapiens	RefSeq	NM_052937.1	ILMN_7707	PCMTD1	NM_052937.1	NM_052937.1		115294	24308385	NM_052937.1	PCMTD1	NP_443169.1	ILMN_1737426	0003290187	S	3666	TCTAGCATCAGATCAATCCCAAGAATCCATCAGCAACCTCAGACCAACCC	8	-	52892908-52892957	8q11.23a	Homo sapiens protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 (PCMTD1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester [goid 4719] [evidence IEA]	FLJ10883	FLJ10883
Homo sapiens	RefSeq	XR_015500.2	ILMN_181994	LOC728380	XR_015500.2	XR_015500.2		728380	169169518	XR_015500.2	LOC728380		ILMN_3301872	0005720044	M	523	TGAGGCTTTGATGGCTCAATCTCTCGGTAAATATGGCATCATCTGCAGGG	6	-	17639288-17639337	6p22.3e	PREDICTED: Homo sapiens misc_RNA (LOC728380), miscRNA.					
Homo sapiens	RefSeq	XM_940734.1	ILMN_43103	LOC651561	XM_940734.1	XM_940734.1		651561	89037855	XM_940734.1	LOC651561	XP_945827.1	ILMN_1678035	0003140270	S	1128	CTGGGAAGGTGGCTGACATTGGAAGTTTGCCCTCTTTCTCCCATGCTGGG					PREDICTED: Homo sapiens similar to CG17265-PA (LOC651561), mRNA.					
Homo sapiens	RefSeq	NM_001010932.1	ILMN_14779	HGF	NM_001010932.1	NM_001010932.1		3082	58533169	NM_001010932.1	HGF	NP_001010932.1	ILMN_1790149	0002340292	A	141	ATCCGCCAGCCCGTCCAGCAGCACCATGTGGGTGACCAAACTCCTGCCAG	7	-	81399262-81399287:81399288-81399311	7q21.11c-q21.11d	Homo sapiens hepatocyte growth factor (hepapoietin A; scatter factor) (HGF), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2531289] [evidence EXP]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 2531289] [evidence EXP]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [evidence IEA]; A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell [goid 1837] [pmid 14679171] [evidence TAS]; The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 2531289] [evidence NAS]; The series of molecular signals generated as a consequence of the hepatocyte growth factor receptor binding to one of its physiological ligands [goid 48012] [evidence IEA]; The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 51450] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15167892] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 2531289] [evidence NAS]	F-TCF; HGFB; HPTA; SF	F-TCF; HGFB; HPTA; SF
Homo sapiens	RefSeq	NM_001555.2	ILMN_4473	IGSF1	NM_001555.2	NM_001555.2		3547	45505166	NM_001555.2	IGSF1	NP_001546.2	ILMN_1679299	0004120161	I	4218	CCCTGCAAGTCAGCCCCATCTGCTGTTCCTTGGTCTCTAATCACCTGAGC	X	-	130235329-130235378	Xq26.1c	Homo sapiens immunoglobulin superfamily, member 1 (IGSF1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11266516] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11266516] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11266516] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11266516] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11266516] [evidence IPI]; Interacting selectively with inhibin beta-A [goid 48186] [pmid 11266516] [evidence IDA]; Interacting selectively with inhibin beta-B [goid 48187] [pmid 11266516] [evidence IDA]	KIAA0364; INHBP; MGC75490; PGSF2; IGCD1; IGDC1	INHBP; MGC75490; PGSF2; KIAA0364; IGCD1; IGDC1
Homo sapiens	RefSeq	NM_205833.1	ILMN_4473	IGSF1	NM_001555.2	NM_001555.2		3547	45505166	NM_001555.2	IGSF1	NP_001546.2	ILMN_1657316	0006380519	A	723	TTACATCTGCCGCACTCATATCCAGATGCTCCCCACCCTGTGGTCAGAGC	X	-	130246863-130246912	Xq26.1c	Homo sapiens immunoglobulin superfamily, member 1 (IGSF1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11266516] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11266516] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11266516] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11266516] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11266516] [evidence IPI]; Interacting selectively with inhibin beta-A [goid 48186] [pmid 11266516] [evidence IDA]; Interacting selectively with inhibin beta-B [goid 48187] [pmid 11266516] [evidence IDA]	KIAA0364; INHBP; MGC75490; PGSF2; IGCD1; IGDC1	INHBP; MGC75490; PGSF2; KIAA0364; IGCD1; IGDC1
Homo sapiens	RefSeq	NM_004942.2	ILMN_182283	DEFB4	NM_004942.2	NM_004942.2		1673	13124885	NM_004942.2	DEFB4	NP_004933.1	ILMN_2048043	0002120091	S	66	CCTCTTCATATTCCTGATGCCTCTTCCAGGTGTTTTTGGTGGTATAGGCG	8	+	7752264-7752292:7753996-7754016	8p23.1e	Homo sapiens defensin, beta 4 (DEFB4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10521347] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10521347] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10521347] [evidence TAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		DEFB102; DEFB2; SAP1; DEFB-2; HBD-2	DEFB102; DEFB2; SAP1; DEFB-2; HBD-2
Homo sapiens	RefSeq	XM_941900.1	ILMN_35632	LOC652453	XM_941900.1	XM_941900.1		652453	88955156	XM_941900.1	LOC652453	XP_946993.1	ILMN_1674273	0002490673	S	1	ATGGCTGTGCCTGAAGACAATGAATTTCCACATGCAGAAGTTTCATGTGT					PREDICTED: Homo sapiens hypothetical protein LOC652453 (LOC652453), mRNA.					
Homo sapiens	RefSeq	NM_032780.2	ILMN_1263	TMEM25	NM_032780.2	NM_032780.2		84866	31377649	NM_032780.2	TMEM25	NP_116169.2	ILMN_1651745	0005820008	S	2153	CCTGGAGGATGGTCGCCACAGGCACATAATTCAACAGCTTTAGGGGAACA	11	+	117911504-117911553	11q23.3d	Homo sapiens transmembrane protein 25 (TMEM25), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ14399	FLJ14399
Homo sapiens	Unigene	Hs.568853	ILMN_121034	HS.568853	Hs.568853		Hs.568853		47307527	CN291113			ILMN_1898130	0005340598	S	307	GGGGCATCAGAGTCAAAGACTGCCAGAACACCCACACTGATCCTACCTGC	10	+	50350016-50350062:50350755-50350757		17000600021474 GRN_PRENEU Homo sapiens cDNA 5, mRNA sequence					
Homo sapiens	RefSeq	XM_944959.1	ILMN_138870	SLCO3A1	XM_944959.1	XM_944959.1		28232	89039269	XM_944959.1	SLCO3A1	XP_950052.1	ILMN_1667887	0007210598	I	100	TGTCACTCGTTGAGGTGGTGGCCTGGTTCCTTTGGCCTTAGGGAAGGACA				15q26.1d	PREDICTED: Homo sapiens solute carrier organic anion transporter family, member 3A1, transcript variant 4 (SLCO3A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Homo sapiens	RefSeq	NM_198156.1	ILMN_21388	VHL	NM_198156.1	NM_198156.1		7428	38045905	NM_198156.1	VHL	NP_937799.1	ILMN_2376625	0002480170	A	2721	GGCAGGCTGAGGTGAGAAGATCATTGGAGTTTAGGAATTGGAGGCTGCAG	3	+	10168638-10168687	3p25.3b	Homo sapiens von Hippel-Lindau tumor suppressor (VHL), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7604013] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12169691] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12169691] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7604013] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 7660122] [evidence TAS]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [pmid 12169691] [evidence NAS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10353251] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12169691] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 12169691] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7660130] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 12169691] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during angiogenesis [goid 43534] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 15824735] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [pmid 12169691] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 12169691] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 7660122] [evidence TAS]	HRCA1; RCA1; VHL1	HRCA1; VHL1; RCA1
Homo sapiens	RefSeq	NM_000551.2	ILMN_21388	VHL	NM_198156.1	NM_198156.1		7428	38045905	NM_198156.1	VHL	NP_937799.1	ILMN_1738579	0002490176	A	2525	TTCCTGTGCTCAAAAATGAGAGTGACGGCTGGCATGGTGGCTCCCGCCTG	3	+	10168442-10168491	3p25.3b	Homo sapiens von Hippel-Lindau tumor suppressor (VHL), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7604013] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12169691] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12169691] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7604013] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 7660122] [evidence TAS]; The developmental process by which the size or shape of a cell is generated and organized. Morphogenesis pertains to the creation of form [goid 902] [pmid 12169691] [evidence NAS]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10353251] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12169691] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 12169691] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7660130] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 12169691] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; The orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels during angiogenesis [goid 43534] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 15824735] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell differentiation [goid 45597] [pmid 12169691] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 12169691] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 7660122] [evidence TAS]	HRCA1; RCA1; VHL1	HRCA1; VHL1; RCA1
Homo sapiens	RefSeq	NM_052891.1	ILMN_3811	PGLYRP3	NM_052891.1	NM_052891.1		114771	16418404	NM_052891.1	PGLYRP3	NP_443123.1	ILMN_2046751	0000050431	S	1062	CCTCATTTCAAGCACTGAAGGAGGCCCCACTCCCTTTGAGACTGCCCTCC	1	-	153270399-153270431:153270432-153270448	1q21.3c	Homo sapiens peptidoglycan recognition protein 3 (PGLYRP3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11461926] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11461926] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [pmid 11461926] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 11461926] [evidence NAS]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [pmid 11461926] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides [goid 8745] [evidence IEA]; Combining with a peptidoglycan to initiate a change in cell activity [goid 16019] [pmid 11461926] [evidence IDA]	PGRPIA; MGC149197; PGRP-Ialpha	PGRPIA; MGC149197; PGRP-Ialpha
Homo sapiens	RefSeq	NM_052891.1	ILMN_3811	PGLYRP3	NM_052891.1	NM_052891.1		114771	16418404	NM_052891.1	PGLYRP3	NP_443123.1	ILMN_2046750	0006330040	S	607	CTGCTTGGGAAGCCAGAGAGACACACTGCCCTAAAATGAACCTCCCAGCC	1	-	153275009-153275058	1q21.3c	Homo sapiens peptidoglycan recognition protein 3 (PGLYRP3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11461926] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11461926] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of peptidoglycans, any of a class of glycoconjugates found in bacterial cell walls [goid 9253] [evidence IEA]; The series of events in which a stimulus from a bacterium is received and converted into a molecular signal [goid 16045] [pmid 11461926] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 11461926] [evidence NAS]; Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism [goid 50830] [pmid 11461926] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of the link between N-acetylmuramoyl residues and L-amino acid residues in certain bacterial cell-wall glycopeptides [goid 8745] [evidence IEA]; Combining with a peptidoglycan to initiate a change in cell activity [goid 16019] [pmid 11461926] [evidence IDA]	PGRPIA; MGC149197; PGRP-Ialpha	PGRPIA; MGC149197; PGRP-Ialpha
Homo sapiens	RefSeq	XR_017189.2	ILMN_165841	LOC646330	XR_017189.2	XR_017189.2		646330	169162805	XR_017189.2	LOC646330		ILMN_3213261	0003180475	A	1196	GCCAACGGCGCTGCCCAGTCAGACATCCAGACATCCTGACTCTGGAGGAG	1	-	24101084-24101133	1p36.11d	PREDICTED: Homo sapiens misc_RNA (LOC646330), miscRNA.					
Homo sapiens	RefSeq	XM_929970.1	ILMN_39819	TREML3	XM_929970.2	XM_929970.2		340206	113417508	XM_929970.2	TREML3	XP_935063.2	ILMN_1738220	0002470131	A	1018	CCAGGATGCCTCACATTTTCCCTGTTTGTTAGTGGTCTACCCGAGAGTCC	6	-	41284426-41284475	6p21.1g	PREDICTED: Homo sapiens triggering receptor expressed on myeloid cells-like 3 (TREML3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_021239.1	ILMN_18687	RBM25	NM_021239.1	NM_021239.1		58517	55741708	NM_021239.1	RBM25	NP_067062.1	ILMN_1768117	0002230424	S	4100	ACACACCTGGAGAGGACATTTGAAAACACTGTTCTTACCCTCGAACCCTG	14	+	72657673-72657722	14q24.2b	Homo sapiens RNA binding motif protein 25 (RBM25), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence NAS]	S164; MGC105088; RNPC7; MGC117168; RED120	S164; MGC105088; RNPC7; MGC117168; RED120
Homo sapiens	RefSeq	XM_941392.1	ILMN_138272	CLK2	XM_941392.1	XM_941392.1		1196	88952497	XM_941392.1	CLK2	XP_946485.1	ILMN_1787109	0004200497	A	1795	GGGATATCAGTCGGTGACGATCAGGCCCTGGGCCCCCCTGCATCTTTTAT				1q22a	PREDICTED: Homo sapiens CDC-like kinase 2, transcript variant 3 (CLK2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 7990150] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_015441.1	ILMN_572	OLFML2B	NM_015441.1	NM_015441.1		25903	46195718	NM_015441.1	OLFML2B	NP_056256.1	ILMN_1765557	0007150019	S	2922	TGACCAGTAACCACCTTCCTTCAAGCCTTCAGCCCCTCCAGCTCCAAGTC	1	-	161953170-161953219	1q23.3b	Homo sapiens olfactomedin-like 2B (OLFML2B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants) [goid 31012] [evidence IEA]		Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with a component of the extracellular matrix [goid 50840] [evidence IEA]	RP11-227F8.1; MGC51337	RP11-227F8.1; MGC51337
Homo sapiens	RefSeq	NM_138337.4	ILMN_21950	CLEC12A	NM_138337.4	NM_138337.4		160364	94557289	NM_138337.4	CLEC12A	NP_612210.4	ILMN_2292178	0001340500	I	285	CCCTCTCATGTATGGCGTCCAGCAGCCTTGTTTCTGACTCTTCTGTGCCT	12	+	10022843-10022892	12p13.2c	Homo sapiens C-type lectin domain family 12, member A (CLEC12A), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLL1; MICL; CLL-1; DCAL-2; MGC70602	CLL1; MICL; CLL-1; DCAL-2; MGC70602
Homo sapiens	RefSeq	NM_138337.4	ILMN_21950	CLEC12A	NM_138337.4	NM_138337.4		160364	94557289	NM_138337.4	CLEC12A	NP_612210.4	ILMN_2403228	0003780358	A	1207	GAACCCTGGAGGAAGAGGAAGTCCATTCAGATAGTTGTGGGGGGCCTTCG	12	+	10029119-10029168	12p13.2c	Homo sapiens C-type lectin domain family 12, member A (CLEC12A), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLL1; MICL; CLL-1; DCAL-2; MGC70602	CLL1; MICL; CLL-1; DCAL-2; MGC70602
Homo sapiens	RefSeq	NM_002765.2	ILMN_23417	PRPS2	NM_001039091.1	NM_001039091.1		5634	84875538	NM_001039091.1	PRPS2	NP_001034180.1	ILMN_1758104	0000130619	S	2250	CTGAATGGGGGTGGACCTGGCATTTATCTGGCCAAAAACAGGAGCCAGAG	X	+	12751996-12752045	Xp22.2	Homo sapiens phosphoribosyl pyrophosphate synthetase 2 (PRPS2), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9156] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells [goid 44249] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 2538352] [evidence TAS]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9156] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells [goid 44249] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [pmid 2538352] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRS II; PRSII	PRS II; PRSII
Homo sapiens	RefSeq	NM_001039091.1	ILMN_23417	PRPS2	NM_001039091.1	NM_001039091.1		5634	84875538	NM_001039091.1	PRPS2	NP_001034180.1	ILMN_2399431	0007000521	A	2188	TGCTGCTCCTGGCGTGGAAACTTAAGTGAGACCACCAAATACATTGGTCC	X	+	12751934-12751983	Xp22.2	Homo sapiens phosphoribosyl pyrophosphate synthetase 2 (PRPS2), transcript variant 1, mRNA.		The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9156] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells [goid 44249] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 2538352] [evidence TAS]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a ribonucleoside monophosphate, a glycosamine consisting of a base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9156] [evidence IEA]; The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates) [goid 9165] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells [goid 44249] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + D-ribose 5-phosphate = AMP + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4749] [pmid 2538352] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRS II; PRSII	PRS II; PRSII
Homo sapiens	RefSeq	NM_018498.2	ILMN_28957	PPP4R1L	NM_018498.2	NM_018498.2		55370	56687502	NM_018498.2	PPP4R1L	NP_060968.2	ILMN_2211922	0005050750	S	2204	ACCACAGTCTCCGGGGAGACATTCATTTTCAGATGAAGACAGGGCTTGAG	20	-	56246452-56246501	20q13.32a	Homo sapiens protein phosphatase 4, regulatory subunit 1-like (PPP4R1L), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	C20orf192; PRO1085	C20orf192; PRO1085
Homo sapiens	RefSeq	XM_001723105.1	ILMN_352586	LOC100130776	XM_001723105.1	XM_001723105.1		100130776	169205559	XM_001723105.1	LOC100130776	XP_001723157.1	ILMN_3273340	0000460189	M	1349	TGGGGGTAGGGAAAGCAGAGGGTGGGGGGCAGCAGGAAGCCCGAGCACAT				12q14.1a	PREDICTED: Homo sapiens similar to hCG2014417 (LOC100130776), mRNA.					
Homo sapiens	RefSeq	XM_940825.1	ILMN_42093	DLGAP3	XM_940825.2	XM_940825.2		58512	113412109	XM_940825.2	DLGAP3	XP_945918.1	ILMN_1671626	0000450048	A	3340	TGGCTTTTTATGAAGAATCCCGAACCCTGCCTAGGAGCCCGCCCCACCCT				1p34.3f	PREDICTED: Homo sapiens discs, large (Drosophila) homolog-associated protein 3 (DLGAP3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	Any process that mediates the transfer of information from one cell to another [goid 7267] [evidence IEA]			
Homo sapiens	RefSeq	XM_496054.2	ILMN_46682	DKFZP434L187	XM_496054.2	XM_496054.2		26082	89038211	XM_496054.2	DKFZP434L187	XP_496054.1	ILMN_1669413	0006220162	S	3988	GTTTGGGCAACAGATGGTCAGGGGAGGTGCTGGTGCAGACGGGCTCAGTA	15	+	28293699-28293748		PREDICTED: Homo sapiens DKFZP434L187 protein (DKFZP434L187), mRNA.					
Homo sapiens	RefSeq	NM_198333.1	ILMN_27622	P2RY10	NM_198333.1	NM_198333.1		27334	38327547	NM_198333.1	P2RY10	NP_938147.1	ILMN_2321578	0001980184	A	992	CCATCATTAGCAGTTGTCCCGTTGTCCGAATCGCACTGTATTTCCACCCT	X	+	78103488-78103537	Xq21.1b	Homo sapiens purinergic receptor P2Y, G-protein coupled, 10 (P2RY10), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y10	P2Y10
Homo sapiens	RefSeq	XM_931726.1	ILMN_31159	LOC642969	XM_931726.1	XM_931726.1		642969	89035647	XM_931726.1	LOC642969	XP_936819.1	ILMN_1698304	0004890070	A	414	CCGACCATCCTTTCTACAGCAACATCAGTAAGGTCTCTCTGAAGAGGCTA	12	-	92558880-92558899:92559081-92559110	12q22b	PREDICTED: Homo sapiens similar to Phosphoglycerate mutase 1 (Phosphoglycerate mutase isozyme B) (PGAM-B) (BPG-dependent PGAM 1), transcript variant 3 (LOC642969), mRNA.					
Homo sapiens	RefSeq	NM_001042533.1	ILMN_170289	MINA	NM_001042533.1	NM_001042533.1		84864	110227618	NM_001042533.1	MINA	NP_001035998.1	ILMN_2322986	0005420019	A	4609	CCAGGGACACAACATTGGGTATCATCAAAGGCCCACCTTTAACATCAAGG	3	-	99143963-99144012	3q11.2c	Homo sapiens MYC induced nuclear antigen (MINA), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process of the formation of the constituents of the ribosome subunits, their assembly, and their transport to the sites of protein synthesis [goid 42254] [evidence IEA]		NO52; FLJ14393; DKFZp762O1912; MDIG; MINA53	NO52; FLJ14393; DKFZp762O1912; MDIG; MINA53
Homo sapiens	RefSeq	NM_001076552.1	ILMN_172842	ACSS2	NM_001076552.1	NM_001076552.1		55902	115527107	NM_001076552.1	ACSS2	NP_001070020.1	ILMN_2336595	0004490524	A	2799	GTTTTCTTGCCCCAGTCAGGCTCAAGCCCTGTGGTTGTAGGAATAAAGCC	20	+	32979363-32979412	20q11.22b	Homo sapiens acyl-CoA synthetase short-chain family member 2 (ACSS2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10843999] [evidence IC ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10843999] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [pmid 10843999] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [pmid 10843999] [evidence IDA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [pmid 10843999] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [pmid 10843999] [evidence IC ]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]	AceCS; ACAS2; ACS; ACSA; dJ1161H23.1; DKFZp762G026	AceCS; ACAS2; ACS; ACSA; dJ1161H23.1; DKFZp762G026
Homo sapiens	RefSeq	NM_001076552.1	ILMN_172842	ACSS2	NM_001076552.1	NM_001076552.1		55902	115527107	NM_001076552.1	ACSS2	NP_001070020.1	ILMN_2254962	0003310019	I	131	CTTCCTGCCTTGACAGCCAGTCTGTGAAATGATGGTGAGGTGGGCACTTC	20	+	32926536-32926563:32926564-32926585	20q11.22b	Homo sapiens acyl-CoA synthetase short-chain family member 2 (ACSS2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10843999] [evidence IC ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10843999] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [pmid 10843999] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [pmid 10843999] [evidence IDA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [pmid 10843999] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [pmid 10843999] [evidence IC ]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Interacting selectively with AMP, adenosine monophosphate [goid 16208] [evidence IEA]	AceCS; ACAS2; ACS; ACSA; dJ1161H23.1; DKFZp762G026	AceCS; ACAS2; ACS; ACSA; dJ1161H23.1; DKFZp762G026
Homo sapiens	RefSeq	XM_001719127.1	ILMN_340950	LOC100130168	XM_001719127.1	XM_001719127.1		100130168	169206282	XM_001719127.1	LOC100130168	XP_001719179.1	ILMN_3183544	0005960646	A	1585	TGAACCTGGTAGGTGGAGGTTGCGGTGAGCCGAGATCATGCCACTGTGCT				13q33.1b	PREDICTED: Homo sapiens hypothetical protein LOC100130168 (LOC100130168), mRNA.					
Homo sapiens	RefSeq	NM_032439.1	ILMN_22045	PHYHIPL	NM_032439.1	NM_032439.1		84457	33469020	NM_032439.1	PHYHIPL	NP_115815.1	ILMN_1678710	0000870048	S	987	GCCACCCCAGGATTCACCTTATGGAAGATACAGGTTTGAGATTGCCGCAG	10	+	60674946-60674995	10q21.1f	Homo sapiens phytanoyl-CoA 2-hydroxylase interacting protein-like (PHYHIPL), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]			KIAA1796	KIAA1796
Homo sapiens	RefSeq	NM_032440.1	ILMN_173510	LCOR	NM_032440.1	NM_032440.1		84458	39930472	NM_032440.1	LCOR	NP_115816.1	ILMN_2062381	0007150554	S	4764	GTGAAGCATGGTTGAAATTAGCTAGTGGTCCCTTTTGAATTTCATGAGCC	10	+	98708585-98708634	10q24.1a-q24.1b	Homo sapiens ligand dependent nuclear receptor corepressor (LCOR), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	FLJ38026; MLR2; KIAA1795; RP11-175O19.1	FLJ38026; MLR2; KIAA1795; RP11-175O19.1
Homo sapiens	RefSeq	NM_005279.2	ILMN_16670	GPR1	NM_005279.2	NM_005279.2		2825	36951011	NM_005279.2	GPR1	NP_005270.2	ILMN_2107004	0003870386	S	1734	GTCATGGTGGTGCATGTCTGCAAACCCAGCTACTCGGGAGGCTGAAGCAG	2	-	206748576-206748625	2q33.3b	Homo sapiens G protein-coupled receptor 1 (GPR1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7851889] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7851889] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	NM_030765.2	ILMN_24050	B3GNT4	NM_030765.2	NM_030765.2		79369	42544235	NM_030765.2	B3GNT4	NP_110392.1	ILMN_1771260	0002350338	S	1278	CTCGAGATGTGGACCATGTGGGCACTGGTGACAGATGAGGGGCTCAAGTG	12	+	121257811-121257860	12q24.31c	Homo sapiens UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 (B3GNT4), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	B3GN-T4; beta3Gn-T4	B3GN-T4; beta3Gn-T4
Homo sapiens	RefSeq	NM_198289.1	ILMN_6735	CIDEA	NM_001279.2	NM_001279.2		1149	38158008	NM_001279.2	CIDEA	NP_001270.1	ILMN_1788184	0000010048	A	913	CAGGCGTGCCCAGGAGCGTGTGCATGTGTCAGAGCCATTTGGTCCATCAT	18	+	12267509-12267558	18p11.21e	Homo sapiens cell death-inducing DFFA-like effector a (CIDEA), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space [goid 5740] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A homeostatic process by which an organism modulates its internal body temperature [goid 1659] [evidence IEA]; The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 9564035] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 9564035] [evidence TAS]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [evidence IEA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of any TGF-beta receptor signaling pathway [goid 30512] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [pmid 15919794] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [pmid 15919794] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids [goid 50995] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CIDE-A	CIDE-A
Homo sapiens	RefSeq	XM_928447.1	ILMN_38223	LOC442366	XM_928447.1	XM_928447.1		442366	89025616	XM_928447.1	LOC442366	XP_933540.1	ILMN_1666718	0002140747	S	543	GGCTCCGGACACAGGAGTTACCTGGACCCAGCAGGGGAAACACAGCTGCT	7	-	158477947-158477996	7q36.3e	PREDICTED: Homo sapiens hypothetical LOC442366 (LOC442366), mRNA.					
Homo sapiens	RefSeq	XM_001714158.1	ILMN_347678	LOC100134011	XM_001714158.1	XM_001714158.1		100134011	169215196	XM_001714158.1	LOC100134011	XP_001714210.1	ILMN_3245752	0002190279	S	1422	GGTCATCATGTGCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAAAAG					PREDICTED: Homo sapiens similar to PR domain containing 15 (LOC100134011), mRNA.					
Homo sapiens	RefSeq	NM_018390.1	ILMN_8273	PLCXD1	NM_018390.2	NM_018390.2		55344	94158612	NM_018390.2	PLCXD1	NP_060860.1	ILMN_1747451	0003850064	S	1838	GTACCCGGTTGCTACGGTGAAATGAAGGTGCCCCGCATCCAGAAAGACGC	XY	+	149851-149885:149702-149716	Xp22.33f,Yp11.32c	Homo sapiens phosphatidylinositol-specific phospholipase C, X domain containing 1 (PLCXD1), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate [goid 4629] [evidence IEA]	LL0XNC01-136G2.1; FLJ11323	LL0XNC01-136G2.1; FLJ11323
Homo sapiens	RefSeq	XM_944541.1	ILMN_46581	LOC645946	XM_933286.1	XM_933286.1		645946	89034162	XM_933286.1	LOC645946	XP_938379.1	ILMN_1705702	0006040246	S	209	CAAGCCAGTCCCCGCCTCCCGACAGGATCTTGGAGGCGGCCGGCGACTGC	11	-	75834437-75834486	11q13.5b	PREDICTED: Homo sapiens hypothetical LOC645946 (LOC645946), mRNA.					
Homo sapiens	Unigene	Hs.583553	ILMN_135734	HS.583553	Hs.583553		Hs.583553		793327	R36426			ILMN_1886559	0005560259	S	275	GAGACAGAGTTTTCGCTCTTGTCACCCACTGCGCTCCAGCCTTAGCGACA	7	-	149601331-149601357:149603709-149603731		yh92f05.r1 Soares placenta Nb2HP Homo sapiens cDNA clone IMAGE:137217 5, mRNA sequence					
Homo sapiens	RefSeq	XM_930008.1	ILMN_307409	LOC645037	NM_001098411.1	NM_001098411.1		645037	148529017	NM_001098411.1	LOC645037	NP_001091881.1	ILMN_1674097	0002350553	I	13	TGTGAGGCAGTGCTGTGTGGTTCCTGCCGTCCGGACTCTTTTTCCTCTAT	X	+	49122664-49122713	Xp11.23b	Homo sapiens similar to GAGE-2 protein (G antigen 2) (LOC645037), mRNA.					
Homo sapiens	RefSeq	XM_939870.1	ILMN_35163	LOC650787	XM_939870.1	XM_939870.1		650787	89036257	XM_939870.1	LOC650787	XP_944963.1	ILMN_1752646	0001580632	S	121	TGGGAGGACTCCAGCTCCTTTTCTCCACCCCACAGCTGCTCCTGCGATGC					PREDICTED: Homo sapiens similar to CG3328-PA (LOC650787), mRNA.					
Homo sapiens	RefSeq	NM_014520.1	ILMN_183476	MYBBP1A	NM_014520.2	NM_014520.2		10514	142351641	NM_014520.2	MYBBP1A	NP_055335.1	ILMN_1806757	0006250072	S	4092	AATACGCAAGCTGTTTCTAAGGCGCTGCCACTGGGGAGGGTGGCTGTTGC				17p13.2c	Homo sapiens MYB binding protein (P160) 1a (MYBBP1A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A protein complex which usually consists of three components, e.g. in Xenopus, the importin alpha and beta-subunits and any protein which has a nuclear localization sequence (NLS). The complex acts to import proteins with an NLS into the nucleus through a nuclear pore [goid 42564] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10644447] [evidence TAS]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10644447] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]	PAP2; P160; FLJ37886	P160; PAP2
Homo sapiens	RefSeq	XM_001720401.1	ILMN_349210	LOC100132518	XM_001720401.1	XM_001720401.1		100132518	169169958	XM_001720401.1	LOC100132518	XP_001720453.1	ILMN_3246885	0003120112	S	61	CCTCAGCCTCCCGAGTAGCTGGGATTACAGGTAAGTGCCACCACACCCAG	7	-	73440-73489	7p22.3d	PREDICTED: Homo sapiens hypothetical protein LOC100132518 (LOC100132518), mRNA.					
Homo sapiens	RefSeq	NM_017700.1	ILMN_6204	FLJ20184	NM_017700.1	NM_017700.1		54848	8923172	NM_017700.1	FLJ20184	NP_060170.1	ILMN_2179915	0002710280	S	1165	GCACATGGGTTAATGGAGTTAGGGGAATGGCCTACAACTCTGCATGGCCG	4	+	106552565-106552614	4q24d	Homo sapiens hypothetical protein FLJ20184 (FLJ20184), mRNA.					
Homo sapiens	RefSeq	XR_038027.1	ILMN_345233	LOC100129559	XR_038027.1	XR_038027.1		100129559	169165307	XR_038027.1	LOC100129559		ILMN_3264822	0000270528	M	395	GGACTGTGATGTCACTCAAAGGGGACAACGGACACAAATGTAGGCCTCTG	3	-	159810410-159810459	3q25.32b	PREDICTED: Homo sapiens misc_RNA (LOC100129559), partial miscRNA.					
Homo sapiens	RefSeq	XR_038027.1	ILMN_345233	LOC100129559	XR_038027.1	XR_038027.1		100129559	169165307	XR_038027.1	LOC100129559		ILMN_3188357	0002630465	A	335	CAAAGCCTAAACCAAGCTGCCCCCAAACTAAAGAGGTTCTCTGCAACTGC	3	-	159810470-159810519	3q25.32b	PREDICTED: Homo sapiens misc_RNA (LOC100129559), partial miscRNA.					
Homo sapiens	RefSeq	XR_037399.1	ILMN_339615	LOC100130488	XR_037399.1	XR_037399.1		100130488	169163286	XR_037399.1	LOC100130488		ILMN_3258439	0006960224	M	1554	CATGAATAAAACCTTTAGAATTGGAACTACAAAAAACAGTGCATACATAC	2	-	94764204-94764253	2q11.1b	PREDICTED: Homo sapiens misc_RNA (LOC100130488), miscRNA.					
Homo sapiens	RefSeq	NM_183372.3	ILMN_10536	LOC200030	NM_183372.3	NM_183372.3		200030	119709824	NM_183372.3	LOC200030	NP_899228.3	ILMN_2177090	0001410309	S	4387	ACCTCAGCCCATCTGCGGGCAGAGAAGGTCTAGTTTGTCCAACACCATTA	1	-	146032991-146033040	1q21.1c	Homo sapiens neuroblastoma breakpoint family, member 11-like (LOC200030), mRNA.				NBG	NBG
Homo sapiens	RefSeq	NM_183372.3	ILMN_10536	LOC200030	NM_183372.3	NM_183372.3		200030	119709824	NM_183372.3	LOC200030	NP_899228.3	ILMN_3238116	0004780279	S	4708	ACATTCTTTGCCTGAGTTTTAATTTTTGTCCAAAGTTAATTTTAATCTAT	1	-	146032670-146032719	1q21.1c	Homo sapiens neuroblastoma breakpoint family, member 11-like (LOC200030), mRNA.				NBG	NBG
Homo sapiens	RefSeq	NM_015296.1	ILMN_12914	DOCK9	NM_015296.1	NM_015296.1		23348	24308028	NM_015296.1	DOCK9	NP_056111.1	ILMN_1773413	0002230044	S	6320	ACGCCATCAGTGGGACTCCAACAAGCACAATGGTTCACGGGATGACCAGC	13	-	98244898-98244947	13q32.3a	Homo sapiens dedicator of cytokinesis 9 (DOCK9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]	RP11-155N3.2; DKFZp686C11110; zizimin1; FLJ45601; KIAA1058; KIAA1085; FLJ16744; ZIZ1; DKFZp686N04132; FLJ44528; FLJ45282; DKFZp686D2047	RP11-155N3.2; DKFZp686C11110; zizimin1; FLJ45601; KIAA1058; KIAA1085; FLJ16744; ZIZ1; DKFZp686N04132; FLJ44528; FLJ45282; DKFZp686D2047
Homo sapiens	RefSeq	NM_002803.2	ILMN_5792	PSMC2	NM_002803.2	NM_002803.2		5701	24430152	NM_002803.2	PSMC2	NP_002794.1	ILMN_1768784	0004230296	S	1231	CGTCTGCACAGAGGCTGGTATGTTTGCCATCAGAGCACGGCGAAAAATTG	7	+	102795596-102795645	7q22.1g	Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 2 (PSMC2), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 9295362] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9295362] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 9295362] [evidence IDA]	MGC3004; Nbla10058; MSS1; S7	MGC3004; Nbla10058; MSS1; S7
Homo sapiens	RefSeq	NM_170724.1	ILMN_5814	PKHD1	NM_170724.2	NM_170724.2		5314	126131103	NM_170724.2	PKHD1	NP_733842.2	ILMN_1701562	0005360753	I	11367	GATACAGTGTGATTTGAGGAATTGGTTCCCCCAGAGCCTTATTGACCCTC	6	-	51889864-51889913	6p12.2a	Homo sapiens polycystic kidney and hepatic disease 1 (autosomal recessive) (PKHD1), transcript variant 2, mRNA.	A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [pmid 14983006] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 16243292] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [pmid 11919560] [evidence TAS]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISS]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 11919560] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11919560] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16243292] [evidence IPI]	TIGM1; FCYT; DKFZp686C01112; ARPKD; FLJ46150	ARPKD; TIGM1; FCYT
Homo sapiens	RefSeq	NM_170724.1	ILMN_5814	PKHD1	NM_170724.2	NM_170724.2		5314	126131103	NM_170724.2	PKHD1	NP_733842.2	ILMN_1749579	0000070360	A	10007	TGTGGCCTGTATTCACCTCAGAACCAAATCAGTGGCCTCAGGAGCCATGG	6	-	51893130-51893149:51897828-51897857	6p12.2a	Homo sapiens polycystic kidney and hepatic disease 1 (autosomal recessive) (PKHD1), transcript variant 2, mRNA.	A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [pmid 14983006] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 16243292] [evidence IDA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane, with the bulk of the gene product located on the side opposite to the side that faces the cytoplasm. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 31362] [pmid 11919560] [evidence TAS]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence ISS]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 11919560] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11919560] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16243292] [evidence IPI]	TIGM1; FCYT; DKFZp686C01112; ARPKD; FLJ46150	ARPKD; TIGM1; FCYT
Homo sapiens	RefSeq	XR_037172.1	ILMN_345406	LOC647886	XR_037172.1	XR_037172.1		647886	169178688	XR_037172.1	LOC647886		ILMN_3244019	0004260440	S	1736	CTGGGCACACGCACCTCCTTTCTGGCCGTCTTCTGTGTAGGGCACACTTT					PREDICTED: Homo sapiens misc_RNA (LOC647886), miscRNA.					
Homo sapiens	RefSeq	NM_018404.1	ILMN_26473	ADAP2	NM_018404.2	NM_018404.2		55803	93102369	NM_018404.2	ADAP2	NP_060874.1	ILMN_1763000	0003990433	S	2626	GCTGGGTTGTGCATTAAGGGCCAGTTTACTTGTCTGCCTCTTTGACCACC	17	+	26310214-26310263	17q11.2c	Homo sapiens ArfGAP with dual PH domains 2 (ADAP2), mRNA.				cent-b; HSA272195	cent-b; HSA272195
Homo sapiens	RefSeq	NM_147189.1	ILMN_20693	FAM110B	NM_147189.2	NM_147189.2		90362	83281205	NM_147189.2	FAM110B	NP_671722.1	ILMN_1679217	0003800369	S	3249	CAAGTGGTTTGCCTCATTGCCTTTGCCACATCTGAAGTTCTCAGCAGCAC	8	+	59061158-59061207	8q12.1c	Homo sapiens family with sequence similarity 110, member B (FAM110B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]			FAM110B; MGC39325; C8orf72	MGC39325
Homo sapiens	Unigene	Hs.575024	ILMN_127205	HS.575024	Hs.575024		Hs.575024		75965845	DT932589			ILMN_1906482	0003610307	S	635	GTGGGGCTGGCACAGAGGCACAGGTGAGCTTGGCGTTTAAGGTGAACAGT	3	+	131599259-131599308		MGC8.7.1.1.1.E08.F.1 NIH_MGC_331 Homo sapiens cDNA clone MGC8.7.1.1.1.E08, mRNA sequence					
Homo sapiens	RefSeq	NM_001042424.1	ILMN_176865	WHSC1	NM_001042424.1	NM_001042424.1		7468	109633018	NM_001042424.1	WHSC1	NP_001035889.1	ILMN_2296335	0000110717	I	95	CTCCCAGCCTGCCGCTCCGGAGAGCCGCCCGCCGAGGATGCGACGCACCG	4	+	1843015-1843064	4p16.3b	Homo sapiens Wolf-Hirschhorn syndrome candidate 1 (WHSC1), transcript variant 10, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9618163] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRX5; REIIBP; NSD2; WHS; MGC176638; FLJ23286; KIAA1090; MMSET	TRX5; REIIBP; NSD2; WHS; MGC176638; FLJ23286; KIAA1090; MMSET
Homo sapiens	RefSeq	NM_002581.3	ILMN_177957	PAPPA	NM_002581.3	NM_002581.3		5069	38045914	NM_002581.3	PAPPA	NP_002572.2	ILMN_1721770	0000730754	S	10564	CACAATTCCAATCCTTTTTCTGTACCTCACGCGCATAAATTTGCTGCTCC	9	+	118204015-118204064	9q33.1a-q33.1b	Homo sapiens pregnancy-associated plasma protein A, pappalysin 1 (PAPPA), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10077652] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10913121] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 10077652] [evidence NAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 10913121] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [pmid 10913121] [evidence NAS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [pmid 10077652] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10077652] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10913121] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DIPLA1; IGFBP-4ase; ASBABP2; PAPPA1; PAPA; PAPP-A	DIPLA1; IGFBP-4ase; ASBABP2; PAPPA1; PAPA; PAPP-A
Homo sapiens	RefSeq	NM_145691.3	ILMN_23038	ATPAF2	NM_145691.3	NM_145691.3		91647	52426740	NM_145691.3	ATPAF2	NP_663729.1	ILMN_1727390	0003780239	S	1396	CTCCCATGGCGTGTTTGGATATCTGCTGCCTGTGGTCAGGAACCTTGCAC	17	-	17921440-17921489	17p11.2g	Homo sapiens ATP synthase mitochondrial F1 complex assembly factor 2 (ATPAF2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [pmid 11256614] [evidence IDA]	The aggregation, arrangement and bonding together of a proton-transporting ATP synthase (also known as F-type ATPase), a two-sector ATPase found in the inner membrane of mitochondria and chloroplasts, and in bacterial plasma membranes [goid 43461] [pmid 14757859] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11410595] [evidence IPI]	LP3663; ATP12p; MGC29736; ATP12	LP3663; ATP12p; MGC29736; ATP12
Homo sapiens	RefSeq	NM_003603.4	ILMN_24126	SORBS2	NM_003603.4	NM_003603.4		8470	77404350	NM_003603.4	SORBS2	NP_003594.2	ILMN_2407879	0002750170	A	4538	CATCGTTGAGTAGCCTACCTTGATTTCTGTCAAGTTCATAACCAGCTTCA	4	-	186743943-186743992	4q35.1f	Homo sapiens sorbin and SH3 domain containing 2 (SORBS2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9211900] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9211900] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 9211900] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9211900] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9211900] [evidence NAS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 9211900] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 9211900] [evidence TAS]	PRO0618; KIAA0777; ARGBP2	PRO0618; KIAA0777; ARGBP2
Homo sapiens	RefSeq	NM_003603.4	ILMN_24126	SORBS2	NM_003603.4	NM_003603.4		8470	77404350	NM_003603.4	SORBS2	NP_003594.2	ILMN_1716407	0002000630	A	4366	GCAGACTAGCCTCTCCTTATCTCACAGATCACAAGCACCCCTAGATAGTG	4	-	186744115-186744164	4q35.1f	Homo sapiens sorbin and SH3 domain containing 2 (SORBS2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9211900] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9211900] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 9211900] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9211900] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9211900] [evidence NAS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 9211900] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 9211900] [evidence TAS]	PRO0618; KIAA0777; ARGBP2	PRO0618; KIAA0777; ARGBP2
Homo sapiens	RefSeq	NM_003603.4	ILMN_24126	SORBS2	NM_003603.4	NM_003603.4		8470	77404350	NM_003603.4	SORBS2	NP_003594.2	ILMN_1693183	0001230445	I	1616	GAGCCCTGGTATAAATTCTTTTCAGAACTGGAGTTTGGACGCCCGCCTCC	4	-	186793555-186793559:186796227-186796271	4q35.1f	Homo sapiens sorbin and SH3 domain containing 2 (SORBS2), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9211900] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9211900] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 9211900] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9211900] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9211900] [evidence NAS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 9211900] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 9211900] [evidence TAS]	PRO0618; KIAA0777; ARGBP2	PRO0618; KIAA0777; ARGBP2
Homo sapiens	RefSeq	XR_039487.1	ILMN_344773	LOC100128469	XR_039487.1	XR_039487.1		100128469	169166007	XR_039487.1	LOC100128469		ILMN_3264262	0001340333	M	285	CATCCAACAATCCAAAGAGGGAAGAACTATTAGCTGCTCTGCGCATGTGC				3q25.1b	PREDICTED: Homo sapiens misc_RNA (LOC100128469), miscRNA.					
Homo sapiens	RefSeq	XR_039487.1	ILMN_344773	LOC100128469	XR_039487.1	XR_039487.1		100128469	169166007	XR_039487.1	LOC100128469		ILMN_3187792	0004540343	A	724	CCCCCTCCTCCTGGATGATGCCAATGGGATGTGCTCCTGGAATGAGGCTG				3q25.1b	PREDICTED: Homo sapiens misc_RNA (LOC100128469), miscRNA.					
Homo sapiens	RefSeq	NM_001013842.1	ILMN_17885	C8ORF58	NM_001013842.1	NM_001013842.1		541565	62241035	NM_001013842.1	C8orf58	NP_001013864.1	ILMN_1764320	0001710386	S	1732	AGCCCTGGGACAGAGAACGGTGTGGCTTTGGCTGCCTCTGCATGGAATCT	8	+	22461341-22461390	8p21.3a	Homo sapiens chromosome 8 open reading frame 58 (C8orf58), mRNA.				FLJ34715	FLJ34715
Homo sapiens	RefSeq	XR_001058.1	ILMN_10584	HYMAI	NR_002768.1	NR_002768.1		57061	84872052	NR_002768.1	HYMAI		ILMN_1686530	0004390358	A	4321	GGCAAACTATGGCCTGTGGGCCAATTCCAACCCACTGCATGTTTCTGTTT	6	-	144367190-144367239	6q24.2b	Homo sapiens hydatidiform mole associated and imprinted (non-protein coding) (HYMAI), non-coding RNA.					
Homo sapiens	RefSeq	XM_942473.1	ILMN_166100	LOC400963	XR_017634.1	XR_017634.1		400963	113412913	XR_017634.1	LOC400963		ILMN_1688749	0000770554	A	712	CGGGGCTGCACTGCCACCCTGGGCAACTTCGCCAAGGCCACCTTTGATGC	2	+	84997097-84997146	2p11.2g	PREDICTED: Homo sapiens hypothetical LOC400963 (LOC400963), mRNA.					
Homo sapiens	RefSeq	XM_945483.1	ILMN_38345	LOC650029	XM_945483.1	XM_945483.1		650029	89034892	XM_945483.1	LOC650029	XP_950576.1	ILMN_1760991	0003290706	I	565	ATGGCATCATCTTAATCTTGAAGCGTATTTCTGACATTCCTGAACCGTTC					PREDICTED: Homo sapiens similar to RNA-binding protein 4 (RNA-binding motif protein 4) (Lark homolog) (Hlark) (RNA-binding motif protein 4a), transcript variant 2 (LOC650029), mRNA.					
Homo sapiens	RefSeq	NM_006951.3	ILMN_181009	TAF5	NM_006951.3	NM_006951.3		6877	50363367	NM_006951.3	TAF5	NP_008882.2	ILMN_1684802	0002900193	S	2933	GTAGGGTTCCTTTCTTAGATCTAGAGGAAGTACAGCCACCCACTGACATC	10	+	105137350-105137399	10q24.33a	Homo sapiens TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa (TAF5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15637059] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [pmid 9045704] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 15637059] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 9045704] [evidence IDA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 10373431] [evidence IC ]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9045704] [evidence TAS]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [pmid 10373431] [evidence IDA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [pmid 17227857] [evidence IDA]	TAFII100; TAF2D	TAFII100; TAF2D
Homo sapiens	RefSeq	XM_927733.1	ILMN_34794	LOC653497	XM_927733.1	XM_927733.1		653497	89041215	XM_927733.1	LOC653497	XP_932826.1	ILMN_1791283	0003130176	S	1641	CCTGGGGGTGATGGGTTGGGGATGAGGGTGATGATGTTCCCACAGATGCA	17	-	15311052-15311101		PREDICTED: Homo sapiens similar to CMT1A duplicated region transcript 4 (LOC653497), mRNA.					
Homo sapiens	RefSeq	NM_007366.3	ILMN_22699	PLA2R1	NM_001007267.1	NM_001007267.1		22925	55953105	NM_001007267.1	PLA2R1	NP_001007268.1	ILMN_1683016	0006380494	A	3853	GGACGCTGGCATAGCACAGCCTGCGAGTCATTTCTGCAAGGTGCCATTTG	2	-	160806132-160806181	2q24.2a-q24.2b	Homo sapiens phospholipase A2 receptor 1, 180kDa (PLA2R1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7721806] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7721806] [evidence TAS]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7721806] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLEC13C; PLA2R; PLA2IR; PLA2G1R; PLA2-R	CLEC13C; PLA2R; PLA2IR; PLA2G1R; PLA2-R
Homo sapiens	RefSeq	NM_001007267.1	ILMN_22699	PLA2R1	NM_001007267.1	NM_001007267.1		22925	55953105	NM_001007267.1	PLA2R1	NP_001007268.1	ILMN_1704424	0000050739	I	4877	ATGGACTCTCCTACCGCCCCTACCCCCTTGGTACATGGCTGGCTTGGTAT	2	-	160802559-160802608	2q24.2a-q24.2b	Homo sapiens phospholipase A2 receptor 1, 180kDa (PLA2R1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7721806] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7721806] [evidence TAS]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7721806] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLEC13C; PLA2R; PLA2IR; PLA2G1R; PLA2-R	CLEC13C; PLA2R; PLA2IR; PLA2G1R; PLA2-R
Homo sapiens	RefSeq	NM_183049.2	ILMN_752	TMSL3	NM_183049.2	NM_183049.2		7117	72255572	NM_183049.2	TMSL3	NP_898870.1	ILMN_3240316	0003890025	S	397	TCTGTCTGGCTGGCAGGGAAGGAAAGAACTTGCATGTTGGTGAAGGAAGA	4	-	91978846-91978895	4q22.1e	Homo sapiens thymosin-like 3 (TMSL3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers [goid 42989] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Homo sapiens	RefSeq	NR_002822.1	ILMN_16346	MGC72080	NR_002822.1	NR_002822.1		389538	84872104	NR_002822.1	MGC72080		ILMN_2152502	0001660703	S	299	GCAGTGCTACAGCATGTACAAGAAGTCTCAGGGGATCCAGAACTGCAGCC	7	-	97434195-97434225:97436253-97436271	7q21.3d	Homo sapiens MGC72080 pseudogene (MGC72080) on chromosome 7.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	XM_935906.1	ILMN_42751	LOC641896	XM_935906.1	XM_935906.1		641896	89026750	XM_935906.1	LOC641896	XP_940999.1	ILMN_1721312	0003460382	S	539	CACCATCATGGAGGACCTCTGGACCTCTCCACCACAACGAGGGAAGCTGT					PREDICTED: Homo sapiens hypothetical protein LOC641896 (LOC641896), mRNA.					
Homo sapiens	RefSeq	NM_172230.2	ILMN_172402	SYVN1	NM_172230.2	NM_172230.2		84447	51317346	NM_172230.2	SYVN1	NP_757385.1	ILMN_2339691	0006280278	A	2383	GCTCGCTGGCCCACCCCTAAGACTGGTACCCATTTCCTTTTCTTACCCTG	11	-	64895369-64895418	11q13.1c	Homo sapiens synovial apoptosis inhibitor 1, synoviolin (SYVN1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12459480] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [pmid 12459480] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [pmid 12459480] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1810; MGC40372; HRD1	KIAA1810; MGC40372; HRD1
Homo sapiens	Unigene	Hs.193406	ILMN_81208	HS.193406	Hs.193406		Hs.193406		21750579	AK092074			ILMN_1890614	0004730711	S	2538	CAGCAGAAGCTCAGCAGATACTGGACAACCCATCCCCTTAGTAGAGGCAC	1	-	112066994-112067043		Homo sapiens cDNA FLJ34755 fis, clone NHNPC1000034					
Homo sapiens	RefSeq	NM_003577.2	ILMN_14411	UTF1	NM_003577.2	NM_003577.2		8433	71043875	NM_003577.2	UTF1	NP_003568.2	ILMN_1768793	0003180341	S	917	TGACCTTGAACCAGCACGTGGAGCAGCTGCGCGGCGCCTTCGACCAGACA	10	+	134894812-134894861	10q26.3f	Homo sapiens undifferentiated embryonic cell transcription factor 1 (UTF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18281244] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9748258] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 18281244] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 9748258] [evidence IDA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9748258] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9748258] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9748258] [evidence IPI]		
Homo sapiens	Unigene	Hs.154336	ILMN_79178	HS.154336	Hs.154336		Hs.154336		3387972	AF070595			ILMN_1855746	0007040731	S	1605	TCCCTCTTTTATGTGTGCTTGGCTCAGTTGCCTGTTACACAGCCTCTGCC	9	+	79225987-79226036		Homo sapiens clone 24583 mRNA sequence					
Homo sapiens	RefSeq	NM_001480.2	ILMN_165234	GALR1	NM_001480.2	NM_001480.2		2587	6031165	NM_001480.2	GALR1	NP_001471.1	ILMN_2151012	0001770441	S	2822	ATCATGGGACTGAATATACCTGGGGTATCCTATCTTGTACAAATGCATGC	18	+	73110846-73110895	18q23b	Homo sapiens galanin receptor 1 (GALR1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7524088] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7524088] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 7524088] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 7524088] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 8670213] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with galanin to initiate a change in cell activity [goid 4966] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with galanin to initiate a change in cell activity [goid 4966] [pmid 7524088] [evidence TAS]	GALNR1; GALNR	GALNR1; GALNR
Homo sapiens	RefSeq	NM_001480.2	ILMN_165234	GALR1	NM_001480.2	NM_001480.2		2587	6031165	NM_001480.2	GALR1	NP_001471.1	ILMN_1763309	0004180424	S	2366	GGTGGCATTTGCTTCCAATTGTAGCTAGCGCACAGAGCTTTGGAAGCCTG	18	+	73110390-73110439	18q23b	Homo sapiens galanin receptor 1 (GALR1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7524088] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7524088] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase activity [goid 7194] [pmid 7524088] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 7524088] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 8670213] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with galanin to initiate a change in cell activity [goid 4966] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with galanin to initiate a change in cell activity [goid 4966] [pmid 7524088] [evidence TAS]	GALNR1; GALNR	GALNR1; GALNR
Homo sapiens	RefSeq	NM_004992.2	ILMN_19006	MECP2	NM_004992.2	NM_004992.2		4204	7710148	NM_004992.2	MECP2	NP_004983.1	ILMN_1702715	0005130021	S	9507	CCCCTTCCCATTCCATGGCGAAAACATCTCCTTAGAAAAGCCATTACCCT	X	-	152941083-152941132	Xq28g	Homo sapiens methyl CpG binding protein 2 (Rett syndrome) (MECP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A compact and highly condensed form of chromatin [goid 792] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10773092] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9620804] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Locomotory behavior in a fully developed and mature organism [goid 8344] [evidence IEA]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9620804] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10773092] [evidence TAS]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15696166] [evidence IPI]; Interacting selectively with a methylated cytosine/guanine dinucleotide [goid 8327] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme [goid 35197] [evidence IEA]	AUTSX3; RTT; DKFZp686A24160; PPMX; RTS; MRX79; MRX16	AUTSX3; RTT; DKFZp686A24160; PPMX; RTS; MRX79; MRX16
Homo sapiens	RefSeq	NM_005167.5	ILMN_14635	PPM1J	NM_005167.5	NM_005167.5		333926	65506327	NM_005167.5	PPM1J	NP_005158.5	ILMN_1799150	0007200170	S	1464	TCTCCCCAACAACAAGCTGGGTTCCGGGGATGACATCTCTGTCTTCGTCA	1	-	113252816-113252865	1p13.2c	Homo sapiens protein phosphatase 1J (PP2C domain containing) (PPM1J), mRNA.		The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC19531; MGC90149; PPP2CZ; DKFZp434P1514; PP2Czeta; FLJ35951; PP2CZ; RP11-426L16.5	MGC19531; MGC90149; PPP2CZ; DKFZp434P1514; PP2Czeta; FLJ35951; PP2CZ; RP11-426L16.5
Homo sapiens	RefSeq	NM_020066.3	ILMN_18367	FMN2	NM_020066.3	NM_020066.3		56776	74136553	NM_020066.3	FMN2	NP_064450.2	ILMN_1764795	0004210681	S	5961	CCTTTCTACTGACAACCAGTCCTCCACATCACAGCATTTAGACATATGGG	1	+	238704440-238704489	1q43d	Homo sapiens formin 2 (FMN2), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]	Progression through metaphase of meiosis I; analogous to mitotic metaphase [goid 7132] [evidence ISS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; The cell cycle process whereby the directed movement of chromosomes from the center of the spindle towards the spindle poles takes place, mediated by the shortening of microtubules attached to the chromosomes. This occurs during meiosis [goid 16344] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The cell cycle process whereby two small cells are generated, as byproducts destined to degenerate, as a result of the first and second meiotic divisions of a primary oocyte during its development to a mature ovum. One polar body is formed in the first division of meiosis and the other in the second division; at each division, the cytoplasm divides unequally, so that the polar body is of much smaller size than the developing oocyte. At the second division in which a polar body is formed, the polar body and the developing oocyte each contain a haploid set of chromosomes [goid 40038] [evidence ISS]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence ISS]; The cell cycle process whereby the directed movement of the meiotic spindle to a specific location in the cell occurs [goid 51295] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Homo sapiens	RefSeq	NM_031306.1	ILMN_20156	DDX59	NM_031306.2	NM_031306.2		83479	142380342	NM_031306.2	DDX59	NP_112596.1	ILMN_1686485	0004760280	I	2545	CTCTTGGTCTAACATGTATTAGAAAGCAGAAGGAGCCCAGGCACAGGGGC	1	-	198859952-198860001	1q32.1b	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNHIT5; DKFZP564B1023; RP11-92G12.2	ZNHIT5; DKFZP564B1023; RP11-92G12.2
Homo sapiens	RefSeq	NM_005865.2	ILMN_10360	PRSS16	NM_005865.2	NM_005865.2		10279	21396490	NM_005865.2	PRSS16	NP_005856.1	ILMN_1692020	0000430768	S	2153	CTCTCTTGCTCTGCCATGGCTATTTCCACTGCTCTATTTCTGACTCTCAT	6	+	27331672-27331721	6p22.1c	Homo sapiens protease, serine, 16 (thymus) (PRSS16), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 10527559] [evidence ND ]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 10527559] [evidence NAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	FLJ36271; FLJ44172; TSSP; FLJ40714	FLJ44172; FLJ36271; TSSP; FLJ40714
Homo sapiens	RefSeq	NM_175728.1	ILMN_1894	IL5RA	NM_175728.1	NM_175728.1		3568	28559030	NM_175728.1	IL5RA	NP_783855.1	ILMN_2327812	0002450544	A	1143	CCCAGGACTTTTATCCTCAGCAAAGGGCGTGACTGGCTTGCGGTGCTTGT	3	-	3114618-3114667	3p26.3a	Homo sapiens interleukin 5 receptor, alpha (IL5RA), transcript variant 6, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 1495999] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1495999] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1732409] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 1732409] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4896] [evidence IEA]; Combining with interleukin-5 to initiate a change in cell activity [goid 4914] [pmid 1495999] [evidence TAS]	HSIL5R3; CDw125; CD125; IL5R; MGC26560	HSIL5R3; CDw125; CD125; IL5R; MGC26560
Homo sapiens	RefSeq	XM_001726067.1	ILMN_334700	LOC100132815	XM_001726067.1	XM_001726067.1		100132815	169214228	XM_001726067.1	LOC100132815	XP_001726119.1	ILMN_3275267	0007570438	M	914	GGCCTAGCATCTGAGTTATTTGTTGTTTCCTGGGTCCAGCTCACAGTGCC				19p12c	PREDICTED: Homo sapiens hypothetical protein LOC100132815 (LOC100132815), mRNA.					
Homo sapiens	RefSeq	NM_014930.1	ILMN_12377	ZNF510	NM_014930.1	NM_014930.1		22869	7662423	NM_014930.1	ZNF510	NP_055745.1	ILMN_2146968	0006270603	S	4720	TGAAGCGGTCACTCCTCTCAGTGGAAAGAGCACGAGGATGTTCTCAGCTC	9	-	99518531-99518580	9q22.33a	Homo sapiens zinc finger protein 510 (ZNF510), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC33740; KIAA0972	MGC33740; KIAA0972
Homo sapiens	RefSeq	Hs.534828	ILMN_175020	LOC728004	XM_001126331.1	XM_001126331.1		728004	113429140	XM_001126331.1	LOC728004	XP_001126331.1	ILMN_1855478	0003190605	S	2026	AGAAACAGGACTCAGGGCCCCATCTCAGAGGGCAGGAACAGAGCTGGCAT	21	-	45241679-45241728	21q22.3e	PREDICTED: Homo sapiens hypothetical protein LOC728004 (LOC728004), mRNA.					
Homo sapiens	RefSeq	NM_024888.1	ILMN_27968	LPPR3	NM_024888.1	NM_024888.1		79948	13376338	NM_024888.1	LPPR3	NP_079164.1	ILMN_1722290	0001580195	I	1735	AGTGGCCAACCCTCCGCGGCTGCTGCAGGTCATCGCCATGTCCAAGGCTC	19	-	813090-813139	19p13.3i	Homo sapiens lipid phosphate phosphatase-related protein type 3 (LPPR3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the reaction: a 3-sn-phosphatidate + H2O = a 1,2-diacyl-sn-glycerol + phosphate [goid 8195] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LPPR3; PRG-2	LPPR3; PRG-2
Homo sapiens	RefSeq	XR_038600.1	ILMN_335584	LOC728003	XR_038600.1	XR_038600.1		728003	169209113	XR_038600.1	LOC728003		ILMN_3250642	0003420273	M	2724	CTTCAACTTGACGTGATGTTTCAGTGATCTTTACTTCAGCTCTAAGTCAG				15q26.1a	PREDICTED: Homo sapiens misc_RNA (LOC728003), miscRNA.					
Homo sapiens	RefSeq	NM_175873.3	ILMN_165069	ANKRD43	NM_175873.4	NM_175873.4		134548	95147558	NM_175873.4	ANKRD43	NP_787069.3	ILMN_1779882	0002450274	S	2743	GTGGTTGTCTCCATCATGAAATAGAAACGTGTTTGGCACTTGTGGGTGGC	5	+	132151775-132151824	5q31.1c	Homo sapiens ankyrin repeat domain 43 (ANKRD43), mRNA.					
Homo sapiens	RefSeq	NM_001070.3	ILMN_176354	TUBG1	NM_001070.3	NM_001070.3		7283	34222287	NM_001070.3	TUBG1	NP_001061.2	ILMN_2367743	0005860411	A	1330	CATCCAGGGAGATTGTGCAGCAGCTCATCGATGAGTACCATGCGGCCACA	17	+	38020497-38020546	17q21.31a	Homo sapiens tubulin, gamma 1 (TUBG1), mRNA.	A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence ISS]; A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [pmid 9566969] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9566969] [evidence IDA]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [pmid 1904010] [evidence TAS]; Any of the spindle microtubules that come from each pole and overlap at the spindle midzone. This interdigitating structure consisting of antiparallel microtubules is responsible for pushing the poles of the spindle apart [goid 5827] [pmid 9566969] [evidence IDA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [pmid 1904010] [evidence TAS]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 1904010] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9566969] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17286961] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	TUBG	TUBG
Homo sapiens	RefSeq	XM_938498.1	ILMN_176354	TUBG1	NM_001070.3	NM_001070.3		7283	34222287	NM_001070.3	TUBG1	NP_001061.2	ILMN_1728024	0005390189	S	942	ATGAGGCGGCTGCTGCAGCCCAAGAACGTGATGGTGTCCACAGGCCGAGA	17	+	38019840-38019889	17q21.31a	Homo sapiens tubulin, gamma 1 (TUBG1), mRNA.	A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence ISS]; A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [pmid 9566969] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9566969] [evidence IDA]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [pmid 1904010] [evidence TAS]; Any of the spindle microtubules that come from each pole and overlap at the spindle midzone. This interdigitating structure consisting of antiparallel microtubules is responsible for pushing the poles of the spindle apart [goid 5827] [pmid 9566969] [evidence IDA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [pmid 1904010] [evidence TAS]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 1904010] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9566969] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17286961] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	TUBG	
Homo sapiens	RefSeq	NM_001070.3	ILMN_176354	TUBG1	NM_001070.3	NM_001070.3		7283	34222287	NM_001070.3	TUBG1	NP_001061.2	ILMN_1695731	0005670180	I	1471	CTGACTGACCACCCCCTCAGAGCACAGATCAGGGACCTCACGCATCTCTT	17	+	38020638-38020687	17q21.31a	Homo sapiens tubulin, gamma 1 (TUBG1), mRNA.	A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence ISS]; A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [pmid 9566969] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9566969] [evidence IDA]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [pmid 1904010] [evidence TAS]; Any of the spindle microtubules that come from each pole and overlap at the spindle midzone. This interdigitating structure consisting of antiparallel microtubules is responsible for pushing the poles of the spindle apart [goid 5827] [pmid 9566969] [evidence IDA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [pmid 1904010] [evidence TAS]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 1904010] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9566969] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17286961] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	TUBG	TUBG; TUBGCP1
Homo sapiens	RefSeq	XM_944510.1	ILMN_176354	TUBG1	NM_001070.3	NM_001070.3		7283	34222287	NM_001070.3	TUBG1	NP_001061.2	ILMN_1698646	0001230161	A	388	CCCAGGGAGAAAAGATCCATGAGGACATTTTTGACATCATAGACCGGGAG	17	+	38016130-38016134:38017619-38017663	17q21.31a	Homo sapiens tubulin, gamma 1 (TUBG1), mRNA.	A network of small fibers that surrounds the centrioles in cells; contains the microtubule nucleating activity of the centrosome [goid 242] [evidence IEA]; A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence ISS]; A multiprotein complex composed of gamma-tubulin and other non-tubulin proteins. Gamma-tubulin complexes are localized to microtubule organizing centers, and play an important role in the nucleation of microtubules. The number and complexity of non-tubulin proteins associated with these complexes varies between species [goid 930] [pmid 9566969] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9566969] [evidence IDA]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [pmid 1904010] [evidence TAS]; Any of the spindle microtubules that come from each pole and overlap at the spindle midzone. This interdigitating structure consisting of antiparallel microtubules is responsible for pushing the poles of the spindle apart [goid 5827] [pmid 9566969] [evidence IDA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the microtubule spindle during a meiotic cell cycle [goid 212] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [pmid 1904010] [evidence TAS]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 1904010] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9566969] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17286961] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	TUBG	
Homo sapiens	RefSeq	XM_001714028.1	ILMN_346618	PRAMEF11	XM_001714028.1	XM_001714028.1		440560	169162467	XM_001714028.1	PRAMEF11	XP_001714080.1	ILMN_3303518	0000290482	M	540	ACGGCAGCCCTTGACTGTGTTTGTAGAACTTTGGCTCAAGAACAGGACTC				1p36.21d	PREDICTED: Homo sapiens PRAME family member 11 (PRAMEF11), mRNA.					
Homo sapiens	RefSeq	NM_002610.3	ILMN_18922	PDK1	NM_002610.3	NM_002610.3		5163	37595546	NM_002610.3	PDK1	NP_002601.1	ILMN_1670256	0002370630	S	4352	AGGGGGCTTGCACTAAATTTCACTATCTTCAGTAGAGAGGAACTGTTTGG	2	+	173171884-173171933	2q31.1d-q31.1e	Homo sapiens pyruvate dehydrogenase kinase, isozyme 1 (PDK1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7499431] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [pmid 7499431] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 10748151] [evidence TAS]; The posttranslational phosphorylation of peptidyl-histidine to form peptidyl-1'-phospho-L-histidine (otherwise known as tau-phosphohistidine, tele-phosphohistidine) or peptidyl-3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine) [goid 18106] [evidence IEA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate dehydrogenase (acetyl-transferring) = ADP + pyruvate dehydrogenase (acetyl-transferring) phosphate [goid 4740] [pmid 7499431] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_024700.2	ILMN_179658	SNIP1	NM_024700.2	NM_024700.2		79753	21314719	NM_024700.2	SNIP1	NP_078976.2	ILMN_1651278	0002690270	S	2230	CCCAAGGTTGGAAAGCAGGGGAATTTCCCAGTGTCCTAGTTTTCCACCAG	1	-	38002333-38002382	1p34.3c	Homo sapiens Smad nuclear interacting protein 1 (SNIP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17157259] [evidence IPI]	RP3-423B22.3; dJ423B22.2; FLJ12553	RP3-423B22.3; dJ423B22.2; FLJ12553
Homo sapiens	RefSeq	XM_930141.1	ILMN_162540	LOC647123	XM_001129691.1	XM_001129691.1		647123	113419826	XM_001129691.1	LOC647123	XP_001129691.1	ILMN_1725947	0000160451	S	696	GGAGAGGCAAATCCCTGTTTATTTTGGTGGTGATTACTGCCCTTGCTGGG				7q34a	PREDICTED: Homo sapiens similar to Rieske iron-sulfur protein (LOC647123), mRNA.					
Homo sapiens	RefSeq	XM_930379.1	ILMN_35024	LOC647309	XM_930379.1	XM_930379.1		647309	88966041	XM_930379.1	LOC647309	XP_935472.1	ILMN_1788991	0006620167	S	258	CCCACGGCCGGTGGCCAGATCGAACACCATTCTGCCTTGCCAAGACCAGT	3	-	192061313-192061341:192063367-192063387	3q28d	PREDICTED: Homo sapiens hypothetical LOC647309 (LOC647309), mRNA.					
Homo sapiens	RefSeq	XM_001130018.1	ILMN_162465	LOC728800	XM_001130018.1	XM_001130018.1		728800	113425823	XM_001130018.1	LOC728800	XP_001130018.1	ILMN_3304195	0001260328	M	965	GCTGAGGTGTCTCACTACTGCCCAGACATGTGAATTCATGTGAGAGCTGG				15q26.2c	PREDICTED: Homo sapiens hypothetical LOC728800 (LOC728800), mRNA.					
Homo sapiens	RefSeq	NR_015362.1	ILMN_334328	TSG1	NR_015362.1	NR_015362.1		643432	168693608	NR_015362.1	TSG1		ILMN_3246534	0002760056	S	4553	CAGGAGCTGACTTGCTAGGATCACAGAACCAACAACAAGAGTGCGTCTGC	6	+	94485954-94486003		Homo sapiens tumor suppressor TSG1 (TSG1), non-coding RNA.					
Homo sapiens	RefSeq	XM_938416.1	ILMN_39121	LOC649341	XM_938416.1	XM_938416.1		649341	89040869	XM_938416.1	LOC649341	XP_943509.1	ILMN_1778801	0003710047	S	34	CGAGTGGAATCATCGAATGGACTCGAAAGTAATCATCGGAGAATGGAATC					PREDICTED: Homo sapiens hypothetical protein LOC649341 (LOC649341), mRNA.					
Homo sapiens	RefSeq	NM_002708.3	ILMN_29100	PPP1CA	NM_001008709.1	NM_001008709.1		5499	56790944	NM_001008709.1	PPP1CA	NP_001008709.1	ILMN_1695827	0003990368	A	851	TGGCCAAGTTCCTCCACAAGCACGACTTGGACCTCATCTGCCGAGCACAC	11	-	67166413-67166462	11q13.1f	Homo sapiens protein phosphatase 1, catalytic subunit, alpha isoform (PPP1CA), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 8392016] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8392016] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17511879] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PP-1A; MGC15877; MGC1674; PPP1A	PP-1A; MGC15877; MGC1674; PPP1A
Homo sapiens	RefSeq	NM_001375.2	ILMN_27899	DNASE2	NM_001375.2	NM_001375.2		1777	58331228	NM_001375.2	DNASE2	NP_001366.1	ILMN_1796245	0006200315	S	1880	CCCCTTCCTAGCTGTATGACCTTGATTGTGTGCCTTAACCGCTCTGTGAC	19	-	12986103-12986152	19p13.13c	Homo sapiens deoxyribonuclease II, lysosomal (DNASE2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 9714827] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9714827] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products [goid 4531] [pmid 9714827] [evidence TAS]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DNASE2A; DNL; DNL2	DNL; DNASE2A; DNL2
Homo sapiens	RefSeq	NM_012119.3	ILMN_39653	CCRK	NM_012119.3	NM_012119.3		23552	89903016	NM_012119.3	CCRK	NP_036251.2	ILMN_2357730	0001820739	A	2002	CCCTCTGCACATGAGGCTGGTTTACCAACATCTACTCCCTCAGGATGAGC	9	-	90581609-90581658	9q22.1a	Homo sapiens cell cycle related kinase (CCRK), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p42; CDCH	p42; CDCH
Homo sapiens	RefSeq	XM_941221.1	ILMN_43884	LOC390507	XM_941221.1	XM_941221.1		390507	89037879	XM_941221.1	LOC390507	XP_946314.1	ILMN_1691366	0005690088	S	580	AGGGAGCGGCTCTGCAGCCTCAAGTCTTTGCTCAAATCCCAGCTTCCAGA					PREDICTED: Homo sapiens similar to proline-rich glycoprotein (sgp158) (LOC390507), mRNA.					
Homo sapiens	RefSeq	NM_005282.1	ILMN_10873	GPR4	NM_005282.1	NM_005282.1		2828	4885334	NM_005282.1	GPR4	NP_005273.1	ILMN_2074477	0006580634	S	2490	CTGCCTGGAGGAGTGATGCCAGAAGGTTTGGGAAGAAGGTGTGGGACAAG	19	-	50785018-50785067	19q13.32a	Homo sapiens G protein-coupled receptor 4 (GPR4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8595909] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 7498459] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	XM_944710.1	ILMN_32676	LOC651483	XM_944710.1	XM_944710.1		651483	89057488	XM_944710.1	LOC651483	XP_949803.1	ILMN_1738598	0000160093	S	1	ATGGCGGCGGTGGCGGCGCTGAAAAGGCGACCGCCTGTCTCTGGCCCGGC					PREDICTED: Homo sapiens hypothetical LOC651483 (LOC651483), mRNA.					
Homo sapiens	RefSeq	XM_001713846.1	ILMN_339058	LOC100130623	XM_001713846.1	XM_001713846.1		100130623	169214676	XM_001713846.1	LOC100130623	XP_001713898.1	ILMN_3181296	0007150392	A	688	GACCCTCCTTGGGGGGAAAAATACCAGTACCCAGACACCTTTGCACCCTG	20	-	28135635-28135684	20q11.1c	PREDICTED: Homo sapiens hypothetical protein LOC100130623 (LOC100130623), mRNA.					
Homo sapiens	RefSeq	XM_942571.1	ILMN_37504	LOC652864	XM_942571.1	XM_942571.1		652864	89065083	XM_942571.1	LOC652864	XP_947664.1	ILMN_1688818	0000770437	S	130	TGGGGCAGATTTGAGCTGGCCTTCTTTACGATTGGAGGGTGTTGCATGAC					PREDICTED: Homo sapiens similar to Mitochondrial import inner membrane translocase subunit Tim23 (LOC652864), mRNA.					
Homo sapiens	Unigene	Hs.562350	ILMN_115485	HS.562350	Hs.562350		Hs.562350		8161730	AW971884			ILMN_1916497	0004010326	S	45	GGCTCATATTTCCAGTACTATGTTGAGTAGGATGGTGAGAGAGGGCACTC	11	+	71247832-71247881		EST383973 MAGE resequences, MAGL Homo sapiens cDNA, mRNA sequence					
Homo sapiens	Unigene	Hs.368071	ILMN_87701	HS.368071	Hs.368071		Hs.368071		8159898	AW970053			ILMN_1849146	0000870079	S	290	GCAGCTACTCCAGCCACAGTTTTCTTTCTCTGTAACACTCAATGATTCCT	7	-	140350510-140350559		EST382133 MAGE resequences, MAGK Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_205863.2	ILMN_27807	PARD3B	NM_205863.2	NM_205863.2		117583	119120906	NM_205863.2	PARD3B	NP_995585.2	ILMN_2324909	0004260424	A	3146	AGTACGCATCCTTACCCAGGGGAGGACCCGCAGATCCTGTAGACTATCTG	2	+	205873651-205873700	2q33.2b-q33.3a	Homo sapiens par-3 partitioning defective 3 homolog B (C. elegans) (PARD3B), transcript variant a, mRNA.	A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PAR3LC; PAR3beta; Par3Lb; MGC16131; ALS2CR19; PAR3L; PAR3B	PAR3LC; PAR3beta; Par3Lb; MGC16131; ALS2CR19; PAR3L; PAR3B
Homo sapiens	RefSeq	NM_004476.1	ILMN_14792	FOLH1	NM_004476.1	NM_004476.1		2346	4758397	NM_004476.1	FOLH1	NP_004467.1	ILMN_1681651	0004830086	I	2268	GTTTCTGGAAAGAGCATTTATTGATCCATTAGGGTTACCAGACAGGCCTT	11	-	49178530-49178569:49179504-49179513	11p11.12d	Homo sapiens folate hydrolase (prostate-specific membrane antigen) 1 (FOLH1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8417812] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8417812] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9375657] [evidence NAS]	Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 9375657] [evidence NAS]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of a dipeptide [goid 16805] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FOLH; GCP2; FGCP; PSM; NAALAdase; mGCP; GCPII; PSMA; NAALAD1	FOLH; GCP2; FGCP; PSM; NAALAdase; mGCP; GCPII; PSMA; NAALAD1
Homo sapiens	RefSeq	NM_015216.2	ILMN_29747	HISPPD1	NM_015216.2	NM_015216.2		23262	41281582	NM_015216.2	HISPPD1	NP_056031.2	ILMN_1785520	0001300681	S	2939	AGGAAGACGGCTACAAATGATGAAGAGAGCCCCCTGAGTGTGTCTAGCCC	5	+	102508950-102508986:102509562-102509574	5q21.1d	Homo sapiens histidine acid phosphatase domain containing 1 (HISPPD1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]	The chemical reactions and pathways involving inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms [goid 6020] [evidence ISS]	Catalysis of the reaction: ATP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate = ADP + diphospho-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 827] [evidence ISS]; Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 5-diphospho-1D-myo-inositol (1,2,3,4,6)pentakisphosphate [goid 832] [evidence ISS]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + 5-diphospho-1D-myo-inositol pentakisphosphate = ADP + bis(diphospho)-1D-myo-inositol tetrakisphosphate (isomeric configuration unknown) [goid 33857] [evidence ISS]	PPIP5K2; KIAA0433; VIP2; FLJ21506	PPIP5K2; KIAA0433; VIP2; FLJ21506
Homo sapiens	RefSeq	NM_001001690.1	ILMN_5511	FLJ42133	NM_001001690.1	NM_001001690.1		400844	48717385	NM_001001690.1	FLJ42133	NP_001001690.1	ILMN_2167961	0006520563	S	1754	CCTCTGACCTGCTTCACAGGCGGGAAGAGTGTGCTCCAGAGTTGTTAAAG	20	+	35744692-35744741	20q11.23b	Homo sapiens hypothetical FLJ42133 (FLJ42133), mRNA.					
Homo sapiens	RefSeq	NM_002424.1	ILMN_800	MMP8	NM_002424.1	NM_002424.1		4317	4505220	NM_002424.1	MMP8	NP_002415.1	ILMN_1736026	0006280594	S	2013	GAAGTTCTAACCCCAGGTACCCATGAATGTGAGCTTACCAGGGTCTTTGC	11	-	102088702-102088751	11q22.2b	Homo sapiens matrix metallopeptidase 8 (neutrophil collagenase) (MMP8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2164002] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 2164002] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2164002] [evidence IDA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 16192646] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2164002] [evidence TAS]	PMNL-CL; HNC; CLG1	PMNL-CL; HNC; CLG1
Homo sapiens	RefSeq	NR_002158.1	ILMN_13267	OR2A20P	NR_002158.1	NR_002158.1		401428	49227780	NR_002158.1	OR2A20P		ILMN_2081269	0004880754	S	3	GGTGAAAAATCAGACAATGGTCACAGAGTTCCTCCTACTGGGATTTCTCC	7	-	143948644-143948693	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 20 pseudogene (OR2A20P), non-coding RNA.				OR2A20	OR2A20
Homo sapiens	RefSeq	NR_002158.1	ILMN_13267	OR2A20P	NR_002158.1	NR_002158.1		401428	49227780	NR_002158.1	OR2A20P		ILMN_1738976	0002350707	S	69	GATGCTCCTCTTTGGGCTCTTCTCCCTGTTCTATGTCTTCACCCTGCTGG	7	-	143948578-143948627	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 20 pseudogene (OR2A20P), non-coding RNA.				OR2A20	OR2A20
Homo sapiens	RefSeq	XM_001723199.1	ILMN_334517	LOC100129361	XM_001723199.1	XM_001723199.1		100129361	169204584	XM_001723199.1	LOC100129361	XP_001723251.1	ILMN_3252621	0000650086	M	2086	CAGCCAAACTCCATTTGGGCACATTCTCCTATAGCCTTTTCTACCTGAAG				12p13.2b	PREDICTED: Homo sapiens similar to mCG115122 (LOC100129361), mRNA.					
Homo sapiens	RefSeq	NM_020528.1	ILMN_9338	PCBP3	NM_020528.1	NM_020528.1		54039	10092616	NM_020528.1	PCBP3	NP_065389.1	ILMN_1687216	0003390747	S	1625	AACTGTTGCCTGAGACCCCTCCTCTCTCACACAGCCCTGCCATGCTGACT	21	+	46186432-46186481	21q22.3f	Homo sapiens poly(rC) binding protein 3 (PCBP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes [goid 16071] [pmid 7556077] [evidence NAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10936052] [evidence NAS]	ALPHA-CP3	ALPHA-CP3
Homo sapiens	RefSeq	NM_001017967.2	ILMN_174077	MARVELD3	NM_001017967.2	NM_001017967.2		91862	65301121	NM_001017967.2	MARVELD3	NP_001017967.2	ILMN_1710644	0002000270	I	2083	CTGGAGGCTTTTTCATTTCTGCATTCCCTGACAGTGCTCCATAGAGTAGG	16	+	70233218-70233267	16q22.3a	Homo sapiens MARVEL domain containing 3 (MARVELD3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ32280; MRVLDC3; MARVD3	FLJ32280; MRVLDC3; MARVD3
Homo sapiens	RefSeq	NM_182702.1	ILMN_18620	PRSS42	NM_182702.1	NM_182702.1		339906	33186881	NM_182702.1	PRSS42	NP_874361.1	ILMN_1757294	0004830431	S	833	CATGGGTCCAGGTAGGGATTGTGAGCTGGGGCATCGGCTGTGGTCGCTGA	3	-	46850589-46850589:46871894-46871942	3p21.31h	Homo sapiens protease, serine, 42 (PRSS42), mRNA.					
Homo sapiens	RefSeq	XR_017793.2	ILMN_182842	STELLAR	XR_017793.2	XR_017793.2		400206	169207567	XR_017793.2	STELLAR		ILMN_3251014	0002140612	M	146	AGTCTTTGCTTTCCGGGCTACCTTGTAGCAATTTGAGGCTCTGTCATCAG				14q13.3a	PREDICTED: Homo sapiens misc_RNA (STELLAR), miscRNA.					
Homo sapiens	Unigene	Hs.98458	ILMN_74502	HS.98458	Hs.98458		Hs.98458		27882496	BX118817			ILMN_1852179	0002650333	S	297	CTGCCCTGGTGTGATGCATGGCTTGCTGGAGGCATGGAGAAGTGGGAAAA	4	-	55405977-55406026		BX118817 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998L041862, mRNA sequence					
Homo sapiens	RefSeq	NM_020965.2	ILMN_10726	MAGI3	NM_020965.2	NM_020965.2		260425	29568112	NM_020965.2	MAGI3	NP_066016.1	ILMN_1663986	0000770451	A	3686	CATGGTTTGGCTCCTTCCGGTCTGTGCTCCTACGTGAAACCCGAGCAACA	1	+	114025479-114025481:114026357-114026403	1p13.2c-p13.2b	Homo sapiens membrane associated guanylate kinase, WW and PDZ domain containing 3 (MAGI3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC163281; MAGI-3; dJ730K3.2; RP4-730K3.1	MGC163281; MAGI-3; dJ730K3.2; RP4-730K3.1
Homo sapiens	RefSeq	NM_020965.2	ILMN_10726	MAGI3	NM_020965.2	NM_020965.2		260425	29568112	NM_020965.2	MAGI3	NP_066016.1	ILMN_1765451	0006840458	I	18	CTTTTCCTTTCTTCAGCCTAACCCGCGGTGGCCCTCGCGGAGTCCGGTCA	1	+	113734911-113734960	1p13.2c-p13.2b	Homo sapiens membrane associated guanylate kinase, WW and PDZ domain containing 3 (MAGI3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC163281; MAGI-3; dJ730K3.2; RP4-730K3.1	MGC163281; MAGI-3; dJ730K3.2; RP4-730K3.1
Homo sapiens	RefSeq	NM_152776.1	ILMN_31126	GK5	NM_001039547.1	NM_001039547.1		256356	88196791	NM_001039547.1	GK5	NP_001034636.1	ILMN_1673892	0006180543	S	1541	GGGTGCAGCTTCTCTAGCTGGCCTTGCTGTTGGGTTTTGGACTGACAAGG	3	-	143367284-143367302:143371857-143371887	3q23c-q23d	Homo sapiens glycerol kinase 5 (putative) (GK5), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + glycerol = ADP + glycerol 3-phosphate [goid 4370] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC40579; FLJ45739; FLJ33582	FLJ45739; FLJ33582
Homo sapiens	RefSeq	XM_001725950.1	ILMN_336018	LOC100132839	XM_001725950.1	XM_001725950.1		100132839	169201197	XM_001725950.1	LOC100132839	XP_001726002.1	ILMN_3200438	0005890148	A	3460	GTGTGCGATAAGGCCAGAACTTGGTCGTAGAGGTTCAGGGCAGAAGCCAG				10q25.3a	PREDICTED: Homo sapiens hypothetical LOC100132839 (LOC100132839), mRNA.					
Homo sapiens	RefSeq	XM_208930.3	ILMN_31335	LOC283953	XM_208930.4	XM_208930.4		283953	113425893	XM_208930.4	LOC283953	XP_208930.1	ILMN_1667418	0005290136	S	539	CCTAGTACCTGTGTGCTTATGTCCGTGTGTGTCCGTGTGGCCTGGAGGAG	16	-	8559556-8559605	16p13.2b	PREDICTED: Homo sapiens hypothetical LOC283953 (LOC283953), mRNA.					
Homo sapiens	RefSeq	NM_177525.1	ILMN_8727	MEST	NM_177525.1	NM_177525.1		4232	29294636	NM_177525.1	MEST	NP_803491.1	ILMN_1742307	0004290626	A	2163	CCAGAAACTTTAAGAACAAACTCTGAAAGACCTATGAGCAAATGGTGCTG	7	+	129933159-129933208	7q32.2b	Homo sapiens mesoderm specific transcript homolog (mouse) (MEST), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [pmid 9158153] [evidence TAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	PEG1; MGC111102; DKFZp686L18234; MGC8703	PEG1; MGC111102; DKFZp686L18234; MGC8703
Homo sapiens	RefSeq	XM_939363.1	ILMN_44279	LOC650276	XM_939363.1	XM_939363.1		650276	89036050	XM_939363.1	LOC650276	XP_944456.1	ILMN_1687738	0004150524	S	698	GTAGAAGGTGGAGATGCTGGCAACAGGGAGGACCAGGTCAACAGGCTTAT					PREDICTED: Homo sapiens similar to 60S ribosomal protein L7 (LOC650276), mRNA.					
Homo sapiens	RefSeq	XM_926445.1	ILMN_33679	LOC643070	XM_926445.1	XM_926445.1		643070	89047221	XM_926445.1	LOC643070	XP_931538.1	ILMN_1689837	0007040121	S	1	TTGCATAATGCACAACAGGAGATCTATGTGGCCAGAGTGGAGGAACCCTT	18	+	56458638-56458678:56460174-56460182		PREDICTED: Homo sapiens similar to glutamate decarboxylase 1 (LOC643070), mRNA.					
Homo sapiens	RefSeq	NM_207469.2	ILMN_364347	DEFB132	NM_207469.2	NM_207469.2		400830	197245446	NM_207469.2	DEFB132	NP_997352.1	ILMN_3249588	0003930025	S	1627	GACACGTACTGACTTCTATCTGAGAAGAACAAACCAAAACACTCAGGCCT	20	+	241243-241292	20p13f	Homo sapiens defensin, beta 132 (DEFB132), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]			
Homo sapiens	RefSeq	NM_138730.1	ILMN_24755	HMGN3	NM_138730.1	NM_138730.1		9324	23238230	NM_138730.1	HMGN3	NP_620058.1	ILMN_1731984	0003370014	A	353	GGTGCTAAAGGGAAGAAGGAGGAAAAGCAGGAAGCTGGAAAGGAAGGCAC	6	-	79968158-79968162:79968753-79968797	6q14.1c	Homo sapiens high mobility group nucleosomal binding domain 3 (HMGN3), transcript variant 2, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 7776974] [evidence NAS]	PNAS-24; TRIP7; PNAS-25; DKFZp686E20226	PNAS-24; TRIP7; PNAS-25; DKFZp686E20226
Homo sapiens	RefSeq	XM_371796.2	ILMN_173203	LOC648791	XR_018474.1	XR_018474.1		648791	113417913	XR_018474.1	LOC648791		ILMN_1800716	0000780075	S	791	GATGCCAAGAAAGAGCCAGGCGCCGAGTGCTTCCACTTCTCGCTGTGCCT				6p25.1c	PREDICTED: Homo sapiens hypothetical LOC648791 (LOC648791), mRNA.					
Homo sapiens	RefSeq	NM_004255.2	ILMN_22835	COX5A	NM_004255.2	NM_004255.2		9377	17017986	NM_004255.2	COX5A	NP_004246.1	ILMN_1704477	0004900670	S	448	AACTGGGCCTTGACAAAGTGTAAACCGCATGGATGGGCTTCCCCAAGGAT	15	-	72999818-72999836:73003042-73003050:73003051-73003072	15q24.1b	Homo sapiens cytochrome c oxidase subunit Va (COX5A), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [pmid 2853101] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 2853101] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	COX-VA; VA; COX	VA; COX-VA; COX
Homo sapiens	RefSeq	XR_039364.1	ILMN_352291	LOC100130367	XR_039364.1	XR_039364.1		100130367	169211857	XR_039364.1	LOC100130367		ILMN_3273065	0004060044	M	1160	TCATGAGTTCAAGACCCGCCTGGGCATCAATGGTGAAGCCTGGTCTCTAC				17q21.32a	PREDICTED: Homo sapiens misc_RNA (LOC100130367), miscRNA.					
Homo sapiens	RefSeq	NM_138938.1	ILMN_21882	REG3A	NM_138938.1	NM_138938.1		5068	21070994	NM_138938.1	REG3A	NP_620355.1	ILMN_1757504	0004120681	I	54	CCTGGGAGGGCTCGGGGATGGGAGAGTACACAGATTCACAACTCATTCAG	2	-	79386683-79386732	2p12e	Homo sapiens regenerating islet-derived 3 alpha (REG3A), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8997243] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1325291] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8997243] [evidence TAS]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [pmid 8997243] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8997243] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8997243] [evidence TAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 1325291] [evidence TAS]	PAP1; REG-III; INGAP; REG3; HIP; PAP-H; PBCGF; PAP	PAP1; REG-III; INGAP; REG3; HIP; PAP-H; PBCGF; PAP
Homo sapiens	RefSeq	NM_198841.1	ILMN_22445	C9ORF10OS	NM_198841.1	NM_198841.1		158293	38502322	NM_198841.1	C9orf10OS	NP_942138.1	ILMN_1750969	0001170446	S	2299	AGAACACCAAAGGAGACCATATGGGTGAAAGCAACCAGCACTGCCCTGGC	9	-	95249019-95249068	9q22.31b	Homo sapiens chromosome 9 open reading frame 10 opposite strand (C9orf10OS), mRNA.				FLJ31534	FLJ31534
Homo sapiens	RefSeq	NM_138447.1	ILMN_14716	ZNF689	NM_138447.1	NM_138447.1		115509	34147543	NM_138447.1	ZNF689	NP_612456.1	ILMN_1759008	0006270619	S	2592	CCACTACACCTTCTGGGGCTGGACTTGTTTCAGCAGCTTTGGTTGCACTG	16	-	30614766-30614815	16p11.2c	Homo sapiens zinc finger protein 689 (ZNF689), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ90415; DKFZp762C173; TIPUH1	FLJ90415; DKFZp762C173; TIPUH1
Homo sapiens	Unigene	Hs.546150	ILMN_109186	HS.546150	Hs.546150		Hs.546150		27834453	BX107107			ILMN_1872539	0001440576	S	250	ACTGGAGCCCCGTTGGTATGATGAGAAACTGTGGAGGCGGTGAAGCATTC					BX107107 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGp998M06173, mRNA sequence					
Homo sapiens	RefSeq	XR_038693.1	ILMN_350583	LOC286444	XR_038693.1	XR_038693.1		286444	169216212	XR_038693.1	LOC286444		ILMN_3293685	0000630128	M	3	CAAAGGGGCCCAGAGAAAACACCAAATGGCGGATGACGCCGGTGCAGCGA				Xp11.4b	PREDICTED: Homo sapiens misc_RNA (LOC286444), miscRNA.					
Homo sapiens	RefSeq	XR_038693.1	ILMN_350583	LOC286444	XR_038693.1	XR_038693.1		286444	169216212	XR_038693.1	LOC286444		ILMN_3217172	0004590576	A	516	TCCCCGTGCGCAGAGGCTACTGGAGGAACAAGATCGGCAAGCCCCACACC				Xp11.4b	PREDICTED: Homo sapiens misc_RNA (LOC286444), miscRNA.					
Homo sapiens	RefSeq	XM_942415.1	ILMN_38539	LOC652773	XM_942415.1	XM_942415.1		652773	89077406	XM_942415.1	LOC652773	XP_947508.1	ILMN_1687526	0002970100	S	44	AGTAAGCCTGCCAGACACGCTGTGGCGGCTGCCTGAAGCTAGTGAGTCGC					PREDICTED: Homo sapiens similar to Shwachman-Bodian-Diamond syndrome (predicted) (LOC652773), mRNA.					
Homo sapiens	RefSeq	NM_181578.1	ILMN_22356	RFC5	NM_181578.1	NM_181578.1		5985	31795539	NM_181578.1	RFC5	NP_853556.1	ILMN_1699709	0005080477	I	288	GCCTCCGAAGAACTGGGACTTTTAGAGGCGAGCTACCAAGCCCATCCTGT	12	+	116939977-116940026	12q24.23a	Homo sapiens replication factor C (activator 1) 5, 36.5kDa (RFC5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9822671] [evidence EXP]; A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase [goid 5663] [pmid 9488738] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 8999859] [evidence NAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 8999859] [evidence NAS]; Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes [goid 6297] [pmid 9111189] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their closing around the DNA duplex [goid 3689] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 8999859] [evidence NAS]	MGC1155; RFC36	MGC1155; RFC36
Homo sapiens	RefSeq	XR_015445.2	ILMN_171847	LOC728179	XR_015445.2	XR_015445.2		728179	169168531	XR_015445.2	LOC728179		ILMN_3286375	0003940040	M	727	GGTCACAAGTCTGTGGCTCATGTCACCAAGCTCGAAAAGGCAAAGGCTAG				6p24.3a	PREDICTED: Homo sapiens misc_RNA (LOC728179), miscRNA.					
Homo sapiens	RefSeq	XM_001726649.1	ILMN_346502	LOC100133502	XM_001726649.1	XM_001726649.1		100133502	169203644	XM_001726649.1	LOC100133502	XP_001726701.1	ILMN_3244816	0004640600	S	2465	CGTTGGGTTTGTCTCTTCTTCCTAGCATTTCAGTGGTTAGGCATGCACAC					PREDICTED: Homo sapiens hypothetical protein LOC100133502 (LOC100133502), mRNA.					
Homo sapiens	RefSeq	XM_927291.1	ILMN_35535	LOC644048	XM_927291.1	XM_927291.1		644048	89034324	XM_927291.1	LOC644048	XP_932384.1	ILMN_1681043	0006840554	S	35	ACAACAACGCGTTTGGCCCAGGAACTGCTAACAAACATACCGTGCAATGG	11	-	108322867-108322916		PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC644048), mRNA.					
Homo sapiens	RefSeq	NM_145893.1	ILMN_9675	A2BP1	NM_145893.1	NM_145893.1		54715	22538408	NM_145893.1	A2BP1	NP_665900.1	ILMN_1731507	0005390438	I	1312	AAATCAGTTCGTCTTCGTTGCAGCAGATGAAATTTCTTGTAACACCTCTG	16	+	7683319-7683368	16p13.3a-p13.2c	Homo sapiens ataxin 2-binding protein 1 (A2BP1), transcript variant 3, mRNA.				FOX1; HRNBP1	FOX1; HRNBP1
Homo sapiens	RefSeq	NM_004298.2	ILMN_9919	NUP155	NM_153485.1	NM_153485.1		9631	24430148	NM_153485.1	NUP155	NP_705618.1	ILMN_1768293	0006060685	A	4172	CTCTGCCTGGATGCTGTTTGTGGTTACCTTGTTGAGCTCCAGTCTATGAG	5	-	37342661-37342710	5p13.2b	Homo sapiens nucleoporin 155kDa (NUP155), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10191094] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [evidence IEA]	N155; KIAA0791	N155; KIAA0791
Homo sapiens	RefSeq	NM_153485.1	ILMN_9919	NUP155	NM_153485.1	NM_153485.1		9631	24430148	NM_153485.1	NUP155	NP_705618.1	ILMN_1761772	0005050452	I	216	AGTTGCAAGAGGACCGCATGTACCCGGACCTTTCCGAGCTGCTTATGGTG	5	-	37406689-37406738	5p13.2b	Homo sapiens nucleoporin 155kDa (NUP155), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10191094] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [evidence IEA]	N155; KIAA0791	N155; KIAA0791
Homo sapiens	RefSeq	XM_001717043.1	ILMN_348695	LOC100128485	XM_001717043.1	XM_001717043.1		100128485	169205951	XM_001717043.1	LOC100128485	XP_001717095.1	ILMN_3192419	0003450044	A	2	CTGTTATAGGAATTAACAGTCTTTATTGGGCTCAGACCAGGAGTCCGTGG	13	+	53907553-53907561:53912818-53912858	13q21.1b	PREDICTED: Homo sapiens similar to conserved hypothetical protein (LOC100128485), mRNA.					
Homo sapiens	RefSeq	XM_930152.1	ILMN_41752	MGC15705	XM_930152.1	XM_930152.1		84843	89058845	XM_930152.1	MGC15705	XP_935245.1	ILMN_1768164	0002190296	A	1149	GTTCACCTTTAGGAAGTGCTGATGGCACACCAGGGCCCAGCACACCGCAT	22	+	30056164-30056213	22q12.2c	PREDICTED: Homo sapiens hypothetical protein MGC15705 (MGC15705), mRNA.					
Homo sapiens	RefSeq	NM_003683.4	ILMN_181792	D21S2056E	NM_003683.4	NM_003683.4		8568	41352715	NM_003683.4	D21S2056E	NP_003674.1	ILMN_1792960	0004150386	S	2624	GGCCAGGGCCCCTGTTCTAGGGGTTAGGGTTCTTTCCCCAAAGGAACTTA	21	+	44049241-44049290	21q22.3c	Homo sapiens DNA segment on chromosome 21 (unique) 2056 expressed sequence (D21S2056E), mRNA.				NNP-1; NOP52	NNP-1; NOP52
Homo sapiens	RefSeq	NM_004200.2	ILMN_169771	SYT7	NM_004200.2	NM_004200.2		9066	38570145	NM_004200.2	SYT7	NP_004191.2	ILMN_2380938	0005050390	A	4240	CCCCAGGGGTGGGGATTGGTGGCCACTGTTTGTATGTTCTTGAGTGCAAG	11	-	61283027-61283076	11q12.2b	Homo sapiens synaptotagmin VII (SYT7), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The resealing of a cell plasma membrane after cellular wounding due to, for instance, mechanical stress [goid 1778] [evidence IEA]		IPCA-7; MGC150517; PCANAP7; SYT-VII	IPCA-7; MGC150517; PCANAP7; SYT-VII
Homo sapiens	RefSeq	NM_021123.1	ILMN_1409	GAGE7	NM_021123.2	NM_021123.2		2579	93352564	NM_021123.2	GAGE7	NP_066946.1	ILMN_1770467	0003400477	S	399	CAGTGTTAAAAGAAGGCACGTTGAAATGATGCAGGCTGCTCCTATTTTGG	X	+	49110785-49110793:49110794-49110834		Homo sapiens G antigen 7 (GAGE7), mRNA.				GAGE-7	GAGE-7
Homo sapiens	RefSeq	XM_001133227.1	ILMN_182497	FLJ35379	XM_001133227.1	XM_001133227.1		729420	113424088	XM_001133227.1	FLJ35379	XP_001133227.1	ILMN_3187458	0000830332	A	460	GGAGGATGTCCTCAGAGAGCTGGAAGATCACAGTCCTCATTGTCACAACC	13	+	75355241-75355290	13q22.2b	PREDICTED: Homo sapiens similar to Alu subfamily J sequence contamination warning entry (FLJ35379), mRNA.					
Homo sapiens	RefSeq	XM_372878.3	ILMN_39503	LOC391282	XM_372878.3	XM_372878.3		391282	89058193	XM_372878.3	LOC391282	XP_372878.3	ILMN_1653566	0002120070	S	1	ATGCACTTCCTGGGCTTTAGATGCATCTTTTTCCCAGCCTGGGAAGCTGT	21	+	39420866-39420915	21q22.2a	PREDICTED: Homo sapiens similar to 60S ribosomal protein L23a (LOC391282), mRNA.					
Homo sapiens	RefSeq	XM_937157.1	ILMN_39891	LOC644548	XM_937157.1	XM_937157.1		644548	88980367	XM_937157.1	LOC644548	XP_942250.1	ILMN_1695537	0000520725	S	237	GGTAAACACACCCAGACAATGGGCAGTGCAGGCTCAGAAACTGATGAAAA				4q13.1d	PREDICTED: Homo sapiens similar to LOC531907 protein (LOC644548), mRNA.					
Homo sapiens	RefSeq	NM_144584.1	ILMN_7678	C1ORF59	NM_144584.1	NM_144584.1		113802	21389358	NM_144584.1	C1orf59	NP_653185.1	ILMN_1682428	0001710242	S	1523	GACTCAATTCCTCTGAGCAGTGATGGTTCTGCAGTGGTGGCTGACCTGCG	1	-	108992741-108992790	1p13.3c	Homo sapiens chromosome 1 open reading frame 59 (C1orf59), mRNA.				MGC111091; RP11-256E16.2; FLJ30525	MGC111091; RP11-256E16.2; FLJ30525
Homo sapiens	RefSeq	XM_938560.1	ILMN_170608	LOC731170	XR_015402.1	XR_015402.1		731170	113417238	XR_015402.1	LOC731170		ILMN_1654430	0005490424	S	1046	AAAGATGGGAGCATTACCAGATTTCAAGAATTTAGGGCCATCTTTCACCT					PREDICTED: Homo sapiens similar to eukaryotic translation elongation factor 1 alpha 2 (LOC731170), mRNA.					
Homo sapiens	RefSeq	NM_001136534.1	ILMN_371021	TMEM233	NM_001136534.1	NM_001136534.1		387890	211904184	NM_001136534.1	TMEM233	NP_001130006.1	ILMN_3242676	0003830687	S	1339	TTTCCAAATAGGCCCCCTCCCTTGCTTGCATCCACGTTGGTCAACTTGAC	12	+	120079129-120079178	12q24.23c	Homo sapiens transmembrane protein 233 (TMEM233), mRNA.					
Homo sapiens	RefSeq	XM_934284.1	ILMN_44962	LOC653352	XM_934284.1	XM_934284.1		653352	89040100	XM_934284.1	LOC653352	XP_939377.1	ILMN_1755277	0006250259	I	111	GTTGGGCGTCGGGAGGTGTTGGCTCGGGCCTCTTCGCGTGGCCGGTGACG	16	-	28322487-28322536		PREDICTED: Homo sapiens similar to eukaryotic translation initiation factor 3, subunit 8, transcript variant 3 (LOC653352), mRNA.					
Homo sapiens	RefSeq	XM_001720423.1	ILMN_342204	LOC100133101	XM_001720423.1	XM_001720423.1		100133101	169172784	XM_001720423.1	LOC100133101	XP_001720475.1	ILMN_3241411	0002120739	S	15	CCTCTTCTTCACCATTTTCTTCTTTATGAGCCAAGTTCTACCAGCCAAGG	8	+	7218090-7218133:7222269-7222274	8p23.1f	PREDICTED: Homo sapiens similar to beta-defensin (LOC100133101), mRNA.					
Homo sapiens	RefSeq	NM_000987.2	ILMN_10538	RPL26	NM_000987.3	NM_000987.3		6154	78190467	NM_000987.3	RPL26	NP_000978.1	ILMN_1731546	0001230309	S	57	CTTCCCTTTTGCGGCCATCACCGAAGCGGGAGCGGCCAAAATGAAGTTTA	17	-	8285618-8285628:8285629-8285633:8286475-8286508	17p13.1c	Homo sapiens ribosomal protein L26 (RPL26), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site) [goid 15934] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 8479925] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8479925] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8479925] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_207397.1	ILMN_28225	CD164L2	NM_207397.2	NM_207397.2		388611	115583661	NM_207397.2	CD164L2	NP_997280.1	ILMN_1714118	0001740180	S	1315	CTGGGCCTGGAACCTGCAGCTGAGAAAATCCCTCAACCACCTCGTCTCCT	1	-	27705770-27705819	1p36.11a	Homo sapiens CD164 sialomucin-like 2 (CD164L2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			UNQ6122	UNQ6122
Homo sapiens	RefSeq	NM_152835.1	ILMN_1573	PDIK1L	NM_152835.2	NM_152835.2		149420	142383716	NM_152835.2	PDIK1L	NP_690048.1	ILMN_1806328	0005820427	S	3831	GGCAGCTGTGGCCAGTGAAAATATGGGGTTGTACAGTTAGTTCCTAGAAT	1	+	26324171-26324220	1p36.11b	Homo sapiens PDLIM1 interacting kinase 1 like (PDIK1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	RP11-96L14.4; CLIK1L	RP11-96L14.4; CLIK1L
Homo sapiens	RefSeq	NM_005863.2	ILMN_175509	NET1	NM_001047160.1	NM_001047160.1		10276	114145478	NM_001047160.1	NET1	NP_001040625.1	ILMN_1758311	0001430735	S	2999	GGGCGTGTAGTAAGTTGTAGAAGGCTCGAGGGGACGTGGACTTATTTGCC	10	+	5489634-5489683	10p15.1c	Homo sapiens neuroepithelial cell transforming 1 (NET1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 8649828] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 8649828] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	ARHGEF8; NET1A	ARHGEF8; NET1A
Homo sapiens	RefSeq	NM_130440.1	ILMN_18896	PTPRF	NM_130440.1	NM_130440.1		5792	18860895	NM_130440.1	PTPRF	NP_569707.1	ILMN_1798081	0005870553	A	7345	ATCAGTCCTTATTATCCCAGCTTGCTGAGGGGCAGGGAGAGCGCCTCTTC	1	+	43861599-43861648	1p34.2a	Homo sapiens protein tyrosine phosphatase, receptor type, F (PTPRF), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2972792] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7665159] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine phosphatase binding to its physiological ligand [goid 7185] [pmid 8995282] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5001] [pmid 8995282] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LAR	LAR
Homo sapiens	RefSeq	NM_001017930.1	ILMN_29378	DCAF8L1	NM_001017930.1	NM_001017930.1		139425	62988358	NM_001017930.1	DCAF8L1	NP_001017930.1	ILMN_1796887	0001030497	S	2901	GGGAACTCCCACAGGATTACATTCCAGGAAGTCCTCCTGGCGCAAGCATC	X	-	27996616-27996665	Xp21.3b	Homo sapiens DDB1 and CUL4 associated factor 8-like 1 (DCAF8L1), mRNA.				FLJ46244	FLJ46244
Homo sapiens	RefSeq	NM_001025.4	ILMN_27526	RPS23	NM_001025.4	NM_001025.4		6228	71772514	NM_001025.4	RPS23	NP_001016.1	ILMN_1772459	0000380070	S	3115	CTCCCTGTTGTGTTCTGTACCAGTGCATGAAACCCCTGTCACATATCCCC	5	-	81605044-81605093	5q14.2a	Homo sapiens ribosomal protein S23 (RPS23), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 8415000] [evidence NAS]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 8706699] [evidence IDA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	FLJ35016	FLJ35016
Homo sapiens	RefSeq	XM_927553.1	ILMN_43532	LOC644408	XM_927553.1	XM_927553.1		644408	88997739	XM_927553.1	LOC644408	XP_932646.1	ILMN_1694246	0001430609	S	121	TTTGAAAGAAATTCTACTGTGGCTGAAATGCTATCAAATAGCTTCTCACA	6	-	120516992-120517041		PREDICTED: Homo sapiens hypothetical protein LOC644408 (LOC644408), mRNA.					
Homo sapiens	Unigene	Hs.105791	ILMN_74938	HS.105791	Hs.105791		Hs.105791		39795805	BC064139			ILMN_1840316	0006100446	S	1360	CTACACCCACATCCATTGTCACTTTTTGTCTATCACCTGGGCTTCAAGGC	1	-	85391021-85391070		Homo sapiens cDNA clone IMAGE:6186815, partial cds					
Homo sapiens	RefSeq	NM_001005188.1	ILMN_175988	OR6X1	NM_001005188.1	NM_001005188.1		390260	52353273	NM_001005188.1	OR6X1	NP_001005188.1	ILMN_2140034	0006100563	S	539	GGCCCAGTTTGAAAGCCGCCTGCATAGACACCAGCATTTTGGAACTCCTG	11	-	123624638-123624687	11q24.1c	Homo sapiens olfactory receptor, family 6, subfamily X, member 1 (OR6X1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-270	OR11-270
Homo sapiens	RefSeq	NR_030371.1	ILMN_388167	MIR641	NR_030371.1	NR_030371.1		693226	262206195	NR_030371.1	MIR641		ILMN_3308190	0007100068	S	29	GAGTCACCTCTGTCCTCTGTCCTCTACCTATAGAGGTGACTGTCCTATGT				19q13.2b	Homo sapiens microRNA 641 (MIR641), microRNA.					
Homo sapiens	RefSeq	XM_931545.1	ILMN_42623	LOC643435	XM_931545.1	XM_931545.1		643435	89035508	XM_931545.1	LOC643435	XP_936638.1	ILMN_1773743	0001240445	S	341	ATGCTCCGGTCGCAGGAGGAAAAGGAGGAGCTGGACCAAAAGCCCGAAGA	12	+	48641450-48641499		PREDICTED: Homo sapiens hypothetical protein LOC643435 (LOC643435), mRNA.					
Homo sapiens	RefSeq	NM_001001931.1	ILMN_11550	MTUS1	NM_001001931.1	NM_001001931.1		57509	50348625	NM_001001931.1	MTUS1	NP_001001931.1	ILMN_1685044	0001030193	I	418	GGCACTATGATGCTACCTTATTGACACTGCTGGTCGTGGGATCGTACAGC	8	-	17623543-17623592	8p22b	Homo sapiens mitochondrial tumor suppressor 1 (MTUS1), nuclear gene encoding mitochondrial protein, transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]		MTSG1; MP44; DKFZp586D1519; ATIP; FLJ14295; KIAA1288; DKFZp686F20243	MTSG1; MP44; DKFZp586D1519; ATIP; FLJ14295; KIAA1288; DKFZp686F20243
Homo sapiens	RefSeq	XM_938824.3	ILMN_43324	LOC649752	XM_938824.3	XM_938824.3		649752	169218022	XM_938824.3	LOC649752	XP_943917.3	ILMN_3239495	0002630193	S	118	TTGCCAACTCCCCAGAATACCCCCAAGGAGGCCAACCAAGCCCATTCAGG					PREDICTED: Homo sapiens similar to KIAA0454 protein (LOC649752), mRNA.					
Homo sapiens	RefSeq	NM_144693.1	ILMN_11717	ZNF558	NM_144693.1	NM_144693.1		148156	21687263	NM_144693.1	ZNF558	NP_653294.1	ILMN_1766195	0004070176	S	2769	TGGAGAAACCCCTAGGAATGTAATCAGTGTTAGGATGCCTCAGCCTGAAC	19	-	8920577-8920626	19p13.2d	Homo sapiens zinc finger protein 558 (ZNF558), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ30932	FLJ30932
Homo sapiens	RefSeq	XM_934848.1	ILMN_30992	LOC653547	XM_934848.1	XM_934848.1		653547	89040172	XM_934848.1	LOC653547	XP_939941.1	ILMN_1679157	0006510451	I	2	CCCAGGCAACCCTGGGAGACAGTGGGAGGTCATTATACTCTGGTAACCCT	16	-	33035537-33035586		PREDICTED: Homo sapiens similar to hect domain and RLD 2, transcript variant 3 (LOC653547), mRNA.					
Homo sapiens	RefSeq	NM_001892.4	ILMN_25098	CSNK1A1	NM_001025105.1	NM_001025105.1		1452	68303574	NM_001025105.1	CSNK1A1	NP_001020276.1	ILMN_1785988	0007210241	A	2710	GTACTGCAACTGCCAGAACTTGGTATTGTAGCTGCTGCCCGCTGACTAGC	5	-	148876254-148876303	5q33.1b	Homo sapiens casein kinase 1, alpha 1 (CSNK1A1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16753179] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12820959] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11955436] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12000790] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15327769] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10777483] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HLCDGP1; PRO2975; CK1	HLCDGP1; PRO2975; CK1
Homo sapiens	RefSeq	NM_001025105.1	ILMN_25098	CSNK1A1	NM_001025105.1	NM_001025105.1		1452	68303574	NM_001025105.1	CSNK1A1	NP_001020276.1	ILMN_1775058	0007200376	I	949	CCAGTGGGGAAGAGGAAAAGAAGCATGACTGTTAGTACTTCTCAGGACCC	5	-	148910912-148910961	5q33.1b	Homo sapiens casein kinase 1, alpha 1 (CSNK1A1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16753179] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12820959] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11955436] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12000790] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15327769] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10777483] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HLCDGP1; PRO2975; CK1	HLCDGP1; PRO2975; CK1
Homo sapiens	RefSeq	XM_929997.1	ILMN_41669	LOC441488	XM_929997.1	XM_929997.1		441488	89059460	XM_929997.1	LOC441488	XP_935090.1	ILMN_1814007	0002470747	A	1929	CTGTGGAGTTTTCCATTTGTTCAGTGGTACGGTGTCCAGAGCCCCAAGCA	X	-	36889702-36889751	Xp21.1a	PREDICTED: Homo sapiens similar to Transcription factor Dp-1 (E2F dimerization partner 1) (DRTF1-polypeptide-1) (DRTF1), transcript variant 2 (LOC441488), mRNA.					
Homo sapiens	RefSeq	NM_001131066.1	ILMN_364895	RFESD	NM_001131066.1	NM_001131066.1		317671	197100549	NM_001131066.1	RFESD	NP_001124538.1	ILMN_3250850	0002750491	M	1511	GGCAGATCTTGAAGTAAGGAAGCCAGACACAGCTGCTGCCCAGCCATGAG	5	+	94992715-94992764	5q15c	Homo sapiens Rieske (Fe-S) domain containing (RFESD), transcript variant 3, mRNA.		The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51537] [evidence IEA]		
Homo sapiens	RefSeq	NM_152665.1	ILMN_28655	TCTEX1D1	NM_152665.1	NM_152665.1		200132	22749350	NM_152665.1	TCTEX1D1	NP_689878.1	ILMN_1751868	0007560300	S	1705	AATGATGTTGTGGCGTTGTTCTTGGATGGTAAGTGGACTGCCTAGAGGAC	1	+	67016761-67016810	1p31.3a	Homo sapiens Tctex1 domain containing 1 (TCTEX1D1), mRNA.				RP11-266I14.2; FLJ40873; MGC125768	RP11-266I14.2; FLJ40873; MGC125768
Homo sapiens	RefSeq	NM_148169.1	ILMN_20838	FBXO17	NM_148169.1	NM_148169.1		115290	22325387	NM_148169.1	FBXO17	NP_680474.1	ILMN_1743898	0004260709	I	33	CGGGAGCGGCCGTGAGCCCAGAGCTAAAATTAGGGAGAAGAGAGGAGTCA	19	-	44135085-44135134	19q13.2a	Homo sapiens F-box protein 17 (FBXO17), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FBXO26; MGC9379; Fbx17; FLJ11798; FBG4; FLJ25205	FBXO26; MGC9379; Fbx17; FLJ11798; FBG4; FLJ25205
Homo sapiens	RefSeq	XR_015330.2	ILMN_163478	LOC728170	XR_015330.2	XR_015330.2		728170	169203797	XR_015330.2	LOC728170		ILMN_3293025	0003180546	M	614	CAAGAGATGGCTAGGGCTTTATCCAGCCAAAGAGGCTGAAGTGGTTCTAG	12	+	91802225-91802274	12q22a	PREDICTED: Homo sapiens misc_RNA (LOC728170), miscRNA.					
Homo sapiens	RefSeq	NM_000837.1	ILMN_14159	GRINA	NM_000837.1	NM_000837.1		2907	57165372	NM_000837.1	GRINA	NP_000828.1	ILMN_1796490	0000070070	A	1637	GTGCCACCTCCTGTCTACTCATTGTTGCATGAGCCCTGTCTGCCAGCCCA	8	+	145067252-145067301	8q24.3g	Homo sapiens glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding) (GRINA), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HNRGW; NMDARA1; TMBIM3; MGC99687	HNRGW; NMDARA1; TMBIM3; MGC99687
Homo sapiens	RefSeq	NM_002430.2	ILMN_177685	MN1	NM_002430.2	NM_002430.2		4330	55956909	NM_002430.2	MN1	NP_002421.3	ILMN_2111237	0006480259	S	7217	ACACACCCTACACACTAGACTCCGAACACTGGTAATCAGTACTGCATAGC	22	-	28144554-28144603	22q12.1b	Homo sapiens meningioma (disrupted in balanced translocation) 1 (MN1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGCR1-PEN; MGCR; MGCR1; dJ353E16.2	MGCR1-PEN; MGCR; MGCR1; dJ353E16.2
Homo sapiens	RefSeq	NM_002430.2	ILMN_177685	MN1	NM_002430.2	NM_002430.2		4330	55956909	NM_002430.2	MN1	NP_002421.3	ILMN_1732197	0000630546	S	6989	GGCCGGGGAGCAAAGTGTCTTAACTTCTGTCTTTGACTTTCCCAGCGTTG	22	-	28144782-28144831	22q12.1b	Homo sapiens meningioma (disrupted in balanced translocation) 1 (MN1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGCR1-PEN; MGCR; MGCR1; dJ353E16.2	MGCR1-PEN; MGCR; MGCR1; dJ353E16.2
Homo sapiens	RefSeq	NM_024560.2	ILMN_4608	ACSS3	NM_024560.2	NM_024560.2		79611	38505216	NM_024560.2	ACSS3	NP_078836.1	ILMN_1659885	0002810154	S	2673	GGTAGGAGGGCTTTTCTATACATTTTCTGAGGGAAAGCAGAACACCGGGG	12	+	80173353-80173402	12q21.31b	Homo sapiens acyl-CoA synthetase short-chain family member 3 (ACSS3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA [goid 3987] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ21963	FLJ21963
Homo sapiens	RefSeq	XM_375147.3	ILMN_44154	LOC400298	XM_375147.3	XM_375147.3		400298	89038801	XM_375147.3	LOC400298	XP_375147.3	ILMN_1782924	0002260368	S	763	CAGCAAAGGTAAGGCTGTCCTGGCACAGTCGTGCAGCCCCACAGGTATAG					PREDICTED: Homo sapiens similar to breast cancer anti-estrogen resistance 1 (LOC400298), mRNA.					
Homo sapiens	RefSeq	XM_001716912.1	ILMN_347843	LOC100128892	XM_001716912.1	XM_001716912.1		100128892	169166058	XM_001716912.1	LOC100128892	XP_001716964.1	ILMN_3191393	0001770100	A	355	TGGACTTTAAGGGACGTCCTGTGTCAGCACAAGGGACTGGCACACACAGA				3q13.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128892 (LOC100128892), mRNA.					
Homo sapiens	RefSeq	XM_943582.1	ILMN_39443	LOC647946	XM_943582.1	XM_943582.1		647946	89047384	XM_943582.1	LOC647946	XP_948675.1	ILMN_1773193	0000160707	I	26	GCAGACCATATTGAAATACGCAGAGAATTCCATGGAGACTCTGATGGCTA					PREDICTED: Homo sapiens hypothetical protein LOC647945, transcript variant 1 (LOC647946), mRNA.					
Homo sapiens	RefSeq	NM_133499.1	ILMN_1145	SYN1	NM_133499.2	NM_133499.2		6853	91984782	NM_133499.2	SYN1	NP_598006.1	ILMN_1660693	0004060300	A	1812	ACAGGCTACCCGTCAGACATCCGTCTCTGGCCCGGCTCCGCCAAAGGCCT	X	-	47433650-47433699	Xp11.23f	Homo sapiens synapsin I (SYN1), transcript variant Ib, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 2110562] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 2110562] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SYN1a; SYNI; SYN1b	SYN1a; SYN1b; SYNI
Homo sapiens	RefSeq	NM_145239.1	ILMN_1878	PRRT2	NM_145239.1	NM_145239.1		112476	21687111	NM_145239.1	PRRT2	NP_660282.1	ILMN_1724424	0006350112	S	2246	AGGAGGCGGGGACCGAGCTACAACGCGGTTCGGATTTGGCGGGGGTTTTT	16	+	29734492-29734541	16p11.2d	Homo sapiens proline-rich transmembrane protein 2 (PRRT2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism [goid 9607] [evidence IEA]		DKFZp547J199; FLJ25513	FLJ25513; DKFZp547J199
Homo sapiens	RefSeq	XM_942272.1	ILMN_34683	LOC652680	XM_942272.1	XM_942272.1		652680	89063679	XM_942272.1	LOC652680	XP_947365.1	ILMN_1727533	0003120551	S	271	ATCGATTCCGATGATTTCCGCCAGGCTGTGTGTGAGGACGTCTTGCTCTC					PREDICTED: Homo sapiens hypothetical protein LOC652680 (LOC652680), mRNA.					
Homo sapiens	RefSeq	XM_001716479.1	ILMN_348864	LOC728671	XM_001716479.1	XM_001716479.1		728671	169214871	XM_001716479.1	LOC728671	XP_001716531.1	ILMN_3304678	0001340725	M	730	ACCTGTGAAGGGGGTAGAGTGGTGTGGGGGGCAGTGATGTGGGGCTGGAA				20q13.13d	PREDICTED: Homo sapiens hypothetical LOC728671 (LOC728671), mRNA.					
Homo sapiens	RefSeq	NM_001098411.3	ILMN_365922	GAGE2B	NM_001098411.3	NM_001098411.3		645037	187937177	NM_001098411.3	GAGE2B	NP_001091881.1	ILMN_3245682	0003610544	S	364	AGGAGATGGACCCGCCAAATCCAGAGGAGGTGAAAACGCCTGAAGAAGGT	X	+	49240412-49240459:49242900-49242901	Xp11.23b	Homo sapiens G antigen 2B (GAGE2B), mRNA.					
Homo sapiens	RefSeq	XM_936492.1	ILMN_8144	SNCB	NM_001001502.1	NM_001001502.1		6620	48255902	NM_001001502.1	SNCB	NP_001001502.1	ILMN_1779343	0000840671	A	551	CGTCCTCTACGTCGGAAGCAAGACCCGAGAAGGTGTGGTACAAGGTGTGG	5	-	176053726-176053762:176056535-176056547	5q35.2d	Homo sapiens synuclein, beta (SNCB), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The chemical reactions and pathways involving dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42417] [evidence IEA]	Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [pmid 9806846] [evidence TAS]		
Homo sapiens	RefSeq	NM_001098416.2	ILMN_309617	HDAC7	NM_001098416.2	NM_001098416.2		51564	169234808	NM_001098416.2	HDAC7	NP_001091886.1	ILMN_3189715	0004900181	A	3896	CCTGACTGAGGGGGAAGGGGTGGGAGAGAAGATACAGACATGGAGGAGGG	12	-	48176738-48176787	12q13.11b-q13.11c	Homo sapiens histone deacetylase 7 (HDAC7), transcript variant 4, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12711221] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12711221] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12711221] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12711221] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12711221] [evidence TAS]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 12711221] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZP586J0917; FLJ99588; HDAC7A; HD7A	DKFZP586J0917; FLJ99588; HDAC7A; HD7A
Homo sapiens	RefSeq	NM_001098416.2	ILMN_309617	HDAC7	NM_001098416.2	NM_001098416.2		51564	169234808	NM_001098416.2	HDAC7	NP_001091886.1	ILMN_3266186	0005420050	M	3598	TTCCCTCTACCACTGGGCACTGAGACGAAGCTCCCTGACAGCCGAGACTG	12	-	48177036-48177085	12q13.11b-q13.11c	Homo sapiens histone deacetylase 7 (HDAC7), transcript variant 4, mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12711221] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12711221] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 12711221] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12711221] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 12711221] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [pmid 12711221] [evidence TAS]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 12711221] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Any activity that stops or downregulates transcription of specific genes or sets of genes [goid 16566] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZP586J0917; FLJ99588; HDAC7A; HD7A	DKFZP586J0917; FLJ99588; HDAC7A; HD7A
Homo sapiens	RefSeq	NM_001845.3	ILMN_24359	COL4A1	NM_001845.4	NM_001845.4		1282	148536824	NM_001845.4	COL4A1	NP_001836.2	ILMN_1653028	0005910431	S	6270	CATCGCATGGACCGCAGGAGGGCAGATTCGGACCACTAGGCCTGAAATGA	13	-	110801522-110801571	13q34a	Homo sapiens collagen, type IV, alpha 1 (COL4A1), mRNA.	Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]		The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	arresten	arresten
Homo sapiens	RefSeq	NM_002358.2	ILMN_23985	MAD2L1	NM_002358.2	NM_002358.2		4085	6466452	NM_002358.2	MAD2L1	NP_002349.1	ILMN_2112460	0001780576	S	1009	CCTAAATCAGATGTTTTGGTCAAGTAGTTTGACTCAGTATAGGTAGGGAG	4	-	121200354-121200403	4q27a	Homo sapiens MAD2 mitotic arrest deficient-like 1 (yeast) (MAD2L1), mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 8824189] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12006501] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11804586] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11181178] [evidence EXP]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10527948] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022368] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022367] [evidence IPI]	MAD2; HSMAD2	MAD2; HSMAD2
Homo sapiens	RefSeq	NM_002358.2	ILMN_23985	MAD2L1	NM_002358.2	NM_002358.2		4085	6466452	NM_002358.2	MAD2L1	NP_002349.1	ILMN_1777564	0000870546	S	574	GGGAAGAGTCGGGACCACAGTTTATTACCAATTCTGAGGAAGTCCGCCTT	4	-	121200789-121200838	4q27a	Homo sapiens MAD2 mitotic arrest deficient-like 1 (yeast) (MAD2L1), mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 8824189] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The microtubule organizing center in fungi; functionally homologous to the animal cell centrosome [goid 5816] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12006501] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11804586] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11181178] [evidence EXP]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10527948] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022368] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022367] [evidence IPI]	MAD2; HSMAD2	MAD2; HSMAD2
Homo sapiens	RefSeq	NM_001142.2	ILMN_11043	AMELX	NM_001142.2	NM_001142.2		265	6715562	NM_001142.2	AMELX	NP_001133.1	ILMN_2397406	0005720730	A	348	GTGATCCCCCAGCAACCAATGATGCCCGTTCCTGGCCAACACTCCATGAC	X	+	11226724-11226773	Xp22.2	Homo sapiens amelogenin (amelogenesis imperfecta 1, X-linked) (AMELX), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The deposition of calcium phosphate in bone tissue [goid 30282] [evidence NAS]; The process whose specific outcome is the progression of a tooth or teeth over time, from formation to the mature structure(s). A tooth is any hard bony, calcareous, or chitinous organ found in the mouth or pharynx of an animal and used in procuring or masticating food [goid 42476] [evidence NAS]	The action of a molecule that contributes to the structural integrity of tooth enamel [goid 30345] [evidence NAS]	AMGX; ALGN; AIH1; AMGL; AMG	AMGX; AMGL; AMG; ALGN; AIH1
Homo sapiens	RefSeq	NM_025115.1	ILMN_19175	C8ORF41	NM_025115.1	NM_025115.1		80185	13376690	NM_025115.1	C8orf41	NP_079391.1	ILMN_1760400	0004590646	S	1821	GACCGCCGTTCTCAAGGACGGGTAAAGGGTCTCCTGGCCAAAATTCCCCA	8	-	33476311-33476337:33477388-33477410	8p12c	Homo sapiens chromosome 8 open reading frame 41 (C8orf41), mRNA.				FLJ23263	FLJ23263
Homo sapiens	RefSeq	NM_033438.1	ILMN_10645	SLAMF9	NM_033438.1	NM_033438.1		89886	15559204	NM_033438.1	SLAMF9	NP_254273.1	ILMN_2227248	0003940307	S	1029	TTCCAGGGGAAGGAGGTGCTCAGGGGTGGGTATCCAGAGAGCCATACTTC	1	-	158187949-158187998	1q23.2c	Homo sapiens SLAM family member 9 (SLAMF9), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			CD84-H1; MGC88194; PRO4421; SF2001; CD2F-10	CD84-H1; MGC88194; PRO4421; SF2001; CD2F-10
Homo sapiens	RefSeq	NM_001024680.1	ILMN_8940	FBXO48	NM_001024680.1	NM_001024680.1		554251	67003565	NM_001024680.1	FBXO48	NP_001019851.1	ILMN_2102257	0006520754	S	2399	CTGCCCATTTACTCTTAACAAAAGAAAGGGGCTGTGCGCCATGGCTCACG	2	-	68689768-68689817	2p14a	Homo sapiens F-box protein 48 (FBXO48), mRNA.					
Homo sapiens	RefSeq	NM_001024680.1	ILMN_8940	FBXO48	NM_001024680.1	NM_001024680.1		554251	67003565	NM_001024680.1	FBXO48	NP_001019851.1	ILMN_1656342	0002060609	S	2225	CTGTAACGTTTGCCTTCTAGCCCCACTTCCACCCTCTAGAACCAGGCTGA	2	-	68689942-68689991	2p14a	Homo sapiens F-box protein 48 (FBXO48), mRNA.					
Homo sapiens	RefSeq	XM_940188.1	ILMN_307837	RNF169	NM_001098638.1	NM_001098638.1		254225	148839381	NM_001098638.1	RNF169	NP_001092108.1	ILMN_1732969	0003940681	A	2084	AAAGGAAGTGTGGATCAGTATCTCCTACGGTCCAGCAACATGGCCGGGGC	11	+	74225367-74225416	11q13.4c	Homo sapiens ring finger protein 169 (RNF169), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1991	
Homo sapiens	RefSeq	NM_014058.2	ILMN_25694	TMPRSS11E	NM_014058.2	NM_014058.2		28983	40254870	NM_014058.2	TMPRSS11E	NP_054777.2	ILMN_1740007	0005270170	S	2054	ACATTGTTACTGAGGATGTCAACATATAACAATAAAATATAAATCACCCA	4	+	69045868-69045917	4q13.2b-q13.2c	Homo sapiens transmembrane protease, serine 11E (TMPRSS11E), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence ISS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC141974; MGC141972; DESC1	MGC141974; MGC141972; DESC1
Homo sapiens	RefSeq	NM_003617.2	ILMN_7090	RGS5	NM_003617.2	NM_003617.2		8490	41387215	NM_003617.2	RGS5	NP_003608.1	ILMN_1651554	0000160445	S	5097	CCTGGCTTTGAATGGAAACTTACAGCAGAGAGTCACAGGCCACGGCAACA	1	-	163112778-163112827	1q23.3c	Homo sapiens regulator of G-protein signaling 5 (RGS5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 10471929] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 10471929] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	MSTP092; MST129; MST092; MSTP129; MST106; MSTP032; MSTP106	MSTP092; MST129; MST092; MSTP129; MST106; MSTP032; MSTP106
Homo sapiens	RefSeq	NM_006587.2	ILMN_28881	CORIN	NM_006587.2	NM_006587.2		10699	29244925	NM_006587.2	CORIN	NP_006578.2	ILMN_1712998	0005810592	S	4566	CTAGGATTCCCTACTAACCTCCACCAGCAACCTGGACTGCCTCAGCATTC	4	-	47596344-47596393	4p12a	Homo sapiens corin, serine peptidase (CORIN), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10880574] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10329693] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10329693] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 10880574] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10329693] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 10880574] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10329693] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 10880574] [evidence TAS]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	Lrp4; TMPRSS10; MGC119742; CRN; ATC2	Lrp4; TMPRSS10; MGC119742; CRN; ATC2
Homo sapiens	Unigene	Hs.544215	ILMN_107672	HS.544215	Hs.544215		Hs.544215		5542896	AI868892			ILMN_1865411	0002640553	S	221	CCTCACTGGGGCCTTAACATCTTTATTGGAAAATGGATTTTGTTCTTTGC	5	+	18731506-18731555		wc17b03.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:2315405 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014594.1	ILMN_7515	ZNF354C	NM_014594.1	NM_014594.1		30832	30794503	NM_014594.1	ZNF354C	NP_055409.1	ILMN_2224946	0001090017	S	2156	ATAAGTGTGTGGCCTTCTTTAAAATAGCTGGCTAACATAGGAGGCACTTC	5	+	178440080-178440129	5q35.3d	Homo sapiens zinc finger protein 354C (ZNF354C), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KID3	KID3
Homo sapiens	RefSeq	NM_014594.1	ILMN_7515	ZNF354C	NM_014594.1	NM_014594.1		30832	30794503	NM_014594.1	ZNF354C	NP_055409.1	ILMN_1690276	0005820725	S	1690	GTGGAAGGAATATGGGAAACCTTTCATCTGCAGCTCCTCACTTACCCAGT	5	+	178439614-178439663	5q35.3d	Homo sapiens zinc finger protein 354C (ZNF354C), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KID3	KID3
Homo sapiens	RefSeq	NM_022895.1	ILMN_19852	C12ORF43	NM_022895.1	NM_022895.1		64897	12597630	NM_022895.1	C12orf43	NP_075046.1	ILMN_2169856	0000580014	S	1566	CTTCAGGAAGTGTCATAGCACTCGTGGACTAGGTTTCATGGGACAAAGGC	12	-	121441152-121441201	12q24.31a	Homo sapiens chromosome 12 open reading frame 43 (C12orf43), mRNA.				FLJ12448	FLJ12448
Homo sapiens	RefSeq	NM_022895.1	ILMN_19852	C12ORF43	NM_022895.1	NM_022895.1		64897	12597630	NM_022895.1	C12orf43	NP_075046.1	ILMN_1737818	0000050414	S	1395	GGTGTCTCTGAGCCGACCAGATTATGGAAACTCAATTGTCAGAGGACCCA	12	-	121441323-121441372	12q24.31a	Homo sapiens chromosome 12 open reading frame 43 (C12orf43), mRNA.				FLJ12448	FLJ12448
Homo sapiens	RefSeq	NM_017573.3	ILMN_5704	PCSK4	NM_017573.3	NM_017573.3		54760	76443678	NM_017573.3	PCSK4	NP_060043.2	ILMN_1769018	0001710538	S	2546	AGAGGCTGGAGCACCCCAAAAGCCAGGGGAAAGTGGAGGGAGAGAAACGT	19	-	1481492-1481541	19p13.3h	Homo sapiens proprotein convertase subtilisin/kexin type 4 (PCSK4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	SPC5; MGC34749; DKFZp434B217; PC4	SPC5; MGC34749; DKFZp434B217; PC4
Homo sapiens	RefSeq	XR_038931.1	ILMN_341691	LOC100134587	XR_038931.1	XR_038931.1		100134587	169170191	XR_038931.1	LOC100134587		ILMN_3240981	0003120131	S	629	TGTTCCCAGAGAAGCACACTTTGTGAGAAGCAGTGGAGAGGAACCTGAGC	7	+	3425927-3425976		PREDICTED: Homo sapiens misc_RNA (LOC100134587), miscRNA.					
Homo sapiens	RefSeq	NR_002193.1	ILMN_15270	RBMY2FP	NR_002193.1	NR_002193.1		159162	56605984	NR_002193.1	RBMY2FP		ILMN_2145781	0006370037	S	1718	TGTCTCCATTGCTTTTGAGGGTGAAGTTCAACAACACTCCACCATGTCTG	Y	+	22871414-22871463	Yq11.223b	Homo sapiens RNA binding motif protein, Y-linked, family 2, member F pseudogene (RBMY2FP), non-coding RNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC26641	MGC26641
Homo sapiens	RefSeq	XM_001715446.1	ILMN_343689	LOC100134376	XM_001715446.1	XM_001715446.1		100134376	169217113	XM_001715446.1	LOC100134376	XP_001715498.1	ILMN_3242618	0004860593	S	469	GTTTAACACAGAGACAGCCGTGAACCCCAAGTCCACCCTGAGGCGGAGGC					PREDICTED: Homo sapiens similar to novel similar to human Nance-Horan syndrome protein (RP11-262D11.5) (LOC100134376), mRNA.					
Homo sapiens	RefSeq	XM_001715185.1	ILMN_348703	LOC100134182	XM_001715185.1	XM_001715185.1		100134182	169210701	XM_001715185.1	LOC100134182	XP_001715237.1	ILMN_3246514	0000630326	S	281	GGGGGGCGGCGGCCAGCCGGGCGCTGCAGCAGTGCGGGCAGCTCCAGAAC					PREDICTED: Homo sapiens similar to hCG1793095 (LOC100134182), mRNA.					
Homo sapiens	RefSeq	NM_145320.1	ILMN_17481	OSBPL3	NM_145321.1	NM_145321.1		26031	21735581	NM_145321.1	OSBPL3	NP_663161.1	ILMN_1735798	0002360446	A	6493	TGTTTTAATCCCACCCTTCCATCCATACCTCTGCCTCCCCAAAAAGCTCC	7	-	24838401-24838450	7p15.3a-p15.2c	Homo sapiens oxysterol binding protein-like 3 (OSBPL3), transcript variant 3, mRNA.		The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC21526; DKFZp667P1518; ORP3; OSBP3; KIAA0704; ORP-3	MGC21526; DKFZp667P1518; ORP3; OSBP3; KIAA0704; ORP-3
Homo sapiens	RefSeq	NM_000856.2	ILMN_11680	GUCY1A3	NM_000856.3	NM_000856.3		2982	141801455	NM_000856.3	GUCY1A3	NP_000847.2	ILMN_1808590	0004860681	S	2249	CTGCACTCTGGATCAGTTTTTGCTGGCGTCGTTGGAGTTAAAATGCCCCG	4	+	156862652-156862701	4q32.1b	Homo sapiens guanylate cyclase 1, soluble, alpha 3 (GUCY1A3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Complex that possesses guanylate cyclase activity and is not bound to a membrane [goid 8074] [pmid 1352257] [evidence TAS]	A series of molecular signals mediated by the detection of nitric oxide (NO) [goid 7263] [pmid 9742212] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cGMP [goid 30828] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of nitric oxide produced as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction [goid 52565] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle contraction [goid 60087] [evidence IEA]	Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [pmid 9742212] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9742212] [evidence TAS]	GUCA3; GC-SA3; GUC1A3; GUCSA3	GUCA3; GC-SA3; GUC1A3; GUCSA3
Homo sapiens	RefSeq	NM_022819.2	ILMN_9383	PLA2G2F	NM_022819.3	NM_022819.3		64600	145553988	NM_022819.3	PLA2G2F	NP_073730.3	ILMN_1724799	0004050561	S	2372	TTTCCAGAGCCCCAGCCTTGGAGACAAGGACACTGCCACCCAGCGCCACA	1	+	20349119-20349168	1p36.12b	Homo sapiens phospholipase A2, group IIF (PLA2G2F), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11112443] [evidence NAS]	The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 6644] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [pmid 11112443] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ25429; FLJ36326	FLJ25429; FLJ36326
Homo sapiens	RefSeq	NM_014800.8	ILMN_33356	ELMO1	NM_014800.9	NM_014800.9		9844	86787650	NM_014800.9	ELMO1	NP_055615.8	ILMN_1784320	0002750154	A	3352	AGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCC	7	-	37019515-37019564	7p14.2a	Homo sapiens engulfment and cell motility 1 (ELMO1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11595183] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14737186] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11595183] [evidence IDA]	The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [pmid 11595183] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11595183] [evidence NAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 11595183] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [pmid 11595183] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 11595183] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12879077] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12029088] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15247908] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 12029088] [evidence IPI]	CED-12; KIAA0281; ELMO-1; MGC126406; CED12	CED12; KIAA0281; ELMO-1
Homo sapiens	RefSeq	NM_014800.8	ILMN_33356	ELMO1	NM_014800.9	NM_014800.9		9844	86787650	NM_014800.9	ELMO1	NP_055615.8	ILMN_1663627	0007560561	I	1587	TCTTGAAAGTGGGCGAGTTGCCTAGTGAGACCTGCAACGACTTCCACCCG	7	-	37264575-37264624	7p14.2a	Homo sapiens engulfment and cell motility 1 (ELMO1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11595183] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14737186] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11595183] [evidence IDA]	The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis [goid 6911] [pmid 11595183] [evidence IGI]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11595183] [evidence NAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 11595183] [evidence IGI]; A series of molecular signals within the cell that are mediated by a member of the Rac family of proteins switching to a GTP-bound active state [goid 16601] [pmid 11595183] [evidence IGI]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 11595183] [evidence IGI]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12879077] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12029088] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15247908] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 12029088] [evidence IPI]	CED-12; KIAA0281; ELMO-1; MGC126406; CED12	CED12; KIAA0281; ELMO-1
Homo sapiens	RefSeq	NM_020185.3	ILMN_15436	DUSP22	NM_020185.3	NM_020185.3		56940	34147625	NM_020185.3	DUSP22	NP_064570.1	ILMN_1730765	0000610072	I	560	GCCAGGCCTATGTTGGAGGGAGTTAAATACCTGTGCATCCCAGCAGCGGA	6	+	256945-256962:280114-280145	6p25.3b	Homo sapiens dual specificity phosphatase 22 (DUSP22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [pmid 9205128] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9205128] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9205128] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9205128] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9205128] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MKPX; VHX; JSP1; JKAP	MKPX; VHX; JSP1; JKAP
Homo sapiens	RefSeq	NM_020185.3	ILMN_15436	DUSP22	NM_020185.3	NM_020185.3		56940	34147625	NM_020185.3	DUSP22	NP_064570.1	ILMN_1671809	0003710626	A	1181	TTCCCCTTATCCCCACTGCTGTGGAGGTTTCTGTACCTCGCTTGGATGCC	6	+	293121-293170	6p25.3b	Homo sapiens dual specificity phosphatase 22 (DUSP22), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [pmid 9205128] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9205128] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9205128] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9205128] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9205128] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MKPX; VHX; JSP1; JKAP	MKPX; VHX; JSP1; JKAP
Homo sapiens	RefSeq	XM_496981.3	ILMN_182911	REXO1L3P	XM_496981.3	XM_496981.3		441359	113420145	XM_496981.3	REXO1L3P	XP_496981.2	ILMN_3237817	0004180671	S	1768	CTGGCCCTGAAGCTCATCCACAACACCGTGGTGGACACGGCCGTGCTCTT	8	-	86754324-86754373	8q21.2b	PREDICTED: Homo sapiens REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 3 (pseudogene) (REXO1L3P), mRNA.					
Homo sapiens	RefSeq	XM_937032.1	ILMN_33103	LOC647974	XM_937032.1	XM_937032.1		647974	88957842	XM_937032.1	LOC647974	XP_942125.1	ILMN_1655701	0005490095	S	2	TGATCAGCATTGTCCACATTTACAATCGATGGAGAAACAGTGAAATTCAG					PREDICTED: Homo sapiens similar to Neurobeachin protein (Lysosomal trafficking regulator 2) (BCL8B protein) (LOC647974), mRNA.					
Homo sapiens	RefSeq	NM_182532.1	ILMN_167894	TMEM61	NM_182532.1	NM_182532.1		199964	32698901	NM_182532.1	TMEM61	NP_872338.1	ILMN_1667115	0000670707	S	786	CCTGGCCTCCACCCAGCTATGAGAGCATCAGCCTTGCTCTTGATGCCGTT	1	+	55230243-55230292	1p32.3b-p32.3a	Homo sapiens transmembrane protein 61 (TMEM61), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_020245.3	ILMN_23594	TULP4	NM_020245.3	NM_020245.3		56995	55953099	NM_020245.3	TULP4	NP_064630.2	ILMN_2337740	0000150669	A	9980	ACTGATTCTAGGTAAGAAGGAGTCTCCACGGGTGTGCCCTGCTCAGCTGG	6	+	158849967-158850016	6q25.3d	Homo sapiens tubby like protein 4 (TULP4), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 11595174] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11595174] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11595174] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 8612280] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11595174] [evidence NAS]	RP3-442A17.1; KIAA1397; TUSP	TUSP; RP3-442A17.1; KIAA1397
Homo sapiens	RefSeq	NM_020245.3	ILMN_23594	TULP4	NM_020245.3	NM_020245.3		56995	55953099	NM_020245.3	TULP4	NP_064630.2	ILMN_2255605	0005050646	I	5609	GAGCTCATGAACCAGAGCCAGGGCAGCAGAAAGGGCTGGAAAAGCAAGCG	6	+	158843197-158843246	6q25.3d	Homo sapiens tubby like protein 4 (TULP4), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 11595174] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11595174] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11595174] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 8612280] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11595174] [evidence NAS]	RP3-442A17.1; KIAA1397; TUSP	TUSP; RP3-442A17.1; KIAA1397
Homo sapiens	RefSeq	NM_024318.1	ILMN_27203	LILRA6	NM_024318.1	NM_024318.1		79168	13324689	NM_024318.1	LILRA6	NP_077294.1	ILMN_1651404	0002260520	S	1234	GAGCCCCTGGAACTCATGGTCTCAGCCTCACACGCCAAGGATTACACAGT	19	-	59434752-59434777:59435962-59435985	19q13.42a	Homo sapiens leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6 (LILRA6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	LILRB6; CD85b; ILT8	LILRB6; CD85b; ILT8
Homo sapiens	RefSeq	NR_030308.1	ILMN_388029	MIR582	NR_030308.1	NR_030308.1		693167	262205881	NR_030308.1	MIR582		ILMN_3308280	0000070156	S	45	CTAATTGTAACTGGTTGAACAACTGAACCCAAAGGGTGCAAAGTAGAAAC				5q12.1a	Homo sapiens microRNA 582 (MIR582), microRNA.					
Homo sapiens	RefSeq	XM_373566.3	ILMN_36373	LOC387931	XM_373566.3	XM_373566.3		387931	89036762	XM_373566.3	LOC387931	XP_373566.1	ILMN_1771483	0000730446	S	82	GTGTGTTTAAATGTTGGATTATAATCCAATACTACTTGATTTTGTTGCTC	13	-	57705316-57705365		PREDICTED: Homo sapiens hypothetical LOC387931 (LOC387931), mRNA.					
Homo sapiens	RefSeq	NM_153688.2	ILMN_24029	ZFP1	NM_153688.2	NM_153688.2		162239	119226228	NM_153688.2	ZFP1	NP_710155.2	ILMN_2133936	0002100333	S	2982	CCTAGGAATCTCCTGGGAATCTATCCCTAAGGAATAAAAAGCGCCAGCAC	16	+	73763327-73763376	16q23.1a	Homo sapiens zinc finger protein 1 homolog (mouse) (ZFP1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ34243; ZNF475	FLJ34243; ZNF475
Homo sapiens	RefSeq	NM_153464.1	ILMN_175838	ILF3	NM_012218.2	NM_012218.2		3609	24234749	NM_012218.2	ILF3	NP_036350.2	ILMN_1789018	0001780053	A	2094	GGGGGACCGAAATTTGCTGCTAAGCCACATAACCCTGGCTTCGGCATGGG	19	+	10655195-10655218:10655312-10655337	19p13.2b	Homo sapiens interleukin enhancer binding factor 3, 90kDa (ILF3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10400669] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11739746] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	Progression through M phase, the part of the cell cycle comprising nuclear division [goid 279] [pmid 8885239] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11739746] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11739746] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10574923] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7519613] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 10574923] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11739746] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10574923] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442054] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 11739746] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 11739746] [evidence IDA]	NF-AT-90; NFAR-1; NFAR; MPHOSPH4; TCP80; MMP4; DRBF; NF90; MPP4; DRBP76	NF-AT-90; NFAR-1; NFAR; MPHOSPH4; TCP80; MMP4; DRBF; NF90; MPP4; DRBP76
Homo sapiens	RefSeq	NM_012218.2	ILMN_175838	ILF3	NM_012218.2	NM_012218.2		3609	24234749	NM_012218.2	ILF3	NP_036350.2	ILMN_1698463	0001450075	I	5865	GCAGCATAGTTGGGAGCTTCTGGATTCCATCTGCACCTGTGAGCCCCATG	19	+	10663902-10663951	19p13.2b	Homo sapiens interleukin enhancer binding factor 3, 90kDa (ILF3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10400669] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11739746] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	Progression through M phase, the part of the cell cycle comprising nuclear division [goid 279] [pmid 8885239] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 11739746] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11739746] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10574923] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7519613] [evidence IDA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 10574923] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11739746] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10574923] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442054] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 11739746] [evidence IDA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 11739746] [evidence IDA]	NF-AT-90; NFAR-1; NFAR; MPHOSPH4; TCP80; MMP4; DRBF; NF90; MPP4; DRBP76	NF-AT-90; NFAR-1; NFAR; MPHOSPH4; TCP80; MMP4; DRBF; NF90; MPP4; DRBP76
Homo sapiens	RefSeq	XR_018122.2	ILMN_170963	LOC440041	XR_018122.2	XR_018122.2		440041	169203513	XR_018122.2	LOC440041		ILMN_3280594	0004490482	M	212	AGAACATGGCTTCCATTGCCAGAAAAGCCAGCCTCCGGCAATTCCTTAGC				11q11b	PREDICTED: Homo sapiens hypothetical LOC440041 (LOC440041), mRNA.					
Homo sapiens	RefSeq	NM_003773.2	ILMN_18541	HYAL2	NM_003773.2	NM_003773.2		8692	15022800	NM_003773.2	HYAL2	NP_003764.3	ILMN_1668283	0004120133	A	1357	CATTGACCACCTGCAGACACACTTCCGCTGCCAGTGCTACTTGGGCTGGA	3	-	50330684-50330733	3p21.31b	Homo sapiens hyaluronoglucosaminidase 2 (HYAL2), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 9712871] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars [goid 6027] [pmid 9712871] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [pmid 9712871] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	LuCa-2; LUCA2	LuCa-2; LUCA2
Homo sapiens	RefSeq	NM_003773.2	ILMN_18541	HYAL2	NM_003773.2	NM_003773.2		8692	15022800	NM_003773.2	HYAL2	NP_003764.3	ILMN_1713840	0004610020	I	4	TCACCCCAGGTAAGGAGGGAGGCCACCGACCTACTGGGCCGACGGACTCC	3	-	50335093-50335142	3p21.31b	Homo sapiens hyaluronoglucosaminidase 2 (HYAL2), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 9712871] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars [goid 6027] [pmid 9712871] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [pmid 9712871] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	LuCa-2; LUCA2	LuCa-2; LUCA2
Homo sapiens	RefSeq	XM_001716089.1	ILMN_347790	LOC100129580	XM_001716089.1	XM_001716089.1		100129580	169196049	XM_001716089.1	LOC100129580	XP_001716141.1	ILMN_3267777	0007380187	M	1	ATGGAGCGCAAGCCGCGGGACACAGCTGCCAGTCTGCTCCGGCGCCGCTT				10q21.3d-q21.3e	PREDICTED: Homo sapiens hypothetical protein LOC100129580 (LOC100129580), mRNA.					
Homo sapiens	RefSeq	NM_007247.3	ILMN_13930	AP1GBP1	NM_007247.3	NM_007247.3		11276	38569408	NM_007247.3	AP1GBP1	NP_009178.3	ILMN_1805247	0001580674	A	4598	CCACTCTCAAGACTTTTTCCCAAAACATGCCTGGGCACTCTGCAGCCGTG	17	-	32952496-32952545	17q12b	Homo sapiens AP1 gamma subunit binding protein 1 (AP1GBP1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10477754] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 10477754] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of beta1, gamma1, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network [goid 30121] [pmid 10477754] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 10477754] [evidence TAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC104959; SYNG	MGC104959; SYNG
Homo sapiens	RefSeq	NM_001004329.2	ILMN_9066	DBX2	NM_001004329.2	NM_001004329.2		440097	116174747	NM_001004329.2	DBX2	NP_001004329.2	ILMN_2213759	0003840563	S	1160	GGAAGCAAGGGTGTACTTACTGGGGCTGTCTGAATGGAAGCATTCCTCCG	12	-	45410051-45410068:45410069-45410100	12q12h	Homo sapiens developing brain homeobox 2 (DBX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ16139	FLJ16139
Homo sapiens	RefSeq	NM_024019.2	ILMN_20030	NEUROG2	NM_024019.2	NM_024019.2		63973	31340581	NM_024019.2	NEUROG2	NP_076924.1	ILMN_1690993	0007610746	S	2091	AACCTAAGCAGACACGGAGCATTATCCGGATCAGCCACACACGTGTTCCC	4	-	113654267-113654316	4q25f	Homo sapiens neurogenin 2 (NEUROG2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	ngn-2; NGN2; MGC46562; Math4A; Atoh4	ngn-2; NGN2; MGC46562; Math4A; Atoh4
Homo sapiens	RefSeq	NM_001004740.1	ILMN_26791	OR5M1	NM_001004740.1	NM_001004740.1		390168	52317123	NM_001004740.1	OR5M1	NP_001004740.1	ILMN_3240726	0005720068	S	441	CCCTTACATGTATGGGTTTCTTAGTGGGTTCTCTCAGTCACTGCTAACCT	11	-	56380488-56380537	11q11c	Homo sapiens olfactory receptor, family 5, subfamily M, member 1 (OR5M1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-208; OST050	OR11-208; OST050
Homo sapiens	RefSeq	NM_002199.2	ILMN_20338	IRF2	NM_002199.3	NM_002199.3		3660	153082751	NM_002199.3	IRF2	NP_002190.2	ILMN_1765547	0000580722	S	1706	TATCTCACAGCACACTCAGCACCCCCTTCTCTGCCCATTCCCCAGCCTCT	4	-	185546400-185546449	4q35.1d	Homo sapiens interferon regulatory factor 2 (IRF2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 7507207] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8438157] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7507207] [evidence TAS]	DKFZp686F0244; IRF-2	IRF-2
Homo sapiens	RefSeq	NM_032273.2	ILMN_16858	TMEM126A	NM_032273.2	NM_032273.2		84233	34147407	NM_032273.2	TMEM126A	NP_115649.1	ILMN_2217809	0007560092	S	271	AATGTGACAAAGGCTCGCATAGCTGCTGGCTTACCAATGGCAGGGATACC	11	+	85042843-85042892	11q14.1e	Homo sapiens transmembrane protein 126A (TMEM126A), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp586C1924	DKFZp586C1924
Homo sapiens	RefSeq	NM_021187.2	ILMN_9376	CYP4F11	NM_021187.2	NM_021187.2		57834	61743919	NM_021187.2	CYP4F11	NP_067010.2	ILMN_1719883	0002260274	S	2902	CTTCTGTAGCTGATCTCCTTCCCTTGCTACACTCGGTTACTCTGGCCTTG	19	-	15884273-15884322	19p13.12a	Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 11 (CYP4F11), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10964514] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 10964514] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence NAS]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence NAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [pmid 10964514] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Homo sapiens	RefSeq	XR_037985.1	ILMN_335894	LOC100128973	XR_037985.1	XR_037985.1		100128973	169211912	XR_037985.1	LOC100128973		ILMN_3254108	0003610131	M	269	TAGCCTAGTGTCTGATGTCATCAGTCAGCACTTCATCAGAGGCAATTATG				17q23.2a	PREDICTED: Homo sapiens misc_RNA (LOC100128973), miscRNA.					
Homo sapiens	RefSeq	XR_038453.1	ILMN_351752	LOC100130624	XR_038453.1	XR_038453.1		100130624	169215554	XR_038453.1	LOC100130624		ILMN_3272476	0007210593	M	159	CACCCGGCCTGATAAAGTGCACCGACTGGGCTACAAACAAGGCCACGTTA	22	-	25613301-25613306:25613342-25613385	22q12.1b	PREDICTED: Homo sapiens misc_RNA (LOC100130624), miscRNA.					
Homo sapiens	RefSeq	XM_001722645.1	ILMN_345301	LOC644006	XM_001722645.1	XM_001722645.1		644006	169160952	XM_001722645.1	LOC644006	XP_001722697.1	ILMN_3287568	0001820427	M	1789	CCACTGGGCTTGGATGCTTTGGGCCTTTGACTGCTCCATAGGTTATGACT				1q42.2a	PREDICTED: Homo sapiens hypothetical LOC644006 (LOC644006), mRNA.					
Homo sapiens	RefSeq	XM_001722645.1	ILMN_345301	LOC644006	XM_001722645.1	XM_001722645.1		644006	169160952	XM_001722645.1	LOC644006	XP_001722697.1	ILMN_3211068	0006450762	A	1998	CTTCCGCTGCCCTCCTTCCTCAGAGGGCTTCAAGCAAAACAAACAGCCTT				1q42.2a	PREDICTED: Homo sapiens hypothetical LOC644006 (LOC644006), mRNA.					
Homo sapiens	RefSeq	XM_931048.1	ILMN_43246	LOC642731	XM_931048.1	XM_931048.1		642731	89060039	XM_931048.1	LOC642731	XP_936141.1	ILMN_2096861	0002900400	S	266	GCCCAGAGAGTCTCCATTTCTCAAGCTTTGCCACCGAACTCATCGGTCGG	X	-	114919298-114919347	Xq23d	PREDICTED: Homo sapiens hypothetical LOC642731 (LOC642731), mRNA.					
Homo sapiens	RefSeq	NM_004784.1	ILMN_22639	NDST3	NM_004784.1	NM_004784.1		9348	4758765	NM_004784.1	NDST3	NP_004775.1	ILMN_1801769	0000670537	S	2939	CACAACGTGGAACTCTCAAAGCTGCTGCACAAACTGGGTCAGCCTCTGCC	4	+	119396229-119396278	4q26e	Homo sapiens N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 (NDST3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-desulfoheparin = adenosine 3',5'-bisphosphate + heparin [goid 15016] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC130029; MGC130028	MGC130029; MGC130028
Homo sapiens	RefSeq	XM_001133339.1	ILMN_183496	LOC729534	XM_001133339.1	XM_001133339.1		729534	113415229	XM_001133339.1	LOC729534	XP_001133339.1	ILMN_3302156	0005670647	M	544	CTGGCTTCAAGATGGAGCTTGTTTACCTGCAGGTTGTCCCCCAGGATGCC				3q22.2a	PREDICTED: Homo sapiens hypothetical LOC729534 (LOC729534), mRNA.					
Homo sapiens	RefSeq	NM_207391.1	ILMN_8813	RGS9BP	NM_207391.2	NM_207391.2		388531	115496699	NM_207391.2	RGS9BP	NP_997274.2	ILMN_1675172	0006840392	S	2588	GGCATTACTGGCCCACAGAGGTTTTGAGCCAATCAGCTCTGAGACTGGGT	19	+	33168900-33168949	19q13.11a	Homo sapiens regulator of G protein signaling 9 binding protein (RGS9BP), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events involved in visual perception in which a sensory light stimulus is received by a cell and converted into a molecular signal [goid 50908] [evidence IEA]		PERRS; RGS9; R9AP; FLJ45744	FLJ45744
Homo sapiens	RefSeq	NR_002556.1	ILMN_13203	LOC388242	NR_002556.1	NR_002556.1		388242	73760397	NR_002556.1	LOC388242		ILMN_1704135	0004780356	S	690	TGGGAAGCCGTGCACGACGAGCACAATCTCCATGGGGAGGACAACAGGAA	16	-	29478071-29478120	16p11.2d	Homo sapiens coiled-coil domain containing 101 pseudogene (LOC388242), non-coding RNA.					
Homo sapiens	RefSeq	NM_014749.2	ILMN_3921	KIAA0586	NM_014749.2	NM_014749.2		9786	41281468	NM_014749.2	KIAA0586	NP_055564.2	ILMN_1651684	0000990129	S	4719	GAGTCTCAGCACAATGCAGGAGGACATGGAGTCTTCGGGGGCAGATACCT	14	+	58084349-58084398	14q23.1b	Homo sapiens KIAA0586 (KIAA0586), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]			Talpid3	Talpid3
Homo sapiens	RefSeq	XR_037977.1	ILMN_350684	LOC100129742	XR_037977.1	XR_037977.1		100129742	169164779	XR_037977.1	LOC100129742		ILMN_3271122	0002490341	M	1299	TGGAGCTTCATGGTGAAGGTAGTAGTACTGGAAAAGCCACTGGGGATGAG				2q24.2a	PREDICTED: Homo sapiens misc_RNA (LOC100129742), miscRNA.					
Homo sapiens	Unigene	Hs.202313	ILMN_81770	HS.202313	Hs.202313		Hs.202313		20364845	BQ189294			ILMN_1915777	0004060537	S	395	GAGAAAGTGGTGATGGTGCTAGCTGGAGTGATTGGCCCTGATGACCATGG	6	-	71329722-71329771		UI-E-EJ1-ajv-b-21-0-UI.r1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajv-b-21-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	XM_937974.1	ILMN_37588	LOC133609	XM_937974.2	XM_937974.2		133609	113417202	XM_937974.2	LOC133609	XP_943067.1	ILMN_1780605	0002190068	A	150	GAACCCCATCTGCAATGTAAGGGCTGGTGGACTTGCAGCAGCTGGAGATC				5q23.2e	PREDICTED: Homo sapiens similar to 60S acidic ribosomal protein P1 (LOC133609), mRNA.					
Homo sapiens	RefSeq	NM_003803.2	ILMN_22078	MYOM1	NM_003803.3	NM_003803.3		8736	140560918	NM_003803.3	MYOM1	NP_003794.3	ILMN_1680344	0000160692	S	5737	GGCCGTGTCTCGTGTGTTGTTACAGAGGTGATGTGCTTTTCGACGGGCGC	18	-	3125626-3125675	18p11.31e	Homo sapiens myomesin 1, 185kDa (MYOM1), transcript variant 1, mRNA.	Bipolar filaments formed of polymers of a muscle-specific myosin II isoform, found in the middle of sarcomeres in myofibrils [goid 5863] [pmid 6537951] [evidence TAS]	A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 7505783] [evidence TAS]	SKELEMIN; MGC134947; MGC134946	SKELEMIN
Homo sapiens	RefSeq	NM_001030002.1	ILMN_5754	GRB7	NM_001030002.1	NM_001030002.1		2886	71979666	NM_001030002.1	GRB7	NP_001025173.1	ILMN_2405254	0005900243	A	1807	AGGAGCGGGAGGGTTCCGCCACTCCAGTTTTCTCCTCTGCTTCTTTGCCT	17	+	35156778-35156827	17q12c	Homo sapiens growth factor receptor-bound protein 7 (GRB7), transcript variant 2, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 9710451] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9710451] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15806159] [evidence IPI]		
Homo sapiens	RefSeq	NM_015865.1	ILMN_10720	SLC14A1	NM_015865.1	NM_015865.1		6563	7706676	NM_015865.1	SLC14A1	NP_056949.1	ILMN_2197659	0000540689	S	2428	CCACCAAAAAGAAATAAAGGGCTGAGTGTGGTGCTCACGCCTGTAATCCC	18	+	41585005-41585054	18q12.3f	Homo sapiens solute carrier family 14 (urea transporter), member 1 (Kidd blood group) (SLC14A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7797558] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7989337] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence IEA]; The directed movement into, out of or within the cell of urea, the water-soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle [goid 15840] [pmid 7989337] [evidence TAS]	Enables the directed movement of water (H2O) into, out of, within or between cells [goid 5372] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [pmid 7797558] [evidence TAS]; Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [pmid 11435423] [evidence IDA]	RACH1; FLJ41687; UTE; HsT1341; UT-B1; HUT11; JK; UT1; FLJ33745	HsT1341; JK; UT1; FLJ33745; RACH1; FLJ41687; UTE; UT-B1; HUT11
Homo sapiens	RefSeq	NM_002735.1	ILMN_13026	PRKAR1B	NM_002735.1	NM_002735.1		5575	38257138	NM_002735.1	PRKAR1B	NP_002726.1	ILMN_1674390	0000830463	S	490	GGCCAAGGCCATCTCCAAGAACGTGCTCTTCGCTCACCTGGATGACAACG	7	-	683397-683446	7p22.3c	Homo sapiens protein kinase, cAMP-dependent, regulatory, type I, beta (PRKAR1B), mRNA.	An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [evidence IEA]; An enzyme complex, composed of regulatory and catalytic subunits, that catalyzes protein phosphorylation. Inactive forms of the enzyme have two regulatory chains and two catalytic chains; activation by cAMP produces two active catalytic monomers and a regulatory dimer [goid 5952] [pmid 1708242] [evidence NAS]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein [goid 1932] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Modulation of the activity of the enzyme cAMP-dependent protein kinase [goid 8603] [pmid 1708242] [evidence NAS]; Interacting selectively with cAMP, the nucleotide cyclic AMP (adenosine 3',5'-cyclophosphate) [goid 30552] [evidence IEA]	PRKAR1	PRKAR1
Homo sapiens	RefSeq	XM_001720388.1	ILMN_348190	GS85	XM_001720388.1	XM_001720388.1		100128785	169210175	XM_001720388.1	GS85	XP_001720440.1	ILMN_3268295	0006510747	M	1556	GCCTCAACTTCATATCCTTTGAGACTGGGCACTCGCTCTGCCCGGAGCTC	16	-	1090713-1090762	16p13.3e	PREDICTED: Homo sapiens hypothetical protein LOC100128785 (GS85), mRNA.					
Homo sapiens	RefSeq	NR_024585.1	ILMN_372122	LOC100128292	NR_024585.1	NR_024585.1		100128292	218082851	NR_024585.1	LOC100128292		ILMN_3249338	0006760014	S	2841	AGTGATGCGGCTGCAAGCCAAGGAATGTGAAGAATGGCCAGCCACCACCG	10	+	79689410-79689459	10q22.3c	Homo sapiens hypothetical LOC100128292 (LOC100128292), non-coding RNA.					
Homo sapiens	RefSeq	XM_001718399.1	ILMN_343695	LOC100128425	XM_001718399.1	XM_001718399.1		100128425	169161506	XM_001718399.1	LOC100128425	XP_001718451.1	ILMN_3263081	0001190577	M	575	CCACTTGCCGAGGGGCTGTTCTCAGTCCTCAGTTTCTTAGCCTCTGGTAT				1p36.33a	PREDICTED: Homo sapiens hypothetical protein LOC100128425 (LOC100128425), mRNA.					
Homo sapiens	RefSeq	NM_002841.2	ILMN_17149	PTPRG	NM_002841.2	NM_002841.2		5793	18860897	NM_002841.2	PTPRG	NP_002832.2	ILMN_1779674	0000450369	S	5560	ACAGACTAGCAGGCTACTGGGACCTAAAAAGGTCTGTTAATGTCATGGCC	3	+	62254527-62254576	3p14.2b	Homo sapiens protein tyrosine phosphatase, receptor type, G (PTPRG), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8382771] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 8382771] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA];  [goid 5001] [pmid 8382771] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	R-PTP-GAMMA; HPTPG; RPTPG; PTPG	HPTPG; RPTPG; R-PTP-GAMMA; PTPG
Homo sapiens	RefSeq	NM_002630.1	ILMN_22396	PGC	NM_002630.2	NM_002630.2		5225	141803236	NM_002630.2	PGC	NP_002621.1	ILMN_1795484	0000770739	S	1167	CCGTCTACGACTTGGGCAACAACAGAGTAGGCTTTGCCACTGCCGCCTAG	6	-	41812567-41812567:41812568-41812616	6p21.1f	Homo sapiens progastricsin (pepsinogen C) (PGC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3335549] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 3335549] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 3335549] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [pmid 3335549] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	XM_944078.1	ILMN_31675	LOC650187	XM_944078.1	XM_944078.1		650187	89025906	XM_944078.1	LOC650187	XP_949171.1	ILMN_1772168	0000130333	S	40	GAAGGGCTCCGCAGTTCAATTGCTTAGCTTCCAGAACTAAAAACCCTGGA					PREDICTED: Homo sapiens hypothetical protein LOC650187 (LOC650187), mRNA.					
Homo sapiens	RefSeq	NM_176096.1	ILMN_9170	CDK5RAP3	NM_176096.1	NM_176096.1		80279	28872791	NM_176096.1	CDK5RAP3	NP_788276.1	ILMN_1812557	0005550465	A	1579	GTGAACCTGATGGGAACCTCTCTGTGACACCCTCCGTGTTCTTGCCTGCC	17	+	43413841-43413867:43413868-43413890	17q21.32b	Homo sapiens CDK5 regulatory subunit associated protein 3 (CDK5RAP3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10915792] [evidence NAS]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [pmid 10721722] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17785205] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with neuronal Cdc2-like kinase, an enzyme involved in the regulation of neuronal differentiation and neuro-cytoskeleton dynamics [goid 42808] [pmid 10721722] [evidence NAS]	MST016; LZAP; HSF-27; IC53; C53; OK/SW-cl.114	LZAP; HSF-27; OK/SW-cl.114; MST016; IC53; C53
Homo sapiens	RefSeq	NM_176096.1	ILMN_9170	CDK5RAP3	NM_176096.1	NM_176096.1		80279	28872791	NM_176096.1	CDK5RAP3	NP_788276.1	ILMN_3307950	0006620075	S	1634	TCTCCGCTTTTGGGATGAAGATGATAGCCAGGGCTGTTGTTTTGGGGCCC	17	+	43413896-43413945	17q21.32b	Homo sapiens CDK5 regulatory subunit associated protein 3 (CDK5RAP3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence ISS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10915792] [evidence NAS]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [pmid 10721722] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17785205] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with neuronal Cdc2-like kinase, an enzyme involved in the regulation of neuronal differentiation and neuro-cytoskeleton dynamics [goid 42808] [pmid 10721722] [evidence NAS]	MST016; LZAP; HSF-27; IC53; C53; OK/SW-cl.114	LZAP; HSF-27; OK/SW-cl.114; MST016; IC53; C53
Homo sapiens	RefSeq	NM_016275.3	ILMN_174944	SELT	NM_016275.3	NM_016275.3		51714	42789379	NM_016275.3	SELT	NP_057359.2	ILMN_1746368	0006380296	S	2993	GCCAGCAGGTTGGCTAATGCTATGGGGGTTTTTACCACAGTTGCCATTGT	3	+	150347737-150347786	3q25.1b	Homo sapiens selenoprotein T (SELT), mRNA.		Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [pmid 10567350] [evidence NAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [pmid 10567350] [evidence NAS]		
Homo sapiens	RefSeq	NM_016275.3	ILMN_174944	SELT	NM_016275.3	NM_016275.3		51714	42789379	NM_016275.3	SELT	NP_057359.2	ILMN_2227368	0001190202	S	3401	TTGAGAGAAACAAATGAGGATTGTAAAGTTTGGGGACTTACCTCTGTAGC	3	+	150348145-150348194	3q25.1b	Homo sapiens selenoprotein T (SELT), mRNA.		Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The incorporation of selenocysteine into a peptide; uses a special tRNA that recognizes the UGA codon as selenocysteine, rather than as a termination codon. Selenocysteine is synthesized from serine before its incorporation, it is not a posttranslational modification of peptidyl-cysteine [goid 1514] [pmid 10567350] [evidence NAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Interacting selectively with selenium (Se) [goid 8430] [pmid 10567350] [evidence NAS]		
Homo sapiens	RefSeq	NM_001063.2	ILMN_25028	TF	NM_001063.2	NM_001063.2		7018	21536430	NM_001063.2	TF	NP_001054.1	ILMN_1768425	0006590538	S	2119	TGGAAGCCTGCACTTTCCGTAGACCTTAAAATCTCAGAGGTAGGGCTGCC	3	+	134980126-134980154:134980155-134980175	3q22.1e	Homo sapiens transferrin (TF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [pmid 15292400] [evidence IDA]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [pmid 15229288] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]	Interacting selectively with ferric iron, Fe(III) [goid 8199] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PRO1557; PRO2086; DKFZp781D0156	PRO1557; PRO2086; DKFZp781D0156
Homo sapiens	RefSeq	NM_032421.2	ILMN_14847	CLIP2	NM_032421.2	NM_032421.2		7461	116008448	NM_032421.2	CLIP2	NP_115797.1	ILMN_2352190	0000730523	A	5264	AAGAAGCGGTTTCCTTGGGAGCTTCTGCCTCCGTGGGCCTCTCAGCCCGC	7	+	73458015-73458064	7q11.23b-q11.23c	Homo sapiens CAP-GLY domain containing linker protein 2 (CLIP2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 9799601] [evidence TAS]			CLIP-115; WSCR4; MGC11333; KIAA0291; CYLN2; WBSCR4; CLIP	CLIP-115; WSCR4; MGC11333; KIAA0291; CLIP2; WBSCR4; CLIP
Homo sapiens	RefSeq	NM_145178.2	ILMN_21023	ATOH7	NM_145178.2	NM_145178.2		220202	38327523	NM_145178.2	ATOH7	NP_660161.1	ILMN_2168228	0005690092	S	1106	GGATCTTGTGAATGGGTTGATTGCTGTGAAAATAATGCCCCCTTTCCCCT	10	-	69990700-69990749	10q21.3d	Homo sapiens atonal homolog 7 (Drosophila) (ATOH7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The synchronization of a circadian rhythm to environmental time cues such as light [goid 9649] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Math5	Math5
Homo sapiens	RefSeq	NM_145178.2	ILMN_21023	ATOH7	NM_145178.2	NM_145178.2		220202	38327523	NM_145178.2	ATOH7	NP_660161.1	ILMN_1752393	0004480047	S	830	AGCCAGAGACTCTTCGGCTTCCAGCCCGAGCCCTTCCAGATGGCCACCTA	10	-	69990976-69991025	10q21.3d	Homo sapiens atonal homolog 7 (Drosophila) (ATOH7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The synchronization of a circadian rhythm to environmental time cues such as light [goid 9649] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Math5	Math5
Homo sapiens	RefSeq	NM_078487.2	ILMN_183997	CDKN2B	NM_078487.2	NM_078487.2		1030	47132609	NM_078487.2	CDKN2B	NP_511042.1	ILMN_2376723	0000620487	A	3700	CCATTTTCGAAGCCACCTGGCAGACAGGTTTAGCTGTTTCATCAGCAGCC	9	-	22003136-22003185	9p21.3c	Homo sapiens cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) (CDKN2B), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9230210] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9230210] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16943770] [evidence IDA]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 8078588] [evidence IDA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 17553787] [evidence IMP]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 17553787] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [pmid 16943770] [evidence IMP]; Any cell cycle checkpoint that blocks entry into S phase [goid 31575] [pmid 17553787] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus [goid 31668] [pmid 17553787] [evidence IMP]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 31670] [pmid 17597576] [evidence IMP]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule [goid 42326] [pmid 8078588] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [pmid 16943770] [evidence IMP]	Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 9230210] [evidence NAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 8078588] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 8078588] [evidence IPI]	TP15; p15INK4b; INK4B; P15; MTS2; CDK4I	TP15; p15INK4b; INK4B; P15; MTS2; CDK4I
Homo sapiens	RefSeq	NM_194259.1	ILMN_27059	UBE2I	NM_194259.1	NM_194259.1		7329	35493986	NM_194259.1	UBE2I	NP_919235.1	ILMN_1664542	0003190445	I	295	GAAGTCATCGTGCCACCCAGAACCTGAGTGCGGGCCTCTCAGAGCTCCTT	16	+	1302506-1302555	16p13.3e	Homo sapiens ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) (UBE2I), transcript variant 2, mRNA.	A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [pmid 8610150] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9885291] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 8565643] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14516784] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12072434] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9885291] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12072434] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Interacting selectively with Helix Loop Helix, a domain of 40-50 residues that occurs in specific DNA-binding proteins that act as transcription factors. The domain is formed of two amphipathic helices joined by a variable length linker region that can form a loop and it mediates protein dimerization [goid 43398] [evidence IEA]	UBC9; P18; C358B7.1	UBC9; P18; C358B7.1
Homo sapiens	RefSeq	NM_014239.2	ILMN_21744	EIF2B2	NM_014239.2	NM_014239.2		8892	77404352	NM_014239.2	EIF2B2	NP_055054.1	ILMN_1713380	0003130079	S	1197	GAGTGTTGCTGCTGAAGCACATCCTTGCAATGTGGGAGTGCACAGGAGTC	14	+	74545703-74545752	14q24.3b	Homo sapiens eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa (EIF2B2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 15060152] [evidence IDA]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [pmid 15507143] [evidence IMP]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 15060152] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 15776425] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 12499492] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence ISS]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [pmid 15217090] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 14566705] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence ISS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 51716] [pmid 8626696] [evidence IDA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 16289705] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 11323413] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 15054402] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15060152] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11323413] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 11323413] [evidence IDA]	EIF-2Bbeta; EIF2B	EIF-2Bbeta; EIF2B
Homo sapiens	RefSeq	NM_001004326.1	ILMN_11851	FLJ16331	NM_001004326.1	NM_001004326.1		440044	51972231	NM_001004326.1	FLJ16331	NP_001004326.1	ILMN_2120507	0004640441	S	1216	TCAAAGCTGCCCCGGGAGCCGCAGGTTTGGTTCGCGCACGCCGGGACTTG	11	+	64749874-64749923	11q13.1c	Homo sapiens FLJ16331 protein (FLJ16331), mRNA.					
Homo sapiens	Unigene	Hs.579522	ILMN_131703	HS.579522	Hs.579522		Hs.579522		51651585	CR744191			ILMN_1865601	0004640706	S	77	GACCAGACCTGGACTCCCTGGGGCCACAGAGCTTCATCTGAACTAAGTAG	18	+	11444772-11444821		CR744191 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGp971M19101 ; IMAGE:2386310 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001133753.1	ILMN_173451	LOC727947	XM_001133753.1	XM_001133753.1		727947	113417283	XM_001133753.1	LOC727947	XP_001133753.1	ILMN_3280312	0001990722	M	171	TGACAGGATGTTTCACATGAAGAGGGCACTGGACCTGTCCATGAAGCATC				5q33.3d	PREDICTED: Homo sapiens hypothetical LOC727947 (LOC727947), mRNA.					
Homo sapiens	Unigene	Hs.566930	ILMN_119166	HS.566930	Hs.566930		Hs.566930		21982095	BQ773619			ILMN_1852526	0000240253	S	446	GCAGCCCATCTTATAACTCGAGGGGTTTCCTGAGCTTGGGGTTCCTCAGC	8	-	17956254-17956303		UI-H-EZ1-bbz-e-15-0-UI.s1 NCI_CGAP_Ch2 Homo sapiens cDNA clone UI-H-EZ1-bbz-e-15-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003236.1	ILMN_307525	TGFA	NM_001099691.1	NM_001099691.1		7039	153791413	NM_001099691.1	TGFA	NP_001093161.1	ILMN_1805175	0003420296	S	3691	ACCCCTGCCCTCTAGTTGGTTCTGGGCTTTGATCTCTTCCAACCTGCCCA	2	-	70674936-70674985	2p13.3c	Homo sapiens transforming growth factor, alpha (TGFA), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10918572] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 11278323] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10861448] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor activity [goid 45741] [pmid 11278323] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mitosis [goid 45840] [pmid 11278323] [evidence IDA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [pmid 11278323] [evidence IDA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]	Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 11278323] [evidence IDA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 10918572] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 2103501] [evidence TAS];  [goid 5155] [pmid 11278323] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 11278323] [evidence IDA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IEA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [evidence IEA]	TFGA	TFGA
Homo sapiens	RefSeq	NM_006942.1	ILMN_12152	SOX15	NM_006942.1	NM_006942.1		6665	5902105	NM_006942.1	SOX15	NP_008873.1	ILMN_1784217	0004120475	S	1247	CCAGCAGCATCCCCTACCCCAGGCTGTCAACCCTTTCTCCTGTTGGACTA	17	-	7491595-7491644	17p13.1d	Homo sapiens SRY (sex determining region Y)-box 15 (SOX15), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8332506] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [pmid 8332506] [evidence NAS]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [pmid 9540826] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The regrowth of muscle tissue to repair injured or damaged muscle fibers in the postnatal stage [goid 43403] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle development [goid 45843] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whose specific outcome is the progression of the myoblast over time, from its formation to the mature structure. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 48627] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8332506] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9540826] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SOX27; SOX26; SOX20	SOX27; SOX26; SOX20
Homo sapiens	RefSeq	NM_031299.3	ILMN_18763	CDCA3	NM_031299.3	NM_031299.3		83461	34147595	NM_031299.3	CDCA3	NP_112589.1	ILMN_1737728	0006370474	S	793	GGAAGGAGCCATTCTTGGAACTGGACGACTTCTGAAAACTGGAGGACGAG	12	-	6828529-6828578	12p13.31d	Homo sapiens cell division cycle associated 3 (CDCA3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	TOME-1; GRCC8; MGC2577	TOME-1; GRCC8; MGC2577
Homo sapiens	RefSeq	NM_001014291.1	ILMN_19621	SPRR2G	NM_001014291.2	NM_001014291.2		6706	83627725	NM_001014291.2	SPRR2G	NP_001014313.1	ILMN_1702127	0001470630	S	290	ATCCAGTGGCTCTTCTTACTCCCAGGACTCCATCATCTTCCCTTCAGCTG	1	-	151388896-151388945	1q21.3c	Homo sapiens small proline-rich protein 2G (SPRR2G), mRNA.	An insoluble protein structure formed under the plasma membrane of cornifying epithelial cells [goid 1533] [pmid 8325635] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 8325635] [evidence NAS]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [pmid 8325635] [evidence NAS]; The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Homo sapiens	Unigene	Hs.496187	ILMN_96834	HS.496187	Hs.496187		Hs.496187		7281861	AW594636			ILMN_1842602	0004730273	S	152	GAATGCTTATATCCAACTCCGTTGACTTCTTACTCCACCCACTTATtgtg	X	-	56166186-56166235		hg62b12.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2950175 3, mRNA sequence					
Homo sapiens	RefSeq	XM_927547.1	ILMN_29122	ZNF138	NM_006524.1	NM_006524.1		7697	37537515	NM_006524.1	ZNF138	NP_006515.1	ILMN_1676240	0000360370	S	1571	AAATGTGAACAGTGTGGCAAGGTCTTTAAGAAGTCCTCAACTCTTACTGC	7	+	63930481-63930530	7q11.21c	Homo sapiens zinc finger protein 138 (ZNF138), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7557990] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7557990] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	pHZ-32	
Homo sapiens	RefSeq	NM_006524.1	ILMN_29122	ZNF138	NM_006524.1	NM_006524.1		7697	37537515	NM_006524.1	ZNF138	NP_006515.1	ILMN_1704358	0000270066	S	1388	GGGGAGAAACCCCACAAATGTGGAGAATGCGGAAAAGCCTTTAACTGGTC	7	+	63930298-63930347	7q11.21c	Homo sapiens zinc finger protein 138 (ZNF138), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7557990] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7557990] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	pHZ-32	pHZ-32
Homo sapiens	RefSeq	NM_130794.1	ILMN_19036	CST11	NM_080830.2	NM_080830.2		140880	18644731	NM_080830.2	CST11	NP_543020.2	ILMN_1697370	0006400068	A	148	GGCAGTAGAAAACTATGCGAAGGACAGCTTGCAGTGGATCACCGACCAGT	20	-	23433285-23433334	20p11.21c	Homo sapiens cystatin 11 (CST11), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	 [goid 4869] [evidence IEA]	SC13; dJ322G13.6; CST8L	SC13; dJ322G13.6; CST8L
Homo sapiens	RefSeq	XM_944516.1	ILMN_42965	LOC651122	XM_944516.1	XM_944516.1		651122	89037851	XM_944516.1	LOC651122	XP_949609.1	ILMN_1666193	0006220468	S	181	CTGCTCCCGCGCCACCTTAGCGCGCGTGACGGGACCTGTCAAGAGCCCCA					PREDICTED: Homo sapiens hypothetical protein LOC651122 (LOC651122), mRNA.					
Homo sapiens	RefSeq	NM_001011554.1	ILMN_180748	SLC13A3	NM_001011554.1	NM_001011554.1		64849	58761540	NM_001011554.1	SLC13A3	NP_001011554.1	ILMN_1796243	0005390594	I	93	AAAGGAAGCTACATATGGGTGGTCCCTGCTACACCAGCCTCCCAAGCCTC	20	-	45298709-45298758	20q13.12c	Homo sapiens solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 (SLC13A3), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 15362] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In high affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations [goid 15362] [evidence IEA]	SDCT2; NADC3	SDCT2; NADC3
Homo sapiens	RefSeq	NM_001032385.1	ILMN_25211	PQBP1	NM_001032385.1	NM_001032385.1		10084	74027258	NM_001032385.1	PQBP1	NP_001027557.1	ILMN_1711596	0000450315	A	594	CGACAAGTCTGACAGGGATCGAGAGCGTGGCTATGACAAGCAGTAAGCCG	X	+	48644566-48644605:48644953-48644958:48644959-48644962	Xp11.23c	Homo sapiens polyglutamine binding protein 1 (PQBP1), transcript variant 6, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10198427] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10198427] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9875212] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10198427] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NPW38; RENS1; SHS; MRXS3; MRXS8; MRX55	NPW38; RENS1; SHS; MRXS3; MRXS8; MRX55
Homo sapiens	RefSeq	NM_018277.1	ILMN_5943	C21ORF77	NM_018277.1	NM_018277.1		55264	8922778	NM_018277.1	C21orf77	NP_060747.1	ILMN_1807686	0000050280	S	1254	CGTTCAACCTGATGAGTTCACTGCTTCTTCCCCAAACATTGCAGAGCTGC	21	-	32868759-32868808	21q22.11b	Homo sapiens chromosome 21 open reading frame 77 (C21orf77), mRNA.				FLJ10932	FLJ10932
Homo sapiens	RefSeq	XR_038523.1	ILMN_337952	LOC728686	XR_038523.1	XR_038523.1		728686	169172350	XR_038523.1	LOC728686		ILMN_3222586	0001450470	A	900	CTTGACCGTCAGTAGCAGAGAGGGCAGCAGAAGCCTAATTCCCAAATTCT				8p23.3b	PREDICTED: Homo sapiens misc_RNA (LOC728686), miscRNA.					
Homo sapiens	RefSeq	XR_038523.1	ILMN_337952	LOC728686	XR_038523.1	XR_038523.1		728686	169172350	XR_038523.1	LOC728686		ILMN_3299134	0002900392	M	794	CACCGACAATGAAGGAGAGTGACCTGAGCAAGTAGTAGTGGGGTAAATGG				8p23.3b	PREDICTED: Homo sapiens misc_RNA (LOC728686), miscRNA.					
Homo sapiens	RefSeq	NM_005940.3	ILMN_16214	MMP11	NM_005940.3	NM_005940.3		4320	58331147	NM_005940.3	MMP11	NP_005931.2	ILMN_1655915	0002370632	S	1959	CAGGTCTTGGTAGGTGCCTGCATCTGTCTGCCTTCTGGCTGACAATCCTG	22	+	22456201-22456250	22q11.23a	Homo sapiens matrix metallopeptidase 11 (stromelysin 3) (MMP11), mRNA.	A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 1701851] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1701851] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7746327] [evidence TAS]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 7746327] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ST3; SL-3; STMY3	ST3; SL-3; STMY3
Homo sapiens	RefSeq	NR_024382.1	ILMN_370773	LOC645233	NR_024382.1	NR_024382.1		645233	211971055	NR_024382.1	LOC645233		ILMN_3240721	0003170040	S	112	GCGGAGAACGCGGGCAGCTACTCCCTTCAGCAAGCTCAAGCTTTTTATAC				12p12.1a	Homo sapiens thymine-DNA glycosylase pseudogene (LOC645233), non-coding RNA.					
Homo sapiens	RefSeq	XR_038789.1	ILMN_350883	LOC338870	XR_038789.1	XR_038789.1		338870	169206028	XR_038789.1	LOC338870		ILMN_3294074	0001170441	M	132	GGGCCAAGCCCATCTTTATGTGCTTGCATCCAACTGTGATGAGACTGTGT				13q12.11b	PREDICTED: Homo sapiens misc_RNA (LOC338870), miscRNA.					
Homo sapiens	RefSeq	NM_003729.1	ILMN_11697	RTCD1	NM_003729.2	NM_003729.2		8634	141802708	NM_003729.2	RTCD1	NP_003720.1	ILMN_1808305	0005420326	S	1032	GGTGGTACTGTGGATGAGTATCTGCAAGACCAGCTGATTGTTTTCATGGC	1	+	100523435-100523466:100525243-100525260	1p21.2a	Homo sapiens RNA terminal phosphate cyclase domain 1 (RTCD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9184239] [evidence TAS]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9184239] [evidence TAS]; Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate [goid 3963] [pmid 9184239] [evidence TAS]	RPC	RPC
Homo sapiens	RefSeq	NM_003244.2	ILMN_9308	TGIF1	NM_003244.2	NM_003244.2		7050	28178841	NM_003244.2	TGIF1	NP_003235.1	ILMN_1702211	0004210196	I	94	CTGCCAGAAGATCCCGGCGGGAGGAAGCCCAAGTGTCACTTGAATTCCAC	18	+	3440265-3440314	18p11.31e	Homo sapiens TGFB-induced factor homeobox 1 (TGIF1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10764806] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8537382] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8537382] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10764806] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HPE4; MGC5066; MGC39747; TGIF	HPE4; MGC5066; MGC39747; TGIF
Homo sapiens	RefSeq	NM_006072.4	ILMN_6946	CCL26	NM_006072.4	NM_006072.4		10344	51944958	NM_006072.4	CCL26	NP_006063.1	ILMN_1659601	0004280301	S	196	TCCAAGACCTGCTGCTTCCAATACAGCCACAAGCCCCTTCCCTGGACCTG	7	-	75401257-75401306	7q11.23e	Homo sapiens chemokine (C-C motif) ligand 26 (CCL26), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10373330] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 10373330] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10373330] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10373330] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10373330] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10373330] [evidence TAS]	MIP-4alpha; TSC-1; MGC126714; IMAC; SCYA26; MIP-4a	MIP-4alpha; TSC-1; MGC126714; IMAC; SCYA26; MIP-4a
Homo sapiens	RefSeq	XM_001717855.1	ILMN_335449	LOC100130692	XM_001717855.1	XM_001717855.1		100130692	169214977	XM_001717855.1	LOC100130692	XP_001717907.1	ILMN_3177104	0004850397	A	1730	ACGGGCTCGCAGGAACAAATGACTTTCCTATTGCCAGAGGCAGGCTGGTC				20p12.1d	PREDICTED: Homo sapiens hypothetical LOC100130692 (LOC100130692), mRNA.					
Homo sapiens	RefSeq	NM_002493.3	ILMN_9342	NDUFB6	NM_002493.3	NM_002493.3		4712	33519470	NM_002493.3	NDUFB6	NP_002484.1	ILMN_2369924	0006450050	A	213	CTCGGGAGCCGGTGCTGCCCCCACAGAAGATGGGGCCTATGGAGAAATTC	9	-	32572920-32572969	9p21.1a	Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa (NDUFB6), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 17209039] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	MGC13675; B17; CI	MGC13675; B17; CI
Homo sapiens	RefSeq	NM_002493.3	ILMN_9342	NDUFB6	NM_002493.3	NM_002493.3		4712	33519470	NM_002493.3	NDUFB6	NP_002484.1	ILMN_1763147	0001010768	A	165	AGCTGCGAGAGCTGAGAAGGCGATGGCTGAAGGACCAGGAGCTGAGCCCT	9	-	32572968-32573017	9p21.1a	Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa (NDUFB6), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 17209039] [evidence IDA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	MGC13675; B17; CI	MGC13675; B17; CI
Homo sapiens	RefSeq	NM_005583.3	ILMN_18317	LYL1	NM_005583.3	NM_005583.3		4066	34147557	NM_005583.3	LYL1	NP_005574.2	ILMN_2216582	0003190288	S	1442	CTTCCCAGGGGCGAGGTCGGCAAAGCAACATGGCAGAGCAGTCATAGGAA	19	-	13074680-13074681:13209847-13209894	19p13.13b	Homo sapiens lymphoblastic leukemia derived sequence 1 (LYL1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2752424] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	NR_024617.1	ILMN_371012	PART1	NR_024617.1	NR_024617.1		25859	218931207	NR_024617.1	PART1		ILMN_3307854	0004050110	S	2155	GGGGAGACACTACAAGGTATAGTAAAGGGGTCAGATGCGGTGTCTCATGC	5	+	59843144-59843193	5q12.1a	Homo sapiens prostate androgen-regulated transcript 1 (non-protein coding) (PART1), transcript variant 1, non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_003269.2	ILMN_183120	NR2E1	NM_003269.2	NM_003269.2		7101	21361108	NM_003269.2	NR2E1	NP_003260.1	ILMN_2094294	0001340376	S	2837	CCATTGCTAACAGCCTGAGACTCTTCAATGCCTTTCCGAAAACTGGTTTC	6	+	108616331-108616380	6q21e	Homo sapiens nuclear receptor subfamily 2, group E, member 1 (NR2E1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9628820] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The orderly movement of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system [goid 8347] [evidence IEA]; The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex [goid 21772] [evidence IEA]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum [goid 21960] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IEA]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The orderly movement of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system [goid 8347] [evidence IEA]; The progression of the olfactory bulb over time from its initial formation until its mature state. The olfactory bulb coordinates neuronal signaling involved in the perception of smell. It receives input from the sensory neurons and outputs to the olfactory cortex [goid 21772] [evidence IEA]; Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in one half of the cerebral cortex towards target cells in the contralateral half. This axonal process is a member of those that make up the anterior commissure, a small midline fiber tract that lies at the anterior end of the corpus callosum [goid 21960] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IEA]; Behavior that occurs predominantly, or only, in individuals that are part of a group [goid 35176] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [pmid 9628820] [evidence TAS]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TLX; TLL; XTLL	TLX; TLL; XTLL
Homo sapiens	RefSeq	XM_001715430.1	ILMN_336722	LOC100128104	XM_001715430.1	XM_001715430.1		100128104	169209139	XM_001715430.1	LOC100128104	XP_001715482.1	ILMN_3178585	0005340075	A	559	GTGTGGGACTGAAGTTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTAACT				15q26.1a	PREDICTED: Homo sapiens hypothetical protein LOC100128104 (LOC100128104), mRNA.					
Homo sapiens	RefSeq	XM_936659.1	ILMN_39954	LOC439945	XM_936659.1	XM_936659.1		439945	89031696	XM_936659.1	LOC439945	XP_941752.1	ILMN_1701515	0004040431	A	267	CATGTGCCCCACCAGGCCAGCTCCCCCAGACTCAGAGGGCAGCAGTAACA				10p15.3d	PREDICTED: Homo sapiens similar to Interleukin-9 receptor precursor (IL-9R) (CD129 antigen) (LOC439945), mRNA.					
Homo sapiens	RefSeq	NM_198581.1	ILMN_25490	ZC3H6	NM_198581.2	NM_198581.2		376940	118766346	NM_198581.2	ZC3H6	NP_940983.2	ILMN_1660852	0004780041	S	5449	GCAGTTCTGTGCTAAAATGGGGTTGTGGTTAAGTGAACGAGAACTCTGCC	2	+	112808021-112808070	2q13d	Homo sapiens zinc finger CCCH-type containing 6 (ZC3H6), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ16526; FLJ41410; FLJ45877; ZC3HDC6; KIAA2035	FLJ16526; FLJ41410; FLJ45877; ZC3HDC6; KIAA2035
Homo sapiens	RefSeq	XM_930269.1	ILMN_31195	LOC647225	XM_930269.1	XM_930269.1		647225	88943666	XM_930269.1	LOC647225	XP_935362.1	ILMN_1698832	0003940474	S	121	CCACGCCAGGCCGGCCTGGCCCTGAGCCCACAGAGAGCAGCCTCCCCCAG	1	+	199858756-199858805		PREDICTED: Homo sapiens hypothetical protein LOC647225 (LOC647225), mRNA.					
Homo sapiens	RefSeq	NR_024567.1	ILMN_371293	LOC100130557	NR_024567.1	NR_024567.1		100130557	217272836	NR_024567.1	LOC100130557		ILMN_3244693	0001570390	S	3050	GACACAAGAGCAGCATGTCCTAAATAGAGCTCCCTCTTCAGCTTTGGTCC	1	-	41154834-41154883	1p34.2c	Homo sapiens hypothetical LOC100130557 (LOC100130557), non-coding RNA.					
Homo sapiens	RefSeq	NM_130465.3	ILMN_29860	TSPAN17	NM_130465.3	NM_130465.3		26262	54859580	NM_130465.3	TSPAN17	NP_569732.2	ILMN_2374383	0000840403	A	2439	CTGCCGGGTGGCCAGGGTATGGGGCATGTGCCCAGCAATGTGGCTCCTTG	5	+	176018525-176018574	5q35.2d	Homo sapiens tetraspanin 17 (TSPAN17), transcript variant 2, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FBX23; MGC14859; TM4SF17; MGC71255; FBXO23	FBX23; MGC14859; TM4SF17; MGC71255; FBXO23
Homo sapiens	RefSeq	NM_005731.2	ILMN_1434	ARPC2	NM_005731.2	NM_005731.2		10109	23238209	NM_005731.2	ARPC2	NP_005722.1	ILMN_1792489	0007160327	A	993	GAGGAAGCGGCTGGCAACTGAAGGCTGGAACACTTGCTACTGGATAATCG	2	+	218826899-218826948	2q35e	Homo sapiens actin related protein 2/3 complex, subunit 2, 34kDa (ARPC2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [pmid 9230079] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9230079] [evidence TAS]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9230079] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17350576] [evidence IPI]	ARC34; PRO2446; PNAS-139; p34-Arc	ARC34; PRO2446; PNAS-139; p34-Arc
Homo sapiens	RefSeq	NM_005731.2	ILMN_1434	ARPC2	NM_005731.2	NM_005731.2		10109	23238209	NM_005731.2	ARPC2	NP_005722.1	ILMN_1810200	0007560162	I	9	GTCCTTGCCTCCCTTACCCACCCTCACCGGCCCTTGTTTCTCCTTCCCCT	2	+	218790373-218790422	2q35e	Homo sapiens actin related protein 2/3 complex, subunit 2, 34kDa (ARPC2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [pmid 9230079] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9230079] [evidence TAS]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9230079] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17350576] [evidence IPI]	ARC34; PRO2446; PNAS-139; p34-Arc	ARC34; PRO2446; PNAS-139; p34-Arc
Homo sapiens	RefSeq	NM_198514.2	ILMN_23260	NHLRC2	NM_198514.2	NM_198514.2		374354	42476012	NM_198514.2	NHLRC2	NP_940916.2	ILMN_1698715	0004480674	S	2405	GCTAGCAACCCATTGCCACCACCTACTGTCTCCCATCCTGACTATCACTG	10	+	115644042-115644091	10q25.3a	Homo sapiens NHL repeat containing 2 (NHLRC2), mRNA.		Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		FLJ20147; FLJ33312; MGC45492; FLJ25621; DKFZp779F115	FLJ33312; DKFZp779F115; FLJ20147; MGC45492; FLJ25621
Homo sapiens	RefSeq	NM_015897.2	ILMN_17822	PIAS4	NM_015897.2	NM_015897.2		51588	24850132	NM_015897.2	PIAS4	NP_056981.2	ILMN_1802905	0001470315	S	1659	TTTCCACCCTTTTGCCTGGCTCCTGGCACCTGTACCTCTGGACTCTCCTA	19	+	3988989-3989038	19p13.3e	Homo sapiens protein inhibitor of activated STAT, 4 (PIAS4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11248056] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9724754] [evidence NAS]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11248056] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 9724754] [evidence NAS]; The process by which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxyl terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein [goid 16925] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11388671] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11388671] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9724754] [evidence NAS]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal glycine residues of the small ubiquitin-related modifier SUMO and a substrate lysine residue, leading to the formation of predominately monosumoylated proteins with modified function [goid 19789] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC35296; ZMIZ6; Piasg; FLJ12419; PIASY	MGC35296; ZMIZ6; Piasg; FLJ12419; PIASY
Homo sapiens	RefSeq	NM_138700.2	ILMN_2471	TRIM40	NM_138700.2	NM_138700.2		135644	33469990	NM_138700.2	TRIM40	NP_619645.1	ILMN_1653591	0001190408	S	758	CAGCTGGAGCACATGCCAGCAGAAGCGGCCAGAATCCTTGACATCTCCAG	6	+	30222840-30222889	6p21.33b	Homo sapiens tripartite motif-containing 40 (TRIM40), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF35	RNF35
Homo sapiens	RefSeq	NM_006800.2	ILMN_3457	MSL3	NM_006800.2	NM_006800.2		10943	17975760	NM_006800.2	MSL3	NP_006791.2	ILMN_1788196	0001770669	I	27	CGGCTGTCGGTCTAAAAGAGGAGAGAATGCTTTCTTTAAAAAAGGGTCTG	X	+	11687708-11687757	Xp22.2	Homo sapiens male-specific lethal 3 homolog (Drosophila) (MSL3), transcript variant 3, mRNA.				DKFZP586J1822	DKFZP586J1822
Homo sapiens	RefSeq	NM_001693.2	ILMN_42002	ATP6V1B2	NM_001693.3	NM_001693.3		526	87159809	NM_001693.3	ATP6V1B2	NP_001684.2	ILMN_1787705	0006650017	S	2782	TCCTGCGCCTTCCTGACGTGAGCCCTGAGCGATCTTCTATGCAGTTCTGC	8	+	20078945-20078994	8p21.3c	Homo sapiens ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 (ATP6V1B2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6754] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport [goid 15988] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out); by a phosphorylative mechanism [goid 8553] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [pmid 2145275] [evidence TAS]	VATB; VPP3; ATP6B2; ATP6B1B2; Vma2; HO57	VATB; VPP3; ATP6B2; ATP6B1B2; Vma2; HO57
Homo sapiens	RefSeq	NM_017509.2	ILMN_25189	KLK15	NM_017509.2	NM_017509.2		55554	20302142	NM_017509.2	KLK15	NP_059979.2	ILMN_2260715	0003140681	I	559	GGACACATCTTGTGACAAGAGCTACCCAGGGCGCCTGACAAACACCATGG	19	-	56021729-56021778	19q13.33c	Homo sapiens kallikrein-related peptidase 15 (KLK15), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11010966] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	HSRNASPH; ACO	HSRNASPH; ACO
Homo sapiens	RefSeq	NM_017509.2	ILMN_25189	KLK15	NM_017509.2	NM_017509.2		55554	20302142	NM_017509.2	KLK15	NP_059979.2	ILMN_2347097	0004200445	A	1070	ACACTGTTCCTTTTCACCCACCACCCCGATCCCTAGGTGAGGAGAAGCGG	19	-	56020546-56020595	19q13.33c	Homo sapiens kallikrein-related peptidase 15 (KLK15), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11010966] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	HSRNASPH; ACO	HSRNASPH; ACO
Homo sapiens	RefSeq	XR_019452.2	ILMN_182692	LOC651861	XR_019452.2	XR_019452.2		651861	169218241	XR_019452.2	LOC651861		ILMN_3278421	0001580180	M	908	ACCTGGAGGACTTCGAAGAGGCCGCATCACTGGAAGCACCCCGCAGCTAG					PREDICTED: Homo sapiens hypothetical LOC651861 (LOC651861), mRNA.					
Homo sapiens	RefSeq	XM_940483.1	ILMN_40615	LOC648816	XM_940483.1	XM_940483.1		648816	88980397	XM_940483.1	LOC648816	XP_945576.1	ILMN_1728308	0003710128	S	2500	CCTGCTTTCTCTGCCTATATACTAAGTAATCCACATGAGATAGTCCCATG					PREDICTED: Homo sapiens hypothetical protein LOC648816 (LOC648816), mRNA.					
Homo sapiens	RefSeq	NM_181358.1	ILMN_18422	HIPK1	NM_181358.1	NM_181358.1		204851	38201643	NM_181358.1	HIPK1	NP_852003.1	ILMN_1690951	0002710189	I	2	GATTGTTTCACATCACCAGTGTATCCTCAGCTCCTAACACTGTGTCTGGT	1	+	114298023-114298072	1p13.2b	Homo sapiens homeodomain interacting protein kinase 1 (HIPK1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12702766] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12529400] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC33446; KIAA0630; Nbak2; MGC26642; MGC33548; Myak	MGC33446; KIAA0630; Nbak2; MGC26642; MGC33548; Myak
Homo sapiens	RefSeq	NM_001003810.1	ILMN_17559	HNRNPD	NM_002138.3	NM_002138.3		3184	51477710	NM_002138.3	HNRNPD	NP_002129.2	ILMN_1751368	0004180576	A	1168	GGTGACCAGCAGAGTGGTTATGGGAAGGTATCCAGGCGAGGTGGTCATCA	4	-	83495532-83495578:83496973-83496975	4q21.22a	Homo sapiens heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) (HNRNPD), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1433497] [evidence NAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [evidence NAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1433497] [evidence NAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 10205060] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 6401] [pmid 10205060] [evidence TAS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 3754960] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12674497] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16556936] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12674497] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12107167] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12674497] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16556936] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16902409] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12674497] [evidence IPI]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 1433497] [evidence NAS]	P37; AUF1; hnRNPD0; AUF1A	P37; AUF1; hnRNPD0; AUF1A
Homo sapiens	RefSeq	NM_022054.2	ILMN_17624	KCNK13	NM_022054.2	NM_022054.2		56659	16306554	NM_022054.2	KCNK13	NP_071337.2	ILMN_1659352	0000990112	S	2104	GGGGAGAATGTTTGGGGATGTGTCTGGGCTTTCTTTTTGCCAGGCTTCCT	14	+	89721535-89721584	14q32.11a	Homo sapiens potassium channel, subfamily K, member 13 (KCNK13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	THIK-1; THIK1; K2p13.1	THIK-1; THIK1; K2p13.1
Homo sapiens	RefSeq	NM_206890.1	ILMN_26238	DIP2A	NM_206890.1	NM_206890.1		23181	45827695	NM_206890.1	DIP2A	NP_996773.1	ILMN_2277523	0002490685	I	2714	CCTTCATTTGCAGCTCGGGAAGTCTTTGTGCAGTAGATGGAAAGCCCAGC	21	+	46791420-46791469	21q22.3f	Homo sapiens DIP2 disco-interacting protein 2 homolog A (Drosophila) (DIP2A), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	DIP2; C21orf106	DIP2; C21orf106
Homo sapiens	RefSeq	NM_206889.1	ILMN_26238	DIP2A	NM_206890.1	NM_206890.1		23181	45827695	NM_206890.1	DIP2A	NP_996773.1	ILMN_1778662	0005390338	A	2460	GTGTTTGAGGCAGTTCCGGTCACCACAGGAGGAGCACCCATCTTTGACAG	21	+	46789606-46789614:46790222-46790262	21q22.3f	Homo sapiens DIP2 disco-interacting protein 2 homolog A (Drosophila) (DIP2A), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	DIP2; C21orf106	DIP2; C21orf106
Homo sapiens	RefSeq	NM_002469.1	ILMN_163267	MYF6	NM_002469.1	NM_002469.1		4618	4505298	NM_002469.1	MYF6	NP_002460.1	ILMN_1805802	0002120615	S	757	GCGTGGAGGAAGTGGTGGAGAAGTAACTGAGCCTGCGCTTGAGACCTTCT	12	+	79626845-79626870:79626871-79626894	12q21.31a	Homo sapiens myogenic factor 6 (herculin) (MYF6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2311584] [evidence TAS]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 2311584] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [pmid 2311584] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2311584] [evidence TAS]	HERCULIN; MRF4	HERCULIN; MRF4
Homo sapiens	RefSeq	NM_002469.1	ILMN_163267	MYF6	NM_002469.1	NM_002469.1		4618	4505298	NM_002469.1	MYF6	NP_002460.1	ILMN_2157717	0005720497	S	946	TGCGAAATCTGTTGTGCACGCTCAAATGAAAACGCCTTTCGGCTTTGGGC	12	+	79627034-79627083	12q21.31a	Homo sapiens myogenic factor 6 (herculin) (MYF6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2311584] [evidence TAS]	The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 2311584] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [pmid 2311584] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2311584] [evidence TAS]	HERCULIN; MRF4	HERCULIN; MRF4
Homo sapiens	RefSeq	NM_173077.1	ILMN_12653	CPO	NM_173077.1	NM_173077.1		130749	27436870	NM_173077.1	CPO	NP_775100.1	ILMN_1746086	0006760592	S	593	ACTGCCAAGATCAAACATTCTGTGGGACAGGGCCAGTGTCTGAACCAGAG	2	+	207535399-207535448	2q33.3c	Homo sapiens carboxypeptidase O (CPO), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC138281; MGC138283	MGC138281; MGC138283
Homo sapiens	Unigene	Hs.569154	ILMN_121335	HS.569154	Hs.569154		Hs.569154		11591771	BF508473			ILMN_1897279	0002640056	S	161	CAAAGCTTCTGTGCTTTATTGATTGCCAGGGAGACTCGGGGGCTTTTGCA	12	-	15196248-15196265:15198441-15198472		UI-H-BI4-aqd-b-02-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3089235 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001110.2	ILMN_169204	ADAM10	NM_001110.2	NM_001110.2		102	73747882	NM_001110.2	ADAM10	NP_001101.1	ILMN_1718946	0005290300	S	3287	GAATGGTGGTATTCAGTGGTCCAGGATTCTGTAATGCTTTACACAGGCAG	15	-	58889100-58889149	15q22.1b	Homo sapiens ADAM metallopeptidase domain 10 (ADAM10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12475894] [evidence IDA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [pmid 12475894] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12475894] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8694785] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 12714508] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 8694785] [evidence NAS]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence ISS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 8694785] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 12714508] [evidence NAS]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain that occurs constantly, regardless of environmental conditions or demands [goid 51089] [pmid 12714508] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 8694785] [evidence NAS]; Interacting selectively with an integrin [goid 5178] [pmid 8694785] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CD156c; HsT18717; kuz; MADM	CD156c; HsT18717; kuz; MADM
Homo sapiens	RefSeq	NM_001110.2	ILMN_169204	ADAM10	NM_001110.2	NM_001110.2		102	73747882	NM_001110.2	ADAM10	NP_001101.1	ILMN_2148360	0003130364	S	3466	CTGGACATAGCAGCACATACTACTTCAGAGTTCATGATGTAGATGTCTGG	15	-	58888921-58888970	15q22.1b	Homo sapiens ADAM metallopeptidase domain 10 (ADAM10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12475894] [evidence IDA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [pmid 12475894] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12475894] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8694785] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 12714508] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 8694785] [evidence NAS]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence ISS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 8694785] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 12714508] [evidence NAS]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain that occurs constantly, regardless of environmental conditions or demands [goid 51089] [pmid 12714508] [evidence IDA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 8694785] [evidence NAS]; Interacting selectively with an integrin [goid 5178] [pmid 8694785] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CD156c; HsT18717; kuz; MADM	CD156c; HsT18717; kuz; MADM
Homo sapiens	RefSeq	XM_001722549.1	ILMN_346629	LOC100128186	XM_001722549.1	XM_001722549.1		100128186	169166923	XM_001722549.1	LOC100128186	XP_001722601.1	ILMN_3266399	0004200681	M	350	GAGCTGCAGGGGAGGACCTGGAGATCTGGTACAGGCAGCCTTTTGTGTGT				4q32.3c	PREDICTED: Homo sapiens hypothetical protein LOC100128186 (LOC100128186), mRNA.					
Homo sapiens	Unigene	Hs.439031	ILMN_92108	HS.439031	Hs.439031		Hs.439031		27842321	BX095318			ILMN_1880113	0002070445	S	560	ACGCAGGCACACGTGAATGACAGACTCCTCTGTGGTGGCCTAGACTCCAG	2	-	8733356-8733405		BX095318 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998D161782, mRNA sequence					
Homo sapiens	RefSeq	XR_015857.2	ILMN_179102	FLJ43681	XR_015857.2	XR_015857.2		388574	169211139	XR_015857.2	FLJ43681		ILMN_3235148	0000830768	S	196	CCCCACGAGAAACAAGCTTGGCCACTATGCTATCATCAAGTTTCCGCTGG	17	-	8936-8985		PREDICTED: Homo sapiens similar to 60S ribosomal protein L23a (FLJ43681), miscRNA.					
Homo sapiens	RefSeq	NM_013269.2	ILMN_15059	CLEC2D	NM_013269.3	NM_013269.3		29121	112382217	NM_013269.3	CLEC2D	NP_037401.1	ILMN_1711702	0005490341	A	987	CTTGAGACAAGAACAGTATGGGGCTCCCTGGTGTGATTCCGTCCTGCGCG	12	+	9739126-9739175	12p13.31a	Homo sapiens C-type lectin domain family 2, member D (CLEC2D), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10541800] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10541800] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10541800] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 10541800] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLAX; OCIL; LLT1	CLAX; OCIL; LLT1
Homo sapiens	RefSeq	NM_013269.3	ILMN_15059	CLEC2D	NM_013269.3	NM_013269.3		29121	112382217	NM_013269.3	CLEC2D	NP_037401.1	ILMN_3250023	0006760148	A	4778	CTGCAAGCCCAGTAGACTTTGTCCCAGGCCATTTATGTGATCTTCACCCC	12	+	9742917-9742966	12p13.31a	Homo sapiens C-type lectin domain family 2, member D (CLEC2D), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10541800] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10541800] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10541800] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 10541800] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLAX; OCIL; LLT1	CLAX; OCIL; LLT1
Homo sapiens	RefSeq	NM_199185.1	ILMN_15059	CLEC2D	NM_013269.3	NM_013269.3		29121	112382217	NM_013269.3	CLEC2D	NP_037401.1	ILMN_1678775	0004590717	A	2076	GTTGTCCAGGTTCTATTGCCAAGAATGTGTTGTCCAAAATGCCTGTTTAG	12	+	9740215-9740264	12p13.31a	Homo sapiens C-type lectin domain family 2, member D (CLEC2D), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10541800] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10541800] [evidence TAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10541800] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 10541800] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	CLAX; OCIL; LLT1	NPM; B23
Homo sapiens	RefSeq	NM_023003.1	ILMN_25681	TM6SF1	NM_023003.2	NM_023003.2		53346	141803413	NM_023003.2	TM6SF1	NP_075379.1	ILMN_1750961	0000240653	S	960	GGAGGTCTGGCTCAGGCTCAGTTTTCTCACATTGGTGCATCTCTTCATGC	15	+	81587219-81587233:81596237-81596271	15q25.2b	Homo sapiens transmembrane 6 superfamily member 1 (TM6SF1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	Unigene	Hs.24119	ILMN_71879	HS.24119	Hs.24119		Hs.24119		34191712	BC043003			ILMN_1869897	0005690341	S	1020	GGCGACCAGTTTCTCACAGAATTGTGAAGCCTGAAGGCCAAGAGGAAGTC	1	+	196556712-196556761		Homo sapiens cDNA clone IMAGE:5297467					
Homo sapiens	RefSeq	NM_012149.2	ILMN_29115	DUX5	NM_012149.2	NM_012149.2		26581	63985969	NM_012149.2	DUX5	NP_036281.2	ILMN_2115813	0007550367	S	447	TGCCAGGGAAGAGCTGGCCAGAGAGACGGGCCTCCCGGAGTCCAGGATTC					Homo sapiens double homeobox, 5 (DUX5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_152250.1	ILMN_162358	DEFB105A	NM_152250.1	NM_152250.1		245908	22748616	NM_152250.1	DEFB105A	NP_689463.1	ILMN_1722505	0006450576	S	27	TTTTCTATTTGCTATGTTCTTCATTTTGGTTCAACTGCCATCAGGGTGCC	8	-	7718349-7718355:7718701-7718743	8p23.1e	Homo sapiens defensin, beta 105A (DEFB105A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		DEFB-5; BD-5; DEFB105	DEFB-5; BD-5; DEFB105
Homo sapiens	RefSeq	NM_145025.2	ILMN_14365	C6ORF199	NM_145025.3	NM_145025.3		221264	142356159	NM_145025.3	C6orf199	NP_659462.1	ILMN_1755111	0001190017	S	2123	GCCCACTGAGTTACCGCAAAATGAACCCCCATGTAACCACCAACCAGGTC	6	-	110059982-110060031	6q21f	Homo sapiens chromosome 6 open reading frame 199 (C6orf199), mRNA.		The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]	dJ70A9.1; MGC26954; RP1-70A9.1	dJ70A9.1; MGC26954; RP1-70A9.1
Homo sapiens	Unigene	Hs.540678	ILMN_105292	HS.540678	Hs.540678		Hs.540678		6074566	AW103831			ILMN_1905197	0002970037	S	148	GGCACATCTCAACTTGCACAGGCCACATGTCAAGGGCTCCAAAGCCACCT	16	+	3187474-3187523		xd76b05.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2603505 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006186.2	ILMN_28405	NR4A2	NM_006186.2	NM_006186.2		4929	27894347	NM_006186.2	NR4A2	NP_006177.1	ILMN_2339955	0000650639	A	2994	TCCTGACAAAAGGGACACATAGTGTTTGTAACACCGTCCAACATTCCTTG	2	-	156889590-156889639	2q24.1c	Homo sapiens nuclear receptor subfamily 4, group A, member 2 (NR4A2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7877627] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7877627] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNR1; NOT; TINUR; NURR1; HZF-3	RNR1; NOT; TINUR; NURR1; HZF-3
Homo sapiens	RefSeq	NM_006186.2	ILMN_28405	NR4A2	NM_006186.2	NM_006186.2		4929	27894347	NM_006186.2	NR4A2	NP_006177.1	ILMN_1782305	0006400364	A	2648	GTTGCGTGGGTGGCATGAGTTGAAGAAGGCAAAGGCTTGTAAATTTACCC	2	-	156889936-156889985	2q24.1c	Homo sapiens nuclear receptor subfamily 4, group A, member 2 (NR4A2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7877627] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7877627] [evidence NAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNR1; NOT; TINUR; NURR1; HZF-3	RNR1; NOT; TINUR; NURR1; HZF-3
Homo sapiens	Unigene	Hs.333643	ILMN_86439	HS.333643	Hs.333643		Hs.333643		2594531	AA658377			ILMN_1845778	0000150601	S	144	GCAGTGCAGCTGGGATTTGAACTCCACAGTCAGTCTTCAGAGTCAGGGAC	6	-	131060419-131060468		nu22f12.s1 NCI_CGAP_Pr2 Homo sapiens cDNA clone IMAGE:1208783, mRNA sequence					
Homo sapiens	RefSeq	XR_016073.2	ILMN_170447	LOC732160	XR_016073.2	XR_016073.2		732160	169164942	XR_016073.2	LOC732160		ILMN_3240326	0001260181	S	1	ATGACTCTAGCTGATGTTGGGACCCTTTGCTGTCACCCCGCAGTCCCCAC					PREDICTED: Homo sapiens similar to mitochondrial complex I subunit NDUFA10 (LOC732160), mRNA.					
Homo sapiens	RefSeq	NM_001023564.1	ILMN_11648	CTSL3	NM_001023564.2	NM_001023564.2		392360	116642874	NM_001023564.2	CTSL3	NP_001018858.2	ILMN_1726198	0004290554	S	567	GCAGATGCTAAGTGGTGGGGATGAGGATCACGATGAAGACAAATGGCCCC	9	+	89591529-89591578	9q21.33c	Homo sapiens cathepsin L family member 3 (CTSL3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	HCTSL-s	
Homo sapiens	Unigene	Hs.126245	ILMN_76241	HS.126245	Hs.126245		Hs.126245		51650628	CR743148			ILMN_1901616	0006370082	S	354	GGGCCGAGATGGTTTGTCTTATGCCTATAGCTGTTTATGTCCCACCAGTG	4	-	90378056-90378105		CR743148 NCI_CGAP_GC4 Homo sapiens cDNA clone IMAGp971L0563 ; IMAGE:1550800 5, mRNA sequence					
Homo sapiens	RefSeq	XM_946149.1	ILMN_137861	LLGL2	XM_946149.1	XM_946149.1		3993	89042946	XM_946149.1	LLGL2	XP_951242.1	ILMN_1707283	0005700040	I	117	GTTGCCCAGCTCCACCCGACTCCCACGCTAAGGGTCAGACACCCAAACAT				17q25.1c	PREDICTED: Homo sapiens lethal giant larvae homolog 2 (Drosophila), transcript variant 6 (LLGL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]			
Homo sapiens	RefSeq	NM_001040432.1	ILMN_177758	ZCWPW2	NM_001040432.1	NM_001040432.1		152098	94536775	NM_001040432.1	ZCWPW2	NP_001035522.1	ILMN_2054461	0000130192	S	1065	GCCCAGAAGCTCCTGCAGGCAGTCTGTTTGAAAACCACTATGAAGAGGAC	3	+	28454864-28454891:28476601-28476622	3p24.1c	Homo sapiens zinc finger, CW type with PWWP domain 2 (ZCWPW2), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZCW2	ZCW2
Homo sapiens	RefSeq	NM_012353.1	ILMN_175425	OR1C1	NM_012353.2	NM_012353.2		26188	115529470	NM_012353.2	OR1C1	NP_036485.2	ILMN_1813390	0002850615	S	754	TACGGCACAGCCATCGCCGTCTATTTCAGCCCTTCATCCCCCCATATGCC	1	-	247920905-247920954	1q44e	Homo sapiens olfactory receptor, family 1, subfamily C, member 1 (OR1C1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9119360] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 9119360] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 9119360] [evidence NAS]	HSTPCR27; TPCR27; OR1-42	HSTPCR27; TPCR27; OR1-42
Homo sapiens	Unigene	Hs.188369	ILMN_80953	HS.188369	Hs.188369		Hs.188369		29126794	BC047939			ILMN_1833008	0003460524	S	2690	CTGCATGAGTGGCAACCACCAACATGTGAACTGAGAGGAAAAGGAGGTAG	14	-	70005549-70005598		Homo sapiens, clone IMAGE:5170866, mRNA					
Homo sapiens	RefSeq	XM_372498.3	ILMN_39861	LOC390427	XM_372498.3	XM_372498.3		390427	89036861	XM_372498.3	LOC390427	XP_372498.3	ILMN_1656636	0001710762	S	43	AGGCTTCGGGAGGTCCACTCGGGGGATCAGCAGGAGACCCAGAATCCACA	13	-	114007916-114007965	13q34d	PREDICTED: Homo sapiens similar to TBP-associated factor 15 isoform 1 (LOC390427), mRNA.					
Homo sapiens	RefSeq	NM_138720.1	ILMN_17622	HIST1H2BD	NM_138720.1	NM_138720.1		3017	20336751	NM_138720.1	HIST1H2BD	NP_619790.1	ILMN_1651496	0000290730	I	541	TGTGGATCCCACCCAAATCCAACTCATCCTGGTTTGCTGCACACTGGTTC	6	+	26171304-26171353	6p22.1d	Homo sapiens histone cluster 1, H2bd (HIST1H2BD), transcript variant 2, mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2B.1B; HIRIP2; MGC90432; dJ221C16.6; H2B/b; H2BFB	H2B.1B; HIRIP2; MGC90432; dJ221C16.6; H2B/b; H2BFB
Homo sapiens	RefSeq	NM_138720.1	ILMN_17622	HIST1H2BD	NM_138720.1	NM_138720.1		3017	20336751	NM_138720.1	HIST1H2BD	NP_619790.1	ILMN_1758623	0006200669	A	36	CTATTAACGCTACGATGCCTGAACCTACCAAGTCTGCTCCTGCCCCAAAG	6	+	26158384-26158397:26158398-26158433	6p22.1d	Homo sapiens histone cluster 1, H2bd (HIST1H2BD), transcript variant 2, mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	H2B.1B; HIRIP2; MGC90432; dJ221C16.6; H2B/b; H2BFB	H2B.1B; HIRIP2; MGC90432; dJ221C16.6; H2B/b; H2BFB
Homo sapiens	RefSeq	NM_153207.3	ILMN_28948	AEBP2	NM_153207.3	NM_153207.3		121536	49472839	NM_153207.3	AEBP2	NP_694939.1	ILMN_1803376	0004260671	S	3964	TAATGTCTGCCCATCTGTATTGTTGCTCCTACCTTCAAATATGACACCTG	12	+	19564769-19564818	12p12.3a	Homo sapiens AE binding protein 2 (AEBP2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC17922	MGC17922
Homo sapiens	Unigene	Hs.160568	ILMN_79701	HS.160568	Hs.160568		Hs.160568		7038967	AW468861			ILMN_1895518	0004490326	S	110	GTTGAAGCCTGACAGAAATCAGCTGTGCTCCTCTCCAGTTTGATGGCCCC	4	+	65772357-65772406		hd29b03.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2910893 3, mRNA sequence					
Homo sapiens	RefSeq	NR_002718.2	ILMN_4083	TDGF3	NR_002718.2	NR_002718.2		6998	93004111	NR_002718.2	TDGF3		ILMN_2060635	0003520019	S	2293	AGGGCAAGTTTCCATCATCTATAGAAAGCTATGTAAGACAAGGACTCCCC	X	+	109652488-109652537	Xq22.3d	Homo sapiens teratocarcinoma-derived growth factor 3, pseudogene (TDGF3), non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Process by which a cell becomes capable of differentiating autonomously into a mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 7500] [evidence NAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 1882841] [evidence NAS]	TDGF1; TDGF2; CRIPTO-3; CR-3; CRIPTO	TDGF1; TDGF2; CRIPTO-3; CR-3; CRIPTO
Homo sapiens	RefSeq	XM_001719495.1	ILMN_342079	LOC100132515	XM_001719495.1	XM_001719495.1		100132515	169210069	XM_001719495.1	LOC100132515	XP_001719547.1	ILMN_3241296	0001010113	S	118	AGAACTTCCCACGTCGAGACTGGGTGAGGGGCTCAGCCATCCGGCATCTC	16	-	67237399-67237448	16q22.1c	PREDICTED: Homo sapiens similar to hCG2045429 (LOC100132515), mRNA.					
Homo sapiens	RefSeq	XR_019551.2	ILMN_168633	LOC391044	XR_019551.2	XR_019551.2		391044	169161598	XR_019551.2	LOC391044		ILMN_3291437	0004220240	M	483	GGTCTCCAGGCAGGTGAGCGACAACCTTACGGAGTGAGCAGCCACCTTTA				1p32.1e	PREDICTED: Homo sapiens misc_RNA (LOC391044), miscRNA.					
Homo sapiens	RefSeq	NM_001722.2	ILMN_4403	POLR3D	NM_001722.2	NM_001722.2		661	55769551	NM_001722.2	POLR3D	NP_001713.2	ILMN_1685109	0002030189	S	1471	GCGTGGAGATGGCACATCCTTGCTGCTGGGGACTTGGCCCTGCTATTTAT	8	+	22108222-22108271	8p21.3a	Homo sapiens polymerase (RNA) III (DNA directed) polypeptide D, 44kDa (POLR3D), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; RNA polymerase III, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces 5S rRNA, tRNAs and some of the small nuclear RNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase I and others of which are also found in RNA polymerases I and II. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5666] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase III (Pol III), originating at a Pol III-specific promoter [goid 6383] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	RPC53; BN51T; TSBN51; RPC4	RPC53; BN51T; TSBN51; RPC4
Homo sapiens	RefSeq	NM_198330.1	ILMN_172569	INPP5F	NR_003252.1	NR_003252.1		22876	117190489	NR_003252.1	INPP5F		ILMN_1813650	0007650445	I	40	GGGGGGAGGGTTGACATTTTCCGACTGCCTGTTACGTGCCAAGTGCTTTT	10	+	121568815-121568864	10q26.11d	Homo sapiens inositol polyphosphate-5-phosphatase F (INPP5F), transcript variant 2, non-coding RNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	SAC2; hSAC2; FLJ13081; MGC59773; MSTPO47; MSTP007; KIAA0966; MGC131851	hSAC2; SAC2; FLJ13081; MGC59773; MSTPO47; KIAA0966; MSTP007; MGC131851
Homo sapiens	RefSeq	NM_152902.3	ILMN_13476	TIPRL	NM_152902.3	NM_152902.3		261726	73088904	NM_152902.3	TIPRL	NP_690866.1	ILMN_2249288	0004670468	I	2740	TTTTAACTTGTTGATTCAGATGTCTTGGTCCCTGAATAGTCCTAGATTAC	1	+	166437684-166437733	1q24.2a	Homo sapiens TIP41, TOR signaling pathway regulator-like (S. cerevisiae) (TIPRL), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	RP1-69E11.1; MGC3794; dJ69E11.3; TIP; TIP41	RP1-69E11.1; MGC3794; dJ69E11.3; TIP; TIP41
Homo sapiens	RefSeq	NM_001031800.1	ILMN_13476	TIPRL	NM_152902.3	NM_152902.3		261726	73088904	NM_152902.3	TIPRL	NP_690866.1	ILMN_1781457	0002810040	A	397	AGTGGCCTGTGCTGAAGAGTGGCAAGAAAGCAGGACGGAGGGTGAACACT	1	+	166419911-166419943:166420641-166420657	1q24.2a	Homo sapiens TIP41, TOR signaling pathway regulator-like (S. cerevisiae) (TIPRL), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	RP1-69E11.1; MGC3794; dJ69E11.3; TIP; TIP41	RP1-69E11.1; MGC3794; dJ69E11.3; TIP; TIP41
Homo sapiens	RefSeq	NM_152902.3	ILMN_13476	TIPRL	NM_152902.3	NM_152902.3		261726	73088904	NM_152902.3	TIPRL	NP_690866.1	ILMN_2249282	0006040129	I	2406	TCTGCCTTCTGTATCACCTCCAAGCTATAGGAAATCAGGATTTTGTTGGC	1	+	166437350-166437399	1q24.2a	Homo sapiens TIP41, TOR signaling pathway regulator-like (S. cerevisiae) (TIPRL), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	RP1-69E11.1; MGC3794; dJ69E11.3; TIP; TIP41	RP1-69E11.1; MGC3794; dJ69E11.3; TIP; TIP41
Homo sapiens	RefSeq	NM_003829.1	ILMN_8353	MPDZ	NM_003829.3	NM_003829.3		8777	148746188	NM_003829.3	MPDZ	NP_003820.2	ILMN_1707649	0005270326	S	6201	CCCAACCCCTAGCTCACCTCCTACTGTAAAGAGAATGCACTGGTCCTGAC	9	-	13166171-13166220	9p23a	Homo sapiens multiple PDZ domain protein (MPDZ), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16192269] [evidence IPI]	FLJ25909; DKFZp781P216; FLJ34626; MUPP1; FLJ90240	FLJ25909; FLJ34626; MUPP1; FLJ90240; DKFZp781P216
Homo sapiens	RefSeq	XM_934138.1	ILMN_36213	KIAA0748	XM_934138.1	XM_934138.1		9840	89035529	XM_934138.1	KIAA0748	XP_939231.1	ILMN_1690139	0003830471	A	1955	GCATGGTACATCTCACACTAGGATTCCCTCTGCACCTCTGTTCATCCCTG	12	-	53629924-53629973	12q13.2a	PREDICTED: Homo sapiens KIAA0748 gene product, transcript variant 2 (KIAA0748), mRNA.					
Homo sapiens	RefSeq	NM_002409.3	ILMN_20796	MGAT3	NM_002409.4	NM_002409.4		4248	148539887	NM_002409.4	MGAT3	NP_002400.3	ILMN_1766475	0001580008	S	2077	TATGACTGCCAAGACTGCTGTGGCCAGGAGGTGCCACTGGAGTGTGCGTG	22	+	38215136-38215185	22q13.1d	Homo sapiens mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (MGAT3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8370666] [evidence TAS]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R [goid 3830] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R [goid 3830] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R [goid 3830] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	FLJ43371; GNT-III; GNT3; MGC142278; MGC141943	GNT-III; MGC141943; GNT3; MGC142278
Homo sapiens	RefSeq	Hs.276808	ILMN_20796	MGAT3	NM_002409.4	NM_002409.4		4248	148539887	NM_002409.4	MGAT3	NP_002400.3	ILMN_1853824	0006420500	S	4874	TGGGGAGACGGGACTTGTCCAAGCAGAAGGCAGGACCCTGGGAAATGCAT	22	+	38217933-38217982	22q13.1d	Homo sapiens mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (MGAT3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8370666] [evidence TAS]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [evidence IEA]	Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R [goid 3830] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R [goid 3830] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-mannosyl-R = UDP + 4-(N-acetyl-beta-D-glucosaminyl)-beta-D-mannosyl-R [goid 3830] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	FLJ43371; GNT-III; GNT3; MGC142278; MGC141943	
Homo sapiens	RefSeq	NM_178566.2	ILMN_16147	ZDHHC21	NM_178566.2	NM_178566.2		340481	31341670	NM_178566.2	ZDHHC21	NP_848661.1	ILMN_1715526	0004150474	S	3048	CAGGCACAAGGGTTTGGATTTTGTGCAAGCTAATTTGGCCACATTTGGCC	9	-	14607136-14607185	9p22.3c	Homo sapiens zinc finger, DHHC-type containing 21 (ZDHHC21), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_939597.1	ILMN_46343	LOC645811	XM_939597.2	XM_939597.2		645811	113426269	XM_939597.2	LOC645811	XP_944690.2	ILMN_1682595	0006420653	S	1067	TGCAGCAGAACCAGGCGTCGCTGAACCGCGTCCTACTGGCCGAGGAGAAA				16p13.3e	PREDICTED: Homo sapiens similar to ciliary rootlet coiled-coil, rootletin (LOC645811), mRNA.					
Homo sapiens	Unigene	Hs.580126	ILMN_132307	HS.580126	Hs.580126		Hs.580126		9509565	BE463790			ILMN_1897557	0002070021	S	157	GGGGTCTTCTTTCCTTCCTGAAGGTCCAGGCTTCCATGTGGAATAATTTC					hy17g11.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:3197636 3 similar to contains L1.t2 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NR_024280.1	ILMN_369860	LOC100129066	NR_024280.1	NR_024280.1		100129066	210147403	NR_024280.1	LOC100129066		ILMN_3235051	0004540086	S	2040	ACTGCCCAACACGTCAATGAGTGATCCTGCAGAGCCTCCCATCTCCTAGC	9	+	92334520-92334569	9q22.2a	Homo sapiens hypothetical LOC100129066 (LOC100129066), non-coding RNA. XM_001721230 XM_001722014 XM_001722017 XM_001723592 XM_001723595					
Homo sapiens	RefSeq	XM_942452.1	ILMN_45670	LOC652792	XM_942452.1	XM_942452.1		652792	89077529	XM_942452.1	LOC652792	XP_947545.1	ILMN_1792550	0001940014	S	414	CTCCAATAAGCCTGTATGCGTGAGTGGAAATTATCTGGCCCTGCTGGAAG					PREDICTED: Homo sapiens similar to hydrocephalus inducing (LOC652792), mRNA.					
Homo sapiens	RefSeq	XM_931833.1	ILMN_33432	DDX12	XM_931833.1	XM_931833.1		440081	89035304	XM_931833.1	DDX12	XP_936926.1	ILMN_1783253	0000610370	I	2152	CCGCCGGGCTGCTTTTTCCTTGGATGCCCATCAGGACGCCTCAGTTCTCT	12	-	9472902-9472951	12p13.31a	PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 4 (DDX12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]		
Homo sapiens	RefSeq	XM_001714863.1	ILMN_334705	LOC100133779	XM_001714863.1	XM_001714863.1		100133779	169216267	XM_001714863.1	LOC100133779	XP_001714915.1	ILMN_3235462	0000150537	S	76	CCCGGGACTCCCATGGTGCTTTCGAGAAGGGGTTATTCACAATATAAACA					PREDICTED: Homo sapiens similar to mitochondrial ribosomal protein S18C (LOC100133779), mRNA.					
Homo sapiens	RefSeq	XM_060417.2	ILMN_41488	LOC127295	XM_060417.3	XM_060417.3		127295	113404836	XM_060417.3	LOC127295	XP_060417.3	ILMN_1744347	0000540451	S	2	TGGCTCTGCGCTACCCTATGGCCATGGGCCTCAACAAGGGCCACAAGGTG	1	-	24207545-24207594	1p36.11d	PREDICTED: Homo sapiens similar to 60S ribosomal protein L36 (LOC127295), mRNA.					
Homo sapiens	RefSeq	NM_133633.1	ILMN_10387	SYN3	NM_133633.1	NM_133633.1		8224	19924108	NM_133633.1	SYN3	NP_598344.1	ILMN_1756694	0007150044	A	2292	GGGCTCCTGTACCCATTCTGTTCCACCACTGTTTGATCTCTCTGGCCTCC	22	-	31238824-31238873	22q12.3a	Homo sapiens synapsin III (SYN3), transcript variant IIIc, mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [pmid 9539796] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [pmid 9539796] [evidence TAS]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]; The regulated release of neurotransmitter into the synaptic cleft. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma-aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin [goid 7269] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_004299.3	ILMN_11983	ABCB7	NM_004299.3	NM_004299.3		22	42490748	NM_004299.3	ABCB7	NP_004290.2	ILMN_1687840	0005700286	S	2140	GTGGCATACACAGAGCAGCCGTGTGCAGAACCATGATAACCCCAAATGGG	X	-	74280132-74280165:74282163-74282178	Xq13.3a	Homo sapiens ATP-binding cassette, sub-family B (MDR/TAP), member 7 (ABCB7), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 10196363] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9621516] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9621516] [evidence TAS]; Enables the directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of, within or between cells [goid 15232] [pmid 9621516] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 9621516] [evidence TAS]	EST140535; Atm1p; ASAT; ABC7	EST140535; Atm1p; ASAT; ABC7
Homo sapiens	RefSeq	NM_001014449.1	ILMN_22514	DDX19B	NM_001014449.1	NM_001014449.1		11269	62241021	NM_001014449.1	DDX19B	NP_001014449.1	ILMN_2330584	0004560242	A	425	CTTAATTGCCCAATCTCAGTCTGGTACTGGTAAAACAGCTGCCTTCGTGC	16	+	68915998-68916047	16q22.1f	Homo sapiens DEAD (Asp-Glu-Ala-As) box polypeptide 19B (DDX19B), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 10428971] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10428971] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 10428971] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10428971] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DDX19; DBP5; RNAh	DDX19; DBP5; RNAh
Homo sapiens	Unigene	Hs.423336	ILMN_90660	HS.423336	Hs.423336		Hs.423336		17066445	AJ420581			ILMN_1829362	0006940747	S	1568	ccccaaccccctcccccTACACACACAGCTTATTTTGGGAAACTGCCCCT	6	+	83964989-83965038		Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 1690427					
Homo sapiens	RefSeq	NM_013363.2	ILMN_14782	PCOLCE2	NM_013363.2	NM_013363.2		26577	16904386	NM_013363.2	PCOLCE2	NP_037495.1	ILMN_1746888	0004810445	S	1637	CAGAGGAGCAGCTATCTGATTGGAAACCTGCCGACTTAGTGCGGTGATAG	3	-	144019624-144019673	3q23d	Homo sapiens procollagen C-endopeptidase enhancer 2 (PCOLCE2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]	PCPE2	PCPE2
Homo sapiens	RefSeq	NM_001004054.2	ILMN_20098	POTE2	NM_001004054.2	NM_001004054.2		445582	52856431	NM_001004054.2	POTE2	NP_001004054.2	ILMN_1810689	0006900619	A	1	GGTAGACGCGATCTGTTCGCTACTACTGGCTTCTCCTGGCTGTTAAAAGC	2	+	131692394-131692443	2q21.1d	Homo sapiens protein expressed in prostate, ovary, testis, and placenta 2 (POTE2), transcript variant POTE-2C, mRNA.					
Homo sapiens	RefSeq	NM_000033.2	ILMN_8117	ABCD1	NM_000033.2	NM_000033.2		215	7262392	NM_000033.2	ABCD1	NP_000024.2	ILMN_1772189	0004890609	S	3272	TCCCTATTCGTAGCCATCTCCGTGGCCAATGTGACTACCGTGCCAGCAGC	X	+	152663031-152663080	Xq28f	Homo sapiens ATP-binding cassette, sub-family D (ALD), member 1 (ABCD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 8441467] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [pmid 8441467] [evidence NAS]; The directed movement of substances to, from or across the peroxisomal membrane [goid 15919] [pmid 8441467] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8441467] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 8441467] [evidence NAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 10551832] [evidence IPI]	ALD; AMN; ALDP; ABC42	ALD; AMN; ALDP; ABC42
Homo sapiens	RefSeq	XM_934955.1	ILMN_39169	LOC645070	XM_934955.1	XM_934955.1		645070	88998816	XM_934955.1	LOC645070	XP_940048.1	ILMN_1723094	0003120039	I	2790	CCACCCACACAGCAGGTGGCCTCTCCGATTCCAGTCCCATCATTAGGGAA	6	+	46573-46622		PREDICTED: Homo sapiens similar to AT rich interactive domain 1B (SWI1-like) isoform 1, transcript variant 2 (LOC645070), mRNA.					
Homo sapiens	RefSeq	NM_001302.3	ILMN_17270	CORT	NM_001302.3	NM_001302.3		1325	56121821	NM_001302.3	CORT	NP_001293.2	ILMN_2071186	0002650241	S	275	AGCAGGGTGGGAGAGAAGCTCCAGTCAGCCCACAAGATGCCATTGTCCCC	1	+	10432832-10432881	1p36.22c	Homo sapiens cortistatin (CORT), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9125122] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [pmid 9125122] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9125122] [evidence TAS]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [pmid 12915402] [evidence IPI]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 9125122] [evidence TAS]	CST-14; CST-29; CST-17	CST-14; CST-29; CST-17
Homo sapiens	RefSeq	NM_001001696.1	ILMN_14522	FLJ44006	NM_001001696.1	NM_001001696.1		400997	48717398	NM_001001696.1	FLJ44006	NP_001001696.1	ILMN_1709900	0005690754	S	2917	CTAGGCAGGTATTATGGACAAGCTTGGCAAATCCACAGCCCATGGGCCAC	2	-	111572452-111572501	2q13c	Homo sapiens FLJ44006 protein (FLJ44006), mRNA.					
Homo sapiens	RefSeq	NM_207299.1	ILMN_25642	LPPR1	NM_207299.1	NM_207299.1		54886	46877065	NM_207299.1	LPPR1	NP_997182.1	ILMN_1780576	0004050598	I	246	AATGCAGCAGCGCCTGGAGAGCGTGTCTCGGACCGCCGCCTGAATGTACC	9	+	102831097-102831146	9q31.1a-q31.1b	Homo sapiens lipid phosphate phosphatase-related protein type 1 (LPPR1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	RP11-35N6.1; MGC26189	MGC26189; RP11-35N6.1
Homo sapiens	RefSeq	NM_182489.1	ILMN_21845	STRA8	NM_182489.1	NM_182489.1		346673	32698789	NM_182489.1	STRA8	NP_872295.1	ILMN_1721689	0002100133	S	720	CACGCCCGAGGAGATCCTTTTTGAGGATGCCTTTGATGTGGCAAGCTTCC	7	+	134581982-134581994:134587088-134587124	7q33b	Homo sapiens stimulated by retinoic acid gene 8 homolog (mouse) (STRA8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]			
Homo sapiens	RefSeq	NM_001631.2	ILMN_163024	ALPI	NM_001631.2	NM_001631.2		248	13787191	NM_001631.2	ALPI	NP_001622.1	ILMN_1752669	0002570162	S	2308	CTTCCTGCCCCCCAGTGCCCATTCCAGGTCACCAGATCCAAGGAGCGCTT	2	+	233032776-233032825	2q37.1c	Homo sapiens alkaline phosphatase, intestinal (ALPI), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence NAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum [goid 4035] [pmid 2841341] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	IAP	IAP
Homo sapiens	Unigene	Hs.12764	ILMN_71284	HS.12764	Hs.12764		Hs.12764		34194544	BC040862			ILMN_1844128	0000050020	S	723	GGTGACTGGTGGGGAGAAGGATGAGGGAATTCAGGGGATTGCTGAGCCCA	12	+	125411201-125411250		Homo sapiens cDNA clone IMAGE:5541046, partial cds					
Homo sapiens	Unigene	Hs.233356	ILMN_82838	HS.233356	Hs.233356		Hs.233356		19592550	BM974959			ILMN_1909871	0002640746	S	622	GGCTAGGACAGTAAACAACAACCTGGACATGACGCCCGGATTATCAGCCC	1	+	42970234-42970283		UI-CF-EC1-acd-h-12-0-UI.s1 UI-CF-EC1 Homo sapiens cDNA clone UI-CF-EC1-acd-h-12-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.571151	ILMN_123332	HS.571151	Hs.571151		Hs.571151		10722614	AV705309			ILMN_1881081	0007210333	S	51	GCTGTAAATAGCTCTGCAGGCCAAGGTAGCCATAGTAAGAAGTCCTGGAG	6	+	26335216-26335265		AV705309 ADB Homo sapiens cDNA clone ADBBWE05 5, mRNA sequence					
Homo sapiens	RefSeq	NR_000030.1	ILMN_1017	LOC134997	NR_000030.1	NR_000030.1		134997	22546003	NR_000030.1	LOC134997		ILMN_2205211	0000870537	S	305	GACTTCACACGCCATAATGGCACTGGTGGCAAGTCACCACTGGGAGAAAT	6	+	25084888-25084937	6p22.2b	Homo sapiens peptidylprolyl isomerase A processed pseudogene (LOC134997) on chromosome 6.					
Homo sapiens	RefSeq	NM_174858.1	ILMN_14377	AK5	NM_174858.1	NM_174858.1		26289	28144896	NM_174858.1	AK5	NP_777283.1	ILMN_1656593	0002680220	I	253	CAGCCATGAACACCAACGATGCCAAGGAGTATCTGGCCCGGAGGGAAATC	1	+	77520582-77520586:77520587-77520631	1p31.1f-p31.1e	Homo sapiens adenylate kinase 5 (AK5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10215863] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10215863] [evidence TAS]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The chemical reactions and pathways resulting in the formation of ADP, adenosine 5'-diphosphate [goid 6172] [pmid 10215863] [evidence TAS]; The chemical reactions and pathways resulting in the formation of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate) [goid 6173] [pmid 10215863] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 9220] [pmid 10215863] [evidence TAS]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [pmid 10215863] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate [goid 19206] [pmid 10215863] [evidence EXP]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate [goid 19205] [evidence IEA]	AK6; MGC33326	AK6; MGC33326
Homo sapiens	RefSeq	NM_004536.2	ILMN_174418	NAIP	NM_004536.2	NM_004536.2		4671	119393877	NM_004536.2	NAIP	NP_004527.2	ILMN_2260082	0005390427	I	1033	TGGTGCCGGCCTCACGAGACTCCCCATAGAAGACCACAAGAGGTTTCATC	5	-	70344134-70344183	5q13.2b	Homo sapiens NLR family, apoptosis inhibitory protein (NAIP), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 8552191] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 7813013] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	FLJ42520; psiNAIP; BIRC1; NLRB1	BIRC1; NLRB1; FLJ42520; psiNAIP
Homo sapiens	RefSeq	XM_936944.1	ILMN_174418	NAIP	NM_004536.2	NM_004536.2		4671	119393877	NM_004536.2	NAIP	NP_004527.2	ILMN_1760189	0005340240	A	1034	GGTGCCGGCCTCACGAGACTCCCCATAGAAGACCACAAGAGGTTTCATCC	5	-	70344133-70344182	5q13.2b	Homo sapiens NLR family, apoptosis inhibitory protein (NAIP), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 8552191] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 7813013] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	FLJ42520; psiNAIP; BIRC1; NLRB1	
Homo sapiens	RefSeq	NM_004536.1	ILMN_174418	NAIP	NM_004536.2	NM_004536.2		4671	119393877	NM_004536.2	NAIP	NP_004527.2	ILMN_1684378	0000840543	I	509	CCCCGGGTATTGACCCCAGACAACAATGCCACTTCATATTGGGGACTTCG	5	-	70355931-70355980	5q13.2b	Homo sapiens NLR family, apoptosis inhibitory protein (NAIP), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 8552191] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 7813013] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	FLJ42520; psiNAIP; BIRC1; NLRB1	NAIP; psiNAIP
Homo sapiens	RefSeq	NM_004536.2	ILMN_174418	NAIP	NM_004536.2	NM_004536.2		4671	119393877	NM_004536.2	NAIP	NP_004527.2	ILMN_2345812	0003060288	A	527	GACAACAATGCCACTTCATATTGGGGACTTCGTCTGGGATTCCAAGGTGC	5	-	70355913-70355962	5q13.2b	Homo sapiens NLR family, apoptosis inhibitory protein (NAIP), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 8552191] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 7813013] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	FLJ42520; psiNAIP; BIRC1; NLRB1	BIRC1; NLRB1; FLJ42520; psiNAIP
Homo sapiens	RefSeq	NM_020109.3	ILMN_1057	ACRV1	NM_020109.3	NM_020109.3		56	34328918	NM_020109.3	ACRV1	NP_064494.1	ILMN_2320277	0005550075	A	880	TCCCCAGTCAACAACTGACCACATCTGCCTCTGCCTGAGCATTAGGATGC	11	-	125542356-125542405	11q24.2b	Homo sapiens acrosomal vesicle protein 1 (ACRV1), transcript variant 5, mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1693291] [evidence TAS]		SP-10; D11S4365; SPACA2	SP-10; D11S4365; SPACA2
Homo sapiens	RefSeq	XM_001725108.1	ILMN_338510	LOC729173	XM_001725108.1	XM_001725108.1		729173	169203070	XM_001725108.1	LOC729173	XP_001725160.1	ILMN_3299424	0001660427	M	1806	GACGGGAGGATCACATGAGGCCAGGAATTCAAGACCAGCCTGAGTAACAT				11q23.3g	PREDICTED: Homo sapiens hypothetical protein LOC729173 (LOC729173), mRNA.					
Homo sapiens	RefSeq	XM_001126719.2	ILMN_168693	LOC728157	XM_001126719.2	XM_001126719.2		728157	169217340	XM_001126719.2	LOC728157	XP_001126719.2	ILMN_3281988	0006020634	M	237	GGCACAATCTGGGCTCACTGCAACCTCTGCCTGCTCGGTTCAAGCAATTC	Y	+	11790043-11790092	Yq11.1b	PREDICTED: Homo sapiens hypothetical LOC728157 (LOC728157), mRNA.					
Homo sapiens	RefSeq	NM_152755.1	ILMN_15383	CNPY4	NM_152755.1	NM_152755.1		245812	22749478	NM_152755.1	CNPY4	NP_689968.1	ILMN_2252408	0006200743	I	1279	ATCCAGGAGGCTACACACCAGCAAACCGTGAAGGAGAATGGGACACTGGG	7	+	99560876-99560925	7q22.1c	Homo sapiens canopy 4 homolog (zebrafish) (CNPY4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC40499; PRAT4B	MGC40499; PRAT4B
Homo sapiens	RefSeq	XM_941945.1	ILMN_15383	CNPY4	NM_152755.1	NM_152755.1		245812	22749478	NM_152755.1	CNPY4	NP_689968.1	ILMN_1758487	0002570014	A	519	TGGAGCTTTGGGATGAGCCCAGCGTGGAGGTCACATACCTCAAGAAGCAG	7	+	99558416-99558465	7q22.1c	Homo sapiens canopy 4 homolog (zebrafish) (CNPY4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC40499; PRAT4B	
Homo sapiens	RefSeq	NM_152755.1	ILMN_15383	CNPY4	NM_152755.1	NM_152755.1		245812	22749478	NM_152755.1	CNPY4	NP_689968.1	ILMN_1777314	0001090255	A	518	CTGGAGCTTTGGGATGAGCCCAGCGTGGAGGTCACATACCTCAAGAAGCA	7	+	99558415-99558464	7q22.1c	Homo sapiens canopy 4 homolog (zebrafish) (CNPY4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC40499; PRAT4B	MGC40499; PRAT4B
Homo sapiens	RefSeq	NM_006674.2	ILMN_15231	HCP5	NM_006674.2	NM_006674.2		10866	47087196	NM_006674.2	HCP5	NP_006665.2	ILMN_1803945	0000780600	S	2341	CCAAAGCCTCTAGTGTACCTTCCTCCTCTTACTCATCCATCCCAGTCAAC	6	+	31541369-31541418	6p21.33a	Homo sapiens HLA complex P5 (HCP5), mRNA.				P5-1; D6S2650E	P5-1; D6S2650E
Homo sapiens	RefSeq	XR_042329.1	ILMN_352578	LOC729081	XR_042329.1	XR_042329.1		729081	169188832	XR_042329.1	LOC729081		ILMN_3229909	0005700736	A	356	GCTGAGGCCAAGGGGGCAGTCTCCCCTAATAAGTTCTCTCTCAAGAAGTC	10	+	104925518-104925567	10q24.33a	PREDICTED: Homo sapiens misc_RNA (LOC729081), miscRNA.					
Homo sapiens	Unigene	Hs.544484	ILMN_107886	HS.544484	Hs.544484		Hs.544484		5664411	AI928447			ILMN_1898040	0004860246	S	276	CCACAGCCCAGAAGTGGAAAGTTAGAGTGAACAAAGGGACCATGAACTCG	6	+	109817575-109817624		wp02a06.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2463634 3, mRNA sequence					
Homo sapiens	RefSeq	NM_153425.1	ILMN_433	TRADD	NM_153425.1	NM_153425.1		8717	24234725	NM_153425.1	TRADD	NP_700474.1	ILMN_1806800	0007000504	I	289	TTCTTCCCGAGCAGTGGGAGTCGCGCTTGGTGGAGGCCGAAGACCTGAGA	16	-	65747421-65747470	16q22.1a	Homo sapiens TNFRSF1A-associated via death domain (TRADD), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11684708] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7758105] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12887920] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 7758105] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7758105] [evidence TAS]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of hair follicle development [goid 51798] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space [goid 19215] [pmid 11684708] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 7758105] [evidence IPI]	MGC11078; Hs.89862	MGC11078; Hs.89862
Homo sapiens	RefSeq	NM_001037637.1	ILMN_13958	BTF3	NM_001037637.1	NM_001037637.1		689	83641884	NM_001037637.1	BTF3	NP_001032726.1	ILMN_2245676	0007550575	I	324	GACGCTGTCTCAACCTCCACCTCGCGGCGGAACCCGAGGACAGGAGCCTC	5	+	72794573-72794622	5q13.2c	Homo sapiens basic transcription factor 3 (BTF3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 2320128] [evidence TAS]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 1386332] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18025262] [evidence IPI]	BETA-NAC; BTF3a; BTF3b; NACB	BETA-NAC; BTF3a; BTF3b; NACB
Homo sapiens	RefSeq	NM_001037637.1	ILMN_13958	BTF3	NM_001037637.1	NM_001037637.1		689	83641884	NM_001037637.1	BTF3	NP_001032726.1	ILMN_2319414	0002650468	A	706	GGTGCGGATAGTCTGACTAGTTTAAGGAGACTGGCCGAAGCTCTGCCCAA	5	+	72798888-72798937	5q13.2c	Homo sapiens basic transcription factor 3 (BTF3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 2320128] [evidence TAS]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 1386332] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18025262] [evidence IPI]	BETA-NAC; BTF3a; BTF3b; NACB	BETA-NAC; BTF3a; BTF3b; NACB
Homo sapiens	Unigene	Hs.127398	ILMN_76421	HS.127398	Hs.127398		Hs.127398		27846303	BX104799			ILMN_1904378	0003850253	S	271	GAGGAGAGAGATGGGCTGCCGTGGGTAGGAGAAAGGAGAGGGCTAGGAGA	8	+	61356881-61356930		BX104799 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998M093960, mRNA sequence					
Homo sapiens	RefSeq	NM_134264.2	ILMN_5396	WSB1	NM_134265.2	NM_134265.2		26118	58331180	NM_134265.2	WSB1	NP_599027.1	ILMN_1664802	0006110091	A	2233	CTGTTTCTGCAGGGGATGATATTGGTGAGTTGCCAAAGAAGCAATACAGC	17	+	22664611-22664660	17q11.1b	Homo sapiens WD repeat and SOCS box-containing 1 (WSB1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	WSB-1; SWIP1	SWIP1; WSB-1
Homo sapiens	RefSeq	NM_134265.2	ILMN_5396	WSB1	NM_134265.2	NM_134265.2		26118	58331180	NM_134265.2	WSB1	NP_599027.1	ILMN_2415748	0002230615	A	1552	CTTACGAAAGTTGAATTGGGTGAGGCGGGCAAATCACCTGAGGTCAGCAG	17	+	22663930-22663979	17q11.1b	Homo sapiens WD repeat and SOCS box-containing 1 (WSB1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	WSB-1; SWIP1	SWIP1; WSB-1
Homo sapiens	RefSeq	XM_926412.1	ILMN_44700	LOC643043	XM_926412.1	XM_926412.1		643043	89059536	XM_926412.1	LOC643043	XP_931505.1	ILMN_1717232	0000830037	S	86	GCTGCTCCCTCTACAAGATCTACCCTGGACTACCAGGGCTACCACCCCAT	X	-	41067307-41067338:41067429-41067446	Xp11.4b	PREDICTED: Homo sapiens similar to scotin (LOC643043), mRNA.					
Homo sapiens	RefSeq	NM_030954.2	ILMN_24753	RNF170	NM_030954.2	NM_030954.2		81790	21361953	NM_030954.2	RNF170	NP_112216.2	ILMN_1709265	0004050196	S	1418	GTGCTAGCTAAGTTTTGTGCATTTGGAGCAGTTCTGCCTTTTCATTCTGG	8	-	42829931-42829980	8p11.21a	Homo sapiens ring finger protein 170 (RNF170), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ38306; DKFZP564A022	FLJ38306; DKFZP564A022
Homo sapiens	Unigene	Hs.542600	ILMN_106399	HS.542600	Hs.542600		Hs.542600		7040526	AW470499			ILMN_1872104	0006180605	S	146	TGAGCAGAGAGCAGGAGAAAACCAATGGCCCAGTTCAAGCAGTCAGGTGG					xz83h11.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2870853 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001129658.2	ILMN_175520	LOC729204	XM_001129658.2	XM_001129658.2		729204	169204293	XM_001129658.2	LOC729204	XP_001129658.2	ILMN_3225839	0006180382	A	764	AAGCCACGTTCACATTCCTGCACCGTAACAACGGACGAACCCAGGGAGTC	12	-	26169541-26169590	12p12.1a	PREDICTED: Homo sapiens similar to hCG2045644 (LOC729204), mRNA.					
Homo sapiens	RefSeq	XM_001718658.1	ILMN_341963	LOC732419	XM_001718658.1	XM_001718658.1		732419	169218286	XM_001718658.1	LOC732419	XP_001718710.1	ILMN_3241212	0001450196	S	370	CATTTTGACAACTGTGTTCTTAAGCCGGCCACAGAAGGAAAACGGCGCCT					PREDICTED: Homo sapiens hypothetical LOC732419 (LOC732419), mRNA.					
Homo sapiens	RefSeq	XM_944976.1	ILMN_36409	LOC651848	XM_944976.1	XM_944976.1		651848	88979728	XM_944976.1	LOC651848	XP_950069.1	ILMN_1748306	0001660500	S	234	GTGCAGAGAAGAGGATGAGAAGGTAGGAGGCAAGAGTGAAGGAGGCCCTG					PREDICTED: Homo sapiens hypothetical protein LOC651848 (LOC651848), mRNA.					
Homo sapiens	RefSeq	Hs.131205	ILMN_170879	LOC729601	XM_001131117.1	XM_001131117.1		729601	113421921	XM_001131117.1	LOC729601	XP_001131117.1	ILMN_1819991	0004780468	S	202	TGTTCTGCACAGCCACTGCTGATACTAAAGAGGCCGCAACAGGCTGGATC				10p11.23c	PREDICTED: Homo sapiens hypothetical LOC729601 (LOC729601), mRNA.					
Homo sapiens	RefSeq	NM_006799.2	ILMN_4305	PRSS21	NM_006799.2	NM_006799.2		10942	21614534	NM_006799.2	PRSS21	NP_006790.1	ILMN_2382964	0002490367	A	613	AGACTGCTGGGTGACTGGCTGGGGGTACATCAAAGAGGATGAGGCACTGC	16	+	2808928-2808971:2810957-2810962	16p13.3d	Homo sapiens protease, serine, 21 (testisin) (PRSS21), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9826525] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10397266] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10397266] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TEST1; ESP-1; ESP1	ESP1; TEST1; ESP-1
Homo sapiens	RefSeq	NM_006159.1	ILMN_26383	NELL2	NM_006159.1	NM_006159.1		4753	5453765	NM_006159.1	NELL2	NP_006150.1	ILMN_1725417	0007550358	S	2804	CCGTGACATCCTGAACCCTGGATAGAAAGCCTGAGCCCATTGGATCTGTG	12	-	43188674-43188723	12q12g	Homo sapiens NEL-like 2 (chicken) (NELL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	NRP2	NRP2
Homo sapiens	RefSeq	NM_001004469.1	ILMN_172913	OR10J5	NM_001004469.1	NM_001004469.1		127385	52218837	NM_001004469.1	OR10J5	NP_001004469.1	ILMN_1779555	0007570270	S	437	GTGGGTCCTTTGGCATTGGTCTGACTATGGCAGTTCTCCATGTGACAGCC	1	-	159505311-159505360	1q23.2b	Homo sapiens olfactory receptor, family 10, subfamily J, member 5 (OR10J5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-28	OR1-28
Homo sapiens	RefSeq	NM_015446.3	ILMN_164192	AHCTF1	NM_015446.3	NM_015446.3		25909	67551264	NM_015446.3	AHCTF1	NP_056261.3	ILMN_1809139	0001230196	I	8045	GACAGTGTGAAAGCAGTGCGAGTGCGGCCTTTTAGTCAGGTTAGTGATGG	1	-	245069444-245069493	1q44d	Homo sapiens AT hook containing transcription factor 1 (AHCTF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	ELYS; TMBS62; MSTP108; MST108; DKFZp434N093	ELYS; TMBS62; MSTP108; MST108; DKFZp434N093
Homo sapiens	RefSeq	XM_942402.1	ILMN_164192	AHCTF1	NM_015446.3	NM_015446.3		25909	67551264	NM_015446.3	AHCTF1	NP_056261.3	ILMN_1747504	0006040747	A	6300	GGACTCGGTCTAGCAAGGCCATCTTGTTGCCGGACCTTTCTGAACCAAAC	1	-	245079588-245079637	1q44d	Homo sapiens AT hook containing transcription factor 1 (AHCTF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	ELYS; TMBS62; MSTP108; MST108; DKFZp434N093	
Homo sapiens	RefSeq	XM_933310.1	ILMN_46901	LOC645967	XM_945193.2	XM_945193.2		645967	113418335	XM_945193.2	LOC645967	XP_950286.1	ILMN_1696306	0005910379	S	468	GGGGGCTTTTGCCCGCCCGGCTGCTGCGAGGGAGCGCGCAGCCTGCGGCC				6q25.1a	PREDICTED: Homo sapiens hypothetical LOC645967 (LOC645967), mRNA.					
Homo sapiens	RefSeq	NM_178232.2	ILMN_19816	HAPLN3	NM_178232.2	NM_178232.2		145864	32455240	NM_178232.2	HAPLN3	NP_839946.1	ILMN_1654319	0004900086	S	1611	TCCGGAGCTGGGCTTTGGGCCTCTCCTGCCCACCTCTACTTCTCTGTGAA	15	-	89420751-89420800	15q26.1a	Homo sapiens hyaluronan and proteoglycan link protein 3 (HAPLN3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with hyaluronic acid, a polymer composed of repeating dimeric units of glucuronic acid and N-acetyl glucosamine [goid 5540] [evidence IEA]	HsT19883; EXLD1	HsT19883; EXLD1
Homo sapiens	RefSeq	XM_001717646.1	ILMN_348593	LOC100128615	XM_001717646.1	XM_001717646.1		100128615	169166070	XM_001717646.1	LOC100128615	XP_001717698.1	ILMN_3268752	0000460671	M	1714	GAGTACGCCAGAGGAGGAGAGCTACAGCACCAGATATGCCACCAAGGCCA				3q21.3c	PREDICTED: Homo sapiens similar to hCG2022586 (LOC100128615), mRNA.					
Homo sapiens	RefSeq	XR_038783.1	ILMN_350439	LOC100129295	XR_038783.1	XR_038783.1		100129295	169161904	XR_038783.1	LOC100129295		ILMN_3270813	0007200646	M	2159	CAGTGCGTACAAAGGCTAGAGAACCACCAGAGGGGGCTACCAAAGTTAGG				1q25.3g	PREDICTED: Homo sapiens misc_RNA (LOC100129295), miscRNA.					
Homo sapiens	RefSeq	XM_001133269.2	ILMN_167341	IRG1	XM_001133269.2	XM_001133269.2		730249	169205964	XM_001133269.2	IRG1	XP_001133269.2	ILMN_3193271	0001770072	A	1659	GCTCAGTAAGGTGGAGCTGGAGTACCCTCCGGACAACTTGCCAAGCTTCA	13	+	76429770-76429819	13q22.3a	PREDICTED: Homo sapiens immunoresponsive 1 homolog (mouse) (IRG1), mRNA.		The chemical reactions and pathways resulting in the breakdown of propionate, the anion derived from propionic acid [goid 19543] [evidence IEA]	Catalysis of the reaction: 2-hydroxybutane-1,2,3-tricarboxylate = (Z)-but-2-ene-1,2,3-tricarboxylate + H2O [goid 47547] [evidence IEA]		
Homo sapiens	RefSeq	NM_014453.2	ILMN_1695	CHMP2A	NM_014453.2	NM_014453.2		27243	38372936	NM_014453.2	CHMP2A	NP_055268.1	ILMN_1656621	0003290181	I	80	CCAGAAAGAGAAGCGTGACCCGGAAGCGGAAACGGGTGTCCGTCCCAGCT	19	-	63758169-63758218	19q13.43c	Homo sapiens chromatin modifying protein 2A (CHMP2A), transcript variant 1, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a specific domain of a protein [goid 19904] [pmid 17928862] [evidence IPI]	VPS2; VPS2A; CHMP2; BC-2; BC2	VPS2; VPS2A; CHMP2; BC-2; BC2
Homo sapiens	RefSeq	NM_014453.2	ILMN_1695	CHMP2A	NM_014453.2	NM_014453.2		27243	38372936	NM_014453.2	CHMP2A	NP_055268.1	ILMN_1671893	0004260762	A	704	CCTCAACTGGGGGCTCGCTTAGTGTGGCTGCTGGTGGGAAAAAAGCAGAG	19	-	63754899-63754948	19q13.43c	Homo sapiens chromatin modifying protein 2A (CHMP2A), transcript variant 1, mRNA.	A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a specific domain of a protein [goid 19904] [pmid 17928862] [evidence IPI]	VPS2; VPS2A; CHMP2; BC-2; BC2	VPS2; VPS2A; CHMP2; BC-2; BC2
Homo sapiens	RefSeq	NM_022564.1	ILMN_14963	MMP16	NM_022564.3	NM_022564.3		4325	149999364	NM_022564.3	MMP16	NP_072086.2	ILMN_1702361	0001690376	I	1580	GGCAGTCAGTGCCTGTGCTCTCAAGACAAACTGAAAAGCACAAGACCTAT	8	-	89200131-89200180	8q21.3b-q21.3c	Homo sapiens matrix metallopeptidase 16 (membrane-inserted) (MMP16), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7559440] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7559440] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 7559440] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Increases the activity of an enzyme [goid 8047] [pmid 7559440] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 7559440] [evidence TAS]	MT-MMP3; MT3-MMP; MMP-X2; MT-MMP2	MT-MMP3; MT3-MMP; MMP-X2; MT-MMP2
Homo sapiens	RefSeq	XM_001725227.1	ILMN_339169	LOC100132213	XM_001725227.1	XM_001725227.1		100132213	169166226	XM_001725227.1	LOC100132213	XP_001725279.1	ILMN_3239004	0001240348	S	1868	GCCGCCATTTTTTAAAGGGTCCGCAGCCTGATGCTGCCGAGTAAGGGGGG	4	+	132868078-132868108:132868109-132868127	4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100132213 (LOC100132213), mRNA.					
Homo sapiens	RefSeq	NM_002699.2	ILMN_668	POU3F1	NM_002699.2	NM_002699.2		5453	27545318	NM_002699.2	POU3F1	NP_002690.2	ILMN_1670782	0005340097	S	1882	TAGAAGGATGCGCCCCACCCCGCTTTCCCCTTTCTCCGGGCTTGGTTTTT	1	-	38283106-38283155	1p34.3b	Homo sapiens POU domain, class 3, transcription factor 1 (POU3F1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9242494] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8451175] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8662541] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 9242494] [evidence IDA]	OCT6; SCIP; OTF6	OCT6; SCIP; OTF6
Homo sapiens	RefSeq	XM_932756.1	ILMN_170861	LOC728452	XM_001130826.1	XM_001130826.1		728452	113416606	XM_001130826.1	LOC728452	XP_001130826.1	ILMN_1722223	0006900300	A	1088	AGAATCACCAGGATGGAACACAGGTCTTGCAGGATCACTTGAAACCTTCT	5	+	70546791-70546840	5q13.2b	PREDICTED: Homo sapiens similar to nuclear pore membrane protein 121 (LOC728452), mRNA.					
Homo sapiens	RefSeq	XM_001720809.1	ILMN_338355	LOC100133669	XM_001720809.1	XM_001720809.1		100133669	169174339	XM_001720809.1	LOC100133669	XP_001720861.1	ILMN_3203238	0006280315	A	12	ATAGATGGGGAAGCTGAGGCCCAGAAGGGGGCTGAGACCACCTCCCAGTT					PREDICTED: Homo sapiens similar to hCG1994695 (LOC100133669), mRNA.					
Homo sapiens	RefSeq	NR_002187.1	ILMN_16558	LOC286016	NR_002187.2	NR_002187.2		286016	142361619	NR_002187.2	LOC286016		ILMN_1684114	0007560053	S	1894	AGAAGCCAGGGGTGCTGCCCTCTCCCACGGTGCCAACGCCTTTGTGTGTT	7	+	128484406-128484455	7q32.1a	Homo sapiens triosephosphate isomerase 1 pseudogene (LOC286016), non-coding RNA.					
Homo sapiens	RefSeq	NM_000688.4	ILMN_20926	ALAS1	NM_000688.4	NM_000688.4		211	40316942	NM_000688.4	ALAS1	NP_000679.1	ILMN_1700047	0005220097	A	2044	CCTACGGATTGCCCCCACCCCTCACCACACACCCCAGATGATGAACTACT	3	+	52221421-52221470	3p21.1e	Homo sapiens aminolevulinate, delta-, synthase 1 (ALAS1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [pmid 2347585] [evidence TAS]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next [goid 33014] [evidence IEA]	Catalysis of the reaction: succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [goid 3870] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MIG4; ALAS3; ALAS; ALASH	MIG4; ALAS3; ALAS; ALASH
Homo sapiens	RefSeq	NM_000688.4	ILMN_20926	ALAS1	NM_000688.4	NM_000688.4		211	40316942	NM_000688.4	ALAS1	NP_000679.1	ILMN_1728309	0007150014	I	204	ACCCCTTCCTCGGGTTTAGGGGATGTGGGGACCAGGAGAAAGTCAGGATC	3	+	52207803-52207852	3p21.1e	Homo sapiens aminolevulinate, delta-, synthase 1 (ALAS1), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the formation of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, from less complex precursors [goid 6783] [pmid 2347585] [evidence TAS]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next [goid 33014] [evidence IEA]	Catalysis of the reaction: succinyl-CoA + glycine = 5-aminolevulinate + CoA + CO2 [goid 3870] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor) [goid 16769] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MIG4; ALAS3; ALAS; ALASH	MIG4; ALAS3; ALAS; ALASH
Homo sapiens	RefSeq	XM_929243.1	ILMN_176790	LOC729759	XM_001133865.1	XM_001133865.1		729759	113402455	XM_001133865.1	LOC729759	XP_001133865.1	ILMN_1679910	0005890360	S	187	GGTAGATAATGGTGGTGATTCTATTTCTTGTGAAAGTCCACTTACTCTAG	1	+	356909-356958	1p36.33b	PREDICTED: Homo sapiens similar to Olfactory receptor 4F3 (LOC729759), mRNA.					
Homo sapiens	Unigene	Hs.566280	ILMN_118629	HS.566280	Hs.566280		Hs.566280		12524731	BG058337			ILMN_1830394	0005720689	S	290	CCATCTCCAATGATAAGAATGTTCTACTCTTCTTCCTGGTACGGGGAGGG					7f80b05.x1 Lupski_dorsal_root_ganglion Homo sapiens cDNA clone IMAGE:3303128 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001723.3	ILMN_20946	DST	NM_001723.4	NM_001723.4		667	148613859	NM_001723.4	DST	NP_001714.1	ILMN_1675992	0004120563	A	1929	GGTCCCATCTGTGTGCTTCACCGTTCCTCCACCAAACAAAGAAGCGGTGG	6	-	56607231-56607280	6p12.1a	Homo sapiens dystonin (DST), transcript variant 1e, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IEA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IEA]; Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [pmid 2461961] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8575775] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11751855] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 14581450] [evidence IDA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [pmid 11375975] [evidence TAS]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [pmid 8575775] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IEA]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 10428034] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11375975] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 8575775] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [pmid 11375975] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [pmid 11751855] [evidence IEP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 11375975] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11375975] [evidence IPI]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 8575775] [evidence ISS]	CATX-15; KIAA0465; D6S1101; DMH; BP240; MACF2; BPAG1; KIAA1470; BPA; DKFZp564B2416; FLJ46791	CATX-15; KIAA0465; D6S1101; DMH; BP240; MACF2; BPAG1; KIAA1470; BPA; FLJ46791
Homo sapiens	RefSeq	NM_001723.3	ILMN_20946	DST	NM_001723.4	NM_001723.4		667	148613859	NM_001723.4	DST	NP_001714.1	ILMN_1703913	0002940129	I	8421	GCACTCGCTGAAAGAGCACGTCATGAAGCACCATGGAATCAAAGAGAAAG	6	-	56587861-56587910	6p12.1a	Homo sapiens dystonin (DST), transcript variant 1e, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IEA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [evidence IEA]; Intermediate filament cytoskeletal structure that is made up of neurofilaments. Neurofilaments are specialized intermediate filaments found in neurons [goid 60053] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [pmid 2461961] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8575775] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11751855] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 14581450] [evidence IDA]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [pmid 11375975] [evidence TAS]; A cell-substrate junction that forms a point of contact between the basal surface of epithelial cells and the basal lamina. Morphologically resembles desmosomes; attached to intermediate filaments [goid 30056] [pmid 8575775] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The directed movement of organelles or molecules along microtubules from the cell periphery toward the cell body in nerve cell axons [goid 8090] [evidence IEA]; Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule [goid 31110] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of structures formed of microtubules and associated proteins in the cytoplasm of a cell [goid 31122] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 10428034] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11375975] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 8575775] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [pmid 11375975] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising intermediate filaments and their associated proteins [goid 45104] [pmid 11751855] [evidence IEP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 11375975] [evidence IPI]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11375975] [evidence IPI]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 8575775] [evidence ISS]	CATX-15; KIAA0465; D6S1101; DMH; BP240; MACF2; BPAG1; KIAA1470; BPA; DKFZp564B2416; FLJ46791	CATX-15; KIAA0465; D6S1101; DMH; BP240; MACF2; BPAG1; KIAA1470; BPA; FLJ46791
Homo sapiens	RefSeq	NM_022354.1	ILMN_167140	SPATA1	NM_001081472.1	NM_001081472.1		64173	125490353	NM_001081472.1	SPATA1	NP_001074941.1	ILMN_1685680	0003870538	S	1337	GCCAGGGAGATCAAGATGAGACCAAAGAATCTGGCAAACATCACAGACTC	1	+	84787182-84787231	1p22.3f	Homo sapiens spermatogenesis associated 1 (SPATA1), mRNA.				SP-2; SPAP1	SP-2; SPAP1
Homo sapiens	RefSeq	NM_003298.2	ILMN_183815	NR2C2	NM_003298.3	NM_003298.3		7182	83035137	NM_003298.3	NR2C2	NP_003289.2	ILMN_1724479	0007150382	S	2066	CGCAAACCACACACCTGCCAAGGAGCAACAGAATCCTTCCAGGACCGTTC	3	+	15054584-15054633	3p24.3e	Homo sapiens nuclear receptor subfamily 2, group C, member 2 (NR2C2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9006963] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9006963] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9006963] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9006963] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TAK1; TR4; TR2R1; hTAK1	TAK1; hTAK1; TR4; TR2R1
Homo sapiens	RefSeq	NM_003298.3	ILMN_183815	NR2C2	NM_003298.3	NM_003298.3		7182	83035137	NM_003298.3	NR2C2	NP_003289.2	ILMN_3251303	0000020301	S	6641	GGCCTGACTCCCAAAGATGGTAGCAATTTCCCAGGCTTGCGCTGTGCTCA	3	+	15063445-15063494	3p24.3e	Homo sapiens nuclear receptor subfamily 2, group C, member 2 (NR2C2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9006963] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9006963] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9006963] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9006963] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TAK1; TR4; TR2R1; hTAK1	TAK1; hTAK1; TR4; TR2R1
Homo sapiens	RefSeq	NM_004563.2	ILMN_170268	PCK2	NM_004563.2	NM_004563.2		5106	66346720	NM_004563.2	PCK2	NP_004554.2	ILMN_1671791	0001780446	I	1926	CCCCAAGGACTTCTGGGAACAGGAGGTTCGTGACATTCGGAGCTACCTGA	14	+	23642884-23642933	14q12a	Homo sapiens phosphoenolpyruvate carboxykinase 2 (mitochondrial) (PCK2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8645161] [evidence TAS]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the reaction: source of phosphate + oxaloacetate = phosphoenolpyruvate + CO2 [goid 4611] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Catalysis of the reaction: GTP + oxaloacetate = GDP + phosphoenolpyruvate + CO2 [goid 4613] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with purine nucleotides, any compound consisting of a purine nucleoside esterified with (ortho)phosphate [goid 17076] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PEPCK; PEPCK2; PEPCK-M	PEPCK; PEPCK2; PEPCK-M
Homo sapiens	RefSeq	NR_031686.1	ILMN_388736	MIR548P	NR_031686.1	NR_031686.1		100302288	269847434	NR_031686.1	MIR548P		ILMN_3311120	0003310706	S	4	GGTTGGTATAAAATTAATTGCAGTTTTTGTCATTACTTTCAATAGCAAAA					Homo sapiens microRNA 548p (MIR548P), microRNA.					
Homo sapiens	RefSeq	NM_017705.2	ILMN_19134	PAQR5	NM_017705.2	NM_017705.2		54852	31377751	NM_017705.2	PAQR5	NP_060175.2	ILMN_1806434	0001410255	S	3779	CCTAATGGGATGTACCTCTCCCCACTCCCCTTGCTTGAGAAGCACTACTC	15	+	67485623-67485672	15q23a	Homo sapiens progestin and adipoQ receptor family member V (PAQR5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]	MPRG; FLJ20190	MPRG; FLJ20190
Homo sapiens	RefSeq	NM_017699.1	ILMN_24635	SIDT1	NM_017699.2	NM_017699.2		54847	116812583	NM_017699.2	SIDT1	NP_060169.2	ILMN_1795118	0007000026	S	4383	GGCAGCTCTGTGTCTGAGAAGTTCTACATTGACCAGGCCCCCTTGTTGCC	3	+	113347803-113347852	3q13.2b	Homo sapiens SID1 transmembrane family, member 1 (SIDT1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			SID1; B830021E24Rik; FLJ20174; SID-1	SID1; B830021E24Rik; FLJ20174; SID-1
Homo sapiens	RefSeq	NM_199282.1	ILMN_2701	ARHGAP27	NM_199282.1	NM_199282.1		201176	40548321	NM_199282.1	ARHGAP27	NP_954976.1	ILMN_2103362	0001260239	S	3182	GAGGACACAACCTCAAGAAAGGAAGCGTGAACCCCAGGGAACAGCGGGTC	17	-	40827454-40827503	17q21.31d	Homo sapiens Rho GTPase activating protein 27 (ARHGAP27), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The uptake of external materials by cells, utilizing receptors to ensure specificity of transport. A specific receptor on the cell surface binds tightly to the extracellular macromolecule (the ligand) that it recognizes; the plasma-membrane region containing the receptor-ligand complex then undergoes endocytosis, forming a transport vesicle containing the receptor-ligand complex and excluding most other plasma-membrane proteins. Receptor-mediated endocytosis generally occurs via clathrin-coated pits and vesicles [goid 6898] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that activates or increases the activity of the GTPase Cdc42 [goid 43089] [evidence ISS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence ISS]; Increases the rate of GTP hydrolysis by a GTPase of the Rac family [goid 30675] [evidence ISS]	FLJ43547; CAMGAP1; MGC120624	CAMGAP1; FLJ43547; MGC120624
Homo sapiens	RefSeq	XM_942896.1	ILMN_45896	LOC647579	XM_942896.1	XM_942896.1		647579	88944458	XM_942896.1	LOC647579	XP_947989.1	ILMN_1652758	0007320397	S	621	TCCCAGTCCCTCCTCCGCCTACCTCGGAGCCCACATTTGGGATTTCTACT					PREDICTED: Homo sapiens hypothetical protein LOC647579 (LOC647579), mRNA.					
Homo sapiens	RefSeq	NM_003037.1	ILMN_15504	SLAMF1	NM_003037.1	NM_003037.1		6504	4506968	NM_003037.1	SLAMF1	NP_003028.1	ILMN_1770768	0005810136	S	1346	CAGTGGCTGCAGGCGCAGAACAGAGCGTTACTTGATAACAGCGTTCCATC	1	-	158846908-158846957	1q23.3a	Homo sapiens signaling lymphocytic activation molecule family member 1 (SLAMF1), mRNA.	The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor [goid 46649] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 7617038] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor [goid 46649] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 7617038] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7617038] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDw150; CD150; SLAM	CDw150; CD150; SLAM
Homo sapiens	RefSeq	NM_030904.1	ILMN_19442	OR2T1	NM_030904.1	NM_030904.1		26696	53793654	NM_030904.1	OR2T1	NP_112166.1	ILMN_1772882	0001340612	S	1057	AGGGCCTTGGGGAGGTTCAAGGGTCCTCAAAGGGTGTCAGGAGGTGTCTT	1	+	246636975-246637024	1q44f	Homo sapiens olfactory receptor, family 2, subfamily T, member 1 (OR2T1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-25	OR1-25
Homo sapiens	RefSeq	NM_021927.1	ILMN_2309	GUF1	NM_021927.1	NM_021927.1		60558	11345459	NM_021927.1	GUF1	NP_068746.1	ILMN_1696330	0005890338	S	2341	GCCTGTTCTCAAATATCTGTTCCAACCACTCACTAGTAAGGTGACCGTGG	4	+	44395629-44395678	4p13b	Homo sapiens GUF1 GTPase homolog (S. cerevisiae) (GUF1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ13220	FLJ13220
Homo sapiens	RefSeq	NM_207385.1	ILMN_28110	C16ORF47	NM_207385.1	NM_207385.1		388289	46409401	NM_207385.1	C16orf47	NP_997268.1	ILMN_1784128	0006280402	S	1125	TGTCGCTGGGCAACCAAGCATCCTTCCAGCTGCCCCAGAAAGAATCTCAC	16	-	71718170-71718219	16q22.3b	Homo sapiens chromosome 16 open reading frame 47 (C16orf47), mRNA.				FLJ26184	FLJ26184
Homo sapiens	RefSeq	XM_935706.1	ILMN_39365	LOC641945	XM_935706.1	XM_935706.1		641945	89027690	XM_935706.1	LOC641945	XP_940799.1	ILMN_1683853	0000840743	S	1	ATGGACCAGTTCTACGTGAGCAACTCTGTTTCTGCAAAGGGTGAGCGTGG					PREDICTED: Homo sapiens similar to S-adenosylmethionine decarboxylase 1 (LOC641945), mRNA.					
Homo sapiens	RefSeq	XM_001722663.1	ILMN_337610	LOC100131606	XM_001722663.1	XM_001722663.1		100131606	169213890	XM_001722663.1	LOC100131606	XP_001722715.1	ILMN_3202306	0002450746	A	121	CCTTCTGCCTCCGAGTGCAATGCCTTCCCCCGAGTCTCCAAGGTACCAAA				19q13.12b	PREDICTED: Homo sapiens hypothetical protein LOC100131606 (LOC100131606), mRNA.					
Homo sapiens	RefSeq	NM_001080409.1	ILMN_169283	ZNF99	NM_001080409.1	NM_001080409.1		7652	122937212	NM_001080409.1	ZNF99	NP_001073878.1	ILMN_2229624	0006200689	S	3057	CCATCTTTCAGCCCTTACTAAACATAAGATAATTCATACTGGGGAGAAGC	19	-	22939011-22939060	19p12c	Homo sapiens zinc finger protein 99 (ZNF99), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC24986; F8281; C19orf9	MGC24986; F8281; C19orf9
Homo sapiens	RefSeq	NM_017828.3	ILMN_33223	COMMD4	NM_017828.3	NM_017828.3		54939	88703049	NM_017828.3	COMMD4	NP_060298.2	ILMN_2096654	0002370093	S	678	TGTGTGGAGCCGCCCTGCCCGTATGGAGTCACGCCCTCTGAACTGCTCTT	15	+	73419420-73419469	15q24.2a	Homo sapiens COMM domain containing 4 (COMMD4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15799966] [evidence IPI]	FLJ20452	FLJ20452
Homo sapiens	RefSeq	XM_945269.1	ILMN_308611	ZNRF3	NM_032173.2	NM_032173.2		84133	150378446	NM_032173.2	ZNRF3	NP_115549.2	ILMN_1788738	0001340253	A	5850	GCTGGCTTTAACTCTCAGCTCCTTCCCTGTCTCCTCCTAATCCAAGCCCT	22	+	27782784-27782833	22q12.1c	Homo sapiens zinc and ring finger 3 (ZNRF3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF203; BK747E2.3	
Homo sapiens	Unigene	Hs.573029	ILMN_125210	HS.573029	Hs.573029		Hs.573029		11449069	BF436754			ILMN_1863972	0007560672	S	150	GCCAGAAGTCCAAAATCGAGGTGTCGACAGGGTTGGTGCCTTCCAAGTGC	4	+	190960027-190960076		7p09h07.x1 NCI_CGAP_Br22 Homo sapiens cDNA clone IMAGE:3645541 3, mRNA sequence					
Homo sapiens	Unigene	Hs.577221	ILMN_129402	HS.577221	Hs.577221		Hs.577221		83129400	DB337584			ILMN_1873508	0006840672	S	264	CTGGGCAGTGTCCCTGAGGAGGCGGGTCCACACACTATGGAAGGGAAAAT	11	-	9247870-9247919		DB337584 TESTI2 Homo sapiens cDNA clone TESTI2024062 3, mRNA sequence					
Homo sapiens	RefSeq	NM_018418.2	ILMN_2515	SPATA7	NM_018418.2	NM_018418.2		55812	94536847	NM_018418.2	SPATA7	NP_060888.2	ILMN_2283726	0003130687	I	271	CTCTCAGACTAAGCACTCTCCAGCTGGTCAAGAATCACATGGCTGTTCAC	14	+	87929511-87929560	14q31.3d	Homo sapiens spermatogenesis associated 7 (SPATA7), transcript variant 1, mRNA.				MGC102934; DKFZp686D07199; HSD3; HSD-3.1	MGC102934; HSD3; HSD-3.1
Homo sapiens	RefSeq	NM_018418.2	ILMN_2515	SPATA7	NM_018418.2	NM_018418.2		55812	94536847	NM_018418.2	SPATA7	NP_060888.2	ILMN_2388177	0003360609	A	1748	AACAGATCGGGAAACTTCTGTGAATGTCATTGAAGGTGATAGTGACCCTG	14	+	87974312-87974361	14q31.3d	Homo sapiens spermatogenesis associated 7 (SPATA7), transcript variant 1, mRNA.				MGC102934; DKFZp686D07199; HSD3; HSD-3.1	MGC102934; HSD3; HSD-3.1
Homo sapiens	RefSeq	NM_001040649.1	ILMN_181704	ACP1	NM_001040649.1	NM_001040649.1		52	96304456	NM_001040649.1	ACP1	NP_001035739.1	ILMN_2344956	0006110672	A	85	CGCGGGAAGATGGCGGAACAGGCTACCAAGTCCGTGCTGTTTGTGTGTCT	2	+	254956-254964:254965-255005	2p25.3g	Homo sapiens acid phosphatase 1, soluble (ACP1), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1587862] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA];  [goid 4726] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [pmid 1587862] [evidence TAS];  [goid 4726] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]	HAAP; MGC3499; MGC111030	HAAP; MGC3499; MGC111030
Homo sapiens	RefSeq	NM_001037804.1	ILMN_11998	DEFB130	NM_001037804.1	NM_001037804.1		245940	83699413	NM_001037804.1	DEFB130	NP_001032893.1	ILMN_3238931	0006220017	S	181	AGAAGGTGGTGGATACTTGAGCCCTATCCAACTCCGGTTCCCAAAGGAAA	8	-	12212852-12212901	8p23.1a	Homo sapiens defensin, beta 130 (DEFB130), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		DEFB-30	DEFB-30
Homo sapiens	Unigene	Hs.568434	ILMN_120615	HS.568434	Hs.568434		Hs.568434		51466124	XM_499517			ILMN_1860156	0005050079	S	912	GCTATTGGATGGACTGGGGGAGTGAAGACCAAAAGGTCATTTTCAGGAAA					PREDICTED: Homo sapiens LOC442530 (LOC442530), mRNA					
Homo sapiens	RefSeq	XM_933842.1	ILMN_46249	LOC646719	XM_933842.2	XM_933842.2		646719	113416517	XM_933842.2	LOC646719	XP_938935.1	ILMN_1751847	0003520253	S	1659	TTGCAAAAATTAGCTCAAAATGGATCAATGACCTAAATGTAAGAGAAAAC	5	-	36901425-36901474	5p13.2b	PREDICTED: Homo sapiens hypothetical LOC646719 (LOC646719), mRNA.					
Homo sapiens	RefSeq	NM_003877.3	ILMN_4851	SOCS2	NM_003877.3	NM_003877.3		8835	21536304	NM_003877.3	SOCS2	NP_003868.1	ILMN_2131861	0006770673	S	1949	GTAGGTATAGGCATTCTACCCTTTGAAATAGCTGTGTCCCAACCTGTTGC	12	+	92493848-92493897	12q22b	Homo sapiens suppressor of cytokine signaling 2 (SOCS2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9727029] [evidence NAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 9727029] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9266833] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9266833] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9344848] [evidence TAS]; Interacting selectively with the growth hormone receptor [goid 5131] [pmid 12135564] [evidence NAS]; Interacting selectively with the prolactin receptor [goid 5148] [evidence NAS]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [pmid 9727029] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11781573] [evidence IPI]; The binding activity of a molecule that brings together a molecule of the JAK signal transduction pathway and one or more other molecules of the pathway, permitting them to function in a coordinated way [goid 8269] [pmid 9266833] [evidence TAS]	SSI2; Cish2; STATI2; SSI-2; SOCS-2; CIS2	SSI2; Cish2; STATI2; SSI-2; SOCS-2; CIS2
Homo sapiens	RefSeq	NM_003877.3	ILMN_4851	SOCS2	NM_003877.3	NM_003877.3		8835	21536304	NM_003877.3	SOCS2	NP_003868.1	ILMN_1798926	0001690692	S	1554	GGAATACTGAAGAAGTGGGAAGGAACCAAGCTGACACAGGCCTCACTGCA	12	+	92493453-92493502	12q22b	Homo sapiens suppressor of cytokine signaling 2 (SOCS2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9727029] [evidence NAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 9727029] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9266833] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 9266833] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9344848] [evidence TAS]; Interacting selectively with the growth hormone receptor [goid 5131] [pmid 12135564] [evidence NAS]; Interacting selectively with the prolactin receptor [goid 5148] [evidence NAS]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [pmid 9727029] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11781573] [evidence IPI]; The binding activity of a molecule that brings together a molecule of the JAK signal transduction pathway and one or more other molecules of the pathway, permitting them to function in a coordinated way [goid 8269] [pmid 9266833] [evidence TAS]	SSI2; Cish2; STATI2; SSI-2; SOCS-2; CIS2	SSI2; Cish2; STATI2; SSI-2; SOCS-2; CIS2
Homo sapiens	RefSeq	NM_005906.3	ILMN_24831	MAK	NM_005906.3	NM_005906.3		4117	31652253	NM_005906.3	MAK	NP_005897.1	ILMN_1803984	0005290100	S	3291	TTCCCCCAAGCCAGCTCATGCTGCTGACCACTGACTCAGCTCTGACCTTC	6	-	10871431-10871480	6p24.2a	Homo sapiens male germ cell-associated kinase (MAK), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 2183027] [evidence NAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	dJ417M14.2	dJ417M14.2
Homo sapiens	RefSeq	NM_000542.2	ILMN_19235	SFTPB	NM_000542.2	NM_000542.2		6439	33943098	NM_000542.2	SFTPB	NP_000533.2	ILMN_2359835	0001710356	A	1117	CCTCTCCAGTGTATCCACAGCCCCGACCTTTGATGAGAACTCAGCTGTCC	2	-	85888578-85888595:85888596-85888627	2p11.2f	Homo sapiens surfactant protein B (SFTPB), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [pmid 10378403] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 10378403] [evidence TAS]; Any process that modulates the surface tension of a liquid. Surface tension is the property that makes a liquid behave as if it had an elastic skin on its surface at the interface with a gas or an immiscible liquid [goid 50828] [evidence IEA]		SP-B; SFTP3; PSP-B; SFTB3; SMDP1	SP-B; SFTP3; PSP-B; SFTB3; SMDP1
Homo sapiens	RefSeq	NM_182568.2	ILMN_306819	CCDC144A	NM_014695.1	NM_014695.1		9720	149363641	NM_014695.1	CCDC144A	NP_055510.1	ILMN_1707277	0003450746	A	797	GAAAATAAGCAGCCACAGAAAACGTCTCAAGAACCAGAAATGGCTAAGGA	17	+	16551564-16551581:16552835-16552866	17p11.2i-p11.2h	Homo sapiens coiled-coil domain containing 144A (CCDC144A), mRNA.				MGC164650; MGC39818; FLJ43983; KIAA0565	MGC126634
Homo sapiens	RefSeq	XM_113947.7	ILMN_306819	CCDC144A	NM_014695.1	NM_014695.1		9720	149363641	NM_014695.1	CCDC144A	NP_055510.1	ILMN_1742032	0006420528	S	193	CTACCCGGGGGACCAGTGGTCCTCGGGCTTCCCCTACAGCTGGTGGAAAA	17	+	16534556-16534605	17p11.2i-p11.2h	Homo sapiens coiled-coil domain containing 144A (CCDC144A), mRNA.				MGC164650; MGC39818; FLJ43983; KIAA0565	
Homo sapiens	RefSeq	XM_945320.1	ILMN_306819	CCDC144A	NM_014695.1	NM_014695.1		9720	149363641	NM_014695.1	CCDC144A	NP_055510.1	ILMN_1727646	0000160369	A	800	AATAAGCAGCCACAGAAAACGTCTCAAGAACCAGAAATGGCTAAGGATTG	17	+	16551567-16551581:16552835-16552869	17p11.2i-p11.2h	Homo sapiens coiled-coil domain containing 144A (CCDC144A), mRNA.				MGC164650; MGC39818; FLJ43983; KIAA0565	
Homo sapiens	RefSeq	XM_946172.1	ILMN_137204	TM4SF19	XM_946172.1	XM_946172.1		116211	88971813	XM_946172.1	TM4SF19	XP_951265.1	ILMN_1794532	0000070347	I	175	GCTGTGGGCAGCACCTAGAAACAGCCGGCAAAGTCGATTTCCCCATCTCA				3q29f	PREDICTED: Homo sapiens transmembrane 4 L six family member 19, transcript variant 3 (TM4SF19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_015323.2	ILMN_26630	KIAA0776	NM_015323.2	NM_015323.2		23376	37059722	NM_015323.2	KIAA0776	NP_056138.1	ILMN_2058975	0004150564	S	2031	CCAACATCGACAAGCACTGGCTGAACAGCTAAAGGTCACAGAAGACCCTG	6	+	97107091-97107140	6q16.1f	Homo sapiens KIAA0776 (KIAA0776), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	RP3-393D12.1	RP3-393D12.1
Homo sapiens	RefSeq	NM_172345.1	ILMN_21524	SPAG9	NM_172345.1	NM_172345.1		9043	27436921	NM_172345.1	SPAG9	NP_758853.1	ILMN_1768798	0001070687	I	2789	GTACATGGGATTTCATGAGCCAGAGGAGGCATTTGGATCCATTGGGCCAC	17	-	46396381-46396430	17q21.33b	Homo sapiens sperm associated antigen 9 (SPAG9), transcript variant 2, mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9480848] [evidence TAS]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 9480848] [evidence TAS]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14743216] [evidence IPI]; Interacting selectively with JUN kinase, an enzyme that catalyzes the phosphorylation and activation of members of the JUN family [goid 8432] [evidence IEA]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [evidence IEA]	PHET; MGC74461; HSS; PIG6; KIAA0516; FLJ34602; MGC14967; MGC117291; JLP; HLC4; FLJ13450; FLJ14006	PHET; MGC74461; HSS; PIG6; KIAA0516; FLJ34602; MGC14967; MGC117291; JLP; HLC4; FLJ13450; FLJ14006
Homo sapiens	RefSeq	XM_001723422.1	ILMN_346862	LOC100129737	XM_001723422.1	XM_001723422.1		100129737	169171803	XM_001723422.1	LOC100129737	XP_001723474.1	ILMN_3190226	0004230114	A	61	GAATCTAGATCACAGTCAATGAAGGAGCCTGGCTTTATTAAAGAAACATC				7q21.2a	PREDICTED: Homo sapiens hypothetical protein LOC100129737, transcript variant 1 (LOC100129737), mRNA.					
Homo sapiens	RefSeq	XM_001724239.1	ILMN_339183	LOC100134598	XM_001724239.1	XM_001724239.1		100134598	169170543	XM_001724239.1	LOC100134598	XP_001724291.1	ILMN_3239014	0000830050	S	381	GCGTGCGCCACCACGCCCAGCTAATTTTGTATTTTTAGTAGAGACGGGGT	7	-	97250627-97250676		PREDICTED: Homo sapiens hypothetical protein LOC100134598 (LOC100134598), mRNA.					
Homo sapiens	RefSeq	NM_016581.2	ILMN_27322	ECSIT	NM_016581.2	NM_016581.2		51295	20149632	NM_016581.2	ECSIT	NP_057665.2	ILMN_2233604	0000870328	S	1311	CTGCCCGAGGACCACCAGGAAGAAGACGACAACCTGCAGCGACAGCAGCA	19	-	11478011-11478060	19p13.2a	Homo sapiens ECSIT homolog (Drosophila) (ECSIT), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17344420] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17344420] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 17344420] [evidence IDA]	The process that gives rise to the mesoderm. This process pertains to the initial formation of the structure from unspecified parts [goid 1707] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; Any process that modulates the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 51341] [pmid 17344420] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17344420] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [pmid 17344420] [evidence IDA]	SITPEC	SITPEC
Homo sapiens	RefSeq	XM_931458.1	ILMN_33816	LOC653178	XM_931458.1	XM_931458.1		653178	89061287	XM_931458.1	LOC653178	XP_936551.1	ILMN_1767590	0002810307	I	1299	ACTTGATTCCACGGCTGTCAACCCCACCGGCAGTCATCCCGCCAACCCCA	Y	+	9977695-9977744		PREDICTED: Homo sapiens similar to testis specific protein, Y-linked 1, transcript variant 2 (LOC653178), mRNA.					
Homo sapiens	RefSeq	XM_931458.1	ILMN_33816	LOC653178	XM_931458.1	XM_931458.1		653178	89061287	XM_931458.1	LOC653178	XP_936551.1	ILMN_1731521	0006180546	A	1765	AGGACGGCAGTACTCAGCATGGTCTTATGCACAGGAACTAAAGGAAAAAC	Y	+	9978161-9978210		PREDICTED: Homo sapiens similar to testis specific protein, Y-linked 1, transcript variant 2 (LOC653178), mRNA.					
Homo sapiens	RefSeq	NM_001032278.1	ILMN_13399	MMP28	NM_001032278.1	NM_001032278.1		79148	73808270	NM_001032278.1	MMP28	NP_001027449.1	ILMN_2399016	0007100338	A	558	CGGCCTGGGCTGAGAGGATCAGTGACTTGTTTGCTAGACACCGGACCAAA	17	-	34105922-34105971	17q12b	Homo sapiens matrix metallopeptidase 28 (MMP28), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 11121398] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11121398] [evidence TAS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 11255011] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MMP25; MM28	MMP25; MM28
Homo sapiens	RefSeq	XM_001724980.1	ILMN_339983	LOC100129828	XM_001724980.1	XM_001724980.1		100129828	169161453	XM_001724980.1	LOC100129828	XP_001725032.1	ILMN_3182422	0004810014	A	2251	GTCAGCTCCGCGCGGGCATCATCCCTACCAGATTGAGTGTTTTGCACGCA	1	-	2105808-2105857	1p36.33a	PREDICTED: Homo sapiens hypothetical protein LOC100129828 (LOC100129828), mRNA.					
Homo sapiens	RefSeq	NR_030623.1	ILMN_388155	MIR216B	NR_030623.1	NR_030623.1		100126319	262206179	NR_030623.1	MIR216B		ILMN_3310613	0006940112	S	16	CTGCAGGCAAATGTGATGTCACTGAGGAAATCACACACTTACCCGTAGAG				2p16.1d	Homo sapiens microRNA 216b (MIR216B), microRNA.					
Homo sapiens	RefSeq	XR_042017.1	ILMN_342867	C1ORF215	XR_042017.1	XR_042017.1		149421	169161775	XR_042017.1	C1orf215		ILMN_3307252	0002140180	A	415	GAGTCTCCAGAGGAGTTCAAGGGGCTCTGGCAAGAAAAATCAAGGGGCTG				1p36.11b	PREDICTED: Homo sapiens misc_RNA (C1orf215), miscRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_145265.2	ILMN_4615	CCDC127	NM_145265.2	NM_145265.2		133957	34222184	NM_145265.2	CCDC127	NP_660308.1	ILMN_2214955	0002070164	S	901	ACTGCTTTTAGTGACTCGAGGCCAGGCAGTCATGCGCCTTCTGGGTCTCC	5	-	258344-258393	5p15.33e	Homo sapiens coiled-coil domain containing 127 (CCDC127), mRNA.				FLJ25701	FLJ25701
Homo sapiens	RefSeq	XM_039877.12	ILMN_307331	MUC5B	NM_002458.1	NM_002458.1		727897	153945877	NM_002458.1	MUC5B	NP_002449.1	ILMN_1693983	0004390026	S	5423	CCGAAGTGTGAGTGGACAGAGTGGTTTGACGTGGACTTCCCAACCTCAGG	11	+	1220042-1220091	11p15.5c	Homo sapiens mucin 5B, oligomeric mucus/gel-forming (MUC5B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence NAS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 1718282] [evidence IPI]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 7916618] [evidence NAS]	MG1; MUC5; MUC9	
Homo sapiens	RefSeq	XM_943978.1	ILMN_33535	LOC649902	XM_943978.1	XM_943978.1		649902	89038964	XM_943978.1	LOC649902	XP_949071.1	ILMN_1653500	0005220193	S	181	GAGACGGTTTCTGCCCGACTCTCCGCCCCCTTCGTGATAGGCAATGGGAC					PREDICTED: Homo sapiens hypothetical protein LOC649902 (LOC649902), mRNA.					
Homo sapiens	RefSeq	NM_020130.2	ILMN_24837	C8ORF4	NM_020130.3	NM_020130.3		56892	117938275	NM_020130.3	C8orf4	NP_064515.1	ILMN_1656369	0005570731	S	713	GATGGCTGGAGATGACATTTATCCAGGGTCACTTTGTCAGGCCCTAGGAC	8	+	40011701-40011750	8p11.21c	Homo sapiens chromosome 8 open reading frame 4 (C8orf4), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]		MGC22806; TC1; TC-1; hTC-1	TC1; hTC-1; TC-1
Homo sapiens	RefSeq	NM_025049.2	ILMN_7325	PIF1	NM_025049.2	NM_025049.2		80119	82546871	NM_025049.2	PIF1	NP_079325.2	ILMN_2155272	0004810646	S	2333	TCCTTTCAGGCTGCAGAAGGGAGAGGCAATGAAGACAGGTGCTCCGGAAG	15	-	65108106-65108155	15q22.31b	Homo sapiens PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) (PIF1), mRNA.	The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [pmid 16522649] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of a process that affects and monitors the activity of telomeric proteins and the length of telomeric DNA [goid 32204] [pmid 16522649] [evidence IDA]; Any process that stops or reduces the activity of the enzyme telomerase, which catalyzes of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 51974] [pmid 16522649] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 16522649] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16522649] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of a DNA helix [goid 17116] [pmid 16522649] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of a DNA/RNA duplex in the direction 5' to 3' [goid 33682] [pmid 16522649] [evidence IDA]; Interacting selectively with telomere-associated DNA, usually characterized by highly repetitive sequences [goid 42162] [pmid 16522649] [evidence IDA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate; drives the unwinding of the DNA helix in the direction 5' to 3' [goid 43141] [pmid 16522649] [evidence IDA]	C15orf20; PIF	C15orf20; PIF
Homo sapiens	RefSeq	NM_014851.2	ILMN_14418	KLHL21	NM_014851.2	NM_014851.2		9903	55925607	NM_014851.2	KLHL21	NP_055666.2	ILMN_1692785	0001240386	S	4010	AAAACCAGGCACCAGCCTCTGCAGCAATGGGTCCCTCTAGCCTGTGGACA	1	-	6651211-6651260	1p36.31a	Homo sapiens kelch-like 21 (Drosophila) (KLHL21), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0469; MGC99635	KIAA0469; MGC99635
Homo sapiens	RefSeq	NM_016950.2	ILMN_14471	SPOCK3	NM_016950.2	NM_016950.2		50859	93141000	NM_016950.2	SPOCK3	NP_058646.2	ILMN_2342559	0003520750	A	1904	GCATCTTGCTAGACCTAGTTGAGTCAGGATAACAGAGAGATACCACATGG	4	-	167892645-167892646:167892647-167892694	4q32.3c-q32.3d	Homo sapiens sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 (SPOCK3), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [evidence IEA]	TES-3; HSAJ1454	TES-3; HSAJ1454
Homo sapiens	RefSeq	XM_928757.1	ILMN_168592	LOC652768	XR_019482.1	XR_019482.1		652768	113431400	XR_019482.1	LOC652768		ILMN_1776870	0001260400	I	375	TCCCAAGCCCGAGTGGAAGCGCCAGGTGATGGTGGGCAAGATGCAGCTGA					PREDICTED: Homo sapiens similar to espin (LOC652768), mRNA.					
Homo sapiens	RefSeq	NM_001102.2	ILMN_28160	ACTN1	NM_001102.2	NM_001102.2		87	12025669	NM_001102.2	ACTN1	NP_001093.1	ILMN_2232177	0005080364	S	2979	GGCCCACGTGGCATCGATCCTCCCTGCCCGCGAAGTGACAGTTTACAAAA	14	-	68411162-68411211	14q24.1d	Homo sapiens actinin, alpha 1 (ACTN1), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [pmid 16807302] [evidence IMP]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [evidence IEA]; A temporary protrusion or retractile process of a cell, associated with flowing movements of the protoplasm, and serving for locomotion and feeding [goid 31143] [pmid 1629252] [evidence TAS]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 16807302] [evidence NAS]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [pmid 16807302] [evidence IMP]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the movement of a cell [goid 51271] [pmid 7983147] [evidence IMP]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [pmid 7983147] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10793131] [evidence IPI]; Interacting selectively with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane [goid 17166] [pmid 15988023] [evidence IPI]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IEA]	FLJ40884	FLJ40884
Homo sapiens	RefSeq	XM_944125.1	ILMN_17542	NFATC2IP	NM_032815.3	NM_032815.3		84901	46447822	NM_032815.3	NFATC2IP	NP_116204.3	ILMN_1725441	0001440554	A	459	TCCAGGGGATGAGGAAGAGGCAGAGCTGGCAGATTCGAGTGGTCTCTACC	16	+	28871010-28871026:28873387-28873419	16p11.2e	Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (NFATC2IP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC138387; FLJ14639; MGC126790	
Homo sapiens	RefSeq	NM_032815.3	ILMN_17542	NFATC2IP	NM_032815.3	NM_032815.3		84901	46447822	NM_032815.3	NFATC2IP	NP_116204.3	ILMN_1708510	0002850189	I	1042	GAGACGTCCCAACAGCTCCAGCTCCGGGTGCAGGGAAAGGAGAAACACCA	16	+	28877848-28877897	16p11.2e	Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (NFATC2IP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC138387; FLJ14639; MGC126790	MGC138387; FLJ14639; MGC126790
Homo sapiens	RefSeq	XM_942299.1	ILMN_40531	LOC652690	XM_942299.1	XM_942299.1		652690	89063780	XM_942299.1	LOC652690	XP_947392.1	ILMN_1755176	0006980091	S	10	CAGGAAATAAGGAATAAAGGAAATGGAGGGATTAGTTGGGTGAAATGTCC					PREDICTED: Homo sapiens similar to Kazal type serine protease inhibitor 5-like 2 (LOC652690), mRNA.					
Homo sapiens	RefSeq	NM_147160.2	ILMN_139074	OPRS1	NM_147160.2	NM_147160.2		10280	22325389	NM_147160.2	OPRS1	NP_671516.1	ILMN_1716374	0006590114	I	276	TAGGGTTCCGAAGGCGCCATCCCCGGACCTAGGACCGGTGCCAGCCCTGA	9	-	34627443-34627490:34627491-34627492	9p13.3c	Homo sapiens opioid receptor, sigma 1 (OPRS1), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8954936] [evidence TAS]; A subcellular organelle of plant cells surrounded by 'half-unit' or a monolayer membrane instead of the more usual bilayer. A droplet of triacylglycerol surrounded by a monolayer of phospholipids, interacting with the triacylglycerols and the hydrophilic head groups facing the cytosol, and containing major protein components called oleosins [goid 12511] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The chemical reactions and pathways resulting in the formation of ergosterol, (22E)-ergosta-5,7,22-trien-3-beta-ol, a sterol found in ergot, yeast and moulds [goid 6696] [evidence IEA]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Catalysis of the reaction which results in unsaturation at C-7 in the B ring of sterols [goid 247] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 8954936] [evidence TAS]	SIGMAR1; MGC3851; FLJ25585; SR-BP1	SIGMAR1; MGC3851; FLJ25585; SR-BP1
Homo sapiens	RefSeq	NM_139013.1	ILMN_17267	MAPK14	NM_139013.1	NM_139013.1		1432	20986513	NM_139013.1	MAPK14	NP_620582.1	ILMN_1720656	0003290634	I	1260	GGGGATTTGAAGAAGAGTTTCTCCTTTTGACCAAATAAAGTACCATTAGT	6	+	36178461-36178510	6p21.31b	Homo sapiens mitogen-activated protein kinase 14 (MAPK14), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8846784] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9687510] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10912793] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10706854] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 7997261] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10706854] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10838079] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8846784] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9687510] [evidence EXP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 10706854] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9792677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17255097] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16751104] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12761180] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16636664] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 8339] [pmid 7997261] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p38; PRKM15; PRKM14; RK; SAPK2A; CSBP1; CSPB1; p38ALPHA; Mxi2; EXIP; CSBP2	p38; PRKM15; PRKM14; RK; SAPK2A; CSBP1; CSPB1; p38ALPHA; Mxi2; EXIP; CSBP2
Homo sapiens	RefSeq	NM_139013.1	ILMN_17267	MAPK14	NM_139013.1	NM_139013.1		1432	20986513	NM_139013.1	MAPK14	NP_620582.1	ILMN_2388090	0004860600	A	863	GGATTTTGGACTGGCTCGGCACACAGATGATGAAATGACAGGCTACGTGG	6	+	36151608-36151657	6p21.31b	Homo sapiens mitogen-activated protein kinase 14 (MAPK14), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8846784] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9687510] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10912793] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10706854] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 7997261] [evidence IDA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10706854] [evidence TAS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10838079] [evidence IDA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 8846784] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9687510] [evidence EXP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 10706854] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9792677] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17255097] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16751104] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12761180] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16636664] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 8339] [pmid 7997261] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p38; PRKM15; PRKM14; RK; SAPK2A; CSBP1; CSPB1; p38ALPHA; Mxi2; EXIP; CSBP2	p38; PRKM15; PRKM14; RK; SAPK2A; CSBP1; CSPB1; p38ALPHA; Mxi2; EXIP; CSBP2
Homo sapiens	RefSeq	XM_925879.1	ILMN_175889	LOC728636	XM_001130543.1	XM_001130543.1		728636	113425386	XM_001130543.1	LOC728636	XP_001130543.1	ILMN_1770531	0006180255	S	1124	CAGCTGGAAGGGGAGTGGAGACTATGGGACCTAGGAGCAACAGGTTTCAG	15	+	80896637-80896686	15q25.2a	PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a-like, transcript variant 3 (LOC728636), mRNA.					
Homo sapiens	RefSeq	NM_003649.2	ILMN_28549	DDO	NM_003649.2	NM_003649.2		8528	40217814	NM_003649.2	DDO	NP_003640.2	ILMN_1790329	0002490079	I	490	GGCTTTTACAACCCTGAAATGTGAATGCCCTGCCTACCTCCCGTGGTTGG	6	-	110832676-110832725	6q21g	Homo sapiens D-aspartate oxidase (DDO), transcript variant 1, mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid [goid 6533] [pmid 9163533] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 9163533] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 3884] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: D-aspartate + H2O + O2 = oxaloacetate + NH3 + H2O2 [goid 8445] [pmid 9163533] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 3884] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DDO-1; FLJ45203; DASOX; DDO-2	DDO-1; FLJ45203; DASOX; DDO-2
Homo sapiens	Unigene	Hs.542575	ILMN_106380	HS.542575	Hs.542575		Hs.542575		6711912	AW302235			ILMN_1885323	0001070280	S	327	CTGGGGACTGTACATATGCTGTGGACCATGCAGAACCTGGAGAGGCGGTG	21	+	34704456-34704505		xs04b01.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2768617 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001039725.1	ILMN_42853	PNPLA1	NM_001039725.1	NM_001039725.1		285848	89886440	NM_001039725.1	PNPLA1	NP_001034814.1	ILMN_2396801	0000940463	A	1414	CCAAAAAGCGCCGTGCCTCTGGTTCATGTGAAGGAAACCGTCAGCAAGCC	6	+	36382073-36382122	6p21.31a	Homo sapiens patatin-like phospholipase domain containing 1 (PNPLA1), transcript variant 2, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC119320; FLJ38755; MGC119319; MGC119321; dJ50J22.1	MGC119320; FLJ38755; MGC119319; MGC119321; dJ50J22.1
Homo sapiens	RefSeq	XM_945357.1	ILMN_138397	C16ORF50	XM_945357.1	XM_945357.1		84229	89040877	XM_945357.1	C16orf50	XP_950450.1	ILMN_1689710	0004490041	I	1608	GGTAACTGGGACCACTAGCGCACACCACCATGCCTGGCTAATTTCTTGTT				16q13d	PREDICTED: Homo sapiens chromosome 16 open reading frame 50, transcript variant 3 (C16orf50), mRNA.					
Homo sapiens	RefSeq	NM_001517.4	ILMN_9775	GTF2H4	NM_001517.4	NM_001517.4		2968	54144651	NM_001517.4	GTF2H4	NP_001508.1	ILMN_1800308	0001500609	S	1404	CAGACTCCGGTTCACTGAGGGTGTCCTGTATAACCAGTTCCTGTCGCAAG	6	+	30879467-30879516	6p21.33a	Homo sapiens general transcription factor IIH, polypeptide 4, 52kDa (GTF2H4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; A complex that contains kinase activity directed towards the C-terminal Domain (CTD) of the largest subunit of RNA polymerase II and is essential for initiation at RNA polymerase II promoters in vitro. In S. cerevisiae, it is composed of the 5-subunit core (Rad3p, Tfb1p, Tfb2p, Ssl1p and Tfb4p), Ssl2p, and TFIIK (Kin28p, Ccl1p, and Tfb3p). All of the subunits have equivalents in humans: the 5 subunit core is composed of XPD, p62, p55, p44, p34; the equivalent of the TFIIK subcomplex is composed of MO15, Mat1, and a cyclin; the human equivalent of Ssl2p is XPB [goid 5675] [pmid 9118947] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9118947] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9118947] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17466626] [evidence IPI]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]	TFIIH	TFIIH
Homo sapiens	RefSeq	NM_032900.4	ILMN_22028	ARHGAP19	NM_032900.4	NM_032900.4		84986	67906813	NM_032900.4	ARHGAP19	NP_116289.4	ILMN_1688953	0006110332	S	5097	GGCCAGCGAGGAGGTGTGGGACATAATAGCCTGAGTGCTTGGGTTACCAT	10	-	98983559-98983608	10q24.1b	Homo sapiens Rho GTPase activating protein 19 (ARHGAP19), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	MGC138804; MGC138805; MGC14258; DKFZp313K217	MGC138804; MGC138805; MGC14258; DKFZp313K217
Homo sapiens	RefSeq	XM_931173.1	ILMN_31858	LOC642930	XM_931173.1	XM_931173.1		642930	88961367	XM_931173.1	LOC642930	XP_936266.1	ILMN_1797794	0003400112	S	1929	GGTGTTTCAGCAAGTGCAGAGATGCCCAGGTGGTTGGGATTCAATACAAC	3	+	860685-860734		PREDICTED: Homo sapiens hypothetical protein LOC642930 (LOC642930), mRNA.					
Homo sapiens	RefSeq	NM_023931.2	ILMN_601	ZNF747	NM_023931.2	NM_023931.2		65988	34147348	NM_023931.2	ZNF747	NP_076420.1	ILMN_1762098	0004260451	S	2140	GCCTCTCAGATGGCTGTGACTACAGGTGGGCAACACTATGCCTGGTTAAT	16	-	30542960-30543009	16p11.2c	Homo sapiens zinc finger protein 747 (ZNF747), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	MGC2474	MGC2474
Homo sapiens	RefSeq	XM_496731.2	ILMN_41190	LOC441056	XM_496731.2	XM_496731.2		441056	88978387	XM_496731.2	LOC441056	XP_496731.1	ILMN_1662569	0002030167	S	940	AGCCCAGAGAGCGGCTTCCCGTTCCCGCGGGATCCCTGGAGAGGTCAGAA	4	+	191235802-191235851	4q35.2d	PREDICTED: Homo sapiens similar to double homeobox, 4 (LOC441056), mRNA.					
Homo sapiens	RefSeq	NM_181552.1	ILMN_172477	CUTL1	NM_181552.1	NM_181552.1		1523	31652239	NM_181552.1	CUTL1	NP_853530.1	ILMN_2278636	0006940402	I	5021	GTGATTTCCACAGGTTCTGGAATAACTCTTACAGCTTTGCCTTGTGTCCT	7	+	101679507-101679556	7q22.1e	Homo sapiens cut-like 1, CCAAT displacement protein (Drosophila) (CUTL1), transcript variant 1, mRNA.				p110; CASP; CUX; Nbla10317; p75; COY1; p200; p100; CDP	p110; CASP; CUX; Nbla10317; p75; COY1; p200; p100; CDP
Homo sapiens	RefSeq	NM_054031.2	ILMN_22080	MRGPRX3	NM_054031.2	NM_054031.2		117195	46048170	NM_054031.2	MRGPRX3	NP_473372.2	ILMN_1773546	0006620519	S	1305	TGTCGGGAAGCAGATTGGAGCAGTGAGGAAGAACCTCTGCCCTGTCAGAC	11	+	18116269-18116294:18116295-18116318	11p15.1d	Homo sapiens MAS-related GPR, member X3 (MRGPRX3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SNSR1; MRGX3; GPCR	SNSR1; MRGX3; GPCR
Homo sapiens	RefSeq	NM_172236.1	ILMN_9524	POFUT1	NM_172236.1	NM_172236.1		23509	27436890	NM_172236.1	POFUT1	NP_758436.1	ILMN_1782870	0004830497	A	340	GGCTTACCATCGGGTCATCAGCTTGGAGGATTTCATGGAGAAGCTGGCAC	20	+	30266777-30266826	20q11.21b	Homo sapiens protein O-fucosyltransferase 1 (POFUT1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11524432] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9023546] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose [goid 6004] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 11698403] [evidence NAS]; The stepwise addition of sugar residues to the initially added O-linked sugar (usually GalNAc) to form a core O-glycan structure [goid 16266] [pmid 11698403] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11698403] [evidence NAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor [goid 46922] [pmid 11698403] [evidence TAS]	O-Fuc-T; O-FUT; FUT12; O-FucT-1; MGC2482; KIAA0180	O-Fuc-T; O-FUT; FUT12; O-FucT-1; MGC2482; KIAA0180
Homo sapiens	RefSeq	NM_172236.1	ILMN_9524	POFUT1	NM_172236.1	NM_172236.1		23509	27436890	NM_172236.1	POFUT1	NP_758436.1	ILMN_2247360	0005570669	I	946	GACCATGGGCTTAGAAGGCAGACATTGGTTAGGAGGTGCAGGGAACATAC	20	+	30268826-30268875	20q11.21b	Homo sapiens protein O-fucosyltransferase 1 (POFUT1), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11524432] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9023546] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose [goid 6004] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 11698403] [evidence NAS]; The stepwise addition of sugar residues to the initially added O-linked sugar (usually GalNAc) to form a core O-glycan structure [goid 16266] [pmid 11698403] [evidence TAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11698403] [evidence NAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Catalysis of the transfer of an alpha-L-fucosyl residue from GDP- beta-L-fucose to the serine hydroxy group of a protein acceptor [goid 46922] [pmid 11698403] [evidence TAS]	O-Fuc-T; O-FUT; FUT12; O-FucT-1; MGC2482; KIAA0180	O-Fuc-T; O-FUT; FUT12; O-FucT-1; MGC2482; KIAA0180
Homo sapiens	Unigene	Hs.554328	ILMN_111896	HS.554328	Hs.554328		Hs.554328		5454392	AI832412			ILMN_1911696	0002760161	S	58	GGTGCCAGGAGAGCTTCAGAGTATGCCAGGAGAGCTTCAGTCTGTGTCAC	8	-	96891432-96891481		at68g07.x1 Barstead colon HPLRB7 Homo sapiens cDNA clone IMAGE:2377212 3, mRNA sequence					
Homo sapiens	RefSeq	XM_497386.2	ILMN_165630	LOC644734	XR_016118.1	XR_016118.1		644734	113424506	XR_016118.1	LOC644734		ILMN_1765341	0000620408	S	430	ATAAGAAAAGGTTGTAAAAGTTTGAATGCATCTAAGGTGCAGGAAGGAGG	14	-	18243260-18243309	14q11.1d	PREDICTED: Homo sapiens similar to Zinc finger protein 85 (Zinc finger protein HPF4) (HTF1) (LOC644734), mRNA.					
Homo sapiens	RefSeq	NM_021652.2	ILMN_25253	SMA4	NM_021652.2	NM_021652.2		11039	117320510	NM_021652.2	SMA4	NP_067684.2	ILMN_2133534	0004260672	S	524	GAGCGCGTATGGAGTGGAAACGCTTGTAGGGCTTCACCAGGTAAGCGGTG				5q13.2a	Homo sapiens SMA4 (SMA4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]	MGC22265	
Homo sapiens	RefSeq	XM_935871.1	ILMN_34112	LOC641801	XM_935871.1	XM_935871.1		641801	89027533	XM_935871.1	LOC641801	XP_940964.1	ILMN_1660241	0006200707	S	61	TGTGGACGGGAGCGACTGTGCGTGTCTCCCTCCCAAACTGGGGACACCCC					PREDICTED: Homo sapiens hypothetical protein LOC641801 (LOC641801), mRNA.					
Homo sapiens	RefSeq	XM_001713788.1	ILMN_336438	LOC100133468	XM_001713788.1	XM_001713788.1		100133468	169214995	XM_001713788.1	LOC100133468	XP_001713840.1	ILMN_3236801	0006380070	S	285	TCTTTTGGTCCAGACCCTCAAATCTTAAAAATAGCTTCAAGTTGTTAAGG					PREDICTED: Homo sapiens hypothetical protein LOC100133468 (LOC100133468), mRNA.					
Homo sapiens	RefSeq	NR_001525.1	ILMN_7190	TTTY4	NR_001525.1	NR_001525.1		114761	32563528	NR_001525.1	TTTY4		ILMN_2066116	0004490402	S	121	GGTGGAAAAAGAATTCACGTGGTGAAGTCAGTGACTAATCAGTGATGTAA	Y	+	23492110-23492150:23519163-23519171	Yq11.223c	Homo sapiens testis-specific transcript, Y-linked 4 (non-protein coding) (TTTY4), non-coding RNA.				TTY4; TTTY4A	TTY4; TTTY4A
Homo sapiens	Unigene	Hs.58423	ILMN_73150	HS.58423	Hs.58423		Hs.58423		34454984	CF455328			ILMN_1911420	0004250209	S	318	GGTAGCAGAAGCACTGAGGTCAGAGATGGGATTTCACTCAGCTACTCATC	7	+	39588802-39588851		AGENCOURT_15332205 Human Anterior Horn Homo sapiens cDNA clone IMAGE:30516367 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001001824.1	ILMN_16883	OR2T27	NM_001001824.1	NM_001001824.1		403239	49227790	NM_001001824.1	OR2T27	NP_001001824.1	ILMN_1656221	0005310669	S	464	ATGGTTTCTTGCTCACCCCCGTCACCATGCAGTTCCCCTTCTGTGCCTCT	1	-	248813672-248813721	1q44f	Homo sapiens olfactory receptor, family 2, subfamily T, member 27 (OR2T27), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_005026.2	ILMN_15406	PIK3CD	NM_005026.2	NM_005026.2		5293	19923288	NM_005026.2	PIK3CD	NP_005017.2	ILMN_1766275	0003360717	S	4829	AGCTCTGTTCTGATTCACCAGGGGTCCGTCAGTAGTCATTGCCACCCGCG	1	+	9711190-9711239	1p36.22d	Homo sapiens phosphoinositide-3-kinase, catalytic, delta polypeptide (PIK3CD), mRNA.	A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [pmid 9235916] [evidence NAS]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [pmid 9113989] [evidence NAS]	The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus [goid 1782] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9113989] [evidence NAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [pmid 9235916] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]	p110D	p110D
Homo sapiens	RefSeq	NM_006570.4	ILMN_26341	RRAGA	NM_006570.4	NM_006570.4		10670	57863286	NM_006570.4	RRAGA	NP_006561.1	ILMN_1783709	0006020564	S	1321	GGGCTTTGAAGTGTGTGCTGCTTACTCCTTTCATCTTTCTCCCCGCTTCC	9	+	19040692-19040741	9p22.1b	Homo sapiens Ras-related GTP binding A (RRAGA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8995684] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11073942] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9394008] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11073942] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 8995684] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 9394008] [evidence IDA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 8995684] [evidence IDA]; Interactions, directly with the host cell macromolecular machinery, to allow virus replication [goid 19048] [pmid 8995684] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cytolysis [goid 45919] [pmid 8995684] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 14660641] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 7499430] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 14660641] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 14660641] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11073942] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 14660641] [evidence IPI]; Interacting selectively with a phosphorylated protein [goid 51219] [pmid 8995684] [evidence IDA]	RAGA; FIP-1	RAGA; FIP-1
Homo sapiens	RefSeq	NM_173167.2	ILMN_28261	UNC45B	NM_001033576.1	NM_001033576.1		146862	75750483	NM_001033576.1	UNC45B	NP_001028748.1	ILMN_1698739	0000130538	A	5096	GATTTTTGCCACTGGGCTGCCTCCCATTGTCTGGCTAAGTCTTCATGGGA	17	+	30539900-30539949	17q12a	Homo sapiens unc-45 homolog B (C. elegans) (UNC45B), transcript variant 2, mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	UNC45; FLJ38610; MGC119541; MGC119540; CMYA4	UNC45; FLJ38610; MGC119541; MGC119540; CMYA4
Homo sapiens	RefSeq	NR_002224.1	ILMN_18291	ADAM6	NR_002224.1	NR_002224.1		8755	61175212	NR_002224.1	ADAM6		ILMN_2143210	0007040601	S	1244	GCACTCCTTGTGTTCATGGAAACTTCTGTAATAACGCCCAGTGCAATGTG	14	-	106436367-106436416	14q32.33d	Homo sapiens ADAM metallopeptidase domain 6 (pseudogene) (ADAM6), non-coding RNA.				tMDCIV; C14orf96	tMDCIV; C14orf96
Homo sapiens	RefSeq	NR_002224.1	ILMN_18291	ADAM6	NR_002224.1	NR_002224.1		8755	61175212	NR_002224.1	ADAM6		ILMN_1783312	0006480634	S	1547	GGACAGCCAAAAATGTGCGAACTATCAGGACCACCACCGTTAAGGAAGGG	14	-	106436064-106436113	14q32.33d	Homo sapiens ADAM metallopeptidase domain 6 (pseudogene) (ADAM6), non-coding RNA.				tMDCIV; C14orf96	tMDCIV; C14orf96
Homo sapiens	RefSeq	NM_000178.2	ILMN_23541	GSS	NM_000178.2	NM_000178.2		2937	30581166	NM_000178.2	GSS	NP_000169.1	ILMN_1683462	0000110474	S	1497	CCTGTGTGAGGGCACAACCAGGCCACGGGACCTTCTATCCTCTGTATTTG	20	-	33516589-33516630:33516631-33516638	20q11.22b	Homo sapiens glutathione synthetase (GSS), mRNA.		The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 8896573] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 465367] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8896573] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione [goid 4363] [pmid 7646467] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	MGC14098; GSHS	MGC14098; GSHS
Homo sapiens	RefSeq	XM_001126181.1	ILMN_173859	LOC727877	XM_001126181.1	XM_001126181.1		727877	113411823	XM_001126181.1	LOC727877	XP_001126181.1	ILMN_3236249	0005360544	S	1522	AGCGGGACCACCCTGGGCACAGCAGGCATCGGAGCTCCCCTGGGACCTGT	1	+	176226-176259:189926-189941		PREDICTED: Homo sapiens hypothetical LOC727877, transcript variant 2 (LOC727877), mRNA.					
Homo sapiens	RefSeq	XM_497788.2	ILMN_170819	LOC731432	XM_001129619.1	XM_001129619.1		731432	113431153	XM_001129619.1	LOC731432	XP_001129619.1	ILMN_1652209	0004150095	S	1	ATGTTTAATTCTGCCTTGGAAGTGGCCATATTTGAAGGTGCTGTGATTCA					PREDICTED: Homo sapiens similar to Ribosome biogenesis protein BMS1 homolog (LOC731432), mRNA.					
Homo sapiens	Unigene	Hs.552709	ILMN_111097	HS.552709	Hs.552709		Hs.552709		19024776	BM711518			ILMN_1830411	0000430092	S	241	TGGACATCCGGGAGAAATCCATAGTACTGGAGCTGGTTCAGAGCCCCACG	17	-	75436231-75436280		UI-E-CQ1-aex-j-05-0-UI.r1 UI-E-CQ1 Homo sapiens cDNA clone UI-E-CQ1-aex-j-05-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001035534.1	ILMN_8005	FAM129B	NM_001035534.1	NM_001035534.1		64855	79750823	NM_001035534.1	FAM129B	NP_001030611.1	ILMN_2294989	0002640356	I	14	AGCTCCGGTCCCTTCCTTTTGGGGCTCTCACTCTGGAGGATGGGGTGGAT	9	-	130341205-130341216:130341217-130341254	9q34.11a	Homo sapiens family with sequence similarity 129, member B (FAM129B), transcript variant 2, mRNA.				OC58; MEG-3; FLJ13518; FLJ22298; RP11-356B19.6; bA356B19.6; FLJ22151; DKFZP434H0820; C9orf88	OC58; MEG-3; FLJ13518; FLJ22298; RP11-356B19.6; bA356B19.6; FLJ22151; DKFZP434H0820; C9orf88
Homo sapiens	RefSeq	NM_001035534.1	ILMN_8005	FAM129B	NM_001035534.1	NM_001035534.1		64855	79750823	NM_001035534.1	FAM129B	NP_001030611.1	ILMN_2408576	0004070711	A	3521	CCTAGACCTGCTCCCCAGAGGAGGGGCCTTGACCCACAGGACGTGTGGTG	9	-	130267807-130267856	9q34.11a	Homo sapiens family with sequence similarity 129, member B (FAM129B), transcript variant 2, mRNA.				OC58; MEG-3; FLJ13518; FLJ22298; RP11-356B19.6; bA356B19.6; FLJ22151; DKFZP434H0820; C9orf88	OC58; MEG-3; FLJ13518; FLJ22298; RP11-356B19.6; bA356B19.6; FLJ22151; DKFZP434H0820; C9orf88
Homo sapiens	RefSeq	XR_038622.1	ILMN_349194	LOC100131510	XR_038622.1	XR_038622.1		100131510	169163123	XR_038622.1	LOC100131510		ILMN_3292114	0001190369	M	370	TGGGGGAGAGAGCAGGGAGTGGCTCAGGGAAAGAAGTGGAGTGTTGAGTC	2	-	25446612-25446661	2p23.3c	PREDICTED: Homo sapiens misc_RNA (LOC100131510), miscRNA.					
Homo sapiens	RefSeq	NM_178329.1	ILMN_2506	CCR3	NM_178329.1	NM_178329.1		1232	30581169	NM_178329.1	CCR3	NP_847899.1	ILMN_1763322	0002190671	A	1481	GCCTTCCACACTCACCTCTAAAACAGTCCTTCAAACTTCCAGTGCAACAC	3	+	46282781-46282830	3p21.31i	Homo sapiens chemokine (C-C motif) receptor 3 (CCR3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9302298] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9302298] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10201960] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9302298] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10713092] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10201960] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 10201960] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9302298] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]	CKR3; CMKBR3; MGC102841; CC-CKR-3; CD193	CKR3; CMKBR3; MGC102841; CC-CKR-3; CD193
Homo sapiens	RefSeq	XM_370557.4	ILMN_43543	FAM21D	XM_370557.4	XM_370557.4		653450	169190541	XM_370557.4	FAM21D	XP_370557.2	ILMN_3238452	0003710270	S	1039	GAACAGCTAGCTCATCTTTTACCCAATGTACTTAGTATTTTTCTGCACTG	10	+	50861578-50861627	10q11.23a	PREDICTED: Homo sapiens family with sequence similarity 21, member D (FAM21D), mRNA.					
Homo sapiens	RefSeq	XM_939093.1	ILMN_39988	FAM89A	XM_939093.1	XM_939093.1		375061	88952882	XM_939093.1	FAM89A	XP_944186.1	ILMN_1710075	0006280048	I	1076	TCCGAATGTAAACTAGTGTGCTAGAAAGCAAACCACCCGCCACTCAAACC				1q42.2a	PREDICTED: Homo sapiens family with sequence similarity 89, member A (FAM89A), mRNA.					
Homo sapiens	RefSeq	NM_032701.2	ILMN_19472	SUV420H2	NM_032701.2	NM_032701.2		84787	31543168	NM_032701.2	SUV420H2	NP_116090.2	ILMN_1735168	0002350424	S	2037	TGCAGCTGTCTGCGGTGGGGGGAAGGTTGGGGGGTGTCTGGAGGCATGTT	19	+	60551072-60551121	19q13.42b	Homo sapiens suppressor of variegation 4-20 homolog 2 (Drosophila) (SUV420H2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]	MGC2705; KMT5C	MGC2705; KMT5C
Homo sapiens	RefSeq	NM_014089.3	ILMN_174775	NUPL1	NM_014089.3	NM_014089.3		9818	56788375	NM_014089.3	NUPL1	NP_054808.1	ILMN_2378316	0005290537	A	1588	GTTACTACTGGACCCACTCCTTTCAGCACCATGCCAAACGCAGCAGCCGT	13	+	24803603-24803652	13q12.13a	Homo sapiens nucleoporin like 1 (NUPL1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PRO2463; KIAA0410	PRO2463; KIAA0410
Homo sapiens	Unigene	Hs.551128	ILMN_110497	HS.551128	Hs.551128		Hs.551128		33338085	AF176921			ILMN_1844593	0005900246	S	1014	CCTTCCTGCCTAGTGTGACTTTTGCCCCCAAGAGTGCCTGGACAGCATTC	8	+	32744198-32744247		Homo sapiens MSTP131 (MST131) mRNA, complete cds					
Homo sapiens	RefSeq	NM_003737.2	ILMN_12626	DCHS1	NM_003737.2	NM_003737.2		8642	73623031	NM_003737.2	DCHS1	NP_003728.1	ILMN_1739640	0001740646	S	10505	ACCAGGTCCAATGTGGGGAGAAATATGAAGGAGGTAGCAGCCCTGGGTTC	11	-	6642759-6642808	11p15.4c	Homo sapiens dachsous 1 (Drosophila) (DCHS1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 9199196] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CDH25; KIAA1773; PCDH16; FLJ11790; FIB1	CDH25; KIAA1773; PCDH16; FLJ11790; FIB1
Homo sapiens	RefSeq	NM_001005226.1	ILMN_183036	OR2B3P	NM_001005226.1	NM_001005226.1		442184	52421346	NM_001005226.1	OR2B3P	NP_001005226.1	ILMN_1748802	0005260762	S	428	GGATGGCAGCCTTCTCATGGCTCATTGGTTTCGGCAACTCAGTGCTGCAG	6	-	29162527-29162576	6p22.1a	Homo sapiens olfactory receptor, family 2, subfamily B, member 3 pseudogene (OR2B3P), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	6M1-1; OR6-14; 6M1-1*02; 6M1-1*01; OR6-4	6M1-1; OR6-14; OR2B3; 6M1-1*02; 6M1-1*01; OR6-4
Homo sapiens	RefSeq	NM_001005226.1	ILMN_183036	OR2B3P	NM_001005226.1	NM_001005226.1		442184	52421346	NM_001005226.1	OR2B3P	NP_001005226.1	ILMN_2122014	0002470301	S	681	AATCAGGTCAGCAGAAGGACGGCAAAAAGCATTTGGGACATGTGGGTCCC	6	-	29162274-29162323	6p22.1a	Homo sapiens olfactory receptor, family 2, subfamily B, member 3 pseudogene (OR2B3P), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	6M1-1; OR6-14; 6M1-1*02; 6M1-1*01; OR6-4	6M1-1; OR6-14; 6M1-1*02; 6M1-1*01; OR6-4
Homo sapiens	RefSeq	XM_940515.1	ILMN_174731	LOC730273	XM_001124203.1	XM_001124203.1		730273	113419660	XM_001124203.1	LOC730273	XP_001124203.1	ILMN_1728999	0005050605	S	420	ATTGTGCTCGCTCACTCCTGCTATCACCATGAGAACAAGCCCAGGCCAGA					PREDICTED: Homo sapiens hypothetical protein LOC730273 (LOC730273), mRNA.					
Homo sapiens	RefSeq	XM_496575.2	ILMN_41351	FLJ14082	XM_496575.3	XM_496575.3		80092	113413084	XM_496575.3	FLJ14082	XP_496575.2	ILMN_1814967	0002710768	A	3216	CGCACAGAGGGACCCAAACCCAAAAGGCCCAGACCCAAGGGAGACTGAAT	2	+	95561545-95561594	2q11.1c	PREDICTED: Homo sapiens hypothetical protein FLJ14082 (FLJ14082), mRNA.					
Homo sapiens	RefSeq	NM_001005489.1	ILMN_180486	OR5B17	NM_001005489.1	NM_001005489.1		219965	53828695	NM_001005489.1	OR5B17	NP_001005489.1	ILMN_1813882	0005290671	S	675	GAGGCACACAGGTAAGGGATACCAGAAGCCTTTATCTACCTGTGGTTCTC	11	-	58125818-58125867	11q12.1b	Homo sapiens olfactory receptor, family 5, subfamily B, member 17 (OR5B17), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR5B20P; OR11-237	OR5B20P; OR11-237
Homo sapiens	RefSeq	NM_003684.3	ILMN_26102	MKNK1	NM_003684.3	NM_003684.3		8569	34147650	NM_003684.3	MKNK1	NP_003675.2	ILMN_1750429	0006450278	I	2437	ATCGGTGTCTGCTGCTGTGTCCCCAGGTCTTGTGTGGGTGGCACAGATCT	1	-	46795909-46795958	1p33d	Homo sapiens MAP kinase interacting serine/threonine kinase 1 (MKNK1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9155018] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 9155018] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9155018] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9878069] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 9155018] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MNK1	MNK1
Homo sapiens	Unigene	Hs.544500	ILMN_107899	HS.544500	Hs.544500		Hs.544500		9510907	BE465132			ILMN_1866152	0000780064	S	283	GGTGAGAGTTGCCAGGGTGCTGTGAGCCAAGGGAGAAAGAGGATCTGCAC	6	+	97044735-97044784		hv75e09.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3179272 3, mRNA sequence					
Homo sapiens	RefSeq	XR_041872.1	ILMN_342795	FLJ14100	XR_041872.1	XR_041872.1		80093	169161484	XR_041872.1	FLJ14100		ILMN_3262015	0005260324	M	402	TAGAGGAATAGGACTGGGGTGCAGGACGCTTTCTCAGGCAACCGCCCCTT				1p36.33a	PREDICTED: Homo sapiens hypothetical protein FLJ14100 (FLJ14100), miscRNA.					
Homo sapiens	RefSeq	XR_041872.1	ILMN_342795	FLJ14100	XR_041872.1	XR_041872.1		80093	169161484	XR_041872.1	FLJ14100		ILMN_3185552	0001260754	A	95	CCCAGCGACACCGAGAGCCAAAACAGGGCAGAGTTTCTCAGAGGTGGCAC				1p36.33a	PREDICTED: Homo sapiens hypothetical protein FLJ14100 (FLJ14100), miscRNA.					
Homo sapiens	RefSeq	NM_019099.3	ILMN_9599	C1ORF183	NM_019099.3	NM_019099.3		55924	39545578	NM_019099.3	C1orf183	NP_061972.1	ILMN_1797301	0001300435	I	139	CGAACCCGACAAATGGGCGCATGACGATGGAGAGCAGGGAAATGGACTGC	1	-	112281834-112281864:112281865-112281883	1p13.2d	Homo sapiens chromosome 1 open reading frame 183 (C1orf183), transcript variant 1, mRNA.				FLJ31105	FLJ31105
Homo sapiens	RefSeq	NM_001042525.1	ILMN_174683	FRMPD2L1	NM_001042525.1	NM_001042525.1		728798	110346444	NM_001042525.1	FRMPD2L1	NP_001035990.1	ILMN_2274605	0003400494	I	6	AGAGAGGCAGGATTCCTGCTGACTCCAGGGGGACACCTGGCACCTCAGCT	10	-	48862560-48862609	10q11.22c	Homo sapiens FERM and PDZ domain containing 2 like 1 (FRMPD2L1), transcript variant 4, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	yX59F3.2; PDZD5A; PDZK5A	yX59F3.2; PDZD5A; PDZK5A
Homo sapiens	RefSeq	NM_031488.4	ILMN_30204	L3MBTL2	NM_031488.4	NM_031488.4		83746	51173749	NM_031488.4	L3MBTL2	NP_113676.2	ILMN_3307786	0000450670	S	3067	GGGGCCGTGAACACAGAACCCTCAAGACAAGGATGACAGAGCTGGAGGAC	22	+	39957096-39957145	22q13.2a	Homo sapiens l(3)mbt-like 2 (Drosophila) (L3MBTL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence NAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	H-l(3)mbt-l; L3MBT	H-l(3)mbt-l; L3MBT
Homo sapiens	RefSeq	NM_031488.4	ILMN_30204	L3MBTL2	NM_031488.4	NM_031488.4		83746	51173749	NM_031488.4	L3MBTL2	NP_113676.2	ILMN_2336109	0005870646	A	2895	CCTGAGTGTGCACTTTGGCTCTGCTACCTGCTCCTGAAGCCCCGCTAAAA	22	+	39956924-39956973	22q13.2a	Homo sapiens l(3)mbt-like 2 (Drosophila) (L3MBTL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence NAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	H-l(3)mbt-l; L3MBT	H-l(3)mbt-l; L3MBT
Homo sapiens	RefSeq	NM_001013005.1	ILMN_27061	HERC6	NM_017912.3	NM_017912.3		55008	61563741	NM_017912.3	HERC6	NP_060382.3	ILMN_1654639	0006860482	A	3462	GGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTG	4	+	89363822-89363871	4q22.1b	Homo sapiens hect domain and RLD 6 (HERC6), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	FLJ20637	FLJ20637
Homo sapiens	RefSeq	NM_152689.2	ILMN_307044	TMEM184A	NM_001097620.1	NM_001097620.1		202915	148276980	NM_001097620.1	TMEM184A	NP_001091089.1	ILMN_1815937	0000940674	S	4480	AGCTGTTGCACACTCACCTCCACACCCAACTCACAGGAAGCAAGGCTGGG	7	-	1583617-1583666	7p22.3b	Homo sapiens transmembrane protein 184A (TMEM184A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC9712; FLJ24011	FLJ24011
Homo sapiens	RefSeq	NM_198277.1	ILMN_9690	SLC37A2	NM_198277.1	NM_198277.1		219855	38093648	NM_198277.1	SLC37A2	NP_938018.1	ILMN_2201413	0000540201	S	1501	TGTCCCTGAGCAGAGGCAGCGGCTCTAGTATGGTCCTAACCCACCAGTGA	11	+	124461103-124461124:124461310-124461337	11q24.2a	Homo sapiens solute carrier family 37 (glycerol-3-phosphate transporter), member 2 (SLC37A2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]	pp11662; MGC71430; FLJ00171	pp11662; MGC71430; FLJ00171
Homo sapiens	Unigene	Hs.551137	ILMN_110502	HS.551137	Hs.551137		Hs.551137		27839616	BX115738			ILMN_1853631	0004920451	S	573	AGCCTTTGAGAGCAGGCAACCATCCAAGCTCATTCCACGAACCCAGAGAA	9	-	99703792-99703841		BX115738 Soares melanocyte 2NbHM Homo sapiens cDNA clone IMAGp998D07589, mRNA sequence					
Homo sapiens	RefSeq	XM_375359.2	ILMN_32563	BEAN	XM_375359.2	XM_375359.2		146227	89040471	XM_375359.2	BEAN	XP_375359.2	ILMN_1733066	0005220692	A	2313	CGGAGCTGAAAGGAATCCACCCAGAAGTTCTGTAGCATCCTGCGTGCAGC	16	+	65073833-65073882	16q21e	PREDICTED: Homo sapiens brain expressed, associated with Nedd4 (BEAN), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	XM_375359.2	ILMN_32563	BEAN	XM_375359.2	XM_375359.2		146227	89040471	XM_375359.2	BEAN	XP_375359.2	ILMN_1697923	0002370026	I	21	CCAACCTGTCTGGCTGTCCTTCCCTGACACCTCGTTTGTCTACCCTTCTC	16	+	65018140-65018189	16q21e	PREDICTED: Homo sapiens brain expressed, associated with Nedd4 (BEAN), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_024569.3	ILMN_10945	MPZL1	NM_024569.3	NM_024569.3		9019	46358425	NM_024569.3	MPZL1	NP_078845.3	ILMN_2386008	0007000431	A	2940	TGGTGAGCCTTTGCCACCATGAAAACCACATAGCTGACCAGGGCTGTGCT	1	+	166025834-166025883	1q24.2a	Homo sapiens myelin protein zero-like 1 (MPZL1), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9792637] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 10681522] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9792637] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9792637] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9792637] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	PZR; PZRa; PZRb; FLJ21047; PZR1b	PZR; PZRa; PZRb; FLJ21047; PZR1b
Homo sapiens	RefSeq	XM_001718274.1	ILMN_338444	LOC100132084	XM_001718274.1	XM_001718274.1		100132084	169208303	XM_001718274.1	LOC100132084	XP_001718326.1	ILMN_3238462	0005820605	S	184	CTTCAGCTTGGCCTTGAACCCTCACACGGACATTTTACTCTCACCTCTGG	15	+	82844802-82844851	15q25.2b	PREDICTED: Homo sapiens hypothetical LOC100132084 (LOC100132084), mRNA.					
Homo sapiens	RefSeq	NM_138336.1	ILMN_4252	MYEOV2	NM_138336.1	NM_138336.1		150678	19923882	NM_138336.1	MYEOV2	NP_612209.1	ILMN_1791171	0003450768	S	495	GTGTGGCACCAACAAAGCAACAAGTGAGGGGAAAATGGGCACAGGACGCT	2	-	241066194-241066243	2q37.3e	Homo sapiens myeloma overexpressed 2 (MYEOV2), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NM_001011552.1	ILMN_21811	SLC9A4	NM_001011552.1	NM_001011552.1		389015	58531220	NM_001011552.1	SLC9A4	NP_001011552.1	ILMN_2112730	0003130360	S	3735	GTGCCATGCTGGTGTGCTGCACCCGCTAACTCGTCATCTAGCATTAGGTG	2	+	102516460-102516509	2q12.1a	Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 4 (SLC9A4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NHE4; DKFZp313B031	NHE4; DKFZp313B031
Homo sapiens	Unigene	Hs.123278	ILMN_75927	HS.123278	Hs.123278		Hs.123278		27881349	BX118370			ILMN_1893228	0005090102	S	456	GCTCTTGCTGTGATGGGCTTACATGGTAGGGGGCAGATAAAGGGGTAAGC	3	-	189131132-189131181		BX118370 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998P183859, mRNA sequence					
Homo sapiens	RefSeq	NR_003212.1	ILMN_164760	SNORD114-19	NR_003212.1	NR_003212.1		767597	115392019	NR_003212.1	SNORD114-19		ILMN_3309654	0005080189	S	22	GGCATATGAATCTTGGATAATGGATGATACGTGTGTGGAACTCTGAGGTC	14	+	100512588-100512637	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 114-19 (SNORD114-19), small nucleolar RNA.				14q(II-19)	14q(II-19)
Homo sapiens	RefSeq	NM_199131.1	ILMN_26858	VAX1	NM_199131.1	NM_199131.1		11023	40217621	NM_199131.1	VAX1	NP_954582.1	ILMN_1771058	0000650593	S	4092	GGGAAGGTCTTTTATAAACTCAATGGGGACCACCTTCCTGGAGAGGCTGC	10	-	118878374-118878423	10q25.3b	Homo sapiens ventral anterior homeobox 1 (VAX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MGC126745; MGC126743	MGC126745; MGC126743
Homo sapiens	RefSeq	NM_014791.2	ILMN_161976	MELK	NM_014791.2	NM_014791.2		9833	41281490	NM_014791.2	MELK	NP_055606.1	ILMN_1731184	0002340392	S	1983	GTGCCAGCTTCAAAAACCCGATGTGGTGGGTATCAGGAGGCAGCGGCTTA	9	+	36633149-36633197:36641743-36641743	9p13.2b	Homo sapiens maternal embryonic leucine zipper kinase (MELK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17280616] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA0175; HPK38	KIAA0175; HPK38
Homo sapiens	RefSeq	NM_014791.2	ILMN_161976	MELK	NM_014791.2	NM_014791.2		9833	41281490	NM_014791.2	MELK	NP_055606.1	ILMN_2212909	0000160097	S	2096	TGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTGTGATACAGCCTAC	9	+	36641807-36641856	9p13.2b	Homo sapiens maternal embryonic leucine zipper kinase (MELK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17280616] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	KIAA0175; HPK38	KIAA0175; HPK38
Homo sapiens	RefSeq	NM_175078.1	ILMN_26026	KRT77	NM_175078.1	NM_175078.1		374454	45597457	NM_175078.1	KRT77	NP_778253.1	ILMN_1801428	0002570180	S	2684	TGAACAGACAAGCAAGTTCTGCTTCTGTCCTGTTTCCTCCTGACAGCTCC	12	-	51370248-51370297	12q13.13d	Homo sapiens keratin 77 (KRT77), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	K1B; MGC148087; KRT1B	K1B; MGC148087; KRT1B
Homo sapiens	Unigene	Hs.566008	ILMN_118397	HS.566008	Hs.566008		Hs.566008		6142372	AW138054			ILMN_1902202	0000620475	S	71	gacaaaatACCATTTTCTTTCCAGACACACATTCTCCCCTCCACAGATTC	4	+	185536476-185536525		UI-H-BI1-abw-c-08-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2713334 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006270.2	ILMN_23748	RRAS	NM_006270.3	NM_006270.3		6237	142348070	NM_006270.3	RRAS	NP_006261.1	ILMN_1780825	0004570670	S	825	CATACCCACCCTTACTTCCTGGCCTCTTCTGGGCTACTGCCACTGTGTGC	19	-	54830472-54830521	19q13.33b	Homo sapiens related RAS viral (r-ras) oncogene homolog (RRAS), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 3098437] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 3098437] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NR_001560.1	ILMN_10242	CYCSP52	NR_001560.1	NR_001560.1		360155	33563316	NR_001560.1	CYCSP52		ILMN_3240354	0003840040	S	32	GTGTTCAGAAGTGTGCCCAGTGCCACACTGTGGAAAAGGGAGGCAAGCAC	1	+	155364809-155364858	1q23.1b	Homo sapiens cytochrome c, somatic pseudogene 52 (CYCSP52), non-coding RNA.				HC6; HCP2	HC6; HCP2
Homo sapiens	Unigene	Hs.543364	ILMN_106969	HS.543364	Hs.543364		Hs.543364		4222157	AI392610			ILMN_1895384	0007210465	S	413	CCAGAGAAATGATATCTGGGGCCGGTAATTGAGCAGGCCTATCTCCACCA					tg40e06.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2111266 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001141936.1	ILMN_370577	C4ORF48	NM_001141936.1	NM_001141936.1		401115	213513323	NM_001141936.1	C4orf48	NP_001135408.1	ILMN_3239531	0007650703	S	211	CTGCTGGGCGCCCGGGCCCGCGCCGAGCCCGCCGGGAGTGCCGTCCCCGC	4	+	2044157-2044206	4p16.3b	Homo sapiens chromosome 4 open reading frame 48 (C4orf48), mRNA.					
Homo sapiens	RefSeq	NM_017856.1	ILMN_162413	GEMIN8	NM_001042479.1	NM_001042479.1		54960	109715863	NM_001042479.1	GEMIN8	NP_001035944.1	ILMN_1748116	0004850682	S	1486	CTTTGGCACTGCAAGCCACACGGTCAGTGTTGTGACTACTCAACCCTCCC	X	-	14026480-14026529	Xp22.2	Homo sapiens gem (nuclear organelle) associated protein 8 (GEMIN8), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16434402] [evidence IDA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17023415] [evidence IDA]; A protein complex that contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and Unrip proteins; the complex is found in the cytoplasm and in nuclear Gems, and is involved in spliceosomal snRNP assembly in the cytoplasm and in pre-mRNA splicing in the nucleus [goid 32797] [pmid 16434402] [evidence IDA]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 16434402] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17023415] [evidence IPI]	FLJ43072; FLJ20514; FAM51A1	Gemin8; FLJ43072; FLJ20514
Homo sapiens	RefSeq	NM_001004128.2	ILMN_17337	QSOX1	NM_001004128.2	NM_001004128.2		5768	52493188	NM_001004128.2	QSOX1	NP_001004128.1	ILMN_2411282	0002850021	A	2454	CTCCAGGTTTCACCTTCCAGTGTGCAGAAGTTAGAAGGGTCTGGCGGGGG	1	+	178433663-178433712	1q25.2c	Homo sapiens quiescin Q6 sulfhydryl oxidase 1 (QSOX1), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10708601] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 17331072] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; Oxidation of two organic sulfhydryl groups (thiols) by a disulfide compound to form a disulfide bond [goid 6467] [pmid 17331072] [evidence IGI]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 4 R'C(R)SH + O2 = 2 R'C(R)S-S(R)CR' + 2 H2O [goid 16972] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the formation of disulfide bridges [goid 16971] [pmid 17331072] [evidence IGI]	QSCN6; FLJ34858; Q6; QSOX1	QSCN6; FLJ34858; Q6; QSOX1
Homo sapiens	RefSeq	NM_003754.1	ILMN_24320	EIF3F	NM_003754.2	NM_003754.2		8665	83656778	NM_003754.2	EIF3F	NP_003745.1	ILMN_1694398	0007210082	S	704	CTGGGAGGACCATGGGAGTGATGTTCACGCCTCTGACAGTGAAATACGCG	11	+	7972566-7972615	11p15.4b	Homo sapiens eukaryotic translation initiation factor 3, subunit F (EIF3F), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; A complex of several polypeptides that plays at least two important roles in protein synthesis: First, eIF3 binds to the 40S ribosome and facilitates loading of the Met-tRNA/eIF2.GTP ternary complex to form the 43S preinitiation complex. Subsequently, eIF3 apparently assists eIF4 in recruiting mRNAs to the 43S complex [goid 5852] [pmid 9341143] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 9341143] [evidence TAS]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 9341143] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	EIF3S5; eIF3-p47; eIF3f	eIF3-p47
Homo sapiens	RefSeq	XM_001732812.1	ILMN_334628	LOC649941	XM_001732812.1	XM_001732812.1		649941	169218308	XM_001732812.1	LOC649941	XP_001732864.1	ILMN_3275199	0001410497	M	1015	GAAGCCTCCGCGCAGCAGGGGCAGATGCAAGGTATGCTGACGCCATCCCT					PREDICTED: Homo sapiens similar to putative DUX4 protein (LOC649941), mRNA.					
Homo sapiens	RefSeq	NM_014392.2	ILMN_173747	D4S234E	NM_001040101.1	NM_001040101.1		27065	91932787	NM_001040101.1	D4S234E	NP_001035190.1	ILMN_1772627	0002750475	S	2347	TTGGCGCAGCGGTGTGCATCAGAGGCGTGTGCTGAGAAGGGTGGTGTTAA	4	+	4420537-4420586	4p16.2b	Homo sapiens DNA segment on chromosome 4 (unique) 234 expressed sequence (D4S234E), transcript variant 2, mRNA.				NEEP21; D4S234; P21; NSG1	NEEP21; D4S234; P21; NSG1
Homo sapiens	RefSeq	NM_020989.2	ILMN_11889	CRYGC	NM_020989.2	NM_020989.2		1420	13377000	NM_020989.2	CRYGC	NP_066269.1	ILMN_2113417	0004260300	S	380	CTGCGGCTGTACGAGAGGGAAGACCACAAAGGCCTCATGATGGAGCTGAG	2	-	208701378-208701427	2q33.3d	Homo sapiens crystallin, gamma C (CRYGC), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence NAS]	CRYG3; CCL	CRYG3; CCL
Homo sapiens	RefSeq	NM_175908.3	ILMN_10523	LOC284296	NM_175908.3	NM_175908.3		284296	40255204	NM_175908.3	LOC284296	NP_787104.2	ILMN_1660913	0005860255	S	3663	CTCCAGCTGCCGGGATTTGGGGGTCTGGGCCTTTCAGCTTTTTTATCCCC	19	-	60632410-60632459	19q13.42b-q13.42c	Homo sapiens hypothetical protein LOC284296 (LOC284296), mRNA.					
Homo sapiens	RefSeq	NM_017666.2	ILMN_3600	ZNF280C	NM_017666.2	NM_017666.2		55609	42476026	NM_017666.2	ZNF280C	NP_060136.1	ILMN_1696698	0005220112	S	2950	CAGATCTTGGGGAGAGTCCCTTCCTACCTGACTGACCTCCCATAAGGCTG	X	-	129166000-129166049	Xq25h	Homo sapiens zinc finger protein 280C (ZNF280C), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZNF633; FLJ20095; SUHW3	ZNF633; FLJ20095; SUHW3
Homo sapiens	RefSeq	NM_017666.2	ILMN_3600	ZNF280C	NM_017666.2	NM_017666.2		55609	42476026	NM_017666.2	ZNF280C	NP_060136.1	ILMN_2061310	0000770037	S	4231	ACTTGTCCAGACCATTAGACATTATTACATGCTCTGTCTTGGGCCTATCA	X	-	129164719-129164768	Xq25h	Homo sapiens zinc finger protein 280C (ZNF280C), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZNF633; FLJ20095; SUHW3	ZNF633; FLJ20095; SUHW3
Homo sapiens	RefSeq	XM_930798.1	ILMN_41490	LOC642393	XM_930798.1	XM_930798.1		642393	88943978	XM_930798.1	LOC642393	XP_935891.1	ILMN_1811866	0002260402	I	494	CCACATTTATCCTTCAGCATCCTGCCTGGAAGTCCTCTGCTGTGCCACCC	1	-	112046-112095		PREDICTED: Homo sapiens similar to mitochondrial ribosomal protein L20, transcript variant 4 (LOC642393), mRNA.					
Homo sapiens	RefSeq	NM_032188.1	ILMN_5326	MYST1	NM_032188.1	NM_032188.1		84148	14149874	NM_032188.1	MYST1	NP_115564.1	ILMN_1804679	0004060041	S	1341	GCCTCAAGTGGGCACCCCCCAAGCACAAGCAAGTCAAGCTCTCCAAGAAG	16	+	31050029-31050078	16p11.2c	Homo sapiens MYST histone acetyltransferase 1 (MYST1), transcript variant 1, mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11742995] [evidence IDA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11742995] [evidence IDA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [pmid 11742995] [evidence IDA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte, megakaryocyte, thrombocyte, or erythrocyte lineages [goid 30099] [pmid 11742995] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 11742995] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 11965546] [evidence IDA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone [goid 4402] [pmid 11742995] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 11742995] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 11965546] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of an acetyl group to an acceptor molecule [goid 16407] [pmid 11742995] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14040; MOF; KAT8; hMOF	FLJ14040; MOF; KAT8; hMOF
Homo sapiens	RefSeq	XR_039006.1	ILMN_340832	LOC100131810	XR_039006.1	XR_039006.1		100131810	169162050	XR_039006.1	LOC100131810		ILMN_3282745	0003850653	M	827	TTAGGAATGTCAAGGTCGTGAGAGCAGCACTTGAGGCATGTCAGCAGGGC					PREDICTED: Homo sapiens misc_RNA (LOC100131810), miscRNA.					
Homo sapiens	RefSeq	NM_052857.3	ILMN_23839	ZNF830	NM_052857.3	NM_052857.3		91603	145309297	NM_052857.3	ZNF830	NP_443089.3	ILMN_3247592	0002320593	S	1097	GAGGGGGAACTACAGGATTTGTTGTCTCAGGATTGGAGGGTGAAAGGGGC	17	+	30313758-30313807	17q12a	Homo sapiens zinc finger protein 830 (ZNF830), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation [goid 1832] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC20398	MGC20398
Homo sapiens	Unigene	Hs.164030	ILMN_79942	HS.164030	Hs.164030		Hs.164030		19043066	BM722470			ILMN_1883445	0000130114	S	186	GGGAAATGGCACCACCATGGGCATAGTTGCTCAAGCTAGAAGGATGGGGG	12	+	44956624-44956673		UI-E-EO0-ahx-p-21-0-UI.r1 UI-E-EO0 Homo sapiens cDNA clone UI-E-EO0-ahx-p-21-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_005333.2	ILMN_1794	HCCS	NM_005333.2	NM_005333.2		3052	62751774	NM_005333.2	HCCS	NP_005324.2	ILMN_1707236	0002970762	S	1726	GTAACTCTGCTCCCAACAAACAGGTCTCCTCATTGTCCTTGGCATTTGAC	X	+	11050541-11050590	Xp22.2	Homo sapiens holocytochrome c synthase (cytochrome c heme-lyase) (HCCS), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11827457] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 8661044] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 8661044] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 8661044] [evidence TAS]	Catalysis of the reaction: holocytochrome c = apocytochrome c + heme [goid 4408] [pmid 8661044] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MCOPS7; DKFZp779I1858; CCHL	MCOPS7; DKFZp779I1858; CCHL
Homo sapiens	RefSeq	NM_016627.4	ILMN_29189	AMZ2	NM_001033569.1	NM_001033569.1		51321	75812967	NM_001033569.1	AMZ2	NP_001028741.1	ILMN_1801606	0000510328	A	996	CGGCGCCCTCTAAACCTTTGCCCTATCTGTTTGCACAAGTTGCAGTGTGC	17	+	63763532-63763581	17q24.2c	Homo sapiens archaelysin family metallopeptidase 2 (AMZ2), transcript variant 2, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_153183.1	ILMN_7994	NUDT10	NM_153183.2	NM_153183.2		170685	142352410	NM_153183.2	NUDT10	NP_694853.1	ILMN_1653274	0006980014	S	1345	GCTTGAGCCCAGGAGCTTTAGTCTAGCCTGAGCAATATAATGAGACTCCG	X	+	51079721-51079770	Xp11.22c	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 10 (NUDT10), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: diphospho-myo-inositol polyphosphate + H2O = myo-inositol polyphosphate + phosphate [goid 8486] [evidence ISS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	hDIPP3alpha; DIPP3a	hDIPP3alpha; DIPP3a
Homo sapiens	RefSeq	NM_004259.4	ILMN_22518	RECQL5	NM_004259.5	NM_004259.5		9400	148612815	NM_004259.5	RECQL5	NP_004250.4	ILMN_1697682	0000670079	I	3512	TCAGATCCTCCACCCACTCCCCCATCCATTACGATGCCAGCTTCCAGCCT	17	-	73623072-73623121	17q25.1c	Homo sapiens RecQ protein-like 5 (RECQL5), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10710432] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10710432] [evidence NAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9878247] [evidence TAS]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA helix [goid 3678] [pmid 10710432] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	FLJ90603; RECQ5	FLJ90603; RECQ5
Homo sapiens	RefSeq	NM_019897.1	ILMN_11641	OR2S2	NM_019897.1	NM_019897.1		56656	10092668	NM_019897.1	OR2S2	NP_063950.1	ILMN_1801748	0000540523	S	566	GCATGGAGGTGACGAATGTGATCTTCCTAGGAGTCCCGGTTCTGTTCATC	9	-	35947450-35947499	9p13.3a	Homo sapiens olfactory receptor, family 2, subfamily S, member 2 (OR2S2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 10452948] [evidence TAS]	OST715; OR37A	OST715; OR37A
Homo sapiens	RefSeq	XM_940297.1	ILMN_37066	YDD19	XM_940297.1	XM_940297.1		11049	89036961	XM_940297.1	YDD19	XP_945390.1	ILMN_1709310	0006420128	S	146	TAGAGCCGCTTGGCTTCACGCTCCGCAAGCATGGAACAGCCCTCACCACA				13q12.12b	PREDICTED: Homo sapiens YDD19 protein (YDD19), mRNA.					
Homo sapiens	RefSeq	NM_004486.4	ILMN_3191	GOLGA2	NM_004486.4	NM_004486.4		2801	47078236	NM_004486.4	GOLGA2	NP_004477.3	ILMN_1738821	0004040292	S	3921	CCATCTTCTTACACAGAGAGGCAGCTGAGGCAGGACAGTGGGGCTAACTG	9	-	131018397-131018446	9q34.11b	Homo sapiens golgi autoantigen, golgin subfamily a, 2 (GOLGA2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15229288] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15194699] [evidence IPI]	MGC20672; GM130	MGC20672; GM130
Homo sapiens	RefSeq	XR_037137.1	ILMN_347328	LOC731157	XR_037137.1	XR_037137.1		731157	169168224	XR_037137.1	LOC731157		ILMN_3227210	0002680075	A	386	GAATGTCTGCTTATTCGTGTCTCTTACTAGGTTCAATTTCTTGGAGGCCG				5q14.3g	PREDICTED: Homo sapiens misc_RNA (LOC731157), miscRNA.					
Homo sapiens	RefSeq	NM_024519.2	ILMN_17641	FAM65A	NM_024519.2	NM_024519.2		79567	39995079	NM_024519.2	FAM65A	NP_078795.2	ILMN_1680037	0006480092	S	3975	GGCTTGGCCACCCTGCCGCTGCCCAGCCACATCCCTTGGTTTTGTATTTT	16	+	66138095-66138144	16q22.1b	Homo sapiens family with sequence similarity 65, member A (FAM65A), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ13725; KIAA1930	FLJ13725; KIAA1930
Homo sapiens	RefSeq	XM_001718034.1	ILMN_338526	LOC100133817	XM_001718034.1	XM_001718034.1		100133817	169211633	XM_001718034.1	LOC100133817	XP_001718086.1	ILMN_3238534	0002470594	S	592	TGGGTGGGTGCCAGCTTCCCTGAGACATTCCGTGCCTGTGACATTGCTGT					PREDICTED: Homo sapiens hypothetical protein LOC100133817 (LOC100133817), mRNA.					
Homo sapiens	Unigene	Hs.408455	ILMN_90099	HS.408455	Hs.408455		Hs.408455		31874175	BX538057			ILMN_1910948	0006770615	S	4192	GAGGTCAGCTCACCACACCCAGACTAAAGTCACTGGGCTCTGTGCGTGTC					Homo sapiens mRNA; cDNA DKFZp686J1595 (from clone DKFZp686J1595)					
Homo sapiens	RefSeq	NM_003220.2	ILMN_17128	TFAP2A	NM_003220.2	NM_003220.2		7020	109389359	NM_003220.2	TFAP2A	NP_003211.1	ILMN_2282477	0007570450	I	207	GGTGCGAGACCGAGAGGGGCATATCCGTTCACGCCGATCCATGAAAATGC	6	-	10523200-10523204:10523205-10523249	6p24.3a	Homo sapiens transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) (TFAP2A), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12586840] [evidence IMP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8321221] [evidence TAS]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [pmid 8661133] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1916817] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 8321221] [evidence TAS]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [pmid 12072434] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]	TFAP2; AP-2; AP2TF; AP-2alpha	TFAP2; AP-2; AP2TF; AP-2alpha
Homo sapiens	RefSeq	NM_148888.1	ILMN_13770	CCL25	NM_005624.2	NM_005624.2		6370	22538795	NM_005624.2	CCL25	NP_005615.2	ILMN_1737817	0001110075	A	773	GTGTGTCCCTCTGGGTCCCTCCAAAACTCTGGTCAGTTCAAGGATGCCCC	19	+	8033429-8033478	19p13.2e	Homo sapiens chemokine (C-C motif) ligand 25 (CCL25), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9285413] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10640743] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10640743] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10544196] [evidence TAS]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 9285413] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10640743] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	SCYA25; Ckb15; TECK; MGC150327	SCYA25; Ckb15; TECK
Homo sapiens	RefSeq	NM_005624.2	ILMN_13770	CCL25	NM_005624.2	NM_005624.2		6370	22538795	NM_005624.2	CCL25	NP_005615.2	ILMN_1782596	0006900242	I	218	AGGTGTGTGGGAACCCCAAAAGCAGGGAGGTGCAGAGAGCCATGAAGCTC	19	+	8027276-8027325	19p13.2e	Homo sapiens chemokine (C-C motif) ligand 25 (CCL25), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9285413] [evidence TAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10640743] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10640743] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10544196] [evidence TAS]; The movement of leukocytes within or between different tissues and organs of the body [goid 50900] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 9285413] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10640743] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [evidence IEA]	SCYA25; Ckb15; TECK; MGC150327	SCYA25; Ckb15; TECK; MGC150327
Homo sapiens	Unigene	Hs.554211	ILMN_111844	HS.554211	Hs.554211		Hs.554211		7280563	AW593305			ILMN_1860911	0007210451	S	381	ACAGCTTCAAAGGTTTCCTGGGGGGTCACCAGCCCGATTGGAGTTGCACT	20	-	56727230-56727279		hg12h07.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2945437 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001718400.1	ILMN_353206	LOC100133142	XM_001718400.1	XM_001718400.1		100133142	169213430	XM_001718400.1	LOC100133142	XP_001718452.1	ILMN_3249629	0005090128	S	4713	CCCAGAGTACTTCAGTACAGAAACTTGAAGATGAGGCCAGGTGCAGTGGC	19	+	60821401-60821450	19q13.42c	PREDICTED: Homo sapiens similar to hCG2008267 (LOC100133142), mRNA.					
Homo sapiens	RefSeq	NM_018384.3	ILMN_27010	GIMAP5	NM_018384.3	NM_018384.3		55340	55774984	NM_018384.3	GIMAP5	NP_060854.2	ILMN_1769383	0005360079	S	1582	GATAGAACCTGTCTTCCTCCCTGGCATTGTGGGGTCTGGGCGTGACACTG	7	+	150071390-150071439	7q36.1c	Homo sapiens GTPase, IMAP family member 5 (GIMAP5), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	HIMAP3; IAN5; FLJ11296; hIAN5; IAN4L1; IMAP3; IAN4	HIMAP3; IAN5; FLJ11296; hIAN5; IAN4L1; IMAP3; IAN4
Homo sapiens	RefSeq	XR_036963.1	ILMN_345793	LOC100132947	XR_036963.1	XR_036963.1		100132947	169178704	XR_036963.1	LOC100132947		ILMN_3232995	0006980022	I	1470	TCTCAGGGCCCACCGCATCAAGGAGACAGAAAGAAGCAAAGGAAGGACCT				9q12g	PREDICTED: Homo sapiens misc_RNA (LOC100132947), miscRNA.					
Homo sapiens	RefSeq	XM_942831.1	ILMN_40474	LOC401074	XM_942831.2	XM_942831.2		401074	113415119	XM_942831.2	LOC401074	XP_947924.1	ILMN_1813179	0005130246	A	1700	GGATGAATGCCTCAAGGGGCTCACACAACTCGTTCCAGGACTTAGTGACC				3p12.3d	PREDICTED: Homo sapiens hypothetical LOC401074 (LOC401074), mRNA.					
Homo sapiens	RefSeq	NM_144633.2	ILMN_25904	KCNH8	NM_144633.2	NM_144633.2		131096	27886666	NM_144633.2	KCNH8	NP_653234.2	ILMN_1775348	0003120129	S	4786	CTCAGGGGAAGCCTCAGAGATTACACAGTTAGGATGCTGACACAGTCTAG	3	+	19529742-19529791	3p24.3c	Homo sapiens potassium voltage-gated channel, subfamily H (eag-related), member 8 (KCNH8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	elk3; ELK1; Kv12.1; ELK	elk3; ELK1; Kv12.1; ELK
Homo sapiens	RefSeq	XM_936344.1	ILMN_42324	LOC642187	XM_936344.1	XM_936344.1		642187	89025739	XM_936344.1	LOC642187	XP_941437.1	ILMN_1671258	0003440221	S	34	GGTCGTTCCGCCATTAGTGAGGCGGTTACCCCAGAATACACCAGCGCATG					PREDICTED: Homo sapiens similar to ribosomal protein L31 (LOC642187), mRNA.					
Homo sapiens	RefSeq	NM_173641.2	ILMN_16282	EPHA10	NM_173641.2	NM_173641.2		284656	150456468	NM_173641.2	EPHA10	NP_775912.2	ILMN_3307321	0001190292	A	580	ACCTGGGTGAGCGCAAGATGAAGCTGAACACAGAGGTGCGCGAGATCGGA	1	-	38227383-38227432	1p34.3b	Homo sapiens EPH receptor A10 (EPHA10), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC43817; FLJ33655; FLJ16103	MGC43817; FLJ33655; FLJ16103
Homo sapiens	RefSeq	NM_173641.2	ILMN_16282	EPHA10	NM_173641.2	NM_173641.2		284656	150456468	NM_173641.2	EPHA10	NP_775912.2	ILMN_3307616	0005290402	I	1897	CCCTGGGGGAGATCCTTCATGTTGAGGGTTTTGCTGGGTTCTCAGGCTAG	1	-	38226066-38226115	1p34.3b	Homo sapiens EPH receptor A10 (EPHA10), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC43817; FLJ33655; FLJ16103	MGC43817; FLJ33655; FLJ16103
Homo sapiens	RefSeq	NM_173641.1	ILMN_16282	EPHA10	NM_173641.2	NM_173641.2		284656	150456468	NM_173641.2	EPHA10	NP_775912.2	ILMN_1663263	0001400088	I	1942	GCTAGTGGGGGCATTAGGAACAGACCTCTCATTCTCTCTCTTGCCTGTGG	1	-	38226021-38226070	1p34.3b	Homo sapiens EPH receptor A10 (EPHA10), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC43817; FLJ33655; FLJ16103	MGC43817; FLJ33655; FLJ16103
Homo sapiens	RefSeq	NM_006817.3	ILMN_174781	ERP29	NM_006817.3	NM_006817.3		10961	77628146	NM_006817.3	ERP29	NP_006808.1	ILMN_2251184	0000830730	I	295	GTTCGACACCCAGTACCCCTACGGTGAGAAGCAGGATGAGTTCAAGCGTC	12	+	110941975-110942024	12q24.13a	Homo sapiens endoplasmic reticulum protein 29 (ERP29), transcript variant 1, mRNA.	The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9738895] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The regulated release of proteins from a cell or group of cells [goid 9306] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9738895] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 9738895] [evidence TAS]; The regulated release of proteins from a cell or group of cells [goid 9306] [evidence IEA]	Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins [goid 3756] [pmid 9738895] [evidence TAS]	C12orf8; PDI-DB; ERp31; ERp28	C12orf8; PDI-DB; ERp31; ERp28
Homo sapiens	RefSeq	NM_024756.1	ILMN_2294	MMRN2	NM_024756.1	NM_024756.1		79812	13376090	NM_024756.1	MMRN2	NP_079032.1	ILMN_1715788	0007050291	S	3576	CCCACATCAAGGGAGAGATCAGGTGGAGGTAATTGGATCTTGGGGGCGGT	10	-	88685778-88685827	10q23.2a	Homo sapiens multimerin 2 (MMRN2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]			EndoGlyx-1; FLJ13465; EMILIN3; ENDOGLYX1	EndoGlyx-1; ENDOGLYX1; FLJ13465; EMILIN3
Homo sapiens	RefSeq	XM_928428.1	ILMN_41203	LOC653618	XM_928428.1	XM_928428.1		653618	89027744	XM_928428.1	LOC653618	XP_933521.1	ILMN_1794637	0002350356	S	2657	TGCCTCCTTTTTCAGCTCGTCTTGCGACTCCCGGACGCCTGTGAGGCTCT	8	-	7130565-7130614		PREDICTED: Homo sapiens similar to hypothetical protein LOC349196 (LOC653618), mRNA.					
Homo sapiens	RefSeq	NM_001083.3	ILMN_166201	LOC730456	XM_001125906.1	XM_001125906.1		730456	113416228	XM_001125906.1	LOC730456	XP_001125906.1	ILMN_1695288	0004610735	I	214	ACTGGAGCAGGACGAAGGGGGAGGGTCTCGAGGCCGAGTCCTGTTCTTCT				4q27a	PREDICTED: Homo sapiens hypothetical protein LOC730456 (LOC730456), mRNA.					CGB-PDE; PDE5; PDE5A1; CN5A
Homo sapiens	RefSeq	XM_942335.1	ILMN_38664	LOC652713	XM_942335.1	XM_942335.1		652713	89077118	XM_942335.1	LOC652713	XP_947428.1	ILMN_1713553	0005050762	S	268	TGGGGCATGTGGGCTCTGCACTACCTCCAGCTGACCATGGCATTCAGTTG					PREDICTED: Homo sapiens similar to zinc finger, DHHC domain containing 11 (LOC652713), mRNA.					
Homo sapiens	RefSeq	XM_001720643.1	ILMN_350953	LOC389765	XM_001720643.1	XM_001720643.1		389765	169178941	XM_001720643.1	LOC389765	XP_001720695.1	ILMN_3294134	0001190121	M	2379	CAGCACTTTGGGAGGCTGATGCAGGCGGATCACGAAGTCAGGAGATCGAG				9q21.33b	PREDICTED: Homo sapiens similar to KIF27C (LOC389765), mRNA.					
Homo sapiens	RefSeq	NR_002934.1	ILMN_33561	LOC619207	NR_002934.1	NR_002934.1		619207	89886432	NR_002934.1	LOC619207		ILMN_2214947	0001410754	S	4354	GAGGGAGGACACAGCAGACCTGTTTCTCAGGGATATGACGAGGCTGCGTT	10	+	135131393-135131442	10q26.3f	Homo sapiens scavenger receptor protein family member (LOC619207) on chromosome 10.					
Homo sapiens	RefSeq	NM_182679.1	ILMN_839	GPATCH4	NM_182679.1	NM_182679.1		54865	33356549	NM_182679.1	GPATCH4	NP_872620.1	ILMN_2383306	0004610136	A	1582	CAGAAAGGAAACTGATCTCTGGGACGTCAGCTGCTGAGAGGAGCAAGCGG	1	-	156564614-156564663	1q23.1a	Homo sapiens G patch domain containing 4 (GPATCH4), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	GPATC4	GPATC4
Homo sapiens	RefSeq	NM_182679.1	ILMN_839	GPATCH4	NM_182679.1	NM_182679.1		54865	33356549	NM_182679.1	GPATCH4	NP_872620.1	ILMN_2383305	0001820544	A	1647	GTTGAGGGAGTCAGCACAGTCCTTTCTGCAGCTTCTAACCCAGGACCATG	1	-	156564549-156564598	1q23.1a	Homo sapiens G patch domain containing 4 (GPATCH4), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	GPATC4	GPATC4
Homo sapiens	RefSeq	NM_182679.1	ILMN_839	GPATCH4	NM_182679.1	NM_182679.1		54865	33356549	NM_182679.1	GPATCH4	NP_872620.1	ILMN_2281069	0001580341	I	92	CTGGTGAGAGTCTGAGGATAGAGACTTTTTTCTCACCATGAATGTCACCC	1	-	156568825-156568838:156568839-156568874	1q23.1a	Homo sapiens G patch domain containing 4 (GPATCH4), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	GPATC4	GPATC4
Homo sapiens	RefSeq	NM_031500.1	ILMN_14537	PCDHA4	NM_018907.2	NM_018907.2		56144	14165411	NM_018907.2	PCDHA4	NP_061730.1	ILMN_1675822	0002630343	A	2319	GTGTGCTCCAGTGCGGTGGGGAGCTGGTCATACTCGCAGCAGAGGAGGCC	5	+	140169174-140169223	5q31.3b	Homo sapiens protocadherin alpha 4 (PCDHA4), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC138307; CNR1; CRNR1; CNRN1; MGC142169; PCDH-ALPHA4	MGC138307; CNR1; CRNR1; CNRN1; MGC142169; PCDH-ALPHA4
Homo sapiens	RefSeq	XR_019447.2	ILMN_182341	LOC645387	XR_019447.2	XR_019447.2		645387	169213075	XR_019447.2	LOC645387		ILMN_3295847	0000110736	M	330	CAAGAACGGCGGTACCCGGGTGGTTAAACTTCGCAAAATGCCTAGATAGT				18p11.31a	PREDICTED: Homo sapiens misc_RNA (LOC645387), miscRNA.					
Homo sapiens	RefSeq	Hs.334003	ILMN_180909	C12ORF71	NM_001080406.1	NM_001080406.1		728858	122937208	NM_001080406.1	C12orf71	NP_001073875.1	ILMN_1844083	0002070477	S	731	GGGATCACCCTGTGAATGCCACCAAAAGTCCCCATCGGTCAGCACCAACG	12	-	27234175-27234224	12p11.23a	Homo sapiens chromosome 12 open reading frame 71 (C12orf71), mRNA.					
Homo sapiens	RefSeq	XM_941238.1	ILMN_33551	LOC651952	XM_941238.1	XM_941238.1		651952	89067026	XM_941238.1	LOC651952	XP_946331.1	ILMN_1747054	0000510358	S	2	TGGGGAGGATTTGCACCTACAGACATCGAGGGCAGCGTGGCATGGAAAAA					PREDICTED: Homo sapiens hypothetical protein LOC651952 (LOC651952), mRNA.					
Homo sapiens	Unigene	Hs.333785	ILMN_86463	HS.333785	Hs.333785		Hs.333785		13718130	BG196443			ILMN_1850374	0000160497	S	285	GCTGTGGTGTGACGGGTGTGTATCTCTATCTCATACAATGGGCGCAGGTG	18	+	58532988-58533037		RST15665 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_199341.1	ILMN_5175	LOC374920	NM_199341.1	NM_199341.1		374920	40786409	NM_199341.1	LOC374920	NP_955373.1	ILMN_1748823	0000270091	S	1931	GCGAGAAAAAATGGAAAGGGGAGCCGGAAATGGAGGAGAGAGGACAAGCA	19	+	53392342-53392391	19q13.32c	Homo sapiens hypothetical protein LOC374920 (LOC374920), mRNA.				MGC50339	MGC50339
Homo sapiens	RefSeq	XM_001719661.1	ILMN_352143	LOC100133691	XM_001719661.1	XM_001719661.1		100133691	169217916	XM_001719661.1	LOC100133691	XP_001719713.1	ILMN_3248877	0005290280	S	171	TAAATGGACACACAATGGAGGGGAAATGTTTGTTGCCTTAAATCAAAAGG					PREDICTED: Homo sapiens similar to keratinocyte growth factor-like protein 1 (LOC100133691), mRNA.					
Homo sapiens	RefSeq	NM_001077686.1	ILMN_164245	AGAP8	NM_001077686.1	NM_001077686.1		728404	117956370	NM_001077686.1	AGAP8	NP_001071154.1	ILMN_3242883	0002140343	S	2066	AGGAGTGCATCAACGTGCTTCTGCAGTACGGCTGCCCCGACGAGTGTGTA	10	-	51224992-51225041	10q11.23a	Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH domain 8 (AGAP8), mRNA.					
Homo sapiens	RefSeq	NM_005076.2	ILMN_28505	CNTN2	NM_005076.2	NM_005076.2		6900	28373120	NM_005076.2	CNTN2	NP_005067.1	ILMN_1718896	0004260471	S	7400	GCCCCAAGACTCCTCCAACTTACCCGTCCCATCCAGGGCCTGCACAGCTT	1	+	203313524-203313573	1q32.1f	Homo sapiens contactin 2 (axonal) (CNTN2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8425542] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8425542] [evidence TAS]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8425542] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TAG-1; TAX; DKFZp781D102; TAX1; MGC157722; FLJ42746; AXT	TAG-1; TAX; DKFZp781D102; TAX1; MGC157722; FLJ42746; AXT
Homo sapiens	RefSeq	NM_022131.1	ILMN_5803	CLSTN2	NM_022131.1	NM_022131.1		64084	11545860	NM_022131.1	CLSTN2	NP_071414.1	ILMN_1731237	0004050288	S	4311	TCAATGTGTATGCTCTGTCCCCATCCTTCACTCCTCCTCAAGCTCACACC	3	+	141769218-141769267	3q23a-q23b	Homo sapiens calsyntenin 2 (CLSTN2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CSTN2; CS2; alcagamma; FLJ39113; FLJ39499; MGC119560	CSTN2; CS2; alcagamma; FLJ39113; FLJ39499; MGC119560
Homo sapiens	RefSeq	XM_939297.1	ILMN_8039	LRRC30	XM_292678.2	XM_292678.2		339291	37545084	XM_292678.2	LRRC30	XP_292678.2	ILMN_1664253	0001260561	A	639	CTTCATCGCAGAGGGCAACAACATCCACTCCTTCCCGAGGTCGCTTTGCC	18	+	7221775-7221824	18p11.23b	PREDICTED: Homo sapiens leucine rich repeat containing 30 (LRRC30), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	Unigene	Hs.572073	ILMN_124254	HS.572073	Hs.572073		Hs.572073		16199422	BI916193			ILMN_1829537	0005260220	S	417	GGACTTAATTCCACAGGAATAGTTGTCTGCTGAAGCGTGGCAGCAAGAGA	11	-	77049756-77049805		603178081F1 NIH_MGC_121 Homo sapiens cDNA clone IMAGE:5242268 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001007470.1	ILMN_26830	TRPM3	NM_206948.2	NM_206948.2		80036	55953094	NM_206948.2	TRPM3	NP_996831.1	ILMN_1815938	0006560372	A	766	CCACTTCATTCTGGCTGACAACGGGACCACTGGAAAATATGGAGCAGAGG	9	-	73442816-73442865	9q21.11c-q21.12a	Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 7, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [pmid 15824111] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MLSN2; LTRPC3; GON-2	MLSN2; LTRPC3; GON-2
Homo sapiens	RefSeq	NM_152570.1	ILMN_24238	LINGO2	NM_152570.1	NM_152570.1		158038	22749182	NM_152570.1	LINGO2	NP_689783.1	ILMN_1695978	0001110291	S	2645	GGCAGGCATGTGTCAGAGCCCTTCACACAGTGGGATACTAAGTGTTTGCG	9	-	27949240-27949289	9p21.2a-p21.1d	Homo sapiens leucine rich repeat and Ig domain containing 2 (LINGO2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LERN3; FLJ31810; LRRN6C	LERN3; FLJ31810; LRRN6C
Homo sapiens	RefSeq	XR_018047.2	ILMN_162897	LOC392635	XR_018047.2	XR_018047.2		392635	169170303	XR_018047.2	LOC392635		ILMN_3245390	0007000762	S	32	GGCTGCCCTGGAGGCCAAAATCTGTCATCAAAGTGAGTATTATCTTGGAG	7	+	12563974-12564023		PREDICTED: Homo sapiens misc_RNA (LOC392635), miscRNA.					
Homo sapiens	RefSeq	XM_930556.1	ILMN_31233	LOC653766	XM_930556.1	XM_930556.1		653766	89056943	XM_930556.1	LOC653766	XP_935649.1	ILMN_1653031	0004220047	S	111	CCACCGCGCGTTGCTTTCGACGCCGGAGTCCTTCGCATGCGCAGCCAGCG	19	+	60843426-60843475		PREDICTED: Homo sapiens similar to zinc finger protein 580 (LOC653766), mRNA.					
Homo sapiens	RefSeq	XM_928740.1	ILMN_32148	LOC221136	XM_928740.1	XM_928740.1		221136	89036637	XM_928740.1	LOC221136	XP_933833.1	ILMN_1809012	0003450358	A	843	CACCGCAACAAAGAACACTCCCTATACTGTACTCAACAATGGTTATGCAC	13	-	18608762-18608784:18609589-18609615		PREDICTED: Homo sapiens similar to CG4835-PA (LOC221136), mRNA.					
Homo sapiens	RefSeq	XM_926890.1	ILMN_34779	LOC653325	XM_926890.1	XM_926890.1		653325	89030134	XM_926890.1	LOC653325	XP_931983.1	ILMN_1781481	0004610730	S	2114	TCTGGATTTGAGCTGACCTGCGCTCCCTGGGGCCGAGACTGAGACTGTGA	9	+	139240815-139240864	9q34.3f	PREDICTED: Homo sapiens similar to Similar to RIKEN cDNA 2310002J15 gene (LOC653325), mRNA.					
Homo sapiens	Unigene	Hs.570581	ILMN_122762	HS.570581	Hs.570581		Hs.570581		76555267	DV080154			ILMN_1908085	0002690326	S	610	CCACAACGACTTACAGTGGCAGGGGATGCCTGGGATAGGTCCATTGTTTC	3	+	57389569-57389587:57390458-57390488		MGC9.7.1.1.1.A05.R.1 NIH_MGC_331 Homo sapiens cDNA clone MGC9.7.1.1.1.A05, mRNA sequence					
Homo sapiens	RefSeq	XM_001713703.1	ILMN_349877	LOC100132347	XM_001713703.1	XM_001713703.1		100132347	169216533	XM_001713703.1	LOC100132347	XP_001713755.1	ILMN_3247390	0004830768	S	90	GCGCGCTAGCCGCTGTCGGCCGCAGGAGCCCCGGGAATCTGGAGGGGCCG	X	+	14207-14256		PREDICTED: Homo sapiens hypothetical protein LOC100132347 (LOC100132347), mRNA.					
Homo sapiens	RefSeq	NM_007178.2	ILMN_13750	STRAP	NM_007178.3	NM_007178.3		11171	148727340	NM_007178.3	STRAP	NP_009109.3	ILMN_1731194	0004200672	S	1587	CAAGTGTCAGATGAAGGGAGGTGGAGTTATCCTCTTATAGTACAGTGGCC	12	+	15947359-15947408	12p12.3d	Homo sapiens serine/threonine kinase receptor associated protein (STRAP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MAWD; PT-WD; UNRIP	PT-WD; MAWD; UNRIP
Homo sapiens	RefSeq	XM_931604.1	ILMN_308061	FAM22A	NM_001099338.1	NM_001099338.1		728118	150170709	NM_001099338.1	FAM22A	NP_001092808.1	ILMN_1707694	0004730500	A	2834	GGCCAAGAAGCGACCTCTCTTTGGAAGCCTGTCCCCTGCTGAAAAGACAC	10	+	88984259-88984308	10q23.2b	Homo sapiens family with sequence similarity 22, member A (FAM22A), mRNA.					
Homo sapiens	RefSeq	NM_032846.2	ILMN_20609	RAB2B	NM_032846.2	NM_032846.2		84932	21361883	NM_032846.2	RAB2B	NP_116235.2	ILMN_1753002	0000670609	S	2137	GCCAAACTTGCCTTTGCTTCACTCATCATGCAGCCTTCTGGGTTGGTTGC	14	-	20997144-20997193	14q11.2c	Homo sapiens RAB2B, member RAS oncogene family (RAB2B), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ14824	FLJ14824
Homo sapiens	RefSeq	XM_926215.1	ILMN_45223	LOC642808	XM_926215.1	XM_926215.1		642808	89041526	XM_926215.1	LOC642808	XP_931308.1	ILMN_1662271	0005550504	S	1	ATGGAGACATCAGCCAGACAACGTTACACCATCCAGGCCTGCGGATCCAC	17	+	34451497-34451532:34455865-34455878		PREDICTED: Homo sapiens similar to RAD52 motif 1 isoform 1 (LOC642808), mRNA.					
Homo sapiens	RefSeq	XR_016047.1	ILMN_167745	LOC729255	XR_016047.1	XR_016047.1		729255	113412077	XR_016047.1	LOC729255		ILMN_3227563	0006060438	A	61	CGAAGGTGGCAAGAAGCCACTGAAACAGCCCAAGAATGCAGGCCAAGGAG				1p32.3d	PREDICTED: Homo sapiens misc_RNA (LOC729255), miscRNA.					
Homo sapiens	RefSeq	NR_002762.1	ILMN_9749	PRO0611	NR_002762.1	NR_002762.1		28997	84872045	NR_002762.1	PRO0611		ILMN_2230374	0001240754	S	508	GAGCAGAATGTGCAGAAAAATATGTGCTGCACTAGACCTCTGGTCCAACC	1	+	31234006-31234055	1p35.2a	Homo sapiens PRO0611 protein (PRO0611), non-coding RNA.					
Homo sapiens	RefSeq	NM_015328.1	ILMN_9551	AHCYL2	NM_015328.1	NM_015328.1		23382	24308042	NM_015328.1	AHCYL2	NP_056143.1	ILMN_1712786	0000870039	S	4614	CACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTTCGC	7	+	128856846-128856895	7q32.1a	Homo sapiens S-adenosylhomocysteine hydrolase-like 2 (AHCYL2), mRNA.		The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine [goid 4013] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0828; FLJ21719	KIAA0828; FLJ21719
Homo sapiens	RefSeq	XM_001717656.1	ILMN_350547	LOC730235	XM_001717656.1	XM_001717656.1		730235	169172241	XM_001717656.1	LOC730235	XP_001717708.1	ILMN_3305597	0003450279	M	810	TTCTGAATCCAGGAAGAGAGACTGACTGGGCAACATGTTATTCAGGTAGG				7p13b	PREDICTED: Homo sapiens hypothetical LOC730235 (LOC730235), mRNA.					
Homo sapiens	RefSeq	NM_000862.1	ILMN_24332	HSD3B1	NM_000862.2	NM_000862.2		3283	115345345	NM_000862.2	HSD3B1	NP_000853.1	ILMN_1780693	0003390433	S	1406	GTATTCCTCATGTCATCAAAACCTGCGCAGTCATTGGCCCAACAAGAAGG	1	+	119858930-119858979	1p12a	Homo sapiens hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 (HSD3B1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 8274411] [evidence IDA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 8274411] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 8274411] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the smooth endoplasmic reticulum [goid 30868] [evidence ISS]	The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones [goid 6700] [evidence IEA]; The chemical reactions and pathways resulting in the formation of androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 6702] [pmid 1944309] [evidence TAS]; The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6703] [pmid 1944309] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3-beta-hydroxy-delta(5)-steroid + NAD+ = 3-oxo-delta(5)-steroid + NADH + H+ [goid 3854] [pmid 1944309] [evidence ISS]; Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid [goid 4769] [pmid 1944309] [evidence ISS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	HSD3B; HSDB3	HSD3B; HSDB3
Homo sapiens	RefSeq	NM_024557.2	ILMN_7228	RIC3	NM_024557.2	NM_024557.2		79608	21362039	NM_024557.2	RIC3	NP_078833.2	ILMN_1749077	0001580114	S	2484	AGACCTGAGAGTTCGAAGAGGGCACATTCCCAAAGACATTCCCAGTCATG	11	-	8087430-8087479	11p15.4b	Homo sapiens resistance to inhibitors of cholinesterase 3 homolog (C. elegans) (RIC3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			PRO1385; FLJ11608; AYST720	PRO1385; FLJ11608; AYST720
Homo sapiens	RefSeq	NM_178354.1	ILMN_164593	LCE1F	NM_178354.1	NM_178354.1		353137	30387645	NM_178354.1	LCE1F	NP_848131.1	ILMN_1716471	0006380626	S	296	CCTCAGCGGGCTCCAGCTGCTGCGGAGGGGGCAGTGGCCAGCACTCTGGA	1	+	151015767-151015816	1q21.3b	Homo sapiens late cornified envelope 1F (LCE1F), mRNA.		The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		LEP6	LEP6
Homo sapiens	RefSeq	XM_941476.1	ILMN_42982	LOC652139	XM_941476.1	XM_941476.1		652139	89062419	XM_941476.1	LOC652139	XP_946569.1	ILMN_1700729	0003120010	S	46	GCCAAGGCAGATAAACATACGGCCAATAAGCACATAAAACGATGCTCAGC					PREDICTED: Homo sapiens hypothetical protein LOC652139 (LOC652139), mRNA.					
Homo sapiens	RefSeq	NM_025149.3	ILMN_164438	FLJ20920	NM_025149.3	NM_025149.3		80221	52851452	NM_025149.3	FLJ20920	NP_079425.2	ILMN_1711928	0001850164	S	1913	CTCCTGTCAGAATCCAACCTGGCTTTATGCACCTAGATGTCCCCAGCACC	17	+	45906953-45907002	17q21.33b	Homo sapiens hypothetical protein FLJ20920 (FLJ20920), mRNA.					
Homo sapiens	RefSeq	XM_927881.1	ILMN_40679	LOC644785	XM_927881.1	XM_927881.1		644785	88978362	XM_927881.1	LOC644785	XP_932974.1	ILMN_1776975	0005700608	S	142	TTACTCTCTGGGGCCAGCGGTGCTGGCCAGTCGCTCCGAGTGCGGGAGTG	4	+	190823140-190823189		PREDICTED: Homo sapiens similar to T-box 1 isoform C (LOC644785), mRNA.					
Homo sapiens	RefSeq	NM_017798.2	ILMN_15249	YTHDF1	NM_017798.2	NM_017798.2		54915	31377749	NM_017798.2	YTHDF1	NP_060268.2	ILMN_1753885	0002850441	S	2969	GGAGTTTGAGTTGAAGCATGAAAATGGTGCCCATGCCTGACGCTCCAGCG	20	-	61297460-61297509	20q13.33d	Homo sapiens YTH domain family, member 1 (YTHDF1), mRNA.				C20orf21; FLJ20391	C20orf21; FLJ20391
Homo sapiens	RefSeq	NM_005316.2	ILMN_28516	GTF2H1	NM_005316.2	NM_005316.2		2965	19923304	NM_005316.2	GTF2H1	NP_005307.1	ILMN_1726693	0007570343	S	2388	GGAGACTGTTGCTCAACCATCAGGAAACAGTTGTCAGAAGACATCATTGG	11	+	18344573-18344622	11p15.1c	Homo sapiens general transcription factor IIH, polypeptide 1, 62kDa (GTF2H1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2449431] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 8946909] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 1939271] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; A complex that contains kinase activity directed towards the C-terminal Domain (CTD) of the largest subunit of RNA polymerase II and is essential for initiation at RNA polymerase II promoters in vitro. In S. cerevisiae, it is composed of the 5-subunit core (Rad3p, Tfb1p, Tfb2p, Ssl1p and Tfb4p), Ssl2p, and TFIIK (Kin28p, Ccl1p, and Tfb3p). All of the subunits have equivalents in humans: the 5 subunit core is composed of XPD, p62, p55, p44, p34; the equivalent of the TFIIK subcomplex is composed of MO15, Mat1, and a cyclin; the human equivalent of Ssl2p is XPB [goid 5675] [pmid 9118947] [evidence TAS]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 7533895] [evidence TAS]; The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 9118947] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 8946909] [evidence EXP]; The extension of an RNA molecule after transcription initiation at an RNA polymerase II-specific promoter by the addition of ribonucleotides catalyzed by RNA polymerase II [goid 6368] [pmid 9405375] [evidence EXP]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 8692841] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8652557] [evidence IPI]; Catalysis of the reaction: ATP + (DNA-directed RNA polymerase) = ADP + phospho-(DNA-directed RNA polymerase) [goid 8353] [pmid 7533895] [evidence TAS]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 9118947] [evidence TAS]	BTF2; TFIIH	BTF2; TFIIH
Homo sapiens	RefSeq	NM_003225.2	ILMN_18189	TFF1	NM_003225.2	NM_003225.2		7031	48928023	NM_003225.2	TFF1	NP_003216.1	ILMN_1722489	0001230672	S	169	TCCTGGTGTCACGCCCTCCCAGTGTGCAAATAAGGGCTGCTGTTTCGACG	21	-	43783423-43783472	21q22.3b	Homo sapiens trefoil factor 1 (TFF1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 2303034] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 9043862] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [pmid 15831516] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	D21S21; BCEI; pNR-2; pS2; HP1.A; HPS2	D21S21; BCEI; pNR-2; pS2; HP1.A; HPS2
Homo sapiens	RefSeq	NM_001313.3	ILMN_7661	CRMP1	NM_001313.3	NM_001313.3		1400	62422567	NM_001313.3	CRMP1	NP_001304.1	ILMN_1811405	0001410739	I	310	GCCAGAGGGGGCCATGTCGTACCAGGGCAAGAAGAGCATCCCGCACATCA	4	-	5940857-5940894:5940895-5940906	4p16.1g	Homo sapiens collapsin response mediator protein 1 (CRMP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 8973361] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8973361] [evidence TAS]	Catalysis of the reaction: 5,6-dihydrouracil + H2O = 3-ureidopropionate [goid 4157] [pmid 8973361] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds [goid 16810] [evidence IEA]	DRP-1; DPYSL1; DRP1	DRP-1; DPYSL1; DRP1
Homo sapiens	RefSeq	XM_930263.1	ILMN_35159	LOC645304	XM_930263.1	XM_930263.1		645304	89033844	XM_930263.1	LOC645304	XP_935356.1	ILMN_1656208	0005490564	A	1755	GTTTCTCTCAAGGACTACTGCACCAGAATGAAGGAAAAACAGAAACATAT	11	-	27867687-27867736		PREDICTED: Homo sapiens similar to Heat shock protein HSP 90-alpha (HSP 86), transcript variant 1 (LOC645304), mRNA.					
Homo sapiens	RefSeq	NM_031844.2	ILMN_3074	HNRNPU	NM_031844.2	NM_031844.2		3192	74136882	NM_031844.2	HNRNPU	NP_114032.2	ILMN_1743677	0004250112	A	6756	GGCTGCTCTTGAATCGTCCTGTTTTCTTTGCCTAGTATTAGCACCACAGG	1	-	245013642-245013691	1q44b	Homo sapiens heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) (HNRNPU), transcript variant 1, mRNA.	A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Particulate complex of heterogeneous nuclear RNA (hnRNA; a heterogeneous mixture of RNA molecules of high Mr with a rapid turnover rate that occurs in cell nuclei during protein synthesis; it is the form of RNA synthesized in eukaryotes by RNA polymerase II, that which is translated into protein) with protein, which is cell-specific and heterogeneous. The protein component may play a role in the processing of the hnRNA to mRNA [goid 30530] [pmid 7509195] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1628625] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1628625] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SAF-A; U21.1; HNRPU; HNRNPU	SAF-A; HNRPU; U21.1; HNRNPU
Homo sapiens	RefSeq	NM_015414.2	ILMN_139372	RPL36	NM_015414.2	NM_015414.2		25873	16117793	NM_015414.2	RPL36	NP_056229.2	ILMN_1771462	0003290446	I	67	TGAAGGAGCCGGGACGCGGGGCTCTGGGCCTCGGGAACTGAGCCGGTACT	19	+	5641433-5641482	19p13.3b	Homo sapiens ribosomal protein L36 (RPL36), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11256614] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [evidence NAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DKFZP566B023	DKFZP566B023
Homo sapiens	RefSeq	NM_002061.2	ILMN_165648	GCLM	NM_002061.2	NM_002061.2		2730	53759142	NM_002061.2	GCLM	NP_002052.1	ILMN_1788547	0001990577	S	989	AAGCATTCCTGACATTCAAGCGCACGAGTGGGTGCCGCTGTGGCTACTGC	1	-	94354625-94354674	1p22.1a	Homo sapiens glutamate-cysteine ligase, modifier subunit (GCLM), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9675072] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9895302] [evidence NAS]; An enzyme complex that catalyzes the ligation of glutamate to cysteine, forming glutamylcysteine [goid 17109] [evidence IEA]	The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid [goid 6534] [evidence IEA]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [pmid 9841880] [evidence IDA]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [pmid 9895302] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [pmid 12081989] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [pmid 10395918] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 10395918] [evidence IDA]; Any process that activates or increases the activity of glutamate-cysteine ligase, typically by lowering its sensitivity to inhibition by glutathione and by increasing its affinity for glutamate [goid 35229] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 9895302] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [pmid 12975258] [evidence IMP]; Any process that modulates the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51900] [evidence IEA]	Catalysis of the reaction: ATP + L-glutamate + L-cysteine = ADP + phosphate + gamma-L-glutamyl-L-cysteine [goid 4357] [pmid 16183645] [evidence IMP]; Catalysis of the reaction: ATP + L-glutamate + L-cysteine = ADP + phosphate + gamma-L-glutamyl-L-cysteine [goid 4357] [pmid 9841880] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with the catalytic subunit of glutamate-cysteine ligase [goid 35226] [pmid 9675072] [evidence IPI]; Interacting selectively with the catalytic subunit of glutamate-cysteine ligase [goid 35226] [pmid 9841880] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	GLCLR	GLCLR
Homo sapiens	RefSeq	NM_002061.2	ILMN_165648	GCLM	NM_002061.2	NM_002061.2		2730	53759142	NM_002061.2	GCLM	NP_002052.1	ILMN_2225974	0004480053	S	2807	ATGTGAAATCTGCCCGGGCACACCTCATGCCTGTAATCCCAGCACTCTGG	1	-	94352807-94352856	1p22.1a	Homo sapiens glutamate-cysteine ligase, modifier subunit (GCLM), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9675072] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9895302] [evidence NAS]; An enzyme complex that catalyzes the ligation of glutamate to cysteine, forming glutamylcysteine [goid 17109] [evidence IEA]	The chemical reactions and pathways involving cysteine, 2-amino-3-mercaptopropanoic acid [goid 6534] [evidence IEA]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [pmid 9841880] [evidence IDA]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [pmid 9895302] [evidence IDA]; The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [pmid 12081989] [evidence IMP]; The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [pmid 10395918] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 10395918] [evidence IDA]; Any process that activates or increases the activity of glutamate-cysteine ligase, typically by lowering its sensitivity to inhibition by glutathione and by increasing its affinity for glutamate [goid 35229] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 9895302] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that modulates the size of blood vessels [goid 50880] [pmid 12975258] [evidence IMP]; Any process that modulates the frequency, rate or extent of the change in the membrane potential of the mitochondria from negative to positive [goid 51900] [evidence IEA]	Catalysis of the reaction: ATP + L-glutamate + L-cysteine = ADP + phosphate + gamma-L-glutamyl-L-cysteine [goid 4357] [pmid 16183645] [evidence IMP]; Catalysis of the reaction: ATP + L-glutamate + L-cysteine = ADP + phosphate + gamma-L-glutamyl-L-cysteine [goid 4357] [pmid 9841880] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with the catalytic subunit of glutamate-cysteine ligase [goid 35226] [pmid 9675072] [evidence IPI]; Interacting selectively with the catalytic subunit of glutamate-cysteine ligase [goid 35226] [pmid 9841880] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	GLCLR	GLCLR
Homo sapiens	RefSeq	NM_152599.2	ILMN_18512	MFSD6L	NM_152599.2	NM_152599.2		162387	46048468	NM_152599.2	MFSD6L	NP_689812.2	ILMN_3241005	0005050273	S	2009	AGCCGGGGAAGAGAGGATGGGTCTGTGCTGAAGGCCCAACAGGATCATCT	17	-	8700528-8700577	17p13.1c	Homo sapiens major facilitator superfamily domain containing 6-like (MFSD6L), mRNA.					
Homo sapiens	RefSeq	NM_152599.2	ILMN_18512	MFSD6L	NM_152599.2	NM_152599.2		162387	46048468	NM_152599.2	MFSD6L	NP_689812.2	ILMN_1670611	0003870347	S	1835	GACACCAGTGACTCTGAGCAGGGGACAGAACAGGACTGGCTTGTGAAGGC	17	-	8700702-8700751	17p13.1c	Homo sapiens major facilitator superfamily domain containing 6-like (MFSD6L), mRNA.					
Homo sapiens	RefSeq	NM_017836.3	ILMN_29618	SLC41A3	NM_017836.3	NM_017836.3		54946	56549670	NM_017836.3	SLC41A3	NP_060306.3	ILMN_2356111	0003890681	A	2202	GGGGCCTCATACAACCCTTCATCTGCACTCAACATTTAATCGTGTCCTTG	3	-	127207987-127208036	3q21.2c	Homo sapiens solute carrier family 41, member 3 (SLC41A3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	FLJ20473; SLC41A1-L2	FLJ20473; SLC41A1-L2
Homo sapiens	RefSeq	NM_003907.1	ILMN_15752	EIF2B5	NM_003907.2	NM_003907.2		8893	83267878	NM_003907.2	EIF2B5	NP_003898.2	ILMN_1688534	0001090576	S	2760	GAGGAGCTAAGCAGGCCCGGCAGTTGGAGGAAGGCCAGAGGAACAGCTTT	3	+	183862961-183863010	3q27.1b	Homo sapiens eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa (EIF2B5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 15060152] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 11323413] [evidence IDA]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [pmid 15507143] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 15723074] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 12499492] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence ISS]; The process aimed at the progression of an astrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function [goid 14002] [pmid 15723074] [evidence IMP]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [pmid 15217090] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 14566705] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 15723074] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of translational initiation [goid 45948] [evidence ISS]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 51716] [pmid 8626696] [evidence IDA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 8688466] [evidence NAS]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 16289705] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 15054402] [evidence IMP]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 11323413] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15060152] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15060152] [evidence IPI]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	EIF-2B; EIF2Bepsilon; CACH; LVWM; CLE	EIF-2B; EIF2Bepsilon; CACH; LVWM; CLE
Homo sapiens	RefSeq	NM_001031729.1	ILMN_19308	FRMD5	NM_032892.3	NM_032892.3		84978	94721307	NM_032892.3	FRMD5	NP_116281.2	ILMN_1794885	0000610348	A	1891	GAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGC	15	-	44166032-44166081	15q15.3b-q15.3c	Homo sapiens FERM domain containing 5 (FRMD5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region [goid 19898] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	FLJ41022; MGC14161	MGC14161
Homo sapiens	RefSeq	XM_936223.1	ILMN_36739	LOC653878	XM_936223.1	XM_936223.1		653878	89037681	XM_936223.1	LOC653878	XP_941316.1	ILMN_1674014	0004590609	S	42	TGGAAAGAGAGGAAAGGGCACAGGGGTCTGTGGGACGTTGATGGTTTGCG					PREDICTED: Homo sapiens similar to Cytosolic acyl coenzyme A thioester hydrolase, inducible (Long chain acyl-CoA thioester hydrolase) (Long chain acyl-CoA hydrolase) (CTE-I) (CTE-Ib) (LOC653878), mRNA.					
Homo sapiens	RefSeq	XM_001713766.1	ILMN_346447	LOC100130224	XM_001713766.1	XM_001713766.1		100130224	169216136	XM_001713766.1	LOC100130224	XP_001713818.1	ILMN_3233132	0000010445	I	4112	ATTTTTGTATTTTTGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTTGT					PREDICTED: Homo sapiens hypothetical protein LOC100130224, transcript variant 3 (LOC100130224), mRNA.					
Homo sapiens	Unigene	Hs.566333	ILMN_118674	HS.566333	Hs.566333		Hs.566333		23299849	BU632594			ILMN_1890907	0001500424	S	27	ACAAATATAATTATCTGATCTTTGACAAAGGATCAAAGGCAATTCAATGA					UI-H-FE1-bdw-f-17-0-UI.s1 NCI_CGAP_FE1 Homo sapiens cDNA clone UI-H-FE1-bdw-f-17-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001721738.1	ILMN_335195	LOC729438	XM_001721738.1	XM_001721738.1		729438	169171647	XM_001721738.1	LOC729438	XP_001721790.1	ILMN_3297675	0000380059	M	283	CCAAGATCGCCAAGTCAGTCATCGCCCCACTGGCTGACCAGAACATATCC				7q11.23d	PREDICTED: Homo sapiens similar to opposite strand transcription unit to Stag3 (LOC729438), mRNA.					
Homo sapiens	RefSeq	XR_015401.1	ILMN_183931	LOC728291	XR_015401.1	XR_015401.1		728291	113422592	XR_015401.1	LOC728291		ILMN_3299878	0001850682	M	1607	GGGAAACTAGATATTGCTGCTTTTTGAACGGGGTAGGAGGGTTTACCTAG	11	+	111559344-111559393	11q23.1c	PREDICTED: Homo sapiens misc_RNA (LOC728291), miscRNA.					
Homo sapiens	RefSeq	XM_936030.1	ILMN_36060	LOC653853	XM_936030.1	XM_936030.1		653853	89027592	XM_936030.1	LOC653853	XP_941123.1	ILMN_1675748	0002470440	I	75	CATTGTACTTATTTTAAAGAGTTATTTTAGTAGAAAAGGTGTAGGGAGTG					PREDICTED: Homo sapiens similar to hypothetical protein FLJ40722, transcript variant 3 (LOC653853), mRNA.					
Homo sapiens	RefSeq	XM_001726055.1	ILMN_343000	LOC100129083	XM_001726055.1	XM_001726055.1		100129083	169214008	XM_001726055.1	LOC100129083	XP_001726107.1	ILMN_3262263	0006290274	M	413	TTCTGGAGAAGTCCACATGGCAGCTTCCTCTCTCCACCCGAAAGAAGTAC				19q13.33d	PREDICTED: Homo sapiens hypothetical LOC100129083 (LOC100129083), mRNA.					
Homo sapiens	RefSeq	XR_000521.1	ILMN_5521	MBL1P1	NR_002724.1	NR_002724.1		8512	84872009	NR_002724.1	MBL1P1		ILMN_1745141	0000630468	A	1294	CTCCTGCACCTCCTCCTTCATTGCCATCTGTGAGTTTCCTGCCTGAAGAG	10	+	81672725-81672774	10q22.3f	Homo sapiens mannose-binding lectin (protein A) 1, pseudogene 1 (MBL1P1) on chromosome 10.				COLEC3P	
Homo sapiens	RefSeq	NM_001006637.1	ILMN_10097	RAB37	NM_001006637.1	NM_001006637.1		326624	54859667	NM_001006637.1	RAB37	NP_001006638.1	ILMN_1793269	0005720544	I	1076	TAAGCAAACCTCCCCTGACATGTATCCCTTTGACCCCAAGCTCTGCCTCC	17	+	70254442-70254491	17q25.1b	Homo sapiens RAB37, member RAS oncogene family (RAB37), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ32507; FLJ30284	FLJ32507; FLJ30284
Homo sapiens	RefSeq	XR_038896.1	ILMN_336712	LOC100129966	XR_038896.1	XR_038896.1		100129966	169202513	XR_038896.1	LOC100129966		ILMN_3255035	0005890438	M	1223	GGAAAGCCTAATCAGGTCAGATCCCACCCCTGTCCAAGCCCCCAGTTGGT	11	-	18573364-18573413	11p15.1c	PREDICTED: Homo sapiens misc_RNA (LOC100129966), miscRNA.					
Homo sapiens	RefSeq	NM_207409.1	ILMN_15159	C6ORF126	NM_207409.1	NM_207409.1		389383	46409449	NM_207409.1	C6orf126	NP_997292.1	ILMN_2054121	0006840370	S	365	CCGCCGGTGCCATATGATTTAGAGGAAGATGCAGGCTGGTCACTGCTCCC	6	+	35855184-35855233	6p21.31b	Homo sapiens chromosome 6 open reading frame 126 (C6orf126), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Increases the activity of an enzyme [goid 8047] [evidence IEA]	dJ510O8.5; UNQ3045	dJ510O8.5; UNQ3045
Homo sapiens	RefSeq	NM_032855.2	ILMN_19272	HSH2D	NM_032855.2	NM_032855.2		84941	40254993	NM_032855.2	HSH2D	NP_116244.1	ILMN_1788017	0006040647	S	1938	TGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGG	19	+	16129952-16130001	19p13.11f	Homo sapiens hematopoietic SH2 domain containing (HSH2D), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HSH2; ALX; FLJ14886	HSH2; ALX; FLJ14886
Homo sapiens	RefSeq	XM_001716068.1	ILMN_350906	LOC100131266	XM_001716068.1	XM_001716068.1		100131266	169216216	XM_001716068.1	LOC100131266	XP_001716120.1	ILMN_3248076	0004490672	S	365	CGCAGGAGAAAAGGGAGCACGCCCAGGAGCTGATGAGCCTGCAGAACCTG					PREDICTED: Homo sapiens similar to hCG1816984 (LOC100131266), mRNA.					
Homo sapiens	RefSeq	NM_198484.2	ILMN_308708	ZNF621	NM_001098414.1	NM_001098414.1		285268	148529015	NM_001098414.1	ZNF621	NP_001091884.1	ILMN_1785926	0002630360	S	7765	GCAACCACCACACCGATCATTCAGCAGCCATCAACAGTGAGGCAAGACTG	3	+	40555814-40555863	3p22.1c	Homo sapiens zinc finger protein 621 (ZNF621), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ45246; MGC126668; FLJ23786; DKFZp686B11107	FLJ45246; MGC126668; FLJ23786; DKFZp686B11107
Homo sapiens	RefSeq	Hs.568398	ILMN_168636	LOC729967	XM_001131915.1	XM_001131915.1		729967	113412955	XM_001131915.1	LOC729967	XP_001131915.1	ILMN_1868265	0002350326	S	1699	CAGGAGCACCCTGACTATTATCTACTACTGGTGTGTGTCCAGCGCCTCCG	2	+	39037565-39037614	2p22.1c	PREDICTED: Homo sapiens hypothetical protein LOC729967 (LOC729967), mRNA.					
Homo sapiens	RefSeq	NR_006882.1	ILMN_338196	SNORD3D	NR_006882.1	NR_006882.1		780854	166706865	NR_006882.1	SNORD3D		ILMN_3242315	0000380685	S	61	GTAGAGCACCGAAAACCCCGAGGAAGAGAGGTAGCGTTTTCTCCTGAGCG	17	-	19015839-19015888		Homo sapiens small nucleolar RNA, C/D box 3D (SNORD3D), small nucleolar RNA.				U3-4	U3-4
Homo sapiens	Unigene	Hs.564504	ILMN_117157	HS.564504	Hs.564504		Hs.564504		27842881	BX096603			ILMN_1821352	0006660112	S	456	ATGTAGATGGGGAGTGACCACCGCCAACAGAAGTGTGGCCATCTTGCCCG	12	+	3889544-3889593		BX096603 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998H151782, mRNA sequence					
Homo sapiens	RefSeq	NM_017542.3	ILMN_23795	POGK	NM_017542.3	NM_017542.3		57645	22027479	NM_017542.3	POGK	NP_060012.3	ILMN_1756669	0006220368	S	3651	GAGTAACGGCTCTGCTGCCAGGGTTTCTCTGGGCTCATTCTTCCACTGAC	1	+	165090132-165090181	1q24.1c	Homo sapiens pogo transposable element with KRAB domain (POGK), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	LST003; KIAA15131; KIAA1513; BASS2	LST003; KIAA15131; KIAA1513; BASS2
Homo sapiens	RefSeq	NM_001024688.1	ILMN_1630	NBN	NM_001024688.1	NM_001024688.1		4683	67189944	NM_001024688.1	NBN	NP_001019859.1	ILMN_2358041	0006110753	A	4593	ACCATACTGCCTTGAATTACTGTAGCTGCATAGATGCTCCTTAAGTTGGG	8	-	91014768-91014817	8q21.3d	Homo sapiens nibrin (NBN), transcript variant 2, mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12419185] [evidence EXP]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Trimeric protein complex that possesses endonuclease activity; involved in DNA repair and checkpoint signaling. In Saccharomyces the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins related to the Saccharomyces proteins [goid 30870] [pmid 9590181] [evidence IDA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [pmid 12447371] [evidence IDA]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [pmid 12529385] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [pmid 11448772] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation [goid 1832] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [pmid 9590181] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9590181] [evidence TAS]; A signal transduction-based surveillance mechanism that acts during a mitotic cell cycle to ensure accurate chromosome segregation by preventing entry into mitosis in the presence of damaged DNA [goid 7095] [pmid 11438675] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that modulates the frequency, rate or extent of initiation of DNA replication; the process by which DNA becomes competent to replicate. In eukaryotes, replication competence is established in early G1 and lost during the ensuing S phase [goid 30174] [pmid 9590181] [evidence TAS]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [pmid 9590181] [evidence TAS]; Any cell cycle checkpoint that blocks entry into S phase [goid 31575] [pmid 10766245] [evidence IDA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [pmid 9590180] [evidence IC ]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 11486038] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 9590181] [evidence IPI]	MGC87362; FLJ10155; ATV; NBS; AT-V1; AT-V2; NBS1	MGC87362; FLJ10155; ATV; NBS; AT-V1; AT-V2; NBS1
Homo sapiens	RefSeq	NM_001024688.1	ILMN_1630	NBN	NM_001024688.1	NM_001024688.1		4683	67189944	NM_001024688.1	NBN	NP_001019859.1	ILMN_1717016	0006480706	I	282	GTATAGAAAAACATTTTGGAAATTTCTACAGAAAAAGTAAAATTGTTACT	8	-	91062927-91062927:91063357-91063405	8q21.3d	Homo sapiens nibrin (NBN), transcript variant 2, mRNA.	The terminal region of a linear chromosome that includes the telomeric DNA repeats and associated proteins [goid 781] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12419185] [evidence EXP]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Trimeric protein complex that possesses endonuclease activity; involved in DNA repair and checkpoint signaling. In Saccharomyces the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins related to the Saccharomyces proteins [goid 30870] [pmid 9590181] [evidence IDA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [pmid 12447371] [evidence IDA]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [pmid 12529385] [evidence IDA]; Any process that contributes to the maintenance of proper telomeric length and structure by affecting and monitoring the activity of telomeric proteins and the length of telomeric DNA. These processes includes those that shorten and lengthen the telomeric DNA sequences [goid 723] [pmid 11448772] [evidence IMP]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation [goid 1832] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [pmid 9590181] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 9590181] [evidence TAS]; A signal transduction-based surveillance mechanism that acts during a mitotic cell cycle to ensure accurate chromosome segregation by preventing entry into mitosis in the presence of damaged DNA [goid 7095] [pmid 11438675] [evidence IDA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that modulates the frequency, rate or extent of initiation of DNA replication; the process by which DNA becomes competent to replicate. In eukaryotes, replication competence is established in early G1 and lost during the ensuing S phase [goid 30174] [pmid 9590181] [evidence TAS]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage [goid 30330] [pmid 9590181] [evidence TAS]; Any cell cycle checkpoint that blocks entry into S phase [goid 31575] [pmid 10766245] [evidence IDA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of other isotypes of immunoglobulin, accomplished through a recombination process involving an intrachromosomal deletion involving switch regions that reside 5' of each constant region gene segment in the immunoglobulin heavy chain locus [goid 45190] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [pmid 9590180] [evidence IC ]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 11486038] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 9590181] [evidence IPI]	MGC87362; FLJ10155; ATV; NBS; AT-V1; AT-V2; NBS1	MGC87362; FLJ10155; ATV; NBS; AT-V1; AT-V2; NBS1
Homo sapiens	RefSeq	XM_930237.1	ILMN_34913	LOC645268	XM_930237.1	XM_930237.1		645268	89033836	XM_930237.1	LOC645268	XP_935330.1	ILMN_1735701	0007330475	S	298	CTTTTTCATAAAGTAGAAACCCAAATCTAAACCCAACAAAATGCCTGGTA	11	-	27075618-27075652:27075653-27075667		PREDICTED: Homo sapiens hypothetical protein LOC645268 (LOC645268), mRNA.					
Homo sapiens	Unigene	Hs.566820	ILMN_119069	HS.566820	Hs.566820		Hs.566820		6704479	AW297854			ILMN_1878795	0005670056	S	332	CAGAAGTTGCTCCAGATAGAAAAACAGGGTCCCAGGGGAGGGCAAACACC	8	+	125924753-125924802		UI-H-BW0-aju-c-03-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2732932 3, mRNA sequence					
Homo sapiens	RefSeq	NR_000029.1	ILMN_3185	RPL23AP7	NR_000029.1	NR_000029.1		118433	25141250	NR_000029.1	RPL23AP7		ILMN_2222750	0003130682	S	168	TAGGAGATGGCACCGAAAGCGAAGGAAGCTCCTGCTCCTCCTAAAGCCGA	2	-	114086249-114086294:114099656-114099659	2q14.1a	Homo sapiens ribosomal protein L23a pseudogene 7 (RPL23AP7) on chromosome 2.				RPL23AL1; bA395L14.9	bA395L14.9; RPL23AL1
Homo sapiens	RefSeq	XR_038064.1	ILMN_344440	LOC100127975	XR_038064.1	XR_038064.1		100127975	169214040	XR_038064.1	LOC100127975		ILMN_3187425	0003310349	A	1100	TATCTCAGCACTTTGGGAGGCTGAAGCAGGCAGATCACTTGAGGTTGGGA				19q13.33e	PREDICTED: Homo sapiens misc_RNA (LOC100127975), partial miscRNA.					
Homo sapiens	Unigene	Hs.564154	ILMN_116867	HS.564154	Hs.564154		Hs.564154		1505788	AA033979			ILMN_1903877	0001710563	S	93	TGTGCAACTAAAGGAAAGCCAAGAAGCAGGGTGGGGGCAGGAGATGGAGG	10	-	5295456-5295505		zi05d09.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:429905 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001717672.1	ILMN_353109	LOC100130457	XM_001717672.1	XM_001717672.1		100130457	169203398	XM_001717672.1	LOC100130457	XP_001717724.1	ILMN_3273898	0007510730	M	937	CAGCTCCGCGCTCTGTCAGATGCAGTGGACAGCGCCGGGGTGAAAGTAAG					PREDICTED: Homo sapiens hypothetical protein LOC100130457 (LOC100130457), mRNA.					
Homo sapiens	RefSeq	NM_014400.1	ILMN_23267	LYPD3	NM_014400.2	NM_014400.2		27076	93004087	NM_014400.2	LYPD3	NP_055215.2	ILMN_1739605	0002470524	S	1538	TCCCCACTCTAAGCACTGCCTCCCCTACTCCCCGCATCTTTGGGGAATCG	19	-	48656904-48656953	19q13.31a	Homo sapiens LY6/PLAUR domain containing 3 (LYPD3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to the plasma membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that the peptide sequence does not span the membrane [goid 46658] [pmid 15012588] [evidence TAS]			C4.4A	C4.4A
Homo sapiens	RefSeq	NM_016612.1	ILMN_5060	SLC25A37	NM_016612.2	NM_016612.2		51312	82775372	NM_016612.2	SLC25A37	NP_057696.2	ILMN_1715969	0000620682	S	1256	TTTTTGCAGGGTGCTGCCTATGGGCCCTCTGCTCCCCAATGCCTTAGAGA	8	+	23429454-23429503	8p21.2d	Homo sapiens solute carrier family 25, member 37 (SLC25A37), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron ions into, out of or within a mitochondrion [goid 48250] [evidence IEA]	Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]	PRO2217; PRO1278; MFRN; PRO1584; HT015; MSCP; MSC	HT015; PRO2217; PRO1278; PRO1584; MSCP; MSC
Homo sapiens	RefSeq	NM_006565.2	ILMN_22198	CTCF	NM_006565.2	NM_006565.2		10664	62952500	NM_006565.2	CTCF	NP_006556.1	ILMN_1786015	0005220196	S	3179	ATGTAGCAGAATGGCACCCAGACCACTGCCCACCAGTGACGGACATGCAC	16	+	66229981-66230030	16q22.1b	Homo sapiens CCCTC-binding factor (zinc finger protein) (CTCF), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9407128] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8649389] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 9407128] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8649389] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9591631] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 8649389] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8649389] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10734189] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16949368] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8649389] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_929071.1	ILMN_41389	LOC646110	XM_929071.1	XM_929071.1		646110	89037380	XM_929071.1	LOC646110	XP_934164.1	ILMN_1672624	0000770243	S	162	CCTGATATTACCTGAGGACAGAACTTGCATTCTCAAACTTTCTCTGGAGA	14	+	61664496-61664545		PREDICTED: Homo sapiens similar to SERTA domain containing 4 (LOC646110), mRNA.					
Homo sapiens	RefSeq	NM_175748.1	ILMN_307543	UBR7	NM_001100417.1	NM_001100417.1		55148	154426263	NM_001100417.1	UBR7	NP_001093887.1	ILMN_1726594	0006400215	I	35	GAAATCAGCCCGCGTCCGGCGCAGGCGGGAGAAGGGAGAGGAGTGACATC	14	+	92743188-92743237	14q32.12b	Homo sapiens ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ10483; MGC9518	FLJ10483; MGC9518
Homo sapiens	RefSeq	NM_175748.1	ILMN_307543	UBR7	NM_001100417.1	NM_001100417.1		55148	154426263	NM_001100417.1	UBR7	NP_001093887.1	ILMN_1758293	0003290209	A	1134	AGGGAAGATTGCCCAGGCCACTGACAGGAGCGATCCCCTAATGGATACCC	14	+	92756419-92756468	14q32.12b	Homo sapiens ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ10483; MGC9518	FLJ10483; MGC9518
Homo sapiens	RefSeq	NM_018108.2	ILMN_307543	UBR7	NM_001100417.1	NM_001100417.1		55148	154426263	NM_001100417.1	UBR7	NP_001093887.1	ILMN_1667839	0006100576	I	3222	CGTGCAGCACAATAGTACCGATCAGTTAACTCAGCGCTGAAGGGCTTGTT	14	+	92764976-92765025	14q32.12b	Homo sapiens ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ10483; MGC9518	FLJ10483; MGC9518
Homo sapiens	RefSeq	XM_001717947.1	ILMN_352269	LOC100132657	XM_001717947.1	XM_001717947.1		100132657	169188826	XM_001717947.1	LOC100132657	XP_001717999.1	ILMN_3295735	0001410040	M	9	ACAATCCACGCTTCTCCGGATCGCGAGTGGTGGGGGAAGGCTGTACGACA	10	+	99070384-99070408:99070662-99070686	10q24.1b	PREDICTED: Homo sapiens hypothetical protein LOC100132657 (LOC100132657), mRNA.					
Homo sapiens	RefSeq	NM_001007228.1	ILMN_15666	SPOP	NM_001007226.1	NM_001007226.1		8405	56117835	NM_001007226.1	SPOP	NP_001007227.1	ILMN_1795404	0006380390	A	2918	CTGATGAGGGATCAGGCCCCTACCTCTGCCAAGGCAAGTAATGGTAGTGG	17	-	47676368-47676417	17q21.33a	Homo sapiens speckle-type POZ protein (SPOP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9414087] [evidence TAS]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 9414087] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TEF2	TEF2
Homo sapiens	RefSeq	NM_002156.4	ILMN_178202	HSPD1	NM_002156.4	NM_002156.4		3329	41399283	NM_002156.4	HSPD1	NP_002147.2	ILMN_1784367	0004250577	I	35	GAGGGGACACGGGCTCATTGCGGTGTGCGCCCTGCACTCTGTCCCTCACT	2	-	198364556-198364605	2q33.1b	Homo sapiens heat shock 60kDa protein 1 (chaperonin) (HSPD1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 18229457] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18086682] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11807771] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 18086682] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [pmid 11807771] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 9243807] [evidence IDA]; A protein complex that phosphorylates cyclin-dependent kinases such as Cdc2 on Thr161 (or an equivalent residue); contains a catalytic subunit and a regulatory subunit, and some examples also include an assembly factor [goid 19907] [pmid 11445587] [evidence IDA]; Small membrane-bounded organelle formed by pinching off of a coated region of membrane. Some coats are made of clathrin, whereas others are made from other proteins [goid 30135] [pmid 11807771] [evidence IDA]; A multiprotein complex that consists of at least three proteins, CD14, TLR4, and MD-2, each of which is glycosylated [goid 46696] [pmid 17164250] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that contributes to cytokine production by a B cell [goid 2368] [pmid 16148103] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of a T cell mediated immune response to tumor cell [goid 2842] [pmid 10663613] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 17823127] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 11050098] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-alpha production [goid 32727] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-10 production [goid 32733] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [pmid 16148103] [evidence IDA]; The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones [goid 42026] [pmid 11050098] [evidence IDA]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 16148103] [evidence IDA]; Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 17823127] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 18086682] [evidence IMP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgG isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgG constant region gene segments in the immunoglobulin heavy chain locus [goid 48291] [pmid 16148103] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 18086682] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 17164250] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with lipopolysaccharide [goid 1530] [pmid 17164250] [evidence IDA]; Interacting selectively with one of the p53 family of proteins [goid 2039] [pmid 18086682] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 11807771] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 11050098] [evidence IC ]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 10205158] [evidence IPI]	HuCHA60; GROEL; HSP60; SPG13; CPN60; HSP65	HuCHA60; GROEL; HSP60; SPG13; CPN60; HSP65
Homo sapiens	RefSeq	NM_002156.4	ILMN_178202	HSPD1	NM_002156.4	NM_002156.4		3329	41399283	NM_002156.4	HSPD1	NP_002147.2	ILMN_2381397	0000070605	A	2184	TCAGGATTTTAGTGCTTGCCACCACCAGATGAGAAGTTAAGCAGCCTTTC	2	-	198351395-198351444	2q33.1b	Homo sapiens heat shock 60kDa protein 1 (chaperonin) (HSPD1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 18229457] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18086682] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11807771] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 18086682] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [pmid 11807771] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 9243807] [evidence IDA]; A protein complex that phosphorylates cyclin-dependent kinases such as Cdc2 on Thr161 (or an equivalent residue); contains a catalytic subunit and a regulatory subunit, and some examples also include an assembly factor [goid 19907] [pmid 11445587] [evidence IDA]; Small membrane-bounded organelle formed by pinching off of a coated region of membrane. Some coats are made of clathrin, whereas others are made from other proteins [goid 30135] [pmid 11807771] [evidence IDA]; A multiprotein complex that consists of at least three proteins, CD14, TLR4, and MD-2, each of which is glycosylated [goid 46696] [pmid 17164250] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that contributes to cytokine production by a B cell [goid 2368] [pmid 16148103] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of a T cell mediated immune response to tumor cell [goid 2842] [pmid 10663613] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 17823127] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 11050098] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-alpha production [goid 32727] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-10 production [goid 32733] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [pmid 16148103] [evidence IDA]; The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones [goid 42026] [pmid 11050098] [evidence IDA]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 16148103] [evidence IDA]; Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 17823127] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 18086682] [evidence IMP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgG isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgG constant region gene segments in the immunoglobulin heavy chain locus [goid 48291] [pmid 16148103] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 18086682] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 17164250] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with lipopolysaccharide [goid 1530] [pmid 17164250] [evidence IDA]; Interacting selectively with one of the p53 family of proteins [goid 2039] [pmid 18086682] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 11807771] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 11050098] [evidence IC ]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 10205158] [evidence IPI]	HuCHA60; GROEL; HSP60; SPG13; CPN60; HSP65	HuCHA60; GROEL; HSP60; SPG13; CPN60; HSP65
Homo sapiens	RefSeq	NM_002156.4	ILMN_178202	HSPD1	NM_002156.4	NM_002156.4		3329	41399283	NM_002156.4	HSPD1	NP_002147.2	ILMN_1766713	0006960072	A	1314	CGGCTTGCAAAACTTTCAGATGGAGTGGCTGTGCTGAAGGTTGGTGGGAC	2	-	198353204-198353215:198353726-198353763	2q33.1b	Homo sapiens heat shock 60kDa protein 1 (chaperonin) (HSPD1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 18229457] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18086682] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 11807771] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 18086682] [evidence IDA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [pmid 11807771] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 9243807] [evidence IDA]; A protein complex that phosphorylates cyclin-dependent kinases such as Cdc2 on Thr161 (or an equivalent residue); contains a catalytic subunit and a regulatory subunit, and some examples also include an assembly factor [goid 19907] [pmid 11445587] [evidence IDA]; Small membrane-bounded organelle formed by pinching off of a coated region of membrane. Some coats are made of clathrin, whereas others are made from other proteins [goid 30135] [pmid 11807771] [evidence IDA]; A multiprotein complex that consists of at least three proteins, CD14, TLR4, and MD-2, each of which is glycosylated [goid 46696] [pmid 17164250] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; Any process that contributes to cytokine production by a B cell [goid 2368] [pmid 16148103] [evidence IDA]; Any series of molecular signals generated as a consequence of binding to a toll-like receptor and relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response [goid 2755] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of a T cell mediated immune response to tumor cell [goid 2842] [pmid 10663613] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 17823127] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 11050098] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-alpha production [goid 32727] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32729] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-10 production [goid 32733] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-12 production [goid 32735] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-6 production [goid 32755] [pmid 16148103] [evidence IDA]; The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones [goid 42026] [pmid 11050098] [evidence IDA]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 16148103] [evidence IDA]; Any process that stimulates, induces or increases the rate of macrophage activation [goid 43032] [pmid 17164250] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 17823127] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 18086682] [evidence IMP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgG isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgG constant region gene segments in the immunoglobulin heavy chain locus [goid 48291] [pmid 16148103] [evidence IDA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 18086682] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 16148103] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 17164250] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with lipopolysaccharide [goid 1530] [pmid 17164250] [evidence IDA]; Interacting selectively with one of the p53 family of proteins [goid 2039] [pmid 18086682] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 11807771] [evidence IDA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 11050098] [evidence IC ]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 10205158] [evidence IPI]	HuCHA60; GROEL; HSP60; SPG13; CPN60; HSP65	HuCHA60; GROEL; HSP60; SPG13; CPN60; HSP65
Homo sapiens	RefSeq	NM_172240.1	ILMN_3256	WDR51B	NM_172240.1	NM_172240.1		282809	26665868	NM_172240.1	WDR51B	NP_758440.1	ILMN_1667201	0007160609	S	2624	GGAGGAGGTGTCCACATTTATGGTGTGTATAGGTAACATGGGGAAAATGC	12	-	89813798-89813847	12q21.33a-q21.33b	Homo sapiens WD repeat domain 51B (WDR51B), mRNA.				FLJ14923; TUWD12; FLJ41111	FLJ14923; TUWD12; FLJ41111
Homo sapiens	Unigene	Hs.253196	ILMN_83455	HS.253196	Hs.253196		Hs.253196		6474925	AW195733			ILMN_1856983	0006760128	S	207	CTGAGAGGGCAGGTTCCAATAGGCTGACACCTTCAACACGGACTGGTGCC	4	-	4900000-4900049		xn85c12.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2701270 3, mRNA sequence					
Homo sapiens	Unigene	Hs.579243	ILMN_131424	HS.579243	Hs.579243		Hs.579243		83131461	DB160069			ILMN_1889669	0001090553	S	284	ACCGAAGATGCAGGGGATGCTGCCTGCCCCGAAGCCCACCCTGGGGCTGG	17	+	4744118-4744167		DB160069 THYMU3 Homo sapiens cDNA clone THYMU3040068 5, mRNA sequence					
Homo sapiens	RefSeq	NM_021009.3	ILMN_8850	UBC	NM_021009.3	NM_021009.3		7316	67191207	NM_021009.3	UBC	NP_066289.2	ILMN_2331501	0003060300	A	2222	GCAGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGT	12	-	123962277-123962326	12q24.31f	Homo sapiens ubiquitin C (UBC), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HMG20	HMG20
Homo sapiens	RefSeq	NM_021009.3	ILMN_8850	UBC	NM_021009.3	NM_021009.3		7316	67191207	NM_021009.3	UBC	NP_066289.2	ILMN_2252160	0006020195	I	95	TCCAGAGAGCGGAACAGGCGAGGAAAAGTAGTCCCTTCTCGGCGATTCTG	12	-	123965216-123965265	12q24.31f	Homo sapiens ubiquitin C (UBC), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	HMG20	HMG20
Homo sapiens	RefSeq	XR_015609.2	ILMN_181630	LOC730102	XR_015609.2	XR_015609.2		730102	169161949	XR_015609.2	LOC730102		ILMN_3306801	0001580189	M	729	GCCTTCCTTCATGTGATACAGGGGAAATCCGTGGGCAAGGTGCTTCTCGC				1q25.2b	PREDICTED: Homo sapiens misc_RNA (LOC730102), miscRNA.					
Homo sapiens	Unigene	Hs.44690	ILMN_72704	HS.44690	Hs.44690		Hs.44690		3387940	AF070571			ILMN_1868805	0006860129	S	1971	GTGCTGCATTGGAGAGAAGCCAAGGGCTGAGAGTACAGTGCCAACCACGT	8	-	118878391-118878440		Homo sapiens clone 24739 mRNA sequence					
Homo sapiens	RefSeq	NM_002421.2	ILMN_26214	MMP1	NM_002421.2	NM_002421.2		4312	13027798	NM_002421.2	MMP1	NP_002412.1	ILMN_1726448	0003360224	S	1810	CAAGACAGAAAGAGACAGGAGACATGAGTCTTTGCCGGAGGAAAAGCAGC	11	-	102165974-102166023	11q22.2b	Homo sapiens matrix metallopeptidase 1 (interstitial collagenase) (MMP1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 2167156] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 3027129] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 2167156] [evidence TAS]	CLG; CLGN	CLG; CLGN
Homo sapiens	RefSeq	XM_931895.1	ILMN_34293	DDX12	XM_931895.1	XM_931895.1		440081	89035330	XM_931895.1	DDX12	XP_936988.1	ILMN_1784420	0003780170	I	2613	CAGACTTCTCGCTTCCTTTCTGCTGGGCCTCTGAGGGGTCATGGGGCCAT	12	-	9465776-9465792:9465793-9465825	12p13.31a	PREDICTED: Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae), transcript variant 17 (DDX12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]		
Homo sapiens	RefSeq	XM_373266.2	ILMN_14736	LOC392275	XM_373266.2	XM_373266.2		392275	51466770	XM_373266.2	LOC392275	XP_373266.2	ILMN_1668069	0007380475	S	1190	CTAAGCCCTGGAGAGGTCGGCGCCTGGACTACATCACGTACCGCGGAGTT	8	+	145177896-145177945	8q24.3g	PREDICTED: Homo sapiens similar to Sphingomyelin phosphodiesterase 3 (Neutral sphingomyelinase 2) (Neutral sphingomyelinase II) (nSMase2) (nSMase-2) (LOC392275), mRNA.					
Homo sapiens	RefSeq	NM_005725.3	ILMN_180747	TSPAN2	NM_005725.3	NM_005725.3		10100	58331193	NM_005725.3	TSPAN2	NP_005716.2	ILMN_2186319	0005390450	S	3093	TTTGAGATTAGACCCAAACATGCTTTTAAATGTCTCATGCCAAGGCACTG	1	-	115392219-115392268	1p13.2a	Homo sapiens tetraspanin 2 (TSPAN2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9714763] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TSN2; FLJ12082; RP4-666F24.2; TSPAN-2; 6330415F13Rik	TSN2; FLJ12082; RP4-666F24.2; TSPAN-2; 6330415F13Rik
Homo sapiens	RefSeq	NM_005725.3	ILMN_180747	TSPAN2	NM_005725.3	NM_005725.3		10100	58331193	NM_005725.3	TSPAN2	NP_005716.2	ILMN_1810093	0002320575	S	2550	CTCTCTGCCTGAAGACAGGAAACAGGCCCAAGTGCATACTCGGGTTCTTT	1	-	115392762-115392811	1p13.2a	Homo sapiens tetraspanin 2 (TSPAN2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9714763] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TSN2; FLJ12082; RP4-666F24.2; TSPAN-2; 6330415F13Rik	TSN2; FLJ12082; RP4-666F24.2; TSPAN-2; 6330415F13Rik
Homo sapiens	RefSeq	NM_006280.1	ILMN_3302	SSR4	NM_006280.1	NM_006280.1		6748	5454089	NM_006280.1	SSR4	NP_006271.1	ILMN_1680403	0007570243	S	425	TCCATCATCCCGCCTCTGTTTACAGTCAGCGTGGACCATCGGGGCACTTG	X	+	152716744-152716785:152716978-152716985	Xq28f	Homo sapiens signal sequence receptor, delta (translocon-associated protein delta) (SSR4), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A translocation complex that constitutes the specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. Composed of a heterotetramer of alpha, beta, gamma and delta subunits (translocon-associated proteins or TRAPs). In yeast it is a heterotrimeric complex consisting of Sec61p, Sbh1p, and Sss1p. The Sec61 complex functions in cotranslational and posttranslational translocation events [goid 5784] [pmid 9286695] [evidence NAS]; A translocation complex that constitutes the specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. Composed of a heterotetramer of alpha, beta, gamma and delta subunits (translocon-associated proteins or TRAPs). In yeast it is a heterotrimeric complex consisting of Sec61p, Sbh1p, and Sss1p. The Sec61 complex functions in cotranslational and posttranslational translocation events [goid 5784] [pmid 7492314] [evidence NAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TRAPD	TRAPD
Homo sapiens	RefSeq	NM_003396.1	ILMN_22095	WNT9B	NM_003396.1	NM_003396.1		7484	17017975	NM_003396.1	WNT9B	NP_003387.1	ILMN_1703459	0005290411	S	1335	CCCAACCTTGTTGAGGACTTGGAGAGGAGGGCAGAGTGAGAAAGACATGG	17	+	42309307-42309356	17q21.32a	Homo sapiens wingless-type MMTV integration site family, member 9B (WNT9B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9441749] [evidence NAS]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9441749] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9441749] [evidence NAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	WNT15; WNT14B	WNT15; WNT14B
Homo sapiens	RefSeq	XR_037698.1	ILMN_350976	LOC728627	XR_037698.1	XR_037698.1		728627	169211836	XR_037698.1	LOC728627		ILMN_3305788	0004010482	M	1086	CTGGAGGCCTTCCTGGGCCACCTTTATCTCCCCAAGCCATAGGGACAACT				17q21.31b	PREDICTED: Homo sapiens misc_RNA (LOC728627), miscRNA.					
Homo sapiens	RefSeq	NM_000091.2	ILMN_38928	COL4A3	NM_031365.2	NM_031365.2		1285	89142734	NM_031365.2	COL4A3	NP_112733.2	ILMN_1662731	0006380066	A	7024	CCACTGGCCTCCACTCAGGCCTCCATCTTCTCATGCCCTCTTACCAGTAT	2	+	227887145-227887194	2q36.3b-q36.3c	Homo sapiens collagen, type IV, alpha 3 (Goodpasture antigen) (COL4A3), transcript variant 5, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form nets within basement membranes [goid 5587] [pmid 10766752] [evidence IDA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10766752] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 10766752] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10766752] [evidence NAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 7987396] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 10766752] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10837460] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 12682293] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 10766752] [evidence IDA]	Interacting selectively with an integrin [goid 5178] [pmid 12682293] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [pmid 10766752] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12682293] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10212244] [evidence IPI]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [pmid 10766752] [evidence NAS]		
Homo sapiens	RefSeq	NM_016152.2	ILMN_20217	RARB	NM_016152.2	NM_016152.2		5915	14916495	NM_016152.2	RARB	NP_057236.1	ILMN_2390526	0006270487	A	2032	GTTAGTATGGAAGCTTGTCTTTGCTCTTTCTGATGCTCTCAAACTGCATC	3	+	25613684-25613733	3p24.2a	Homo sapiens retinoic acid receptor, beta (RARB), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2177841] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 2177841] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2833708] [evidence TAS]	Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [pmid 2177841] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [pmid 2833708] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RRB2; NR1B2; HAP	RRB2; NR1B2; HAP
Homo sapiens	RefSeq	NM_138693.1	ILMN_1816	KLF14	NM_138693.1	NM_138693.1		136259	20162553	NM_138693.1	KLF14	NP_619638.1	ILMN_1681168	0006520167	S	1195	GTTGCCTCAAGACAGCCCCCAGGAACTGATAAGAAGGGATGAACTCCCGT	7	-	130417616-130417665	7q32.2b	Homo sapiens Kruppel-like factor 14 (KLF14), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BTEB5	BTEB5
Homo sapiens	RefSeq	NM_203308.1	ILMN_29156	MGC34774	NM_203308.1	NM_203308.1		399670	42558265	NM_203308.1	MGC34774	NP_976053.1	ILMN_1749234	0000730452	S	1689	GAAGCTTAGACTAGGAAGATGTGTGACCAAGAGGTGGCAGGGGTCGCCCT	7	+	77826605-77826654	7q21.11a	Homo sapiens ribosomal protein L13A-like (MGC34774), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]				
Homo sapiens	RefSeq	NM_139276.2	ILMN_170837	STAT3	NM_139276.2	NM_139276.2		6774	47080104	NM_139276.2	STAT3	NP_644805.1	ILMN_2410986	0002100484	A	4225	GCCTCTCCTGTGCGTATGGGAACACCTAGCACGTGCTGGATGGGCTGCCT	17	-	40466041-40466090	17q21.2b	Homo sapiens signal transducer and activator of transcription 3 (acute-phase response factor) (STAT3), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12444102] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7512451] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 8675499] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9670957] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10205054] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7512451] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 15664994] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10205054] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 15664994] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7512451] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8675499] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA];  [goid 5062] [pmid 7512451] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15664994] [evidence IPI]	APRF; FLJ20882; MGC16063	APRF; FLJ20882; MGC16063
Homo sapiens	RefSeq	XM_941597.1	ILMN_34504	LOC652216	XM_941597.1	XM_941597.1		652216	88955102	XM_941597.1	LOC652216	XP_946690.1	ILMN_1788072	0006370259	S	247	GCACAGAAGTTAGCAGTAGACTGCCATCTCCCTGGTGGATTCCAGGGCCC					PREDICTED: Homo sapiens similar to T-box 1 isoform C (LOC652216), mRNA.					
Homo sapiens	RefSeq	NM_001032220.1	ILMN_21861	SLC11A1	NM_000578.3	NM_000578.3		6556	109255240	NM_000578.3	SLC11A1	NP_000569.3	ILMN_1741165	0000780465	A	2121	GGGACCTGCTGTTTCCTAGCGCAGCCATGTGATTACCCTCTGGGTCTCAG	2	+	218968130-218968179	2q35e	Homo sapiens solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 (SLC11A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8537108] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8537108] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10967134] [evidence NAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium [goid 9617] [pmid 7717395] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8537108] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]	NRAMP1; NRAMP; LSH	NRAMP1; NRAMP; LSH
Homo sapiens	RefSeq	NM_003589.2	ILMN_28629	CUL4A	NM_003589.2	NM_003589.2		8451	57165422	NM_003589.2	CUL4A	NP_003580.1	ILMN_1695792	0002640487	A	2869	GTCCGCCCTGCTGCGTCTGTTCGTCAGCTGAGTTCCTTGTGAATCTCTGT	13	+	112966537-112966586	13q34d	Homo sapiens cullin 4A (CUL4A), transcript variant 2, mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 8681378] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8681378] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8681378] [evidence TAS]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [pmid 8681378] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12504025] [evidence IPI]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]		
Homo sapiens	RefSeq	NM_003589.2	ILMN_28629	CUL4A	NM_003589.2	NM_003589.2		8451	57165422	NM_003589.2	CUL4A	NP_003580.1	ILMN_2331163	0007200021	A	3445	GTCTCTTTTTGAAACATGCGGGTTTGAAATATGACACCTTGTGGGTTTCC	13	+	112967113-112967162	13q34d	Homo sapiens cullin 4A (CUL4A), transcript variant 2, mRNA.	Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 8681378] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8681378] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8681378] [evidence TAS]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [pmid 8681378] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12504025] [evidence IPI]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]		
Homo sapiens	RefSeq	NM_000213.3	ILMN_26306	ITGB4	NM_000213.3	NM_000213.3		3691	54607034	NM_000213.3	ITGB4	NP_000204.3	ILMN_1653965	0006550379	I	4307	AAGTTCGAGCCCCTGCTGGGGGAGGAGCTGGACCTGCGGCGCGTCACGTG	17	+	71261452-71261501	17q25.1c-q25.1d	Homo sapiens integrin, beta 4 (ITGB4), transcript variant 1, mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 7545057] [evidence TAS]; The region of the plasma membrane located at the basal end of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 9925] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2311577] [evidence NAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11375975] [evidence IPI]	CD104	CD104
Homo sapiens	RefSeq	XM_938198.1	ILMN_23282	NSF	NM_006178.1	NM_006178.1		4905	11079227	NM_006178.1	NSF	NP_006169.1	ILMN_1680687	0001410484	A	2042	TCAGCACCACCATCCACGTGCCCAACATTGCCACAGGAGAGCAGCTGTTG	17	+	42125484-42125533	17q21.32a	Homo sapiens N-ethylmaleimide-sensitive factor (NSF), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	SKD2	
Homo sapiens	RefSeq	NM_006178.1	ILMN_23282	NSF	NM_006178.1	NM_006178.1		4905	11079227	NM_006178.1	NSF	NP_006169.1	ILMN_2330845	0004040279	A	3337	CCTCCACACACTTCTTCCAAAAGGAAGCACCCGTTGAGTCCTTTTGAGGG	17	+	42188393-42188442	17q21.32a	Homo sapiens N-ethylmaleimide-sensitive factor (NSF), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	SKD2	SKD2
Homo sapiens	RefSeq	NM_006178.1	ILMN_23282	NSF	NM_006178.1	NM_006178.1		4905	11079227	NM_006178.1	NSF	NP_006169.1	ILMN_2251784	0003420398	I	765	TGCCTTCCGAGTATTTCCTCCAGAGATTGTGGAGCAGATGGGTTGTATAC	17	+	41858444-41858484:41889388-41889396	17q21.32a	Homo sapiens N-ethylmaleimide-sensitive factor (NSF), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	SKD2	SKD2
Homo sapiens	RefSeq	NM_006178.1	ILMN_23282	NSF	NM_006178.1	NM_006178.1		4905	11079227	NM_006178.1	NSF	NP_006169.1	ILMN_1680353	0005260138	I	3737	CCTGTGATTCCTGGTGGCCAGTATCCTGGATTCCTCTAAGATCTTGCCTC	17	+	42188793-42188842	17q21.32a	Homo sapiens N-ethylmaleimide-sensitive factor (NSF), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	SKD2	SKD2
Homo sapiens	RefSeq	NM_003199.1	ILMN_12126	TCF4	NM_003199.2	NM_003199.2		6925	145386535	NM_003199.2	TCF4	NP_003190.1	ILMN_1814194	0002510672	S	2565	CGGCCCACACCCTGGAATGGGAGACGCATCGAATCACATGGGACAGATGT	18	-	52895457-52895506	18q21.2d	Homo sapiens transcription factor 4 (TCF4), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1681116] [evidence TAS]	Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 2105528] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2105528] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9824680] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16630820] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10903890] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11955446] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 2105528] [evidence NAS]	SEF2; ITF2; MGC149723; SEF2-1A; MGC149724; SEF2-1B; PTHS; SEF2-1; E2-2	SEF2; ITF2; MGC149723; SEF2-1A; MGC149724; SEF2-1B; SEF2-1; E2-2
Homo sapiens	RefSeq	XM_001725161.1	ILMN_348087	LOC100134672	XM_001725161.1	XM_001725161.1		100134672	169170728	XM_001725161.1	LOC100134672	XP_001725213.1	ILMN_3246087	0004120196	S	117	TGTTGCCCACGTTCTGGACTGCCTGGAGGTTTAACTGACGCTGCTGCACC	7	+	101494696-101494723:101494948-101494957:101494958-101494969		PREDICTED: Homo sapiens hypothetical protein LOC100134672 (LOC100134672), mRNA.					
Homo sapiens	RefSeq	NM_016377.2	ILMN_22152	AKAP7	NM_004842.2	NM_004842.2		9465	20336197	NM_004842.2	AKAP7	NP_004833.1	ILMN_1733690	0005340504	A	1951	AAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCACTGC	6	+	131604367-131604416	6q23.2a	Homo sapiens A kinase (PRKA) anchor protein 7 (AKAP7), transcript variant alpha, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10613906] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 10613906] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 10613906] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10613906] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 9545239] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10613906] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 9545239] [evidence IC ]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10613906] [evidence TAS]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 9545239] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10613906] [evidence IDA]	AKAP18	AKAP18
Homo sapiens	RefSeq	NM_004842.2	ILMN_22152	AKAP7	NM_004842.2	NM_004842.2		9465	20336197	NM_004842.2	AKAP7	NP_004833.1	ILMN_2410406	0006380689	A	799	GCTTAGCAGGGCATTTGACTACTTTATCTGAGGCCAGAACTCTCACACAC	6	+	131603215-131603264	6q23.2a	Homo sapiens A kinase (PRKA) anchor protein 7 (AKAP7), transcript variant alpha, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10613906] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 10613906] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 10613906] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10613906] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 9545239] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10613906] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 9545239] [evidence IC ]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10613906] [evidence TAS]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 9545239] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10613906] [evidence IDA]	AKAP18	AKAP18
Homo sapiens	RefSeq	NM_006997.2	ILMN_16130	TACC2	NM_006997.2	NM_006997.2		10579	45827751	NM_006997.2	TACC2	NP_008928.1	ILMN_2315780	0003140743	A	3462	CGTCGGCACACTGCTGTTCCTCCAGTTCCATGGACAGGTTCTGTTTTCAC	10	+	123970718-123970767	10q26.13a-q26.13b	Homo sapiens transforming, acidic coiled-coil containing protein 2 (TACC2), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15207008] [evidence IDA]; Interacting selectively with a nuclear hormone receptor, a ligand-dependent receptor found in the nucleus of the cell [goid 35257] [pmid 15207008] [evidence IDA]	AZU-1; ECTACC	AZU-1; ECTACC
Homo sapiens	RefSeq	XM_001724267.1	ILMN_347260	LOC100130964	XM_001724267.1	XM_001724267.1		100130964	169173252	XM_001724267.1	LOC100130964	XP_001724319.1	ILMN_3267142	0004780035	M	176	GACAGCAGTAGTAGCAGCAACAGTAACAGCAGTAGTGACAGCAACCAGTC				8p11.22b	PREDICTED: Homo sapiens similar to hCG2045185 (LOC100130964), mRNA.					
Homo sapiens	RefSeq	XM_936712.1	ILMN_42531	LOC647656	XM_936712.1	XM_936712.1		647656	88987504	XM_936712.1	LOC647656	XP_941805.1	ILMN_1655140	0006370047	S	189	TGATTGGCCATCAGAAGTTGACAATGACCAATTGAGAGCAATCACTGAAA					PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC647656), mRNA.					
Homo sapiens	RefSeq	NM_018711.2	ILMN_29751	SVOP	NM_018711.2	NM_018711.2		55530	72534841	NM_018711.2	SVOP	NP_061181.1	ILMN_1764780	0004290176	S	3229	TCAAAGGAAGCAGTGGGAGGCCAGTTGGTTTTGAGTTGGTCTCCGCAGGC	12	-	107855211-107855242:107856732-107856749	12q24.11a	Homo sapiens SV2 related protein homolog (rat) (SVOP), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of an ion from one side of a membrane to the other [goid 15075] [evidence IEA]	DKFZp761H039	DKFZp761H039
Homo sapiens	RefSeq	XM_939770.1	ILMN_33866	LOC650683	XM_939770.2	XM_939770.2		650683	113424809	XM_939770.2	LOC650683	XP_944863.2	ILMN_1677363	0000940402	S	844	AGCTGCTTTCTCCCTTCCATCCATATCCTCTCTTCCTGTCACCTCCCCAT					PREDICTED: Homo sapiens hypothetical LOC650683 (LOC650683), mRNA.					
Homo sapiens	RefSeq	NM_030569.3	ILMN_8344	ITIH5	NM_030569.3	NM_030569.3		80760	49355768	NM_030569.3	ITIH5	NP_085046.3	ILMN_2335557	0002510711	A	1470	AGGAGGACGCAGGCTCGCAGCTCATCGGGTTCTACGATGAAATCAGGACC	10	-	7658959-7658981:7661724-7661750	10p14e	Homo sapiens inter-alpha (globulin) inhibitor H5 (ITIH5), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving hyaluronan, the naturally occurring anionic form of hyaluronic acid, any member of a group of glycosaminoglycans, the repeat units of which consist of beta-1,4 linked D-glucuronyl-beta-(1,3)-N-acetyl-D-glucosamine [goid 30212] [evidence IEA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]	DKFZp686F0145; pp14776; MGC10848	DKFZp686F0145; pp14776; MGC10848
Homo sapiens	RefSeq	NM_001003665.1	ILMN_25155	C1ORF95	NM_001003665.2	NM_001003665.2		375057	144922729	NM_001003665.2	C1orf95	NP_001003665.1	ILMN_1664592	0003890754	S	3716	AAGAGCAGCCTCACCCAGGCACAGTGCAGGGCATTTTAGCTCCTGGGAGG	1	+	224859549-224859598	1q42.12d	Homo sapiens chromosome 1 open reading frame 95 (C1orf95), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP11-9C4.1; DKFZp761P211	RP11-9C4.1; DKFZp761P211
Homo sapiens	RefSeq	XM_946011.1	ILMN_35229	LOC650546	XM_946011.1	XM_946011.1		650546	89042913	XM_946011.1	LOC650546	XP_951104.1	ILMN_1676057	0001820458	I	446	CAGGTAGAGGATTTGAATTGACATTTTCCCAAAGAAGATATACAAGTGGT					PREDICTED: Homo sapiens similar to ubiquitin specific protease 32, transcript variant 2 (LOC650546), mRNA.					
Homo sapiens	RefSeq	NM_152385.1	ILMN_17426	C2ORF63	NM_152385.1	NM_152385.1		130162	22748824	NM_152385.1	C2orf63	NP_689598.1	ILMN_1805148	0007610392	S	2115	TCTTAACCAGCTGAGGGAGCTTGTACAACACCTTATGTATGCTGGTTGGG	2	-	55256372-55256421	2p16.1d	Homo sapiens chromosome 2 open reading frame 63 (C2orf63), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ31438	FLJ31438
Homo sapiens	RefSeq	NM_001025930.1	ILMN_12436	TTLL3	NM_001025930.2	NM_001025930.2		26140	109134339	NM_001025930.2	TTLL3	NP_001021100.2	ILMN_1785535	0001260487	I	1785	GCCTCAATATGTGGGCATCCGGCTCCTGGTAGAGGGCTTCACCATCAAGA	3	+	9849802-9849851	3p25.3c	Homo sapiens tubulin tyrosine ligase-like family, member 3 (TTLL3), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	MGC120532; MGC120530; MGC120529; DKFZp686D076; FLJ13898; HOTTL; DKFZP434B103	MGC120532; MGC120529; FLJ13898; HOTTL; DKFZP434B103
Homo sapiens	RefSeq	NM_002887.3	ILMN_22623	RARS	NM_002887.3	NM_002887.3		5917	40068503	NM_002887.3	RARS	NP_002878.2	ILMN_1751378	0000060400	S	1936	TGTGGCGTATGCTGCTATGTGAAGCAGTAGCTGCTGTCATGGCCAAGGGG	5	+	167878685-167878734	5q35.1a	Homo sapiens arginyl-tRNA synthetase (RARS), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7590355] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7590355] [evidence TAS]	The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6420] [pmid 7590355] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg) [goid 4814] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	ArgRS; DALRD1; MGC8641	ArgRS; DALRD1; MGC8641
Homo sapiens	Unigene	Hs.545468	ILMN_108673	HS.545468	Hs.545468		Hs.545468		30980413	CD236948			ILMN_1826738	0006510209	S	12	GGAAGTGAAGGGTGGGAGGGCTGACTTCTCCCCAGATTCAAATGCAGATG	8	-	32349734-32349783		FNPAEG09 FNP Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XR_037839.1	ILMN_342001	LOC440061	XR_037839.1	XR_037839.1		440061	169203566	XR_037839.1	LOC440061		ILMN_3207615	0005720750	A	286	CGGAGACTAAGGAGCTCTTCTGTGAGGCTGACAAGAGATTGCTCTGTGGG				11q14.3b	PREDICTED: Homo sapiens misc_RNA (LOC440061), miscRNA.					
Homo sapiens	RefSeq	XR_037839.1	ILMN_342001	LOC440061	XR_037839.1	XR_037839.1		440061	169203566	XR_037839.1	LOC440061		ILMN_3284127	0000010128	M	980	GCTGTGTGGGGAGCACAAGCATTCACCTCTGGCAAGCATTACTGGGAGGT				11q14.3b	PREDICTED: Homo sapiens misc_RNA (LOC440061), miscRNA.					
Homo sapiens	Unigene	Hs.557040	ILMN_112701	HS.557040	Hs.557040		Hs.557040		80915137	DA411236			ILMN_1899400	0006590288	S	389	TTCTTGGGCAGCCTCAGGGGGAAGCCGGACCAGCCTTAAGTGAAAGTGGA	8	+	142139608-142139657		DA411236 BRTHA3 Homo sapiens cDNA clone BRTHA3018322 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001013651.1	ILMN_17675	LOC389607	NM_001013651.1	NM_001013651.1		389607	61966756	NM_001013651.1	LOC389607	NP_001013673.1	ILMN_1794131	0000870520	S	2929	GCATCGCCCCTGTGAGTTCTACTTGATTCAAAACTGCCTAAATCCAGCCC	8	-	597471-597520	8p23.3b	Homo sapiens hypothetical gene supported by AK128318 (LOC389607), mRNA.					
Homo sapiens	RefSeq	NM_199043.1	ILMN_22442	C14ORF102	NM_199043.1	NM_199043.1		55051	39932580	NM_199043.1	C14orf102	NP_950244.1	ILMN_2374076	0002680164	A	3235	GGAGCTAGGAGGCGCGAGCAGAGAACGTGTGTGTTAGGAGAACTCGGCTT	14	-	90744578-90744627	14q32.11a	Homo sapiens chromosome 14 open reading frame 102 (C14orf102), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ14051; FLJ10008	FLJ14051; FLJ10008
Homo sapiens	RefSeq	NM_004069.3	ILMN_23048	AP2S1	NM_004069.3	NM_004069.3		1175	70906429	NM_004069.3	AP2S1	NP_004060.2	ILMN_1809957	0006370661	A	838	GCCATAAGCGTCTGTGCGTGGAGTCCCCAATAAACCTGTGGTCCTGCCTG	19	-	52033265-52033314	19q13.32b	Homo sapiens adaptor-related protein complex 2, sigma 1 subunit (AP2S1), transcript variant AP17, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2014052] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16103193] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles [goid 30122] [pmid 10753805] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [pmid 10753805] [evidence TAS]; The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [pmid 10753805] [evidence TAS]; Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism [goid 50690] [pmid 16103193] [evidence EXP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9040778] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 10753805] [evidence NAS]	AP17; CLAPS2; AP17-DELTA	AP17; CLAPS2; AP17-DELTA
Homo sapiens	RefSeq	NM_004069.3	ILMN_23048	AP2S1	NM_004069.3	NM_004069.3		1175	70906429	NM_004069.3	AP2S1	NP_004060.2	ILMN_1662426	0003120228	I	384	CATCTGTGTGGATGTCAATGACAACAACCTGGCTTACCTGGAGGCCATTC	19	-	52034575-52034624	19q13.32b	Homo sapiens adaptor-related protein complex 2, sigma 1 subunit (AP2S1), transcript variant AP17, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2014052] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16103193] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; An AP-type membrane coat adaptor complex that consists of alpha, beta2, mu2 and sigma2 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-2-containing coats are normally found primarily near the plasma membrane, on endocytic vesicles [goid 30122] [pmid 10753805] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [pmid 10753805] [evidence TAS]; The process by which clathrin triskelia are assembled into the ordered structure known as a clathrin cage [goid 48268] [pmid 10753805] [evidence TAS]; Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism [goid 50690] [pmid 16103193] [evidence EXP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9040778] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 10753805] [evidence NAS]	AP17; CLAPS2; AP17-DELTA	AP17; CLAPS2; AP17-DELTA
Homo sapiens	RefSeq	XM_944552.1	ILMN_31656	LOC143941	XM_940353.2	XM_940353.2		143941	113423120	XM_940353.2	LOC143941	XP_945446.1	ILMN_1673563	0003780392	A	617	CTGAACCAATAAAGCCGTCGGGCCTCACCGACTCCGCCTGCTCCTGCGTC				11q23.3d	PREDICTED: Homo sapiens similar to CDNA sequence BC021608, transcript variant 3 (LOC143941), mRNA.					
Homo sapiens	Unigene	Hs.545045	ILMN_108335	HS.545045	Hs.545045		Hs.545045		22846338	BU535897			ILMN_1867777	0003780379	S	150	CTGCTGAGGCCACCAAAAATGTTGTGATATGTAAAGGGAGTGGGCAGCTG	7	+	39581442-39581491		AGENCOURT_10313445 NIH_MGC_141 Homo sapiens cDNA clone IMAGE:6563696 5, mRNA sequence					
Homo sapiens	Unigene	Hs.545838	ILMN_108952	HS.545838	Hs.545838		Hs.545838		2839329	AA779998			ILMN_1895825	0007160576	S	175	CCTGGCTGTCATGCACCAACAGGAAATATCTAGGAGGCTTCTTTGCCACC	9	+	23145939-23145988		zj88e05.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:461984 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001715506.1	ILMN_351798	LOC729537	XM_001715506.1	XM_001715506.1		729537	169179983	XM_001715506.1	LOC729537	XP_001715558.1	ILMN_3306154	0000580164	M	621	ATTCCGATCCCAGCCAGGCCGCCGAATAAGACCAAGGTGAGGACCCAAGA				9q22.1a	PREDICTED: Homo sapiens hypothetical LOC729537 (LOC729537), mRNA.					
Homo sapiens	RefSeq	XM_496145.2	ILMN_34407	LOC440361	XM_496145.2	XM_496145.2		440361	89040276	XM_496145.2	LOC440361	XP_496145.2	ILMN_1716275	0006620671	S	393	CACCAGGATCAGAGTATTGAGGAAACTCAGGGATACCTGGAACCTCCAGG	16	+	31971428-31971466:31975539-31975549	16p11.2a	PREDICTED: Homo sapiens similar to Ig heavy chain V-III region VH26 precursor (LOC440361), mRNA.					
Homo sapiens	RefSeq	NM_101395.1	ILMN_19737	DYRK1A	NM_101395.2	NM_101395.2		1859	116734671	NM_101395.2	DYRK1A	NP_567824.1	ILMN_1713599	0003190064	I	58	CCCGCCATCGTCCCGGCTGAAGTGCAGTGGCACGATCATAGGTGGTCACT	21	+	37661786-37661800:37704742-37704776	21q22.13b	Homo sapiens dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A (DYRK1A), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISS]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8769099] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence ISS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [pmid 9748265] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence ISS]	HP86; DYRK; DYRK1; MNBH; MNB	HP86; DYRK; DYRK1; MNBH; MNB
Homo sapiens	RefSeq	NM_173341.1	ILMN_4709	PHF7	NM_173341.1	NM_173341.1		51533	27894286	NM_173341.1	PHF7	NP_775463.1	ILMN_2375160	0002650326	A	1509	GCTACATGCGGATCCCACGGAACCCACAGGGACTGCTCCTCTCTTAGATC	3	+	52431838-52431887	3p21.1d	Homo sapiens PHD finger protein 7 (PHF7), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp434L1850; HSPC226; NYD-SP6; MGC26088; HSPC045	DKFZp434L1850; HSPC226; NYD-SP6; MGC26088; HSPC045
Homo sapiens	RefSeq	NM_173341.1	ILMN_4709	PHF7	NM_173341.1	NM_173341.1		51533	27894286	NM_173341.1	PHF7	NP_775463.1	ILMN_2375156	0000010037	A	1956	GAGCCAAGCAAAGAGAAGTCTCAGTGGAGCATGAGGAGGGAGCAGTCCAG	3	+	52432494-52432543	3p21.1d	Homo sapiens PHD finger protein 7 (PHF7), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp434L1850; HSPC226; NYD-SP6; MGC26088; HSPC045	DKFZp434L1850; HSPC226; NYD-SP6; MGC26088; HSPC045
Homo sapiens	RefSeq	NM_014455.1	ILMN_2705	ZNF364	NM_014455.1	NM_014455.1		27246	33859667	NM_014455.1	ZNF364	NP_055270.1	ILMN_1811997	0007380382	S	1433	GTTGCCTTGTAACGGATGTTTCCACCTCCTTCTCCAACCTCTACCCCACC	1	+	144399891-144399940	1q21.1b	Homo sapiens zinc finger protein 364 (ZNF364), mRNA.				BCA2; RNF115	BCA2; RNF115
Homo sapiens	RefSeq	NM_198137.1	ILMN_4474	CATSPER4	NM_198137.1	NM_198137.1		378807	62988333	NM_198137.1	CATSPER4	NP_937770.1	ILMN_1740419	0003890059	S	1137	GGTGCTTGAGGCAATACAGGAGAACCTGAGGCAGTACAAGGAGATCCGAG	1	+	26400057-26400106	1p36.11b	Homo sapiens cation channel, sperm associated 4 (CATSPER4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC149223	MGC149223
Homo sapiens	RefSeq	NM_001039496.1	ILMN_308882	C11ORF20	NM_001039496.1	NM_001039496.1		25858	148839349	NM_001039496.1	C11orf20	NP_001034585.1	ILMN_3248086	0004040528	S	314	CGGCAGCTCCATGGAAATCAATCTGGGGGAGAAGGACACTGCATCCCAGA	11	+	63824977-63825026	11q13.1b	Homo sapiens chromosome 11 open reading frame 20 (C11orf20), mRNA.					
Homo sapiens	RefSeq	XM_925980.1	ILMN_44434	LOC442446	XM_925980.1	XM_925980.1		442446	89059531	XM_925980.1	LOC442446	XP_931073.1	ILMN_1692889	0001710082	A	216	GAAGTGTGCAAGGTACACCTGGGCCTCTGCATCAAGATCTGAGGAGAAGG	X	-	38276343-38276356:38276479-38276514	Xp11.4e	PREDICTED: Homo sapiens similar to Nucleolar transcription factor 1 (Upstream binding factor 1) (UBF-1) (Autoantigen NOR-90) (LOC442446), mRNA.					
Homo sapiens	RefSeq	NM_145262.2	ILMN_18995	GLYCTK	NM_145262.2	NM_145262.2		132158	31543062	NM_145262.2	GLYCTK	NP_660305.2	ILMN_1791222	0004920682	S	1618	CTGCGGCCTCGGTGATGGCATAGGTCACATTTTGGGAGTTCAGAGGAGGC	3	+	52302168-52302182:52302183-52302217	3p21.1d	Homo sapiens glycerate kinase (GLYCTK), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16753811] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 16753811] [evidence IDA]	Catalysis of the reaction: ATP + (R)-glycerate = ADP + 3-phospho-(R)-glycerate [goid 8887] [pmid 16753811] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HBeAgBP4A; HBEBP2; HBEBP4; GLYCTK1	HBeAgBP4A; HBEBP2; HBEBP4; GLYCTK1
Homo sapiens	RefSeq	XM_938166.3	ILMN_42416	LOC642956	XM_938166.3	XM_938166.3		642956	169209298	XM_938166.3	LOC642956	XP_943259.1	ILMN_3287239	0000630682	M	121	GTGAAGGAGCTAGGAGTGGGAATAGCTTTGCGAAAAATGGACACAATAGC				15q25.3a	PREDICTED: Homo sapiens hypothetical LOC642956 (LOC642956), mRNA.					
Homo sapiens	RefSeq	XM_938166.3	ILMN_42416	LOC642956	XM_938166.3	XM_938166.3		642956	169209298	XM_938166.3	LOC642956	XP_943259.1	ILMN_3210741	0000990717	A	36	CAGCTCGCCCGCACCCCTCATGGCCACAGTTCAGCAGCTGGAAGGAAGAT				15q25.3a	PREDICTED: Homo sapiens hypothetical LOC642956 (LOC642956), mRNA.					
Homo sapiens	RefSeq	XM_942158.1	ILMN_31892	LOC649813	XM_942158.1	XM_942158.1		649813	89042814	XM_942158.1	LOC649813	XP_947251.1	ILMN_1793670	0000050632	S	830	GCTGCTCCTGTTCCAATCACTCTGGGAACGCTGGACTCATGACAATTGCC					PREDICTED: Homo sapiens hypothetical protein LOC649813 (LOC649813), mRNA.					
Homo sapiens	RefSeq	XM_001725523.1	ILMN_350151	LOC100129147	XM_001725523.1	XM_001725523.1		100129147	169169305	XM_001725523.1	LOC100129147	XP_001725575.1	ILMN_3193999	0000670438	A	2633	GAGGGCGGCAGAAAGGGAGAGGAAGGAAACAGGGCCGGAGAACAATGAGA	6	+	150288990-150289039	6q25.1b	PREDICTED: Homo sapiens hypothetical protein LOC100129147 (LOC100129147), mRNA.					
Homo sapiens	RefSeq	NM_153693.3	ILMN_172478	HOXC6	NM_153693.3	NM_153693.3		3223	100349242	NM_153693.3	HOXC6	NP_710160.1	ILMN_2396039	0001450022	A	1482	GGGCTCGGACCCTGAACTCAGACTCTACAGATTGCCCTCCAAGTGAGGAC	12	+	52710284-52710333	12q13.13f	Homo sapiens homeobox C6 (HOXC6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8870653] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8870653] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8870653] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX3C; HOX3; CP25; HHO.C8	HOX3C; HOX3; CP25; HHO.C8
Homo sapiens	RefSeq	NM_153693.1	ILMN_172478	HOXC6	NM_153693.3	NM_153693.3		3223	100349242	NM_153693.3	HOXC6	NP_710160.1	ILMN_1787334	0006180768	I	377	TTAATTTTGTTTGGCTTTTGGATGATTATAATTATTTTTATTTTTGAATT	12	+	52697285-52697334	12q13.13f	Homo sapiens homeobox C6 (HOXC6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8870653] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8870653] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8870653] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX3C; HOX3; CP25; HHO.C8	HOX3C; HOX3; CP25; HHO.C8
Homo sapiens	RefSeq	XM_942756.1	ILMN_40614	LOC442124	XM_497989.2	XM_497989.2		442124	88978357	XM_497989.2	LOC442124	XP_497989.2	ILMN_1709036	0003400154	A	310	CGACCCCACCCTCCACCCTTATTCCACTGGTGTTTCCATCTCCATGACCC	4	-	190810169-190810218	4q35.2d	PREDICTED: Homo sapiens hypothetical LOC442124 (LOC442124), mRNA.					
Homo sapiens	RefSeq	NM_005069.2	ILMN_13995	SIM2	NM_005069.2	NM_005069.2		6493	7108363	NM_005069.2	SIM2	NP_005060.1	ILMN_1700448	0004260554	I	3554	CTGGATGGTAGGAAGGGATGTGCCCGCCTCTCCACGCACTCAGCTATACC	21	+	37043757-37043806	21q22.13a	Homo sapiens single-minded homolog 2 (Drosophila) (SIM2), transcript variant SIM2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9199934] [evidence TAS]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8661114] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9199934] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	MGC119447; SIM	MGC119447; SIM
Homo sapiens	RefSeq	NM_009586.1	ILMN_13995	SIM2	NM_005069.2	NM_005069.2		6493	7108363	NM_005069.2	SIM2	NP_005060.1	ILMN_1673886	0001510441	A	1064	ATACAAGGAACTTCAGCTGTCCCTGGAGCAGGTGTCCACTGCCAAGTCCC	21	+	37037567-37037616	21q22.13a	Homo sapiens single-minded homolog 2 (Drosophila) (SIM2), transcript variant SIM2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9199934] [evidence TAS]; The process that results in the patterns of cell differentiation that will arise in an embryo [goid 9880] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8661114] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9199934] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	MGC119447; SIM	MGC119447; SIM
Homo sapiens	Unigene	Hs.575465	ILMN_127646	HS.575465	Hs.575465		Hs.575465		83123022	DB376790			ILMN_1881987	0005050746	S	232	CTGACTTGACACAGGTCGGTGTGTCCTATGGAAACTAACATCTGCCCTGG					DB376790 PLACE1 Homo sapiens cDNA clone PLACE1006665 3, mRNA sequence					
Homo sapiens	RefSeq	XM_934665.1	ILMN_34991	LOC654346	XM_934665.1	XM_934665.1		654346	89041221	XM_934665.1	LOC654346	XP_939758.1	ILMN_1766184	0000840669	A	751	CACTGTCCTGCCCAGTGCTCAGAGGTGTGGATCTTGTGTGAAGCTCACTG	17	+	18336561-18336584:18338260-18338285	17p11.2f	PREDICTED: Homo sapiens similar to galectin 9 short isoform, transcript variant 2 (LOC654346), mRNA.					
Homo sapiens	Unigene	Hs.568407	ILMN_120588	HS.568407	Hs.568407		Hs.568407		79821842	DA226018			ILMN_1861756	0006590626	S	482	TGCAAGACTGTGCCCTGTGAGTGAAACGTTTGCAAGACTGTCCCTGTGAG	4	-	187157837-187157847:187157910-187157948		DA226018 BRAWH3 Homo sapiens cDNA clone BRAWH3019594 5, mRNA sequence					
Homo sapiens	RefSeq	NM_025135.2	ILMN_163420	FHOD3	NM_025135.2	NM_025135.2		80206	58331241	NM_025135.2	FHOD3	NP_079411.2	ILMN_1761322	0001300670	S	4550	GTCACCCCATGGCTTGTGTTGCCTGCTACGCATTGACTTGGATCTCCAGG	18	+	32613624-32613673	18q12.2b	Homo sapiens formin homology 2 domain containing 3 (FHOD3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Formactin2; FHOS2	FHOS2; Formactin2
Homo sapiens	Unigene	Hs.374460	ILMN_88401	HS.374460	Hs.374460		Hs.374460		21178167	BQ439091			ILMN_1839609	0000130356	S	544	GCCAGCTCGTCCTTTCAAACTATGTGAGGGCCTACCTTGAGTCACCCCCA	X	-	73388146-73388195		AGENCOURT_7761579 NIH_MGC_70 Homo sapiens cDNA clone IMAGE:6020085 5, mRNA sequence					
Homo sapiens	RefSeq	XM_372648.3	ILMN_46792	LOC390748	XM_939312.2	XM_939312.2		390748	113426581	XM_939312.2	LOC390748	XP_944405.2	ILMN_1796785	0003610400	A	558	CCCCAAGGGTTATGCCTACATAGAGTTTGCCACCAAGGGCTCCGTGCAGG				16q24.3a	PREDICTED: Homo sapiens similar to poly(A)binding protein nuclear-like 1 (LOC390748), mRNA.					
Homo sapiens	RefSeq	NM_002715.2	ILMN_24475	PPP2CA	NM_002715.2	NM_002715.2		5515	57222566	NM_002715.2	PPP2CA	NP_002706.1	ILMN_1722858	0003190647	S	1935	CCCTTCCTGTAAGACGATGTGACTGCACAAGAGCACTGCAGTGTTTTTCA	5	-	133561205-133561254	5q31.1d	Homo sapiens protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform (PPP2CA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 11007961] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 11007961] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11007961] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11007961] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11007961] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [pmid 11007961] [evidence NAS]	The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IEA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA replication [goid 6275] [pmid 11007961] [evidence NAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 2849764] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 11007961] [evidence TAS]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [pmid 11007961] [evidence NAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11007961] [evidence TAS]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 11007961] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [pmid 11007961] [evidence NAS]; A series of molecular signals in which an ion or small molecule is formed or released into the cytosol, thereby helping relay the signal within the cell [goid 19932] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [pmid 11007961] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [pmid 11360189] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42518] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 11360189] [evidence NAS]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9847399] [evidence IPI]	PP2CA; RP-C; PP2Ac	PP2CA; RP-C; PP2Ac
Homo sapiens	RefSeq	NM_002715.2	ILMN_24475	PPP2CA	NM_002715.2	NM_002715.2		5515	57222566	NM_002715.2	PPP2CA	NP_002706.1	ILMN_2196097	0001740240	S	2207	TGTCACATTGTTGGTGTGCACTTTGTGGGTTCTTCCTGCATATTAACTTG	5	-	133560933-133560982	5q31.1d	Homo sapiens protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform (PPP2CA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 11007961] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 11007961] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11007961] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11007961] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11007961] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [pmid 11007961] [evidence NAS]	The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IEA]; Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of DNA replication [goid 6275] [pmid 11007961] [evidence NAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 2849764] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 11007961] [evidence TAS]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [pmid 11007961] [evidence NAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11007961] [evidence TAS]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 11007961] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus [goid 10033] [pmid 11007961] [evidence NAS]; A series of molecular signals in which an ion or small molecule is formed or released into the cytosol, thereby helping relay the signal within the cell [goid 19932] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of the activity of the Wnt receptor mediated signal transduction pathway [goid 30111] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [pmid 11007961] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development [goid 40008] [pmid 11360189] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat3 protein [goid 42518] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11007961] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 11360189] [evidence NAS]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9847399] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9847399] [evidence IPI]	PP2CA; RP-C; PP2Ac	PP2CA; RP-C; PP2Ac
Homo sapiens	RefSeq	XM_292958.5	ILMN_38557	LOC344167	XM_292958.5	XM_292958.5		344167	88953293	XM_292958.5	LOC344167	XP_292958.5	ILMN_1726940	0004900221	S	355	GCCGACATGGCCCTCTACTGCGGCGACAACTTCGGACGGCCCTTCGCGCA	2	-	88532837-88532851:88533139-88533173	2p11.2c	PREDICTED: Homo sapiens similar to forkhead box I2 (LOC344167), mRNA.					
Homo sapiens	RefSeq	XM_497450.2	ILMN_184110	LOC441722	XM_497450.3	XM_497450.3		441722	113425154	XM_497450.3	LOC441722	XP_497450.2	ILMN_1800562	0004010026	S	144	AACCAGTCAGTAACAGAGACAAGATTAGAATTCCCATGTTCTTGAGTCTC	15	+	33171621-33171670	15q14b	PREDICTED: Homo sapiens hypothetical LOC441722 (LOC441722), mRNA.					
Homo sapiens	RefSeq	NR_002984.1	ILMN_174099	SNORA56	NR_002984.1	NR_002984.1		677835	91680851	NR_002984.1	SNORA56		ILMN_3240280	0004060025	S	45	AGGGAGTCAGTCTGCAACAGTAAGTGGTGAGTTCTTCTGTCCAGCGTCAG	X	+	153656511-153656560	Xq28g	Homo sapiens small nucleolar RNA, H/ACA box 56 (SNORA56), small nucleolar RNA.				ACA56	ACA56
Homo sapiens	RefSeq	XM_942897.1	ILMN_37225	LOC647582	XM_942897.1	XM_942897.1		647582	89037696	XM_942897.1	LOC647582	XP_947990.1	ILMN_1713788	0002360458	S	3	GCCGAACTGCTGCAGAGAAACAGGCTTCAAGAGATATGACTGTGCTCCTC					PREDICTED: Homo sapiens hypothetical protein LOC647582 (LOC647582), mRNA.					
Homo sapiens	Unigene	Hs.552561	ILMN_111064	HS.552561	Hs.552561		Hs.552561		58568978	BP396343			ILMN_1890741	0000580477	S	249	CACACAGAGAAATCCAAACTCCCCATCAGGACCCCAGTCTTCCCAAACCC	8	-	6960358-6960407		BP396343 Homo sapiens pancreatic islet Homo sapiens cDNA clone hbt09690 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001001961.1	ILMN_13949	OR13C3	NM_001001961.1	NM_001001961.1		138803	50233845	NM_001001961.1	OR13C3	NP_001001961.1	ILMN_1735278	0003060180	S	768	GCAAATGAATTCAGCCACAGGAAGACGCAAGGCATTTTCCACGTGCTCAG	9	-	107298277-107298326	9q31.1d	Homo sapiens olfactory receptor, family 13, subfamily C, member 3 (OR13C3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR37G; OR9-8	OR37G; OR9-8
Homo sapiens	RefSeq	XM_936592.1	ILMN_30576	LOC647535	XM_936592.1	XM_936592.1		647535	88981075	XM_936592.1	LOC647535	XP_941685.1	ILMN_1681501	0007610278	S	21	GGTAGCTGGTGTTTCTCCTACCCCCACCAAGCCCTGTGTTATGGAAGCTC					PREDICTED: Homo sapiens similar to ring finger protein 185 (LOC647535), mRNA.					
Homo sapiens	Unigene	Hs.301755	ILMN_85400	HS.301755	Hs.301755		Hs.301755		21753646	AK094562			ILMN_1826572	0003990347	S	2474	GGCTGTGCTGGGGATGAGCGCCGAGTGGCCATGGACTAAGTGAAGGAAAT	14	+	100608862-100608911		Homo sapiens cDNA FLJ37243 fis, clone BRAMY2004387					
Homo sapiens	RefSeq	NM_001004690.1	ILMN_23603	OR2M5	NM_001004690.1	NM_001004690.1		127059	52317205	NM_001004690.1	OR2M5	NP_001004690.1	ILMN_1699872	0001240563	S	773	TGTACATACGGCCCACATCTGATCGCTCCCCTATGCAGGACAAGCTGGTG	1	+	246375845-246375894	1q44f	Homo sapiens olfactory receptor, family 2, subfamily M, member 5 (OR2M5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2M5P	OR2M5P
Homo sapiens	RefSeq	NM_016161.1	ILMN_19436	A4GNT	NM_016161.1	NM_016161.1		51146	7705858	NM_016161.1	A4GNT	NP_057245.1	ILMN_1680754	0006480136	S	1053	CCACATGAACCAGGAGGGGCGGGCTGTGATTAGAGGAAGCAACACACTGG	3	-	139325896-139325945	3q22.3b	Homo sapiens alpha-1,4-N-acetylglucosaminyltransferase (A4GNT), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10430883] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10430883] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 10430883] [evidence TAS]; The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 10430883] [evidence TAS]; The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [pmid 10430883] [evidence IDA]	Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [pmid 10430883] [evidence IDA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	alpha4GnT; MGC149493	alpha4GnT; MGC149493
Homo sapiens	RefSeq	NM_006015.3	ILMN_171808	ARID1A	NM_006015.4	NM_006015.4		8289	117968607	NM_006015.4	ARID1A	NP_006006.3	ILMN_1734496	0002030471	I	4761	GTGTCTCTGCACCCCCTGGCACCAATGCCCAGCAAAACATGCCACCACAA	1	+	26973693-26973742	1p36.11a	Homo sapiens AT rich interactive domain 1A (SWI-like) (ARID1A), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12200431] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [pmid 12200431] [evidence IDA]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [pmid 12200431] [evidence IDA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 12200431] [evidence IDA]; The movement of nucleosomes along a DNA fragment [goid 42766] [pmid 12200431] [evidence TAS]; Any series of molecular signals generated as a consequence of a glucocorticoid binding to its receptor [goid 42921] [pmid 12200431] [evidence IDA]; Maintenance of transcription by remodelling of chromatin into an 'open configuration'. Once established, this regulation is mitotically stable and is maintained over many cell divisions. It is also heritable [goid 48096] [pmid 12200431] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10757798] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12200431] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 12200431] [evidence IDA]	BAF250; B120; P270; SMARCF1; C1orf4; BAF250a; BM029	BAF250; B120; P270; SMARCF1; C1orf4; BAF250a; BM029
Homo sapiens	RefSeq	XR_037576.1	ILMN_339598	LOC100133180	XR_037576.1	XR_037576.1		100133180	169216690	XR_037576.1	LOC100133180		ILMN_3239326	0002190433	S	114	TATGGTGGACGACCTTGATTTTCCACTTCTCTTCAGGGATGAGTCATGTG	X	+	73257534-73257583	Xq13.2b-q13.2c	PREDICTED: Homo sapiens misc_RNA (LOC100133180), miscRNA.					
Homo sapiens	RefSeq	XM_936705.1	ILMN_163743	H2BFM	XM_210048.5	XM_210048.5		286436	113430000	XM_210048.5	H2BFM	XP_210048.4	ILMN_1675025	0004610093	A	1453	TTGGTCAAGAGGGAAACAGGGTCAGGGCAAGATGGTAGCCAGAGCTTCCC	X	+	103183165-103183214	Xq22.2b	PREDICTED: Homo sapiens H2B histone family, member M (H2BFM), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	XM_931494.1	ILMN_34709	LOC643341	XM_931494.1	XM_931494.1		643341	88972600	XM_931494.1	LOC643341	XP_936587.1	ILMN_2058369	0003290484	S	140	TCAAACCCTCCGCAGGACCCGCCAACCTGGACGCTTCCGAAGCCCCGCTT	4	-	4008345-4008380:4008896-4008909	4p16.2b	PREDICTED: Homo sapiens hypothetical LOC643341 (LOC643341), mRNA.					
Homo sapiens	RefSeq	XM_001721514.1	ILMN_344803	LOC100133528	XM_001721514.1	XM_001721514.1		100133528	169205414	XM_001721514.1	LOC100133528	XP_001721566.1	ILMN_3232806	0001410689	I	972	TTAGTTTTTTGTAATTGCAAATTATATTTTTGCTGCTGATATATTAGAAT					PREDICTED: Homo sapiens similar to HIG1 domain family, member 1A (LOC100133528), mRNA.					
Homo sapiens	RefSeq	XM_001721514.1	ILMN_344803	LOC100133528	XM_001721514.1	XM_001721514.1		100133528	169205414	XM_001721514.1	LOC100133528	XP_001721566.1	ILMN_3210565	0003990376	A	177	TGGAATAGCAGGTTTTGCAGCAATTGTTGCATATGGATTATACAAACTGA					PREDICTED: Homo sapiens similar to HIG1 domain family, member 1A (LOC100133528), mRNA.					
Homo sapiens	RefSeq	XR_017380.2	ILMN_179087	LOC401640	XR_017380.2	XR_017380.2		401640	169191959	XR_017380.2	LOC401640		ILMN_3290385	0002320102	M	458	AGCTAGTGGTGATAGCACACAACGTGGATCCCATCGGGCTGGTTATCTTC	10	-	33386836-33386885	10p11.22b	PREDICTED: Homo sapiens misc_RNA (LOC401640), miscRNA.					
Homo sapiens	Unigene	Hs.542517	ILMN_106345	HS.542517	Hs.542517		Hs.542517		2786493	AA746507			ILMN_1853450	0003780397	S	207	ATCCAGACCCCTCAGGTCATGGGAAGAACAGACTGGGATGTGGCCAGGAC					nw62h12.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:1251239 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004605.2	ILMN_3446	SULT2B1	NM_004605.2	NM_004605.2		6820	31563387	NM_004605.2	SULT2B1	NP_004596.2	ILMN_1727589	0001170066	A	879	ATGAAGGCCAACACCATGTCCAACTACACGCTGCTGCCTCCCAGCCTGCT	19	+	49100095-49100144	19q13.32c	Homo sapiens sulfotransferase family, cytosolic, 2B, member 1 (SULT2B1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9799594] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11416019] [evidence EXP]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 12145317] [evidence IDA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 9799594] [evidence IDA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + an alcohol = adenosine 3',5'-bisphosphate + an alkyl sulfate [goid 4027] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenolic steroid = adenosine 3',5'-bisphosphate + steroid O-sulfate [goid 50294] [pmid 12145317] [evidence IDA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenolic steroid = adenosine 3',5'-bisphosphate + steroid O-sulfate [goid 50294] [pmid 9799594] [evidence IDA]	HSST2	HSST2
Homo sapiens	RefSeq	NM_004605.2	ILMN_3446	SULT2B1	NM_004605.2	NM_004605.2		6820	31563387	NM_004605.2	SULT2B1	NP_004596.2	ILMN_1705674	0005340440	I	141	ACCCTGAGAACTCCAGCACCCACCTCCCTACTCTCCCTCATGGCGTCTCC	19	+	49079133-49079171:49079172-49079182	19q13.32c	Homo sapiens sulfotransferase family, cytosolic, 2B, member 1 (SULT2B1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9799594] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11416019] [evidence EXP]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 12145317] [evidence IDA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [pmid 9799594] [evidence IDA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + an alcohol = adenosine 3',5'-bisphosphate + an alkyl sulfate [goid 4027] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenolic steroid = adenosine 3',5'-bisphosphate + steroid O-sulfate [goid 50294] [pmid 12145317] [evidence IDA]; Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a phenolic steroid = adenosine 3',5'-bisphosphate + steroid O-sulfate [goid 50294] [pmid 9799594] [evidence IDA]	HSST2	HSST2
Homo sapiens	RefSeq	NM_182541.2	ILMN_18732	TMEM31	NM_182541.2	NM_182541.2		203562	55770865	NM_182541.2	TMEM31	NP_872347.2	ILMN_1710312	0007000739	S	539	GGAAAAGATCGGACTGCCCATCATACTCCACCTCTTCGCACTCTCCACCC	X	+	102855423-102855472	Xq22.2a	Homo sapiens transmembrane protein 31 (TMEM31), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ27357; MGC39655	MGC39655; FLJ27357
Homo sapiens	RefSeq	XM_936226.1	ILMN_36989	LOC653879	XM_936226.1	XM_936226.1		653879	89057119	XM_936226.1	LOC653879	XP_941319.1	ILMN_1713182	0005560195	S	121	GAATCTGCCAGCCTCCTGCGATCAGAAGAGACCAAGGAAAATGAGGGTTT					PREDICTED: Homo sapiens similar to Complement C3 precursor (LOC653879), mRNA.					
Homo sapiens	RefSeq	NM_001013644.1	ILMN_18133	LOC388692	NM_001013644.1	NM_001013644.1		388692	61966744	NM_001013644.1	LOC388692	NP_001013666.1	ILMN_2199554	0003830615	S	2987	CTCTTGATAAGAGACCACTGGCCGTGGGCGGGTTCTGGACAGTTTACAGA	1	+	147557964-147558013	1q21.1e	Homo sapiens hypothetical gene supported by AK123662 (LOC388692), mRNA.					
Homo sapiens	RefSeq	XM_932937.1	ILMN_45482	LOC645492	XM_932937.1	XM_932937.1		645492	88997843	XM_932937.1	LOC645492	XP_938030.1	ILMN_1691123	0002450397	S	323	AGAAATCTTCACAAACTCAGCTTCAAGGATGGGTCAGAGCCTTGGAAACT	6	-	142272738-142272787		PREDICTED: Homo sapiens hypothetical protein LOC645492 (LOC645492), mRNA.					
Homo sapiens	RefSeq	XM_938780.1	ILMN_36465	LOC649711	XM_938780.1	XM_938780.1		649711	88952303	XM_938780.1	LOC649711	XP_943873.1	ILMN_1737837	0003840093	S	2221	AGCTGTCACCTTAGGGTAGACTGAAAGGCAATGTACTGATTAGATTTGGC					PREDICTED: Homo sapiens hypothetical protein LOC649711 (LOC649711), mRNA.					
Homo sapiens	RefSeq	XM_001717025.1	ILMN_342765	LOC342293	XM_001717025.1	XM_001717025.1		342293	169210362	XM_001717025.1	LOC342293	XP_001717077.1	ILMN_3208430	0006560528	A	300	CTCCCACAGTATGGAGGAATGTGACGCCCTCTGTACCAGTCTAGCCATCA				16p12.1c	PREDICTED: Homo sapiens similar to hCG18626 (LOC342293), mRNA.					
Homo sapiens	RefSeq	NM_001005193.1	ILMN_173335	OR7G2	NM_001005193.1	NM_001005193.1		390882	52353345	NM_001005193.1	OR7G2	NP_001005193.1	ILMN_1694051	0000830041	S	785	GTGGGTCTCACCTCTCCATTGTTCTCTTGTTCTATGGGGCAGGTTTGGGG	19	-	9213148-9213197	19p13.2d	Homo sapiens olfactory receptor, family 7, subfamily G, member 2 (OR7G2), mRNA.				OST260; OR19-6	OR19-6; OST260
Homo sapiens	RefSeq	NM_181646.2	ILMN_29627	ZNF804B	NM_181646.2	NM_181646.2		219578	37202115	NM_181646.2	ZNF804B	NP_857597.1	ILMN_1694080	0001170291	S	4291	GACTCCAACCATTATCCCTGCACACCCCACTTTCTTAGCAGGTCATCCCC	7	+	88803339-88803388	7q21.13a	Homo sapiens zinc finger protein 804B (ZNF804B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ32110	FLJ32110
Homo sapiens	RefSeq	NM_025248.1	ILMN_6676	SNIP	NM_025248.1	NM_025248.1		80725	45592956	NM_025248.1	SNIP	NP_079524.1	ILMN_1805623	0003180630	S	3630	GGCCCAGCAGCAGGCCACTAAACCATCTAAAGAGATGAGCGGGTCGAATG	17	-	33943155-33943192:33953584-33953595	17q12c	Homo sapiens SNAP25-interacting protein (SNIP), mRNA.				KIAA1684	KIAA1684
Homo sapiens	Unigene	Hs.536336	ILMN_103062	HS.536336	Hs.536336		Hs.536336		22702851	BU188867			ILMN_1849192	0002350719	S	548	CAGCTGTTAGGTTTGAGGGGCGTATGGGGCAGGCGACTGAACTGCAGAGT	12	+	120990654-120990703		AGENCOURT_7959481 NIH_MGC_72 Homo sapiens cDNA clone IMAGE:6165391 5, mRNA sequence					
Homo sapiens	RefSeq	NM_018948.2	ILMN_4328	ERRFI1	NM_018948.2	NM_018948.2		54206	21314673	NM_018948.2	ERRFI1	NP_061821.1	ILMN_1665510	0007100639	S	2719	GCTGTGGCTGCTTCACTTAGATGCAGTGAGACACATAGTTGGTGTTCCGA	1	-	7994689-7994738	1p36.23b	Homo sapiens ERBB receptor feedback inhibitor 1 (ERRFI1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10749885] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 10749885] [evidence TAS]	Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [pmid 10749885] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GENE-33; MIG-6; RALT; MIG6	GENE-33; MIG-6; RALT; MIG6
Homo sapiens	RefSeq	NM_005288.1	ILMN_9762	GPR12	NM_005288.1	NM_005288.1		2835	4885294	NM_005288.1	GPR12	NP_005279.1	ILMN_1703765	0000160053	S	928	AAAGCGCTCTGTCTCATTTGCTGCGGCTGCATCCCGTCCAGTCTCGCCCA	13	-	26230987-26231036	13q12.13c	Homo sapiens G protein-coupled receptor 12 (GPR12), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8530049] [evidence TAS]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8530049] [evidence TAS]	Combining with lysosphingolipid or lysophosphatidic acid to initiate a change in cell activity [goid 1619] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	GPCR12; MGC138351; MGC138349; GPCR21	GPCR12; MGC138351; MGC138349; GPCR21
Homo sapiens	RefSeq	XR_039881.1	ILMN_338753	LOC729513	XR_039881.1	XR_039881.1		729513	169210329	XR_039881.1	LOC729513		ILMN_3222998	0001660193	A	1984	TGTGTGAGTGCTACATCTCAATTGCCGATTGCGCTGCTGTGCAGGAATGG				16q22.1f	PREDICTED: Homo sapiens misc_RNA (LOC729513), miscRNA.					
Homo sapiens	RefSeq	NM_201435.2	ILMN_27533	CCDC62	NM_201435.2	NM_201435.2		84660	75677375	NM_201435.2	CCDC62	NP_958843.2	ILMN_1663370	0002450500	I	2772	TAGCTCGAGGTCCTTCTGTCCCAAGCTGAGCAGAGCCCCATCTTTCTGGG	12	+	121877453-121877502	12q24.31d	Homo sapiens coiled-coil domain containing 62 (CCDC62), transcript variant 2, mRNA.				aaa; FLJ25432; TSP-NY; FLJ40344	aaa; FLJ25432; TSP-NY; FLJ40344
Homo sapiens	RefSeq	NM_001537.2	ILMN_3025	HSBP1	NM_001537.2	NM_001537.2		3281	54234018	NM_001537.2	HSBP1	NP_001528.1	ILMN_1667030	0005130139	S	1699	GACCATCCGAAACCTGCGTCCCTGGTGATGTTCTCAAGCCTCGGAAGTGG	16	+	82403903-82403952	16q23.3b	Homo sapiens heat shock factor binding protein 1 (HSBP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9649501] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9649501] [evidence TAS]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9649501] [evidence TAS]	DKFZp686D1664; NPC-A-13; DKFZp686O24200	DKFZp686D1664; NPC-A-13; DKFZp686O24200
Homo sapiens	RefSeq	XM_001714821.1	ILMN_347400	LOC100130207	XM_001714821.1	XM_001714821.1		100130207	169165341	XM_001714821.1	LOC100130207	XP_001714873.1	ILMN_3267333	0005550161	M	955	CTTTCCCACAGGAAGTCGGAGAGGCTGCTTGTTGCTGAGAGCTGGCCTTG				3p26.2b	PREDICTED: Homo sapiens hypothetical protein LOC100130207 (LOC100130207), mRNA.					
Homo sapiens	Unigene	Hs.562844	ILMN_115858	HS.562844	Hs.562844		Hs.562844		6697932	AW291296			ILMN_1827057	0002230520	S	213	CCTTAGACAGAGCGGGAGATTTGGACACAGAGACACCAGGAGGAGGCCAC	2	+	242134943-242134992		UI-H-BI2-agg-b-01-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2724048 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001523.1	ILMN_21289	HAS1	NM_001523.1	NM_001523.1		3036	4504338	NM_001523.1	HAS1	NP_001514.1	ILMN_1754716	0006270300	S	1835	CCCGAGCCACGAACTTGCTGGGTGGTTCTCTGGGCCTCAGTTTCCCTCCT	19	-	56908379-56908428	19q13.33e	Homo sapiens hyaluronan synthase 1 (HAS1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9169154] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars [goid 6024] [pmid 8798544] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8798544] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)](n) + 2n UDP [goid 50501] [evidence IEA]	HAS	HAS
Homo sapiens	RefSeq	NM_001005199.1	ILMN_165046	OR8H1	NM_001005199.1	NM_001005199.1		219469	52353289	NM_001005199.1	OR8H1	NP_001005199.1	ILMN_1681457	0002900128	S	413	GGCTGTGTTGCGCTCTTGTCACTGGGCCCTATGTGATTAGCTTTATCAAC	11	-	56058076-56058125	11q11c	Homo sapiens olfactory receptor, family 8, subfamily H, member 1 (OR8H1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-180	OR11-180
Homo sapiens	RefSeq	NM_001005199.1	ILMN_165046	OR8H1	NM_001005199.1	NM_001005199.1		219469	52353289	NM_001005199.1	OR8H1	NP_001005199.1	ILMN_2187002	0000010215	S	532	TGCGACACGTCTCCAATTTTAGCTCTGTCCTGCATGGACACATACGACAT	11	-	56057957-56058006	11q11c	Homo sapiens olfactory receptor, family 8, subfamily H, member 1 (OR8H1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-180	OR11-180
Homo sapiens	Unigene	Hs.344350	ILMN_86831	HS.344350	Hs.344350		Hs.344350		15496013	BI603074			ILMN_1877270	0005220039	S	503	ACTAGGGGGACCCTTCGCTGTGGAAAAATCGGTGCTGCGGGAAAGGCAAG	12	+	45053701-45053750		603251294F1 NIH_MGC_96 Homo sapiens cDNA clone IMAGE:5303182 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001721108.1	ILMN_351494	LOC100131540	XM_001721108.1	XM_001721108.1		100131540	169178953	XM_001721108.1	LOC100131540	XP_001721160.1	ILMN_3218305	0006290364	A	4004	GCCTTCAGGTAGCAGCCAGTTTGGAGGAAATGAGGACCCAGACGTCCATC				9q22.1d	PREDICTED: Homo sapiens hypothetical protein LOC100131540 (LOC100131540), mRNA.					
Homo sapiens	RefSeq	XM_001129965.2	ILMN_163404	LOC728224	XM_001129965.2	XM_001129965.2		728224	169210924	XM_001129965.2	LOC728224	XP_001129965.1	ILMN_3206466	0007000048	A	1	ATGGTCAACTCCTGTTGTGGCTCCGTGTGCTCTGACCAAGGCTGTGGCCA	17	-	36507812-36507861	17q21.2a	PREDICTED: Homo sapiens hypothetical LOC728224, transcript variant 2 (LOC728224), mRNA.					
Homo sapiens	RefSeq	NM_033182.5	ILMN_11743	FBXO44	NM_033182.5	NM_033182.5		93611	62388870	NM_033182.5	FBXO44	NP_149438.2	ILMN_2325625	0005560451	A	2134	ACAGGCTGGGGTTGGGGTGTGTGGACATCTCTGGGCAGCTCTTGAGTCCA	1	+	11645157-11645206	1p36.22b	Homo sapiens F-box protein 44 (FBXO44), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Fbx44; FBG3; DKFZp781J0852; FBX30; Fbxo6a; MGC14140	Fbx44; FBG3; DKFZp781J0852; FBX30; Fbxo6a; MGC14140
Homo sapiens	RefSeq	Hs.577605	ILMN_178003	LOC728181	XM_001126787.1	XM_001126787.1		728181	113423330	XM_001126787.1	LOC728181	XP_001126787.1	ILMN_1849267	0002570689	S	201	GGGGGACCATATCGCTCAAAAGGAAGGTCTGTTTGGGGACGTTTCCTCCC	12	-	46685723-46685772	12q13.11c	PREDICTED: Homo sapiens hypothetical protein LOC728181 (LOC728181), mRNA.					
Homo sapiens	RefSeq	XM_943796.1	ILMN_32360	USP6NL	XM_943800.2	XM_943800.2		9712	113421829	XM_943800.2	USP6NL	XP_948893.1	ILMN_1659696	0006860370	A	167	GGACGAGAAGGTGCAGAGATTGAACCTTGGGAAGATGCTGATTACCTTGT				10p14a	PREDICTED: Homo sapiens USP6 N-terminal like, transcript variant 6 (USP6NL), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]		
Homo sapiens	RefSeq	XM_934069.1	ILMN_33200	LOC646943	XM_934069.1	XM_934069.1		646943	89040241	XM_934069.1	LOC646943	XP_939162.1	ILMN_1662651	0000610603	S	1	ATGAATTCAGGGACAGGGGCAGCACCAGAAGAGAGCAAGCTGGGGCCTGG	16	-	25177301-25177350		PREDICTED: Homo sapiens hypothetical protein LOC646943 (LOC646943), mRNA.					
Homo sapiens	RefSeq	NM_033387.2	ILMN_8648	FAM78A	NM_033387.3	NM_033387.3		286336	118766331	NM_033387.3	FAM78A	NP_203745.2	ILMN_1801304	0006250184	S	3679	TGTTGGAGCACAGGCCCCAGGCTTCCTGCCAGGGCCCCGATTCTTCTTAT	9	-	134133672-134133721	9q34.13a	Homo sapiens family with sequence similarity 78, member A (FAM78A), mRNA.				FLJ00024; C9orf59; RP11-544A12.6	FLJ00024; C9orf59; RP11-544A12.6
Homo sapiens	RefSeq	NM_001114632.1	ILMN_341021	JMJD7	NM_001114632.1	NM_001114632.1		100137047	167860113	NM_001114632.1	JMJD7	NP_001108104.1	ILMN_3236838	0007160446	S	719	GTGGATGAAGAGGCCATGGAGAAGGTGCCCTGGATCCCACTGGACCCCTT	15	+	42128726-42128749:42128979-42129004		Homo sapiens jumonji domain containing 7 (JMJD7), mRNA.				FLJ20656; FLJ78330; FLJ77014; FLJ20543; FLJ20807	FLJ20656; FLJ78330; FLJ77014; FLJ20543; FLJ20807
Homo sapiens	RefSeq	XM_001723265.1	ILMN_344868	LOC100133077	XM_001723265.1	XM_001723265.1		100133077	169178658	XM_001723265.1	LOC100133077	XP_001723317.1	ILMN_3287106	0001050136	M	283	ACCAATCCTGCCAACACCCTGATCTTGGACCTCCAGCCTCCAGGACTGAG				9q34.3g	PREDICTED: Homo sapiens hypothetical protein LOC100133077 (LOC100133077), mRNA.					
Homo sapiens	RefSeq	NM_032874.2	ILMN_41609	KIAA1984	NM_001039374.3	NM_001039374.3		84960	89886469	NM_001039374.3	KIAA1984	NP_001034463.3	ILMN_1700203	0003390450	S	1644	GAAGAAGTAGCCCCGCCGCCCCGCTCCCTGCTTTGCTACACAAATAAACA	9	+	138821954-138821963:138821964-138822003	9q34.3e	Homo sapiens KIAA1984 (KIAA1984), mRNA.				PARF; RP11-216L13.9; bA216L13.7; MGC15438; RP11-216L13.7	PARF; RP11-216L13.9; bA216L13.7; MGC15438; RP11-216L13.7
Homo sapiens	RefSeq	NM_032735.1	ILMN_9598	MGC13168	NM_032735.1	NM_032735.1		84821	14249355	NM_032735.1	MGC13168	NP_116124.1	ILMN_1720600	0001070750	S	1326	GTTCAGTCTGGAAAAGCCAGAGATGACTCAAAGTGGGGAGGGGGCTTCCG	12	-	68363643-68363692		Homo sapiens hypothetical protein MGC13168 (MGC13168), mRNA.					
Homo sapiens	RefSeq	XM_371801.4	ILMN_169681	MBOAT1	NM_001080480.1	NM_001080480.1		154141	122937403	NM_001080480.1	MBOAT1	NP_001073949.1	ILMN_1764082	0005490414	A	2689	GAGCTGAAGAGGGGCTGCTGTTTTCCGAATGTTTTCCATTTCACAGGCGC	6	-	20209754-20209803	6p22.3c	Homo sapiens membrane bound O-acyltransferase domain containing 1 (MBOAT1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	OACT1; dJ434O11.1; MGC44669	
Homo sapiens	RefSeq	NM_001080480.1	ILMN_169681	MBOAT1	NM_001080480.1	NM_001080480.1		154141	122937403	NM_001080480.1	MBOAT1	NP_001073949.1	ILMN_2278550	0001030309	I	162	TGTTGCGGGCTGGGACAGGGGCAGCCACCTCCCGAAGATGCAGGATGGCA	6	-	20320438-20320444:20320445-20320487	6p22.3c	Homo sapiens membrane bound O-acyltransferase domain containing 1 (MBOAT1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	OACT1; dJ434O11.1; MGC44669	OACT1; dJ434O11.1; MGC44669
Homo sapiens	RefSeq	XM_937932.1	ILMN_36906	LOC648855	XM_937932.1	XM_937932.1		648855	88970804	XM_937932.1	LOC648855	XP_943025.1	ILMN_1806075	0005670053	S	111	GGGTGAGGGCAAGGATGAGATAGAGTTCACTGAGGCTGAGAGCAGCATGA					PREDICTED: Homo sapiens similar to tubulin, beta 8 (LOC648855), mRNA.					
Homo sapiens	RefSeq	XM_001725558.1	ILMN_335638	LOC100128274	XM_001725558.1	XM_001725558.1		100128274	169180115	XM_001725558.1	LOC100128274	XP_001725610.1	ILMN_3253787	0000050075	M	2170	CCACCACGGCACATGTATACCTGCACATTCTGCACATGTACCCCAGAACT	9	-	32433855-32433904	9p21.1a	PREDICTED: Homo sapiens hypothetical protein LOC100128274 (LOC100128274), mRNA.					
Homo sapiens	RefSeq	NM_000892.2	ILMN_18568	KLKB1	NM_000892.3	NM_000892.3		3818	78191797	NM_000892.3	KLKB1	NP_000883.2	ILMN_1800468	0007400240	S	2038	TTCTGAGCCTGGGGGGTCCTCATCTGCAAAGCATGGAGAGTGGCATCTTC	4	+	187179416-187179465	4q35.2a	Homo sapiens kallikrein B, plasma (Fletcher factor) 1 (KLKB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 1993180] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]; An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 1993180] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	KLK3	KLK3
Homo sapiens	Unigene	Hs.545074	ILMN_108359	HS.545074	Hs.545074		Hs.545074		2238550	AA503583			ILMN_1914641	0006330446	S	121	ACGGCAAAATCCCATTCACAGTCTTATTCTCCTTCCACAGCCAAACACTT	7	+	30536432-30536465		ng07e12.s1 NCI_CGAP_Li1 Homo sapiens cDNA clone IMAGE:928750, mRNA sequence					
Homo sapiens	RefSeq	NM_152493.2	ILMN_7745	ZNF362	NM_152493.2	NM_152493.2		149076	38570114	NM_152493.2	ZNF362	NP_689706.2	ILMN_1686968	0007040270	S	2693	TTCTCTGCCCCCACCCCCGGCCCTTTGTTTGACTTGCGTCGTCTGATACT	1	+	33538494-33538543	1p35.1a	Homo sapiens zinc finger protein 362 (ZNF362), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP11-415J8.1; MGC138318	RP11-415J8.1; MGC138318
Homo sapiens	RefSeq	NM_198271.2	ILMN_3851	LMOD3	NM_198271.2	NM_198271.2		56203	54607115	NM_198271.2	LMOD3	NP_938012.2	ILMN_1785703	0001850561	S	3155	CCCTAGAAATTAGAAAATCAAGCTTTGGGCCAGGTGCGGTGGCTCATGCC	3	-	69239594-69239643	3p14.1b	Homo sapiens leiomodin 3 (fetal) (LMOD3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]	DKFZp313F0135	DKFZp313F0135
Homo sapiens	RefSeq	NM_015372.1	ILMN_309034	C22ORF24	NM_015372.1	NM_015372.1		25775	7661723	NM_015372.1	C22orf24	NP_056187.1	ILMN_3249095	0001820333	S	992	AGACTGCTGACCAAGCCCGAACACTAAATCAATGGGGGATTAGGGGCTCC	22	-	32329712-32329761	22q12.3a	Homo sapiens chromosome 22 open reading frame 24 (C22orf24), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HSN44A4A	HSN44A4A
Homo sapiens	RefSeq	NM_152753.2	ILMN_844	SCUBE3	NM_152753.2	NM_152753.2		222663	31377567	NM_152753.2	SCUBE3	NP_689966.2	ILMN_1659359	0000240070	S	4848	GTCCATGCCCAAGCCCAAAGCCTGCACACATTCTGCCCTTAATCCAAGTG	6	+	35218342-35218391	6p21.31c	Homo sapiens signal peptide, CUB domain, EGF-like 3 (SCUBE3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; A network of glycoproteins; proteins with covalently attached sugar units, either bonded via the hydroxyl group of serine or threonine (O glycosylated) or through the amino terminal of asparagine (N glycosylated) [goid 48222] [pmid 15234972] [evidence NAS]	The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 15234972] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of nonidentical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51291] [pmid 15234972] [evidence IPI]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15234972] [evidence IPI]	DKFZp686B09105; DKFZp686D20108; FLJ34743; DKFZp686B1223; CEGF3	DKFZp686B09105; DKFZp686D20108; FLJ34743; DKFZp686B1223; CEGF3
Homo sapiens	RefSeq	NM_174908.2	ILMN_12155	CCDC50	NM_174908.2	NM_174908.2		152137	33186926	NM_174908.2	CCDC50	NP_777568.1	ILMN_2302118	0000070603	A	1597	CTCCTGTGTTTGCATTCCTGGGATTTATCCTCAAGTGCATTTCTGACCAT	3	+	192592329-192592378	3q28d	Homo sapiens coiled-coil domain containing 50 (CCDC50), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18029035] [evidence IPI]	C3orf6; DFNA44; YMER	C3orf6; DFNA44; YMER
Homo sapiens	RefSeq	NM_138635.2	ILMN_29030	H2AFV	NM_138635.3	NM_138635.3		94239	149999597	NM_138635.3	H2AFV	NP_619541.1	ILMN_1706784	0003460193	I	581	GCTGAACCAAGGAACTGCCCGAATGTGCTGAACAAGGACATTTGCTTCTC	7	-	44869612-44869661	7p13c	Homo sapiens H2A histone family, member V (H2AFV), transcript variant 2, mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC1947; H2AV; MGC10831; FLJ26479; MGC10170	MGC1947; H2AV; MGC10831; FLJ26479; MGC10170
Homo sapiens	RefSeq	NR_030640.1	ILMN_388219	MIR942	NR_030640.1	NR_030640.1		100126331	262206261	NR_030640.1	MIR942		ILMN_3308063	0002510202	S	10	TATCTTCTCTGTTTTGGCCATGTGTGTACTCACAGCCCCTCACACATGGC				1p13.1a	Homo sapiens microRNA 942 (MIR942), microRNA.					
Homo sapiens	RefSeq	NM_031950.2	ILMN_16684	FGFBP2	NM_031950.2	NM_031950.2		83888	31543022	NM_031950.2	FGFBP2	NP_114156.1	ILMN_1761945	0000010504	S	717	GCGCCTTTCTCATCAGCTTCTTCCGAGGGTGACAGGTGAAAGACCCCTAC	4	-	15573160-15573178:15573179-15573209	4p15.32d	Homo sapiens fibroblast growth factor binding protein 2 (FGFBP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]	KSP37	KSP37
Homo sapiens	RefSeq	NM_178349.1	ILMN_23910	LCE1B	NM_178349.1	NM_178349.1		353132	30387655	NM_178349.1	LCE1B	NP_848126.1	ILMN_1736655	0000050725	S	880	TCCGTCTTCCTTCTCCTTCTGGGCCTGCCCATGTTGTTGAGAGGTCTTGG	1	+	151051950-151051999	1q21.3b	Homo sapiens late cornified envelope 1B (LCE1B), mRNA.		The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		LEP2; SPRL2A	LEP2; SPRL2A
Homo sapiens	RefSeq	NM_020400.4	ILMN_16181	LPAR5	NM_020400.4	NM_020400.4		57121	48675823	NM_020400.4	LPAR5	NP_065133.1	ILMN_2044453	0002260241	S	2672	GCTTGACCTCGTGGACTTCCTCAGAGGGTTGGTCCCTGGATCACACTTTG	12	-	6598385-6598434	12p13.31d	Homo sapiens lysophosphatidic acid receptor 5 (LPAR5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	LPA5; KPG_010; LPAR5; GPR93	GPR93; LPA5; KPG_010; LPAR5
Homo sapiens	RefSeq	XM_943009.1	ILMN_2518	SPANXB2	NM_145664.1	NM_145664.1		100133171	22027491	NM_145664.1	SPANXB2	NP_663697.1	ILMN_1680689	0007330280	S	107	GGCCAACAATCCAGTGTCCGCAGGCTGAAGAGGAGCGTCCCCTGTGAATC	X	+	140084862-140084911	Xq27.1d	Homo sapiens SPANX family, member B2 (SPANXB2), mRNA.				SPANX; SPANXB	
Homo sapiens	RefSeq	NM_001001827.1	ILMN_182519	OR2T35	NM_001001827.1	NM_001001827.1		403244	49226829	NM_001001827.1	OR2T35	NP_001001827.1	ILMN_2148122	0000110494	S	273	GACCATTTCCTTCCTGGGCTGTGCAGTTCAAATCTTCTACCTGACCCTGA	1	-	248802237-248802286	1q44f	Homo sapiens olfactory receptor, family 2, subfamily T, member 35 (OR2T35), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	XM_370567.4	ILMN_30820	KIAA1975	XM_370567.4	XM_370567.4		119385	89031533	XM_370567.4	KIAA1975	XP_370567.4	ILMN_1667263	0003370689	A	1925	CCTCATGCCAATAAAAAGAAACACCTAAAGAAGAAAAGCACCAACAACTT	10	+	88758716-88758765	10q23.2a-q23.2b	PREDICTED: Homo sapiens KIAA1975 protein similar to MRIP2, transcript variant 1 (KIAA1975), mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_138807.2	ILMN_9705	C3ORF31	NM_138807.2	NM_138807.2		132001	34147617	NM_138807.2	C3orf31	NP_620162.1	ILMN_1793724	0007000746	S	1080	GCTCATGATCCCGACTGTGGAGATGTGGTGCGACTAGGCCTGAAGAAGTC	3	-	11863027-11863076	3p25.2b	Homo sapiens chromosome 3 open reading frame 31 (C3orf31), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Loosely bound to one surface of the mitochondrial inner membrane, but not integrated into the hydrophobic region [goid 31314] [evidence ISS]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together [goid 30150] [evidence ISS]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]		MGC16471; DKFZp434E0519	DKFZp434E0519; MGC16471
Homo sapiens	RefSeq	XM_925783.1	ILMN_39864	LOC641697	XM_925783.1	XM_925783.1		641697	89041367	XM_925783.1	LOC641697	XP_930876.1	ILMN_1806215	0000380678	S	67	GTACATTTTCCCCACACTTGGAATCAGCCATTCCTCCAGGGAGTGCAGGT	17	-	31802193-31802242		PREDICTED: Homo sapiens similar to ribosomal protein S6 kinase, polypeptide 1 (LOC641697), mRNA.					
Homo sapiens	RefSeq	NM_032862.2	ILMN_16837	TIGD5	NM_032862.2	NM_032862.2		84948	23238250	NM_032862.2	TIGD5	NP_116251.2	ILMN_1705774	0000520639	S	2115	AGTCACATGCACTGGACGAGGGCCGAAACTCCTGTCTGCTATCGAGCCCT	8	+	144753478-144753527	8q24.3g	Homo sapiens tigger transposable element derived 5 (TIGD5), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ14926; MGC44883	FLJ14926; MGC44883
Homo sapiens	RefSeq	NM_017954.8	ILMN_20042	CADPS2	NM_017954.9	NM_017954.9		93664	148839293	NM_017954.9	CADPS2	NP_060424.9	ILMN_1684461	0007160102	A	4725	CCCCAGGTGTGGGGTAGCAAGTGTGCTTCCGTCAAGATACCATATTCTCC	7	-	122027166-122027215	7q31.32a-q31.32b	Homo sapiens Ca++-dependent secretion activator 2 (CADPS2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	KIAA1591; FLJ40851	FLJ40851
Homo sapiens	RefSeq	NM_017954.8	ILMN_20042	CADPS2	NM_017954.9	NM_017954.9		93664	148839293	NM_017954.9	CADPS2	NP_060424.9	ILMN_1801370	0000990494	I	3058	CGCCAACAGTCTTCCCAATGTAGCTCTTCCAAAAGTTCCAAGTCTGCCTC	7	-	122090819-122090859:122091428-122091436	7q31.32a-q31.32b	Homo sapiens Ca++-dependent secretion activator 2 (CADPS2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	KIAA1591; FLJ40851	FLJ40851
Homo sapiens	RefSeq	XM_939413.1	ILMN_33881	LOC650325	XM_939413.1	XM_939413.1		650325	89060830	XM_939413.1	LOC650325	XP_944506.1	ILMN_1680265	0004830114	S	121	GATTTTAACCAACCCTCATACATTACTGAACATGAGAAAATTCATACTGG					PREDICTED: Homo sapiens similar to zinc finger protein 681 (LOC650325), mRNA.					
Homo sapiens	RefSeq	XR_000541.1	ILMN_32796	ALOX12P2	XR_000541.1	XR_000541.1		245	89041163	XR_000541.1	ALOX12P2		ILMN_1735987	0005130427	A	1729	GTGGACTTACTGCCCAATCTCCACCAGGCACGTATGCAAAAGACCTTCAC	17	+	6743723-6743772	17p13.2a	PREDICTED: Homo sapiens arachidonate 12-lipoxygenase pseudogene 2 (ALOX12P2), misc RNA.		The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	Unigene	Hs.187816	ILMN_80931	HS.187816	Hs.187816		Hs.187816		27831201	BX101503			ILMN_1880341	0003830711	S	332	CCCACGTCTGACTCCAAGGGACCAGCTATTGACAGCTATTCACCATTTGG	X	+	3212354-3212403		BX101503 NCI_CGAP_Pr22 Homo sapiens cDNA clone IMAGp998I032985, mRNA sequence					
Homo sapiens	RefSeq	NM_018072.4	ILMN_7614	HEATR1	NM_018072.4	NM_018072.4		55127	73695474	NM_018072.4	HEATR1	NP_060542.4	ILMN_1787762	0003460242	S	6525	ACTGTCCTGGGAGAGCCACTCCAGAGCTATTTCTAAGACTTTCTGTGGTG	1	-	236714187-236714201:236714202-236714236	1q43a	Homo sapiens HEAT repeat containing 1 (HEATR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC72083; FLJ10359; RP11-385F5.3; BAP28	MGC72083; FLJ10359; RP11-385F5.3; BAP28
Homo sapiens	RefSeq	NM_000229.1	ILMN_29730	LCAT	NM_000229.1	NM_000229.1		3931	4557891	NM_000229.1	LCAT	NP_000220.1	ILMN_1815102	0001170112	S	1301	GACTGCCAGCCCAGAGCCCCCGCCTCCTGAATAAAGACCTTCCTTTGCTA	16	-	67973790-67973806:67973807-67973839	16q22.1b	Homo sapiens lecithin-cholesterol acyltransferase (LCAT), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10559507] [evidence IDA]; A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process [goid 34364] [pmid 3104518] [evidence IDA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline [goid 6656] [pmid 11966470] [evidence IDA]; The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus [goid 8202] [evidence IEA]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 14651331] [evidence NAS]; The chemical reactions and pathways resulting in the formation of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42158] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 4335615] [evidence IDA]; The directed movement of periperal cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism [goid 43691] [pmid 4335615] [evidence IDA]	Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine [goid 4607] [pmid 11966470] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11435418] [evidence IPI]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with apolipoprotein A-I [goid 34186] [pmid 1587806] [evidence IPI]		
Homo sapiens	RefSeq	XM_001721533.1	ILMN_351542	LOC100133301	XM_001721533.1	XM_001721533.1		100133301	169162877	XM_001721533.1	LOC100133301	XP_001721585.1	ILMN_3248462	0006510181	S	216	GACAGAATGTGTGGGACAAGAGCGACGGCTCATCCATTCAGGTTCCTCAG	1	+	16738363-16738412	1p36.13f	PREDICTED: Homo sapiens UPF0627 protein ENSP00000364708 (LOC100133301), mRNA.					
Homo sapiens	RefSeq	NM_001779.1	ILMN_29684	CD58	NM_001779.1	NM_001779.1		965	4502676	NM_001779.1	CD58	NP_001770.1	ILMN_2147517	0005900594	S	620	CCTGTATCCCAAGCAGCGGTCATTCAAGACACAGATATGCACTTATACCC	1	-	116866096-116866128:116880110-116880126	1p13.1b	Homo sapiens CD58 molecule (CD58), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7544493] [evidence NAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 7544493] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7544493] [evidence IPI]	LFA3; LFA-3	LFA3; LFA-3
Homo sapiens	RefSeq	NM_001779.1	ILMN_29684	CD58	NM_001779.1	NM_001779.1		965	4502676	NM_001779.1	CD58	NP_001770.1	ILMN_1785268	0003610035	S	367	GTGCTTGAGTCTCTTCCATCTCCCACACTAACTTGTGCATTGACTAATGG	1	-	116880330-116880373:116888456-116888461	1p13.1b	Homo sapiens CD58 molecule (CD58), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7544493] [evidence NAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 7544493] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7544493] [evidence IPI]	LFA3; LFA-3	LFA3; LFA-3
Homo sapiens	RefSeq	NM_016438.2	ILMN_8028	HIGD1B	NM_016438.2	NM_016438.2		51751	21314672	NM_016438.2	HIGD1B	NP_057522.1	ILMN_1675936	0007040088	S	402	TCCACCAAGATGTCCATACACCTGATTCACACCCGAGTGGCAGCGCAGGC	17	+	40282207-40282256	17q21.31d	Homo sapiens HIG1 hypoxia inducible domain family, member 1B (HIGD1B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			CLST11240; CLST11240-15	CLST11240; CLST11240-15
Homo sapiens	RefSeq	XM_930475.1	ILMN_137114	LOC653574	XM_930475.1	XM_930475.1		653574	88998598	XM_930475.1	LOC653574	XP_935568.1	ILMN_1716655	0005080286	A	181	GTCTTTTACCTTCCTACTTACTCAGTAAAGGACCAAACTCTTACCCAGGA	6	+	168112518-168112547:168112643-168112662		PREDICTED: Homo sapiens similar to Afadin (Af-6 protein), transcript variant 1 (LOC653574), mRNA.					
Homo sapiens	RefSeq	XR_037331.1	ILMN_344279	LOC100128016	XR_037331.1	XR_037331.1		100128016	169211332	XR_037331.1	LOC100128016		ILMN_3187254	0001170025	A	2246	GGACTGGGGAGTGCAGGGCTCTGTCAGATTCAGTGACAGCTCCATCTCCA				17q21.31b	PREDICTED: Homo sapiens misc_RNA (LOC100128016), miscRNA.					
Homo sapiens	RefSeq	NM_032195.1	ILMN_8462	SON	NM_032195.1	NM_032195.1		6651	21040313	NM_032195.1	SON	NP_115571.1	ILMN_2236800	0003520041	I	7035	GGTCATTGTAGGTTGATGTGAGCATCTTGGGTACATAGCCCATTGCCCTT	21	+	33854381-33854430	21q22.11c	Homo sapiens SON DNA binding protein (SON), transcript variant b, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10509013] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8031013] [evidence TAS]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914
Homo sapiens	RefSeq	NM_032195.1	ILMN_8462	SON	NM_032195.1	NM_032195.1		6651	21040313	NM_032195.1	SON	NP_115571.1	ILMN_1663090	0001110017	I	7184	GTGTTTAACCTAATGCTCAGCCTTGGTACTCCATTCCCTTCTCCTTCCCC	21	+	33854530-33854579	21q22.11c	Homo sapiens SON DNA binding protein (SON), transcript variant b, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10509013] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8031013] [evidence TAS]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914	FLJ21099; SON3; KIAA1019; BASS1; NREBP; C21orf50; DBP-5; FLJ33914
Homo sapiens	RefSeq	XR_017443.2	ILMN_165378	LOC387924	XR_017443.2	XR_017443.2		387924	169205938	XR_017443.2	LOC387924		ILMN_3290681	0007150064	M	1178	GCAGCCATCAGCATCAACGGCCAACAGAGCCATGAGCAGACAGACCGAGT	13	-	48682917-48682966	13q14.2c	PREDICTED: Homo sapiens misc_RNA (LOC387924), miscRNA.					
Homo sapiens	RefSeq	NM_006836.1	ILMN_26435	GCN1L1	NM_006836.1	NM_006836.1		10985	54607052	NM_006836.1	GCN1L1	NP_006827.1	ILMN_1734312	0006270450	S	8495	CCCTGTCAGATGAAAATGATTCACAGCTCTGGCAGTTCCCAAGTCTGGGG	12	-	120565137-120565186	12q24.23c-q24.31a	Homo sapiens GCN1 general control of amino-acid synthesis 1-like 1 (yeast) (GCN1L1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9234705] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 9234705] [evidence NAS]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Functions during translation by binding nucleic acids during polypeptide synthesis at the ribosome [goid 8135] [pmid 9234705] [evidence NAS]	GCN1; GCN1L; KIAA0219	GCN1; GCN1L; KIAA0219
Homo sapiens	RefSeq	XM_935791.1	ILMN_182436	C7ORF70	NM_001037163.1	NM_001037163.1		84792	81174548	NM_001037163.1	C7orf70	NP_001032240.1	ILMN_1717219	0007400671	A	1754	CCCCTTTCCTTCCACTTGAAATGCAATTTAGACAGAGGCCCTGTGGTGAA	7	-	6369450-6369499	7p22.1b	Homo sapiens chromosome 7 open reading frame 70 (C7orf70), mRNA.					
Homo sapiens	RefSeq	NM_001037163.1	ILMN_182436	C7ORF70	NM_001037163.1	NM_001037163.1		84792	81174548	NM_001037163.1	C7orf70	NP_001032240.1	ILMN_2116811	0007100687	S	1840	CTCAAACTCAGAACCCTAGCAGTGTTACCTTAAACAAAAATGAGCTCGAG	7	-	6369364-6369413	7p22.1b	Homo sapiens chromosome 7 open reading frame 70 (C7orf70), mRNA.					
Homo sapiens	RefSeq	NM_152261.1	ILMN_11109	C12ORF23	NM_152261.1	NM_152261.1		90488	22748614	NM_152261.1	C12orf23	NP_689474.1	ILMN_1804611	0003290379	S	2971	GGGTATTTGGCACAATGAGGATAAACTTATGTGACCCACTTGAATGGCTG	12	+	105891706-105891755	12q23.3c	Homo sapiens chromosome 12 open reading frame 23 (C12orf23), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ13959; MGC17943; FLJ11721	FLJ13959; MGC17943; FLJ11721
Homo sapiens	RefSeq	NM_000950.1	ILMN_9223	PRRG1	NM_000950.1	NM_000950.1		5638	4506134	NM_000950.1	PRRG1	NP_000941.1	ILMN_1781791	0007150673	S	4122	CAGTAGTTGTGTCTGGAATCCTAGAATTGGCACTTTCTGCCTCCTTGCTC	X	+	37201128-37201177	Xp21.1a	Homo sapiens proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9256434] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PRGP1	PRGP1
Homo sapiens	RefSeq	NM_001006114.1	ILMN_22474	C21ORF57	NM_001006114.1	NM_001006114.1		54059	54607073	NM_001006114.1	C21orf57	NP_001006114.1	ILMN_1765328	0007210722	I	1038	GACCATGGGGTGTCAACGATTTTTGTCCCCTGAGTCCGCCTCTGCGTGGA	21	+	46536396-46536445	21q22.3f	Homo sapiens chromosome 21 open reading frame 57 (C21orf57), transcript variant 2, mRNA.			Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ46907	FLJ46907
Homo sapiens	RefSeq	NM_173501.1	ILMN_138893	C16ORF52	NM_173501.1	NM_173501.1		146174	27735108	NM_173501.1	C16orf52	NP_775772.1	ILMN_1717324	0000060243	S	884	GAATTTCCCCATGGACTCCAGATCCTTTACTACTGAACTCACAGGGCTGT	16	+	22005881-22005930		Homo sapiens chromosome 16 open reading frame 52 (C16orf52), mRNA.					
Homo sapiens	RefSeq	NM_001004320.1	ILMN_4235	TMEM195	NM_001004320.1	NM_001004320.1		392636	51972211	NM_001004320.1	TMEM195	NP_001004320.1	ILMN_1812678	0000070279	S	2364	TCTCTAATATGCTTGGTCAATTTGTTTTGGCAGACTGGGCAGCATGCAGC	7	-	15396832-15396881	7p21.1c	Homo sapiens transmembrane protein 195 (TMEM195), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC131748; FLJ16237	MGC131748; FLJ16237
Homo sapiens	RefSeq	NM_006744.3	ILMN_19033	RBP4	NM_006744.3	NM_006744.3		5950	55743121	NM_006744.3	RBP4	NP_006735.2	ILMN_1814719	0004610424	S	571	CCCCCAGAAGCGCAGAAGATTGTAAGGCAGCGGCAGGAGGAGCTGTGCCT	10	-	95353611-95353660	10q23.33b	Homo sapiens retinol binding protein 4, plasma (RBP4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 17003346] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 5132677] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight [goid 1654] [pmid 10232633] [evidence IMP]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [pmid 18466349] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; Protection of epithelial surfaces of the gastrointestinal tract from proteolytic and caustic digestive agents [goid 30277] [pmid 10944490] [evidence IDA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [pmid 16034410] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 571335] [evidence IDA]; The directed movement of retinol into, out of, within or between cells. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A [goid 34633] [pmid 571335] [evidence IC ]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [pmid 10232633] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [pmid 17003346] [evidence IDA]; Morphogenesis, during the embryonic phase, of a tissue or tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 48562] [evidence ISS]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence ISS]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence ISS]; The process by which the anatomical structures of female genitalia are generated and organized. Morphogenesis pertains to the creation of form [goid 48807] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51024] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell proliferation [goid 60044] [evidence ISS]; The process by which the anatomical structure of the retina is generated and organized in a camera-type eye during the embryonic life stage . Morphogenesis pertains to the creation of form [goid 60059] [evidence ISS]; The reproductive developmental process whose specific outcome is the progression of the uterus over time, from its formation to the mature structure [goid 60065] [evidence ISS]; The reproductive developmental process whose specific outcome is the progression of the vagina over time, from its formation to the mature structure [goid 60068] [evidence ISS]; The process whose specific outcome is the progression of the urinary bladder over time, from its formation to the mature structure. The urinary bladder is an elastic, muscular sac situated in the anterior part of the pelvic cavity in which urine collects before excretion [goid 60157] [evidence ISS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity [goid 5501] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]; Enables the directed movement of retinol into, out of, within or between cells. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A [goid 34632] [pmid 571335] [evidence IC ]		
Homo sapiens	RefSeq	NM_016068.1	ILMN_13135	FIS1	NM_016068.2	NM_016068.2		51024	151108472	NM_016068.2	FIS1	NP_057152.2	ILMN_1658351	0006420242	S	518	ACTTGCTGTGTCCAAGTCCAAATCCTGAAGGAGACGCGGGAGCCCACGGA	7	-	100883064-100883086:100883087-100883113	7q22.1d	Homo sapiens fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) (FIS1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 14561759] [evidence ISS]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [pmid 16107562] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the mitochondrial outer membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 31307] [pmid 14996942] [evidence IDA]	The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments [goid 266] [pmid 16118244] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 16118244] [evidence IDA]; The division of a mature peroxisome within a cell to form two or more separate peroxisome compartments [goid 16559] [pmid 16107562] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12861026] [evidence IPI]	TTC11; CGI-135	TTC11; CGI-135
Homo sapiens	RefSeq	NM_001080461.1	ILMN_165656	UNCX	NM_001080461.1	NM_001080461.1		340260	122937320	NM_001080461.1	UNCX	NP_001073930.1	ILMN_2139167	0003830609	S	361	GAGAAGGCGTTCAACGAGAGCCACTATCCCGACGTGTTCATGCGCGAGGC	7	+	1239768-1239817	7p22.3b	Homo sapiens UNC homeobox (UNCX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	UNCX4.1	UNCX4.1
Homo sapiens	RefSeq	NM_001080461.1	ILMN_165656	UNCX	NM_001080461.1	NM_001080461.1		340260	122937320	NM_001080461.1	UNCX	NP_001073930.1	ILMN_3251747	0004060253	S	976	CTGCCCAAGGCCAGCCCATTCAGCGTGGAGAGCCTCCTGTCCGACTCGCC	7	+	1242519-1242568	7p22.3b	Homo sapiens UNC homeobox (UNCX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	UNCX4.1	UNCX4.1
Homo sapiens	RefSeq	NM_181780.2	ILMN_5713	BTLA	NM_181780.2	NM_181780.2		151888	54607121	NM_181780.2	BTLA	NP_861445.2	ILMN_2099528	0002810064	S	1018	GCATCCATATGTGTGAGGAGTTAAGTCTGTTTCTGACTCCAACAGGGACC	3	-	113667618-113667644:113667645-113667667	3q13.2a	Homo sapiens B and T lymphocyte associated (BTLA), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD272; BTLA1; MGC129743; FLJ16065	CD272; BTLA1; MGC129743; FLJ16065
Homo sapiens	RefSeq	NM_005321.2	ILMN_9520	HIST1H1E	NM_005321.2	NM_005321.2		3008	20544164	NM_005321.2	HIST1H1E	NP_005312.1	ILMN_1746435	0001030017	S	639	AGTTAAACCCAAGGCGGCTAAACCAAAGACCGCCAAGCCCAAGGCAGCCA	6	+	26157197-26157246	6p22.1d	Homo sapiens histone cluster 1, H1e (HIST1H1E), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17540172] [evidence IPI]	dJ221C16.5; H1.4; H1F4; MGC116819	H1.4; dJ221C16.5; H1F4; MGC116819
Homo sapiens	RefSeq	NM_016170.3	ILMN_25395	TLX2	NM_016170.3	NM_016170.3		3196	34013511	NM_016170.3	TLX2	NP_057254.1	ILMN_1793016	0006100370	I	336	ATGCTGGGTCCACACAACCTCCCACACCACGAGCCAATCAGCTTCGGCAT	2	+	74595454-74595503	2p13.1b	Homo sapiens T-cell leukemia homeobox 2 (TLX2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that stops, prevents or reduces the frequency, rate or extent of dendrite morphogenesis [goid 50774] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX11L1; NCX; Enx	HOX11L1; NCX; Enx
Homo sapiens	RefSeq	NM_016170.3	ILMN_25395	TLX2	NM_016170.3	NM_016170.3		3196	34013511	NM_016170.3	TLX2	NP_057254.1	ILMN_1728062	0005050195	A	1579	CCGGCTGGGTCTGTACCAAAGGTGTGAAGGAAAGAAGACACCGACCACGG	2	+	74597225-74597274	2p13.1b	Homo sapiens T-cell leukemia homeobox 2 (TLX2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that stops, prevents or reduces the frequency, rate or extent of dendrite morphogenesis [goid 50774] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX11L1; NCX; Enx	HOX11L1; NCX; Enx
Homo sapiens	RefSeq	NM_012090.3	ILMN_3286	MACF1	NM_012090.3	NM_012090.3		23499	33188444	NM_012090.3	MACF1	NP_036222.3	ILMN_1737935	0004040278	I	3770	GATCTCTCAGCTCTGGAGGCCCATTGGTCGACATTACGGCACTGGCTTAG	1	+	39549965-39550014	1p34.3a-p34.2d	Homo sapiens microtubule-actin crosslinking factor 1 (MACF1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10559237] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10529403] [evidence NAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence NAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 10529403] [evidence NAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 10559237] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0465; FLJ45612; ACF7; ABP620; KIAA1251; OFC4; MACF; FLJ46776	KIAA0465; FLJ45612; ACF7; ABP620; KIAA1251; OFC4; MACF; FLJ46776
Homo sapiens	RefSeq	NM_012090.3	ILMN_3286	MACF1	NM_012090.3	NM_012090.3		23499	33188444	NM_012090.3	MACF1	NP_036222.3	ILMN_2301624	0006370739	A	17221	CAGCCTAGACACCAGTAACTCTTGTGTTCACCAGGACCCAGACCCTTGGC	1	+	39724028-39724053:39724054-39724077	1p34.3a-p34.2d	Homo sapiens microtubule-actin crosslinking factor 1 (MACF1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10559237] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10529403] [evidence NAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]	Catalysis of the hydrolysis of any O-glycosyl bond [goid 4553] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence NAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 10529403] [evidence NAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 10559237] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0465; FLJ45612; ACF7; ABP620; KIAA1251; OFC4; MACF; FLJ46776	KIAA0465; FLJ45612; ACF7; ABP620; KIAA1251; OFC4; MACF; FLJ46776
Homo sapiens	RefSeq	NM_004646.1	ILMN_4764	NPHS1	NM_004646.1	NM_004646.1		4868	4758821	NM_004646.1	NPHS1	NP_004637.1	ILMN_1681116	0002140543	S	3757	GCAGGAATTTACACTCCACTGGTCTCTCTCATTACAGCCTGGGCCGAGCT	19	-	41009175-41009224	19q13.12a	Homo sapiens nephrosis 1, congenital, Finnish type (nephrin) (NPHS1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9660941] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9660941] [evidence TAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 9660941] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16525419] [evidence IPI]	CNF; NPHN	CNF; NPHN
Homo sapiens	RefSeq	NM_003038.2	ILMN_12585	SLC1A4	NM_003038.2	NM_003038.2		6509	21314631	NM_003038.2	SLC1A4	NP_003029.2	ILMN_1656904	0006350392	S	4244	TTCCGAGAGTGTGCAGGTGGCCCTTCCCCTTGGAGGCGAGAAGAGAGAAT	2	+	65104245-65104294	2p14c	Homo sapiens solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (SLC1A4), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence ISS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8910405] [evidence IC ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of dicarboxylic acids into, out of, within or between cells [goid 6835] [evidence IEA]; The directed movement of L-alanine, the levorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells [goid 15808] [pmid 8340364] [evidence IDA]; The directed movement of L-alanine, the levorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells [goid 15808] [pmid 8910405] [evidence IDA]; The directed movement of L-alanine, the levorotatory isomer of 2-aminopropanoic acid, into, out of, within or between cells [goid 15808] [pmid 8101838] [evidence IDA]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [pmid 8340364] [evidence IDA]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [pmid 8910405] [evidence IDA]; The directed movement of L-cystine (also known as dicysteine) into, out of, within or between cells [goid 15811] [pmid 8101838] [evidence IDA]; The directed movement of proline, pyrrolidine-2-carboxylic acid, into, out of, within or between cells [goid 15824] [pmid 14502423] [evidence IDA]; The directed movement of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells [goid 15825] [pmid 8340364] [evidence IDA]; The directed movement of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells [goid 15825] [pmid 8101838] [evidence IDA]; The directed movement of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid, into, out of, within or between cells [goid 15825] [pmid 8910405] [evidence IDA]; The directed movement of threonine, (2R*,3S*)-2-amino-3-hydroxybutanoic acid, into, out of, within or between cells [goid 15826] [pmid 8340364] [evidence IDA]; The directed movement of hydroxyproline into, out of, within or between cells [goid 34589] [pmid 14502423] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [pmid 16897601] [evidence NAS]; The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory [goid 50890] [pmid 16897601] [evidence IMP]	Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [pmid 8910405] [evidence IDA]; Catalysis of the transfer of L-alanine from one side of a membrane to the other. L-alanine, the levorotatory isomer of 2-aminopropanoic acid [goid 15180] [pmid 8340364] [evidence IDA]; Catalysis of the transfer of L-alanine from one side of a membrane to the other. L-alanine, the levorotatory isomer of 2-aminopropanoic acid [goid 15180] [pmid 8910405] [evidence IDA]; Catalysis of the transfer of L-alanine from one side of a membrane to the other. L-alanine, the levorotatory isomer of 2-aminopropanoic acid [goid 15180] [pmid 8101838] [evidence IDA]; Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [pmid 8340364] [evidence IDA]; Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [pmid 8910405] [evidence IDA]; Catalysis of the transfer of L-cystine from one side of a membrane to the other [goid 15184] [pmid 8101838] [evidence IDA]; Catalysis of the transfer of L-proline from one side of a membrane to the other. L-proline is pyrrolidine-2-carboxylic acid [goid 15193] [pmid 14502423] [evidence IDA]; Catalysis of the transfer of L-serine from one side of a membrane to the other. L-serine is the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 15194] [pmid 8910405] [evidence IDA]; Catalysis of the transfer of L-serine from one side of a membrane to the other. L-serine is the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 15194] [pmid 8101838] [evidence IDA]; Catalysis of the transfer of L-serine from one side of a membrane to the other. L-serine is the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 15194] [pmid 8340364] [evidence IDA]; Catalysis of the transfer of L-threonine from one side of a membrane to the other. L-threonine is (2R*,3S*)-2-amino-3-hydroxybutanoic acid [goid 15195] [pmid 8340364] [evidence IDA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in) [goid 17153] [evidence IEA]; Catalysis of the transfer of L-hydroxyproline from one side of a membrane to the other [goid 34590] [pmid 14502423] [evidence IDA]	SATT; ASCT1	SATT; ASCT1
Homo sapiens	RefSeq	NM_004152.2	ILMN_15269	OAZ1	NM_004152.2	NM_004152.2		4946	34486089	NM_004152.2	OAZ1	NP_004143.1	ILMN_1773080	0007100239	S	819	GTGGGTAGGAACCGTAGACTCGCTCATCTCGCCTGGGTTTGTCCGCATGT	19	+	2224160-2224209	19p13.3g	Homo sapiens ornithine decarboxylase antizyme 1 (OAZ1), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups [goid 6596] [pmid 7813017] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The stopping, prevention or reduction of the activity of the enzyme ornithine decarboxylase [goid 8073] [pmid 7813017] [evidence TAS]	OAZ; MGC138338; AZI	OAZ; MGC138338; AZI
Homo sapiens	RefSeq	NM_001024070.1	ILMN_23648	GCH1	NM_001024070.1	NM_001024070.1		2643	66932969	NM_001024070.1	GCH1	NP_001019241.1	ILMN_2335813	0001010360	A	456	GCCTCGGCCATGCAGTTCTTCACCAAGGGCTACCAGGAGACCATCTCAGA	14	-	55332153-55332154:55369039-55369086	14q22.2b-q22.3a	Homo sapiens GTP cyclohydrolase 1 (GCH1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16778797] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10907721] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 3318829] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2463916] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [pmid 3318829] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11087823] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of GTP, guanosine triphosphate [goid 6184] [pmid 2463916] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 17101830] [evidence IMP]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 9445252] [evidence IDA]; The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [pmid 7678411] [evidence IDA]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [pmid 9445252] [evidence NAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 17717598] [evidence IMP]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [pmid 7678411] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [pmid 9445252] [evidence IDA]; A change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a of lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria [goid 32496] [pmid 15604419] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 7678411] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 12607127] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 9445252] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon [goid 34341] [pmid 15604419] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus [goid 34612] [pmid 9445252] [evidence IDA]; The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline [goid 42416] [pmid 16338639] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence ISS]; Any process by which an organism voluntarily modulates its posture, the alignment of its anatomical parts [goid 50884] [pmid 7874165] [evidence IMP]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 17717598] [evidence IMP]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 12176133] [evidence IDA]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 15721862] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51260] [pmid 11087823] [evidence IDA]	Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 3753653] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 11284739] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 8068008] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 16778797] [evidence IDA]; Catalysis of the reaction: GTP + 2 H2O = formate + 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)-dihydropteridine triphosphate [goid 3934] [pmid 8068008] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9092499] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16696853] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 3753653] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 14717702] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11087823] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 14717702] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 1669853] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DYT5; GTP-CH-1; GTPCH1; GCH	DYT5; GTP-CH-1; GTPCH1; GCH
Homo sapiens	RefSeq	NM_182623.1	ILMN_171255	C1ORF117	NM_182623.1	NM_182623.1		348487	32699057	NM_182623.1	C1orf117	NP_872429.1	ILMN_2354696	0001770270	A	1090	CAGGGCATCCCTTGACCCCTCGGGTAGGCACAGGGTAGGTGCAGCAGGGA	1	-	16257380-16257429	1p36.13f	Homo sapiens chromosome 1 open reading frame 117 (C1orf117), mRNA.				FLJ36766; RP11-5P18.9	FLJ36766; RP11-5P18.9
Homo sapiens	RefSeq	NM_001080439.1	ILMN_183027	HSF5	NM_001080439.1	NM_001080439.1		124535	122937276	NM_001080439.1	HSF5	NP_001073908.1	ILMN_2346836	0004220343	A	3866	ACAGCAGACCAAGGAGCTGGATCTCCTGCTATCCTTACACGCCTTGTATC	17	-	56497720-56497769	17q22d	Homo sapiens heat shock transcription factor family member 5 (HSF5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ40311; MGC134827	FLJ40311; MGC134827
Homo sapiens	RefSeq	NM_001080439.1	ILMN_183027	HSF5	NM_001080439.1	NM_001080439.1		124535	122937276	NM_001080439.1	HSF5	NP_001073908.1	ILMN_2346841	0000110176	A	3614	GTCAGAGTATGTGAAGAGGAGACCCAATTTCCAAATGAAGGAACTTTGCT	17	-	56497972-56498021	17q22d	Homo sapiens heat shock transcription factor family member 5 (HSF5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ40311; MGC134827	FLJ40311; MGC134827
Homo sapiens	RefSeq	NR_024158.1	ILMN_364691	LOC25845	NR_024158.1	NR_024158.1		25845	205830458	NR_024158.1	LOC25845		ILMN_3239925	0001260064	S	1649	TCCAGCTGTGGGTTGGCAGTGTCCAGACAGGGAGGGCCCATCACCGAAAT	5	-	470669-470718	5p15.33e	Homo sapiens hypothetical LOC25845 (LOC25845), non-coding RNA.					
Homo sapiens	RefSeq	NM_016353.2	ILMN_26297	ZDHHC2	NM_016353.3	NM_016353.3		51201	142365263	NM_016353.3	ZDHHC2	NP_057437.1	ILMN_1769783	0002470243	S	3115	GGACAGGATTCGATTAAGTATTCCCTCTTGTCAAACTGGAAGCTAGGGGA	8	+	17123910-17123959	8p22b	Homo sapiens zinc finger, DHHC-type containing 2 (ZDHHC2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The covalent or non-covalent attachment of a palmitoyl moiety to a protein [goid 18345] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule [goid 16409] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF372	ZNF372
Homo sapiens	Unigene	Hs.444939	ILMN_92888	HS.444939	Hs.444939		Hs.444939		10862503	AV744922			ILMN_1898454	0006510739	S	85	GGGGTCAGGAACTAGATTTCAGTCCTGCTTTCACCGTTTACTGTGCCTTG	1	+	26059026-26059075		AV744922 CB Homo sapiens cDNA clone CBMAJE08 5, mRNA sequence					
Homo sapiens	RefSeq	XM_936950.1	ILMN_40269	LOC647890	XM_936950.1	XM_936950.1		647890	89039173	XM_936950.1	LOC647890	XP_942043.1	ILMN_1661985	0004220369	S	67	GATCACAGATTGAACCCCAACCCTGGCCACACACTGAATCCCGACCCTGG					PREDICTED: Homo sapiens similar to Small proline-rich protein 3 (Cornifin beta) (LOC647890), mRNA.					
Homo sapiens	RefSeq	NM_000277.1	ILMN_168715	PAH	NM_000277.1	NM_000277.1		5053	4557818	NM_000277.1	PAH	NP_000268.1	ILMN_2218104	0006580110	S	2540	GCAGCAGATGTTGACTAAAGGCTTGGTTGGTAGATATTCAGGAAATGTTC	12	-	103232194-103232243	12q23.2a	Homo sapiens phenylalanine hydroxylase (PAH), mRNA.		The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid [goid 6559] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [pmid 3856322] [evidence TAS]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: L-phenylalanine + tetrahydrobiopterin + O2 = L-tyrosine + 4-alpha-hydroxytetrahydrobiopterin [goid 4505] [pmid 3856322] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PKU; PKU1	PKU; PKU1
Homo sapiens	RefSeq	NM_002801.2	ILMN_29653	PSMB10	NM_002801.2	NM_002801.2		5699	23110923	NM_002801.2	PSMB10	NP_002792.1	ILMN_1683026	0002000445	S	876	ACCCTGGAGCTAGTGGAGGAAACTGTGCAGGCTATGGAGGTGGAGTAAGC	16	-	67968460-67968462:67968463-67968509	16q22.1b	Homo sapiens proteasome (prosome, macropain) subunit, beta type, 10 (PSMB10), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; An immune response mediated through a body fluid [goid 6959] [pmid 8666937] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	beta2i; MGC1665; LMP10; MECL1	beta2i; MECL1; MGC1665; LMP10
Homo sapiens	RefSeq	XM_927058.1	ILMN_45591	LOC643767	XM_927058.1	XM_927058.1		643767	89059562	XM_927058.1	LOC643767	XP_932151.1	ILMN_1673668	0002640474	S	1	ATGGTAATCCTGGATGCTGTCATTGAAGCCAAATCGTTGCCCCAGGGCAC	X	-	48886921-48886970		PREDICTED: Homo sapiens hypothetical protein LOC643767 (LOC643767), mRNA.					
Homo sapiens	RefSeq	NM_080676.4	ILMN_24304	C20ORF133	NM_080676.4	NM_080676.4		140733	74325772	NM_080676.4	C20orf133	NP_542407.1	ILMN_1698298	0002600341	I	401	CAGCTTGGGCTCTAGGAAAAGAGCCTTTTATCCCACCTTGTCTTCCAGTC	20	+	13980664-13980666:13981745-13981791	20p12.1d-p12.1b	Homo sapiens chromosome 20 open reading frame 133 (C20orf133), transcript variant 3, mRNA.				RP11-189J1.1; dJ631M13.5	RP11-189J1.1; dJ631M13.5
Homo sapiens	RefSeq	XM_946119.1	ILMN_138830	EHMT1	XM_946119.1	XM_946119.1		79813	89030726	XM_946119.1	EHMT1	XP_951212.1	ILMN_1706418	0000160546	I	2482	TTCCCGAACACAGCCAGGAACCACGCCAAGAGGAAGATGCTCCAGCACAG				9q34.3f-q34.3g	PREDICTED: Homo sapiens euchromatic histone-lysine N-methyltransferase 1, transcript variant 4 (EHMT1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12004135] [evidence IC ]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12004135] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [pmid 12004135] [evidence IDA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [pmid 12004135] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [pmid 12004135] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_928438.1	ILMN_40080	LOC645393	XM_928438.1	XM_928438.1		645393	89037341	XM_928438.1	LOC645393	XP_933531.1	ILMN_1763044	0004120239	S	218	CCTTGTTGGGAAGGGACTTGCTTAGCAAGCTGAGAGCTGCTCTGTCTTTG	14	+	51286372-51286421		PREDICTED: Homo sapiens hypothetical protein LOC645393 (LOC645393), mRNA.					
Homo sapiens	RefSeq	XM_001726548.1	ILMN_344171	LOC100134668	XM_001726548.1	XM_001726548.1		100134668	169170650	XM_001726548.1	LOC100134668	XP_001726600.1	ILMN_3242946	0000070647	S	186	TTCAATTGGTGAATATTGATGGAAGGAGGAGGCTTCGAATTCCTCTGGCT	7	+	134228949-134228998		PREDICTED: Homo sapiens hypothetical LOC100134668 (LOC100134668), mRNA.					
Homo sapiens	Unigene	Hs.546710	ILMN_109413	HS.546710	Hs.546710		Hs.546710		34526214	AK129633			ILMN_1908918	0002030100	S	2179	CCTTGATGGACATGCCAGGAGGAGCAACGAGGGGAGACAAGGTGCCCAGG	6	-	166227483-166227532		Homo sapiens cDNA FLJ26122 fis, clone SYN00634					
Homo sapiens	RefSeq	NM_004991.1	ILMN_9694	MDS1	NM_004991.1	NM_004991.1		4197	4826827	NM_004991.1	MDS1	NP_004982.1	ILMN_1784582	0002640689	S	1064	TTGAAAGCAGTTTTGTAAAGGGCAAGGAGGTGGGGGCCGCAGGGTTGGGG	3	-	170349752-170349801	3q26.2b	Homo sapiens myelodysplasia syndrome 1 (MDS1), mRNA.			The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8643684] [evidence TAS]	PRDM3; MDS1-EVI1	PRDM3; MDS1-EVI1
Homo sapiens	RefSeq	XM_935537.1	ILMN_46837	LOC641724	XM_935537.1	XM_935537.1		641724	89027421	XM_935537.1	LOC641724	XP_940630.1	ILMN_1722929	0005270376	S	13	CACCGCGCCCGGCCTTGTTTTAAGCATTTGGGGATCAATTGCAGGGACCT					PREDICTED: Homo sapiens similar to stromal antigen 3 (LOC641724), mRNA.					
Homo sapiens	RefSeq	NM_002812.3	ILMN_164102	PSMD8	NM_002812.3	NM_002812.3		5714	39812361	NM_002812.3	PSMD8	NP_002803.1	ILMN_1733256	0000650369	S	1362	CATGGCCCCAGGTAGGGGGACTGTTCTAGCCAGCTGTGGACACATAGGAA	19	+	43566158-43566207	19q13.2a	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 (PSMD8), mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [pmid 7621825] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	Nin1p; HIP6; S14; HYPF; MGC1660; p31	Nin1p; S14; HYPF; HIP6; MGC1660; p31
Homo sapiens	RefSeq	XM_001720619.1	ILMN_347030	LOC100132323	XM_001720619.1	XM_001720619.1		100132323	169176749	XM_001720619.1	LOC100132323	XP_001720671.1	ILMN_3245194	0003930670	S	1267	GAACTGCTTGAACCCTGGAGGCGGAGGTTACAGTTATCCGAGGTTGTGTC	9	-	139406146-139406195	9q34.3f	PREDICTED: Homo sapiens hypothetical protein LOC100132323 (LOC100132323), mRNA.					
Homo sapiens	RefSeq	NM_003136.2	ILMN_6959	SRP54	NM_003136.2	NM_003136.2		6729	20149548	NM_003136.2	SRP54	NP_003127.1	ILMN_2312275	0006860553	A	1678	GGCAGTTTCAACAGGGTGCTGCTGGCAACATGAAAGGCATGATGGGATTC	14	+	34568048-34568097	14q13.2a	Homo sapiens signal recognition particle 54kDa (SRP54), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10618370] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10618370] [evidence IDA]; A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA [goid 5786] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane [goid 6614] [pmid 9511762] [evidence IC ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14729963] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with 7S RNA, the RNA component of the signal recognition particle (SRP) [goid 8312] [pmid 9511762] [evidence IDA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any complex of RNA and protein [goid 43021] [pmid 9511762] [evidence IDA]		
Homo sapiens	RefSeq	XR_039335.1	ILMN_345448	LOC100129375	XR_039335.1	XR_039335.1		100129375	169163064	XR_039335.1	LOC100129375		ILMN_3265021	0005670086	M	1221	AAGGAGGGGCTAGAAAAGAACTCAAAGGGCTGCCATGTTGTGGAACTCCC	2	-	138886299-138886348	2q22.1b	PREDICTED: Homo sapiens misc_RNA (LOC100129375), miscRNA.					
Homo sapiens	Unigene	Hs.576530	ILMN_128711	HS.576530	Hs.576530		Hs.576530		83159271	DB083009			ILMN_1883159	0001990209	S	198	CGGAGTACGTCTACAGAGGATTCAGAGGGGACCAGGCCTTTCGCGATGAA	1	+	236177111-236177155:236230341-236230345		DB083009 TESTI4 Homo sapiens cDNA clone TESTI4029502 5, mRNA sequence					
Homo sapiens	RefSeq	NR_003069.1	ILMN_168726	SNORD88C	NR_003069.1	NR_003069.1		692204	96974949	NR_003069.1	SNORD88C		ILMN_3237615	0006620047	S	36	TCACCCCTGAGGACACAGTGCACCCCAGGACCTTTGACACCTGGGGGTCT	19	-	55997405-55997454	19q13.33c	Homo sapiens small nucleolar RNA, C/D box 88C (SNORD88C), small nucleolar RNA.				HBII-180C	HBII-180C
Homo sapiens	RefSeq	XM_497540.2	ILMN_39910	LOC441792	XM_497540.2	XM_497540.2		441792	89041369	XM_497540.2	LOC441792	XP_497540.2	ILMN_1689036	0003170528	S	3	GAAGGCAGAGATCCAGGTGATGCACCTACAAGCCAAAGCAGTCTGTGAGA	17	+	31804318-31804354:31816166-31816178	17q12b	PREDICTED: Homo sapiens similar to Nitric oxide synthase, inducible (NOS type II) (Inducible NOS) (iNOS) (Hepatocyte NOS) (HEP-NOS) (LOC441792), mRNA.					
Homo sapiens	RefSeq	Hs.570216	ILMN_170518	LOC730184	XM_001132826.1	XM_001132826.1		730184	113412984	XM_001132826.1	LOC730184	XP_001132826.1	ILMN_1835780	0001400463	S	416	TGGGGTCTCAGGTTTGCTTTTGCTGTTTGGATGCCCCAGCACCTTCCCGC	2	+	64725524-64725573	2p14c	PREDICTED: Homo sapiens hypothetical LOC730184 (LOC730184), mRNA.					
Homo sapiens	RefSeq	NM_020230.4	ILMN_25948	PPAN	NM_020230.4	NM_020230.4		56342	47174860	NM_020230.4	PPAN	NP_064615.3	ILMN_1798459	0001230673	S	1303	TGAGGACCTGTTCCCCGAGGCCAAGCAGAAACGGCTTGCCAAGTCTCCAG	19	+	10082538-10082542:10082621-10082665	19p13.2c	Homo sapiens peter pan homolog (Drosophila) (PPAN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15302935] [evidence IDA]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 10944437] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC14226; SSF2; SSF1; BXDC3; SSF; MGC45852	MGC14226; SSF2; SSF1; BXDC3; SSF; MGC45852
Homo sapiens	RefSeq	NM_001001963.1	ILMN_12197	OR2L8	NM_001001963.1	NM_001001963.1		391190	50233863	NM_001001963.1	OR2L8	NP_001001963.1	ILMN_2129658	0003990543	S	528	CTTCTGTGATGTCCCAGCAATGGTGACTCTGGCCTGCATGGACACCTGGG	1	+	246179310-246179359	1q44e	Homo sapiens olfactory receptor, family 2, subfamily L, member 8 (OR2L8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_021705.2	ILMN_21852	NFYA	NM_002505.3	NM_002505.3		4800	31083227	NM_002505.3	NFYA	NP_002496.1	ILMN_1690325	0003870056	A	2428	GGATGTTGGCTTCACTCCTGCAGCACAATGCTGGCCCTAGAAAGCGAGCA	6	+	41174336-41174385	6p21.1h	Homo sapiens nuclear transcription factor Y, alpha (NFYA), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15243141] [evidence IDA]; A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; in Saccharomyces it activates the transcription of genes in response to growth in a nonfermentable carbon source; consists of four known subunits: HAP2, HAP3, HAP4 and HAP5 [goid 16602] [pmid 15243141] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 15243141] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 2000400] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1774067] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2000400] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12741956] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10571058] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12659632] [evidence IPI]	HAP2; NF-YA; CBF-B; CBF-A	CBF-B; HAP2; NF-YA; CBF-A
Homo sapiens	RefSeq	NM_002505.3	ILMN_21852	NFYA	NM_002505.3	NM_002505.3		4800	31083227	NM_002505.3	NFYA	NP_002496.1	ILMN_1713726	0006180072	I	262	GTGTCACTGCTGTGCAGTTGCAGACTGAGGCCCAGGTGGCATCCGCCTCA	6	+	41156539-41156588	6p21.1h	Homo sapiens nuclear transcription factor Y, alpha (NFYA), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15243141] [evidence IDA]; A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; in Saccharomyces it activates the transcription of genes in response to growth in a nonfermentable carbon source; consists of four known subunits: HAP2, HAP3, HAP4 and HAP5 [goid 16602] [pmid 15243141] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 15243141] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 2000400] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1774067] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2000400] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12741956] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10571058] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12659632] [evidence IPI]	HAP2; NF-YA; CBF-B; CBF-A	CBF-B; HAP2; NF-YA; CBF-A
Homo sapiens	RefSeq	XM_941104.1	ILMN_166675	TIMP2	XM_001132362.1	XM_001132362.1		7077	113427618	XM_001132362.1	TIMP2	XP_001132362.1	ILMN_1664583	0005420743	I	215	CCTTAGCCCCAGGAGCGTGTTTCAGGAACTCTCCTCACCTCTGTGTCTTG				17q25.3b-q25.3c	PREDICTED: Homo sapiens TIMP metallopeptidase inhibitor 2 (TIMP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30814] [evidence IEA]; Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade [goid 43408] [evidence IEA]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IEA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Increases the activity of an enzyme [goid 8047] [evidence IEA]; Stops, prevents or reduces the activity of metalloendopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain and contain a chelated metal ion at their active sites which is essential to their catalytic activity [goid 8191] [pmid 8810321] [evidence TAS]		
Homo sapiens	RefSeq	NM_012073.3	ILMN_170746	CCT5	NM_012073.3	NM_012073.3		22948	58331232	NM_012073.3	CCT5	NP_036205.1	ILMN_1706246	0000540170	S	3182	CAGAGAACATACAGCAGCCTTCTTTGGACCACAGTCTTATCCGAGGGGTC	5	+	10266280-10266329	5p15.2c	Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon) (CCT5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A multisubunit ring-shaped complex that mediates protein folding in the cytosol without a cofactor [goid 5832] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	KIAA0098; TCP-1-epsilon; CCT-epsilon; CCTE	KIAA0098; TCP-1-epsilon; CCT-epsilon; CCTE
Homo sapiens	RefSeq	NM_004233.3	ILMN_181889	CD83	NM_004233.3	NM_004233.3		9308	94420687	NM_004233.3	CD83	NP_004224.1	ILMN_2328666	0006620026	A	1628	TGGGTGCTCGCCCACTTGTCCCACTATCTGGGTGCATGATCTTGAGCAAG	6	+	14136299-14136348	6p23b	Homo sapiens CD83 molecule (CD83), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9310491] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8422464] [evidence TAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 1378080] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [pmid 8422464] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9310491] [evidence TAS]		HB15; BL11	HB15; BL11
Homo sapiens	RefSeq	NM_025207.3	ILMN_16974	FLAD1	NM_025207.3	NM_025207.3		80308	41872388	NM_025207.3	FLAD1	NP_079483.3	ILMN_1730325	0003990372	I	234	GCCCAAGGTAGAGCAGACACTTGAGGAGACCAGCTCAGCAAACGGAAGAC	1	+	153222674-153222723	1q21.3e	Homo sapiens FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) (FLAD1), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16643857] [evidence EXP]	The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands [goid 6777] [evidence IEA]	Catalysis of the reaction: ATP + FMN = diphosphate + FAD [goid 3919] [evidence IEA]; Catalysis of the reaction: ATP + FMN = diphosphate + FAD [goid 3919] [pmid 16643857] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + FMN = diphosphate + FAD [goid 3919] [evidence IEA]	RP11-307C12.7; MGC40255; MGC31803; FAD1; FADS; PP591	RP11-307C12.7; MGC40255; MGC31803; FAD1; FADS; PP591
Homo sapiens	RefSeq	XM_945384.1	ILMN_41586	LOC649009	XM_945384.1	XM_945384.1		649009	89036908	XM_945384.1	LOC649009	XP_950477.1	ILMN_1744382	0003930706	I	4	CGTTTGGCTTGGGGATGAAAATTCTAATTCTAGAGTGTAGGTAATGCCCT					PREDICTED: Homo sapiens similar to paraspeckle protein 1, transcript variant 2 (LOC649009), mRNA.					
Homo sapiens	RefSeq	NM_014386.1	ILMN_1921	PKD2L2	NM_014386.1	NM_014386.1		27039	7657458	NM_014386.1	PKD2L2	NP_055201.1	ILMN_1768262	0001030315	S	1773	GACTACCAGCCTGTCACTCAAGAAGAATTTCGAGATGGCACCACAACCAA	5	+	137299463-137299497:137303678-137303692	5q31.2c	Homo sapiens polycystic kidney disease 2-like 2 (PKD2L2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10602361] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10602361] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	XR_041146.1	ILMN_343406	HCG8	XR_041146.1	XR_041146.1		80869	169169200	XR_041146.1	HCG8		ILMN_3242420	0004760711	S	424	CCTGCTCTAGCCACACCTTTGACCTCACTTCAGTTTCTCTGTGTCCAGCC	6	-	30111492-30111541		PREDICTED: Homo sapiens misc_RNA (HCG8), miscRNA.					
Homo sapiens	RefSeq	NM_145647.1	ILMN_20846	WDR67	NM_145647.2	NM_145647.2		93594	142372580	NM_145647.2	WDR67	NP_663622.1	ILMN_1744240	0006040554	S	3246	CCGGGCTCGTCACAGATGTCAAACCCCTCATCTTTTGGCTGCATAGAATG	8	+	124233315-124233360:124233361-124233364	8q24.13b	Homo sapiens WD repeat domain 67 (WDR67), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	Gm85; MGC126773; MGC104222; MGC138159; MGC21654	Gm85; MGC126773; MGC104222; MGC138159; MGC21654
Homo sapiens	RefSeq	NM_005845.2	ILMN_14001	ABCC4	NM_005845.2	NM_005845.2		10257	34452699	NM_005845.2	ABCC4	NP_005836.1	ILMN_1788457	0002450201	S	5313	GGTTTGAAGTGGAGTCTCATGACCTCTCAGAATAAGGTGTCACCTCCCTG	13	-	94470560-94470609	13q32.1a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 4 (ABCC4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 15297306] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15297306] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding the platelet dense granule [goid 31088] [pmid 15297306] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: (5Z,13E)-(15S)-11-alpha,15-dihydroxy-9-oxoprost-13-enoate + NAD+ = (5Z,13E)-11-alpha-hydroxy-9,15-dioxoprost-13-enoate + NADH + H+ [goid 16404] [pmid 7557451] [evidence NAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MOATB; EST170205; MRP4; MOAT-B	MOATB; EST170205; MRP4; MOAT-B
Homo sapiens	RefSeq	XR_017714.2	ILMN_178009	LOC146481	XR_017714.2	XR_017714.2		146481	169210133	XR_017714.2	LOC146481		ILMN_3288213	0006110255	M	1281	GGCTGTAGCCTCTAACTTTCCCACGCTGAGCCCATGGAGGACTAATATCC	16	-	34569361-34569410	16p11.1c	PREDICTED: Homo sapiens misc_RNA (LOC146481), miscRNA.					
Homo sapiens	RefSeq	NM_024534.4	ILMN_177587	FLJ12684	NM_024534.4	NM_024534.4		79584	91982775	NM_024534.4	FLJ12684	NP_078810.1	ILMN_2072622	0003370377	S	2493	AGCAGGTCTTACCGAGAATTCAGCTGCCAAAACCCTCCTCTGAGTGTTCC	4	-	53304642-53304691	4q12a	Homo sapiens hypothetical protein FLJ12684 (FLJ12684), mRNA. XR_001254					
Homo sapiens	RefSeq	NM_001080510.2	ILMN_183365	C17ORF95	NM_001080510.2	NM_001080510.2		124512	126012512	NM_001080510.2	C17orf95	NP_001073979.2	ILMN_2382724	0005090717	A	554	GCAGGTGGTAGGACTAACATGGGGTCATATATCTTGGGATCTTCTGGCTC	17	+	72240792-72240841	17q25.2a	Homo sapiens chromosome 17 open reading frame 95 (C17orf95), mRNA.					
Homo sapiens	RefSeq	XM_940962.1	ILMN_183365	C17ORF95	NM_001080510.2	NM_001080510.2		124512	126012512	NM_001080510.2	C17orf95	NP_001073979.2	ILMN_1688727	0004810279	I	361	TGGCCCAGTACCTTTGGTTTCACAGAAGATCTCTGCCAGGCAAGGCCATC	17	+	72237416-72237465	17q25.2a	Homo sapiens chromosome 17 open reading frame 95 (C17orf95), mRNA.					
Homo sapiens	RefSeq	NM_001080510.2	ILMN_183365	C17ORF95	NM_001080510.2	NM_001080510.2		124512	126012512	NM_001080510.2	C17orf95	NP_001073979.2	ILMN_2280731	0001030440	I	359	CCTGGCCCAGTACCTTTGGTTTCACAGAAGATCTCTGCCAGGCAAGGCCA	17	+	72237414-72237463	17q25.2a	Homo sapiens chromosome 17 open reading frame 95 (C17orf95), mRNA.					
Homo sapiens	RefSeq	NR_002971.1	ILMN_165923	SNORA38	NR_002971.1	NR_002971.1		677820	91680838	NR_002971.1	SNORA38		ILMN_3244597	0003370537	S	1	TCCTCCTACAAAGGCGTGTCTGTGGTTCCCTGTCTTTGGACACGTAAGAA	6	+	31590856-31590905	6p21.33a	Homo sapiens small nucleolar RNA, H/ACA box 38 (SNORA38), small nucleolar RNA.				ACA38	ACA38
Homo sapiens	RefSeq	NM_014802.1	ILMN_18402	KIAA0528	NM_014802.1	NM_014802.1		9847	29789059	NM_014802.1	KIAA0528	NP_055617.1	ILMN_1682572	0001240661	S	4294	CCCCCAGGACAACAAACTGCCCTTAAGAGTCATTTCCTTGTTATCACAGG	12	-	22601581-22601630	12p12.1d	Homo sapiens KIAA0528 (KIAA0528), mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DKFZp779N2044	DKFZp779N2044
Homo sapiens	RefSeq	XM_926920.1	ILMN_41185	LOC643615	XM_926920.2	XM_926920.2		643615	113413088	XM_926920.2	LOC643615	XP_932013.2	ILMN_1746693	0006040139	S	1008	CTGTCAGGTCTCTATGGAACCAGAAGACAACAGGAAGAAAGATGGCGAAG	2	-	97619541-97619590	2q11.2b	PREDICTED: Homo sapiens similar to Nucleolar transcription factor 1 (Upstream-binding factor 1) (UBF-1) (LOC643615), mRNA.					
Homo sapiens	RefSeq	NM_032884.2	ILMN_9460	C1ORF94	NM_032884.2	NM_032884.2		84970	41054803	NM_032884.2	C1orf94	NP_116273.2	ILMN_1793263	0001820731	S	2066	GGCCAACACTGACACAAAAATAGCCCTCCTCACACATGGCACAAGCTACA	1	+	34457098-34457147	1p34.3f	Homo sapiens chromosome 1 open reading frame 94 (C1orf94), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	MGC15882	MGC15882
Homo sapiens	Unigene	Hs.543148	ILMN_106804	HS.543148	Hs.543148		Hs.543148		291842	L13433			ILMN_1817180	0002760296	S	530	CACTTCACAGGTGGGGAGATGGAGTCCTTGGGCATGACTGGCTAGAGGTC	3	+	52011322-52011371		Human chromosome 3p21.1 gene sequence					
Homo sapiens	RefSeq	XM_934641.1	ILMN_45691	LOC653596	XM_934641.1	XM_934641.1		653596	88953497	XM_934641.1	LOC653596	XP_939734.1	ILMN_1807651	0004920037	I	3117	GCACACTGTAACCCAGGAAGAGGGAGAAGGCATGGAGACAACTGATACGG	2	-	110720072-110720121		PREDICTED: Homo sapiens similar to RAN-binding protein 2-like 1 isoform 2, transcript variant 4 (LOC653596), mRNA.					
Homo sapiens	RefSeq	XM_927300.1	ILMN_41700	LOC644057	XM_927300.1	XM_927300.1		644057	88965481	XM_927300.1	LOC644057	XP_932393.1	ILMN_1751113	0002650561	S	2	TGGCGAACACCCTTCCCCCCACCAAACTGAAGCATCCCAGGTCAACTTCA	3	-	97293004-97293053		PREDICTED: Homo sapiens hypothetical protein LOC644057 (LOC644057), mRNA.					
Homo sapiens	Unigene	Hs.569340	ILMN_121521	HS.569340	Hs.569340		Hs.569340		80904863	DA483022			ILMN_1822133	0002320039	S	626	GGTTTTAGAGTTCGGCCTTGGAGGCTCATCTATGTCAACCCACTTACGGG	14	+	59651304-59651350:59651447-59651449		DA483022 FCBBF1 Homo sapiens cDNA clone FCBBF1000024 5, mRNA sequence					
Homo sapiens	RefSeq	NM_152443.1	ILMN_24961	RDH12	NM_152443.1	NM_152443.1		145226	22748934	NM_152443.1	RDH12	NP_689656.1	ILMN_1792182	0004830711	S	1417	AGAGCCCGAGAAATTGGGTCAGTTCCCTCATCAGCACCAGAGGCTCAGCT	14	+	67270614-67270663	14q24.1a	Homo sapiens retinol dehydrogenase 12 (all-trans/9-cis/11-cis) (RDH12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 12226107] [evidence IDA]	The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [pmid 12226107] [evidence IDA]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [pmid 12226107] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [pmid 12226107] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ30273; LCA3	FLJ30273; LCA3
Homo sapiens	RefSeq	NM_001025076.1	ILMN_21178	CUGBP2	NM_001025076.2	NM_001025076.2		10659	134152700	NM_001025076.2	CUGBP2	NP_001020247.1	ILMN_1664170	0002320162	I	82	CACAGCCAGGGTAGGGCTGATAAGGCGCTGATGCGTTGATGGCAGCCTTG	10	+	11207074-11207123	10p14b-p14a	Homo sapiens CUG triplet repeat, RNA binding protein 2 (CUGBP2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Selection of a splice site by components of the assembling spliceosome [goid 6376] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9887331] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9887331] [evidence TAS]	BRUNOL3; ETR-3; NAPOR	BRUNOL3; ETR-3; NAPOR
Homo sapiens	RefSeq	XM_001720903.1	ILMN_351909	KIAA1648	XM_001720903.1	XM_001720903.1		284900	169215556	XM_001720903.1	KIAA1648	XP_001720955.1	ILMN_3272681	0003930327	M	648	TGTGTACTCACACCAGCCAGGAGGAAACAAGCCTGCCTGGGAGGACAGAC	22	+	26720506-26720555	22q12.1c	PREDICTED: Homo sapiens KIAA1648 protein (KIAA1648), mRNA.					
Homo sapiens	RefSeq	NM_032192.2	ILMN_25990	PPP1R1B	NM_032192.2	NM_032192.2		84152	21735491	NM_032192.2	PPP1R1B	NP_115568.2	ILMN_1690096	0000540553	I	477	AAGGACCGCAAGAAGATCCAGTTCTCGGTGCCCGCGCCCCCTAGCCAGCT	17	+	35037181-35037230	17q12c	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 1B (PPP1R1B), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10604473] [evidence TAS]; Any process that stops, prevents or reduces the receptiveness of a female to male advances [goid 7621] [evidence IEA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [pmid 10604473] [evidence TAS]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [pmid 10604473] [evidence TAS]	DARPP-32; FLJ20940; DARPP32	DARPP-32; FLJ20940; DARPP32
Homo sapiens	RefSeq	XM_096885.8	ILMN_169827	LOC145853	XM_096885.9	XM_096885.9		145853	113425288	XM_096885.9	LOC145853	XP_096885.4	ILMN_1655311	0007150280	A	423	CAACTACCACGTCCTGCGCACCGGCTGCTTCCCCTTCATCAAGTACCACT	15	+	65600865-65600914	15q23a	PREDICTED: Homo sapiens hypothetical LOC145853 (LOC145853), mRNA.					
Homo sapiens	RefSeq	NM_183245.1	ILMN_28126	INVS	NM_014425.2	NM_014425.2		27130	34304380	NM_014425.2	INVS	NP_055240.2	ILMN_1763137	0001090730	A	3815	AGCCTGTCCCATAGCAGCCTTCCTCTCACTACTTTCCTGGCATCTAATGC	9	+	102103182-102103231	9q31.1a	Homo sapiens inversin (INVS), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	MGC133081; KIAA0573; INV; NPHP2; MGC133080; NPH2	MGC133081; KIAA0573; INV; NPH2; NPHP2; MGC133080
Homo sapiens	RefSeq	NM_014425.2	ILMN_28126	INVS	NM_014425.2	NM_014425.2		27130	34304380	NM_014425.2	INVS	NP_055240.2	ILMN_1683766	0002600332	I	2762	GAGCACAGAGGAGTTGAGGTCAGGAGCTAGGAGGCTGGAGACATCTACCC	9	+	102094910-102094959	9q31.1a	Homo sapiens inversin (INVS), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	MGC133081; KIAA0573; INV; NPHP2; MGC133080; NPH2	MGC133081; KIAA0573; INV; NPH2; NPHP2; MGC133080
Homo sapiens	RefSeq	NM_000866.1	ILMN_12949	HTR1F	NM_000866.1	NM_000866.1		3355	10835196	NM_000866.1	HTR1F	NP_000857.1	ILMN_1685285	0000540327	S	838	AGGCAAAAGATCTCAGGTACAAGAGAACGGAAAGCAGCCACTACCCTGGG	3	+	88123427-88123476	3p11.2a	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 1F (HTR1F), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8380639] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 8380639] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8380639] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 8380639] [evidence TAS]	HTR1EL; MR77; 5-HT1F	HTR1EL; MR77; 5-HT1F
Homo sapiens	RefSeq	NM_006626.3	ILMN_183338	ZBTB6	NM_006626.4	NM_006626.4		10773	142388591	NM_006626.4	ZBTB6	NP_006617.1	ILMN_1727218	0004210326	S	3692	GAGCACTTTGAGATTTTTGCTGGGGGAGGGGTGTTTTGTGAAAGTGATGG	9	-	125670699-125670748	9q33.2b	Homo sapiens zinc finger and BTB domain containing 6 (ZBTB6), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7958847] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7958847] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7958847] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZNF482; ZID	ZBTB6; ZID
Homo sapiens	RefSeq	XM_932712.1	ILMN_46000	LOC653581	XM_932712.1	XM_932712.1		653581	89035602	XM_932712.1	LOC653581	XP_937805.1	ILMN_1656024	0004640722	S	61	CTTGGGATAGAGATTACAAATTAAACCCATAAGCCAGGTAGACGAGGAGC	12	-	63132832-63132881		PREDICTED: Homo sapiens similar to TANK-binding kinase 1 (LOC653581), mRNA.					
Homo sapiens	RefSeq	XM_001131826.2	ILMN_176808	LOC728590	XM_001131826.2	XM_001131826.2		728590	169168881	XM_001131826.2	LOC728590	XP_001131826.1	ILMN_3226875	0004040026	A	52	CTTGAAAACCCTTACGGAGAAGACCATCACCCTCGAGGCTGAACCCTTGG				6q22.1a	PREDICTED: Homo sapiens similar to rCG23287 (LOC728590), mRNA.					
Homo sapiens	RefSeq	XM_001714800.1	ILMN_352726	LOC100133482	XM_001714800.1	XM_001714800.1		100133482	169172285	XM_001714800.1	LOC100133482	XP_001714852.1	ILMN_3249331	0004120301	S	3	GTGCCCTGTGCGCCACAAAGCGGTTTCTGGCATGGCGGCCCGTCTTTGGA					PREDICTED: Homo sapiens hypothetical protein LOC100133482 (LOC100133482), mRNA.					
Homo sapiens	RefSeq	NM_001025357.1	ILMN_24333	LOC441376	NM_001025357.1	NM_001025357.1		441376	70778888	NM_001025357.1	LOC441376	NP_001020528.1	ILMN_2159290	0001980349	S	447	TGATGCTGCGAATCCGGAATAAAGAAATGCACACGCAAGGGCTGGGCGCG	8	+	118024100-118024121:118024122-118024149	8q24.11a	Homo sapiens AARD protein (LOC441376), mRNA.				AARD	AARD
Homo sapiens	RefSeq	NM_020298.2	ILMN_21840	ABCC9	NM_020298.2	NM_020298.2		10060	110832838	NM_020298.2	ABCC9	NP_064694.2	ILMN_2366473	0004040025	A	4215	CCTGGAGGTCTAGATGCGGTTGTCACTGAAGGTGGGGAGAATTTTAGCGT	12	-	21968793-21968827:21970121-21970135	12p12.1e	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (ABCC9), transcript variant SUR2A-delta-14, mRNA.	A protein complex that comprises four pore-forming (Kir6.x) and four regulatory sulphonylurea receptor (SURx) subunits and forms a transmembrane channel through which ions may pass. The opening and closing of the channel is regulated by ATP: binding of ATP to the Kir6.2 subunit inhibits channel activity, whereas binding of Mg2+-complexed ATP or ADP to the SUR1 subunit stimulates channel activity [goid 8282] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions into a cell or organelle [goid 10107] [evidence ISS]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 18026101] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8826984] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [pmid 8826984] [evidence TAS];  [goid 15459] [evidence ISS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [evidence IEA]	ABC37; FLJ36852; SUR2; CMD1O	ABC37; FLJ36852; SUR2; CMD1O
Homo sapiens	RefSeq	NM_015889.3	ILMN_163846	MED15	NM_001003891.1	NM_001003891.1		51586	51477699	NM_001003891.1	MED15	NP_001003891.1	ILMN_1668748	0005420243	A	3104	TGTGCCGCTGGCATGAGGGCCGTGTCCCCACTGTGAAGGATGAAGAGCAA	22	+	19271648-19271697	22q11.21e	Homo sapiens mediator complex subunit 15 (MED15), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16799563] [evidence IPI]	CTG7A; TIG1; TNRC7; TIG-1; DKFZp686A2214; FLJ42935; DKFZp762B1216; MED15; CAG7A; FLJ42282; ARC105	CTG7A; TIG1; TNRC7; PCQAP; TIG-1; DKFZp686A2214; FLJ42935; DKFZp762B1216; MED15; CAG7A; FLJ42282; ARC105
Homo sapiens	RefSeq	NM_001003891.1	ILMN_163846	MED15	NM_001003891.1	NM_001003891.1		51586	51477699	NM_001003891.1	MED15	NP_001003891.1	ILMN_1706200	0006770672	I	1290	ACCACCGCTGTGTCCGCCATCCCGTCAAGCTCCATCCCTTTGGGCAGACA	22	+	19259457-19259506	22q11.21e	Homo sapiens mediator complex subunit 15 (MED15), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16799563] [evidence IPI]	CTG7A; TIG1; TNRC7; TIG-1; DKFZp686A2214; FLJ42935; DKFZp762B1216; MED15; CAG7A; FLJ42282; ARC105	CTG7A; TIG1; TNRC7; PCQAP; TIG-1; DKFZp686A2214; FLJ42935; DKFZp762B1216; MED15; CAG7A; FLJ42282; ARC105
Homo sapiens	RefSeq	XM_925912.1	ILMN_167816	PTPN20B	NM_001042363.3	NM_001042363.3		26095	109633036	NM_001042363.3	PTPN20B	NP_001035822.1	ILMN_1673099	0003450594	A	160	GTTTTTGAAAATAAAGTTAATTCAGAGAAGGTAAAACTTTCTCTTCGGAA	10	-	48795394-48795443	10q11.22c	Homo sapiens protein tyrosine phosphatase, non-receptor type 20B (PTPN20B), transcript variant 8, mRNA.				bA42B19.1; DKFZp781P23155; DKFZp566K0524	
Homo sapiens	RefSeq	XM_926743.1	ILMN_35550	LOC643409	XM_926743.1	XM_926743.1		643409	89061336	XM_926743.1	LOC643409	XP_931836.1	ILMN_1796686	0001580072	S	1	ATGCACTGCAAGGGACATCAGCAAGCTTCTACCTCAGTAAGCCAGGGAAA	Y	-	17261207-17261256		PREDICTED: Homo sapiens hypothetical protein LOC643409 (LOC643409), mRNA.					
Homo sapiens	RefSeq	NM_016124.3	ILMN_176434	RHD	NM_016124.3	NM_016124.3		6007	77157792	NM_016124.3	RHD	NP_057208.2	ILMN_1651373	0005220615	I	1081	CATCTACATTGTGCTGCTGGTGCTTGATACCGTCGGAGCCGGCAATGGCA	1	+	25505757-25505806	1p36.11c	Homo sapiens Rh blood group, D antigen (RHD), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 1438298] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1438298] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 1438298] [evidence ND ]	RhK562-II; RhII; RhDCw; RHCED; RH; RHXIII; Rh4; DIIIc; RHDVA(TT); RHPII; RhPI; CD240D; RHDel; RH30	RhK562-II; RhII; Rh4; RHDel; RH30; rhesus D; MGC165007; RHCED; RhDCw; RH; RHXIII; DIIIc; Rh30a; RHDVA(TT); RHPII; CD240D; RHCE; RhPI
Homo sapiens	RefSeq	NM_178516.2	ILMN_5288	LOC283849	NM_178516.2	NM_178516.2		283849	31341844	NM_178516.2	LOC283849	NP_848611.1	ILMN_1659543	0004200048	S	3329	GTAGGAGAGAGGAGAAATGCTGGAAAGGTCGACAGTGTGGGGAGTTGGAG	16	-	65772045-65772070:65773010-65773033	16q22.1a	Homo sapiens hypothetical protein LOC283849 (LOC283849), mRNA.				MGC88052	MGC88052
Homo sapiens	RefSeq	NM_002905.2	ILMN_20119	RDH5	NM_002905.2	NM_002905.2		5959	50726951	NM_002905.2	RDH5	NP_002896.2	ILMN_1773395	0000110326	S	1125	CTGCCCCCACCCTGGTACTGCCTGGTGCCTGCCACAAAATAAGCACTAAC	12	+	54404651-54404700	12q13.2b	Homo sapiens retinol dehydrogenase 5 (11-cis/9-cis) (RDH5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10369264] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [pmid 9115228] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	RDH1; HSD17B9	RDH1; HSD17B9
Homo sapiens	RefSeq	NM_001080448.1	ILMN_173095	EPHA6	NM_001080448.1	NM_001080448.1		285220	122937302	NM_001080448.1	EPHA6	NP_001073917.1	ILMN_2371119	0000150228	A	3152	CTGGTGGAGGACATCCTTGTAATGCCAGAGTCCCCTGGTGAAGTTCCGGA				3q11.2c	Homo sapiens EPH receptor A6 (EPHA6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRO57066; FLJ35246; DKFZp434C1418; EPA6	PRO57066; FLJ35246; DKFZp434C1418; EPA6
Homo sapiens	RefSeq	NM_024718.2	ILMN_14780	C9ORF86	NM_024718.2	NM_024718.2		55684	38201703	NM_024718.2	C9orf86	NP_078994.2	ILMN_1760628	0001780762	S	2744	CTCAGGGATGTGACTGAGGCCCAGGAGGGACCTGTGAGGGTCTGTTTACA	9	+	138855074-138855123	9q34.3e	Homo sapiens chromosome 9 open reading frame 86 (C9orf86), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ13045; Parf; FLJ10101; bA216L13.9; RP11-216L13.9; pp8875	FLJ13045; Parf; FLJ10101; bA216L13.9; RP11-216L13.9; pp8875
Homo sapiens	RefSeq	NM_203380.1	ILMN_19654	ACSL5	NM_203380.1	NM_203380.1		51703	42794759	NM_203380.1	ACSL5	NP_976314.1	ILMN_1807914	0006380228	I	161	CTGCTCTGTAGAAAGAACAAACCCTAATCTAGCTCCAGCAAAGAGCCAGG	10	+	114125173-114125222	10q25.2b	Homo sapiens acyl-CoA synthetase long-chain family member 5 (ACSL5), transcript variant 3, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a long-chain carboxylic acid + CoA = AMP + diphosphate + an acyl-CoA; long-chain fatty acids have chain lengths of C12-18 [goid 4467] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	ACS2; FACL5; ACS5	ACS2; FACL5; ACS5
Homo sapiens	RefSeq	XR_041232.1	ILMN_344167	LOC729995	XR_041232.1	XR_041232.1		729995	169168841	XR_041232.1	LOC729995		ILMN_3302300	0000770041	M	78	TTACAGCCCATGCTCAGTACATATCCTAATGAGGAATTGGTCCCTGGCTG					PREDICTED: Homo sapiens misc_RNA (LOC729995), miscRNA.					
Homo sapiens	RefSeq	XR_041232.1	ILMN_344167	LOC729995	XR_041232.1	XR_041232.1		729995	169168841	XR_041232.1	LOC729995		ILMN_3225704	0003710433	A	483	CAGTGGGGACTTCACACCTGGGCCTGAGGGAGCCTCACTGTTTCACTGAA					PREDICTED: Homo sapiens misc_RNA (LOC729995), miscRNA.					
Homo sapiens	RefSeq	NM_153346.2	ILMN_3923	CXORF20	NM_153346.2	NM_153346.2		139105	34222211	NM_153346.2	CXorf20	NP_699177.1	ILMN_2092390	0003360475	S	4338	CCCAGGCTTATCTGGAACTCCTGGGCTCAAGAGGGAGGATCACATTTGAC	X	-	18091195-18091244	Xp22.13c	Homo sapiens chromosome X open reading frame 20 (CXorf20), mRNA.				MGC33653	MGC33653
Homo sapiens	RefSeq	NM_178007.1	ILMN_4356	STARD13	NM_178007.1	NM_178007.1		90627	41281906	NM_178007.1	STARD13	NP_821075.1	ILMN_1666380	0006060632	I	109	CAGGCCCCTTTGTGGTGCTTGGTGCTGCGCTGGTGCAGAGAATGCAAAGA	13	-	32658058-32658107	13q13.1b	Homo sapiens StAR-related lipid transfer (START) domain containing 13 (STARD13), transcript variant beta, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Any particle of coalesced lipids in the cytoplasm of a cell. May include associated proteins [goid 5811] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; The single layer of phopholipids surrounding a lipid storage body [goid 34430] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14697242] [evidence IPI]	FLJ37385; DLC2; GT650	FLJ37385; DLC2; GT650
Homo sapiens	RefSeq	NM_033437.2	ILMN_19772	PDE5A	NM_001083.3	NM_001083.3		8654	61744434	NM_001083.3	PDE5A	NP_001074.2	ILMN_1810836	0001770333	A	6884	GAGATGGTCAAGGTGGTTTTCCATTGTGCAAATTCTTCACCTGTCAGTGG	4	-	120635053-120635102	4q27a	Homo sapiens phosphodiesterase 5A, cGMP-specific (PDE5A), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]; The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9187] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of cyclic GMP, guanosine 3',5'-phosphate [goid 46069] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyclic GMP, guanosine 3',5'-phosphate [goid 46069] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]	CGB-PDE; PDE5; PDE5A1; CN5A	CGB-PDE; PDE5; PDE5A1; CN5A
Homo sapiens	RefSeq	XM_928004.1	ILMN_32314	LOC644917	XM_928004.1	XM_928004.1		644917	88992508	XM_928004.1	LOC644917	XP_933097.1	ILMN_1786056	0006290692	S	69	CAGCGCCTTTGGGTCGGTACTGCTGTGGGACCCAAAGCACCCTCCGCAGC	6	+	16289116-16289165		PREDICTED: Homo sapiens similar to T-box 1 isoform C (LOC644917), mRNA.					
Homo sapiens	RefSeq	XR_039391.1	ILMN_349669	LOC731642	XR_039391.1	XR_039391.1		731642	169165389	XR_039391.1	LOC731642		ILMN_3228508	0006590059	A	373	TCACTCCACCAGATGAAGGTGGAGGTGATCGCAGCCAGCAAGTGCCGCCG					PREDICTED: Homo sapiens misc_RNA (LOC731642), miscRNA.					
Homo sapiens	RefSeq	XM_001716314.1	ILMN_348633	LOC100130934	XM_001716314.1	XM_001716314.1		100130934	169214865	XM_001716314.1	LOC100130934	XP_001716366.1	ILMN_3268813	0000130520	M	1010	CATGCCTTACTCAACATCAGAGAACCCACACAACAGGAAAACCCAGCAAG				20q13.12c	PREDICTED: Homo sapiens similar to zinc finger protein 663 (LOC100130934), mRNA.					
Homo sapiens	RefSeq	XM_942520.1	ILMN_26486	PDGFA	NM_033023.3	NM_033023.3		5154	77695918	NM_033023.3	PDGFA	NP_148983.1	ILMN_1685982	0003840112	A	745	CTAAGGGATGGTACTGAATTTCGCCGCCACAGGAGACCGGCTGGAGCGCC	7	-	525213-525262	7p22.3d-p22.3c	Homo sapiens platelet-derived growth factor alpha polypeptide (PDGFA), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 287022] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3754619] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 2836953] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 291037] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membrane of the platelet dense granule [goid 31089] [pmid 287022] [evidence EXP]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand [goid 1775] [pmid 10508235] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2842868] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 10508235] [evidence TAS]; Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol [goid 10512] [pmid 2538439] [evidence IDA]; Any process that decreases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue [goid 10544] [pmid 2538439] [evidence IDA]; Any process that modulates the frequency, rate or extent of smooth muscle cell migration [goid 14910] [pmid 9409235] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 17470632] [evidence IDA]; Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 32956] [pmid 10508235] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 10508235] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 2836953] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 2439522] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 10806482] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 2836953] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 2536956] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 2439522] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 2439522] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 10806482] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [pmid 9409235] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 2836953] [evidence IDA]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 2536956] [evidence IPI]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 2439522] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 3754619] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 2836953] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 2836953] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 291037] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 2538439] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 7073684] [evidence IPI]; Interacting selectively with platelet-derived growth factor [goid 48407] [pmid 7073684] [evidence IPI]	PDGF-A; PDGF1	
Homo sapiens	RefSeq	NM_033023.3	ILMN_26486	PDGFA	NM_033023.3	NM_033023.3		5154	77695918	NM_033023.3	PDGFA	NP_148983.1	ILMN_2342695	0001170653	A	1522	GTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGAACACTCGGG	7	-	504589-504638	7p22.3d-p22.3c	Homo sapiens platelet-derived growth factor alpha polypeptide (PDGFA), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 287022] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3754619] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 2836953] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 291037] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membrane of the platelet dense granule [goid 31089] [pmid 287022] [evidence EXP]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; A change in the morphology or behavior of a cell resulting from exposure to an activating factor such as a cellular or soluble ligand [goid 1775] [pmid 10508235] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2842868] [evidence TAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 10508235] [evidence TAS]; Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol [goid 10512] [pmid 2538439] [evidence IDA]; Any process that decreases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue [goid 10544] [pmid 2538439] [evidence IDA]; Any process that modulates the frequency, rate or extent of smooth muscle cell migration [goid 14910] [pmid 9409235] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 17470632] [evidence IDA]; Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 32956] [pmid 10508235] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 10508235] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 2836953] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 2439522] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 10806482] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 2836953] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 2536956] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 2439522] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 2439522] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 10806482] [evidence IDA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [pmid 9409235] [evidence IDA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 2836953] [evidence IDA]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 2536956] [evidence IPI]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 2439522] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 3754619] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 2836953] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 2836953] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 291037] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 2538439] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 7073684] [evidence IPI]; Interacting selectively with platelet-derived growth factor [goid 48407] [pmid 7073684] [evidence IPI]	PDGF-A; PDGF1	PDGF-A; PDGF1
Homo sapiens	RefSeq	XR_041473.1	ILMN_341971	FLJ37786	XR_041473.1	XR_041473.1		642691	169163326	XR_041473.1	FLJ37786		ILMN_3232128	0003850427	I	1989	TCTATTCTTTGCAGTATCACTTAAAGGTGTTTATTTAGCGGCAAAGATTT	2	-	91273457-91273506	2p11.1d	PREDICTED: Homo sapiens hypothetical LOC642691 (FLJ37786), miscRNA.					
Homo sapiens	RefSeq	XR_041473.1	ILMN_341971	FLJ37786	XR_041473.1	XR_041473.1		642691	169163326	XR_041473.1	FLJ37786		ILMN_3184599	0003370025	A	217	ATGAAGTCAAAGCTGCCTCCTCCTTCAGGAAGACTTTGCTCCCATAGCTG	2	-	91275229-91275278	2p11.1d	PREDICTED: Homo sapiens hypothetical LOC642691 (FLJ37786), miscRNA.					
Homo sapiens	RefSeq	NM_019598.2	ILMN_6017	KLK12	NM_019598.2	NM_019598.2		43849	22208985	NM_019598.2	KLK12	NP_062544.1	ILMN_1725912	0004050398	A	827	CCACTCTTGTTGGCCTGGGAACTTCTTGGAACTTTAACTCCTGCCAGCCC	19	-	56224228-56224277	19q13.33d	Homo sapiens kallikrein-related peptidase 12 (KLK12), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 15300858] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11054574] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MGC42603; KLKL5; KLK-L5; DKFZp686H1078	MGC42603; KLKL5; KLK-L5; DKFZp686H1078
Homo sapiens	RefSeq	NM_019598.2	ILMN_6017	KLK12	NM_019598.2	NM_019598.2		43849	22208985	NM_019598.2	KLK12	NP_062544.1	ILMN_2411511	0007050047	A	639	TGTGTATCCCGGGAGAATCACGAGCAACATGGTGTGTGCAGGCGGCGTCC	19	-	56225875-56225924	19q13.33d	Homo sapiens kallikrein-related peptidase 12 (KLK12), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 15300858] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11054574] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	MGC42603; KLKL5; KLK-L5; DKFZp686H1078	MGC42603; KLKL5; KLK-L5; DKFZp686H1078
Homo sapiens	RefSeq	NR_004402.1	ILMN_333849	RNU1F1	NR_004402.1	NR_004402.1		26866	161087022	NR_004402.1	RNU1F1		ILMN_3240220	0005670753	S	3	ACTTACCTGGCAGGGGAGATACCATGATCACGAAGGTGGTTTTCCCAGGG	14	-	35025543-35025592		Homo sapiens RNA, U1F1 small nuclear (RNU1F1), small nuclear RNA.				U1F; HSD7	U1F; HSD7
Homo sapiens	RefSeq	XM_942139.1	ILMN_40652	LOC652607	XM_942139.1	XM_942139.1		652607	89063234	XM_942139.1	LOC652607	XP_947232.1	ILMN_1766196	0006400315	S	790	GTCCATCAAGTTAAAGAGGCTTCCCAGAAAGCAGTTAACAGCGCCACTGG					PREDICTED: Homo sapiens similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) (LOC652607), mRNA.					
Homo sapiens	RefSeq	XR_040185.1	ILMN_342999	ZNF738	XR_040185.1	XR_040185.1		148203	169213612	XR_040185.1	ZNF738		ILMN_3225102	0000290600	A	2260	GTCCCAGCTACTCTGGAGGCCTAGGTGGGAGAATCGCTTGAACCCAGGAG	19	+	21359978-21360027	19p12d	PREDICTED: Homo sapiens misc_RNA (ZNF738), partial miscRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	XR_015606.1	ILMN_174802	LOC728059	XR_015606.1	XR_015606.1		728059	113414062	XR_015606.1	LOC728059		ILMN_3289090	0004040519	M	742	GTCAAACAATGTCAGATACCACATTCAAGGTCTTGCGCCGGCAGCTTCCG				2q24.2a	PREDICTED: Homo sapiens misc_RNA (LOC728059), miscRNA.					
Homo sapiens	RefSeq	XR_015606.1	ILMN_174802	LOC728059	XR_015606.1	XR_015606.1		728059	113414062	XR_015606.1	LOC728059		ILMN_3212591	0001580564	A	145	AGGGCAGCACGTGCATTTGCCCATTATAACATGGATCAGTTCACACCCGT				2q24.2a	PREDICTED: Homo sapiens misc_RNA (LOC728059), miscRNA.					
Homo sapiens	RefSeq	NM_053030.2	ILMN_15759	MYLK	NM_053030.2	NM_053030.2		4638	47132570	NM_053030.2	MYLK	NP_444258.1	ILMN_1663427	0003710762	I	37	CCCAGCCCCTTTTCCTCCTGCTACTTTCCTTTTTCCCTACACTGGTTGCA	3	-	124902543-124902592	3q21.1c	Homo sapiens myosin, light polypeptide kinase (MYLK), transcript variant 5, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8575746] [evidence TAS]	Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + (myosin-light-chain) = ADP + (myosin-light-chain) phosphate [goid 4687] [pmid 8575746] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp686I10125; FLJ12216; MLCK210; MLCK108; KRP; MLCK	DKFZp686I10125; FLJ12216; MLCK108; KRP; MLCK210; MLCK
Homo sapiens	RefSeq	XM_936481.1	ILMN_41872	LOC647407	XM_936481.1	XM_936481.1		647407	89065449	XM_936481.1	LOC647407	XP_941574.1	ILMN_1718739	0005260398	S	3	GGAGGAAAAGGTCAAGTCCCAGCCCCCTCCATTTGAAGAAAGGTTTTTTC					PREDICTED: Homo sapiens similar to SLIT-ROBO Rho GTPase-activating protein 2 (srGAP2) (Formin-binding protein 2) (LOC647407), mRNA.					
Homo sapiens	RefSeq	XR_039195.1	ILMN_350163	LOC729891	XR_039195.1	XR_039195.1		729891	169192142	XR_039195.1	LOC729891		ILMN_3247569	0006860706	S	91	AACCATGCAGTGGCTCCCAGCGGCCCTGCAGCCACCACCAGCATCCGTTT	10	+	38782211-38782260	10p11.21a	PREDICTED: Homo sapiens misc_RNA (LOC729891), miscRNA.					
Homo sapiens	RefSeq	NM_198318.1	ILMN_19999	PRMT1	NM_198318.1	NM_198318.1		3276	38195086	NM_198318.1	PRMT1	NP_938074.1	ILMN_2347234	0003460669	A	628	AGATGTGGCCATTAAGGAGCCCCTAGTGGATGTCGTGGACCCCAAACAGC	19	+	54880034-54880083	19q13.33b	Homo sapiens protein arginine methyltransferase 1 (PRMT1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10749851] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9029147] [evidence TAS]	The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom [goid 6479] [pmid 9545638] [evidence TAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9029147] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8663146] [evidence IPI]; Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule [goid 8170] [pmid 9029147] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	IR1B4; ANM1; HRMT1L2; HCP1	IR1B4; ANM1; HRMT1L2; HCP1
Homo sapiens	RefSeq	XM_942968.1	ILMN_137817	LOC647447	XM_942968.1	XM_942968.1		647447	88988763	XM_942968.1	LOC647447	XP_948061.1	ILMN_1707954	0005670474	I	343	AAATTGAACACAAATGTGGTGGAGACGGGACAGGGCAGGTGGAAATTCAC					PREDICTED: Homo sapiens hypothetical protein LOC647446, transcript variant 6 (LOC647447), mRNA.					
Homo sapiens	RefSeq	NR_024075.1	ILMN_365420	EMR4P	NR_024075.1	NR_024075.1		326342	196162699	NR_024075.1	EMR4P		ILMN_3243190	0007320324	S	2350	ACTGGCATCTGGATTCAGCTCATAGTTCCCTTTCTGGCCTCTCTGCTGTA	19	-	6952843-6952892	19p13.2e	Homo sapiens egf-like module containing, mucin-like, hormone receptor-like 4 pseudogene (EMR4P), non-coding RNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	XM_001719439.1	ILMN_341669	LOC100131205	XM_001719439.1	XM_001719439.1		100131205	169161167	XM_001719439.1	LOC100131205	XP_001719491.1	ILMN_3283775	0005690369	M	3	CAACCAAGATCTTCTTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCC	1	-	210291974-210292014:210304658-210304666	1q32.3b	PREDICTED: Homo sapiens hypothetical protein LOC100131205 (LOC100131205), mRNA.					
Homo sapiens	RefSeq	XR_038970.1	ILMN_346010	LOC100134571	XR_038970.1	XR_038970.1		100134571	169170279	XR_038970.1	LOC100134571		ILMN_3244483	0004570274	S	379	AGTATGTAGCCCTGCATTTCCTGGGCCTGTGGCTGGTACTGCTGCTCTGG	7	+	5082784-5082833		PREDICTED: Homo sapiens misc_RNA (LOC100134571), miscRNA.					
Homo sapiens	RefSeq	NM_001005366.1	ILMN_27878	KDM2B	NM_001005366.1	NM_001005366.1		84678	54112379	NM_001005366.1	KDM2B	NP_001005366.1	ILMN_1651464	0001780528	I	338	TCCTTCCCCCCTCGGCCAAAATGCAGGGGGCAGGAGTGTTGACAATTAAT	12	-	122017977-122018026	12q24.31b	Homo sapiens lysine (K)-specific demethylase 2B (KDM2B), transcript variant 2, mRNA.				CXXC2; Fbl10; JHDM1B; PCCX2; KDM2B	CXXC2; Fbl10; JHDM1B; PCCX2; KDM2B
Homo sapiens	RefSeq	NM_005591.3	ILMN_6592	MRE11A	NM_005591.3	NM_005591.3		4361	56550105	NM_005591.3	MRE11A	NP_005582.1	ILMN_1709483	0005260731	I	1981	GGTCTGGAGACTTCTACCCGTAGCAGGAACTCAAAGACTGCTGTGTCAGC	11	-	94179001-94179050	11q21b	Homo sapiens MRE11 meiotic recombination 11 homolog A (S. cerevisiae) (MRE11A), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10802669] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9651580] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA recombination during mitosis [goid 19] [pmid 8530104] [evidence TAS]; The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends [goid 6303] [pmid 9651580] [evidence TAS]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 9931460] [evidence TAS]; The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 9705271] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 8530104] [evidence TAS]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9931460] [evidence TAS]	Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks [goid 14] [pmid 9705271] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9651580] [evidence TAS]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 10802669] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9590181] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 9651580] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	MRE11B; MRE11; ATLD; HNGS1	MRE11B; MRE11; ATLD; HNGS1
Homo sapiens	RefSeq	NM_018133.2	ILMN_21828	MSL2	NM_018133.2	NM_018133.2		55167	38570120	NM_018133.2	MSL2	NP_060603.2	ILMN_1766859	0006020717	S	4041	GGGTGGGGGTGGGCTAAAGCCATAGGAAGAAAAATGTGATGTATGTGTCC	3	-	137351055-137351104	3q22.2b	Homo sapiens male-specific lethal 2 homolog (Drosophila) (MSL2), mRNA.				RNF184; FLJ10546; KIAA1585; MSL-2; msl-2	KIAA1585; RNF184; FLJ10546; MSL-2; msl-2
Homo sapiens	RefSeq	NM_018133.2	ILMN_21828	MSL2	NM_018133.2	NM_018133.2		55167	38570120	NM_018133.2	MSL2	NP_060603.2	ILMN_3236373	0003930307	S	3877	GTACAAGACATGGAGAAGAAACCTTTGGACACAGAGCAGATGACACCTCC	3	-	137351219-137351268	3q22.2b	Homo sapiens male-specific lethal 2 homolog (Drosophila) (MSL2), mRNA.				RNF184; FLJ10546; KIAA1585; MSL-2; msl-2	KIAA1585; RNF184; FLJ10546; MSL-2; msl-2
Homo sapiens	RefSeq	NM_033151.2	ILMN_32162	ABCC11	NM_033151.3	NM_033151.3		85320	86786800	NM_033151.3	ABCC11	NP_149163.2	ILMN_1732140	0002600541	I	247	CCCCCTCTTCTGGCTGCTCAAGGCGAGATCTAAGCTTCTTCTAACTCCTG	16	-	48265886-48265935	16q12.1a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 11 (ABCC11), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	WW; MRP8; EWWD	MRP8
Homo sapiens	RefSeq	NM_001008726.1	ILMN_166948	WDR89	NM_001008726.1	NM_001008726.1		112840	57165358	NM_001008726.1	WDR89	NP_001008726.1	ILMN_1709825	0000150440	I	1	GCCAGAAAGCAGATTTTCACTTGGGAAGAGACGACCCGTAGTATGGGATG	14	-	64108075-64108124	14q23.2b	Homo sapiens WD repeat domain 89 (WDR89), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]			MSTP050; MGC9907; C14orf150	MSTP050; MGC9907; C14orf150
Homo sapiens	RefSeq	NM_173611.2	ILMN_181452	FAM98B	NM_173611.2	NM_173611.2		283742	109452586	NM_173611.2	FAM98B	NP_775882.2	ILMN_2313330	0006770397	A	874	AGATCATTAGGACAAGTAGTGGCACCAGCCGGGAGAAGACCGCATGTGCC	15	+	36560894-36560943	15q14d	Homo sapiens family with sequence similarity 98, member B (FAM98B), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ38426	FLJ38426
Homo sapiens	RefSeq	NM_017706.3	ILMN_7475	WDR55	NM_017706.4	NM_017706.4		54853	144953910	NM_017706.4	WDR55	NP_060176.2	ILMN_1678957	0005700669	S	2298	GAAGATGCACTCAAAGCACTGATGTGAGGAAGTACTTGCCCCGTAGCAGC	5	+	140030455-140030504	5q31.3b	Homo sapiens WD repeat domain 55 (WDR55), mRNA.				FLJ21702; FLJ20195	FLJ21702; FLJ20195
Homo sapiens	RefSeq	NM_015375.2	ILMN_370437	DSTYK	NM_015375.2	NM_015375.2		25778	218563733	NM_015375.2	DSTYK	NP_056190.1	ILMN_3180989	0001170162	A	7332	GGGTAAGGAGGGAGTGGCCTTGAGACACTTGTATTCCAAACTCTCCTGGA	1	-	205112158-205112207	1q32.1g	Homo sapiens dual serine/threonine and tyrosine protein kinase (DSTYK), transcript variant 1, mRNA.					
Homo sapiens	RefSeq	NR_002965.1	ILMN_163356	SNORA29	NR_002965.1	NR_002965.1		677812	91680832	NR_002965.1	SNORA29		ILMN_3236594	0001440730	S	58	GGGATAGATTAAACTTGCCATGATCTGAAGAGGGAGGGTTTTTTCATGTC	6	-	160206658-160206707	6q25.3f	Homo sapiens small nucleolar RNA, H/ACA box 29 (SNORA29), small nucleolar RNA.				ACA29	ACA29
Homo sapiens	RefSeq	NM_130468.2	ILMN_24207	CHST14	NM_130468.2	NM_130468.2		113189	31542479	NM_130468.2	CHST14	NP_569735.1	ILMN_1743340	0002630369	S	1910	AGCTCTGCAGGCACCCAAAGACCCTCTGTGCCCAGCCTCTTCCTTGAGTT	15	+	38552414-38552463	15q15.1a	Homo sapiens carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 (CHST14), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11470797] [evidence NAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving dermatan sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are dermatan sulfate (chondroitin sulfate B). Dermatan sulfate is a glycosaminoglycan with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units [goid 50655] [pmid 11470797] [evidence IDA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-galactosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-galactosamine 4-sulfate [goid 1537] [pmid 11470797] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with phosphate [goid 42301] [pmid 11470797] [evidence NAS]	HNK1ST; HD4ST; D4ST-1; D4ST1	HNK1ST; HD4ST; D4ST-1; D4ST1
Homo sapiens	RefSeq	NM_001707.2	ILMN_13781	BCL7B	NM_001707.2	NM_001707.2		9275	20336472	NM_001707.2	BCL7B	NP_001698.2	ILMN_1754199	0002850360	I	1029	TCTGGACGGAGCTGCTGGCAGCTTCTGCGAGAAGAGAGAGATGTGGAAGG	7	-	72951274-72951323	7q11.23a-q11.23b	Homo sapiens B-cell CLL/lymphoma 7B (BCL7B), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8605326] [evidence NAS]		
Homo sapiens	Unigene	Hs.583554	ILMN_135735	HS.583554	Hs.583554		Hs.583554		13528253	BG536707			ILMN_1851667	0000050639	S	165	TGCCAGGGATCTGGGGGGCAGCCTTGTGGCTTCTGGTCGACTTGGGATCT	7	+	150582359-150582408		602564836F1 NIH_MGC_77 Homo sapiens cDNA clone IMAGE:4689465 5, mRNA sequence					
Homo sapiens	RefSeq	NR_031755.1	ILMN_388677	MIR2278	NR_031755.1	NR_031755.1		100313780	269847742	NR_031755.1	MIR2278		ILMN_3309294	0001980152	S	16	AGAGCAGTGTGTGTTGCCTGGGGACTGTGTGGACTGGTATCACCCAGACA					Homo sapiens microRNA 2278 (MIR2278), microRNA.					
Homo sapiens	RefSeq	NM_001683.2	ILMN_22931	ATP2B2	NM_001683.2	NM_001683.2		491	48255948	NM_001683.2	ATP2B2	NP_001674.2	ILMN_2381938	0003520193	A	6091	GGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGG	3	-	10343273-10343322	3p25.3b	Homo sapiens ATPase, Ca++ transporting, plasma membrane 2 (ATP2B2), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15765049] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11786550] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1313367] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12624087] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7929331] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12624087] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 15829536] [evidence IMP]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [pmid 11259493] [evidence IDA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 7929331] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 1313367] [evidence NAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans) [goid 5388] [pmid 7929331] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 7929331] [evidence IDA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 7929331] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 7929331] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 7929331] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 11786550] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 11786550] [evidence IDA]	PMCA2a; PMCA2; PMCA2i	PMCA2; PMCA2i; PMCA2a
Homo sapiens	RefSeq	NM_001362.2	ILMN_10016	DIO3	NM_001362.2	NM_001362.2		1735	55750010	NM_001362.2	DIO3	NP_001353.3	ILMN_2075067	0006180348	S	1758	CCGTGAGGTAACCACCTTAAATGGGAGGGAAGTTGGGGTGTCTGCTTTGG	14	+	101099198-101099247	14q32.31b	Homo sapiens deiodinase, iodothyronine, type III (DIO3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42404] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42446] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3,5,3'-L-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + donor-H2 [goid 4800] [pmid 7593630] [evidence NAS]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Catalysis of the reaction: 3,3',5'-triiodo-L-thyronine + iodide + A + H+ = L-thyroxine + AH2 [goid 33798] [evidence IEA]	D3; TXDI3; DIOIII; 5DIII	D3; TXDI3; DIOIII; 5DIII
Homo sapiens	RefSeq	Hs.569290	ILMN_182247	LOC730684	XM_001127972.1	XM_001127972.1		730684	113424420	XM_001127972.1	LOC730684	XP_001127972.1	ILMN_1909473	0007050253	S	202	CGCCACAAGGAATGCCCACAGCACCAGAAGCTGAAAGAGGCAAGAAATGG					PREDICTED: Homo sapiens hypothetical protein LOC730684 (LOC730684), mRNA.					
Homo sapiens	RefSeq	NM_000107.1	ILMN_425	DDB2	NM_000107.1	NM_000107.1		1643	4557514	NM_000107.1	DDB2	NP_000098.1	ILMN_1660817	0002000482	S	1436	GAGGAAGCCAGGACACGGAAGTGAGAGACACTAAAGAAGGTGTGGGCCAG	11	+	47216953-47216976:47216977-47217002	11p11.2b	Homo sapiens damage-specific DNA binding protein 2, 48kDa (DDB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 12732143] [evidence IDA]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 12732143] [evidence IDA]; The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The repair of UV-induced T-T, C-T and C-C dimers [goid 6290] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 12732143] [evidence IDA]; The ubiquitination by a protein of one or more of its own amino acid residues, or residues on an identical protein. Ubiquitination occurs on the lysine residue by formation of an isopeptide crosslink [goid 51865] [pmid 12732143] [evidence IDA]	Interacting selectively with damaged DNA [goid 3684] [pmid 8407967] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 12732143] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12732143] [evidence IPI]	FLJ34321	FLJ34321
Homo sapiens	RefSeq	XM_001716472.1	ILMN_345479	LOC138864	XM_001716472.1	XM_001716472.1		138864	169179752	XM_001716472.1	LOC138864	XP_001716524.1	ILMN_3232943	0000070373	I	433	CTCAATCCCCAAATGCCAGTACAAACACTAGCCTGGCAAAAAGTCACCTG				9p23a	PREDICTED: Homo sapiens similar to hCG1809973 (LOC138864), mRNA.					
Homo sapiens	RefSeq	XM_001716472.1	ILMN_345479	LOC138864	XM_001716472.1	XM_001716472.1		138864	169179752	XM_001716472.1	LOC138864	XP_001716524.1	ILMN_3211305	0002570440	A	1	ATGGCTGGGCAAAAACTTGCTCTAAAAATCATTGACTGGGTAACTTCTTG				9p23a	PREDICTED: Homo sapiens similar to hCG1809973 (LOC138864), mRNA.					
Homo sapiens	RefSeq	XM_935599.1	ILMN_37092	LOC641858	XM_935599.1	XM_935599.1		641858	89027623	XM_935599.1	LOC641858	XP_940692.1	ILMN_1668397	0003870725	S	61	GCCTGTCAGGGATATGACAAGCAGGCTGAGATCTGGTTCAGCAACATCAC					PREDICTED: Homo sapiens similar to chaperonin containing TCP1, subunit 4 (delta) (LOC641858), mRNA.					
Homo sapiens	RefSeq	NM_133376.1	ILMN_24435	ITGB1	NM_033668.1	NM_033668.1		3688	19743818	NM_033668.1	ITGB1	NP_391988.1	ILMN_1714820	0000110440	A	2035	TTACCCCAGCCGGTCCAACCTGATCCTGTGTCCCATTGTAAGGAGAAGGA	10	-	33239236-33239285	10p11.22b	Homo sapiens integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (ITGB1), transcript variant 1D, mRNA.	Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 11919189] [evidence TAS]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 9552005] [evidence NAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 1715889] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [pmid 9415431] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [pmid 9415431] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 10201960] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 10201960] [evidence TAS]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 1715889] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 11919189] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 1715889] [evidence IC ]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14681217] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9552005] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GPIIA; VLAB; MDF2; FNRB; CD29; MSK12	GPIIA; VLAB; MDF2; FNRB; CD29; MSK12
Homo sapiens	RefSeq	NM_033668.1	ILMN_24435	ITGB1	NM_033668.1	NM_033668.1		3688	19743818	NM_033668.1	ITGB1	NP_391988.1	ILMN_1754233	0005910139	I	2363	ATAATTTCAAGAATCCAAACTACGGACGTAAAGCTGGTCTCTAAATTGCC	10	-	33230569-33230569:33235997-33236002:33236003-33236045	10p11.22b	Homo sapiens integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (ITGB1), transcript variant 1D, mRNA.	Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 11919189] [evidence TAS]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 9552005] [evidence NAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 1715889] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [pmid 9415431] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [pmid 9415431] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 10201960] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 10201960] [evidence TAS]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 1715889] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 11919189] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 1715889] [evidence IC ]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14681217] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9552005] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GPIIA; VLAB; MDF2; FNRB; CD29; MSK12	GPIIA; VLAB; MDF2; FNRB; CD29; MSK12
Homo sapiens	RefSeq	NM_003685.1	ILMN_173590	KHSRP	NM_003685.2	NM_003685.2		8570	154354999	NM_003685.2	KHSRP	NP_003676.2	ILMN_1673936	0007000470	S	2630	CCTGCCTCTCTGAGGATAAAGCAATTCATTTTCTCCCACCCTCGGCCCTC	19	-	6413689-6413738	19p13.3a	Homo sapiens KH-type splicing regulatory protein (KHSRP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 9136930] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 10911989] [evidence TAS]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 10911989] [evidence TAS]	FUBP2; MGC99676; KSRP; FBP2	FUBP2; MGC99676; KSRP; FBP2
Homo sapiens	RefSeq	XM_936242.1	ILMN_138194	VAC14	XM_936242.1	XM_936242.1		55697	89041008	XM_936242.1	VAC14	XP_941335.1	ILMN_1723695	0000990228	I	2891	CCCCTCTTCTCAGGGATGTGTTTTTCCCCTGGCTTATCGCAGTGGCTCGC				16q22.1f	PREDICTED: Homo sapiens Vac14 homolog (S. cerevisiae) (VAC14), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8611628] [evidence NAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 8611628] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XM_001716715.1	ILMN_348510	LOC389024	XM_001716715.1	XM_001716715.1		389024	169163740	XM_001716715.1	LOC389024	XP_001716767.1	ILMN_3291329	0004900059	M	1038	GCTGAGAATTCAGCTGGACAGCCATAGGGGCTCTGGCATGGAGACTGGAA					PREDICTED: Homo sapiens similar to hCG2005742 (LOC389024), mRNA.					
Homo sapiens	RefSeq	NM_015720.1	ILMN_26815	PODXL2	NM_015720.1	NM_015720.1		50512	7657464	NM_015720.1	PODXL2	NP_056535.1	ILMN_1657347	0003360669	S	1969	TTCCCGCTTCCCCCGACTTCACACGGCGGCTTCGGACCAACTCCCTCACT	3	+	128874153-128874202	3q21.3b	Homo sapiens podocalyxin-like 2 (PODXL2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10722749] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any glycan (polysaccharide) containing a substantial proportion of aminomonosaccharide residues [goid 5539] [pmid 10722749] [evidence TAS]	PODLX2	PODLX2
Homo sapiens	Unigene	Hs.516646	ILMN_99086	HS.516646	Hs.516646		Hs.516646		34532803	AK126342			ILMN_1841334	0000730341	S	2930	AAGCCTTTGTATGTGTCCTCAGGGGGCAGACCGACTTTAAGAGGGACCAG	2	+	208175089-208175138		Homo sapiens cDNA FLJ44370 fis, clone TRACH3008902					
Homo sapiens	RefSeq	NM_018943.1	ILMN_11580	TUBA8	NM_018943.1	NM_018943.1		51807	9507214	NM_018943.1	TUBA8	NP_061816.1	ILMN_1793659	0003360575	S	1856	CCCGCTCCGGGCATCATCTAGACTTAGCATGCATTCACTCCCCCATCACA	22	+	16994336-16994385	22q11.21a	Homo sapiens tubulin, alpha 8 (TUBA8), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein [goid 51258] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	TUBAL2	TUBAL2
Homo sapiens	RefSeq	NR_030597.1	ILMN_388083	MIR876	NR_030597.1	NR_030597.1		100126310	262206051	NR_030597.1	MIR876		ILMN_3310005	0005900768	S	6	GCTGTGGATTTCTTTGTGAATCACCATATCTAAGCTAATGTGGTGGTGGT				9p21.1d	Homo sapiens microRNA 876 (MIR876), microRNA.					
Homo sapiens	RefSeq	NM_007182.4	ILMN_8297	RASSF1	NM_007182.4	NM_007182.4		11186	25777678	NM_007182.4	RASSF1	NP_009113.3	ILMN_2393573	0000270026	A	1408	GGCCTGCAGCAGGAGTGGTGCAGACAGAAGTCTCCTCAATTTTTGTCTCA	3	-	50367708-50367757	3p21.31b	Homo sapiens Ras association (RalGDS/AF-6) domain family member 1 (RASSF1), transcript variant A, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14743218] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 12024041] [evidence IMP]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 15109305] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12762840] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11333291] [evidence TAS]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11857081] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	REH3P21; RASSF1A; 123F2; RDA32; NORE2A	REH3P21; RDA32; RASSF1A; 123F2; NORE2A
Homo sapiens	RefSeq	NM_016205.1	ILMN_13763	PDGFC	NM_016205.1	NM_016205.1		56034	9994186	NM_016205.1	PDGFC	NP_057289.1	ILMN_1683023	0004850327	S	2621	GATCCAGCCATTACTAACCTATTCCTTTTTTGGGGAAATCTGAGCCTAGC	4	-	157902550-157902599	4q32.1c	Homo sapiens platelet derived growth factor C (PDGFC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [evidence IEA]; Any process that modulates the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50730] [evidence IEA]	Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	SCDGF	SCDGF
Homo sapiens	RefSeq	XR_038167.1	ILMN_348191	LOC100128973	XR_038167.1	XR_038167.1		100128973	169211057	XR_038167.1	LOC100128973		ILMN_3191831	0003890487	A	181	CCTCTCCACATTTCTGACCCAGTAATCCTAATCTCACTTTATGAGGCAGT	17	+	55605579-55605628	17q23.2a	PREDICTED: Homo sapiens misc_RNA (LOC100128973), miscRNA.					
Homo sapiens	Unigene	Hs.539508	ILMN_104562	HS.539508	Hs.539508		Hs.539508		3838352	AI242955			ILMN_1911457	0001260349	S	200	GGCCAGGCATGGGTCTTTCCAATCTTAGCTGGGCAAACAAGGTGGGGGTG	12	+	7157253-7157302		qh54g06.x1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:1848538 3, mRNA sequence					
Homo sapiens	RefSeq	NM_013341.3	ILMN_178120	OLA1	NM_013341.3	NM_013341.3		29789	58761499	NM_013341.3	OLA1	NP_037473.3	ILMN_1709075	0000150414	I	234	TGGAAGATTTGGAACCTCACTGAAAATTGGTATTGTTGGATTGCCAAATG	2	-	175111446-175111495	2q31.1f	Homo sapiens Obg-like ATPase 1 (OLA1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [pmid 17430889] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 17430889] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PTD004; DKFZp313H1942; GTPBP9	PTD004; DKFZp313H1942; GTPBP9
Homo sapiens	RefSeq	NM_013341.3	ILMN_178120	OLA1	NM_013341.3	NM_013341.3		29789	58761499	NM_013341.3	OLA1	NP_037473.3	ILMN_1659820	0004830021	A	3922	GCAGAGCCGGATCTCCCAAGGAAGCACAAATAGTTTTTGTCGCTAACTTA	2	-	174937559-174937608	2q31.1f	Homo sapiens Obg-like ATPase 1 (OLA1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [pmid 17430889] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 17430889] [evidence IDA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PTD004; DKFZp313H1942; GTPBP9	PTD004; DKFZp313H1942; GTPBP9
Homo sapiens	RefSeq	NM_022759.1	ILMN_20558	FLJ21865	NM_022759.1	NM_022759.1		64772	12232428	NM_022759.1	FLJ21865	NP_073596.1	ILMN_1815366	0000430390	S	2410	TTGTGGGGGGCGCAGCATCCACGCCTTGCTGCCCTTCTTTCATGAAGTCT	17	+	74595958-74596007	17q25.3c	Homo sapiens endo-beta-N-acetylglucosaminidase (FLJ21865), mRNA.				DKFZp434P174	DKFZp434P174
Homo sapiens	RefSeq	NM_001520.1	ILMN_29638	GTF3C1	NM_001520.2	NM_001520.2		2975	101943239	NM_001520.2	GTF3C1	NP_001511.2	ILMN_1789839	0002750296	S	6604	ACTGGCCTCATCACACTGGGAGTTGGTGCTTCTTGTCTCTGGGTCTCCAG	16	-	27379888-27379937	16p12.1a	Homo sapiens general transcription factor IIIC, polypeptide 1, alpha 220kDa (GTF3C1), mRNA.	A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species [goid 127] [pmid 17409385] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of 5S ribosomal RNA (rRNA), or an equivalent rRNA, from a DNA template [goid 42791] [pmid 17409385] [evidence IC ]; The synthesis of transfer RNA (tRNA) from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III promoter [goid 42797] [pmid 17409385] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 17409385] [evidence IC ]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 17409385] [evidence IC ]	TFIIIC220; TFIIIC; DKFZp686A111; TFIIICalpha	TFIIIC220; TFIIIC; DKFZp686A111; TFIIICalpha
Homo sapiens	RefSeq	NM_152375.1	ILMN_5383	KLHDC7A	NM_152375.2	NM_152375.2		127707	116089332	NM_152375.2	KLHDC7A	NP_689588.2	ILMN_1754312	0006060097	S	2729	GCAATCACAATTCTAGGAGCCAGTTGACCCCAGCAGCCCCTCGCTAGTTG	1	+	18682739-18682788	1p36.13c	Homo sapiens kelch domain containing 7A (KLHDC7A), mRNA.				FLJ38753; RP11-422P22.2	FLJ38753; RP11-422P22.2
Homo sapiens	RefSeq	NM_006346.2	ILMN_23420	PIBF1	NM_006346.2	NM_006346.2		10464	55769582	NM_006346.2	PIBF1	NP_006337.2	ILMN_2227473	0000780184	S	2959	GTCCACTACGAGGTACTTCAAAAGCCCAGTAATGGTGGTCAGATACCATG	13	+	72488438-72488487	13q22.1a	Homo sapiens progesterone immunomodulatory binding factor 1 (PIBF1), mRNA.				RP11-505F3.1; KIAA1008; PIBF1; C13orf24	RP11-505F3.1; KIAA1008; PIBF1; C13orf24
Homo sapiens	RefSeq	NM_006346.2	ILMN_23420	PIBF1	NM_006346.2	NM_006346.2		10464	55769582	NM_006346.2	PIBF1	NP_006337.2	ILMN_1758111	0006370707	S	2165	CCAGACTCAACAGCCTTACAGGTATCTCATTGAATCAGTGCGTCAGAGAG	13	+	72437439-72437488	13q22.1a	Homo sapiens progesterone immunomodulatory binding factor 1 (PIBF1), mRNA.				RP11-505F3.1; KIAA1008; PIBF1; C13orf24	RP11-505F3.1; KIAA1008; PIBF1; C13orf24
Homo sapiens	RefSeq	NM_198529.1	ILMN_34807	EFCAB5	NM_198529.2	NM_198529.2		374786	90652854	NM_198529.2	EFCAB5	NP_940931.2	ILMN_1788305	0006380328	I	4239	GGAGTTGGAAGCCAACGTGAAACTAGTGCGTGACATCCTGAAGGCGGTTA	17	+	25443187-25443236	17q11.2b-q11.2c	Homo sapiens EF-hand calcium binding domain 5 (EFCAB5), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp686I0638; FLJ46247; DKFZp434G2420	DKFZp686I0638; DKFZp434G2420
Homo sapiens	RefSeq	NM_001033562.1	ILMN_34807	EFCAB5	NM_198529.2	NM_198529.2		374786	90652854	NM_198529.2	EFCAB5	NP_940931.2	ILMN_1762233	0003130709	A	1990	GGGTCAGTAGCAGAACAAGGATCACGCAGAATGTCAGCTGCAGAACAGGG	17	+	25404959-25405008	17q11.2b-q11.2c	Homo sapiens EF-hand calcium binding domain 5 (EFCAB5), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DKFZp686I0638; FLJ46247; DKFZp434G2420	DKFZp686I0638; FLJ46247; DKFZp434G2420
Homo sapiens	RefSeq	NM_001024593.1	ILMN_9954	ZMYND17	NM_001024593.1	NM_001024593.1		118490	67782302	NM_001024593.1	ZMYND17	NP_001019764.1	ILMN_2120547	0006660025	S	2165	GTGATGCAAGAATGGACAAGTCAGGGAAGTCATTGGGAACATGGATGAGG	10	-	75183545-75183594	10q22.2a	Homo sapiens zinc finger, MYND-type containing 17 (ZMYND17), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ39565	FLJ39565
Homo sapiens	RefSeq	NM_021631.1	ILMN_25706	FKSG2	NM_021631.1	NM_021631.1		59347	11056001	NM_021631.1	FKSG2	NP_067644.1	ILMN_1720928	0001990343	S	441	TCTGCTGAACTACCGTAAGGATGGTCAGTATGACCCCATATATGATTTTT	8	+	36865906-36865955	8p12a	Homo sapiens apoptosis inhibitor (FKSG2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]			
Homo sapiens	RefSeq	NR_003025.1	ILMN_179580	SNORA59A	NR_003025.1	NR_003025.1		677885	93204859	NR_003025.1	SNORA59A		ILMN_3240116	0001090671	S	55	CCTGGGAACATTAACTGCCTCACAACGTTTGTGCCTCAGTTACCCGTAGA	1	+	12567354-12567403		Homo sapiens small nucleolar RNA, H/ACA box 59A (SNORA59A), small nucleolar RNA.				ACA59	ACA59
Homo sapiens	RefSeq	NM_198565.1	ILMN_19500	LRRC33	NM_198565.1	NM_198565.1		375387	38348405	NM_198565.1	LRRC33	NP_940967.1	ILMN_1746148	0005220678	S	2145	GTCATCAAGAGCCGCTGCCACTGGTCCTCCGTTTACTGACCTGGCTGTGT	3	+	196388555-196388593:196388594-196388604	3q29g	Homo sapiens leucine rich repeat containing 33 (LRRC33), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC50789; GARPL1; UNQ3030	MGC50789; GARPL1; UNQ3030
Homo sapiens	RefSeq	NM_003800.1	ILMN_17056	RNGTT	NM_003800.3	NM_003800.3		8732	134142827	NM_003800.3	RNGTT	NP_003791.3	ILMN_1734198	0002630315	S	4330	GGAAAAGGTGTGGATGACTCTACTGCGTGGATGGTTACATTTGCTTTCCG	6	-	89378517-89378566	6q15c	Homo sapiens RNA guanylyltransferase and 5'-phosphatase (RNGTT), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9473487] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9790902] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9512541] [evidence EXP]	Addition of the 7-methylguanosine cap to the 5' end of a nascent messenger RNA transcript [goid 6370] [pmid 9473487] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Catalysis of the reaction: GTP + (5')pp-Pur-mRNA = diphosphate + G(5')ppp-Pur-mRNA; G(5')ppp-Pur-mRNA is mRNA containing a guanosine residue linked 5' through three phosphates to the 5' position of the terminal residue [goid 4484] [pmid 9473487] [evidence TAS]; Catalysis of the reaction: 5'-phosphopolynucleotide + H2O = polynucleotide + phosphate [goid 4651] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	HCE1; hCAP; CAP1A; HCE; DKFZp686J2031	HCE1; hCAP; CAP1A; DKFZp686J2031; HCE
Homo sapiens	RefSeq	NM_024307.1	ILMN_23564	GDPD3	NM_024307.1	NM_024307.1		79153	13236539	NM_024307.1	GDPD3	NP_077283.1	ILMN_1731870	0006510309	I	291	GTGGACTGCATCACAGCAAGGGACGCCATTCACTTCCTAGCTGGGTGACT	16	-	30031744-30031793	16p11.2d	Homo sapiens glycerophosphodiester phosphodiesterase domain containing 3 (GDPD3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate [goid 8889] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ22603; MGC4171	FLJ22603; MGC4171
Homo sapiens	RefSeq	NM_172016.1	ILMN_165050	TRIM39	NM_021253.2	NM_021253.2		56658	25777695	NM_021253.2	TRIM39	NP_067076.2	ILMN_1736562	0006040703	A	3475	CTGAGGGCATTTCAGTTCCTCCTACCACCTCAACAGGACTTTGTCCAGAC	6	+	30419339-30419388	6p21.33b	Homo sapiens tripartite motif-containing 39 (TRIM39), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16189514] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF23; TFP; MGC32984	TRIM39B; RNF23; TFP; MGC32984
Homo sapiens	RefSeq	NM_021253.2	ILMN_165050	TRIM39	NM_021253.2	NM_021253.2		56658	25777695	NM_021253.2	TRIM39	NP_067076.2	ILMN_1730497	0000160240	I	1415	CGGAGGCTCACTCTCAACGATCTGTCCACGGGATCATAAGGCTCTCCTTG	6	+	30416045-30416094	6p21.33b	Homo sapiens tripartite motif-containing 39 (TRIM39), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16189514] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF23; TFP; MGC32984	TRIM39B; RNF23; TFP; MGC32984
Homo sapiens	RefSeq	XM_941828.1	ILMN_44769	LOC652392	XM_941828.1	XM_941828.1		652392	89062737	XM_941828.1	LOC652392	XP_946921.1	ILMN_1772430	0000380288	S	147	CACATCTAATGTCATGTTCACTCAGGATAGAAGGGAACTGCTGTTCCCTG					PREDICTED: Homo sapiens similar to ankyrin repeat domain 36 (LOC652392), mRNA.					
Homo sapiens	RefSeq	XM_927614.1	ILMN_31550	LOC653483	XM_927614.1	XM_927614.1		653483	88998592	XM_927614.1	LOC653483	XP_932707.1	ILMN_1691374	0005860703	S	2516	TGGACTGAAGCTAAACAAACCTGCACTGGGCGAGGTTGAAAAAGACCTTT	6	-	167967119-167967168	6q27d	PREDICTED: Homo sapiens similar to myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 (LOC653483), mRNA.					
Homo sapiens	RefSeq	NM_032116.3	ILMN_18712	KATNAL1	NM_001014380.1	NM_001014380.1		84056	62177111	NM_001014380.1	KATNAL1	NP_001014402.1	ILMN_1722533	0002470600	A	7188	TCATATGATGGTACGGCAGCAGGGAGTGGCCCCCAGTTAACATGGCTGTG	13	-	30777013-30777062	13q12.3c	Homo sapiens katanin p60 subunit A-like 1 (KATNAL1), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP [goid 8568] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC2599	MGC2599
Homo sapiens	RefSeq	NM_001014380.1	ILMN_18712	KATNAL1	NM_001014380.1	NM_001014380.1		84056	62177111	NM_001014380.1	KATNAL1	NP_001014402.1	ILMN_1663234	0001820438	I	14	ATCTCTCTTTGTCTTGAGGGGGCTGTTGAGTGGTCGCGGACCTGGGCTCT	13	-	30881100-30881149	13q12.3c	Homo sapiens katanin p60 subunit A-like 1 (KATNAL1), transcript variant 2, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. Catalysis of the severing of a microtubule at a specific spot along its length, coupled to the hydrolysis of ATP [goid 8568] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC2599	MGC2599
Homo sapiens	RefSeq	NM_002363.3	ILMN_26455	MAGEB1	NM_002363.3	NM_002363.3		4112	29171706	NM_002363.3	MAGEB1	NP_002354.2	ILMN_2297555	0004570414	I	187	CGAGCGAGCTTAAGGAGTGGGGTGCAGCGTCTGGTCAGCCGAGGGTGAAT	X	+	30175437-30175486	Xp21.2a	Homo sapiens melanoma antigen family B, 1 (MAGEB1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]			MAGEL1; MAGE-Xp; MGC9322; DAM10	MAGEL1; MAGE-Xp; MGC9322; DAM10
Homo sapiens	RefSeq	NM_002363.3	ILMN_26455	MAGEB1	NM_002363.3	NM_002363.3		4112	29171706	NM_002363.3	MAGEB1	NP_002354.2	ILMN_2413236	0002900326	A	1001	GGGAGCCTATGATGGAGAGGAGCACTTAATCTATGGGGAACCCCGTAAGT	X	+	30179212-30179261	Xp21.2a	Homo sapiens melanoma antigen family B, 1 (MAGEB1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]			MAGEL1; MAGE-Xp; MGC9322; DAM10	MAGEL1; MAGE-Xp; MGC9322; DAM10
Homo sapiens	RefSeq	NM_002363.3	ILMN_26455	MAGEB1	NM_002363.3	NM_002363.3		4112	29171706	NM_002363.3	MAGEB1	NP_002354.2	ILMN_2413231	0001010524	A	1323	CGTTCTAGAGCCCCATTCAGCAGGTCCTCCCACCCCATGTGAGAACTCAG	X	+	30179534-30179575:30179576-30179583	Xp21.2a	Homo sapiens melanoma antigen family B, 1 (MAGEB1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]			MAGEL1; MAGE-Xp; MGC9322; DAM10	MAGEL1; MAGE-Xp; MGC9322; DAM10
Homo sapiens	RefSeq	NM_003797.2	ILMN_28238	EED	NM_003797.2	NM_003797.2		8726	24041019	NM_003797.2	EED	NP_003788.2	ILMN_2347917	0005490253	A	1423	GTCTTGTGAAAATGCCATTGTGTGCTGGAAACCTGGCAAGATGGAAGATG	11	+	85657251-85657251:85665670-85665718	11q14.2a	Homo sapiens embryonic ectoderm development (EED), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9584199] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 9584199] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 9584199] [evidence NAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11124122] [evidence IPI]	HEED; WAIT1	HEED; WAIT1
Homo sapiens	RefSeq	XM_001723141.1	ILMN_346766	LOC100131261	XM_001723141.1	XM_001723141.1		100131261	169162147	XM_001723141.1	LOC100131261	XP_001723193.1	ILMN_3289262	0004850307	M	2352	CCTCTTTTGATGCCTAAGCAGGTAAGCAGATGCCTAAGCTGTATTTCTCC				1p12c	PREDICTED: Homo sapiens similar to hCG1728885 (LOC100131261), mRNA.					
Homo sapiens	RefSeq	NM_003432.1	ILMN_24428	ZNF131	NM_003432.1	NM_003432.1		7690	84872172	NM_003432.1	ZNF131	NP_003423.1	ILMN_2178088	0002750278	S	1975	CCCCTACTTATTGCCACAGAGGAGGGATCTTTTCCATAACTGAAGGGGAG	5	+	43175126-43175175	5p12c	Homo sapiens zinc finger protein 131 (ZNF131), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7557990] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7557990] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	pHZ-10	pHZ-10
Homo sapiens	Unigene	Hs.242717	ILMN_83038	HS.242717	Hs.242717		Hs.242717		28613347	BX279683			ILMN_1828732	0006220544	S	140	GCCACCGCACCAGGCCCATGTCATATGTTTTTATGAGTTTGGACATTGGC	19	+	2833837-2833886		BX279683 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998E096434 ; IMAGE:2581232, mRNA sequence					
Homo sapiens	RefSeq	NM_018334.3	ILMN_306943	LRRN3	NM_001099660.1	NM_001099660.1		54674	153791506	NM_001099660.1	LRRN3	NP_001093130.1	ILMN_1773650	0002230538	S	2986	GCTGCCTCTCTCCAGAAATGAACTGTGATGGTGGACACAGCTATGTGAGG	7	+	110552004-110552053	7q31.1b	Homo sapiens leucine rich repeat neuronal 3 (LRRN3), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NLRR-3; NLRR3; FLJ11129; FIGLER5	NLRR-3; NLRR3; FLJ11129
Homo sapiens	RefSeq	NM_016032.2	ILMN_176685	ZDHHC9	NM_016032.2	NM_016032.2		51114	56682971	NM_016032.2	ZDHHC9	NP_057116.2	ILMN_1748803	0004900292	I	121	ACCTTTGGCTGCCGACGTGATTCCCTGGGACGGTCCGTTTCCTGCCGTCA	X	-	128977703-128977752	Xq25h	Homo sapiens zinc finger, DHHC-type containing 9 (ZDHHC9), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF379; CGI-89; ZDHHC10; ZNF380; DHHC9; CXorf11	ZNF379; CGI-89; ZDHHC10; ZNF380; DHHC9; CXorf11
Homo sapiens	RefSeq	NM_031416.1	ILMN_15902	C18ORF2	NM_031416.1	NM_031416.1		56651	13899222	NM_031416.1	C18orf2	NP_113604.1	ILMN_1722133	0000520653	S	885	GGCTAAATCTGATCCTCAGCCCACTCTCAGAATCGATAAATGCCCCTAGG	18	-	1244783-1244832	18p11.32b	Homo sapiens chromosome 18 open reading frame 2 (C18orf2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	XM_929488.1	ILMN_41691	LOC646554	XM_929488.1	XM_929488.1		646554	88942562	XM_929488.1	LOC646554	XP_934581.1	ILMN_1656187	0002360180	S	347	GACCCTCAGAGATGGGCGAAGCCTGGGGAATTACAGACTGCCAGAAGTAG	1	+	27025414-27025463		PREDICTED: Homo sapiens similar to microtubule associated serine/threonine kinase 2 (LOC646554), mRNA.					
Homo sapiens	RefSeq	NM_182728.1	ILMN_22403	SLC7A8	NM_182728.1	NM_182728.1		23428	33286429	NM_182728.1	SLC7A8	NP_877392.1	ILMN_1747397	0002490646	I	94	AGCTGGCCAGAGCGTGGCAGAAGGCAGAGAAGTGAACGCCCCAGCAAAAG	14	-	23612413-23612413:23623468-23623516	14q11.2f	Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 (SLC7A8), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10391915] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10391915] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 10391915] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 10391915] [evidence TAS]; The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells [goid 15804] [evidence ISS]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IEA]	Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [pmid 10391915] [evidence TAS]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IEA]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence ISS]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IEA]	LPI-PC1; LAT2	LPI-PC1; LAT2
Homo sapiens	RefSeq	NM_012244.2	ILMN_22403	SLC7A8	NM_182728.1	NM_182728.1		23428	33286429	NM_182728.1	SLC7A8	NP_877392.1	ILMN_1807894	0004860537	A	2788	TTGGTCTGAGTTGTGACCCCTTCAGAGTAGATGCCCGGCAGGCTGGGGTT	14	-	23594791-23594840	14q11.2f	Homo sapiens solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 (SLC7A8), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10391915] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10391915] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 10391915] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 10391915] [evidence TAS]; The directed movement of neutral amino acids, amino acids with no net charge, into, out of, within or between cells [goid 15804] [evidence ISS]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of levorotatory isomer amino acids into, out of, within or between cells [goid 15807] [evidence IEA]	Catalysis of the transfer of neutral amino acids from one side of a membrane to the other. Neutral amino acids have a pH of 7 [goid 15175] [pmid 10391915] [evidence TAS]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IEA]; Interacting selectively with an antigen peptide, a fragment of a foreign protein derived by proteolysis within the cell [goid 42605] [evidence ISS]; Catalysis of the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the levorotatory isomer of amino acids [goid 15179] [evidence IEA]	LPI-PC1; LAT2	LPI-PC1; LAT2
Homo sapiens	RefSeq	NR_003929.2	ILMN_364999	LOC728448	NR_003929.2	NR_003929.2		728448	194239657	NR_003929.2	LOC728448		ILMN_3241378	0007330291	S	2358	TCAAAAGGGCAGGACCAGCACCCTCTTCTACGGAGGAAGGAACGGGCACA	1	-	39994730-39994779	1p34.2d	Homo sapiens peptidylprolyl isomerase E pseudogene (LOC728448), non-coding RNA.					
Homo sapiens	RefSeq	NM_203309.1	ILMN_3348	HEATR4	NM_203309.1	NM_203309.1		399671	42558269	NM_203309.1	HEATR4	NP_976054.1	ILMN_1765198	0003520162	S	3217	CCCCCGAGAAAAGGATTGCTGTGGGACCATTTAGATCCGACTACCCAGCT	14	-	73945394-73945443	14q24.3a	Homo sapiens HEAT repeat containing 4 (HEATR4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC48595	MGC48595
Homo sapiens	Unigene	Hs.556082	ILMN_112484	HS.556082	Hs.556082		Hs.556082		19116194	BC017440			ILMN_1859908	0005810598	S	1392	CCTGGGCCTTTGCTGACATACCAGCCCCAGACTACTTAAATTCAGCtttt	16	+	87456497-87456546		Homo sapiens cDNA clone MGC:13035 IMAGE:3613409, complete cds					
Homo sapiens	RefSeq	NM_001005207.1	ILMN_11439	TRIM37	NM_001005207.1	NM_001005207.1		4591	52487175	NM_001005207.1	TRIM37	NP_001005207.1	ILMN_1671513	0000830291	I	3486	ACTTCAAAATCAAGAGAAAACAAATACTGAAAGTCTCTACTTACATCCAA	17	-	54414827-54414876	17q22d	Homo sapiens tripartite motif-containing 37 (TRIM37), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	TEF3; POB1; KIAA0898; MUL	TEF3; POB1; KIAA0898; MUL
Homo sapiens	RefSeq	NM_001005207.1	ILMN_11439	TRIM37	NM_001005207.1	NM_001005207.1		4591	52487175	NM_001005207.1	TRIM37	NP_001005207.1	ILMN_1711327	0004640348	A	3149	GCAGGAAGAGCATACCAGTGTGGGCGGGTTTCACGACTCCTTCATGGTCA	17	-	54433761-54433810	17q22d	Homo sapiens tripartite motif-containing 37 (TRIM37), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	TEF3; POB1; KIAA0898; MUL	TEF3; POB1; KIAA0898; MUL
Homo sapiens	RefSeq	NR_015382.1	ILMN_337144	LOC678655	NR_015382.1	NR_015382.1		678655	168823574	NR_015382.1	LOC678655		ILMN_3237319	0007320484	S	1908	CTGATTGTAGCCTGGTGAGGCCTGTTTTAGACTTCTGACCTGTAGAGCTG	12	-	6548573-6548622		Homo sapiens hypothetical locus LOC678655 (LOC678655), non-coding RNA.					
Homo sapiens	Unigene	Hs.445365	ILMN_92985	HS.445365	Hs.445365		Hs.445365		76879670	AB072899			ILMN_1872122	0006250152	S	1580	GTGCACTGGCCACTGTGATGGAACCATTGGGCCAGGAGTGCTTTGAGTTT	10	+	98713231-98713280		Homo sapiens primary neuroblastoma cDNA, clone:Nbla11485					
Homo sapiens	RefSeq	NM_018661.3	ILMN_165573	DEFB103A	NM_018661.3	NM_018661.3		55894	125661057	NM_018661.3	DEFB103A	NP_061131.1	ILMN_2132515	0005270671	S	239	CCTGAAACATGACGAGAGTGTTGTAAAGTGTGGAAATGCCTTCTTAAAGT	8	-	7286451-7286500	8p23.1f	Homo sapiens defensin, beta 103A (DEFB103A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	Any process that activates or increases the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria [goid 6965] [pmid 11085990] [evidence TAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		HBD3; HBD-3; HBP-3; DEFB103; DEFB3; HBP3	HBD3; HBD-3; HBP-3; DEFB103; DEFB3; HBP3
Homo sapiens	RefSeq	NM_032545.2	ILMN_169868	CFC1	NM_032545.2	NM_032545.2		55997	24234758	NM_032545.2	CFC1	NP_115934.1	ILMN_2110094	0007560373	S	960	TTATTGGGTAATAAATATTTTCATGAAAGCGCCTTTGGCTCCAGATCCTT	2	-	131073552-131073552:131350335-131350383	2q21.1c	Homo sapiens cripto, FRL-1, cryptic family 1 (CFC1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [pmid 11062482] [evidence NAS]; A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. The details of gastrulation vary from species to species, but usually result in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm [goid 7369] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	CRYPTIC; MGC133213; HTX2	CRYPTIC; MGC133213; HTX2
Homo sapiens	RefSeq	NM_004452.2	ILMN_26601	ESRRB	NM_004452.2	NM_004452.2		2103	22035686	NM_004452.2	ESRRB	NP_004443.2	ILMN_1707398	0004810142	S	2142	CTCTAGCAGAGTGGGGCGGAAGTCCTGATGGTTGGTGTCCATGAGGTGGA	14	+	76036910-76036959	14q24.3c	Homo sapiens estrogen-related receptor beta (ESRRB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ESRL2; ERRbeta; NR3B2; ERRb; ERRbeta-2; ERR2	ESRL2; ERRbeta; NR3B2; ERRb; ERRbeta-2; ERR2
Homo sapiens	RefSeq	NM_015873.2	ILMN_22360	VILL	NM_015873.3	NM_015873.3		50853	94721267	NM_015873.3	VILL	NP_056957.3	ILMN_1778650	0000630689	S	2483	ACAACTGATGCACCAGGCTGTTGAGGACCTGCCAGAGGGCGTGGACCCTG	3	+	38023135-38023184	3p22.2a	Homo sapiens villin-like (VILL), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9179494] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9179494] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	XM_946036.1	ILMN_40156	LOC652816	XM_946036.1	XM_946036.1		652816	89060541	XM_946036.1	LOC652816	XP_951129.1	ILMN_1695006	0006960762	S	583	CTGGTGTCCAGCCCCAGCTACCAAGGAGAGAGACCCAGGAACCGCCAGTG					PREDICTED: Homo sapiens hypothetical protein LOC652816 (LOC652816), mRNA.					
Homo sapiens	RefSeq	XM_001721589.1	ILMN_342965	LOC645979	XM_001721589.1	XM_001721589.1		645979	169171441	XM_001721589.1	LOC645979	XP_001721641.1	ILMN_3285153	0005420301	M	238	TGTGAAGCTACATTACTGTGTGAGTTGTGCAATTCACAGCAAAGTAGTCA				7q31.32a	PREDICTED: Homo sapiens similar to ribosomal protein S26 (LOC645979), mRNA.					
Homo sapiens	RefSeq	NM_018371.3	ILMN_15052	CSGALNACT1	NM_018371.3	NM_018371.3		55790	40255140	NM_018371.3	CSGALNACT1	NP_060841.3	ILMN_2055523	0004610561	S	3451	CCAGAATCTAGTGGGATGGAAGTTTTTGCTACATGTTATCCACCCCAGGC	8	-	19306323-19306372	8p21.3c	Homo sapiens chondroitin sulfate N-acetylgalactosaminyltransferase 1 (CSGALNACT1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 12163485] [evidence IC ]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 11514575] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 11514575] [evidence NAS]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 11514575] [evidence NAS]; The process by which a cell in a multicellular organism interprets its surroundings [goid 8037] [pmid 11514575] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11514575] [evidence NAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 11514575] [evidence NAS]; The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan [goid 15014] [pmid 11514575] [evidence NAS]; The chemical reactions and pathways involving UDP-N-acetylgalactosamine, a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 19276] [pmid 11514575] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [pmid 11514575] [evidence NAS]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 30206] [pmid 12163485] [evidence IDA]; The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate [goid 30206] [pmid 11514575] [evidence IDA]; The chemical reactions and pathways resulting in the formation of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha1->4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 30210] [pmid 11514575] [evidence NAS]; The chemical reactions and pathways involving UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate [goid 46398] [pmid 11514575] [evidence IDA]; The chemical reactions and pathways resulting in the formation of dermatan sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are dermatan sulfate (chondroitin sulfate B). Dermatan sulfate is a glycosaminoglycan with repeats consisting of beta-(1,4)-linked L-iduronyl-beta-(1,3)-N-acetyl-D-galactosamine 4-sulfate units [goid 50651] [pmid 11788602] [evidence ISS]; The elongation of chondroitin sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of chondroitin sulfate [goid 50653] [pmid 12163485] [evidence IDA]	Catalysis of the reaction: [GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-diphosphoundecaprenol + GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol = [GlcNAc-(1,4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-diphosphoundecaprenol + undecaprenyl diphosphate [goid 8955] [pmid 11514575] [evidence IDA]; Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [pmid 11514575] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [pmid 12163485] [evidence NAS]; Catalysis of the reaction: D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP [goid 47237] [pmid 12163485] [evidence IDA]; Catalysis of the reaction: D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-N-acetyl-1,3-beta-D-galactosaminylproteoglycan + UDP [goid 47238] [pmid 12163485] [evidence IDA]	ChGn; beta4GalNAcT; FLJ11264; CSGalNAcT-1	ChGn; CSGalNAcT-1; beta4GalNAcT; FLJ11264
Homo sapiens	RefSeq	XR_015679.2	ILMN_165683	LOC728873	XR_015679.2	XR_015679.2		728873	169165164	XR_015679.2	LOC728873		ILMN_3298582	0001400626	M	141	CATCGAATCACCGGCATGCCCCACCATGTCAGACGCAGCTGTAGACAGGA	3	+	118228210-118228259	3q13.31c	PREDICTED: Homo sapiens misc_RNA (LOC728873), miscRNA.					
Homo sapiens	RefSeq	NM_017736.3	ILMN_13116	THUMPD1	NM_017736.3	NM_017736.3		55623	62865619	NM_017736.3	THUMPD1	NP_060206.2	ILMN_1702946	0006480600	S	3830	GGACTCGGAAGAAAATTGGCCATATGCCTACAGAGCATACAACTCTGTGG	16	-	20745522-20745571	16p12.2c	Homo sapiens THUMP domain containing 1 (THUMPD1), mRNA.				DKFZp686C1054	DKFZp686C1054
Homo sapiens	RefSeq	XM_936351.1	ILMN_16707	ABCC6	NM_001171.3	NM_001171.3		368	118582252	NM_001171.3	ABCC6	NP_001162.3	ILMN_1725675	0003060279	I	4691	ATCACAGAGCATCAGAGCCGGAAGGACCTAGCAATACACAGGTCTGCCCG	16	-	16151285-16151334	16p13.11a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 6 (ABCC6), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10835642] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8912525] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8912525] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8912525] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8912525] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 8912525] [evidence TAS]	MOATE; EST349056; ARA; PXE1; ABC34; PXE; MLP1; MRP6	
Homo sapiens	RefSeq	NM_001171.2	ILMN_16707	ABCC6	NM_001171.3	NM_001171.3		368	118582252	NM_001171.3	ABCC6	NP_001162.3	ILMN_1778352	0003370332	A	4410	GTGATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGGGCAGGTGGCAGA	16	-	16151566-16151599:16151936-16151951	16p13.11a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 6 (ABCC6), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10835642] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8912525] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8912525] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8912525] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8912525] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 8912525] [evidence TAS]	MOATE; EST349056; ARA; PXE1; ABC34; PXE; MLP1; MRP6	MOATE; EST349056; ARA; ABC34; MLP1; PXE; MRP6
Homo sapiens	RefSeq	NM_001171.2	ILMN_16707	ABCC6	NM_001171.3	NM_001171.3		368	118582252	NM_001171.3	ABCC6	NP_001162.3	ILMN_1801521	0007100390	I	1132	ACATGTACAGGCTCAAGGTGCTGCAGATGAGGTTGCGGTCGGCCATCACT	16	-	16203376-16203425	16p13.11a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 6 (ABCC6), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10835642] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8912525] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8912525] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8912525] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8912525] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 8912525] [evidence TAS]	MOATE; EST349056; ARA; PXE1; ABC34; PXE; MLP1; MRP6	MOATE; EST349056; ARA; ABC34; MLP1; PXE; MRP6
Homo sapiens	RefSeq	XM_936351.1	ILMN_16707	ABCC6	NM_001171.3	NM_001171.3		368	118582252	NM_001171.3	ABCC6	NP_001162.3	ILMN_1725414	0004230093	A	4412	GATGGACTGTGCCCGGGTTCTGGTCATGGACAAGGGGCAGGTGGCAGAGA	16	-	16151564-16151599:16151936-16151949	16p13.11a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 6 (ABCC6), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10835642] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8912525] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 8912525] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8912525] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8912525] [evidence TAS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [pmid 8912525] [evidence TAS]	MOATE; EST349056; ARA; PXE1; ABC34; PXE; MLP1; MRP6	
Homo sapiens	RefSeq	NM_001080475.1	ILMN_183967	PLEKHM3	NM_001080475.1	NM_001080475.1		389072	122937346	NM_001080475.1	PLEKHM3	NP_001073944.1	ILMN_2327625	0006760497	A	2171	ATGCAAAGAAAAGTCTGTCCCCTGCCCGAGGTGTGTTCGCCGAGAGCTGC	2	-	208401382-208401431	2q33.3d	Homo sapiens pleckstrin homology domain containing, family M, member 3 (PLEKHM3), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ41210	FLJ41210
Homo sapiens	RefSeq	XR_018613.2	ILMN_179766	LOC345645	XR_018613.2	XR_018613.2		345645	169167919	XR_018613.2	LOC345645		ILMN_3290640	0004570400	M	1398	TGCCCAATGGGTGGCCTTCATCTGTCGGTCACTGTGCAGCACTCTGCTTC				5q11.2e	PREDICTED: Homo sapiens similar to hCG2002932 (LOC345645), mRNA.					
Homo sapiens	RefSeq	NM_018469.3	ILMN_27579	TEX2	NM_018469.3	NM_018469.3		55852	38679908	NM_018469.3	TEX2	NP_060939.3	ILMN_1731181	0002350333	S	4875	TTTCGTTGTGTAGGCCGATCTGCCTGTCAGAGTCCACGTGTCCTGGTCAC	17	-	62224960-62225009	17q23.3b	Homo sapiens testis expressed 2 (TEX2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 16449791] [evidence NAS]	The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 6665] [pmid 16449791] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16449791] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA1738; TMEM96; DKFZp781G0721; HT008	KIAA1738; TMEM96; DKFZp781G0721; HT008
Homo sapiens	RefSeq	NM_001003787.1	ILMN_14209	STRADA	NM_001003787.1	NM_001003787.1		92335	51242954	NM_001003787.1	STRADA	NP_001003787.1	ILMN_2348243	0003140239	A	1727	CCGCAGAAGAGAGATGCTGCTCTGGCCCTGGGAGCTGAATTCCAAGCCCA	17	-	59134369-59134418	17q23.3a-q23.3b	Homo sapiens STE20-related kinase adaptor alpha (STRADA), transcript variant 1, mRNA.				STRAD; FLJ90524; PMSE	STRAD; FLJ90524; PMSE
Homo sapiens	RefSeq	NM_016215.3	ILMN_28438	EGFL7	NM_201446.1	NM_201446.1		51162	41393582	NM_201446.1	EGFL7	NP_958854.1	ILMN_1669898	0003180400	A	1116	TGCTCCTGCAAGAAAGACTCGTGACTGCCCAGCGCCCCAGGCTGGACTGA	9	+	138686361-138686361:138686537-138686559:138686560-138686585	9q34.3d	Homo sapiens EGF-like-domain, multiple 7 (EGFL7), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence ISS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence ISS]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RP11-251M1.2; MGC111117; ZNEU1	RP11-251M1.2; MGC111117; ZNEU1
Homo sapiens	RefSeq	NM_001980.2	ILMN_7501	STX2	NM_001980.2	NM_001980.2		2054	37577286	NM_001980.2	STX2	NP_001971.2	ILMN_2344216	0007400343	A	3097	CACTTGTCCAATGATGTGTATGTCTAAGCCTCATGTACCGATTTGAAGTC	12	-	131274329-131274378	12q24.33b	Homo sapiens syntaxin 2 (STX2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8466509] [evidence TAS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 8466509] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 16339081] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1581962] [evidence TAS]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence ISS]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [pmid 8466509] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 1581962] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [evidence ISS]	MGC51014; STX2C; STX2A; EPM; STX2B; EPIM	MGC51014; STX2C; STX2A; EPM; STX2B; EPIM
Homo sapiens	RefSeq	XM_941268.1	ILMN_309725	KIAA1486	NM_020864.1	NM_020864.1		57624	153792763	NM_020864.1	KIAA1486	NP_065915.1	ILMN_1781890	0004250484	A	1949	CGACTAGGAAGATGCTCTGTGAGCCCCACCTTGTTAGCGGGAAACCACAG	2	+	226200032-226200081	2q36.3a	Homo sapiens KIAA1486 (KIAA1486), mRNA.					
Homo sapiens	RefSeq	XM_940003.1	ILMN_38533	LOC650914	XM_940003.1	XM_940003.1		650914	89061406	XM_940003.1	LOC650914	XP_945096.1	ILMN_1683596	0001430731	S	1019	ACCAGTACCTGTGTACCGCTCTAGGAGCCCTGATCCCACAGGAGCTTGGG					PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a-like (LOC650914), mRNA.					
Homo sapiens	RefSeq	XM_371511.4	ILMN_32504	LOC653663	XM_371511.4	XM_371511.4		653663	88953121	XM_371511.4	LOC653663	XP_371511.3	ILMN_1719149	0004490441	I	2591	GTGTAGGGCAGTGCTTCCTTGGCACTGGGGATATTTCATTGAGCAAAACT	2	+	87819422-87819471		PREDICTED: Homo sapiens similar to anaphase promoting complex subunit 1, transcript variant 1 (LOC653663), mRNA.					
Homo sapiens	RefSeq	NM_005240.1	ILMN_21500	ETV3	NM_005240.1	NM_005240.1		2117	20270187	NM_005240.1	ETV3	NP_005231.1	ILMN_1703180	0004810343	S	1020	CTGGGGTTACTTGACCTTCTCTCCTGTTAAGTGCAGTAGGGCTTCCCCTC	1	-	157103317-157103366	1q23.1b	Homo sapiens ets variant 3 (ETV3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	bA110J1.4; PE-1; PE1; METS	bA110J1.4; PE-1; PE1; METS
Homo sapiens	RefSeq	XM_001716547.1	ILMN_348943	LOC100128598	XM_001716547.1	XM_001716547.1		100128598	169214873	XM_001716547.1	LOC100128598	XP_001716599.1	ILMN_3269154	0003890050	M	948	CCATGCTTACAAAGACAGACTGGACTTAGACCTGGGGTTGGGCAGTGTCC				20q13.13f	PREDICTED: Homo sapiens hypothetical LOC100128598 (LOC100128598), mRNA.					
Homo sapiens	RefSeq	XM_001716547.1	ILMN_348943	LOC100128598	XM_001716547.1	XM_001716547.1		100128598	169214873	XM_001716547.1	LOC100128598	XP_001716599.1	ILMN_3192687	0001820437	A	1008	AGCTGGGCAAGGTGCTGACGGAGAGGTTGACGGCGGTGACGGTCACGAAG				20q13.13f	PREDICTED: Homo sapiens hypothetical LOC100128598 (LOC100128598), mRNA.					
Homo sapiens	RefSeq	XM_939253.1	ILMN_35952	LOC654096	XM_939253.1	XM_939253.1		654096	89058091	XM_939253.1	LOC654096	XP_944346.1	ILMN_1713384	0005050538	S	1240	TAGTATTGGGGTTCTTGTAGCTGTTAAAAATTGTCTGCTCCAATCCAGGG					PREDICTED: Homo sapiens similar to Ovarian cancer-related protein 10-2 (OVC10-2) (LOC654096), mRNA.					
Homo sapiens	RefSeq	XR_039758.1	ILMN_347163	LOC100128023	XR_039758.1	XR_039758.1		100128023	169166046	XR_039758.1	LOC100128023		ILMN_3267024	0000840440	M	1052	GGTTGACCAGTGACACAGCCCCATCTGAAGAGCACCTTTCTGTAAGTCTG				3q29c	PREDICTED: Homo sapiens misc_RNA (LOC100128023), miscRNA.					
Homo sapiens	RefSeq	XM_938551.1	ILMN_45404	LOC649469	XM_938551.1	XM_938551.1		649469	88978938	XM_938551.1	LOC649469	XP_943644.1	ILMN_1770328	0007610010	S	122	CACCCGTCTGTATTGGGAGATCATGGGAACAATATCCCTGGGGGGTGTCC					PREDICTED: Homo sapiens similar to unc-93 homolog B1 (LOC649469), mRNA.					
Homo sapiens	RefSeq	NM_021134.2	ILMN_17506	MRPL23	NM_021134.2	NM_021134.2		6150	27436903	NM_021134.2	MRPL23	NP_066957.2	ILMN_1806123	0004890427	S	314	ATCAAGAAGCCGGACTACAAGGTCGCCTACGTGCAGCTGGCCCATGGACA	11	+	1930623-1930661:1934062-1934072	11p15.5b	Homo sapiens mitochondrial ribosomal protein L23 (MRPL23), nuclear gene encoding mitochondrial protein, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site) [goid 5762] [pmid 8541832] [evidence TAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 8541832] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8541832] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8541832] [evidence TAS]	FLJ45387; L23MRP; RPL23; RPL23L	FLJ45387; L23MRP; RPL23; RPL23L
Homo sapiens	RefSeq	NM_004335.2	ILMN_21302	BST2	NM_004335.2	NM_004335.2		684	7262372	NM_004335.2	BST2	NP_004326.1	ILMN_1723480	0004900674	S	827	GCATGGGGTGCGGTGTGGGGGGCATGTGCTGCCTGTTGTTATGGGTTTTT	19	-	17513817-17513866	19p13.11d	Homo sapiens bone marrow stromal cell antigen 2 (BST2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7607676] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	An immune response mediated through a body fluid [goid 6959] [pmid 7607676] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7607676] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7607676] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 7607676] [evidence TAS]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	CD317	CD317
Homo sapiens	RefSeq	NM_001025071.1	ILMN_10938	RPS14	NM_001025071.1	NM_001025071.1		6208	68160921	NM_001025071.1	RPS14	NP_001020242.1	ILMN_2338785	0006110356	A	655	CGGATTGAGGATGTCACCCCCATCCCCTCTGACAGCACTCGCAGGAAGGG	5	-	149823873-149823916:149825172-149825177	5q33.1c	Homo sapiens ribosomal protein S14 (RPS14), transcript variant 1, mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 3529092] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 3529092] [evidence NAS]; The aggregation, arrangement and bonding together of constituent RNAs and proteins to form and maintain the small ribosomal subunit [goid 28] [evidence ISS]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule [goid 30490] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [pmid 7867928] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 3529092] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence ISS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	EMTB	EMTB
Homo sapiens	RefSeq	XM_001725669.1	ILMN_336022	LOC100129086	XM_001725669.1	XM_001725669.1		100129086	169204088	XM_001725669.1	LOC100129086	XP_001725721.1	ILMN_3236481	0004760397	S	75	AATCACTATGTCAACAGACACAGGTGTTTCCCTTCCTTCATATGAGGAAG	12	+	51822097-51822103:51822104-51822146	12q13.13e	PREDICTED: Homo sapiens similar to HIG1 domain family, member 1A (LOC100129086), mRNA.					
Homo sapiens	RefSeq	NM_018713.2	ILMN_18981	SLC30A10	NM_018713.2	NM_018713.2		55532	52351207	NM_018713.2	SLC30A10	NP_061183.2	ILMN_1783672	0002490242	A	1957	AGTCTGGGACTGGGGCTCAATAGCTGCGGATACAGTGTTCAAAGAAGTTC	1	-	220088453-220088502	1q41d	Homo sapiens solute carrier family 30, member 10 (SLC30A10), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	ZNT8; DKFZp547M236; ZnT-10; ZNT10	ZNT8; DKFZp547M236; ZnT-10; ZNT10
Homo sapiens	RefSeq	Hs.567051	ILMN_180398	LOC732424	XM_001133455.1	XM_001133455.1		732424	113430848	XM_001133455.1	LOC732424	XP_001133455.1	ILMN_1883024	0004070291	S	274	gatcacccagagtcagcaccacacagccacagtcacagaccacGAAGACC					PREDICTED: Homo sapiens hypothetical protein LOC732424 (LOC732424), mRNA.					
Homo sapiens	RefSeq	NM_001037866.1	ILMN_183276	RGPD6	NM_001037866.1	NM_001037866.1		729540	118197269	NM_001037866.1	RGPD6	NP_001032955.1	ILMN_2165251	0004880309	S	481	CTGCGGGGCTGAGCGGTGCTCGCACGCGTCTCGGGAGCCAGGTTGGCGGC	2	-	111334604-111334653	2q13b	Homo sapiens RANBP2-like and GRIP domain containing 6 (RGPD6), transcript variant 2, mRNA.		The directed movement of substances within a cell [goid 46907] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	RGP7	RGP7
Homo sapiens	RefSeq	NM_001890.1	ILMN_179201	CSN1S1	NM_001890.1	NM_001890.1		1446	4503084	NM_001890.1	CSN1S1	NP_001881.1	ILMN_2317364	0006250669	A	787	GTCTAAATTTCAGTTGTGTCTTGCCATATGGAGGGCACCTAATCAGAGGG	4	+	70812094-70812143	4q13.3a	Homo sapiens casein alpha s1 (CSN1S1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	CSN1; MGC149368; CASA	CSN1; MGC149368; CASA
Homo sapiens	RefSeq	NM_001080391.1	ILMN_176690	SP100	NM_001080391.1	NM_001080391.1		6672	122939207	NM_001080391.1	SP100	NP_001073860.1	ILMN_2390586	0006650541	A	2080	GGAGACCGCGGAGCATCCAAGAACTGGAAGCTAAGTATACGCTGCGGTGG	2	+	231079330-231079379	2q37.1a	Homo sapiens SP100 nuclear antigen (SP100), transcript variant 1, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17332504] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9230084] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 2258622] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 9636147] [evidence IPI]	DKFZp686E07254; FLJ00340; FLJ34579	DKFZp686E07254; FLJ00340; FLJ34579
Homo sapiens	RefSeq	NM_001080391.1	ILMN_176690	SP100	NM_001080391.1	NM_001080391.1		6672	122939207	NM_001080391.1	SP100	NP_001073860.1	ILMN_2284998	0004200240	I	2838	GCTACGCAATGTGCCTGTGGTCCCACTAATCTGTGACTGCTCCTGTGGAA	2	+	231115944-231115993	2q37.1a	Homo sapiens SP100 nuclear antigen (SP100), transcript variant 1, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17332504] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A class of nuclear body; they react against SP100 auto-antibodies (PML, promyelocytic leukemia); cells typically contain 10-30 PML bodies per nucleus; alterations in the localization of PML bodies occurs after viral infection [goid 16605] [pmid 9230084] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 2258622] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 9636147] [evidence IPI]	DKFZp686E07254; FLJ00340; FLJ34579	DKFZp686E07254; FLJ00340; FLJ34579
Homo sapiens	RefSeq	NM_147162.1	ILMN_11999	IL11RA	NM_147162.1	NM_147162.1		3590	22212921	NM_147162.1	IL11RA	NP_671518.1	ILMN_1653459	0007160204	I	1324	CCCGCTGAACCTGTCTGATTCTGGAACTACCTCCCCATACCTCCATCCCC	9	+	34650687-34650736	9p13.3c	Homo sapiens interleukin 11 receptor, alpha (IL11RA), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7670098] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		 [goid 4896] [evidence IEA]	MGC2146	MGC2146
Homo sapiens	Unigene	Hs.193951	ILMN_81234	HS.193951	Hs.193951		Hs.193951		27841143	BX118461			ILMN_1847123	0004250379	S	352	GGTGAGCCAAGGTCATGTGCCTGTGTTCTGACTGCAAGGGGGACCTGCTT	X	-	100076914-100076963		BX118461 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998N0718, mRNA sequence					
Homo sapiens	RefSeq	XM_001714844.1	ILMN_342346	LOC100132884	XM_001714844.1	XM_001714844.1		100132884	169171024	XM_001714844.1	LOC100132884	XP_001714896.1	ILMN_3284463	0006220678	M	94	AAGGAAGCCAGGCAAGTCCTGAATGAAGCAGCAATCAGCAGCGCACTGCA	7	-	148036516-148036565	7q36.1a	PREDICTED: Homo sapiens hypothetical protein LOC100132884 (LOC100132884), mRNA.					
Homo sapiens	RefSeq	NM_015916.3	ILMN_19907	CALHM2	NM_015916.3	NM_015916.3		51063	39725697	NM_015916.3	CALHM2	NP_057000.2	ILMN_1766200	0001440241	S	1602	CTTCTTGGCCAGGGGAAAGGACCACAAGGCAATCTGGGGTGTGGACAGAC	10	-	105196743-105196792	10q24.33a	Homo sapiens calcium homeostasis modulator 2 (CALHM2), mRNA.					
Homo sapiens	RefSeq	NM_198534.1	ILMN_16641	C19ORF45	NM_198534.1	NM_198534.1		374877	40254803	NM_198534.1	C19orf45	NP_940936.1	ILMN_1755335	0006020433	S	1412	GGAGCCCCCTCTGGGTGGACTGCGCTTCTTCTCAACACAATACAAGGACG	19	+	7479109-7479158	19p13.2e	Homo sapiens chromosome 19 open reading frame 45 (C19orf45), mRNA.				FLJ35784	FLJ35784
Homo sapiens	RefSeq	NM_006603.3	ILMN_166444	STAG2	NM_001042750.1	NM_001042750.1		10735	112789527	NM_001042750.1	STAG2	NP_001036215.1	ILMN_1782609	0000620180	S	5374	GTGGCTACTTGCCATTTTGACATCAACTCATTTTGCGAGGCTTAGGCAGC	X	+	123063382-123063431	Xq25b-q25c	Homo sapiens stromal antigen 2 (STAG2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9305759] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 9305759] [evidence ND ]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15855230] [evidence IPI]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DKFZp686P168; DKFZp781H1753; SA-2; bA517O1.1; FLJ25871; SA2	DKFZp686P168; DKFZp781H1753; SA-2; bA517O1.1; SA2
Homo sapiens	RefSeq	NM_002664.1	ILMN_5756	PLEK	NM_002664.1	NM_002664.1		5341	4505878	NM_002664.1	PLEK	NP_002655.1	ILMN_1795762	0004810020	S	2532	GCCCTCCCTCAATTCCCCTGTAACATTCCTGAAGCTGTTCCCACTCCCAG	2	+	68477871-68477920	2p14a	Homo sapiens pleckstrin (PLEK), mRNA.		A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 2897630] [evidence TAS]	P47; FLJ27168	P47; FLJ27168
Homo sapiens	RefSeq	XM_001716245.1	ILMN_336809	LOC731957	XM_001716245.1	XM_001716245.1		731957	169215638	XM_001716245.1	LOC731957	XP_001716297.1	ILMN_3237231	0006380632	S	372	GGCCATGGGAGTCTTTGCTTGCAGGGTGCCTGGGAATTACTACTCCAGCT	22	+	31863232-31863281	22q12.3a-q12.3b	PREDICTED: Homo sapiens similar to alpha 1 type VIII collagen (LOC731957), mRNA.					
Homo sapiens	RefSeq	NM_003992.1	ILMN_1044	CLK3	NM_003992.2	NM_003992.2		1198	153791371	NM_003992.2	CLK3	NP_003983.2	ILMN_1695961	0002970685	I	465	AAGATGACAAGGAGGGTCACCTGGTGTGCCGGATCGGCGATTGGCTCCAA	15	+	72701554-72701603	15q24.1b	Homo sapiens CDC-like kinase 3 (CLK3), transcript variant phclk3, mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 7990150] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ22858	FLJ22858
Homo sapiens	RefSeq	XM_940657.1	ILMN_138514	OPRL1	XM_940657.1	XM_940657.1		4987	89058108	XM_940657.1	OPRL1	XP_945750.1	ILMN_1741689	0006220463	I	756	TGGGAACTCTGATGTTAAGGGACTCAGGGCCACTGTAGCTTGTGGTGGCC				20q13.33e	PREDICTED: Homo sapiens opiate receptor-like 1 (OPRL1), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8137918] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by inhibition of adenylyl cyclase and a subsequent decrease in the concentration of cyclic AMP [goid 7193] [pmid 10965058] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10571060] [evidence IGI]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [pmid 7566152] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15051] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 15051] [evidence IEA]		
Homo sapiens	RefSeq	NM_021008.2	ILMN_28153	DEAF1	NM_021008.2	NM_021008.2		10522	38016944	NM_021008.2	DEAF1	NP_066288.2	ILMN_1704045	0006370348	I	320	GTCAGGACAGTGAGGAGAGCAGGGGCCGAGTCTCTCGGAAGCCCTCGTGA	11	-	695371-695420	11p15.5d	Homo sapiens deformed epidermal autoregulatory factor 1 (Drosophila) (DEAF1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9773984] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9773984] [evidence TAS]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [pmid 9773984] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9773984] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	SPN; ZMYND5; NUDR	SPN; ZMYND5; NUDR
Homo sapiens	RefSeq	NM_021008.2	ILMN_28153	DEAF1	NM_021008.2	NM_021008.2		10522	38016944	NM_021008.2	DEAF1	NP_066288.2	ILMN_2387784	0000510093	A	2026	CTGGAGCTGTCAGAGCCGCGGAGCTGGCTGTACCTAGAAGAGATGGTCAA	11	-	685162-685211	11p15.5d	Homo sapiens deformed epidermal autoregulatory factor 1 (Drosophila) (DEAF1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9773984] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9773984] [evidence TAS]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [pmid 9773984] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9773984] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	SPN; ZMYND5; NUDR	SPN; ZMYND5; NUDR
Homo sapiens	RefSeq	NM_194441.1	ILMN_137889	BTN3A1	NM_194441.1	NM_194441.1		11119	37221188	NM_194441.1	BTN3A1	NP_919423.1	ILMN_1687888	0002120184	A	960	GGCATGGAGCACAATGAAGCAAGAACAAAGCACAAGAGTGAAGCTCCTGG	6	+	26517903-26517940:26518101-26518112	6p22.1d	Homo sapiens butyrophilin, subfamily 3, member A1 (BTN3A1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9149941] [evidence TAS]		BT3.1; BTF5	BT3.1; BTF5
Homo sapiens	RefSeq	NR_002144.1	ILMN_13028	LOC407835	NR_002144.1	NR_002144.1		407835	47174756	NR_002144.1	LOC407835		ILMN_1688124	0000730743	S	1342	CGCCTTCATCAAGCGGTCCGAGGTGAAAGAAGCGGATTTTGCCTGCTAGT	7	+	128554902-128554951	7q32.1a	Homo sapiens mitogen-activated protein kinase kinase 2 pseudogene (LOC407835), non-coding RNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NR_002144.1	ILMN_13028	LOC407835	NR_002144.1	NR_002144.1		407835	47174756	NR_002144.1	LOC407835		ILMN_2198893	0000730195	S	1219	TGTGAAAGAGCCGCCTCCTAAGCTGCCCAACGGTGTGTTCACCCCCGACT	7	+	128554779-128554828	7q32.1a	Homo sapiens mitogen-activated protein kinase kinase 2 pseudogene (LOC407835), non-coding RNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_020773.1	ILMN_165668	TBC1D14	NM_020773.1	NM_020773.1		57533	29789113	NM_020773.1	TBC1D14	NP_065824.1	ILMN_1779886	0007160707	S	4578	CTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTCACAG	4	+	7085392-7085441	4p16.1e	Homo sapiens TBC1 domain family, member 14 (TBC1D14), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	FLJ32400; KIAA1322	KIAA1322
Homo sapiens	Unigene	Hs.147255	ILMN_78460	HS.147255	Hs.147255		Hs.147255		27832431	BX103599			ILMN_1828747	0006110349	S	134	GACTGGCTATAAGGTGTTGGACTACAGGGGAAGAGTTATGGTGTCCAGCG					BX103599 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGp998O184766, mRNA sequence					
Homo sapiens	Unigene	Hs.382212	ILMN_88941	HS.382212	Hs.382212		Hs.382212		82361913	DA825516			ILMN_1836182	0006060093	S	370	CTGGAGGATTCTGGAGTTTATTTCTGTGCCAGCAGCCATTGCCCCGGGAC	7	+	141976927-141976960:142204937-142204952		DA825516 PERIC2 Homo sapiens cDNA clone PERIC2006629 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001010852.2	ILMN_3513	CLVS2	NM_001010852.2	NM_001010852.2		134829	71896666	NM_001010852.2	CLVS2	NP_001010852.2	ILMN_1804788	0002320671	S	1712	CAGCATGCCTGTGAAGGAAGTAGAGAAGGAACTCTCCCCAAAGTCCATGA	6	+	123359559-123359590:123360063-123360080	6q22.31d	Homo sapiens clavesin 2 (CLVS2), mRNA.				C6orf213; C6orf212; bA160A10.4; MGC120572	C6orf213; C6orf212; bA160A10.4; MGC120572
Homo sapiens	RefSeq	NM_207451.1	ILMN_23597	FLJ45121	NM_207451.1	NM_207451.1		400556	46409525	NM_207451.1	FLJ45121	NP_997334.1	ILMN_1808018	0004830209	S	4365	TGACTAGAGGCAGAGCCCGAGTAGAAACAGGTCTGAACGGATGGAACTGC	16	+	87335171-87335220	16q24.3a	Homo sapiens FLJ45121 protein (FLJ45121), mRNA.					
Homo sapiens	RefSeq	XM_940961.1	ILMN_161913	LOC651746	XM_001130634.1	XM_001130634.1		651746	113416471	XM_001130634.1	LOC651746	XP_001130634.1	ILMN_1807203	0003170670	S	1127	ATCCCCCGAAGGGAGAAAACCCGCTCTGCTCCTCTGAAGCGGCGGGAGAA	5	+	10616944-10616993	5p15.2c	PREDICTED: Homo sapiens hypothetical LOC651746 (LOC651746), mRNA.					
Homo sapiens	Unigene	Hs.577771	ILMN_129952	HS.577771	Hs.577771		Hs.577771		78247020	DA156353			ILMN_1838187	0001430021	S	138	GCGGCTCAGTTTGAGGACACTTGTGCGGAACCCTTTCACATCCCCACCCT	12	+	77782041-77782090		DA156353 BRAMY2 Homo sapiens cDNA clone BRAMY2015503 5, mRNA sequence					
Homo sapiens	RefSeq	NM_145288.1	ILMN_7933	ZNF296	NM_145288.1	NM_145288.1		162979	21687251	NM_145288.1	ZNF296	NP_660331.1	ILMN_1693242	0002970397	S	1515	GTACCGCTGCCAACACCCATTGACCTCCTCGTTTTTGCCCGCCTTCTCCA	19	-	50266619-50266668	19q13.32a	Homo sapiens zinc finger protein 296 (ZNF296), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF296	ZNF296
Homo sapiens	RefSeq	XM_941994.1	ILMN_170472	TMEM132C	XM_044062.11	XM_044062.11		92293	113423553	XM_044062.11	TMEM132C	XP_044062.8	ILMN_1794621	0001240601	A	5041	CTCATGCTCTCCGCAGGGGGGCGCTCACAAAGATGCCAGGGGTGTTTATT	12	+	127758183-127758232	12q24.32c	PREDICTED: Homo sapiens transmembrane protein 132C (TMEM132C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_044062.10	ILMN_170472	TMEM132C	XM_044062.11	XM_044062.11		92293	113423553	XM_044062.11	TMEM132C	XP_044062.8	ILMN_1687823	0004210451	I	1488	AATAGCCAGTTTCAGCAGCCTTTCAGGGACTCAGCCCATCACGTGGCAGG	12	+	127666692-127666741	12q24.32c	PREDICTED: Homo sapiens transmembrane protein 132C (TMEM132C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_379036.3	ILMN_37825	LOC400890	XM_379036.3	XM_379036.3		400890	89058859	XM_379036.3	LOC400890	XP_379036.3	ILMN_1658950	0004540358	S	40	ACCCTCTGCGACCGGAGGACTATGCCCCTACTCCCGGAAGCCCTCGGACA	22	+	19637545-19637574:19641346-19641365		PREDICTED: Homo sapiens hypothetical LOC400890 (LOC400890), mRNA.					
Homo sapiens	RefSeq	NM_005470.2	ILMN_180417	ABI1	NM_005470.2	NM_005470.2		10006	61743941	NM_005470.2	ABI1	NP_005461.2	ILMN_1739081	0003520706	I	991	ACATTTCTGTCCCTCCTCCTTCTGGAGCTCCACCAGCACCACCTCTGGCA	10	-	27106040-27106089	10p12.1b	Homo sapiens abl-interactor 1 (ABI1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 17101133] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9010225] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9593709] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9010225] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 17101133] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 9010225] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9010225] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [pmid 17101133] [evidence IDA]	Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [pmid 9593709] [evidence TAS]	SSH3BP1; SSH3BP; E3B1; ABI-1; NAP1BP	SSH3BP1; SSH3BP; E3B1; ABI-1; NAP1BP
Homo sapiens	RefSeq	NM_198515.1	ILMN_27863	C10ORF96	NM_198515.1	NM_198515.1		374355	38348343	NM_198515.1	C10orf96	NP_940917.1	ILMN_1702584	0002810047	S	1471	ACCATTCTTCTTGGTACTGTCCTTGAGTTCTCCTGAGAGCTAGTTGTTTA	10	+	118129303-118129352	10q25.3b	Homo sapiens chromosome 10 open reading frame 96 (C10orf96), mRNA.				MGC35062	MGC35062
Homo sapiens	RefSeq	XM_938847.1	ILMN_308101	LOC402694	NM_001089590.1	NM_001089590.1		402694	147905299	NM_001089590.1	LOC402694	NP_001083059.1	ILMN_1738356	0002650026	A	552	TGATGGTTCTTGCTGGGCAGCTTGGAGAAGGCGTGATACTCTCCAGCTCC	7	+	134995878-134995927	7q33c	Homo sapiens similar to ribosomal protein L15 (LOC402694), mRNA.					
Homo sapiens	RefSeq	NM_005953.2	ILMN_11198	MT2A	NM_005953.2	NM_005953.2		4502	31543214	NM_005953.2	MT2A	NP_005944.1	ILMN_1686664	0000450615	S	10	GAACCCGCGTGCAACCTGTCCCGACTCTAGCCGCCTCTTCAGCACGCCAT	16	+	55200021-55200068:55200069-55200070	16q13b	Homo sapiens metallothionein 2A (MT2A), mRNA.		The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [pmid 6719135] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15541360] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12970870] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14550308] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MT2	MT2
Homo sapiens	RefSeq	NM_199227.1	ILMN_19115	MAP1D	NM_199227.1	NM_199227.1		254042	40385866	NM_199227.1	MAP1D	NP_954697.1	ILMN_1740294	0007040092	S	1206	GCGTTTGGAAGAACGCGGGGGAGACTGAAGAGCAACTGGGAACTCGGATC	2	+	172653505-172653554	2q31.1d	Homo sapiens methionine aminopeptidase 1D (MAP1D), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 14532271] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The modification of peptidyl-methionine [goid 18206] [pmid 14532271] [evidence TAS]; The alteration of the N-terminal amino acid residue in a protein [goid 31365] [pmid 14532271] [evidence TAS]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 14532271] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8235] [pmid 14532271] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a cobalt (Co) ion [goid 50897] [evidence IEA]		
Homo sapiens	RefSeq	XM_930513.1	ILMN_42923	LOC440456	XM_930513.1	XM_930513.1		440456	89041687	XM_930513.1	LOC440456	XP_935606.1	ILMN_1740112	0002510309	I	3963	AGGGGCGCCGGCAGATTTACGGAGGCCCCCACACCAAGGCCCTTGGACTA	17	-	60206218-60206249:60206561-60206578	17q24.1a	PREDICTED: Homo sapiens similar to pleckstrin homology domain containing, family M (with RUN domain) member 1; adapter protein 162, transcript variant 2 (LOC440456), mRNA.					
Homo sapiens	RefSeq	NM_000499.2	ILMN_175467	CYP1A1	NM_000499.2	NM_000499.2		1543	13325053	NM_000499.2	CYP1A1	NP_000490.1	ILMN_1807291	0002940332	S	2292	CTGGGGACTTGTGTCTGCGGGGATCCAGAGCGCACAGGGAGTGCACATAT	15	-	72799202-72799251	15q24.1b	Homo sapiens cytochrome P450, family 1, subfamily A, polypeptide 1 (CYP1A1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor [goid 16712] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [pmid 1691986] [evidence TAS]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]	CP11; P1-450; P450-C; P450DX; CYP1; AHRR; AHH	CP11; P1-450; P450-C; P450DX; CYP1; AHRR; AHH
Homo sapiens	RefSeq	NM_022487.2	ILMN_28391	DCLRE1C	NM_022487.2	NM_022487.2		64421	76496494	NM_022487.2	DCLRE1C	NP_071932.2	ILMN_2321931	0006860647	A	3437	TCCAGCCTGGGCAACACACAGGGAGACCCTGTCTCCACAAAATGTTAGCC	10	-	14989280-14989329	10p13c	Homo sapiens DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) (DCLRE1C), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	SCIDA; DCLREC1C; SNM1C; FLJ36438; RS-SCID; FLJ11360; A-SCID	SCIDA; DCLREC1C; SNM1C; FLJ36438; RS-SCID; FLJ11360; A-SCID
Homo sapiens	RefSeq	NM_005701.2	ILMN_178280	SNUPN	NM_001042588.1	NM_001042588.1		10073	110611150	NM_001042588.1	SNUPN	NP_001036053.1	ILMN_1733932	0001340349	S	1169	CCCAAGTTGAAGGGTTCTTCCCATAGCCCAGACCACCCTGGATGCCTCAT	15	-	75890708-75890757	15q24.2a	Homo sapiens snurportin 1 (SNUPN), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 9670026] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The directed movement of a protein from the cytoplasm to the nucleus [goid 6606] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Interacting selectively with a 7-methylguanosine (m7G) moiety or derivative located at the 5' end of an RNA molecule [goid 339] [pmid 9670026] [evidence TAS]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	RNUT1; Snurportin1; KPNBL	KPNBL
Homo sapiens	RefSeq	XM_941510.1	ILMN_138197	DNAJB5	XM_941510.1	XM_941510.1		25822	89030238	XM_941510.1	DNAJB5	XP_946603.1	ILMN_1724221	0000630008	I	20	GGGTCCTCAGTCTGGCCCAAGGACCAGGGCCTCAGCCTAGCCCCAAGAGT				9p13.3b	PREDICTED: Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 5, transcript variant 2 (DNAJB5), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 10570961] [evidence IEP]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Homo sapiens	RefSeq	NM_001009881.1	ILMN_15367	ZCCHC11	NM_001009882.1	NM_001009882.1		23318	57863249	NM_001009882.1	ZCCHC11	NP_001009882.1	ILMN_1655137	0004260093	A	5187	CCGATGCACAGCAACCAGCCAATCCTGCTGTCTCAAGGGTATCCGTACCT	1	-	52889527-52889576	1p32.3d	Homo sapiens zinc finger, CCHC domain containing 11 (ZCCHC11), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of signaling in response to detection of lipopolysaccharide [goid 31664] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB [goid 32088] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16643855] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PAPD3	PAPD3
Homo sapiens	RefSeq	NM_152574.1	ILMN_7334	TTC39B	NM_152574.1	NM_152574.1		158219	22749190	NM_152574.1	TTC39B	NP_689787.1	ILMN_1769290	0002340477	S	1902	CCCTGGAGTCCAGACTACACTTCAGAATTCAGGCAGCTCTTCACCTCTGG	9	-	15188082-15188130:15189572-15189572	9p22.3b	Homo sapiens tetratricopeptide repeat domain 39B (TTC39B), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ33868	FLJ33868
Homo sapiens	RefSeq	NM_152574.1	ILMN_7334	TTC39B	NM_152574.1	NM_152574.1		158219	22749190	NM_152574.1	TTC39B	NP_689787.1	ILMN_2071429	0004120148	S	1971	GATCAGAACTTGAAGGATGGAATTTTTCCCCAATTAGCATCGGCATCTGC	9	-	15188013-15188062	9p22.3b	Homo sapiens tetratricopeptide repeat domain 39B (TTC39B), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ33868	FLJ33868
Homo sapiens	RefSeq	XM_930231.1	ILMN_164394	LOC647195	XR_019590.1	XR_019590.1		647195	113412541	XR_019590.1	LOC647195		ILMN_1732313	0005090373	S	333	ATGTGGAATCCCAATGCCGGCCAGCCAGGACCAAATCCATATCCCCCCAC				1q31.3d	PREDICTED: Homo sapiens misc_RNA (LOC647195), miscRNA.					
Homo sapiens	RefSeq	NM_021148.1	ILMN_5125	ZNF273	NM_021148.2	NM_021148.2		10793	110349777	NM_021148.2	ZNF273	NP_066971.2	ILMN_1775073	0006040521	S	3283	CTTGTGCATTCAGTGAAGCGTTATTATGCCACAAACTAACCTACCTCACC	7	+	64028348-64028397	7q11.21c	Homo sapiens zinc finger protein 273 (ZNF273), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC12518; HZF9	HZF9; MGC12518
Homo sapiens	RefSeq	NM_021148.2	ILMN_5125	ZNF273	NM_021148.2	NM_021148.2		10793	110349777	NM_021148.2	ZNF273	NP_066971.2	ILMN_2346562	0007570079	A	2728	CCTCAGCCTCCCTAGTAGCTGGGATTACAGGCATGTGCCACACCTGGCTA	7	+	64027793-64027842	7q11.21c	Homo sapiens zinc finger protein 273 (ZNF273), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC12518; HZF9	HZF9; MGC12518
Homo sapiens	RefSeq	XM_944113.1	ILMN_44254	LOC650238	XM_944113.1	XM_944113.1		650238	88957030	XM_944113.1	LOC650238	XP_949206.1	ILMN_1710602	0005390440	S	865	AGTCAGCGGTTCCGAAAGCAAACCTGGCCCGTGCTGAAGGAGGACCCGGT					PREDICTED: Homo sapiens hypothetical LOC650238 (LOC650238), mRNA.					
Homo sapiens	Unigene	Hs.566010	ILMN_118398	HS.566010	Hs.566010		Hs.566010		2806519	AA758656			ILMN_1823013	0006200139	S	135	GTTGTGGGTGGGGTCAACTGTCAACATCAGCAATCAGGCCAGCAGGAATG					ah67d02.s1 Soares_testis_NHT Homo sapiens cDNA clone 1320675 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022307.1	ILMN_5081	ICA1	NM_022307.1	NM_022307.1		3382	12545394	NM_022307.1	ICA1	NP_071682.1	ILMN_1812567	0003780273	I	1775	TACATCCCATTCATGGCTGCTTGCGGTGTCACTGGGCTACCGTGAGATCC	7	-	8119772-8119821	7p21.3e	Homo sapiens islet cell autoantigen 1, 69kDa (ICA1), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 12682071] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8326004] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The lipid bilayer surrounding a secretory granule [goid 30667] [pmid 12682071] [evidence IDA]; The lipid bilayer surrounding a synaptic vesicle [goid 30672] [evidence ISS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	ICAp69; ICA69	ICAp69; ICA69
Homo sapiens	RefSeq	NM_181604.1	ILMN_7164	KRTAP6-2	NM_181604.1	NM_181604.1		337967	31791039	NM_181604.1	KRTAP6-2	NP_853635.1	ILMN_1722755	0005860056	S	25	TACTACGGCGACCATGGCTATGGGTGCTGTGGATACGAAGGCCTAGGCTA	21	-	31971119-31971168	21q22.11a	Homo sapiens keratin associated protein 6-2 (KRTAP6-2), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			KAP6.2	KAP6.2
Homo sapiens	RefSeq	NM_001025202.1	ILMN_5961	LOC442582	NM_001025202.1	NM_001025202.1		442582	68533225	NM_001025202.1	LOC442582	NP_001020373.1	ILMN_1663173	0005050164	S	964	CAGGAACGGTGGCATGGCGTGGGGGAAACTTGGAGTTGGAAGGTGGCTAA	7	-	73936842-73936891	7q11.23c	Homo sapiens STAG3-like (LOC442582), mRNA.				MGC131759	MGC131759
Homo sapiens	RefSeq	NM_014937.2	ILMN_15220	INPP5F	NM_014937.2	NM_014937.2		22876	38327540	NM_014937.2	INPP5F	NP_055752.1	ILMN_1779917	0000780097	I	1984	CATGAAGTTACTACTGCCTGATGATGAGAAGTTCCATGGGGGCTGGGCCC	10	+	121551472-121551521	10q26.11d	Homo sapiens inositol polyphosphate-5-phosphatase F (INPP5F), transcript variant 1, mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	SAC2; hSAC2; FLJ13081; MGC59773; MSTPO47; MSTP007; KIAA0966; MGC131851	SAC2; hSAC2; FLJ13081; MGC59773; MSTPO47; MSTP007; KIAA0966; MGC131851
Homo sapiens	RefSeq	XM_001722693.1	ILMN_333987	LOC728790	XM_001722693.1	XM_001722693.1		728790	169211134	XM_001722693.1	LOC728790	XP_001722745.1	ILMN_3234922	0005270377	S	684	TTCAGGTGGGAACATCCAGTTGCAGGAAAACAAGCTTAACACGCCCCCTG	17	+	118583-118587:121700-121744		PREDICTED: Homo sapiens hypothetical LOC728790 (LOC728790), mRNA.					
Homo sapiens	RefSeq	NM_021828.2	ILMN_44166	HPSE2	NM_021828.3	NM_021828.3		60495	90403585	NM_021828.3	HPSE2	NP_068600.3	ILMN_1732035	0005870370	S	1910	TCTGTTTTCAGACATCCTAGCAACCAGCCCCTGCTGCCCCATCCTGCTGG	10	-	100471476-100471525	10q24.2a-q24.2b	Homo sapiens heparanase 2 (HPSE2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11027606] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the cleavage of heparan sulfate; can degrade both heparan sulfate and heparin glycosaminoglycan chains [goid 30305] [pmid 11027606] [evidence TAS]	HPR2; HPA2; MGC133234	HPR2; HPA2
Homo sapiens	RefSeq	XM_939721.1	ILMN_36442	LOC650632	XM_939721.1	XM_939721.1		650632	89059303	XM_939721.1	LOC650632	XP_944814.1	ILMN_1671066	0002320280	S	241	GTGGAAACATGGGCAGTGGTAGACAGCTCCCCCATGAGCCTAGAGAAGGC					PREDICTED: Homo sapiens hypothetical protein LOC650632 (LOC650632), mRNA.					
Homo sapiens	RefSeq	NM_138437.3	ILMN_8313	GPRASP2	NM_138437.3	NM_138437.3		114928	51702246	NM_138437.3	GPRASP2	NP_612446.1	ILMN_2337618	0007570386	A	1879	GATCCGCGTACTGGGCTGAGGAAAAGTCCAGTTTGGGGGCTGTGGCCAGA	X	+	101857712-101857761	Xq22.1e	Homo sapiens G protein-coupled receptor associated sorting protein 2 (GPRASP2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]	GASP2; FLJ37327; FLJ35662	GASP2; FLJ37327; FLJ35662
Homo sapiens	Unigene	Hs.444913	ILMN_92881	HS.444913	Hs.444913		Hs.444913		51493077	XM_498564			ILMN_1882315	0002680674	S	895	TCCTCACAAGTTTCTCGTTTTCATACGGGAACTGGATGGAATGACTCCCC					PREDICTED: Homo sapiens LOC440143 (LOC440143), mRNA					
Homo sapiens	RefSeq	XR_017293.1	ILMN_172621	LOC646672	XR_017293.1	XR_017293.1		646672	113426002	XR_017293.1	LOC646672		ILMN_3291413	0005080372	M	490	CACAAGGAGATGCGTGGGCTGGCATGTGCAGGCCAAAAGAGCCATGGCCT	16	-	15933148-15933197	16p13.11a	PREDICTED: Homo sapiens misc_RNA (LOC646672), miscRNA.					
Homo sapiens	RefSeq	NR_029780.1	ILMN_388010	MIR1-1	NR_029780.1	NR_029780.1		406904	262205804	NR_029780.1	MIR1-1		ILMN_3309614	0003800195	S	21	TGCCCATATGGACCTGCTAAGCTATGGAATGTAAAGAAGTATGTATCTCA				20q13.33c	Homo sapiens microRNA 1-1 (MIR1-1), microRNA.					
Homo sapiens	RefSeq	NM_006181.1	ILMN_177513	NTN3	NM_006181.1	NM_006181.1		4917	5453809	NM_006181.1	NTN3	NP_006172.1	ILMN_3241653	0003290538	S	1464	TGTGTTAAGACCCCTATCCCTGGACCCACTGAGGACAGCAGCCCTGTGCA	16	+	2463130-2463136:2463270-2463312	16p13.3d	Homo sapiens netrin 3 (NTN3), mRNA.					
Homo sapiens	RefSeq	NM_006181.1	ILMN_177513	NTN3	NM_006181.1	NM_006181.1		4917	5453809	NM_006181.1	NTN3	NP_006172.1	ILMN_1656040	0001510735	S	1571	AAAGAAGTTCTGCAAGAAGGACTATGCGGTGCAGGTGGCGGTGGGTGCGC	16	+	2463480-2463505:2463758-2463781	16p13.3d	Homo sapiens netrin 3 (NTN3), mRNA.					
Homo sapiens	RefSeq	NM_025063.1	ILMN_22213	C1ORF129	NM_025063.2	NM_025063.2		80133	117956386	NM_025063.2	C1orf129	NP_079339.2	ILMN_1677974	0004390092	S	1867	CGGATGGGGAGAGGTGTGGAGTTAGATCTGGGTTATGGAAGAGTTGTCCC	1	+	169234180-169234229	1q24.3a	Homo sapiens chromosome 1 open reading frame 129 (C1orf129), transcript variant 2, mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ23550	FLJ23550
Homo sapiens	Unigene	Hs.538806	ILMN_104133	HS.538806	Hs.538806		Hs.538806		31443207	CD511489			ILMN_1901903	0001570019	S	231	GATTTCAAGTCCGGGAGTAGAGCCCAAAGTACACATTGTCATCACTGACG	11	+	100683730-100683779		AGENCOURT_14352888 NIH_MGC_187 Homo sapiens cDNA clone IMAGE:30405721 5, mRNA sequence					
Homo sapiens	RefSeq	NM_014450.2	ILMN_18699	SIT1	NM_014450.2	NM_014450.2		27240	40068036	NM_014450.2	SIT1	NP_055265.1	ILMN_1788531	0004280053	S	954	TCTGGAGTTTAACCAGATCCTCCCCACCCCCGCTCCCTCATAGTCTACCC	9	-	35649529-35649578	9p13.3a	Homo sapiens signaling threshold regulating transmembrane adaptor 1 (SIT1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10209036] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11433379] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10209036] [evidence TAS]; Any process that modulates the frequency, rate or extent of T cell activation [goid 50863] [pmid 10209036] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10209036] [evidence IPI]; Interacting selectively with a kinase, any enzyme that catalyzes the transfer of a phosphate group [goid 19900] [pmid 10209036] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 11433379] [evidence TAS]	MGC125909; SIT; MGC125910; RP11-331F9.5; MGC125908	MGC125909; SIT; MGC125910; RP11-331F9.5; MGC125908
Homo sapiens	RefSeq	NM_171827.2	ILMN_26107	CD8A	NM_171827.2	NM_171827.2		925	91807112	NM_171827.2	CD8A	NP_741969.1	ILMN_2353732	0003170128	A	1792	GGAGGCTGAGAGCCCAAACTGCTGTCCCAAACATGCACTTCCTTGCTTAA	2	-	86865488-86865537	2p11.2e	Homo sapiens CD8a molecule (CD8A), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2496167] [evidence NAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 11131152] [evidence NAS]	Any process involved in the carrying out of an immune response by a T cell [goid 2456] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 11131152] [evidence NAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 9830036] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [pmid 2496167] [evidence NAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 9830036] [evidence NAS]; The process whereby a relatively unspecialized T cell acquires specialized features of a cytotoxic T cell [goid 45065] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2470098] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2493728] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 11131152] [evidence NAS]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 11131152] [evidence NAS]	p32; CD8; MAL; Leu2	p32; CD8; MAL; Leu2
Homo sapiens	RefSeq	NM_001768.4	ILMN_26107	CD8A	NM_171827.2	NM_171827.2		925	91807112	NM_171827.2	CD8A	NP_741969.1	ILMN_1768482	0000670369	A	1772	GGCAGACCTGACTCTCTTAAGGAGGCTGAGAGCCCAAACTGCTGTCCCAA	2	-	86865508-86865557	2p11.2e	Homo sapiens CD8a molecule (CD8A), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2496167] [evidence NAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 11131152] [evidence NAS]	Any process involved in the carrying out of an immune response by a T cell [goid 2456] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 11131152] [evidence NAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 9830036] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [pmid 2496167] [evidence NAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 9830036] [evidence NAS]; The process whereby a relatively unspecialized T cell acquires specialized features of a cytotoxic T cell [goid 45065] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2470098] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2493728] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 11131152] [evidence NAS]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 11131152] [evidence NAS]	p32; CD8; MAL; Leu2	p32; CD8; MAL; Leu2
Homo sapiens	RefSeq	NM_014279.2	ILMN_27341	OLFM1	NM_014279.4	NM_014279.4		10439	150456422	NM_014279.4	OLFM1	NP_055094.1	ILMN_1742025	0002680072	I	2741	CTCTGGTTTCCGATGGGACAGGAAAGTCATACGGGCAACAGTATGCGGAA	9	+	137152718-137152767	9q34.3a-q34.3b	Homo sapiens olfactomedin 1 (OLFM1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9039501] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]	AMY; NOELIN1; NOE1; OlfA	AMY; NOELIN1; NOE1; NOELIN1_V1; NOELIN1_V2; NOELIN1_V4; OlfA; NOELIN
Homo sapiens	RefSeq	NM_001077697.1	ILMN_175459	TSPY3	NM_001077697.1	NM_001077697.1		728137	118026928	NM_001077697.1	TSPY3	NP_001071165.1	ILMN_2197750	0002060767	S	265	GAGGAGGGCCTCGTGGAGCGGCGGGAGGAGGCCCAGCGGGCACAGCAGGC	Y	+	9236313-9236362	Yp11.2c	Homo sapiens testis specific protein, Y-linked 3 (TSPY3), mRNA.					
Homo sapiens	RefSeq	NM_000978.2	ILMN_8866	RPL23	NM_000978.3	NM_000978.3		9349	78190459	NM_000978.3	RPL23	NP_000969.1	ILMN_1755115	0000380575	S	321	TCCAGCAGTGGTCATTCGACAACGAAAGTCATACCGTAGAAAAGATGGCG	17	-	37006674-37006723	17q12c	Homo sapiens ribosomal protein L23 (RPL23), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 1874450] [evidence NAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane [goid 6610] [pmid 1874450] [evidence NAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence NAS]	MGC117346; rpL17; MGC111167; MGC72008	MGC117346; rpL17; MGC111167; MGC72008
Homo sapiens	RefSeq	NM_012087.1	ILMN_814	GTF3C5	NM_012087.2	NM_012087.2		9328	142366175	NM_012087.2	GTF3C5	NP_036219.1	ILMN_1723895	0001510438	S	1995	GACCCTAGCACTGGCTGTGACATGCTGCTTGGTGCTGCCTCTGGTCCTGA	9	+	134923337-134923386	9q34.13b-q34.2a	Homo sapiens general transcription factor IIIC, polypeptide 5, 63kDa (GTF3C5), mRNA.	A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species [goid 127] [pmid 17409385] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of RNA on a template of DNA [goid 6351] [pmid 17409385] [evidence IC ]; The synthesis of 5S ribosomal RNA (rRNA), or an equivalent rRNA, from a DNA template [goid 42791] [pmid 17409385] [evidence IC ]; The synthesis of transfer RNA (tRNA) from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III promoter [goid 42797] [pmid 17409385] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 17409385] [evidence IC ]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 17409385] [evidence IC ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17409385] [evidence IPI]	TFIIIC63; FLJ20857; TFIIICepsilon; TFiiiC2-63	TFIIIC63; FLJ20857; TFIIICepsilon; TFiiiC2-63
Homo sapiens	RefSeq	NM_152850.2	ILMN_10422	PIGO	NM_152850.2	NM_152850.2		84720	38045916	NM_152850.2	PIGO	NP_690577.2	ILMN_2379931	0003890196	A	1961	CCTGGGCATAGCTTTGGTGATGAGAGTGGATGGTGCTGTGAGCTCCTGGT	9	-	35089120-35089169	9p13.3b	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class O (PIGO), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	RP11-182N22.4; DKFZp434M222; FLJ00135; MGC3079; MGC20536	RP11-182N22.4; DKFZp434M222; FLJ00135; MGC3079; MGC20536
Homo sapiens	RefSeq	NM_032634.2	ILMN_10422	PIGO	NM_152850.2	NM_152850.2		84720	38045916	NM_152850.2	PIGO	NP_690577.2	ILMN_1653613	0003310451	A	2122	TCTGCAAGACAGGCTCAGCCATACTCTTACTATCATGCAGCCAGGGGCCG	9	-	35088959-35089008	9p13.3b	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class O (PIGO), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The stepwise addition of the components of the GPI anchor on to phosphatidylinositol lipids in the endoplasmic reticulum membrane [goid 16254] [pmid 11102867] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	RP11-182N22.4; DKFZp434M222; FLJ00135; MGC3079; MGC20536	RP11-182N22.4; DKFZp434M222; FLJ00135; MGC3079; MGC20536
Homo sapiens	Unigene	Hs.540712	ILMN_105305	HS.540712	Hs.540712		Hs.540712		3803544	AI221341			ILMN_1826631	0005900719	S	217	AACTGCACTGGGACAGAGAGACAGGGAAGGAGCTAGGGGCAGGAAGGAAC	17	-	77071890-77071939		qg81b10.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1841563 3, mRNA sequence					
Homo sapiens	RefSeq	XM_930899.1	ILMN_163282	LOC727773	XM_001126273.1	XM_001126273.1		727773	113413598	XM_001126273.1	LOC727773	XP_001126273.1	ILMN_1677714	0004860722	A	90	AGAGGAACTTCCAGCTGATGCGAGAGCTGGACCAGAGGACGGAAGATAAG	2	+	121218-121262:125754-125758		PREDICTED: Homo sapiens similar to inhibitor of growth family, member 5, transcript variant 2 (LOC727773), mRNA.					
Homo sapiens	RefSeq	NM_032329.4	ILMN_163282	LOC727773	XM_001126273.1	XM_001126273.1		727773	113413598	XM_001126273.1	LOC727773	XP_001126273.1	ILMN_1655093	0005490435	A	243	GCAAGTGCAAGGAATACAGTGACGACAAAGTGCAGCTGGCCATGCAGACC	2	+	125862-125911		PREDICTED: Homo sapiens similar to inhibitor of growth family, member 5, transcript variant 2 (LOC727773), mRNA.					FLJ23842; p28ING5
Homo sapiens	RefSeq	XM_926052.1	ILMN_163282	LOC727773	XM_001126273.1	XM_001126273.1		727773	113413598	XM_001126273.1	LOC727773	XP_001126273.1	ILMN_1731931	0007330370	I	2901	GCGTCGGCTTCCCAGAGTGCTGGGATTACAGGTGTCAGCCACTGCGCTCA	2	+	143718-143767		PREDICTED: Homo sapiens similar to inhibitor of growth family, member 5, transcript variant 2 (LOC727773), mRNA.					
Homo sapiens	RefSeq	NM_018316.1	ILMN_13360	KLHL26	NM_018316.1	NM_018316.1		55295	8922853	NM_018316.1	KLHL26	NP_060786.1	ILMN_1805330	0000580446	S	2776	GCCCTGCCACTCCCTGGCCTGCCCTGTTTTTGGGTCAACATTGCTACGGA	19	+	18641956-18642005	19p13.11b	Homo sapiens kelch-like 26 (Drosophila) (KLHL26), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ11078	FLJ11078
Homo sapiens	RefSeq	NM_018067.2	ILMN_138852	RPRC1	NM_018067.2	NM_018067.2		55700	21361780	NM_018067.2	RPRC1	NP_060537.2	ILMN_1777906	0002970563	S	2710	GGTACCCATGCCCCCTGCCCTCGCCTGGAATCAGTGTTACTGCATCTGAT	1	+	36418957-36419006	1p34.3d	Homo sapiens arginine/proline rich coiled-coil 1 (RPRC1), mRNA.				PARCC1; FLJ10350	PARCC1; FLJ10350
Homo sapiens	RefSeq	NM_001099414.1	ILMN_307980	HAVCR1	NM_001099414.1	NM_001099414.1		26762	153085428	NM_001099414.1	HAVCR1	NP_001092884.1	ILMN_3253901	0004880692	M	904	CGACACTGCAGGGAGCAATAAGGAGAGAACCCACCAGCTCACCATTGTAC	5	-	156476061-156476110	5q33.3a	Homo sapiens hepatitis A virus cellular receptor 1 (HAVCR1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	TIM1; KIM1; HAVCR; KIM-1; TIMD1; TIM-1; HAVCR-1	TIM1; KIM1; HAVCR; KIM-1; TIMD1; TIM-1; HAVCR-1
Homo sapiens	RefSeq	NM_006708.1	ILMN_3061	GLO1	NM_006708.2	NM_006708.2		2739	118402585	NM_006708.2	GLO1	NP_006699.2	ILMN_1702177	0006770619	S	1537	GTGCTCTTGGCTCTTGGGCTGGAGTACCGTGGTGAGGGAGTAAACACTAG	6	-	38752139-38752188	6p21.2b	Homo sapiens glyoxalase I (GLO1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 7684374] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11489834] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 16130169] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10807791] [evidence IMP]	Catalysis of the reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal [goid 4462] [pmid 11489834] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	GLYI; GLOD1	GLYI
Homo sapiens	RefSeq	NM_001005197.1	ILMN_171638	OR8D4	NM_001005197.1	NM_001005197.1		338662	52353287	NM_001005197.1	OR8D4	NP_001005197.1	ILMN_1773278	0006580563	S	662	TCCTCACCAGCATCCTGCGCATCCACTCTAAAAAGGGCAGGTGCAAAGCG	11	+	123283010-123283059	11q24.1c	Homo sapiens olfactory receptor, family 8, subfamily D, member 4 (OR8D4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-275	OR11-275
Homo sapiens	RefSeq	NM_198474.2	ILMN_1368	OLFML1	NM_198474.2	NM_198474.2		283298	67003564	NM_198474.2	OLFML1	NP_940876.1	ILMN_1776151	0000130390	S	2593	TTCCTCCAGAAAACCAGTCTAAGGGTGAGGACCCCAACTCTAGCCTCCTC	11	+	7489027-7489076	11p15.4b	Homo sapiens olfactomedin-like 1 (OLFML1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			UNQ564	UNQ564
Homo sapiens	RefSeq	NM_003460.1	ILMN_164292	ZP2	NM_003460.1	NM_003460.1		7783	4508044	NM_003460.1	ZP2	NP_003451.1	ILMN_1674519	0006650577	S	2154	TGCTGTGGCTGCCTTTGCAGGTGTGGTGGCAACTCTAGGCTTCATCTACT	16	-	21208835-21208884	16p12.2b	Homo sapiens zona pellucida glycoprotein 2 (sperm receptor) (ZP2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [pmid 8385033] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 8385033] [evidence TAS]; Interacting selectively with acrosin, a protein that is found in the acrosomes of sperm and possesses protease and carbohydrate binding activities [goid 32190] [pmid 15950651] [evidence IPI]	ZPA	ZPA
Homo sapiens	RefSeq	NM_002857.2	ILMN_181669	PEX19	NM_002857.2	NM_002857.2		5824	46358408	NM_002857.2	PEX19	NP_002848.1	ILMN_1658759	0002750025	S	3294	GCAGATCATCTTTGAGTAGCACTGTTTTGGGGCCCTCGGTCTCTCTGAAG	1	-	158513538-158513587	1q23.2d	Homo sapiens peroxisomal biogenesis factor 19 (PEX19), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12924628] [evidence IMP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12924628] [evidence IMP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10051604] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence ISS]; The lipid bilayer surrounding a peroxisome [goid 5778] [pmid 15713480] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [pmid 9339377] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10051604] [evidence IDA]	The process of directing proteins towards the peroxisome using signals contained within the protein [goid 6625] [pmid 10704444] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [pmid 11883941] [evidence IMP]; The assembly and arrangement of the membrane of a peroxisome [goid 16557] [pmid 10051604] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713480] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11883941] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10704444] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11883941] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713480] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11883941] [evidence IPI]	D1S2223E; PXF; PMPI; HK33; PXMP1; PMP1	HK33; PXMP1; D1S2223E; PXF; PMPI; PMP1
Homo sapiens	Unigene	Hs.549668	ILMN_110043	HS.549668	Hs.549668		Hs.549668		6702403	AW295767			ILMN_1888935	0001570132	S	389	GAGGTCCAGAAGAGAGGAGGGAGATGGTGCAAGCGATGGAGCAGATGCAG	6	+	168369982-168370031		UI-H-BI1-afh-a-08-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2721687 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015167.1	ILMN_172725	JMJD6	NM_001081461.1	NM_001081461.1		23210	125988394	NM_001081461.1	JMJD6	NP_001074930.1	ILMN_1666068	0004060477	S	1822	CTGTGCTGTCTCATTGAAAACCGAGCCAGTCAACCACAAGGCTGGCAGGG	17	-	74712465-74712514	17q25.2a	Homo sapiens jumonji domain containing 6 (JMJD6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14729065] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus [goid 33077] [evidence IEA]; A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42116] [evidence IEA]; The process by which a cell interprets signals (in the form of specific proteins and lipids) on the surface of a dying cell which it will engulf and remove by phagocytosis [goid 43654] [evidence IEA]; The process aimed at the progression of an erythrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48821] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The process whose specific outcome is the progression of the retina over time, from its formation to the mature structure. The retina is the innermost layer or coating at the back of the eyeball, which is sensitive to light and in which the optic nerve terminates [goid 60041] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Catalysis of the removal of a methyl group from arginine at position 2 of the histone H3 protein [goid 33746] [pmid 17947579] [evidence IDA]; Catalysis of the removal of a methyl group from arginine at position 3 of the histone H4 protein [goid 33749] [pmid 17947579] [evidence IDA]	PTDSR; PTDSR1; PSR; KIAA0585	PTDSR1; PSR; KIAA0585
Homo sapiens	RefSeq	NM_018962.1	ILMN_164553	DSCR6	NM_018962.1	NM_018962.1		53820	9506556	NM_018962.1	DSCR6	NP_061835.1	ILMN_1709257	0004180475	S	1961	TAGGGAGTAGAACCGTCTCTCTTCTTAGTTGGTGACTGTTTGGGGCCTGG	21	+	37313555-37313604	21q22.13a	Homo sapiens Down syndrome critical region gene 6 (DSCR6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10814524] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	RIPPLY3	RIPPLY3
Homo sapiens	RefSeq	XM_001720362.1	ILMN_335485	LOC100130849	XM_001720362.1	XM_001720362.1		100130849	169172316	XM_001720362.1	LOC100130849	XP_001720414.1	ILMN_3253606	0006900358	M	249	CAGTGGAAGCAGCTTCACCCCCGAGGAGGTGCAGGAGCTGCAAGAAGCCA				7p11.2a	PREDICTED: Homo sapiens similar to hCG2005335 (LOC100130849), mRNA.					
Homo sapiens	RefSeq	NM_205833.1	ILMN_2180	IGSF1	NM_205833.1	NM_205833.1		3547	45505168	NM_205833.1	IGSF1	NP_991402.1	ILMN_1704675	0006200044	I	1479	CCAGCTAAATAGGCTTGGGGAAAGCTGTGGTGCTACAGAAAGTACCCTAG	X	-	130246107-130246156	Xq26.1c	Homo sapiens immunoglobulin superfamily, member 1 (IGSF1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11266516] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 11266516] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 11266516] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11266516] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11266516] [evidence IPI]; Interacting selectively with inhibin beta-A [goid 48186] [pmid 11266516] [evidence IDA]; Interacting selectively with inhibin beta-B [goid 48187] [pmid 11266516] [evidence IDA]	KIAA0364; INHBP; MGC75490; PGSF2; IGCD1; IGDC1	INHBP; MGC75490; PGSF2; KIAA0364; IGCD1; IGDC1
Homo sapiens	Unigene	Hs.362932	ILMN_87520	HS.362932	Hs.362932		Hs.362932		16553688	AK057759			ILMN_1873793	0003310184	S	277	GCCCAAGGAGGCTATTCTCTCACAATCTCTACCCAGCTCCGGGCCTGCAG	5	+	43097516-43097565		Homo sapiens cDNA FLJ25030 fis, clone CBL02631					
Homo sapiens	Unigene	Hs.583591	ILMN_135772	HS.583591	Hs.583591		Hs.583591		83115133	DB382271			ILMN_1819923	0004490435	S	275	AGTCCTAACCCTCAGTGCCTGTTGATGTGAACTTGTTTAGAATTAGGGTC	8	-	134218849-134218898		DB382271 THYRO1 Homo sapiens cDNA clone THYRO1001146 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005401.3	ILMN_27079	PTPN14	NM_005401.3	NM_005401.3		5784	34328898	NM_005401.3	PTPN14	NP_005392.2	ILMN_1750240	0000450653	S	3688	CTGCTTGGAACATAACGAAAAGGTGGAAGTGCCCATGATGCTGAGGCTCC	1	-	214531362-214531393:214537855-214537872	1q41a	Homo sapiens protein tyrosine phosphatase, non-receptor type 14 (PTPN14), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 7733990] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 7733990] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PTP36; PEZ; MGC126803	PTP36; PEZ; MGC126803
Homo sapiens	RefSeq	NM_020784.1	ILMN_21979	TXNDC16	NM_020784.1	NM_020784.1		57544	55741664	NM_020784.1	TXNDC16	NP_065835.1	ILMN_1709740	0007100592	S	3921	AGACAAATCAGTTGATCTCCCTGAGCCACACGGCCTCATTCTGTGAGGGA	14	-	51967640-51967689	14q22.1d	Homo sapiens thioredoxin domain containing 16 (TXNDC16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]		KIAA1344	KIAA1344
Homo sapiens	RefSeq	XR_015819.1	ILMN_166896	LOC729150	XR_015819.1	XR_015819.1		729150	113414629	XR_015819.1	LOC729150		ILMN_3237795	0001110021	S	210	AAATGTTCTAAAATTGACTGGTAATGTTTGTGTATATCTCTGAATATATT	3	+	126996197-126996246	3q21.2c	PREDICTED: Homo sapiens misc_RNA (LOC729150), miscRNA.					
Homo sapiens	RefSeq	XR_039165.1	ILMN_349869	LOC100129391	XR_039165.1	XR_039165.1		100129391	169214150	XR_039165.1	LOC100129391		ILMN_3193687	0004220196	A	369	CACAAAGTTGAACCAGATTGGGCTGAATCTGCGGTTACAATGTTTACCAG				19p13.2e	PREDICTED: Homo sapiens misc_RNA (LOC100129391), miscRNA.					
Homo sapiens	RefSeq	XM_933864.1	ILMN_45887	LOC23117	XM_933864.1	XM_933864.1		23117	89040035	XM_933864.1	LOC23117	XP_938957.1	ILMN_1709326	0002320441	I	8090	TCAACCACATCCTTCAAAAGGACTATGCCTGTTTATAAGCCCAGCTGTTT	16	-	21758778-21758790:21758791-21758827	16p12.2a	PREDICTED: Homo sapiens KIAA0220-like protein, transcript variant 24 (LOC23117), mRNA.					
Homo sapiens	RefSeq	XM_936514.1	ILMN_45469	LOC647448	XM_936514.1	XM_936514.1		647448	88944446	XM_936514.1	LOC647448	XP_941607.1	ILMN_1758168	0000610673	S	150	TCTGACCGGAAGCTGGCTGCAGACCCTGCGGAGGCACGTCCAGATGGACT					PREDICTED: Homo sapiens similar to Ankyrin-1 (Erythrocyte ankyrin) (LOC647448), mRNA.					
Homo sapiens	RefSeq	NM_004591.1	ILMN_1789	CCL20	NM_004591.1	NM_004591.1		6364	4759075	NM_004591.1	CCL20	NP_004582.1	ILMN_1657234	0004220246	S	402	CCTTGCTGGGGTTGGAGGTTTCACTTGCACATCATGGAGGGTTTAGTGCT	2	+	228390096-228390145	2q36.3c	Homo sapiens chemokine (C-C motif) ligand 20 (CCL20), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9038201] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10438902] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9129037] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10521347] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9038201] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9038201] [evidence TAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10438902] [evidence TAS]	SCYA20; MIP-3a; MIP3A; CKb4; LARC; ST38	SCYA20; MIP-3a; MIP3A; CKb4; LARC; ST38
Homo sapiens	Unigene	Hs.40289	ILMN_72552	HS.40289	Hs.40289		Hs.40289		31874834	BX538337			ILMN_1869087	0001940082	S	2810	CCTTTGAGGAGAAAGTCAAAATGTGTTGTTAGCCTACCTCCACTCAGGCC	4	-	55989141-55989190		Homo sapiens mRNA; cDNA DKFZp686I23208 (from clone DKFZp686I23208)					
Homo sapiens	RefSeq	Hs.580580	ILMN_173612	LOC729254	XM_001129762.1	XM_001129762.1		729254	113413394	XM_001129762.1	LOC729254	XP_001129762.1	ILMN_1883255	0000540132	S	209	CTTCTTGTGAAAGTCTTCTGGGACTGCTGGAGAGCCTACTTACATCACGG	2	+	192387372-192387410:192392932-192392942	2q32.3a	PREDICTED: Homo sapiens hCG2045843 (LOC729254), mRNA.					
Homo sapiens	RefSeq	NM_001042453.1	ILMN_176368	MST4	NM_001042453.1	NM_001042453.1		51765	109633027	NM_001042453.1	MST4	NP_001035918.1	ILMN_2328776	0002450152	A	2434	GTGGGTGATGCCTTTTTCTTTTAAGCCCAGTACATATATTATGCCTGCCT	X	+	131036981-131037030	Xq26.2a	Homo sapiens serine/threonine protein kinase MST4 (MST4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IPI]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 11641781] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 11741893] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 11641781] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11641781] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 11741893] [evidence IPI]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MASK	MASK
Homo sapiens	RefSeq	NM_030956.2	ILMN_178291	TLR10	NM_030956.2	NM_030956.2		81793	62865617	NM_030956.2	TLR10	NP_112218.2	ILMN_2414762	0000620441	A	3055	TCCCACAGTCCTTGGGAAGTTGGGGACCACATACACTGTTGGGATGTACA	4	-	38774723-38774772	4p14c	Homo sapiens toll-like receptor 10 (TLR10), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16024789] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15728506] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14625308] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 11267672] [evidence TAS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MGC126399; MGC126398; MGC104967	MGC126399; MGC126398; MGC104967
Homo sapiens	RefSeq	NM_030956.2	ILMN_178291	TLR10	NM_030956.2	NM_030956.2		81793	62865617	NM_030956.2	TLR10	NP_112218.2	ILMN_2298366	0000380639	I	469	CCTCAACAACGGAGACATGGCACAGTAGCCAGCTTGGAGACTTCTCAGCC	4	-	38777431-38777480	4p14c	Homo sapiens toll-like receptor 10 (TLR10), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16024789] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15728506] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14625308] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 11267672] [evidence TAS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MGC126399; MGC126398; MGC104967	MGC126399; MGC126398; MGC104967
Homo sapiens	RefSeq	NM_178009.2	ILMN_16767	DGKH	NM_178009.2	NM_178009.2		160851	32307169	NM_178009.2	DGKH	NP_821077.1	ILMN_1756650	0006760347	I	3471	ATGGGGCACAGAGGAAGTTGCTGCTTGGCTGGATCTGCTCAATTTGGGAG	13	+	41693407-41693456	13q14.11c	Homo sapiens diacylglycerol kinase, eta (DGKH), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp761I1510; DGKeta	DKFZp761I1510; DGKeta
Homo sapiens	RefSeq	NM_152227.1	ILMN_6733	SNX5	NM_152227.1	NM_152227.1		27131	23111046	NM_152227.1	SNX5	NP_689413.1	ILMN_1673676	0000630100	I	53	TCTTTCTCTAGACGCGTCTTGCTGGGAGAGTGTCCGTTGCTTCCCGTCCG	20	-	17949388-17949437	20p11.23d	Homo sapiens sorting nexin 5 (SNX5), transcript variant 1, mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	FLJ10931	FLJ10931
Homo sapiens	RefSeq	XM_930934.1	ILMN_31746	LOC642591	XM_930934.1	XM_930934.1		642591	89030927	XM_930934.1	LOC642591	XP_936027.1	ILMN_1654226	0002510377	S	538	CACACTGGGAGAAATAACGCCCGTAACAGTGCCCCAAGCCCCACTCCATC	10	+	42506822-42506871		PREDICTED: Homo sapiens hypothetical protein LOC642591 (LOC642591), mRNA.					
Homo sapiens	RefSeq	XM_929041.1	ILMN_14104	CACHD1	NM_020925.2	NM_020925.2		57685	110578648	NM_020925.2	CACHD1	NP_065976.2	ILMN_1685201	0003890739	S	221	AAAAAATCCGAGAGAAGTTCAACCGTTACTTGGATGTGGTCAATCGGAAC	1	+	64820434-64820483	1p31.3c-p31.3b	Homo sapiens cache domain containing 1 (CACHD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA1573; RP4-655E10.1	
Homo sapiens	RefSeq	NM_020925.1	ILMN_14104	CACHD1	NM_020925.2	NM_020925.2		57685	110578648	NM_020925.2	CACHD1	NP_065976.2	ILMN_1738854	0001780482	S	4869	CACGGTTAAAAGCTGCTGCCAGTTAGCCAAGACATTATCCACCAAATTGC	1	+	64930924-64930973	1p31.3c-p31.3b	Homo sapiens cache domain containing 1 (CACHD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA1573; RP4-655E10.1	KIAA1573; RP4-655E10.1
Homo sapiens	RefSeq	NM_013275.4	ILMN_28595	ANKRD11	NM_013275.4	NM_013275.4		29123	56676396	NM_013275.4	ANKRD11	NP_037407.4	ILMN_1690465	0005890403	S	5980	CGGAGAAGTTTGCCTGCTTGTCGCCAGGGTACTACTCCCCAGACTATGGC	16	-	89347381-89347430	16q24.3a-q24.3b	Homo sapiens ankyrin repeat domain 11 (ANKRD11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			LZ16; T13; ANCO-1	LZ16; T13; ANCO-1
Homo sapiens	RefSeq	NM_013275.4	ILMN_28595	ANKRD11	NM_013275.4	NM_013275.4		29123	56676396	NM_013275.4	ANKRD11	NP_037407.4	ILMN_2108709	0003370274	S	9001	CAGAGCCAGGACTCCCAGCCGTATTGAAATGGAGTCAAATCCGCGTGGTT	16	-	89334288-89334337	16q24.3a-q24.3b	Homo sapiens ankyrin repeat domain 11 (ANKRD11), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			LZ16; T13; ANCO-1	LZ16; T13; ANCO-1
Homo sapiens	RefSeq	XM_931694.1	ILMN_38581	LOC643624	XM_931694.1	XM_931694.1		643624	89031663	XM_931694.1	LOC643624	XP_936787.1	ILMN_1661149	0005260128	S	960	TGCATGGACCACCAGCCTGAGCTGCCCGCTGTCCTGCCTGCAGGGCCTGC	10	+	131989917-131989966		PREDICTED: Homo sapiens hypothetical protein LOC643624 (LOC643624), mRNA.					
Homo sapiens	RefSeq	XR_041718.1	ILMN_349549	C17ORF86	XR_041718.1	XR_041718.1		654434	169210716	XR_041718.1	C17orf86		ILMN_3269835	0005900632	M	75	TGTCTTTGCGATGGAGTCTCACTCTGTCGCCAGGCTGGAGTGCAGTGGCA	17	+	72602155-72602204	17q25.2b	PREDICTED: Homo sapiens misc_RNA (C17orf86), miscRNA.					
Homo sapiens	RefSeq	NM_001012991.2	ILMN_24954	C16ORF88	NM_001012991.2	NM_001012991.2		400506	111607440	NM_001012991.2	C16orf88	NP_001013009.2	ILMN_3246732	0003710524	S	1626	GGAGATTAAGGACGAGGACAACTATATTGATGGGCTTGGATGAACTGGGG	16	-	19717948-19717997	16p12.3a	Homo sapiens chromosome 16 open reading frame 88 (C16orf88), mRNA.				101F10.1	101F10.1
Homo sapiens	RefSeq	XM_937092.1	ILMN_172280	LOC646892	XM_001132402.1	XM_001132402.1		646892	113425332	XM_001132402.1	LOC646892	XP_001132402.1	ILMN_1701610	0000610026	S	277	CGCTGCCGACATTTTGTCATCAACCAGCTTCGAAACCGGCGTTACATCAT	15	+	76177336-76177385	15q25.1a	PREDICTED: Homo sapiens similar to SH2 domain protein 2A (T cell-specific adapter protein) (TSAd) (VEGF receptor-associated protein) (SH2 domain-containing adapter protein) (LOC646892), mRNA.					
Homo sapiens	RefSeq	NM_002871.3	ILMN_17123	RABIF	NM_002871.3	NM_002871.3		5877	31543539	NM_002871.3	RABIF	NP_002862.2	ILMN_1691862	0004010338	S	1877	AGTTATCCACACAAGTCAGGAGCAAAACCCAAGTAGATGCCTCTAGGGGC	1	-	202848588-202848637	1q32.1d	Homo sapiens RAB interacting factor (RABIF), mRNA.		The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 9441742] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 7619808] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 7619808] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RASGRF3; RASGFR3; MSS4	RASGRF3; RASGFR3; MSS4
Homo sapiens	RefSeq	NM_001001787.1	ILMN_10855	ATP1B1	NM_001001787.1	NM_001001787.1		481	49574488	NM_001001787.1	ATP1B1	NP_001001787.1	ILMN_2407824	0004220468	A	1066	GTTATGCTTGTATTGAATGCTGTCTTGACATCTCTTGCCTTGTCCTCCGG	1	+	167368094-167368143	1q24.2b	Homo sapiens ATPase, Na+/K+ transporting, beta 1 polypeptide (ATP1B1), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Sodium:potassium-exchanging ATPases are tetrameric proteins, consisting of two large alpha subunits and two smaller beta subunits. The alpha subunits bear the active site and penetrate the membrane, while the beta subunits carry oligosaccharide groups and face the cell exterior [goid 5890] [pmid 2559024] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Na+(in) + K+(out) = ADP + phosphate + Na+(out) + K+(in) [goid 5391] [pmid 2559024] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17947299] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC1798; ATP1B	MGC1798; ATP1B
Homo sapiens	Unigene	Hs.574465	ILMN_126646	HS.574465	Hs.574465		Hs.574465		2079281	AA419553			ILMN_1915958	0002190348	S	347	GTGGTATCGACGCAAGGAAAGGCAAGCTGACCAAGGCAAGCTGACCAGTG					zv03e08.r1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:752582 5 similar to contains L1.t2 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_030776.1	ILMN_24934	ZBP1	NM_030776.1	NM_030776.1		81030	13540544	NM_030776.1	ZBP1	NP_110403.1	ILMN_1765994	0004880010	S	1777	GGGGCATCTGCCTGGAGTTACCTTCCATCATGGCTACCTGCTGTGGTTTG	20	-	55612676-55612725	20q13.31a	Homo sapiens Z-DNA binding protein 1 (ZBP1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA in the Z form, i.e. a left-handed helix in which the phosphate backbone zigzags [goid 3692] [pmid 11842111] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: adenosine + H2O = inosine + NH3, in a double-stranded RNA molecule [goid 3726] [evidence IEA]	DLM-1; DLM1; C20orf183	C20orf183; DLM-1; DLM1
Homo sapiens	RefSeq	NM_002884.2	ILMN_19970	RAP1A	NM_002884.2	NM_002884.2		5906	58331200	NM_002884.2	RAP1A	NP_002875.1	ILMN_1809191	0000630487	A	1520	GCGACAGTAGCTCCTTTCTGCCTAGTATCTGCAGAACACTGGCTTTAAAC	1	+	112057332-112057381	1p13.2d	Homo sapiens RAP1A, member of RAS oncogene family (RAP1A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16284401] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10777492] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11022048] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAP1; KREV-1; KREV1; SMGP21	RAP1; KREV-1; KREV1; SMGP21
Homo sapiens	RefSeq	NM_152228.1	ILMN_180061	TAS1R3	NM_152228.1	NM_152228.1		83756	91206395	NM_152228.1	TAS1R3	NP_689414.1	ILMN_2108135	0001740128	S	1191	GTATAGCGTGGCCCAGGCCCTGCACAACACTCTTCAGTGCAACGCCTCAG	1	+	1257965-1258014	1p36.33a	Homo sapiens taste receptor, type 1, member 3 (TAS1R3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11917125] [evidence IC ]	The series of events required for a sweet taste stimulus to be received and converted to a molecular signal [goid 1582] [pmid 16720576] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 16720576] [evidence IC ]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates [goid 50917] [pmid 11917125] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble sweet compounds to initiate a change in cell activity. These receptors are responsible for the sense of sweet taste [goid 33041] [pmid 16720576] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11917125] [evidence NAS]	T1R3	T1R3
Homo sapiens	RefSeq	NM_000693.1	ILMN_25111	ALDH1A3	NM_000693.1	NM_000693.1		220	4502040	NM_000693.1	ALDH1A3	NP_000684.1	ILMN_2139970	0004920148	S	3364	TAGGCCTGGGAATTCCGATCCTAGCTGCAGATCGCATCCCACAATGCGAG	15	+	99274274-99274323	15q26.3c	Homo sapiens aldehyde dehydrogenase 1 family, member A3 (ALDH1A3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells [goid 6066] [pmid 7698756] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7698756] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [pmid 7698756] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	RALDH3; ALDH6; ALDH1A6	RALDH3; ALDH6; ALDH1A6
Homo sapiens	RefSeq	XM_926149.1	ILMN_39902	LOC642384	XM_926149.2	XM_926149.2		642384	113421803	XM_926149.2	LOC642384	XP_931242.1	ILMN_1669443	0007330577	S	247	GCATCCATGTCTTGACATCCAGTGTAGACAGCATTGACCTCTTGGTATCC				10p15.3b	PREDICTED: Homo sapiens hypothetical LOC642384 (LOC642384), mRNA.					
Homo sapiens	RefSeq	NM_003868.1	ILMN_22755	FGF16	NM_003868.1	NM_003868.1		8823	4503690	NM_003868.1	FGF16	NP_003859.1	ILMN_1785564	0005310392	S	486	CGTGGCCCTGAACAAAGATGGCTCACCCCGGGAGGGATACAGGACTAAAC	X	+	76711796-76711845	Xq21.1a	Homo sapiens fibroblast growth factor 16 (FGF16), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11294897] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1697263] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16597617] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9473496] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9473496] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9473496] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [pmid 9473496] [evidence TAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17133345] [evidence EXP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus [goid 9266] [pmid 9473496] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9473496] [evidence TAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 9473496] [evidence TAS]		
Homo sapiens	RefSeq	NM_033657.1	ILMN_41958	LOC645676	XM_930505.2	XM_930505.2		645676	113411465	XM_930505.2	LOC645676	XP_935598.1	ILMN_1666706	0006450332	I	1941	GTGAGGGAATGGACCGACACGGGTATTGTACCGCTGAGGGAAAGGAGCGG	1	+	153799745-153799794	1q22b	PREDICTED: Homo sapiens hypothetical protein LOC645676, transcript variant 1 (LOC645676), mRNA.					MGC126059; MGC126058; bMRP-10; MRP-S29; DKFZp686G12159; DAP-3; MRPS29
Homo sapiens	RefSeq	NR_029890.1	ILMN_388262	MIR323	NR_029890.1	NR_029890.1		442897	262206339	NR_029890.1	MIR323		ILMN_3310256	0005080068	S	28	CGCGTTCGCTTTATTTATGGCGCACATTACACGGTCGACCTCTTTGCAGT				14q32.31a	Homo sapiens microRNA 323 (MIR323), microRNA.					
Homo sapiens	RefSeq	NM_182617.2	ILMN_179375	ACSM2B	NM_182617.2	NM_182617.2		348158	52138579	NM_182617.2	ACSM2B	NP_872423.2	ILMN_1746128	0004760202	I	1318	CAGGTTATAGATGATAAGGGCAACGTCCTGCCCCCCGGCACAGAAGGAGA	16	-	20464034-20464081:20465217-20465218	16p12.3a	Homo sapiens acyl-CoA synthetase medium-chain family member 2B (ACSM2B), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	HYST1046; HXMA; ACSM2	HYST1046; HXMA
Homo sapiens	RefSeq	XM_936869.1	ILMN_179375	ACSM2B	NM_182617.2	NM_182617.2		348158	52138579	NM_182617.2	ACSM2B	NP_872423.2	ILMN_1657592	0000630228	A	1426	AATCCCGACAAGACAGCAGCCAACATTCGAGGAGACTTTTGGCTCCTTGG	16	-	20462032-20462081	16p12.3a	Homo sapiens acyl-CoA synthetase medium-chain family member 2B (ACSM2B), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	HYST1046; HXMA; ACSM2	
Homo sapiens	RefSeq	XM_936876.1	ILMN_179375	ACSM2B	NM_182617.2	NM_182617.2		348158	52138579	NM_182617.2	ACSM2B	NP_872423.2	ILMN_1765912	0003390280	A	925	GACACAGGTTGGATACTGAACATCTTGGGCTCACTTTTGGAATCTTGGAC	16	-	20471027-20471076	16p12.3a	Homo sapiens acyl-CoA synthetase medium-chain family member 2B (ACSM2B), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]	HYST1046; HXMA; ACSM2	
Homo sapiens	RefSeq	NM_178587.1	ILMN_12741	PPP2R5C	NM_178587.1	NM_178587.1		5527	31083242	NM_178587.1	PPP2R5C	NP_848702.1	ILMN_1795846	0006270647	I	1517	GGGGGGTCTCGATTTCACTAACGTTGTATATGAAAATGTCTGCAATAAAA	14	+	101448646-101448695	14q32.31b	Homo sapiens protein phosphatase 2, regulatory subunit B', gamma isoform (PPP2R5C), transcript variant 3, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12297508] [evidence IDA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 8703017] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8703017] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [pmid 12297508] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8703017] [evidence NAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 12297508] [evidence IDA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17540176] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15380617] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8617797] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 8703017] [evidence NAS]	PR61G; MGC23064; B56G	PR61G; MGC23064; B56G
Homo sapiens	RefSeq	NM_020899.2	ILMN_5011	ZBTB4	NM_020899.2	NM_020899.2		57659	34222119	NM_020899.2	ZBTB4	NP_065950.1	ILMN_2097793	0002900441	S	5506	CCAGAATGTGGTGGTTCTGGGCAACAAATGAGATTGTGGCGACGTGGAGA	17	-	7303744-7303793	17p13.1d	Homo sapiens zinc finger and BTB domain containing 4 (ZBTB4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KAISO-L1; KIAA1538	KAISO-L1; KIAA1538
Homo sapiens	RefSeq	NM_020899.2	ILMN_5011	ZBTB4	NM_020899.2	NM_020899.2		57659	34222119	NM_020899.2	ZBTB4	NP_065950.1	ILMN_1795905	0002120441	S	5348	CTGAGGCAAACAGGCATGGGAAAATGGAAGGGTTGAGGATGGACCGGAGA	17	-	7303902-7303951	17p13.1d	Homo sapiens zinc finger and BTB domain containing 4 (ZBTB4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KAISO-L1; KIAA1538	KAISO-L1; KIAA1538
Homo sapiens	RefSeq	NM_021137.3	ILMN_14664	TNFAIP1	NM_021137.3	NM_021137.3		7126	26051238	NM_021137.3	TNFAIP1	NP_066960.1	ILMN_1655429	0001690681	S	3079	CAGTGTCTCAGTCTTTTTTGCCGAGAAAGCACAGTAGTCTGGGACTGGGC	17	+	23697670-23697719	17q11.2a	Homo sapiens tumor necrosis factor, alpha-induced protein 1 (endothelial) (TNFAIP1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1370465] [evidence IEP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	EDP1; B61; B12; MGC2317	EDP1; MGC2317; B61; B12
Homo sapiens	RefSeq	NM_199046.1	ILMN_22420	TEPP	NM_199456.2	NM_199456.2		374739	154759244	NM_199456.2	TEPP	NP_955535.2	ILMN_1670440	0004560167	A	749	CTGGACCGCTACGGACAGAAGCCCCTGCCTTTCGACTCCCTGAACACTTT	16	+	56576911-56576951:56577314-56577322	16q13d	Homo sapiens testis, prostate and placenta expressed (TEPP), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC129931; MGC129930	MGC129931; MGC129930
Homo sapiens	RefSeq	XM_933102.1	ILMN_167821	FAM153C	NM_001079527.1	NM_001079527.1		653316	118601001	NM_001079527.1	FAM153C	NP_001072995.1	ILMN_1765002	0006840528	I	1106	CGCAGAATGATGAGGGAAGCAGGCACGTGCCCATGTTCTTCTTGGCTACG	5	+	177406561-177406610	5q35.3b	Homo sapiens family with sequence similarity 153, member C (FAM153C), mRNA.				NY-REN-7-like	
Homo sapiens	RefSeq	NM_001079527.1	ILMN_167821	FAM153C	NM_001079527.1	NM_001079527.1		653316	118601001	NM_001079527.1	FAM153C	NP_001072995.1	ILMN_2145914	0007000209	S	1304	GAGAACATGCTCCAGGAAACAGACACCCACTCCATAGCAGCCCGAGCCTG	5	+	177406759-177406808	5q35.3b	Homo sapiens family with sequence similarity 153, member C (FAM153C), mRNA.				NY-REN-7-like	NY-REN-7-like
Homo sapiens	RefSeq	NM_015155.1	ILMN_21072	LARP4B	NM_015155.1	NM_015155.1		23185	57634535	NM_015155.1	LARP4B	NP_055970.1	ILMN_1766222	0006100619	S	5300	CAGGCTTCAAAACCAGTTCAGTGTATCCGGGCGACGGGTAGTGGTGGTGC	10	-	857345-857394	10p15.3c	Homo sapiens La ribonucleoprotein domain family, member 4B (LARP4B), mRNA.				RP11-164C1.3; KIAA0217; DKFZp686M23113	RP11-164C1.3; KIAA0217; DKFZp686M23113
Homo sapiens	RefSeq	NM_006345.3	ILMN_171274	SLC30A9	NM_006345.3	NM_006345.3		10463	57164947	NM_006345.3	SLC30A9	NP_006336.3	ILMN_1799128	0004220170	S	3057	GTTCAGGTAGCAGTGAGCATTGTTCATATGAGAATGGCGGCTGGGTGATC	4	+	41784104-41784153	4p13d	Homo sapiens solute carrier family 30 (zinc transporter), member 9 (SLC30A9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10409434] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10409434] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10409434] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	C4orf1; HUEL; ZNT9; GAC63	C4orf1; HUEL; ZNT9; GAC63
Homo sapiens	Unigene	Hs.553134	ILMN_111247	HS.553134	Hs.553134		Hs.553134		21753807	AK094700			ILMN_1905482	0004490458	S	1795	TCCCATCCCCATTTGTAGCCAACTTTATTCCATTCTCTGCCCAACCACGG	7	-	124169859-124169908		Homo sapiens cDNA FLJ37381 fis, clone BRAMY2025996					
Homo sapiens	RefSeq	NM_213599.1	ILMN_27431	ANO5	NM_213599.1	NM_213599.1		203859	47106047	NM_213599.1	ANO5	NP_998764.1	ILMN_1690154	0001450593	S	3088	CTGCCTTACTTCACTTTATCCTCTGGTTTTAGGGCCAGACGCCAGAAGCC	11	+	22257916-22257965	11p14.3d	Homo sapiens anoctamin 5 (ANO5), mRNA.				GDD1	GDD1
Homo sapiens	Unigene	Hs.577726	ILMN_129907	HS.577726	Hs.577726		Hs.577726		1997956	AA345637			ILMN_1900628	0000510707	S	47	CTGAAGGGTGTGAAGAGGATACTGACCCACCAGAAAGAGACCCCACTGCT	12	+	9299423-9299472		EST51770 Gall bladder I Homo sapiens cDNA 5 end, mRNA sequence					
Homo sapiens	RefSeq	NM_018080.2	ILMN_2446	VPS13C	NM_018080.2	NM_018080.2		54832	66348090	NM_018080.2	VPS13C	NP_060550.2	ILMN_2398865	0006400376	A	10296	GGCCCTGAAGAATTTGCAGAGGGGTTAGTGATTGGAGTGAGAAGCCTCTT	15	-	62167088-62167137	15q22.2b	Homo sapiens vacuolar protein sorting 13 homolog C (S. cerevisiae) (VPS13C), transcript variant 1B, mRNA.		Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		DKFZp686E0570; FLJ21361	DKFZp686E0570; FLJ21361
Homo sapiens	RefSeq	NM_031440.1	ILMN_11710	RTP3	NM_031440.1	NM_031440.1		83597	13899262	NM_031440.1	RTP3	NP_113628.1	ILMN_2149204	0002570487	S	619	AGGTGGAGGAGGTAGTTAAGCCCTGGGCCTCAGGAGAGAATGTCTATTCC	3	+	46517245-46517294	3p21.31i	Homo sapiens receptor (chemosensory) transporter protein 3 (RTP3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16720576] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of events required for a bitter taste stimulus to be received and converted to a molecular signal [goid 1580] [pmid 16720576] [evidence IDA]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 16720576] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16720576] [evidence IPI]	LTM1; TMEM7	LTM1; TMEM7
Homo sapiens	RefSeq	NM_001015878.1	ILMN_13261	AURKC	NM_001015878.1	NM_001015878.1		6795	62865638	NM_001015878.1	AURKC	NP_001015878.1	ILMN_1675376	0003130750	I	196	TCCCCCAGAGCTGTGGTGCAGCTGGGCAAAGCTCAACCTGCAGGCGAAGA	19	+	57742623-57742672	19q13.43b	Homo sapiens aurora kinase C (AURKC), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10066797] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 10066797] [evidence TAS]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 10066797] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10066797] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AIE2; STK13; aurora-C; AIK3; AurC	AIE2; STK13; aurora-C; AIK3; AurC
Homo sapiens	RefSeq	NM_012213.1	ILMN_2280	MLYCD	NM_012213.2	NM_012213.2		23417	110349749	NM_012213.2	MLYCD	NP_036345.2	ILMN_1651336	0007330377	S	1855	ATCTGGCATCCTCCTAAGGACCGGGGCGCGTGGCCCAGATAAGAATAGGT	16	+	82506948-82506997	16q23.3b	Homo sapiens malonyl-CoA decarboxylase (MLYCD), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10455107] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10455107] [evidence TAS]	The chemical reactions and pathways involving acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis [goid 6084] [pmid 9869665] [evidence TAS]; The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes [goid 6633] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [pmid 10417274] [evidence TAS]	Catalysis of the reaction: (S)-2-methyl-3-oxopropanoyl-CoA = propanoyl-CoA + CO2 [goid 4492] [pmid 9869665] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: malonyl-CoA = acetyl-CoA + CO2 [goid 50080] [evidence IEA]	MCD; MGC59795	hMCD; MCD
Homo sapiens	RefSeq	NR_024416.1	ILMN_371690	FLJ35390	NR_024416.1	NR_024416.1		255031	212286152	NR_024416.1	FLJ35390		ILMN_3269655	0001090377	M	1917	GCCGAGTTCGTGGTCACTGCACTCCAGCCTGGCTACAGAGTGAGATTCCA	7	+	44081852-44081901		Homo sapiens hypothetical LOC255031 (FLJ35390), transcript variant 1, non-coding RNA.					
Homo sapiens	RefSeq	NR_002580.1	ILMN_10986	SNORA3	NR_002580.1	NR_002580.1		619562	77993285	NR_002580.1	SNORA3		ILMN_3239108	0007330463	S	6	GGCTAGAGTCACGCTTGGGTATCGGCTATTGCCTGAGTGTGCTAGAGTCC	11	+	8662355-8662404	11p15.4b	Homo sapiens small nucleolar RNA, H/ACA box 3 (SNORA3), small nucleolar RNA.				ACA3	ACA3
Homo sapiens	RefSeq	XM_001715448.1	ILMN_342268	LOC729350	XM_001715448.1	XM_001715448.1		729350	169167200	XM_001715448.1	LOC729350	XP_001715500.1	ILMN_3301334	0005570719	M	329	ACGGGGGCGTGTACCTGGAGAGCAACGGAGCCTATGAGGTTGGTCCTATT				4q31.1c	PREDICTED: Homo sapiens hypothetical LOC729350 (LOC729350), mRNA.					
Homo sapiens	RefSeq	NM_000452.1	ILMN_28775	SLC10A2	NM_000452.1	NM_000452.1		6555	4506972	NM_000452.1	SLC10A2	NP_000443.1	ILMN_1683670	0001980040	S	3498	GGATGCCAGCAGCTGCAGCAAGCAGGTTTTTCCTCCCTGTTGAGCAAGAC	13	-	102494580-102494629	13q33.1b	Homo sapiens solute carrier family 10 (sodium/bile acid cotransporter family), member 2 (SLC10A2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9109432] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7592981] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of organic anions into, out of, within or between cells. Organic anions are atoms or small molecules with a negative charge which contain carbon in covalent linkage [goid 15711] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: bile acid(out) + Na+(out) = bile acid(in) + Na+(in) [goid 8508] [pmid 9109432] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NTCP2; ISBT; ASBT	NTCP2; ISBT; ASBT
Homo sapiens	RefSeq	XM_932167.1	ILMN_34887	LOC644399	XM_932167.1	XM_932167.1		644399	88954250	XM_932167.1	LOC644399	XP_937260.1	ILMN_1671748	0004210021	S	61	CGTGCTGGGCTCCAGGGCCCTGAGAGTCGGGCCCGCTGCGCGCAGCCAGG	2	-	242275279-242275314:242275438-242275451		PREDICTED: Homo sapiens hypothetical protein LOC644399 (LOC644399), mRNA.					
Homo sapiens	RefSeq	NM_002290.2	ILMN_4021	LAMA4	NM_002290.2	NM_002290.2		3910	9845494	NM_002290.2	LAMA4	NP_002281.1	ILMN_1795442	0007160253	S	5625	CCTTCACAGGCTGCATACGCCACTTTGTGATTGATGGACACCCAGTGAGC	6	-	112537392-112537441	6q21i	Homo sapiens laminin, alpha 4 (LAMA4), mRNA.	A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [pmid 7959779] [evidence TAS]; A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]	Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 7959779] [evidence TAS]	LAMA3; DKFZp686D23145; LAMA4*-1	LAMA3; DKFZp686D23145; LAMA4*-1
Homo sapiens	RefSeq	NM_002290.2	ILMN_4021	LAMA4	NM_002290.2	NM_002290.2		3910	9845494	NM_002290.2	LAMA4	NP_002281.1	ILMN_2140059	0005130435	S	5829	GGAAGCTTTCATCGAGTTGAACAGGACTTAAACGAATCATCAGGGACCGG	6	-	112537188-112537237	6q21i	Homo sapiens laminin, alpha 4 (LAMA4), mRNA.	A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin sheet of proteoglycans and glycoproteins, especially laminin, secreted by cells as an extracellular matrix [goid 5605] [pmid 7959779] [evidence TAS]; A laminin complex composed of alpha1, beta1 and gamma1 polypeptide chains [goid 5606] [evidence IEA]	Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to another cell or to the extracellular matrix [goid 30155] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 7959779] [evidence TAS]	LAMA3; DKFZp686D23145; LAMA4*-1	LAMA3; DKFZp686D23145; LAMA4*-1
Homo sapiens	RefSeq	NM_001619.2	ILMN_22739	ADRBK1	NM_001619.2	NM_001619.2		156	6138971	NM_001619.2	ADRBK1	NP_001610.1	ILMN_1673330	0005700181	S	3454	AGCTGACAGTCCTCTCCACCTAGTGGCTGTCCAGTGCCCATTCCTCACCT	11	+	66810797-66810846	11q13.1f	Homo sapiens adrenergic, beta, receptor kinase 1 (ADRBK1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1339451] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17986524] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the extent of heart contraction, changing the force with which blood is propelled [goid 2026] [evidence IEA]; The process that stops, prevents or reduces the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity after prolonged stimulation with an agonist of the pathway [goid 2029] [evidence IEA]; Any process which decreases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine [goid 3108] [pmid 15051637] [evidence IMP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a muscarinic acetylcholine receptor binding to one of its physiological ligands; muscarinic acetylcholine receptors activate inhibitory G proteins and can be activated by the fungal alkaloid muscarine [goid 7213] [evidence ISS]; The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [pmid 17986524] [evidence IDA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the regulated release of a catecholamine [goid 33605] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of striated muscle contraction [goid 45988] [pmid 15051637] [evidence IMP]; Muscle contraction of cardiac muscle tissue [goid 60048] [pmid 15051637] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + beta-adrenergic receptor = ADP + phospho-beta-adrenergic receptor [goid 47696] [evidence IEA]	BETA-ARK1; GRK2; BARK1	BETA-ARK1; GRK2; BARK1
Homo sapiens	Unigene	Hs.541645	ILMN_105845	HS.541645	Hs.541645		Hs.541645		6474402	AW195332			ILMN_1893915	0005310576	S	207	CCCACAGGCCCCTGGGATCTTCCCTAGGGTATTGCTAAAACAGCATTGGG	2	-	174587153-174587202		xn37b02.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2695851 3, mRNA sequence					
Homo sapiens	RefSeq	XM_941953.1	ILMN_37502	LOC652493	XM_941953.1	XM_941953.1		652493	89062898	XM_941953.1	LOC652493	XP_947046.1	ILMN_1739508	0000150609	S	46	CTGGGGCTCCTGCTGCTCTGGCTCCCAGGTGCCAGATGTGACATCCAGTT					PREDICTED: Homo sapiens similar to Ig kappa chain V-I region HK102 precursor (LOC652493), mRNA.					
Homo sapiens	RefSeq	NM_023943.1	ILMN_7801	TMEM108	NM_023943.1	NM_023943.1		66000	45387950	NM_023943.1	TMEM108	NP_076432.1	ILMN_1669709	0006940753	S	1814	CCCGCTCCCCAGCCAATGGCGACTATAGAGACACTGGGATGGTCCTTGTT	3	+	134597414-134597463	3q22.1d	Homo sapiens transmembrane protein 108 (TMEM108), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC3040	MGC3040
Homo sapiens	RefSeq	NM_005484.2	ILMN_7987	PARP2	NM_005484.2	NM_005484.2		10038	11496991	NM_005484.2	PARP2	NP_005475.1	ILMN_1757995	0001850612	S	1599	GGGAGTACAGTGCCATTAGGACCAGCAAGTGACACAGGAATTCTGAATCC	14	+	19895641-19895690	14q11.2b	Homo sapiens poly (ADP-ribose) polymerase family, member 2 (PARP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [pmid 7260241] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	ADPRTL3; ADPRTL2; PARP-2; ADPRT2; pADPRT-2	ADPRTL3; ADPRTL2; PARP-2; ADPRT2; pADPRT-2
Homo sapiens	RefSeq	NR_029858.1	ILMN_388159	MIR302C	NR_029858.1	NR_029858.1		442895	262206185	NR_029858.1	MIR302C		ILMN_3308265	0003990307	S	15	GGGGGTACCTGCTGTGTGAAACAAAAGTAAGTGCTTCCATGTTTCAGTGG				4q25f	Homo sapiens microRNA 302c (MIR302C), microRNA.					
Homo sapiens	RefSeq	XM_928821.1	ILMN_37557	LOC645837	XM_928821.1	XM_928821.1		645837	89059843	XM_928821.1	LOC645837	XP_933914.1	ILMN_1780656	0004180685	S	146	ACATCTGGTACTTCCGCCTGGGGCGAGGGCGCTGGGCTTGGCTGGGCTCA	X	+	70899837-70899867:70899914-70899932		PREDICTED: Homo sapiens hypothetical protein LOC645837 (LOC645837), mRNA.					
Homo sapiens	RefSeq	NM_001024.3	ILMN_2103	RPS21	NM_001024.3	NM_001024.3		6227	71483115	NM_001024.3	RPS21	NP_001015.1	ILMN_1800573	0002690338	S	7	CGCCGATATCTCTGCCGGGTGACTAGCTGCTTCCTTTCTCTCTCGCGCGC	20	+	60395522-60395571	20q13.33c	Homo sapiens ribosomal protein S21 (RPS21), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 8706699] [evidence IDA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 8332502] [evidence NAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 10079194] [evidence IPI]		
Homo sapiens	RefSeq	NM_139169.3	ILMN_26216	TRUB1	NM_139169.4	NM_139169.4		142940	115583658	NM_139169.4	TRUB1	NP_631908.1	ILMN_1744574	0000450341	S	864	CCTGTGCCAATGTGCTAGAGCTGACCCGAACCAAACAGGGACCATTTACG	10	+	116702418-116702467	10q25.3a	Homo sapiens TruB pseudouridine (psi) synthase homolog 1 (E. coli) (TRUB1), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IEA]	Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	PUS4	PUS4
Homo sapiens	RefSeq	XM_946075.1	ILMN_137737	VCX2	XM_946075.1	XM_946075.1		51480	89060619	XM_946075.1	VCX2	XP_951168.1	ILMN_1690557	0004810609	I	371	GGTAGAGCAGCTTCAGGTCCCATGGCTACCCCCATGCAAAGGAGAACCGA				Xp22.31c	PREDICTED: Homo sapiens variable charge, X-linked 2 (VCX2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NM_001077637.1	ILMN_170706	LOC150786	NM_001077637.1	NM_001077637.1		150786	117938298	NM_001077637.1	LOC150786	NP_001071105.1	ILMN_3251464	0004210386	S	3622	TATTGATAAATATAAGCTATGAATATTAAAGTTATAATTAAAGTTAAAAA	2	-	131838197-131838201:132118065-132118109	2q21.1d	Homo sapiens RAB6C-like (LOC150786), mRNA.					
Homo sapiens	RefSeq	NM_001077637.1	ILMN_170706	LOC150786	NM_001077637.1	NM_001077637.1		150786	117938298	NM_001077637.1	LOC150786	NP_001071105.1	ILMN_2041176	0001230332	S	3015	GGCATGTCCTGAAATAAATATTGATTCACTGTGGCAGATGGGTCATACTC	2	-	132118667-132118716	2q21.1d	Homo sapiens RAB6C-like (LOC150786), mRNA.					
Homo sapiens	RefSeq	NR_031613.1	ILMN_388541	MIR1208	NR_031613.1	NR_031613.1		100302281	269847116	NR_031613.1	MIR1208		ILMN_3310673	0003440600	S	9	AATCACTGTTCAGACAGGCGGAGACGGGTCTTTCTCGCCCTCTGATGAGT					Homo sapiens microRNA 1208 (MIR1208), microRNA.					
Homo sapiens	RefSeq	NM_032369.2	ILMN_15572	HVCN1	NM_032369.2	NM_032369.2		84329	91992154	NM_032369.2	HVCN1	NP_115745.2	ILMN_2365248	0003460239	A	769	ATTCTGCTCCGGCTGTGGCGGGTGGCCCGGATCATCAATGGGATTATCAT	12	-	111088075-111088085:111089022-111089060	12q24.11d	Homo sapiens hydrogen voltage-gated channel 1 (HVCN1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 16554753] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus [goid 9268] [pmid 16556803] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [pmid 16554753] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus [goid 10043] [pmid 16556803] [evidence ISS]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 16556803] [evidence ISS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a proton by a voltage-gated channel [goid 30171] [pmid 16556803] [evidence ISS]; Catalysis of the transmembrane transfer of a proton by a voltage-gated channel [goid 30171] [pmid 16554753] [evidence IDA]	VSOP; MGC15619; HV1	
Homo sapiens	RefSeq	NM_031883.2	ILMN_26867	PCDHAC2	NM_031883.2	NM_031883.2		56134	14717399	NM_031883.2	PCDHAC2	NP_114089.1	ILMN_2373592	0006760156	A	2478	GACTGACAGCAGGAATCTCACAGGCCAAAGTGGTCAGAATGCTGGGAACC	5	+	140329013-140329062	5q31.3b	Homo sapiens protocadherin alpha subfamily C, 2 (PCDHAC2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC71598; PCDH-ALPHA-C2	MGC71598; PCDH-ALPHA-C2
Homo sapiens	RefSeq	NM_031883.2	ILMN_26867	PCDHAC2	NM_031883.2	NM_031883.2		56134	14717399	NM_031883.2	PCDHAC2	NP_114089.1	ILMN_1777024	0002120674	I	2572	CAGTGGTCAGGGGGTCTTCTACAAACTCATGCATTTGTTACACATCCCCC	5	+	140329107-140329156	5q31.3b	Homo sapiens protocadherin alpha subfamily C, 2 (PCDHAC2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC71598; PCDH-ALPHA-C2	MGC71598; PCDH-ALPHA-C2
Homo sapiens	RefSeq	NM_003495.2	ILMN_25224	HIST1H4I	NM_003495.2	NM_003495.2		8294	18105065	NM_003495.2	HIST1H4I	NP_003486.1	ILMN_1670033	0005420242	S	62	AGGTGCTGCGCGACAACATCCAGGGTATCACCAAGCCAGCCATTCGGCGC	6	+	27107149-27107198	6p22.1c	Homo sapiens histone cluster 1, H4i (HIST1H4I), mRNA.				H4FM; H4/m; H4M	H4FM; H4/m; H4M
Homo sapiens	RefSeq	NM_032287.2	ILMN_162139	LDOC1L	NM_032287.2	NM_032287.2		84247	49355806	NM_032287.2	LDOC1L	NP_115663.2	ILMN_1691425	0002760441	S	4912	CAGGCTGTTTCCCAATGTCAAGTTATTAGGGTAGACTCCAGGAGGTGGGA	22	-	44888812-44888861	22q13.31a	Homo sapiens leucine zipper, down-regulated in cancer 1-like (LDOC1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]			Mart6; Mar6; DKFZp761O17121; dJ1033E15.2	Mart6; Mar6; DKFZp761O17121; dJ1033E15.2
Homo sapiens	RefSeq	NM_145342.1	ILMN_12000	MAP3K7IP2	NM_015093.2	NM_015093.2		23118	21735557	NM_015093.2	MAP3K7IP2	NP_055908.1	ILMN_1672331	0002470408	A	3717	GAGTGCTTAGAATGGGGCTAAGGGAAGTGCTGAAATAGAGCAAAGGATGG	6	+	149774005-149774054	6q25.1a	Homo sapiens mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (MAP3K7IP2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9744859] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10066798] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12609980] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9162092] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17158449] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0733; TAB2; FLJ21885	KIAA0733; TAB2; FLJ21885
Homo sapiens	RefSeq	NM_006383.2	ILMN_177584	CIB2	NM_006383.2	NM_006383.2		10518	44921612	NM_006383.2	CIB2	NP_006374.1	ILMN_1714489	0003420022	S	1203	TAACCCAACAGGAGGTGGTGGGGTCTGACGTGTCCAAGTGCTGGCAGACA	15	-	78397285-78397334	15q25.1a	Homo sapiens calcium and integrin binding family member 2 (CIB2), mRNA.		Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9931475] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIP2	KIP2
Homo sapiens	RefSeq	XR_019025.1	ILMN_181729	LOC391670	XR_019025.1	XR_019025.1		391670	113416141	XR_019025.1	LOC391670		ILMN_3275540	0007550703	M	198	GGAGGTGGATGTGGCCAAGAATGCAAAGCCACGCAATGTGGATGGAAGAC				4q21.1c	PREDICTED: Homo sapiens misc_RNA (LOC391670), miscRNA.					
Homo sapiens	RefSeq	XM_944941.1	ILMN_36190	LOC651787	XM_944941.2	XM_944941.2		651787	113424815	XM_944941.2	LOC651787	XP_950034.1	ILMN_1695011	0000270753	S	173	CCACATCAGCCACAAGAATGACCTTCCGGCATACAAGACACTTCTTACCA					PREDICTED: Homo sapiens hypothetical LOC651787 (LOC651787), mRNA.					
Homo sapiens	RefSeq	NM_018416.2	ILMN_165896	FOXJ2	NM_018416.2	NM_018416.2		55810	38146114	NM_018416.2	FOXJ2	NP_060886.1	ILMN_1731648	0004900332	S	5313	GTCCCTGCTCCTCATGTTTCTGGTTTGGTGAGTCCTTTGTGCCACCACCC	12	+	8099216-8099265	12p13.31c	Homo sapiens forkhead box J2 (FOXJ2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10777590] [evidence IC ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 10966786] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 10777590] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 10966786] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10966786] [evidence IDA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 10777590] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 10777590] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FHX	FHX
Homo sapiens	RefSeq	XR_039451.1	ILMN_341494	LOC388556	XR_039451.1	XR_039451.1		388556	169213975	XR_039451.1	LOC388556		ILMN_3207020	0001030139	A	508	CTGGATTCCCAGAAGCGCATCGACTTGTCTCTGCGCTCTCCCTATGGGGT				19q13.33b	PREDICTED: Homo sapiens misc_RNA (LOC388556), miscRNA.					
Homo sapiens	RefSeq	XM_927290.1	ILMN_40107	LOC644047	XM_927290.1	XM_927290.1		644047	88942976	XM_927290.1	LOC644047	XP_932383.1	ILMN_1697331	0005960427	S	61	ATTTTCTCCCACTTGATGATTATCTTCTCATTCTCTTGAAAGTGTCTTTT	1	-	118123070-118123119		PREDICTED: Homo sapiens similar to Proline-rich nuclear receptor coactivator 2 (LOC644047), mRNA.					
Homo sapiens	RefSeq	XR_000555.1	ILMN_169920	STELLAR	XR_017914.1	XR_017914.1		400206	113424570	XR_017914.1	STELLAR		ILMN_1683474	0000450035	A	48	TTTGCCCTGACAGTTCTCAAGGAAGTGGTCCTCCTGCTGCCCCAAGCCTG	14	+	35910168-35910217	14q13.3a	PREDICTED: Homo sapiens germ and embryonic stem cell enriched protein STELLA (STELLAR), misc RNA.					
Homo sapiens	RefSeq	NM_001327.1	ILMN_27139	CTAG1B	NM_001327.1	NM_001327.1		1485	4503118	NM_001327.1	CTAG1B	NP_001318.1	ILMN_2100957	0006840050	S	735	GAGGACGGCTTACATGTTTGTTTCTGTAGAAAATAAAACTGAGCTACGAA				Xq28g	Homo sapiens cancer/testis antigen 1B (CTAG1B), mRNA.				NY-ESO-1; LAGE-2; CTAG; CTAG1; ESO1; LAGE2B	NY-ESO-1; LAGE-2; CTAG; CTAG1; ESO1; LAGE2B
Homo sapiens	RefSeq	NM_001327.1	ILMN_27139	CTAG1B	NM_001327.1	NM_001327.1		1485	4503118	NM_001327.1	CTAG1B	NP_001318.1	ILMN_1719146	0004480209	S	1	AGCAGGGGGCGCTGTGTGTACCGAGAATACGAGAATACCTCGTGGGCCCT	X	-	153500664-153500713	Xq28g	Homo sapiens cancer/testis antigen 1B (CTAG1B), mRNA.				NY-ESO-1; LAGE-2; CTAG; CTAG1; ESO1; LAGE2B	NY-ESO-1; LAGE-2; CTAG; CTAG1; ESO1; LAGE2B
Homo sapiens	RefSeq	NM_000390.1	ILMN_15865	CHM	NM_000390.2	NM_000390.2		1121	82617643	NM_000390.2	CHM	NP_000381.1	ILMN_1709112	0002060048	S	1894	CAGCCAGAGGCTTCAGAATCCAGTGCCATACCAGAGGCTAACTCGGAGAC	X	-	85128059-85128108	Xq21.2a	Homo sapiens choroideremia (Rab escort protein 1) (CHM), transcript variant 1, mRNA.	A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [pmid 8380507] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 7981670] [evidence TAS]; The covalent attachment of a geranylgeranyl moiety to a protein amino acid [goid 18348] [pmid 8380507] [evidence TAS]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [pmid 8380507] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	TCD; REP-1; FLJ38564; DXS540; MGC102710; GGTA; HSD-32	TCD; REP-1; FLJ38564; DXS540; MGC102710; GGTA; HSD-32
Homo sapiens	RefSeq	XM_942734.1	ILMN_15865	CHM	NM_000390.2	NM_000390.2		1121	82617643	NM_000390.2	CHM	NP_000381.1	ILMN_1771238	0000780376	S	5159	CTGCCATAGTTACCTGGATTGTCAGCCTTGGTAGCCTTTGTCTAAAGTCC	X	-	85116762-85116811	Xq21.2a	Homo sapiens choroideremia (Rab escort protein 1) (CHM), transcript variant 1, mRNA.	A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; A heterodimeric enzyme complex, which in mammals is composed of an alpha and a beta subunit, and which associates with an accessory protein Rep (Rab escort protein). Catalyzes of the transfer of a geranyl-geranyl moiety from geranylgeranyl pyrophosphate to a Rab protein [goid 5968] [pmid 8380507] [evidence TAS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 7981670] [evidence TAS]; The covalent attachment of a geranylgeranyl moiety to a protein amino acid [goid 18348] [pmid 8380507] [evidence TAS]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [evidence IEA]; Catalysis of the reaction: 2 geranylgeranyl diphosphate + protein-cysteine = 2 S-geranylgeranyl-protein + 2 diphosphate. This reaction is the formation of two thioether linkages between the C-1 atom of the geranylgeranyl groups and two cysteine residues within the terminal sequence motifs XXCC, XCXC or CCXX. Known substrates include Ras-related GTPases of a single family and the Rab family [goid 4663] [pmid 8380507] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]	TCD; REP-1; FLJ38564; DXS540; MGC102710; GGTA; HSD-32	
Homo sapiens	RefSeq	NM_032344.1	ILMN_19793	NUDT22	NM_032344.1	NM_032344.1		84304	14150136	NM_032344.1	NUDT22	NP_115720.1	ILMN_1743582	0001660674	S	841	CTGACTTCTGAGCAGGTGAGGAAGCACTACCTGAGTGGGGGACCCGAGGC	11	+	63753533-63753582	11q13.1a	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 22 (NUDT22), mRNA.				MGC13045	MGC13045
Homo sapiens	RefSeq	NR_003721.1	ILMN_335604	CSN1S2B	NR_003721.1	NR_003721.1		317712	157073906	NR_003721.1	CSN1S2B		ILMN_3235699	0000110019	S	392	GCTGTCCTGCGTGGTTCCTAACAGGCCAAGGACCGGTACCGGTACCCCCT	4	-	71033911-71033960	4q13.3a	Homo sapiens casein alpha s2-like B (CSN1S2B), non-coding RNA.					
Homo sapiens	Unigene	Hs.563373	ILMN_116249	HS.563373	Hs.563373		Hs.563373		4901702	AI690400			ILMN_1865098	0002100619	S	281	GGAGAGGATCTCTCCTAGCTTCTGGTAGTTGCCAGCAAGGCTTGGCATTC					tx87c03.x1 NCI_CGAP_Ut4 Homo sapiens cDNA clone IMAGE:2276548 3 similar to contains MER18.t3 MER18 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_022133.2	ILMN_6842	SNX16	NM_022133.2	NM_022133.2		64089	23238243	NM_022133.2	SNX16	NP_071416.2	ILMN_1787415	0000940324	A	3083	TAGTGTTGCCTGTCTGTTCTAAAGCGAACCAGCCACTTTTTCAATCTGGC	8	-	82874531-82874580	8q21.13c	Homo sapiens sorting nexin 16 (SNX16), transcript variant 1, mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	DKFZp666H147	DKFZp666H147
Homo sapiens	RefSeq	NM_005053.2	ILMN_26245	RAD23A	NM_005053.2	NM_005053.2		5886	19924137	NM_005053.2	RAD23A	NP_005044.1	ILMN_1751571	0003520095	S	1607	CCATTGGAGTGGCCCAAATCTTTCCATCTAGGGCAAGTCCTGAAAGGCCC	19	+	12925269-12925318	19p13.13c	Homo sapiens RAD23 homolog A (S. cerevisiae) (RAD23A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [pmid 8808275] [evidence TAS]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 43161] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 8168482] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	HHR23A; MGC111083	HHR23A; MGC111083
Homo sapiens	RefSeq	NM_014405.2	ILMN_28387	CACNG4	NM_014405.2	NM_014405.2		27092	22027547	NM_014405.2	CACNG4	NP_055220.1	ILMN_1702149	0005090767	S	3060	GGGACCAAGAAAGAGTAGGAAGAAGGGGACGAGCCGGGAGCAAAACCACC	17	+	62459643-62459692	17q24.2a	Homo sapiens calcium channel, voltage-dependent, gamma subunit 4 (CACNG4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8825650] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10613843] [evidence TAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 10613843] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC24983; MGC11138	MGC24983; MGC11138
Homo sapiens	RefSeq	NM_145004.4	ILMN_18807	ADAM32	NM_145004.4	NM_145004.4		203102	40316951	NM_145004.4	ADAM32	NP_659441.2	ILMN_2293012	0006450164	I	2258	GCCAAGGAAGAGGAATTCCCAAGTAGCGAATCTAAATCGGAAGGTAGCAC	8	+	39233991-39234019:39247552-39247572	8p11.23b-p11.23a	Homo sapiens ADAM metallopeptidase domain 32 (ADAM32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ29004; FLJ26299	FLJ29004; FLJ26299
Homo sapiens	RefSeq	XM_931238.1	ILMN_38642	LOC643011	XM_931238.1	XM_931238.1		643011	89036832	XM_931238.1	LOC643011	XP_936331.1	ILMN_1719072	0005420706	S	2500	GATCATGTCACTGCACTCCAGACTGAGCAACAGAGTGACACTTTATAAAA	13	-	95124628-95124677		PREDICTED: Homo sapiens hypothetical protein LOC643011 (LOC643011), mRNA.					
Homo sapiens	RefSeq	NM_005249.3	ILMN_2253	FOXG1	NM_005249.3	NM_005249.3		2290	32307176	NM_005249.3	FOXG1	NP_005240.3	ILMN_2149946	0004200458	S	2251	GTTGTTTCAGTTGGCAACACTGCCCATTCAATTGAATCAGAAGGGGACAA	14	+	28308288-28308337	14q12c	Homo sapiens forkhead box G1 (FOXG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that activates or increases the rate of neuroblast proliferation [goid 2052] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline [goid 16199] [evidence IEA]; The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [evidence IEA]; The process by which the structures of a neuron are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a neuron [goid 48667] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 95048332] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FKHL1; KHL2; HFK3; HBF2; FOXG1C; QIN; FKHL2; HBF-2; HBF-1; FKH2; HFK1; FKHL4; HBF-G2; BF2; FHKL3; BF1; HFK2; HBF-3; FOXG1B; FKHL3; FOXG1A	FKHL1; KHL2; HFK3; HBF2; FOXG1C; QIN; FKHL2; HBF-2; HBF-1; FKH2; HFK1; FKHL4; HBF-G2; BF2; FHKL3; BF1; HFK2; HBF-3; FOXG1B; FKHL3; FOXG1A
Homo sapiens	RefSeq	XM_928604.1	ILMN_32032	LOC650167	XM_939249.1	XM_939249.1		650167	89061632	XM_939249.1	LOC650167	XP_944342.1	ILMN_1669796	0001340646	S	29	CCACCAGTATGACAATGGAGAACTCTCTCATTCTGGAGGATCCTTTTGAA					PREDICTED: Homo sapiens similar to zinc finger protein 617 (LOC650167), mRNA.					
Homo sapiens	RefSeq	XM_939249.1	ILMN_32032	LOC650167	XM_939249.1	XM_939249.1		650167	89061632	XM_939249.1	LOC650167	XP_944342.1	ILMN_1662730	0006770112	S	1	ATGCATCCTATCATCAGAAAAGATGCACCCACCAGTATGACAATGGAGAA					PREDICTED: Homo sapiens similar to zinc finger protein 617 (LOC650167), mRNA.					
Homo sapiens	RefSeq	XM_933693.1	ILMN_36463	LOC440731	XM_933693.2	XM_933693.2		440731	113411754	XM_933693.2	LOC440731	XP_938786.2	ILMN_1683250	0004010270	A	111	TGGCTAGAATATGGCAGTAACTACAAGGCATGTTCTGCTCTGGCACGAAG	1	-	229729706-229729755	1q42.2a	PREDICTED: Homo sapiens hypothetical LOC440731, transcript variant 2 (LOC440731), mRNA.					
Homo sapiens	RefSeq	XM_001719234.1	ILMN_347599	RFPL4A	XM_001719234.1	XM_001719234.1		342931	169214105	XM_001719234.1	RFPL4A	XP_001719286.1	ILMN_3227341	0001260168	A	276	GAAGTTTCAAGATCTGAGCTGTCCGCAGAAGCAGCTGGAGGCCAGGGGAG				19q13.42c	PREDICTED: Homo sapiens ret finger protein-like 4A (RFPL4A), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	Unigene	Hs.543412	ILMN_107007	HS.543412	Hs.543412		Hs.543412		6569518	AW237129			ILMN_1861128	0003390356	S	349	CAACATGGAATAGAGGGAGTTACAGGGGCAAGGACAGTGGTGAGTAGGCG	4	+	153458852-153458901		xm65h05.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2689113 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001031717.1	ILMN_14216	CRELD1	NM_001031717.1	NM_001031717.1		78987	72534727	NM_001031717.1	CRELD1	NP_001026887.1	ILMN_1808613	0002940561	I	1237	GAAGCTACTTTCCCAGGGCTATATGGCAAGCAAGTCGCAAAGCTGGGATC	3	+	9960690-9960739	3p25.3c	Homo sapiens cysteine-rich with EGF-like domains 1 (CRELD1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AVSD2; CIRRIN; DKFZP566D213	AVSD2; CIRRIN; DKFZP566D213
Homo sapiens	Unigene	Hs.156414	ILMN_79307	HS.156414	Hs.156414		Hs.156414		34532504	AK126122			ILMN_1891324	0005090047	S	1597	GAGTAGATTCAGAGAGTAAATGTTTTCCCAGGCTCAGGCAAGAGGGGTGG	6	+	81234990-81235039		Homo sapiens cDNA FLJ44134 fis, clone THYMU2008876					
Homo sapiens	RefSeq	XR_039693.1	ILMN_335682	LOC100131787	XR_039693.1	XR_039693.1		100131787	169162610	XR_039693.1	LOC100131787		ILMN_3199974	0004830377	A	211	AGCCTACAGGAGGAAAAGCAAGGCTTACAAGAAGGATGTTCCTTCAGATG	1	+	171977630-171977679	1q25.1a	PREDICTED: Homo sapiens misc_RNA (LOC100131787), miscRNA.					
Homo sapiens	RefSeq	NR_029619.1	ILMN_388224	MIR199B	NR_029619.1	NR_029619.1		406978	262206268	NR_029619.1	MIR199B		ILMN_3309159	0000520541	S	4	AGGACACCTCCACTCCGTCTACCCAGTGTTTAGACTATCTGTTCAGGACT				9q34.11b	Homo sapiens microRNA 199b (MIR199B), microRNA.					
Homo sapiens	RefSeq	XM_943331.1	ILMN_41246	LOC648456	XM_943331.1	XM_943331.1		648456	88956760	XM_943331.1	LOC648456	XP_948424.1	ILMN_1711678	0002060626	S	206	CTCCCCGCGACCCGCTGGAACGCCGCGCGGGCGTCTTCCTTACTTCCGCT					PREDICTED: Homo sapiens hypothetical protein LOC648456 (LOC648456), mRNA.					
Homo sapiens	Unigene	Hs.436046	ILMN_91580	HS.436046	Hs.436046		Hs.436046		11599574	BF514395			ILMN_1901974	0001940356	S	271	GAGATTTCGGAAGAGGACTGCGGGGCTGCCTGAAGAGAGATTTGCCTCAG	7	-	2722367-2722416		UI-H-BW1-ane-e-05-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3082065 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003749.2	ILMN_167991	IRS2	NM_003749.2	NM_003749.2		8660	38683859	NM_003749.2	IRS2	NP_003740.2	ILMN_2083469	0006110736	S	6369	GTAACTCCCCCCAGGTACGATAGGGACTGAATATGGACCCTGCTGAAAGC	13	-	110406763-110406812	13q34a	Homo sapiens insulin receptor substrate 2 (IRS2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12167717] [evidence EXP]	The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [pmid 9495343] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7675087] [evidence TAS]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9495343] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 7675087] [evidence TAS]; Interacting selectively with the insulin receptor [goid 5158] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IEA]		
Homo sapiens	RefSeq	NM_003841.2	ILMN_172658	TNFRSF10C	NM_003841.2	NM_003841.2		8794	22547120	NM_003841.2	TNFRSF10C	NP_003832.2	ILMN_1672114	0002260746	S	1205	TCTCATCAGTCCCTCTCCTGGAGCTGGGGGTCCACACATCTCCCAGCCAA	8	+	22974768-22974817	8p21.3a	Homo sapiens tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain (TNFRSF10C), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9314565] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9314565] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9314565] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CD263; DCR1; TRID; MGC149501; LIT; TRAILR3; MGC149502	CD263; DCR1; TRID; MGC149501; LIT; TRAILR3; MGC149502
Homo sapiens	RefSeq	NM_020132.3	ILMN_138486	AGPAT3	NM_020132.3	NM_020132.3		56894	41327762	NM_020132.3	AGPAT3	NP_064517.1	ILMN_1654010	0003850435	S	2098	AGCTCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGG	21	+	44227446-44227495	21q22.3c-q22.3d	Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 3 (AGPAT3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16780588] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16620771] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16780588] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [pmid 15367102] [evidence NAS]	Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol 3-phosphate = CoA + 1,2-diacyl-sn-glycerol 3-phosphate [goid 3841] [pmid 15367102] [evidence NAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol [goid 46027] [pmid 16620771] [evidence EXP]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC4604; LPAAT-GAMMA1	MGC4604; LPAAT-GAMMA1
Homo sapiens	RefSeq	XR_018109.2	ILMN_179156	LOC647334	XR_018109.2	XR_018109.2		647334	169166661	XR_018109.2	LOC647334		ILMN_3245716	0001770128	S	1127	GAATTTGGAAGACCCAGTTACAGGGTGTCCGCAGGCAGGGAACCAAGAGC					PREDICTED: Homo sapiens hypothetical LOC647334 (LOC647334), mRNA.					
Homo sapiens	RefSeq	XM_946257.1	ILMN_32827	LOC654202	XM_946257.1	XM_946257.1		654202	88945948	XM_946257.1	LOC654202	XP_951350.1	ILMN_1790384	0000150328	A	1304	GCCCTTTCCAGCCCCATCGAGACATTTCAGGGAATTGAAATGAACATGCG					PREDICTED: Homo sapiens similar to PR domain containing 2, with ZNF domain, transcript variant 2 (LOC654202), mRNA.					
Homo sapiens	RefSeq	XM_937741.1	ILMN_31174	LOC648674	XM_937741.1	XM_937741.1		648674	89060753	XM_937741.1	LOC648674	XP_942834.1	ILMN_1776389	0002450564	S	180	TGGCTTCGACGTCATTCCCTGCAATGATCTGCCTGCACTGGAGAGTGCTT					PREDICTED: Homo sapiens similar to Ornithine aminotransferase, mitochondrial precursor (Ornithine--oxo-acid aminotransferase) (LOC648674), mRNA.					
Homo sapiens	RefSeq	NM_018475.2	ILMN_13352	TMEM165	NM_018475.2	NM_018475.2		55858	32189370	NM_018475.2	TMEM165	NP_060945.2	ILMN_1773935	0000460672	S	1241	ACCGTTGTGCAGTGGGGTCTACCATGCAATTTTCTTTCAGCACTGACCCC	4	+	55986642-55986691	4q12d	Homo sapiens transmembrane protein 165 (TMEM165), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TMPT27; TPARL	TMPT27; TPARL
Homo sapiens	RefSeq	NM_004557.3	ILMN_29549	NOTCH4	NM_004557.3	NM_004557.3		4855	55770875	NM_004557.3	NOTCH4	NP_004548.3	ILMN_1711157	0007160390	S	6579	AGGTGCTGAAAAGTGGCCAAGGGCCACCCCCGCTGATGACTCCTTGCATT	6	-	32270714-32270763	6p21.32b	Homo sapiens Notch homolog 4 (Drosophila) (NOTCH4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8681805] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 11823422] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 11823422] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence ISS]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [pmid 11823422] [evidence TAS]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IEA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence ISS]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence ISS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of the myeloid and lymphoid derived organ/tissue systems of the blood and other parts of the body over time, from formation to the mature structure. The site of hemopoiesis is variable during development, but occurs primarily in bone marrow or kidney in many adult vertebrates [goid 30097] [pmid 11532344] [evidence TAS]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [pmid 9576833] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell differentiation [goid 45602] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell differentiation [goid 45602] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell differentiation [goid 45602] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11823422] [evidence TAS]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell differentiation [goid 45602] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell differentiation [goid 45602] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 50793] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11823422] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 11823422] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7671825] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 8681805] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MGC74442; NOTCH3; FLJ16302; INT3	MGC74442; NOTCH3; FLJ16302; INT3
Homo sapiens	Unigene	Hs.518926	ILMN_99522	HS.518926	Hs.518926		Hs.518926		3246020	AI028711			ILMN_1885603	0002100494	S	179	AGAGGCACAGGCTGGGATGTTCTCTTTATGGTTTCTTTGGTGAGACTGGC	1	-	195993088-195993137		ov92e10.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1644810 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016495.2	ILMN_10292	TBC1D7	NM_016495.2	NM_016495.2		51256	24475975	NM_016495.2	TBC1D7	NP_057579.1	ILMN_1661622	0002940367	S	905	CAGACGCGATCGTGAGCAAGGCCATTGACTTGTGGCACAAACACTGTGGG	6	-	13413334-13413383	6p24.1a	Homo sapiens TBC1 domain family, member 7 (TBC1D7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	DKFZp686N2317; PIG51; FLJ32666; dJ257A7.3; TBC7	DKFZp686N2317; PIG51; FLJ32666; dJ257A7.3; TBC7
Homo sapiens	RefSeq	NM_005852.2	ILMN_13824	CHD3	NM_001005271.1	NM_001005271.1		1107	52630323	NM_001005271.1	CHD3	NP_001005271.1	ILMN_1740764	0001230441	A	6616	TGAAGAGAGGAGGGGGACTTTAGAGAGGGATGAAAATGAGCCCTGGGAGG	17	+	7756063-7756112	17p13.1d	Homo sapiens chromodomain helicase DNA binding protein 3 (CHD3), transcript variant 3, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9688266] [evidence NAS]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9326634] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9326634] [evidence TAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [pmid 9326634] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12505151] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9688266] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Mi2-ALPHA; Mi-2a; ZFH	Mi2-ALPHA; Mi-2a; ZFH
Homo sapiens	RefSeq	XM_927008.1	ILMN_37992	LOC643712	XM_927008.1	XM_927008.1		643712	89037279	XM_927008.1	LOC643712	XP_932101.1	ILMN_1700763	0007570246	S	1001	CAAGGCAACTAGTGACAAGGCAAGATGAGTGGGGACAACTGCTTCTCACC	14	-	22641470-22641519		PREDICTED: Homo sapiens similar to Y43F4A.1a (LOC643712), mRNA.					
Homo sapiens	RefSeq	NM_004105.2	ILMN_41541	EFEMP1	NM_004105.3	NM_004105.3		2202	86787911	NM_004105.3	EFEMP1	NP_004096.2	ILMN_1735877	0001260040	A	2768	TCCTGGCATCCAGAGTGACAGTGAACTTAAGCAAATTACCCTCCTACCCA	2	-	56093202-56093251	2p16.1d	Homo sapiens EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10369267] [evidence TAS]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10369267] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12620389] [evidence IPI]	FBNL; MLVT; FLJ35535; FBLN3; DRAD; S1-5; MGC111353; DHRD; MTLV	FBNL; MLVT; FBLN3; DRAD; S1-5; MGC111353; DHRD
Homo sapiens	RefSeq	NM_004105.2	ILMN_41541	EFEMP1	NM_004105.3	NM_004105.3		2202	86787911	NM_004105.3	EFEMP1	NP_004096.2	ILMN_1673880	0006250563	I	362	CTCTGGCGCTGGTCAAGTCACAGGACACCGAAGAAACCATCACGTACACG	2	-	56145402-56145402:56149495-56149543	2p16.1d	Homo sapiens EGF-containing fibulin-like extracellular matrix protein 1 (EFEMP1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10369267] [evidence TAS]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10369267] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12620389] [evidence IPI]	FBNL; MLVT; FLJ35535; FBLN3; DRAD; S1-5; MGC111353; DHRD; MTLV	FBNL; MLVT; FBLN3; DRAD; S1-5; MGC111353; DHRD
Homo sapiens	RefSeq	NM_172375.1	ILMN_21142	KCNH5	NM_172375.1	NM_172375.1		27133	27886645	NM_172375.1	KCNH5	NP_758963.1	ILMN_1729963	0003930528	A	1689	TGAACATCCTGCTTTTCGATTGGCCAGCGATGGGTGTCTGCGCGCCTTGG	14	-	63269181-63269230	14q23.2a-q23.2b	Homo sapiens potassium voltage-gated channel, subfamily H (eag-related), member 5 (KCNH5), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]	EAG2; H-EAG2; Kv10.2	EAG2; H-EAG2; Kv10.2
Homo sapiens	RefSeq	NM_005668.3	ILMN_172553	ST8SIA4	NM_005668.3	NM_005668.3		7903	38202228	NM_005668.3	ST8SIA4	NP_005659.1	ILMN_2253732	0004230017	I	5707	CAGTTTTCAGATTGTGGCTCCAGGCCTTGTGTTTCTCATTTAAGTAGCAC	5	-	100171084-100171133	5q21.1c	Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 (ST8SIA4), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [pmid 10766765] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9054414] [evidence TAS]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [pmid 10766765] [evidence TAS]	Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IEA]	PST1; MGC61459; SIAT8D; ST8SIA-IV; PST; MGC34450	MGC61459; ST8SIA-IV; PST; MGC34450; PST1; SIAT8D
Homo sapiens	RefSeq	NM_172348.1	ILMN_3332	IL4	NM_172348.1	NM_172348.1		3565	27477091	NM_172348.1	IL4	NP_758858.1	ILMN_1669174	0003840377	A	602	GCACAGCAGTTCCACAGGCACAAGCAGCTGATCCGATTCCTGAAACGGCT	5	+	132015502-132015551	5q31.1b	Homo sapiens interleukin 4 (IL4), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11418631] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10725748] [evidence TAS]; A defense response that is mediated by cells [goid 6968] [pmid 10725748] [evidence TAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 11971948] [evidence ISS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 11418631] [evidence TAS]; Any process that activates or increases the rate or extent of B cell proliferation [goid 30890] [evidence ISS]; An immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is typically orchestrated by the production of particular cytokines by T-helper 2 cells, most notably IL-4, IL-5, IL-10, and IL-13, resulting in enhanced production of certain antibody isotypes and other effects [goid 42092] [pmid 11676128] [evidence TAS]; Any process that activates or increases the rate or extent of activated T cell proliferation [goid 42104] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a Stat5 protein [goid 42523] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence ISS]; The chemical reactions and pathways resulting in the formation of CTGF, produced by human umbilical vein endothelial cells and by skin fibroblasts after activation with TGF-beta [goid 45189] [pmid 11967989] [evidence TAS]; Any process that modulates the frequency, rate or extent of isotype switching [goid 45191] [pmid 11418631] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45348] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgE isotypes [goid 48295] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of isotype switching to IgG isotypes [goid 48304] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence IEA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence ISS]	Interacting selectively with the interleukin-4 receptor [goid 5136] [pmid 11418631] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8266078] [evidence IPI]	MGC79402; BSF1; IL-4	MGC79402; BSF1; IL-4
Homo sapiens	RefSeq	NM_001009813.1	ILMN_14406	MEIS3	NM_001009813.1	NM_001009813.1		56917	57863278	NM_001009813.1	MEIS3	NP_001009813.1	ILMN_1779997	0006370711	A	1462	GTCCGGCCTCCGGGATCAGTGGGGATGAGTTTGAACTTGGAAGGAGAATG	19	-	52601558-52601595:52601957-52601968	19q13.32c	Homo sapiens Meis homeobox 3 (MEIS3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 17178831] [evidence IDA]	DKFZp547H236; MRG2	DKFZp547H236; MRG2
Homo sapiens	RefSeq	NM_001009813.1	ILMN_14406	MEIS3	NM_001009813.1	NM_001009813.1		56917	57863278	NM_001009813.1	MEIS3	NP_001009813.1	ILMN_2301677	0002370162	A	1600	TCCAGCTTCAGGACCCCACCTCCAAAGGCCCCTCTGCTCAATGCCTACCT	19	-	52598514-52598563	19q13.32c	Homo sapiens Meis homeobox 3 (MEIS3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 17178831] [evidence IDA]	DKFZp547H236; MRG2	DKFZp547H236; MRG2
Homo sapiens	RefSeq	NR_003572.2	ILMN_364545	RPL23AP53	NR_003572.2	NR_003572.2		644128	197383214	NR_003572.2	RPL23AP53		ILMN_3239263	0003930603	S	5413	CACTGTGTTCCACCGGCAATGAAAAGAGTTCTTGTTTTTCCTCCAGCAAT	8	-	158670-158719	8p23.3b	Homo sapiens ribosomal protein L23a pseudogene 53 (RPL23AP53), non-coding RNA.					
Homo sapiens	RefSeq	NM_183242.1	ILMN_26511	BTBD8	NM_183242.1	NM_183242.1		284697	34304112	NM_183242.1	BTBD8	NP_899065.1	ILMN_2049900	0002000347	S	1205	GCCTGATTATTGCTCATTCAGTTGGAGTGGAAAGTCTTTTTGCTGACTGC	1	+	92385363-92385412	1p22.1e	Homo sapiens BTB (POZ) domain containing 8 (BTBD8), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_024301.3	ILMN_173675	FKRP	NM_024301.3	NM_024301.3		79147	89941473	NM_024301.3	FKRP	NP_077277.1	ILMN_2368617	0002230189	A	2578	TTGCAGAGGAGGAAATGCTCAGAGCTCCGAGGTGCGGCTGTGGTCGAGAA	19	+	51952828-51952877	19q13.32b	Homo sapiens fukutin related protein (FKRP), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide [goid 9101] [evidence IEA]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [evidence IEA]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	LGMD2I; MGC2991; FLJ12576; MDC1C	LGMD2I; MGC2991; FLJ12576; MDC1C
Homo sapiens	RefSeq	XM_928242.1	ILMN_31156	LOC645203	XM_928242.1	XM_928242.1		645203	89031332	XM_928242.1	LOC645203	XP_933335.1	ILMN_1777343	0001850619	S	618	CCCTACAGAGGTGGCGAGCATGTAACACGGGCTTATTGAGACCCTCATAG	10	-	69974032-69974081	10q21.3d	PREDICTED: Homo sapiens similar to transmembrane protein 14C (LOC645203), mRNA.					
Homo sapiens	RefSeq	XM_931358.1	ILMN_34633	LOC643143	XM_931358.2	XM_931358.2		643143	113411651	XM_931358.2	LOC643143	XP_936451.1	ILMN_1656052	0001400608	S	181	ACACACTCTGAAGTAGGTCTCAGAAGACAAAAAGCTGAAATCAACTCATG	1	-	210465412-210465446:210465447-210465461	1q32.3b	PREDICTED: Homo sapiens hypothetical LOC643143 (LOC643143), mRNA.					
Homo sapiens	RefSeq	NM_001080402.1	ILMN_169051	CCDC61	NM_001080402.1	NM_001080402.1		729440	122937206	NM_001080402.1	CCDC61	NP_001073871.1	ILMN_2210298	0005550601	S	662	GGCTGGATGGCCAGAACACTCGGGACACCCGGGAGAATGAGATCTGGCAT	19	+	46511499-46511548	19q13.32a	Homo sapiens coiled-coil domain containing 61 (CCDC61), mRNA.					
Homo sapiens	RefSeq	NM_001025389.1	ILMN_13634	AMPD3	NM_001025389.1	NM_001025389.1		272	70906425	NM_001025389.1	AMPD3	NP_001020560.1	ILMN_1665307	0002810072	I	207	CCTGCTTGGTTTTAGAGGATTGCTCCTGTGGGTCACTTGAGGCAGGCTCC	11	+	10433448-10433497	11p15.4a	Homo sapiens adenosine monophosphate deaminase (isoform E) (AMPD3), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of AMP, adenosine monophosphate [goid 6196] [pmid 9291127] [evidence TAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [pmid 9291127] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	XR_018651.2	ILMN_178008	LOC646791	XR_018651.2	XR_018651.2		646791	169209233	XR_018651.2	LOC646791		ILMN_3283742	0005420162	M	1	ATGTCCTCTACGCTCCTGTGAGTAACTTGGCTCCGGGGGCTCCGCTCGCC				15q24.2a	PREDICTED: Homo sapiens misc_RNA (LOC646791), miscRNA.					
Homo sapiens	RefSeq	XR_018651.2	ILMN_178008	LOC646791	XR_018651.2	XR_018651.2		646791	169209233	XR_018651.2	LOC646791		ILMN_3207233	0002100328	A	61	CCGCCCGCCACCCAGGACCGCGCCGCCGGCCTCTGCCGCGAACAAACCCT				15q24.2a	PREDICTED: Homo sapiens misc_RNA (LOC646791), miscRNA.					
Homo sapiens	RefSeq	XM_001719406.1	ILMN_343174	LOC100131354	XM_001719406.1	XM_001719406.1		100131354	169162741	XM_001719406.1	LOC100131354	XP_001719458.1	ILMN_3285343	0000430370	M	2078	GTGTACAGGTCAACAAATGATGACACAGTGAACACCCCCATATGACCACC	1	+	204050645-204050694	1q32.1g	PREDICTED: Homo sapiens hypothetical LOC100131354 (LOC100131354), mRNA.					
Homo sapiens	RefSeq	XM_001719406.1	ILMN_343174	LOC100131354	XM_001719406.1	XM_001719406.1		100131354	169162741	XM_001719406.1	LOC100131354	XP_001719458.1	ILMN_3208833	0003130161	A	1825	AGGCTGATGTATCTGGAGGAACTTTGGTTGGGCTGGAGGCAACTTCTGCC	1	+	204050392-204050441	1q32.1g	PREDICTED: Homo sapiens hypothetical LOC100131354 (LOC100131354), mRNA.					
Homo sapiens	RefSeq	NM_181785.1	ILMN_19722	SLC46A3	NM_181785.2	NM_181785.2		283537	142350769	NM_181785.2	SLC46A3	NP_861450.1	ILMN_1658639	0002640324	S	2792	CTCCTTCCCATCTCATTTCTTACTGCCTTACGCTCATCCTGAGGTCCACC	13	-	28172532-28172581	13q12.3a	Homo sapiens solute carrier family 46, member 3 (SLC46A3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ42613; FKSG16; RP11-97E23.2	FKSG16
Homo sapiens	RefSeq	NM_018263.3	ILMN_7971	ASXL2	NM_018263.4	NM_018263.4		55252	153792779	NM_018263.4	ASXL2	NP_060733.4	ILMN_1698968	0000650075	S	6868	AGTCCGTTTAGAGAGCAAACCATATTGTGCCTCTTCATCTTGACCCAGGC	2	-	25962509-25962558	2p23.3b	Homo sapiens additional sex combs like 2 (Drosophila) (ASXL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1685; DKFZp686C1968; ASXH2; FLJ10898	KIAA1685; ASXH2; FLJ10898; DKFZp686C1968
Homo sapiens	RefSeq	XR_039164.1	ILMN_341933	LOC341965	XR_039164.1	XR_039164.1		341965	169207466	XR_039164.1	LOC341965		ILMN_3207548	0000050039	A	883	GGAAGTGAAGAGAAATGAACCCACCATGTTTTGGCCCTACAATCCTTCTG				14q32.2b	PREDICTED: Homo sapiens misc_RNA (LOC341965), miscRNA.					
Homo sapiens	RefSeq	XR_039164.1	ILMN_341933	LOC341965	XR_039164.1	XR_039164.1		341965	169207466	XR_039164.1	LOC341965		ILMN_3284063	0002190474	M	431	TGGTCTTTGAAGGGTGGCTTGCCGGCTATCAGATGAGTTTTGACACAGCC				14q32.2b	PREDICTED: Homo sapiens misc_RNA (LOC341965), miscRNA.					
Homo sapiens	RefSeq	NR_030630.1	ILMN_388180	MIR933	NR_030630.1	NR_030630.1		100126350	262206210	NR_030630.1	MIR933		ILMN_3308550	0003830424	S	2	TTGGGTCAGTTCAGAGGTCCTCGGGGCGCGCGTCGAGTCAGCCGTGTGCG				2q31.1g	Homo sapiens microRNA 933 (MIR933), microRNA.					
Homo sapiens	RefSeq	NM_031482.3	ILMN_1070	ATG10	NM_031482.3	NM_031482.3		83734	33589825	NM_031482.3	ATG10	NP_113670.1	ILMN_1748968	0000020050	S	1271	AATTTGCCTGTTTATGGTGGTGTGTTCCTGTAGTCCCAGCTCCCCAGGAG	5	+	81585982-81586031	5q14.2a	Homo sapiens ATG10 autophagy related 10 homolog (S. cerevisiae) (ATG10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent or non-covalent attachment of lipid moieties to an amino acid in a protein [goid 6497] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the covalent alteration of one or more amino acid residues within a protein [goid 31401] [evidence ISS]; A process by which one or more moieties of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target protein [goid 32446] [pmid 16963840] [evidence IDA]; The process by which cells digest parts of their own cytoplasm in response to the accumulation of misfolded proteins in the endoplasmic reticulum [goid 34263] [pmid 17256008] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	DKFZP586I0418; pp12616; APG10; APG10L; FLJ13954	DKFZP586I0418; pp12616; APG10; APG10L; FLJ13954
Homo sapiens	RefSeq	NR_002774.1	ILMN_8591	HTR7P	NR_002774.1	NR_002774.1		93164	84872054	NR_002774.1	HTR7P		ILMN_2164522	0002360278	S	1679	GTCTGCCTTCTTTCCGCCTTTGTCACTTTACCTACCATTTTTGGTCGGGC	12	+	13046313-13046362	12p13.1b	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 7 pseudogene (HTR7P) on chromosome 12.					
Homo sapiens	RefSeq	NM_014777.2	ILMN_364509	URB2	NM_014777.2	NM_014777.2		9816	197333810	NM_014777.2	URB2	NP_055592.2	ILMN_3249406	0001580433	S	5008	CTCGTCTTGGCTCAGTGGTTTGGTGTTCCCTCGTCTGCACTGGAAACTAC	1	+	229795341-229795390	1q42.13e	Homo sapiens URB2 ribosome biogenesis 2 homolog (S. cerevisiae) (URB2), mRNA.					
Homo sapiens	RefSeq	XM_001719341.1	ILMN_347544	LOC100129243	XM_001719341.1	XM_001719341.1		100129243	169162481	XM_001719341.1	LOC100129243	XP_001719393.1	ILMN_3267476	0006480463	M	198	GGCAGGCTAAACAAGTGTGGAGACATCAGCCCCAGATTTGATGTGCAAAG				1q41d	PREDICTED: Homo sapiens similar to hCG1994130 (LOC100129243), mRNA.					
Homo sapiens	RefSeq	NM_015130.1	ILMN_25527	TBC1D9	NM_015130.2	NM_015130.2		23158	139394667	NM_015130.2	TBC1D9	NP_055945.2	ILMN_1703891	0001400070	S	5145	GTATGCTCTATTTCCTGAATGGATGTGGAAATGAAAGCTAGCGCACCTGC	4	-	141761677-141761726	4q31.21a	Homo sapiens TBC1 domain family, member 9 (with GRAM domain) (TBC1D9), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	KIAA0882; MDR1	KIAA0882; MDR1
Homo sapiens	RefSeq	XM_371152.2	ILMN_37107	ZNF486	XM_371152.3	XM_371152.3		90649	113428139	XM_371152.3	ZNF486	XP_371152.3	ILMN_1805668	0003130544	A	3074	CATTGCACTCCAGCCTGGGCAATAAGAGTGAAACTCTGTCTCCAGGAAAA	19	+	20171476-20171525	19p12d	PREDICTED: Homo sapiens zinc finger protein 486 (ZNF486), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XR_042488.1	ILMN_340724	LOC646278	XR_042488.1	XR_042488.1		646278	169208733	XR_042488.1	LOC646278		ILMN_3250427	0004210086	I	550	CCCAGGCTCGCCTTGACACCGAATGGTTGAAAACAGATATACAGGTGGGG				15q13.1b	PREDICTED: Homo sapiens similar to programmed cell death 6 interacting protein (LOC646278), miscRNA.					
Homo sapiens	RefSeq	XR_042488.1	ILMN_340724	LOC646278	XR_042488.1	XR_042488.1		646278	169208733	XR_042488.1	LOC646278		ILMN_3249965	0006100608	A	114	AGCAAGTTTTTGACAGCCCTGGCTCAAGATGGCATGATAAATGAAGAAGC				15q13.1b	PREDICTED: Homo sapiens similar to programmed cell death 6 interacting protein (LOC646278), miscRNA.					
Homo sapiens	RefSeq	NM_152868.1	ILMN_164625	KCNJ4	NM_152868.1	NM_152868.1		3761	23110983	NM_152868.1	KCNJ4	NP_690607.1	ILMN_1800179	0000060398	A	1875	TGCCCTCTTTGCTCTCAGAACCTTGGGGAAGGTGGCTGGACTGCTGGGCG	22	-	38822470-38822519	22q13.1b	Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 4 (KCNJ4), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8051145] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8051145] [evidence TAS]	 [goid 5242] [pmid 8016146] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	IRK3; MGC142068; MGC142066; Kir2.3; HRK1; HIRK2; HIR	IRK3; MGC142068; MGC142066; Kir2.3; HRK1; HIRK2; HIR
Homo sapiens	RefSeq	NM_152868.1	ILMN_164625	KCNJ4	NM_152868.1	NM_152868.1		3761	23110983	NM_152868.1	KCNJ4	NP_690607.1	ILMN_1697620	0003370593	I	22	ACGCGCGGAGACCCCAAGACCCACGCGCAGACCGAGCGGCAGCCGGGGAG	22	-	38851132-38851181	22q13.1b	Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 4 (KCNJ4), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8051145] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8051145] [evidence TAS]	 [goid 5242] [pmid 8016146] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	IRK3; MGC142068; MGC142066; Kir2.3; HRK1; HIRK2; HIR	IRK3; MGC142068; MGC142066; Kir2.3; HRK1; HIRK2; HIR
Homo sapiens	RefSeq	NM_177476.1	ILMN_25013	LYNX1	NM_177476.2	NM_177476.2		66004	94538332	NM_177476.2	LYNX1	NP_803429.1	ILMN_1765614	0001190241	I	58	TGGCCTGGGCAAATGTGTCGTGAGAGACGGATTTGTTGTTCTCGGGAAGG	8	-	143858330-143858379	8q24.3e	Homo sapiens Ly6/neurotoxin 1 (LYNX1), transcript variant 4, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			MGC40364; SLURP2	MGC40364; SLURP2
Homo sapiens	RefSeq	NM_170705.1	ILMN_23287	ICMT	NM_170705.1	NM_170705.1		23463	24797155	NM_170705.1	ICMT	NP_733806.1	ILMN_1744500	0000460528	I	402	CAGTCCCTTGAGCCTTCTAGTCTGACCTGGATATGAACCAGTGGCTTCAA	1	-	6217052-6217101	1p36.31a	Homo sapiens isoprenylcysteine carboxyl methyltransferase (ICMT), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10441503] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9614111] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9614111] [evidence TAS]; The methylation of the C-terminal amino acid of a protein [goid 6481] [pmid 10441503] [evidence TAS]; The process of directing proteins towards a membrane using signals contained within the protein [goid 6612] [pmid 9614111] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-methionine + protein C-terminal S-farnesyl-L-cysteine = S-adenosyl-L-homocysteine + protein C-terminal S-farnesyl-L-cysteine methyl ester [goid 4671] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MST098; PCMT; PCCMT; PPMT; HSTE14; MSTP098; MGC39955	MST098; PCMT; PCCMT; PPMT; HSTE14; MSTP098; MGC39955
Homo sapiens	Unigene	Hs.266249	ILMN_83846	HS.266249	Hs.266249		Hs.266249		19600671	BM979825			ILMN_1827068	0001410100	S	141	ACAGACTAGCAAACTGAGGCACATGGAGGTGAAATCACTTGCCCAAAGCC	19	-	43514356-43514405		UI-CF-DU1-adt-f-12-0-UI.s1 UI-CF-DU1 Homo sapiens cDNA clone UI-CF-DU1-adt-f-12-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004208.2	ILMN_20381	AIFM1	NM_004208.2	NM_004208.2		9131	22202627	NM_004208.2	AIFM1	NP_004199.1	ILMN_1717357	0001940577	I	340	GGCTAGCTCTGGTGCATCAGGGGGCAAAATCGATAATTCTGTGTTAGTCC	X	-	129290472-129290521	Xq25h	Homo sapiens apoptosis-inducing factor, mitochondrion-associated, 1 (AIFM1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9989411] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9989411] [evidence TAS]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 9989411] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 9989411] [evidence TAS]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9989411] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	MGC111425; PDCD8; AIF	MGC111425; PDCD8; AIF
Homo sapiens	RefSeq	NM_052911.1	ILMN_10865	ESCO1	NM_052911.2	NM_052911.2		114799	116235477	NM_052911.2	ESCO1	NP_443143.2	ILMN_1682233	0002340750	S	4115	GGCTTTCCTTCTTGGAGAGCTGTAAATGACAAGCATTAGGAAAGGTACCC	18	-	19109596-19109645	18q11.2a	Homo sapiens establishment of cohesion 1 homolog 1 (S. cerevisiae) (ESCO1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	A930014I12Rik; MGC105022; ESO1; EFO1; KIAA1911	A930014I12Rik; MGC105022; ESO1; EFO1; KIAA1911
Homo sapiens	RefSeq	Hs.375029	ILMN_163001	FLJ33544	XM_001132687.1	XM_001132687.1		728283	113428935	XM_001132687.1	FLJ33544	XP_001132687.1	ILMN_1838357	0004920315	S	1894	ACCCTGAAGGTCTAAAAAGGTGTTCCCCATCGTTAAACCCCAGCCAGCGG				20p12.3c	PREDICTED: Homo sapiens hypothetical protein LOC728283 (FLJ33544), mRNA.					
Homo sapiens	RefSeq	NM_182585.1	ILMN_5038	DKFZP451M2119	NM_182585.1	NM_182585.1		285023	32698993	NM_182585.1	DKFZp451M2119	NP_872391.1	ILMN_1696318	0002260324	S	4897	TCTGACTTCATATCTGTGGGATCCACACAATGGGGAGGTACTGGCCTTGG	2	-	177856737-177856786		Homo sapiens hypothetical protein DKFZp451M2119 (DKFZp451M2119), mRNA.					
Homo sapiens	RefSeq	NM_001014434.1	ILMN_5517	LHX9	NM_001014434.1	NM_001014434.1		56956	62241032	NM_001014434.1	LHX9	NP_001014434.1	ILMN_1769385	0001030682	I	3	GTGATCCACTCCTTTTCCTCTAAGAATGCTGAACGGTACCACTCTAGAGG	1	+	196148260-196148284:196148285-196148309	1q31.3c-q31.3d	Homo sapiens LIM homeobox 9 (LHX9), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; The process whose specific outcome is the progression of the male gonad over time, from its formation to the mature structure [goid 8584] [evidence IEA]; The process whose specific outcome is the progression of the female gonad over time, from its formation to the mature structure [goid 8585] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_033506.1	ILMN_3577	FBXO24	NM_033506.1	NM_033506.1		26261	15812195	NM_033506.1	FBXO24	NP_277041.1	ILMN_1786304	0004040315	A	1854	TGAAGGAGATCGTAGGGTGGATGCCCCTGATGGCCGCACAGAAGGACTTC	7	+	100036331-100036380	7q22.1c	Homo sapiens F-box protein 24 (FBXO24), transcript variant 1, mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10531035] [evidence NAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 10531035] [evidence NAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 10531035] [evidence NAS]	FBX24; DKFZp434I1122	FBX24; DKFZp434I1122
Homo sapiens	RefSeq	NM_021928.1	ILMN_14718	SPCS3	NM_021928.1	NM_021928.1		60559	11345461	NM_021928.1	SPCS3	NP_068747.1	ILMN_1667707	0007050026	S	1413	TGCATGGTTTACCCTCTGAGTTATGTTTCTTCTAGTGAGCATGCCTGCTG	4	+	177487232-177487281	4q34.2a	Homo sapiens signal peptidase complex subunit 3 homolog (S. cerevisiae) (SPCS3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A multi subunit protease complex located in the endoplasmic reticulum membrane that cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space [goid 5787] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	DKFZp564J1864; SPC22/23; SPC3; FLJ22649; PRO3567; YLR066W	DKFZp564J1864; SPC22/23; SPC3; FLJ22649; PRO3567; YLR066W
Homo sapiens	RefSeq	NM_001024736.1	ILMN_176769	CD276	NM_001024736.1	NM_001024736.1		80381	67188442	NM_001024736.1	CD276	NP_001019907.1	ILMN_2365307	0005900575	A	3008	CCACGGCTAGAGAATCTGGTGGTGTCCAAAATGTCTGTCCAGGTGTGGGC	15	+	71793519-71793568	15q24.1b	Homo sapiens CD276 molecule (CD276), transcript variant 1, mRNA. XM_945872 XM_945874	The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [pmid 15188059] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 15188059] [evidence NAS]	The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11224528] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [evidence IEA]; Any process that activates or increases the rate or extent of T cell proliferation [goid 42102] [pmid 11224528] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of T cell proliferation [goid 42130] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45077] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interferon-gamma [goid 45078] [pmid 11224528] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-2 [goid 45085] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the inflammatory response [goid 50728] [evidence IEA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [evidence IEA]; Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus [goid 50776] [pmid 11224528] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 11224528] [evidence NAS]	B7-H3; B7H3	B7-H3; B7H3
Homo sapiens	RefSeq	NM_001986.1	ILMN_25435	ETV4	NM_001986.1	NM_001986.1		2118	24307882	NM_001986.1	ETV4	NP_001977.1	ILMN_1753830	0000070209	S	1862	AGGCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGC	17	-	38961026-38961075	17q21.31b	Homo sapiens ets variant gene 4 (E1A enhancer binding protein, E1AF) (ETV4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	E1A-F; PEA3; E1AF; PEAS3	E1A-F; PEA3; E1AF; PEAS3
Homo sapiens	RefSeq	XM_940794.1	ILMN_39256	LOC651612	XM_940794.1	XM_940794.1		651612	89039143	XM_940794.1	LOC651612	XP_945887.1	ILMN_1763823	0001580360	S	1742	CCTAGGCAATCCGCCCCAAGCATCCTTTCTGCTTTGTCTCCAGGAGTCTC					PREDICTED: Homo sapiens hypothetical protein LOC651612 (LOC651612), mRNA.					
Homo sapiens	RefSeq	NM_006151.1	ILMN_28648	LPO	NM_006151.1	NM_006151.1		4025	40549417	NM_006151.1	LPO	NP_006142.1	ILMN_1670767	0005290754	S	2580	CACTCAGCTCCAGTGGCTTCTCCTTTCTGTCAAGACTTAGCCCCGCTGAG	17	+	53700540-53700589	17q22d	Homo sapiens lactoperoxidase (LPO), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 8964511] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	MGC129990; MGC129991; SPO	MGC129990; MGC129991; SPO
Homo sapiens	RefSeq	NM_004049.2	ILMN_7951	BCL2A1	NM_004049.2	NM_004049.2		597	14574570	NM_004049.2	BCL2A1	NP_004040.1	ILMN_1769229	0007380477	S	563	TGAATAACACAGGAGAATGGATAAGGCAAAACGGAGGCTGGGAAAATGGC	15	-	78040561-78040571:78050097-78050135	15q25.1b	Homo sapiens BCL2-related protein A1 (BCL2A1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 8605321] [evidence TAS]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16697956] [evidence IPI]	GRS; ACC-1; HBPA1; BFL1; ACC-2; BCL2L5	GRS; ACC-1; HBPA1; BFL1; ACC-2; BCL2L5
Homo sapiens	RefSeq	NM_003764.2	ILMN_169605	STX11	NM_003764.2	NM_003764.2		8676	33667037	NM_003764.2	STX11	NP_003755.2	ILMN_1720771	0000060470	S	1469	TCCCTGGTTCTGTTCCATTTTGAGCGAAATTGGCCTTGGGAAAAACCACG	6	+	144550749-144550798	6q24.2b	Homo sapiens syntaxin 11 (STX11), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 9553086] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [pmid 9553086] [evidence TAS]	FHL4; HLH4; HPLH4	FHL4; HLH4; HPLH4
Homo sapiens	RefSeq	NM_005120.1	ILMN_24242	MED12	NM_005120.1	NM_005120.1		9968	4827041	NM_005120.1	MED12	NP_005111.1	ILMN_1793386	0000620504	S	6602	CTTTGGTCCGGCAACTTCAACAACAGCTCTCTAATACCCAGCCACAGCCC	X	+	70278829-70278872	Xq13.1c	Homo sapiens mediator of RNA polymerase II transcription, subunit 12 homolog (yeast) (MED12), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 10198638] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10235267] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 12218053] [evidence IDA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 12218053] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 12037571] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 12218053] [evidence IDA]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 10198638] [evidence IDA]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI];  [goid 30374] [pmid 10235266] [evidence NAS]; Interacting selectively with the vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes [goid 42809] [pmid 10235266] [evidence NAS]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 10198638] [evidence IDA]	TRAP230; HOPA; CAGH45; TNRC11; KIAA0192; OPA1	TRAP230; HOPA; CAGH45; TNRC11; KIAA0192; OPA1
Homo sapiens	RefSeq	XM_371164.3	ILMN_164089	WDR87	XM_371164.4	XM_371164.4		83889	113428239	XM_371164.4	WDR87	XP_371164.4	ILMN_1730646	0004050289	I	7935	TGCCCGGTATGGGATCTTAGAACTTGCCTGGAAGAGCCTGCCTGAAGCTG	19	-	43067461-43067510	19q13.13a	PREDICTED: Homo sapiens WD repeat domain 87 (WDR87), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XM_940478.1	ILMN_164089	WDR87	XM_371164.4	XM_371164.4		83889	113428239	XM_371164.4	WDR87	XP_371164.4	ILMN_1679728	0005560192	A	4212	ACAAGGTGTGACCCAAGAGGTGATCAGACACAAGGAAGTGATGCCAAGGG	19	-	43071997-43072046	19q13.13a	PREDICTED: Homo sapiens WD repeat domain 87 (WDR87), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XM_938515.1	ILMN_168769	LOC731159	XM_001128635.1	XM_001128635.1		731159	113424917	XM_001128635.1	LOC731159	XP_001128635.1	ILMN_1656123	0001010148	S	806	CCCAGCAGCTGCCCCAGAACCATGGAGAGTCTGAGTGAACTACAGAACCC					PREDICTED: Homo sapiens hypothetical protein LOC731159 (LOC731159), mRNA.					
Homo sapiens	RefSeq	NM_182802.1	ILMN_16074	MCM8	NM_182802.1	NM_182802.1		84515	33469923	NM_182802.1	MCM8	NP_877954.1	ILMN_1702221	0002140446	I	377	GAACTTTAGCCTTAGGAGATGTAAATAAAGTAGTATTTGAAGAAGCACAG	20	+	5879674-5879723	20p12.3c	Homo sapiens minichromosome maintenance complex component 8 (MCM8), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11125146] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15684404] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC4816; C20orf154; MGC12866; REC; MGC119523; dJ967N21.5; MGC119522	C20orf154; dJ967N21.5; MGC119522; MGC4816; MGC12866; REC; MGC119523
Homo sapiens	RefSeq	XM_926184.1	ILMN_39350	LOC642762	XM_926184.1	XM_926184.1		642762	88953317	XM_926184.1	LOC642762	XP_931277.1	ILMN_1691069	0001510132	S	205	CCCCGCCCAGACAGAATCTACACTGCCTGGGAGGCACAGAGTATCTTGGG	2	+	91392004-91392010:91392274-91392316	2p11.1d	PREDICTED: Homo sapiens similar to ATP-binding cassette sub-family D member 1 (Adrenoleukodystrophy protein) (ALDP) (LOC642762), mRNA.					
Homo sapiens	RefSeq	XR_018018.2	ILMN_173049	LOC641761	XR_018018.2	XR_018018.2		641761	169170487	XR_018018.2	LOC641761		ILMN_3236861	0004060689	S	62	GTGGGGTAGAGTGCATAGCCTGTAAATTACTCTCTGATGACTATGAACAA	7	+	64459233-64459249:64459442-64459474		PREDICTED: Homo sapiens misc_RNA (LOC641761), miscRNA.					
Homo sapiens	RefSeq	XR_040201.1	ILMN_343672	LOC644949	XR_040201.1	XR_040201.1		644949	169208792	XR_040201.1	LOC644949		ILMN_3209317	0007100438	A	1576	AAGTTAAATTTGTGTCAGGGTGCAGTGCCACACGCCTGTAATCCCAGCAC				15q15.1b	PREDICTED: Homo sapiens hypothetical LOC644949 (LOC644949), miscRNA.					
Homo sapiens	RefSeq	XR_040201.1	ILMN_343672	LOC644949	XR_040201.1	XR_040201.1		644949	169208792	XR_040201.1	LOC644949		ILMN_3285828	0006520719	M	1360	CGACCCAACTACCAGGATGTGTGGTGAGAATTGCCTAGGGTAAGGCCTAG				15q15.1b	PREDICTED: Homo sapiens hypothetical LOC644949 (LOC644949), miscRNA.					
Homo sapiens	RefSeq	XR_038621.1	ILMN_346605	LOC401602	XR_038621.1	XR_038621.1		401602	169217149	XR_038621.1	LOC401602		ILMN_3289074	0003610594	M	2731	TGGCCGAGCTACGTATGCAGCCAGGAAACCCCAATTATACACTGTCACGG				Xq21.32a	PREDICTED: Homo sapiens misc_RNA (LOC401602), miscRNA.					
Homo sapiens	RefSeq	XM_001726037.1	ILMN_346698	LOC100129908	XM_001726037.1	XM_001726037.1		100129908	169169573	XM_001726037.1	LOC100129908	XP_001726089.1	ILMN_3190019	0005310156	A	455	AGGGGCTCCCGCTCCAGGTTCCTTGAAGCACTTCCGACCGCGAAGCCCGG	6	+	53767827-53767852:53767853-53767876	6p12.1c	PREDICTED: Homo sapiens hypothetical protein LOC100129908 (LOC100129908), mRNA.					
Homo sapiens	RefSeq	NM_001134404.1	ILMN_364399	CYB561D1	NM_001134404.1	NM_001134404.1		284613	197304732	NM_001134404.1	CYB561D1	NP_001127876.1	ILMN_3180557	0004490612	A	4577	CACGCCTTGCAGTGACTTCTCGTCTGGGAGTGGGCACTGAGTCCTCTCAG	1	+	110042526-110042575	1p13.3b	Homo sapiens cytochrome b-561 domain containing 1 (CYB561D1), transcript variant 5, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XR_041124.1	ILMN_339725	LOC392242	XR_041124.1	XR_041124.1		392242	169173121	XR_041124.1	LOC392242		ILMN_3239408	0007560685	S	248	CTCCCTGCTGGTTCCCACCTGGATACCCAGAAACTAAGAAGGTGGCCGAG	8	-	86743885-86743934	8q21.2b	PREDICTED: Homo sapiens misc_RNA (LOC392242), miscRNA.					
Homo sapiens	RefSeq	XM_939353.1	ILMN_35935	LOC650261	XM_939353.1	XM_939353.1		650261	89030624	XM_939353.1	LOC650261	XP_944446.1	ILMN_1729635	0002060431	S	856	TCACTCAGAAGAGCAATAGGGAGAGGTGTGCGGGTGACAGGGGCGCTGCT					PREDICTED: Homo sapiens similar to NADPH dependent diflavin oxidoreductase 1 (LOC650261), mRNA.					
Homo sapiens	RefSeq	NM_181806.2	ILMN_5103	AASDH	NM_181806.2	NM_181806.2		132949	45580729	NM_181806.2	AASDH	NP_861522.2	ILMN_1784269	0004150561	S	3265	CTGGCAGCAGCATCTACTGATGGGAAAGTGTGGATCTTGGAATCTCAGAG	4	-	57204703-57204752	4q12d-q12e	Homo sapiens aminoadipate-semialdehyde dehydrogenase (AASDH), mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence ISS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Enables the directed movement of acyl groups into, out of, within or between cells [goid 36] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid and a thiol via a carbon-sulfur bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16878] [evidence ISS]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence IEA]	LYS2; ACSF4; NRPS1098; NRPS998	LYS2; ACSF4; NRPS1098; NRPS998
Homo sapiens	RefSeq	NM_020062.3	ILMN_11640	SLC2A4RG	NM_020062.3	NM_020062.3		56731	39777592	NM_020062.3	SLC2A4RG	NP_064446.2	ILMN_1740430	0002070243	S	2037	CACAGAGAGGCAGGACGGCAGAGCCATGATTTCCCACCGAGCGATTACGA	20	+	61845605-61845654	20q13.33e	Homo sapiens SLC2A4 regulator (SLC2A4RG), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10825161] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10825161] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10825161] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	GEF; Si-1-2; Si-1-2-19; HDBP1	GEF; Si-1-2; Si-1-2-19; HDBP1
Homo sapiens	RefSeq	NM_007357.1	ILMN_24632	COG2	NM_007357.1	NM_007357.1		22796	6678675	NM_007357.1	COG2	NP_031383.1	ILMN_1776993	0006550647	S	2745	GAGAACTCCTGGGCTTTCTAAAGAGGCTGCGGGAAGCCATCCTCCACTCC	1	+	228896195-228896244	1q42.2a	Homo sapiens component of oligomeric golgi complex 2 (COG2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 7962052] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p) [goid 17119] [pmid 15047703] [evidence IDA]; A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p) [goid 17119] [pmid 7962052] [evidence IMP]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 7962052] [evidence TAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [pmid 7962052] [evidence TAS]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 7962052] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the Golgi apparatus [goid 7030] [pmid 7962052] [evidence IMP]; The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [pmid 7962052] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15047703] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 7962052] [evidence IMP]	LDLC	LDLC
Homo sapiens	RefSeq	NM_001002860.2	ILMN_178877	BTBD7	NM_001002860.2	NM_001002860.2		55727	58532586	NM_001002860.2	BTBD7	NP_001002860.2	ILMN_1687743	0001780403	I	7953	GCGGTACCAAGTCCTGCTCTTCGATGGGGTGGCTGAGAGATAAAGGTTCC	14	-	93704341-93704390	14q32.12b-q32.13a	Homo sapiens BTB (POZ) domain containing 7 (BTBD7), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DKFZp686N0544; FUP1; MGC48310	DKFZp686N0544; FUP1; MGC48310
Homo sapiens	Unigene	Hs.571481	ILMN_123662	HS.571481	Hs.571481		Hs.571481		51665310	CR740913			ILMN_1915816	0000020682	S	539	GCTCCAGAGGGAGGAGGAAGAAGAGAAAAGAGAAGTCTCAACCAGCCTCC	8	+	25600409-25600458		CR740913 Soares_testis_NHT Homo sapiens cDNA clone IMAGp971H2144 ; IMAGE:727364 5, mRNA sequence					
Homo sapiens	RefSeq	NM_017729.2	ILMN_25455	EPS8L1	NM_017729.3	NM_017729.3		54869	148539854	NM_017729.3	EPS8L1	NP_060199.3	ILMN_1681193	0005690544	I	18	GGGACCTGGGAAGGAAGTTCTGGAAGGCAGTGGGGTTTGAGATTGGACCC	19	+	55591777-55591826	19q13.42b	Homo sapiens EPS8-like 1 (EPS8L1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DRC3; MGC23164; PP10566; MGC4642; EPS8R1; FLJ20258	DRC3; PP10566; EPS8R1; FLJ20258; MGC23164; MGC4642
Homo sapiens	RefSeq	NM_006491.2	ILMN_15951	NOVA1	NM_002515.2	NM_002515.2		4857	56549652	NM_002515.2	NOVA1	NP_002506.2	ILMN_1721968	0002630717	A	707	CAGAACCAGTCAGCATTCTACAACCCCAGACCACCGTTAATCCAGATCGC	14	-	26949191-26949240	14q12b	Homo sapiens neuro-oncological ventral antigen 1 (NOVA1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8558240] [evidence TAS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [pmid 8558240] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 8398153] [evidence TAS]	Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	Nova-1	Nova-1
Homo sapiens	RefSeq	NM_139175.1	ILMN_18338	RNF133	NM_139175.1	NM_139175.1		168433	21040268	NM_139175.1	RNF133	NP_631914.1	ILMN_1710026	0002140328	S	1069	TCCACAAGAATTGCATTGACCCCTGGATTTTACCCCATGGGACATGCCCC	7	-	122338090-122338139	7q31.32a	Homo sapiens ring finger protein 133 (RNF133), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC27072	MGC27072
Homo sapiens	RefSeq	XM_941061.1	ILMN_138859	SLCO3A1	XM_941061.1	XM_941061.1		28232	89039265	XM_941061.1	SLCO3A1	XP_946154.1	ILMN_1706261	0001440348	I	1970	GAGTAGGCATCTTTCCTGGGTCTCTAAAGAGTCATGCTGACCTGGTGTGC				15q26.1d	PREDICTED: Homo sapiens solute carrier organic anion transporter family, member 3A1, transcript variant 2 (SLCO3A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Homo sapiens	RefSeq	NR_002164.1	ILMN_14548	GTF2IRD2P	NR_002164.1	NR_002164.1		401375	51241786	NR_002164.1	GTF2IRD2P		ILMN_1746403	0006770201	S	2605	AACGCGATGGAGAGAAAACTCCTGGCAGGGCCCTATGGTGGGAAAGGCTG	7	-	72657257-72657306	7q11.23a	Homo sapiens GTF2I repeat domain containing 2 pseudogene (GTF2IRD2P), non-coding RNA.					
Homo sapiens	RefSeq	NR_002164.1	ILMN_14548	GTF2IRD2P	NR_002164.1	NR_002164.1		401375	51241786	NR_002164.1	GTF2IRD2P		ILMN_2088234	0000060050	S	2945	CCTCACAAAGTGCTGGGATTACAGGCATGAACCACTGTGCCCAGCTGACG	7	-	72656917-72656966	7q11.23a	Homo sapiens GTF2I repeat domain containing 2 pseudogene (GTF2IRD2P), non-coding RNA.					
Homo sapiens	RefSeq	NM_014966.2	ILMN_18565	DHX30	NM_014966.2	NM_014966.2		22907	20336289	NM_014966.2	DHX30	NP_055781.2	ILMN_2403555	0006110608	A	3670	AGCTGGCTGCACTTCCCCCCAGCGTACAGGAGGAGCACGGGCAGCTGCTT	3	+	47866496-47866545	3p21.31f	Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 30 (DHX30), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0890; FLJ11214; Ret-CoR; DDX30	KIAA0890; FLJ11214; Ret-CoR; DDX30
Homo sapiens	RefSeq	NM_144773.2	ILMN_7513	PROKR2	NM_144773.2	NM_144773.2		128674	30581162	NM_144773.2	PROKR2	NP_658986.1	ILMN_2043553	0001070747	S	1017	CACCATGAAGTACTTCAAGAAGATGATGCTGCTGCACTGGCGTCCCTCCC	20	-	5282774-5282823	20p12.3c	Homo sapiens prokineticin receptor 2 (PROKR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with neuropeptide Y to initiate a change in cell activity [goid 4983] [evidence IEA]	PKR2; GPR73L1; GPR73b; KAL3; dJ680N4.3; GPRg2	PKR2; GPR73L1; GPR73b; KAL3; dJ680N4.3; GPRg2
Homo sapiens	RefSeq	XM_929414.1	ILMN_42338	LOC653751	XM_929414.1	XM_929414.1		653751	89037408	XM_929414.1	LOC653751	XP_934507.1	ILMN_1652144	0001510709	S	241	GCAAGGACAGAAGCCCACACAGGGGTCTTTTGGGTCATGAGGCCCAGCTG	14	+	68888991-68889026:68889027-68889040		PREDICTED: Homo sapiens similar to UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1 (LOC653751), mRNA.					
Homo sapiens	RefSeq	NM_001001958.1	ILMN_166167	OR7G3	NM_001001958.1	NM_001001958.1		390883	50080200	NM_001001958.1	OR7G3	NP_001001958.1	ILMN_1797878	0007040725	S	758	GAACAGGGTTTGGGGTGTACCTTAGTTCTGGGGCTACCCACTCCTCCAGG	19	-	9236819-9236868	19p13.2d	Homo sapiens olfactory receptor, family 7, subfamily G, member 3 (OR7G3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OST085	OST085
Homo sapiens	RefSeq	NM_031942.3	ILMN_33249	CDCA7	NM_031942.4	NM_031942.4		83879	88999585	NM_031942.4	CDCA7	NP_114148.3	ILMN_1762142	0007400301	I	420	CCAGATGTCACTAACGAACTGGCCGGTATTTTTCATGCCGACTCTGACGA	2	+	173932370-173932419	2q31.1e	Homo sapiens cell division cycle associated 7 (CDCA7), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11598121] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 11598121] [evidence IDA]		MGC34109; JPO1; FLJ14736; FLJ14722	MGC34109; JPO1; FLJ14736; FLJ14722
Homo sapiens	RefSeq	NM_145810.1	ILMN_33249	CDCA7	NM_031942.4	NM_031942.4		83879	88999585	NM_031942.4	CDCA7	NP_114148.3	ILMN_1737184	0002070520	A	2475	CTCTGCCAGTCTAGTTTCTGGGCAGGTTTCCTGTGTCAGTATTCCCCCTC	2	+	173941629-173941678	2q31.1e	Homo sapiens cell division cycle associated 7 (CDCA7), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11598121] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 11598121] [evidence IDA]		MGC34109; JPO1; FLJ14736; FLJ14722	MGC34109; JPO1; FLJ14736; FLJ14722
Homo sapiens	RefSeq	NM_003899.2	ILMN_29199	ARHGEF7	NM_003899.2	NM_003899.2		8874	22027526	NM_003899.2	ARHGEF7	NP_003890.1	ILMN_1796912	0000510554	I	4824	CTGGGCGTCTGGGACCTTGAATGCCTGCCCTGGTTGTGTGGACTCCTTAA	13	+	110755871-110755920	13q34b	Homo sapiens Rho guanine nucleotide exchange factor (GEF) 7 (ARHGEF7), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16407834] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14505571] [evidence EXP]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	KIAA0412; P50BP; BETA-PIX; PIXB; COOL1; PAK3; KIAA0142; P85SPR; P85COOL1; P85; P50; DKFZp761K1021; Nbla10314	KIAA0412; P50BP; BETA-PIX; PIXB; COOL1; PAK3; KIAA0142; P85SPR; P85COOL1; P85; P50; DKFZp761K1021; Nbla10314
Homo sapiens	RefSeq	NM_003899.2	ILMN_29199	ARHGEF7	NM_003899.2	NM_003899.2		8874	22027526	NM_003899.2	ARHGEF7	NP_003890.1	ILMN_1675984	0002320445	A	1963	AGAGCCCTAAGACCATGAAAAAGCTGCTGCCCAAGCGCAAACCTGAACGG	13	+	110736505-110736554	13q34b	Homo sapiens Rho guanine nucleotide exchange factor (GEF) 7 (ARHGEF7), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16407834] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14505571] [evidence EXP]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	KIAA0412; P50BP; BETA-PIX; PIXB; COOL1; PAK3; KIAA0142; P85SPR; P85COOL1; P85; P50; DKFZp761K1021; Nbla10314	KIAA0412; P50BP; BETA-PIX; PIXB; COOL1; PAK3; KIAA0142; P85SPR; P85COOL1; P85; P50; DKFZp761K1021; Nbla10314
Homo sapiens	RefSeq	NM_025252.3	ILMN_7647	RAPH1	NM_025252.3	NM_025252.3		65059	47132517	NM_025252.3	RAPH1	NP_079528.1	ILMN_1718405	0004280398	I	2220	GCTCTCTTATGTCTTTATCGGGGATCTTATTTGGCCTTATTTCAGTCTCC	2	-	204017723-204017772	2q33.2a	Homo sapiens Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 (RAPH1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		ALS2CR9; PREL2; RalGDS/AF-6; LPD; ALS2CR18; RMO1; KIAA1681	ALS2CR9; PREL2; RalGDS/AF-6; LPD; ALS2CR18; RMO1; KIAA1681
Homo sapiens	RefSeq	NR_026881.1	ILMN_387218	PRG1	NR_026881.1	NR_026881.1		23574	223718008	NR_026881.1	PRG1		ILMN_3310146	0004180594	S	395	CACACAGCCTCCTCCATGGCTTACCTCACACAGCAGTTGTTAATTAGCCA	19	+	43853602-43853651		Homo sapiens p53-responsive gene 1 (PRG1), non-coding RNA.					
Homo sapiens	RefSeq	NM_153374.1	ILMN_19682	LYSMD2	NM_153374.1	NM_153374.1		256586	23503312	NM_153374.1	LYSMD2	NP_699205.1	ILMN_1724493	0000770538	S	1345	GGCATGATGGCAAGGTTGTAGCCTAAAGCTCATCACTTTTGTAGGTGGTG	15	-	49802846-49802895	15q21.2b	Homo sapiens LysM, putative peptidoglycan-binding, domain containing 2 (LYSMD2), mRNA.		The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]		MGC35274; DKFZp686I2243	MGC35274; DKFZp686I2243
Homo sapiens	RefSeq	XM_001715413.1	ILMN_343612	FLJ46446	XM_001715413.1	XM_001715413.1		441501	169217111	XM_001715413.1	FLJ46446	XP_001715465.1	ILMN_3262976	0004490377	M	413	GGATGTTGGGGTGGCAGGCACTTGCAGATGGCTCTGTGCTGCCACCCGAC				Xq13.1d	PREDICTED: Homo sapiens hypothetical gene supported by AK128305 (FLJ46446), mRNA.					
Homo sapiens	Unigene	Hs.546837	ILMN_109430	HS.546837	Hs.546837		Hs.546837		5934131	AW058492			ILMN_1908650	0006900121	S	354	CAGTGTCCAGTCAGGCATGAGGCTGTCAGGAGCGATGTATCTTCACCACG	15	+	78427164-78427180:78477341-78477373		wx21f03.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2544317 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001716125.1	ILMN_350471	LOC100130054	XM_001716125.1	XM_001716125.1		100130054	169178931	XM_001716125.1	LOC100130054	XP_001716177.1	ILMN_3270859	0007400441	M	697	GCACAAAGCCTTGTAGTTTGCAAAGCCCTCTCCGCACATGTATTCTCCAG				9q21.11b	PREDICTED: Homo sapiens hypothetical LOC100130054 (LOC100130054), mRNA.					
Homo sapiens	RefSeq	XM_001716125.1	ILMN_350471	LOC100130054	XM_001716125.1	XM_001716125.1		100130054	169178931	XM_001716125.1	LOC100130054	XP_001716177.1	ILMN_3194394	0006370114	A	411	AGGCTCGGCTTGGTTTTCCTACCCGCTCCTCAGTTCTGGTTGATCGGAAC				9q21.11b	PREDICTED: Homo sapiens hypothetical LOC100130054 (LOC100130054), mRNA.					
Homo sapiens	RefSeq	NM_181492.1	ILMN_25080	TCF20	NM_181492.1	NM_181492.1		6942	31652241	NM_181492.1	TCF20	NP_852469.1	ILMN_1660144	0000580280	A	5218	CAGAGTCTTCGGTTATGGGGCACCTGGTTTGCTGTCTGTGTGGCAAGTGG	22	-	42606178-42606227	22q13.2b	Homo sapiens transcription factor 20 (AR1) (TCF20), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10995766] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10995766] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10995766] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10995766] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AR1; KIAA0292; SPBP	AR1; KIAA0292; SPBP
Homo sapiens	RefSeq	XM_935478.1	ILMN_25080	TCF20	NM_181492.1	NM_181492.1		6942	31652241	NM_181492.1	TCF20	NP_852469.1	ILMN_1789103	0006960082	A	5710	TTCTCTGGGCCAATGGAATCTACCTGGTTTGTGGCAGGCTCTATGGCCTG	22	-	42605686-42605735	22q13.2b	Homo sapiens transcription factor 20 (AR1) (TCF20), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10995766] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10995766] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10995766] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10995766] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AR1; KIAA0292; SPBP	
Homo sapiens	RefSeq	NM_181492.1	ILMN_25080	TCF20	NM_181492.1	NM_181492.1		6942	31652241	NM_181492.1	TCF20	NP_852469.1	ILMN_2368068	0003450707	A	6913	GAGGGACTGTCGCTGTGATCAGAGTGGGTTAAGCTGACCAGGAACACCCA	22	-	42556335-42556384	22q13.2b	Homo sapiens transcription factor 20 (AR1) (TCF20), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10995766] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10995766] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10995766] [evidence NAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10995766] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AR1; KIAA0292; SPBP	AR1; KIAA0292; SPBP
Homo sapiens	Unigene	Hs.14032	ILMN_71366	HS.14032	Hs.14032		Hs.14032		19029009	BM715751			ILMN_1902630	0002470056	S	730	AGGGTCTCCTCCCCATGGCGGCAGAGCTGTCTGGCGTTTTGAGCCCTTTA	14	+	101485212-101485259		UI-E-EJ0-ahj-a-16-0-UI.r2 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahj-a-16-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_138933.1	ILMN_7300	A1CF	NM_014576.2	NM_014576.2		29974	20357571	NM_014576.2	A1CF	NP_055391.2	ILMN_1806310	0002650615	A	1893	GAGGTCTACCCAACTTTTGCAGTGACTGCCCGAGGGGATGGATATGGCAC	10	-	52566495-52566544	10q11.23c	Homo sapiens APOBEC1 complementation factor (A1CF), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12881431] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Protein complex that mediates editing of the mRNA encoding apolipoprotein B; catalyzes the deamination of C to U (residue 6666 in the human mRNA). Contains a catalytic subunit, APOBEC-1, and other proteins (e.g. human ASP; rat ASP and KSRP) [goid 30895] [pmid 10781591] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation [goid 50821] [pmid 12881431] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 11871661] [evidence IDA]; Interacting selectively with single-stranded RNA [goid 3727] [pmid 11871661] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12896982] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10669759] [evidence IPI]	ASP; APOBEC1CF; ACF65; ACF64; RP11-564C4.2; MGC163391; ACF	ASP; APOBEC1CF; ACF65; ACF64; RP11-564C4.2; MGC163391; ACF
Homo sapiens	RefSeq	NM_016257.2	ILMN_25356	HPCAL4	NM_016257.2	NM_016257.2		51440	19913444	NM_016257.2	HPCAL4	NP_057341.1	ILMN_1736976	0005220524	S	4135	CCCTGGGTGAGGCTTTGAGCTGACTTTAGAGATCACTGTGGGGTCAAGAA	1	-	40144719-40144768	1p34.2d	Homo sapiens hippocalcin like 4 (HPCAL4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]	The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 10520747] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10520747] [evidence TAS]	DKFZp761G122; HLP4	DKFZp761G122; HLP4
Homo sapiens	RefSeq	NM_080588.1	ILMN_21189	PTPN7	NM_080588.1	NM_080588.1		5778	18375659	NM_080588.1	PTPN7	NP_542155.1	ILMN_2257223	0003180671	I	409	ATGAGGCCACCTCTTGGGGAACAGAAGACGCCCCAGTGAAAACAGAGTGC	1	-	202128661-202128710	1q32.1c	Homo sapiens protein tyrosine phosphatase, non-receptor type 7 (PTPN7), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7545170] [evidence TAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1530918] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 1530918] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	BPTP-4; LC-PTP; LPTP; HEPTP; PTPNI	BPTP-4; LC-PTP; LPTP; HEPTP; PTPNI
Homo sapiens	RefSeq	NM_080588.1	ILMN_21189	PTPN7	NM_080588.1	NM_080588.1		5778	18375659	NM_080588.1	PTPN7	NP_542155.1	ILMN_1715214	0003610082	A	2994	CTTCCTTACAGCCTTGGGGATGGACTTGCCCACACCTCCACCTCCCCTGA	1	-	202116362-202116411	1q32.1c	Homo sapiens protein tyrosine phosphatase, non-receptor type 7 (PTPN7), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7545170] [evidence TAS]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 1530918] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 1530918] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	BPTP-4; LC-PTP; LPTP; HEPTP; PTPNI	BPTP-4; LC-PTP; LPTP; HEPTP; PTPNI
Homo sapiens	Unigene	Hs.575895	ILMN_128076	HS.575895	Hs.575895		Hs.575895		81459507	DB037089			ILMN_1886656	0000540739	S	445	GGTTGCAGTGAGGAAGAACACACACCTTGAGGAAGAATGGGCTGCCTCGG	1	-	178742043-178742092		DB037089 TESTI2 Homo sapiens cDNA clone TESTI2023005 5, mRNA sequence					
Homo sapiens	RefSeq	XM_938041.1	ILMN_34590	LOC648963	XM_938041.1	XM_938041.1		648963	89028509	XM_938041.1	LOC648963	XP_943134.1	ILMN_1809820	0001260121	S	5816	GTGACCAAGATCCAGGACAGAGTGATGGGGCCGAAGAAGATGTAGATGCC					PREDICTED: Homo sapiens similar to retinitis pigmentosa 1-like 1 (LOC648963), mRNA.					
Homo sapiens	RefSeq	XR_040612.1	ILMN_339668	LOC654780	XR_040612.1	XR_040612.1		654780	169210023	XR_040612.1	LOC654780		ILMN_3281342	0004850240	M	1097	AGACACCTGGTAGATGCCACCCTAGTCAAATCCCCACAGCTCGCATCGCC	16	-	82784635-82784684	16q24.1a	PREDICTED: Homo sapiens misc_RNA (LOC654780), miscRNA.					
Homo sapiens	RefSeq	NM_144723.1	ILMN_20495	ZMAT2	NM_144723.1	NM_144723.1		153527	21389510	NM_144723.1	ZMAT2	NP_653324.1	ILMN_1745343	0001980500	S	1201	GCATTGCTGCCCTGGGGCCTGATGTTCTTGGCTTCCTCAGAGCATGTAAC	5	+	140066112-140066161	5q31.3b	Homo sapiens zinc finger, matrin type 2 (ZMAT2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ31121	FLJ31121
Homo sapiens	RefSeq	NM_017762.1	ILMN_26014	MTMR10	NM_017762.1	NM_017762.1		54893	8923296	NM_017762.1	MTMR10	NP_060232.1	ILMN_1811064	0006900112	S	1968	CTAGGGAGCGGGAAACCTGAGTTCTGGCCCTGGTCTGGGAAAAGTGCTAG	15	-	29025903-29025952	15q13.3a	Homo sapiens myotubularin related protein 10 (MTMR10), mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	FLJ20313	FLJ20313
Homo sapiens	RefSeq	NM_020128.1	ILMN_2846	MDM1	NM_020128.1	NM_020128.1		56890	9910417	NM_020128.1	MDM1	NP_064513.1	ILMN_1655245	0007150241	I	1273	GGCAGGAGAAGGGGTGTTCATAGAAGCAGTGTGCAGGTGAGGCAAAGTGC	12	-	67005937-67005986	12q15b	Homo sapiens Mdm4, transformed 3T3 cell double minute 1, p53 binding protein (mouse) (MDM1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	RefSeq	NM_020128.1	ILMN_2846	MDM1	NM_020128.1	NM_020128.1		56890	9910417	NM_020128.1	MDM1	NP_064513.1	ILMN_1674508	0001740082	A	1724	TGTTTGGAAGACTTCTAAAGAAACTGCTCCAGCTTTTGCAGCCAATCAGG	12	-	67005486-67005535	12q15b	Homo sapiens Mdm4, transformed 3T3 cell double minute 1, p53 binding protein (mouse) (MDM1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]				
Homo sapiens	RefSeq	NM_145697.1	ILMN_17725	CDCA1	NM_145697.1	NM_145697.1		83540	22027506	NM_145697.1	CDCA1	NP_663735.1	ILMN_1802951	0006980202	I	225	TGTTTTCGTCGTGCTCAGCGGTGGGAGGAGGCGGAAGAAACCAGAGCCTG	1	+	161558573-161558622	1q23.3c	Homo sapiens cell division cycle associated 1 (CDCA1), transcript variant 1, mRNA.				NUF2R	NUF2R
Homo sapiens	RefSeq	NM_001002755.1	ILMN_9748	NFU1	NM_001002755.1	NM_001002755.1		27247	50593020	NM_001002755.1	NFU1	NP_001002755.1	ILMN_2406468	0006380291	A	635	GCATCTGGCTTACCCCTGGTTACTGAGGAAACACCTTCAGGAGAAGCAGG	2	-	69633213-69633214:69642317-69642364	2p14a	Homo sapiens NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) (NFU1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12886008] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12886008] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12886008] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12915448] [evidence IDA]	The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster [goid 16226] [pmid 12886008] [evidence IDA]	Interacting selectively with iron (Fe) ions [goid 5506] [pmid 12886008] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11342215] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12915448] [evidence IPI]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [pmid 12886008] [evidence IDA]	NifU; MGC142252; CGI-33; HIRIP5; NIFUC; Nfu; MGC142254	NifU; MGC142252; CGI-33; HIRIP5; NIFUC; Nfu; MGC142254
Homo sapiens	RefSeq	NM_198564.2	ILMN_43250	DNAH12L	NM_198564.2	NM_198564.2		375347	89274172	NM_198564.2	DNAH12L	NP_940966.2	ILMN_2134416	0006110707	S	1350	GGGCTGTTGATACACTGAAGGCAGCAGTACATCGGAACTTAGAAGGTGCA	3	-	57463111-57463160	3p14.3b-p14.3a	Homo sapiens dynein, axonemal, heavy chain 12-like (DNAH12L), mRNA.				DNAH7L; FLJ44290	DNAH7L; FLJ44290
Homo sapiens	RefSeq	XM_946202.1	ILMN_139339	LAD1	XM_946202.1	XM_946202.1		3898	88952631	XM_946202.1	LAD1	XP_951295.1	ILMN_1750798	0001510491	I	1421	CATGCCTCGCTGCTGCCAAGGGCCCTAAACCCTGAGATGGAAAGTTCTCT				1q32.1c	PREDICTED: Homo sapiens ladinin 1, transcript variant 5 (LAD1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9119369] [evidence TAS]		
Homo sapiens	RefSeq	NM_001077665.1	ILMN_179425	CTGLF3	NM_001077665.1	NM_001077665.1		414189	117940052	NM_001077665.1	CTGLF3	NP_001071133.1	ILMN_2209578	0000770424	S	2298	CCTTCTGCCAAGGTGGATTTGTTAGTCTCAGGCCCTCCTGGCCACATTGC				10q11.23b	Homo sapiens centaurin, gamma-like family, member 3 (CTGLF3), mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	bA324H6.1	bA324H6.1
Homo sapiens	RefSeq	XM_931307.1	ILMN_34166	LOC643094	XM_931307.1	XM_931307.1		643094	88972229	XM_931307.1	LOC643094	XP_936400.1	ILMN_1813339	0001170128	S	241	GCCTCTCGGTGTCCTCGGAGACCGGAGAACCGCTTGCGCGGAGCCCCGAC	4	-	2012921-2012970		PREDICTED: Homo sapiens hypothetical protein LOC643094 (LOC643094), mRNA.					
Homo sapiens	RefSeq	NM_016217.2	ILMN_3008	HECA	NM_016217.2	NM_016217.2		51696	66933006	NM_016217.2	HECA	NP_057301.1	ILMN_1770667	0000610367	S	5260	TCATTGGAGGTTGGGAAGGAAGTGAGGAGAAAGTGTTCTTGTTTAGTGTT	6	+	139501029-139501078	6q24.1a	Homo sapiens headcase homolog (Drosophila) (HECA), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [pmid 11696983] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HDC; HDCL; dJ225E12.1; HHDC	HDC; HDCL; dJ225E12.1; HHDC
Homo sapiens	RefSeq	XM_001724449.1	ILMN_339001	LOC100129412	XM_001724449.1	XM_001724449.1		100129412	169162668	XM_001724449.1	LOC100129412	XP_001724501.1	ILMN_3181221	0000150168	A	241	ACCCCCAGAGCTGGAGCCACAGCTTCCCCCAGAGCTGGAGCCACAGCAGC	1	-	151051694-151051743	1q21.3b	PREDICTED: Homo sapiens hypothetical protein LOC100129412 (LOC100129412), mRNA.					
Homo sapiens	RefSeq	NM_173687.1	ILMN_15334	C8ORF31	NM_173687.2	NM_173687.2		286122	142384979	NM_173687.2	C8orf31	NP_775958.1	ILMN_1790751	0002450142	S	1488	GGACGTCTGGTTTCTGCTGGGCTGCCCTCTCATGGGAAGCCTTTAATCAC	8	+	144135333-144135382	8q24.3f	Homo sapiens chromosome 8 open reading frame 31 (C8orf31), mRNA.				MGC90155; FLJ37131	MGC90155; FLJ37131
Homo sapiens	RefSeq	NM_001005417.1	ILMN_1293	B4GALT2	NM_001005417.1	NM_001005417.1		8704	53759112	NM_001005417.1	B4GALT2	NP_001005417.1	ILMN_1680732	0002640435	I	6	CTGGCCTGCTTGTCGCTGGGATCTGAATGACCAAACCACTTCCCACCATG	1	+	44218775-44218824	1p34.1f	Homo sapiens UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (B4GALT2), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminylglycopeptide [goid 3831] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetyl-D-glucosamine = UDP + N-acetyllactosamine [goid 3945] [evidence IEA]; Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose [goid 4461] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 9405390] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	beta4Gal-T2; B4Gal-T2; B4Gal-T3	beta4Gal-T2; B4Gal-T2; B4Gal-T3
Homo sapiens	RefSeq	XM_001126140.1	ILMN_162530	LOC727846	XM_001126140.1	XM_001126140.1		727846	113416813	XM_001126140.1	LOC727846	XP_001126140.1	ILMN_3292747	0001190161	M	748	GGGAGCTGGCATTGGAATAGGCTTCTTCGCCTGCTCGGTGTCAAGACCCC	5	+	157030576-157030625	5q33.3b	PREDICTED: Homo sapiens hypothetical LOC727846 (LOC727846), mRNA.					
Homo sapiens	RefSeq	NM_145039.2	ILMN_165884	LOC728006	XM_001128698.1	XM_001128698.1		728006	113426238	XM_001128698.1	LOC728006	XP_001128698.1	ILMN_1692072	0006350075	S	948	GGCCTCCCTGCTCTGTGGTGTTGGACATCCCTGGAAACCTTGCTGTTGGT	16	-	88563758-88563807	16q24.3b	PREDICTED: Homo sapiens hypothetical protein LOC728006 (LOC728006), mRNA.					FLJ31569; FLJ23771; MGC13198
Homo sapiens	RefSeq	XM_926633.1	ILMN_32441	LOC643272	XM_926633.1	XM_926633.1		643272	88961400	XM_926633.1	LOC643272	XP_931726.1	ILMN_1681260	0004040113	S	61	ATCTCTTGGTGCTATCCCCAAACTGCCACTCTTAATTCCCTCTTAGAGTG	3	+	6419659-6419708		PREDICTED: Homo sapiens hypothetical protein LOC643272 (LOC643272), mRNA.					
Homo sapiens	RefSeq	NM_001039844.2	ILMN_32820	ACBD7	NM_001039844.2	NM_001039844.2		414149	109627666	NM_001039844.2	ACBD7	NP_001034933.1	ILMN_2106002	0001410367	S	2966	ATCTCAGCCTCCAGAGTAGCTGGGACTACAGGTGCGTGCAACCATGCCCA	10	-	15157834-15157883	10p13c	Homo sapiens acyl-Coenzyme A binding domain containing 7 (ACBD7), mRNA.			Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]	bA455B2.2; MGC33893; FLJ38219	bA455B2.2; MGC33893; FLJ38219
Homo sapiens	RefSeq	NR_015421.1	ILMN_370238	LOC154761	NR_015421.1	NR_015421.1		154761	211971086	NR_015421.1	LOC154761		ILMN_3237627	0003180360	S	2099	CCCTAGCTGTGGTAGGAAGTGGCCCTCAGAGTCAAGGAGGCAGGATGAAT	7	-	143509439-143509488		Homo sapiens hypothetical LOC154761 (LOC154761), non-coding RNA.					
Homo sapiens	RefSeq	NM_183008.2	ILMN_10090	UBXN11	NM_183008.2	NM_183008.2		91544	116734678	NM_183008.2	UBXN11	NP_892120.2	ILMN_2276987	0000360528	I	140	AGGTCTCTCAGTTCAGAGCAGAAAGCCGTATACCCAGAGGAGCAGGCAGA	1	-	26629582-26629631	1p36.11b	Homo sapiens UBX domain protein 11 (UBXN11), transcript variant 2, mRNA.				PP2243; SOC; COA-1; DKFZp686F04228	PP2243; DKFZp686F04228; SOC
Homo sapiens	RefSeq	NM_183008.2	ILMN_10090	UBXN11	NM_183008.2	NM_183008.2		91544	116734678	NM_183008.2	UBXN11	NP_892120.2	ILMN_2376416	0006020246	A	1521	TGACAACACCATTGGGGACGTGCGAGCTCTGCTAGCGCAGGCCAGGGTCA	1	-	26609055-26609060:26609140-26609183	1p36.11b	Homo sapiens UBX domain protein 11 (UBXN11), transcript variant 2, mRNA.				PP2243; SOC; COA-1; DKFZp686F04228	PP2243; DKFZp686F04228; SOC
Homo sapiens	RefSeq	NM_183008.1	ILMN_10090	UBXN11	NM_183008.2	NM_183008.2		91544	116734678	NM_183008.2	UBXN11	NP_892120.2	ILMN_1771390	0007610594	I	417	AAAGATCTCAGTCCCTTCCTGCTATGGCGGCATAGGTGCCCCTGTGAGTC	1	-	26627422-26627471	1p36.11b	Homo sapiens UBX domain protein 11 (UBXN11), transcript variant 2, mRNA.				PP2243; SOC; COA-1; DKFZp686F04228	PP2243; DKFZp686F04228; SOC
Homo sapiens	RefSeq	NM_183008.1	ILMN_10090	UBXN11	NM_183008.2	NM_183008.2		91544	116734678	NM_183008.2	UBXN11	NP_892120.2	ILMN_1660043	0003370022	A	1590	GATCTTCAGCACATTCCCGCCCACCCTCTACCAGGACGATACACTCACGC	1	-	26608986-26609035	1p36.11b	Homo sapiens UBX domain protein 11 (UBXN11), transcript variant 2, mRNA.				PP2243; SOC; COA-1; DKFZp686F04228	PP2243; DKFZp686F04228; SOC
Homo sapiens	RefSeq	XM_001716592.1	ILMN_351583	LOC390407	XM_001716592.1	XM_001716592.1		390407	169206511	XM_001716592.1	LOC390407	XP_001716644.1	ILMN_3294919	0007330204	M	151	GAGAAGCCCTCTGTCATCCAGCAGAAGGTGGACTGGCTCACTGCGAAGAT				13q21.2b	PREDICTED: Homo sapiens similar to hCG28210 (LOC390407), mRNA.					
Homo sapiens	RefSeq	XM_927148.1	ILMN_32532	LOC643878	XM_938135.1	XM_938135.1		643878	89036177	XM_938135.1	LOC643878	XP_943228.1	ILMN_1652756	0006400452	S	2	TGACCAGGGTGGCCAAAGTGGACCTGGAGGTGAAAGTGGAGAGCCTGATG				12q13.13d	PREDICTED: Homo sapiens similar to type II keratin Kb4 (LOC643878), mRNA.					
Homo sapiens	RefSeq	XM_001126166.1	ILMN_181847	LOC730517	XM_001126166.1	XM_001126166.1		730517	113423725	XM_001126166.1	LOC730517	XP_001126166.1	ILMN_3224939	0005260066	A	2004	GTCCTGATGGCAGTACAATCCCTTACCAATACAAGCATATCACGACCTGC				12q12c	PREDICTED: Homo sapiens similar to MUC19 (LOC730517), mRNA.					
Homo sapiens	RefSeq	XM_928970.1	ILMN_36799	LOC646008	XM_928970.1	XM_928970.1		646008	89033898	XM_928970.1	LOC646008	XP_934063.1	ILMN_1774479	0007210201	S	61	CTGGAGACAGATGGCAAGGTGCAGAGAGGGCCAGCCCTGGGGCAGCCTCC	11	-	32296383-32296432		PREDICTED: Homo sapiens hypothetical protein LOC646008 (LOC646008), mRNA.					
Homo sapiens	RefSeq	NM_001142308.1	ILMN_369957	LOC100128641	NM_001142308.1	NM_001142308.1		100128641	214831622	NM_001142308.1	LOC100128641	NP_001135780.1	ILMN_3235727	0002850519	S	1497	CAGGAAGCCTGGAGACCCTGTCACATCATCTCAAATAGCAGCATCGAGAC				10p12.33a-p12.32a	Homo sapiens similar to hCG1641533 (LOC100128641), mRNA.					
Homo sapiens	RefSeq	NM_002619.1	ILMN_16715	PF4	NM_002619.1	NM_002619.1		5196	4505732	NM_002619.1	PF4	NP_002610.1	ILMN_1767037	0003610328	S	377	AACTGTGAAAGAAACTTCTGATATTTGTGTTATCCTTATGATTTTAAATA	4	-	75065671-75065720	4q13.3d	Homo sapiens platelet factor 4 (chemokine (C-X-C motif) ligand 4) (PF4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 5789664] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12466273] [evidence IC ]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 5789664] [evidence EXP]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of angiogenesis [goid 16525] [pmid 1688470] [evidence IDA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 12041672] [evidence IDA]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [pmid 11685038] [evidence IDA]; The movement of a leukocyte in response to an external stimulus [goid 30595] [pmid 6945600] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of megakaryocyte differentiation [goid 45653] [pmid 2140694] [evidence IDA]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 12466273] [evidence TAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 9531587] [evidence IDA]	SCYB4; CXCL4; MGC138298	SCYB4; CXCL4; MGC138298
Homo sapiens	RefSeq	NM_005528.1	ILMN_17960	DNAJC4	NM_005528.1	NM_005528.1		3338	5031770	NM_005528.1	DNAJC4	NP_005519.1	ILMN_1687683	0002760458	S	1238	CTCCACAGCACCTCGTGGCCCGTACTCTTGTGTCTCTCAAGCTAAAACTG	11	+	63756987-63757036	11q13.1a	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 4 (DNAJC4), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9473517] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9473517] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9473517] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 9473517] [evidence TAS]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9473517] [evidence NAS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MGC19482; MCG18; DANJC4; MGC71863; HSPF2; MGC57189	MGC19482; MCG18; DANJC4; MGC71863; HSPF2; MGC57189
Homo sapiens	RefSeq	NM_025241.1	ILMN_10771	UBXN6	NM_025241.1	NM_025241.1		80700	13376853	NM_025241.1	UBXN6	NP_079517.1	ILMN_1658624	0002120689	S	1303	TCTGCCCTCCTGACCTTCTCGTGGGACATGGCTGTGCTGGAGGACATCAA	19	-	4445564-4445613	19p13.3d	Homo sapiens UBX domain protein 6 (UBXN6), mRNA.				DKFZp667D109; UBXDC2	DKFZp667D109; UBXDC2
Homo sapiens	RefSeq	XM_001721840.1	ILMN_337359	LOC100128031	XM_001721840.1	XM_001721840.1		100128031	169172345	XM_001721840.1	LOC100128031	XP_001721892.1	ILMN_3255735	0006270431	M	200	AGCTCACTGCAGCCTCAAACTCCTGGGCTCAAGCAATTCGCCTACCTCGA				7q11.23b	PREDICTED: Homo sapiens hypothetical protein LOC100128031 (LOC100128031), mRNA.					
Homo sapiens	RefSeq	NM_016831.1	ILMN_30242	PER3	NM_016831.1	NM_016831.1		8863	8567387	NM_016831.1	PER3	NP_058515.1	ILMN_1660986	0005290538	S	5821	GACCGATGCCCCCCGAGGGGGCTCTCCCCAGCTTAAACTTTGTTGTTTAA	1	+	7827442-7827491	1p36.23b	Homo sapiens period homolog 3 (Drosophila) (PER3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	GIG13	GIG13
Homo sapiens	RefSeq	NM_012212.2	ILMN_8394	PTGR1	NM_012212.2	NM_012212.2		22949	34222094	NM_012212.2	PTGR1	NP_036344.1	ILMN_2225537	0006450440	S	916	CGTCTACCGCTGGCAAGGAGATGCCCGCCAAAAAGCTCTGAAGGACTTGC	9	-	113372208-113372257	9q31.3b	Homo sapiens prostaglandin reductase 1 (PTGR1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [pmid 8576264] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: n-alkanal + NAD(P)+ = alk-2-enal + NAD(P)H + H+ [goid 32440] [evidence IEA]; Catalysis of the reaction: (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprostanoate + NAD(P)+ = (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprosta-13-enoate + NAD(P)H + H+ [goid 47522] [evidence IEA]	MGC34943	MGC34943
Homo sapiens	RefSeq	NM_012212.2	ILMN_8394	PTGR1	NM_012212.2	NM_012212.2		22949	34222094	NM_012212.2	PTGR1	NP_036344.1	ILMN_1704531	0002570332	S	578	GGGCAGATTGCAAAGCTCAAGGGCTGCAAAGTTGTTGGAGCAGTAGGGTC	9	-	113381023-113381052:113385573-113385592	9q31.3b	Homo sapiens prostaglandin reductase 1 (PTGR1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [pmid 8576264] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: n-alkanal + NAD(P)+ = alk-2-enal + NAD(P)H + H+ [goid 32440] [evidence IEA]; Catalysis of the reaction: (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprostanoate + NAD(P)+ = (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprosta-13-enoate + NAD(P)H + H+ [goid 47522] [evidence IEA]	MGC34943	MGC34943
Homo sapiens	RefSeq	NM_001005274.1	ILMN_14057	OR4A16	NM_001005274.1	NM_001005274.1		81327	52627152	NM_001005274.1	OR4A16	NP_001005274.1	ILMN_1808683	0001190315	S	693	GCATAAAGCCCTGCCTACCTGCATCTCCCACATCATTGTGGTTGCCCTCG	11	+	54867945-54867994	11q11b	Homo sapiens olfactory receptor, family 4, subfamily A, member 16 (OR4A16), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	OR11-117; OR4A16Q	OR11-117; OR4A16Q
Homo sapiens	RefSeq	NM_198830.1	ILMN_1374	ACLY	NM_198830.1	NM_198830.1		47	38569422	NM_198830.1	ACLY	NP_942127.1	ILMN_2371379	0004200259	A	4227	CTTTGCATCTGTAATCCACAAAGATTCTGGGCAGCTGCCACCTCAGTCTC	17	-	40023225-40023274	17q21.2b	Homo sapiens ATP citrate lyase (ACLY), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 1371749] [evidence EXP]; Citrate lyase is a multienzyme complex with three constituents: the alpha subunit, citrate-ACP transferase; the beta subunit, citryl-ACP lyase; and the gamma subunit, an acyl-carrier protein which also carries the prosthetic group components. All three subunits are required for citrate lyase enzyme activity [goid 9346] [pmid 1371749] [evidence TAS]	The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle [goid 6101] [pmid 1371749] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 6200] [pmid 1371749] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways involving coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester [goid 15936] [pmid 1371749] [evidence TAS]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ADP + phosphate + acetyl-CoA + oxaloacetate = ATP + citrate + CoA [goid 3878] [pmid 1371749] [evidence TAS]; Catalysis of the reaction: ATP + succinate + CoA = ADP + succinyl-CoA + phosphate [goid 4775] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: citrate = acetate + oxaloacetate [goid 8815] [pmid 1371749] [evidence EXP]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CLATP; ATPCL; ACL	CLATP; ATPCL; ACL
Homo sapiens	RefSeq	XM_001717452.1	ILMN_348986	LOC100131514	XM_001717452.1	XM_001717452.1		100131514	169171849	XM_001717452.1	LOC100131514	XP_001717504.1	ILMN_3215392	0006510730	A	699	TCCTGCCCCGAACACAGAAGTGATCACCAGTCATACCACAACCACCACCC					PREDICTED: Homo sapiens similar to intestinal mucin MUC3B (LOC100131514), mRNA.					
Homo sapiens	RefSeq	NM_001033574.1	ILMN_28731	AMZ2	NM_001033574.1	NM_001033574.1		51321	75812975	NM_001033574.1	AMZ2	NP_001028746.1	ILMN_2309549	0000270739	A	946	CCCTCTCCAAACAAACGCAGCATTTATATACAGTCCATTGGGGACATCCT	17	+	63758167-63758206:63758786-63758795	17q24.2c	Homo sapiens archaelysin family metallopeptidase 2 (AMZ2), transcript variant 6, mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_032921.1	ILMN_28180	AGXT2L2	NM_153373.1	NM_153373.1		85007	24119276	NM_153373.1	AGXT2L2	NP_699204.1	ILMN_1673529	0000870139	A	1578	CCAGCCCTAAGCCAGCCCTGCTCTGCCTAAGTGTACTCCAGAAGAAACTC	5	-	177568514-177568522:177571497-177571527:177571528-177571537	5q35.3b	Homo sapiens alanine-glyoxylate aminotransferase 2-like 2 (AGXT2L2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MGC117348; MGC15875; MGC45484	MGC45484; MGC117348
Homo sapiens	RefSeq	NM_153373.1	ILMN_28180	AGXT2L2	NM_153373.1	NM_153373.1		85007	24119276	NM_153373.1	AGXT2L2	NP_699204.1	ILMN_1686370	0005690082	I	966	TGCAGATGAGATCCAGGTTGGCTTTGGCCGGGTAGGCAAGCACTTCTGGG	5	-	177582108-177582157	5q35.3b	Homo sapiens alanine-glyoxylate aminotransferase 2-like 2 (AGXT2L2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid [goid 8483] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MGC117348; MGC15875; MGC45484	MGC45484; MGC117348; MGC15875
Homo sapiens	RefSeq	NM_019050.1	ILMN_19563	USP53	NM_019050.2	NM_019050.2		54532	148539599	NM_019050.2	USP53	NP_061923.2	ILMN_1795275	0006520619	S	4043	GGCAACACACCAAACTGTCCATCCAGCTCCTCAACTAACGATTTTCAGGC	4	+	120214121-120214170	4q26f	Homo sapiens ubiquitin specific peptidase 53 (USP53), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [pmid 14715245] [evidence IDA]	DKFZp781E1417	DKFZp781E1417
Homo sapiens	RefSeq	NM_016343.3	ILMN_176772	CENPF	NM_016343.3	NM_016343.3		1063	55770833	NM_016343.3	CENPF	NP_057427.3	ILMN_1664516	0004780129	S	10123	CCAGTGAGGGCTGCAGGCTTCCTAGAGGTGTGCTATACCATGCGTCTGTC	1	+	212904364-212904413	1q41a	Homo sapiens centromere protein F, 350/400ka (mitosin) (CENPF), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 9891037] [evidence NAS]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [pmid 7542657] [evidence IDA]; The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions [goid 940] [pmid 12974617] [evidence TAS]; The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions [goid 940] [pmid 7904902] [evidence IDA]; The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions [goid 940] [pmid 7542657] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7642639] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7542657] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 12154071] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12974617] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 7542657] [evidence IDA]	Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [pmid 12154071] [evidence IMP]; Progression through G2 phase, one of two 'gap' phases in the mitotic cell cycle; G2 is the interval between the completion of DNA synthesis and the beginning of mitosis [goid 85] [pmid 7651420] [evidence IMP]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; A signal transduction based surveillance mechanism that ensures the fidelity of cell division by preventing the premature advance of cells from metaphase to anaphase prior to the successful attachment of kinetochores to spindle microtubules (spindle assembly) [goid 7094] [pmid 12974617] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 15927522] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 12507285] [evidence NAS]; Any process that modulates the frequency, rate or extent of striated muscle development [goid 16202] [pmid 10373470] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15677469] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 12467231] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle [goid 51310] [pmid 15870278] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form the kinetochore, a multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 51382] [pmid 16252009] [evidence NAS]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 9891037] [evidence NAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 7642639] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15677469] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 7642639] [evidence IPI]; Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [pmid 12974617] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 7642639] [evidence IDA]	PRO1779; hcp-1; CENF	PRO1779; hcp-1; CENF
Homo sapiens	RefSeq	XM_930406.1	ILMN_173650	LOC400578	XR_017543.1	XR_017543.1		400578	113426662	XR_017543.1	LOC400578		ILMN_1738546	0002970152	S	878	GAGGAGATGCTTGCTCTGCGAGGTCAGACCGGTGGAGAAGTGAACGTGGA	17	-	16675285-16675332:16675447-16675448	17p11.2h	PREDICTED: Homo sapiens similar to Keratin, type I cytoskeletal 14 (Cytokeratin-14) (CK-14) (Keratin-14) (K14) (LOC400578), mRNA.					
Homo sapiens	RefSeq	XM_940706.1	ILMN_173650	LOC400578	XR_017543.1	XR_017543.1		400578	113426662	XR_017543.1	LOC400578		ILMN_1713813	0000610025	A	1611	CAGCGCAGTTCCCAGCTGTCTCCCTGCTCCTCTACTGGTGATGGGCTAAT	17	-	16673907-16673956	17p11.2h	PREDICTED: Homo sapiens similar to Keratin, type I cytoskeletal 14 (Cytokeratin-14) (CK-14) (Keratin-14) (K14) (LOC400578), mRNA.					
Homo sapiens	RefSeq	NM_005073.1	ILMN_165833	SLC15A1	NM_005073.2	NM_005073.2		6564	141802677	NM_005073.2	SLC15A1	NP_005064.1	ILMN_1652857	0005860491	S	2881	AGGAGGCAGGAGCCAAGGCCAAAAGTGAACGTACAGGTTTAAAATGGCTG	13	-	98134231-98134280	13q32.3a	Homo sapiens solute carrier family 15 (oligopeptide transporter), member 1 (SLC15A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7896779] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7896779] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 6857] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 7896779] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a oligopeptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement [goid 5427] [evidence IEA]; Enables the directed movement of oligopeptides into, out of, within or between cells. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages [goid 15198] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: peptide(out) + H+(out) = peptide(in) + H+(in). Catalysis of the transfer of a peptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by hydrogen ion movement [goid 15333] [pmid 7896779] [evidence TAS]	PEPT1; HPECT1; HPEPT1	PEPT1; HPECT1; HPEPT1
Homo sapiens	RefSeq	NM_015086.1	ILMN_1972	DDN	NM_015086.1	NM_015086.1		23109	62079298	NM_015086.1	DDN	NP_055901.2	ILMN_1673450	0001230129	S	3520	TCTCTCCGATCCTTGGACACCTCCTCTGTCTGCCATTTATTAGCCATGTG	12	-	49389107-49389156	12q13.12a	Homo sapiens dendrin (DDN), mRNA.				KIAA0749	KIAA0749
Homo sapiens	RefSeq	NM_004828.2	ILMN_7140	NCR2	NM_004828.3	NM_004828.3		9436	153945781	NM_004828.3	NCR2	NP_004819.2	ILMN_1761364	0002140411	S	581	CCCCTGAGTCTCCATCTACCATCCCTGTCCCTTCACAGCCACAGAACTCC	6	+	41309631-41309667:41309774-41309786	6p21.1g	Homo sapiens natural cytotoxicity triggering receptor 2 (NCR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10049942] [evidence TAS]	A defense response that is mediated by cells [goid 6968] [pmid 10049942] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10049942] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 10049942] [evidence TAS]	LY95; CD336; dJ149M18.1; NKP44; NK-p44	LY95; CD336; dJ149M18.1; NKP44; NK-p44
Homo sapiens	RefSeq	XM_941921.1	ILMN_34210	LOC652469	XM_941921.1	XM_941921.1		652469	89062839	XM_941921.1	LOC652469	XP_947014.1	ILMN_2163492	0002450360	S	12	GGATTTTCCTGCCCATGATGATTCACATAATAAACACAATGAACTGACAG					PREDICTED: Homo sapiens hypothetical LOC652469 (LOC652469), mRNA.					
Homo sapiens	RefSeq	XR_039403.1	ILMN_339716	LOC644101	XR_039403.1	XR_039403.1		644101	169169808	XR_039403.1	LOC644101		ILMN_3204898	0005090524	A	772	AAGTAGCGTTGGAAGAGTTGCTGGGGGGTTTTTTGAATCCATAGCACTGG				6q22.1d	PREDICTED: Homo sapiens misc_RNA (LOC644101), miscRNA.					
Homo sapiens	RefSeq	NM_138350.2	ILMN_21229	THAP3	NM_138350.2	NM_138350.2		90326	42734378	NM_138350.2	THAP3	NP_612359.2	ILMN_1766128	0005390112	S	446	AGCTTCAGTTGCCCCCAAATGCCGAAGGCCACGTAAAACAGGCAATGTTG	1	+	6615102-6615142:6616667-6616675	1p36.31a	Homo sapiens THAP domain containing, apoptosis associated protein 3 (THAP3), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC33488	MGC33488
Homo sapiens	RefSeq	XM_001127873.2	ILMN_180519	LOC728100	XM_001127873.2	XM_001127873.2		728100	169165119	XM_001127873.2	LOC728100	XP_001127873.1	ILMN_3274443	0004260577	M	693	AGCTGGAGCTGGATCTACCATGAAAGACTTGTGAATCCAGGAAGAGAGAC	3	+	199422162-199422169:199423014-199423055	3q29i	PREDICTED: Homo sapiens hypothetical LOC728100, transcript variant 1 (LOC728100), mRNA.					
Homo sapiens	RefSeq	NM_017749.2	ILMN_523	AMBRA1	NM_017749.2	NM_017749.2		55626	50843826	NM_017749.2	AMBRA1	NP_060219.2	ILMN_1662681	0001110129	S	4747	CAAAGCTAGCCCAAGGCTGGGGAAGGGGAGGAGACTCCAGGTCAGAATGT	11	-	46490916-46490939:46515158-46515183	11p11.2c	Homo sapiens autophagy/beclin-1 regulator 1 (AMBRA1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17589504] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		WDR94; FLJ20294; AMBRA1; MGC33725; KIAA1736	WDR94; FLJ20294; AMBRA1; MGC33725; KIAA1736
Homo sapiens	RefSeq	NM_001173.2	ILMN_4862	ARHGAP5	NM_001173.2	NM_001173.2		394	71834860	NM_001173.2	ARHGAP5	NP_001164.2	ILMN_2322747	0002570605	A	8849	CCTCCACTATATGAGTTTTCTTTGTCAGGGGGAGAGGAGTGGGAAGAGTC	14	+	31697933-31697982	14q12e	Homo sapiens Rho GTPase activating protein 5 (ARHGAP5), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8537347] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8537347] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [pmid 8537347] [evidence TAS]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8537347] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [pmid 8537347] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 1689011] [evidence IPI]	RhoGAP5; p190-B; GFI2	RhoGAP5; p190-B; GFI2
Homo sapiens	RefSeq	NM_002669.2	ILMN_22972	PLRG1	NM_002669.2	NM_002669.2		5356	77404429	NM_002669.2	PLRG1	NP_002660.1	ILMN_1749634	0001470082	S	1349	CTGGAGCTGACAATGGCACCATGCATCTTTGGGACTGGAGAACTGGCTAC	4	-	155678037-155678081:155678571-155678575	4q32.1a	Homo sapiens pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) (PLRG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9765207] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9765207] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9765207] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	MGC110980; PRL1	MGC110980; PRL1
Homo sapiens	RefSeq	XM_001723512.1	ILMN_345030	LOC100128060	XM_001723512.1	XM_001723512.1		100128060	169206391	XM_001723512.1	LOC100128060	XP_001723564.1	ILMN_3264543	0002710377	M	1	CACGAGGTTGGGGCCAGGCAAGTTCTCCCAGGAGAAGGCCATGTTCAGTT				13q12.11c	PREDICTED: Homo sapiens similar to mCG19129, transcript variant 2 (LOC100128060), mRNA.					
Homo sapiens	RefSeq	XM_001723512.1	ILMN_345030	LOC100128060	XM_001723512.1	XM_001723512.1		100128060	169206391	XM_001723512.1	LOC100128060	XP_001723564.1	ILMN_3188076	0001050678	A	58	CAAGATCGTGAAGCCCAATGATGAGAAGCCGGACGAGTTCGAGTCCGGCA				13q12.11c	PREDICTED: Homo sapiens similar to mCG19129, transcript variant 2 (LOC100128060), mRNA.					
Homo sapiens	RefSeq	NM_001975.2	ILMN_15419	ENO2	NM_001975.2	NM_001975.2		2026	16507966	NM_001975.2	ENO2	NP_001966.1	ILMN_1765796	0000050402	S	2235	TGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCTATA	12	+	6902932-6902981	12p13.31d	Homo sapiens enolase 2 (gamma, neuronal) (ENO2), mRNA.	A multimeric enzyme complex, usually a dimer or an octamer, that catalyzes the conversion of 2-phospho-D-glycerate to phosphoenolpyruvate and water [goid 15] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 2-phospho-D-glycerate = phosphoenolpyruvate + H2O [goid 4634] [pmid 2045099] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	NSE	NSE
Homo sapiens	RefSeq	XM_935437.1	ILMN_136997	KIF21B	XM_935437.1	XM_935437.1		23046	88943611	XM_935437.1	KIF21B	XP_940530.1	ILMN_1800670	0003180487	I	3062	GAAGTGAAAGATTAAAATCGCCTCTCCCTGAACCCTCCACCCCAAGCCCT	1	-	199237640-199237689	1q32.1b	PREDICTED: Homo sapiens kinesin family member 21B, transcript variant 3 (KIF21B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	XM_935437.1	ILMN_136997	KIF21B	XM_935437.1	XM_935437.1		23046	88943611	XM_935437.1	KIF21B	XP_940530.1	ILMN_1692060	0000160356	A	2781	TCAACAACCGCGTCACCCAGCTCATGAGCCAGGAGGCCAACCTGCTGCTA	1	-	199237921-199237970	1q32.1b	PREDICTED: Homo sapiens kinesin family member 21B, transcript variant 3 (KIF21B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_178507.2	ILMN_12751	OAF	NM_178507.2	NM_178507.2		220323	31341888	NM_178507.2	OAF	NP_848602.1	ILMN_1668345	0004200025	S	1659	ATCACAGACCACGAGTGCCTTTCCCGGACCTGGACGTTGCCTCCAGAGCA	11	+	119605657-119605706	11q23.3g	Homo sapiens OAF homolog (Drosophila) (OAF), mRNA.				NS5ATP13TP2; MGC52117	NS5ATP13TP2; MGC52117
Homo sapiens	RefSeq	NM_000491.2	ILMN_36274	C1QB	NM_000491.3	NM_000491.3		713	87298827	NM_000491.3	C1QB	NP_000482.3	ILMN_1796409	0005910019	S	805	CAGGCCACCGACAAGAACTCACTACTGGGCATGGAGGGTGCCAACAGCAT	1	+	22860377-22860426	1p36.12a	Homo sapiens complement component 1, q subcomponent, B chain (C1QB), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1249422] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 814163] [evidence EXP]; A protein complex composed of six subunits of C1q, each formed of the three homologous polypeptide chains C1QA, C1QB, and C1QB, and tetramer of two C1QR and two C1QS polypeptide chains [goid 5602] [pmid 1706597] [evidence TAS]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]			
Homo sapiens	RefSeq	XM_001725141.1	ILMN_351116	LOC283116	XM_001725141.1	XM_001725141.1		283116	169203361	XM_001725141.1	LOC283116	XP_001725193.1	ILMN_3251161	0004180746	M	1449	GAGGATGGACTCTTTCTTCTTGGGTGTGTTAAGAATGACATTCAACGCAG				11p11.12d	PREDICTED: Homo sapiens similar to ring finger protein 18 (LOC283116), mRNA.					
Homo sapiens	RefSeq	NM_018367.5	ILMN_356839	ACER3	NM_018367.5	NM_018367.5		55331	170932466	NM_018367.5	ACER3	NP_060837.3	ILMN_3237774	0002360228	S	4229	CCACCTGTGTGGCTGTTTGCAGACCTACCTCTGTCTTCCATTTTGCATCC	11	+	76734692-76734741	11q13.5c	Homo sapiens alkaline ceramidase 3 (ACER3), mRNA.					
Homo sapiens	RefSeq	NR_029863.1	ILMN_388178	MIR370	NR_029863.1	NR_029863.1		442915	262206207	NR_029863.1	MIR370		ILMN_3308713	0004590368	S	2	ACAGAGAAGCCAGGTCACGTCTCTGCAGTTACACAGCTCACGAGTGCCTG				14q32.31a	Homo sapiens microRNA 370 (MIR370), microRNA.					
Homo sapiens	RefSeq	NM_014618.1	ILMN_16678	DBC1	NM_014618.2	NM_014618.2		1620	148528999	NM_014618.2	DBC1	NP_055433.2	ILMN_1741603	0004850450	S	2959	AGAAGGGTCTCAGCCTTTTGTGGAGCATTGAGGGAGTTGCTTCTTAGGCC	9	-	121929095-121929144	9q33.1d	Homo sapiens deleted in bladder cancer 1 (DBC1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11420708] [evidence IDA]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 14712213] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 11420708] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12442002] [evidence IPI]	FAM5A; DBCCR1	FAM5A; DBCCR1
Homo sapiens	RefSeq	NM_004957.4	ILMN_23306	FPGS	NM_004957.4	NM_004957.4		2356	66932983	NM_004957.4	FPGS	NP_004948.4	ILMN_1659576	0006650066	I	49	CTATGTCGCGGGCGCGGAGCCACCTGCGCGCCGCTCTATTCCTGGCAGCG	9	+	129605023-129605024:129605025-129605072	9q34.11a	Homo sapiens folylpolyglutamate synthase (FPGS), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1409616] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7721888] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7721888] [evidence TAS]	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [pmid 10964921] [evidence ISS]; The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [pmid 10964921] [evidence ISS]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [pmid 7721888] [evidence TAS]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The chemical reactions and pathways resulting in the formation of folic acid and its derivatives [goid 9396] [evidence IEA]	Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [pmid 10964921] [evidence ISS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + tetrahydrofolyl-(Glu)(n) + L-glutamate = ADP + phosphate + tetrahydrofolyl-(Glu)(n+1) [goid 4326] [pmid 7721888] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]		
Homo sapiens	RefSeq	XR_000623.1	ILMN_164152	NOBOX	XM_001134424.1	XM_001134424.1		135935	113419858	XM_001134424.1	NOBOX	XP_001134424.1	ILMN_1748607	0001070441	A	1230	TACCTTTCCAGAGCCCCCCATGCTGCTGACTTCTGACCAGACTTTGGCCC				7q35a	PREDICTED: Homo sapiens NOBOX oogenesis homeobox (NOBOX), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	XM_001723868.1	ILMN_339917	LOC100130859	XM_001723868.1	XM_001723868.1		100130859	169164925	XM_001723868.1	LOC100130859	XP_001723920.1	ILMN_3258781	0000540026	M	323	AACTCACCAAAGGCTCAGAAATAAGAGTGAGAACCATTCAGTGTGGCCAA				2q37.1e	PREDICTED: Homo sapiens hypothetical LOC100130859 (LOC100130859), mRNA.					
Homo sapiens	RefSeq	NM_015332.2	ILMN_26863	NUDCD3	NM_015332.3	NM_015332.3		23386	122939164	NM_015332.3	NUDCD3	NP_056147.2	ILMN_1796900	0004290273	S	3415	CCTTGCTCCCGTTGAGCCACGCTGTCTGGTGGGTGATTCTCTGCCCTGAG	7	-	44424245-44424294	7p13d	Homo sapiens NudC domain containing 3 (NUDCD3), mRNA.				KIAA1068; NudCL	KIAA1068
Homo sapiens	RefSeq	NM_003276.1	ILMN_12700	TMPO	NM_003276.1	NM_003276.1		7112	4507554	NM_003276.1	TMPO	NP_003267.1	ILMN_1768816	0003400630	I	2129	CCATGGGAAATGCCACTGTAGGTCGTCGATACCTCTGGCTGAAGGATTGC	12	+	97452091-97452140	12q23.1c	Homo sapiens thymopoietin (TMPO), transcript variant 1, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 17284516] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17284516] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 8530026] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8530026] [evidence TAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [pmid 8530026] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [pmid 8530026] [evidence TAS]	MGC61508; PRO0868; CMD1T; TP; LAP2	MGC61508; PRO0868; CMD1T; TP; LAP2
Homo sapiens	RefSeq	NM_003276.1	ILMN_12700	TMPO	NM_003276.1	NM_003276.1		7112	4507554	NM_003276.1	TMPO	NP_003267.1	ILMN_1677747	0001990204	A	571	CAGCTTGTGAAATACGGAGTGAATCCTGGTCCTATTGTGGGAACAACCAG	12	+	97445882-97445921:97449589-97449598	12q23.1c	Homo sapiens thymopoietin (TMPO), transcript variant 1, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 17284516] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17284516] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 8530026] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8530026] [evidence TAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [pmid 8530026] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope [goid 5521] [pmid 8530026] [evidence TAS]	MGC61508; PRO0868; CMD1T; TP; LAP2	MGC61508; PRO0868; CMD1T; TP; LAP2
Homo sapiens	RefSeq	XR_038502.1	ILMN_334809	LOC100127918	XR_038502.1	XR_038502.1		100127918	169166737	XR_038502.1	LOC100127918		ILMN_3252941	0004610754	M	92	GAAGGTGGCGGGGCAGGATAGTTCTGTGGTGCAGTTTGATTAAAAGAGGC				4q21.1b	PREDICTED: Homo sapiens misc_RNA (LOC100127918), miscRNA.					
Homo sapiens	RefSeq	NM_001007253.1	ILMN_16354	ERV3	NM_001007253.1	NM_001007253.1		2086	55925625	NM_001007253.1	ERV3	NP_001007254.1	ILMN_2118663	0005720288	S	1532	GACTGGCCTTAGACTACCTCCTAGCCCAGGAAGAGGGAGTATGCGGAAAG	7	-	64089138-64089187	7q11.21c	Homo sapiens endogenous retroviral sequence 3 (includes zinc finger protein H-plk/HPF9) (ERV3), mRNA.	The complete fully infectious extracellular virus particle [goid 19012] [evidence IEA]; The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]; The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites [goid 32196] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	H-PLK; HERV-R	H-PLK; HERV-R
Homo sapiens	RefSeq	NM_002227.1	ILMN_554	JAK1	NM_002227.2	NM_002227.2		3716	102469033	NM_002227.2	JAK1	NP_002218.2	ILMN_1793384	0001740543	S	3427	ATTGCCTCTGACGTCTGGTCTTTTGGAGTCACTCTGCATGAGCTGCTGAC	1	-	65301811-65301860	1p31.3b	Homo sapiens Janus kinase 1 (JAK1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell, where the receptor possesses catalytic activity or is closely associated with an enzyme such as a protein kinase [goid 7167] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence IEA]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [evidence IEA]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA];  [goid 4718] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	JAK1B; JAK1A; JTK3	JAK1B; JAK1A
Homo sapiens	RefSeq	NM_133180.1	ILMN_15325	EPS8L1	NM_133180.1	NM_133180.1		54869	21264607	NM_133180.1	EPS8L1	NP_573441.1	ILMN_1671600	0002030091	A	2229	CTTCGCAAAGAGTGACGAGGCCCCGTGGGAGAACGGACTCCTCAGACTCT	19	+	60290808-60290857	19q13.42b	Homo sapiens EPS8-like 1 (EPS8L1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DRC3; MGC23164; PP10566; MGC4642; EPS8R1; FLJ20258	DRC3; PP10566; EPS8R1; FLJ20258; MGC23164; MGC4642
Homo sapiens	Unigene	Hs.542544	ILMN_106357	HS.542544	Hs.542544		Hs.542544		6438359	AW172411			ILMN_1835730	0003140754	S	24	AGCTACACTCCACAGTGATCTGGACGTCGGCAGGGCTGAGGACATGAGAC	21	-	42318772-42318821		xj38e12.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2659534 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022173.1	ILMN_29910	TIA1	NM_022173.1	NM_022173.1		7072	11863162	NM_022173.1	TIA1	NP_071505.1	ILMN_1778691	0003120075	A	2261	GCACAGTTAGCAAACTTTGTATGTCATTTCCTTCAAGGCATCATGCAGAG	2	-	70292390-70292439	2p14a	Homo sapiens TIA1 cytotoxic granule-associated RNA binding protein (TIA1), transcript variant 2, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 1934064] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [pmid 1934064] [evidence TAS]		
Homo sapiens	RefSeq	NM_022173.1	ILMN_29910	TIA1	NM_022173.1	NM_022173.1		7072	11863162	NM_022173.1	TIA1	NP_071505.1	ILMN_2388466	0005310358	A	1822	GGCATTGTTTGAGCTGTCCCATCTCCACTGTTATCCCTTTGGGTTTTTTA	2	-	70292829-70292878	2p14a	Homo sapiens TIA1 cytotoxic granule-associated RNA binding protein (TIA1), transcript variant 2, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 1934064] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA [goid 8143] [pmid 1934064] [evidence TAS]		
Homo sapiens	RefSeq	NM_001039.2	ILMN_23990	SCNN1G	NM_001039.2	NM_001039.2		6340	42476332	NM_001039.2	SCNN1G	NP_001030.2	ILMN_2153837	0006270735	S	3160	AAGCACCTAGATAGGTTAGCATAGGGGACTGCAAATGGTGTTCCGCAAAG	16	+	23135362-23135411	16p12.1c	Homo sapiens sodium channel, nonvoltage-gated 1, gamma (SCNN1G), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8640238] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 8521520] [evidence TAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 8640238] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11244092] [evidence IPI];  [goid 15280] [pmid 8640238] [evidence TAS]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ENaCg; ENaCgamma; PHA1; SCNEG	ENaCg; ENaCgamma; PHA1; SCNEG
Homo sapiens	RefSeq	XM_211908.5	ILMN_37971	LOC285479	XM_211908.5	XM_211908.5		285479	88973359	XM_211908.5	LOC285479	XP_211908.4	ILMN_1738847	0004180037	S	72	GGGAGTAAGAGCCAGCCCCTCATACCCCCCGCCGGCTCTTAGGACCCACA	4	+	9101858-9101907		PREDICTED: Homo sapiens similar to unc-93 homolog B1 (LOC285479), mRNA.					
Homo sapiens	RefSeq	NM_144571.1	ILMN_18210	CNOT6L	NM_144571.1	NM_144571.1		246175	21687267	NM_144571.1	CNOT6L	NP_653172.1	ILMN_1802450	0000010338	S	1410	CACCAATTACACCTTTGATTTCAAAGTGAGTGGCAGCCTTTGGGCAGGTG	4	-	78866319-78866368	4q21.1c	Homo sapiens CCR4-NOT transcription complex, subunit 6-like (CNOT6L), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_001004457.1	ILMN_20770	OR1N2	NM_001004457.1	NM_001004457.1		138882	52317165	NM_001004457.1	OR1N2	NP_001004457.1	ILMN_1797797	0004250431	S	420	TGTGGCCATCTGCCAACCACTCCATTACAGCACATCTATGAGTCCCCAGC	9	+	124355689-124355738	9q33.2b	Homo sapiens olfactory receptor, family 1, subfamily N, member 2 (OR1N2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR9-23	OR9-23
Homo sapiens	RefSeq	NM_080873.1	ILMN_24884	ASB11	NM_080873.1	NM_080873.1		140456	18254473	NM_080873.1	ASB11	NP_543149.1	ILMN_2272251	0006510369	I	126	AGGAAATAGAAAAGAAGCGGCTAGGATAGCAGAAGAGATCTATGGTGGAA	X	-	15333552-15333601	Xp22.2	Homo sapiens ankyrin repeat and SOCS box-containing 11 (ASB11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]		MGC119169; DKFZp779E2460; MGC119168	MGC119169; DKFZp779E2460; MGC119168
Homo sapiens	RefSeq	NM_001080472.1	ILMN_162856	FITM2	NM_001080472.1	NM_001080472.1		128486	122937336	NM_001080472.1	FITM2	NP_001073941.1	ILMN_2338593	0007400195	A	608	GATGTCTGTGCTGCATGAGGTGAAGACGGACCGAAGCCACTGCCTCCACA	20	-	42935497-42935546	20q13.12a	Homo sapiens fat storage-inducing transmembrane protein 2 (FITM2), mRNA.				dJ881L22.2; MGC30135; Fit2	dJ881L22.2; MGC30135; Fit2
Homo sapiens	RefSeq	XM_001714694.1	ILMN_352730	LOC100130426	XM_001714694.1	XM_001714694.1		100130426	169178991	XM_001714694.1	LOC100130426	XP_001714746.1	ILMN_3273499	0003850037	M	164	AGGTGGCTGCACCCGGCGAGCAAGGTGCTCGAAGCCCCGAGAACGCAGGA				9q21.13c	PREDICTED: Homo sapiens hypothetical protein LOC100130426 (LOC100130426), mRNA.					
Homo sapiens	RefSeq	NM_003895.2	ILMN_20478	SYNJ1	NM_003895.2	NM_003895.2		8867	44921605	NM_003895.2	SYNJ1	NP_003886.2	ILMN_2393968	0002760364	A	4682	CCGCCCGGCACCAGCCCTCCAGTAGATCCTTTCACGACCTTGGCCTCTAA	21	-	32925209-32925258	21q22.11b	Homo sapiens synaptojanin 1 (SYNJ1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 9428629] [evidence TAS]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; Invagination of the axonal plasma membrane creating a membrane-bounded vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release [goid 48488] [pmid 9428629] [evidence TAS]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of substances in synaptic membrane-bounded vesicles within the neuron along the cytoskeleton either toward or away from the neuronal cell body [goid 48489] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IEA]; Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [pmid 9428629] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the conversion of phosphatidylinositol-3-phosphate, phosphatidylinositol-4-phosphate, and phosphatidylinositol-3,5-bisphosphate, but not PI-4,5-bisphosphate, to phosphatidylinositol; PPIPase activity is a key regulator of membrane trafficking and actin cytoskeleton organization [goid 17120] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the conversion of phosphatidylinositol-3-phosphate, phosphatidylinositol-4-phosphate, and phosphatidylinositol-3,5-bisphosphate, but not PI-4,5-bisphosphate, to phosphatidylinositol; PPIPase activity is a key regulator of membrane trafficking and actin cytoskeleton organization [goid 17120] [evidence IEA]	INPP5G	INPP5G
Homo sapiens	RefSeq	NM_002739.3	ILMN_175834	PRKCG	NM_002739.3	NM_002739.3		5582	47132626	NM_002739.3	PRKCG	NP_002730.1	ILMN_1739812	0006650484	S	2846	CCCTCCTCCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATA	19	+	54410619-54410668	19q13.41b-q13.42a	Homo sapiens protein kinase C, gamma (PRKCG), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 3755548] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Behavior that is dependent upon the sensation of chemicals [goid 7635] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31397] [pmid 15808853] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of mismatch repair [goid 32425] [pmid 15808853] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 42177] [pmid 15808853] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein, with a requirement for diacylglycerol [goid 4697] [pmid 3755548] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]	SCA14; PKC-gamma; PKCG; PKCC; MGC57564	SCA14; PKC-gamma; PKCG; PKCC; MGC57564
Homo sapiens	RefSeq	NM_018191.3	ILMN_12797	RCBTB1	NM_018191.3	NM_018191.3		55213	57242758	NM_018191.3	RCBTB1	NP_060661.3	ILMN_1695317	0006760195	S	3358	GATACAAGCCTAGGAGCCCCAGCCCCCTTTTCTTGACCATATCACAAGTG	13	-	50106707-50106756	13q14.3a	Homo sapiens regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 (RCBTB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP11-185C18.1; CLLD7; GLP; CLLL7; MGC33184	CLLD7; RP11-185C18.1; GLP; CLLL7; MGC33184
Homo sapiens	RefSeq	NM_138437.3	ILMN_8440	GPRASP2	NM_001004051.1	NM_001004051.1		114928	51702247	NM_001004051.1	GPRASP2	NP_001004051.1	ILMN_1754727	0003130128	A	3234	ACCACCTGCCGCTGATCAGCCTTATGTTCCCAAAGAGCCCTGAGTAGTGC	X	+	101858979-101859028	Xq22.1e	Homo sapiens G protein-coupled receptor associated sorting protein 2 (GPRASP2), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15383276] [evidence IPI]	GASP2; FLJ37327; FLJ35662	GASP2; FLJ37327; FLJ35662
Homo sapiens	RefSeq	NM_021083.2	ILMN_7624	XK	NM_021083.2	NM_021083.2		7504	18860914	NM_021083.2	XK	NP_066569.1	ILMN_1759117	0006620630	S	4591	GAGTTCCTGAGTGGATATGCGAATCTTTGGTCTTCTCGACAGGTGCCCTT	X	+	37475828-37475877	Xp21.1a	Homo sapiens X-linked Kx blood group (McLeod syndrome) (XK), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9647734] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8004674] [evidence TAS]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8004674] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7737196] [evidence IPI]	XKR1; KX; X1k	XKR1; KX; X1k
Homo sapiens	RefSeq	NM_002856.1	ILMN_3298	PVRL2	NM_002856.2	NM_002856.2		5819	112789534	NM_002856.2	PVRL2	NP_002847.1	ILMN_1718303	0004890707	S	1789	CTGGACGGCTCCCTCATCTCACGGCGGGCAGTTTATGTGTGACCTGGACA	19	+	45381836-45381877:45381878-45381885	19q13.32a	Homo sapiens poliovirus receptor-related 2 (herpesvirus entry mediator B) (PVRL2), transcript variant alpha, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9657005] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 9657005] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]	PVRR2; HVEB; PRR2; CD112	PVRR2; HVEB; PRR2; CD112
Homo sapiens	RefSeq	NM_032265.1	ILMN_27083	ZMYND15	NM_032265.1	NM_032265.1		84225	14149998	NM_032265.1	ZMYND15	NP_115641.1	ILMN_1778136	0006580717	S	2139	CCGGCGGAAATGAATGCTGATACCCTAGTAGTCCCCAGCTCCCAAACACT	17	+	4596022-4596034:4596035-4596071	17p13.2c	Homo sapiens zinc finger, MYND-type containing 15 (ZMYND15), transcript variant 2, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434N127	DKFZp434N127
Homo sapiens	RefSeq	NM_080805.2	ILMN_507	COL13A1	NM_080805.2	NM_080805.2		1305	22027588	NM_080805.2	COL13A1	NP_542995.2	ILMN_2370624	0003870228	A	2876	AAATTATTGTGTCCTGGTGCCAAAGGGGGCCAGCCAGAACTGAGGTGCTG	10	+	71388736-71388785	10q21.3e-q22.1a	Homo sapiens collagen, type XIII, alpha 1 (COL13A1), transcript variant 9, mRNA.	A collagen homotrimer of alpha1(XIII) chains; type X collagen triple helices span lipid bilayer membranes [goid 5600] [pmid 2459707] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9624150] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process by which the anatomical structures of branches are generated and organized. Morphogenesis pertains to the creation of form. A branch is a division or offshoot from a main stem. Examples in animals would include blood vessels, nerves, lymphatics and other endothelial or epithelial tubes [goid 1763] [evidence ISS]; The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence ISS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 11956183] [evidence IPI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 10865988] [evidence IEP]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11956183] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 11956183] [evidence IDA]	FLJ42485	FLJ42485
Homo sapiens	RefSeq	XM_001128324.2	ILMN_169250	LOC728046	XM_001128324.2	XM_001128324.2		728046	169204336	XM_001128324.2	LOC728046	XP_001128324.1	ILMN_3243809	0001780725	S	2042	CGAGCTCACCTCCCAGACCCTAAGAATTACCCATGGAGGGGAACGGCAGT	12	-	122414522-122414571	12q24.31d	PREDICTED: Homo sapiens hypothetical LOC728046 (LOC728046), mRNA.					
Homo sapiens	RefSeq	NM_003952.2	ILMN_25041	RPS6KB2	NM_003952.2	NM_003952.2		6199	55953116	NM_003952.2	RPS6KB2	NP_003943.2	ILMN_1761175	0004150136	A	1202	ACAGCCCTCAGCGAGAGTGCCAACCAGGCCTTCCTGGGCTTCACATACGT	11	+	66958496-66958531:66958629-66958642	11q13.1f	Homo sapiens ribosomal protein S6 kinase, 70kDa, polypeptide 2 (RPS6KB2), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10490848] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 9804755] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9804755] [evidence TAS]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9878560] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p70S6Kb; P70-beta-2; S6K-beta2; p70(S6K)-beta; P70-beta-1; KLS; S6K2; SRK; STK14B; P70-beta	p70S6Kb; P70-beta-2; S6K-beta2; p70(S6K)-beta; P70-beta-1; KLS; S6K2; SRK; STK14B; P70-beta
Homo sapiens	RefSeq	NM_003952.2	ILMN_25041	RPS6KB2	NM_003952.2	NM_003952.2		6199	55953116	NM_003952.2	RPS6KB2	NP_003943.2	ILMN_2364357	0002350538	A	1713	CCACGCCCCGCGCTCAACTGCTCCCGTGGAAGATTAAAGGGCTGAATCAT	11	+	66959398-66959447	11q13.1f	Homo sapiens ribosomal protein S6 kinase, 70kDa, polypeptide 2 (RPS6KB2), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10490848] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 9804755] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9804755] [evidence TAS]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9878560] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p70S6Kb; P70-beta-2; S6K-beta2; p70(S6K)-beta; P70-beta-1; KLS; S6K2; SRK; STK14B; P70-beta	p70S6Kb; P70-beta-2; S6K-beta2; p70(S6K)-beta; P70-beta-1; KLS; S6K2; SRK; STK14B; P70-beta
Homo sapiens	RefSeq	NM_001521.1	ILMN_23500	GTF3C2	NM_001521.2	NM_001521.2		2976	78482615	NM_001521.2	GTF3C2	NP_001512.1	ILMN_1746457	0002140064	S	3638	CCACAGACACCCTACCGATAGAACAGTGGCTCAGATCTTACTTGCTCCTG	2	-	27548953-27549002	2p23.3a	Homo sapiens general transcription factor IIIC, polypeptide 2, beta 110kDa (GTF3C2), transcript variant 1, mRNA.	A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIC contains three conserved subunits that associate with the proximal Pol III promoter element, and additional subunits that associate with sequence elements downstream of the promoter and are more diverged among species [goid 127] [pmid 17409385] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of RNA on a template of DNA [goid 6351] [pmid 17409385] [evidence IDA]; The synthesis of 5S ribosomal RNA (rRNA), or an equivalent rRNA, from a DNA template [goid 42791] [pmid 17409385] [evidence IC ]; The synthesis of transfer RNA (tRNA) from a DNA template by RNA Polymerase III (Pol III), originating at a Pol III promoter [goid 42797] [pmid 17409385] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 17409385] [evidence IDA]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 17409385] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7729686] [evidence TAS]	KIAA0011; TFIIIC-BETA; TFIIIC110	KIAA0011; TFIIIC-BETA; TFIIIC110
Homo sapiens	RefSeq	NM_205856.2	ILMN_23271	SPACA5	NM_205856.2	NM_205856.2		389852	118498372	NM_205856.2	SPACA5	NP_995328.2	ILMN_3251668	0004760025	S	19	GGTGTAAAATAACGGGAAGGCGGGATGCGTGGCTAAATTGCTCTGCGTGC	X	+	47748696-47748745	Xp11.23e	Homo sapiens sperm acrosome associated 5 (SPACA5), mRNA.				dJ54B20.3; UNQ6288; SLLP2; LYC5; LYZL5	dJ54B20.3; UNQ6288
Homo sapiens	RefSeq	NM_205856.2	ILMN_23271	SPACA5	NM_205856.2	NM_205856.2		389852	118498372	NM_205856.2	SPACA5	NP_995328.2	ILMN_2128697	0005900520	S	82	GAGCCCAGAGTTCCAGAATGCCCCTAATTCCGAACACCACAGGGTGAGTC	X	+	47748759-47748759:47752059-47752107	Xp11.23e	Homo sapiens sperm acrosome associated 5 (SPACA5), mRNA.				dJ54B20.3; UNQ6288; SLLP2; LYC5; LYZL5	dJ54B20.3; UNQ6288
Homo sapiens	RefSeq	NM_153280.1	ILMN_11281	UBE1	NM_153280.1	NM_153280.1		7317	23510339	NM_153280.1	UBE1	NP_695012.1	ILMN_1720764	0002850612	I	20	TTGCTCTTCCGTTGCCCCGTGGCTTCAGCTCATCTTTGGCAGGAAGGCGA	X	+	46935223-46935272	Xp11.3a	Homo sapiens ubiquitin-activating enzyme E1 (UBE1), transcript variant 2, mRNA.				UBA1A; A1S9; A1ST; UBE1X; MGC4781; A1S9T; UBA1; GXP1	UBA1A; A1S9; A1ST; UBE1X; MGC4781; A1S9T; UBA1; GXP1
Homo sapiens	Unigene	Hs.574453	ILMN_126634	HS.574453	Hs.574453		Hs.574453		10436778	AK024399			ILMN_1842065	0000510066	S	3747	GAGTATCAGAATCACCTGGAAGGGCTTTTACAGATTGCTGGCCCCACCCC	12	+	31039962-31039986:31039992-31040016		Homo sapiens cDNA FLJ14337 fis, clone PLACE4000494					
Homo sapiens	RefSeq	NM_002594.2	ILMN_20458	PCSK2	NM_002594.2	NM_002594.2		5126	20336243	NM_002594.2	PCSK2	NP_002585.2	ILMN_1695003	0007040019	S	4250	GGCCAGTGGAAATTCAGGTGAAAATGTTCATCAATTCCCATTGCATCACC	20	+	17411699-17411748	20p12.1a	Homo sapiens proprotein convertase subtilisin/kexin type 2 (PCSK2), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9020868] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8034613] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8034613] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The generation of a mature peptide hormone by posttranslational processing of a prohormone [goid 16486] [evidence IEA]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [evidence IEA]; The formation of mature insulin by proteolysis of the precursor preproinsulin. The signal sequence is first cleaved from preproinsulin to form proinsulin; proinsulin is then cleaved to release the C peptide, leaving the A and B chains of mature insulin linked by disulfide bridges [goid 30070] [pmid 7626024] [evidence IDA]; The formation of mature enkephalin, a pentapeptide hormone involved in regulating pain and nociception in the body by proteolytic processing of enkephalin propeptide [goid 34230] [evidence ISS]; The formation of mature islet amyloid polypeptide (IAPP) by posttranslational processing of pro-islet amyloid polypeptide (pro-IAPP) [goid 34231] [evidence ISS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7913882] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	SPC2; NEC2; PC2	SPC2; NEC2; PC2
Homo sapiens	RefSeq	NR_002166.1	ILMN_1258	TRAPPC2P1	NR_002166.1	NR_002166.1		10597	52317159	NR_002166.1	TRAPPC2P1		ILMN_2211122	0004590121	S	169	CGGAGTCCCCGCCGAAGAACCCGAGGAGCCATATATTGAAGACCATGTCT	19	+	57875047-57875071:57876183-57876207		Homo sapiens trafficking protein particle complex 2 pseudogene 1 (TRAPPC2P1), non-coding RNA.				SEDLP1; MIP-2A	SEDLP1; MIP-2A
Homo sapiens	RefSeq	NM_031435.1	ILMN_28079	THAP2	NM_031435.2	NM_031435.2		83591	141803531	NM_031435.2	THAP2	NP_113623.1	ILMN_1686461	0005720224	S	3629	TCTCTGTCTACTGGGCACCAACCTCTACAAAGAACCAGCCAAAGGCTAGG	12	+	70359591-70359640	12q21.1a	Homo sapiens THAP domain containing, apoptosis associated protein 2 (THAP2), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11256614] [evidence IDA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP564I0422	DKFZP564I0422
Homo sapiens	RefSeq	NM_000794.2	ILMN_171086	DRD1	NM_000794.3	NM_000794.3		1812	88758587	NM_000794.3	DRD1	NP_000785.1	ILMN_1773210	0006370152	S	2478	CAAACAGGGACACTACAAACATGGGGAGCCATAAGGGACATGTCTTTGGC	5	-	174868520-174868569	5q35.2c	Homo sapiens dopamine receptor D1 (DRD1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11500503] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2144334] [evidence IC ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amphetamine stimulus. Amphetamines consist of a group of compounds related to alpha-methylphenethylamine [goid 1975] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 1282671] [evidence IDA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7191] [evidence IEA]; The biosynthesis of a synapse [goid 7416] [evidence ISS]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IEA]; The specific actions or reactions of an organism relating to grooming, cleaning and brushing to remove dirt and parasites [goid 7625] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; Any process in an organism in which a change in behavior of an individual in response to repeated exposure to a visual cue [goid 8542] [evidence IEA]; Any process that initiates the activity of an inactive adenylate cyclase that is an integral part of the series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, resulting in a subsequent change in the concentration of cyclic AMP [goid 10580] [pmid 2144334] [evidence IDA]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence IEA]; The migration of GABAergic interneuron precursors from the subpallium to the cerebral cortex [goid 21853] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [evidence IEA]; A wavelike sequence of involuntary muscular contraction and relaxation that passes along a tubelike structure, such as the intestine, impelling the contents onwards [goid 30432] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30819] [pmid 7838121] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 30819] [pmid 1282671] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine [goid 42053] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the directed movement of potassium ions (K+) into, out of, within or between cells [goid 43268] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria [goid 51281] [pmid 7838121] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria [goid 51281] [pmid 1282671] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [pmid 1282671] [evidence IDA]; Any process that modulates the frequency, rate or extent of the directed movement of the catecholamine neurotransmitter dopamine into a cell [goid 51584] [pmid 8301582] [evidence IC ]; Any process that activates, maintains or increases the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 51968] [evidence ISS]; The process by which a startle magnitude is reduced when the startling stimulus is preceeded by a low-intensity prepulse [goid 60134] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [pmid 17194762] [evidence IGI]	A G-protein coupled receptor that binds dopamine and has the pharmacological characteristics of classic D1 receptors [goid 1590] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	DRD1A; DADR	DRD1A; DADR
Homo sapiens	RefSeq	NM_024966.2	ILMN_14314	SEMA6D	NM_153619.1	NM_153619.1		80031	24234743	NM_153619.1	SEMA6D	NP_705872.1	ILMN_1814494	0000870309	A	1605	CTCTGTCATTCATCAAATCTCATCCCCTGATGGACTCTGCCGTTCCACCC	15	+	45844195-45844244	15q21.1c	Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D (SEMA6D), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ11598; KIAA1479	FLJ11598; KIAA1479
Homo sapiens	RefSeq	XM_932857.1	ILMN_14314	SEMA6D	NM_153619.1	NM_153619.1		80031	24234743	NM_153619.1	SEMA6D	NP_705872.1	ILMN_1654540	0001110082	S	86	CCCACCGCCCACCCGGCTCCCGGTGTCTCCTCCCGGCCGCTCTACCCAGC	15	+	45798063-45798112	15q21.1c	Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D (SEMA6D), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ11598; KIAA1479	
Homo sapiens	RefSeq	NM_003004.1	ILMN_170524	SECTM1	NM_003004.2	NM_003004.2		6398	114155159	NM_003004.2	SECTM1	NP_002995.1	ILMN_1652277	0005360093	S	2227	AGGGGCGCGTTTGTGTCTCGGGTTAAAATAAGGTTCCGTCCGCGTGCTGG	17	-	80278905-80278954	17q25.3g	Homo sapiens secreted and transmembrane 1 (SECTM1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9480746] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9480746] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9480746] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9480746] [evidence TAS]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [pmid 9480746] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 9480746] [evidence TAS]	K12	K12
Homo sapiens	RefSeq	XM_942369.1	ILMN_177669	LOC731035	XM_001126365.1	XM_001126365.1		731035	113431382	XM_001126365.1	LOC731035	XP_001126365.1	ILMN_1712230	0006040450	I	416	ACAAGCATCTGGGGACACAAGGGGCCGTGACTGACAAGGAGAAGGAGCGT					PREDICTED: Homo sapiens hypothetical LOC731035 (LOC731035), mRNA.					
Homo sapiens	Unigene	Hs.539838	ILMN_104776	HS.539838	Hs.539838		Hs.539838		11599587	BF514408			ILMN_1909461	0000270121	S	398	CTTTGCCCTTGCATCAGGCACTTTCCTTGTGCTTGCTTCTGTGTGGCTCC	14	+	105453151-105453200		UI-H-BW1-ane-f-07-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3082117 3, mRNA sequence					
Homo sapiens	RefSeq	NM_016388.2	ILMN_24557	TRAT1	NM_016388.2	NM_016388.2		50852	54607136	NM_016388.2	TRAT1	NP_057472.2	ILMN_1684943	0000270338	S	766	GATGCACAGAGGACACAGAAGGACTTGGCAGCAGGGTGATGACCTGATCA	3	+	108572785-108572834	3q13.13a	Homo sapiens T cell receptor associated transmembrane adaptor 1 (TRAT1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12660731] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11390434] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9687533] [evidence TAS]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 11390434] [evidence IDA]	Any process that stops, prevents, or reduces the rate of receptor recyling [goid 1920] [pmid 11390434] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 9687533] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9687533] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [pmid 11390434] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50862] [pmid 11390434] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 51051] [pmid 11390434] [evidence IDA]	The binding activity of a molecule that brings together a transmembrane receptor protein kinase and one or more other molecules, permitting them to function in a coordinated way [goid 5068] [pmid 9687533] [evidence TAS]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [pmid 12660731] [evidence EXP]	TRIM; TCRIM; HSPC062	TRIM; TCRIM; HSPC062
Homo sapiens	RefSeq	NM_016388.2	ILMN_24557	TRAT1	NM_016388.2	NM_016388.2		50852	54607136	NM_016388.2	TRAT1	NP_057472.2	ILMN_2124833	0004760273	S	1310	CAAAAAGAGTTTAGGAATTCTACTAGCCAGAGATAGTCACTTGGAGAAAC	3	+	108573329-108573378	3q13.13a	Homo sapiens T cell receptor associated transmembrane adaptor 1 (TRAT1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12660731] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11390434] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9687533] [evidence TAS]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 11390434] [evidence IDA]	Any process that stops, prevents, or reduces the rate of receptor recyling [goid 1920] [pmid 11390434] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 9687533] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9687533] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [pmid 11390434] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell [goid 50862] [pmid 11390434] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 51051] [pmid 11390434] [evidence IDA]	The binding activity of a molecule that brings together a transmembrane receptor protein kinase and one or more other molecules, permitting them to function in a coordinated way [goid 5068] [pmid 9687533] [evidence TAS]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [pmid 12660731] [evidence EXP]	TRIM; TCRIM; HSPC062	TRIM; TCRIM; HSPC062
Homo sapiens	RefSeq	NR_015378.1	ILMN_336698	LOC401588	NR_015378.1	NR_015378.1		401588	168823570	NR_015378.1	LOC401588		ILMN_3247311	0005670541	S	1521	ATAGCCTCGGCTCAAAGGACCCTGGTCTCAAAGGACCCTGCCACCTTAGC	X	+	46407315-46407364	Xp11.3a	Homo sapiens hypothetical LOC401588 (LOC401588), non-coding RNA.					
Homo sapiens	RefSeq	XM_938234.1	ILMN_34820	LOC163233	XM_938234.1	XM_938234.1		163233	89057284	XM_938234.1	LOC163233	XP_943327.1	ILMN_1773236	0002970082	I	147	GAAGTCTAGAAATGGTAAGAGTACCGCCTGGGAGACAGAGCGAGACTCCG					PREDICTED: Homo sapiens similar to Zinc finger protein 93 (Zinc finger protein HTF34) (LOC163233), mRNA.					
Homo sapiens	RefSeq	NR_002999.2	ILMN_183218	SCARNA20	NR_002999.2	NR_002999.2		677681	95007007	NR_002999.2	SCARNA20		ILMN_3245471	0001170497	S	27	TCCCTGTTCTCCTTAGCCAAGGCTGGAGGCCAAGAGCAGCCCTCGAGGAT	17	-	58308930-58308979	17q23.2a	Homo sapiens small Cajal body-specific RNA 20 (SCARNA20), guide RNA.				ACA66	ACA66
Homo sapiens	RefSeq	NR_022006.1	ILMN_356586	KIAA0087	NR_022006.1	NR_022006.1		9808	182765458	NR_022006.1	KIAA0087		ILMN_3247375	0001440520	S	3989	GGTGAGTAGCCCAGCATGGTTTATCTCCAGCCCACAGCTCTTTCCCTGAA	7	-	26573021-26573070		Homo sapiens KIAA0087 (KIAA0087), non-coding RNA.					
Homo sapiens	Unigene	Hs.540255	ILMN_105044	HS.540255	Hs.540255		Hs.540255		83152776	DB299844			ILMN_1902378	0007650465	S	390	TGACATTTGAAAAGTTGTCCCAGCATTCCTCATAAGCATGTGTTGCTTTG	15	+	66351077-66351126		DB299844 BRACE3 Homo sapiens cDNA clone BRACE3027682 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006923.2	ILMN_29816	SDF2	NM_006923.2	NM_006923.2		6388	14141194	NM_006923.2	SDF2	NP_008854.2	ILMN_1713978	0000840768	S	826	AGCTTCAGCCCTGCACATTTGAACTAGTCACTCTCCCAGACTTGCGTGGG	17	-	26975806-26975855	17q11.2a	Homo sapiens stromal cell-derived factor 2 (SDF2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8918255] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 8918255] [evidence TAS]	Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein [goid 4169] [pmid 8918255] [evidence TAS]		
Homo sapiens	RefSeq	XR_000901.1	ILMN_36154	FLJ33996	XR_000901.1	XR_000901.1		283401	89035514	XR_000901.1	FLJ33996		ILMN_1674795	0007050400	A	3809	ACTGCTCCAACCACCCCCGCTTCTCATCACCAGGACAGCAGGTCGAGAAA	12	+	50492610-50492659		PREDICTED: Homo sapiens hypothetical protein FLJ33996 (FLJ33996), misc RNA.					
Homo sapiens	RefSeq	NM_014590.3	ILMN_7784	ERVWE1	NM_014590.3	NM_014590.3		30816	48949850	NM_014590.3	ERVWE1	NP_055405.3	ILMN_2079991	0006130053	S	2601	CCTGAGGAAATCTCAGCTGCACAACCTCTACTACGCCCCAATTCAGCAGG	7	-	92098088-92098137	7q21.2b	Homo sapiens endogenous retroviral family W, env(C7), member 1 (ERVWE1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The complete fully infectious extracellular virus particle [goid 19012] [evidence IEA]; The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]; The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]	The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division [goid 6949] [pmid 10693809] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10693809] [evidence TAS]; Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites [goid 32196] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	HERVW; HERV-7q; Env-W; HERV-W; env; HERV-W-ENV; syncytin	HERVW; HERV-7q; Env-W; HERV-W; env; HERV-W-ENV; syncytin
Homo sapiens	RefSeq	NM_014590.3	ILMN_7784	ERVWE1	NM_014590.3	NM_014590.3		30816	48949850	NM_014590.3	ERVWE1	NP_055405.3	ILMN_1785804	0003890315	S	2535	TACCGCAGACCCCTGGACCGGCCTGCTAGCCCACGATCTGATGTTAATGA	7	-	92098154-92098203	7q21.2b	Homo sapiens endogenous retroviral family W, env(C7), member 1 (ERVWE1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The complete fully infectious extracellular virus particle [goid 19012] [evidence IEA]; The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres [goid 19028] [evidence IEA]; The lipid bilayer and associated glycoproteins that surround many types of virus particle [goid 19031] [evidence IEA]	The formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane. Syncytia are normally derived from single cells that fuse or fail to complete cell division [goid 6949] [pmid 10693809] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10693809] [evidence TAS]; Any process involved in mediating the movement of discrete segments of DNA between nonhomologous sites [goid 32196] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	HERVW; HERV-7q; Env-W; HERV-W; env; HERV-W-ENV; syncytin	HERVW; HERV-7q; Env-W; HERV-W; env; HERV-W-ENV; syncytin
Homo sapiens	Unigene	Hs.549914	ILMN_110104	HS.549914	Hs.549914		Hs.549914		6044546	AW088717			ILMN_1834568	0004260193	S	123	gggggAGGCGGGCCTGGGCAATTTCGGAACTAGGAAAAACCCCGTCGGCA					xd29a02.x1 NCI_CGAP_Ov23 Homo sapiens cDNA clone IMAGE:2595146 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001080474.1	ILMN_174703	C2ORF78	NM_001080474.1	NM_001080474.1		388960	122937340	NM_001080474.1	C2orf78	NP_001073943.1	ILMN_2280542	0002570086	I	2351	CGTAGGCCTGCTGTGGCTTACCCTGCTCGACCTGATTCTACTAACTCAGC	2	+	73897088-73897137	2p13.2a	Homo sapiens chromosome 2 open reading frame 78 (C2orf78), mRNA.					
Homo sapiens	RefSeq	NM_015544.2	ILMN_12943	TMEM98	NM_015544.2	NM_015544.2		26022	75677342	NM_015544.2	TMEM98	NP_056359.2	ILMN_1652456	0006040600	I	352	GTGGAGGAACCTAGCACCTGCCATCCTCTTCCCCAATTTGCCACTTCCAG	17	+	28282481-28282530	17q11.2e	Homo sapiens transmembrane protein 98 (TMEM98), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZP564K1964	DKFZP564K1964
Homo sapiens	RefSeq	XM_943275.1	ILMN_309516	ASXL3	NM_030632.1	NM_030632.1		80816	149944525	NM_030632.1	ASXL3	NP_085135.1	ILMN_1736957	0002340133	A	899	TACCTCCTGCTTTTGCTCCCAGAAGTGGATAGGCAGATGGGAAGTGATGG	18	+	29517495-29517530:29565930-29565943	18q12.1f	Homo sapiens additional sex combs like 3 (Drosophila) (ASXL3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1713	
Homo sapiens	RefSeq	NM_001080516.1	ILMN_183547	GRXCR2	NM_001080516.1	NM_001080516.1		643226	122937473	NM_001080516.1	GRXCR2	NP_001073985.1	ILMN_2304020	0007330687	A	686	CCCTGAGGTGCCCTGCCTGCAATGAGAATGGCCTACAGCCTTGCCAGATT	5	-	145239307-145239356	5q32c	Homo sapiens glutaredoxin, cysteine rich 2 (GRXCR2), mRNA.					
Homo sapiens	RefSeq	NM_001080516.1	ILMN_183547	GRXCR2	NM_001080516.1	NM_001080516.1		643226	122937473	NM_001080516.1	GRXCR2	NP_001073985.1	ILMN_3236728	0007400491	S	488	GCTATGGAGGCAGGGACCAGCACGATAGACCTTTGGTGGAGGCAGAAAGC	5	-	145246090-145246139	5q32c	Homo sapiens glutaredoxin, cysteine rich 2 (GRXCR2), mRNA.					
Homo sapiens	RefSeq	NM_001080536.1	ILMN_162599	LOC653566	NM_001080536.1	NM_001080536.1		653566	122937505	NM_001080536.1	LOC653566	NP_001074005.1	ILMN_2408645	0007040068	A	135	AGTGGCCGTAGCGGCTTGTTGGATAAGTGGAAGATAGATGATAAGCCTGT				1p35.3b	Homo sapiens similar to Signal peptidase complex subunit 2 (Microsomal signal peptidase 25 kDa subunit) (SPase 25 kDa subunit) (LOC653566), mRNA.					
Homo sapiens	RefSeq	NM_001001556.1	ILMN_181436	GALK2	NM_001001556.1	NM_001001556.1		2585	48527956	NM_001001556.1	GALK2	NP_001001556.1	ILMN_1732514	0005670121	I	156	CTCATTCCGGTGAAAGTAAGGGACAGCTTAGGACCAGAAGCCTTTCGCGG	15	+	47235423-47235472	15q21.1d	Homo sapiens galactokinase 2 (GALK2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-galactose = ADP + D-galactose 1-phosphate [goid 4335] [pmid 7542884] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + N-acetyl-D-galactosamine = ADP + N-acetyl-alpha-D-galactosamine 1-phosphate [goid 33858] [evidence IEA]	GK2; MGC1745	GK2; MGC1745
Homo sapiens	RefSeq	NM_001001556.1	ILMN_181436	GALK2	NM_001001556.1	NM_001001556.1		2585	48527956	NM_001001556.1	GALK2	NP_001001556.1	ILMN_1723124	0004070706	A	2874	CACAGATTGGGCATCACCATCTAGAATTTCAGTTTAAGGGAGGCCTGCGC	15	+	47408960-47409009	15q21.1d	Homo sapiens galactokinase 2 (GALK2), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process of introducing a phosphate group into a carbohydrate, any organic compound based on the general formula Cx(H2O)y [goid 46835] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + D-galactose = ADP + D-galactose 1-phosphate [goid 4335] [pmid 7542884] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + N-acetyl-D-galactosamine = ADP + N-acetyl-alpha-D-galactosamine 1-phosphate [goid 33858] [evidence IEA]	GK2; MGC1745	GK2; MGC1745
Homo sapiens	RefSeq	XM_001717746.1	ILMN_349239	LOC646057	XM_001717746.1	XM_001717746.1		646057	169209366	XM_001717746.1	LOC646057	XP_001717798.1	ILMN_3292168	0005050296	M	825	CAGGGGCAGGGGGCGGTTTCCTTTCTCAGATGCAGGAGGCAGGTTTGTTT				15q11.2a	PREDICTED: Homo sapiens similar to hCG2042717 (LOC646057), mRNA.					
Homo sapiens	RefSeq	XM_929053.1	ILMN_18613	LOC388503	NM_001013640.3	NM_001013640.3		388503	147906974	NM_001013640.3	LOC388503	NP_001013662.1	ILMN_1707433	0003460435	S	2494	ATGCAGAAGCTGGAGCTGGGCCGGTACAATGAGACACACGCCATAGCCAA	19	+	10033559-10033608	19p13.2c	Homo sapiens similar to Complement C3 precursor (LOC388503), mRNA.					
Homo sapiens	RefSeq	XM_935481.1	ILMN_46325	LOC641714	XM_935481.1	XM_935481.1		641714	89027405	XM_935481.1	LOC641714	XP_940574.1	ILMN_1671701	0005130554	S	91	ATTGAAAACCCCGCTGATGTCAGTGTCATACCCTCCAGAAATACTGGCCA					PREDICTED: Homo sapiens similar to monoacylglycerol O-acyltransferase 2 (LOC641714), mRNA.					
Homo sapiens	RefSeq	NM_001013257.1	ILMN_25960	BCAM	NM_001013257.1	NM_001013257.1		4059	61742796	NM_001013257.1	BCAM	NP_001013275.1	ILMN_1705653	0004890246	I	2148	CAATCCCAACCCTGCCCCCAATCTCCCCTCAACTCCAATCCATAACCCCC	19	+	45323324-45323373	19q13.32a	Homo sapiens basal cell adhesion molecule (Lutheran blood group) (BCAM), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9166867] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7777537] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7954395] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7777537] [evidence TAS]	Combining with a laminin, a glycoprotein that constitutes the majority of proteins in the basement membrane, to initiate a change in cell activity [goid 5055] [evidence IEA]; Combining with a laminin, a glycoprotein that constitutes the majority of proteins in the basement membrane, to initiate a change in cell activity [goid 5055] [evidence IEA]	AU; CD239; LU; MSK19	AU; CD239; LU; MSK19
Homo sapiens	RefSeq	NM_020165.2	ILMN_25868	RAD18	NM_020165.2	NM_020165.2		56852	14550404	NM_020165.2	RAD18	NP_064550.2	ILMN_1707548	0005420681	S	2501	TGGCATTTCAGAGCCAGCATCCCCCAACTCCCACCCCTCTGCCATCACCC	3	-	8897055-8897104	3p25.3d	Homo sapiens RAD18 homolog (S. cerevisiae) (RAD18), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10884424] [evidence NAS]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 10884424] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [pmid 10884424] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF73	RNF73
Homo sapiens	RefSeq	NM_019106.4	ILMN_4065	SEPT3	NM_019106.4	NM_019106.4		55964	38788093	NM_019106.4	SEPT3	NP_061979.2	ILMN_1659953	0006040066	A	4384	CAACCAAGTCCTGATGGAGCAAGAGGCCCACGCCTAGGGGATGCAAGAAC	22	+	40723964-40724013	22q13.2b	Homo sapiens septin 3 (SEPT3), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	SEP3; MGC133218; bK250D10.3	SEP3; MGC133218; bK250D10.3
Homo sapiens	RefSeq	NM_019106.4	ILMN_4065	SEPT3	NM_019106.4	NM_019106.4		55964	38788093	NM_019106.4	SEPT3	NP_061979.2	ILMN_1746673	0004890021	I	4437	CCGTTTCTTAAATGTTACCAGTCCCAGCCAATCTTACGGTGACATTACAG	22	+	40724017-40724066	22q13.2b	Homo sapiens septin 3 (SEPT3), transcript variant B, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	SEP3; MGC133218; bK250D10.3	SEP3; MGC133218; bK250D10.3
Homo sapiens	RefSeq	NM_000046.2	ILMN_180341	ARSB	NM_000046.2	NM_000046.2		411	38569404	NM_000046.2	ARSB	NP_000037.2	ILMN_2242937	0000270215	I	5826	GTGTCAGCCATATGTATGGGGCTTCCATTTGGGGTGATGAGAAAGTTCTG	5	-	78108988-78109037	5q14.1c	Homo sapiens arylsulfatase B (ARSB), transcript variant 1, mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 2303452] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [pmid 1718978] [evidence TAS]; The directed movement of substances into, out of or within a lysosome [goid 7041] [pmid 2303452] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: RSO-R' + H2O = RSOOH + R'H. This reaction is the hydrolysis of any sulfuric ester bond, any ester formed from sulfuric acid, O=SO(OH)2 [goid 8484] [evidence IEA]; Catalysis of the hydrolysis of the 4-sulfate groups of the N-acetyl-D-galactosamine 4-sulfate units of chondroitin sulfate and dermatan sulfate [goid 3943] [evidence IEA]; Catalysis of the reaction: a phenol sulfate + H2O = a phenol + SO4(2-) (sulfate) [goid 4065] [pmid 2303452] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MPS6; ASB; G4S	MPS6; ASB; G4S
Homo sapiens	RefSeq	NM_182483.1	ILMN_25808	NSFL1C	NM_182483.1	NM_182483.1		55968	33286433	NM_182483.1	NSFL1C	NP_872289.1	ILMN_2366719	0007320328	A	3316	CGGCAGTGGCCTGCTGGGGCAATGGCATCTGTCACGGTGTTTTCTCCAGC	20	-	1422896-1422945	20p13e	Homo sapiens NSFL1 (p97) cofactor (p47) (NSFL1C), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]		Interacting selectively with a lipid [goid 8289] [evidence IEA]	UBXD10; p47; MGC3347; dJ776F14.1; UBX1	dJ776F14.1; UBX1; UBXD10; p47; MGC3347
Homo sapiens	RefSeq	NM_024757.3	ILMN_18594	EHMT1	NM_024757.3	NM_024757.3		79813	40217807	NM_024757.3	EHMT1	NP_079033.3	ILMN_1812273	0002900228	I	3162	TACTGCGTGTGCATCGACGACTGCTCCTCCAGCAACTGCATGTGCGGCCA	9	+	139828704-139828753	9q34.3f-q34.3g	Homo sapiens euchromatic histone-lysine N-methyltransferase 1 (EHMT1), mRNA. XM_946126 XM_946128 XM_946130 XM_946133	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12004135] [evidence IC ]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12004135] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [pmid 12004135] [evidence IDA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [pmid 12004135] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [pmid 12004135] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp667M072; FP13812; EUHMTASE1; KIAA1876; RP11-188C12.1; KMT1D; FLJ12879; GLP; bA188C12.1; Eu-HMTase1	DKFZp667M072; FP13812; EUHMTASE1; KIAA1876; RP11-188C12.1; KMT1D; FLJ12879; GLP; bA188C12.1; Eu-HMTase1
Homo sapiens	RefSeq	NM_002254.5	ILMN_22353	KIF3C	NM_002254.6	NM_002254.6		3797	133930788	NM_002254.6	KIF3C	NP_002245.4	ILMN_1797277	0002450202	S	5021	CAGTGTAAGATCTGCTGGGAACAGGGCCACCAGGAGTGGCTGGATCTCAG	2	-	26149815-26149864	2p23.3b	Homo sapiens kinesin family member 3C (KIF3C), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [pmid 9480755] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	XM_935549.1	ILMN_32652	LOC392781	XM_935549.1	XM_935549.1		392781	89027489	XM_935549.1	LOC392781	XP_940642.1	ILMN_1710323	0006370121	A	248	TTGCAAGGTGACAGACGGCTCCGTGCTAGTGCGCCTCATCCCCGTGTCCA				7q31.33a	PREDICTED: Homo sapiens similar to 40S ribosomal protein S2 (LOC392781), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The smaller of the two subunits of a ribosome [goid 15935] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Homo sapiens	RefSeq	NM_005918.2	ILMN_23557	MDH2	NM_005918.2	NM_005918.2		4191	21735620	NM_005918.2	MDH2	NP_005909.2	ILMN_2079004	0006420369	S	1227	CCTTCCAAATTGTGGGTGGCTCTGTGGGCGCATCAATAAAAGCCGTCCTT	7	+	75533788-75533837	7q11.23e	Homo sapiens malate dehydrogenase 2, NAD (mitochondrial) (MDH2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16740313] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 9792662] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [pmid 16740313] [evidence IDA]; The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle [goid 6108] [pmid 6576816] [evidence IMP]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Also oxidizes some other 2-hydroxydicarboxylic acids [goid 30060] [pmid 16740313] [evidence IDA]; Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Also oxidizes some other 2-hydroxydicarboxylic acids [goid 30060] [pmid 6576816] [evidence IMP]; Catalysis of the reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Also oxidizes some other 2-hydroxydicarboxylic acids [goid 30060] [pmid 9792662] [evidence EXP]	MOR1; MDH; M-MDH; MGC:3559	MOR1; MDH; M-MDH; MGC:3559
Homo sapiens	RefSeq	NM_019026.2	ILMN_8084	TMCO1	NM_019026.2	NM_019026.2		54499	68131549	NM_019026.2	TMCO1	NP_061899.1	ILMN_1793829	0001470209	S	972	CGACTCTCAAGGCACTGTGTATGCCCTGCAAGTTGGCTGTCTATGAGCAT	1	-	163963529-163963578	1q24.1a	Homo sapiens transmembrane and coiled-coil domains 1 (TMCO1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HP10122; TMCC4; RP11-466F5.7; PCIA3; PNAS-136	HP10122; TMCC4; RP11-466F5.7; PCIA3; PNAS-136
Homo sapiens	RefSeq	XM_001722336.1	ILMN_342899	LOC100133737	XM_001722336.1	XM_001722336.1		100133737	169179689	XM_001722336.1	LOC100133737	XP_001722388.1	ILMN_3241977	0001030437	S	187	AAGGCAGGCTTGGTGGATGACTTTGAGAAGAAGTTTAATGCCCTGAAGTT					PREDICTED: Homo sapiens similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d (LOC100133737), mRNA.					
Homo sapiens	RefSeq	XR_040339.1	ILMN_345508	FAM71E2	XR_040339.1	XR_040339.1		284418	169214420	XR_040339.1	FAM71E2		ILMN_3232949	0001690731	I	1884	AGCCCGTGGAGCCGCCCAACTTCGCAGAGATTAAAGCTTGAGCCTGAGAC				19q13.42b	PREDICTED: Homo sapiens misc_RNA (FAM71E2), miscRNA.					
Homo sapiens	RefSeq	NM_172215.1	ILMN_9437	CAMKK2	NM_172215.1	NM_172215.1		10645	27437022	NM_172215.1	CAMKK2	NP_757364.1	ILMN_2367638	0002000020	A	1657	GGAAGTGCCCACCCTCAAACCACTCTCTGAAGACCAGGCCCGTTTCTACT	12	-	120177765-120177814	12q24.31b	Homo sapiens calcium/calmodulin-dependent protein kinase kinase 2, beta (CAMKK2), transcript variant 6, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11395482] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 11395482] [evidence TAS]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 11395482] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [pmid 11395482] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 11395482] [evidence TAS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 11395482] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [pmid 11395482] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 11395482] [evidence IDA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 11395482] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC15254; CAMKK; CAMKKB; KIAA0787	MGC15254; CAMKK; CAMKKB; KIAA0787
Homo sapiens	RefSeq	XM_940450.1	ILMN_44681	LOC651315	XM_940450.1	XM_940450.1		651315	89031839	XM_940450.1	LOC651315	XP_945543.1	ILMN_2091717	0003390685	S	11	AGGCCAATTGCGCCTCGCTTCTGGCGGTCTTCCACAGCGACTCACTGCTG					PREDICTED: Homo sapiens similar to patched domain containing 3 (LOC651315), mRNA.					
Homo sapiens	RefSeq	NM_006154.1	ILMN_27071	NEDD4	NM_006154.2	NM_006154.2		4734	114520608	NM_006154.2	NEDD4	NP_006145.2	ILMN_1807881	0000520138	I	58	TCCGGTTTGCTGGAAGCGTTCGGAAATGGCAACTTGCGCGGTGGAGGTGT	15	-	56285728-56285753:56285754-56285777	15q21.3c	Homo sapiens neural precursor cell expressed, developmentally down-regulated 4 (NEDD4), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17719543] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	KIAA0093; MGC176705	KIAA0093
Homo sapiens	RefSeq	NM_198400.1	ILMN_27071	NEDD4	NM_006154.2	NM_006154.2		4734	114520608	NM_006154.2	NEDD4	NP_006145.2	ILMN_1703140	0005560576	A	5246	ACTGCCACCAGTCCCCAGCTGCAGACCTTCATCCCCTTCATCTCCCACTA	15	-	56119584-56119633	15q21.3c	Homo sapiens neural precursor cell expressed, developmentally down-regulated 4 (NEDD4), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17719543] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	KIAA0093; MGC176705	KIAA0093
Homo sapiens	RefSeq	XM_945953.1	ILMN_44856	C1ORF185	XM_209252.6	XM_209252.6		284546	113408655	XM_209252.6	C1orf185	XP_209252.4	ILMN_1708393	0006130491	A	34	ACCTATTTTCTTGCTGCTGGTGCTGTCACTTTGGGAATTGGTTTCTTTGC	1	+	51350741-51350790	1p32.3e	PREDICTED: Homo sapiens chromosome 1 open reading frame 185, transcript variant 1 (C1orf185), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_002178.2	ILMN_5216	IGFBP6	NM_002178.2	NM_002178.2		3489	49574524	NM_002178.2	IGFBP6	NP_002169.1	ILMN_1669362	0007380719	S	582	GCAACTCCAGACTGAGGTCTACCGAGGGGCTCAAACACTCTACGTGCCCA	12	+	51781127-51781176	12q13.13e	Homo sapiens insulin-like growth factor binding protein 6 (IGFBP6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10087296] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7539002] [evidence TAS]	Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [evidence IEA]	IBP6	IBP6
Homo sapiens	RefSeq	NM_005269.1	ILMN_16463	GLI1	NM_005269.1	NM_005269.1		2735	4885278	NM_005269.1	GLI1	NP_005260.1	ILMN_1779989	0001410369	S	3318	CCCCAACATGGCTGTGGGCAACATGAGTGTCTTACTGAGATCCCTACCTG	12	+	56152030-56152079	12q13.3b	Homo sapiens glioma-associated oncogene homolog 1 (zinc finger protein) (GLI1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10504446] [evidence IDA]	The process whereby a relatively unspecialized cell acquires the specialized features of an osteoblast, the mesodermal cell that gives rise to bone [goid 1649] [pmid 12165851] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate [goid 7418] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 12165851] [evidence IMP]; Any process that modulates the frequency, rate or extent of smoothened signaling [goid 8589] [pmid 11238441] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of an epidermal cell, any of the cells making up the epidermis [goid 9913] [pmid 12165851] [evidence IDA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along a proximal/distal axis [goid 9954] [evidence IEA]; The process by which the anatomical structure of the cranial nerves are generated and organized. Morphogenesis pertains to the creation of form. The cerebellar cortex is a thin mantle of gray matter that covers the surface of each cerebral hemisphere. It has a characteristic morphology with convolutions (gyri) and crevices (sulci) that have specific functions. Six layers of nerve cells and the nerve pathways that connect them comprise the cerebellar cortex. Together, these regions are responsible for the processes of conscious thought, perception, emotion and memory as well as advanced motor function [goid 21696] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened in granule cells that contributes to the regulation of proliferation of the cells [goid 21938] [evidence IEA]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 12165851] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 12165851] [evidence IDA]; The developmental process by which the stucture of the notochord is destroyed in an embryo [goid 60032] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9118802] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10806483] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10564661] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11238441] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 12165851] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	GLI	GLI
Homo sapiens	RefSeq	NM_000879.2	ILMN_8746	IL5	NM_000879.2	NM_000879.2		3567	28559032	NM_000879.2	IL5	NP_000870.1	ILMN_2207190	0004830327	S	358	GTGGAGAAGAAAGACGGAGAGTAAACCAATTCCTAGACTACCTGCAAGAG	5	-	131905443-131905492	5q31.1b	Homo sapiens interleukin 5 (colony-stimulating factor, eosinophil) (IL5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3024129] [evidence TAS]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 3498940] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-5 receptor [goid 5137] [pmid 3024129] [evidence TAS]	EDF; TRF; IL-5	EDF; TRF; IL-5
Homo sapiens	RefSeq	NM_000879.2	ILMN_8746	IL5	NM_000879.2	NM_000879.2		3567	28559032	NM_000879.2	IL5	NP_000870.1	ILMN_1709300	0007040605	S	249	CAGGGAATAGGCACACTGGAGAGTCAAACTGTGCAAGGGGGTACTGTGGA	5	-	131905657-131905706	5q31.1b	Homo sapiens interleukin 5 (colony-stimulating factor, eosinophil) (IL5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3024129] [evidence TAS]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 3498940] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the phosphorylation of peptidyl-tyrosine [goid 50731] [evidence ISS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the interleukin-5 receptor [goid 5137] [pmid 3024129] [evidence TAS]	EDF; TRF; IL-5	EDF; TRF; IL-5
Homo sapiens	RefSeq	XM_944021.1	ILMN_38681	LOC643684	XM_944021.2	XM_944021.2		643684	113414130	XM_944021.2	LOC643684	XP_949114.1	ILMN_1780566	0002690646	S	1384	ATATAGTAATCTACATGTAATTTTATATGTATCCTATTACATGGTTGAAA				2q31.1c	PREDICTED: Homo sapiens hypothetical LOC643684 (LOC643684), mRNA.					
Homo sapiens	RefSeq	NM_001012267.1	ILMN_5901	CENPP	NM_001012267.1	NM_001012267.1		401541	59709757	NM_001012267.1	CENPP	NP_001012267.1	ILMN_1748241	0006250196	S	1264	GTCCCACAGCGAGCCCTGGAGCTGGACAAGAACAGAGCCATAGAAACTGC	9	+	94414705-94414717:94415122-94415158	9q22.31a-q22.31b	Homo sapiens centromere protein P (CENPP), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]			RP11-19J3.3; FLJ33928; CENP-P	RP11-19J3.3; FLJ33928; CENP-P
Homo sapiens	RefSeq	NM_207481.2	ILMN_15391	FLJ34870	NM_207481.2	NM_207481.2		401013	76443697	NM_207481.2	FLJ34870	NP_997364.2	ILMN_1691212	0005700470	S	2050	CTTCCACGAAACTGGTCCTTGGTGCCAAAAATGTTGAAGACCACTGCCCC	2	-	133399102-133399151	2q21.2b-q21.2c	Homo sapiens FLJ34870 protein (FLJ34870), mRNA.					
Homo sapiens	RefSeq	NM_032966.1	ILMN_19896	CXCR5	NM_032966.1	NM_032966.1		643	14589868	NM_032966.1	CXCR5	NP_116743.1	ILMN_2337931	0005290647	A	2284	GAAGGGGCCCGTGGGAGTCATCTCAACCATCCCCTCCGTGGCATCACCTT	11	+	118271594-118271643	11q23.3e	Homo sapiens chemokine (C-X-C motif) receptor 5 (CXCR5), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1425907] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 1425907] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 1425907] [evidence TAS]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	BLR1; MDR15; MGC117347; CXCR5; CD185	BLR1; MDR15; MGC117347; CXCR5; CD185
Homo sapiens	RefSeq	NM_032966.1	ILMN_19896	CXCR5	NM_032966.1	NM_032966.1		643	14589868	NM_032966.1	CXCR5	NP_116743.1	ILMN_2337928	0003890400	A	2621	GTGAGAGTGTCTTCACGGCAGGACAACGAGGAAGCCCTAAGACGTCCCTT	11	+	118271931-118271980	11q23.3e	Homo sapiens chemokine (C-X-C motif) receptor 5 (CXCR5), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1425907] [evidence TAS]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 1425907] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 1425907] [evidence TAS]; The change in morphology and behavior of a mature or immature B cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42113] [evidence IEA]; The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes [goid 48535] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4945] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [evidence IEA]	BLR1; MDR15; MGC117347; CXCR5; CD185	BLR1; MDR15; MGC117347; CXCR5; CD185
Homo sapiens	RefSeq	NM_001037330.1	ILMN_13068	TRIM16L	NM_001037330.1	NM_001037330.1		147166	82617563	NM_001037330.1	TRIM16L	NP_001032407.1	ILMN_2193443	0006510373	S	1753	GATGCACTCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA	17	+	18579927-18579976	17p11.2f	Homo sapiens tripartite motif-containing 16-like (TRIM16L), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			TRIM70	TRIM70
Homo sapiens	RefSeq	NM_001080488.1	ILMN_180935	ONECUT3	NM_001080488.1	NM_001080488.1		390874	122937423	NM_001080488.1	ONECUT3	NP_001073957.1	ILMN_2067444	0006650356	S	1262	TCACCGACCTGCAGCGACGCACGCTGATCGCCATCTTCAAGGAGAACAAG	19	+	1726221-1726270	19p13.3h	Homo sapiens one cut homeobox 3 (ONECUT3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	Unigene	Hs.519644	ILMN_99629	HS.519644	Hs.519644		Hs.519644		21733760	AL833138			ILMN_1864204	0001340543	S	2088	TTGGCCCTATGGTGGGCAAACTACAGCCTACAGGCCAATTCCAGCCTACC	5	+	142120601-142120650		Homo sapiens mRNA; cDNA DKFZp313A1040 (from clone DKFZp313A1040)					
Homo sapiens	RefSeq	XM_945836.1	ILMN_2101	TCP10	NM_004610.3	NM_004610.3		6953	105553087	NM_004610.3	TCP10	NP_004601.3	ILMN_1802821	0000270541	A	582	ACTCTCCTGGGACAAAGATGGTCATCTAACCACTTAGCTCCTCCAAAGCC	6	-	167790190-167790192:167791443-167791489	6q27d	Homo sapiens t-complex 10 homolog (mouse) (TCP10), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8111376] [evidence TAS]			MGC34049	
Homo sapiens	RefSeq	NM_004610.3	ILMN_2101	TCP10	NM_004610.3	NM_004610.3		6953	105553087	NM_004610.3	TCP10	NP_004601.3	ILMN_2041355	0001010437	S	1128	GGTTTCCCGAGTGAATTTCCAGGAGCTCTGCACGCCGCTCCCTCCAGACA	6	-	167786672-167786721	6q27d	Homo sapiens t-complex 10 homolog (mouse) (TCP10), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8111376] [evidence TAS]			MGC34049	MGC34049
Homo sapiens	RefSeq	NM_015221.1	ILMN_15623	DNMBP	NM_015221.1	NM_015221.1		23268	39930350	NM_015221.1	DNMBP	NP_056036.1	ILMN_1702443	0004490465	S	4349	CAGATGTAGCTAGAGATGTAAAGCAGCCCACTGCCACGCCGAGGAGCTAC	10	-	101629707-101629756	10q24.2c	Homo sapiens dynamin binding protein (DNMBP), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TUBA; RP11-114F7.3; KIAA1010	TUBA; RP11-114F7.3; KIAA1010
Homo sapiens	RefSeq	NM_024501.1	ILMN_12865	HOXD1	NM_024501.1	NM_024501.1		3231	13375631	NM_024501.1	HOXD1	NP_078777.1	ILMN_1717381	0003890735	S	1728	GCGGTTTCTACCTCTCTATGTGCCTGAGTGATGATACAATCGCTGTTTAG	2	+	176763634-176763683	2q31.1h	Homo sapiens homeobox D1 (HOXD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-4.7; HOX4G; HOX4	HOX4G; HOX4; Hox-4.7
Homo sapiens	RefSeq	NM_014495.2	ILMN_27994	ANGPTL3	NM_014495.2	NM_014495.2		27329	41327750	NM_014495.2	ANGPTL3	NP_055310.1	ILMN_1695193	0001050561	S	1230	CTGTCCAGAGGGTTATTCAGGAGGCTGGTGGTGGCATGATGAGTGTGGAG	1	+	62842475-62842494:62842892-62842921	1p31.3d	Homo sapiens angiopoietin-like 3 (ANGPTL3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 17110602] [evidence IDA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [pmid 12565906] [evidence IDA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [pmid 12565906] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 11877390] [evidence IPI]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [pmid 11877390] [evidence NAS]; The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [pmid 17110602] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [pmid 17110602] [evidence IDA]; Any process that decreases the frequency, rate or extent of phospholipase activity, the hydrolysis of a phospholipid [goid 10519] [pmid 17110602] [evidence IDA]; The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development [goid 19915] [pmid 12565906] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 11877390] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of cholesterol within an organism or cell [goid 42632] [pmid 17110602] [evidence IDA]; Any process that activates or increases angiogenesis [goid 45766] [pmid 11877390] [evidence IDA]; The process by which the anatomical structures of arterial blood vessels are generated and organized. Morphogenesis pertains to the creation of form. Arteries are blood vessels that transport blood from the heart to the body and its organs [goid 48844] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of lipids [goid 50996] [pmid 12565906] [evidence IDA]; Any process that stops or reduces the activity of the enzyme lipoprotein lipase [goid 51005] [pmid 17110602] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of acylglycerol within an organism or cell [goid 55090] [pmid 17110602] [evidence IDA]; Any process involved in the maintenance of an internal equilibrium of phospholipid within an organism or cell [goid 55091] [pmid 17110602] [evidence IDA]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [evidence ISS]; Stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid [goid 4859] [pmid 17110602] [evidence IDA]; Interacting selectively with an integrin [goid 5178] [pmid 11877390] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 11877390] [evidence IDA]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 12565906] [evidence IDA]	ANGPT5	ANGPT5
Homo sapiens	RefSeq	NM_015214.1	ILMN_22988	DDHD2	NM_015214.1	NM_015214.1		23259	54792779	NM_015214.1	DDHD2	NP_056029.1	ILMN_1705871	0002070010	S	2507	GCTGCGTCATTTCCTGCATGTTGCCTGCCACTTACTCACCACTGGGGTCT	8	+	38237340-38237389	8p12a	Homo sapiens DDHD domain containing 2 (DDHD2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SAMWD1; KIAA0725	SAMWD1; KIAA0725
Homo sapiens	RefSeq	NM_015214.1	ILMN_22988	DDHD2	NM_015214.1	NM_015214.1		23259	54792779	NM_015214.1	DDHD2	NP_056029.1	ILMN_2179063	0000050671	S	3225	TGTAAAAGCTGATGAACCTGAAATTGTGTAGCCTCTACAGGCTGCTGAGG	8	+	38238058-38238107	8p12a	Homo sapiens DDHD domain containing 2 (DDHD2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SAMWD1; KIAA0725	SAMWD1; KIAA0725
Homo sapiens	RefSeq	NM_201647.1	ILMN_24470	STAMBP	NM_006463.3	NM_006463.3		10617	42519910	NM_006463.3	STAMBP	NP_006454.1	ILMN_1739253	0001740364	A	1951	CTGGGGTGAGGGACAGCTTACTCCATTTGACCAGATTGTTTGGCTAACAC	2	+	73943381-73943430	2p13.1b	Homo sapiens STAM binding protein (STAMBP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10383417] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 10383417] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10383417] [evidence TAS]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14755250] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10383417] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126518; AMSH; MGC126516	MGC126518; AMSH; MGC126516
Homo sapiens	RefSeq	NM_006463.3	ILMN_24470	STAMBP	NM_006463.3	NM_006463.3		10617	42519910	NM_006463.3	STAMBP	NP_006454.1	ILMN_2391355	0004880671	A	1354	TCCTGTCGCCAGAAAGGATTTCATCCACACAGCAAGGATCCACCTCTGTT	2	+	73940733-73940782	2p13.1b	Homo sapiens STAM binding protein (STAMBP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10383417] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence IEA]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [pmid 10383417] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10383417] [evidence TAS]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14755250] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10383417] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126518; AMSH; MGC126516	MGC126518; AMSH; MGC126516
Homo sapiens	RefSeq	XR_037182.1	ILMN_337720	LOC100132112	XR_037182.1	XR_037182.1		100132112	169170114	XR_037182.1	LOC100132112		ILMN_3238001	0004560021	S	455	TGGGCCTCCCGGCGGCCTCTGCAGGCCCAAGTGGTCCTGAAGTCAGCCTC	7	+	62849578-62849627	7q11.21b	PREDICTED: Homo sapiens misc_RNA (LOC100132112), partial miscRNA.					
Homo sapiens	RefSeq	XM_001721550.1	ILMN_352033	LOC100128361	XM_001721550.1	XM_001721550.1		100128361	169178978	XM_001721550.1	LOC100128361	XP_001721602.1	ILMN_3272826	0000160349	M	1976	CTCCCTTTTAACCACTCCCCTCAATTGCATATAACCTGGAGGATCTGGCG				9q22.31b	PREDICTED: Homo sapiens similar to hCG1985411 (LOC100128361), mRNA.					
Homo sapiens	RefSeq	NM_020872.1	ILMN_183970	CNTN3	NM_020872.1	NM_020872.1		5067	75709183	NM_020872.1	CNTN3	NP_065923.1	ILMN_1717599	0001660367	S	4245	CCCACCATCTATCTGAGTGAGTCTGGCAGGCTTTTTAGTTCCTGAGTTAA	3	-	74399153-74399202	3p12.3d	Homo sapiens contactin 3 (plasmacytoma associated) (CNTN3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PANG; KIAA1496; PCS; BIG-1	PANG; KIAA1496; PCS; BIG-1
Homo sapiens	RefSeq	NM_198445.1	ILMN_42434	RINL	NM_198445.2	NM_198445.2		126432	90855785	NM_198445.2	RINL	NP_940847.1	ILMN_1790962	0002900474	S	1692	TGCCCTTTAAGGAGCCATGGGCAGAAGAGACTGTGACAGGGACCAGTGAC	19	-	44051589-44051638	19q13.2a	Homo sapiens Ras and Rab interactor-like (RINL), mRNA.				FLJ44131	
Homo sapiens	RefSeq	XM_291344.5	ILMN_309680	MAP7D3	NM_024597.2	NM_024597.2		79649	147903301	NM_024597.2	MAP7D3	NP_078873.2	ILMN_1662557	0005270682	A	2598	CCAGTCACACAACGAAAACCAGAAAGGCGGATGAAACCAACACCACCAGC	X	-	135301760-135301809	Xq26.3b	Homo sapiens MAP7 domain containing 3 (MAP7D3), mRNA.				RP11-535K18.3; FLJ12649; FLJ12401	
Homo sapiens	RefSeq	NM_153347.1	ILMN_5890	TMEM86A	NM_153347.1	NM_153347.1		144110	23503274	NM_153347.1	TMEM86A	NP_699178.1	ILMN_1797021	0006350561	S	3431	GACCCTGGGACCCTTAATCTTGGGTTGGCAGAGTGTGAAGGGGCAAGAGC	11	+	18682757-18682806	11p15.1c	Homo sapiens transmembrane protein 86A (TMEM86A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ90119	FLJ90119
Homo sapiens	RefSeq	NM_018654.1	ILMN_9905	GPRC5D	NM_018654.1	NM_018654.1		55507	8923704	NM_018654.1	GPRC5D	NP_061124.1	ILMN_1781145	0005550019	S	830	GCAATGCCTGCCCCGTCACAGCCTACCAACACAGCTTCCAAGTGGAGAAC	12	-	13102439-13102488	12p13.1b	Homo sapiens G protein-coupled receptor, family C, group 5, member D (GPRC5D), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11311935] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with the sevenless (sev) protein, a receptor tyrosine kinase [goid 5118] [evidence IEA]	MGC129713; MGC129714	MGC129713; MGC129714
Homo sapiens	RefSeq	NM_003054.2	ILMN_8070	SLC18A2	NM_003054.2	NM_003054.2		6571	42476324	NM_003054.2	SLC18A2	NP_003045.2	ILMN_2070003	0007160131	S	1271	GGCACGTGTCCGTCTATGGGAGTGTGTACGCCATTGCGGATGTGGCATTT	10	+	119019625-119019674	10q25.3b	Homo sapiens solute carrier family 18 (vesicular monoamine), member 2 (SLC18A2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8095030] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8095030] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), into, out of, within or between cells [goid 15844] [pmid 8095030] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of monoamines, organic compounds that contain one amino group that is connected to an aromatic ring by an ethylene group (-CH2-CH2-), from one side of the membrane to the other [goid 8504] [pmid 8095030] [evidence TAS]	VAT2; MGC120477; SVAT; MGC26538; SVMT; VMAT2; MGC120478	VAT2; MGC120477; SVAT; MGC26538; SVMT; VMAT2; MGC120478
Homo sapiens	RefSeq	NM_020791.1	ILMN_27488	TAOK1	NM_020791.1	NM_020791.1		57551	45439369	NM_020791.1	TAOK1	NP_065842.1	ILMN_1758087	0005900435	S	4395	GCCACAGTGAACCAGGAGTCACTGAGCCAATGACTTTACCAGCTGCTGAC	17	+	24895361-24895410	17q11.2b	Homo sapiens TAO kinase 1 (TAOK1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 14517247] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 14517247] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 14517247] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [pmid 14517247] [evidence NAS]	TAO1; MAP3K16; KIAA1361; PSK2; MARKK; FLJ14314	TAO1; MAP3K16; KIAA1361; PSK2; MARKK; FLJ14314
Homo sapiens	RefSeq	NM_004146.4	ILMN_6301	NDUFB7	NM_004146.4	NM_004146.4		4713	33519471	NM_004146.4	NDUFB7	NP_004137.2	ILMN_1813604	0006290296	S	315	AAGCAGGAGCGGCACGACTGGGACTACTGCGAGCACCGCGACTATGTGAT	19	-	14677068-14677077:14677577-14677616	19p13.12c	Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa (NDUFB7), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	CI-B18; B18; MGC2480	CI-B18; B18; MGC2480
Homo sapiens	RefSeq	XM_939087.1	ILMN_164005	TTC13	NM_024525.2	NM_024525.2		79573	31377702	NM_024525.2	TTC13	NP_078801.2	ILMN_1745573	0004490014	A	2799	CTTGGAGGGAAAGCGTATGTATTAGCCGGCAGCCTGTTGGTTCCCACTTA	1	-	229109016-229109065	1q42.2a	Homo sapiens tetratricopeptide repeat domain 13 (TTC13), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ22584	
Homo sapiens	RefSeq	NM_024525.2	ILMN_164005	TTC13	NM_024525.2	NM_024525.2		79573	31377702	NM_024525.2	TTC13	NP_078801.2	ILMN_1753064	0006200215	A	3069	GGAAGAAGGTTCCTGGGCCATCAGTATGTGTTGCAGAGCTCACAGCCAGG	1	-	229108746-229108795	1q42.2a	Homo sapiens tetratricopeptide repeat domain 13 (TTC13), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ22584	FLJ22584
Homo sapiens	RefSeq	NM_024525.2	ILMN_164005	TTC13	NM_024525.2	NM_024525.2		79573	31377702	NM_024525.2	TTC13	NP_078801.2	ILMN_1668606	0006040392	I	143	CACCGAGCACTACTCGCCGCTCTCCCTGCTCAAGCAGGAGCTGCAGCACC	1	-	229181015-229181064	1q42.2a	Homo sapiens tetratricopeptide repeat domain 13 (TTC13), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ22584	FLJ22584
Homo sapiens	RefSeq	NM_004905.2	ILMN_1676	PRDX6	NM_004905.2	NM_004905.2		9588	28559000	NM_004905.2	PRDX6	NP_004896.1	ILMN_1803180	0007550343	S	1438	TGGCTCCCAAGGAGGTGTAGCAGGTGTGAGCAATATTAGTGCCATGTGCC	1	+	171724337-171724386	1q25.1a	Homo sapiens peroxiredoxin 6 (PRDX6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9497358] [evidence NAS]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 10893423] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 9395] [pmid 10893423] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a carboxylate [goid 4623] [pmid 10893423] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH [goid 51920] [evidence IEA]	p29; MGC46173; PRX; AOP2; aiPLA2; 1-Cys; KIAA0106; NSGPx	p29; MGC46173; PRX; AOP2; aiPLA2; 1-Cys; KIAA0106; NSGPx
Homo sapiens	RefSeq	XM_497238.1	ILMN_29947	LOC338586	XM_497238.1	XM_497238.1		338586	51468525	XM_497238.1	LOC338586	XP_497238.1	ILMN_1655421	0003060338	S	281	TGCAGGAGGTGGATGAGGTCCCAGAGAACCTACCACTGCAGGAAGTGGAT	10	+	80936490-80936539	10q22.3e	PREDICTED: Homo sapiens similar to hydroxysteroid dehydrogenase like 2 (LOC338586), mRNA.					
Homo sapiens	RefSeq	NM_022731.2	ILMN_17108	NUCKS1	NM_022731.2	NM_022731.2		64710	56118309	NM_022731.2	NUCKS1	NP_073568.2	ILMN_1680692	0004390564	S	889	GGGTCTGAAGATGAAGCCCCTTCTGGGGAGGATTAAAAGTGATGATGGTC	1	-	203954016-203954030:203954031-203954065	1q32.1g	Homo sapiens nuclear casein kinase and cyclin-dependent kinase substrate 1 (NUCKS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			NUCKS; FLJ21480; JC7	NUCKS; FLJ21480; JC7
Homo sapiens	RefSeq	XM_071013.6	ILMN_165702	LOC138652	XM_071013.7	XM_071013.7		138652	113420841	XM_071013.7	LOC138652	XP_071013.7	ILMN_1727489	0005820731	A	1332	CCGGCATCCTGCCTACCCCAGCATCTTCACCAGGGTCACCTACTTCATCA	9	-	93979447-93979496	9q22.31a	PREDICTED: Homo sapiens similar to testicular serine protease 2 (LOC138652), mRNA.					
Homo sapiens	RefSeq	XM_001726845.1	ILMN_349161	LOC100128562	XM_001726845.1	XM_001726845.1		100128562	169208112	XM_001726845.1	LOC100128562	XP_001726897.1	ILMN_3269369	0002710398	M	299	CGATCCTCCTGCCTTGGCCTCCAAAGTGTTGGGATTATGGGTGTGAGCCC	15	-	73623659-73623708	15q24.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128562 (LOC100128562), mRNA.					
Homo sapiens	RefSeq	NM_145759.2	ILMN_9684	TRAF5	NM_145759.2	NM_145759.2		7188	77404346	NM_145759.2	TRAF5	NP_665702.1	ILMN_1699447	0004830324	I	1	AGTGCAGGGATGTGCAGATGAGTGGGCTGTGGGGTGTCCTGCTCACGGTT	1	+	209586329-209586378	1q32.3a	Homo sapiens TNF receptor-associated factor 5 (TRAF5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9511754] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9153189] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10809768] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10075662] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC:39780; RNF84	MGC:39780; RNF84
Homo sapiens	RefSeq	NM_178519.2	ILMN_17830	C17ORF55	NM_178519.2	NM_178519.2		284185	31341837	NM_178519.2	C17orf55	NP_848614.1	ILMN_1656069	0004900411	S	2738	GAACAGCTTGAAGCCCCCTGCAAAGTCTGTCCCTCCTCCTGGAGCCTCAG	17	-	79276806-79276855	17q25.3f	Homo sapiens chromosome 17 open reading frame 55 (C17orf55), mRNA.				MGC120556; FLJ39421; MGC120553	MGC120556; FLJ39421; MGC120553
Homo sapiens	RefSeq	NM_003969.2	ILMN_20574	UBE2M	NM_003969.3	NM_003969.3		9040	150417997	NM_003969.3	UBE2M	NP_003960.1	ILMN_1701331	0006180619	S	1466	CAACCCACCCCTCCACCTCTGGAGGTCCCACCAGGCTATTAAAGGGGAAT	19	-	63758899-63758948	19q13.43c	Homo sapiens ubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast) (UBE2M), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9694792] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 15694336] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15361859] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA];  [goid 18169] [pmid 15361859] [evidence IDA]	hUbc12; UBC12; UBC-RS2	hUbc12; UBC12; UBC-RS2
Homo sapiens	RefSeq	XM_933966.1	ILMN_41006	LOC653434	XM_933966.1	XM_933966.1		653434	89025222	XM_933966.1	LOC653434	XP_939059.1	ILMN_1718890	0001010021	I	391	CGCAGCCACAATCCTGAGACTTCCCCCCGGGAGGCACACTTCTCCTCGCT	7	-	76523925-76523974		PREDICTED: Homo sapiens similar to similar to Williams Beuren syndrome chromosome region 19, transcript variant 3 (LOC653434), mRNA.					
Homo sapiens	RefSeq	XM_928399.1	ILMN_41077	LOC347119	XM_928399.1	XM_928399.1		347119	89029853	XM_928399.1	LOC347119	XP_933492.1	ILMN_1747474	0003390431	A	1290	CCCTGATGGGCAGCAGTGGAAAGCCTCTCTCCTCAATGGTTTTCTGAGAC	9	+	81670217-81670266	9q21.31b	PREDICTED: Homo sapiens hypothetical LOC347119 (LOC347119), mRNA.					
Homo sapiens	RefSeq	NM_001265.2	ILMN_17243	CDX2	NM_001265.2	NM_001265.2		1045	24431948	NM_001265.2	CDX2	NP_001256.1	ILMN_1671058	0002030397	S	1848	GCCAGAGCCAACCTGGACTTCCTGTCATTTTCACAATCTTGGGGCTGATG	13	-	27434470-27434519	13q12.2b	Homo sapiens caudal type homeobox 2 (CDX2), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9459001] [evidence TAS]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9459001] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	CDX3; CDX-3	CDX3; CDX-3
Homo sapiens	RefSeq	NM_015153.1	ILMN_23658	PHF3	NM_015153.1	NM_015153.1		23469	7662017	NM_015153.1	PHF3	NP_055968.1	ILMN_1798164	0006400048	S	6300	GTGCTCTGTACCAGTGCTCATCATCCCTTCTTCATACCAACGGTCCCTAG	6	+	64481717-64481766	6q12a-q12b	Homo sapiens PHD finger protein 3 (PHF3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 11856869] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC142212; MGC142210; KIAA0244	MGC142212; MGC142210; KIAA0244
Homo sapiens	RefSeq	NM_015153.1	ILMN_23658	PHF3	NM_015153.1	NM_015153.1		23469	7662017	NM_015153.1	PHF3	NP_055968.1	ILMN_2057826	0004280608	S	6650	TGACCAAGAATCAGAAGCCCAAGGGGTACATTTATTGCTTTAATCTGCAC	6	+	64482067-64482116	6q12a-q12b	Homo sapiens PHD finger protein 3 (PHF3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 11856869] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC142212; MGC142210; KIAA0244	MGC142212; MGC142210; KIAA0244
Homo sapiens	RefSeq	NM_006965.1	ILMN_26605	ZNF24	NM_006965.1	NM_006965.1		7572	5902161	NM_006965.1	ZNF24	NP_008896.1	ILMN_1654357	0007380553	S	2410	CTCTTCCCCTTGTCTGAGCATTCCTCAGGGGAGGTCACCTGTGAGGTTCC	18	-	31170008-31170057	18q12.2a	Homo sapiens zinc finger protein 24 (ZNF24), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10585455] [evidence IC ]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 10585455] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10585455] [evidence NAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 10585455] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KOX17; ZSCAN3; RSG-A; ZNF191; Zfp191	KOX17; ZSCAN3; RSG-A; ZNF191; Zfp191
Homo sapiens	RefSeq	XM_926224.3	ILMN_31816	ZNF487	XM_926224.3	XM_926224.3		642819	169190412	XM_926224.3	ZNF487	XP_931317.3	ILMN_3222384	0004230300	A	633	TGCCAGAGGGAAACCTTTGGAATATGATGGAAATGGGAAAGCCGTCTCTC	10	+	43297190-43297239	10q11.21b	PREDICTED: Homo sapiens zinc finger protein 487 (ZNF487), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	Unigene	Hs.544017	ILMN_107505	HS.544017	Hs.544017		Hs.544017		2883732	AA814136			ILMN_1892306	0006560408	S	146	AGGACAGAGGCAGAACCTGGGGGCCTGGAGACAAGGCAGAGATACAGGAT	5	+	90637646-90637695		ob25c03.s1 NCI_CGAP_Kid5 Homo sapiens cDNA clone IMAGE:1324708 3, mRNA sequence					
Homo sapiens	RefSeq	XM_931998.1	ILMN_42959	LOC644098	XM_931998.1	XM_931998.1		644098	89031202	XM_931998.1	LOC644098	XP_937091.1	ILMN_1759211	0000240129	S	1	ATGAGGTTGGGTAACCGGAAGCCAGGCGGGAAGGCGCAGCGAGCGGTCCG	10	-	49534519-49534568	10q11.22d	PREDICTED: Homo sapiens hypothetical LOC644098 (LOC644098), mRNA.					
Homo sapiens	RefSeq	XR_017759.2	ILMN_177922	C17ORF88	XR_017759.2	XR_017759.2		23591	169211831	XR_017759.2	C17orf88		ILMN_3194613	0000730176	A	233	TTGGGCGGTTCCGCGGTCCCTGTGCGCTTCCACCTTCACCCAGAAGGACT				17q21.31b	PREDICTED: Homo sapiens misc_RNA (C17orf88), miscRNA.					
Homo sapiens	RefSeq	NM_173568.2	ILMN_23770	UMODL1	NM_001004416.2	NM_001004416.2		89766	145580583	NM_001004416.2	UMODL1	NP_001004416.2	ILMN_1769316	0007650064	A	4350	CCTGGGCTTGCCCTCCCTTGGCGTCCGTCACCCTTTGGCAAATATAGAAT	21	+	42435646-42435695	21q22.3b	Homo sapiens uromodulin-like 1 (UMODL1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Stops, prevents or reduces the activity of a protease, any enzyme catalyzes the hydrolysis peptide bonds [goid 30414] [evidence IEA]		
Homo sapiens	RefSeq	XM_001717717.1	ILMN_333786	LOC100128640	XM_001717717.1	XM_001717717.1		100128640	169165466	XM_001717717.1	LOC100128640	XP_001717769.1	ILMN_3251776	0005870689	M	1457	GGGAGGTGGCACCTGGAGGTCTCAGTCATTTCACTTCTCTGAGCCTCAGT				3p22.2a	PREDICTED: Homo sapiens hypothetical protein LOC100128640 (LOC100128640), mRNA.					
Homo sapiens	RefSeq	NM_005496.3	ILMN_164374	SMC4	NM_005496.3	NM_005496.3		10051	50658064	NM_005496.3	SMC4	NP_005487.3	ILMN_1683302	0001400735	I	112	TTTCGATGGCTCCCTTCCCGAAGTCCCGCTGCCTCTAAGCGGAGTGTTAA	3	+	160118458-160118507	3q26.1a	Homo sapiens structural maintenance of chromosomes 4 (SMC4), transcript variant 1, mRNA.	A multisubunit protein complex that plays a central role in chromosome condensation [goid 796] [pmid 11850403] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11850403] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [pmid 11136719] [evidence IDA]; A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11136719] [evidence TAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9789013] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SMC4L1; CAPC; hCAP-C	SMC4L1; CAPC; hCAP-C
Homo sapiens	RefSeq	NM_032091.1	ILMN_23633	PCDHGA11	NM_032091.1	NM_032091.1		56105	14196450	NM_032091.1	PCDHGA11	NP_114480.1	ILMN_1671403	0001430324	I	3065	TTCCATTTCAATTTTGCTGTGCCTTCACTGATTTGTAGTTATATTCCACC	5	+	140783785-140783834	5q31.3c	Homo sapiens protocadherin gamma subfamily A, 11 (PCDHGA11), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-A11	PCDH-GAMMA-A11
Homo sapiens	RefSeq	NM_032091.1	ILMN_23633	PCDHGA11	NM_032091.1	NM_032091.1		56105	14196450	NM_032091.1	PCDHGA11	NP_114480.1	ILMN_2386379	0004050750	A	1577	GGCTGAATGTGGCAGATGACAACGATAACCCTCCCGTTTTTCCTCACTCC	5	+	140782297-140782346	5q31.3c	Homo sapiens protocadherin gamma subfamily A, 11 (PCDHGA11), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-A11	PCDH-GAMMA-A11
Homo sapiens	RefSeq	XM_211837.2	ILMN_36532	LOC285307	XM_211837.2	XM_211837.2		285307	88961676	XM_211837.2	LOC285307	XP_211837.1	ILMN_1750482	0001990687	A	457	CAGTGATGGTCTAGGCCAGGTCACAGTGTTTGGACACCGCATGAACATGC	3	+	34403555-34403573:34425757-34425787		PREDICTED: Homo sapiens hypothetical LOC285307 (LOC285307), mRNA.					
Homo sapiens	RefSeq	NM_005158.2	ILMN_1881	ABL2	NM_005158.3	NM_005158.3		27	153266756	NM_005158.3	ABL2	NP_005149.3	ILMN_1657870	0002510520	I	91	CACTTTGCTGCCTGTGCACTGAGGCCTCAGAATCTGCTCTACCCGACTTA	1	-	179112071-179112120	1q25.2c	Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) (ABL2), transcript variant a, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 2198571] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2198571] [evidence TAS]; The posttranslational phosphorylation of peptidyl-tyrosine to form peptidyl-O4'-phospho-L-tyrosine [goid 18108] [pmid 15886098] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered [goid 51353] [pmid 12893824] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 15886098] [evidence IDA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15886098] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [pmid 15886098] [evidence IDA]; Modulates the activity of any of the phosphoinositide 3-kinases (PI3Ks). Regulatory subunits can link a PI3K catalytic subunit to upstream signaling events and help position the catalytic subunits close to their lipid substrates [goid 35014] [evidence IEA]	FLJ31718; ABLL; ARG; FLJ22224; FLJ41441	ABLL; ARG
Homo sapiens	RefSeq	NM_012202.1	ILMN_7558	GNG3	NM_012202.1	NM_012202.1		2785	6912393	NM_012202.1	GNG3	NP_036334.1	ILMN_1806147	0000450632	S	770	CTCGGTGACCTGCTCAGACAATGGAGAGGGATGGGCCAGGTTCTTGCTCT	11	+	62233137-62233186	11q12.3a	Homo sapiens guanine nucleotide binding protein (G protein), gamma 3 (GNG3), mRNA.	Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 10075696] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10075696] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]		
Homo sapiens	RefSeq	XM_932576.1	ILMN_44078	LOC644999	XM_932576.1	XM_932576.1		644999	89034096	XM_932576.1	LOC644999	XP_937669.1	ILMN_1723881	0003420170	S	61	CGCATCGCGGGGGGCGCCTCGCCCCCCTGCGATTTGGATCGTAATATCCG	11	+	67256082-67256131		PREDICTED: Homo sapiens hypothetical protein LOC644999 (LOC644999), mRNA.					
Homo sapiens	RefSeq	NM_001082.3	ILMN_18195	CYP4F2	NM_001082.3	NM_001082.3		8529	13435390	NM_001082.3	CYP4F2	NP_001073.3	ILMN_1729439	0001440719	S	1221	CTGCATCCCCCAGTCCCGGTCATCTCCCGCCATGTCACCCAGGACATTGT	19	-	15990602-15990651	19p13.12a	Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 2 (CYP4F2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [pmid 8026587] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [pmid 8026587] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate + NADPH + H2O = (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-trihydroxyicosa-6,8,10,14-tetraenoate + NADP+ + H2O [goid 50051] [evidence IEA]	CPF2	CPF2
Homo sapiens	RefSeq	NM_001082.3	ILMN_18195	CYP4F2	NM_001082.3	NM_001082.3		8529	13435390	NM_001082.3	CYP4F2	NP_001073.3	ILMN_2178492	0006650273	S	2121	CCCGGGATGGTGAAAATGTTCCGGACCTAGATACTGACGAAGGTAGCACG	19	-	15989023-15989072	19p13.12a	Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 2 (CYP4F2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [pmid 8026587] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [pmid 8026587] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate + NADPH + H2O = (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-trihydroxyicosa-6,8,10,14-tetraenoate + NADP+ + H2O [goid 50051] [evidence IEA]	CPF2	CPF2
Homo sapiens	RefSeq	XM_942117.1	ILMN_37758	LOC652595	XM_942117.1	XM_942117.1		652595	89063184	XM_942117.1	LOC652595	XP_947210.1	ILMN_1702783	0000730689	S	1	ATGCCGTATAGGCTCGTGGAACTGGGTGATCTGGACCCTCTGGCATCTCT					PREDICTED: Homo sapiens similar to U2 small nuclear ribonucleoprotein A (U2 snRNP-A) (LOC652595), mRNA.					
Homo sapiens	RefSeq	NM_021614.2	ILMN_165586	KCNN2	NM_021614.2	NM_021614.2		3781	25777644	NM_021614.2	KCNN2	NP_067627.2	ILMN_1749996	0000610538	I	1157	ACATTCACATGGACGGCCCGGCTTGCCTTCTCCTATGCCCCATCCACAAC	5	+	113726032-113726081	5q22.3a	Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10991935] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10991935] [evidence NAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 16286] [pmid 10991935] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	KCa2.2; SKCA2; SK2; hSK2	KCa2.2; SK2; hSK2; SKCA2
Homo sapiens	RefSeq	NM_170775.1	ILMN_165586	KCNN2	NM_021614.2	NM_021614.2		3781	25777644	NM_021614.2	KCNN2	NP_067627.2	ILMN_1685636	0005360685	A	2086	GATGGAGAGCTACGACAAGCACGTCACTTACAATGCTGAGCGGTCCCGGT	5	+	113740142-113740191	5q22.3a	Homo sapiens potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (KCNN2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10991935] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10991935] [evidence NAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the transmembrane transfer of potassium by a channel with a unit conductance of 2 to 20 picoSiemens that opens in response to stimulus by internal calcium ions. Small conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism [goid 16286] [pmid 10991935] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [evidence IEA]	KCa2.2; SKCA2; SK2; hSK2	KCa2.2; SK2; hSK2; SKCA2
Homo sapiens	RefSeq	NM_021176.2	ILMN_1509	G6PC2	NM_021176.2	NM_021176.2		57818	126273544	NM_021176.2	G6PC2	NP_066999.1	ILMN_2394421	0002070070	A	2503	CCAGAGAAATCAGGTGCCTTCCTCAAGGTCATGCTCCAACCCAGGCCAAC	2	+	169474178-169474227	2q24.3f	Homo sapiens glucose-6-phosphatase, catalytic, 2 (G6PC2), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC141936; IGRP	IGRP
Homo sapiens	RefSeq	NM_021176.1	ILMN_1509	G6PC2	NM_021176.2	NM_021176.2		57818	126273544	NM_021176.2	G6PC2	NP_066999.1	ILMN_1661703	0005050139	S	661	CAGAGGCCTTTGAACACACTCCAGGCATCCAAACGGCCAGTCTGGGCACA	2	+	169472336-169472385	2q24.3f	Homo sapiens glucose-6-phosphatase, catalytic, 2 (G6PC2), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC141936; IGRP	IGRP
Homo sapiens	RefSeq	NM_021176.2	ILMN_1509	G6PC2	NM_021176.2	NM_021176.2		57818	126273544	NM_021176.2	G6PC2	NP_066999.1	ILMN_2287257	0002640035	I	578	CAGTGTCTGCATCTCCAGAGTATTCATAGCAACACATTTTCCTCATCAAG	2	+	169471465-169471514	2q24.3f	Homo sapiens glucose-6-phosphatase, catalytic, 2 (G6PC2), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]	Catalysis of the reaction: D-glucose 6-phosphate + H2O = D-glucose + phosphate [goid 4346] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC141936; IGRP	IGRP
Homo sapiens	RefSeq	NM_013253.4	ILMN_4127	DKK3	NM_013253.4	NM_013253.4		27122	66346687	NM_013253.4	DKK3	NP_037385.2	ILMN_2289381	0005270408	I	149	CGGGAGCGAGCAGATCCAGTCCGGCCCGCAGCGCAACTCGGTCCAGTCGG	11	-	12030719-12030768	11p15.3b	Homo sapiens dickkopf homolog 3 (Xenopus laevis) (DKK3), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10570958] [evidence TAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10570958] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]		REIC	REIC
Homo sapiens	RefSeq	NM_013253.4	ILMN_4127	DKK3	NM_013253.4	NM_013253.4		27122	66346687	NM_013253.4	DKK3	NP_037385.2	ILMN_2398159	0005390451	A	2467	CTCCACAAATGATGTTTTCAGGTGTCATGGACTGTTGCCACCATGTATTC	11	-	11985210-11985259	11p15.3b	Homo sapiens dickkopf homolog 3 (Xenopus laevis) (DKK3), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10570958] [evidence TAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10570958] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]		REIC	REIC
Homo sapiens	RefSeq	NM_138423.2	ILMN_15514	CASC4	NM_138423.2	NM_138423.2		113201	29826288	NM_138423.2	CASC4	NP_612432.2	ILMN_1686948	0000060241	I	1443	GATGATGGTAACGTAGGTGAGTATGAGGCAGACAAGCAGGCTGAGCTGGC	15	+	42482448-42482497	15q15.3c	Homo sapiens cancer susceptibility candidate 4 (CASC4), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC74708; H63; DKFZp459F1927	MGC74708; H63; DKFZp459F1927
Homo sapiens	RefSeq	NM_020834.1	ILMN_24518	HOMEZ	NM_020834.1	NM_020834.1		57594	29789117	NM_020834.1	HOMEZ	NP_065885.1	ILMN_1765550	0001980554	S	3573	GAGTACCAGAAAGGGTATGGGGATCCTAGTTCAGATACAAGATCATTCCC	14	-	22812726-22812775	14q11.2f	Homo sapiens homeobox and leucine zipper encoding (HOMEZ), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOMEZ; KIAA1443	HOMEZ; KIAA1443
Homo sapiens	RefSeq	XM_001131954.2	ILMN_178020	LOC732134	XM_001131954.2	XM_001131954.2		732134	169217977	XM_001131954.2	LOC732134	XP_001131954.2	ILMN_3235044	0001430471	S	4	CAAAAAGAAATGGAACACGATGTGAAGAGATTTGGCCAGGCTGCCTGGGC					PREDICTED: Homo sapiens similar to WHDC1L1 protein (LOC732134), mRNA.					
Homo sapiens	RefSeq	NM_001134233.1	ILMN_365573	C1ORF204	NM_001134233.1	NM_001134233.1		284677	197116395	NM_001134233.1	C1orf204	NP_001127705.1	ILMN_3244105	0003390025	S	2295	GCTGTGGGAGGAATGGGGGATTTGGGAGGTGATGGCTAAGGGGTTATGGG	1	-	159804420-159804469		Homo sapiens chromosome 1 open reading frame 204 (C1orf204), mRNA.					
Homo sapiens	RefSeq	NM_017872.2	ILMN_137789	ICF45	NM_017872.2	NM_017872.2		54974	21361662	NM_017872.2	ICF45	NP_060342.1	ILMN_1792620	0001780064	S	1863	CTTGGCCTCTGAAGGGGGAAGGTAGTGGGAATAGGTGGTGAGAGAACTCA	5	+	157100090-157100139	5q33.3b	Homo sapiens interphase cyctoplasmic foci protein 45 (ICF45), mRNA.				FLJ20546	FLJ20546
Homo sapiens	RefSeq	XM_937187.1	ILMN_45150	LOC647542	XM_937187.1	XM_937187.1		647542	89038823	XM_937187.1	LOC647542	XP_942280.1	ILMN_1666464	0001780414	S	274	GCAGGGCAGCACTGGTCCCACTCCCTCAGGTGGTGTCACTCCTCACCCGA					PREDICTED: Homo sapiens hypothetical protein LOC647542 (LOC647542), mRNA.					
Homo sapiens	RefSeq	XM_927098.1	ILMN_32116	FAM87B	XM_927098.1	XM_927098.1		400728	88942298	XM_927098.1	FAM87B	XP_932191.1	ILMN_1754841	0001050156	S	1607	AGCAAACCACCGCTGAAAGGCAACGTTATTTCTGTTGGCAGAAGGCGGCC	1	+	744746-744795	8p23.3b	PREDICTED: Homo sapiens family with sequence similarity 87, member B (FAM87B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_178428.3	ILMN_163684	LCE2A	NM_178428.3	NM_178428.3		353139	57242769	NM_178428.3	LCE2A	NP_848515.1	ILMN_1653282	0002510379	S	480	CACCTTGTGAGGTGTTTTGTCTGTTGTCATGGCCCAAGAGCCCATCCTGG	1	+	150938430-150938479	1q21.3b	Homo sapiens late cornified envelope 2A (LCE2A), mRNA.		The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		LEP9	LEP9
Homo sapiens	RefSeq	NM_203416.1	ILMN_17347	CD163	NM_203416.1	NM_203416.1		9332	44889962	NM_203416.1	CD163	NP_981961.1	ILMN_2379599	0002680092	A	3315	CAGAGACAGCGGCTTGCAGTTTCCTCAAGAGGAGAGAACTTAGTCCACCA	12	-	7525088-7525119:7526506-7526523	12p13.31c	Homo sapiens CD163 molecule (CD163), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8370408] [evidence TAS]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]	Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [pmid 8370408] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15479433] [evidence IPI]	MM130; M130	MM130; M130
Homo sapiens	RefSeq	NM_004871.2	ILMN_8012	GOSR1	NM_004871.2	NM_004871.2		9527	55774986	NM_004871.2	GOSR1	NP_004862.1	ILMN_1798816	0000270019	A	4321	GACCCAGGGCCACATGTAGACAGCTAGGCCAGTGCTTTTTCCTCTTAGGG	17	+	25877064-25877113	17q11.2c	Homo sapiens golgi SNAP receptor complex member 1 (GOSR1), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15215310] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25 [goid 31201] [pmid 15215310] [evidence TAS]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 8636227] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [pmid 15215310] [evidence IDA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [pmid 15215310] [evidence IDA]	GOS-28; GOS28; GOLIM2; P28; GOS28/P28; GS28	GOS-28; GOS28; GOLIM2; P28; GOS28/P28; GS28
Homo sapiens	RefSeq	XM_945931.1	ILMN_41018	LOC650874	XM_945931.1	XM_945931.1		650874	89034980	XM_945931.1	LOC650874	XP_951024.1	ILMN_1689188	0003360379	I	242	GTCCCACTCCTACCTTATCAGATACTTTCAGTTATTTCTACTTTTCCTCT					PREDICTED: Homo sapiens similar to ribosomal protein L31, transcript variant 2 (LOC650874), mRNA.					
Homo sapiens	RefSeq	NM_080681.1	ILMN_19749	COL11A2	NM_080681.1	NM_080681.1		1302	18201918	NM_080681.1	COL11A2	NP_542412.1	ILMN_1721178	0003180471	A	5992	ACTGAGTATGTTCATTGCCACCCCTGTCCTCCCCTGGGCACCCCTCACTT	6	-	33238572-33238621	6p21.32a	Homo sapiens collagen, type XI, alpha 2 (COL11A2), transcript variant 2, mRNA.	Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]; A collagen heterotrimer containing type XI alpha chains in alpha1(XI)alpha2(XI)alpha3(XI) trimers; type XI collagen triple helices associate to form fibrils [goid 5592] [pmid 7859284] [evidence NAS]; A collagen heterotrimer containing type XI alpha chains in alpha1(XI)alpha2(XI)alpha3(XI) trimers; type XI collagen triple helices associate to form fibrils [goid 5592] [pmid 8838804] [evidence NAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 7859284] [evidence NAS]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 8838804] [evidence NAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence NAS]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; A constituent of the extracellular matrix that enables the matrix to resist longitudinal stress [goid 30020] [pmid 8838804] [evidence NAS]; A constituent of the extracellular matrix that enables the matrix to resist longitudinal stress [goid 30020] [pmid 7859284] [evidence NAS]	PARP; STL3; HKE5; DFNB53; DFNA13	PARP; STL3; HKE5; DFNB53; DFNA13
Homo sapiens	RefSeq	NM_023945.2	ILMN_12957	MS4A5	NM_023945.2	NM_023945.2		64232	23110996	NM_023945.2	MS4A5	NP_076434.2	ILMN_1752169	0003850497	S	457	GTGCCCTGGGAGCAATAGCTGGAATCATTCTCCTCACATTTGGTTTCATC	11	+	59957845-59957894	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 5 (MS4A5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	TETM4; MGC34184; CD20L2; CD20-L2	TETM4; MGC34184; CD20L2; CD20-L2
Homo sapiens	RefSeq	NM_005329.2	ILMN_9851	HAS3	NM_005329.2	NM_005329.2		3038	20302152	NM_005329.2	HAS3	NP_005320.2	ILMN_1794501	0006980612	I	3971	GCAGCAAAACCAAACTGGGTCTTCAGCTTTATCCCCGTTTCTTGCAAGGG	16	+	67708823-67708872	16q22.1d	Homo sapiens hyaluronan synthase 3 (HAS3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9169154] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9169154] [evidence TAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)](n) + 2n UDP [goid 50501] [evidence IEA]		
Homo sapiens	RefSeq	NM_005329.2	ILMN_9851	HAS3	NM_005329.2	NM_005329.2		3038	20302152	NM_005329.2	HAS3	NP_005320.2	ILMN_1668760	0000380504	A	757	TTCAAGGCCCTCGGCGATTCGGTGGACTACATCCAGGTGTGCGACTCTGA	16	+	67701400-67701435:67704845-67704858	16q22.1d	Homo sapiens hyaluronan synthase 3 (HAS3), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9169154] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9169154] [evidence TAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl(1,4)beta-D-glucuronosyl(1,3)](n) + 2n UDP [goid 50501] [evidence IEA]		
Homo sapiens	RefSeq	NM_001128636.1	ILMN_366422	ELFN1	NM_001128636.1	NM_001128636.1		392617	191252815	NM_001128636.1	ELFN1	NP_001122108.1	ILMN_3247713	0007100612	S	3023	TTTAAAAAGACATAAAATGCCATCCGTGGGGGGTGTGGCCGGCGTGGCCA				7p22.3a	Homo sapiens extracellular leucine-rich repeat and fibronectin type III domain containing 1 (ELFN1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_001011663.1	ILMN_17815	PCGF6	NM_001011663.1	NM_001011663.1		84108	58761529	NM_001011663.1	PCGF6	NP_001011663.1	ILMN_1810181	0006520014	I	718	GAGGTCTAGAAGTACCTAAACCTGCTGTTCCACAGCCAGTCCCTTCAAGC	10	-	105104863-105104889:105106995-105107017	10q24.33a	Homo sapiens polycomb group ring finger 6 (PCGF6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [pmid 8521824] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 8521824] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8521824] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MBLR; MGC15678; MGC17541; RNF134	MBLR; MGC15678; MGC17541; RNF134
Homo sapiens	RefSeq	NM_017491.3	ILMN_14401	WDR1	NM_005112.4	NM_005112.4		9948	53729351	NM_005112.4	WDR1	NP_005103.2	ILMN_1780036	0007150475	A	2364	GGCACCGTGTCCAAGTTTTTAGAACCCTTGTTAGCCAGACCGAGGTGTCC	4	-	10076272-10076321	4p16.1b	Homo sapiens WD repeat domain 1 (WDR1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10036186] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	NORI-1; AIP1	NORI-1; AIP1
Homo sapiens	RefSeq	NM_199071.2	ILMN_27743	C21ORF58	NM_199071.2	NM_199071.2		54058	47080097	NM_199071.2	C21orf58	NP_951037.1	ILMN_2310295	0000070471	A	2380	TCAGATCCCCCTCTTCCATCACGGAGGTAAAGTTGAGGCCGTGGACGCCA	21	-	46545979-46546028	21q22.3f	Homo sapiens chromosome 21 open reading frame 58 (C21orf58), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_199071.2	ILMN_27743	C21ORF58	NM_199071.2	NM_199071.2		54058	47080097	NM_199071.2	C21orf58	NP_951037.1	ILMN_2310296	0002070220	A	2857	CTCTGATGGAACCACTGCACTATAGCCTGGACCACAGAGCAGGCCCCTGT	21	-	46545502-46545551	21q22.3f	Homo sapiens chromosome 21 open reading frame 58 (C21orf58), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_199071.2	ILMN_27743	C21ORF58	NM_199071.2	NM_199071.2		54058	47080097	NM_199071.2	C21orf58	NP_951037.1	ILMN_1769471	0006350563	I	1452	TTAGTCATTCCTGGAGCACACAGGGCCTTTGCGTGGAGCCACCGTCTCTG	21	-	46561631-46561678:46561679-46561680	21q22.3f	Homo sapiens chromosome 21 open reading frame 58 (C21orf58), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_152871.1	ILMN_9664	FAS	NM_152872.1	NM_152872.1		355	23510422	NM_152872.1	FAS	NP_690611.1	ILMN_1808132	0000460438	A	2297	CCCCCACCCCCGAAAATGTTCAATAATGTCCCATGTAAAACCTGCTACAA	10	+	90764613-90764662	10q23.31b	Homo sapiens Fas (TNF receptor superfamily, member 6) (FAS), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7510905] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7533181] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8681376] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7530336] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7536190] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8521815] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9721089] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10875918] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 7510905] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9360929] [evidence TAS]; Any process induced by extracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8624] [pmid 11048727] [evidence EXP]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 7533181] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 7536190] [evidence IPI]	CD95; APT1; FASTM; FAS1; APO-1; ALPS1A; TNFRSF6	CD95; FAS1; APT1; FASTM; APO-1; ALPS1A; TNFRSF6
Homo sapiens	Unigene	Hs.580496	ILMN_132677	HS.580496	Hs.580496		Hs.580496		2046526	AA393557			ILMN_1905581	0006100575	S	160	CATCTAATCCTGCCAAGGAGAGCAAACTTGCACCTCAAGACCCAGGTGCC	2	+	49141816-49141865		zt72a07.r1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:727860 5, mRNA sequence					
Homo sapiens	RefSeq	NM_032518.2	ILMN_1933	COL25A1	NM_032518.2	NM_032518.2		84570	38570072	NM_032518.2	COL25A1	NP_115907.2	ILMN_1791112	0003180035	I	2380	ACCTCTCCATCCCAGCATGTACCTTGTTTGATTCTTCTCCTGCTGTCTGC	4	-	110024802-110024827:110029826-110029849	4q25b-q25c	Homo sapiens collagen, type XXV, alpha 1 (COL25A1), transcript variant 2, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11927537] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11927537] [evidence NAS]		Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 11927537] [evidence IDA]; Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 15522881] [evidence IDA]; Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 15215182] [evidence IDA]; Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [pmid 15615705] [evidence IDA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 15522881] [evidence IDA]	CLAC	CLAC
Homo sapiens	RefSeq	NR_000008.1	ILMN_790	SNORD22	NR_000008.1	NR_000008.1		9304	22546012	NR_000008.1	SNORD22		ILMN_1724884	0004260431	S	45	CCAGAGCCTGTAAAGGTGAACCACTGGGACTGGCTGGGGGAGAAGAGGAA	11	-	62620413-62620462	11q12.3b	Homo sapiens small nucleolar RNA, C/D box 22 (SNORD22), small nucleolar RNA.				RNU22; U22	RNU22; U22
Homo sapiens	RefSeq	NM_001013716.1	ILMN_19369	LOC441087	NM_001013716.1	NM_001013716.1		441087	61966880	NM_001013716.1	LOC441087	NP_001013738.1	ILMN_1742163	0007100307	S	820	TTGGTTTGAAAATACTTGGAGAGGCCGGGTGTGGTGGCTCACGCCTGTGG	5	+	75064202-75064251	5q13.3c	Homo sapiens hypothetical gene supported by AK125735 (LOC441087), mRNA.					
Homo sapiens	RefSeq	NM_007147.2	ILMN_10240	ZNF175	NM_007147.2	NM_007147.2		7728	37594438	NM_007147.2	ZNF175	NP_009078.1	ILMN_1675788	0006940458	S	3687	ACACCAGGAGTCAACAAACTGTGGCCATTGGCCAAATATGGCCTCCCAAC	19	+	52092893-52092942	19q13.33d	Homo sapiens zinc finger protein 175 (ZNF175), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8838321] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	OTK18	OTK18
Homo sapiens	RefSeq	XM_936909.1	ILMN_30646	LOC653934	XM_936909.1	XM_936909.1		653934	88987963	XM_936909.1	LOC653934	XP_942002.1	ILMN_1745274	0005260678	S	3	GCTAAAGGGGAGCCCTTGGCTTGATAATAAGCATACAGTATTTGGACGAG					PREDICTED: Homo sapiens similar to peptidylprolyl isomerase domain and WD repeat containing 1 (LOC653934), mRNA.					
Homo sapiens	Unigene	Hs.570833	ILMN_123014	HS.570833	Hs.570833		Hs.570833		27845237	BX102319			ILMN_1834721	0006590382	S	420	GGGTACAGGGACAAGAGTGGAGTTGGAAAACGTCAGTCACCCTAATAAAC	4	+	82334455-82334504		BX102319 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp998F064125, mRNA sequence					
Homo sapiens	RefSeq	NM_153283.1	ILMN_11539	HYAL1	NM_153283.1	NM_153283.1		3373	24497567	NM_153283.1	HYAL1	NP_695015.1	ILMN_2314417	0001980300	A	1201	CCACTGTCACAGGCATATTCCCTGCACACACATGCATACTTACAGACTGG	3	-	50337746-50337795	3p21.31b	Homo sapiens hyaluronoglucosaminidase 1 (HYAL1), transcript variant 3, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9223416] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the random hydrolysis of 1,4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate [goid 4415] [pmid 9223416] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	LUCA1; HYAL-1; MGC45987; NAT6	LUCA1; HYAL-1; MGC45987; NAT6
Homo sapiens	RefSeq	XM_001714087.1	ILMN_335278	LOC100132209	XM_001714087.1	XM_001714087.1		100132209	169189861	XM_001714087.1	LOC100132209	XP_001714139.1	ILMN_3235932	0006100528	S	266	AGGACCAGAAGAAACACAGAAAGAAAAACGGTGGACCCAAAGCTGCAAAG	10	+	47807459-47807508	10q11.22b	PREDICTED: Homo sapiens similar to BMS1-like, ribosome assembly protein (yeast) (LOC100132209), mRNA.					
Homo sapiens	Unigene	Hs.201950	ILMN_81734	HS.201950	Hs.201950		Hs.201950		8908312	BE220994			ILMN_1827259	0001770050	S	428	GCACACCCCTTTATCAACTCCACCAGGGGAAACTATTCCTGCCCTACCCG	14	-	59007934-59007983		hu02g11.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3165476 3, mRNA sequence					
Homo sapiens	Unigene	Hs.536451	ILMN_103084	HS.536451	Hs.536451		Hs.536451		27833652	BX105743			ILMN_1859787	0003130445	S	118	CGCGGTGGATGGCTGGATTGGCGCTTTCATCTCGGTTACTCTGTGTGTGG	17	+	39633815-39633864		BX105743 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGp998H135716, mRNA sequence					
Homo sapiens	RefSeq	NM_021638.3	ILMN_181438	AFAP1	NM_021638.4	NM_021638.4		60312	125661041	NM_021638.4	AFAP1	NP_067651.2	ILMN_1660424	0002190681	I	44	GAAGACGCCTGAATCTTTTAGTGGACCTGCTTTCAGCAAACTTGTTTTTT	4	-	7924830-7924879	4p16.1d	Homo sapiens actin filament associated protein 1 (AFAP1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	AFAP-110; AFAP	AFAP-110
Homo sapiens	RefSeq	NM_032814.1	ILMN_21714	TMEM118	NM_032814.2	NM_032814.2		84900	142364033	NM_032814.2	TMEM118	NP_116203.1	ILMN_1738093	0004860086	S	1619	AGCCATCTCCAGGGTGACGGAACCCAGTGTATTACCTGCTGGAACCAAGG				12q24.22a	Homo sapiens transmembrane protein 118 (TMEM118), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ14627	FLJ14627
Homo sapiens	RefSeq	XR_016704.2	ILMN_169321	RPL12P6	XR_016704.2	XR_016704.2		440176	169207025	XR_016704.2	RPL12P6		ILMN_3226244	0006250408	A	37	CGGCTTTCGGCTTGGAGGAGGCCAAGGTGCAACTTTCTTTGGTCATTCCG	14	-	34279807-34279856	14q13.2a	PREDICTED: Homo sapiens misc_RNA (RPL12P6), miscRNA.					
Homo sapiens	RefSeq	NM_001917.3	ILMN_18156	DAO	NM_001917.4	NM_001917.4		1610	148539836	NM_001917.4	DAO	NP_001908.3	ILMN_1737152	0006550132	S	1171	TCCAGAATGCCACCATCCCACCTCTGAAGACTCCAGTGACTGCTGCCTCC	12	+	107818414-107818440:107818441-107818463	12q24.11a	Homo sapiens D-amino-acid oxidase (DAO), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 2901986] [evidence NAS]	The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis [goid 6418] [evidence IEA]; The chemical reactions and pathways involving leucine, 2-amino-4-methylpentanoic acid [goid 6551] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: a D-amino acid + H2O + O2 = a 2-oxo acid + NH3 + H2O2 [goid 3884] [pmid 1356107] [evidence TAS]; Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of pyrophosphate and AMP [goid 4812] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DAMOX; DAAO; OXDA; MGC35381	DAMOX; DAAO; MGC35381; OXDA
Homo sapiens	RefSeq	XR_039698.1	ILMN_345167	LOC100134609	XR_039698.1	XR_039698.1		100134609	169170262	XR_039698.1	LOC100134609		ILMN_3243797	0007200053	S	3628	GTCAGCCTCTTCACACCCAGCTCTTGTCTCTAAGTGGCCTTTCCAGGAGC	7	-	56447965-56448014		PREDICTED: Homo sapiens misc_RNA (LOC100134609), miscRNA.					
Homo sapiens	RefSeq	NM_053017.2	ILMN_21989	ART5	NM_053017.2	NM_053017.2		116969	30089991	NM_053017.2	ART5	NP_443750.2	ILMN_1733583	0000050437	S	1034	GTTACCAGATTCTCTCAGGATGGAGCCCAGAGCTTGGTGACTCTCTGGAG	11	-	3617491-3617540	11p15.4d	Homo sapiens ADP-ribosyltransferase 5 (ART5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]	Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + L-arginine = nicotinamide + N2-(ADP-D-ribosyl)-L-arginine [goid 3956] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC22848	MGC22848
Homo sapiens	RefSeq	NR_003070.1	ILMN_165671	SNORD89	NR_003070.1	NR_003070.1		692205	96974953	NR_003070.1	SNORD89		ILMN_3238662	0005810411	S	24	GGCCGAATTGCAGTGTCTCCATCAGCAGTTTGCTCTCCATGGGCACACGA	2	-	101889438-101889487	2q11.2e	Homo sapiens small nucleolar RNA, C/D box 89 (SNORD89), small nucleolar RNA.				HBII-289	HBII-289
Homo sapiens	RefSeq	NM_021029.3	ILMN_137410	RPL36A	NM_021029.3	NM_021029.3		6173	38683866	NM_021029.3	RPL36A	NP_066357.1	ILMN_1781137	0005900521	S	478	CTTTTGGGAGGGAATAAGCTAGAGCCATCAATACAATTCCGCTTGTGGGG	X	+	100537461-100537510	Xq22.1c	Homo sapiens ribosomal protein L36a (RPL36A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 3542712] [evidence NAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	RPL44; MGC72020; MIG6; L44L	RPL44; MGC72020; MIG6; L44L
Homo sapiens	RefSeq	NM_198463.1	ILMN_23900	C3ORF67	NM_198463.2	NM_198463.2		200844	142359507	NM_198463.2	C3orf67	NP_940865.1	ILMN_1697761	0001770167	S	2068	CCCCCAAACAGGGAAATACTATGAGTTGGTATAATGCCTCCTTCCGGGGC	3	-	58849377-58849426	3p14.2d	Homo sapiens chromosome 3 open reading frame 67 (C3orf67), mRNA.				MGC48416; FLJ42930; FLJ42117	MGC48416; FLJ42930
Homo sapiens	Unigene	Hs.581622	ILMN_133803	HS.581622	Hs.581622		Hs.581622		80507375	DA149036			ILMN_1836910	0006250239	S	388	CAGTTAAGTAAGGGCTCCAGCTGGGTGAACTATGGGGCATTTGCCCGGAG	3	+	153849012-153849022:153850839-153850877		DA149036 BRAMY2 Homo sapiens cDNA clone BRAMY2006448 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002994.3	ILMN_165900	CXCL5	NM_002994.3	NM_002994.3		6374	41872613	NM_002994.3	CXCL5	NP_002985.1	ILMN_1752562	0000380010	S	1648	GCAAGTTCCCTCCCCACTCACAGCTTTGGCCCCTTTCACAGAGTAGAACC	4	-	75080983-75081032	4q13.3d	Homo sapiens chemokine (C-X-C motif) ligand 5 (CXCL5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10820279] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10820279] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7929219] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10463948] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10820279] [evidence TAS]	ENA-78; SCYB5	ENA-78; SCYB5
Homo sapiens	RefSeq	NM_002994.3	ILMN_165900	CXCL5	NM_002994.3	NM_002994.3		6374	41872613	NM_002994.3	CXCL5	NP_002985.1	ILMN_2171384	0000540377	S	1984	AAGAGAAAATGTGACACTTGTGAAAAGGCTTGTAGGAAAGCTCCTCCCTT	4	-	75080647-75080696	4q13.3d	Homo sapiens chemokine (C-X-C motif) ligand 5 (CXCL5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10820279] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10820279] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7929219] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 10463948] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 10820279] [evidence TAS]	ENA-78; SCYB5	ENA-78; SCYB5
Homo sapiens	RefSeq	XM_926913.1	ILMN_5932	RPS27	NM_001030.3	NM_001030.3		6232	68160923	NM_001030.3	RPS27	NP_001021.1	ILMN_1696839	0006650564	S	261	CTTACAGAAGGATGTTCCTTCAGGAGGAAGCAGCACTAAAAGCACTCTGA	1	+	152230767-152230776:152231165-152231193:152231194-152231204	1q21.3d	Homo sapiens ribosomal protein S27 (metallopanstimulin 1) (RPS27), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8407955] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8407955] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8908372] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8407955] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MPS-1; MPS1	
Homo sapiens	RefSeq	NM_001030.3	ILMN_5932	RPS27	NM_001030.3	NM_001030.3		6232	68160923	NM_001030.3	RPS27	NP_001021.1	ILMN_2160819	0005090424	S	192	GCACAAACGGTAGTTTTGTGTGTTGGCTGCTCCACTGTCCTCTGCCAGCC	1	+	152230698-152230747	1q21.3d	Homo sapiens ribosomal protein S27 (metallopanstimulin 1) (RPS27), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8407955] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8407955] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8908372] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8407955] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MPS-1; MPS1	MPS-1; MPS1
Homo sapiens	RefSeq	XM_926427.1	ILMN_5932	RPS27	NM_001030.3	NM_001030.3		6232	68160923	NM_001030.3	RPS27	NP_001021.1	ILMN_1660498	0003940220	S	36	CACGAGAACATGCCTCTCGCAAAGGATCTCCTTCATCCCTCTCCAGAAGA	1	+	152229888-152229896:152229897-152229902:152230215-152230249	1q21.3d	Homo sapiens ribosomal protein S27 (metallopanstimulin 1) (RPS27), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8407955] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8407955] [evidence TAS]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8908372] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8407955] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MPS-1; MPS1	
Homo sapiens	RefSeq	NM_031438.2	ILMN_183831	NUDT12	NM_031438.2	NM_031438.2		83594	37574615	NM_031438.2	NUDT12	NP_113626.1	ILMN_1745988	0002030050	S	3355	TTGCCAACCTCTGAGAGGTGAAAAGCTATGTAAATAGAAGGAATGGCCAG	5	-	102912538-102912587	5q21.2a	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 12 (NUDT12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]		Catalysis of the reaction: NAD+ + H2O = AMP + NMN [goid 210] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	DKFZP761I172	DKFZP761I172
Homo sapiens	RefSeq	XR_018627.1	ILMN_163703	LOC391504	XR_018627.1	XR_018627.1		391504	113414919	XR_018627.1	LOC391504		ILMN_3200179	0004210333	A	159	GACTCTGGAGGCCGTTCAAATATCCTTGGAAGAGCGCTCACAGGAGAAAC				3p26.3b	PREDICTED: Homo sapiens misc_RNA (LOC391504), miscRNA.					
Homo sapiens	RefSeq	XM_941627.1	ILMN_33146	LOC652233	XM_941627.1	XM_941627.1		652233	89062537	XM_941627.1	LOC652233	XP_946720.1	ILMN_1724488	0003710541	S	125	CAGAGGTGCCTGCGGTGCCAGAAACCATTGAACCCAGCAGAAAAACGTAG					PREDICTED: Homo sapiens hypothetical protein LOC652233 (LOC652233), mRNA.					
Homo sapiens	RefSeq	NM_032889.2	ILMN_7062	MFSD5	NM_032889.3	NM_032889.3		84975	141803311	NM_032889.3	MFSD5	NP_116278.2	ILMN_1702065	0006900600	S	1517	TGAGGAGCCCTATGCCCCTGAGCTGTAACCCCACTCCAGGACAAGATAGC	12	+	51934212-51934239:51934240-51934261	12q13.13e	Homo sapiens major facilitator superfamily domain containing 5 (MFSD5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC11308	MGC11308
Homo sapiens	RefSeq	NM_004220.1	ILMN_19299	ZNF213	NM_004220.1	NM_004220.1		7760	32698677	NM_004220.1	ZNF213	NP_004211.1	ILMN_1758337	0005130332	S	3193	GCTTCATTGGCACTTTGCTGCTGCCTCCTGAGCACTGCCTTCCATGAACA	16	+	3132797-3132806	16p13.3d	Homo sapiens zinc finger protein 213 (ZNF213), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZKSCAN21; CR53	ZKSCAN21; CR53
Homo sapiens	RefSeq	XM_001130699.2	ILMN_169753	LOC729296	XM_001130699.2	XM_001130699.2		729296	169215117	XM_001130699.2	LOC729296	XP_001130699.2	ILMN_3301319	0004670504	M	833	CATGGAAGAGCAGAGAGGCCAATGAGGTGGGGAGGTTGGAAACAAAAGGC				20q13.33a	PREDICTED: Homo sapiens hypothetical LOC729296 (LOC729296), mRNA.					
Homo sapiens	RefSeq	NM_198327.1	ILMN_35306	CAPZA1	NM_006135.2	NM_006135.2		829	89357939	NM_006135.2	CAPZA1	NP_006126.1	ILMN_1680722	0006650632	I	291	AAACGCCGACCAAGAGGGCCCCATGTCAGTTATGCGCGGGAGTGACGTCT	1	+	112963888-112963937	1p13.2c	Homo sapiens capping protein (actin filament) muscle Z-line, alpha 1 (CAPZA1), mRNA.	A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [pmid 9331217] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9331217] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 16130169] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 7665558] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CAPPA1; CAPZ; CAZ1	FLJ11657; FLJ20284; STLR; ST7R
Homo sapiens	RefSeq	NM_052843.2	ILMN_30272	OBSCN	NM_052843.2	NM_052843.2		84033	58331252	NM_052843.2	OBSCN	NP_443075.2	ILMN_1749667	0001690040	S	20135	TGGCAGGAGCCTCAGGACTGTGGACGAAGGATGTGGCCTTGGGCATTTGT	1	+	226615307-226615356	1q42.13c	Homo sapiens obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF (OBSCN), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12527750] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11448995] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ14124; DKFZp666E245; MGC120410; KIAA1556; UNC89; MGC120412; KIAA1639; MGC120411; MGC138590; MGC120409	FLJ14124; DKFZp666E245; MGC120410; KIAA1556; UNC89; MGC120412; KIAA1639; MGC120411; MGC138590; MGC120409
Homo sapiens	RefSeq	NM_021012.3	ILMN_27824	KCNJ12	NM_021012.4	NM_021012.4		3768	118582281	NM_021012.4	KCNJ12	NP_066292.2	ILMN_1794200	0004920010	S	1473	CAAGGGCCTGGACCGCATCTTTCTGGTGTCGCCCATCACCATCTTGCATG	17	+	21260015-21260064	17p11.2b	Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 12 (KCNJ12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8647284] [evidence TAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 7859381] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 7859381] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 7859381] [evidence NAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 7859381] [evidence TAS]	 [goid 5242] [pmid 7859381] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 8200] [pmid 8647284] [evidence TAS];  [goid 15459] [pmid 8647284] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	hIRK1; kcnj12x; hIRK; Kir2.2v; hkir2.2x; KCNJN1; Kir2.2; FLJ14167; IRK2	kcnj12x; hIRK; Kir2.2v; hkir2.2x; KCNJN1; Kir2.2; IRK2
Homo sapiens	RefSeq	XM_001713654.1	ILMN_347287	LOC100133931	XM_001713654.1	XM_001713654.1		100133931	169212978	XM_001713654.1	LOC100133931	XP_001713706.1	ILMN_3245403	0000150112	S	197	TGTGTACCATTCCGACGTTACAATGGTGGAGTTGGCAGGTGTGCGCAGGC					PREDICTED: Homo sapiens hypothetical protein LOC100133931 (LOC100133931), mRNA.					
Homo sapiens	RefSeq	NM_014743.1	ILMN_17992	KIAA0232	NM_014743.2	NM_014743.2		9778	154689750	NM_014743.2	KIAA0232	NP_055558.2	ILMN_1795704	0004490735	S	7483	GTCACTCTGAGACATACACTGGTAACATCTGTGCAAGCCCCTTTCCAGGA	4	+	6884831-6884880	4p16.1e	Homo sapiens KIAA0232 (KIAA0232), transcript variant 1, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	XM_930206.1	ILMN_35227	LOC647176	XM_930206.2	XM_930206.2		647176	113425972	XM_930206.2	LOC647176	XP_935299.1	ILMN_1812904	0004050189	S	84	CCCAGGGGTGCTCCAGGTCCAGCTCTCCTGGCTTAGGGATTCCTTGCCTA	16	-	32730119-32730168	16p11.2b	PREDICTED: Homo sapiens similar to kinase suppressor of ras 1 (LOC647176), mRNA.					
Homo sapiens	RefSeq	XM_001719500.1	ILMN_351570	LOC100132678	XM_001719500.1	XM_001719500.1		100132678	169177310	XM_001719500.1	LOC100132678	XP_001719552.1	ILMN_3248487	0000620477	S	342	GCTGGCAAGTACAGACCAGAGACAAAGCAAGAGAAGCAGCAGAGACTGTT	9	+	45453275-45453324	9p11.2b	PREDICTED: Homo sapiens similar to hCG1993567 (LOC100132678), mRNA.					
Homo sapiens	RefSeq	XM_941068.1	ILMN_46601	LOC651820	XM_941068.1	XM_941068.1		651820	89062194	XM_941068.1	LOC651820	XP_946161.1	ILMN_1738249	0000150088	S	1579	GCTGCCCCTGCATGCTGTCTCCACTTTCTCATCTCCTGCTCTTGAATCAG					PREDICTED: Homo sapiens similar to Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial precursor (CybS) (Succinate-ubiquinone reductase membrane anchor subunit) (QPs3) (CII-4) (Succinate dehydrogenase complex subunit D) (Succinate-ubiquinone oxi... (LOC651820), mRNA.					
Homo sapiens	RefSeq	NR_003136.1	ILMN_166284	FBXO22OS	NR_003136.1	NR_003136.1		692224	112734798	NR_003136.1	FBXO22OS		ILMN_2166706	0004280128	S	399	CTAAATGACAGTCCAACCACACCCGAGGCATCAATATCCAGAGGGTTCCT	15	-	74012526-74012526:76225024-76225072	15q24.2a	Homo sapiens FBXO22 opposite strand (non-protein coding) (FBXO22OS), non-coding RNA.				HsT18082	HsT18082
Homo sapiens	RefSeq	NM_001641.2	ILMN_9983	APEX1	NM_001641.2	NM_001641.2		328	18375500	NM_001641.2	APEX1	NP_001632.2	ILMN_2319344	0003120309	A	929	GGCTTCCCGAAAGCCCCTTGTGCTGTGTGGAGACCTCAATGTGGCACATG	14	+	19995147-19995196	14q11.2b	Homo sapiens APEX nuclease (multifunctional DNA repair enzyme) 1 (APEX1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9119221] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9207062] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11250913] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10559261] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 12524539] [evidence TAS]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [pmid 12524539] [evidence TAS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 12524539] [evidence IDA]	In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 11286553] [evidence TAS]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 1380454] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA binding, selective interaction with deoxyribonucleic acid [goid 51101] [pmid 9119221] [evidence IDA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11286553] [evidence IDA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9119221] [evidence IDA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 7961715] [evidence TAS]; Catalysis of the cleavage of the C-O-P bond 3' to the apurinic or apyrimidinic site in DNA by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate [goid 3906] [pmid 9119221] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks [goid 4520] [pmid 1722334] [evidence TAS]; Catalysis of the endonucleolytic cleavage of RNA in RNA-DNA hybrids to 5'-phosphomonoesters [goid 4523] [pmid 11286553] [evidence TAS]; Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides [goid 4528] [pmid 9119221] [evidence TAS]; Catalysis of the cleavage of the N-C1' glycosidic bond between the damaged DNA base and the deoxyribose sugar, releasing a free base and leaving an apyrimidinic (AP) site. Enzymes with this activity recognize and remove uracil bases in DNA that result from the deamination of cytosine or the misincorporation of dUTP opposite an adenine [goid 4844] [pmid 10805771] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15518571] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12524539] [evidence IPI]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end [goid 8408] [pmid 11286553] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [pmid 9119221] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	APEX; REF1; APE1; APE-1; HAP1; APE; APX; REF-1; APEN	APEX; REF1; APE1; APE-1; HAP1; APE; APX; REF-1; APEN
Homo sapiens	Unigene	Hs.553088	ILMN_111221	HS.553088	Hs.553088		Hs.553088		31946711	BX484683			ILMN_1874673	0003390070	S	444	GCTGCCCAAATTCTACTCTGTCCACTTTTCCACAGACCACCACAAGCCTC	4	-	37273669-37273718		DKFZp686P07243_r1 686 (synonym: hlcc3) Homo sapiens cDNA clone DKFZp686P07243 5, mRNA sequence					
Homo sapiens	RefSeq	XM_926989.1	ILMN_45443	LOC643687	XM_926989.1	XM_926989.1		643687	89059558	XM_926989.1	LOC643687	XP_932082.1	ILMN_1698063	0005420634	S	3	GGCATTTGTACTGTTTGTGCCTCTTCTGTACTGTGGAGCCCATCAGGAAG	X	-	48520196-48520199:48526114-48526159		PREDICTED: Homo sapiens similar to 3-ketoacyl-CoA thiolase, mitochondrial (Beta-ketothiolase) (Acetyl-CoA acyltransferase) (Mitochondrial 3-oxoacyl-CoA thiolase) (T1) (LOC643687), mRNA.					
Homo sapiens	Unigene	Hs.538176	ILMN_103752	HS.538176	Hs.538176		Hs.538176		5449400	AI828729			ILMN_1866901	0001850386	S	406	CACGCTGTTTGCTAGGGAAGAACTGGCCCACAAGGACCCCCAAGACACTT					tr12f11.x1 NCI_CGAP_Ov23 Homo sapiens cDNA clone IMAGE:2218125 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001042706.1	ILMN_171744	IQCJ	NM_001042706.1	NM_001042706.1		654502	111607425	NM_001042706.1	IQCJ	NP_001036171.1	ILMN_3195537	0005390619	A	247	TCAAAGGTGAAAATCATTCAGCGAGCATGGCGAGAGTACCTGCAGCGGCA	3	+	158970583-158970596:158980337-158980372	3q25.33a	Homo sapiens IQ motif containing J (IQCJ), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	XM_940175.1	ILMN_44017	LOC651060	XM_940175.1	XM_940175.1		651060	89033645	XM_940175.1	LOC651060	XP_945268.1	ILMN_1811177	0007610110	S	1157	ATGTCAGCCCTGGGGCACAGAGCTGGGCTCCTGAGAACCCTACAGGACCT					PREDICTED: Homo sapiens similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC651060), mRNA.					
Homo sapiens	RefSeq	XM_942241.1	ILMN_40093	LOC652667	XM_942241.1	XM_942241.1		652667	89076855	XM_942241.1	LOC652667	XP_947334.1	ILMN_1746587	0002680240	S	3	GGGCTCTTCACCCTCCTATTTGACCCACAGAAGGCGGGATGTGGTAACAG					PREDICTED: Homo sapiens similar to ADAM 15 precursor (A disintegrin and metalloproteinase domain 15) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 15) (MDC-15) (Metalloprotease RGD disintegrin protein) (Metargidin) (LOC652667), mRNA.					
Homo sapiens	RefSeq	NM_144701.2	ILMN_12049	IL23R	NM_144701.2	NM_144701.2		149233	24430211	NM_144701.2	IL23R	NP_653302.2	ILMN_1734937	0003140088	S	2210	CTGTGCTCCTACCATCACCATGTAAGAATTCCCGGGAGCTCCATGCCTTT	1	+	67497634-67497683	1p31.3a	Homo sapiens interleukin 23 receptor (IL23R), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	NM_016154.2	ILMN_138960	RAB4B	NM_016154.2	NM_016154.2		53916	21361508	NM_016154.2	RAB4B	NP_057238.2	ILMN_1803136	0007610167	S	1941	GGAGGCCTGTCCAGCACCCACCCTACCCCCATAAAGCATTGTTTACAAAA				19q13.2b	Homo sapiens RAB4B, member RAS oncogene family (RAB4B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence NAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC52123	MGC52123
Homo sapiens	RefSeq	XR_037131.1	ILMN_352287	LOC100134266	XR_037131.1	XR_037131.1		100134266	169210231	XR_037131.1	LOC100134266		ILMN_3248970	0003930167	S	2604	GTGGGGCACGGGCAGCACCAACTCCTACAGGATGGGGAAAGAAGGAAAAT					PREDICTED: Homo sapiens misc_RNA (LOC100134266), miscRNA.					
Homo sapiens	RefSeq	NM_004578.2	ILMN_164113	RAB4A	NM_004578.2	NM_004578.2		5867	19923259	NM_004578.2	RAB4A	NP_004569.2	ILMN_1677824	0005810097	S	1546	CTGGAGTACCTGCTCTGTTTTTGGCTGTGAGACTAGCACTAAGGATTCTG	1	+	227506844-227506893	1q42.13d	Homo sapiens RAB4A, member RAS oncogene family (RAB4A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 2501306] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	RAB4	RAB4
Homo sapiens	RefSeq	NM_016486.2	ILMN_22324	TMEM69	NM_016486.2	NM_016486.2		51249	24475971	NM_016486.2	TMEM69	NP_057570.1	ILMN_1681972	0001230397	S	479	CTGGCAGGACTAATCCCCTTCGTTGCTCCACCACTGGTCATGCTGATGAC	1	+	45931724-45931773	1p34.1b	Homo sapiens transmembrane protein 69 (TMEM69), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C1orf154; RP11-767N6.4; FLJ21029	C1orf154; RP11-767N6.4; FLJ21029
Homo sapiens	RefSeq	XM_001723395.1	ILMN_351549	LOC100130354	XM_001723395.1	XM_001723395.1		100130354	169165812	XM_001723395.1	LOC100130354	XP_001723447.1	ILMN_3272237	0001660100	M	21	TGCAGAGCAAACGAGTGCAGTCAATTCAGCCAGGGGCTTGCAAGAGGGAG				3p24.2a	PREDICTED: Homo sapiens hypothetical protein LOC100130354 (LOC100130354), mRNA.					
Homo sapiens	RefSeq	NM_014016.2	ILMN_19838	SACM1L	NM_014016.2	NM_014016.2		22908	41281578	NM_014016.2	SACM1L	NP_054735.2	ILMN_1765019	0002600204	S	3367	CTGAACTGCTAATGTGGCTGCTTTGTAGGGAATGGACTAATATCAGTGTG	3	+	45761753-45761802	3p21.31j	Homo sapiens SAC1 suppressor of actin mutations 1-like (yeast) (SACM1L), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence ISS]	KIAA0851; SAC1; DKFZp686A0231	KIAA0851; SAC1; DKFZp686A0231
Homo sapiens	RefSeq	XM_930835.1	ILMN_37101	LOC653073	XM_930835.1	XM_930835.1		653073	89038118	XM_930835.1	LOC653073	XP_935928.1	ILMN_1711122	0000610465	I	76	GGGGGATGACCTGGCAAACTCCACCCCTTCTCACTCTGTCCTGGCCCCTT	15	+	28170978-28171027	15q13.2a	PREDICTED: Homo sapiens similar to golgi autoantigen, golgin family member, transcript variant 3 (LOC653073), mRNA.					
Homo sapiens	RefSeq	NM_004816.2	ILMN_12054	C9ORF61	NM_004816.2	NM_004816.2		9413	37674229	NM_004816.2	C9orf61	NP_004807.2	ILMN_2179717	0002000390	S	2169	TAGTTGCCTTTGGCCTTTCACTGCTCTGCGATTTGGCAGGAAATAAGGCG	9	+	71196936-71196985	9q21.11a	Homo sapiens chromosome 9 open reading frame 61 (C9orf61), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC142243; RP11-548B3.1; X123; MGC142245	MGC142243; RP11-548B3.1; X123; MGC142245
Homo sapiens	RefSeq	NM_145208.1	ILMN_10728	MBD3L1	NM_145208.1	NM_145208.1		85509	21624655	NM_145208.1	MBD3L1	NP_660209.1	ILMN_1679822	0004210278	S	369	TCCTGCCCCATGCCCCACCTTGCCTGCTCTTCAGATGCGGTGGAGATAAT	19	+	8814700-8814749	19p13.2d	Homo sapiens methyl-CpG binding domain protein 3-like 1 (MBD3L1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		MGC138263; MBD3L; MGC138269	MGC138263; MBD3L; MGC138269
Homo sapiens	RefSeq	NM_014621.2	ILMN_1115	HOXD4	NM_014621.2	NM_014621.2		3233	23397671	NM_014621.2	HOXD4	NP_055436.2	ILMN_1672091	0002060669	S	1088	TGCTGTCACCTCGCTGGGCTCTAAGGTACTGTGGGGTGGACCTGGGACAA	2	+	176725987-176726036	2q31.1h	Homo sapiens homeobox D4 (HOXD4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 2879245] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX4B; HHO.C13; HOX4; HOX-5.1; Hox-4.2	HOX4B; HHO.C13; HOX4; HOX-5.1; Hox-4.2
Homo sapiens	Unigene	Hs.112955	ILMN_75221	HS.112955	Hs.112955		Hs.112955		34529347	AK123731			ILMN_1867418	0005310600	S	1830	GGCATAGCCAATACAGGCAAACAGCACGATGATGCTGTCACTGGGAAGAG	10	-	12247096-12247145		Homo sapiens cDNA FLJ41737 fis, clone HSYRA2001983					
Homo sapiens	RefSeq	XM_929317.1	ILMN_175276	LOC728929	XM_001132059.1	XM_001132059.1		728929	113427746	XM_001132059.1	LOC728929	XP_001132059.1	ILMN_1690705	0006290288	S	1107	ATGACCTCCCAGGCAAACCCAGAAGCACTCTCCGCGCCAACGCTCCAGGA	18	-	42803376-42803425	18q21.1b	PREDICTED: Homo sapiens similar to transcription elongation factor B polypeptide 3C (LOC728929), mRNA.					
Homo sapiens	RefSeq	NM_006943.2	ILMN_21880	SOX12	NM_006943.2	NM_006943.2		6666	21264338	NM_006943.2	SOX12	NP_008874.2	ILMN_1736974	0000130626	S	4396	ACGCCCTTCCTGGGGCAGCCTGTATCTGGTGTCTGAGTGAGGCATGGTAT	20	+	258634-258683	20p13f	Homo sapiens SRY (sex determining region Y)-box 12 (SOX12), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9215677] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9215677] [evidence TAS]	SOX22	SOX22
Homo sapiens	RefSeq	NM_006530.2	ILMN_16428	YEATS4	NM_006530.2	NM_006530.2		8089	29337287	NM_006530.2	YEATS4	NP_006521.1	ILMN_1801387	0003370747	S	949	GGTGGGCTTCACTGGAGAAATGGACTTACTGCAAATGCTGTGATGTTTCT	12	+	68070407-68070456	12q15c	Homo sapiens YEATS domain containing 4 (YEATS4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9302258] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10913114] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 10913114] [evidence NAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 10913114] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 10913114] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9302258] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 10913114] [evidence NAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10913114] [evidence IPI]	B230215M10Rik; GAS41; NUBI-1; YAF9; 4930573H17Rik	B230215M10Rik; GAS41; NUBI-1; YAF9; 4930573H17Rik
Homo sapiens	RefSeq	NM_025078.3	ILMN_5626	PQLC1	NM_025078.3	NM_025078.3		80148	34222340	NM_025078.3	PQLC1	NP_079354.2	ILMN_1798620	0004640131	S	2314	CTTGAATGTCTGAGTGAGGGTCCTGCTTAGCTCTTTGGCCTGTGAGATGC	18	-	75763552-75763601	18q23d	Homo sapiens PQ loop repeat containing 1 (PQLC1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ22378	FLJ22378
Homo sapiens	RefSeq	NM_018109.3	ILMN_366325	MTPAP	NM_018109.3	NM_018109.3		55149	190194364	NM_018109.3	MTPAP	NP_060579.3	ILMN_3251555	0006130379	S	5093	CAGGCATGAGCCACCACGCCTGGCTGCAAAGACCTTTTAATACACAGTTT	10	-	30599207-30599256	10p11.23a	Homo sapiens mitochondrial poly(A) polymerase (MTPAP), nuclear gene encoding mitochondrial protein, mRNA.					
Homo sapiens	RefSeq	XM_001724681.1	ILMN_339558	LOC100134648	XM_001724681.1	XM_001724681.1		100134648	169170551	XM_001724681.1	LOC100134648	XP_001724733.1	ILMN_3204734	0007570228	A	61	CGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCC	7	+	99293870-99293919		PREDICTED: Homo sapiens similar to hCG2024106, transcript variant 2 (LOC100134648), mRNA.					
Homo sapiens	RefSeq	XM_001724681.1	ILMN_339558	LOC100134648	XM_001724681.1	XM_001724681.1		100134648	169170551	XM_001724681.1	LOC100134648	XP_001724733.1	ILMN_3231577	0004880411	I	441	ATCCAGACACGGGGACTGCAGAGAAAGGCTGTGTGCATCCGCTGTCTACT	7	+	99307440-99307489		PREDICTED: Homo sapiens similar to hCG2024106, transcript variant 2 (LOC100134648), mRNA.					
Homo sapiens	RefSeq	NM_006697.1	ILMN_20829	MTMR11	NM_006697.1	NM_006697.1		10903	5870890	NM_006697.1	MTMR11	NP_006688.1	ILMN_1698246	0001030255	I	1992	CACCAGAAGTAGCAGAGAAGCAGGGGGCCAGAGCTACAACAGTATTCTTC	1	-	148167862-148167911	1q21.2a	Homo sapiens myotubularin related protein 11 (MTMR11), transcript variant 1, mRNA.		The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [evidence IEA]	Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	CRA; RP11-212K13.1	CRA; RP11-212K13.1
Homo sapiens	Unigene	Hs.561432	ILMN_114867	HS.561432	Hs.561432		Hs.561432		16551535	AK056198			ILMN_1861651	0007380468	S	1648	GTCAGATCACACCAACCCTCAGAACTCTCCAATAGACGACCATGGCACTC	5	+	10492822-10492871		Homo sapiens cDNA FLJ31636 fis, clone NT2RI2003481					
Homo sapiens	RefSeq	XR_039674.1	ILMN_350235	LOC100134734	XR_039674.1	XR_039674.1		100134734	169170372	XR_039674.1	LOC100134734		ILMN_3247597	0006860711	S	581	TCCCGGTGGCCTCTGCAGGCCCAAGTCATCCTCAGGTCAGCCTGGAAGTG	7	-	51462407-51462456		PREDICTED: Homo sapiens misc_RNA (LOC100134734), miscRNA.					
Homo sapiens	RefSeq	XM_936272.2	ILMN_41194	LOC642127	XM_936272.2	XM_936272.2		642127	169167868	XM_936272.2	LOC642127	XP_941365.2	ILMN_3286154	0002360129	M	365	CAGCTCTGATGCAGTCTATCACTGGCAGATCGGTGTCTGAGAACACCGCC					PREDICTED: Homo sapiens similar to TBP-associated factor 11 (LOC642127), mRNA.					
Homo sapiens	RefSeq	NM_002105.2	ILMN_23585	H2AFX	NM_002105.2	NM_002105.2		3014	52630339	NM_002105.2	H2AFX	NP_002096.1	ILMN_2200331	0006980497	S	914	CGGGGAGGCCGCAGCACCTTCTGGAAGACTTGGCCTTCCGCTCTGACGCA	11	-	118965214-118965263	11q23.3e	Homo sapiens H2A histone family, member X (H2AFX), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence NAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15604234] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11331621] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10959836] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12419185] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12556884] [evidence EXP]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The error-free repair of a double-strand break in DNA in which the broken DNA molecule is repaired using homologous sequences. A strand in the broken DNA searches for a homologous region in an intact chromosome to serve as the template for DNA synthesis. The restoration of two intact DNA molecules results in the exchange, reciprocal or nonreciprocal, of genetic material between the intact DNA molecule and the broken DNA molecule [goid 724] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [pmid 2587254] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17498979] [evidence IPI]	H2AX; H2A.X; H2A/X	H2AX; H2A.X; H2A/X
Homo sapiens	RefSeq	XM_943871.1	ILMN_36075	LOC649723	XM_943871.1	XM_943871.1		649723	89047287	XM_943871.1	LOC649723	XP_948964.1	ILMN_2104693	0005560477	S	203	GTCCACACGACCCCAAAGACAAGGGCGGGGGCGGGGGCTGCGGGTACCTG					PREDICTED: Homo sapiens hypothetical LOC649723 (LOC649723), mRNA.					
Homo sapiens	RefSeq	NM_001001548.1	ILMN_22014	CD36	NM_001001548.1	NM_001001548.1		948	48375179	NM_001001548.1	CD36	NP_001001548.1	ILMN_1784863	0001010592	I	1843	CACCATCATCCCAGTAGCTGCCCTATTCAACTGCAACAGTCTCCAGGACC	7	+	80143770-80143819	7q21.11c	Homo sapiens CD36 molecule (thrombospondin receptor) (CD36), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 2468669] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7693034] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1715582] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2468669] [evidence TAS]; The lipid bilayer surrounding the platelet alpha granule [goid 31092] [pmid 7693034] [evidence EXP]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7518447] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2468670] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 2468670] [evidence TAS]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [pmid 9568716] [evidence TAS]; The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte [goid 43277] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a low-density lipoprotein to initiate a change in cell activity [goid 5041] [pmid 9568716] [evidence TAS]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [pmid 9568716] [evidence IDA]	GPIV; FAT; GP3B; CHDS7; SCARB3; PASIV; GP4	GPIV; FAT; GP3B; CHDS7; SCARB3; PASIV; GP4
Homo sapiens	RefSeq	NM_000440.2	ILMN_356914	PDE6A	NM_000440.2	NM_000440.2		5145	170650673	NM_000440.2	PDE6A	NP_000431.2	ILMN_3251409	0003390576	S	5142	CTGGCAAGTATGCAATACCTAGCGGAATGCACTGGCCTGATCAGCATTCA	5	-	149237969-149238018	5q33.1c	Homo sapiens phosphodiesterase 6A, cGMP-specific, rod, alpha (PDE6A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 7493036] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]		
Homo sapiens	RefSeq	NM_173081.3	ILMN_365392	ARMC3	NM_173081.3	NM_173081.3		219681	189409123	NM_173081.3	ARMC3	NP_775104.2	ILMN_3243057	0001850242	S	2506	GAATTGGCATTGGTTGCTCCCTAGTTCGCGGAGAGTACGGTAGAGCGTGG	10	+	23326212-23326261	10p12.2a	Homo sapiens armadillo repeat containing 3 (ARMC3), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_004861.1	ILMN_28424	GAL3ST1	NM_004861.1	NM_004861.1		9514	4758087	NM_004861.1	GAL3ST1	NP_004852.1	ILMN_1729905	0001260468	S	1425	CTGTGGGTCACCAAGCTCTGGAAGTTCATTCGCGATTTCCTGCGGTGGTG	22	-	30950940-30950989	22q12.2b	Homo sapiens galactose-3-O-sulfotransferase 1 (GAL3ST1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9030544] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9030544] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 9030544] [evidence TAS]; The chemical reactions and pathways resulting in the formation of galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6682] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]	Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + a galactosylceramide = adenosine 3',5'-bisphosphate + a galactosylceramidesulfate [goid 1733] [evidence IEA]; Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [pmid 9030544] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CST	CST
Homo sapiens	RefSeq	NM_182639.1	ILMN_2724	HPS1	NM_182639.1	NM_182639.1		3257	33286413	NM_182639.1	HPS1	NP_872577.1	ILMN_2267787	0002570131	I	1282	CGTGCCTCCTAAGGCTTGAGTGCAGGTACCCGTGTTCCTAGAGCACAGGA	10	-	100190391-100190427:100190888-100190900	10q24.2a	Homo sapiens Hermansky-Pudlak syndrome 1 (HPS1), transcript variant 3, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8896559] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10625677] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10625677] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 10625677] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8896559] [evidence TAS]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 11836498] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [pmid 10625677] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [pmid 12663659] [evidence IPI]	HPS; MGC5277	HPS; MGC5277
Homo sapiens	RefSeq	NM_145238.2	ILMN_18573	ZSCAN20	NM_145238.3	NM_145238.3		7579	148596976	NM_145238.3	ZSCAN20	NP_660281.2	ILMN_1765000	0002140402	S	3978	CTCGCACTGGTCACACATCTGTAAGTGGGAGAGGCAGGATTCAACAGATC	1	+	33734342-33734391	1p35.1a	Homo sapiens zinc finger and SCAN domain containing 20 (ZSCAN20), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZFP-31; ZNF31; KOX29; ZNF360	ZFP-31; ZNF31; KOX29; ZNF360
Homo sapiens	RefSeq	NM_152828.2	ILMN_2577	SNX3	NM_152828.2	NM_152828.2		8724	34304375	NM_152828.2	SNX3	NP_690041.1	ILMN_1795557	0007610201	I	611	GACATCAGAGGCAAGGAGTCATGGAAGGACGTGGTGTGCTCAGAATGATG	6	-	108650153-108650202	6q21e	Homo sapiens sorting nexin 3 (SNX3), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11279102] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 9819414] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	SDP3; MGC17570; SNX3A	SNX3A; SDP3; MGC17570
Homo sapiens	RefSeq	NM_024943.1	ILMN_13771	TMEM156	NM_024943.1	NM_024943.1		80008	13376422	NM_024943.1	TMEM156	NP_079219.1	ILMN_2095660	0002000364	S	1805	AACCAAGATCACGCCACTGCATTACAGCCTGGTGCAGAGCAAGACTCTGT	4	-	38968445-38968494	4p14c	Homo sapiens transmembrane protein 156 (TMEM156), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ23235	FLJ23235
Homo sapiens	RefSeq	NM_024943.1	ILMN_13771	TMEM156	NM_024943.1	NM_024943.1		80008	13376422	NM_024943.1	TMEM156	NP_079219.1	ILMN_1810374	0003390253	S	1036	CGAATATCCCCGGGCAAGTTGGACCGAGCCCTTTGAAGAATACTCAGAAG	4	-	38969214-38969262:38972652-38972652	4p14c	Homo sapiens transmembrane protein 156 (TMEM156), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ23235	FLJ23235
Homo sapiens	RefSeq	XM_928663.1	ILMN_43872	LOC645649	XM_928663.1	XM_928663.1		645649	89027817	XM_928663.1	LOC645649	XP_933756.1	ILMN_1691252	0000630731	S	2638	CGCTTTGTCCTTCAGTGCCTGCCTCCTTTTTCAGCTCGTCTTGCGACTCC	8	-	7608635-7608684		PREDICTED: Homo sapiens hypothetical protein LOC645649 (LOC645649), mRNA.					
Homo sapiens	RefSeq	NM_001035004.1	ILMN_13305	KCNIP4	NM_001035004.1	NM_001035004.1		80333	78190487	NM_001035004.1	KCNIP4	NP_001030176.1	ILMN_2387865	0003890711	A	2160	TCTGGTGTAGAGATAGGATGTTGAAAGCTGCCCTGCTATCACCAGTGTAG	4	-	20730408-20730457	4p15.31d-p15.31b	Homo sapiens Kv channel interacting protein 4 (KCNIP4), transcript variant 6, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC44947; KCHIP4; CALP	MGC44947; KCHIP4; CALP
Homo sapiens	RefSeq	NM_025221.4	ILMN_13305	KCNIP4	NM_001035004.1	NM_001035004.1		80333	78190487	NM_001035004.1	KCNIP4	NP_001030176.1	ILMN_1679580	0003290471	A	1378	CCAGTTTCTATGGCCTTCCCACCTTCTGTTAGAAATTAGTTTTATCTGGC	4	-	20731190-20731239	4p15.31d-p15.31b	Homo sapiens Kv channel interacting protein 4 (KCNIP4), transcript variant 6, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC44947; KCHIP4; CALP	MGC44947; KCHIP4; CALP
Homo sapiens	RefSeq	XM_928091.1	ILMN_31527	FLJ37673	XM_928091.1	XM_928091.1		285456	88976656	XM_928091.1	FLJ37673	XP_933184.1	ILMN_1786064	0004810196	A	3926	ACAAGCTGTCAGGGAGGTTGCCCTGGCTGGGAAGACAGACATCAGACAAC	4	-	109678885-109678934	4q25b	PREDICTED: Homo sapiens hypothetical protein FLJ37673 (FLJ37673), mRNA.					
Homo sapiens	RefSeq	NM_018938.2	ILMN_23666	PCDHB4	NM_018938.2	NM_018938.2		56131	14195610	NM_018938.2	PCDHB4	NP_061761.1	ILMN_1722673	0006290008	S	3214	CTCCCCAAAATCAAGACTCTTGAGAGCATCATAGGTCTCCTTGTGCTACC	5	+	140484978-140485027	5q31.3b	Homo sapiens protocadherin beta 4 (PCDHB4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 12231349] [evidence TAS]; The biosynthesis of a synapse [goid 7416] [pmid 12231349] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 11322959] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11322959] [evidence NAS]	PCDH-BETA4	PCDH-BETA4
Homo sapiens	RefSeq	Hs.577850	ILMN_164939	LOC728183	XM_001133612.1	XM_001133612.1		728183	113424495	XM_001133612.1	LOC728183	XP_001133612.1	ILMN_1848311	0006110669	S	245	GCAGGAGCACTAGAAAGGGAGCCAATCGCATTACTGAGAGAGCTGGGGCC				13q33.1c	PREDICTED: Homo sapiens hypothetical LOC728183 (LOC728183), mRNA.					
Homo sapiens	RefSeq	NM_198431.1	ILMN_25293	HSPA4	NM_198431.1	NM_198431.1		3308	38327040	NM_198431.1	HSPA4	NP_940833.1	ILMN_2395043	0005090368	A	674	CACAGCTGTGCCTTCGGATTCAGACAAGAAGCTTCCTGAAATGGACATTG	5	+	132467973-132468022	5q31.1c	Homo sapiens heat shock 70kDa protein 4 (HSPA4), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 8335910] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8335910] [evidence NAS]	HS24/P52; MGC131852; APG-2; hsp70RY; hsp70; RY	HS24/P52; MGC131852; APG-2; hsp70RY; hsp70; RY
Homo sapiens	RefSeq	NM_001017986.1	ILMN_22177	FCGR1B	NM_001017986.1	NM_001017986.1		2210	63055062	NM_001017986.1	FCGR1B	NP_001017986.1	ILMN_2261600	0002710709	I	78	GCAGCCTCCATGGGTCAGCGTGTTCCAAGAGGAAACCGTAACCTTGCACT	1	-	120736083-120736132	1p11.2a	Homo sapiens Fc fragment of IgG, high affinity Ib, receptor (CD64) (FCGR1B), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1430234] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1430234] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with the Fc region of an immunoglobulin protein to initiate a change in cell activity [goid 19763] [pmid 1430234] [evidence NAS]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	CD64; IGFRB	CD64; IGFRB
Homo sapiens	RefSeq	XM_932335.1	ILMN_40958	LOC643171	XM_932335.1	XM_932335.1		643171	89036895	XM_932335.1	LOC643171	XP_937428.1	ILMN_1747380	0007050037	I	112	GGTCCTGGGGAGCCACGGAAGGTTGTGGGTGCCAGAGGGTTTTGGTCAGA	13	-	83769-83818		PREDICTED: Homo sapiens similar to gamma-glutamyltransferase 2, transcript variant 17 (LOC643171), mRNA.					
Homo sapiens	RefSeq	NM_153269.1	ILMN_3102	C20ORF96	NM_153269.1	NM_153269.1		140680	23943927	NM_153269.1	C20orf96	NP_695001.1	ILMN_1808633	0000130056	S	1301	TCCAGGACCGGATCTCCATTCAGACCCTGATCTACAGTCTCCCTGCTCCC	20	-	251728-251777	20p13f	Homo sapiens chromosome 20 open reading frame 96 (C20orf96), mRNA.				FLJ40075; dJ1103G7.2	FLJ40075; dJ1103G7.2
Homo sapiens	RefSeq	NM_013314.2	ILMN_178192	BLNK	NM_013314.2	NM_013314.2		29760	40353774	NM_013314.2	BLNK	NP_037446.1	ILMN_2142935	0003140100	S	1393	GCCTTGGGCAGAAAGAAAAATGGTGAAGAGTACTTTGGAAGTGTTGCTGA	10	-	97941818-97941838:97946654-97946682	10q23.33d-q24.1a	Homo sapiens B-cell linker (BLNK), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 9341187] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9697839] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [pmid 9697839] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9341187] [evidence IDA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 10583958] [evidence NAS]	The binding activity of a molecule that brings together a transmembrane receptor protein kinase and one or more other molecules, permitting them to function in a coordinated way [goid 5068] [pmid 9697839] [evidence TAS]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9697839] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SLP65; MGC111051; Ly57; SLP-65; BASH; BLNK-s	SLP65; MGC111051; Ly57; SLP-65; BASH; BLNK-s
Homo sapiens	RefSeq	NM_001024215.1	ILMN_28883	FBLIM1	NM_001024215.1	NM_001024215.1		54751	66932985	NM_001024215.1	FBLIM1	NP_001019386.1	ILMN_2353143	0004120292	A	1033	ATTGGGGATGAGAGCTTTGCCCTGGGCAGCCAGAACGAGGTGTACTGCCT	1	+	15973814-15973863	1p36.21a	Homo sapiens filamin binding LIM protein 1 (FBLIM1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp434G171; CAL; RP11-169K16.5; FBLP1; FBLP-1	DKFZp434G171; CAL; RP11-169K16.5; FBLP1; FBLP-1
Homo sapiens	RefSeq	NM_152465.1	ILMN_21242	PROCA1	NM_152465.1	NM_152465.1		147011	22748972	NM_152465.1	PROCA1	NP_689678.1	ILMN_1663179	0004490196	S	1109	CACAGTCCAGGCCAAAAAGACAGGGGCAAAGCCCTCACAAGCCAGGAAGG	17	-	27030622-27030671	17q11.2a	Homo sapiens protein interacting with cyclin A1 (PROCA1), mRNA.				MGC39650	MGC39650
Homo sapiens	RefSeq	NM_002506.2	ILMN_18062	NGF	NM_002506.2	NM_002506.2		4803	70995318	NM_002506.2	NGF	NP_002497.2	ILMN_1716608	0004230369	S	771	GTACCACGACTCACACCTTTGTCAAGGCGCTGACCATGGATGGCAAGCAG	1	-	115828765-115828814	1p13.2a	Homo sapiens nerve growth factor (beta polypeptide) (NGF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 16284401] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11157096] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 12787574] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 9182757] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 16284401] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10629055] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7806500] [evidence EXP]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 8615794] [evidence EXP]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 12787574] [evidence EXP]	The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 16939974] [evidence EXP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]; The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. Pain is medically defined as the physical sensation of discomfort or distress caused by injury or illness, so can hence be described as a harmful stimulus which signals current (or impending) tissue damage. Pain may come from extremes of temperature, mechanical damage, electricity or from noxious chemical substances [goid 19233] [evidence IEA]; The generation of a mature nerve growth factor by proteolysis of a precursor [goid 32455] [pmid 12787574] [evidence EXP]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of axon extension [goid 45773] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IEA]	 [goid 5057] [evidence IEA]; Interacting selectively with the nerve growth factor receptor [goid 5163] [pmid 14985763] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	NGF; MGC161428; HSAN5; Beta-NGF; MGC161426; NGFB	NGF; MGC161428; HSAN5; Beta-NGF; MGC161426; NGFB
Homo sapiens	RefSeq	XM_939948.1	ILMN_46663	LOC390876	XM_372704.4	XM_372704.4		390876	113428045	XM_372704.4	LOC390876	XP_372704.4	ILMN_1666477	0006900139	A	272	CCCCAGTGCGGAAGTGCGCGGTCAAGGCCCGAGTGGCGCGTTGTCAATAA	19	+	3082369-3082418	19p13.3f	PREDICTED: Homo sapiens similar to 60S ribosomal protein L35 (LOC390876), mRNA.					
Homo sapiens	RefSeq	NM_001024460.1	ILMN_1490	VNN3	NM_001024460.1	NM_001024460.1		55350	66932889	NM_001024460.1	VNN3	NP_001019631.1	ILMN_2387680	0003370041	A	1001	CAGAGAGTGGTCAGCTGTTGCTATCAGAACTGAAGTCTCGGCCCCGCCGT	6	-	133087707-133087756	6q23.2b	Homo sapiens vanin 3 (VNN3), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [pmid 11491533] [evidence NAS]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	MGC171203; HSA238982	MGC171203; HSA238982
Homo sapiens	RefSeq	NM_001024460.1	ILMN_1490	VNN3	NM_001024460.1	NM_001024460.1		55350	66932889	NM_001024460.1	VNN3	NP_001019631.1	ILMN_1804935	0004010133	A	1554	GGCCCTGTATGGAAGAGTGTTTGAGAAGGACCCTCCACGCTTAGGGCAGG	6	-	133085777-133085826	6q23.2b	Homo sapiens vanin 3 (VNN3), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [pmid 11491533] [evidence NAS]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	MGC171203; HSA238982	MGC171203; HSA238982
Homo sapiens	RefSeq	NM_207040.1	ILMN_17933	TCF12	NM_207040.1	NM_207040.1		6938	46370085	NM_207040.1	TCF12	NP_996923.1	ILMN_1772614	0006580537	I	73	GTGCTTATCCTGTCCCTGGAATGGGCAGCAATTCTTTGATGTATTACTAC	15	+	55299019-55299068	15q21.3d	Homo sapiens transcription factor 12 (TCF12), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8163514] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 1312219] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 1312219] [evidence TAS]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 8163514] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]	HEB; HsT17266; HTF4	HEB; HsT17266; HTF4
Homo sapiens	RefSeq	NM_024684.2	ILMN_26165	C11ORF67	NM_024684.2	NM_024684.2		28971	34328078	NM_024684.2	C11orf67	NP_078960.1	ILMN_1779163	0003310228	S	41	CGCCGTTTGGGAACGCAACTTTGAGGAGACAGTGCGGTGGACTTCAGTGA	11	+	77209896-77209935:77231173-77231182	11q14.1a	Homo sapiens chromosome 11 open reading frame 67 (C11orf67), mRNA.				FLJ21035; MGC3367; PTD015	FLJ21035; MGC3367; PTD015
Homo sapiens	RefSeq	NM_030630.1	ILMN_5120	C17ORF28	NM_030630.1	NM_030630.1		283987	29825822	NM_030630.1	C17orf28	NP_085133.1	ILMN_1654013	0004260088	S	3166	CTCTGGCCTCTGGGTCCCACCACCCAGCCCCCCGTGTCAGAACAATCTTT	17	-	70458476-70458525	17q25.1c	Homo sapiens chromosome 17 open reading frame 28 (C17orf28), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ43526; DMC1	FLJ43526; DMC1
Homo sapiens	RefSeq	XR_038304.1	ILMN_338620	LOC644339	XR_038304.1	XR_038304.1		644339	169217618	XR_038304.1	LOC644339		ILMN_3280042	0003060164	M	627	GGGCCGGATCGCGGACTGTGGAGTAGATCACAGATTTGGGATCGCGGATT					PREDICTED: Homo sapiens misc_RNA (LOC644339), miscRNA.					
Homo sapiens	RefSeq	NM_198974.1	ILMN_13147	PTK9	NM_198974.1	NM_198974.1		5756	40068476	NM_198974.1	PTK9	NP_945325.1	ILMN_1734510	0004290592	I	477	TTTTGGTCACGTAGGGAAGAGCTGGGACAGTGGAGGCGACTGGGGCTTCA	12	-	42485919-42485968	12q12f	Homo sapiens PTK9 protein tyrosine kinase 9 (PTK9), transcript variant 2, mRNA.				MGC41876; MGC23788; A6	MGC41876; MGC23788; A6
Homo sapiens	Unigene	Hs.559766	ILMN_113837	HS.559766	Hs.559766		Hs.559766		23679987	BU740415			ILMN_1912807	0006060274	S	426	GTAAAGCCGGGGAAGTGTGCAGTGGTGAAGTGCTGGGTCCAAATTCCAGC	1	+	176776738-176776787		UI-E-EJ0-ahv-o-12-0-UI.s2 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahv-o-12-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002004.2	ILMN_18516	FDPS	NM_002004.2	NM_002004.2		2224	41281370	NM_002004.2	FDPS	NP_001995.1	ILMN_1804248	0006900398	S	1273	GAGATTGCAAGGGCGGGGAGAGGAGGCTCTCAATAAATAATCGTGTAACC	1	+	153557029-153557078	1q22a	Homo sapiens farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (FDPS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [pmid 2690933] [evidence TAS]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = diphosphate + geranyl diphosphate [goid 4161] [evidence IEA]; Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = diphosphate + trans,trans-farnesyl diphosphate [goid 4337] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FPS	FPS
Homo sapiens	RefSeq	XM_001718691.1	ILMN_349522	LOC100134582	XM_001718691.1	XM_001718691.1		100134582	169170761	XM_001718691.1	LOC100134582	XP_001718743.1	ILMN_3247118	0002120022	S	181	GGCTCTCTGATGAGCTTTCTGGGGTTTGGAAGAGTTCAGTCACCCCACAC	7	+	131102042-131102080:131146314-131146324		PREDICTED: Homo sapiens hypothetical LOC100134582 (LOC100134582), mRNA.					
Homo sapiens	Unigene	Hs.543654	ILMN_107213	HS.543654	Hs.543654		Hs.543654		6946761	AW418829			ILMN_1860733	0005360187	S	469	GGTAGGATCTCTGGAAGGTAATTAGATCATGAGGAAGGAGCCCTCATGAA	4	+	31649138-31649187		ha21g02.x1 NCI_CGAP_Kid12 Homo sapiens cDNA clone IMAGE:2874386 3, mRNA sequence					
Homo sapiens	RefSeq	NR_002719.1	ILMN_4288	TOP1P1	NR_002719.1	NR_002719.1		7151	84871998	NR_002719.1	TOP1P1		ILMN_2086952	0006620438	S	1824	GACTGAAACCATTTTCCCATCATCCTTTGTTCGATGAGCATTCGATGTAC	1	+	169576482-169576531	1q24.3a	Homo sapiens topoisomerase (DNA) I pseudogene 1 (TOP1P1), non-coding RNA.					
Homo sapiens	RefSeq	XR_000998.1	ILMN_4288	TOP1P1	NR_002719.1	NR_002719.1		7151	84871998	NR_002719.1	TOP1P1		ILMN_1802922	0004070519	A	2285	GCCTCCTTTTACCATCTCTAGTAAAATTAATTAGCTTCACAGATACCCTC	1	+	169576943-169576992	1q24.3a	Homo sapiens topoisomerase (DNA) I pseudogene 1 (TOP1P1), non-coding RNA.					
Homo sapiens	RefSeq	XM_001714258.1	ILMN_334500	LOC100134601	XM_001714258.1	XM_001714258.1		100134601	169170449	XM_001714258.1	LOC100134601	XP_001714310.1	ILMN_3235289	0004880102	S	272	ACCCAAATCTTCTGTAGTCAAGAACAAGGAGCCAGTGGTGCAGACACAGA	7	-	61842944-61842977:61842978-61842993		PREDICTED: Homo sapiens hypothetical protein LOC100134601 (LOC100134601), mRNA.					
Homo sapiens	RefSeq	NM_152400.1	ILMN_18245	C4ORF32	NM_152400.1	NM_152400.1		132720	22748852	NM_152400.1	C4orf32	NP_689613.1	ILMN_1700257	0004590167	S	1761	TTGGGGCAGTCAGGCATTTGTATCTTTGGTAGGGCAACAAGTAAAACATG	4	+	113328846-113328895	4q25f	Homo sapiens chromosome 4 open reading frame 32 (C4orf32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ39370	FLJ39370
Homo sapiens	RefSeq	NM_152400.1	ILMN_18245	C4ORF32	NM_152400.1	NM_152400.1		132720	22748852	NM_152400.1	C4orf32	NP_689613.1	ILMN_2069821	0000290368	S	2267	TGATGTACAAAATAACAGCTCTGGTTCCACCAGTACCTAATGTTGAAAAC	4	+	113329352-113329401	4q25f	Homo sapiens chromosome 4 open reading frame 32 (C4orf32), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ39370	FLJ39370
Homo sapiens	RefSeq	XM_001717547.1	ILMN_351138	LOC100131165	XM_001717547.1	XM_001717547.1		100131165	169214172	XM_001717547.1	LOC100131165	XP_001717599.1	ILMN_3294405	0006620717	M	3521	GCATCCTGTTGCCTCTTGTTTTGAGGGTGACTGGTGGTTACCTGCTAGGG				19p13.2e	PREDICTED: Homo sapiens hypothetical protein LOC100131165 (LOC100131165), mRNA.					
Homo sapiens	Unigene	Hs.540510	ILMN_105193	HS.540510	Hs.540510		Hs.540510		2904829	AA831730			ILMN_1910608	0001570243	S	54	GAGCACAGACTCTCTCAGGCAAGCCGTCTGGTTCCTTGCTATTTCGCTAG	16	-	66108047-66108096		oc85d12.s1 NCI_CGAP_GCB1 Homo sapiens cDNA clone IMAGE:1356503 3, mRNA sequence					
Homo sapiens	RefSeq	XM_931336.1	ILMN_38293	LOC653107	XM_931336.1	XM_931336.1		653107	89031078	XM_931336.1	LOC653107	XP_936429.1	ILMN_1803313	0003390332	I	642	GCTACCTTCCCTGTCCCACGCCACCTGACACAAAGCCTCTCACATTGGGA	10	+	47886998-47887047	10q11.22b	PREDICTED: Homo sapiens similar to Annexin A8 (Annexin VIII) (Vascular anticoagulant-beta) (VAC-beta), transcript variant 3 (LOC653107), mRNA.					
Homo sapiens	RefSeq	NM_007045.2	ILMN_2531	FGFR1OP	NM_007045.2	NM_007045.2		11116	36287087	NM_007045.2	FGFR1OP	NP_008976.1	ILMN_2411116	0002360255	A	1637	GTGGCTGCTGGTACGTGTGATCTTTGAAAACCTTGGCTTTAGCCCTCTGG	6	+	167373808-167373857	6q27c	Homo sapiens FGFR1 oncogene partner (FGFR1OP), transcript variant 1, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9949182] [evidence TAS]		FOP	FOP
Homo sapiens	RefSeq	NM_019088.2	ILMN_8199	PAF1	NM_019088.2	NM_019088.2		54623	42476168	NM_019088.2	PAF1	NP_061961.2	ILMN_1669508	0005310768	S	1774	CCCAGGGCATTCAGGGCTGGTTCAGACACCATTATTGTGAGCAGCAAAGC	19	-	44568418-44568467	19q13.2a	Homo sapiens Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) (PAF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		FLJ11123; F23149_1; PD2	FLJ11123; F23149_1; PD2
Homo sapiens	RefSeq	XM_927645.1	ILMN_30610	LOC644516	XM_927645.1	XM_927645.1		644516	89058399	XM_927645.1	LOC644516	XP_932738.1	ILMN_1767149	0000160523	S	362	GTGCACTAGGAAGGGCTGTGTTCGGCAAGCTGTATTCCTCCTTCCCTTAG					PREDICTED: Homo sapiens similar to TBC1 domain family, member 3 (LOC644516), mRNA.					
Homo sapiens	RefSeq	NM_005979.2	ILMN_9317	S100A13	NM_005979.2	NM_005979.2		6284	66737366	NM_005979.2	S100A13	NP_005970.1	ILMN_1738707	0005870577	I	50	AGGGACACTGGATGTCTTACCCCAAGCTGGGCCTTGCAGTACCTGTGGCT	1	-	153600616-153600665	1q21.3d	Homo sapiens S100 calcium binding protein A13 (S100A13), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8878558] [evidence TAS]		
Homo sapiens	RefSeq	NM_000901.1	ILMN_166092	NR3C2	NM_000901.1	NM_000901.1		4306	4505198	NM_000901.1	NR3C2	NP_000892.1	ILMN_2210934	0001010672	S	5391	GAATTCTGACTTACTTAACCAGGTTTGGGATGGAGATGGTCTGCATCAGC	4	-	149219673-149219722	4q31.23b	Homo sapiens nuclear receptor subfamily 3, group C, member 2 (NR3C2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 3037703] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 3037703] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [pmid 9662404] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11518808] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC133092; MR; MLR; MCR	MGC133092; MR; MLR; MCR
Homo sapiens	RefSeq	NM_031941.3	ILMN_8707	USHBP1	NM_031941.3	NM_031941.3		83878	71143107	NM_031941.3	USHBP1	NP_114147.2	ILMN_1693274	0002690382	S	1998	AGTGCCGAGCTGAACAGGGATTTATGCAAAGCCCACAGCGCCCTGGTCCT	19	-	17361211-17361223:17362391-17362427	19p13.11e	Homo sapiens Usher syndrome 1C binding protein 1 (USHBP1), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 11311560] [evidence IPI]	AIEBP; MCC2; FLJ90681; FLJ38709	AIEBP; MCC2; FLJ90681; FLJ38709
Homo sapiens	Unigene	Hs.570650	ILMN_122831	HS.570650	Hs.570650		Hs.570650		5395573	AI809007			ILMN_1859428	0000620309	S	549	CATTGTGTAACGTACAGTCTGTATGCTGCTGACTATTCGTCTCTGCTGGC	3	-	98950102-98950114:98950158-98950193:98950196-98950196		wf67f08.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2360679 3 similar to SW:EPA6_MOUSE Q62413 EPHRIN TYPE-A RECEPTOR 6 PRECURSOR ;, mRNA sequence					
Homo sapiens	RefSeq	NM_182639.1	ILMN_182536	HPS1	NM_000195.2	NM_000195.2		3257	33286415	NM_000195.2	HPS1	NP_000186.2	ILMN_1741483	0001570139	A	1136	CTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGCGATCAGAGCTCAGGT	10	-	100190979-100191028	10q24.2a	Homo sapiens Hermansky-Pudlak syndrome 1 (HPS1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8896559] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10625677] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10625677] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 10625677] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8896559] [evidence TAS]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 11836498] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [pmid 10625677] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [pmid 12663659] [evidence IPI]	HPS; MGC5277	HPS; MGC5277
Homo sapiens	RefSeq	XR_017979.2	ILMN_163905	TMEM148	XR_017979.2	XR_017979.2		197196	169210538	XR_017979.2	TMEM148		ILMN_3306972	0002650142	A	599	TCCCGTGTCCTCGCTGCGTCCTAACCAAATGCTGGACTGGCAGAGACTGA				16q24.1b	PREDICTED: Homo sapiens transmembrane protein 148 (TMEM148), miscRNA.					
Homo sapiens	RefSeq	XM_926060.1	ILMN_43745	LOC642574	XM_926060.1	XM_926060.1		642574	89028312	XM_926060.1	LOC642574	XP_931153.1	ILMN_1705329	0005130088	S	337	CGGGAGTACCTGGAGCAGATGGAGACGCCGCAGAAGGAGGTGGAGCAGCT	8	+	144925738-144925776:144926210-144926220	8q24.3g	PREDICTED: Homo sapiens similar to CG3104-PA, isoform A (LOC642574), mRNA.					
Homo sapiens	RefSeq	NM_001025447.1	ILMN_174382	LOC143188	XR_017867.1	XR_017867.1		143188	113421621	XR_017867.1	LOC143188		ILMN_1772739	0003800240	S	414	CAGAGAGTCTGCCTGCTGTGGGCCTCCAAAGAGTTCTGCCAGTTCTTCCC	10	+	114604730-114604779	10q25.2b	PREDICTED: Homo sapiens hypothetical protein LOC143188 (LOC143188), misc RNA.					
Homo sapiens	RefSeq	XM_001726164.1	ILMN_340567	LOC100131541	XM_001726164.1	XM_001726164.1		100131541	169203115	XM_001726164.1	LOC100131541	XP_001726216.1	ILMN_3205910	0002100491	A	737	CCAGGAGTTCCGGACCAGCATGGGCAACTTGGGGAAACCCCACCTCTAAA				11q21d	PREDICTED: Homo sapiens similar to MRSS6228 (LOC100131541), mRNA.					
Homo sapiens	RefSeq	NM_014519.2	ILMN_29715	ZNF232	NM_014519.2	NM_014519.2		7775	37574600	NM_014519.2	ZNF232	NP_055334.2	ILMN_1775085	0007320332	S	1452	TGCAGCAGAGAAATCCCAAAGCGGAGAGACTGAGGTGGTCCCCTGCCCAG	17	-	5009607-5009656	17p13.2b	Homo sapiens zinc finger protein 232 (ZNF232), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZSCAN11	ZSCAN11
Homo sapiens	RefSeq	NM_012181.3	ILMN_24468	FKBP8	NM_012181.3	NM_012181.3		23770	52630439	NM_012181.3	FKBP8	NP_036313.3	ILMN_1733947	0001430368	S	1526	TAGGAGGAAAGCCCAGAGGGAGGGGGCCCTCATTCCTTCAGACCCAGTTT	19	-	18642758-18642807	19p13.11c	Homo sapiens FK506 binding protein 8, 38kDa (FKBP8), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]	The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened [goid 7224] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10197430] [evidence TAS]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FKBP38; FKBPr38	FKBP38; FKBPr38
Homo sapiens	RefSeq	XM_925794.1	ILMN_183397	LOC729533	XM_001133363.1	XM_001133363.1		729533	113411622	XM_001133363.1	LOC729533	XP_001133363.1	ILMN_1780308	0003120324	S	993	GGGGGTAGGTGTAGAGTTTGAAATGGGCAGCTCCCTTATCTCTTGGAAGG	1	+	204300716-204300765	1q32.1g	PREDICTED: Homo sapiens similar to family with sequence similarity 72, member A, transcript variant 1 (LOC729533), mRNA.					
Homo sapiens	RefSeq	NM_005212.1	ILMN_13349	CSN3	NM_005212.2	NM_005212.2		1448	148491102	NM_005212.2	CSN3	NP_005203.2	ILMN_1792400	0001780091	S	524	GTCACTCCAGAAGCTTTTTCAGAGTCCATCATCACGAGCACCCCTGAGAC	4	+	71115093-71115142	4q13.3a	Homo sapiens casein kappa (CSN3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 1296818] [evidence ND ]	CSN10	CSN10
Homo sapiens	RefSeq	NM_145260.2	ILMN_5789	OSR1	NM_145260.2	NM_145260.2		130497	75677369	NM_145260.2	OSR1	NP_660303.1	ILMN_2197128	0003940500	S	1778	GCCAAGAGCCGGGCGTTATATTGCGATTGGCACTTTATGCTGACCATCGG	2	-	19551312-19551361	2p24.1d	Homo sapiens odd-skipped related 1 (Drosophila) (OSR1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the metanephros over time, from its formation to the mature structure. The metanephros is the excretory organ of the fetus which develops into the kidney and is formed from the rear portion of the nephrogenic cord [goid 1656] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of the gonad over time, from its formation to the mature structure. The gonad is an animal organ that produces gametes; in some species it also produces hormones [goid 8406] [evidence IEA]; The process whose specific outcome is the progression of the intermediate mesoderm over time, from its formation to the mature structure. The intermediate mesoderm is located between the lateral mesoderm and the paraxial mesoderm. It develops into the kidney and gonads [goid 48389] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ODD	ODD
Homo sapiens	RefSeq	NM_005570.2	ILMN_26805	LMAN1	NM_005570.2	NM_005570.2		3998	10862689	NM_005570.2	LMAN1	NP_005561.1	ILMN_1715814	0000830564	S	2430	AACCTGCCACTACATTCTGGTTTACATTAGTTACTTCATGCTGGCTGGGG	18	-	55148365-55148414	18q21.32a	Homo sapiens lectin, mannose-binding, 1 (LMAN1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 7876089] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 7876089] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7876089] [evidence TAS]; The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 30017] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the ER-Golgi intermediate compartment system [goid 33116] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9546392] [evidence TAS]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 9546392] [evidence TAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 9546392] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with mannose, a monosaccharide hexose, stereoisomeric with glucose, that occurs naturally only in polymerized forms called mannans [goid 5537] [pmid 7876089] [evidence TAS]; Interacting selectively with an unfolded protein [goid 51082] [pmid 9546392] [evidence TAS]	gp58; FMFD1; MR60; MCFD1; F5F8D; ERGIC53; ERGIC-53	gp58; FMFD1; MR60; MCFD1; F5F8D; ERGIC53; ERGIC-53
Homo sapiens	RefSeq	NR_001549.1	ILMN_9532	TTTY19	NR_001549.1	NR_001549.1		252952	32563551	NR_001549.1	TTTY19		ILMN_2099858	0007040653	S	193	CTGGAGGGGTGCTGCCTCACAAGATGCATCACCTGCTCAGTTGGGAACCA	Y	+	8573248-8573297	Yp11.2e	Homo sapiens testis-specific transcript, Y-linked 19 (non-protein coding) (TTTY19), non-coding RNA.					
Homo sapiens	RefSeq	NR_001549.1	ILMN_9532	TTTY19	NR_001549.1	NR_001549.1		252952	32563551	NR_001549.1	TTTY19		ILMN_2099855	0004290092	S	190	ACTCTGGAGGGGTGCTGCCTCACAAGATGCATCACCTGCTCAGTTGGGAA	Y	+	8573245-8573294	Yp11.2e	Homo sapiens testis-specific transcript, Y-linked 19 (non-protein coding) (TTTY19), non-coding RNA.					
Homo sapiens	RefSeq	NM_021161.3	ILMN_2122	KCNK10	NM_021161.3	NM_021161.3		54207	20143942	NM_021161.3	KCNK10	NP_066984.1	ILMN_1790885	0002350088	A	2373	CCTGGGCACACACGTAGACAAGGGCAGCTATTCCTTAGACCAGCCTCCTG	14	-	87721278-87721327	14q31.3d	Homo sapiens potassium channel, subfamily K, member 10 (KCNK10), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10880510] [evidence NAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [pmid 10880510] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	K2p10.1; TREK-2; TREK2	K2p10.1; TREK-2; TREK2
Homo sapiens	RefSeq	NM_021161.3	ILMN_2122	KCNK10	NM_021161.3	NM_021161.3		54207	20143942	NM_021161.3	KCNK10	NP_066984.1	ILMN_1695341	0002900605	I	378	CGCCTGAAGCAATAGCCATGGAAGTTGCGGCGGCACAGAGGGAGACAGAA	14	-	87862577-87862626	14q31.3d	Homo sapiens potassium channel, subfamily K, member 10 (KCNK10), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10880510] [evidence NAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [pmid 10880510] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	K2p10.1; TREK-2; TREK2	K2p10.1; TREK-2; TREK2
Homo sapiens	Unigene	Hs.437395	ILMN_91897	HS.437395	Hs.437395		Hs.437395		6087230	AW118646			ILMN_1851060	0005220743	S	140	CAATGACAGTCTTCAATTCCAGTTTTATCGGGGGCTGGGGCCGGGCAGGG	11	+	68228966-68229015		xd94h08.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2605311 3 similar to contains Alu repetitive element;, mRNA sequence					
Homo sapiens	RefSeq	XM_925903.1	ILMN_32263	FAM22A	XM_925903.2	XM_925903.2		283008	113421630	XM_925903.2	FAM22A	XP_930996.1	ILMN_1766660	0001980475	A	4423	AGCAACCTCTCTTTGGAAGCCTGTCCCCTGCTGAAAAGACACCCCACCGA	10	+	81600164-81600213	10q22.3f	PREDICTED: Homo sapiens family with sequence similarity 22, member A, transcript variant 1 (FAM22A), mRNA.					
Homo sapiens	RefSeq	NM_030567.2	ILMN_17178	PRR7	NM_030567.3	NM_030567.3		80758	141801884	NM_030567.3	PRR7	NP_085044.2	ILMN_1677509	0000060653	S	1259	ACGGAGCTTGGCGTCTGCCGGTCTCCATCCCCTTGTTCGGGAGGACTACA	5	+	176815670-176815719	5q35.3a	Homo sapiens proline rich 7 (synaptic) (PRR7), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]			MGC10772	MGC10772
Homo sapiens	RefSeq	XM_939789.1	ILMN_42178	GNAT3	XM_939789.1	XM_939789.1		346562	89026204	XM_939789.1	GNAT3	XP_944882.1	ILMN_1706176	0001470180	A	542	GTGCTGCACTTAGTGCCTATGACATGGTCCTCGTGGAAGACGAAGAAGTG				7q21.11c	PREDICTED: Homo sapiens guanine nucleotide binding protein, alpha transducing 3 (GNAT3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]		
Homo sapiens	Unigene	Hs.540472	ILMN_105171	HS.540472	Hs.540472		Hs.540472		5857983	AW009205			ILMN_1910319	0002000408	S	138	GCAACAGCGTGGGTGAACTCCAAAGACCAGATGCTGAGTGAAAGCAGCCG					ws79a03.x1 NCI_CGAP_Co3 Homo sapiens cDNA clone IMAGE:2504140 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000221.1	ILMN_8355	KHK	NM_000221.2	NM_000221.2		3795	153218446	NM_000221.2	KHK	NP_000212.1	ILMN_1678173	0005050022	I	762	ACCTACGCTACACAGTCTTTCAGACCACAGGCTCCGTCCCCATCGCCACG	2	+	27170884-27170933	2p23.3a	Homo sapiens ketohexokinase (fructokinase) (KHK), transcript variant a, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 1-phosphate [goid 4454] [pmid 7833921] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_000221.1	ILMN_8355	KHK	NM_000221.2	NM_000221.2		3795	153218446	NM_000221.2	KHK	NP_000212.1	ILMN_1706690	0000540164	A	2110	ATGTGACCCAGGATACAGAGTGTTGCTGTCCTCAGGGAGGTCCGATCTGG	2	+	27176818-27176867	2p23.3a	Homo sapiens ketohexokinase (fructokinase) (KHK), transcript variant a, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]	Catalysis of the reaction: ATP + D-fructose = ADP + D-fructose 1-phosphate [goid 4454] [pmid 7833921] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_001127194.1	ILMN_364190	CNBP	NM_001127194.1	NM_001127194.1		7555	187608737	NM_001127194.1	CNBP	NP_001120666.1	ILMN_3250201	0002630070	A	2805	GCCACTGTGCCCCACCTTTTCCTGGGTTTCATAAGGATCTGAAGTGGTGG	3	-	128887166-128887215	3q21.3c	Homo sapiens CCHC-type zinc finger, nucleic acid binding protein (CNBP), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 2562787] [evidence TAS]; The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [pmid 2562787] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2562787] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_012223.2	ILMN_13483	MYO1B	NM_012223.2	NM_012223.2		4430	44889480	NM_012223.2	MYO1B	NP_036355.2	ILMN_1797585	0001500669	S	4039	AGGCTTCAAGAAGGGCTGGTCCTAAGAGGGGGCAGAAATGAATGACCAGG	2	+	191997501-191997550	2q32.3a	Homo sapiens myosin IB (MYO1B), mRNA.	A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]; A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes [goid 16459] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	myr1	myr1
Homo sapiens	RefSeq	NM_000023.1	ILMN_26456	SGCA	NM_000023.1	NM_000023.1		6442	4506910	NM_000023.1	SGCA	NP_000014.1	ILMN_1741007	0002690088	S	1186	AGTGGTTCCAGGTCCAGCCCTGACTTCATCCTCCCTTCTCTGTCCACACC	17	+	45607808-45607809:45608072-45608119	17q21.33a	Homo sapiens sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) (SGCA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A multiprotein complex that forms a strong mechanical link between the cytoskeleton and extracellular matrix; typical of, but not confined to, muscle cells. The complex is composed of transmembrane, cytoplasmic, and extracellular proteins, including dystrophin, sarcoglycans, dystroglycan, dystrobrevins, syntrophins, sarcospan, caveolin-3, and NO synthase [goid 16010] [pmid 7937874] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8069911] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 7663524] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DAG2; A2; LGMD2D; DMDA2; ADL; SCARMD1; 50-DAG; adhalin	DAG2; A2; LGMD2D; DMDA2; ADL; SCARMD1; 50-DAG; adhalin
Homo sapiens	RefSeq	XM_940753.1	ILMN_35577	LOC651580	XM_940753.1	XM_940753.1		651580	88979686	XM_940753.1	LOC651580	XP_945846.1	ILMN_1656993	0000770170	S	417	GGGTGCCCGGAATTATTTGCCCCCACGTTTAGTGAATCCACGGAGCCCAG					PREDICTED: Homo sapiens similar to calmodulin regulated spectrin-associated protein 1-like 1 (LOC651580), mRNA.					
Homo sapiens	RefSeq	NM_016930.2	ILMN_1325	STX18	NM_016930.2	NM_016930.2		53407	39725935	NM_016930.2	STX18	NP_058626.1	ILMN_1696126	0006560630	S	1747	CTCAGTGAGGGGCTGCCTGGCATTACTCCTCCAAAGACTGCTGCCCCCAG	4	-	4472277-4472326	4p16.2b-p16.2a	Homo sapiens syntaxin 18 (STX18), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10788491] [evidence TAS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 10788491] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion [goid 5484] [evidence IEA]	DKFZp686O15149; Ufe1	DKFZp686O15149; Ufe1
Homo sapiens	RefSeq	NM_016223.3	ILMN_1643	PACSIN3	NM_016223.3	NM_016223.3		29763	34147484	NM_016223.3	PACSIN3	NP_057307.2	ILMN_1682957	0006110487	S	1628	GTCTAGGCTGAGGGCAAGATGGGAGGTCAGAGGTGACAGAAGCGTTCAGG	11	-	47199241-47199290	11p11.2b	Homo sapiens protein kinase C and casein kinase substrate in neurons 3 (PACSIN3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of endocytosis [goid 45806] [evidence ISS]	Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence ISS]; Interacting selectively with any enzyme [goid 19899] [pmid 10531379] [evidence IPI]	SDPIII	SDPIII
Homo sapiens	RefSeq	XM_938134.1	ILMN_46716	C11ORF34	XM_938130.2	XM_938130.2		349633	113423113	XM_938130.2	C11orf34	XP_943223.1	ILMN_1680963	0005570273	S	410	TGTCTAGGGTTATGGTGTAGTATTCATCAAAGGTGAAGCAGGTGCTACTG				11q23.1c	PREDICTED: Homo sapiens chromosome 11 open reading frame 34 (C11orf34), mRNA.					
Homo sapiens	RefSeq	XM_927535.1	ILMN_46716	C11ORF34	XM_938130.2	XM_938130.2		349633	113423113	XM_938130.2	C11orf34	XP_943223.1	ILMN_1799053	0005700521	A	814	GGCCAACCAAGTCTTCAGCAGCCCCATCACAGAGGCCATTTATATCCTGC				11q23.1c	PREDICTED: Homo sapiens chromosome 11 open reading frame 34 (C11orf34), mRNA.					
Homo sapiens	RefSeq	NM_030642.1	ILMN_9498	APOL5	NM_030642.1	NM_030642.1		80831	13470093	NM_030642.1	APOL5	NP_085145.1	ILMN_1676177	0006450301	A	1114	GTTAAACCAGAAGGGTCTCGCTCACCTCTCCCCTGGCCTGTTGTGGAGCA	22	+	34453175-34453187:34454716-34454752	22q12.3c	Homo sapiens apolipoprotein L, 5 (APOL5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 11374903] [evidence NAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]; The chemical reactions and pathways involving any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 42157] [evidence IEA]	Interacting selectively with high-density lipoprotein: one of the classes of lipoproteins found in blood plasma in many animals (data normally relate to humans) [goid 8035] [pmid 11374903] [evidence NAS]; Interacting selectively with a lipid [goid 8289] [evidence IEA]	APOL-V	APOL-V
Homo sapiens	RefSeq	XM_944437.1	ILMN_44888	LOC645485	XM_944437.2	XM_944437.2		645485	113423706	XM_944437.2	LOC645485	XP_949530.2	ILMN_1672962	0001470279	S	1702	TCTGCCAAACAGCCACTTGAAAGCTACCTGTTAGAAAGCAATGTGCTTGG				12p11.21b	PREDICTED: Homo sapiens hypothetical LOC645485 (LOC645485), mRNA.					
Homo sapiens	RefSeq	XM_927011.1	ILMN_138533	LOC642987	XM_927011.1	XM_927011.1		642987	88984794	XM_927011.1	LOC642987	XP_932104.1	ILMN_1671169	0007040474	I	335	ACAGAGATTTCCACTTGAGTCATGACTCATGCCATCTTCCCCTCAAGTGC	5	-	110084133-110084182	5q22.1a	PREDICTED: Homo sapiens hypothetical protein LOC642986, transcript variant 1 (LOC642987), mRNA.					
Homo sapiens	RefSeq	XR_038496.1	ILMN_345239	LOC727951	XR_038496.1	XR_038496.1		727951	169167267	XR_038496.1	LOC727951		ILMN_3243866	0004760022	S	794	GGTCGCCAGTACCAAAGGAACCCAAATTGCATCTGATGGTCTCAAGCGTC				4p16.2b	PREDICTED: Homo sapiens misc_RNA (LOC727951), miscRNA.					
Homo sapiens	RefSeq	NM_012426.3	ILMN_18316	SF3B3	NM_012426.3	NM_012426.3		23450	54112120	NM_012426.3	SF3B3	NP_036558.3	ILMN_1803110	0001090239	S	4216	GTACAATGTTATCTCTGTGGGAGGAAGGAGGCAGGCTGTGGTGGGACTGG	16	+	69163578-69163627	16q22.1f	Homo sapiens splicing factor 3b, subunit 3, 130kDa (SF3B3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 10490618] [evidence TAS]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 10490618] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 10490618] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 10490618] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12029088] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 10490618] [evidence TAS]	SAP130; KIAA0017; RSE1; STAF130; SF3b130	SAP130; KIAA0017; RSE1; STAF130; SF3b130
Homo sapiens	RefSeq	NM_207404.2	ILMN_23251	ZNF662	NM_207404.2	NM_207404.2		389114	46559762	NM_207404.2	ZNF662	NP_997287.2	ILMN_1692340	0006290035	S	3558	CCCCTTGGCCACAGAGCCATTGTGATATGAGGAGATACTGGCTCTTCTGG	3	+	42933775-42933824	3p22.1a	Homo sapiens zinc finger protein 662 (ZNF662), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ45880; MGC149141	FLJ45880; MGC149141
Homo sapiens	RefSeq	NM_024814.1	ILMN_24021	CBLL1	NM_024814.1	NM_024814.1		79872	13376203	NM_024814.1	CBLL1	NP_079090.1	ILMN_2073732	0004070608	S	1724	CATCTCTTTGTTCCCCTAGTTTAGTAAATTGACCCAGAGGTGACCATTTG	7	+	107187084-107187133	7q22.3c	Homo sapiens Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 (CBLL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HAKAI; FLJ23109; MGC163403; RNF188; MGC163401	HAKAI; FLJ23109; MGC163403; RNF188; MGC163401
Homo sapiens	RefSeq	NM_024814.1	ILMN_24021	CBLL1	NM_024814.1	NM_024814.1		79872	13376203	NM_024814.1	CBLL1	NP_079090.1	ILMN_1705433	0001690180	S	1417	GATTGCAGGGTCCGCCTTCTCAAACCCCACTTCCTGGACCACATCATCCA	7	+	107186777-107186826	7q22.3c	Homo sapiens Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 (CBLL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HAKAI; FLJ23109; MGC163403; RNF188; MGC163401	HAKAI; FLJ23109; MGC163403; RNF188; MGC163401
Homo sapiens	RefSeq	XM_931486.1	ILMN_38407	LOC643322	XM_931486.1	XM_931486.1		643322	89040392	XM_931486.1	LOC643322	XP_936579.1	ILMN_1717494	0000510711	S	746	AGAAACAGCCCCAAGGAACTGACTCGCGGCCCCAGGAAAGCCTCCAGAGA	16	+	48431045-48431094		PREDICTED: Homo sapiens hypothetical protein LOC643322 (LOC643322), mRNA.					
Homo sapiens	RefSeq	XR_038548.1	ILMN_336658	LOC100131463	XR_038548.1	XR_038548.1		100131463	169216302	XR_038548.1	LOC100131463		ILMN_3201138	0003800609	A	115	CCGCTGGTGCATGCGGGACCCTTTTTATTGCGTACTGCATCTACTTTGAC					PREDICTED: Homo sapiens misc_RNA (LOC100131463), miscRNA.					
Homo sapiens	RefSeq	NM_020972.1	ILMN_16024	ZFYVE28	NM_020972.1	NM_020972.1		57732	55741863	NM_020972.1	ZFYVE28	NP_066023.1	ILMN_1763267	0001170471	S	3773	TCTGCACCCTCTGGAACCCTGGCCCAATTCCTCAGACCCCAGAGTGGCCT	4	-	2276731-2276780	4p16.3b-p16.3a	Homo sapiens zinc finger, FYVE domain containing 28 (ZFYVE28), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC61592; MGC43699	MGC61592; MGC43699
Homo sapiens	RefSeq	NM_001039083.1	ILMN_19721	LOC641522	NM_001039083.1	NM_001039083.1		641522	84872131	NM_001039083.1	LOC641522	NP_001034172.1	ILMN_2141030	0004050603	S	725	TCTGGGATTATAGGCGTGAGCCACCGTGTCCGGCCTGCGTTATTACTTTT	17	-	41785060-41785109	17q21.31e	Homo sapiens ADP-ribosylation factor-like protein (LOC641522), mRNA.					
Homo sapiens	RefSeq	NM_018590.3	ILMN_11419	CSGALNACT2	NM_018590.3	NM_018590.3		55454	24429591	NM_018590.3	CSGALNACT2	NP_061060.3	ILMN_1799208	0001980092	S	1370	TGGACGAGGACTAAATGTGGGTGCCCGAGCTTGGGACAAGGGAGAGGTCT	10	+	42979374-42979423	10q11.21a	Homo sapiens chondroitin sulfate N-acetylgalactosaminyltransferase 2 (CSGALNACT2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 11788602] [evidence NAS]	The elongation of dermatan sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of dermatan sulfate [goid 50652] [pmid 11788602] [evidence TAS]; The elongation of chondroitin sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of chondroitin sulfate [goid 50653] [pmid 11788602] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11788602] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP-N-acetylgalactosamine = N-acetyl-D-galactosaminyl-1,4-beta-D-glucuronyl-1,3-beta-D-galactosylproteoglycan + UDP [goid 47237] [evidence IEA]	FLJ43310; MGC40204; CSGalNAcT-2; GALNACT-2; GALNACT2; DKFZp686H13226; PRO0082	FLJ43310; MGC40204; CSGalNAcT-2; GALNACT-2; GALNACT2; DKFZp686H13226; PRO0082
Homo sapiens	RefSeq	NM_030944.1	ILMN_176488	C15ORF5	XR_017977.1	XR_017977.1		81698	113425706	XR_017977.1	C15orf5		ILMN_1691501	0002260064	S	1410	CCAAAGGGACAGATTTTGACAGCAGTCTTCATTGTTGTTCCATATGAGTG				15q24.3b	PREDICTED: Homo sapiens chromosome 15 open reading frame 5 (C15orf5), misc RNA.					MGC120148; MGC120146; MGC120149
Homo sapiens	RefSeq	XR_036974.1	ILMN_346792	LOC100133972	XR_036974.1	XR_036974.1		100133972	169178751	XR_036974.1	LOC100133972		ILMN_3245038	0005670273	S	549	GATGCTCCAGCTGTGTCTCTTCGCCATCACGGACCGGGAGAAAAACCCAG					PREDICTED: Homo sapiens misc_RNA (LOC100133972), miscRNA.					
Homo sapiens	RefSeq	XM_926729.2	ILMN_31044	LOC643395	XM_926729.2	XM_926729.2		643395	169177306	XM_926729.2	LOC643395	XP_931822.2	ILMN_3248320	0006290170	S	850	CCCTGGAGCGGCCCCGACGTCTCTTCGGAGGAGAAGAGGGGCGGGAGTCA	9	-	45246073-45246122	9p11.2b	PREDICTED: Homo sapiens similar to LOC339742 protein (LOC643395), mRNA.					
Homo sapiens	RefSeq	NM_003382.3	ILMN_2935	VIPR2	NM_003382.3	NM_003382.3		7434	33188464	NM_003382.3	VIPR2	NP_003373.2	ILMN_1683939	0000060600	S	3648	CAGGCACTGGTTGTTGATGGTCGGTGGTTGGGTGTGGGCAGTCATCAGTC	7	-	158513873-158513922	7q36.3e	Homo sapiens vasoactive intestinal peptide receptor 2 (VIPR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7811244] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7811244] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7811244] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8757618] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 7811244] [evidence TAS];  [goid 4999] [evidence IEA]	VPAC2; FLJ16511; VPCAP2R	VPAC2; FLJ16511; VPCAP2R
Homo sapiens	RefSeq	XM_936696.1	ILMN_46110	C1ORF170	XM_936696.1	XM_936696.1		84808	88944464	XM_936696.1	C1orf170	XP_941789.1	ILMN_1765430	0002710563	I	408	TGCAGAAAGGGATGCAGGGGACGTGGTATTTTTGGCACAGGGGGAGGAGC				1p36.33b	PREDICTED: Homo sapiens chromosome 1 open reading frame 170 (C1orf170), mRNA.					
Homo sapiens	RefSeq	XM_926351.1	ILMN_32275	LOC642966	XM_926351.1	XM_926351.1		642966	89041147	XM_926351.1	LOC642966	XP_931444.1	ILMN_1661598	0004570246	S	162	CTCCAGCATCCACCTCAATGGGCAGCTGCTGCTTGTGGGGGCCACCTTCA	17	+	3161606-3161655		PREDICTED: Homo sapiens similar to olfactory receptor 139 (LOC642966), mRNA.					
Homo sapiens	RefSeq	NM_022161.2	ILMN_21032	BIRC7	NM_022161.2	NM_022161.2		79444	21536419	NM_022161.2	BIRC7	NP_071444.1	ILMN_2338849	0002690441	A	436	AGTTGCGTCTGGCCTCCTTCTATGACTGGCCGCTGACTGCTGAGGTGCCA	20	+	61338156-61338205	20q13.33d	Homo sapiens baculoviral IAP repeat-containing 7 (BIRC7), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 11024045] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11162435] [evidence NAS]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 11865055] [evidence NAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 11801603] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LIVIN; ML-IAP; MLIAP; RNF50; KIAP	LIVIN; ML-IAP; MLIAP; RNF50; KIAP
Homo sapiens	RefSeq	NM_139317.1	ILMN_21032	BIRC7	NM_022161.2	NM_022161.2		79444	21536419	NM_022161.2	BIRC7	NP_071444.1	ILMN_1674036	0003450347	A	1075	TGTTCTGGACTGTGTTCTGGGCCTGCTGAGGATGGCAGAGCTGGTGTCCA	20	+	61342106-61342155	20q13.33d	Homo sapiens baculoviral IAP repeat-containing 7 (BIRC7), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments [goid 6309] [pmid 11024045] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 11162435] [evidence NAS]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [pmid 11865055] [evidence NAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 11801603] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LIVIN; ML-IAP; MLIAP; RNF50; KIAP	LIVIN; ML-IAP; MLIAP; RNF50; KIAP
Homo sapiens	RefSeq	NR_030328.1	ILMN_388054	MIR598	NR_030328.1	NR_030328.1		693183	262205981	NR_030328.1	MIR598		ILMN_3310568	0001470142	S	38	GTGTGAGCTGGAAATGGGGTGCTACGTCATCGTTGTCATCGTCATCATCA				8p23.1b	Homo sapiens microRNA 598 (MIR598), microRNA.					
Homo sapiens	RefSeq	XM_372543.2	ILMN_19211	LOC390530	XM_372543.2	XM_372543.2		390530	51475308	XM_372543.2	LOC390530	XP_372543.2	ILMN_1780711	0003800202	S	3	GGACTGGAATTGGAGGATCCTGTTTTTGGTGGTCATAGCTGCGGGTGCCC	21	+	9884495-9884538:9884622-9884627	21p11.2a	PREDICTED: Homo sapiens similar to Ig heavy chain V-I region HG3 precursor (LOC390530), mRNA.					
Homo sapiens	RefSeq	NM_015969.2	ILMN_26133	MRPS17	NM_015969.2	NM_015969.2		51373	16554613	NM_015969.2	MRPS17	NP_057053.1	ILMN_1804851	0002690400	S	345	CCTGGAGAGTCCGTTGAGTTCGGAAACCACCCAGCTAAGCAAAAATCTGG	7	+	55990287-55990336	7p11.2b	Homo sapiens mitochondrial ribosomal protein S17 (MRPS17), nuclear gene encoding mitochondrial protein, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The smaller of the two subunits of a mitochondrial ribosome [goid 5763] [pmid 11279123] [evidence NAS]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 11279123] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 11279123] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]	RPMS17; HSPC011; MRP-S17	RPMS17; HSPC011; MRP-S17
Homo sapiens	RefSeq	NM_001029881.1	ILMN_5078	CIB4	NM_001029881.1	NM_001029881.1		130106	71274155	NM_001029881.1	CIB4	NP_001025052.1	ILMN_1707713	0004180427	S	407	CCTGCGACTGCTGAACAGTGATGACATGTCTGAGGACCTCCTGATGGACC	2	-	26806667-26806716	2p23.3b	Homo sapiens calcium and integrin binding family member 4 (CIB4), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	Unigene	Hs.97337	ILMN_74321	HS.97337	Hs.97337		Hs.97337		51586999	CR738086			ILMN_1855058	0003370626	S	143	GCTGCAGAAAGCCACCTCACTCAAGTTCACATTCTTCCCAGAGCAGCCTG	3	-	25871324-25871373		CR738086 Soares_testis_NHT Homo sapiens cDNA clone IMAGp971D1644 ; IMAGE:728562 5, mRNA sequence					
Homo sapiens	RefSeq	NM_006400.3	ILMN_11887	DCTN2	NM_006400.3	NM_006400.3		10540	34335254	NM_006400.3	DCTN2	NP_006391.1	ILMN_1662232	0005820050	S	1591	GGCCCAGCCACATGCCAACTCATGTCCAATACTGCTTTGCCTGGTGTGGG	12	-	57924184-57924233	12q13.3b	Homo sapiens dynactin 2 (p50) (DCTN2), mRNA.	A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 8647893] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 8647893] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [pmid 8647893] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 8647893] [evidence IMP]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8647893] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate [goid 3774] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10226031] [evidence IPI]	DCTN50; RBP50; DYNAMITIN	DCTN50; RBP50; DYNAMITIN
Homo sapiens	RefSeq	NM_173695.1	ILMN_176055	CXORF59	NM_173695.1	NM_173695.1		286464	27734890	NM_173695.1	CXorf59	NP_775966.1	ILMN_1714718	0001990347	S	1765	CCTCAGAATGGGGCCTGCACTGTAGCTTCCCTGGTTTGGGGGATTTGGGA	X	+	36072789-36072838	Xp21.1b	Homo sapiens chromosome X open reading frame 59 (CXorf59), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RP13-11B7.1; MGC126747; FLJ36601; MGC126749	RP13-11B7.1; FLJ36601; MGC126747; MGC126749
Homo sapiens	RefSeq	NM_183386.1	ILMN_24229	ACOT8	NM_005469.2	NM_005469.2		10005	34577074	NM_005469.2	ACOT8	NP_005460.2	ILMN_1679600	0002900291	A	615	TGCTGCTCAGGAGGTCCCCATTGAGATCAAGCCAGTAAACCCATCCCCCC	20	-	44472964-44473013	20q13.12b	Homo sapiens acyl-CoA thioesterase 8 (ACOT8), transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 10092594] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10092594] [evidence TAS]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules [goid 7031] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IEA]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9153233] [evidence IPI]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [pmid 10092594] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: choloyl-CoA + H2O = cholate + CoA [goid 33882] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IEA]; Catalysis of the reaction: acyl-CoA + H2O = corresponding fatty acid + CoA [goid 16291] [evidence IEA]	PTE1; hTE; HNAACTE; PTE-2; PTE2; hACTE-III	PTE1; hTE; HNAACTE; PTE-2; PTE2; hACTE-III
Homo sapiens	RefSeq	NM_015141.2	ILMN_20489	GPD1L	NM_015141.2	NM_015141.2		23171	34222096	NM_015141.2	GPD1L	NP_055956.1	ILMN_1694106	0002450187	S	3744	ATCCACACCAAGAGGGTGTTGTGATGAGGTGCCGGTGTGCAAAGGGAACT	3	+	32184469-32184518	3p22.3c	Homo sapiens glycerol-3-phosphate dehydrogenase 1-like (GPD1L), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate [goid 9331] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 46168] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: sn-glycerol 3-phosphate + NAD+ = glycerone phosphate + NADH + H+ [goid 4367] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	KIAA0089	KIAA0089
Homo sapiens	RefSeq	NM_175619.1	ILMN_29665	ZAR1	NM_175619.1	NM_175619.1		326340	28269686	NM_175619.1	ZAR1	NP_783318.1	ILMN_1798807	0007550475	S	931	CCGGAGCTGGGCAAGGAGCGGCTGCGCTTCCAGTTCTTAGAGCAGAAATA	4	+	48187996-48188028:48189540-48189556	4p12a	Homo sapiens zygote arrest 1 (ZAR1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]			
Homo sapiens	RefSeq	NM_203373.1	ILMN_27711	FBXL22	NM_203373.1	NM_203373.1		283807	42794272	NM_203373.1	FBXL22	NP_976307.1	ILMN_2199362	0004040575	S	1127	TGTTCACACTCCGGCTCCACCCAGCGCCAGCTGCGACAAAGCCCTTTACC	15	+	61681325-61681374	15q22.31a	Homo sapiens F-box and leucine-rich repeat protein 22 (FBXL22), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		Fbl22; MGC75496; FLJ39626	Fbl22; MGC75496; FLJ39626
Homo sapiens	RefSeq	NM_000434.2	ILMN_23298	NEU1	NM_000434.2	NM_000434.2		4758	40806202	NM_000434.2	NEU1	NP_000425.1	ILMN_1763144	0004200692	S	1537	CTTTAGGACTGAAAGCTAGGCGTCCTCTCCCACAAAAAAGTCCTGCCCTC	6	-	31935266-31935315	6p21.32b	Homo sapiens sialidase 1 (lysosomal sialidase) (NEU1), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The volume enclosed within the lysosomal membrane [goid 43202] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates [goid 4308] [pmid 8985184] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16314420] [evidence IPI]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	NEU; SIAL1	NEU; SIAL1
Homo sapiens	RefSeq	XM_939144.1	ILMN_40371	LOC650058	XM_939144.1	XM_939144.1		650058	88989505	XM_939144.1	LOC650058	XP_944237.1	ILMN_1673147	0007200538	S	1	ATGTATGCCATCGACCTCATGCTGAAGTGGGACAACCGTCCAGATGGAAA					PREDICTED: Homo sapiens similar to CG1550-PA (LOC650058), mRNA.					
Homo sapiens	RefSeq	XM_938040.1	ILMN_33251	LOC401399	XM_379517.4	XM_379517.4		401399	113418785	XM_379517.4	LOC401399	XP_379517.4	ILMN_1738009	0004920608	S	272	AGATACCACGAAGCGTTGCCCAGCTGGGCGCCAGGGCCGCCACGACCGCC	7	-	127788650-127788699	7q32.1a	PREDICTED: Homo sapiens hypothetical LOC401399 (LOC401399), mRNA.					
Homo sapiens	RefSeq	NM_001031806.1	ILMN_15293	ALDH3A2	NM_001031806.1	NM_001031806.1		224	73466519	NM_001031806.1	ALDH3A2	NP_001026976.1	ILMN_2401641	0003120196	A	3361	GCAGTTCTATGCCTTGGAGCTCCTGACTGCAGGGACTCTGTCCCCACACT	17	+	19521034-19521083	17p11.2d	Homo sapiens aldehyde dehydrogenase 3 family, member A2 (ALDH3A2), transcript variant 1, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8528251] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8528251] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [pmid 8528251] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 8528251] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [pmid 8528251] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DKFZp686E23276; FALDH; ALDH10; FLJ20851; SLS	DKFZp686E23276; FALDH; ALDH10; FLJ20851; SLS
Homo sapiens	RefSeq	NM_001031806.1	ILMN_15293	ALDH3A2	NM_001031806.1	NM_001031806.1		224	73466519	NM_001031806.1	ALDH3A2	NP_001026976.1	ILMN_1667564	0000460746	I	1724	GCGTTGGTCCAGTAAGCAGAGATGAACACCAGATTTCAAAACCCAGCCCT	17	+	19517115-19517139:19517140-19517164	17p11.2d	Homo sapiens aldehyde dehydrogenase 3 family, member A2 (ALDH3A2), transcript variant 1, mRNA.	The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8528251] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 8528251] [evidence TAS]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [pmid 8528251] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 8528251] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 3-chloroallyl aldehyde + H2O = 2 H+ + 2 e- + 3-chloroacrylic acid [goid 4028] [pmid 8528251] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence IEA]; Catalysis of the reaction: an aldehyde + NAD(P)+ + H2O = an acid + NAD(P)H + H+ [goid 4030] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DKFZp686E23276; FALDH; ALDH10; FLJ20851; SLS	DKFZp686E23276; FALDH; ALDH10; FLJ20851; SLS
Homo sapiens	RefSeq	XR_038911.1	ILMN_352790	LOC391670	XR_038911.1	XR_038911.1		391670	169167014	XR_038911.1	LOC391670		ILMN_3219808	0006060259	A	542	GCAAGAGATGGCTAGTGCTTCCTCCAGCCAGAGGTTGAAGTGGATCTGGA				4q21.1c	PREDICTED: Homo sapiens misc_RNA (LOC391670), miscRNA.					
Homo sapiens	RefSeq	XM_935510.1	ILMN_34842	LOC641744	XM_935510.1	XM_935510.1		641744	89027006	XM_935510.1	LOC641744	XP_940603.1	ILMN_1664008	0001690020	S	121	TCCATCCTCGTCACCGAGGTGGGGCTCGGCGACGAGGGCCTCTACACCTG					PREDICTED: Homo sapiens similar to opioid binding protein/cell adhesion molecule-like (LOC641744), mRNA.					
Homo sapiens	RefSeq	NR_024330.1	ILMN_371854	NCRNA00085	NR_024330.1	NR_024330.1		147650	210147553	NR_024330.1	NCRNA00085		ILMN_3247848	0002350156	S	1835	GCATCAGCGAGTGCGACAGTGTTGGCGTGGATGTTCTTTCGATGGTACTG	19	+	52207705-52207733:52208343-52208363	19q13.33e	Homo sapiens non-protein coding RNA 85 (NCRNA00085), non-coding RNA.					
Homo sapiens	RefSeq	XM_051017.5	ILMN_309077	OBSL1	NM_015311.1	NM_015311.1		23363	144226846	NM_015311.1	OBSL1	NP_056126.1	ILMN_1732408	0006620246	A	5612	ATAAGTATGAGATGCGCAGCCACGGCCCCACCCACAGCCTGGTCATCCAT	2	-	220416329-220416378	2q35f	Homo sapiens obscurin-like 1 (OBSL1), mRNA.	Specialised type of cell-cell junction in cardiac muscle, which mediates mechanical and electrochemical integration between the individual cardiomyocytes. Consist of three different kinds of substructures: adherens junctions, desmosomes and gap junctions [goid 14704] [pmid 17289344] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 17289344] [evidence TAS]; The midline of aligned thick filaments in a sarcomere; location of specific proteins that link thick filaments. Depending on muscle type the M band consists of different numbers of M lines [goid 31430] [pmid 17289344] [evidence TAS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 17289344] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 17289344] [evidence NAS]; The process whose specific outcome is the progression of the cardiac myofibril over time, from its formation to the mature structure. A cardiac myofibril is a myofibril specific to cardiac muscle cells [goid 55003] [pmid 17289344] [evidence IEP]	The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 17289344] [evidence NAS]	MGC71026; KIAA0657	
Homo sapiens	RefSeq	XM_001721744.1	ILMN_338210	LOC100132521	XM_001721744.1	XM_001721744.1		100132521	169206895	XM_001721744.1	LOC100132521	XP_001721796.1	ILMN_3279575	0001450541	M	92	TAGCCTTTGCCTTTTCGAGCTTGGTGATGCGAGCCACAGACTTGGGACCC	14	+	34774157-34774206	14q13.2a	PREDICTED: Homo sapiens similar to PRO1477 (LOC100132521), mRNA.					
Homo sapiens	RefSeq	NM_014585.3	ILMN_27440	SLC40A1	NM_014585.4	NM_014585.4		30061	142387698	NM_014585.4	SLC40A1	NP_055400.1	ILMN_1761833	0005490601	S	2882	TGGTCATAGAACCTAGAAGCCAAAAGCCACACAGAAGGGCAAGAATCCCA	2	-	190134060-190134109	2q32.2a	Homo sapiens solute carrier family 40 (iron-regulated transporter), member 1 (SLC40A1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10747949] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10693807] [evidence TAS]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [pmid 10693807] [evidence TAS]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [pmid 10747949] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10693807] [evidence TAS]	Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [pmid 10747949] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]	IREG1; HFE4; MST079; FPN1; MTP1; MSTP079; SLC11A3	IREG1; HFE4; MST079; FPN1; MTP1; MSTP079; SLC11A3
Homo sapiens	Unigene	Hs.544233	ILMN_107684	HS.544233	Hs.544233		Hs.544233		1354452	U52830			ILMN_1866840	0006770196	S	180	CTGCCAAGAGGGGGAGCTAGATAGTGCCAGCAAGTTGGAGGAAAAAGGAG	5	-	10254730-10254779		Homo sapiens Cri-du-chat region mRNA, clone CSC8					
Homo sapiens	RefSeq	NM_030775.2	ILMN_4675	WNT5B	NM_030775.2	NM_030775.2		81029	17402918	NM_030775.2	WNT5B	NP_110402.2	ILMN_1661788	0007160279	I	33	AGCAGAAGGTTGACAGCTTCAGTAAGATCTCAAGAGAGCGAGAAGACTGG	12	+	1596515-1596564	12p13.33b	Homo sapiens wingless-type MMTV integration site family, member 5B (WNT5B), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC2648	MGC2648
Homo sapiens	RefSeq	XM_941693.1	ILMN_309178	TMEM181	NM_020823.1	NM_020823.1		57583	153792041	NM_020823.1	TMEM181	NP_065874.1	ILMN_1710078	0005670181	A	5213	AGGAGAGATAGAGCCATGTGTTCAGTTGTGGACCTGTCCGTGGGGCACAG	6	+	158975841-158975890	6q25.3d	Homo sapiens transmembrane protein 181 (TMEM181), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA1423; GPR178	
Homo sapiens	RefSeq	NM_024540.2	ILMN_29241	MRPL24	NM_145729.1	NM_145729.1		79590	22035589	NM_145729.1	MRPL24	NP_663781.1	ILMN_1695576	0007610747	A	669	TGGCATCGTCCCTGAAACGTGGATTGATGGCCCCAAAGACACATCAGTGG	1	-	154973926-154973950:154974062-154974086	1q23.1a	Homo sapiens mitochondrial ribosomal protein L24 (MRPL24), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	FLJ20917; MRP-L18; MGC22737; MGC9831	FLJ20917; MRP-L18; MGC22737; MGC9831
Homo sapiens	RefSeq	XM_001714670.1	ILMN_342500	ZNF716	XM_001714670.1	XM_001714670.1		441234	169171753	XM_001714670.1	ZNF716	XP_001714722.1	ILMN_3301478	0005900176	M	991	ACCCTACACTTGTGAAGAATGTGGCAAAGCCTTTAGCTTACCCTCAACCT				7p11.1b	PREDICTED: Homo sapiens zinc finger protein 716 (ZNF716), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_004640.4	ILMN_17823	BAT1	NM_080598.4	NM_080598.4		7919	93588180	NM_080598.4	BAT1	NP_542165.1	ILMN_1686626	0000160132	A	1774	GAACAGACACGGTAGAAGACTCGCCCATTTTGGAATGTGACCGTCTGTCC	6	-	31606154-31606189:31606190-31606203	6p21.33a	Homo sapiens HLA-B associated transcript 1 (BAT1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7601445] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 15047853] [evidence IGI]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 15047853] [evidence IGI]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 7601445] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14667819] [evidence IPI]	UAP56; DDX39B; D6S81E	D6S81E
Homo sapiens	RefSeq	NM_080598.4	ILMN_17823	BAT1	NM_080598.4	NM_080598.4		7919	93588180	NM_080598.4	BAT1	NP_542165.1	ILMN_2357976	0002320136	A	1821	TCCTTCAGGAGAGGACACCAGGGTGGGGGTGAAGGAGACACTACTGCCCC	6	-	31606107-31606156	6p21.33a	Homo sapiens HLA-B associated transcript 1 (BAT1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7601445] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 15047853] [evidence IGI]; The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 15047853] [evidence IGI]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 7601445] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14667819] [evidence IPI]	UAP56; DDX39B; D6S81E	UAP56; DDX39B; D6S81E
Homo sapiens	RefSeq	NM_021633.2	ILMN_165002	KLHL12	NM_021633.2	NM_021633.2		59349	21361889	NM_021633.2	KLHL12	NP_067646.1	ILMN_2164081	0006660152	S	2948	GCACATGTCTGCCAAGGAGTGGTTTGTACTGCTGTGTTTGGTACATCTAG	1	-	202860570-202860619	1q32.1d	Homo sapiens kelch-like 12 (Drosophila) (KLHL12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	C3IP1; FLJ27152; DKIR	DKIR; C3IP1; FLJ27152
Homo sapiens	RefSeq	NM_021633.2	ILMN_165002	KLHL12	NM_021633.2	NM_021633.2		59349	21361889	NM_021633.2	KLHL12	NP_067646.1	ILMN_1676075	0006840500	S	2770	ACCTGCCAGGGCTCATCTAGCCATGGCAATGTTTGCCTTGAATGGGGGTG	1	-	202860748-202860797	1q32.1d	Homo sapiens kelch-like 12 (Drosophila) (KLHL12), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	C3IP1; FLJ27152; DKIR	DKIR; C3IP1; FLJ27152
Homo sapiens	RefSeq	XM_931698.1	ILMN_167537	LOC728395	XM_001126990.1	XM_001126990.1		728395	113430693	XM_001126990.1	LOC728395	XP_001126990.1	ILMN_1658315	0000050291	A	859	CTTCGCAGGATCTAACAAGATTGCTGAGATCCTATGTAAGGACCTGTGGC	Y	+	9236767-9236794:9236901-9236922	Yp11.2d	PREDICTED: Homo sapiens similar to testis specific protein, Y-linked 1 (LOC728395), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]			
Homo sapiens	RefSeq	NM_016188.3	ILMN_21260	ACTL6B	NM_016188.3	NM_016188.3		51412	21536352	NM_016188.3	ACTL6B	NP_057272.1	ILMN_1657855	0005390008	S	1354	ATGGCACTCCTCCCCACACACCTGCTCCCAAGCTCAGATGGAAGTCCCTT	7	-	100078755-100078804	7q22.1c	Homo sapiens actin-like 6B (ACTL6B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10380635] [evidence IDA]; Any of a family of protein complexes that regulate transcription by remodeling chromatin. Swi/Snf complexes comprise nine or more proteins, including both conserved (core) and nonconserved components; the Swi2/Snf2 ATPase is one of the core components [goid 16514] [evidence ISS]	Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [pmid 10380635] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile [goid 4190] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 10380635] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	BAF53B; ACTL6	BAF53B; ACTL6
Homo sapiens	Unigene	Hs.541084	ILMN_105527	HS.541084	Hs.541084		Hs.541084		3741597	AI190388			ILMN_1905751	0003710441	S	89	CCAATCTCTTCAGTGGGGCCAATATCAGAGGACTGGCATGGGGACCTCAG	18	+	31265929-31265978		qd49b06.x1 Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone IMAGE:1732787 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001006640.1	ILMN_28868	TCEAL1	NM_001006640.1	NM_001006640.1		9338	55749423	NM_001006640.1	TCEAL1	NP_001006641.1	ILMN_1809552	0003830739	I	25	CTAGATGCGGACCGTCTCTGGCAACCAGGAAAAGGCAAATACAAAGAGAG	X	+	102770328-102770377	Xq22.2a	Homo sapiens transcription elongation factor A (SII)-like 1 (TCEAL1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7971997] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 7971997] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7971997] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7971997] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SIIR; p21; pp21	SIIR; p21; pp21
Homo sapiens	RefSeq	XM_926499.1	ILMN_38063	LOC653214	XM_926499.1	XM_926499.1		653214	89058150	XM_926499.1	LOC653214	XP_931592.1	ILMN_1656562	0003190475	S	3	GGAAAGAAAACAGTATGAAGCGGACAATTCAGGAAAAGTAATCGAATTGT	21	+	19151615-19151664	21q21.1e	PREDICTED: Homo sapiens similar to peptidylprolyl isomerase A isoform 1 (LOC653214), mRNA.					
Homo sapiens	RefSeq	XM_084868.9	ILMN_30794	TSPAN19	XM_084868.10	XM_084868.10		144448	113423426	XM_084868.10	TSPAN19	XP_084868.6	ILMN_1746349	0007100470	A	392	CAGCATTCATCATCACAAAGAAAGAGGAGGTTCAGCAACTATGGCATGAC	12	-	83937625-83937646:83941235-83941262	12q21.31e	PREDICTED: Homo sapiens tetraspanin 19 (TSPAN19), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_943091.1	ILMN_31138	LOC647888	XM_943091.1	XM_943091.1		647888	88950413	XM_943091.1	LOC647888	XP_948184.1	ILMN_1658605	0000460133	S	2	CTATGACTTGGAGACAAAGGCCAAGTCAAGCCCCACTGTGAGATTCAATG					PREDICTED: Homo sapiens hypothetical protein LOC647888 (LOC647888), mRNA.					
Homo sapiens	RefSeq	NM_033025.4	ILMN_20515	SYDE1	NM_033025.4	NM_033025.4		85360	42475969	NM_033025.4	SYDE1	NP_149014.3	ILMN_1755822	0002370348	S	3089	CACAGAGGAGGGAGCAGTTTGCAGTGCCCAGCCACCCTGAAATCCCCAAT	19	+	15086624-15086673	19p13.12b	Homo sapiens synapse defective 1, Rho GTPase, homolog 1 (C. elegans) (SYDE1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that initiates the activity of an inactive GTPase of the Rho family through the replacement of GDP by GTP [goid 32862] [evidence ISS]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence ISS]	FLJ13511; 7h3	FLJ13511; 7h3
Homo sapiens	RefSeq	XM_940845.1	ILMN_39968	LOC651643	XM_940845.1	XM_940845.1		651643	89043054	XM_940845.1	LOC651643	XP_945938.1	ILMN_1774111	0005570762	S	1095	AGCTAGACAGAAAAGTTACCCAAGTCCCCACCCGACCCAGAAGCCCAGTC					PREDICTED: Homo sapiens hypothetical protein LOC651643 (LOC651643), mRNA.					
Homo sapiens	RefSeq	XR_036896.1	ILMN_353028	LOC100132340	XR_036896.1	XR_036896.1		100132340	169177359	XR_036896.1	LOC100132340		ILMN_3249520	0005220687	S	3136	GGTGTTGCTGTTGAAGCCGTCAACTGTCTTTCTCTGTCTTTCTTTAACCC	9	-	43017630-43017679	9p11.2d	PREDICTED: Homo sapiens misc_RNA (LOC100132340), miscRNA.					
Homo sapiens	RefSeq	NM_006999.3	ILMN_866	POLS	NM_006999.3	NM_006999.3		11044	62548868	NM_006999.3	POLS	NP_008930.1	ILMN_1756793	0004730292	S	3573	GACTGTAAACCCACATTAAGGAAACCACTACGGGTCTGGCAGTGCGTGTC	5	+	6756873-6756922	5p15.31b	Homo sapiens polymerase (DNA directed) sigma (POLS), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10066793] [evidence IDA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix [goid 6302] [pmid 10066793] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cell cycle process by which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome [goid 7062] [pmid 10066793] [evidence TAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [pmid 10066793] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease [goid 42493] [pmid 10066793] [evidence IDA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]; Interacting selectively with any protein from the structural maintenance of chromosomes (SMC) family, a group of chromosomal ATPases with a role in mitotic chromosome organization [goid 43221] [pmid 10066793] [evidence TAS]	TRF4; TRF4-1; POLK; LAK-1	POLK; LAK-1; TRF4; TRF4-1
Homo sapiens	RefSeq	NR_004408.1	ILMN_350364	RNU1-3	NR_004408.1	NR_004408.1		26869	161169047	NR_004408.1	RNU1-3		ILMN_3246273	0005670152	S	84	GACCCCTGCGATTTCCCCAAATGTGGGAAACTCGACTGCATAATTTGTGG	1	-	16993310-16993359		Homo sapiens RNA, U1 small nuclear 3 (RNU1-3), small nuclear RNA.				U1C21	U1C21
Homo sapiens	RefSeq	XM_942993.1	ILMN_33590	LOC647741	XM_942993.1	XM_942993.1		647741	89028483	XM_942993.1	LOC647741	XP_948086.1	ILMN_1795159	0005820382	S	94	CCCAACCTGAACACCGCCCTTCTCCCTCCTCCTGGTCACCGAATCAGCGA					PREDICTED: Homo sapiens hypothetical LOC647741 (LOC647741), mRNA.					
Homo sapiens	RefSeq	NM_001005172.1	ILMN_164968	OR52K2	NM_001005172.1	NM_001005172.1		119774	52353263	NM_001005172.1	OR52K2	NP_001005172.1	ILMN_1730441	0002750326	S	745	GCCATCTTAGCCTTCTACACAACTGTGGTCATCTCTTCAGTCATGCACCG	11	+	4427890-4427939	11p15.4d	Homo sapiens olfactory receptor, family 52, subfamily K, member 2 (OR52K2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-7	OR11-7
Homo sapiens	RefSeq	XM_927523.1	ILMN_45654	KRTAP2-1	XM_926554.2	XM_926554.2		81872	113426890	XM_926554.2	KRTAP2-1	XP_931647.2	ILMN_1806253	0006620551	S	535	CTGCTGAGCAGTGCACTGACTGCCCGGAACGCGTAACTCACCTTCTGAAA	17	-	36456525-36456539:36456540-36456574	17q21.2a	PREDICTED: Homo sapiens keratin associated protein 2-1 (KRTAP2-1), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	NM_033184.2	ILMN_45654	KRTAP2-1	XM_926554.2	XM_926554.2		81872	113426890	XM_926554.2	KRTAP2-1	XP_931647.2	ILMN_1658448	0006020382	S	300	GCTGCCCCTCGTCGTGCACGGCTGTGGTGTGCAGGCCCTGCTGCTGGGCC	17	-	36456760-36456809	17q21.2a	PREDICTED: Homo sapiens keratin associated protein 2-1 (KRTAP2-1), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		KAP2.4; MGC119885; MGC119882; KRTAP2.4; MGC74790; MGC119884
Homo sapiens	RefSeq	XR_039954.1	ILMN_335777	LOC727916	XR_039954.1	XR_039954.1		727916	169168716	XR_039954.1	LOC727916		ILMN_3200080	0000380066	A	96	TGGATTCCCAGCCCGAGAGGCGACGATGCGACGGCTACTCACAGGAATAT				6q12a	PREDICTED: Homo sapiens misc_RNA (LOC727916), miscRNA.					
Homo sapiens	RefSeq	NM_013349.3	ILMN_29086	NENF	NM_013349.3	NM_013349.3		29937	39725690	NM_013349.3	NENF	NP_037481.1	ILMN_2142554	0003120139	S	543	CAGGTTCTTGGGAGCGTGAGGCAGGAAGACACTAGGTGCTGAATCTCCTG	1	+	210685989-210686038	1q32.3b	Homo sapiens neuron derived neurotrophic factor (NENF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver [goid 46914] [evidence IEA]	SPUF; SCIRP10; CIR2	SPUF; SCIRP10; CIR2
Homo sapiens	RefSeq	XM_926521.1	ILMN_32096	LOC653137	XM_926521.2	XM_926521.2		653137	113429266	XM_926521.2	LOC653137	XP_931614.1	ILMN_1703409	0003360259	S	1616	TGCCAGTTTTGGGGGACTTCGACCTTTGACTCAATCACTATACCCCTTCA	22	-	17238694-17238743	22q11.21b	PREDICTED: Homo sapiens hypothetical LOC653137 (LOC653137), mRNA.					
Homo sapiens	RefSeq	XM_926598.1	ILMN_31568	LOC643237	XM_926598.1	XM_926598.1		643237	89035659	XM_926598.1	LOC643237	XP_931691.1	ILMN_1656879	0007400082	S	96	CAGATCCAACAGTTCTCTTAGGGCTAAGGTCTCTTATGGAAGCAAGTCAA	12	-	90463166-90463215		PREDICTED: Homo sapiens hypothetical protein LOC643237 (LOC643237), mRNA.					
Homo sapiens	RefSeq	NM_005388.2	ILMN_34020	PDCL	NM_005388.3	NM_005388.3		5082	88758593	NM_005388.3	PDCL	NP_005379.3	ILMN_1694041	0005550343	S	1555	CTTCCTCCAGCATGACTAAGTCTGGAACAGCAGGAAGGGTTGATGCTTAC	9	-	125581761-125581810	9q33.2b	Homo sapiens phosducin-like (PDCL), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11256614] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10524200] [evidence NAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Inhibits signal transduction the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form [goid 16299] [pmid 10524200] [evidence NAS]	PhLP; DKFZp564M1863	PhLP; DKFZp564M1863
Homo sapiens	RefSeq	NM_001001317.2	ILMN_357050	TRYX3	NM_001001317.2	NM_001001317.2		136541	170650697	NM_001001317.2	TRYX3	NP_001001317.1	ILMN_3247395	0001260368	S	666	GAAGGAGGCAGCCCTGCAAGGAAGTTTCTGCTGCCCCGGCAATCTGCAAT	7	-	141952160-141952190:141952292-141952310	7q34e	Homo sapiens trypsin X3 (TRYX3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	NM_006136.2	ILMN_178270	CAPZA2	NM_006136.2	NM_006136.2		830	41327721	NM_006136.2	CAPZA2	NP_006127.1	ILMN_1768870	0005090403	S	2117	ACTTGAGTGGAATCCTTTCCTCACGTACTCCCACAGACGTCTGGGCCTGG	7	+	116346310-116346359	7q31.2c	Homo sapiens capping protein (actin filament) muscle Z-line, alpha 2 (CAPZA2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A heterodimer consisting of alpha and a beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments [goid 8290] [pmid 9331217] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9331217] [evidence TAS]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9331217] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]; The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CAPZ; CAPPA2	CAPZ; CAPPA2
Homo sapiens	RefSeq	XM_936480.1	ILMN_34719	LOC647406	XM_936480.1	XM_936480.1		647406	89026510	XM_936480.1	LOC647406	XP_941573.1	ILMN_1799560	0001710347	S	361	TCTGTGCAAAAACCCCACCCTCTCCTGAGCCCTAACCATACTCCCCAGGG					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region LB2 precursor (LOC647406), mRNA.					
Homo sapiens	RefSeq	NM_000750.3	ILMN_365366	CHRNB4	NM_000750.3	NM_000750.3		1143	194018437	NM_000750.3	CHRNB4	NP_000741.1	ILMN_3249574	0002480279	S	2299	GGGCTTCCCAAGCTCTTTCCACAGCCACATCAGTCAGGGCATGGCTCCAA	15	-	78916735-78916784	15q25.1a	Homo sapiens cholinergic receptor, nicotinic, beta 4 (CHRNB4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 11742001] [evidence TAS]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 8906617] [evidence IDA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 8906617] [evidence TAS]; Any process that modulates the frequency, rate or extent of smooth muscle contraction [goid 6940] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8906617] [evidence IDA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [pmid 1330682] [evidence TAS]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; A change in the behavior of an organism as a result of a nicotine stimulus [goid 35095] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [pmid 11742001] [evidence NAS]; The process of communication from a neuron to a smooth muscle in the bladder that contributes to the expulsion of urine from the body [goid 60084] [pmid 11450844] [evidence IMP]	 [goid 4889] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 4889] [pmid 8906617] [evidence TAS];  [goid 4889] [pmid 11742001] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [pmid 8906617] [evidence IDA]		
Homo sapiens	RefSeq	XM_939046.1	ILMN_42534	LOC649963	XM_939046.1	XM_939046.1		649963	88998906	XM_939046.1	LOC649963	XP_944139.1	ILMN_1746551	0002340687	S	433	GGCTCCTGGAGACCTGATGAAAAGGAGCCCGCTCTTATCCCCTGCAAAAG					PREDICTED: Homo sapiens similar to T-box 1 isoform C (LOC649963), mRNA.					
Homo sapiens	RefSeq	XR_037423.1	ILMN_343158	LOC729314	XR_037423.1	XR_037423.1		729314	169215717	XR_037423.1	LOC729314		ILMN_3225162	0003390403	A	1879	TTTTGGTAGGGGTTGTATTGAATCTCTAGACTGCTCTGGGCAGTGTGGTC				22q11.21b	PREDICTED: Homo sapiens misc_RNA (LOC729314), miscRNA.					
Homo sapiens	RefSeq	XR_037423.1	ILMN_343158	LOC729314	XR_037423.1	XR_037423.1		729314	169215717	XR_037423.1	LOC729314		ILMN_3301746	0004060148	M	673	GGTGGCTCTGCAGGAGGCCAACTCATTACCCAGCAATGGCCTTGCCTGAT				22q11.21b	PREDICTED: Homo sapiens misc_RNA (LOC729314), miscRNA.					
Homo sapiens	RefSeq	XM_375153.3	ILMN_45585	LOC653735	XM_375153.3	XM_375153.3		653735	89044856	XM_375153.3	LOC653735	XP_375153.2	ILMN_1702799	0003190612	S	135	TGGGAGGACCCGGCTTCACCGACCTGTGGGCTATCGCATAGGAAAACCCT	18	+	14464938-14464987	18p11.21b	PREDICTED: Homo sapiens hypothetical LOC653735 (LOC653735), mRNA.					
Homo sapiens	RefSeq	NM_014774.1	ILMN_5593	KIAA0494	NM_014774.1	NM_014774.1		9813	7662159	NM_014774.1	KIAA0494	NP_055589.1	ILMN_1697597	0001090072	S	5361	GTCACAGTTGAGGATTTTGGCTGTGATGGGCTCATACTCATAATGGCCTG	1	-	46913774-46913823	1p33d	Homo sapiens KIAA0494 (KIAA0494), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	RP11-8J9.3	RP11-8J9.3
Homo sapiens	RefSeq	XM_001720156.1	ILMN_349991	LOC100131727	XM_001720156.1	XM_001720156.1		100131727	169166405	XM_001720156.1	LOC100131727	XP_001720208.1	ILMN_3292990	0005960307	M	310	GCATCCTGTCGCCAGCGCATCCCTCAGAGGAGTTTCAGCATTTGGGGATT	4	+	186629894-186629908:186630263-186630297	4q35.1f	PREDICTED: Homo sapiens hypothetical LOC100131727 (LOC100131727), mRNA.					
Homo sapiens	RefSeq	NM_000232.3	ILMN_162593	SGCB	NM_000232.3	NM_000232.3		6443	51173146	NM_000232.3	SGCB	NP_000223.1	ILMN_2194467	0001190162	S	3766	CCACAGTATTCTAGAGACGGGTTGCAATGACAAGGGGGGCAAATGAAATC	4	-	52582042-52582091	4q12a	Homo sapiens sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7581448] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [pmid 7581448] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8968749] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 7581448] [evidence TAS]		LGMD2E; SGC; A3b	LGMD2E; SGC; A3b
Homo sapiens	RefSeq	NM_000232.3	ILMN_162593	SGCB	NM_000232.3	NM_000232.3		6443	51173146	NM_000232.3	SGCB	NP_000223.1	ILMN_1810324	0001510471	S	3684	ATGACAAGCAGTAGCCATGGGGGAGGTGGGTGACAAAGATAGGACCCCGG	4	-	52582124-52582173	4q12a	Homo sapiens sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) (SGCB), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7581448] [evidence TAS]; A protein complex formed of four sarcoglycans plus sarcospan; there are six known sarcoglycans: alpha-, beta-, gamma-, delta-, epsilon- and zeta-sarcoglycan; all are N-glycosylated single-pass transmembrane proteins. The sarcoglycan-sarcospan complex is a subcomplex of the dystrophin glycoprotein complex, and is fixed to the dystrophin axis by a lateral association with the dystroglycan complex [goid 16012] [pmid 7581448] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 8968749] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 7581448] [evidence TAS]		LGMD2E; SGC; A3b	LGMD2E; SGC; A3b
Homo sapiens	RefSeq	NM_001739.1	ILMN_8520	CA5A	NM_001739.1	NM_001739.1		763	4502520	NM_001739.1	CA5A	NP_001730.1	ILMN_1731292	0000840521	S	926	GAAGGTCTGGGCGTCCTTCCAGGCCACTAATGAGGGCACAAGGTCCTAGA	16	-	87921733-87921734:87921735-87921782	16q24.2b	Homo sapiens carbonic anhydrase VA, mitochondrial (CA5A), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8356065] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 7490083] [evidence NAS]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [pmid 8356065] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CAVA; CAV; CA5	CAVA; CAV; CA5
Homo sapiens	Unigene	Hs.260074	ILMN_83781	HS.260074	Hs.260074		Hs.260074		27822637	BX091899			ILMN_1897864	0000070059	S	573	GGGACCCTTTTCAATCTATATCAGCTGGGCTCTGGGACTGAATCTCTCAC	15	-	49287587-49287636		BX091899 Soares placenta Nb2HP Homo sapiens cDNA clone IMAGp998O18186 ; IMAGE:133097, mRNA sequence					
Homo sapiens	RefSeq	XR_036967.1	ILMN_343278	LOC728199	XR_036967.1	XR_036967.1		728199	169202655	XR_036967.1	LOC728199		ILMN_3208918	0000380215	A	1128	GGAATCGCCTGGCCGATCCTTTTAACAGCATCCACATCTACCCATTCGTG				11p15.4d	PREDICTED: Homo sapiens misc_RNA (LOC728199), miscRNA.					
Homo sapiens	RefSeq	NM_181472.1	ILMN_8951	CMTM7	NM_181472.1	NM_181472.1		112616	31657098	NM_181472.1	CMTM7	NP_852137.1	ILMN_2403247	0004290403	A	985	GGGGTTTGTGAATACTCCCGCCTAAATCCCTTCTACTTCACTCCTCAGGG	3	+	32468908-32468957	3p22.3c	Homo sapiens CKLF-like MARVEL transmembrane domain containing 7 (CMTM7), transcript variant 2, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	CKLFSF7; FLJ30992	CKLFSF7; FLJ30992
Homo sapiens	RefSeq	NM_138410.2	ILMN_8951	CMTM7	NM_181472.1	NM_181472.1		112616	31657098	NM_181472.1	CMTM7	NP_852137.1	ILMN_1698934	0002140239	A	1079	GCTTGTCAGTCCGGTCTTAGAGATACCCTCTTTCCTGAAGTGAGGCGTGC	3	+	32470769-32470818	3p22.3c	Homo sapiens CKLF-like MARVEL transmembrane domain containing 7 (CMTM7), transcript variant 2, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	CKLFSF7; FLJ30992	CKLFSF7; FLJ30992
Homo sapiens	RefSeq	NM_032638.3	ILMN_20021	GATA2	NM_032638.3	NM_032638.3		2624	31982886	NM_032638.3	GATA2	NP_116027.2	ILMN_2102670	0004010196	S	2688	TGGGTCCAGTTGATTGTACGTAGCCACAGGAGCCCTGCTATGAAAGGAAT	3	-	129681589-129681638	3q21.3c	Homo sapiens GATA binding protein 2 (GATA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1370462] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 1370462] [evidence TAS]; Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific gene or set of genes by RNA polymerase II (Pol II), originating at a Pol II-specific promoter [goid 10552] [pmid 15016828] [evidence IDA]; The progression of the pituitary gland over time from its initial formation until its mature state. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands [goid 21983] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8078582] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15016828] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NFE1B; MGC2306	NFE1B; MGC2306
Homo sapiens	RefSeq	NM_001010861.1	ILMN_181783	LPPR5	NM_001037317.1	NM_001037317.1		163404	82659093	NM_001037317.1	LPPR5	NP_001032394.1	ILMN_1705187	0007000181	S	3847	TTTCCACTTCTAACTGGGCCTCTCTTTTCTCAGGATCTATCCTAGCCAAA	1	-	99355919-99355968	1p21.3a	Homo sapiens lipid phosphate phosphatase-related protein type 5 (LPPR5), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PAP2	
Homo sapiens	RefSeq	NM_001037317.1	ILMN_181783	LPPR5	NM_001037317.1	NM_001037317.1		163404	82659093	NM_001037317.1	LPPR5	NP_001032394.1	ILMN_2361742	0000840681	A	3269	GACTTCCAAGCAGCCAAGCAGGAATGTTTTTCCTGTTGGAAGCCTTAGCC	1	-	99356497-99356546	1p21.3a	Homo sapiens lipid phosphate phosphatase-related protein type 5 (LPPR5), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PAP2	PAP2
Homo sapiens	RefSeq	NM_004327.2	ILMN_162687	BCR	NM_004327.3	NM_004327.3		613	82546842	NM_004327.3	BCR	NP_004318.3	ILMN_1670398	0003180682	A	4492	TTCCTGAGGTGTCCTTGGGCCACCCCCAAGTGTTGGGCCATCTGCCAAGA	22	+	21987789-21987838	22q11.23a	Homo sapiens breakpoint cluster region (BCR), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 1657398] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence NAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 1657398] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 1903516] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FGFR1/BCR; D22S11; ALL; FLJ16453; PHL; D22S662; CML; BCR1; BCR/FGFR1	PHL; D22S662; BCR1; CML; D22S11; ALL
Homo sapiens	RefSeq	XM_933197.1	ILMN_162687	BCR	NM_004327.3	NM_004327.3		613	82546842	NM_004327.3	BCR	NP_004318.3	ILMN_1668907	0005270523	S	45	CCCCCCGCCCTGTGCCCACGGCGCGGCCCCTTTAAGAGGCCCGCCTGGCT	22	+	21852596-21852645	22q11.23a	Homo sapiens breakpoint cluster region (BCR), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 1657398] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence NAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 1657398] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 1903516] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FGFR1/BCR; D22S11; ALL; FLJ16453; PHL; D22S662; CML; BCR1; BCR/FGFR1	
Homo sapiens	RefSeq	NM_004327.2	ILMN_162687	BCR	NM_004327.3	NM_004327.3		613	82546842	NM_004327.3	BCR	NP_004318.3	ILMN_1680683	0004070270	I	3539	CAACAAGACGAAGATCCCCAAGGAGGACGGCGAGAGCACGGACAGACTCA	22	+	21967273-21967322	22q11.23a	Homo sapiens breakpoint cluster region (BCR), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence NAS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 1657398] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence NAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence NAS]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 1657398] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 1903516] [evidence TAS]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FGFR1/BCR; D22S11; ALL; FLJ16453; PHL; D22S662; CML; BCR1; BCR/FGFR1	PHL; D22S662; BCR1; CML; D22S11; ALL
Homo sapiens	RefSeq	NM_014233.1	ILMN_170658	UBTF	NM_001076683.1	NM_001076683.1		7343	115529450	NM_001076683.1	UBTF	NP_001070151.1	ILMN_1806946	0005670296	S	2728	GTCCCAAAGAGTTTGATGAGGCCCTCCACACCTGCGGCCCAATCCAAGGT	17	-	42284226-42284275	17q21.31c	Homo sapiens upstream binding transcription factor, RNA polymerase I (UBTF), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2330041] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11741541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 2330041] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [pmid 2330041] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase I transcription [goid 3701] [pmid 2330041] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16777843] [evidence IPI]	UBF; NOR-90	UBF; NOR-90
Homo sapiens	RefSeq	NM_001076683.1	ILMN_170658	UBTF	NM_001076683.1	NM_001076683.1		7343	115529450	NM_001076683.1	UBTF	NP_001070151.1	ILMN_2292334	0007150079	I	1	ATTAGCCGTCGCTCCGCTTCGCCATCTCGGGCTTTGTCTGGCGACTCGCT	17	-	42298200-42298249	17q21.31c	Homo sapiens upstream binding transcription factor, RNA polymerase I (UBTF), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2330041] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11741541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 2330041] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [pmid 2330041] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to initiate or regulate RNA polymerase I transcription [goid 3701] [pmid 2330041] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16777843] [evidence IPI]	UBF; NOR-90	UBF; NOR-90
Homo sapiens	RefSeq	NM_002083.2	ILMN_777	GPX2	NM_002083.2	NM_002083.2		2877	32967606	NM_002083.2	GPX2	NP_002074.2	ILMN_2133205	0005090278	S	663	GTGAACTGCTCAACACACAGATCTCCTACTCCATCCAGTCCTGAGGAGCC	14	-	65406153-65406202	14q23.3a	Homo sapiens glutathione peroxidase 2 (gastrointestinal) (GPX2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8428933] [evidence TAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2 glutathione + H2O2 = oxidized glutathione + 2 H2O [goid 4602] [pmid 8428933] [evidence TAS]; Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8428933] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	GPRP; GSHPx-2; GI-GPx; GSHPX-GI	GPRP; GSHPx-2; GI-GPx; GSHPX-GI
Homo sapiens	Unigene	Hs.561493	ILMN_114910	HS.561493	Hs.561493		Hs.561493		27880608	BX116720			ILMN_1910330	0003370102	S	264	GGAGAGTGCTTGTCACCCATGTCCACACCCAAGCTTAGTGACCAGAGCAT	6	+	158610004-158610053		BX116720 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998F241782, mRNA sequence					
Homo sapiens	RefSeq	NM_018426.1	ILMN_28224	TMEM63B	NM_018426.1	NM_018426.1		55362	55769588	NM_018426.1	TMEM63B	NP_060896.1	ILMN_1728349	0004180521	S	2840	AGCATGACCAGGAGAGGGTTAATGAGAGCCAAGAGGAGTACCTGGTGCAC	6	+	44122897-44122946	6p21.1b	Homo sapiens transmembrane protein 63B (TMEM63B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp686N2275; C6orf110; RP3-421H19.2	DKFZp686N2275; C6orf110; RP3-421H19.2
Homo sapiens	RefSeq	NM_133375.2	ILMN_29373	DIS3L	NM_133375.2	NM_133375.2		115752	34147483	NM_133375.2	DIS3L	NP_588616.1	ILMN_1795822	0004280300	S	3570	CAGTTTTCAGTAATGAGTGGACAGTAAGTGGTGGCTCTGCAGATGGCCCC	15	+	64413202-64413251	15q22.31c	Homo sapiens DIS3 mitotic control homolog (S. cerevisiae)-like (DIS3L), mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC4562; FLJ38088; KIAA1955	MGC4562; FLJ38088; KIAA1955
Homo sapiens	RefSeq	NM_001080392.1	ILMN_167929	KIAA1147	NM_001080392.1	NM_001080392.1		57189	122937184	NM_001080392.1	KIAA1147	NP_001073861.1	ILMN_2355033	0001050082	A	7021	GACACTGCATAGATTTTGCCCTGAATACTGGTGTGCCCAGGTATGCCGTG	7	-	141356753-141356802	7q34e	Homo sapiens KIAA1147 (KIAA1147), mRNA.				PRO2561; LCHN	PRO2561; LCHN
Homo sapiens	RefSeq	NR_030156.1	ILMN_387780	MIR410	NR_030156.1	NR_030156.1		574434	262205120	NR_030156.1	MIR410		ILMN_3310045	0004390577	S	1	GTACCTGAGAAGAGGTTGTCTGTGATGAGTTCGCTTTTATTAATGACGAA				14q32.31a	Homo sapiens microRNA 410 (MIR410), microRNA.					
Homo sapiens	RefSeq	NM_007264.3	ILMN_1685	GPR182	NM_007264.3	NM_007264.3		11318	46397401	NM_007264.3	GPR182	NP_009195.1	ILMN_1696810	0000050474	S	1342	AAAGGCACAGGTGAGAGTATAGGTGGGAGATTTGGGGGGATGTAGAGGGG	12	+	55676508-55676557	12q13.3a	Homo sapiens G protein-coupled receptor 182 (GPR182), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9367907] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]		7TMR; ADMR; hrhAMR; AMR; gamrh; MGC34399	7TMR; ADMR; hrhAMR; AMR; gamrh; MGC34399
Homo sapiens	RefSeq	NR_024170.1	ILMN_365278	MAPKSP1	NR_024170.1	NR_024170.1		8649	207028613	NR_024170.1	MAPKSP1		ILMN_3225432	0004280671	A	4049	CCAAGGAGCAGAACTAGATACCTGGGGGATAAGGATCCCAGGAGTGAGCC	4	-	100799630-100799679	4q23b	Homo sapiens MAPK scaffold protein 1 (MAPKSP1), transcript variant 2, transcribed RNA.					
Homo sapiens	RefSeq	NM_001017965.1	ILMN_15771	LOC150223	NM_001017965.1	NM_001017965.1		150223	63054869	NM_001017965.1	LOC150223	NP_001017965.1	ILMN_1670124	0006330465	I	368	AGCCGCAGCTACAGGAGGATGCTCGCGAGGACCCCCAGAGCTCCGCCCGG	22	-	20313834-20313883	22q11.21f	Homo sapiens hypothetical protein LOC150223 (LOC150223), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	XM_927288.1	ILMN_42746	LOC644044	XM_927288.1	XM_927288.1		644044	88997701	XM_927288.1	LOC644044	XP_932381.1	ILMN_1677482	0003450079	S	3	GGATGACTTTGAGGGGTTTGAGATTTCAGTGGATGAAGCAACTGAAGATG	6	-	115855465-115855514		PREDICTED: Homo sapiens hypothetical protein LOC644044 (LOC644044), mRNA.					
Homo sapiens	RefSeq	NR_000017.1	ILMN_1891	SNORD36B	NR_000017.1	NR_000017.1		26814	22546017	NR_000017.1	SNORD36B		ILMN_3237044	0001090386	S	21	CTTGGCCTGAAATTACTGTGAAGAGTAAAACCGAGCTTTTTAACACTGAG	9	+	135206790-135206839	9q34.2a	Homo sapiens small nucleolar RNA, C/D box 36B (SNORD36B), small nucleolar RNA.				U36b; RNU36B	U36b; RNU36B
Homo sapiens	RefSeq	NM_001867.2	ILMN_17626	COX7C	NM_001867.2	NM_001867.2		1350	18105039	NM_001867.2	COX7C	NP_001858.1	ILMN_1798189	0007570475	S	24	TGGTGAGGTGCCGCCATTTCATCTGTCCTCATTCTCTGCGCCTTTCGCAG	5	+	85913807-85913856	5q14.3d	Homo sapiens cytochrome c oxidase subunit VIIc (COX7C), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 2155413] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]		
Homo sapiens	RefSeq	XM_001713606.1	ILMN_340150	LOC727722	XM_001713606.1	XM_001713606.1		727722	169165927	XM_001713606.1	LOC727722	XP_001713658.1	ILMN_3239725	0004070452	S	153	ATTGTGTAACCGGTTAAATAAGCTTGCTGGACTTTGTCCCTGTGTATGAG				3q13.33b	PREDICTED: Homo sapiens homogentisate 1,2-dioxygenase like (LOC727722), mRNA.					
Homo sapiens	RefSeq	XR_015989.1	ILMN_165764	LOC728887	XR_015989.1	XR_015989.1		728887	113412051	XR_015989.1	LOC728887		ILMN_3227150	0004040167	A	848	ACGTAACATCCCTATTGCTAACCGTGAAGGCACCCTTGAACCATCTACGA				1p34.1d	PREDICTED: Homo sapiens misc_RNA (LOC728887), miscRNA.					
Homo sapiens	RefSeq	NM_133462.1	ILMN_163780	TTC14	NM_001042601.1	NM_001042601.1		151613	110611916	NM_001042601.1	TTC14	NP_001036066.1	ILMN_1696757	0007000240	S	3847	ATAGAAGGTGGGAACCAGGTTCTGTGAGGCATTCTACCTCACCAGCAAGC	3	+	181810685-181810734	3q26.33b	Homo sapiens tetratricopeptide repeat domain 14 (TTC14), transcript variant 2, mRNA.			Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	DRDL5813; KIAA1980; DKFZp313M1015; FLJ00166; PRO19630	KIAA1980; FLJ00166
Homo sapiens	RefSeq	NM_015932.2	ILMN_7002	POMP	NM_015932.2	NM_015932.2		51371	21361533	NM_015932.2	POMP	NP_057016.1	ILMN_2093810	0006560717	S	1002	GTTATTGTTTGATTATTTCAGGTTGAAAAGTAGAAGTTCCAAGGTTTTGA	13	+	28150744-28150793	13q12.3a	Homo sapiens proteasome maturation protein (POMP), mRNA.				UMP1; HSPC014; PNAS-110; C13orf12	UMP1; HSPC014; PNAS-110; C13orf12
Homo sapiens	RefSeq	NR_026703.1	ILMN_387488	VTRNA1-1	NR_026703.1	NR_026703.1		56664	222352136	NR_026703.1	VTRNA1-1		ILMN_3309759	0004220255	S	32	TTCTTTAATTGAAACAAGCAACCTGTCTGGGTTGTTCGAGACCCGCGGGC	5	+	140090892-140090941		Homo sapiens vault RNA 1-1 (VTRNA1-1), non-coding RNA.					
Homo sapiens	RefSeq	XM_001725908.1	ILMN_351738	LOC653557	XM_001725908.1	XM_001725908.1		653557	169209869	XM_001725908.1	LOC653557	XP_001725960.1	ILMN_3295109	0004280189	M	7	CCGGCGCAGGCCCAGGCTCCACTCCCCAGCTGTGAAAGGAGGAGCTCTAT	16	-	33412088-33412099:33417150-33417187	16p11.2a	PREDICTED: Homo sapiens hypothetical LOC653557 (LOC653557), mRNA.					
Homo sapiens	RefSeq	NM_004951.3	ILMN_165993	EBI2	NM_004951.3	NM_004951.3		1880	50962860	NM_004951.3	EBI2	NP_004942.1	ILMN_2168217	0004040037	S	1321	CATTGGGCACTTTCCCATCTCCAACTCGGAAGTAAGCCCAAGAGAACAAC	13	-	98745149-98745198	13q32.3a	Homo sapiens Epstein-Barr virus induced gene 2 (lymphocyte-specific G protein-coupled receptor) (EBI2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8383238] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8383238] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8383238] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]		
Homo sapiens	RefSeq	NM_004951.3	ILMN_165993	EBI2	NM_004951.3	NM_004951.3		1880	50962860	NM_004951.3	EBI2	NP_004942.1	ILMN_1798706	0004490520	S	1092	CGGCAAGTCAGTGTATCGATTTCTAGTGCTGTGAAGTCAGCCCCTGAAGA	13	-	98745378-98745427	13q32.3a	Homo sapiens Epstein-Barr virus induced gene 2 (lymphocyte-specific G protein-coupled receptor) (EBI2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8383238] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8383238] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8383238] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]		
Homo sapiens	RefSeq	XM_932168.1	ILMN_46933	LOC644403	XM_932168.1	XM_932168.1		644403	89060226	XM_932168.1	LOC644403	XP_937261.1	ILMN_1664557	0005550154	S	354	CCCGCTACCCCTCAACCGCACTCTGGTACTTTGCTTTTCTCAAGTCCCGC	X	+	133133714-133133763	Xq26.2b	PREDICTED: Homo sapiens hypothetical LOC644403 (LOC644403), mRNA.					
Homo sapiens	RefSeq	NM_021260.1	ILMN_6420	ZFYVE1	NM_021260.1	NM_021260.1		53349	30795179	NM_021260.1	ZFYVE1	NP_067083.1	ILMN_2267084	0005890601	I	1448	GACCGGCTGCATAACGACCTCTTCAAATTCCTTGGGGATGCCTCAGAAGC	14	-	73464649-73464698	14q24.2b	Homo sapiens zinc finger, FYVE domain containing 1 (ZFYVE1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11739631] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [pmid 11256955] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 11739631] [evidence IDA]		Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [pmid 11256955] [evidence IDA]; Interacting selectively with phosphatidylinositol-3,4,5-triphosphate, the triphosphorylated derivative of phosphatidylinositol [goid 5547] [pmid 11804589] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11739631] [evidence NAS]; Interacting selectively with phosphatidylinositol-3,4-bisphosphate, a diphosphorylated derivative of phosphatidylinositol [goid 43325] [pmid 11804589] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1589; TAFF1; ZNFN2A1; DFCP1	KIAA1589; TAFF1; ZNFN2A1; DFCP1
Homo sapiens	RefSeq	NM_021260.1	ILMN_6420	ZFYVE1	NM_021260.1	NM_021260.1		53349	30795179	NM_021260.1	ZFYVE1	NP_067083.1	ILMN_2358382	0007210390	A	3935	CTCGGAGGGGCGATCATGAGAAACCTTCCAGGGAAACTGAGCACAGGATG	14	-	73436579-73436628	14q24.2b	Homo sapiens zinc finger, FYVE domain containing 1 (ZFYVE1), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11739631] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [pmid 11256955] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 11739631] [evidence IDA]		Interacting selectively with phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol [goid 5545] [pmid 11256955] [evidence IDA]; Interacting selectively with phosphatidylinositol-3,4,5-triphosphate, the triphosphorylated derivative of phosphatidylinositol [goid 5547] [pmid 11804589] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 11739631] [evidence NAS]; Interacting selectively with phosphatidylinositol-3,4-bisphosphate, a diphosphorylated derivative of phosphatidylinositol [goid 43325] [pmid 11804589] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1589; TAFF1; ZNFN2A1; DFCP1	KIAA1589; TAFF1; ZNFN2A1; DFCP1
Homo sapiens	RefSeq	NM_153685.2	ILMN_28243	C12ORF53	NM_153685.2	NM_153685.2		196500	31559779	NM_153685.2	C12orf53	NP_710152.1	ILMN_1706186	0005670170	S	1861	AGTCAGCTGGTTCAAGGCCATCGGGAGCTCTGCCTCCAAGTCTACCCTTC	12	-	6803216-6803265	12p13.31d	Homo sapiens chromosome 12 open reading frame 53 (C12orf53), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp547D2210	DKFZp547D2210
Homo sapiens	RefSeq	XR_019390.1	ILMN_171698	LOC644761	XR_019390.1	XR_019390.1		644761	113425634	XR_019390.1	LOC644761		ILMN_3201629	0002320241	A	323	ATTCTGATATTGCATGAAACGGCTAGGGCAGGCGAGCGCAGTGGAGTGCC				15q22.2a	PREDICTED: Homo sapiens misc_RNA (LOC644761), miscRNA.					
Homo sapiens	RefSeq	NM_015199.2	ILMN_161875	ANKRD28	NM_015199.2	NM_015199.2		23243	68131556	NM_015199.2	ANKRD28	NP_056014.2	ILMN_1697594	0000360064	S	5769	GCTGTTACCAAAAACATTAAGGTAGTTCTTGCGAATGCCACCCCACTAAG	3	-	15711077-15711126	3p24.3e	Homo sapiens ankyrin repeat domain 28 (ANKRD28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17928403] [evidence IPI]	PITK; KIAA0379	PITK; KIAA0379
Homo sapiens	RefSeq	NM_015199.2	ILMN_161875	ANKRD28	NM_015199.2	NM_015199.2		23243	68131556	NM_015199.2	ANKRD28	NP_056014.2	ILMN_2232520	0002760563	S	6042	AGGCCCTGTTCTGTAGTGTTTCTTATCCTCACACAGAGTAGAAAAGCCTG	3	-	15710804-15710853	3p24.3e	Homo sapiens ankyrin repeat domain 28 (ANKRD28), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17928403] [evidence IPI]	PITK; KIAA0379	PITK; KIAA0379
Homo sapiens	RefSeq	NM_003106.2	ILMN_171554	SOX2	NM_003106.2	NM_003106.2		6657	29826338	NM_003106.2	SOX2	NP_003097.1	ILMN_2177156	0005130156	S	2157	GGCCATGCAGGTTGACACCGTTGGTAATTTATAATAGCTTTTGTTCGATC	3	+	181431878-181431927	3q26.33b	Homo sapiens SRY (sex determining region Y)-box 2 (SOX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7849401] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin [goid 6325] [pmid 7849401] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7849401] [evidence NAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a pigment, any general or particular coloring matter in living organisms, e.g. melanin [goid 46148] [evidence IEA]; The series of events involved in the perception of sound in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. Sound is picked up in the form of vibrations [goid 50910] [evidence IEA]; The series of events involved in equilibrioception in which a sensory mechanical stimulus is received by a cell and converted into a molecular signal. During equilibrioception, mechanical stimuli may be in the form of input from pressure receptors or from the labyrinth system of the inner ears [goid 50973] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7849401] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ANOP3; MGC2413; MCOPS3	ANOP3; MGC2413; MCOPS3
Homo sapiens	Unigene	Hs.429450	ILMN_90807	HS.429450	Hs.429450		Hs.429450		27000643	CA849062			ILMN_1915987	0001470162	S	94	TGTCCTCGCTATGAGATTTCCCACCACCCACGCTGGTGTTCACATCTAGC	3	+	147140512-147140561		ir69h03.y1 HR85 islet Homo sapiens cDNA clone IMAGE:6607902 5, mRNA sequence					
Homo sapiens	RefSeq	NM_003979.3	ILMN_23940	GPRC5A	NM_003979.3	NM_003979.3		9052	63252917	NM_003979.3	GPRC5A	NP_003970.1	ILMN_1682599	0005690270	S	2505	GGTCACCCCTCTCTTCTTGCACTGTCCCCAAACTTGCTGTCAATTCCGAG	12	+	12957521-12957570	12p13.1b	Homo sapiens G protein-coupled receptor, family C, group 5, member A (GPRC5A), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9857033] [evidence TAS]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9857033] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 9857033] [evidence TAS]	RAIG1; RAI3; GPCR5A	RAIG1; RAI3; GPCR5A
Homo sapiens	RefSeq	NM_014737.1	ILMN_10884	RASSF2	NM_014737.1	NM_014737.1		9770	7661963	NM_014737.1	RASSF2	NP_055552.1	ILMN_1812139	0004010398	I	31	GGGGTGGAGAGTGATATGAAGAGCGAGAGAAAAGAGAGGACAGCGGACGA	20	-	4752211-4752260	20p13a	Homo sapiens Ras association (RalGDS/AF-6) domain family 2 (RASSF2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12732644] [evidence IPI]	DKFZp781O1747; KIAA0168	DKFZp781O1747; KIAA0168
Homo sapiens	RefSeq	NM_001356.2	ILMN_183040	DDX3X	NM_001356.3	NM_001356.3		1654	87196350	NM_001356.3	DDX3X	NP_001347.3	ILMN_1794392	0002970195	I	4838	CAGACCCGGCGTTGGCAGTGTAGCCATAACTTTCTGATGTTAGTAAAAAC	X	+	41093910-41093959	Xp11.4b	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (DDX3X), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10329544] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10329544] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 9381176] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HLP2; DDX3; DBX; DDX14	HLP2; DDX3; DBX; DDX14
Homo sapiens	RefSeq	NM_024005.1	ILMN_183040	DDX3X	NM_001356.3	NM_001356.3		1654	87196350	NM_001356.3	DDX3X	NP_001347.3	ILMN_1728870	0000240674	A	2988	GCTCAAGGTCACAAGAAGAAATGAAAGGAACAATCAGCAGCCCTGTTCAG	X	+	41092060-41092109	Xp11.4b	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (DDX3X), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10329544] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10329544] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 9381176] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HLP2; DDX3; DBX; DDX14	HLP2; DDX3; DBX; DDX14
Homo sapiens	RefSeq	NM_014368.2	ILMN_18362	LHX6	NM_014368.3	NM_014368.3		26468	134284358	NM_014368.3	LHX6	NP_055183.2	ILMN_1683752	0005340274	I	1083	CCGGCTGCCTTACACCGCACCCCCCGTCCACCTCAAAGCCGATATGGATG	9	-	124971918-124971967	9q33.2b	Homo sapiens LIM homeobox 6 (LHX6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10393337] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10393337] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC119545; MGC119542; MGC119544; LHX6.1	MGC119545; MGC119542; MGC119544; LHX6.1
Homo sapiens	RefSeq	NR_002809.1	ILMN_15606	LOC338799	NR_002809.1	NR_002809.1		338799	84872096	NR_002809.1	LOC338799		ILMN_2098947	0000780348	S	1935	CCTCCACTTCTGTGCAAGCTTGTGCTGTCATAAGCAGAGATCACAGCCCC	12	-	120718135-120718184	12q24.31b	Homo sapiens hypothetical locus LOC338799 (LOC338799), non-coding RNA.				FLJ37163	FLJ37163
Homo sapiens	Unigene	Hs.20255	ILMN_71632	HS.20255	Hs.20255		Hs.20255		9873865	AV652851			ILMN_1858599	0007610309	S	266	CCTCAGCTGCGAGGTTTGGACCTTGAGGCTTGGATGAGGGAATTTTTCCC	2	-	151813655-151813704		AV652851 GLC Homo sapiens cDNA clone GLCDEG06 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003472.2	ILMN_24694	DEK	NM_003472.2	NM_003472.2		7913	31542502	NM_003472.2	DEK	NP_003463.1	ILMN_1747630	0004480180	S	2329	GCCAGAATATAATGTGCAGGCAATCGTGGATGTCTCTGACAAAGTGTGTC	6	-	18332843-18332892	6p22.3d	Homo sapiens DEK oncogene (DNA binding) (DEK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9050861] [evidence TAS]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9050861] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9050861] [evidence TAS]; Any process involved directly in viral genome replication, including viral nucleotide metabolism [goid 19079] [pmid 9050861] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 9050861] [evidence TAS]; Interacting selectively with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity [goid 42393] [pmid 12140263] [evidence IDA]	D6S231E	D6S231E
Homo sapiens	Unigene	Hs.209882	ILMN_82124	HS.209882	Hs.209882		Hs.209882		5234252	AI767743			ILMN_1881122	0005700129	S	224	GTGATGGTAGGGGATGGGTTCGGGAAAGCCTGAGAAGACTTGGACCCAGG	5	+	3596077-3596126		wh39c03.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2383108 3, mRNA sequence					
Homo sapiens	RefSeq	NM_173848.3	ILMN_4630	RALYL	NM_173848.5	NM_173848.5		138046	154240739	NM_173848.5	RALYL	NP_776247.3	ILMN_1716803	0007400356	S	2737	GTCATTTCACCTCCTGTTCCTAGGAACTCTCCATTCCCAAGCATTGCCAG	8	+	85686844-85686889:85717005-85717008	8q21.2a	Homo sapiens RALY RNA binding protein-like (RALYL), transcript variant 3, mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	HNRPCL3	
Homo sapiens	RefSeq	XR_036886.1	ILMN_352808	LOC100133034	XR_036886.1	XR_036886.1		100133034	169177354	XR_036886.1	LOC100133034		ILMN_3249400	0001170369	S	625	GTATCAGCAGAAACCAAGGAAAACTCCTAAGCTCCTGATCTATGCTGCAT	9	+	42741834-42741883	9p11.2d	PREDICTED: Homo sapiens misc_RNA (LOC100133034), miscRNA.					
Homo sapiens	RefSeq	NM_001018065.1	ILMN_169194	NTRK2	NM_001018065.1	NM_001018065.1		4915	65506768	NM_001018065.1	NTRK2	NP_001018075.1	ILMN_2357855	0000430102	A	1854	ACTGTGAAAGGCAACCCCAAACCAGCGCTTCAGTGGTTCTATAACGGGGC	9	+	86532451-86532500	9q21.33a	Homo sapiens neurotrophic tyrosine kinase, receptor, type 2 (NTRK2), transcript variant d, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1710174] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 16939974] [evidence EXP]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 1710174] [evidence TAS]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 16805430] [evidence EXP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with neurotrophin, any of a family of growth factors that block apoptosis in neurons and thus promote nerve growth [goid 43121] [pmid 1710174] [evidence TAS]	GP145-TrkB; TRKB	GP145-TrkB; TRKB
Homo sapiens	RefSeq	NM_024111.2	ILMN_2489	CHAC1	NM_024111.2	NM_024111.2		79094	34147362	NM_024111.2	CHAC1	NP_077016.1	ILMN_1739241	0001500082	S	1188	GCAGGCTGGATGAGGGATAGTAGGGCATGAGGAGAAGGAGCCCTGTAAGG	15	+	39035692-39035741	15q15.1b	Homo sapiens ChaC, cation transport regulator homolog 1 (E. coli) (CHAC1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	MGC4504	MGC4504
Homo sapiens	RefSeq	NM_017775.2	ILMN_26390	TTC19	NM_017775.2	NM_017775.2		54902	22547158	NM_017775.2	TTC19	NP_060245.2	ILMN_2192385	0007040168	S	2369	TGTGTACTGCTGGTATAGCTGAACTACTGACCTGGATCTTAGTCCTAGCC	17	+	15872406-15872455	17p12a	Homo sapiens tetratricopeptide repeat domain 19 (TTC19), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	MGC19520; 2010204O13Rik; FLJ20343; MGC138312	MGC19520; 2010204O13Rik; FLJ20343; MGC138312
Homo sapiens	Unigene	Hs.528452	ILMN_101086	HS.528452	Hs.528452		Hs.528452		51471818	XM_373596			ILMN_1821588	0001110546	S	1931	ACCGCATGGTGCGGGAGGCCCAGCTACACGCCAGCCTGGACCGCAAATAA					PREDICTED: Homo sapiens hypothetical LOC387994 (LOC387994), mRNA					
Homo sapiens	Unigene	Hs.547738	ILMN_109623	HS.547738	Hs.547738		Hs.547738		32217345	CD693563			ILMN_1823172	0002120746	S	443	TCCAGCAGGTAGTGCGAGGAGATTCGGCAGCTTATTTCTGTGCCAGCTCC	7	+	142004890-142004914:142205052-142205076		EST10086 human nasopharynx Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_175747.2	ILMN_6661	OLIG3	NM_175747.2	NM_175747.2		167826	31343439	NM_175747.2	OLIG3	NP_786923.1	ILMN_1717205	0002510193	S	1903	CTGGGGCCGCTATTGTAAAAGCCTGGGCTCCCTCTAGTAGCTTGCGCCAC	6	-	137855272-137855321	6q23.3c	Homo sapiens oligodendrocyte transcription factor 3 (OLIG3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	Bhlhb7	Bhlhb7
Homo sapiens	RefSeq	NM_147128.3	ILMN_964	ZNRF2	NM_147128.3	NM_147128.3		223082	40316919	NM_147128.3	ZNRF2	NP_667339.1	ILMN_1769503	0003290722	S	3356	CTGTTTCACATTTTTTAAAAGGGCAAGTACAGGAGCAACTGCTGCTACCC	7	+	30368535-30368575:30368576-30368584	7p15.1b	Homo sapiens zinc and ring finger 2 (ZNRF2), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF202	RNF202
Homo sapiens	RefSeq	NM_001033603.1	ILMN_6948	RARA	NM_001033603.1	NM_001033603.1		5914	75812907	NM_001033603.1	RARA	NP_001028775.1	ILMN_1716176	0001470494	I	1	GGGTAAAGTTTCAGCCTCCGCACGTGACTCGCTATGGCCGCTGCCATCGC	17	+	35728036-35728085	17q21.2a	Homo sapiens retinoic acid receptor, alpha (RARA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 2825025] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2825025] [evidence IDA]; Any series of molecular signals generated as a consequence of an estrogen binding to its receptor [goid 30520] [pmid 15831516] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [pmid 15831516] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus [goid 32526] [pmid 17538076] [evidence IMP]; Any process that stops, prevents, or reduces the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon [goid 32689] [pmid 18416830] [evidence IDA]; Any process that stops, prevents, or reduces the frequency, rate, or extent of tumor necrosis factor production [goid 32720] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-13 production [goid 32736] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-4 production [goid 32753] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-5 production [goid 32754] [pmid 18416830] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of T-helper 2 cell differentiation [goid 45630] [pmid 18416830] [evidence IDA]; The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands [goid 48384] [pmid 17538076] [evidence IMP]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid [goid 1972] [pmid 2825025] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with retinoic acid to initiate a change in cell activity. Retinoic acid is one of the forms of vitamin A [goid 3708] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2825025] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10866662] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16432238] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17560333] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR1B1; RAR	NR1B1; RAR
Homo sapiens	RefSeq	NM_014319.3	ILMN_22201	LEMD3	NM_014319.3	NM_014319.3		23592	36287116	NM_014319.3	LEMD3	NP_055134.2	ILMN_1727361	0006520402	S	4208	CTGTAACAGAAAGCCCTATTGTGCCTTACCTGTGTGCTTTTGTGGGCACC	12	+	63927838-63927887	12q14.3a	Homo sapiens LEM domain containing 3 (LEMD3), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10671519] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope [goid 5637] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the nuclear inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5639] [pmid 10671519] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10671519] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MAN1	MAN1
Homo sapiens	RefSeq	NM_173633.1	ILMN_171010	TMEM145	NM_173633.2	NM_173633.2		284339	110556628	NM_173633.2	TMEM145	NP_775904.2	ILMN_1789112	0005490598	S	1699	CGGGGGCCTTCCCTCGGGTCCCTGGCAGAAAGACATTTTACCCCTTCTTG	19	+	42829134-42829183	19q13.2c	Homo sapiens transmembrane protein 145 (TMEM145), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ90805	
Homo sapiens	RefSeq	XM_927863.1	ILMN_137097	LOC644767	XM_927863.1	XM_927863.1		644767	89042181	XM_927863.1	LOC644767	XP_932956.1	ILMN_1669609	0005080437	S	121	GTGGATCAGGCGATCTATGTAAAGCCGCTGATGTGATCTCATCTAGGACA	17	-	47978-47993:49679-49712		PREDICTED: Homo sapiens hypothetical protein LOC644767 (LOC644767), mRNA.					
Homo sapiens	RefSeq	XM_933741.1	ILMN_166632	LOC729973	XM_001131929.1	XM_001131929.1		729973	113404848	XM_001131929.1	LOC729973	XP_001131929.1	ILMN_1666918	0004850360	S	60	GAGGAGCCATAGCAGCAAGGAGTACCTGGAGCTGCACAGGGAGAACTTCC	1	+	27847615-27847664	1p35.3b	PREDICTED: Homo sapiens hypothetical protein LOC729973 (LOC729973), mRNA.					
Homo sapiens	Unigene	Hs.545397	ILMN_108612	HS.545397	Hs.545397		Hs.545397		6838513	AW341872			ILMN_1867352	0000060543	S	211	GGCAGAATGTGTCTTGGGGAAAGGGAGTGGGGCAGATAGGCACATCCCAG	8	-	70447150-70447199		xu29c02.x1 NCI_CGAP_Ov40 Homo sapiens cDNA clone IMAGE:2801570 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001663.2	ILMN_30013	ARF6	NM_001663.2	NM_001663.2		382	6996000	NM_001663.2	ARF6	NP_001654.1	ILMN_1764297	0000510300	S	1331	CCAGCAGAATGGGAATGGGGGAAACACAGCAGTTCTTGGGTAAAAGTCCC	14	+	49431017-49431066	14q22.1b	Homo sapiens ADP-ribosylation factor 6 (ARF6), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 9312003] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8702973] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10913182] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10036235] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [pmid 10913182] [evidence IDA]	The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes [goid 1889] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10036235] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10036235] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 10913182] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [pmid 10036235] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane [goid 30866] [pmid 10913182] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [pmid 10036235] [evidence IDA]; Any process that modulates the frequency, rate or extent of Rac protein signal transduction [goid 35020] [pmid 10036235] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport [goid 48261] [pmid 9312003] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 1993656] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9312003] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 10913182] [evidence TAS]		
Homo sapiens	RefSeq	XM_933969.1	ILMN_37134	LOC646848	XM_933969.1	XM_933969.1		646848	88942899	XM_933969.1	LOC646848	XP_939062.1	ILMN_1676836	0002650343	S	3197	GGCACCGTTGTTGAAAATGAATTCATTGTAGGTGTGTGGGTTTGTTTCTG	1	-	93549615-93549664		PREDICTED: Homo sapiens hypothetical protein LOC646848 (LOC646848), mRNA.					
Homo sapiens	Unigene	Hs.137598	ILMN_77834	HS.137598	Hs.137598		Hs.137598		3645871	AI139899			ILMN_1865069	0000730746	S	447	CAGTCACGTCCCCTCTCAGTTTCAGTTTTCTCATCCAAGGGGTGGGGCGC	9	+	94897490-94897539		qe03b09.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1737881 3, mRNA sequence					
Homo sapiens	RefSeq	XR_017420.2	ILMN_179077	LOC285741	XR_017420.2	XR_017420.2		285741	169169301	XR_017420.2	LOC285741		ILMN_3216336	0002070324	A	8	TCTACCGCGACCTCATCAGCCACGATGAGATGTTTTCCGACATCTACAAG	6	-	144563738-144563787	6q24.2b	PREDICTED: Homo sapiens misc_RNA (LOC285741), miscRNA.					
Homo sapiens	RefSeq	NM_022129.3	ILMN_12388	PBLD	NM_022129.3	NM_022129.3		64081	74316007	NM_022129.3	PBLD	NP_071412.2	ILMN_1699684	0000450209	I	1849	GCATGGGCCATTAAAAATAGCAAACTGAAAACAGTTCATGTGTGGGGGGC	10	-	70043105-70043154	10q21.3d	Homo sapiens phenazine biosynthesis-like protein domain containing (PBLD), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]	Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FLJ14767; MAWDBP; FLJ35507; MAWBP	FLJ14767; MAWDBP; FLJ35507; MAWBP
Homo sapiens	RefSeq	NM_002422.3	ILMN_1300	MMP3	NM_002422.3	NM_002422.3		4314	73808272	NM_002422.3	MMP3	NP_002413.1	ILMN_1784459	0007400400	S	1705	CCTTGTCACATAGAGTGATCTTTCCCAAGAGAAGGGGAAGCACTCGTGTG	11	-	102706601-102706650	11q22.2b	Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase) (MMP3), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3360803] [evidence TAS]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 3360803] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [pmid 3360803] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	STR1; STMY; MGC126102; STMY1; SL-1; MGC126103; MGC126104; MMP-3	STR1; STMY; MGC126102; STMY1; SL-1; MGC126103; MGC126104; MMP-3
Homo sapiens	RefSeq	NM_152342.1	ILMN_19054	CDYL2	NM_152342.2	NM_152342.2		124359	116235486	NM_152342.2	CDYL2	NP_689555.2	ILMN_1777479	0004830487	S	1922	GCACCATGACGGTCCAGGAAGGGGAAGACCACTTTCACATTCTTCTGACT	16	-	80637939-80637988	16q23.2a-q23.2b	Homo sapiens chromodomain protein, Y-like 2 (CDYL2), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	FLJ38866	FLJ38866
Homo sapiens	RefSeq	NM_148961.3	ILMN_165899	OTOS	NM_148961.3	NM_148961.3		150677	42544244	NM_148961.3	OTOS	NP_683764.1	ILMN_1713274	0006860097	S	386	GAGCACGCTGGGCTTCCACGTTCCCTATCAGGAGGACTGAATGGTGTCCA	2	-	241078576-241078586:241078587-241078625	2q37.3e	Homo sapiens otospiralin (OTOS), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]		OTOSP	OTOSP
Homo sapiens	RefSeq	XM_001715443.1	ILMN_348975	LOC257396	XM_001715443.1	XM_001715443.1		257396	169167622	XM_001715443.1	LOC257396	XP_001715495.1	ILMN_3215374	0006580730	A	43	CGCAGATGGGCCGTGGTGGTGAGAGGAAGCAATCAGTATGGAAATGGAGA	5	+	52441512-52441516:52441517-52441561	5q11.2b	PREDICTED: Homo sapiens hypothetical protein LOC257396, transcript variant 2 (LOC257396), mRNA.					
Homo sapiens	RefSeq	XM_001719347.1	ILMN_345546	LOC100129711	XM_001719347.1	XM_001719347.1		100129711	169168860	XM_001719347.1	LOC100129711	XP_001719399.1	ILMN_3188631	0006510242	A	305	GTGACCTGCAAAACAAACAGGGAAATCGCCAACATTACCATCAGCACTGC				6q15d	PREDICTED: Homo sapiens similar to mCG1050952 (LOC100129711), mRNA.					
Homo sapiens	RefSeq	NM_015392.2	ILMN_5190	NPDC1	NM_015392.2	NM_015392.2		56654	20149616	NM_015392.2	NPDC1	NP_056207.2	ILMN_2199313	0001850554	S	755	GACGGCCTCGCCCTTGTGCTGATCCTGGCGTTCTGTGTGGCCGGTGCAGC	9	-	139054976-139055010:139055087-139055101	9q34.3e	Homo sapiens neural proliferation, differentiation and control, 1 (NPDC1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			CAB-; CAB; DKFZP586J0523; CAB1; CAB-1	CAB-; CAB; DKFZP586J0523; CAB1; CAB-1
Homo sapiens	RefSeq	NM_032789.1	ILMN_9871	PARP10	NM_032789.1	NM_032789.1		84875	14249457	NM_032789.1	PARP10	NP_116178.1	ILMN_2262044	0002070059	I	3419	GGCTCTGTTGTTTGAATAAACGTGAACGTGAACCCAGGCGGAAGGGACCC	8	-	145123317-145123366	8q24.3g	Homo sapiens poly (ADP-ribose) polymerase family, member 10 (PARP10), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IEA]		Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	FLJ14464	FLJ14464
Homo sapiens	RefSeq	Hs.363156	ILMN_163477	LOC730877	XM_001129439.1	XM_001129439.1		730877	113423101	XM_001129439.1	LOC730877	XP_001129439.1	ILMN_1833415	0003370735	S	781	GTCCAAATGAGCTGCCTGTGCATCATCAATGTGCGTGGGGAAGAGGGGTG					PREDICTED: Homo sapiens hypothetical protein LOC730877 (LOC730877), mRNA.					
Homo sapiens	RefSeq	XM_936088.1	ILMN_33114	LOC642018	XM_936088.1	XM_936088.1		642018	88998636	XM_936088.1	LOC642018	XP_941181.1	ILMN_2201573	0004290703	S	79	TGCCTTGCCCATTCTGAGCCTCCGCGCCAGCCCATGTATGCCATGGAAAT	6	-	28748489-28748538		PREDICTED: Homo sapiens similar to cytochrome c oxidase subunit VIII (LOC642018), mRNA.					
Homo sapiens	RefSeq	NM_003978.2	ILMN_28119	PSTPIP1	NM_003978.2	NM_003978.2		9051	20149527	NM_003978.2	PSTPIP1	NP_003969.2	ILMN_1703327	0007320747	S	1588	TGGTTCCTACCTGGAGAAGCTTTGAGGAAGGGCCAGGAGCCCCTTCGGAC	15	+	75116548-75116572:75116573-75116597	15q24.3a	Homo sapiens proline-serine-threonine phosphatase interacting protein 1 (PSTPIP1), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9857189] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9857189] [evidence TAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein phosphatase [goid 19903] [evidence IEA]	PSTPIP; CD2BP1L; PAPAS; CD2BP1S; CD2BP1; H-PIP	PSTPIP; PAPAS; CD2BP1S; H-PIP; CD2BP1L; CD2BP1
Homo sapiens	RefSeq	NM_003436.2	ILMN_11596	ZNF135	NM_003436.2	NM_003436.2		7694	34419632	NM_003436.2	ZNF135	NP_003427.2	ILMN_1726368	0002470768	S	2885	GATGGCTTTTGCTGCTCTGTTCTCCCTCTACATTTCTCTGCAGAACTCGC	19	+	63272448-63272497	19q13.43c	Homo sapiens zinc finger protein 135 (ZNF135), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7557990] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7557990] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF61; pT3; pHZ-17; ZNF78L1	ZNF61; pT3; pHZ-17; ZNF78L1
Homo sapiens	RefSeq	NM_213594.1	ILMN_21865	RFX4	NM_213594.1	NM_213594.1		5992	47132526	NM_213594.1	RFX4	NP_998759.1	ILMN_1685168	0004060398	I	20	AAACATCAGGACTTTTGGGGGGCGCCTGTGCTGTCCATGGGAAGAGCATG	12	+	105501182-105501228:105501229-105501231	12q23.3c	Homo sapiens regulatory factor X, 4 (influences HLA class II expression) (RFX4), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	NYD-SP10	NYD-SP10
Homo sapiens	RefSeq	NM_002920.3	ILMN_21865	RFX4	NM_213594.1	NM_213594.1		5992	47132526	NM_213594.1	RFX4	NP_998759.1	ILMN_1773289	0004850743	A	1574	CCGCACCAACCCCTTCACCAGTGCCATCGTTTTCTCCAGCAAAATCTGCC	12	+	105650868-105650917	12q23.3c	Homo sapiens regulatory factor X, 4 (influences HLA class II expression) (RFX4), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	NYD-SP10	NYD-SP10
Homo sapiens	RefSeq	XM_931547.1	ILMN_44778	FLJ00312	XM_931547.1	XM_931547.1		399761	89031116	XM_931547.1	FLJ00312	XP_936640.1	ILMN_1652881	0002350246	I	3896	TAGTCTCTACACTGCTGGCAGAGGCAGGGGATGGGAGCCGGTAGAAAAGA	10	-	48541040-48541089	10q11.22c	PREDICTED: Homo sapiens similar to ARF GTPase-activating protein, transcript variant 5 (FLJ00312), mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NR_002788.1	ILMN_13707	CYP4Z2P	NR_002788.1	NR_002788.1		163720	84872080	NR_002788.1	CYP4Z2P		ILMN_2372543	0006550639	A	984	GGACATGACACCACAACTACTGCTATCTCCTGGATCTTTTACTGCTTGGC	1	-	47333693-47333742	1p33d	Homo sapiens cytochrome P450, family 4, subfamily Z, polypeptide 2 pseudogene (CYP4Z2P), non-coding RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	FLJ40054	FLJ40054
Homo sapiens	RefSeq	XR_000995.1	ILMN_13707	CYP4Z2P	NR_002788.1	NR_002788.1		163720	84872080	NR_002788.1	CYP4Z2P		ILMN_1814883	0001030719	I	2108	CTCATTTTATCCACCCATCCTCCTGCCCCCCAGTTCTGCTGTGGAAATAC	1	-	47324356-47324405	1p33d	Homo sapiens cytochrome P450, family 4, subfamily Z, polypeptide 2 pseudogene (CYP4Z2P), non-coding RNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	FLJ40054	
Homo sapiens	RefSeq	NM_001001665.2	ILMN_163016	CYP27C1	NM_001001665.2	NM_001001665.2		339761	71534268	NM_001001665.2	CYP27C1	NP_001001665.2	ILMN_1657749	0005900601	S	4594	ACTGTGGAAGCAGGGTGGTGAGTGGGGGCTCATGACATTATGCTCTCTAC	2	-	127657923-127657972	2q14.3d	Homo sapiens cytochrome P450, family 27, subfamily C, polypeptide 1 (CYP27C1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ16008	
Homo sapiens	RefSeq	NM_004117.2	ILMN_16562	FKBP5	NM_004117.2	NM_004117.2		2289	17149847	NM_004117.2	FKBP5	NP_004108.1	ILMN_1778444	0002640341	S	3433	CTCAGATGATGCCAGCTGTCTCCCACGTGTGTATTATGGTTCACCAGGGG	6	-	35649634-35649683	6p21.31c-p21.31b	Homo sapiens FK506 binding protein 5 (FKBP5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9001212] [evidence TAS]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9660753] [evidence IPI]; Interacting selectively with the immunosuppressant FK506 [goid 5528] [pmid 9001212] [evidence TAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FKBP54; P54; PPIase; Ptg-10; MGC111006; FKBP51	FKBP54; P54; PPIase; Ptg-10; MGC111006; FKBP51
Homo sapiens	RefSeq	XM_941402.1	ILMN_41260	LOC652078	XM_941402.1	XM_941402.1		652078	89025710	XM_941402.1	LOC652078	XP_946495.1	ILMN_1787344	0001440162	S	85	AAGTGGGGCAACAGGGAGCTCAAGGGCATCAGCGAGTTCTGCGGGTCCAT					PREDICTED: Homo sapiens similar to galectin-related inter-fiber protein (LOC652078), mRNA.					
Homo sapiens	RefSeq	XM_001726256.1	ILMN_335462	LOC100127910	XM_001726256.1	XM_001726256.1		100127910	169162605	XM_001726256.1	LOC100127910	XP_001726308.1	ILMN_3177122	0000830497	A	206	TAGAGCAGACTCTCCCCCACCCCCAAAGGGACTCAGGGATGAAACCAGGA	1	+	168903405-168903454	1q24.2c	PREDICTED: Homo sapiens hypothetical protein LOC100127910 (LOC100127910), mRNA.					
Homo sapiens	RefSeq	NM_019036.2	ILMN_19171	HMGCLL1	NM_019036.2	NM_019036.2		54511	109150426	NM_019036.2	HMGCLL1	NP_061909.2	ILMN_2339192	0003170082	A	1848	TCTGGTTCCAAGAGGCTGTGGCCAATGGCAAGATGCCATATCCTGGAAAC	6	-	55408150-55408199	6p12.1b	Homo sapiens 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 (HMGCLL1), transcript variant 1, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetyl-CoA + acetoacetate [goid 4419] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	DKFZP434G1411; bA418P12.1	DKFZP434G1411; bA418P12.1
Homo sapiens	RefSeq	NM_019036.2	ILMN_19171	HMGCLL1	NM_019036.2	NM_019036.2		54511	109150426	NM_019036.2	HMGCLL1	NP_061909.2	ILMN_2256482	0004280142	I	303	CGATGTCTCTGGCTTCTCAGTCTCCTTGGCAGGCACGGTGGCTTGTATCC	6	-	55549839-55549888	6p12.1b	Homo sapiens 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1 (HMGCLL1), transcript variant 1, mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: (S)-3-hydroxy-3-methylglutaryl-CoA = acetyl-CoA + acetoacetate [goid 4419] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	DKFZP434G1411; bA418P12.1	DKFZP434G1411; bA418P12.1
Homo sapiens	RefSeq	XM_372562.3	ILMN_41022	LOC390564	XM_372562.3	XM_372562.3		390564	89038227	XM_372562.3	LOC390564	XP_372562.3	ILMN_1734580	0000380048	S	4714	AGGGTGAACCGGCAGGCGAGTTACATTTCTGAAAGCCCGGGAAGACAGTA	15	-	28599772-28599821		PREDICTED: Homo sapiens similar to Neuronal acetylcholine receptor protein, beta-4 subunit precursor (LOC390564), mRNA.					
Homo sapiens	RefSeq	NR_015358.1	ILMN_352846	FLJ43390	NR_015358.1	NR_015358.1		646113	168480142	NR_015358.1	FLJ43390		ILMN_3241505	0003610445	S	213	GAGTGGACCCAGCTCACAAGATCTCAGGTAACCATTCATGAGCCTGAGGC	14	+	62584287-62584306:62585409-62585438	14q23.2a	Homo sapiens hypothetical LOC646113 (FLJ43390), non-coding RNA.				FLJ39142; FLJ37214; FLJ18510	FLJ39142; FLJ37214; FLJ18510
Homo sapiens	Unigene	Hs.292419	ILMN_85091	HS.292419	Hs.292419		Hs.292419		21754950	AK095647			ILMN_1840334	0002940220	S	3069	GCCCAGAACTTGGGACCAATACTTAATTCAAATAGCAGGGGCTTGCTCAC	3	+	112927611-112927660		Homo sapiens cDNA FLJ38328 fis, clone FCBBF3025142					
Homo sapiens	RefSeq	NM_007007.1	ILMN_28274	CPSF6	NM_007007.1	NM_007007.1		11052	5901927	NM_007007.1	CPSF6	NP_008938.1	ILMN_1795454	0000270047	S	2941	GCACCTGACTAGCATGTGTTCTTGATTGCAAAATTGGCAGAGGCAGGGTG	12	+	67950813-67950862	12q15c	Homo sapiens cleavage and polyadenylation specific factor 6, 68kDa (CPSF6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any macromolecular complex involved in cleavage or polyadenylation of mRNA molecules [goid 5849] [pmid 9659921] [evidence IDA]; Discrete subnuclear bodies in the interchromatin nucleoplasmic space, often located adjacent to nuclear specks. 10-20 paraspeckles are typically found in human cell nuclei [goid 42382] [pmid 9659921] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 14690600] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 96198064] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15169763] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14561889] [evidence IPI]	HPBRII-4; HPBRII-7; CFIM; CFIM68	HPBRII-4; HPBRII-7; CFIM; CFIM68
Homo sapiens	RefSeq	NM_007333.2	ILMN_25171	KLRC3	NM_007333.2	NM_007333.2		3823	75709176	NM_007333.2	KLRC3	NP_031359.2	ILMN_1781897	0003130468	I	725	TGAGCATAAGCTTTAGAATTAAAGCGCTTGAGCTTGCAGTGCATCAGATA	12	-	10568251-10568300	12p13.2c	Homo sapiens killer cell lectin-like receptor subfamily C, member 3 (KLRC3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A defense response that is mediated by cells [goid 6968] [pmid 9683661] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9683661] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	NKG2E; NKG2-E	NKG2E; NKG2-E
Homo sapiens	RefSeq	NM_005566.1	ILMN_22391	LDHA	NM_005566.1	NM_005566.1		3939	5031856	NM_005566.1	LDHA	NP_005557.1	ILMN_1807106	0003190092	S	1315	CTGGTTAGTGTGAAATAGTTCTGCCACCTCTGACGCACCACTGCCAATGC	11	+	18385623-18385672	11p15.1c	Homo sapiens lactate dehydrogenase A (LDHA), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2434947] [evidence TAS]	 [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA];  [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]; Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [pmid 2334430] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	LDH-M; PIG19; LDH1	LDH-M; PIG19; LDH1
Homo sapiens	RefSeq	NR_030177.1	ILMN_387816	MIR193B	NR_030177.1	NR_030177.1		574455	262205232	NR_030177.1	MIR193B		ILMN_3308048	0002350521	S	21	TGAGGGCGAGATGAGTTTATGTTTTATCCAACTGGCCCTCAAAGTCCCGC				16p13.12a	Homo sapiens microRNA 193b (MIR193B), microRNA.					
Homo sapiens	RefSeq	XM_001723121.1	ILMN_341051	LOC100129269	XM_001723121.1	XM_001723121.1		100129269	169160885	XM_001723121.1	LOC100129269	XP_001723173.1	ILMN_3260111	0004040577	M	1464	GAGTGGCATGTCCAGAGGGCATGGAAGCTCTGTGCCCCTTTTTCACCCTA				1p13.2d	PREDICTED: Homo sapiens hypothetical protein LOC100129269 (LOC100129269), mRNA.					
Homo sapiens	RefSeq	NM_001635.2	ILMN_175048	AMPH	NM_001635.2	NM_001635.2		273	21536405	NM_001635.2	AMPH	NP_001626.1	ILMN_1685834	0000360402	A	2983	CGCTGTGGCTGGAGGTAGGCTAGTTGGGATGGGCAGCTAAGCAGTCTTCT	7	-	38431547-38431596	7p14.1e	Homo sapiens amphiphysin (AMPH), transcript variant 1, mRNA.	Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane [goid 8021] [pmid 1628617] [evidence TAS]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9182667] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs as the result of experience [goid 7612] [evidence IEA]; Invagination of the axonal plasma membrane creating a membrane-bounded vesicle. Without this process the presynaptic terminal would swell up due to fusion of vesicle membranes during neurotransmitter release. The vesicles created may subsequently be used for neurotransmitter storage/release [goid 48488] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 9182667] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9182667] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	AMPH1	AMPH1
Homo sapiens	RefSeq	NM_006353.2	ILMN_163483	HMGN4	NM_006353.2	NM_006353.2		10473	23238232	NM_006353.2	HMGN4	NP_006344.1	ILMN_1700518	0005270689	S	1684	CCTCTGTCTCCAGTATCACCACAAAATTGTTCTTCCTTGGAGTGTCTTGG	6	+	26546880-26546929	6p22.1d	Homo sapiens high mobility group nucleosomal binding domain 4 (HMGN4), mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	MGC5145; NHC; HMG17L3	MGC5145; NHC; HMG17L3
Homo sapiens	RefSeq	NM_001042729.1	ILMN_181026	FGR	NM_001042729.1	NM_001042729.1		2268	112382240	NM_001042729.1	FGR	NP_001036194.1	ILMN_2272519	0006350551	I	18	ACTTAGAGCAAAGGGTGAGAGGGGCAGGTGGGGCTAGGGTGGAGACCAAA	1	-	27953039-27953088	1p35.3b	Homo sapiens Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog (FGR), transcript variant 3, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 2995972] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 3003578] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p58c-fgr; SRC2; c-fgr; FLJ43153; MGC75096; c-src2; p55c-fgr	p58c-fgr; SRC2; c-fgr; FLJ43153; MGC75096; c-src2; p55c-fgr
Homo sapiens	RefSeq	NM_001042729.1	ILMN_181026	FGR	NM_001042729.1	NM_001042729.1		2268	112382240	NM_001042729.1	FGR	NP_001036194.1	ILMN_2368318	0006660475	A	2306	TGGGCCCAGGTTTGAGGGAGAAGGTTGCAGAGCACTTCCCACCTCTCTGA	1	-	27938871-27938920	1p35.3b	Homo sapiens Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog (FGR), transcript variant 3, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 2995972] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 3003578] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p58c-fgr; SRC2; c-fgr; FLJ43153; MGC75096; c-src2; p55c-fgr	p58c-fgr; SRC2; c-fgr; FLJ43153; MGC75096; c-src2; p55c-fgr
Homo sapiens	RefSeq	NM_182688.1	ILMN_26110	UBE2G2	NM_003343.4	NM_003343.4		7327	33359699	NM_003343.4	UBE2G2	NP_003334.2	ILMN_1785179	0002750750	A	2733	ACAATTGCCTGGAGGCTTCTGTGAGATCGGGAGAGGGAGGAGAGGCAGTC	21	-	46189082-46189131	21q22.3d	Homo sapiens ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) (UBE2G2), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9693041] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of unfolded or misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation [goid 30433] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17681147] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBC7	UBC7
Homo sapiens	RefSeq	NM_018357.2	ILMN_25584	LARP6	NM_018357.2	NM_018357.2		55323	37537709	NM_018357.2	LARP6	NP_060827.2	ILMN_1752810	0004830433	I	1895	CAGTGACTGAGCTGTCCTCGATAGGCCATGCAAGGGCTTCCTGAGAGTTC	15	-	71123993-71124042	15q23b	Homo sapiens La ribonucleoprotein domain family, member 6 (LARP6), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ11196; ACHN	FLJ11196; ACHN
Homo sapiens	RefSeq	XM_001132667.2	ILMN_166843	LOC338739	XM_001132667.2	XM_001132667.2		338739	169203400	XM_001132667.2	LOC338739	XP_001132667.2	ILMN_3296816	0006660220	M	323	TCCATGCAGATGGCAGCCCAGCAGGTCACACCAGTCCTTCTGTCCTCACA				11p13d	PREDICTED: Homo sapiens hypothetical protein LOC338739 (LOC338739), mRNA.					
Homo sapiens	RefSeq	NM_172388.1	ILMN_23887	NFATC1	NM_172388.1	NM_172388.1		4772	27502387	NM_172388.1	NFATC1	NP_765976.1	ILMN_2384188	0003800253	A	995	GAAAGGAGAGACGGACATCGGGAGGAAGAACACACGGGTACGGCTGGTGT	18	+	75311993-75312042	18q23d	Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 (NFATC1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8202141] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 14749367] [evidence IDA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8702849] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 14749367] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9506523] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10821850] [evidence TAS]; Interacting selectively with the immunosuppressant FK506 [goid 5528] [pmid 8702849] [evidence TAS]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 14749367] [evidence IDA]	NFATc; MGC138448; NFAT2; NF-ATC	NFATc; MGC138448; NFAT2; NF-ATC
Homo sapiens	RefSeq	NR_003261.1	ILMN_176257	CDRT15P	NR_003261.1	NR_003261.1		94158	117606313	NR_003261.1	CDRT15P		ILMN_2179022	0006380209	S	682	TAGTCCTGGGCACGGTGGCAAACATGCAGGCAGAGAGCAGGGCATTTGGC	17	+	13869221-13869270	17p12b	Homo sapiens CMT1A duplicated region transcript 15 pseudogene (CDRT15P), non-coding RNA.					
Homo sapiens	Unigene	Hs.98960	ILMN_74578	HS.98960	Hs.98960		Hs.98960		10356540	BE894306			ILMN_1858001	0002260575	S	292	AGTCCTGCTGAGTAGCTCTGTGCCCTGGGTGGGGGTTATGAGGAAGGGTT	6	+	4993106-4993155		601437678F1 NIH_MGC_72 Homo sapiens cDNA clone IMAGE:3922723 5, mRNA sequence					
Homo sapiens	RefSeq	NM_000479.2	ILMN_171371	AMH	NM_000479.2	NM_000479.2		268	6138973	NM_000479.2	AMH	NP_000470.1	ILMN_1660995	0003780156	S	1816	CTCATCAGCCTGTCGGAGGAACGCATCAGCGCGCACCACGTGCCCAACAT	19	+	2202879-2202928	19p13.3g	Homo sapiens anti-Mullerian hormone (AMH), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14750901] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 3754790] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process by which the Mullerian ducts, primordia of the oviducts, uterus and upper vagina, undergo regression in male embryos [goid 1880] [pmid 14750901] [evidence NAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 3754790] [evidence TAS]; The process whose specific outcome is the progression of the gonadal mesoderm over time, from its formation to the mature structure. The gonadal mesoderm is the middle layer of the three primary germ layers of the embryo which will go on to form the gonads of the organism [goid 7506] [evidence IEA]; Any process that establishes and transmits the specification of sexual status of an individual organism [goid 7530] [pmid 3754790] [evidence TAS]; The establishment of the sex of an organism by physical differentiation [goid 7548] [pmid 12834017] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 3754790] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	MIF; MIS	MIF; MIS
Homo sapiens	RefSeq	NM_012153.3	ILMN_163676	EHF	NM_012153.3	NM_012153.3		26298	47132617	NM_012153.3	EHF	NP_036285.2	ILMN_1708130	0005090132	S	3354	AGGGGCATCTGCCAATTCTCTCACTGTGGTTCCTTCTCTGACTTTGCCTG	11	+	34639394-34639443	11p13c-p13b	Homo sapiens ets homologous factor (EHF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10644770] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10644770] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10644770] [evidence TAS]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [pmid 10644770] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 10644770] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10644770] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10644770] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	ESE3; ESEJ	ESE3; ESEJ
Homo sapiens	RefSeq	XM_495857.2	ILMN_39622	LOC440013	XM_495854.3	XM_495854.3		440013	113421779	XM_495854.3	LOC440013	XP_495854.2	ILMN_1688434	0004070286	S	109	GGAGGAAAAGCGGTCTTCGGCCTCCGGGAGTAGCGGGACCCCCGCCCTCC	10	+	135329403-135329452	10q26.3f	PREDICTED: Homo sapiens similar to double homeobox 4c (LOC440013), mRNA.					
Homo sapiens	RefSeq	XM_377136.1	ILMN_39622	LOC440013	XM_495854.3	XM_495854.3		440013	113421779	XM_495854.3	LOC440013	XP_495854.2	ILMN_1749546	0005220327	S	2365	GACGCCTCCGCGCGGCAGGGGCAGATGCAAGGCATCCCGGCGCCCTCCCA	10	+	135331659-135331708	10q26.3f	PREDICTED: Homo sapiens similar to double homeobox 4c (LOC440013), mRNA.					
Homo sapiens	RefSeq	XM_495856.2	ILMN_39622	LOC440013	XM_495854.3	XM_495854.3		440013	113421779	XM_495854.3	LOC440013	XP_495854.2	ILMN_1684709	0006420064	S	1637	GAAAGCGGACCGCCGTCACCGGATCCCAGACCGCCCTGCTCCTCCGAGCC	10	+	135330931-135330980	10q26.3f	PREDICTED: Homo sapiens similar to double homeobox 4c (LOC440013), mRNA.					
Homo sapiens	RefSeq	NM_015938.2	ILMN_25169	NMD3	NM_015938.2	NM_015938.2		51068	19923795	NM_015938.2	NMD3	NP_057022.2	ILMN_2232430	0004010048	S	2332	TTGCCAGTTTAGGGCAGTAGCTGCTTTTGTCATAAATATCTTCCTACCAC	3	+	162452093-162452142	3q26.1a	Homo sapiens NMD3 homolog (S. cerevisiae) (NMD3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		CGI-07; FLJ21053	CGI-07; FLJ21053
Homo sapiens	RefSeq	NM_153834.3	ILMN_20238	GPR112	NM_153834.3	NM_153834.3		139378	59710092	NM_153834.3	GPR112	NP_722576.3	ILMN_2115534	0005090601	S	9299	GTGGGTGGTTGCGATTGGATAACTCTTCTGATGGGAGCAGCCGGTGTCAG	X	+	135322162-135322191:135323985-135324004	Xq26.3b	Homo sapiens G protein-coupled receptor 112 (GPR112), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	RP1-299I16; DKFZp781E1948; PGR17	RP1-299I16; DKFZp781E1948; PGR17
Homo sapiens	RefSeq	XR_039899.1	ILMN_334209	LOC644384	XR_039899.1	XR_039899.1		644384	169207224	XR_039899.1	LOC644384		ILMN_3274677	0005090471	M	2	TGGCGTTGAAAGCAAAGAAGGAAGCGCTTGCCCCTCCTAAAGCCGAAGCC				14q13.1c	PREDICTED: Homo sapiens misc_RNA (LOC644384), miscRNA.					
Homo sapiens	Unigene	Hs.562488	ILMN_115581	HS.562488	Hs.562488		Hs.562488		79274144	DA298023			ILMN_1898880	0004200133	S	36	GGGAGCTCTCATACCAGTTCCGTTGTACAAATGCTGAGATTGTTTCAAGG	13	+	52165101-52165150		DA298023 BRHIP2 Homo sapiens cDNA clone BRHIP2011612 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001827.1	ILMN_14702	CKS2	NM_001827.1	NM_001827.1		1164	4502858	NM_001827.1	CKS2	NP_001818.1	ILMN_1756326	0006200468	S	75	TTTCTGCAGCGCGCCACGAGGATGGCCCACAAGCAGATCTACTACTCGGA	9	+	91116007-91116027:91116028-91116056	9q22.2a	Homo sapiens CDC28 protein kinase regulatory subunit 2 (CKS2), mRNA.		Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 2227411] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 15504738] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [pmid 15504738] [evidence NAS]; Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8211159] [evidence TAS]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]	CKSHS2	CKSHS2
Homo sapiens	RefSeq	NM_001827.1	ILMN_14702	CKS2	NM_001827.1	NM_001827.1		1164	4502858	NM_001827.1	CKS2	NP_001818.1	ILMN_2072296	0000780528	S	239	CCAACAGAGTCTAGGCTGGGTTCATTACATGATTCATGAGCCAGAACCAC	9	+	91119989-91120032:91121108-91121113	9q22.2a	Homo sapiens CDC28 protein kinase regulatory subunit 2 (CKS2), mRNA.		Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 2227411] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 15504738] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [pmid 15504738] [evidence NAS]; Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8211159] [evidence TAS]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Modulates the activity of a cyclin-dependent protein kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins [goid 16538] [evidence IEA]	CKSHS2	CKSHS2
Homo sapiens	RefSeq	XM_944186.1	ILMN_46653	LOC648132	XM_944186.2	XM_944186.2		648132	113423749	XM_944186.2	LOC648132	XP_949279.1	ILMN_1696661	0000990706	A	519	CTTATTCCGCAAGTACATTGCCTATAGGCTGATCCAGTATGCCAGGAACA					PREDICTED: Homo sapiens hypothetical LOC648132, transcript variant 2 (LOC648132), mRNA.					
Homo sapiens	RefSeq	NR_030163.1	ILMN_387795	MIR488	NR_030163.1	NR_030163.1		574441	262205158	NR_030163.1	MIR488		ILMN_3308778	0001030162	S	9	CTCTCCCAGATAATGGCACTCTCAAACAAGTTTCCAAATTGTTTGAAAGG				1q25.2a	Homo sapiens microRNA 488 (MIR488), microRNA.					
Homo sapiens	RefSeq	NR_002208.1	ILMN_16797	MRPL42P5	NR_002208.1	NR_002208.1		359821	62632761	NR_002208.1	MRPL42P5		ILMN_2042343	0001340431	S	499	CGTGGACATTAGCACAGATGTCAGAAGAAACCGGAACCTCCAGAAGACAG	15	-	40824201-40824250	15q15.1b	Homo sapiens mitochondrial ribosomal protein L42 pseudogene 5 (MRPL42P5), non-coding RNA.					
Homo sapiens	Unigene	Hs.50571	ILMN_72936	HS.50571	Hs.50571		Hs.50571		27824756	BX091227			ILMN_1817651	0000380431	S	237	GGCCTAGGGGACAGTTGGGTGGGAAAGCTCGATGTGAACCACTTTGACAC	5	+	170663063-170663112		BX091227 Soares_fetal_lung_NbHL19W Homo sapiens cDNA clone IMAGp998E13670 ; IMAGE:299508, mRNA sequence					
Homo sapiens	RefSeq	NM_005861.2	ILMN_162417	STUB1	NM_005861.2	NM_005861.2		10273	56181386	NM_005861.2	STUB1	NP_005852.2	ILMN_1756126	0004900431	S	1055	TTTCTCAGGTGGATGAGAAGAGGAAGAAGCGAGACATCCCCGACTACCTG	16	+	672052-672077:672166-672189	16p13.3f	Homo sapiens STIP1 homology and U-box containing protein 1 (STUB1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10330192] [evidence IDA]; Any complex that possesses ubiquitin conjugating enzyme activity [goid 31371] [pmid 16307917] [evidence TAS]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 15781469] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 16307917] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of SMAD signaling proteins by ubiquitination and targeting to the proteasome [goid 30579] [pmid 15781469] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [pmid 11146632] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids [goid 31943] [pmid 11146632] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32436] [pmid 11146632] [evidence IDA]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [pmid 16307917] [evidence TAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 16307917] [evidence TAS]; Stops, prevents or reduces the activity of the Hsp90 molecular chaperone [goid 10546] [pmid 11146632] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Stops, prevents or reduces the activity of chaperones of the Hsp70/Hsc70 class [goid 30191] [pmid 10330192] [evidence IDA]; Interacting selectively with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size [goid 30544] [pmid 10330192] [evidence IDA]; Interacting selectively with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size [goid 30544] [pmid 16307917] [evidence TAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 16307917] [evidence TAS]; Interacting selectively with a tetratricopeptide repeat (TPR) domain of a protein, the consensus sequence of which is defined by a pattern of small and large hydrophobic amino acids and a structure composed of helices [goid 30911] [pmid 11146632] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 15781469] [evidence IDA]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [pmid 16307917] [evidence TAS]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [pmid 11146632] [evidence IDA]	CHIP; SDCCAG7; NY-CO-7; UBOX1; HSPABP2	SDCCAG7; NY-CO-7; UBOX1; HSPABP2; CHIP
Homo sapiens	RefSeq	NM_005861.2	ILMN_162417	STUB1	NM_005861.2	NM_005861.2		10273	56181386	NM_005861.2	STUB1	NP_005852.2	ILMN_2157421	0001850445	S	1162	ACCTACGACCGCAAGGACATCGAGGAGCACCTGCAGCGTGTGGGTCATTT	16	+	672247-672282:672365-672378	16p13.3f	Homo sapiens STIP1 homology and U-box containing protein 1 (STUB1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10330192] [evidence IDA]; Any complex that possesses ubiquitin conjugating enzyme activity [goid 31371] [pmid 16307917] [evidence TAS]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 15781469] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 16307917] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of SMAD signaling proteins by ubiquitination and targeting to the proteasome [goid 30579] [pmid 15781469] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31398] [pmid 11146632] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving glucocorticoids [goid 31943] [pmid 11146632] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome [goid 32436] [pmid 11146632] [evidence IDA]; The process leading to the attainment of the full functional capacity of a protein [goid 51604] [pmid 16307917] [evidence TAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 16307917] [evidence TAS]; Stops, prevents or reduces the activity of the Hsp90 molecular chaperone [goid 10546] [pmid 11146632] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Stops, prevents or reduces the activity of chaperones of the Hsp70/Hsc70 class [goid 30191] [pmid 10330192] [evidence IDA]; Interacting selectively with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size [goid 30544] [pmid 10330192] [evidence IDA]; Interacting selectively with Hsp70 proteins, any of a group of heat shock proteins around 70kDa in size [goid 30544] [pmid 16307917] [evidence TAS]; Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [pmid 16307917] [evidence TAS]; Interacting selectively with a tetratricopeptide repeat (TPR) domain of a protein, the consensus sequence of which is defined by a pattern of small and large hydrophobic amino acids and a structure composed of helices [goid 30911] [pmid 11146632] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 15781469] [evidence IDA]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [pmid 16307917] [evidence TAS]; Interacting selectively with Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size [goid 51879] [pmid 11146632] [evidence IDA]	CHIP; SDCCAG7; NY-CO-7; UBOX1; HSPABP2	SDCCAG7; NY-CO-7; UBOX1; HSPABP2; CHIP
Homo sapiens	RefSeq	NM_004710.3	ILMN_2554	SYNGR2	NM_004710.3	NM_004710.3		9144	52352813	NM_004710.3	SYNGR2	NP_004701.1	ILMN_1789011	0001690719	S	1560	GGCTTTATGGAACTTGTAGTTTGAACAAGGCAGTGGCAATCCGCCCCCTC	17	+	73680470-73680519	17q25.3b	Homo sapiens synaptogyrin 2 (SYNGR2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9760194] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC102914	MGC102914
Homo sapiens	RefSeq	NM_002197.1	ILMN_9544	ACO1	NM_002197.1	NM_002197.1		48	8659554	NM_002197.1	ACO1	NP_002188.1	ILMN_1750800	0002450608	S	3289	CCTTTTCCTTCAGAGTGAATCATCCAGACTCCTCATGGATAGGTCGGGTG	9	+	32440622-32440671	9p21.1a	Homo sapiens aconitase 1, soluble (ACO1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1738601] [evidence NAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16144863] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 16144863] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16527810] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle [goid 6101] [pmid 16527810] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: citrate = cis-aconitate + H2O = isocitrate; i.e. the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate [goid 3994] [evidence IEA]; Interacting selectively with the iron-responsive element, a regulatory sequence found in the 5'- and 3'-untranslated regions of mRNAs encoding many iron-binding proteins [goid 30350] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1903202] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 1946430] [evidence IDA]; Catalysis of the reaction: citrate = cis-aconitate + H2O = isocitrate; i.e. the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate [goid 3994] [pmid 1946430] [evidence IDA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	IREBP; IRP1; IREB1	IREBP; IRP1; IREB1
Homo sapiens	RefSeq	NM_175931.1	ILMN_15020	CBFA2T3	NM_175931.1	NM_175931.1		863	28872804	NM_175931.1	CBFA2T3	NP_787127.1	ILMN_1720616	0005900747	I	80	AGTCGTGGAGGCGGGGACCAAGCTGGAAGGAGCAGCGACTCCCGGACCGA	16	-	89007479-89007528	16q24.3a	Homo sapiens core-binding factor, runt domain, alpha subunit 2; translocated to, 3 (CBFA2T3), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9447981] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZMYND4; MTGR2; MTG16; ETO2	ZMYND4; MTGR2; MTG16; ETO2
Homo sapiens	RefSeq	NM_018660.2	ILMN_162666	ZNF395	NM_018660.2	NM_018660.2		55893	46249380	NM_018660.2	ZNF395	NP_061130.1	ILMN_1772876	0001980403	S	4314	ATTTAGTGCCCAGGGAGTCCAGCGAATGACGTCTGTGGCCAAGCGAGGTC	8	-	28259459-28259508	8p21.1d	Homo sapiens zinc finger protein 395 (ZNF395), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14625278] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14625278] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 14625278] [evidence IC ]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 14625278] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PRF1; DKFZp434K1210; PBF; PRF-1; HDBP2; Si-1-8-14	PRF1; DKFZp434K1210; PBF; PRF-1; HDBP2; Si-1-8-14
Homo sapiens	RefSeq	NM_002837.2	ILMN_8351	PTPRB	NM_002837.2	NM_002837.2		5787	18491009	NM_002837.2	PTPRB	NP_002828.2	ILMN_1672102	0000160711	S	5833	GCAGTGCACGACCTAAGACTTCACAGGGTTCACATGGTCCAGACTGAGTG	12	-	69204636-69204638:69212082-69212128	12q15d	Homo sapiens protein tyrosine phosphatase, receptor type, B (PTPRB), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2170109] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 2170109] [evidence TAS]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA];  [goid 5001] [pmid 2170109] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12907755] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HPTP-BETA; R-PTP-BETA; HPTPB; DKFZp686E2262; MGC142023; PTPB; MGC59935; DKFZp686H15164; FLJ44133	HPTP-BETA; R-PTP-BETA; HPTPB; DKFZp686E2262; MGC142023; PTPB; MGC59935; DKFZp686H15164; FLJ44133
Homo sapiens	RefSeq	NM_198399.1	ILMN_12850	ARPP-21	NM_198399.1	NM_198399.1		10777	38261964	NM_198399.1	ARPP-21	NP_938409.1	ILMN_2251505	0006370551	I	136	CAACTGACAGGAGCTTGGGAGCTCGGGAGCTTGGGAGAGGGCTTATGTTT	3	+	35697568-35697617	3p22.3a	Homo sapiens cyclic AMP-regulated phosphoprotein, 21 kD (ARPP-21), transcript variant 2, mRNA.				FLJ32997	FLJ32997
Homo sapiens	RefSeq	NM_001102575.1	ILMN_351534	SNX18	NM_001102575.1	NM_001102575.1		112574	157057544	NM_001102575.1	SNX18	NP_001096045.1	ILMN_3229340	0006400035	A	1221	TCGAGGAGGACTTCATCTCTAAGCGCAGGAAGGGCCTGATCTGGTGGATG	5	+	53814813-53814862	5q11.2d	Homo sapiens sorting nexin 18 (SNX18), transcript variant 1, mRNA.	A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14679214] [evidence IPI]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	FLJ32560; FLJ11997; MGC150829; SNX18; MGC150827; SH3PX2; SH3PXD3B	FLJ32560; FLJ11997; MGC150829; SNX18; MGC150827; SH3PX2; SH3PXD3B
Homo sapiens	RefSeq	NM_130846.1	ILMN_29308	PTPRR	NM_130846.1	NM_130846.1		5801	19743916	NM_130846.1	PTPRR	NP_570897.1	ILMN_1669172	0006420273	I	135	CAGTTTGAGAAGCAGCTCTGGCAGCGGGGGGTGTAGGTGTGTTGCACTAC	12	-	71148181-71148230	12q15d	Homo sapiens protein tyrosine phosphatase, receptor type, R (PTPRR), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [pmid 10601328] [evidence IEP]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 7836467] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 5001] [pmid 7836467] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence ISS]	PTPBR7; DKFZp781C1038; EC-PTP; MGC148170; FLJ34328; PTPRQ; PCPTP1; PTP-SL; MGC131968	DKFZp781C1038; EC-PTP; MGC148170; MGC131968; PTPBR7; FLJ34328; PTPRQ; PCPTP1; PTP-SL
Homo sapiens	RefSeq	NM_002997.4	ILMN_169032	SDC1	NM_001006946.1	NM_001006946.1		6382	55749479	NM_001006946.1	SDC1	NP_001006947.1	ILMN_1815308	0006590592	A	3134	ACTGCGACTTTCTGCCTGGAGTGTATGACTGCACATGACTCGGGGGTGGG	2	-	20400667-20400716	2p24.1d	Homo sapiens syndecan 1 (SDC1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2324102] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence IEA]	syndecan; SDC; CD138; SYND1	syndecan; SDC; CD138; SYND1
Homo sapiens	RefSeq	NM_004577.3	ILMN_14445	PSPH	NM_004577.3	NM_004577.3		5723	46249387	NM_004577.3	PSPH	NP_004568.2	ILMN_1776105	0003800520	S	1264	GATGGTGCCACAGATATGGAAGCCTGTCCTCCTGCTGATGCTTTCATTGG	7	-	56086453-56086502	7p11.2b	Homo sapiens phosphoserine phosphatase (PSPH), mRNA.		The chemical reactions and pathways resulting in the formation of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6564] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate [goid 4647] [pmid 9188776] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PSP	PSP
Homo sapiens	RefSeq	NM_004577.3	ILMN_14445	PSPH	NM_004577.3	NM_004577.3		5723	46249387	NM_004577.3	PSPH	NP_004568.2	ILMN_2147114	0000870753	S	1900	GCTTGGGCCACCGCGCCCAGCCAATGTCCTAGAGAGTTTTGTGATCTGAA	7	-	56079350-56079399	7p11.2b	Homo sapiens phosphoserine phosphatase (PSPH), mRNA.		The chemical reactions and pathways resulting in the formation of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6564] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: L(or D)-O-phosphoserine + H2O = L(or D)-serine + phosphate [goid 4647] [pmid 9188776] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PSP	PSP
Homo sapiens	RefSeq	XM_001718985.1	ILMN_333958	LOC730351	XM_001718985.1	XM_001718985.1		730351	169171259	XM_001718985.1	LOC730351	XP_001719037.1	ILMN_3220532	0000160753	A	2375	TTCATCTAGCTGAAAAATTTAAACCAAACAATGACAATTTTAAATAAAAA				7p22.2a	PREDICTED: Homo sapiens hypothetical LOC730351 (LOC730351), mRNA.					
Homo sapiens	Unigene	Hs.4986	ILMN_70827	HS.4986	Hs.4986		Hs.4986		21754157	AK094982			ILMN_1911213	0002680504	S	2713	CGTCAATCACATTACTTTGACCCAGATGTGCAGAACCCCTTTCTACCTGC	15	-	29555233-29555282		Homo sapiens cDNA FLJ37663 fis, clone BRHIP2011120					
Homo sapiens	RefSeq	NM_000347.4	ILMN_20717	SPTB	NM_000347.4	NM_000347.4		6710	67782318	NM_000347.4	SPTB	NP_000338.3	ILMN_1782845	0005390747	A	6284	AAGAACGCCAGATTGCAGAGAGACCCGCAGAGGAGACTGGGCCTCAAGAG	14	-	65233509-65233519:65234021-65234059	14q23.3a	Homo sapiens spectrin, beta, erythrocytic (SPTB), transcript variant 2, mRNA.	Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Membrane associated dimeric protein (240 and 220 kDa) of erythrocytes. Forms a complex with ankyrin, actin and probably other components of the membrane cytoskeleton, so that there is a mesh of proteins underlying the plasma membrane, potentially restricting the lateral mobility of integral proteins [goid 8091] [pmid 8226774] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 10867799] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16060676] [evidence IDA]	The binding of a protein or protein complex to the barbed (or plus) end of an actin filament, thus preventing the addition, exchange or removal of further actin subunits [goid 51016] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16060676] [evidence IPI]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 16060676] [evidence IDA]	HSpTB1	HSpTB1
Homo sapiens	Unigene	Hs.561625	ILMN_114989	HS.561625	Hs.561625		Hs.561625		6701336	AW294700			ILMN_1877317	0006130707	S	533	TCGAGCTATTGCAGAAGACAGAAATCAGCTGCCGCGGGCGTGGGTGTGTG	6	+	73386986-73387035		UI-H-BW0-aim-a-09-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2729752 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005492.2	ILMN_7399	CST8	NM_005492.2	NM_005492.2		10047	19882257	NM_005492.2	CST8	NP_005483.1	ILMN_1765103	0000060288	S	841	AGCAATGGCAGGTGGGAGGCTCTTCCCAATGTGCTTTCTTCATGCATGCC	20	+	23424606-23424655	20p11.21c	Homo sapiens cystatin 8 (cystatin-related epididymal specific) (CST8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [pmid 1280328] [evidence TAS]	CRES	CRES
Homo sapiens	RefSeq	NM_014699.2	ILMN_1055	ZNF646	NM_014699.2	NM_014699.2		9726	41281440	NM_014699.2	ZNF646	NP_055514.2	ILMN_1675479	0004760039	S	5739	CCCCAGTGGCCTGCAGACCTCAGCTTCTCCCTCTGAACTTCAAGTCTCCA	16	+	31001890-31001914:31001915-31001939	16p11.2c	Homo sapiens zinc finger protein 646 (ZNF646), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	KIAA0296	KIAA0296
Homo sapiens	RefSeq	NM_031476.1	ILMN_7921	CRISPLD2	NM_031476.2	NM_031476.2		83716	142374443	NM_031476.2	CRISPLD2	NP_113664.1	ILMN_1790689	0004180079	S	4222	ACGGCGTTCCTGGCTCTCCTGCCCACAGGATGAACATTTTCGGCTTCCTT	16	+	83500275-83500324	16q24.1a	Homo sapiens cysteine-rich secretory protein LCCL domain containing 2 (CRISPLD2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the vesicles of the constitutive secretory pathway, which carry cargo from the endoplasmic reticulum to the Golgi, between Golgi cisternae, and to destinations within or outside the cell [goid 30133] [pmid 11256614] [evidence IDA]			DKFZP434B044; MGC74865; CRISP11; LCRISP2	DKFZP434B044; MGC74865; CRISP11; LCRISP2
Homo sapiens	Unigene	Hs.541820	ILMN_105952	HS.541820	Hs.541820		Hs.541820		4740813	AI656834			ILMN_1816501	0006660661	S	305	TCAAACAGGAAGTAGCAGGTGTCTGGGGTATAGGCAGTGAAATAATCGCC	2	-	115066310-115066359		tt54d05.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2244585 3, mRNA sequence					
Homo sapiens	RefSeq	NM_173075.2	ILMN_182709	APBB2	NM_173075.2	NM_173075.2		323	50083290	NM_173075.2	APBB2	NP_775098.2	ILMN_1716790	0000990392	S	4276	ATGAAGTACCGAGAGGCTAAACCCACTGGCCTAAGATCTCACCAAAGTTC	4	-	40511234-40511283	4p14a-p13d	Homo sapiens amyloid beta (A4) precursor protein-binding, family B, member 2 (Fe65-like) (APBB2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8855266] [evidence NAS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence ISS]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence ISS]	The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence ISS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 8855266] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence ISS]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of S phase of mitotic cell cycle activity [goid 45749] [evidence ISS]	Interacting selectively with beta-amyloid peptide/protein and/or its precursor [goid 1540] [evidence ISS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence ISS]	FE65L; FE65L1; MGC35575	FE65L; FE65L1; MGC35575
Homo sapiens	Unigene	Hs.536664	ILMN_103121	HS.536664	Hs.536664		Hs.536664		9868706	AV647692			ILMN_1846249	0006060601	S	89	GCAGCAAATCCCAAACAAATGCACTTCAGTGCCAGCAGGAGGCGCATCGC	3	+	121022674-121022723		AV647692 GLC Homo sapiens cDNA clone GLCBBA02 3, mRNA sequence					
Homo sapiens	RefSeq	XR_042369.1	ILMN_338561	LOC644517	XR_042369.1	XR_042369.1		644517	169166513	XR_042369.1	LOC644517		ILMN_3231314	0007610019	I	1627	AGAAGAAATCAGGGCCAACCACAGCTTCCCCGGTCACAGAACCAATTCAT	4	+	9314280-9314329	4p16.1b	PREDICTED: Homo sapiens misc_RNA (LOC644517), miscRNA.					
Homo sapiens	RefSeq	NM_017514.2	ILMN_162939	PLXNA3	NM_017514.2	NM_017514.2		55558	59710103	NM_017514.2	PLXNA3	NP_059984.2	ILMN_1719972	0004150132	S	6481	TCCTCCTGAGCCTACTGCCAAACGTCCTCAGTGTTGTCTGCACCTGCTCC	X	+	153354914-153354963	Xq28g	Homo sapiens plexin A3 (PLXNA3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8570614] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8570614] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IEA]; The progression of a pyramidal neuron from its initial formation to its mature state [goid 21860] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of axon extension involved in axon guidance [goid 48843] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a lower concentration, in a concentration gradient of a specific chemical [goid 50919] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 8570614] [evidence NAS]	XAP-6; HSSEXGENE; PLEXIN-A3; PLXN4; SEX; PLXN3; 6.3	XAP-6; PLEXIN-A3; SEX; PLXN3; 6.3; HSSEXGENE; PLXN4
Homo sapiens	RefSeq	NM_003502.2	ILMN_24847	AXIN1	NM_003502.2	NM_003502.2		8312	31083149	NM_003502.2	AXIN1	NP_003493.1	ILMN_1692967	0005550398	I	2418	GCCGGTGCTGCACGTGGTACCAGCCGTGTCGGACATGGAGCTCTCCGAGA	16	-	341289-341297:342370-342410	16p13.3f	Homo sapiens axin 1 (AXIN1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12072559] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12072559] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16753179] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11955436] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12000790] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12820959] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15327769] [evidence EXP]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 12072559] [evidence IDA]; A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome [goid 30877] [pmid 16188939] [evidence IDA]; A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome [goid 30877] [pmid 9601641] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The establishment, maintenance and elaboration of an axis in the oocyte [goid 7309] [pmid 9230313] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46330] [evidence ISS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [pmid 9601641] [evidence IC ]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9230313] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9601641] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12192039] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9601641] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12192039] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9601641] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	AXIN; MGC52315	AXIN; MGC52315
Homo sapiens	RefSeq	XM_294019.4	ILMN_161955	ECT2L	NM_001077706.1	NM_001077706.1		345930	118150677	NM_001077706.1	ECT2L	NP_001071174.1	ILMN_1706193	0006660239	A	2564	GCCCTGCTCGTTTCTAGTCGGGGCACATCTCACACTCCATTTGAGAGGAC	6	+	139203996-139204008:139205809-139205845	6q24.1a	Homo sapiens epithelial cell transforming sequence 2 oncogene-like (ECT2L), mRNA.				dJ509I19.3; LFDH; dJ509I19.2	
Homo sapiens	RefSeq	NM_001005500.1	ILMN_179466	OR4M1	NM_001005500.1	NM_001005500.1		441670	53828711	NM_001005500.1	OR4M1	NP_001005500.1	ILMN_2064090	0001580113	S	648	GTCCTATGCCTTCCTTCTGGCCTTGCTCAAGAAACATTCAGGCTCAGGTG	14	+	19318969-19319018	14q11.2a	Homo sapiens olfactory receptor, family 4, subfamily M, member 1 (OR4M1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR14-7	OR14-7
Homo sapiens	RefSeq	NM_198969.1	ILMN_25658	AES	NM_001130.5	NM_001130.5		166	39811997	NM_001130.5	AES	NP_001121.2	ILMN_1712944	0001230458	A	1274	AGTTCCAGACACCTCCACGCCCACCTGGTCCTCTCCCATCGCCCACAAAA	19	-	3053260-3053309	19p13.3f	Homo sapiens amino-terminal enhancer of split (AES), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8365415] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9809752] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11390640] [evidence IPI]	AES-2; ESP1; GRG5; GRG; TLE5; AES-1	AES-2; ESP1; GRG5; GRG; TLE5; AES-1
Homo sapiens	RefSeq	XM_946200.1	ILMN_139329	LAD1	XM_946200.1	XM_946200.1		3898	88952629	XM_946200.1	LAD1	XP_951293.1	ILMN_1664065	0003990139	I	266	ATTTGAGGTAGGAGCAGCCATGTGGAGAGCTCACGGTGGCAGGCTGGGAG				1q32.1c	PREDICTED: Homo sapiens ladinin 1, transcript variant 4 (LAD1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9119369] [evidence TAS]		
Homo sapiens	RefSeq	NM_032826.3	ILMN_19120	SLC35B4	NM_032826.3	NM_032826.3		84912	54792143	NM_032826.3	SLC35B4	NP_116215.1	ILMN_1697959	0006380553	S	6356	AGATGACTCTTGTGAACCAAAGAGAGCAGTAGTGGTTATTCCCCGGCGCA	7	-	133625015-133625064	7q33a-q33b	Homo sapiens solute carrier family 35, member B4 (SLC35B4), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15911612] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of nucleotide-sugars into, out of, within or between cells. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 15780] [evidence IEA]; The directed movement of UDP-N-acetylglucosamine into, out of, within or between cells. N-acetylglucosamine is a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 15788] [pmid 15911612] [evidence IDA]; The directed movement of UDP-xylose into, out of, within or between cells. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate [goid 15790] [pmid 15911612] [evidence IDA]	Catalysis of the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative [goid 5338] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a UDP-N-acetylglucosamine from one side of the membrane to the other. N-acetylglucosamine is a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate [goid 5462] [pmid 15911612] [evidence IDA]; Catalysis of the transfer of UDP-xylose from one side of the membrane to the other. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate [goid 5464] [pmid 15911612] [evidence IDA]	YEA; FLJ14697; YEA4	YEA; FLJ14697; YEA4
Homo sapiens	RefSeq	NM_003541.2	ILMN_29808	HIST1H4K	NM_003541.2	NM_003541.2		8362	15718726	NM_003541.2	HIST1H4K	NP_003532.1	ILMN_1662359	0000610014	S	61	AAAGTACTGCGCGACAATATCCAGGGCATCACCAAGCCGGCCATCCGGCG	6	-	27907174-27907223	6p22.1c	Homo sapiens histone cluster 1, H4k (HIST1H4K), mRNA.				dJ160A22.1; H4/d; H4FD; H4F2iii	dJ160A22.1; H4/d; H4FD; H4F2iii
Homo sapiens	RefSeq	NM_018999.1	ILMN_138576	KIAA1128	NM_018999.1	NM_018999.1		54462	24308130	NM_018999.1	KIAA1128	NP_061872.1	ILMN_1742124	0002190224	S	6579	CTGGCTCTAGGGCACTGGGGATGTACTTTGAAATCACCGAACAGGCTTGC	10	+	86267604-86267653	10q23.1c	Homo sapiens KIAA1128 (KIAA1128), mRNA.				FLJ14262; bA486O22.1	FLJ14262; bA486O22.1
Homo sapiens	RefSeq	NM_033513.1	ILMN_26744	C19ORF20	NM_033513.1	NM_033513.1		91978	46195752	NM_033513.1	C19orf20	NP_277048.1	ILMN_1663349	0002630730	S	1362	AGCTGGGCAGATGGTAGTGACATTGGTGAGACAACAGCCCTAACACTTCC	19	+	470959-471008	19p13.3j	Homo sapiens chromosome 19 open reading frame 20 (C19orf20), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; Long whiplike or feathery structures borne either singly or in groups by the motile cells of many bacteria and unicellular eukaryotes and by the motile male gametes of many eukaryotic organisms, which propel the cell through a liquid medium [goid 19861] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The assembly and organization of the sperm flagellar axoneme, the bundle of microtubules and associated proteins that forms the core of the eukaryotic sperm flagellum, and is responsible for movement [goid 7288] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Behavior in a fully developed and mature organism [goid 30534] [evidence IEA]		GTRGEO22	GTRGEO22
Homo sapiens	RefSeq	NM_016299.1	ILMN_6364	HSPA14	NM_016299.2	NM_016299.2		51182	82880657	NM_016299.2	HSPA14	NP_057383.2	ILMN_1797318	0006660497	S	1397	GGACTCCTTTGCCAGCTCGAAGACAACACACATTGCAAGCCCCTGGAAGC	10	+	14909784-14909833	10p13c	Homo sapiens heat shock 70kDa protein 14 (HSPA14), transcript variant 1, mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	HSP70-4; HSP70L1; MGC131990	HSP70-4; HSP70L1
Homo sapiens	RefSeq	XM_001732891.1	ILMN_353223	LOC100133803	XM_001732891.1	XM_001732891.1		100133803	169160752	XM_001732891.1	LOC100133803	XP_001732943.1	ILMN_3220331	0004640373	A	67	CAAGTCTGGTCTCAAGATGGAGGTAAAACTGCTGCCGGTTGCCCCCAGCC					PREDICTED: Homo sapiens similar to mCG50656 (LOC100133803), mRNA.					
Homo sapiens	RefSeq	XM_937944.1	ILMN_39072	LOC399746	XM_937944.1	XM_937944.1		399746	89061420	XM_937944.1	LOC399746	XP_943037.1	ILMN_1706287	0002900202	A	1028	CACCTAGTGCATGAGGCACAGGGCAGAGTCATTTCAGTAAAAGCCTGTCT				10p11.1d	PREDICTED: Homo sapiens similar to ARP3 actin-related protein 3 homolog B (LOC399746), mRNA.					
Homo sapiens	RefSeq	XM_938846.1	ILMN_178249	TMEM151	XM_001133285.1	XM_001133285.1		256472	113422999	XM_001133285.1	TMEM151	XP_001133285.1	ILMN_1675767	0001980280	I	2735	TGGTTCAGGGCACGATGAGGGGTTCTGGGAAGGGACTCAGAATTGGGCTC				11q13.1e	PREDICTED: Homo sapiens transmembrane protein 151 (TMEM151), mRNA.					
Homo sapiens	RefSeq	XM_372769.3	ILMN_183138	LOC391013	XM_001129563.1	XM_001129563.1		391013	113411976	XM_001129563.1	LOC391013	XP_001129563.1	ILMN_1659370	0003450070	S	245	TGAACAGCTACCAGTTCCACATCGTCAATGGCGCAGTGGTTTGTGAGTAG				1p36.12b	PREDICTED: Homo sapiens similar to Group IIC secretory phospholipase A2 precursor (Phosphatidylcholine 2-acylhydrolase GIIC) (GIIC sPLA2) (PLA2-8) (14 kDa phospholipase A2) (LOC391013), mRNA.					
Homo sapiens	RefSeq	NM_016167.3	ILMN_29287	NOL7	NM_016167.3	NM_016167.3		51406	15743546	NM_016167.3	NOL7	NP_057251.2	ILMN_1803853	0001820470	S	662	GTTCCTGTCTCTTGCCAACAAGAGGTTACCAGTGAAAAGAGCTGCTGTCC	6	+	13620647-13620696	6p23b	Homo sapiens nucleolar protein 7, 27kDa (NOL7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			RARG-1; dJ223E5.2; MGC71933; C6orf90	RARG-1; dJ223E5.2; MGC71933; C6orf90
Homo sapiens	RefSeq	XM_379234.3	ILMN_34100	LOC401101	XM_379234.3	XM_379234.3		401101	88965991	XM_379234.3	LOC401101	XP_379234.1	ILMN_1813714	0005390598	S	168	GCTTAGAGAACCGAAAGGTGCAGAGCTTTAAAGGATTATGGAGTCTGAAG	3	+	178642576-178642592:178739877-178739909		PREDICTED: Homo sapiens hypothetical LOC401101 (LOC401101), mRNA.					
Homo sapiens	RefSeq	NM_020232.3	ILMN_18069	PSMG2	NM_020232.3	NM_020232.3		56984	39725705	NM_020232.3	PSMG2	NP_064617.2	ILMN_2088410	0004260022	S	437	CTGCAGCTTCGTAGTACTCCCTTCCGGTACCTACTTACACCTTCCATGCA	18	+	12706554-12706603	18p11.21d	Homo sapiens proteasome (prosome, macropain) assembly chaperone 2 (PSMG2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]	The aggregation, arrangement and bonding together of a mature, active proteasome complex [goid 43248] [pmid 16251969] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16251969] [evidence IPI]	MGC15092; TNFSF5IP1; HCCA3; HsT1707; PAC2; MDS003; CLAST3	MGC15092; HCCA3; HsT1707; PAC2; TNFSF5IP1; MDS003; CLAST3
Homo sapiens	RefSeq	XM_933823.1	ILMN_44850	LOC23117	XM_933823.1	XM_933823.1		23117	89040005	XM_933823.1	LOC23117	XP_938916.1	ILMN_1749836	0004250037	I	466	GGCTCTGTTGGAATCCGCATAGTGTGGAAATGAGTTTGCCCTGGAAAGGG	16	-	21762461-21762510	16p12.2a	PREDICTED: Homo sapiens KIAA0220-like protein, transcript variant 10 (LOC23117), mRNA.					
Homo sapiens	RefSeq	NM_006707.2	ILMN_9927	BTNL3	NM_006707.2	NM_006707.2		10917	37574625	NM_006707.2	BTNL3	NP_006698.1	ILMN_1663749	0005890523	I	747	CTCCCACACATGGTTCTCCCGGGTCCCTCCCTGATCCACAGTTTGAGCCT	5	+	180363503-180363552	5q35.3g	Homo sapiens butyrophilin-like 3 (BTNL3), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10429365] [evidence TAS]		BTNLR	BTNLR
Homo sapiens	RefSeq	NM_199453.1	ILMN_169113	HTR4	NM_001040169.1	NM_001040169.1		3360	94421453	NM_001040169.1	HTR4	NP_001035259.1	ILMN_1676350	0002760575	I	1244	CACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATAC	5	-	147889482-147889531	5q33.1a	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 4 (HTR4), transcript variant a, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16102731] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9276448] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 9603189] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 16102731] [evidence IDA]	5-HT4; 5-HT4R	5-HT4
Homo sapiens	RefSeq	NM_199453.1	ILMN_169113	HTR4	NM_001040169.1	NM_001040169.1		3360	94421453	NM_001040169.1	HTR4	NP_001035259.1	ILMN_1786080	0004900296	A	1036	GGCAGGTGTGGACTGCTTTCCTCTGGCTCGGCTATATCAATTCCGGGTTG	5	-	147902858-147902907	5q33.1a	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 4 (HTR4), transcript variant a, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16102731] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9276448] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 9603189] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 16102731] [evidence IDA]	5-HT4; 5-HT4R	5-HT4
Homo sapiens	RefSeq	NM_021057.2	ILMN_27442	IFNA7	NM_021057.2	NM_021057.2		3444	71143134	NM_021057.2	IFNA7	NP_066401.2	ILMN_2186745	0003190519	S	415	GGAGGTTGGGGTGGAAGAGACTCCCCTGATGAATGAGGACTTCATCCTGG	9	-	21201740-21201789	9p21.3d	Homo sapiens interferon, alpha 7 (IFNA7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2995168] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2995168] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 2995168] [evidence TAS]	Interacting selectively with the interferon-alpha/beta receptor [goid 5132] [pmid 2995168] [evidence TAS]	IFNA-J	IFNA-J
Homo sapiens	RefSeq	NM_021057.2	ILMN_27442	IFNA7	NM_021057.2	NM_021057.2		3444	71143134	NM_021057.2	IFNA7	NP_066401.2	ILMN_1776023	0001230626	S	2	ACCCACCTCAGGTAGCCTAGTGATATTTGCAAAATCCCAATGGCCCGGTC	9	-	21202153-21202164:21202165-21202202	9p21.3d	Homo sapiens interferon, alpha 7 (IFNA7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2995168] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2995168] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 2995168] [evidence TAS]	Interacting selectively with the interferon-alpha/beta receptor [goid 5132] [pmid 2995168] [evidence TAS]	IFNA-J	IFNA-J
Homo sapiens	RefSeq	NM_198215.2	ILMN_12549	FAM13C1	NM_198215.2	NM_198215.2		220965	50897855	NM_198215.2	FAM13C1	NP_937858.2	ILMN_2409055	0003130537	A	863	CTTCAGCCAAAGCCAGAGATTCAACTTAGACCCCGAGTCAGCCCCATCTC	10	-	60699687-60699736	10q21.1f	Homo sapiens family with sequence similarity 13, member C1 (FAM13C1), transcript variant 1, mRNA.				MGC33233	MGC33233
Homo sapiens	RefSeq	NM_198215.2	ILMN_12549	FAM13C1	NM_198215.2	NM_198215.2		220965	50897855	NM_198215.2	FAM13C1	NP_937858.2	ILMN_2295280	0005690220	I	1222	TGTGTGAGCAACCCACAGTCCCCAGAGAAAATGGGAAACCGGAAGCTGCG	10	-	60692296-60692345	10q21.1f	Homo sapiens family with sequence similarity 13, member C1 (FAM13C1), transcript variant 1, mRNA.				MGC33233	MGC33233
Homo sapiens	RefSeq	NM_004725.2	ILMN_166956	BUB3	NM_004725.2	NM_004725.2		9184	56550116	NM_004725.2	BUB3	NP_004716.1	ILMN_2245180	0004540338	I	2281	CTTGGTGTAAGTCTGAACCCATCTTTTGAAATGTATTTTCTTCATTGCAG	10	+	124914503-124914552	10q26.13c	Homo sapiens BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) (BUB3), transcript variant 1, mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 9660858] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 9660858] [evidence TAS]; A signal transduction-based surveillance mechanism that ensures accurate chromosome replication and segregation by preventing progression through a mitotic cell cycle until conditions are suitable for the cell to proceed to the next stage [goid 7093] [pmid 9660858] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9660858] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11283619] [evidence IPI]	BUB3L; hBUB3	BUB3L; hBUB3
Homo sapiens	RefSeq	XM_943517.1	ILMN_38033	LOC648089	XM_938331.2	XM_938331.2		648089	113417212	XM_938331.2	LOC648089	XP_943424.1	ILMN_1733879	0007380008	S	213	CTCCAGAGCCTGGTCGGCTTAGCCCTGCTTTCCGCCTCACTCGTTGAGCA					PREDICTED: Homo sapiens similar to membrane-associated ring finger (C3HC4) 3, transcript variant 1 (LOC648089), mRNA.					
Homo sapiens	RefSeq	XM_934745.1	ILMN_39800	LOC400221	XM_934745.1	XM_934745.1		400221	89037332	XM_934745.1	LOC400221	XP_939838.1	ILMN_1776956	0003890091	I	534	GGCTGGTCTTGAACTTCTGACCTCAGTGGCTTCTAGAAGAGTGAGTCTGG	14	+	61193299-61193324:61194076-61194099	14q23.1c	PREDICTED: Homo sapiens hypothetical LOC400221, transcript variant 2 (LOC400221), mRNA.					
Homo sapiens	RefSeq	NM_139021.1	ILMN_13601	MAPK15	NM_139021.2	NM_139021.2		225689	95147355	NM_139021.2	MAPK15	NP_620590.2	ILMN_1768506	0006480451	S	1744	CTCCTGCACCCCTTAGCCCTCCCTGCTTTGCCTGGCCCGTTGAAGTTCCA	8	+	144804489-144804538	8q24.3g	Homo sapiens mitogen-activated protein kinase 15 (MAPK15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11875070] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11875070] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 11875070] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 11875070] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11875070] [evidence IC ]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [pmid 11875070] [evidence NAS]	ERK7; ERK8	ERK7; ERK8
Homo sapiens	RefSeq	XM_001127014.1	ILMN_175807	LOC730743	XM_001127014.1	XM_001127014.1		730743	113427410	XM_001127014.1	LOC730743	XP_001127014.1	ILMN_3247132	0006130477	S	89	GCCAGACCAGCTCCTGCGGAACCGGCTGTGGCATTGGTGGTGGCATTGGC					PREDICTED: Homo sapiens similar to keratin associated protein 1.6 (LOC730743), mRNA.					
Homo sapiens	RefSeq	XM_371878.4	ILMN_162097	FLJ14712	XM_371878.5	XM_371878.5		221806	113418402	XM_371878.5	FLJ14712	XP_371878.5	ILMN_1699275	0002570010	A	2775	GGCAGATGCATATTTCCCAATGTGTGTTCCTGCCGCACTGAATACTCTGG	7	-	12339640-12339689	7p21.3a	PREDICTED: Homo sapiens hypothetical protein FLJ14712 (FLJ14712), mRNA.					
Homo sapiens	RefSeq	NM_005520.1	ILMN_4782	HNRPH1	NM_005520.1	NM_005520.1		3187	5031752	NM_005520.1	HNRPH1	NP_005511.1	ILMN_2101920	0000540725	S	1419	ATAGGTAACCAAGGAGCAGTGAACAGCAGCTACTACAGTAGTGGAAGCCG	5	-	178974513-178974562	5q35.3d	Homo sapiens heterogeneous nuclear ribonucleoprotein H1 (H) (HNRPH1), mRNA.				DKFZp686A15170; HNRPH; hnRNPH	DKFZp686A15170; HNRPH; hnRNPH
Homo sapiens	RefSeq	NM_005520.1	ILMN_4782	HNRPH1	NM_005520.1	NM_005520.1		3187	5031752	NM_005520.1	HNRPH1	NP_005511.1	ILMN_2101928	0006350343	S	1763	AGTTCCAGCTTTTCTCAAGTTAGTTATAGGATGTACTTAAGCAGTAAGCG	5	-	178974169-178974218	5q35.3d	Homo sapiens heterogeneous nuclear ribonucleoprotein H1 (H) (HNRPH1), mRNA.				DKFZp686A15170; HNRPH; hnRNPH	DKFZp686A15170; HNRPH; hnRNPH
Homo sapiens	RefSeq	NM_006142.3	ILMN_12370	SFN	NM_006142.3	NM_006142.3		2810	45238846	NM_006142.3	SFN	NP_006133.1	ILMN_1806607	0003710040	S	1118	CTCTGATCGTAGGAATTGAGGAGTGTCCCGCCTTGTGGCTGAGAACTGGA	1	+	27063337-27063386	1p36.11a	Homo sapiens stratifin (SFN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8515476] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10767298] [evidence TAS]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [pmid 11574543] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein kinase activity [goid 6469] [pmid 8515476] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8515476] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10767298] [evidence TAS]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 11574543] [evidence IDA]; The intracellular signaling cascade that results when a cell is triggered to undergo apoptosis [goid 8632] [pmid 11574543] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 11574543] [evidence IDA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [evidence IEA]	Stops, prevents or reduces the activity of protein kinase C, an enzyme which phosphorylates a protein [goid 8426] [pmid 8515476] [evidence TAS]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]	YWHAS	YWHAS
Homo sapiens	RefSeq	XM_942262.1	ILMN_308693	USP22	NM_015276.1	NM_015276.1		23326	150010638	NM_015276.1	USP22	NP_056091.1	ILMN_1666609	0002680086	A	3506	CTTGGCAATCACAGCCCGCAGAACCATCATGTGTGGCAGAAGCCTGAGGG	17	-	20904570-20904619	17p11.2b	Homo sapiens ubiquitin specific peptidase 22 (USP22), mRNA.	A large multiprotein complex that possesses histone acetyltransferase activity and is involved in regulation of transcription. The budding yeast complex includes Gcn5p, several proteins of the Spt and Ada families, and several TBP-associate proteins (TAFs); analogous complexes in other species have analogous compositions, and usually contain homologs of the yeast proteins [goid 124] [pmid 18206973] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18206973] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 16378762] [evidence NAS]; The modification of histones by removal of ubiquitin groups [goid 16578] [pmid 18206973] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [pmid 18206973] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [pmid 18206973] [evidence IMP]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the addition of an acetyl group to a histone, specific for histones H4 [goid 10485] [pmid 18206973] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1063; USP3L	
Homo sapiens	RefSeq	NM_172207.1	ILMN_29266	CAMKK1	NM_172207.2	NM_172207.2		84254	148806858	NM_172207.2	CAMKK1	NP_757344.2	ILMN_1715372	0004730386	I	2384	CTCCCCAAGCCTGTGCGCCTCGTCCTCAGCAGATCCACCTTCTTCACTAT	17	-	3768475-3768524	17p13.2c	Homo sapiens calcium/calmodulin-dependent protein kinase kinase 1, alpha (CAMKK1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp761M0423; CAMKKA; MGC34095	DKFZp761M0423; CAMKKA; MGC34095
Homo sapiens	RefSeq	NM_001013632.2	ILMN_20436	TCTEX1D4	NM_001013632.2	NM_001013632.2		343521	62899058	NM_001013632.2	TCTEX1D4	NP_001013654.1	ILMN_1774476	0004250296	S	480	GATCCACTTGTTCTAAAACACAGCAGGTCCATGGCCAGCAGGCCTCTGCC	1	-	45272320-45272340:45272341-45272347:45272456-45272477	1p34.1d	Homo sapiens Tctex1 domain containing 4 (TCTEX1D4), mRNA.					
Homo sapiens	RefSeq	NM_144685.3	ILMN_22684	HIPK4	NM_144685.3	NM_144685.3		147746	34222353	NM_144685.3	HIPK4	NP_653286.2	ILMN_1715659	0004810156	S	2297	GTGCCTGCACACCTCTCCTAAACACAGCAGGGCTTTGGAGTCTGGCCCAT	19	-	45577123-45577172	19q13.2b	Homo sapiens homeodomain interacting protein kinase 4 (HIPK4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ32818	FLJ32818
Homo sapiens	RefSeq	XM_001724965.1	ILMN_344530	LOC100129268	XM_001724965.1	XM_001724965.1		100129268	169161808	XM_001724965.1	LOC100129268	XP_001725017.1	ILMN_3263940	0001500092	M	1206	CCAGCTGAGCCTTGGATCAACTCTGCTAGATACCACATCTCTAGGGCCCC				1q22a	PREDICTED: Homo sapiens hypothetical protein LOC100129268 (LOC100129268), mRNA.					
Homo sapiens	RefSeq	NM_022640.2	ILMN_8482	CSH1	NM_022640.2	NM_022640.2		1442	20819960	NM_022640.2	CSH1	NP_072166.1	ILMN_1691937	0000580224	I	674	CCAAGAGAACTCACCTTATTCTTCATTTCGCCTGGTGAATCCTCCAGGCC	17	-	61972681-61972730	17q23.3b	Homo sapiens chorionic somatomammotropin hormone 1 (placental lactogen) (CSH1), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 593368] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1378436] [evidence NAS]; The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 1378436] [evidence TAS]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	CSMT; CSA; PL	CSMT; CSA; PL
Homo sapiens	RefSeq	NM_022754.4	ILMN_16398	SFXN1	NM_022754.4	NM_022754.4		94081	40255158	NM_022754.4	SFXN1	NP_073591.2	ILMN_2205935	0004730411	S	2135	CTGTAGATGTTTAACGTCATAGACAGTTGGCCCTCTGTATCCGTGAGCTC	5	+	174887440-174887489	5q35.2c	Homo sapiens sideroflexin 1 (SFXN1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]	Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	FLJ12876	FLJ12876
Homo sapiens	RefSeq	XM_925896.1	ILMN_167196	LOC728825	XM_001128769.1	XM_001128769.1		728825	113430051	XM_001128769.1	LOC728825	XP_001128769.1	ILMN_1667970	0007100014	S	35	TGCGCGCACCCTCTGCCCTGGTCCATCGCTGCCGCCTCCTTCTTCTGCAG	X	-	114859890-114859939	Xq23d	PREDICTED: Homo sapiens similar to SMT3 suppressor of mif two 3 homolog 2 (LOC728825), mRNA.					
Homo sapiens	RefSeq	NM_148675.2	ILMN_10658	DSCR9	NM_148675.3	NM_148675.3		257203	115392134	NM_148675.3	DSCR9	NP_683516.1	ILMN_1785896	0004390468	S	1309	CCTGAACAGGAAGCGGAAGCAGGAAGGAACTGAGAACACCAGCATCTGCT	21	+	37515572-37515621	21q22.13a	Homo sapiens Down syndrome critical region gene 9 (DSCR9), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	NR_024403.1	ILMN_371885	LOC730101	NR_024403.1	NR_024403.1		730101	212276032	NR_024403.1	LOC730101		ILMN_3305735	0002260239	M	3532	AGGCAACAAACCACAGCAGTATTAGTACCTGTGTCTCTGTCATCACTAGG	6	+	52533699-52533748		Homo sapiens hypothetical LOC730101 (LOC730101), transcript variant 1, non-coding RNA.					
Homo sapiens	RefSeq	XM_933388.1	ILMN_46201	LOC652100	XM_945203.1	XM_945203.1		652100	89034636	XM_945203.1	LOC652100	XP_950296.1	ILMN_1667979	0002690138	S	61	AATGCCATGTGTCTGTATGCCAAGTCTATCAAAGTCCTCAAAAAGGCCAA					PREDICTED: Homo sapiens hypothetical LOC652100 (LOC652100), mRNA.					
Homo sapiens	RefSeq	XM_937327.1	ILMN_43860	LOC648274	XM_937327.1	XM_937327.1		648274	88978865	XM_937327.1	LOC648274	XP_942420.1	ILMN_1695746	0005310438	S	1226	GTAAGAGAATCCATACTGGATGTGGAAAAGCCTTTAAGCTGTACTCCAGC					PREDICTED: Homo sapiens similar to zinc finger protein 595 (LOC648274), mRNA.					
Homo sapiens	RefSeq	NM_016252.2	ILMN_169765	BIRC6	NM_016252.3	NM_016252.3		57448	153792693	NM_016252.3	BIRC6	NP_057336.3	ILMN_1801605	0000020601	S	15559	GAGGCTCTGTAGAGGAGAGAGGATGTACCTCTCTGGTGCTGTTACAGTAC	2	+	32640506-32640555	2p22.3e	Homo sapiens baculoviral IAP repeat-containing 6 (BIRC6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10544019] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA];  [goid 4869] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18329369] [evidence IPI]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ13726; KIAA1289; BRUCE; APOLLON; FLJ13786	FLJ13726; KIAA1289; BRUCE; APOLLON; FLJ13786
Homo sapiens	RefSeq	NM_024063.1	ILMN_4249	SPATA5L1	NM_024063.1	NM_024063.1		79029	13129039	NM_024063.1	SPATA5L1	NP_076968.1	ILMN_1729179	0007400619	S	2045	CCATGCCAATAGGGCCTGATGTCTCCTTAGAAAACCTCGCAGCAGAAACC	15	+	43498081-43498130	15q21.1a	Homo sapiens spermatogenesis associated 5-like 1 (SPATA5L1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC5347; FLJ12286	MGC5347; FLJ12286
Homo sapiens	RefSeq	NM_080745.3	ILMN_34242	TRIM69	NM_080745.3	NM_080745.3		140691	88999602	NM_080745.3	TRIM69	NP_542783.2	ILMN_2381834	0001470025	A	858	CAGCTCACCCAAATCTGGTGCTCTCCAAAAGCCAAACCAGCGTCTGGCAT	15	+	42846751-42846800	15q21.1a	Homo sapiens tripartite motif-containing 69 (TRIM69), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF36; Trif; HSD34	Trif; HSD34; RNF36
Homo sapiens	RefSeq	XM_001721999.1	ILMN_337634	LOC100128035	XM_001721999.1	XM_001721999.1		100128035	169165542	XM_001721999.1	LOC100128035	XP_001722051.1	ILMN_3179562	0004260408	A	1028	GGGCGAGTCCCTAGAGTTACGCAGATGAAGGACATTGGCCCTCGAGAATC				3q13.2a	PREDICTED: Homo sapiens similar to VGSA5840 (LOC100128035), mRNA.					
Homo sapiens	RefSeq	XM_001721999.1	ILMN_337634	LOC100128035	XM_001721999.1	XM_001721999.1		100128035	169165542	XM_001721999.1	LOC100128035	XP_001722051.1	ILMN_3256024	0006650369	M	1457	GGTGGTTTGCAGCACCCATCAACCCTTCATCTAGGTTTTAAGCTCCGCAT				3q13.2a	PREDICTED: Homo sapiens similar to VGSA5840 (LOC100128035), mRNA.					
Homo sapiens	RefSeq	NM_016108.2	ILMN_22004	AIG1	NM_016108.2	NM_016108.2		51390	40316940	NM_016108.2	AIG1	NP_057192.2	ILMN_1797974	0003940056	S	762	CAAGTCTAAACGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCC	6	+	143499806-143499820:143527912-143527946	6q24.2a	Homo sapiens androgen-induced 1 (AIG1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ10485; dJ95L4.1; RP1-95L4.1; DKFZp686F03136; AIG-1	FLJ10485; RP1-95L4.1; DKFZp686F03136; dJ95L4.1; AIG-1
Homo sapiens	RefSeq	NM_021238.1	ILMN_169499	LOC650369	XR_018848.1	XR_018848.1		650369	113427966	XR_018848.1	LOC650369		ILMN_1683664	0001690465	S	2918	CCCCTTCCACCTCTCTTTGCCTGTAGGATGTACTGTATGTAGTCATGCAC					PREDICTED: Homo sapiens similar to family with sequence similarity 60, member A (LOC650369), mRNA.					L4; TERA; C12orf14
Homo sapiens	RefSeq	NM_002443.2	ILMN_12478	MSMB	NM_002443.2	NM_002443.2		4477	20302156	NM_002443.2	MSMB	NP_002434.1	ILMN_1699243	0005900368	I	179	CTCGGAGTGGCAGACTGACAACTGTGAGACATGCACTTGCTACGAAACAG	10	+	51226794-51226843	10q11.23b	Homo sapiens microseminoprotein, beta- (MSMB), transcript variant PSP94, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7566962] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7566962] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MSP; PRPS; MSPB; PN44; IGBF; PSP94; PSP57; PSP-94; PSP	MSPB; IGBF; MSP; PRPS; PN44; PSP94; PSP57; PSP-94; PSP
Homo sapiens	RefSeq	NM_002443.2	ILMN_12478	MSMB	NM_002443.2	NM_002443.2		4477	20302156	NM_002443.2	MSMB	NP_002434.1	ILMN_1790906	0003190110	A	319	TCGTGGTGGAGAAGAAGGACCCAAAAAAGACCTGTTCTGTCAGTGAATGG	10	+	51232348-51232397	10q11.23b	Homo sapiens microseminoprotein, beta- (MSMB), transcript variant PSP94, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7566962] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7566962] [evidence TAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MSP; PRPS; MSPB; PN44; IGBF; PSP94; PSP57; PSP-94; PSP	MSPB; IGBF; MSP; PRPS; PN44; PSP94; PSP57; PSP-94; PSP
Homo sapiens	RefSeq	NM_201574.1	ILMN_6553	SLC4A3	NM_201574.1	NM_201574.1		6508	42415528	NM_201574.1	SLC4A3	NP_963868.1	ILMN_1810346	0000580176	I	90	AGAGGCCGGACGGCAGTCGCGGCTGCGCTCGGGAGAGAGCGCGGGGGACA	2	+	220200616-220200665	2q35f	Homo sapiens solute carrier family 4, anion exchanger, member 3 (SLC4A3), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7923606] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7923606] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA];  [goid 5452] [pmid 7923606] [evidence TAS]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]	SLC2C; AE3	SLC2C; AE3
Homo sapiens	RefSeq	XM_931228.1	ILMN_38862	LOC648364	XM_943291.1	XM_943291.1		648364	88999277	XM_943291.1	LOC648364	XP_948384.1	ILMN_1673339	0001440692	S	270	CGTGAAGGCAGGTGTTCCGGGGAGAAACGTGGAAGGGAGGCGCGGCCTGG					PREDICTED: Homo sapiens hypothetical LOC648364 (LOC648364), mRNA.					
Homo sapiens	RefSeq	NM_002926.2	ILMN_161894	RGS12	NM_002926.3	NM_002926.3		6002	108773791	NM_002926.3	RGS12	NP_002917.1	ILMN_1722834	0004070215	I	6147	CCCTCCATCCGTCTTGGTGGACACCTGTGTGGCTCTCACCTGCGTTTTGA	4	+	3387560-3387609	4p16.2c	Homo sapiens regulator of G-protein signaling 12 (RGS12), transcript variant 2, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 10869340] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 9651375] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	 [goid 5057] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9651375] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 5057] [evidence IEA]	DKFZp761K1817; DKFZp761K1617	DKFZp761K1817; DKFZp761K1617
Homo sapiens	Unigene	Hs.180848	ILMN_80685	HS.180848	Hs.180848		Hs.180848		18499626	BM450586			ILMN_1856274	0007550019	S	345	GCGAGTTCTGTATGGTTGCTCCAAGTGAGGGTGAGAGTAGAGAAATCAGG	5	-	60482498-60482547		AGENCOURT_6394441 NIH_MGC_67 Homo sapiens cDNA clone IMAGE:5494253 5, mRNA sequence					
Homo sapiens	RefSeq	NR_031684.1	ILMN_388735	MIR302F	NR_031684.1	NR_031684.1		100302131	269847426	NR_031684.1	MIR302F		ILMN_3309939	0004780471	S	1	CTGTGTAAACCTGGCAATTTTCACTTAATTGCTTCCATGTTTATAAAAGA					Homo sapiens microRNA 302f (MIR302F), microRNA.					
Homo sapiens	RefSeq	XM_001720562.1	ILMN_334132	LOC728755	XM_001720562.1	XM_001720562.1		728755	169207222	XM_001720562.1	LOC728755	XP_001720614.1	ILMN_3297118	0006480039	M	314	TCAGGACTCACAGAAGTCGATGAGCAGAACACAGAAGACTCAACCTGAAG				14q12b-q12c	PREDICTED: Homo sapiens similar to hCG1984907 (LOC728755), mRNA.					
Homo sapiens	RefSeq	NM_178154.1	ILMN_12324	FUT8	NM_178156.1	NM_178156.1		2530	30410727	NM_178156.1	FUT8	NP_835369.1	ILMN_1741422	0003870497	A	3195	GAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCCTTACTCTGAGG	14	+	65279249-65279298	14q23.3a	Homo sapiens fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (FUT8), transcript variant 3, mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 11698403] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [pmid 11698403] [evidence NAS]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [pmid 11698403] [evidence TAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [pmid 9133635] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of L-fucose (6-deoxy-Lgalactose) [goid 42355] [pmid 11698403] [evidence NAS]; The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43112] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms [goid 7585] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; The chemical reactions and pathways involving a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43112] [evidence IEA]	Catalysis of the reaction: GDP-L-fucose + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-N-acetyl-beta-D-glucosaminyl}asparagine = GDP + N4-{N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,3)-[N-acetyl-beta-D-glucosaminyl-(1,2)-alpha-D-mannosyl-(1,6)]-beta-D-mannosyl-(1,4)-N-acetyl-beta-D-glucosaminyl-(1,4)-[alpha-L-fucosyl-(1,6)]-N-acetyl-beta-D-glucosaminyl}asparagine [goid 8424] [pmid 11698403] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of an L-fucosyl group from GDP-beta-L-fucose to an acceptor molecule to form an alpha(1,6)-linkage [goid 46921] [evidence IEA]	MGC26465	MGC26465
Homo sapiens	RefSeq	NM_173209.1	ILMN_28395	TGIF1	NM_173209.1	NM_173209.1		7050	28178850	NM_173209.1	TGIF1	NP_775301.1	ILMN_1656761	0007160670	I	1	GTTTCTGGACCCGGCCACCCCCCGCGTCCGCACCGCCGCCCCCGAGGGAC	18	+	3439973-3440022	18p11.31e	Homo sapiens TGFB-induced factor homeobox 1 (TGIF1), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10764806] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8537382] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8537382] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10764806] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HPE4; MGC5066; MGC39747; TGIF	HPE4; MGC5066; MGC39747; TGIF
Homo sapiens	RefSeq	NM_145307.2	ILMN_28497	RTKN2	NM_145307.2	NM_145307.2		219790	26190613	NM_145307.2	RTKN2	NP_660350.2	ILMN_1740606	0004560747	S	6087	CCCCAGAGCTTAAGCCACTGCAGTAAATTAGGTACGTAGGATATTCAGTC	10	-	63953457-63953506	10q21.2b	Homo sapiens rhotekin 2 (RTKN2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]		DKFZp686J10120; bA531F24.1; RTKN2	bA531F24.1; DKFZp686J10120; RTKN2
Homo sapiens	RefSeq	NM_018106.2	ILMN_180191	ZDHHC4	NM_018106.2	NM_018106.2		55146	21361700	NM_018106.2	ZDHHC4	NP_060576.1	ILMN_1683544	0001980711	S	1455	CTCTGAAGTCCTGGTGTCAAGGGGATCAAGAGATGACTTCTCAGAGGTTC	7	+	6595266-6595315	7p22.1a	Homo sapiens zinc finger, DHHC-type containing 4 (ZDHHC4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ10479; ZNF374	FLJ10479; ZNF374
Homo sapiens	RefSeq	NM_198532.1	ILMN_29950	C19ORF35	NM_198532.1	NM_198532.1		374872	38348367	NM_198532.1	C19orf35	NP_940934.1	ILMN_1674926	0002490142	S	2177	CGCGCCCCCAAGCATTTGTGTAGGCTGTTCCCTCTGCCATACTGTTCCAG	19	-	2225968-2226017	19p13.3g	Homo sapiens chromosome 19 open reading frame 35 (C19orf35), mRNA.				FLJ45778	FLJ45778
Homo sapiens	RefSeq	NM_033303.2	ILMN_22599	ADRA1A	NM_033303.3	NM_033303.3		148	111118985	NM_033303.3	ADRA1A	NP_150646.3	ILMN_1709167	0004590215	I	2210	CACCATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGC	8	-	26721982-26722031	8p21.2a	Homo sapiens adrenergic, alpha-1A-, receptor (ADRA1A), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8396931] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of heart contraction as a result of the baroreceptor response to increased blood pressure [goid 1985] [evidence IEA]; A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure [goid 1994] [evidence IEA]; The process by which the presence of epinephrine or norepinephrine in the bloodstream activates, maintains or increases the rate of heart contraction [goid 1996] [evidence IEA]; Any process that increases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the presence of epinephrine or norepinephrine in the bloodstream or released from the nerve endings [goid 1997] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10671514] [evidence TAS]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 8183249] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8396931] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10860850] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [evidence IEA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10671514] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8396931] [evidence TAS]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10860850] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; The increase in size or mass of an organ. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that function together as to perform a specific function [goid 35265] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade [goid 43410] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 4935] [evidence IEA];  [goid 4937] [evidence IEA];  [goid 4937] [pmid 9490024] [evidence NAS];  [goid 4937] [pmid 7737411] [evidence TAS]	ADRA1C; ALPHA1AAR; ADRA1L1	ADRA1C; ALPHA1AAR; ADRA1L1
Homo sapiens	RefSeq	NM_000110.2	ILMN_19002	DPYD	NM_000110.3	NM_000110.3		1806	119943097	NM_000110.3	DPYD	NP_000101.2	ILMN_1795715	0000670273	S	3794	TCCCCTTCGCTGAAATTGCTTATTTTTGGTGTTGGATAGAGGATAGGGAG	1	-	97787716-97787765	1p21.3b	Homo sapiens dihydropyrimidine dehydrogenase (DPYD), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1512248] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8083224] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9348115] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine [goid 6145] [pmid 11988088] [evidence IMP]; The chemical reactions and pathways resulting in the formation of pyrimidine bases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors [goid 6207] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base [goid 6210] [pmid 10410956] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA [goid 6212] [pmid 18075467] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of uracil, 2,4-dioxopyrimidine, one of the pyrimidine bases occurring in RNA, but not in DNA [goid 6212] [pmid 1512248] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of thymidine, deoxyribosylthymine thymine 2-deoxyriboside, a deoxynucleoside very widely distributed but occurring almost entirely as phosphoric esters in deoxynucleotides and deoxyribonucleic acid, DNA [goid 6214] [pmid 1512248] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]; Catalysis of the reaction: (S)-dihydroorotate + O2 = orotate + H2O2 [goid 4158] [evidence IEA]; Catalysis of the reaction: 5,6-dihydrouracil + NAD+ = uracil + NADH + H+ [goid 4159] [pmid 8083224] [evidence EXP]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 5,6-dihydrouracil + NADP+ = uracil + NADPH + H+ [goid 17113] [pmid 11988088] [evidence IMP]; Catalysis of the reaction: 5,6-dihydrouracil + NADP+ = uracil + NADPH + H+ [goid 17113] [pmid 8083224] [evidence EXP]; Catalysis of the reaction: 5,6-dihydrouracil + NADP+ = uracil + NADPH + H+ [goid 17113] [pmid 1512248] [evidence IDA]; Catalysis of the reaction: 5,6-dihydrouracil + NADP+ = uracil + NADPH + H+ [goid 17113] [evidence ISS]; Catalysis of the reaction: 5,6-dihydrouracil + NADP+ = uracil + NADPH + H+ [goid 17113] [pmid 18075467] [evidence IDA]; Catalysis of the reaction: 5,6-dihydrouracil + NADP+ = uracil + NADPH + H+ [goid 17113] [pmid 10410956] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 1512248] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence ISS]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence ISS]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	MGC132008; DPD; DHP; MGC70799	DPD; MGC70799; MGC132008; DHP
Homo sapiens	RefSeq	NM_002488.3	ILMN_5263	NDUFA2	NM_002488.3	NM_002488.3		4695	142381010	NM_002488.3	NDUFA2	NP_002479.1	ILMN_3243890	0006840189	S	194	ACGTGGAGCTGAAGAAGGCGAATCCCGACCTACCCATCCTAATCCGCGAA	5	-	140026877-140026926	5q31.3b	Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa (NDUFA2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 17209039] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	B8; CD14	B8; CD14
Homo sapiens	RefSeq	NM_006308.1	ILMN_26717	HSPB3	NM_006308.1	NM_006308.1		8988	5453687	NM_006308.1	HSPB3	NP_006299.1	ILMN_1720710	0006560577	S	637	CGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTAC	5	+	53752081-53752130	5q11.2d	Homo sapiens heat shock 27kDa protein 3 (HSPB3), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 9858786] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 8972725] [evidence TAS]		HSPL27	HSPL27
Homo sapiens	RefSeq	NM_006056.2	ILMN_8283	NMUR1	NM_006056.3	NM_006056.3		10316	142348529	NM_006056.3	NMUR1	NP_006047.2	ILMN_1729287	0001400348	S	2872	GCTCCCTGCCGAGAAAGTGGAGGACGTGGTACAGGGTTGCAGATGTTTAG	2	-	232096493-232096542	2q37.1b	Homo sapiens neuromedin U receptor 1 (NMUR1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10899166] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9782091] [evidence TAS]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 10899166] [evidence IDA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence ISS]; The directed movement of chloride into, out of, within or between cells [goid 6821] [pmid 10899166] [evidence IDA]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [pmid 10899166] [evidence IEP]; A process whereby force is generated within smooth muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length [goid 6939] [evidence ISS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 10899166] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 10899166] [evidence TAS]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [pmid 10899166] [evidence IEP]; The sequential electrochemical polarization and depolarization that travels across the membrane of a nerve cell (neuron) in response to stimulation [goid 19226] [evidence ISS]; A series of molecular signals in which a cell uses calcium ions to convert an extracellular signal into a response [goid 19722] [pmid 10899166] [evidence IDA]; A series of molecular signals in which a cell uses a water-soluble inositol phosphate to convert an extracellular signal into a response [goid 48016] [pmid 10899166] [evidence IDA]	Combining with neuromedin U to initiate a change in cell activity [goid 1607] [evidence ISS]; Combining with neuromedin U to initiate a change in cell activity [goid 1607] [pmid 10899166] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	GPR66; NMU1R; FM3; (FM-3); FM-3; GPC-R	GPR66; NMU1R; (FM-3); FM-3; GPC-R
Homo sapiens	RefSeq	XM_929225.1	ILMN_31646	LOC646283	XM_929225.1	XM_929225.1		646283	89061229	XM_929225.1	LOC646283	XP_934318.1	ILMN_1702450	0006220068	S	1	ATGAACATACAGTGGTGGTTCAAGAAGTTTTGCAAGGAAGATGAGAGCCT	Y	-	5679422-5679471		PREDICTED: Homo sapiens similar to SET domain and mariner transposase fusion gene (LOC646283), mRNA.					
Homo sapiens	Unigene	Hs.12535	ILMN_71268	HS.12535	Hs.12535		Hs.12535		27831909	BX102680			ILMN_1850892	0006860270	S	411	CCATGGGCTCAACAGGGTCTGTAGCTGTTGGTTTTTCACTGGAGCTTGCG	19	-	36593429-36593478		BX102680 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGp998H0374, mRNA sequence					
Homo sapiens	RefSeq	NM_144574.2	ILMN_24880	WDR20	NM_144574.2	NM_144574.2		91833	31317279	NM_144574.2	WDR20	NP_653175.2	ILMN_2361324	0004120711	A	1096	GTCCAGGCTCTCCAAACGGAACTCTACAGACAGCCGCCCCGTAAGTGTCA	14	+	101745307-101745356	14q32.31c	Homo sapiens WD repeat domain 20 (WDR20), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]			FLJ33659; DMR; MGC33177; MGC33183	FLJ33659; DMR; MGC33177; MGC33183
Homo sapiens	RefSeq	XM_936220.1	ILMN_138187	FAM35A	XM_936220.1	XM_936220.1		54537	89033475	XM_936220.1	FAM35A	XP_941313.1	ILMN_1724309	0001470192	I	140	TCCGTGGACCTCTGAAGTTCTTCTGTGGAACTTCTGAGCCTCTGATTAAG				10q23.2b	PREDICTED: Homo sapiens family with sequence similarity 35, member A (FAM35A), mRNA.					
Homo sapiens	RefSeq	XM_926025.1	ILMN_38553	LOC642536	XM_926025.1	XM_926025.1		642536	88942930	XM_926025.1	LOC642536	XP_931118.1	ILMN_1665365	0002680392	S	61	GCTAGTACTTCTTCCTATAATTTACAGTCTATATTTAACATTGGAAGTAG	1	+	106236110-106236159	1p21.1a	PREDICTED: Homo sapiens similar to Matrin-3 (LOC642536), mRNA.					
Homo sapiens	RefSeq	NR_030631.1	ILMN_388184	MIR934	NR_030631.1	NR_030631.1		100126324	262206215	NR_030631.1	MIR934		ILMN_3308793	0002340017	S	23	CTGGAGACACTGGTAGTATAAAACCCAGAGTCTCCAGTAATGGACGGGAG				Xq26.3b	Homo sapiens microRNA 934 (MIR934), microRNA.					
Homo sapiens	RefSeq	NM_031496.1	ILMN_706	PCDHA2	NM_031496.1	NM_031496.1		56146	14165406	NM_031496.1	PCDHA2	NP_113684.1	ILMN_1656033	0000270537	I	2788	TAGTTTGGGTCCCCACATAGTGAAAGTACTCTGGTTTCTGTTTGATTCAG	5	+	140165122-140165171	5q31.3b	Homo sapiens protocadherin alpha 2 (PCDHA2), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10380929] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10380929] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10380929] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-ALPHA2	PCDH-ALPHA2
Homo sapiens	RefSeq	XM_001714467.1	ILMN_350201	LOC100131218	XM_001714467.1	XM_001714467.1		100131218	169217993	XM_001714467.1	LOC100131218	XP_001714519.1	ILMN_3247582	0004210487	S	21	GGCTGGACCTGGGCCCTGCCTTTTGAACTTCTGGAGGTTTATATTCCGGA					PREDICTED: Homo sapiens similar to NADPH-dependent FMN and FAD containing oxidoreductase (LOC100131218), partial mRNA.					
Homo sapiens	RefSeq	XM_291007.5	ILMN_40789	LOC339766	XM_939706.2	XM_939706.2		339766	113414313	XM_939706.2	LOC339766	XP_944799.2	ILMN_1764457	0001300195	A	5511	CGCTCACAGTCTTGGATAGCTGTAGTCAGCATGGGTTTCTGGCTTCACCC				2q37.1d-q37.1e	PREDICTED: Homo sapiens hypothetical protein LOC339766 (LOC339766), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XM_943472.1	ILMN_34523	LOC648814	XM_943472.1	XM_943472.1		648814	89028507	XM_943472.1	LOC648814	XP_948565.1	ILMN_1658044	0007550025	S	330	GCAGGCCCCCGCGGAGGATCAACGTGGTGGCTGAACACCGGGAAGGAACT					PREDICTED: Homo sapiens hypothetical protein LOC648814 (LOC648814), mRNA.					
Homo sapiens	RefSeq	NM_002859.1	ILMN_14932	PXN	NM_002859.1	NM_002859.1		5829	4506344	NM_002859.1	PXN	NP_002850.1	ILMN_1684440	0006450541	S	3241	ATGACCAGAAAGGGGCCACCGGGGTCTAATGGTGACAGTCCAAACCACTC	12	-	119132960-119133009	12q24.31a	Homo sapiens paxillin (PXN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 10840040] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15574420] [evidence EXP]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 10840040] [evidence NAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7534286] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell. Complex formation involves dimerization of a receptor protein tyrosine kinase followed by the association of several different intracellular signaling molecules with the cytoplasmic tails of the receptors [goid 7172] [pmid 9054445] [evidence TAS]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14688263] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with vinculin, a protein found in muscle, fibroblasts, and epithelial cells that binds actin and appears to mediate attachment of actin filaments to integral proteins of the plasma membrane [goid 17166] [pmid 9054445] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ16691	FLJ16691
Homo sapiens	RefSeq	NM_014188.2	ILMN_29116	SSU72	NM_014188.2	NM_014188.2		29101	46370096	NM_014188.2	SSU72	NP_054907.1	ILMN_1664956	0001500768	S	1163	GTTTGTGTGCACTTCCCGACATACCTGTGTCTTCGTGTGCCTGCCTTCCC	1	-	1480268-1480317	1p36.33a	Homo sapiens SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) (SSU72), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	PNAS-120; HSPC182; FLJ13048	PNAS-120; HSPC182; FLJ13048
Homo sapiens	RefSeq	XM_926234.1	ILMN_42477	LOC642832	XM_926234.1	XM_926234.1		642832	89029892	XM_926234.1	LOC642832	XP_931327.1	ILMN_1666418	0000150307	S	125	AAACAGAAAATTGGGTATCAGCATTTTCTACCTGGGAGAAAGAATTACAC	9	-	93959511-93959547:93960182-93960194		PREDICTED: Homo sapiens similar to transcription elongation regulator 1-like (LOC642832), mRNA.					
Homo sapiens	RefSeq	NM_002080.2	ILMN_16205	GOT2	NM_002080.2	NM_002080.2		2806	73486657	NM_002080.2	GOT2	NP_002071.2	ILMN_1801348	0006980048	S	2192	GTGCAAGTTTCTCCAGTTGGGATGTTGTCTCTGCCCGGTTGGACCTCCTC	16	-	58741240-58741289	16q21a	Homo sapiens glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) (GOT2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9537447] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 4052435] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9537447] [evidence IDA]	The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid [goid 6533] [pmid 2567216] [evidence IDA]; The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones [goid 9058] [evidence IEA]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [pmid 9537447] [evidence IEP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus [goid 45471] [pmid 9537447] [evidence IDA]	Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate [goid 4069] [pmid 2567216] [evidence IDA]; Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate [goid 4069] [pmid 4052435] [evidence EXP]; Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate [goid 4069] [pmid 2731362] [evidence IDA]; Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate [goid 4069] [pmid 2182221] [evidence IDA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	FLJ40994	FLJ40994
Homo sapiens	RefSeq	NM_032351.3	ILMN_164349	MRPL45	NM_032351.3	NM_032351.3		84311	34304321	NM_032351.3	MRPL45	NP_115727.3	ILMN_1748650	0003710719	A	1492	CTGGGCATGGACCAGCCTTCAGATGGCAGAAGTGGAAGATGAGCCTACTT	17	+	33732424-33732473	17q12c	Homo sapiens mitochondrial ribosomal protein L45 (MRPL45), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence NAS]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence NAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence NAS]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	MGC11321	MGC11321
Homo sapiens	RefSeq	NM_032351.3	ILMN_164349	MRPL45	NM_032351.3	NM_032351.3		84311	34304321	NM_032351.3	MRPL45	NP_115727.3	ILMN_1808301	0007570315	I	616	CAGACCATGACCGACTTCATACCTTGGTAACTGAACACTGTTTTCCAGAC	17	+	33728111-33728157:33730029-33730031	17q12c	Homo sapiens mitochondrial ribosomal protein L45 (MRPL45), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence NAS]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence NAS]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence NAS]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]	MGC11321	MGC11321
Homo sapiens	Unigene	Hs.525926	ILMN_100729	HS.525926	Hs.525926		Hs.525926		51667216	CR744215			ILMN_1868594	0007570112	S	401	gctgattacgtgcagctttcccttcaggcgggattcatacagcggccagc					CR744215 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGp971M1962 ; IMAGE:1540363 5, mRNA sequence					
Homo sapiens	RefSeq	NM_000979.2	ILMN_7923	RPL18	NM_000979.2	NM_000979.2		6141	15431298	NM_000979.2	RPL18	NP_000970.1	ILMN_2230624	0003780220	S	572	GACGGGCCAGCCGAGGCTACAAAAACTAACCCTGGATCCTACTCTCTTAT	19	-	53810419-53810440:53810441-53810468	19q13.33a	Homo sapiens ribosomal protein L18 (RPL18), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 8218404] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 8218404] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 8218404] [evidence TAS]		
Homo sapiens	RefSeq	NM_194289.1	ILMN_14893	LOC152195	NM_194289.1	NM_194289.1		152195	34916013	NM_194289.1	LOC152195	NP_919265.1	ILMN_1716468	0001190167	S	1374	TGTAGACTCTGGGACTATCAGAAGAGAACTGACCCATACCTGTCTAGCCC	3	+	132565733-132565782	3q22.1b	Homo sapiens hypothetical protein LOC152195 (LOC152195), mRNA.					
Homo sapiens	RefSeq	XM_929351.1	ILMN_39693	LOC653741	XM_929351.1	XM_929351.1		653741	89041363	XM_929351.1	LOC653741	XP_934444.1	ILMN_1764693	0004900762	S	41	GGAAACTGGTGTTCTATGCTTATCTTCAATCTGAAGAGGATGTAAGTCAG	17	-	31687649-31687673:31688784-31688808		PREDICTED: Homo sapiens similar to ribosomal protein S6 kinase, polypeptide 1 (LOC653741), mRNA.					
Homo sapiens	RefSeq	NM_016538.1	ILMN_1438	SIRT7	NM_016538.1	NM_016538.1		51547	7706711	NM_016538.1	SIRT7	NP_057622.1	ILMN_2077858	0003370592	S	836	GGTCCAGCCTGAAGGTTCTAAAGAAGTACCCACGCCTCTGGTGCATGACC	17	-	79872007-79872043:79872170-79872182	17q25.3g	Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 7 (S. cerevisiae) (SIRT7), mRNA.	Any protein complex that mediates changes in chromatin structure that result in transcriptional silencing [goid 5677] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Repression of transcription by altering the structure of chromatin, e.g. by conversion of large regions of DNA into an inaccessible state often called heterochromatin [goid 6342] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The removal of an acetyl group from a protein amino acid. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid [goid 6476] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of one or more acetyl groups from a histone, requiring NAD [goid 17136] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]	SIR2L7; MGC126840; MGC126842	SIR2L7; MGC126840; MGC126842
Homo sapiens	RefSeq	NM_002144.2	ILMN_30100	HOXB1	NM_002144.3	NM_002144.3		3211	84043951	NM_002144.3	HOXB1	NP_002135.2	ILMN_1718079	0000270767	S	865	TCGACATGCACCTCCCCGGAAGCCTCACCCAGCTCTGTCACCTCCTGAAC	17	-	46606906-46606908:46606909-46606955	17q21.32c	Homo sapiens homeobox B1 (HOXB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [pmid 10052460] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 10052460] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX2; HOX2I; MGC116843; Hox-2.9; MGC116844; MGC116845	HOX2; HOX2I; MGC116843; Hox-2.9; MGC116844; MGC116845
Homo sapiens	RefSeq	NM_019037.2	ILMN_25178	EXOSC4	NM_019037.2	NM_019037.2		54512	56699483	NM_019037.2	EXOSC4	NP_061910.1	ILMN_1745271	0007560253	S	485	GCAGGTGCTACAGGCAGATGGTGGGACCTATGCAGCTTGTGTGAATGCAG	8	+	145135049-145135052:145135145-145135190	8q24.3g	Homo sapiens exosome component 4 (EXOSC4), mRNA.	Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11110791] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11110791] [evidence NAS]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [pmid 11110791] [evidence NAS]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [pmid 11110791] [evidence NAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Rrp41p; p12A; FLJ20591; hRrp41p; Ski6p; RRP41A; SKI6; RRP41	p12A; hRrp41p; RRP41A; RRP41; Rrp41p; FLJ20591; Ski6p; SKI6
Homo sapiens	RefSeq	XR_039737.1	ILMN_344586	LOC100128010	XR_039737.1	XR_039737.1		100128010	169210989	XR_039737.1	LOC100128010		ILMN_3187545	0003450019	A	1299	CCAAGAGAAGTTTTCATCTCAGGGGTGGTCATTTCTGGAGGCAGGGGCCT	17	-	44306294-44306343	17q21.32c	PREDICTED: Homo sapiens misc_RNA (LOC100128010), miscRNA.					
Homo sapiens	RefSeq	NM_003275.1	ILMN_1052	TMOD1	NM_003275.2	NM_003275.2		7111	141801862	NM_003275.2	TMOD1	NP_003266.1	ILMN_1736911	0003140520	S	1406	AGCCCCAGGAGCCCAGTTTCAATGGCCTTGCTGTGTGGTGTTTCAAGTGC	9	+	99402093-99402142	9q22.33a-q22.33b	Homo sapiens tropomodulin 1 (TMOD1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism [goid 30016] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; Formation of myofibrils, the repeating units of striated muscle [goid 30239] [evidence IEA]	Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with tropomyosin, a protein associated with actin filaments both in cytoplasm and, in association with troponin, in the thin filament of striated muscle [goid 5523] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	ETMOD; D9S57E; TMOD	ETMOD; D9S57E; TMOD
Homo sapiens	RefSeq	NM_001025300.1	ILMN_22035	RAB12	NM_001025300.1	NM_001025300.1		201475	70778967	NM_001025300.1	RAB12	NP_001020471.1	ILMN_1670666	0004670681	S	4558	GGCACAGCTGCTCAGCAAGTGGTCAGGGCCAAGGGCTGCAAGTGAATTCT	18	+	8603992-8604041	18p11.22c	Homo sapiens RAB12, member RAS oncogene family (RAB12), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC104724; FLJ45927	MGC104724; FLJ45927
Homo sapiens	RefSeq	XR_038617.1	ILMN_351465	LOC100132147	XR_038617.1	XR_038617.1		100132147	169162876	XR_038617.1	LOC100132147		ILMN_3248406	0004810528	S	2189	CATTTCCACTTTACCTGGCAGGGGAGAGACCGTGGTCACGAAGGGGGTTC	1	-	16733262-16733311	1p36.13f	PREDICTED: Homo sapiens misc_RNA (LOC100132147), miscRNA.					
Homo sapiens	RefSeq	XM_928694.2	ILMN_39462	LOC645685	XM_928694.2	XM_928694.2		645685	113403777	XM_928694.2	LOC645685	XP_933787.2	ILMN_3295558	0000010047	M	493	AAGCTTCTGCAGCAGGCGAGGGGCAGGGCGGGCGAAGGCAATTCTGCTGT	1	-	16719927-16719976	1p36.13f	PREDICTED: Homo sapiens hypothetical LOC645685 (LOC645685), mRNA.					
Homo sapiens	RefSeq	NM_017826.1	ILMN_12331	SOHLH2	NM_017826.1	NM_017826.1		54937	8923418	NM_017826.1	SOHLH2	NP_060296.1	ILMN_1798615	0002900240	S	1504	CATACACACTTGGATCCCCGCCAGCCAGAGAGCTACAAGAACAAATGGCC	13	-	35640908-35640957	13q13.3a-q13.3b	Homo sapiens spermatogenesis and oogenesis specific basic helix-loop-helix 2 (SOHLH2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	FLJ20449; TEB1; bA121N13.2	FLJ20449; TEB1; bA121N13.2
Homo sapiens	RefSeq	NM_017826.1	ILMN_12331	SOHLH2	NM_017826.1	NM_017826.1		54937	8923418	NM_017826.1	SOHLH2	NP_060296.1	ILMN_2194355	0000010528	S	1798	CCATCCAAACTAAGATATGCAGAGAGATGCTGAAAGAGGGGTTTACCTCC	13	-	35640614-35640663	13q13.3a-q13.3b	Homo sapiens spermatogenesis and oogenesis specific basic helix-loop-helix 2 (SOHLH2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The complete process of formation and maturation of an ovum or female gamete from a primordial female germ cell [goid 48477] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	FLJ20449; TEB1; bA121N13.2	FLJ20449; TEB1; bA121N13.2
Homo sapiens	RefSeq	XM_928212.1	ILMN_39907	LOC645177	XM_928212.2	XM_928212.2		645177	113423288	XM_928212.2	LOC645177	XP_933305.2	ILMN_1661580	0001780689	S	181	CTGAGGAAAATGACTGCTGCTTGTGTTCCTACGCCCGGCTCTCATTGGTC	12	+	25048723-25048772	12p12.1b	PREDICTED: Homo sapiens hypothetical LOC645177 (LOC645177), mRNA.					
Homo sapiens	RefSeq	XR_016076.2	ILMN_171196	LOC729768	XR_016076.2	XR_016076.2		729768	169161616	XR_016076.2	LOC729768		ILMN_3228595	0003990689	A	543	TACTGGCTCCAAGTAGACCATGTCAGCTTCACCCCCCGGCTTTGTGTCTG				1p31.1e	PREDICTED: Homo sapiens misc_RNA (LOC729768), miscRNA.					
Homo sapiens	RefSeq	NM_018447.1	ILMN_11007	TMEM111	NM_018447.1	NM_018447.1		55831	8923856	NM_018447.1	TMEM111	NP_060917.1	ILMN_3240187	0004210220	S	828	GCTTTCAAGACAGAGTGGGAAGCTTTGGAGCTGACGGATCACCAGTGGGC	3	-	10005838-10005881:10011403-10011408	3p25.3c	Homo sapiens transmembrane protein 111 (TMEM111), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light [goid 45494] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	POB	POB
Homo sapiens	RefSeq	NM_001031725.1	ILMN_10085	DDX59	NM_001031725.3	NM_001031725.3		83479	145279207	NM_001031725.3	DDX59	NP_001026895.1	ILMN_1748077	0001300279	I	1904	CTGGGATATTGCAAAACGAGTAAAGCCCACAGGATCCATTCTTCCCCCTC	1	-	198880154-198880203	1q32.1b	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a DNA or RNA helix [goid 4386] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNHIT5; DKFZP564B1023; RP11-92G12.2	ZNHIT5; DKFZP564B1023; RP11-92G12.2
Homo sapiens	RefSeq	XM_001721042.1	ILMN_343881	LOC100128653	XM_001721042.1	XM_001721042.1		100128653	169172107	XM_001721042.1	LOC100128653	XP_001721094.1	ILMN_3263243	0000020008	M	121	CGCTCTACGAGGCCAGCATGGGGGCTCTGGATGGGTCACTTGTTCTTGCC				7p22.3b	PREDICTED: Homo sapiens hypothetical protein LOC100128653 (LOC100128653), mRNA.					
Homo sapiens	RefSeq	XM_001721042.1	ILMN_343881	LOC100128653	XM_001721042.1	XM_001721042.1		100128653	169172107	XM_001721042.1	LOC100128653	XP_001721094.1	ILMN_3186782	0000020592	A	181	ATGATGACACAGACTCCATGCCCCACCCCCTCAGCTGCCCAGCCAGTCTG				7p22.3b	PREDICTED: Homo sapiens hypothetical protein LOC100128653 (LOC100128653), mRNA.					
Homo sapiens	RefSeq	XR_042285.1	ILMN_341154	LOC100130217	XR_042285.1	XR_042285.1		100130217	169170999	XR_042285.1	LOC100130217		ILMN_3231935	0004180039	I	926	TGTTCCCGAGCTGCCTTCGGACCCGTCGGATCGTAAATCCCACGTAAGGT	7	+	149362644-149362693	7q36.1b	PREDICTED: Homo sapiens misc_RNA (LOC100130217), miscRNA.					
Homo sapiens	RefSeq	NM_004072.1	ILMN_15260	CMKLR1	NM_004072.1	NM_004072.1		1240	4758013	NM_004072.1	CMKLR1	NP_004063.1	ILMN_1673030	0001690626	S	1631	CCTCACTGTGGAACCCCTCAATGGACTCTCTCAACCCAGGGACACCCAAG	12	-	107209678-107209727	12q23.3d	Homo sapiens chemokine-like receptor 1 (CMKLR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9425281] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9144535] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 9425281] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 9425281] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9603476] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9144535] [evidence TAS]; Combining with anaphylatoxin C5a to initiate a change in cell activity [goid 4944] [evidence IEA]; Combining with chemokines, small chemoattractant molecules normally used to stimulate leukocytes, to initiate a change in cell activity [goid 4950] [pmid 9425281] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC126105; ChemR23; DEZ; MGC126106	MGC126105; ChemR23; DEZ; MGC126106
Homo sapiens	RefSeq	XM_945561.1	ILMN_138336	ANKRD13D	XM_945561.1	XM_945561.1		338692	89034914	XM_945561.1	ANKRD13D	XP_950654.1	ILMN_1660183	0000610070	I	330	TTGAATTTCATGAGTACCTGCTGGGGCCAGCGTGGCACAGTGGGAAGGGC				11q13.1f	PREDICTED: Homo sapiens ankyrin repeat domain 13 family, member D, transcript variant 4 (ANKRD13D), mRNA.					
Homo sapiens	RefSeq	NM_006422.2	ILMN_182454	AKAP3	NM_006422.2	NM_006422.2		10566	21493040	NM_006422.2	AKAP3	NP_006413.2	ILMN_1808905	0004860088	S	2703	TGCGCTATGAGAAGGAGCGCCAGCTGAATGAGGCGGTGGGGAATGTCACA	12	-	4724943-4724992	12p13.32a	Homo sapiens A kinase (PRKA) anchor protein 3 (AKAP3), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; A long, whiplike protrusion from the surface of a eukaryotic cell, whose undulations drive the cell through a liquid medium; similar in structure to a cilium. The flagellum is based on a 9+2 arrangement of microtubules [goid 9434] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 10319321] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [pmid 10319321] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]	Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10319321] [evidence TAS]	AKAP110; FSP95; SOB1; PRKA3	AKAP110; FSP95; SOB1; PRKA3
Homo sapiens	RefSeq	NM_130810.2	ILMN_25217	DYX1C1	NM_130810.2	NM_130810.2		161582	75677569	NM_130810.2	DYX1C1	NP_570722.2	ILMN_1731025	0004670220	I	1437	CCTGTTACAGACAATGCTAATGCAAGAATGAAGGCACATGTACGACGTGG	15	-	55724729-55724778	15q21.3c	Homo sapiens dyslexia susceptibility 1 candidate 1 (DYX1C1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	EKN1; FLJ37882; MGC70618; DYX1; RD; DYXC1	EKN1; FLJ37882; MGC70618; DYX1; RD; DYXC1
Homo sapiens	RefSeq	NM_004036.2	ILMN_26929	ADCY3	NM_004036.3	NM_004036.3		109	148536829	NM_004036.3	ADCY3	NP_004027.2	ILMN_1676893	0003800050	S	4289	CTTGCCTTTTGAGCTCTTGCTACAGTCGCCTTTGCTACTGCTTTAAGAGA	2	-	25042096-25042145	2p23.3c	Homo sapiens adenylate cyclase 3 (ADCY3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9920776] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9920776] [evidence TAS]	The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [pmid 9920776] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	KIAA0511; AC3	KIAA0511; AC3
Homo sapiens	RefSeq	NM_182589.2	ILMN_22144	HTR3E	NM_182589.2	NM_182589.2		285242	47519912	NM_182589.2	HTR3E	NP_872395.2	ILMN_1778277	0003360519	S	1664	GGCCAGGTCTCCCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGAT	3	+	183824535-183824584	3q27.1b	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3, family member E (HTR3E), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	MGC120036; MGC120035; MGC120037; 5-HT3c1	MGC120035; MGC120037; 5-HT3c1; MGC120036
Homo sapiens	RefSeq	NM_006918.3	ILMN_24287	SC5DL	NM_006918.4	NM_006918.4		6309	122939199	NM_006918.4	SC5DL	NP_008849.2	ILMN_1677607	0006220397	A	1971	GGCCCATTGCTGACGATTAGTTCTAAAATCTTATTCCTCCTCTTCTCCCC	11	+	120684354-120684403	11q23.3h	Homo sapiens sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like (SC5DL), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 8976377] [evidence TAS]; The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule [goid 16126] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 5,7,24(28)-ergostatrienol + O2 + NADPH = 5,7,22,24(28)-ergostatetraenol + 2 H2O + NADP+ [goid 248] [pmid 8976377] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol + O2 = cholesta-5,7-dien-3-beta-ol + H2O2 [goid 50046] [evidence IEA]	ERG3; SC5D; S5DES	ERG3; SC5D
Homo sapiens	RefSeq	XM_929496.1	ILMN_36535	LOC646561	XM_929496.2	XM_929496.2		646561	113415773	XM_929496.2	LOC646561	XP_934589.1	ILMN_1792979	0004880593	S	1984	GAGGACTTGGAGTGGGCCTTGAGCTTGGCCTTTAGATTAACAGGGGCCAG	4	-	145050938-145050987	4q31.22a	PREDICTED: Homo sapiens similar to WW45 protein (LOC646561), mRNA.					
Homo sapiens	RefSeq	NM_001031812.1	ILMN_17895	CSNK1G3	NM_001031812.2	NM_001031812.2		1456	113462006	NM_001031812.2	CSNK1G3	NP_001026982.1	ILMN_1652024	0004210064	A	3403	CCTCCCATGCAGTCTCTTCGTTGTCTTTAAGTGTGTGCCTCCAGGCATGC	5	+	122950110-122950159	5q23.2b	Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 9925945] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9925945] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_944529.1	ILMN_42262	MGC3032	XM_933539.2	XM_933539.2		65998	113422428	XM_933539.2	MGC3032	XP_938632.2	ILMN_1710413	0002760497	A	1861	ACGCCTGAGGAGCGCCAGACTATCCTGGAGGCCTACGAGGAGGCGGCGCT	11	-	63287559-63287608	11q13.1a	PREDICTED: Homo sapiens hypothetical protein MGC3032, transcript variant 3 (MGC3032), mRNA.					
Homo sapiens	RefSeq	XM_940271.1	ILMN_42262	MGC3032	XM_933539.2	XM_933539.2		65998	113422428	XM_933539.2	MGC3032	XP_938632.2	ILMN_1722752	0004760270	I	751	GAGTCCCTGCAGAACTGGTTCCGGGCCGAGTGTCTCATGGACTATGACCC	11	-	63289106-63289155	11q13.1a	PREDICTED: Homo sapiens hypothetical protein MGC3032, transcript variant 3 (MGC3032), mRNA.					
Homo sapiens	RefSeq	Hs.568944	ILMN_42262	MGC3032	XM_933539.2	XM_933539.2		65998	113422428	XM_933539.2	MGC3032	XP_938632.2	ILMN_1862180	0004890278	S	4950	GGTCACAGCAGCCTTAGTTTAGGAGAAGAGCTAATCACAGGTGACCACTC	11	-	63284354-63284403	11q13.1a	PREDICTED: Homo sapiens hypothetical protein MGC3032, transcript variant 3 (MGC3032), mRNA.					
Homo sapiens	RefSeq	XM_929168.1	ILMN_39568	LOC643283	XM_929168.1	XM_929168.1		643283	89041824	XM_929168.1	LOC643283	XP_934261.1	ILMN_1673607	0003520450	S	259	TGCCTGCAGGGTCTTGAGCCCTGTCTGTTCTGCCTCAGTCCTGGTCAGGA	17	+	72935380-72935429		PREDICTED: Homo sapiens hypothetical protein LOC643283 (LOC643283), mRNA.					
Homo sapiens	RefSeq	NM_032489.2	ILMN_22648	ACRBP	NM_032489.2	NM_032489.2		84519	17999523	NM_032489.2	ACRBP	NP_115878.2	ILMN_1784203	0007510253	S	1594	AGTGCGCTGAGCCCTGGCAAAAGTGAGGACGTTGTGCTTCGATGGAGCCA	12	-	6747484-6747533	12p13.31d	Homo sapiens acrosin binding protein (ACRBP), mRNA.	A structure in the head of a spermatozoon that contains acid hydrolases, and is concerned with the breakdown of the outer membrane of the ovum during fertilization. It lies just beneath the plasma membrane and is derived from the lysosome [goid 1669] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	OY-TES-1; SP32	OY-TES-1; SP32
Homo sapiens	RefSeq	NM_001018059.2	ILMN_12371	LOC440348	NM_001018059.2	NM_001018059.2		440348	119672908	NM_001018059.2	LOC440348	NP_001018069.2	ILMN_2147105	0001230278	S	663	CAAGGAGTGTCCTCTTGCTCCTCTTCCACCCTCAGTGGATGATAATCTGA	16	+	72982993-72983042	16q22.3c	Homo sapiens similar to nuclear pore complex interacting protein (LOC440348), mRNA.				A-761H5.4	A-761H5.4
Homo sapiens	Unigene	Hs.575825	ILMN_128006	HS.575825	Hs.575825		Hs.575825		3429932	AI090873			ILMN_1872542	0004830673	S	108	AGGATAATCTCATGGATGGGGGGCAGGTAGTGGGGAGTGCTGACTGGTCC	1	+	209616873-209616922		ov44h04.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1640215 3 similar to contains LTR8.b1 LTR8 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	XR_039723.1	ILMN_347117	LOC100132199	XR_039723.1	XR_039723.1		100132199	169208079	XR_039723.1	LOC100132199		ILMN_3289730	0000290743	M	90	AGAAGTGTGGCAAGCACCAACCCCACAAAACGGCACAATACCAGGACTCC	15	+	58469899-58469948	15q22.2a	PREDICTED: Homo sapiens misc_RNA (LOC100132199), miscRNA.					
Homo sapiens	RefSeq	NM_181672.1	ILMN_4981	OGT	NM_181672.1	NM_181672.1		8473	32307147	NM_181672.1	OGT	NP_858058.1	ILMN_2364828	0001430176	A	4224	GACCTGTTTCACCAGTGTTTTACCCTTGACTGCCCCTTCTATGCTGCTTC	X	+	70711235-70711284	Xq13.1d	Homo sapiens O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) (OGT), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9083067] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9083067] [evidence TAS]	The formation of O-glycans by addition of glycosyl groups either to the hydroxyl group of peptidyl-serine, peptidyl-threonine, peptidyl-hydroxylysine, or peptidyl-hydroxyproline, or to the phenol group of peptidyl-tyrosine [goid 6493] [pmid 9083067] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9083067] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 9083068] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12670868] [evidence IPI]; Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to an oligosaccharide [goid 8375] [pmid 9083068] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	MGC22921; HRNT1; O-GLCNAC; FLJ23071	MGC22921; HRNT1; O-GLCNAC; FLJ23071
Homo sapiens	RefSeq	NM_133484.1	ILMN_11063	TANK	NM_133484.1	NM_133484.1		10010	19743570	NM_133484.1	TANK	NP_597841.1	ILMN_2372773	0002370575	A	257	GACTGAGAACTATGAGCAGAGAATACGTGAACAACAGGAACAGCTGTCAC	2	+	161744518-161744518:161768244-161768292	2q24.2c	Homo sapiens TRAF family member-associated NFKB activator (TANK), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8710854] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12005438] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRAF2; I-TRAF	TRAF2; I-TRAF
Homo sapiens	RefSeq	NM_133484.1	ILMN_11063	TANK	NM_133484.1	NM_133484.1		10010	19743570	NM_133484.1	TANK	NP_597841.1	ILMN_1793849	0005570463	A	67	AGAGGAATAGTCTACAAAGGAAGACTTGTAACCTGGAGAAGAGACCTGTC	2	+	161701778-161701820:161744371-161744377	2q24.2c	Homo sapiens TRAF family member-associated NFKB activator (TANK), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8710854] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12005438] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TRAF2; I-TRAF	TRAF2; I-TRAF
Homo sapiens	RefSeq	NM_178569.2	ILMN_27319	C5ORF38	NM_178569.2	NM_178569.2		153571	31340723	NM_178569.2	C5orf38	NP_848664.1	ILMN_1695852	0006110309	S	425	CGCCGCCGGTGCAGTGGGCATTACAGGTGCAAGGGAACCAGTTGCAAACT	5	+	2752843-2752868:2753399-2753422	5p15.33b	Homo sapiens chromosome 5 open reading frame 38 (C5orf38), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC126683; CEI; MGC126657; IRX2NB	MGC126683; CEI; MGC126657; IRX2NB
Homo sapiens	RefSeq	XM_001714594.1	ILMN_351728	LOC100129165	XM_001714594.1	XM_001714594.1		100129165	169203853	XM_001714594.1	LOC100129165	XP_001714646.1	ILMN_3272441	0001170242	M	2566	GCTGCTGTGGTGCCAACAGAGACTTCCAAATGGATTATGTTAAATGGCCG	12	+	79597831-79597880	12q21.31a	PREDICTED: Homo sapiens similar to Phosphotidylinositol phosphatase PTPRQ precursor (Receptor-type tyrosine-protein phosphatase Q) (PTP-RQ) (LOC100129165), mRNA.					
Homo sapiens	RefSeq	XR_000654.1	ILMN_37069	LOC400590	XR_000654.1	XR_000654.1		400590	89042598	XR_000654.1	LOC400590		ILMN_1671190	0000510348	A	1436	ACTTAGAGACAGGATCACCCTCTGTCACTCAGGCTGGAGAACAGTGTCAC				17q11.2c	PREDICTED: Homo sapiens hypothetical LOC400590 (LOC400590), misc RNA.					
Homo sapiens	RefSeq	NM_001901.1	ILMN_3374	CTGF	NM_001901.1	NM_001901.1		1490	4503122	NM_001901.1	CTGF	NP_001892.1	ILMN_1699829	0005690687	S	2044	CAGTGTCCTTGGCAGGCTGATTTCTAGGTAGGAAATGTGGTAGCTCACGC	6	-	132311203-132311252	6q23.2b	Homo sapiens connective tissue growth factor (CTGF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10809757] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10809757] [evidence TAS]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 10809757] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 10809757] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with an insulin-like growth factor, any member of a group of polypeptides that are structurally homologous to insulin and share many of its biological activities, but are immunologically distinct from it [goid 5520] [pmid 9371786] [evidence TAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	CCN2; MGC102839; IGFBP8; NOV2	CCN2; MGC102839; IGFBP8; NOV2
Homo sapiens	Unigene	Hs.158036	ILMN_79450	HS.158036	Hs.158036		Hs.158036		27841166	BX118491			ILMN_1849430	0000160139	S	389	CCCTTTCTCTTGGGCTCTGGGCCTCCTTACCAACACATCCTGTTGGCCAG	5	+	167088623-167088672		BX118491 NCI_CGAP_Brn23 Homo sapiens cDNA clone IMAGp998K174954, mRNA sequence					
Homo sapiens	RefSeq	NM_183243.1	ILMN_1180	IMPDH1	NM_183243.1	NM_183243.1		3614	34328927	NM_183243.1	IMPDH1	NP_899066.1	ILMN_2388363	0004640092	A	1795	CGAGGTGGTGGAGGGGATGCACCCCAGTGTCCACTTTTGGGCACAGCCTC	7	-	127820230-127820279	7q32.1a	Homo sapiens IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1), transcript variant 2, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7903306] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 7903306] [evidence EXP]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 1969416] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	sWSS2608; RP10; DKFZp781N0678; LCA11; IMPD; IMPD1	sWSS2608; RP10; DKFZp781N0678; LCA11; IMPD; IMPD1
Homo sapiens	RefSeq	NM_015042.1	ILMN_28956	ZNF609	NM_015042.1	NM_015042.1		23060	71725359	NM_015042.1	ZNF609	NP_055857.1	ILMN_1799082	0002680129	S	8350	GGTGGACTCCTGTGGCTACCCCATCAGAACAAGGGCTAAGGGTTTATGGG	15	+	62765052-62765101	15q22.31a-q22.31b	Homo sapiens zinc finger protein 609 (ZNF609), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0295	KIAA0295
Homo sapiens	RefSeq	NM_207366.1	ILMN_12665	SEPT14	NM_207366.2	NM_207366.2		346288	153252197	NM_207366.2	SEPT14	NP_997249.2	ILMN_1798053	0007200010	S	2809	CACTTATGTATCCATTCCTAGGCCTAGAAAAATGTCTGACGCATAGCAGC	7	-	55863000-55863049	7p11.2b	Homo sapiens septin 14 (SEPT14), mRNA.	Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	FLJ44060	
Homo sapiens	RefSeq	XM_935702.1	ILMN_39241	LOC641942	XM_935702.1	XM_935702.1		641942	89027686	XM_935702.1	LOC641942	XP_940795.1	ILMN_2188405	0000520088	S	42	AGGGCCTGAGAAGGGAAAGGCAGGTGGAATGGACAGCGCCTGCAAGGTGA					PREDICTED: Homo sapiens hypothetical LOC641942 (LOC641942), mRNA.					
Homo sapiens	RefSeq	NM_001035223.1	ILMN_6881	RGL3	NM_001035223.1	NM_001035223.1		57139	78097097	NM_001035223.1	RGL3	NP_001030300.1	ILMN_2074801	0004210093	S	2019	TGGGCCTGTGACTATCAGCTCTTTCAAGTCCTTCCTGGGGACCGGGTGCT	19	-	11366192-11366196:11368920-11368964	19p13.2b	Homo sapiens ral guanine nucleotide dissociation stimulator-like 3 (RGL3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	MGC126805; FLJ00153; MGC138163; FLJ32585	MGC126805; FLJ00153; MGC138163; FLJ32585
Homo sapiens	RefSeq	NM_018664.1	ILMN_7180	BATF3	NM_018664.1	NM_018664.1		55509	8924245	NM_018664.1	BATF3	NP_061134.1	ILMN_1763207	0005900253	S	762	CTCAGCCCGACATCCAACAGGCGCCAAACTCACAGAGCCCTTGTGCAGAT	1	-	210926551-210926600	1q32.3c	Homo sapiens basic leucine zipper transcription factor, ATF-like 3 (BATF3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10878360] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10878360] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10878360] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10878360] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	JUNDM1; SNFT; BATF3	JUNDM1; BATF3; SNFT
Homo sapiens	RefSeq	NM_032564.2	ILMN_19989	DGAT2	NM_032564.2	NM_032564.2		84649	26024196	NM_032564.2	DGAT2	NP_115953.2	ILMN_1681520	0003450537	S	2274	CAAGCCTCACTTTTCTGTGCCTTCCTGAGGGGGTTGGGCCGGGGAGGAAA	11	+	75190079-75190128	11q13.5a	Homo sapiens diacylglycerol O-acyltransferase homolog 2 (mouse) (DGAT2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 11481335] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids [goid 6071] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]; The chemical reactions and pathways resulting in the formation of triacylglycerol, any triester of glycerol [goid 19432] [pmid 11481335] [evidence IDA]	Catalysis of the reaction: acyl-CoA + 2-acylglycerol = CoA + diacylglycerol [goid 3846] [evidence IEA]; Catalysis of the reaction: acyl-CoA + 1,2-diacylglycerol = CoA + triacylglycerol [goid 4144] [pmid 11481335] [evidence IDA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	HMFN1045; DKFZp686A15125	HMFN1045; DKFZp686A15125
Homo sapiens	RefSeq	XM_938054.1	ILMN_46752	LOC388564	XM_498725.3	XM_498725.3		388564	113428385	XM_498725.3	LOC388564	XP_498725.2	ILMN_1748827	0005860050	A	2151	CAGACAACCCCTTGGCTCCAGCTGTCAGGACCAGACTGAGATGTGCAGCT	19	-	60582500-60582547:60586902-60586903	19q13.42b	PREDICTED: Homo sapiens hypothetical gene supported by BC052596 (LOC388564), mRNA.					
Homo sapiens	RefSeq	XM_942771.1	ILMN_37909	LOC642166	XM_942771.1	XM_942771.1		642166	88980282	XM_942771.1	LOC642166	XP_947864.1	ILMN_1711969	0003130402	S	862	AGTATGATTTGGAGGGCCGCTATGGTGGTTTGGGAACGTGAGCACACTCC					PREDICTED: Homo sapiens hypothetical protein LOC642166 (LOC642166), mRNA.					
Homo sapiens	RefSeq	XM_001724168.1	ILMN_349184	LOC100133506	XM_001724168.1	XM_001724168.1		100133506	169218271	XM_001724168.1	LOC100133506	XP_001724220.1	ILMN_3246875	0002230762	S	226	TCCTCAGCAACTGTCTGGATCCTGACAGGTCTCTCCAGGCCTTTCCTTCC					PREDICTED: Homo sapiens similar to p53AIP1 (LOC100133506), mRNA.					
Homo sapiens	RefSeq	NM_172200.1	ILMN_170874	IL15RA	NM_172200.1	NM_172200.1		3601	26787981	NM_172200.1	IL15RA	NP_751950.1	ILMN_1759958	0006580356	I	291	TCTCCGATGACTTTGCCCACTCTCTTCGCAGTGGGGACACCGGACCGAGT	10	-	6059808-6059857	10p15.1b	Homo sapiens interleukin 15 receptor, alpha (IL15RA), transcript variant 2, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8530383] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8530383] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an interleukin to initiate a change in cell activity [goid 4907] [pmid 7641685] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16284400] [evidence IPI]	MGC104179	MGC104179
Homo sapiens	RefSeq	XM_001713613.1	ILMN_342551	LOC100130833	XM_001713613.1	XM_001713613.1		100130833	169162081	XM_001713613.1	LOC100130833	XP_001713665.1	ILMN_3241675	0001070201	S	880	GAGGTCAAGGAAGCCCTGAAACGGTGGCTGGGGACGTGTGTAAACCTAAA					PREDICTED: Homo sapiens hypothetical protein LOC100130833 (LOC100130833), mRNA.					
Homo sapiens	RefSeq	NM_018722.1	ILMN_11106	KCNQ1DN	NM_018722.2	NM_018722.2		55539	91064870	NM_018722.2	KCNQ1DN	NP_061192.1	ILMN_1757119	0001940195	S	759	GGTGCAGCCCATCAAAGGCTTCCCAAGAGGCAAGAGGCAAGGAGAAGTGT	11	+	2848597-2848646	11p15.4d	Homo sapiens KCNQ1 downstream neighbor (KCNQ1DN), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	BWRT; HSA404617	BWRT; HSA404617
Homo sapiens	RefSeq	XM_001725226.1	ILMN_339087	LOC100132483	XM_001725226.1	XM_001725226.1		100132483	169166224	XM_001725226.1	LOC100132483	XP_001725278.1	ILMN_3238921	0001980731	S	1797	GCCGCCGCGTCTCCGCCATTTTTTAAAGGGTCCGCAGCCTGACTCTGCTG	4	+	132865561-132865602:132865603-132865610	4q28.3b	PREDICTED: Homo sapiens hypothetical protein LOC100132483 (LOC100132483), mRNA.					
Homo sapiens	RefSeq	XM_931493.1	ILMN_31628	LOC643339	XM_931493.2	XM_931493.2		643339	113423439	XM_931493.2	LOC643339	XP_936586.1	ILMN_1727852	0003130142	S	140	GGGGATGTAACTACATACACCGTCACCAAAGTTGCAGCCTGGCCAAGAAA	12	-	92295448-92295497	12q22a-q22b	PREDICTED: Homo sapiens hypothetical LOC643339 (LOC643339), mRNA.					
Homo sapiens	RefSeq	XR_037140.1	ILMN_342095	LOC388907	XR_037140.1	XR_037140.1		388907	169216071	XR_037140.1	LOC388907		ILMN_3207694	0007380242	A	410	GACGGCCAAGTGGAGGTGACTGGCGATAAATACAATGTGGAAAGTACTGA				22q13.2c	PREDICTED: Homo sapiens misc_RNA (LOC388907), miscRNA.					
Homo sapiens	RefSeq	XR_038002.1	ILMN_343303	LOC100130852	XR_038002.1	XR_038002.1		100130852	169218288	XR_038002.1	LOC100130852		ILMN_3186158	0006770521	A	2148	TGAGGCCGAGGCCGAGGCCGGGCCTGCAAAGGTCCACTGGAGGGCAAGTT					PREDICTED: Homo sapiens misc_RNA (LOC100130852), partial miscRNA.					
Homo sapiens	RefSeq	XR_038002.1	ILMN_343303	LOC100130852	XR_038002.1	XR_038002.1		100130852	169218288	XR_038002.1	LOC100130852		ILMN_3232447	0004230408	I	2378	GGAGAGGCTGACTTGCTGCTCTTCCAGGCCTAATTCCAGGCCGACTTGAG					PREDICTED: Homo sapiens misc_RNA (LOC100130852), partial miscRNA.					
Homo sapiens	RefSeq	XR_042386.1	ILMN_341863	LOC400036	XR_042386.1	XR_042386.1		400036	169204769	XR_042386.1	LOC400036		ILMN_3283965	0005860228	M	1778	CATCAAAGTCATGTTCATGGCCACCAAGCCCCCAGCAGTGGAGTGTCTGG				12q13.13d	PREDICTED: Homo sapiens misc_RNA (LOC400036), miscRNA.					
Homo sapiens	RefSeq	XR_042386.1	ILMN_341863	LOC400036	XR_042386.1	XR_042386.1		400036	169204769	XR_042386.1	LOC400036		ILMN_3207454	0000150368	A	2286	GAGGACTCTGCAGTTTTCTACGAGCTGAAGCAAGCCATCCTGGAAAGCCC				12q13.13d	PREDICTED: Homo sapiens misc_RNA (LOC400036), miscRNA.					
Homo sapiens	RefSeq	NM_001001653.1	ILMN_28290	MED8	NM_001001654.1	NM_001001654.1		112950	48762705	NM_001001654.1	MED8	NP_001001654.1	ILMN_1736847	0003060619	A	758	GTGGGGTACAAATGGCTCAGGCAGGTCAACCAGGGAAAATGCCAAGTGGA	1	-	43623347-43623364:43624236-43624267	1p34.2a	Homo sapiens mediator of RNA polymerase II transcription, subunit 8 homolog (S. cerevisiae) (MED8), transcript variant 5, mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 14638676] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		MGC19641; MGC17544; ARC32	MGC19641; MGC17544; ARC32
Homo sapiens	RefSeq	XM_927426.1	ILMN_36837	LOC644243	XM_927426.1	XM_927426.1		644243	88943836	XM_927426.1	LOC644243	XP_932519.1	ILMN_1678906	0006110162	S	150	GCCAAGAGCAGCGTAGCAACATGGCGCAACCCCATCTCTGTAGTCCTACC	1	-	222246649-222246698		PREDICTED: Homo sapiens similar to general transcription factor II I (LOC644243), mRNA.					
Homo sapiens	RefSeq	XM_936609.1	ILMN_35581	LOC647371	XM_936609.1	XM_936609.1		647371	88988741	XM_936609.1	LOC647371	XP_941702.1	ILMN_1758343	0007380722	S	1530	TTTAAAAACAGATTAGAAACAAATAGCACTCATTCTGACATCATCTACTG					PREDICTED: Homo sapiens hypothetical protein LOC647371 (LOC647371), mRNA.					
Homo sapiens	RefSeq	NM_017619.3	ILMN_25064	RNPC3	NM_017619.3	NM_017619.3		55599	56550119	NM_017619.3	RNPC3	NP_060089.1	ILMN_1783026	0003140577	S	987	CACCTTTGTGTCCTTCACACAGCAGTTTACATCCAGTGCTGTTACCTTCA	1	+	104077969-104078018	1p21.1c	Homo sapiens RNA-binding region (RNP1, RRM) containing 3 (RNPC3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ25070; KIAA183; RBM40; FLJ20008; RNP	FLJ25070; KIAA183; RBM40; FLJ20008; RNP
Homo sapiens	RefSeq	NM_017619.3	ILMN_25064	RNPC3	NM_017619.3	NM_017619.3		55599	56550119	NM_017619.3	RNPC3	NP_060089.1	ILMN_2150284	0002970315	S	1719	CTTTGAGAGGAAGAAATTGACCACCTGGACTATGGAACTGTGCGTAACAG	1	+	104087710-104087724:104088870-104088904	1p21.1c	Homo sapiens RNA-binding region (RNP1, RRM) containing 3 (RNPC3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ25070; KIAA183; RBM40; FLJ20008; RNP	FLJ25070; KIAA183; RBM40; FLJ20008; RNP
Homo sapiens	RefSeq	NM_006298.2	ILMN_9380	ZNF192	NM_006298.2	NM_006298.2		7745	56699472	NM_006298.2	ZNF192	NP_006289.2	ILMN_1811755	0001710025	S	4691	GGTGGTTCTTTCATAACTCTAATGCCATCCAACATAGCCCTGGGAGAGGC	6	+	28124565-28124614	6p22.1b	Homo sapiens zinc finger protein 192 (ZNF192), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10567577] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LD5-1; ZKSCAN8	LD5-1; ZKSCAN8
Homo sapiens	RefSeq	NM_000459.2	ILMN_38866	TEK	NM_000459.2	NM_000459.2		7010	88758595	NM_000459.2	TEK	NP_000450.2	ILMN_2066151	0007570176	S	4249	GTGACCACTCTGTCTTGTGTTTCCACAGCCTGCAAGTCAGTCCAGGATGC	9	+	27219801-27219850	9p21.2a	Homo sapiens TEK tyrosine kinase, endothelial (venous malformations, multiple cutaneous and mucosal) (TEK), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14749497] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14665640] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8382358] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8382358] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 8980225] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8980225] [evidence TAS]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 8382358] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 10766762] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TIE2; TIE-2; CD202B; VMCM1; VMCM	TIE2; TIE-2; CD202B; VMCM1; VMCM
Homo sapiens	RefSeq	NM_003590.2	ILMN_174597	CUL3	NM_003590.2	NM_003590.2		8452	45827792	NM_003590.2	CUL3	NP_003581.1	ILMN_1653670	0006200066	S	6579	GCTCAGTTTTAGGGTCTAAGTTGACCTCGAGTGAGCCATGCAAAAATAGC	2	-	225043272-225043321	2q36.2a	Homo sapiens cullin 3 (CUL3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity [goid 31461] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [pmid 8681378] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8681378] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9733711] [evidence TAS]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [pmid 8681378] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12609982] [evidence IPI]; Interacting selectively with a ubiquitin protein ligase enzyme, any of the E3 proteins [goid 31625] [evidence IEA]		
Homo sapiens	RefSeq	XM_926596.1	ILMN_34559	LOC401351	XM_926596.1	XM_926596.1		401351	89024937	XM_926596.1	LOC401351	XP_931689.1	ILMN_1768286	0001230692	A	673	ACTGTTACCCTTATCCCTGGTCACATCCAGGGAGACGCGGTCCAGCGGCC	7	+	62447010-62447059		PREDICTED: Homo sapiens hypothetical gene supported by BC040831, transcript variant 2 (LOC401351), mRNA.					
Homo sapiens	RefSeq	NM_145188.1	ILMN_31240	ABCC12	NM_033226.2	NM_033226.2		94160	89111134	NM_033226.2	ABCC12	NP_150229.2	ILMN_1762093	0006290348	A	4687	CCCCAAGGGTTCCTCATGTGTTTTCACCAAAACCACCCCAGTGCCTGAGA	16	-	48117315-48117364	16q12.1a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 12 (ABCC12), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	MRP9; MGC27071	MRP9; MGC27071
Homo sapiens	RefSeq	XM_926867.1	ILMN_34271	LOC643566	XM_926867.1	XM_926867.1		643566	89047238	XM_926867.1	LOC643566	XP_931960.1	ILMN_1790589	0001110131	S	111	TGCAAAACTAGACCAGTGTGCACTCACAGCAGAACAAGAAGTCATGTCGG	18	-	63858541-63858590		PREDICTED: Homo sapiens hypothetical protein LOC643566 (LOC643566), mRNA.					
Homo sapiens	RefSeq	XM_292723.4	ILMN_38307	LOC342933	XM_938208.2	XM_938208.2		342933	113428745	XM_938208.2	LOC342933	XP_943301.2	ILMN_1717059	0006860494	A	1387	CACACCGGGAAACCACCTCCCAGTGATTCCAGAGTCAGGTCCACATCCTC				19q13.42c	PREDICTED: Homo sapiens similar to zinc finger and SCAN domain containing 5 (LOC342933), mRNA.					
Homo sapiens	RefSeq	XR_018328.2	ILMN_167079	LOC645762	XR_018328.2	XR_018328.2		645762	169166882	XR_018328.2	LOC645762		ILMN_3243334	0004480050	S	230	CAGAGTGGTTGGATGGCAAGCATGTGGTCGTTAGCAAGGTGAAAGATTGC				4q28.1b	PREDICTED: Homo sapiens similar to TRIM5/cyclophilin A V1 fusion protein (LOC645762), mRNA.					
Homo sapiens	RefSeq	NM_001034954.1	ILMN_181884	SORBS1	NM_001034954.1	NM_001034954.1		10580	78000162	NM_001034954.1	SORBS1	NP_001030126.1	ILMN_2266224	0006040289	I	3086	CTATCTATAACACTGACCACCTCGCCTTGTCACCAAGGGCCAGTCCCTCC	10	-	97135781-97135813:97141442-97141458	10q23.33d	Homo sapiens sorbin and SH3 domain containing 1 (SORBS1), transcript variant 3, mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence ISS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11371513] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Cell-cell adherens junction which forms a continuous belt near the apex of epithelial cells [goid 5915] [pmid 10085297] [evidence TAS]; An adherens junction which connects a cell to the extracellular matrix [goid 5924] [evidence ISS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [evidence ISS]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence ISS]; Assembly of a stress fiber, the bundle of microfilaments and other proteins found in fibroblasts [goid 43149] [evidence ISS]; Establishment and maturation of focal adhesions, complexes of intracellular signaling and structural proteins which provide a structural link between the internal actin cytoskeleton and the ECM, and also function as a locus of signal transduction activity [goid 48041] [evidence ISS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 10085297] [evidence TAS]; Interacting selectively with the insulin receptor [goid 5158] [pmid 11374898] [evidence IDA]	SH3P12; DKFZp586P1422; SORB1; R85FL; DKFZp451C066; KIAA1296; FLJ12406; SH3D5; FLAF2; CAP	SH3P12; DKFZp586P1422; SORB1; R85FL; DKFZp451C066; KIAA1296; FLJ12406; SH3D5; FLAF2; CAP
Homo sapiens	RefSeq	NM_003312.4	ILMN_24453	TST	NM_003312.4	NM_003312.4		7263	34335291	NM_003312.4	TST	NP_003303.2	ILMN_1691572	0002230288	S	997	GGCCGGTTTAGTGACCCCATGACTTACAGCCGGTTCTTACCTCTTAGGTG	22	-	37406987-37407036	22q12.3d	Homo sapiens thiosulfate sulfurtransferase (rhodanese) (TST), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 1953758] [evidence NAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The directed movement of sulfate into, out of, within or between cells [goid 8272] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyanate, NCO-, the anion of cyanic acid [goid 9440] [pmid 9070219] [evidence TAS]	Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: thiosulfate + cyanide = SO3(2-) (sulfite) + thiocyanate [goid 4792] [pmid 9070219] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC19578; RDS	MGC19578; RDS
Homo sapiens	Unigene	Hs.527954	ILMN_100971	HS.527954	Hs.527954		Hs.527954		6704809	AW298173			ILMN_1889767	0003290131	S	209	CTAGCCAGAGGGAGGGGGATTTCGTCTTGCCAGGGTTGCAGCATTAGCAG	14	-	36195879-36195928		UI-H-BW0-ajt-a-09-0-UI.s1 NCI_CGAP_Sub6 Homo sapiens cDNA clone IMAGE:2732825 3, mRNA sequence					
Homo sapiens	RefSeq	NM_078488.1	ILMN_24337	VNN2	NM_078488.1	NM_078488.1		8875	17865815	NM_078488.1	VNN2	NP_511043.1	ILMN_1692546	0004280747	I	27	GGAAAGCAGCTGAGATCCAGAGGAGTGGAAGGCTCCCCCTTGACTAAAGC	6	-	133126215-133126264	6q23.2b	Homo sapiens vanin 2 (VNN2), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]	The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9790769] [evidence TAS]; The chemical reactions and pathways involving pantothenate, the anion of pantothenic acid, the amide of beta-alanine and pantoic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods [goid 15939] [pmid 11491533] [evidence IDA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]; The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium [goid 6807] [evidence IEA]	Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the reaction: (R)-pantetheine + H2O = (R)-pantothenate + 2-aminoethanethiol [goid 17159] [pmid 11491533] [evidence IDA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]; Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide [goid 16811] [evidence IEA]	FOAP-4; GPI-80	FOAP-4; GPI-80
Homo sapiens	RefSeq	XM_001726848.1	ILMN_346940	LOC100134708	XM_001726848.1	XM_001726848.1		100134708	169170703	XM_001726848.1	LOC100134708	XP_001726900.1	ILMN_3245130	0007510739	S	1535	CCCGTGCTGGGATTATAGGCATGAGCCACCACGTCCGGCCAAATTTTACT	7	+	153964973-153965022		PREDICTED: Homo sapiens similar to hCG1999107 (LOC100134708), mRNA.					
Homo sapiens	RefSeq	XM_927812.1	ILMN_30937	LOC644717	XM_927812.2	XM_927812.2		644717	113430130	XM_927812.2	LOC644717	XP_932905.2	ILMN_1673644	0002190110	S	904	GGCCAACCAGCACCCGATAATGTCATCGCAACTGTTCCACCAGCACTTAC	X	-	134600815-134600864	Xq26.3b	PREDICTED: Homo sapiens similar to sarcoma antigen 1 (LOC644717), mRNA.					
Homo sapiens	RefSeq	NM_033300.2	ILMN_18319	LRP8	NM_017522.3	NM_017522.3		7804	61744466	NM_017522.3	LRP8	NP_059992.3	ILMN_1677765	0004780411	A	3353	GAGACGTTTCCAGATCAGCCCAAGTTTACTATAGAGACTGGCCCAGGCAC	1	-	53711532-53711581	1p32.3c	Homo sapiens low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (LRP8), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10380922] [evidence NAS]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 11369809] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11152697] [evidence IC ]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 11152697] [evidence NAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 11152697] [evidence NAS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 8626535] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10380922] [evidence TAS]; Any series of molecular signals generated as a consequence of a cytokine or chemokine binding to a cell surface receptor [goid 19221] [pmid 11152697] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 8626535] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids [goid 8034] [pmid 11152697] [evidence IC ]; Combining with apolipoprotein E to initiate a change in cell activity [goid 30227] [pmid 11152697] [evidence TAS]; Combining with apolipoprotein E to initiate a change in cell activity [goid 30227] [pmid 8626535] [evidence IDA]; Combining with a very-low-density lipoprotein to initiate a change in cell activity [goid 30229] [pmid 8626535] [evidence IDA]	HSZ75190; APOER2; MCI1	HSZ75190; APOER2; MCI1
Homo sapiens	RefSeq	XM_928017.1	ILMN_34224	LOC644929	XM_928017.1	XM_928017.1		644929	88942349	XM_928017.1	LOC644929	XP_933110.1	ILMN_1743246	0000730706	S	124	GCGGCGGTGAAGGGGATGAGGACCAGGACCCCGTGCCCGGCGGGACTGGC	1	-	9165104-9165153		PREDICTED: Homo sapiens hypothetical protein LOC644929 (LOC644929), mRNA.					
Homo sapiens	Unigene	Hs.580053	ILMN_132234	HS.580053	Hs.580053		Hs.580053		83072796	DA724733			ILMN_1849206	0002900706	S	313	GCTCCCCACACACCCTGACCATGCAGGAAATGATTCTGATTGGCTCCTTC	2	-	192110290-192110339		DA724733 NT2RI3 Homo sapiens cDNA clone NT2RI3006220 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001716430.1	ILMN_352718	LOC100133910	XM_001716430.1	XM_001716430.1		100133910	169169008	XM_001716430.1	LOC100133910	XP_001716482.1	ILMN_3249321	0001410639	S	521	CGCCCGCGCTCCCGCAGCCCGAGACAACAAAAATGCAGATATCACTGGAT					PREDICTED: Homo sapiens hypothetical LOC100133910 (LOC100133910), mRNA.					
Homo sapiens	RefSeq	NM_152464.1	ILMN_3696	TMEM199	NM_152464.1	NM_152464.1		147007	22748978	NM_152464.1	TMEM199	NP_689677.1	ILMN_1748481	0002190056	S	1152	GAGAAAGATGGGTTGCTAGAGGATGGTAGAACTGGAAGCAAGGCAGCTAC	17	+	23712919-23712968	17q11.2a	Homo sapiens transmembrane protein 199 (TMEM199), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC45714; C17orf32	MGC45714; C17orf32
Homo sapiens	RefSeq	NM_001024649.1	ILMN_22642	CANX	NM_001746.3	NM_001746.3		821	66933003	NM_001746.3	CANX	NP_001737.1	ILMN_1762825	0001070402	A	4422	GCCCTTGCCTCTTCCTGCCCATGTGATTGCGGTGCAGTAGTTTCTGTTGT	5	+	179090717-179090766	5q35.3e	Homo sapiens calnexin (CANX), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15467828] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15467828] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 14966132] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 15467828] [evidence IDA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The regulated release of proteins from a cell or group of cells [goid 9306] [pmid 8055875] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8136357] [evidence TAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence NAS]	P90; IP90; FLJ26570; CNX	P90; IP90; FLJ26570; CNX
Homo sapiens	RefSeq	NM_022164.1	ILMN_28140	TINAGL1	NM_022164.1	NM_022164.1		64129	11545917	NM_022164.1	TINAGL1	NP_071447.1	ILMN_1807169	0001450634	S	1718	CCTCTGGCGCCCCCACTCAAGACTACCAAAGCCAGGACACCTCAAGTCTC	1	+	31825429-31825478	1p35.2a	Homo sapiens tubulointerstitial nephritis antigen-like 1 (TINAGL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11170462] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The directed movement of substances into, out of or mediated by an endosome, a membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 16197] [pmid 10799322] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the extracellular matrix [goid 5201] [pmid 11170462] [evidence NAS]	LIECG3; LCN7; TINAGRP; ARG1	LIECG3; LCN7; TINAGRP; ARG1
Homo sapiens	RefSeq	XR_041115.1	ILMN_343143	LOC400464	XR_041115.1	XR_041115.1		400464	169208386	XR_041115.1	LOC400464		ILMN_3307611	0002760435	I	668	AGCGTTGTTTGAGCCCAGGCGCGGAAGGGAAAAGGCCTCTGAGATGCTCG	15	+	98164926-98164975	15q26.3b	PREDICTED: Homo sapiens misc_RNA (LOC400464), miscRNA.					
Homo sapiens	RefSeq	XM_932428.1	ILMN_31609	LOC644828	XM_932428.1	XM_932428.1		644828	88998594	XM_932428.1	LOC644828	XP_937521.1	ILMN_1664552	0005290730	S	1	ATGAGCCCTGCCCAGATGGAAGATCCAGTGTCGACAGCACAGAGCCTGCC	6	-	169017987-169018036	6q27e	PREDICTED: Homo sapiens hypothetical LOC644828 (LOC644828), mRNA.					
Homo sapiens	RefSeq	XM_927212.1	ILMN_163891	LOC728127	XR_015281.1	XR_015281.1		728127	113421454	XR_015281.1	LOC728127		ILMN_1669981	0007320209	S	120	AGAAAAAGAAGTGGCATCTGCAGGATCTCCAGCTAGGAGACTAAGAAAAT	10	-	46661805-46661854	10q11.22a	PREDICTED: Homo sapiens similar to centaurin, gamma-like family, member 1 (LOC728127), mRNA.					
Homo sapiens	RefSeq	XM_930729.1	ILMN_163891	LOC728127	XR_015281.1	XR_015281.1		728127	113421454	XR_015281.1	LOC728127		ILMN_1698369	0006180692	I	1239	CCATCCCTTATGTGTCAGAGATGGCTTTGGATTCCCTGTTCTGTGTGCTC	10	-	46649124-46649163:46651004-46651013	10q11.22a	PREDICTED: Homo sapiens similar to centaurin, gamma-like family, member 1 (LOC728127), mRNA.					
Homo sapiens	Unigene	Hs.562164	ILMN_115333	HS.562164	Hs.562164		Hs.562164		11592631	BF509408			ILMN_1906842	0006960465	S	185	TCTTCTCCGCAAATGCACGATTTCACTCGGCCCTCACACACCCCACGAGG	1	+	116762605-116762654		UI-H-BI4-aoy-d-06-0-UI.s1 NCI_CGAP_Sub8 Homo sapiens cDNA clone IMAGE:3086626 3, mRNA sequence					
Homo sapiens	RefSeq	NM_002342.1	ILMN_30110	LTBR	NM_002342.1	NM_002342.1		4055	4505038	NM_002342.1	LTBR	NP_002333.1	ILMN_1667476	0004640064	S	1824	AAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCCCAAGCT	12	+	6370712-6370761	12p13.31d	Homo sapiens lymphotoxin beta receptor (TNFR superfamily, member 3) (LTBR), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8171323] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12393901] [evidence IPI]	TNF-R-III; TNFRSF3; TNFR-RP; LT-BETA-R; TNFCR; TNFR2-RP; CD18; D12S370	TNF-R-III; TNFRSF3; TNFR-RP; LT-BETA-R; TNFCR; TNFR2-RP; CD18; D12S370
Homo sapiens	RefSeq	NM_001010874.2	ILMN_180067	SRD5A2L2	NM_001010874.3	NM_001010874.3		253017	142378216	NM_001010874.3	SRD5A2L2	NP_001010874.2	ILMN_1781280	0000160433	S	2475	ACAGAGGATACTACAGGCTGGGAAAGCTGCAGCAAAGGGAGACTAGAGAG	4	-	64827061-64827110	4q13.1e	Homo sapiens steroid 5 alpha-reductase 2-like 2 (SRD5A2L2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16627] [evidence IEA]	MGC62104	MGC62104
Homo sapiens	RefSeq	NM_138418.2	ILMN_9509	FAM195A	NM_138418.2	NM_138418.2		84331	33300669	NM_138418.2	FAM195A	NP_612427.2	ILMN_1730523	0005690132	A	125	GGTGTGGGAGCGGCGCGTCATGTACACCATCACCAAGGGGCCCAGCAAGC	16	+	631974-631992:631993-632023	16p13.3f	Homo sapiens family with sequence similarity 195, member A (FAM195A), mRNA.				c349E10.1; MGC104301; MGC15416	c349E10.1; MGC104301; MGC15416
Homo sapiens	RefSeq	NM_002205.2	ILMN_165321	ITGA5	NM_002205.2	NM_002205.2		3678	56237028	NM_002205.2	ITGA5	NP_002196.2	ILMN_1792679	0006330338	S	4147	GCCCAACCCTTCCCTCACCTTGGCACCAGACACCCAGGACTTATTTAAAC	12	-	54789098-54789147	12q13.13f	Homo sapiens integrin, alpha 5 (fibronectin receptor, alpha polypeptide) (ITGA5), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 11919189] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 2454952] [evidence TAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate [goid 7044] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2454952] [evidence TAS]; The attachment of an adhesion molecule in one cell to a nonidentical adhesion molecule in an adjacent cell [goid 7157] [evidence IEA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; The attachment of one cell to another cell via an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits [goid 33631] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD49e; VLA5A; FNRA	CD49e; VLA5A; FNRA
Homo sapiens	RefSeq	XM_378462.3	ILMN_39862	FLJ22447	XM_378462.4	XM_378462.4		400221	113424630	XM_378462.4	FLJ22447	XP_378462.2	ILMN_1705207	0003450561	I	1156	TATGACTAGTACAAGTTTATAACTACAAAAAACAGAGATTTTGTCATCTT	14	+	61191028-61191077	14q23.1c	PREDICTED: Homo sapiens hypothetical gene supported by AK026100, transcript variant 1 (FLJ22447), mRNA.					
Homo sapiens	RefSeq	NM_007024.4	ILMN_22159	TMEM115	NM_007024.4	NM_007024.4		11070	40795669	NM_007024.4	TMEM115	NP_008955.1	ILMN_1712035	0005310379	S	2033	CACTTGAGTGGGCAGCCAAGCCCAGGCTCGCAGTATCAATAAAGCAGTTC	3	-	50392192-50392241	3p21.31b	Homo sapiens transmembrane protein 115 (TMEM115), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			PL6	PL6
Homo sapiens	RefSeq	XR_038899.1	ILMN_334155	LOC100132302	XR_038899.1	XR_038899.1		100132302	169216591	XR_038899.1	LOC100132302		ILMN_3235031	0006400575	S	1086	TAGGACTGGAATTTCAAGCATAAATGAATACTCTACAATTGTTTAATTTT	X	-	91124279-91124328	Xq21.31e	PREDICTED: Homo sapiens misc_RNA (LOC100132302), miscRNA.					
Homo sapiens	RefSeq	XR_038081.1	ILMN_340129	LOC100134412	XR_038081.1	XR_038081.1		100134412	169217793	XR_038081.1	LOC100134412		ILMN_3239694	0006960368	S	1003	CATCGCTTGAATCAAATGTTGGCATGTCCGTTGACACTCTGAGTTTGGCA					PREDICTED: Homo sapiens misc_RNA (LOC100134412), miscRNA.					
Homo sapiens	RefSeq	XM_001717831.1	ILMN_349656	LOC100129924	XM_001717831.1	XM_001717831.1		100129924	169160680	XM_001717831.1	LOC100129924	XP_001717883.1	ILMN_3269904	0001260414	M	580	CGGATGCTCCTGGTCAGCTTCCTGTTAGACATGGCAGTCAGGGCAATGAC				1p34.2a	PREDICTED: Homo sapiens similar to hCG2036949 (LOC100129924), mRNA.					
Homo sapiens	RefSeq	XM_932213.1	ILMN_40954	LOC643847	XM_932213.1	XM_932213.1		643847	89034009	XM_932213.1	LOC643847	XP_937306.1	ILMN_1666985	0002900717	I	1748	CTAGCCCATTGATTCTGAGCAAGCTACAGCTCATCTCACCCTCAGTTTTC	11	+	60754594-60754643	11q12.2b	PREDICTED: Homo sapiens similar to Pepsin A precursor, transcript variant 3 (LOC643847), mRNA.					
Homo sapiens	Unigene	Hs.539195	ILMN_104365	HS.539195	Hs.539195		Hs.539195		3427648	AI088589			ILMN_1867345	0001710246	S	204	GAACCAACCCTCACAGTCCAGCCTCCAACATTCTGCAAAGCTGTGGCCTG	12	+	107494714-107494763		qb12g03.x1 Soares_pregnant_uterus_NbHPU Homo sapiens cDNA clone IMAGE:1696084 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004135.2	ILMN_14606	IDH3G	NM_174869.1	NM_174869.1		3421	28178837	NM_174869.1	IDH3G	NP_777358.1	ILMN_1802706	0006220367	A	1188	GATGCTGGACCACCTCAAGCTGCACTCCTATGCCACCTCCATCCGTAAGG	X	-	153051695-153051727:153051810-153051826	Xq28f	Homo sapiens isocitrate dehydrogenase 3 (NAD+) gamma (IDH3G), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 14555658] [evidence EXP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9286695] [evidence NAS]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle [goid 6102] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH + H+ [goid 4449] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	H-IDHG	H-IDHG
Homo sapiens	RefSeq	NM_174869.1	ILMN_14606	IDH3G	NM_174869.1	NM_174869.1		3421	28178837	NM_174869.1	IDH3G	NP_777358.1	ILMN_1682762	0001090136	I	1385	CATCTTCTGGCCCTTAGCTGGTGCCACTTCCCTCCTGTGGCAATCCCAGT	X	-	153051498-153051547	Xq28f	Homo sapiens isocitrate dehydrogenase 3 (NAD+) gamma (IDH3G), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 14555658] [evidence EXP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9286695] [evidence NAS]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways involving isocitrate, the anion of isocitric acid, 1-hydroxy-1,2,3-propanetricarboxylic acid. Isocitrate is an important intermediate in the TCA cycle and the glycoxylate cycle [goid 6102] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH + H+ [goid 4449] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP [goid 16616] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	H-IDHG	H-IDHG
Homo sapiens	Unigene	Hs.335525	ILMN_86657	HS.335525	Hs.335525		Hs.335525		21006960	BQ343012			ILMN_1904931	0004610202	S	446	AACCCTAGCCACAGGAGGACTCAAGAAAGGAAGTTGTTTCCTTGGCAGAC	6	+	73963496-73963531		QV2-NN0045-031200-511-f08 NN0045 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_022899.3	ILMN_13548	ACTR8	NM_022899.3	NM_022899.3		93973	39812114	NM_022899.3	ACTR8	NP_075050.3	ILMN_1689162	0000270278	S	3149	GCCGGTACCTGAGCATTTTGTATCAATGGGAGTACCCTCTGTAACTGCTC	3	-	53901481-53901530	3p21.1a	Homo sapiens ARP8 actin-related protein 8 homolog (yeast) (ACTR8), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ12934; ARP8; FLJ22579	FLJ12934; ARP8; FLJ22579
Homo sapiens	RefSeq	NM_002005.2	ILMN_27340	FES	NM_002005.2	NM_002005.2		2242	13376997	NM_002005.2	FES	NP_001996.1	ILMN_1693650	0004120689	S	2587	GGTGCAGCTCCTCAGCGGCTCCAGCTCATATGCTGACAGCTCTTCACAGT	15	+	89239835-89239884	15q26.1c	Homo sapiens feline sarcoma oncogene (FES), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 6183005] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 6264598] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 6264598] [evidence TAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate [goid 4715] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FPS	FPS
Homo sapiens	RefSeq	XM_926283.1	ILMN_38383	LOC642902	XM_926283.1	XM_926283.1		642902	88995787	XM_926283.1	LOC642902	XP_931376.1	ILMN_1703077	0007210646	S	1	ATGATTTCATTGAACTGTAAGTTAAGACTGCCCTGTGACCACTTTGGGCT	6	-	68901830-68901879		PREDICTED: Homo sapiens hypothetical protein LOC642902 (LOC642902), mRNA.					
Homo sapiens	Unigene	Hs.575583	ILMN_127764	HS.575583	Hs.575583		Hs.575583		13457773	BG496257			ILMN_1880052	0002470450	S	307	GCTGCAGAATTGAGGGTGGGCCTTAGACCTGGTATGTGGAGGAGAGAATG	8	+	25424180-25424229		602538216F1 NIH_MGC_59 Homo sapiens cDNA clone IMAGE:4659674 5, mRNA sequence					
Homo sapiens	RefSeq	XM_929859.1	ILMN_32271	LOC646897	XM_929859.1	XM_929859.1		646897	89038485	XM_929859.1	LOC646897	XP_934952.1	ILMN_1693225	0005310162	S	1889	CCTCTGTTGAGTTTCCATTTCAGGTTGTGGCCAGGCATGGTGGCTCATGC	15	+	76230663-76230712		PREDICTED: Homo sapiens hypothetical protein LOC646897 (LOC646897), mRNA.					
Homo sapiens	RefSeq	XM_933686.1	ILMN_39236	LOC644150	XM_933686.1	XM_933686.1		644150	89024717	XM_933686.1	LOC644150	XP_938779.1	ILMN_1651253	0003830112	I	1513	CCCACCCCATGCTCAAGCTGTAATTCAGTTGGCATACAGGCTTGGAATTG	7	+	29920718-29920767	7p15.1c-p15.1b	PREDICTED: Homo sapiens similar to SH3 domain binding protein CR16, transcript variant 2 (LOC644150), mRNA.					
Homo sapiens	RefSeq	XM_928281.1	ILMN_44121	LOC645241	XM_928281.1	XM_928281.1		645241	88952993	XM_928281.1	LOC645241	XP_933374.1	ILMN_1671585	0003140309	S	1828	GAGGTGTTGGACTCAGTTTATTCTAGCAGGCCCAACCTCCAAGACCATCC	2	-	13586218-13586267		PREDICTED: Homo sapiens hypothetical protein LOC645241 (LOC645241), mRNA.					
Homo sapiens	RefSeq	NM_001037540.1	ILMN_163338	SCML1	NM_001037540.1	NM_001037540.1		6322	82830431	NM_001037540.1	SCML1	NP_001032629.1	ILMN_2340908	0005570646	A	840	ACCCGATCCTCAGCCGCACTCCGAGTCCAGTGCATCCCTCAGATTTCTCT	X	+	17678146-17678195	Xp22.13d	Homo sapiens sex comb on midleg-like 1 (Drosophila) (SCML1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9570953] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9570953] [evidence TAS]		
Homo sapiens	RefSeq	NM_006746.3	ILMN_163338	SCML1	NM_001037540.1	NM_001037540.1		6322	82830431	NM_001037540.1	SCML1	NP_001032629.1	ILMN_1776653	0001430152	S	2360	CTGTAGATTGGTTTCCATACAGGGAAGTTCTCCGTCCTATGCAATGTTTC	X	+	17682478-17682527	Xp22.13d	Homo sapiens sex comb on midleg-like 1 (Drosophila) (SCML1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9570953] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9570953] [evidence TAS]		
Homo sapiens	RefSeq	NM_001037540.1	ILMN_163338	SCML1	NM_001037540.1	NM_001037540.1		6322	82830431	NM_001037540.1	SCML1	NP_001032629.1	ILMN_2257377	0005820762	I	367	AAGAATACCTACTTACGATGAAGATGACAACACTATTCTTTATGCGTATG	X	+	17673505-17673554	Xp22.13d	Homo sapiens sex comb on midleg-like 1 (Drosophila) (SCML1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9570953] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9570953] [evidence TAS]		
Homo sapiens	RefSeq	NM_018048.2	ILMN_493	MAGOHB	NM_018048.2	NM_018048.2		55110	21361685	NM_018048.2	MAGOHB	NP_060518.1	ILMN_1676058	0000110348	S	2523	TTGCGCTCAGGTTATGTTCCTTTTACCTCCTTCCTTAATAAAGAGACCAC	12	-	10756800-10756849	12p13.2c	Homo sapiens mago-nashi homolog B (Drosophila) (MAGOHB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	magoh; mago	magoh; mago
Homo sapiens	RefSeq	NM_000824.2	ILMN_169677	GLRB	NM_000824.2	NM_000824.2		2743	24431943	NM_000824.2	GLRB	NP_000815.1	ILMN_1669631	0000060603	S	1515	GCCTCCCCCTGCGAAACCTGTTATTCCAACAGCAGCAAAGCGAATTGATC	4	+	158311210-158311259	4q32.1c-q32.1d	Homo sapiens glycine receptor, beta (GLRB), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8717357] [evidence NAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	An action or movement due to the application of a sudden unexpected stimulus [goid 1964] [pmid 11929858] [evidence IMP]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 8717357] [evidence IDA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 8717357] [evidence IDA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 11929858] [evidence IMP]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 11929858] [evidence IMP]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11929858] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15215304] [evidence IPI]; Interacting selectively with glycine, aminoethanoic acid [goid 16594] [pmid 15748848] [evidence IMP]; Catalysis of the transmembrane transfer of a chloride ion by a channel that opens when extracellular glycine has been bound by the channel complex or one of its constituent parts [goid 16934] [pmid 8717357] [evidence IDA]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]		
Homo sapiens	RefSeq	XM_926225.1	ILMN_33528	LOC642820	XM_926225.1	XM_926225.1		642820	89031535	XM_926225.1	LOC642820	XP_931318.1	ILMN_1651221	0002490538	S	61	GCCGCCCCCTGCTTCACGGAGCCTGGTCCCATCAACCGCCGAAGGGCTGA	10	+	83534280-83534329		PREDICTED: Homo sapiens hypothetical protein LOC642820 (LOC642820), mRNA.					
Homo sapiens	RefSeq	NM_012466.2	ILMN_20606	TSPAN16	NM_012466.2	NM_012466.2		26526	21265098	NM_012466.2	TSPAN16	NP_036598.1	ILMN_1743465	0006900070	S	695	CCATCGGAAGTGTGTCCTGTGACGGACGCGATGTGTCTCCAAACGTCATC	19	+	11278374-11278423	19p13.2b	Homo sapiens tetraspanin 16 (TSPAN16), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10500248] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TM4SF16; TM4-B; TM-8	TM4SF16; TM4-B; TM-8
Homo sapiens	RefSeq	NM_000068.2	ILMN_21024	CACNA1A	NM_000068.2	NM_000068.2		773	13386499	NM_000068.2	CACNA1A	NP_000059.2	ILMN_2340815	0006110019	A	6469	TCTCAGTCCGTGGAGATGCGAGAGATGGGCAGAGATGGCTACTCCGACAG	19	-	13183983-13184030:13184198-13184199	19p13.13b-p13.13a	Homo sapiens calcium channel, voltage-dependent, P/Q type, alpha 1A subunit (CACNA1A), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16595610] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16595610] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16595610] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8825650] [evidence EXP]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 16595610] [evidence TAS]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [pmid 16595610] [evidence IDA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The chemical reactions and pathways involving amino acids containing sulfur, comprising cysteine, homocysteine, methionine and selenocysteine [goid 96] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [evidence ISS]; The series of molecular signals generated by the binding of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, to a cell surface receptor [goid 7214] [evidence IEA]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [evidence IEA]; The biosynthesis of a synapse [goid 7416] [evidence IEA]; The actions or reactions of an adult relating to the progression of that organism along the ground by the process of lifting and setting down each leg [goid 7628] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 16595610] [evidence IDA]; The regulated release of gamm-aminobutyric acid by a cell or group of cells. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues [goid 14051] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of acetylcholine [goid 14056] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]; Any process that modulates the frequency, rate or extent of calcium ion-dependent exocytosis [goid 17158] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellum to attain its fully functional state. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills [goid 21590] [evidence IEA]; The process whose specific outcome is the progression of the cerebellar molecular layer nerve over time, from its formation to the mature structure. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells [goid 21679] [evidence IEA]; The process whose specific outcome is the progression of the cerebellar Purkinje cell layer over time, from its formation to the mature structure. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells [goid 21680] [evidence IEA]; The process whereby neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem [goid 21702] [evidence IEA]; The process whose specific outcome is the progression of the vestibular nucleus over time, from its formation to the mature structure [goid 21750] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the central nervous system [goid 21953] [evidence IEA]; The regulation of the levels, transport, and metabolism of chloride ions within a cell or between a cell and its external environment [goid 30644] [evidence IEA]; Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones [goid 32353] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate [goid 35249] [evidence IEA]; The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42133] [evidence IEA]; The chemical reactions and pathways involving any of the compounds secreted by the thyroid gland, largely thyroxine and triiodothyronine [goid 42403] [evidence IEA]; Grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response [goid 43113] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; A change in the behavior of an organism as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48266] [evidence IEA]; The release of a neurotransmitter into the synaptic cleft, where the release step is dependent on the presence of calcium ions (Ca2+). The neurotransmitter is contained within a membrane-bounded vesicle, and is released by fusion of the vesicle with the presynaptic plasma membrane of a nerve cell [goid 48791] [evidence IEA]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IEA]; Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron [goid 50770] [evidence IEA]; Involuntary movement caused by the application of a stimulus to an organism and a subsequent movement. The signal processing of this movement takes place in the spinal cord [goid 50883] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]; The process in which membrane potential changes in the depolarizing direction from the resting potential, usually from negative to positive. For example, the initial depolarization during the rising phase of an action potential is in the direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential [goid 51899] [evidence IEA]; Any process involved in the generation of rhythmic, synchronous synaptic inputs in a neural circuit [goid 60024] [evidence IEA]	Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8692999] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11865310] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a high voltage-gated channel [goid 8331] [evidence IEA]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [pmid 8692999] [evidence IDA]	FHM; CAV2.1; CACNL1A4; SCA6; HPCA; MHP1; APCA; MHP; EA2	FHM; CAV2.1; CACNL1A4; SCA6; HPCA; MHP1; APCA; MHP; EA2
Homo sapiens	Unigene	Hs.99150	ILMN_74593	HS.99150	Hs.99150		Hs.99150		21168706	BQ429630			ILMN_1855401	0003180167	S	33	GGGAAGTAGATGCCCAGAGAGAGAATGGAGAACAAACAGAGAAGGAAGCC					AGENCOURT_7836963 NIH_MGC_82 Homo sapiens cDNA clone IMAGE:6102160 5, mRNA sequence					
Homo sapiens	RefSeq	XM_926984.1	ILMN_176449	LOC728481	XR_015292.1	XR_015292.1		728481	113402452	XR_015292.1	LOC728481		ILMN_1700674	0006900458	S	164	CCTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCGCAGCCACACGCAA	1	-	218531-218580	1p36.33b	PREDICTED: Homo sapiens similar to similar to RPL23AP7 protein (LOC728481), mRNA.					
Homo sapiens	Unigene	Hs.525976	ILMN_100732	HS.525976	Hs.525976		Hs.525976		51476088	XM_373970			ILMN_1830064	0000460184	S	528	CCATGGCTGGCAGAGCAGGGGAGTCCATCACTGTCTGATGGTTCATGAGC					PREDICTED: Homo sapiens hypothetical LOC388917 (LOC388917), mRNA					
Homo sapiens	RefSeq	XM_925944.1	ILMN_31966	LOC653092	XM_925944.1	XM_925944.1		653092	89060267	XM_925944.1	LOC653092	XP_931037.1	ILMN_1677552	0001340767	S	241	CCTCTCTGGTTCCCCGGACTCCTCTTAGCCCCCTCGTGGCCTGATGGGCG	X	+	144707793-144707842		PREDICTED: Homo sapiens similar to SLIT and NTRK-like family, member 2 (LOC653092), mRNA.					
Homo sapiens	RefSeq	XR_017414.1	ILMN_164169	LOC645405	XR_017414.1	XR_017414.1		645405	113425207	XR_017414.1	LOC645405		ILMN_3211630	0005890327	A	558	GAGGAGAATTTGCCCTTTGGCTTGATGGAGATCTCTACCATGCAAGAAGC	15	+	46805184-46805233	15q21.1d	PREDICTED: Homo sapiens misc_RNA (LOC645405), miscRNA.					
Homo sapiens	RefSeq	XR_038996.1	ILMN_347915	LOC344328	XR_038996.1	XR_038996.1		344328	169164397	XR_038996.1	LOC344328		ILMN_3290627	0002260091	M	899	CGGAGGGGGCATACCAGGAGTGGCCAGAATGCCTGGGCTTAATGAAATTC				2q32.1f	PREDICTED: Homo sapiens misc_RNA (LOC344328), miscRNA.					
Homo sapiens	RefSeq	NM_023073.2	ILMN_168167	C5ORF42	NM_023073.2	NM_023073.2		65250	38604072	NM_023073.2	C5orf42	NP_075561.2	ILMN_2232494	0004480398	S	7963	GCAGCAAGTTGAATGCAGAAGCAGGTATGGTAATTCAGCTGCCTTCTATC	5	-	37142515-37142564	5p13.2b	Homo sapiens chromosome 5 open reading frame 42 (C5orf42), mRNA.				DKFZp686K02105; FLJ13231; FLJ21126	DKFZp686K02105; FLJ13231; FLJ21126
Homo sapiens	RefSeq	NM_004677.2	ILMN_1499	XKRY	NM_004677.2	NM_004677.2		9082	50363368	NM_004677.2	XKRY	NP_004668.2	ILMN_1697937	0001980274	S	181	TCCTGTTATCACCAGAGTCTAAAACACAGTTTATATTGCATTCACCTCCT	Y	-	19882210-19882259	Yq11.221f	Homo sapiens XK, Kell blood group complex subunit-related, Y-linked (XKRY), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [pmid 9381176] [evidence TAS]		XKRY1	XKRY1
Homo sapiens	RefSeq	XR_018133.2	ILMN_164410	LOC389404	XR_018133.2	XR_018133.2		389404	169168724	XR_018133.2	LOC389404		ILMN_3200661	0003130324	A	42	TGTGAAGGGCCCCAGAGGAACCCTGCGGAGGGACTTCAATCACATCAGTA				6q12a	PREDICTED: Homo sapiens misc_RNA (LOC389404), miscRNA.					
Homo sapiens	RefSeq	XR_018133.2	ILMN_164410	LOC389404	XR_018133.2	XR_018133.2		389404	169168724	XR_018133.2	LOC389404		ILMN_3277137	0005290035	M	128	CAAGTTGACAAACGGTGGGGGAACAGAAAGAAACTGGCTACCGTTCGGAC				6q12a	PREDICTED: Homo sapiens misc_RNA (LOC389404), miscRNA.					
Homo sapiens	RefSeq	NM_001105281.1	ILMN_337552	FABP12	NM_001105281.1	NM_001105281.1		646486	157427690	NM_001105281.1	FABP12	NP_001098751.1	ILMN_3248038	0006400193	S	55	GACTACATGAAGGAGCTGGGTATAGGAAGAGCCAGCAGGAAACTGGGCCG	8	-	82604369-82604400:82606033-82606050	8q21.13b-q21.13c	Homo sapiens fatty acid binding protein 12 (FABP12), mRNA.					
Homo sapiens	RefSeq	XM_927850.1	ILMN_34275	LOC653203	XM_932353.2	XM_932353.2		653203	113429312	XM_932353.2	LOC653203	XP_937446.1	ILMN_1698523	0001770563	A	130	GCGTGTGAAAAGGAAGCCCTACTCTACCACCAAGGTGACTTCAGGGAGCA	22	+	19025304-19025337:19025806-19025821	22q11.21d	PREDICTED: Homo sapiens similar to hypothetical gene supported by BC039313, transcript variant 2 (LOC653203), mRNA.					
Homo sapiens	RefSeq	XM_931189.1	ILMN_34275	LOC653203	XM_932353.2	XM_932353.2		653203	113429312	XM_932353.2	LOC653203	XP_937446.1	ILMN_1652761	0001940040	I	444	TGTGTGCAAGTCTGCATGATTTGCTTGTGAATGTGTGTCTATGTGTGTTT	22	+	19026086-19026135	22q11.21d	PREDICTED: Homo sapiens similar to hypothetical gene supported by BC039313, transcript variant 2 (LOC653203), mRNA.					
Homo sapiens	RefSeq	XM_932729.1	ILMN_34275	LOC653203	XM_932353.2	XM_932353.2		653203	113429312	XM_932353.2	LOC653203	XP_937446.1	ILMN_1661715	0002140672	I	344	TGACATACTCTTTTTATCTATGTATAGTTTCTGGGAACATGTTCACATTA	22	+	19025986-19026035	22q11.21d	PREDICTED: Homo sapiens similar to hypothetical gene supported by BC039313, transcript variant 2 (LOC653203), mRNA.					
Homo sapiens	RefSeq	XM_932353.1	ILMN_34275	LOC653203	XM_932353.2	XM_932353.2		653203	113429312	XM_932353.2	LOC653203	XP_937446.1	ILMN_1688817	0005550072	I	452	AGTCTGCATGATTTGCTTGTGAATGTGTGTCTATGTGTGTTTCCCCTAGG	22	+	19026094-19026143	22q11.21d	PREDICTED: Homo sapiens similar to hypothetical gene supported by BC039313, transcript variant 2 (LOC653203), mRNA.					
Homo sapiens	RefSeq	XM_943761.1	ILMN_42030	LOC649540	XM_943761.1	XM_943761.1		649540	88968728	XM_943761.1	LOC649540	XP_948854.1	ILMN_1673630	0002970468	S	807	CTGTGAGGATCCGTTAGCAATGTTTATGATGGGCAAGTCTTGTGATGGGG					PREDICTED: Homo sapiens hypothetical protein LOC649540 (LOC649540), mRNA.					
Homo sapiens	RefSeq	XR_037916.1	ILMN_345464	LOC100132153	XR_037916.1	XR_037916.1		100132153	169168555	XR_037916.1	LOC100132153		ILMN_3287784	0007380494	M	945	CCTGGCAGCCCAGACCTGGCGAAGGGTGAAGAAGCCTGGCTCCAGAACTA				6p25.2b	PREDICTED: Homo sapiens misc_RNA (LOC100132153), miscRNA.					
Homo sapiens	RefSeq	NM_018066.2	ILMN_137220	ATPBD1B	NM_018066.2	NM_018066.2		54707	40254894	NM_018066.2	ATPBD1B	NP_060536.2	ILMN_1721741	0003420195	S	2390	TGAGTCACCCAGAATCCCATAACGGAAACTTTCTATGGGGTCATCTGTTT	1	-	27075239-27075288	1p36.11a	Homo sapiens ATP binding domain 1 family, member B (ATPBD1B), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]	FLJ10349	FLJ10349
Homo sapiens	Unigene	Hs.191701	ILMN_81126	HS.191701	Hs.191701		Hs.191701		27825424	BX092691			ILMN_1835562	0002640347	S	9	GACAGCTGCCATCTCCAGGAAGAGTTTTATATTATTACCACATAGCACAC	4	+	24912278-24912327		BX092691 NCI_CGAP_Co4 Homo sapiens cDNA clone IMAGp998D052412 ; IMAGE:968404, mRNA sequence					
Homo sapiens	RefSeq	NM_001008693.1	ILMN_176844	CST9	NM_001008693.1	NM_001008693.1		128822	57165420	NM_001008693.1	CST9	NP_001008693.1	ILMN_1702372	0004070382	S	1248	CAAACCCCGCCCTACTGTCTCTTCCTGTTTGTTCCCTCGGACCTTCAGCT	20	-	23531341-23531390	20p11.21b	Homo sapiens cystatin 9 (testatin) (CST9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		 [goid 4869] [evidence IEA]	CLM	CLM
Homo sapiens	RefSeq	NM_080829.1	ILMN_13660	C20ORF175	NM_080829.1	NM_080829.1		140876	18201885	NM_080829.1	C20orf175	NP_543019.1	ILMN_1791248	0002120129	S	2178	CCCCGTCTGTTTCTCCCACTGTCCTTGGCTCAGCTCTTGTCACTCTATCG	20	-	48647392-48647441	20q13.13f	Homo sapiens chromosome 20 open reading frame 175 (C20orf175), mRNA.				FLJ32230; dJ530I15.2; FAM65C	FLJ32230; dJ530I15.2; FAM65C
Homo sapiens	RefSeq	XM_001717661.1	ILMN_349264	LOC729041	XM_001717661.1	XM_001717661.1		729041	169160670	XM_001717661.1	LOC729041	XP_001717713.1	ILMN_3304917	0001500133	M	621	GGTGGACACCTTGGTCAAGAATCAGAGGGGGCCCAAGTGATAGGCTCCTG				1p33d	PREDICTED: Homo sapiens similar to hCG2039305 (LOC729041), mRNA.					
Homo sapiens	RefSeq	XM_001716801.1	ILMN_351974	LOC100132944	XM_001716801.1	XM_001716801.1		100132944	169209874	XM_001716801.1	LOC100132944	XP_001716853.1	ILMN_3234349	0005310372	I	1173	AACAGCACGGGCTCCGCGTCGGCTGCCAGCAGCCCGCCGGCCGCCACTTA	16	-	8799307-8799356	16p13.2b	PREDICTED: Homo sapiens similar to hCG2045457 (LOC100132944), mRNA.					
Homo sapiens	RefSeq	NM_005835.1	ILMN_162410	SLC17A2	NM_005835.1	NM_005835.1		10246	5031954	NM_005835.1	SLC17A2	NP_005826.1	ILMN_1773586	0001110110	S	1931	TCCTTAGAGGTTTCTAGCATGCGCCCGGGGTTGACAACAGCTGGACAAAC	6	-	26021250-26021299	6p22.2a	Homo sapiens solute carrier family 17 (sodium phosphate), member 2 (SLC17A2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9149941] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9149941] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 9149941] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [pmid 9149941] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in) [goid 5436] [pmid 9149941] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	MGC138238; NPT3	MGC138238; NPT3
Homo sapiens	RefSeq	NM_001134335.1	ILMN_366668	EIF2AK1	NM_001134335.1	NM_001134335.1		27102	197245436	NM_001134335.1	EIF2AK1	NP_001127807.1	ILMN_3250614	0004120154	M	4157	ATCGCTATGTGGCCAGTATGCCACAGAATGTCCTAAACCCTTGCTGCCTC	7	-	6062133-6062182	7p22.1b	Homo sapiens eukaryotic translation initiation factor 2-alpha kinase 1 (EIF2AK1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 11036079] [evidence IEP]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [pmid 11036079] [evidence IEP]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [evidence IEA]; Any process involving iron that stops, prevents or reduces the rate of translational initiation [goid 45993] [pmid 11036079] [evidence NAS]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 46986] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin [goid 46986] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Catalysis of the phosphorylation of the alpha subunit of eukaryotic translation initiation factor 2 (EIF2) [goid 4694] [pmid 11036079] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]		
Homo sapiens	RefSeq	XM_497517.2	ILMN_42417	LOC441773	XM_497517.2	XM_497517.2		441773	89040514	XM_497517.2	LOC441773	XP_497517.2	ILMN_1771757	0000630484	S	789	GTTTATCGGAAAGAGGCTGGTGGTCGGGACCAGTAGGAGGATCGCTTGAG	16	-	72983850-72983899		PREDICTED: Homo sapiens similar to Group X secretory phospholipase A2 precursor (Phosphatidylcholine 2-acylhydrolase GX) (GX sPLA2) (sPLA2-X) (LOC441773), mRNA.					
Homo sapiens	RefSeq	NR_024157.1	ILMN_363919	DGCR11	NR_024157.1	NR_024157.1		25786	205830444	NR_024157.1	DGCR11		ILMN_3236211	0007570142	S	1846	GCCAGTGCCAGAAGGCAAGAAGAAATGAAAAACCATCCAGGCCAGAGGGG	22	-	19033993-19034042		Homo sapiens DiGeorge syndrome critical region gene 11 (DGCR11), non-coding RNA.					
Homo sapiens	RefSeq	NM_014689.1	ILMN_15188	DOCK10	NM_014689.2	NM_014689.2		55619	154146188	NM_014689.2	DOCK10	NP_055504.2	ILMN_1702301	0001710736	S	7055	CCCTAAGTTTGCTGTCAGTTATTGTATGGTCAGTACCCCAGTCCTAGTAC	2	-	225630133-225630182	2q36.2a	Homo sapiens dedicator of cytokinesis 10 (DOCK10), mRNA.			Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]; Interacting selectively with a GTPase, any enzyme that catalyzes the hydrolysis of GTP [goid 51020] [evidence IEA]	Nbla10300; DKFZp781A1532; DRIP2; ZIZ3	Nbla10300; DKFZp781A1532; DRIP2; ZIZ3
Homo sapiens	RefSeq	XM_931786.1	ILMN_181254	LOC220729	NR_003266.1	NR_003266.1		220729	118130961	NR_003266.1	LOC220729		ILMN_1711845	0005260543	I	14421	CTCTGACCCAACCAATCAGCACTCCCCATACCCTAGCCTGCTACCTACCA				3q29h	Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein pseudogene (LOC220729) on chromosome 3.					
Homo sapiens	RefSeq	XM_942650.1	ILMN_181254	LOC220729	NR_003266.1	NR_003266.1		220729	118130961	NR_003266.1	LOC220729		ILMN_1701392	0004010360	I	9699	TGTGTATTAAGTTGATTGTGTCATCAGTTCACAAAATAAATCATCACGCT				3q29h	Homo sapiens succinate dehydrogenase complex, subunit A, flavoprotein pseudogene (LOC220729) on chromosome 3.					
Homo sapiens	RefSeq	XM_942814.1	ILMN_41308	LOC647363	XM_942814.1	XM_942814.1		647363	88952921	XM_942814.1	LOC647363	XP_947907.1	ILMN_1737849	0004060369	S	65	CGAGACCAAGAGCAATGATTATGAATGGCAAGTGGCAAGAAACGGGGTGG					PREDICTED: Homo sapiens hypothetical protein LOC647363 (LOC647363), mRNA.					
Homo sapiens	RefSeq	NM_138786.1	ILMN_5533	TM4SF18	NM_138786.1	NM_138786.1		116441	20270326	NM_138786.1	TM4SF18	NP_620141.1	ILMN_2169966	0004830156	S	878	GCAGTCCTCACTGCACATGCAAGTATACCACCCTTCCATTTAGTATGTTT	3	-	150521770-150521819	3q25.1a	Homo sapiens transmembrane 4 L six family member 18 (TM4SF18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			L6D	L6D
Homo sapiens	RefSeq	XM_937207.1	ILMN_40074	LIPL2	XM_937207.1	XM_937207.1		643414	89033528	XM_937207.1	LIPL2	XP_942300.1	ILMN_2176693	0003890026	S	922	TGGGGAAACTCTGATCAGAACATGATGCACTTCCACCAGCTTACACCTCC				10q23.31b	PREDICTED: Homo sapiens lipase-like, ab-hydrolase domain containing 2 (LIPL2), mRNA.					
Homo sapiens	RefSeq	XR_037654.1	ILMN_350212	LOC100128825	XR_037654.1	XR_037654.1		100128825	169162855	XR_037654.1	LOC100128825		ILMN_3270559	0005420468	M	1354	CATTTCGGTGGTGATGCTGGAACGCACTGCTGAAAACTTGGAGGACTTCG	1	-	243353505-243353554	1q44b	PREDICTED: Homo sapiens misc_RNA (LOC100128825), miscRNA.					
Homo sapiens	RefSeq	NM_147129.2	ILMN_15910	ALS2CL	NM_147129.2	NM_147129.2		259173	33359214	NM_147129.2	ALS2CL	NP_667340.2	ILMN_1700596	0004060037	I	1619	GGCATCCTCCTCTCTGAAGACGACTCCCTGTATGAGGGCACCTTCACCAG	3	-	46720721-46720770	3p21.31h	Homo sapiens ALS2 C-terminal like (ALS2CL), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [pmid 17239822] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17239822] [evidence IPI]	MGC129698; RN49018; DKFZp686P238	MGC129698; RN49018; DKFZp686P238
Homo sapiens	RefSeq	NM_147129.2	ILMN_15910	ALS2CL	NM_147129.2	NM_147129.2		259173	33359214	NM_147129.2	ALS2CL	NP_667340.2	ILMN_1702322	0004570630	A	4447	TGAGTTCATGCGATGCTGACGGGACCCCAGCACACTTCCCTGCCTCCTTT	3	-	46710903-46710952	3p21.31h	Homo sapiens ALS2 C-terminal like (ALS2CL), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of endosomes [goid 7032] [pmid 17239822] [evidence IGI]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17239822] [evidence IPI]	MGC129698; RN49018; DKFZp686P238	MGC129698; RN49018; DKFZp686P238
Homo sapiens	RefSeq	XM_001727024.1	ILMN_351337	LOC100128542	XM_001727024.1	XM_001727024.1		100128542	169171600	XM_001727024.1	LOC100128542	XP_001727076.1	ILMN_3234197	0000150673	I	255	GGAGATTTTATCCATAAGGAGCCAAACAAAGCTGCTGTGCTCTGCAATGC				7q36.1c	PREDICTED: Homo sapiens hypothetical protein LOC100128542 (LOC100128542), mRNA.					
Homo sapiens	RefSeq	NM_014187.3	ILMN_20854	TMEM208	NM_014187.3	NM_014187.3		29100	157311582	NM_014187.3	TMEM208	NP_054906.2	ILMN_3239055	0004120066	S	505	CCTTTACCTCCTGTGGGTGAATGTGCTGGGCCCCTGGTTCACTGCAGACA	16	+	65820394-65820443	16q22.1a	Homo sapiens transmembrane protein 208 (TMEM208), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HSPC171	
Homo sapiens	RefSeq	NM_003784.1	ILMN_8141	SERPINB7	NM_003784.2	NM_003784.2		8710	92859646	NM_003784.2	SERPINB7	NP_003775.1	ILMN_1767685	0007200243	S	1733	GTCTTTCTTCCCACGCTCATTTCTATCATTCTCCCCCATGACCCGTCTGG	18	+	59623082-59623131	18q21.33b	Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 7 (SERPINB7), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 9710452] [evidence TAS]	MEGSIN; MGC120014; MGC120015; DKFZp686D06190	MEGSIN; MGC120014; DKFZp686D06190; MGC120015
Homo sapiens	RefSeq	NM_003784.2	ILMN_8141	SERPINB7	NM_003784.2	NM_003784.2		8710	92859646	NM_003784.2	SERPINB7	NP_003775.1	ILMN_2395139	0000450463	A	1765	CCCCCATGACCCGTCTGGAAATTATGGAGAGTGCTCAACTGGTAAGGAGA	18	+	59623114-59623163	18q21.33b	Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 7 (SERPINB7), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 9710452] [evidence TAS]	MEGSIN; MGC120014; MGC120015; DKFZp686D06190	MEGSIN; MGC120014; DKFZp686D06190; MGC120015
Homo sapiens	RefSeq	XM_001726345.1	ILMN_341090	LOC642623	XM_001726345.1	XM_001726345.1		642623	169203125	XM_001726345.1	LOC642623	XP_001726397.1	ILMN_3206537	0006620736	A	1139	GCAGTAACTCTTCAGACTGCAGCAGTGGAGAAGAAATAGAAGTTGATGTC				11q14.3b	PREDICTED: Homo sapiens hypothetical LOC642623 (LOC642623), mRNA.					
Homo sapiens	Unigene	Hs.124358	ILMN_76017	HS.124358	Hs.124358		Hs.124358		19760514	BQ025235			ILMN_1844755	0006560184	S	177	TACATGGTTGTTGGCAGAATGCAGCTCCTCATAGGCTGTTAAGCCAAGGC	15	+	70540026-70540075		UI-1-BB1p-aub-f-06-0-UI.s1 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-aub-f-06-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_930174.1	ILMN_32343	LOC653479	XM_930174.1	XM_930174.1		653479	89041624	XM_930174.1	LOC653479	XP_935267.1	ILMN_1713862	0002340538	I	858	CCTGCAAGTGTTGGGACCTTGTGCCAGAATAGCTGCCTTTTTCACCCCAT	17	-	42915077-42915126	17q21.32b	PREDICTED: Homo sapiens similar to mitochondrial ribosomal protein L45, transcript variant 1 (LOC653479), mRNA.					
Homo sapiens	RefSeq	NM_030653.3	ILMN_11422	DDX11	NM_030653.3	NM_030653.3		1663	100913201	NM_030653.3	DDX11	NP_085911.2	ILMN_2260120	0000380209	I	2326	TCTGTAACCTGTGCGGTGTGGTTCCTGGAGGGGTGGTCTGTTTCTTCCCC	12	+	31146056-31146105	12p11.21b	Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9013641] [evidence TAS]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [pmid 9013641] [evidence TAS]; Progression through S phase, the part of the mitotic cell cycle during which DNA synthesis takes place [goid 84] [pmid 9013641] [evidence TAS]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 9013641] [evidence TAS]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9013641] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]	CHL1; KRG2; MGC9335; CHLR1; MGC133249	CHL1; KRG2; MGC9335; CHLR1; MGC133249
Homo sapiens	RefSeq	NM_030653.3	ILMN_11422	DDX11	NM_030653.3	NM_030653.3		1663	100913201	NM_030653.3	DDX11	NP_085911.2	ILMN_2345908	0004890750	A	3661	GGGCCGTTAGGCTCTCAACATGACTATAGAGACCCCGTGTCATCACGGAG	12	+	31148726-31148775	12p11.21b	Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9013641] [evidence TAS]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [pmid 9013641] [evidence TAS]; Progression through S phase, the part of the mitotic cell cycle during which DNA synthesis takes place [goid 84] [pmid 9013641] [evidence TAS]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 9013641] [evidence TAS]; The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 9013641] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of the DNA helix [goid 4003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]	CHL1; KRG2; MGC9335; CHLR1; MGC133249	CHL1; KRG2; MGC9335; CHLR1; MGC133249
Homo sapiens	RefSeq	NM_181624.1	ILMN_11738	KRTAP23-1	NM_181624.1	NM_181624.1		337963	31790999	NM_181624.1	KRTAP23-1	NP_853655.1	ILMN_1666823	0004810347	S	38	ATTCCTGTGAGGGCTACCTGTGCTACTCAGGCTACTCCCGTGGTGGCTCC	21	-	31720837-31720886	21q22.11a	Homo sapiens keratin associated protein 23-1 (KRTAP23-1), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]		Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	KAP23.1	KAP23.1
Homo sapiens	RefSeq	XM_932328.1	ILMN_42652	LOC283104	XM_944648.2	XM_944648.2		283104	113422747	XM_944648.2	LOC283104	XP_949741.1	ILMN_1743040	0007650687	A	1543	GCCTGCACTCAGACACATATCCACACAGATACCCACAGATGCCGCGTGCC				11p15.4a	PREDICTED: Homo sapiens hypothetical protein LOC283104 (LOC283104), mRNA.					
Homo sapiens	RefSeq	NM_002457.2	ILMN_177386	MUC2	NM_002457.2	NM_002457.2		4583	116284391	NM_002457.2	MUC2	NP_002448.2	ILMN_2205622	0000360544	S	15382	TGCTCCTGCTGCAAAGAGGAGAAAACCAGCCAGCGTGAGGTGGTCCTGAG	11	+	1097341-1097365:1097689-1097713	11p15.5c	Homo sapiens mucin 2, oligomeric mucus/gel-forming (MUC2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell migration [goid 30336] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SMUC; MLP	SMUC; MLP
Homo sapiens	Unigene	Hs.578552	ILMN_130733	HS.578552	Hs.578552		Hs.578552		6602440	AL134253			ILMN_1857476	0007510546	S	356	GTACTACCAGAGTAAGGCCACCAACCCAAAAGCTACTTGACAGGGAGAGG	15	-	37439325-37439374		DKFZp547F154_r1 547 (synonym: hfbr1) Homo sapiens cDNA clone DKFZp547F154 5, mRNA sequence					
Homo sapiens	RefSeq	XM_940168.1	ILMN_139070	PIK4CA	XM_940168.1	XM_940168.1		5297	89059151	XM_940168.1	PIK4CA	XP_945261.1	ILMN_1790875	0003290138	I	1093	CCCACCGAGGCCCTGCATCTGAAGCAGATAGGAATAAAGACCTGAAACAA				22q11.21e	PREDICTED: Homo sapiens phosphatidylinositol 4-kinase, catalytic, alpha polypeptide, transcript variant 3 (PIK4CA), mRNA.					
Homo sapiens	RefSeq	XR_016115.2	ILMN_162026	LOC653079	XR_016115.2	XR_016115.2		653079	169203791	XR_016115.2	LOC653079		ILMN_3215954	0000510053	A	1	AGTAAACCCTTTCGGCCGGAACCGCCATCTTCCAGTAATTCGCCAAAATG	12	+	75578269-75578318	12q21.2a	PREDICTED: Homo sapiens misc_RNA (LOC653079), miscRNA.					
Homo sapiens	RefSeq	XM_001716831.1	ILMN_350927	LOC100131542	XM_001716831.1	XM_001716831.1		100131542	169165070	XM_001716831.1	LOC100131542	XP_001716883.1	ILMN_3294114	0005890079	M	529	GATTATCGGCGAGTCACTGAGGTTCCGAGAGGGGCGTCTCTGCTCACGCA	3	+	25806381-25806430	3p24.2a	PREDICTED: Homo sapiens hypothetical LOC100131542 (LOC100131542), mRNA.					
Homo sapiens	RefSeq	NM_144499.1	ILMN_21210	GNAT1	NM_144499.1	NM_144499.1		2779	22027521	NM_144499.1	GNAT1	NP_653082.1	ILMN_1750901	0006020142	I	2239	CCCATGTCCCCACATCCCTGCTCCCTCCTTCCTCATCCAGCACCAAATCT	3	+	50208773-50208822	3p21.31b	Homo sapiens guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 (GNAT1), transcript variant 1, mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8673138] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 8673138] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	GBT1; GNATR	GBT1; GNATR
Homo sapiens	RefSeq	NM_004119.1	ILMN_8780	FLT3	NM_004119.2	NM_004119.2		2322	121114303	NM_004119.2	FLT3	NP_004110.2	ILMN_1766363	0002850451	S	3019	GGATTTGGGGCTACTCTCTCCGCAGGCTCAGGTCGAAGATTCGTAGAGGA	13	-	28578184-28578188:28578189-28578233	13q12.2b	Homo sapiens fms-related tyrosine kinase 3 (FLT3), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8394751] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 7507245] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 7507245] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [pmid 8394751] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLK2; CD135; STK1	CD135; FLK2; STK1
Homo sapiens	RefSeq	NR_002473.2	ILMN_28404	LOC440354	NR_002473.2	NR_002473.2		440354	83415187	NR_002473.2	LOC440354		ILMN_2184007	0005550615	S	2053	CCTCTCCTTCTTTGTTTGATGGAGCTGTGATTAGCACTGTAACTACGGCC	16	-	29552666-29552715	16p11.2d	Homo sapiens PI-3-kinase-related kinase SMG-1 pseudogene (LOC440354), non-coding RNA.					
Homo sapiens	RefSeq	XR_000518.1	ILMN_28404	LOC440354	NR_002473.2	NR_002473.2		440354	83415187	NR_002473.2	LOC440354		ILMN_1782377	0003610612	I	1713	ATTTGACCTCAGTGCCCTGACTACAACTGGAAATGCCAAAAACTCGAGTC	16	-	29556506-29556555	16p11.2d	Homo sapiens PI-3-kinase-related kinase SMG-1 pseudogene (LOC440354), non-coding RNA.					
Homo sapiens	RefSeq	XM_001721814.1	ILMN_336230	LOC100131308	XM_001721814.1	XM_001721814.1		100131308	169165150	XM_001721814.1	LOC100131308	XP_001721866.1	ILMN_3200652	0002480707	A	1105	CTAAACGTCCCCCTTCGGAGGAAAGTGGGTCATCTGGATTGGGGGTAGCG	3	-	112771381-112771430	3q13.13d	PREDICTED: Homo sapiens similar to Polio virus receptor protein (LOC100131308), mRNA.					
Homo sapiens	RefSeq	NM_006702.2	ILMN_25524	PNPLA6	NM_006702.3	NM_006702.3		10908	116256486	NM_006702.3	PNPLA6	NP_006693.3	ILMN_1799614	0001690446	S	4378	CACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTT	19	+	7532564-7532613	19p13.2e	Homo sapiens patatin-like phospholipase domain containing 6 (PNPLA6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]; The chemical reactions and pathways involving phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline. They are important constituents of cell membranes [goid 46470] [evidence IEA]	Catalysis of the reaction: 2-lysophosphatidylcholine + H2O = glycerophosphocholine + a carboxylate [goid 4622] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	sws; NTE	sws
Homo sapiens	RefSeq	XM_371097.5	ILMN_183445	LOC388444	XM_371097.5	XM_371097.5		388444	113427206	XM_371097.5	LOC388444	XP_371097.6	ILMN_3237428	0002070672	S	1218	TTCTTTGGCTACAAGGTCTACCCGACCCTGCGCTCCCCCGGCGTCCTGCA	17	+	39788-39821:40699-40714		PREDICTED: Homo sapiens similar to notum pectinacetylesterase homolog (Drosophila) (LOC388444), mRNA.					
Homo sapiens	RefSeq	NM_019055.4	ILMN_17254	ROBO4	NM_019055.4	NM_019055.4		54538	17511434	NM_019055.4	ROBO4	NP_061928.4	ILMN_1665449	0000150612	S	3421	ATCACAGGAAGTGGAGGAGCCAGAGGTGCCTTTGTGGAGGACAGCAGTGG	11	-	124259599-124259648	11q24.2a	Homo sapiens roundabout homolog 4, magic roundabout (Drosophila) (ROBO4), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 14527427] [evidence TAS]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 15849270] [evidence IGI]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [pmid 15894287] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 14527427] [evidence TAS]	FLJ20798; MGC133353; MRB; MGC133352	FLJ20798; MGC133353; MRB; MGC133352
Homo sapiens	Unigene	Hs.552917	ILMN_111165	HS.552917	Hs.552917		Hs.552917		27832071	BX102869			ILMN_1889527	0001190484	S	107	CCTTCCCCCATGCTCTGATAGCCCTTGGTTTGCACCTATATAAAAGCACC	12	-	106021937-106021986		BX102869 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998P17421, mRNA sequence					
Homo sapiens	RefSeq	NM_201438.1	ILMN_19023	PPHLN1	NM_201438.1	NM_201438.1		51535	41872338	NM_201438.1	PPHLN1	NP_958846.1	ILMN_1805788	0002450102	I	1029	TGTTTGAGTTGACTTCACAGTCAGTTTGATCAGTATGGTCCCCCACCTGG	12	+	41079200-41079249	12q12e	Homo sapiens periphilin 1 (PPHLN1), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		HSPC206; HSPC232; MGC48786	HSPC206; HSPC232; MGC48786
Homo sapiens	RefSeq	NM_001017368.1	ILMN_18551	RFFL	NM_057178.3	NM_057178.3		117584	62865647	NM_057178.3	RFFL	NP_476519.1	ILMN_1753819	0001430424	A	3417	GGGCAGAAGCTGGCTCTCTACTTACAACCTGCTTTCTCTGCTGAAGCCTT	17	-	33336791-33336840	17q12a	Homo sapiens ring finger and FYVE-like domain containing 1 (RFFL), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF189; RNF34L	RNF189; RNF34L
Homo sapiens	RefSeq	NM_057178.3	ILMN_18551	RFFL	NM_057178.3	NM_057178.3		117584	62865647	NM_057178.3	RFFL	NP_476519.1	ILMN_1743356	0003180192	I	16	GTGAGGATGTCGCGACCGCCCCCGGGTGCCCCTCAGCCCCAGAGACGCCG	17	-	33416229-33416278	17q12a	Homo sapiens ring finger and FYVE-like domain containing 1 (RFFL), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF189; RNF34L	RNF189; RNF34L
Homo sapiens	RefSeq	NM_138389.1	ILMN_5266	FAM114A1	NM_138389.1	NM_138389.1		92689	29789372	NM_138389.1	FAM114A1	NP_612398.1	ILMN_1694070	0005700066	S	1760	GTTAGAGGGCTGCAACAGTACAACGTACATACAGGATGCCTTCCAGCTGC	4	+	38619031-38619037:38621472-38621514	4p14c	Homo sapiens family with sequence similarity 114, member A1 (FAM114A1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			Noxp20	Noxp20
Homo sapiens	RefSeq	NM_023918.1	ILMN_30294	TAS2R8	NM_023918.1	NM_023918.1		50836	12965173	NM_023918.1	TAS2R8	NP_076407.1	ILMN_2107040	0005130424	S	796	GCTGTGGAGTTTGGAGAGATTGCAGCAATTCTCTACCCCTTGGGTCACTC	12	-	10958734-10958783	12p13.2c	Homo sapiens taste receptor, type 2, member 8 (TAS2R8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 10761934] [evidence TAS]	T2R8; TRB5	T2R8; TRB5
Homo sapiens	RefSeq	NM_023918.1	ILMN_30294	TAS2R8	NM_023918.1	NM_023918.1		50836	12965173	NM_023918.1	TAS2R8	NP_076407.1	ILMN_1807159	0004040056	S	387	GGTGCACTGGATCCTGCTGGGATGCTTTGCCATTTCCTTGTTGGTCAGCC	12	-	10959143-10959192	12p13.2c	Homo sapiens taste receptor, type 2, member 8 (TAS2R8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 10761934] [evidence TAS]	T2R8; TRB5	T2R8; TRB5
Homo sapiens	RefSeq	XR_015896.2	ILMN_183501	LOC729123	XR_015896.2	XR_015896.2		729123	169167435	XR_015896.2	LOC729123		ILMN_3221790	0002630431	A	541	CATCATGCTACCAAAAATAGAGTGGGCTTCCTCAAGGAGATGGGCACACC	5	+	142692899-142692948	5q31.3e	PREDICTED: Homo sapiens similar to hCG37602 (LOC729123), mRNA.					
Homo sapiens	RefSeq	NR_031627.1	ILMN_388554	MIR1295	NR_031627.1	NR_031627.1		100302178	269847172	NR_031627.1	MIR1295		ILMN_3309264	0001940397	S	5	ATTTTGCCCAGATCCGTGGCCTATTCAGAAATGTGGCCTGTGATTAGGCC					Homo sapiens microRNA 1295 (MIR1295), microRNA.					
Homo sapiens	Unigene	Hs.580943	ILMN_133124	HS.580943	Hs.580943		Hs.580943		7454389	AW661763			ILMN_1888495	0003290598	S	149	CAGGGAAGTAGTGGGATCGGACTGGGATATGGTGAAGCTCTTGGTCATCC	21	-	38318451-38318465:38319461-38319495		hi80e01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2978616 3, mRNA sequence					
Homo sapiens	RefSeq	NM_182516.1	ILMN_2337	FLJ32011	NM_182516.1	NM_182516.1		148930	32698869	NM_182516.1	FLJ32011	NP_872322.1	ILMN_1723834	0001440725	S	1965	TCTTTGAACTGCCCTCCTCTCCACCCAGCTGCTGCCTATTCCCTGCCCCT	1	-	46784208-46784257	1p33d	Homo sapiens hypothetical protein FLJ32011 (FLJ32011), mRNA.					
Homo sapiens	RefSeq	NM_181656.1	ILMN_18190	C17ORF58	NM_181656.1	NM_181656.1		284018	31795556	NM_181656.1	C17orf58	NP_858042.1	ILMN_2398926	0000650168	A	1356	GCCTCCCTGCTCCTAGTAATGTATGTTTTGTGCTGAACTGGCAGCTATCC	17	-	63417774-63417823	17q24.2b	Homo sapiens chromosome 17 open reading frame 58 (C17orf58), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC138278	MGC138278
Homo sapiens	RefSeq	NR_030278.1	ILMN_387982	MIR552	NR_030278.1	NR_030278.1		693137	262205740	NR_030278.1	MIR552		ILMN_3308838	0006400424	S	36	GCCTGTTGGTTGAAGATGCCTTTCAACAGGTGACTGGTTAGACAAACTGT				1p34.3f	Homo sapiens microRNA 552 (MIR552), microRNA.					
Homo sapiens	RefSeq	NM_006410.3	ILMN_16008	HTATIP2	NM_006410.3	NM_006410.3		10553	34147574	NM_006410.3	HTATIP2	NP_006401.2	ILMN_1664303	0004670575	S	948	TCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCTGCATCAGTGG	11	+	20361434-20361483	11p15.1b	Homo sapiens HIV-1 Tat interactive protein 2, 30kDa (HTATIP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9482853] [evidence TAS]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 15282309] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15282309] [evidence IDA]	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9482853] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10611237] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 9174052] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [pmid 9174052] [evidence IDA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [pmid 11313954] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The directed movement of substances into the nucleus [goid 51170] [pmid 15282309] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 9482853] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9482853] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15282309] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	CC3; TIP30	CC3; TIP30
Homo sapiens	RefSeq	NM_004475.1	ILMN_168007	FLOT2	NM_004475.2	NM_004475.2		2319	94538361	NM_004475.2	FLOT2	NP_004466.2	ILMN_1726222	0002450129	S	2566	GGGGCTTGGATGTTGCACTGCCCCACTGCCTGTCCCTTCTGGTAAAATAA	17	-	27206373-27206422	17q11.2a	Homo sapiens flotillin 2 (FLOT2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A heteromeric complex of flotillin 1, flotillin 2, caveolin 1 and caveolin 2 within the caveolar membrane [goid 16600] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1769667] [evidence NAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12493773] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A heteromeric complex of flotillin 1, flotillin 2, caveolin 1 and caveolin 2 within the caveolar membrane [goid 16600] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8051082] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 8051082] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10212252] [evidence IPI]	ECS-1; ESA1; ESA; ECS1; M17S1	ECS-1; ESA1; ESA; ECS1; M17S1
Homo sapiens	RefSeq	NM_002340.3	ILMN_30260	LSS	NM_002340.3	NM_002340.3		4047	47933394	NM_002340.3	LSS	NP_002331.3	ILMN_1715024	0006450154	I	3850	TGCAGGGCTTGGTCAGCTGCCTGTTCAGTGTCAACACTTCCCTGCACATC	21	-	46433777-46433826	21q22.3f	Homo sapiens lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) (LSS), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: (S)-2,3-epoxysqualene = lanosterol. This is a cyclization reaction that forms the sterol nucleus [goid 250] [pmid 7639730] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	OSC	OSC
Homo sapiens	RefSeq	NM_001001438.1	ILMN_30260	LSS	NM_002340.3	NM_002340.3		4047	47933394	NM_002340.3	LSS	NP_002331.3	ILMN_1658271	0005890092	A	2199	TACCCTGAGAGAGCCCTTGCTGGCCACCCCTGAGAACATGCCTACCTGCT	21	-	46435428-46435445:46435446-46435477	21q22.3f	Homo sapiens lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) (LSS), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: (S)-2,3-epoxysqualene = lanosterol. This is a cyclization reaction that forms the sterol nucleus [goid 250] [pmid 7639730] [evidence TAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	OSC	OSC
Homo sapiens	RefSeq	XM_945260.1	ILMN_13610	TRERF1	NM_033502.1	NM_033502.1		55809	15812225	NM_033502.1	TRERF1	NP_277037.1	ILMN_1666556	0006110132	S	246	CCGACCGCAGGAGAAGCCCCCAGAACCAGGCCCCCAACTCAGCCATCTGC	6	-	42376363-42376412	6p21.1f-p21.1e	Homo sapiens transcriptional regulating factor 1 (TRERF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11349124] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [pmid 11349124] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [pmid 11349124] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 11349124] [evidence NAS]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 11349124] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11349124] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones [goid 46885] [pmid 11349124] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11349124] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 11349124] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [pmid 11349124] [evidence NAS]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 11349124] [evidence NAS];  [goid 30374] [pmid 11349124] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP1-139D8.5; dJ139D8.5; HSA277276; RAPA; TReP-132; BCAR2	
Homo sapiens	RefSeq	NM_033501.1	ILMN_13610	TRERF1	NM_033502.1	NM_033502.1		55809	15812225	NM_033502.1	TRERF1	NP_277037.1	ILMN_1792076	0002570661	A	4057	ACGTCGTCCAGCAGTTGGGAGGTGTCATGGAAGAGGCTGAAGTTGTGGAC	6	-	42304120-42304169	6p21.1f-p21.1e	Homo sapiens transcriptional regulating factor 1 (TRERF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11349124] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [pmid 11349124] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [pmid 11349124] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 11349124] [evidence NAS]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 11349124] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11349124] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones [goid 46885] [pmid 11349124] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11349124] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 11349124] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [pmid 11349124] [evidence NAS]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 11349124] [evidence NAS];  [goid 30374] [pmid 11349124] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP1-139D8.5; dJ139D8.5; HSA277276; RAPA; TReP-132; BCAR2	RP1-139D8.5; dJ139D8.5; HSA277276; RAPA; TReP-132
Homo sapiens	RefSeq	NM_033502.1	ILMN_13610	TRERF1	NM_033502.1	NM_033502.1		55809	15812225	NM_033502.1	TRERF1	NP_277037.1	ILMN_1690891	0007320100	I	2273	ACAGCTCCCTCCCGAGGCAGAAAGCCTCACGCCTATGGTCATGCCCGTGT	6	-	42339160-42339209	6p21.1f-p21.1e	Homo sapiens transcriptional regulating factor 1 (TRERF1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11349124] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [pmid 11349124] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6707] [pmid 11349124] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 11349124] [evidence NAS]; Any biological process involved in the maintenance of an internal equilibrium [goid 42592] [pmid 11349124] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11349124] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones [goid 46885] [pmid 11349124] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 11349124] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 11349124] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [pmid 11349124] [evidence NAS]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 11349124] [evidence NAS];  [goid 30374] [pmid 11349124] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RP1-139D8.5; dJ139D8.5; HSA277276; RAPA; TReP-132; BCAR2	RP1-139D8.5; dJ139D8.5; HSA277276; RAPA; TReP-132; BCAR2
Homo sapiens	RefSeq	XR_042485.1	ILMN_342577	LOC100128729	XR_042485.1	XR_042485.1		100128729	169171434	XR_042485.1	LOC100128729		ILMN_3261747	0003940544	M	63	GAGTCTTCCAACCAGAGCTTGTGTAGCGTCAGATCCTTGAGTGATAAAGG				7q32.1a	PREDICTED: Homo sapiens misc_RNA (LOC100128729), miscRNA.					
Homo sapiens	RefSeq	NM_007129.2	ILMN_28887	ZIC2	NM_007129.2	NM_007129.2		7546	22547196	NM_007129.2	ZIC2	NP_009060.2	ILMN_1696339	0000510368	S	2233	GCCGTGCCAAAGTCTCCCTTCTGTTTCTTCAGCACATTGACCCATAGCAC	13	+	99436571-99436620	13q32.3b	Homo sapiens Zic family member 2 (odd-paired homolog, Drosophila) (ZIC2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]	The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 9771712] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HPE5	HPE5
Homo sapiens	RefSeq	NM_000246.2	ILMN_22738	CIITA	NM_000246.2	NM_000246.2		4261	73747680	NM_000246.2	CIITA	NP_000237.1	ILMN_1773363	0004210167	S	4544	GGGTTTGAGTTCATACCCTGTTACCATTTTGGGGTACCCACTGCTCTGGT	16	+	10926233-10926282	16p13.13c	Homo sapiens class II, major histocompatibility complex, transactivator (CIITA), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 8402893] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 15771576] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 8402893] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 7749984] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16600381] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively and non-covalently with ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation [goid 43130] [pmid 14528304] [evidence IPI]	CIITA IV; MHC2TA; NLRA; C2TA	CIITA IV; MHC2TA; NLRA; C2TA
Homo sapiens	RefSeq	NM_130782.2	ILMN_25325	RGS18	NM_130782.2	NM_130782.2		64407	56682942	NM_130782.2	RGS18	NP_570138.1	ILMN_2101278	0006100397	S	1719	GAAGGTTTTTCCCAGGACGTCTCATGTTTGGCCCTTTAGAATTGGGGTAG	1	+	190421142-190421191	1q31.2a	Homo sapiens regulator of G-protein signaling 18 (RGS18), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Inhibits signal transduction the GTPase activity of G-protein alpha subunits, thereby driving them into their inactive GDP-bound form [goid 16299] [evidence IEA]	RGS13	RGS13
Homo sapiens	RefSeq	XM_001721221.1	ILMN_348915	LOC100131778	XM_001721221.1	XM_001721221.1		100131778	169183863	XM_001721221.1	LOC100131778	XP_001721273.1	ILMN_3291828	0002370491	M	62	TGCACGTCGGATTCAGGCGCACCGGATGAAGGTGAATGTGGCACGGCAGC				9p13.3a	PREDICTED: Homo sapiens hypothetical LOC100131778 (LOC100131778), mRNA.					
Homo sapiens	RefSeq	NM_025107.1	ILMN_12226	MYCT1	NM_025107.1	NM_025107.1		80177	13376676	NM_025107.1	MYCT1	NP_079383.1	ILMN_2160906	0006290706	S	790	GAGGGCATGGCCCAAATAACTCATGAGTTCCAAGTTGAAACATGGTTGTG	6	+	153085163-153085212	6q25.2a	Homo sapiens myc target 1 (MYCT1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FLJ21269; MGC156310; MGC156309; MTLC	FLJ21269; MGC156310; MGC156309; MTLC
Homo sapiens	RefSeq	NM_025107.1	ILMN_12226	MYCT1	NM_025107.1	NM_025107.1		80177	13376676	NM_025107.1	MYCT1	NP_079383.1	ILMN_1750225	0001740187	S	385	AGTGGCTGTGAACGTCGAAGCAACCTCAGCCTGGCCAGTCTCACCTTCCA	6	+	153084758-153084807	6q25.2a	Homo sapiens myc target 1 (MYCT1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			FLJ21269; MGC156310; MGC156309; MTLC	FLJ21269; MGC156310; MGC156309; MTLC
Homo sapiens	RefSeq	XM_939760.1	ILMN_36011	LOC650673	XM_939760.1	XM_939760.1		650673	89058093	XM_939760.1	LOC650673	XP_944853.1	ILMN_1744102	0003310553	S	617	TAATCGTATCCTAACCTGGCACAGAACCTCACCCTTCCTGGGAACACAGG					PREDICTED: Homo sapiens hypothetical protein LOC650673 (LOC650673), mRNA.					
Homo sapiens	RefSeq	XM_944515.1	ILMN_41719	LOC654165	XM_944515.1	XM_944515.1		654165	89035002	XM_944515.1	LOC654165	XP_949608.1	ILMN_1663495	0006510687	S	596	CTAGGAGCCTTTGTGTGTCCTGCTCACATTGTCTCCAGGGCCTCGGACAG					PREDICTED: Homo sapiens similar to glycerophosphodiester phosphodiesterase domain containing 5 (LOC654165), mRNA.					
Homo sapiens	RefSeq	NM_138414.1	ILMN_5379	CCDC101	NM_138414.1	NM_138414.1		112869	19923934	NM_138414.1	CCDC101	NP_612423.1	ILMN_1701477	0001240113	I	819	CAGTGGAAGGCCAACCCGGAGACGGACCCTGAGGCCTTGTTCCAGAAGGA	16	+	28509634-28509683	16p11.2e	Homo sapiens coiled-coil domain containing 101 (CCDC101), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		FLJ32446	FLJ32446
Homo sapiens	RefSeq	XM_941168.1	ILMN_5379	CCDC101	NM_138414.1	NM_138414.1		112869	19923934	NM_138414.1	CCDC101	NP_612423.1	ILMN_1684789	0005690131	A	1046	CAAGAAAAAGTGATGCCGCCTGGCAGACTCGCCATCCCCCAACGACACAG	16	+	28510515-28510528:28510529-28510564	16p11.2e	Homo sapiens coiled-coil domain containing 101 (CCDC101), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		FLJ32446	
Homo sapiens	RefSeq	NM_203477.1	ILMN_10471	MGC70863	NM_203477.1	NM_203477.1		284942	45238850	NM_203477.1	MGC70863	NP_982307.1	ILMN_1772081	0003460541	I	366	CACCGCTTACGGGCGAAGACTTGCTTGTCCGTGTCCTTGCCATCTAAGTG	22	+	49568538-49568587	22q13.33b	Homo sapiens similar to RPL23AP7 protein (MGC70863), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Homo sapiens	RefSeq	NM_033117.2	ILMN_8277	RBM18	NM_033117.2	NM_033117.2		92400	34147454	NM_033117.2	RBM18	NP_149108.1	ILMN_1802355	0005910195	S	582	CCTGATGCAGAGTATCCAGCAGCGCCTGTTTATTCCTACTTTAAGCCACC	9	-	124044038-124044087	9q33.2b	Homo sapiens RNA binding motif protein 18 (RBM18), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC2734; RP11-498E2.2	MGC2734; RP11-498E2.2
Homo sapiens	RefSeq	NM_033117.2	ILMN_8277	RBM18	NM_033117.2	NM_033117.2		92400	34147454	NM_033117.2	RBM18	NP_149108.1	ILMN_2222872	0005890195	S	913	GAACCCTGGGATGCTCTAATTGGCTGGTTGGTTTGGATTTGTAACTCCAG	9	-	124043707-124043756	9q33.2b	Homo sapiens RNA binding motif protein 18 (RBM18), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC2734; RP11-498E2.2	MGC2734; RP11-498E2.2
Homo sapiens	RefSeq	XM_943471.1	ILMN_30611	LOC388849	XM_943471.2	XM_943471.2		388849	113429504	XM_943471.2	LOC388849	XP_948564.2	ILMN_1676043	0006550110	S	691	TTGGCCTTTGTTAGCGTATCTGACCCCCTTCAGTGCGGGCTGCTGGGCTC				22q11.21d	PREDICTED: Homo sapiens hypothetical LOC388849 (LOC388849), mRNA.					
Homo sapiens	Unigene	Hs.541829	ILMN_105956	HS.541829	Hs.541829		Hs.541829		19594987	BM977008			ILMN_1874362	0007000241	S	564	GCACGGTGGCTCACGCCTGTTTGTTTATCTGCATTGAGGGGTGGGAAGTG	2	+	113159336-113159385		UI-CF-EN1-acz-c-09-0-UI.s1 UI-CF-EN1 Homo sapiens cDNA clone UI-CF-EN1-acz-c-09-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_930015.1	ILMN_32345	LOC647025	XM_930015.1	XM_930015.1		647025	89047186	XM_930015.1	LOC647025	XP_935108.1	ILMN_1711756	0004280446	S	123	GAAGATGATTGTGGAAAGTCACAGTGCGGTGGCCCCGGGTGGGAGGATGA	18	-	43182427-43182476	18q21.1c	PREDICTED: Homo sapiens hypothetical LOC647025 (LOC647025), mRNA.					
Homo sapiens	RefSeq	NM_033030.3	ILMN_174586	BOLL	NM_033030.3	NM_033030.3		66037	37574729	NM_033030.3	BOLL	NP_149019.1	ILMN_2329759	0000830288	A	2442	CAGCAGCAGAAATAGTAGGATATAGATCACAAAGGTTTTTCTGGTGAGTC	2	-	198300194-198300243	2q33.1b	Homo sapiens bol, boule-like (Drosophila) (BOLL), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11390979] [evidence IDA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [pmid 12499397] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of translational initiation [goid 45948] [pmid 16001084] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16001084] [evidence IPI]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [pmid 16001084] [evidence IDA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	BOULE	BOULE
Homo sapiens	RefSeq	NM_002317.3	ILMN_11693	LOX	NM_002317.3	NM_002317.3		4015	21264603	NM_002317.3	LOX	NP_002308.2	ILMN_1695880	0003940017	S	1462	CGCTGTGACATTCGCTACACAGGACATCATGCGTATGCCTCAGGCTGCAC	5	-	121433656-121433705	5q23.1e	Homo sapiens lysyl oxidase (LOX), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures [goid 5581] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 1685472] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 15609325] [evidence NAS]; Any process that determines the size and arrangement of collagen fibrils within an extracellular matrix [goid 30199] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Assembly of the extracellular matrix fibers that enables the matrix to recoil after transient stretching [goid 48251] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + H2O2 [goid 4720] [pmid 1352776] [evidence TAS]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 1357535] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC105112	MGC105112
Homo sapiens	RefSeq	NM_183009.1	ILMN_22663	KIAA1429	NM_183009.1	NM_183009.1		25962	33946279	NM_183009.1	KIAA1429	NP_892121.1	ILMN_1741841	0001470068	A	3139	GCTCCTGTGCTCTATCCCCCTCTCAGGTCGTTTGGATAGTGATGAACAGA	8	-	95592803-95592852	8q22.1b	Homo sapiens KIAA1429 (KIAA1429), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		MSTP054; MGC141940; DKFZP434I116; MGC138493; DKFZp781B2117	MSTP054; MGC141940; DKFZP434I116; MGC138493; DKFZp781B2117
Homo sapiens	RefSeq	NM_001168.2	ILMN_20443	BIRC5	NM_001168.2	NM_001168.2		332	59859877	NM_001168.2	BIRC5	NP_001159.2	ILMN_2349459	0001230682	A	2289	GCACCTGAAAGCTTCCTCGACATCTGTTAATAAAGCCGTAGGCCCTTGTC	17	+	73732969-73733018	17q25.3b	Homo sapiens baculoviral IAP repeat-containing 5 (BIRC5), transcript variant 1, mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [pmid 16291752] [evidence IDA]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence ISS]; The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [pmid 11516652] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9256286] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16291752] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [pmid 9859993] [evidence IDA]; A cellular organelle, found close to the nucleus in many eukaryotic cells, consisting of a small cylinder with microtubular walls, 300-500 nm long and 150-250 nm in diameter. It contains nine short, parallel, peripheral microtubular fibrils, each fibril consisting of one complete microtubule fused to two incomplete microtubules. Cells usually have two centrioles, lying at right angles to each other. At division, each pair of centrioles generates another pair and the twin pairs form the pole of the mitotic spindle [goid 5814] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12773388] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [pmid 11069302] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISS]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [pmid 9859993] [evidence IDA]; Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole [goid 5876] [evidence ISS]; Any microtubule in the cytoplasm of a cell [goid 5881] [pmid 9859993] [evidence IDA]; Any microtubule in the cytoplasm of a cell [goid 5881] [evidence ISS]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 9859993] [evidence IDA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 11069302] [evidence IDA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence ISS]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [pmid 16291752] [evidence IDA]; A microtubule organizing center found in interphase cells, which organize a longitudinal array of three to five MT bundles from the nuclear envelope during interphase. Each MT bundle is composed of two to seven MTs arranged in an antiparallel configuration, with the dynamic MT plus ends extending toward the cell tips and stable minus ends near the nucleus [goid 31021] [pmid 9859993] [evidence IDA]; A microtubule organizing center found in interphase cells, which organize a longitudinal array of three to five MT bundles from the nuclear envelope during interphase. Each MT bundle is composed of two to seven MTs arranged in an antiparallel configuration, with the dynamic MT plus ends extending toward the cell tips and stable minus ends near the nucleus [goid 31021] [evidence ISS]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16291752] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16291752] [evidence IMP]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16239925] [evidence IDA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence ISS]	Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [pmid 9859993] [evidence IDA]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence ISS]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 12805209] [evidence IMP]; A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [evidence ISS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10626797] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9256286] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [evidence ISS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9859993] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 12773388] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10626797] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 16291752] [evidence TAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [evidence ISS]; Any process by which a protein complex is transported to, or maintained in, a specific location [goid 31503] [pmid 16239925] [evidence IMP]; Any process that activates or increases the rate of progression from anaphase/telophase (high mitotic CDK activity) to G1 (low mitotic CDK activity) [goid 31536] [pmid 12805209] [evidence IMP]; Any process that activates or increases the rate of progression from anaphase/telophase (high mitotic CDK activity) to G1 (low mitotic CDK activity) [goid 31536] [evidence ISS]; A cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle [goid 31577] [pmid 12805209] [evidence IMP]; A cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and chromosomes are attached to the spindle [goid 31577] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 9859993] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of caspase activity [goid 43154] [pmid 12773388] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [pmid 16291752] [evidence IMP]; Any process that activates or increases the rate or extent of progression through the mitotic cell cycle [goid 45931] [evidence ISS]; The directed movement of a chromosome to a specific location [goid 51303] [pmid 12805209] [evidence IMP]; The directed movement of a chromosome to a specific location [goid 51303] [evidence ISS]	 [goid 4869] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12773388] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15628841] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291752] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11069302] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11516652] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11069302] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291752] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14610074] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291752] [evidence IPI]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 9859993] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10949039] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10876248] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16291752] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10949039] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10876248] [evidence IDA]; Stops, prevents or reduces the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43027] [pmid 9859993] [evidence IMP]; Stops, prevents or reduces the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43027] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16291752] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISS]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [pmid 12773388] [evidence IDA]; Interacting selectively with a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate [goid 48037] [evidence ISS]; Interacting selectively with a cobalt (Co) ion [goid 50897] [pmid 10949039] [evidence NAS]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 18086682] [evidence IPI]	EPR-1; API4	API4; EPR-1
Homo sapiens	Unigene	Hs.540598	ILMN_105246	HS.540598	Hs.540598		Hs.540598		2953848	AA861708			ILMN_1842593	0006450209	S	287	GTTGCTGGCTGCTGGGTGGGACTTTAGCAGGGGTTATCAGAAGGAGCACC	16	-	24155629-24155678		ak30h01.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1407505 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000297.2	ILMN_167901	PKD2	NM_000297.2	NM_000297.2		5311	33286447	NM_000297.2	PKD2	NP_000288.1	ILMN_2052891	0000070161	S	4717	ATTTGAAGTGCAGCTATTATGTGGTATCCATGTGTATCGACCATGTGCCA	4	+	88998590-88998639	4q22.1b	Homo sapiens polycystic kidney disease 2 (autosomal dominant) (PKD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10770959] [evidence TAS]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [pmid 15337773] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10760273] [evidence IPI]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8650545] [evidence TAS]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [pmid 8650545] [evidence TAS]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 10760273] [evidence TAS]; Any process by which STAT proteins (Signal Transducers and Activators of Transcription) are activated by members of the JAK (janus activated kinase) family of tyrosine kinases, following the binding of cytokines to their cognate receptor. Once activated, STATs dimerize and translocate to the nucleus and modulate the expression of target genes [goid 7259] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9171830] [evidence TAS]; The series of events by which a mechanical stimulus is received by a cell and converted into a molecular signal [goid 50982] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [pmid 8650545] [evidence TAS]; Catalysis of the transmembrane transfer of a sodium ion by a voltage-gated channel [goid 5248] [pmid 8650545] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 8650545] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9171830] [evidence TAS]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [pmid 10760273] [evidence TAS]	PC2; PKD4; APKD2; MGC138468; MGC138466	PKD4; PC2; APKD2; MGC138468; MGC138466
Homo sapiens	RefSeq	XM_001717469.1	ILMN_336551	RCADH5	XM_001717469.1	XM_001717469.1		642443	169168731	XM_001717469.1	RCADH5	XP_001717521.1	ILMN_3221865	0005490440	A	2199	CAACACTGTAGTGGAACATTCTTCTGCATTGGGCTCACTACATTAGTTAC				6q12d	PREDICTED: Homo sapiens similar to Alcohol dehydrogenase class III chi chain (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (RCADH5), mRNA.					
Homo sapiens	RefSeq	XM_928116.1	ILMN_38269	LOC653564	XM_928116.1	XM_928116.1		653564	88943400	XM_928116.1	LOC653564	XP_933209.1	ILMN_1663121	0003170768	S	198	CGGGCGGCGGCAGCCTATCCCATTTCTCTGTGAGAACTCTGAAAGCTTCA	1	+	146543173-146543187:146559619-146559653		PREDICTED: Homo sapiens similar to EGFR-coamplified and overexpressed protein (LOC653564), mRNA.					
Homo sapiens	RefSeq	NM_003864.1	ILMN_31250	SAP30	NM_003864.3	NM_003864.3		8819	91208440	NM_003864.3	SAP30	NP_003855.1	ILMN_1700896	0001780673	S	873	CAGATCTCAAGGTTGATAGTGGTGTTCACTAGGAGACGTGGAATTGAGAC	4	+	174298447-174298478:174298479-174298496	4q34.1c	Homo sapiens Sin3A-associated protein, 30kDa (SAP30), mRNA.	A protein complex that possesses histone deacetylase activity [goid 118] [pmid 9651585] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 9651585] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9874765] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12670868] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9651585] [evidence IPI]		
Homo sapiens	Unigene	Hs.562219	ILMN_115379	HS.562219	Hs.562219		Hs.562219		50719910	BP873537			ILMN_1901419	0005960086	S	93	TGGTATTTGGGCAGCTGGTGATCGTTGGTCCCGGCGCCCTTTCTTTACTG	1	+	28847792-28847841		BP873537 Sugano cDNA library, embryonal kidney Homo sapiens cDNA clone HKR13896, mRNA sequence					
Homo sapiens	RefSeq	XM_932794.1	ILMN_32685	FLJ42875	XM_932794.1	XM_932794.1		440556	88942319	XM_932794.1	FLJ42875	XP_937887.1	ILMN_1732000	0002070273	A	3476	TAGAGGCAGAAGCAGGACTCAGAGGAAGAGCACCCTGACCACAAAGCCCC	1	-	2966926-2966975		PREDICTED: Homo sapiens FLJ42875 protein, transcript variant 2 (FLJ42875), mRNA.					
Homo sapiens	RefSeq	XM_929497.1	ILMN_36649	LOC653418	XM_929497.1	XM_929497.1		653418	88943830	XM_929497.1	LOC653418	XP_934590.1	ILMN_1689510	0006270424	S	280	CACCTTCTCCAGGTGGTTTTGAGTAAGCATCTTAAAATACCAATCTGGTC	1	+	230165404-230165453		PREDICTED: Homo sapiens similar to disrupted in schizophrenia 1 (LOC653418), mRNA.					
Homo sapiens	RefSeq	NM_004738.3	ILMN_165136	VAPB	NM_004738.3	NM_004738.3		9217	40806212	NM_004738.3	VAPB	NP_004729.1	ILMN_1678459	0000990202	S	3482	GGGCCTTTTGACTGAGTGGCAGAAGGAAACTGCTCAGGAAGAGAAACAGG	20	+	56455176-56455225	20q13.32a	Homo sapiens VAMP (vesicle-associated membrane protein)-associated protein B and C (VAPB), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15372378] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16891305] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 16227268] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 16227268] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Interactions, directly with the host cell macromolecular machinery, to allow virus replication [goid 19048] [pmid 16227268] [evidence IDA]; The series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) or other ER-related stress; results in changes in the regulation of transcription and translation [goid 30968] [pmid 16891305] [evidence IMP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of viral genome replication [goid 45070] [pmid 16227268] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 17540579] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 17540579] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 9920726] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16227268] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 16227268] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9920726] [evidence IPI]; Interacting selectively with the microtubule constituent protein beta-tubulin [goid 48487] [pmid 17540579] [evidence IDA]	VAMP-B; ALS8; VAP-B; VAP-C; VAMP-C	VAMP-B; ALS8; VAP-B; VAP-C; VAMP-C
Homo sapiens	RefSeq	NR_003498.1	ILMN_308867	HBII-52-45	NR_003498.1	NR_003498.1		100036566	134152702	NR_003498.1	HBII-52-45		ILMN_3310085	0005870753	S	2	ATATTGTCTTCGACAGGGAAGATGACATAAAAATTATGTTCAATAGGATT	15	+	23060768-23060817	15q11.2e	Homo sapiens HBII-52-45 snoRNA (HBII-52-45), small nucleolar RNA.					
Homo sapiens	RefSeq	NM_020860.1	ILMN_163269	STIM2	NM_020860.1	NM_020860.1		57620	21070998	NM_020860.1	STIM2	NP_065911.2	ILMN_1738449	0003840386	S	4813	GAGTGGAGGAGGCTGGCCAAAGAGACTGTGGGCTGTTTTCAGTCAGGGAG	4	+	26635758-26635807	4p15.2b	Homo sapiens stromal interaction molecule 2 (STIM2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 16860747] [evidence NAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of calcium ions via a store-operated calcium channel [goid 32235] [pmid 16860747] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11463338] [evidence IPI]	KIAA1482; FLJ39527	KIAA1482
Homo sapiens	RefSeq	XM_001718608.1	ILMN_335858	LOC100128648	XM_001718608.1	XM_001718608.1		100128648	169169740	XM_001718608.1	LOC100128648	XP_001718660.1	ILMN_3254040	0007330202	M	932	CAGATGACGTTCTTGCCGATGCCTGCGGCGCAGACGAAATAATTCCAGCC				6p24.1a-p23b	PREDICTED: Homo sapiens hypothetical protein LOC100128648 (LOC100128648), mRNA.					
Homo sapiens	RefSeq	NM_182829.1	ILMN_180603	HSD17B7P2	NR_003086.1	NR_003086.1		158160	104294875	NR_003086.1	HSD17B7P2		ILMN_1760506	0007610142	A	675	TGCCACTGACCTTTTGAGTGTGGCTTTGAACAGGAACTTTCAACCAGCAG	10	+	38654508-38654557	10p11.21a	Homo sapiens hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2 (HSD17B7P2), non-coding RNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	Hsd17b_2; HSD17B7; MGC88684; bA291L22.1; FLJ40773	Hsd17b_2; HSD17B7; MGC88684; FLJ40773
Homo sapiens	RefSeq	NM_017812.1	ILMN_23539	CHCHD3	NM_017812.2	NM_017812.2		54927	142365297	NM_017812.2	CHCHD3	NP_060282.1	ILMN_1673026	0006620626	S	1215	TGGAGTGGGGCGAGGAGAGAGCCAGAAAACATAGATCCGAGGGCAGCAGT	7	-	132469953-132470002	7q32.3d-q33a	Homo sapiens coiled-coil-helix-coiled-coil-helix domain containing 3 (CHCHD3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	FLJ20420	FLJ20420
Homo sapiens	RefSeq	NM_213620.1	ILMN_21812	ATP6V1H	NM_213620.1	NM_213620.1		51606	47717101	NM_213620.1	ATP6V1H	NP_998785.1	ILMN_1689473	0005390546	I	63	CTCCTGTTCTTCGGCCCCCGGTTGCCAGATTGCTTTTCTTCCAGGCCTCA	8	-	54917988-54918037	8q11.23c-q11.23d	Homo sapiens ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H (ATP6V1H), transcript variant 3, mRNA.	The V1 domain of a proton-transporting V-type ATPase found in the vacuolar membrane [goid 221] [pmid 9442887] [evidence NAS]; Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH [goid 300] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 2014052] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16103193] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2014052] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16103193] [evidence EXP]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 12032142] [evidence IDA]; Any process that reduces the pH of the vacuole, measured by the concentration of the hydrogen ion [goid 7035] [pmid 9442887] [evidence NAS]; The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis [goid 15991] [pmid 9442887] [evidence NAS]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any viral process that modulates the frequency, rate, or extent of the antiviral response of the host cell or organism [goid 50690] [pmid 16103193] [evidence EXP]	Functions to increase the rate of ATP hydrolysis [goid 1671] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11179428] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9620685] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12032142] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 9442887] [evidence NAS]; Modulates the activity of an enzyme [goid 30234] [pmid 9442887] [evidence NAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]	SFDbeta; CGI-11; VMA13; SFDalpha; SFD; MSTP042	SFDbeta; CGI-11; VMA13; SFDalpha; SFD; MSTP042
Homo sapiens	RefSeq	XM_001716137.1	ILMN_339818	LOC652330	XM_001716137.1	XM_001716137.1		652330	169209205	XM_001716137.1	LOC652330	XP_001716189.1	ILMN_3205030	0002320364	A	557	TGGTCAGGTATGTTCGTGTGCTTGGGAATATGGTCCATGCAATTCAAATA					PREDICTED: Homo sapiens similar to neurofibromin 1 (neurofibromatosis, von Recklinghausen disease, Watson disease) (LOC652330), mRNA.					
Homo sapiens	RefSeq	XM_001716137.1	ILMN_339818	LOC652330	XM_001716137.1	XM_001716137.1		652330	169209205	XM_001716137.1	LOC652330	XP_001716189.1	ILMN_3231654	0005820707	I	685	GGAATAAGATTGTAGAATACCTGACAGTCTGGGTTATGGGAACATCAAAC					PREDICTED: Homo sapiens similar to neurofibromin 1 (neurofibromatosis, von Recklinghausen disease, Watson disease) (LOC652330), mRNA.					
Homo sapiens	RefSeq	NM_001005501.1	ILMN_165316	OR4K2	NM_001005501.1	NM_001005501.1		390431	53828713	NM_001005501.1	OR4K2	NP_001005501.1	ILMN_2126461	0007560020	S	540	CCTTCCTGTGGTGTTCCAGTTGGCTTGTGTGGATACTTATGTTCTGGGCC	14	+	19414806-19414855	14q11.2a	Homo sapiens olfactory receptor, family 4, subfamily K, member 2 (OR4K2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR14-15	OR14-15
Homo sapiens	RefSeq	NM_001005501.1	ILMN_165316	OR4K2	NM_001005501.1	NM_001005501.1		390431	53828713	NM_001005501.1	OR4K2	NP_001005501.1	ILMN_1690004	0001980142	S	410	GTCCCCAGGTGTGTGTTGCTCTCGTGGTGGCTTCCTGGATTATGGGAGTT	14	+	19414676-19414725	14q11.2a	Homo sapiens olfactory receptor, family 4, subfamily K, member 2 (OR4K2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR14-15	OR14-15
Homo sapiens	RefSeq	NM_130799.1	ILMN_5184	MEN1	NM_130799.1	NM_130799.1		4221	18860846	NM_130799.1	MEN1	NP_570711.1	ILMN_2340877	0006770204	A	2231	AGAAACCCAAGCTCCTCCTCGGAACCGCTCACCTAGAGCCAGACCAACGT	11	-	64328044-64328093	11q13.1b	Homo sapiens multiple endocrine neoplasia I (MEN1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [pmid 12874027] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 12874027] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9465067] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15199122] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14508515] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11500056] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14508515] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 12874027] [evidence IDA]; In animal cells, the first sign of cleavage, or cytokinesis, is the appearance of a shallow groove in the cell surface near the old metaphase plate. A contractile ring containing actin and myosin, is located just inside the plasma membrane at the location of the furrow. Ring contraction is associated with centripetal growth of the membrane that deepens the cleavage furrow and divides the cytoplasm of the two daughter cells. While the term 'cleavage furrow' was initially associated with animal cells, such a structure occurs in many other types of cells, including unicellular protists [goid 32154] [pmid 14508515] [evidence IDA]; A multimeric complex that is able to catalyze the addition of methyl groups to histone proteins [goid 35097] [pmid 14992727] [evidence IPI]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 15199122] [evidence IDA]	The modification of histones by addition of methyl groups [goid 16571] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9989505] [evidence IDA]; Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 12226747] [evidence IDA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [pmid 12226747] [evidence IDA]; The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone [goid 2076] [pmid 15563473] [evidence IGI]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 12874027] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 15331604] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [pmid 16690369] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [pmid 12874027] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 12226747] [evidence IDA]; The modification of histones by addition of methyl groups [goid 16571] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [pmid 11274402] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 12226747] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 11526476] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoblast differentiation [goid 45668] [pmid 15563473] [evidence IGI]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [pmid 15640349] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade [goid 46329] [pmid 12226747] [evidence IDA]; Any process that stops or reduces the activity of the enzyme telomerase, which catalyzes of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1) [goid 51974] [pmid 12837246] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA containing four-way junctions, also known as Holliday junctions, a structure where two DNA double strands are held together by reciprocal exchange of two of the four strands, one strand each from the two original helices [goid 400] [pmid 15331604] [evidence IDA]; Interacting selectively with segment of DNA shaped like a Y. This shape occurs when DNA contains a region of paired double-stranded DNA on one end and a region of unpaired DNA strands on the opposite end [goid 403] [pmid 15331604] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 15331604] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [pmid 14992727] [evidence IDA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 11274402] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11526476] [evidence IPI]	MEAI; SCG2	MEAI; SCG2
Homo sapiens	Unigene	Hs.580229	ILMN_132410	HS.580229	Hs.580229		Hs.580229		10853071	AV735490			ILMN_1842286	0004830605	S	116	GACTCCATGAAAGTGCATTATCACGAAGCTGAATTTGTGTAAGCATTGTG					AV735490 CB Homo sapiens cDNA clone CBFBDD05 5, mRNA sequence					
Homo sapiens	RefSeq	NM_022091.3	ILMN_5802	ASCC3	NM_022091.3	NM_022091.3		10973	76880492	NM_022091.3	ASCC3	NP_071374.1	ILMN_1797656	0004890376	I	3124	GAGGAAGGAGGTAGTGACTAGGAGTGAATATGAGGGAGGTTTCTGGGGAG	6	-	101411196-101411245	6q16.3b	Homo sapiens activating signal cointegrator 1 complex subunit 3 (ASCC3), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]	RNAH; ASC1p200; dJ121G13.4; HELIC1; DJ467N11.1; MGC26074	RNAH; ASC1p200; dJ121G13.4; HELIC1; DJ467N11.1; MGC26074
Homo sapiens	RefSeq	XM_941251.1	ILMN_45574	LOC651965	XM_941251.1	XM_941251.1		651965	89034618	XM_941251.1	LOC651965	XP_946344.1	ILMN_1784154	0002100471	S	226	GATGCCTCTACAACCTTTGTGAAAAAGTCCAGAAAACCTTCCAAACAGTG					PREDICTED: Homo sapiens similar to amyloid beta precursor protein-binding protein 1 isoform a (LOC651965), mRNA.					
Homo sapiens	RefSeq	XM_001726689.1	ILMN_337678	LOC100131391	XM_001726689.1	XM_001726689.1		100131391	169211937	XM_001726689.1	LOC100131391	XP_001726741.1	ILMN_3278879	0002000333	M	665	ACTAATGCTTTCCTCCCCGGCTGCACTGGCCCTTATCTGGGGGTCAGGAA					PREDICTED: Homo sapiens hypothetical LOC100131391 (LOC100131391), mRNA.					
Homo sapiens	RefSeq	NR_002326.1	ILMN_19397	SNORA64	NR_002326.1	NR_002326.1		26784	68510027	NR_002326.1	SNORA64		ILMN_1709604	0007560731	S	82	GACCTCGGATGGGCCTTACTGTGGCCTCTCTTTCCTTGAGGGGTGCAACA	16	-	2012976-2013025	16p13.3e	Homo sapiens small nucleolar RNA, H/ACA box 64 (SNORA64), small nucleolar RNA.				U64; RNU64	U64; RNU64
Homo sapiens	RefSeq	XM_926241.1	ILMN_37428	LOC642843	XM_926241.2	XM_926241.2		642843	113427035	XM_926241.2	LOC642843	XP_931334.2	ILMN_1654663	0002070678	S	542	TGAAAGAAGGTGGGAGGCGATCTGTGGGACTGCGGGGAATTTACAAGCCC	17	-	68759023-68759072	17q25.1a	PREDICTED: Homo sapiens similar to Cleavage and polyadenylation specificity factor, 30 kDa subunit (CPSF 30 kDa subunit) (NS1 effector domain-binding protein 1) (Neb-1) (No arches homolog) (LOC642843), mRNA.					
Homo sapiens	RefSeq	NM_173822.1	ILMN_27329	FAM126B	NM_173822.1	NM_173822.1		285172	28376657	NM_173822.1	FAM126B	NP_776183.1	ILMN_2076484	0001570703	S	3657	TGGAAAATTAGAACCTGAACTAGTATCTACAACATTGCCAAAGTCCAGGG	2	-	201552312-201552361	2q33.1e	Homo sapiens family with sequence similarity 126, member B (FAM126B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]			MGC39518	MGC39518
Homo sapiens	RefSeq	NM_003268.3	ILMN_18399	TLR5	NM_003268.4	NM_003268.4		7100	124248535	NM_003268.4	TLR5	NP_003259.2	ILMN_1722981	0000830440	S	2963	TGCCCAGGGCAGGTGCTTATCTGACCTTAACAGTGCTCTCATCATGGTGG	1	-	223284002-223284051	1q41e	Homo sapiens toll-like receptor 5 (TLR5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	MGC126430; SLEB1; MGC126431; FLJ10052; TIL3	MGC126430; MGC126431; FLJ10052; TIL3
Homo sapiens	RefSeq	NM_173163.1	ILMN_25668	NFATC3	NM_173163.1	NM_173163.1		4775	27886554	NM_173163.1	NFATC3	NP_775186.1	ILMN_1685810	0003140386	I	3342	CTTGCTTCAGTTGAGACCTACGTTTTGGCCAGTCCCAGCAGGAAGATATC	16	+	66812625-66812674	16q22.1c	Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 (NFATC3), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 7749981] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 7739550] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration) [goid 45333] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NFAT4; NFATX	NFAT4; NFATX
Homo sapiens	Unigene	Hs.566484	ILMN_118802	HS.566484	Hs.566484		Hs.566484		5934030	AW058391			ILMN_1869761	0006590411	S	78	TCCCAGGGGATAAAGACTTAAGGCAAGGGTTTAGTCCAAGAGTTGTACAG					wx20a11.x1 NCI_CGAP_Gas4 Homo sapiens cDNA clone IMAGE:2544188 3 similar to contains L1.t1 L1 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_000263.3	ILMN_162236	NAGLU	NM_000263.3	NM_000263.3		4669	66346697	NM_000263.3	NAGLU	NP_000254.2	ILMN_1694980	0000540519	S	2578	TCGCCACCACTGGGCCTTGTTTTCCGCTAATTCCAGGGCAGATTCCAGGG	17	+	37949788-37949837	17q21.31a	Homo sapiens N-acetylglucosaminidase, alpha- (NAGLU), mRNA.	A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 8650226] [evidence TAS]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8650226] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving glycosaminoglycans, any one of a group of polysaccharides that contain amino sugars. Formerly known as mucopolysaccharides, they include hyaluronic acid and chondroitin, which provide lubrication in joints and form part of the matrix of cartilage. The three-dimensional structure of these molecules enables them to trap water, which forms a gel and gives glycosaminoglycans their elastic properties [goid 30203] [evidence IEA]	Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-alpha-D-glucosaminides [goid 4561] [pmid 8650226] [evidence TAS]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]	MPS IIIB; NAG; MPS3B; UFHSD	MPS IIIB; NAG; MPS3B; UFHSD
Homo sapiens	RefSeq	XM_001715191.1	ILMN_338725	LOC100131225	XM_001715191.1	XM_001715191.1		100131225	169171689	XM_001715191.1	LOC100131225	XP_001715243.1	ILMN_3203724	0006900735	A	248	GCCTCCTCCGGGCCCGCGCCCCACCGCGGCGGCGACCAGGGCAACATTCC				7q22.1c	PREDICTED: Homo sapiens hypothetical protein LOC100131225 (LOC100131225), mRNA.					
Homo sapiens	RefSeq	NM_004874.2	ILMN_30119	BAG4	NM_004874.2	NM_004874.2		9530	14574569	NM_004874.2	BAG4	NP_004865.1	ILMN_1727996	0004230632	S	1567	GGGGGCCAGGACTCTGTACGGCAGGCCAGAAAAGAGGCTGTTTGTAAGAT	8	+	38067922-38067971	8p12a	Homo sapiens BCL2-associated athanogene 4 (BAG4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9873016] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9915703] [evidence TAS]	 [goid 5057] [pmid 9915703] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SODD; BAG-4	SODD; BAG-4
Homo sapiens	RefSeq	NM_004874.2	ILMN_30119	BAG4	NM_004874.2	NM_004874.2		9530	14574569	NM_004874.2	BAG4	NP_004865.1	ILMN_2221014	0002850646	S	1926	CTACAAGCTGCTTCTTACCAGCAGGAGGGAAACACACTTCACACAACAGG	8	+	38068281-38068330	8p12a	Homo sapiens BCL2-associated athanogene 4 (BAG4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9873016] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9915703] [evidence TAS]	 [goid 5057] [pmid 9915703] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SODD; BAG-4	SODD; BAG-4
Homo sapiens	RefSeq	XM_001720878.1	ILMN_346931	LOC100129786	XM_001720878.1	XM_001720878.1		100129786	169167300	XM_001720878.1	LOC100129786	XP_001720930.1	ILMN_3266783	0001050066	M	175	AGAGCACGCGAGAGTCCCGGAAACCAACCCACACAGAGCATGCGAGAGCC				4p16.2c	PREDICTED: Homo sapiens similar to hCG2040453 (LOC100129786), mRNA.					
Homo sapiens	RefSeq	XM_001719288.1	ILMN_341249	LOC728792	XM_001719288.1	XM_001719288.1		728792	169210052	XM_001719288.1	LOC728792	XP_001719340.1	ILMN_3240671	0007380019	S	233	CTGGAGTCAGCCAGGCCAAGATTTGGGGCAAAAATGACTTATCAGCTGGC	16	+	52921903-52921933:52922310-52922328	16q12.2b	PREDICTED: Homo sapiens hypothetical LOC728792 (LOC728792), mRNA.					
Homo sapiens	RefSeq	XM_933160.1	ILMN_36489	LOC644019	XM_933160.1	XM_933160.1		644019	89029510	XM_933160.1	LOC644019	XP_938253.1	ILMN_1719949	0000460739	I	1578	TATTCTCTCAAATTCCTTGAGGCGTGAGCCACCGCGCCCAGCCTGTCCTC	9	-	68520221-68520250:68523813-68523832	9q12i	PREDICTED: Homo sapiens similar to COBW domain containing 3, transcript variant 17 (LOC644019), mRNA.					
Homo sapiens	RefSeq	NM_201277.1	ILMN_9368	CNN2	NM_201277.1	NM_201277.1		1265	41327729	NM_201277.1	CNN2	NP_958434.1	ILMN_1770290	0005550037	A	2203	CTTATACTGCTCCATCTTCCCCGGCCACATGCCCCGCCAAGTACTGCACA	19	+	989926-989975	19p13.3i	Homo sapiens calponin 2 (CNN2), transcript variant 2, mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 8889829] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 8889829] [evidence TAS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 8889829] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8889829] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]		
Homo sapiens	RefSeq	XM_936921.1	ILMN_170382	LOC647859	XM_001127102.1	XM_001127102.1		647859	113416953	XM_001127102.1	LOC647859	XP_001127102.1	ILMN_1697504	0000270131	S	143	CCTCGCGTGAGTGCACCTGCGTGCAGATGTCTGCTGGTGTTTATTATGGC				5q13.2b	PREDICTED: Homo sapiens similar to Occludin (LOC647859), mRNA.					
Homo sapiens	RefSeq	XM_942939.1	ILMN_34248	LOC647499	XM_942939.1	XM_942939.1		647499	89028499	XM_942939.1	LOC647499	XP_948032.1	ILMN_1709707	0001940209	I	589	AGGCCCTTTGCCTTCACAGAGAAGAGCAGACACTGCCATGGACCCGTCTC					PREDICTED: Homo sapiens similar to CG7889-PA, transcript variant 2 (LOC647499), mRNA.					
Homo sapiens	RefSeq	NM_014767.1	ILMN_25950	SPOCK2	NM_014767.1	NM_014767.1		9806	7662035	NM_014767.1	SPOCK2	NP_055582.1	ILMN_1656287	0003840554	S	5177	GCCTCCACTTGGGGACCCTGCCTCGTGTCGTCTTTATCTGCCTATTACTC	10	-	73488877-73488926	10q22.1e	Homo sapiens sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 (SPOCK2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 10386950] [evidence NAS]	The biosynthesis of a synapse [goid 7416] [pmid 10386950] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [pmid 10386950] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 10386950] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10386950] [evidence IDA]	testican-2	testican-2
Homo sapiens	RefSeq	NM_022172.1	ILMN_29512	PC	NM_022172.1	NM_022172.1		5091	11761614	NM_022172.1	PC	NP_071504.1	ILMN_1734568	0003990088	I	75	CTTGGGTGTTACAGGAACAGTGTGGCCTCTCTGGAACTCTGCAGACCACC	11	-	66431874-66431923	11q13.1e-q13.1f	Homo sapiens pyruvate carboxylase (PC), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16729965] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 12437512] [evidence EXP]	The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 8610] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate [goid 4736] [pmid 12437512] [evidence EXP]; Catalysis of the reaction: ATP + pyruvate + HCO3- = ADP + phosphate + oxaloacetate [goid 4736] [pmid 7918683] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8048912] [evidence TAS]; Interacting selectively with biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions [goid 9374] [pmid 8048912] [evidence TAS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PCB	PCB
Homo sapiens	RefSeq	NM_052946.2	ILMN_10508	NOSTRIN	NM_052946.2	NM_052946.2		115677	34147474	NM_052946.2	NOSTRIN	NP_443178.1	ILMN_1670099	0007210113	S	1275	GCTCAGCAGCAGACTTTGCAAGGCCTTGTATTCTTTTCAAGCCAGGCAAG	2	+	169426732-169426781	2q24.3f	Homo sapiens nitric oxide synthase trafficker (NOSTRIN), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16807357] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16722822] [evidence EXP]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12446846] [evidence IPI]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]	DaIP2; MGC20702	DaIP2; MGC20702
Homo sapiens	RefSeq	NM_052909.2	ILMN_28138	PLEKHG4B	NM_052909.3	NM_052909.3		153478	148529024	NM_052909.3	PLEKHG4B	NP_443141.3	ILMN_1702020	0007320347	S	11344	GTTGGGCCACACAGAGCCCGAGTAGGTAAAGGAAGGTTCTGGAAACCACT	5	+	189916-189965	5p15.33e	Homo sapiens pleckstrin homology domain containing, family G (with RhoGef domain) member 4B (PLEKHG4B), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	KIAA1909; FLJ43173	FLJ43173
Homo sapiens	RefSeq	NM_001016.3	ILMN_13487	RPS12	NM_001016.3	NM_001016.3		6206	71164877	NM_001016.3	RPS12	NP_001007.2	ILMN_1782621	0006960181	S	154	TGCCCTCATCCACGATGGCCTAGCACGTGGAATTCGCGAAGCTGCCAAAG	6	+	133136168-133136217	6q23.2b	Homo sapiens ribosomal protein S12 (RPS12), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 1861993] [evidence NAS]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 8706699] [evidence IDA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]		
Homo sapiens	RefSeq	NM_005425.4	ILMN_1465	TNP2	NM_005425.4	NM_005425.4		7142	42741657	NM_005425.4	TNP2	NP_005416.1	ILMN_1795250	0001190349	S	454	ACTAATGAGACCGCACTCCTTGGCTTGTTCCTGCGTGTTTCACCCAAAGG	16	-	11361807-11361852:11361853-11361856	16p13.13c	Homo sapiens transition protein 2 (during histone to protamine replacement) (TNP2), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process by which the sperm binds to the zona pellucida glycoprotein layer of the egg. The process begins with the attachment of the sperm plasma membrane to the zona pellucida and includes attachment of the acrosome inner membrane to the zona pellucida after the acrosomal reaction takes place [goid 7339] [evidence IEA]; The discharge, by sperm, of a single, anterior secretory granule following their attachment to the zona pellucida surrounding the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the disperasl of the acrosomal contents into the egg [goid 7340] [evidence IEA]; The infiltration by sperm of the zona pellucida to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm [goid 7341] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process involved in the controlled movement of a sperm cell [goid 30317] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC116785; MGC116783	MGC116785; MGC116783
Homo sapiens	RefSeq	NM_080920.2	ILMN_24028	GGTLC1	NM_080920.2	NM_080920.2		92086	30581158	NM_080920.2	GGTLC1	NP_563577.1	ILMN_1651236	0004760411	I	118	GGTCCTGGGGAGCCACGGAAGGTTGTGGGTGCCAGAGGGTTGTGGTCAGA	20	-	23915345-23915394	20p11.21b	Homo sapiens gamma-glutamyltransferase light chain 1 (GGTLC1), transcript variant C, mRNA.			Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]	MGC50550; dJ831C21.2	MGC50550; dJ831C21.2
Homo sapiens	RefSeq	NM_183062.2	ILMN_6826	PRSS38	NM_183062.2	NM_183062.2		339501	38176298	NM_183062.2	PRSS38	NP_898885.1	ILMN_1786524	0006100632	S	978	GTGAGGTCAGGATACCCACTCTAGGATTCTCATGGCTGCACACCCTGCCC	1	+	226100529-226100532:226100533-226100578	1q42.13b	Homo sapiens protease, serine, 38 (PRSS38), mRNA.				MGC163272	MGC163272
Homo sapiens	RefSeq	XR_040823.1	ILMN_348403	C15ORF34	XR_040823.1	XR_040823.1		80072	169208105	XR_040823.1	C15orf34		ILMN_3268535	0005890181	M	567	GCTGGGGCTTTGGGTGCAAGATGGAGAGTGCTCAGAGATAATGACAGGGG	15	+	70456133-70456182	15q24.1a	PREDICTED: Homo sapiens misc_RNA (C15orf34), miscRNA.					
Homo sapiens	RefSeq	NM_182790.1	ILMN_170702	NAMPT	NM_005746.2	NM_005746.2		10135	111161293	NM_005746.2	NAMPT	NP_005737.1	ILMN_1753111	0003060523	A	312	AATCCTGCGGCAGAAGCCGAGTTCAACATCCTCCTGGCCACCGACTCCTA	7	-	105925277-105925326	7q22.2c	Homo sapiens nicotinamide phosphoribosyltransferase (NAMPT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8289818] [evidence EXP]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8289818] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8289818] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8289818] [evidence TAS]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 8289818] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: pyrophosphate + nicotinamide nucleotide = PRPP + niacinamide [goid 47280] [evidence IEA]; Catalysis of the reaction: pyrophosphate + nicotinamide nucleotide = PRPP + niacinamide [goid 47280] [pmid 8289818] [evidence EXP]	DKFZP666B131; PBEF; 1110035O14Rik; NAMPT; MGC117256	PBEF; MGC117256
Homo sapiens	RefSeq	NM_005746.1	ILMN_170702	NAMPT	NM_005746.2	NM_005746.2		10135	111161293	NM_005746.2	NAMPT	NP_005737.1	ILMN_1653871	0002230379	I	1544	CGTCTTCAAGGACCCAGTTGCTGATCCCAACAAAAGGTCCAAAAAGGGCC	7	-	105893542-105893591	7q22.2c	Homo sapiens nicotinamide phosphoribosyltransferase (NAMPT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8289818] [evidence EXP]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8289818] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8289818] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8289818] [evidence TAS]; The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH [goid 9435] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 8289818] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: pyrophosphate + nicotinamide nucleotide = PRPP + niacinamide [goid 47280] [evidence IEA]; Catalysis of the reaction: pyrophosphate + nicotinamide nucleotide = PRPP + niacinamide [goid 47280] [pmid 8289818] [evidence EXP]	DKFZP666B131; PBEF; 1110035O14Rik; NAMPT; MGC117256	PBEF; MGC117256
Homo sapiens	RefSeq	NM_058179.2	ILMN_27293	PSAT1	NM_058179.2	NM_058179.2		29968	34304344	NM_058179.2	PSAT1	NP_478059.1	ILMN_1712563	0005720450	I	984	CGCATTGGCAATGCCAAAGGAGATGATGCTTTAGAAAAAAGATTTCTTGA	9	+	80132833-80132882	9q21.2c	Homo sapiens phosphoserine aminotransferase 1 (PSAT1), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the formation of L-serine, the levorotatory isomer of 2-amino-3-hydroxypropanoic acid [goid 6564] [pmid 10637769] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, one of the vitamin B6 compounds [goid 8615] [pmid 10637769] [evidence NAS]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]	Catalysis of the reaction: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate [goid 4648] [pmid 10637769] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MGC1460; EPIP; PSAT; PSA	MGC1460; PSA; EPIP; PSAT
Homo sapiens	RefSeq	NM_002789.3	ILMN_22525	PSMA4	NM_002789.3	NM_002789.3		5685	23110940	NM_002789.3	PSMA4	NP_002780.1	ILMN_1682098	0004040711	S	577	CTATCAGAGTGACCCTAGTGGAAATTACGGGGGATGGAAGGCCACATGCA	15	+	76625095-76625144	15q25.1a	Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 4 (PSMA4), mRNA.	A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15225636] [evidence IPI]	MGC12467; MGC24813; MGC111191; HC9; HsT17706	MGC12467; MGC24813; MGC111191; HC9; HsT17706
Homo sapiens	RefSeq	NM_002789.3	ILMN_22525	PSMA4	NM_002789.3	NM_002789.3		5685	23110940	NM_002789.3	PSMA4	NP_002780.1	ILMN_2198376	0003420543	S	947	GGGGCACCATTTCAGTGTAAAAGCAGTCCTACTCTTCCACACTAGGAAGG	15	+	76628366-76628415	15q25.1a	Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 4 (PSMA4), mRNA.	A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15225636] [evidence IPI]	MGC12467; MGC24813; MGC111191; HC9; HsT17706	MGC12467; MGC24813; MGC111191; HC9; HsT17706
Homo sapiens	RefSeq	XM_928372.1	ILMN_34167	LOC645335	XM_928372.1	XM_928372.1		645335	88976678	XM_928372.1	LOC645335	XP_933465.1	ILMN_1803201	0000130017	S	121	ATTTACCAGAAAGGAGGTTGGTGGAAGTTCTCAGATGGGAGGCTCGCCAT	4	-	115732549-115732598		PREDICTED: Homo sapiens hypothetical protein LOC645335 (LOC645335), mRNA.					
Homo sapiens	RefSeq	XM_001714502.1	ILMN_344113	LOC100133911	XM_001714502.1	XM_001714502.1		100133911	169203200	XM_001714502.1	LOC100133911	XP_001714554.1	ILMN_3242888	0006060609	S	1128	CCCCAAGGAGGAAGATCACAGAGCTAAAGTGCCGTGCGAAGCTGACTGCC					PREDICTED: Homo sapiens similar to glutamate receptor, ionotropic, kainate 4 (LOC100133911), mRNA.					
Homo sapiens	RefSeq	NR_030312.1	ILMN_388033	MIR548A1	NR_030312.1	NR_030312.1		693125	262205900	NR_030312.1	MIR548A1		ILMN_3310683	0005220021	S	27	AGTAATTGTGATTTTTGCCATTAAAAGTAACGACAAAACTGGCAATTACT				6p22.3d	Homo sapiens microRNA 548a-1 (MIR548A1), microRNA.					
Homo sapiens	RefSeq	NM_014673.2	ILMN_16778	TTC35	NM_014673.3	NM_014673.3		9694	142377730	NM_014673.3	TTC35	NP_055488.1	ILMN_1777366	0002230402	S	1083	AATGCCTTTTACTGCTAAGTGGGGAGATGGGGGAAATCCATGGAAGAGAG	8	+	109498981-109499030	8q23.1d	Homo sapiens tetratricopeptide repeat domain 35 (TTC35), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 10942595] [evidence IDA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0103	KIAA0103
Homo sapiens	Unigene	Hs.574667	ILMN_126848	HS.574667	Hs.574667		Hs.574667		18988269	BM678373			ILMN_1859524	0007330161	S	379	GTCTTAATAGACCTTTCACCGTCTGGATGTTGCTGATCTTAACACTGTGG	2	+	130824762-130824811		UI-E-EJ0-aho-m-08-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-aho-m-08-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_175736.3	ILMN_4212	FMNL3	NM_175736.4	NM_175736.4		91010	119120873	NM_175736.4	FMNL3	NP_783863.4	ILMN_1692678	0002940615	I	698	AGGGTCTGGAAAGTGGTGACGATGGTGCATTTGACAAACTCCGGTCCTGG	12	-	50052316-50052365	12q13.12c	Homo sapiens formin-like 3 (FMNL3), transcript variant 1, mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	WBP3; DKFZp762B245; FLJ45265; FHOD3; MGC45819	WBP3; DKFZp762B245; FHOD3; MGC45819
Homo sapiens	RefSeq	NM_005134.2	ILMN_6519	PPP4R1	NM_005134.2	NM_005134.2		9989	108936951	NM_005134.2	PPP4R1	NP_005125.1	ILMN_2345512	0005560020	A	3417	CAGCCCTGTGTGTGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGG	18	-	9560237-9560286	18p11.22b	Homo sapiens protein phosphatase 4, regulatory subunit 1 (PPP4R1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10026142] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10026142] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 4 [goid 30362] [pmid 10026142] [evidence NAS]	PP4R1; PP4(Rmeg)	PP4R1
Homo sapiens	RefSeq	NM_005134.1	ILMN_6519	PPP4R1	NM_005134.2	NM_005134.2		9989	108936951	NM_005134.2	PPP4R1	NP_005125.1	ILMN_1724544	0002060286	S	3656	TGATCAGCTCTGAGGTGCAACTTCTTCACATACTGTACATACCTGTGACC	18	-	9559446-9559495	18p11.22b	Homo sapiens protein phosphatase 4, regulatory subunit 1 (PPP4R1), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10026142] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10026142] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 4 [goid 30362] [pmid 10026142] [evidence NAS]	PP4R1; PP4(Rmeg)	PP4R1
Homo sapiens	RefSeq	NM_001002906.1	ILMN_1869	XKRY2	NM_001002906.1	NM_001002906.1		353515	51093877	NM_001002906.1	XKRY2	NP_001002906.1	ILMN_3246624	0000780537	S	241	GTAATTTCCTACTTTACACTCTAACTTTATATAAAAAAGAAACTACCTTT	Y	+	18756963-18757012	Yq11.221f	Homo sapiens XK, Kell blood group complex subunit-related, Y-linked 2 (XKRY2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			XKRYP7	XKRYP7
Homo sapiens	RefSeq	NM_002104.2	ILMN_10868	GZMK	NM_002104.2	NM_002104.2		3003	73747815	NM_002104.2	GZMK	NP_002095.1	ILMN_1710734	0001260482	S	689	GGGCCCCTTGATCTGTAAAGGTGTCTTCCACGCTATAGTCTCTGGAGGTC	5	+	54329604-54329653	5q11.2d	Homo sapiens granzyme K (granzyme 3; tryptase II) (GZMK), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	TRYP2	TRYP2
Homo sapiens	RefSeq	NM_001007232.1	ILMN_6860	CARD17	NM_001007232.1	NM_001007232.1		440068	55925611	NM_001007232.1	CARD17	NP_001007233.1	ILMN_3238525	0005560270	S	366	GAGCAGCCAGATGATAAAGCACAGATGCCCAGCACTGAAAGAGTTACTTC	11	-	104963246-104963295	11q22.3b	Homo sapiens caspase recruitment domain family, member 17 (CARD17), mRNA.					
Homo sapiens	RefSeq	NM_001007232.1	ILMN_6860	CARD17	NM_001007232.1	NM_001007232.1		440068	55925611	NM_001007232.1	CARD17	NP_001007233.1	ILMN_1707979	0003930368	S	275	GCTGGGACTCTCAGCAGGTCCAACATCTGGAAATCACCTTACTACACAAG	11	-	104970115-104970148:104971240-104971255	11q22.3b	Homo sapiens caspase recruitment domain family, member 17 (CARD17), mRNA.					
Homo sapiens	RefSeq	NR_030284.1	ILMN_387994	MIR557	NR_030284.1	NR_030284.1		693142	262205768	NR_030284.1	MIR557		ILMN_3309269	0006130343	S	45	TGCTGCTGGAGAAGTGTTTGCACGGGTGGGCCTTGTCTTTGAAAGGAGGT				1q24.2a	Homo sapiens microRNA 557 (MIR557), microRNA.					
Homo sapiens	RefSeq	NM_201548.3	ILMN_11551	CERKL	NM_201548.3	NM_201548.3		375298	65301113	NM_201548.3	CERKL	NP_963842.1	ILMN_1801091	0004070524	I	1894	GGGGAGGAACTCAGTAATGCTCCATTGCTCTAACCTCCTGCTGTGTGGCC	2	-	182110829-182110878	2q31.3b	Homo sapiens ceramide kinase-like (CERKL), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]	RP26	RP26
Homo sapiens	RefSeq	NM_199425.1	ILMN_7096	VSX1	NM_199425.1	NM_199425.1		30813	40806215	NM_199425.1	VSX1	NP_955457.1	ILMN_1680015	0001030086	I	724	CAGTGAGCCAATCAGCAGTCCCTTCTCTATAGCCAACACGCTCCCTTTGC	20	-	25059353-25059371:25059372-25059402	20p11.21a	Homo sapiens visual system homeobox 1 (VSX1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10673340] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10673340] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	PPD; RINX; KTCN; PPCD	RINX; PPD; KTCN; PPCD
Homo sapiens	RefSeq	XM_929661.1	ILMN_45228	LOC643697	XM_929661.1	XM_929661.1		643697	89057888	XM_929661.1	LOC643697	XP_934754.1	ILMN_1653347	0003520482	S	1	ATGGAGCTCCTACCCCACTGGGACCTGCTGACTGAATTCTTTCTGAGACC	20	+	46752998-46753047		PREDICTED: Homo sapiens hypothetical protein LOC643697 (LOC643697), mRNA.					
Homo sapiens	RefSeq	XM_932269.1	ILMN_38903	DKFZP686J0529	XM_932269.1	XM_932269.1		388468	89044098	XM_932269.1	DKFZp686J0529	XP_937362.1	ILMN_1764070	0003830576	I	1858	GGCAGACTGGATTTGGCCTGTGGCCTATAGCTTGCTGGGATTGAGGGAAG	18	-	14517957-14518006	18p11.21b	PREDICTED: Homo sapiens hypothetical protein DKFZp686J0529, transcript variant 6 (DKFZp686J0529), mRNA.					
Homo sapiens	RefSeq	NM_021233.2	ILMN_183807	DNASE2B	NM_021233.2	NM_021233.2		58511	17402880	NM_021233.2	DNASE2B	NP_067056.2	ILMN_1760361	0006520392	I	219	GTACCTGTACCTAGACTCTACAACTAGAAGCTGGAGGAAGAGTGAGCAAC	1	+	84640232-84640281	1p31.1a	Homo sapiens deoxyribonuclease II beta (DNASE2B), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]	The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides [goid 6259] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks [goid 4520] [evidence IEA]; Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products [goid 4531] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DLAD	DLAD
Homo sapiens	RefSeq	XM_001716507.1	ILMN_341701	LOC100133655	XM_001716507.1	XM_001716507.1		100133655	169179421	XM_001716507.1	LOC100133655	XP_001716559.1	ILMN_3240993	0002190497	S	1336	TACAAGCCCAATAAAGGGTTAAAGGGGCCGACCAGGAGGTCCCTGGGCCT					PREDICTED: Homo sapiens hypothetical LOC100133655 (LOC100133655), mRNA.					
Homo sapiens	RefSeq	NM_054105.1	ILMN_4149	OR6C2	NM_054105.1	NM_054105.1		341416	50080218	NM_054105.1	OR6C2	NP_473446.1	ILMN_1800182	0003840431	S	481	GGCCTCCAGCTCGAATTCTGTGACTCCAATGCCATTGATCATTTTAGCTG	12	+	54132745-54132794	12q13.2b	Homo sapiens olfactory receptor, family 6, subfamily C, member 2 (OR6C2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10706615] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 10706615] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 10706615] [evidence NAS]	OR6C67	OR6C67
Homo sapiens	RefSeq	NM_015360.2	ILMN_8825	SKIV2L2	NM_015360.3	NM_015360.3		23517	141802656	NM_015360.3	SKIV2L2	NP_056175.2	ILMN_1651513	0001450463	S	3193	GAAGGCAGCATAATTCGTTGTATGAGGCGCCTGGAAGAATTGCTTCGACA	5	+	54747713-54747717:54754463-54754507	5q11.2d-q11.2e	Homo sapiens superkiller viralicidic activity 2-like 2 (S. cerevisiae) (SKIV2L2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]	MGC142069; Dob1; KIAA0052; Mtr4	MGC142069; Dob1; KIAA0052; Mtr4
Homo sapiens	RefSeq	NM_033437.2	ILMN_4227	PDE5A	NM_033437.2	NM_033437.2		8654	61744431	NM_033437.2	PDE5A	NP_246273.2	ILMN_2282729	0000290497	I	2	AGGGACGAGTCCACGGGACAGCCCAAAGGCAACATGACGGAACCTTGCCA	4	-	120768599-120768648	4q27a	Homo sapiens phosphodiesterase 5A, cGMP-specific (PDE5A), transcript variant 3, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence NAS]; The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9187] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of cyclic GMP, guanosine 3',5'-phosphate [goid 46069] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyclic GMP, guanosine 3',5'-phosphate [goid 46069] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]; Catalysis of the reaction: guanosine 3',5'-cyclic phosphate + H2O = guanosine 5'-phosphate [goid 47555] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate [goid 4114] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]	CGB-PDE; PDE5; PDE5A1; CN5A	CGB-PDE; PDE5; PDE5A1; CN5A
Homo sapiens	RefSeq	NM_181598.3	ILMN_366374	ATL1	NM_181598.3	NM_181598.3		51062	189181740	NM_181598.3	ATL1	NP_853629.2	ILMN_3181411	0002680475	A	1725	GGTACTCTGGAGAATACCGAGAGCTGGGAGCTGTAATAGACCAGGTGGCT	14	+	51095113-51095162	14q22.1b	Homo sapiens atlastin GTPase 1 (ATL1), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	NM_019892.3	ILMN_11866	INPP5E	NM_019892.3	NM_019892.3		56623	47078290	NM_019892.3	INPP5E	NP_063945.2	ILMN_1811301	0003370255	S	3085	CCGTTTGCTTCTTTAACTCCAGCCGCGGAATGACATTAGTGGAACCGGGC	9	-	139323312-139323361	9q34.3d	Homo sapiens inositol polyphosphate-5-phosphatase, 72 kDa (INPP5E), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IEA]; Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [pmid 10764818] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 4-phosphate + phosphate [goid 4439] [evidence IEA]	MGC117201; PPI5PIV	MGC117201; PPI5PIV
Homo sapiens	RefSeq	XM_001713732.1	ILMN_348596	LOC100133835	XM_001713732.1	XM_001713732.1		100133835	169167321	XM_001713732.1	LOC100133835	XP_001713784.1	ILMN_3214945	0002690491	A	248	GATGATTCTGACATTTGGGATGATACAGCACTGATAAAAGCATATGATAA	5	-	69444659-69444708		PREDICTED: Homo sapiens hypothetical protein LOC100133835, transcript variant 2 (LOC100133835), mRNA.					
Homo sapiens	RefSeq	NM_006724.2	ILMN_6743	MAP3K4	NM_005922.2	NM_005922.2		4216	55956903	NM_005922.2	MAP3K4	NP_005913.2	ILMN_1678087	0007320731	A	5191	GTGCCATTACTACTGTACACGGACCATCGCCTCTGTCTCCTCCGTGTCTC	6	+	161455419-161455468	6q26a	Homo sapiens mitogen-activated protein kinase kinase kinase 4 (MAP3K4), transcript variant 1, mRNA.		The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [pmid 9305639] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9305639] [evidence TAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 9305639] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [pmid 9305639] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	FLJ42439; PRO0412; MAPKKK4; MEKK4; MTK1; KIAA0213	FLJ42439; PRO0412; MAPKKK4; MEKK4; MTK1; KIAA0213
Homo sapiens	RefSeq	NM_005922.2	ILMN_6743	MAP3K4	NM_005922.2	NM_005922.2		4216	55956903	NM_005922.2	MAP3K4	NP_005913.2	ILMN_1800171	0006110068	I	3751	TCGGCCCAGCCCCTCTGGTGGTGACTCTGTGCTGCCCAAATCCATCAGCA	6	+	161434045-161434078:161434795-161434810	6q26a	Homo sapiens mitogen-activated protein kinase kinase kinase 4 (MAP3K4), transcript variant 1, mRNA.		The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [pmid 9305639] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 9305639] [evidence TAS]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [pmid 9305639] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [pmid 9305639] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]	FLJ42439; PRO0412; MAPKKK4; MEKK4; MTK1; KIAA0213	FLJ42439; PRO0412; MAPKKK4; MEKK4; MTK1; KIAA0213
Homo sapiens	RefSeq	NM_172366.2	ILMN_166662	FBXO16	NM_172366.2	NM_172366.2		157574	30089920	NM_172366.2	FBXO16	NP_758954.1	ILMN_1715823	0002690167	S	970	GTCCCTAAGTGCCAGCTCTCCCCTAAAAGTTCCAGCTCATCTCGCCTGGC	8	-	28347706-28347755	8p21.1c	Homo sapiens F-box protein 16 (FBXO16), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		MGC125924; MGC125925; MGC125923; FBX16	MGC125924; MGC125925; MGC125923; FBX16
Homo sapiens	Unigene	Hs.575742	ILMN_127923	HS.575742	Hs.575742		Hs.575742		12346033	BF978818			ILMN_1849068	0005860082	S	321	GGAAGATGCCTAGTGACATTGCGGAGGGATGACCTGCTCCCAACCAAGGA	X	+	13891570-13891619		602149164F2 NIH_MGC_62 Homo sapiens cDNA clone IMAGE:4308326 5, mRNA sequence					
Homo sapiens	RefSeq	XM_945954.1	ILMN_309116	ZNF527	NM_032453.1	NM_032453.1		84503	149192840	NM_032453.1	ZNF527	NP_115829.1	ILMN_1707816	0001710465	A	160	AGAGATGTGGCGCTAGACTTTTCCCAAGAAGAGTGGGAATGGCTGAAGCC	19	+	37870037-37870086	19q13.12c	Homo sapiens zinc finger protein 527 (ZNF527), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	KIAA1829	
Homo sapiens	Unigene	Hs.543712	ILMN_107259	HS.543712	Hs.543712		Hs.543712		8366420	BE049365			ILMN_1902494	0001300451	S	137	CCAGTGTGCTGAGGTTGAGAAACCCTGACTTAGGATGACTCTCATTGCAG	4	-	13787519-13787568		xw85a01.x1 NCI_CGAP_Pan1 Homo sapiens cDNA clone IMAGE:2834760 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004548.1	ILMN_6518	NDUFB10	NM_004548.1	NM_004548.1		4716	4758773	NM_004548.1	NDUFB10	NP_004539.1	ILMN_1811754	0001820482	S	561	CAGAGGCAGAGGATGCTGCAAGAGAGAAAAGCTGCAAAAGAGGCCGCCGC	16	+	1951843-1951892	16p13.3e	Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa (NDUFB10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14557246] [evidence IPI]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	PDSW	PDSW
Homo sapiens	RefSeq	NM_006244.2	ILMN_7752	PPP2R5B	NM_006244.2	NM_006244.2		5526	30795206	NM_006244.2	PPP2R5B	NP_006235.1	ILMN_2124082	0003290386	S	2467	GGGGTCCATGGTCTATTTATTCTCGCCCAGCTCACCCTCTACACAGACAC	11	+	64458280-64458329	11q13.1c	Homo sapiens protein phosphatase 2, regulatory subunit B', beta isoform (PPP2R5B), mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8703017] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15380617] [evidence IPI]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 8703017] [evidence TAS]	FLJ35411; B56B; PR61B	FLJ35411; B56B; PR61B
Homo sapiens	RefSeq	XM_929328.2	ILMN_30869	TCEB3CL2	XM_929328.2	XM_929328.2		653420	113427748	XM_929328.2	TCEB3CL2	XP_934421.1	ILMN_3237433	0002940736	S	945	AAATCGCCTCCTGTCCAGGAAAGCCAGTCAGAGAGGCTGCAGGCGGCCGT	18	-	42797611-42797660	18q21.1b	PREDICTED: Homo sapiens transcription elongation factor B polypeptide 3C-like 2 (TCEB3CL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	NM_006949.1	ILMN_23497	STXBP2	NM_006949.1	NM_006949.1		6813	5902127	NM_006949.1	STXBP2	NP_008880.1	ILMN_2159453	0006960026	S	1615	GGCCCCCGGCTCATCGTGTATGTCATGGGCGGTGTGGCCATGTCAGAGAT	19	+	7618291-7618340	19p13.2e	Homo sapiens syntaxin binding protein 2 (STXBP2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence NAS]; The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with the SNAP receptor syntaxin-2 [goid 30347] [evidence NAS]; Interacting selectively with the SNAP receptor syntaxin-3 [goid 30348] [evidence NAS]	pp10122; UNC18B; MUNC18-2; UNC18-2; Hunc18b	pp10122; UNC18B; MUNC18-2; UNC18-2; Hunc18b
Homo sapiens	RefSeq	NM_198995.1	ILMN_26292	C18ORF34	NM_198995.1	NM_198995.1		374864	39752676	NM_198995.1	C18orf34	NP_945346.1	ILMN_1673320	0005860102	S	3009	CGGTGTTGACAGTGACTGTTCGCTTCCCCAGATTTCCCTATCGTCTTGGC	18	-	28771615-28771664	18q12.1e-q12.1f	Homo sapiens chromosome 18 open reading frame 34 (C18orf34), mRNA.				MGC163407; MGC111498; FLJ44050	MGC163407; MGC111498; FLJ44050
Homo sapiens	RefSeq	NM_003626.2	ILMN_173490	PPFIA1	NM_003626.2	NM_003626.2		8500	29171751	NM_003626.2	PPFIA1	NP_003617.1	ILMN_1800164	0000130608	I	4973	GACCATGGCGTGGTATTTATTGTGCAGCAGATCCAGAGACAGAGGCAGCC	11	+	69907910-69907959	11q13.3c	Homo sapiens protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 (PPFIA1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7796809] [evidence TAS]	The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 7796809] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7796809] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 7796809] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12923177] [evidence IPI]	MGC26800; FLJ41337; LIPRIN; LIP1; FLJ42630; FLJ43474; LIP.1	MGC26800; FLJ41337; LIPRIN; LIP1; FLJ42630; FLJ43474; LIP.1
Homo sapiens	RefSeq	XM_941984.1	ILMN_40410	LOC652513	XM_941984.1	XM_941984.1		652513	89071616	XM_941984.1	LOC652513	XP_947077.1	ILMN_1707151	0002340639	S	43	GATCAAAGGAGAATGGGGCAGAGGGATGGTATAAAGGACATCGTCCAGTG					PREDICTED: Homo sapiens similar to Baculoviral IAP repeat-containing protein 1 (Neuronal apoptosis inhibitory protein) (LOC652513), mRNA.					
Homo sapiens	RefSeq	XM_936752.1	ILMN_37184	MGC35030	XM_936752.1	XM_936752.1		339531	88952927	XM_936752.1	MGC35030	XP_941845.1	ILMN_1670545	0004780630	A	899	CTGGATCAGTGCCAGAGCCATTCCCCGGGCAGAGAAGCATCTAGACCTTG					PREDICTED: Homo sapiens hypothetical protein MGC35030 (MGC35030), mRNA.					
Homo sapiens	RefSeq	NM_016118.3	ILMN_23529	NUB1	NM_016118.3	NM_016118.3		51667	32483375	NM_016118.3	NUB1	NP_057202.2	ILMN_1665291	0006200672	S	2901	GTGGATTGAGTGCCAGGTGCATCCAAGACTTTCCCTCCCTTCCAGAAGGC	7	+	150706262-150706311	7q36.1d	Homo sapiens negative regulator of ubiquitin-like proteins 1 (NUB1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NUB1L; NYREN18; BS4	NUB1L; NYREN18; BS4
Homo sapiens	RefSeq	NM_016118.3	ILMN_23529	NUB1	NM_016118.3	NM_016118.3		51667	32483375	NM_016118.3	NUB1	NP_057202.2	ILMN_2150661	0001050184	S	2115	CGTCCCTAACCCCTTCCCCAGCTTGGTGTTTTACCCCGAAACAGGAAGGA	7	+	150705476-150705525	7q36.1d	Homo sapiens negative regulator of ubiquitin-like proteins 1 (NUB1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NUB1L; NYREN18; BS4	NUB1L; NYREN18; BS4
Homo sapiens	RefSeq	XM_936779.1	ILMN_40928	LOC647719	XM_936779.1	XM_936779.1		647719	88952425	XM_936779.1	LOC647719	XP_941872.1	ILMN_1725963	0000460605	S	650	TTGGCTTCACGTCTGGTTAACTTTAGGAGAGCACACAACACCAAGCACAG					PREDICTED: Homo sapiens similar to H2B histone family, member F (LOC647719), mRNA.					
Homo sapiens	Unigene	Hs.541541	ILMN_105778	HS.541541	Hs.541541		Hs.541541		500072	D19756			ILMN_1869343	0004060408	S	106	ATGGCAGAAACATTAAAATGAACACTATGGGGAAAGGGGAAGAGAGGCAG	13	+	76363175-76363224		HUMGS00712 Human promyelocyte Homo sapiens cDNA clone mm0970 3, mRNA sequence					
Homo sapiens	RefSeq	XR_037199.1	ILMN_338267	LOC100132838	XR_037199.1	XR_037199.1		100132838	169170122	XR_037199.1	LOC100132838		ILMN_3238331	0000010014	S	61	TCGCGGAGGCCCTCCGGAGGCCAAGCTCATGCATCACGGCGGCCACCAGG	7	-	62869280-62869329	7q11.21b	PREDICTED: Homo sapiens misc_RNA (LOC100132838), miscRNA.					
Homo sapiens	RefSeq	XM_496769.2	ILMN_40558	LOC441098	XM_496769.2	XM_496769.2		441098	88984825	XM_496769.2	LOC441098	XP_496769.2	ILMN_1766345	0001690471	S	4728	CCGGCATGCGAAGAATGTTTTGTGTTCGAAATTGTTTGAGGGTTGGCATG	5	+	99756332-99756373:99761297-99761304	5q21.1b	PREDICTED: Homo sapiens similar to nuclear pore membrane protein 121 (LOC441098), mRNA.					
Homo sapiens	RefSeq	NM_153253.28	ILMN_17494	SIPA1	NM_153253.28	NM_153253.28		6494	24497628	NM_153253.28	SIPA1	NP_694985.28	ILMN_2415536	0002140768	A	3236	CTTGGAGTCCATGCTCAGGAAGCTGCAGGAGGACCTGCAGAAGGAGAAGG	11	+	65174484-65174526:65174616-65174622	11q13.1d	Homo sapiens signal-induced proliferation-associated gene 1 (SIPA1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9183624] [evidence IC ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 12059963] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 10373454] [evidence NAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9346962] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9346962] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 9183624] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 7799964] [evidence NAS]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 9346962] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rap family [goid 46582] [pmid 9346962] [evidence NAS]	MGC102688; SPA1; MGC17037	MGC102688; SPA1; MGC17037
Homo sapiens	RefSeq	NM_012343.3	ILMN_183201	NNT	NM_012343.3	NM_012343.3		23530	122939154	NM_012343.3	NNT	NP_036475.3	ILMN_2254994	0001400296	I	28	AAGTTCTGATTTTTCCTAGCGAGCTGGAGGAAAGGCAGGTACCCGGAGTG	5	+	43602818-43602867	5p12b	Homo sapiens nicotinamide nucleotide transhydrogenase (NNT), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [pmid 10673423] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [pmid 10673423] [evidence TAS]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 10673423] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 10673423] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to both NAD+ and NADP+ [goid 3957] [pmid 9524818] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 10673423] [evidence IDA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [pmid 10673423] [evidence TAS]	MGC126502; MGC126503	MGC126502; MGC126503
Homo sapiens	RefSeq	NM_182977.1	ILMN_183201	NNT	NM_012343.3	NM_012343.3		23530	122939154	NM_012343.3	NNT	NP_036475.3	ILMN_1806634	0002060450	A	3970	GAAACTTTTATGAACTTCTGAGCTGTCCCCTTGCAATTCAACCGCAGTTT	5	+	43664108-43664157	5p12b	Homo sapiens nicotinamide nucleotide transhydrogenase (NNT), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [pmid 10673423] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [pmid 10673423] [evidence TAS]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 10673423] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 10673423] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to both NAD+ and NADP+ [goid 3957] [pmid 9524818] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 10673423] [evidence IDA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [pmid 10673423] [evidence TAS]	MGC126502; MGC126503	
Homo sapiens	RefSeq	NM_012343.3	ILMN_183201	NNT	NM_012343.3	NM_012343.3		23530	122939154	NM_012343.3	NNT	NP_036475.3	ILMN_2336647	0006020575	A	4330	GTTCATCATGTTGGCAAGTGATGTGGCAATTATCTCTGGTGACAAAAGAG	5	+	43677888-43677908:43680051-43680079	5p12b	Homo sapiens nicotinamide nucleotide transhydrogenase (NNT), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [pmid 10673423] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [pmid 10673423] [evidence TAS]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 10673423] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 10673423] [evidence TAS]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to both NAD+ and NADP+ [goid 3957] [pmid 9524818] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: NADPH + H+ + NAD+ = NADP+ + NADH + H+. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD+ and B-specific (i.e. the pro-S hydrogen is transferred) with respect to NADP+ [goid 8750] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [pmid 10673423] [evidence IDA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [pmid 10673423] [evidence TAS]	MGC126502; MGC126503	MGC126502; MGC126503
Homo sapiens	RefSeq	NM_005895.2	ILMN_38661	GOLGA3	NM_005895.3	NM_005895.3		2802	87196329	NM_005895.3	GOLGA3	NP_005886.2	ILMN_1733511	0006250093	S	8975	GGTCCAGGTGAATCTCGTCATAAGTGATCTCAGGCTCTCACAGGATCCGG	12	-	133345722-133345771	12q24.33d	Homo sapiens golgi autoantigen, golgin subfamily a, 3 (GOLGA3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9295333] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 8315394] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A complex of proteins that, in vitro, stimulates intra-Golgi transport; a 13S complex, about 800 kDa in size and consists of at least five polypeptides. In yeast, this complex is called the Sec34/35 complex and is composed of eight subunits (Sec34p, Sec35p, Dor1p, Cod1p, Cod2p, Cod3p, Cod4p, and Cod5p) [goid 17119] [pmid 8315394] [evidence IDA]	The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 8315394] [evidence NAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8315394] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17711851] [evidence IPI]	GCP170; MEA-2	GCP170; MEA-2
Homo sapiens	RefSeq	NM_145738.1	ILMN_19133	SYNGR1	NM_145738.1	NM_145738.1		9145	22035699	NM_145738.1	SYNGR1	NP_663791.1	ILMN_1668313	0001230504	I	55	ATTCGATCCTTCATGGATAGGCAGCTGGACACAGAGGTCGTGGGTGAGCT	22	+	38090175-38090224	22q13.1d	Homo sapiens synaptogyrin 1 (SYNGR1), transcript variant 1c, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9760194] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC:1939	MGC:1939
Homo sapiens	RefSeq	NM_004990.2	ILMN_3087	MARS	NM_004990.2	NM_004990.2		4141	14043021	NM_004990.2	MARS	NP_004981.2	ILMN_1799819	0002690707	S	2471	CTTTGGAGGGGGCCAGGCAAAAACGTCCCCGAAGCCAGCAGTTGTAGAGA	12	+	56196026-56196041:56196295-56196328	12q13.3b	Homo sapiens methionyl-tRNA synthetase (MARS), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6431] [evidence IEA]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met) [goid 4825] [pmid 8921912] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ35667; METRS; MTRNS	FLJ35667; METRS; MTRNS
Homo sapiens	RefSeq	XR_037876.1	ILMN_347626	LOC646493	XR_037876.1	XR_037876.1		646493	169165748	XR_037876.1	LOC646493		ILMN_3245712	0002100204	S	523	CCTGCTAAGGTTGCCTGGAAAAAACGTGGAAGAGGAAGACAAAGATGACG				3q22.1e	PREDICTED: Homo sapiens misc_RNA (LOC646493), miscRNA.					
Homo sapiens	RefSeq	NM_015274.1	ILMN_14776	MAN2B2	NM_015274.1	NM_015274.1		23324	50659092	NM_015274.1	MAN2B2	NP_056089.1	ILMN_1768510	0004810438	S	4044	CAGGTACTGGAGGAAGAGAGAAGAGGCATGACAGCTAACAGGGACGGGCT	4	+	6623990-6624039	4p16.1f	Homo sapiens mannosidase, alpha, class 2B, member 2 (MAN2B2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving mannose, the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins [goid 6013] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the hydrolysis of terminal, non-reducing alpha-D-mannose residues in alpha-D-mannosides [goid 4559] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with any carbohydrate [goid 30246] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0935	KIAA0935
Homo sapiens	RefSeq	NM_015439.2	ILMN_442	CCDC28A	NM_015439.2	NM_015439.2		25901	31083115	NM_015439.2	CCDC28A	NP_056254.1	ILMN_1798659	0002000504	S	1323	TCCAGTGTTGATCGCAAGCTGTTGATGCACAGGCGTCTTGTGGCAAGCCC	6	+	139114283-139114332	6q24.1a	Homo sapiens coiled-coil domain containing 28A (CCDC28A), mRNA.				C6orf80; CCRL1AP; MGC131913; DKFZp586D0623	C6orf80; CCRL1AP; MGC131913; DKFZp586D0623
Homo sapiens	RefSeq	XM_935490.1	ILMN_33658	LOC641721	XM_935490.1	XM_935490.1		641721	89026971	XM_935490.1	LOC641721	XP_940583.1	ILMN_1672112	0006020537	S	183	AGTACAGTTAATCAGAAGAATTATCTTGACTAGAACTTTCCAAATTTGTC					PREDICTED: Homo sapiens similar to septin 7 (LOC641721), mRNA.					
Homo sapiens	RefSeq	NR_003044.3	ILMN_165838	SNORD50B	NR_003044.3	NR_003044.3		692088	157057556	NR_003044.3	SNORD50B		ILMN_3247444	0000460246	S	20	TCCCGAAGCTGATAACCTGAAGAAAAATAAGTACGGATTCGGCTTCTGAG	6	-	86444027-86444076	6q14.3c	Homo sapiens small nucleolar RNA, C/D box 50B (SNORD50B), small nucleolar RNA.				U50'; U50B	U50'; U50B
Homo sapiens	RefSeq	XM_927774.1	ILMN_38812	LOC644669	XM_927774.1	XM_927774.1		644669	89029580	XM_927774.1	LOC644669	XP_932867.1	ILMN_1687123	0000450201	S	61	AAGAGGACTGCTCTACACTGGGCCTGTGCCAATGGCCACGCAGAAGTAGT	9	-	69186711-69186756:69190834-69190837	18p11.21a	PREDICTED: Homo sapiens similar to RIKEN cDNA 4930532L20 (LOC644669), mRNA.					
Homo sapiens	RefSeq	NM_001040694.1	ILMN_168809	INCENP	NM_001040694.1	NM_001040694.1		3619	102467234	NM_001040694.1	INCENP	NP_001035784.1	ILMN_2355738	0001110538	A	3182	GGGCCCAGCCCCACATGGCCTGCAGACAGTGCTCTGTAAATAGTTGTTTT	11	+	61676247-61676296	11q12.3a	Homo sapiens inner centromere protein antigens 135/155kDa (INCENP), transcript variant 1, mRNA.	A structural unit of the synaptonemal complex found between the lateral elements [goid 801] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A region of heterochromatin located near the centromere of a chromosome [goid 5721] [pmid 9864353] [evidence IDA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 9864353] [evidence IDA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 16239925] [evidence IDA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 16239925] [evidence IMP]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 16239925] [evidence IMP]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9864353] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16239925] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14610074] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16239925] [evidence IPI]	FLJ31633; MGC111393	FLJ31633; MGC111393
Homo sapiens	RefSeq	NM_022083.1	ILMN_8647	FAM129A	NM_052966.2	NM_052966.2		116496	93277091	NM_052966.2	FAM129A	NP_443198.1	ILMN_1810725	0004230735	A	3568	GGAAGGTGTGATCTGTGGGACTGTCTGGGCCTGTTACTCATCCTGCTATC	1	-	184763474-184763523	1q25.3f	Homo sapiens family with sequence similarity 129, member A (FAM129A), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	NIBAN; FLJ38228; C1orf24	NIBAN
Homo sapiens	Unigene	Hs.584731	ILMN_136912	HS.584731	Hs.584731		Hs.584731		2115260	AA431552			ILMN_1881333	0007210279	S	1	TTCGGCACGATGGACAGGAAGAAAGTGGTGGAGTCAGAGGTCACAATCCA	Y	-	10265029-10265078		zw78d11.r1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:782325 5 similar to contains element TAR1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NR_003032.1	ILMN_182719	SNORA32	NR_003032.1	NR_003032.1		692063	94536605	NR_003032.1	SNORA32		ILMN_2085525	0005890477	S	5	CATTACCAAGGCTTTTAGAATGCAGTTTCTCATTTGCTGTGGACATGACC	11	-	93464211-93464260	11q21a	Homo sapiens small nucleolar RNA, H/ACA box 32 (SNORA32), small nucleolar RNA.				ACA32	ACA32
Homo sapiens	RefSeq	NM_002405.2	ILMN_25964	MFNG	NM_002405.2	NM_002405.2		4242	21536460	NM_002405.2	MFNG	NP_002396.2	ILMN_1764577	0002000438	S	1887	CCCATCTTCCTGCTATAAATGTGGGTGTGATGGCTGGATCTGGGGCAGCC	22	-	37865200-37865249	22q13.1a	Homo sapiens MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (MFNG), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9187150] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [pmid 9207795] [evidence TAS]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: transfers a beta-D-GlcNAc residue from UDP-D-GlcNAc to the fucose residue of a fucosylated protein acceptor [goid 33829] [evidence IEA]		
Homo sapiens	RefSeq	NM_004446.2	ILMN_11672	EPRS	NM_004446.2	NM_004446.2		2058	62241041	NM_004446.2	EPRS	NP_004437.2	ILMN_1783695	0005090088	S	4781	ACTACACCTTATTTGGTCGCAGCTACTGAGGGATGAACGAAAGCCCCCTC	1	-	220142126-220142147:220142148-220142175	1q41d	Homo sapiens glutamyl-prolyl-tRNA synthetase (EPRS), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8188258] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8188258] [evidence TAS]	The process of coupling glutamate to glutamyl-tRNA, catalyzed by glutamyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'- adenosine residue of the tRNA [goid 6424] [evidence IEA]; The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6433] [evidence IEA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 8188258] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu) [goid 4818] [evidence IEA]; Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro) [goid 4827] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	QPRS; EARS; PARS; PIG32; QARS; DKFZp313B047	QPRS; EARS; PARS; PIG32; QARS; DKFZp313B047
Homo sapiens	Unigene	Hs.559234	ILMN_113598	HS.559234	Hs.559234		Hs.559234		6140162	AW136029			ILMN_1886487	0007560132	S	244	TCCCCTCCCACAGCTTGCTGCAGAGGAACCCAGCCACTTGGAAGCCATGT					UI-H-BI1-adn-f-06-0-UI.s1 NCI_CGAP_Sub3 Homo sapiens cDNA clone IMAGE:2717339 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001946.2	ILMN_5440	DUSP6	NM_001946.2	NM_001946.2		1848	42764682	NM_001946.2	DUSP6	NP_001937.2	ILMN_1677466	0006250468	I	1025	CTGACCTTGACCGAGACCCCAATAGTGCAACAGACTCGGATGGTAGTCCG	12	-	89744608-89744657	12q21.33a	Homo sapiens dual specificity phosphatase 6 (DUSP6), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8670865] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 17322878] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8670865] [evidence IDA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [pmid 8670865] [evidence IDA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 8670865] [evidence TAS]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8670865] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 8670865] [evidence IDA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [pmid 17322878] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate [goid 17017] [evidence IEA]	MKP3; PYST1	MKP3; PYST1
Homo sapiens	RefSeq	NM_001014795.1	ILMN_15420	ILK	NM_001014795.1	NM_001014795.1		3611	62420874	NM_001014795.1	ILK	NP_001014795.1	ILMN_1732827	0003140519	I	153	GGGACGCAGCTCAGGCCCCCTACCCCCAACACAAACACTTCTCTCCTGTA	11	+	6581935-6581984	11p15.4c	Homo sapiens integrin-linked kinase (ILK), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	Branching of the ureteric bud [goid 1658] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10871859] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence NAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence NAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of the apicobasal polarity of an epithelial cell [goid 45197] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10871859] [evidence IDA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16936772] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18339839] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp686F1765; P59	DKFZp686F1765; P59
Homo sapiens	RefSeq	XR_041999.1	ILMN_342498	ARP11	XR_041999.1	XR_041999.1		653857	169171027	XR_041999.1	ARP11		ILMN_3185198	0003830672	A	229	CAGAGCCGGCGCCTCCTCGGCAGACAGAACCTCCACTCAATACACCAGAA	7	-	149623342-149623369:149651491-149651512	7q36.1c	PREDICTED: Homo sapiens misc_RNA (ARP11), miscRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	NM_078630.1	ILMN_29354	MSL3L1	NM_078629.1	NM_078629.1		10943	17975756	NM_078629.1	MSL3L1	NP_523353.1	ILMN_1713156	0001740433	A	381	TCGCCTGAGGAGCACAGGAAGAAAGAAGAAGCGCTGCAGGTTGCCTGGTG	X	+	11688533-11688538:11688877-11688920	Xp22.2	Homo sapiens male-specific lethal 3-like 1 (Drosophila) (MSL3L1), transcript variant 1, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10395802] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The formation or destruction of chromatin structures [goid 6333] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10395802] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10395802] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The formation or destruction of chromatin structures [goid 6333] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10395802] [evidence TAS]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]	DKFZP586J1822	DKFZP586J1822
Homo sapiens	RefSeq	XM_935133.1	ILMN_37566	DPP6	NM_001039350.1	NM_001039350.1		1804	86792862	NM_001039350.1	DPP6	NP_001034439.1	ILMN_1725379	0000450669	I	316	CCTGGACCAGAAGTCGGGTTCGGACTTGGGGCAAAATGAAGGAAAAGGCC	7	+	153381025-153381074	7q36.2c	Homo sapiens dipeptidyl-peptidase 6 (DPP6), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 8236] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [pmid 8103397] [evidence TAS]	MGC46605; DPPX	
Homo sapiens	RefSeq	XM_372556.3	ILMN_41151	LOC390551	XM_372556.3	XM_372556.3		390551	89038728	XM_372556.3	LOC390551	XP_372556.3	ILMN_1690954	0000020128	S	660	GAAGGAGGACTCCATTGGATAAAGGCCTTATTAATACGGGGATCTGTGAG	15	+	121593-121642		PREDICTED: Homo sapiens similar to hect domain and RLD 2 (LOC390551), mRNA.					
Homo sapiens	RefSeq	NM_057175.3	ILMN_16240	NARG1	NM_057175.3	NM_057175.3		80155	56549647	NM_057175.3	NARG1	NP_476516.1	ILMN_1669142	0003140524	S	5098	GTGTCAGAGGACCTTGACTGGGTTCATTTTATGTCCAGACATCACCCCTG	4	+	140311479-140311528	4q31.1c	Homo sapiens NMDA receptor regulated 1 (NARG1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12145306] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12140756] [evidence IDA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [pmid 12145306] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15496142] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12140756] [evidence IDA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The acetylation of the N-terminal amino acid of proteins [goid 6474] [pmid 15496142] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 12145306] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12145306] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15496142] [evidence IPI]; Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule [goid 8080] [evidence IEA]; Interacting selectively with any part of a ribosome [goid 43022] [pmid 15496142] [evidence IDA]	Ga19; TBDN100; NAT1; NATH	Ga19; NAT1; NATH; TBDN100
Homo sapiens	RefSeq	NM_182971.1	ILMN_21383	COX8C	NM_182971.2	NM_182971.2		341947	112807172	NM_182971.2	COX8C	NP_892016.1	ILMN_1744432	0005270445	S	40	TGTGCTGTCCACGCCTGGCTTTGTCTCACCTGACGCGATATGCCTCTCCT	14	+	92883329-92883367:92883368-92883378	14q32.13a	Homo sapiens cytochrome c oxidase subunit 8C (COX8C), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12762575] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	MGC119774; MGC119775; COX8-3	MGC119774; MGC119775; COX8-3
Homo sapiens	RefSeq	NM_014789.1	ILMN_6184	ZNF623	NM_014789.1	NM_014789.1		9831	7662213	NM_014789.1	ZNF623	NP_055604.1	ILMN_1738046	0000730333	S	5046	CACCACTCCTGGCCAACTGTAGTTGAACTCAGGTATTGGAAGGGCTTCCG	8	+	144808906-144808955	8q24.3g	Homo sapiens zinc finger protein 623 (ZNF623), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC104128; MGC103965	MGC104128; MGC103965
Homo sapiens	RefSeq	XM_497623.1	ILMN_14273	LOC441847	XM_497623.1	XM_497623.1		441847	51474855	XM_497623.1	LOC441847	XP_497623.1	ILMN_1682454	0004610286	S	735	ACATCAGAGAGTTCACACTGGTGAAAGGCTCGAATGTGGGAAAGCCTTCA	19	-	39817560-39817580:39817675-39817703		PREDICTED: Homo sapiens similar to zinc finger protein 239 (predicted) (LOC441847), mRNA.					
Homo sapiens	RefSeq	NM_001768.4	ILMN_2358	CD8A	NM_001768.5	NM_001768.5		925	91807113	NM_001768.5	CD8A	NP_001759.3	ILMN_1760374	0002970408	I	748	CCGGGACTTGTGGGGTCCTTCTCCTGTCACTGGTTATCACCCTTTACTGC	2	-	86869963-86870012	2p11.2e	Homo sapiens CD8a molecule (CD8A), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2496167] [evidence NAS]; The side of the plasma membrane that is opposite to the side that faces the cytoplasm [goid 9897] [evidence IEA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 11131152] [evidence NAS]	Any process involved in the carrying out of an immune response by a T cell [goid 2456] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 11131152] [evidence NAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 9830036] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex [goid 19882] [pmid 2496167] [evidence NAS]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 9830036] [evidence NAS]; The process whereby a relatively unspecialized T cell acquires specialized features of a cytotoxic T cell [goid 45065] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of calcium-mediated signaling [goid 50850] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2470098] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 2493728] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 11131152] [evidence NAS]; Interacting selectively with major histocompatibility complex class I molecules; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation [goid 42288] [pmid 11131152] [evidence NAS]	p32; CD8; MAL; Leu2	p32; CD8; MAL; Leu2
Homo sapiens	RefSeq	XM_001723323.1	ILMN_342111	LOC391359	XM_001723323.1	XM_001723323.1		391359	169163664	XM_001723323.1	LOC391359	XP_001723375.1	ILMN_3284222	0002710202	M	228	CGCCTTCACCTTCATCAGCAGCATGATGTACCTGATAACTGAGGAAGCCG				2p23.3b	PREDICTED: Homo sapiens similar to hCG1784039 (LOC391359), mRNA.					
Homo sapiens	RefSeq	NM_017448.1	ILMN_15784	LDHC	NM_002301.2	NM_002301.2		3948	9257229	NM_002301.2	LDHC	NP_002292.1	ILMN_1745043	0006060470	A	463	CAGCAGGAGGGAGAAACTCGCCTTGCCCTGGTCCAACGTAATGTGGCTAT	11	+	18407912-18407961	11p15.1c	Homo sapiens lactate dehydrogenase C (LDHC), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	 [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [pmid 2440048] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC111073; LDHX; LDH3	MGC111073; LDHX; LDH3
Homo sapiens	RefSeq	NM_002301.2	ILMN_15784	LDHC	NM_002301.2	NM_002301.2		3948	9257229	NM_002301.2	LDHC	NP_002292.1	ILMN_1727748	0001990161	I	107	GTGCTTTGTCCCTGTGGGTCATCTGTACTGATTGCGCCAAGAAAGCATTT	11	+	18390535-18390584	11p15.1c	Homo sapiens lactate dehydrogenase C (LDHC), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	 [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [pmid 2440048] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC111073; LDHX; LDH3	MGC111073; LDHX; LDH3
Homo sapiens	RefSeq	NM_006492.1	ILMN_1612	ALX3	NM_006492.1	NM_006492.1		257	5729727	NM_006492.1	ALX3	NP_006483.1	ILMN_1729325	0006250762	S	1657	GCAGTCATCTTCCCCTCCAAGGGGGCAGAAATTCCACCAGAAATCACCAC	1	-	110404203-110404252	1p13.3b	Homo sapiens aristaless-like homeobox 3 (ALX3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_000687.1	ILMN_10724	AHCY	NM_000687.1	NM_000687.1		191	9951914	NM_000687.1	AHCY	NP_000678.1	ILMN_1657862	0003710537	S	1684	GCCTTCACCTGGTCTGTGGACTTATACCTGTGTGCTTGGTTTACAGGTCC	20	-	32332113-32332162	20q11.22a	Homo sapiens S-adenosylhomocysteine hydrolase (AHCY), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of S-adenosylhomocysteine, forming homocysteine and then methionine [goid 19510] [evidence IEA]	Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O = adenosine + L-homocysteine [goid 4013] [pmid 2596825] [evidence TAS]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IEA]	SAHH	SAHH
Homo sapiens	RefSeq	NM_012319.2	ILMN_170037	SLC39A6	NM_012319.2	NM_012319.2		25800	12751474	NM_012319.2	SLC39A6	NP_036451.2	ILMN_2143566	0003060291	S	2427	AGTTTCAGTAGGTCATAGGGAGATGAGTTTGTATGCTGTACTATGCAGCG	18	-	31943453-31943502	18q12.2a	Homo sapiens solute carrier family 39 (zinc transporter), member 6 (SLC39A6), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	LIV-1	LIV-1
Homo sapiens	RefSeq	NM_001004321.2	ILMN_163390	FLJ45445	NM_001004321.2	NM_001004321.2		399844	116642881	NM_001004321.2	FLJ45445	NP_001004321.2	ILMN_2131022	0005820215	S	603	AAGGTTGGGCCTCCCGGCGACTGCCGCAGGCCCAAGTTGTCCTGAAGTCG				19p13.3j	Homo sapiens FLJ45445 protein (FLJ45445), mRNA.					
Homo sapiens	RefSeq	XM_930698.1	ILMN_163390	FLJ45445	NM_001004321.2	NM_001004321.2		399844	116642881	NM_001004321.2	FLJ45445	NP_001004321.2	ILMN_1702241	0004120014	I	723	GCCTTTGTAGGCCCCGAACTTTCTCCAGCCAAGCTCTGAGGGCCCACCTC				19p13.3j	Homo sapiens FLJ45445 protein (FLJ45445), mRNA.					
Homo sapiens	RefSeq	NR_031580.1	ILMN_388510	MIR761	NR_031580.1	NR_031580.1		100313892	269846976	NR_031580.1	MIR761		ILMN_3310118	0005420044	S	8	AGCAGGGTGAAACTGACACAGTTCTGGTGAGTTTCACTTTGCTGCTCCTC					Homo sapiens microRNA 761 (MIR761), microRNA.					
Homo sapiens	RefSeq	NM_080876.2	ILMN_28367	DUSP19	NM_080876.2	NM_080876.2		142679	31377625	NM_080876.2	DUSP19	NP_543152.1	ILMN_1722492	0005260195	S	4872	CTGAATTAAAAAATCTGTTGGTGGCCGGGCGCAGTGGCTCATGCCTGTGG	2	+	183672674-183672723	2q32.1a	Homo sapiens dual specificity phosphatase 19 (DUSP19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that terminates the activity of the active enzyme MAP kinase [goid 188] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress [goid 7254] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein threonine/tyrosine phosphate + H2O = protein threonine/tyrosine + phosphate [goid 8330] [evidence IEA]; Catalysis of the reaction: JUN kinase serine/threonine/tyrosine phosphate + H2O = JUN kinase serine/threonine/tyrosine + phosphate [goid 8579] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MGC138210; SKRP1; DUSP17; TS-DSP1	MGC138210; SKRP1; DUSP17; TS-DSP1
Homo sapiens	RefSeq	NM_001012762.1	ILMN_28001	CTU2	NM_001012762.1	NM_001012762.1		348180	61676107	NM_001012762.1	CTU2	NP_001012780.1	ILMN_1676406	0007400292	A	1441	AGCTGCCGCGTGAACATGAAGGACTTGGGCCTGGGGCTTGCAGGAGATCC	16	+	87308809-87308835:87309091-87309113	16q24.3a	Homo sapiens cytosolic thiouridylase subunit 2 homolog (S. pombe) (CTU2), transcript variant 2, mRNA.				MGC148064; MGC148063; MGC131681	MGC148064; MGC148063; MGC131681
Homo sapiens	RefSeq	XM_939188.1	ILMN_28001	CTU2	NM_001012762.1	NM_001012762.1		348180	61676107	NM_001012762.1	CTU2	NP_001012780.1	ILMN_1779184	0005490086	A	1261	GCTTTTGGGGCTCAGACCTCCTCGCGTCTCTCCCAGATGCAGTCACCCAT	16	+	87308507-87308556	16q24.3a	Homo sapiens cytosolic thiouridylase subunit 2 homolog (S. pombe) (CTU2), transcript variant 2, mRNA.				MGC148064; MGC148063; MGC131681	
Homo sapiens	RefSeq	XM_497256.2	ILMN_39312	LOC285444	XM_497256.2	XM_497256.2		285444	89031683	XM_497256.2	LOC285444	XP_497256.2	ILMN_1801116	0006450735	S	1124	CTGAGGCCAAGCCCATGGGGATTTGTGTCTACTTGCACCTCCTTGCTCAT	10	-	135321888-135321937		PREDICTED: Homo sapiens similar to CG8443-PA (LOC285444), mRNA.					
Homo sapiens	RefSeq	NR_031594.1	ILMN_388519	MIR1183	NR_031594.1	NR_031594.1		100302122	269847034	NR_031594.1	MIR1183		ILMN_3310855	0003830500	S	27	CATTAGAGAAGACAGGAGTTCACTGTAGGTGATGGTGAGAGTGGGCATGG					Homo sapiens microRNA 1183 (MIR1183), microRNA.					
Homo sapiens	RefSeq	NM_145861.1	ILMN_27264	EDARADD	NM_145861.2	NM_145861.2		128178	153267417	NM_145861.2	EDARADD	NP_665860.2	ILMN_1761820	0003710273	A	2619	GCAACATTTGTAGGGGCCGCTGCTAGTTAGCTACCCTTGCCCACCGCCGT	1	+	234714478-234714527	1q43a	Homo sapiens EDAR-associated death domain (EDARADD), transcript variant A, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 11780064] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	ED3; EDA3	
Homo sapiens	RefSeq	NM_145861.1	ILMN_27264	EDARADD	NM_145861.2	NM_145861.2		128178	153267417	NM_145861.2	EDARADD	NP_665860.2	ILMN_1754592	0003420192	I	31	CTCCAGAGAATTAAGAAGCCAAACTCAACATCGCCATGGGCCTCAGGACG	1	+	234624333-234624367:234624368-234624382	1q43a	Homo sapiens EDAR-associated death domain (EDARADD), transcript variant A, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 11780064] [evidence ISS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; The process whose specific outcome is the progression of the hair follicle over time, from its formation to the mature structure. A hair follicle is a tube-like opening in the epidermis where the hair shaft develops and into which the sebaceous glands open [goid 1942] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]	ED3; EDA3	
Homo sapiens	RefSeq	NM_001031847.1	ILMN_13748	CPT1A	NM_001031847.1	NM_001031847.1		1374	73623027	NM_001031847.1	CPT1A	NP_001027017.1	ILMN_1710052	0004150091	I	2325	GGAAAGTCTCAGCATATGGAAACAAGGCCTTGGAGGAGACCATGGACATC	11	-	68278801-68278850	11q13.2b	Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7892212] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [pmid 7892212] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [pmid 7892212] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CPT1-L; L-CPT1; CPT1	CPT1-L; L-CPT1; CPT1
Homo sapiens	RefSeq	NM_001876.2	ILMN_13748	CPT1A	NM_001031847.1	NM_001031847.1		1374	73623027	NM_001031847.1	CPT1A	NP_001027017.1	ILMN_1696316	0005290358	A	2187	GGTTGCTGATGACGGCTATGGTGTGTCGTACATCCTTGTGGGAGAGAACC	11	-	68283656-68283705	11q13.2b	Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7892212] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [pmid 7892212] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [pmid 7892212] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CPT1-L; L-CPT1; CPT1	CPT1-L; L-CPT1; CPT1
Homo sapiens	RefSeq	XM_926999.1	ILMN_40966	LOC643700	XM_926999.1	XM_926999.1		643700	89056766	XM_926999.1	LOC643700	XP_932092.1	ILMN_1791420	0001070647	S	418	TATCAAACTTACACCCCTTTTGACCCGGCAGCTCCCAAGAATAGCCGTGC	19	-	39740309-39740358		PREDICTED: Homo sapiens hypothetical protein LOC643700 (LOC643700), mRNA.					
Homo sapiens	Unigene	Hs.214235	ILMN_82419	HS.214235	Hs.214235		Hs.214235		32273768	CD722920			ILMN_1854031	0002120056	S	442	GCTCACTCTGGGAATGGTCCTGTTGTAAGAGCCATCACTTAGAACCCACG	4	+	38465990-38466039		oj15g10.y1 Human lacrimal gland, unamplified: oj Homo sapiens cDNA clone oj15g10 5, mRNA sequence					
Homo sapiens	RefSeq	XM_936375.1	ILMN_44549	LOC642223	XM_936375.1	XM_936375.1		642223	89028807	XM_936375.1	LOC642223	XP_941468.1	ILMN_1679169	0006560243	S	203	AAGACGTGGAGCTGGAAGACAGTGACACTGATGATCCTGGCCCTGCATAG					PREDICTED: Homo sapiens hypothetical protein LOC642223 (LOC642223), mRNA.					
Homo sapiens	RefSeq	XM_938759.1	ILMN_41937	LOC649686	XM_938759.1	XM_938759.1		649686	89066019	XM_938759.1	LOC649686	XP_943852.1	ILMN_1747297	0006020553	S	192	CTCCCTGGCCCAGTGCATCAGTGTGCTTGCTCAACAGGTGACCTTACAGG					PREDICTED: Homo sapiens similar to Neuronal acetylcholine receptor protein, beta-4 subunit precursor (LOC649686), mRNA.					
Homo sapiens	RefSeq	NM_018060.3	ILMN_17420	IARS2	NM_018060.3	NM_018060.3		55699	46852146	NM_018060.3	IARS2	NP_060530.3	ILMN_1671207	0002340731	S	3087	GCGGAGTCTTCAGATACACTGTGTCCTCGATGTGCAGAAGTTGTCAGTGG	1	+	218387544-218387593	1q41d	Homo sapiens isoleucyl-tRNA synthetase 2, mitochondrial (IARS2), nuclear gene encoding mitochondrial protein, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA [goid 6428] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + L-isoleucine + tRNA(Ile) = AMP + diphosphate + L-isoleucyl-tRNA(Ile) [goid 4822] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	FLJ10326	FLJ10326
Homo sapiens	RefSeq	NR_030322.1	ILMN_388045	MIR591	NR_030322.1	NR_030322.1		693176	262205952	NR_030322.1	MIR591		ILMN_3309069	0002690736	S	41	GTAGAATGTTGGTTAACTGTGGACTCCCTGGCTCTGTCTCAAATCTACTG				7q21.3c	Homo sapiens microRNA 591 (MIR591), microRNA.					
Homo sapiens	Unigene	Hs.562345	ILMN_115480	HS.562345	Hs.562345		Hs.562345		3753432	AI200826			ILMN_1848879	0000940743	S	14	ttGAGTCTTGCTCTCTCGCCCAGGCTACCAGGCTGGAGTGAAACTCCATc					qf67e09.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1755112 3, mRNA sequence					
Homo sapiens	RefSeq	NR_029779.1	ILMN_388008	MIR200C	NR_029779.1	NR_029779.1		406985	262205800	NR_029779.1	MIR200C		ILMN_3308951	0000460523	S	16	CAGTGTTTGGGTGCGGTTGGGAGTCTCTAATACTGCCGGGTAATGATGGA				12p13.31d	Homo sapiens microRNA 200c (MIR200C), microRNA.					
Homo sapiens	RefSeq	XM_001717344.1	ILMN_335174	LOC100129278	XM_001717344.1	XM_001717344.1		100129278	169163209	XM_001717344.1	LOC100129278	XP_001717396.1	ILMN_3253314	0003870626	M	5746	CCAGAGACCTTACAAACATTGCCTCAGGAGTTCATAATTCCCGGTTCTAG	2	+	21219152-21219201	2p24.1c	PREDICTED: Homo sapiens similar to tudor domain containing 1 (LOC100129278), mRNA.					
Homo sapiens	RefSeq	XM_001717344.1	ILMN_335174	LOC100129278	XM_001717344.1	XM_001717344.1		100129278	169163209	XM_001717344.1	LOC100129278	XP_001717396.1	ILMN_3176853	0007550717	A	6157	GTTGCATCTGGTCTCGCAACTTATTCTAAAGATTCACCTCATCTTGATGC	2	+	21219563-21219612	2p24.1c	PREDICTED: Homo sapiens similar to tudor domain containing 1 (LOC100129278), mRNA.					
Homo sapiens	RefSeq	XM_939730.1	ILMN_35486	LOC390874	XM_939730.1	XM_939730.1		390874	89057070	XM_939730.1	LOC390874	XP_944823.1	ILMN_1787469	0005490026	A	1631	GGAAGCAGCACACCCCCCAGCCCAAGTGCACAAAAAGGGCCCCCCTTCCT				19p13.3h	PREDICTED: Homo sapiens similar to one cut domain, family member 3 (LOC390874), mRNA.					
Homo sapiens	RefSeq	NM_001017969.1	ILMN_10689	KIAA2026	NM_001017969.1	NM_001017969.1		158358	63003918	NM_001017969.1	KIAA2026	NP_001017969.1	ILMN_2106227	0006860612	S	3945	TCCTGCGTCTGTCTTCCCTGCTTTTCAGTCGTCGGGCTTAGAGAAGCCTG	9	-	5909700-5909749	9p24.1c	Homo sapiens KIAA2026 (KIAA2026), mRNA.					
Homo sapiens	RefSeq	NM_199334.2	ILMN_17821	THRA	NM_003250.4	NM_003250.4		7067	40806158	NM_003250.4	THRA	NP_003241.2	ILMN_1661683	0003830138	A	1517	ACCTGCTGGCGTTCGAGCACTACGTCAACCACCGCAAACACAACATTCCG	17	+	35499036-35499085	17q21.1b-q21.1c	Homo sapiens thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) (THRA), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 2879242] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2879242] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [pmid 8806651] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16799563] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10866662] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR1A1; THRA1; THRA2; ERB-T-1; ERBA; ERBA1; c-ERBA-1; AR7; MGC43240; MGC000261; EAR7	NR1A1; THRA1; THRA2; ERB-T-1; ERBA; ERBA1; c-ERBA-1; AR7; MGC43240; MGC000261; EAR7
Homo sapiens	RefSeq	NM_003250.4	ILMN_17821	THRA	NM_003250.4	NM_003250.4		7067	40806158	NM_003250.4	THRA	NP_003241.2	ILMN_1718182	0007380047	I	2215	CCCCAACTCAAGTGTCACCTCCTTCCCCAGCTCCCCCAGGCAGAAATAGT	17	+	35503420-35503469	17q21.1b-q21.1c	Homo sapiens thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) (THRA), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [evidence IEA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 2879242] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2879242] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with thyroid hormone to initiate a change in cell activity [goid 4887] [pmid 8806651] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16799563] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10866662] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NR1A1; THRA1; THRA2; ERB-T-1; ERBA; ERBA1; c-ERBA-1; AR7; MGC43240; MGC000261; EAR7	NR1A1; THRA1; THRA2; ERB-T-1; ERBA; ERBA1; c-ERBA-1; AR7; MGC43240; MGC000261; EAR7
Homo sapiens	RefSeq	XM_935740.1	ILMN_44333	LOC646999	XM_929979.2	XM_929979.2		646999	113418418	XM_929979.2	LOC646999	XP_935072.1	ILMN_1671646	0000060368	S	186	CACCGAAGCAGCCCACGGAGCTCGAGGCGACGCTGCTGAGCCTGGTTCCC	7	+	39615857-39615906	7p14.1d	PREDICTED: Homo sapiens hypothetical LOC646999 (LOC646999), mRNA.					
Homo sapiens	RefSeq	NM_023083.2	ILMN_41807	CAPN10	NM_023083.2	NM_023083.2		11132	89353288	NM_023083.2	CAPN10	NP_075571.1	ILMN_2252186	0006860274	I	1874	CACTGCCGGCCCAGTGACACCGAGTTCCACCCCATCGGCTTCCATATCTT	2	+	241184979-241185028	2q37.3e	Homo sapiens calpain 10 (CAPN10), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope [goid 5623] [pmid 17572128] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [pmid 12974673] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [pmid 15471947] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells [goid 32388] [pmid 12974673] [evidence ISS]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [pmid 17572128] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 15044459] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46326] [pmid 17572128] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISS]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]		
Homo sapiens	RefSeq	NM_023083.2	ILMN_41807	CAPN10	NM_023083.2	NM_023083.2		11132	89353288	NM_023083.2	CAPN10	NP_075571.1	ILMN_2331553	0007210243	A	263	TTCTGCGACTTGTCTACGCCGCTGGCCCAGTTCCGCGAGGACATCACGTG	2	+	241175080-241175129	2q37.3e	Homo sapiens calpain 10 (CAPN10), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope [goid 5623] [pmid 17572128] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Dynamic structural changes to the assembly and arrangement of the actin cytoskeleton, comprising actin filaments and their associated proteins [goid 31532] [pmid 12974673] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the regulated release of insulin [goid 32024] [pmid 15471947] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the directed movement of substances within cells [goid 32388] [pmid 12974673] [evidence ISS]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [pmid 17572128] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [pmid 15044459] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the import of the hexose monosaccharide glucose into a cell or organelle [goid 46326] [pmid 17572128] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Interacting selectively with a SNARE (soluble N-ethylmaleimide-sensitive factor attached protein receptor) protein [goid 149] [evidence ISS]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]; Interacting selectively with any protein component of any cytoskeleton (actin, microtubule, or intermediate filament cytoskeleton) [goid 8092] [evidence ISS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium [goid 4198] [evidence IEA]		
Homo sapiens	RefSeq	NM_020485.3	ILMN_26684	RHCE	NM_020485.3	NM_020485.3		6006	66346663	NM_020485.3	RHCE	NP_065231.2	ILMN_1770591	0006760162	A	1423	CGCTCATGACAGCAAAGTCTCCTTATGTATAATGAAACAAGGTCAGAGAC	1	-	25688885-25688934	1p36.11c	Homo sapiens Rh blood group, CcEe antigens (RHCE), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1438298] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]			RHC; RHPI; Rh4; RHIXB; RhVI; RH30A; CD240CE; RH; MGC103977; RHE; RhIVb(J); RhVIII	RHC; RHPI; Rh4; RHIXB; RhVI; RH30A; CD240CE; RH; MGC103977; RHE; RhIVb(J); RhVIII
Homo sapiens	RefSeq	XM_001724689.1	ILMN_348811	LOC100129743	XM_001724689.1	XM_001724689.1		100129743	169164414	XM_001724689.1	LOC100129743	XP_001724741.1	ILMN_3269006	0003870019	M	434	ATCTGAAGTCTGTGCGGGAACTCACTTGGAAACATGAACAAGCCAAGGTC				2q33.2a	PREDICTED: Homo sapiens similar to hCG2042936 (LOC100129743), mRNA.					
Homo sapiens	RefSeq	NM_001031684.1	ILMN_7620	SFRS7	NM_001031684.1	NM_001031684.1		6432	72534659	NM_001031684.1	SFRS7	NP_001026854.1	ILMN_1778836	0000450168	S	2057	ACCTGCTGGTTGCGCAGATACCTAGGCTTGTCCATTTTATGCATTTCAGC	2	-	38824492-38824541	2p22.1c	Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa (SFRS7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8013463] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 8013463] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15169763] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	9G8; HSSG1; AAG3; ZCRB2; RBM37; ZCCHC20	9G8; HSSG1; AAG3; ZCRB2; RBM37; ZCCHC20
Homo sapiens	RefSeq	XM_941287.1	ILMN_168110	SLC25A20	XM_001133926.1	XM_001133926.1		788	113414988	XM_001133926.1	SLC25A20	XP_001133926.1	ILMN_1783060	0006860132	I	561	GTAAGGTTGTCTACTCAGGAGGCTAAGGTGGGAGGATCACTTGAATGCCA				3p21.31e	PREDICTED: Homo sapiens solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 (SLC25A20), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 9399886] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The transfer of acyl groups to and from acyl-CoA molecules to form O-acylcarnitine, which can exchange across the mitochondrial inner membrane with unacylated carnitine [goid 6853] [pmid 11257506] [evidence EXP]; Any process that modulates the frequency, rate or extent of fatty acid oxidation [goid 46320] [pmid 16054041] [evidence EXP]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Enables the directed movement of acyl carnitine into, out of, within or between cells. Acyl carnitine is the condensation product of a carboxylic acid and carnitine and is the transport form for a fatty acid crossing the mitochondrial membrane [goid 15227] [pmid 9399886] [evidence EXP]		
Homo sapiens	RefSeq	NM_017547.2	ILMN_23866	FOXRED1	NM_017547.2	NM_017547.2		55572	21361764	NM_017547.2	FOXRED1	NP_060017.1	ILMN_1762312	0001240309	S	1802	TGGCACTGACCAGGAAAGACTGCCTCTGACCCTCTTAGCAGACAGAGCCC	11	+	125653088-125653137	11q24.2c	Homo sapiens FAD-dependent oxidoreductase domain containing 1 (FOXRED1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FP634; H17	FP634; H17
Homo sapiens	RefSeq	XM_938105.1	ILMN_32086	LOC649021	XM_938105.1	XM_938105.1		649021	89038920	XM_938105.1	LOC649021	XP_943198.1	ILMN_1689755	0001660349	S	1590	TAATGTGTTTGCTTACGGGGCCGGCTCTCAATGGAATCTGGATAGTAGCC					PREDICTED: Homo sapiens hypothetical protein LOC649021 (LOC649021), mRNA.					
Homo sapiens	RefSeq	XM_939225.1	ILMN_36256	LOC645263	XM_939225.1	XM_939225.1		645263	89039046	XM_939225.1	LOC645263	XP_944318.1	ILMN_3280442	0002000678	M	89	GAAAGCCTGCTCTGCCAAAGCCACAGCTGAAGCCTAAAAAGGCCCCTACA				15q21.1a	PREDICTED: Homo sapiens hCG1793639 (LOC645263), mRNA.					
Homo sapiens	RefSeq	XM_001715283.1	ILMN_350131	LOC100128221	XM_001715283.1	XM_001715283.1		100128221	169162192	XM_001715283.1	LOC100128221	XP_001715335.1	ILMN_3270429	0004150445	M	90	GAGGAGACAACTCCAGGCAAGTGTGGGGAGCGCGAAGAAGCCGAGCCCCT				1p36.22b	PREDICTED: Homo sapiens similar to hCG2041787 (LOC100128221), mRNA.					
Homo sapiens	RefSeq	NM_014661.3	ILMN_165220	FAM53B	NM_014661.3	NM_014661.3		9679	47078280	NM_014661.3	FAM53B	NP_055476.3	ILMN_2053490	0001690600	S	5453	TGATTTGTGTTTTCAGTGTGTGGGGAAGCTGTCCTGGGGGCTGGGGCGAC	10	-	126309529-126309578	10q26.13d	Homo sapiens family with sequence similarity 53, member B (FAM53B), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	RP11-12J10.2; KIAA0140; bA12J10.2	RP11-12J10.2; KIAA0140; bA12J10.2
Homo sapiens	RefSeq	XM_927469.1	ILMN_32019	DKFZP686C2281	XM_938097.2	XM_938097.2		644296	113425544	XM_938097.2	DKFZP686C2281	XP_943190.1	ILMN_1659224	0003440753	S	284	CACGTTTTTCACATCTCCGCATCTGGACCCTGCCCAAGCGAAGGCTGATC				15q13.3d	PREDICTED: Homo sapiens similar to Formin-1 isoforms I/II/III (Limb deformity protein) (DKFZP686C2281), mRNA.					
Homo sapiens	RefSeq	NM_025212.1	ILMN_11813	CXXC4	NM_025212.1	NM_025212.1		80319	13376815	NM_025212.1	CXXC4	NP_079488.1	ILMN_1763657	0000510192	S	420	GAGGAAAAGGTGTGGGGTCTGCGTGCCCTGCAAGAGGCTCATCAACTGTG	4	-	105631447-105631496	4q24c	Homo sapiens CXXC finger 4 (CXXC4), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of Wnt receptor signaling pathway activity [goid 30178] [pmid 11113207] [evidence NAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 11113207] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	IDAX; MGC149872	IDAX; MGC149872
Homo sapiens	RefSeq	XM_941582.1	ILMN_309213	LOC389435	NM_001089587.1	NM_001089587.1		389435	147904566	NM_001089587.1	LOC389435	NP_001083056.1	ILMN_1704315	0000380491	A	28	GCCATCCAGACTGAGGAAGACCCGGAAACTTAGGGGCCACGTGAGCCACC				6q25.2b	Homo sapiens hCG21078 (LOC389435), mRNA.					
Homo sapiens	RefSeq	XM_936640.1	ILMN_46073	LOC647589	XM_936640.2	XM_936640.2		647589	113424025	XM_936640.2	LOC647589	XP_941733.2	ILMN_1758649	0000670747	S	1749	AAGGCCATTCTAGAGAGGGGAGTGTTCTGCTGCTGGCTGCCTTGCCGTCT					PREDICTED: Homo sapiens similar to sine oculis homeobox homolog 7 (LOC647589), mRNA.					
Homo sapiens	RefSeq	NM_001115.1	ILMN_13714	ADCY8	NM_001115.1	NM_001115.1		114	4557256	NM_001115.1	ADCY8	NP_001106.1	ILMN_1754440	0005310431	S	5687	GACTTGTCCAGTCCCTCAATAGGCAAAGGCAGAAGCAGCTACTCAATGAG	8	-	131861930-131861979	8q24.22a	Homo sapiens adenylate cyclase 8 (brain) (ADCY8), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8163524] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8076676] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [pmid 8076676] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [pmid 12626323] [evidence EXP]	Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin [goid 8294] [pmid 8163524] [evidence TAS]	HBAC1; ADCY3	HBAC1; ADCY3
Homo sapiens	RefSeq	NM_206866.1	ILMN_179385	BACH1	NM_206866.1	NM_206866.1		571	45827689	NM_206866.1	BACH1	NP_996749.1	ILMN_1681583	0002690743	I	79	GTGCTGAGCTGGATTTAGCGAAGACTGGTTTTGGGGACCGGAGAGCCCAG	21	+	29593686-29593735	21q21.3c	Homo sapiens BTB and CNC homology 1, basic leucine zipper transcription factor 1 (BACH1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16780588] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16780588] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9544839] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9479503] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_173488.2	ILMN_170741	SLCO6A1	NM_173488.3	NM_173488.3		133482	93277098	NM_173488.3	SLCO6A1	NP_775759.3	ILMN_1761717	0006560246	S	1984	GCGGGTTGTACCTGACAAACTGCGTTCTCTGGCCTTGGGTGTAAGCTATG	5	-	101815938-101815987	5q21.1d	Homo sapiens solute carrier organic anion transporter family, member 6A1 (SLCO6A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	MGC26949; OATPY; OATP6A1; GST	MGC26949; OATPY; OATP6A1; GST
Homo sapiens	RefSeq	XM_930149.1	ILMN_45463	LOC440434	XM_930149.1	XM_930149.1		440434	89042158	XM_930149.1	LOC440434	XP_935242.1	ILMN_1656402	0001410349	S	292	GGACTCAAGTAGGTCAAGTGGCGACAGTTTTATGTGTAGCATATGGAAGT	17	+	119841-119890	17q12c	PREDICTED: Homo sapiens hypothetical protein FLJ11822 (LOC440434), mRNA.					
Homo sapiens	RefSeq	NM_024640.3	ILMN_2794	YRDC	NM_024640.3	NM_024640.3		79693	58761509	NM_024640.3	YRDC	NP_078916.3	ILMN_2061732	0003440224	S	1550	GGTGTAATAGTGGGATGTCTGCTTAGTTGGCAGGGGTTCAGTCCAAATGG	1	-	38268850-38268899	1p34.3b	Homo sapiens yrdC domain containing (E. coli) (YRDC), nuclear gene encoding mitochondrial protein, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ23476; IRIP; FLJ26165; RP11-109P14.4; SUA5; DRIP3	FLJ23476; IRIP; FLJ26165; RP11-109P14.4; SUA5; DRIP3
Homo sapiens	RefSeq	NM_024640.3	ILMN_2794	YRDC	NM_024640.3	NM_024640.3		79693	58761509	NM_024640.3	YRDC	NP_078916.3	ILMN_1736008	0006450475	S	1263	AAGTCTCAGGTGGCTGCGTGTGGTGGCTCATGCCTGTAATCCCAACATTC	1	-	38269137-38269186	1p34.3b	Homo sapiens yrdC domain containing (E. coli) (YRDC), nuclear gene encoding mitochondrial protein, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ23476; IRIP; FLJ26165; RP11-109P14.4; SUA5; DRIP3	FLJ23476; IRIP; FLJ26165; RP11-109P14.4; SUA5; DRIP3
Homo sapiens	RefSeq	NM_020890.1	ILMN_10299	KIAA1524	NM_020890.1	NM_020890.1		57650	24308238	NM_020890.1	KIAA1524	NP_065941.1	ILMN_1728225	0006280719	S	2615	GGCTTCCTCCCTAGAGGTTCAAAAGGCACAATTAGAAGGTCGTTTGGAAG	3	-	109752807-109752856	3q13.13a	Homo sapiens KIAA1524 (KIAA1524), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17632056] [evidence IPI]	FLJ12850; MGC163436	FLJ12850; MGC163436
Homo sapiens	RefSeq	NM_020890.1	ILMN_10299	KIAA1524	NM_020890.1	NM_020890.1		57650	24308238	NM_020890.1	KIAA1524	NP_065941.1	ILMN_2099045	0000130598	S	3230	GAGAGAAGGTATGATTTTACTGCTAGAGAAGTTTGTCTCTGAAGAAGCAC	3	-	109752192-109752241	3q13.13a	Homo sapiens KIAA1524 (KIAA1524), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17632056] [evidence IPI]	FLJ12850; MGC163436	FLJ12850; MGC163436
Homo sapiens	RefSeq	NM_001004430.1	ILMN_166082	MUC17	NM_001040105.1	NM_001040105.1		140453	91982771	NM_001040105.1	MUC17	NP_001035194.1	ILMN_1724375	0007050162	S	14084	GCCCTCGACCCGCTGTTTACAACCATGACCCCTTGGACACTGGACTGCAT	7	+	100488594-100488643	7q22.1d	Homo sapiens mucin 17, cell surface associated (MUC17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [pmid 9299468] [evidence ND ]	Functions as a lubricant for an extracellular matrix, such as a mucous membrane [goid 30197] [pmid 9299468] [evidence NAS]	MUC3	MUC3
Homo sapiens	RefSeq	NM_012118.2	ILMN_170347	CCRN4L	NM_012118.2	NM_012118.2		25819	31083027	NM_012118.2	CCRN4L	NP_036250.2	ILMN_1689378	0000460484	S	1861	TCATTTTCTGCGTTTCCAGCATGCCCTTGGAAAAGACTCCCTTTAGTCCC	4	+	139967000-139967049	4q31.1b	Homo sapiens CCR4 carbon catabolite repression 4-like (S. cerevisiae) (CCRN4L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10521507] [evidence TAS]	The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10521507] [evidence TAS]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10521507] [evidence TAS]	CCR4L; MGC142060; MGC142054; MGC4120817; MGC78549; NOC	CCR4L; MGC142060; MGC142054; MGC4120817; MGC78549; NOC
Homo sapiens	RefSeq	NM_213725.1	ILMN_23085	RPLP1	NM_213725.1	NM_213725.1		6176	47524166	NM_213725.1	RPLP1	NP_998890.1	ILMN_2386530	0006380639	A	177	GCACGACGATGAGGTGACAGTCACGGCCCTGGCCAACGTCAACATTGGGA	15	+	67532389-67532413:67534563-67534587	15q23a	Homo sapiens ribosomal protein, large, P1 (RPLP1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 3323886] [evidence TAS]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 3323886] [evidence TAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 3323886] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12054647] [evidence IPI]	P1; FLJ27448; RPP1; MGC5215	P1; FLJ27448; RPP1; MGC5215
Homo sapiens	RefSeq	NM_000956.2	ILMN_6622	PTGER2	NM_000956.2	NM_000956.2		5732	31881629	NM_000956.2	PTGER2	NP_000947.2	ILMN_1703926	0005900471	S	1829	CATCAGTTTTGTTTACTCATCCTCCAGGAACTGCAGGTCAAGTTGTCAGG	14	+	51864520-51864569	14q22.1d	Homo sapiens prostaglandin E receptor 2 (subtype EP2), 53kDa (PTGER2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10462542] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10462542] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with prostaglandin E (PGE(2)) to initiate a change in cell activity [goid 4957] [pmid 10462542] [evidence TAS]; Combining with a thromboxane (TXA) to initiate a change in cell activity [goid 4960] [evidence IEA]	EP2	EP2
Homo sapiens	RefSeq	NM_002190.2	ILMN_10269	IL17A	NM_002190.2	NM_002190.2		3605	27477085	NM_002190.2	IL17A	NP_002181.1	ILMN_1774983	0004780019	S	1381	TCCAAGTTCTCGATTTCACATGCCTTCAAGACTGAACACCGACTAAGGTT	6	+	52054958-52055007	6p12.2a	Homo sapiens interleukin 17A (IL17A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 7499828] [evidence TAS]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 7499828] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 7499828] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7499828] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 7499828] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [pmid 8390535] [evidence TAS]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 7499828] [evidence TAS]	IL-17A; IL-17; CTLA8; IL17	IL-17A; IL-17; CTLA8; IL17
Homo sapiens	RefSeq	NM_032823.3	ILMN_19302	C9ORF3	NM_032823.3	NM_032823.3		84909	24432057	NM_032823.3	C9orf3	NP_116212.3	ILMN_1674629	0000160307	S	2497	GGTCCCAGCCAGGCACACACAAAAGGCAGATTCTCGTAAACGCAGCCTCC	9	+	96888939-96888988	9q22.32a	Homo sapiens chromosome 9 open reading frame 3 (C9orf3), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	C90RF3; FLJ14675; APO; AP-O	C90RF3; FLJ14675; APO; AP-O
Homo sapiens	RefSeq	NM_001002762.1	ILMN_22806	DNAJB12	NM_001002762.1	NM_001002762.1		54788	50593536	NM_001002762.1	DNAJB12	NP_001002762.1	ILMN_1712929	0003780326	I	2461	TACTTGTGTGGCATAAGCTAGAGGAGCCGGTGCCGCCTGAATGCCGAGCT	10	-	73764405-73764454	10q22.1f	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 12 (DNAJB12), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	DJ10; DKFZp586B2023	DJ10; DKFZp586B2023
Homo sapiens	RefSeq	NM_000558.3	ILMN_2789	HBA1	NM_000558.3	NM_000558.3		3039	14456711	NM_000558.3	HBA1	NP_000549.1	ILMN_3240144	0003460164	S	95	GCGCACGCTGGCGAGTATGGTGCGGAGGCCCTGGAGAGGATGTTCCTGTC	16	+	166773-166810:166928-166939	16p13.3f	Homo sapiens hemoglobin, alpha 1 (HBA1), mRNA.	An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [evidence IEA]; An iron-containing, oxygen carrying complex. In vertebrates it is made up of two pairs of associated globin polypeptide chains, each chain carrying a noncovalently bound heme prosthetic group [goid 5833] [pmid 7555018] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of oxygen (O2) into, out of, within or between cells [goid 15671] [pmid 7518430] [evidence TAS]	Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Enables the directed movement of oxygen into, out of, within or between cells [goid 5344] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12072504] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7518430] [evidence TAS]; Interacting selectively with oxygen (O2) [goid 19825] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC126895; MGC126897; CD31	MGC126895; MGC126897; CD31
Homo sapiens	RefSeq	NM_021238.2	ILMN_372014	FAM60A	NM_021238.2	NM_021238.2		58516	209447085	NM_021238.2	FAM60A	NP_067061.1	ILMN_3196019	0006940343	A	2511	AGCATTGCCAGTTCAGTCTTTTCAAAATGAGGGAGAAACATTTGCCTGCC	12	-	31434073-31434122	12p11.21b	Homo sapiens family with sequence similarity 60, member A (FAM60A), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	XM_939833.1	ILMN_33931	LOC650751	XM_939833.2	XM_939833.2		650751	113424816	XM_939833.2	LOC650751	XP_944926.2	ILMN_1689324	0004230593	S	49	GCAGGACAAAGCCTTGAGCAGCCCTCTGAAGTGACAGCTGTGGAAGGAGC					PREDICTED: Homo sapiens similar to immunoglobulin iota chain preproprotein (LOC650751), mRNA.					
Homo sapiens	RefSeq	NM_001004480.1	ILMN_28949	OR11H6	NM_001004480.1	NM_001004480.1		122748	52218859	NM_001004480.1	OR11H6	NP_001004480.1	ILMN_1752218	0001300711	S	599	GCCCATTGTTTGCACTGGCCTGCATCTCTGCTCCTTCCACTGAGCTTATC	14	+	19762307-19762356	14q11.2b	Homo sapiens olfactory receptor, family 11, subfamily H, member 6 (OR11H6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	Unigene	Hs.561603	ILMN_114974	HS.561603	Hs.561603		Hs.561603		23066233	BU580973			ILMN_1832672	0003930504	S	305	GCCTGTTGCTTTGGCTTGTATTTTCAGTGCTGTGTTGAATAAGAGTGGTG					in34h07.y1 Human Fetal Pancreas 1B Homo sapiens cDNA 5 similar to TR:Q14754 Q14754 ORFII. ;, mRNA sequence					
Homo sapiens	RefSeq	NM_020905.1	ILMN_3300	RDH14	NM_020905.2	NM_020905.2		57665	141802124	NM_020905.2	RDH14	NP_065956.1	ILMN_1705469	0007040220	S	894	TCCAGTAGAAGGTGCCCAGACTTCCATTTATTTGGCCTCTTCACCTGAGG	2	-	18600067-18600116	2p24.2a	Homo sapiens retinol dehydrogenase 14 (all-trans/9-cis/11-cis) (RDH14), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine) [goid 9116] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: a 5'-ribonucleotide + H2O = a ribonucleoside + phosphate [goid 8253] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	PAN2	PAN2
Homo sapiens	RefSeq	XM_377500.3	ILMN_46468	LOC401895	XM_377500.3	XM_377500.3		401895	89050436	XM_377500.3	LOC401895	XP_377500.3	ILMN_1766600	0004640097	S	326	ACGACGGCAAGACCTTCAAGCAGGTGGAGATGGCCGGGCGCGGCCTGTAA				19p13.3i	PREDICTED: Homo sapiens similar to insulinoma protein (rig) (LOC401895), mRNA.					
Homo sapiens	RefSeq	NM_017552.1	ILMN_306965	ATAD2B	NM_017552.1	NM_017552.1		54454	153792535	NM_017552.1	ATAD2B	NP_060022.1	ILMN_3235282	0001230131	S	7432	GTGGGGACCCTGGGGGCTTTTTGAAGATGATGGAACCGCACTAGGGTTGA	2	-	23972767-23972816	2p24.1a-p23.3d	Homo sapiens ATPase family, AAA domain containing 2B (ATAD2B), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	MGC88424; KIAA1240	MGC88424; KIAA1240
Homo sapiens	RefSeq	NM_025079.1	ILMN_18682	ZC3H12A	NM_025079.1	NM_025079.1		80149	13376631	NM_025079.1	ZC3H12A	NP_079355.1	ILMN_1672295	0002490017	S	2384	AGGCCTCATCTGTGCTCTCGCTGGGCACGTGGCTTCATGTCAGTAAGCAA	1	+	37722267-37722316	1p34.3c	Homo sapiens zinc finger CCCH-type containing 12A (ZC3H12A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MCPIP; FLJ23231; dJ423B22.1; RP3-423B22.1	MCPIP; FLJ23231; dJ423B22.1; RP3-423B22.1
Homo sapiens	RefSeq	NM_004449.3	ILMN_19553	ERG	NM_004449.3	NM_004449.3		2078	46255021	NM_004449.3	ERG	NP_004440.1	ILMN_1768301	0002320259	I	156	AGCTGGTAGATGGGCTGGCTTACTGAAGGACATGATTCAGACTGTCCCGG	21	-	38869475-38869494:38869495-38869524	21q22.2a	Homo sapiens v-ets erythroblastosis virus E26 oncogene homolog (avian) (ERG), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8502479] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 8502479] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8502479] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8502479] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 3476934] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 8502479] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11791185] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	erg-3; p55	erg-3; p55
Homo sapiens	RefSeq	XR_039661.1	ILMN_342798	LOC100128889	XR_039661.1	XR_039661.1		100128889	169162385	XR_039661.1	LOC100128889		ILMN_3262020	0006020403	M	48	CTGAGAGGAATGGGAAATCAACAAGATGAAGCCCCCTCCCAATCCCAGAC				1q25.1b	PREDICTED: Homo sapiens misc_RNA (LOC100128889), miscRNA.					
Homo sapiens	Unigene	Hs.110524	ILMN_75081	HS.110524	Hs.110524		Hs.110524		28846346	CB305835			ILMN_1888335	0001570689	S	585	CTGGGGTGAGGACAGCGTCAGCCCTGAAGTTTTGAGCCCATTCCTGGAAC	4	+	9436447-9436496		UI-CF-EN1-aeg-h-11-0-UI.s1 UI-CF-EN1 Homo sapiens cDNA clone UI-CF-EN1-aeg-h-11-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.554667	ILMN_112082	HS.554667	Hs.554667		Hs.554667		16552922	AK057291			ILMN_1854030	0006650072	S	1832	GGGGAGCTGACCACGAGCCCCAGAAAACCTTGTGCACCATCTATGCAGAG	2	-	30754349-30754398		Homo sapiens cDNA FLJ32729 fis, clone TESTI2001082					
Homo sapiens	RefSeq	NM_000825.2	ILMN_28035	GNRH1	NM_000825.3	NM_000825.3		2796	133908609	NM_000825.3	GNRH1	NP_000816.3	ILMN_1745991	0002340553	S	1895	AATGCACCACGCACCAGCCACGTTCTCCCCTCCGAGACCTGAAAGGAGCT	8	-	25335008-25335057	8p21.2c	Homo sapiens gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) (GNRH1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8692981] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8692981] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 1310542] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 2867548] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10832105] [evidence TAS]	 [goid 5183] [pmid 10832105] [evidence TAS]	LHRH; LNRH; GRH; GNRH	GNRH; LHRH; LNRH; GRH
Homo sapiens	Unigene	Hs.562504	ILMN_115591	HS.562504	Hs.562504		Hs.562504		6869323	AW364673			ILMN_1874323	0000520491	S	72	GGGTCAGAGCTTGTGCCAGATGCCAGTCTTCTGCCTTCCAGTCTTATAGT	8	+	121135533-121135582		PM3-DT0037-231299-001-e06 DT0037 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_001876.2	ILMN_14446	CPT1A	NM_001876.2	NM_001876.2		1374	73623029	NM_001876.2	CPT1A	NP_001867.2	ILMN_1687589	0002680458	I	2565	CCTGTGAAGCATAACCCCACTACTTCCAGACTTGCCCTCCCTTGGGGGAC	11	-	68281471-68281520	11q13.2b	Homo sapiens carnitine palmitoyltransferase 1A (liver) (CPT1A), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 7892212] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The metabolic oxidation of a long-chain fatty acid by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A [goid 6635] [pmid 7892212] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine [goid 4095] [pmid 7892212] [evidence TAS]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CPT1-L; L-CPT1; CPT1	CPT1-L; L-CPT1; CPT1
Homo sapiens	RefSeq	NM_000368.3	ILMN_182048	TSC1	NM_000368.3	NM_000368.3		7248	56699466	NM_000368.3	TSC1	NP_000359.1	ILMN_2246510	0004040373	I	8415	ACTTTCCCGCCTCAATCCTAAAAGCATGTCAACAATCCACATCAGATGCC	9	-	134756707-134756756	9q34.13b	Homo sapiens tuberous sclerosis 1 (TSC1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16636147] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9580671] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10585443] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15589136] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15314020] [evidence EXP]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [pmid 10806479] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [pmid 10806479] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 10806479] [evidence IDA]; A heterodimeric protein complex consisting of tumerin and hamartin; its formation may regulate hamartin homomultimer formation. The complex acts as a GTPase activating protein (GAP) for the small GTPase (Rheb), and inhibits the TOR signaling pathway [goid 33596] [pmid 9580671] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [pmid 10806479] [evidence IMP]; The directed movement of rRNA from the nucleus to the cytoplasm [goid 6407] [pmid 17308101] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10915759] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [pmid 17308101] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31397] [pmid 11175345] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the TOR signaling pathway [goid 32007] [pmid 17308101] [evidence IMP]; Any process that initiates the activity of an inactive GTPase of the Rho family through the replacement of GDP by GTP [goid 32862] [pmid 10806479] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [pmid 16996505] [evidence IDA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [pmid 17308101] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that reduces cell size [goid 45792] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51492] [pmid 10806479] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of focal adhesion formation, the establishment and maturation of focal adhesions [goid 51894] [pmid 10806479] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that reduces cell size [goid 45792] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]	Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 10806479] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 12226091] [evidence IPI]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 10585443] [evidence IPI]	TSC; LAM; MGC86987; KIAA0243	TSC; LAM; KIAA0243; MGC86987
Homo sapiens	RefSeq	NM_001008567.1	ILMN_182048	TSC1	NM_000368.3	NM_000368.3		7248	56699466	NM_000368.3	TSC1	NP_000359.1	ILMN_1758378	0005720605	A	1080	AGCCCGCTTTCCTCATCGTTCAGCCGATGTCACCACCAGCCCTTATGCTG	9	-	134777507-134777556	9q34.13b	Homo sapiens tuberous sclerosis 1 (TSC1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16636147] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9580671] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10585443] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15589136] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15314020] [evidence EXP]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [pmid 10806479] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [pmid 10806479] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 10806479] [evidence IDA]; A heterodimeric protein complex consisting of tumerin and hamartin; its formation may regulate hamartin homomultimer formation. The complex acts as a GTPase activating protein (GAP) for the small GTPase (Rheb), and inhibits the TOR signaling pathway [goid 33596] [pmid 9580671] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [pmid 10806479] [evidence IMP]; The directed movement of rRNA from the nucleus to the cytoplasm [goid 6407] [pmid 17308101] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10915759] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [pmid 17308101] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31397] [pmid 11175345] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the TOR signaling pathway [goid 32007] [pmid 17308101] [evidence IMP]; Any process that initiates the activity of an inactive GTPase of the Rho family through the replacement of GDP by GTP [goid 32862] [pmid 10806479] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [pmid 16996505] [evidence IDA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [pmid 17308101] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that reduces cell size [goid 45792] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51492] [pmid 10806479] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of focal adhesion formation, the establishment and maturation of focal adhesions [goid 51894] [pmid 10806479] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that reduces cell size [goid 45792] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]	Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 10806479] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 12226091] [evidence IPI]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 10585443] [evidence IPI]	TSC; LAM; MGC86987; KIAA0243	TSC; LAM; KIAA0243; MGC86987
Homo sapiens	RefSeq	NM_000368.3	ILMN_182048	TSC1	NM_000368.3	NM_000368.3		7248	56699466	NM_000368.3	TSC1	NP_000359.1	ILMN_1797367	0003290382	I	8096	CCACCTCTTACAGTGTTTGGACAGGAGGGTATGGTGCTGCTCTGTGTAGC	9	-	134757026-134757075	9q34.13b	Homo sapiens tuberous sclerosis 1 (TSC1), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 16636147] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9580671] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10585443] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15589136] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15314020] [evidence EXP]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [pmid 10806479] [evidence IDA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [pmid 10806479] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 10806479] [evidence IDA]; A heterodimeric protein complex consisting of tumerin and hamartin; its formation may regulate hamartin homomultimer formation. The complex acts as a GTPase activating protein (GAP) for the small GTPase (Rheb), and inhibits the TOR signaling pathway [goid 33596] [pmid 9580671] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [pmid 10806479] [evidence IMP]; The directed movement of rRNA from the nucleus to the cytoplasm [goid 6407] [pmid 17308101] [evidence IMP]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 10915759] [evidence IMP]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 17148] [pmid 17308101] [evidence IMP]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the addition of ubiquitin moieties to a protein [goid 31397] [pmid 11175345] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the TOR signaling pathway [goid 32007] [pmid 17308101] [evidence IMP]; Any process that initiates the activity of an inactive GTPase of the Rho family through the replacement of GDP by GTP [goid 32862] [pmid 10806479] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32868] [pmid 16996505] [evidence IDA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that modulates the frequency, rate or extent of phosphoprotein phosphatase activity, the catalysis of the hydrolysis of phosphate from a phosphoprotein [goid 43666] [pmid 17308101] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that reduces cell size [goid 45792] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts [goid 51492] [pmid 10806479] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of focal adhesion formation, the establishment and maturation of focal adhesions [goid 51894] [pmid 10806479] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IEA]; The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon [goid 21987] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a prolongation or process extending from a cell, e.g. a flagellum or axon [goid 30030] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that reduces cell size [goid 45792] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein kinase activity [goid 45859] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell) [goid 50808] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence IEA]	Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 10806479] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 12226091] [evidence IPI]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 10585443] [evidence IPI]	TSC; LAM; MGC86987; KIAA0243	TSC; LAM; KIAA0243; MGC86987
Homo sapiens	RefSeq	NM_152439.2	ILMN_7183	BEST3	NM_152439.2	NM_152439.2		144453	115527105	NM_152439.2	BEST3	NP_689652.2	ILMN_2410182	0001770253	A	1623	CCTCCCCAAAAGCAGCATATTAGGCCCAGGACATACCTGAAGGCTGGTCG	12	-	70048594-70048643	12q15c	Homo sapiens bestrophin 3 (BEST3), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The directed movement of inorganic anions into, out of, within or between cells. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage [goid 15698] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 43271] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of facilitated diffusion of a chloride (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5254] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	MGC13168; VMD2L3; MGC40411	MGC40411
Homo sapiens	RefSeq	XM_936363.1	ILMN_34110	LOC642207	XM_936363.1	XM_936363.1		642207	89026492	XM_936363.1	LOC642207	XP_941456.1	ILMN_1744618	0006940131	S	457	CTGCTCCAGTGTCAGCTTGGTTCCCTAGGAAATGGGGTTTCTAGAACCTG					PREDICTED: Homo sapiens similar to T-cell receptor beta chain V region CTL-L17 precursor (LOC642207), mRNA.					
Homo sapiens	RefSeq	NM_003442.3	ILMN_172271	ZNF143	NM_003442.4	NM_003442.4		7702	116014327	NM_003442.4	ZNF143	NP_003433.3	ILMN_1674399	0003830403	S	2066	GGAGTCTTTCATCTTCTGGCAGCAGAAATCCATGAAGCCCGGGCCCAGGA	11	+	9494424-9494473	11p15.4a	Homo sapiens zinc finger protein 143 (ZNF143), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9566884] [evidence TAS]; Any process that modulates the frequency, rate or extent of transcription from an RNA ploymerase III promoter [goid 6359] [pmid 9566884] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 9009278] [evidence TAS]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 9009278] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	pHZ-1; STAF; SBF	pHZ-1; STAF; SBF
Homo sapiens	RefSeq	XR_018211.2	ILMN_165595	LOC647588	XR_018211.2	XR_018211.2		647588	169162211	XR_018211.2	LOC647588		ILMN_3248786	0003460678	S	2441	GGACCCTGATTACGATGAATGGGGCACATGGTCCCAATGCTGGAGCTCCT					PREDICTED: Homo sapiens hypothetical LOC647588 (LOC647588), mRNA.					
Homo sapiens	RefSeq	NM_005430.2	ILMN_22389	WNT1	NM_005430.2	NM_005430.2		7471	16936523	NM_005430.2	WNT1	NP_005421.1	ILMN_1814443	0000770370	S	1870	GGGAACCAGCAGAAATGCCCCCATTCTCCCAGTCTCTGTCGTGGAGCCAT	12	+	47662249-47662298	12q13.12a	Homo sapiens wingless-type MMTV integration site family, member 1 (WNT1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]	The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [pmid 15592430] [evidence TAS]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 15592430] [evidence TAS]; The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors leads to an increase in intracellular calcium and activation of protein kinase C (PKC) [goid 7223] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 2202907] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 15592430] [evidence TAS]; A developmental process occurring during brain development, independent of morphogenetic (shape) change, that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate [goid 22004] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 15592430] [evidence TAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whereby a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed [goid 48664] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 15592430] [evidence NAS]	INT1	INT1
Homo sapiens	RefSeq	XM_496952.2	ILMN_169735	LOC441326	XM_496955.3	XM_496955.3		441326	113419945	XM_496955.3	LOC441326	XP_496955.1	ILMN_1664937	0001740400	S	368	GGAAACCTCCAGAGAAGCCGCTGCCGAATGGAAAAGGATCCACGGAGTCT	8	+	7619342-7619391	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC441326 (LOC441326), mRNA.					
Homo sapiens	RefSeq	XM_496955.2	ILMN_169735	LOC441326	XM_496955.3	XM_496955.3		441326	113419945	XM_496955.3	LOC441326	XP_496955.1	ILMN_1675099	0003520373	S	908	AATTCCCCAAGAAACCGAGACTGGGTCCCTTCCAGATCCCCGAAAGCGCC	8	+	7620546-7620595	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC441326 (LOC441326), mRNA.					
Homo sapiens	RefSeq	NM_032360.2	ILMN_17842	ACBD6	NM_032360.2	NM_032360.2		84320	34147419	NM_032360.2	ACBD6	NP_115736.1	ILMN_1684271	0000870349	S	839	GAGACCAGGATGGCTGCCTGCCAGAGGAGGTGACAGGCTGCAAAACAGTT	1	-	178524159-178524208	1q25.2c-q25.3a	Homo sapiens acyl-Coenzyme A binding domain containing 6 (ACBD6), mRNA.			Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC2404	MGC2404
Homo sapiens	RefSeq	NM_138555.1	ILMN_13891	KIF23	NM_138555.1	NM_138555.1		9493	20143966	NM_138555.1	KIF23	NP_612565.1	ILMN_1716553	0002850474	I	2357	GGCGTAGGCAGCAGGAGCCAGGACAAAGCAAAACTTGTATCGTGTCAGAC	15	+	67520333-67520382	15q23a	Homo sapiens kinesin family member 23 (KIF23), transcript variant 1, mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15199097] [evidence EXP]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 1406973] [evidence TAS]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [pmid 1406973] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; Lengthening of the distance between poles of the mitotic spindle [goid 22] [pmid 1406973] [evidence TAS]; Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 1406973] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18329369] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MKLP-1; CHO1; KNSL5; MKLP1	MKLP-1; CHO1; KNSL5; MKLP1
Homo sapiens	RefSeq	NM_006132.1	ILMN_3408	BMP1	NM_006132.1	NM_006132.1		649	5902814	NM_006132.1	BMP1	NP_006123.1	ILMN_1800776	0006130181	I	1393	CAGGAGTCCTGGCATCATTAGTCCCAGATAGCTGCATTACTCACTTGCTG	8	+	22105733-22105782	8p21.3a	Homo sapiens bone morphogenetic protein 1 (BMP1), transcript variant BMP1-4, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes [goid 1502] [pmid 3201241] [evidence TAS]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 16824737] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7798260] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [pmid 16824737] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	PCOLC; TLD	PCOLC; TLD
Homo sapiens	RefSeq	XM_927246.1	ILMN_36848	LOC643998	XM_927246.1	XM_927246.1		643998	88983840	XM_927246.1	LOC643998	XP_932339.1	ILMN_1735065	0005910168	S	4246	TGAGAATGGGGATTCTTGCTTAAACGAAACCTGAAGGACGGGCATCTTTC	5	-	70187873-70187922		PREDICTED: Homo sapiens similar to cadherin 12, type 2 preproprotein (LOC643998), mRNA.					
Homo sapiens	RefSeq	NM_007029.2	ILMN_27672	STMN2	NM_007029.2	NM_007029.2		11075	34850060	NM_007029.2	STMN2	NP_008960.2	ILMN_2126038	0002030026	S	567	ACTCCAGGTTGAACTGTCTGGCTGAAGCAAGGGAGGGTCTGGCACGCCCC	8	+	80577085-80577109:80577110-80577134	8q21.13a	Homo sapiens stathmin-like 2 (STMN2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence NAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	SCG10; SCGN10; SGC10	SCG10; SCGN10; SGC10
Homo sapiens	RefSeq	NM_007029.2	ILMN_27672	STMN2	NM_007029.2	NM_007029.2		11075	34850060	NM_007029.2	STMN2	NP_008960.2	ILMN_1795679	0000830672	S	93	GCTGTCCATGCTGTCACTGATCTGCTCTTGCTTTTACCCGGAACCTCGCA	8	+	80549059-80549108	8q21.13a	Homo sapiens stathmin-like 2 (STMN2), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence NAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	SCG10; SCGN10; SGC10	SCG10; SCGN10; SGC10
Homo sapiens	RefSeq	NM_173353.2	ILMN_10138	TPH2	NM_173353.2	NM_173353.2		121278	31795562	NM_173353.2	TPH2	NP_775489.2	ILMN_1734352	0004260341	S	2192	GTAGGTTGCGTTGACCTTGTAGAACCTGAGTTATGACAAGCTTCCTGAAG	12	+	70712320-70712369	12q21.1a	Homo sapiens tryptophan hydroxylase 2 (TPH2), mRNA.		The chemical reactions and pathways resulting in the formation from tryptophan of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 6587] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan) [goid 9072] [evidence IEA]; The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties [goid 42427] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: L-tryptophan + tetrahydrobiopterin + O2 = 5-hydroxy-L-tryptophan + 4-alpha-hydroxytetrahydrobiopterin + H2O [goid 4510] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Catalysis of the reaction: L-tryptophan + tetrahydrobiopterin + O2 = 5-hydroxy-L-tryptophan + 4-alpha-hydroxytetrahydrobiopterin + H2O [goid 4510] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with an amino acid, organic acids containing one or more amino substituents [goid 16597] [evidence IEA]	FLJ37295; MGC138871; NTPH; MGC138872	FLJ37295; MGC138871; NTPH; MGC138872
Homo sapiens	RefSeq	XM_374273.3	ILMN_37660	LOC389669	XM_374273.3	XM_374273.3		389669	89028143	XM_374273.3	LOC389669	XP_374273.3	ILMN_1651281	0001500523	S	170	ATCAGCACTGTTGAAAGAAGAAAAAATGTCAGTGCTATCTCCTGAAATCA	8	-	74334222-74334247:74334248-74334271		PREDICTED: Homo sapiens hypothetical LOC389669 (LOC389669), mRNA.					
Homo sapiens	RefSeq	NM_004404.3	ILMN_4091	SEPT2	NM_004404.3	NM_004404.3		4735	56550108	NM_004404.3	SEPT2	NP_004395.1	ILMN_2365711	0000630601	A	3101	AGGGAGGACCCACACTGCTACACTTCTGATCCCCTTTGGTTTTACTACCC	2	+	241941906-241941955	2q37.3f	Homo sapiens septin 2 (SEPT2), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10942595] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10942595] [evidence IDA]; Any of several heterooligomeric complexes containing multiple septins [goid 31105] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10321247] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	KIAA0158; NEDD5; hNedd5; DIFF6; Pnutl3	KIAA0158; NEDD5; hNedd5; DIFF6; Pnutl3
Homo sapiens	RefSeq	NM_003098.2	ILMN_183894	SNTA1	NM_003098.2	NM_003098.2		6640	18765742	NM_003098.2	SNTA1	NP_003089.1	ILMN_1753241	0005690431	S	2004	CCTGCTGCCCCCCTCCACCAGTGCCTTTTGCAGAGAGATATTTTGTGTAC	20	-	31996049-31996098	20q11.21c	Homo sapiens syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component) (SNTA1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8576247] [evidence TAS]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]	SNT1; dJ1187J4.5; TACIP1	SNT1; dJ1187J4.5; TACIP1
Homo sapiens	RefSeq	NM_173500.2	ILMN_177646	TTBK2	NM_173500.3	NM_173500.3		146057	116812623	NM_173500.3	TTBK2	NP_775771.3	ILMN_1705834	0001510164	S	4060	GCATTGCAAACCCAGCAAGAATGGCCTGAAAGGATCCGGCAGCCTCCACC	15	-	43038057-43038106	15q15.2a	Homo sapiens tau tubulin kinase 2 (TTBK2), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SCA11; KIAA0847; TTBK	KIAA0847; TTBK
Homo sapiens	Unigene	Hs.441742	ILMN_92394	HS.441742	Hs.441742		Hs.441742		24791462	CA428742			ILMN_1892506	0000840612	S	282	GAAGGATAGAGTGGAACCCTGGTCGTCGGGGTTTTTAACCTCATCAAACC	12	+	2722554-2722603		UI-H-DF0-ber-l-20-0-UI.s1 NCI_CGAP_DF0 Homo sapiens cDNA clone UI-H-DF0-ber-l-20-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_013321.1	ILMN_12745	SNX8	NM_013321.1	NM_013321.1		29886	23943857	NM_013321.1	SNX8	NP_037453.1	ILMN_1804051	0003930356	S	1274	ACCTCCCACATCCTCCGCGCCTTCGTCAACTCTCAGATCCAAGGGCACAA	7	-	2296649-2296658:2297000-2297039	7p22.2c	Homo sapiens sorting nexin 8 (SNX8), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	Mvp1	Mvp1
Homo sapiens	RefSeq	NM_001546.2	ILMN_23627	ID4	NM_001546.2	NM_001546.2		3400	19923138	NM_001546.2	ID4	NP_001537.1	ILMN_1721758	0000460364	S	2043	TTCTCTGCTTGCTACCAAAGGACAAACTCTTGGAAATGAACACTTTCTGC	6	+	19840614-19840663	6p22.3c	Homo sapiens inhibitor of DNA binding 4, dominant negative helix-loop-helix protein (ID4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 7665172] [evidence TAS]; The expansion of a neuroblast population by cell division. A neuroblast is any cell that will divide and give rise to a neuron [goid 7405] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The progression of the hippocampus over time from its initial formation until its mature state [goid 21766] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron residing in the cerebral cortex [goid 21895] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of neuron differentiation [goid 45665] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte differentiation [goid 48712] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 7665172] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	NM_004329.2	ILMN_170500	BMPR1A	NM_004329.2	NM_004329.2		657	41349436	NM_004329.2	BMPR1A	NP_004320.2	ILMN_2095577	0004290500	S	253	GGCTGGAGGATGCGTTCCCTGGGGTCCGGACTTATGAAAATATGCATCAG	10	+	88506628-88506656:88516396-88516416	10q23.2a	Homo sapiens bone morphogenetic protein receptor, type IA (BMPR1A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17356069] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8397373] [evidence TAS]	The process by which the Mullerian ducts, primordia of the oviducts, uterus and upper vagina, undergo regression in male embryos [goid 1880] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12065756] [evidence IDA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 16886151] [evidence IMP]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 8397373] [evidence TAS]; The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation [goid 7398] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The establishment, maintenance and elaboration of the dorsal/ventral axis [goid 9950] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of the lung over time, from its formation to the mature structure. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the oesophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax [goid 30324] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [pmid 18436533] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 18436533] [evidence IDA]; The process by which the anatomical structures of the hindlimb are generated and organized. Morphogenesis pertains to the creation of form [goid 35137] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [pmid 18436533] [evidence IMP]; The process whose specific outcome is the progression of the mesendoderm over time, from its formation to the mature structure. In animal embryos, mesendoderm development gives rise to both mesoderm and endoderm tissues [goid 48382] [evidence IEA]; Any process that activates or increases the rate or extent of epithelial cell proliferation [goid 50679] [evidence IEA]; The process whose specific outcome is the progression of the cartilage over time, from its formation to the mature structure. Cartilage is a connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate [goid 51216] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with transforming growth factor beta to initiate a change in cell activity [goid 5024] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12065756] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 18436533] [evidence IDA]; Interacting selectively with a SMAD signaling protein [goid 46332] [pmid 12065756] [evidence IDA]	CD292; ALK3; ACVRLK3	CD292; ALK3; ACVRLK3
Homo sapiens	RefSeq	NM_198996.2	ILMN_9025	LIPI	NM_198996.2	NM_198996.2		149998	61742625	NM_198996.2	LIPI	NP_945347.1	ILMN_1805609	0004010373	S	1269	GCATTGGTTTGACATATTTCCAGAGCTCAAATCTGCAGTGTTCCACATGC	21	-	15516993-15517042	21q11.2c	Homo sapiens lipase, member I (LIPI), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	LPDL; PRED5	LPDL; PRED5
Homo sapiens	RefSeq	NM_004844.2	ILMN_17472	SH3BP5	NM_004844.3	NM_004844.3		9467	109134335	NM_004844.3	SH3BP5	NP_004835.2	ILMN_1675898	0004860577	I	186	CTGCATGGACGCGGCACTGAAGCGGAGCCGCTCGGAGGAGCCAGCCGAAA	3	-	15373869-15373915:15373916-15373918	3p24.3e	Homo sapiens SH3-domain binding protein 5 (BTK-associated) (SH3BP5), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9571151] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10339589] [evidence IDA]	Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [pmid 10339589] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9571151] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	SAB	SAB
Homo sapiens	RefSeq	NM_014498.3	ILMN_4644	GOLIM4	NM_014498.3	NM_014498.3		27333	154813202	NM_014498.3	GOLIM4	NP_055313.1	ILMN_3245116	0001820451	S	2390	CGGGGCTGCAGTTGCTGAGAAATCACATCGAAGAGCTGAAATGTAGCGGC	3	-	169210746-169210750:169210751-169210795	3q26.2a	Homo sapiens golgi integral membrane protein 4 (GOLIM4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 9201717] [evidence TAS]; The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum [goid 5801] [pmid 9201717] [evidence TAS]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9201717] [evidence TAS]; A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance [goid 30139] [pmid 9201717] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		P138; GIMPC; GOLPH4; GPP130	P138; GIMPC; GPP130
Homo sapiens	RefSeq	NM_144775.1	ILMN_30054	SMCR8	NM_144775.2	NM_144775.2		140775	146260267	NM_144775.2	SMCR8	NP_658988.2	ILMN_1794147	0005340722	S	3249	CATGCAGGAATCTCCAGGGACCAGCCACCCCATGCTCAGGTTTGACTATG	17	+	18167034-18167083	17p11.2f	Homo sapiens Smith-Magenis syndrome chromosome region, candidate 8 (SMCR8), mRNA.				FLJ34716	
Homo sapiens	RefSeq	XM_942252.1	ILMN_41675	LOC652672	XM_942252.1	XM_942252.1		652672	89076884	XM_942252.1	LOC652672	XP_947345.1	ILMN_1782685	0006960020	S	1	ATGACAATGTATGACGATGGCAGCGGTATGAAGCGAGAGGCCACTGCAGA					PREDICTED: Homo sapiens similar to damage-specific DNA binding protein 1 (LOC652672), mRNA.					
Homo sapiens	RefSeq	XM_943793.1	ILMN_32812	FLJ12334	XM_943793.1	XM_943793.1		400946	88954632	XM_943793.1	FLJ12334	XP_948886.1	ILMN_1775664	0007570474	A	806	GCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGG					PREDICTED: Homo sapiens hypothetical gene supported by AK022396; AK097927, transcript variant 4 (FLJ12334), mRNA.					
Homo sapiens	RefSeq	NM_001878.2	ILMN_16252	CRABP2	NM_001878.2	NM_001878.2		1382	6382069	NM_001878.2	CRABP2	NP_001869.1	ILMN_1690170	0003400296	S	803	CCAAGTCAGCAGTCCTAGCCCCAAACCAGCCCAGAGCAGGGTCTCTCTAA	1	-	156669519-156669568	1q23.1a	Homo sapiens cellular retinoic acid binding protein 2 (CRABP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. Morphogenesis pertains to the creation of form. The forelimbs are the front limbs of an animal [goid 35115] [evidence IEA]; The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A [goid 42573] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1334086] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1654334] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 1654334] [evidence TAS]	Interacting selectively with retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid [goid 1972] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Interacting selectively with retinal, one of the forms of vitamin A. Retinal plays an important role in the visual process in most vertebrates, combining with opsins to form visual pigments in the retina [goid 16918] [evidence IEA]; Interacting selectively with retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation [goid 19841] [evidence IEA]	CRABP-II; RBP6	CRABP-II; RBP6
Homo sapiens	Unigene	Hs.579351	ILMN_131532	HS.579351	Hs.579351		Hs.579351		2458091	AA609663			ILMN_1869836	0004670646	S	209	GGCCTGAGGTCACTGTGGCATGTTATTGGTCCCTGTGGTCTCCAGAAGGG	17_random	-	74974211-74974260		af16c04.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1031814 3, mRNA sequence					
Homo sapiens	RefSeq	XM_933328.1	ILMN_30605	LOC643918	XM_933328.1	XM_933328.1		643918	89047133	XM_933328.1	LOC643918	XP_938421.1	ILMN_1654474	0006400091	I	1581	TTAAAGCTCTAAATCTCATTTCCACTTAGATTTTAATGTTGCATTGTAAC	18	-	35041555-35041604		PREDICTED: Homo sapiens hypothetical protein LOC643917, transcript variant 3 (LOC643918), mRNA.					
Homo sapiens	RefSeq	XM_933328.1	ILMN_30605	LOC643918	XM_933328.1	XM_933328.1		643918	89047133	XM_933328.1	LOC643918	XP_938421.1	ILMN_1674694	0004070129	A	224	AATGTGGGGGCACCAGAAGCGGGCACCGTTGAGCTGTTGCAACTGTTCTG	18	-	35585293-35585322:35634031-35634050		PREDICTED: Homo sapiens hypothetical protein LOC643917, transcript variant 3 (LOC643918), mRNA.					
Homo sapiens	RefSeq	NM_002231.3	ILMN_162780	CD82	NM_002231.3	NM_002231.3		3732	67782352	NM_002231.3	CD82	NP_002222.1	ILMN_1662973	0005130136	I	510	TACTTTGCTTTCCTGCTCCTGATCCTCATTGCCCAGGTGACGGCCGGGGC	11	+	44583481-44583530	11p11.2d	Homo sapiens CD82 molecule (CD82), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7754374] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1842498] [evidence TAS]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15205336] [evidence IPI]	SAR2; TSPAN27; GR15; ST6; KAI1; 4F9; C33; IA4; R2	SAR2; TSPAN27; GR15; ST6; KAI1; 4F9; C33; IA4; R2
Homo sapiens	RefSeq	NM_014790.3	ILMN_25887	JAKMIP2	NM_014790.3	NM_014790.3		9832	45238581	NM_014790.3	JAKMIP2	NP_055605.2	ILMN_1702320	0002100253	S	2868	CACCAGTGAGAGGGAGATCAAAAGCTAAGAACTACCCTGTAGCCAGGACT	5	-	147019198-147019247	5q32e	Homo sapiens janus kinase and microtubule interacting protein 2 (JAKMIP2), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]			KIAA0555; NECC1; JAMIP2	KIAA0555; NECC1; JAMIP2
Homo sapiens	RefSeq	NM_012467.2	ILMN_10715	TPSG1	NM_012467.2	NM_012467.2		25823	63079706	NM_012467.2	TPSG1	NP_036599.2	ILMN_1769219	0004590025	S	879	CTCTTCCTTCTGCTAGTCTCCTGTGTCCTGCTGGCCAAGTGCCTGCTGCA	16	-	1211828-1211877	16p13.3e	Homo sapiens tryptase gamma 1 (TPSG1), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10521469] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PRSS31; trpA; TMT	PRSS31; trpA; TMT
Homo sapiens	RefSeq	XM_001719673.1	ILMN_346778	LOC100131774	XM_001719673.1	XM_001719673.1		100131774	169168885	XM_001719673.1	LOC100131774	XP_001719725.1	ILMN_3289287	0000450709	M	763	CCTGGAGCGCTGGCGGTGGTCGGAGGTATTTCCTATATCTTCCTGTCTTT				6q23.2b	PREDICTED: Homo sapiens hypothetical LOC100131774 (LOC100131774), mRNA.					
Homo sapiens	RefSeq	XM_938827.1	ILMN_36195	LOC649757	XM_938827.1	XM_938827.1		649757	89047291	XM_938827.1	LOC649757	XP_943920.1	ILMN_1696720	0004150719	S	61	TTTCATATTGTTGGAGTATTCATGGTATCCCTGGAGCTTGCAGTTTTCTG					PREDICTED: Homo sapiens similar to Cytochrome c oxidase polypeptide VIc-2 (LOC649757), mRNA.					
Homo sapiens	RefSeq	XM_001717723.1	ILMN_343428	LOC100129778	XM_001717723.1	XM_001717723.1		100129778	169203184	XM_001717723.1	LOC100129778	XP_001717775.2	ILMN_3262761	0005560113	M	201	CAGAGGAGCCAATACTGATGACACCTTGATCTTAGACTTCCGGTCTCCAG				11q24.2a	PREDICTED: Homo sapiens hypothetical LOC100129778 (LOC100129778), mRNA.					
Homo sapiens	RefSeq	NM_017658.3	ILMN_22112	KLHL28	NM_017658.3	NM_017658.3		54813	118600986	NM_017658.3	KLHL28	NP_060128.2	ILMN_3251605	0003610358	S	4043	TGAAAGACTGTGGAAAATGATTTTAGGACGGGCGCAGTGGCTCACGCCTG	14	-	45395985-45396034	14q21.3a-q21.3b	Homo sapiens kelch-like 28 (Drosophila) (KLHL28), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ20081; BTBD5	FLJ20081
Homo sapiens	RefSeq	NM_017658.2	ILMN_22112	KLHL28	NM_017658.3	NM_017658.3		54813	118600986	NM_017658.3	KLHL28	NP_060128.2	ILMN_1693401	0007330575	S	1712	CCTTTATGTCGTCGGTGGTCACTCAGGGTCTTCCTATCTGAATACAGTGC	14	-	45398316-45398365	14q21.3a-q21.3b	Homo sapiens kelch-like 28 (Drosophila) (KLHL28), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ20081; BTBD5	FLJ20081
Homo sapiens	RefSeq	NM_147686.1	ILMN_13710	TRAF3IP2	NM_147686.1	NM_147686.1		10758	22538427	NM_147686.1	TRAF3IP2	NP_679211.1	ILMN_1694061	0004060279	I	141	CCTCAGCCGTTGATTCACTGCCCACAGGGAGATTTTGAGCAGAGGCTTCC	6	-	112033824-112033873	6q21h	Homo sapiens TRAF3 interacting protein 2 (TRAF3IP2), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10962033] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]		C6orf6; CIKS; C6orf5; MGC3581; C6orf4; DKFZP586G0522; ACT1	CIKS; C6orf5; MGC3581; DKFZP586G0522; C6orf6; C6orf4; ACT1
Homo sapiens	RefSeq	NM_147200.1	ILMN_13710	TRAF3IP2	NM_147686.1	NM_147686.1		10758	22538427	NM_147686.1	TRAF3IP2	NP_679211.1	ILMN_1701514	0007510719	A	2308	GTTCCTCCTGACAGTTTGATGTGTCCATTCTGGGCCTCTCAGTGCTTAGC	6	-	111986992-111987041	6q21h	Homo sapiens TRAF3 interacting protein 2 (TRAF3IP2), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10962033] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]		C6orf6; CIKS; C6orf5; MGC3581; C6orf4; DKFZP586G0522; ACT1	CIKS; C6orf5; MGC3581; DKFZP586G0522; C6orf6; C6orf4; ACT1
Homo sapiens	RefSeq	NM_012106.3	ILMN_28696	ARL2BP	NM_012106.3	NM_012106.3		23568	42794776	NM_012106.3	ARL2BP	NP_036238.1	ILMN_1755391	0002570523	S	1730	TTCTTCCTGTCAAAATCTCTCCTACCAAGATGGTGTTCCACTGTCCAGCC	16	+	55844676-55844725	16q13c	Homo sapiens ADP-ribosylation factor-like 2 binding protein (ARL2BP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10488091] [evidence TAS]	Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [pmid 10488091] [evidence TAS]	BART1	BART1
Homo sapiens	RefSeq	NM_002039.2	ILMN_27560	GAB1	NM_002039.2	NM_002039.2		2549	46370072	NM_002039.2	GAB1	NP_002030.2	ILMN_2405534	0004890307	A	2126	GGGAAATCCACACCACCACGTAAGCAAAAGAGCAGTGGCTCAGGCAGCAG	4	+	144606805-144606828:144609634-144609659	4q31.21c	Homo sapiens GRB2-associated binding protein 1 (GAB1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9356464] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15574420] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14560030] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10734310] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10913131] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11606067] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14665621] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10648629] [evidence EXP]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of an epidermal growth factor receptor binding to one of its physiological ligands [goid 7173] [pmid 8596638] [evidence TAS]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8596638] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 8596638] [evidence TAS]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8596638] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9658397] [evidence IPI]		
Homo sapiens	RefSeq	XM_001129257.2	ILMN_173076	LOC729078	XM_001129257.2	XM_001129257.2		729078	169216889	XM_001129257.2	LOC729078	XP_001129257.1	ILMN_3228662	0003990138	A	303	TATTTGTGTGTCACCACAAGCAGAATAAGACACAACATAAAAATCAGAAG	X	-	139126082-139126131	Xq27.1c	PREDICTED: Homo sapiens hypothetical LOC729078 (LOC729078), mRNA.					
Homo sapiens	RefSeq	XM_045421.5	ILMN_308676	C20ORF194	NM_001009984.1	NM_001009984.1		25943	149363694	NM_001009984.1	C20orf194	NP_001009984.1	ILMN_1689585	0005130167	I	6291	CTGAAGCCTGGACACTGGGCCCTTCAGGTCGCAAGAAAAAGTTCCCTCCT	20	-	3232295-3232344	20p13c-p13b	Homo sapiens chromosome 20 open reading frame 194 (C20orf194), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC141683; MGC117480; DKFZp434N061	
Homo sapiens	RefSeq	NM_001025374.1	ILMN_12937	MIIP	NM_021933.2	NM_021933.2		60672	70778868	NM_021933.2	MIIP	NP_068752.2	ILMN_1783843	0007160750	A	1232	TGTCCGGCACCAGCAGCCCTTTTCACCCGGCCTCACCAATGCAGATGCTG	1	+	12014019-12014047:12014366-12014386	1p36.22a	Homo sapiens migration and invasion inhibitory protein (MIIP), mRNA.				FLJ38609; FLJ12438	FLJ38609; FLJ12438
Homo sapiens	RefSeq	XM_933474.1	ILMN_40220	LOC653715	XM_933474.1	XM_933474.1		653715	89058939	XM_933474.1	LOC653715	XP_938567.1	ILMN_1689484	0000270626	S	132	GAGCCCTATGAGCAGTGGAACCTAGGCCTGCAGACAGCCTATTGTGGGAC	22	-	25237095-25237119:25238065-25238089		PREDICTED: Homo sapiens similar to tuftelin interacting protein 11 (LOC653715), mRNA.					
Homo sapiens	RefSeq	NM_004217.1	ILMN_24702	AURKB	NM_004217.2	NM_004217.2		9212	83776599	NM_004217.2	AURKB	NP_004208.2	ILMN_1684217	0006770026	S	893	CACAACGAGACCTATCGCCGCATCGTCAAGGTGGACCTAAAGTTCCCCGC	17	-	8108342-8108362:8108534-8108562	17p13.1c	Homo sapiens aurora kinase B (AURKB), mRNA.	The region of a chromosome that includes the centromere and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome [goid 775] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process by which a methyl group is covalently attached to a molecule [goid 32259] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291752] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12689593] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ARK2; STK5; AurB; IPL1; AIM1; AIK2; STK12; AIM-1	ARK2; STK5; AurB; IPL1; AIM1; AIK2; STK12; AIM-1
Homo sapiens	RefSeq	NM_078469.1	ILMN_21158	BCCIP	NM_078469.1	NM_078469.1		56647	17402872	NM_078469.1	BCCIP	NP_510869.1	ILMN_1758090	0005270156	I	2017	ATGGGGCACTGGGTAGAAAACACAAGTGAGAAACCCTAGATGGGCACTGC	10	+	127521044-127521093	10q26.2a	Homo sapiens BRCA2 and CDKN1A interacting protein (BCCIP), transcript variant C, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10878006] [evidence TAS]	Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 10878006] [evidence TAS]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TOK-1	TOK-1
Homo sapiens	RefSeq	NM_145914.2	ILMN_2862	ZSCAN21	NM_145914.2	NM_145914.2		7589	37537685	NM_145914.2	ZSCAN21	NP_666019.1	ILMN_1789410	0000940576	S	1663	GAGTTTGTATCACTCAACATCAGGGGATGCCTGAGGAGTGCGAGCTCCAC	7	+	99022457-99022506	7q22.1b	Homo sapiens zinc finger and SCAN domain containing 21 (ZSCAN21), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	NY-REN-21; DKFZp686H10254; Zipro1; ZSCAN21; DKFZp434L134; ZNF38	NY-REN-21; DKFZp686H10254; Zipro1; ZSCAN21; DKFZp434L134; ZNF38
Homo sapiens	RefSeq	XM_001718527.1	ILMN_335155	LOC100129837	XM_001718527.1	XM_001718527.1		100129837	169214239	XM_001718527.1	LOC100129837	XP_001718579.1	ILMN_3176828	0004490170	A	934	CAGTGCAACCTCAAACTCCCAGGTTCAAGCGATCTTCCATCCTGACCTCC				19p13.2a	PREDICTED: Homo sapiens similar to ZNF124 protein (LOC100129837), mRNA.					
Homo sapiens	RefSeq	NM_004542.1	ILMN_6292	NDUFA3	NM_004542.2	NM_004542.2		4696	142351904	NM_004542.2	NDUFA3	NP_004533.1	ILMN_1784641	0000050240	S	19	GAGACAAAGATGGCTGCGAGAGTCGGCGCCTTCCTCAAGAATGCCTGGGA	19	+	59297990-59297998:59297999-59298008:59298234-59298264	19q13.42a	Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa (NDUFA3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	B9	B9
Homo sapiens	RefSeq	XM_001716329.1	ILMN_343684	LOC100131579	XM_001716329.1	XM_001716329.1		100131579	169215729	XM_001716329.1	LOC100131579	XP_001716381.1	ILMN_3209330	0004070093	A	405	CAGCATCCATGATGCAGCCATCGACGGTATAGCTGCCCCCCACCACAGCA				22q11.21e	PREDICTED: Homo sapiens hypothetical protein LOC100131579 (LOC100131579), mRNA.					
Homo sapiens	RefSeq	NM_002510.2	ILMN_25675	GPNMB	NM_002510.2	NM_002510.2		10457	52694750	NM_002510.2	GPNMB	NP_002501.1	ILMN_2407389	0001570154	A	1997	GATGGGGAGAGGGATTATACTGCAGGCAGCTTCAGCCATGTTGTGAAACT	7	+	23280521-23280570	7p15.3b	Homo sapiens glycoprotein (transmembrane) nmb (GPNMB), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 7814155] [evidence TAS]	Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]	NMB; HGFIN	NMB; HGFIN
Homo sapiens	RefSeq	NM_002687.2	ILMN_24088	PNN	NM_002687.3	NM_002687.3		5411	133908618	NM_002687.3	PNN	NP_002678.2	ILMN_1721703	0007150132	S	2145	CCCGGTCCGACAGAAAGAGGTCTATATCAGAGAGTAGTCGATCAGGCAAA	14	+	38720712-38720761	14q21.1b	Homo sapiens pinin, desmosome associated protein (PNN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 10809736] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8922384] [evidence TAS]; A specialized region of connection between two cells including but not limited to gap junctions, desmosomes, and tight junctions, but excluding direct cytoplasmic junctions such as ring canals [goid 5911] [pmid 8922384] [evidence TAS]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8922384] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 8922384] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	SDK3; DRS; memA; pinin	SDK3; DRS; memA; pinin
Homo sapiens	RefSeq	NM_015282.1	ILMN_161887	CLASP1	NM_015282.1	NM_015282.1		23332	31563536	NM_015282.1	CLASP1	NP_056097.1	ILMN_1700507	0005290215	S	7836	GTTATGTTGGCACTGTGTTCACACGCATGGTCCCCACACCCCCAGGTTGG	2	-	121812028-121812077	2q14.2e-q14.3a	Homo sapiens cytoplasmic linker associated protein 1 (CLASP1), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15631994] [evidence IDA]; Any of the spindle microtubules that attach to the kinetochores of chromosomes by their plus ends, and maneuver the chromosomes during mitotic or meiotic chromosome segregation [goid 5828] [pmid 12837247] [evidence TAS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any microtubule in the cytoplasm of a cell [goid 5881] [pmid 11290329] [evidence IDA]; The portion of the microtubule cytoskeleton that lies just beneath the plasma membrane [goid 30981] [pmid 12837247] [evidence IDA]; An amorphous structure surrounding the core of the centrosome, from which microtubules are nucleated; contains gamma-tubulin [goid 31592] [pmid 16914514] [evidence IDA]	A process that results in a parallel arrangement of microtubules [goid 1578] [pmid 12837247] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [pmid 16866869] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [pmid 15631994] [evidence IGI]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 15928712] [evidence NAS]; The cell cycle process where a cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place [goid 10458] [pmid 16866869] [evidence IMP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17342765] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15631994] [evidence IPI]; Interacting selectively with a kinetochore, a proteinaceous structure on a condensed chromosome, beside the centromere, to which the spindle fibers are attached [goid 43515] [pmid 12837247] [evidence IMP]; Interacting selectively with the plus end of a microtubule [goid 51010] [pmid 12837247] [evidence IDA]	FLJ33821; FLJ41222; MAST1; KIAA0622; MGC131895; DKFZp686H2039; DKFZp686D1968	FLJ33821; FLJ41222; MAST1; KIAA0622; MGC131895; DKFZp686H2039; DKFZp686D1968
Homo sapiens	RefSeq	NM_012206.1	ILMN_309591	LOC100101266	NR_003603.1	NR_003603.1		100101266	150378494	NR_003603.1	LOC100101266		ILMN_1691662	0006450193	S	1043	GACCCAGTGGTGCTCTTTGAGAGTTTACGCCCATGACTGCAGAAGACTGA	19	-	24345157-24345206	19p12b	Homo sapiens hepatitis A virus cellular receptor 1 pseudogene (LOC100101266), non-coding RNA.					TIM1; KIM1; HAVCR; KIM-1; TIMD1; TIM-1; HAVCR-1
Homo sapiens	RefSeq	XM_929881.1	ILMN_309591	LOC100101266	NR_003603.1	NR_003603.1		100101266	150378494	NR_003603.1	LOC100101266		ILMN_1658405	0000940017	S	566	ATGGTCTCTACCTTTGTTCCTCCAACGCCATTGCCCACGCAGAACCATCA	19	-	24345634-24345683	19p12b	Homo sapiens hepatitis A virus cellular receptor 1 pseudogene (LOC100101266), non-coding RNA.					
Homo sapiens	RefSeq	NM_001001666.1	ILMN_4200	ANO7	NM_001001666.3	NM_001001666.3		50636	145207978	NM_001001666.3	ANO7	NP_001001666.1	ILMN_1732948	0006280746	I	725	TCCGTGTGGCTAGGGAGCTGCTGTCCAGAGGCGGAGGTAAACATTGATCC	2	+	241784087-241784136	2q37.3f	Homo sapiens anoctamin 7 (ANO7), transcript variant NGEP-S, mRNA.				PCANAP5; IPCA5; D-TMPP; IPCA-5; PCANAP5L; NGEP	PCANAP5; D-TMPP; IPCA-5; PCANAP5L; NGEP
Homo sapiens	RefSeq	NM_002774.3	ILMN_7428	KLK6	NM_001012964.1	NM_001012964.1		5653	61744423	NM_001012964.1	KLK6	NP_001012982.1	ILMN_1780255	0002970154	A	1326	CCCAGCTCCGCTGCTTACTGTCGGTGTCCCCTTGGGATGTACCTTTCTTC	19	-	56153850-56153899	19q13.33d	Homo sapiens kallikrein-related peptidase 6 (KLK6), transcript variant B, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11668196] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11668196] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 12589961] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism [goid 9611] [pmid 12016211] [evidence NAS]; Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein [goid 16540] [pmid 12878203] [evidence NAS]; The proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix, usually carried out by proteases secreted by nearby cells [goid 30574] [pmid 12878203] [evidence NAS]; The regrowth of lost or destroyed tissues [goid 42246] [pmid 12878203] [evidence NAS]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [pmid 11668196] [evidence NAS]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 11668196] [evidence NAS]; The chemical reactions and pathways involving amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42982] [pmid 12709365] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features [goid 45595] [pmid 11668196] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 12878203] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12878203] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12709365] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12878203] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	PRSS18; Klk7; hK6; SP59; Bssp; MGC9355; NEUROSIN; ZYME; PRSS9	PRSS18; Klk7; hK6; SP59; Bssp; MGC9355; NEUROSIN; ZYME; PRSS9
Homo sapiens	RefSeq	XM_935761.1	ILMN_31557	LOC641987	XM_935761.1	XM_935761.1		641987	89026903	XM_935761.1	LOC641987	XP_940854.1	ILMN_1695858	0000010301	S	41	AGGCCTCTGGTGGTGTCAGCATGTTTGTGTGGAGGAATGTGGAACCTTGC					PREDICTED: Homo sapiens similar to capicua homolog (LOC641987), mRNA.					
Homo sapiens	RefSeq	XM_001717180.1	ILMN_348150	LOC100130701	XM_001717180.1	XM_001717180.1		100130701	169166062	XM_001717180.1	LOC100130701	XP_001717232.1	ILMN_3268246	0005870161	M	982	CTTGATCCTGGAGCTGCTTCCCTGGTGTCCAATGCAAATGGCCTCTGTGG				3q13.33b	PREDICTED: Homo sapiens similar to hCG1657343 (LOC100130701), mRNA.					
Homo sapiens	RefSeq	NR_024457.1	ILMN_371724	LOC100190940	NR_024457.1	NR_024457.1		100190940	213385263	NR_024457.1	LOC100190940		ILMN_3247177	0003130427	S	3303	TGAAGATTCACCTGGAGGCAGCCTTTGCTGCAGGGACACCCAGATCTCAC	12	-	130518174-130518223		Homo sapiens hypothetical LOC100190940 (LOC100190940), non-coding RNA.					
Homo sapiens	RefSeq	XM_942067.1	ILMN_31182	LOC652563	XM_942067.1	XM_942067.1		652563	89071741	XM_942067.1	LOC652563	XP_947160.1	ILMN_1747311	0004880020	S	467	AGGTTCAGAGACGTGAAGCCCGCTACCCCACACGACCTGTCAGCCCAGAA					PREDICTED: Homo sapiens similar to espin (LOC652563), mRNA.					
Homo sapiens	RefSeq	XM_001715882.1	ILMN_335882	LOC100132390	XM_001715882.1	XM_001715882.1		100132390	169206586	XM_001715882.1	LOC100132390	XP_001715934.1	ILMN_3200212	0004010600	A	405	GGCTCTGGGCCAACCCTGACTTATCTCTCACCGGCCCATGGTTTCCAGAA				13q33.1b	PREDICTED: Homo sapiens hypothetical protein LOC100132390 (LOC100132390), mRNA.					
Homo sapiens	RefSeq	NM_001080146.1	ILMN_181525	CT47A1	NM_001080146.1	NM_001080146.1		728096	121949801	NM_001080146.1	CT47A1	NP_001073615.1	ILMN_2095078	0007050020	S	1	ACCAGAATCTTTCCCAACTTGTCTAAGTCCTCTCAGGCCAGCCTTGGTGG	X	-	120119588-120119637	Xq24e	Homo sapiens cancer/testis antigen family 47, member A1 (CT47A1), mRNA.					
Homo sapiens	RefSeq	XM_926669.1	ILMN_181525	CT47A1	NM_001080146.1	NM_001080146.1		728096	121949801	NM_001080146.1	CT47A1	NP_001073615.1	ILMN_1673271	0005310128	S	59	TAGGATTCGCTCCCTGCCCTTCCCATCTTAGGGTGTCGTCTGAGACAGAC	X	-	120119530-120119579	Xq24e	Homo sapiens cancer/testis antigen family 47, member A1 (CT47A1), mRNA.					
Homo sapiens	RefSeq	NM_021973.2	ILMN_43811	HAND2	NM_021973.2	NM_021973.2		9464	88999597	NM_021973.2	HAND2	NP_068808.1	ILMN_2064902	0004640563	S	1624	AGTGAGCAGGGGCCAAGGCGCCAGATGCAGACCCAGGACTCCGGAAAAGC	4	-	174684921-174684970	4q34.1c	Homo sapiens heart and neural crest derivatives expressed 2 (HAND2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the adult heart over time, from its formation to the mature structure [goid 7512] [evidence IEA]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9878849] [evidence TAS]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9500550] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence IEA]	MGC125304; Thing2; Hed; dHand; MGC125303; DHAND2; FLJ16260	MGC125304; Thing2; Hed; dHand; MGC125303; DHAND2; FLJ16260
Homo sapiens	RefSeq	XM_001127570.2	ILMN_171403	LOC728500	XM_001127570.2	XM_001127570.2		728500	169169950	XM_001127570.2	LOC728500	XP_001127570.1	ILMN_3227955	0000990403	A	246	GAGGCGGCTCAGGGCCAGGGCCTTAGGGCCAGGGGCGTCCCAGCTTTCAC	7	-	57015841-57015890	7p11.2a	PREDICTED: Homo sapiens similar to solute carrier family 29 (nucleoside transporters), member 4 (LOC728500), mRNA.					
Homo sapiens	RefSeq	NM_032599.1	ILMN_15546	FAM71F1	NM_032599.2	NM_032599.2		84691	85797668	NM_032599.2	FAM71F1	NP_115988.1	ILMN_1659464	0000840035	S	1486	GGTAGACGAGATAAGGAGGACAAGAGAAGGGACACACCCCTGAGAGATGC	7	+	128158801-128158850	7q32.1a	Homo sapiens family with sequence similarity 71, member F1 (FAM71F1), mRNA.				NYD-SP18; FAM137A	
Homo sapiens	RefSeq	NM_016131.2	ILMN_21971	RAB10	NM_016131.3	NM_016131.3		10890	142365829	NM_016131.3	RAB10	NP_057215.2	ILMN_1793433	0005860279	S	3348	AGGGCTTTGCCCCTTTTCTGTAAGTCTCTTGGGATCCTGTGTAGAAGCTG	2	+	26213635-26213684	2p23.3b	Homo sapiens RAB10, member RAS oncogene family (RAB10), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]		
Homo sapiens	RefSeq	NM_016464.2	ILMN_5258	TMEM138	NM_016464.3	NM_016464.3		51524	142384520	NM_016464.3	TMEM138	NP_057548.1	ILMN_1664761	0006290598	S	996	GGACAGAAGGACCTCCCAGCCCCCAAAGGATCTCCCAGTGACCAAAGGAT	11	+	60893088-60893137	11q12.2b	Homo sapiens transmembrane protein 138 (TMEM138), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			HSPC196	HSPC196
Homo sapiens	RefSeq	XM_935577.1	ILMN_33718	LOC647034	XM_930023.1	XM_930023.1		647034	89025488	XM_930023.1	LOC647034	XP_935116.1	ILMN_1750592	0006580414	S	5	AGGAGCAGGCTGACCAAGATGAATCCTCCCCATGTACTGCCATGTTGACT	7	+	131000883-131000932	7q32.3b	PREDICTED: Homo sapiens similar to ribosomal protein S14 (LOC647034), mRNA.					
Homo sapiens	RefSeq	NM_173681.3	ILMN_167474	ATG9B	NM_173681.4	NM_173681.4		285973	109452598	NM_173681.4	ATG9B	NP_775952.3	ILMN_1734655	0002570204	S	4095	AGTCAACACCTACTATGTACCAGGCACCAGGAAGCCAGAAGCTCAGGGCC	7	-	150340661-150340710	7q36.1d	Homo sapiens ATG9 autophagy related 9 homolog B (S. cerevisiae) (ATG9B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A double-membrane-bounded vesicle in which endogenous cellular material is sequestered; known as autophagosome in yeast [goid 5776] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm [goid 45] [pmid 15755735] [evidence IDA]; The process by which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation [goid 6914] [evidence IEA]		NOS3AS; SONE; APG9L2	NOS3AS; APG9L2; SONE
Homo sapiens	RefSeq	NM_181426.1	ILMN_339228	CCDC39	NM_181426.1	NM_181426.1		339829	157785667	NM_181426.1	CCDC39	NP_852091.1	ILMN_3239045	0000150121	S	2831	GTACTGGAGCTTAAATTCCCGGCCTCCTCTTCACTAGTAGGCAGCCCTTC	3	-	181815463-181815512	3q26.33b	Homo sapiens coiled-coil domain containing 39 (CCDC39), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 11256614] [evidence IDA]			DKFZp434A128	DKFZp434A128
Homo sapiens	RefSeq	Hs.322431	ILMN_174346	NEUROD2	NM_006160.3	NM_006160.3		4761	98986460	NM_006160.3	NEUROD2	NP_006151.3	ILMN_1908654	0001980722	S	2867	GCATTTTTGCATCGTGTATTTGGATGCCTGATCCCCTGCCTCCGGTGGGC	17	-	37760136-37760185	17q12c	Homo sapiens neurogenic differentiation 2 (NEUROD2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	An acute behavioral change resulting from a perceived external threat [goid 1662] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 8816493] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8816493] [evidence TAS]; Learning by associating a stimulus (the cause) with a particular outcome (the effect) [goid 8306] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8816493] [evidence TAS]	NDRF; MGC26304	
Homo sapiens	RefSeq	NM_001198.2	ILMN_8384	PRDM1	NM_001198.2	NM_001198.2		639	33946272	NM_001198.2	PRDM1	NP_001189.1	ILMN_2414165	0003840113	A	4547	ATGTGGTCACACCCAAGTCACAGAAATAAAAAACTGACTTTACCGCTGCA	6	+	106663889-106663938	6q21c	Homo sapiens PR domain containing 1, with ZNF domain (PRDM1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 1851123] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IEA]; Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1893] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1851123] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC118922; BLIMP1; PRDI-BF1; MGC118925; MGC118924; MGC118923	MGC118922; BLIMP1; PRDI-BF1; MGC118925; MGC118924; MGC118923
Homo sapiens	RefSeq	NM_001198.2	ILMN_8384	PRDM1	NM_001198.2	NM_001198.2		639	33946272	NM_001198.2	PRDM1	NP_001189.1	ILMN_2298159	0005260392	I	416	TTGTGAACGACCACCCCTGGGATTCTGGTGCTGATGGCGGTACTTCGGTT	6	+	106642908-106642957	6q21c	Homo sapiens PR domain containing 1, with ZNF domain (PRDM1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 1851123] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IEA]; Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1893] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1851123] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC118922; BLIMP1; PRDI-BF1; MGC118925; MGC118924; MGC118923	MGC118922; BLIMP1; PRDI-BF1; MGC118925; MGC118924; MGC118923
Homo sapiens	RefSeq	NM_001198.2	ILMN_8384	PRDM1	NM_001198.2	NM_001198.2		639	33946272	NM_001198.2	PRDM1	NP_001189.1	ILMN_1655077	0006220288	A	4952	TCTCTTTTCTGCCTCTTACATGTGAATGTTGAGCCCACAATCAACAGTGG	6	+	106664294-106664343	6q21c	Homo sapiens PR domain containing 1, with ZNF domain (PRDM1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 1851123] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The embryonically driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1892] [evidence IEA]; Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1893] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1851123] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC118922; BLIMP1; PRDI-BF1; MGC118925; MGC118924; MGC118923	MGC118922; BLIMP1; PRDI-BF1; MGC118925; MGC118924; MGC118923
Homo sapiens	RefSeq	NM_003137.3	ILMN_19425	SRPK1	NM_003137.3	NM_003137.3		6732	47419935	NM_003137.3	SRPK1	NP_003128.3	ILMN_1798804	0007050056	S	4153	GGCAGCTGTAGATCTTGATCTTCCAGGTACCCCATGTACCTTTATTGAGC	6	-	35908947-35908996	6p21.31b	Homo sapiens SFRS protein kinase 1 (SRPK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11509566] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11509566] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 11509566] [evidence IDA]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 15034300] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 11509566] [evidence IDA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 8208298] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of mRNA processing, those processes involved in the conversion of a primary mRNA transcript into a mature mRNA prior to its translation into polypeptide [goid 50684] [pmid 8208298] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 11509566] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11509566] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11509566] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10196197] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11509566] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SFRSK1	SFRSK1
Homo sapiens	RefSeq	NM_002236.4	ILMN_823	KCNF1	NM_002236.4	NM_002236.4		3754	27436998	NM_002236.4	KCNF1	NP_002227.2	ILMN_1671392	0004610161	S	2230	TGGCACGAGAGCCCACGCCCGCTTCTGTATCTCCCTCAATAAAGCCTCCT	2	+	10971743-10971792	2p25.1c	Homo sapiens potassium voltage-gated channel, subfamily F, member 1 (KCNF1), mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 9434767] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	kH1; IK8; KCNF; KV5.1; MGC33316	kH1; IK8; KCNF; KV5.1; MGC33316
Homo sapiens	Unigene	Hs.578117	ILMN_130298	HS.578117	Hs.578117		Hs.578117		19736194	BQ011293			ILMN_1892996	0003780482	S	448	GAGTCTTCTACCAGGTGGGCAGCTGTGTGTCTGGAAGTGGTGACAGGTGG	14	+	97208780-97208829		UI-1-BC1p-ary-b-02-0-UI.s1 NCI_CGAP_Pl3 Homo sapiens cDNA clone UI-1-BC1p-ary-b-02-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_199417.1	ILMN_162485	C3ORF60	NM_199417.1	NM_199417.1		25915	41327788	NM_199417.1	C3orf60	NP_955449.1	ILMN_1672336	0003460753	I	585	AGCTTGGACCCCGCGCCCTCGACCATCCAGCCCCCTAGGGCCGGCGACTG	3	+	49034662-49034711	3p21.31d	Homo sapiens chromosome 3 open reading frame 60 (C3orf60), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			E3-3; 2P1; MGC10527; DKFZP564J0123	E3-3; MGC10527; 2P1; DKFZP564J0123
Homo sapiens	RefSeq	NM_199073.1	ILMN_162485	C3ORF60	NM_199417.1	NM_199417.1		25915	41327788	NM_199417.1	C3orf60	NP_955449.1	ILMN_1691557	0004070576	A	1326	GGAGCTGATGGCTCACTGGGCTCTTGGAGGGGAATGTGAAGAAACCAAGG	3	+	49035752-49035801	3p21.31d	Homo sapiens chromosome 3 open reading frame 60 (C3orf60), transcript variant 5, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			E3-3; 2P1; MGC10527; DKFZP564J0123	E3-3; MGC10527; 2P1; DKFZP564J0123
Homo sapiens	RefSeq	XM_001724111.1	ILMN_340502	LOC100130311	XM_001724111.1	XM_001724111.1		100130311	169211218	XM_001724111.1	LOC100130311	XP_001724163.1	ILMN_3183069	0001770347	A	2946	CTCAGCGGTTGGGGCCAGAAGTGGGATTTTTGGCTTAAGATGAGGGTGGG				17p13.2b	PREDICTED: Homo sapiens hypothetical protein LOC100130311 (LOC100130311), mRNA.					
Homo sapiens	RefSeq	XM_001713609.1	ILMN_334996	TBC1D3I	XM_001713609.1	XM_001713609.1		643947	169211144	XM_001713609.1	TBC1D3I	XP_001713661.1	ILMN_3235694	0005670537	S	1681	ACTGATTCCGACCAGGGCACCCCCTTCAGAGCTAGGGACGAACAGCAGTA	17	+	152396-152445		PREDICTED: Homo sapiens TBC1 domain family, member 3I (TBC1D3I), mRNA.					
Homo sapiens	RefSeq	NM_153186.3	ILMN_4666	KANK1	NM_015158.2	NM_015158.2		23189	64464725	NM_015158.2	KANK1	NP_055973.2	ILMN_1773427	0007000397	A	4647	GGAAGTCGAGATGACTTTGATCATTGGTAACTTGGGCCTGGGCCAGACAA	9	+	712445-712494	9p24.3b	Homo sapiens KN motif and ankyrin repeat domains 1 (KANK1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]		ANKRD15; KANK; KIAA0172; DKFZp451G231; MGC43128	ANKRD15; KANK; KIAA0172; DKFZp451G231; MGC43128
Homo sapiens	RefSeq	NM_015158.2	ILMN_4666	KANK1	NM_015158.2	NM_015158.2		23189	64464725	NM_015158.2	KANK1	NP_055973.2	ILMN_1706031	0000610202	I	119	ATTGGACTCAAGCCAGCATGGCTCACACCACAAAGGTTAACGGCAGTGCC	9	+	666904-666953	9p24.3b	Homo sapiens KN motif and ankyrin repeat domains 1 (KANK1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]		ANKRD15; KANK; KIAA0172; DKFZp451G231; MGC43128	ANKRD15; KANK; KIAA0172; DKFZp451G231; MGC43128
Homo sapiens	RefSeq	NM_172027.1	ILMN_29924	ABTB1	NM_032548.2	NM_032548.2		80325	25777622	NM_032548.2	ABTB1	NP_115937.1	ILMN_1802096	0002970044	A	1924	CCATTCAGGAAGGGCTGGGGGAGTGTGTGTGGCAATAAAGCTTGAAGGCA	3	+	127399706-127399755	3q21.3b	Homo sapiens ankyrin repeat and BTB (POZ) domain containing 1 (ABTB1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BPOZ; PP2259; EF1ABP; MGC20585	BPOZ; PP2259; EF1ABP; MGC20585
Homo sapiens	RefSeq	NM_018382.1	ILMN_15574	FLJ11292	NM_018382.1	NM_018382.1		55338	8922980	NM_018382.1	FLJ11292	NP_060852.1	ILMN_1695562	0004480671	S	1455	CATCAACAAAAAGGACATCCACACAAAAACCCCATCCGAAGGTCACCAGC	5	-	86548622-86548671		Homo sapiens hypothetical protein FLJ11292 (FLJ11292), mRNA.					
Homo sapiens	RefSeq	XM_001129946.2	ILMN_164235	LOC730396	XM_001129946.2	XM_001129946.2		730396	169169180	XM_001129946.2	LOC730396	XP_001129946.1	ILMN_3241391	0000770598	S	105	GAGGACGCCATGGGCTCCACATCCACTTGGATTCCAGGAAAGGCGGTACA	6	+	29055548-29055587:29055783-29055792		PREDICTED: Homo sapiens hypothetical protein LOC730396 (LOC730396), mRNA.					
Homo sapiens	RefSeq	NM_032728.2	ILMN_25638	PPAPDC3	NM_032728.2	NM_032728.2		84814	34147435	NM_032728.2	PPAPDC3	NP_116117.2	ILMN_1690839	0005260278	S	1789	AACCCCCAAGGAATTATTGGTTCCTCAAGTGCGTTTTGGGAGCTGCTGCC	9	+	133174207-133174256	9q34.13a	Homo sapiens phosphatidic acid phosphatase type 2 domain containing 3 (PPAPDC3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	NET39; C9orf67; FLJ14662; RP11-643E14.1; MGC12921; KIAA0515	NET39; C9orf67; FLJ14662; RP11-643E14.1; MGC12921; KIAA0515
Homo sapiens	RefSeq	XM_001127575.2	ILMN_178681	LOC728503	XM_001127575.2	XM_001127575.2		728503	169204155	XM_001127575.2	LOC728503	XP_001127575.2	ILMN_3299923	0004050333	M	1524	TGGAACTTGCCAAGGTTCCAGGGGTTGAGCCCACTCCATCCTGTCCAAAG	12	+	50530348-50530361:50532745-50532758:50532759-50532780	12q13.13c	PREDICTED: Homo sapiens hypothetical LOC728503 (LOC728503), mRNA.					
Homo sapiens	RefSeq	NM_001001928.2	ILMN_7270	PPARA	NM_001001928.2	NM_001001928.2		5465	61744437	NM_001001928.2	PPARA	NP_001001928.1	ILMN_2362847	0002470008	A	9437	GTTGACAGAAACACACGCGAGAATGAGGCAGATCCCAGAGCAAGGACTGG	22	+	45017789-45017838	22q13.31d	Homo sapiens peroxisome proliferator-activated receptor alpha (PPARA), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16271724] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9792666] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7684926] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IEA]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [pmid 16271724] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation [goid 32000] [pmid 16271724] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16554032] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12039952] [evidence IPI]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 9113987] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PPAR; hPPAR; MGC2452; NR1C1; MGC2237	PPAR; hPPAR; MGC2452; NR1C1; MGC2237
Homo sapiens	RefSeq	XM_926186.1	ILMN_7270	PPARA	NM_001001928.2	NM_001001928.2		5465	61744437	NM_001001928.2	PPARA	NP_001001928.1	ILMN_1659346	0006510093	S	5513	ACCGTGAGAAGTCAACAACTTAGCCACCACTTCCCCGCAATGGACCATGT	22	+	45013865-45013914	22q13.31d	Homo sapiens peroxisome proliferator-activated receptor alpha (PPARA), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16271724] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9792666] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7684926] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IEA]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [pmid 16271724] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation [goid 32000] [pmid 16271724] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16554032] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12039952] [evidence IPI]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 9113987] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PPAR; hPPAR; MGC2452; NR1C1; MGC2237	
Homo sapiens	RefSeq	NM_001001930.2	ILMN_7270	PPARA	NM_001001928.2	NM_001001928.2		5465	61744437	NM_001001928.2	PPARA	NP_001001928.1	ILMN_1700488	0000870441	A	387	ACGGACACGCTTTCACCAGCTTCGAGCCCCTCCTCGGTGACTTATCCTGT	22	+	44973149-44973152:44989734-44989779	22q13.31d	Homo sapiens peroxisome proliferator-activated receptor alpha (PPARA), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16271724] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9792666] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7684926] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [evidence IEA]; The directed movement of fatty acids into, out of, within or between cells. Fatty acids are aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 15908] [pmid 16271724] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving fatty acids [goid 19217] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation [goid 32000] [pmid 16271724] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16554032] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12039952] [evidence IPI]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 9113987] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PPAR; hPPAR; MGC2452; NR1C1; MGC2237	PPAR; hPPAR; MGC2452; NR1C1; MGC2237
Homo sapiens	RefSeq	NM_005946.2	ILMN_1797	MT1A	NM_005946.2	NM_005946.2		4489	71274112	NM_005946.2	MT1A	NP_005937.2	ILMN_1691156	0006200402	S	170	TGCTGCTCCTGCTGCCCCATGAGCTGTGCCAAGTGTGCCCAGGGCTGCAT	16	+	55231274-55231323	16q13b	Homo sapiens metallothionein 1A (MT1A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Interacting selectively with cadmium (Cd) ions [goid 46870] [evidence NAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MTC; MT1; MGC32848; MT1S	MTC; MT1; MGC32848; MT1S
Homo sapiens	RefSeq	NM_003675.2	ILMN_181098	PRPF18	NM_003675.3	NM_003675.3		8559	91208421	NM_003675.3	PRPF18	NP_003666.1	ILMN_1807243	0005860327	S	1216	GGGAAGCAGGCTGTGGACTTCTGGAATTACCAACAGGAATGAGGAAAGAA	10	+	13669064-13669092:13669093-13669113	10p13d	Homo sapiens PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) (PRPF18), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9000057] [evidence TAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9000057] [evidence TAS]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [pmid 9000057] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9000057] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		PRP18; FLJ10210; hPrp18	PRP18; FLJ10210; hPrp18
Homo sapiens	RefSeq	NM_002903.2	ILMN_1119	RCVRN	NM_002903.2	NM_002903.2		5957	56550117	NM_002903.2	RCVRN	NP_002894.1	ILMN_1736453	0002760678	S	1094	GGAGTCCTAAGTGTCACCCCGCTGTAAGCTCCTTTGTGGAGTGCTGGGTA	17	-	9801058-9801107	17p13.1b	Homo sapiens recoverin (RCVRN), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1672047] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 1672047] [evidence TAS]; The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; Any process that modulates the frequency, rate or extent of the directed movement of calcium ions into, out of, within or between cells [goid 51924] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 1672047] [evidence TAS];  [goid 8048] [pmid 1672047] [evidence TAS]	RCV1	RCV1
Homo sapiens	RefSeq	XM_928169.1	ILMN_36622	LOC645139	XM_928169.2	XM_928169.2		645139	113426667	XM_928169.2	LOC645139	XP_933262.1	ILMN_1780559	0005860364	S	67	GCACACCTGGGGTCGTCTAGGGTCATGGACCTGGCCACAGAGCAGAAACT	17	+	18489860-18489909	17p11.2f	PREDICTED: Homo sapiens hypothetical LOC645139 (LOC645139), mRNA.					
Homo sapiens	RefSeq	NM_004964.2	ILMN_12992	HDAC1	NM_004964.2	NM_004964.2		3065	13128859	NM_004964.2	HDAC1	NP_004955.2	ILMN_1727458	0003140056	S	1933	TTTCGTACCTTCCCACTGGCCTCAAGTGAGCCAAGAAACACTGCCTGCCC	1	+	32571653-32571702	1p35.1b	Homo sapiens histone deacetylase 1 (HDAC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A protein complex that possesses histone deacetylase activity [goid 118] [pmid 12711221] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10846170] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12711221] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12711221] [evidence TAS]	The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10777477] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [pmid 12711221] [evidence TAS]; The modification of histones by removal of acetyl groups [goid 16575] [evidence IEA]	Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8646880] [evidence TAS]; Catalysis of the hydrolysis of acetyl groups from histones, proteins complexed to DNA in chromatin and chromosomes [goid 4407] [pmid 12711221] [evidence TAS]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 15509593] [evidence IPI]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 12711221] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 11062478] [evidence IPI]; Interacting selectively with any enzyme [goid 19899] [pmid 11136718] [evidence IPI]; Interacting selectively with any enzyme [goid 19899] [pmid 11062478] [evidence IPI]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 9150135] [evidence IPI]	GON-10; DKFZp686H12203; HD1; RPD3; RPD3L1	GON-10; DKFZp686H12203; HD1; RPD3; RPD3L1
Homo sapiens	RefSeq	NM_018994.1	ILMN_17967	FBXO42	NM_018994.1	NM_018994.1		54455	62955043	NM_018994.1	FBXO42	NP_061867.1	ILMN_1756874	0006100551	S	2796	GTTGCAAAGGTGGAGGGTTTTAGACTCTCATGCTTCAGGTGCTGTCGGGG	1	-	16576689-16576738	1p36.13f	Homo sapiens F-box protein 42 (FBXO42), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		Fbx42; KIAA1332	Fbx42; KIAA1332
Homo sapiens	RefSeq	XM_943713.1	ILMN_32303	LOC649442	XM_943713.1	XM_943713.1		649442	88945884	XM_943713.1	LOC649442	XP_948806.1	ILMN_1786068	0003400047	S	534	TTCTGGCGAAGCCAAGGGTTCGAAGCCCGCCGGGCGGATAGCACCTGTTC					PREDICTED: Homo sapiens hypothetical protein LOC649442 (LOC649442), mRNA.					
Homo sapiens	RefSeq	NM_004653.3	ILMN_29791	JARID1D	NM_004653.3	NM_004653.3		8284	56243542	NM_004653.3	JARID1D	NP_004644.2	ILMN_1685690	0005870739	S	5180	ATCTTGAGGAAGCCCAAGTGCGTACCTTTATTTTTGCCCCCACCACCCTC	Y	-	20326946-20326995	Yq11.222b	Homo sapiens jumonji, AT rich interactive domain 1D (JARID1D), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence NAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17320160] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	SMCY; KIAA0234; KDM5D; HYA; HY	SMCY; KIAA0234; KDM5D; HYA; HY
Homo sapiens	RefSeq	NM_207327.4	ILMN_11708	C22ORF40	NM_207327.4	NM_207327.4		150383	57232757	NM_207327.4	C22orf40	NP_997210.3	ILMN_2325112	0003370440	A	791	CGGGGCCATGGTGCACTGTAGGTGGCTGCAATGGTCTCTCTGTAAGGAAA	22	-	46640561-46640610	22q13.31d	Homo sapiens chromosome 22 open reading frame 40 (C22orf40), mRNA.					
Homo sapiens	RefSeq	NM_001008917.1	ILMN_11708	C22ORF40	NM_207327.4	NM_207327.4		150383	57232757	NM_207327.4	C22orf40	NP_997210.3	ILMN_1660379	0003940152	A	1171	GAATACCGTGGGCTTCCTGCCCTCACCCCACACCTCAAGACCATCCCACT	22	-	46640181-46640230	22q13.31d	Homo sapiens chromosome 22 open reading frame 40 (C22orf40), mRNA.					
Homo sapiens	RefSeq	NM_001114734.1	ILMN_342038	PABPC4L	NM_001114734.1	NM_001114734.1		132430	168229149	NM_001114734.1	PABPC4L	NP_001108206.1	ILMN_3241262	0005090131	S	4693	GCCACTGTTTCTACTTTCACCCTTCTCTCCACACATATTGCCACGTCTGC	4	-	135117689-135117738	4q28.3e	Homo sapiens poly(A) binding protein, cytoplasmic 4-like (PABPC4L), mRNA.				DKFZp686J06116	DKFZp686J06116
Homo sapiens	RefSeq	NM_015886.3	ILMN_21478	PI15	NM_015886.3	NM_015886.3		51050	66932906	NM_015886.3	PI15	NP_056970.1	ILMN_2071446	0004490626	S	6310	AGTCTTTCAGTTTGGGGGAGAATTAAATACTGTGCTAAGCTGGTGCTTGG	8	+	75766842-75766891	8q21.11b	Homo sapiens peptidase inhibitor 15 (PI15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of the serine endopeptidase trypsin [goid 30304] [pmid 9473672] [evidence NAS]	P24TI; CRISP8; DKFZp686F0366; P25TI	P24TI; CRISP8; DKFZp686F0366; P25TI
Homo sapiens	RefSeq	NM_015886.3	ILMN_21478	PI15	NM_015886.3	NM_015886.3		51050	66932906	NM_015886.3	PI15	NP_056970.1	ILMN_1661895	0002470678	S	6115	CTCACCTTCTCCAGTGCCTAGGAATATTCTTCTCTGAGCCCTAGGATTGA	8	+	75766647-75766696	8q21.11b	Homo sapiens peptidase inhibitor 15 (PI15), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]; Stops, prevents or reduces the activity of the serine endopeptidase trypsin [goid 30304] [pmid 9473672] [evidence NAS]	P24TI; CRISP8; DKFZp686F0366; P25TI	P24TI; CRISP8; DKFZp686F0366; P25TI
Homo sapiens	RefSeq	NM_020675.3	ILMN_915	SPC25	NM_020675.3	NM_020675.3		57405	23510353	NM_020675.3	SPC25	NP_065726.1	ILMN_2149400	0005860021	S	1091	CCCACCTAGGAGTGAGAATATGTGGTGTTTGGTTTTTTGTCCTTTCGATA	2	-	169727606-169727655	2q24.3f	Homo sapiens SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) (SPC25), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15961401] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14699129] [evidence IPI]	SPBC25; MGC22228; AD024	SPBC25; MGC22228; AD024
Homo sapiens	RefSeq	NM_020675.3	ILMN_915	SPC25	NM_020675.3	NM_020675.3		57405	23510353	NM_020675.3	SPC25	NP_065726.1	ILMN_1814281	0001070411	S	666	GCAAGGGACTATGAAGTGTCAGATAGTGCCCCTCATCTTGAGGGCCTAGC	2	-	169728031-169728065:169730095-169730109	2q24.3f	Homo sapiens SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) (SPC25), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15961401] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14699129] [evidence IPI]	SPBC25; MGC22228; AD024	SPBC25; MGC22228; AD024
Homo sapiens	RefSeq	NM_022490.1	ILMN_2978	POLR1E	NM_022490.1	NM_022490.1		64425	11968046	NM_022490.1	POLR1E	NP_071935.1	ILMN_2110167	0004040504	S	1762	GCCTTGCTTTAGCACAGGTATGAAGCCAGAAGCCAGCATCTCAACTGTGC	9	+	37493099-37493148	9p13.2a	Homo sapiens polymerase (RNA) I polypeptide E, 53kDa (POLR1E), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16514417] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ13390; FLJ13970; RP11-405L18.3; PRAF1; PAF53	FLJ13390; FLJ13970; RP11-405L18.3; PRAF1; PAF53
Homo sapiens	RefSeq	NM_022490.1	ILMN_2978	POLR1E	NM_022490.1	NM_022490.1		64425	11968046	NM_022490.1	POLR1E	NP_071935.1	ILMN_1678934	0006480064	S	1344	GGAGGAAGATTACCTAGACGCATGCTTTCCAGACAGGGCGTTTTGGCTGC	9	+	37489312-37489361	9p13.2a	Homo sapiens polymerase (RNA) I polypeptide E, 53kDa (POLR1E), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16514417] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ13390; FLJ13970; RP11-405L18.3; PRAF1; PAF53	FLJ13390; FLJ13970; RP11-405L18.3; PRAF1; PAF53
Homo sapiens	Unigene	Hs.121413	ILMN_75744	HS.121413	Hs.121413		Hs.121413		27823655	BX089065			ILMN_1858006	0000580022	S	336	GCCACATGGGTAAATCCTGGAGCTTCTGGGAGGCCTGAAGATGGAGATAC	2	+	172895160-172895209		BX089065 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998M053390 ; IMAGE:1344172, mRNA sequence					
Homo sapiens	RefSeq	XM_938114.1	ILMN_33710	LOC345051	XM_938114.1	XM_938114.1		345051	88981212	XM_938114.1	LOC345051	XP_943207.1	ILMN_1811453	0006350767	A	1378	GCTGGCCTTCGCTACCTGCACACCCAGTATTGCCACCAGCAGACAGAAGT				4q31.22b	PREDICTED: Homo sapiens similar to stromal cell derived factor receptor 2 (LOC345051), mRNA.					
Homo sapiens	RefSeq	XM_001713947.1	ILMN_338546	LOC100129346	XM_001713947.1	XM_001713947.1		100129346	169161425	XM_001713947.1	LOC100129346	XP_001713999.1	ILMN_3180628	0003520017	A	605	TCGGTTTCACACGCTTTCCCTCTTGATCTAAGAACCTTTAAAAATCCGCC	1	-	2970461-2970510	1p36.32c	PREDICTED: Homo sapiens similar to FLJ42875 protein (LOC100129346), mRNA.					
Homo sapiens	RefSeq	NM_016057.1	ILMN_4037	COPZ1	NM_016057.1	NM_016057.1		22818	7706336	NM_016057.1	COPZ1	NP_057141.1	ILMN_1728535	0006330309	S	1461	TCAGCTCCCCGACATGCATTTACTCTCTGCCGTGGGTCTGCAGTCGCTGC	12	+	53031464-53031513	12q13.13f	Homo sapiens coatomer protein complex, subunit zeta 1 (COPZ1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8599108] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8533093] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [evidence ISS]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [pmid 11056392] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11030615] [evidence TAS]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11031247] [evidence EXP]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 11056392] [evidence IDA]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a membrane. A membrane is a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16044] [pmid 11031247] [evidence EXP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat [goid 48205] [pmid 16956762] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CGI-120; COPZ; zeta1-COP	CGI-120; COPZ; zeta1-COP
Homo sapiens	RefSeq	XM_940136.1	ILMN_42754	LOC647044	XM_930041.1	XM_930041.1		647044	89029246	XM_930041.1	LOC647044	XP_935134.1	ILMN_1733175	0001980296	S	95	AAAGAATGCCGACGGAGGGCCCTTGGCCTGCAGATGCACCCTCCTGGATG	9	+	38517188-38517237	9p13.1b	PREDICTED: Homo sapiens hypothetical LOC647044 (LOC647044), mRNA.					
Homo sapiens	RefSeq	NM_014326.3	ILMN_2606	DAPK2	NM_014326.3	NM_014326.3		23604	71774012	NM_014326.3	DAPK2	NP_055141.2	ILMN_1791847	0004290524	S	2255	ATGCCCATGCTCCCTCTACCTCACTGCCACCACTCCTGCTGTTAGGAGCT	15	-	64199558-64199607	15q22.31a	Homo sapiens death-associated protein kinase 2 (DAPK2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10376525] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10376525] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 10376525] [evidence IMP]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 10376525] [evidence IDA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate, dependent on the presence of calcium-bound calmodulin [goid 4683] [pmid 10629061] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 10376525] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 10376525] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 10629061] [evidence IPI]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	DRP-1; MGC119312	DRP-1; MGC119312
Homo sapiens	Unigene	Hs.119225	ILMN_75559	HS.119225	Hs.119225		Hs.119225		31445333	CD513615			ILMN_1855976	0002760040	S	506	GTGGGCAGGGGGCCCTATCGCACCAGGAAGCTTGTTTATTGGTTGCATTA	2	+	46730968-46731017		AGENCOURT_14366553 NIH_MGC_179 Homo sapiens cDNA clone IMAGE:30394729 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001288.4	ILMN_29900	CLIC1	NM_001288.4	NM_001288.4		1192	48375182	NM_001288.4	CLIC1	NP_001279.2	ILMN_1756982	0003450072	S	952	GAGCTCGCCTATGAGCAAGTGGCAAAGGCCCTCAAATAAGCCCCTCCTGG	6	-	31806586-31806597:31806598-31806635	6p21.33a	Homo sapiens chloride intracellular channel 1 (CLIC1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10793131] [evidence IDA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10793131] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16130169] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10793131] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [pmid 10793131] [evidence TAS]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [pmid 9139710] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]	NCC27; G6	NCC27; G6
Homo sapiens	RefSeq	NM_007099.2	ILMN_18542	ACP1	NM_007099.2	NM_007099.2		52	30090001	NM_007099.2	ACP1	NP_009030.1	ILMN_1669633	0001500152	A	982	CCTAGGGCCTTTTGTGGATTGACAGTAGTCCCCTCCGTAGGAGCTCACAG	2	+	267740-267789	2p25.3g	Homo sapiens acid phosphatase 1, soluble (ACP1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 1587862] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [evidence IEA];  [goid 4726] [evidence IEA]; Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum [goid 3993] [pmid 1587862] [evidence TAS];  [goid 4726] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17353931] [evidence IPI]	HAAP; MGC3499; MGC111030	HAAP; MGC3499; MGC111030
Homo sapiens	RefSeq	NM_005990.2	ILMN_168427	STK10	NM_005990.3	NM_005990.3		6793	126362970	NM_005990.3	STK10	NP_005981.3	ILMN_1651692	0005270241	S	4209	TCTGCCCCATCCCCCCGACTGTGTTCAGGAGTCCCACCTTGCATTTCAGA	5	-	171471654-171471703	5q35.1e	Homo sapiens serine/threonine kinase 10 (STK10), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9278426] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9278426] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRO2729; LOK	PRO2729; LOK
Homo sapiens	RefSeq	NM_002744.4	ILMN_176361	PRKCZ	NM_002744.4	NM_002744.4		5590	75709224	NM_002744.4	PRKCZ	NP_002735.3	ILMN_2386982	0002750324	A	2235	TCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAG	1	+	2087496-2087531:2090817-2090830	1p36.33a	Homo sapiens protein kinase C, zeta (PRKCZ), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7925449] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7925449] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7925449] [evidence TAS]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The region that lies just beneath the plasma membrane on the apical edge of a cell [goid 45179] [evidence IEA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 10477520] [evidence TAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10770953] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4700] [pmid 8224878] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12893243] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11755531] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PKC2	PKC2
Homo sapiens	RefSeq	NM_001003676.1	ILMN_29881	C11ORF49	NM_001003676.1	NM_001003676.1		79096	51558744	NM_001003676.1	C11orf49	NP_001003676.1	ILMN_1796440	0007160673	I	1107	CAGGGGTTTACCCTAGTGTTAAGAGTGGGCATGGAGGCCCTGCTCTCTGT	11	+	47135313-47135345:47135940-47135956	11p11.2b	Homo sapiens chromosome 11 open reading frame 49 (C11orf49), transcript variant 1, mRNA.				FLJ22210; MGC4707	FLJ22210; MGC4707
Homo sapiens	RefSeq	NM_000408.2	ILMN_9672	GPD2	NM_000408.2	NM_000408.2		2820	50811881	NM_000408.2	GPD2	NP_000399.1	ILMN_2105643	0005700433	S	2366	CCAGAGATGACTGAAACCACTCTGAAATAATGAATGTGGATAGCTGCCTT	2	+	157147737-157147786	2q24.1c	Homo sapiens glycerol-3-phosphate dehydrogenase 2 (mitochondrial) (GPD2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; An enzyme complex that catalyzes the dehydrogenation of sn-glycerol 3-phosphate to form glycerone phosphate [goid 9331] [evidence IEA]	The chemical reactions and pathways involving glycerol-3-phosphate, a phosphoric monoester of glycerol [goid 6072] [evidence IEA]; The formation of glucose from noncarbohydrate precursors, such as pyruvate, amino acids and glycerol [goid 6094] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor [goid 4368] [pmid 9070847] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9070847] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	mGPDH; GDH2	mGPDH; GDH2
Homo sapiens	RefSeq	XM_001718426.1	ILMN_339497	LOC100128683	XM_001718426.1	XM_001718426.1		100128683	169204159	XM_001718426.1	LOC100128683	XP_001718478.1	ILMN_3181828	0003800356	A	492	CGGGAACTCCCTACTTGGATGCATCTTTGCAAGCCAGGAGAAGAAGGGGC	12	+	51092583-51092619:51108208-51108220	12q13.13d	PREDICTED: Homo sapiens hypothetical LOC100128683 (LOC100128683), mRNA.					
Homo sapiens	RefSeq	NM_003043.2	ILMN_25763	SLC6A6	NM_003043.3	NM_003043.3		6533	110082729	NM_003043.3	SLC6A6	NP_003034.2	ILMN_1673586	0002810280	S	4458	GGAAGTCGTTCCTCAACTCTCCCCAAGGCACCTGTCTCCAATCAGAGCCC	3	+	14502784-14502833	3p25.1a	Homo sapiens solute carrier family 6 (neurotransmitter transporter, taurine), member 6 (SLC6A6), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of, within or between cells [goid 1762] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of taurine into, out of, within or between cells [goid 15734] [evidence IEA]; The directed movement of beta-alanine, 3-aminopropanoic acid, into, out of, within or between cells [goid 1762] [evidence IEA]; The chemical reactions and pathways involving amino acids, organic acids containing one or more amino substituents [goid 6520] [pmid 8010975] [evidence TAS]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of taurine into, out of, within or between cells [goid 15734] [evidence IEA]	Catalysis of the transfer of beta-alanine from one side of a membrane to the other. Beta-alanine is 3-aminopropanoic acid [goid 1761] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: taurine(out) + Na+(out) = taurine(in) + Na+(in) [goid 5369] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of beta-alanine from one side of a membrane to the other. Beta-alanine is 3-aminopropanoic acid [goid 1761] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: taurine(out) + Na+(out) = taurine(in) + Na+(in) [goid 5369] [pmid 8010975] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]	MGC131729; TAUT; MGC10619	TAUT; MGC10619
Homo sapiens	RefSeq	NM_004249.1	ILMN_23100	RAB28	NM_004249.1	NM_004249.1		9364	4758993	NM_004249.1	RAB28	NP_004240.1	ILMN_2410864	0001430500	A	335	AGAAAGTGAGCGAGGAGTCAGAAACTCAGCCACTGGTTGCCTTGGTAGGC	4	-	13071427-13071476	4p15.33c	Homo sapiens RAB28, member RAS oncogene family (RAB28), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8647132] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC41862	MGC41862
Homo sapiens	RefSeq	XM_936455.1	ILMN_138748	ZNF658	XM_936455.1	XM_936455.1		26149	89030334	XM_936455.1	ZNF658	XP_941548.1	ILMN_1808171	0003170719	I	10	CCATGTGCATTTCAGAAGAATGTGAATTCAGCTGTTGAATGCATTGTGTC				9p12b	PREDICTED: Homo sapiens zinc finger protein 658 (ZNF658), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_000218.2	ILMN_22163	KCNQ1	NM_000218.2	NM_000218.2		3784	32479526	NM_000218.2	KCNQ1	NP_000209.2	ILMN_2409520	0003890437	A	3197	TGCAGTTCCCCTGGAAGCAGTGCCCAGGTGGCTGTGGAATAGGAACGCTA	11	+	2683264-2683311:2746650-2746651	11p15.5a-p15.4d	Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 1 (KCNQ1), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8900283] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8900283] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8528244] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9020846] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8528244] [evidence NAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9020846] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 8900283] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	JLNS1; ATFB1; WRS; LQT; Kv1.9; RWS; Kv7.1; FLJ26167; SQT2; KCNA8; KVLQT1; KCNA9; LQT1	JLNS1; ATFB1; WRS; LQT; Kv1.9; RWS; Kv7.1; FLJ26167; SQT2; KCNA8; KVLQT1; KCNA9; LQT1
Homo sapiens	RefSeq	NM_000218.2	ILMN_22163	KCNQ1	NM_000218.2	NM_000218.2		3784	32479526	NM_000218.2	KCNQ1	NP_000209.2	ILMN_1656079	0002510059	I	10	CTGGCAGCAGTGGCTGCCCGCACTGCGCCCGGGCGCTCGCCTTCGCTGCA	11	+	2422806-2422855	11p15.5a-p15.4d	Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 1 (KCNQ1), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8900283] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8900283] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8528244] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9020846] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8528244] [evidence NAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9020846] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 8900283] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	JLNS1; ATFB1; WRS; LQT; Kv1.9; RWS; Kv7.1; FLJ26167; SQT2; KCNA8; KVLQT1; KCNA9; LQT1	JLNS1; ATFB1; WRS; LQT; Kv1.9; RWS; Kv7.1; FLJ26167; SQT2; KCNA8; KVLQT1; KCNA9; LQT1
Homo sapiens	RefSeq	NM_006121.2	ILMN_177761	KRT1	NM_006121.3	NM_006121.3		3848	119395749	NM_006121.3	KRT1	NP_006112.3	ILMN_1735712	0002450647	S	2056	GCAAGACCGAGGTCGATTTGTCCCAGCCTTACCGGAGAAAAGAGCTATGG	12	-	53068865-53068914	12q13.13d	Homo sapiens keratin 1 (KRT1), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 1381288] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11290596] [evidence IDA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]	Any process involved in the activation of any of the steps of the lectin pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes [goid 1867] [pmid 11549596] [evidence IPI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 11549596] [evidence NAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 1380725] [evidence TAS]; An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [pmid 11290596] [evidence NAS]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [pmid 11290596] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 11290596] [evidence NAS]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 1380725] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11290596] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11290596] [evidence IPI]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [pmid 11549596] [evidence IPI]	EHK1; CK1; KRT1A; K1	EHK1; CK1; KRT1A; K1
Homo sapiens	RefSeq	NM_182706.2	ILMN_179046	SCRIB	NM_182706.3	NM_182706.3		23513	115527064	NM_182706.3	SCRIB	NP_874365.2	ILMN_1695181	0006590672	I	4727	TACAGGGCCTTTGCGGCCCTGCCTTCTTCCAGACCTGTCTATGACATCCA	8	-	144945824-144945873	8q24.3g	Homo sapiens scribbled homolog (Drosophila) (SCRIB), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	CRIB1; SCRIB1; SCRB1; Vartul	CRIB1; SCRB1; Vartul; SCRIB1
Homo sapiens	RefSeq	NR_002576.1	ILMN_15622	SNORA21	NR_002576.1	NR_002576.1		619505	77735361	NR_002576.1	SNORA21		ILMN_3244343	0005910577	S	46	GAGCCGTCAAGAAAGGGGAGAGTGAAAACATCGCTTTTGGGTGAAGTGGC	17	-	37009153-37009202	17q12c	Homo sapiens small nucleolar RNA, H/ACA box 21 (SNORA21), small nucleolar RNA.				ACA21	ACA21
Homo sapiens	RefSeq	XM_001724677.1	ILMN_348009	LOC100130008	XM_001724677.1	XM_001724677.1		100130008	169171826	XM_001724677.1	LOC100130008	XP_001724729.1	ILMN_3191596	0006020411	A	66	GTGTCTGGCACGCGCCACCCCGATGTACCAGACAAGAAGACAAGAAAATG				7q22.1c	PREDICTED: Homo sapiens similar to hCG2024106, transcript variant 3 (LOC100130008), mRNA.					
Homo sapiens	RefSeq	XM_001724677.1	ILMN_348009	LOC100130008	XM_001724677.1	XM_001724677.1		100130008	169171826	XM_001724677.1	LOC100130008	XP_001724729.1	ILMN_3268067	0001240463	M	274	CGAAAGCTGCCAAAAGTGACATGCAGGATTTCTGACAGGACTCTGGGCCC				7q22.1c	PREDICTED: Homo sapiens similar to hCG2024106, transcript variant 3 (LOC100130008), mRNA.					
Homo sapiens	RefSeq	NM_001505.1	ILMN_176926	GPER	NM_001039966.1	NM_001039966.1		2852	91106713	NM_001039966.1	GPER	NP_001035055.1	ILMN_1665435	0003120647	I	1981	AGTCGGATGTGAGGTTCAGCAGTGCCGTGTAGACAGCCTTGGCCGCATAG	7	+	1098987-1099018:1099019-1099036	7p22.3b	Homo sapiens G protein-coupled estrogen receptor 1 (GPER), transcript variant 3, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8920907] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8920907] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	LyGPR; DRY12; GPCR-Br; LERGU; MGC99678; GPR30; CEPR; CMKRL2; FEG-1; LERGU2	GPCR-Br; LERGU; MGC99678; CMKRL2; FEG-1; LERGU2
Homo sapiens	RefSeq	NM_001031682.1	ILMN_176926	GPER	NM_001039966.1	NM_001039966.1		2852	91106713	NM_001039966.1	GPER	NP_001035055.1	ILMN_1795298	0000520463	A	2745	AATTGCACTCATGTGGACTGGGACCGTGCGAGCTGCCGTGTGGGTTAGTC	7	+	1099751-1099800	7p22.3b	Homo sapiens G protein-coupled estrogen receptor 1 (GPER), transcript variant 3, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8920907] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8920907] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	LyGPR; DRY12; GPCR-Br; LERGU; MGC99678; GPR30; CEPR; CMKRL2; FEG-1; LERGU2	GPCR-Br; LERGU; MGC99678; CMKRL2; FEG-1; LERGU2
Homo sapiens	RefSeq	NM_001039966.1	ILMN_176926	GPER	NM_001039966.1	NM_001039966.1		2852	91106713	NM_001039966.1	GPER	NP_001035055.1	ILMN_2384056	0000270593	A	2920	GAGGCTGGTGACGTTCAGCCTTTGTCAATAAACCTGTCATGTGCGGATCC	7	+	1099926-1099975	7p22.3b	Homo sapiens G protein-coupled estrogen receptor 1 (GPER), transcript variant 3, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8920907] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8920907] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	LyGPR; DRY12; GPCR-Br; LERGU; MGC99678; GPR30; CEPR; CMKRL2; FEG-1; LERGU2	LyGPR; DRY12; GPCR-Br; LERGU; MGC99678; GPR30; CEPR; CMKRL2; FEG-1; LERGU2
Homo sapiens	RefSeq	NM_015466.1	ILMN_1812	PTPN23	NM_015466.1	NM_015466.1		25930	24308072	NM_015466.1	PTPN23	NP_056281.1	ILMN_1654318	0000840408	S	4835	AGCTCCCTGCGGGGCAAACAGCGGATGAGCAAGCATAACTTTCTGCAGGC	3	+	47429548-47429597	3p21.31g	Homo sapiens protein tyrosine phosphatase, non-receptor type 23 (PTPN23), mRNA.	A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HDPTP; KIAA1471; PTP-TD14; DKFZP564F0923; HD-PTP	HDPTP; KIAA1471; PTP-TD14; DKFZP564F0923; HD-PTP
Homo sapiens	RefSeq	XR_017135.2	ILMN_173892	LOC441687	XR_017135.2	XR_017135.2		441687	169207054	XR_017135.2	LOC441687		ILMN_3289499	0000630113	M	194	GGATGAAAGAGAAGGCAAATGTTGAAACGATGAAAGAGAAGGCAGTTGTG	14	-	63882803-63882852	14q23.2b	PREDICTED: Homo sapiens similar to hCG2040161 (LOC441687), mRNA.					
Homo sapiens	RefSeq	NM_178449.2	ILMN_178258	PTH2	NM_178449.2	NM_178449.2		113091	31341960	NM_178449.2	PTH2	NP_848544.1	ILMN_1673553	0000580392	S	400	CCCTGAGCGCGCTGCCCGTCCCCATCTTAATAAAGACCATGCCCTGCGCT	19	-	54617492-54617536:54617537-54617541	19q13.33b	Homo sapiens parathyroid hormone 2 (PTH2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [evidence IEA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the protein kinase B signaling cascade, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B [goid 51898] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]		TIP39
Homo sapiens	RefSeq	NM_032194.1	ILMN_29712	RPF2	NM_032194.1	NM_032194.1		84154	39930468	NM_032194.1	RPF2	NP_115570.1	ILMN_1664167	0002350368	S	669	TGGGACCCTCATTGGATCTGGTTCTGAGGAGGACACACCTGGCATCGGAT	6	+	111345439-111345488	6q21h	Homo sapiens ribosome production factor 2 homolog (S. cerevisiae) (RPF2), mRNA.				FLJ21087; RPF2; bA397G5.4	FLJ21087; RPF2; bA397G5.4
Homo sapiens	RefSeq	NM_207364.1	ILMN_1875	GPR148	NM_207364.1	NM_207364.1		344561	46409359	NM_207364.1	GPR148	NP_997247.1	ILMN_1703183	0001240484	S	866	GTACCACCACATTGACTCTGGGACTCACACATGGCTCCTGGCAGCTAACA	2	+	131204058-131204107	2q21.1c	Homo sapiens G protein-coupled receptor 148 (GPR148), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	BTR; PGR6	BTR; PGR6
Homo sapiens	RefSeq	XM_001716821.1	ILMN_348737	LOC100134327	XM_001716821.1	XM_001716821.1		100134327	169163745	XM_001716821.1	LOC100134327	XP_001716873.1	ILMN_3246565	0007330121	S	30	TTCTGCTTACAGACTCATGGAGAGATTTCTCATGGATGGCTTTCAGCCAC					PREDICTED: Homo sapiens similar to RAB, member of RAS oncogene family-like 2A (LOC100134327), mRNA.					
Homo sapiens	RefSeq	NM_203289.2	ILMN_170623	LOC642559	XR_016333.1	XR_016333.1		642559	113423212	XR_016333.1	LOC642559		ILMN_1679060	0005820538	A	1079	CACTCTGGGCTCTCCCATGCATTCAAACTGAGGTGCCTGCCCTTCTAGGA	12	-	8177614-8177663	12p13.31b	PREDICTED: Homo sapiens similar to POU domain, class 5, transcription factor 1 (Octamer-binding transcription factor 3) (Oct-3) (Oct-4) (LOC642559), mRNA.					OTF4; OCT3; MGC22487; Oct4; OTF3
Homo sapiens	RefSeq	NM_020640.2	ILMN_163162	DCUN1D1	NM_020640.2	NM_020640.2		54165	36030882	NM_020640.2	DCUN1D1	NP_065691.2	ILMN_2043865	0006250066	S	3054	CTAGGGCTGAAAAGAGAAGACTGATTTAATGTGGTGTGATTATTCTGAAG	3	-	184143301-184143350	3q26.33c	Homo sapiens DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) (DCUN1D1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	SCRO; RP42; SCCRO; DCUN1L1; Tes3	SCRO; RP42; SCCRO; DCUN1L1; Tes3
Homo sapiens	RefSeq	NM_002817.2	ILMN_15800	PSMD13	NM_175932.1	NM_175932.1		5719	28872729	NM_175932.1	PSMD13	NP_787128.1	ILMN_1704404	0007550601	A	1353	AGCTGGCTGCTCAGACGGTCGACATTGAATTTGGGTGGGGGTTGGGATCC	11	+	242664-242713	11p15.5d	Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 (PSMD13), transcript variant 2, mRNA.	A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 8811196] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes, unfolds ubiquitinated proteins and translocates them to the proteasome core complex [goid 5838] [pmid 9714768] [evidence TAS]	Progression through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells [goid 7127] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	HSPC027; p40.5	HSPC027; p40.5
Homo sapiens	RefSeq	XM_001722183.1	ILMN_352297	LOC100127904	XM_001722183.1	XM_001722183.1		100127904	169214557	XM_001722183.1	LOC100127904	XP_001722235.1	ILMN_3273078	0001400370	M	485	CCTTACCCCAGTGCTCAAGGAGGTTGGAGAAGCTGAAAGAGAGGACTGGT	20	-	44813617-44813666	20q13.12c	PREDICTED: Homo sapiens hypothetical protein LOC100127904 (LOC100127904), mRNA.					
Homo sapiens	RefSeq	XM_001713692.1	ILMN_338462	LOC100130829	XM_001713692.1	XM_001713692.1		100130829	169216332	XM_001713692.1	LOC100130829	XP_001713744.1	ILMN_3238471	0003520477	S	44	GGCCGGCGTGGCGCTCGGCGCCGAACAGGCCCCGAGGAGGCCGCAGTTAG					PREDICTED: Homo sapiens hypothetical protein LOC100130829 (LOC100130829), mRNA.					
Homo sapiens	RefSeq	NM_001030001.1	ILMN_15150	RPS29	NM_001032.3	NM_001032.3		6235	71772593	NM_001032.3	RPS29	NP_001023.1	ILMN_1694742	0005290289	A	63	GCGAAAATTCGGCCAGGGTTCTCGCTCTTGTCGTGTCTGTTCAAACCGGC	14	-	50052747-50052767:50053003-50053031	14q22.1a	Homo sapiens ribosomal protein S29 (RPS29), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8781548] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001032.3	ILMN_15150	RPS29	NM_001032.3	NM_001032.3		6235	71772593	NM_001032.3	RPS29	NP_001023.1	ILMN_1738243	0007210372	I	194	TGGACTAAATGCTCTTCCTTCAGAGGATTATCCGGGGCATCTACTCAATG	14	-	50050342-50050384:50050385-50050391	14q22.1a	Homo sapiens ribosomal protein S29 (RPS29), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 8781548] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_198155.1	ILMN_29537	C21ORF33	NM_198155.1	NM_198155.1		8209	38026959	NM_198155.1	C21orf33	NP_937798.1	ILMN_2386205	0005870576	A	682	GACCAGAAAAACAAGGTGGTCACGACCCCAGCCTTCATGTGCGAGACGGC	21	+	44389143-44389192	21q22.3d	Homo sapiens chromosome 21 open reading frame 33 (C21orf33), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]			ES1; GT335; HES1; KNP-I; KNPH; KNPI; D21S2048E	ES1; GT335; HES1; KNP-I; KNPH; KNPI; D21S2048E
Homo sapiens	RefSeq	NM_001004434.1	ILMN_5582	SLC30A2	NM_001004434.1	NM_001004434.1		7780	52352804	NM_001004434.1	SLC30A2	NP_001004434.1	ILMN_1785549	0000060039	A	2020	TGCACTAACAGCCTCCAAGCCCCCTGGCACTTCTGTTGCCCTGAGAGTGT	1	-	26364917-26364966	1p36.11b	Homo sapiens solute carrier family 30 (zinc transporter), member 2 (SLC30A2), transcript variant 1, mRNA.	A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	FLJ36708; ZnT-2; MGC11303; PP12488; ZNT2	FLJ36708; ZnT-2; MGC11303; PP12488; ZNT2
Homo sapiens	RefSeq	NM_002865.1	ILMN_18037	RAB2A	NM_002865.1	NM_002865.1		5862	4506364	NM_002865.1	RAB2A	NP_002856.1	ILMN_1652394	0005360379	S	822	AGCAGGCTGGGGGCGGCTGCTGTTGAGTCTGTTTTTACTGTCTAGCTGCC	8	+	61533303-61533328:61533329-61533352	8q12.1d	Homo sapiens RAB2A, member RAS oncogene family (RAB2A), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding any of the compartments of the ER-Golgi intermediate compartment system [goid 33116] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of substances from the endoplasmic reticulum (ER) to the Golgi, mediated by COP II vesicles. Small COP II coated vesicles form from the ER and then fuse directly with the cis-Golgi. Larger structures are transported along microtubules to the cis-Golgi [goid 6888] [pmid 8910601] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 2501306] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [evidence IEA]	RAB2	RAB2
Homo sapiens	RefSeq	XM_001719984.1	ILMN_339096	LOC100127905	XM_001719984.1	XM_001719984.1		100127905	169169123	XM_001719984.1	LOC100127905	XP_001720036.1	ILMN_3181333	0006130494	A	12	GGTTCTCGAACACGTGCACCTGCTGCTGTATATCTTGGCAGCAAAAACAT				6q14.3c	PREDICTED: Homo sapiens similar to chromosome 21 open reading frame 51 (LOC100127905), mRNA.					
Homo sapiens	RefSeq	NM_006571.2	ILMN_29012	DCTN6	NM_006571.2	NM_006571.2		10671	18426895	NM_006571.2	DCTN6	NP_006562.1	ILMN_1744059	0000430553	S	536	GTCGGGTGCAGACTGAGCGACCGCAGCCCCAGACACTACAGCTGGATTTC	8	+	30038121-30038146:30040591-30040614	8p12e	Homo sapiens dynactin 6 (DCTN6), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A 20S multiprotein assembly of total mass about 1.2 MDa that activates dynein-based activity in vivo. A large structural component of the complex is an actin-like 40 nm filament composed of actin-related protein, to which other components attach [goid 5869] [evidence IEA]		Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with dynein, the multisubunit protein complex that is associated with microtubules [goid 45502] [evidence IEA]	WS-3	WS-3
Homo sapiens	RefSeq	NM_020314.3	ILMN_13238	C16ORF62	NM_020314.4	NM_020314.4		57020	142371913	NM_020314.4	C16orf62	NP_064710.3	ILMN_1729450	0001170719	S	3335	GTTAGAGCACACCCAAAGTCTGGAACTGTGTTACCTGAACCCCTATGGAG	16	+	19610235-19610284	16p12.3a	Homo sapiens chromosome 16 open reading frame 62 (C16orf62), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ21040; MGC16824; DKFZp313M0539; DKFZp434B0212	DKFZp313M0539; FLJ21040; DKFZp434B0212
Homo sapiens	RefSeq	NM_138326.1	ILMN_21475	ACMSD	NM_138326.2	NM_138326.2		130013	109715855	NM_138326.2	ACMSD	NP_612199.2	ILMN_1727091	0007040450	S	928	TTTGGGAACCGATTACCCCTTTCCACTAGGTGAGCTGGAACCTGGGAAAC	2	+	135372392-135372441	2q21.3a	Homo sapiens aminocarboxymuconate semialdehyde decarboxylase (ACMSD), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12140278] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving quinolinate, the anion of quinolinic acid, also known as 2,3-pyridinedicarboxylic acid [goid 46874] [pmid 12140278] [evidence IDA]	Catalysis of the reaction: 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2 [goid 1760] [pmid 12140278] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]		
Homo sapiens	RefSeq	XM_001132865.1	ILMN_174191	LOC729225	XM_001132865.1	XM_001132865.1		729225	113412189	XM_001132865.1	LOC729225	XP_001132865.1	ILMN_3229889	0001980390	A	1687	GGGGTTGCAGCCGCCAGCTCCATAACCACGCCTCCTTCCCGGCTGGCAGG				1p32.3d	PREDICTED: Homo sapiens hypothetical LOC729225 (LOC729225), mRNA.					
Homo sapiens	RefSeq	NM_005296.1	ILMN_17576	LPAR4	NM_005296.1	NM_005296.1		2846	4885310	NM_005296.1	LPAR4	NP_005287.1	ILMN_1670692	0006550070	S	2038	CAGCACAGCCAGAAAGGGGCTGCATTTGTGCCCAGGTCAGGAGCAAATTG	X	+	77898994-77899043	Xq21.1b	Homo sapiens lysophosphatidic acid receptor 4 (LPAR4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9073069] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9073069] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	LPAR4; P2Y9; P2Y5-LIKE; LPA4; P2RY9	LPAR4; P2Y9; P2Y5-LIKE; LPA4; P2RY9
Homo sapiens	RefSeq	XR_000284.2	ILMN_13474	LOC154449	NR_002787.1	NR_002787.1		154449	84872078	NR_002787.1	LOC154449		ILMN_1762305	0000010192	A	1153	CCTCCATCGCCGGTCAGTGTTGGGTGGTGTGCCTGTCTCCTCTTTGGACT	6	-	170563549-170563598	6q27f	Homo sapiens hypothetical protein LOC154449 (LOC154449), non-coding RNA.					
Homo sapiens	RefSeq	XM_001723910.1	ILMN_342074	LOC100128667	XM_001723910.1	XM_001723910.1		100128667	169207469	XM_001723910.1	LOC100128667	XP_001723962.1	ILMN_3261175	0002190768	M	1	AGGTGGTCTGGAGAAAGCTGGGAGATGCAGCCAGCTCCAAGCCCTCCATA				14q32.2b	PREDICTED: Homo sapiens hypothetical protein LOC100128667 (LOC100128667), mRNA.					
Homo sapiens	RefSeq	NM_024834.1	ILMN_13531	C10ORF119	NM_024834.2	NM_024834.2		79892	148727274	NM_024834.2	C10orf119	NP_079110.1	ILMN_1761411	0005050112	S	4158	CAGCGTTAATCCTGTATGGCCAGGAAACTGAGTAGACTCCTGTGTAACCC	10	-	121590551-121590600	10q26.11d	Homo sapiens chromosome 10 open reading frame 119 (C10orf119), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	FLJ36756; FLJ13081; MCMBP; MCM-BP	FLJ36756; FLJ13081
Homo sapiens	RefSeq	XM_001714943.1	ILMN_336053	LOC100129660	XM_001714943.1	XM_001714943.1		100129660	169217296	XM_001714943.1	LOC100129660	XP_001714995.1	ILMN_3254278	0006840296	M	821	CTAGATGTGCCTGTTCCATGTATCAGGGACGCAGGTTTTCCCAACAGGGC				Xq28b	PREDICTED: Homo sapiens similar to hCG2000002 (LOC100129660), mRNA.					
Homo sapiens	RefSeq	NM_194358.1	ILMN_21843	RNF41	NM_194358.1	NM_194358.1		10193	37588858	NM_194358.1	RNF41	NP_919339.1	ILMN_1700345	0005260097	I	494	TGATGTGAAAGCTGCCACCTTCAATAGGTCATTTCTCTGCCAGCCTTGCC	12	-	56606838-56606887	12q13.2c	Homo sapiens ring finger protein 41 (RNF41), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11867753] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	SBBI03; NRDP1; MGC45228	SBBI03; MGC45228; NRDP1
Homo sapiens	RefSeq	NR_029834.1	ILMN_389021	MIR200A	NR_029834.1	NR_029834.1		406983	262206071	NR_029834.1	MIR200A		ILMN_3308803	0003990687	S	17	TCTTACCGGACAGTGCTGGATTTCCCAGCTTGACTCTAACACTGTCTGGT				1p36.33b	Homo sapiens microRNA 200a (MIR200A), microRNA.					
Homo sapiens	RefSeq	XM_945975.1	ILMN_307137	C17ORF60	NM_001085423.1	NM_001085423.1		284021	146229332	NM_001085423.1	C17orf60	NP_001078892.1	ILMN_1747347	0004290056	A	397	CGTGACTTCAGCTTCACGATTGTCGACCCGGTGACTTCCCCAGTGCTGAA	17	+	59879430-59879454:59883990-59884014	17q23.3b	Homo sapiens chromosome 17 open reading frame 60 (C17orf60), mRNA.				MGC163278	
Homo sapiens	RefSeq	NM_052855.2	ILMN_23218	ANKRD40	NM_052855.2	NM_052855.2		91369	34147469	NM_052855.2	ANKRD40	NP_443087.1	ILMN_1758846	0005560142	S	1795	GGAAGACTCGGGAAAGCACAGATACTGGACAGATGGATTCTGGTGTGGGG	17	-	46127867-46127916	17q21.33b	Homo sapiens ankyrin repeat domain 40 (ANKRD40), mRNA.				MGC15396; DKFZp451K241	MGC15396; DKFZp451K241
Homo sapiens	RefSeq	XR_016267.2	ILMN_183531	LOC392501	XR_016267.2	XR_016267.2		392501	169216592	XR_016267.2	LOC392501		ILMN_3274711	0006220048	M	87	TGTCTTCCCCTCTTTCCAACGAGCTGAAACAGAAGTATAACGGGTGATCC	X	-	91818473-91818522	Xq21.31e	PREDICTED: Homo sapiens misc_RNA (LOC392501), miscRNA.					
Homo sapiens	RefSeq	XM_927728.1	ILMN_42692	LOC644613	XM_927728.1	XM_927728.1		644613	89034057	XM_927728.1	LOC644613	XP_932821.1	ILMN_1651292	0002680739	S	276	TGGCGGCGGAGTTCGGTGGGCTGGGAGGTGTCGCAGCGCGCACTTCATTT	11	+	64302762-64302811		PREDICTED: Homo sapiens hypothetical protein LOC644613 (LOC644613), mRNA.					
Homo sapiens	RefSeq	XM_927996.1	ILMN_40935	LOC653541	XM_927996.1	XM_927996.1		653541	88978374	XM_927996.1	LOC653541	XP_933089.1	ILMN_1764037	0007550332	S	1	ATGCGATCCCAGACCGCCCTGCTCCTCCGAGCCTTTGAGAAGGATCGCTT	4	+	191223374-191223423	4q35.2d	PREDICTED: Homo sapiens similar to double homeobox, 4 (LOC653541), mRNA.					
Homo sapiens	Unigene	Hs.421200	ILMN_90597	HS.421200	Hs.421200		Hs.421200		3387932	AF070564			ILMN_1900795	0006900082	S	1258	GCTAGAAAGCAATAGGGCGGGGAATGCCGCACCTCTCAGGCAATCAGCAC	5	-	88008507-88008556		Homo sapiens clone 24571 mRNA sequence					
Homo sapiens	RefSeq	XM_290777.4	ILMN_179057	ARL16	NM_001040025.1	NM_001040025.1		339231	91199551	NM_001040025.1	ARL16	NP_001035114.1	ILMN_1679917	0007050500	A	814	GGCTCTGTGCTGAGATGCAATGATGTGTAAACTGAGGCATGTGGAGATGG	17	-	79648567-79648616	17q25.3f	Homo sapiens ADP-ribosylation factor-like 16 (ARL16), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_001040025.1	ILMN_179057	ARL16	NM_001040025.1	NM_001040025.1		339231	91199551	NM_001040025.1	ARL16	NP_001035114.1	ILMN_2188119	0000990154	S	938	TTTGAGAGGCCGAGGCGGGTGTATCACCTGAGGTCGGGAGTTCGAGACTA	17	-	79648443-79648492	17q25.3f	Homo sapiens ADP-ribosylation factor-like 16 (ARL16), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_000602.1	ILMN_6244	SERPINE1	NM_000602.1	NM_000602.1		5054	10835158	NM_000602.1	SERPINE1	NP_000593.1	ILMN_1744381	0000770408	S	2424	GGAGCAGAAATGCAAGGGGCTGCATGACCTACCAGGACAGAACTTTCCCC	7	+	100568583-100568632	7q22.1d	Homo sapiens serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 (SERPINE1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2544876] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2503541] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2544876] [evidence EXP]	The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 9207454] [evidence TAS]; An ongoing process that solubilizes fibrin, chiefly by the proteolytic action of plasmin, resulting in the removal of small blood clots [goid 42730] [pmid 12114510] [evidence TAS]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IEA]	Interacting selectively with any protease or peptidase [goid 2020] [pmid 12114510] [evidence IPI]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 2503541] [evidence EXP]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 2544876] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16272158] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12808446] [evidence IPI]	PAI; PAI-1; PAI1; PLANH1	PAI; PAI-1; PAI1; PLANH1
Homo sapiens	RefSeq	XM_931539.1	ILMN_44996	LOC643424	XM_931539.1	XM_931539.1		643424	88976418	XM_931539.1	LOC643424	XP_936632.1	ILMN_1719139	0002750471	S	1151	GTTCATCATAGGACATCTACAATTTGCAAAGCAGGTGACTGGATATGGAC	4	+	79821742-79821791		PREDICTED: Homo sapiens hypothetical protein LOC643424 (LOC643424), mRNA.					
Homo sapiens	RefSeq	NM_001039523.1	ILMN_44580	CHRNA1	NM_001039523.1	NM_001039523.1		1134	87567782	NM_001039523.1	CHRNA1	NP_001034612.1	ILMN_2268969	0001410017	I	311	GCCACGCCCCAGCTGCGTGACTTTGGGAGTTCCTTTGTTTTCTCATCTGC	2	-	175330927-175330976	2q31.1g	Homo sapiens cholinergic receptor, nicotinic, alpha 1 (muscle) (CHRNA1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 7619526] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [pmid 9221765] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 7619526] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7619526] [evidence TAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [pmid 9221765] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [pmid 9221765] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [pmid 9221765] [evidence IMP]	 [goid 4889] [evidence IEA];  [goid 4889] [pmid 9221765] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [pmid 6688857] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [pmid 7619526] [evidence TAS]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IEA]	FCCMS; ACHRA; ACHRD; CHRNA; CMS2A; SCCMS	FCCMS; ACHRA; ACHRD; CHRNA; CMS2A; SCCMS
Homo sapiens	RefSeq	NM_001039523.1	ILMN_44580	CHRNA1	NM_001039523.1	NM_001039523.1		1134	87567782	NM_001039523.1	CHRNA1	NP_001034612.1	ILMN_2361768	0004570634	A	1431	GTCTTCATGCTTGTTTGCATCATCGGAACCCTAGCCGTGTTTGCAGGTCG	2	-	175321125-175321174	2q31.1g	Homo sapiens cholinergic receptor, nicotinic, alpha 1 (muscle) (CHRNA1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 7619526] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [pmid 9221765] [evidence IDA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 7619526] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7619526] [evidence TAS]; The process of communication from a neuron to a muscle, across a synapse [goid 7274] [pmid 9221765] [evidence IMP]; The process whose specific outcome is the progression of the neuromuscular junction over time, from its formation to the mature structure [goid 7528] [pmid 9221765] [evidence IMP]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [evidence IEA]; Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane [goid 42391] [pmid 9221765] [evidence IMP]	 [goid 4889] [evidence IEA];  [goid 4889] [pmid 9221765] [evidence IMP]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [pmid 6688857] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [pmid 7619526] [evidence TAS]; Interacting selectively with acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions [goid 42166] [evidence IEA]	FCCMS; ACHRA; ACHRD; CHRNA; CMS2A; SCCMS	FCCMS; ACHRA; ACHRD; CHRNA; CMS2A; SCCMS
Homo sapiens	RefSeq	XR_038920.1	ILMN_338923	LOC729780	XR_038920.1	XR_038920.1		729780	169162312	XR_038920.1	LOC729780		ILMN_3299682	0004250722	M	418	ATGCCGACAGGAAGGCTGAGGCTGAGGCTGGGGCTGGGTCAGAGACGGAA				1q23.1e	PREDICTED: Homo sapiens misc_RNA (LOC729780), miscRNA.					
Homo sapiens	RefSeq	XM_943679.1	ILMN_137898	WBSCR19	XM_943679.1	XM_943679.1		285955	89026036	XM_943679.1	WBSCR19	XP_948772.1	ILMN_1718311	0003180364	I	47	ATCCCAGCTACCTGAGAGGCTGAGGCAGAAGAATAAATGGAATCCAGGAG				7p13d	PREDICTED: Homo sapiens Williams Beuren syndrome chromosome region 19, transcript variant 4 (WBSCR19), mRNA.					
Homo sapiens	RefSeq	XM_943679.1	ILMN_137898	WBSCR19	XM_943679.1	XM_943679.1		285955	89026036	XM_943679.1	WBSCR19	XP_948772.1	ILMN_1694571	0000650398	A	883	CGCTCTCGCATACCCTTGCTCCGTAAGCGTCGGTTCCAGTTACGCCGTTG				7p13d	PREDICTED: Homo sapiens Williams Beuren syndrome chromosome region 19, transcript variant 4 (WBSCR19), mRNA.					
Homo sapiens	RefSeq	NM_017410.2	ILMN_178978	HOXC13	NM_017410.2	NM_017410.2		3229	24497535	NM_017410.2	HOXC13	NP_059106.2	ILMN_1759676	0002370296	S	2150	AGATGCTGCCTAACAGTTCCCTCCTCAAAGGCCACCTTGGTGCTGTGGGG	12	+	52626349-52626398	12q13.13f	Homo sapiens homeobox C13 (HOXC13), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10835276] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 10835276] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	HOX3; HOX3G	HOX3; HOX3G
Homo sapiens	RefSeq	XM_944301.1	ILMN_138807	LCE1E	XM_944301.1	XM_944301.1		353135	88952461	XM_944301.1	LCE1E	XP_949394.1	ILMN_1689849	0000130097	I	93	GTGTCCTCTGGGAACAGAAGCAGGGGATTCCACAGAGGGATGCTCAGATC				1q21.3b	PREDICTED: Homo sapiens late cornified envelope 1E, transcript variant 3 (LCE1E), mRNA.		The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]			
Homo sapiens	RefSeq	NM_001009934.1	ILMN_9613	DNASE1L1	NM_001009934.1	NM_001009934.1		1774	58430945	NM_001009934.1	DNASE1L1	NP_001009934.1	ILMN_2380967	0001510543	A	1533	ACCCAGATTGGTGAGATAGGACACTTGTGCAGCAGATATGCCAATGGGCC	X	-	153630661-153630710	Xq28g	Homo sapiens deoxyribonuclease I-like 1 (DNASE1L1), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9205125] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [pmid 9205125] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	XIB; DNAS1L1; DNL1L; DNASEX	DNL1L; XIB; DNAS1L1; DNASEX
Homo sapiens	RefSeq	NM_001009934.1	ILMN_9613	DNASE1L1	NM_001009934.1	NM_001009934.1		1774	58430945	NM_001009934.1	DNASE1L1	NP_001009934.1	ILMN_3249756	0003190494	A	1442	AGTGGGCTCTGGGTTGGGGTAGGGGAAGGGAGGGTTCAGAAAGAGGAATG	X	-	153630752-153630801	Xq28g	Homo sapiens deoxyribonuclease I-like 1 (DNASE1L1), transcript variant 4, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one [goid 6308] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9205125] [evidence TAS]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid [goid 4536] [pmid 9205125] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	XIB; DNAS1L1; DNL1L; DNASEX	DNL1L; XIB; DNAS1L1; DNASEX
Homo sapiens	RefSeq	XM_001134101.1	ILMN_179237	LOC729898	XM_001134101.1	XM_001134101.1		729898	113413491	XM_001134101.1	LOC729898	XP_001134101.1	ILMN_3305447	0000380192	M	72	TCCGCCAGTCAATAGGAAGTACGAGTATTTGGATCATACGGCGGATGTGC	2	-	232007260-232007309	2q37.1b	PREDICTED: Homo sapiens similar to zinc finger and BTB domain containing 8 opposite strand (LOC729898), mRNA.					
Homo sapiens	Unigene	Hs.511723	ILMN_98051	HS.511723	Hs.511723		Hs.511723		15949180	BI837630			ILMN_1824766	0006330681	S	536	GTGCAGAACCCCACTGAAACACTTCCGATGTCAAGTCCAGTTCTACGGGC	7	+	142209170-142209186:142209188-142209195:142209199-142209202		603086843F1 NIH_MGC_120 Homo sapiens cDNA clone IMAGE:5225843 5, mRNA sequence					
Homo sapiens	RefSeq	NM_003440.2	ILMN_21672	ZNF140	NM_003440.2	NM_003440.2		7699	37594441	NM_003440.2	ZNF140	NP_003431.2	ILMN_1727923	0006270056	S	2712	CTGGATGGAATCTGTAGGAAACGGTTCTATTTTGAGGGAAGGGGGATTCC	12	+	132193978-132194027	12q24.33d	Homo sapiens zinc finger protein 140 (ZNF140), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	pHZ-39	pHZ-39
Homo sapiens	RefSeq	XM_945948.1	ILMN_42786	LOC441601	XM_945948.1	XM_945948.1		441601	89034576	XM_945948.1	LOC441601	XP_951041.1	ILMN_1731707	0003360072	A	601	ACCAGAGGAATGCCAACAGTTTAAAAAACAGGTAACTTTTCCGGTCACAC				11p11.12b	PREDICTED: Homo sapiens similar to CDC10 (cell division cycle 10, S.cerevisiae, homolog), transcript variant 3 (LOC441601), mRNA.		The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_001005915.1	ILMN_6289	ERBB3	NM_001005915.1	NM_001005915.1		2065	54792101	NM_001005915.1	ERBB3	NP_001005915.1	ILMN_2397602	0004260482	A	550	CATGTTGAACTATAACACCAACTCCAGCCACGCTCTGCGCCAGCTCCGCT	12	+	54765168-54765217	12q13.2c	Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) (ERBB3), transcript variant s, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11389077] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2687875] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 12646923] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IEA]; Any protein group composed of two or more subunits, which may or may not be identical, which undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43235] [pmid 7514177] [evidence ISS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 7556068] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [pmid 11389077] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14068] [pmid 17701904] [evidence TAS]; The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions [goid 21545] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 12646923] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 11389077] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a substance from a cell or group of cells [goid 51048] [pmid 10559227] [evidence IDA]	Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7514177] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [pmid 11389077] [evidence IPI]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [pmid 7514177] [evidence ISS]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [pmid 7556068] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11389077] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10572067] [evidence IDA]	c-erbB-3; LCCS2; c-erbB3; p85-sErbB3; p45-sErbB3; MGC88033; ErbB-3; p180-ErbB3; MDA-BF-1; HER3; erbB3-S	c-erbB-3; LCCS2; c-erbB3; p85-sErbB3; p45-sErbB3; ErbB-3; erbB3-S; MGC88033; p180-ErbB3; MDA-BF-1; HER3
Homo sapiens	RefSeq	NM_001005915.1	ILMN_6289	ERBB3	NM_001005915.1	NM_001005915.1		2065	54792101	NM_001005915.1	ERBB3	NP_001005915.1	ILMN_1737993	0003120608	I	815	GGAACCCTGTGTCCTTGTGGGGCTGGAGTCAGAGCTGGATCTGTTAACCG	12	+	54765433-54765482	12q13.2c	Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) (ERBB3), transcript variant s, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11389077] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2687875] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 12646923] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [evidence IEA]; Any protein group composed of two or more subunits, which may or may not be identical, which undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 43235] [pmid 7514177] [evidence ISS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion [goid 7162] [pmid 7556068] [evidence IDA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of signal transduction [goid 9968] [pmid 11389077] [evidence IDA]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the phosphoinositide 3-kinase cascade [goid 14068] [pmid 17701904] [evidence TAS]; The process whose specific outcome is the progression of the cranial nerves over time, from its formation to the mature structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions [goid 21545] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 12646923] [evidence NAS]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 11389077] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis in neurons [goid 43524] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a substance from a cell or group of cells [goid 51048] [pmid 10559227] [evidence IDA]	Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 7514177] [evidence ISS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [pmid 11389077] [evidence IPI]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [pmid 7514177] [evidence ISS]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [pmid 7556068] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 11389077] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10572067] [evidence IDA]	c-erbB-3; LCCS2; c-erbB3; p85-sErbB3; p45-sErbB3; MGC88033; ErbB-3; p180-ErbB3; MDA-BF-1; HER3; erbB3-S	c-erbB-3; LCCS2; c-erbB3; p85-sErbB3; p45-sErbB3; ErbB-3; erbB3-S; MGC88033; p180-ErbB3; MDA-BF-1; HER3
Homo sapiens	RefSeq	XM_939967.1	ILMN_165874	LOC285407	XM_209597.8	XM_209597.8		285407	113422485	XM_209597.8	LOC285407	XP_209597.6	ILMN_1669715	0000580612	A	219	GAGCTGTTTGCCTGCGTGTGCTGTGAACTTCAAGTGCTTACATGAGCTGG	11	-	71190535-71190549:71191552-71191586	11q13.4a	PREDICTED: Homo sapiens similar to beta-1,4-mannosyltransferase (LOC285407), mRNA.					
Homo sapiens	RefSeq	NM_014940.2	ILMN_27844	MON1B	NM_014940.2	NM_014940.2		22879	38016939	NM_014940.2	MON1B	NP_055755.1	ILMN_1771651	0005310674	S	2939	ATGTGTGCTGGCAATCAGGGCCGCAGTGTGTTCTGCGCCTGCCCAGAGCT	16	+	75790671-75790720	16q23.1c	Homo sapiens MON1 homolog B (yeast) (MON1B), mRNA.				SAND2; HSRG1	SAND2; HSRG1
Homo sapiens	RefSeq	XM_936347.1	ILMN_31445	LOC653097	XM_925973.2	XM_925973.2		653097	113421421	XM_925973.2	LOC653097	XP_931066.1	ILMN_1701770	0004290370	S	81	AAGACATTCCAACATTACTAATGGCTGCTAGCAGTATGGATGACATTCTG	10	+	42066519-42066568	10q11.1d	PREDICTED: Homo sapiens hypothetical LOC653097 (LOC653097), mRNA.					
Homo sapiens	RefSeq	NM_001136570.1	ILMN_370176	FAM47E	NM_001136570.1	NM_001136570.1		100129583	211971091	NM_001136570.1	FAM47E	NP_001130042.1	ILMN_3237062	0006590577	S	1130	CAGGGGCTACAGGACGCCACGTTTCCTTGAGAATATGTATATCGGGAAGG	4	+	77201473-77201494:77204534-77204561	4q21.1a-q21.1b	Homo sapiens family with sequence similarity 47, member E (FAM47E), mRNA. XM_001722510 XM_001722512					
Homo sapiens	RefSeq	NM_133446.1	ILMN_22934	CTGLF1	NM_133446.1	NM_133446.1		119016	19263342	NM_133446.1	CTGLF1	NP_597703.1	ILMN_2189007	0005820544	S	1400	CATGCGAGAGCAGTAAAAGCAAGTCCCAGCTGACCAGCCAGAGCAAGGCC	10	-	45642037-45642086	10q11.21d	Homo sapiens centaurin, gamma-like family, member 1 (CTGLF1), mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MRIP2	MRIP2
Homo sapiens	RefSeq	NM_203464.1	ILMN_28797	AK3L1	NM_203464.1	NM_203464.1		205	53832000	NM_203464.1	AK3L1	NP_982289.1	ILMN_1686522	0001470681	I	62	GCGCCGCCCTGCAGGATCCGGGCTGGAAGCCTCTCGGAGTGCTGCCTCCA	1	+	65385881-65385930	1p31.3b	Homo sapiens adenylate kinase 3-like 1 (AK3L1), nuclear gene encoding mitochondrial protein, transcript variant 7, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AK4; AK3	AK4; AK3
Homo sapiens	RefSeq	NM_001002921.1	ILMN_28797	AK3L1	NM_203464.1	NM_203464.1		205	53832000	NM_203464.1	AK3L1	NP_982289.1	ILMN_1798249	0004610554	S	737	CCCGAAGCAGTTGCTGCCAGGCTAAGACAGTACAAAGACGTGGCAAAGCC	1	+	65463074-65463123	1p31.3b	Homo sapiens adenylate kinase 3-like 1 (AK3L1), nuclear gene encoding mitochondrial protein, transcript variant 7, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AK4; AK3	AK3
Homo sapiens	RefSeq	NM_001005353.1	ILMN_28797	AK3L1	NM_203464.1	NM_203464.1		205	53832000	NM_203464.1	AK3L1	NP_982289.1	ILMN_1764090	0004290192	A	1639	CTGAGAGCGATGGGGCTATATTGAATCTCTGTATGCACTGAGAACTGAGC	1	+	65465168-65465217	1p31.3b	Homo sapiens adenylate kinase 3-like 1 (AK3L1), nuclear gene encoding mitochondrial protein, transcript variant 7, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids [goid 6139] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + AMP = 2 ADP [goid 4017] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	AK4; AK3	AK4; AK3
Homo sapiens	RefSeq	XM_931922.1	ILMN_37275	LOC642816	XM_931922.1	XM_931922.1		642816	88967384	XM_931922.1	LOC642816	XP_937015.1	ILMN_1678895	0007000301	I	671	CCAGTCTCATGTTGAAGATTTTTATGTAGAAGGCCTTCCCAAAGGAATTT	3	+	199401154-199401203		PREDICTED: Homo sapiens similar to hypothetical protein LOC284701, transcript variant 1 (LOC642816), mRNA.					
Homo sapiens	RefSeq	XM_931922.1	ILMN_37275	LOC642816	XM_931922.1	XM_931922.1		642816	88967384	XM_931922.1	LOC642816	XP_937015.1	ILMN_1749776	0003190053	A	360	AGAATCCGTTTCCTGGCCGTAGAGGTGGCCTGCACTCCTCAGCTTGTGCT	3	+	199396696-199396745		PREDICTED: Homo sapiens similar to hypothetical protein LOC284701, transcript variant 1 (LOC642816), mRNA.					
Homo sapiens	RefSeq	NM_032590.3	ILMN_19365	FBXL10	NM_032590.3	NM_032590.3		84678	54112381	NM_032590.3	FBXL10	NP_115979.3	ILMN_1794260	0001190246	A	5097	TATAAGTGCCATTGTTGTAAGGTGGTGTTTCCTAGACCTTCCCTGATGCG	12	-	120351411-120351460	12q24.31b	Homo sapiens F-box and leucine-rich repeat protein 10 (FBXL10), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10799292] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10799292] [evidence NAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	CXXC2; Fbl10; JHDM1B; PCCX2	CXXC2; Fbl10; JHDM1B; PCCX2
Homo sapiens	RefSeq	NM_032590.3	ILMN_19365	FBXL10	NM_032590.3	NM_032590.3		84678	54112381	NM_032590.3	FBXL10	NP_115979.3	ILMN_1658232	0000830273	I	4076	CTGAGTTAGTCCAAGGATAAGTATGTAAATACGGGGCGGGCTCTGGGAGG	12	-	120352432-120352473:120352474-120352481	12q24.31b	Homo sapiens F-box and leucine-rich repeat protein 10 (FBXL10), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10799292] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10799292] [evidence NAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: methyl-lysine + alpha-ketoglutarate + O2 = succinate + CO2 + formaldehyde + lysine. The methyl-lysine residue is at position 36 of histone 3 [goid 51864] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	CXXC2; Fbl10; JHDM1B; PCCX2	CXXC2; Fbl10; JHDM1B; PCCX2
Homo sapiens	Unigene	Hs.141883	ILMN_77898	HS.141883	Hs.141883		Hs.141883		27824896	BX091613			ILMN_1902949	0004480424	S	285	cctcttcctcctccctgtccatcccaccctcgtccccagaaaattcctaa	10	-	17397705-17397754		BX091613 Soares_fetal_heart_NbHH19W Homo sapiens cDNA clone IMAGp998K03827 ; IMAGE:359930, mRNA sequence					
Homo sapiens	Unigene	Hs.127127	ILMN_76384	HS.127127	Hs.127127		Hs.127127		51666101	CR741873			ILMN_1826141	0002370647	S	491	TGGTCAGCTGTTAAGTGGAAAGGAGGACCGAGAGGAGGTCTGGGCTCAGC	2	+	110145697-110145746		CR741873 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGp971J0761 ; IMAGE:1507695 5, mRNA sequence					
Homo sapiens	Unigene	Hs.145985	ILMN_78276	HS.145985	Hs.145985		Hs.145985		3899697	AI277429			ILMN_1891694	0000770240	S	87	CCCGTCAGCTCAATCAGCCATCCATAAAATGTCCTCCCAAGACCAGCAGC	19	+	61422934-61422983		qm64a10.x1 Soares_placenta_8to9weeks_2NbHP8to9W Homo sapiens cDNA clone IMAGE:1893498 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015605.4	ILMN_12621	PTPN20B	NM_015605.4	NM_015605.4		26095	45243553	NM_015605.4	PTPN20B	NP_056420.3	ILMN_1798837	0007000273	S	276	CTTTGCCTTCATCAAGTCAGGAAAACACACCTAGATCAAAGGTTTTTGAA	10	-	48415441-48415450:48418651-48418690	10q11.22c	Homo sapiens protein tyrosine phosphatase, non-receptor type 20B (PTPN20B), mRNA.				DKFZp781P23155; DKFZp566K0524	DKFZp781P23155; DKFZp566K0524
Homo sapiens	RefSeq	XM_001717117.1	ILMN_343068	LOC400352	XM_001717117.1	XM_001717117.1		400352	169208770	XM_001717117.1	LOC400352	XP_001717169.1	ILMN_3285238	0001010674	M	279	TGAAGACAGTAAACAATGTAAAGAAAGCTTGAAAAGAGTGACCTTCACTT				15q13.3c	PREDICTED: Homo sapiens hypothetical LOC400352 (LOC400352), mRNA.					
Homo sapiens	RefSeq	NM_003739.4	ILMN_11871	AKR1C3	NM_003739.4	NM_003739.4		8644	24497582	NM_003739.4	AKR1C3	NP_003730.4	ILMN_1713124	0007210632	S	1111	GCCGGTGACTGGACATATCACCTCTACTTAAATCCGTCCTGTTTAGCGAC	10	+	5137829-5137869:5138602-5138610	10p15.1c	Homo sapiens aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) (AKR1C3), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities [goid 6693] [pmid 9792917] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 9792917] [evidence TAS]	Catalysis of the NADPH-dependent reduction of carbonyl compounds [goid 4033] [pmid 9792917] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NADP+ + (5Z,13E)-(15S)-9-alpha,11-alpha,15-trihydroxyprosta-5,13-dienoate = NADPH + H+ + (5Z,13E)-(15S)-9-alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate [goid 47017] [evidence IEA]; Catalysis of the reaction: NAD(P)+ + androsterone = NAD(P)H + H+ + 5-alpha-androstane-3,17-dione. The reaction is A-specific (i.e. the pro-R hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NAD(P)+ [goid 47026] [evidence IEA]; Catalysis of the reaction: NADP+ + testosterone = NADPH + H+ + androst-4-ene-3,17-dione [goid 47045] [evidence IEA]; Catalysis of the reaction: NADP+ + trans-1,2-dihydrobenzene-1,2-diol = NADPH + catechol [goid 47115] [evidence IEA]; Catalysis of the reaction: testosterone + NAD+ = androst-4-ene-3,17-dione + NADH [goid 50327] [evidence IEA]	HAKRB; hluPGFS; DD3; HSD17B5; HAKRe; KIAA0119; HA1753; DDX	HAKRB; hluPGFS; DD3; HSD17B5; HAKRe; KIAA0119; HA1753; DDX
Homo sapiens	RefSeq	NM_020431.1	ILMN_13193	TMEM63C	NM_020431.1	NM_020431.1		57156	55742804	NM_020431.1	TMEM63C	NP_065164.1	ILMN_1792094	0005690364	S	5137	ATGCCCACCTGCCTGACCCTCCACTGCCCCTGGAAGCAAAGTGCCTATCA	14	+	76795394-76795443	14q24.3c	Homo sapiens transmembrane protein 63C (TMEM63C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C14orf171	C14orf171
Homo sapiens	RefSeq	XM_932121.1	ILMN_31129	LOC202134	XM_932121.1	XM_932121.1		202134	88986241	XM_932121.1	LOC202134	XP_937214.1	ILMN_1656232	0000160280	I	231	TTCATCCAGGCCTGCGCCGGTGTTCACAGTGGTCCTCATCTAAGCCAGCC	5	+	175434265-175434314	5q35.2d	PREDICTED: Homo sapiens hypothetical protein LOC202134, transcript variant 3 (LOC202134), mRNA.					
Homo sapiens	RefSeq	XM_932121.1	ILMN_31129	LOC202134	XM_932121.1	XM_932121.1		202134	88986241	XM_932121.1	LOC202134	XP_937214.1	ILMN_1780083	0006940546	A	741	CAAGTCCTTCCTCTGCACCTGCAGAAGAAGCAACAGAAAAGACCAAAGTG	5	+	175473416-175473465	5q35.2d	PREDICTED: Homo sapiens hypothetical protein LOC202134, transcript variant 3 (LOC202134), mRNA.					
Homo sapiens	RefSeq	NR_029893.1	ILMN_388268	MIR135B	NR_029893.1	NR_029893.1		442891	262206351	NR_029893.1	MIR135B		ILMN_3308976	0001990678	S	34	GTGATTGCTGTCCCAAACTCATGTAGGGCTAAAAGCCATGGGCTACAGTG				1q32.1g	Homo sapiens microRNA 135b (MIR135B), microRNA.					
Homo sapiens	RefSeq	NM_138473.2	ILMN_23737	SP1	NM_138473.2	NM_138473.2		6667	38372900	NM_138473.2	SP1	NP_612482.2	ILMN_1676010	0002510086	S	7435	CTTCCCCCTCACCCCCCACTCTTAGGTATGTATGATGCTAATCTTGTCCC	12	+	52096271-52096320	12q13.13e	Homo sapiens Sp1 transcription factor (SP1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 3139301] [evidence IC ]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The set of physiological processes that allow an embryo or foetus to develop within the body of a female animal. It covers the time from fertilization of a female ovum by a male spermatozoon until birth [goid 7565] [pmid 2302228] [evidence NAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of global transcription from an RNA polymerase II promoter [goid 45817] [pmid 12169688] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 14580349] [evidence IDA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with double-stranded DNA [goid 3690] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 12560508] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 3139301] [evidence NAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 10816420] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [pmid 14580349] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10393239] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 12169688] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_497590.2	ILMN_42200	LOC390856	XM_938867.1	XM_938867.1		390856	89047471	XM_938867.1	LOC390856	XP_943960.1	ILMN_1700436	0002190379	A	321	TCCAGTTCCGGTTCCAGTTCAGGGTCCCAAAGGTTCCCAGTCCCCCAGAA				18q21.2c	PREDICTED: Homo sapiens similar to 60S ribosomal protein L29 (P23) (LOC390856), mRNA.					
Homo sapiens	RefSeq	XM_929505.1	ILMN_43630	LOC646569	XM_929505.1	XM_929505.1		646569	89059511	XM_929505.1	LOC646569	XP_934598.1	ILMN_1805585	0004280594	S	61	CACTTCTCTGGAATGCTCAGGAGAGCCTCTGAGCATATGGAGCTACCCTT	X	+	35639376-35639425	Xp21.1b	PREDICTED: Homo sapiens similar to melanoma antigen family B, 18 (LOC646569), mRNA.					
Homo sapiens	RefSeq	NM_005779.1	ILMN_26106	LHFPL2	NM_005779.1	NM_005779.1		10184	32698675	NM_005779.1	LHFPL2	NP_005770.1	ILMN_1747744	0000360132	S	3978	TGCTAATGCTAGACCAGTATTTAAGGGCTAATCTCACACCTCCTTAGCTG	5	-	77817210-77817259	5q14.1b	Homo sapiens lipoma HMGIC fusion partner-like 2 (LHFPL2), mRNA.				KIAA0206	KIAA0206
Homo sapiens	RefSeq	XM_932384.1	ILMN_32064	LOC653238	XM_932384.1	XM_932384.1		653238	88983605	XM_932384.1	LOC653238	XP_937477.1	ILMN_1662772	0000010121	I	625	TAGCTAAGTAGAAGTACTGCCAGGTTATTTAGGGAAATTTTAAACCAACA	5	+	68898793-68898842	5q13.2a	PREDICTED: Homo sapiens similar to TFIIH basal transcription factor complex p44 subunit (Basic transcription factor 2 44 kDa subunit) (BTF2-p44) (General transcription factor IIH polypeptide 2), transcript variant 7 (LOC653238), mRNA.					
Homo sapiens	RefSeq	NM_013242.2	ILMN_29222	C16ORF80	NM_013242.2	NM_013242.2		29105	42716281	NM_013242.2	C16orf80	NP_037374.1	ILMN_2112599	0005360630	S	1039	TGTAAGTGCAGTGGGGGTAAGCAGTCCTGTGAGTGGCGCATGAACGCTGG	16	-	58147699-58147748	16q21a	Homo sapiens chromosome 16 open reading frame 80 (C16orf80), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8688464] [evidence TAS]		EVORF; GTL3	EVORF; GTL3
Homo sapiens	RefSeq	NM_044472.1	ILMN_38161	CDC42	NM_001039802.1	NM_001039802.1		998	89903011	NM_001039802.1	CDC42	NP_001034891.1	ILMN_1675156	0001780564	A	66	AGCCGAGGAGACCCCGCGCAGTGCTGCCAACGCCCCGGTGGAGAAGCTGA	1	+	22251772-22251821	1p36.12a	Homo sapiens cell division cycle 42 (GTP binding protein, 25kDa) (CDC42), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11260256] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16407834] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14505571] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11260256] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [pmid 11035016] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The directed movement of the nucleus [goid 7097] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The directed movement of the nucleus [goid 7097] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 11260256] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 11035016] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [pmid 11260256] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia [goid 31274] [pmid 11035016] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein complex assembly [goid 31333] [pmid 11584266] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 11035016] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11035016] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10587647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10816584] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11035016] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IEA]	CDC42Hs; G25K	CDC42Hs; G25K
Homo sapiens	RefSeq	NM_001791.2	ILMN_38161	CDC42	NM_001039802.1	NM_001039802.1		998	89903011	NM_001039802.1	CDC42	NP_001034891.1	ILMN_1738424	0005270386	I	1859	GAGGGGTGGTGCTAGAAGACAGACATCTGTGGAATGATTCACATCCTCTC	1	+	22291588-22291637	1p36.12a	Homo sapiens cell division cycle 42 (GTP binding protein, 25kDa) (CDC42), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11260256] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16407834] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14505571] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11260256] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [pmid 11035016] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The directed movement of the nucleus [goid 7097] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The directed movement of the nucleus [goid 7097] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 11260256] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 11035016] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [pmid 11260256] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia [goid 31274] [pmid 11035016] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein complex assembly [goid 31333] [pmid 11584266] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 11035016] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11035016] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10587647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10816584] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11035016] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IEA]	CDC42Hs; G25K	CDC42Hs; G25K
Homo sapiens	RefSeq	NM_001039802.1	ILMN_38161	CDC42	NM_001039802.1	NM_001039802.1		998	89903011	NM_001039802.1	CDC42	NP_001034891.1	ILMN_2408139	0000580168	A	3	TTCCGCGGGCACCCAACTGTGCGTCTCCTGCGCGCTGACGTCAGGTGCGT	1	+	22251709-22251758	1p36.12a	Homo sapiens cell division cycle 42 (GTP binding protein, 25kDa) (CDC42), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11260256] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16407834] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14505571] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11260256] [evidence IDA]; Thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone; usually approximately 0.1 um wide, 5-10 um long, can be up to 50 um long in axon growth cones; contains a loose bundle of about 20 actin filaments oriented with their plus ends pointing outward [goid 30175] [pmid 11035016] [evidence IDA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The directed movement of the nucleus [goid 7097] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; The directed movement of the nucleus [goid 7097] [evidence IEA]; Any cellular process that results in the specification, formation or maintenance of anisotropic intracellular organization or cell growth patterns [goid 7163] [pmid 11260256] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 11035016] [evidence IDA]; The process whereby a relatively unspecialized monocyte acquires the specialized features of a macrophage [goid 30225] [pmid 11260256] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia [goid 31274] [pmid 11035016] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of protein complex assembly [goid 31333] [pmid 11584266] [evidence IPI]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 11035016] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11035016] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10587647] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10816584] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11035016] [evidence IPI]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [evidence IEA]	CDC42Hs; G25K	CDC42Hs; G25K
Homo sapiens	RefSeq	NM_213607.1	ILMN_8897	CCDC103	NM_213607.1	NM_213607.1		388389	47106051	NM_213607.1	CCDC103	NP_998772.1	ILMN_1791905	0006770463	S	1084	GCCCACTGGCCTTGAGAGATGAGTGTGTGCCCAACCAAATGCTGGCTATA	17	+	40335983-40336032	17q21.31d	Homo sapiens coiled-coil domain containing 103 (CCDC103), mRNA.				FLJ13094; FLJ34211	FLJ13094; FLJ34211
Homo sapiens	RefSeq	NM_000851.2	ILMN_15670	GSTM5	NM_000851.2	NM_000851.2		2949	23065562	NM_000851.2	GSTM5	NP_000842.2	ILMN_1750790	0002940554	S	1358	GAAAGGTGCTCTGTGCCAAGTTCCTCACTCATTCGCGCTCCTGTAGGCCG	1	+	110062202-110062251	1p13.3b	Homo sapiens glutathione S-transferase M5 (GSTM5), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: R-X + glutathione = H-X + R-S-glutathione. R may be an aliphatic, aromatic or heterocyclic group; X may be a sulfate, nitrile or halide group [goid 4364] [pmid 8473333] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GTM5; GSTM5-5	GTM5; GSTM5-5
Homo sapiens	RefSeq	NM_006761.3	ILMN_18524	YWHAE	NM_006761.3	NM_006761.3		7531	34304385	NM_006761.3	YWHAE	NP_006752.1	ILMN_1807535	0000510619	I	4	ATTGAGGCGCCGCCATTTTTGCTGCCCGGACGCGGAGCGAGAGGCTGAGA	17	-	1250214-1250263	17p13.3e	Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide (YWHAE), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif [goid 6605] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 7644510] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any enzyme [goid 19899] [pmid 10788521] [evidence IPI]; Interacting selectively with a specific domain of a protein [goid 19904] [evidence IEA]	KCIP-1; MDS; FLJ45465; MDCR; 14-3-3E	KCIP-1; MDS; FLJ45465; MDCR; 14-3-3E
Homo sapiens	RefSeq	NM_001006937.1	ILMN_1896	TCEAL4	NM_001006937.1	NM_001006937.1		79921	55749458	NM_001006937.1	TCEAL4	NP_001006938.1	ILMN_1748625	0004920487	A	939	GCATCCCTCCTGTTGCTAGCAGCCTTTTGACCTATCTGCAATGCAGTGTT	X	+	102728969-102729018	Xq22.2a	Homo sapiens transcription elongation factor A (SII)-like 4 (TCEAL4), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	FLJ21174; NPD017; DKFZp686M0279	FLJ21174; NPD017; DKFZp686M0279
Homo sapiens	RefSeq	XM_001129280.2	ILMN_168360	LOC729086	XM_001129280.2	XM_001129280.2		729086	169161066	XM_001129280.2	LOC729086	XP_001129280.1	ILMN_3230435	0004480170	I	2861	TCTTTTTTGTTCTCTTTTGATAGGATCCTGTTTCCTATGTGTGCAAAATA	1	+	146562658-146562707	1q21.1d	PREDICTED: Homo sapiens similar to EGFR-coamplified and overexpressed protein (LOC729086), mRNA.					
Homo sapiens	RefSeq	XM_001129280.2	ILMN_168360	LOC729086	XM_001129280.2	XM_001129280.2		729086	169161066	XM_001129280.2	LOC729086	XP_001129280.1	ILMN_3220718	0005700091	A	1613	CTGAAGGGTGCTTTCAAAACAGGGGGCACATCTGGCTGGGAAGTCACATG	1	+	146561410-146561459	1q21.1d	PREDICTED: Homo sapiens similar to EGFR-coamplified and overexpressed protein (LOC729086), mRNA.					
Homo sapiens	RefSeq	NM_001008541.1	ILMN_1042	MXI1	NM_001008541.1	NM_001008541.1		4601	57242783	NM_001008541.1	MXI1	NP_001008541.1	ILMN_1663497	0006900754	I	26	AATCTGCCAGCCCCCGAGAGGGGTTTGGAACCTTAGCACCCAAGTCTAAG	10	+	111960004-111960053	10q25.2a	Homo sapiens MAX interactor 1 (MXI1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8425219] [evidence TAS]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9624006] [evidence TAS]; The selective interaction of a transcription factor with specific molecules in the cytoplasm, thereby inhibiting its translocation into the nucleus [goid 42994] [pmid 8425219] [evidence TAS]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 8425219] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 8425219] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	MAD2; MXI; MGC43220; MXD2	MAD2; MXI; MGC43220; MXD2
Homo sapiens	RefSeq	NM_019110.3	ILMN_29823	ZKSCAN4	NM_019110.3	NM_019110.3		387032	34147476	NM_019110.3	ZKSCAN4	NP_061983.2	ILMN_1804571	0003390053	S	2151	GGCCTTCTGGACTTGTTAATTGCCCTCAGCCAGCACTTTAGGACATCTGG	6	-	28320554-28320603	6p22.1b	Homo sapiens zinc finger with KRAB and SCAN domains 4 (ZKSCAN4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ32136; ZNF307; p373c6.1; P1P373C6	FLJ32136; ZNF307; p373c6.1; P1P373C6
Homo sapiens	RefSeq	NM_032532.1	ILMN_17340	FNDC1	NM_032532.2	NM_032532.2		84624	148806907	NM_032532.2	FNDC1	NP_115921.2	ILMN_1734653	0002340309	S	6019	GGCCATTCTGGTCATCTCAGTCTGGAACTCAGTCCCACTTCTTGGCCTGG	6	+	159608889-159608938	6q25.3e	Homo sapiens fibronectin type III domain containing 1 (FNDC1), mRNA.				bA243O10.1; AGS8; RP11-243O10.2; KIAA1866; MEL4B3; dJ322A24.1; FNDC2	bA243O10.1; AGS8; RP11-243O10.2; KIAA1866; MEL4B3
Homo sapiens	RefSeq	XM_001720672.1	ILMN_346410	LOC729394	XM_001720672.1	XM_001720672.1		729394	169172867	XM_001720672.1	LOC729394	XP_001720724.1	ILMN_3244750	0006510626	S	420	GATATCCCCGCCTAGATCTTTCAGTGAGTCTCTGCCTCAGCTACTCTTAG	8	-	7653716-7653765	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC729394 (LOC729394), mRNA.					
Homo sapiens	RefSeq	NM_080797.2	ILMN_17046	DIDO1	NM_080797.2	NM_080797.2		11083	71044476	NM_080797.2	DIDO1	NP_542987.2	ILMN_1763605	0005390707	I	7303	GGGCAGGAGGAAACACCGCCCTCTGTAGCTGCTCGAATGGAAAGGGCTCT	20	-	61518826-61518875	20q13.33d	Homo sapiens death inducer-obliterator 1 (DIDO1), transcript variant 3, mRNA.				dJ885L7.8; DIDO3; DATF1; MGC16140; FLJ11265; DIO1; DKFZp434P1115; C20orf158; KIAA0333; DIO-1; BYE1; DIDO2	dJ885L7.8; DIDO3; DATF1; MGC16140; FLJ11265; DIO1; DKFZp434P1115; C20orf158; KIAA0333; DIO-1; BYE1; DIDO2
Homo sapiens	RefSeq	NM_000573.3	ILMN_40785	CR1	NM_000573.3	NM_000573.3		1378	86793035	NM_000573.3	CR1	NP_000564.2	ILMN_2388112	0001050025	A	6458	AACCCCCACCCTTCTGCCTCGTGCTAAACGCACACAGTATCTAGTCAGGG	1	+	205879575-205879624	1q32.2a	Homo sapiens complement component (3b/4b) receptor 1 (Knops blood group) (CR1), transcript variant F, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2972794] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with any component or product of the complement cascade to initiate a change in cell activity [goid 4875] [pmid 2972794] [evidence TAS]	C3BR; CD35; KN	C3BR; CD35; KN
Homo sapiens	RefSeq	NM_001035260.1	ILMN_23384	VPS26A	NM_001035260.1	NM_001035260.1		9559	78482613	NM_001035260.1	VPS26A	NP_001030337.1	ILMN_2344850	0001580035	A	2298	GGAACCAACTTTACTGGCAAAAGGGTCCATGTACCACCATGTGCTGGAGC	10	+	70602362-70602411	10q21.3e	Homo sapiens vacuolar protein sorting 26 homolog A (S. pombe) (VPS26A), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11102511] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]; A conserved multimeric membrane-associated complex involved in retrograde transport from endosomes to the Golgi apparatus. For example, the budding yeast retromer comprises Vps35p, Vps29p, Vps26p, Vps5p, and Vps17p [goid 30904] [evidence IEA]	The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport [goid 42147] [pmid 11102511] [evidence NAS]; The directed movement of substances into, out of or within a vacuole [goid 7034] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11102511] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 11102511] [evidence NAS]	PEP8A; Hbeta58; VPS26; HB58; FLJ12930	VPS26; HB58; PEP8A; Hbeta58; FLJ12930
Homo sapiens	RefSeq	NM_173636.3	ILMN_308921	WDR62	NM_001083961.1	NM_001083961.1		284403	145580607	NM_001083961.1	WDR62	NP_001077430.1	ILMN_1673073	0003710026	S	4369	CACCTTCCAAGAAGCCCTCGACCTTTACCGTGTGTTGGTCTCCAGTGGCC	19	+	36595544-36595577:36595670-36595685	19q13.12b	Homo sapiens WD repeat domain 62 (WDR62), transcript variant 1, mRNA.				FLJ33298; DKFZp686G1024; DKFZP434J046; MGC166976; C19orf14	FLJ33298; DKFZp686G1024; DKFZP434J046; C19orf14
Homo sapiens	RefSeq	XR_038367.1	ILMN_349138	LOC100132769	XR_038367.1	XR_038367.1		100132769	169169957	XR_038367.1	LOC100132769		ILMN_3246839	0004810356	S	356	CCCAGGACTCACAGTACCCCCTGAGAACATGGACAGTATGTGGGGGTAGC	7	+	59349-59398	7p22.3d	PREDICTED: Homo sapiens misc_RNA (LOC100132769), miscRNA.					
Homo sapiens	RefSeq	NM_152999.2	ILMN_18795	STEAP2	NM_152999.2	NM_152999.2		261729	25092600	NM_152999.2	STEAP2	NP_694544.1	ILMN_1809101	0000290292	S	6266	GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCT	7	+	89704274-89704323	7q21.13b	Homo sapiens six transmembrane epithelial antigen of the prostate 2 (STEAP2), mRNA.	Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 12095985] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12095985] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12095985] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [pmid 12095985] [evidence IDA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 12095985] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized [goid 42598] [pmid 12095985] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence ISS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A vesicle that mediates transport between the trans-Golgi network and other parts of the cell [goid 30140] [evidence ISS]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized [goid 42598] [evidence ISS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of iron (Fe) ions into, out of, within or between cells [goid 6826] [evidence IEA]; The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis [goid 6893] [pmid 12095985] [evidence IDA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 12095985] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [pmid 12095985] [evidence IDA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; A process of exocytosis in which soluble proteins and other substances are initially stored in secretory vesicles for later release. It is found mainly in cells that are specialized for secreting products such as hormones, neurotransmitters, or digestive enzymes rapidly on demand [goid 45055] [pmid 12095985] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis [goid 6893] [evidence ISS]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence ISS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence ISS]; A process of exocytosis in which soluble proteins and other substances are initially stored in secretory vesicles for later release. It is found mainly in cells that are specialized for secreting products such as hormones, neurotransmitters, or digestive enzymes rapidly on demand [goid 45055] [evidence ISS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 12095985] [evidence IDA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence ISS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	STMP; PCANAP1; STAMP1; IPCA1; IPCA-1	STMP; PCANAP1; STAMP1; IPCA1; IPCA-1
Homo sapiens	RefSeq	XM_001715214.1	ILMN_346191	TIMM23B	XM_001715214.1	XM_001715214.1		653252	169194837	XM_001715214.1	TIMM23B	XP_001715266.1	ILMN_3226669	0002570450	A	163	CGGCAACAAAACCACAGGGGGATTGGCCGGCTTTTTCGGAGCCGGCGGAG				10q11.23a	PREDICTED: Homo sapiens translocase of inner mitochondrial membrane 23 homolog B (yeast) (TIMM23B), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; The protein transport machinery of the mitochondrial inner membrane that contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor [goid 5744] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated [goid 15450] [evidence IEA]		
Homo sapiens	Unigene	Hs.201600	ILMN_81683	HS.201600	Hs.201600		Hs.201600		4898184	AI686890			ILMN_1871903	0001570253	S	234	GTCCTTCACACATTCACAGTGTTGGCCGACTATAGACTCTTCAGAACCAG	4	-	187244584-187244633		tp90h02.x1 NCI_CGAP_Ut3 Homo sapiens cDNA clone IMAGE:2206611 3, mRNA sequence					
Homo sapiens	RefSeq	NM_178126.2	ILMN_805	FAM134C	NM_178126.2	NM_178126.2		162427	31342405	NM_178126.2	FAM134C	NP_835227.1	ILMN_1666449	0002650010	S	3554	CAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCG	17	-	37985214-37985263	17q21.31a	Homo sapiens family with sequence similarity 134, member C (FAM134C), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ33806	FLJ33806
Homo sapiens	RefSeq	NM_206921.1	ILMN_23718	C6ORF204	NM_206921.2	NM_206921.2		387119	109715848	NM_206921.2	C6orf204	NP_996804.2	ILMN_1793559	0002230010	S	1745	CCCACCTGCATGAGAGGATAAGGGATAATGAATTACGGGCTCAACATGCC	6	-	118972834-118972883	6q22.31a	Homo sapiens chromosome 6 open reading frame 204 (C6orf204), transcript variant 2, mRNA.				MGC131785; RP11-57K17.2; bA57K17.2; NY-BR-15	RP11-57K17.2; bA57K17.2; NY-BR-15
Homo sapiens	RefSeq	NM_001017424.1	ILMN_172395	KCNK2	NM_001017424.2	NM_001017424.2		3776	126365744	NM_001017424.2	KCNK2	NP_001017424.1	ILMN_1666656	0003400343	I	288	GACTCTGTTTTGGAAATTACGGACAAGAAACCTTGGAGGAAGAACGGCAT	1	+	213245795-213245844	1q41a	Homo sapiens potassium channel, subfamily K, member 2 (KCNK2), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 15271] [evidence NAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	hTREK-1e; MGC126742; hTREK-1c; TREK; TPKC1; MGC126744; TREK1; TREK-1; K2p2.1	MGC126742; hTREK-1c; TREK; TPKC1; MGC126744; TREK1; TREK-1
Homo sapiens	RefSeq	NM_032513.3	ILMN_5707	SLC30A2	NM_032513.3	NM_032513.3		7780	52352806	NM_032513.3	SLC30A2	NP_115902.1	ILMN_2415421	0006020739	A	2198	CAAGGTCTGTCTCTGCCATTGTAAGCAAGTGCCTTGGGCGAGCTGGCCTC	1	-	26364592-26364641	1p36.11b	Homo sapiens solute carrier family 30 (zinc transporter), member 2 (SLC30A2), transcript variant 2, mRNA.	A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of functions. They can act as a storage organelle for nutrients or waste products, as a degradative compartment, as a cost-effective way of increasing cell size, and as a homeostatic regulator controlling both turgor pressure and pH of the cytosol [goid 5773] [evidence IEA]; The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell [goid 5774] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	FLJ36708; ZnT-2; MGC11303; PP12488; ZNT2	FLJ36708; ZnT-2; MGC11303; PP12488; ZNT2
Homo sapiens	RefSeq	NR_004382.1	ILMN_351759	MESTIT1	NR_004382.1	NR_004382.1		317751	161087002	NR_004382.1	MESTIT1		ILMN_3237149	0000520139	S	2727	GGCTGTAAAAAGCTCAAAAGATGAGTGGCAGACGAGGGAAGCAGTGGAAC	7	-	130127363-130127412		Homo sapiens MEST intronic transcript 1 (non-protein coding) (MESTIT1), non-coding RNA.				PEG1-AS	PEG1-AS
Homo sapiens	RefSeq	NM_005446.3	ILMN_182773	P2RX6	NM_005446.3	NM_005446.3		9127	157419147	NM_005446.3	P2RX6	NP_005437.2	ILMN_3243924	0002340706	S	2658	GGCCCAGAGGAAGCTGATGTCATGGCTGGACAAAGTCACGGAGTAAAGCC	22	+	19712238-19712287	22q11.21e	Homo sapiens purinergic receptor P2X, ligand-gated ion channel, 6 (P2RX6), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12088286] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9242461] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [pmid 12088286] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9242461] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9242461] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Combining with a purine nucleotide to initiate a change in cell activity [goid 1614] [pmid 12088286] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9242461] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a channel that opens when extracellular ATP has been bound by the channel complex or one of its constituent parts [goid 4931] [pmid 12088286] [evidence NAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [pmid 9242461] [evidence TAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 17895406] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	P2RX6; P2XM; MGC129625; P2X6	P2RX6; P2XM; MGC129625; P2X6
Homo sapiens	RefSeq	XM_941544.3	ILMN_34241	C6ORF132	XM_941544.3	XM_941544.3		647024	169168695	XM_941544.3	C6orf132	XP_946637.3	ILMN_3252665	0000070242	M	576	TTCGGGAAGAAGCACACCACGACCCCCAGCACCTCCCTCTACGCCACCAA				6p21.1f	PREDICTED: Homo sapiens chromosome 6 open reading frame 132 (C6orf132), mRNA.					
Homo sapiens	RefSeq	XM_944349.1	ILMN_30752	LOC286094	XM_944349.1	XM_944349.1		286094	89028930	XM_944349.1	LOC286094	XP_949442.1	ILMN_1728125	0005090349	A	800	CCTGGCTTTCCGCTTCGGAGCACTCTCTCAACTTCAACACAGAGAAGTGA				8q24.22d	PREDICTED: Homo sapiens hypothetical protein LOC286094 (LOC286094), mRNA.					
Homo sapiens	RefSeq	NM_016944.1	ILMN_14113	TAS2R4	NM_016944.1	NM_016944.1		50832	8394401	NM_016944.1	TAS2R4	NP_058640.1	ILMN_1745038	0001470114	S	733	GCTACCCTGGTCCAGTATCTCCCCTTTTATGCAGGGATGGATATGGGGAC	7	+	141125490-141125539	7q34e	Homo sapiens taste receptor, type 2, member 4 (TAS2R4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10761934] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10761934] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [pmid 10761934] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 10761934] [evidence TAS]	MGC163311; T2R4	MGC163311; T2R4
Homo sapiens	RefSeq	NM_001012753.1	ILMN_10759	ZNF763	NM_001012753.1	NM_001012753.1		284390	61676196	NM_001012753.1	ZNF763	NP_001012771.1	ILMN_1727183	0007210433	S	2478	AGGCGTGGTGGCCTGCTTCTGTAATCCTAGCTAGTTGGGAGGCTGGCACA	19	+	11952053-11952102	19p13.2a	Homo sapiens zinc finger protein 763 (ZNF763), mRNA.				ZNF; ZNF440L	ZNF; ZNF440L
Homo sapiens	RefSeq	NM_001034842.2	ILMN_3679	PTCHD3	NM_001034842.2	NM_001034842.2		374308	116686094	NM_001034842.2	PTCHD3	NP_001030014.1	ILMN_2054481	0004830095	S	2273	TCATTTCTTCCCGGGGCTTCATTCAGACAACAGATGTTTCTTCCTCAGCC	10	-	27727252-27727301	10p12.1a	Homo sapiens patched domain containing 3 (PTCHD3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with the hedgehog protein to initiate a change in cell activity [goid 8158] [evidence IEA]	MGC129888; PTR; FLJ44037	MGC129888; PTR; FLJ44037
Homo sapiens	RefSeq	XM_928722.1	ILMN_39528	LOC645711	XM_928722.1	XM_928722.1		645711	88942496	XM_928722.1	LOC645711	XP_933815.1	ILMN_1801962	0002070364	S	384	ATCATGTTCGGACCCCCAGGCCAGCCCACTGCTGCTCCTTGGCACTTTCA	1	-	16819274-16819323		PREDICTED: Homo sapiens similar to ciliary rootlet coiled-coil, rootletin (LOC645711), mRNA.					
Homo sapiens	RefSeq	NM_001001683.1	ILMN_28291	MED11	NM_001001683.2	NM_001001683.2		400569	142349513	NM_001001683.2	MED11	NP_001001683.1	ILMN_1762639	0007560075	S	537	GGACAAAGGGGCAAATGGTGGGCATGGAAAAACTGAAGCCCGAGCCTGCC	17	+	4583352-4583401	17p13.2c	Homo sapiens mediator complex subunit 11 (MED11), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 14638676] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12584197] [evidence IPI]	HSPC296; MGC88387	HSPC296; MGC88387
Homo sapiens	RefSeq	Hs.135435	ILMN_171208	LOC152742	XM_001131702.1	XM_001131702.1		152742	113416009	XM_001131702.1	LOC152742	XP_001131702.1	ILMN_1843138	0007160427	S	1318	TGACATCCTAGAGTGGAAAAGCAACCTGGGTTTCCGAGACTGTTTTACTC				4p15.33b	PREDICTED: Homo sapiens hypothetical protein LOC152742 (LOC152742), mRNA.					
Homo sapiens	RefSeq	NM_002056.1	ILMN_5797	GFPT1	NM_002056.1	NM_002056.1		2673	4503980	NM_002056.1	GFPT1	NP_002047.1	ILMN_2220184	0004920156	S	2434	GAATGCTGGGTGTTGCATTTCTGGACCCTCCACTTCAATCTGAGAAGACA	2	-	69406509-69406558	2p14a	Homo sapiens glutamine-fructose-6-phosphate transaminase 1 (GFPT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism [goid 6002] [pmid 8144040] [evidence TAS];  [goid 6112] [pmid 1460020] [evidence TAS]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]	Catalysis of the reaction: L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate [goid 4360] [pmid 8144040] [evidence TAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GFA; GFPT; GFAT; GFAT1; GFAT1m	GFA; GFPT; GFAT; GFAT1; GFAT1m
Homo sapiens	RefSeq	NM_002056.1	ILMN_5797	GFPT1	NM_002056.1	NM_002056.1		2673	4503980	NM_002056.1	GFPT1	NP_002047.1	ILMN_2220187	0002350053	S	2910	GATGGGATGTGTACATGTTGGGTATCCTACTACTTTGTGTTTTCATCTCC	2	-	69406033-69406082	2p14a	Homo sapiens glutamine-fructose-6-phosphate transaminase 1 (GFPT1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving fructose 6-phosphate, also known as F6P. The D-enantiomer is an important intermediate in glycolysis, gluconeogenesis, and fructose metabolism [goid 6002] [pmid 8144040] [evidence TAS];  [goid 6112] [pmid 1460020] [evidence TAS]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y [goid 16051] [evidence IEA]	Catalysis of the reaction: L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate [goid 4360] [pmid 8144040] [evidence TAS]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	GFA; GFPT; GFAT; GFAT1; GFAT1m	GFA; GFPT; GFAT; GFAT1; GFAT1m
Homo sapiens	RefSeq	NM_001001685.1	ILMN_8905	FLJ45079	NM_001001685.1	NM_001001685.1		400624	48717375	NM_001001685.1	FLJ45079	NP_001001685.1	ILMN_1754132	0002600427	S	4185	TTGGCAAAGGTCAGGCAGGGGCTGGGAAAGCATTAGGTGGACCAGGCATG	17	-	73387147-73387196	17q25.3a	Homo sapiens FLJ45079 protein (FLJ45079), mRNA.				FLJ46474	FLJ46474
Homo sapiens	Unigene	Hs.560290	ILMN_114147	HS.560290	Hs.560290		Hs.560290		5053244	AI732109			ILMN_1892793	0003360612	S	2	CGTCGACACTGGAAGTCCTAGCCAGAGTAATCAGGCAAGGAAAATAAATA					nk03e12.x5 NCI_CGAP_Pr11 Homo sapiens cDNA clone IMAGE:1000942 similar to contains L1.b2 L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_001018677.1	ILMN_13623	FNTA	NM_001018677.1	NM_001018677.1		2339	66882531	NM_001018677.1	FNTA	NP_001018197.1	ILMN_2374191	0006130019	A	1157	GCTCTAAGTAATGTGATTCTTCTAAAGCAAAGTCATTGGATGGGAGGAGG	8	+	42940595-42940644	8p11.21a	Homo sapiens farnesyltransferase, CAAX box, alpha (FNTA), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8599089] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11313965] [evidence EXP]	The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 8599089] [evidence TAS]; The covalent attachment of a farnesyl moiety to a protein amino acid [goid 18347] [pmid 8494894] [evidence TAS]; The covalent attachment of a geranylgeranyl moiety to a protein amino acid [goid 18348] [pmid 8106351] [evidence TAS]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]	Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein [goid 8318] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [pmid 8276393] [evidence TAS]; Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families [goid 4662] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15170324] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed [goid 30548] [evidence IEA]	FPTA; MGC99680; PGGT1A	FPTA; MGC99680; PGGT1A
Homo sapiens	RefSeq	NM_002027.2	ILMN_13623	FNTA	NM_001018677.1	NM_001018677.1		2339	66882531	NM_001018677.1	FNTA	NP_001018197.1	ILMN_1721704	0006550341	A	1054	CGAGAGTGGTCCTTCCCTTTGCCTGTGGTGTAAAAGTGCATCACACAGGT	8	+	42940492-42940541	8p11.21a	Homo sapiens farnesyltransferase, CAAX box, alpha (FNTA), transcript variant 3, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8599089] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11313965] [evidence EXP]	The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 8599089] [evidence TAS]; The covalent attachment of a farnesyl moiety to a protein amino acid [goid 18347] [pmid 8494894] [evidence TAS]; The covalent attachment of a geranylgeranyl moiety to a protein amino acid [goid 18348] [pmid 8106351] [evidence TAS]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]	Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein [goid 8318] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [pmid 8276393] [evidence TAS]; Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families [goid 4662] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15170324] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed [goid 30548] [evidence IEA]	FPTA; MGC99680; PGGT1A	FPTA; MGC99680; PGGT1A
Homo sapiens	RefSeq	NM_016396.1	ILMN_6119	CTDSPL2	NM_016396.1	NM_016396.1		51496	7705460	NM_016396.1	CTDSPL2	NP_057480.1	ILMN_1665655	0000360682	S	2661	CCTGTGGCGCAGTACACTCCCAAGCCACCAATGCAGTTAATATGCTCTCA	15	+	42604756-42604805	15q15.3c	Homo sapiens CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 (CTDSPL2), mRNA.			Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ10523; HSPC129; HSPC058	HSPC129; FLJ10523; HSPC058
Homo sapiens	RefSeq	NM_004481.2	ILMN_2160	GALNT2	NM_004481.2	NM_004481.2		2590	9945385	NM_004481.2	GALNT2	NP_004472.1	ILMN_1814606	0005690500	S	3973	GGGCCGGGGAGGGGTCCTTTGCGGTGAGCTATGTTTACATTGACACAGTG	1	+	228484084-228484133	1q42.13f	Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) (GALNT2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The set of thin, flattened membrane-bounded compartments, called cisternae, that form the central portion of the Golgi complex. The stack usually comprises cis, medial, and trans cisternae; the cis- and trans-Golgi networks are not considered part of the stack [goid 5795] [pmid 9852147] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [pmid 9852147] [evidence NAS]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 12506059] [evidence IDA]	The chemical reactions and pathways resulting in the formation of immunoglobulin [goid 2378] [pmid 12438318] [evidence IDA]; The posttranslational glycosylation of protein via the O3 atom of peptidyl-serine, forming O3-glycosyl-L-serine; the most common forms are N-acetylgalactosaminyl, mannosyl, galactosyl, and xylosyl serine [goid 18242] [pmid 9295285] [evidence IDA]; The posttranslational glycosylation of protein via the O3 atom of peptidyl-serine, forming O3-glycosyl-L-serine; the most common forms are N-acetylgalactosaminyl, mannosyl, galactosyl, and xylosyl serine [goid 18242] [pmid 12438318] [evidence IDA]; The posttranslational glycosylation of protein via the O3 atom of peptidyl-threonine, forming O3-glycosyl-L-threonine; the most common forms are N-acetylgalactosaminyl, mannosyl, and galactosyl threonine [goid 18243] [pmid 9295285] [evidence IDA]; The posttranslational glycosylation of protein via the O3 atom of peptidyl-threonine, forming O3-glycosyl-L-threonine; the most common forms are N-acetylgalactosaminyl, mannosyl, and galactosyl threonine [goid 18243] [pmid 12438318] [evidence IDA]	Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. Catalyzes of the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis [goid 4653] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	GalNAc-T2	GalNAc-T2
Homo sapiens	RefSeq	NM_019056.2	ILMN_29504	NDUFB11	NM_019056.3	NM_019056.3		54539	142371100	NM_019056.3	NDUFB11	NP_061929.2	ILMN_1749709	0005550377	S	733	GAAAGAGTGGTCCCGCCGCGAAGCTGAGAGGCTTGTGAAATACCGAGAGG	X	-	46886728-46886777	Xp11.3a	Homo sapiens NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa (NDUFB11), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The protein complexes that form the mitochondrial electron transport system (the respiratory chain), associated with the inner mitochondrial membrane. Complexes I, III and IV can transport protons if embedded in an oriented membrane, such as an intact mitochondrial inner membrane [goid 5746] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]		P17.3; MGC111182; FLJ20494; ESSS; Np15; NP17.3	P17.3; MGC111182; FLJ20494; ESSS; Np15; NP17.3
Homo sapiens	RefSeq	XM_938789.1	ILMN_307863	LOC653702	NM_001093763.1	NM_001093763.1		653702	148226044	NM_001093763.1	LOC653702	NP_001087232.1	ILMN_1658531	0007610608	A	435	CATATATTGCATGGAGGTACCCCAATCTGAAGTCAGTAAATGAACTAATC				1p21.3c	Homo sapiens hCG31916 (LOC653702), mRNA.					
Homo sapiens	RefSeq	NM_203441.2	ILMN_29795	C10ORF4	NM_203441.2	NM_203441.2		118924	50409592	NM_203441.2	C10orf4	NP_982265.2	ILMN_2375141	0000780491	A	2116	CATGCAAATATGAATATACCTCTGATATGGTTTGGCTCTGTGTCCCCACC	10	-	95418601-95418650	10q23.33b	Homo sapiens chromosome 10 open reading frame 4 (C10orf4), transcript variant FRA10AC1-2, mRNA.				FRA10AC1; F26C11.1-like	FRA10AC1; F26C11.1-like
Homo sapiens	RefSeq	NM_133638.2	ILMN_8089	ADAMTS19	NM_133638.2	NM_133638.2		171019	73695938	NM_133638.2	ADAMTS19	NP_598377.2	ILMN_1656171	0000070487	S	4842	GAGTGAACTGCCTTGGAAGATAGTATGTCTCTTGGGAGCAAAGGGCAAAC	5	+	129102028-129102077	5q23.3b-q23.3c	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 19 (ADAMTS19), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_048362.9	ILMN_307244	KIAA1543	NM_020902.1	NM_020902.1		57662	130502139	NM_020902.1	KIAA1543	NP_065953.1	ILMN_1809208	0006040356	A	3777	TTCACCATCCAGGGACACCTCTGGCAGGGCAAGAAACCCACCACTCCCAA	19	+	7588869-7588918	19p13.2e	Homo sapiens KIAA1543 (KIAA1543), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	XM_001724370.1	ILMN_341895	LOC100134230	XM_001724370.1	XM_001724370.1		100134230	169161475	XM_001724370.1	LOC100134230	XP_001724422.1	ILMN_3241173	0001570368	S	834	CCAGGCCTAGTGATTCCAGCCTCTGAGCTAACGGGTCTGTAAAAAGTTAC					PREDICTED: Homo sapiens hypothetical protein LOC100134230 (LOC100134230), mRNA.					
Homo sapiens	Unigene	Hs.474880	ILMN_95366	HS.474880	Hs.474880		Hs.474880		24270893	BC038752			ILMN_1907451	0000380326	S	1148	CCAACATTTCAGCCAGAGGAGGGCAGGACGCTTAGGACCCATTGCCAGTG	22	-	38769266-38769315		Homo sapiens cDNA clone IMAGE:5269351					
Homo sapiens	RefSeq	NM_201649.2	ILMN_162404	SLC6A9	NM_201649.2	NM_201649.2		6536	67782314	NM_201649.2	SLC6A9	NP_964012.2	ILMN_2252701	0000460112	I	375	GCATGGGGCCTACAACTCTGGTCTCCTTCCCCAACTCATGGCCCAGCACT	1	-	44477249-44477298	1p34.1f	Homo sapiens solute carrier family 6 (neurotransmitter transporter, glycine), member 9 (SLC6A9), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8183239] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8183239] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells [goid 6865] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + Na+(out) = amino acid(in) + Na+(in) [goid 5283] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in) [goid 5328] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycine(out) + Na+(out) = glycine(in) + Na+(in) [goid 15375] [pmid 8183239] [evidence TAS]	DKFZp547A1118; GLYT1	GLYT1; DKFZp547A1118
Homo sapiens	RefSeq	NM_001039615.1	ILMN_40407	LOC440053	NM_001039615.1	NM_001039615.1		440053	88853872	NM_001039615.1	LOC440053	NP_001034704.1	ILMN_2084912	0004890148	S	1295	GGCCTTCAGTCTGTCTTCCGACCTTAGATGACATGAGAGAACACGCACTG					Homo sapiens similar to zinc finger protein 75 (LOC440053), mRNA.					
Homo sapiens	RefSeq	NM_000903.2	ILMN_27575	NQO1	NM_000903.2	NM_000903.2		1728	70995356	NM_000903.2	NQO1	NP_000894.1	ILMN_1720282	0005360347	A	2435	GGCACTGGTGGTTTTTGCTCTCGACAGTATCCACAATAGCTGACGGCTGG	16	-	69743410-69743459	16q22.1e	Homo sapiens NAD(P)H dehydrogenase, quinone 1 (NQO1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 2843525] [evidence TAS]	The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [pmid 10393963] [evidence TAS]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [pmid 9579781] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine [goid 7271] [pmid 9579781] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [pmid 10393963] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)(+) + a hydroquinone [goid 3955] [pmid 10393963] [evidence TAS]; Catalysis of the reaction: NADH + H+ + 2 ferricytochrome b(5) = NAD+ + 2 ferrocytochrome b(5) [goid 4128] [pmid 9579781] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]	NMOR1; NMORI; DHQU; DIA4; DTD; QR1	NMOR1; NMORI; DHQU; DIA4; DTD; QR1
Homo sapiens	RefSeq	NM_003619.2	ILMN_19375	PRSS12	NM_003619.2	NM_003619.2		8492	21327713	NM_003619.2	PRSS12	NP_003610.1	ILMN_1672720	0002480692	S	2578	CCTCCTGGGGGTATGGCTGTGGAGTCAAGGATTCTCCTGGTGTTTATACC	4	-	119422586-119422635	4q26e	Homo sapiens protease, serine, 12 (neurotrypsin, motopsin) (PRSS12), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Combining with acetylated low-density lipoproteins, advanced glycation end products, or other polyanionic ligands to initiate a change in cell activity [goid 5044] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MRT1; MOTOPSIN; MGC12722; BSSP-3; BSSP3	MRT1; BSSP-3; BSSP3; MOTOPSIN; MGC12722
Homo sapiens	Unigene	Hs.581293	ILMN_133474	HS.581293	Hs.581293		Hs.581293		13734823	BG213136			ILMN_1881844	0002360398	S	411	CATGGTAAAGGCAGCACAGTTTTGGGGGAATGACGGAGCCCCTGTTGGCA					RST32741 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_003609.2	ILMN_5112	HIRIP3	NM_003609.2	NM_003609.2		8479	21396499	NM_003609.2	HIRIP3	NP_003600.2	ILMN_1678037	0001770717	S	2236	GCAGCTCCCAAGGACACAAGCTGTTGGGATGCTACTTCTCAGCTTCACGC	16	-	30004374-30004423	16p11.2d	Homo sapiens HIRA interacting protein 3 (HIRIP3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9710638] [evidence TAS]	The formation or destruction of chromatin structures [goid 6333] [pmid 9710638] [evidence TAS]			
Homo sapiens	RefSeq	NM_152857.1	ILMN_18153	WTAP	NM_152857.1	NM_152857.1		9589	23199973	NM_152857.1	WTAP	NP_690596.1	ILMN_2260725	0001850100	I	57	CAAGCAGCGCGGCCTCGGCCTATGCGACCGGTGGCGCCGGCGCGGCTTCT	6	+	160068666-160068715	6q25.3f	Homo sapiens Wilms tumor 1 associated protein (WTAP), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10942595] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 10942595] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		KIAA0105; DKFZp686F20131; MGC3925	KIAA0105; DKFZp686F20131; MGC3925
Homo sapiens	RefSeq	XM_931089.1	ILMN_18153	WTAP	NM_152857.1	NM_152857.1		9589	23199973	NM_152857.1	WTAP	NP_690596.1	ILMN_1657618	0006840440	S	25	GCGCGGTGGCCCGGGGGGCCCGGGCGGCAGGGCAAGCAGCGCGGCCTCGG	6	+	160068634-160068683	6q25.3f	Homo sapiens Wilms tumor 1 associated protein (WTAP), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10942595] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 10942595] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]		KIAA0105; DKFZp686F20131; MGC3925	
Homo sapiens	RefSeq	XM_001715253.1	ILMN_337572	LOC100132653	XM_001715253.1	XM_001715253.1		100132653	169170111	XM_001715253.1	LOC100132653	XP_001715305.1	ILMN_3237895	0005490328	S	345	CATCAGTGAAGCCACCCAGAGTTCCCTTGCTGAGGATCTGAGCATGACCC	7	+	62797379-62797387:62799074-62799114	7q11.21b	PREDICTED: Homo sapiens similar to phosphorylase kinase gamma subunit 1 (LOC100132653), mRNA.					
Homo sapiens	RefSeq	NM_130467.3	ILMN_18374	PAGE5	NM_130467.3	NM_130467.3		90737	61743934	NM_130467.3	PAGE5	NP_569734.2	ILMN_2363141	0002650075	A	576	GGGACTCTGCCCACTTTTGATCCCACTAAAGTGCTGGAAGCAGGTGAAGG	X	+	55249137-55249179:55250420-55250426	Xp11.21a	Homo sapiens P antigen family, member 5 (prostate associated) (PAGE5), transcript variant 1, mRNA.				GAGEE1; PAGE-5	GAGEE1; PAGE-5
Homo sapiens	RefSeq	NM_130467.3	ILMN_18374	PAGE5	NM_130467.3	NM_130467.3		90737	61743934	NM_130467.3	PAGE5	NP_569734.2	ILMN_1695992	0002850594	I	189	TGGCTTTGAGGGAAAAGGGCCTCGCGGTGGTCCTCCGCCTTCCCCCAGGT	X	+	55246979-55247028	Xp11.21a	Homo sapiens P antigen family, member 5 (prostate associated) (PAGE5), transcript variant 1, mRNA.				GAGEE1; PAGE-5	GAGEE1; PAGE-5
Homo sapiens	RefSeq	NM_130467.3	ILMN_18374	PAGE5	NM_130467.3	NM_130467.3		90737	61743934	NM_130467.3	PAGE5	NP_569734.2	ILMN_1744656	0005900608	A	3	GAGCTCTGCAAGGAGAGGTTGTGTCTTCGTTCTTTCCGCCATCTTCGTTC	X	+	55246793-55246842	Xp11.21a	Homo sapiens P antigen family, member 5 (prostate associated) (PAGE5), transcript variant 1, mRNA.				GAGEE1; PAGE-5	GAGEE1; PAGE-5
Homo sapiens	RefSeq	XM_929109.1	ILMN_30730	LOC646146	XM_929109.1	XM_929109.1		646146	89038435	XM_929109.1	LOC646146	XP_934202.1	ILMN_1815571	0005870520	S	704	AATGCCTGAACTGGGAGCAGGAGAGGCTGCTGGAGCTGGGGCGGAATCAT	15	-	60332352-60332358:60333732-60333774		PREDICTED: Homo sapiens similar to Golgi autoantigen, golgin subfamily a, 2 (LOC646146), mRNA.					
Homo sapiens	RefSeq	NM_000038.3	ILMN_18629	APC	NM_000038.3	NM_000038.3		324	53759121	NM_000038.3	APC	NP_000029.2	ILMN_1662668	0005720722	S	10349	CTTTTTAAGCATGGTGGGGCACTCAGATAGGAGTGAATACACCTACCTGG	5	+	112209482-112209531	5q22.2a	Homo sapiens adenomatous polyposis coli (APC), mRNA.	A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 11283619] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12955080] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11035805] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11035805] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12955080] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 11283619] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 16753179] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12820959] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15327769] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12000790] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11955436] [evidence EXP]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 12072559] [evidence IDA]; A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome [goid 30877] [pmid 16188939] [evidence IDA]; A cytoplasmic protein complex containing glycogen synthase kinase-3-beta (GSK-3-beta), the adenomatous polyposis coli protein (APC), and the scaffolding protein axin, among others; phosphorylates beta-catenin, targets it for degradation by the proteasome [goid 30877] [pmid 9601641] [evidence IDA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 16188939] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 14728717] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of microtubule depolymerization; prevention of depolymerization of a microtubule can result from binding by 'capping' at the plus end (e.g. by interaction with another cellular protein of structure) or by exposing microtubules to a stabilizing drug such as taxol [goid 7026] [pmid 11166179] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8521819] [evidence IDA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 8259518] [evidence NAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8521819] [evidence IDA]; The establishment, maintenance and elaboration of a pattern along a line or a point [goid 9798] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of CDK activity [goid 45736] [pmid 8521819] [evidence IDA]; Any process that modulates the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore [goid 51988] [pmid 11283619] [evidence NAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [pmid 9601641] [evidence IC ]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes [goid 60070] [pmid 11035805] [evidence NAS]	Interacting selectively with the beta subunit of the catenin complex [goid 8013] [pmid 11533658] [evidence IPI]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [pmid 8259518] [evidence NAS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 16188939] [evidence IDA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 11166179] [evidence IDA]; Modulation of the activity of the enzyme protein kinase CK2 [goid 8605] [pmid 11972058] [evidence IDA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 11283619] [evidence IDA]	DP2.5; FAP; GS; DP3; DP2; FPC	DP2.5; FAP; GS; DP3; DP2; FPC
Homo sapiens	Unigene	Hs.484967	ILMN_96053	HS.484967	Hs.484967		Hs.484967		50471380	CR590573			ILMN_1904282	0003390050	S	971	TGTGTTCCAGGCCACCTGCTAACAATAAATAATGCTGCCCTGATGTGGGG	6	+	26795418-26795467		full-length cDNA clone CS0DI042YD07 of Placenta Cot 25-normalized of Homo sapiens (human)					
Homo sapiens	RefSeq	NM_001008563.1	ILMN_29423	USP20	NM_001008563.1	NM_001008563.1		10868	56682956	NM_001008563.1	USP20	NP_001008563.1	ILMN_1750325	0004670370	A	3998	ATCATCAGGATCAAAGCAGACGGGGCGTGGGTGGGGAAGGGGCTCTGGGA	9	+	131683555-131683604	9q34.11d	Homo sapiens ubiquitin specific peptidase 20 (USP20), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence NAS]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LSFR3A; VDU2; KIAA1003	LSFR3A; VDU2; KIAA1003
Homo sapiens	Unigene	Hs.563240	ILMN_116152	HS.563240	Hs.563240		Hs.563240		23538533	BU685012			ILMN_1903083	0004850288	S	216	TCCAAGAGCAAAGTGTTAGTGGTGTTGCTTCCATCTGAGGGCTGTGAGGG	4	-	11048971-11049020		UI-CF-EN1-acx-i-12-0-UI.s1 UI-CF-EN1 Homo sapiens cDNA clone UI-CF-EN1-acx-i-12-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_012219.2	ILMN_19997	MRAS	NM_012219.3	NM_012219.3		22808	145386561	NM_012219.3	MRAS	NP_036351.3	ILMN_1748881	0006940215	S	3665	GTGTAGAGTGTGCCCCGTGACATCCCTCCATCTTCTCCTCCATTATCATC	3	+	138123588-138123637	3q22.3c	Homo sapiens muscle RAS oncogene homolog (MRAS), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9395237] [evidence TAS]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 10446149] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10446149] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 9395237] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 9395237] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10446149] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [pmid 10934204] [evidence IPI]	RRAS3; M-RAs; FLJ42964; R-RAS3	RRAS3; M-RAs; FLJ42964; R-RAS3
Homo sapiens	RefSeq	NM_001039614.1	ILMN_36790	C15ORF59	NM_001039614.1	NM_001039614.1		388135	88853866	NM_001039614.1	C15orf59	NP_001034703.1	ILMN_2141118	0006660445	S	1110	CCCTGAACAGACTCGAAGGGTCACGAGGAACAGCAGCACCCAGACAGTGT	15	-	74032325-74032374	15q24.1b	Homo sapiens chromosome 15 open reading frame 59 (C15orf59), mRNA.				MGC131524	MGC131524
Homo sapiens	RefSeq	NM_207647.1	ILMN_136950	FSD1CL	NM_207647.1	NM_207647.1		405752	46518525	NM_207647.1	FSD1CL	NP_997530.1	ILMN_1677572	0003850274	S	3130	CTCTTGGTCCATGCCCCATGCAGTGTCAACTGATGTTTAAGCTACAGAGC	9	+	107350604-107350653		Homo sapiens FSD1 C-terminal like (FSD1CL), mRNA.				FSD1L; MGC45564	FSD1L; MGC45564
Homo sapiens	RefSeq	NM_018652.2	ILMN_137287	GOLGA6	NM_018652.2	NM_018652.2		55889	30260193	NM_018652.2	GOLGA6	NP_061122.2	ILMN_1737359	0001500692	S	1963	CCAGGAACTTGGGGCTGCCGGTGAGCAGGATGGTGTTTATGAAGTGAGCC	15	+	70745491-70745522:70745609-70745626	15q24.1a	Homo sapiens golgi autoantigen, golgin subfamily a, 6 (GOLGA6), mRNA.				GLP	GLP
Homo sapiens	RefSeq	XM_373780.3	ILMN_34546	LOC388481	XM_373780.3	XM_373780.3		388481	89047246	XM_373780.3	LOC388481	XP_373780.2	ILMN_1709221	0005490082	A	456	AAGCGTGGCAGTTTCCCCTGAGCTCTCCTTCCTGCTGGTATGTAAGGCGT	18	+	68698332-68698381		PREDICTED: Homo sapiens hypothetical LOC388481 (LOC388481), mRNA.					
Homo sapiens	RefSeq	XM_499024.2	ILMN_30776	LOC441126	XM_499024.2	XM_499024.2		441126	88990477	XM_499024.2	LOC441126	XP_499024.1	ILMN_1697123	0000610541	S	189	TACCCATGGGGACCTCAACAGCTTTGCCATTGCACACTATCTTTGCAGAC	6	+	4987741-4987790		PREDICTED: Homo sapiens hypothetical LOC441126 (LOC441126), mRNA.					
Homo sapiens	RefSeq	NM_002588.2	ILMN_16486	PCDHGC3	NM_002588.2	NM_002588.2		5098	14277674	NM_002588.2	PCDHGC3	NP_002579.2	ILMN_2345824	0004810767	A	89	CGCTGAGAGGAACTGCTTTTGAGTGAGATGGTCCCAGAGGCCTGGAGGAG	5	+	140835841-140835867:140835868-140835890	5q31.3c	Homo sapiens protocadherin gamma subfamily C, 3 (PCDHGC3), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [pmid 8508762] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH-GAMMA-C3; PC43; PCDH2	PCDH-GAMMA-C3; PC43; PCDH2
Homo sapiens	RefSeq	XM_377445.3	ILMN_42631	LOC401860	XM_377445.3	XM_377445.3		401860	89040520	XM_377445.3	LOC401860	XP_377445.3	ILMN_1784900	0007380687	A	970	TTGCAAAGGTGGGACGAGATCTGCCAGGCTCTGCTTGCTGAATGGGACCC	16	-	74285346-74285395		PREDICTED: Homo sapiens similar to double homeobox 4c (LOC401860), mRNA.					
Homo sapiens	RefSeq	XM_001714457.1	ILMN_346319	LOC100130128	XM_001714457.1	XM_001714457.1		100130128	169168201	XM_001714457.1	LOC100130128	XP_001714509.1	ILMN_3266014	0004220671	M	1287	GCTCGAGTCCATTTGCAGTCTTCACGTAGGAAACGGTGCTAGGGCCCATG				5q13.3b	PREDICTED: Homo sapiens hypothetical LOC100130128 (LOC100130128), mRNA.					
Homo sapiens	RefSeq	NM_006247.2	ILMN_24726	PPP5C	NM_006247.2	NM_006247.2		5536	20127496	NM_006247.2	PPP5C	NP_006238.1	ILMN_1745332	0006770593	S	1690	TTATTCCCCTTTAGGTTTGCAGAGGGGGTAGGGGCAGAGTCAGGGGCTGG	19	+	46893733-46893782	19q13.32b	Homo sapiens protein phosphatase 5, catalytic subunit (PPP5C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7925273] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 7925273] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 7925273] [evidence TAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 7925273] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 7925273] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14764652] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ36922; PP5; PPP5	FLJ36922; PP5; PPP5
Homo sapiens	RefSeq	XM_939524.1	ILMN_35164	LOC390427	XM_939524.1	XM_939524.1		390427	89037195	XM_939524.1	LOC390427	XP_944617.1	ILMN_1723855	0004610025	S	85	CCACGTTTCTGTGACTTGAGTGCCCTGGGAGTTTTACGCTGCCTCGTCTC				13q34d	PREDICTED: Homo sapiens similar to TBP-associated factor 15 isoform 1 (LOC390427), mRNA.					
Homo sapiens	RefSeq	NM_020177.2	ILMN_164027	FEM1C	NM_020177.2	NM_020177.2		56929	36030993	NM_020177.2	FEM1C	NP_064562.1	ILMN_1703330	0002000228	S	5646	GCCCTTATGTGTCACTAAACAACTAGTTTCTCTCCCTTTTGTCAGTTCCC	5	-	114884624-114884673	5q22.3b	Homo sapiens fem-1 homolog c (C. elegans) (FEM1C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		KIAA1785; FEM1A; EUROIMAGE686608; EUROIMAGE783647	KIAA1785; FEM1A; EUROIMAGE686608; EUROIMAGE783647
Homo sapiens	RefSeq	XM_936264.1	ILMN_166042	FLJ21767	XM_379820.3	XM_379820.3		401331	113419507	XM_379820.3	FLJ21767	XP_379820.2	ILMN_1655196	0000670400	A	209	AGGAGAAGTACGTGGAGCTGGACCCCAGCAAAGTGGAAGTTAAGGATGTA				7p13d	PREDICTED: Homo sapiens hypothetical protein FLJ21767, transcript variant 2 (FLJ21767), mRNA.					
Homo sapiens	RefSeq	NM_006989.3	ILMN_166042	FLJ21767	XM_379820.3	XM_379820.3		401331	113419507	XM_379820.3	FLJ21767	XP_379820.2	ILMN_1672800	0002030706	A	149	AGGTGGCCGGGATGCAGTACCTGCACGGCGTCCTGGGCCCCATCATCAAC				7p13d	PREDICTED: Homo sapiens hypothetical protein FLJ21767, transcript variant 2 (FLJ21767), mRNA.					CAPRI; GAPL; KIAA0538
Homo sapiens	RefSeq	NM_012306.2	ILMN_16270	FAIM2	NM_012306.2	NM_012306.2		23017	34101289	NM_012306.2	FAIM2	NP_036438.2	ILMN_1803855	0005270504	S	4571	CCGACACTCCTGCTGTCCACTGGCCTTAGCTCCTGCAAGTTCCCCAGTGT	12	-	50260762-50260811	12q13.13a	Homo sapiens Fas apoptotic inhibitory molecule 2 (FAIM2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10535980] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16964429] [evidence NAS]	KIAA0950; LFG; NMP35; TMBIM2; NGP35	KIAA0950; LFG; NMP35; TMBIM2; NGP35
Homo sapiens	RefSeq	XM_001716169.1	ILMN_347823	LOC100132932	XM_001716169.1	XM_001716169.1		100132932	169217433	XM_001716169.1	LOC100132932	XP_001716221.1	ILMN_3245865	0002320497	S	174	TGGATTTGCAGGTCAGGCTGGGGAGCCTGGGTGGAGGAACTCAGCCATCC	Y	-	6191964-6191984:6192162-6192190	Yp11.2i	PREDICTED: Homo sapiens similar to CYorf16 protein (LOC100132932), mRNA.					
Homo sapiens	RefSeq	NM_007209.2	ILMN_164055	LOC646766	XR_017605.1	XR_017605.1		646766	113417477	XR_017605.1	LOC646766		ILMN_1775243	0002340326	S	622	AGAAGGAGGAGCTGCTGAAACAGCTGGACGACCTGAAGGTGGAGCTGTCC	6	-	34339344-34339393	6p21.31e	PREDICTED: Homo sapiens similar to 60S ribosomal protein L35 (LOC646766), mRNA.					
Homo sapiens	RefSeq	NM_017801.2	ILMN_789	CMTM6	NM_017801.2	NM_017801.2		54918	32130534	NM_017801.2	CMTM6	NP_060271.1	ILMN_1696494	0001470520	S	2686	GGCTACCTCAGGGTCACCACCCATGTATTGGGCTTAGTCAGGATTGACAG	3	-	32523434-32523483	3p22.3c	Homo sapiens CKLF-like MARVEL transmembrane domain containing 6 (CMTM6), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	FLJ20396; CKLFSF6; PRO2219	FLJ20396; CKLFSF6; PRO2219
Homo sapiens	RefSeq	NM_170725.2	ILMN_18386	PGBD2	NM_001017434.1	NM_001017434.1		267002	62953122	NM_001017434.1	PGBD2	NP_001017434.1	ILMN_1735075	0000780373	A	1704	CTTTTGAGGGATAATCTGCCTTGTATTTAGTCAGAGGGCTAGAGGTGCAG	1	+	247179640-247179689	1q44f	Homo sapiens piggyBac transposable element derived 2 (PGBD2), transcript variant 2, mRNA.					
Homo sapiens	RefSeq	XM_928869.1	ILMN_45004	LOC645897	XM_928869.1	XM_928869.1		645897	89025337	XM_928869.1	LOC645897	XP_933962.1	ILMN_1746842	0004920091	S	258	CGCTATGGCAACCTGGCTGGGTGTGCACAAGCTCAGGGCAGTGCTTACAT	7	+	92506828-92506877		PREDICTED: Homo sapiens hypothetical protein LOC645897 (LOC645897), mRNA.					
Homo sapiens	RefSeq	NM_004001.3	ILMN_27581	FCGR2B	NM_004001.3	NM_004001.3		2213	50511929	NM_004001.3	FCGR2B	NP_003992.3	ILMN_1660027	0006650341	A	1069	GGAAGATCTGGTATTTCCTGGCCTAAATTCCCCTTGGGGAGGACAGGGAG	1	+	159914011-159914060	1q23.3b	Homo sapiens Fc fragment of IgG, low affinity IIb, receptor (CD32) (FCGR2B), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11955599] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2139735] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2142460] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2142460] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11567028] [evidence IPI]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	CD32B; IGFR2; CD32; FCG2; FCGR2	CD32B; IGFR2; CD32; FCG2; FCGR2
Homo sapiens	RefSeq	NM_004001.3	ILMN_27581	FCGR2B	NM_004001.3	NM_004001.3		2213	50511929	NM_004001.3	FCGR2B	NP_003992.3	ILMN_2382403	0007550215	A	1538	ACCTTTTCAAGGCTGTATTGGTTGGAGTGTAGACTGAACTGCCTGGGGTC	1	+	159914480-159914529	1q23.3b	Homo sapiens Fc fragment of IgG, low affinity IIb, receptor (CD32) (FCGR2B), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11955599] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2139735] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2142460] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2142460] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11567028] [evidence IPI]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]	CD32B; IGFR2; CD32; FCG2; FCGR2	CD32B; IGFR2; CD32; FCG2; FCGR2
Homo sapiens	Unigene	Hs.569831	ILMN_122012	HS.569831	Hs.569831		Hs.569831		18508631	BM459591			ILMN_1873075	0003840228	S	452	TAAGCCCACCTCCCCTACCTGGAGCCGGAACACAGCATCATCCCAGTAAG					AGENCOURT_6417753 NIH_MGC_71 Homo sapiens cDNA clone IMAGE:5534210 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002755.2	ILMN_164648	MAP2K1	NM_002755.2	NM_002755.2		5604	14589898	NM_002755.2	MAP2K1	NP_002746.1	ILMN_1694240	0001050600	S	1801	GTTGACATCCAAATCTAGCCAGAGCCCTTCACTGCCATGATAGCTGGGGC	15	+	64570565-64570614	15q22.31c	Homo sapiens mitogen-activated protein kinase kinase 1 (MAP2K1), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 10912793] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10570282] [evidence TAS]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; The process whereby a relatively unspecialized cell acquires specialized features of a neuron [goid 30182] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a keratinocyte [goid 30216] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 8388392] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15299019] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKMK1; MKK1; MAPKK1; MEK1	PRKMK1; MKK1; MAPKK1; MEK1
Homo sapiens	RefSeq	XM_930217.1	ILMN_30568	LOC127011	XM_930217.1	XM_930217.1		127011	88943651	XM_930217.1	LOC127011	XP_935310.1	ILMN_1677956	0002490347	A	3	GGCCTTCTCTGTGAAGGAAAACCTTTCTTGGCCAGGACTTGCAGTAGGTG	1	+	195458112-195458161	1q31.3c	PREDICTED: Homo sapiens similar to ATPase, H+ transporting, lysosomal accessory protein 2 (LOC127011), mRNA.					
Homo sapiens	RefSeq	NM_006028.3	ILMN_4398	HTR3B	NM_006028.3	NM_006028.3		9177	47519847	NM_006028.3	HTR3B	NP_006019.1	ILMN_1762210	0004290563	S	1357	TCTGTGCTCCCTCTGGGCACTGTGGGGCGGCGTGTGAAGACTGAAGTGTT	11	+	113322033-113322069:113322070-113322082	11q23.2a	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 3B (HTR3B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9950429] [evidence TAS]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The series of molecular signals generated as a consequence of a serotonin receptor binding to one of its physiological ligands [goid 7210] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9950429] [evidence TAS]	Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 9950429] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [pmid 9950429] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA];  [goid 5232] [evidence IEA];  [goid 5232] [pmid 9950429] [evidence TAS]; Combining with a neurotransmitter to initiate a change in cell activity [goid 30594] [evidence IEA]	5-HT3B	5-HT3B
Homo sapiens	RefSeq	NM_018046.3	ILMN_18179	AGGF1	NM_018046.3	NM_018046.3		55109	46397362	NM_018046.3	AGGF1	NP_060516.2	ILMN_1776153	0005130102	S	3920	CGTATGTACAGTTAGACTTGCAGGCTGCAGGAGTGCCCTGCATTGTTTTC	5	+	76360492-76360541	5q13.3d	Homo sapiens angiogenic factor with G patch and FHA domains 1 (AGGF1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14961121] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14961121] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 14961121] [evidence IDA]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [pmid 15905966] [evidence TAS]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 14961121] [evidence IDA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 15486042] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 14961121] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases angiogenesis [goid 45766] [pmid 14961121] [evidence IDA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14961121] [evidence IPI]; Interacting selectively with any component on the surface of a eukaryotic cell [goid 43499] [pmid 14961121] [evidence IDA]	HUS84971; VG5Q; GPATCH7; HSU84971; GPATC7; FLJ10283	VG5Q; FLJ10283; HUS84971; GPATCH7; HSU84971; GPATC7
Homo sapiens	RefSeq	NR_001546.1	ILMN_9199	TTTY20	NR_001546.1	NR_001546.1		252951	32563548	NR_001546.1	TTTY20		ILMN_1768489	0007100196	S	60	GGAGCACTGTGTTGGCATCCTCGAGCTCCAGCTGTTCTGTAGAGAAACTG	Y	-	9227638-9227665:9232360-9232381	Yp11.2d	Homo sapiens testis-specific transcript, Y-linked 20 (non-protein coding) (TTTY20), non-coding RNA.					
Homo sapiens	RefSeq	NM_007013.3	ILMN_164871	WWP1	NM_007013.3	NM_007013.3		11059	33946331	NM_007013.3	WWP1	NP_008944.1	ILMN_2215370	0002000615	S	3957	GGTTTTTATGAAGCCAGATGGATTGAAGAGTTACATAAGCATTTGAATGC	8	+	87479416-87479465	8q21.3a	Homo sapiens WW domain containing E3 ubiquitin protein ligase 1 (WWP1), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 9169421] [evidence NAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9169421] [evidence NAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9647693] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 12535537] [evidence TAS]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which a virion enters a host cell, including virion attachment and penetration [goid 46718] [pmid 12450395] [evidence TAS]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9169421] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9647693] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate [goid 16881] [evidence IEA]	hSDRP1; Tiul1; AIP5; DKFZp434D2111	hSDRP1; Tiul1; AIP5; DKFZp434D2111
Homo sapiens	Unigene	Hs.162932	ILMN_79879	HS.162932	Hs.162932		Hs.162932		81140489	DA572426			ILMN_1823533	0006900768	S	447	CTCCTGACCCAGGCTGCCGACCCCTAACCCTGTTTTCTCTCCACAGGACA	4	-	140576879-140576928		DA572426 HEMBB1 Homo sapiens cDNA clone HEMBB1001157 5, mRNA sequence					
Homo sapiens	RefSeq	NM_019084.2	ILMN_3931	CCNJ	NM_019084.2	NM_019084.2		54619	40254888	NM_019084.2	CCNJ	NP_061957.2	ILMN_2206812	0006110433	S	3484	AAGATATTGGGATAGAGATCCCAACTTGAAACAACAGCCAGTGCCTGTGG	10	+	97809986-97810035	10q23.33d	Homo sapiens cyclin J (CCNJ), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			bA690P14.1	bA690P14.1
Homo sapiens	RefSeq	XM_938067.1	ILMN_178232	LOC648987	XR_018477.1	XR_018477.1		648987	113417044	XR_018477.1	LOC648987		ILMN_1778456	0005960301	S	2327	CTAATTACAGTGTGGTTGGAGGCGGGGTGGATTCCAGGGAGGTCAGGAAG				5p12c	PREDICTED: Homo sapiens misc_RNA (LOC648987), miscRNA.					
Homo sapiens	Unigene	Hs.537782	ILMN_103503	HS.537782	Hs.537782		Hs.537782		24529369	CA311271			ILMN_1906785	0001300594	S	366	CCAACTCTTCACCCATTCACCTAGGACTGAGTAGTTTCCCAGGATGCAGG	1	-	176901829-176901878		UI-CF-FN0-aff-a-18-0-UI.s1 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-aff-a-18-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001080.3	ILMN_1025	ALDH5A1	NM_001080.3	NM_001080.3		7915	25777719	NM_001080.3	ALDH5A1	NP_001071.1	ILMN_2372398	0007040327	A	4536	TGGCATAGCTACCGTGAGTTCTCAGCAGGAACTTCCCAGCGATGATAATG	6	+	24536840-24536889	6p22.2b	Homo sapiens aldehyde dehydrogenase 5 family, member A1 (ALDH5A1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 16199352] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	The chemical reactions and pathways involving glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue [goid 6650] [evidence IEA]; The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative [goid 6678] [evidence IEA]; The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6681] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]; The chemical reactions and pathways involving fatty acids with a chain length of less than 8 carbons [goid 46459] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence ISS]; The chemical reactions and pathways involving acetate, the anion of acetic acid [goid 6083] [evidence ISS]; The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle [goid 6105] [evidence ISS]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence ISS]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence ISS]; The chemical reactions and pathways involving glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue [goid 6650] [evidence ISS]; The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6681] [evidence ISS]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence ISS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9683595] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9450] [pmid 9683595] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9450] [pmid 15037717] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence ISS]; The chemical reactions and pathways involving fatty acids with a chain length of less than 8 carbons [goid 46459] [evidence ISS]; The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits [goid 51289] [pmid 16199352] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [pmid 7814412] [evidence ISS]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [pmid 9683595] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16199352] [evidence IC ]	SSDH; SSADH	SSDH; SSADH
Homo sapiens	RefSeq	NM_001080.3	ILMN_1025	ALDH5A1	NM_001080.3	NM_001080.3		7915	25777719	NM_001080.3	ALDH5A1	NP_001071.1	ILMN_2372403	0002640274	A	5056	GTGTGTTTTAGTGTCTAGTCTGCAGAGAGCTGTGTGATTAATAAACGTGG	6	+	24537360-24537409	6p22.2b	Homo sapiens aldehyde dehydrogenase 5 family, member A1 (ALDH5A1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 16199352] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]	The chemical reactions and pathways involving glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue [goid 6650] [evidence IEA]; The chemical reactions and pathways involving glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group. They are neutral glycolipids containing equimolar amounts of fatty acid, glucose, and sphingosine or a sphingosine derivative [goid 6678] [evidence IEA]; The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6681] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence IEA]; The chemical reactions and pathways involving fatty acids with a chain length of less than 8 carbons [goid 46459] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence ISS]; The chemical reactions and pathways involving acetate, the anion of acetic acid [goid 6083] [evidence ISS]; The chemical reactions and pathways involving succinate, also known as butanedioate or ethane dicarboxylate, the dianion of succinic acid. Succinate is an important intermediate in metabolism and a component of the TCA cycle [goid 6105] [evidence ISS]; The chemical reactions and pathways involving glutamate, the anion of 2-aminopentanedioic acid [goid 6536] [evidence ISS]; The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid [goid 6541] [evidence ISS]; The chemical reactions and pathways involving glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue [goid 6650] [evidence ISS]; The chemical reactions and pathways involving galactosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of galactose by a ceramide group [goid 6681] [evidence ISS]; The chemical reactions and pathways involving glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins; it has a specific role in the reduction of hydrogen peroxide (H2O2) and oxidized ascorbate, and it participates in the gamma-glutamyl cycle [goid 6749] [evidence ISS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 9683595] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9450] [pmid 9683595] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9450] [pmid 15037717] [evidence IMP]; A process whereby a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22904] [evidence ISS]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [evidence ISS]; The chemical reactions and pathways involving fatty acids with a chain length of less than 8 carbons [goid 46459] [evidence ISS]; The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits [goid 51289] [pmid 16199352] [evidence IDA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [pmid 7814412] [evidence ISS]; Catalysis of the reaction: succinate semialdehyde + NAD+ + H2O = succinate + NADH + H+ [goid 4777] [pmid 9683595] [evidence IDA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 16199352] [evidence IC ]	SSDH; SSADH	SSDH; SSADH
Homo sapiens	RefSeq	NM_003023.2	ILMN_1151	SH3BP2	NM_003023.3	NM_003023.3		6452	142344070	NM_003023.3	SH3BP2	NP_003014.2	ILMN_1801914	0007160184	S	6822	CCGGTATGGTCCATGGAAGCCAAAAGATTGGACATGCCTGCTGTAGATGG	4	+	2810234-2810283	4p16.3a	Homo sapiens SH3-domain binding protein 2 (SH3BP2), mRNA.		The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9299232] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 9299232] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	CRPM; CRBM; RES4-23; 3BP2; FLJ42079	CRPM; CRBM; RES4-23
Homo sapiens	RefSeq	NM_152450.1	ILMN_16018	FAM81A	NM_152450.2	NM_152450.2		145773	148613879	NM_152450.2	FAM81A	NP_689663.2	ILMN_1699623	0007000494	S	2551	CTGACAGTGAGACACAACGTTCTGAACTGTGAGGGTGTCCCAGGAAAAAG	15	+	57602126-57602175	15q22.2a	Homo sapiens family with sequence similarity 81, member A (FAM81A), mRNA.				MGC26690	MGC26690
Homo sapiens	RefSeq	NM_024328.2	ILMN_17032	THTPA	NM_024328.2	NM_024328.2		79178	54607163	NM_024328.2	THTPA	NP_077304.1	ILMN_1737168	0005900593	S	1780	GCGGCTCCTAAACCGCCTTACAGCTGAGTTAGAAGATGAGGAGAGGCAGC	14	+	23098240-23098289	14q11.2g	Homo sapiens thiamine triphosphatase (THTPA), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 11827967] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 11827967] [evidence NAS]; The chemical reactions and pathways resulting in the formation of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) [goid 6171] [evidence IEA]; The chemical reactions and pathways involving thiamin (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver [goid 6772] [pmid 11827967] [evidence TAS]; The process of removing one or more phosphoric (ester or anhydride) residues from a molecule [goid 16311] [pmid 11827967] [evidence IDA]	Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate [goid 4016] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [pmid 11827967] [evidence TAS]; Catalysis of the reaction: thiamin triphosphate + H2O = thiamin diphosphate + phosphate [goid 50333] [pmid 11827967] [evidence IDA]	MGC2652; THTPASE; THTP	MGC2652; THTPASE; THTP
Homo sapiens	RefSeq	XM_934113.1	ILMN_42664	LOC653489	XM_934113.1	XM_934113.1		653489	88953414	XM_934113.1	LOC653489	XP_939206.1	ILMN_1711073	0005870048	I	5975	TCTGTCACACCACTGTACTCCAGCCTGACGGCAGAGCGAGACTCCATCTC				2q12.2b	PREDICTED: Homo sapiens similar to Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270), transcript variant 7 (LOC653489), mRNA.					
Homo sapiens	Unigene	Hs.574023	ILMN_126204	HS.574023	Hs.574023		Hs.574023		10373073	BE858156			ILMN_1865188	0000160072	S	11	ATTTATTAGCAAATCTTGATTTTGACTCTGAAACGAACCCCCGGTTCATC					7g17e07.x1 NCI_CGAP_Brn23 Homo sapiens cDNA clone IMAGE:3306756 3 similar to contains MER12.t1 MER12 repetitive element ;, mRNA sequence					
Homo sapiens	Unigene	Hs.511718	ILMN_98047	HS.511718	Hs.511718		Hs.511718		28612892	BX282075			ILMN_1887011	0003990435	S	262	CCAGGAGGCCGAACACTTCTTTCTGCTTTCTTGACATCCGCTCACCAGGC	7	+	141981986-141982035		BX282075 NIH_MGC_120 Homo sapiens cDNA clone IMAGp998M2011561 ; IMAGE:5223355, mRNA sequence					
Homo sapiens	RefSeq	NM_001018000.2	ILMN_3555	KIAA1026	NM_001018000.2	NM_001018000.2		23254	66864888	NM_001018000.2	KIAA1026	NP_001018000.1	ILMN_1798458	0004640184	I	1646	CACGAGTGTGAACCTCTCTCCCCTGCGTCGCCACCTCTGTAATTGATGTA	1	+	15265043-15265092	1p36.21b-p36.21a	Homo sapiens kazrin (KIAA1026), transcript variant B, mRNA.				RP1-21O18.1	RP1-21O18.1
Homo sapiens	RefSeq	NM_015209.1	ILMN_3555	KIAA1026	NM_001018000.2	NM_001018000.2		23254	66864888	NM_001018000.2	KIAA1026	NP_001018000.1	ILMN_1770927	0001990427	A	1214	ACACCGAGCGACATCAACTCCCCTCGACACCGGACACACTCCCTCTGCAA	1	+	15259335-15259384	1p36.21b-p36.21a	Homo sapiens kazrin (KIAA1026), transcript variant B, mRNA.				RP1-21O18.1	RP1-21O18.1
Homo sapiens	RefSeq	XM_001732819.1	ILMN_339453	LOC642346	XM_001732819.1	XM_001732819.1		642346	169217329	XM_001732819.1	LOC642346	XP_001732871.1	ILMN_3281128	0002940605	M	2801	AAGAGTGAAATATGTTTTTATACCTCTCAGTTTCAGTTAGAGGCATATTT					PREDICTED: Homo sapiens hypothetical LOC642346 (LOC642346), mRNA.					
Homo sapiens	RefSeq	XM_001732819.1	ILMN_339453	LOC642346	XM_001732819.1	XM_001732819.1		642346	169217329	XM_001732819.1	LOC642346	XP_001732871.1	ILMN_3204619	0005420392	A	2209	TTTTCTAGCTGAGAGCATTTATATCTACAAACATTTTAAAGTCAGAGTTC					PREDICTED: Homo sapiens hypothetical LOC642346 (LOC642346), mRNA.					
Homo sapiens	RefSeq	XM_932007.1	ILMN_44250	LOC653421	XM_932007.1	XM_932007.1		653421	88942632	XM_932007.1	LOC653421	XP_937100.1	ILMN_1781601	0005900072	S	1	ATGGCATCTTATATCTGTGACCTGGTTCCTTTCATAGGAAACGGGGGGCG	1	+	40713553-40713589:40715381-40715393		PREDICTED: Homo sapiens similar to zinc finger protein 642 (LOC653421), mRNA.					
Homo sapiens	RefSeq	NM_003217.1	ILMN_21150	TMBIM6	NM_003217.2	NM_003217.2		7009	148746208	NM_003217.2	TMBIM6	NP_003208.2	ILMN_1693311	0000650519	S	2399	TGACATGCCACCCCGAATGGCTCACTTTCACTGAGGATGCTGTCCTCTGA	12	+	48444499-48444548	12q13.13a	Homo sapiens transmembrane BAX inhibitor motif containing 6 (TMBIM6), transcript variant 1, mRNA.				BI-1; TMBIM6	BI-1; TMBIM6
Homo sapiens	RefSeq	NM_153687.2	ILMN_10278	IKBIP	NM_153687.2	NM_153687.2		121457	58332446	NM_153687.2	IKBIP	NP_710154.1	ILMN_1701402	0003170605	I	2725	CTGGAGTTAGGAGGGCCTGTGGTAGACAGCGTGAATCATGAAAATAAGCC	12	-	99018177-99018226	12q23.1c	Homo sapiens IKBKB interacting protein (IKBIP), transcript variant 1, mRNA.				FLJ31051	FLJ31051
Homo sapiens	Unigene	Hs.581912	ILMN_134093	HS.581912	Hs.581912		Hs.581912		83129343	DB310706			ILMN_1859885	0006450019	S	177	TTCTCTGGGGGAAAAGGAAAAACAGCAAGGTGAGTATTCCCATGATCTTC	4	+	45587339-45587388		DB310706 BRSTN2 Homo sapiens cDNA clone BRSTN2012527 3, mRNA sequence					
Homo sapiens	RefSeq	XM_945231.1	ILMN_33279	LOC649214	XM_945231.1	XM_945231.1		649214	89059203	XM_945231.1	LOC649214	XP_950324.1	ILMN_1800033	0006060241	I	1152	GTGTTTTGTTGCAAGAAAAAGTTGCAGCTGTTTTGTTGACATTCTGAATG					PREDICTED: Homo sapiens similar to High mobility group protein 1-like 10 (HMG-1L10), transcript variant 4 (LOC649214), mRNA.					
Homo sapiens	RefSeq	XM_945231.1	ILMN_33279	LOC649214	XM_945231.1	XM_945231.1		649214	89059203	XM_945231.1	LOC649214	XP_950324.1	ILMN_1676938	0006520286	A	223	AGATGCTTCAGTCAACCTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGT					PREDICTED: Homo sapiens similar to High mobility group protein 1-like 10 (HMG-1L10), transcript variant 4 (LOC649214), mRNA.					
Homo sapiens	RefSeq	NM_018318.3	ILMN_29700	CCDC91	NM_018318.3	NM_018318.3		55297	70980530	NM_018318.3	CCDC91	NP_060788.3	ILMN_1676523	0002340594	S	1815	CGATATGATAGAGAATCATTCCGGCATTACCTAACCTCTTCTGCAGTTGG	12	+	28528279-28528328	12p11.22b	Homo sapiens coiled-coil domain containing 91 (CCDC91), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		DKFZP779L1558; HSD8; FLJ11088; p56; DKFZp779L1558	DKFZP779L1558; HSD8; FLJ11088; p56; DKFZp779L1558
Homo sapiens	RefSeq	XM_942862.1	ILMN_44497	LOC647488	XM_942862.1	XM_942862.1		647488	89041030	XM_942862.1	LOC647488	XP_947955.1	ILMN_1767595	0003800593	S	1065	GGGGGAGTGGGAGGATATGAAAACAGATGTAGGCAAGAGGGGAGTGGAAC					PREDICTED: Homo sapiens hypothetical protein LOC647488 (LOC647488), mRNA.					
Homo sapiens	RefSeq	XM_928966.1	ILMN_44965	LOC646004	XM_928966.1	XM_928966.1		646004	89044727	XM_928966.1	LOC646004	XP_934059.1	ILMN_1713811	0004780685	S	64	TGTGCTATGGCAGGCTCCCCGGGCTTGCAAGGACTCTGGACACTACAGGA	18	+	11634305-11634354	18p11.21f	PREDICTED: Homo sapiens similar to acyl-malonyl condensing enzyme (LOC646004), mRNA.					
Homo sapiens	RefSeq	NM_032174.4	ILMN_42128	TOMM40L	NM_032174.4	NM_032174.4		84134	90265810	NM_032174.4	TOMM40L	NP_115550.2	ILMN_2065606	0004260152	S	2359	GCTCTTGGAGGAACGAGCAAAACAGAAGCGGTGCATACCTCAGAGCCTGG	1	+	159466712-159466761	1q23.3a	Homo sapiens translocase of outer mitochondrial membrane 40 homolog (yeast)-like (TOMM40L), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11256614] [evidence IDA]	The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion [goid 8308] [evidence IEA]	RP11-297K8.10; TOMM40B; FLJ12770	RP11-297K8.10; TOMM40B; FLJ12770
Homo sapiens	RefSeq	NM_015694.1	ILMN_8883	KIAA1285	NM_015694.1	NM_015694.1		27153	23821012	NM_015694.1	KIAA1285	NP_056509.1	ILMN_1749583	0005860240	S	1553	GGCCACTCAGAGGGGCGGTGTAGGGCCCATCTAGTTGGGGATAGAACTTT	7	-	148759447-148759496	7q36.1b	Homo sapiens KIAA1285 protein (KIAA1285), mRNA.					
Homo sapiens	RefSeq	NR_029871.1	ILMN_388210	MIR379	NR_029871.1	NR_029871.1		494328	262206248	NR_029871.1	MIR379		ILMN_3309769	0001580131	S	16	GGAACGTAGGCGTTATGATTTCTGACCTATGTAACATGGTCCACTAACTC				14q32.31a	Homo sapiens microRNA 379 (MIR379), microRNA.					
Homo sapiens	RefSeq	XM_939863.1	ILMN_41638	LOC345537	XM_939863.1	XM_939863.1		345537	88989576	XM_939863.1	LOC345537	XP_944956.1	ILMN_1722969	0004280537	A	53	CTCTGTTGAGTTGGCAATGGCAGGAGCTGCAGGACCTTCAGCAAGAGCTG				5q32a	PREDICTED: Homo sapiens similar to TNF receptor-associated factor 4 isoform 1 (LOC345537), mRNA.					
Homo sapiens	RefSeq	NM_018403.2	ILMN_27256	DCP1A	NM_018403.4	NM_018403.4		55802	150418000	NM_018403.4	DCP1A	NP_060873.3	ILMN_1809285	0001450370	S	1649	GGAAAGCCAGCTCCCCTTCTCCTCTAACTATTGGAACGCCAGAAAGTCAG	3	-	53326340-53326389	3p21.1c-p21.1b	Homo sapiens DCP1 decapping enzyme homolog A (S. cerevisiae) (DCP1A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins [goid 184] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16364915] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16364915] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12417715] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	Nbla00360; FLJ21691; SMIF; SMAD4IP1; HSA275986	Nbla00360; SMIF; SMAD4IP1; HSA275986
Homo sapiens	Unigene	Hs.566139	ILMN_118507	HS.566139	Hs.566139		Hs.566139		31448481	CD516763			ILMN_1827880	0006270240	S	823	CAGGGCTGAGGGTGGGGCGGGAATCACCTGGAAGGTCACAGAAGTTCAAA					AGENCOURT_14364557 NIH_MGC_181 Homo sapiens cDNA clone IMAGE:30397891 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001039619.1	ILMN_41384	PRMT5	NM_001039619.1	NM_001039619.1		10419	88900506	NM_001039619.1	PRMT5	NP_001034708.1	ILMN_2403889	0003850520	A	2154	GGTGCAGTACATCTATGGGCTGTGATTCCCCTTGCCCATCAGAGAGGAGC	14	-	23389999-23390048	14q11.2f	Homo sapiens protein arginine methyltransferase 5 (PRMT5), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 9843966] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 9843966] [evidence TAS]; The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]; The addition of a methyl group onto a nitrogen atom of an arginine residue in a protein [goid 35246] [pmid 15369763] [evidence IDA]	Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [pmid 15369763] [evidence IDA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone-arginine = S-adenosyl-L-homocysteine + histone-N-methyl-arginine [goid 8469] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SKB1; HRMT1L5; IBP72; SKB1Hs; JBP1	SKB1; HRMT1L5; IBP72; SKB1Hs; JBP1
Homo sapiens	RefSeq	NM_005719.2	ILMN_14306	ARPC3	NM_005719.2	NM_005719.2		10094	23397667	NM_005719.2	ARPC3	NP_005710.1	ILMN_1655561	0007380193	S	151	GCACTGTTGCCTATCAGAAGTCAATTCAAAGGACCTGCCCCCAGAGAGAC	12	-	110878192-110878193:110883257-110883304	12q24.11c	Homo sapiens actin related protein 2/3 complex, subunit 3, 21kDa (ARPC3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments [goid 5885] [pmid 9230079] [evidence TAS]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [pmid 9230079] [evidence TAS]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]; Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament [goid 30833] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9230079] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	p21-Arc; ARC21	p21-Arc; ARC21
Homo sapiens	Unigene	Hs.105636	ILMN_74929	HS.105636	Hs.105636		Hs.105636		46930487	BX417162			ILMN_1838310	0006350747	S	703	GCATACCTGTAACCCCCTAGAACCCAAGTGCCAGAATTCCTAGATGCTGC	1	-	155358943-155358992		BX417162 Homo sapiens PLACENTA Homo sapiens cDNA clone CS0DE005YO02 5-PRIME, mRNA sequence					
Homo sapiens	Unigene	Hs.527669	ILMN_100923	HS.527669	Hs.527669		Hs.527669		38149095	CF887234			ILMN_1902738	0006060753	S	231	TCAGGTGACGCTGGGTCTGGGGCACTCTGCATCTACAGCCTGGAACACAA	1	+	229080017-229080066		UI-CF-FN0-afk-c-11-18-UI.r18 UI-CF-FN0 Homo sapiens cDNA clone UI-CF-FN0-afk-c-11-18-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_030594.3	ILMN_19747	CPEB1	NM_030594.3	NM_030594.3		64506	119395724	NM_030594.3	CPEB1	NP_085097.3	ILMN_2288905	0002760347	I	133	CAGGAAGGATAAAAGATTGCTGGGACAACCAGGAAGCACCTGCTCTCTCC	15	-	83296058-83296107	15q25.2a	Homo sapiens cytoplasmic polyadenylation element binding protein 1 (CPEB1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	MGC34136; CEBP; CPE-BP1; MGC60106; CPEB; FLJ13203	CPEB; FLJ13203
Homo sapiens	RefSeq	NR_031575.1	ILMN_388504	MIR1185-1	NR_031575.1	NR_031575.1		100302157	269846954	NR_031575.1	MIR1185-1		ILMN_3309164	0000990370	S	14	AGAGGATACCCTTTGTATGTTCACTTGATTAATGGCGAATATACAGGGGG					Homo sapiens microRNA 1185-1 (MIR1185-1), microRNA.					
Homo sapiens	RefSeq	NR_000039.1	ILMN_3890	RAB9P1	NR_000039.1	NR_000039.1		9366	24371441	NR_000039.1	RAB9P1		ILMN_1779710	0000460176	S	375	CTGACAGTGAACAGCAGGTGTCTGCAGAAGAAGCCCAAGCCTGGTGCAGG	5	+	104463448-104463497	5q21.2b	Homo sapiens RAB9, member RAS oncogene family, pseudogene 1 (RAB9P1), non-coding RNA.					
Homo sapiens	RefSeq	NM_015110.1	ILMN_17022	SMC5	NM_015110.2	NM_015110.2		23137	142365901	NM_015110.2	SMC5	NP_055925.1	ILMN_1757132	0006980041	S	3160	CAATCAGGGAATGGACCCAATCAATGAACGGAGAGTGTTTGAAATGGTTG				9q21.11c	Homo sapiens structural maintenance of chromosomes 5 (SMC5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SMC5L1; KIAA0594; SMC5L!	SMC5L1; KIAA0594; SMC5L!
Homo sapiens	RefSeq	XM_930055.1	ILMN_45801	LOC644229	XM_930055.1	XM_930055.1		644229	89057904	XM_930055.1	LOC644229	XP_935148.1	ILMN_1689701	0002450551	S	121	TTGTTACCAGCCTTCACCTGCCTGGAGCCTTCTATGTGGTCACCTAACTG	20	+	56345286-56345335		PREDICTED: Homo sapiens hypothetical protein LOC644229 (LOC644229), mRNA.					
Homo sapiens	RefSeq	NR_024593.1	ILMN_370374	POM121L10P	NR_024593.1	NR_024593.1		646074	218083819	NR_024593.1	POM121L10P		ILMN_3251332	0001110471	S	9362	GCCCAGGCTGTAATCAAACTCTTGGGCTCCAGTGATTCTCCTGGCTCAGC	22	-	25041268-25041317	22q11.23b	Homo sapiens POM121 membrane glycoprotein-like 10 (rat) pseudogene (POM121L10P), non-coding RNA.					
Homo sapiens	RefSeq	XM_377426.1	ILMN_8072	LOC401845	XM_377426.1	XM_377426.1		401845	42660991	XM_377426.1	LOC401845	XP_377426.1	ILMN_1653579	0001400093	A	1	ATGGACACGTTTTGCTCCACACTCCTGCTGCTGACCACCCCTTCCTGGGT	16	+	32766535-32766580:32766667-32766670		PREDICTED: Homo sapiens similar to Ig heavy chain V-II region SESS precursor (LOC401845), mRNA.					
Homo sapiens	RefSeq	NM_173851.2	ILMN_10814	SLC30A8	NM_173851.2	NM_173851.2		169026	64762488	NM_173851.2	SLC30A8	NP_776250.2	ILMN_1774869	0005290014	S	5146	CACACATCCCAAGCTTTACAAATCCTGCCTGGCTTGACAGTGATGAGGCC	8	+	118188726-118188775	8q24.11a	Homo sapiens solute carrier family 30 (zinc transporter), member 8 (SLC30A8), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15331542] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [pmid 15331542] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells [goid 6812] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [pmid 16984975] [evidence IMP]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [pmid 16984975] [evidence IMP]; The process of binding or confining zinc ions such that they are separated from other components of a biological system [goid 32119] [pmid 15331542] [evidence IDA]	Catalysis of the transfer of zinc (Zn) ions from one side of a membrane to the other [goid 5385] [pmid 15331542] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of cation from one side of the membrane to the other [goid 8324] [evidence IEA]	ZNT8; ZnT-8	ZNT8; ZnT-8
Homo sapiens	RefSeq	NM_014867.1	ILMN_20625	KBTBD11	NM_014867.1	NM_014867.1		9920	7662259	NM_014867.1	KBTBD11	NP_055682.1	ILMN_1784630	0005050093	S	6539	GGTAAACTACACCTGTTGAAGGCCAAGTTCAGGGCAGCTGTTGTGATCTG	8	+	1942338-1942387	8p23.3a	Homo sapiens kelch repeat and BTB (POZ) domain containing 11 (KBTBD11), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0711; KLHDC7C	KIAA0711; KLHDC7C
Homo sapiens	RefSeq	NM_001025237.1	ILMN_22091	TSPAN4	NM_001025237.1	NM_001025237.1		7106	68800017	NM_001025237.1	TSPAN4	NP_001020408.1	ILMN_2290522	0000380343	I	75	GGCCTGTCCTCAGTCCCGACTGGGCTCTACCTGAGGACCCTGGGGAGCCT	11	+	834520-834569	11p15.5c	Homo sapiens tetraspanin 4 (TSPAN4), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9360996] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9360996] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 9360996] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	TM4SF7; NAG-2; NAG2; TETRASPAN; TSPAN-4	NAG-2; NAG2; TETRASPAN; TM4SF7; TSPAN-4
Homo sapiens	Unigene	Hs.574082	ILMN_126263	HS.574082	Hs.574082		Hs.574082		9098521	BE246772			ILMN_1866286	0007570452	S	96	GTTCTTGATCTTAACCCCTAGCCTGGGATGGTGCAGGCTGAACGGTGAGC	12	+	107553848-107553897		TCBAP1E4443 Pediatric pre-B cell acute lymphoblastic leukemia Baylor-HGSC project=TCBA Homo sapiens cDNA clone TCBAP4443, mRNA sequence					
Homo sapiens	RefSeq	XM_929353.1	ILMN_45139	LOC646426	XM_929353.1	XM_929353.1		646426	89030901	XM_929353.1	LOC646426	XP_934446.1	ILMN_1699806	0000150608	S	108	GCCCACAGGTGTCCTCAGACCCTATCAGGAGAAGAGCTTGTGGAAGATTA	10	-	38579374-38579423		PREDICTED: Homo sapiens similar to TFIIH basal transcription factor complex helicase XPB subunit (Basic transcription factor 2 89 kDa subunit) (BTF2-p89) (TFIIH 89 kDa subunit) (DNA-repair protein complementing XP-B cells) (Xeroderma pigmentosum group B complementing prot... (LOC646426), mRNA.					
Homo sapiens	RefSeq	XM_929339.1	ILMN_46032	LOC283767	XM_929339.2	XM_929339.2		283767	113425062	XM_929339.2	LOC283767	XP_934432.2	ILMN_1651980	0001050577	I	1543	GCACGAGCAGGAGAAGATACGGAAGCAGGAGGAGAAGGTGTGGAGGCAGG	15	+	20294431-20294480	15q11.2b	PREDICTED: Homo sapiens FLJ40198 protein (LOC283767), mRNA.					
Homo sapiens	RefSeq	XM_496041.2	ILMN_46032	LOC283767	XM_929339.2	XM_929339.2		283767	113425062	XM_929339.2	LOC283767	XP_934432.2	ILMN_1730369	0004210523	S	483	CCATACGAATCCTTACATGTCAGAAAACTGAGCTTCAGATGGCACTCTAC	15	+	20290911-20290960	15q11.2b	PREDICTED: Homo sapiens FLJ40198 protein (LOC283767), mRNA.					
Homo sapiens	RefSeq	XM_497437.2	ILMN_46032	LOC283767	XM_929339.2	XM_929339.2		283767	113425062	XM_929339.2	LOC283767	XP_934432.2	ILMN_1728933	0003170465	A	497	ACATGTCAGAAAACTGAGCTTCAGATGGCACTCTACTACAGCCAGCATGC	15	+	20290925-20290974	15q11.2b	PREDICTED: Homo sapiens FLJ40198 protein (LOC283767), mRNA.					
Homo sapiens	RefSeq	NM_018444.2	ILMN_163087	PPM2C	NM_018444.2	NM_018444.2		54704	45439338	NM_018444.2	PPM2C	NP_060914.2	ILMN_2218780	0001110192	S	3746	GTCTGCAGTCTGGAAGCTTGTCTGCTCTATAGAAATGAAAATGCAGCATG	8	+	95007019-95007068	8q22.1b	Homo sapiens protein phosphatase 2C, magnesium-dependent, catalytic subunit (PPM2C), nuclear gene encoding mitochondrial protein, mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]	PDPC; PDP1; FLJ32517; PDH; PDP; MGC119646	PDPC; PDP1; FLJ32517; PDH; PDP; MGC119646
Homo sapiens	RefSeq	NM_138723.1	ILMN_14640	BCL2L14	NM_138723.1	NM_138723.1		79370	21040329	NM_138723.1	BCL2L14	NP_620049.1	ILMN_1717976	0003170767	I	40	GGGGCTCTAAACTACCTGAGTCTTTCCAAACGACAAGCCAAGAAGACCTG	12	+	12115184-12115233	12p13.2a	Homo sapiens BCL2-like 14 (apoptosis facilitator) (BCL2L14), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11054413] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 43229] [pmid 11054413] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11054413] [evidence IPI]	BCLG	BCLG
Homo sapiens	RefSeq	NM_138724.1	ILMN_14640	BCL2L14	NM_138723.1	NM_138723.1		79370	21040329	NM_138723.1	BCL2L14	NP_620049.1	ILMN_1773925	0002060273	A	340	CTGCTGAGAACAAGAAGTTTGTCCCAGAGGGGCCTGGGGAATTGTTCAGC	12	+	12123645-12123694	12p13.2a	Homo sapiens BCL2-like 14 (apoptosis facilitator) (BCL2L14), transcript variant 4, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11054413] [evidence IDA]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 43229] [pmid 11054413] [evidence IDA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11054413] [evidence IPI]	BCLG	BCLG
Homo sapiens	RefSeq	NM_015025.2	ILMN_19837	MYT1L	NM_015025.2	NM_015025.2		23040	60498972	NM_015025.2	MYT1L	NP_055840.2	ILMN_1685582	0002190358	S	6544	GGGCCCCCATTGTTCATAACAGCATATGCATTTCCCCACCGCGTTGTGTC	2	-	1874858-1874907	2p25.3e-p25.3d	Homo sapiens myelin transcription factor 1-like (MYT1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]		
Homo sapiens	RefSeq	NM_001001939.1	ILMN_2950	PCBD1	NM_000281.2	NM_000281.2		5092	50086629	NM_000281.2	PCBD1	NP_000272.1	ILMN_1795906	0004860184	A	298	TGCTGCCAAACCTGAGGGCTGTGGGGTGGAATGAGCTGGAAGGCCGTGAT	10	-	72645593-72645642	10q22.1c	Homo sapiens pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (PCBD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits [goid 51289] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of nonidentical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51291] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 1763325] [evidence TAS]; Catalysis of the reaction: L-phenylalanine + tetrahydrobiopterin + O2 = L-tyrosine + 4-alpha-hydroxytetrahydrobiopterin [goid 4505] [evidence IEA]; Catalysis of the reaction: (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4-alpha-hydroxypterin = (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7,8-dihydro-6H-pterin + H2O [goid 8124] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16189514] [evidence IPI]	PHS; PCD; DCOH; PCBD	PHS; PCD; DCOH; PCBD
Homo sapiens	RefSeq	NM_000281.2	ILMN_2950	PCBD1	NM_000281.2	NM_000281.2		5092	50086629	NM_000281.2	PCBD1	NP_000272.1	ILMN_1786105	0003140021	I	707	GTGGGATGTGCCAGTGTCCCCACCAACACCAGGAATTTAGACCTTTTCCC	10	-	72643516-72643565	10q22.1c	Homo sapiens pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (PCBD1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine [goid 6729] [evidence IEA]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; The formation of a protein homotetramer, a macromolecular structure consisting of four noncovalently associated identical subunits [goid 51289] [evidence IEA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of nonidentical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51291] [evidence IEA]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 1763325] [evidence TAS]; Catalysis of the reaction: L-phenylalanine + tetrahydrobiopterin + O2 = L-tyrosine + 4-alpha-hydroxytetrahydrobiopterin [goid 4505] [evidence IEA]; Catalysis of the reaction: (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4-alpha-hydroxypterin = (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7,8-dihydro-6H-pterin + H2O [goid 8124] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 16189514] [evidence IPI]	PHS; PCD; DCOH; PCBD	PHS; PCD; DCOH; PCBD
Homo sapiens	RefSeq	NM_033027.2	ILMN_181018	AXUD1	NM_033027.2	NM_033027.2		64651	17136074	NM_033027.2	AXUD1	NP_149016.1	ILMN_1703123	0007560041	S	3107	GGCCTTGCCAGCCTGTGTGCTTGTGGGAACACCTTGTACCTGAGCTTACA	3	-	39158376-39158425	3p22.2a	Homo sapiens AXIN1 up-regulated 1 (AXUD1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 17726538] [evidence ISS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11526492] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 17726538] [evidence ISS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 17726538] [evidence ISS]	FAM130B; TAIP-3; DKFZp566F164; URAX1	FAM130B; TAIP-3; DKFZp566F164; URAX1
Homo sapiens	RefSeq	NM_001035254.1	ILMN_30005	FAM102A	NM_001035254.1	NM_001035254.1		399665	78191786	NM_001035254.1	FAM102A	NP_001030331.1	ILMN_2291455	0006350082	I	325	CTTCCGTGTGTCTGTGCGCAAGGAGCTGAAAGGCGGGAAGGCTTATTCCA	9	-	130715855-130715883:130716084-130716104	9q34.11a	Homo sapiens family with sequence similarity 102, member A (FAM102A), transcript variant 1, mRNA.				MGC50853; C9orf132; EEIG1; bA203J24.7	MGC50853; C9orf132; EEIG1; bA203J24.7
Homo sapiens	RefSeq	NM_001035254.1	ILMN_30005	FAM102A	NM_001035254.1	NM_001035254.1		399665	78191786	NM_001035254.1	FAM102A	NP_001030331.1	ILMN_2401779	0003840215	A	3768	ACATTGTTAGGGGAACTCAGGCTAGTGTCAGCGTCTTGGTTTGGGGAGAA	9	-	130702887-130702936	9q34.11a	Homo sapiens family with sequence similarity 102, member A (FAM102A), transcript variant 1, mRNA.				MGC50853; C9orf132; EEIG1; bA203J24.7	MGC50853; C9orf132; EEIG1; bA203J24.7
Homo sapiens	RefSeq	NM_203305.1	ILMN_30005	FAM102A	NM_001035254.1	NM_001035254.1		399665	78191786	NM_001035254.1	FAM102A	NP_001030331.1	ILMN_1745112	0001850546	S	3171	AGACTCCTCCAGACCAGGAACCCCAGAAGGAGACAGAGCCTGCCACATCC	9	-	130703484-130703533	9q34.11a	Homo sapiens family with sequence similarity 102, member A (FAM102A), transcript variant 1, mRNA.				MGC50853; C9orf132; EEIG1; bA203J24.7	MGC50853; EEIG1; bA203J24.7
Homo sapiens	RefSeq	NM_002795.2	ILMN_20961	PSMB3	NM_002795.2	NM_002795.2		5691	22538464	NM_002795.2	PSMB3	NP_002786.2	ILMN_1748651	0003710332	S	591	GCTGAATGCTGTGGACCGGGATGCAGTGTCAGGCATGGGAGTCATTGTCC	17	+	34172228-34172277	17q12c	Homo sapiens proteasome (prosome, macropain) subunit, beta type, 3 (PSMB3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex [goid 5839] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile [goid 4298] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	HC10-II; MGC4147	HC10-II; MGC4147
Homo sapiens	RefSeq	NR_002819.1	ILMN_16418	MALAT1	NR_002819.1	NR_002819.1		378938	84872103	NR_002819.1	MALAT1		ILMN_2141650	0006480019	S	8201	CAGTCTCACTTTGTCCCCCAGGCTGGAGTGTAGTGGCATGATCTCTGCAA	11	+	65030844-65030893	11q13.1c	Homo sapiens metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) (MALAT1), non-coding RNA.				MALAT-1	MALAT-1
Homo sapiens	RefSeq	NM_016328.1	ILMN_17028	GTF2IRD1	NM_016328.1	NM_016328.1		9569	7705386	NM_016328.1	GTF2IRD1	NP_057412.1	ILMN_1669717	0004900187	I	47	GGCCGGGGCGAATGGCTGGCAATCTTACTGGGATTACAGAACAAAGAGCC	7	+	73506102-73506151	7q11.23c	Homo sapiens GTF2I repeat domain containing 1 (GTF2IRD1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11438732] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10575229] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 9774679] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	hMusTRD1alpha1; WBSCR11; CREAM1; WBSCR12; RBAP2; MUSTRD1; WBS; GTF3	hMusTRD1alpha1; WBSCR11; CREAM1; WBSCR12; RBAP2; MUSTRD1; WBS; GTF3
Homo sapiens	RefSeq	NM_005685.2	ILMN_17028	GTF2IRD1	NM_016328.1	NM_016328.1		9569	7705386	NM_016328.1	GTF2IRD1	NP_057412.1	ILMN_1712628	0004200577	A	3163	AACCCGGATTCAGTGGCATCGGCCAACCAGATCTCACTCGTGCAATGGCC	7	+	73653402-73653443:73654628-73654635	7q11.23c	Homo sapiens GTF2I repeat domain containing 1 (GTF2IRD1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11438732] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 10575229] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Functions to initiate or regulate RNA polymerase II transcription by binding an enhancer region of DNA [goid 3705] [pmid 9774679] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	hMusTRD1alpha1; WBSCR11; CREAM1; WBSCR12; RBAP2; MUSTRD1; WBS; GTF3	hMusTRD1alpha1; WBSCR11; CREAM1; WBSCR12; RBAP2; MUSTRD1; WBS; GTF3
Homo sapiens	RefSeq	XR_038232.1	ILMN_344214	LOC652794	XR_038232.1	XR_038232.1		652794	169217689	XR_038232.1	LOC652794		ILMN_3242982	0000990673	S	1044	CCCTTCTGTACCTGCGCTTGCACTGGCCCAACATGGAGCTGTGTGGCAAT					PREDICTED: Homo sapiens misc_RNA (LOC652794), miscRNA.					
Homo sapiens	RefSeq	NM_207305.2	ILMN_18390	FOXD4	NM_207305.2	NM_207305.2		2298	75677593	NM_207305.2	FOXD4	NP_997188.2	ILMN_1786473	0004040041	S	1699	TCCCGCTGGAGAGCAAACACGAACTTCTGTTCCCTGCAAAATGGTTAGAA	9	-	106671-106720	9p24.3b	Homo sapiens forkhead box D4 (FOXD4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9325056] [evidence TAS]; The function of causing local conformational micropolymorphism of DNA in which the original B-DNA structure is only distorted but not extensively modified [goid 8301] [pmid 7957066] [evidence ISS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 7957066] [evidence ISS]	FOXD4A; MGC105106; FREAC5; FKHL9	FOXD4A; MGC105106; FREAC5; FKHL9
Homo sapiens	RefSeq	NM_194330.2	ILMN_40598	RNF38	NM_194330.2	NM_194330.2		152006	89903029	NM_194330.2	RNF38	NP_919311.1	ILMN_2273882	0006060167	I	15	TGGAAACAAAGGGGGTTCGGCGCGCGGTGCGGAGCCTGGGGGAAAAGGGA	9	-	36401131-36401180	9p13.2b	Homo sapiens ring finger protein 38 (RNF38), transcript variant 5, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ21343	FLJ21343
Homo sapiens	RefSeq	XM_001131140.1	ILMN_164143	LOC729731	XM_001131140.1	XM_001131140.1		729731	113416500	XM_001131140.1	LOC729731	XP_001131140.1	ILMN_3245028	0000240114	S	239	AGGAGAGCAAGCCCACCGTGGATGCGGAGGAGGCTCAGAGGATGACAACC	5	-	17631181-17631230	5p15.1a	PREDICTED: Homo sapiens similar to hCG1809904 (LOC729731), mRNA.					
Homo sapiens	RefSeq	NM_001002838.1	ILMN_4760	WNK3	NM_001002838.1	NM_001002838.1		65267	50845415	NM_001002838.1	WNK3	NP_001002838.1	ILMN_2394557	0001660598	A	7233	TAATGTTAAAGGCTAGTCACAGGGTTACCTAATGCTCAGTCTGTGAAACC	X	-	54239870-54239919	Xp11.22a	Homo sapiens WNK lysine deficient protein kinase 3 (WNK3), transcript variant 2, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16501604] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	KIAA1566; PRKWNK3	KIAA1566; PRKWNK3
Homo sapiens	RefSeq	NM_001002838.1	ILMN_4760	WNK3	NM_001002838.1	NM_001002838.1		65267	50845415	NM_001002838.1	WNK3	NP_001002838.1	ILMN_2394552	0003940187	A	6931	GGCTTTACAGGGTTCTCAGAGATGTGGGGTATACACTGTCCTGCAGTGAG	X	-	54240172-54240221	Xp11.22a	Homo sapiens WNK lysine deficient protein kinase 3 (WNK3), transcript variant 2, mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [evidence ISS]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16501604] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	KIAA1566; PRKWNK3	KIAA1566; PRKWNK3
Homo sapiens	RefSeq	NR_031633.1	ILMN_388559	MIR1302-4	NR_031633.1	NR_031633.1		100302130	269847203	NR_031633.1	MIR1302-4		ILMN_3309309	0006100037	S	44	TTTCTTAGAATAAGTATGTCTCCATGCAACATTTGGGACATACTTATGCT					Homo sapiens microRNA 1302-4 (MIR1302-4), microRNA.					
Homo sapiens	RefSeq	NM_001033082.1	ILMN_18918	MYCL1	NM_001033082.1	NM_001033082.1		4610	74315996	NM_001033082.1	MYCL1	NP_001028254.1	ILMN_1803650	0006770437	A	438	AATCCCGGGGCCACTCGAAAGGCTGGGGCAGGAACTACGCCTCCATCATA	1	-	40366836-40366885	1p34.2d	Homo sapiens v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian) (MYCL1), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]	MYCL; LMYC	MYCL; LMYC
Homo sapiens	RefSeq	XM_937266.1	ILMN_36997	LOC648220	XM_937266.1	XM_937266.1		648220	89065647	XM_937266.1	LOC648220	XP_942359.1	ILMN_1802218	0001030372	S	338	ACGGGTGGTATTAACAGTCCTGTGTTCTCGTGGACTGTAGAGGATGGTGC					PREDICTED: Homo sapiens hypothetical protein LOC648220 (LOC648220), mRNA.					
Homo sapiens	RefSeq	XM_934566.1	ILMN_40739	LOC653539	XM_934566.1	XM_934566.1		653539	88953844	XM_934566.1	LOC653539	XP_939659.1	ILMN_1654043	0003830592	A	129	CTTTTTGTTTTTAACCAGAGGACAGTCCATTTGTTTCACTTCTTTTTGCT	2	+	203589184-203589233		PREDICTED: Homo sapiens similar to amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 16, transcript variant 4 (LOC653539), mRNA.					
Homo sapiens	RefSeq	XM_934566.1	ILMN_40739	LOC653539	XM_934566.1	XM_934566.1		653539	88953844	XM_934566.1	LOC653539	XP_939659.1	ILMN_1671329	0001440646	I	4	TCTAAGAGCTTTGATGTATTTGAAATGTCTGAGATGTGGGCCTTTTCCTT	2	+	203588768-203588817		PREDICTED: Homo sapiens similar to amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 16, transcript variant 4 (LOC653539), mRNA.					
Homo sapiens	RefSeq	NM_153329.2	ILMN_23450	ALDH16A1	NM_153329.2	NM_153329.2		126133	34222200	NM_153329.2	ALDH16A1	NP_699160.1	ILMN_2051381	0000940441	S	2290	CGTCCAGGCCATGTGGTATTTCGGATCAGCCCAGGGTTCCCAGTTTGTCG	19	+	54664022-54664055:54665375-54665390	19q13.33b	Homo sapiens aldehyde dehydrogenase 16 family, member A1 (ALDH16A1), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC10204	MGC10204
Homo sapiens	RefSeq	NM_012133.2	ILMN_23766	COPG2	NM_012133.2	NM_012133.2		26958	66348036	NM_012133.2	COPG2	NP_036265.2	ILMN_1809496	0002030386	S	1395	GGCCCTGAGCCAGCAGATCAAGCAAATGTCTATCTTTGCGCATGGGTTGT	7	-	129933576-129933625	7q32.2b	Homo sapiens coatomer protein complex, subunit gamma 2 (COPG2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell [goid 5798] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules [goid 30117] [evidence IEA]; One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state [goid 30126] [pmid 11056392] [evidence IDA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG [goid 6890] [pmid 11030615] [evidence TAS]; The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network) [goid 6891] [pmid 11056392] [evidence IDA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ11781; 2-COP	FLJ11781; 2-COP
Homo sapiens	RefSeq	NM_002981.1	ILMN_8339	CCL1	NM_002981.1	NM_002981.1		6346	4506832	NM_002981.1	CCL1	NP_002972.1	ILMN_2086965	0001030204	S	122	GGCCGGAAGATGTGGACAGCAAGAGCATGCAGGTACCCTTCTCCAGATGT	17	-	32688892-32688915:32690105-32690130	17q12a	Homo sapiens chemokine (C-C motif) ligand 1 (CCL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2212659] [evidence TAS]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 9417093] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 9417093] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9417093] [evidence TAS]; The process by which a virus reproduces. Usually, this is by infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle [goid 16032] [pmid 9417093] [evidence TAS]	The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 9417093] [evidence TAS]	SCYA1; I-309; SISe; P500; TCA3	SISe; TCA3; SCYA1; I-309; P500
Homo sapiens	RefSeq	NM_138349.2	ILMN_23391	TP53I13	NM_138349.2	NM_138349.2		90313	34147526	NM_138349.2	TP53I13	NP_612358.3	ILMN_1666178	0001010647	S	1353	TCCTCCTTGTTGGTTGCTGAGTGGGCGGCCAAGGGGAGAAAAGGAGCCGC	17	+	24924201-24924250	17q11.2b	Homo sapiens tumor protein p53 inducible protein 13 (TP53I13), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DSCP1	DSCP1
Homo sapiens	RefSeq	NM_145052.1	ILMN_1103	UPRT	NM_145052.1	NM_145052.1		139596	21450815	NM_145052.1	UPRT	NP_659489.1	ILMN_2154101	0006100414	S	1752	CCGGGGATGTCTGGATGCTGACAAGGGAGAGCCAAGTACTGTTAATGCCA	X	+	74440764-74440813	Xq13.3a	Homo sapiens uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) (UPRT), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the reaction: UMP + diphosphate = uracil + 5-phospho-alpha-D-ribose 1-diphosphate [goid 4845] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	RP11-311P8.3; DKFZp781E1243; FUR1; MGC23937	RP11-311P8.3; DKFZp781E1243; FUR1; MGC23937
Homo sapiens	RefSeq	NM_032575.1	ILMN_3031	GLIS2	NM_032575.2	NM_032575.2		84662	110431363	NM_032575.2	GLIS2	NP_115964.2	ILMN_1710985	0000060239	S	1820	CTGTCATGCAGGGAGAGCTGTGCTCCTGGGTGCTGAAGCCTCGCTCCTGT	16	+	4327714-4327763	16p13.3b	Homo sapiens GLIS family zinc finger 2 (GLIS2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence ISS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence ISS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ38247; NPHP7	FLJ38247
Homo sapiens	RefSeq	XM_934956.1	ILMN_169494	LOC653643	XM_370876.4	XM_370876.4		653643	113425283	XM_370876.4	LOC653643	XP_370876.3	ILMN_1708126	0003120731	A	1967	GGAACTTGGGGCTGCCGGTGAGCAGGATGTTTTTTATGAAGTGAGCCTGG	15	+	73373627-73373655:73373742-73373762	15q24.2a	PREDICTED: Homo sapiens similar to Golgin subfamily A member 6 (Golgin linked to PML) (Golgin-like protein), transcript variant 1 (LOC653643), mRNA.					
Homo sapiens	RefSeq	NM_001013681.1	ILMN_22583	LOC401252	NM_001013681.1	NM_001013681.1		401252	61966814	NM_001013681.1	LOC401252	NP_001013703.1	ILMN_2125590	0001090524	S	3069	CATTGCCAAGTCAGTCCTAAGCCAAAAGAACAAAGCTGGAGGCATCACGC	6	+	32341204-32341253	6p21.32b	Homo sapiens hypothetical gene supported by AK123889 (LOC401252), mRNA.				FLJ40408	FLJ40408
Homo sapiens	RefSeq	NM_001013681.1	ILMN_22583	LOC401252	NM_001013681.1	NM_001013681.1		401252	61966814	NM_001013681.1	LOC401252	NP_001013703.1	ILMN_1722966	0003440373	S	1088	TCGAAGACTGTGGGACAAGTGCAGTATCTGTGCTGGAGTTCCTCAGGCTC	6	+	32339223-32339272	6p21.32b	Homo sapiens hypothetical gene supported by AK123889 (LOC401252), mRNA.				FLJ40408	FLJ40408
Homo sapiens	RefSeq	XM_930629.1	ILMN_308430	CDC14C	NR_003595.1	NR_003595.1		168448	150010613	NR_003595.1	CDC14C		ILMN_1751463	0007330041	I	2232	TGGGGGGCTTGCTCCCAAAAAGAATGACTCAAAGAAAGGCCCAGCTCTCA	7	+	48936934-48936983	7p12.3a	Homo sapiens CDC14 cell division cycle 14 homolog C (S. cerevisiae) (CDC14C), non-coding RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the reaction: protein serine/threonine/tyrosine phosphate + H2O = protein serine/threonine/tyrosine + phosphate [goid 8138] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate [goid 16791] [evidence IEA]	MGC26484; CDC14B2	
Homo sapiens	Unigene	Hs.475334	ILMN_95401	HS.475334	Hs.475334		Hs.475334		1665822	D87470			ILMN_1847308	0002630601	S	6618	CAGTCCGGAGTGTAAAGATTGGAAAGCCCCATGGCCTTGCCTGTGTGTAT	11	-	72789651-72789700		Human mRNA for KIAA0280 gene, partial cds					
Homo sapiens	RefSeq	NM_016190.1	ILMN_27942	CRNN	NM_016190.1	NM_016190.1		49860	7706634	NM_016190.1	CRNN	NP_057274.1	ILMN_1727220	0002100132	S	1724	ACCTGCTTTGCGGTGCAGACCCTCTCAGGAGCAGGAAGACTCAGAGCAAG	1	-	150648460-150648509	1q21.3b	Homo sapiens cornulin (CRNN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14967811] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 2980212] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 2631556] [evidence NAS]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 11606197] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [pmid 11606197] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 11606197] [evidence IDA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 2631556] [evidence IDA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 11056050] [evidence NAS]	SEP53; C1orf10; PDRC1	SEP53; C1orf10; PDRC1
Homo sapiens	RefSeq	NM_181843.1	ILMN_14871	NUDT8	NM_181843.1	NM_181843.1		254552	32469514	NM_181843.1	NUDT8	NP_862826.1	ILMN_2175659	0001430382	S	423	AGGTGAGCTGGGGGATATGAGGGGGTTGGGCTGTTCCAGTCCTCTGTCTA	11	-	67395745-67395775:67395776-67395794	11q13.2a	Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 8 (NUDT8), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	FLJ41567	FLJ41567
Homo sapiens	RefSeq	XM_939229.1	ILMN_34487	LOC650147	XM_939229.1	XM_939229.1		650147	89066177	XM_939229.1	LOC650147	XP_944322.1	ILMN_1799357	0004730475	S	242	CAGAGCGTATTCTGCCTGTCACCCCCAGTGCCCTCCCTGTGGAGCTTTAG					PREDICTED: Homo sapiens similar to Brain-specific angiogenesis inhibitor 1 precursor (LOC650147), mRNA.					
Homo sapiens	RefSeq	XM_942892.1	ILMN_39056	LOC647570	XM_942892.1	XM_942892.1		647570	89035864	XM_942892.1	LOC647570	XP_947985.1	ILMN_1804538	0004830463	S	95	CTCCCCAGCCATGCAGAACTGTCTGAAGTCGCAGTGGGCTCAACCAGCTC					PREDICTED: Homo sapiens hypothetical protein LOC647570 (LOC647570), mRNA.					
Homo sapiens	Unigene	Hs.538312	ILMN_103822	HS.538312	Hs.538312		Hs.538312		656262	T54401			ILMN_1831575	0007320403	S	53	CTGTTTACAAGAGCTTTGCTAGATGCTGTAGGGAGTGCAGGGGTGAGCAG	10	-	122404609-122404658		ya93d04.r1 Stratagene placenta (#937225) Homo sapiens cDNA clone IMAGE:69223 5, mRNA sequence					
Homo sapiens	RefSeq	XM_932098.1	ILMN_35939	LOC644277	XM_932098.1	XM_932098.1		644277	89034338	XM_932098.1	LOC644277	XP_937191.1	ILMN_1784707	0002470022	S	181	CATTCCACTCTCATCCTCAACCCAGATCTGCAGGACCCCAGCCAGGCCCA	11	+	110813846-110813895	11q23.1b	PREDICTED: Homo sapiens hypothetical protein LOC644277 (LOC644277), mRNA.					
Homo sapiens	RefSeq	XR_038235.1	ILMN_340638	LOC100132863	XR_038235.1	XR_038235.1		100132863	169179399	XR_038235.1	LOC100132863		ILMN_3282529	0005390176	M	370	GACATTGCTGCAGATGGCAAGCAGCCTTCTGAAAAGAAGGCTGCAAAGCT				9q33.2a	PREDICTED: Homo sapiens misc_RNA (LOC100132863), miscRNA.					
Homo sapiens	RefSeq	XM_933421.1	ILMN_43221	LOC653425	XM_933421.1	XM_933421.1		653425	89027798	XM_933421.1	LOC653425	XP_938514.1	ILMN_1660071	0003800594	A	623	CTTCCAGCTAGATGTCTGCATGAACTACTGAAAGCTGCTGAGTGTCTTGC	8	+	7856174-7856184:7856185-7856223		PREDICTED: Homo sapiens similar to zinc finger protein 75, transcript variant 2 (LOC653425), mRNA.					
Homo sapiens	Unigene	Hs.127009	ILMN_76355	HS.127009	Hs.127009		Hs.127009		21478544	BQ575227			ILMN_1888558	0002810553	S	270	CTATTGTGCCAAAAATGGCCCCAGGGTAGGTTGGGAGAGAAGCAGAGCTG	6	-	111658766-111658815		UI-H-EZ1-bbe-e-05-0-UI.s1 NCI_CGAP_Ch2 Homo sapiens cDNA clone UI-H-EZ1-bbe-e-05-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_052928.1	ILMN_162160	SMYD4	NM_052928.1	NM_052928.1		114826	46195756	NM_052928.1	SMYD4	NP_443160.1	ILMN_2086238	0006350240	S	3987	GCCTGCTTACCTCCAGAGACACACCGTTCCACTTACAGTATCTAGCTTCC	17	-	1629795-1629844	17p13.3d	Homo sapiens SET and MYND domain containing 4 (SMYD4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1936; ZMYND21	KIAA1936; ZMYND21
Homo sapiens	RefSeq	NM_198856.1	ILMN_5555	EFCAB6	NM_198856.1	NM_198856.1		64800	38570108	NM_198856.1	EFCAB6	NP_942153.1	ILMN_2388403	0002260494	A	4174	GCGGCGCACGTTCAAAAGCTATGATGAGGCTGGAACAGGGCTGCTAAGCG	22	-	43926711-43926760	22q13.2c	Homo sapiens EF-hand calcium binding domain 6 (EFCAB6), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DJBP; HSCBCIP1; FLJ23588; KIAA1672; dJ185D5.1	DJBP; HSCBCIP1; FLJ23588; KIAA1672; dJ185D5.1
Homo sapiens	RefSeq	NM_003717.1	ILMN_11221	NPFF	NM_003717.1	NM_003717.1		8620	4503768	NM_003717.1	NPFF	NP_003708.1	ILMN_1682503	0003370338	S	409	ATCCTGGAGGAATGAATGGCTGAGTCCCCGGGCTGGAGAGGGGCTGAATT	12	-	52186874-52186923	12q13.13e	Homo sapiens neuropeptide FF-amide peptide precursor (NPFF), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9224703] [evidence TAS]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 10851242] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9224703] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 9224703] [evidence TAS]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 10851242] [evidence TAS]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IEA]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IEA]	FMRFAL	FMRFAL
Homo sapiens	Unigene	Hs.543097	ILMN_106761	HS.543097	Hs.543097		Hs.543097		23287801	BU621586			ILMN_1880430	0002480491	S	504	TGGCAAGGATCCAGGACCAGGGGATCATCGAGGACCACAGAAGAGAGAGG	3	-	72183664-72183713		UI-H-FL1-bga-d-03-0-UI.s1 NCI_CGAP_FL1 Homo sapiens cDNA clone UI-H-FL1-bga-d-03-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_003722.3	ILMN_171409	TP73L	NM_003722.3	NM_003722.3		8626	31543817	NM_003722.3	TP73L	NP_003713.3	ILMN_2138801	0006060131	S	4375	AGCGAGGCACCCTTACTGGCTTACCTCCTCATGGCAGCCTACTCTCCTTG	3	+	191097228-191097277	3q28b	Homo sapiens tumor protein p73-like (TP73L), mRNA.				TP63; EEC3; p63; B(p51B); p73H; p51; SHFM4; OFC8; RHS; KET; B(p51A); LMS; p73L	TP63; EEC3; p63; B(p51B); p73H; p51; SHFM4; OFC8; RHS; KET; B(p51A); LMS; p73L
Homo sapiens	RefSeq	NM_003762.2	ILMN_42259	VAMP4	NM_003762.3	NM_003762.3		8674	89191866	NM_003762.3	VAMP4	NP_003753.2	ILMN_1761363	0002100722	I	963	TTTAATGGCATAAGGACTTGCATTATTGCATTAGGGAGCGGGTCATGCTG	1	-	171673273-171673322	1q24.3b	Homo sapiens vesicle-associated membrane protein 4 (VAMP4), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9553086] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 9553086] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 9553086] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		VAMP24	VAMP24
Homo sapiens	RefSeq	NM_003762.2	ILMN_42259	VAMP4	NM_003762.3	NM_003762.3		8674	89191866	NM_003762.3	VAMP4	NP_003753.2	ILMN_1804676	0003870520	A	510	GCAACAGATCCAAACAACTTCGAAGGCAAATGTGGTGGCGTGGATGCAAA	1	-	171675558-171675558:171678805-171678853	1q24.3b	Homo sapiens vesicle-associated membrane protein 4 (VAMP4), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9553086] [evidence TAS]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 9553086] [evidence TAS]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 9553086] [evidence TAS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]		VAMP24	VAMP24
Homo sapiens	Unigene	Hs.573015	ILMN_125196	HS.573015	Hs.573015		Hs.573015		80958005	DA380412			ILMN_1850583	0003520142	S	261	GAGCTGCCTGCCATGATATGAAAAAGATCTCCATTCCTCCAGTTTCCAAT					DA380412 BRTHA2 Homo sapiens cDNA clone BRTHA2013601 5, mRNA sequence					
Homo sapiens	RefSeq	XM_496071.2	ILMN_46589	LOC440280	XM_496071.2	XM_496071.2		440280	89038409	XM_496071.2	LOC440280	XP_496071.2	ILMN_1799069	0002850068	S	3557	GGGTTCTGTAAAGCCTGAACTCCCTTTTAAAAGTGCCTAGTGATAGAGGC	15	-	54083357-54083406		PREDICTED: Homo sapiens similar to CCR4-NOT transcription complex, subunit 6-like isoform 1 (LOC440280), mRNA.					
Homo sapiens	RefSeq	NM_005882.3	ILMN_16197	MAEA	NM_005882.3	NM_005882.3		10296	62953128	NM_005882.3	MAEA	NP_005873.2	ILMN_2327090	0000150528	A	960	TCCGCCCATGATGCTGCCCAACGGCTACGTCTACGGCTACAATTCTCTGC	4	+	1309376-1309388:1311415-1311451	4p16.3c	Homo sapiens macrophage erythroblast attacher (MAEA), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9763581] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [pmid 16510120] [evidence IDA]; A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two daughter cells. In animal cells, the contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis [goid 5826] [pmid 16510120] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 16510120] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9763581] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 16510120] [evidence IDA]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9763581] [evidence IDA]; Any process that modulates the rate or extent of progress through the mitotic cell cycle [goid 7346] [pmid 16510120] [evidence NAS]; Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptosis [goid 33033] [pmid 9763581] [evidence IDA]; A developmental process, independent of morphogenetic (shape) change, that is required for an erythrocyte to attain its fully functional state [goid 43249] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 16510120] [evidence IDA]	EMLP; HLC-10; EMP; PIG5	EMLP; HLC-10; EMP; PIG5
Homo sapiens	RefSeq	XR_017478.1	ILMN_176238	LOC647157	XR_017478.1	XR_017478.1		647157	113426060	XR_017478.1	LOC647157		ILMN_3235571	0005290424	S	720	TGCCATAGTCTCTATAAGGAACGTATGCATTAGTCTGCTGGCAGGAATTG	16	+	32344614-32344663	16p11.2b	PREDICTED: Homo sapiens misc_RNA (LOC647157), miscRNA.					
Homo sapiens	RefSeq	XM_944659.1	ILMN_33925	LOC654000	XM_944659.1	XM_944659.1		654000	89031984	XM_944659.1	LOC654000	XP_949752.1	ILMN_1658034	0006900138	I	4373	GGAGAGTGCTTAAAATAATTGTGAAAGGTGTGAAATGTCACAGCCGGGGC					PREDICTED: Homo sapiens similar to Ribosome biogenesis protein BMS1 homolog, transcript variant 4 (LOC654000), mRNA.					
Homo sapiens	RefSeq	XM_945181.1	ILMN_169962	LOC644743	XR_016703.1	XR_016703.1		644743	113408554	XR_016703.1	LOC644743		ILMN_1769187	0007650221	S	1350	TATCCATACGAAGACCACCAGCAGCTATGCAGGTGCGCTGAGCTCGGCCT	1	-	44341750-44341799	1p34.1e	PREDICTED: Homo sapiens hypothetical LOC644743 (LOC644743), mRNA.					
Homo sapiens	RefSeq	XM_932346.1	ILMN_169962	LOC644743	XR_016703.1	XR_016703.1		644743	113408554	XR_016703.1	LOC644743		ILMN_1671971	0000020044	S	1295	GGAAGCTGCTAGAGGGCGAGGAGAGCCGGCTGGAGTCTGGGATGCAGAAC	1	-	44341805-44341854	1p34.1e	PREDICTED: Homo sapiens hypothetical LOC644743 (LOC644743), mRNA.					
Homo sapiens	Unigene	Hs.541752	ILMN_105912	HS.541752	Hs.541752		Hs.541752		2064044	AA406061			ILMN_1823128	0006290113	S	81	CTTTGGGCACCATTTGGATATAGTTAGTGGTGGTTTAGCTATGGCGTTCC	2	+	139071839-139071888		zu67a08.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:743030 3, mRNA sequence					
Homo sapiens	RefSeq	XR_019540.2	ILMN_172896	LOC645744	XR_019540.2	XR_019540.2		645744	169211760	XR_019540.2	LOC645744		ILMN_3212729	0007330382	A	1196	CCCTGATATGCCCAGCCCTATTCTGCAGAACGATGCTGCCCTGGAGGTCT				17q12a	PREDICTED: Homo sapiens misc_RNA (LOC645744), miscRNA.					
Homo sapiens	RefSeq	NM_007144.2	ILMN_11878	PCGF2	NM_007144.2	NM_007144.2		7703	37595566	NM_007144.2	PCGF2	NP_009075.1	ILMN_1809859	0003830296	S	2385	CGCTGCCCACCGAGATTTCCTCAAGTGTGCATAGATCTGAGAGGAGTCGG	17	-	36890319-36890368	17q12c	Homo sapiens polycomb group ring finger 2 (PCGF2), mRNA.	A condensed mass of compacted chromatin that represents an inactivated X chromosome [goid 1739] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins [goid 16604] [evidence IEA]; A chromatin-associated multiprotein complex containing Polycomb Group proteins. In Drosophila, Polycomb group proteins are involved in the long-term maintenance of gene repression, and PcG protein complexes associate with Polycomb group response elements (PREs) in target genes to regulate higher-order chromatin structure [goid 31519] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The modification of histones by addition of acetyl groups [goid 16573] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8325509] [evidence TAS]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC10545; MEL-18; RNF110; ZNF144	MGC10545; RNF110; MEL-18; ZNF144
Homo sapiens	RefSeq	NM_138738.2	ILMN_3325	FCRL2	NM_138738.2	NM_138738.2		79368	74048626	NM_138738.2	FCRL2	NP_620075.1	ILMN_1761873	0000780008	I	166	GAGGGCTGGATGGGCACAGGAAAACAATCAGATGAGAACAACAGATGACC	1	-	156004124-156004173	1q23.1d	Homo sapiens Fc receptor-like 2 (FCRL2), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 11162587] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11162587] [evidence NAS]	Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 11162587] [evidence NAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 11162587] [evidence IPI]	SPAP1B; IFGP4; FCRH2; SPAP1A; SPAP1C; SPAP1; IRTA4	SPAP1B; IFGP4; FCRH2; SPAP1A; SPAP1C; SPAP1; IRTA4
Homo sapiens	RefSeq	XM_942518.1	ILMN_35503	LOC389906	XM_942518.1	XM_942518.1		389906	89060613	XM_942518.1	LOC389906	XP_947611.1	ILMN_1771554	0006130286	I	160	AACCTCGACATTCATGGCAGCAGCTCCACGGGAGGAGAAAAGATGGGCCG				Xp22.33a	PREDICTED: Homo sapiens similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1) (LOC389906), mRNA.					
Homo sapiens	RefSeq	XM_001716641.1	ILMN_338307	LOC100128336	XM_001716641.1	XM_001716641.1		100128336	169215356	XM_001716641.1	LOC100128336	XP_001716693.1	ILMN_3256789	0002070465	M	605	ACTGTGACCTACGTCCCTGCCTCGGGATTTCTTTCCAGGAGCGCTGGGTT	21	+	46396832-46396881	21q22.3f	PREDICTED: Homo sapiens hypothetical LOC100128336 (LOC100128336), mRNA.					
Homo sapiens	RefSeq	NM_001005334.1	ILMN_171722	OR3A4	NM_001005334.1	NM_001005334.1		390756	52839874	NM_001005334.1	OR3A4	NP_001005334.1	ILMN_1751645	0003520445	S	809	CTTCGGACAAGGACAAGGGCATTGGCATCCTCAACACTGTCATCAGCCCC	17	+	3161163-3161212	17p13.3a	Homo sapiens olfactory receptor, family 3, subfamily A, member 4 (OR3A4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8004088] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 8004088] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 8004088] [evidence NAS]	OR17-24; OR17-13; OLFRA06; OLFRA05; OR24; OR17-16; OR25; OR3A4P; OR3A5P; OR17-25	OR17-24; OR24; OR3A4P; OR3A5P; OR17-13; OLFRA06; OLFRA05; OR17-16; OR25; OR17-25
Homo sapiens	RefSeq	XM_001717259.1	ILMN_341872	LOC100128013	XM_001717259.1	XM_001717259.1		100128013	169211248	XM_001717259.1	LOC100128013	XP_001717311.1	ILMN_3184512	0004730239	A	70	CGCCCCCGGCTAACCTGGCTGAGTCAGGTACACCAGCAGGAGCAGAAGCA				17p13.2c	PREDICTED: Homo sapiens hypothetical protein LOC100128013 (LOC100128013), mRNA.					
Homo sapiens	RefSeq	NM_019113.2	ILMN_9969	FGF21	NM_019113.2	NM_019113.2		26291	68215584	NM_019113.2	FGF21	NP_061986.1	ILMN_1772789	0005700594	S	363	CGCTGCTGACCAGAGCCCCGAAAGTCTCCTGCAGCTGAAAGCCTTGAAGC	19	+	49259706-49259728:49260183-49260209	19q13.33a	Homo sapiens fibroblast growth factor 21 (FGF21), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10858549] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10858549] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10858549] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10858549] [evidence TAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Homo sapiens	RefSeq	NM_019113.2	ILMN_9969	FGF21	NM_019113.2	NM_019113.2		26291	68215584	NM_019113.2	FGF21	NP_061986.1	ILMN_2056569	0006200392	S	543	ATACAATGTTTACCAGTCCGAAGCCCACGGCCTCCCGCTGCACCTGCCAG	19	+	49261240-49261289	19q13.33a	Homo sapiens fibroblast growth factor 21 (FGF21), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10858549] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 10858549] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10858549] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10858549] [evidence TAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]		
Homo sapiens	RefSeq	NM_152361.1	ILMN_8152	EID2B	NM_152361.1	NM_152361.1		126272	24308367	NM_152361.1	EID2B	NP_689574.1	ILMN_1798085	0004900626	S	1086	GGAATCCAGGTGTACCTGAGTTACTAGGATTGGAAGGCTATTGAGAGGAC	19	-	44714199-44714248	19q13.2a	Homo sapiens EP300 interacting inhibitor of differentiation 2B (EID2B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		EID-3; FLJ38944	EID-3; FLJ38944
Homo sapiens	RefSeq	NM_152361.1	ILMN_8152	EID2B	NM_152361.1	NM_152361.1		126272	24308367	NM_152361.1	EID2B	NP_689574.1	ILMN_2051900	0002350543	S	1374	AAAAGTATCGGCCGGGCGCACTGGCTTACGCCTGTAATCCCAGCACTTTG	19	-	44713911-44713960	19q13.2a	Homo sapiens EP300 interacting inhibitor of differentiation 2B (EID2B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		EID-3; FLJ38944	EID-3; FLJ38944
Homo sapiens	Unigene	Hs.382309	ILMN_88948	HS.382309	Hs.382309		Hs.382309		21961475	BC034632			ILMN_1864558	0005900687	S	421	GGGTTCAGTGATAGAGAAAGCCGGAGATGATGAGGCTGGGAGAGTAAGCT	6	-	136170826-136170875		Homo sapiens cDNA clone IMAGE:4828330					
Homo sapiens	RefSeq	NM_130897.1	ILMN_9895	DYNLRB2	NM_130897.1	NM_130897.1		83657	18702322	NM_130897.1	DYNLRB2	NP_570967.1	ILMN_1697317	0005340725	S	416	GCGATGGCCAAGGCTGTTTAAGCGACACTGGGTTGGAAACACTTGGCTCT	16	+	79141961-79142010	16q23.2a	Homo sapiens dynein, light chain, roadblock-type 2 (DYNLRB2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any dynein complex that catalyzes movement along a cytoplasmic microtubule; cytoplasmic dynein complexes participates in many transport activities in eukaryotes, such as mRNA localization, intermediate filament transport, nuclear envelope breakdown, apoptosis, transport of centrosomal proteins, mitotic spindle assembly, virus transport, kinetochore functions, and movement of signaling and spindle checkpoint proteins. Subunits associated with the dynein heavy chain mediate association between dynein heavy chain and cargoes,and may include light chains and light intermediate chains [goid 5868] [pmid 11750132] [evidence NAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [pmid 11750132] [evidence NAS]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [pmid 11750132] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12077152] [evidence NAS]	ROBLD2; DNLC2B; DNCL2B; MGC62033	ROBLD2; DNLC2B; DNCL2B; MGC62033
Homo sapiens	RefSeq	NM_003376.4	ILMN_5540	VEGFA	NM_003376.4	NM_003376.4		7422	71051577	NM_003376.4	VEGFA	NP_003367.4	ILMN_2375879	0002640224	A	3172	CCCTGGCTCCCCAGCACACATTCCTTTGAAATAAGGTTTCAATATACATC	6	+	43753792-43753841	6p21.1c	Homo sapiens vascular endothelial growth factor A (VEGFA), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9684805] [evidence EXP]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [pmid 14570917] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16490744] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 17470632] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 9684805] [evidence EXP]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [pmid 11427521] [evidence IDA]; The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [pmid 15015550] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 16490744] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [pmid 9202027] [evidence IDA]; Any process that activates or increases the rate or extent of endothelial cell proliferation [goid 1938] [evidence ISS]; Any process that activates or increases the frequency, rate, or extent of leukocyte migration [goid 2687] [pmid 1312256] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 15351965] [evidence TAS]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 10527820] [evidence IDA]; Any process that modulates the surface configuration of a cell [goid 8360] [pmid 7929439] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [pmid 7929439] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity [goid 30949] [pmid 1312256] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 10066377] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 11461089] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the migration of the endothelial cells of blood vessels [goid 43536] [pmid 9202027] [evidence IDA]; The series of molecular signals generated as a consequence of a platelet-derived growth factor receptor binding to one of its physiological ligands [goid 48008] [pmid 17470632] [evidence IDA]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [pmid 12744932] [evidence NAS]	Interacting selectively with a fibronectin, a group of related adhesive glycoproteins of high molecular weight found on the surface of animal cells, connective tissue matrices, and in extracellular fluids [goid 1968] [pmid 14570917] [evidence IDA]; Interacting selectively with the platelet-derived growth factor receptor [goid 5161] [pmid 17470632] [evidence IPI]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 15001987] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with vascular endothelial growth factor receptor 1 [goid 43183] [pmid 1312256] [evidence IPI]; Interacting selectively with vascular endothelial growth factor receptor 2 [goid 43184] [pmid 1417831] [evidence IPI]; Interacting selectively with any component on the surface of a cell [goid 43498] [pmid 17470632] [evidence IDA]; Interacting selectively with a component of the extracellular matrix [goid 50840] [pmid 14570917] [evidence IC ]	MGC70609; VPF; VEGF; VEGF-A	VPF; VEGF-A; MGC70609; VEGF
Homo sapiens	RefSeq	NM_003663.3	ILMN_163683	CGGBP1	NM_001008390.1	NM_001008390.1		8545	56550054	NM_001008390.1	CGGBP1	NP_001008391.1	ILMN_1752631	0003370687	A	4034	CAGTTCATCATTTGGTGCTTAGTCTTTGTAAGGGCTCTCTGTGGTTTGAC	3	-	88184245-88184294	3p11.2a	Homo sapiens CGG triplet repeat binding protein 1 (CGGBP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8626781] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 8626781] [evidence TAS]	CGGBP; p20-CGGBP	CGGBP; p20-CGGBP
Homo sapiens	RefSeq	NM_001008390.1	ILMN_163683	CGGBP1	NM_001008390.1	NM_001008390.1		8545	56550054	NM_001008390.1	CGGBP1	NP_001008391.1	ILMN_1797806	0002570193	I	414	GGATCCATGACTGTCTGATACGTTGGCAATTTAAAGTCCTTTTGAAAGAG	3	-	88189056-88189105	3p11.2a	Homo sapiens CGG triplet repeat binding protein 1 (CGGBP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8626781] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 8626781] [evidence TAS]	CGGBP; p20-CGGBP	CGGBP; p20-CGGBP
Homo sapiens	RefSeq	XR_037162.1	ILMN_342861	LOC647696	XR_037162.1	XR_037162.1		647696	169217377	XR_037162.1	LOC647696		ILMN_3285055	0001770398	M	1781	TTAAATTCTTCCAGAGAGCTATCCAAGTGGATCCAAATTATGCTTATGCC				2q21.2a	PREDICTED: Homo sapiens misc_RNA (LOC647696), miscRNA.					
Homo sapiens	RefSeq	XR_037162.1	ILMN_342861	LOC647696	XR_037162.1	XR_037162.1		647696	169217377	XR_037162.1	LOC647696		ILMN_3208546	0004390082	A	202	CTCTTGAAAGGACACAGTTGTCCTACACCACAATGCAAATACCTGCTTGC				2q21.2a	PREDICTED: Homo sapiens misc_RNA (LOC647696), miscRNA.					
Homo sapiens	RefSeq	NM_003355.2	ILMN_14172	UCP2	NM_003355.2	NM_003355.2		7351	13259540	NM_003355.2	UCP2	NP_003346.2	ILMN_1685625	0006580059	S	1297	AGGCTCCCTTCTGAGCCTCTCCTGCTGCTGACCTGATCACCTCTGGCTTT	11	-	73686015-73686051:73686052-73686064	11q13.4b	Homo sapiens uncoupling protein 2 (mitochondrial, proton carrier) (UCP2), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [pmid 9196039] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9196039] [evidence NAS]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [pmid 9054939] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	SLC25A8; UCPH	UCPH; SLC25A8
Homo sapiens	RefSeq	XR_037739.1	ILMN_352934	LOC729143	XR_037739.1	XR_037739.1		729143	169165457	XR_037739.1	LOC729143		ILMN_3306752	0004850193	M	2803	GGATGAGCTGCAGACAGCACTGTGGGACAAGAAGTACGCAAGTGACACCA				3p21.32b	PREDICTED: Homo sapiens misc_RNA (LOC729143), miscRNA.					
Homo sapiens	RefSeq	NM_001001411.2	ILMN_164475	ZNF676	NM_001001411.2	NM_001001411.2		163223	111548667	NM_001001411.2	ZNF676	NP_001001411.2	ILMN_3244291	0004730601	S	1687	GCCTTCACCTGGTCCTCAAGCTTTACTAAACACAAGAGAATTCATGCTGC	19	-	22363100-22363149	19p12c	Homo sapiens zinc finger protein 676 (ZNF676), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_138371.1	ILMN_9482	FAM113B	NM_138371.1	NM_138371.1		91523	19923900	NM_138371.1	FAM113B	NP_612380.1	ILMN_1712431	0004200541	S	1979	ACTTCCTGGGAGTGACCCAGCGTTATTCCTGCCTCCTCACTCCTATTCTC	12	+	45916614-45916663	12q13.11b	Homo sapiens family with sequence similarity 113, member B (FAM113B), mRNA.				MGC16044	MGC16044
Homo sapiens	RefSeq	NM_012155.1	ILMN_4890	EML2	NM_012155.1	NM_012155.1		24139	6912355	NM_012155.1	EML2	NP_036287.1	ILMN_3240541	0006660037	S	1854	CCTCGAGCCCTCAGCCACAAGTACGGTGGACACAGCAGCCATGTGACAAA	19	-	50804842-50804886:50808639-50808643	19q13.32a	Homo sapiens echinoderm microtubule associated protein like 2 (EML2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [pmid 10521658] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10521658] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10521658] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	EMAP2; EMAP-2; ELP70	EMAP2; EMAP-2; ELP70
Homo sapiens	RefSeq	XM_945008.1	ILMN_45285	LOC645581	XM_945008.2	XM_945008.2		645581	113422808	XM_945008.2	LOC645581	XP_950101.1	ILMN_1738957	0000020408	S	46	GAAGGACCAAGACAACATCATCCTTCAGAGGTCACTGAGCAGCAGCTTGC				11p14.3c	PREDICTED: Homo sapiens similar to mCG19417 (LOC645581), mRNA.					
Homo sapiens	RefSeq	NM_021622.3	ILMN_9430	PLEKHA1	NM_021622.3	NM_021622.3		59338	50234891	NM_021622.3	PLEKHA1	NP_067635.2	ILMN_2394250	0003930541	A	1240	GTAGACTTGGACGATGCGAGCCTTCCGGTCAGTGACGTGTGAGGCAGAAG	10	+	124172520-124172561:124173705-124173712	10q26.13b	Homo sapiens pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 (PLEKHA1), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester [goid 5543] [pmid 11001876] [evidence IDA]	TAPP1	TAPP1
Homo sapiens	RefSeq	NM_012474.3	ILMN_23283	UCK2	NM_012474.3	NM_012474.3		7371	20357519	NM_012474.3	UCK2	NP_036606.2	ILMN_1768662	0000620725	S	904	TCTCAACGGCTACACCCCTTCACGCAAGAGGCAGGCATCGGAGTCCAGCA	1	+	164143621-164143670	1q24.1a	Homo sapiens uridine-cytidine kinase 2 (UCK2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11306702] [evidence EXP]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Catalysis of the reaction: ATP + uridine = ADP + UMP [goid 4849] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]	UK; TSA903; UMPK	UK; TSA903; UMPK
Homo sapiens	RefSeq	NM_017911.1	ILMN_29127	FAM118A	NM_017911.1	NM_017911.1		55007	8923587	NM_017911.1	FAM118A	NP_060381.1	ILMN_1809147	0005290382	S	1576	TACCTCAGGGACCAGAATCCGTGGGAAGGGATGGACCTGGTGTTCCCGTT	22	+	44115193-44115242	22q13.31c	Homo sapiens family with sequence similarity 118, member A (FAM118A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C22orf8; FLJ20635	C22orf8; FLJ20635
Homo sapiens	Unigene	Hs.134166	ILMN_77531	HS.134166	Hs.134166		Hs.134166		4988584	AI700684			ILMN_1916182	0006270196	S	79	GGACTCCCTCCTAACAGCTGGAACTACAAGCATGAACCACTGCACCCAGC	14	+	73101276-73101325		we39c12.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2343478 3 similar to contains Alu repetitive element;contains element MER25 repetitive element ;, mRNA sequence					
Homo sapiens	Unigene	Hs.544029	ILMN_107514	HS.544029	Hs.544029		Hs.544029		2993284	AA883754			ILMN_1878016	0004200671	S	294	AGCTTGTCCAAGGTTCTGCCAAAGGAAGTCTCCTCTCTCTCGCTTATCTG	5	-	88240131-88240180		am14e07.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1466820 3, mRNA sequence					
Homo sapiens	RefSeq	XR_016425.2	ILMN_180525	LOC442153	XR_016425.2	XR_016425.2		442153	169169391	XR_016425.2	LOC442153		ILMN_3199896	0004850328	A	1146	AGCAGGATGATGCTGGCAGATGATGTAACCCTGGATGACTTGATCGTGGC	6	+	4648796-4648845	6p25.1c	PREDICTED: Homo sapiens misc_RNA (LOC442153), miscRNA.					
Homo sapiens	RefSeq	NM_032335.2	ILMN_21948	PHF6	NM_032335.2	NM_032335.2		84295	63478059	NM_032335.2	PHF6	NP_115711.2	ILMN_2325194	0002900398	A	785	TCCTATAGAGATAGGTCTCCACACAGAAGCAGCCCTAGTGACACCAGGCC	X	+	133375348-133375353:133375519-133375562	Xq26.2b	Homo sapiens PHD finger protein 6 (PHF6), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC14797; BORJ	MGC14797; BORJ
Homo sapiens	RefSeq	NM_207289.1	ILMN_22969	AAA1	NM_207289.1	NM_207289.1		404744	46402508	NM_207289.1	AAA1	NP_997172.1	ILMN_1675204	0005360113	I	495	GTAGACCATTTTCATGTGTATACCTCCTCTGAGTCACCCTCAGGTAGGGA	7	-	34574394-34574443	7p14.3a	Homo sapiens AAA1 protein (AAA1), transcript variant VII, mRNA.					
Homo sapiens	Unigene	Hs.126593	ILMN_76292	HS.126593	Hs.126593		Hs.126593		12601269	BG107423			ILMN_1883928	0000290193	S	378	TCTTGAACCATGAATTTAAGTGCCCACATTACTGGATAGTAGAGATGCCC	4	-	54568737-54568786		602277529F1 NIH_MGC_86 Homo sapiens cDNA clone IMAGE:4365390 5, mRNA sequence					
Homo sapiens	RefSeq	NM_032472.3	ILMN_12513	PPIL3	NM_130906.1	NM_130906.1		53938	19557635	NM_130906.1	PPIL3	NP_570981.1	ILMN_1770020	0004390390	A	951	GCAGGCATTTTTGAGTGGCCTGATTACATATTCCTCCCACAGCAAGTCCG	2	-	201444024-201444073	2q33.1e	Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 3 (PPIL3), transcript variant PPIL3b, mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18474220] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CYPJ	CYPJ
Homo sapiens	RefSeq	NM_130906.1	ILMN_12513	PPIL3	NM_130906.1	NM_130906.1		53938	19557635	NM_130906.1	PPIL3	NP_570981.1	ILMN_2393060	0007320326	A	354	GGAAGAGGAGGCAACAGTATTTGGGGCAAGAAGTTTGAGGATGAATACAG	2	-	201454401-201454450	2q33.1e	Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 3 (PPIL3), transcript variant PPIL3b, mRNA.	A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18474220] [evidence IPI]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	CYPJ	CYPJ
Homo sapiens	RefSeq	NM_020461.3	ILMN_21590	TUBGCP6	NM_020461.3	NM_020461.3		85378	56788363	NM_020461.3	TUBGCP6	NP_065194.2	ILMN_2412571	0002030307	A	5407	TGCAGCTGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCTC	22	-	50656926-50656975	22q13.33b	Homo sapiens tubulin, gamma complex associated protein 6 (TUBGCP6), mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A multiprotein complex composed of gamma-tubulin other non-tubulin proteins that forms a flexible open ring structure thought to be the unit of nucleation at the minus end of a microtubule [goid 8274] [pmid 11694571] [evidence IDA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IEA]	The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [pmid 11694571] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 11694571] [evidence IDA]	GCP6	GCP6
Homo sapiens	RefSeq	NM_020461.3	ILMN_21590	TUBGCP6	NM_020461.3	NM_020461.3		85378	56788363	NM_020461.3	TUBGCP6	NP_065194.2	ILMN_1766803	0002970402	A	5803	GTGCAGAGCACCCCAACTTTGCACTCATGCAGCAGTCCTACAACACCTTC	22	-	50656374-50656423	22q13.33b	Homo sapiens tubulin, gamma complex associated protein 6 (TUBGCP6), mRNA.	Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; A multiprotein complex composed of gamma-tubulin other non-tubulin proteins that forms a flexible open ring structure thought to be the unit of nucleation at the minus end of a microtubule [goid 8274] [pmid 11694571] [evidence IDA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [evidence IEA]	The 'de novo' formation of a microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule. Microtubule nucleation usually occurs from a specific site within a cell [goid 7020] [pmid 11694571] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 11694571] [evidence IDA]	GCP6	GCP6
Homo sapiens	RefSeq	NM_018374.2	ILMN_166250	TMEM106B	NM_018374.2	NM_018374.2		54664	40254892	NM_018374.2	TMEM106B	NP_060844.2	ILMN_2067607	0001740154	S	6210	GTAGCCTCCATCATGACACACTTACTACATTTATGAATTGAGCAGTTCTG	7	+	12243189-12243238	7p21.3a	Homo sapiens transmembrane protein 106B (TMEM106B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ11273; MGC33727	FLJ11273; MGC33727
Homo sapiens	RefSeq	NM_145860.1	ILMN_26567	PDCD10	NM_145859.1	NM_145859.1		11235	22538791	NM_145859.1	PDCD10	NP_665858.1	ILMN_1766024	0006420324	A	975	CAGTCCCTCCTGAAGGGATCTAATCCAGGATGTTGAATGGGATTATTGCC	3	-	168884651-168884700	3q26.1f	Homo sapiens programmed cell death 10 (PDCD10), transcript variant 2, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17657516] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TFAR15; MGC24477; CCM3; MGC1212	TFAR15; MGC24477; CCM3; MGC1212
Homo sapiens	RefSeq	NM_145859.1	ILMN_26567	PDCD10	NM_145859.1	NM_145859.1		11235	22538791	NM_145859.1	PDCD10	NP_665858.1	ILMN_1709396	0000020706	I	77	GGTCTCTTGTTTGGAAGTGACTAACAGCATTTTGGCATGAGAAAGCCCTA	3	-	168925887-168925936	3q26.1f	Homo sapiens programmed cell death 10 (PDCD10), transcript variant 2, mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17657516] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	TFAR15; MGC24477; CCM3; MGC1212	TFAR15; MGC24477; CCM3; MGC1212
Homo sapiens	RefSeq	NM_005163.2	ILMN_4201	AKT1	NM_005163.2	NM_005163.2		207	62241010	NM_005163.2	AKT1	NP_005154.2	ILMN_1748661	0007210424	I	140	AGATTCAGACCGGCAGGGGCGCTGTGGTTTAGGAGGGGCCTGGGGTTTCT	14	-	105259749-105259798	14q32.33b	Homo sapiens v-akt murine thymoma viral oncogene homolog 1 (AKT1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9829964] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10490848] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11274386] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9812896] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15718470] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9381178] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12244303] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11715018] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10485710] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10698680] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12167717] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12524439] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15183529] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15808505] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 14749367] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10698680] [evidence EXP]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [pmid 16280327] [evidence IMP]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides [goid 6006] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [pmid 10570282] [evidence TAS]; The process of apoptosis in activated T cells [goid 6924] [pmid 14749367] [evidence IMP]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10570282] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 14749367] [evidence IDA]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 8978681] [evidence IMP]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 15231831] [evidence EXP]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 10958679] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence IEA]; The directed movement of the hexose monosaccharide glucose into, out of, within or between cells [goid 15758] [evidence IEA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]; The posttranslational phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine [goid 18105] [pmid 16139227] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluid shear stress stimulus. Fluid shear stress is the force acting on an object in a system where the fluid is moving across a solid surface [goid 34405] [pmid 10376603] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IEA]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [pmid 10376603] [evidence IMP]; Any process that modulates the frequency, rate or extent of survival gene product expression; survival gene products are those that antagonize the apoptotic program. Regulation can be at the transcriptional, translational, or posttranslational level [goid 45884] [evidence IEA]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 16280327] [evidence TAS]; The series of molecular signals generated as a consequence of the insulin-like growth factor receptor binding to one of its physiological ligands [goid 48009] [pmid 8978681] [evidence IMP]; Any process that activates or increases the activity of the enzyme nitric-oxide synthase [goid 51000] [pmid 10376603] [evidence IMP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11994271] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 10490848] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 16139227] [evidence IDA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9829964] [evidence EXP]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 11274386] [evidence EXP]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 11994271] [evidence IC ]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Modulates the activity of nitric oxide synthase [goid 30235] [pmid 10376603] [evidence IMP]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 7891724] [evidence IPI]	RAC; MGC99656; PRKBA; RAC-ALPHA; PKB; AKT	RAC; MGC99656; PRKBA; RAC-ALPHA; PKB; AKT
Homo sapiens	RefSeq	XM_941659.1	ILMN_44528	ZYG11A	XM_941659.2	XM_941659.2		440590	113412192	XM_941659.2	ZYG11A	XP_946752.1	ILMN_1794932	0000670477	I	2289	TGCCTCAATTACTAAGACCGCCAGTTTCTTTCTGCCGCAGGCTAAGCTGC				1p32.3d	PREDICTED: Homo sapiens zyg-11 homolog A (C. elegans) (ZYG11A), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XM_001720730.1	ILMN_347100	LOC729456	XM_001720730.1	XM_001720730.1		729456	169172883	XM_001720730.1	LOC729456	XP_001720782.1	ILMN_3245245	0006860619	S	96	TTCAGGTTGGAAGGCCTGCTGAAGACCCCCTGTGGCCGTTCTCTGAGCTT	8	+	7912454-7912503	8p23.1e	PREDICTED: Homo sapiens hypothetical LOC729456 (LOC729456), mRNA.					
Homo sapiens	RefSeq	NM_152707.2	ILMN_165967	SLC25A16	NM_152707.2	NM_152707.2		8034	31652216	NM_152707.2	SLC25A16	NP_689920.1	ILMN_2115421	0000270746	S	2209	CTATGAGTGACTTACATGTGTTTTAAAATGTCAGTGTGTTTCCCAGAGGC	10	-	70242381-70242430	10q21.3d	Homo sapiens solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 (SLC25A16), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 2575220] [evidence NAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: solute A(out) + solute B(in) = solute A(in) + solute B(out) [goid 15300] [pmid 2575220] [evidence NAS]	ML7; GDA; MGC39851; GDC; HGT.1; D10S105E; hML7	ML7; hML7; GDA; MGC39851; GDC; HGT.1; D10S105E
Homo sapiens	RefSeq	NM_152707.2	ILMN_165967	SLC25A16	NM_152707.2	NM_152707.2		8034	31652216	NM_152707.2	SLC25A16	NP_689920.1	ILMN_1806032	0004260689	S	2044	GAAGCTGGACATGGTGGGATGGGCATGTGGTCCCAGCTACTCTGGAAGCT	10	-	70242546-70242595	10q21.3d	Homo sapiens solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 (SLC25A16), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 2575220] [evidence NAS]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: solute A(out) + solute B(in) = solute A(in) + solute B(out) [goid 15300] [pmid 2575220] [evidence NAS]	ML7; GDA; MGC39851; GDC; HGT.1; D10S105E; hML7	ML7; hML7; GDA; MGC39851; GDC; HGT.1; D10S105E
Homo sapiens	RefSeq	NM_020315.3	ILMN_22335	PDXP	NM_020315.4	NM_020315.4		57026	85815825	NM_020315.4	PDXP	NP_064711.1	ILMN_1736441	0003180273	S	1820	GGGGCTTTCGTGTCCCCCTGTGCGGTCAGTGTTTTCAGTACCACCTCTCT	22	+	36392700-36392749	22q13.1a	Homo sapiens pyridoxal (pyridoxine, vitamin B6) phosphatase (PDXP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: pyridoxal 5'-phosphate + H2O = pyridoxal + phosphate [goid 33883] [evidence IEA]	CIN; FLJ32703; PLP; dJ37E16.5	CIN; FLJ32703; PLP; dJ37E16.5
Homo sapiens	RefSeq	XM_931621.1	ILMN_18486	DSEL	NM_032160.2	NM_032160.2		92126	59938787	NM_032160.2	DSEL	NP_115536.1	ILMN_1671966	0000460451	S	331	CCCCAAGGGAGACGGAGGTGGAGAGTTCCAGAAAACTGCTCTGCACGGCG	18	-	65182719-65182729:65183598-65183636	18q22.1e	Homo sapiens dermatan sulfate epimerase-like (DSEL), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C18orf4	
Homo sapiens	RefSeq	NM_032160.2	ILMN_18486	DSEL	NM_032160.2	NM_032160.2		92126	59938787	NM_032160.2	DSEL	NP_115536.1	ILMN_1722680	0003610019	S	7145	GTACCTGTTGGCAGGAGAAGGCCAGATGGAGTATGTGGAGTAATAGGGAA	18	-	65175905-65175954	18q22.1e	Homo sapiens dermatan sulfate epimerase-like (DSEL), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C18orf4	C18orf4
Homo sapiens	RefSeq	NM_032160.2	ILMN_18486	DSEL	NM_032160.2	NM_032160.2		92126	59938787	NM_032160.2	DSEL	NP_115536.1	ILMN_2167915	0003850221	S	9149	CGTCGTTTTTCCTTCATACGTTATCTAGTTATGCAGCACTGGAAACAGAC	18	-	65173901-65173950	18q22.1e	Homo sapiens dermatan sulfate epimerase-like (DSEL), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C18orf4	C18orf4
Homo sapiens	RefSeq	NM_144651.2	ILMN_10072	PXDNL	NM_144651.2	NM_144651.2		137902	47271461	NM_144651.2	PXDNL	NP_653252.2	ILMN_1746954	0005810376	S	1677	AGTGTGGCAAGACTGCTGTGCAGATAAACAAGCTGGAGGCACGCCTGAGG	8	-	52395983-52396010:52446986-52447007	8q11.22d-q11.23a	Homo sapiens peroxidasin homolog-like (Drosophila) (PXDNL), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2) [goid 42744] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	FLJ25471	FLJ25471
Homo sapiens	RefSeq	NM_001615.3	ILMN_13364	ACTG2	NM_001615.3	NM_001615.3		72	63054873	NM_001615.3	ACTG2	NP_001606.1	ILMN_1795325	0004610431	S	1255	GTCAGAACAGGTTCTCCAAGGATCCCCTCGAGACTACTCTGTTACCAGTC	2	+	74000212-74000261	2p13.1b	Homo sapiens actin, gamma 2, smooth muscle, enteric (ACTG2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	ACTA3; ACTSG; ACTL3; ACTE; ACT	ACTA3; ACTSG; ACTL3; ACTE; ACT
Homo sapiens	RefSeq	XM_001718874.1	ILMN_349834	LOC100134739	XM_001718874.1	XM_001718874.1		100134739	169170364	XM_001718874.1	LOC100134739	XP_001718926.1	ILMN_3247341	0005690059	S	118	CGTCCAGCAGCGCCTGCAGCGGTCGCGCCTCGTCGGGCGACGGCTGGCAG	7	+	45999739-45999788		PREDICTED: Homo sapiens hypothetical protein LOC100134739 (LOC100134739), mRNA.					
Homo sapiens	RefSeq	NM_138333.3	ILMN_6342	FAM122A	NM_138333.3	NM_138333.3		116224	49472829	NM_138333.3	FAM122A	NP_612206.3	ILMN_1723353	0006350154	S	2960	GCCCCTGATTTTGCCTTAAGTTCTTGCCTGAGTGATCTCCCAGCCTGTCT	9	+	70587743-70587792	9q21.11a	Homo sapiens family with sequence similarity 122A (FAM122A), mRNA.				C9orf42; MGC17347	C9orf42; MGC17347
Homo sapiens	RefSeq	NM_172362.1	ILMN_162050	KCNH1	NM_172362.1	NM_172362.1		3756	27437000	NM_172362.1	KCNH1	NP_758872.1	ILMN_1745529	0002370433	I	1128	GCCTTTATGGGTGATCCAGGGAAGATTGGTTTTGCTGATCAGATTCCACC	1	-	209258772-209258821	1q32.2c	Homo sapiens potassium voltage-gated channel, subfamily H (eag-related), member 1 (KCNH1), transcript variant 1, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 9738473] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins [goid 160] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 9738473] [evidence TAS]; A process whereby non-proliferating myoblasts fuse to existing fibres or to myotubes to form new fibers. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers [goid 7520] [pmid 9738473] [evidence TAS]	Catalysis of the phosphorylation of a specific transcription regulator in response to the presence of a particular signal substance outside the cell [goid 155] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 9738473] [evidence TAS]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC142269; Kv10.1; EAG; h-eag; EAG1	MGC142269; Kv10.1; EAG; h-eag; EAG1
Homo sapiens	RefSeq	XM_001131730.1	ILMN_174878	LOC729907	XM_001131730.1	XM_001131730.1		729907	113411490	XM_001131730.1	LOC729907	XP_001131730.1	ILMN_3239659	0000070195	S	60	GGCTCAGAAACGCAGACCAGGTCCGTGGGCGCCTCGCTCCTGCGCTCTGA	1	-	159701294-159701343	1q23.3a	PREDICTED: Homo sapiens hypothetical LOC729907 (LOC729907), mRNA.					
Homo sapiens	RefSeq	NM_017934.4	ILMN_171544	PHIP	NM_017934.4	NM_017934.4		55023	38679895	NM_017934.4	PHIP	NP_060404.3	ILMN_1788689	0007000377	S	5542	GAGGATGACTCTGAAGAGGAGCAAAGGCAGCTGTTGTTCGAAGACACCTC	6	-	79707207-79707256	6q14.1c	Homo sapiens pleckstrin homology domain interacting protein (PHIP), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 11018022] [evidence NAS]	Interacting selectively with the insulin receptor [goid 5158] [pmid 11018022] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11018022] [evidence IPI]	FLJ20705; FLJ45918; ndrp; WDR11; MGC90216	FLJ20705; MGC90216; ndrp; WDR11
Homo sapiens	RefSeq	NM_003423.2	ILMN_163423	ZNF43	NM_003423.2	NM_003423.2		7594	68303808	NM_003423.2	ZNF43	NP_003414.2	ILMN_1768129	0005820010	S	3341	TCTAAGGCGCGGACACTTCAGACATTACACTAAATCAGTGCTAAGTACAG	19	-	21989578-21989627	19p12c	Homo sapiens zinc finger protein 43 (ZNF43), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11256614] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1711675] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	STK15; ZNF39L1; BTAK; DKFZp686L1854; KOX27; AURORA2; AURKA; ARK1; HTF6	HTF6; ZNF39L1; DKFZp686L1854; KOX27
Homo sapiens	RefSeq	NM_003423.2	ILMN_163423	ZNF43	NM_003423.2	NM_003423.2		7594	68303808	NM_003423.2	ZNF43	NP_003414.2	ILMN_2178201	0000620128	S	4945	GAGTTCTGGGACCACAGGCATGAGCCACTGCACCTGGCCAAATGTGTATA	19	-	21987974-21988023	19p12c	Homo sapiens zinc finger protein 43 (ZNF43), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11256614] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 1711675] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	STK15; ZNF39L1; BTAK; DKFZp686L1854; KOX27; AURORA2; AURKA; ARK1; HTF6	STK15; AURKA; HTF6; ZNF39L1; BTAK; DKFZp686L1854; KOX27; AURORA2; ARK1
Homo sapiens	RefSeq	XR_042395.1	ILMN_340243	LOC649352	XR_042395.1	XR_042395.1		649352	169172391	XR_042395.1	LOC649352		ILMN_3282032	0004260543	M	1337	CGAAGCCTGAGTTCAACGTCAGAAAACTTGAAGGTACCCTGCCTCCCAAC				8p23.1a	PREDICTED: Homo sapiens misc_RNA (LOC649352), miscRNA.					
Homo sapiens	Unigene	Hs.544686	ILMN_108053	HS.544686	Hs.544686		Hs.544686		11598885	BF513706			ILMN_1894709	0006560097	S	110	CTGGTGGGGGAGCAGGGCTTGTCTGTGTCTTTATCTTTCTTCTTCCAGGC	6	+	23446319-23446368		UI-H-BW1-amy-c-01-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3071592 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000723.3	ILMN_12167	CACNB1	NM_000723.3	NM_000723.3		782	40804467	NM_000723.3	CACNB1	NP_000714.3	ILMN_2240923	0003190056	I	3356	AGCCTGCTTCTTTGTCCTCGCCACATAGTCGTCAGCGTAGGCACCTGGGA	17	-	37329990-37330039	17q12c	Homo sapiens calcium channel, voltage-dependent, beta 1 subunit (CACNB1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential [goid 5891] [pmid 1385409] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a voltage-gated channel [goid 5245] [pmid 1385409] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CACNLB1; MGC41896; CAB1; CCHLB1	CACNLB1; MGC41896; CAB1; CCHLB1
Homo sapiens	RefSeq	NM_024553.2	ILMN_2803	CCDC132	NM_024553.2	NM_024553.2		55610	33469927	NM_024553.2	CCDC132	NP_078829.1	ILMN_2360362	0001110435	A	698	GCTGGAGGAGGAAGATTATCCAGGAGCTATTCAGTTGTGCCTTGAATGTC	7	+	92725634-92725640:92726798-92726840	7q21.3a	Homo sapiens coiled-coil domain containing 132 (CCDC132), transcript variant 2, mRNA.				KIAA1861; MGC176659; FLJ20097; FLJ23581	KIAA1861; MGC176659; FLJ20097; FLJ23581
Homo sapiens	RefSeq	NM_024553.2	ILMN_2803	CCDC132	NM_024553.2	NM_024553.2		55610	33469927	NM_024553.2	CCDC132	NP_078829.1	ILMN_1746417	0005490561	I	1076	TAGTGACTTAATTACTATTCATATATCTCTCCTTTAGATTTTAAATTTAT	7	+	92743559-92743595:92743596-92743608	7q21.3a	Homo sapiens coiled-coil domain containing 132 (CCDC132), transcript variant 2, mRNA.				KIAA1861; MGC176659; FLJ20097; FLJ23581	KIAA1861; MGC176659; FLJ20097; FLJ23581
Homo sapiens	RefSeq	XM_929199.1	ILMN_30796	LOC644250	XM_929199.1	XM_929199.1		644250	89036604	XM_929199.1	LOC644250	XP_934292.1	ILMN_1654320	0007160692	S	259	AAGTGGAGGTTGCAGTGAGATCGCGACACTGCACTCTAGCCTGGGCAGTA	13	-	47980580-47980629		PREDICTED: Homo sapiens hypothetical protein LOC644250 (LOC644250), mRNA.					
Homo sapiens	RefSeq	XM_943112.1	ILMN_307032	KIAA1211	NM_020722.1	NM_020722.1		57482	148806927	NM_020722.1	KIAA1211	NP_065773.1	ILMN_1772326	0003290288	A	678	CCAGTGATACGCCAAGTTCTCTAAGTCCTCTGAATCTCCCTGGAGCTGGA	4	+	56871590-56871639	4q12d	Homo sapiens KIAA1211 (KIAA1211), mRNA.				DKFZp564H1363	
Homo sapiens	RefSeq	NM_024747.4	ILMN_8947	HPS6	NM_024747.4	NM_024747.4		79803	31881784	NM_024747.4	HPS6	NP_079023.2	ILMN_1718537	0002940301	S	2443	CCTGGAGGCTTGCTTGGGACTGGAGGCTTGCTTGGACAGTTCCTCTGTGT	10	+	103817579-103817628	10q24.32a	Homo sapiens Hermansky-Pudlak syndrome 6 (HPS6), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an organelle within a cell. An organelle is an organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane [goid 6996] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	RP11-302K17.1; FLJ22501; MGC20522	RP11-302K17.1; FLJ22501; MGC20522
Homo sapiens	RefSeq	XM_927572.1	ILMN_36555	LOC644427	XM_927572.1	XM_927572.1		644427	89035793	XM_927572.1	LOC644427	XP_932665.1	ILMN_1723053	0002650053	S	577	CAGAGCTTTTTGTCGTTCCTTCTTTTGTCTCCAAGGTGTGGTTCTGACTG	12	-	126394668-126394717		PREDICTED: Homo sapiens hypothetical protein LOC644427 (LOC644427), mRNA.					
Homo sapiens	RefSeq	XM_932235.1	ILMN_165959	LOC728670	XM_001128097.1	XM_001128097.1		728670	113423479	XM_001128097.1	LOC728670	XP_001128097.1	ILMN_1672527	0004780181	S	1240	GCGGCGGGGACTGCACATCTGGCGCCCGCGGCGCGCACGGTCCGCGCACC	12	-	105056671-105056720	12q23.3c	PREDICTED: Homo sapiens similar to NUAK family, SNF1-like kinase, 1 (LOC728670), mRNA.					
Homo sapiens	RefSeq	NM_018127.4	ILMN_30230	ELAC2	NM_018127.5	NM_018127.5		60528	145553958	NM_018127.5	ELAC2	NP_060597.4	ILMN_1718044	0000060202	S	2664	AAGAGCACGGTCCCCCAGGAGGCAGCTCAGGATAGGTGGTATGGAGCTGT	17	-	12836722-12836771	17p12c	Homo sapiens elaC homolog 2 (E. coli) (ELAC2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ELC2; FLJ10530; FLJ36693; HPC2; FLJ42848	ELC2; FLJ10530; FLJ36693; HPC2; FLJ42848
Homo sapiens	RefSeq	XR_038406.1	ILMN_350809	LOC647086	XR_038406.1	XR_038406.1		647086	169210207	XR_038406.1	LOC647086		ILMN_3293972	0006020703	M	761	CACAAGGAGACTGTCTGGGGAAGGGATGGGGAGGGCCTGGGGTGGGTTCT				16p11.2c	PREDICTED: Homo sapiens misc_RNA (LOC647086), miscRNA.					
Homo sapiens	RefSeq	XM_942312.1	ILMN_306753	RPL22L1	NM_001099645.1	NM_001099645.1		200916	153791383	NM_001099645.1	RPL22L1	NP_001093115.1	ILMN_1797764	0001510743	A	1667	GTGCCCCCATCATCGTGCAATACCTCAGTGCAGCAACTCCTTGATTCTTG	3	-	172065604-172065653	3q26.2c	Homo sapiens ribosomal protein L22-like 1 (RPL22L1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	MGC104449	
Homo sapiens	RefSeq	NM_003646.2	ILMN_30149	DGKZ	NM_003646.3	NM_003646.3		8525	149999369	NM_003646.3	DGKZ	NP_003637.2	ILMN_1757143	0004830102	I	357	AAGGCGCCGCGGCGACTCAACAAGCGGCGCTTCCCGGGGCTGCGGCTCTT	11	+	46325888-46325937	11p11.2c	Homo sapiens diacylglycerol kinase, zeta 104kDa (DGKZ), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9716136] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [pmid 16286473] [evidence IGI]; Any process that stops, prevents or reduces the rate or extent of progression through the mitotic cell cycle [goid 45930] [pmid 16286473] [evidence IGI]	Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [evidence IEA]; Catalysis of the phosphorylation of a simple or complex lipid [goid 1727] [pmid 16286473] [evidence IDA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 16286473] [evidence IDA]; Catalysis of the reaction: NTP + 1,2-diacylglycerol = NDP + 1,2-diacylglycerol 3-phosphate [goid 4143] [pmid 9716136] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286473] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8626588] [evidence TAS]; Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 16286473] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	hDGKzeta; DAGK6; DAGK5; DGK-ZETA	hDGKzeta; DAGK6; DAGK5; DGK-ZETA
Homo sapiens	RefSeq	NR_001289.1	ILMN_3758	SNORD109B	NR_001289.1	NR_001289.1		338429	29171304	NR_001289.1	SNORD109B		ILMN_1787980	0002140484	S	18	AATTGTCTGAGGATGCTGAGGGACTCATTCCAGATGTCAATCTGAGGTCC	15	+	23074600-23074649	15q11.2e	Homo sapiens small nucleolar RNA, C/D box 109B (SNORD109B), small nucleolar RNA.				HBII-438B	HBII-438B
Homo sapiens	Unigene	Hs.552357	ILMN_110958	HS.552357	Hs.552357		Hs.552357		3016744	AA889865			ILMN_1914340	0006480102	S	224	CCTTGACCACATTTATCTCGGGGGGCCAAGTGATTTTCTTCCCAGCCAGC	12	+	58083277-58083326		al52b11.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1460925 3, mRNA sequence					
Homo sapiens	RefSeq	NM_012418.1	ILMN_10823	FSCN2	NM_012418.1	NM_012418.1		25794	6912625	NM_012418.1	FSCN2	NP_036550.1	ILMN_1713247	0003400066	S	1600	GCTTTGGGAGTACTGAGGCCGCGCCCAGACCAGCCTGTCGCGCATTAAAA				17q25.3f	Homo sapiens fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) (FSCN2), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10783262] [evidence TAS]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 10783262] [evidence TAS]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 10783262] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The assembly of actin filament bundles; actin filaments are on the same axis but may be oriented with the same or opposite polarities and may be packed with different levels of tightness [goid 51017] [pmid 10783262] [evidence TAS]	Interacting selectively with two or more protein molecules, or a protein and another macromolecule or complex, simultaneously, thereby physically linking the bound proteins or complexes to each other [goid 30674] [evidence IEA]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [evidence IEA]	RFSN; RP30	RFSN; RP30
Homo sapiens	RefSeq	NM_138783.1	ILMN_4250	ZNF653	NM_138783.2	NM_138783.2		115950	141801692	NM_138783.2	ZNF653	NP_620138.1	ILMN_1696276	0006100196	S	2072	CATCCTTCTCGGAGCTGGTGCCTGGGGCTGCATTGCTGGAACTGTGTCAA	19	-	11594276-11594325	19p13.2b-p13.2a	Homo sapiens zinc finger protein 653 (ZNF653), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZIP67; E430039K05Rik	ZIP67; E430039K05Rik
Homo sapiens	RefSeq	XR_042342.1	ILMN_336062	LOC642469	XR_042342.1	XR_042342.1		642469	169161091	XR_042342.1	LOC642469		ILMN_3276971	0003440164	M	2329	ACGCGGGGCAACCCCCTGCGGTGCACAGGCCCCCTGTCTGGAGTAGGGAT	1	-	76163-76212		PREDICTED: Homo sapiens misc_RNA (LOC642469), miscRNA.					
Homo sapiens	RefSeq	XR_042342.1	ILMN_336062	LOC642469	XR_042342.1	XR_042342.1		642469	169161091	XR_042342.1	LOC642469		ILMN_3200492	0006510202	A	2806	GCTGCTTATTTTAAACACTAAAAAGCGTTTAATTTTATGGGACAGATGTG					PREDICTED: Homo sapiens misc_RNA (LOC642469), miscRNA.					
Homo sapiens	RefSeq	XM_936381.1	ILMN_42828	LOC642228	XM_936381.1	XM_936381.1		642228	89035030	XM_936381.1	LOC642228	XP_941474.1	ILMN_1657715	0005080114	S	824	CAGTCGGTACAACGGGTGATTCATACGATAATGCTCTGGCTGAAACGGTG					PREDICTED: Homo sapiens hypothetical protein LOC642228 (LOC642228), mRNA.					
Homo sapiens	RefSeq	NM_178558.2	ILMN_26512	ZNF680	NM_178558.3	NM_178558.3		340252	142368040	NM_178558.3	ZNF680	NP_848653.1	ILMN_1730888	0001090280	S	2797	GGAGAGGCCCTGTTAGTTTACTTTTCATATTGAGTGATGCATGAGGTAGG	7	-	63617876-63617925	7q11.21c	Homo sapiens zinc finger protein 680 (ZNF680), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	FLJ90430	FLJ90430
Homo sapiens	RefSeq	NM_001098.2	ILMN_23057	ACO2	NM_001098.2	NM_001098.2		50	46411160	NM_001098.2	ACO2	NP_001089.1	ILMN_1654861	0003930639	S	2083	CACCAAGAGCTTTGCCAGGATCCACGAGACCAACCTGAAGAAACAGGGCC	22	+	40253345-40253370:40253851-40253874	22q13.2a	Homo sapiens aconitase 2, mitochondrial (ACO2), nuclear gene encoding mitochondrial protein, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9630632] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 1946331] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 9630632] [evidence TAS]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [pmid 9630632] [evidence IDA]; The chemical reactions and pathways involving citrate, 2-hydroxy-1,2,3-propanetricarboyxlate. Citrate is widely distributed in nature and is an important intermediate in the TCA cycle and the glyoxylate cycle [goid 6101] [pmid 9630632] [evidence IDA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: citrate = cis-aconitate + H2O = isocitrate; i.e. the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate [goid 3994] [evidence IEA]; Catalysis of the reaction: citrate = cis-aconitate + H2O = isocitrate; i.e. the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate [goid 3994] [pmid 1946331] [evidence EXP]; Interacting selectively with iron (Fe) ions [goid 5506] [pmid 9630632] [evidence IDA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]; Catalysis of the reaction: citrate = cis-aconitate + H2O = isocitrate; i.e. the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate [goid 3994] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	MGC20605; ACONM; MGC33908	MGC20605; ACONM; MGC33908
Homo sapiens	RefSeq	NM_153710.3	ILMN_26374	C9ORF96	NM_153710.3	NM_153710.3		169436	76563907	NM_153710.3	C9orf96	NP_714921.3	ILMN_1745713	0001570301	S	2669	AGACCTCGCCCCTGGACAGAGCAGTCCTTCCAGACCATTCTAGATGAGAG	9	+	135260931-135260980	9q34.2a	Homo sapiens chromosome 9 open reading frame 96 (C9orf96), mRNA.				MGC43306; RP11-244N20.8	MGC43306; RP11-244N20.8
Homo sapiens	RefSeq	NM_153236.3	ILMN_2211	GIMAP7	NM_153236.3	NM_153236.3		168537	55774985	NM_153236.3	GIMAP7	NP_694968.1	ILMN_2133316	0003420687	S	750	AGGACACAGAGGAAAGGCTGAAACAACGGGAAGAGGTTTTGAGGAAAATC	7	+	149848615-149848664	7q36.1c	Homo sapiens GTPase, IMAP family member 7 (GIMAP7), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC27027; hIAN7; IAN7	MGC27027; hIAN7; IAN7
Homo sapiens	RefSeq	NM_153236.3	ILMN_2211	GIMAP7	NM_153236.3	NM_153236.3		168537	55774985	NM_153236.3	GIMAP7	NP_694968.1	ILMN_1776678	0003170091	S	578	GATGTGGGCCTAAAAAGCATCGTCAAGGAGTGCGGGAACCGCTGCTGTGC	7	+	149848443-149848492	7q36.1c	Homo sapiens GTPase, IMAP family member 7 (GIMAP7), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	MGC27027; hIAN7; IAN7	MGC27027; hIAN7; IAN7
Homo sapiens	RefSeq	XR_037908.1	ILMN_350896	LOC729858	XR_037908.1	XR_037908.1		729858	169212396	XR_037908.1	LOC729858		ILMN_3305751	0001070619	M	450	CCCAAGAGGCTTCCTTCAGCGTTCTTCCTGTTGTATTCTGAGTATCGCCC				17q12b	PREDICTED: Homo sapiens misc_RNA (LOC729858), miscRNA.					
Homo sapiens	RefSeq	XR_015412.2	ILMN_163147	LOC728933	XR_015412.2	XR_015412.2		728933	169184719	XR_015412.2	LOC728933		ILMN_3243807	0003310286	S	717	AATCTTATTTAACTAAGTTTTATCCAAATCATGTTAACTTAAGAAACATT	10	+	135366272-135366321	10q26.3f	PREDICTED: Homo sapiens misc_RNA (LOC728933), miscRNA.					
Homo sapiens	RefSeq	NM_033397.2	ILMN_178040	ITPRIP	NM_033397.2	NM_033397.2		85450	47271452	NM_033397.2	ITPRIP	NP_203755.1	ILMN_1805192	0002690324	S	4131	GCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCTCCTTTGC	10	-	106072522-106072571	10q25.1a	Homo sapiens inositol 1,4,5-triphosphate receptor interacting protein (ITPRIP), mRNA.				bA127L20.2; RP11-127L20.4; DANGER; bA127L20	bA127L20.2; RP11-127L20.4; DANGER; bA127L20
Homo sapiens	RefSeq	NM_033397.2	ILMN_178040	ITPRIP	NM_033397.2	NM_033397.2		85450	47271452	NM_033397.2	ITPRIP	NP_203755.1	ILMN_3239181	0002970347	S	4215	TCTGGCTTCTTGTGTGTACAGAGACAACAGAACTCGGTGGGGAAACGGGA	10	-	106072438-106072487	10q25.1a	Homo sapiens inositol 1,4,5-triphosphate receptor interacting protein (ITPRIP), mRNA.				bA127L20.2; RP11-127L20.4; DANGER; bA127L20	bA127L20.2; RP11-127L20.4; DANGER; bA127L20
Homo sapiens	RefSeq	XM_929822.1	ILMN_38121	LOC646864	XM_929822.2	XM_929822.2		646864	113428170	XM_929822.2	LOC646864	XP_934915.2	ILMN_1692164	0002140494	S	961	CTGGGTGTTGGTGTCTCTAAGCCAGATTTAATCACCTGTCTGGAGCAAGG	19	+	22823026-22823029:22823840-22823885	19p12c	PREDICTED: Homo sapiens similar to zinc finger protein 430 (LOC646864), mRNA.					
Homo sapiens	RefSeq	NM_173699.1	ILMN_182504	MAGEB18	NM_173699.2	NM_173699.2		286514	141801944	NM_173699.2	MAGEB18	NP_775970.1	ILMN_1718448	0007610630	S	1314	CAACATTCTAAGTAGTGAATGGCCAGAGTGCGTCTGGAGGGAACACGGCA	X	+	26068276-26068325	Xp21.3c	Homo sapiens melanoma antigen family B, 18 (MAGEB18), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	MGC33889	MGC33889
Homo sapiens	RefSeq	NM_001007546.1	ILMN_7374	FLJ46838	NM_001007546.2	NM_001007546.2		440865	142347180	NM_001007546.2	FLJ46838	NP_001007547.1	ILMN_1770385	0004830347	S	1959	TCAGAACCAGAGCAGCCGGGAGCAGCCTGAGCTGGGGTTTTCTTCCACAT	2	+	48612276-48612325	2p16.3d	Homo sapiens FLJ46838 protein (FLJ46838), mRNA.					
Homo sapiens	RefSeq	NM_004233.2	ILMN_166338	CD83	NM_001040280.1	NM_001040280.1		9308	94421023	NM_001040280.1	CD83	NP_001035370.1	ILMN_1780582	0005050162	S	1909	GCCTTCTGTAGGAATTCTTTTGGGGAAGTGAGGAAGCCAGGTCCACGGTC	6	+	14136583-14136632	6p23b	Homo sapiens CD83 molecule (CD83), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9310491] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8422464] [evidence TAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 1378080] [evidence TAS]; An immune response mediated through a body fluid [goid 6959] [pmid 8422464] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9310491] [evidence TAS]		HB15; BL11	HB15; BL11
Homo sapiens	RefSeq	NM_013290.5	ILMN_370976	PSMC3IP	NM_013290.5	NM_013290.5		29893	219555656	NM_013290.5	PSMC3IP	NP_037422.2	ILMN_3307266	0000050382	A	487	GCAGGTGTACAGAGAGAGGCAGAAGTACTGTAAGGAGTGGAGGAAGAGGA	17	-	40725336-40725382:40725496-40725498	17q21.31a	Homo sapiens PSMC3 interacting protein (PSMC3IP), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction [goid 6310] [evidence IEA]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 7490091] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10806355] [evidence NAS]		
Homo sapiens	RefSeq	XM_927374.1	ILMN_34654	LOC644175	XM_927374.1	XM_927374.1		644175	89029454	XM_927374.1	LOC644175	XP_932467.1	ILMN_1808102	0000070095	S	298	AGCATGACCCTGTCTGCATGTCGCCTCTCCAGTGTGACCCTATCAAACTT	9	-	67260678-67260727		PREDICTED: Homo sapiens hypothetical protein LOC644175 (LOC644175), mRNA.					
Homo sapiens	RefSeq	NM_001013739.1	ILMN_5961	STAG3L2	NM_001025202.2	NM_001025202.2		442582	148226756	NM_001025202.2	STAG3L2	NP_001020373.2	ILMN_1791375	0003710711	S	918	TCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGGTGACATACACAGAG	7	-	74299439-74299488	7q11.23c	Homo sapiens stromal antigen 3-like 2 (STAG3L2), mRNA.				MGC131759	
Homo sapiens	RefSeq	NM_080659.1	ILMN_9277	C11ORF52	NM_080659.1	NM_080659.1		91894	18087826	NM_080659.1	C11orf52	NP_542390.1	ILMN_2050790	0003610338	S	687	GTGCAGGGAGGTAGGTCTTCGACCCCACCATTGTTGCTCCTGCTCTTGCA	11	+	111302388-111302437	11q23.1b	Homo sapiens chromosome 11 open reading frame 52 (C11orf52), mRNA.				FLJ25219; MGC131888; MGC14839	FLJ25219; MGC131888; MGC14839
Homo sapiens	RefSeq	XM_498974.2	ILMN_31799	LOC441031	XM_498974.2	XM_498974.2		441031	88976578	XM_498974.2	LOC441031	XP_498974.2	ILMN_1768298	0004070041	A	26	AGCTCATCTGGTTGTTTGCAGCTAGTCACAAGGTGGCCCATTGTCCTGCC	4	+	97450937-97450968:97591666-97591683		PREDICTED: Homo sapiens hypothetical LOC441031 (LOC441031), mRNA.					
Homo sapiens	RefSeq	XM_001726173.1	ILMN_345047	LOC100131519	XM_001726173.1	XM_001726173.1		100131519	169214053	XM_001726173.1	LOC100131519	XP_001726225.1	ILMN_3287324	0005420082	M	166	ATGGCCAATGGGACCTTGATGGCCGAGGGCCAGGAATCAGTGACCTTCAA				19q13.33c	PREDICTED: Homo sapiens similar to hCG1651476 (LOC100131519), mRNA.					
Homo sapiens	RefSeq	XM_933700.1	ILMN_36159	LOC646562	XM_933700.1	XM_933700.1		646562	88942873	XM_933700.1	LOC646562	XP_938793.1	ILMN_1665970	0003400280	S	1	GTTTCTCTTTCTCTCTCCCTCTCTTGCGCTGTCCCTCATTCATGCACTCT	1	+	81544435-81544484		PREDICTED: Homo sapiens hypothetical protein LOC646562 (LOC646562), mRNA.					
Homo sapiens	RefSeq	NM_018398.2	ILMN_181267	CACNA2D3	NM_018398.2	NM_018398.2		55799	54112396	NM_018398.2	CACNA2D3	NP_060868.2	ILMN_1754076	0004220592	S	3562	CACCCTTCATCAGAAATGGGACCGCAAGTGGTAGGCAGTGTCCCTTCTGC	3	+	54888474-54888478:54889863-54889907	3p21.1a-p14.3d	Homo sapiens calcium channel, voltage-dependent, alpha 2/delta subunit 3 (CACNA2D3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	HSA272268	HSA272268
Homo sapiens	RefSeq	NM_005872.2	ILMN_11203	BCAS2	NM_005872.2	NM_005872.2		10286	49472833	NM_005872.2	BCAS2	NP_005863.1	ILMN_1751760	0002680358	S	682	AGCAGCAACATGGAGAGGCAAACAAAGAAAACATCCGGCAAGACTTCTGA	1	-	115110750-115110750:115110751-115110799	1p13.2a	Homo sapiens breast carcinoma amplified sequence 2 (BCAS2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 12169396] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9731529] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9731529] [evidence TAS]	DAM1	DAM1
Homo sapiens	RefSeq	NM_005872.2	ILMN_11203	BCAS2	NM_005872.2	NM_005872.2		10286	49472833	NM_005872.2	BCAS2	NP_005863.1	ILMN_2148452	0007610575	S	826	CCATTGATGTTTAAGTGTTTAGAAATCATAGAAGGTGTAGGCTGCTGTGG	1	-	115110606-115110655	1p13.2a	Homo sapiens breast carcinoma amplified sequence 2 (BCAS2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 12169396] [evidence IDA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9731529] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9731529] [evidence TAS]	DAM1	DAM1
Homo sapiens	Unigene	Hs.135587	ILMN_77680	HS.135587	Hs.135587		Hs.135587		1710285	U79300			ILMN_1876912	0003390091	S	774	CAGCAGGGGGACCAACTAGTAGGGAGTACATTTCATCGGTTGGAGAGAGG	4	+	138743403-138743452		Human clone 23629 mRNA sequence					
Homo sapiens	RefSeq	XM_933648.1	ILMN_42944	LOC644241	XM_933648.1	XM_933648.1		644241	88997711	XM_933648.1	LOC644241	XP_938741.1	ILMN_1719172	0001710064	A	121	CCCCACCTCCGCCGGGCTGGCGGCCACTGCGGTACCCTACGCCCCGTCGG	6	-	138230793-138230842		PREDICTED: Homo sapiens hypothetical protein LOC644240, transcript variant 1 (LOC644241), mRNA.					
Homo sapiens	RefSeq	NR_002211.1	ILMN_12070	MEIS3P1	NR_002211.1	NR_002211.1		4213	62632708	NR_002211.1	MEIS3P1		ILMN_2205896	0004610280	S	2530	GAAGCCTGTATAAAACATGGTACAGTGAGTGAATGCCCCCATCCCCAAGA	17	+	15633418-15633467	17p12a	Homo sapiens Meis homeobox 3 pseudogene 1 (MEIS3P1), non-coding RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MEIS3; MRG2; MEIS4	MEIS3; MRG2; MEIS4
Homo sapiens	RefSeq	XM_942294.1	ILMN_31354	LOC654254	XM_942294.1	XM_942294.1		654254	89076985	XM_942294.1	LOC654254	XP_947387.1	ILMN_1734939	0002320612	S	4	TGTTTTCAGGAACTCGTAACATTCAGGGATGTGGCCATAGAATTCTCCCC				4p16.3d	PREDICTED: Homo sapiens similar to zinc finger protein 595 (LOC654254), mRNA.					
Homo sapiens	RefSeq	NM_001003399.1	ILMN_9402	DKFZP451A211	NM_001003399.1	NM_001003399.1		400169	50979287	NM_001003399.1	DKFZp451A211	NP_001003399.1	ILMN_1776842	0004060091	S	5214	CACACTTCAGATACGACCATCACGGCCACATGGCTAAGGCCCACACCCTC	13	-	113103674-113103723	13q34d	Homo sapiens DKFZp451A211 protein (DKFZp451A211), mRNA.					
Homo sapiens	RefSeq	XM_498405.2	ILMN_39011	LOC442474	XM_498405.2	XM_498405.2		442474	89060507	XM_498405.2	LOC442474	XP_498405.1	ILMN_1731957	0006330148	S	189	CCCAGCCCCCTTTCCCTGCCGCTTCTATGCCTTTGGTGGCTTCAATTACG	X	-	532946-532995		PREDICTED: Homo sapiens similar to implantation-associated protein (LOC442474), mRNA.					
Homo sapiens	RefSeq	NM_024046.2	ILMN_24127	CAMKV	NM_024046.3	NM_024046.3		79012	83776595	NM_024046.3	CAMKV	NP_076951.2	ILMN_1667381	0005310343	S	2933	TCCCTGCATGCCTGTGGGTCTGCTCTGGTGTGTGAAGGTCGGTGGGTTAA	3	-	49895467-49895516	3p21.31c	Homo sapiens CaM kinase-like vesicle-associated (CAMKV), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	VACAMKL; MGC8407; 1G5	VACAMKL; MGC8407; 1G5
Homo sapiens	RefSeq	XM_001714966.1	ILMN_335023	LOC100131009	XM_001714966.1	XM_001714966.1		100131009	169164531	XM_001714966.1	LOC100131009	XP_001715018.1	ILMN_3275595	0000010554	M	843	CCACTTCCGTCACCTTCGTAGCCGCTGCGCGGAGCCTCCCGGCTTTGTTT				2q37.1c	PREDICTED: Homo sapiens hypothetical protein LOC100131009 (LOC100131009), mRNA.					
Homo sapiens	Unigene	Hs.544261	ILMN_107709	HS.544261	Hs.544261		Hs.544261		3769884	AI207942			ILMN_1849124	0000010471	S	141	GAATGAACGTTGAACACAGGATGTGGAAGGGGCGCAAAGTTAGTGTCTAC	5	+	8226923-8226958:8226960-8226973		ap14f06.x1 Schiller oligodendroglioma Homo sapiens cDNA clone IMAGE:1955363 3, mRNA sequence					
Homo sapiens	RefSeq	Hs.225661	ILMN_162999	FLJ36644	XM_001131577.1	XM_001131577.1		400617	113427558	XM_001131577.1	FLJ36644	XP_001131577.1	ILMN_1910334	0001850025	S	2491	CCCCCAACATTCTCTCCTCCCAAAGACTGAAGGATGTGCAGCAAAGCTTA				17q24.3a	PREDICTED: Homo sapiens hypothetical gene supported by AK093963 (FLJ36644), mRNA.					
Homo sapiens	Unigene	Hs.542713	ILMN_106464	HS.542713	Hs.542713		Hs.542713		3765795	AI207123			ILMN_1887410	0007320086	S	78	ATGAGATTTCCCTGCGGGATGCGGGGCAAGGACTGCACTTCTCCATGCAC	22	-	35502623-35502672		qf59f01.x1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1754329 3, mRNA sequence					
Homo sapiens	RefSeq	NM_024052.4	ILMN_28211	C17ORF39	NM_024052.4	NM_024052.4		79018	47078274	NM_024052.4	C17orf39	NP_076957.3	ILMN_1656427	0000780070	S	3683	GCTTCCATTCTGCTGTCCTCAGCCTCGACCCTCTTCTGTGCTGGACTTCC	17	+	17911894-17911943	17p11.2g	Homo sapiens chromosome 17 open reading frame 39 (C17orf39), mRNA.				MGC3048	MGC3048
Homo sapiens	RefSeq	NM_001802.1	ILMN_10283	CDR2	NM_001802.1	NM_001802.1		1039	55770831	NM_001802.1	CDR2	NP_001793.1	ILMN_1720270	0002140228	S	2480	GCTGACTTGCCAGCCACAAGCTGCTCTTGCAGAGTTCTTACCATTCCTGT	16	-	22357429-22357478	16p12.1c	Homo sapiens cerebellar degeneration-related protein 2, 62kDa (CDR2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11988016] [evidence IPI]	CDR62; Yo	CDR62; Yo
Homo sapiens	RefSeq	XM_944125.1	ILMN_137710	NFATC2IP	XM_944125.1	XM_944125.1		84901	89040767	XM_944125.1	NFATC2IP	XP_949218.1	ILMN_1802331	0006380136	I	712	CATGTGGGGAATGAATCGCTTGGGGAAAAGAGGTGGCTTACCCCGGAGGG				16p11.2e	PREDICTED: Homo sapiens nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein, transcript variant 3 (NFATC2IP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels [goid 1816] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NR_001442.2	ILMN_10223	FER1L4	NR_001442.2	NR_001442.2		80307	62899071	NR_001442.2	FER1L4		ILMN_2206722	0004640039	S	3849	GGTCATCTTCCGTCCCCTCCACAAGTGACTCTCGCTGACCTTGGACACTC	20	-	33610027-33610076	20q11.22b	Homo sapiens fer-1-like 4 (C. elegans) (FER1L4) on chromosome 20.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			dJ309K20.1; FLJ22613; bA563A22B.1; C20orf124; FLJ13459	dJ309K20.1; FLJ22613; bA563A22B.1; C20orf124; FLJ13459
Homo sapiens	Unigene	Hs.551832	ILMN_110731	HS.551832	Hs.551832		Hs.551832		13574392	BG566739			ILMN_1896163	0000380445	S	204	GGTGGGCTCAAGTTTATGACTCAGCCTGGACCTAGCTTGGCTTCTCAGCT	1	-	16878310-16878359		602585614F1 NIH_MGC_76 Homo sapiens cDNA clone IMAGE:4714515 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001720625.1	ILMN_344065	LOC728782	XM_001720625.1	XM_001720625.1		728782	169217119	XM_001720625.1	LOC728782	XP_001720677.1	ILMN_3225634	0001260593	A	412	GTACCTGTGTTCAACTAAAGTGCCAGCCTGCTCCACCCAGAGAAGCACAC				Xq13.3a	PREDICTED: Homo sapiens similar to ribosomal protein L21 (LOC728782), mRNA.					
Homo sapiens	RefSeq	XM_001128836.2	ILMN_177314	LOC728934	XM_001128836.2	XM_001128836.2		728934	169211109	XM_001128836.2	LOC728934	XP_001128836.1	ILMN_3248758	0004150148	S	298	CCCCTCGTCGTGCACGGCTGTGGTGTGCAGGCCCTGCTGCTGGGCCACCA	17	+	68823-68872		PREDICTED: Homo sapiens hypothetical LOC728934 (LOC728934), mRNA.					
Homo sapiens	RefSeq	NM_003326.2	ILMN_8432	TNFSF4	NM_003326.2	NM_003326.2		7292	23510446	NM_003326.2	TNFSF4	NP_003317.1	ILMN_2089875	0005690398	S	3209	CTGGACAAGCTTACATCTTCCTCAGCCATCTTTGTGAGTCCTTCAAGAGC	1	-	171419727-171419776	1q25.1a	Homo sapiens tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kDa) (TNFSF4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7913952] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7913952] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 7913952] [evidence TAS]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	TXGP1; OX4OL; CD252; CD134L; OX-40L; GP34	TXGP1; OX4OL; CD252; CD134L; OX-40L; GP34
Homo sapiens	RefSeq	NM_003326.2	ILMN_8432	TNFSF4	NM_003326.2	NM_003326.2		7292	23510446	NM_003326.2	TNFSF4	NP_003317.1	ILMN_1746175	0002710349	S	2793	GGCCTCTGCAACCACACAGGGATATTTCTGCTATGCACCAGCCTCACTCC	1	-	171420143-171420192	1q25.1a	Homo sapiens tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kDa) (TNFSF4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7913952] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7913952] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 7913952] [evidence TAS]	Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]	TXGP1; OX4OL; CD252; CD134L; OX-40L; GP34	TXGP1; OX4OL; CD252; CD134L; OX-40L; GP34
Homo sapiens	RefSeq	NM_004398.2	ILMN_20779	DDX10	NM_004398.2	NM_004398.2		1662	13514830	NM_004398.2	DDX10	NP_004389.2	ILMN_1753249	0003930553	S	2882	CTCAGATCGAGGGTGGATGATACCATTTCCTGACCCCGTTTTCCAGCATG	11	+	108316549-108316598	11q22.3c-q22.3d	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 (DDX10), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a RNA helix [goid 3724] [pmid 8660968] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HRH-J8	HRH-J8
Homo sapiens	RefSeq	XM_001714196.1	ILMN_340745	LOC100129152	XM_001714196.1	XM_001714196.1		100129152	169217062	XM_001714196.1	LOC100129152	XP_001714248.1	ILMN_3183318	0002100195	A	574	GGCAGCCTGAGTCCCTAAGCCTGGAAGGCTAAAGTACCCTCGGGCGCCCC				Xp11.22c	PREDICTED: Homo sapiens similar to CG41582-PA (LOC100129152), mRNA.					
Homo sapiens	RefSeq	NM_004676.2	ILMN_16886	PRY2	NM_001002758.1	NM_001002758.1		442862	50959166	NM_001002758.1	PRY2	NP_001002758.1	ILMN_1666140	0004040561	S	136	CCCAACCTTCTTTCACTGACACCCACCTCTAAGGACTCAGAGAGACATGA	Y	-	24231028-24231038:24241879-24241917	Yq11.223b	Homo sapiens PTPN13-like, Y-linked 2 (PRY2), mRNA.				PTPN13LY; PRY; PTPN13LY2	PRY1; PTPN13LY
Homo sapiens	Unigene	Hs.122053	ILMN_75819	HS.122053	Hs.122053		Hs.122053		2838005	AA778674			ILMN_1845076	0007330768	S	248	TCCTCCTGGCTAGTAGATGCTGATGGCCCTGGGTGACCATCCAAGTGGCT	4	+	4975024-4975073		af87f08.s1 Soares_testis_NHT Homo sapiens cDNA clone 1049031 3, mRNA sequence					
Homo sapiens	RefSeq	NM_017955.2	ILMN_5465	CDCA4	NM_017955.2	NM_017955.2		55038	22027508	NM_017955.2	CDCA4	NP_060425.2	ILMN_1753183	0007610494	I	1151	TCTTTGTGTCCCCCACTGTAGAGGACGGTGAGCCGCAGCTGCATCAACCT	14	-	104548275-104548324	14q32.33c	Homo sapiens cell division cycle associated 4 (CDCA4), transcript variant 13, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MGC19517; FLJ20764; HEPP	MGC19517; FLJ20764; HEPP
Homo sapiens	RefSeq	NR_030363.1	ILMN_388137	MIR633	NR_030363.1	NR_030363.1		693218	262206154	NR_030363.1	MIR633		ILMN_3310925	0005550669	S	11	GCCTCTGTTTCTTTATTGCGGTAGATACTATTAACCTAAAATGAGAAGGC				17q23.2d	Homo sapiens microRNA 633 (MIR633), microRNA.					
Homo sapiens	Unigene	Hs.122125	ILMN_75831	HS.122125	Hs.122125		Hs.122125		5054173	AI733060			ILMN_1823732	0003460528	S	159	GCTGTCTTCCAGGGGTCCCAAATTGGATGGGTGTTTCCAGTGGCATGCTC	15	+	51593389-51593438		ok82d09.x5 NCI_CGAP_Kid3 Homo sapiens cDNA clone IMAGE:1520465 3, mRNA sequence					
Homo sapiens	RefSeq	NM_018155.1	ILMN_3338	SLC25A36	NM_018155.1	NM_018155.1		55186	8922550	NM_018155.1	SLC25A36	NP_060625.1	ILMN_1766528	0003870242	S	1843	TTCACTGACTGCGGCATGTCCTCGTGTCTTCTCTGATTTTGTGGTACATG	3	+	142178686-142178735	3q23b	Homo sapiens solute carrier family 25, member 36 (SLC25A36), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; Transport of substances into, out of or within a mitochondrion [goid 6839] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen [goid 32355] [pmid 15831516] [evidence IDA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ10618	FLJ10618
Homo sapiens	RefSeq	NM_032559.3	ILMN_13389	KIF2B	NM_032559.3	NM_032559.3		84643	49355830	NM_032559.3	KIF2B	NP_115948.3	ILMN_2135537	0006400202	S	2131	CCACGTGAAGAGCAAGGTAGAGTGAAGCCAATGGCGAGAGATCAGGTCCG	17	+	49257391-49257415:49257416-49257440	17q22a	Homo sapiens kinesin family member 2B (KIF2B), mRNA.	A multisubunit complex that is located at the centromeric region of a condensed chromosome and provides an attachment point for the spindle microtubules [goid 777] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart [goid 5819] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]		
Homo sapiens	RefSeq	XR_017947.2	ILMN_168459	FLJ14816	XR_017947.2	XR_017947.2		84931	169164629	XR_017947.2	FLJ14816		ILMN_3307201	0004590465	A	853	GCCCCAGGCAAGCCACTCACCCTCTCTGGGCCATCCATCAAACAAGAGAT				2q14.2d	PREDICTED: Homo sapiens misc_RNA (FLJ14816), miscRNA.					
Homo sapiens	RefSeq	XM_941117.1	ILMN_8998	LOC285697	XM_210642.1	XM_210642.1		285697	27479022	XM_210642.1	LOC285697	XP_210642.1	ILMN_1720238	0007210056	A	122	AAGGTGACAAAGAAACCTCAGCCTCAGCTCCTCCTGCAGCCAAAAGGCTG	5	+	17539508-17539557	5p15.1a	PREDICTED: Homo sapiens similar to Transcription initiation factor TFIID subunit 11 (Transcription initiation factor TFIID 28 kDa subunit) (TAF(II)28) (TAFII-28) (TAFII28) (TFIID subunit p30-beta) (LOC285697), mRNA.					
Homo sapiens	RefSeq	NM_003068.3	ILMN_165913	SNAI2	NM_003068.3	NM_003068.3		6591	24497625	NM_003068.3	SNAI2	NP_003059.1	ILMN_1655740	0000050255	S	929	CCTGCACAAACATGAGGAATCTGGCTGCTGTGTAGCACACTGAGTGACGC	8	-	49993911-49993918:49993919-49993960	8q11.21c	Homo sapiens snail homolog 2 (Drosophila) (SNAI2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10866665] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10866665] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A cell-cell signaling process occurring between the two gastrulation-generated layers of the ectoderm and the mesoderm [goid 7499] [pmid 9182671] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	WS2D; SLUG; SLUGH1; MGC10182	WS2D; SLUG; SLUGH1; MGC10182
Homo sapiens	RefSeq	NM_003068.3	ILMN_165913	SNAI2	NM_003068.3	NM_003068.3		6591	24497625	NM_003068.3	SNAI2	NP_003059.1	ILMN_2082585	0006330730	S	1369	AGGATTTCCCATAGGAAGAGATCTGCCAGACGCGAACTCAGGTGCCTTAA	8	-	49993471-49993520	8q11.21c	Homo sapiens snail homolog 2 (Drosophila) (SNAI2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10866665] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10866665] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; A cell-cell signaling process occurring between the two gastrulation-generated layers of the ectoderm and the mesoderm [goid 7499] [pmid 9182671] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation [goid 9314] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	WS2D; SLUG; SLUGH1; MGC10182	WS2D; SLUG; SLUGH1; MGC10182
Homo sapiens	RefSeq	XR_041422.1	ILMN_345692	LOC646576	XR_041422.1	XR_041422.1		646576	169166335	XR_041422.1	LOC646576		ILMN_3288032	0004200470	M	960	GCCCAGGCTCCATTCACCAAGCAGAGCTTATGTTGTTGTGTGTCTGTGTC	4	-	145783876-145783925	4q31.22a	PREDICTED: Homo sapiens hypothetical LOC646576 (LOC646576), miscRNA.					
Homo sapiens	RefSeq	NM_012365.1	ILMN_16010	OR2A5	NM_012365.1	NM_012365.1		393046	53850571	NM_012365.1	OR2A5	NP_036497.1	ILMN_1732024	0000360561	S	425	CAGTCCTGGCTGTCACTTCTTGGGCATGTGGTTCCCTTCTGGCCCTGGTC	7	+	143378852-143378901	7q35a	Homo sapiens olfactory receptor, family 2, subfamily A, member 5 (OR2A5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2A26; OR7-141; OR2A8; OR2A11P; OR7-138	OR2A26; OR7-138; OR7-141; OR2A8; OR2A11P
Homo sapiens	RefSeq	XM_944384.1	ILMN_43746	LOC650843	XM_944384.1	XM_944384.1		650843	89028788	XM_944384.1	LOC650843	XP_949477.1	ILMN_1760842	0006940170	S	505	CCTCCCAAAGTGCTGGGATTAGAGGCGTGAGCCACCATGACCGGCCTAAA					PREDICTED: Homo sapiens hypothetical protein LOC650843 (LOC650843), mRNA.					
Homo sapiens	RefSeq	XM_945836.1	ILMN_44066	LOC651137	XM_945836.1	XM_945836.1		651137	88999438	XM_945836.1	LOC651137	XP_950929.1	ILMN_1740855	0003520240	I	40	CAGACTGAGGGGGTCACAAGTTTGGGGCCGAGGACACTGGGGTATCCCCT					PREDICTED: Homo sapiens similar to T-complex protein 10A homolog, transcript variant 3 (LOC651137), mRNA.					
Homo sapiens	RefSeq	NM_003891.1	ILMN_29990	PROZ	NM_003891.1	NM_003891.1		8858	4506120	NM_003891.1	PROZ	NP_003882.1	ILMN_1664565	0006480746	S	1137	GAGGGCAGGCTCACATGGTCCTTGTCACCAAGGTCTCCAGGTACTCACTC	13	+	112874347-112874396	13q34c	Homo sapiens protein Z, vitamin K-dependent plasma glycoprotein (PROZ), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	PZ	PZ
Homo sapiens	RefSeq	NM_001002247.1	ILMN_5565	ANAPC11	NM_001002246.1	NM_001002246.1		51529	50409803	NM_001002246.1	ANAPC11	NP_001002246.1	ILMN_1722102	0004760288	A	421	AATGGAAGTTCAAGGAGTGAGGCCCGACCTGGCTCTCGCTGGAGGGGCAT	17	+	77451214-77451233:77451234-77451263	17q25.3g	Homo sapiens anaphase promoting complex subunit 11 (ANAPC11), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [pmid 11739784] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 11739784] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 11739784] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11739784] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSPC214; MGC882; Apc11p; APC11	Apc11p; HSPC214; MGC882; APC11
Homo sapiens	RefSeq	NM_001002246.1	ILMN_5565	ANAPC11	NM_001002246.1	NM_001002246.1		51529	50409803	NM_001002246.1	ANAPC11	NP_001002246.1	ILMN_2343563	0000010220	A	635	AGGCCTCTGGGTGCCTGTGTTCTCGGCATATAGATGTGGTCTCGGTGTGT	17	+	77451428-77451477	17q25.3g	Homo sapiens anaphase promoting complex subunit 11 (ANAPC11), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B [goid 5680] [pmid 11739784] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 11739784] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 11739784] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 11739784] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HSPC214; MGC882; Apc11p; APC11	Apc11p; HSPC214; MGC882; APC11
Homo sapiens	RefSeq	XM_946070.1	ILMN_309418	USP24	NM_015306.1	NM_015306.1		23358	149192844	NM_015306.1	USP24	NP_056121.1	ILMN_1684594	0000830634	A	9815	CTAGAGTGCCGTATCATCAGACTTACCCTGTCCTGCCCCACCTTCCCTGC	1	-	55304824-55304873	1p32.3a	Homo sapiens ubiquitin specific peptidase 24 (USP24), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	FLJ31309; KIAA1057	
Homo sapiens	RefSeq	NM_203339.1	ILMN_15532	CLU	NM_203339.1	NM_203339.1		1191	42740906	NM_203339.1	CLU	NP_976084.1	ILMN_1798298	0001070471	I	198	GTCTCCCACTAGGGATGCAGATGGATTCGGTGTGAAGGGCTGGCTGCTGT	8	-	27524608-27524657	8p21.1e	Homo sapiens clusterin (CLU), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 14718574] [evidence NAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 2387851] [evidence NAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17043677] [evidence IPI]	SP-40; MGC24903; CLI; APOJ; SGP-2; TRPM-2; AAG4; TRPM2; KUB1; SGP2	SP-40; MGC24903; CLI; APOJ; SGP-2; TRPM-2; AAG4; TRPM2; KUB1; SGP2
Homo sapiens	RefSeq	NM_031949.4	ILMN_25631	TTLL2	NM_031949.4	NM_031949.4		83887	99028882	NM_031949.4	TTLL2	NP_114155.4	ILMN_2201905	0007150719	S	1923	CTGTCCTAGAGAAAGCAATAGTTCAAGTCCCTACCTGTGCCACCAGCATG	6	+	167675213-167675262	6q27d	Homo sapiens tubulin tyrosine ligase-like family, member 2 (TTLL2), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	dJ366N23.3; C6orf104; NYD-TSPG	dJ366N23.3; C6orf104; NYD-TSPG
Homo sapiens	RefSeq	NM_005335.3	ILMN_10504	HCLS1	NM_005335.3	NM_005335.3		3059	37059786	NM_005335.3	HCLS1	NP_005326.1	ILMN_1727402	0001300408	S	1731	GTGTTCCTGACTCCTTCCCAATGAACACCTCTCTGCCACCCCAAGCTCTG	3	-	122833112-122833161	3q13.33c	Homo sapiens hematopoietic cell-specific Lyn substrate 1 (HCLS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; RNA polymerase II, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces mRNAs, snoRNAs, and some of the snRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The largest subunit of RNA polymerase II contains an essential carboxyl-terminal domain (CTD) composed of a variable number of heptapeptide repeats (YSPTSPS). The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerases I and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5665] [pmid 2587259] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 2587259] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 8978766] [evidence TAS]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus [goid 9725] [evidence ISS]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein [goid 42531] [evidence ISS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2587259] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	HS1; CTTNL	HS1; CTTNL
Homo sapiens	RefSeq	XM_936992.1	ILMN_162964	LOC731002	XR_015554.1	XR_015554.1		731002	113413913	XR_015554.1	LOC731002		ILMN_1716693	0002680431	S	380	ACAGGGAATGGTAGAGGGATTATCAACCTCAATGCCTTTGACCCCACACT					PREDICTED: Homo sapiens similar to fumarylacetoacetate hydrolase domain containing 2A (LOC731002), mRNA.					
Homo sapiens	RefSeq	NM_002726.3	ILMN_27814	PREP	NM_002726.3	NM_002726.3		5550	41349455	NM_002726.3	PREP	NP_002717.3	ILMN_1751887	0006940356	S	2386	CCCACGTTGACACCAAGAAACCACTGGGCATAATGCTTCCCCACGGGAAC	6	-	105832935-105832984	6q21b	Homo sapiens prolyl endopeptidase (PREP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9695945] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [pmid 9695945] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 9695945] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PEP; PE; MGC16060	PEP; PE; MGC16060
Homo sapiens	RefSeq	XM_926548.1	ILMN_34125	LOC653227	XM_926548.1	XM_926548.1		653227	89038065	XM_926548.1	LOC653227	XP_931641.1	ILMN_1787840	0000010148	S	949	CCCATGGACGAACACTCCTGCCCGCTGATTTTCTCCAGCTGTGAGTACCA	15	+	25156742-25156791		PREDICTED: Homo sapiens similar to Gamma-aminobutyric-acid receptor gamma-3 subunit precursor (GABA(A) receptor) (LOC653227), mRNA.					
Homo sapiens	RefSeq	NM_003696.2	ILMN_18668	OR6A2	NM_003696.2	NM_003696.2		8590	34330167	NM_003696.2	OR6A2	NP_003687.2	ILMN_1686244	0005270382	S	1085	CTGCCTGCGCAATCAAGAGGTCAAGAGAGCCCTATGCTGTACTCTGCACC	11	-	6816005-6816054	11p15.4b	Homo sapiens olfactory receptor, family 6, subfamily A, member 2 (OR6A2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9787077] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	I7; MGC126538; OR6A2P; OR11-55; OR6A1; MGC126540	I7; MGC126538; OR6A2P; OR11-55; OR6A1; MGC126540
Homo sapiens	RefSeq	XM_375646.3	ILMN_30738	ZNF525	XM_375646.3	XM_375646.3		170958	89056927	XM_375646.3	ZNF525	XP_375646.2	ILMN_1748432	0006860450	A	4792	AGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCC	19	+	58580880-58580929	19q13.41b	PREDICTED: Homo sapiens zinc finger protein 525 (ZNF525), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_929333.1	ILMN_36261	LOC646407	XM_929333.1	XM_929333.1		646407	89052428	XM_929333.1	LOC646407	XP_934426.1	ILMN_1655758	0002650731	S	159	GGATTCCACGGGTTCCCAGGACGCGGATTCCACGTGGCCGAACCCACTCC	19	-	13736085-13736134	19p13.13a	PREDICTED: Homo sapiens similar to mucosal vascular addressin cell adhesion molecule 1 isoform a precursor (LOC646407), mRNA.					
Homo sapiens	RefSeq	XM_937224.1	ILMN_36261	LOC646407	XM_929333.1	XM_929333.1		646407	89052428	XM_929333.1	LOC646407	XP_934426.1	ILMN_1711276	0002600168	S	134	CGGATTCCACGGGTTCCCAGGACGCGGATTCCACGGGTTCCCAGGACGCG	19	-	13736110-13736159	19p13.13a	PREDICTED: Homo sapiens similar to mucosal vascular addressin cell adhesion molecule 1 isoform a precursor (LOC646407), mRNA.					
Homo sapiens	RefSeq	NM_178504.3	ILMN_162259	DNHD2	XM_001134410.1	XM_001134410.1		201625	113414896	XM_001134410.1	DNHD2	XP_001134410.1	ILMN_1801341	0001710253	S	3215	CTCGATGGCGCACGCTGGGACCGAGAAAGTGGATTGCTTGCTGAACAATA				3p14.3b	PREDICTED: Homo sapiens dynein heavy chain domain 2 (DNHD2), mRNA.	Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity [goid 30286] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]	Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]		FLJ40427
Homo sapiens	RefSeq	NM_014657.1	ILMN_9132	KIAA0406	NM_014657.1	NM_014657.1		9675	24307960	NM_014657.1	KIAA0406	NP_055472.1	ILMN_1741398	0004810220	S	3551	CGGCCATAGGCGGTGGCAGCGGCAGCAGAGAAGGTGAATTAGTTAGCCAA	20	-	36611736-36611785	20q11.23c	Homo sapiens KIAA0406 (KIAA0406), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	NM_005497.3	ILMN_3556	GJC1	NM_005497.3	NM_005497.3		10052	122939170	NM_005497.3	GJC1	NP_005488.2	ILMN_2397484	0006370270	A	7112	TGAGATGACAATCTCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGAG	17	-	42876298-42876347	17q21.31c-q21.31d	Homo sapiens gap junction protein, gamma 1, 45kDa (GJC1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes [goid 1570] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7966354] [evidence NAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 7966354] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a junction between cells [goid 7043] [pmid 7966354] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]; The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure [goid 48738] [evidence IEA]		DKFZp686P0738; GJA7; CX45	DKFZp686P0738; CX45
Homo sapiens	RefSeq	NM_001025247.1	ILMN_6399	TAF5L	NM_001025247.1	NM_001025247.1		27097	69122930	NM_001025247.1	TAF5L	NP_001020418.1	ILMN_1797056	0000010279	I	3719	AGCACTGATGCAGGCTGCAACATGGATGAACTTGAAAGCTTTATGCTACG	1	-	229735311-229735360	1q42.13e	Homo sapiens TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa (TAF5L), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 9674425] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9674425] [evidence TAS]	PAF65B	PAF65B
Homo sapiens	RefSeq	NM_006627.1	ILMN_25452	POP4	NM_006627.1	NM_006627.1		10775	5729985	NM_006627.1	POP4	NP_006618.1	ILMN_1696383	0001410528	S	692	CTTTGCCGTCTAAGGCAGTTGTTTATGACAGCTGAAAACTGGACACTCCC	19	+	34798131-34798180	19q12c	Homo sapiens processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) (POP4), mRNA.	A ribonucleoprotein complex that cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication [goid 172] [evidence IEA]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [evidence IEA]; A ribonucleoprotein complex that catalyzes cleavage of the leader sequence of precursor tRNAs (pre-tRNAs), generating the mature 5' end of tRNAs [goid 30677] [evidence IEA]; A ribonucleoprotein complex that cleaves the rRNA precursor as part of rRNA transcript processing. It also has other roles: In S. cerevisiae it is involved in cell cycle-regulated degradation of daughter cell-specific mRNAs, while in mammalian cells it also enters the mitochondria and processes RNAs to create RNA primers for DNA replication [goid 172] [pmid 10352175] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonuclease P complex located in the nucleolus of a eukaryotic cell, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. Eukaryotic nucleolar ribonuclease P complexes generally contain a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules [goid 5655] [evidence IEA]; A ribonucleoprotein complex that catalyzes cleavage of the leader sequence of precursor tRNAs (pre-tRNAs), generating the mature 5' end of tRNAs [goid 30677] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [pmid 10352175] [evidence TAS]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [pmid 10352175] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10352175] [evidence TAS]; Catalysis of the endonucleolytic cleavage of RNA, removing 5' extra nucleotides from tRNA precursor [goid 4526] [pmid 10352175] [evidence TAS]; Catalysis of the hydrolysis of phosphodiester bonds in chains of RNA [goid 4540] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15096576] [evidence IPI]	RPP29	RPP29
Homo sapiens	RefSeq	XM_939911.1	ILMN_34403	LOC650822	XM_939911.1	XM_939911.1		650822	89037613	XM_939911.1	LOC650822	XP_945004.1	ILMN_1691833	0007100056	S	310	GCACAGTACTCCCTAGGCACCTGCAACCTGTATCCAAACATGCAGCTGGG					PREDICTED: Homo sapiens similar to T-cell receptor alpha chain V region CTL-L17 precursor (LOC650822), mRNA.					
Homo sapiens	RefSeq	XM_941628.1	ILMN_33952	LOC652234	XM_941628.1	XM_941628.1		652234	89069083	XM_941628.1	LOC652234	XP_946721.1	ILMN_1755172	0006290754	S	381	TGGGACCCTCAGCCCAGAAGGACGGATCAAGAAGGGACCTGAGTCACTGA					PREDICTED: Homo sapiens similar to stereocilin (LOC652234), mRNA.					
Homo sapiens	RefSeq	XR_015260.2	ILMN_166035	LOC728217	XR_015260.2	XR_015260.2		728217	169168011	XR_015260.2	LOC728217		ILMN_3275605	0003060360	M	226	ACTGCAGACCTATAACCCAGAGCAGCTTGGAGGTGGTGAATATCAGCTCC				5q22.2a	PREDICTED: Homo sapiens misc_RNA (LOC728217), miscRNA.					
Homo sapiens	RefSeq	XM_934471.1	ILMN_32988	LOC399942	XM_934471.1	XM_934471.1		399942	89034241	XM_934471.1	LOC399942	XP_939564.1	ILMN_1765701	0001740673	A	57	TTCGCCTCCTAATCCCTAGCCACTATGCGAGATGACTCCTTCAACACCTT	11	+	89655450-89655477:89655607-89655628	11q14.3b	PREDICTED: Homo sapiens similar to Tubulin alpha-2 chain (Alpha-tubulin 2), transcript variant 5 (LOC399942), mRNA.					
Homo sapiens	RefSeq	NR_031597.1	ILMN_388523	MIR1228	NR_031597.1	NR_031597.1		100302201	269847048	NR_031597.1	MIR1228		ILMN_3308663	0001400228	S	10	GCAGGTGTGTGGTGGGTGGTGGCCTGCGGTGAGCAGGGCCCTCACACCTG					Homo sapiens microRNA 1228 (MIR1228), microRNA.					
Homo sapiens	RefSeq	XM_001721819.1	ILMN_347771	LOC100128936	XM_001721819.1	XM_001721819.1		100128936	169165347	XM_001721819.1	LOC100128936	XP_001721871.1	ILMN_3267760	0003610053	M	130	CAGATTCCACGAATCCTCGGCCCAGGTCTAAATAAGGCAGGAAAGTTCCC				3p14.2b	PREDICTED: Homo sapiens similar to ribosomal protein L10a (LOC100128936), mRNA.					
Homo sapiens	Unigene	Hs.568093	ILMN_120274	HS.568093	Hs.568093		Hs.568093		51460923	XM_376160			ILMN_1855797	0006180373	S	1340	CAGGGAGCAAGCTGATGCTGAAACGAACAGTGCTCTGGAGGAGCTACGCC					PREDICTED: Homo sapiens similar to RIKEN cDNA 5330401P04 (LOC401026), mRNA					
Homo sapiens	Unigene	Hs.374278	ILMN_88389	HS.374278	Hs.374278		Hs.374278		21755028	AK095707			ILMN_1851492	0003460020	S	2660	GTATATTGTGGGGTTGGTCCCTTCTCACGAACCCAGGACCTGTGCTTGGG	16	+	79981590-79981639		Homo sapiens cDNA FLJ38388 fis, clone FEBRA2004485					
Homo sapiens	RefSeq	NM_173596.1	ILMN_14803	SLC39A5	NM_173596.1	NM_173596.1		283375	27734776	NM_173596.1	SLC39A5	NP_775867.1	ILMN_1794951	0004280647	S	1766	CCAACCACAGGAATGGAGGCGGGACACAGGGCCAGTAGGAGCAATAGGAT	12	+	54917823-54917872	12q13.2c	Homo sapiens solute carrier family 39 (metal ion transporter), member 5 (SLC39A5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	MGC34778; LZT-Hs7; ZIP5	MGC34778; LZT-Hs7; ZIP5
Homo sapiens	RefSeq	NM_015560.1	ILMN_10977	OPA1	NM_015560.1	NM_015560.1		4976	18860828	NM_015560.1	OPA1	NP_056375.1	ILMN_2322458	0001570403	A	5167	GCTAGGACTTCAATTTTAAAAATCAGTGTACCTAGGCAGTGCACAGCACG	3	+	194897312-194897361	3q29b	Homo sapiens optic atrophy 1 (autosomal dominant) (OPA1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 12504110] [evidence IDA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 11847212] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the inward folds of the mitochondrial inner membrane. Their number, extent, and shape differ in mitochondria from different tissues and organisms. They appear to be devices for increasing the surface area of the mitochondrial inner membrane, where the enzymes of electron transport and oxidative phosphorylation are found. Their shape can vary with the respiratory state of the mitochondria [goid 30061] [pmid 12504110] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 11847212] [evidence ISS]	The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments [goid 266] [pmid 12509422] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial inner membrane [goid 7007] [pmid 12509422] [evidence IDA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 11017080] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [pmid 12509422] [evidence TAS]; The directed movement of mitochondria along microtubules in nerve cell axons [goid 19896] [pmid 11017080] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [pmid 12509422] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 11017080] [evidence NAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 11017080] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	largeG; FLJ12460; MGM1; NTG; KIAA0567; NPG	FLJ12460; NTG; NPG; largeG; MGM1; KIAA0567
Homo sapiens	RefSeq	NM_130835.1	ILMN_10977	OPA1	NM_015560.1	NM_015560.1		4976	18860828	NM_015560.1	OPA1	NP_056375.1	ILMN_1729775	0001510682	A	5412	GGCAGAGAGTGGTGCTTCCCAGCCTCACAATGTGGGAATTTGACATAGGA	3	+	194897557-194897606	3q29b	Homo sapiens optic atrophy 1 (autosomal dominant) (OPA1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope [goid 5741] [pmid 12504110] [evidence IDA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [pmid 11847212] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the inward folds of the mitochondrial inner membrane. Their number, extent, and shape differ in mitochondria from different tissues and organisms. They appear to be devices for increasing the surface area of the mitochondrial inner membrane, where the enzymes of electron transport and oxidative phosphorylation are found. Their shape can vary with the respiratory state of the mitochondria [goid 30061] [pmid 12504110] [evidence IDA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [pmid 11847212] [evidence ISS]	The division of a mitochondrion within a cell to form two or more separate mitochondrial compartments [goid 266] [pmid 12509422] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the mitochondrial inner membrane [goid 7007] [pmid 12509422] [evidence IDA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 11017080] [evidence IMP]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; Merging of two or more mitochondria within a cell to form a single compartment [goid 8053] [pmid 12509422] [evidence TAS]; The directed movement of mitochondria along microtubules in nerve cell axons [goid 19896] [pmid 11017080] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [pmid 12509422] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [pmid 11017080] [evidence NAS]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 11017080] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	largeG; FLJ12460; MGM1; NTG; KIAA0567; NPG	FLJ12460; NTG; NPG; largeG; MGM1; KIAA0567
Homo sapiens	RefSeq	NM_001012642.1	ILMN_18426	GRAMD2	NM_001012642.1	NM_001012642.1		196996	60593094	NM_001012642.1	GRAMD2	NP_001012660.1	ILMN_1661443	0005720619	S	2867	CTGAGCCTTGCTTGGTTGTCAGAGGCCATGAGAGGTGCCAGTTATAGGTG	15	-	70239566-70239615	15q23b	Homo sapiens GRAM domain containing 2 (GRAMD2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_001119.3	ILMN_18025	ADD1	NM_001119.3	NM_001119.3		118	29826318	NM_001119.3	ADD1	NP_001110.2	ILMN_2356786	0001230289	A	3288	TGCCCTAGTTGTGATCAAAGGTAACTCGAGGTGGAGGGTAGCCCTGGGGC	4	+	2900005-2900048:2899911-2899916	4p16.3a	Homo sapiens adducin 1 (alpha) (ADD1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10823823] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]		Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 1840603] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADDA; MGC44427; MGC3339	ADDA; MGC44427; MGC3339
Homo sapiens	RefSeq	NM_172313.1	ILMN_21047	CSF3R	NM_172313.1	NM_172313.1		1441	27437044	NM_172313.1	CSF3R	NP_758519.1	ILMN_2371280	0006270114	A	2459	GACCAGATCATGCTCCATCCAGCCCCACCCAATGGCCTTTTGTGCTTGTT	1	-	36931718-36931767	1p34.3d	Homo sapiens colony stimulating factor 3 receptor (granulocyte) (CSF3R), transcript variant 4, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7542747] [evidence TAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 7542747] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1371413] [evidence NAS]; The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding [goid 30593] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7542747] [evidence TAS];  [goid 4896] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GCSFR; CD114	GCSFR; CD114
Homo sapiens	RefSeq	NM_014061.3	ILMN_8979	MAGEH1	NM_014061.3	NM_014061.3		28986	18105051	NM_014061.3	MAGEH1	NP_054780.2	ILMN_1659659	0002490168	S	951	TGGGGGTGTAAAAGAGAGTCACAGGTACCCCAAGGAGTAGATGCCAGGGT	X	+	55479488-55479537	Xp11.21a	Homo sapiens melanoma antigen family H, 1 (MAGEH1), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10948432] [evidence TAS]		APR-1; APR1	APR-1; APR1
Homo sapiens	RefSeq	NM_014061.3	ILMN_8979	MAGEH1	NM_014061.3	NM_014061.3		28986	18105051	NM_014061.3	MAGEH1	NP_054780.2	ILMN_2078226	0001980685	S	1014	TGATGTCGATTGGGGGCGGGGGACACTGTATTTGATATTTGTGATCAGTG	X	+	55479551-55479600	Xp11.21a	Homo sapiens melanoma antigen family H, 1 (MAGEH1), mRNA.		A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10948432] [evidence TAS]		APR-1; APR1	APR-1; APR1
Homo sapiens	RefSeq	NM_018319.3	ILMN_12296	TDP1	NM_018319.3	NM_018319.3		55775	57242803	NM_018319.3	TDP1	NP_060789.2	ILMN_1726520	0004070538	A	3602	AGGGCTGCAGGGCCTCCCACCTTCCAACAGACAGGCTCTGCTGTATCTGT	14	+	89580716-89580765	14q32.11a	Homo sapiens tyrosyl-DNA phosphodiesterase 1 (TDP1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10521354] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 10521354] [evidence NAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of covalent intermediates (in DNA backbone breakage) between DNA topoisomerase I and DNA [goid 17005] [pmid 10521354] [evidence NAS]; Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group [goid 8081] [evidence IEA]	FLJ11090; MGC104252	FLJ11090; MGC104252
Homo sapiens	RefSeq	NR_002573.1	ILMN_14784	U58	NR_002573.1	NR_002573.1		619491	77735354	NR_002573.1	U58		ILMN_3239331	0001170768	S	2	TGCTGTGATGACTATCTTAGGACACCTTTGGAATAACTATGAAAGAAAAC	18	-	47015627-47015676	18q21.1f	Homo sapiens U58 small nucleolar RNA (U58), small nucleolar RNA.					
Homo sapiens	RefSeq	XM_001131933.1	ILMN_170899	LOC729974	XM_001131933.1	XM_001131933.1		729974	113428354	XM_001131933.1	LOC729974	XP_001131933.1	ILMN_3234812	0004880543	S	278	GCTGAAATCTGTTCTAACAATGAACCCAAGGATGAGGAAGTTTCAAGTGG	19	+	60975222-60975268:60975780-60975782	19q13.42c	PREDICTED: Homo sapiens similar to Ret finger protein-like 4A (RING finger protein 210) (LOC729974), mRNA.					
Homo sapiens	Unigene	Hs.531817	ILMN_101708	HS.531817	Hs.531817		Hs.531817		15930010	BC015442			ILMN_1890587	0007160176	S	1739	CTGAGGGGAACAGAGACGAGGTAGGATGTGCCAGAGTAGTTATGTGGCTT	2	+	84778353-84778402		Homo sapiens similar to Dynein heavy chain at 16F, mRNA (cDNA clone MGC:22076 IMAGE:4424085), complete cds					
Homo sapiens	RefSeq	NM_016235.1	ILMN_23061	GPRC5B	NM_016235.1	NM_016235.1		51704	7706450	NM_016235.1	GPRC5B	NP_057319.1	ILMN_1786034	0003440445	S	2749	TGAAAAAGGTTAGTGTTTGGGGGCCGGGGGAGGACTGACCGCTTCATAAG	16	-	19870339-19870388	16p12.3a	Homo sapiens G protein-coupled receptor, family C, group 5, member B (GPRC5B), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Interacting selectively with the sevenless (sev) protein, a receptor tyrosine kinase [goid 5118] [evidence IEA]	RAIG2; RAIG-2	RAIG2; RAIG-2
Homo sapiens	RefSeq	XM_498392.2	ILMN_31346	LOC139363	XM_498392.2	XM_498392.2		139363	89060250	XM_498392.2	LOC139363	XP_498392.2	ILMN_1726435	0005670209	A	931	ATGGGTGGTACTACTCTCATGGCCAGTGCACATTCCTGGGCCAAGTCCAG	X	+	137393550-137393599	Xq26.3d	PREDICTED: Homo sapiens similar to melanoma antigen family A, 10 (LOC139363), mRNA.					
Homo sapiens	RefSeq	NM_014834.2	ILMN_8396	LRRC37A	NM_014834.3	NM_014834.3		9884	110665700	NM_014834.3	LRRC37A	NP_055649.3	ILMN_1783673	0003520672	S	3647	AACAGCCCCACACACAGCAGGGGCCTGAGAAGTTAGCGGGAAACGCCGTC	17	+	41764048-41764097	17q21.31e	Homo sapiens leucine rich repeat containing 37A (LRRC37A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	KIAA0563; DKFZp686N1231	KIAA0563; DKFZp686N1231
Homo sapiens	RefSeq	NM_181425.1	ILMN_164033	FXN	NM_181425.1	NM_181425.1		2395	31742515	NM_181425.1	FXN	NP_852090.1	ILMN_2342515	0000010132	A	1482	AGCACTTCTGAGCTCTTTAGCATTGAAGTGTCGAAAGCAACTCACACGGG	9	+	70877984-70878033	9q21.11a	Homo sapiens frataxin (FXN), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 9241270] [evidence TAS]	The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [evidence IEA]; The regulation of the levels, transport, and metabolism of iron ions within a cell or between a cell and its external environment [goid 6879] [pmid 9180083] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8841185] [evidence TAS]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 8841185] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [pmid 9180083] [evidence TAS]	Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [pmid 8841185] [evidence TAS]; Catalysis of the transfer of iron (Fe) ions from one side of a membrane to the other [goid 5381] [pmid 9326946] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 9326946] [evidence TAS]	FA; X25; FRDA; FARR; MGC57199; CyaY	FA; X25; FRDA; FARR; MGC57199; CyaY
Homo sapiens	RefSeq	XR_001331.1	ILMN_139332	LOC338799	XR_001331.1	XR_001331.1		338799	89036374	XR_001331.1	LOC338799		ILMN_1807704	0005390563	I	456	AGACACGAAGGAGAGGCCAACAGATGAGGGAAGCCATTTTTCTGCAATGG				12q24.31b	PREDICTED: Homo sapiens hypothetical locus LOC338799, transcript variant 1 (LOC338799), misc RNA.					
Homo sapiens	RefSeq	NM_173802.2	ILMN_25281	C12ORF72	NM_173802.2	NM_173802.2		254013	31341117	NM_173802.2	C12orf72	NP_776163.1	ILMN_1754410	0002340048	S	1629	AGTGCAGTGACTCATGTCTCGGCTCACTGTAGCCTCCACCTCCCCCAATC	12	+	31712742-31712791	12p11.21b	Homo sapiens chromosome 12 open reading frame 72 (C12orf72), mRNA.					
Homo sapiens	RefSeq	NM_019075.2	ILMN_17939	UGT1A10	NM_019075.2	NM_019075.2		54575	45827761	NM_019075.2	UGT1A10	NP_061948.1	ILMN_1740233	0001070088	S	602	CCTCTTTCCTATGTCCCCAATGATCTCTTAGGGTTCTCAGATGCCATGAC	2	+	234210463-234210512	2q37.1d	Homo sapiens UDP glucuronosyltransferase 1 family, polypeptide A10 (UGT1A10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence NAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: UDP-glucuronate + acceptor = UDP + acceptor beta-D-glucuronoside [goid 15020] [evidence IEA]; Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor) [goid 16758] [evidence IEA]	UDPGT; UGT1J	UDPGT; UGT1J
Homo sapiens	RefSeq	NM_000984.4	ILMN_9569	RPL23A	NM_000984.5	NM_000984.5		6147	78190460	NM_000984.5	RPL23A	NP_000975.2	ILMN_1788607	0004920408	S	730	GAACTCAGAACTTGCCTCCATGGTTGAGTAACAAGCTGTACAAGAACCCC	17	+	24075261-24075310	17q11.2a	Homo sapiens ribosomal protein L23a (RPL23A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 9417910] [evidence TAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 9417910] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ribosomal RNA [goid 19843] [evidence IEA]	MDA20; FLJ27455	MDA20; FLJ27455
Homo sapiens	RefSeq	XM_001714796.1	ILMN_353138	LOC392459	XM_001714796.1	XM_001714796.1		392459	169216938	XM_001714796.1	LOC392459	XP_001714848.1	ILMN_3296741	0003400068	M	1243	TCTATGATGAACCGGGTGGGGCTGCTGGCTCTGATGCTGCACGGGACGAT	X	+	47470183-47470232	Xp11.23f	PREDICTED: Homo sapiens similar to hCG29146 (LOC392459), mRNA.					
Homo sapiens	Unigene	Hs.543844	ILMN_107361	HS.543844	Hs.543844		Hs.543844		2993916	AA884386			ILMN_1906948	0006380538	S	255	GCTGCCTCACCAAGTCAAACCAGTCAGGCCCCATCAAGAGCCACAGGAAG	5	-	150958913-150958962		al60e03.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1461724 3, mRNA sequence					
Homo sapiens	RefSeq	NM_022048.2	ILMN_19512	CSNK1G1	NM_022048.2	NM_022048.2		53944	71773691	NM_022048.2	CSNK1G1	NP_071331.1	ILMN_1740549	0006220240	I	1417	CAGCCGGCAGACCAATACCTCATACCTAACGTCTCACTTGGCTGCAGACC	15	-	62267646-62267695	15q22.31a	Homo sapiens casein kinase 1, gamma 1 (CSNK1G1), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_942277.1	ILMN_164001	LOC731823	XM_001133747.1	XM_001133747.1		731823	113428594	XM_001133747.1	LOC731823	XP_001133747.1	ILMN_1800800	0002480142	A	1097	GGGGAGGAGGGTGTAGCTGGCGTGTCATCCTCAGGGCGCTTCCTCGCTCA					PREDICTED: Homo sapiens similar to Free fatty acid receptor 3 (G-protein coupled receptor 41), transcript variant 1 (LOC731823), mRNA.					
Homo sapiens	RefSeq	NM_005305.1	ILMN_164001	LOC731823	XM_001133747.1	XM_001133747.1		731823	113428594	XM_001133747.1	LOC731823	XP_001133747.1	ILMN_1671276	0000940156	S	361	TCCTGGCAGCTGTGAGCATTGAACGCTTCCTGAGTGTGGCCCACCCACTG					PREDICTED: Homo sapiens similar to Free fatty acid receptor 3 (G-protein coupled receptor 41), transcript variant 1 (LOC731823), mRNA.					FFAR1L; GPR41L
Homo sapiens	RefSeq	NM_016647.1	ILMN_25304	C8ORF55	NM_016647.2	NM_016647.2		51337	83776601	NM_016647.2	C8orf55	NP_057731.1	ILMN_1777740	0001470706	S	2138	AGCACTGCCCGATAGAACACGCCCGCCCTCACTGCTGTTCTTGCCTTACA	8	+	143814569-143814618	8q24.3e	Homo sapiens chromosome 8 open reading frame 55 (C8orf55), mRNA.				DSCD75	DSCD75
Homo sapiens	RefSeq	NM_139348.1	ILMN_23880	BIN1	NM_139346.1	NM_139346.1		274	21536406	NM_139346.1	BIN1	NP_647596.1	ILMN_1674160	0005130440	A	2045	GTGTTCCTGAAGCTGCTGTGTCCTCTAGTTGAGTTTCTGGCGCCCCTGCC	2	-	127805846-127805895	2q14.3d	Homo sapiens bridging integrator 1 (BIN1), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9182667] [evidence TAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8782822] [evidence TAS]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC10367; AMPH2; DKFZp547F068; SH3P9; AMPHL	MGC10367; AMPH2; DKFZp547F068; SH3P9; AMPHL
Homo sapiens	RefSeq	NM_006362.4	ILMN_11773	NXF1	NM_006362.4	NM_006362.4		10482	125625327	NM_006362.4	NXF1	NP_006353.2	ILMN_2358652	0004850497	A	1977	AAGTGGCATTCATGAAGTGATCGTAGTCATGCCTCAGAAGCAGTCCCCCC	11	-	62559917-62559947:62559948-62559966	11q12.3b	Homo sapiens nuclear RNA export factor 1 (NXF1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Intranuclear foci at which aggregated proteins have been sequestered [goid 42405] [evidence IEA]	The directed movement of RNA from the nucleus to the cytoplasm [goid 6405] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm [goid 16973] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with pre-messenger RNA (pre-mRNA) or messenger RNA (mRNA) [goid 3729] [evidence IEA]; Enables the directed movement of substances between the nucleus and the cytoplasm of a cell [goid 5487] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10924507] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15184380] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11583626] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9175835] [evidence IPI]	MEX67; TAP; DKFZp667O0311	MEX67; TAP; DKFZp667O0311
Homo sapiens	RefSeq	NM_178499.2	ILMN_29397	CCDC60	NM_178499.2	NM_178499.2		160777	31341910	NM_178499.2	CCDC60	NP_848594.1	ILMN_1722446	0002140544	S	2172	GTTCCTGTATCCTGCCTGTGTTCCTGCCTCCTGACTACCCTCATGGATGC	12	+	118462957-118463006	12q24.23b-q24.23c	Homo sapiens coiled-coil domain containing 60 (CCDC60), mRNA.				MGC39827	MGC39827
Homo sapiens	Unigene	Hs.568951	ILMN_121132	HS.568951	Hs.568951		Hs.568951		22911320	BU561024			ILMN_1844290	0001400736	S	467	GGCCAATGCTGTTCCTGAGAGTCCTTCCTGGAGAGCCATCTGCACACAGA	11	-	58021852-58021901		AGENCOURT_10278999 NIH_MGC_82 Homo sapiens cDNA clone IMAGE:6591845 5, mRNA sequence					
Homo sapiens	RefSeq	NM_014913.2	ILMN_6906	ADNP2	NM_014913.2	NM_014913.2		22850	48762755	NM_014913.2	ADNP2	NP_055728.1	ILMN_2080751	0007330270	S	5052	TAAAGCACCAGAACCAGTCATGGAGACCAGCCAGTTTAGATGGTAAGTCA	18	+	75998884-75998933	18q23d	Homo sapiens ADNP homeobox 2 (ADNP2), mRNA.				KIAA0863; ZNF508	KIAA0863; ZNF508
Homo sapiens	RefSeq	NM_030917.2	ILMN_6961	FIP1L1	NM_030917.2	NM_030917.2		81608	40254977	NM_030917.2	FIP1L1	NP_112179.2	ILMN_1768743	0005270039	S	1436	TCCCCATCTTCCTGGTTCTGCTCCTTCGTGGCCTAGTCTTGTGGACACCA	4	+	54013851-54013900	4q12b	Homo sapiens FIP1 like 1 (S. cerevisiae) (FIP1L1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ33619; DKFZp586K0717; Rhe	FLJ33619; DKFZp586K0717; Rhe
Homo sapiens	RefSeq	NM_030917.2	ILMN_6961	FIP1L1	NM_030917.2	NM_030917.2		81608	40254977	NM_030917.2	FIP1L1	NP_112179.2	ILMN_2190942	0004070709	S	1691	GCGTCACAGAGCAAGTCGAGAAAAAGAAGAACGACATAGAGAAAGACGAC	4	+	54019625-54019674	4q12b	Homo sapiens FIP1 like 1 (S. cerevisiae) (FIP1L1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	FLJ33619; DKFZp586K0717; Rhe	FLJ33619; DKFZp586K0717; Rhe
Homo sapiens	RefSeq	NM_002461.1	ILMN_2771	MVD	NM_002461.1	NM_002461.1		4597	4505288	NM_002461.1	MVD	NP_002452.1	ILMN_1657550	0001440020	S	1488	AGGGCTGAAGGGCTTTCTCACCCCAGCTCTGGCTATGCCCAGTTCTCTGA	16	-	88718605-88718654	16q24.3a	Homo sapiens mevalonate (diphospho) decarboxylase (MVD), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8626466] [evidence EXP]	The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [evidence IEA]	Catalysis of the reaction: ATP + (R)-5-diphosphomevalonate = ADP + phosphate + isopentenyl diphosphate + CO2 [goid 4163] [pmid 8626466] [evidence EXP]; Catalysis of the reaction: ATP + (R)-5-diphosphomevalonate = ADP + phosphate + isopentenyl diphosphate + CO2 [goid 4163] [pmid 8626466] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	FP17780; MPD	FP17780; MPD
Homo sapiens	RefSeq	XR_042384.1	ILMN_337322	LOC646438	XR_042384.1	XR_042384.1		646438	169217001	XR_042384.1	LOC646438		ILMN_3201944	0003780066	A	5	CTCCTACAAAGCTGACTTCCCGCAAATCGACTGGTGGTAAAACACCCGGG				Xp21.3a	PREDICTED: Homo sapiens misc_RNA (LOC646438), partial miscRNA.					
Homo sapiens	RefSeq	NM_178491.2	ILMN_178692	R3HDML	NM_178491.2	NM_178491.2		140902	60279649	NM_178491.2	R3HDML	NP_848586.1	ILMN_1774238	0004570397	S	963	GCTGGGCCTGACCCTCCATGTCCTGCCCTCAAAAAACTGGGTGGAGAAAT	20	+	42412875-42412924	20q13.12a	Homo sapiens R3H domain containing-like (R3HDML), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of an endopeptidase, any enzyme that hydrolyzes nonterminal peptide bonds in polypeptides [goid 4866] [evidence IEA]	MGC129564; dJ881L22.3	MGC129564; dJ881L22.3
Homo sapiens	RefSeq	NR_029835.1	ILMN_388097	MIR302A	NR_029835.1	NR_029835.1		407028	262206077	NR_029835.1	MIR302A		ILMN_3308823	0005820110	S	3	CCACTTAAACGTGGATGTACTTGCTTTGAAACTAAAGAAGTAAGTGCTTC				4q25f	Homo sapiens microRNA 302a (MIR302A), microRNA.					
Homo sapiens	RefSeq	NM_003419.2	ILMN_164441	ZNF345	NM_003419.3	NM_003419.3		25850	142350598	NM_003419.3	ZNF345	NP_003410.1	ILMN_1778886	0006290674	S	1078	GCATGTGGAATGGCCTTTAGCAGTGGTTCGGCTCTTACTCGGCATCAGAG	19	+	37368432-37368481	19q13.12b	Homo sapiens zinc finger protein 345 (ZNF345), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 9278146] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA ploymerase III promoter [goid 6359] [pmid 9278146] [evidence TAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Functions to enable the transcription of specific, or specific sets, of genes by RNA polymerase II [goid 3704] [pmid 9278146] [evidence TAS]; Functions to initiate or regulate RNA polymerase III transcription [goid 3709] [pmid 9278146] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	HZF10	HZF10
Homo sapiens	RefSeq	NM_005165.2	ILMN_15767	ALDOC	NM_005165.2	NM_005165.2		230	68303552	NM_005165.2	ALDOC	NP_005156.1	ILMN_1755974	0007330544	S	1517	CCATGATGAGGTAGCTTCTCCCTGGGCTCTCCTTCTTGCCTGCCCTGTCT	17	-	26900217-26900266	17q11.2a	Homo sapiens aldolase C, fructose-bisphosphate (ALDOC), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 6000] [pmid 3105602] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate [goid 4332] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate [goid 4332] [pmid 3105602] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	ALDC	ALDC
Homo sapiens	RefSeq	XM_001725304.1	ILMN_340159	LOC100128477	XM_001725304.1	XM_001725304.1		100128477	169169816	XM_001725304.1	LOC100128477	XP_001725356.1	ILMN_3259081	0004780017	M	712	CCGCTCGTGTGTCTGCCCACTAGGGTCTCGGGTTTTTATAGGCCCAGGAT				6q21h	PREDICTED: Homo sapiens hypothetical protein LOC100128477 (LOC100128477), mRNA.					
Homo sapiens	Unigene	Hs.175811	ILMN_80511	HS.175811	Hs.175811		Hs.175811		13708322	BG186635			ILMN_1881212	0001570431	S	38	CTCAACTACTGGACCCAGACAATCCTCACACTTTGGCCTCCCAAATGCTG	12	+	38846379-38846403:38846406-38846418:38847317-38847328		RST5607 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_938835.1	ILMN_36145	LOC649765	XM_938835.1	XM_938835.1		649765	89061347	XM_938835.1	LOC649765	XP_943928.1	ILMN_1783556	0005050091	S	609	GGAGTATCAGGTTGGTATCCTCTTCACCCAGTCCATCAGTCAGGGCCTCT					PREDICTED: Homo sapiens similar to testis specific protein, Y-linked 1 (LOC649765), mRNA.					
Homo sapiens	RefSeq	NM_053016.3	ILMN_163944	PALM2	NM_053016.4	NM_053016.4		114299	82524850	NM_053016.4	PALM2	NP_443749.4	ILMN_1698445	0004260544	S	1241	GAGAGCCTAGCTACAGAGCCAGCCCCAGGTACCCAAAAGAAAAAGCGCTG	9	+	111745455-111745504	9q31.3a	Homo sapiens paralemmin 2 (PALM2), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Control of the spatial distribution of actin filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 7015] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand [goid 7178] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence IEA]	Interacting selectively with any subunit of protein kinase A [goid 51018] [evidence IEA]	AKAP2	AKAP2
Homo sapiens	RefSeq	NR_022008.1	ILMN_357062	PAR5	NR_022008.1	NR_022008.1		8123	183238674	NR_022008.1	PAR5		ILMN_3241803	0007510523	S	3304	TCTGCCTAATACCTACCCTTTTGGAGGAAGGAAAGGTAATCCTGTTTGTG	15	+	25233310-25233359	15q11.2e	Homo sapiens Prader-Willi/Angelman syndrome-5 (PAR5), non-coding RNA.					
Homo sapiens	RefSeq	NM_001004729.1	ILMN_19095	OR5AN1	NM_001004729.1	NM_001004729.1		390195	52317110	NM_001004729.1	OR5AN1	NP_001004729.1	ILMN_1711929	0004290296	S	694	GCTAAAGGCAGGTCCAAGGCATTCAACACCTGTGCTTCTCATCTAACAGC	11	+	58889201-58889250	11q12.1d	Homo sapiens olfactory receptor, family 5, subfamily AN, member 1 (OR5AN1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-244	OR11-244
Homo sapiens	Unigene	Hs.534658	ILMN_102457	HS.534658	Hs.534658		Hs.534658		3229328	AI014992			ILMN_1879067	0004180373	S	102	TCAGATCCTCACTGGAGACATCGAAAGCAAGGCACGCCCACAGAGTGGAG	12	+	9378517-9378566		ov50f10.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1640779 3, mRNA sequence					
Homo sapiens	RefSeq	NM_004167.3	ILMN_2490	CCL15	NM_004167.3	NM_004167.3		6359	34335181	NM_004167.3	CCL15	NP_004158.2	ILMN_2255130	0006900687	I	972	GGGACCAAGACTGAATCCTCCTCACAAACTGGGGGGAAACCGAAGGTTGT				17q12b	Homo sapiens chemokine (C-C motif) ligand 15 (CCL15), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9548457] [evidence TAS]	The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [pmid 9346309] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 9600961] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9548457] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9548457] [evidence TAS]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9346309] [evidence TAS]; The function of a family of chemotactic pro-inflammatory activation-inducible cytokines acting primarily upon hemopoietic cells in immunoregulatory processes; all chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation [goid 8009] [pmid 9346309] [evidence TAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Providing the environmental signal that initiates the directed movement of a motile cell or organism towards a higher concentration of that signal [goid 42056] [pmid 15001559] [evidence IDA]	SCYL3; NCC3; MIP-5; HCC-2; NCC-3; LKN1; SY15; MIP-1d; SCYA15; Lkn-1; HMRP-2B	NCC3; HCC-2; NCC-3; LKN1; MIP-1d; HMRP-2B; SCYL3; MIP-5; SY15; SCYA15; Lkn-1
Homo sapiens	RefSeq	NM_022825.2	ILMN_19819	PORCN	NM_022825.2	NM_022825.2		64840	45439328	NM_022825.2	PORCN	NP_073736.2	ILMN_2337058	0003290343	A	1228	TGGCTCGGATCCTCAGTGCCTGTGTCTTGTCAAAGCGGTGCCCGCCAGAC	X	+	48259408-48259457	Xp11.23d	Homo sapiens porcupine homolog (Drosophila) (PORCN), transcript variant A, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FODH; DHOF; PPN; MG61; por; PORC; MGC29687	FODH; DHOF; PPN; MG61; por; PORC; MGC29687
Homo sapiens	RefSeq	XR_039235.1	ILMN_350250	LOC100128841	XR_039235.1	XR_039235.1		100128841	169203346	XR_039235.1	LOC100128841		ILMN_3270629	0002350180	M	1520	CAGCTGCACTGGAAAGGGAACTAAGGGAAGCCCAGCAGGCCCAGTCCCTG				11p13a	PREDICTED: Homo sapiens misc_RNA (LOC100128841), miscRNA.					
Homo sapiens	RefSeq	NM_001032377.1	ILMN_183114	SULT6B1	NM_001032377.1	NM_001032377.1		391365	74024918	NM_001032377.1	SULT6B1	NP_001027549.1	ILMN_1653386	0000160553	S	586	GGGGAGCAAATTCAAACTATCTCAGTCCAGAGCACCTTCCAAGCCATGCG	2	-	37398629-37398678	2p22.2b	Homo sapiens sulfotransferase family, cytosolic, 6B, member 1 (SULT6B1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate [goid 8146] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	Unigene	Hs.542920	ILMN_106615	HS.542920	Hs.542920		Hs.542920		19762779	BQ027500			ILMN_1871488	0007050754	S	379	TGGAGTGGCTGTCATGATCCAAGATGGATCTGCCTTTCCCCAAGGGCTGG	3	-	151448158-151448207		UI-H-CO0-aqq-a-10-0-UI.s1 NCI_CGAP_Sub9 Homo sapiens cDNA clone IMAGE:3104897 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001714924.1	ILMN_339566	FAM75A4	XM_001714924.1	XM_001714924.1		642629	169174615	XM_001714924.1	FAM75A4	XP_001714976.1	ILMN_3258385	0006620086	M	3864	CAAGCCACTCTCAAGAGCCAGGGTTGTCCCAACAGAGACAGACAAATCAG	9	-	41311446-41311495	9p12a	PREDICTED: Homo sapiens family with sequence similarity 75, member A4, transcript variant 1 (FAM75A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_001714924.1	ILMN_339566	FAM75A4	XM_001714924.1	XM_001714924.1		642629	169174615	XM_001714924.1	FAM75A4	XP_001714976.1	ILMN_3181927	0006380685	A	3358	GGCCAATGTTTCCCCCTATTCACAAGAGTGAGAAGTCTAGGAAACCCAAC	9	-	41311952-41312001	9p12a	PREDICTED: Homo sapiens family with sequence similarity 75, member A4, transcript variant 1 (FAM75A4), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NR_031646.1	ILMN_388721	MIR548F5	NR_031646.1	NR_031646.1		100302239	269847252	NR_031646.1	MIR548F5		ILMN_3310945	0003830438	S	9	GCTGCAAAAGTAATCATGTTTTTTTCCATTGTAAGTAATGGGAAAAACTG					Homo sapiens microRNA 548f-5 (MIR548F5), microRNA.					
Homo sapiens	RefSeq	XR_041574.1	ILMN_349118	LOC284688	XR_041574.1	XR_041574.1		284688	169161886	XR_041574.1	LOC284688		ILMN_3292042	0001240465	M	211	TGCACCAGGCACCAAGAACTATCCCCATCCCACCACCCCAGATCCCAAGG				1q24.2c	PREDICTED: Homo sapiens misc_RNA (LOC284688), miscRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA [goid 6334] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	NM_019053.3	ILMN_6683	EXOC6	NM_019053.3	NM_019053.3		54536	65507402	NM_019053.3	EXOC6	NP_061926.3	ILMN_1679687	0007570278	I	33	CTCAGCTTCCAGCCAAAATGGCGGAGAACAGCGAGAGTCTGGGCACCGTC	10	+	94598254-94598270:94598271-94598303	10q23.33a	Homo sapiens exocyst complex component 6 (EXOC6), transcript variant 1, mRNA.				SEC15L1; SEC15L3; EXOC6A; Sec15p; DKFZp761I2124; FLJ1125; FLJ11251; SEC15L; MGC33397	SEC15L1; SEC15L3; EXOC6A; Sec15p; DKFZp761I2124; FLJ1125; FLJ11251; SEC15L; MGC33397
Homo sapiens	RefSeq	NM_001013848.1	ILMN_6683	EXOC6	NM_019053.3	NM_019053.3		54536	65507402	NM_019053.3	EXOC6	NP_061926.3	ILMN_1651628	0007330196	A	3242	GTGCGAGGGTAGATGGTTCCTGCACACAGAAGTTACCACAGGGGTCAGGT	10	+	94808880-94808929	10q23.33a	Homo sapiens exocyst complex component 6 (EXOC6), transcript variant 1, mRNA.				SEC15L1; SEC15L3; EXOC6A; Sec15p; DKFZp761I2124; FLJ1125; FLJ11251; SEC15L; MGC33397	SEC15L1; SEC15L3; EXOC6A; Sec15p; DKFZp761I2124; FLJ1125; FLJ11251; SEC15L; MGC33397
Homo sapiens	RefSeq	NM_198124.1	ILMN_29911	CSMD3	NM_198124.1	NM_198124.1		114788	38045889	NM_198124.1	CSMD3	NP_937757.1	ILMN_1730996	0000940598	I	176	GGAGTTGGTTCCTTTGCTGGAAACCTGTACAGCTTGACCGACAGACAGCC	8	-	114458146-114458195	8q23.3b-q23.3c	Homo sapiens CUB and Sushi multiple domains 3 (CSMD3), transcript variant b, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA1894	KIAA1894
Homo sapiens	RefSeq	XM_927707.1	ILMN_37329	LOC644592	XM_927707.1	XM_927707.1		644592	88943852	XM_927707.1	LOC644592	XP_932800.1	ILMN_1669984	0003710142	S	804	CTCCGAGAACACCAGCCCCTGGCAGTTTCCTGAACGCAGTGACCCCGCTG	1	+	225053580-225053629	1q42.12d	PREDICTED: Homo sapiens similar to Ankyrin-2 (Brain ankyrin) (Ankyrin-B) (Ankyrin, nonerythroid) (LOC644592), mRNA.					
Homo sapiens	RefSeq	NM_031475.1	ILMN_7287	ESPN	NM_031475.1	NM_031475.1		83715	13899328	NM_031475.1	ESPN	NP_113663.1	ILMN_1806710	0003440630	S	3435	TGACCCTGTGTCTCCAACTGCTGCACCCCATCCCGACCCTGTCTCCGCCA	1	+	6443495-6443544	1p36.31a	Homo sapiens espin (ESPN), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A prolongation or process extending from a cell, e.g. a flagellum or axon [goid 42995] [evidence IEA]	The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	DKFZP434A196; DFNB36; LP2654	DKFZP434A196; DFNB36; LP2654
Homo sapiens	RefSeq	NM_139177.2	ILMN_22266	SLC39A11	NM_139177.2	NM_139177.2		201266	31542247	NM_139177.2	SLC39A11	NP_631916.1	ILMN_1742705	0002470609	S	2476	GAATCTCCTGCTCTGTGAATGCTATCAGACCCCAAAGGCCAACCTTGGGC	17	-	68153894-68153943	17q24.3c-q25.1a	Homo sapiens solute carrier family 39 (metal ion transporter), member 11 (SLC39A11), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of zinc (Zn) ions into, out of, within or between cells [goid 6829] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	C17orf26	C17orf26
Homo sapiens	RefSeq	NM_001031617.1	ILMN_15655	COX19	NM_001031617.2	NM_001031617.2		90639	110349770	NM_001031617.2	COX19	NP_001026788.1	ILMN_1656656	0001450255	S	3531	GCTCTCCAGCCTGAGCAACAGAGCCGGACCCTGTCTCACCAAAGGAAAAA	7	-	1005796-1005845	7p22.3c	Homo sapiens COX19 cytochrome c oxidase assembly homolog (S. cerevisiae) (COX19), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			MGC104475	MGC104475
Homo sapiens	RefSeq	XM_928094.1	ILMN_163725	C15ORF51	NR_003260.1	NR_003260.1		196968	117606204	NR_003260.1	C15orf51		ILMN_1709024	0000270367	I	172	CATGCTTCAGTTGGCTGGAGTGAGCAATTCAACTTGTGGAGGAGTGAGAA	15	-	100345045-100345094	15q26.3b	Homo sapiens chromosome 15 open reading frame 51 (C15orf51), non-coding RNA.				DKFZp434I1020; FLJ45937; MGC119618	
Homo sapiens	RefSeq	XM_945239.1	ILMN_32594	LOC654042	XM_945239.1	XM_945239.1		654042	89037559	XM_945239.1	LOC654042	XP_950332.1	ILMN_1800465	0004010543	I	903	TGCTTCAACCCTGCATCATCCCTTGAGTACCCCAAAGAAACAGCTGGTAC					PREDICTED: Homo sapiens similar to dehydrogenase/reductase (SDR family) member 4 like 2, transcript variant 4 (LOC654042), mRNA.					
Homo sapiens	RefSeq	XM_938433.1	ILMN_35669	C20ORF123	XM_938433.2	XM_938433.2		128506	113429032	XM_938433.2	C20orf123	XP_943526.1	ILMN_1677441	0005290196	A	1658	CCCACGCAGGGATGTGGTCAGGATGGAAGGAAATACTGGGCATGATAGGC				20q13.12c	PREDICTED: Homo sapiens chromosome 20 open reading frame 123 (C20orf123), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	XM_942873.1	ILMN_45997	LOC647509	XM_942873.1	XM_942873.1		647509	89033701	XM_942873.1	LOC647509	XP_947966.1	ILMN_1652450	0001430672	S	2280	TGGACTATGGGTCCCGAGCAGTTCCAGGTTGCTGAACACATCCACGGGCC				10q26.3f	PREDICTED: Homo sapiens hypothetical protein LOC647509 (LOC647509), mRNA.					
Homo sapiens	RefSeq	NM_017929.3	ILMN_2784	PEX26	NM_017929.3	NM_017929.3		55670	95113668	NM_017929.3	PEX26	NP_060399.1	ILMN_2130409	0002680528	S	1459	GGAGCTGGAAGTTCAGAAAAAGCCTGGTGAAGTGACCCTTGGCCTTTCAC	22	+	16951192-16951241	22q11.21a	Homo sapiens peroxisome biogenesis factor 26 (PEX26), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [pmid 15858711] [evidence IDA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a peroxisomal membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5779] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The import of proteins into the peroxisomal matrix. A peroxisome targeting signal (PTS) binds to a soluble receptor protein in the cytosol, and the resulting complex then binds to a receptor protein in the peroxisome membrane and is imported [goid 16558] [pmid 15858711] [evidence IMP]; The targeting of proteins into the peroxisomal membrane. The process is not well understood, but both signals and mechanism differ from those involved in peroxisomal matrix protein import [goid 45046] [evidence IEA]; The targeting of proteins into the peroxisomal membrane. The process is not well understood, but both signals and mechanism differ from those involved in peroxisomal matrix protein import [goid 45046] [evidence IEA]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 15713480] [evidence IPI]; Interacting selectively with any protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 32403] [pmid 16854980] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PEX26M1T; FLJ20695; Pex26pM1T	PEX26M1T; FLJ20695; Pex26pM1T
Homo sapiens	Unigene	Hs.149786	ILMN_78885	HS.149786	Hs.149786		Hs.149786		6025420	AW070422			ILMN_1834252	0004480619	S	204	AGTCTCAGAAAGTTTGAACTGGGGAACAGGGGCTGTCATTTGAGTGTGGC	9	-	13934404-13934449:13935391-13935394		xa11a05.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2567984 3, mRNA sequence					
Homo sapiens	RefSeq	XM_933202.1	ILMN_34580	LOC645848	XM_933202.1	XM_933202.1		645848	88986496	XM_933202.1	LOC645848	XP_938295.1	ILMN_1655047	0004260356	S	13	GGCAAACTCCTAGTCATCCTTCCAAAGACCCTGCTCCACAGCCCTGCCGA	5	+	177490110-177490159	5q35.3b	PREDICTED: Homo sapiens hypothetical LOC645848 (LOC645848), mRNA.					
Homo sapiens	RefSeq	XM_938842.1	ILMN_31627	LOC654080	XM_938842.1	XM_938842.1		654080	89035186	XM_938842.1	LOC654080	XP_943935.1	ILMN_1732329	0002370554	S	23	GAGCTCTCATCTTGTCTGTTGAAGATGACTCAGTCAGCAGGATGGACCTG					PREDICTED: Homo sapiens similar to Proprotein convertase subtilisin/kexin type 7 precursor (Proprotein convertase PC7) (Subtilisin/kexin-like protease PC7) (Prohormone convertase PC7) (PC8) (hPC8) (Lymphoma proprotein convertase) (LOC654080), mRNA.					
Homo sapiens	RefSeq	NM_173650.1	ILMN_9250	DNAJC5G	NM_173650.1	NM_173650.1		285126	27735106	NM_173650.1	DNAJC5G	NP_775921.1	ILMN_1725554	0003870241	S	1853	TCCCACTCTTGCCTCTTTGTGCTGCTGTTTCGTATCCTCCTCACACCGTG	2	+	27357647-27357696	2p23.3a	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 5 gamma (DNAJC5G), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	CSP-gamma; FLJ40417	CSP-gamma; FLJ40417
Homo sapiens	Unigene	Hs.123119	ILMN_75917	HS.123119	Hs.123119		Hs.123119		21754347	AK095147			ILMN_1839481	0006130609	S	1991	TGTGTGATCCTTGTCCGTGGCAACCTTAAACGTGTGCTGCAGTGCTGATG	13	+	36317660-36317709		Homo sapiens cDNA FLJ37828 fis, clone BRSSN2006575					
Homo sapiens	RefSeq	NM_207497.1	ILMN_10576	FLJ43752	NM_207497.1	NM_207497.1		401253	46409621	NM_207497.1	FLJ43752	NP_997380.1	ILMN_1717726	0006220241	S	1889	CTGGAACCCAAACTGCCTGCACTCAAGTCCCAGCTCTGCCCATCACTAGC	6	-	33662029-33662078	6p21.31f	Homo sapiens FLJ43752 protein (FLJ43752), mRNA.					
Homo sapiens	Unigene	Hs.547587	ILMN_109571	HS.547587	Hs.547587		Hs.547587		9871226	AV650212			ILMN_1911344	0003520575	S	275	TACAGGAAGAAGATGGGGCAGGGCTGGAGTTTGAGGGACCAAGGGCAGGA	10	-	135017963-135018012		AV650212 GLC Homo sapiens cDNA clone GLCCCD12 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020195.2	ILMN_4144	SDR39U1	NM_020195.2	NM_020195.2		56948	116812629	NM_020195.2	SDR39U1	NP_064580.2	ILMN_3248985	0005490315	S	304	AAGCCATCACCAAAGCCCCACAACCCCCCAAGGCCTGGGTCTTAGTCACA	14	-	24910886-24910935	14q12a	Homo sapiens short chain dehydrogenase/reductase family 39U, member 1 (SDR39U1), mRNA.				HCDI	HCDI
Homo sapiens	RefSeq	NM_031925.1	ILMN_9004	TMEM120A	NM_031925.1	NM_031925.1		83862	13994299	NM_031925.1	TMEM120A	NP_114131.1	ILMN_1654516	0006270634	S	1055	CCACAAGTTTCACAGTCAGCGGCACGGGAGCAAGAAGGATTGAGGCTGGG	7	-	75454418-75454425:75454426-75454467	7q11.23e	Homo sapiens transmembrane protein 120A (TMEM120A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TMPIT	TMPIT
Homo sapiens	RefSeq	NM_002553.2	ILMN_6212	ORC5L	NM_002553.2	NM_002553.2		5001	32454752	NM_002553.2	ORC5L	NP_002544.1	ILMN_1705093	0003800110	I	1737	ACATTTTGCTCTGTGAACTATCCCCTGCGCTTTGAACGTGCCAGCAGCCC	7	-	103766927-103766976	7q22.1g-q22.1h	Homo sapiens origin recognition complex, subunit 5-like (yeast) (ORC5L), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9765232] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15684404] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11125146] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9765232] [evidence NAS]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [pmid 9765232] [evidence NAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [pmid 9765232] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9765232] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 9765232] [evidence TAS]; Interacting selectively with the DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally [goid 3688] [pmid 9765232] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15232106] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ORC5T; ORC5; ORC5P	ORC5T; ORC5; ORC5P
Homo sapiens	RefSeq	NM_002553.2	ILMN_6212	ORC5L	NM_002553.2	NM_002553.2		5001	32454752	NM_002553.2	ORC5L	NP_002544.1	ILMN_1688094	0004010201	A	826	CCCGTGGTTAAAGGAGAAGCAAGTGAACGTGATACTCGCAAACTGTGGAG	7	-	103824450-103824481:103824571-103824588	7q22.1g-q22.1h	Homo sapiens origin recognition complex, subunit 5-like (yeast) (ORC5L), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9765232] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15684404] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11125146] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9765232] [evidence NAS]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [pmid 9765232] [evidence NAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process by which DNA replication is started; this involves the separation of a stretch of the DNA double helix, the recruitment of DNA polymerases and the initiation of polymerase action [goid 6270] [pmid 9765232] [evidence TAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9765232] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [pmid 9765232] [evidence TAS]; Interacting selectively with the DNA replication origin, a unique DNA sequence of a replicon at which DNA replication is initiated and proceeds bidirectionally or unidirectionally [goid 3688] [pmid 9765232] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 15232106] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ORC5T; ORC5; ORC5P	ORC5T; ORC5; ORC5P
Homo sapiens	Unigene	Hs.574874	ILMN_127055	HS.574874	Hs.574874		Hs.574874		4898376	AI687082			ILMN_1887935	0000650551	S	131	TGCAAGGGGCTCACATGGCAAGAGAGGAAACACGAGAGTCTAGGAAGCTG	9	-	69004660-69004709		tp92h10.x1 NCI_CGAP_Ut3 Homo sapiens cDNA clone IMAGE:2206819 3 similar to contains element MER10 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_003100.2	ILMN_164977	SNX2	NM_003100.2	NM_003100.2		6643	23111037	NM_003100.2	SNX2	NP_003091.2	ILMN_1691575	0005550736	S	1788	CAAGCTGCATGTCCTGACCCTCTTTGAATTAAGTGGACTGTGGCATGACA	5	+	122163296-122163341:122163286-122163289	5q23.2a	Homo sapiens sorting nexin 2 (SNX2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11279102] [evidence IDA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 9819414] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14596906] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	TRG-9; MGC5204	TRG-9; MGC5204
Homo sapiens	RefSeq	NM_003147.4	ILMN_163873	SSX2	NM_003147.4	NM_003147.4		6757	28559004	NM_003147.4	SSX2	NP_003138.3	ILMN_2292723	0006620364	I	622	CGGTGGAGCAGTCAGAACACACACAACATTGGTCGATTCAGTTTGTCAAC	X	-	52744609-52744658	Xp11.22b	Homo sapiens synovial sarcoma, X breakpoint 2 (SSX2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 7951320] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7539744] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12007189] [evidence IPI]	HD21; MGC119055; SSX; HOM-MEL-40; MGC3884; MGC15364	HD21; MGC119055; SSX; HOM-MEL-40; MGC3884; MGC15364
Homo sapiens	RefSeq	NM_175698.1	ILMN_163873	SSX2	NM_003147.4	NM_003147.4		6757	28559004	NM_003147.4	SSX2	NP_003138.3	ILMN_1676207	0002850463	A	22	CTTTCGATTCTTCCATACTCAGAGTACGCACGGTCTGATTTTCTCTTTGG	X	-	52752903-52752952	Xp11.22b	Homo sapiens synovial sarcoma, X breakpoint 2 (SSX2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 7951320] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7539744] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12007189] [evidence IPI]	HD21; MGC119055; SSX; HOM-MEL-40; MGC3884; MGC15364	HD21; MGC119055; SSX; HOM-MEL-40; MGC3884; MGC15364
Homo sapiens	RefSeq	XM_937506.1	ILMN_163873	SSX2	NM_003147.4	NM_003147.4		6757	28559004	NM_003147.4	SSX2	NP_003138.3	ILMN_1684697	0004490228	A	43	GAGTACGCACGGTCTGATTTTCTCTTTGGATTCTTCCAAAATCAGAGTCA	X	-	52751540-52751544:52752887-52752931	Xp11.22b	Homo sapiens synovial sarcoma, X breakpoint 2 (SSX2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 7951320] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7539744] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12007189] [evidence IPI]	HD21; MGC119055; SSX; HOM-MEL-40; MGC3884; MGC15364	
Homo sapiens	RefSeq	XM_925889.1	ILMN_163873	SSX2	NM_003147.4	NM_003147.4		6757	28559004	NM_003147.4	SSX2	NP_003138.3	ILMN_1665639	0005290224	A	438	GATCATGCCCAAGAAGCCAGCAGAGGAAGGAAATGATTCGGAGGAAGTGC	X	-	52746304-52746353	Xp11.22b	Homo sapiens synovial sarcoma, X breakpoint 2 (SSX2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 7951320] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7539744] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12007189] [evidence IPI]	HD21; MGC119055; SSX; HOM-MEL-40; MGC3884; MGC15364	
Homo sapiens	RefSeq	NM_003147.4	ILMN_163873	SSX2	NM_003147.4	NM_003147.4		6757	28559004	NM_003147.4	SSX2	NP_003138.3	ILMN_2404327	0003940168	A	826	CCTCAGGGATACGACACATGCCCATGATGAGAAGCAGAACGTGGTGACCT	X	-	52743243-52743292	Xp11.22b	Homo sapiens synovial sarcoma, X breakpoint 2 (SSX2), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 7951320] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7539744] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12007189] [evidence IPI]	HD21; MGC119055; SSX; HOM-MEL-40; MGC3884; MGC15364	HD21; MGC119055; SSX; HOM-MEL-40; MGC3884; MGC15364
Homo sapiens	RefSeq	XM_930898.1	ILMN_40541	KIAA0692	XM_930898.1	XM_930898.1		23141	89035828	XM_930898.1	KIAA0692	XP_935991.1	ILMN_1729248	0005420541	I	97	CATTGTAATGATAAGGAAATGTTGCGATCAAATAAGATTTAGACACACTT	12	-	131828157-131828206	12q24.33d	PREDICTED: Homo sapiens KIAA0692 protein, transcript variant 12 (KIAA0692), mRNA.					
Homo sapiens	RefSeq	NM_018119.2	ILMN_12465	POLR3E	NM_018119.2	NM_018119.2		55718	38146100	NM_018119.2	POLR3E	NP_060589.1	ILMN_3241257	0004150465	S	2415	ACGGTGCAGTGGACAGAAGGGATTATCCTCAGCCAGTCGCAGGGTCAGCT	16	+	22252654-22252703	16p12.1c	Homo sapiens polymerase (RNA) III (DNA directed) polypeptide E (80kD) (POLR3E), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]	RPC5; SIN	RPC5; SIN
Homo sapiens	RefSeq	XM_497655.2	ILMN_21917	PRAMEF7	NM_001012277.1	NM_001012277.1		441871	59676592	NM_001012277.1	PRAMEF7	NP_001012277.1	ILMN_1674089	0006940128	S	104	TCTTCCCCACACTGTTCATGGAGGCCTTCAGCAGGAGACGCTGTGAAACC	1	+	12900203-12900252	1p36.21d	Homo sapiens PRAME family member 7 (PRAMEF7), mRNA.					
Homo sapiens	RefSeq	NM_001012277.1	ILMN_21917	PRAMEF7	NM_001012277.1	NM_001012277.1		441871	59676592	NM_001012277.1	PRAMEF7	NP_001012277.1	ILMN_1670438	0004040543	S	235	AAATCTGTGCTGGAAGGGGTTGATGTGCTGTTGACCCAAGAGGTTCGCCC	1	+	12900334-12900383	1p36.21d	Homo sapiens PRAME family member 7 (PRAMEF7), mRNA.					
Homo sapiens	RefSeq	NM_001009824.1	ILMN_13281	GHRHR	NM_001009824.1	NM_001009824.1		2692	58530852	NM_001009824.1	GHRHR	NP_001009824.1	ILMN_1714884	0000940692	A	954	CAATATTATCCGCATCCTGGTGAGGAAACTGGAGCCAGCTCAGGGCAGCC	7	+	30981940-30981989	7p15.1a	Homo sapiens growth hormone releasing hormone receptor (GHRHR), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10962031] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10962031] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9482665] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7680413] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7680413] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence NAS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10084571] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 7680413] [evidence TAS]; The secretion of milk by the mammary gland [goid 7595] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IEA]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of any steroid hormone receptor signaling pathway [goid 33143] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IEA]; Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43567] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60124] [evidence IEA]; The process whose specific outcome is the progression of a somatotropin secreting cell over time, from its formation to the mature structure. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60133] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [pmid 10962031] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [pmid 10962031] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 7680413] [evidence TAS];  [goid 4999] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IEA]	GRFR; GHRFR; GHRHRpsv	GRFR; GHRFR; GHRHRpsv
Homo sapiens	RefSeq	NM_001009824.1	ILMN_13281	GHRHR	NM_001009824.1	NM_001009824.1		2692	58530852	NM_001009824.1	GHRHR	NP_001009824.1	ILMN_2275060	0004810093	I	1027	TACTGTGTGTTTGTGTCTGGGGATACTGGGAAAGGGTAACTGGAGGGGGA	7	+	30982013-30982048:30982049-30982062	7p15.1a	Homo sapiens growth hormone releasing hormone receptor (GHRHR), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10962031] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10962031] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9482665] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7680413] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7680413] [evidence TAS]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence NAS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10084571] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 7680413] [evidence TAS]; The secretion of milk by the mammary gland [goid 7595] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IEA]; The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus [goid 21984] [evidence IEA]; Any process involved in the maintenance of an internal equilibrium of water within an organism or cell [goid 30104] [evidence IEA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [evidence IEA]; Any process that modulates the frequency, rate or extent of the activity of any steroid hormone receptor signaling pathway [goid 33143] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of growth of an organism to reach its usual body size [goid 40018] [evidence IEA]; The chemical reactions and pathways involving any hormone, naturally occurring substances secreted by specialized cells that affects the metabolism or behavior of other cells possessing functional receptors for the hormone [goid 42445] [evidence IEA]; Any process that modulates the frequency, rate or extent of insulin-like growth factor receptor signaling [goid 43567] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; Any process that increases the frequency, rate or extent of the regulated release of growth hormone from a cell or group of cells [goid 60124] [evidence IEA]; The process whose specific outcome is the progression of a somatotropin secreting cell over time, from its formation to the mature structure. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin [goid 60133] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [pmid 10962031] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [pmid 10962031] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [pmid 7680413] [evidence TAS];  [goid 4999] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with growth hormone-releasing hormone to initiate a change in cell activity [goid 16520] [evidence IEA]	GRFR; GHRFR; GHRHRpsv	GRFR; GHRFR; GHRHRpsv
Homo sapiens	RefSeq	NR_015454.1	ILMN_363704	LOC92659	NR_015454.1	NR_015454.1		92659	207029354	NR_015454.1	LOC92659		ILMN_3235312	0002810504	S	1487	AGCTGGAGTCAGGGCAATTCCAACCAAGAAACTGCGGCAGGCCGGGTGCA	17	+	79888221-79888270		Homo sapiens hypothetical LOC92659 (LOC92659), non-coding RNA.					
Homo sapiens	RefSeq	XM_928195.2	ILMN_39884	LOC645159	XM_928195.2	XM_928195.2		645159	113411409	XM_928195.2	LOC645159	XP_933288.2	ILMN_3237941	0000630072	S	442	GTGCACTGTGTGTGAGGCCTGTGGGAAGGCAACTGACCCAGGAAGATTCC	1	+	147154289-147154338	1q21.1e	PREDICTED: Homo sapiens similar to ALR-like protein (LOC645159), mRNA.					
Homo sapiens	RefSeq	NM_001128600.1	ILMN_364419	LCE6A	NM_001128600.1	NM_001128600.1		448835	190610046	NM_001128600.1	LCE6A	NP_001122072.1	ILMN_3238649	0003850408	S	558	AGCGAGAACTAGGCTGAGCCACGCTGCTACTGCTCTCTTCCATTCACCCC	1	+	152816375-152816424	1q21.3c	Homo sapiens late cornified envelope 6A (LCE6A), mRNA.		The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]			
Homo sapiens	RefSeq	NM_032853.2	ILMN_162947	MUM1	NM_032853.2	NM_032853.2		84939	31652258	NM_032853.2	MUM1	NP_116242.2	ILMN_1764764	0006100630	S	4009	TCCGGAGCCGCCCTCCATTGTGGGTTCCTGAGAGTAGGACACATTGCCAT	19	+	1329257-1329306	19p13.3i	Homo sapiens melanoma associated antigen (mutated) 1 (MUM1), mRNA.				MGC163315; MGC131891; HSPC211; FLJ22283; FLJ14868; MUM-1	MGC163315; MGC131891; HSPC211; FLJ22283; FLJ14868; MUM-1
Homo sapiens	RefSeq	NM_015503.1	ILMN_26582	SH2B1	NM_015503.1	NM_015503.1		25970	24308080	NM_015503.1	SH2B1	NP_056318.1	ILMN_2061185	0005900181	S	4536	TAGGGACAGAGGAGGCCGAAATCCCTCCCCCATGCTTCCTGACCCTTGTT	16	+	28792705-28792754	16p11.2e	Homo sapiens SH2B adaptor protein 1 (SH2B1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any process involved in the controlled movement of a cell [goid 6928] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SH2B; DKFZp547G1110; FLJ30542; SH2-B	SH2B; DKFZp547G1110; FLJ30542; SH2-B
Homo sapiens	RefSeq	XM_943214.1	ILMN_33492	LOC340113	XM_943214.2	XM_943214.2		340113	113417020	XM_943214.2	LOC340113	XP_948307.1	ILMN_1794866	0004280176	A	1820	ATCCTGGTTTTGCCACCTGCTCGCCCACACTCTATGCCCTTCTCCTCCAC				5p13.3b	PREDICTED: Homo sapiens hypothetical protein LOC340113 (LOC340113), mRNA.					
Homo sapiens	RefSeq	NM_004620.2	ILMN_8846	TRAF6	NM_004620.2	NM_004620.2		7189	22027628	NM_004620.2	TRAF6	NP_004611.1	ILMN_2392143	0006330026	A	1725	TATTAGTGCGCTGTGAGGTCTCCACCCGCTTTGACATGGGTAGCCTTCGG	11	-	36511429-36511478	11p12d	Homo sapiens TNF receptor-associated factor 6 (TRAF6), transcript variant 2, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9744859] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9162092] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15125833] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12138165] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10066798] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10465784] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12609980] [evidence EXP]	Addition of multiple ubiquitin moieties to a protein, forming a ubiquitin chain [goid 209] [pmid 15125833] [evidence IDA]; The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of T cell cytokine production [goid 2726] [pmid 15125833] [evidence IMP]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The stimulation of the activity of NF-kappaB-inducing kinase through phosphorylation at specific residues [goid 7250] [pmid 15125833] [evidence IMP]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The process by which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class II protein complex. The peptide antigen is typically, but not always, processed from a whole protein [goid 19886] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-2 production [goid 32743] [pmid 15125833] [evidence IMP]; An immune response which is associated with resistance to intracellular bacteria, fungi, and protozoa, and pathological conditions such as arthritis, and which is typically orchestrated by the production of particular cytokines by T-helper 1 cells, most notably interferon-gamma, IL-2, and lymphotoxin [goid 42088] [evidence IEA]; The process whose specific outcome is the progression of a dentine-containing tooth over time, from its formation to the mature structure. A dentine-containing tooth is a hard, bony organ borne on the jaw or other bone of a vertebrate, and are composed mainly of dentine, a dense calcified substance, covered by a layer of enamel [goid 42475] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; The process by which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin [goid 43011] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45084] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-6 [goid 45410] [evidence IEA]; The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate [goid 48468] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [pmid 15125833] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of T cell activation [goid 50870] [pmid 15125833] [evidence IC ]; Any process that modulates the frequency, rate or extent of the regulated release of immunoglobulins from a cell or group of cells [goid 51023] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 15125833] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11397809] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15125833] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11751921] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11244088] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC:3310; RNF85	MGC:3310; RNF85
Homo sapiens	RefSeq	XR_039686.1	ILMN_345738	LOC730173	XR_039686.1	XR_039686.1		730173	169214064	XR_039686.1	LOC730173		ILMN_3303101	0004230044	M	364	GCCTACCCTGAAAGCCTTATCAAATGGACACCATCCATGAAGCAGCTGGC				19q13.43c	PREDICTED: Homo sapiens misc_RNA (LOC730173), miscRNA.					
Homo sapiens	RefSeq	XR_039686.1	ILMN_345738	LOC730173	XR_039686.1	XR_039686.1		730173	169214064	XR_039686.1	LOC730173		ILMN_3226495	0006840601	A	679	CCCATAGCTTTAAGAAGTACCTGCAAGGGTCAGGCGCAGTGGCTCACACC				19q13.43c	PREDICTED: Homo sapiens misc_RNA (LOC730173), miscRNA.					
Homo sapiens	RefSeq	NM_181798.1	ILMN_1126	KCNQ1	NM_181798.1	NM_181798.1		3784	32479524	NM_181798.1	KCNQ1	NP_861463.1	ILMN_1806150	0003180148	I	66	TGTGTCTGGAGTGTAGGATGGCACTGGTGCCGGGCCTGGATTTACTCAGC	11	+	2439325-2439374	11p15.5a-p15.4d	Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 1 (KCNQ1), transcript variant 2, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 8900283] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 8900283] [evidence TAS]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 8528244] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9020846] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8528244] [evidence NAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9020846] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA];  [goid 5251] [pmid 8900283] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	JLNS1; ATFB1; WRS; LQT; Kv1.9; RWS; Kv7.1; FLJ26167; SQT2; KCNA8; KVLQT1; KCNA9; LQT1	JLNS1; ATFB1; WRS; LQT; Kv1.9; RWS; Kv7.1; FLJ26167; SQT2; KCNA8; KVLQT1; KCNA9; LQT1
Homo sapiens	RefSeq	NM_001033952.1	ILMN_23196	CALCA	NM_001033952.1	NM_001033952.1		796	76880483	NM_001033952.1	CALCA	NP_001029124.1	ILMN_2327244	0001470204	A	165	TGCCCTGGAGAGCAGCCCAGCAGACCCGGCCACGCTCAGTGAGGACGAAG	11	-	14991568-14991617	11p15.2a	Homo sapiens calcitonin-related polypeptide alpha (CALCA), transcript variant 2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 18057382] [evidence IDA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 2408883] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 17267696] [evidence IDA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]; Terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters [goid 43195] [evidence IEA]	Attachment of the blastocyst to the uterine lining [goid 7566] [pmid 17983652] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11014233] [evidence IDA]; Any process that initiates the activity of an inactive protein kinase [goid 32147] [pmid 17983652] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity [goid 45762] [pmid 11014233] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of adenylate cyclase activity [goid 45762] [pmid 8078488] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [pmid 17241109] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [pmid 8078488] [evidence IDA]; The multiplication or reproduction of endothelial cells, resulting in the expansion of a cell population. Endothelial cells are thin flattened cells which line the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium [goid 1935] [pmid 17267696] [evidence IDA]; The process whose specific outcome is the progression of the vasculature over time, from its formation to the mature structure [goid 1944] [pmid 17267696] [evidence IDA]; The regulation of blood pressure mediated by detection of stimuli and a neurological response [goid 1976] [pmid 10642343] [evidence IDA]; An increase in the internal diameter of an artery, triggered by vasomotor suppression, during the chemoreceptor response to decreased blood pressure [goid 1984] [evidence IEA]; Any process that modulates the frequency or rate of heart contraction [goid 2027] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 1326102] [evidence IDA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 10822112] [evidence IDA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 16014619] [evidence IDA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 2408883] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone formation [goid 30279] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of a neurophysiological process [goid 31645] [evidence IEA]; Any process that activates or increases the frequency, rate, or extent of interleukin-1 alpha production [goid 32730] [pmid 16904178] [evidence IDA]; Any process that activates or increases the frequency, rate, or extent of interleukin-8 production [goid 32757] [pmid 16904178] [evidence IDA]; The orderly movement of endothelial cells into the extracellular matrix to form an endothelium [goid 43542] [pmid 17267696] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of macrophage differentiation [goid 45651] [pmid 10822112] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast differentiation [goid 45671] [pmid 10822112] [evidence IDA]; The process by which the force of blood traveling through the circulatory system is decreased [goid 45776] [pmid 10642343] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of bone formation [goid 45778] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone resorption [goid 45779] [pmid 10822112] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of vasodilation [goid 45909] [pmid 3266556] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of smooth muscle contraction [goid 45986] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pain stimulus. Pain stimuli cause activation of nociceptors, peripheral receptors for pain, include receptors which are sensitive to painful mechanical stimuli, extreme heat or cold, and chemical stimuli [goid 48265] [evidence IEA]; The series of events involved in the perception of pain in which a sensory temperature stimulus is received by a cell and converted into a molecular signal [goid 50965] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within the cytosol of a cell or between the cytosol and its surroundings [goid 51480] [pmid 9685362] [evidence IDA]; Any process that increases the concentration of calcium ions in the cytosol during the process of G-protein signaling coupled to IP3 second messenger [goid 51482] [pmid 9685362] [evidence IDA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with a calcitonin receptor [goid 31716] [pmid 8940110] [evidence IPI]; Interacting selectively with a calcitonin receptor [goid 31716] [pmid 8078488] [evidence IPI]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]; Interacting selectively with a calcitonin receptor [goid 31716] [evidence IEA]	CGRP-I; KC; CGRP; CALC1; MGC126648; CT; CGRP1	CGRP-I; KC; CT; CGRP1; CGRP; CALC1; MGC126648
Homo sapiens	Unigene	Hs.560560	ILMN_114322	HS.560560	Hs.560560		Hs.560560		6701877	AW295241			ILMN_1899048	0004670754	S	158	GTAACCTATAATCTGGGGAAAAGGGTCCCGAGGGCTGGGTCATCCCGTGC	17	-	44663514-44663563		UI-H-BI2-aht-b-03-0-UI.s1 NCI_CGAP_Sub4 Homo sapiens cDNA clone IMAGE:2727869 3, mRNA sequence					
Homo sapiens	Unigene	Hs.582526	ILMN_134707	HS.582526	Hs.582526		Hs.582526		15937254	BI825704			ILMN_1839369	0005960280	S	792	CCATAAGAGGGTGGAATGAGAGGATGACTGCAAGGACCTGGGATGTGTGC	5	+	121526677-121526702:121526705-121526715:121526717-121526721:121526723-121526730		603072689F1 NIH_MGC_119 Homo sapiens cDNA clone IMAGE:5164342 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001427.2	ILMN_171364	EN2	NM_001427.3	NM_001427.3		2020	126090912	NM_001427.3	EN2	NP_001418.2	ILMN_1685318	0005490377	S	2860	AGTGTATGGGGAAAGACCAATCCAACTGTCCATCTGTGGCTGGGACAGCC	7	+	154949752-154949801	7q36.3a	Homo sapiens engrailed homeobox 2 (EN2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1672471] [evidence TAS]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IEA]; The process whose specific outcome is the progression of the hindbrain over time, from its formation to the mature structure. The hindbrain is the posterior of the three primary divisions of the developing chordate brain, or the corresponding part of the adult brain (in vertebrates, includes the cerebellum, pons, and medulla oblongata and controls the autonomic functions and equilibrium) [goid 30902] [evidence IEA]; The process whose specific outcome is the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 48666] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	AUTS1; AUTS10	AUTS1
Homo sapiens	RefSeq	NM_003201.1	ILMN_173015	TFAM	NM_003201.1	NM_003201.1		7019	4507400	NM_003201.1	TFAM	NP_003192.1	ILMN_1715661	0000650326	S	1772	GCCAACTATGGCCTGTGGATCAAATCCAGCCTGCTGCCTGCTTTTTATGG	10	+	59825739-59825788	10q21.1e	Homo sapiens transcription factor A, mitochondrial (TFAM), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 8333869] [evidence TAS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 3594571] [evidence EXP]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby new strands of DNA are synthesized, using parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands [goid 6261] [pmid 8333869] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter [goid 6356] [pmid 8333869] [evidence TAS]; The synthesis of RNA from a mitochondrial DNA template, usually by a specific mitochondrial RNA polymerase [goid 6390] [pmid 8333869] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8333869] [evidence TAS]	MtTF1; mtTFA; TCF6; TCF6L2	MtTF1; mtTFA; TCF6; TCF6L2
Homo sapiens	RefSeq	XM_926683.1	ILMN_40118	LOC643350	XM_926683.1	XM_926683.1		643350	88974101	XM_926683.1	LOC643350	XP_931776.1	ILMN_1807538	0004890088	S	34	GGCCGGCACCGCCAGCCCTGGGCAGAAGAAACTCCGAACACATCTGAACA	4	-	45153095-45153121:45154148-45154170		PREDICTED: Homo sapiens hypothetical protein LOC643350 (LOC643350), mRNA.					
Homo sapiens	RefSeq	NM_006851.1	ILMN_3517	GLIPR1	NM_006851.2	NM_006851.2		11010	110825979	NM_006851.2	GLIPR1	NP_006842.2	ILMN_1769245	0006220746	S	681	GAGGGAATTACCCAACTTGGCCATATAAGAGAGGAGCCACCTGCAGTGCC	12	+	74170565-74170565:74175624-74175672	12q21.2a	Homo sapiens GLI pathogenesis-related 1 (GLIPR1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			RTVP1; CRISP7; GLIPR	RTVP1; CRISP7; GLIPR
Homo sapiens	RefSeq	NM_001388.3	ILMN_28249	DRG2	NM_001388.3	NM_001388.3		1819	34305455	NM_001388.3	DRG2	NP_001379.1	ILMN_1810531	0005960017	S	1653	CCAGTGGTTAGTGGCTTCAAAGGCCCAGCTGACACCCTCCACAGCCTAAG	17	+	17951782-17951831	17p11.2g	Homo sapiens developmentally regulated GTP binding protein 2 (DRG2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7929244] [evidence TAS]	Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 7929244] [evidence TAS]		
Homo sapiens	RefSeq	NM_001099666.1	ILMN_309674	PTAR1	NM_001099666.1	NM_001099666.1		375743	153792603	NM_001099666.1	PTAR1	NP_001093136.1	ILMN_3237679	0006110646	S	9811	GCCCTGGGATTCTAATCTTCCTCTGCAACTGTCTTCCAGGACTTACTGGC	9	-	72324628-72324677	9q21.11b	Homo sapiens protein prenyltransferase alpha subunit repeat containing 1 (PTAR1), mRNA.		The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]	Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein [goid 8318] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ45604	FLJ45604
Homo sapiens	RefSeq	XM_937053.1	ILMN_45777	LOC647998	XM_937053.1	XM_937053.1		647998	89026304	XM_937053.1	LOC647998	XP_942146.1	ILMN_1753736	0002370392	S	277	AGTGCTTTGGCACTTCTTCTCAGTCCAACCATTGAGCTGGTCATCATCAG					PREDICTED: Homo sapiens hypothetical protein LOC647998 (LOC647998), mRNA.					
Homo sapiens	RefSeq	NM_207341.2	ILMN_161961	ZP1	NM_207341.2	NM_207341.2		22917	66348147	NM_207341.2	ZP1	NP_997224.2	ILMN_1654473	0006250730	S	1682	ACGATCCTCAGGTCACCGTAATGACACTGCCAGGCCCCAGGACATCGTGA	11	+	60399185-60399234	11q12.2a	Homo sapiens zona pellucida glycoprotein 1 (sperm receptor) (ZP1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]		MGC87693	MGC87693
Homo sapiens	RefSeq	NM_153712.3	ILMN_14027	TTL	NM_153712.4	NM_153712.4		150465	109715847	NM_153712.4	TTL	NP_714923.1	ILMN_1764043	0007320386	S	4660	GTGTTTTCATTCACAGTGGAGGCTACATCAAGCAAGGGGAGGTCCAGCCC	2	+	113006190-113006239	2q13d	Homo sapiens tubulin tyrosine ligase (TTL), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins [goid 226] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; Any process that modulates the rate, direction or extent of axon extension [goid 30516] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MGC46235	MGC46235
Homo sapiens	RefSeq	NM_003755.2	ILMN_1534	EIF3G	NM_003755.3	NM_003755.3		8666	83281440	NM_003755.3	EIF3G	NP_003746.2	ILMN_1689446	0002190377	S	858	TCTCCCGCATCTACCTGGCTAAGGACAAGACCACTGGCCAATCCAAGGGC	19	-	10226258-10226261:10226360-10226405	19p13.2c	Homo sapiens eukaryotic translation initiation factor 3, subunit G (EIF3G), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; Any process that modulates the frequency, rate or extent of translational initiation [goid 6446] [pmid 9973622] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14688252] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	EIF3S4; EIF3-P42; eIF3-delta; eIF3-p44; eIF3g	EIF3-P42; eIF3-delta; eIF3-p44
Homo sapiens	Unigene	Hs.539174	ILMN_104352	HS.539174	Hs.539174		Hs.539174		5397369	AI810882			ILMN_1898004	0002030719	S	253	GAAGGAGACAAGCTGGCCCACGGGGAGGTCAATACCAATCAATGCGGACC	12	+	113619390-113619423:113619425-113619440		tu21c08.x1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:2251694 3, mRNA sequence					
Homo sapiens	RefSeq	XR_015773.2	ILMN_168766	LOC728693	XR_015773.2	XR_015773.2		728693	169204450	XR_015773.2	LOC728693		ILMN_3228108	0000050615	A	778	TCAACTCAAGCGCCAGCCTGCTCCACCCAGAGAAGCACACTTTGTGAGAG	12	-	115677635-115677684	12q24.22a	PREDICTED: Homo sapiens misc_RNA (LOC728693), miscRNA.					
Homo sapiens	RefSeq	NM_001005515.1	ILMN_6697	OR5H15	NM_001005515.1	NM_001005515.1		403274	53933283	NM_001005515.1	OR5H15	NP_001005515.1	ILMN_1680886	0006480369	S	758	GCCCCCTTCTCTTAATGTATGTGGGCCCTGCATCTCCGCAAGCAGATGGT	3	+	97888301-97888350	3q11.2c	Homo sapiens olfactory receptor, family 5, subfamily H, member 15 (OR5H15), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_001024609.1	ILMN_24386	LOC220416	NM_001024609.1	NM_001024609.1		220416	66912181	NM_001024609.1	LOC220416	NP_001019780.1	ILMN_1740449	0003440687	S	1136	TAGAAAGTGTCCCAAAGCAAATCCCACCAAGACCACCTGAAGGTCTCACC	13	+	45700828-45700869:45706328-45706335	13q14.12b	Homo sapiens similar to Leucine-rich repeat protein SHOC-2 (Ras-binding protein Sur-8) (LOC220416), mRNA.					
Homo sapiens	RefSeq	XM_294209.6	ILMN_40623	LOC340260	XM_294209.6	XM_294209.6		340260	89024762	XM_294209.6	LOC340260	XP_294209.6	ILMN_1800795	0006960097	S	1	ATGATGGACGGCCGCCTCCTGGAACACCCGCATGCCCAGTTCGGGGGCTC	7	+	1239180-1239229	7p22.3b	PREDICTED: Homo sapiens similar to Unc4.1 homeobox (LOC340260), mRNA.					
Homo sapiens	RefSeq	XM_001716386.1	ILMN_346554	LOC653794	XM_001716386.1	XM_001716386.1		653794	169166921	XM_001716386.1	LOC653794	XP_001716438.1	ILMN_3289037	0001500161	M	594	CAGTAGCACAATATCGACTCATTGCAACTTCCGCCTCCCGAGTTCAAGCG				4q32.3b	PREDICTED: Homo sapiens similar to Tripartite motif-containing 61 (LOC653794), mRNA.					
Homo sapiens	RefSeq	XM_938257.1	ILMN_41285	LOC649192	XM_938257.1	XM_938257.1		649192	89061484	XM_938257.1	LOC649192	XP_943350.1	ILMN_1697599	0004830097	S	575	CTGAGTCAAACAGATGGCAGGGGGACCAGGACTCGCAGCACGGCGGCCTT					PREDICTED: Homo sapiens similar to double homeobox 4c (LOC649192), mRNA.					
Homo sapiens	RefSeq	XR_042340.1	ILMN_351002	LOC100132942	XR_042340.1	XR_042340.1		100132942	169162869	XR_042340.1	LOC100132942		ILMN_3294197	0006940347	M	577	CTGAATGGGGAAGATGCTTCTGGCATAGGGTGGGTAGAGGCCACGGTTGC	1	+	14912612-14912661	1p36.21b	PREDICTED: Homo sapiens misc_RNA (LOC100132942), miscRNA.					
Homo sapiens	RefSeq	XM_941677.1	ILMN_34888	LOC652265	XM_941677.1	XM_941677.1		652265	88955122	XM_941677.1	LOC652265	XP_946770.1	ILMN_1730236	0000020523	S	232	GACAGTAGGATAAATGTGAACACTGCTAGCTGGATTCAGGCTTTTCAGGC					PREDICTED: Homo sapiens similar to Heterogeneous nuclear ribonucleoprotein A1 (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) (LOC652265), mRNA.					
Homo sapiens	RefSeq	NM_005166.3	ILMN_22183	APLP1	NM_005166.3	NM_005166.3		333	67782339	NM_005166.3	APLP1	NP_005157.1	ILMN_2396198	0003140431	A	1791	TGCGTCTGTTCCAAGGGGTTTCCCTTTCCACTCATCGGAGATTCAGAGGG	19	+	36369797-36369846	19q13.12a	Homo sapiens amyloid beta (A4) precursor-like protein 1 (APLP1), transcript variant 2, mRNA.	A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers [goid 5604] [pmid 9521588] [evidence TAS]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9521588] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 9521588] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]	Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14563850] [evidence IPI]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	APLP	APLP
Homo sapiens	RefSeq	NM_001123168.1	ILMN_356812	FAM72A	NM_001123168.1	NM_001123168.1		729533	178057344	NM_001123168.1	FAM72A	NP_001116640.1	ILMN_3238797	0004250546	S	1058	ACCTTTTTCTGCCCAGTGTAGGTGTATTCTTAAATTCAGACAGGGGAAGA	1	+	206154265-206154314	1q32.1g	Homo sapiens family with sequence similarity 72, member A (FAM72A), mRNA.					
Homo sapiens	RefSeq	XM_943167.1	ILMN_30885	KIAA1245	XM_943167.1	XM_943167.1		149013	88952384	XM_943167.1	KIAA1245	XP_948260.1	ILMN_1668016	0006020240	I	27	GCTCATCTGTCCGTCATGTTCCTGGTATGTTTTCTAGATAAATGGCTGAC					PREDICTED: Homo sapiens KIAA1245, transcript variant 16 (KIAA1245), mRNA.					
Homo sapiens	RefSeq	NM_014988.1	ILMN_3090	LIMCH1	NM_014988.1	NM_014988.1		22998	55741670	NM_014988.1	LIMCH1	NP_055803.1	ILMN_2139761	0001770754	S	4881	TCCTCAGCCACTGGAGGGATTTCGACCATATTTGTCATTTGGATGAGCTG	4	+	41395534-41395583	4p13d	Homo sapiens LIM and calponin homology domains 1 (LIMCH1), mRNA.		A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin. The myosin may be organized into filaments [goid 31032] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp686B2470; DKFZp781I1455; DKFZp781C1754; LMO7B; DKFZp686G18243; DKFZp686G2094; MGC72127; DKFZp434I0312; DKFZp686A01247; LIMCH1A	DKFZp686B2470; DKFZp781I1455; DKFZp781C1754; LMO7B; DKFZp686G18243; DKFZp686G2094; MGC72127; DKFZp434I0312; DKFZp686A01247; LIMCH1A
Homo sapiens	RefSeq	XM_940902.1	ILMN_42234	LOC651695	XM_940902.1	XM_940902.1		651695	88948819	XM_940902.1	LOC651695	XP_945995.1	ILMN_1781754	0006040594	S	690	GGGGGACGTGGTAAAAGTACTCAGCAAGATCAAGAAGCTGGTCCCACGGA					PREDICTED: Homo sapiens similar to CD2-associated protein (LOC651695), mRNA.					
Homo sapiens	RefSeq	NM_207108.1	ILMN_29858	ASTN1	NM_207108.1	NM_207108.1		460	46488920	NM_207108.1	ASTN1	NP_996991.1	ILMN_1702189	0002710736	A	3640	CCCCATGCCCCGTGGTGGATGATGTCAAGGCTCAAGAAATAGCAGACAAG	1	-	176838149-176838163:176845673-176845707	1q25.2a	Homo sapiens astrotactin 1 (ASTN1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a neuron to another cell via adhesion molecules [goid 7158] [evidence NAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	ASTN; KIAA1747	ASTN; KIAA1747
Homo sapiens	RefSeq	XM_001713895.1	ILMN_349761	LOC100133714	XM_001713895.1	XM_001713895.1		100133714	169171857	XM_001713895.1	LOC100133714	XP_001713947.1	ILMN_3247291	0007510152	S	42	CGCGTCCGTTACTACAGTGACACCAGGCTCAACAGTAAACACCAGTATTG					PREDICTED: Homo sapiens similar to mucin 11 (LOC100133714), partial mRNA.					
Homo sapiens	RefSeq	NM_006773.3	ILMN_22238	DDX18	NM_006773.3	NM_006773.3		8886	38327633	NM_006773.3	DDX18	NP_006764.3	ILMN_1756220	0006060201	S	3440	GGACTTCCAACCTTGACTGCTGAGCTCCTGGCTTAGCTTCTTGGGTTCCT	2	+	118306098-118306147	2q14.1d	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 (DDX18), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate, driving the unwinding of an RNA helix [goid 4004] [pmid 8861962] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ33908; MrDb	FLJ33908; MrDb
Homo sapiens	RefSeq	XM_940201.1	ILMN_44297	LOC651079	XM_940201.1	XM_940201.1		651079	89061851	XM_940201.1	LOC651079	XP_945294.1	ILMN_1684372	0000520095	S	61	TCCTGTGCGCGCCACGTCTACTTTTCTCTCCCCTATTCCACACATCCGTC					PREDICTED: Homo sapiens similar to coiled-coil domain containing 5 (spindle associated) (LOC651079), mRNA.					
Homo sapiens	RefSeq	NM_000208.1	ILMN_18882	INSR	NM_000208.2	NM_000208.2		3643	119395735	NM_000208.2	INSR	NP_000199.2	ILMN_1670918	0006650440	S	4271	TGGCGGGGGCGGGCAGGGGTTCCCATTTTCGCTTTCCTCTGGTTTGAAAG	19	-	7125627-7125676	19p13.2e	Homo sapiens insulin receptor (INSR), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 8452530] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2986535] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9092559] [evidence IDA]; A small pit, depression, or invagination, such as any of the minute pits or incuppings of the cell membrane formed during pinocytosis, that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane. Such caveolae may be pinched off to form free vesicles within the cytoplasm [goid 5901] [pmid 15182363] [evidence IDA]; The lipid bilayer surrounding an endosome [goid 10008] [pmid 2986535] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 17001305] [evidence IMP]; The developmental process by which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 3007] [pmid 7693131] [evidence IMP]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9092559] [evidence IDA]; The series of molecular signals generated as a consequence of the insulin receptor binding to insulin [goid 8286] [pmid 8440175] [evidence IDA]; Any virus-induced change in the morphological, biochemical, or growth parameters of a cell [goid 19087] [pmid 17001305] [evidence IMP]; The specification of male sex of an individual organism [goid 30238] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell migration [goid 30335] [pmid 12138094] [evidence IMP]; Any process that modulates the DNA-dependent transcription of a specific gene or genes [goid 32583] [pmid 12881524] [evidence IMP]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [pmid 7693131] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide [goid 45429] [pmid 10747347] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of DNA replication [goid 45740] [pmid 12138094] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of glycolysis [goid 45821] [pmid 7693131] [evidence IMP]; Any process that modulates the frequency, rate or extent of embryonic development [goid 45995] [pmid 7693131] [evidence IMP]; The phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein [goid 46777] [pmid 7537849] [evidence IMP]; Any process that activates, maintains or increases the rate of developmental growth [goid 48639] [pmid 7693131] [evidence IMP]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated nonidentical subunits [goid 51290] [pmid 1898103] [evidence IDA]; Any process that increases the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 60267] [pmid 9092559] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA];  [goid 4716] [pmid 6849137] [evidence IDA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with insulin to initiate a change in cell activity [goid 5009] [pmid 8440175] [evidence IDA]; Interacting selectively with the insulin-like growth factor receptor [goid 5159] [pmid 8452530] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 9092559] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with insulin-like growth factor I [goid 31994] [pmid 8452530] [evidence IPI]; Interacting selectively with insulin-like growth factor II [goid 31995] [pmid 12138094] [evidence IPI]; Interacting selectively with a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class [goid 42169] [pmid 8276809] [evidence IPI]; Interacting selectively with a phosphoinositide 3-kinase, any enzyme that catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring [goid 43548] [pmid 8276809] [evidence IPI]; Interacting selectively with a phosphoinositide 3-kinase, any enzyme that catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring [goid 43548] [pmid 7537849] [evidence IPI]; Interacting selectively with insulin, a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 43559] [pmid 8440175] [evidence IDA]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [pmid 7559478] [evidence IPI]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [pmid 7537849] [evidence IPI]; Interacting selectively with a phosphotyrosine-binding (PTB) domain of a protein [goid 51425] [pmid 7559478] [evidence IPI]	CD220; HHF5	CD220
Homo sapiens	RefSeq	NM_020196.2	ILMN_30213	XAB2	NM_020196.2	NM_020196.2		56949	55770905	NM_020196.2	XAB2	NP_064581.2	ILMN_1771057	0005490671	S	2545	AGCAGCAGAGCGTGCCAGCCGCAGTGTTTGGGAGCCTGAAGGAAGACTGA	19	-	7684471-7684471:7684472-7684520	19p13.2e	Homo sapiens XPA binding protein 2 (XAB2), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10944529] [evidence IC ]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	The process whose specific outcome is the progression of the blastocyst over time, from its formation to the mature structure. The mammalian blastocyst is a hollow ball of cells containing two cell types, the inner cell mass and the trophectoderm [goid 1824] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [pmid 10944529] [evidence IDA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 10944529] [evidence IDA]; Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10944529] [evidence IPI]	NTC90; SYF1; HCRN; HCNP; DKFZp762C1015	NTC90; SYF1; HCRN; HCNP; DKFZp762C1015
Homo sapiens	RefSeq	XM_929347.1	ILMN_42458	LOC654163	XM_940222.1	XM_940222.1		654163	88971109	XM_940222.1	LOC654163	XP_945315.1	ILMN_1737141	0000430377	S	3	GGCGGCGCTCTACGCCTGCACCAAGTGCCACCAGCGTTTCCCCTTCCAGG					PREDICTED: Homo sapiens similar to family with sequence similarity 76, member A (LOC654163), mRNA.					
Homo sapiens	RefSeq	NM_001002031.1	ILMN_518	ATP5G2	NM_001002031.2	NM_001002031.2		517	85794864	NM_001002031.2	ATP5G2	NP_001002031.1	ILMN_1807798	0002320762	I	245	CTTCCTCCTGCTGCATTTTAGGCACTGAACCCCAATCCCGACCGTATGTT	12	-	54070218-54070267	12q13.13f	Homo sapiens ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) (ATP5G2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A proton-transporting ATP synthase complex found in the mitochondrial membrane [goid 5753] [pmid 8328972] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible [goid 16469] [evidence IEA]; Either of the lipid bilayers that surround the mitochondrion and form the mitochondrial envelope [goid 31966] [evidence IEA]; All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins [goid 45263] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis [goid 15986] [evidence IEA]; The directed movement of protons (hydrogen ions) into, out of, within or between cells [goid 15992] [evidence IEA]; The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator [goid 46034] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8328972] [evidence NAS]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ADP + phosphate = ATP + H2O, coupled with transport of H+ down a concentration gradient, by a rotational mechanism [goid 46933] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism [goid 46961] [evidence IEA]		
Homo sapiens	RefSeq	NR_031643.1	ILMN_388718	MIR548F2	NR_031643.1	NR_031643.1		100313771	269847243	NR_031643.1	MIR548F2		ILMN_3309794	0004070592	S	11	AGGTTGGTGCGAACATAATTGCAGTTTTTATCATTACTTTTAATGGCAAA					Homo sapiens microRNA 548f-2 (MIR548F2), microRNA.					
Homo sapiens	RefSeq	XR_018596.2	ILMN_170537	LOC646841	XR_018596.2	XR_018596.2		646841	169171943	XR_018596.2	LOC646841		ILMN_3275033	0001260553	M	93	GTGTGTCCATGGAGTGGGATTCAAGAAGCGTGCCCCTCGGGAACTCAGAG				7q31.33b	PREDICTED: Homo sapiens similar to hCG2040273 (LOC646841), mRNA.					
Homo sapiens	RefSeq	NM_174930.2	ILMN_4052	PMS2L5	NM_174930.2	NM_174930.2		5383	31341385	NM_174930.2	PMS2L5	NP_777590.1	ILMN_2083333	0000150575	S	43	CCGGTGTTGCATCCTTGGAGAGAGCTGAGAGCTGGAGTACAGAACCTGCT	7	+	73944868-73944901:73948169-73948184	7q11.23c	Homo sapiens postmeiotic segregation increased 2-like 5 (PMS2L5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 7980603] [evidence NAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [pmid 7980603] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	MGC34222; PMS7	MGC34222; PMS7
Homo sapiens	RefSeq	NM_174930.2	ILMN_4052	PMS2L5	NM_174930.2	NM_174930.2		5383	31341385	NM_174930.2	PMS2L5	NP_777590.1	ILMN_2083334	0001400519	S	291	AACTTCGAAGGCTTAATGATGTCACCATTTCTACCTGCCACGTATCGGCG	7	+	73950273-73950285:73951704-73951740	7q11.23c	Homo sapiens postmeiotic segregation increased 2-like 5 (PMS2L5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 7980603] [evidence NAS]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]	Interacting selectively with damaged DNA [goid 3684] [pmid 7980603] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	MGC34222; PMS7	MGC34222; PMS7
Homo sapiens	RefSeq	NR_031637.1	ILMN_388564	MIR1302-8	NR_031637.1	NR_031637.1		100302223	269847221	NR_031637.1	MIR1302-8		ILMN_3308703	0002690286	S	26	ACACCGTAATTTTCAGCATTAGTGTATCACATGCAGTATTTGGGACATAC					Homo sapiens microRNA 1302-8 (MIR1302-8), microRNA.					
Homo sapiens	RefSeq	XM_926511.1	ILMN_39430	LOC643138	XM_926511.1	XM_926511.1		643138	89033964	XM_926511.1	LOC643138	XP_931604.1	ILMN_1802459	0001940451	S	92	GAGAGGACACTGAAGAGGACCTGCAGGCTGCAAGGAGCAACAGAGATGGA	11	-	56260367-56260416		PREDICTED: Homo sapiens similar to Guanine nucleotide-binding protein G(s), alpha subunit (Adenylate cyclase-stimulating G alpha protein) (G-alpha-8) (LOC643138), mRNA.					
Homo sapiens	RefSeq	NM_006658.2	ILMN_162125	C7ORF16	NM_006658.2	NM_006658.2		10842	31542288	NM_006658.2	C7orf16	NP_006649.1	ILMN_1737819	0003610180	S	1517	TGGATGCCCAGGGGAAGGCATACAGGCCTCATCCACCAGGCAATAGACAG	7	+	31714361-31714410	7p15.1a	Homo sapiens chromosome 7 open reading frame 16 (C7orf16), mRNA.				GSBS	GSBS
Homo sapiens	RefSeq	NM_138802.1	ILMN_15433	ZFAND2B	NM_138802.1	NM_138802.1		130617	20270356	NM_138802.1	ZFAND2B	NP_620157.1	ILMN_1653718	0000060403	S	1168	GCCAGGCCCTACTCTTAGCCCCTTCATCATGTCATCTCCCTTATGCTGGA	2	+	219782494-219782543	2q35f	Homo sapiens zinc finger, AN1-type domain 2B (ZFAND2B), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_025203.1	ILMN_12339	C2ORF44	NM_025203.1	NM_025203.1		80304	13376797	NM_025203.1	C2orf44	NP_079479.1	ILMN_1730631	0006100154	S	3613	GACTGAGAACAGTCTGAGGCCTGGCTCCACTTGGAAGTATCTGGGGTGCG	2	-	24105868-24105917	2p23.3d	Homo sapiens chromosome 2 open reading frame 44 (C2orf44), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12029088] [evidence IPI]	FLJ21945; PP384	PP384; FLJ21945
Homo sapiens	RefSeq	NM_173810.3	ILMN_5250	TTC9C	NM_173810.3	NM_173810.3		283237	34222234	NM_173810.3	TTC9C	NP_776171.1	ILMN_2183389	0003400349	S	721	TTTTTCCATCTGCAGGACTATGACCAGGCCCGCCACTACCTCCTGGCTGC	11	+	62259543-62259592	11q12.3b	Homo sapiens tetratricopeptide repeat domain 9C (TTC9C), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC29649	MGC29649
Homo sapiens	RefSeq	NM_173810.3	ILMN_5250	TTC9C	NM_173810.3	NM_173810.3		283237	34222234	NM_173810.3	TTC9C	NP_776171.1	ILMN_1685676	0003830682	S	624	GGAGCCCGTGAACTACGAACGAGTGAGAGAATATAGTCAGAAAGTCCTGG	11	+	62259446-62259495	11q12.3b	Homo sapiens tetratricopeptide repeat domain 9C (TTC9C), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	MGC29649	MGC29649
Homo sapiens	RefSeq	NM_001004492.1	ILMN_21348	OR2B11	NM_001004492.1	NM_001004492.1		127623	52317191	NM_001004492.1	OR2B11	NP_001004492.1	ILMN_1799282	0004150440	S	782	ACATGTATCTGCAGCCCCCTTCCAGCTACTCCCAAGAGCAGGGCAAATTT	1	-	247614453-247614502	1q44e	Homo sapiens olfactory receptor, family 2, subfamily B, member 11 (OR2B11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_018126.1	ILMN_2286	TMEM33	NM_018126.1	NM_018126.1		55161	8922490	NM_018126.1	TMEM33	NP_060596.1	ILMN_1760620	0006650382	S	2551	GTCCACTAAGCTGGAGAAGCAGCCTCATACAGTTGATTTTGTGTATGTGG	4	+	41652447-41652496	4p13d	Homo sapiens transmembrane protein 33 (TMEM33), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [pmid 17081065] [evidence IDA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	SHINC3; FLJ10525; 1600019D15Rik	SHINC3; FLJ10525; 1600019D15Rik
Homo sapiens	RefSeq	NM_006847.2	ILMN_20705	LILRB4	NM_006847.2	NM_006847.2		11006	21314640	NM_006847.2	LILRB4	NP_006838.2	ILMN_1778974	0002810259	S	2925	CCTTCTTCCTCCCAGGAAAGGGGACGTTCAGCTGAGCCGAGTGTGTATAC	19	+	59872826-59872875	19q13.42a-q13.42b	Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4 (LILRB4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9548455] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9151699] [evidence TAS]	Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 9151699] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9151699] [evidence TAS]	CD85K; HM18; LIR-5; ILT3; LILRB5; LIR5	CD85K; HM18; LIR-5; ILT3; LILRB5; LIR5
Homo sapiens	RefSeq	NM_198468.1	ILMN_10450	C6ORF167	NM_198468.2	NM_198468.2		253714	115583682	NM_198468.2	C6orf167	NP_940870.2	ILMN_1783075	0005550195	S	3876	TCAGAGCAGAAATGGGGCCTTGGCAGGAATATAGCACAAAGGGAAGCCTA	6	-	97720894-97720938:97722668-97722672	6q16.1f-q16.1g	Homo sapiens chromosome 6 open reading frame 167 (C6orf167), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ46180; dJ39B17.2; KIAA1900; DKFZp686C20164; DKFZp781C2113	FLJ46180; dJ39B17.2; KIAA1900; DKFZp686C20164; DKFZp781C2113
Homo sapiens	RefSeq	NM_198468.2	ILMN_10450	C6ORF167	NM_198468.2	NM_198468.2		253714	115583682	NM_198468.2	C6orf167	NP_940870.2	ILMN_3251274	0003710132	S	6522	CCTGGAACCAGTCCCCAGACCAAAAATGACCACTGTATCTTGAGAGCACC	6	-	97700214-97700263	6q16.1f-q16.1g	Homo sapiens chromosome 6 open reading frame 167 (C6orf167), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ46180; dJ39B17.2; KIAA1900; DKFZp686C20164; DKFZp781C2113	FLJ46180; dJ39B17.2; KIAA1900; DKFZp686C20164; DKFZp781C2113
Homo sapiens	RefSeq	XM_940826.3	ILMN_43799	LOC257039	XM_940826.3	XM_940826.3		257039	169166098	XM_940826.3	LOC257039	XP_945919.2	ILMN_3292834	0002480392	M	501	CAGAGACAATTATGTTCCCGAGATCTCAGTCCTGGATCAGGAGACCGTTG				3q24a	PREDICTED: Homo sapiens similar to hCG2040268 (LOC257039), mRNA.					
Homo sapiens	RefSeq	XM_001714322.1	ILMN_341532	LOC100128405	XM_001714322.1	XM_001714322.1		100128405	169169486	XM_001714322.1	LOC100128405	XP_001714374.1	ILMN_3184148	0005340176	A	1020	AGAATAACGGGAAGGTGCAACAAGATCGCTTCCCTAGAGGCGCGTCGCCC	6	+	163754466-163754515	6q26c	PREDICTED: Homo sapiens hypothetical protein LOC100128405 (LOC100128405), mRNA.					
Homo sapiens	RefSeq	XM_001714322.1	ILMN_341532	LOC100128405	XM_001714322.1	XM_001714322.1		100128405	169169486	XM_001714322.1	LOC100128405	XP_001714374.1	ILMN_3232048	0007150315	I	1581	AGCGCAGTCGGAGCGCGGCGGCAGCGGCAGAGGCGCCGCGGCGGGGACCA	6	+	163755737-163755786	6q26c	PREDICTED: Homo sapiens hypothetical protein LOC100128405 (LOC100128405), mRNA.					
Homo sapiens	RefSeq	XM_001714091.1	ILMN_348211	LOC100130262	XM_001714091.1	XM_001714091.1		100130262	169161001	XM_001714091.1	LOC100130262	XP_001714143.1	ILMN_3268329	0003800414	M	1785	GCAGCAGGGTCAGAGGTTGTCCCCAAGGGGTGCGGGAAGCGCCGGCCGCA				1q44f	PREDICTED: Homo sapiens hypothetical protein LOC100130262 (LOC100130262), mRNA.					
Homo sapiens	RefSeq	XM_001714091.1	ILMN_348211	LOC100130262	XM_001714091.1	XM_001714091.1		100130262	169161001	XM_001714091.1	LOC100130262	XP_001714143.1	ILMN_3191861	0000050484	A	104	TGCTGGTGGCTCCCATGATTTGGAAATAACCTCATGTTCCACTTGGCAGT				1q44f	PREDICTED: Homo sapiens hypothetical protein LOC100130262 (LOC100130262), mRNA.					
Homo sapiens	RefSeq	XM_944706.1	ILMN_4715	DCAF15	NM_138353.2	NM_138353.2		90379	78486539	NM_138353.2	DCAF15	NP_612362.2	ILMN_1733859	0002750722	A	1513	ACTGAGGAGGGCCAGCTCCGACCAAAGACCTATCACACCAGCCTCAAGGT	19	+	13931862-13931881:13932099-13932128	19p13.12c	Homo sapiens DDB1 and CUL4 associated factor 15 (DCAF15), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		MGC99481	
Homo sapiens	RefSeq	NM_138353.2	ILMN_4715	DCAF15	NM_138353.2	NM_138353.2		90379	78486539	NM_138353.2	DCAF15	NP_612362.2	ILMN_2192620	0001230438	S	1950	AGGGCAGCCTCTGTTGGCCTGAGGGTCTGGACGCTTTTTATTTATGCCTA	19	+	13932948-13932997	19p13.12c	Homo sapiens DDB1 and CUL4 associated factor 15 (DCAF15), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		MGC99481	MGC99481
Homo sapiens	Unigene	Hs.542962	ILMN_106652	HS.542962	Hs.542962		Hs.542962		18990161	BM680265			ILMN_1916504	0004390035	S	692	GTCCTTGGAGTGCTCTGGATGGTGCCGTTTGTGGCTGATCCTGTCATGGC	3	-	136464825-136464829:136464832-136464836:136464839-136464853:136464856-136464867:136464870-136464882		UI-E-EO1-aiy-c-16-0-UI.s1 UI-E-EO1 Homo sapiens cDNA clone UI-E-EO1-aiy-c-16-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_941084.1	ILMN_39745	LOC651830	XM_941084.1	XM_941084.1		651830	89039158	XM_941084.1	LOC651830	XP_946177.1	ILMN_1700891	0002340615	S	87	GCCAGGGCCTGAGGAAACTCGTTGCCCTGAAGAGAAAGACAAGCCTGGCT					PREDICTED: Homo sapiens similar to Dynamin-1 (D100) (Dynamin, brain) (B-dynamin) (LOC651830), mRNA.					
Homo sapiens	RefSeq	XM_001718563.1	ILMN_340476	LOC643336	XM_001718563.1	XM_001718563.1		643336	169171726	XM_001718563.1	LOC643336	XP_001718615.1	ILMN_3282321	0001710594	M	472	CTATCACTCCAGAGCCTGCTGAAAAGCTGGTCCGTGACCTGAAGGCTGTC				7p11.2b	PREDICTED: Homo sapiens similar to hCG1985303 (LOC643336), mRNA.					
Homo sapiens	RefSeq	XM_001720682.1	ILMN_346706	LOC100133099	XM_001720682.1	XM_001720682.1		100133099	169172873	XM_001720682.1	LOC100133099	XP_001720734.1	ILMN_3244982	0006060309	S	818	AAGTCCTGCCCAGACCTGCGGTCCCATCAGTCAACTCTGTTTCGGAGACG	8	-	7668623-7668672	8p23.1e	PREDICTED: Homo sapiens hypothetical protein LOC100133099 (LOC100133099), mRNA.					
Homo sapiens	RefSeq	XM_001718519.1	ILMN_346694	LOC100129566	XM_001718519.1	XM_001718519.1		100129566	169168211	XM_001718519.1	LOC100129566	XP_001718571.1	ILMN_3266471	0005700367	M	177	ACGGCTGCATTTCAACAAGGAAAGATACCTCCTGCTCCATTCTCTGCTCC				5q13.3d	PREDICTED: Homo sapiens hypothetical protein LOC100129566 (LOC100129566), mRNA.					
Homo sapiens	RefSeq	NM_014694.2	ILMN_697	ADAMTSL2	NM_014694.2	NM_014694.2		9719	41281449	NM_014694.2	ADAMTSL2	NP_055509.2	ILMN_1721495	0004810575	S	3656	CTCGGCCCCCGCCCCTGCAGTCAGCGTCAGTGCTCATCTACGTTAATAAA	9	+	135430392-135430441	9q34.2a	Homo sapiens ADAMTS-like 2 (ADAMTSL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	FLJ45164; KIAA0605	FLJ45164; KIAA0605
Homo sapiens	Unigene	Hs.411472	ILMN_90256	HS.411472	Hs.411472		Hs.411472		34530558	AK124698			ILMN_1895690	0004120156	S	3903	CGTGTGCAAACTGATATGTATATAACTCCTGAGGCGACAGAAGTGCCCGG	16	-	9754841-9754890		Homo sapiens cDNA FLJ42708 fis, clone BRAMY3007311					
Homo sapiens	RefSeq	NM_153215.1	ILMN_27406	C3ORF45	NM_153215.1	NM_153215.1		132228	23397472	NM_153215.1	C3orf45	NP_694947.1	ILMN_1775136	0001440152	S	954	AAGACTGCCTTGGAGGGCAAAGGTGACATCGTGGAAGACCAGTTGGGCCC	3	+	50300069-50300118	3p21.31b	Homo sapiens chromosome 3 open reading frame 45 (C3orf45), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ38608	FLJ38608
Homo sapiens	RefSeq	NM_021804.1	ILMN_26080	ACE2	NM_021804.1	NM_021804.1		59272	11225608	NM_021804.1	ACE2	NP_068576.1	ILMN_1667018	0007100468	S	3161	ACATCTCCCTGACAACACAAAACTAGAGCCAGGGGCCTCCGTGAACTCCC	X	-	15489259-15489308	Xp22.2	Homo sapiens angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 (ACE2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10969042] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 18258853] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 18343844] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions [goid 45121] [pmid 18279660] [evidence TAS]	Any process that modulates the frequency, rate, or extent of production of a cytokine [goid 1817] [pmid 15380922] [evidence IC ]; The chemical reactions and pathways resulting in the breakdown of angiotensin in the blood [goid 2005] [pmid 10924499] [evidence IC ]; The drinking behavior that is mediated by the action of angiotensin in the brain. Angiotensin stimulates the brain centers that control thirst [goid 3051] [pmid 18258853] [evidence IMP]; The process by which renin-angiotensin modulates the force with which blood passes through the circulatory system [goid 3081] [pmid 18258853] [evidence IMP]; The process by which renin-angiotensin modulates the force with which blood passes through the circulatory system [goid 3081] [pmid 10924499] [evidence IC ]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH) [goid 6800] [pmid 15380922] [evidence IC ]; Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels [goid 19229] [pmid 15380922] [evidence IC ]; The chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 32800] [pmid 18258853] [evidence IMP]; Any process that modulates the frequency, rate or extent of cell proliferation [goid 42127] [pmid 17703127] [evidence TAS]; Any process that modulates the frequency, rate or extent of increases in the diameter of blood vessels [goid 42312] [pmid 15380922] [evidence IC ]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The process by which a virion enters a host cell, including virion attachment and penetration [goid 46718] [pmid 15165741] [evidence TAS]; The process during virion attachment where a virion binds to a host cell receptor, resulting in a conformational change of the virus protein [goid 46813] [pmid 18343844] [evidence IDA]; Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents [goid 50727] [pmid 15380922] [evidence IC ]	Combining with a virus component to initiate a change in cell activity [goid 1618] [pmid 18343844] [evidence IDA]; Interacting selectively with a glycoprotein, a protein that contains covalently bound glycose (monosaccharide) residues. These also include proteoglycans [goid 1948] [pmid 18343844] [evidence IPI]; Catalysis of the hydrolysis of the terminal or penultimate peptide bond at the C-terminal end of a peptide or polypeptide [goid 4180] [pmid 10969042] [evidence IDA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [pmid 10924499] [evidence IDA]; Catalysis of the release of C-terminal dipeptides from a polypeptide chain [goid 8241] [pmid 10924499] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP434A014; ACEH	DKFZP434A014; ACEH
Homo sapiens	RefSeq	XM_929748.1	ILMN_35569	LOC646793	XM_929748.1	XM_929748.1		646793	88953686	XM_929748.1	LOC646793	XP_934841.1	ILMN_1778139	0006960554	S	174	CCTCTTGCCCAACTCTAACACATTCATGGAGTTTGCCTGTCAGCAATGTG	2	-	131668151-131668200		PREDICTED: Homo sapiens similar to neurofibromin (LOC646793), mRNA.					
Homo sapiens	RefSeq	NR_029632.1	ILMN_388257	MIR218-2	NR_029632.1	NR_029632.1		407001	262206330	NR_029632.1	MIR218-2		ILMN_3310376	0004900673	S	11	GCGGGGCTTTCCTTTGTGCTTGATCTAACCATGTGGTGGAACGATGGAAA				5q35.1a	Homo sapiens microRNA 218-2 (MIR218-2), microRNA.					
Homo sapiens	RefSeq	XM_293354.7	ILMN_44168	WDR42C	XM_942624.2	XM_942624.2		347442	113430339	XM_942624.2	WDR42C	XP_947717.2	ILMN_1812355	0004060128	A	1668	CCATGGCAGCCTGTTTGACCAGTACATGCTTTGGTTCCTCCTGCGTCACG				Xp21.3b	PREDICTED: Homo sapiens WD repeat domain 42C (WDR42C), mRNA.					
Homo sapiens	RefSeq	XM_934219.1	ILMN_162815	LOC653234	XR_016668.1	XR_016668.1		653234	113421439	XR_016668.1	LOC653234		ILMN_1804337	0004810164	A	2377	CACCTAAAGAAGAAAAGCACCAACAACTTTATGATTGTGTCTGCCACTGG	10	+	45514828-45514877	10q11.21d	PREDICTED: Homo sapiens similar to centaurin, gamma-like family, member 1 (LOC653234), mRNA.					
Homo sapiens	RefSeq	NM_133446.1	ILMN_162815	LOC653234	XR_016668.1	XR_016668.1		653234	113421439	XR_016668.1	LOC653234		ILMN_1734553	0005420059	S	1353	AGGACCTCCACATGCACCACGTTCGTGACCGGGAGATGCCTGAAGCTTTG	10	+	45494450-45494494:45494864-45494868	10q11.21d	PREDICTED: Homo sapiens similar to centaurin, gamma-like family, member 1 (LOC653234), mRNA.					MRIP2
Homo sapiens	RefSeq	NM_152603.2	ILMN_25574	ZNF567	NM_152603.2	NM_152603.2		163081	34303940	NM_152603.2	ZNF567	NP_689816.2	ILMN_1687544	0001780376	S	1450	GTGGAAAGTCCTTCCGCCAGAAGACAACCCTTGTAGCACATCAGAGAACA	19	+	37210987-37211036	19q13.12b	Homo sapiens zinc finger protein 567 (ZNF567), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC45586	MGC45586
Homo sapiens	RefSeq	NM_152603.2	ILMN_25574	ZNF567	NM_152603.2	NM_152603.2		163081	34303940	NM_152603.2	ZNF567	NP_689816.2	ILMN_2096737	0006350259	S	2558	ATTATTGCATGTGGCAGTAGTGTATTTTCATTTTGCATACTATTCCATTT	19	+	37212095-37212144	19q13.12b	Homo sapiens zinc finger protein 567 (ZNF567), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC45586	MGC45586
Homo sapiens	RefSeq	NM_001012708.1	ILMN_2219	KRTAP5-3	NM_001012708.2	NM_001012708.2		387266	122891868	NM_001012708.2	KRTAP5-3	NP_001012726.1	ILMN_1701525	0006480564	S	794	GAGGCTCTGCCCACAAACCTCAGTGGGTCCTACAGATCCGGGCTCTCCAG	11	-	1628850-1628898:1628899-1628899	11p15.5b	Homo sapiens keratin associated protein 5-3 (KRTAP5-3), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]		Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with an iron-sulfur cluster, a combination of iron and sulfur atoms [goid 51536] [evidence IEA]	KRTAP5.3; KRTAP5-9	KRTAP5.3; KRTAP5-9
Homo sapiens	RefSeq	XM_927613.1	ILMN_138899	LOC644484	XM_927613.1	XM_927613.1		644484	88974665	XM_927613.1	LOC644484	XP_932706.1	ILMN_1790816	0005490162	S	198	ACCTTGTGGCAGCCTTCCTGCTCAGATGGGCCCCGGTGAAAACACGGGTG	4	-	61976281-61976330	4q13.1c	PREDICTED: Homo sapiens hypothetical protein LOC644484 (LOC644484), mRNA.					
Homo sapiens	RefSeq	NM_017558.2	ILMN_3739	HYDIN	NM_017558.2	NM_017558.2		54768	46361982	NM_017558.2	HYDIN	NP_060028.2	ILMN_2286379	0001070307	I	3526	CGACACTCTGGGCTGCCTCTCCTATTCAGGTATTGGGACATCCCTGTTCC	16	-	71061094-71061143	16q22.1f-q22.3a	Homo sapiens hydrocephalus inducing homolog (mouse) (HYDIN), transcript variant 2, mRNA.				FLJ14665; KIAA1864; FLJ12871; HYDIN1; DKFZp434D0513; DKFZp434L0850	FLJ14665; KIAA1864; FLJ12871; HYDIN1; DKFZp434D0513; DKFZp434L0850
Homo sapiens	RefSeq	NM_000170.1	ILMN_169859	GLDC	NM_000170.2	NM_000170.2		2731	108773800	NM_000170.2	GLDC	NP_000161.2	ILMN_1806754	0004210397	S	3451	GCTTTGGTATTCTGCTTCCACATGTGCCAGTTGCCTGGATTGGGAGCCAT	9	-	6582987-6582990:6585014-6585059	9p24.1b	Homo sapiens glycine dehydrogenase (decarboxylating) (GLDC), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid [goid 6546] [pmid 1996985] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 [goid 4375] [pmid 1996985] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 2268343] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	MGC138198; GCSP; NKH; GCE; MGC138200; HYGN1	MGC138198; GCSP; NKH; GCE; MGC138200; HYGN1
Homo sapiens	RefSeq	XR_019067.2	ILMN_168475	LOC347281	XR_019067.2	XR_019067.2		347281	169179123	XR_019067.2	LOC347281		ILMN_3277499	0000670327	M	2138	GCATGCCCATGGCAATGAATCAGACTGTGGGAGGCCATCTTCAACCACAG				9q31.1d	PREDICTED: Homo sapiens misc_RNA (LOC347281), miscRNA.					
Homo sapiens	RefSeq	NR_029598.1	ILMN_388146	MIR30C2	NR_029598.1	NR_029598.1		407032	262206165	NR_029598.1	MIR30C2		ILMN_3310509	0005360161	S	11	ACATCCTACACTCTCAGCTGTGGAAAGTAAGAAAGCTGGGAGAAGGCTGT				6q13b	Homo sapiens microRNA 30c-2 (MIR30C2), microRNA.					
Homo sapiens	RefSeq	NM_152880.2	ILMN_11421	PTK7	NM_152880.2	NM_152880.2		5754	27886605	NM_152880.2	PTK7	NP_690619.1	ILMN_2353202	0006510050	A	3989	GGTGGGCCCTGGAGATGAGGAGGGTGGGCCATCCTTACCCCACACTTTTA	6	+	43129317-43129366	6p21.1d	Homo sapiens PTK7 protein tyrosine kinase 7 (PTK7), transcript variant PTK7-2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7478540] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The last step in the formation of the neural tube, where the paired neural folds are brought together and fuse at the dorsal midline [goid 1843] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7478540] [evidence TAS]; The specification and formation of the apicobasal polarity of an epithelial cell [goid 45198] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 8882711] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	CCK4	CCK4
Homo sapiens	RefSeq	NM_001005270.1	ILMN_18993	OR4C12	NM_001005270.1	NM_001005270.1		283093	52627206	NM_001005270.1	OR4C12	NP_001005270.1	ILMN_1777706	0003780360	S	416	GCATTCTCCTGGTGGCAGTGGCCTGGGTGGGAGGATTTCTTCATGCAACT	11	-	50003572-50003621	11p11.12c	Homo sapiens olfactory receptor, family 4, subfamily C, member 12 (OR4C12), mRNA.	Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-259	OR11-259
Homo sapiens	RefSeq	NM_002078.3	ILMN_177245	GOLGA4	NM_002078.3	NM_002078.3		2803	45359854	NM_002078.3	GOLGA4	NP_002069.2	ILMN_1776297	0002940070	S	7132	GGGCCCCTCATGTAGCCAAAAGACCAAGAAAAATCTGGCCCACAGATAAG	3	+	37344091-37344140	3p22.2b	Homo sapiens golgi autoantigen, golgin subfamily a, 4 (GOLGA4), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 1400343] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 8626529] [evidence TAS]		GCP2; MU-RMS-40.18; GOLG; p230	GCP2; MU-RMS-40.18; GOLG; p230
Homo sapiens	RefSeq	XM_001714730.1	ILMN_334260	KIAA0194	XM_001714730.1	XM_001714730.1		22993	169168358	XM_001714730.1	KIAA0194	XP_001714782.1	ILMN_3250585	0002850743	M	5435	AGGAAACAGCAGGACTGGCTCAAGTGCCCAAGGTTTGTTTAGGGCCTGGG				5q33.1c	PREDICTED: Homo sapiens KIAA0194 protein (KIAA0194), mRNA.		Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	XM_371798.4	ILMN_42173	C6ORF52	XM_938497.2	XM_938497.2		347744	113417929	XM_938497.2	C6orf52	XP_943590.1	ILMN_1722945	0006040156	A	403	CACTGGCAGCCTCTGGACACAGTTCACTCCGAAATCCCAGATGAGACCCC				6p24.2a	PREDICTED: Homo sapiens chromosome 6 open reading frame 52 (C6orf52), mRNA.					
Homo sapiens	RefSeq	NM_006876.1	ILMN_16433	B3GNT6	NM_006876.1	NM_006876.1		11041	5802983	NM_006876.1	B3GNT6	NP_006867.1	ILMN_1715384	0002260220	S	1497	GCTGTGTGGCCTTGAGTAAATCCCGTTACCTCTCTGAGCCTCGGTTACCC	11	-	65869876-65869925	11q13.1e	Homo sapiens UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (B3GNT6), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11821425] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The stepwise addition of sugar residues to the initially added O-linked sugar (usually GalNAc) to form the core 3 O-glycan structure, GlcNAc-beta-1->3-GalNAc [goid 16269] [pmid 11821425] [evidence NAS]	Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [pmid 11821425] [evidence IDA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: beta-D-galactosyl-1,3-(N-acetyl-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP-N-acetyl-D-glucosamine = N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,3-(N-acetyl-beta-D-glucosaminyl-1,6)-N-acetyl-D-galactosaminyl-R + UDP [goid 47223] [pmid 11821425] [evidence NAS]	iGNT; iGAT; BETA3GNTI	iGNT; iGAT; BETA3GNTI
Homo sapiens	RefSeq	NM_000710.2	ILMN_24608	BDKRB1	NM_000710.2	NM_000710.2		623	20544171	NM_000710.2	BDKRB1	NP_000701.2	ILMN_1734611	0006940500	S	962	ATCCTCACGCTCGTGGTTGCCTTCCTGGTCTGCTGGGCCCCTTACCACTT	14	+	95800526-95800575	14q32.2a	Homo sapiens bradykinin receptor B1 (BDKRB1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9930991] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8063797] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9930991] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8063797] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 8063797] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with bradykinin to initiate a change in cell activity [goid 4947] [pmid 10422787] [evidence TAS]	BKR1; B1BKR; BKB1R; B1R; BRADYB1	BKR1; B1BKR; BKB1R; B1R; BRADYB1
Homo sapiens	RefSeq	NM_203510.1	ILMN_14050	TM6SF2	NM_001001524.2	NM_001001524.2		53345	112181176	NM_001001524.2	TM6SF2	NP_001001524.2	ILMN_1757757	0006020747	A	1188	AGCTGTGGACTCAGGACCCAGGACTCTGTTTACGTGCCCAGTCAGCCCTA	19	-	19375419-19375468	19p13.11a	Homo sapiens transmembrane 6 superfamily member 2 (TM6SF2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA1926	KIAA1926
Homo sapiens	RefSeq	NM_001001524.1	ILMN_14050	TM6SF2	NM_001001524.2	NM_001001524.2		53345	112181176	NM_001001524.2	TM6SF2	NP_001001524.2	ILMN_1706419	0006040367	I	552	ATCAGGCCTGCCTTCTTCCTCACCATCCCCTACCTGCTGGTGCCATGCTG	19	-	19379496-19379545	19p13.11a	Homo sapiens transmembrane 6 superfamily member 2 (TM6SF2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA1926	KIAA1926
Homo sapiens	RefSeq	NM_203510.1	ILMN_14050	TM6SF2	NM_001001524.2	NM_001001524.2		53345	112181176	NM_001001524.2	TM6SF2	NP_001001524.2	ILMN_1686951	0007150521	I	1319	TCCAGTGGGTGGGATGGAGACCAACGACCAAGTGTTCCTGCAAGGAGAGC	19	-	19375288-19375337	19p13.11a	Homo sapiens transmembrane 6 superfamily member 2 (TM6SF2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	KIAA1926	KIAA1926
Homo sapiens	RefSeq	NM_001009598.1	ILMN_27034	RXRG	NM_001009598.1	NM_001009598.1		6258	58331206	NM_001009598.1	RXRG	NP_001009598.1	ILMN_2263333	0001450228	I	387	ATCGCTAGGGCTGTGAAAACAGATACTGTGAGCCCTGAACCCTCCAGGAG	1	-	165406351-165406385:165406386-165406400	1q23.3e	Homo sapiens retinoid X receptor, gamma (RXRG), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA];  [goid 4886] [pmid 8034312] [evidence TAS]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RXRC; NR2B3	RXRC; NR2B3
Homo sapiens	RefSeq	NM_001009598.1	ILMN_27034	RXRG	NM_001009598.1	NM_001009598.1		6258	58331206	NM_001009598.1	RXRG	NP_001009598.1	ILMN_1809730	0001340066	A	231	GCCTGGGAGCCGAGAGAGGCGGTAATATTTAGAAGCTGCACAGGAGAGGA	1	-	165414150-165414199	1q23.3e	Homo sapiens retinoid X receptor, gamma (RXRG), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA];  [goid 4886] [pmid 8034312] [evidence TAS]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RXRC; NR2B3	RXRC; NR2B3
Homo sapiens	RefSeq	NM_002060.2	ILMN_16928	GJA4	NM_002060.2	NM_002060.2		2701	62865884	NM_002060.2	GJA4	NP_002051.2	ILMN_1671106	0002480546	S	1375	AGCTGATCCAGAGGAACCCAGAGCCAACTTACCCCAACCTCACCCTATGG	1	+	35033688-35033737	1p34.3f	Homo sapiens gap junction protein, alpha 4, 37kDa (GJA4), mRNA.	An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7680674] [evidence TAS]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7680674] [evidence TAS]; The aggregation, arrangement and bonding together of a set of components to form a junction between cells [goid 7043] [pmid 7680674] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]		CX37	CX37
Homo sapiens	RefSeq	NM_001013254.1	ILMN_12606	LSP1	NM_001013254.1	NM_001013254.1		4046	61742790	NM_001013254.1	LSP1	NP_001013272.1	ILMN_1791623	0005270398	I	393	GATGCAGCAGGCAGGGCCACCCACGAGCAGGGCGGGGCCCTAACCTCCGA	11	+	1849067-1849116	11p15.5b	Homo sapiens lymphocyte-specific protein 1 (LSP1), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 8274738] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 8274738] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 2174784] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8274738] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	WP34; pp52	WP34; pp52
Homo sapiens	RefSeq	XM_938449.1	ILMN_12606	LSP1	NM_001013254.1	NM_001013254.1		4046	61742790	NM_001013254.1	LSP1	NP_001013272.1	ILMN_1699836	0006420403	S	1463	GCATGGGAAGTATGAGAAGGTGCTTGTGGAAGGGGGCCCGGCTCCCTAGG	11	+	1865321-1865369:1865370-1865370	11p15.5b	Homo sapiens lymphocyte-specific protein 1 (LSP1), transcript variant 3, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 8274738] [evidence TAS]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 8274738] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 2174784] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8274738] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]	WP34; pp52	
Homo sapiens	RefSeq	NM_005229.2	ILMN_14942	ELK1	NM_005229.2	NM_005229.2		2002	11496880	NM_005229.2	ELK1	NP_005220.1	ILMN_1654289	0000510162	S	2619	GGCAAGAGAGAGTGGGTTCAAAAGACTCCTGGGCTCACCTGTTAGCGCTG	X	-	47380023-47380072	Xp11.23f	Homo sapiens ELK1, member of ETS oncogene family (ELK1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14970218] [evidence IC ]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 14970218] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 14970218] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16533805] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16291755] [evidence IPI]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]		
Homo sapiens	RefSeq	NM_182491.1	ILMN_21900	ZFAND2A	NM_182491.1	NM_182491.1		90637	32698821	NM_182491.1	ZFAND2A	NP_872297.1	ILMN_1694671	0000870379	S	759	GCCCCATTGAGCACCATCCCACACTGGCTGCTGATCTTGTTTGTTGAGGG	7	-	1159104-1159153	7p22.3b	Homo sapiens zinc finger, AN1-type domain 2A (ZFAND2A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	AIRAP	AIRAP
Homo sapiens	RefSeq	NM_017902.1	ILMN_9413	HIF1AN	NM_017902.2	NM_017902.2		55662	148596935	NM_017902.2	HIF1AN	NP_060372.2	ILMN_1681812	0002070095	S	2756	TGCCAAAGGTTTACTTCCAGCATCTGAGCTCTGGCTCTCACCCCTGAAGC	10	+	102299012-102299061	10q24.31a	Homo sapiens hypoxia inducible factor 1, alpha subunit inhibitor (HIF1AN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: peptide L-aspartate + 2-oxoglutarate + O2 = peptide 3-hydroxy-L-aspartate + succinate + CO2 [goid 4597] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12446723] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor [goid 16702] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp762F1811; FIH1; FLJ22027; FLJ20615	DKFZp762F1811; FIH1; FLJ22027; FLJ20615
Homo sapiens	RefSeq	XM_932681.1	ILMN_165213	LOC728441	XM_001129412.1	XM_001129412.1		728441	113429321	XM_001129412.1	LOC728441	XP_001129412.1	ILMN_1737387	0004230075	A	1558	ATCCAGCCAGGGAAGCAGCCGCTCTTGTCCATGTGCCTGACGATCATGGT	22	-	19893145-19893185:19893288-19893296	22q11.21f	PREDICTED: Homo sapiens similar to Gamma-glutamyltranspeptidase 1 precursor (Gamma-glutamyltransferase 1) (CD224 antigen), transcript variant 2 (LOC728441), mRNA.					
Homo sapiens	RefSeq	NM_031449.3	ILMN_183938	ZMIZ2	NM_031449.3	NM_031449.3		83637	54607107	NM_031449.3	ZMIZ2	NP_113637.3	ILMN_1760718	0007150541	A	4951	CTAGGAGACTGGGACAAGCAAAAGGCTGCAAACAACCCAGAAGCCCATCC	7	+	44775812-44775861	7p13c	Homo sapiens zinc finger, MIZ-type containing 2 (ZMIZ2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16051670] [evidence IDA]; The Y-shaped region of a nuclear replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 43596] [pmid 16051670] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 16051670] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16051670] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA];  [goid 30374] [pmid 16051670] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp761I2123; KIAA1886; ZIMP7; hZIMP7	DKFZp761I2123; KIAA1886; ZIMP7; hZIMP7
Homo sapiens	RefSeq	XM_944958.1	ILMN_138865	SLCO3A1	XM_944958.1	XM_944958.1		28232	89039267	XM_944958.1	SLCO3A1	XP_950051.1	ILMN_1661200	0001300669	I	221	GCGTCCACCACATAGCCTGGTGCCAGCATTGAGAGGAGAATCCAGTGAGG				15q26.1d	PREDICTED: Homo sapiens solute carrier organic anion transporter family, member 3A1, transcript variant 3 (SLCO3A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]		
Homo sapiens	RefSeq	XM_001716667.1	ILMN_347729	LOC731932	XM_001716667.1	XM_001716667.1		731932	169205934	XM_001716667.1	LOC731932	XP_001716719.1	ILMN_3227427	0003310603	A	371	AAAACATCACTGTCAGAGGACCATTTGCTTCTAAGATGACACGTCTAAAG	13	-	45931129-45931177:45931178-45931178	13q14.13a	PREDICTED: Homo sapiens hypothetical LOC731932 (LOC731932), mRNA.					
Homo sapiens	RefSeq	XM_001716667.1	ILMN_347729	LOC731932	XM_001716667.1	XM_001716667.1		731932	169205934	XM_001716667.1	LOC731932	XP_001716719.1	ILMN_3304028	0005960717	M	251	CTGGCTACGGCTGTGGGTATGGCTGTGGTTATGGAACTGGCTATGGCTGT	13	-	45931249-45931298	13q14.13a	PREDICTED: Homo sapiens hypothetical LOC731932 (LOC731932), mRNA.					
Homo sapiens	RefSeq	XM_939415.1	ILMN_34985	LOC650329	XM_939415.1	XM_939415.1		650329	89037189	XM_939415.1	LOC650329	XP_944508.1	ILMN_1801536	0002470725	S	301	AATGCACAGCCCGAAGAGTCTGGGCAGATAAACAAGGTGCCGGACACGGC					PREDICTED: Homo sapiens hypothetical protein LOC650329 (LOC650329), mRNA.					
Homo sapiens	RefSeq	XM_931578.1	ILMN_30709	LOC643493	XM_931578.1	XM_931578.1		643493	88990473	XM_931578.1	LOC643493	XP_936671.1	ILMN_1713574	0002750451	S	1180	GCTATGCCCCCAATTCAGGGAGTAGAACAGACAGGCTTAAGAACAGTGCC	6	+	4101523-4101572		PREDICTED: Homo sapiens hypothetical protein LOC643493 (LOC643493), mRNA.					
Homo sapiens	RefSeq	NM_152527.3	ILMN_5489	SLC16A14	NM_152527.3	NM_152527.3		151473	42415495	NM_152527.3	SLC16A14	NP_689740.2	ILMN_1736546	0002360273	S	3715	AGCTGAGGCAATGCTCCCTCCTCTATCTCTCTCTGTGTAATTTACCATAG	2	-	230900227-230900276	2q36.3e	Homo sapiens solute carrier family 16, member 14 (monocarboxylic acid transporter 14) (SLC16A14), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	FLJ30794; MCT14	FLJ30794; MCT14
Homo sapiens	RefSeq	NM_152527.3	ILMN_5489	SLC16A14	NM_152527.3	NM_152527.3		151473	42415495	NM_152527.3	SLC16A14	NP_689740.2	ILMN_2227385	0004850703	S	4016	CTTACTATGTTTTGAAAGTGGTGACTTCTACCGAATGAGTGGAAGTTCCC	2	-	230899926-230899975	2q36.3e	Homo sapiens solute carrier family 16, member 14 (monocarboxylic acid transporter 14) (SLC16A14), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	FLJ30794; MCT14	FLJ30794; MCT14
Homo sapiens	RefSeq	NM_173505.2	ILMN_16771	ANKRD29	NM_173505.2	NM_173505.2		147463	70995266	NM_173505.2	ANKRD29	NP_775776.2	ILMN_1749338	0003130114	S	1381	GGTGGACAGGGTTCTCAGTACTAAGCAAGGAGACAGAATGCTTTGTTCCT	18	-	21180820-21180869	18q11.2b	Homo sapiens ankyrin repeat domain 29 (ANKRD29), mRNA.				FLJ25053	FLJ25053
Homo sapiens	RefSeq	NM_013328.2	ILMN_18209	PYCR2	NM_013328.2	NM_013328.2		29920	21361453	NM_013328.2	PYCR2	NP_037460.2	ILMN_1808568	0003940639	S	1310	CCTGTCCCATGTTGGAAGTTGCTCTGAAGGGGTGGTAGATGCTGGAAGCC	1	-	226107913-226107962	1q42.12c	Homo sapiens pyrroline-5-carboxylate reductase family, member 2 (PYCR2), mRNA.		The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents [goid 8652] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	P5CR2	P5CR2
Homo sapiens	RefSeq	NM_007191.2	ILMN_7585	WIF1	NM_007191.2	NM_007191.2		11197	18379354	NM_007191.2	WIF1	NP_009122.1	ILMN_1721541	0005290753	S	917	GGACTAGAGGGAGAGCAGTGTGAAATCAGCAAATGCCCACAACCCTGTCG	12	-	63736151-63736173:63742528-63742554	12q14.3a	Homo sapiens WNT inhibitory factor 1 (WIF1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10201374] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]	WIF-1	WIF-1
Homo sapiens	RefSeq	NR_003194.1	ILMN_165933	SNORD114-2	NR_003194.1	NR_003194.1		767578	115391993	NR_003194.1	SNORD114-2		ILMN_3311085	0000150431	S	15	GACTGTTGGGGTATGAGTCAGTGAGGTTGAATAACAGTTTGTATCTGGAA	14	+	100487960-100488009	14q32.31a	Homo sapiens small nucleolar RNA, C/D box 114-2 (SNORD114-2), small nucleolar RNA.				14q(II-2)	14q(II-2)
Homo sapiens	RefSeq	NM_000732.3	ILMN_2372	CD3D	NM_000732.3	NM_000732.3		915	55775475	NM_000732.3	CD3D	NP_000723.1	ILMN_1724643	0006840736	S	1137	GCACTGGCTAGAACCTCCAGTACAATGTTGAATAGAAGTGGAGAGAGGAC	11	-	117710818-117710867	11q23.3d	Homo sapiens CD3D antigen, delta polypeptide (TiT3 complex) (CD3D), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A T cell receptor complex in which the TCR heterodimer comprises alpha and beta chains, associated with the CD3 complex; recognizes a complex consisting of an antigen-derived peptide bound to a class I or class II MHC protein [goid 42105] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 1831653] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 9485181] [evidence NAS]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 9485181] [evidence IC ]; The process of sparing immature T cells in the thymus which react with self-MHC protein complexes with low affinity levels from apoptotic death [goid 45059] [evidence ISS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 9485181] [evidence IC ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9485181] [evidence IPI]	T3D; CD3-DELTA	T3D; CD3-DELTA
Homo sapiens	RefSeq	NM_019040.2	ILMN_20665	ELP4	NM_019040.3	NM_019040.3		26610	91208434	NM_019040.3	ELP4	NP_061913.3	ILMN_1659339	0004120619	S	1227	AAAATGGATCTGGCAGAATCCGCCAAGCGGCTGGGCCCAGGCTGTGGCAT	11	+	31610377-31610426	11p13f	Homo sapiens elongation protein 4 homolog (S. cerevisiae) (ELP4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11818576] [evidence IDA]; Any protein complex that interacts with RNA polymerase II to increase (positive transcription elongation factor) or reduce (negative transcription elongation factor) the rate of transcription elongation [goid 8023] [pmid 11818576] [evidence IDA]; Large protein complex composed of the RNA polymerase core complex and a variety of other proteins including transcription factor complexes TFIIA, D, E, F, and H which are required for promoter recognition, and the Mediator subcomplex. Catalyzes the synthesis of eukaryotic pre-mRNA [goid 16591] [pmid 11714725] [evidence IDA]; A heterohexameric protein complex that is involved in tRNA modification, and exerts indirect effects on transcriptional elongation and exocytosis. The complex can associate physically with hyperphosphorylated RNA polymerase II; it contains two discrete heterotrimeric subcomplexes [goid 33588] [pmid 11714725] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 11818576] [evidence IDA]	Catalysis of the addition of an acetyl group to a histone, specific for histones H3 and H4 [goid 4406] [pmid 11714725] [evidence IDA]; Modulation of the activity of the enzyme phosphorylase kinase [goid 8607] [pmid 11818576] [evidence IDA]; Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule catalyzed by RNA polymerase II following transcription initiation [goid 16944] [pmid 11714725] [evidence IC ]	C11orf19; PAX6NEB; FLJ20498; dJ68P15A.1; PAXNEB	C11orf19; FLJ20498; PAX6NEB; dJ68P15A.1; PAXNEB
Homo sapiens	Unigene	Hs.575831	ILMN_128012	HS.575831	Hs.575831		Hs.575831		12237032	BF849882			ILMN_1857546	0001300243	S	162	GGACTTGTTTACTTGGTGGAAGAGGCAGCGGACCTGCGGAGTCAGGCCAT	1	-	206052087-206052136		PM4-EN0063-151100-002-b09 EN0063 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_176894.1	ILMN_163353	P2RY13	NM_023914.2	NM_023914.2		53829	29171720	NM_023914.2	P2RY13	NP_076403.2	ILMN_1664094	0000520392	A	2671	CCCACCATCACCTCAAACCCAATCACCCCCTCCTCTGTATGCTGTCACAC	3	-	152526923-152526972	3q25.1c	Homo sapiens purinergic receptor P2Y, G-protein coupled, 13 (P2RY13), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y13; FKSG77; SP174; GPR94; GPCR1; GPR86	P2Y13; FKSG77; SP174; GPR86; GPR94; GPCR1
Homo sapiens	RefSeq	NM_023914.2	ILMN_163353	P2RY13	NM_023914.2	NM_023914.2		53829	29171720	NM_023914.2	P2RY13	NP_076403.2	ILMN_1744578	0004210246	I	19	AACACATCTATTGAAAGTGTTGGATAAATGCAGGATGTTAATATGCTATA	3	-	152529575-152529624	3q25.1c	Homo sapiens purinergic receptor P2Y, G-protein coupled, 13 (P2RY13), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y13; FKSG77; SP174; GPR94; GPCR1; GPR86	P2Y13; FKSG77; SP174; GPR86; GPR94; GPCR1
Homo sapiens	Unigene	Hs.403213	ILMN_89672	HS.403213	Hs.403213		Hs.403213		23541861	BU686700			ILMN_1895853	0007560519	S	204	GGTTCAGTGATTGCCCAGAGTGGTATGAGCTGCAGGAAACCAGGAGGAAG	6	-	47246260-47246309		UI-CF-DU1-adl-c-02-0-UI.s1 UI-CF-DU1 Homo sapiens cDNA clone UI-CF-DU1-adl-c-02-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_021146.2	ILMN_183675	ANGPTL7	NM_021146.2	NM_021146.2		10218	20127595	NM_021146.2	ANGPTL7	NP_066969.1	ILMN_1813361	0002640348	S	1903	CCCCTGCTCGCCTTGGTCATGTACAGCACTGAAAGGAATGAAGCACCAGC	1	+	11178290-11178339	1p36.22b	Homo sapiens angiopoietin-like 7 (ANGPTL7), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 8026862] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	RP4-647M16.2; dJ647M16.1; AngX; CDT6	RP4-647M16.2; dJ647M16.1; AngX; CDT6
Homo sapiens	RefSeq	NM_024045.1	ILMN_577	DDX50	NM_024045.1	NM_024045.1		79009	13129005	NM_024045.1	DDX50	NP_076950.1	ILMN_1712320	0000430577	S	2204	CCGGTCAGGTAGACAGAGTCGACAAGGAAGTCGCTCAGGAAGTCGACAAG	10	+	70376275-70376324	10q21.3e	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 50 (DDX50), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RH-II/GuB; GUB; GU2; MGC3199	RH-II/GuB; GUB; GU2; MGC3199
Homo sapiens	RefSeq	XM_001723457.1	ILMN_344328	LOC100134315	XM_001723457.1	XM_001723457.1		100134315	169171471	XM_001723457.1	LOC100134315	XP_001723509.1	ILMN_3243088	0001470010	S	47	GCCAGACCCTGATGACTTGATATCTAAACCTAGAATGTCCACTCCTTCAG					PREDICTED: Homo sapiens hypothetical protein LOC100134315 (LOC100134315), mRNA.					
Homo sapiens	RefSeq	NM_000901.1	ILMN_166092	NR3C2	NM_000901.2	NM_000901.2		4306	141802135	NM_000901.2	NR3C2	NP_000892.1	ILMN_1661777	0007050008	S	5133	AAGACACCTGCCTTAGTGCAAGGGGAAACCTGTGAAAGCTGCACTCAGAG	4	-	149219931-149219980	4q31.23b	Homo sapiens nuclear receptor subfamily 3, group C, member 2 (NR3C2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 3037703] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 3037703] [evidence TAS]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [pmid 9662404] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11518808] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC133092; MR; MLR; MCR	MGC133092; MR; MLR; MCR
Homo sapiens	RefSeq	XM_941211.1	ILMN_309736	NBEAL2	NM_015175.1	NM_015175.1		23218	149944547	NM_015175.1	NBEAL2	NP_055990.1	ILMN_1660629	0004200743	A	8729	CGCTGTTTCGTCAAAGCACGAGGGCCGCCTGTGGCCTTAATTCCTAACGG	3	+	47025869-47025918	3p21.31h	Homo sapiens neurobeachin-like 2 (NBEAL2), mRNA.			The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KIAA0540	
Homo sapiens	RefSeq	NM_006113.4	ILMN_173489	VAV3	NM_006113.4	NM_006113.4		10451	120432043	NM_006113.4	VAV3	NP_006104.4	ILMN_2290068	0000670129	I	1053	GTACCACCTTCTCCTCCAGGAACTGGTCAAACATACCACTGATCCGACTG	1	-	108308841-108308890	1p13.3d-p13.3c	Homo sapiens vav 3 guanine nucleotide exchange factor (VAV3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 10523675] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 10523675] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 10523675] [evidence TAS]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18518979] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 30676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ40431	FLJ40431
Homo sapiens	RefSeq	NM_006113.3	ILMN_173489	VAV3	NM_006113.4	NM_006113.4		10451	120432043	NM_006113.4	VAV3	NP_006104.4	ILMN_1657679	0006130326	S	4490	GTTGCATTTCATGGGCCTGGGGGTTTCCTAGCAGAGGATATTGGAGCCCC	1	-	108114713-108114762	1p13.3d-p13.3c	Homo sapiens vav 3 guanine nucleotide exchange factor (VAV3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 10523675] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 10523675] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 10523675] [evidence TAS]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18518979] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 30676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ40431	
Homo sapiens	RefSeq	NM_006113.4	ILMN_173489	VAV3	NM_006113.4	NM_006113.4		10451	120432043	NM_006113.4	VAV3	NP_006104.4	ILMN_2399463	0006560279	A	4661	CTTTGTCTTGCCTGTATGCAGCCCTCGTGTAATACGGTGAATTAGAGTGG	1	-	108114542-108114591	1p13.3d-p13.3c	Homo sapiens vav 3 guanine nucleotide exchange factor (VAV3), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	Fusion of the membrane of a transport vesicle with its target membrane [goid 6906] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [pmid 10523675] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the rate of GTP hydrolysis by a GTPase [goid 43087] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 10523675] [evidence TAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [pmid 10523675] [evidence TAS]; Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18518979] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rac family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 30676] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ40431	FLJ40431
Homo sapiens	RefSeq	NM_001014286.1	ILMN_1616	FAM48A	NM_001014286.2	NM_001014286.2		55578	98961134	NM_001014286.2	FAM48A	NP_001014308.2	ILMN_1669555	0005700424	A	2089	CTTCAAGTCTCAGGCCCTTAAATCTACTCCAGCTTCCAGGTGGTTCACTT	13	-	37591483-37591501:37593479-37593509	13q13.3b	Homo sapiens family with sequence similarity 48, member A (FAM48A), transcript variant 1, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16751104] [evidence IPI]	bA421P11.4; FP757; C13; P38IP; C13orf19	bA421P11.4; FP757; C13; P38IP; C13orf19
Homo sapiens	RefSeq	NM_033168.2	ILMN_29294	B3GALNT1	NM_033168.2	NM_033168.2		8706	84452149	NM_033168.2	B3GALNT1	NP_149358.1	ILMN_2325347	0002970040	A	3063	GTCATAGCCTAGTGCATTACTCACGTGTCTGTGGAGATGCTGGTGTAAAC	3	-	162284475-162284524	3q26.1a	Homo sapiens beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) (B3GALNT1), transcript variant 3, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [pmid 9582303] [evidence TAS]; The chemical reactions and pathways resulting in the formation of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9312] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a galactosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 8378] [evidence IEA]; Catalysis of the reaction: UDP-galactose + N-acetylglucosamine = galactose-beta-1,3-N-acetylglucosamine + UDP [goid 8499] [pmid 9582303] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide = UDP + beta-N-acetyl-D-galactosaminyl-(1->3)-alpha-D-galactosyl-(1->4)-beta-D-galactosyl-(1->4)-beta-D-glucosylceramide [goid 47273] [evidence IEA]	galT3; P1; B3GALT3; GLCT3; P; Gb4Cer; GLOB; beta3Gal-T3	galT3; P1; B3GALT3; GLCT3; P; Gb4Cer; GLOB; beta3Gal-T3
Homo sapiens	RefSeq	XM_928474.1	ILMN_39914	LOC645438	XM_928474.1	XM_928474.1		645438	89058204	XM_928474.1	LOC645438	XP_933567.1	ILMN_1658036	0000160487	S	1	ATGCAGAGCGCAGCACCCCACATCCAGAGCGCTCCAGAATCCATGAAGCA	21	+	42599084-42599133		PREDICTED: Homo sapiens similar to CG7874-PA (LOC645438), mRNA.					
Homo sapiens	RefSeq	NR_031751.1	ILMN_388673	MIR2117	NR_031751.1	NR_031751.1		100313779	269847726	NR_031751.1	MIR2117		ILMN_3310025	0004290246	S	1	CTCTGATTTACTTCTGTCCGGCATGGTGAACAGCAGGATTGGCTGTAGCT					Homo sapiens microRNA 2117 (MIR2117), microRNA.					
Homo sapiens	RefSeq	NM_002123.2	ILMN_29988	HLA-DQB1	NM_002123.2	NM_002123.2		3119	24797068	NM_002123.2	HLA-DQB1	NP_002114.2	ILMN_1661266	0007160474	S	783	CTTCCTCGGGCTGGGCCTTATCATCCATCACAGGAGTCAGAAAGGGCTCC	6	-	32736001-32736004:32737102-32737147	6p21.32b	Homo sapiens major histocompatibility complex, class II, DQ beta 1 (HLA-DQB1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 2998758] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 2998758] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 2998758] [evidence NAS]	HLA-DQB; IDDM1; CELIAC1	HLA-DQB; IDDM1; CELIAC1
Homo sapiens	RefSeq	NM_018292.2	ILMN_180436	QRSL1	NM_018292.3	NM_018292.3		55278	142384997	NM_018292.3	QRSL1	NP_060762.2	ILMN_1733364	0003190681	S	2890	GCTGATGAAGCAGAAGAGGGGATGCGCATGGCAAGAACTTGCCTTACCCC	6	+	107221769-107221818	6q21c	Homo sapiens glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 (QRSL1), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]	Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction [goid 16884] [evidence IEA]	FLJ13447; FLJ10989; DKFZP564C1278; FLJ12189; GatA	FLJ13447; FLJ10989; DKFZP564C1278; FLJ12189; GatA
Homo sapiens	RefSeq	NM_015450.1	ILMN_168719	POT1	NR_003103.1	NR_003103.1		25913	110671312	NR_003103.1	POT1		ILMN_1692041	0003840762	S	2639	CCTGCTTAAACAAGTACTGCTGAGATAAGTGTCTGATCAAGCTACAGTGT	7	-	124463744-124463793	7q31.33a	Homo sapiens POT1 protection of telomeres 1 homolog (S. pombe) (POT1), transcript variant 3, non-coding RNA.	The terminal region of a linear chromosome in the nucleus that includes the telomeric DNA repeats and associated proteins [goid 784] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16166375] [evidence EXP]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	The maintenace of proper telomeric length by the addition of telomeric repeats by telomerase [goid 7004] [pmid 12768206] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12768206] [evidence IPI]; Interacting selectively with single-stranded telomere-associated DNA [goid 43047] [pmid 12768206] [evidence IMP]	DKFZP586D211; hPot1	DKFZP586D211; hPot1
Homo sapiens	RefSeq	NM_173464.3	ILMN_21894	L3MBTL4	NM_173464.3	NM_173464.3		91133	158138527	NM_173464.3	L3MBTL4	NP_775735.2	ILMN_3307954	0000730433	S	3226	GGAGGGACACCATTTGTGGGTGGGGAGAAAGAGGGAGAGGTTCTATGTCC	18	-	6070894-6070943	18p11.31b-p11.31a	Homo sapiens l(3)mbt-like 4 (Drosophila) (L3MBTL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	HsT1031	HsT1031
Homo sapiens	RefSeq	XM_925927.1	ILMN_31899	LOC642408	XM_925927.1	XM_925927.1		642408	89060265	XM_925927.1	LOC642408	XP_931020.1	ILMN_1666315	0006590494	S	1	ATGTCAACATTAATGAGAGTTTGGGAGAAATTGAGTCCAATTCTCATGGA	X	+	144654352-144654401		PREDICTED: Homo sapiens hypothetical protein LOC642408 (LOC642408), mRNA.					
Homo sapiens	RefSeq	NM_153636.1	ILMN_6193	CPNE7	NM_153636.1	NM_153636.1		27132	25141327	NM_153636.1	CPNE7	NP_705900.1	ILMN_2313946	0006130543	A	2054	AGATCATGAGGGACTTGGAGGGAGCTGGGAGTTCATCCACGGGAGACCCT	16	+	88190777-88190826	16q24.3b	Homo sapiens copine VII (CPNE7), transcript variant 1, mRNA.		The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 10534407] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 10534407] [evidence TAS]	MGC34192	MGC34192
Homo sapiens	RefSeq	XM_929174.1	ILMN_31584	LOC646223	XM_929174.1	XM_929174.1		646223	89061227	XM_929174.1	LOC646223	XP_934267.1	ILMN_1721423	0003780114	S	228	TGAATACTTCACAGATCGAAGCAGTTTCATATTGGAAGGGGTCCAATGGG	Y	-	3166493-3166542		PREDICTED: Homo sapiens hypothetical protein LOC646223 (LOC646223), mRNA.					
Homo sapiens	RefSeq	NM_206887.1	ILMN_178362	DSCAM	NM_001389.3	NM_001389.3		1826	45827724	NM_001389.3	DSCAM	NP_001380.2	ILMN_1788759	0002480112	A	6982	AGGATGAGTGCCGTCAGTGAAGGGGTGGGGGGAATCAATTTGGTTTTCTC	21	-	41384420-41384469	21q22.2b-q22.2c	Homo sapiens Down syndrome cell adhesion molecule (DSCAM), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9426258] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9426258] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9426258] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9426258] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9426258] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CHD2-52; CHD2-42	CHD2-52; CHD2-42
Homo sapiens	RefSeq	NM_001389.3	ILMN_178362	DSCAM	NM_001389.3	NM_001389.3		1826	45827724	NM_001389.3	DSCAM	NP_001380.2	ILMN_1658420	0001300202	I	5248	TCTCCTGTATCCTGGTGGGGGTCTTGCTGCTGTTTGTGCTCCTGCTGGTT	21	-	41447006-41447055	21q22.2b-q22.2c	Homo sapiens Down syndrome cell adhesion molecule (DSCAM), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9426258] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9426258] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9426258] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9426258] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9426258] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CHD2-52; CHD2-42	CHD2-52; CHD2-42
Homo sapiens	RefSeq	XM_939850.1	ILMN_174371	C6ORF184	XM_168053.7	XM_168053.7		221261	113417628	XM_168053.7	C6orf184	XP_168053.1	ILMN_1670737	0004040356	S	311	ACTGAGGGCATTGGGTCTGAGCTTCAAGAGCTGCAGAACATGATTGACAG	6	+	109723576-109723588:109728127-109728163	6q21f	PREDICTED: Homo sapiens chromosome 6 open reading frame 184, transcript variant 1 (C6orf184), mRNA.					
Homo sapiens	RefSeq	NM_080879.2	ILMN_20197	RAB40A	NM_080879.2	NM_080879.2		142684	56550076	NM_080879.2	RAB40A	NP_543155.2	ILMN_2218068	0004490241	S	1202	GGAATCGCTCCAGGAAAAACTCTGGTTACACCTGGAAGATGGAAGTCGCA	X	-	102754775-102754824	Xq22.2a	Homo sapiens RAB40A, member RAS oncogene family (RAB40A), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	RAR2A; Rar-2; MGC142061	RAR2A; Rar-2; MGC142061
Homo sapiens	RefSeq	NM_182597.1	ILMN_181442	C7ORF53	NM_182597.1	NM_182597.1		286006	32699018	NM_182597.1	C7orf53	NP_872403.1	ILMN_1804895	0005390497	S	1277	GGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCA	7	+	111917760-111917809	7q31.1c	Homo sapiens chromosome 7 open reading frame 53 (C7orf53), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ39575; MGC161427; MGC42850; MGC163440	FLJ39575; MGC161427; MGC42850; MGC163440
Homo sapiens	RefSeq	NM_003426.2	ILMN_13074	ZNF74	NM_003426.2	NM_003426.2		7625	116875833	NM_003426.2	ZNF74	NP_003417.2	ILMN_2383871	0002710093	A	2995	CCTCGGACGGGCTCCTGACACGGCTTTAATCAGGAGTTTCCTCCATAAAC	22	+	19091879-19091928	22q11.21d	Homo sapiens zinc finger protein 74 (ZNF74), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1639391] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1639391] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp520; ZNF520; Cos52	Zfp520; ZNF520; Cos52
Homo sapiens	RefSeq	NM_003426.2	ILMN_13074	ZNF74	NM_003426.2	NM_003426.2		7625	116875833	NM_003426.2	ZNF74	NP_003417.2	ILMN_2281404	0000060246	I	508	AGAGAATCTCGAGGATATATCGGGTTGGGGTCTTCCCGAAGCCAGGTCCA	22	+	19079657-19079706	22q11.21d	Homo sapiens zinc finger protein 74 (ZNF74), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 1639391] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1639391] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp520; ZNF520; Cos52	Zfp520; ZNF520; Cos52
Homo sapiens	RefSeq	NM_017985.3	ILMN_137262	C9ORF68	NM_017985.3	NM_017985.3		55064	66772848	NM_017985.3	C9orf68	NP_060455.3	ILMN_1736538	0006520673	S	1644	CAGCTGGCCTACTGCCTGAGTATAAGCCAAGCACACTTCCCATGGCTCTT	9	-	4578874-4578923	9p24.2a-p24.1c	Homo sapiens chromosome 9 open reading frame 68 (C9orf68), mRNA.				bA6J24.2; FLJ10058; RP11-280I16.2	bA6J24.2; FLJ10058; RP11-280I16.2
Homo sapiens	RefSeq	NM_176878.1	ILMN_3904	INADL	NM_176878.1	NM_176878.1		10207	29029547	NM_176878.1	INADL	NP_795353.1	ILMN_1724666	0002340632	I	5205	CAGTGGCATGTACCTGTTGTCTCAGCTATGTGGGAAGATCACTTGAGGCC	1	+	62353026-62353075	1p31.3d	Homo sapiens InaD-like (Drosophila) (INADL), transcript variant 4, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9280290] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9280290] [evidence NAS]	Cipp; PATJ	Cipp; PATJ
Homo sapiens	RefSeq	XM_001718747.1	ILMN_335501	LOC100130905	XM_001718747.1	XM_001718747.1		100130905	169205598	XM_001718747.1	LOC100130905	XP_001718799.1	ILMN_3177167	0000240754	A	96	CCGGTTCAAAGTGGAAGACAAAGACATCCATGAAAAGCCACCTGTTATTC				12q23.3c	PREDICTED: Homo sapiens hypothetical LOC100130905 (LOC100130905), mRNA.					
Homo sapiens	RefSeq	XM_001718747.1	ILMN_335501	LOC100130905	XM_001718747.1	XM_001718747.1		100130905	169205598	XM_001718747.1	LOC100130905	XP_001718799.1	ILMN_3253627	0006370110	M	257	ACTGCTCTTTAAGAGGGGACAAGAAATTGGGGGGACCCGAGGCCTTCCAG				12q23.3c	PREDICTED: Homo sapiens hypothetical LOC100130905 (LOC100130905), mRNA.					
Homo sapiens	RefSeq	XR_037073.1	ILMN_340116	LOC642996	XR_037073.1	XR_037073.1		642996	169213194	XR_037073.1	LOC642996		ILMN_3205395	0006590301	A	2601	AACCTCAACCAAATTTACCTTACTTTCCTTCCAAAATATCCACTTTCAGG				18q21.32b	PREDICTED: Homo sapiens misc_RNA (LOC642996), miscRNA.					
Homo sapiens	RefSeq	NM_006451.3	ILMN_879	PAIP1	NM_006451.3	NM_006451.3		10605	34452728	NM_006451.3	PAIP1	NP_006442.2	ILMN_1776398	0004220349	I	367	GGCACCAGCCGCCGCAACCCAAAGCCCCGGGCTTCCTGCAGCCACCGCCG	5	-	43592531-43592580	5p12b	Homo sapiens poly(A) binding protein interacting protein 1 (PAIP1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9548260] [evidence TAS]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [pmid 9548260] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]; Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules [goid 48255] [pmid 11997512] [evidence TAS]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9548260] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11997512] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10970864] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9548260] [evidence IPI]; Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide [goid 8494] [pmid 9548260] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC12360	MGC12360
Homo sapiens	RefSeq	XM_925858.1	ILMN_139322	LOC642316	XM_925858.1	XM_925858.1		642316	88990429	XM_925858.1	LOC642316	XP_930951.1	ILMN_1801104	0005720010	S	241	GCCCCTGAGAAAACAGACCCATTTCCTCTCTGCCCACCTCTTTCCCTGAC	6	+	148559-148608	6p25.3b	PREDICTED: Homo sapiens hypothetical protein LOC642316 (LOC642316), mRNA.					
Homo sapiens	RefSeq	NM_004198.2	ILMN_24203	CHRNA6	NM_004198.2	NM_004198.2		8973	21361147	NM_004198.2	CHRNA6	NP_004189.1	ILMN_1756578	0000010364	S	1673	CTTGCACATTAGGAAGCAGAATATCCTCCAGTGTAGCACAGGGGGAGAAG	8	-	42727287-42727336	8p11.21a	Homo sapiens cholinergic receptor, nicotinic, alpha 6 (CHRNA6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A protein complex that acts as an acetylcholine receptor, and forms a transmembrane channel through which ions may pass in response to ligand binding. The complex is a homo- or heteropentamer of subunits that are members of a neurotransmitter receptor superfamily [goid 5892] [pmid 8906617] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]; A specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft). Neurotransmitters across the synaptic cleft and transmit the signal to the postsynaptic membrane [goid 45211] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8906617] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8906617] [evidence TAS]	 [goid 4889] [pmid 8906617] [evidence TAS]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts [goid 5230] [evidence IEA]; Combining with acetylcholine to initiate a change in cell activity [goid 15464] [pmid 8906617] [evidence TAS]	CHNRA6	CHNRA6
Homo sapiens	RefSeq	NM_015425.1	ILMN_170136	POLR1A	NM_015425.3	NM_015425.3		25885	114158670	NM_015425.3	POLR1A	NP_056240.2	ILMN_1780758	0000940619	S	5649	CAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAGTGGG	2	-	86254389-86254438	2p11.2f	Homo sapiens polymerase (RNA) I polypeptide A, 194kDa (POLR1A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12393749] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12646563] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9582279] [evidence EXP]; RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5736] [evidence NAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16514417] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	FLJ21915; RPO1-4; DKFZP586M0122; MGC87965; RPA1	FLJ21915; DKFZP586M0122; RPO1-4; MGC87965; RPA1
Homo sapiens	Unigene	Hs.129094	ILMN_76731	HS.129094	Hs.129094		Hs.129094		27826696	BX093818			ILMN_1906794	0000610187	S	330	GCTTCCTTGGTGGCCTGGTTCTGGGAAGACTTTGGGACTCATTCCTGAAA	1	+	62672400-62672449		BX093818 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGp998K184065, mRNA sequence					
Homo sapiens	RefSeq	XM_940225.1	ILMN_30674	LOC651096	XM_940225.1	XM_940225.1		651096	89057425	XM_940225.1	LOC651096	XP_945318.1	ILMN_1767852	0002100630	S	99	CCCGCGCACACACGGACGGAAACTGGTAGAGAGTGATAGACGGAGAATGA					PREDICTED: Homo sapiens hypothetical protein LOC651096 (LOC651096), mRNA.					
Homo sapiens	RefSeq	NM_033404.2	ILMN_23722	KNDC1	NM_033404.2	NM_033404.2		85442	46243679	NM_033404.2	KNDC1	NP_208383.2	ILMN_1663944	0006180390	I	3690	ATTTGAGGGTCCAATGCCAGGAAGCCCTGGGGCGAGGGGCAGAGTGACCA	10	+	134870557-134870606	10q26.3f	Homo sapiens kinase non-catalytic C-lobe domain (KIND) containing 1 (KNDC1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	RP13-439H18.3; bB439H18.3; FLJ16067; C10orf23; RASGEF2	RP13-439H18.3; bB439H18.3; FLJ16067; C10orf23; RASGEF2
Homo sapiens	RefSeq	NM_175885.3	ILMN_183956	FAM181B	NM_175885.3	NM_175885.3		220382	54873601	NM_175885.3	FAM181B	NP_787081.2	ILMN_1735502	0004730242	S	1719	GCTGGCTTCTGTAGCCACCTGTCCCTTCTATTTTTCAGCGAAGGTCAGTG	11	-	82443138-82443187	11q14.1d	Homo sapiens family with sequence similarity 181, member B (FAM181B), mRNA.					
Homo sapiens	RefSeq	NM_175885.3	ILMN_183956	FAM181B	NM_175885.3	NM_175885.3		220382	54873601	NM_175885.3	FAM181B	NP_787081.2	ILMN_3242758	0005090458	S	1408	CGGGACTGACTTCGAGGCACGCTTCCCTTCATTAGAGACGGCTGTGGAGA	11	-	82443449-82443490:82443491-82443498	11q14.1d	Homo sapiens family with sequence similarity 181, member B (FAM181B), mRNA.					
Homo sapiens	RefSeq	XM_938795.1	ILMN_39831	LOC649722	XM_938795.1	XM_938795.1		649722	88952876	XM_938795.1	LOC649722	XP_943888.1	ILMN_1776535	0004850341	S	2481	CAATGGAGGCCTTTTGGTGCTTACCACAGACTGTGCTCTTTCACTGACTG					PREDICTED: Homo sapiens similar to dual specificity phosphatase 5 (LOC649722), mRNA.					
Homo sapiens	RefSeq	XM_939491.1	ILMN_44396	LOC650406	XM_939491.1	XM_939491.1		650406	88980553	XM_939491.1	LOC650406	XP_944584.1	ILMN_1699323	0007210369	S	25	GCCTACCCCTGCTCTGCACCTGGTCCCATTGGCCGCCCAAGGGCTGAGGA					PREDICTED: Homo sapiens hypothetical protein LOC650406 (LOC650406), mRNA.					
Homo sapiens	RefSeq	NR_029612.1	ILMN_388197	MIR181B1	NR_029612.1	NR_029612.1		406955	262206233	NR_029612.1	MIR181B1		ILMN_3309199	0002340025	S	56	GTTGAACTGTGTGGACAAGCTCACTGAACAATGAATGCAACTGTGGCCCC				1q31.3d	Homo sapiens microRNA 181b-1 (MIR181B1), microRNA.					
Homo sapiens	RefSeq	XM_936595.1	ILMN_169484	INPP5A	XM_001133189.1	XM_001133189.1		3632	113422213	XM_001133189.1	INPP5A	XP_001133189.1	ILMN_1719273	0004570523	I	2725	TCCTTTCCCTTCTCCTGCCACCTTTGAAATGCTAACTCAGGGGAGCGGCC				10q26.3e	PREDICTED: Homo sapiens inositol polyphosphate-5-phosphatase, 40kDa (INPP5A), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8006039] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence NAS]	Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [evidence NAS]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [pmid 8006039] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	XM_936595.1	ILMN_169484	INPP5A	XM_001133189.1	XM_001133189.1		3632	113422213	XM_001133189.1	INPP5A	XP_001133189.1	ILMN_1664608	0000510739	A	2300	ACATTTCCTCATTGCTCCGCTACAGACAACCCATGTCATAACCTTGTTGC				10q26.3e	PREDICTED: Homo sapiens inositol polyphosphate-5-phosphatase, 40kDa (INPP5A), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 8006039] [evidence NAS]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence NAS]	Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [evidence NAS]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [evidence IEA]; Catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate [goid 4445] [pmid 8006039] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	XM_928933.1	ILMN_39823	FLJ32154	XM_940524.2	XM_940524.2		149650	113429051	XM_940524.2	FLJ32154	XP_945617.1	ILMN_1671331	0004120458	A	2268	CTGCGGGAGCAGCATTTCCAGGCAGACCTGACAGAAGGTGCCTTTGAGAG				20q13.33d	PREDICTED: Homo sapiens hypothetical protein FLJ32154 (FLJ32154), mRNA.					
Homo sapiens	RefSeq	XM_374627.3	ILMN_44269	GNAT3	XM_374627.3	XM_374627.3		346562	89027354	XM_374627.3	GNAT3	XP_374627.3	ILMN_1654354	0007380259	I	181	GAATATGTGATTCCAAATAATACATACTTATTCTCACCAAAATATTGTTC				7q21.11c	PREDICTED: Homo sapiens guanine nucleotide binding protein, alpha transducing 3 (GNAT3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G-protein coupled receptors to an effector protein [goid 5834] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]		
Homo sapiens	RefSeq	NM_014630.1	ILMN_171535	ZNF592	NM_014630.2	NM_014630.2		9640	108860696	NM_014630.2	ZNF592	NP_055445.2	ILMN_1671104	0004390458	S	4561	CTGCCTTTAGATCCTGAGAAGGAGGGAAATGAGGGGTGCTGACACAGTCC	15	+	83147049-83147098	15q25.3a	Homo sapiens zinc finger protein 592 (ZNF592), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0211; MGC138437; MGC138439	KIAA0211
Homo sapiens	RefSeq	NM_001001692.1	ILMN_4616	FLJ45139	NM_001001692.1	NM_001001692.1		400867	48717389	NM_001001692.1	FLJ45139	NP_001001692.1	ILMN_1807464	0002680576	S	3679	CAGGAAGTCTGCTGGAGCCTGGAAATGTCTGAGATGTTGCTCTGGGAGGC	21	-	39171179-39171228	21q22.2a	Homo sapiens FLJ45139 protein (FLJ45139), mRNA.					
Homo sapiens	RefSeq	NM_001011552.1	ILMN_21811	SLC9A4	NM_001011552.3	NM_001011552.3		389015	148727258	NM_001011552.3	SLC9A4	NP_001011552.2	ILMN_1701975	0007320619	S	3297	CCAAGGTTGCATGGTGAGTTCACAGTCGGATTGTCCTCCCTCCAAACTGA	2	+	102516022-102516071	2q12.1a	Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 4 (SLC9A4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [evidence IEA]	Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15297] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out) [goid 15299] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out) [goid 15385] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	NHE4; DKFZp313B031	NHE4; DKFZp313B031
Homo sapiens	RefSeq	NM_020865.1	ILMN_11905	DHX36	NM_020865.1	NM_020865.1		170506	18497285	NM_020865.1	DHX36	NP_065916.1	ILMN_2100000	0000240646	S	3138	GCCATTCTTCATCATTGTTTAAATTTTGGCTGGATGCCAAACCCTGGGAC	3	-	155476565-155476614	3q25.2c	Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 36 (DHX36), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MLEL1; DDX36; KIAA1488	DDX36; MLEL1; KIAA1488
Homo sapiens	RefSeq	NM_020865.1	ILMN_11905	DHX36	NM_020865.1	NM_020865.1		170506	18497285	NM_020865.1	DHX36	NP_065916.1	ILMN_1738272	0000150050	S	3054	CTCCCAGGAACTTTCCGCCACGATTCCAGGATGGATATTACAGCTGACAG	3	-	155476649-155476653:155476654-155476698	3q25.2c	Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 36 (DHX36), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	MLEL1; DDX36; KIAA1488	DDX36; MLEL1; KIAA1488
Homo sapiens	RefSeq	NM_001008530.1	ILMN_183373	LGMN	NM_001008530.1	NM_001008530.1		5641	56682963	NM_001008530.1	LGMN	NP_001008530.1	ILMN_2253017	0004250681	I	212	TGGCACAATCTTGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATT	14	-	93207442-93207491	14q32.12b	Homo sapiens legumain (LGMN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9065484] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AEP; LGMN1; PRSC1	AEP; LGMN1; PRSC1
Homo sapiens	RefSeq	NM_001008530.1	ILMN_183373	LGMN	NM_001008530.1	NM_001008530.1		5641	56682963	NM_001008530.1	LGMN	NP_001008530.1	ILMN_2332964	0001300452	A	1489	CCCACTGCTTCAACTGGCACTCCCCCACGTACGAGTATGCGTTGAGACAT	14	-	93171031-93171052:93172828-93172855	14q32.12b	Homo sapiens legumain (LGMN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 4197] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9065484] [evidence TAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	AEP; LGMN1; PRSC1	AEP; LGMN1; PRSC1
Homo sapiens	RefSeq	NM_005668.3	ILMN_13523	ST8SIA4	NM_005668.3	NM_005668.3		7903	38202228	NM_005668.3	ST8SIA4	NP_005659.1	ILMN_1756937	0006020470	I	5487	CAGGGTCTGCACTGTGAACTCCCCTGGAGATAAGTAAGTCCACTTTAGAA	5	-	100171304-100171353	5q21.1c	Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 (ST8SIA4), transcript variant 1, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the Golgi complex membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30173] [evidence IEA]	The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The conversion of N-linked glycan structures from the initially transferred oligosaccharide to a mature form, by the actions of glycosidases and glycosyltransferases. The early processing steps are conserved and play roles in glycoprotein folding and trafficking [goid 6491] [pmid 10766765] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9054414] [evidence TAS]; The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages [goid 9311] [pmid 10766765] [evidence TAS]	Catalysis of the reaction: CMP-N-acetylneuraminate + alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R = CMP + alpha-N-acetylneuraminyl-2,8-alpha-N-acetylneuraminyl-2,3-beta-D-galactosyl-R [goid 3828] [evidence IEA]	MGC61459; ST8SIA-IV; PST; MGC34450; PST1; SIAT8D	MGC61459; ST8SIA-IV; PST; MGC34450; PST1; SIAT8D
Homo sapiens	RefSeq	NM_004647.1	ILMN_13188	DPF1	NM_004647.1	NM_004647.1		8193	4758797	NM_004647.1	DPF1	NP_004638.1	ILMN_1769961	0006020554	S	1086	CGACTCTGGGGTGGTGCTCGCCTACCTGCCTCTCCGAGCTCCTCAATTCT	19	-	43394475-43394524	19q13.13d-q13.2a	Homo sapiens D4, zinc and double PHD fingers family 1 (DPF1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 8812431] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	neuro-d4; MGC150429; MGC150428; NEUD4	neuro-d4; MGC150429; MGC150428; NEUD4
Homo sapiens	RefSeq	NM_006192.1	ILMN_178809	PAX1	NM_006192.3	NM_006192.3		5075	153791841	NM_006192.3	PAX1	NP_006183.2	ILMN_1682096	0003520274	S	1278	AGCTGTGCATGGCGGGGAACTCGCGGCAGCAATGACCTTCAAGCATCCCA	20	+	21638024-21638073	20p11.22b	Homo sapiens paired box 1 (PAX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 9671740] [evidence TAS]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 1358810] [evidence TAS]; Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate [goid 7389] [evidence IEA]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell [goid 43367] [evidence IEA]; The process whereby a relatively unspecialized T cell acquires specialized features of a mature CD8-positive, alpha-beta T cell [goid 43374] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process whose specific outcome is the progression of the parathyroid gland over time, from its formation to the mature structure. The parathyroid gland is an organ specialised for secretion of parathyroid hormone [goid 60017] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	HUP48	HUP48
Homo sapiens	RefSeq	NM_001011878.1	ILMN_15499	DEFB121	NM_001011878.1	NM_001011878.1		245934	58865338	NM_001011878.1	DEFB121	NP_001011878.1	ILMN_1677178	0004150592	S	43	CTCCTTCTTCTGCTTTTGACTGTTACTCTGCTCCTGGCCCAGGTCACCCC	20	-	29993898-29993947	20q11.21b	Homo sapiens defensin, beta 121 (DEFB121), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	ESC42-RELC; DEFB-21	ESC42-RELC; DEFB-21
Homo sapiens	RefSeq	XM_938697.1	ILMN_138767	TALDO1	XM_938697.1	XM_938697.1		6888	89034447	XM_938697.1	TALDO1	XP_943790.1	ILMN_1670998	0000670167	I	605	GGGTCTACATGGCATCAGGCAAGTTTGACTCTCTCAGCCCTGGGGAATGC				11p15.5c	PREDICTED: Homo sapiens transaldolase 1 (TALDO1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11283793] [evidence EXP]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [pmid 9524206] [evidence TAS]; The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses [goid 6098] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate [goid 4801] [pmid 11283793] [evidence EXP]; Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate [goid 4801] [pmid 9524206] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	NM_178356.2	ILMN_24650	LCE4A	NM_178356.2	NM_178356.2		199834	156523273	NM_178356.2	LCE4A	NP_848133.1	ILMN_3234941	0002450609	S	333	GGACCAGGAGCAGCACCAAAGGAATTAGTGGGCGAAGGACCCATTGCAGC	1	+	150948479-150948528	1q21.3b	Homo sapiens late cornified envelope 4A (LCE4A), mRNA.		The process in which the cytoplasm of the outermost cells of the vertebrate epidermis is replaced by keratin. Keratinization occurs in the stratum corneum, feathers, hair, claws, nails, hooves, and horns [goid 31424] [evidence IEA]		SPRL4A; LEP8	SPRL4A; LEP8
Homo sapiens	RefSeq	XM_001732879.1	ILMN_353030	LOC644587	XM_001732879.1	XM_001732879.1		644587	169184155	XM_001732879.1	LOC644587	XP_001732931.1	ILMN_3296607	0003990128	M	691	CAACTTTGATCATGAGATGTCTGGCCCCAAGGTGGAGGCTTGCTCCTCTC				9p11.2c	PREDICTED: Homo sapiens similar to hCG1794531 (LOC644587), mRNA.					
Homo sapiens	RefSeq	NM_001004692.1	ILMN_23949	OR2T12	NM_001004692.1	NM_001004692.1		127064	52317212	NM_001004692.1	OR2T12	NP_001004692.1	ILMN_1775467	0002140414	S	62	CCCACCAAGTCCTCTTCATGATGCTTCTGGCCACCGTTTTGACCTCCCTG	1	-	248458769-248458818	1q44f	Homo sapiens olfactory receptor, family 2, subfamily T, member 12 (OR2T12), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-57	OR1-57
Homo sapiens	RefSeq	NM_001008540.1	ILMN_26451	CXCR4	NM_001008540.1	NM_001008540.1		7852	56790926	NM_001008540.1	CXCR4	NP_001008540.1	ILMN_2246410	0002600152	I	15	TCTAGTGGGCGGGGCAGAGGAGTTAGCCAAGATGTGACTTTGAAACCCTC	2	-	136873749-136873798	2q21.3b	Homo sapiens chemokine (C-X-C motif) receptor 4 (CXCR4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10415069] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10393923] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10644702] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10644702] [evidence TAS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IEA]; The area of a motile cell closest to the direction of movement [goid 31252] [pmid 12421915] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 10570282] [evidence TAS]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 15174142] [evidence IEP]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10942389] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10802710] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 8276799] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10802710] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10644702] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10228019] [evidence TAS]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 10583963] [evidence TAS]; The set of processes involved in the start of virus infection of cells [goid 19059] [pmid 12091904] [evidence EXP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 12421915] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12421915] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 10754293] [evidence TAS]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [pmid 9468539] [evidence NAS]; Interacting selectively with a light chain of a myosin complex [goid 32027] [pmid 12421915] [evidence IDA]	WHIM; NPY3R; NPYY3R; FB22; LAP3; LCR1; NPYR; HM89; HSY3RR; NPYRL; D2S201E; CD184; LESTR	WHIM; NPY3R; NPYY3R; FB22; LAP3; LCR1; NPYR; HM89; HSY3RR; NPYRL; D2S201E; CD184; LESTR
Homo sapiens	RefSeq	NM_001008540.1	ILMN_26451	CXCR4	NM_001008540.1	NM_001008540.1		7852	56790926	NM_001008540.1	CXCR4	NP_001008540.1	ILMN_2320888	0001300280	A	1273	TGTGAGCAGAGGGTCCAGCCTCAAGATCCTCTCCAAAGGAAAGCGAGGTG	2	-	136872491-136872540	2q21.3b	Homo sapiens chemokine (C-X-C motif) receptor 4 (CXCR4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10415069] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10393923] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10644702] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10644702] [evidence TAS]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [evidence IEA]; The area of a motile cell closest to the direction of movement [goid 31252] [pmid 12421915] [evidence IDA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 10570282] [evidence TAS]; The process that regulates the coordinated growth and sprouting of blood vessels giving rise to the organized vascular system [goid 1569] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 15174142] [evidence IEP]; Cell migration that is accomplished by extension and retraction of a pseudopodium [goid 1667] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10942389] [evidence TAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10802710] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 8276799] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 10802710] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10644702] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 10228019] [evidence TAS]; The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process by which the migration of an axon growth cone of a motor neuron is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 8045] [evidence IEA]; The orderly movement of a germ cell, a cell specialized to produce haploid gametes, through the embryo from its site of production to the place where the gonads will form [goid 8354] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 10583963] [evidence TAS]; The set of processes involved in the start of virus infection of cells [goid 19059] [pmid 12091904] [evidence EXP]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; The expansion of a T cell population by cell division. Follows T cell activation [goid 42098] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 12421915] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12421915] [evidence IPI]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 10754293] [evidence TAS]; Combining with a C-C chemokine to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif [goid 16493] [evidence IEA]; Combining with a C-X-C chemokine to initiate a change in cell activity. A C-X-C chemokine has a single amino acid between the first two cysteines of the characteristic four cysteine motif [goid 16494] [pmid 9468539] [evidence NAS]; Interacting selectively with a light chain of a myosin complex [goid 32027] [pmid 12421915] [evidence IDA]	WHIM; NPY3R; NPYY3R; FB22; LAP3; LCR1; NPYR; HM89; HSY3RR; NPYRL; D2S201E; CD184; LESTR	WHIM; NPY3R; NPYY3R; FB22; LAP3; LCR1; NPYR; HM89; HSY3RR; NPYRL; D2S201E; CD184; LESTR
Homo sapiens	RefSeq	NM_213605.1	ILMN_29277	ZNF517	NM_213605.1	NM_213605.1		340385	47106074	NM_213605.1	ZNF517	NP_998770.1	ILMN_1697773	0006760240	S	2176	CTTCTCAGCCTCCATAAGTGTGTGGGCCAGTTCGCCTAATAAATCCCCTC	8	+	146005905-146005954	8q24.3h	Homo sapiens zinc finger protein 517 (ZNF517), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	XM_941716.1	ILMN_35076	LOC652298	XM_941716.1	XM_941716.1		652298	88955132	XM_941716.1	LOC652298	XP_946809.1	ILMN_1798596	0002370524	S	3	GTGCCAAGTGGAGTTTGAGCTGGCCCACACTGCCCTCAAGCAGCTGAAGG					PREDICTED: Homo sapiens hypothetical protein LOC652298 (LOC652298), mRNA.					
Homo sapiens	RefSeq	NM_033009.1	ILMN_4352	PCBP4	NM_033009.1	NM_033009.1		57060	14670370	NM_033009.1	PCBP4	NP_127502.1	ILMN_2358842	0003170537	A	1984	AGTTCTTTCTCTCAGAGTGGGGGCAGTTTCTGGCCCAGGGGTCTGAGCTG	3	-	51966914-51966963	3p21.1e	Homo sapiens poly(rC) binding protein 4 (PCBP4), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A macromolecular complex containing both protein and RNA molecules [goid 30529] [evidence IEA]	A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the stopping or reduction in rate of the cell cycle [goid 6977] [pmid 10891498] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 10891498] [evidence IDA]; A cascade of processes initiated by the detection of DNA damage and resulting in the induction of apoptosis (programmed cell death) [goid 8630] [pmid 10891498] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10891498] [evidence IDA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10936052] [evidence NAS]	LIP4; MCG10	LIP4; MCG10
Homo sapiens	RefSeq	NM_001001916.1	ILMN_26385	OR52J3	NM_001001916.1	NM_001001916.1		119679	50054458	NM_001001916.1	OR52J3	NP_001001916.1	ILMN_1694774	0002490370	S	700	GCTCAGCTAAAAGCCCTAAGCACGTGTGGCGCTCATGTTGGAGTCATCTG	11	+	5025031-5025080	11p15.4c	Homo sapiens olfactory receptor, family 52, subfamily J, member 3 (OR52J3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-32	OR11-32
Homo sapiens	RefSeq	NM_014761.2	ILMN_3290	KIAA0174	NM_014761.2	NM_014761.2		9798	41281488	NM_014761.2	KIAA0174	NP_055576.2	ILMN_1740351	0002940196	S	2195	TCCTTCCCCACAGGGGTGGCTTTGGGATTGGATGATACAGCTTTTGCTTC	16	+	70520253-70520302	16q22.3a	Homo sapiens KIAA0174 (KIAA0174), mRNA.	A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 10942595] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]	MGC117220	MGC117220
Homo sapiens	RefSeq	NM_020361.2	ILMN_26920	CPA6	NM_020361.3	NM_020361.3		57094	141801785	NM_020361.3	CPA6	NP_065094.2	ILMN_1657295	0004390280	S	1538	CAAGGCTCAGGTCAACTGCCATAGGATTCTGAGCAAGGCCTACTTGGCCC	8	-	68497235-68497284	8q13.2a	Homo sapiens carboxypeptidase A6 (CPA6), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of C-terminal amino acid residues from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4181] [pmid 11836249] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CPAH	CPAH
Homo sapiens	RefSeq	NM_003869.4	ILMN_171280	CES2	NM_003869.4	NM_003869.4		8824	37622884	NM_003869.4	CES2	NP_003860.2	ILMN_2362681	0003850471	A	3332	CCCCTAATCCCAGCACTTTTGGGAGGTCAAGGTGAGCAGAACACCTGAGG	16	+	65535889-65535938	16q22.1a	Homo sapiens carboxylesterase 2 (intestine, liver) (CES2), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 9144407] [evidence TAS]; The volume enclosed by the membranes of the endoplasmic reticulum [goid 5788] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of substances, including the breakdown of carbon compounds with the liberation of energy for use by the cell or organism [goid 9056] [pmid 9169443] [evidence TAS]	Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [pmid 9169443] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	iCE; CE-2; CES2A1; PCE-2	iCE; CE-2; CES2A1; PCE-2
Homo sapiens	RefSeq	NM_024881.4	ILMN_23168	SLC35E1	NM_024881.4	NM_024881.4		79939	164607127	NM_024881.4	SLC35E1	NP_079157.3	ILMN_3251379	0000990603	S	4784	GCCCCTACCACAAAGGGGCCAGATCCGTTCAAGTGAGGAAGCACTTGCAG	19	-	16660907-16660956	19p13.11f	Homo sapiens solute carrier family 35, member E1 (SLC35E1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC44954; FLJ14251; DKFZp564G0462; FLJ36689	MGC44954; FLJ14251
Homo sapiens	RefSeq	NM_006686.2	ILMN_19786	ACTL7B	NM_006686.2	NM_006686.2		10880	11761637	NM_006686.2	ACTL7B	NP_006677.1	ILMN_1796088	0007550092	S	1010	CCAACGTGCTACTGTGTGGCGGCTGCACTATGCTGGATGGCTTCCCCGAG	9	-	110656972-110657021	9q31.3a	Homo sapiens actin-like 7B (ACTL7B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 10373328] [evidence TAS]		The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 10373328] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_000049.2	ILMN_10596	ASPA	NM_000049.2	NM_000049.2		443	73622272	NM_000049.2	ASPA	NP_000040.1	ILMN_1692824	0003140209	S	948	ACTCTTGATGGGAAGACGATCCCACTGGGCGGAGACTGTACCGTGTACCC	17	+	3348980-3349029	17p13.3a	Homo sapiens aspartoacylase (Canavan disease) (ASPA), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid [goid 6533] [pmid 8252036] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid [goid 4046] [pmid 8252036] [evidence TAS]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Catalysis of the reaction: N-acyl-L-aspartate + H2O = a fatty acid anion + L-aspartate [goid 19807] [evidence IEA]	ASP; ACY2	ASP; ACY2
Homo sapiens	RefSeq	XM_001724725.1	ILMN_334202	LOC100130696	XM_001724725.1	XM_001724725.1		100130696	169201164	XM_001724725.1	LOC100130696	XP_001724777.1	ILMN_3175797	0004200632	A	1463	GGCACTCTGGGGAGCTGAGGCAGAAGGATAGTTTGAGTCCAGGAGTTTGA				10q23.33d	PREDICTED: Homo sapiens hypothetical protein LOC100130696 (LOC100130696), mRNA.					
Homo sapiens	RefSeq	NM_000413.1	ILMN_21269	HSD17B1	NM_000413.1	NM_000413.1		3292	4504500	NM_000413.1	HSD17B1	NP_000404.1	ILMN_1773623	0003610129	S	2037	GCTGTGGGTGGCTAATTAAGATAGATCGCGTTAGCCAGTTTTACCAGCGC	17	+	37960564-37960613	17q21.31a	Homo sapiens hydroxysteroid (17-beta) dehydrogenase 1 (HSD17B1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8547176] [evidence TAS]	The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants [goid 6703] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: estradiol-17-beta + NADP+ = estrone + NADPH + H+ [goid 4303] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC138140; EDHB17; HSD17; EDH17B2	EDHB17; HSD17; EDH17B2; MGC138140
Homo sapiens	RefSeq	XM_945283.1	ILMN_44185	LOC652204	XM_945283.1	XM_945283.1		652204	88948877	XM_945283.1	LOC652204	XP_950376.1	ILMN_1778632	0001260184	S	61	ACCTTCCTAGACAGTAACGCCTTTCTACCTTGGCCTGCCATTTAGGGGTC					PREDICTED: Homo sapiens hypothetical protein LOC652204 (LOC652204), mRNA.					
Homo sapiens	Unigene	Hs.570107	ILMN_122288	HS.570107	Hs.570107		Hs.570107		18980101	BM670204			ILMN_1824589	0001990424	S	618	GGCCACAACTTCCTTAGTACTGTGCTGGGGTTCTGAAGGGGTCCAGGTGC	2	-	131057602-131057651		UI-E-DW1-ahc-b-12-0-UI.s1 UI-E-DW1 Homo sapiens cDNA clone UI-E-DW1-ahc-b-12-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015975.4	ILMN_167808	TAF9B	NM_015975.4	NM_015975.4		51616	85062626	NM_015975.4	TAF9B	NP_057059.2	ILMN_2057359	0003460484	S	2645	AGGAATTATTGCATTTGTTCCAAGGTTAATAAAAATTTGAGCTTAAAAAA	X	-	77281830-77281835:77385245-77385288	Xq21.1a	Homo sapiens TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa (TAF9B), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters [goid 5669] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter [goid 6352] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	TFIID-31; DN-7; DN7; TAFII31L; TAF9L	DN7; TAFII31L; TAF9L; TFIID-31; DN-7
Homo sapiens	RefSeq	XM_939859.1	ILMN_34063	LOC650780	XM_939859.1	XM_939859.1		650780	89037603	XM_939859.1	LOC650780	XP_944952.1	ILMN_1747525	0000360564	S	1891	GGGCAGCAGGAAGGAGAAGTGCCAGCAGGGGAAGTGCCAGACACGTATAA					PREDICTED: Homo sapiens similar to Immunoglobulin omega chain precursor (VpreB2 protein) (LOC650780), mRNA.					
Homo sapiens	RefSeq	XR_016057.2	ILMN_167748	LOC729859	XR_016057.2	XR_016057.2		729859	169163203	XR_016057.2	LOC729859		ILMN_3235539	0002340437	S	935	TGGGGCTGTCTTCCAGTGAAGGGGACATCCCATACGTAGTTTTGAGAGGG	2	+	88054079-88054128	2p11.2d	PREDICTED: Homo sapiens misc_RNA (LOC729859), miscRNA.					
Homo sapiens	RefSeq	XM_173015.3	ILMN_46306	LOC256483	XM_945643.2	XM_945643.2		256483	113412218	XM_945643.2	LOC256483	XP_950736.1	ILMN_1666263	0006660075	A	504	GATCTGTAAGCCAGCCCATCTCTCAAGGCCACTCCAACCTCCCTTCTCAG				1p31.1f	PREDICTED: Homo sapiens hypothetical LOC256483 (LOC256483), mRNA.					
Homo sapiens	RefSeq	NM_003720.2	ILMN_15773	PSMG1	NM_003720.2	NM_003720.2		8624	44680112	NM_003720.2	PSMG1	NP_003711.1	ILMN_1779264	0002450136	I	531	CTGTCAGTGCAGTTGCTATGTTGCAGAAGATCAACAGTATCAGTGGCTGG	21	-	40551854-40551903	21q22.2a	Homo sapiens proteasome (prosome, macropain) assembly chaperone 1 (PSMG1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15670775] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15590417] [evidence IDA]	The aggregation, arrangement and bonding together of a mature, active proteasome complex [goid 43248] [pmid 16251969] [evidence IDA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16251969] [evidence IPI]	C21LRP; PAC1; DSCR2; LRPC21	C21LRP; PAC1; DSCR2; LRPC21
Homo sapiens	RefSeq	XM_001718124.1	ILMN_340266	LOC100134057	XM_001718124.1	XM_001718124.1		100134057	169210338	XM_001718124.1	LOC100134057	XP_001718176.1	ILMN_3239841	0000160450	S	851	AGAAATTCTACAGCCAAACCCTGGTGTTTCAGATTGCCCAGAGTGTCTAG					PREDICTED: Homo sapiens similar to hydrocephalus inducing (LOC100134057), mRNA.					
Homo sapiens	RefSeq	NM_004284.2	ILMN_7932	CHD1L	NM_004284.3	NM_004284.3		9557	148612869	NM_004284.3	CHD1L	NP_004275.3	ILMN_1786016	0005870148	S	2740	AGACAGCTGGTGCCTTAAGAATTGGCCCAGCCTCAGATCCTGTCTTTAGC	1	+	145233797-145233814:145233815-145233846	1q21.1c	Homo sapiens chromodomain helicase DNA binding protein 1-like (CHD1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ALC1; CHDL; FLJ22530	ALC1; CHDL; FLJ22530
Homo sapiens	RefSeq	NM_001142651.1	ILMN_371521	NEURL1B	NM_001142651.1	NM_001142651.1		54492	217416387	NM_001142651.1	NEURL1B	NP_001136123.1	ILMN_3245983	0004610403	S	6041	GGAGGGGGGCTAGCATACGTGGTAGGGTTCTAGAAATCTGTGGTCATCGC	5	+	172118167-172118216	5q35.1e	Homo sapiens neuralized homolog 1B (Drosophila) (NEURL1B), mRNA.					
Homo sapiens	RefSeq	NM_020297.1	ILMN_27550	ABCC9	NM_020297.1	NM_020297.1		10060	10947121	NM_020297.1	ABCC9	NP_064693.1	ILMN_1751453	0004490093	I	4516	CGAGTACACACTATTCTGACGGCAGACCTGGTTATTGTGATGAAGCGAGG	12	-	21845329-21845378	12p12.1e	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (ABCC9), transcript variant SUR2B, mRNA.	A protein complex that comprises four pore-forming (Kir6.x) and four regulatory sulphonylurea receptor (SURx) subunits and forms a transmembrane channel through which ions may pass. The opening and closing of the channel is regulated by ATP: binding of ATP to the Kir6.2 subunit inhibits channel activity, whereas binding of Mg2+-complexed ATP or ADP to the SUR1 subunit stimulates channel activity [goid 8282] [evidence ISS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions into a cell or organelle [goid 10107] [evidence ISS]; Reactions triggered in response to the presence of a virus that act to protect the cell or organism [goid 51607] [pmid 18026101] [evidence IMP]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 8826984] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [pmid 8826984] [evidence TAS];  [goid 15459] [evidence ISS]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with sulfonylurea to initiate a change in cell activity [goid 8281] [evidence IEA]	ABC37; FLJ36852; SUR2; CMD1O	ABC37; FLJ36852; SUR2; CMD1O
Homo sapiens	RefSeq	XM_371208.3	ILMN_178965	FAM132A	NM_001014980.1	NM_001014980.1		388581	121949745	NM_001014980.1	FAM132A	NP_001014980.1	ILMN_1662949	0002490563	A	711	CGGGACGTGGTGTGTGTTCTCATCTGTATTGAGTCCCTGTGCCAGCGCCA	1	-	1178444-1178493	1p36.33a	Homo sapiens family with sequence similarity 132, member A (FAM132A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC105127; C1QDC2	
Homo sapiens	RefSeq	NM_014551.3	ILMN_14918	NCAPH2	NM_014551.4	NM_014551.4		29781	148368986	NM_014551.4	NCAPH2	NP_055366.3	ILMN_1712375	0004120360	I	1291	AGTCGGGCTGGTAGGAGGGAGTGTCTGGAGGCCATTGCTGCCTCCCTCAA	22	+	49304923-49304972	22q13.33b	Homo sapiens non-SMC condensin II complex, subunit H2 (NCAPH2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]		MGC18000; CAP-H2; MGC8640; MGC5305; hCAP-H2; MGC2455; 384D8-2; MGC15858; 384D8_6; MGC4133	MGC18000; CAP-H2; MGC8640; MGC5305; hCAP-H2; MGC2455; 384D8-2; MGC15858; 384D8_6; MGC4133
Homo sapiens	RefSeq	NM_022778.2	ILMN_29028	CCDC21	NM_022778.2	NM_022778.2		64793	40538793	NM_022778.2	CCDC21	NP_073615.2	ILMN_1812489	0005310348	S	3761	TGCTTAAAGGCAGAGCCGCCTGGTTGGTCTCCACCCTGTGCATTGGGAGC	1	+	26477712-26477761	1p36.11b	Homo sapiens coiled-coil domain containing 21 (CCDC21), mRNA.				FLJ22000; FLJ13976; DKFZP434L0117; DKFZp434P232	FLJ22000; FLJ13976; DKFZP434L0117; DKFZp434P232
Homo sapiens	RefSeq	XM_001723511.1	ILMN_337546	LOC100133086	XM_001723511.1	XM_001723511.1		100133086	169161413	XM_001723511.1	LOC100133086	XP_001723563.2	ILMN_3237887	0002600730	S	322	TTTGCAGGGACAGTGCAGCAGGCAGCCAGGGACAAGACTGCACGGCAGCG	1	+	147131401-147131450	1q21.1e	PREDICTED: Homo sapiens hypothetical LOC100133086 (LOC100133086), mRNA.					
Homo sapiens	RefSeq	XM_938400.1	ILMN_32173	LOC142937	XM_938400.1	XM_938400.1		142937	89031734	XM_938400.1	LOC142937	XP_943493.1	ILMN_1701230	0000020280	A	597	AGACAGGACACTTCGCTGGCCTTTCCTGGCCTCATACTTGTCACTCGGTG					PREDICTED: Homo sapiens hypothetical protein BC008131 (LOC142937), mRNA.					
Homo sapiens	Unigene	Hs.128032	ILMN_76538	HS.128032	Hs.128032		Hs.128032		5765039	AI968221			ILMN_1867014	0001570068	S	406	AGCTCCTGGTCACCCTCAAGCTGAAATGTTAGACGCGGAGGGCTGGCTTC	5	+	1909596-1909645		wu14e10.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2516970 3, mRNA sequence					
Homo sapiens	RefSeq	XM_495835.2	ILMN_174999	FAM22C	XM_001125950.1	XM_001125950.1		727807	113421628	XM_001125950.1	FAM22C	XP_001125950.2	ILMN_1748809	0005290170	S	4415	CAAGAAGCGACCTCTCTTTGGAAGCTTGTCCCCTGCTGAAAAGACACCCC	10	+	81462252-81462301	10q22.3f	PREDICTED: Homo sapiens family with sequence similarity 22, member C (FAM22C), mRNA.					
Homo sapiens	RefSeq	XM_375148.3	ILMN_35241	LOC400299	XM_375148.3	XM_375148.3		400299	89077057	XM_375148.3	LOC400299	XP_375148.3	ILMN_1728091	0000150253	S	88	GGCCGCAGGTTGATATGGACCACTTCCAATAACAGCATACAGGTTCCCCG					PREDICTED: Homo sapiens similar to Ribosome biogenesis protein BMS1 homolog (LOC400299), mRNA.					
Homo sapiens	RefSeq	NM_025219.1	ILMN_25099	DNAJC5	NM_025219.1	NM_025219.1		80331	45504381	NM_025219.1	DNAJC5	NP_079495.1	ILMN_1789642	0004040703	S	2807	AGTGGGGTGCCTCCGTGCCGCTTCGTGCAGCAGCAAGTTCAGCCTGAGAT	20	+	62035405-62035454	20q13.33e	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 5 (DNAJC5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]	CSP; DKFZP434N1429; FLJ13070; DKFZp761N1221; FLJ00118	CSP; DKFZP434N1429; FLJ13070; DKFZp761N1221; FLJ00118
Homo sapiens	RefSeq	NM_144569.3	ILMN_6339	SPOCD1	NM_144569.4	NM_144569.4		90853	142366582	NM_144569.4	SPOCD1	NP_653170.3	ILMN_1784948	0002120537	S	3756	TGAAGCCTGTTCCAGAGAGAGGTGGGACTGCAAGGAGAGGATGGTCAGCC	1	-	32256107-32256156	1p35.2a	Homo sapiens SPOC domain containing 1 (SPOCD1), mRNA.		The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]		FLJ39908; FLJ25348; RP11-84A19.1	FLJ39908; FLJ25348; RP11-84A19.1
Homo sapiens	RefSeq	NM_006498.2	ILMN_19736	LGALS2	NM_006498.2	NM_006498.2		3957	51173752	NM_006498.2	LGALS2	NP_006489.1	ILMN_1687306	0006280086	S	288	CATTGGACGGCAGCAACTGGGGGCAAGAACAACGGGAAGATCACCTGTGC	22	-	37966606-37966655	22q13.1a	Homo sapiens lectin, galactoside-binding, soluble, 2 (LGALS2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]		Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	HL14; MGC75071	HL14; MGC75071
Homo sapiens	RefSeq	NM_144595.2	ILMN_165142	SLAIN1	NM_001040153.2	NM_001040153.2		122060	98961139	NM_001040153.2	SLAIN1	NP_001035243.1	ILMN_1746784	0000150019	S	2088	CGGCATCATGAGCTCATTGCACTTAATACCTGCAATGTTTGCTACTGTAC	13	+	77236092-77236141	13q22.3b	Homo sapiens SLAIN motif family, member 1 (SLAIN1), transcript variant 1, mRNA.				C13orf32; MGC131899; FLJ30046	
Homo sapiens	Unigene	Hs.581657	ILMN_133838	HS.581657	Hs.581657		Hs.581657		82326721	DA896354			ILMN_1913235	0007560477	S	49	TCAGTCCTGGGAGAGGGACAGAGAAAACAGGTGGGGCATTCACGGTGGTC	3	+	195907612-195907661		DA896354 SKMUS2 Homo sapiens cDNA clone SKMUS2004129 5, mRNA sequence					
Homo sapiens	RefSeq	NM_016410.2	ILMN_21129	CHMP5	NM_016410.2	NM_016410.2		51510	20127557	NM_016410.2	CHMP5	NP_057494.2	ILMN_2094166	0006450326	S	60	TTTCTTCGCGGCTGCTCAAGATGAACCGACTCTTCGGGAAAGCGAAACCC	9	+	33255059-33255076:33255077-33255108	9p13.3e	Homo sapiens chromatin modifying protein 5 (CHMP5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate, or extent of receptor recyling [goid 1919] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a lysosome. A lysosome is a cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases [goid 7040] [evidence IEA]; The directed movement of substances from endosomes to lysosomes [goid 8333] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	C9orf83; SNF7DC2; CGI-34; PNAS-2; HSPC177	C9orf83; SNF7DC2; CGI-34; PNAS-2; HSPC177
Homo sapiens	RefSeq	NM_139313.1	ILMN_23566	YME1L1	NM_139313.1	NM_139313.1		10730	21327686	NM_139313.1	YME1L1	NP_647474.1	ILMN_2339825	0001400468	A	1795	CTGTTGGCTTTTCCGGAGCAGAGTTGGAGAATCTTGTGAACCAGGCTGCA	10	-	27448304-27448353	10p12.1a	Homo sapiens YME1-like 1 (S. cerevisiae) (YME1L1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]	YME1L; MEG4; PAMP; FTSH	YME1L; MEG4; PAMP; FTSH
Homo sapiens	RefSeq	NM_003759.1	ILMN_24724	SLC4A4	NM_003759.2	NM_003759.2		8671	148596978	NM_003759.2	SLC4A4	NP_003750.1	ILMN_1734897	0005130053	S	6903	GCTCTTCACAGCATGAGCATGAAGCCCAGTGGCACCAAATGGCTGGGTAC	4	+	72655922-72655971	4q13.3b	Homo sapiens solute carrier family 4, sodium bicarbonate cotransporter, member 4 (SLC4A4), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9235899] [evidence TAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]	The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA];  [goid 5452] [evidence IEA]; Catalysis of the transfer of a negatively charged ion from one side of a membrane to the other [goid 8509] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + HCO3-(out) = Na+(in) + HCO3-(in) [goid 8510] [pmid 9651366] [evidence TAS]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	KNBC; pNBC; NBC2; NBC1; hhNMC; HNBC1; SLC4A5; DKFZp781H1314	KNBC; pNBC; NBC2; NBC1; hhNMC; HNBC1; SLC4A5; DKFZp781H1314
Homo sapiens	RefSeq	XM_935564.1	ILMN_43808	LOC641805	XM_935564.1	XM_935564.1		641805	89027340	XM_935564.1	LOC641805	XP_940657.1	ILMN_1780772	0004640280	S	3	GGATGGCTCTAGCCCTTATCCACCCCCTCAAGCATTTATTAAGCATCTGC					PREDICTED: Homo sapiens similar to PMS1 protein homolog 2 (DNA mismatch repair protein PMS2) (LOC641805), mRNA.					
Homo sapiens	RefSeq	NM_003854.2	ILMN_21537	IL1RL2	NM_003854.2	NM_003854.2		8808	28416901	NM_003854.2	IL1RL2	NP_003845.2	ILMN_1762810	0002060328	S	1833	GTGTACTCTCACGACTGGCTAAGACTTGCTGGACTGACACCTATGGCTGG	2	+	102222112-102222133:102222134-102222161	2q12.1a	Homo sapiens interleukin 1 receptor-like 2 (IL1RL2), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1833184] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane [goid 31224] [evidence IEA]	A defense response that is mediated by cells [goid 6968] [pmid 8332913] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1833184] [evidence TAS]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA];  [goid 4909] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with interleukin-1 to initiate a change in cell activity. Interleukin-1 is produced mainly by activated macrophages and is involved in the inflammatory response [goid 4908] [evidence IEA]	IL1RRP2; IL1R-rp2	IL1RRP2; IL1R-rp2
Homo sapiens	RefSeq	XM_937769.1	ILMN_43006	LOC646249	XM_937769.2	XM_937769.2		646249	113414250	XM_937769.2	LOC646249	XP_942862.1	ILMN_1668990	0002490524	S	473	TGCCTGCTGTCCTCCAGTCAGCTGAAGGCCAAGGGCGAACTGAGCTTCGA				2q34e	PREDICTED: Homo sapiens similar to Protein FAM113A (LOC646249), mRNA.					
Homo sapiens	RefSeq	NM_207015.1	ILMN_173997	NAALADL2	NM_207015.2	NM_207015.2		254827	126157507	NM_207015.2	NAALADL2	NP_996898.2	ILMN_1808795	0000990537	S	4339	GAGGTGGGAATACACAAGCAGGTGCATGTAAGCCCAAAAGCTAGAAAGCC	3	+	175522855-175522904	3q26.31c-q26.31d	Homo sapiens N-acetylated alpha-linked acidic dipeptidase-like 2 (NAALADL2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_016207.2	ILMN_21951	CPSF3	NM_016207.2	NM_016207.2		51692	21314666	NM_016207.2	CPSF3	NP_057291.1	ILMN_2087528	0005720564	S	1941	AGCGTCACAGTGGACGGGAAAACTGCCAACCTTAACTTGGAGACACGGAC	2	+	9528972-9529019:9530496-9530497	2p25.1e-p25.1d	Homo sapiens cleavage and polyadenylation specific factor 3, 73kDa (CPSF3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7969155] [evidence TAS]	The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [pmid 12226669] [evidence EXP]; The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript [goid 6378] [pmid 8929409] [evidence TAS]; Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 8929409] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	CPSF; CPSF73; CPSF-73	CPSF; CPSF73; CPSF-73
Homo sapiens	RefSeq	NR_030304.1	ILMN_388025	MIR578	NR_030304.1	NR_030304.1		693163	262205861	NR_030304.1	MIR578		ILMN_3310995	0004210070	S	22	CAATCCCGGACAACAAGAAGCTCCTATAGCTCCTGTAGCTTCTTGTGCTC				4q32.3b	Homo sapiens microRNA 578 (MIR578), microRNA.					
Homo sapiens	RefSeq	XM_925880.1	ILMN_43736	LOC642347	XM_925880.1	XM_925880.1		642347	88974827	XM_925880.1	LOC642347	XP_930973.1	ILMN_1740644	0002030021	S	53	TATCAAGGATTCATCATGATCAGCCAACGAAGCCCCGGGATCAAGCGGTC	4	-	69761842-69761891		PREDICTED: Homo sapiens similar to UDP-glucuronosyltransferase 2B7 precursor (UDPGT) (3,4-catechol estrogen specific) (UDPGTh-2) (LOC642347), mRNA.					
Homo sapiens	RefSeq	NM_177559.2	ILMN_30267	CSNK2A1	NM_177559.2	NM_177559.2		1457	47419901	NM_177559.2	CSNK2A1	NP_808227.1	ILMN_1679501	0006560347	I	174	CAAGGCTTGTCAAGCAGTGTGCTCATCACATGGTAAATCATGCAGCGTGG	20	-	508637-508686	20p13f	Homo sapiens casein kinase 2, alpha 1 polypeptide (CSNK2A1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10799509] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10799509] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 2174700] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 2174700] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 2174700] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11972058] [evidence IPI]	CKII alpha; CK2A1; CKII	CKII alpha; CK2A1; CKII
Homo sapiens	RefSeq	XM_371250.4	ILMN_30631	LOC388630	XM_371250.4	XM_371250.4		388630	88942706	XM_371250.4	LOC388630	XP_371250.4	ILMN_1777905	0007320736	A	1979	GCCACCTCTACCACCCACCTCAGCTTGTCTGTCACCAAAGTCCTGCTGTG	1	-	48012773-48012822	1p33c	PREDICTED: Homo sapiens similar to C05G5.5 (LOC388630), mRNA.					
Homo sapiens	RefSeq	NM_017717.3	ILMN_27778	MUPCDH	NM_021924.3	NM_021924.3		53841	110618247	NM_021924.3	MUPCDH	NP_068743.2	ILMN_1724805	0003850328	A	1272	CCCGGAGTTCTCGGACCTCAACTCGGCCATCACATATCGAATTACCAACC	11	-	619550-619587:619681-619692	11p15.5d	Homo sapiens mucin-like protocadherin (MUPCDH), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence NAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MU-PCDH; FLJ20219; MUCDHL	MU-PCDH; FLJ20219
Homo sapiens	RefSeq	NM_017717.3	ILMN_27778	MUPCDH	NM_021924.3	NM_021924.3		53841	110618247	NM_021924.3	MUPCDH	NP_068743.2	ILMN_1744293	0002760598	I	3162	ACATGCTTGGGTTGGAGCGCAGCAGTAAACACCCTGCCCAGTGACCTGGA	11	-	616782-616831	11p15.5d	Homo sapiens mucin-like protocadherin (MUPCDH), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence ISS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules that require the presence of calcium for the interaction [goid 16339] [evidence NAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	MU-PCDH; FLJ20219; MUCDHL	MU-PCDH; FLJ20219
Homo sapiens	RefSeq	XM_926273.1	ILMN_32190	LOC647361	XM_936430.2	XM_936430.2		647361	113415418	XM_936430.2	LOC647361	XP_941523.1	ILMN_1652230	0006840170	S	27	CCACGCGCGAAAATTCGGCCAGGGTTCTCGCTCTTGTCGCGTCTGCTCAA					PREDICTED: Homo sapiens similar to 40S ribosomal protein S29 (LOC647361), mRNA.					
Homo sapiens	Unigene	Hs.383921	ILMN_89010	HS.383921	Hs.383921		Hs.383921		5689786	AL109688			ILMN_1864228	0007200072	S	146	CACAGACACCACAAGCTCAGGAGGCTGCATCAGCGTTTCTTATTGGAGGC	15	-	79785896-79785945		Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 131775					
Homo sapiens	RefSeq	XM_001720130.1	ILMN_340842	LOC152225	XM_001720130.1	XM_001720130.1		152225	169165939	XM_001720130.1	LOC152225	XP_001720182.1	ILMN_3282764	0006290201	M	224	GTGCAGTATATGGAAATAAGTTTTATTACCTTCTTCCCACATTAACTCAT				3q12.3b	PREDICTED: Homo sapiens hypothetical protein LOC152225 (LOC152225), mRNA.					
Homo sapiens	RefSeq	XR_041485.1	ILMN_339205	C13ORF29	XR_041485.1	XR_041485.1		283487	169205715	XR_041485.1	C13orf29		ILMN_3181474	0004180092	A	170	CAGAGGAACACGTCATGGAGACGGACCGAGTTGAAGGAGCCAGGGATGGT	13	-	110319919-110319968	13q34a	PREDICTED: Homo sapiens misc_RNA (C13orf29), miscRNA.					
Homo sapiens	RefSeq	XR_039978.1	ILMN_341623	C11ORF44	XR_039978.1	XR_039978.1		283171	169202072	XR_039978.1	C11orf44		ILMN_3307188	0001990369	A	251	AGCTGGATGAGATGGAAGAGATCCCCAGAGAGAGCCAGTGTGGGAGGCAG	11	+	130088318-130088367	11q24.3c	PREDICTED: Homo sapiens chromosome 11 open reading frame 44 (C11orf44), miscRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]				
Homo sapiens	RefSeq	NM_032389.3	ILMN_12944	ARFGAP2	NM_032389.3	NM_032389.3		84364	52851449	NM_032389.3	ARFGAP2	NP_115765.2	ILMN_1769250	0003190066	S	2624	TCCCAAGCAACACAGACCACTCTTCCCCTTGCCCCTCCCCCAGAGGGACT	11	-	47185940-47185989	11p11.2b	Homo sapiens ADP-ribosylation factor GTPase activating protein 2 (ARFGAP2), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]; Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	Zfp289; FLJ26000; FLJ14576; ZNF289; IRZ; Nbla10535	Zfp289; FLJ26000; FLJ14576; ZNF289; IRZ; Nbla10535
Homo sapiens	RefSeq	NM_004876.2	ILMN_29120	ZNF254	NM_004876.2	NM_004876.2		9534	116256442	NM_004876.2	ZNF254	NP_004867.2	ILMN_2350357	0000540095	A	1103	ATGGGAAAAATTTGGCAAAGCCTTTAATCGGTCCTCGCACCTCACCACAG				19p12b	Homo sapiens zinc finger protein 254 (ZNF254), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10585455] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	ZNF91L; BMZF-5; HD-ZNF1; ZNF539	ZNF91L; BMZF-5; HD-ZNF1
Homo sapiens	RefSeq	XM_944536.1	ILMN_137387	DNAJB12	XM_944536.1	XM_944536.1		54788	89031974	XM_944536.1	DNAJB12	XP_949629.1	ILMN_1789424	0002000202	I	1861	CCTGCAACTGGAGAGATGTGAGGAGCAGAGGACTAGGGCAGGGACTGTTG				10q22.1f	PREDICTED: Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 12, transcript variant 2 (DNAJB12), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]		
Homo sapiens	RefSeq	NM_152536.2	ILMN_13122	FGD5	NM_152536.2	NM_152536.2		152273	50080161	NM_152536.2	FGD5	NP_689749.2	ILMN_2104141	0003710554	S	5183	CTGGTCTTGGCAGATGGCTCTGGGAACAGCGAGGGAGCACAGAAGTCGTG	3	+	14950699-14950748	3p24.3e	Homo sapiens FYVE, RhoGEF and PH domain containing 5 (FGD5), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [evidence ISS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence ISS]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence ISS]; Any process that modulates the surface configuration of a cell [goid 8360] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence ISS]; Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]; Any process that modulates the activity of the GTPase Cdc42 [goid 43088] [evidence ISS]; The assembly of a filopodium, a very long microspike extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or by the growth cone of a developing nerve cell axon [goid 46847] [evidence ISS]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence ISS]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a small monomeric GTPase [goid 31267] [evidence ISS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZFYVE23	ZFYVE23
Homo sapiens	RefSeq	NM_001002761.1	ILMN_16333	BPY2	NM_004678.1	NM_004678.1		9083	4757863	NM_004678.1	BPY2	NP_004669.1	ILMN_1655210	0007330187	S	181	CTGTCACATCACCAAGATTATATTGTATCACTGGACCAGCATAAAGCTGA	Y	+	23543318-23543367	Yq11.223c	Homo sapiens basic charge, Y-linked, 2 (BPY2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12724276] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12724276] [evidence IMP]; The union of male and female gametes to form a zygote [goid 7338] [pmid 9381176] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14627543] [evidence IPI]; Interacting selectively with a HECT, 'Homologous to the E6-AP Carboxyl Terminus', domain of a protein [goid 32399] [pmid 12207887] [evidence IPI]	VCY2; VCY2A; BPY2A	VCY2; BPY2; VCY2C
Homo sapiens	RefSeq	NM_004678.1	ILMN_16333	BPY2	NM_004678.1	NM_004678.1		9083	4757863	NM_004678.1	BPY2	NP_004669.1	ILMN_1798112	0007330450	S	619	CTGGCTCAGTGTCGAAGCCCAGATCACAGAAGTAATTGTGCCATATGTGG	Y	+	23553077-23553094:23553787-23553803:23553804-23553818	Yq11.223c	Homo sapiens basic charge, Y-linked, 2 (BPY2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12724276] [evidence IDA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12724276] [evidence IMP]; The union of male and female gametes to form a zygote [goid 7338] [pmid 9381176] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14627543] [evidence IPI]; Interacting selectively with a HECT, 'Homologous to the E6-AP Carboxyl Terminus', domain of a protein [goid 32399] [pmid 12207887] [evidence IPI]	VCY2; VCY2A; BPY2A	VCY2; VCY2A; BPY2A
Homo sapiens	RefSeq	NM_032042.4	ILMN_364932	FAM172A	NM_032042.4	NM_032042.4		83989	196162719	NM_032042.4	FAM172A	NP_114431.2	ILMN_3241099	0007150739	S	3884	CCAGCGTTGGTAGTAGCCCACCTGCATGAGGACGGCCAGTGTTAACAATA				5q15a-q15b	Homo sapiens family with sequence similarity 172, member A (FAM172A), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]				
Homo sapiens	Unigene	Hs.257688	ILMN_83671	HS.257688	Hs.257688		Hs.257688		7037677	AW467571			ILMN_1915501	0002490608	S	130	GCCAAGTCCTACCAGTATCCTCTGACCTCTGTGCCAAATCACGCTTCTGG	15	+	41312209-41312258		he21f02.x1 NCI_CGAP_CML1 Homo sapiens cDNA clone IMAGE:2919675 3, mRNA sequence					
Homo sapiens	RefSeq	NM_033201.1	ILMN_20964	C16ORF45	NM_033201.1	NM_033201.1		89927	24308353	NM_033201.1	C16orf45	NP_149978.1	ILMN_1687821	0005260025	S	1586	AGAGTAGATGCTGACCTGGGCACTCCACCATTCCGGGGCACCACAGAGAT	16	+	15588972-15589021	16p13.11b	Homo sapiens chromosome 16 open reading frame 45 (C16orf45), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ32618	FLJ32618
Homo sapiens	RefSeq	NM_016603.1	ILMN_24500	C5ORF5	NM_016603.1	NM_016603.1		51306	7706136	NM_016603.1	C5orf5	NP_057687.1	ILMN_1673478	0005900544	S	5251	GGCAGCACTTATGCTCTGTGACAGTATTGTGTGTCATAGTTGAGCAGTAG	5	-	137301712-137301761	5q31.2c	Homo sapiens chromosome 5 open reading frame 5 (C5orf5), mRNA.				KHCHP; MGC57159; DKFZp667F249; N61	KHCHP; MGC57159; DKFZp667F249; N61
Homo sapiens	RefSeq	XM_938758.1	ILMN_138643	WDR5	XM_938758.1	XM_938758.1		11091	89030586	XM_938758.1	WDR5	XP_943851.1	ILMN_1678653	0005290091	I	142	CCGGGACCTGTGTTTTTCCTGCCCTGGAGCTTCTGCTACTGCTTGTCTGC				9q34.2b	PREDICTED: Homo sapiens WD repeat domain 5 (WDR5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12670868] [evidence IPI]		
Homo sapiens	RefSeq	NM_014728.1	ILMN_161965	FRMPD4	NM_014728.1	NM_014728.1		9758	55741444	NM_014728.1	FRMPD4	NP_055543.1	ILMN_1754018	0001780615	S	5730	GACACTCAACCACCATGGCCGCTCTCGTAAGCACACTGACACGTTCTCTC	X	+	12649828-12649877	Xp22.2	Homo sapiens FERM and PDZ domain containing 4 (FRMPD4), mRNA.	Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC142260; PDZD10; PDZK10; KIAA0316; MGC142262	MGC142260; PDZD10; PDZK10; KIAA0316; MGC142262
Homo sapiens	Unigene	Hs.190092	ILMN_81044	HS.190092	Hs.190092		Hs.190092		27880335	BX116001			ILMN_1870747	0003440291	S	236	AACTCCTGGTTCACGAAGACACACAGCGTCCACGAGCAGGGGGCTGCGCA	1	+	242961184-242961233		BX116001 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998K071782, mRNA sequence					
Homo sapiens	RefSeq	NM_003634.1	ILMN_172225	NIPSNAP1	NM_003634.1	NM_003634.1		8508	4505398	NM_003634.1	NIPSNAP1	NP_003625.1	ILMN_1805916	0005490131	S	2030	CTCCCCTAATTGACATTCTATCAGCCCAACCCTCATTCTGCAGGGCCACC	22	-	28280956-28281005	22q12.2a	Homo sapiens nipsnap homolog 1 (C. elegans) (NIPSNAP1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]				
Homo sapiens	Unigene	Hs.444092	ILMN_92649	HS.444092	Hs.444092		Hs.444092		27833218	BX104914			ILMN_1884069	0003460338	S	404	AGCCATGCTAACTGTTCCTCACACTCCCTGAGCTACCAGCCTGAGACAGG	14	+	87671986-87672035		BX104914 Soares fetal liver spleen 1NFLS Homo sapiens cDNA clone IMAGp998A02134, mRNA sequence					
Homo sapiens	RefSeq	NM_006310.2	ILMN_184074	NPEPPS	NM_006310.2	NM_006310.2		9520	15451906	NM_006310.2	NPEPPS	NP_006301.2	ILMN_2116127	0000670332	S	3796	CCCGGTTCATTTTATGCGTGCGAGAAGTCAGTGGTAACTGCTGCAGGGCT	17	+	43055258-43055307	17q21.32b	Homo sapiens aminopeptidase puromycin sensitive (NPEPPS), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9048733] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 10329370] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MP100; PSA	MP100; PSA
Homo sapiens	RefSeq	XM_945399.1	ILMN_184074	NPEPPS	NM_006310.2	NM_006310.2		9520	15451906	NM_006310.2	NPEPPS	NP_006301.2	ILMN_1723815	0005910161	I	456	GTCTTTCCCTAGTACTCTGCAAACAGGTACGGGAACCTTAAAGATAGATT	17	+	43001834-43001859:43011755-43011778	17q21.32b	Homo sapiens aminopeptidase puromycin sensitive (NPEPPS), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9048733] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 10329370] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MP100; PSA	
Homo sapiens	RefSeq	NM_006310.2	ILMN_184074	NPEPPS	NM_006310.2	NM_006310.2		9520	15451906	NM_006310.2	NPEPPS	NP_006301.2	ILMN_1680435	0006480241	S	293	AGGGCAAGCTGGAGGCCGCCGCCCAGGTGAGGCAGGCGACTAATCAGATT	17	+	42963895-42963920:42978274-42978297	17q21.32b	Homo sapiens aminopeptidase puromycin sensitive (NPEPPS), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9048733] [evidence TAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [pmid 10329370] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 8237] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MP100; PSA	MP100; PSA
Homo sapiens	RefSeq	NM_020652.1	ILMN_16483	ZNF286A	NM_020652.1	NM_020652.1		57335	10190685	NM_020652.1	ZNF286A	NP_065703.1	ILMN_1663858	0001050681	S	2389	TGCTGGGTTCAAAGTCCTTAGAATTCCCTTCCTCCCTCAACAAGCTGCTG	17	+	15561837-15561886	17p12a	Homo sapiens zinc finger protein 286A (ZNF286A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	KIAA1874; MGC156181; ZNF286; MGC149627	KIAA1874; MGC149627; MGC156181; ZNF286
Homo sapiens	RefSeq	NM_001004326.2	ILMN_11851	SLC22A20	NM_001004326.2	NM_001004326.2		440044	153792677	NM_001004326.2	SLC22A20	NP_001004326.2	ILMN_3239050	0001070670	S	1302	TACCACACTTGGGGAATACAGCACCATCCTGCCACCCGTGAGCTTTGGGG	11	+	64760795-64760844	11q13.1c	Homo sapiens solute carrier family 22, member 20 (SLC22A20), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	FLJ16331; Oat6	
Homo sapiens	RefSeq	XM_929704.2	ILMN_38582	LOC646754	XM_929704.2	XM_929704.2		646754	169202589	XM_929704.2	LOC646754	XP_934797.2	ILMN_3206531	0004640709	A	1034	TGACCCACTCCTCCAACTGGATTCTGGGAGTCTGTCGAGATTCTAGGACA	11	-	49032105-49032154	11p11.12d	PREDICTED: Homo sapiens similar to hCG1795201 (LOC646754), mRNA.					
Homo sapiens	RefSeq	XM_929704.2	ILMN_38582	LOC646754	XM_929704.2	XM_929704.2		646754	169202589	XM_929704.2	LOC646754	XP_934797.2	ILMN_3283043	0006110408	M	727	CTCCAGGATGTGGGAAATATATCGGCAAGAACTGATTTGGCACAGATGCC	11	-	49033514-49033535:49034487-49034509:49035276-49035280	11p11.12d	PREDICTED: Homo sapiens similar to hCG1795201 (LOC646754), mRNA.					
Homo sapiens	RefSeq	XM_208835.6	ILMN_174478	LOC727832	XM_001125730.1	XM_001125730.1		727832	113425023	XM_001125730.1	LOC727832	XP_001125730.1	ILMN_1744539	0005690367	S	50	CGTAGAGGTGACTGGAGGTATATACTTGTCCTCACCTGGATCATGCTGAT	15	-	19007029-19007078	15q11.2a	PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC727832), mRNA.					
Homo sapiens	RefSeq	XM_375272.3	ILMN_174478	LOC727832	XM_001125730.1	XM_001125730.1		727832	113425023	XM_001125730.1	LOC727832	XP_001125730.1	ILMN_1709339	0000110400	S	2107	TTTATTTTAAATTGTGGCAAAATACTGGCCAGGCATGGTAGCTCACGCCT	15	-	18998654-18998703	15q11.2a	PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC727832), mRNA.					
Homo sapiens	RefSeq	XM_927299.1	ILMN_39833	LOC644056	XM_927299.2	XM_927299.2		644056	113413339	XM_927299.2	LOC644056	XP_932392.1	ILMN_1745733	0001780632	S	132	ATAGGAAACGTCTCATTGCACCCTCTTTCCACACCATCTGTCTGACCTGG	2	-	174454576-174454625	2q31.1f	PREDICTED: Homo sapiens similar to Ciliary dynein heavy chain 11 (Axonemal beta dynein heavy chain 11) (LOC644056), mRNA.					
Homo sapiens	RefSeq	XM_001717030.1	ILMN_347708	LOC100128783	XM_001717030.1	XM_001717030.1		100128783	169167601	XM_001717030.1	LOC100128783	XP_001717082.1	ILMN_3267674	0002970048	M	70	TCAGCAGTGTGTGCCCACAAGAGCCAGCTCTCCCGAGCCCGTAACCTTCG	5	+	31101458-31101464:31229575-31229617	5p13.3d	PREDICTED: Homo sapiens hypothetical protein LOC100128783 (LOC100128783), mRNA.					
Homo sapiens	RefSeq	XM_015717.9	ILMN_35685	LOC149224	XM_015717.9	XM_015717.9		149224	88942861	XM_015717.9	LOC149224	XP_015717.5	ILMN_1679470	0006380487	A	56	AGCGCCAAGATCGTGAAACCCAACGGCGAGAAGCCGGAGGAGTTCGAGTC	1	-	68481264-68481313	1p31.3a	PREDICTED: Homo sapiens similar to 40S ribosomal protein S7 (S8) (LOC149224), mRNA.					
Homo sapiens	RefSeq	NM_000076.1	ILMN_20689	CDKN1C	NM_000076.1	NM_000076.1		1028	4557440	NM_000076.1	CDKN1C	NP_000067.1	ILMN_1718565	0005890653	S	1197	AAGAGGCTGCGGTGAGCCAATTTAGAGCCCAAAGAGCCCCGAGGGAACCT	11	-	2861687-2861721:2861805-2861809:2861810-2861819	11p15.4d	Homo sapiens cyclin-dependent kinase inhibitor 1C (p57, Kip2) (CDKN1C), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16943770] [evidence IDA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a neuron to attain its fully functional state [goid 42551] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 7729684] [evidence TAS]; Progression through G1 phase, one of two 'gap' phases in the mitotic cell cycle; G1 is the interval between the completion of mitosis and the beginning of DNA synthesis [goid 80] [pmid 7729684] [evidence TAS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 7729684] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity [goid 30511] [pmid 16943770] [evidence IMP]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of epithelial cell proliferation [goid 50680] [pmid 16943770] [evidence IMP]	Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Functions in the storage of nutritious substrates [goid 45735] [evidence IEA]; Stops, prevents or reduces the activity of a protein kinase, an enzyme which phosphorylates a protein [goid 4860] [evidence IEA]; Stops, prevents or reduces the activity of a cyclin-dependent protein kinase [goid 4861] [pmid 7729684] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9106657] [evidence IPI]	BWCR; p57; BWS; KIP2; WBS	BWCR; p57; BWS; KIP2; WBS
Homo sapiens	RefSeq	NM_004466.3	ILMN_17458	GPC5	NM_004466.3	NM_004466.3		2262	34106705	NM_004466.3	GPC5	NP_004457.1	ILMN_1688886	0005910491	S	2783	TGCATCTTTGGTATTGTGCCTCTGCTCCCATCTCTCTCTTTGCCTCATAG	13	+	92317385-92317434	13q31.3b-q31.3c	Homo sapiens glypican 5 (GPC5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7657705] [evidence TAS]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]				
Homo sapiens	RefSeq	NM_004396.2	ILMN_20253	DDX5	NM_004396.2	NM_004396.2		1655	13514826	NM_004396.2	DDX5	NP_004387.1	ILMN_1805344	0007610138	S	1943	GGCATATGCATATCCTGCTACTGCAGCTGCACCTATGATTGGTTATCCAA	17	-	59926525-59926574	17q24.1a	Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (DDX5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2451786] [evidence NAS]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 2451786] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the reaction: NTP + H2O = NDP + phosphate to drive the unwinding of a RNA helix [goid 3724] [pmid 1996094] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of any acid anhydride which contains phosphorus [goid 16818] [evidence IEA]	HUMP68; DKFZp686J01190; p68; HLR1; G17P1	HUMP68; DKFZp686J01190; p68; HLR1; G17P1
Homo sapiens	RefSeq	NM_003901.2	ILMN_5084	SGPL1	NM_003901.2	NM_003901.2		8879	31982935	NM_003901.2	SGPL1	NP_003892.2	ILMN_1761531	0003370273	S	4201	TGTAGAGCGTCTCCCCAGAACCAGACCCCGAGCCACTCGCTTCCTCTGTG	10	+	72309382-72309431	10q22.1c	Homo sapiens sphingosine-1-phosphate lyase 1 (SGPL1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 11018465] [evidence NAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving ceramides, any N-acylated sphingoid [goid 6672] [pmid 14570870] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 14570870] [evidence IDA]; The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-) [goid 19752] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid) [goid 30149] [pmid 11018465] [evidence NAS]	Catalysis of the reaction: sphinganine 1-phosphate = phosphoethanolamine + palmitaldehyde [goid 8117] [pmid 11018465] [evidence NAS]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]; Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound [goid 16831] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [evidence IEA]	KIAA1252; SPL; FLJ13811	SPL; KIAA1252; FLJ13811
Homo sapiens	RefSeq	XM_210581.4	ILMN_39781	LOC643482	XM_210581.4	XM_210581.4		643482	88978311	XM_210581.4	LOC643482	XP_210581.4	ILMN_1716924	0001050220	S	132	GCTGTGGCAGGAGGAGCTGACTGATCTGAAGGAAAGTGAGAACTCAGCAC	4	-	184490785-184490811:184492160-184492182		PREDICTED: Homo sapiens similar to Claudin-22 (LOC643482), mRNA.					
Homo sapiens	RefSeq	XR_037840.1	ILMN_344557	LOC100129667	XR_037840.1	XR_037840.1		100129667	169172472	XR_037840.1	LOC100129667		ILMN_3263968	0002760746	M	221	GTATTACATATGGTGTATGGGTATTGATGAGGTCATGGTATTATATATGG				8q11.23c	PREDICTED: Homo sapiens misc_RNA (LOC100129667), miscRNA.					
Homo sapiens	RefSeq	NM_002749.2	ILMN_9862	MAPK7	NM_002749.2	NM_002749.2		5598	20986496	NM_002749.2	MAPK7	NP_002740.2	ILMN_2244699	0004810010	I	78	CGCTGGGGACGGGAGGCCGGCGAGCCTCGGGACCTCTGAAAGCCTTGAGG	17	+	19222477-19222526	17p11.2e	Homo sapiens mitogen-activated protein kinase 7 (MAPK7), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 17322878] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16456541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16626623] [evidence EXP]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7646528] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of angiogenesis [goid 45765] [evidence IEA]	Catalysis of the reaction: ATP + shikimate = ADP + shikimate 3-phosphate [goid 4765] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 16626623] [evidence EXP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 7646528] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7759517] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	ERK5; ERK4; PRKM7; BMK1	ERK5; ERK4; PRKM7; BMK1
Homo sapiens	RefSeq	XR_040106.1	ILMN_351198	LOC554207	XR_040106.1	XR_040106.1		554207	169207167	XR_040106.1	LOC554207		ILMN_3294499	0001940202	M	63	TGAAATCCGGAGGTACTGGAGCAGCGCTGTATGTCCAGCATCTGGCATTG				14q11.2c	PREDICTED: Homo sapiens hypothetical LOC554207 (LOC554207), miscRNA.					
Homo sapiens	RefSeq	NM_145261.2	ILMN_834	DNAJC19	NM_145261.2	NM_145261.2		131118	41152082	NM_145261.2	DNAJC19	NP_660304.1	ILMN_1742109	0004150070	A	779	GAAGATGACAGTCCTTGCTCTCAGGGAGCCCCCACTTTAATGGGAGACTG	3	-	182184784-182184833	3q26.33b	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 19 (DNAJC19), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12592411] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 16055927] [evidence NAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 16055927] [evidence NAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 16055927] [evidence IMP]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of a protein from the cytoplasm to the mitochondrion [goid 43681] [pmid 16055927] [evidence NAS]; The process whose specific outcome is the progression of the genitalia over time, from its formation to the mature structure [goid 48806] [pmid 16055927] [evidence IMP]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	TIM14; TIMM14	TIM14; TIMM14
Homo sapiens	Unigene	Hs.308802	ILMN_85746	HS.308802	Hs.308802		Hs.308802		3960424	AI301078			ILMN_1905045	0000630441	S	262	CACAGTCTGGTGGGAGAGACAGATACACAAGTCAGCCATCCCAGCATCTG	9	+	101157700-101157749		qo16d12.x1 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGE:1908695 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001030005.2	ILMN_19503	CPLX3	NM_001030005.2	NM_001030005.2		594855	75677370	NM_001030005.2	CPLX3	NP_001025176.1	ILMN_1689515	0004200767	S	1851	GATGACTTTGAGCCTGTCCTTTCCCTCCTTGAGCCTGTCTTGCTTGTCCC	15	+	72911028-72911077	15q24.1b	Homo sapiens complexin 3 (CPLX3), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	The directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 6836] [evidence IEA]; Fusion of intracellular membrane-bounded vesicles with the pre-synaptic membrane of the neuronal cell resulting in release of neurotransmitter into the synaptic cleft [goid 16079] [evidence IEA]; The regulated release of proinsulin from secretory granules (B granules) in the B cells of the pancreas; accompanied by cleavage of proinsulin to form mature insulin [goid 30073] [evidence IEA]; Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell or group of cells [goid 46928] [evidence IEA]	Enables the directed movement of a neurotransmitter into, out of, within or between cells. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell [goid 5326] [evidence IEA]; Interacting selectively with a syntaxin, a SNAP receptor involved in the docking of synaptic vesicles at the presynaptic zone of a synapse [goid 19905] [evidence IEA]	Nbla11589; FLJ13993; CPX-III; CPXIII	Nbla11589; FLJ13993; CPX-III; CPXIII
Homo sapiens	RefSeq	XM_930990.1	ILMN_41849	LOC642660	XM_930990.1	XM_930990.1		642660	89035490	XM_930990.1	LOC642660	XP_936083.1	ILMN_1655479	0004480386	S	241	CAGGAGCCACCTCCGGAGTACCGGGAAGTAAGACAGGCACAGCTGGAGTG	12	+	39214276-39214278:39214780-39214812:39215082-39215095		PREDICTED: Homo sapiens hypothetical protein LOC642660 (LOC642660), mRNA.					
Homo sapiens	RefSeq	NM_182511.2	ILMN_19202	CBLN2	NM_182511.2	NM_182511.2		147381	40255263	NM_182511.2	CBLN2	NP_872317.1	ILMN_1796069	0000620685	S	2385	TCCGGATCCTCTTTTGATCTGCCCAGGAAAGGGATGCATTGACACTCTCC	18	-	68355193-68355242	18q22.3b	Homo sapiens cerebellin 2 precursor (CBLN2), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_001033556.1	ILMN_29403	PPM1B	NM_001033556.1	NM_001033556.1		5495	75813617	NM_001033556.1	PPM1B	NP_001028728.1	ILMN_1734991	0006280138	I	1448	GTAATCCTAGCACTTTTGTCGCCTGGGCGACACACCAAGGCTCTGTCTCA	2	+	44290026-44290075	2p21d	Homo sapiens protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform (PPM1B), transcript variant 4, mRNA.	A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 9684878] [evidence TAS]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]; The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 9684878] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PPC2BETAX; MGC21657; PP2CB; PP2C-beta-X; PP2CBETA	PPC2BETAX; MGC21657; PP2CB; PP2C-beta-X; PP2CBETA
Homo sapiens	RefSeq	NM_025158.3	ILMN_28219	RUFY1	NM_025158.3	NM_025158.3		80230	94721335	NM_025158.3	RUFY1	NP_079434.3	ILMN_2277025	0002680646	I	80	GGTCAGCGCTTGAGCCGGGAGAAGAGTTTGAGATCGTGGACCGAAGCCAG	5	+	178910256-178910305	5q35.3d	Homo sapiens RUN and FYVE domain containing 1 (RUFY1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding an early endosome [goid 31901] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process that modulates the frequency, rate or extent of endocytosis [goid 30100] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with a lipid [goid 8289] [evidence IEA]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZFYVE12; RABIP4; FLJ22251	ZFYVE12; RABIP4; FLJ22251
Homo sapiens	RefSeq	NM_032508.1	ILMN_24307	TMEM185A	NM_032508.1	NM_032508.1		84548	22296883	NM_032508.1	TMEM185A	NP_115897.1	ILMN_1738276	0006980400	S	661	TGCCGCTGTTCTTTGTTTCCCCGGTGTCTGTTGCAGCTTGCGTTTGGGGC	X	-	148690331-148690380	Xq28b	Homo sapiens transmembrane protein 185A (TMEM185A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FAM11A; MGC118845; CXorf13; MGC118844	FAM11A; MGC118845; CXorf13; MGC118844
Homo sapiens	Unigene	Hs.334093	ILMN_86509	HS.334093	Hs.334093		Hs.334093		13705883	BG184196			ILMN_1826462	0001820154	S	86	AGCCAGAGTACTTGTTGCAGATGCAATGCTAGGTCTTCAGCCATGTGCTA	21	-	14971094-14971143		RST3117 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	XM_930551.1	ILMN_31674	LOC646483	XM_930551.1	XM_930551.1		646483	89025430	XM_930551.1	LOC646483	XP_935644.1	ILMN_1673738	0005810204	A	463	GGACCATTCTGATCATCCTCACTGGACGCCACAGGGGCAAGAGGGTGGTT	7	+	137057712-137057761	7q33d	PREDICTED: Homo sapiens similar to 60S ribosomal protein L6 (TAX-responsive enhancer element binding protein 107) (TAXREB107) (Neoplasm-related protein C140), transcript variant 1 (LOC646483), mRNA.					
Homo sapiens	RefSeq	NM_014516.2	ILMN_1667	CNOT3	NM_014516.2	NM_014516.2		4849	42544236	NM_014516.2	CNOT3	NP_055331.1	ILMN_2207393	0000380309	S	2417	CATGATGTGGTTCCAGAGGCACGAGGAGCCCAAGACCATCACTGACGAGT	19	+	54657520-54657569	19q13.42a	Homo sapiens CCR4-NOT transcription complex, subunit 3 (CNOT3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12207886] [evidence IPI]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]	NOT3H; KIAA0691; LENG2; NOT3	NOT3H; KIAA0691; LENG2; NOT3
Homo sapiens	RefSeq	NM_001014764.1	ILMN_10131	TMEM93	NM_001014764.1	NM_001014764.1		83460	62339423	NM_001014764.1	TMEM93	NP_001014764.1	ILMN_1794560	0003140768	I	164	ACCCTCAATCTCCTCGGCGTCTTTGGAAGATCCGAGGCCCAGGACTGGTG	17	+	3519002-3519051	17p13.3a	Homo sapiens transmembrane protein 93 (TMEM93), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC2963	MGC2963
Homo sapiens	RefSeq	NM_153029.3	ILMN_180409	N4BP1	NM_153029.3	NM_153029.3		9683	48928018	NM_153029.3	N4BP1	NP_694574.3	ILMN_2201966	0002680561	S	6904	GACCGCACAGCACTTTGTGTCTCGCTTTGAGCACTTGCCACTCTGGCTGG	16	-	48572789-48572838	16q12.1b	Homo sapiens NEDD4 binding protein 1 (N4BP1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			KIAA0615; FLJ31821; MGC176730	KIAA0615; FLJ31821; MGC176730
Homo sapiens	RefSeq	NM_001037498.1	ILMN_569	DEFB112	NM_001037498.1	NM_001037498.1		245915	82734216	NM_001037498.1	DEFB112	NP_001032587.1	ILMN_2086654	0005310167	S	84	GGCCCGACATGGGACAGAGAAAATCAGCACAGCCAGAAGTGAAGGGCACC	6	-	50119455-50119473:50124209-50124239	6p12.3a	Homo sapiens defensin, beta 112 (DEFB112), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]		DEFB-12	DEFB-12
Homo sapiens	RefSeq	NM_001040056.1	ILMN_177323	MAPK3	NM_001040056.1	NM_001040056.1		5595	91718896	NM_001040056.1	MAPK3	NP_001035145.1	ILMN_2402341	0003870601	A	1773	AGGAACATTCCTTAGTCTCAAGGGCTAGCATCCCTGAGGAGCCAGGCCGG	16	-	30125582-30125631	16p11.2d	Homo sapiens mitogen-activated protein kinase 3 (MAPK3), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9687510] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16626623] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 16456541] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 17322878] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11741541] [evidence EXP]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7739560] [evidence EXP]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7687743] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 16626623] [evidence EXP]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 7687743] [evidence NAS]; Catalysis of the phosphorylation of proteins. Mitogen-activated protein kinase; a family of protein kinases that perform a crucial step in relaying signals from the plasma membrane to the nucleus. They are activated by a wide range of proliferation- or differentiation-inducing signals; activation is strong with agonists such as polypeptide growth factors and tumor-promoting phorbol esters, but weak (in most cell backgrounds) by stress stimuli [goid 4707] [pmid 11741541] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15950189] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PRKM3; ERK1; MGC20180; P44MAPK; HS44KDAP; P44ERK1; HUMKER1A	PRKM3; ERK1; MGC20180; P44MAPK; HS44KDAP; P44ERK1; HUMKER1A
Homo sapiens	RefSeq	NM_024780.3	ILMN_28919	TMC5	NM_024780.3	NM_024780.3		79838	33942079	NM_024780.3	TMC5	NP_079056.2	ILMN_1730117	0002140601	S	3101	ACATGAGTCTTTGGAGTCGGGGATGGAGGAGGTTCTGCCCCTGTGAGGTG	16	+	19417350-19417399	16p12.3a	Homo sapiens transmembrane channel-like 5 (TMC5), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ13593	FLJ13593
Homo sapiens	RefSeq	NM_016377.2	ILMN_21017	AKAP7	NM_016377.2	NM_016377.2		9465	20336194	NM_016377.2	AKAP7	NP_057461.1	ILMN_1703049	0004780619	I	453	GGGATTGGTACTTTTGGAAATCAGGTTGGATTTGTGAAGCTGGCAGAAGG	6	+	131490332-131490381	6q23.2a	Homo sapiens A kinase (PRKA) anchor protein 7 (AKAP7), transcript variant gamma, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10613906] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 10613906] [evidence IDA]; The membranes on the sides of epithelial cells which lie at the interface of adjacent cells [goid 16328] [pmid 10613906] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10613906] [evidence IDA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [pmid 9545239] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 10613906] [evidence TAS]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 9545239] [evidence IC ]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage [goid 16070] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10613906] [evidence TAS]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 9545239] [evidence IDA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Interacting selectively with any subunit of protein kinase A [goid 51018] [pmid 10613906] [evidence IDA]	AKAP18	AKAP18
Homo sapiens	RefSeq	XM_930058.1	ILMN_45967	LOC647058	XM_930058.1	XM_930058.1		647058	88943623	XM_930058.1	LOC647058	XP_935151.1	ILMN_1691358	0000360196	S	358	GGCTTCCCTCCCTTGGAGGTCTCATTTGGTTCTGGTGTCTGCTATGCCAC	1	+	180526000-180526049		PREDICTED: Homo sapiens similar to suppressor of initiator codon mutations, related sequence 1 (LOC647058), mRNA.					
Homo sapiens	Unigene	Hs.139204	ILMN_77861	HS.139204	Hs.139204		Hs.139204		27881063	BX117766			ILMN_1822823	0002030561	S	252	AGCCCTAACCCTCAATGTGACTGTGTTTTGCAGGTAGGGCCTTAAGGAGG	3	+	63589128-63589177		BX117766 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGp998N035151, mRNA sequence					
Homo sapiens	RefSeq	NM_013979.1	ILMN_6727	BNIP1	NM_013979.1	NM_013979.1		662	7524349	NM_013979.1	BNIP1	NP_053582.1	ILMN_2318733	0006420376	A	859	CTCCTGTTTCAGGATCTGTCCTGGTTCCTGAGCTCTAGGCTGCTAAGCTG	5	+	172523564-172523613	5q35.2a	Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 1 (BNIP1), transcript variant BNIP1-b, mRNA.	The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 7954800] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7954800] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15272311] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 15272311] [evidence TAS]; A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25 [goid 31201] [pmid 15272311] [evidence IDA]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 7954800] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 7954800] [evidence TAS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 15272311] [evidence IMP]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the endoplasmic reticulum [goid 7029] [pmid 15272311] [evidence IMP]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The joining of 2 or more lipid bilayer membranes that surround the endoplasmic reticulum [goid 16320] [pmid 15272311] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7954800] [evidence IPI]	NIP1; TRG-8; SEC20	NIP1; TRG-8; SEC20
Homo sapiens	RefSeq	NM_005683.2	ILMN_162970	GPR55	NM_005683.3	NM_005683.3		9290	115345344	NM_005683.3	GPR55	NP_005674.2	ILMN_1723274	0002350546	S	3742	GGCCCAGCAGCACAGGAGGGGCGGACGGTTAGCTTTGGAAAAAATGACTT	2	-	231772079-231772128	2q37.1a	Homo sapiens G protein-coupled receptor 55 (GPR55), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9931487] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 9931487] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	NM_153292.1	ILMN_14062	NOS2A	NM_153292.1	NM_153292.1		4843	24041031	NM_153292.1	NOS2A	NP_695024.1	ILMN_2322831	0004760324	A	3862	GGCCTGGCAAGTGGGTGAAAGATGGAACTTGCTGCTGAGTGCACCACTTC	17	-	23108096-23108145	17q11.1c	Homo sapiens nitric oxide synthase 2A (inducible, hepatocytes) (NOS2A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 7544003] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7504305] [evidence IMP]; The portion of the cytoskeleton that lies just beneath the plasma membrane [goid 30863] [evidence IEA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of leukocyte mediated cytotoxicity [goid 1912] [pmid 10450191] [evidence TAS]; Any process of the innate immune response that takes place in the mucosal tissues [goid 2227] [pmid 18390757] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid [goid 6527] [pmid 7504305] [evidence IDA]; The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species [goid 6801] [evidence ISS]; The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water [goid 6809] [evidence IEA]; Any process that modulates the frequency, rate or extent of cellular respiration, the enzymatic release of energy from organic compounds [goid 43457] [pmid 10450191] [evidence TAS]; Any process that modulates the frequency, rate or extent of the regulated release of insulin [goid 50796] [pmid 8383325] [evidence IMP]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [pmid 18390757] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the killing by an organism of cells in another organism [goid 51712] [pmid 7544003] [evidence IMP]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: L-arginine + n NADPH + n H+ + m O2 = citrulline + nitric oxide + n NADP+ [goid 4517] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with a tetrahydrobiopterin, 5,6,7,8-tetrahydrobiopterin or a derivative thereof; tetrahydrobiopterins are enzyme cofactors that carry electrons in redox reactions [goid 34617] [evidence ISS]; Interacting selectively with 2-amino-5-(carbamimidamido)pentanoic acid [goid 34618] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Interacting selectively with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP, or the reduced form, NADPH [goid 50661] [evidence IEA]	HEP-NOS; INOS; NOS; NOS2	HEP-NOS; INOS; NOS; NOS2
Homo sapiens	RefSeq	NM_006676.4	ILMN_30258	USP20	NM_006676.4	NM_006676.4		10868	56713257	NM_006676.4	USP20	NP_006667.2	ILMN_1771642	0001710592	I	2999	TCCAAAGAGCAGGTCCCTGAAAGCACCTTCCTGGAGGATGTGGGAGGGCC	9	+	131682469-131682518	9q34.11d	Homo sapiens ubiquitin specific peptidase 20 (USP20), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The removal of one or more ubiquitin moieties from a protein [goid 16579] [evidence NAS]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	LSFR3A; VDU2; KIAA1003	LSFR3A; VDU2; KIAA1003
Homo sapiens	RefSeq	XM_939817.1	ILMN_445	HIATL1	NM_032558.2	NM_032558.2		84641	94721310	NM_032558.2	HIATL1	NP_115947.2	ILMN_1664371	0002370082	A	400	GTGTGTACCATGCTGCTATTGTCATCTTCCTTGAATTCTTTGCGTGGGGC	9	+	96217283-96217332	9q22.32a	Homo sapiens hippocampus abundant transcript-like 1 (HIATL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	FLJ14753; MGC117350	
Homo sapiens	RefSeq	NM_032318.1	ILMN_445	HIATL1	NM_032558.2	NM_032558.2		84641	94721310	NM_032558.2	HIATL1	NP_115947.2	ILMN_1703229	0005570563	A	397	CAAGTGTGTACCATGCTGCTATTGTCATCTTCCTTGAATTCTTTGCGTGG	9	+	96217280-96217329	9q22.32a	Homo sapiens hippocampus abundant transcript-like 1 (HIATL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	FLJ14753; MGC117350	MGC12945
Homo sapiens	RefSeq	NM_032558.1	ILMN_445	HIATL1	NM_032558.2	NM_032558.2		84641	94721310	NM_032558.2	HIATL1	NP_115947.2	ILMN_1737964	0004640427	S	2483	CTCAGATTCCTGGACCTGGTGTCCTGGTTGGGTCCAAGGTGATTTTACAG	9	+	96262208-96262257	9q22.32a	Homo sapiens hippocampus abundant transcript-like 1 (HIATL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	FLJ14753; MGC117350	FLJ14753
Homo sapiens	RefSeq	NM_032318.1	ILMN_445	HIATL1	NM_032558.2	NM_032558.2		84641	94721310	NM_032558.2	HIATL1	NP_115947.2	ILMN_1777058	0005960092	I	612	GGCACTGTATTCTTTACCTGCTTCCCAATCCCACTGATGAGGATCAGCCC	9	+	96240579-96240628	9q22.32a	Homo sapiens hippocampus abundant transcript-like 1 (HIATL1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of tetracycline into, out of, within or between cells. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles) [goid 15904] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms [goid 46677] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out) [goid 15520] [evidence IEA]	FLJ14753; MGC117350	MGC12945
Homo sapiens	RefSeq	NM_001251.1	ILMN_5188	CD68	NM_001251.1	NM_001251.1		968	4557434	NM_001251.1	CD68	NP_001242.1	ILMN_1714861	0003120370	S	1637	GACGGGGTTTTCCTTGCTCCTGCCAGGATTAAAAGTCCATGAGTTTCTTG	17	+	7426110-7426153	17p13.1d	Homo sapiens CD68 antigen (CD68), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 7680921] [evidence TAS]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 7680921] [evidence TAS]			SCARD1	SCARD1
Homo sapiens	RefSeq	NM_152888.1	ILMN_18096	COL22A1	NM_152888.1	NM_152888.1		169044	40805822	NM_152888.1	COL22A1	NP_690848.1	ILMN_1784532	0000840288	S	6207	GCCAGGGCACTGACCAGAGCTGGGAAATTTGTATCTCCAAGGCGGCTCTG	8	-	139743471-139743508:139745130-139745141	8q24.23c	Homo sapiens collagen, type XXII, alpha 1 (COL22A1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]		
Homo sapiens	RefSeq	XM_936468.1	ILMN_139278	PXMP2	XM_936468.1	XM_936468.1		5827	89036578	XM_936468.1	PXMP2	XP_941561.1	ILMN_1670512	0005550674	I	481	GGGCTGTCCTGTTGCCCGTTCATAACCACACAGCTTCCCAACTCCCAAAC				12q24.33d	PREDICTED: Homo sapiens peroxisomal membrane protein 2, 22kDa (PXMP2), mRNA.	A small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2) [goid 5777] [evidence IEA]; The lipid bilayer surrounding a peroxisome [goid 5778] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16683188] [evidence IPI]		
Homo sapiens	Unigene	Hs.520328	ILMN_99753	HS.520328	Hs.520328		Hs.520328		4332044	AI469954			ILMN_1878459	0000020519	S	348	GCCCAGAGAACTGGCTTCTTGTTCCCAGTCTACCACTTACTGAGCTGCTG	6	+	113790478-113790527		tj89a12.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:2148670 3, mRNA sequence					
Homo sapiens	Unigene	Hs.574272	ILMN_126453	HS.574272	Hs.574272		Hs.574272		13750284	BG461778			ILMN_1890061	0006840669	S	299	TCCTCATGTAGATAGACAGCTCCGGCTCAAGTCCAGGGGCAAGGGGAAGG	15	-	46028852-46028901		RST44693 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_022158.2	ILMN_10511	FN3K	NM_022158.2	NM_022158.2		64122	31542792	NM_022158.2	FN3K	NP_071441.1	ILMN_1801588	0001690196	S	677	TGAGGACGACGTGGGGCCCATTATTTACGACCCGGCTTCCTTCTATGGCC	17	+	78301662-78301711	17q25.3h	Homo sapiens fructosamine 3 kinase (FN3K), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving fructoselysine, a fructose molecule containing a lysine moiety in place of a hydroxyl group [goid 30393] [pmid 11016445] [evidence NAS]	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the phosphorylation of fructosamine to form fructosamine-3-kinase [goid 30387] [pmid 11016445] [evidence NAS]		
Homo sapiens	RefSeq	NM_019605.2	ILMN_9918	SERTAD4	NM_019605.2	NM_019605.2		56256	19923818	NM_019605.2	SERTAD4	NP_062551.1	ILMN_1730794	0006330504	S	1806	CACCTGTCTAGGGGCGGCAATCAACAGTCTTACACAGAGAGGGTATTCCC	1	+	208482861-208482910	1q32.2c	Homo sapiens SERTA domain containing 4 (SERTAD4), mRNA.				DJ667H12.2	DJ667H12.2
Homo sapiens	RefSeq	NM_018026.2	ILMN_16215	PACS1	NM_018026.2	NM_018026.2		55690	30089915	NM_018026.2	PACS1	NP_060496.2	ILMN_1716488	0004540164	S	4148	GTCTGAGCCCCTCATTCCTGACCGTCCGTGTTCTCAGGAGTGGTTGAGGA	11	+	65768449-65768498	11q13.1d-q13.1e	Homo sapiens phosphofurin acidic cluster sorting protein 1 (PACS1), mRNA.	A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15569716] [evidence EXP]; A vesicle with a coat formed of the COPI coat complex proteins. COPI-coated vesicles are found associated with Golgi membranes at steady state, are involved in Golgi to endoplasmic reticulum (retrograde) vesicle transport, and possibly also in intra-Golgi transport [goid 30137] [evidence IEA]	The process of directing proteins towards the Golgi using signals contained within the protein [goid 42] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10707087] [evidence IPI]	FLJ10209; KIAA1175	FLJ10209; KIAA1175
Homo sapiens	RefSeq	NM_015289.2	ILMN_5610	VPS39	NM_015289.2	NM_015289.2		23339	54234023	NM_015289.2	VPS39	NP_056104.2	ILMN_1770388	0002710204	S	4417	AGTGTGTGGCGCCACGTCCCGACTGGCCATACCCACACAGAAGCAGTGCT	15	-	42451264-42451313	15q15.1d	Homo sapiens vacuolar protein sorting 39 homolog (S. cerevisiae) (VPS39), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Modulates the rate of GTP hydrolysis by a small monomeric GTPase [goid 5083] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	VAM6; FLJ46546; hVam6p; FLJ21681; TLP; KIAA0770	VAM6; FLJ46546; hVam6p; FLJ21681; TLP; KIAA0770
Homo sapiens	Unigene	Hs.58896	ILMN_73177	HS.58896	Hs.58896		Hs.58896		2656525	AA680058			ILMN_1908135	0001510379	S	338	GTTAAAGTTCACGCATATTGTGGTCTCAGTGCTAGGTAAATGGCACGGGG	18	+	24980985-24981034		zi10a05.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:430352 3, mRNA sequence					
Homo sapiens	RefSeq	XM_932734.1	ILMN_173212	LOC729351	XM_001130016.1	XM_001130016.1		729351	113421602	XM_001130016.1	LOC729351	XP_001130016.1	ILMN_1664909	0005390537	S	181	GCTCGGGCCTTGACTGTGCTGGGAGCCGGTAGGCGTCCTCCGCGACCCGC	10	+	69990319-69990368	10q21.3d-q21.3e	PREDICTED: Homo sapiens hypothetical protein LOC729351 (LOC729351), mRNA.					
Homo sapiens	RefSeq	NM_001042515.1	ILMN_177272	FRMPD2L2	NM_001042515.1	NM_001042515.1		728603	110346446	NM_001042515.1	FRMPD2L2	NP_001035980.1	ILMN_2283094	0005260209	I	54	CAAACAGGTGAATACAGAAGACAGTGCCAGTCGGAGGGTGGCATTAACAC	10	-	46676516-46676530:46676644-46676678	10q11.21d	Homo sapiens FERM and PDZ domain containing 2 like 2 (FRMPD2L2), transcript variant 2, mRNA.				bA556L1.2; PDZK5B; PDZD5B	bA556L1.2; PDZK5B; PDZD5B
Homo sapiens	RefSeq	XM_929007.1	ILMN_36931	LOC646047	XM_929007.1	XM_929007.1		646047	89041760	XM_929007.1	LOC646047	XP_934100.1	ILMN_1695691	0004670541	S	545	GCCATGCCCATCCTATTCCTGGAGTCAGAGTGCCACAGCAGACACATCTG	17	+	60363635-60363684		PREDICTED: Homo sapiens similar to pleckstrin homology domain containing, family M (with RUN domain) member 1 (LOC646047), mRNA.					
Homo sapiens	RefSeq	NM_021237.3	ILMN_28373	SELK	NM_021237.3	NM_021237.3		58515	46370091	NM_021237.3	SELK	NP_067060.2	ILMN_1758056	0007550494	S	51	TCGTCCTCGTCAGCATTTTGTCTAATCGCGGCCTGTGACGCTCGAAGGGC	3	-	53925889-53925938	3p21.1a	Homo sapiens selenoprotein K (SELK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16962588] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 16962588] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	HSPC297; MGC17057; HSPC030	HSPC297; MGC17057; HSPC030
Homo sapiens	RefSeq	NM_021237.3	ILMN_28373	SELK	NM_021237.3	NM_021237.3		58515	46370091	NM_021237.3	SELK	NP_067060.2	ILMN_2134110	0002710161	S	428	CCCCTCCAATGGCTGGTGGATGAGGAAGGTAAATGTCTGCTCTAAGAAGC	3	-	53919566-53919584:53919585-53919588:53919853-53919879	3p21.1a	Homo sapiens selenoprotein K (SELK), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 16962588] [evidence IDA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [pmid 16962588] [evidence IMP]	Interacting selectively with selenium (Se) [goid 8430] [evidence IEA]	HSPC297; MGC17057; HSPC030	HSPC297; MGC17057; HSPC030
Homo sapiens	RefSeq	NM_023923.3	ILMN_174211	PHACTR4	NM_023923.3	NM_023923.3		65979	115430208	NM_023923.3	PHACTR4	NP_076412.3	ILMN_2380101	0004610477	A	5444	GGCACGTGCCACCAGGCCCAGCTAATTTTTGTGTTTTGTTAGAGATGAGG	1	+	28698718-28698767	1p35.3b	Homo sapiens phosphatase and actin regulator 4 (PHACTR4), transcript variant 2, mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	DKFZp686L07205; FLJ13171; MGC34186; MGC20618; RP11-442N24__A.1	DKFZp686L07205; FLJ13171; MGC34186; MGC20618; RP11-442N24__A.1
Homo sapiens	RefSeq	NM_023923.3	ILMN_174211	PHACTR4	NM_023923.3	NM_023923.3		65979	115430208	NM_023923.3	PHACTR4	NP_076412.3	ILMN_2279099	0006480543	I	102	GCCATTTCCTGATGTTTGGCAGTGACACTGAAAGAGGACCGCATGTCCCC	1	+	28637349-28637398	1p35.3b	Homo sapiens phosphatase and actin regulator 4 (PHACTR4), transcript variant 2, mRNA.			Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]	DKFZp686L07205; FLJ13171; MGC34186; MGC20618; RP11-442N24__A.1	DKFZp686L07205; FLJ13171; MGC34186; MGC20618; RP11-442N24__A.1
Homo sapiens	RefSeq	NM_173617.1	ILMN_28114	FLJ36701	NM_173617.1	NM_173617.1		283860	27734731	NM_173617.1	FLJ36701	NP_775888.1	ILMN_1722825	0006290639	S	1933	CATCCCGATGGGAGATGTTGAGTTTTCACCACGCTGCTGAGTGTGACGTG	16	+	87757274-87757323	16q24.3a	Homo sapiens hypothetical protein FLJ36701 (FLJ36701), mRNA.					
Homo sapiens	RefSeq	XM_001721795.1	ILMN_342796	LOC100134000	XM_001721795.1	XM_001721795.1		100134000	169161773	XM_001721795.1	LOC100134000	XP_001721847.1	ILMN_3241904	0003400239	S	61	GGGATTCTGGACCACAAGATGGGGCACCTGGCCTGTTTCTCCGGGGGCAT					PREDICTED: Homo sapiens similar to mannosidase, alpha, class 1C, member 1 (LOC100134000), mRNA.					
Homo sapiens	RefSeq	XM_942032.1	ILMN_44040	LOC652541	XM_942032.1	XM_942032.1		652541	89071679	XM_942032.1	LOC652541	XP_947125.1	ILMN_1740685	0002640463	S	211	GTCCTGGACCTGGATTCTGACTGTGGGTCTGTTCCTGGTTTCCCAGATGC					PREDICTED: Homo sapiens hypothetical protein LOC652541 (LOC652541), mRNA.					
Homo sapiens	RefSeq	NM_145345.2	ILMN_20205	UBXN11	NM_145345.2	NM_145345.2		91544	116734680	NM_145345.2	UBXN11	NP_663320.2	ILMN_2277121	0002030367	I	169	GCAGTGGTGCCAGGCGTTGCTCTTACCTGTACCATAACCAGGAGGCTGAT	1	-	26644538-26644587	1p36.11b	Homo sapiens UBX domain protein 11 (UBXN11), transcript variant 1, mRNA.				PP2243; SOC; COA-1; DKFZp686F04228	PP2243; DKFZp686F04228; SOC; COA-1
Homo sapiens	RefSeq	XM_001723002.1	ILMN_345175	LOC100130267	XM_001723002.1	XM_001723002.1		100130267	169173206	XM_001723002.1	LOC100130267	XP_001723054.1	ILMN_3188269	0004760403	A	1829	CGCGCCCCGATCTTCTGCTTTCTTCTGCACAGGGAGTTGTGAGGTTGCTA				8p21.2b	PREDICTED: Homo sapiens hypothetical protein LOC100130267 (LOC100130267), mRNA.					
Homo sapiens	RefSeq	NM_001031717.1	ILMN_14216	CRELD1	NM_001031717.2	NM_001031717.2		78987	116734858	NM_001031717.2	CRELD1	NP_001026887.1	ILMN_1739558	0003400619	A	1845	GGTGGCTGCTAGAGCTTTGGCCCCTGCTTAGGATTAGGTGGTCCTCACAG	3	+	9961533-9961582	3p25.3c	Homo sapiens cysteine-rich with EGF-like domains 1 (CRELD1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	AVSD2; CIRRIN; DKFZP566D213	AVSD2; CIRRIN; DKFZP566D213
Homo sapiens	RefSeq	NM_181782.2	ILMN_9525	NCOA7	NM_181782.2	NM_181782.2		135112	42476174	NM_181782.2	NCOA7	NP_861447.2	ILMN_1687768	0000630091	S	5127	CTGTAGCCTGGGTGTACGTTTCACTCAAGTTCTCCTACTGAGGACTCTTG	6	+	126293556-126293605	6q22.31e-q22.32a	Homo sapiens nuclear receptor coactivator 7 (NCOA7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a cell wall [goid 16998] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10395741] [evidence IPI]	FLJ45605; dJ187J11.3; ESNA1; Nbla00052; Nbla10993; ERAP140; MGC88425	FLJ45605; dJ187J11.3; ESNA1; Nbla00052; Nbla10993; ERAP140; MGC88425
Homo sapiens	Unigene	Hs.435258	ILMN_91419	HS.435258	Hs.435258		Hs.435258		27786442	CB048155			ILMN_1912745	0005820372	S	153	GTTGGAGCCTCCTTTATAATTGTTCCTGTACATTTGCCATCCCTCCAGAC	2	+	195148847-195148896		NISC_gj03b08.y1 NCI_CGAP_Pr28 Homo sapiens cDNA clone IMAGE:3270494 5, mRNA sequence					
Homo sapiens	RefSeq	NM_001080533.1	ILMN_169598	UNC119B	NM_001080533.1	NM_001080533.1		84747	122937499	NM_001080533.1	UNC119B	NP_001074002.1	ILMN_3245351	0001500576	S	4347	CCAGTGTCACTATGATGTCAGTGAGGTCTGGGGATGAGGACAGTGTGTCC	12	+	119645362-119645411	12q24.31a	Homo sapiens unc-119 homolog B (C. elegans) (UNC119B), mRNA.				MGC5139	MGC5139
Homo sapiens	RefSeq	XM_931374.1	ILMN_38638	LOC653107	XM_931374.1	XM_931374.1		653107	89031090	XM_931374.1	LOC653107	XP_936467.1	ILMN_1759493	0005870209	I	343	TCACCAGTGTGTCACCCTGGGGGCAGCAGGGTCACTTGTGCTGTAACCCT	10	+	47880687-47880736	10q11.22b	PREDICTED: Homo sapiens similar to Annexin A8 (Annexin VIII) (Vascular anticoagulant-beta) (VAC-beta), transcript variant 8 (LOC653107), mRNA.					
Homo sapiens	RefSeq	XM_932003.1	ILMN_165087	LOC729826	XM_001131447.1	XM_001131447.1		729826	113416508	XM_001131447.1	LOC729826	XP_001131447.1	ILMN_1697378	0007380079	A	524	CCTGCCAGCTAGTAGAGTGCAACATGTGTAAAAATCTTACAGTTAAATGG	5	+	25224114-25224163	5p14.1e	PREDICTED: Homo sapiens hypothetical protein LOC729826 (LOC729826), mRNA.					
Homo sapiens	RefSeq	XM_942791.1	ILMN_165087	LOC729826	XM_001131447.1	XM_001131447.1		729826	113416508	XM_001131447.1	LOC729826	XP_001131447.1	ILMN_1750299	0002750689	A	3168	CCTGCAGACACCGGAGGCCTCTGCTGTGGCTGCCCACTGGCTGTGCTCAG	5	+	25226758-25226807	5p14.1e	PREDICTED: Homo sapiens hypothetical protein LOC729826 (LOC729826), mRNA.					
Homo sapiens	Unigene	Hs.579949	ILMN_132130	HS.579949	Hs.579949		Hs.579949		4326807	AI473762			ILMN_1893083	0006180307	S	331	ACTAGGGGTCCCAGCGGTCAAGGGGGTGGAATGCCGGCGTCCATCGCGAA	1	-	1645952-1646001		ti67h12.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2137127 3, mRNA sequence					
Homo sapiens	RefSeq	XM_944195.1	ILMN_33563	HIT-40	XM_939522.2	XM_939522.2		90576	113428504	XM_939522.2	HIT-40	XP_944615.1	ILMN_1659265	0000380112	A	4174	GTGCCCAGTGTTTTGATGTGTTGAGATGACTAGATGTATGGCATTGTGGG				19p13.2a	PREDICTED: Homo sapiens zinc finger protein HIT-40, transcript variant 3 (HIT-40), mRNA.					
Homo sapiens	RefSeq	NM_018270.3	ILMN_178100	C20ORF20	NM_018270.3	NM_018270.3		55257	40353206	NM_018270.3	C20orf20	NP_060740.1	ILMN_1790136	0007380634	S	1534	GGCCGCCCCAGTGCTGATGGAGATGCCACTTTCGTGTGACTGCGAACATT	20	+	60902321-60902370	20q13.33d	Homo sapiens chromosome 20 open reading frame 20 (C20orf20), mRNA.				MRG15BP; MRGBP; FLJ10914; Eaf7	MRGBP; URCC4; MRG15BP; FLJ10914; Eaf7
Homo sapiens	RefSeq	NM_014985.2	ILMN_570	CEP152	NM_014985.2	NM_014985.2		22995	110347567	NM_014985.2	CEP152	NP_055800.2	ILMN_2199676	0000990189	S	4807	GGAGCCAGGAAAGATCAGTGTGAATTGTGGACACCCATCTCGTCATAAGG	15	-	49030588-49030637	15q21.1d	Homo sapiens centrosomal protein 152kDa (CEP152), mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]			KIAA0912	KIAA0912
Homo sapiens	RefSeq	NM_005366.4	ILMN_17451	MAGEA11	NM_005366.4	NM_005366.4		4110	65507077	NM_005366.4	MAGEA11	NP_005357.2	ILMN_2360047	0001500452	A	1113	CCTGAGCATTATGGGGGTGTATGCTGGAAGGGAGCACTTCCTCTTTGGGG	X	-	148797766-148797815	Xq28b	Homo sapiens melanoma antigen family A, 11 (MAGEA11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	MAGE11; MAGEA-11; MGC10511; MAGE-11	MAGE11; MAGEA-11; MGC10511; MAGE-11
Homo sapiens	RefSeq	NM_005366.4	ILMN_17451	MAGEA11	NM_005366.4	NM_005366.4		4110	65507077	NM_005366.4	MAGEA11	NP_005357.2	ILMN_2267990	0002710242	I	72	CATGAGGAGGCAAGCCTTGGGAATCTGAGGGATGGAGACTCAGTTCCGCA	X	-	148798807-148798856	Xq28b	Homo sapiens melanoma antigen family A, 11 (MAGEA11), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	MAGE11; MAGEA-11; MGC10511; MAGE-11	MAGE11; MAGEA-11; MGC10511; MAGE-11
Homo sapiens	RefSeq	XM_932499.1	ILMN_30721	LOC644886	XM_932499.1	XM_932499.1		644886	89031319	XM_932499.1	LOC644886	XP_937592.1	ILMN_1798505	0000770064	S	557	TGCCCCGCAAAGAGAGACAAGGGAGAAAAAGACAGCAGGGAAAACCCCGG	10	-	61139551-61139600		PREDICTED: Homo sapiens hypothetical protein LOC644886 (LOC644886), mRNA.					
Homo sapiens	RefSeq	XM_945649.1	ILMN_178005	PGAM5	XM_001126125.1	XM_001126125.1		192111	113424016	XM_001126125.1	PGAM5	XP_001126125.1	ILMN_1789944	0002940274	A	1494	CGACTGAGGCACGTGGATGAGGAGGGCACCCAGGTTCTGTTCACAACTCA				12q24.33d	PREDICTED: Homo sapiens phosphoglycerate mutase family member 5 (PGAM5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	XM_942043.1	ILMN_178005	PGAM5	XM_001126125.1	XM_001126125.1		192111	113424016	XM_001126125.1	PGAM5	XP_001126125.1	ILMN_1788254	0001050021	I	2416	TGCTGGTCTCGGCTGAGGTGACACGCTAGTGACAGCCCAATAGGGGGTTA				12q24.33d	PREDICTED: Homo sapiens phosphoglycerate mutase family member 5 (PGAM5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]				
Homo sapiens	RefSeq	NM_000446.5	ILMN_370678	PON1	NM_000446.5	NM_000446.5		5444	209413720	NM_000446.5	PON1	NP_000437.3	ILMN_3307803	0000460154	S	1578	ACTCCAGTACTCACCCAGGGACTCCAGTTCACAGGCCAGAAAACATATGC	7	-	94927793-94927842	7q21.3b	Homo sapiens paraoxonase 1 (PON1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones. It is a component of the plasma membrane lipid bilayer and of plasma lipoproteins and can be found in all animal tissues [goid 8203] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus [goid 9605] [pmid 1657140] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxin stimulus [goid 9636] [evidence IEA]	Catalysis of the reaction: aryl dialkyl phosphate + H2O = dialkyl phosphate + an aryl alcohol [goid 4063] [evidence IEA]; Catalysis of the reaction: a phenyl acetate + H2O = a phenol + acetate [goid 4064] [pmid 1673382] [evidence NAS]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_006569.2	ILMN_11483	CGREF1	NM_006569.3	NM_006569.3		10669	142348009	NM_006569.3	CGREF1	NP_006560.2	ILMN_1774722	0007040689	S	1568	CAAACCCTCACCGGTTCCCCCTCACCTGGTGTTCAGACACCCCATGCTCT	2	-	27177203-27177252	2p23.3a	Homo sapiens cell growth regulator with EF-hand domain 1 (CGREF1), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation) [goid 6950] [pmid 8968090] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 8968090] [evidence TAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	CGR11	CGR11
Homo sapiens	RefSeq	NM_015865.1	ILMN_10720	SLC14A1	NM_015865.2	NM_015865.2		6563	141801930	NM_015865.2	SLC14A1	NP_056949.1	ILMN_1805561	0005560400	S	1868	CTCAGTCCCCACTTCCTGCAAACAATGGCCTGCACCCTATCCCTTGTGTG	18	+	41584445-41584494	18q12.3f	Homo sapiens solute carrier family 14 (urea transporter), member 1 (Kidd blood group) (SLC14A1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7797558] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7989337] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [evidence IEA]; The directed movement into, out of or within the cell of urea, the water-soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle [goid 15840] [pmid 7989337] [evidence TAS]	Enables the directed movement of water (H2O) into, out of, within or between cells [goid 5372] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Enables the directed movement of urea cross a membrane into, out of, within or between cells. Urea is the water soluble compound H2N-CO-NH2, produced in the liver via the ornithine-urea cycle. It is the main nitrogen-containing (urinary) excretion product in ureotelic animals [goid 15204] [pmid 7797558] [evidence TAS]; Catalysis of the reaction: Catalysis of the reaction: ATP + ubiquitin + protein N-ubiquityl(n)lysine = AMP + diphosphate + protein N-ubiquityl(n+1)lysine, i.e. the ligation of ubiquitin moieties, via isopeptide bonds, to extend the length of the multiubiquitin chain attached to a substrate protein [goid 34450] [pmid 11435423] [evidence IDA]	RACH1; FLJ41687; UTE; HsT1341; UT-B1; HUT11; JK; UT1; FLJ33745	HsT1341; JK; UT1; FLJ33745; RACH1; FLJ41687; UTE; UT-B1; HUT11
Homo sapiens	RefSeq	NM_001001410.2	ILMN_3343	C16ORF42	NM_001001410.2	NM_001001410.2		115939	48762675	NM_001001410.2	C16orf42	NP_001001410.1	ILMN_1713884	0002370414	S	959	GGCCCCGGCTGAGGTTTGGAAAGGAATCAAGAAACGGCAGAGAGACTGAG	16	-	1399436-1399437:1399438-1399485	16p13.3e	Homo sapiens chromosome 16 open reading frame 42 (C16orf42), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC24381	MGC24381
Homo sapiens	Unigene	Hs.538365	ILMN_103852	HS.538365	Hs.538365		Hs.538365		6661718	AW274688			ILMN_1846419	0001440491	S	47	GAGCAGCGGCGAATGGCACATTACAGATGTTTTACTGTCGCGGGCGCTCG	10	+	102463559-102463608		xv32e08.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2814854 3, mRNA sequence					
Homo sapiens	RefSeq	XM_931039.1	ILMN_162118	LOC390561	XR_016452.1	XR_016452.1		390561	113425173	XR_016452.1	LOC390561		ILMN_1662550	0000840328	I	553	GATCCTATGACTCTTGATATGGACGCAGTCCTGTCAGACTTTGTTCGGTC	15	+	28829961-28830010	15q13.2b	PREDICTED: Homo sapiens similar to hect domain and RLD 2 (LOC390561), mRNA.					
Homo sapiens	RefSeq	NM_138735.1	ILMN_12458	NRXN1	NM_138735.1	NM_138735.1		9378	21070966	NM_138735.1	NRXN1	NP_620072.1	ILMN_1711504	0003940278	A	3450	AGGAAGAGGGTTGTGCCAAGGTATTGATGACAAATGGGGTGATTTGCTTC	2	-	50001222-50001271	2p16.3c-p16.3b	Homo sapiens neurexin 1 (NRXN1), transcript variant beta, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1621094] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 1621094] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1621094] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11152476] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ35941; DKFZp313P2036; Hs.22998; KIAA0578	FLJ35941; DKFZp313P2036; Hs.22998; KIAA0578
Homo sapiens	RefSeq	NM_138735.1	ILMN_12458	NRXN1	NM_138735.1	NM_138735.1		9378	21070966	NM_138735.1	NRXN1	NP_620072.1	ILMN_1781398	0004150259	I	586	CATTCGCCTCGGCTATGTTTCGGATTGTTTGGGGTGCTAGGCACGGCGGA	2	-	50427763-50427812	2p16.3c-p16.3b	Homo sapiens neurexin 1 (NRXN1), transcript variant beta, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1621094] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 1621094] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 1621094] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11152476] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FLJ35941; DKFZp313P2036; Hs.22998; KIAA0578	FLJ35941; DKFZp313P2036; Hs.22998; KIAA0578
Homo sapiens	RefSeq	NM_022830.1	ILMN_6523	TUT1	NM_022830.1	NM_022830.1		64852	12383073	NM_022830.1	TUT1	NP_073741.1	ILMN_1786108	0003930113	S	2485	AGGTCACCCAGGAGCTGAAAGGACTGAGTGGTGGCGAAGAGAGGCCAGAA	11	-	62099291-62099340	11q12.3a	Homo sapiens terminal uridylyl transferase 1, U6 snRNA-specific (TUT1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]		Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: UTP + RNA(n) = diphosphate + RNA(n+1) [goid 50265] [evidence IEA]	FLJ21850; MGC149809; PAPD2; TUTase; RBM21; FLJ22347; FLJ22267; MGC131987	FLJ21850; MGC149809; TUTase; RBM21; FLJ22347; FLJ22267; PAPD2; MGC131987
Homo sapiens	RefSeq	NM_001440.2	ILMN_10725	EXTL3	NM_001440.2	NM_001440.2		2137	41281366	NM_001440.2	EXTL3	NP_001431.1	ILMN_1778226	0000010184	S	5842	GTTCTCTGGGTGGCCGGCTTGCTGCTCCGGTTTGGGCTGTCTTACCATAA	8	+	28610872-28610921	8p21.1c	Homo sapiens exostoses (multiple)-like 3 (EXTL3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan = UDP + alpha-N-acetyl-D-glucosaminyl-(1,4)-beta-D-glucuronosyl-(1,3)-beta-D-galactosyl-(1,3)-beta-D-galactosyl-(1,4)-beta-D-xylosyl-proteoglycan [goid 1888] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0519; REGR; REG; RPR; botv; EXTR1; DKFZp686C2342	KIAA0519; REGR; REG; RPR; botv; EXTR1; DKFZp686C2342
Homo sapiens	Unigene	Hs.525917	ILMN_100725	HS.525917	Hs.525917		Hs.525917		51467806	XM_373471			ILMN_1908695	0002360538	S	431	CGACATGGGCAAGGGTTTACAAGCACCCCAATAAAGTTACAGGTTCAGAG					PREDICTED: Homo sapiens hypothetical LOC387706 (LOC387706), mRNA					
Homo sapiens	Unigene	Hs.561874	ILMN_115146	HS.561874	Hs.561874		Hs.561874		21315044	BC030747			ILMN_1872323	0005420187	S	1109	AAGAGAGCTGGAAGGAGAGGAAAGAAGCTGGAGAAGCATCAGCAGAGGGC	8	-	56071737-56071786		Homo sapiens cDNA clone IMAGE:4794367					
Homo sapiens	RefSeq	NM_004043.1	ILMN_20147	ASMT	NM_004043.1	NM_004043.1		438	4757791	NM_004043.1	ASMT	NP_004034.1	ILMN_1690595	0006220546	S	1022	GTCCTCCATGACTGGGCAGACGGAAAGTGCTCACACCTGCTGGAGAGGAT	YX	+	1703203-1703252	Xp22.33d,Yp11.32a-p11.31c	Homo sapiens acetylserotonin O-methyltransferase (ASMT), mRNA.		The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [pmid 8397829] [evidence TAS]; The chemical reactions and pathways resulting in the formation of melatonin (N-acetyl-5-methoxytryptamine) [goid 30187] [evidence IEA]; Any process pertinent to the generation and maintenance of rhythms in the physiology of an organism [goid 48511] [evidence IEA]	The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + N-acetylserotonin = S-adenosyl-L-homocysteine + melatonin (N-acetyl-5-methoxytryptamine) [goid 17096] [evidence IEA]	HIOMTY; HIOMT; ASMTY	HIOMTY; HIOMT; ASMTY
Homo sapiens	RefSeq	NM_004229.3	ILMN_6463	MED14	NM_004229.3	NM_004229.3		9282	154813206	NM_004229.3	MED14	NP_004220.2	ILMN_3246388	0004540414	S	6614	GTCTTTTGCCTCTTTTGTTACCCAGGTTCGATCAAGGGGACTGGATGCCC	X	-	40508899-40508948	Xp11.4b	Homo sapiens mediator complex subunit 14 (MED14), mRNA. XM_942921	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [pmid 10198638] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10235267] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process involved in starting transcription from the RNA polymerase II promoter [goid 6367] [pmid 12218053] [evidence IDA]; Any series of molecular signals generated as a consequence of an androgen binding to its receptor [goid 30521] [pmid 12218053] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 12037571] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 12218053] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16109376] [evidence IPI]; Functions to mediate the interaction of transcriptional activators with the RNA polymerase II-general RNA polymerase II transcription factor complex [goid 16455] [pmid 10198638] [evidence IDA];  [goid 30374] [pmid 10235266] [evidence NAS]; Interacting selectively with the vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes [goid 42809] [pmid 10235266] [evidence NAS]; Interacting selectively with a thyroid hormone receptor [goid 46966] [pmid 10198638] [evidence IDA]	CXorf4; CRSP150; DRIP150; EXLM1; CRSP2; MGC104513; RGR1; TRAP170; CSRP	CXorf4; CRSP150; DRIP150; EXLM1; MGC104513; RGR1; MED14; TRAP170; CSRP
Homo sapiens	RefSeq	XM_001716446.1	ILMN_336908	LOC100129988	XM_001716446.1	XM_001716446.1		100129988	169167083	XM_001716446.1	LOC100129988	XP_001716498.1	ILMN_3255202	0004120706	M	1549	CGGATTTTCAGACATACGGAAGTGGATTTGTGGGAGACAGGAGGGGACAC				4q27b	PREDICTED: Homo sapiens hypothetical LOC100129988 (LOC100129988), mRNA.					
Homo sapiens	RefSeq	XM_001718945.1	ILMN_334404	LOC653924	XM_001718945.1	XM_001718945.1		653924	169163817	XM_001718945.1	LOC653924	XP_001718997.1	ILMN_3274929	0003850670	M	644	GGGATCTTCGAGTGTGCGGACCCAAAGCTTGCCATCAGTGCTATCTGGAC				2q11.2b	PREDICTED: Homo sapiens hypothetical LOC653924 (LOC653924), mRNA.					
Homo sapiens	RefSeq	XM_940946.1	ILMN_32765	LOC651728	XM_940946.1	XM_940946.1		651728	88952664	XM_940946.1	LOC651728	XP_946039.1	ILMN_1780274	0002480270	S	1246	TACCTGCTTCAGAGGCTGATTCCACACTGGAGGCCAAAGGACCAGGAGCC					PREDICTED: Homo sapiens hypothetical LOC651728 (LOC651728), mRNA.					
Homo sapiens	RefSeq	NR_003665.1	ILMN_309640	LOC441089	NR_003665.1	NR_003665.1		441089	153792508	NR_003665.1	LOC441089		ILMN_3244506	0006660086	S	1211	CCGTGTGTGTCGGCAGTGCTGGTGTCTTGTCGTTTCCGCGAGCTATTACT	5	-	79682281-79682330	5q14.1e	Homo sapiens CRSP8 pseudogene (LOC441089), non-coding RNA.				CRSP8P	CRSP8P
Homo sapiens	RefSeq	NM_058180.3	ILMN_167037	C21ORF58	NM_058180.3	NM_058180.3		54058	47080100	NM_058180.3	C21orf58	NP_478060.2	ILMN_3307877	0007560612	S	2832	AGCTCTGGGGGCTGAGGTGGGAGGATTGCTTGAGCCCAGGAGTTAGAAGC	21	-	47721133-47721182	21q22.3f	Homo sapiens chromosome 21 open reading frame 58 (C21orf58), mRNA.					
Homo sapiens	RefSeq	NM_017953.2	ILMN_20839	ZNHIT6	NM_017953.2	NM_017953.2		54680	20149642	NM_017953.2	ZNHIT6	NP_060423.2	ILMN_3235065	0000780259	S	2230	GTACAACGCACCGTCTAGCCACAGGAGAACTAATCTTCTATCAGTTGCCC	1	-	86119008-86119057	1p22.3d	Homo sapiens zinc finger, HIT type 6 (ZNHIT6), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NY-BR-75; FLJ20729; MGC131963; FLJ20760	NY-BR-75; FLJ20729; MGC131963; FLJ20760
Homo sapiens	RefSeq	NM_017953.2	ILMN_20839	ZNHIT6	NM_017953.2	NM_017953.2		54680	20149642	NM_017953.2	ZNHIT6	NP_060423.2	ILMN_1668540	0000150681	S	2487	CTGTGCCTTTCATCACATTCCTAGCCCACTCTCATCATTACTGCAGAAGG	1	-	86118751-86118800	1p22.3d	Homo sapiens zinc finger, HIT type 6 (ZNHIT6), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	NY-BR-75; FLJ20729; MGC131963; FLJ20760	NY-BR-75; FLJ20729; MGC131963; FLJ20760
Homo sapiens	RefSeq	XM_928000.1	ILMN_40998	LOC653543	XM_928000.2	XM_928000.2		653543	113415895	XM_928000.2	LOC653543	XP_933093.2	ILMN_1768018	0002470040	S	435	GACAGACCCGGCCACGGAGGAGCCACACGCAGGACGACGGAGGCGTGATT	4	+	191225408-191225457	4q35.2d	PREDICTED: Homo sapiens similar to double homeobox 4c (LOC653543), mRNA.					
Homo sapiens	RefSeq	XM_928003.1	ILMN_40998	LOC653543	XM_928000.2	XM_928000.2		653543	113415895	XM_928000.2	LOC653543	XP_933093.2	ILMN_1806813	0005910386	S	371	CTTCACCCGCGCGGTTCACAGACCCCACATCCCCAGGCTGAGCCCTGCAA	4	+	191225344-191225393	4q35.2d	PREDICTED: Homo sapiens similar to double homeobox 4c (LOC653543), mRNA.					
Homo sapiens	RefSeq	XM_930470.1	ILMN_32051	LOC645441	XM_930470.2	XM_930470.2		645441	113408771	XM_930470.2	LOC645441	XP_935563.1	ILMN_1789677	0006250035	I	488	TGAGCTCAAATGTGACCTGTCACCTGTTTCTGTATGTCCTGTTAGCTAAG	1	+	77367120-77367169	1p31.1f	PREDICTED: Homo sapiens similar to 60S ribosomal protein L17 (L23), transcript variant 1 (LOC645441), mRNA.					
Homo sapiens	RefSeq	NM_001077504.1	ILMN_180120	TAC4	NM_001077504.1	NM_001077504.1		255061	117938259	NM_001077504.1	TAC4	NP_001070972.1	ILMN_2304878	0006270403	A	252	AGGTTCAGAGTAAAAGCCCCCACCACAGACTTCCCAGAGGACACGGTGCC	17	-	47915966-47916003:47916004-47916015	17q21.33a	Homo sapiens tachykinin 4 (hemokinin) (TAC4), transcript variant gamma, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a tachykinin, i.e. a short peptide with the terminal sequence (Phe-X-Gly-Leu-Met-NH2), binding to a cell surface receptor [goid 7217] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the regulated release of saliva [goid 46878] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]	PPT-C; MGC133010; EK; HK-1; MGC133009	PPT-C; MGC133010; EK; HK-1; MGC133009
Homo sapiens	RefSeq	NM_019111.3	ILMN_7314	HLA-DRA	NM_019111.3	NM_019111.3		3122	52426773	NM_019111.3	HLA-DRA	NP_061984.2	ILMN_2157441	0002570564	S	942	CCTCAGTGAAAGCAGTCATCTTCAGCATTTTCCAGCCCTATAGCCACCCC	6	+	32412513-32412562	6p21.32b	Homo sapiens major histocompatibility complex, class II, DR alpha (HLA-DRA), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 8890155] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8890155] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 6304715] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 6812963] [evidence NAS]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 6812963] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 6304715] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 6812963] [evidence NAS]; Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 6304715] [evidence NAS]	HLA-DRA1	HLA-DRA1
Homo sapiens	RefSeq	NM_019111.3	ILMN_7314	HLA-DRA	NM_019111.3	NM_019111.3		3122	52426773	NM_019111.3	HLA-DRA	NP_061984.2	ILMN_1689655	0000270168	S	744	CCTGGGCCTGACTGTGGGTCTGGTGGGCATCATTATTGGGACCATCTTCA	6	+	32411585-32411634	6p21.32b	Homo sapiens major histocompatibility complex, class II, DR alpha (HLA-DRA), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; A cytoplasmic, membrane-bounded organelle that is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions [goid 5764] [pmid 8890155] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8890155] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 6304715] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 6812963] [evidence NAS]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen [goid 42613] [evidence IEA]	The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 6812963] [evidence NAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 6304715] [evidence NAS]; The process by which an antigen-presenting cell expresses antigen (peptide or polysaccharide) on its cell surface in association with an MHC class II protein complex [goid 2504] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]	Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 6812963] [evidence NAS]; Combining with an MHC class II protein complex to initiate a change in cellular activity [goid 32395] [pmid 6304715] [evidence NAS]	HLA-DRA1	HLA-DRA1
Homo sapiens	RefSeq	XM_928931.1	ILMN_39446	LOC645964	XM_928931.1	XM_928931.1		645964	89058912	XM_928931.1	LOC645964	XP_934024.1	ILMN_1781692	0002350619	S	219	ATCAGTGCTGGCTGCTGAGTCTTTGAAAGCGGACCCACGGTGGCAGCATG	22	-	22649205-22649254	22q11.23a-q11.23b	PREDICTED: Homo sapiens similar to glutathione S-transferase, theta 3 (LOC645964), mRNA.					
Homo sapiens	RefSeq	XM_938891.1	ILMN_307226	SMCHD1	NM_015295.2	NM_015295.2		23347	148839304	NM_015295.2	SMCHD1	NP_056110.2	ILMN_1808148	0003390689	A	7965	TTCCCTTGAGCGACAGTGGCCTCACTACATTGCCCAGGCTAGTCTTGAAC	18	+	2740413-2740462	18p11.32a	Homo sapiens structural maintenance of chromosomes flexible hinge domain containing 1 (SMCHD1), mRNA.	A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	A process that is carried out at the cellular level that results in the formation, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information [goid 51276] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	KIAA0650; DKFZp686O0631	
Homo sapiens	Unigene	Hs.306394	ILMN_85597	HS.306394	Hs.306394		Hs.306394		7020454	AK000394			ILMN_1821321	0005720601	S	2020	GACCCCTCTGCCCAGGATGTTAAGGGCTGCTGGAAAATGCCTTTGGTGGC	1	-	94859474-94859523		Homo sapiens cDNA FLJ20387 fis, clone KAIA4452					
Homo sapiens	RefSeq	NR_024151.1	ILMN_363854	HSPA7	NR_024151.1	NR_024151.1		3311	205277328	NR_024151.1	HSPA7		ILMN_3235964	0007200079	S	2213	CTAGACTGTCTTCTATGATCCTGCCCTTCAGAGATGAAGGGCTTGGGGGG	1	+	161578061-161578110		Homo sapiens heat shock 70kDa protein 7 (HSP70B) (HSPA7), non-coding RNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]		
Homo sapiens	RefSeq	XM_001722914.1	ILMN_352292	LOC100129773	XM_001722914.1	XM_001722914.1		100129773	169212673	XM_001722914.1	LOC100129773	XP_001722966.1	ILMN_3273069	0006420717	M	1	TTTGTCTAAGCTTTCAATGACAGATATTTTAATTGTGGAATTTTTAAAGC	18	-	9528062-9528111	18p11.22b	PREDICTED: Homo sapiens hypothetical protein LOC100129773 (LOC100129773), mRNA.					
Homo sapiens	RefSeq	NM_019006.2	ILMN_16822	ZFAND6	NM_019006.2	NM_019006.2		54469	21359917	NM_019006.2	ZFAND6	NP_061879.2	ILMN_1778803	0005860730	S	455	AAGCCCACCTGCAACCTCTGTCAGTAGTCTGTCTGAATCTTTACCAGTTC	15	+	78199885-78199895:78201109-78201147	15q25.1b	Homo sapiens zinc finger, AN1-type domain 6 (ZFAND6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZA20D3; AWP1; ZFAND5B	ZA20D3; AWP1; ZFAND5B
Homo sapiens	RefSeq	NM_019006.2	ILMN_16822	ZFAND6	NM_019006.2	NM_019006.2		54469	21359917	NM_019006.2	ZFAND6	NP_061879.2	ILMN_2156953	0004810674	S	1302	TCTCTGCAGCACGATTTCTCTTTTGATAATGCCCTTTAGGGCACAACTAG	15	+	78217389-78217438	15q25.1b	Homo sapiens zinc finger, AN1-type domain 6 (ZFAND6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZA20D3; AWP1; ZFAND5B	ZA20D3; AWP1; ZFAND5B
Homo sapiens	RefSeq	XM_933320.1	ILMN_36736	LOC645981	XM_933320.1	XM_933320.1		645981	89033896	XM_933320.1	LOC645981	XP_938413.1	ILMN_1734196	0000450504	S	210	AAGCTGCCATCAGCCTGAGTCCAGGATGACTGTGCACAGAAGGGTTGCCC	11	+	32025030-32025079		PREDICTED: Homo sapiens hypothetical protein LOC645981 (LOC645981), mRNA.					
Homo sapiens	RefSeq	XM_945086.1	ILMN_43436	LOC651991	XM_945086.1	XM_945086.1		651991	89036505	XM_945086.1	LOC651991	XP_950179.1	ILMN_1730972	0005360463	S	289	TCCTGTTAGATCAGGTCCCTGCTGAAGATGAGGAGGAAGAATTACTGGTG					PREDICTED: Homo sapiens hypothetical protein LOC651991 (LOC651991), mRNA.					
Homo sapiens	Unigene	Hs.560503	ILMN_114283	HS.560503	Hs.560503		Hs.560503		19760814	BQ025535			ILMN_1855791	0001070168	S	315	GCTGCACCGATCCAGTGAGTGTCTGGGTAAATGCCTTCACTGCTCTGGGC	17	+	36331011-36331060		UI-1-BB1p-axy-f-04-0-UI.s2 NCI_CGAP_Pl6 Homo sapiens cDNA clone UI-1-BB1p-axy-f-04-0-UI 3, mRNA sequence					
Homo sapiens	Unigene	Hs.540805	ILMN_105365	HS.540805	Hs.540805		Hs.540805		7458380	AW665831			ILMN_1825067	0001470364	S	25	TGCACTGAGGGGTAGGGGAAAAAGGCAGGAAGGGGAGGGTGGAGTCACCT	17	+	44692112-44692161		hi94e01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2979960 3, mRNA sequence					
Homo sapiens	RefSeq	NM_023919.2	ILMN_18014	TAS2R7	NM_023919.2	NM_023919.2		50837	68160950	NM_023919.2	TAS2R7	NP_076408.1	ILMN_1739653	0004050241	S	669	GATCCTCTCCCTGCGGAGACATATCAGGCGAATGCAGCTCAGTGCCACAG	12	-	10954508-10954557	12p13.2c	Homo sapiens taste receptor, type 2, member 7 (TAS2R7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required for an organism to receive a gustatory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Gustation involves the direct detection of chemical composition, usually through contact with chemoreceptor cells [goid 50909] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 10761934] [evidence TAS]	T2R7; MGC142121; TRB4	T2R7; MGC142121; TRB4
Homo sapiens	RefSeq	NM_000420.2	ILMN_15849	KEL	NM_000420.2	NM_000420.2		3792	17025233	NM_000420.2	KEL	NP_000411.1	ILMN_1738468	0006040468	S	2329	AGCACCCCAGCCTTTGCCAGGTATTTCCGCTGTGCACGTGGTGCTCTCTT	7	-	142638369-142638418	7q34f	Homo sapiens Kell blood group, metallo-endopeptidase (KEL), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1712490] [evidence TAS]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 1712490] [evidence TAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A decrease in the diameter of blood vessels, especially arteries, usually causing an increase in blood pressure [goid 42310] [pmid 15769748] [evidence TAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7737196] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ECE3; CD238	ECE3; CD238
Homo sapiens	RefSeq	NM_021235.1	ILMN_20498	EPS15L1	NM_021235.1	NM_021235.1		58513	10864046	NM_021235.1	EPS15L1	NP_067058.1	ILMN_1708369	0003190301	S	2523	CCCATTTGTCCCCTCCTCTGCAGCTAAACCTTCTAAGGCCTCTGCCTCGG	19	-	16472609-16472658	19p13.11f	Homo sapiens epidermal growth factor receptor pathway substrate 15-like 1 (EPS15L1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 12218189] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10567358] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15962011] [evidence EXP]; An invagination of the cell membrane of many eukaryotic cells, concerned in receptor-mediated selective transport of many proteins and other macromolecules across the cell membrane. During endocytosis it is converted into a coated vesicle. The coat is of clathrin [goid 5905] [evidence IEA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	EPS15R	EPS15R
Homo sapiens	RefSeq	XM_944252.1	ILMN_42964	LOC650548	XM_944252.1	XM_944252.1		650548	89036944	XM_944252.1	LOC650548	XP_949345.1	ILMN_1735813	0000670064	S	774	TCGCCCACCTCCCTGTGGCCTCGGGCGGGCCACGCTGTCATCCCTTGGCT					PREDICTED: Homo sapiens hypothetical protein LOC650548 (LOC650548), mRNA.					
Homo sapiens	Unigene	Hs.131041	ILMN_77085	HS.131041	Hs.131041		Hs.131041		10293219	AV691356			ILMN_1911059	0006590689	S	511	CCCTCACATCCTCAACTCAGCCAAGAGCTGGTTTCTTCCAGAGAGCCCTG	19	-	59641760-59641809		AV691356 GKC Homo sapiens cDNA clone GKCCBC07 5, mRNA sequence					
Homo sapiens	RefSeq	XM_939150.1	ILMN_41657	LOC650061	XM_939150.1	XM_939150.1		650061	89037813	XM_939150.1	LOC650061	XP_944243.1	ILMN_1698941	0003990468	S	453	GGCAACAGCTGCTTCCAGAAAACAGCCCTGTAATTGTCACCATCAGATCC					PREDICTED: Homo sapiens hypothetical protein LOC650061 (LOC650061), mRNA.					
Homo sapiens	RefSeq	XM_937316.1	ILMN_44455	LOC113230	XM_053966.11	XM_053966.11		113230	113428127	XM_053966.11	LOC113230	XP_053966.4	ILMN_1803673	0006580047	A	1257	CCATTGGGAAACTGACCACCACCCACAACTCCGCCAGTGAAACTGCCCAG	19	+	14046706-14046755	19p13.12c	PREDICTED: Homo sapiens hypothetical protein LOC113230 (LOC113230), mRNA.					
Homo sapiens	RefSeq	XM_944206.1	ILMN_137034	MAP2K3	XM_944206.1	XM_944206.1		5606	89042496	XM_944206.1	MAP2K3	XP_949299.1	ILMN_1740696	0004200544	I	887	ATCCCTGGCTTGGGTAGGGTGAGGGCAGATGTGGCAGAAGTCCAGGTGTA				17p11.2b	PREDICTED: Homo sapiens mitogen-activated protein kinase kinase 3 (MAP2K3), mRNA.		The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7839144] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of cytokines [goid 42035] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [pmid 11980910] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11980910] [evidence IDA]; Muscle contraction of cardiac muscle tissue [goid 60048] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [evidence IEA]; Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in MAP kinases. It is a dual-specificity mitogen-activated protein kinase kinase and requires activation by the serine/threonine kinase, MAP kinase kinase kinase [goid 4708] [pmid 7839144] [evidence TAS]; Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [goid 4713] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11980910] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_939106.1	ILMN_46353	LOC650014	XM_939106.1	XM_939106.1		650014	89061581	XM_939106.1	LOC650014	XP_944199.1	ILMN_1696486	0000780347	S	36	CGTGTGGAAAAAGGAGTGTGAGAAACAGCTGGAGTACCGCAAAAAGCCCC					PREDICTED: Homo sapiens similar to Huntingtin-interacting protein 1-related protein (Hip1-related) (Hip 12) (LOC650014), mRNA.					
Homo sapiens	RefSeq	NM_001010903.2	ILMN_12577	C6ORF222	NM_001010903.3	NM_001010903.3		389384	144922722	NM_001010903.3	C6orf222	NP_001010903.2	ILMN_1671087	0003420136	S	3255	CATGGGGGAAAGGGTGTTAAACCTGGATGGCAAGTGAGATCTTGTGACCC	6	-	36391943-36391992	6p21.31a	Homo sapiens chromosome 6 open reading frame 222 (C6orf222), mRNA.				DKFZp779B1540	
Homo sapiens	RefSeq	NM_022471.2	ILMN_20782	GMCL1L	NM_022471.2	NM_022471.2		64396	21314703	NM_022471.2	GMCL1L	NP_071916.2	ILMN_1778105	0003520273	S	2664	AGGTCAGAGGATCTAACATAGAAGCTGATGACGCATTAATGTAAAAATGG	5	-	177544317-177544366	5q35.3b	Homo sapiens germ cell-less homolog 1 (Drosophila)-like (GMCL1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	GCL; GMCL2	GCL; GMCL2
Homo sapiens	RefSeq	NM_032482.1	ILMN_28624	DOT1L	NM_032482.1	NM_032482.1		84444	22094134	NM_032482.1	DOT1L	NP_115871.1	ILMN_1693559	0003940575	S	4606	GGCAGCTTTTCCGGGGTGGCAGGCGGCACAGTTGGAGGTAACTAGGATTT	19	+	2178090-2178126:2180784-2180791:2180792-2180796	19p13.3g	Homo sapiens DOT1-like, histone H3 methyltransferase (S. cerevisiae) (DOT1L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Catalysis of the transfer of a methyl group (CH3-) to a histone [goid 42054] [evidence IEA]	DOT1; KIAA1814	DOT1; KIAA1814
Homo sapiens	RefSeq	NM_052955.1	ILMN_14598	TGM7	NM_052955.1	NM_052955.1		116179	16445034	NM_052955.1	TGM7	NP_443187.1	ILMN_1691164	0004540242	S	1839	ATTGAGGTGTCTGAGAGGGCTGAGGTGGGCAAGGCGCTGAGAGTCCATGT	15	-	41356441-41356485:41358607-41358611	15q15.2b	Homo sapiens transglutaminase 7 (TGM7), mRNA.		A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The formation of a covalent cross-link between or within protein chains [goid 18149] [evidence IEA]	Catalysis of the reaction: protein glutamine + alkylamine = protein N5-alkylglutamine + NH3. This reaction is the formation of the N6-(L-isoglutamyl)-L-lysine isopeptide, resulting in cross-linking polypeptide chains; the gamma-carboxamide groups of peptidyl-glutamine residues act as acyl donors, and the 6-amino-groups of peptidyl-lysine residues act as acceptors, to give intra- and intermolecular N6-(5-glutamyl)lysine cross-links [goid 3810] [evidence IEA]; Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	TGMZ	TGMZ
Homo sapiens	RefSeq	NM_015703.3	ILMN_162382	CGI-96	XM_001125724.1	XM_001125724.1		27341	113429618	XM_001125724.1	CGI-96	XP_001125724.1	ILMN_1656521	0003140669	A	308	CAGGAGAAGCCGGACCTGGCTGAGAGCCCAAAGGAGTCAAGGTCGAAGTT				22q13.2b	PREDICTED: Homo sapiens CGI-96 protein (CGI-96), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]		Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]		MGC150422; BK126B4.3; MGC150423
Homo sapiens	RefSeq	NM_021115.3	ILMN_27742	SEZ6L	NM_021115.3	NM_021115.3		23544	55956782	NM_021115.3	SEZ6L	NP_066938.2	ILMN_1684320	0000830095	S	3098	GATGTCGCTACTATTCCAACCTCCGCCTGCCTCTGATGTACTCCCACCCC	22	+	25101655-25101655:25103639-25103687	22q12.1a	Homo sapiens seizure related 6 homolog (mouse)-like (SEZ6L), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	Unigene	Hs.532698	ILMN_101903	HS.532698	Hs.532698		Hs.532698		16553442	AK057677			ILMN_1862217	0003940762	S	2274	CTGGGCTCCACCATTCCTAACTCCAGGTAGACAAGATAGATGTCACACAC	15	+	61388061-61388110		Homo sapiens cDNA FLJ33115 fis, clone TRACH2001314					
Homo sapiens	RefSeq	XM_001716333.1	ILMN_347870	LOC731511	XM_001716333.1	XM_001716333.1		731511	169202236	XM_001716333.1	LOC731511	XP_001716385.1	ILMN_3304092	0006840017	M	646	AGATATGTCATCAGCCTCTGGCAGGCCCTGCTGTGGGCTTTGGGGGCACA	11	-	67268766-67268815	11q13.2a	PREDICTED: Homo sapiens hypothetical LOC731511 (LOC731511), mRNA.					
Homo sapiens	RefSeq	XM_370577.4	ILMN_30947	DKFZP781N1041	XM_370577.4	XM_370577.4		387712	89031610	XM_370577.4	DKFZp781N1041	XP_370577.4	ILMN_1711910	0006110445	A	3346	CCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATGTCCATCTTCTG	10	+	118631525-118631574	10q25.3b	PREDICTED: Homo sapiens similar to RIKEN cDNA 6430537H07 gene (DKFZp781N1041), mRNA.					
Homo sapiens	RefSeq	NM_016216.2	ILMN_19003	DBR1	NM_016216.2	NM_016216.2		51163	56549112	NM_016216.2	DBR1	NP_057300.2	ILMN_1678680	0003180564	S	1032	CTGGGCGCCTGTGGAATATGCCAGAAAATAATGGCCTGCATGCAAGGTGG	3	-	139364110-139364114:139364881-139364925	3q22.3b	Homo sapiens debranching enzyme homolog 1 (S. cerevisiae) (DBR1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10982890] [evidence IDA]	Splicing of RNA via a series of two transesterification reactions [goid 375] [pmid 10982890] [evidence IMP]; The joining together of exons from one or more primary transcripts of nuclear messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced [goid 398] [evidence IEA]	 [goid 8419] [pmid 10982890] [evidence IMP]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_052864.2	ILMN_177011	TIFA	NM_052864.2	NM_052864.2		92610	38202233	NM_052864.2	TIFA	NP_443096.1	ILMN_1686454	0006420594	S	2732	GGGTTTACAGCCAGATCACCCGGCTTGAATTGCTTACAGTGTGTAGTCTC	4	-	113416522-113416571	4q25f	Homo sapiens TRAF-interacting protein with forkhead-associated domain (TIFA), mRNA.		A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16643855] [evidence IPI]	MGC20791; T2BP	MGC20791; T2BP
Homo sapiens	RefSeq	NM_005737.3	ILMN_15416	ARL4C	NM_005737.3	NM_005737.3		10123	38569403	NM_005737.3	ARL4C	NP_005728.2	ILMN_1768391	0001300192	S	3665	TTGGAGTGGTCACCAGGGGGACAGGGAGCCCCCCACCAATGTATCAATGG	2	-	235401979-235402028	2q37.1e	Homo sapiens ADP-ribosylation factor-like 4C (ARL4C), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10462049] [evidence TAS]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 10462049] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	ARL7; LAK	ARL7; LAK
Homo sapiens	RefSeq	XM_941911.1	ILMN_32871	LOC652460	XM_941911.1	XM_941911.1		652460	89062816	XM_941911.1	LOC652460	XP_947004.1	ILMN_1791634	0004280091	S	3664	AAGACCATCAGCCTGGTGATCCGCGCTCGAGGCCACCAAGGCCTCTCTGA					PREDICTED: Homo sapiens similar to Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1) (LOC652460), mRNA.					
Homo sapiens	RefSeq	NM_080476.4	ILMN_28239	PIGU	NM_080476.4	NM_080476.4		128869	52426746	NM_080476.4	PIGU	NP_536724.1	ILMN_1738263	0003180554	S	1750	CCCAGACAGGAAGGAGAAGAGGCAGGTGAGCAGGGCTTGTTAGATTGTGG	20	-	33148378-33148427	20q11.22a-q11.22b	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class U (PIGU), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15034568] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor [goid 42765] [pmid 12802054] [evidence IMP]	A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [pmid 11483512] [evidence TAS]; A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [pmid 1846368] [evidence EXP]; Any process that modulates the frequency, rate or extent of the JAK-STAT signaling pathway [goid 46425] [pmid 15034568] [evidence IDA]	Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor [goid 3923] [pmid 12802054] [evidence TAS]; Interacting selectively with any glycosylphosphatidylinositol anchor. GPI anchors serve to attach membrane proteins to the lipid bilayer of cell membranes [goid 34235] [pmid 12802054] [evidence TAS]	GAB1; MGC40420; CDC91L1	CDC91L1; GAB1; MGC40420
Homo sapiens	RefSeq	XM_945105.1	ILMN_162172	LOC649580	XR_018901.1	XR_018901.1		649580	113415239	XR_018901.1	LOC649580		ILMN_1660307	0004640053	I	611	CTGTGACAGTCGCTGAAGATGTATGTCCGGGGGTGGCACATCTTGCAGAT					PREDICTED: Homo sapiens hypothetical LOC649580 (LOC649580), mRNA.					
Homo sapiens	RefSeq	XR_000571.1	ILMN_168917	LOC401447	XR_017786.1	XR_017786.1		401447	113419932	XR_017786.1	LOC401447		ILMN_1672474	0006550646	S	1339	AAGCCTGAGTTCAACGTCGGAAAAGTCGAAGGTACCCTGCCTCCCAACGC	8	+	7178657-7178706	8p23.1f	PREDICTED: Homo sapiens similar to ubiquitin-specific protease 17-like protein (LOC401447), misc RNA.					
Homo sapiens	RefSeq	XM_936413.1	ILMN_168917	LOC401447	XR_017786.1	XR_017786.1		401447	113419932	XR_017786.1	LOC401447		ILMN_1744445	0000990132	S	1272	GGTGGAAAGAGCCACTCAGGAAAGCACCTTAGACCACTGGAAATTCCTGC	8	+	7178590-7178639	8p23.1f	PREDICTED: Homo sapiens similar to ubiquitin-specific protease 17-like protein (LOC401447), misc RNA.					
Homo sapiens	RefSeq	NM_156036.1	ILMN_137467	HOXB6	NM_156036.1	NM_156036.1		3216	24797134	NM_156036.1	HOXB6	NP_724778.1	ILMN_1673885	0001030326	I	1674	ATAGAGGGCATCCCGGTACTGGCTGGAGTCTGTGTTCGAGGGTCGACTAG	17	-	44029092-44029141	17q21.32c	Homo sapiens homeo box B6 (HOXB6), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence NAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence NAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote [goid 8595] [evidence NAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	Hox-2.2; HOX2B; HOX2; HU-2	Hox-2.2; HOX2B; HOX2; HU-2
Homo sapiens	RefSeq	XM_940642.1	ILMN_31396	LOC654191	XM_940642.1	XM_940642.1		654191	89040665	XM_940642.1	LOC654191	XP_945735.1	ILMN_1762308	0003990241	S	1835	CATGATCGGCTCCCAGTGCACCCCCTTAAGGGTAAGCAGGCCGCATATCT					PREDICTED: Homo sapiens similar to similar to RIKEN cDNA 4933437K13 (LOC654191), mRNA.					
Homo sapiens	RefSeq	NM_207112.1	ILMN_15830	HAGHL	NM_207112.1	NM_207112.1		84264	46361986	NM_207112.1	HAGHL	NP_996995.1	ILMN_2298860	0000430392	I	1121	TAGGAAGGCATCTGGGGACTGCGTGTTGGGCTGAGTGAGCATCTCTGGCT	16	+	719136-719169:719170-719185	16p13.3f	Homo sapiens hydroxyacylglutathione hydrolase-like (HAGHL), transcript variant 1, mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC2605	MGC2605
Homo sapiens	RefSeq	NM_138736.1	ILMN_3743	GNAO1	NM_138736.1	NM_138736.1		2775	41281684	NM_138736.1	GNAO1	NP_620073.1	ILMN_1800381	0006580092	A	681	GCTCAGCGGCTATGACCAGGTGCTCCACGAAGACGAAACCACGAACCGCA	16	+	54928231-54928273:54932247-54932253	16q13a	Homo sapiens guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O (GNAO1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9050846] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 1899283] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	DKFZp686O0962; G-ALPHA-o; GNAO	DKFZp686O0962; G-ALPHA-o; GNAO
Homo sapiens	RefSeq	NM_138736.1	ILMN_3743	GNAO1	NM_138736.1	NM_138736.1		2775	41281684	NM_138736.1	GNAO1	NP_620073.1	ILMN_1742704	0005490133	I	899	CCGTGGCTTACATCCAGGCCCAGTACGAGAGCAAGAACAAGTCAGCCCAC	16	+	54935197-54935246	16q13a	Homo sapiens guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O (GNAO1), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9050846] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands [goid 7212] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [evidence IEA]; Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level [goid 9987] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 1899283] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	DKFZp686O0962; G-ALPHA-o; GNAO	DKFZp686O0962; G-ALPHA-o; GNAO
Homo sapiens	RefSeq	NM_032988.1	ILMN_25753	TBL2	NM_012453.2	NM_012453.2		26608	84874693	NM_012453.2	TBL2	NP_036585.1	ILMN_1764489	0001570162	A	1645	CTCTCTTCTTGCTGGCTGTGACTCCTCCCTGACTAGTGGCCAAGGTGCTT	7	-	72984620-72984669	7q11.23b	Homo sapiens transducin (beta)-like 2 (TBL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]			DKFZP43N024; WS-betaTRP; MGC134739; WBSCR13	DKFZP43N024; WS-betaTRP; WBSCR13
Homo sapiens	RefSeq	NM_016081.2	ILMN_182362	PALLD	NM_016081.3	NM_016081.3		23022	93102360	NM_016081.3	PALLD	NP_057165.3	ILMN_1698732	0003780053	S	5445	GCACCGGGTGGCAGATGTTCTATGCAGTGTGGTTCAAGTTTCTTTGACCG	4	+	169847698-169847747	4q32.3e	Homo sapiens palladin, cytoskeletal associated protein (PALLD), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11598191] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A filamentous structure formed of a two-stranded helical polymer of the protein actin and associated proteins. Actin filaments are a major component of the contractile apparatus of skeletal muscle and the microfilaments of the cytoskeleton of eukaryotic cells. The filaments, comprising polymerized globular actin molecules, appear as flexible structures with a diameter of 5-9 nm. They are organized into a variety of linear bundles, two-dimensional networks, and three dimensional gels. In the cytoskeleton they are most highly concentrated in the cortex of the cell just beneath the plasma membrane [goid 5884] [pmid 11598191] [evidence IDA]	A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 11598191] [evidence NAS]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11598191] [evidence IPI]; Interacting selectively with muscle isoforms of actinin. Muscle alpha-actinin isoforms are found in skeletal and cardiac muscle and are localized to the Z-disc [goid 51371] [pmid 16125169] [evidence TAS]	CGI-151; PNCA1; KIAA0992; FLJ22190; SIH002; FLJ38193; FLJ39139	CGI-151; KIAA0992; SIH002; FLJ39139
Homo sapiens	RefSeq	NM_005587.1	ILMN_17271	MEF2A	NM_005587.1	NM_005587.1		4205	5031906	NM_005587.1	MEF2A	NP_005578.1	ILMN_1661888	0006400132	S	1895	GCCCTTCTGTAAAGCGAATGAGGATGGACGCGTGGGTGACCTAAGGCTTC	15	+	98070456-98070499:98070500-98070505	15q26.3b	Homo sapiens myocyte enhancer factor 2A (MEF2A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1516833] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 1516833] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8575763] [evidence NAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	ADCAD1; RSRFC9; RSRFC4	ADCAD1; RSRFC9; RSRFC4
Homo sapiens	RefSeq	NM_194248.1	ILMN_27303	OTOF	NM_194323.1	NM_194323.1		9381	35493859	NM_194323.1	OTOF	NP_919304.1	ILMN_1663347	0001440615	A	4657	GCCCGTCAAGTGCTGCCCCTGCCTGTGTCTGGGTTTCTGTTGGCTGTTTT	2	-	26533624-26533673	2p23.3b	Homo sapiens otoferlin (OTOF), transcript variant 4, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10192385] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10192385] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10192385] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10192385] [evidence TAS]	The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 10192385] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10192385] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DFNB6; DFNB9; FER1L2; NSRD9	DFNB6; DFNB9; FER1L2; NSRD9
Homo sapiens	Unigene	Hs.565838	ILMN_118259	HS.565838	Hs.565838		Hs.565838		6986486	AW444724			ILMN_1829310	0000730278	S	245	CACTGTTGGGGAAGCATAGGGAGACTAATTTGAGGTCTGCCTCGTGCCGC	3	+	189034984-189034999		UI-H-BI3-ajx-c-08-0-UI.s1 NCI_CGAP_Sub5 Homo sapiens cDNA clone IMAGE:2733303 3, mRNA sequence					
Homo sapiens	Unigene	Hs.575479	ILMN_127660	HS.575479	Hs.575479		Hs.575479		80795707	DA466757			ILMN_1822193	0002070075	S	441	GTAGCCCCAGTGGAGAAGGTGGGACAAAGTGAGTTTCAGGAGAAGAAGGC	7	-	22661319-22661368		DA466757 D3OST3 Homo sapiens cDNA clone D3OST3000186 5, mRNA sequence					
Homo sapiens	RefSeq	NM_181799.1	ILMN_6628	UBE2C	NM_181799.1	NM_181799.1		11065	32967282	NM_181799.1	UBE2C	NP_861515.1	ILMN_2265654	0006900368	I	300	GTGGGGAGCATCAGAACCAGCTCAACAGTTTGTCTACTGTCCGGTCCCAG	20	+	43877439-43877488	20q13.12b	Homo sapiens ubiquitin-conjugating enzyme E2C (UBE2C), transcript variant 2, mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15029244] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10548110] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11340163] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12070128] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10793135] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11285280] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11535616] [evidence EXP]	The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 9122200] [evidence IDA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [pmid 15504738] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart [goid 7051] [pmid 15504738] [evidence NAS]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of cyclins, proteins whose levels in a cell varies markedly during the cell cycle, and which play key roles in regulating cell cycle phase transitions [goid 8054] [pmid 9122200] [evidence IDA]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [pmid 9122200] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that activates or increases the rate of progression from anaphase/telophase (high mitotic CDK activity) to G1 (low mitotic CDK activity) [goid 31536] [pmid 9122200] [evidence IMP]; The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome [goid 43687] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [pmid 15504738] [evidence NAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a protein [goid 51246] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 14593737] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 10793135] [evidence EXP]	Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of ATP-dependent isopeptide bond formation between the carboxy-terminal residues of a small conjugating protein such as ubiquitin or a ubiquitin-like protein, and a substrate lysine residue. This function may be performed alone or in conjunction with an E3, ubiquitin-like protein ligase [goid 19787] [evidence IEA]; Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [pmid 9122200] [evidence IDA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]	UBCH10; dJ447F3.2	UBCH10; dJ447F3.2
Homo sapiens	Unigene	Hs.22689	ILMN_71784	HS.22689	Hs.22689		Hs.22689		4500184	AL049390			ILMN_1898453	0005340020	S	1933	CTGCTTCCCTCTTCCGCATTTAAGGACGCTGTGATTGCATTAGACCCACC					Homo sapiens mRNA; cDNA DKFZp586O1318 (from clone DKFZp586O1318)					
Homo sapiens	RefSeq	NM_194299.1	ILMN_164481	SYCP2L	NM_001040274.1	NM_001040274.1		221711	94400924	NM_001040274.1	SYCP2L	NP_001035364.1	ILMN_1779743	0007560315	S	2776	GGGCTGCCTGAAGACGAAGAGAAAGAGCAAGGTTATTGTTGGCTCAGGCC	6	+	10974188-10974237	6p24.2a	Homo sapiens synaptonemal complex protein 2-like (SYCP2L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			dJ62D2.1; C6orf177; NO145	
Homo sapiens	RefSeq	NM_012292.2	ILMN_15437	HMHA1	NM_012292.2	NM_012292.2		23526	47834347	NM_012292.2	HMHA1	NP_036424.2	ILMN_1811392	0006380022	S	4051	ATTCTGGGAGCCGTGGATGGGGGCGGAGCTGGGGTTTGGTGCAGTTTCCA	19	+	1037414-1037463	19p13.3i	Homo sapiens histocompatibility (minor) HA-1 (HMHA1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0223; HA-1; HLA-HA1	KIAA0223; HA-1; HLA-HA1
Homo sapiens	RefSeq	NM_001031623.1	ILMN_990	ZNF451	NM_001031623.1	NM_001031623.1		26036	72255570	NM_001031623.1	ZNF451	NP_001026794.1	ILMN_1753567	0006060739	I	2743	TGGTCATCTACCAGGGCATCTAAACCAAGGAACATTTATTTGGGGCTTTC	6	+	57123483-57123532	6p12.1a	Homo sapiens zinc finger protein 451 (ZNF451), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA0576; COASTER; MGC26701; dJ417I1.1	KIAA0576; COASTER; MGC26701; dJ417I1.1
Homo sapiens	RefSeq	XM_930175.1	ILMN_176054	LOC390705	XR_015850.1	XR_015850.1		390705	113426058	XR_015850.1	LOC390705		ILMN_1671292	0006400524	S	604	AGGCCCTTCTTCGAGGTGCCCTCACCCCTGGGCGCCGTGGACCTGTACGA	16	-	32208547-32208596	16p11.2b	PREDICTED: Homo sapiens similar to protein phosphatase 2A 48 kDa regulatory subunit isoform 1; serine/threonine protein phosphatase 2A, 48kDa regulatory subunit; PP2A, subunit B, PR48 isoform; PP2A B subunit PR48; NY-REN-8 antigen (LOC390705), misc RNA.					
Homo sapiens	RefSeq	NR_002186.1	ILMN_16437	DKFZP586I1420	NR_002186.1	NR_002186.1		222161	54400743	NR_002186.1	DKFZP586I1420		ILMN_2216838	0007050139	S	2350	TATCACGGCTGCTAATACGATTGATATCCTGGACTCGGCACTGCTTTGCC	7	+	30378540-30378589	7p15.1b	Homo sapiens hypothetical protein DKFZp586I1420 (DKFZP586I1420), non-coding RNA.					
Homo sapiens	RefSeq	NR_002186.1	ILMN_16437	DKFZP586I1420	NR_002186.1	NR_002186.1		222161	54400743	NR_002186.1	DKFZP586I1420		ILMN_1803856	0004570064	S	2283	GGGAACAGTGAAGTGCAGCAGATGATGCTTCGAGGGTGGCTTTGAGGCCA	7	+	30378473-30378522	7p15.1b	Homo sapiens hypothetical protein DKFZp586I1420 (DKFZP586I1420), non-coding RNA.					
Homo sapiens	RefSeq	NM_145300.1	ILMN_3970	LOC200420	NM_145300.1	NM_145300.1		200420	21686980	NM_145300.1	LOC200420	NP_660343.1	ILMN_1774369	0004250400	S	1263	GGCAAGTTCGTAGAGACAGAATGTAGAACAGGGCTTTCCGGGGGCTGGAG	2	+	73765873-73765922	2p13.2a	Homo sapiens LOC200420 (LOC200420), mRNA.					
Homo sapiens	RefSeq	XM_945548.1	ILMN_33364	LOC144678	XM_945548.1	XM_945548.1		144678	89036545	XM_945548.1	LOC144678	XP_950641.1	ILMN_1788499	0006760075	A	1999	GCTATGGCGATGGGTCAAGGACCTGGTGGTTTTACAGAGAAGACCCTTGG					PREDICTED: Homo sapiens hypothetical protein LOC144678 (LOC144678), mRNA.					
Homo sapiens	RefSeq	NM_022788.3	ILMN_3251	P2RY12	NM_022788.3	NM_022788.3		64805	29029603	NM_022788.3	P2RY12	NP_073625.1	ILMN_2320164	0006450603	A	1000	CCATTTTGCCCGAATTCCTTACACCCTGAGCCAAACCCGGGATGTCTTTG	3	-	152538518-152538567	3q25.1c	Homo sapiens purinergic receptor P2Y, G-protein coupled, 12 (P2RY12), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [evidence IEA]; The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part [goid 7599] [pmid 11196645] [evidence NAS]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IEA]	Combining with adenosine and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 1609] [evidence IEA];  [goid 1621] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	SP1999; P2Y(cyc); P2Y(ADP); P2Y12; ADPG-R; P2T(AC); HORK3; P2Y(AC)	SP1999; P2Y(cyc); P2Y(ADP); P2Y12; ADPG-R; P2T(AC); HORK3; P2Y(AC)
Homo sapiens	RefSeq	NM_032601.2	ILMN_30172	MCEE	NM_032601.2	NM_032601.2		84693	21314761	NM_032601.2	MCEE	NP_115990.2	ILMN_1735347	0005290408	S	493	CCATCCTAAAGACTGTGGTGGAGTCCTTGTGGAACTGGAGCAAGCTTGAT	2	-	71190606-71190607:71190608-71190655	2p13.3c-p13.3b	Homo sapiens methylmalonyl CoA epimerase (MCEE), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving L-methylmalonyl-CoA, the levorotatory isomer of 2-carboxypropanoyl-CoA. S-methylmalonyl-CoA is an intermediate in the beta oxidation of odd-numbered fatty acids in animals [goid 46491] [pmid 11481338] [evidence NAS]	Catalysis of the reaction: (R)-2-methyl-3-oxopropanoyl-CoA = (S)-2-methyl-3-oxopropanoyl-CoA [goid 4493] [pmid 11481338] [evidence NAS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	GLOD2	GLOD2
Homo sapiens	RefSeq	NR_002225.2	ILMN_27668	RPS26L	NR_002225.2	NR_002225.2		400156	98162788	NR_002225.2	RPS26L		ILMN_2310703	0004670048	A	284	TCGATCTCGTGAAGCCCGCAAGGACCGAACACCCCCACCTCGATTTAGAC	13	-	99990206-99990255	13q32.3c	Homo sapiens 40S ribosomal protein S26-like (RPS26L), non-coding RNA.				RPS26	RPS26
Homo sapiens	RefSeq	NM_018245.1	ILMN_15789	OGDHL	NM_018245.1	NM_018245.1		55753	8922715	NM_018245.1	OGDHL	NP_060715.1	ILMN_1714577	0003400685	S	3356	AGCTGCTCCCATCTTGCTGGAATTTCTTGGGCGGCTTCTCCACCTGTATC	10	-	50612993-50613042	10q11.23a	Homo sapiens oxoglutarate dehydrogenase-like (OGDHL), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: 2-oxoglutarate + lipoamide = S-succinyldihydrolipoamide + CO2 [goid 4591] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with thiamin pyrophosphate, the diphosphoric ester of thiamin. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases [goid 30976] [evidence IEA]		
Homo sapiens	RefSeq	XR_040229.1	ILMN_349211	LOC349114	XR_040229.1	XR_040229.1		349114	169170351	XR_040229.1	LOC349114		ILMN_3233716	0000520504	I	2055	AAGCTTTCCCCCTGCACAGCAGCAGGGGTAGGGGGTATATACAAGAGGAG	7	+	39872565-39872614	7p14.1d	PREDICTED: Homo sapiens misc_RNA (LOC349114), miscRNA.					
Homo sapiens	RefSeq	XR_040229.1	ILMN_349211	LOC349114	XR_040229.1	XR_040229.1		349114	169170351	XR_040229.1	LOC349114		ILMN_3215627	0003990129	A	58	TCTCCGGGCCCAGAACCTCCTCAAGTTGGCCTCTCCAGACCCACTTGCAC	7	+	39870031-39870080	7p14.1d	PREDICTED: Homo sapiens misc_RNA (LOC349114), miscRNA.					
Homo sapiens	RefSeq	NM_001018108.2	ILMN_7601	SERF2	NM_001018108.2	NM_001018108.2		10169	149192865	NM_001018108.2	SERF2	NP_001018118.1	ILMN_3251501	0001300093	S	2342	GGAGGCACACCTGGGTTCAAATTCTAGCTCCAGCATATAAGTGGCTGTGC	15	+	41875327-41875376	15q15.3b	Homo sapiens small EDRK-rich factor 2 (SERF2), mRNA.				4F5REL; H4F5rel; FLJ37527; FLJ38557; FAM2C; MGC48826; HsT17089; FLJ20431	4F5REL; H4F5rel; FAM2C; MGC48826; HsT17089; FLJ20431
Homo sapiens	RefSeq	NM_001018108.1	ILMN_7601	SERF2	NM_001018108.2	NM_001018108.2		10169	149192865	NM_001018108.2	SERF2	NP_001018118.1	ILMN_1789136	0001580309	S	106	GCGGTAACCAGCGTGAGCTCGCCCGCCAGAAGAATATGAAAAAGCAGAGC	15	+	41872465-41872514	15q15.3b	Homo sapiens small EDRK-rich factor 2 (SERF2), mRNA.				4F5REL; H4F5rel; FLJ37527; FLJ38557; FAM2C; MGC48826; HsT17089; FLJ20431	4F5REL; H4F5rel; FAM2C; MGC48826; HsT17089; FLJ20431
Homo sapiens	Unigene	Hs.583158	ILMN_135339	HS.583158	Hs.583158		Hs.583158		83130418	DB298926			ILMN_1876064	0001030653	S	527	GGGGAACAAGGCAAAATTTAACTTCAAGGGGCCTTTTCTCGCAGCATTGC	7	+	111871987-111872032		DB298926 BRACE3 Homo sapiens cDNA clone BRACE3009497 3, mRNA sequence					
Homo sapiens	RefSeq	NM_021796.3	ILMN_24438	PLAC1	NM_021796.3	NM_021796.3		10761	54792738	NM_021796.3	PLAC1	NP_068568.1	ILMN_1754207	0001050609	S	790	CAGTGAAGAAGAGCATACCCAGGTCCCTTGTCACCAAGCAGGGGCTCAGG	X	-	133700159-133700208	Xq26.3a	Homo sapiens placenta-specific 1 (PLAC1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [pmid 10995572] [evidence IEP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]		
Homo sapiens	RefSeq	XM_929191.1	ILMN_36613	LOC646246	XM_929191.1	XM_929191.1		646246	89031624	XM_929191.1	LOC646246	XP_934284.1	ILMN_1696909	0004120519	S	121	ATAGGCCTGGGCTCCCTAGTAACAATGGGACTGATAGAGGTAGCACTTAC	10	+	122811661-122811710		PREDICTED: Homo sapiens hypothetical protein LOC646246 (LOC646246), mRNA.					
Homo sapiens	Unigene	Hs.299279	ILMN_85327	HS.299279	Hs.299279		Hs.299279		5544949	AI870981			ILMN_1834538	0006770646	S	239	GAGCTGTGAGAAGCCCAGGCAGGGGTGTGAGTAGAGAGGGAAGAGAATGG	9	+	101318077-101318126		wl78b08.x1 NCI_CGAP_Brn25 Homo sapiens cDNA clone IMAGE:2430999 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001040214.1	ILMN_176682	NKAIN2	NM_001040214.1	NM_001040214.1		154215	94158938	NM_001040214.1	NKAIN2	NP_001035304.1	ILMN_3249603	0000650632	S	3108	CAGCTGTATCCTCCTCAAAATCCGGTGAAGAATGCTATTTTTCTAGGCTG	6	+	125145828-125145877	6q22.31d-q22.31e	Homo sapiens Na+/K+ transporting ATPase interacting 2 (NKAIN2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TCBA1; FAM77B; MGC41924	TCBA1; FAM77B; MGC41924
Homo sapiens	RefSeq	XM_001721674.1	ILMN_352434	LOC729069	XM_001721674.1	XM_001721674.1		729069	169207194	XM_001721674.1	LOC729069	XP_001721726.1	ILMN_3306472	0004830278	M	239	TGAACTCTGGCAGTGTGGGAGCAAGAGCGGCTGGGACTCTCTGCTTTCCT				14q13.3b	PREDICTED: Homo sapiens hypothetical LOC729069 (LOC729069), mRNA.					
Homo sapiens	RefSeq	NM_022493.1	ILMN_1063	NARFL	NM_022493.1	NM_022493.1		64428	11968050	NM_022493.1	NARFL	NP_071938.1	ILMN_1813833	0002970475	S	1798	TGAGGCAGAGCAAGACGGGTTCTCACCCCTGACTTCTGGAGGCTTCCCTT	16	-	780012-780061	16p13.3f	Homo sapiens nuclear prelamin A recognition factor-like (NARFL), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 16956324] [evidence IDA]; A homeostatic process involved in the maintenance of an internal equilibrium of oxygen within an organism or cell [goid 32364] [pmid 16956324] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 43433] [pmid 16956324] [evidence IDA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [pmid 16956324] [evidence IDA]		HPRN; FLJ21988; PRN; LET1L; IOP1	HPRN; FLJ21988; PRN; LET1L; IOP1
Homo sapiens	RefSeq	XM_001718702.1	ILMN_347191	LOC100129053	XM_001718702.1	XM_001718702.1		100129053	169203655	XM_001718702.1	LOC100129053	XP_001718754.1	ILMN_3267076	0007510241	M	1674	CAGGGACACTGGTGGAGACTGGAAATCCCCGGTGAATCTGGCCAAGGTTG				11q21b	PREDICTED: Homo sapiens similar to hCG2041443 (LOC100129053), mRNA.					
Homo sapiens	RefSeq	NM_001829.2	ILMN_12827	CLCN3	NM_173872.2	NM_173872.2		1182	55770839	NM_173872.2	CLCN3	NP_776297.2	ILMN_1660837	0003440463	A	3805	AGTCTCGAAGGAAGCGAGAACGAAATCTCTCATTGTGTGCCGTGTGGCTC	4	+	170641911-170641960	4q33a	Homo sapiens chloride channel 3 (CLCN3), transcript variant e, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12471024] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12471024] [evidence NAS]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence ISS]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [pmid 12471024] [evidence IDA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12471024] [evidence TAS]; The lipid bilayer surrounding an early endosome [goid 31901] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [pmid 12471024] [evidence TAS]; Any process that reduces the pH of the endosomal lumen, measured by the concentration of the hydrogen ion [goid 48388] [pmid 12471024] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [pmid 7665160] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12471024] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 12471024] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence ISS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12471024] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 12471024] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISS]	ClC-3; CLC3	ClC-3; CLC3
Homo sapiens	RefSeq	NM_173872.2	ILMN_12827	CLCN3	NM_173872.2	NM_173872.2		1182	55770839	NM_173872.2	CLCN3	NP_776297.2	ILMN_1707467	0002320348	I	2899	AGAAGAACATATTAGAGCATCTCGAGCAACTAAAGCAGCACGTCGAACCC	4	+	170638966-170639015	4q33a	Homo sapiens chloride channel 3 (CLCN3), transcript variant e, mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12471024] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12471024] [evidence NAS]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence ISS]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [pmid 12471024] [evidence IDA]; The lipid bilayer surrounding any membrane-bounded vesicle in the cell [goid 12506] [evidence ISS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 12471024] [evidence TAS]; The lipid bilayer surrounding an early endosome [goid 31901] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; Any process that modulates the internal pH of an organism, part of an organism or a cell, measured by the concentration of the hydrogen ion [goid 6885] [pmid 12471024] [evidence TAS]; Any process that reduces the pH of the endosomal lumen, measured by the concentration of the hydrogen ion [goid 48388] [pmid 12471024] [evidence TAS]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel [goid 5247] [pmid 7665160] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12471024] [evidence IPI]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [pmid 12471024] [evidence IDA]; Interacting selectively with a PDZ domain of a protein, a domain found in diverse signaling proteins [goid 30165] [evidence ISS]; Interacting selectively with chloride ions (Cl-) [goid 31404] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12471024] [evidence NAS]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 12471024] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [evidence ISS]	ClC-3; CLC3	ClC-3; CLC3
Homo sapiens	RefSeq	NM_001004422.1	ILMN_26120	FMNL2	NM_052905.3	NM_052905.3		114793	94421465	NM_052905.3	FMNL2	NP_443137.2	ILMN_1730491	0002710605	A	5188	AGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCC	2	+	153213723-153213772	2q23.3d	Homo sapiens formin-like 2 (FMNL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a cellular component [goid 16043] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	FLJ37546; FHOD2	FHOD2
Homo sapiens	RefSeq	NM_144613.3	ILMN_22223	COX6B2	NM_144613.3	NM_144613.3		125965	40538807	NM_144613.3	COX6B2	NP_653214.2	ILMN_1725547	0002370653	S	1596	CTGAGACTCCCTGCTCCGCTGCCCTCTTTGTCTAAGAGCTGTGGCAACAG	19	-	60552784-60552833	19q13.42b	Homo sapiens cytochrome c oxidase subunit VIb polypeptide 2 (testis) (COX6B2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The region between the inner and outer lipid bilayers of the mitochondrial envelope [goid 5758] [evidence IEA]; Any of the inward folds of the mitochondrial inner membrane. Their number, extent, and shape differ in mitochondria from different tissues and organisms. They appear to be devices for increasing the surface area of the mitochondrial inner membrane, where the enzymes of electron transport and oxidative phosphorylation are found. Their shape can vary with the respiratory state of the mitochondria [goid 30061] [pmid 12874793] [evidence IDA]		Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O [goid 4129] [evidence IEA]	COXVIB2; FLJ32865; MGC119094	COXVIB2; FLJ32865; MGC119094
Homo sapiens	Unigene	Hs.131598	ILMN_77194	HS.131598	Hs.131598		Hs.131598		51471337	XM_373549			ILMN_1819223	0002070762	S	378	GGGGACCTTGCCTGTTGTATTCACTTCTATCTCCTAGAACAGCGGCTGGC					PREDICTED: Homo sapiens hypothetical LOC387887 (LOC387887), mRNA					
Homo sapiens	RefSeq	NM_173506.3	ILMN_18366	LYPD4	NM_173506.3	NM_173506.3		147719	40255169	NM_173506.3	LYPD4	NP_775777.2	ILMN_1809905	0002340609	S	1516	TCAGGCAGGGTTTCTCAATACCACCTTCCTCCTCATGGGGTGTGCTCGTG	19	-	47033216-47033259:47033849-47033854	19q13.2c	Homo sapiens LY6/PLAUR domain containing 4 (LYPD4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane [goid 31225] [evidence IEA]			MGC42718	MGC42718
Homo sapiens	RefSeq	NM_024588.3	ILMN_179203	FLJ23584	NM_024588.3	NM_024588.3		79640	46309610	NM_024588.3	FLJ23584	NP_078864.1	ILMN_1684155	0001660672	S	4715	GCTGCAAGGTCACTGCTGTACTGGGGCCACCCTTCCTAAGACAGAGAGTC	22	+	40423826-40423875	22q13.2b	Homo sapiens hypothetical protein FLJ23584 (FLJ23584), mRNA.					
Homo sapiens	RefSeq	XM_929910.1	ILMN_179203	FLJ23584	NM_024588.3	NM_024588.3		79640	46309610	NM_024588.3	FLJ23584	NP_078864.1	ILMN_1706699	0005810475	S	1227	ATGGGAGAGAACCAAGAACAGTTAAGATGTAAAATTGATGCAGAGACCCA	22	+	40420338-40420387	22q13.2b	Homo sapiens hypothetical protein FLJ23584 (FLJ23584), mRNA.					
Homo sapiens	RefSeq	NM_019065.2	ILMN_12534	NECAB2	NM_019065.2	NM_019065.2		54550	32129213	NM_019065.2	NECAB2	NP_061938.2	ILMN_1663437	0002690181	S	1468	CCACGCATGACCCACACTGACCACACCCTGCCCTCTTCGGTGACATTCTT	16	+	82593742-82593791	16q23.3b	Homo sapiens N-terminal EF-hand calcium binding protein 2 (NECAB2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms [goid 17000] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	EFCBP2; NECAB2	EFCBP2; NECAB2
Homo sapiens	RefSeq	NM_002727.2	ILMN_2142	SRGN	NM_002727.2	NM_002727.2		5552	45935370	NM_002727.2	SRGN	NP_002718.2	ILMN_1760347	0007550484	S	482	CCTTAGGTCTCTTGACAGGAATCTGCCCTCAGACAGCCAGGACTTGGGTC	10	+	70533801-70533850	10q21.3e	Homo sapiens serglycin (SRGN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11154222] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15136585] [evidence IDA]; Coarse, bluish-black staining cytoplasmic granules, bounded by a plasma membrane and found in mast cells and basophils. Contents include histamine, heparin, chondroitin sulfates, chymase and tryptase [goid 42629] [evidence ISS]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11911826] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization [goid 30502] [pmid 16870619] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a mast cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33364] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a T cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33371] [evidence ISS]; A process by which a protease is maintained in a secretory granule in a mast cell and prevented from moving elsewhere [goid 33373] [evidence ISS]; A process by which the protease granyme B is maintained in a secretory granule in a T cell and prevented from moving elsewhere [goid 33382] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11911826] [evidence IPI]	PRG1; PPG; PRG; FLJ12930; MGC9289	PRG1; PPG; PRG; FLJ12930; MGC9289
Homo sapiens	RefSeq	NM_002727.2	ILMN_2142	SRGN	NM_002727.2	NM_002727.2		5552	45935370	NM_002727.2	SRGN	NP_002718.2	ILMN_2169152	0000360500	S	188	GTACCAATGGGTGCGCTGCAATCCAGACAGTAATTCTGCAAACTGCCTTG	10	+	70526868-70526917	10q21.3e	Homo sapiens serglycin (SRGN), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11154222] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15136585] [evidence IDA]; Coarse, bluish-black staining cytoplasmic granules, bounded by a plasma membrane and found in mast cells and basophils. Contents include histamine, heparin, chondroitin sulfates, chymase and tryptase [goid 42629] [evidence ISS]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 11911826] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization [goid 30502] [pmid 16870619] [evidence IDA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a mast cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33364] [evidence ISS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a secretory granule in a T cell. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion [goid 33371] [evidence ISS]; A process by which a protease is maintained in a secretory granule in a mast cell and prevented from moving elsewhere [goid 33373] [evidence ISS]; A process by which the protease granyme B is maintained in a secretory granule in a T cell and prevented from moving elsewhere [goid 33382] [evidence ISS]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of cytokines from a cell or group of cells [goid 50710] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11911826] [evidence IPI]	PRG1; PPG; PRG; FLJ12930; MGC9289	PRG1; PPG; PRG; FLJ12930; MGC9289
Homo sapiens	RefSeq	NM_173564.2	ILMN_29448	C7ORF51	NM_173564.2	NM_173564.2		222950	37537553	NM_173564.2	C7orf51	NP_775835.2	ILMN_1755033	0004200368	S	3286	GAGAGAAGAAGGGGCCCAGGGAAGCAGAGGGCCCAAGACCATTCACAGTA	7	+	99452205-99452254	7q22.1c	Homo sapiens chromosome 7 open reading frame 51 (C7orf51), mRNA.				FLJ37538	FLJ37538
Homo sapiens	RefSeq	XR_015267.1	ILMN_184007	LOC728003	XR_015267.1	XR_015267.1		728003	113425409	XR_015267.1	LOC728003		ILMN_3249866	0004590068	A	210	CATTGCTAGTTGCAAATCTTAAACACCTCAGTGCTGAAGGATCCTGTATT	15	-	87546336-87546385	15q26.1a	PREDICTED: Homo sapiens misc_RNA (LOC728003), miscRNA.					
Homo sapiens	RefSeq	XM_938496.1	ILMN_184007	LOC728003	XR_015267.1	XR_015267.1		728003	113425409	XR_015267.1	LOC728003		ILMN_1785389	0002230139	S	53	ATATTTGATTCAATGGAATTTACCTAAAAAATAAAGACTAAAAATGTGGT	15	-	87546493-87546542	15q26.1a	PREDICTED: Homo sapiens misc_RNA (LOC728003), miscRNA.					
Homo sapiens	RefSeq	NM_014321.2	ILMN_26697	ORC6L	NM_014321.2	NM_014321.2		23594	32454755	NM_014321.2	ORC6L	NP_055136.1	ILMN_1731070	0004830343	S	670	GTGGTTGAAGCCCCAGCAAAGGAAATGGAGAAGGTAGAGGAGATGCCACA	16	+	45287477-45287498:45288871-45288898	16q11.2i	Homo sapiens origin recognition complex, subunit 6 like (yeast) (ORC6L), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15707391] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15226314] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11931757] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11095689] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10436018] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11125146] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12045100] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 15684404] [evidence EXP]; A multisubunit complex that is located at the replication origins of a chromosome in the nucleus [goid 5664] [evidence IEA]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15232106] [evidence IPI]	ORC6	ORC6
Homo sapiens	RefSeq	NM_015219.2	ILMN_25212	EXOC7	NM_001013839.1	NM_001013839.1		23265	62241045	NM_001013839.1	EXOC7	NP_001013861.1	ILMN_1815012	0001470259	A	4580	TGGAGCCCAGGGGTGATGGAGACTTTTGATGGCTTTTGGCAGGGACAGAC	17	-	71588832-71588881	17q25.1d	Homo sapiens exocyst complex component 7 (EXOC7), transcript variant 1, mRNA.	A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [pmid 18000879] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; cetriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome [goid 34451] [pmid 18000879] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		Exo70p; 2-5-3p; DKFZp686J04253; FLJ40965; EXO70; YJL085W; FLJ46415; EXOC1; EX070	Exo70p; 2-5-3p; DKFZp686J04253; EXO70; YJL085W; EX070; FLJ40965; FLJ46415; EXOC1
Homo sapiens	RefSeq	NM_001013839.1	ILMN_25212	EXOC7	NM_001013839.1	NM_001013839.1		23265	62241045	NM_001013839.1	EXOC7	NP_001013861.1	ILMN_1750011	0002760692	I	931	CCCAGCATGGTCTAGATGGGAAAAAGGGGGGCTCTAACCTCATTCCTCTG	17	-	71598822-71598871	17q25.1d	Homo sapiens exocyst complex component 7 (EXOC7), transcript variant 1, mRNA.	A protein complex peripherally associated with the plasma membrane that determines where secretory vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals [goid 145] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [pmid 18000879] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; cetriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome [goid 34451] [pmid 18000879] [evidence IDA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		Exo70p; 2-5-3p; DKFZp686J04253; FLJ40965; EXO70; YJL085W; FLJ46415; EXOC1; EX070	Exo70p; 2-5-3p; DKFZp686J04253; EXO70; YJL085W; EX070; FLJ40965; FLJ46415; EXOC1
Homo sapiens	RefSeq	NM_001007026.1	ILMN_7310	ATN1	NM_001007026.1	NM_001007026.1		1822	55750052	NM_001007026.1	ATN1	NP_001007027.1	ILMN_1737833	0004390543	A	4148	CTGTTAGATGTGGCTGTTTTGCGTAGCATCGTGTGCCACCCCTGCCCCTC	12	+	6921542-6921591	12p13.31d	Homo sapiens atrophin 1 (ATN1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10814707] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7647802] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 9404] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 7647802] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 9404] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a toxin receptor, a receptor for substances that cause injury to living organisms [goid 50827] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]; Interacting selectively with a toxin receptor, a receptor for substances that cause injury to living organisms [goid 50827] [evidence IEA]	DRPLA; NOD; B37; D12S755E	DRPLA; NOD; B37; D12S755E
Homo sapiens	RefSeq	NM_001007026.1	ILMN_7310	ATN1	NM_001007026.1	NM_001007026.1		1822	55750052	NM_001007026.1	ATN1	NP_001007027.1	ILMN_1711210	0006580040	I	7	ATACTGGACGCCAAGTGGGAGGAACTTCAAGGCTGTCCCCTGCGGGCCTC	12	+	6903893-6903942	12p13.31d	Homo sapiens atrophin 1 (ATN1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10814707] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7647802] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 9404] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 7647802] [evidence TAS]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]; The chemical reactions and pathways involving a toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism [goid 9404] [evidence IEA]	The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a toxin receptor, a receptor for substances that cause injury to living organisms [goid 50827] [evidence IEA]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [evidence IEA]; Interacting selectively with a specific domain of a protein [goid 19904] [pmid 11984006] [evidence IPI]; Interacting selectively with a toxin receptor, a receptor for substances that cause injury to living organisms [goid 50827] [evidence IEA]	DRPLA; NOD; B37; D12S755E	DRPLA; NOD; B37; D12S755E
Homo sapiens	Unigene	Hs.172749	ILMN_80386	HS.172749	Hs.172749		Hs.172749		5632018	AI912163			ILMN_1872450	0004540706	S	275	AGCGGCCACCGTGTCTACTGCACGGGACGGCGAGGGTCTGAATATCTTAC	5	-	319940-319989		wd71a12.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:2337022 3, mRNA sequence					
Homo sapiens	RefSeq	NM_006219.1	ILMN_22394	PIK3CB	NM_006219.1	NM_006219.1		5291	5453893	NM_006219.1	PIK3CB	NP_006210.1	ILMN_1763347	0004480523	S	3139	GAGGCGCTCAGGGAAAGCTGGACTACTAAAGTGAACTGGATGGCCCACAC	3	-	139856945-139856994	3q22.3c	Homo sapiens phosphoinositide-3-kinase, catalytic, beta polypeptide (PIK3CB), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12660731] [evidence EXP]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [pmid 10570282] [evidence TAS]; Any process that modulates the frequency, rate or extent of attachment of a cell to the extracellular matrix [goid 1952] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [pmid 10570282] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10570282] [evidence NAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 10570282] [evidence TAS]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [evidence IEA]; The first few specialized divisions of an activated animal egg [goid 40016] [evidence IEA]; The process of introducing one or more phosphate groups into a phosphoinositide, a class of substances comprising phosphatidylinositol and its derivatives [goid 46854] [evidence IEA]; A series of molecular signals in which a cell uses a phosphoinositide to convert an extracellular signal into a response [goid 48015] [evidence IEA]	Catalysis of the phosphorylation of myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4428] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol = ADP + 1-phosphatidyl-1D-myo-inositol 3-phosphate [goid 16303] [pmid 10570282] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with any of the insulin receptor substrate (IRS) proteins, adaptor proteins that bind to the transphosphorylated insulin and insulin-like growth factor receptors, are themselves phosphorylated and in turn recruit SH2 domain-containing signaling molecules to form a productive signaling complex [goid 43560] [evidence IEA]; Catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate = ADP + 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate [goid 46934] [evidence IEA]	DKFZp779K1237; PI3K; p110-BETA; PI3Kbeta; MGC133043; PIK3C1	DKFZp779K1237; PI3K; p110-BETA; PI3Kbeta; MGC133043; PIK3C1
Homo sapiens	RefSeq	NM_002082.2	ILMN_163347	GRK6	NM_002082.2	NM_002082.2		2870	51896034	NM_002082.2	GRK6	NP_002073.2	ILMN_2357015	0005700519	A	1721	TCCAAGAGCTGAATGTCTTTGGGCTGGATGGCTCAGTTCCCCCAGACCTG	5	+	176800545-176800594	5q35.3a	Homo sapiens G protein-coupled receptor kinase 6 (GRK6), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the frequency, rate or extent of G-protein coupled receptor protein signaling pathway activity [goid 8277] [pmid 8077221] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the phosphorylation of a G-protein coupled receptor, thereby modulating its activity [goid 4703] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ32135; GPRK6	FLJ32135; GPRK6
Homo sapiens	RefSeq	NR_024119.1	ILMN_366706	C7ORF4	NR_024119.1	NR_024119.1		64433	198041698	NR_024119.1	C7orf4		ILMN_3238082	0005820603	S	510	CCACTGGCATCACCAGCTCCCGCCGTGCTAAGTGGAATTTTCAGGTGGAG	7	+	156333694-156333743		Homo sapiens chromosome 7 open reading frame 4 (C7orf4), non-coding RNA.					
Homo sapiens	RefSeq	NM_173529.3	ILMN_168867	C18ORF54	NM_173529.3	NM_173529.3		162681	40255175	NM_173529.3	C18orf54	NP_775800.2	ILMN_2169089	0002760520	S	4776	GTTTTGGGTGGTGCCTCTTATACTATGTTGTATTCCTAGACAAGGAAATG	18	+	50162155-50162204	18q21.2c	Homo sapiens chromosome 18 open reading frame 54 (C18orf54), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MGC33382	MGC33382
Homo sapiens	Unigene	Hs.560163	ILMN_114087	HS.560163	Hs.560163		Hs.560163		4083486	AI346280			ILMN_1832712	0005290022	S	380	CCCCAGAATGGCTTCCAGGCTGATGAGGATGTGGGTGCATGGGTTTAAGG	13	+	32821122-32821126:32821132-32821176		qp49h09.x1 NCI_CGAP_Co8 Homo sapiens cDNA clone IMAGE:1926401 3, mRNA sequence					
Homo sapiens	RefSeq	NR_002940.1	ILMN_45485	LRRC37A4	NR_002940.1	NR_002940.1		55073	89994735	NR_002940.1	LRRC37A4		ILMN_2286783	0003890041	I	1723	TGACGGAGCCCTCACAGGTCCCATCTAAAATGAGGAGGGGGTGAGAAGCT	17	-	43585577-43585626	17q21.31d	Homo sapiens leucine rich repeat containing 37, member A4 (pseudogene) (LRRC37A4), non-coding RNA. XM_934274 XM_941652 XM_945358 XM_945361 XM_945364				KIAA0563; FLJ10120	KIAA0563; FLJ10120
Homo sapiens	RefSeq	NR_002940.1	ILMN_45485	LRRC37A4	NR_002940.1	NR_002940.1		55073	89994735	NR_002940.1	LRRC37A4		ILMN_2393693	0001990041	A	2816	AGCAGCCCCGTGTGTATGCTGGTGCAGGTTCTAAGCAAAGTGAGCTGCCC	17	-	43584484-43584533	17q21.31d	Homo sapiens leucine rich repeat containing 37, member A4 (pseudogene) (LRRC37A4), non-coding RNA. XM_934274 XM_941652 XM_945358 XM_945361 XM_945364				KIAA0563; FLJ10120	KIAA0563; FLJ10120
Homo sapiens	RefSeq	NM_006962.1	ILMN_19118	ZNF182	NM_006962.1	NM_006962.1		7569	55769558	NM_006962.1	ZNF182	NP_008893.1	ILMN_1726617	0000360204	I	327	CTGCAAGCTGTACAAGAAGCATGACACCAGCATCTGCATCTGGTGAGGAC	X	-	47847965-47847995:47847996-47848014	Xp11.23e	Homo sapiens zinc finger protein 182 (ZNF182), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZNF21; KOX14; HHZ150; Zfp182; MGC131713; MGC125383; ZNF182	ZNF21; KOX14; HHZ150; Zfp182; MGC131713; MGC125383; ZNF182
Homo sapiens	Unigene	Hs.563862	ILMN_116634	HS.563862	Hs.563862		Hs.563862		23282299	BU616091			ILMN_1849859	0003870142	S	250	AATGTGGATACTCATGGGGCAGTGACCAACCTGACTGAAGGGTGGGTGCA	1	+	98898764-98898813		UI-H-DF0-bex-i-18-0-UI.s1 NCI_CGAP_DF0 Homo sapiens cDNA clone UI-H-DF0-bex-i-18-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_021966.1	ILMN_307742	TCL1A	NM_001098725.1	NM_001098725.1		8115	148922878	NM_001098725.1	TCL1A	NP_001092195.1	ILMN_1788841	0000070110	S	1028	CGTGCAGCTCAAGGAAAGGCCTGAAAGGAGCCCTTATCTGTGCTCAGGAC	14	-	96176617-96176666	14q32.13b	Homo sapiens T-cell leukemia/lymphoma 1A (TCL1A), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The nucleus of either the ovum or the spermatozoon following fertilization. Thus, in the fertilized ovum, there are two pronuclei, one originating from the ovum, the other from the spermatozoon that brought about fertilization; they approach each other, but do not fuse until just before the first cleavage, when each pronucleus loses its membrane to release its contents [goid 45120] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 7809072] [evidence TAS]		TCL1	TCL1
Homo sapiens	RefSeq	NM_024607.1	ILMN_9571	PPP1R3B	NM_024607.1	NM_024607.1		79660	13375814	NM_024607.1	PPP1R3B	NP_078883.1	ILMN_2131103	0003940682	S	3663	CTTTGCCTTAAGAAGTGCCCTCCCCACAATGCAGGAGAGGCACAGAGTGC	8	-	9033010-9033059	8p23.1d	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 3B (PPP1R3B), mRNA.		The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues in alpha(1->4) glycosidic linkage, joined together by alpha(1->6) glycosidic linkages [goid 5977] [evidence IEA]		GL; FLJ14005; PPP1R4	GL; FLJ14005; PPP1R4
Homo sapiens	RefSeq	NM_001007090.1	ILMN_172437	C8ORF48	XR_017961.1	XR_017961.1		157773	113420299	XR_017961.1	C8orf48		ILMN_1784408	0005860392	S	1310	TGGTAGTTTGGGCCAGGATGTTGATGGTACAGAAGCAAAGTAGTATGGGG				8p22e	PREDICTED: Homo sapiens chromosome 8 open reading frame 48 (C8orf48), misc RNA.					FLJ25402
Homo sapiens	RefSeq	NM_032859.2	ILMN_182273	ABHD13	NM_032859.2	NM_032859.2		84945	49355780	NM_032859.2	ABHD13	NP_116248.2	ILMN_2073969	0005870288	S	5146	CTCAAATTTGAATGTCATAGTACATTGTGTGCTAACCATGGCAAGCAAAC	13	+	107684448-107684497	13q33.3b	Homo sapiens abhydrolase domain containing 13 (ABHD13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ14906; C13orf6; RP11-153I24.2; bA153I24.2; MGC27058; BEM46L1	RP11-153I24.2; bA153I24.2; FLJ14906; C13orf6; MGC27058; BEM46L1
Homo sapiens	RefSeq	NM_032859.2	ILMN_182273	ABHD13	NM_032859.2	NM_032859.2		84945	49355780	NM_032859.2	ABHD13	NP_116248.2	ILMN_1785285	0004810600	S	3482	GATGGGTAAGAGGTGGAAAACAAACTTAGTATCAGGGGTCCATGAAGCCC	13	+	107682784-107682833	13q33.3b	Homo sapiens abhydrolase domain containing 13 (ABHD13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	FLJ14906; C13orf6; RP11-153I24.2; bA153I24.2; MGC27058; BEM46L1	RP11-153I24.2; bA153I24.2; ABHD13; FLJ14906; C13orf6; MGC27058; BEM46L1
Homo sapiens	RefSeq	XM_932912.1	ILMN_43816	LOC645458	XM_932912.1	XM_932912.1		645458	89030861	XM_932912.1	LOC645458	XP_938005.1	ILMN_1766875	0002100504	S	138	TCTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCAC	10	+	25981922-25981971		PREDICTED: Homo sapiens hypothetical protein LOC645458 (LOC645458), mRNA.					
Homo sapiens	RefSeq	NM_013432.3	ILMN_11110	NFKBIL2	NM_013432.3	NM_013432.3		4796	34304357	NM_013432.3	NFKBIL2	NP_038460.3	ILMN_1781383	0003060274	S	4121	ACCCTGGCGCTGCCTTTCCCCACCCTCACCGAAGCCCCTAATAAATGAAG	8	-	145625284-145625333	8q24.3h	Homo sapiens nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 2 (NFKBIL2), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ40087; IKBR	FLJ40087; IKBR
Homo sapiens	RefSeq	NM_053286.1	ILMN_10931	AQP6	NM_053286.1	NM_053286.1		363	16950630	NM_053286.1	AQP6	NP_445738.1	ILMN_1666519	0003290168	I	3262	GAGAGCAAGGGGCAAGGTCCCCTTACCTTGTGGGCTTGGGAAACACGACT	12	+	48655322-48655371	12q13.13a	Homo sapiens aquaporin 6, kidney specific (AQP6), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8812490] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a cytoplasmic vesicle [goid 30659] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 8812490] [evidence TAS]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [pmid 8812490] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [pmid 8812490] [evidence TAS]	AQP2L	AQP2L
Homo sapiens	RefSeq	NM_004405.2	ILMN_8551	DLX2	NM_004405.3	NM_004405.3		1746	84043958	NM_004405.3	DLX2	NP_004396.1	ILMN_1692368	0003780553	S	1712	TTTCCTTCCTGCAGTTCCCAGCCCTCGGAGCCCCCATCCCTTATCTTACC	2	-	172964708-172964757	2q31.1d	Homo sapiens distal-less homeobox 2 (DLX2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 7590232] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 1354641] [evidence TAS]; Interacting selectively with single-stranded RNA [goid 3727] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	TES1; TES-1	TES1; TES-1
Homo sapiens	RefSeq	NM_015112.1	ILMN_13624	MAST2	NM_015112.2	NM_015112.2		23139	112363079	NM_015112.2	MAST2	NP_055927.2	ILMN_1690922	0005290008	S	5598	TCAGGAGGGGCCAAGAACCAGGGGGCCATCAAAAGCATCGGGATTTGGCA	1	+	46273783-46273832	1p34.1b-p34.1a	Homo sapiens microtubule associated serine/threonine kinase 2 (MAST2), mRNA.	The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins [goid 15630] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence ISS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-12 [goid 45075] [evidence ISS]; The process whereby a relatively unspecialized cell acquires the specialized features of a spermatid cell [goid 48515] [evidence ISS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence ISS]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12117771] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence ISS]; Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any phosphatase [goid 19902] [pmid 10646847] [evidence IPI]	FLJ39200; RP4-533D7.1; KIAA0807; MAST205; MTSSK	RP4-533D7.1; KIAA0807; MAST205; MTSSK
Homo sapiens	RefSeq	NM_182553.1	ILMN_19340	CNIH2	NM_182553.1	NM_182553.1		254263	32698937	NM_182553.1	CNIH2	NP_872359.1	ILMN_2349696	0003990164	A	883	TTCAGAGCCCTCCCCCTTGGACTAGAGCGGCTGGGCAGAGCTCTAAACAG	11	+	65807812-65807861	11q13.1e	Homo sapiens cornichon homolog 2 (Drosophila) (CNIH2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC50896; Cnil	MGC50896; Cnil
Homo sapiens	RefSeq	NM_182553.1	ILMN_19340	CNIH2	NM_182553.1	NM_182553.1		254263	32698937	NM_182553.1	CNIH2	NP_872359.1	ILMN_1762802	0004670202	I	264	TGCTCACCCTGGTGCTGTGCGCCTCCCTCATCTTCTTTGTCATCTGGCAC	11	+	65802535-65802584	11q13.1e	Homo sapiens cornichon homolog 2 (Drosophila) (CNIH2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC50896; Cnil	MGC50896; Cnil
Homo sapiens	RefSeq	XM_938838.1	ILMN_19340	CNIH2	NM_182553.1	NM_182553.1		254263	32698937	NM_182553.1	CNIH2	NP_872359.1	ILMN_1698733	0000670398	A	1183	AGGCTCTTTCTCCAGCCCTGTCTCCATCTGCCCCAACCTCAGCCCACCTT	11	+	65808112-65808161	11q13.1e	Homo sapiens cornichon homolog 2 (Drosophila) (CNIH2), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MGC50896; Cnil	
Homo sapiens	RefSeq	XM_001715722.1	ILMN_334443	LOC100131688	XM_001715722.1	XM_001715722.1		100131688	169210246	XM_001715722.1	LOC100131688	XP_001715774.1	ILMN_3274973	0005050142	M	801	CCTGCTCTCCTCCACTGTGGCTTCTTCTAATGGGACCAAGACGGTTGTGC				16p11.2a	PREDICTED: Homo sapiens similar to hCG2041551 (LOC100131688), mRNA.					
Homo sapiens	RefSeq	NM_001423.1	ILMN_163266	EMP1	NM_001423.1	NM_001423.1		2012	4503558	NM_001423.1	EMP1	NP_001414.1	ILMN_1801616	0003940435	S	2380	GAGGGCAAGCCACCAAATTACCTAGGCTGAGGTTAGAGAGATTGGCCAGC	12	+	13260606-13260655	12p13.1b	Homo sapiens epithelial membrane protein 1 (EMP1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8996089] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8884260] [evidence TAS]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8996089] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8996089] [evidence TAS]; The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species [goid 8544] [pmid 7499420] [evidence TAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence IEA]		CL-20; EMP-1; TMP	EMP-1; CL-20; TMP
Homo sapiens	RefSeq	NM_138712.3	ILMN_7980	PPARG	NM_138712.3	NM_138712.3		5468	116284369	NM_138712.3	PPARG	NP_619726.2	ILMN_2364384	0001440324	A	1549	GCTGCTCCAGAAAATGACAGACCTCAGACAGATTGTCACGGAACACGTGC	3	+	12422914-12422963	3p25.2a-p25.1d	Homo sapiens peroxisome proliferator-activated receptor gamma (PPARG), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin [goid 1890] [evidence ISS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 9568716] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9568716] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 10973253] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 10622252] [evidence IMP]; The directed movement of long-chain fatty acids into, out of, within or between cells. A long-chain fatty acid is an aliphatic compound with a terminal carboxyl group and with a chain length greater than C12 [goid 15909] [evidence ISS]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte [goid 30224] [pmid 9568716] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin stimulus. Insulin is a polypeptide hormone produced by the islets of Langerhans of the pancreas in mammals, and by the homologous organs of other organisms [goid 32869] [pmid 10622252] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipid stimulus [goid 33993] [pmid 9568715] [evidence ISS]; Any process involved in the maintenance of an internal equilibrium of glucose within an organism or cell [goid 42593] [pmid 10622252] [evidence IMP]; The directed movement of any conjugated, water-soluble protein in which the nonprotein moiety consists of a lipid or lipids, into, out of, within or between cells [goid 42953] [pmid 9568716] [evidence IDA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [pmid 17145956] [evidence TAS]; The commitment of cells to specific cell fates and their capacity to differentiate into particular kinds of cells. Positional information is established through protein signals that emanate from a localized source within a cell (the initial one-cell zygote) or within a developmental field [goid 45165] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of adipocyte differentiation [goid 45600] [evidence ISS]; The chemical reactions and pathways resulting in the formation of low-density lipoprotein receptors, cell surface proteins that mediate the endocytosis of low-density lipoprotein by cells [goid 45713] [pmid 9568716] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of transcription [goid 45941] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [pmid 9568716] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole [goid 50872] [pmid 12588810] [evidence TAS]; Any process involved in the maintenance of an internal equilibrium of lipid within an organism or cell [goid 55088] [pmid 9113987] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low density lipoprotein stimulus [goid 55098] [pmid 9568716] [evidence IDA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; A ligand-dependent receptor found in the nucleus of the cell [goid 4879] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Combining with a steroid hormone to initiate a change in cell activity [goid 3707] [evidence IEA]; Combining with a prostaglandin (PG) to initiate a change in cell activity [goid 4955] [pmid 9568715] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 9113987] [evidence IDA]; Interacting selectively with a drug, any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease [goid 8144] [pmid 10622252] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity required for initiation or upregulation of transcription [goid 16563] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with a transcription activator, any protein whose activity is required to initiate or upregulate transcription [goid 33613] [pmid 10622252] [evidence IDA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a retinoid X receptor [goid 46965] [pmid 9568715] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9744270] [evidence TAS]; Interacting selectively with arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer [goid 50544] [pmid 9568715] [evidence ISS]	NR1C3; PPARG1; PPARG2	NR1C3; PPARG1; PPARG2; HUMPPARG
Homo sapiens	RefSeq	NM_005267.3	ILMN_18434	GJA8	NM_005267.3	NM_005267.3		2703	55953075	NM_005267.3	GJA8	NP_005258.2	ILMN_1686867	0002760328	S	1102	GGAGAGAAGAAGGAGGAAGCAGAGAGGCTGACCACGGAGGAGCAGGAGAA	1	+	145847745-145847794	1q21.1d	Homo sapiens gap junction protein, alpha 8, 50kDa (GJA8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7796604] [evidence TAS]; An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction [goid 5922] [pmid 9497259] [evidence TAS]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7796604] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9497259] [evidence TAS]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]	Catalysis of energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules [goid 15267] [pmid 7796604] [evidence TAS]	CX50; MP70; CZP1; CAE1; CAE	CAE; CX50; MP70; CZP1; CAE1
Homo sapiens	RefSeq	NR_029622.1	ILMN_388699	MIR205	NR_029622.1	NR_029622.1		406988	262206281	NR_029622.1	MIR205		ILMN_3308295	0002000477	S	23	GCTTCTCTTGTCCTTCATTCCACCGGAGTCTGTCTCATACCCAACCAGAT				1q32.2b	Homo sapiens microRNA 205 (MIR205), microRNA.					
Homo sapiens	RefSeq	NM_018249.4	ILMN_9876	CDK5RAP2	NM_018249.4	NM_018249.4		55755	58535450	NM_018249.4	CDK5RAP2	NP_060719.4	ILMN_1725235	0007570348	I	5072	CAGGAAGGAGCCCTCACTCTGGCTGTCCAAGCCGTGTCCATCCCTGAGGT	9	-	123169312-123169361	9q33.2a	Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 1, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10721722] [evidence NAS]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10915792] [evidence NAS]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [pmid 10721722] [evidence NAS]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 14654843] [evidence IDA]; Interacting selectively with neuronal Cdc2-like kinase, an enzyme involved in the regulation of neuronal differentiation and neuro-cytoskeleton dynamics [goid 42808] [pmid 10721722] [evidence IPI]	MCPH3; DKFZp686D1070; Cep215; KIAA1633; C48; DKFZp686B1070	MCPH3; DKFZp686D1070; Cep215; KIAA1633; C48; DKFZp686B1070
Homo sapiens	RefSeq	NM_001011649.1	ILMN_9876	CDK5RAP2	NM_018249.4	NM_018249.4		55755	58535450	NM_018249.4	CDK5RAP2	NP_060719.4	ILMN_1655990	0005690228	A	6117	AGTTGAGGCTGTGCGCCTTGGTGGGCTTCACGTCTTCCCCTGGATTTGCT	9	-	123151210-123151259	9q33.2a	Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 1, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10721722] [evidence NAS]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10915792] [evidence NAS]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [pmid 10721722] [evidence NAS]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 14654843] [evidence IDA]; Interacting selectively with neuronal Cdc2-like kinase, an enzyme involved in the regulation of neuronal differentiation and neuro-cytoskeleton dynamics [goid 42808] [pmid 10721722] [evidence IPI]	MCPH3; DKFZp686D1070; Cep215; KIAA1633; C48; DKFZp686B1070	MCPH3; DKFZp686D1070; Cep215; KIAA1633; C48; DKFZp686B1070
Homo sapiens	RefSeq	NM_181609.2	ILMN_16423	KRTAP19-3	NM_181609.3	NM_181609.3		337970	133507126	NM_181609.3	KRTAP19-3	NP_853640.1	ILMN_1763883	0004490450	S	285	GGACTTTCCCAGAGCTGACTTCAATCATTGGACAACAAAGATCATGCTGG	21	-	31863941-31863990	21q22.11a	Homo sapiens keratin associated protein 19-3 (KRTAP19-3), mRNA.	A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]			GTRHP; KAP19.3	GTRHP; KAP19.3
Homo sapiens	RefSeq	NM_178820.3	ILMN_14974	FBXO27	NM_178820.3	NM_178820.3		126433	34222267	NM_178820.3	FBXO27	NP_849142.1	ILMN_1721360	0003370039	S	1344	GGGACTTCCTTGGTCCCTTCAGGGAAGCCCTCAACTCATCTCTGAACTTA	19	-	44207431-44207480	19q13.2a	Homo sapiens F-box protein 27 (FBXO27), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	FBG5; Fbx27	FBG5; Fbx27
Homo sapiens	RefSeq	NM_001457.1	ILMN_21371	FLNB	NM_001457.1	NM_001457.1		2317	4503746	NM_001457.1	FLNB	NP_001448.1	ILMN_1664922	0005220767	S	9084	GAGGTGTAGGGAATTTTGCCTGCCTTCCTGCAGACCTGAGCTGGCTTTGG	3	+	58132673-58132722	3p14.3a	Homo sapiens filamin B, beta (actin binding protein 278) (FLNB), mRNA.	Bundle of microfilaments and other proteins found in fibroblasts [goid 1725] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Small region on the surface of a cell that anchors the cell to the extracellular matrix and that are points of termination of actin filaments [goid 5925] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 9651345] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8327473] [evidence NAS]	Process by which cytoskeletal filaments are directly or indirectly linked to the plasma membrane [goid 7016] [pmid 9694715] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8327473] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The developmental sequence of events leading to the formation of adult muscle that occurs in the anima. In vertebrate skeletal muscle the main events are: the fusion of myoblasts to form myotubes that increase in size by further fusion to them of myoblasts, the formation of myofibrils within their cytoplasm and the establishment of functional neuromuscular junctions with motor neurons. At this stage they can be regarded as mature muscle fibers [goid 7519] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 8327473] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [pmid 8327473] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10676904] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16076904] [evidence IPI]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	FLN1L; filamin B; FH1; DKFZp686A1668; AOI; ABP-278; SCT; TAP; TABP	FLN1L; filamin B; FH1; DKFZp686A1668; AOI; ABP-278; SCT; TAP; TABP
Homo sapiens	RefSeq	NM_024938.2	ILMN_10704	PCNXL2	NM_014801.3	NM_014801.3		80003	134254442	NM_014801.3	PCNXL2	NP_055616.3	ILMN_1751793	0003290674	A	3891	CCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGG	1	-	233270890-233270936:233275460-233275462	1q42.2b-q42.2c	Homo sapiens pecanex-like 2 (Drosophila) (PCNXL2), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			KIAA0435; FLJ11383	KIAA0435; FLJ11383
Homo sapiens	RefSeq	NM_002573.2	ILMN_16697	PAFAH1B3	NM_002573.2	NM_002573.2		5050	20149519	NM_002573.2	PAFAH1B3	NP_002564.1	ILMN_1748093	0001510521	S	940	GCTGGAGCCCGCACCCTAAGCATCCTGCTGCCTTCCCACAACATTAAACT	19	-	47493038-47493069:47493070-47493087	19q13.2c	Homo sapiens platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit 29kDa (PAFAH1B3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 7669037] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: 2-acetyl-1-alkyl-sn-glycero-3-phosphocholine + H2O = 1-alkyl-sn-glycero-3-phosphocholine + acetate [goid 3847] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Catalysis of the hydrolysis of any ester bond [goid 16788] [evidence IEA]		
Homo sapiens	RefSeq	NM_006613.3	ILMN_5687	GRAP	NM_006613.3	NM_006613.3		10750	50659102	NM_006613.3	GRAP	NP_006604.1	ILMN_2353023	0001190370	A	627	TCAGCTTCCGCCGTGGCGACATCATTGAGGTCCTGGAGCGCCCAGACCCC	17	-	18925346-18925395	17p11.2e	Homo sapiens GRB2-related adaptor protein (GRAP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8647802] [evidence TAS]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8647802] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8647802] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8647802] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC64880	MGC64880
Homo sapiens	RefSeq	NM_006613.3	ILMN_5687	GRAP	NM_006613.3	NM_006613.3		10750	50659102	NM_006613.3	GRAP	NP_006604.1	ILMN_2353030	0006250079	A	628	CAGCTTCCGCCGTGGCGACATCATTGAGGTCCTGGAGCGCCCAGACCCCC	17	-	18925345-18925394	17p11.2e	Homo sapiens GRB2-related adaptor protein (GRAP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8647802] [evidence TAS]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8647802] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8647802] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8647802] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC64880	MGC64880
Homo sapiens	RefSeq	NM_006613.3	ILMN_5687	GRAP	NM_006613.3	NM_006613.3		10750	50659102	NM_006613.3	GRAP	NP_006604.1	ILMN_2264011	0005270544	I	1926	GCTGGCCCAAGACCCTTAGAACCCTGAGTGCTGGCAAATCTCACTGCTCC	17	-	18924047-18924096	17p11.2e	Homo sapiens GRB2-related adaptor protein (GRAP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8647802] [evidence TAS]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8647802] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8647802] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8647802] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC64880	MGC64880
Homo sapiens	RefSeq	NM_006613.3	ILMN_5687	GRAP	NM_006613.3	NM_006613.3		10750	50659102	NM_006613.3	GRAP	NP_006604.1	ILMN_2353027	0004730431	A	629	AGCTTCCGCCGTGGCGACATCATTGAGGTCCTGGAGCGCCCAGACCCCCA	17	-	18925344-18925393	17p11.2e	Homo sapiens GRB2-related adaptor protein (GRAP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8647802] [evidence TAS]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8647802] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8647802] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8647802] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC64880	MGC64880
Homo sapiens	RefSeq	NM_006613.3	ILMN_5687	GRAP	NM_006613.3	NM_006613.3		10750	50659102	NM_006613.3	GRAP	NP_006604.1	ILMN_1656472	0002260286	I	1	CGCACTCAAAACAAAGGAAGACCGTCCTCGACTGCAGAGGAAGCAGGAAG	17	-	18950286-18950335	17p11.2e	Homo sapiens GRB2-related adaptor protein (GRAP), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8647802] [evidence TAS]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8647802] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8647802] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8647802] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC64880	MGC64880
Homo sapiens	Unigene	Hs.544018	ILMN_107506	HS.544018	Hs.544018		Hs.544018		2278218	AA534202			ILMN_1911087	0005290445	S	521	AGGACTGCTTCAAATTTTCGAGCGTGGACCATGTGCCCTTCTTGGCCACG					nj21b04.s1 NCI_CGAP_AA1 Homo sapiens cDNA clone IMAGE:993103 3, mRNA sequence					
Homo sapiens	RefSeq	NM_024893.1	ILMN_18683	TMEM90B	NM_024893.1	NM_024893.1		79953	13376346	NM_024893.1	TMEM90B	NP_079169.1	ILMN_2206474	0001980326	S	2241	CTCCCAATCACCGCGCTGGCGGATGCTCACCCCGTCATAAGCAGAAACTA	20	+	24524090-24524139	20p11.21b-p11.21a	Homo sapiens transmembrane protein 90B (TMEM90B), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ14220	FLJ14220
Homo sapiens	RefSeq	XM_001721631.1	ILMN_333986	LOC100129677	XM_001721631.1	XM_001721631.1		100129677	169210791	XM_001721631.1	LOC100129677	XP_001721683.1	ILMN_3252033	0000270707	M	66	TAGTCCCAAAGCCAGGATCTTCGTGGGAGGGTTCCAGAGGGTGAGGCCCA	17	+	9989965-9990014	17p13.1b	PREDICTED: Homo sapiens hypothetical protein LOC100129677 (LOC100129677), mRNA.					
Homo sapiens	RefSeq	NR_004404.1	ILMN_349973	RNU105A	NR_004404.1	NR_004404.1		26768	161169043	NR_004404.1	RNU105A		ILMN_3240155	0004570110	S	102	CGTTGAAGATGAAGCTGGGCCTCGTGTCTGCGCCTGCATATTCCTACAGC	1	+	28835171-28835220		Homo sapiens RNA, U105A small nucleolar (RNU105A), small nucleolar RNA.				E1c; 105A	E1c; 105A
Homo sapiens	RefSeq	NM_199290.2	ILMN_6475	NACA2	NM_199290.2	NM_199290.2		342538	42476196	NM_199290.2	NACA2	NP_954984.1	ILMN_2158548	0005490121	S	350	ACTGGACGTCTACAAGAGCCCTGCTTCGGATGCCTACATAGTTTTTGGGG	17	-	57022946-57022995	17q23.2c	Homo sapiens nascent polypeptide-associated complex alpha subunit 2 (NACA2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		ANAC; MGC71999; NACAL; NACA2	ANAC; MGC71999; NACAL; NACA2
Homo sapiens	RefSeq	NM_144595.3	ILMN_10198	SLAIN1	NM_144595.3	NM_144595.3		122060	98986336	NM_144595.3	SLAIN1	NP_653196.1	ILMN_2397795	0006200220	A	992	CGACAGCCTCTTAAAGCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAG	13	+	77233026-77233075	13q22.3b	Homo sapiens SLAIN motif family, member 1 (SLAIN1), transcript variant 2, mRNA.				C13orf32; MGC131899; FLJ30046	
Homo sapiens	RefSeq	NM_015937.2	ILMN_19969	PIGT	NM_015937.3	NM_015937.3		51604	94538352	NM_015937.3	PIGT	NP_057021.2	ILMN_1738759	0003840689	S	1876	CTGCCACTTGCTCTCCTCAGAGTTGGCTTTTGAACCAAAGTGCCCTGGAC	20	+	43487946-43487995	20q13.12b	Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class T (PIGT), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor [goid 42765] [pmid 15713669] [evidence TAS]	A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [pmid 11483512] [evidence TAS]; A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain [goid 16255] [pmid 1846368] [evidence EXP]	Catalysis of the formation of the linkage between a protein and a glycosylphosphatidylinositol anchor. The reaction probably occurs by subjecting a peptide bond to nucleophilic attack by the amino group of ethanolamine-GPI, transferring the protein from a signal peptide to the GPI anchor [goid 3923] [pmid 11483512] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11483512] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15713669] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11483512] [evidence IPI]	MGC8909; NDAP; FLJ41596; CGI-06	MGC8909; CGI-06
Homo sapiens	RefSeq	NM_013960.1	ILMN_29179	NRG1	NM_013960.2	NM_013960.2		3084	116006961	NM_013960.2	NRG1	NP_039254.1	ILMN_1811954	0002760372	I	1791	CAAGGCACACAGATCCAAATGCATGCAGATCCAGCTATCAGCAACTCATC	8	+	32740308-32740357	8p12d	Homo sapiens neuregulin 1 (NRG1), transcript variant ndf43, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1348215] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8096067] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1350381] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11389077] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 12646923] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 12646923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9553078] [evidence IDA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [pmid 17432114] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 7514177] [evidence IDA]; Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [pmid 9553078] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 17432114] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11389077] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [pmid 17432114] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15073182] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [pmid 9553078] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [pmid 17432114] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 12646923] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 16412517] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 16412517] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 10559227] [evidence IDA]; The disaggregation of a protein complex into its constituent components, occurring at the level of an individual cell. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups [goid 43624] [pmid 15155732] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 7556068] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a substance from a cell or group of cells [goid 51048] [pmid 10559227] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [pmid 9553078] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [pmid 9553078] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [pmid 10372964] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 15073182] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 11389077] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8096067] [evidence NAS]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [pmid 7556068] [evidence IDA];  [goid 30297] [pmid 9553078] [evidence IC ];  [goid 30297] [pmid 1348215] [evidence NAS];  [goid 30297] [pmid 1350381] [evidence NAS]; Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [pmid 1348215] [evidence NAS]; Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [pmid 1350381] [evidence NAS]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 7556068] [evidence IDA]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 11389077] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 10372964] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	HRG; GGF2; HGL; GGF; NDF; HRGA; HRG1; SMDF; ARIA	HRG; GGF2; HGL; GGF; NDF; HRGA; HRG1; SMDF; ARIA
Homo sapiens	Unigene	Hs.213541	ILMN_82386	HS.213541	Hs.213541		Hs.213541		16552101	AK056642			ILMN_1826531	0002940452	S	3369	TCTTCCATACATTAGTTCCCACCATCGCATGCCCAGGGACCACTGCCTGG	12	+	73221258-73221307		Homo sapiens cDNA FLJ32080 fis, clone OCBBF2000015					
Homo sapiens	Unigene	Hs.556853	ILMN_112634	HS.556853	Hs.556853		Hs.556853		27319147	CA867598			ILMN_1910146	0005340360	S	9	CGGCCAAACATCCCTGGACTAGAAGTTGCAGGGGAAATCAAACAGCCCAG	X	+	131180214-131180263		ir30e06.y1 HR85 islet Homo sapiens cDNA clone IMAGE:6546731 5, mRNA sequence					
Homo sapiens	RefSeq	NM_178011.3	ILMN_171104	LRRTM3	NM_178011.3	NM_178011.3		347731	109809758	NM_178011.3	LRRTM3	NP_821079.3	ILMN_2053334	0003190240	S	5161	TCACCCAGCATGGTTACAATAACAGCCAGCAGCTGCAGCAAACCATAAAG	10	+	68530425-68530474	10q21.3c	Homo sapiens leucine rich repeat transmembrane neuronal 3 (LRRTM3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC131810	MGC131810
Homo sapiens	RefSeq	XM_001128351.2	ILMN_183012	LOC728288	XM_001128351.2	XM_001128351.2		728288	169208046	XM_001128351.2	LOC728288	XP_001128351.1	ILMN_3210578	0006370192	A	1125	GCGCTTTAATTGCATCAAAGGGTTCTTCTCAATGGGGTTTCAGAGGCGCG	15	+	36152242-36152291	15q14c	PREDICTED: Homo sapiens hypothetical LOC728288 (LOC728288), mRNA.					
Homo sapiens	RefSeq	XM_498817.2	ILMN_170288	LOC729003	XM_001133211.1	XM_001133211.1		729003	113411418	XM_001133211.1	LOC729003	XP_001133211.1	ILMN_1744216	0001430615	S	2890	GGCAACAGTTTTCCGTTTGTGCCTACTCCACCTGCTGTCTTTGTTGGGTC	1	-	147553335-147553384	1q21.1e	PREDICTED: Homo sapiens hypothetical protein LOC729003 (LOC729003), mRNA.					
Homo sapiens	RefSeq	XM_937702.1	ILMN_138002	LOC284379	XM_937702.1	XM_937702.1		284379	89057627	XM_937702.1	LOC284379	XP_942795.1	ILMN_1718076	0005420372	I	1	ATGGGCCGCTGGTTGGACAAGCTGGGACTCCATATCAGCCCTGCACCCGC				19q13.41b	PREDICTED: Homo sapiens similar to solute carrier family 7, member 3; amino acid transporter, cationic 3; solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 (LOC284379), mRNA.					
Homo sapiens	RefSeq	NM_016651.5	ILMN_173168	DACT1	NM_016651.5	NM_016651.5		51339	118498369	NM_016651.5	DACT1	NP_057735.2	ILMN_2250344	0005090437	I	822	AAAGAAGGCCACTGTGAAGACCAGGCCTCAGGGGCAGTTTGCCGTTCCCT	14	+	58181752-58181801	14q23.1b	Homo sapiens dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis) (DACT1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	THYEX3; DAPPER1; DPR1; HDPR1; FRODO; DAPPER	THYEX3; DAPPER1; DPR1; HDPR1; FRODO; DAPPER
Homo sapiens	RefSeq	NM_016651.5	ILMN_173168	DACT1	NM_016651.5	NM_016651.5		51339	118498369	NM_016651.5	DACT1	NP_057735.2	ILMN_2328094	0001510553	A	3231	GACTTGGAGGCCAAACCTTAAATCCAGAGATAGCAGCCTCGATAGGGACC	14	+	58184161-58184210	14q23.1b	Homo sapiens dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis) (DACT1), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	THYEX3; DAPPER1; DPR1; HDPR1; FRODO; DAPPER	THYEX3; DAPPER1; DPR1; HDPR1; FRODO; DAPPER
Homo sapiens	RefSeq	XM_001129441.2	ILMN_169876	LOC645166	XM_001129441.2	XM_001129441.2		645166	169161415	XM_001129441.2	LOC645166	XP_001129441.2	ILMN_3237991	0001090500	S	473	TGTGCCTGGATACCTGAGTCACCAGGTGGAGGAAACTCCCATTGACATGC	1	+	147218034-147218083	1q21.1e	PREDICTED: Homo sapiens similar to lymphocyte-specific protein 1 (LOC645166), mRNA.					
Homo sapiens	RefSeq	NM_178276.4	ILMN_29190	SERINC5	NM_178276.4	NM_178276.4		256987	148226533	NM_178276.4	SERINC5	NP_840060.1	ILMN_3307705	0004250170	S	1220	AGGACACTGAAGAGCAGCAGCCGGGGAAGGAGGGACCACGGGTCATTTAT	5	-	79498004-79498053	5q14.1d	Homo sapiens serine incorporator 5 (SERINC5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. They are important constituents of cell membranes [goid 6658] [evidence ISS]; The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester [goid 8654] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transferase activity, the catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from a donor compound to an acceptor [goid 51347] [evidence ISS]		C5orf12; TPO1	C5orf12; TPO1
Homo sapiens	RefSeq	NM_030961.1	ILMN_11812	TRIM56	NM_030961.1	NM_030961.1		81844	30794215	NM_030961.1	TRIM56	NP_112223.1	ILMN_1666376	0002510239	S	3115	GGGCCAAAGAGGTGTTAGGTTCAAAGGCTGCGAAGAGAATAGGCTACTGG	7	+	100520197-100520246	7q22.1d	Homo sapiens tripartite motif-containing 56 (TRIM56), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZP667O116; RNF109; FLJ35608	DKFZP667O116; RNF109; FLJ35608
Homo sapiens	RefSeq	XM_936333.1	ILMN_139054	FAM82B	XM_936333.1	XM_936333.1		51115	89028801	XM_936333.1	FAM82B	XP_941426.1	ILMN_1772973	0007510274	I	674	CCTTGACTGGTGAGTGGTTTTCTTTTTCCCCGTTAGGTGAGTGGCTGGTA				8q21.3a	PREDICTED: Homo sapiens family with sequence similarity 82, member B (FAM82B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]		
Homo sapiens	RefSeq	XM_929354.1	ILMN_164088	C19ORF57	NM_024323.3	NM_024323.3		79173	31543147	NM_024323.3	C19orf57	NP_077299.3	ILMN_1682339	0006110240	S	2036	ATGCTCCAGGGGGTCCTAGTGGACCCTACAAACCTCCCTTCAGTTGCCCG	19	-	13993502-13993551	19p13.12c	Homo sapiens chromosome 19 open reading frame 57 (C19orf57), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 8228263] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]	MGC11271; MGC149720	
Homo sapiens	RefSeq	NM_001701.2	ILMN_172728	BAAT	NM_001701.2	NM_001701.2		570	41349433	NM_001701.2	BAAT	NP_001692.1	ILMN_1771308	0001980491	S	2775	CATGAGGGATTCTGTATCCTGTCTCTCATCTACACTTGCTGGCCTTCCTG	9	-	103163173-103163222	9q31.1b	Homo sapiens bile acid Coenzyme A: amino acid N-acyltransferase (glycine N-choloyltransferase) (BAAT), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 2037576] [evidence TAS]; The material contained within the membrane of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase [goid 5782] [pmid 8034703] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8034703] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IEA]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [evidence IEA]; The chemical reactions and pathways involving glycine, aminoethanoic acid [goid 6544] [pmid 8034703] [evidence TAS]; The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group [goid 6637] [evidence IEA]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 2037576] [evidence TAS]; The chemical reactions and pathways involving bile acids, any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine [goid 8206] [pmid 8034703] [evidence TAS]	Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the transfer of an acyl group to a nitrogen atom on the acceptor molecule [goid 16410] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion [goid 4091] [evidence IEA]; Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate [goid 16290] [evidence IEA]; Catalysis of the transfer of an acyl group to a nitrogen atom on the acceptor molecule [goid 16410] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A [goid 16790] [evidence IEA]; Catalysis of the reaction: choloyl-CoA + glycine = CoA + glycocholate [goid 47963] [evidence IEA]	MGC104432; FLJ20300; BACAT; BAT	MGC104432; FLJ20300; BACAT; BAT
Homo sapiens	RefSeq	NR_003528.2	ILMN_308911	LOC653501	NR_003528.2	NR_003528.2		653501	156119623	NR_003528.2	LOC653501		ILMN_3242253	0005260687	S	277	GCCACCTCGTCTCAGTGGGATATTGCATTACTAAACCCAAGGTGATCTCC	9	-	39456572-39456604:39456880-39456896	9p13.1a	Homo sapiens zinc finger protein 658 pseudogene (LOC653501), non-coding RNA.				FLJ32813; DKFZp781K2153	FLJ32813; DKFZp781K2153
Homo sapiens	RefSeq	XM_001717865.1	ILMN_339719	LOC100131851	XM_001717865.1	XM_001717865.1		100131851	169170972	XM_001717865.1	LOC100131851	XP_001717917.1	ILMN_3204903	0001690292	A	26	TTTCTGATGGTTACCCTGTCCCCAGAGGCCCCTTTCCTGAGGGCACACCC	7	+	39808968-39809017	7p14.1d-p14.1c	PREDICTED: Homo sapiens hypothetical protein LOC100131851 (LOC100131851), mRNA.					
Homo sapiens	RefSeq	XM_001717071.1	ILMN_349558	LOC100134244	XM_001717071.1	XM_001717071.1		100134244	169214882	XM_001717071.1	LOC100134244	XP_001717123.1	ILMN_3247134	0003940377	S	1425	AGTGCCTCGTCACTGCAAACTGGCTGCTGTGGTTCCAGTCGTTGCTTCTG					PREDICTED: Homo sapiens similar to hCG1821260 (LOC100134244), mRNA.					
Homo sapiens	RefSeq	NM_002344.3	ILMN_13873	LTK	NM_002344.3	NM_002344.3		4058	46249417	NM_002344.3	LTK	NP_002335.2	ILMN_1799871	0001440386	I	1032	CGCTCACTGCAGGAGGGGGCGGAGGGCGGCCAGGGCTGCTCCGAGGCTTG	15	-	39590739-39590788	15q15.1c	Homo sapiens leukocyte tyrosine kinase (LTK), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 7685902] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 7685902] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7685902] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 7685902] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7685902] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 7685902] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TYK1	TYK1
Homo sapiens	RefSeq	NM_197939.1	ILMN_26875	RNF135	NM_197939.1	NM_197939.1		84282	37655168	NM_197939.1	RNF135	NP_922921.1	ILMN_2407529	0006980692	A	1694	GCAAGGTCAAGCTGAGGAGACTAAGTTAGCCATGTGGGCAGTGAAGCATG	17	+	26350757-26350806	17q11.2c	Homo sapiens ring finger protein 135 (RNF135), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC13061; L13	MGC13061; L13
Homo sapiens	RefSeq	NM_032322.3	ILMN_26875	RNF135	NM_197939.1	NM_197939.1		84282	37655168	NM_197939.1	RNF135	NP_922921.1	ILMN_1700660	0002630376	A	1722	GCCATGTGGGCAGTGAAGCATGCCAATGTGATCAATCCCTAGTAAAAGCC	17	+	26350785-26350834	17q11.2c	Homo sapiens ring finger protein 135 (RNF135), transcript variant 2, mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC13061; L13	MGC13061; L13
Homo sapiens	RefSeq	XM_001717337.1	ILMN_352471	LOC100133844	XM_001717337.1	XM_001717337.1		100133844	169164496	XM_001717337.1	LOC100133844	XP_001717389.1	ILMN_3249113	0007510437	S	582	TTTTGAGAAAGAGCCAGACACACCCTGGTGGAGGAACGGGGAGGGCTTGC					PREDICTED: Homo sapiens hypothetical LOC100133844 (LOC100133844), mRNA.					
Homo sapiens	RefSeq	NM_002722.2	ILMN_10027	PPY	NM_002722.3	NM_002722.3		5539	82659101	NM_002722.3	PPY	NP_002713.1	ILMN_1751445	0003140148	S	324	GGACTTATAATGCCACCTTCTGTCTCCTACGACTCCATGAGCAGCGCCAG	17	-	42018255-42018295:42018296-42018304	17q21.31b	Homo sapiens pancreatic polypeptide (PPY), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 6373251] [evidence TAS]; The regulated release of proteins from a cell or group of cells [goid 9306] [pmid 2997153] [evidence TAS]	Interacting selectively with a G-protein-coupled receptor [goid 1664] [evidence IEA]; The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 2997153] [evidence TAS]	PNP	PNP
Homo sapiens	RefSeq	XM_926544.1	ILMN_38240	LOC653225	XM_926544.1	XM_926544.1		653225	89040386	XM_926544.1	LOC653225	XP_931637.1	ILMN_1689315	0003290243	S	3	GGGTGCAACCCCAGTCCCAGCCCATGGTCAGGCCTCCTGGGCAGTGTCTA	16	-	47441462-47441511		PREDICTED: Homo sapiens similar to TFIIA-alpha and beta-like factor (General transcription factor II A, 1-like factor) (LOC653225), mRNA.					
Homo sapiens	RefSeq	NM_001033760.1	ILMN_682	COX18	NM_173827.2	NM_173827.2		285521	76253916	NM_173827.2	COX18	NP_776188.1	ILMN_1752006	0005890202	A	4301	GAGTTAAGTGTCTTTTGTATGCTCATGTGATGACTGGTGGCTGGGGGCCC	4	-	74139452-74139501	4q13.3d	Homo sapiens COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) (COX18), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the mitochondrial inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 31305] [pmid 16212937] [evidence IDA]	The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase), the terminal member of the respiratory chain of the mitochondrion and some aerobic bacteria. Cytochrome c oxidases are multi-subunit enzymes containing from 13 subunits in the mammalian mitochondrial form to 3-4 subunits in the bacterial forms [goid 8535] [pmid 16911509] [evidence IGI]; The process by which a protein is incorporated into a mitochondrial membrane [goid 51204] [pmid 16911509] [evidence IGI]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 16911509] [evidence IGI]	COX18HS; FLJ38991; MGC126733; COX18	COX18HS; MGC126733; COX18
Homo sapiens	RefSeq	NM_173827.2	ILMN_682	COX18	NM_173827.2	NM_173827.2		285521	76253916	NM_173827.2	COX18	NP_776188.1	ILMN_1676311	0004670707	I	1668	GTTAGAGCTACCAGAACTTTGGAGAATAGGGTTAGCTACTGAATGATGGC	4	-	74142085-74142134	4q13.3d	Homo sapiens COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) (COX18), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the mitochondrial inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 31305] [pmid 16212937] [evidence IDA]	The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase), the terminal member of the respiratory chain of the mitochondrion and some aerobic bacteria. Cytochrome c oxidases are multi-subunit enzymes containing from 13 subunits in the mammalian mitochondrial form to 3-4 subunits in the bacterial forms [goid 8535] [pmid 16911509] [evidence IGI]; The process by which a protein is incorporated into a mitochondrial membrane [goid 51204] [pmid 16911509] [evidence IGI]	Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [pmid 16911509] [evidence IGI]	COX18HS; FLJ38991; MGC126733; COX18	COX18HS; FLJ38991; MGC126733; COX18
Homo sapiens	RefSeq	NM_000034.2	ILMN_20463	ALDOA	NM_000034.2	NM_000034.2		226	34577108	NM_000034.2	ALDOA	NP_000025.1	ILMN_1681374	0002470341	I	755	CACACGTCAACGATTCTATTTGAAGTTGGGCAGGGGGGTGGCGCTGCTCA	16	+	29982921-29982970	16p11.2d	Homo sapiens aldolase A, fructose-bisphosphate (ALDOA), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey [goid 6000] [pmid 2825199] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [pmid 2825199] [evidence TAS]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [pmid 8598869] [evidence TAS]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the reaction: D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate [goid 4332] [pmid 2825199] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]; Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring [goid 16829] [evidence IEA]	MGC17716; ALDA; MGC10942; MGC17767	MGC17716; ALDA; MGC10942; MGC17767
Homo sapiens	RefSeq	NM_001031731.1	ILMN_10933	YIF1B	NM_001031731.1	NM_001031731.1		90522	72534755	NM_001031731.1	YIF1B	NP_001026901.1	ILMN_1773687	0003440097	A	379	TTCCCCTACCTACACCAGGACTGGGAAGTGCAGTACCAACAGGACACCCC	19	-	43491505-43491537:43491704-43491720	19q13.2a	Homo sapiens Yip1 interacting factor homolog B (S. cerevisiae) (YIF1B), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FinGER8	FinGER8
Homo sapiens	RefSeq	NM_173539.1	ILMN_183669	ZNF596	NM_173539.2	NM_173539.2		169270	109240539	NM_173539.2	ZNF596	NP_775810.2	ILMN_1725679	0002370520	S	2161	CCACAGGCAAGCAACCATATGTCTGTAATTGCTGTGCACTCTCATTCAGC	8	+	186504-186553	8p23.3b	Homo sapiens zinc finger protein 596 (ZNF596), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ36123	FLJ36123
Homo sapiens	RefSeq	NM_003748.2	ILMN_30363	ALDH4A1	NM_003748.2	NM_003748.2		8659	25777733	NM_003748.2	ALDH4A1	NP_003739.2	ILMN_1696099	0002640273	I	2700	TAGAATCCTCCTCTGCCTGGGAGTGGCTCTGTGTGGACCAGTCCCTCACT	1	-	19070923-19070972	1p36.13b	Homo sapiens aldehyde dehydrogenase 4 family, member A1 (ALDH4A1), nuclear gene encoding mitochondrial protein, transcript variant P5CDhL, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [pmid 8621661] [evidence TAS]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6562] [pmid 8621661] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: 1-pyrroline-5-carboxylate + NAD+ + H2O = L-glutamate + NADH + H+ [goid 3842] [pmid 8621661] [evidence TAS]; Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [pmid 8621661] [evidence TAS]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [pmid 8621661] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	P5CDh; P5CD; ALDH4; P5CDhL; P5CDhS	P5CDh; P5CD; ALDH4; P5CDhL; P5CDhS
Homo sapiens	RefSeq	XR_041613.1	ILMN_352682	LOC284749	XR_041613.1	XR_041613.1		284749	169214567	XR_041613.1	LOC284749		ILMN_3296219	0001190543	M	266	CTCAGCTGATCAACGCCTTGATAGCCAGGAAAGGCCTGTCCTACCCCAAA	20	+	46431105-46431154	20q13.13b	PREDICTED: Homo sapiens misc_RNA (LOC284749), miscRNA.					
Homo sapiens	RefSeq	XM_001714105.1	ILMN_335138	LOC100132424	XM_001714105.1	XM_001714105.1		100132424	169206117	XM_001714105.1	LOC100132424	XP_001714157.1	ILMN_3275724	0004390097	M	636	CCCGCCTAGTCTGCGCTGGGTACTGTTGTTATTCGTGACTGTCCCCTCTC				13q14.11d	PREDICTED: Homo sapiens hypothetical protein LOC100132424 (LOC100132424), mRNA.					
Homo sapiens	RefSeq	XM_943246.1	ILMN_137647	FLJ20581	XM_943246.1	XM_943246.1		54988	89040705	XM_943246.1	FLJ20581	XP_948339.1	ILMN_1805147	0004250139	I	849	TCCACACATAGAGAGCGAATCAGAGAGGAGCACTCCCATTGGCAGCCAGG				16p12.3a	PREDICTED: Homo sapiens hypothetical protein FLJ20581, transcript variant 3 (FLJ20581), mRNA.					
Homo sapiens	RefSeq	NM_018034.2	ILMN_22433	WDR70	NM_018034.2	NM_018034.2		55100	20149650	NM_018034.2	WDR70	NP_060504.1	ILMN_2131392	0005960451	S	1861	TCCTCGGGAAGCCATTTTGCGTCATGCCAAAGCAGCAGAAGACAGCCCAT	5	+	37516680-37516692:37552373-37552409	5p13.2b-p13.2a	Homo sapiens WD repeat domain 70 (WDR70), mRNA.				FLJ10233	FLJ10233
Homo sapiens	RefSeq	XM_042066.10	ILMN_309540	MAP3K1	NM_005921.1	NM_005921.1		4214	153945764	NM_005921.1	MAP3K1	NP_005912.1	ILMN_1723020	0004230373	S	7255	TGCTGTGTGACTATGATTCCTAAGATTTCCAGGGCTTAAGGGCTAACTTC	5	+	56190588-56190637	5q11.2f	Homo sapiens mitogen-activated protein kinase kinase kinase 1 (MAP3K1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [pmid 9808624] [evidence ND ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10465784] [evidence EXP]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9808624] [evidence NAS]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [evidence IEA]; A series of reactions initiated by the activation of the transcription factor NF-kappaB. NF-kappaB is sequestered by the inhibitor I-kappaB, and is released when I-kappaB is phosphorylated by activated I-kappaB kinase [goid 7249] [pmid 15276183] [evidence EXP]; The initiation of the activity of the inactive enzyme JUN kinase by phosphorylation by a JUN kinase kinase (JNKK) [goid 7257] [evidence IEA]; The morphological and physiological alterations undergone by mitochondria during apoptosis [goid 8637] [evidence IEA]; Any process that modulates the frequency, rate or extent of cell migration [goid 30334] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [evidence IEA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the phosphorylation and activation of MAP kinase kinases; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases [goid 4709] [pmid 9808624] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16286467] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11784851] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16636664] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9808624] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the phosphorylation of tyrosine and threonine residues in a c-Jun NH2-terminal kinase (JNK), a member of a subgroup of mitogen-activated protein kinases (MAPKs), which signal in response to cytokines and exposure to environmental stress. JUN kinase kinase (JNKK) is a dual-specificity protein kinase kinase and requires activation by a serine/threonine kinase JUN kinase kinase kinase [goid 8545] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MAPKKK1; MEKK1; MEKK	
Homo sapiens	RefSeq	XM_001723189.1	ILMN_346134	LOC100130561	XM_001723189.1	XM_001723189.1		100130561	169215760	XM_001723189.1	LOC100130561	XP_001723241.1	ILMN_3265797	0002120377	M	52	CCGGACGGGCACTGGGCGACTGTGCCTCGCTGAGGAAAAATAACTAAACA				22q12.1a	PREDICTED: Homo sapiens similar to high-mobility group (nonhistone chromosomal) protein 1-like 10, transcript variant 2 (LOC100130561), mRNA.					
Homo sapiens	RefSeq	NM_001008234.1	ILMN_162676	LOC400657	NM_001008234.1	NM_001008234.1		400657	56606138	NM_001008234.1	LOC400657	NP_001008235.1	ILMN_1725528	0002120280	S	2009	TAACGACATTGCTGGATGCTACACTCCATGTCTCTTTGTGGGACCCAGGC	18	-	70411394-70411443	18q22.3d	Homo sapiens hypothetical gene supported by BC036588 (LOC400657), mRNA.				FLJ10991	FLJ10991
Homo sapiens	RefSeq	NM_015140.2	ILMN_11837	TTLL12	NM_015140.2	NM_015140.2		23170	57617038	NM_015140.2	TTLL12	NP_055955.1	ILMN_1663113	0001430053	S	3174	CTGTGTTGTCTGGGCCCTTGTTTACAAGCACGCGTTACCCTTCCTGAGGG	22	-	43562757-43562806	22q13.2c	Homo sapiens tubulin tyrosine ligase-like family, member 12 (TTLL12), mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]	Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate [goid 4835] [evidence IEA]	FLJ41795; KIAA0153; dJ526I14.2	FLJ41795; KIAA0153; dJ526I14.2
Homo sapiens	RefSeq	NM_005078.1	ILMN_13295	TLE3	NM_005078.1	NM_005078.1		7090	4827029	NM_005078.1	TLE3	NP_005069.1	ILMN_2234412	0006840047	S	2192	TCAACGCCTGGAGGACGCCTTATGGAGCCAGCATATCCCAGTCTAAAGAA	15	-	68129588-68129597:68130784-68130823	15q23b	Homo sapiens transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) (TLE3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 1303260] [evidence TAS]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8808280] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [pmid 8808280] [evidence TAS]; The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state [goid 16055] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17220478] [evidence IPI]	ESG3; FLJ39460; ESG; KIAA1547; HsT18976; GRG3	ESG3; FLJ39460; ESG; KIAA1547; HsT18976; GRG3
Homo sapiens	RefSeq	NM_000278.2	ILMN_16345	PAX2	NM_000278.2	NM_000278.2		5076	34878700	NM_000278.2	PAX2	NP_000269.2	ILMN_2353490	0006450767	A	3097	GGCTGCTGCTTTGTGGAAAGACGGTGTGTGTCGTGTGAAGGCGAAACCCG	10	+	102578592-102578641	10q24.31a	Homo sapiens paired box gene 2 (PAX2), transcript variant b, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow [goid 5815] [pmid 18000879] [evidence IDA]; A small (70-100 nm) cytoplasmic granule that contains a number of centrosomal proteins; cetriolar satellites traffic toward microtubule minus ends and are enriched near the centrosome [goid 34451] [pmid 18000879] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [evidence IEA]; The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure [goid 1657] [evidence IEA]; Process involved in cell fate commitment. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment [goid 1709] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [pmid 9106533] [evidence TAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 9106533] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whose specific outcome is the progression of the camera-type eye over time, from its formation to the mature structure. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field [goid 43010] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 9106533] [evidence TAS]		
Homo sapiens	RefSeq	NM_153333.2	ILMN_12551	TCEAL8	NM_153333.2	NM_153333.2		90843	55925650	NM_153333.2	TCEAL8	NP_699164.1	ILMN_1670561	0007380138	I	135	CGCGACACAAATCGAGGTGAGGGAAGAGAGAGGAAAATCCCCTGAATCCC	X	-	102509537-102509586	Xq22.1e	Homo sapiens transcription elongation factor A (SII)-like 8 (TCEAL8), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Functions in chain elongation during polypeptide synthesis at the ribosome [goid 3746] [evidence IEA]	MGC45400	MGC45400
Homo sapiens	RefSeq	NM_007000.2	ILMN_177095	UPK1A	NM_007000.2	NM_007000.2		11045	21264372	NM_007000.2	UPK1A	NP_008931.1	ILMN_1655637	0002190408	S	1145	GAGTTCTGTCACGGTCACTTTACTGTCCCCATCATCACCCAGCACGGGGC	19	+	36169289-36169338	19q13.12a	Homo sapiens uroplakin 1A (UPK1A), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence ISS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15088894] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence ISS]	The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [pmid 10514386] [evidence IDA]; The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers; protein oligomers may be composed of different or identical monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer [goid 51259] [evidence ISS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence ISS]; Interacting selectively with any monosaccharide. Monosaccharides are the simplest carbohydrates; they are polyhydroxy aldehydes H[CH(OH)]nC(=O)H or polyhydroxy ketones H[CHOH]nC(=O)[CHOH]mH with three or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides [goid 48029] [evidence ISS]	MGC129752; UPIA; UPKA; UP1A; MGC129751; MGC14388; TSPAN21	UP1A; MGC129751; MGC129752; UPIA; UPKA; MGC14388; TSPAN21
Homo sapiens	RefSeq	XR_000984.1	ILMN_42132	LOC649125	XM_938207.2	XM_938207.2		649125	113428546	XM_938207.2	LOC649125	XP_943300.1	ILMN_1664215	0001500543	S	392	ATTACTCACAGAACCTCTTATGAACCCAACCAAAAACAGAGAGAAGATGG					PREDICTED: Homo sapiens similar to actin-related protein 2 (LOC649125), mRNA.					
Homo sapiens	RefSeq	NM_152660.1	ILMN_9454	FAM76A	NM_152660.1	NM_152660.1		199870	22749340	NM_152660.1	FAM76A	NP_689873.1	ILMN_2133713	0007040524	S	1809	CAATGCATAAGTATGGAGCTAAGTGCCTTTTGGAGGATTTCTTGGAAGAG	1	+	27960462-27960511	1p35.3b	Homo sapiens family with sequence similarity 76, member A (FAM76A), mRNA.				RP3-426I6.1; MGC34648	RP3-426I6.1; MGC34648
Homo sapiens	RefSeq	NM_030943.1	ILMN_28146	AMN	NM_030943.1	NM_030943.1		81693	13569914	NM_030943.1	AMN	NP_112205.1	ILMN_1683901	0001110706	S	1526	TCAGTAAAGGTGTTTCCTGCACCTGCTGTCAGCCTGGCTATGCCGCCACC	14	+	102466912-102466961	14q32.32a	Homo sapiens amnionless homolog (mouse) (AMN), mRNA.	A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue [goid 45177] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds [goid 7588] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]		PRO1028	PRO1028
Homo sapiens	RefSeq	NM_171830.1	ILMN_26980	KCNMB3	NM_171830.1	NM_171830.1		27094	25952104	NM_171830.1	KCNMB3	NP_741981.1	ILMN_1747629	0001050333	I	849	CAGTCCCCATGGATTGGAAATGTTCCCCCTTCTTTATGAGCTCACTGCAG	3	-	180451441-180451472:180451473-180451490	3q26.32c	Homo sapiens potassium large conductance calcium-activated channel, subfamily M beta member 3 (KCNMB3), transcript variant 3, mRNA.	A protein complex that forms a transmembrane channel through which potassium ions may cross a cell membrane in response to changes in membrane potential [goid 8076] [pmid 10692449] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]	The series of events in which a calcium ion stimulus is received by a cell and converted into a molecular signal [goid 5513] [pmid 10692449] [evidence IDA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence NAS]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 10692449] [evidence IDA]; The process that modulates the membrane potential involved in the propagation of a signal in a neuron [goid 19228] [pmid 10692449] [evidence IDA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10692449] [evidence IDA]; Catalysis of the calcium concentration-regulatable energy-independent passage of potassium ions across a lipid bilayer down a concentration gradient [goid 15269] [pmid 10692449] [evidence IDA];  [goid 15459] [pmid 10792058] [evidence NAS];  [goid 15459] [pmid 10766764] [evidence NAS]	KCNMB2; KCNMBL	KCNMB2; KCNMBL
Homo sapiens	RefSeq	XM_001716323.1	ILMN_339049	LOC100128283	XM_001716323.1	XM_001716323.1		100128283	169210890	XM_001716323.1	LOC100128283	XP_001716375.1	ILMN_3231433	0006450519	I	829	CCTGAGAGGCGGGCCGCAGCGGGAAGCAGCGGGCCCGAGGCCGCGTCCAT	17	+	16886592-16886641	17p11.2h	PREDICTED: Homo sapiens similar to hCG1775427 (LOC100128283), mRNA.					
Homo sapiens	RefSeq	XM_001716323.1	ILMN_339049	LOC100128283	XM_001716323.1	XM_001716323.1		100128283	169210890	XM_001716323.1	LOC100128283	XP_001716375.1	ILMN_3181284	0004610181	A	625	GCTGACAATGAGCTGCATTCTTCAGAGAGGCTGCCCCAGTCCCCCCAGCT	17	+	16872257-16872306	17p11.2h	PREDICTED: Homo sapiens similar to hCG1775427 (LOC100128283), mRNA.					
Homo sapiens	RefSeq	XM_001718703.1	ILMN_350644	LOC100132816	XM_001718703.1	XM_001718703.1		100132816	169208137	XM_001718703.1	LOC100132816	XP_001718755.1	ILMN_3247877	0003060431	S	132	GGTGCGAAACAAAGGACACGGGAAACCAAGAGAAAAGTCCATAGCAGATG	15	+	28587330-28587379	15q13.2b	PREDICTED: Homo sapiens hypothetical protein LOC100132816 (LOC100132816), mRNA.					
Homo sapiens	RefSeq	NM_001700.3	ILMN_19400	AZU1	NM_001700.3	NM_001700.3		566	28416954	NM_001700.3	AZU1	NP_001691.1	ILMN_1730867	0005670739	S	527	AACGTGACTGTGACCCCCGAGGACCAGTGTCGCCCCAACAACGTGTGCAC	19	+	781858-781907	19p13.3i	Homo sapiens azurocidin 1 (AZU1), mRNA.	Primary lysosomal granule found in neutrophil granulocytes. Contains a wide range of hydrolytic enzymes and is released into the extracellular fluid [goid 42582] [evidence ISS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 11861296] [evidence NAS]; Primary lysosomal granule found in neutrophil granulocytes. Contains a wide range of hydrolytic enzymes and is released into the extracellular fluid [goid 42582] [pmid 11861296] [evidence IDA]	The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 1774] [evidence ISS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The orderly movement of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system [goid 8347] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45348] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-1 beta [goid 50725] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fractalkine, a chemokine involved in the control of the key regulatory mechanisms of cell trafficking at sites of inflammation [goid 50754] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [evidence ISS]; The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 1774] [pmid 12465046] [evidence IEP]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10510329] [evidence NAS]; The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 12678126] [evidence NAS]; The initiation of the activity of the inactive enzyme protein kinase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7205] [pmid 12465046] [evidence TAS]; The orderly movement of glial cells, non-neuronal cells that provide support and nutrition, maintain homeostasis, form myelin, and participate in signal transmission in the nervous system [goid 8347] [pmid 12465046] [evidence IDA]; The change in morphology and behavior of a monocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor [goid 42117] [pmid 12465046] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of tumor necrosis factor, an inflammatory cytokine produced by macrophages/monocytes during acute inflammation and which is responsible for a diverse range of signaling events within cells, leading to necrosis or apoptosis [goid 42535] [pmid 12465046] [evidence IDA]; Any process that modulates the extent to which blood vessels can be pervaded by fluid [goid 43114] [pmid 11861296] [evidence NAS]; The migration of leukocytes from the blood vessels into the surrounding tissue [goid 45123] [pmid 11861296] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II [goid 45348] [pmid 12465046] [evidence IEP]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 12826073] [evidence IDA]; The movement of a macrophage in response to an external stimulus [goid 48246] [pmid 1919011] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of interleukin-1 beta [goid 50725] [pmid 12465046] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fractalkine, a chemokine involved in the control of the key regulatory mechanisms of cell trafficking at sites of inflammation [goid 50754] [pmid 12465046] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of phagocytosis [goid 50766] [pmid 12465046] [evidence IDA]; Reactions triggered in response to the presence of a Gram-negative bacterium that act to protect the cell or organism [goid 50829] [pmid 12465046] [evidence TAS]; Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical [goid 50930] [pmid 12465046] [evidence NAS]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [pmid 11994286] [evidence NAS]; Interacting selectively with a toxin, a poisonous substance that causes damage to biological systems. Toxins are differentiated from simple chemical poisons and vegetable alkaloids by their high molecular weight and antigenicity (they elicit an antibody response) [goid 15643] [pmid 10534120] [evidence NAS]	HBP; CAP37; NAZC; HUMAZUR; AZU; AZAMP	HBP; CAP37; NAZC; HUMAZUR; AZU; AZAMP
Homo sapiens	RefSeq	NM_194430.1	ILMN_182182	RNASE4	NM_194430.1	NM_194430.1		6038	37577169	NM_194430.1	RNASE4	NP_919411.1	ILMN_2408572	0005910382	A	775	CCTGCGGCAACACGTGCACCCTGAGGAGACAGGTGGCAGTGATCGCTACT	14	+	20237478-20237527	14q11.2b	Homo sapiens ribonuclease, RNase A family, 4 (RNASE4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 7742370] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [pmid 7742370] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RNS4; MGC9306	RNS4; MGC9306
Homo sapiens	RefSeq	NM_194430.1	ILMN_182182	RNASE4	NM_194430.1	NM_194430.1		6038	37577169	NM_194430.1	RNASE4	NP_919411.1	ILMN_2294976	0000020324	I	555	GTTGGAAGAGATGGTGATGGGCCTGGGCGTTTTGTTGTTGGTCTTCGTGC	14	+	20231554-20231603	14q11.2b	Homo sapiens ribonuclease, RNase A family, 4 (RNASE4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 7742370] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [pmid 7742370] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RNS4; MGC9306	RNS4; MGC9306
Homo sapiens	RefSeq	NM_194430.1	ILMN_182182	RNASE4	NM_194430.1	NM_194430.1		6038	37577169	NM_194430.1	RNASE4	NP_919411.1	ILMN_2294978	0007040333	I	557	TGGAAGAGATGGTGATGGGCCTGGGCGTTTTGTTGTTGGTCTTCGTGCTG	14	+	20231556-20231605	14q11.2b	Homo sapiens ribonuclease, RNase A family, 4 (RNASE4), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process by which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner [goid 6379] [pmid 7742370] [evidence NAS]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates [goid 4522] [pmid 7742370] [evidence NAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RNS4; MGC9306	RNS4; MGC9306
Homo sapiens	RefSeq	NM_001734.2	ILMN_29321	C1S	NM_001734.2	NM_001734.2		716	41393600	NM_001734.2	C1S	NP_001725.1	ILMN_1781626	0007400707	A	2285	ACCCCCCGTGAGGACTAATCCAGATACATCCCACCAGCCTCTCCAAGGGT	12	+	7048199-7048216:7048217-7048248	12p13.31d	Homo sapiens complement component 1, s subcomponent (C1S), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 814163] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1249422] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process involved in the activation of any of the steps of the classical pathway of the complement cascade which allows for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes [goid 6958] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 9856483] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]		
Homo sapiens	RefSeq	NM_001007792.1	ILMN_12505	NTRK1	NM_001007792.1	NM_001007792.1		4914	56118209	NM_001007792.1	NTRK1	NP_001007793.1	ILMN_1770307	0000730296	I	23	CAGCCTGAGCTTCCAGAGGGCCTAGGAGCAGTAAGGGAGTGAGTGGGCAA	1	+	155052188-155052237	1q23.1a	Homo sapiens neurotrophic tyrosine kinase, receptor, type 1 (NTRK1), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 9182757] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 16284401] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 7806500] [evidence EXP]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [pmid 10629055] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16284401] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11157096] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9290260] [evidence TAS]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 9290260] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 16939974] [evidence EXP]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 16805430] [evidence EXP]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 11520933] [evidence EXP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of a mechanoreceptor, a cell specialized to transduce mechanical stimuli and relay that information centrally in the nervous system [goid 42490] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate, to initiate a change in cell activity [goid 4714] [pmid 8957089] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with neurotrophin, any of a family of growth factors that block apoptosis in neurons and thus promote nerve growth [goid 43121] [pmid 9290260] [evidence TAS]	MTC; TRK; TRK1; TRKA; p140-TrkA; DKFZp781I14186	MTC; TRK; TRK1; TRKA; p140-TrkA; DKFZp781I14186
Homo sapiens	RefSeq	NM_001001323.1	ILMN_168704	ATP2B1	NM_001001323.1	NM_001001323.1		490	48255946	NM_001001323.1	ATP2B1	NP_001001323.1	ILMN_2401933	0004230564	A	6782	CGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGATG	12	-	89981927-89981976	12q21.33b	Homo sapiens ATPase, Ca++ transporting, plasma membrane 1 (ATP2B1), transcript variant 1, mRNA.				PMCA1kb; PMCA1	PMCA1; PMCA1kb
Homo sapiens	RefSeq	XM_928333.1	ILMN_37555	LOC645289	XM_928333.1	XM_928333.1		645289	89058851	XM_928333.1	LOC645289	XP_933426.1	ILMN_1811193	0002750487	S	296	AGGCCACCTACTCCCTGCTGCACCTGACGGAGCTCGCCGACTTCCAGTAC	22	-	19355038-19355071:19355162-19355177		PREDICTED: Homo sapiens similar to CG33096-PA, isoform A (LOC645289), mRNA.					
Homo sapiens	RefSeq	NM_017721.2	ILMN_177852	CC2D1A	NM_017721.3	NM_017721.3		54862	96974984	NM_017721.3	CC2D1A	NP_060191.3	ILMN_1701127	0007650746	S	3368	GGCCCCTGCAAGCACTTTACTTCCTGTTCCTCCCCAGCCTTAACCCCAAA	19	+	13902517-13902566	19p13.12c	Homo sapiens coiled-coil and C2 domain containing 1A (CC2D1A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IMP]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 12761501] [evidence IMP]	FLJ41160; FREUD-1; MRT3; FLJ20241	FREUD-1; FLJ20241
Homo sapiens	RefSeq	NM_153754.1	ILMN_5012	C21ORF88	NM_153754.1	NM_153754.1		114041	24371255	NM_153754.1	C21orf88	NP_715635.1	ILMN_1716682	0003310110	S	680	GCCATATTCACAGGTGTCAGGAATCAGAGGGCAGGTATATTGGGGGACCA	21	-	39891285-39891334	21q22.2b	Homo sapiens chromosome 21 open reading frame 88 (C21orf88), mRNA.					
Homo sapiens	Unigene	Hs.99253	ILMN_74604	HS.99253	Hs.99253		Hs.99253		27825979	BX089493			ILMN_1834803	0004730128	S	536	TACTCAATGATGAGCCTCTCCCACCCTCTGCTCCTAACTGGCCATGGGGC	9	+	13493116-13493165		BX089493 Soares_total_fetus_Nb2HF8_9w Homo sapiens cDNA clone IMAGp998P111937 ; IMAGE:786298, mRNA sequence					
Homo sapiens	RefSeq	NM_172139.2	ILMN_4533	IL28B	NM_172139.2	NM_172139.2		282617	28144900	NM_172139.2	IL28B	NP_742151.2	ILMN_1768900	0001980546	S	456	TCCACCATTGGCTGCACCGGCTCCAGGAGGCCCCAAAAAAGGAGTCCCCT	19	-	44426201-44426210:44426304-44426343	19q13.2a	Homo sapiens interleukin 28B (interferon, lambda 3) (IL28B), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]	IFNL3; IL-28B; IL28C	IFNL3; IL-28B; IL28C
Homo sapiens	RefSeq	NM_003761.2	ILMN_26790	VAMP8	NM_003761.2	NM_003761.2		8673	14043025	NM_003761.2	VAMP8	NP_003752.2	ILMN_2190084	0005910128	S	561	TGGCTGCATTTCTTGGGTCCTTAGAGTGGGCTGGAGAGACCTAGAGGGCC	2	+	85662555-85662604	2p11.2f	Homo sapiens vesicle-associated membrane protein 8 (endobrevin) (VAMP8), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 9614193] [evidence TAS]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [pmid 9614193] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	VAMP5; EDB	VAMP5; EDB
Homo sapiens	Unigene	Hs.565678	ILMN_118123	HS.565678	Hs.565678		Hs.565678		19721006	BM996105			ILMN_1856270	0004040064	S	515	AGAGCAGGGAGGACCAGGAGTGGGTAGACACCCAACATTCGTATGCACAG	20	+	24662889-24662938		UI-H-DT1-awi-j-18-0-UI.s1 NCI_CGAP_DT1 Homo sapiens cDNA clone IMAGE:5889905 3, mRNA sequence					
Homo sapiens	Unigene	Hs.539083	ILMN_104307	HS.539083	Hs.539083		Hs.539083		2337720	AA566081			ILMN_1896496	0004640494	S	386	GAACAGGGTGCTAATGGAGACAAGGGAGACCAGGAGACAGCTCAGCCAGG	11	+	2181563-2181612		nk21d03.s1 NCI_CGAP_Co11 Homo sapiens cDNA clone IMAGE:1014149 3, mRNA sequence					
Homo sapiens	RefSeq	NM_181093.1	ILMN_8041	SCYL3	NM_181093.1	NM_181093.1		57147	41281932	NM_181093.1	SCYL3	NP_851607.1	ILMN_1683674	0004220338	I	1458	CTGGCAGCACGCCCATCAACAGCAAGAAGCACATACAGCGAGATTACTAC	1	-	168091579-168091628	1q24.2c	Homo sapiens SCY1-like 3 (S. cerevisiae) (SCYL3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12651155] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 12651155] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 12651155] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 12651155] [evidence NAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12651155] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	PACE1; RP1-97P20.2; PACE-1	PACE1; RP1-97P20.2; PACE-1
Homo sapiens	RefSeq	XM_001714845.1	ILMN_337210	LOC100134712	XM_001714845.1	XM_001714845.1		100134712	169170501	XM_001714845.1	LOC100134712	XP_001714897.1	ILMN_3237608	0000110373	S	125	CCCAATGGGGCCAAAGGGTGCACACCACCGATCCAGGCGGGCTGGACCCT	7	-	71749962-71749995:71750383-71750398		PREDICTED: Homo sapiens hypothetical protein LOC100134712 (LOC100134712), mRNA.					
Homo sapiens	RefSeq	NM_033029.1	ILMN_6191	LMLN	NM_033029.2	NM_033029.2		89782	110556637	NM_033029.2	LMLN	NP_149018.2	ILMN_1815716	0004540047	S	1916	GTGGTCACCCTCTGGCTTCTGCTAGGCAATCTGTTTCCTCTGCTGGCTGG	3	+	199249861-199249910	3q29i	Homo sapiens leishmanolysin-like (metallopeptidase M8 family) (LMLN), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Msp; Gp63	Msp; Gp63
Homo sapiens	RefSeq	NM_201523.1	ILMN_9463	KLC4	NM_201523.1	NM_201523.1		89953	41871959	NM_201523.1	KLC4	NP_958931.1	ILMN_1687873	0004760497	I	221	GACCTCCCATTCTTTCCTGCATCATCGGGCATTGTGGAGGCACCCTACGG	6	+	43027849-43027898	6p21.1d	Homo sapiens kinesin light chain 4 (KLC4), transcript variant 3, mRNA.	Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any complex that includes a dimer of molecules from the kinesin superfamily, a group of related proteins that contain an extended region of predicted alpha-helical coiled coil in the main chain that likely produces dimerization. The native complexes of several kinesin family members have also been shown to contain additional peptides, often designated light chains as all of the noncatalytic subunits that are currently known are smaller than the chain that contains the motor unit. Kinesin complexes generally possess a force-generating enzymatic activity, or motor, which converts the free energy of the gamma phosphate bond of ATP into mechanical work [goid 5871] [evidence IEA]		Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	KNSL8; bA387M24.3; MGC111777	KNSL8; bA387M24.3; MGC111777
Homo sapiens	RefSeq	NM_005574.2	ILMN_172933	LMO2	NM_005574.2	NM_005574.2		4005	6633806	NM_005574.2	LMO2	NP_005565.1	ILMN_1800078	0003850059	S	2013	AGGCCTTAAGCTTTGGACCCAAGGGAAAACTGCATGGAGACGCATTTCGG	11	-	33836929-33836978	11p13c	Homo sapiens LIM domain only 2 (rhombotin-like 1) (LMO2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 1923511] [evidence TAS]; The process by which a myeloid precursor cell acquires specializes features of an erythrocyte [goid 30218] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TTG2; RBTN2; RBTNL1; RHOM2	TTG2; RBTN2; RBTNL1; RHOM2
Homo sapiens	RefSeq	XM_292035.5	ILMN_173265	ACSM4	NM_001080454.1	NM_001080454.1		341392	122937306	NM_001080454.1	ACSM4	NP_001073923.1	ILMN_1791923	0006980181	A	1483	CCAGCAGTTGTTGAATCGGCTGTTGTCAGTAGTCCAGATCAAATCCGCGG	12	+	7368408-7368457	12p13.31c	Homo sapiens acyl-CoA synthetase medium-chain family member 4 (ACSM4), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [evidence IEA]; The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis [goid 6631] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA [goid 47760] [evidence IEA]		
Homo sapiens	RefSeq	XM_940962.1	ILMN_37572	LOC124512	XM_940962.2	XM_940962.2		124512	113427596	XM_940962.2	LOC124512	XP_946055.2	ILMN_1764323	0006580504	A	860	CTGATGAGCAACCTGGCACACAAACTATGAGCAGACCACTTCAGCTTGAG				17q25.2a	PREDICTED: Homo sapiens hypothetical protein LOC124512 (LOC124512), mRNA.					
Homo sapiens	RefSeq	NM_007270.2	ILMN_27143	FKBP9	NM_007270.2	NM_007270.2		11328	33469984	NM_007270.2	FKBP9	NP_009201.2	ILMN_2145143	0005290086	S	2874	GTTGGGATTACAGGCGTGACTCACCATGCCCAGCCACTTAGTTTTTTCTT	7	+	33012515-33012564	7p14.3c	Homo sapiens FK506 binding protein 9, 63 kDa (FKBP9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence ISS]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MGC138258; FKBP63; PPIase; DKFZp586B1723; MGC126772; FKBP60	MGC138258; FKBP63; PPIase; DKFZp586B1723; MGC126772; FKBP60
Homo sapiens	RefSeq	XM_926684.1	ILMN_27143	FKBP9	NM_007270.2	NM_007270.2		11328	33469984	NM_007270.2	FKBP9	NP_009201.2	ILMN_1666121	0004260114	S	513	CCCCCCAATTCAGTGCTTCATTTTGATGTACTTCTGATGGATATTTGGAA	7	+	32981330-32981379	7p14.3c	Homo sapiens FK506 binding protein 9, 63 kDa (FKBP9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence ISS]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence ISS]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	MGC138258; FKBP63; PPIase; DKFZp586B1723; MGC126772; FKBP60	
Homo sapiens	RefSeq	NM_001001921.1	ILMN_164285	OR5AS1	NM_001001921.1	NM_001001921.1		219447	50054476	NM_001001921.1	OR5AS1	NP_001001921.1	ILMN_1698894	0004730561	S	543	CCCACCTCTTCTGGCTTTATCATGTACAGACACTCAGATCAACCAGCTTC	11	+	55555013-55555062	11q11c	Homo sapiens olfactory receptor, family 5, subfamily AS, member 1 (OR5AS1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-168	OR11-168
Homo sapiens	RefSeq	NM_001935.3	ILMN_166089	DPP4	NM_001935.3	NM_001935.3		1803	47078262	NM_001935.3	DPP4	NP_001926.2	ILMN_1692535	0004830255	S	3620	CCTAGTGAAAGAGGCAGCTTGAAACTGAGATGTGAACACATCAGCTTGCC	2	-	162848985-162849034	2q24.2d	Homo sapiens dipeptidyl-peptidase 4 (DPP4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16670267] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 11772392] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 7594462] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates [goid 46581] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level [goid 1666] [pmid 16670267] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; Any process that modulates the frequency, rate, or extent of cell-cell adhesion mediated by integrin [goid 33632] [pmid 11772392] [evidence IDA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific [goid 42110] [pmid 7594462] [evidence IDA]	Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain [goid 4177] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14684150] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 7594462] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain [goid 8239] [pmid 14684150] [evidence IDA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 14684150] [evidence IPI]	CD26; DPPIV; ADCP2; ADABP; TP103	CD26; DPPIV; ADABP; ADCP2; TP103
Homo sapiens	RefSeq	XM_926147.1	ILMN_39672	LOC642698	XM_926147.1	XM_926147.1		642698	88973809	XM_926147.1	LOC642698	XP_931240.1	ILMN_1676840	0006960068	S	181	GAGTGGGAAAACCTAACTTGAGGCCAGACTACATTTAAAGCAATTTGAGG	4	-	37544871-37544920		PREDICTED: Homo sapiens hypothetical protein LOC642698 (LOC642698), mRNA.					
Homo sapiens	RefSeq	XM_001720739.1	ILMN_340207	LOC100134304	XM_001720739.1	XM_001720739.1		100134304	169217794	XM_001720739.1	LOC100134304	XP_001720791.1	ILMN_3239785	0000870209	S	224	TGTGTGTGCTGCTGTGTTGTGAACTCCGTGGTTTGAACATGAAAGAAGTG					PREDICTED: Homo sapiens similar to hCG1983233 (LOC100134304), mRNA.					
Homo sapiens	RefSeq	NM_006399.2	ILMN_3307	BATF	NM_006399.2	NM_006399.2		10538	18375640	NM_006399.2	BATF	NP_006390.1	ILMN_1668822	0006220195	S	816	GGACCCCACCACTGTGGGTTGCAGGCCCAATGCAGAAGAGTATTAAGAAA	14	+	75082963-75083012	14q24.3b	Homo sapiens basic leucine zipper transcription factor, ATF-like (BATF), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8630063] [evidence TAS]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 8570175] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	B-ATF; BATF1; SFA-2	B-ATF; BATF1; SFA-2
Homo sapiens	RefSeq	XM_945397.1	ILMN_30996	LOC649270	XM_945397.1	XM_945397.1		649270	89042785	XM_945397.1	LOC649270	XP_950490.1	ILMN_1667000	0006520500	I	130	GGAATATAGTGGAAGGGACATGTGAGTGTTTTAGATTAGTAGAATGACAA					PREDICTED: Homo sapiens similar to aminopeptidase puromycin sensitive, transcript variant 12 (LOC649270), mRNA.					
Homo sapiens	RefSeq	XR_038368.1	ILMN_341290	LOC100130178	XR_038368.1	XR_038368.1		100130178	169166832	XR_038368.1	LOC100130178		ILMN_3231979	0002190398	I	713	TGATGCTATTGGGGCCCTGCAGGAAATGGCAGGAGTTACATATGTTTGGG				4q31.21b	PREDICTED: Homo sapiens misc_RNA (LOC100130178), miscRNA.					
Homo sapiens	RefSeq	NM_004574.2	ILMN_20103	SEPT4	NM_004574.2	NM_004574.2		5414	17986250	NM_004574.2	SEPT4	NP_004565.1	ILMN_2294123	0006180215	I	108	AGGGAGTCTGAAGCGTGGGACATGGACCGTTCACTGGGATGGCAAGGGAA	17	-	56606506-56606535:56606536-56606555	17q22d	Homo sapiens septin 4 (SEPT4), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A cellular process resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth, replication, and segregation of cellular components [goid 910] [pmid 9889007] [evidence TAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9889007] [evidence TAS]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 9889007] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]	hCDCREL-2; H5; hucep-7; MART; ARTS; PNUTL2; CE5B3	hCDCREL-2; H5; hucep-7; MART; ARTS; PNUTL2; CE5B3
Homo sapiens	Unigene	Hs.551138	ILMN_110503	HS.551138	Hs.551138		Hs.551138		21750667	AK092145			ILMN_1833212	0004180484	S	2111	GATCAGGTAGAGGGCAGGAAATGTAGAATGGCTTGAACAACTACCTCATG	9	-	97608379-97608428		Homo sapiens cDNA FLJ34826 fis, clone NT2NE2008803					
Homo sapiens	RefSeq	NM_000896.2	ILMN_20221	CYP4F3	NM_000896.2	NM_000896.2		4051	119220561	NM_000896.2	CYP4F3	NP_000887.2	ILMN_3251260	0000520523	S	2866	AGTAAGTCTCTGCCCTAGGCACATCAGATCACCTGGGGACCACTCCAGAG	19	+	15632448-15632497	19p13.12a	Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 3 (CYP4F3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [pmid 8486631] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [pmid 8486631] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate + NADPH + H2O = (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-trihydroxyicosa-6,8,10,14-tetraenoate + NADP+ + H2O [goid 50051] [evidence IEA]	CPF3; CYP4F; LTB4H	CPF3; LTB4H; CYP4F
Homo sapiens	RefSeq	NM_000896.2	ILMN_20221	CYP4F3	NM_000896.2	NM_000896.2		4051	119220561	NM_000896.2	CYP4F3	NP_000887.2	ILMN_2089484	0006840494	S	254	CAGCTCGGAGGAAGGTCTCCTATACACACAAAGCCTGGCATGCACCTTCG	19	+	15617534-15617583	19p13.12a	Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 3 (CYP4F3), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 6691] [pmid 8486631] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [pmid 8486631] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: (6Z,8E,10E,14Z)-(5S,12R)-5,12-dihydroxyicosa-6,8,10,14-tetraenoate + NADPH + H2O = (6Z,8E,10E,14Z)-(5S,12R)-5,12,20-trihydroxyicosa-6,8,10,14-tetraenoate + NADP+ + H2O [goid 50051] [evidence IEA]	CPF3; CYP4F; LTB4H	CPF3; LTB4H; CYP4F
Homo sapiens	RefSeq	XM_932064.1	ILMN_43960	LOC642780	XM_932064.1	XM_932064.1		642780	89040558	XM_932064.1	LOC642780	XP_937157.1	ILMN_1778128	0000940564	I	2034	CAGGCTGGCCACAAATTCCTGGGCTCAACTGATCCTCCCACCTCGTCCTT	16	+	88755810-88755859		PREDICTED: Homo sapiens similar to hypothetical protein LOC284701, transcript variant 1 (LOC642780), mRNA.					
Homo sapiens	RefSeq	XM_944924.1	ILMN_167668	LBH	XM_001132511.1	XM_001132511.1		81606	113413663	XM_001132511.1	LBH	XP_001132511.1	ILMN_1684834	0001740369	I	816	CTCAACAGTTCAAGTTCCCCCACCCCGAGGCTTGTGTACCCTTCTTGTGG				2p23.1b	PREDICTED: Homo sapiens hypothetical protein DKFZp566J091 (LBH), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]			
Homo sapiens	Unigene	Hs.570176	ILMN_122357	HS.570176	Hs.570176		Hs.570176		21753661	AK094576			ILMN_1831258	0004250440	S	1807	ACGCCTCCGCTTAACACTCCAGCCTCTCTTCTATTCGGTCAGGCCACAGC	2	-	9815162-9815211		Homo sapiens cDNA FLJ37257 fis, clone BRAMY2010171					
Homo sapiens	RefSeq	NM_007187.3	ILMN_665	WBP4	NM_007187.3	NM_007187.3		11193	21536424	NM_007187.3	WBP4	NP_009118.1	ILMN_1697906	0005700592	S	1943	CAGGAGTTCACATTCTAGCATATGCCTTTTTTCCCCCAGTCATGCACTCT	13	+	40555749-40555798	13q14.11b	Homo sapiens WW domain binding protein 4 (formin binding protein 21) (WBP4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy [goid 16607] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FBP21; MGC117310	FBP21; MGC117310
Homo sapiens	RefSeq	NM_016571.1	ILMN_29408	LGSN	NM_016571.1	NM_016571.1		51557	7705581	NM_016571.1	LGSN	NP_057655.1	ILMN_2143427	0006510403	S	1789	GCAAACTTACCAGATCTTGTCAGTCATTTCCTATGTGTATGTTGACCTGG	6	-	64047610-64047659	6q12a	Homo sapiens lengsin, lens protein with glutamine synthetase domain (LGSN), mRNA.				LGS; MGC163238; MGC163240	LGS; MGC163238; MGC163240
Homo sapiens	RefSeq	NM_016571.1	ILMN_29408	LGSN	NM_016571.1	NM_016571.1		51557	7705581	NM_016571.1	LGSN	NP_057655.1	ILMN_1742620	0007150451	S	1418	GCCCTTGTGGCACTGGAAGAAGATCAATGCCAGAGACAGGCTCTAGGAGA	6	-	64047981-64048030	6q12a	Homo sapiens lengsin, lens protein with glutamine synthetase domain (LGSN), mRNA.				LGS; MGC163238; MGC163240	LGS; MGC163238; MGC163240
Homo sapiens	RefSeq	NM_004438.3	ILMN_21869	EPHA4	NM_004438.3	NM_004438.3		2043	45439363	NM_004438.3	EPHA4	NP_004429.1	ILMN_1672022	0006650482	S	5669	CCGCTGCACCAAATCAAGTAGCTTCACCTTGTGTATGCAGGCCCCAAGTT	2	-	222283376-222283425	2q36.1a	Homo sapiens EPH receptor A4 (EPHA4), mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7898931] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 7898931] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an ephrin to initiate a change in cell activity [goid 5003] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	TYRO1; HEK8; SEK	TYRO1; HEK8; SEK
Homo sapiens	RefSeq	NM_152330.3	ILMN_25287	FRMD6	NM_152330.3	NM_152330.3		122786	109715867	NM_152330.3	FRMD6	NP_689543.1	ILMN_2330787	0005420070	A	3767	AGATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTC	14	+	51266134-51266183	14q22.1c	Homo sapiens FERM domain containing 6 (FRMD6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	EX1; c14_5320; MGC17921; C14orf31; Willin	c14_5320; MGC17921; C14orf31; Willin
Homo sapiens	RefSeq	NM_152330.3	ILMN_25287	FRMD6	NM_152330.3	NM_152330.3		122786	109715867	NM_152330.3	FRMD6	NP_689543.1	ILMN_2251759	0007650646	I	72	GCGCCGGTAGGAAGAGTCAGAGGGGTGACCAGAGAGCCCAACGCCTGGTG	14	+	51188397-51188446	14q22.1c	Homo sapiens FERM domain containing 6 (FRMD6), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]		The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	EX1; c14_5320; MGC17921; C14orf31; Willin	c14_5320; MGC17921; C14orf31; Willin
Homo sapiens	RefSeq	NM_001458.2	ILMN_167330	FLNC	NM_001458.3	NM_001458.3		2318	116805321	NM_001458.3	FLNC	NP_001449.3	ILMN_1715748	0000580491	S	9086	CAGCTGGGAGCTGCTTAGGTGGAAAACTCCAAATAAAGTGCGGCTGTCGC	7	+	128286512-128286561	7q32.1a	Homo sapiens filamin C, gamma (actin binding protein 280) (FLNC), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16076904] [evidence IPI]	FLN2; ABPL; ABPA; FLJ10186; ABP-280; ABP280A	FLN2; ABPL; ABPA; ABP-280; ABP280A
Homo sapiens	RefSeq	XM_938582.1	ILMN_39489	TMEM16J	XM_938582.1	XM_938582.1		338440	89034439	XM_938582.1	TMEM16J	XP_943675.1	ILMN_1748874	0001400040	I	847	CTAGATGGGAAACAGACCCGGAGTGTGGAACGTCTGGAACCAGGTGAGGC				11p15.5d	PREDICTED: Homo sapiens transmembrane protein 16J (TMEM16J), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_152695.3	ILMN_18127	ZNF449	NM_152695.4	NM_152695.4		203523	142371242	NM_152695.4	ZNF449	NP_689908.2	ILMN_1796927	0006200142	S	3814	CTTCCCTGAACAGTGGCAACAAGCATGGCAATTGACTCTGTCCTCATCCC	X	+	134324784-134324833	Xq26.3a	Homo sapiens zinc finger protein 449 (ZNF449), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZSCAN19; FLJ23614	FLJ23614; ZSCAN19
Homo sapiens	RefSeq	NM_144972.3	ILMN_3007	LDHAL6A	NM_144972.3	NM_144972.3		160287	47271496	NM_144972.3	LDHAL6A	NP_659409.2	ILMN_1758812	0004880253	S	2180	CAGGGGTGAGCCACTGTGCCTGGCCTTAGCTTTGATTTAGTATCCAGATG	11	+	18457377-18457426	11p15.1c	Homo sapiens lactate dehydrogenase A-like 6A (LDHAL6A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	 [goid 19642] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells [goid 44262] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+ [goid 4459] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	MGC23940	MGC23940
Homo sapiens	Unigene	Hs.541440	ILMN_105722	HS.541440	Hs.541440		Hs.541440		3043216	AA907756			ILMN_1876787	0000610730	S	181	GCCTGCGGGAAGTGGAGGAGCCGCACATGAAACTTTTTGCCTTGGGTCTC	2	-	239993541-239993590		om13h10.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:1540963 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001024939.1	ILMN_22594	SLC2A11	NM_001024939.1	NM_001024939.1		66035	68226417	NM_001024939.1	SLC2A11	NP_001020110.1	ILMN_1767717	0005960189	I	15	CTCCGCTCAGGCCCTCTTTCGAATGCTCCACGCCCTCCTGCGATCTAGAA	22	+	22530164-22530186:22530187-22530213	22q11.23a	Homo sapiens solute carrier family 2 (facilitated glucose transporter), member 11 (SLC2A11), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]; The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]; The process whereby a solute is transported from one side of a membrane to the other. This process includes the actual movement of the solute, and any regulation and preparatory steps, such as reduction of the solute [goid 55085] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of the hexose monosaccharide glucose from one side of the membrane to the other [goid 5355] [evidence IEA]; Catalysis of the transfer of a specific substance or group of related substances from one side of a membrane to the other [goid 22891] [evidence IEA]	GLUT10; SLC2A11-a; SLC2A11-c; MGC118833; MGC118830; GLUT11	GLUT10; SLC2A11-a; SLC2A11-c; MGC118833; MGC118830; GLUT11
Homo sapiens	RefSeq	NM_014787.2	ILMN_17435	DNAJC6	NM_014787.2	NM_014787.2		9829	55750030	NM_014787.2	DNAJC6	NP_055602.1	ILMN_1696079	0002690019	S	5180	GGGTACTTGTAGGAATACAATGAGGAGCTTGAATGCCACCTTCTGACATG	1	+	65653570-65653619	1p31.3b	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 6 (DNAJC6), mRNA.			Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate [goid 4725] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	KIAA0473; MGC129914; DJC6; MGC129915; MGC48436	KIAA0473; MGC129914; DJC6; MGC129915; MGC48436
Homo sapiens	RefSeq	NM_001001658.1	ILMN_165307	OR9A2	NM_001001658.1	NM_001001658.1		135924	48717233	NM_001001658.1	OR9A2	NP_001001658.1	ILMN_1703883	0002810041	S	884	AGGCCCTCCGAGATGGGATGAAACGCTGCTGTCAACTCCTGAAAGATTAG	7	-	142434341-142434341:142723287-142723335	7q34f	Homo sapiens olfactory receptor, family 9, subfamily A, member 2 (OR9A2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]		
Homo sapiens	RefSeq	NM_014162.1	ILMN_162564	HSPC072	XR_017985.1	XR_017985.1		29075	113428927	XR_017985.1	HSPC072		ILMN_1692646	0004760746	S	607	GGGCTCTCCACATCTTCCACCACGAAGTAAAAACAATTCTTGTGGGTGCC				20p11.23c	PREDICTED: Homo sapiens HSPC072 protein (HSPC072), misc RNA.					
Homo sapiens	RefSeq	NM_194248.1	ILMN_8176	OTOF	NM_194248.1	NM_194248.1		9381	34740330	NM_194248.1	OTOF	NP_919224.1	ILMN_1728705	0001070630	I	1993	CGACCGGAGAAACGGAGACAAGCCCATCACCTTTGAGGTCACCATAGGCA	2	-	26556022-26556025:26556575-26556620	2p23.3b	Homo sapiens otoferlin (OTOF), transcript variant 1, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10192385] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10192385] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 10192385] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 10192385] [evidence TAS]	The joining of two lipid bilayers to form a single membrane [goid 6944] [pmid 10192385] [evidence TAS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 10192385] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DFNB6; DFNB9; FER1L2; NSRD9	DFNB6; DFNB9; FER1L2; NSRD9
Homo sapiens	RefSeq	XM_930823.1	ILMN_46382	LOC642335	XM_930823.2	XM_930823.2		642335	113417380	XM_930823.2	LOC642335	XP_935916.1	ILMN_1678325	0006350156	S	2295	CTATTATATAGAAATATAATTGATTTTTGTTATTGACTCTGCTGCCTCCA	6	-	481288-481337	6p25.3b	PREDICTED: Homo sapiens hypothetical LOC642335 (LOC642335), mRNA.					
Homo sapiens	RefSeq	NM_152284.3	ILMN_183468	CHMP4C	NM_152284.3	NM_152284.3		92421	62526041	NM_152284.3	CHMP4C	NP_689497.1	ILMN_1711542	0002490554	S	1577	GGAATGGGGCAATGGATGCATTTCCCAAAACGTGTGAAAGCACTAACAGC	8	+	82671480-82671529	8q21.13c	Homo sapiens chromatin modifying protein 4C (CHMP4C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]		MGC22825; Shax3	MGC22825; Shax3
Homo sapiens	RefSeq	XM_001721792.1	ILMN_335019	LOC100133095	XM_001721792.1	XM_001721792.1		100133095	169162912	XM_001721792.1	LOC100133095	XP_001721844.1	ILMN_3235732	0000240521	S	72	TGGAGGTCCTGCAACATTGCACACGCTCGGAAGGCGGGAGGCGGCAAGGA	1	-	142625879-142625913:142725324-142725338	1q21.1a	PREDICTED: Homo sapiens hypothetical protein LOC100133095 (LOC100133095), mRNA.					
Homo sapiens	RefSeq	XM_932143.1	ILMN_31415	LOC202134	XM_932143.1	XM_932143.1		202134	88986258	XM_932143.1	LOC202134	XP_937236.1	ILMN_1736819	0007040669	I	4567	GCCAAAGGAATGGGCTCCAGACACCCCCTCTTCCAGAGCAAGGATGAAGG	5	+	175491500-175491549	5q35.2d	PREDICTED: Homo sapiens hypothetical protein LOC202134, transcript variant 7 (LOC202134), mRNA.					
Homo sapiens	RefSeq	NM_002466.2	ILMN_29093	MYBL2	NM_002466.2	NM_002466.2		4605	31652260	NM_002466.2	MYBL2	NP_002457.1	ILMN_1709020	0001850343	S	2339	CCCATTCTCATGTTTACAGGGGTTGTGGGGGCAGAGGGGGTCTGTGAATC	20	+	41778162-41778211	20q13.12a	Homo sapiens v-myb myeloblastosis viral oncogene homolog (avian)-like 2 (MYBL2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10770937] [evidence TAS]	B-MYB; MGC15600; BMYB	B-MYB; MGC15600; BMYB
Homo sapiens	RefSeq	NM_004991.2	ILMN_365809	MDS1	NM_004991.2	NM_004991.2		4197	195963413	NM_004991.2	MDS1	NP_004982.1	ILMN_3307897	0000380280	S	657	GCCTGGGGCAGGACTAGGAATATGGACCAAAAGGAAGATCGAAGTAGGTG				3q26.2b	Homo sapiens myelodysplasia syndrome 1 (MDS1), mRNA.			The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8643684] [evidence TAS]		
Homo sapiens	RefSeq	NM_198053.1	ILMN_27076	CD247	NM_000734.2	NM_000734.2		919	37595563	NM_000734.2	CD247	NP_000725.1	ILMN_1676924	0006290400	A	1502	AAACCCGTCAATGTACTAGGATACTGCTGCGTCATTACAGGGCACAGGCC	1	-	165666606-165666655	1q24.2a	Homo sapiens CD247 molecule (CD247), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11390434] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17652306] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11390434] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1390434] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11048639] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 15489916] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 11827988] [evidence EXP]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A protein complex that contains a disulfide-linked heterodimer of T cell receptor (TCR) chains, which are members of the immunoglobulin superfamily, and mediates antigen recognition, ultimately resulting in T cell activation. The TCR heterodimer is associated with the CD3 complex, which consists of the nonpolymorphic polypeptides gamma, delta, epsilon, zeta, and, in some cases, eta (an RNA splice variant of zeta) or Fc epsilon chains [goid 42101] [pmid 8176201] [evidence IDA]	Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 12110186] [evidence NAS]	CD3Q; CD3H; TCRZ; CD3Z; CD3-ZETA	CD3Q; CD3H; TCRZ; CD3Z; CD3-ZETA
Homo sapiens	RefSeq	NM_004681.2	ILMN_177339	EIF1AY	NM_004681.2	NM_004681.2		9086	33356162	NM_004681.2	EIF1AY	NP_004672.2	ILMN_2228976	0004390070	S	901	CTGCCTGATAATCATGCTGGGTTCTAATAAGCCCTACTTCCACCTAATCT	Y	+	21163939-21163988	Yq11.222c	Homo sapiens eukaryotic translation initiation factor 1A, Y-linked (EIF1AY), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12569173] [evidence IPI]		
Homo sapiens	RefSeq	NM_001079935.1	ILMN_175103	OR7E24	NM_001079935.1	NM_001079935.1		26648	121247394	NM_001079935.1	OR7E24	NP_001073404.1	ILMN_2231177	0001430025	S	831	CCTCAGTTCAGCTGTGTTACCATCCCCCAGGAAGAGTATGGTGGCTTCAG	19	+	9223550-9223599	19p13.2c	Homo sapiens olfactory receptor, family 7, subfamily E, member 24 (OR7E24), mRNA.				OR7E24P; OR19-8; OR7E24Q; HSHT2	OR7E24P; OR19-8; OR7E24Q; HSHT2
Homo sapiens	RefSeq	NR_002146.1	ILMN_175103	OR7E24	NM_001079935.1	NM_001079935.1		26648	121247394	NM_001079935.1	OR7E24	NP_001073404.1	ILMN_1669988	0003190451	S	952	GCCCTGTGCAGGCTGCATGGCAGAATCATCAAATCTCATCATCTCCATCC	19	+	9223671-9223720	19p13.2c	Homo sapiens olfactory receptor, family 7, subfamily E, member 24 (OR7E24), mRNA.				OR7E24P; OR19-8; OR7E24Q; HSHT2	OR7E24P; OR19-8; OR7E24Q; HSHT2
Homo sapiens	RefSeq	NM_019020.2	ILMN_17194	TBC1D16	NM_019020.2	NM_019020.2		125058	33563375	NM_019020.2	TBC1D16	NP_061893.2	ILMN_1758457	0004050056	S	3180	GCTGGGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCC	17	-	77913848-77913897	17q25.3d	Homo sapiens TBC1 domain family, member 16 (TBC1D16), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]; Any process that modulates the activity of a GTPase of the Rab family [goid 32313] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rab family [goid 5097] [evidence IEA]	FLJ20748; MGC25062	FLJ20748; MGC25062
Homo sapiens	RefSeq	NM_001032389.1	ILMN_15351	LOC389517	NM_001032389.1	NM_001032389.1		389517	74024920	NM_001032389.1	LOC389517	NP_001027561.1	ILMN_2066296	0005290195	S	2233	GAGAATTCAGTTGTGATTTTTAACATGTCTCAGATATATATAACAAAAAA				7q11.23a	Homo sapiens similar to Williams Beuren syndrome chromosome region 19 (LOC389517), mRNA.					
Homo sapiens	RefSeq	NM_001567.2	ILMN_20903	INPPL1	NM_001567.2	NM_001567.2		3636	4755141	NM_001567.2	INPPL1	NP_001558.2	ILMN_1728426	0002470367	S	4558	TGCTTAGTTCTCACTGTCTCCTGGTCTGTGCTGCCCTGCTCTGGGGATGC	11	+	71627622-71627671	11q13.4a	Homo sapiens inositol polyphosphate phosphatase-like 1 (INPPL1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid [goid 6796] [pmid 9367831] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol [goid 4437] [pmid 8530088] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]	SHIP2	SHIP2
Homo sapiens	RefSeq	XM_946030.1	ILMN_39756	LOC652806	XM_946030.2	XM_946030.2		652806	113430253	XM_946030.2	LOC652806	XP_951123.2	ILMN_1795349	0001090707	S	684	CGTGTCCTCACCATGGCGTAGCTGTCTCCACCCCGGTATCAGCTCCCGCA					PREDICTED: Homo sapiens hypothetical LOC652806 (LOC652806), mRNA.					
Homo sapiens	Unigene	Hs.19193	ILMN_71584	HS.19193	Hs.19193		Hs.19193		51471069	XM_378360			ILMN_1831106	0000360291	S	1307	CTTATCACACCAAGGCCACACCTGTTCTCTGGCCTCACAAACCAGTGAGG					PREDICTED: Homo sapiens hypothetical LOC400043 (LOC400043), mRNA					
Homo sapiens	RefSeq	NM_014827.3	ILMN_173086	ZC3H11A	NM_014827.4	NM_014827.4		9877	114842409	NM_014827.4	ZC3H11A	NP_055642.3	ILMN_1715574	0004850072	S	2210	CAGAGCAGTATTAGAACAGAAGCTAAAGAGGCTTCAGGTGAGACCACAGG	1	+	202084129-202084158:202085462-202085481	1q32.1e	Homo sapiens zinc finger CCCH-type containing 11A (ZC3H11A), mRNA.			Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	DKFZp686F14109; DKFZp686D03108; DKFZp781G2455; ZC3HDC11A; KIAA0663	DKFZp686F14109; DKFZp686D03108; DKFZp781G2455; ZC3HDC11A; KIAA0663
Homo sapiens	RefSeq	XM_001717094.1	ILMN_340317	LOC100134053	XM_001717094.1	XM_001717094.1		100134053	169171392	XM_001717094.1	LOC100134053	XP_001717146.1	ILMN_3239895	0004480750	S	3390	TGGGATGCCAAGGCGGGTGGATCATTGAGGTCAGAAGTTCAAGACCAGCC					PREDICTED: Homo sapiens similar to POLR2J4 protein (LOC100134053), mRNA.					
Homo sapiens	RefSeq	XM_942749.1	ILMN_35521	LOC642110	XM_942749.1	XM_942749.1		642110	88988737	XM_942749.1	LOC642110	XP_947842.1	ILMN_1654378	0004280070	S	1	CAAGGATGCGTATTAAGAAAATAACTAGAAGTGGCCGCATGATGTACCTC					PREDICTED: Homo sapiens hypothetical protein LOC642110 (LOC642110), mRNA.					
Homo sapiens	Unigene	Hs.534437	ILMN_102292	HS.534437	Hs.534437		Hs.534437		44887462	AY475219			ILMN_1821270	0004640561	S	366	GGCAAATTCCGGGTATGCACTCAACTTCGGCAAAGGCACCTCGCTGTTGG	14	+	22036487-22036536		Homo sapiens T cell antigen receptor alpha chain (TCRVA2) mRNA, complete cds					
Homo sapiens	RefSeq	NR_002574.1	ILMN_15384	SNORD102	NR_002574.1	NR_002574.1		26771	77735358	NR_002574.1	SNORD102		ILMN_3243909	0000770452	S	23	TTGATTGCTTGAAGCAATGTGAAAAACACATTTCACCGGCTCTGAAAGCT	13	+	26727223-26727272	13q12.2a	Homo sapiens small nucleolar RNA, C/D box 102 (SNORD102), small nucleolar RNA.				RNU102; Z18	RNU102; Z18
Homo sapiens	RefSeq	NM_016058.1	ILMN_16838	TPRKB	NM_016058.1	NM_016058.1		51002	7705589	NM_016058.1	TPRKB	NP_057142.1	ILMN_2118910	0005130482	S	272	GTGGCAGCAAACAAAGCAGTTCACCTCTACAAACTGGGAAAAATGAAGAC	2	-	73812847-73812896	2p13.2a	Homo sapiens TP53RK binding protein (TPRKB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12659830] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12659830] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 12659830] [evidence NAS]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 12659830] [evidence IPI]	CGI-121	CGI-121
Homo sapiens	RefSeq	NM_016058.1	ILMN_16838	TPRKB	NM_016058.1	NM_016058.1		51002	7705589	NM_016058.1	TPRKB	NP_057142.1	ILMN_1690307	0006510044	S	60	CCCGAGACGCACTGGGGGCCGGATGTAGAATCCTGCTTATCTGTGAAATG	2	-	73815202-73815204:73815205-73815226:73817937-73817961	2p13.2a	Homo sapiens TP53RK binding protein (TPRKB), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12659830] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12659830] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 12659830] [evidence NAS]	Interacting selectively with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate [goid 19901] [pmid 12659830] [evidence IPI]	CGI-121	CGI-121
Homo sapiens	RefSeq	NM_022743.1	ILMN_29453	SMYD3	NM_022743.1	NM_022743.1		64754	12232400	NM_022743.1	SMYD3	NP_073580.1	ILMN_1741954	0000540452	S	1205	GAAGAATGCGACGCCAACATCAGAGCATCCTAAGGGAACGCAGTCAGAGG	1	-	245912733-245912782	1q44c-q44d	Homo sapiens SET and MYND domain containing 3 (SMYD3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The alteration of DNA or protein in chromatin, which may result in changing the chromatin structure [goid 16568] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]; Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives [goid 18024] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	bA74P14.1; ZMYND1; ZNFN3A1; FLJ21080; MGC104324	bA74P14.1; ZMYND1; ZNFN3A1; FLJ21080; MGC104324
Homo sapiens	Unigene	Hs.570670	ILMN_122851	HS.570670	Hs.570670		Hs.570670		76555308	DV080195			ILMN_1845693	0000780612	S	257	GCAGTGGGTGTAGGAAAGGCCAACCAAAAGGAACTTGAGGGTATGGCAGG	3	+	131593143-131593192		MGC9.2.1.1.1.E08.F.1 NIH_MGC_331 Homo sapiens cDNA clone MGC9.2.1.1.1.E08, mRNA sequence					
Homo sapiens	RefSeq	NM_001003690.1	ILMN_23618	MAD2L1BP	NM_001003690.1	NM_001003690.1		9587	51243062	NM_001003690.1	MAD2L1BP	NP_001003690.1	ILMN_1809117	0000290025	I	97	GGCCCTTTAGCGCGGATCCTAGACAACAGGTTTTGGACCTCGAGAGCTGC	6	+	43597375-43597424	6p21.1c	Homo sapiens MAD2L1 binding protein (MAD2L1BP), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10942595] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10942595] [evidence IDA]	Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]; Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity [goid 7096] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 18022368] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]	RP1-261G23.6; CMT2; MGC11282; KIAA0110	RP1-261G23.6; CMT2; MGC11282; KIAA0110
Homo sapiens	RefSeq	XM_940792.1	ILMN_166923	LOC254398	XR_016248.1	XR_016248.1		254398	113424522	XR_016248.1	LOC254398		ILMN_1666220	0000650333	S	1423	ACTTCTGTAGGTTCCAAGGAGACACCCAAAGCTTCAAACCCAGACCTGCC	14	+	19228849-19228898	14q11.2a	PREDICTED: Homo sapiens similar to Oligophrenin 1 (LOC254398), mRNA.					
Homo sapiens	RefSeq	XM_001725928.1	ILMN_341734	LOC100131588	XM_001725928.1	XM_001725928.1		100131588	169215388	XM_001725928.1	LOC100131588	XP_001725980.1	ILMN_3283866	0000450022	M	79	TGTGTGGAGATGTCAACTAGTTGGCAGCAGAACAGTATTGGAACGGTGGT				21q22.2a	PREDICTED: Homo sapiens similar to hCG1812837 (LOC100131588), mRNA.					
Homo sapiens	RefSeq	NM_024052.4	ILMN_173259	C17ORF39	NM_024052.4	NM_024052.4		79018	47078274	NM_024052.4	C17orf39	NP_076957.3	ILMN_2113016	0003990736	S	3827	GCTGGTTTTGTTGGTTATGTGGAAATCACAAACTCCAGAGGAGCAAAGGG	17	+	17912038-17912087	17p11.2g	Homo sapiens chromosome 17 open reading frame 39 (C17orf39), mRNA.				MGC3048	MGC3048
Homo sapiens	RefSeq	NM_207672.1	ILMN_172137	GRIPAP1	NM_207672.1	NM_207672.1		56850	46592999	NM_207672.1	GRIPAP1	NP_997555.1	ILMN_2235745	0006370682	I	2513	CGTCACCATTATAAATTCTTAGTTCAGGGCTGGGCGCGGTGGCTCATGCC	X	-	48834013-48834062	Xp11.23c	Homo sapiens GRIP1 associated protein 1 (GRIPAP1), transcript variant 2, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; Small irregularly shaped intracellular vesicles to which endocytosed molecules are initially delivered [goid 5769] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	DKFZp434P0630; MGC126593; GRASP-1; KIAA1167; MGC126595	DKFZp434P0630; MGC126593; GRASP-1; KIAA1167; MGC126595
Homo sapiens	RefSeq	NM_004888.2	ILMN_42579	ATP6V1G1	NM_004888.3	NM_004888.3		9550	87159820	NM_004888.3	ATP6V1G1	NP_004879.1	ILMN_1784523	0006370091	S	919	ACCTGTGTGAAGCAGCAGCCAGCCTTAAAGTAGTCCATTCTTGCTAATGG	9	+	116400281-116400330	9q32e	Homo sapiens ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1 (ATP6V1G1), mRNA.				Vma10; ATP6J; ATP6GL; ATP6G1; DKFZp547P234; ATP6G	Vma10; ATP6J; ATP6GL; ATP6G1; DKFZp547P234
Homo sapiens	RefSeq	NM_000669.3	ILMN_175926	ADH1C	NM_000669.3	NM_000669.3		126	71565150	NM_000669.3	ADH1C	NP_000660.1	ILMN_1740717	0001510750	S	1002	CTATGCTGCTACTGACTGGACGCACGTGGAAAGGAGCTATTTTTGGAGGC	4	-	100479893-100479895:100480755-100480801	4q23b	Homo sapiens alcohol dehydrogenase 1C (class I), gamma polypeptide (ADH1C), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells [goid 6066] [evidence NAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ requiring the presence of zinc [goid 4024] [pmid 6391921] [evidence NAS]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ requiring the presence of zinc [goid 4024] [pmid 2935875] [evidence NAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ADH3	ADH3
Homo sapiens	RefSeq	NM_012099.1	ILMN_161883	CD3EAP	NM_012099.1	NM_012099.1		10849	6912245	NM_012099.1	CD3EAP	NP_036231.1	ILMN_1747870	0005220400	S	3137	ATCTCCCTGCCAGCCCCTAACTACCCTCCCCAGCCTCCAGGAACTATCCA	19	+	45913875-45913924	19q13.32a	Homo sapiens CD3e molecule, epsilon associated protein (CD3EAP), mRNA.	A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase I [goid 120] [pmid 9426281] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9426281] [evidence TAS]; RNA polymerase I, one of three nuclear DNA-directed RNA polymerases found in all eukaryotes, is a multisubunit complex; typically it produces rRNAs. Two large subunits comprise the most conserved portion including the catalytic site and share similarity with other eukaryotic and bacterial multisubunit RNA polymerases. The remainder of the complex is composed of smaller subunits (generally ten or more), some of which are also found in RNA polymerase III and others of which are also found in RNA polymerases II and III. Although the core is competent to mediate ribonucleic acid synthesis, it requires additional factors to select the appropriate template [goid 5736] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 10373416] [evidence TAS]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [evidence IEA]; The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template [goid 9303] [pmid 9426281] [evidence TAS]	Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo' [goid 3899] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9426281] [evidence TAS]	ASE-1; CAST; MGC118851; PAF49	ASE-1; CAST; MGC118851; PAF49
Homo sapiens	RefSeq	NM_002494.2	ILMN_27316	NDUFC1	NM_002494.2	NM_002494.2		4717	34850063	NM_002494.2	NDUFC1	NP_002485.1	ILMN_1733603	0001110575	S	69	GGCCCTTCAGTGCGATCAAAGTTCTACGTGCGAGAGCCGCCGAATGCCAA	4	-	140435704-140435750:140436336-140436338	4q31.1c	Homo sapiens NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa (NDUFC1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]	MGC138266; KFYI; MGC126847; MGC117464	MGC138266; KFYI; MGC126847; MGC117464
Homo sapiens	RefSeq	XR_001336.1	ILMN_37129	LOC390387	XR_001336.1	XR_001336.1		390387	89036973	XR_001336.1	LOC390387		ILMN_1694331	0007050246	I	15	TGAATGCTCTTCCCAGCTCCATTCCACAGCCGCTCTCCAGGTGTGGCCTG					PREDICTED: Homo sapiens similar to Striatin (LOC390387), misc RNA.					
Homo sapiens	RefSeq	XR_001336.1	ILMN_37129	LOC390387	XR_001336.1	XR_001336.1		390387	89036973	XR_001336.1	LOC390387		ILMN_1692982	0000270433	A	112	CACTATAATGATGTCAAAAAATTTAGCACACGGCGCGGGCGCAGGCGCGG					PREDICTED: Homo sapiens similar to Striatin (LOC390387), misc RNA.					
Homo sapiens	RefSeq	NM_031460.2	ILMN_9445	KCNK17	NM_031460.3	NM_031460.3		89822	112382373	NM_031460.3	KCNK17	NP_113648.2	ILMN_1717702	0002320296	S	1292	ACATGTCCTGGGTGACATGGGATGTGACTTTCGGGTGTCGGGGCAGCATG	6	-	39374978-39375027	6p21.2a	Homo sapiens potassium channel, subfamily K, member 17 (KCNK17), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [pmid 11248242] [evidence IDA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [pmid 11248242] [evidence IDA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	TASK-4; TALK2; TASK4; TALK-2; K2p17.1	TASK-4; TALK2; TASK4; TALK-2
Homo sapiens	RefSeq	NM_005729.3	ILMN_173003	PPIF	NM_005729.3	NM_005729.3		10105	45439321	NM_005729.3	PPIF	NP_005720.1	ILMN_1809607	0002900072	S	1788	CTGAATCCCAGCTCCTCCCCTTAGTGACCCCAAGTCTGTTTCCCTCAGCT	10	+	80784683-80784732	10q22.3e	Homo sapiens peptidylprolyl isomerase F (PPIF), nuclear gene encoding mitochondrial protein, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 1744118] [evidence TAS]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0) [goid 3755] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [evidence IEA]	Cyp-D; CYP3; MGC117207; FLJ90798	Cyp-D; CYP3; MGC117207; FLJ90798
Homo sapiens	RefSeq	XM_001717829.1	ILMN_348660	LOC100130469	XM_001717829.1	XM_001717829.1		100130469	169164739	XM_001717829.1	LOC100130469	XP_001717881.1	ILMN_3268840	0006960672	M	298	CGGGAACCAAGACATCAAAAGGGCTGCGGTAAGACGAGCCTTCTGGACGC					PREDICTED: Homo sapiens similar to hCG1646178 (LOC100130469), mRNA.					
Homo sapiens	RefSeq	NM_001038640.1	ILMN_13477	GOLGA6	NM_001038640.1	NM_001038640.1		342096	85861211	NM_001038640.1	GOLGA6	NP_001033729.1	ILMN_2110057	0003290647	S	3121	CCTGTTTTAATCACGAGTATATGTCCCAGTACACAAAAGGGCACTGGTTG	15	-	72149256-72149305	15q24.1b	Homo sapiens golgi autoantigen, golgin subfamily a, 6 (GOLGA6), mRNA.				GLP	GLP
Homo sapiens	Unigene	Hs.570977	ILMN_123158	HS.570977	Hs.570977		Hs.570977		6569609	AW237220			ILMN_1912822	0004830142	S	252	CTCTACAGCTTGGGTTTCAGATTCTTGGCTCGGCTGTCCCCTTGGACTCC	5	-	31697320-31697369		xm68e02.x1 NCI_CGAP_GC6 Homo sapiens cDNA clone IMAGE:2689370 3, mRNA sequence					
Homo sapiens	Unigene	Hs.578974	ILMN_131155	HS.578974	Hs.578974		Hs.578974		9876178	AV655164			ILMN_1913281	0001690615	S	230	ATGCACTTACAACAGCGCCGGGAGCACAGAGGCTTCCCACTACCCTTTCC	16	+	49473496-49473545		AV655164 GLC Homo sapiens cDNA clone GLCEDD10 3, mRNA sequence					
Homo sapiens	RefSeq	XR_000551.1	ILMN_178485	LOC728369	XM_001130410.1	XM_001130410.1		728369	113415475	XM_001130410.1	LOC728369	XP_001130410.1	ILMN_1729209	0002340543	S	87	TGCTGAAATCCAGCGGACTTCTCTCCCTGAGAAGTCACCACTCTCATGTG	4	+	8936075-8936124	4p16.1c	PREDICTED: Homo sapiens similar to deubiquitinating enzyme 3 (LOC728369), mRNA.					
Homo sapiens	RefSeq	XM_377830.1	ILMN_178485	LOC728369	XM_001130410.1	XM_001130410.1		728369	113415475	XM_001130410.1	LOC728369	XP_001130410.1	ILMN_1754640	0002710056	S	1186	GCAGAAGACACCGACAGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCA	4	+	8937174-8937223	4p16.1c	PREDICTED: Homo sapiens similar to deubiquitinating enzyme 3 (LOC728369), mRNA.					
Homo sapiens	RefSeq	NM_001642.1	ILMN_19935	APLP2	NM_001642.1	NM_001642.1		334	4502146	NM_001642.1	APLP2	NP_001633.1	ILMN_2081465	0003060717	S	3287	TTGTGACATTCACTCAGAGAAGACCACACCAAGGAGGGGCCGCGGCTGGC	11	+	129519476-129519525	11q24.3c	Homo sapiens amyloid beta (A4) precursor-like protein 2 (APLP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7702756] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8485127] [evidence NAS]	Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IEA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IEA]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8220435] [evidence NAS]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7702756] [evidence NAS]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8855266] [evidence IPI]	CDEBP; APPH; APPL2	CDEBP; APPH; APPL2
Homo sapiens	RefSeq	NM_001642.1	ILMN_19935	APLP2	NM_001642.1	NM_001642.1		334	4502146	NM_001642.1	APLP2	NP_001633.1	ILMN_1710482	0003450577	S	3219	TTCTCCAAAGGCACTGACCCTCGGCCTCTACTTTGTCCCCTCACCTCCAC	11	+	129519408-129519457	11q24.3c	Homo sapiens amyloid beta (A4) precursor-like protein 2 (APLP2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7702756] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8485127] [evidence NAS]	Specific actions of a newborn or infant mammal that result in the derivation of nourishment from the breast [goid 1967] [evidence IEA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IEA]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [pmid 8220435] [evidence NAS]; The behavioral interactions between organisms for the purpose of mating, or sexual reproduction resulting in the formation of zygotes [goid 7617] [evidence IEA]; The specific movement from place to place of an organism in response to external or internal stimuli. Locomotion of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7626] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of an extracellular matrix [goid 30198] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IEA]; Any process that an organism uses to control its balance, the orientation of the organism (or the head of the organism) in relation to the source of gravity. In humans and animals, balance is perceived through visual cues, the labyrinth system of the inner ears and information from skin pressure receptors and muscle and joint receptors [goid 50885] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7702756] [evidence NAS]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8855266] [evidence IPI]	CDEBP; APPH; APPL2	CDEBP; APPH; APPL2
Homo sapiens	Unigene	Hs.470804	ILMN_95060	HS.470804	Hs.470804		Hs.470804		7023760	AK002088			ILMN_1885273	0002030475	S	1830	TTCGCACTGAAAGGAACCCTGGCTCTTTGGAAAAATGGCTGATTCCAAGG	2	+	181628970-181629019		Homo sapiens cDNA FLJ11226 fis, clone PLACE1008280					
Homo sapiens	RefSeq	NM_006991.3	ILMN_890	ZNF197	NM_006991.3	NM_006991.3		10168	68800146	NM_006991.3	ZNF197	NP_008922.1	ILMN_1654689	0001470133	I	4064	CCAGAATGTCAGGTGTGGAGTTGGGCGGACAAGAGTCTGCTGATGAGGAC	3	+	44661484-44661533	3p21.32a	Homo sapiens zinc finger protein 197 (ZNF197), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8353497] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P18; ZNF20; ZKSCAN9; D3S1363E; VHLaK; ZNF166	ZNF20; D3S1363E; VHLaK; P18; ZKSCAN9; ZNF166
Homo sapiens	RefSeq	NM_001024855.1	ILMN_890	ZNF197	NM_006991.3	NM_006991.3		10168	68800146	NM_006991.3	ZNF197	NP_008922.1	ILMN_1684623	0005270204	A	699	ATTTGCCCGCATCCTCCTACTGACCTAGTGGCATTCAACCTCCAGGATCC	3	+	44647660-44647709	3p21.32a	Homo sapiens zinc finger protein 197 (ZNF197), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8353497] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	P18; ZNF20; ZKSCAN9; D3S1363E; VHLaK; ZNF166	ZNF20; D3S1363E; VHLaK; P18; ZKSCAN9; ZNF166
Homo sapiens	RefSeq	NM_000087.2	ILMN_27323	CNGA1	NM_000087.2	NM_000087.2		1259	71143140	NM_000087.2	CNGA1	NP_000078.2	ILMN_1786353	0003440280	S	2189	TCCATGAGGAAAATGTGCTTTGGTGCAAGGTACAAGGCCCACACCCTCTC	4	-	47633037-47633086	4p12a	Homo sapiens cyclic nucleotide gated channel alpha 1 (CNGA1), mRNA.	The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The outer segment of a vertebrate photoreceptor that contains discs of photoreceptive membranes [goid 1750] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7479749] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [pmid 7479749] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate) [goid 30553] [evidence IEA]	CNCG1; CNCG; RCNCalpha; RCNCa; RCNC1; CNG1	CNCG; RCNCalpha; RCNC1; CNCG1; RCNCa; CNG1
Homo sapiens	RefSeq	NM_004786.1	ILMN_7321	TXNL1	NM_004786.1	NM_004786.1		9352	4759273	NM_004786.1	TXNL1	NP_004777.1	ILMN_1756860	0000940386	S	826	AGAGGCAGAAAGAAGTGAACCAACTCAAGCTCTGGAACTGACAGAGGATG	18	-	52432717-52432766	18q21.31a	Homo sapiens thioredoxin-like 1 (TXNL1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9668102] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]; Any process that maintains the redox environment of a cell or compartment within a cell [goid 45454] [evidence IEA]	Catalysis of an oxidation-reduction (redox) reaction that interconverts reduced sulfide groups and oxidized disulfide bonds in a substrate [goid 15036] [pmid 9668102] [evidence IDA]	TXNL; TRP32; Txl; TXL-1	TXNL; TRP32; Txl; TXL-1
Homo sapiens	RefSeq	NM_004515.2	ILMN_16222	ILF2	NM_004515.2	NM_004515.2		3608	24234746	NM_004515.2	ILF2	NP_004506.2	ILMN_1745172	0005690437	S	1285	GGGAAGACTGGAGCCTAAGCTGCCTGCTACTGGGCTTTACATGGTGACAG	1	-	153634791-153634840	1q21.3d	Homo sapiens interleukin enhancer binding factor 2, 45kDa (ILF2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7519613] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 11790298] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [pmid 11739746] [evidence IDA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 7519613] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10574923] [evidence IDA]; Functions to initiate or regulate RNA polymerase II transcription [goid 3702] [pmid 7519613] [evidence TAS]; Interacting selectively with double-stranded RNA [goid 3725] [pmid 10574923] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11739746] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9442054] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10574923] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC8391; PRO3063; NF45	MGC8391; PRO3063; NF45
Homo sapiens	RefSeq	NM_198926.1	ILMN_9828	C1ORF183	NM_198926.1	NM_198926.1		55924	39545574	NM_198926.1	C1orf183	NP_945120.1	ILMN_2284113	0004780039	I	27	CTGCCCAGACACACAAAAAATGTGGCCTGAGGAAAGCCCCAAGAGGGAGG	1	-	112298343-112298392	1p13.2d	Homo sapiens chromosome 1 open reading frame 183 (C1orf183), transcript variant 2, mRNA.				FLJ31105	FLJ31105
Homo sapiens	RefSeq	NM_198926.1	ILMN_9828	C1ORF183	NM_198926.1	NM_198926.1		55924	39545574	NM_198926.1	C1orf183	NP_945120.1	ILMN_2388955	0005260008	A	1748	GCTACATGTCCAGGAACAACTGCAGCCAGGAGGCAGAACAGCCTAGGTCT	1	-	112268726-112268775	1p13.2d	Homo sapiens chromosome 1 open reading frame 183 (C1orf183), transcript variant 2, mRNA.				FLJ31105	FLJ31105
Homo sapiens	RefSeq	XM_941963.1	ILMN_45221	LOC649754	XM_941963.1	XM_941963.1		649754	89040587	XM_941963.1	LOC649754	XP_947056.1	ILMN_1735176	0002570601	I	1	ATGGGACAGTCCATACACAATTGAATCTAGCATTATTAACTTTAGATTTT					PREDICTED: Homo sapiens hypothetical protein LOC649753, transcript variant 1 (LOC649754), mRNA.					
Homo sapiens	RefSeq	XM_941963.1	ILMN_45221	LOC649754	XM_941963.1	XM_941963.1		649754	89040587	XM_941963.1	LOC649754	XP_947056.1	ILMN_1729421	0004560279	A	190	GGGGTAGAAGTTATGCTTGTGTTTCTCCAGGCCAAAATCAACAGCTGATC					PREDICTED: Homo sapiens hypothetical protein LOC649753, transcript variant 1 (LOC649754), mRNA.					
Homo sapiens	RefSeq	NM_020321.1	ILMN_28020	ACCN3	NM_020321.1	NM_020321.1		9311	9998945	NM_020321.1	ACCN3	NP_064717.1	ILMN_2368728	0006130451	A	1371	CAGCCTGCTCACCATCCTCGAGATCCTAGACTACCTCTGTGAGGTGTTCC	7	+	150380046-150380082:150380186-150380198	7q36.1d	Homo sapiens amiloride-sensitive cation channel 3 (ACCN3), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9744806] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9571199] [evidence TAS]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9744806] [evidence TAS]; The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal [goid 7600] [pmid 9744806] [evidence TAS]	 [goid 15280] [evidence IEA]; Interacting selectively with sodium ions (Na+) [goid 31402] [evidence IEA]	ASIC3; TNaC1; SLNAC1	ASIC3; TNaC1; SLNAC1
Homo sapiens	RefSeq	NM_004958.2	ILMN_26342	FRAP1	NM_004958.2	NM_004958.2		2475	19924298	NM_004958.2	FRAP1	NP_004949.1	ILMN_1769031	0001410243	S	8337	GACCTGACCGCTAGTAGGGAGGTTTATTCAGATCGCTGGCAGCCTCGGCT	1	-	11089471-11089520	1p36.22b	Homo sapiens FK506 binding protein 12-rapamycin associated protein 1 (FRAP1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11853878] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15809305] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15755954] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15718470] [evidence EXP]; A complex containing a heterodimer of a catalytic subunit and a regulatory (adaptor) subunit of any phosphoinositide 3-kinase (PI3K) [goid 5942] [pmid 15539461] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 11853878] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 15539461] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus [goid 7584] [pmid 15539461] [evidence NAS]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [pmid 11853878] [evidence TAS]; The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide [goid 16310] [pmid 11853878] [evidence IDA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [pmid 11853878] [evidence TAS]	Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 15718470] [evidence EXP]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [pmid 11853878] [evidence TAS]; Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor) [goid 16773] [evidence IEA]; Interacting selectively with a phosphorylated protein [goid 51219] [pmid 11853878] [evidence IPI]	RAPT1; FLJ44809; MTOR; FRAP; FRAP2; RAFT1	RAPT1; FLJ44809; MTOR; FRAP; FRAP2; RAFT1
Homo sapiens	RefSeq	NM_001002915.1	ILMN_7069	IGFL2	NM_001002915.1	NM_001002915.1		147920	50897279	NM_001002915.1	IGFL2	NP_001002915.1	ILMN_1790227	0004730523	S	339	GCTGGCTCCTGCTTATGTGTCAGTCTGTCTCCTCCTCTTGTGTCCAAGGG	19	+	51344130-51344134:51355512-51355556	19q13.32b	Homo sapiens IGF-like family member 2 (IGFL2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			VPRI645; UNQ645	VPRI645; UNQ645
Homo sapiens	Unigene	Hs.572735	ILMN_124916	HS.572735	Hs.572735		Hs.572735		2717307	AA707389			ILMN_1842228	0006220274	S	76	GCTTGTACTTGACTGAGAGCACTCCAAGACTTTTCCACAGAGATTGATGC	2	+	8589478-8589527		zj27f01.s1 Soares_fetal_liver_spleen_1NFLS_S1 Homo sapiens cDNA clone IMAGE:451513 3, mRNA sequence					
Homo sapiens	RefSeq	XM_001126128.2	ILMN_164579	EGFL10	XM_001126128.2	XM_001126128.2		727966	169168727	XM_001126128.2	EGFL10	XP_001126128.2	ILMN_3254696	0005700376	M	643	GTCTACAGGACTGATGGATACAACTGCCTCTGTGCCCCTGGTTATACAGG				6q12c	PREDICTED: Homo sapiens EGF-like-domain, multiple 10 (EGFL10), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the elimination of H2S or substituted H2S [goid 16846] [evidence IEA]		
Homo sapiens	RefSeq	XM_001126128.2	ILMN_164579	EGFL10	XM_001126128.2	XM_001126128.2		727966	169168727	XM_001126128.2	EGFL10	XP_001126128.2	ILMN_3178238	0006900181	A	217	CTGTGCCCACCCCTTTATACTGGACAATTTTGCCACCAACGCTATAACCC				6q12c	PREDICTED: Homo sapiens EGF-like-domain, multiple 10 (EGFL10), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the elimination of H2S or substituted H2S [goid 16846] [evidence IEA]		
Homo sapiens	RefSeq	NM_006908.3	ILMN_15342	RAC1	NM_006908.3	NM_006908.3		5879	38505163	NM_006908.3	RAC1	NP_008839.2	ILMN_2359789	0000630204	A	2040	ACACTGTCACTTGACCAATACTGACCCTCTTTACCTCGCCCACGCGGACA	7	+	6409822-6409871	7p22.1b	Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1), transcript variant Rac1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7744773] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10648409] [evidence EXP]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14737186] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence IEA]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [evidence IEA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [evidence IEA]; Any process involved in the controlled movement of a cell [goid 6928] [pmid 9572733] [evidence TAS]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 9572733] [evidence TAS]; A change in state or activity of a cell or an organism or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell [goid 6972] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9572733] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form [goid 9653] [pmid 9572733] [evidence TAS]; Any process that modulates the frequency, rate or extent of the chemical reactions involving hydrogen peroxide [goid 10310] [pmid 16636067] [evidence TAS]; The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 16358] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [evidence IEA]; Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell [goid 30032] [pmid 9312003] [evidence IMP]; Assembly of actin filaments by the addition of actin monomers to a filament [goid 30041] [pmid 9312003] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of actin polymerization [goid 30838] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell [goid 31529] [pmid 9312003] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of Rho protein signal transduction [goid 35025] [pmid 9312003] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of phosphoinositide 3-kinase activity [goid 43552] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of receptor mediated endocytosis, the uptake of external materials by cells, utilizing receptors to ensure specificity of transport [goid 48261] [pmid 9312003] [evidence TAS]; Any process by which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within a membrane [goid 51668] [pmid 16636067] [evidence IMP]; Any process that modulates the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals [goid 60263] [pmid 16636067] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9312003] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with any enzyme [goid 19899] [pmid 16636067] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) using energy from the hydrolysis of GTP [goid 30742] [pmid 10954424] [evidence IPI]	MGC111543; MIG5; TC-25; p21-Rac1	MGC111543; MIG5; TC-25; p21-Rac1
Homo sapiens	RefSeq	XM_931495.1	ILMN_34785	LOC653276	XM_931495.1	XM_931495.1		653276	89035740	XM_931495.1	LOC653276	XP_936588.1	ILMN_1664453	0002070338	S	1	ATGGCGGCCTTGGCGCCCGCCCTGCGCCCAGGGACACAGACCGGAATCCC	12	-	117026466-117026515	12q24.23a	PREDICTED: Homo sapiens hypothetical LOC653276 (LOC653276), mRNA.					
Homo sapiens	RefSeq	NM_152396.1	ILMN_13383	METTL6	NM_152396.2	NM_152396.2		131965	118442824	NM_152396.2	METTL6	NP_689609.2	ILMN_1661998	0001980470	S	435	CAGACACTGGACCACCAGAGAGTTTGAGGAGCTAAGATCATGTAGAGAGT	3	-	15466595-15466596:15467794-15467841	3p24.3e	Homo sapiens methyltransferase like 6 (METTL6), mRNA.			Catalysis of the transfer of a methyl group to an acceptor molecule [goid 8168] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC24132	MGC24132
Homo sapiens	RefSeq	XM_936417.1	ILMN_19953	RGAG4	NM_001024455.2	NM_001024455.2		340526	134948548	NM_001024455.2	RGAG4	NP_001019626.1	ILMN_1757537	0002750411	A	4439	AGGGATAGAGCAGATGAGCAGTGAGCTGGTTTCCACCCTCTGGGGCAGGA	X	-	71347263-71347312	Xq13.1d	Homo sapiens retrotransposon gag domain containing 4 (RGAG4), mRNA.				KIAA2001; Mart5; Mar5; 6430402L03Rik	
Homo sapiens	RefSeq	NM_001024455.1	ILMN_19953	RGAG4	NM_001024455.2	NM_001024455.2		340526	134948548	NM_001024455.2	RGAG4	NP_001019626.1	ILMN_1693392	0001340014	I	2147	CCCCATTTGCTGACCAGGACTTCAGGGAGTTTCAGACCTGCAGAACCTGA	X	-	71349555-71349604	Xq13.1d	Homo sapiens retrotransposon gag domain containing 4 (RGAG4), mRNA.				KIAA2001; Mart5; Mar5; 6430402L03Rik	KIAA2001; 6430402L03Rik
Homo sapiens	RefSeq	NM_001036.2	ILMN_22832	RYR3	NM_001036.2	NM_001036.2		6263	37704385	NM_001036.2	RYR3	NP_001027.2	ILMN_1796455	0000430253	S	15446	GCCAAAATGGAGTAATGCTTTATGGTCCCTTGTAAGTAGTGGAGCTGCTC	15	+	31945482-31945531	15q13.3d-q14a	Homo sapiens ryanodine receptor 3 (RYR3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules) [goid 30314] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of calcium (Ca) ions into, out of, within or between cells [goid 6816] [pmid 9395096] [evidence TAS]; The regulation of the levels, transport, and metabolism of calcium ions within a cell or between a cell and its external environment [goid 6874] [evidence IEA]; A process whereby force is generated within striated muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. Striated muscle is a type of muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations observable at the level of the light microscope [goid 6941] [evidence IEA]	Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts [goid 5219] [evidence IEA]; Catalysis of facilitated diffusion of a calcium (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5262] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5216] [evidence IEA]; Catalysis of the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts [goid 5219] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA];  [goid 15278] [pmid 9395096] [evidence TAS]		
Homo sapiens	RefSeq	NM_015636.2	ILMN_139347	EIF2B4	NM_015636.2	NM_015636.2		8890	26986531	NM_015636.2	EIF2B4	NP_056451.2	ILMN_1687430	0005960546	A	1423	ACATGTTGCGCTGGCTAACTGGCAGAACCACGCATCCCTACGGTTGTTGA	2	-	27440886-27440935	2p23.3a	Homo sapiens eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa (EIF2B4), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 11323413] [evidence IDA]; A multisubunit guanine nucleotide exchange factor which catalyzes the exchange of GDP bound to initiation factor eIF2 for GTP, generating active eIF2-GTP. In humans, it is composed of five subunits, alpha, beta, delta, gamma and epsilon [goid 5851] [pmid 15060152] [evidence IDA]	The process whose specific outcome is the progression of the ovarian follicle over time, from its formation to the mature structure [goid 1541] [pmid 15507143] [evidence IMP]; The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA [goid 6413] [pmid 16289705] [evidence IDA]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [pmid 12556349] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism [goid 9408] [pmid 12499492] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus [goid 9749] [evidence ISS]; The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system [goid 14003] [pmid 15217090] [evidence IMP]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [pmid 14566705] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals [goid 43434] [evidence ISS]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 51716] [pmid 8626696] [evidence IDA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [pmid 16289705] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 11323413] [evidence IDA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [pmid 15054402] [evidence IMP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15060152] [evidence IPI]; Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide [goid 3743] [evidence IEA]	EIF-2B; DKFZp586J0119; EIF2Bdelta; EIF2B	EIF-2B; DKFZp586J0119; EIF2Bdelta; EIF2B
Homo sapiens	RefSeq	NM_032818.1	ILMN_138254	C9ORF100	NM_032818.1	NM_032818.1		84904	14249513	NM_032818.1	C9orf100	NP_116207.1	ILMN_1681221	0006370528	I	2609	ACTCTAGAAACACTGGCTGCAGCAATCAACCTCCTGTGCCAAGGCTGGCC	9	-	35649077-35649126	9p13.3a	Homo sapiens chromosome 9 open reading frame 100 (C9orf100), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the frequency, rate or extent of Rho protein signal transduction [goid 35023] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase of the Rho family. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5089] [evidence IEA]	FLJ14642; RP11-331F9.7; MGC44886	RP11-331F9.7; FLJ14642; MGC44886
Homo sapiens	RefSeq	NM_005135.1	ILMN_162068	SLC12A6	NM_001042496.1	NM_001042496.1		9990	110224455	NM_001042496.1	SLC12A6	NP_001035961.1	ILMN_1767992	0001580653	S	4073	TCCCTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG	15	-	34525828-34525877	15q14a	Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 6 (SLC12A6), transcript variant 5, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 10187864] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10187864] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The regulation of the levels, transport, and metabolism of ions within a cell or between a cell and its external environment [goid 6873] [pmid 99214639] [evidence IC ]; Any process involved in maintaining the equilibrium of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell [goid 6884] [pmid 99214639] [evidence NAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 99214639] [evidence NAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of sodium ions (Na+) into, out of, within or between cells [goid 6814] [evidence IEA]; The directed movement of chloride into, out of, within or between cells [goid 6821] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy [goid 15293] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Cl-(out) = K+(in) + Cl-(in) [goid 15379] [pmid 99214639] [evidence NAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in) [goid 15377] [evidence IEA]	KCC3; KCC3B; ACCPN; KCC3A; DKFZP434D2135	KCC3B; ACCPN; KCC3A; DKFZP434D2135; KCC3
Homo sapiens	RefSeq	NM_138689.2	ILMN_15524	PPP1R14B	NM_138689.2	NM_138689.2		26472	62122941	NM_138689.2	PPP1R14B	NP_619634.1	ILMN_1659888	0005290097	S	728	GAGAACGGTGGCTCCCACAGGACAATCGCTGCCCCCCAACCTCGTAGCAA	11	-	64012160-64012209	11q13.1b	Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 14B (PPP1R14B), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [evidence IEA]	Stops, prevents or reduces the activity of a protein phosphatase, an enzyme that hydrolyzes phosphate groups from proteins [goid 4864] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	SOM172; PLCB3N; PNG; PHI-1	SOM172; PLCB3N; PNG; PHI-1
Homo sapiens	RefSeq	NM_019859.2	ILMN_28645	HTR7	NM_019859.2	NM_019859.2		3363	30795198	NM_019859.2	HTR7	NP_062873.1	ILMN_1652732	0006180164	I	1554	GAGGGTGCTGTTGAGACCAGAAAAGAGGCCACCGGTATCTGTGTGGGTGC	10	-	92493362-92493411	10q23.31d	Homo sapiens 5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled) (HTR7), transcript variant d, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8226867] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of a nucleotide cyclase activity and a subsequent change in the concentration of a cyclic nucleotide [goid 7187] [pmid 8226867] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 8226867] [evidence TAS]; Any biological process in an organism that recur with a regularity of approximately 24 hours [goid 7623] [pmid 8398139] [evidence TAS]; The flow of blood through the body of an animal, enabling the transport of O2 and nutrients to the tissues and the removal of waste products [goid 8015] [pmid 8226867] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with melanocortin to initiate a change in cell activity [goid 4977] [evidence IEA]; Combining with the biogenic amine serotonin, a neurotransmitter and hormone found in vertebrates, invertebrates and plants, to initiate a change in cell activity [goid 4993] [pmid 8226867] [evidence TAS]	5-HT7	5-HT7
Homo sapiens	RefSeq	NM_013339.2	ILMN_168249	ALG6	NM_013339.2	NM_013339.2		29929	38026891	NM_013339.2	ALG6	NP_037471.2	ILMN_1771411	0006960243	S	1627	GACGTTGATGACTGTCACACTGGATCCTCCTCAGAAACTACCGGACTTGT	1	+	63675114-63675163	1p31.3c	Homo sapiens asparagine-linked glycosylation 6 homolog (S. cerevisiae, alpha-1,3-glucosyltransferase) (ALG6), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 11106564] [evidence IGI]; The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan [goid 6487] [pmid 10359825] [evidence IGI]	Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid [goid 46527] [pmid 10359825] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]		
Homo sapiens	RefSeq	XM_942297.1	ILMN_32105	LOC652688	XM_942297.1	XM_942297.1		652688	89076998	XM_942297.1	LOC652688	XP_947390.1	ILMN_1694767	0004880605	S	61	ACTGTGCTTATGGAGGACAGTGATGGGAACTGTGAAGGGTCGAGCCTTGT					PREDICTED: Homo sapiens similar to Zinc finger protein basonuclin-1 (LOC652688), mRNA.					
Homo sapiens	RefSeq	XM_001717333.1	ILMN_342718	LOC100130154	XM_001717333.1	XM_001717333.1		100130154	169163340	XM_001717333.1	LOC100130154	XP_001717385.1	ILMN_3261938	0002370167	M	1	ATGGCAGACAAACCAGACGTGGGGGGAATCGCCAGCTTCAATAGGGCCAA	2	-	236455826-236455875	2q37.2b	PREDICTED: Homo sapiens similar to thymosin, beta 10 (LOC100130154), mRNA.					
Homo sapiens	RefSeq	NM_002356.4	ILMN_165126	MARCKS	NM_002356.5	NM_002356.5		4082	153070259	NM_002356.5	MARCKS	NP_002347.5	ILMN_1807042	0006060484	S	2248	GCAACTTTCCACCCTGCCCATTTTTGTAAAACTGCAGTCATCTTGGACCT	6	+	114182609-114182658	6q22.1a	Homo sapiens myristoylated alanine-rich protein kinase C substrate (MARCKS), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [evidence IEA]; The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins [goid 5938] [evidence IEA]; The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes [goid 15629] [pmid 1560845] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The enlarged, fluid filled nucleus of a primary oocyte, the development of which is suspended in prophase I of the first meiotic division between embryohood and sexual maturity [goid 42585] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [pmid 1560845] [evidence TAS]; Interacting selectively with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits [goid 51015] [pmid 1560845] [evidence TAS]	MACS; 80K-L; PRKCSL; FLJ14368; MRACKS; PKCSL; FLJ90045	MACS; 80K-L; PRKCSL; FLJ14368; MRACKS; PKCSL
Homo sapiens	Unigene	Hs.539516	ILMN_104567	HS.539516	Hs.539516		Hs.539516		5234633	AI768124			ILMN_1909377	0004290372	S	384	GCATTTGACCTGCCATCTAGCTTTTGCTGAACGCTCCTTTGTCCTCTGGG					wg81d08.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapiens cDNA clone IMAGE:2371503 3, mRNA sequence					
Homo sapiens	RefSeq	NM_144670.2	ILMN_17375	A2ML1	NM_144670.2	NM_144670.2		144568	74271844	NM_144670.2	A2ML1	NP_653271.2	ILMN_2136495	0004050154	S	4889	TGTAATCGCAGCCCCTTGGAAGGCCAAGGCAGGAGAATCGCCTCAACACT	12	+	8920412-8920461	12p13.31b	Homo sapiens alpha-2-macroglobulin-like 1 (A2ML1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 16298998] [evidence IDA]	Any process that modulates the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins [goid 52548] [pmid 16298998] [evidence IDA]	Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA];  [goid 17114] [pmid 16298998] [evidence IDA]	FLJ41597; FLJ25179; DKFZp686O1010; DKFZp686L1821; DKFZp686D2011; FLJ41598; FLJ39129; DKFZp686C1729; DKFZp686G1812; CPAMD9; FLJ16045; FLJ41607	DKFZp686O1010; DKFZp686L1821; CPAMD9; FLJ16045; FLJ41607; FLJ41597; FLJ25179; DKFZp686D2011; FLJ41598; FLJ39129; DKFZp686C1729; DKFZp686G1812
Homo sapiens	RefSeq	XM_926127.1	ILMN_44119	LOC642675	XM_926127.1	XM_926127.1		642675	88944408	XM_926127.1	LOC642675	XP_931220.1	ILMN_1760595	0000430762	S	232	CCAAACCTTCAAGATCTTACTGCCTTCCGCCACGGCTGCCTTTGGAGAGC	1	-	78212-78243:81566-81583		PREDICTED: Homo sapiens similar to ribosomal protein L36 (LOC642675), mRNA.					
Homo sapiens	RefSeq	XM_928682.1	ILMN_35322	LOC645671	XM_928682.1	XM_928682.1		645671	88976736	XM_928682.1	LOC645671	XP_933775.1	ILMN_1697922	0000020253	S	4448	CCCAGCAGATTGACTACAGTAGGGGTTCCATATATCACAGTGTAGAAGGG	4	+	123380555-123380604		PREDICTED: Homo sapiens similar to CG15133-PA (LOC645671), mRNA.					
Homo sapiens	RefSeq	XM_936257.1	ILMN_165880	LOC730432	XM_001125680.1	XM_001125680.1		730432	113424875	XM_001125680.1	LOC730432	XP_001125680.1	ILMN_1697024	0002690300	S	4492	GCTTATGTCTGTATAGGAATGTCACAGTGCAAGATGCTGCTAGCCCAGGC					PREDICTED: Homo sapiens similar to serine/threonine/tyrosine interacting protein, transcript variant 1 (LOC730432), mRNA.					
Homo sapiens	RefSeq	NM_005429.2	ILMN_161973	VEGFC	NM_005429.2	NM_005429.2		7424	19924300	NM_005429.2	VEGFC	NP_005420.1	ILMN_1701204	0007320039	S	1576	CTGTTACAGACGGCCATGTACGAACCGCCAGAAGGCTTGTGAGCCAGGAT	4	-	177842138-177842187	4q34.3a	Homo sapiens vascular endothelial growth factor C (VEGFC), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 9684805] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The volume enclosed by the membrane of the platelet alpha granule [goid 31093] [pmid 9684805] [evidence EXP]	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels [goid 1525] [evidence IEA]; The orderly movement of cells from one site to another along a substrate such as the extracellular matrix; the migrating cell forms a protrusion that attaches to the substrate [goid 6929] [pmid 8617204] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8617204] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 8617204] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The process by which the anatomical structures of embryonic epithelia are generated and organized. Morphogenesis pertains to the creation of form [goid 16331] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [evidence IEA]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with vascular endothelial growth factor receptor 3 [goid 43185] [evidence IEA]	VRP; Flt4-L	VRP; Flt4-L
Homo sapiens	Unigene	Hs.167721	ILMN_80111	HS.167721	Hs.167721		Hs.167721		21753861	AK094744			ILMN_1832155	0006450088	S	2013	GCAGCACCTTTCTTTGTCTCTGGAATGCCCAAGATCTCTACTGCATCCTG	11	-	102426924-102426973		Homo sapiens cDNA FLJ37425 fis, clone BRAWH2001530					
Homo sapiens	RefSeq	NM_020178.3	ILMN_26058	CA10	NM_020178.3	NM_020178.3		56934	48976057	NM_020178.3	CA10	NP_064563.1	ILMN_1665856	0003840687	S	2971	GCAGGCGACAGACTTCTTGCGTTTCAAGACTGCCATGCCCCCCTGTGATG	17	-	47062851-47062900	17q21.33c	Homo sapiens carbonic anhydrase X (CA10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 11311946] [evidence NAS]; The chemical reactions and pathways involving compounds containing a single carbon atom [goid 6730] [evidence IEA]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 11311946] [evidence ND ]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: H2CO3 = CO2 + H2O [goid 4089] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	CARPX; HUCEP-15; CA-RPX	CARPX; HUCEP-15; CA-RPX
Homo sapiens	RefSeq	NM_002456.4	ILMN_18407	MUC1	NM_002456.4	NM_002456.4		4582	65301116	NM_002456.4	MUC1	NP_002447.4	ILMN_1677314	0000520128	I	229	TCTACTGGGGTCTCTTTCTTTTTCCTGTCTTTTCACATTTCAAACCTCCA	1	-	155160708-155160757	1q22a	Homo sapiens mucin 1, cell surface associated (MUC1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1697589] [evidence TAS]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]		The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [evidence IEA]	PEMT; PUM; PEM; EMA; H23AG; MAM6; CD227	PEMT; PUM; PEM; EMA; H23AG; MAM6; CD227
Homo sapiens	RefSeq	XR_041805.1	ILMN_348401	LOC730202	XR_041805.1	XR_041805.1		730202	169207079	XR_041805.1	LOC730202		ILMN_3304396	0003520259	M	1449	ATCGCTTGGGCAGGAGTTAGAGACCAGCCTGGGCAATATAGGGAAACCCC	14	-	96036952-96037001	14q32.2a	PREDICTED: Homo sapiens hypothetical protein LOC730202 (LOC730202), miscRNA.					
Homo sapiens	RefSeq	NM_014511.3	ILMN_27681	KIR2DL3	NM_014511.3	NM_014511.3		3804	71143142	NM_014511.3	KIR2DL3	NP_055326.3	ILMN_2402106	0001340670	A	369	TGTCAGCTCCGAGTGACCCACTGCTTGTTTCTGTCACAGGAAACCCTTCA	19	+	55253687-55253695:55255507-55255536:55258787-55258797	19q13.42b	Homo sapiens killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 (KIR2DL3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9059894] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7749980] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 9059894] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7749980] [evidence TAS]	CD158B2; CD158b; KIR-K15; NKAT2B; NKAT2A; KIRCL23; CL-6; p58 KIR; KIR-023GB; KIR-K7b; NKAT2; MGC129943; NKR-K7; p58; NKAT; GL183; KIR-K7c	CD158B2; CD158b; KIR-K15; NKAT2B; NKAT2A; KIRCL23; CL-6; p58 KIR; KIR-023GB; KIR-K7b; NKAT2; MGC129943; NKR-K7; p58; NKAT; GL183; KIR-K7c
Homo sapiens	RefSeq	NM_015868.2	ILMN_27681	KIR2DL3	NM_014511.3	NM_014511.3		3804	71143142	NM_014511.3	KIR2DL3	NP_055326.3	ILMN_1667232	0003140242	A	1151	GGCACTTAGACACGTGCTGTTCCACCTTCCCTCATGCTGTTCCACCTCCC	19	+	55264353-55264402	19q13.42b	Homo sapiens killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 (KIR2DL3), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9059894] [evidence TAS]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [pmid 7749980] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an antigen, any substance which is capable of inducing a specific immune response and of reacting with the products of that response, the specific antibody or specifically sensitized T-lymphocytes, or both. Binding may counteract the biological activity of the antigen [goid 3823] [pmid 9059894] [evidence TAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 7749980] [evidence TAS]	CD158B2; CD158b; KIR-K15; NKAT2B; NKAT2A; KIRCL23; CL-6; p58 KIR; KIR-023GB; KIR-K7b; NKAT2; MGC129943; NKR-K7; p58; NKAT; GL183; KIR-K7c	CD158B2; CD158b; KIR-K15; NKAT2B; NKAT2A; KIRCL23; CL-6; p58 KIR; KIR-023GB; KIR-K7b; NKAT2; MGC129943; NKR-K7; p58; NKAT; GL183; KIR-K7c
Homo sapiens	RefSeq	NM_002411.1	ILMN_17956	SCGB2A2	NM_002411.2	NM_002411.2		4250	142378579	NM_002411.2	SCGB2A2	NP_002402.1	ILMN_1723333	0003130706	S	342	CTTTCTGCAAGACCTTTGGCTCACAGAACTGCAGGGTATGGTGAGAAACC	11	+	61797044-61797093	11q12.3a	Homo sapiens secretoglobin, family 2A, member 2 (SCGB2A2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a steroid, any of a large group of substances that have in common a ring system based on 1,2-cyclopentanoperhydrophenanthrene [goid 5496] [evidence IEA]	UGB2; MGC71974; MGB1	UGB2; MGB1
Homo sapiens	RefSeq	XM_926450.1	ILMN_37798	LOC653199	XM_935633.2	XM_935633.2		653199	113419850	XM_935633.2	LOC653199	XP_940726.2	ILMN_1663054	0006770180	S	33	GTCTGCCCCAAGCAGCCTGAGCCCTCAGGCACCCCCCAGCTCCCTGGGAG				7q35a	PREDICTED: Homo sapiens hypothetical LOC653199 (LOC653199), mRNA.					
Homo sapiens	RefSeq	NM_014719.1	ILMN_37798	LOC653199	XM_935633.2	XM_935633.2		653199	113419850	XM_935633.2	LOC653199	XP_940726.2	ILMN_1670378	0006250463	A	1883	CTCTGTGGCCCCCAGTTCGGGAGAAGAGAGTCAGAATCTACCTGAGCAAG				7q35a	PREDICTED: Homo sapiens hypothetical LOC653199 (LOC653199), mRNA.					KIAA0738
Homo sapiens	RefSeq	NM_002072.2	ILMN_18320	GNAQ	NM_002072.2	NM_002072.2		2776	40254461	NM_002072.2	GNAQ	NP_002063.2	ILMN_1659923	0006110494	S	1493	CCCGCTAATTCATACCTCCCTCCTGATGTTTTTCCCAGGTTACAATGGCC	9	-	80335817-80335866	9q21.2a-q21.2b	Homo sapiens guanine nucleotide binding protein (G protein), q polypeptide (GNAQ), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9175863] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9175863] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9198220] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2841328] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10633085] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1851174] [evidence EXP]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IEA]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IEA]; Any process that modulates the frequency, rate or extent of melanocyte differentiation [goid 45634] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IEA]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [evidence IEA]; Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. An action potential is a spike of membrane depolarization and repolarization that travels along the membrane of a cell [goid 1508] [evidence IEA]; The transfer, from NAD, of ADP-ribose to protein amino acids [goid 6471] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP [goid 7189] [evidence IEA]; The initiation of the activity of the inactive enzyme phospolipase C as the result of a series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7202] [pmid 8825633] [evidence TAS]; The series of molecular signals generated as a consequence of glutamate binding to a cell surface receptor [goid 7215] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 9238049] [evidence TAS]; The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development [goid 16322] [evidence IEA]; The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell [goid 21884] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. Morphogenesis pertains to the creation of form. A digit is one of the terminal divisions of an appendage. For example a finger or toe [goid 42733] [evidence IEA]; Any process that modulates the frequency, rate or extent of melanocyte differentiation [goid 45634] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IEA]; The series of molecular signals generated as a consequence of a dopamine receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 60158] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 9238049] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]; Interacting selectively with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate [goid 19001] [evidence IEA]	GAQ; G-ALPHA-q	GAQ; G-ALPHA-q
Homo sapiens	RefSeq	NM_001014451.1	ILMN_17268	DDX19B	NM_001014451.1	NM_001014451.1		11269	62241023	NM_001014451.1	DDX19B	NP_001014451.1	ILMN_1707123	0002510553	A	496	AGCCAAGTAGAACCTGCAAACAAATACCCCCAGTGTCTATGTCTCTCCCC	16	+	68916059-68916091:68916978-68916994	16q22.1f	Homo sapiens DEAD (Asp-Glu-Ala-As) box polypeptide 19B (DDX19B), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 10428971] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10428971] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 10428971] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10428971] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RNAh; DDX19; DBP5	DDX19; DBP5; RNAh
Homo sapiens	RefSeq	NM_001014451.1	ILMN_17268	DDX19B	NM_001014451.1	NM_001014451.1		11269	62241023	NM_001014451.1	DDX19B	NP_001014451.1	ILMN_2381841	0004860064	A	1536	GTTCAGGGCACAGGCCCCGACATCACCCCAAGGACAACGGCACAAGTAGA	16	+	68925046-68925095	16q22.1f	Homo sapiens DEAD (Asp-Glu-Ala-As) box polypeptide 19B (DDX19B), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 10428971] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10428971] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The directed movement of mRNA from the nucleus to the cytoplasm [goid 6406] [pmid 10428971] [evidence TAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 10428971] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the unwinding of a DNA or RNA helix [goid 8026] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	RNAh; DDX19; DBP5	DDX19; DBP5; RNAh
Homo sapiens	RefSeq	NM_022805.2	ILMN_22193	SNRPN	NM_022806.2	NM_022806.2		6638	29540553	NM_022806.2	SNRPN	NP_073717.1	ILMN_1693341	0004850133	A	551	CACCAAGAGGTGGTTAAAGCCATATTGGAGTAGCGAGGAATCTGATTCCA	15	+	22764261-22764310	15q11.2e	Homo sapiens small nuclear ribonucleoprotein polypeptide N (SNRPN), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 1533223] [evidence TAS]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 7512861] [evidence TAS]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 1533223] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14715275] [evidence IPI]	SNURF-SNRPN; HCERN3; SMN; RT-LI; SM-D; SNRNP-N	SMN; SM-D; SNRNP-N; SNURF-SNRPN; HCERN3; RT-LI
Homo sapiens	RefSeq	NM_005678.3	ILMN_22193	SNRPN	NM_022806.2	NM_022806.2		6638	29540553	NM_022806.2	SNRPN	NP_073717.1	ILMN_1656537	0002480291	I	613	GCTCCATCTACTCTTTGAAGCTTCTGCCCAGCTTGCATTGTTTCTAGGAG	15	+	22770551-22770600	15q11.2e	Homo sapiens small nuclear ribonucleoprotein polypeptide N (SNRPN), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 1533223] [evidence TAS]; A complex composed of RNA of the small nuclear RNA (snRNA) class and protein, found in the nucleus of a eukaryotic cell. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP or U4/U6 snRNP. Many, but not all, of these complexes are involved in splicing of nuclear mRNAs [goid 30532] [pmid 7512861] [evidence TAS]	The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 1533223] [evidence TAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14715275] [evidence IPI]	SNURF-SNRPN; HCERN3; SMN; RT-LI; SM-D; SNRNP-N	
Homo sapiens	RefSeq	NM_002497.2	ILMN_14211	NEK2	NM_002497.2	NM_002497.2		4751	49574505	NM_002497.2	NEK2	NP_002488.1	ILMN_1653822	0001570309	S	1366	AGTCCAAGTGCAAGGACCTGAAGAAAAGGCTTCACGCTGCCCAGCTGCGG	1	-	211836836-211836885	1q32.3a	Homo sapiens NIMA (never in mitosis gene a)-related kinase 2 (NEK2), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 9430639] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IEA]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 9430639] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9430639] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9647649] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NLK1; NEK2A; HsPK 21; HsPK21	NLK1; NEK2A; HsPK 21; HsPK21
Homo sapiens	RefSeq	NM_002497.2	ILMN_14211	NEK2	NM_002497.2	NM_002497.2		4751	49574505	NM_002497.2	NEK2	NP_002488.1	ILMN_2051373	0004610669	S	2060	CTGTTTAACAGAATATGAGCTGTCTGTCATTTACCTACTTCTTTCCCACT	1	-	211836142-211836191	1q32.3a	Homo sapiens NIMA (never in mitosis gene a)-related kinase 2 (NEK2), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [evidence IEA]; Either of the ends of a spindle, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules [goid 922] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 9430639] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11742988] [evidence EXP]; A thin cytoplasmic bridge formed between daughter cells at the end of cytokinesis. The midbody forms where the contractile ring constricts, and may persist for some time before finally breaking to complete cytokinesis [goid 30496] [evidence IEA]	The cell cycle process whereby replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. Each replicated chromosome, composed of two sister chromatids, aligns at the cell equator, paired with its homologous partner. One homolog of each morphologic type goes into each of the resulting chromosome sets [goid 70] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Any process that modulates the frequency, rate or extent of mitosis [goid 7088] [pmid 9430639] [evidence TAS]; Progression through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations [goid 7126] [evidence IEA]; The process resulting in the physical partitioning and separation of a cell into daughter cells [goid 51301] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9430639] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9647649] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	NLK1; NEK2A; HsPK 21; HsPK21	NLK1; NEK2A; HsPK 21; HsPK21
Homo sapiens	RefSeq	NM_001616.3	ILMN_28763	ACVR2A	NM_001616.3	NM_001616.3		92	65508448	NM_001616.3	ACVR2A	NP_001607.1	ILMN_1670912	0004260681	S	4322	GCCCAGATCTCCGCGTAAGGAATGCTTTATGATCAACTTGCCATAGGACT	2	+	148403941-148403990	2q22.3c-q23.1a	Homo sapiens activin A receptor, type IIA (ACVR2A), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 14738881] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17356069] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 1314589] [evidence TAS]	A complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals. In Deuterostomes the initial blastopore becomes the anus and the mouth forms second [goid 1702] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The establishment of an organism's body plan or part of an organism with respect to the left and right halves. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry [goid 7368] [evidence IEA]; The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue [goid 7498] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of bone mineralization [goid 30501] [pmid 18436533] [evidence IMP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 15621726] [evidence EXP]; A series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor [goid 30509] [pmid 18436533] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the activity of any activin receptor signaling pathway [goid 32927] [pmid 12665502] [evidence IDA]; The expulsion of seminal fluid, thick white fluid containing spermatozoa, from the male genital tract [goid 42713] [evidence IEA]; The hardening, enlarging and rising of the penis which often occurs in the sexually aroused male and enables sexual intercourse. Achieved by increased inflow of blood into the vessels of erectile tissue, and decreased outflow [goid 43084] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of erythrocyte differentiation [goid 45648] [pmid 9032295] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of osteoblast differentiation [goid 45669] [pmid 18436533] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [evidence IEA]; Any process that modulates the activity of the enzyme nitric-oxide synthase [goid 50999] [evidence IEA]; The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules [goid 60011] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular messenger, and in cooperation with a nearby primary receptor, initiating a change in cell activity [goid 15026] [pmid 10746731] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Combining with activin, one of two gonadal glycoproteins related to transforming growth factor beta, to initiate a change in cell activity [goid 17002] [pmid 12665502] [evidence IDA]; Interacting selectively with any growth factor, proteins or polypeptides that stimulate a cell or organism to grow or proliferate [goid 19838] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with a domain within the same polypeptide [goid 43621] [evidence IEA]; Interacting selectively with activin, a dimer of inhibin-beta subunits [goid 48185] [pmid 9032295] [evidence IPI]; Interacting selectively with inhibin beta-A [goid 48186] [pmid 7890768] [evidence IDA]	ACTRII; ACVR2	ACTRII; ACVR2
Homo sapiens	RefSeq	XR_041205.1	ILMN_346013	LOC647030	XR_041205.1	XR_041205.1		647030	169171509	XR_041205.1	LOC647030		ILMN_3211906	0000290180	A	262	CGGCCTGCCAGGAGTGAAGAAAGCTTTGAGCAAGTATGGTCCTGCCGATG				7q32.3b	PREDICTED: Homo sapiens misc_RNA (LOC647030), miscRNA.					
Homo sapiens	RefSeq	XM_939728.1	ILMN_40014	LOC654128	XM_939728.1	XM_939728.1		654128	89034948	XM_939728.1	LOC654128	XP_944821.1	ILMN_1684413	0005050075	S	1166	AGATGTGCAGCCCCCTCCTCTGCTGGCCTTGGACCTTGGACCTCACACGT					PREDICTED: Homo sapiens similar to SH3 and multiple ankyrin repeat domains protein 2 (Shank2) (Proline-rich synapse associated protein 1) (ProSAP1) (Cortactin-binding protein 1) (CortBP1) (GKAP/SAPAP interacting protein) (SPANK-3) (LOC654128), mRNA.					
Homo sapiens	RefSeq	NM_001031696.1	ILMN_6460	PLD3	NM_001031696.1	NM_001031696.1		23646	72534683	NM_001031696.1	PLD3	NP_001026866.1	ILMN_1666976	0006380093	A	1838	CCCTGGCCCACCCCCACTTTCCAGGGCAAAAAGGGCCCAGGGTTATAATA	19	+	45576162-45576211	19q13.2b	Homo sapiens phospholipase D family, member 3 (PLD3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [pmid 9140189] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HU-K4	HU-K4
Homo sapiens	RefSeq	NM_001031696.1	ILMN_6460	PLD3	NM_001031696.1	NM_001031696.1		23646	72534683	NM_001031696.1	PLD3	NP_001026866.1	ILMN_1713013	0006250327	I	1	GTCAGGCGGGGATACAGCCTGGAAGGTAATGCATGTCCATGGTACACAAA	19	+	45546447-45546471:45563300-45563324	19q13.2b	Homo sapiens phospholipase D family, member 3 (PLD3), transcript variant 1, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 16042] [evidence IEA]	Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate [goid 4630] [pmid 9140189] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	HU-K4	HU-K4
Homo sapiens	RefSeq	XM_944534.1	ILMN_42881	LOC442597	XM_944534.1	XM_944534.1		442597	89026224	XM_944534.1	LOC442597	XP_949627.1	ILMN_1655842	0002710121	A	954	TGCTTGGAATGTGGGAGCCGCTGATGATGCCTCTTGTCTGTGTGTCTGAC					PREDICTED: Homo sapiens hypothetical LOC442597 (LOC442597), mRNA.					
Homo sapiens	RefSeq	NM_144715.2	ILMN_164106	EFHB	NM_144715.2	NM_144715.2		151651	32526891	NM_144715.2	EFHB	NP_653316.2	ILMN_2199409	0004810524	S	2614	CTAGATGAGCTACGGCATGCAGACCGGATCAAGTGTAAAACACTCATGTG	3	-	19896127-19896176	3p24.3c	Homo sapiens EF-hand domain family, member B (EFHB), mRNA.			Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	FLJ25200	FLJ25200
Homo sapiens	RefSeq	NM_198478.2	ILMN_162107	NKPD1	NM_198478.2	NM_198478.2		284353	115647959	NM_198478.2	NKPD1	NP_940880.2	ILMN_2110338	0000630504	S	1529	ACCAAGGCGTTGCAGAACGTGCTCGACCTGGACGGCGACCCCGAGCTCTT	19	-	50347372-50347421	19q13.32a	Homo sapiens NTPase, KAP family P-loop domain containing 1 (NKPD1), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ33600	FLJ33600
Homo sapiens	RefSeq	XM_929439.1	ILMN_36291	LOC646515	XM_929439.1	XM_929439.1		646515	88976786	XM_929439.1	LOC646515	XP_934532.1	ILMN_1703642	0000130615	S	124	ACCCACGGTGCGTTACAGTTCTTAAAGATGCCTCGGCGCCCACTCTGGCT	4	-	142746425-142746445:142757126-142757154		PREDICTED: Homo sapiens hypothetical protein LOC646515 (LOC646515), mRNA.					
Homo sapiens	RefSeq	NM_000907.2	ILMN_12253	NPR2	NM_003995.3	NM_003995.3		4882	73915098	NM_003995.3	NPR2	NP_003986.2	ILMN_1808898	0002810372	A	2986	GCGCTGAAGATCCATGTCTCCTCTACCACCAAGGATGCCCTAGATGAGCT	9	+	35795892-35795941	9p13.3a	Homo sapiens natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B) (NPR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1327579] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue [goid 9190] [evidence IEA]; The chemical reactions and pathways resulting in the formation of cyclic GMP, guanosine 3',5'-phosphate [goid 6182] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 1327579] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [pmid 10082481] [evidence TAS]	Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA];  [goid 16849] [evidence IEA]; Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate [goid 4383] [evidence IEA]; Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP [goid 4672] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle [goid 4888] [pmid 1327579] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Combining with an extracellular or intracellular peptide to initiate a G-protein mediated change in cell activity. A G-protein is a signal transduction molecule that alternates between an inactive GDP-bound and an active GTP-bound state [goid 8528] [evidence IEA];  [goid 16941] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [evidence IEA]	GUC2B; NPRBi; ANPRB; GUCY2B; AMDM; NPRB	GUC2B; NPRBi; ANPRB; GUCY2B; AMDM; NPRB
Homo sapiens	RefSeq	NM_022916.3	ILMN_178457	VPS33A	NM_022916.4	NM_022916.4		65082	91206458	NM_022916.4	VPS33A	NP_075067.2	ILMN_1662316	0007510541	S	1749	CTGATATTTTTCCTTGGGGGCGTAACCTTCGCTGAAATTGCTGCCCTGCG	12	-	122716898-122716947	12q24.31c	Homo sapiens vacuolar protein sorting 33 homolog A (S. cerevisiae) (VPS33A), mRNA.	The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis [goid 6904] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The process by which platelets bud from long processes extended by megakaryocytes [goid 30220] [evidence IEA]; Any process that modulates the frequency, rate or extent of the deposition of coloring matter occurring during development [goid 48070] [evidence IEA]		FLJ23187; FLJ22395	FLJ23187; FLJ22395
Homo sapiens	RefSeq	NM_001009552.1	ILMN_22922	PPP2CB	NM_001009552.1	NM_001009552.1		5516	57222564	NM_001009552.1	PPP2CB	NP_001009552.1	ILMN_1675693	0000270296	I	259	CGGCCGCCCTACCCGGCTCAGTCCTCCCCCTGTGGGACCTGGCGACGGCG	8	-	30789586-30789635	8p12e	Homo sapiens protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform (PPP2CB), transcript variant 2, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [pmid 8206937] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [pmid 2849765] [evidence TAS]	Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [pmid 8206937] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	PP2CB	PP2CB
Homo sapiens	RefSeq	NM_177539.1	ILMN_5314	TAS1R1	NM_177539.1	NM_177539.1		80835	29294616	NM_177539.1	TAS1R1	NP_803883.1	ILMN_2324776	0001090064	A	2321	GCCTAGACCAGGCTCCGGGCTGCCAATAAAGAAGTGAAATGCGTAAAAAA	1	+	6562360-6562404:6615434-6615438	1p36.31a	Homo sapiens taste receptor, type 1, member 1 (TAS1R1), transcript variant 1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 11917125] [evidence IC ]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The series of events required to receive an umami taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. Umami taste is the savory taste of meats and other foods that are rich in glutamates [goid 50917] [pmid 11917125] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with soluble compounds to initiate a change in cell activity. These receptors are responsible for the sense of taste [goid 8527] [pmid 11917125] [evidence IDA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 11917125] [evidence NAS]	T1R1; GPR70; TR1; gm148	T1R1; gm148; GPR70; TR1
Homo sapiens	RefSeq	NM_001098718.1	ILMN_307916	FAM74A3	NM_001098718.1	NM_001098718.1		728495	148887500	NM_001098718.1	FAM74A3	NP_001092188.1	ILMN_3237074	0006020639	S	439	TCAGACGCTGTCTGCAAGAAGACGTGCAGAGAGTTCAGAGGCTGTCCCGG	9	+	40706100-40706149	9p12b	Homo sapiens family with sequence similarity 74, member A3 (FAM74A3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]				
Homo sapiens	RefSeq	NM_174918.1	ILMN_181903	C19ORF59	NM_174918.2	NM_174918.2		199675	109698610	NM_174918.2	C19orf59	NP_777578.2	ILMN_1762713	0001070367	S	1123	CTCCGTACATGTGGGTGTCGCCATGTGTGCCCTGTCACTATCTGTGGCTG	19	+	7650534-7650583	19p13.2e	Homo sapiens chromosome 19 open reading frame 59 (C19orf59), mRNA.				MGC132456; MCEMP1	
Homo sapiens	RefSeq	NR_026557.1	ILMN_370747	PLK5P	NR_026557.1	NR_026557.1		126520	219521931	NR_026557.1	PLK5P		ILMN_3240611	0006250634	S	1832	CACACGGGAGGTGGGTTCTTGCCTTGTGGCATGACTGTTCAACCCAGACT	19	+	1535359-1535408	19p13.3h	Homo sapiens polo-like kinase 5 pseudogene (PLK5P), non-coding RNA.					
Homo sapiens	RefSeq	NM_005168.3	ILMN_9096	RND3	NM_005168.3	NM_005168.3		390	56676394	NM_005168.3	RND3	NP_005159.1	ILMN_1759513	0004210524	S	2287	GAAGTGTTGAAGCTGTGCTCCCCTTAAATCGTGGCAGGAGAGATTAAGGT	2	-	151325055-151325104	2q23.3a	Homo sapiens Rho family GTPase 3 (RND3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9531558] [evidence TAS]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins [goid 30036] [pmid 9531558] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: GTP + H2O = GDP + phosphate [goid 3924] [pmid 8649376] [evidence TAS]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [pmid 8649376] [evidence TAS]	RhoE; Rho8; memB; ARHE	RhoE; Rho8; memB; ARHE
Homo sapiens	RefSeq	XR_018123.2	ILMN_164868	LOC440487	XR_018123.2	XR_018123.2		440487	169213135	XR_018123.2	LOC440487		ILMN_3278132	0000580367	M	128	AGGGAATGTGTACTGTCCAAAAAGGAATGCCCCACAAGTGTTACCTTGGC				18q11.1d	PREDICTED: Homo sapiens hypothetical LOC440487 (LOC440487), mRNA.					
Homo sapiens	RefSeq	NM_080833.1	ILMN_17070	C20ORF151	NM_080833.1	NM_080833.1		140893	24308393	NM_080833.1	C20orf151	NP_543023.1	ILMN_1682863	0003870079	S	2685	TGACAGCAAACAGATGTCTGGCAGTGAGGGTGGAGGGAGACAGTGGGCGG	20	-	60985351-60985400	20q13.33c	Homo sapiens chromosome 20 open reading frame 151 (C20orf151), mRNA.				dJ908M14.3	dJ908M14.3
Homo sapiens	RefSeq	NM_018687.3	ILMN_19905	LOC55908	NM_018687.3	NM_018687.3		55908	33667073	NM_018687.3	LOC55908	NP_061157.2	ILMN_1764714	0001430689	S	1101	GCAGAGACAGACGCAGGCGGGGACAAAGGCAGAGGATGTAGCCCCATTGG	19	+	11213497-11213546	19p13.2b	Homo sapiens hepatocellular carcinoma-associated gene TD26 (LOC55908), mRNA.				PRO1185; PVPA599	PRO1185; PVPA599
Homo sapiens	RefSeq	XM_001715289.1	ILMN_343198	FAM86B2	XM_001715289.1	XM_001715289.1		653333	169173172	XM_001715289.1	FAM86B2	XP_001715341.1	ILMN_3262462	0004180072	M	871	CCTCTCATTAGAGGCAGACATCACTGGCAACTTAGCCCCAGGGTGACAGT				8p23.1a	PREDICTED: Homo sapiens family with sequence similarity 86, member B2 (FAM86B2), mRNA.					
Homo sapiens	RefSeq	XM_001715289.1	ILMN_343198	FAM86B2	XM_001715289.1	XM_001715289.1		653333	169173172	XM_001715289.1	FAM86B2	XP_001715341.1	ILMN_3186004	0002760600	A	870	GCCTCTCATTAGAGGCAGACATCACTGGCAACTTAGCCCCAGGGTGACAG				8p23.1a	PREDICTED: Homo sapiens family with sequence similarity 86, member B2 (FAM86B2), mRNA.					
Homo sapiens	RefSeq	NM_021186.2	ILMN_3954	ZP4	NM_021186.2	NM_021186.2		57829	23397679	NM_021186.2	ZP4	NP_067009.1	ILMN_1711662	0007400392	S	1447	GGCCCCATGATTCTACTCCAAGCCACTAAGGACCCTCCAGAAAAGCTCCG	1	-	238045848-238045849:238046042-238046089	1q43b	Homo sapiens zona pellucida glycoprotein 4 (ZP4), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane [goid 43231] [pmid 18029348] [evidence IDA]	The union of male and female gametes to form a zygote [goid 7338] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with acrosin, a protein that is found in the acrosomes of sperm and possesses protease and carbohydrate binding activities [goid 32190] [pmid 15950651] [evidence IPI]	ZBP; ZPB; ZP1	ZBP; ZPB; ZP1
Homo sapiens	RefSeq	NM_172002.3	ILMN_29188	HSCB	NM_172002.3	NM_172002.3		150274	50301233	NM_172002.3	HSCB	NP_741999.3	ILMN_2184789	0002030433	S	954	ACTTGGTAGGCCGAGGCAGGAGAATCGCTTAAACCCGTGAGGTGGAGGTT	22	+	27483362-27483411	22q12.1c	Homo sapiens HscB iron-sulfur cluster co-chaperone homolog (E. coli) (HSCB), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12938016] [evidence IEP]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	JAC1; MGC74462; dJ366L4.2; MGC2637; HSC20; DNAJC20	JAC1; MGC74462; dJ366L4.2; MGC2637; HSC20; DNAJC20
Homo sapiens	RefSeq	NM_172002.3	ILMN_29188	HSCB	NM_172002.3	NM_172002.3		150274	50301233	NM_172002.3	HSCB	NP_741999.3	ILMN_1771921	0006400300	S	404	GACCCTGGTGAATGATGCCTATAAGACCCTCCTGGCCCCCCTGAGCAGAG	22	+	27470632-27470681	22q12.1c	Homo sapiens HscB iron-sulfur cluster co-chaperone homolog (E. coli) (HSCB), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12938016] [evidence IEP]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	JAC1; MGC74462; dJ366L4.2; MGC2637; HSC20; DNAJC20	JAC1; MGC74462; dJ366L4.2; MGC2637; HSC20; DNAJC20
Homo sapiens	RefSeq	NM_015932.2	ILMN_7002	POMP	NM_015932.3	NM_015932.3		51371	142380233	NM_015932.3	POMP	NP_057016.1	ILMN_1693287	0001030010	S	429	GATCCATCACAAAGCGAAGTCATGGGAGAGCCACACTTGATGGTGGAATA	13	+	28144569-28144569:28150172-28150220	13q12.3a	Homo sapiens proteasome maturation protein (POMP), mRNA.				UMP1; HSPC014; PNAS-110; C13orf12	UMP1; HSPC014; PNAS-110; C13orf12
Homo sapiens	Unigene	Hs.98462	ILMN_74503	HS.98462	Hs.98462		Hs.98462		27825397	BX092639			ILMN_1855230	0002190041	S	643	CTCTAGGGGATGGAGGGGGGAGTGGGTTATTTGCACCATGTTCTAAGTTC	3	-	142430003-142430034:142430036-142430039:142430042-142430055		BX092639 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998I031864 ; IMAGE:758090, mRNA sequence					
Homo sapiens	RefSeq	NM_013961.1	ILMN_3748	NRG1	NM_013962.2	NM_013962.2		3084	116006966	NM_013962.2	NRG1	NP_039256.2	ILMN_1737252	0001940128	A	1285	CTACATCCACCACTGGGACAAGCCATCTTGTAAAATGTGCGGAGAAGGAG	8	+	31617116-31617165	8p12d	Homo sapiens neuregulin 1 (NRG1), transcript variant GGF2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1348215] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8096067] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1350381] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11389077] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 12646923] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 12646923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9553078] [evidence IDA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [pmid 17432114] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 7514177] [evidence IDA]; Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [pmid 9553078] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 17432114] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11389077] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [pmid 17432114] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15073182] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [pmid 9553078] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [pmid 17432114] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 12646923] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 16412517] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 16412517] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 10559227] [evidence IDA]; The disaggregation of a protein complex into its constituent components, occurring at the level of an individual cell. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups [goid 43624] [pmid 15155732] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 7556068] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a substance from a cell or group of cells [goid 51048] [pmid 10559227] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [pmid 9553078] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [pmid 9553078] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [pmid 10372964] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 15073182] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 11389077] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8096067] [evidence NAS]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [pmid 7556068] [evidence IDA];  [goid 30297] [pmid 9553078] [evidence IC ];  [goid 30297] [pmid 1348215] [evidence NAS];  [goid 30297] [pmid 1350381] [evidence NAS]; Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [pmid 1348215] [evidence NAS]; Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [pmid 1350381] [evidence NAS]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 7556068] [evidence IDA]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 11389077] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 10372964] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	HRG; GGF2; HGL; GGF; NDF; HRGA; HRG1; SMDF; ARIA	HRG; GGF2; HGL; GGF; NDF; HRGA; HRG1; SMDF; ARIA
Homo sapiens	RefSeq	NM_013962.2	ILMN_3748	NRG1	NM_013962.2	NM_013962.2		3084	116006966	NM_013962.2	NRG1	NP_039256.2	ILMN_2298888	0005900767	I	465	CGCGCCGCGGTGGTGATCGAGGGAAAGGTGCACCCGCAGCGGCGGCAGCA	8	+	31497732-31497781	8p12d	Homo sapiens neuregulin 1 (NRG1), transcript variant GGF2, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1348215] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8096067] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1350381] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11389077] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 12646923] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 12646923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9553078] [evidence IDA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [pmid 17432114] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 7514177] [evidence IDA]; Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [pmid 9553078] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 17432114] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11389077] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [pmid 17432114] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15073182] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [pmid 9553078] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [pmid 17432114] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 12646923] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 16412517] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 16412517] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 10559227] [evidence IDA]; The disaggregation of a protein complex into its constituent components, occurring at the level of an individual cell. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups [goid 43624] [pmid 15155732] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 7556068] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a substance from a cell or group of cells [goid 51048] [pmid 10559227] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [pmid 9553078] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [pmid 9553078] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [pmid 10372964] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 15073182] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 11389077] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8096067] [evidence NAS]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [pmid 7556068] [evidence IDA];  [goid 30297] [pmid 9553078] [evidence IC ];  [goid 30297] [pmid 1348215] [evidence NAS];  [goid 30297] [pmid 1350381] [evidence NAS]; Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [pmid 1348215] [evidence NAS]; Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [pmid 1350381] [evidence NAS]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 7556068] [evidence IDA]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 11389077] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 10372964] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	HRG; GGF2; HGL; GGF; NDF; HRGA; HRG1; SMDF; ARIA	HRG; GGF2; HGL; GGF; NDF; HRGA; HRG1; SMDF; ARIA
Homo sapiens	RefSeq	XM_944774.1	ILMN_43166	LOC651577	XM_944774.1	XM_944774.1		651577	89037857	XM_944774.1	LOC651577	XP_949867.1	ILMN_1662538	0002760215	S	1	ATGGGCTCTTGCCCTGGGCCCAGGGTGCTCCTGTGCGGGCTGCTGCTCAT					PREDICTED: Homo sapiens hypothetical protein LOC651577 (LOC651577), mRNA.					
Homo sapiens	RefSeq	XM_943036.1	ILMN_45432	LOC647810	XM_943036.1	XM_943036.1		647810	89038831	XM_943036.1	LOC647810	XP_948129.1	ILMN_1738497	0006550296	S	474	CCTAAGAGGGTGGCCAGAGACAGTGTCTTGTCATGACATCAGAAGCCCCA					PREDICTED: Homo sapiens hypothetical protein LOC647810 (LOC647810), mRNA.					
Homo sapiens	RefSeq	NM_173526.1	ILMN_44300	FAM71D	NM_173526.2	NM_173526.2		161142	89363023	NM_173526.2	FAM71D	NP_775797.2	ILMN_1798547	0005890673	S	1477	TCCTCAAACTTGTGCCTCATCTGTCTGCCCCTTTCTCAAGGGAATGAATG	14	+	66761621-66761667:66761668-66761670	14q23.3b	Homo sapiens family with sequence similarity 71, member D (FAM71D), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]			FLJ36130; C14orf54	FLJ36130
Homo sapiens	RefSeq	NM_031209.1	ILMN_10992	QTRT1	NM_031209.1	NM_031209.1		81890	13654275	NM_031209.1	QTRT1	NP_112486.1	ILMN_1780153	0002100563	S	903	GCAGTTGAGGAAGAAGGTGTTTGAGAAGGACTTCGGCCCCATAGACCCGG	19	+	10684469-10684518	19p13.2b	Homo sapiens queuine tRNA-ribosyltransferase 1 (QTRT1), mRNA.	An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence NAS]	The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents [goid 8616] [pmid 11255023] [evidence NAS]; The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents [goid 8616] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine [goid 8479] [pmid 11255023] [evidence TAS]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: tRNA guanine + queuine = tRNA queuine + guanine [goid 8479] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FP3235; TGT	FP3235; TGT
Homo sapiens	RefSeq	NM_181676.1	ILMN_1007	PPP2R2B	NM_181676.1	NM_181676.1		5521	32307116	NM_181676.1	PPP2R2B	NP_858062.1	ILMN_2360202	0001990019	A	1263	TCTTCAGGATGTTCGACAGAAACACCAAGCGTGATGTGACCCTTGAGGCT	5	-	145949903-145949952	5q32d-q32e	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B, beta isoform (PPP2R2B), transcript variant 4, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 1849734] [evidence TAS]	PR2AB-BETA; PR52B; PR2APR55-BETA; PR2AB55-BETA; MGC24888; PR55-BETA; PP2A-PR55B; SCA12	PR2AB-BETA; PR52B; PR2APR55-BETA; PR2AB55-BETA; MGC24888; PR55-BETA; PP2A-PR55B; SCA12
Homo sapiens	RefSeq	NM_181676.1	ILMN_1007	PPP2R2B	NM_181676.1	NM_181676.1		5521	32307116	NM_181676.1	PPP2R2B	NP_858062.1	ILMN_1660732	0006020523	A	1788	GCCCAGTTTTCTCTGGTGGGTCCAGTGTTTTGTTCCTAGGTGTCTGCTGC	5	-	145949378-145949427	5q32d-q32e	Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B, beta isoform (PPP2R2B), transcript variant 4, mRNA.	A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]; A heterodimer with protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic and regulatory subunits [goid 159] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [evidence IEA]; Modulation of the activity of the enzyme protein phosphatase type 2A [goid 8601] [pmid 1849734] [evidence TAS]	PR2AB-BETA; PR52B; PR2APR55-BETA; PR2AB55-BETA; MGC24888; PR55-BETA; PP2A-PR55B; SCA12	PR2AB-BETA; PR52B; PR2APR55-BETA; PR2AB55-BETA; MGC24888; PR55-BETA; PP2A-PR55B; SCA12
Homo sapiens	RefSeq	NM_001011649.1	ILMN_3896	CDK5RAP2	NM_001011649.1	NM_001011649.1		55755	58535452	NM_001011649.1	CDK5RAP2	NP_001011649.1	ILMN_2415529	0004260017	A	5240	CTGGGAACAAAGGGTCCACACCCAGCACCACTGAGCAAGTTTGTGAGCAG	9	-	123163125-123163163:123165084-123165094	9q33.2a	Homo sapiens CDK5 regulatory subunit associated protein 2 (CDK5RAP2), transcript variant 2, mRNA.	A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle [goid 5813] [pmid 14654843] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 10721722] [evidence NAS]	The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10915792] [evidence NAS]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [pmid 10721722] [evidence NAS]	Interacting selectively with microtubules, filaments composed of tubulin monomers [goid 8017] [pmid 14654843] [evidence IDA]; Interacting selectively with neuronal Cdc2-like kinase, an enzyme involved in the regulation of neuronal differentiation and neuro-cytoskeleton dynamics [goid 42808] [pmid 10721722] [evidence IPI]	MCPH3; DKFZp686D1070; Cep215; KIAA1633; C48; DKFZp686B1070	MCPH3; DKFZp686D1070; Cep215; KIAA1633; C48; DKFZp686B1070
Homo sapiens	RefSeq	NM_021105.1	ILMN_4441	PLSCR1	NM_021105.1	NM_021105.1		5359	10863876	NM_021105.1	PLSCR1	NP_066928.1	ILMN_1745242	0003890609	S	422	CCTGGCCCAGCTGGCTTTCCTGTCCCAAATCAGCCAGTGTATAATCAGCC	3	-	147729187-147729236	3q24d	Homo sapiens phospholipid scramblase 1 (PLSCR1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9218461] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]; The process by which all major lipid classes are redistributed within the plasma membrane following cell activation or injury, resulting in surface exposure of phosphatidylserine (PS) and phosphatidylethanolamine (PE). Cell surface-exposed PS can serve as receptor sites for coagulation enzyme complexes, and contributes to cell clearance by the reticuloendothelial system [goid 17121] [pmid 9218461] [evidence TAS]; A series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue. These events include shape change, adhesiveness, aggregation, and release reactions. When carried through to completion, these events lead to the formation of a stable hemostatic plug [goid 30168] [pmid 9218461] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 9218461] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA];  [goid 17128] [pmid 9218461] [evidence TAS]	MMTRA1B	MMTRA1B
Homo sapiens	RefSeq	NM_012315.1	ILMN_1186	KLK9	NM_012315.1	NM_012315.1		284366	29366811	NM_012315.1	KLK9	NP_036447.1	ILMN_2124425	0003840240	S	1123	TGGCTCCGCCCCAAGGAACCACTTACACAAAATAGCTCCGCCCCTCGGAA	19	-	56197846-56197895	19q13.33d	Homo sapiens kallikrein-related peptidase 9 (KLK9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence NAS]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence NAS]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 11054574] [evidence NAS]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 10675891] [evidence NAS]	KLKL3; KLK8; KLK-L3	KLKL3; KLK8; KLK-L3
Homo sapiens	RefSeq	NM_003715.1	ILMN_23419	USO1	NM_003715.2	NM_003715.2		8615	119220582	NM_003715.2	USO1	NP_003706.1	ILMN_1692121	0000110669	S	3629	GCTGCATTCCATACCTCAGTGAAGAAGCCGAAGGATGCTGACACACAGTG	4	+	76735132-76735181	4q21.1a	Homo sapiens USO1 homolog, vesicle docking protein (yeast) (USO1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [pmid 9478999] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence IEA]; The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi [goid 48280] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Enables the directed movement of proteins into, out of, within or between cells [goid 8565] [evidence IEA]	P115; VDP; TAP	P115; TAP
Homo sapiens	RefSeq	XM_927761.1	ILMN_43343	LOC644655	XM_927761.1	XM_927761.1		644655	88943059	XM_927761.1	LOC644655	XP_932854.1	ILMN_1664353	0005820296	S	2381	GGCTATTCTAGTGGAAAACTGTACACAATTTCCCATGAGGCTGGTGAAGG	1	-	143035050-143035099		PREDICTED: Homo sapiens similar to poly (ADP-ribose) polymerase family, member 8 (LOC644655), mRNA.					
Homo sapiens	RefSeq	NM_002566.4	ILMN_12237	P2RY11	NM_002566.4	NM_002566.4		5032	52485986	NM_002566.4	P2RY11	NP_002557.2	ILMN_1752226	0003930379	S	1882	AGGGACCCCAGGCACAAGAGCTGCCACCCCTCTGCCCGGTTTTGGAAAAA	19	+	10086970-10087019	19p13.2c	Homo sapiens purinergic receptor P2Y, G-protein coupled, 11 (P2RY11), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9405388] [evidence TAS]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [pmid 9405388] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that initiates the activity of the inactive enzyme adenylate cyclase [goid 7190] [pmid 9405388] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 9405388] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [pmid 9405388] [evidence TAS]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y11	P2Y11
Homo sapiens	RefSeq	XM_001719793.1	ILMN_344626	LOC100128084	XM_001719793.1	XM_001719793.1		100128084	169167254	XM_001719793.1	LOC100128084	XP_001719845.1	ILMN_3187612	0004280309	A	1490	ATTAGCTGGGCGTGGTGACATGCGCCTGTAATTCCAGCTACTCGGGAGGC				4p16.3d	PREDICTED: Homo sapiens hypothetical protein LOC100128084 (LOC100128084), mRNA.					
Homo sapiens	RefSeq	NM_170773.1	ILMN_137091	RASSF2	NM_170773.1	NM_170773.1		9770	25777674	NM_170773.1	RASSF2	NP_739579.1	ILMN_1799259	0006660731	I	178	TCTGTCAGAGTCAGCCAAGCGAGATCAGCCAGGGGTCTGCTCCCTGCAGA	20	-	4723923-4723972	20p13a	Homo sapiens Ras association (RalGDS/AF-6) domain family 2 (RASSF2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12732644] [evidence IPI]	DKFZp781O1747; KIAA0168	DKFZp781O1747; KIAA0168
Homo sapiens	RefSeq	NM_170773.1	ILMN_137091	RASSF2	NM_170773.1	NM_170773.1		9770	25777674	NM_170773.1	RASSF2	NP_739579.1	ILMN_1709683	0005390095	A	5074	GATGCGTTTACTCATCTAACATAATCTGACAGGGCCTCAGCAAGGGAGCC	20	-	4708746-4708795	20p13a	Homo sapiens Ras association (RalGDS/AF-6) domain family 2 (RASSF2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12732644] [evidence IPI]	DKFZp781O1747; KIAA0168	DKFZp781O1747; KIAA0168
Homo sapiens	RefSeq	XM_929547.1	ILMN_43725	LOC643774	XM_929547.1	XM_929547.1		643774	88942617	XM_929547.1	LOC643774	XP_934640.1	ILMN_1790190	0002340678	S	831	TACCTGTGGAACCCAGAAGGGAGCAGGGGTCGGGCTAGAGACACCGCAAT	1	-	43479675-43479724		PREDICTED: Homo sapiens hypothetical protein LOC643774 (LOC643774), mRNA.					
Homo sapiens	RefSeq	NM_021636.2	ILMN_12194	LGR6	NM_021636.2	NM_021636.2		59352	62912471	NM_021636.2	LGR6	NP_067649.2	ILMN_1703081	0001240546	I	5	AGGCGGTTGTGGTGCAAAGGAAAACCCACAGGCCAAGGAATGGGAAGACC	1	+	200439532-200439570:200439571-200439581	1q32.1d	Homo sapiens leucine-rich repeat-containing G protein-coupled receptor 6 (LGR6), transcript variant 2, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with a protein hormone to initiate a change in cell activity [goid 16500] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	VTS20631; GPCR; FLJ14471	VTS20631; GPCR; FLJ14471
Homo sapiens	RefSeq	XM_001722758.1	ILMN_343717	LOC100129195	XM_001722758.1	XM_001722758.1		100129195	169169522	XM_001722758.1	LOC100129195	XP_001722810.1	ILMN_3263099	0005810494	M	4070	GCTCACACAAAGCCTGTTGGTGGACTCTCTTCACACAGACTCACTTGACA	6	-	28197978-28198027	6p22.1b	PREDICTED: Homo sapiens hypothetical protein LOC100129195 (LOC100129195), mRNA.					
Homo sapiens	RefSeq	NM_004462.3	ILMN_173499	FDFT1	NM_004462.3	NM_004462.3		2222	67089146	NM_004462.3	FDFT1	NP_004453.3	ILMN_2144088	0005700142	S	1649	GCAGAGCATTCAGTGCCACGGTTTAGGTGAAGTCGCTGCATATGTGACTG	8	+	11696361-11696410	8p23.1a	Homo sapiens farnesyl-diphosphate farnesyltransferase 1 (FDFT1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [pmid 10896663] [evidence EXP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 8474436] [evidence TAS]	The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, the principal sterol of vertebrates and the precursor of many steroids, including bile acids and steroid hormones [goid 6695] [evidence IEA]; The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues [goid 8299] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: 2 farnesyl diphosphate = diphosphate + presqualene diphosphate [goid 4310] [evidence IEA]; Catalysis of the reaction: 2 farnesyl diphosphate = diphosphate + presqualene diphosphate [goid 4310] [pmid 10896663] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SS; DGPT; SQS; ERG9	SS; DGPT; SQS; ERG9
Homo sapiens	RefSeq	NM_022742.2	ILMN_183005	CCDC136	NM_022742.3	NM_022742.3		64753	115511011	NM_022742.3	CCDC136	NP_073579.3	ILMN_1706935	0007100364	S	4076	CAGGCTGAAAAGGCTTGTGGGGAGCGGCTGACTTCCATCTCCTGCCTTGT	7	+	128249327-128249376	7q32.1a	Homo sapiens coiled-coil domain containing 136 (CCDC136), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15231747] [evidence IPI]	MGC176632; DKFZP434G156; MGC129657; NAG6	DKFZP434G156
Homo sapiens	RefSeq	NM_001080519.2	ILMN_356937	BAHCC1	NM_001080519.2	NM_001080519.2		57597	169658366	NM_001080519.2	BAHCC1	NP_001073988.2	ILMN_3242544	0002570524	S	9913	GAGGCTCGGGGATCAGAACGATGTCAAGTGAAGAAAAATGCACGGGGGCA	17	+	79433096-79433145	17q25.3f	Homo sapiens BAH domain and coiled-coil containing 1 (BAHCC1), mRNA.			Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]		
Homo sapiens	RefSeq	NM_032527.2	ILMN_23696	ZGPAT	NM_032527.3	NM_032527.3		84619	133925792	NM_032527.3	ZGPAT	NP_115916.3	ILMN_1794643	0005490390	A	1881	GACACTGCTGAGTGGAGACAGAGCTGCGGGGTCCCATCTGGACACTTACT	20	+	61837822-61837871	20q13.33e	Homo sapiens zinc finger, CCCH-type with G patch domain (ZGPAT), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZC3H9; ZC3HDC9; RP4-583P15.3; GPATC6; MGC44880; KIAA1847; GPATCH6	RP4-583P15.3; GPATC6; ZC3H9; ZC3HDC9; MGC44880; KIAA1847; GPATCH6
Homo sapiens	RefSeq	NM_004988.3	ILMN_177427	MAGEA1	NM_004988.3	NM_004988.3		4100	29029615	NM_004988.3	MAGEA1	NP_004979.2	ILMN_2181593	0006370754	S	1236	GCGGTCAGTGTTCTCAGTAGTAGGTTTCTGTTCTATTGGGTGACTTGGAG	X	-	152135106-152135155	Xq28f	Homo sapiens melanoma antigen family A, 1 (directs expression of antigen MZ2-E) (MAGEA1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1840703] [evidence TAS]			MGC9326; MAGE1	MGC9326; MAGE1
Homo sapiens	RefSeq	NM_025151.3	ILMN_3988	RAB11FIP1	NM_025151.3	NM_025151.3		80223	50363227	NM_025151.3	RAB11FIP1	NP_079427.3	ILMN_2409596	0004050102	A	3852	CTCTCCTAGGGGAAGAATATCACAGGCTAATAGCGTGGTTGGGGGTGAAG	8	-	37837663-37837712	8p12a	Homo sapiens RAB11 family interacting protein 1 (class I) (RAB11FIP1), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; Organelle consisting of networks of 60nm tubules organized around the microtubule organizing centre in some cell types. They transport receptors from late endosomes back to the plasma membrane for recycling and are also involved in membrane trafficking [goid 55037] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	FLJ22622; DKFZp686E2214; rab11-FIP1; RCP; NOEL1A; MGC78448; FLJ22524	FLJ22622; DKFZp686E2214; rab11-FIP1; RCP; NOEL1A; MGC78448; FLJ22524
Homo sapiens	RefSeq	NM_176800.1	ILMN_138798	PRPF4B	NM_176800.1	NM_176800.1		8899	28872758	NM_176800.1	PRPF4B	NP_789770.1	ILMN_1737124	0002810678	A	3829	GGTGCAGCTCAGTGGAAGATGATGACAACCAGAAGACATGAGCTAAGGGT	6	+	4007866-4007866:4008307-4008352:4010034-4010036	6p25.2a	Homo sapiens PRP4 pre-mRNA processing factor 4 homolog B (yeast) (PRPF4B), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide [goid 6397] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 9102632] [evidence TAS]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9102632] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15452250] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17513757] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17620599] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PR4H; dJ1013A10.1; PRP4; KIAA0536; PRP4H; PRP4K	PR4H; dJ1013A10.1; PRP4; KIAA0536; PRP4H; PRP4K
Homo sapiens	RefSeq	XR_037540.1	ILMN_347640	LOC100132310	XR_037540.1	XR_037540.1		100132310	169171545	XR_037540.1	LOC100132310		ILMN_3290288	0006370608	M	269	TTCCATTAAAGCCAAACCAGACTTAGTGCAGTCAATGACGGACTGTCTGT				7q34b	PREDICTED: Homo sapiens misc_RNA (LOC100132310), miscRNA.					
Homo sapiens	RefSeq	XM_932782.1	ILMN_43877	LOC645276	XM_944209.1	XM_944209.1		645276	89031815	XM_944209.1	LOC645276	XP_949302.1	ILMN_1653276	0002370541	S	228	GGAACGGTGCGGCCAACTCGCGGGGGCGAGCCCGGAGCCGGCGGAGACCG				10p12.31a	PREDICTED: Homo sapiens hypothetical LOC645276 (LOC645276), mRNA.					
Homo sapiens	RefSeq	NM_000480.2	ILMN_13998	AMPD3	NM_000480.2	NM_000480.2		272	70906424	NM_000480.2	AMPD3	NP_000471.1	ILMN_1660854	0000990576	I	288	CTCTGCCCAGCGCGTCCCCTTTGCTCCAGCCCTGCGGCCGTCCCTTTCGG	11	+	10429087-10429136	11p15.4a	Homo sapiens adenosine monophosphate deaminase (isoform E) (AMPD3), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of AMP, adenosine monophosphate [goid 6196] [pmid 9291127] [evidence TAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [pmid 9291127] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	NM_001025389.1	ILMN_13998	AMPD3	NM_000480.2	NM_000480.2		272	70906424	NM_000480.2	AMPD3	NP_000471.1	ILMN_1774447	0000150504	A	4116	GCCTGTCCCCTCCACTGGTCAATTCAGCATATGGAAGTATAAATGCAGTC	11	+	10484854-10484903	11p15.4a	Homo sapiens adenosine monophosphate deaminase (isoform E) (AMPD3), transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of AMP, adenosine monophosphate [goid 6196] [pmid 9291127] [evidence TAS]; The chemical reactions and pathways involving a nucleotide, a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic nucleotides (nucleoside cyclic phosphates) [goid 9117] [evidence IEA]; The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a glycosamine consisting of a purine base linked to a ribose sugar esterified with phosphate on its glycose moiety [goid 9168] [evidence IEA]	Catalysis of the reaction: AMP + H2O = IMP + NH3 [goid 3876] [pmid 9291127] [evidence TAS]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		
Homo sapiens	RefSeq	XM_001721121.1	ILMN_344258	LOC100130887	XM_001721121.1	XM_001721121.1		100130887	169201742	XM_001721121.1	LOC100130887	XP_001721173.1	ILMN_3187238	0005220603	A	279	GGCCGGTGCTTCCCACAGCTGTGCGTTATCAGCCCCATTTCACAGTTTGC				10q26.13a	PREDICTED: Homo sapiens hypothetical protein LOC100130887 (LOC100130887), mRNA.					
Homo sapiens	RefSeq	NM_012377.1	ILMN_16831	OR7C2	NM_012377.1	NM_012377.1		26658	13624324	NM_012377.1	OR7C2	NP_036509.1	ILMN_1795018	0005220025	S	905	GACTCCTCCTCAGGGCAACGTCTCTCAAAGAGGGGACCATTGCTAAGCTC	19	+	14914205-14914254	19p13.12b	Homo sapiens olfactory receptor, family 7, subfamily C, member 2 (OR7C2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR7C3; CIT-HSP-87M17; OR19-18	OR7C3; CIT-HSP-87M17; OR19-18
Homo sapiens	RefSeq	NM_032907.3	ILMN_17890	UBL7	NM_032907.3	NM_032907.3		84993	41152105	NM_032907.3	UBL7	NP_116296.1	ILMN_1653646	0001240307	I	81	TGGGCAGCGCGGGCTCGATGTGTGTCAGCCAAGTAGCTGGTCCCACTGGA	15	-	74753380-74753429	15q24.1b	Homo sapiens ubiquitin-like 7 (bone marrow stromal cell-derived) (UBL7), transcript variant 1, mRNA.		The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification) [goid 6464] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	TCBA1; MGC14421; BMSC-UbP	TCBA1; MGC14421; BMSC-UbP
Homo sapiens	RefSeq	XM_001133784.1	ILMN_177234	LOC729642	XM_001133784.1	XM_001133784.1		729642	113428092	XM_001133784.1	LOC729642	XP_001133784.1	ILMN_3239480	0005080438	S	582	GACCAGCATCCAGGACAACACAAAGATCTGCAATCAGAACTATTGAACTT	19	+	15806901-15806924:15807028-15807053	19p13.12a	PREDICTED: Homo sapiens hypothetical LOC729642 (LOC729642), mRNA.					
Homo sapiens	RefSeq	XM_293580.2	ILMN_24562	GPR149	NM_001038705.1	NM_001038705.1		344758	84662752	NM_001038705.1	GPR149	NP_001033794.1	ILMN_1673712	0005560612	A	2188	CAGGCAGAACAGTAAAAGGCAGCATCAAGAGAGGGATGGCTACCAGGAGG	3	-	155538240-155538289	3q25.2c	Homo sapiens G protein-coupled receptor 149 (GPR149), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	IEDA; PGR10	
Homo sapiens	RefSeq	NM_001038705.1	ILMN_24562	GPR149	NM_001038705.1	NM_001038705.1		344758	84662752	NM_001038705.1	GPR149	NP_001033794.1	ILMN_2122076	0005270056	S	1892	GGCCATGAACCAAACTCAGAAGATTCTTCATCCACGTTTGTGGACACCAG	3	-	155538536-155538585	3q25.2c	Homo sapiens G protein-coupled receptor 149 (GPR149), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]	IEDA; PGR10	IEDA; PGR10
Homo sapiens	RefSeq	NM_001822.3	ILMN_162680	CHN1	NM_001822.3	NM_001822.3		1123	68533258	NM_001822.3	CHN1	NP_001813.1	ILMN_1679638	0006480477	I	254	GCTCCCTGGGCCCGGTGCGCCCGACAATAACGCGTGAATAACTTTTTCTT	2	-	175578058-175578107	2q31.1g	Homo sapiens chimerin (chimaerin) 1 (CHN1), transcript variant 1, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8336731] [evidence TAS]; Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with diacylglycerol, a diester of glycerol and two fatty acids [goid 19992] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CHN; ARHGAP2; RHOGAP2	CHN; ARHGAP2; RHOGAP2
Homo sapiens	RefSeq	NM_173663.1	ILMN_28353	NY-REN-7	NM_173663.1	NM_173663.1		285596	28395040	NM_173663.1	NY-REN-7	NP_775934.1	ILMN_1745669	0005670376	I	1673	CCAAGAAGCACTGAAATGTGTCCAGTCCCAGGAGTCCTTCAGCCTTGGGG	5	-	177083214-177083263	5q35.3a-q35.3b	Homo sapiens NY-REN-7 antigen (NY-REN-7), mRNA.				KIAA0752	KIAA0752
Homo sapiens	RefSeq	NR_031673.1	ILMN_388599	MIR1269	NR_031673.1	NR_031673.1		100302177	269847372	NR_031673.1	MIR1269		ILMN_3308315	0002360327	S	26	TTGGCATGGCTCAGTCCAAGTCTGACCACCTGAGGAATGCCTGGACTGAG					Homo sapiens microRNA 1269 (MIR1269), microRNA.					
Homo sapiens	RefSeq	XM_942457.1	ILMN_36632	LOC652797	XM_942457.1	XM_942457.1		652797	89064519	XM_942457.1	LOC652797	XP_947550.1	ILMN_1747396	0004570730	S	1018	GTGCACACTCGCATGTTTGTATGGGAAAGCTCTGGAGGCTGTCTGATCTC					PREDICTED: Homo sapiens similar to Pyruvate kinase, isozymes M1/M2 (Pyruvate kinase muscle isozyme) (Cytosolic thyroid hormone-binding protein) (CTHBP) (THBP1) (LOC652797), mRNA.					
Homo sapiens	RefSeq	NM_014112.1	ILMN_181199	TRPS1	NM_014112.2	NM_014112.2		7227	90652850	NM_014112.2	TRPS1	NP_054831.2	ILMN_1814557	0006450484	S	9416	GGGGGTTATTTAAACTGTCAGTTCCCAAAGGCCAGGAAAGGTTGGGGTCA	8	-	116493702-116493751	8q23.3e	Homo sapiens trichorhinophalangeal syndrome I (TRPS1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10615131] [evidence TAS]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10615131] [evidence TAS]; The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane [goid 6607] [pmid 10615131] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA-dependent transcription [goid 45892] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10615131] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10615131] [evidence TAS]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC134928; GC79	GC79
Homo sapiens	RefSeq	NM_001078173.1	ILMN_169025	FAM127C	NM_001078173.1	NM_001078173.1		441518	118200336	NM_001078173.1	FAM127C	NP_001071641.1	ILMN_2106107	0006450192	S	710	GTTGCACAAAGCTGAGCTCCTGTTACACACTGACAGACCACTGACAGCCG	X	-	134155807-134155856	Xq26.3a	Homo sapiens family with sequence similarity 127, member C (FAM127C), mRNA.				CXX1c; FLJ25577; MAR8B	CXX1c; FLJ25577; MAR8B
Homo sapiens	RefSeq	NM_001078173.1	ILMN_169025	FAM127C	NM_001078173.1	NM_001078173.1		441518	118200336	NM_001078173.1	FAM127C	NP_001071641.1	ILMN_3251536	0001470368	S	75	GCGATGGAAGGTCGAGTGCAGCTGATGAAGGCCCTCCTGGCTCGGCCCCT	X	-	134156442-134156489:134156490-134156491	Xq26.3a	Homo sapiens family with sequence similarity 127, member C (FAM127C), mRNA.				CXX1c; FLJ25577; MAR8B	CXX1c; FLJ25577; MAR8B
Homo sapiens	RefSeq	NM_176799.1	ILMN_171946	ILKAP	NM_176799.1	NM_176799.1		80895	29171686	NM_176799.1	ILKAP	NP_789769.1	ILMN_1687655	0001990091	I	423	GTCGCTAGCCCTGAGAAGTACTGCGAGGAAATGTGGAGCAGTTTTCTCTG	2	-	238767963-238768005:238768006-238768012	2q37.3c	Homo sapiens integrin-linked kinase-associated serine/threonine phosphatase 2C (ILKAP), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	PP2C-DELTA; FLJ10181; MGC4846; DKFZP434J2031	PP2C-DELTA; FLJ10181; DKFZP434J2031; MGC4846
Homo sapiens	RefSeq	NM_005000.2	ILMN_175394	NDUFA5	NM_005000.2	NM_005000.2		4698	13699821	NM_005000.2	NDUFA5	NP_004991.1	ILMN_1759973	0001030392	S	1457	TGGGTATCAAAACAAGACAAATGCTGTTCAGGGAAAGAAGTTGGCAAGCT	7	-	123181126-123181175	7q31.32b	Homo sapiens NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa (NDUFA5), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor [goid 16651] [evidence IEA]	NUFM; CI-13KD-B; DKFZp781K1356; FLJ12147; B13; UQOR13	NUFM; CI-13KD-B; DKFZp781K1356; FLJ12147; B13; UQOR13
Homo sapiens	RefSeq	NM_020686.3	ILMN_163778	ABAT	NM_020686.4	NM_020686.4		18	96304477	NM_020686.4	ABAT	NP_065737.2	ILMN_1670117	0001110025	I	52	AGACACCCAGCGCTGCCGGAACTCGGGGCGCGCATCCCGCAAGTCGGAAC	16	+	8675979-8676028	16p13.2b	Homo sapiens 4-aminobutyrate aminotransferase (ABAT), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence ISS]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A homodimeric protein complex that possesses 4-aminobutyrate transaminase activity [goid 32144] [pmid 15528998] [evidence IDA]	The specific actions or reactions of an organism in response to external or internal stimuli. Patterned activity of a whole organism in a manner dependent upon some combination of that organism's internal state and external conditions [goid 7610] [pmid 11918424] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms [goid 9450] [pmid 15528998] [evidence NAS]; The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell [goid 42135] [pmid 15528998] [evidence NAS]; A change in the behavior of an organism as a result of a cocaine stimulus [goid 48148] [evidence ISS]	Catalysis of the reaction: 4-aminobutanoate + amino group acceptor = succinate semialdehyde + amino acid [goid 3867] [pmid 15528998] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6 [goid 30170] [pmid 15650327] [evidence IDA]; Interacting selectively with succinate-semialdehyde dehydrogenase [goid 32145] [evidence ISS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15528998] [evidence IPI]; Catalysis of the reaction: 2-oxoglutarate + (S)-3-amino-2-methylpropanoate = L-glutamate + methylmalonate-semialdehyde [goid 47298] [evidence IEA]	NPD009; GABAT; GABA-AT	NPD009; GABA-AT; GABAT
Homo sapiens	RefSeq	NM_001008216.1	ILMN_24444	GALE	NM_001008216.1	NM_001008216.1		2582	56118216	NM_001008216.1	GALE	NP_001008217.1	ILMN_1714157	0005690338	I	17	AGCACTTAAAGGGCCCGCGGCTCGGGCGTAGGAGGCGGTGCCTCTGCAGC	1	-	24127228-24127277	1p36.11d	Homo sapiens UDP-galactose-4-epimerase (GALE), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 15175331] [evidence EXP]	The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose [goid 6012] [evidence IEA]; The chemical reactions and pathways by which individual cells transform chemical substances [goid 44237] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: UDP-glucose = UDP-galactose [goid 3978] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: UDP-glucose = UDP-galactose [goid 3978] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: UDP-glucose = UDP-galactose [goid 3978] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: UDP-glucose = UDP-galactose [goid 3978] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: UDP-glucose = UDP-galactose [goid 3978] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]; Catalysis of the reaction: UDP-glucose = UDP-galactose [goid 3978] [pmid 15175331] [evidence TAS]; Catalysis of the reaction: UDP-glucose = UDP-galactose [goid 3978] [pmid 15175331] [evidence EXP]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]; Interacting selectively with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed [goid 50662] [evidence IEA]		
Homo sapiens	RefSeq	NM_021049.3	ILMN_163850	MAGEA5	NM_021049.3	NM_021049.3		4104	58530874	NM_021049.3	MAGEA5	NP_066387.1	ILMN_1750777	0003940070	S	1019	ACTGTGGGGTCCAAGGGCACTCGCTGCTTGAAAGTACTGGAGCACGTGGT	X	-	151283149-151283198	Xq28e	Homo sapiens melanoma antigen family A, 5 (MAGEA5), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MAGE5; MGC129526; MAGEA4	MAGE5; MAGEA4; MGC129526
Homo sapiens	RefSeq	XM_942431.1	ILMN_34296	LOC400509	XM_942431.1	XM_942431.1		400509	89077446	XM_942431.1	LOC400509	XP_947524.1	ILMN_1670371	0006180386	I	442	AGTGGGAACTGGTGCTCGAGGCGGAGCAGAGGGAATCAGAATGTGGCTGA				16p11.2d	PREDICTED: Homo sapiens similar to FLJ12363 protein (LOC400509), mRNA.					
Homo sapiens	RefSeq	NM_182623.1	ILMN_27721	FAM131C	NM_182623.1	NM_182623.1		348487	32699057	NM_182623.1	FAM131C	NP_872429.1	ILMN_1761527	0004480021	A	1196	GGAGCCATAACCCCCTCCCCCTTCATTACTTCACTCAGGTGGGCACCTTC	1	-	16257274-16257323	1p36.13f	Homo sapiens family with sequence similarity 131, member C (FAM131C), mRNA.				FLJ36766; RP11-5P18.9; C1orf117	FLJ36766; C1orf117; RP11-5P18.9
Homo sapiens	RefSeq	XM_938670.1	ILMN_27721	FAM131C	NM_182623.1	NM_182623.1		348487	32699057	NM_182623.1	FAM131C	NP_872429.1	ILMN_1812321	0007320309	A	1458	CACTTCTGGTAGCTAAGCACCTGCTCCCCGGCTCTCTTCACCCAGGACAT	1	-	16257012-16257061	1p36.13f	Homo sapiens family with sequence similarity 131, member C (FAM131C), mRNA.				FLJ36766; RP11-5P18.9; C1orf117	
Homo sapiens	RefSeq	NM_014306.2	ILMN_29042	C22ORF28	NM_014306.3	NM_014306.3		51493	142366035	NM_014306.3	C22orf28	NP_055121.1	ILMN_1795991	0005810632	S	1719	TGCAGCTGTAACTGCTCACGCCAAAATGGCTGATGGGGAGGCTGCTGCTT	22	-	31113820-31113869	22q12.3a	Homo sapiens chromosome 22 open reading frame 28 (C22orf28), mRNA.				HSPC117; RP1-149A16.6; DJ149A16.6	HSPC117; RP1-149A16.6; DJ149A16.6
Homo sapiens	RefSeq	NM_032808.5	ILMN_28172	LINGO1	NM_032808.5	NM_032808.5		84894	52145308	NM_032808.5	LINGO1	NP_116197.4	ILMN_1756755	0001660121	S	2730	ACCCCAGCCTCTGGTCCCAGCTCTGCTGCTCACTTGCTGTGTGGCCTCAA	15	-	77905521-77905570	15q24.3b	Homo sapiens leucine rich repeat and Ig domain containing 1 (LINGO1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of a neuron whose cell body is located in the central nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron [goid 21954] [evidence IEA]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IEA]; A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase B, which occurs as a result of a single trigger reaction or compound [goid 43491] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte differentiation [goid 48715] [evidence IEA]	Interacting selectively with the epidermal growth factor receptor [goid 5154] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LRRN6A; MGC17422; UNQ201; FLJ14594; LERN1	LRRN6A; MGC17422; UNQ201; FLJ14594; LERN1
Homo sapiens	RefSeq	NM_001044264.1	ILMN_168723	MSMP	NM_001044264.1	NM_001044264.1		692094	112984107	NM_001044264.1	MSMP	NP_001037729.1	ILMN_2115135	0003450243	S	337	GTTTCCATTGCACCTGTCTGCATCCTGTTGGCGTGGGCTGCTGTGACACG	9	-	35753276-35753277:35753657-35753704	9p13.3a	Homo sapiens microseminoprotein, prostate associated (MSMP), mRNA.					
Homo sapiens	RefSeq	NM_001001917.1	ILMN_12548	OR56A1	NM_001001917.1	NM_001001917.1		120796	50054465	NM_001001917.1	OR56A1	NP_001001917.1	ILMN_1667803	0001400338	S	795	GGTGTTGACAAACGTGGCCAGAAAGAAGGTCCCCATGGACATCCTGATCC	11	-	6048090-6048139	11p15.4c	Homo sapiens olfactory receptor, family 56, subfamily A, member 1 (OR56A1), mRNA.				OR11-75	OR11-75
Homo sapiens	RefSeq	XM_938849.1	ILMN_178905	FCGR2A	XM_001129584.1	XM_001129584.1		2212	113412423	XM_001129584.1	FCGR2A	XP_001129584.1	ILMN_1810687	0004280392	I	813	AATGGGAGAGACCCTCCCTGAGAAACCAGGTGAATACAGAGTTGTCTCAG				1q23.3a	PREDICTED: Homo sapiens Fc fragment of IgG, low affinity IIa, receptor (CD32) (FCGR2A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2139735] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17785206] [evidence IPI]; Interacting selectively with an immunoglobulin of an IgG isotype [goid 19864] [evidence IEA]		
Homo sapiens	RefSeq	NM_003857.2	ILMN_4188	GALR2	NM_003857.2	NM_003857.2		8811	8051600	NM_003857.2	GALR2	NP_003848.1	ILMN_1733847	0001510008	S	1231	GTTGATGTGGCCTGAAAGCACTTAGCGGGCGCGCTGGGATGTCACAGAGT	17	+	71585101-71585107:71585108-71585150	17q25.1d	Homo sapiens galanin receptor 2 (GALR2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9480833] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9480833] [evidence TAS]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9480833] [evidence TAS]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by modulation of adenylyl cyclase activity and a subsequent change in the concentration of cyclic AMP [goid 7188] [pmid 9685625] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 9685625] [evidence TAS]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 9832121] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 9480833] [evidence TAS]; The whole of the physical, chemical, and biochemical processes carried out by multicellular organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism [goid 7586] [pmid 9832121] [evidence TAS]; The acquisition and processing of information and/or the storage and retrieval of this information over time [goid 7611] [pmid 9480833] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [pmid 9480833] [evidence TAS]; The process whose specific outcome is the progression of the neurite over time, from its formation to the mature structure. The neurite is any process extending from a neural cell, such as axons or dendrites [goid 31175] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with galanin to initiate a change in cell activity [goid 4966] [pmid 9480833] [evidence TAS]	MGC125983; MGC125984; GALNR2	MGC125983; MGC125984; GALNR2
Homo sapiens	RefSeq	XM_001715499.1	ILMN_342585	LOC100131525	XM_001715499.1	XM_001715499.1		100131525	169178512	XM_001715499.1	LOC100131525	XP_001715551.1	ILMN_3241715	0002640152	S	1083	GCAGTGTGGCCGGAGCTCAGAGGAGAGAAAGGTTAATCCAGCAAGAGTCC					PREDICTED: Homo sapiens similar to rCG63049 (LOC100131525), mRNA.					
Homo sapiens	RefSeq	NM_198428.2	ILMN_165104	BBS9	NM_198428.2	NM_198428.2		27241	75905799	NM_198428.2	BBS9	NP_940820.1	ILMN_2352159	0003840066	A	3316	GAGGGGTTGGGACTTTTTACTTCACTAGGAGAACTTGTAACACCATGGGG	7	+	33347109-33347110:33350718-33350765	7p14.3b	Homo sapiens Bardet-Biedl syndrome 9 (BBS9), transcript variant 2, mRNA.	A protein complex that associates with the primary cilium and is involved in cilium biogenesis; consists of seven conserved proteins: BBS1, BBS2, BBS4, BBS5, BBS7, BBS8 and BBS9 [goid 34464] [pmid 17574030] [evidence IDA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The process whereby a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat [goid 45444] [evidence ISS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]		B1; PTHB1; D1; C18; MGC118917	PTHB1; C18; MGC118917; B1; D1
Homo sapiens	RefSeq	NM_030650.1	ILMN_30179	KIAA1715	NM_030650.1	NM_030650.1		80856	38176150	NM_030650.1	KIAA1715	NP_085153.1	ILMN_2055760	0004900068	S	5408	TGTCTCCAACCTTGTGCACTTGCTATCTATTCTGTGTGCTGCAGCCTGAG	2	-	176790717-176790766	2q31.1h	Homo sapiens KIAA1715 (KIAA1715), mRNA.				LNP; MGC102862; DKFZp686G1442; Ul; ulnaless	LNP; MGC102862; DKFZp686G1442; Ul; ulnaless
Homo sapiens	RefSeq	NM_030650.1	ILMN_30179	KIAA1715	NM_030650.1	NM_030650.1		80856	38176150	NM_030650.1	KIAA1715	NP_085153.1	ILMN_1695087	0006100477	S	5043	GCCAGAAGGCAGAAGGGTAAGAGAGGGCAAGAGTGAGCAAGAGATGGAAG	2	-	176791082-176791131	2q31.1h	Homo sapiens KIAA1715 (KIAA1715), mRNA.				LNP; MGC102862; DKFZp686G1442; Ul; ulnaless	LNP; MGC102862; DKFZp686G1442; Ul; ulnaless
Homo sapiens	RefSeq	NM_012279.2	ILMN_27791	ZNF346	NM_012279.2	NM_012279.2		23567	38570153	NM_012279.2	ZNF346	NP_036411.1	ILMN_1732554	0005290376	S	2881	CATGACTCAAAAATGAGCTGAGAAGGAGTGTTATGGCCAGGTGCGGCGTC	5	+	176426159-176426208	5q35.2d	Homo sapiens zinc finger protein 346 (ZNF346), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 10488071] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [pmid 10488071] [evidence TAS]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 10488071] [evidence TAS]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Interacting selectively with double-stranded RNA [goid 3725] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	Zfp346; JAZ; DKFZp547M223	Zfp346; JAZ; DKFZp547M223
Homo sapiens	RefSeq	XR_019531.1	ILMN_168569	LOC642550	XR_019531.1	XR_019531.1		642550	113423850	XR_019531.1	LOC642550		ILMN_3289963	0007160064	M	575	AAAGGTGCTGCATTTTATAATCAAAGTCCAAATTCCTTTCTTATCTTGAC				12q21.2c	PREDICTED: Homo sapiens misc_RNA (LOC642550), miscRNA.					
Homo sapiens	Unigene	Hs.357539	ILMN_87459	HS.357539	Hs.357539		Hs.357539		13580080	BG572427			ILMN_1913937	0002100064	S	410	GTCTTCTGCTCTTCTCACAGACCAAAGCCCATCCATGACTACAGATAACG					602593470F1 NIH_MGC_79 Homo sapiens cDNA clone IMAGE:4721032 5, mRNA sequence					
Homo sapiens	RefSeq	NM_000925.1	ILMN_7913	PDHB	NM_000925.1	NM_000925.1		5162	4505686	NM_000925.1	PDHB	NP_000916.1	ILMN_1739274	0004540725	S	1270	TCTCCTCCCCTAGATGCCATGCTTCCTTTTGTCTGTTACGGTTGCCATGT	3	-	58388579-58388628	3p14.3a	Homo sapiens pyruvate dehydrogenase (lipoamide) beta (PDHB), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle [goid 6099] [pmid 2376596] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: pyruvate + lipoamide = S-acetyldihydrolipoamide + CO2 [goid 4739] [pmid 2376596] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	DKFZp564K0164; PHE1B	PHE1B; DKFZp564K0164
Homo sapiens	RefSeq	NM_001013719.1	ILMN_18725	LOC441136	NM_001013719.1	NM_001013719.1		441136	61966892	NM_001013719.1	LOC441136	NP_001013741.1	ILMN_1778980	0005420682	S	1824	GGGGGCTATCCCTGAAACTTTTGTCACATCCGCTAGACTTTCTTTTCCCA	6	+	27466340-27466389	6p22.1c	Homo sapiens hypothetical gene supported by AK092633 (LOC441136), mRNA.					
Homo sapiens	RefSeq	NM_005605.3	ILMN_1406	PPP3CC	NM_005605.3	NM_005605.3		5533	34147659	NM_005605.3	PPP3CC	NP_005596.2	ILMN_1690546	0005690382	S	1750	GAGCGAATGCCACCCCGAAAGGATAGCATACACGCTGGTGGGCCAATGAA	8	+	22385008-22385030:22386019-22386045	8p21.3a	Homo sapiens protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform (PPP3CC), mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10195903] [evidence EXP]	The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 15231831] [evidence EXP]	Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: a phosphoprotein + H2O = a protein + phosphate. Together with protein kinases, these enzymes control the state of phosphorylation of cell proteins and thereby provide an important mechanism for regulating cellular activity [goid 4721] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states [goid 5516] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CALNA3	CALNA3
Homo sapiens	RefSeq	NM_000996.2	ILMN_11938	RPL35A	NM_000996.2	NM_000996.2		6165	16117790	NM_000996.2	RPL35A	NP_000987.2	ILMN_1756360	0006370504	S	23	CATCTTGGCTCCTGTGGAGGCCTGCTGGGAACGGGACTTCTAAAAGGAAC	3	+	197677074-197677092:197677807-197677837	3q29i	Homo sapiens ribosomal protein L35a (RPL35A), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14567916] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]	Interacting selectively with transfer RNA [goid 49] [evidence IEA]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]		
Homo sapiens	RefSeq	NM_002027.2	ILMN_5092	FNTA	NM_002027.2	NM_002027.2		2339	66882377	NM_002027.2	FNTA	NP_002018.1	ILMN_1746494	0005810274	I	277	CCGGTGCCGCAGAATGATGGCCCCAATCCCGTGGTCCAGATCATTTATAG	8	+	42914263-42914312	8p11.21a	Homo sapiens farnesyltransferase, CAAX box, alpha (FNTA), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8599089] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11313965] [evidence EXP]	The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The covalent attachment of a prenyl moiety to a protein amino acid [goid 18346] [evidence IEA]; The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands [goid 7179] [pmid 8599089] [evidence TAS]; The covalent attachment of a farnesyl moiety to a protein amino acid [goid 18347] [pmid 8494894] [evidence TAS]; The covalent attachment of a geranylgeranyl moiety to a protein amino acid [goid 18348] [pmid 8106351] [evidence TAS]; The chemical reactions and pathways involving neurotransmitter receptors [goid 45213] [evidence IEA]	Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein [goid 8318] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: farnesyl diphosphate + protein-cysteine = S-farnesyl protein + diphosphate [goid 4660] [pmid 8276393] [evidence TAS]; Catalysis of the reaction: geranylgeranyl diphosphate + protein-cysteine = S-geranylgeranyl-protein + diphosphate. This reaction is the formation of a thioether linkage between the C-1 atom of the geranylgeranyl group and a cysteine residue fourth from the C-terminus of the protein. The protein substrates have the C-terminal sequence CA1A2X, where the terminal residue, X, is preferably leucine and A2 should not be aromatic. Known substrates include most g-subunits of heterotrimeric G proteins and Ras-related GTPases such as members of the Ras and Rac/Rho families [goid 4662] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15170324] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting (directly or indirectly) with acetylcholine receptors such that the proportion of receptors in the active form is changed [goid 30548] [evidence IEA]	FPTA; MGC99680; PGGT1A	FPTA; MGC99680; PGGT1A
Homo sapiens	RefSeq	NM_021970.2	ILMN_13073	MAP2K1IP1	NM_021970.2	NM_021970.2		8649	21614526	NM_021970.2	MAP2K1IP1	NP_068805.1	ILMN_1659415	0004480026	S	950	CCACTTGAGCCGTTAAGTGCTGCCAATTGTACAATATGCCCAGGCTTGCA	4	-	101021798-101021847	4q23b	Homo sapiens mitogen-activated protein kinase kinase 1 interacting protein 1 (MAP2K1IP1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; The lipid bilayer surrounding a late endosome [goid 31902] [evidence IEA]	The initiation of the activity of the inactive enzyme MAP kinase kinase by phosphorylation by a MAPKKK [goid 186] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15016825] [evidence IPI]; Increases the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 19209] [evidence IEA]	MP1	MP1
Homo sapiens	RefSeq	NM_002176.2	ILMN_10140	IFNB1	NM_002176.2	NM_002176.2		3456	50593016	NM_002176.2	IFNB1	NP_002167.1	ILMN_1682245	0001510669	S	622	GGTTACCTCCGAAACTGAAGATCTCCTAGCCTGTGCCTCTGGGACTGGAC	9	-	21077272-21077304:21077305-21077321	9p21.3d	Homo sapiens interferon, beta 1, fibroblast (IFNB1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 2414376] [evidence IC ]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11337497] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 11337497] [evidence IDA]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 6919] [pmid 10918594] [evidence NAS]; Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell [goid 7166] [pmid 10640778] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 3872918] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 12120696] [evidence NAS]; The change in morphology and behavior of a natural killer cell in response to a cytokine, chemokine, cellular ligand, or soluble factor [goid 30101] [pmid 11987821] [evidence NAS]; The expansion of a B cell population by cell division. Follows B cell activation [goid 42100] [pmid 3135963] [evidence NAS]; Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism [goid 42742] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of the innate immune response, the organism's first line of defense against infection [goid 45089] [pmid 11987821] [evidence NAS]; Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I [goid 45343] [pmid 8805651] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of the introduction of virus particles into the cell [goid 46597] [pmid 10963806] [evidence NAS]	Interacting selectively with the interferon-alpha/beta receptor [goid 5132] [pmid 2414376] [evidence NAS]	IFF; MGC96956; IFB; IFNB	IFF; MGC96956; IFB; IFNB
Homo sapiens	RefSeq	XM_001716704.1	ILMN_350685	LOC100130288	XM_001716704.1	XM_001716704.1		100130288	169165065	XM_001716704.1	LOC100130288	XP_001716756.1	ILMN_3271128	0000110673	M	55	ACACTGGACTGTGCGGGGCTCGCCAGCCGCCGGCTCCTTCACGAACCAAA	3	-	19963676-19963705:19963859-19963878	3p24.3c	PREDICTED: Homo sapiens hypothetical LOC100130288 (LOC100130288), mRNA.					
Homo sapiens	RefSeq	XR_037716.1	ILMN_350016	LOC100129795	XR_037716.1	XR_037716.1		100129795	169202302	XR_037716.1	LOC100129795		ILMN_3270310	0002900376	M	185	GGATTGCACGTTGTTGAAGCAGAGGCCATGAATTGCGAAGGCAGTCAATT	11	-	74468612-74468661	11q13.4c	PREDICTED: Homo sapiens misc_RNA (LOC100129795), miscRNA.					
Homo sapiens	RefSeq	NM_006200.2	ILMN_6597	PCSK5	NM_006200.2	NM_006200.2		5125	20336245	NM_006200.2	PCSK5	NP_006191.2	ILMN_1767934	0001740343	S	3082	ATGGGAGCCATTTGCAAGGATGCAACGGAAGAGTCCTGGGCGGAAGGAGG	9	+	77994461-77994482:77997973-77998000	9q21.13c	Homo sapiens proprotein convertase subtilisin/kexin type 5 (PCSK5), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 8940009] [evidence ISS]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence ISS]; The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks [goid 5796] [pmid 8615794] [evidence EXP]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence ISS]	The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [pmid 8940009] [evidence ISS]; The process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine [goid 1822] [pmid 18519639] [evidence IMP]; The regulated release of renin into the blood stream by juxtoglomerular cells [goid 2001] [pmid 8901832] [evidence IEP]; The proteolytic removal of a signal peptide from a protein during or after transport to a specific location in the cell [goid 6465] [pmid 16912035] [evidence IDA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8901832] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 8940009] [evidence ISS]; Attachment of the blastocyst to the uterine lining [goid 7566] [pmid 8940009] [evidence ISS]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [pmid 18519639] [evidence IMP]; Any process involved in the assembly, maturation, egress, and release of progeny virions [goid 19067] [pmid 8940009] [evidence ISS]; Any process involved in the assembly, maturation, egress, and release of progeny virions [goid 19067] [pmid 8940009] [evidence IEP]; The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract [goid 30323] [pmid 8940009] [evidence ISS]; The generation of a mature nerve growth factor by proteolysis of a precursor [goid 32455] [pmid 12787574] [evidence EXP]; The process by which the anatomical structures of limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping. For example a leg, arm or some types of fin [goid 35108] [pmid 8940009] [evidence ISS]; The chemical reactions and pathways resulting in the formation of cytokines, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity [goid 42089] [pmid 8940009] [evidence ISS]; The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide [goid 43043] [pmid 8901832] [evidence IDA]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [pmid 8940009] [evidence ISS]; The process whose specific outcome is the progression of the gut over time, from its formation to the mature structure during embryonic development. The gut is the region of the digestive tract extending from the beginning of the intestines to the anus [goid 48566] [pmid 18519639] [evidence IMP]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [pmid 8940009] [evidence ISS]; The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure [goid 48706] [pmid 18519639] [evidence IMP]; The hydrolysis of a peptide bond or bonds within a protein during protein maturation, the process leading to the attainment of the full functional capacity of a protein [goid 51605] [pmid 8901832] [evidence IDA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with peptides, any of a group of organic compounds comprising two or more amino acids linked by peptide bonds [goid 42277] [pmid 8940009] [evidence ISS]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]	PC6A; SPC6; PC6; PC5	PC6A; SPC6; PC6; PC5
Homo sapiens	RefSeq	NM_152405.1	ILMN_18491	JMY	NM_152405.2	NM_152405.2		133746	94721314	NM_152405.2	JMY	NP_689618.2	ILMN_1762080	0002630554	S	2100	CCCAGAGTCAGAGGACGAAGAGGAGGCTTTACCTTGCACAGACTGGGAGA	5	+	78647832-78647881	5q14.1c	Homo sapiens junction-mediating and regulatory protein (JMY), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [evidence ISS]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence ISS]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence IEA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [evidence ISS]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of activity of a transcription factor, any factor involved in the initiation or regulation of transcription [goid 51091] [evidence ISS]	The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [evidence ISS]; Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence ISS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10518217] [evidence IPI]	FLJ37870; MGC163496	FLJ37870
Homo sapiens	RefSeq	XM_942538.1	ILMN_45666	LOC652842	XM_942538.1	XM_942538.1		652842	89064941	XM_942538.1	LOC652842	XP_947631.1	ILMN_1734806	0006290753	S	137	GTGACGTGAAAGTCTACAAGGAGTTCTGTGACTTTTATGCGAAATTGTGA					PREDICTED: Homo sapiens similar to LIM and senescent cell antigen-like domains 3 (LOC652842), mRNA.					
Homo sapiens	RefSeq	XM_938141.1	ILMN_167160	LOC647954	XR_018676.1	XR_018676.1		647954	113417184	XR_018676.1	LOC647954		ILMN_1687867	0006420674	S	1116	TCTGAGCTCGGCCTGTGGGGGCCTCACAAGCCCCGGCCTCAGCTACGGCC				5q23.2b	PREDICTED: Homo sapiens misc_RNA (LOC647954), miscRNA.					
Homo sapiens	RefSeq	NM_012313.1	ILMN_6886	KIR2DS3	NM_012313.1	NM_012313.1		3808	6912473	NM_012313.1	KIR2DS3	NP_036445.1	ILMN_2175715	0003450202	S	730	ACCCCAGACACCTACACGTTCTGATTGGGACCTCAGTGGTCAAACTCCCT	19	+	111724-111773		Homo sapiens killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 3 (KIR2DS3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8765026] [evidence TAS]	A defense response that is mediated by cells [goid 6968] [pmid 8765026] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NKAT7	NKAT7
Homo sapiens	RefSeq	NM_012313.1	ILMN_6886	KIR2DS3	NM_012313.1	NM_012313.1		3808	6912473	NM_012313.1	KIR2DS3	NP_036445.1	ILMN_1793525	0004150156	S	38	ATGTGTTGGGTTCTTCTGGCTGCAGGGGGCCTGGCCACATGAGGGATTCC	19	+	98172-98179:99656-99691:102136-102141		Homo sapiens killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 3 (KIR2DS3), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8765026] [evidence TAS]	A defense response that is mediated by cells [goid 6968] [pmid 8765026] [evidence TAS]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	NKAT7	NKAT7
Homo sapiens	RefSeq	NM_025084.1	ILMN_1721	FLJ22795	NM_025084.1	NM_025084.1		80154	13443001	NM_025084.1	FLJ22795	NP_079360.1	ILMN_2150802	0005550445	S	2491	CACCTGTCAAATGTCACAGATCTGGGAGGGGACTTAAGACTTATCATGCC	15	-	80551139-80551188	15q25.2a	Homo sapiens hypothetical protein FLJ22795 (FLJ22795), mRNA.					
Homo sapiens	RefSeq	NM_006017.1	ILMN_21827	PROM1	NM_006017.1	NM_006017.1		8842	5174386	NM_006017.1	PROM1	NP_006008.1	ILMN_1786720	0007400452	S	3717	TCCAGATGTAGGCATTCCCCCCAGGTCTTTTCATGTGCAGATTGCAGTTC	4	-	15578982-15579031	4p15.32d	Homo sapiens prominin 1 (PROM1), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9389720] [evidence TAS]; Thin cylindrical membrane-covered projections on the surface of an animal cell containing a core bundle of actin filaments. Present in especially large numbers on the absorptive surface of intestinal cells [goid 5902] [evidence IEA]; Dense covering of microvilli on the apical surface of epithelial cells in the intestine and kidney; the microvilli aid absorption by increasing the surface area of the cell [goid 5903] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 16809613] [evidence IDA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]		AC133; MSTP061; PROML1; CD133	AC133; MSTP061; PROML1; CD133
Homo sapiens	RefSeq	NM_177972.1	ILMN_11520	TUB	NM_177972.1	NM_177972.1		7275	29826278	NM_177972.1	TUB	NP_813977.1	ILMN_1755352	0004560072	A	5908	CCTAGAACGCAACTTAGGATGGCTAGGAAAGGGAAGCCTGACTGCTCGGT	11	+	8083980-8084029	11p15.4b	Homo sapiens tubby homolog (mouse) (TUB), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11000483] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11000483] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [evidence IEA]	rd5	rd5
Homo sapiens	RefSeq	NM_177972.1	ILMN_11520	TUB	NM_177972.1	NM_177972.1		7275	29826278	NM_177972.1	TUB	NP_813977.1	ILMN_1779579	0001940458	I	137	GCCCCCGAGAGACATGACTTCCAAGCCGCATTCCGACTGGATTCCCTACA	11	+	8059621-8059633:8059634-8059670	11p15.4b	Homo sapiens tubby homolog (mouse) (TUB), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11000483] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11000483] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	The sequence of reactions within a cell required to convert absorbed photons into a molecular signal [goid 7602] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	A G-protein coupled receptor that responds to incidental electromagnetic radiation, particularly visible light [goid 8020] [evidence IEA]	rd5	rd5
Homo sapiens	RefSeq	NM_020364.2	ILMN_9048	DAZ3	NM_020364.2	NM_020364.2		57054	54292109	NM_020364.2	DAZ3	NP_065097.2	ILMN_3247525	0001510189	S	1	GCGGGCGGTTCTACCTCCGAGGGTTCGCCCGCCCTTGGTTTTCCTTACAC	Y	-	26959470-26959519	Yq11.223e	Homo sapiens deleted in azoospermia 3 (DAZ3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]	pDP1679; MGC126441	pDP1679; MGC126441
Homo sapiens	RefSeq	NM_001105543.1	ILMN_341419	PLXNA4	NM_001105543.1	NM_001105543.1		91584	157738646	NM_001105543.1	PLXNA4	NP_001099013.1	ILMN_3231841	0001170546	I	2976	CGTCCCAGGAGTTCCATGTGAAACTGGCTCTGTGTGCATTGAAGCATGGC	7	-	132068629-132068678	7q32.3c-q32.3d	Homo sapiens plexin A4 (PLXNA4), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	PRO34003; PLEXA4; FAYV2820; DKFZp434G0625PRO34003; KIAA1550; PLXNA4B; PLXNA4A; FLJ38287; DKFZp566O0546; FLJ35026; DKFZp434G0625; PLXNA4	PRO34003; PLEXA4; FAYV2820; DKFZp434G0625PRO34003; PLXNA4B; FLJ38287; FLJ35026; PLXNA4; KIAA1550; PLXNA4A; DKFZp566O0546; DKFZp434G0625
Homo sapiens	RefSeq	XR_015547.2	ILMN_179925	LOC728791	XR_015547.2	XR_015547.2		728791	169165957	XR_015547.2	LOC728791		ILMN_3301052	0005570630	M	387	GGAAGCCGACAGAGATACCTACAGACGGAGTTTTGTGCCCCCTGGTGCCA				3q13.31a	PREDICTED: Homo sapiens misc_RNA (LOC728791), miscRNA.					
Homo sapiens	RefSeq	NM_021032.2	ILMN_20773	FGF12	NM_021032.2	NM_021032.2		2257	21614509	NM_021032.2	FGF12	NP_066360.1	ILMN_1810283	0004120521	I	119	TGTGCGAGAGGCACGTCCTCGGGGTGTTCAGCAAAGTGCGCTTCTGCAGC	3	-	193608538-193608587	3q28e-q29a	Homo sapiens fibroblast growth factor 12 (FGF12), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10049777] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8790420] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8790420] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10049777] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8790420] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10049777] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8790420] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 10049777] [evidence TAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8790420] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 10049777] [evidence TAS]	FHF1; FGF12B	FHF1; FGF12B
Homo sapiens	RefSeq	NM_004113.3	ILMN_20773	FGF12	NM_021032.2	NM_021032.2		2257	21614509	NM_021032.2	FGF12	NP_066360.1	ILMN_1677680	0004070184	A	2028	GCAGCTATGACTCCAACAGACAGGATTGTGTGAGCAGCTGAAAGGAGCAA	3	-	193343146-193343195	3q28e-q29a	Homo sapiens fibroblast growth factor 12 (FGF12), transcript variant 1, mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 10049777] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8790420] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8790420] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10049777] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8790420] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 10049777] [evidence TAS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 8790420] [evidence TAS]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [pmid 10049777] [evidence TAS]	The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8790420] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 10049777] [evidence TAS]	FHF1; FGF12B	FHF1; FGF12B
Homo sapiens	RefSeq	NM_178505.4	ILMN_177334	TMEM26	NM_178505.5	NM_178505.5		219623	141802191	NM_178505.5	TMEM26	NP_848600.2	ILMN_1809639	0004890600	S	4889	CTGATTTGGGGTTAAACTAGGCGGCTGGAGGATGTTTACAGCTTTGAGGC	10	-	62836623-62836672	10q21.2a	Homo sapiens transmembrane protein 26 (TMEM26), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC35010; DKFZp686D09128	MGC35010; DKFZp686D09128
Homo sapiens	RefSeq	XM_941892.1	ILMN_31329	LOC654244	XM_941892.2	XM_941892.2		654244	113422800	XM_941892.2	LOC654244	XP_946985.1	ILMN_1804299	0005080142	S	15	TGAGCGCGGGCGGCCACGCGCGGAAGGCGCGGGCTGAGCAGAGCCGGCGT					PREDICTED: Homo sapiens similar to mitochondrial carrier protein MGC4399 (LOC654244), mRNA.					
Homo sapiens	RefSeq	XM_930446.1	ILMN_31329	LOC654244	XM_941892.2	XM_941892.2		654244	113422800	XM_941892.2	LOC654244	XP_946985.1	ILMN_1697802	0003190070	I	445	CGATCTTGGAGAAAGAGGGACCAAAGTCACTTTTTAGAGGCTTGGGTCCA					PREDICTED: Homo sapiens similar to mitochondrial carrier protein MGC4399 (LOC654244), mRNA.					
Homo sapiens	RefSeq	NM_000450.1	ILMN_7997	SELE	NM_000450.1	NM_000450.1		6401	4506870	NM_000450.1	SELE	NP_000441.1	ILMN_2193892	0002480497	S	3546	GGGGCAGAAAAACTCTGGGAAATAAGAGAGAACAACTACTGTGATCAGGC	1	-	167958643-167958692	1q24.2c	Homo sapiens selectin E (endothelial adhesion molecule 1) (SELE), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9290466] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2466335] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 2466335] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	LECAM2; ESEL; ELAM; CD62E; ELAM1	LECAM2; ESEL; ELAM; CD62E; ELAM1
Homo sapiens	RefSeq	NM_000450.1	ILMN_7997	SELE	NM_000450.1	NM_000450.1		6401	4506870	NM_000450.1	SELE	NP_000441.1	ILMN_1739393	0004060600	S	3227	CTGTATGTTAGGGTGCTCTGGAAGAGAGGAATGCCTGTGTGAGCAAGCAT	1	-	167958962-167959011	1q24.2c	Homo sapiens selectin E (endothelial adhesion molecule 1) (SELE), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 9290466] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2466335] [evidence TAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [pmid 2466335] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	LECAM2; ESEL; ELAM; CD62E; ELAM1	LECAM2; ESEL; ELAM; CD62E; ELAM1
Homo sapiens	RefSeq	NM_001001791.1	ILMN_1489	C10ORF55	NM_001001791.1	NM_001001791.1		414236	49169836	NM_001001791.1	C10orf55	NP_001001791.1	ILMN_1708277	0002320753	S	1717	GACGTTACAGGATTGTGGGGACAAAGTCCTAGGGCATAAACTGTTGGTGC	10	-	75340124-75340173	10q22.2a	Homo sapiens chromosome 10 open reading frame 55 (C10orf55), mRNA.				bA417O11.3	bA417O11.3
Homo sapiens	RefSeq	NM_198479.2	ILMN_165657	TPRX1	NM_198479.2	NM_198479.2		284355	72004268	NM_198479.2	TPRX1	NP_940881.2	ILMN_1736536	0001170202	S	1496	AGCCTGAGCGTTTCTCTGCTGGGATTGGAGTCGCTGCTCACTGGGATATC	19	-	52996605-52996654	19q13.32c	Homo sapiens tetra-peptide repeat homeobox 1 (TPRX1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	FLJ40321; TPRX	FLJ40321; TPRX
Homo sapiens	RefSeq	NM_000883.2	ILMN_1805	IMPDH1	NM_000883.2	NM_000883.2		3614	34328929	NM_000883.2	IMPDH1	NP_000874.2	ILMN_1690343	0004810041	I	126	ATGGGAGAGACGAACCGAGTCTAGGCATCTGCGTAGCAGCGCCGGGGAGA	7	-	127837367-127837416	7q32.1a	Homo sapiens IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7903306] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 7903306] [evidence EXP]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 1969416] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	sWSS2608; RP10; DKFZp781N0678; LCA11; IMPD; IMPD1	sWSS2608; RP10; DKFZp781N0678; LCA11; IMPD; IMPD1
Homo sapiens	RefSeq	NM_000883.2	ILMN_1805	IMPDH1	NM_000883.2	NM_000883.2		3614	34328929	NM_000883.2	IMPDH1	NP_000874.2	ILMN_1676515	0003120431	A	2711	GTCATGGCCGCCTGCCTGTCATTCCTGACTCACCACCGTCCCCAGGTGAA	7	-	127819687-127819736	7q32.1a	Homo sapiens IMP (inosine monophosphate) dehydrogenase 1 (IMPDH1), transcript variant 1, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 7903306] [evidence EXP]	The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate moiety at either the 3' or 5'-hydroxyl group of its glycose moiety [goid 6164] [evidence IEA]; The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate [goid 6177] [evidence IEA]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The expansion of a lymphocyte population by cell division [goid 46651] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [evidence IEA]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 7903306] [evidence EXP]; Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+ [goid 3938] [pmid 1969416] [evidence TAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	sWSS2608; RP10; DKFZp781N0678; LCA11; IMPD; IMPD1	sWSS2608; RP10; DKFZp781N0678; LCA11; IMPD; IMPD1
Homo sapiens	RefSeq	NM_153271.1	ILMN_3226	SNX33	NM_153271.1	NM_153271.1		257364	23397573	NM_153271.1	SNX33	NP_695003.1	ILMN_1736093	0005670390	S	2815	GAGTTCACCAGCAATAACTCCCCACACTCGAAGCAGGTCCAAACCCAGGA	15	+	73737605-73737654	15q24.2a	Homo sapiens sorting nexin 33 (SNX33), mRNA.		Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]	MGC32065; SH3PXD3C; SNX30	MGC32065; SH3PXD3C; SNX30
Homo sapiens	RefSeq	NM_001048181.1	ILMN_174590	OPN1MW2	NM_001048181.1	NM_001048181.1		728458	114687591	NM_001048181.1	OPN1MW2	NP_001041646.1	ILMN_3241647	0000130246	S	1174	TCTCCATCCCTGTAAAATAAATGTAATTTATCTTTGCCAAAACCAACAAA	X	+	153151904-153151953	Xq28g	Homo sapiens opsin 1 (cone pigments), medium-wave-sensitive 2 (OPN1MW2), mRNA.					
Homo sapiens	RefSeq	NM_198493.1	ILMN_20995	ANKRD45	NM_198493.1	NM_198493.1		339416	38348297	NM_198493.1	ANKRD45	NP_940895.1	ILMN_1733716	0005560224	S	2317	CTGTAACCTGTAACTCCTGCACTCAAGTGATCCTCCCACCATGCTTGGGT	1	-	171844402-171844451	1q25.1a	Homo sapiens ankyrin repeat domain 45 (ANKRD45), mRNA.			Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	MGC161633; MGC161631; RP3-436N22.4; FLJ45235	MGC161633; MGC161631; RP3-436N22.4; FLJ45235
Homo sapiens	RefSeq	NM_001006938.2	ILMN_5218	TCEAL6	NM_001006938.2	NM_001006938.2		158931	118600970	NM_001006938.2	TCEAL6	NP_001006939.2	ILMN_3251393	0000730196	S	1226	ATCCCTATGTCTTCCCTAGGTCGAGCCAGGTCAGTGGGCACTGTTGCTAG	X	-	101395189-101395238	Xq22.1d	Homo sapiens transcription elongation factor A (SII)-like 6 (TCEAL6), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]		Tceal3	Tceal3
Homo sapiens	RefSeq	XR_038536.1	ILMN_345514	LOC648283	XR_038536.1	XR_038536.1		648283	169217139	XR_038536.1	LOC648283		ILMN_3211365	0000130278	A	920	GAGGTCTCACAAGAATCTTTTCTTATCTAAGATGCAACATGGAGCCGAGC				Xq21.1e	PREDICTED: Homo sapiens misc_RNA (LOC648283), miscRNA.					
Homo sapiens	RefSeq	XM_944693.1	ILMN_138555	ITGB5	XM_944693.1	XM_944693.1		3693	88970834	XM_944693.1	ITGB5	XP_949786.1	ILMN_1761674	0003450301	I	18	CCAGCACACAGCCTGTGGTTTTGGATCCTGGAGTACCTGTCTGGTACCTG				3q21.2a	PREDICTED: Homo sapiens integrin, beta 5, transcript variant 8 (ITGB5), mRNA.	A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]		
Homo sapiens	RefSeq	NM_022762.3	ILMN_6808	RMND5B	NM_022762.3	NM_022762.3		64777	34147687	NM_022762.3	RMND5B	NP_073599.2	ILMN_1737847	0004200170	S	1549	TGGCACCTGGCTCCATGGCATAAGGAAAGGGAGATGCTGGCCTCTGTGCT	5	+	177507826-177507875	5q35.3b	Homo sapiens required for meiotic nuclear division 5 homolog B (S. cerevisiae) (RMND5B), mRNA.				FLJ22318; DKFZp434K0926	FLJ22318; DKFZp434K0926
Homo sapiens	RefSeq	NM_014856.2	ILMN_308885	DENND4B	NM_014856.2	NM_014856.2		9909	148922919	NM_014856.2	DENND4B	NP_055671.2	ILMN_3245066	0005690324	S	5464	CCATGGTCCGGTGGTTTGTAGTTCCTTCAAAGTCAGGCACTGGGAGCTAG	1	-	153902151-153902200	1q21.3d	Homo sapiens DENN/MADD domain containing 4B (DENND4B), mRNA.				DKFZp762N174; FLJ26202; KIAA0476	DKFZp762N174; FLJ26202; KIAA0476
Homo sapiens	RefSeq	NM_021170.2	ILMN_18566	HES4	NM_021170.2	NM_021170.2		57801	20127596	NM_021170.2	HES4	NP_066993.1	ILMN_1653466	0005260070	S	817	CCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTA	1	-	924218-924267	1p36.33b	Homo sapiens hairy and enhancer of split 4 (Drosophila) (HES4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	Unigene	Hs.545462	ILMN_108667	HS.545462	Hs.545462		Hs.545462		39890097	CK300584			ILMN_1840685	0005130445	S	295	GACCTGGGCTCGAGCAGGTCCAAAATAGCACCTGTTCCCATCATTCAGAC	8	-	34081107-34081156		UI-E-EJ1-ajz-m-04-0-UI.s1 UI-E-EJ1 Homo sapiens cDNA clone UI-E-EJ1-ajz-m-04-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_014696.3	ILMN_180661	GPRIN2	NM_014696.3	NM_014696.3		9721	112821687	NM_014696.3	GPRIN2	NP_055511.2	ILMN_3241501	0006110072	S	1510	TGAGGAGCTGTGGCCCTTGGAGCTGGCCTGGGCCCACTGACTTAGTCCTA	10	+	46420261-46420263:46420264-46420310	10q11.22a	Homo sapiens G protein regulated inducer of neurite outgrowth 2 (GPRIN2), mRNA.				KIAA0514; GRIN2; MGC15171	KIAA0514; GRIN2; MGC15171
Homo sapiens	Unigene	Hs.543113	ILMN_106773	HS.543113	Hs.543113		Hs.543113		6576594	AW242747			ILMN_1917079	0004670356	S	301	AGGAGCAAGGGCTACTTGAAGAAATGGTTGAATCTTGGGCTGGGGCAGGA	3	-	67881266-67881315		xm90f01.x1 NCI_CGAP_Kid11 Homo sapiens cDNA clone IMAGE:2691481 3, mRNA sequence					
Homo sapiens	RefSeq	NM_207507.1	ILMN_21589	FLJ45202	NM_207507.1	NM_207507.1		401508	46409641	NM_207507.1	FLJ45202	NP_997390.1	ILMN_1779497	0003390309	S	1507	TGGTTGCAGGAAGGTGGGGATTCATTGGCCACAAAAGGGACTGAGGAAGC	9	-	65227258-65227307	9q12f	Homo sapiens FLJ45202 protein (FLJ45202), mRNA.					
Homo sapiens	RefSeq	NM_145186.1	ILMN_138432	ABCC11	NM_145186.1	NM_145186.1		85320	21729875	NM_145186.1	ABCC11	NP_660187.1	ILMN_1713008	0006900537	A	4167	GTGCAGCTTCGAGGCCCACAGTCTGCGACCTTCTTGTTTGGAGATGAGAA	16	-	46758582-46758631	16q12.1a	Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 11 (ABCC11), transcript variant 3, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate to directly drive the active transport of a substance across a membrane [goid 42626] [evidence IEA]	MRP8	MRP8
Homo sapiens	RefSeq	XR_037049.1	ILMN_350249	LOC100129933	XR_037049.1	XR_037049.1		100129933	169202861	XR_037049.1	LOC100129933		ILMN_3270626	0001430300	M	1376	TGGGACCGGGATGGGTCATCTGGACAAATAGGGAGGGTGGGCGGGTGGGC				11q12.1c	PREDICTED: Homo sapiens misc_RNA (LOC100129933), miscRNA.					
Homo sapiens	Unigene	Hs.382131	ILMN_88925	HS.382131	Hs.382131		Hs.382131		34190210	BC030648			ILMN_1840957	0007040192	S	2776	CCCCAACTTCACGAAAACCACGCAGCAAAGAGGGAGAAGAGGAACAGCGC	8	-	1232704-1232753		Homo sapiens hypothetical protein LOC286083, mRNA (cDNA clone IMAGE:4823107)					
Homo sapiens	RefSeq	NM_005827.1	ILMN_17389	SLC35B1	NM_005827.1	NM_005827.1		10237	5032212	NM_005827.1	SLC35B1	NP_005818.1	ILMN_1727840	0005290692	S	926	CAATTTTGGCCTCTGTGATCCTCTTCGCCAATCCCATCAGCCCCATGCAG	17	-	47780247-47780296	17q21.33a	Homo sapiens solute carrier family 35, member B1 (SLC35B1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 9010752] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y [goid 8643] [evidence IEA]	Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in) [goid 5351] [evidence IEA]; Catalysis of the transfer of a UDP-galactose from one side of the membrane to the other. UDP-galactose is a substance composed of galactose in glycosidic linkage with uridine diphosphate [goid 5459] [pmid 9010752] [evidence TAS]	UGTREL1	UGTREL1
Homo sapiens	RefSeq	NM_018000.1	ILMN_11783	MREG	NM_018000.2	NM_018000.2		55686	124487398	NM_018000.2	MREG	NP_060470.2	ILMN_1713679	0000070468	S	863	TTACCCCAAGAAGCCTGGGGTTCCATGCCTGGCAGATGGCCAGAAAGAAC	2	-	216809614-216809663	2q35b	Homo sapiens melanoregulin (MREG), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [evidence IEA]	The process whereby a relatively unspecialized cell acquires specialized features of a melanocyte [goid 30318] [evidence IEA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IEA]; The deposition of coloring matter in an organism, tissue or cell, occurring during development [goid 48066] [evidence IEA]		WDT2; MGC90296; DSU; FLJ10116	MGC90296; WDT2; FLJ10116
Homo sapiens	Unigene	Hs.374311	ILMN_88391	HS.374311	Hs.374311		Hs.374311		28846293	CB305782			ILMN_1827287	0006420092	S	655	TCCCCTTCCAGACACCCACAGGGTCACAGTCACAGGCTAGATCAGAGGTC	3	+	49165952-49166001		UI-CF-EN1-aeg-k-22-0-UI.s1 UI-CF-EN1 Homo sapiens cDNA clone UI-CF-EN1-aeg-k-22-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_020247.3	ILMN_17033	CABC1	NM_020247.4	NM_020247.4		56997	104486445	NM_020247.4	CABC1	NP_064632.2	ILMN_1731064	0006220180	S	2584	GGCTGGAGCTGGGAGAGGTGCTGAGCTAACAGTGCCAACAAGTGCTCCTT	1	+	225241529-225241578	1q42.13a	Homo sapiens chaperone, ABC1 activity of bc1 complex homolog (S. pombe) (CABC1), nuclear gene encoding mitochondrial protein, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death [goid 8219] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule [goid 16301] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	MGC4849; COQ8; ADCK3	COQ8; ADCK3
Homo sapiens	RefSeq	NM_182641.2	ILMN_161954	BPTF	NM_182641.3	NM_182641.3		2186	119395731	NM_182641.3	BPTF	NP_872579.2	ILMN_1699179	0000240450	I	7308	CATCCCCATCCCGTCCTCAGCTACAAATACAGCAGCCACAGCCCCAAGTC	17	+	63372533-63372582	17q24.2b	Homo sapiens bromodomain PHD finger transcription factor (BPTF), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10403843] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 14609955] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7621746] [evidence TAS]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 122] [pmid 10727212] [evidence IDA]; Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation [goid 6338] [pmid 14609955] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 14609955] [evidence IMP]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [pmid 14609955] [evidence IMP]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate in the presence of single- or double-stranded DNA; drives another reaction [goid 8094] [pmid 14609955] [evidence IDA]; Interacting selectively with a transcription factor, any protein required to initiate or regulate transcription [goid 8134] [pmid 10727212] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [pmid 14609955] [evidence IMP]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 10575013] [evidence IMP]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [pmid 10403843] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FAC1; FALZ; NURF301	BPTF; FAC1; NURF301
Homo sapiens	RefSeq	NM_004595.2	ILMN_21079	SMS	NM_004595.2	NM_004595.2		6611	21264340	NM_004595.2	SMS	NP_004586.2	ILMN_1694305	0006020402	S	1071	GCACTGTCGCTCTATGAAGAACAGCTGGGGCGCCTGTATTGTCCTGTGGA	X	+	21920660-21920709	Xp22.11b	Homo sapiens spermine synthase (SMS), mRNA.		The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 6555] [pmid 7546290] [evidence TAS]; The chemical reactions and pathways involving spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses, which is involved in nucleic acid packaging. Synthesis is regulated by ornithine decarboxylase which plays a key role in control of DNA replication [goid 8215] [evidence IEA]	Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine [goid 4766] [pmid 9299240] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine [goid 16768] [evidence IEA]	SpS; SPMSY; MRSR; SRS	SpS; SPMSY; MRSR; SRS
Homo sapiens	RefSeq	NM_004595.2	ILMN_21079	SMS	NM_004595.2	NM_004595.2		6611	21264340	NM_004595.2	SMS	NP_004586.2	ILMN_2225318	0004490341	S	1062	CTGACAGAAGCACTGTCGCTCTATGAAGAACAGCTGGGGCGCCTGTATTG	X	+	21920651-21920700	Xp22.11b	Homo sapiens spermine synthase (SMS), mRNA.		The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins [goid 6555] [pmid 7546290] [evidence TAS]; The chemical reactions and pathways involving spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses, which is involved in nucleic acid packaging. Synthesis is regulated by ornithine decarboxylase which plays a key role in control of DNA replication [goid 8215] [evidence IEA]	Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine [goid 4766] [pmid 9299240] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: S-adenosylmethioninamine + spermidine = 5'-methylthioadenosine + spermine [goid 16768] [evidence IEA]	SpS; SPMSY; MRSR; SRS	SpS; SPMSY; MRSR; SRS
Homo sapiens	RefSeq	NM_022365.2	ILMN_22102	DNAJC1	NM_022365.3	NM_022365.3		64215	109715821	NM_022365.3	DNAJC1	NP_071760.2	ILMN_1683234	0002450678	S	1707	GCAGAACAAAACGAGTCCAGCGACGAGGAGAGCCTGAGAAAAGAGAGAGC	10	-	22217443-22217481:22217969-22217979	10p12.31a	Homo sapiens DnaJ (Hsp40) homolog, subfamily C, member 1 (DNAJC1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence ISS]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA [goid 6417] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein [goid 45861] [pmid 14668352] [evidence TAS]; Any process that modulates the frequency, rate or extent of the regulated release of a protein from a cell or group of cells [goid 50708] [pmid 14668352] [evidence IDA]	Functions to increase the rate of ATP hydrolysis [goid 1671] [pmid 14668352] [evidence TAS]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Modulates the activity of chaperones of the Hsp70/Hsc70 class [goid 30192] [pmid 14668352] [evidence TAS]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [evidence IEA]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [evidence IEA]; Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]	MGC131954; ERdj1; DNAJL1; HTJ1	ERdj1; DNAJL1; HTJ1
Homo sapiens	RefSeq	NM_014726.1	ILMN_9213	TBKBP1	NM_014726.1	NM_014726.1		9755	7662301	NM_014726.1	TBKBP1	NP_055541.1	ILMN_1808846	0003310646	S	3788	CTTCTACGGCGAAAGCCTGCCACCCCACAATGAATCCACCCTGCTCCACT	17	+	43144082-43144131	17q21.32b	Homo sapiens TBK1 binding protein 1 (TBKBP1), mRNA.		Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]		ProSAPiP2; KIAA0775	ProSAPiP2; KIAA0775
Homo sapiens	RefSeq	NM_014117.2	ILMN_4283	C16ORF72	NM_014117.2	NM_014117.2		29035	38016918	NM_014117.2	C16orf72	NP_054836.2	ILMN_1773407	0003180450	S	3734	ACGTCATAGCTCCTTAGTTCTGCTCCTGTCGCCCTAACTTGGCATGGGCA	16	+	9120811-9120860	16p13.2b	Homo sapiens chromosome 16 open reading frame 72 (C16orf72), mRNA.				PRO0149; FLJ41272	PRO0149; FLJ41272
Homo sapiens	RefSeq	NM_000698.2	ILMN_174220	ALOX5	XM_001127464.1	XM_001127464.1		240	113421969	XM_001127464.1	ALOX5	XP_001127464.1	ILMN_1680996	0001780273	A	2055	GCACAGCGTCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAA				10q11.21d	PREDICTED: Homo sapiens arachidonate 5-lipoxygenase (ALOX5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid [goid 19370] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: arachidonate + O2 = (6E,8Z,11Z,14Z)-(5S)-5-hydroperoxycosa-6,8,11,14-tetraenoate [goid 4051] [pmid 2829172] [evidence TAS]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11785969] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11297527] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11785969] [evidence IPI]; Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate [goid 16165] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]		5LPG; MGC163204; LOG5; 5-LO
Homo sapiens	RefSeq	NM_001040.2	ILMN_18112	SHBG	NM_001040.2	NM_001040.2		6462	7382459	NM_001040.2	SHBG	NP_001031.2	ILMN_1706579	0003800053	S	1159	ACTCACAGCTGCCCCCAGAGCCCAGGCAATGGCACTGACGCTTCCCATTA	17	+	7477345-7477394	17p13.1d	Homo sapiens sex hormone-binding globulin (SHBG), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]	The directed movement of hormones into, out of, within or between cells [goid 9914] [evidence NAS]	Interacting selectively with any androgen, male sex hormones [goid 5497] [pmid 2587256] [evidence TAS]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [evidence NAS]	MGC138391; MGC126834; ABP	MGC138391; MGC126834; ABP
Homo sapiens	RefSeq	XM_928406.1	ILMN_37301	LOC645364	XM_928406.1	XM_928406.1		645364	89041294	XM_928406.1	LOC645364	XP_933499.1	ILMN_1731929	0006280681	S	3444	TCCCATGGGTGAACCTGGAGGATACGTTATGTGAAAAACGTGAGGTACTG	17	+	20932090-20932139		PREDICTED: Homo sapiens hypothetical protein LOC645364 (LOC645364), mRNA.					
Homo sapiens	RefSeq	NM_153338.1	ILMN_9632	GGT6	NM_153338.1	NM_153338.1		124975	23503264	NM_153338.1	GGT6	NP_699169.1	ILMN_1788942	0001340154	S	2164	GCTCACTGCTGGCTCAGGCCCCAACCTCTGGCCTTTTAAGTTACCTAGAC	17	-	4407291-4407340	17p13.2c	Homo sapiens gamma-glutamyltransferase 6 homolog (rat) (GGT6), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of glutathione, the tripeptide glutamylcysteinylglycine, which acts as a coenzyme for some enzymes and as an antioxidant in the protection of sulfhydryl groups in enzymes and other proteins [goid 6750] [evidence IEA]	Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid [goid 3840] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	FLJ25990; FLJ90165	FLJ25990; FLJ90165
Homo sapiens	RefSeq	XR_015687.2	ILMN_169667	LOC729885	XR_015687.2	XR_015687.2		729885	169213421	XR_015687.2	LOC729885		ILMN_3306573	0000520347	M	734	GTTTGGCTCTTTTGAATAATCCCAGTCAGCTGGTGGTGAACATCTCTGCA	19	+	58618616-58618665	19q13.41b	PREDICTED: Homo sapiens misc_RNA (LOC729885), miscRNA.					
Homo sapiens	RefSeq	NM_024699.1	ILMN_23674	ZFAND1	NM_024699.1	NM_024699.1		79752	13375984	NM_024699.1	ZFAND1	NP_078975.1	ILMN_1730907	0007000037	S	1276	CATGTGGCCAAGCCTAGCATCATGGAGCCAGAAAGTATAGCCTTGCTGTC	8	-	82776980-82777029	8q21.13c	Homo sapiens zinc finger, AN1-type domain 1 (ZFAND1), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14007	FLJ14007
Homo sapiens	RefSeq	NM_024699.1	ILMN_23674	ZFAND1	NM_024699.1	NM_024699.1		79752	13375984	NM_024699.1	ZFAND1	NP_078975.1	ILMN_2087989	0007380707	S	1464	CTAGATTGGGGCATATTTCTGATAAAGACCCACCTCTAGTGAGATTCATC	8	-	82776792-82776841	8q21.13c	Homo sapiens zinc finger, AN1-type domain 1 (ZFAND1), mRNA.			Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ14007	FLJ14007
Homo sapiens	RefSeq	NM_001703.1	ILMN_174894	BAI2	NM_001703.2	NM_001703.2		576	115387098	NM_001703.2	BAI2	NP_001694.2	ILMN_1773109	0002370474	S	4979	AGAGCTGGAGCACCTTCAAATCTATGACACTGGGCTCGCTGCCCCCCAAG	1	-	32193104-32193153	1p35.2a	Homo sapiens brain-specific angiogenesis inhibitor 2 (BAI2), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; The process whose specific outcome is the progression of the peripheral nervous system over time, from its formation to the mature structure. The peripheral nervous system is one of the two major divisions of the nervous system. Nerves in the PNS connect the central nervous system (CNS) with sensory organs, other organs, muscles, blood vessels and glands [goid 7422] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 16527] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 16527] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 16527] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA];  [goid 16527] [evidence IEA]		
Homo sapiens	RefSeq	XM_927219.1	ILMN_32435	LOC643965	XM_927219.2	XM_927219.2		643965	113402523	XM_927219.2	LOC643965	XP_932312.2	ILMN_1810696	0006350129	S	179	TCGTCTACCTGGGATTCCTGTGCCACTCGAGGGTCCACCCCGCTCCGGGT	1	+	1351597-1351628:1352797-1352814	1p36.33a	PREDICTED: Homo sapiens hypothetical LOC643965 (LOC643965), mRNA.					
Homo sapiens	RefSeq	XM_933476.1	ILMN_171598	LOC732040	XM_001131684.1	XM_001131684.1		732040	113421931	XM_001131684.1	LOC732040	XP_001131684.1	ILMN_1665115	0002940634	S	61	GGCTCTGCCCTTCCCACTCCGGAGACTGCCCGCGCCCGGGACCGAATGAC					PREDICTED: Homo sapiens hypothetical protein LOC732040 (LOC732040), mRNA.					
Homo sapiens	RefSeq	NM_138791.1	ILMN_13083	C14ORF148	NM_138791.1	NM_138791.1		122945	20302039	NM_138791.1	C14orf148	NP_620146.1	ILMN_1740883	0005220546	S	397	CTGGTGAGTTGGGCCGATGTGATATTCCTCTGCTGCTTGCCGTCTCAGCT	14	-	77873891-77873940	14q24.3c	Homo sapiens chromosome 14 open reading frame 148 (C14orf148), transcript variant 2, mRNA.		The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins [goid 6561] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+ [goid 4735] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ32809	FLJ32809
Homo sapiens	RefSeq	XM_936283.1	ILMN_39813	LOC647331	XM_936283.1	XM_936283.1		647331	89065412	XM_936283.1	LOC647331	XP_941376.1	ILMN_1683491	0002900634	S	189	CAGAGGGAGTAGCACTGTTTGGGAAGACAGGGAACCTGAACTAGCAGTCA					PREDICTED: Homo sapiens hypothetical protein LOC647331 (LOC647331), mRNA.					
Homo sapiens	RefSeq	XM_001715274.1	ILMN_344851	LOC100133553	XM_001715274.1	XM_001715274.1		100133553	169166885	XM_001715274.1	LOC100133553	XP_001715326.1	ILMN_3243534	0006130133	S	529	GGCCCACAATTAGTGCCTTACTCTAGTGCTTATTCTGTTCAAGCTACTGG					PREDICTED: Homo sapiens hypothetical LOC100133553 (LOC100133553), partial mRNA.					
Homo sapiens	RefSeq	NM_001042702.1	ILMN_171380	DFNB59	NM_001042702.1	NM_001042702.1		494513	111607456	NM_001042702.1	DFNB59	NP_001036167.1	ILMN_2156687	0000580142	S	389	GCAAGTTGGAGATGGAGGGAGATTAGTTCCTGTTCCAAGCCTCAGTGAAG				2q31.2b	Homo sapiens deafness, autosomal recessive 59 (DFNB59), mRNA.				PJVK	PJVK
Homo sapiens	RefSeq	XM_933296.1	ILMN_34439	LOC645955	XM_933296.2	XM_933296.2		645955	113413227	XM_933296.2	LOC645955	XP_938389.1	ILMN_1660590	0007650593	S	1	ATGTTGGTGGTGGGGCGCGAGGAGCGGAAAAGCGCACTGCGCGGCGTGAG	2	-	120233982-120234031	2q14.2c	PREDICTED: Homo sapiens hypothetical LOC645955 (LOC645955), mRNA.					
Homo sapiens	RefSeq	NM_004317.2	ILMN_25830	ASNA1	NM_004317.2	NM_004317.2		439	50428937	NM_004317.2	ASNA1	NP_004308.2	ILMN_1657571	0004480435	S	1148	CCCATAATACAGGGGGAGCCACTTGGGCAGGAGGCAGGGAGGGGTCCATT	19	+	12720005-12720054	19p13.13c	Homo sapiens arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) (ASNA1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9736449] [evidence TAS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 9736449] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9736449] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9736449] [evidence TAS]; The directed movement of anions, atoms or small molecules with a net negative charge, into, out of, within or between cells [goid 6820] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides [goid 46685] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9736449] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of arsenite from one side of a membrane to the other [goid 15105] [pmid 8884272] [evidence TAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + arsenite(in) = ADP + phosphate + arsenite(out) [goid 15446] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	ARSA1; ARSA-I; MGC3821	MGC3821; ARSA1; ARSA-I
Homo sapiens	RefSeq	XM_058997.9	ILMN_40025	LOC653284	XM_058997.9	XM_058997.9		653284	89056739	XM_058997.9	LOC653284	XP_058997.6	ILMN_1672065	0002630475	A	436	CAGAGTTATCAGAGAAATCAGATGCCAGGTGGAGAGACAACAGGGTCATC	19	+	42179141-42179190		PREDICTED: Homo sapiens similar to zinc finger protein 420, transcript variant 1 (LOC653284), mRNA.					
Homo sapiens	RefSeq	NM_000174.2	ILMN_17159	GP9	NM_000174.2	NM_000174.2		2815	56676367	NM_000174.2	GP9	NP_000165.1	ILMN_1743290	0001050292	S	789	CCAAGCCTGGTCAGCCCAAACCACCAGAAGCCCAGAATAAACTGGCAGCT	3	+	130263874-130263923	3q21.3c	Homo sapiens glycoprotein IX (platelet) (GP9), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8608228] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10429193] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1939645] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 2771955] [evidence TAS]; The lipid bilayer surrounding the platelet alpha granule [goid 31092] [pmid 8608228] [evidence EXP]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 2771955] [evidence NAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [pmid 9432024] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD42a; GPIX	CD42a; GPIX
Homo sapiens	RefSeq	NM_001130406.1	ILMN_366044	PRR20D	NM_001130406.1	NM_001130406.1		729246	194353952	NM_001130406.1	PRR20D	NP_001123878.1	ILMN_3246169	0004150343	S	464	CCGGGGAGGAAGCCGGCGGCCAGGGCGAGGCCGTGGCAGAAGGGCTGGGC	13	+	57736404-57736453	13q21.1d	Homo sapiens proline rich 20D (PRR20D), mRNA.					
Homo sapiens	RefSeq	NM_003438.1	ILMN_41352	ZNF137	NM_003438.2	NM_003438.2		7696	89886462	NM_003438.2	ZNF137	NP_003429.1	ILMN_1723542	0002070152	S	2200	GTTGTGGGTTAGGGTTTCTCCCCCTCCCTCAGGATGACGCTAGTTAGCTG				19q13.41a	Homo sapiens zinc finger protein 137 (ZNF137), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7557990] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	pHZ-30; MGC119991; MGC119990	pHZ-30
Homo sapiens	RefSeq	NM_006045.1	ILMN_176431	ATP9A	NM_006045.1	NM_006045.1		10079	65301138	NM_006045.1	ATP9A	NP_006036.1	ILMN_2089073	0006480630	S	7507	CTGAGCGACTCTACTTTCATTGTTTGCCAGCGTGGCTCGTTGCTGTTGCC	20	-	50213337-50213386	20q13.2a	Homo sapiens ATPase, class II, type 9A (ATP9A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0611; ATPIIA	KIAA0611; ATPIIA
Homo sapiens	RefSeq	NM_006045.1	ILMN_176431	ATP9A	NM_006045.1	NM_006045.1		10079	65301138	NM_006045.1	ATP9A	NP_006036.1	ILMN_1799232	0002510156	S	5366	TCCCAGGAGGGGCTGAAGAAGCCATAGTTGGAAGTGGAAGGTACTCGTCA	20	-	50215478-50215527	20q13.2a	Homo sapiens ATPase, class II, type 9A (ATP9A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0611; ATPIIA	KIAA0611; ATPIIA
Homo sapiens	RefSeq	XM_927759.1	ILMN_176431	ATP9A	NM_006045.1	NM_006045.1		10079	65301138	NM_006045.1	ATP9A	NP_006036.1	ILMN_1706406	0005860603	S	5423	CCACAAACCTTTTTACTCTGTTGTCTCAGCCGCACTGGGGCGGAGGCGGT	20	-	50215421-50215470	20q13.2a	Homo sapiens ATPase, class II, type 9A (ATP9A), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of phospholipids into, out of, within or between cells. Phospholipids are any lipids containing phosphoric acid as a mono- or diester [goid 15914] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the movement of phospholipids from one membrane face to the other ('flippase' activity), driven by the hydrolysis of ATP [goid 4012] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	KIAA0611; ATPIIA	
Homo sapiens	RefSeq	XM_930235.1	ILMN_40295	FAM91A2	XM_930235.1	XM_930235.1		57234	88943462	XM_930235.1	FAM91A2	XP_935328.1	ILMN_1784465	0004830730	I	2351	TTGACTAACAGCCTGAAAATATTAATCTTTCCTCTCAGTCTGAGCAAGTG	1	+	147860260-147860309	1q21.1e	PREDICTED: Homo sapiens family with sequence similarity 91, member A2, transcript variant 1 (FAM91A2), mRNA.					
Homo sapiens	RefSeq	NM_004899.3	ILMN_15658	BRE	NM_004899.3	NM_004899.3		9577	40353762	NM_004899.3	BRE	NP_004890.2	ILMN_1658805	0006900367	I	1382	GGCCTCCTTGGAGGGCCTCAGAGGGAGAGAGAACTGCTCAGTAATTTTGA	2	+	28248140-28248189	2p23.2b	Homo sapiens brain and reproductive organ-expressed (TNFRSF1A modulator) (BRE), transcript variant 1, mRNA.	A ubiquitin ligase complex found in the nucleus [goid 152] [pmid 14636569] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 15465831] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15465831] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 7826398] [evidence IEP]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9737713] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of anti-apoptosis [goid 45768] [pmid 15465831] [evidence IDA]	Interacting selectively with a peroxisomal targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome [goid 268] [pmid 11676476] [evidence TAS]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [pmid 15465831] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15465831] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14636569] [evidence IPI]	BRCC45; BRCC4	BRCC45; BRCC4
Homo sapiens	RefSeq	XM_930225.1	ILMN_35416	LOC647191	XM_930225.1	XM_930225.1		647191	89040304	XM_930225.1	LOC647191	XP_935318.1	ILMN_1784349	0004050608	S	711	ACCAGCCCTCACCTTGGGCAGGATTTGTGGGGTGAGGAAACCGAAGGCCT	16	-	32946029-32946048:32946167-32946196		PREDICTED: Homo sapiens similar to Kinase suppressor of ras-1 (Kinase suppressor of ras) (mKSR1) (Hb protein) (LOC647191), mRNA.					
Homo sapiens	Unigene	Hs.568640	ILMN_120821	HS.568640	Hs.568640		Hs.568640		18985118	BM675220			ILMN_1842740	0000060730	S	619	GGAACAGGAAACTCCTTAAGATTCTCTCCTCTGCGAATATGGATGCTCCC					UI-E-EJ0-ahr-m-24-0-UI.s1 UI-E-EJ0 Homo sapiens cDNA clone UI-E-EJ0-ahr-m-24-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_139057.1	ILMN_174618	ADAMTS17	NM_139057.2	NM_139057.2		170691	110611169	NM_139057.2	ADAMTS17	NP_620688.2	ILMN_1682989	0004040494	S	3176	AACGCCAACACCATCACCTCCCCCCGCCTTGCTGCTCTGACCTACAAATG	15	-	100514748-100514767:100516250-100516279	15q26.3c	Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 17 (ADAMTS17), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity [goid 5578] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions [goid 4222] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ16363; FLJ32769	FLJ32769
Homo sapiens	RefSeq	XR_018203.2	ILMN_177495	LOC644563	XR_018203.2	XR_018203.2		644563	169216385	XR_018203.2	LOC644563		ILMN_3207122	0004290102	A	317	GGACAGCTGTGTCTTTGCTGGGGAGTATGAAGACACTCTTGGGACCTGTG				Xq22.3b	PREDICTED: Homo sapiens misc_RNA (LOC644563), miscRNA.					
Homo sapiens	RefSeq	NM_005630.1	ILMN_14229	SLCO2A1	NM_005630.1	NM_005630.1		6578	5032094	NM_005630.1	SLCO2A1	NP_005621.1	ILMN_1705231	0000430161	S	3831	GGTTCTGCTTGGAAAATGATGCCCTGCAACTAACCCTGGTCTTTCCCATG	3	-	135134380-135134429	3q22.1e	Homo sapiens solute carrier organic anion transporter family, member 2A1 (SLCO2A1), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8787677] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8787677] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [pmid 8787677] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Enables the directed movement of lipids into, out of, within or between cells [goid 5319] [pmid 8787677] [evidence TAS]	OATP2A1; PGT; SLC21A2	OATP2A1; PGT; SLC21A2
Homo sapiens	RefSeq	NR_000013.1	ILMN_1411	SNORD42B	NR_000013.1	NR_000013.1		26808	22546024	NR_000013.1	SNORD42B		ILMN_1810762	0001410725	S	18	GTTTTAATCTCCTGACACTTGTGATGTCTTCAAAGGAACCACTGATGCAC	17	+	24071712-24071761	17q11.2a	Homo sapiens small nucleolar RNA, C/D box 42B (SNORD42B), small nucleolar RNA.				RNU42B; U42B	RNU42B; U42B
Homo sapiens	RefSeq	XM_926748.1	ILMN_31102	LOC643416	XM_926748.1	XM_926748.1		643416	89029365	XM_926748.1	LOC643416	XP_931841.1	ILMN_1730401	0002190152	S	2977	TTTTTTGCCTGGAGGCAGATATTTTGCCACATGGCTATTTATGAAACTGT	9	+	45255725-45255774	9p11.2b	PREDICTED: Homo sapiens similar to CDK2-associated protein 2 (LOC643416), mRNA.					
Homo sapiens	RefSeq	NM_001004137.1	ILMN_18816	OR52M1	NM_001004137.1	NM_001004137.1		119772	51921274	NM_001004137.1	OR52M1	NP_001004137.1	ILMN_1725686	0003520082	S	859	CCTCCAATCCTCAATCCCATTGTCTATGCTGTTCGCACCAAGCAGATCCG	11	+	4523855-4523904	11p15.4d	Homo sapiens olfactory receptor, family 52, subfamily M, member 1 (OR52M1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR52M1P; OR11-11; OR52M3P	OR52M1P; OR11-11; OR52M3P
Homo sapiens	RefSeq	XM_372302.3	ILMN_43124	TAKR	XM_372302.3	XM_372302.3		389932	89030770	XM_372302.3	tAKR	XP_372302.3	ILMN_2290896	0002640121	I	859	CTGACACCAGAGGACATGAAAACCACAGATGGCTTGAACAAGAATATATG	10	-	4908180-4908229	10p15.1d	PREDICTED: Homo sapiens aldo-keto reductase, truncated (tAKR), mRNA.					
Homo sapiens	RefSeq	NM_001007523.1	ILMN_24925	F8A2	NM_001007523.1	NM_001007523.1		474383	56090587	NM_001007523.1	F8A2	NP_001007524.1	ILMN_3247893	0001340674	S	235	GCGCTCTTCCACGGGCCCGGGGAGGCGCTGGCCCTCACCGAGGCCGCCCG	X	+	154265192-154265241	Xq28h	Homo sapiens coagulation factor VIII-associated (intronic transcript) 2 (F8A2), mRNA.					
Homo sapiens	Unigene	Hs.553217	ILMN_111287	HS.553217	Hs.553217		Hs.553217		81178413	DA645971			ILMN_1863484	0000940750	S	502	CTATAGCTGCAGGTACAAGAGTGACCCAGTGACACCAGCAGATGAACCGG	11	-	63697861-63697910		DA645971 MAMMA1 Homo sapiens cDNA clone MAMMA1000318 5, mRNA sequence					
Homo sapiens	RefSeq	NM_002114.1	ILMN_171533	HIVEP1	NM_002114.2	NM_002114.2		3096	116805341	NM_002114.2	HIVEP1	NP_002105.2	ILMN_1735548	0004670500	S	8287	GCGACGTGAGCAGCGATGATGACGAGGACAGGCTTGTGATAGCAACCTGA	6	+	12164426-12164475	6p24.1b	Homo sapiens human immunodeficiency virus type I enhancer binding protein 1 (HIVEP1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 2106471] [evidence TAS]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2106471] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16713569] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	CRYBP1; PRDII-BF1; CIRIP; MBP-1; ZNF40	CRYBP1; PRDII-BF1; CIRIP; MBP-1; ZNF40
Homo sapiens	RefSeq	NM_005966.3	ILMN_18998	NAB1	NM_005966.3	NM_005966.3		4664	56550107	NM_005966.3	NAB1	NP_005957.2	ILMN_1774617	0006250040	S	4008	CTTCCAACTTCCAATATTTATCCATTCGTTGTGGACCCACAGATTGCATC	2	+	191265276-191265325	2q32.2b	Homo sapiens NGFI-A binding protein 1 (EGR1 binding protein 1) (NAB1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8668170] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The formation of bone by the replacement of cartilage tissue with mineralized bone [goid 1958] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 8668170] [evidence NAS]; The process whereby a relatively unspecialized cell acquires the specialized features of a Schwann cell. Schwann cells are found in the peripheral nervous system, where they insulate neurons and axons, and regulate the environment in which neurons function [goid 14037] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The process by which myelin sheaths are formed and maintained around neurons. Oligodendrocytes in the brain and spinal cord and Schwann cells in the peripheral nervous system wrap axons with compact layers of their plasma membrane. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 42552] [evidence IEA]; Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of epidermis development [goid 45682] [evidence IEA]	Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 8668170] [evidence NAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]		
Homo sapiens	RefSeq	XM_001714786.1	ILMN_335793	CTGLF7	XM_001714786.1	XM_001714786.1		728127	169190077	XM_001714786.1	CTGLF7	XP_001714838.1	ILMN_3236344	0001400026	S	280	TCTGCCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCATGTGAAACTGA	10	-	46634941-46634990	10q11.22a	PREDICTED: Homo sapiens centaurin, gamma-like family, member 7 (CTGLF7), mRNA.		Any process that modulates the activity of the GTPase ARF [goid 32312] [evidence IEA]	Increases the rate of GTP hydrolysis by the GTPase ARF [goid 8060] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001090027.1	ILMN_307978	LOC644907	NM_001090027.1	NM_001090027.1		644907	147900595	NM_001090027.1	LOC644907	NP_001083496.1	ILMN_3241051	0007150689	S	421	ACCAACCCCAATGCCAGGCTGCGCAGCGAAGAAAATGAGTAGACAGCTCG	7	+	44474387-44474428:44474429-44474436	7p13d	Homo sapiens hCG18290 (LOC644907), mRNA.					
Homo sapiens	RefSeq	NM_013959.1	ILMN_23389	NRG1	NM_013959.2	NM_013959.2		3084	116006960	NM_013959.2	NRG1	NP_039253.1	ILMN_1731788	0000240093	I	1282	CCTTCACCCACCCGGAACCCTGAGGTGAGAACGCCCAAGTCAGCAACTCA	8	+	32625352-32625401	8p12d	Homo sapiens neuregulin 1 (NRG1), transcript variant SMDF, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1348215] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8096067] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 1350381] [evidence NAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 11389077] [evidence IDA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [pmid 12646923] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The region of the plasma membrane located at the apical end of the cell [goid 16324] [pmid 12646923] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 9553078] [evidence IDA]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [pmid 17432114] [evidence TAS]; The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand [goid 7169] [pmid 7514177] [evidence IDA]; Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity [goid 7171] [pmid 9553078] [evidence IDA]; The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell [goid 7219] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 17432114] [evidence TAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 11389077] [evidence IDA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process aimed at the progression of a neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell [goid 14032] [pmid 17432114] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 15073182] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [pmid 9553078] [evidence IDA]; The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk [goid 30879] [pmid 17432114] [evidence TAS]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 12646923] [evidence IDA]; The series of events that restore integrity to a damaged tissue, following an injury [goid 42060] [pmid 16412517] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer [goid 43496] [pmid 16412517] [evidence TAS]; Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer [goid 43497] [pmid 10559227] [evidence IDA]; The disaggregation of a protein complex into its constituent components, occurring at the level of an individual cell. Protein complexes may have other associated non-protein prosthetic groups, such as nucleic acids, metal ions or carbohydrate groups [goid 43624] [pmid 15155732] [evidence IGI]; Any process that activates or increases the frequency, rate or extent of cell adhesion [goid 45785] [pmid 7556068] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of the regulated release of a substance from a cell or group of cells [goid 51048] [pmid 10559227] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of striated muscle cell differentiation [goid 51155] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction [goid 55007] [evidence ISS]; The process whereby a relatively unspecialized cell acquires specialized features of a cardiac muscle cell. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The ventricle is the part of the heart that pumps blood away from the organ [goid 55012] [pmid 9553078] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of cardiac muscle cell proliferation [goid 60045] [pmid 9553078] [evidence IDA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of cell growth [goid 30307] [pmid 10372964] [evidence TAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 15073182] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 11389077] [evidence IDA]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [pmid 8096067] [evidence NAS]; Increases the activity of a protein tyrosine kinase, an enzyme which phosphorylates a tyrosyl phenolic group on a protein [goid 30296] [pmid 7556068] [evidence IDA];  [goid 30297] [pmid 9553078] [evidence IC ];  [goid 30297] [pmid 1348215] [evidence NAS];  [goid 30297] [pmid 1350381] [evidence NAS]; Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [pmid 1348215] [evidence NAS]; Interacting selectively with a receptor that possesses protein tyrosine kinase activity [goid 30971] [pmid 1350381] [evidence NAS]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 7556068] [evidence IDA]; Interacting selectively with the protein-tyrosine kinase receptor ErbB-3/HER3 [goid 43125] [pmid 11389077] [evidence IPI]; Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [pmid 10372964] [evidence TAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]	HRG; GGF2; HGL; GGF; NDF; HRGA; HRG1; SMDF; ARIA	HRG; GGF2; HGL; GGF; NDF; HRGA; HRG1; SMDF; ARIA
Homo sapiens	Unigene	Hs.447508	ILMN_93299	HS.447508	Hs.447508		Hs.447508		42660194	XM_378421			ILMN_1911677	0000110332	S	3208	AAGGCTGTGGGGCCCGATACCATGATTTTGCTGCACTCCTAGACCTGGCC					PREDICTED: Homo sapiens hypothetical LOC400144 (LOC400144), mRNA					
Homo sapiens	RefSeq	NM_022735.3	ILMN_14917	ACBD3	NM_022735.3	NM_022735.3		64746	29550827	NM_022735.3	ACBD3	NP_073572.2	ILMN_1665945	0005890112	S	3136	CCCAGCTCATAGGTGTTCATACTGTTACATCCAGAACATTTGTCAGGCTC	1	-	226332759-226332808	1q42.12c	Homo sapiens acyl-Coenzyme A binding domain containing 3 (ACBD3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification [goid 6694] [evidence IEA]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Interacting selectively with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group [goid 62] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17711851] [evidence IPI]	GOLPH1; PAP7; GOCAP1; GCP60	GOLPH1; PAP7; GOCAP1; GCP60
Homo sapiens	RefSeq	NM_025222.2	ILMN_1229	WDR82	NM_025222.3	NM_025222.3		80335	147904339	NM_025222.3	WDR82	NP_079498.2	ILMN_1679655	0005360086	S	3352	CTTCACATATCTGCAACCAGAGCAGCCACCAAGCATTACTTAGCAGCAGG	3	-	52289328-52289377	3p21.1d	Homo sapiens WD repeat domain 82 (WDR82), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]			MST107; PRO2730; WDR82A; TMEM113; PRO34047; SWD2; MSTP107	MST107; PRO2730; PRO34047; MSTP107
Homo sapiens	RefSeq	NM_001009182.1	ILMN_5662	SIP1	NM_001009182.1	NM_001009182.1		8487	57165349	NM_001009182.1	SIP1	NP_001009182.1	ILMN_2344007	0007040609	A	181	GAGGCGGGTCCAGATCGAAGCAGCTCAATGTCCAGATGTTGTGGTAGCTC	14	+	38653419-38653430:38653784-38653821	14q21.1b	Homo sapiens survival of motor neuron protein interacting protein 1 (SIP1), transcript variant beta, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9323130] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9323129] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9323130] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9323129] [evidence TAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9323129] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9323129] [evidence TAS]	GEMIN2; SIP1-delta	GEMIN2; SIP1-delta
Homo sapiens	RefSeq	NM_001009182.1	ILMN_5662	SIP1	NM_001009182.1	NM_001009182.1		8487	57165349	NM_001009182.1	SIP1	NP_001009182.1	ILMN_2344002	0005360326	A	664	GGCTCATTCACTGATTCGGCAGCTTGCAAGAAGGTGCTCTGAAGTGAGGC	14	+	38670966-38671015	14q21.1b	Homo sapiens survival of motor neuron protein interacting protein 1 (SIP1), transcript variant beta, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9323130] [evidence TAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10531003] [evidence EXP]; A ribonucleoprotein complex, containing RNA and small nuclear ribonucleoproteins (snRNPs) that is assembled during the splicing of messenger RNA primary transcript to excise an intron [goid 5681] [pmid 9323129] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9323130] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10531003] [evidence EXP]	The aggregation, arrangement and bonding together of the spliceosome, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions [goid 245] [pmid 9323129] [evidence TAS]; The formation and assembly from one or more snRNA and multiple protein components of a ribonucleoprotein complex that in involved in formation of the spliceosome [goid 387] [pmid 15130578] [evidence EXP]; The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA [goid 8380] [pmid 9323129] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11714716] [evidence IPI]; An activity which assists splicing of substrate RNA(s) by facilitating the formation and stabilization of a series of catalytic conformations in which key RNA sequences are positioned for a series of two transesterification reactions which result in removal of the intron sequence and joining of two exons [goid 31202] [pmid 9323129] [evidence TAS]	GEMIN2; SIP1-delta	GEMIN2; SIP1-delta
Homo sapiens	RefSeq	NM_002761.1	ILMN_25311	PRM1	NM_002761.2	NM_002761.2		5619	121582462	NM_002761.2	PRM1	NP_002752.1	ILMN_1675543	0004010471	S	117	GTCGCAGCCAGAGCCGGAGCAGATATTACCGCCAGAGACAAAGAAGTCGC	16	-	11375026-11375075	16p13.13c	Homo sapiens protamine 1 (PRM1), mRNA.	A complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures [goid 786] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 2081589] [evidence TAS]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process by which DNA and associated proteins are formed into a compact, orderly structure [goid 6323] [pmid 2081589] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nucleus [goid 6997] [evidence IEA]; The cell cycle process whereby chromatin structure is compacted prior to mitosis in eukaryotic cells [goid 7076] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 2081589] [evidence TAS]; The process whose specific outcome is the progression of a male gamete over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell [goid 7286] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 2081589] [evidence TAS]	P1	P1
Homo sapiens	RefSeq	NM_005773.2	ILMN_29477	ZNF256	NM_005773.2	NM_005773.2		10172	37574602	NM_005773.2	ZNF256	NP_005764.2	ILMN_1757408	0004390349	S	2119	AAGGTTAGGTAACACACATAGGGCTGTTACGGACTGAGAAGTGTCCCTGC	19	-	63144054-63144103	19q13.43c	Homo sapiens zinc finger protein 256 (ZNF256), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10585455] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10585455] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	BMZF-3; BMZF3	BMZF-3; BMZF3
Homo sapiens	RefSeq	NM_177966.4	ILMN_182612	PDE12	NM_177966.4	NM_177966.4		201626	68051727	NM_177966.4	PDE12	NP_808881.2	ILMN_1660305	0003060154	S	3582	AGCCCACTCCCTTCAAGAAAAGCTTTGATTTTCCCCAGTCATGAAAGCCC	3	+	57522420-57522469	3p14.3a	Homo sapiens phosphodiesterase 12 (PDE12), mRNA.			Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]		2'-PDE
Homo sapiens	RefSeq	XM_934565.1	ILMN_46695	LOC647244	XM_945394.1	XM_945394.1		647244	88971318	XM_945394.1	LOC647244	XP_950487.1	ILMN_1660103	0003180138	S	175	GGGCAGCGCTGCTCCGGCCCTAGCGCTCCCGGACGCTGTGCTGGGCCGAC				3q26.32c	PREDICTED: Homo sapiens hypothetical LOC647244 (LOC647244), mRNA.					
Homo sapiens	RefSeq	NM_014503.1	ILMN_7277	UTP20	NM_014503.1	NM_014503.1		27340	7657040	NM_014503.1	UTP20	NP_055318.1	ILMN_1691947	0006510095	S	4613	GTGATAATGCCAGCATGTGCCTGATGAGTATCATCAAAAAGCTACCTGCC	12	+	100262523-100262572	12q23.2a	Homo sapiens UTP20, small subunit (SSU) processome component, homolog (yeast) (UTP20), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A complex composed of RNA of the small nucleolar RNA (snoRNA) and protein, found in the nucleolus of a eukaryotic cell. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type [goid 5732] [pmid 15590835] [evidence ISS]	Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9673349] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16053918] [evidence IPI]	DRIM	DRIM
Homo sapiens	RefSeq	NM_001008728.1	ILMN_23728	HMGB4	NM_001008728.1	NM_001008728.1		127540	57232747	NM_001008728.1	HMGB4	NP_001008728.1	ILMN_2348031	0002750215	A	447	GCCAAGGCCACAGGGAAGATGTGGTCAACAGCGACAGACCTGGAGAAGCA	1	+	34102749-34102798	1p35.1a	Homo sapiens high-mobility group box 4 (HMGB4), transcript variant 2, mRNA.	The ordered and organized complex of DNA and protein that forms the chromosome [goid 785] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]	FLJ40388; dJ1007G16.5; MGC88128	FLJ40388; dJ1007G16.5; MGC88128
Homo sapiens	RefSeq	NM_004381.3	ILMN_21310	CREBL1	NM_004381.3	NM_004381.3		1388	20631976	NM_004381.3	CREBL1	NP_004372.3	ILMN_1814313	0003940348	S	2257	GCAGGTGTGGGGGTTAAGCACTTATTTGAGGTGGGGGTGTTCACCTCTCT	6	-	32191200-32191237:32191494-32191505	6p21.32b	Homo sapiens cAMP responsive element binding protein-like 1 (CREBL1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 8870652] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8586413] [evidence TAS]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [pmid 8586413] [evidence TAS]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8586413] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8586413] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	FLJ10066; G13; CREB-RP	FLJ10066; G13; CREB-RP
Homo sapiens	RefSeq	XR_039630.1	ILMN_347588	LOC644761	XR_039630.1	XR_039630.1		644761	169208916	XR_039630.1	LOC644761		ILMN_3290211	0004490753	M	1028	TAAGGGTTGGTTTTCCGTACTCCAAACCATCAGGTGGACACAGTCCTAGG				15q22.2a	PREDICTED: Homo sapiens misc_RNA (LOC644761), miscRNA.					
Homo sapiens	RefSeq	XM_001719014.1	ILMN_350624	LOC100133169	XM_001719014.1	XM_001719014.1		100133169	169171868	XM_001719014.1	LOC100133169	XP_001719066.1	ILMN_3293730	0007510338	M	71	GTACCAAGCTTAGTATTTTTATTGAGCTCAGAAAGCCTGTGGTCCCCAGT				7q22.2a	PREDICTED: Homo sapiens hypothetical protein LOC100133169 (LOC100133169), mRNA.					
Homo sapiens	RefSeq	XM_934634.1	ILMN_42781	LOC339692	XM_934634.1	XM_934634.1		339692	88953489	XM_934634.1	LOC339692	XP_939727.1	ILMN_1741740	0004670373	I	1123	GTATCTTCCTCCTCTGCCATCCACAGTGTCATCTTCACCCAAGGTGGCTG	2	-	110626320-110626369		PREDICTED: Homo sapiens hypothetical protein LOC339692, transcript variant 4 (LOC339692), mRNA.					
Homo sapiens	RefSeq	NM_012267.2	ILMN_19625	HSPBP1	NM_012267.3	NM_012267.3		23640	112363069	NM_012267.3	HSPBP1	NP_036399.3	ILMN_1769902	0001340228	A	535	CTGGAGCTGCTGGCCGACCTGTGTGAGAACATGGACAATGCCGCAGACTT	19	-	60477798-60477802:60480822-60480866	19q13.42b	Homo sapiens hsp70-interacting protein (HSPBP1), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9830037] [evidence TAS]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [pmid 9830037] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]		
Homo sapiens	RefSeq	XM_938008.1	ILMN_19625	HSPBP1	NM_012267.3	NM_012267.3		23640	112363069	NM_012267.3	HSPBP1	NP_036399.3	ILMN_1678949	0005360220	A	537	GGAGCTGCTGGCCGACCTGTGTGAGAACATGGACAATGCCGCAGACTTCT	19	-	60477796-60477802:60480822-60480864	19q13.42b	Homo sapiens hsp70-interacting protein (HSPBP1), mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9830037] [evidence TAS]	Stops, prevents or reduces the activity of an enzyme [goid 4857] [pmid 9830037] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16169070] [evidence IPI]		
Homo sapiens	RefSeq	NM_178523.3	ILMN_163592	ZNF616	NM_178523.3	NM_178523.3		90317	49574542	NM_178523.3	ZNF616	NP_848618.2	ILMN_1719219	0000150291	S	2799	GTAGCGTCATCCCCTTGGTGCTGTCCTGGCAATAGTGACTTCTCTTGAGG	19	-	57309663-57309712	19q13.33e	Homo sapiens zinc finger protein 616 (ZNF616), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC149778; MGC45556	MGC149778; MGC45556
Homo sapiens	Unigene	Hs.55047	ILMN_73037	HS.55047	Hs.55047		Hs.55047		13719084	BG197397			ILMN_1910511	0005260411	S	81	GCATGCCACGTGAACAGAAGTTCCAGGAGACAGAAGAGAGGGGTGACAAG	10	+	80104535-80104584		RST16640 Athersys RAGE Library Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_001080444.1	ILMN_171639	IGSF5	NM_001080444.1	NM_001080444.1		150084	122937284	NM_001080444.1	IGSF5	NP_001073913.1	ILMN_2344221	0006550681	A	1965	GAGGATGGACCTCACCTACTCCGCACACCGTGAAAAAACTGGAAATGGGC	21	+	40095792-40095841	21q22.2b	Homo sapiens immunoglobulin superfamily, member 5 (IGSF5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A belt-like region of very close contact between the plasma membranes of adjacent cells so that the intercellular space is completely occluded. They occur in epithelia and brain endothelia [goid 5923] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]			JAM4; GSF5; IGSF5	JAM4; GSF5; IGSF5
Homo sapiens	RefSeq	XM_942432.1	ILMN_41409	LOC652781	XM_942432.1	XM_942432.1		652781	89077456	XM_942432.1	LOC652781	XP_947525.1	ILMN_1660362	0002490477	S	100	CCTGAGATGCTGAGACTCCTGTCCCATCAGAACCTGCCCACCCTGTCCAT					PREDICTED: Homo sapiens similar to Arachidonate 5-lipoxygenase (5-lipoxygenase) (5-LO) (LOC652781), mRNA.					
Homo sapiens	RefSeq	XR_018154.1	ILMN_176459	LOC401076	XR_018154.1	XR_018154.1		401076	113415121	XR_018154.1	LOC401076		ILMN_3281155	0000580092	M	1346	GAACAGTTCAAGACCCTACAGCATGGGCAGAAGTTGGTCACCACAGTGAC				3p12.3c	PREDICTED: Homo sapiens misc_RNA (LOC401076), miscRNA.					
Homo sapiens	RefSeq	NR_003016.1	ILMN_167059	SNORA26	NR_003016.1	NR_003016.1		677810	92859580	NR_003016.1	SNORA26		ILMN_3238613	0002570609	S	1	GTGCCCTTTTAAGGTTGACCCAGTGCTTTAAGAGGCTAACACAGAAGGGT	4	+	53274173-53274222	4q12a	Homo sapiens small nucleolar RNA, H/ACA box 26 (SNORA26), small nucleolar RNA.				HBI-6	HBI-6
Homo sapiens	Unigene	Hs.124547	ILMN_76042	HS.124547	Hs.124547		Hs.124547		2933358	AA845599			ILMN_1836543	0001470048	S	365	TTCTGACTCCAAGTCCAGTGTTCTCTCCTTGTAACCATTCAGGGCAACGG	8	+	94997484-94997533		ak04h01.s1 Soares_parathyroid_tumor_NbHPA Homo sapiens cDNA clone IMAGE:1405009 3, mRNA sequence					
Homo sapiens	RefSeq	XR_038435.1	ILMN_347219	LOC100134435	XR_038435.1	XR_038435.1		100134435	169217482	XR_038435.1	LOC100134435		ILMN_3245360	0001710008	S	306	TTGTGCTCCCAGTCTCGCAGAACCAGGGCCAGGTATCCCTGTGGCTGTGG					PREDICTED: Homo sapiens misc_RNA (LOC100134435), miscRNA.					
Homo sapiens	RefSeq	NM_001004354.1	ILMN_26323	NRARP	NM_001004354.1	NM_001004354.1		441478	51972283	NM_001004354.1	NRARP	NP_001004354.1	ILMN_1697666	0003830201	I	337	AGCTGTCCACCTGCTCCGCGCCGCAGACGCAGCGCATCTTCCAGGAGGCT	9	-	139316138-139316187	9q34.3f	Homo sapiens Notch-regulated ankyrin repeat protein (NRARP), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		MGC61598	MGC61598
Homo sapiens	RefSeq	XM_939432.1	ILMN_26323	NRARP	NM_001004354.1	NM_001004354.1		441478	51972283	NM_001004354.1	NRARP	NP_001004354.1	ILMN_1692733	0002940386	A	1363	CATTTCTTGGTTGCACTGAAAATACCGCCCAGCCTGATGGTGTTCCCGTG	9	-	139315112-139315161	9q34.3f	Homo sapiens Notch-regulated ankyrin repeat protein (NRARP), mRNA.		The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]		MGC61598	
Homo sapiens	RefSeq	XM_001715084.1	ILMN_340935	LOC100132426	XM_001715084.1	XM_001715084.1		100132426	169174842	XM_001715084.1	LOC100132426	XP_001715136.1	ILMN_3240397	0004070754	S	1089	GGAATTTGTACAGCAAAAGAGAAGCTATTCTCAGTATTTCAAGGAGAAAT	9	-	69634098-69634147	9q12j	PREDICTED: Homo sapiens similar to hCG1742442 (LOC100132426), mRNA.					
Homo sapiens	RefSeq	NM_024749.2	ILMN_3016	VASH2	NM_024749.2	NM_024749.2		79805	31982920	NM_024749.2	VASH2	NP_079025.2	ILMN_1692698	0003830129	S	3346	GCCAACTGGCTTGATGGTTCAATTAGTAAGCTAATTTCTCCCACACCCGC	1	+	211230649-211230698	1q32.3c	Homo sapiens vasohibin 2 (VASH2), mRNA.				RP11-275G3.1; FLJ12505	RP11-275G3.1; FLJ12505
Homo sapiens	RefSeq	XM_001717255.1	ILMN_340291	LOC100134100	XM_001717255.1	XM_001717255.1		100134100	169161728	XM_001717255.1	LOC100134100	XP_001717307.1	ILMN_3239885	0007000653	S	1517	GGAGCTGTGGGATGATCTCTGTGAAGATTATTTGCCTCTCCGGGTCCAGC					PREDICTED: Homo sapiens similar to Phosphodiesterase 4D interacting protein (myomegalin) (LOC100134100), mRNA.					
Homo sapiens	RefSeq	NM_002382.3	ILMN_7406	MAX	NM_002382.3	NM_002382.3		4149	21704260	NM_002382.3	MAX	NP_002373.3	ILMN_2363426	0003180133	A	267	CGAAAACGTAGGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTC	14	-	65560450-65560499	14q23.3a	Homo sapiens MYC associated factor X (MAX), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 45449] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 8425218] [evidence TAS]	Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 2006410] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 2006410] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418410] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17157259] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17274640] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17418410] [evidence IPI]	MGC34679; MGC36767; MGC11225; MGC10775; orf1; MGC18164	MGC34679; MGC36767; MGC11225; MGC10775; orf1; MGC18164
Homo sapiens	RefSeq	XR_015137.1	ILMN_169002	LOC727828	XR_015137.1	XR_015137.1		727828	113422530	XR_015137.1	LOC727828		ILMN_3220082	0000520537	A	148	TGCGCTGCCCTTCGTGCAGAAAAACCTCAGAGAAGCCCAACTTCAACACC	11	+	89149944-89149993	11q14.3b	PREDICTED: Homo sapiens misc_RNA (LOC727828), miscRNA.					
Homo sapiens	RefSeq	XR_015137.1	ILMN_169002	LOC727828	XR_015137.1	XR_015137.1		727828	113422530	XR_015137.1	LOC727828		ILMN_3296610	0004890037	M	8	CTGATGCCCTGCGAGTCTTCCAGAATGAGCTCATTTGCTGCATTTGCGTG	11	+	89149804-89149853	11q14.3b	PREDICTED: Homo sapiens misc_RNA (LOC727828), miscRNA.					
Homo sapiens	RefSeq	XM_001715263.1	ILMN_340719	LOC100131435	XM_001715263.1	XM_001715263.1		100131435	169206276	XM_001715263.1	LOC100131435	XP_001715315.1	ILMN_3282632	0006940743	M	2930	TACGTTGAAGAATCTTGTCTCTTTCAGTTTTGTTTCCTGTGGCGTGTTGC				13q34a	PREDICTED: Homo sapiens hypothetical LOC100131435 (LOC100131435), mRNA.					
Homo sapiens	RefSeq	NM_003977.1	ILMN_13720	AIP	NM_003977.1	NM_003977.1		9049	4502008	NM_003977.1	AIP	NP_003968.1	ILMN_2103841	0000610689	S	1099	TTCTCCCATTGACAGGAGCACTTGGCCCTGCCTTACCTGCCAAGCCCACT	11	+	67015037-67015040:67015041-67015086	11q13.1f	Homo sapiens aryl hydrocarbon receptor interacting protein (AIP), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8972861] [evidence TAS]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 14557246] [evidence TAS]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence IEA]; The chemical reactions and pathways involving a xenobiotic compound, a compound foreign to living organisms. Used of chemical compounds, e.g. a xenobiotic chemical, such as a pesticide [goid 6805] [evidence IEA]; The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that results in the attainment of the full functional capacity of a protein [goid 22417] [pmid 14557246] [evidence IDA]; The directed movement of a protein from the cytoplasm to the mitochondrion [goid 43681] [pmid 14557246] [evidence IDA]	The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9447995] [evidence TAS]; Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell [goid 4871] [pmid 9111057] [evidence TAS]; Interacting selectively with an unfolded protein [goid 51082] [pmid 14557246] [evidence IDA]	ARA9; FKBP16; XAP2; SMTPHN; FKBP37	FKBP16; FKBP37; ARA9; XAP2; SMTPHN
Homo sapiens	RefSeq	NM_133376.1	ILMN_11529	ITGB1	NM_133376.1	NM_133376.1		3688	19743822	NM_133376.1	ITGB1	NP_596867.1	ILMN_1784454	0004040491	I	84	GGCCCGAACGGCCCCTGACACCTGCGGTCTCCCGCCGGGCTGGGCAAGCG	10	-	33286695-33286744	10p11.22b	Homo sapiens integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) (ITGB1), transcript variant 1E, mRNA.	Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 11919189] [evidence TAS]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [pmid 9552005] [evidence NAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 1715889] [evidence IDA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [pmid 9415431] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [pmid 9415431] [evidence IDA]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; A protein complex that is composed of one alpha subunit and one beta subunit, both of which are members of the integrin superfamily of cell adhesion receptors; the complex spans the plasma membrane and binds to extracellular matrix ligands, cell-surface ligands, and soluble ligands [goid 8305] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any of the discrete particles (nerve-ending particles) formed from the clublike presynaptic nerve endings that resist disruption and are snapped or torn off their attachments when brain tissue is homogenized in media isosmotic to plasma [goid 19717] [evidence IEA]; The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible of the muscle contraction [goid 31594] [evidence IEA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]	Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; A defense response that is mediated by cells [goid 6968] [pmid 10201960] [evidence TAS]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 10201960] [evidence TAS]; The attachment of a leukocyte to another cell via adhesion molecules [goid 7159] [pmid 1715889] [evidence IDA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 11919189] [evidence TAS]; The process whereby a precursor cell type acquires the specialized features of a B cell [goid 30183] [pmid 1715889] [evidence IC ]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]; Progression from G1 phase to S phase of the mitotic cell cycle [goid 82] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [evidence IEA]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [evidence IEA]; The process whereby a relatively unspecialized mesodermal cell acquires the specialized structural and/or functional features of a cardioblast [goid 10002] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into a cardioblast cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42685] [evidence IEA]; The myofibril assembly process by which the muscle actomyosin is organized into sarcomeres. The sarcomere is the repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs [goid 45214] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell differentiation [goid 45596] [evidence IEA]; Any process that modulates the rate or extent of progression through the cell cycle [goid 51726] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 14681217] [evidence IPI]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 9552005] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with an integrin [goid 5178] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	GPIIA; VLAB; MDF2; FNRB; CD29; MSK12	GPIIA; VLAB; MDF2; FNRB; CD29; MSK12
Homo sapiens	RefSeq	NM_178125.2	ILMN_6662	TRIM50	NM_178125.2	NM_178125.2		135892	31342404	NM_178125.2	TRIM50	NP_835226.1	ILMN_1700408	0007200017	S	1821	CCCCAGTCCCTTTCCCCTCAGCCAAGGGTGTATTTGTAAACTTCGGCCCC	7	-	72726711-72726760	7q11.23a	Homo sapiens tripartite motif-containing 50 (TRIM50), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC138357; FLJ32804; TRIM50A; MGC138359	TRIM50A; MGC138359; MGC138357; FLJ32804
Homo sapiens	RefSeq	XM_942151.1	ILMN_6662	TRIM50	NM_178125.2	NM_178125.2		135892	31342404	NM_178125.2	TRIM50	NP_835226.1	ILMN_1719404	0000940358	A	454	GAGCCCAAGGTCTGCGTGCACCACCGGAACCCGCTCAGCCTTTTCTGCGA	7	-	72738483-72738532	7q11.23a	Homo sapiens tripartite motif-containing 50 (TRIM50), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC138357; FLJ32804; TRIM50A; MGC138359	
Homo sapiens	RefSeq	NM_001009610.1	ILMN_308668	FAM22D	NM_001009610.1	NM_001009610.1		728130	57528100	NM_001009610.1	FAM22D	NP_001009610.1	ILMN_3249487	0004760068	S	5259	TACCCACTAGCTGTGTGAGGGTCCCAGCGTCTCTCCATATTCGAGCCAAC	10	+	89120148-89120197	10q23.2b	Homo sapiens family with sequence similarity 22, member D (FAM22D), mRNA.				KIAA2020	KIAA2020
Homo sapiens	RefSeq	NM_006736.5	ILMN_34421	DNAJB2	NM_006736.5	NM_006736.5		3300	88501732	NM_006736.5	DNAJB2	NP_006727.2	ILMN_2390974	0003830653	A	3006	GGGAGTGGTGGAGCCAGTCGCTGTAACACTGAGCCTCAGAGACGAACCAA	2	+	219859747-219859796	2q35f	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 2 (DNAJB2), transcript variant 2, mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 1599432] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 1599432] [evidence TAS]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 1599432] [evidence TAS]	HSPF3; HSJ1	HSPF3; HSJ1
Homo sapiens	RefSeq	NM_006736.5	ILMN_34421	DNAJB2	NM_006736.5	NM_006736.5		3300	88501732	NM_006736.5	DNAJB2	NP_006727.2	ILMN_2285213	0002810746	I	2061	AGGAGGGGACTGCACCCATACTGCTTCCCTACCACAAATCAGGGCTCAGG	2	+	219858802-219858851	2q35f	Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 2 (DNAJB2), transcript variant 2, mRNA.		The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 1599432] [evidence TAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus [goid 6986] [pmid 1599432] [evidence TAS]	Interacting selectvely with a heat shock protein, any protein synthesized or activated in response to heat shock [goid 31072] [evidence IEA]; Interacting selectively with an unfolded protein [goid 51082] [pmid 1599432] [evidence TAS]	HSPF3; HSJ1	HSPF3; HSJ1
Homo sapiens	Unigene	Hs.402285	ILMN_89639	HS.402285	Hs.402285		Hs.402285		23299605	BU632350			ILMN_1908220	0006060273	S	400	TGAGAGAAAGAGCAGGTCTCCCAGGGCCAGGTCATCACCCCACTGACCTA	5	-	66599661-66599710		UI-H-FE1-beb-p-13-0-UI.s1 NCI_CGAP_FE1 Homo sapiens cDNA clone UI-H-FE1-beb-p-13-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	NM_001034914.1	ILMN_7437	KCNIP3	NM_001034914.1	NM_001034914.1		30818	78190494	NM_001034914.1	KCNIP3	NP_001030086.1	ILMN_2262644	0004640360	I	37	GTGGTGGTGCTGCTGTTCATCGCCGTCCTCAAGCAGTTCGGCATCCTGGA	2	+	95376531-95376580	2q11.1c	Homo sapiens Kv channel interacting protein 3, calsenilin (KCNIP3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10078534] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10900016] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10078534] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10078534] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10900016] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DREAM; CSEN; MGC18289; KCHIP3	DREAM; CSEN; MGC18289; KCHIP3
Homo sapiens	RefSeq	NM_001034914.1	ILMN_7437	KCNIP3	NM_001034914.1	NM_001034914.1		30818	78190494	NM_001034914.1	KCNIP3	NP_001030086.1	ILMN_2350823	0006940463	A	2308	TCGGCATTCACACACAGCCTGGCCTCCCCTGCGGAGCTGCATGGACGCCT	2	+	95415139-95415188	2q11.1c	Homo sapiens Kv channel interacting protein 3, calsenilin (KCNIP3), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 10078534] [evidence TAS]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 10900016] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10078534] [evidence TAS]; The function of a transcription cofactor that represses transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3714] [pmid 10078534] [evidence TAS]; Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 5267] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 10900016] [evidence TAS]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	DREAM; CSEN; MGC18289; KCHIP3	DREAM; CSEN; MGC18289; KCHIP3
Homo sapiens	Unigene	Hs.71657	ILMN_73488	HS.71657	Hs.71657		Hs.71657		27878165	BX110547			ILMN_1880064	0000380164	S	388	AGAGAAAAGGAGAGCCCCAGAGAGAGCACCCCTATGCTGCGGAAGAGGGA	1	-	27924409-27924458		BX110547 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998F172577, mRNA sequence					
Homo sapiens	RefSeq	XM_001725158.1	ILMN_348161	LOC100134455	XM_001725158.1	XM_001725158.1		100134455	169170730	XM_001725158.1	LOC100134455	XP_001725210.1	ILMN_3246135	0002490630	S	126	CGTTCTGGACTGCCTGGAGGTTTAACTGACGCTGCTGCACTGGATACCCC	7	+	101593942-101593960:101594185-101594194:101594195-101594215		PREDICTED: Homo sapiens hypothetical protein LOC100134455 (LOC100134455), mRNA.					
Homo sapiens	RefSeq	XM_001721064.1	ILMN_352448	LOC730107	XM_001721064.1	XM_001721064.1		730107	169213803	XM_001721064.1	LOC730107	XP_001721116.1	ILMN_3306482	0004900408	M	489	TGAAGATGGTTGGCTGATCAAGATGACACTGAGTAACCCTTCAGAACTAG				1q24.2a	PREDICTED: Homo sapiens similar to Glycine cleavage system H protein, mitochondrial (LOC730107), mRNA.					
Homo sapiens	RefSeq	XM_001720561.1	ILMN_350486	LOC100129913	XM_001720561.1	XM_001720561.1		100129913	169207659	XM_001720561.1	LOC100129913	XP_001720613.1	ILMN_3194432	0001440392	A	121	CCCAGATCAAAGGGTACCCTCCCACGGTTGGCAGGGCCTGGCTGAGTGCC				14q23.3a	PREDICTED: Homo sapiens hypothetical protein LOC100129913 (LOC100129913), mRNA.					
Homo sapiens	RefSeq	XM_001720561.1	ILMN_350486	LOC100129913	XM_001720561.1	XM_001720561.1		100129913	169207659	XM_001720561.1	LOC100129913	XP_001720613.1	ILMN_3270896	0005270026	M	181	TTTGTGCCACCACAGGCGGTCCCAGGAAGGGCAGCAAGGTCAGACCATTC				14q23.3a	PREDICTED: Homo sapiens hypothetical protein LOC100129913 (LOC100129913), mRNA.					
Homo sapiens	RefSeq	NM_001109977.1	ILMN_336703	FAM160A1	NM_001109977.1	NM_001109977.1		729830	158341645	NM_001109977.1	FAM160A1	NP_001103447.1	ILMN_3242248	0000780446	S	199	GAGGAGCCACGGCCGGGGACAGGTGATACACTTGGGTGTTGAAGGACATT	4	+	152330596-152330617:152375853-152375880	4q31.3b	Homo sapiens family with sequence similarity 160, member A1 (FAM160A1), mRNA.				FLJ43373	FLJ43373
Homo sapiens	RefSeq	NM_020786.1	ILMN_166501	PDP2	NM_020786.1	NM_020786.1		57546	41349496	NM_020786.1	PDP2	NP_065837.1	ILMN_2164978	0003390368	S	3524	TCTGAAACCATTAATATTCCTTCTTGGCTGGGTGCAGTGGTTTACGCCTG	16	+	65479050-65479099	16q22.1a	Homo sapiens pyruvate dehyrogenase phosphatase catalytic subunit 2 (PDP2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty-acid oxidation [goid 5759] [evidence IEA]; A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein [goid 8287] [evidence IEA]	The process of removing one or more phosphoric residues from a protein [goid 6470] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: protein serine/threonine phosphate + H2O = protein serine/threonine + phosphate [goid 4722] [evidence IEA]; Catalysis of the reaction: [pyruvate dehydrogenase (lipoamide)] phosphate + H2O = [pyruvate dehydrogenase (lipoamide)] + phosphate [goid 4741] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with manganese (Mn) ions [goid 30145] [evidence IEA]	KIAA1348	KIAA1348
Homo sapiens	RefSeq	NM_152609.1	ILMN_21085	C1ORF71	NM_152609.1	NM_152609.1		163882	22749246	NM_152609.1	C1orf71	NP_689822.1	ILMN_1670263	0006650121	S	3521	AAATCTGTCCGTTAGGTGGCCTTTCCTTATCTGAGGTGTAGTGGTCTAAC	1	+	244896962-244897011	1q44d	Homo sapiens chromosome 1 open reading frame 71 (C1orf71), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [pmid 11256614] [evidence IDA]			MGC18089; FLJ32001; RP11-452J6.1	MGC18089; FLJ32001; RP11-452J6.1
Homo sapiens	RefSeq	NM_001123366.1	ILMN_356760	HMSD	NM_001123366.1	NM_001123366.1		284293	183074520	NM_001123366.1	HMSD	NP_001116838.1	ILMN_3242763	0005080091	S	35	GCGGAGAACTGGGGCTCACCGTCATGGATGCTCTATCAGAAGCAAATGGC	18	+	61616622-61616634:61620588-61620624	18q21.33b	Homo sapiens histocompatibility (minor) serpin domain containing (HMSD), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]		
Homo sapiens	RefSeq	NM_030950.2	ILMN_4751	RFP	NM_030950.2	NM_030950.2		5987	18641280	NM_030950.2	RFP	NP_112212.1	ILMN_1730005	0002810491	A	2564	GAGACACTCGAAGTCAGAAGGCTGGGGCAGATCACTTCAAGCAAGCCCCC	6	-	28978832-28978881	6p22.1a	Homo sapiens ret finger protein (RFP), transcript variant beta, mRNA.				RNF76; TRIM27	RNF76; TRIM27
Homo sapiens	RefSeq	NM_001003828.1	ILMN_164891	PARVB	NM_001003828.1	NM_001003828.1		29780	51477695	NM_001003828.1	PARVB	NP_001003828.1	ILMN_1667592	0002140221	I	171	CCAGGCACTCATGGCTTCTCTGGCTGGTTCACTTCTCCCTGGCTCAGACA	22	+	42726798-42726847	22q13.31a	Homo sapiens parvin, beta (PARVB), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; A specialized region of connection between two cells or between a cell and the extracellular matrix [goid 30054] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	CGI-56	CGI-56
Homo sapiens	RefSeq	NM_001004746.1	ILMN_7151	OR5T2	NM_001004746.1	NM_001004746.1		219464	52317141	NM_001004746.1	OR5T2	NP_001004746.1	ILMN_1723322	0005290202	S	304	CTGAGTATGTTGTCTTCTGTGGATGCCTGCTATTCCTCAGTTATTACCCC	11	-	56000308-56000357	11q11c	Homo sapiens olfactory receptor, family 5, subfamily T, member 2 (OR5T2), mRNA.				OR11-177	OR11-177
Homo sapiens	RefSeq	XM_929177.1	ILMN_35028	LOC646227	XM_929177.2	XM_929177.2		646227	113416909	XM_929177.2	LOC646227	XP_934270.2	ILMN_1688665	0007560403	S	127	GCTGAAGAAGCAAAATTAAAAGCAAGGTATCCTCATCTGGGACAAAAGCC	5	+	180341957-180342006	5q35.3g	PREDICTED: Homo sapiens similar to cAMP-regulated phosphoprotein 19 (ARPP-19) (LOC646227), mRNA.					
Homo sapiens	RefSeq	NM_001014342.1	ILMN_29803	FLG2	NM_001014342.1	NM_001014342.1		388698	62122916	NM_001014342.1	FLG2	NP_001014364.1	ILMN_2233229	0005420730	S	8871	GACAAATCTATCCAAGGAGCTAAATGACGTGGTTTAGGAGCCAAAACGTC	1	-	150588038-150588087	1q21.3b	Homo sapiens filaggrin 2 (FLG2), mRNA.		The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]		
Homo sapiens	RefSeq	XM_935818.1	ILMN_137080	FLJ20397	XM_935818.1	XM_935818.1		54919	89026614	XM_935818.1	FLJ20397	XP_940911.1	ILMN_1727226	0007100152	I	61	CTCCTGTTGGATGTGTGCACCAGGGTGGTCGTGCTCTGCATCTGAGGATG				7p22.3c	PREDICTED: Homo sapiens hypothetical protein FLJ20397, transcript variant 4 (FLJ20397), mRNA.					
Homo sapiens	RefSeq	NM_005780.1	ILMN_8393	LHFP	NM_005780.1	NM_005780.1		10186	5031864	NM_005780.1	LHFP	NP_005771.1	ILMN_1767448	0001010139	S	1464	TCCCCACACACGCCTATGCACAAACGTGGATTATCGCACAGACTGGGAGG	13	-	38815518-38815567	13q13.3e	Homo sapiens lipoma HMGIC fusion partner (LHFP), mRNA.					
Homo sapiens	RefSeq	NM_152834.2	ILMN_8053	TMEM18	NM_152834.2	NM_152834.2		129787	40548390	NM_152834.2	TMEM18	NP_690047.2	ILMN_1772700	0000160541	S	1631	AGCCAAGTTCATGCCCCTCTCGGGCCTTTGTGGCTGAGAAGTGGGACAGA	2	-	668416-668465	2p25.3f	Homo sapiens transmembrane protein 18 (TMEM18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp434C1714	DKFZp434C1714
Homo sapiens	RefSeq	NM_152834.2	ILMN_8053	TMEM18	NM_152834.2	NM_152834.2		129787	40548390	NM_152834.2	TMEM18	NP_690047.2	ILMN_2123871	0004610646	S	1702	CCTCCCTGTAGCATTGTCCAGGGCCGTTGTGTAGATATTTGACTTCACTG	2	-	668345-668394	2p25.3f	Homo sapiens transmembrane protein 18 (TMEM18), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			DKFZp434C1714	DKFZp434C1714
Homo sapiens	RefSeq	NM_001236.3	ILMN_8256	CBR3	NM_001236.3	NM_001236.3		874	62240998	NM_001236.3	CBR3	NP_001227.1	ILMN_1652237	0005560543	S	879	AGCTGACAGGATTCTGGTGAATGCGTGCTGCCCAGGACCAGTGAAGACAG	21	+	36440497-36440546	21q22.12b	Homo sapiens carbonyl reductase 3 (CBR3), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: R-CHOH-R' + NADP+ = R-CO-R' + NADPH + H+ [goid 4090] [pmid 9740676] [evidence TAS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	hCBR3	hCBR3
Homo sapiens	RefSeq	NM_003861.1	ILMN_22204	WDR22	NM_003861.1	NM_003861.1		8816	55741848	NM_003861.1	WDR22	NP_003852.1	ILMN_1735402	0001570020	S	5723	AGGTGCCTTCCTCTGCTGAAGCCTTACCTCCTTCTCACCCAGTAACGGTT	14	-	68587437-68587486	14q24.1d	Homo sapiens WD repeat domain 22 (WDR22), mRNA.				KIAA1824; D14S1461E; BCRG2; DKFZp434A035; BCRP2	KIAA1824; D14S1461E; BCRG2; DKFZp434A035; BCRP2
Homo sapiens	RefSeq	XM_934263.1	ILMN_44285	LOC388237	XM_934263.1	XM_934263.1		388237	89040081	XM_934263.1	LOC388237	XP_939356.1	ILMN_1702341	0006960221	I	711	CCCGCAGTTGCAGGATAGTTCAGTGCTGATGCAGATGATGCCACGGCTCT	16	-	28263449-28263481:28263482-28263498	16p11.2e	PREDICTED: Homo sapiens similar to kidney-specific protein (KS), transcript variant 3 (LOC388237), mRNA.					
Homo sapiens	RefSeq	NM_014959.1	ILMN_13144	CARD8	NM_014959.1	NM_014959.1		22900	7662403	NM_014959.1	CARD8	NP_055774.1	ILMN_2192281	0006180377	S	4915	CTATCCTGTGTGTGCCTATGAGATTGGGTGCAGTGTATCCTGTTAGCTCC	19	-	53403423-53403472	19q13.32c	Homo sapiens caspase recruitment domain family, member 8 (CARD8), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11551959] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15030775] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43124] [pmid 11551959] [evidence IDA]; Any process that activates or increases the activity of a caspase, any of a group of cysteine proteases involved in apoptosis [goid 43280] [pmid 15030775] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of the regulated release of interleukin-1 beta from a cell or group of cells [goid 50718] [pmid 15030775] [evidence IDA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11551959] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15030775] [evidence IPI]; Increases the rate of proteolysis catalyzed by a caspase [goid 8656] [pmid 15030775] [evidence IDA]; Interacting selectively with a NACHT (NAIP, CIITA, HET-E and TP1) domain. The NACHT domain consists of seven distinct conserved motifs, including an ATP/GTPase specific P-loop, a Mg(2+)-binding site and five more specific motifs [goid 32089] [pmid 15030775] [evidence IPI]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 15030775] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	NDPP1; CARDINAL; TUCAN; KIAA0955; MGC57162; DKFZp779L0366; DACAR	NDPP1; CARDINAL; TUCAN; KIAA0955; MGC57162; DKFZp779L0366; DACAR
Homo sapiens	RefSeq	XM_932892.1	ILMN_42172	LOC643623	XM_932892.2	XM_932892.2		643623	113417670	XM_932892.2	LOC643623	XP_937985.1	ILMN_1774673	0006860433	I	1989	CCAATGGTAGCAGTCAGTGAGGATGAGTAGGGTAGTAATAATATATTATA	6	+	126082081-126082130	6q22.31e	PREDICTED: Homo sapiens hypothetical LOC643623, transcript variant 2 (LOC643623), mRNA.					
Homo sapiens	RefSeq	NM_007195.1	ILMN_17089	POLI	NM_007195.2	NM_007195.2		11201	154350219	NM_007195.2	POLI	NP_009126.2	ILMN_1702218	0001500110	S	2207	CTATGAACTACCAGAAGCAGTACAAAAGGAACTGCTGGCAGAGTGGAAGA	18	+	50074751-50074800	18q21.2c	Homo sapiens polymerase (DNA directed) iota (POLI), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10458907] [evidence TAS]	The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [pmid 10458907] [evidence TAS]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and primer [goid 3887] [pmid 10458907] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Catalysis of the transfer of a nucleotidyl group to a reactant [goid 16779] [evidence IEA]	RAD3OB; RAD30B	RAD3OB; RAD30B
Homo sapiens	RefSeq	NM_182913.1	ILMN_26837	SYNE2	NM_182913.2	NM_182913.2		23224	118918401	NM_182913.2	SYNE2	NP_878917.1	ILMN_1677009	0006020026	I	341	CCCTGAAAATCCTGAGGCATATCTTAAAATGACCACAAAAACTTTGAAAG	14	+	63751767-63751816	14q23.2b	Homo sapiens spectrin repeat containing, nuclear envelope 2 (SYNE2), transcript variant 4, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [evidence IEA]	FLJ11014; DKFZp686H1931; NUANCE; SYNE-2; FLJ45710; DKFZP434H2235; Nesprin-2; KIAA1011; FLJ46790; FLJ43727; NUA; DKFZp686E01115	NUANCE; DKFZP434H2235; KIAA1011; FLJ46790; NUA; DKFZp686H1931; SYNE-2; Nesprin-2
Homo sapiens	RefSeq	NR_030580.1	ILMN_388049	MIR298	NR_030580.1	NR_030580.1		100126296	262205967	NR_030580.1	MIR298		ILMN_3310426	0001690113	S	38	TTTTCCTTGACTGTGAGGAACTAGCCTGCTGCTTTGCTCAGGAGTGAGCT				20q13.32a	Homo sapiens microRNA 298 (MIR298), microRNA.					
Homo sapiens	RefSeq	XM_925827.1	ILMN_137348	LOC642280	XM_925827.1	XM_925827.1		642280	88972057	XM_925827.1	LOC642280	XP_930920.1	ILMN_1689604	0003710593	A	250	AATGCAGCAAAGCCTTTACTCAATCCTCATCCCTTAATAAACAAGAGAAT	4	+	238149-238198	4p16.3d	PREDICTED: Homo sapiens similar to zinc finger protein 595, transcript variant 1 (LOC642280), mRNA.					
Homo sapiens	RefSeq	XM_936789.1	ILMN_36140	LRRC4B	XM_936789.1	XM_936789.1		94030	89057587	XM_936789.1	LRRC4B	XP_941882.1	ILMN_1652574	0002340368	A	3269	TCGCCAGCTTCTGGTGTCCCCAGGCTGTCCTGGCTGGTGGCTGTATCACA				19q13.33c	PREDICTED: Homo sapiens leucine rich repeat containing 4B (LRRC4B), mRNA.	Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins [goid 7017] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with GTP, guanosine triphosphate [goid 5525] [evidence IEA]		
Homo sapiens	RefSeq	NM_152363.2	ILMN_4273	ANKRD41	NM_152363.2	NM_152363.2		126549	40255103	NM_152363.2	ANKRD41	NP_689576.2	ILMN_2091590	0004670554	S	2697	ACAAATGCCACGTCAACATCAGGACGTTAACCTTTAGACCCTATATGGTC	19	+	17259244-17259293	19p13.11e	Homo sapiens ankyrin repeat domain 41 (ANKRD41), mRNA.				FLJ39369	FLJ39369
Homo sapiens	RefSeq	NM_152363.2	ILMN_4273	ANKRD41	NM_152363.2	NM_152363.2		126549	40255103	NM_152363.2	ANKRD41	NP_689576.2	ILMN_1751744	0001050440	S	2057	GGAGGAGGACAAGAAGGGAAGCAGAAGGTGCTTTGGAACAGTCCGGTGCT	19	+	17258604-17258653	19p13.11e	Homo sapiens ankyrin repeat domain 41 (ANKRD41), mRNA.				FLJ39369	FLJ39369
Homo sapiens	RefSeq	NM_005387.4	ILMN_24361	NUP98	NM_005387.4	NM_005387.4		4928	56549642	NM_005387.4	NUP98	NP_005378.4	ILMN_2326793	0000630162	A	1928	CACCTACTCATTATAAACTGACACCCCGCCCTGCCACTAGAGTCCGGCCA	11	-	3765774-3765823	11p15.4d	Homo sapiens nucleoporin 98kDa (NUP98), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 9348540] [evidence IDA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [pmid 10087256] [evidence NAS]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 7736573] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]	The aggregation, arrangement and bonding together of the nuclear localization signal of a protein with nuclear envelope proteins such as importins [goid 59] [pmid 15229283] [evidence NAS]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 9348540] [evidence IMP]; The directed movement of molecules between the nucleus and the cytoplasm [goid 6913] [pmid 9348540] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of the nuclear pore [goid 6999] [pmid 9348540] [evidence NAS]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 7736573] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9348540] [evidence IPI]; The action of a molecule that contributes to the structural integrity of the nuclear pore complex [goid 17056] [pmid 9348540] [evidence NAS]	NUP196; NUP96; ADIR2	NUP196; NUP96; ADIR2
Homo sapiens	RefSeq	NM_000053.2	ILMN_21935	ATP7B	NM_000053.2	NM_000053.2		540	55743070	NM_000053.2	ATP7B	NP_000044.2	ILMN_1722056	0007510259	A	6338	ACTCCAGCCCGCAGCACATTTCCGCTGTCCGTCAGTAATTGTGTCCTCTC	13	-	52507059-52507108	13q14.3d	Homo sapiens ATPase, Cu++ transporting, beta polypeptide (ATP7B), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [pmid 15681833] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 16472602] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 15269005] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8298641] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 16472602] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 15269005] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 16939419] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IEA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [pmid 16554302] [evidence TAS]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IEA]; The secretion of milk by the mammary gland [goid 7595] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of copper ions into a cell or organelle [goid 15677] [pmid 16472602] [evidence IDA]; The directed movement of copper (Cu) ions within a cell [goid 15680] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus [goid 46688] [pmid 16472602] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus [goid 46688] [pmid 15269005] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus [goid 46688] [pmid 16939419] [evidence IDA]; The process of binding or confining calcium ions such that they are separated from other components of a biological system [goid 51208] [pmid 16472602] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [pmid 16472602] [evidence TAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [pmid 12763797] [evidence NAS]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 12029094] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16554302] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16884690] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16567646] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	WC1; PWD; WND; WD	WC1; PWD; WND; WD
Homo sapiens	RefSeq	NM_000053.2	ILMN_21935	ATP7B	NM_000053.2	NM_000053.2		540	55743070	NM_000053.2	ATP7B	NP_000044.2	ILMN_1696223	0001230601	I	2384	TATTCTCTGGTCATCCTGGTGGTTGCTGTGGCTGAGAAGGCGGAGAGGAG	13	-	52532525-52532574	13q14.3d	Homo sapiens ATPase, Cu++ transporting, beta polypeptide (ATP7B), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A prelysosomal endocytic organelle differentiated from early endosomes by lower lumenal pH and different protein composition. Late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center [goid 5770] [pmid 15681833] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [evidence IEA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 16472602] [evidence IDA]; The network of interconnected tubular and cisternal structures located at the side of the Golgi apparatus distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination [goid 5802] [pmid 15269005] [evidence IDA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8298641] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [pmid 16472602] [evidence IDA]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 15269005] [evidence IDA]; Cytoplasm situated near, or occurring around, the nucleus [goid 48471] [pmid 16939419] [evidence IDA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; The directed movement of copper (Cu) ions into, out of, within or between cells [goid 6825] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [evidence IEA]; The regulation of the levels, transport, and metabolism of copper ions within a cell or between a cell and its external environment [goid 6878] [pmid 16554302] [evidence TAS]; The regulation of the levels, transport, and metabolism of zinc ions within a cell or between a cell and its external environment [goid 6882] [evidence IEA]; The secretion of milk by the mammary gland [goid 7595] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The directed movement of copper ions into a cell or organelle [goid 15677] [pmid 16472602] [evidence IDA]; The directed movement of copper (Cu) ions within a cell [goid 15680] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus [goid 46688] [pmid 16472602] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus [goid 46688] [pmid 15269005] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus [goid 46688] [pmid 16939419] [evidence IDA]; The process of binding or confining calcium ions such that they are separated from other components of a biological system [goid 51208] [pmid 16472602] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [evidence IEA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [pmid 16472602] [evidence TAS]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu2+(in) = ADP + phosphate + Cu2+(out) [goid 4008] [pmid 12763797] [evidence NAS]; Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other [goid 5375] [evidence IEA]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 12029094] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16554302] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16884690] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 16567646] [evidence IDA]; Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate, to directly drive the transport of ions across a membrane. The reaction is characterized by the transient formation of a high-energy aspartyl-phosphoryl-enzyme intermediate [goid 15662] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane [goid 16820] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	WC1; PWD; WND; WD	WC1; PWD; WND; WD
Homo sapiens	RefSeq	NM_003810.2	ILMN_163298	TNFSF10	NM_003810.2	NM_003810.2		8743	23510439	NM_003810.2	TNFSF10	NP_003801.1	ILMN_1801307	0000870202	S	1317	GTAGTGTATCACAGTAGTAGCCTCCAGGTTTCCTTAAGGGACAACATCCT	3	-	173706550-173706599	3q26.31b	Homo sapiens tumor necrosis factor (ligand) superfamily, member 10 (TNFSF10), mRNA.	That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8777713] [evidence EXP]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 10894160] [evidence EXP]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 8663110] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8663110] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 8663110] [evidence TAS]; Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat [goid 6955] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8777713] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 8663110] [evidence TAS]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 8777713] [evidence TAS]; The conversion of proteins that induce or sustain apoptosis to an active form [goid 8633] [pmid 14644197] [evidence EXP]; Any process that activates or increases the frequency, rate or extent of an I-kappaB kinase/NF-kappaB induced cascade [goid 43123] [pmid 12761501] [evidence IEP]	Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Functions to control the survival, growth, differentiation and effector function of tissues and cells [goid 5125] [evidence IEA]; Interacting selectively with the tumor necrosis factor receptor [goid 5164] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	TL2; Apo-2L; CD253; APO2L; TRAIL	TL2; Apo-2L; CD253; APO2L; TRAIL
Homo sapiens	RefSeq	NM_015176.1	ILMN_22101	FBXO28	NM_015176.1	NM_015176.1		23219	7662157	NM_015176.1	FBXO28	NP_055991.1	ILMN_2045911	0006040292	S	2684	CCGTCCACCGTGACATGGTTATGCATCCTTTAGATTAACCTCACCAAATG	1	+	222413629-222413678	1q42.11a-q42.11b	Homo sapiens F-box protein 28 (FBXO28), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FLJ10766; KIAA0483; Fbx28	FLJ10766; KIAA0483; Fbx28
Homo sapiens	RefSeq	NM_015176.1	ILMN_22101	FBXO28	NM_015176.1	NM_015176.1		23219	7662157	NM_015176.1	FBXO28	NP_055991.1	ILMN_1812776	0003990767	S	2360	GCATGTCTTGCACTGTTCAACCTCCTGAGTGGTCGCTTTAACAACCTCCA	1	+	222413305-222413354	1q42.11a-q42.11b	Homo sapiens F-box protein 28 (FBXO28), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]		FLJ10766; KIAA0483; Fbx28	FLJ10766; KIAA0483; Fbx28
Homo sapiens	RefSeq	NM_001138.1	ILMN_11321	AGRP	NM_001138.1	NM_001138.1		181	4501994	NM_001138.1	AGRP	NP_001129.1	ILMN_1770336	0002690392	I	238	ATATAAGCCAAGGGCACGGGGTGGCCGGGAACTCTCTAGGCAAGAATCCC	16	-	67517429-67517478	16q22.1b	Homo sapiens agouti related protein homolog (mouse) (AGRP), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [pmid 9311920] [evidence TAS]; Behavior associated with the intake of food [goid 7631] [pmid 9751529] [evidence TAS]; A series of molecular signals mediated by the detection of a hormone [goid 9755] [evidence IEA]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 10318826] [evidence TAS]; The action characteristic of a neuropeptide hormone, any peptide hormone that acts in the central nervous system. A neuropeptide is any of several types of molecules found in brain tissue, composed of short chains of amino acids; they include endorphins, enkephalins, vasopressin, and others. They are often localized in axon terminals at synapses and are classified as putative neurotransmitters, although some are also hormones [goid 5184] [pmid 9311920] [evidence TAS]	ASIP2; MGC118963; AGRT; ART	ASIP2; MGC118963; AGRT; ART
Homo sapiens	RefSeq	NM_138368.2	ILMN_25736	DKFZP761E198	NM_138368.3	NM_138368.3		91056	149999370	NM_138368.3	DKFZp761E198	NP_612377.3	ILMN_1717594	0003780382	S	4107	TTACGCCTCCTGATCCTTCCGATTGGGGCAGACTAGGAGAGGAAAGACGG	11	-	65543666-65543715	11q13.1d	Homo sapiens DKFZp761E198 protein (DKFZp761E198), mRNA.				PP1030	PP1030
Homo sapiens	Unigene	Hs.551042	ILMN_110450	HS.551042	Hs.551042		Hs.551042		5339477	AI791835			ILMN_1863114	0006290154	S	373	AGGACACTACCATTGAGCTAGACCTCTGTTGGCAGCCATCTGGCTTCTCT	4	-	147233670-147233719		nc46d05.y5 NCI_CGAP_Pr3 Homo sapiens cDNA clone IMAGE:1011177, mRNA sequence					
Homo sapiens	RefSeq	NR_001562.1	ILMN_10494	ANXA2P1	NR_001562.1	NR_001562.1		303	34304006	NR_001562.1	ANXA2P1		ILMN_2041101	0003370202	S	1269	GAAGTCTATGATGTAAACACTTTGCCTCCTGTGTACTGTGTCATAAACGG	4	-	154448095-154448144	4q31.3d	Homo sapiens annexin A2 pseudogene 1 (ANXA2P1) on chromosome 4.				LPC2A; ANX2L1; ANX2P1	LPC2A; ANX2L1; ANX2P1
Homo sapiens	RefSeq	NR_001562.1	ILMN_10494	ANXA2P1	NR_001562.1	NR_001562.1		303	34304006	NR_001562.1	ANXA2P1		ILMN_1698100	0000270609	S	1004	CCAGCAAGACACTAAGGGTGCTGTACCTGTGTGGTGGAGATGGCTGAAGT	4	-	154448360-154448409	4q31.3d	Homo sapiens annexin A2 pseudogene 1 (ANXA2P1) on chromosome 4.				LPC2A; ANX2L1; ANX2P1	LPC2A; ANX2L1; ANX2P1
Homo sapiens	RefSeq	XM_001724272.1	ILMN_352403	LOC100131713	XM_001724272.1	XM_001724272.1		100131713	169165824	XM_001724272.1	LOC100131713	XP_001724324.1	ILMN_3219340	0007210026	A	505	CTGCCAACATGAGGACAGAAGGACTGGTGTGACCCCCTACCCCCGCCCCT				3p22.2b	PREDICTED: Homo sapiens similar to ribosomal protein L29, transcript variant 2 (LOC100131713), mRNA.					
Homo sapiens	Unigene	Hs.145049	ILMN_78147	HS.145049	Hs.145049		Hs.145049		50503246	CR622439			ILMN_1900661	0005870605	S	1020	CTTGCCAGTGGCCCTGTCACTCCCATGATGCTTTGGTTTTGAGAGTTGGG	1	+	15867806-15867855		full-length cDNA clone CS0DF005YI08 of Fetal brain of Homo sapiens (human)					
Homo sapiens	RefSeq	NM_020762.1	ILMN_7756	SRGAP1	NM_020762.1	NM_020762.1		57522	44917603	NM_020762.1	SRGAP1	NP_065813.1	ILMN_1677432	0002470220	S	4191	CCCTGTGTTCTCCTCTGTGGAAATGAAGGCAGCAAGAAGCACCTGAGGCC	12	+	62823596-62823645	12q14.2b	Homo sapiens SLIT-ROBO Rho GTPase activating protein 1 (SRGAP1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Rho family of proteins switching to a GTP-bound active state [goid 7266] [evidence IEA]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [evidence IEA]	Increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP [goid 5096] [evidence IEA]; Increases the rate of GTP hydrolysis by a GTPase of the Rho family [goid 5100] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with Rho protein, any member of the Rho subfamily of the Ras superfamily of monomeric GTPases. Proteins in the Rho subfamily are involved in relaying signals from cell-surface receptors to the actin cytoskeleton [goid 17048] [evidence IEA]	ARHGAP13; KIAA1304; FLJ22166	ARHGAP13; KIAA1304; FLJ22166
Homo sapiens	RefSeq	NM_004763.2	ILMN_17602	ITGB1BP1	NM_004763.3	NM_004763.3		9270	115527101	NM_004763.3	ITGB1BP1	NP_004754.1	ILMN_1690099	0006180019	I	640	CTGGCTCTGAAGACCACAGATGCAAGCAATGAGGAATACAGCCTGTGGGT	2	-	9547596-9547645	2p25.1e	Homo sapiens integrin beta 1 binding protein 1 (ITGB1BP1), transcript variant 1, mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 11919189] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 11919189] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [pmid 9281591] [evidence NAS]; A thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments [goid 30027] [pmid 11919189] [evidence IDA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9281591] [evidence TAS]; The binding of a cell to the extracellular matrix via adhesion molecules [goid 7160] [pmid 9281591] [evidence IDA]; A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound [goid 7243] [pmid 9813144] [evidence TAS]; The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 11919189] [evidence TAS]; Any series of molecular signals generated as a consequence of an integrin binding to one of its physiological ligands [goid 7229] [evidence IEA]	Interacting selectively with a protein C-terminus, the end of any peptide chain at which the 1-carboxy function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 8022] [pmid 9281591] [evidence TAS]	ICAP1B; ICAP-1alpha; ICAP1A; ICAP1; ICAP-1B; DKFZp686K08158; ICAP-1A	ICAP1B; ICAP1A; ICAP1; ICAP-1B; ICAP-1A
Homo sapiens	RefSeq	NM_080746.2	ILMN_15682	RPL10L	NM_080746.2	NM_080746.2		140801	18490985	NM_080746.2	RPL10L	NP_542784.1	ILMN_1737709	0005050072	S	735	AGGTTTTGGCAGTACTGTCTCCTTGGGCCATGCTGGTCTGACTTATGCTT	14	-	47120244-47120293	14q21.3c	Homo sapiens ribosomal protein L10-like (RPL10L), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11256614] [evidence IDA]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The large subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22625] [pmid 12490704] [evidence NAS]	The chemical reactions and pathways resulting in the formation of a protein. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein [goid 6412] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [pmid 12490704] [evidence IEP]	The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [evidence IEA]	FLJ27353	FLJ27353
Homo sapiens	RefSeq	NM_005582.1	ILMN_183043	CD180	NM_005582.1	NM_005582.1		4064	5031894	NM_005582.1	CD180	NP_005573.1	ILMN_1665647	0004120068	S	2483	CAGCACCACACACCCCGCCCCTGAAAGGAGATCATCAGCCCCCACAATTT	5	-	66514037-66514086	5q13.1a	Homo sapiens CD180 molecule (CD180), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages [goid 6954] [evidence IEA]; Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens [goid 45087] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8975706] [evidence TAS]	MGC126234; MGC126233; LY64; RP105; Ly78	LY64; Ly78; MGC126234; MGC126233; RP105
Homo sapiens	RefSeq	NM_005733.1	ILMN_14100	KIF20A	NM_005733.1	NM_005733.1		10112	5032012	NM_005733.1	KIF20A	NP_005724.1	ILMN_1695658	0001050195	S	2640	GATCCTACGCTCACGGCGTTCCCCTTTACTCAAATCTGGGCCTTTTGGCA	5	+	137550940-137550989	5q31.2c	Homo sapiens kinesin family member 20A (KIF20A), mRNA.	That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12939256] [evidence EXP]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 9438855] [evidence TAS]; Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle [goid 5874] [evidence IEA]; Any multimeric complex connected to a microtubule [goid 5875] [evidence IEA]	Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins [goid 7018] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [pmid 9438855] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP) [goid 3777] [evidence IEA]; Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [pmid 9438855] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	RAB6KIFL; MKLP2; FLJ21151	RAB6KIFL; MKLP2; FLJ21151
Homo sapiens	RefSeq	NM_002020.1	ILMN_28031	FLT4	NM_002020.1	NM_002020.1		2324	4503752	NM_002020.1	FLT4	NP_002011.1	ILMN_1794741	0000940056	A	3616	TTCTCGCAGGTGTCCACCATGGCCCTACACATCGCCCAGGCTGACGCTGA	5	-	179970978-179971027	5q35.3f	Homo sapiens fms-related tyrosine kinase 4 (FLT4), transcript variant 2, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8386825] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 11574540] [evidence IGI]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [pmid 11574540] [evidence IGI]; The series of molecular signals generated as a consequence of vascular endothelial growth factor receptor binding to one of its physiological ligands [goid 48010] [pmid 9012504] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with vascular endothelial growth factor to initiate a change in cell activity [goid 5021] [pmid 9012504] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16530705] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PCL; FLT41; VEGFR3	PCL; FLT41; VEGFR3
Homo sapiens	RefSeq	NM_001019.4	ILMN_27642	RPS15A	NM_001019.4	NM_001019.4		6210	71772358	NM_001019.4	RPS15A	NP_001010.2	ILMN_2255310	0007100717	I	40	CTGAGAGCTCCAATTTCATCCGTCTGCCATCGGCGCCATCCTGCAATCTA	16	-	18801567-18801616	16p12.3b	Homo sapiens ribosomal protein S15a (RPS15A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15108328] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 15108328] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 15108328] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [pmid 15108328] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9582194] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 9582194] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	S15a; FLJ27457; MGC111208	S15a; FLJ27457; MGC111208
Homo sapiens	RefSeq	NM_001019.4	ILMN_27642	RPS15A	NM_001019.4	NM_001019.4		6210	71772358	NM_001019.4	RPS15A	NP_001010.2	ILMN_2337241	0002370193	A	315	GGTGATCAGCCCCAGATTTGACGTGCAACTCAAAGACCTGGAAAAATGGC	16	-	18796090-18796139	16p12.3b	Homo sapiens ribosomal protein S15a (RPS15A), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15108328] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 12588972] [evidence EXP]; An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins [goid 5840] [evidence IEA]; The small subunit of the ribosome that is found in the cytosol of the cell. The cytosol is that part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 22627] [pmid 15883184] [evidence IDA]	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis [goid 6414] [pmid 15189156] [evidence EXP]; Any process that activates or increases the rate or extent of cell proliferation [goid 8284] [pmid 15108328] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [pmid 15108328] [evidence IDA]; Any process that activates or increases the rate or extent of progression through the cell cycle [goid 45787] [pmid 15108328] [evidence IDA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [pmid 9582194] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 9582194] [evidence NAS]; The action of a molecule that contributes to the structural integrity of the ribosome [goid 3735] [pmid 15883184] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14667819] [evidence IPI]	S15a; FLJ27457; MGC111208	S15a; FLJ27457; MGC111208
Homo sapiens	RefSeq	XR_017508.2	ILMN_174469	LOC440031	XR_017508.2	XR_017508.2		440031	169202509	XR_017508.2	LOC440031		ILMN_3200739	0004780598	A	777	CTCGCACTGGTAGGAGAAACTGCCAGGACAACCCTAACCGCTCGCCTTCT	11	-	15051934-15051983	11p15.2a	PREDICTED: Homo sapiens misc_RNA (LOC440031), miscRNA.					
Homo sapiens	RefSeq	NM_032578.1	ILMN_27889	MYPN	NM_032578.1	NM_032578.1		84665	14211894	NM_032578.1	MYPN	NP_115967.1	ILMN_2191803	0002640343	S	5321	CACCTCATGGGCTCCTACCCCTTTCCCCAAAAGTCTGAAAGTGTAGGAGG	10	+	69641088-69641137	10q21.3d	Homo sapiens myopalladin (MYPN), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]	MYOP	MYOP
Homo sapiens	RefSeq	NM_152384.2	ILMN_175768	BBS5	XM_001131846.1	XM_001131846.1		129880	113414080	XM_001131846.1	BBS5	XP_001131846.1	ILMN_1711053	0007610161	I	3226	ACCTGTAAAGTCTTAGTTTTCAGACATTAAGTGACTGTATCATGTTCGGT				2q31.1a	PREDICTED: Homo sapiens Bardet-Biedl syndrome 5, transcript variant 2 (BBS5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence ISS]; A protein complex that associates with the primary cilium and is involved in cilium biogenesis; consists of seven conserved proteins: BBS1, BBS2, BBS4, BBS5, BBS7, BBS8 and BBS9 [goid 34464] [pmid 17574030] [evidence IDA]	The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence ISS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers [goid 9296] [evidence ISS]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence ISS]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [pmid 17574030] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with phosphatidylinositol 3-phosphate, a phosphorylated derivative of phosphatidylinositol [goid 32266] [pmid 17574030] [evidence IDA]		
Homo sapiens	RefSeq	XM_939889.1	ILMN_175768	BBS5	XM_001131846.1	XM_001131846.1		129880	113414080	XM_001131846.1	BBS5	XP_001131846.1	ILMN_1663592	0003170326	A	1183	GGAAGAAAAGCCCCAGCCGCTCGAAGCTCTGACAGTCGAACAAATTCAAG				2q31.1a	PREDICTED: Homo sapiens Bardet-Biedl syndrome 5, transcript variant 2 (BBS5), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [pmid 11256614] [evidence IDA]; A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 5929] [evidence IEA]; A short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium or flagellum that is similar in structure to a centriole. The basal body serves as a nucleation site for axoneme growth [goid 5932] [evidence ISS]; A protein complex that associates with the primary cilium and is involved in cilium biogenesis; consists of seven conserved proteins: BBS1, BBS2, BBS4, BBS5, BBS7, BBS8 and BBS9 [goid 34464] [pmid 17574030] [evidence IDA]	The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence ISS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The assembly of a flagellum. In bacteria, this is a whiplike motility appendage present on the surface of some species; in eukaryotes, flagella are threadlike protoplasmic extensions used to propel flagellates and sperm. Flagella are composed of flagellin and have the same basic structure as cilia but are longer in proportion to the cell and present in much smaller numbers [goid 9296] [evidence ISS]; The directed movement of melanosomes into, out of, within or between cells [goid 32402] [evidence ISS]; The assembly of a cilium, a specialized eukaryotic locomotor organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole [goid 42384] [pmid 17574030] [evidence IMP]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Interacting selectively with phosphatidylinositol 3-phosphate, a phosphorylated derivative of phosphatidylinositol [goid 32266] [pmid 17574030] [evidence IDA]		
Homo sapiens	RefSeq	XM_001723005.1	ILMN_348619	LOC100133013	XM_001723005.1	XM_001723005.1		100133013	169204444	XM_001723005.1	LOC100133013	XP_001723057.1	ILMN_3291492	0006650468	M	329	ACTCCCATTTTACAACACAGGGCAGGCAAGAAGACAACCAGCTCGATGGA	12	+	111224322-111224371	12q24.13a	PREDICTED: Homo sapiens similar to PRO1477 (LOC100133013), mRNA.					
Homo sapiens	RefSeq	NM_174920.2	ILMN_6753	SAMD14	NM_174920.2	NM_174920.2		201191	31341380	NM_174920.2	SAMD14	NP_777580.1	ILMN_1760688	0005560280	S	1744	TCCCACGCTCTCAGGGGGGACATGCTCTCTCTTACCCTGTCACTTGGTCT	17	-	48190100-48190149	17q21.33a	Homo sapiens sterile alpha motif domain containing 14 (SAMD14), mRNA.				FLJ36890	FLJ36890
Homo sapiens	RefSeq	NM_000226.2	ILMN_15527	KRT9	NM_000226.2	NM_000226.2		3857	55956898	NM_000226.2	KRT9	NP_000217.2	ILMN_1792568	0005820291	S	2213	ACCTCTTTCCTCTCTCTGGCCTGGGGTGCTCTCACACCCTGCACGATCTT	17	-	36975646-36975695	17q21.2b	Homo sapiens keratin 9 (epidermolytic palmoplantar keratoderma) (KRT9), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 18029348] [evidence IDA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [evidence IEA]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whose specific outcome is the progression of the skin over time, from its formation to the mature structure. The skin is the external membranous integument of an animal. In vertebrates the skin generally consists of two layers, an outer nonsensitive and nonvascular epidermis (cuticle or skarfskin) composed of cells which are constantly growing and multiplying in the deeper, and being thrown off in the superficial layers, as well as an inner vascular dermis (cutis, corium or true skin) composed mostly of connective tissue [goid 43588] [pmid 7507869] [evidence IDA]; Control of the spatial distribution of intermediate filaments; includes organizing filaments into meshworks, bundles, or other structures, as by cross-linking [goid 45109] [pmid 10218578] [evidence IMP]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 8647270] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17373842] [evidence IPI]	EPPK; K9	EPPK; K9
Homo sapiens	RefSeq	XR_015253.2	ILMN_162189	FLJ43859	XR_015253.2	XR_015253.2		389761	169176352	XR_015253.2	FLJ43859		ILMN_3186578	0001260594	A	439	GTCGACTGTTATGCCCAGACCCTGTCTGTCGGGTGTGTAACAGAGCAACT	9	+	83735249-83735298	9q21.32a	PREDICTED: Homo sapiens misc_RNA (FLJ43859), miscRNA.					
Homo sapiens	Unigene	Hs.201996	ILMN_81737	HS.201996	Hs.201996		Hs.201996		4970868	AI693528			ILMN_1822439	0000380053	S	139	AGAGTGACCACCATTCAGGTGCCGAGAAGGTATCTGAAGCTCCCACAGGC	15	-	99610814-99610863		wd43f04.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2330911 3, mRNA sequence					
Homo sapiens	RefSeq	XM_942585.1	ILMN_39448	LOC652871	XM_942585.1	XM_942585.1		652871	89065120	XM_942585.1	LOC652871	XP_947678.1	ILMN_1802573	0002060653	S	272	CTACTAATGGCCGCTCAAAAATGGCCATAGTGCGTGGCTTCTGGGACCCC					PREDICTED: Homo sapiens similar to nodal modulator 1 (LOC652871), mRNA.					
Homo sapiens	RefSeq	NM_203306.1	ILMN_170343	MGC39606	XM_001127817.1	XM_001127817.1		399668	113430102	XM_001127817.1	MGC39606	XP_001127817.1	ILMN_1789995	0006250424	S	2413	CCTACTGGGATAAAGTTGCGTCAGCCGCAGGGGTCTCTGCCCTCAAAGAC	X	+	134386840-134386889	Xq26.3a	PREDICTED: Homo sapiens hypothetical protein MGC39606 (MGC39606), mRNA.					
Homo sapiens	Unigene	Hs.569953	ILMN_122134	HS.569953	Hs.569953		Hs.569953		14453678	BI047056			ILMN_1889144	0002000612	S	359	GAGGGTGGTATGGGAAGTCTGAGGTGGCTGGGAGAGGAACTGGCGAAGTA	19	+	40616815-40616864		MR3-FN0206-070201-014-b05 FN0206 Homo sapiens cDNA, mRNA sequence					
Homo sapiens	RefSeq	NM_199426.1	ILMN_488	ZFP64	NM_199426.1	NM_199426.1		55734	40806226	NM_199426.1	ZFP64	NP_955458.1	ILMN_2340439	0004670328	A	1033	CTTCAAATGCCAGATCTGCCCCTACGCCAGCCGCAACTCCAGCCAGCTCA	20	-	50776685-50776734	20q13.2a	Homo sapiens zinc finger protein 64 homolog (mouse) (ZFP64), transcript variant 3, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	ZNF338; MGC940	MGC940; ZNF338
Homo sapiens	RefSeq	NM_176894.1	ILMN_9350	P2RY13	NM_176894.1	NM_176894.1		53829	29171722	NM_176894.1	P2RY13	NP_795713.1	ILMN_1664525	0002650300	I	14	GAACTAATGACTGCCGCCATAAGAAGACAGAGAGAACTGAGTATCCTCCC	3	-	152529962-152530011	3q25.1c	Homo sapiens purinergic receptor P2Y, G-protein coupled, 13 (P2RY13), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence NAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]; Combining with a purine nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity [goid 45028] [evidence IEA]	P2Y13; FKSG77; SP174; GPR86; GPR94; GPCR1	P2Y13; FKSG77; SP174; GPR86; GPR94; GPCR1
Homo sapiens	RefSeq	NM_173525.1	ILMN_169399	C11ORF42	NM_173525.1	NM_173525.1		160298	27734960	NM_173525.1	C11orf42	NP_775796.1	ILMN_1729842	0006580167	S	908	AGATACTGTCAGAGAACTGGCTCTTCAGCCCCCGCAGCCCTCCACCAGGA	11	+	6188443-6188454:6188718-6188755	11p15.4c	Homo sapiens chromosome 11 open reading frame 42 (C11orf42), mRNA.				MGC34805	MGC34805
Homo sapiens	Unigene	Hs.381884	ILMN_88881	HS.381884	Hs.381884		Hs.381884		46250030	BC068582			ILMN_1894367	0005670519	S	1757	ACCCACAGCGCCATCTCCTGGTAATGAGGAGAATATAGCGATGGATGACA	8	-	65650296-65650345		Homo sapiens hypothetical gene supported by BC022555; BC050012, mRNA (cDNA clone IMAGE:5303997)					
Homo sapiens	RefSeq	NM_004281.3	ILMN_177775	BAG3	NM_004281.3	NM_004281.3		9531	62530382	NM_004281.3	BAG3	NP_004272.2	ILMN_1659766	0001340075	S	2278	TTCTGCAGCCCTGTCTACTTGGGCACCCCCACCACCTGTTAGCTGTGGTT	10	+	121426542-121426591	10q26.11d	Homo sapiens BCL2-associated athanogene 3 (BAG3), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 10597216] [evidence IDA]	The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure [goid 6457] [pmid 9873016] [evidence NAS]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10597216] [evidence NAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Modulates the activity of chaperones of the Hsp70/Hsc70 class [goid 30192] [pmid 9873016] [evidence NAS]	BAG-3; MGC104307; CAIR-1; BIS	CAIR-1; BIS; BAG-3; MGC104307
Homo sapiens	RefSeq	NM_021728.2	ILMN_18837	OTX2	NM_021728.2	NM_021728.2		5015	27436931	NM_021728.2	OTX2	NP_068374.1	ILMN_1722959	0001710088	I	5	GCGGGACCGGCCTCAGCTCCAACACAGCCTCCACTGTGATTAAAAATAAA	14	-	57277130-57277179	14q23.1a	Homo sapiens orthodenticle homeobox 2 (OTX2), transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The migrating motile tip of a growing nerve cell axon or dendrite [goid 30426] [pmid 16267555] [evidence IDA]	The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [pmid 16267555] [evidence IDA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; Any process that modulates the frequency, rate or extent of smoothened signaling [goid 8589] [pmid 15705863] [evidence TAS]; Morphogenesis of an organ. An organ is defined as a tissue or set of tissues that work together to perform a specific function or functions. Morphogenesis is the process by which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions [goid 9887] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; The regionalization process by which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation [goid 9953] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [pmid 15705863] [evidence TAS]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [evidence IEA]; The process whose specific outcome is the progression of the midbrain over time, from its formation to the mature structure. The midbrain is the middle division of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes a ventral part containing the cerebral peduncles and a dorsal tectum containing the corpora quadrigemina and that surrounds the aqueduct of Sylvius connecting the third and fourth ventricles) [goid 30901] [pmid 15705863] [evidence TAS]; Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity [goid 40036] [pmid 15705863] [evidence TAS]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into an eye photoreceptor cell. A photoreceptor cell is a cell that responds to incident electromagnetic radiation. Different classes of photoreceptor have different spectral sensitivities and express different photosensitive pigments [goid 42706] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; The process whereby the developmental fate of a cell becomes restricted such that it will develop into a neuron [goid 48663] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with eukaryotic initiation factor 4E, a polypeptide factor involved in the initiation of ribosome-mediated translation [goid 8190] [pmid 15705863] [evidence TAS]; Plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor [goid 30528] [evidence IEA]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]	MCOPS5; MGC45000	MCOPS5; MGC45000
Homo sapiens	RefSeq	NM_206832.1	ILMN_16841	TMIGD1	NM_206832.1	NM_206832.1		388364	45592948	NM_206832.1	TMIGD1	NP_996663.1	ILMN_1771467	0002680672	S	863	GAAAGCTGAGATGCCATCGAATACAGAGAGAGTTTTGCATCAGGACCTCC	17	-	28643654-28643703	17q11.2c	Homo sapiens transmembrane and immunoglobulin domain containing 1 (TMIGD1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			TMIGD; UNQ9372	TMIGD; UNQ9372
Homo sapiens	RefSeq	NR_023387.1	ILMN_365568	ABCC6P2	NR_023387.1	NR_023387.1		730013	190341053	NR_023387.1	ABCC6P2		ILMN_3244070	0001340162	S	207	TGGCCGGGGCTACCTCCAGATGTCCCCACTCTTCAAAGCCAAGATGGTAG	16	-	14916738-14916787	16p13.11b	Homo sapiens ATP-binding cassette, sub-family C, member 6 pseudogene 2 (ABCC6P2), non-coding RNA.					
Homo sapiens	RefSeq	NM_152444.1	ILMN_8474	PTGR2	NM_152444.1	NM_152444.1		145482	22748928	NM_152444.1	PTGR2	NP_689657.1	ILMN_2105253	0006220202	S	2085	ACAGCCGGGCCTGATGTCTCAAGCCTGTAATCCTAGCACTTTGGGAGGCA	14	+	73421462-73421511	14q24.3a	Homo sapiens prostaglandin reductase 2 (PTGR2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence NAS]; Catalysis of the reaction: (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprostanoate + NAD(P)+ = (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprosta-13-enoate + NAD(P)H + H+ [goid 47522] [evidence IEA]	FLJ39091; PGR-2; PGR2; DKFZp686P10120	FLJ39091; PGR-2; PGR2; DKFZp686P10120
Homo sapiens	RefSeq	NM_152444.1	ILMN_8474	PTGR2	NM_152444.1	NM_152444.1		145482	22748928	NM_152444.1	PTGR2	NP_689657.1	ILMN_2105254	0002650465	S	2267	CTGAGGCTGGAGAATCATTTGAACCTGGGAGGGGGAGGTTGCCGTGAGCT	14	+	73421644-73421693	14q24.3a	Homo sapiens prostaglandin reductase 2 (PTGR2), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence NAS]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence NAS]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence NAS]; Catalysis of the reaction: (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprostanoate + NAD(P)+ = (5Z)-(15S)-11-alpha-hydroxy-9,15-dioxoprosta-13-enoate + NAD(P)H + H+ [goid 47522] [evidence IEA]	FLJ39091; PGR-2; PGR2; DKFZp686P10120	FLJ39091; PGR-2; PGR2; DKFZp686P10120
Homo sapiens	RefSeq	NM_001135580.1	ILMN_370992	C19ORF71	NM_001135580.1	NM_001135580.1		100128569	207442676	NM_001135580.1	C19orf71	NP_001129052.1	ILMN_3242508	0004120382	S	437	GGAAAGACAGGCCAATCCGGGGCAAGGAATACGTGCTCAACAGGAACCGG	19	+	3543646-3543678:3543827-3543843	19p13.3e	Homo sapiens chromosome 19 open reading frame 71 (C19orf71), mRNA.					
Homo sapiens	RefSeq	NM_144725.3	ILMN_29633	TTC23L	NM_144725.3	NM_144725.3		153657	116089275	NM_144725.3	TTC23L	NP_653326.3	ILMN_2190126	0000050709	S	906	GGAGGAACCACAACCAGGCCATCCAGTACTTGCAGCAGGCTCATTCTGTC	5	+	34867137-34867174:34869010-34869021	5p13.2d	Homo sapiens tetratricopeptide repeat domain 23-like (TTC23L), mRNA.					
Homo sapiens	RefSeq	NM_199336.1	ILMN_4943	FAHD2B	NM_199336.1	NM_199336.1		151313	40786393	NM_199336.1	FAHD2B	NP_955368.1	ILMN_2146657	0005700309	S	1079	ATCAACAAGGTGGTGTGATGGCTCCTGCACAGGCCCGACATAGGATGAGG	2	-	97749459-97749491:97749492-97749508	2q11.2b	Homo sapiens fumarylacetoacetate hydrolase domain containing 2B (FAHD2B), mRNA.		The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	DKFZp434N062	DKFZp434N062
Homo sapiens	RefSeq	NM_021632.3	ILMN_20125	ZNF350	NM_021632.3	NM_021632.3		59348	59710106	NM_021632.3	ZNF350	NP_067645.3	ILMN_1755850	0001240286	S	1677	CGTAGTCCTTGTGGGACAGCCAGTGGTCAGATGTGCAGCCTCAGGAGATA	19	-	57160019-57160068	19q13.33e	Homo sapiens zinc finger protein 350 (ZNF350), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [evidence IEA]; A protein complex that possesses activity that prevents or downregulates transcription [goid 17053] [pmid 11090615] [evidence IDA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 11090615] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [pmid 11090615] [evidence IDA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 11090615] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11090615] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Any transcription regulator activity that prevents or downregulates transcription [goid 16564] [pmid 11090615] [evidence IDA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	ZBRK1; ZFQR	ZBRK1; ZFQR
Homo sapiens	RefSeq	NM_013375.2	ILMN_11701	ABT1	NM_013375.2	NM_013375.2		29777	17572813	NM_013375.2	ABT1	NP_037507.1	ILMN_1658083	0006480392	S	1836	CCTGGGTGGAGTGTTGAGTTGGAACCATTGTAAAGGTGGGCAAAGCCTAG	6	+	26599859-26599908	6p22.1d	Homo sapiens activator of basal transcription 1 (ABT1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10648625] [evidence TAS]; Any complex, distinct from RNA polymerase, including one or more polypeptides capable of binding DNA at promoters or at cis-acting regulatory sequences, and regulating transcription [goid 5667] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10648625] [evidence TAS]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10648625] [evidence TAS]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Any function that supports basal (unregulated) transcription of genes by core RNA polymerase II. Five general transcription factors are necessary and sufficient for such basal transcription in yeast: TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBF) [goid 16251] [pmid 10648625] [evidence TAS]	hABT1	hABT1
Homo sapiens	RefSeq	NM_032164.2	ILMN_25541	ZNF394	NM_032164.2	NM_032164.2		84124	31982908	NM_032164.2	ZNF394	NP_115540.2	ILMN_2115949	0003310592	S	1795	GAATTCATCAAAATAAAGTGCTGTCGGCTGGGCGTGGTGGCTCACGCCTA	7	-	99091154-99091203	7q22.1b	Homo sapiens zinc finger protein 394 (ZNF394), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12298; ZKSCAN14	FLJ12298; ZKSCAN14
Homo sapiens	RefSeq	NM_032164.2	ILMN_25541	ZNF394	NM_032164.2	NM_032164.2		84124	31982908	NM_032164.2	ZNF394	NP_115540.2	ILMN_1807514	0000110739	S	1361	CCTGACCAAGCACCAGAGGACACACACAGGCGAGAAGCCGTACACCTGTC	7	-	99091588-99091637	7q22.1b	Homo sapiens zinc finger protein 394 (ZNF394), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ12298; ZKSCAN14	FLJ12298; ZKSCAN14
Homo sapiens	RefSeq	NM_000021.2	ILMN_28849	PSEN1	NM_000021.2	NM_000021.2		5663	21536454	NM_000021.2	PSEN1	NP_000012.1	ILMN_1809193	0004850725	I	43	AAAACAGCGGCTGGTCTGGAAGGAACCTGAGCTACGAGCCGCGGCGGCAG	14	+	72672974-72673023	14q24.2b	Homo sapiens presenilin 1 (Alzheimer disease 3) (PSEN1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 9298903] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8878479] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the nuclear inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5639] [pmid 9298903] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [pmid 9246482] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12377771] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15274632] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15274632] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15274632] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IEA]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IEA]; The process whereby precursor cell type acquires the specialized features of a hemopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells [goid 2244] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2286] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage [goid 2573] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [pmid 15274632] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10805794] [evidence TAS]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 10206644] [evidence TAS]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IEA]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [pmid 15274632] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 11953314] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [pmid 15274632] [evidence IDA]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [pmid 9689133] [evidence IDA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [pmid 15274632] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; Any process that activates or increases the activity of an enzyme [goid 43085] [pmid 15274632] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IEA]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [pmid 8755489] [evidence IDA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [pmid 11104755] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PS1; AD3; FAD; S182	PS1; AD3; FAD; S182
Homo sapiens	RefSeq	NM_007319.1	ILMN_28849	PSEN1	NM_000021.2	NM_000021.2		5663	21536454	NM_000021.2	PSEN1	NP_000012.1	ILMN_1796669	0005700538	A	1352	CCTCGCTGGTGAAGACCCAGAGGAAAGGGGAGTAAAACTTGGATTGGGAG	14	+	72748378-72748403:72753587-72753610	14q24.2b	Homo sapiens presenilin 1 (Alzheimer disease 3) (PSEN1), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules [goid 776] [pmid 9298903] [evidence TAS]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8878479] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Located such that some or all of the gene product itself penetrates at least one phospholipid bilayer of the nuclear inner membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5639] [pmid 9298903] [evidence TAS]; The outer, i.e. cytoplasm-facing, lipid bilayer of the nuclear envelope; continuous with the endoplasmic reticulum of the cell and sometimes studded with ribosomes [goid 5640] [pmid 9246482] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12377771] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 15274632] [evidence IDA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 15274632] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 15274632] [evidence IDA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter [goid 30424] [evidence IEA]; A branching protoplasmic process of a neuron that receive and integrate signals coming from axons of other neurons, and convey the resulting signal to the body of the cell [goid 30425] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; A cytoskeleton-like structure, originating from the basal body at the proximal end of a cilium, and extending proximally toward the cell nucleus. Rootlets are typically 80-100 nm in diameter and contain cross striae distributed at regular intervals of approximately 55-70 nm [goid 35253] [evidence IEA]; The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections [goid 43025] [evidence IEA]	The process whose specific outcome is the progression of the blood vessel over time, from its formation to the mature structure. The blood vessel is the vasculature carrying blood [goid 1568] [evidence IEA]; The process involved in the specification of cell identity. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment [goid 1708] [evidence IEA]; The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo [goid 1756] [evidence IEA]; The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that stops, prevents or decreases the rate of addition of phosphate groups to amino acids within a protein [goid 1933] [evidence IEA]; The characteristic morphogenetic movements where the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceeding their future integration [goid 1947] [evidence IEA]; The process whereby precursor cell type acquires the specialized features of a hemopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells [goid 2244] [evidence IEA]; The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response [goid 2286] [evidence IEA]; The process whereby a relatively unspecialized myeloid precursor cell acquires the specialized features of any cell of the myeloid leukocyte lineage [goid 2573] [evidence IEA]; The addition of a sugar unit to a protein amino acid, e.g. the addition of glycan chains to proteins [goid 6486] [evidence IEA]; The proteolytic cleavage of transmembrane proteins and release of their ectodomain (extracellular domain) [goid 6509] [pmid 15274632] [evidence IDA]; A process which directly inhibits any of the steps required for cell death by apoptosis [goid 6916] [pmid 10805794] [evidence TAS]; The process by which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets [goid 7059] [pmid 10206644] [evidence TAS]; Any process that modulates the frequency, rate or extent of EGF receptor activity [goid 7176] [evidence IEA]; The series of successive proteolytic cleavage events that take place after a Notch receptor binds a ligand, and which lead to the release of the Notch Intracellular Domain (NICD), which is the active form of the receptor [goid 7220] [pmid 15274632] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The activities involved in the mental information processing system that receives (registers), modifies, stores, and retrieves informational stimuli. The main stages involved in the formation and retrieval of memory are encoding (processing of received information by acquisition), storage (building a permanent record of received information as a result of consolidation) and retrieval (calling back the stored information and use it in a suitable way to execute a given task) [goid 7613] [evidence IEA]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [evidence IEA]; The process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure. See embryonic development [goid 9791] [evidence IEA]; The attachment of one cell to another cell via adhesion molecules [goid 16337] [pmid 11953314] [evidence IMP]; The posttranslational modification of a protein, particularly secretory proteins and proteins targeted for membranes or specific cellular locations [goid 16485] [pmid 15274632] [evidence IDA]; The process by which the neural tube is regionalized in the dorsoventral axis [goid 21904] [evidence IEA]; The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. Morphogenesis pertains to the creation of form. A limb is an appendage of an animal used for locomotion or grasping [goid 30326] [evidence IEA]; The process whose specific outcome is the progression of the forebrain over time, from its formation to the mature structure. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions) [goid 30900] [evidence IEA]; Self-propelled movement of a cell or organism from one location to another [goid 40011] [evidence IEA]; Any process that modulates the frequency, rate or extent of addition of phosphate groups into a molecule [goid 42325] [pmid 9689133] [evidence IDA]; The growth phase of the hair cycle. Lasts, for example, about 3 to 6 years for human scalp hair [goid 42640] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of amyloid precursor protein (APP), the precursor of beta-amyloid, a glycoprotein associated with Alzheimer's disease [goid 42987] [pmid 15274632] [evidence TAS]; Any process that activates or increases the frequency, rate or extent of cell death by apoptosis [goid 43065] [evidence IEA]; Any process that activates or increases the activity of an enzyme [goid 43085] [pmid 15274632] [evidence IDA]; Any process that activates or increases the frequency, rate or extent of protein kinase activity [goid 45860] [evidence IEA]; A process that modulates synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers [goid 48167] [evidence IEA]; The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components [goid 48538] [evidence IEA]; The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 48854] [evidence IEA]; The chemical reactions and pathways involving beta-amyloid, a glycoprotein associated with Alzheimer's disease, and its precursor, amyloid precursor protein (APP) [goid 50435] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of coagulation [goid 50820] [evidence IEA]; A series of molecular signals initiated by the cross-linking of an antigen receptor on a T cell [goid 50852] [evidence IEA]; The regulation of the levels, transport, and metabolism of calcium ions within the smooth endoplasmic reticulum of a cell or between the smooth endoplasmic reticulum and its surroundings [goid 51563] [evidence IEA]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain [goid 4175] [pmid 8755489] [evidence IDA]; Interacting selectively with the beta subunit of the catenin complex [goid 8013] [pmid 11104755] [evidence IPI]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PS1; AD3; FAD; S182	PS1; AD3; FAD; S182
Homo sapiens	RefSeq	NM_002805.4	ILMN_14538	PSMC5	NM_002805.4	NM_002805.4		5705	24497434	NM_002805.4	PSMC5	NP_002796.4	ILMN_1780189	0006580646	S	1181	GGAGGACTTTGAGATGGCAGTAGCCAAGGTCATGCAGAAGGACAGTGAGA	17	+	59262875-59262902:59263008-59263029	17q23.3b	Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase, 5 (PSMC5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups [goid 43234] [evidence IEA]; A large multisubunit complex which catalyzes protein degradation. This complex consists of the barrel shaped proteasome core complex and one or two associated proteins or complexes that act in regulating entry into or exit from the core [goid 502] [pmid 9464850] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 9927201] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 9927201] [evidence IDA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]	Any process that stops, prevents or reduces the frequency, rate or extent of transcription [goid 16481] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 7870181] [evidence TAS]; The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds [goid 30163] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by the anaphase-promoting complex, and mediated by the proteasome [goid 31145] [pmid 11285280] [evidence EXP]; Any process that stops, prevents or reduces the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes [goid 43069] [pmid 16432160] [evidence NAS]; Any process that activates or increases the frequency, rate or extent of the DNA-dependent transcription of a specific gene or genes [goid 43193] [pmid 7870181] [evidence NAS]; Any process that stops, prevents or reduces the frequency, rate or extent of ubiquitin ligase activity during the mitotic cell cycle [goid 51436] [pmid 15029244] [evidence EXP]; Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the mitotic cell cycle [goid 51437] [pmid 12791267] [evidence EXP]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate [goid 17111] [evidence IEA]; Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; The function that links a sequence-specific transcription factor to the core RNA polymerase II complex but does not bind DNA itself [goid 3712] [pmid 7870181] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Catalysis of the reaction: ATP + H2O = ADP + phosphate. May or may not be coupled to another reaction [goid 16887] [pmid 9464850] [evidence TAS]; Interacting selectively with a receptor for thyrotropin-releasing hormone, a tripeptide hormone that is produced by the hypothalamus and stimulates the release of thyroid-stimulating hormone (TSH) and prolactin by the anterior pituitary [goid 31531] [pmid 7870181] [evidence IPI]	SUG1; S8; p45; TRIP1; p45/SUG; TBP10	SUG1; S8; p45; TRIP1; p45/SUG; TBP10
Homo sapiens	RefSeq	XM_943559.1	ILMN_138326	BRUNOL4	XM_943559.1	XM_943559.1		56853	89047368	XM_943559.1	BRUNOL4	XP_948652.1	ILMN_1714669	0002320193	I	555	TAGTACCCACCTCCACCTGGGTCATCCTACCCTAGAGCCTCCATCCTCTG				18q12.2b-q12.2c	PREDICTED: Homo sapiens bruno-like 4, RNA binding protein (Drosophila), transcript variant 3 (BRUNOL4), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process whose specific outcome is the progression of the immature germ cell over time, from its formation to the mature structure (gamete) [goid 7281] [pmid 10893231] [evidence NAS]; The process whose specific outcome is the progression of an embryo from its formation until the end of its embryonic life stage. The end of the embryonic stage is organism-specific. For example, for mammals, the process would begin with zygote formation and end with birth. For insects, the process would begin at zygote formation and end with larval hatching. For plant zygotic embryos, this would be from zygote formation to the end of seed dormancy. For plant vegetative embryos, this would be from the initial determination of the cell or group of cells to form an embryo until the point when the embryo becomes independent of the parent plant [goid 9790] [pmid 10893231] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Antagonizes the ribosome-mediated translation of mRNA into a polypeptide via direct binding to nucleic acid [goid 900] [pmid 10893231] [evidence NAS]; Interacting selectively with the RNA element BRE (Bruno response element) [goid 42835] [evidence ISS]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]		
Homo sapiens	RefSeq	NM_016598.1	ILMN_24246	ZDHHC3	NM_016598.1	NM_016598.1		51304	7706132	NM_016598.1	ZDHHC3	NP_057682.1	ILMN_2201347	0005420593	S	2304	CCCATTGGCCAGAATCCACAGACACACCTAAGCCTGTGGCACTGGGACAG	3	-	44942029-44942078	3p21.31k	Homo sapiens zinc finger, DHHC-type containing 3 (ZDHHC3), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the generalized reaction: acyl-carrier + reactant = acyl-reactant + carrier [goid 8415] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	GODZ; ZNF373	GODZ; ZNF373
Homo sapiens	RefSeq	XM_933591.1	ILMN_33061	LOC646403	XM_933591.1	XM_933591.1		646403	89036665	XM_933591.1	LOC646403	XP_938684.1	ILMN_1667195	0002060682	S	61	CACTTCATTTGATTTCTTTAAACATTTTACTTGGCCTGCTGTTTAATCAG	13	-	24395754-24395803		PREDICTED: Homo sapiens hypothetical protein LOC646403 (LOC646403), mRNA.					
Homo sapiens	RefSeq	NM_005658.3	ILMN_5830	TRAF1	NM_005658.3	NM_005658.3		7185	53759116	NM_005658.3	TRAF1	NP_005649.1	ILMN_1698218	0004570768	S	3787	TCCCTACTCACCGAGTGTTGAGCCCAAGGGGGGATTTGTAGAACAAGCCC	9	-	123665284-123665333	9q33.2a	Homo sapiens TNF receptor-associated factor 1 (TRAF1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8069916] [evidence TAS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 8069916] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10809768] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9162022] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC:10353; EBI6	MGC:10353; EBI6
Homo sapiens	RefSeq	NM_005658.3	ILMN_5830	TRAF1	NM_005658.3	NM_005658.3		7185	53759116	NM_005658.3	TRAF1	NP_005649.1	ILMN_2171789	0000110021	S	4170	TGCAGAGGATGGGGAAAAGGGAAGAGTACCGACTTGAAAACGGAGAGCTG	9	-	123664901-123664950	9q33.2a	Homo sapiens TNF receptor-associated factor 1 (TRAF1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8069916] [evidence TAS]	The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 8069916] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; Any process that modulates the occurrence or rate of cell death by apoptosis [goid 42981] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 10809768] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9162022] [evidence IPI]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]	MGC:10353; EBI6	MGC:10353; EBI6
Homo sapiens	RefSeq	NM_017554.1	ILMN_28517	PARP14	NM_017554.1	NM_017554.1		54625	50512291	NM_017554.1	PARP14	NP_060024.1	ILMN_1691731	0004150692	S	6513	GAAGTGGAGGAGGCTAGGGGGCCACAGTTGCTGCTTCATTAACATAGAGG	3	+	123932009-123932058	3q21.1a	Homo sapiens poly (ADP-ribose) polymerase family, member 14 (PARP14), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]	KIAA1268; BAL2	KIAA1268; BAL2
Homo sapiens	RefSeq	XM_929729.1	ILMN_167304	LOC644131	XR_017481.1	XR_017481.1		644131	113411361	XR_017481.1	LOC644131		ILMN_1798940	0007650424	S	1523	ACTTCAGGGCTCTACAGACAATCTGATGGATGACATAGAAAGGGCAGTAG	1	-	145141961-145142010	1q21.1c	PREDICTED: Homo sapiens similar to chaperonin containing TCP1, subunit 8 (theta) (LOC644131), mRNA.					
Homo sapiens	RefSeq	NM_002170.3	ILMN_169391	IFNA8	NM_002170.3	NM_002170.3		3445	115583655	NM_002170.3	IFNA8	NP_002161.2	ILMN_2110561	0006940291	S	642	GCAGCTCACACTTCGACAAGTTGTGCTCTTTCAAAGACCCTTGTTTCTGC	9	+	21399787-21399836	9p21.3c	Homo sapiens interferon, alpha 8 (IFNA8), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack [goid 6952] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus [goid 9615] [evidence IEA]	 [goid 5126] [pmid 6163083] [evidence TAS]		
Homo sapiens	RefSeq	NM_178168.1	ILMN_25009	OR10A5	NM_178168.1	NM_178168.1		144124	30039687	NM_178168.1	OR10A5	NP_835462.1	ILMN_1704575	0007320138	S	877	TTGAGAAATAGCGAGGTGAAGAATGCCCTCAGCAGGACCTTCCACAAGGT	11	+	6824366-6824415	11p15.4b	Homo sapiens olfactory receptor, family 10, subfamily A, member 5 (OR10A5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [pmid 9787077] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [pmid 9787077] [evidence NAS]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [pmid 9787077] [evidence NAS]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	JCG6; OR10A1; OR11-403	JCG6; OR10A1; OR11-403
Homo sapiens	RefSeq	NM_001048241.1	ILMN_168906	UBL5	NM_001048241.1	NM_001048241.1		59286	115387111	NM_001048241.1	UBL5	NP_001041706.1	ILMN_2340065	0006420541	A	263	CCACGTGTCTCTGGGGGACTATGAAATCCACGATGGGATGAACCTGGAGC	19	+	9800531-9800550:9801641-9801670	19p13.2c	Homo sapiens ubiquitin-like 5 (UBL5), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 21100898] [evidence IDA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	HUB1; MGC131795; FLJ46917	HUB1; MGC131795; FLJ46917
Homo sapiens	RefSeq	NM_031450.2	ILMN_27447	C11ORF68	NM_031450.2	NM_031450.2		83638	31543378	NM_031450.2	C11orf68	NP_113638.1	ILMN_1757847	0004050446	S	1270	CCCCTCAGGAGAGAGAAAACTTAGTGCTTCCAGCCCTTCTTGGAGCCTTC	11	-	65441094-65441143	11q13.1d	Homo sapiens chromosome 11 open reading frame 68 (C11orf68), mRNA.				P5326; Bles03	P5326; Bles03
Homo sapiens	RefSeq	NM_004529.1	ILMN_5590	MLLT3	NM_004529.1	NM_004529.1		4300	4758719	NM_004529.1	MLLT3	NP_004520.1	ILMN_1812473	0002760066	S	3142	ATTTCCAGAAGGATTTCTTGTATTGGTGAAAGACGGTTGGGGATGGGGGG	9	-	20335151-20335200	9p21.3d	Homo sapiens myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (MLLT3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8506309] [evidence TAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The process whereby segments assume individual identities; exemplified in insects by the actions of the products of the homeotic genes [goid 7379] [evidence IEA]; The regionalization process by which specific areas of cell differentiation are determined along the anterior-posterior axis [goid 9952] [evidence IEA]		FLJ2035; AF9; YEATS3	FLJ2035; AF9; YEATS3
Homo sapiens	RefSeq	XM_935719.1	ILMN_35209	LOC641815	XM_935719.1	XM_935719.1		641815	89027565	XM_935719.1	LOC641815	XP_940812.1	ILMN_1668541	0000060451	S	143	TGTTGTTGTTCCCTGCCACATTGATGAGGTGGATACATATTCAGAAGGTG					PREDICTED: Homo sapiens hypothetical protein LOC641815 (LOC641815), mRNA.					
Homo sapiens	RefSeq	NM_003794.2	ILMN_176779	SNX4	NM_003794.2	NM_003794.2		8723	23111044	NM_003794.2	SNX4	NP_003785.1	ILMN_1738736	0007330014	S	2153	CTGCTTGGCTCTCTACACATGGCATTTCAGGGTATAAGATGTAGCATTTC	3	-	126648505-126648554	3q21.2b	Homo sapiens sorting nexin 4 (SNX4), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 11279102] [evidence IDA]	A type of vesicle-mediated transport in which cells take up external materials or membrane constituents by the invagination of small region of the plasma membrane to form a new membrane-bounded vesicle [goid 6897] [pmid 9819414] [evidence TAS]; Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment [goid 7154] [evidence IEA]; The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11279102] [evidence IPI]; Interacting selectively with any inositol-containing glycerophospholipid [goid 35091] [evidence IEA]		
Homo sapiens	RefSeq	XM_001719721.1	ILMN_340017	LOC100134357	XM_001719721.1	XM_001719721.1		100134357	169173125	XM_001719721.1	LOC100134357	XP_001719773.1	ILMN_3239606	0004390544	S	494	GTGACTAAGGCTCAGTCCCTGAAGAGTGCCTTGGCATGGGCTGCTTTAGG					PREDICTED: Homo sapiens hypothetical LOC100134357 (LOC100134357), mRNA.					
Homo sapiens	RefSeq	XM_930819.1	ILMN_40153	LOC642439	XM_930819.1	XM_930819.1		642439	89058210	XM_930819.1	LOC642439	XP_935912.1	ILMN_1789957	0001110292	S	181	GAACTCCCACCTCCACAGACCCGTCCGGGTGCTGAAAGTCCACGGATGCT	21	+	44111587-44111631:44111632-44111636		PREDICTED: Homo sapiens hypothetical protein LOC642439 (LOC642439), mRNA.					
Homo sapiens	Unigene	Hs.47141	ILMN_72790	HS.47141	Hs.47141		Hs.47141		27843385	BX097731			ILMN_1893850	0000730681	S	240	TGGGGAGGGGGACAATATTTGAAGATTTAAATGGTCACTGCTACTGCTGC	12	-	71884295-71884344		BX097731 Soares_multiple_sclerosis_2NbHMSP Homo sapiens cDNA clone IMAGp998C11622, mRNA sequence					
Homo sapiens	RefSeq	XR_019395.1	ILMN_172889	LOC401730	XR_019395.1	XR_019395.1		401730	113424279	XR_019395.1	LOC401730		ILMN_3287459	0006110136	M	892	AGAGGCTTAAGTGGGCAAAAACTTGTCCAAGATGTATGCTCGTCACAGGA				13q12.12a	PREDICTED: Homo sapiens misc_RNA (LOC401730), miscRNA.					
Homo sapiens	Unigene	Hs.539427	ILMN_104512	HS.539427	Hs.539427		Hs.539427		2953064	AA860924			ILMN_1884675	0006350338	S	64	CCTGGAAGAGCCGATGAATACTGGGGACGAGGTGCAATTAGGGAATCGGT	12	-	32800550-32800599		ak22d04.s1 Soares_testis_NHT Homo sapiens cDNA clone IMAGE:1406695 3, mRNA sequence					
Homo sapiens	RefSeq	NM_005245.3	ILMN_24617	FAT1	NM_005245.3	NM_005245.3		2195	75813622	NM_005245.3	FAT1	NP_005236.2	ILMN_3247578	0005390164	S	14118	CCCAACTACTGTCATCGTGAGGTTTTCATCGGCTGTGCCATTTCCCAACG	4	-	187746527-187746576	4q35.2a	Homo sapiens FAT tumor suppressor homolog 1 (Drosophila) (FAT1), mRNA.				ME5; hFat1; CDHF7; FAT1	ME5; hFat1; CDHF7; FAT1
Homo sapiens	RefSeq	NM_005245.3	ILMN_24617	FAT1	NM_005245.3	NM_005245.3		2195	75813622	NM_005245.3	FAT1	NP_005236.2	ILMN_1754795	0004280100	S	14589	GGAAAGTGTAACGGGGACCTTCTGCATACCTGTTTAGAACCAAAACCACC	4	-	187746056-187746105	4q35.2a	Homo sapiens FAT tumor suppressor homolog 1 (Drosophila) (FAT1), mRNA.				ME5; hFat1; CDHF7; FAT1	ME5; hFat1; CDHF7; FAT1
Homo sapiens	RefSeq	NM_023107.2	ILMN_9604	FGFR1	NM_023107.2	NM_023107.2		2260	105990518	NM_023107.2	FGFR1	NP_075595.1	ILMN_2398261	0006450471	A	1506	TAAGGTGTACAGTGACCCGCAGCCGCACATCCAGTGGCTAAAGCACATCG	8	-	38401239-38401288	8p12a	Homo sapiens fibroblast growth factor receptor 1 (FGFR1), transcript variant 5, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 16597617] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9139660] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 17086194] [evidence EXP]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 10918587] [evidence TAS]	Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways [goid 165] [pmid 10748122] [evidence TAS]; The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 7874169] [evidence TAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 1846977] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 2159626] [evidence NAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 2159626] [evidence NAS]; The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands [goid 8543] [pmid 17086194] [evidence EXP]; The process by which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present [goid 16049] [evidence NAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 2167437] [evidence TAS]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 2159626] [evidence NAS]; Combining with fibroblast growth factor to initiate a change in cell activity [goid 5007] [pmid 1846977] [evidence NAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 9660748] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8753773] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence NAS]; Interacting selectively with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha1-4-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues [goid 8201] [evidence NAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CEK; N-SAM; FLT2; BFGFR; FLG; KAL2; HBGFR; CD331; FGFBR	CEK; N-SAM; FLT2; BFGFR; FLG; KAL2; HBGFR; CD331; FGFBR
Homo sapiens	RefSeq	NR_002736.1	ILMN_6346	SNORD60	NR_002736.1	NR_002736.1		26788	84872016	NR_002736.1	SNORD60		ILMN_3238481	0001190398	S	2	GTCTGTGATGAATTGCTTTGACTTCTGACACCTCGTATGAAAACTGCACG	16	-	2205055-2205104	16p13.3d	Homo sapiens small nucleolar RNA, C/D box 60 (SNORD60), small nuclear RNA.				RNU60; U60	RNU60; U60
Homo sapiens	Unigene	Hs.561599	ILMN_114970	HS.561599	Hs.561599		Hs.561599		19045694	BM724363			ILMN_1867859	0000830707	S	149	CCCTTCACAGAAACATCTAGGCTGGGATTTGACCAAACAACTGGGCACTG					UI-E-EO1-aiz-a-04-0-UI.r1 UI-E-EO1 Homo sapiens cDNA clone UI-E-EO1-aiz-a-04-0-UI 5, mRNA sequence					
Homo sapiens	RefSeq	NM_000645.1	ILMN_1173	AGL	NM_000645.1	NM_000645.1		178	4557282	NM_000645.1	AGL	NP_000636.1	ILMN_1750235	0006110050	I	41	GAATGTACGTTTCCAGGGGAAGGAGAAAGAGACATTACAGAGCAGACAGC	1	+	100099394-100099443	1p21.2a	Homo sapiens amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (glycogen debranching enzyme, glycogen storage disease type III) (AGL), transcript variant 5, mRNA.	That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 9691087] [evidence EXP]; A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages [goid 43033] [pmid 1374391] [evidence TAS]	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule [goid 5975] [evidence IEA]; The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues [goid 5978] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]; Catalysis of the transfer of a segment of a (1,4)-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or (1,4)-alpha-D-glucan [goid 4134] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [evidence IEA]; Catalysis of the hydrolysis of (1,6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the 1,6 glycosidic linkages present [goid 4135] [pmid 9691087] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor) [goid 16757] [evidence IEA]; Catalysis of the hydrolysis of any glycosyl bond [goid 16798] [evidence IEA]; Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge [goid 43169] [evidence IEA]	GDE	GDE
Homo sapiens	RefSeq	XM_925777.1	ILMN_307683	FAM39DP	NR_003659.1	NR_003659.1		374666	153791616	NR_003659.1	FAM39DP		ILMN_1723657	0007560438	A	11543	TGTCCCTACTGAGAGTGCAGGGAACTCAGCACCGTCAACTCCTCGACCCT				15q26.3d	Homo sapiens family with sequence similarity 39, member D pseudogene (FAM39DP) on chromosome 15.				FLJ25222	
Homo sapiens	RefSeq	NM_199163.2	ILMN_307683	FAM39DP	NR_003659.1	NR_003659.1		374666	153791616	NR_003659.1	FAM39DP		ILMN_1785528	0001240441	S	15502	CTCTGACATGGACACAGCCAGGACAAGCTGCTCAGACCTACTTCCTTGGG				15q26.3d	Homo sapiens family with sequence similarity 39, member D pseudogene (FAM39DP) on chromosome 15.				FLJ25222	
Homo sapiens	RefSeq	NM_182905.1	ILMN_307683	FAM39DP	NR_003659.1	NR_003659.1		374666	153791616	NR_003659.1	FAM39DP		ILMN_1739199	0001580053	S	15405	CCACCGCAGCAGCCACAGGCAGAGGAGGACGAGGACGACTGGGAATCCTA				15q26.3d	Homo sapiens family with sequence similarity 39, member D pseudogene (FAM39DP) on chromosome 15.				FLJ25222	
Homo sapiens	RefSeq	XM_928155.1	ILMN_307683	FAM39DP	NR_003659.1	NR_003659.1		374666	153791616	NR_003659.1	FAM39DP		ILMN_1768861	0005080500	S	14095	CAAACGAGGAGCCCTGCGCTGGGGAGGCCGGACCTTTGGAGACGGTGTGT				15q26.3d	Homo sapiens family with sequence similarity 39, member D pseudogene (FAM39DP) on chromosome 15.				FLJ25222	
Homo sapiens	RefSeq	XM_933055.1	ILMN_307683	FAM39DP	NR_003659.1	NR_003659.1		374666	153791616	NR_003659.1	FAM39DP		ILMN_1713406	0006110609	A	15608	CTTGAGGCCACACAGCTGGGGCGGGGACTTCTGTCTGCCTGTGCTCCATG				15q26.3d	Homo sapiens family with sequence similarity 39, member D pseudogene (FAM39DP) on chromosome 15.				FLJ25222	
Homo sapiens	RefSeq	NM_020933.2	ILMN_22884	ZNF317	NM_020933.2	NM_020933.2		57693	19923567	NM_020933.2	ZNF317	NP_065984.2	ILMN_1680347	0003290768	S	3916	CCACAGTCTAAGGAAGTGACTGCAGAAAGCTCACAGCGACCCTGGCCTCC	19	+	9134949-9134998	19p13.2d	Homo sapiens zinc finger protein 317 (ZNF317), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	KIAA1588	KIAA1588
Homo sapiens	RefSeq	NM_206938.1	ILMN_17690	MS4A7	NM_206938.1	NM_206938.1		58475	46249346	NM_206938.1	MS4A7	NP_996821.1	ILMN_2331087	0003840564	A	1317	CCTCTCAACACACAGCAAGCATGTCCCTGCCTCCCATGAATCTTACCATG	11	+	59918446-59918495	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 7 (MS4A7), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CFFM4; MGC22368; MS4A8; 4SPAN2; CD20L4	CFFM4; MGC22368; MS4A8; 4SPAN2; CD20L4
Homo sapiens	RefSeq	NM_206938.1	ILMN_17690	MS4A7	NM_206938.1	NM_206938.1		58475	46249346	NM_206938.1	MS4A7	NP_996821.1	ILMN_2331082	0000990328	A	2313	CAGTGCTCATTTTGAGATACCCTGCTATCGATGGTCGCTACAAACCAGGA	11	+	59919442-59919491	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 7 (MS4A7), transcript variant 2, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	CFFM4; MGC22368; MS4A8; 4SPAN2; CD20L4	CFFM4; MGC22368; MS4A8; 4SPAN2; CD20L4
Homo sapiens	RefSeq	NM_001133.2	ILMN_26262	AFM	NM_001133.2	NM_001133.2		173	27754774	NM_001133.2	AFM	NP_001124.1	ILMN_1777797	0003120681	S	1863	GCACCAAAGGGAAGGCTTCCTATCTGTGTGGTGATGAATCGCATTTCCTG	4	+	74368819-74368827:74369593-74369633	4q13.3d	Homo sapiens afamin (AFM), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 7517938] [evidence TAS]; That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid [goid 5615] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		MGC125338; ALBA; ALF; MGC125339; ALB2	MGC125338; ALBA; ALF; MGC125339; ALB2
Homo sapiens	RefSeq	NM_014381.1	ILMN_177472	MLH3	NM_014381.2	NM_014381.2		27030	91992159	NM_014381.2	MLH3	NP_055196.2	ILMN_1693107	0007560274	S	4930	AGGCTGCCCCCAGGGTTTCTGCACTGGTCCCCTCTTTTCCCTTCAGTCTT	14	-	75483311-75483360	14q24.3b	Homo sapiens mutL homolog 3 (E. coli) (MLH3), transcript variant 2, mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure [goid 793] [evidence IEA]; A proteinaceous scaffold found between homologous chromosomes during meiosis [goid 795] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10615123] [evidence TAS]; A connection formed between chromatids, visible during meiosis, thought to be the point of the interchange involved in crossing-over [goid 5712] [evidence IEA]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 12095912] [evidence NAS]; The cell cycle process whereby the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination [goid 7130] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 12095912] [evidence NAS]; Progression through the nuclear division phase of a meiotic cell cycle in the male germline [goid 7140] [evidence IEA]; The cell cycle process whereby the first meiotic division occurs in the female germline [goid 7144] [evidence IEA]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [evidence IEA]	Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [evidence IEA]; Interacting selectively with satellite DNA, DNA containing highly repetitive sequences which makes up a large proportion of the eukaryotic genome [goid 3696] [pmid 10615123] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12095912] [evidence NAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with centromere-associated DNA, usually characterized by highly repetitive sequences [goid 19237] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]	MGC138372; HNPCC7	HNPCC; S240II117; HNPCC7
Homo sapiens	RefSeq	NM_001018040.1	ILMN_178540	PMS2	NR_003085.1	NR_003085.1		5395	102470004	NR_003085.1	PMS2		ILMN_1677887	0005260168	A	79	GTTGCATCCATGGAGCGAGCTGAGAGCTCGAGAACCTGCTAAGGCCATCA	7	-	6012165-6012183:6015154-6015184	7p22.1b	Homo sapiens PMS2 postmeiotic segregation increased 2 (S. cerevisiae) (PMS2), transcript variant 2, transcribed RNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10871409] [evidence IC ]	A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [evidence IEA]; A system for the correction of errors introduced during DNA replication when an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination [goid 6298] [pmid 10871409] [evidence IDA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]	Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [pmid 10871409] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 11809883] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11793469] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with double-stranded DNA containing one or more mismatches [goid 30983] [evidence IEA]; Interacting selectively with double-stranded DNA containing a single base insertion or deletion [goid 32138] [pmid 10871409] [evidence IDA]; Interacting selectively with the mismatch repair complex MutSalpha [goid 32407] [pmid 16403449] [evidence IDA]	PMS2CL; HNPCC4; PMSL2	PMS2CL; HNPCC4; PMSL2
Homo sapiens	RefSeq	NM_024693.2	ILMN_30194	ECHDC3	NM_024693.2	NM_024693.2		79746	31542717	NM_024693.2	ECHDC3	NP_078969.2	ILMN_2072178	0005220612	S	1408	AGCAAAAGGTGGCAACCCATGGAGGCAGAAAGAAGGACGCCAGCCTGACC	10	+	11845852-11845901	10p14a	Homo sapiens enoyl Coenzyme A hydratase domain containing 3 (ECHDC3), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]	FLJ20909	FLJ20909
Homo sapiens	RefSeq	NM_018676.2	ILMN_6534	THSD1	NM_018676.2	NM_018676.2		55901	40805850	NM_018676.2	THSD1	NP_061146.1	ILMN_1733157	0000290091	A	2364	GAGCATTTCCAAGAGGCAAGTGGAACCCGTGGTCCATTAAACCCTCTCCC	13	-	51849928-51849977	13q14.3d	Homo sapiens thrombospondin, type I, domain containing 1 (THSD1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC74971; UNQ3010; TMTSP	MGC74971; UNQ3010; TMTSP
Homo sapiens	RefSeq	NM_018676.2	ILMN_6534	THSD1	NM_018676.2	NM_018676.2		55901	40805850	NM_018676.2	THSD1	NP_061146.1	ILMN_1696659	0001430035	I	1336	GTCTCACTTCCTTCCCCTCCAGTCCTGTCTGCCCTGGAATGTCCTTGGAG	13	-	51858194-51858243	13q14.3d	Homo sapiens thrombospondin, type I, domain containing 1 (THSD1), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; The external part of the cell wall and/or plasma membrane [goid 9986] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			MGC74971; UNQ3010; TMTSP	MGC74971; UNQ3010; TMTSP
Homo sapiens	Unigene	Hs.421720	ILMN_90622	HS.421720	Hs.421720		Hs.421720		19693047	AL709692			ILMN_1882348	0004250253	S	484	CAACAGGGCTAGAAGGGAAAGGGGTGCAATTTCTTGGGTCCTCTGTGTCC	4	+	140041084-140041133		DKFZp686D0463_r1 686 (synonym: hlcc3) Homo sapiens cDNA clone DKFZp686D0463 5, mRNA sequence					
Homo sapiens	RefSeq	XM_001724275.1	ILMN_339409	LOC100129638	XM_001724275.1	XM_001724275.1		100129638	169171370	XM_001724275.1	LOC100129638	XP_001724327.1	ILMN_3258171	0004730008	M	188	ACGTGTAGCAGATGTCAAACTCCATCTTGGCATCCTTGATGGCCTTGGCT				7p13d	PREDICTED: Homo sapiens hypothetical protein LOC100129638 (LOC100129638), mRNA.					
Homo sapiens	RefSeq	NM_001005194.1	ILMN_179215	OR8A1	NM_001005194.1	NM_001005194.1		390275	52353347	NM_001005194.1	OR8A1	NP_001005194.1	ILMN_1666148	0006400142	S	582	CTGTGACATCCTCCCTCTCATGAAGCTGTCCTGCTCTAGCACCTATGATG	11	+	123945756-123945805	11q24.2a	Homo sapiens olfactory receptor, family 8, subfamily A, member 1 (OR8A1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR11-318; OST025	OR11-318; OST025
Homo sapiens	RefSeq	XM_939611.1	ILMN_34916	LOC650520	XM_939611.1	XM_939611.1		650520	89036249	XM_939611.1	LOC650520	XP_944704.1	ILMN_1751802	0002320703	S	38	CTGCAGGGTCAAGCAGTATGCCGGGAGAAGCAGAGAGGGAAGAAATCTTT					PREDICTED: Homo sapiens hypothetical protein LOC650520 (LOC650520), mRNA.					
Homo sapiens	RefSeq	NM_007103.2	ILMN_8645	NDUFV1	NM_007103.2	NM_007103.2		4723	20149567	NM_007103.2	NDUFV1	NP_009034.2	ILMN_1786718	0000780487	S	1217	CCCCATGCCGTGAGGGTGTGGACTGGATGAACAAGGTGATGGCACGTTTC	11	+	67136011-67136025:67136167-67136201	11q13.2a	Homo sapiens NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa (NDUFV1), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 9878551] [evidence NAS]; A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. It contains about 25 different polypeptide subunits, including NADH dehydrogenase (ubiquinone), flavin mononucleotide and several different iron-sulfur clusters containing non-heme iron. The iron undergoes oxidation-reduction between Fe(II) and Fe(III), and catalyzes proton translocation linked to the oxidation of NADH by ubiquinone [goid 5747] [pmid 11112787] [evidence IMP]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 9878551] [evidence NAS]; The transfer of electrons from NADH to ubiquinone that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex I [goid 6120] [pmid 11112787] [evidence IC ]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]; A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient [goid 22900] [evidence IEA]	Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor [goid 3954] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 8288251] [evidence NAS]; Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [pmid 9878551] [evidence NAS]; Interacting selectively with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 10181] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD, or the reduced form, NADH [goid 51287] [evidence IEA]; Interacting selectively with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands [goid 51539] [evidence IEA]	UQOR1	UQOR1
Homo sapiens	RefSeq	XM_927749.1	ILMN_38698	LOC644640	XM_927749.1	XM_927749.1		644640	89029576	XM_927749.1	LOC644640	XP_932842.1	ILMN_1788142	0002510372	S	442	AGGAGACACCTAGAGCCTGCAACACCACGGCTCACCTCGCTGCGGATTTT	9	+	69017304-69017348:69060489-69060493		PREDICTED: Homo sapiens similar to N-acetylated-alpha-linked acidic dipeptidase II (NAALADase II) (LOC644640), mRNA.					
Homo sapiens	RefSeq	NR_029869.1	ILMN_388202	MIR377	NR_029869.1	NR_029869.1		494326	262206239	NR_029869.1	MIR377		ILMN_3308763	0006840563	S	1	TGAGCAGAGGTTGCCCTTGGTGAATTCGCTTTATTTATGTTGAATCACAC				14q32.31a	Homo sapiens microRNA 377 (MIR377), microRNA.					
Homo sapiens	RefSeq	XM_934880.1	ILMN_38364	LOC93556	XM_934880.1	XM_934880.1		93556	88965726	XM_934880.1	LOC93556	XP_939973.1	ILMN_1757038	0001580682	A	405	CGGAGCTGGCTGCACTTCAGAATGTCAGTGTGTGGAGGAGAATACCCTGG	3	+	170021694-170021743	3q26.2a	PREDICTED: Homo sapiens hypothetical protein BC011266, transcript variant 3 (LOC93556), mRNA.					
Homo sapiens	RefSeq	XM_942438.1	ILMN_308703	USP35	NM_020798.1	NM_020798.1		57558	148746182	NM_020798.1	USP35	NP_065849.1	ILMN_1739384	0006510468	A	3814	TGAGAAGAACAGAGACCGAGACCTGCCCCCTTACCAAGCGCCACTGCATG	11	+	77603018-77603067	11q14.1a	Homo sapiens ubiquitin specific peptidase 35 (USP35), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]; Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]		
Homo sapiens	RefSeq	NM_004772.1	ILMN_2442	C5ORF13	NM_004772.1	NM_004772.1		9315	4758865	NM_004772.1	C5orf13	NP_004763.1	ILMN_1680738	0000940471	S	1690	CAGGGCAGGCCTTGTTCTGAACTGTTTCGCTTCTGACTGTTAAACACCGA	5	-	111093165-111093214	5q22.1b	Homo sapiens chromosome 5 open reading frame 13 (C5orf13), mRNA.		Any process that modulates the frequency, rate or extent of activity of any TGF-beta receptor signaling pathway [goid 17015] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PTZ17; D4S114; PRO1873; P311	PTZ17; D4S114; PRO1873; P311
Homo sapiens	RefSeq	NM_201382.1	ILMN_24672	PLEC1	NM_201382.1	NM_201382.1		5339	41322918	NM_201382.1	PLEC1	NP_958784.1	ILMN_1736792	0006200397	I	14	CCCTCGGGCAGCCTGTTTCCCTCCCTGGTGGTTGTGGGTCACGTTGTCAC	8	-	145089990-145090039	8q24.3g	Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 8, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8633055] [evidence NAS]		Interacting selectively with monomeric or multimeric forms of actin, including actin filaments [goid 3779] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a muscle fiber [goid 8307] [pmid 8696340] [evidence TAS]	EBS1; PLTN; EBSO; PCN; PLEC1b; HD1	EBS1; HD1; PLTN; EBSO; PCN; PLEC1b
Homo sapiens	RefSeq	XM_937964.1	ILMN_11622	ALDH7A1	NM_001182.2	NM_001182.2		501	66348118	NM_001182.2	ALDH7A1	NP_001173.1	ILMN_1763461	0004150544	A	1442	GGGCAGAATCTTTCGCTGGCTTGGACCTAAAGGATCAGACTGTGGCATTG	5	-	125913567-125913593:125913787-125913809	5q23.2e	Homo sapiens aldehyde dehydrogenase 7 family, member A1 (ALDH7A1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence ISS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9417906] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence ISS]; Catalysis of the reaction: L-2-aminoadipate 6-semialdehyde + NADP+ + H2O = L-2-aminoadipate + NADPH + H+ [goid 4043] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	ATQ1; PDE; EPD	
Homo sapiens	RefSeq	NM_001182.2	ILMN_11622	ALDH7A1	NM_001182.2	NM_001182.2		501	66348118	NM_001182.2	ALDH7A1	NP_001173.1	ILMN_1687508	0000070102	I	1772	GACTGTGACAGTGACTAATCCCCCTATGACCCCAAAGCCCTGATTAAATC	5	-	125908404-125908453	5q23.2e	Homo sapiens aldehyde dehydrogenase 7 family, member A1 (ALDH7A1), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]	The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells [goid 6081] [evidence ISS]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [pmid 9417906] [evidence TAS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: an aldehyde + NAD+ + H2O = an acid + NADH + H+ [goid 4029] [evidence ISS]; Catalysis of the reaction: L-2-aminoadipate 6-semialdehyde + NADP+ + H2O = L-2-aminoadipate + NADPH + H+ [goid 4043] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	ATQ1; PDE; EPD	ATQ1; EPD; PDE
Homo sapiens	RefSeq	NM_173519.1	ILMN_4920	RLBP1L1	NM_173519.1	NM_173519.1		157807	27734848	NM_173519.1	RLBP1L1	NP_775790.1	ILMN_1745765	0003610491	S	2227	CCCTTGCCCCCACAACCCTCCTGCAACCATTAAAGATGTGGAGAAAGACC	8	+	62575518-62575567	8q12.2b-q12.3a	Homo sapiens retinaldehyde binding protein 1-like 1 (RLBP1L1), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]	FLJ37248; CRALBPL; MGC34646	FLJ37248; CRALBPL; MGC34646
Homo sapiens	RefSeq	NM_000546.2	ILMN_11285	TP53	NM_000546.3	NM_000546.3		7157	120407067	NM_000546.3	TP53	NP_000537.3	ILMN_1779356	0004180500	S	1820	CTGTGAAATGCTGGCATTTGCACCTACCTCACAGAGTGCATTGTGAGGGT	17	-	7513215-7513264	17p13.1d	Homo sapiens tumor protein p53 (TP53), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [pmid 12915590] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 16507995] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 7720704] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11080164] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12915590] [evidence IDA]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [pmid 12080348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 7720704] [evidence IDA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 12667443] [evidence IDA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [evidence IEA]; The dense fibrillar network lying on the inner side of the nuclear membrane [goid 16363] [pmid 11080164] [evidence IDA]	The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IEA]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IEA]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [evidence IEA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IEA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IEA]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IEA]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [evidence IEA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IEA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell [goid 2347] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IEA]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [evidence IEA]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [evidence IEA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; The vectorial transfer of a protein from the cytoplasm into the nucleus, through the nuclear pore and across the nuclear envelope [goid 60] [evidence IEA]; The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth [goid 1701] [evidence IEA]; The process by which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation [goid 1836] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell [goid 2347] [evidence IEA]; In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase [goid 6284] [pmid 15116721] [evidence TAS]; In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [pmid 7663514] [evidence IMP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 7587074] [evidence IDA]; The aggregation, arrangement and bonding together of a set of components to form a protein complex [goid 6461] [pmid 12915590] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism [goid 6974] [pmid 8986812] [evidence IEP]; The series of molecular signals generated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB [goid 6983] [pmid 14744935] [evidence IDA]; The process by which the cell cycle is halted during one of the normal phases (G1, S, G2, M) [goid 7050] [pmid 8675009] [evidence TAS]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [pmid 10065150] [evidence IMP]; Any process that stops, prevents or reduces the frequency, rate or extent of the proliferation of neuroblasts [goid 7406] [evidence IEA]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; Progression of the cell from its inception to the end of its lifespan [goid 7569] [pmid 12080348] [evidence IMP]; Any process by which a protein is transported to, or maintained in, a specific location [goid 8104] [pmid 16507995] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of DNA replication [goid 8156] [evidence IEA]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 10065150] [evidence TAS]; Any process induced by intracellular signals that directly activates any of the steps required for cell death by apoptosis [goid 8629] [pmid 16462759] [evidence TAS]; Upregulation of the activity of a caspase, any of a group of cysteine proteases involved in apoptosis, mediated by cytochrome c [goid 8635] [pmid 12667443] [evidence IDA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers [goid 9411] [evidence IEA]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of X-ray radiation. An X-ray is a form of electromagnetic radiation with a wavelength in the range of 10 nanometers to 100 picometers (corresponding to frequencies in the range 30 PHz to 3 EHz) [goid 10165] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum [goid 10332] [evidence IEA]; The formation of a covalent cross-link between RNA and a protein [goid 18144] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [pmid 10065150] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of cell growth [goid 30308] [pmid 8986812] [evidence IMP]; A cell cycle checkpoint that arrests cell cycle progression G1 phase in response to DNA damage [goid 31571] [evidence IEA]; A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose [goid 42149] [pmid 14744935] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [pmid 14744935] [evidence IDA]; A cascade of processes induced by the cell cycle regulator phosphoprotein p53, or an equivalent protein, in response to the detection of DNA damage and resulting in the initiation of apoptosis (programmed cell death) [goid 42771] [pmid 14654789] [evidence IDA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of cell death of neurons by apoptosis [goid 43525] [evidence IEA]; Any process by which an organism has an effect on an organism of a different species [goid 44419] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [pmid 17599062] [evidence IDA]; Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane [goid 46902] [pmid 15116721] [evidence TAS]; Any process that stops, prevents or reduces the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48147] [evidence IEA]; Any process that stops or reduces the activity of a helicase [goid 51097] [pmid 7663514] [evidence TAS]; The formation of a protein tetramer, a macromolecular structure consisting of four noncovalently associated identical or nonidentical subunits [goid 51262] [pmid 15116721] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Facilitates the base-pairing of complementary single-stranded DNA [goid 739] [pmid 8183576] [evidence IDA]; Interacting selectively with chromatin, the network of fibers of DNA and protein that make up the chromosomes of the eukaryotic nucleus during interphase [goid 3682] [pmid 17599062] [evidence IDA]; The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 7587074] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [pmid 11002423] [evidence TAS]; Interacting selectively with copper (Cu) ions [goid 5507] [pmid 7824276] [evidence IDA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 8183576] [evidence IDA]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 10065153] [evidence TAS]; Interacting selectively with any enzyme [goid 19899] [pmid 10666337] [evidence IPI]; Interacting selectively with any enzyme [goid 19899] [pmid 15577914] [evidence IPI]; Interacting selectively with any enzyme [goid 19899] [pmid 10666337] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Interacting selectively with a nonidentical protein to form a heterodimer [goid 46982] [pmid 10837489] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 11861836] [evidence IPI]; Interacting selectively with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport [goid 51087] [pmid 18086682] [evidence IPI]	p53; TRP53; LFS1	TRP53; p53; LFS1
Homo sapiens	RefSeq	NM_004289.5	ILMN_21009	NFE2L3	NM_004289.5	NM_004289.5		9603	46358355	NM_004289.5	NFE2L3	NP_004280.4	ILMN_1781810	0006940452	S	2299	GGCCTCAGGCCACAAAAAGGAAACCCAAAAGGGAAAGAGAAAGTGAGAAG	7	+	26191883-26191928:26191929-26191932	7p15.2b	Homo sapiens nuclear factor (erythroid-derived 2)-like 3 (NFE2L3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; The synthesis of RNA from a DNA template by RNA polymerase II (Pol II), originating at a Pol II-specific promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs) [goid 6366] [pmid 10037736] [evidence TAS]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 10037736] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 10037736] [evidence TAS]; Interacting selectively with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding [goid 43565] [evidence IEA]; The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits [goid 46983] [evidence IEA]	NRF3	NRF3
Homo sapiens	RefSeq	NM_152398.2	ILMN_18246	OCIAD2	NM_152398.2	NM_152398.2		132299	62244008	NM_152398.2	OCIAD2	NP_689611.1	ILMN_1772286	0003310025	A	442	GATTTGGATCATTGCCCAAAGTTGCACGCACTGCCTCCTTACCTGTGAGG	4	-	48887559-48887582:48896023-48896048	4p12a	Homo sapiens OCIA domain containing 2 (OCIAD2), transcript variant 2, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; A membrane-bounded organelle that carries materials newly ingested by endocytosis. It passes many of the materials to lysosomes for degradation [goid 5768] [evidence IEA]			DKFZp686C03164; MGC45416	DKFZp686C03164; MGC45416
Homo sapiens	RefSeq	NM_001017368.1	ILMN_18313	RFFL	NM_001017368.1	NM_001017368.1		117584	62865648	NM_001017368.1	RFFL	NP_001017368.1	ILMN_1664111	0007650630	I	78	TCTGAACATGGCTCCAGCGACCTCAGCCACAGGAACTAGAGACAGCTTGC	17	-	33390632-33390681	17q12a	Homo sapiens ring finger and FYVE-like domain containing 1 (RFFL), transcript variant 2, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; A membrane-bounded vesicle found in the cytoplasm of the cell [goid 16023] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]; The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF189; RNF34L	RNF189; RNF34L
Homo sapiens	RefSeq	XM_928037.1	ILMN_45214	LOC644957	XM_928037.1	XM_928037.1		644957	89035581	XM_928037.1	LOC644957	XP_933130.1	ILMN_1684084	0003830386	S	61	ACTCTCTTCACAGATGAGAGCTCTCTCGTAAATCAGGCAGTTCATAAGGC	12	-	59326556-59326605		PREDICTED: Homo sapiens hypothetical protein LOC644957 (LOC644957), mRNA.					
Homo sapiens	RefSeq	XM_001714459.1	ILMN_342837	LOC100133418	XM_001714459.1	XM_001714459.1		100133418	169205257	XM_001714459.1	LOC100133418	XP_001714511.1	ILMN_3241928	0003850598	S	208	CCGCCGCCCGACAGCGCGCCCGGAACATGCCAGCCTCGCGCAGCCTGCGC					PREDICTED: Homo sapiens hypothetical protein LOC100133418 (LOC100133418), mRNA.					
Homo sapiens	RefSeq	XM_931784.1	ILMN_34847	LOC653145	XM_931784.1	XM_931784.1		653145	89031012	XM_931784.1	LOC653145	XP_936877.1	ILMN_1668774	0004780324	I	1156	ATGGCAGCCATGCAGGGAGCACTCTGGCTGTGGTTGTGAAGCCCTGGCCA	10	-	46583503-46583552	10q11.22b	PREDICTED: Homo sapiens similar to Annexin A8 (Annexin VIII) (Vascular anticoagulant-beta) (VAC-beta), transcript variant 3 (LOC653145), mRNA.					
Homo sapiens	RefSeq	NM_021640.2	ILMN_29960	C12ORF10	NM_021640.3	NM_021640.3		60314	145275184	NM_021640.3	C12orf10	NP_067653.3	ILMN_1777765	0001260022	S	1138	CCGTGCCACCTTGGCCCAGCGCTCATACCTCCCACAAATCTCCTAGTCTA	12	+	51987155-51987200:51987201-51987204	12q13.13e	Homo sapiens chromosome 12 open reading frame 10 (C12orf10), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	The deposition or aggregation of coloring matter in an organism, tissue or cell [goid 43473] [pmid 16996721] [evidence NAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MYG; MST024; MSTP024; MYG1	MYG; MST024; MSTP024; MYG1
Homo sapiens	RefSeq	NM_152737.2	ILMN_6526	RNF182	NM_152737.2	NM_152737.2		221687	142373276	NM_152737.2	RNF182	NP_689950.1	ILMN_3243112	0006520593	S	2703	GTTGTGTGATGCAGGTACAGTGCGCCCATTCCAACTGGAATAGCAGTTTG	6	+	14087614-14087663	6p23b	Homo sapiens ring finger protein 182 (RNF182), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	FLJ40772; MGC33993	FLJ40772; MGC33993
Homo sapiens	Unigene	Hs.119933	ILMN_75594	HS.119933	Hs.119933		Hs.119933		27823535	BX088936			ILMN_1857113	0001260048	S	171	CTGTGAGCTCTGAGAGCACGGATCTTGTCATTTACATTGTTGTTCCCCAG	9	+	29206598-29206647		BX088936 Soares_testis_NHT Homo sapiens cDNA clone IMAGp998G123255 ; IMAGE:1292195, mRNA sequence					
Homo sapiens	RefSeq	NM_016379.2	ILMN_7837	VCX3A	NM_016379.2	NM_016379.2		51481	48762946	NM_016379.2	VCX3A	NP_057463.2	ILMN_2271568	0002650719	I	78	AGCAGAGGAATCTGTAGGAGAGAGGGATGATTGACGTCTTCGTATAGCCC	X	-	6463032-6463081	Xp22.31f	Homo sapiens variable charge, X-linked 3A (VCX3A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10903929] [evidence IEP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10903929] [evidence IMP]		MGC125796; VCX-A; VCX3; MGC125730; VCX8R; VCXA; MGC118976; VCX-8r	MGC125796; VCX-A; VCX3; MGC125730; VCX8R; VCXA; MGC118976; VCX-8r
Homo sapiens	RefSeq	NM_016379.2	ILMN_7837	VCX3A	NM_016379.2	NM_016379.2		51481	48762946	NM_016379.2	VCX3A	NP_057463.2	ILMN_2366642	0005360601	A	810	GCCAGGTGGAGGAACCACTGAGTCAGGAGAGCGAGATGGAAGAACTACCG	X	-	6461794-6461843	Xp22.31f	Homo sapiens variable charge, X-linked 3A (VCX3A), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence ISS]; A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome [goid 5730] [evidence ISS]	The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence ISS]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 10903929] [evidence IEP]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [pmid 10903929] [evidence IMP]		MGC125796; VCX-A; VCX3; MGC125730; VCX8R; VCXA; MGC118976; VCX-8r	MGC125796; VCX-A; VCX3; MGC125730; VCX8R; VCXA; MGC118976; VCX-8r
Homo sapiens	RefSeq	NM_001010980.3	ILMN_18136	C1ORF130	NM_001010980.3	NM_001010980.3		400746	109452609	NM_001010980.3	C1orf130	NP_001010980.1	ILMN_3246014	0006110528	S	3611	ATGAAGGCTTGGAGTTGGAGGGAAGAAGGGGAGATGGAGTGGTGAGGGCG	1	+	24808061-24808110	1p36.11d-p36.11c	Homo sapiens chromosome 1 open reading frame 130 (C1orf130), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			FLJ42528	FLJ42528
Homo sapiens	RefSeq	NM_004788.2	ILMN_175730	UBE4A	NM_004788.2	NM_004788.2		9354	38327028	NM_004788.2	UBE4A	NP_004779.2	ILMN_1739259	0000520706	S	5772	GGTGCAAGTGAAGGTGCCAGTTGCTATTTGATATCACACTCTACAAAAGC	11	+	117774786-117774835	11q23.3d	Homo sapiens ubiquitination factor E4A (UFD2 homolog, yeast) (UBE4A), mRNA.	A protein complex that includes a ubiquitin-protein ligase (E3) and other proteins that may confer substrate specificity on the complex [goid 151] [pmid 10089879] [evidence TAS]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [pmid 10089879] [evidence TAS]; The process by which one or more ubiquitin moieties are added to a protein [goid 16567] [evidence IEA]	Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine [goid 4842] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]	UFD2; KIAA0126; UBOX2; MGC133315; E4	UFD2; MGC133315; E4; KIAA0126; UBOX2
Homo sapiens	RefSeq	NR_004845.1	ILMN_347379	LOC644936	NR_004845.1	NR_004845.1		644936	164259358	NR_004845.1	LOC644936		ILMN_3235221	0003850168	S	1050	CATGGGATGCATTGTTACAGGAAGTCCCTTGCCCTCCTAAAAGCCACCTC	5	-	79595198-79595247	5q14.1d	Homo sapiens cytoplasmic beta-actin pseudogene (LOC644936), non-coding RNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	MGC102982	MGC102982
Homo sapiens	RefSeq	NM_002433.3	ILMN_19657	MOG	NM_002433.3	NM_002433.3		4340	56788384	NM_002433.3	MOG	NP_002424.3	ILMN_2310001	0005340463	A	1266	CTACTAGGGACCTGGGGAAGCAAAAACGAAAGCTGGGCAACATGCCTGCT	6	+	29639556-29639605	6p22.1a	Homo sapiens myelin oligodendrocyte glycoprotein (MOG), transcript variant beta1, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8530032] [evidence NAS]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [pmid 1373175] [evidence TAS]		MOG IG-2'; MGC26137	MOG IG-2'; MGC26137
Homo sapiens	RefSeq	NM_033414.2	ILMN_1143	ZNF622	NM_033414.2	NM_033414.2		90441	34147461	NM_033414.2	ZNF622	NP_219482.1	ILMN_1776109	0002970026	S	1601	TGCCCTGAGGACCAGTGAAAGACAGATCATAGGAGAGACCCTTTTGCTGC	5	-	16504669-16504718	5p15.1b	Homo sapiens zinc finger protein 622 (ZNF622), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]		Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC17552; ZPR9; MGC2485	MGC17552; ZPR9; MGC2485
Homo sapiens	Unigene	Hs.580568	ILMN_132749	HS.580568	Hs.580568		Hs.580568		82064016	DA886662			ILMN_1914707	0004730678	S	95	CTCGTGCACCCTCTGCTGGTCATCTCTACACCAGGACAAGAGGATCTGTG	2	+	171981005-171981054		DA886662 PUAEN2 Homo sapiens cDNA clone PUAEN2006996 5, mRNA sequence					
Homo sapiens	RefSeq	XM_926232.1	ILMN_39534	LOC642830	XM_926232.1	XM_926232.1		642830	88953323	XM_926232.1	LOC642830	XP_931325.1	ILMN_1673214	0004060286	S	149	TCGTGACCCGGAGAGGATCTGGACCATGTGTAGTCCTACCTGGATTGGGT	2	+	91582025-91582072:91582261-91582262		PREDICTED: Homo sapiens similar to N-acetylated-alpha-linked acidic dipeptidase II (NAALADase II) (LOC642830), mRNA.					
Homo sapiens	RefSeq	NM_198179.2	ILMN_23290	QRFPR	NM_198179.2	NM_198179.2		84109	157738684	NM_198179.2	QRFPR	NP_937822.2	ILMN_3241626	0004010736	S	1915	CCTTAAAAAAGCAACATGGAAGGCCAGGCACGGTGGCTCATGCCTGTAAT	4	-	122469629-122469678	4q27c	Homo sapiens pyroglutamylated RFamide peptide receptor (QRFPR), mRNA.				SP9155; MGC149217; AQ27	SP9155; MGC149217; AQ27
Homo sapiens	RefSeq	NM_174981.3	ILMN_14441	POTED	NM_174981.3	NM_174981.3		317754	153792283	NM_174981.3	POTED	NP_778146.2	ILMN_3241159	0006350132	S	1549	GCAGATAGAAGTGGCTGAACAGAAAATGAATTCTGAGCTTTCTCTTAGTC	21	+	13933794-13933830:13935537-13935549	21q11.2b	Homo sapiens POTE ankyrin domain family, member D (POTED), mRNA.				POTE-21; ANKRD21; POTE21; POTE	POTE-21; POTE21; POTE
Homo sapiens	RefSeq	XM_932990.1	ILMN_32056	LOC653275	XM_932990.1	XM_932990.1		653275	88953582	XM_932990.1	LOC653275	XP_938083.1	ILMN_1692652	0001440138	I	961	GGCCACATAGCATTTAGCAAAGTAGATCGATTCATCATTGAAGAAAGTCG	2	+	130997425-130997434:130997435-130997474	2q21.1c	PREDICTED: Homo sapiens similar to cryptic, transcript variant 2 (LOC653275), mRNA.					
Homo sapiens	Unigene	Hs.548433	ILMN_109849	HS.548433	Hs.548433		Hs.548433		6639487	AW262671			ILMN_1850240	0006060180	S	399	TGCCGAGGGTAGTATCTTTACCTCCAAGTGAGCAAGACAGGTCTCATCAC	14	-	51815172-51815221		xq93b01.x1 NCI_CGAP_Brn53 Homo sapiens cDNA clone IMAGE:2758153 3, mRNA sequence					
Homo sapiens	RefSeq	NM_138370.2	ILMN_369820	PKDCC	NM_138370.2	NM_138370.2		91461	208431816	NM_138370.2	PKDCC	NP_612379.2	ILMN_3234837	0003990494	S	2244	CCTCAGCATGAGCCAAGACTGGGGTCAGGGAGCAGGTGTGGTTTGAGCCA	2	+	42285411-42285460	2p21f	Homo sapiens protein kinase domain containing, cytoplasmic homolog (mouse) (PKDCC), mRNA.					
Homo sapiens	RefSeq	NR_001453.1	ILMN_6256	LOC85389	NR_001453.1	NR_001453.1		85389	32526877	NR_001453.1	LOC85389		ILMN_1754332	0003610753	S	96	GCTTGGCTAATGATGGCAACACCTTCCTTGGATGTCTGAGCGAGTGATAG	11	-	122435245-122435294	11q24.1b	Homo sapiens RNA, small nucleolar (LOC85389), non-coding RNA.					
Homo sapiens	RefSeq	NM_015947.2	ILMN_24821	ASCC1	NM_015947.2	NM_015947.2		51008	56676390	NM_015947.2	ASCC1	NP_057031.2	ILMN_1685097	0000830528	S	1896	GTGCGTACCACACTCTGTTCCTCCATCAGTGAACACTTGGCTTGCTTCCT	10	-	73856408-73856457	10q22.1e	Homo sapiens activating signal cointegrator 1 complex subunit 1 (ASCC1), mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]	RP11-150D20.4; CGI-18; ASC1p50	RP11-150D20.4; CGI-18; ASC1p50
Homo sapiens	Unigene	Hs.403584	ILMN_89681	HS.403584	Hs.403584		Hs.403584		25569934	CA749003			ILMN_1888615	0002370452	S	384	GGCTTGAGGTGATGGGGCTTGTAATCTGTACATTCTCTGGGTGCCTCCTG	3	-	72190340-72190389		UI-H-FE1-bei-a-08-0-UI.s2 NCI_CGAP_FE1 Homo sapiens cDNA clone UI-H-FE1-bei-a-08-0-UI 3, mRNA sequence					
Homo sapiens	RefSeq	XM_929903.1	ILMN_33134	LOC646939	XM_929903.1	XM_929903.1		646939	89040239	XM_929903.1	LOC646939	XP_934996.1	ILMN_1691701	0006280255	S	1221	GCAGGGAGCAGCCCAATCCCAAGAGGAACTTTGTCAACTTCAGGCAAAGC	16	+	25013300-25013349	16p12.1b	PREDICTED: Homo sapiens similar to thyroid hormone receptor interactor 11 (LOC646939), mRNA.					
Homo sapiens	RefSeq	XM_937208.1	ILMN_43763	KRTAP9-8	XM_937208.1	XM_937208.1		83901	89042686	XM_937208.1	KRTAP9-8	XP_942301.1	ILMN_1710314	0001260209	S	484	CTGCTGCCAGCCTTCTTGCTGCTGATCAAGTCCCAAGAGAACCACCATAC				17q21.2a	PREDICTED: Homo sapiens keratin associated protein 9-8 (KRTAP9-8), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]				
Homo sapiens	RefSeq	NM_194439.1	ILMN_25052	RNF212	NM_194439.1	NM_194439.1		285498	37059809	NM_194439.1	RNF212	NP_919420.1	ILMN_1787259	0002140192	S	1956	CCAAACTACCTTCCAAAGTGGCAGCAGCTTTTCGCATTCCCACTAGCAAC	4	-	1055595-1055644	4p16.3c	Homo sapiens ring finger protein 212 (RNF212), mRNA.			Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC120227; FLJ38841; MGC120228	FLJ38841; MGC120228; MGC120227
Homo sapiens	RefSeq	NM_012428.1	ILMN_175751	NPTN	NM_012428.2	NM_012428.2		27020	88758607	NM_012428.2	NPTN	NP_036560.1	ILMN_1753975	0000430561	I	587	CCCCTCCATAACATGGATTCGAGCCCAGGCCACCATAAGCGTCCTTCAGA	15	-	71671531-71671531:71676416-71676464	15q24.1a	Homo sapiens neuroplastin (NPTN), transcript variant beta, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISS]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]; A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48170] [evidence ISS]	Interacting selectively with a cell adhesion molecule [goid 50839] [evidence ISS]	SDFR1; GP55; DKFZp686L2477; np65; np55; GP65; SDR1; MGC102805	GP55; np65; np55; GP65; SDR1; MGC102805
Homo sapiens	RefSeq	NM_012428.1	ILMN_175751	NPTN	NM_012428.2	NM_012428.2		27020	88758607	NM_012428.2	NPTN	NP_036560.1	ILMN_1792997	0000430307	A	1992	GGGCTTAACCTGTGACTTTAATAAGCTGGAACAGTCCACTGAATGGGTAT	15	-	71639809-71639858	15q24.1a	Homo sapiens neuroplastin (NPTN), transcript variant beta, mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane [goid 42734] [evidence ISS]	The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence ISS]; A process that increases long-term neuronal synaptic plasticity, the ability of neuronal synapses to change long-term as circumstances require. Long-term neuronal synaptic plasticity generally involves increase or decrease in actual synapse numbers [goid 48170] [evidence ISS]	Interacting selectively with a cell adhesion molecule [goid 50839] [evidence ISS]	SDFR1; GP55; DKFZp686L2477; np65; np55; GP65; SDR1; MGC102805	GP55; np65; np55; GP65; SDR1; MGC102805
Homo sapiens	RefSeq	NM_175870.3	ILMN_10080	LOC90925	NM_175870.3	NM_175870.3		90925	39725709	NM_175870.3	LOC90925	NP_787066.1	ILMN_1794927	0004670113	S	712	TTGCTTGCCTTCCTCCCTTCTGTCCGCTCTTACTCCCTCCTTCTTTTATT					Homo sapiens hypothetical protein LOC90925 (LOC90925), mRNA.					
Homo sapiens	RefSeq	NM_002565.3	ILMN_6168	P2RY4	NM_002565.3	NM_002565.3		5030	66932905	NM_002565.3	P2RY4	NP_002556.1	ILMN_1721630	0005890164	S	1098	CTTGCTCACTGGGGACAAATATCGACGTCAGCTCCGTCAGCTCTGTGGTG	X	-	69478507-69478556	Xq13.1b	Homo sapiens pyrimidinergic receptor P2Y, G-protein coupled, 4 (P2RY4), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8537336] [evidence TAS]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand, followed by the activation of phospholipase C and the subsequent release of inositol trisphosphate [goid 7200] [pmid 8537336] [evidence TAS]; Any process that increases the concentration of calcium ions in the cytosol [goid 7204] [pmid 8537335] [evidence TAS]; The directed movement of chloride ions across an epithelium [goid 30321] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 45030] [evidence IEA]	UNR; NRU; P2P; P2Y4	UNR; NRU; P2P; P2Y4
Homo sapiens	RefSeq	NM_153615.1	ILMN_28738	RGL4	NM_153615.1	NM_153615.1		266747	23957679	NM_153615.1	RGL4	NP_705843.1	ILMN_1663422	0007000465	S	2648	GCTCTGCACCATCCCTCACCCAGACCGTAGACACCAGGGAACCACATCTA	22	+	22371126-22371175	22q11.23a	Homo sapiens ral guanine nucleotide dissociation stimulator-like 4 (RGL4), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A vesicle formed of membrane or protein, found in the cytoplasm of a cell [goid 31410] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]	Rgr; MGC119678; MGC119680	Rgr; MGC119678; MGC119680
Homo sapiens	RefSeq	XM_927904.1	ILMN_46037	LOC644808	XM_927904.1	XM_927904.1		644808	88942678	XM_927904.1	LOC644808	XP_932997.1	ILMN_1652527	0006110750	S	147	TGGGCCTTGTGCTTTGGAGCTATCAGATTTGCATGTTAGAGAAATGACTC	1	-	45082453-45082502		PREDICTED: Homo sapiens similar to 40S ribosomal protein S2 (LOC644808), mRNA.					
Homo sapiens	RefSeq	XM_001716757.1	ILMN_346116	LOC100133063	XM_001716757.1	XM_001716757.1		100133063	169208442	XM_001716757.1	LOC100133063	XP_001716809.1	ILMN_3244560	0004060315	S	953	AGCTCCTGGGGACAGGGCCGTCTTCCCCCAGCTGTGTAGCTCAGGAAGAA	15	-	19544701-19544736:19544843-19544856	15q11.2b	PREDICTED: Homo sapiens similar to breast cancer anti-estrogen resistance 1 (LOC100133063), mRNA.					
Homo sapiens	RefSeq	NM_003709.1	ILMN_28544	KLF7	NM_003709.2	NM_003709.2		8609	142345029	NM_003709.2	KLF7	NP_003700.1	ILMN_1662023	0003290142	S	1273	TAAAGGAAACGCCATGAGGCAGGGGGCTGGACTTCAGGCGGGGACCCATT	2	-	207945845-207945894	2q33.3c	Homo sapiens Kruppel-like factor 7 (ubiquitous) (KLF7), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter [goid 6357] [pmid 9774444] [evidence TAS]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription [goid 45893] [evidence IEA]; The process by which the anatomical structures of dendrite are generated and organized. Morphogenesis pertains to the creation of form. A dendrite is a freely branching protoplasmic process of a nerve cell [goid 48813] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 9774444] [evidence TAS]; The function of a transcription cofactor that activates transcription from a RNA polymerase II promoter; does not bind DNA itself [goid 3713] [pmid 9774444] [evidence TAS]; Interacting selectively with zinc (Zn) ions [goid 8270] [pmid 9774444] [evidence TAS]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	UKLF	UKLF
Homo sapiens	RefSeq	NM_020662.1	ILMN_17064	MRS2	NM_020662.2	NM_020662.2		57380	93204868	NM_020662.2	MRS2	NP_065713.1	ILMN_1778677	0006480440	S	1402	GCCTCAGACTGGATGGACTTGGATCAGGAAGGAGCATCCTAACAAACCGT	6	+	24423870-24423919	6p22.2b	Homo sapiens MRS2 magnesium homeostasis factor homolog (S. cerevisiae) (MRS2), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells [goid 30001] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the transfer of metal ions from one side of a membrane to the other [goid 46873] [evidence IEA]	MGC78523; HPT; MRS2; MRS2L	MGC78523; HPT; MRS2
Homo sapiens	RefSeq	NM_000123.2	ILMN_13388	ERCC5	NM_000123.2	NM_000123.2		2073	51988899	NM_000123.2	ERCC5	NP_000114.2	ILMN_1795495	0005820343	S	3829	CGCAGAACTCAGTGAAGGAAGCTCCCGTGAAGAATGGAGGTGCGACCACC	13	+	102326079-102326128	13q33.1b	Homo sapiens excision repair cross-complementing rodent repair deficiency, complementation group 5 (ERCC5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8710877] [evidence IDA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 11313499] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 10214908] [evidence EXP]; A complex that contains kinase activity directed towards the C-terminal Domain (CTD) of the largest subunit of RNA polymerase II and is essential for initiation at RNA polymerase II promoters in vitro. In S. cerevisiae, it is composed of the 5-subunit core (Rad3p, Tfb1p, Tfb2p, Ssl1p and Tfb4p), Ssl2p, and TFIIK (Kin28p, Ccl1p, and Tfb3p). All of the subunits have equivalents in humans: the 5 subunit core is composed of XPD, p62, p55, p44, p34; the equivalent of the TFIIK subcomplex is composed of MO15, Mat1, and a cyclin; the human equivalent of Ssl2p is XPB [goid 5675] [pmid 11259578] [evidence IDA]	In nucleotide excision repair a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts) [goid 6289] [evidence IEA]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage [goid 718] [pmid 10583946] [evidence EXP]; The preferential repair of DNA lesions on the actively transcribed strand of the DNA duplex. In addition, the transcription-coupled nucleotide-excision repair pathway is required for the recognition and repair of a small subset of lesions that are not recognized by the general nucleotide excision repair pathway [goid 6283] [pmid 16246722] [evidence IMP]; The endonucleolytic cleavage of the damaged strand of DNA 3' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision precedes the incision formed 5' to the site of damage [goid 6295] [pmid 7657672] [evidence IMP]; The endonucleolytic cleavage of the damaged strand of DNA 3' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision precedes the incision formed 5' to the site of damage [goid 6295] [pmid 8090225] [evidence IDA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]; The control of viability and duration in the adult phase of the life-cycle [goid 8340] [evidence IEA]; Any process by which an organism or cell protects itself from ultraviolet radiation (UV), which may also result in resistance to repeated exposure to UV [goid 9650] [pmid 7510366] [evidence IGI]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 290 nm [goid 10225] [pmid 17208056] [evidence IMP]; The increase in size or mass of an entire multicellular organism, as opposed to cell growth [goid 35264] [evidence IEA]; Any process that stops, prevents or reduces the frequency, rate or extent of cell death by apoptosis [goid 43066] [pmid 16167068] [evidence IMP]	Interacting selectively with single-stranded DNA [goid 3697] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks [goid 4519] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids [goid 4518] [evidence IEA]; Interacting selective with DNA that contains a bubble. A bubble occurs when DNA contains a region of unpaired, single-stranded DNA flanked on both sides by regions of paired, double-stranded DNA [goid 405] [pmid 16246722] [evidence IDA]; Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 8090225] [evidence IDA]; Interacting selectively with double-stranded DNA [goid 3690] [pmid 12644470] [evidence IDA]; Interacting selectively with single-stranded DNA [goid 3697] [pmid 12644470] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks [goid 4520] [pmid 12644470] [evidence IDA]; Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks [goid 4520] [pmid 8090225] [evidence IDA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10026181] [evidence IPI]; Interacting selectively with a protein N-terminus, the end of any peptide chain at which the 2-amino (or 2-imino) function of a constituent amino acid is not attached in peptide linkage to another amino-acid residue [goid 47485] [pmid 8652557] [evidence IPI]	XPG; ERCM2; UVDR; XPGC; COFS3	XPG; ERCM2; UVDR; XPGC; COFS3
Homo sapiens	RefSeq	NM_001018068.1	ILMN_26802	SERBP1	NM_001018069.1	NM_001018069.1		26135	66346682	NM_001018069.1	SERBP1	NP_001018079.1	ILMN_1773968	0004210754	A	6145	GTTCCTTTTGCTGCCCATTTGGGAGTATGTGGCAATTCCTAGTGCTCTTG	1	-	67874017-67874066	1p31.3a	Homo sapiens SERPINE1 mRNA binding protein 1 (SERBP1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process that modulates the propensity of mRNA molecules to degradation. Includes processes that both stabilize and destabilize mRNAs [goid 43488] [pmid 11001948] [evidence NAS]	Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Interacting selectively with the 3' untranslated region of an mRNA molecule [goid 3730] [pmid 11001948] [evidence IDA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12505151] [evidence IPI]	CGI-55; FLJ90489; DKFZp564M2423; CHD3IP; PAIRBP1; PAI-RBP1; HABP4L	CGI-55; FLJ90489; DKFZp564M2423; CHD3IP; PAIRBP1; PAI-RBP1; HABP4L
Homo sapiens	RefSeq	NM_006408.2	ILMN_15860	AGR2	NM_006408.2	NM_006408.2		10551	20070225	NM_006408.2	AGR2	NP_006399.1	ILMN_1814151	0003140463	S	1437	GGGTTTAGGAAACGTGAAAGGCTGTGGCATCAGGGTAGGGGAGCATTCTG	7	-	16798155-16798204	7p21.1b	Homo sapiens anterior gradient homolog 2 (Xenopus laevis) (AGR2), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]			GOB-4; HAG-2; XAG-2; AG2	GOB-4; HAG-2; XAG-2; AG2
Homo sapiens	RefSeq	NM_153210.2	ILMN_174779	USP43	NM_153210.2	NM_153210.2		124739	123703801	NM_153210.2	USP43	NP_694942.2	ILMN_2093188	0001820241	S	3017	AGAAGGAGAACAGGAGGAATGAGAGGGCAGAGGTCTCTCCACAGGTGCCC				17p13.1b	Homo sapiens ubiquitin specific peptidase 43 (USP43), mRNA.		The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Catalysis of the reaction: ubiquitin C-terminal thiolester + H2O = ubiquitin + a thiol. Hydrolysis of esters, including those formed between thiols such as dithiothreitol or glutathione and the C-terminal glycine residue of the polypeptide ubiquitin, and AMP-ubiquitin [goid 4221] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]; Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile [goid 8234] [evidence IEA]	FLJ30626	FLJ30626
Homo sapiens	Unigene	Hs.564574	ILMN_117216	HS.564574	Hs.564574		Hs.564574		3109063	AA947810			ILMN_1912808	0001260608	S	169	AAACTTACAAGTCTTCAAAAACAGTTCTAACAGGGAAGCTTATAGCAATA					od87f06.s1 NCI_CGAP_Ov2 Homo sapiens cDNA clone IMAGE:1374947 similar to contains element L1 repetitive element ;, mRNA sequence					
Homo sapiens	RefSeq	NM_005172.1	ILMN_19379	ATOH1	NM_005172.1	NM_005172.1		474	4885074	NM_005172.1	ATOH1	NP_005163.1	ILMN_1740671	0006660129	S	957	CTTGCAGCCAGTGCAGGAGGAAAACAGCAAAACTTCGCCTCGGTCCCACA	4	+	94751034-94751083	4q22.2b	Homo sapiens atonal homolog 1 (Drosophila) (ATOH1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The characteristic movement of immature neurons from germinal zones to specific positions where they will reside as they mature [goid 1764] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; The process by which the migration of an axon growth cone is directed to a specific target site in response to a combination of attractive and repulsive cues [goid 7411] [evidence IEA]; The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.) [goid 7420] [evidence IEA]; The process by which the anatomical structures of the inner ear are generated and organized. Morphogenesis pertains to the creation of form. The inner ear is the structure in vertebrates that contains the organs of balance and hearing. It consists of soft hollow sensory structures (the membranous labyrinth) containing fluid (endolymph) surrounded by fluid (perilymph) and encased in a bony cavity (the bony labyrinth). It consists of two chambers, the sacculus and utriculus, from which arise the cochlea and semicircular canals respectively [goid 42472] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into an auditory hair cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed [goid 42667] [evidence IEA]; Process by which a cell becomes capable of differentiating autonomously into an auditory hair cell regardless of its environment; upon determination, the cell fate cannot be reversed [goid 42668] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of auditory hair cell differentiation [goid 45609] [evidence IEA]; Any process that modulates the frequency, rate or extent of neuron differentiation [goid 45664] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of transcription from the RNA polymerase II promoter [goid 45944] [evidence IEA]	The function of binding to a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex [goid 3700] [pmid 8872459] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with DNA that is assembled into chromatin [goid 31490] [evidence IEA]	MATH-1; ATH1; HATH1	MATH-1; ATH1; HATH1
Homo sapiens	RefSeq	NM_004967.2	ILMN_11684	IBSP	NM_004967.2	NM_004967.2		3381	13259536	NM_004967.2	IBSP	NP_004958.1	ILMN_1719194	0006110142	S	988	CGGGGAACCTCGTGGGGACAATTACCGAGCCTATGAAGATGAGTACAGCT	4	+	88951981-88952030	4q22.1a	Homo sapiens integrin-binding sialoprotein (bone sialoprotein, bone sialoprotein II) (IBSP), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance [goid 1503] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	BNSP; BSP-II; BSP; SP-II	BNSP; BSP-II; BSP; SP-II
Homo sapiens	RefSeq	XM_940254.1	ILMN_37244	LOC651123	XM_940254.1	XM_940254.1		651123	89066516	XM_940254.1	LOC651123	XP_945347.1	ILMN_1795720	0004220762	S	38	ACTCTAGCCTTGCCAAAGTGCTGGCATGGGGCAGTAACAGGAGGCCCAAC					PREDICTED: Homo sapiens similar to ATP-binding cassette sub-family D member 1 (Adrenoleukodystrophy protein) (ALDP) (LOC651123), mRNA.					
Homo sapiens	RefSeq	NM_020480.2	ILMN_802	ANK1	NM_020478.3	NM_020478.3		286	148470407	NM_020478.3	ANK1	NP_065211.2	ILMN_1684694	0003180209	A	3318	TGCTAGTAGGAGCCGTTAGGGGAGGAGTTTGGGGTCTCCACACGATGCCT	8	-	41630109-41630158	8p11.21b	Homo sapiens ankyrin 1, erythrocytic (ANK1), transcript variant 5, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [pmid 1833445] [evidence NAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9430667] [evidence NAS]; The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis [goid 16323] [pmid 12409278] [evidence NAS]; A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle fiber; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage [goid 16529] [evidence IEA]	A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells [goid 6887] [pmid 1833445] [evidence NAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 9430667] [evidence NAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The maintenance of the apicobasal polarity of an epithelial cell [goid 45199] [pmid 11427698] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 8640229] [evidence TAS]; The binding activity of a molecule that brings together a cytoskeletal molecule and one or more other molecules, permitting them to function in a coordinated way [goid 8093] [pmid 11427698] [evidence TAS]; Interacting selectively with any enzyme [goid 19899] [pmid 11427698] [evidence TAS]; Interacting selectively with spectrin, a protein that is the major constituent of the erythrocyte cytoskeletal network. It associates with band 4.1 (see band protein) and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. It is composed of nonhomologous chains, alpha and beta, which aggregate side-to-side in an antiparallel fashion to form dimers, tetramers, and higher polymers [goid 30507] [pmid 8640229] [evidence NAS]	SPH2; ANK; SPH1	SPH2; ANK; SPH1
Homo sapiens	RefSeq	NM_033493.1	ILMN_20802	CDC2L1	NM_033492.1	NM_033492.1		984	16332369	NM_033492.1	CDC2L1	NP_277027.1	ILMN_1765704	0004250739	A	1761	GTCCAACCTGCTGCTGAGCCACGCCGGCATCCTCAAGGTGGGTGACTTCG	1	-	1625427-1625445:1625522-1625552	1p36.33a	Homo sapiens cell division cycle 2-like 1 (PITSLRE proteins) (CDC2L1), transcript variant 8, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 8195233] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 8195233] [evidence TAS]	Any process that modulates the frequency, rate or extent of cell growth [goid 1558] [pmid 10882096] [evidence IEP]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [pmid 9750192] [evidence NAS]; The process of introducing a phosphate group on to a protein [goid 6468] [pmid 12501247] [evidence IDA]; A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [pmid 9750192] [evidence NAS]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; Progression through mitosis, the division of the eukaryotic cell nucleus to produce two daughter nuclei that, usually, contain the identical chromosome complement to their mother [goid 7067] [pmid 1639388] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [pmid 8195233] [evidence TAS]; Any process that modulates the frequency, rate or extent of mRNA processing, those processes involved in the conversion of a primary mRNA transcript into a mature mRNA prior to its translation into polypeptide [goid 50684] [pmid 12501247] [evidence IDA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12624090] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [pmid 12501247] [evidence IDA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	p58CDC2L1; CDK11-p46; CLK-1; CDK11-p110; PK58; CDK11-p58; p58CLK-1; p58	p58CDC2L1; CDK11-p46; CLK-1; CDK11-p110; PK58; CDK11-p58; p58CLK-1; p58
Homo sapiens	RefSeq	XR_017562.2	ILMN_176454	LOC643445	XR_017562.2	XR_017562.2		643445	169163300	XR_017562.2	LOC643445		ILMN_3282184	0007100341	M	1252	TGTGTCTGAAGGTGGATAATCATTTCAGTCTCTTGACCACCTCCCCAGAG	2	-	97055606-97055655	2q11.2b	PREDICTED: Homo sapiens misc_RNA (LOC643445), miscRNA.					
Homo sapiens	RefSeq	NM_003332.2	ILMN_27109	TYROBP	NM_003332.2	NM_003332.2		7305	38157998	NM_003332.2	TYROBP	NP_003323.1	ILMN_1778977	0002370358	A	198	ATGGGAGACCTGGTGCTGACAGTGCTCATTGCCCTGGCCGTGTACTTCCT	19	-	41090225-41090274	19q13.12a	Homo sapiens TYRO protein tyrosine kinase binding protein (TYROBP), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9490415] [evidence TAS]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	A defense response that is mediated by cells [goid 6968] [pmid 9490415] [evidence TAS]; A series of reactions within the cell that occur as a result of a single trigger reaction or compound [goid 7242] [pmid 9490415] [evidence TAS]	 [goid 5057] [pmid 9490415] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	DAP12; KARAP; PLOSL	DAP12; KARAP; PLOSL
Homo sapiens	RefSeq	NM_138396.4	ILMN_16648	MARCH9	NM_138396.4	NM_138396.4		92979	53759067	NM_138396.4	MARCH9	NP_612405.2	ILMN_1748393	0004890131	S	2121	TGCTAGGTGGCAGCACTCCGAGGTATCTAAAGGGTAGACCTGGACCTGCC	12	+	56439615-56439664	12q14.1a	Homo sapiens membrane-associated ring finger (C3HC4) 9 (MARCH9), mRNA.	The lipid bilayer surrounding any of the compartments of the Golgi apparatus [goid 139] [evidence IEA]; The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm [goid 5765] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein [goid 6511] [evidence IEA]	Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6 [goid 16874] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	RNF179; FLJ36578; MARCH-IX	RNF179; FLJ36578; MARCH-IX
Homo sapiens	RefSeq	NM_001927.3	ILMN_17948	DES	NM_001927.3	NM_001927.3		1674	55749931	NM_001927.3	DES	NP_001918.3	ILMN_1698995	0000010296	S	1790	CCCTGTCCCTCCCACCTCTGTGACCTCAGGCACTAGCCTTTGGCTCTGGA	2	+	219999247-219999296	2q35f	Homo sapiens desmin (DES), mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that is not soluble in water [goid 5626] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles [goid 5856] [evidence IEA]; A cytoskeletal structure that forms a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space. Intermediate filaments may be divided into five chemically distinct classes: Type I, acidic keratins; Type II, basic keratins; Type III, including desmin, vimentin and others; Type IV, neurofilaments and related filaments; and Type V, lamins [goid 5882] [pmid 9736733] [evidence TAS]; Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached [goid 30018] [pmid 9415431] [evidence IDA]; The outer membrane of a muscle fiber, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers [goid 42383] [evidence IEA]; Fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle [goid 43292] [evidence IEA]; The junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell; the site of interneuronal communication. As the nerve fiber approaches the synapse it enlarges into a specialized structure, the presynaptic nerve ending, which contains mitochondria and synaptic vesicles. At the tip of the nerve ending is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic nerve ending secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane [goid 45202] [evidence IEA]	A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 9697706] [evidence TAS]; A process that is carried out at the cellular level which results in the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures [goid 7010] [pmid 9736733] [evidence TAS]; Any process that modulates the frequency, rate or extent of heart contraction. Heart contraction is the process by which the heart decreases in volume in a characteristic way to propel blood through the body [goid 8016] [pmid 9697706] [evidence TAS]	The action of a molecule that contributes to the structural integrity of a cytoskeletal structure [goid 5200] [pmid 9736733] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CSM2; FLJ41013; FLJ39719; CSM1; FLJ41793; FLJ12025; CMD1I	CSM2; FLJ41013; FLJ39719; CSM1; FLJ41793; FLJ12025; CMD1I
Homo sapiens	RefSeq	NM_199478.1	ILMN_20259	PLP1	NM_199478.1	NM_199478.1		5354	41349500	NM_199478.1	PLP1	NP_955772.1	ILMN_2414135	0004780139	A	1497	AGCACTGACCCCGATGGCGATGGACTACTGAAGCCCTAACTCAGCCAACC	X	+	102932780-102932829	Xq22.2a	Homo sapiens proteolipid protein 1 (PLP1), transcript variant 2, mRNA.	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]	The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 2479017] [evidence TAS]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [pmid 2479017] [evidence TAS]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 2479017] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PLP/DM20; PMD; SPG2; MMPL; PLP	PLP/DM20; PMD; SPG2; MMPL; PLP
Homo sapiens	RefSeq	NM_000533.3	ILMN_20259	PLP1	NM_199478.1	NM_199478.1		5354	41349500	NM_199478.1	PLP1	NP_955772.1	ILMN_1790106	0002650288	A	2579	CAAACCAGTATACAAGATAAGCTTCCAGGCTGCATAGAAGGAGGAGAGGG	X	+	102933862-102933911	Xq22.2a	Homo sapiens proteolipid protein 1 (PLP1), transcript variant 2, mRNA.	An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; An electrically insulating fatty layer that surrounds the axons of many neurons. It is an outgrowth of glial cells: Schwann cells supply the myelin for peripheral neurons while oligodendrocytes supply it to those of the central nervous system [goid 43209] [evidence IEA]	The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]; The process of communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse [goid 7268] [pmid 2479017] [evidence TAS]; Any process by which the axon of a neuron is insulated, and that insulation maintained, thereby preventing dispersion of the electrical signal [goid 8366] [pmid 2479017] [evidence TAS]; The process whereby neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of oligodendrocytes in the central nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier [goid 22010] [evidence IEA]; The chemical reactions and pathways resulting in the formation of long-chain fatty acids, aliphatic compounds having a terminal carboxyl group and with a chain length of C12-18 [goid 42759] [evidence IEA]; A developmental process, independent of morphogenetic (shape) change, that is required for a cell to attain its fully functional state [goid 48469] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell [goid 5198] [pmid 2479017] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PLP/DM20; PMD; SPG2; MMPL; PLP	PLP/DM20; PMD; SPG2; MMPL; PLP
Homo sapiens	RefSeq	XM_001717737.1	ILMN_349064	LOC100128081	XM_001717737.1	XM_001717737.1		100128081	169172213	XM_001717737.1	LOC100128081	XP_001717789.1	ILMN_3192813	0005810360	A	210	CAGAGATGGAGTTTTGCCATTTGCCCAGGCTGGACTCGCAGTCCTGGACT				7p15.1d	PREDICTED: Homo sapiens similar to hCG2033532 (LOC100128081), mRNA.					
Homo sapiens	RefSeq	NM_001008696.1	ILMN_5282	THAP7	NM_001008696.1	NM_001008696.1		80764	56788352	NM_001008696.1	THAP7	NP_001008696.1	ILMN_1750203	0000460435	I	138	CCAGATGACGCTGAGGAAACTGCTTTTCTTCTCGAGGCCTCCGTTGCCTC	22	-	19685852-19685901	22q11.21e	Homo sapiens THAP domain containing 7 (THAP7), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information [goid 5694] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [pmid 18029348] [evidence IDA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with DNA (deoxyribonucleic acid) [goid 3677] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	MGC10963	MGC10963
Homo sapiens	RefSeq	XM_942206.1	ILMN_40708	LOC649979	XM_942206.1	XM_942206.1		649979	89040921	XM_942206.1	LOC649979	XP_947299.1	ILMN_1756472	0007200551	S	175	CTTCCACGGTTTTCTGAAGCGTCATTTGGCCAGTGGATGCGGCACAGGGC					PREDICTED: Homo sapiens hypothetical protein LOC649979 (LOC649979), mRNA.					
Homo sapiens	RefSeq	NM_000298.4	ILMN_166011	PKLR	NM_000298.4	NM_000298.4		5313	82659098	NM_000298.4	PKLR	NP_000289.1	ILMN_2380561	0003460463	A	2433	CCCACTCATGTTGTTCCCACACACAAACCAAGAGCCAAAAATGAGTGTGT	1	-	153526254-153526303	1q22a	Homo sapiens pyruvate kinase, liver and RBC (PKLR), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 3126495] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	PKL; PK1; RPK	PKL; PK1; RPK
Homo sapiens	RefSeq	NM_000298.4	ILMN_166011	PKLR	NM_000298.4	NM_000298.4		5313	82659098	NM_000298.4	PKLR	NP_000289.1	ILMN_2279397	0006330451	I	4	GCCCCAGGCCCACACTGAAAGCATGTCGATCCAGGAGAACATATCATCCC	1	-	153537782-153537810:153537811-153537831	1q22a	Homo sapiens pyruvate kinase, liver and RBC (PKLR), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.		The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle [goid 6096] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism [goid 51707] [evidence IEA]	Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]; Interacting selectively with magnesium (Mg) ions [goid 287] [evidence IEA]; Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate [goid 4743] [pmid 3126495] [evidence TAS]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	PKL; PK1; RPK	PKL; PK1; RPK
Homo sapiens	RefSeq	NM_022843.2	ILMN_4787	PCDH20	NM_022843.2	NM_022843.2		64881	21536447	NM_022843.2	PCDH20	NP_073754.1	ILMN_1703572	0005900376	S	3813	GTGAATTCTTCTAGAGGCTTGTGTACACTACTGGTTGTTTTAGTTGGGCC	13	-	60882360-60882409	13q21.31a	Homo sapiens protocadherin 20 (PCDH20), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [evidence IEA]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PCDH13; FLJ22218	PCDH13; FLJ22218
Homo sapiens	RefSeq	NM_031458.1	ILMN_12926	PARP9	NM_031458.1	NM_031458.1		83666	13899296	NM_031458.1	PARP9	NP_113646.1	ILMN_1731224	0005700735	S	2741	CCTTTGCACAGCATCCTTGGAGGGGATTCGCAAGTGGCAGCCCTGTTGAT	3	-	123729903-123729952	3q21.1a	Homo sapiens poly (ADP-ribose) polymerase family, member 9 (PARP9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11110709] [evidence TAS]	The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 11110709] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 11110709] [evidence ND ]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp666B0810; DKFZp686M15238; BAL1; FLJ26637; BAL; FLJ41418; MGC:7868	DKFZp666B0810; DKFZp686M15238; BAL1; FLJ26637; BAL; FLJ41418; MGC:7868
Homo sapiens	RefSeq	NM_031458.1	ILMN_12926	PARP9	NM_031458.1	NM_031458.1		83666	13899296	NM_031458.1	PARP9	NP_113646.1	ILMN_2053527	0003140707	S	2973	CTTGGGGTTGGGGTAGGTAGATACCAAATGAAACACTTTCAGGACCTTCC	3	-	123729671-123729720	3q21.1a	Homo sapiens poly (ADP-ribose) polymerase family, member 9 (PARP9), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 11110709] [evidence TAS]	The orderly movement of cells from one site to another, often during the development of a multicellular organism [goid 16477] [pmid 11110709] [evidence TAS]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [pmid 11110709] [evidence ND ]; Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor [goid 3950] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	DKFZp666B0810; DKFZp686M15238; BAL1; FLJ26637; BAL; FLJ41418; MGC:7868	DKFZp666B0810; DKFZp686M15238; BAL1; FLJ26637; BAL; FLJ41418; MGC:7868
Homo sapiens	Unigene	Hs.545680	ILMN_108828	HS.545680	Hs.545680		Hs.545680		6838104	AW341478			ILMN_1818620	0006370021	S	471	CAGTGTCTGCTGAGCAAAAGGAGGAAAAGGCTGAAAAATGGGACTCACAC	9	+	98222291-98222340		hd10c01.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2909088 3, mRNA sequence					
Homo sapiens	RefSeq	NM_000370.2	ILMN_911	TTPA	NM_000370.2	NM_000370.2		7274	50592999	NM_000370.2	TTPA	NP_000361.1	ILMN_2160750	0001690133	S	842	CAGCAGCATTTCTGAGAGCATTCAATGAGAAGTTATGTCATGTGAATGGC	8	-	64136342-64136364:64136365-64136391	8q12.3b	Homo sapiens tocopherol (alpha) transfer protein (TTPA), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7887897] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7887897] [evidence TAS]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IEA]; The chemical reactions and pathways involving vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant [goid 42360] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant [goid 8431] [pmid 7887897] [evidence TAS]	ATTP; TTP1; AVED; alphaTTP	alphaTTP; ATTP; TTP1; AVED
Homo sapiens	RefSeq	NM_000370.2	ILMN_911	TTPA	NM_000370.2	NM_000370.2		7274	50592999	NM_000370.2	TTPA	NP_000361.1	ILMN_1741862	0003060204	S	238	TACTAAAAAACTATTATAAGTGGAGAGCAGAATGTCCAGAAATAAGTGCA	8	-	64148150-64148199	8q12.3b	Homo sapiens tocopherol (alpha) transfer protein (TTPA), mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7887897] [evidence TAS]; The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 7887897] [evidence TAS]; Attachment of the blastocyst to the uterine lining [goid 7566] [evidence IEA]; The chemical reactions and pathways involving vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant [goid 42360] [evidence IEA]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Interacting selectively with vitamin E, tocopherol, which includes a series of eight structurally similar compounds. Alpha-tocopherol is the most active form in humans and is a powerful biological antioxidant [goid 8431] [pmid 7887897] [evidence TAS]	ATTP; TTP1; AVED; alphaTTP	alphaTTP; ATTP; TTP1; AVED
Homo sapiens	RefSeq	NM_001013712.1	ILMN_19833	LOC440925	NM_001013712.1	NM_001013712.1		440925	61966870	NM_001013712.1	LOC440925	NP_001013734.1	ILMN_1663081	0001660133	S	1903	CTCTCTTGAGTGGTCGCAGTTGGCTGCTCTCGGCCTCATCTCCGTTTGTG	2	-	171277371-171277420	2q31.1b	Homo sapiens hypothetical gene supported by AK123485 (LOC440925), mRNA.					
Homo sapiens	RefSeq	NM_144663.1	ILMN_8589	C11ORF40	NM_144663.1	NM_144663.1		143501	21389542	NM_144663.1	C11orf40	NP_653264.1	ILMN_1673982	0000110477	S	332	CCAGTGGAATCTCTATTTCCTGGATCTCAGCCCCTCTACCTGTGGGAGCA	11	-	4593451-4593500	11p15.4d	Homo sapiens chromosome 11 open reading frame 40 (C11orf40), mRNA.				NOV1	NOV1
Homo sapiens	RefSeq	NR_024072.1	ILMN_364350	MRS2P2	NR_024072.1	NR_024072.1		729633	195976812	NR_024072.1	MRS2P2		ILMN_3238254	0002030373	S	2139	CCCATAGGAAGCCATAGTTCTTTGTTACCACAGGGAATTACGTCCAAGTG				12q21.1a	Homo sapiens MRS2 magnesium homeostasis factor homolog (S. cerevisiae) pseudogene 2 (MRS2P2), non-coding RNA.					
Homo sapiens	RefSeq	XR_038695.1	ILMN_339688	LOC731542	XR_038695.1	XR_038695.1		731542	169217657	XR_038695.1	LOC731542		ILMN_3300051	0007510372	M	462	CAGAAGACCTCTTATGCTCAGCACAAACAGTCCCCCAAATCCAGAAGAAG					PREDICTED: Homo sapiens misc_RNA (LOC731542), miscRNA.					
Homo sapiens	RefSeq	NR_030588.1	ILMN_388065	MIR874	NR_030588.1	NR_030588.1		100126343	262206007	NR_030588.1	MIR874		ILMN_3310431	0001240689	S	20	ACCAGGGTAAGAGAGACTCTCGCTTCCTGCCCTGGCCCGAGGGACCGACT				5q31.2b	Homo sapiens microRNA 874 (MIR874), microRNA.					
Homo sapiens	RefSeq	XM_001714271.1	ILMN_336960	LOC728317	XM_001714271.1	XM_001714271.1		728317	169217314	XM_001714271.1	LOC728317	XP_001714323.1	ILMN_3222076	0002970386	A	1596	ATGGACGCGCAGGGCCATTGCCCCTACTCCAGGCACTCTGAGCAGTTACA				Xq28f	PREDICTED: Homo sapiens hypothetical LOC728317 (LOC728317), mRNA.					
Homo sapiens	RefSeq	XM_927788.1	ILMN_39051	LOC644689	XM_927788.1	XM_927788.1		644689	89029587	XM_927788.1	LOC644689	XP_932881.1	ILMN_1651737	0002760097	S	441	GAGGAGACACCTAGAGCCTGCAACACCACGGCTCACCTCGCTGCAGATTT	9	+	69382805-69382850:69427166-69427169		PREDICTED: Homo sapiens similar to N-acetylated-alpha-linked acidic dipeptidase II (NAALADase II) (LOC644689), mRNA.					
Homo sapiens	RefSeq	NM_004357.3	ILMN_44771	CD151	NM_139029.1	NM_139029.1		977	87159821	NM_139029.1	CD151	NP_620598.1	ILMN_1661589	0001940132	I	75	AGAGTCCTGGGGAGCTTCTGTCCACCTGTCCTGCAGAGGAGTCGTTTCCA	11	+	824533-824582	11p15.5c	Homo sapiens CD151 molecule (Raph blood group) (CD151), transcript variant 4, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [pmid 8627808] [evidence TAS]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9602068] [evidence NAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 8627808] [evidence TAS]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9602068] [evidence NAS]; The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image [goid 7601] [evidence IEA]; The series of events required for an organism to receive an auditory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Sonic stimuli are detected in the form of vibrations and are processed to form a sound [goid 7605] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14676841] [evidence IPI]	TSPAN24; MER2; GP27; SFA1; PETA-3; RAPH	TSPAN24; GP27; SFA1; PETA-3
Homo sapiens	RefSeq	NM_004488.1	ILMN_28512	GP5	NM_004488.1	NM_004488.1		2814	4758459	NM_004488.1	GP5	NP_004479.1	ILMN_1780622	0000130452	S	3732	ACCAGGTGGATGTGGAGCAGGAGAGCTGGATCGTGGCATTTGTTTCTGGG	3	-	195596789-195596838	3q29c	Homo sapiens glycoprotein V (platelet) (GP5), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8608228] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 1939645] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 10429193] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 7690959] [evidence TAS]; The lipid bilayer surrounding the platelet alpha granule [goid 31092] [pmid 8608228] [evidence EXP]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 7690959] [evidence NAS]; The sequential process by which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers [goid 7596] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	CD42d	CD42d
Homo sapiens	RefSeq	XM_931244.1	ILMN_44635	LOC643018	XM_931244.1	XM_931244.1		643018	89057870	XM_931244.1	LOC643018	XP_936337.1	ILMN_1697292	0000780692	S	133	AGGGAGCAGCCGACGGGCACCCCCGAACGCTGGGGCACGGAATTTCAACG	20	-	38752476-38752525		PREDICTED: Homo sapiens hypothetical protein LOC643018 (LOC643018), mRNA.					
Homo sapiens	RefSeq	XM_933066.1	ILMN_173647	LOC647042	XM_294765.7	XM_294765.7		647042	113425351	XM_294765.7	LOC647042	XP_294765.6	ILMN_1776250	0003290671	A	505	GAGCTTGTTCAAACTCAAAAACCAGACGGCTGAACCCCTGGCCCCAGAGC	15	-	80424686-80424707:80425095-80425122	15q25.2a	PREDICTED: Homo sapiens similar to golgi autoantigen, golgin subfamily a-like (LOC647042), mRNA.					
Homo sapiens	Unigene	Hs.584357	ILMN_136538	HS.584357	Hs.584357		Hs.584357		83062104	DB027523			ILMN_1915586	0004480156	S	271	GGTCAGAACAGAGCAGGAGCTGCGGGAGATCAAGGTGCCCACTGTTTCCA	9	+	137196385-137196434		DB027523 TESTI2 Homo sapiens cDNA clone TESTI2010045 5, mRNA sequence					
Homo sapiens	RefSeq	NM_138376.1	ILMN_2965	TTC5	NM_138376.1	NM_138376.1		91875	24308431	NM_138376.1	TTC5	NP_612385.1	ILMN_1706455	0003440201	S	1516	CTCTCTCCTCTGTCCTCATCATGTTCCAGCTCTCTACAGGGCCACATACT	14	-	19827423-19827472	14q11.2b	Homo sapiens tetratricopeptide repeat domain 5 (TTC5), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	Strap	Strap
Homo sapiens	RefSeq	XM_929898.1	ILMN_31135	LOC283887	XM_929898.1	XM_929898.1		283887	89040237	XM_929898.1	LOC283887	XP_934991.1	ILMN_1676545	0007650148	S	761	GAAGCTGCTGTTCACGTTTTGGGGAGGATCATGGTTTGAGGGCTCCCGTG	16	+	24986184-24986233		PREDICTED: Homo sapiens hypothetical protein LOC283887 (LOC283887), mRNA.					
Homo sapiens	RefSeq	NM_001012417.1	ILMN_9794	MS4A13	NM_001012417.1	NM_001012417.1		503497	60099475	NM_001012417.1	MS4A13	NP_001012417.1	ILMN_1799504	0004610259	S	78	CTTGCCAGCCGGGATCTTCCTCTTCATCTAGGCCTGGGCGCTGGCGTGAG	11	+	60039539-60039588	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 13 (MS4A13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	RefSeq	NM_001012417.1	ILMN_9794	MS4A13	NM_001012417.1	NM_001012417.1		503497	60099475	NM_001012417.1	MS4A13	NP_001012417.1	ILMN_2233689	0003180086	S	784	AACCCTAGAAATATGAGAATTTTGCTGTTGCTGATGCCTGGTGTGGGTCC	11	+	60066626-60066675	11q12.2a	Homo sapiens membrane-spanning 4-domains, subfamily A, member 13 (MS4A13), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]		
Homo sapiens	Unigene	Hs.292382	ILMN_85089	HS.292382	Hs.292382		Hs.292382		3931121	AI288441			ILMN_1867149	0006940424	S	51	GTGACTCATACTCCACCAGTGCTCATCATCGATCCAGGGTTGACCCTCTT	14	-	100523113-100523162		ql80e06.x1 Soares_NhHMPu_S1 Homo sapiens cDNA clone IMAGE:1878658 3, mRNA sequence					
Homo sapiens	RefSeq	XM_928990.1	ILMN_182138	LOC727762	XM_001125915.1	XM_001125915.1		727762	113414861	XM_001125915.1	LOC727762	XP_001125915.1	ILMN_1721719	0001570400	I	579	AACACCCTAACAACACAGAAGCAGACGCAGCCCGTGTTGGGAATCTGCTG	3	-	99108-99157		PREDICTED: Homo sapiens similar to NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa, transcript variant 2 (LOC727762), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]		Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol [goid 8137] [evidence IEA]		
Homo sapiens	RefSeq	NM_138421.1	ILMN_2421	SAAL1	NM_138421.2	NM_138421.2		113174	116235443	NM_138421.2	SAAL1	NP_612430.2	ILMN_1658678	0005860707	S	1285	CAAAGGAGACGGTGGCTCAGGGAGTAAAGGAAGGCCAGTTGAGCAAACAG	11	-	18103005-18103050:18105082-18105085	11p15.1d	Homo sapiens serum amyloid A-like 1 (SAAL1), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]	Process involving non-antibody proteins whose concentrations in the plasma increase in response to infection or injury of homeothermic animals [goid 6953] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]	FLJ41463	FLJ41463
Homo sapiens	Unigene	Hs.572932	ILMN_125113	HS.572932	Hs.572932		Hs.572932		11445102	BF432939			ILMN_1854169	0001260470	S	447	GTGACAGAAAATAGAATGGTGGTTGCGGGTAGTTGGAGGGTGTGGAGGGG					7n28g05.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone IMAGE:3566024 3, mRNA sequence					
Homo sapiens	RefSeq	NM_153450.1	ILMN_24030	MED19	NM_153450.1	NM_153450.1		219541	23592231	NM_153450.1	MED19	NP_703151.1	ILMN_1754553	0003450427	S	1250	AAAGCTGCCTTCCAGGCTCTTGGACACTGCCTTGGGAGCATCCTGCAGCT	11	-	57471401-57471450	11q12.1b	Homo sapiens mediator complex subunit 19 (MED19), mRNA.	A protein complex that enables the RNA polymerase II-general RNA polymerase II transcription factor complex to react to transcriptional activator proteins; also enhances the level of basal transcription [goid 119] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LCMR1	LCMR1
Homo sapiens	RefSeq	XM_001715961.1	ILMN_351809	LOC100130199	XM_001715961.1	XM_001715961.1		100130199	169206046	XM_001715961.1	LOC100130199	XP_001716013.1	ILMN_3196109	0000990402	A	2	TGATCCACAAGCTGGCAACCCGAGCTCTAATCGGAGATTACGAAGATGGC					PREDICTED: Homo sapiens hypothetical protein LOC100130199 (LOC100130199), mRNA.					
Homo sapiens	RefSeq	NM_015634.2	ILMN_8497	KIAA1279	NM_015634.2	NM_015634.2		26128	72384372	NM_015634.2	KIAA1279	NP_056449.1	ILMN_1745813	0005420110	S	2022	CAGGCCCAATTCCATTGTGATGTTTACCTTTATAGCCAGGTGAGTGCAGT	10	+	70446238-70446287	10q21.3e	Homo sapiens KIAA1279 (KIAA1279), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 16225668] [evidence IDA]	Transport of substances into, out of or within a mitochondrion [goid 6839] [pmid 16225668] [evidence IMP]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16189514] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17353931] [evidence IPI]; Interacting selectively and stoichiometrically with kinesin, a cytoplasmic protein responsible for moving vesicles and organelles towards the distal end of microtubules [goid 19894] [pmid 16225668] [evidence IPI]	DKFZP586B0923; TTC20	DKFZP586B0923; TTC20
Homo sapiens	RefSeq	XM_046264.9	ILMN_175494	LOC729085	XM_001133294.1	XM_001133294.1		729085	113414424	XM_001133294.1	LOC729085	XP_001133294.1	ILMN_1668219	0006940681	I	775	GCATGTTGTGCTCCTGAGGGAGGATGAGGTTGGAGATCCAGGAACCAAAG	3	+	43049158-43049207	3p22.1a	PREDICTED: Homo sapiens hypothetical protein LOC729085 (LOC729085), mRNA.					
Homo sapiens	RefSeq	NM_031307.2	ILMN_175536	PUS3	NM_031307.2	NM_031307.2		83480	31542635	NM_031307.2	PUS3	NP_112597.2	ILMN_2097185	0001050424	S	1534	CCATAGACAATTTGCCAGGATCTAGGAACCACCTAATGGTAGGTGGACAG	11	-	125268839-125268888	11q24.2b	Homo sapiens pseudouridylate synthase 3 (PUS3), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The intramolecular conversion of uridine to pseudouridine in a tRNA molecule [goid 31119] [evidence IEA]	Catalysis of the reaction: RNA uridine = RNA pseudouridine. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5 [goid 9982] [evidence IEA]; Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5 [goid 16853] [evidence IEA]	FKSG32; FLJ23638; 2610020J05Rik	FKSG32; FLJ23638; 2610020J05Rik
Homo sapiens	RefSeq	NM_006227.2	ILMN_12725	PLTP	NM_006227.2	NM_006227.2		5360	33356542	NM_006227.2	PLTP	NP_006218.1	ILMN_1711748	0004260215	I	497	GAAAGTGTCCAATGTCTCCTGCCAGGCCTCTGTCTCCAGAATGCACGCGG	20	-	44538173-44538222	20q13.12b	Homo sapiens phospholipid transfer protein (PLTP), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 7654777] [evidence TAS]	The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids [goid 6629] [pmid 7654777] [evidence TAS]; The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent [goid 6869] [evidence IEA]	Interacting selectively with a lipid [goid 8289] [evidence IEA]	HDLCQ9	HDLCQ9
Homo sapiens	RefSeq	NM_001005471.1	ILMN_26902	OR2T6	NM_001005471.1	NM_001005471.1		254879	53793689	NM_001005471.1	OR2T6	NP_001005471.1	ILMN_1720617	0002140452	S	479	CCCCCATTACCATGAGTCTCCCGTTCTGTGCCTCTCACCAAATCAATCAC	1	+	246618011-246618060	1q44f	Homo sapiens olfactory receptor, family 2, subfamily T, member 6 (OR2T6), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR2T9; OST703; OR2T6P	OR2T9; OST703; OR2T6P
Homo sapiens	RefSeq	NM_032943.2	ILMN_28133	SYTL2	NM_032943.2	NM_032943.2		54843	46255059	NM_032943.2	SYTL2	NP_116561.1	ILMN_2240221	0000780035	I	1280	CTGCAGTGAAGGATGAGCTTCCACAGAGTCCTGGGCTAATCCATGGTCGG	11	-	85122963-85123012	11q14.1e	Homo sapiens synaptotagmin-like 2 (SYTL2), transcript variant a, mRNA.	That fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes [goid 5624] [evidence ISS]; A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles [goid 12505] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Loosely bound to one surface of the plasma membrane, but not integrated into the hydrophobic region [goid 19897] [evidence ISS]; A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells [goid 42470] [evidence ISS]	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell [goid 6886] [evidence IEA]; The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell [goid 16192] [evidence ISS]	Interacting selectively with Rab protein, any member of the Rab subfamily of the Ras superfamily of monomeric GTPases [goid 17137] [evidence IEA]; Interacting selectively with neurexins, synaptic cell surface proteins related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals [goid 42043] [evidence ISS]	MGC102768; CHR11SYT; SGA72M; KIAA1597; SLP2	MGC102768; CHR11SYT; SGA72M; KIAA1597; SLP2
Homo sapiens	RefSeq	NM_001005185.1	ILMN_29285	OR6N1	NM_001005185.1	NM_001005185.1		128372	52353275	NM_001005185.1	OR6N1	NP_001005185.1	ILMN_1754929	0002360717	S	669	CACAGTGCTCAGAATTCCCTCAGCTGCCGGCAAGAGGAAGGCCATCTCCA	1	-	158735754-158735803	1q23.1g	Homo sapiens olfactory receptor, family 6, subfamily N, member 1 (OR6N1), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors [goid 7608] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus [goid 50896] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with airborne compounds to initiate a change in cell activity. These receptors are used for the sense of smell [goid 4984] [evidence IEA]	OR1-22	OR1-22
Homo sapiens	RefSeq	XM_944529.1	ILMN_36310	LOC649317	XM_944529.1	XM_944529.1		649317	89034829	XM_944529.1	LOC649317	XP_949622.1	ILMN_1657948	0000060669	I	1	GGGCACCTTACAGAGCTGGTTGGCTCCTTGGCCCTCACCTTATTTTTTAA					PREDICTED: Homo sapiens hypothetical protein LOC649316, transcript variant 3 (LOC649317), mRNA.					
Homo sapiens	RefSeq	XM_001722259.1	ILMN_340725	LOC388076	XM_001722259.1	XM_001722259.1		388076	169209211	XM_001722259.1	LOC388076	XP_001722311.1	ILMN_3206132	0000940653	A	588	GAGGGCAAAGAGTTGGAGTTCTATCTTAGGAAAATCAAGGCCCGGAAGGG				15q11.2b	PREDICTED: Homo sapiens hypothetical LOC388076 (LOC388076), mRNA.					
Homo sapiens	RefSeq	NR_030368.1	ILMN_388154	MIR638	NR_030368.1	NR_030368.1		693223	262206178	NR_030368.1	MIR638		ILMN_3309128	0000150768	S	36	GCCTAGGGCGCGGAGGGCGGACCGGGAATGGCGCGCCGTGCGCCGCCGGC					Homo sapiens microRNA 638 (MIR638), microRNA.					
Homo sapiens	RefSeq	NM_145282.1	ILMN_30090	LOC153328	NM_145282.1	NM_145282.1		153328	28460691	NM_145282.1	LOC153328	NP_660325.1	ILMN_1746952	0002340132	S	915	ACTCCCTCCAGTCTCAAGTAACACGTCCCCGTGCCTCCAGTCTCCTCTCA	5	+	135251992-135252041	5q31.1f	Homo sapiens similar to CG4995 gene product (LOC153328), mRNA.					
Homo sapiens	RefSeq	NM_001825.1	ILMN_8974	CKMT2	NM_001825.2	NM_001825.2		1160	153251981	NM_001825.2	CKMT2	NP_001816.2	ILMN_1764266	0003830315	S	1444	TGGAGAGAGGCCAAGATATTAAGGTGCCACCCCCTCTGCCTCAGTTTGGC	5	+	80562019-80562068	5q14.1f	Homo sapiens creatine kinase, mitochondrial 2 (sarcomeric) (CKMT2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 2324105] [evidence TAS]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The chemical reactions and pathways involving creatine (N-(aminoiminomethyl)-N-methylglycine), a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle [goid 6600] [pmid 10893433] [evidence EXP]; A process whereby force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step. The chemo-mechanical energy conversion step is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis [goid 6936] [pmid 2324105] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + creatine = ADP + phosphocreatine [goid 4111] [pmid 2324105] [evidence TAS]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]	SMTCK	SMTCK
Homo sapiens	RefSeq	NR_024609.1	ILMN_370101	FLJ44054	NR_024609.1	NR_024609.1		643365	218749881	NR_024609.1	FLJ44054		ILMN_3236599	0007610553	S	2747	CAGCGATGAGGACATCTGCACCCGAAACATGGGGCAGGGGTGACTAACAG	13	+	114626304-114626353	13q34d	Homo sapiens hypothetical protein LOC643365 (FLJ44054), non-coding RNA.					
Homo sapiens	RefSeq	XM_001713833.1	ILMN_353238	LOC100133814	XM_001713833.1	XM_001713833.1		100133814	169166719	XM_001713833.1	LOC100133814	XP_001713885.1	ILMN_3249700	0002680669	S	181	AGTATCTGCTTCTTTTCCATCAATCATCTGCAGATCGTTCAAAGACCACT					PREDICTED: Homo sapiens hypothetical protein LOC100133814 (LOC100133814), mRNA.					
Homo sapiens	Unigene	Hs.543842	ILMN_107359	HS.543842	Hs.543842		Hs.543842		5448200	AI827529			ILMN_1842191	0006590047	S	160	TTCTGGCTTTTGTTGGGGGTGGAGCGGTGGGGGGCTTTGATGCCATGAGT	5	-	150979989-150980038		wf10a02.x1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA clone IMAGE:2350154 3, mRNA sequence					
Homo sapiens	RefSeq	NM_017725.1	ILMN_25346	GPATC4	NM_017725.1	NM_017725.1		54865	33356553	NM_017725.1	GPATC4	NP_060195.1	ILMN_1655230	0006370402	I	470	TGTGACCAGCCTTGCTGTTGCTTACTTAGACTGCCCAGACCCTCAGCAGG	1	-	154834280-154834329	1q23.1a	Homo sapiens G patch domain containing 4 (GPATC4), transcript variant 3, mRNA.					
Homo sapiens	RefSeq	XM_928291.3	ILMN_37977	LOC645249	XM_928291.3	XM_928291.3		645249	169170061	XM_928291.3	LOC645249	XP_933384.2	ILMN_3275615	0005870392	M	1100	CGCAGACAACATACAACTCGACAGAGTCACAGAAGGTGGCGTCCATCGCG	7	+	156501740-156501789	7q36.3c	PREDICTED: Homo sapiens hypothetical protein LOC645249 (LOC645249), mRNA.					
Homo sapiens	RefSeq	NM_003830.1	ILMN_10829	SIGLEC5	NM_003830.1	NM_003830.1		8778	4502658	NM_003830.1	SIGLEC5	NP_003821.1	ILMN_1740298	0006650064	S	1790	AGCAAGTGAGGATTTGCCCAGAGTTCAGTCCTGGCTGGAGGAGCCACAGC	19	-	56807237-56807286	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 5 (SIGLEC5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	OB-BP2; OBBP2; SIGLEC-5; CD170; CD33L2	OB-BP2; OBBP2; SIGLEC-5; CD170; CD33L2
Homo sapiens	RefSeq	XM_929209.1	ILMN_10829	SIGLEC5	NM_003830.1	NM_003830.1		8778	4502658	NM_003830.1	SIGLEC5	NP_003821.1	ILMN_1652381	0004640270	S	296	TCCTCTCCCCCACTCTACGTCTACTGGTTCCGGGACGGGGAGATCCCATA	19	-	56825098-56825147	19q13.33d	Homo sapiens sialic acid binding Ig-like lectin 5 (SIGLEC5), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 18029348] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any mono-, di- or trisaccharide carbohydrate [goid 5529] [evidence IEA]	OB-BP2; OBBP2; SIGLEC-5; CD170; CD33L2	
Homo sapiens	RefSeq	NR_001540.1	ILMN_8488	TTTY23	NR_001540.1	NR_001540.1		252955	32563542	NR_001540.1	TTTY23		ILMN_3236300	0000510411	S	121	GCTGCAGGCAGTACACCTCCTACCTGAGCTTTTTCACCTGTTTGGCTGAA	Y	+	9748640-9748689	Yp11.2b	Homo sapiens testis-specific transcript, Y-linked 23 (non-protein coding) (TTTY23), non-coding RNA.					
Homo sapiens	RefSeq	NM_181688.1	ILMN_26494	KRTAP10-10	NM_181688.1	NM_181688.1		353333	32140181	NM_181688.1	KRTAP10-10	NP_859016.1	ILMN_2135306	0006060615	S	1035	AGGCCTGGTTCCACCCTGGGCAGCACCCCCTCTAGTTCTAATAAAGCCGC	21	+	44882735-44882784	21q22.3d	Homo sapiens keratin associated protein 10-10 (KRTAP10-10), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KRTAP18.10; KAP18.10; KRTAP18-10; KAP10.10	KRTAP18.10; KAP18.10; KRTAP18-10; KAP10.10
Homo sapiens	RefSeq	NM_198688.1	ILMN_26494	KRTAP10-10	NM_181688.1	NM_181688.1		353333	32140181	NM_181688.1	KRTAP10-10	NP_859016.1	ILMN_1688334	0003290327	S	853	AGGGGCTGACCTCCCAGCTGCCCCAGCAAGCTCTGCCCTCTCTGGCTTTG	21	+	44882553-44882602	21q22.3d	Homo sapiens keratin associated protein 10-10 (KRTAP10-10), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KRTAP18.10; KAP18.10; KRTAP18-10; KAP10.10	KAP10.6; KAP18.6; KRTAP18-6; KRTAP18.6
Homo sapiens	RefSeq	NM_181688.1	ILMN_26494	KRTAP10-10	NM_181688.1	NM_181688.1		353333	32140181	NM_181688.1	KRTAP10-10	NP_859016.1	ILMN_1710929	0006280239	S	377	CGTGCCCGTCTGTAACAAGCCTGTGTGCTTCGTGCCTACCTGCTCCGAGT	21	+	44882077-44882126	21q22.3d	Homo sapiens keratin associated protein 10-10 (KRTAP10-10), mRNA.	A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]; A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins [goid 45095] [evidence IEA]			KRTAP18.10; KAP18.10; KRTAP18-10; KAP10.10	KRTAP18.10; KAP18.10; KRTAP18-10; KAP10.10
Homo sapiens	RefSeq	NM_001008565.1	ILMN_9495	NUPL1	NM_001008565.1	NM_001008565.1		9818	56788378	NM_001008565.1	NUPL1	NP_001008565.1	ILMN_1685343	0002260121	I	1743	CAAGTTGGAATTGTCATGTTACTGTGTAATTGATTTGCTTTACAATGAAC	13	+	24808412-24808461	13q12.13a	Homo sapiens nucleoporin like 1 (NUPL1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PRO2463; KIAA0410	PRO2463; KIAA0410
Homo sapiens	RefSeq	NM_001008565.1	ILMN_9495	NUPL1	NM_001008565.1	NM_001008565.1		9818	56788378	NM_001008565.1	NUPL1	NP_001008565.1	ILMN_1746317	0004250066	A	1514	TGTTCTTGGGAGATGCTGTTGATGTGTTTGAAACAAGGCGAGCAGAAGCC	13	+	24803529-24803578	13q12.13a	Homo sapiens nucleoporin like 1 (NUPL1), transcript variant 3, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined [goid 5643] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space [goid 31965] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of proteins into, out of, within or between cells [goid 15031] [evidence IEA]; The directed movement of mRNA, messenger ribonucleic acid, into, out of, within or between cells [goid 51028] [evidence IEA]; The directed movement of proteins in a cell, from one side of a membrane to another [goid 65002] [evidence IEA]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	PRO2463; KIAA0410	PRO2463; KIAA0410
Homo sapiens	RefSeq	XM_001723153.1	ILMN_335432	LOC100131271	XM_001723153.1	XM_001723153.1		100131271	169207281	XM_001723153.1	LOC100131271	XP_001723205.1	ILMN_3199628	0002230445	A	1265	GTTCGAGACCAGCCTGGAAAACATAGCAAGACCTCATCTCTATAAAACCC					PREDICTED: Homo sapiens hypothetical LOC100131271 (LOC100131271), mRNA.					
Homo sapiens	RefSeq	XM_001723153.1	ILMN_335432	LOC100131271	XM_001723153.1	XM_001723153.1		100131271	169207281	XM_001723153.1	LOC100131271	XP_001723205.1	ILMN_3276095	0004730477	M	916	GGCCTTGCCTGGAGAGAGACCGAGTTAAGCCACCGATTAGGAACCAACTC					PREDICTED: Homo sapiens hypothetical LOC100131271 (LOC100131271), mRNA.					
Homo sapiens	RefSeq	NM_207428.1	ILMN_30331	C11ORF55	NM_207428.1	NM_207428.1		399879	46409481	NM_207428.1	C11orf55	NP_997311.1	ILMN_2063051	0003370047	S	2601	GCTGAGGTGGGAGGACTTCTTGAGCTTGACTGAGGTGGCAGTGAGCTGAG	11	-	36247497-36247546	11p13a	Homo sapiens chromosome 11 open reading frame 55 (C11orf55), mRNA.				FLJ45212	FLJ45212
Homo sapiens	RefSeq	NM_014556.2	ILMN_24090	EVC	NM_014556.2	NM_014556.2		2121	24497529	NM_014556.2	EVC	NP_055371.1	ILMN_1720941	0003420309	I	6706	GTTACTTCCCAGGATTTGCTCTGCCCCAAACGAGCTGTTCATAACAGCGA	4	+	5881316-5881365	4p16.1g	Homo sapiens Ellis van Creveld syndrome (EVC), transcript variant 1, mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process whose specific outcome is the progression of the skeleton over time, from its formation to the mature structure. The skeleton is the bony framework of the body in vertebrates (endoskeleton) or the hard outer envelope of insects (exoskeleton or dermoskeleton) [goid 1501] [pmid 10700184] [evidence TAS]; The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work [goid 7517] [pmid 10700184] [evidence TAS]		EVCL; MGC105107; DWF-1	EVCL; MGC105107; DWF-1
Homo sapiens	RefSeq	NM_032871.3	ILMN_5604	RELT	NM_032871.3	NM_032871.3		84957	23238198	NM_032871.3	RELT	NP_116260.2	ILMN_1787237	0007550463	I	20	TTCCGCGCACCGGCCACCGCCAGTCTCCGAGCCCCGTGACCTGCAGGTCC	11	+	72765380-72765429	11q13.4b	Homo sapiens RELT tumor necrosis factor receptor (RELT), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	FLJ14993; TNFRSF19L; RELT	TNFRSF19L; FLJ14993; RELT
Homo sapiens	RefSeq	NM_021944.1	ILMN_11237	C14ORF93	NM_021944.1	NM_021944.1		60686	11345485	NM_021944.1	C14orf93	NP_068763.1	ILMN_1724897	0004610484	S	1948	CACCTGGCTCCCCATCTTTTGACCAACCCCACAAAACCTGCTGTCCTGAC	14	-	22526305-22526354	14q11.2f	Homo sapiens chromosome 14 open reading frame 93 (C14orf93), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]			FLJ12154	FLJ12154
Homo sapiens	RefSeq	NM_001024608.1	ILMN_10354	LOC158318	NM_001024608.1	NM_001024608.1		158318	66912189	NM_001024608.1	LOC158318	NP_001019779.1	ILMN_1797579	0005890026	S	841	AGGCTGCGTCCCCTTCAAAGAACGCCACCGCTGAGAACTGACCCTCACAT	9	-	46276137-46276186	9p11.2a	Homo sapiens similar to hypothetical protein MGC42630 (LOC158318), mRNA.					
Homo sapiens	RefSeq	XR_039410.1	ILMN_343785	LOC645515	XR_039410.1	XR_039410.1		645515	169165667	XR_039410.1	LOC645515		ILMN_3285959	0000830097	M	859	AGAGAGCCCAGAGGGAGGAAGAAGCCAGACGACAGTCAGGAGCACAGTAT				3q24a	PREDICTED: Homo sapiens misc_RNA (LOC645515), miscRNA.					
Homo sapiens	RefSeq	NM_001035256.1	ILMN_21608	POMC	NM_001035256.1	NM_001035256.1		5443	80861462	NM_001035256.1	POMC	NP_001030333.1	ILMN_2403664	0005080072	A	904	AGAAGAAGGACGAGGGCCCCTACAGGATGGAGCACTTCCGCTGGGGCAGC	2	-	25384063-25384112	2p23.3c	Homo sapiens proopiomelanocortin (POMC), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9620771] [evidence TAS]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 9620771] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9620771] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9620771] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 9620771] [evidence TAS]	POC; LPH; ACTH; NPP; MSH; CLIP	POC; LPH; ACTH; NPP; MSH; CLIP
Homo sapiens	RefSeq	NM_000939.1	ILMN_21608	POMC	NM_001035256.1	NM_001035256.1		5443	80861462	NM_001035256.1	POMC	NP_001030333.1	ILMN_1672899	0005260291	S	1029	AACGCCATCATCAAGAACGCCTACAAGAAGGGCGAGTGAGGGCACAGCGG	2	-	25383938-25383949:25383950-25383987	2p23.3c	Homo sapiens proopiomelanocortin (POMC), transcript variant 1, mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]; That fraction of cells, prepared by disruptive biochemical methods, that is soluble in water [goid 5625] [pmid 9620771] [evidence TAS]; A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules [goid 30141] [evidence IEA]	The chemical reactions and pathways resulting in the formation of precursor metabolites, substances from which energy is derived, and any process involved in the liberation of energy from these substances [goid 6091] [pmid 9620771] [evidence TAS]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9620771] [evidence TAS]; The series of molecular signals generated as a consequence of a peptide neurotransmitter binding to a cell surface receptor [goid 7218] [evidence IEA]; Any process that mediates the transfer of information from one cell to another [goid 7267] [pmid 9620771] [evidence TAS]; The process that modulates the force with which blood travels through the circulatory system. The process is controlled by a balance of processes that increase pressure and decrease pressure [goid 8217] [evidence IEA]	The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects [goid 5179] [pmid 9620771] [evidence TAS]	POC; LPH; ACTH; NPP; MSH; CLIP	POC; ACTH; MSH; CLIP
Homo sapiens	RefSeq	NM_152358.2	ILMN_162147	C19ORF41	NM_152358.2	NM_152358.2		126123	63999116	NM_152358.2	C19orf41	NP_689571.2	ILMN_1684854	0002760717	S	612	GTACCAGATGGACAGCAAATACCCGAGGAACCAGGCGCTGTTGGGCATCC	19	-	55349717-55349766	19q13.33c	Homo sapiens chromosome 19 open reading frame 41 (C19orf41), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			PLAL6978; PRO21961; SCRL; MGC33947	PLAL6978; PRO21961; SCRL; MGC33947
Homo sapiens	RefSeq	NM_021732.1	ILMN_9920	AVPI1	NM_021732.1	NM_021732.1		60370	11119427	NM_021732.1	AVPI1	NP_068378.1	ILMN_1671731	0000990500	S	1259	ACTGTAAACCATGGTTCCAGCAGCCTGTTCCACACCCCCACACCATCAGG	10	-	99427209-99427258	10q24.2a	Homo sapiens arginine vasopressin-induced 1 (AVPI1), mRNA.		The initiation of the activity of the inactive enzyme MAP kinase by phosphorylation by a MAPKK [goid 187] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]		VIP32; PP5395; VIT32; RP11-548K23.7	VIP32; PP5395; VIT32; RP11-548K23.7
Homo sapiens	RefSeq	XM_932619.1	ILMN_33564	LOC286411	XM_932619.2	XM_932619.2		286411	113430147	XM_932619.2	LOC286411	XP_937712.2	ILMN_1699113	0000240170	A	1142	GCACGTAGAGTCACCCCGCAAAGCACAGACTAAACCCATACTACAGAGAC	X	+	139624146-139624195	Xq27.1c-q27.1d	PREDICTED: Homo sapiens hypothetical protein LOC286411 (LOC286411), mRNA.					
Homo sapiens	RefSeq	XM_942964.1	ILMN_33564	LOC286411	XM_932619.2	XM_932619.2		286411	113430147	XM_932619.2	LOC286411	XP_937712.2	ILMN_1766757	0001230471	I	89	GCACAGTTCTGGCTCTGAAATGCCATAAAGCAGACATCTCAATGAAGGTG	X	+	139607890-139607939	Xq27.1c-q27.1d	PREDICTED: Homo sapiens hypothetical protein LOC286411 (LOC286411), mRNA.					
Homo sapiens	RefSeq	XR_037326.1	ILMN_336931	LOC100132238	XR_037326.1	XR_037326.1		100132238	169206875	XR_037326.1	LOC100132238		ILMN_3237363	0005260017	S	571	TTCACCTAGGGCCTGGTGTCCACTTAGGGCTTGAGTGTCAACCTTAGGTC	14	-	18895161-18895210	14q11.1d	PREDICTED: Homo sapiens misc_RNA (LOC100132238), miscRNA.					
Homo sapiens	RefSeq	XM_945108.1	ILMN_33640	LOC652015	XM_945108.1	XM_945108.1		652015	88955058	XM_945108.1	LOC652015	XP_950201.1	ILMN_1673316	0006510064	S	1099	CCCCGTCCGCAGCGCCCACAGCCACCGACATTCACGAGAGAGACGAATAG					PREDICTED: Homo sapiens hypothetical protein LOC652015 (LOC652015), mRNA.					
Homo sapiens	RefSeq	XM_001717089.1	ILMN_351242	LOC100132168	XM_001717089.1	XM_001717089.1		100132168	169165074	XM_001717089.1	LOC100132168	XP_001717141.1	ILMN_3248273	0003420280	S	50	AGGCAAGGCCTGGGGTTAACAGTGCCTGGCTCGCGGCGCTGGAAGTCCGC	3	-	33130990-33131013:33134109-33134134	3p22.3c	PREDICTED: Homo sapiens hypothetical protein LOC100132168 (LOC100132168), mRNA.					
Homo sapiens	Unigene	Hs.547797	ILMN_109647	HS.547797	Hs.547797		Hs.547797		27833484	BX105370			ILMN_1827632	0002760484	S	150	AGGACTGGAGCCCACACCTGCGTGACTCTAAAGTGCCCACTCTTCTGTGC	8	-	10649990-10650039		BX105370 NCI_CGAP_Lu5 Homo sapiens cDNA clone IMAGp998D134019, mRNA sequence					
Homo sapiens	RefSeq	NM_198857.1	ILMN_172848	SLC6A10P	NR_003083.2	NR_003083.2		386757	141802548	NR_003083.2	SLC6A10P		ILMN_1772482	0000830010	I	1156	GGCCTGGGCTATGCCTCCATGGTGATCGTTTTCTACTGCAACACCTACTA	16	-	32894052-32894101	16p11.2b	Homo sapiens solute carrier family 6 (neurotransmitter transporter, creatine), member 10 (pseudogene) (SLC6A10P) on chromosome 16.				CT-2; CT2; FLJ43855; SLC6A10pB; SLC6A10	
Homo sapiens	RefSeq	NM_198857.1	ILMN_172848	SLC6A10P	NR_003083.2	NR_003083.2		386757	141802548	NR_003083.2	SLC6A10P		ILMN_1704446	0007610615	A	3685	GTCCCGAGACGGCTGAGTGACCCCAAGAAAGGCTTCCCTGACACCCGGAC	16	-	32888901-32888950	16p11.2b	Homo sapiens solute carrier family 6 (neurotransmitter transporter, creatine), member 10 (pseudogene) (SLC6A10P) on chromosome 16.				CT-2; CT2; FLJ43855; SLC6A10pB; SLC6A10	
Homo sapiens	RefSeq	NM_004761.2	ILMN_5005	RGL2	NM_004761.2	NM_004761.2		5863	21361071	NM_004761.2	RGL2	NP_004752.1	ILMN_2124386	0002650136	S	2558	CAGAAATTCAGAAAGGGAGCCAGCCACCCTGGGGCAGTGAAGTGCCACTG	6	-	33367716-33367765	6p21.32a	Homo sapiens ral guanine nucleotide dissociation stimulator-like 2 (RGL2), mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]; The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 8976381] [evidence NAS]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction [goid 51056] [evidence IEA]; Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals [goid 7264] [evidence IEA]	Stimulates the exchange of guanyl nucleotides by a GTPase of the Ras superfamily. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5088] [pmid 8976381] [evidence NAS]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence IEA]; Stimulates the exchange of guanyl nucleotides by a GTPase. Under normal cellular physiological conditions, the concentration of GTP is higher than that of GDP, favoring the replacement of GDP by GTP in association with the GTPase [goid 5085] [evidence NAS]	HKE1.5; RAB2L; KE1.5	HKE1.5; RAB2L; KE1.5
Homo sapiens	RefSeq	NM_002941.2	ILMN_26076	ROBO1	NM_002941.2	NM_002941.2		6091	19743804	NM_002941.2	ROBO1	NP_002932.1	ILMN_1666468	0004540113	I	109	GGGAACGACCACGGGACGCCAATCCCCACCTCTGATAACGATGACAATTC	3	-	79257309-79257358	3p12.3b	Homo sapiens roundabout, axon guidance receptor, homolog 1 (Drosophila) (ROBO1), transcript variant 1, mRNA.	Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9608531] [evidence TAS]; The external part of the cell wall and/or plasma membrane [goid 9986] [pmid 12504588] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]	The directed movement of a motile cell or organism, or the directed growth of a cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis) [goid 6935] [evidence IEA]; The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules [goid 7155] [pmid 9608531] [evidence TAS]; The attachment of an adhesion molecule in one cell to an identical molecule in an adjacent cell [goid 7156] [pmid 12504588] [evidence IDA]; The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process whose specific outcome is the progression of nervous tissue over time, from its formation to its mature state [goid 7399] [pmid 9608531] [evidence TAS]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of axonogenesis [goid 50772] [pmid 12504588] [evidence IDA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA];  [goid 8046] [pmid 9458045] [evidence TAS]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 12504588] [evidence IDA]	SAX3; DUTT1; MGC133277; FLJ21882; MGC131599	SAX3; DUTT1; MGC133277; FLJ21882; MGC131599
Homo sapiens	RefSeq	NR_015364.1	ILMN_334643	LOC441204	NR_015364.1	NR_015364.1		441204	168693610	NR_015364.1	LOC441204		ILMN_3248980	0006980136	S	1100	GTGCCATGAAGAATAATGCCCAATAGTATTTCAGGGGCTGCCAAGCTGCT	7	+	26534484-26534508:26534639-26534663		Homo sapiens hypothetical locus LOC441204 (LOC441204), non-coding RNA.					
Homo sapiens	RefSeq	NM_001003678.1	ILMN_29771	C11ORF49	NM_024113.3	NM_024113.3		79096	51558739	NM_024113.3	C11orf49	NP_077018.1	ILMN_1664773	0003310575	A	734	TGTGATCGGCACAAGTACAGCTGCCCACCCCCAGCACTTGTCAAAGAGGC	11	+	47074031-47074069:47115772-47115782	11p11.2b	Homo sapiens chromosome 11 open reading frame 49 (C11orf49), transcript variant 3, mRNA.				FLJ22210; MGC4707	FLJ22210; MGC4707
Homo sapiens	RefSeq	XM_936773.1	ILMN_39181	LOC647713	XM_936773.1	XM_936773.1		647713	89035868	XM_936773.1	LOC647713	XP_941866.1	ILMN_1691691	0006650678	S	186	CCCTGGTGGCCTCCGCACCCCAACAAATGACAGGAAGACCAGAAACTGCT					PREDICTED: Homo sapiens similar to double homeobox, 4 (LOC647713), mRNA.					
Homo sapiens	RefSeq	XM_935056.1	ILMN_32636	LOC653663	XM_935056.1	XM_935056.1		653663	88953125	XM_935056.1	LOC653663	XP_940149.1	ILMN_1741324	0006420494	I	20	GAATGCCTAGAGAGAGTCGGCTTGGTTTATAGGCCAGGTGGTTTTCATTC	2	+	87802649-87802698		PREDICTED: Homo sapiens similar to anaphase promoting complex subunit 1, transcript variant 4 (LOC653663), mRNA.					
Homo sapiens	RefSeq	NM_000133.2	ILMN_7077	F9	NM_000133.2	NM_000133.2		2158	10518507	NM_000133.2	F9	NP_000124.1	ILMN_1810651	0007560372	S	2522	TCAGCAGTGTTCAGAGCCAAGCAAGAAGTTGAAGTTGCCTAGACCAGAGG	X	+	138473003-138473052	Xq27.1b	Homo sapiens coagulation factor IX (plasma thromboplastic component, Christmas disease, hemophilia B) (F9), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 14718574] [evidence NAS]; The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [pmid 8626656] [evidence EXP]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 8626656] [evidence EXP]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 2110473] [evidence EXP]	The hydrolysis of a peptide bond or bonds within a protein [goid 6508] [evidence IEA]; A pathway of blood coagulation in which the earlier stages of the cascade are bypassed and the activation of factor X to factor Xa is effected by the combination of factor VIIa + thromboplastin; this second pathway occurs when tissue extracts are present in optimal amounts and is much more rapid than the intrinsic pathway [goid 7598] [pmid 7598447] [evidence EXP]	Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [pmid 2472424] [evidence TAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	MGC129641; HEMB; MGC129642; GLA domain; PTC; FIX	HEMB; MGC129642; MGC129641; GLA domain; PTC; FIX
Homo sapiens	RefSeq	XR_038458.1	ILMN_339709	LOC345041	XR_038458.1	XR_038458.1		345041	169167144	XR_038458.1	LOC345041		ILMN_3204890	0001510484	A	1177	ACACTGGCAAAACTTTCAGATGGAGTAGCTGTGCTGAAGGTTGGTGGGAC				4q31.22a	PREDICTED: Homo sapiens misc_RNA (LOC345041), miscRNA.					
Homo sapiens	RefSeq	XR_041703.1	ILMN_336756	LOC728537	XR_041703.1	XR_041703.1		728537	169163860	XR_041703.1	LOC728537		ILMN_3298511	0000160504	M	961	GCTTTACCATAGGACACTTGTGGCAATATGGCACCGATGGCTGGCGTCGG				2q11.2b	PREDICTED: Homo sapiens misc_RNA (LOC728537), miscRNA.					
Homo sapiens	RefSeq	XM_001722242.1	ILMN_340552	LOC100134785	XM_001722242.1	XM_001722242.1		100134785	169170164	XM_001722242.1	LOC100134785	XP_001722294.1	ILMN_3240094	0001450154	S	4509	AAATAAGATGGGTTGACGGAGGGGTGGGGGGACGGAGAGGTGACTGGGTC	7	-	526775-526824		PREDICTED: Homo sapiens hypothetical protein LOC100134785 (LOC100134785), mRNA.					
Homo sapiens	RefSeq	XR_015474.1	ILMN_169389	LOC728640	XR_015474.1	XR_015474.1		728640	113421534	XR_015474.1	LOC728640		ILMN_3225406	0005720491	A	498	CTGGTTTCCCTCGGCGTGCCACTGTGTGCTCAGTCCAGCACCATGGGGAA	10	+	60145278-60145327	10q21.1f	PREDICTED: Homo sapiens misc_RNA (LOC728640), miscRNA.					
Homo sapiens	RefSeq	NM_199204.1	ILMN_25196	DHRS9	NM_199204.1	NM_199204.1		10170	40548396	NM_199204.1	DHRS9	NP_954674.1	ILMN_1727150	0005290292	I	195	TACTCCAGAAGTTGGACCCACCACAGCCTGCACACTGGACTTCTTGGCTT	2	+	169631985-169632023:169634209-169634219	2q31.1a	Homo sapiens dehydrogenase/reductase (SDR family) member 9 (DHRS9), transcript variant 2, mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [pmid 11294878] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [pmid 11294878] [evidence IDA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence ISS]; Penetrating at least one phospholipid bilayer of an endoplasmic reticulum membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 30176] [evidence ISS]	The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 8209] [pmid 11294878] [evidence IDA]; The process whereby a relatively unspecialized cell acquires specialized features of an epithelial cell, any of the cells making up an epithelium [goid 30855] [pmid 11304534] [evidence NAS]; The chemical reactions and pathways involving progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants [goid 42448] [pmid 11294878] [evidence IDA]; The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A [goid 42572] [pmid 11304534] [evidence NAS]; The chemical reactions and pathways resulting in the formation of 9-cis-retinoic acid, a metabolically active vitamin A derivative [goid 42904] [pmid 11304534] [evidence IDA]; The chemical reactions and pathways resulting in the formation of 9-cis-retinoic acid, a metabolically active vitamin A derivative [goid 42904] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]; The chemical reactions and pathways involving androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics [goid 8209] [evidence ISS]; The chemical reactions and pathways resulting in the formation of 9-cis-retinoic acid, a metabolically active vitamin A derivative [goid 42904] [evidence ISS]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence ISS]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [pmid 11304534] [evidence IDA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [pmid 11304534] [evidence IDA]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence ISS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of a reaction that alters the configuration of one or more chiral centers in a molecule [goid 16854] [pmid 11294878] [evidence NAS]; Catalysis of the reaction: NAD+ + testosterone = NADH + H+ + androst-4-ene-3,17-dione [goid 47035] [pmid 11294878] [evidence IDA]; Catalysis of the reaction: NAD+ + testosterone = NADH + H+ + androst-4-ene-3,17-dione [goid 47035] [evidence ISS]; Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+ [goid 4022] [evidence ISS]; Catalysis of the reaction: retinol + NAD+ = retinal + NADH + H+ [goid 4745] [evidence ISS]; The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: NAD+ + testosterone = NADH + H+ + androst-4-ene-3,17-dione [goid 47035] [evidence ISS]	RDHL; 3alpha-HSD; RETSDR8; RDH15	RDHL; 3alpha-HSD; RETSDR8; RDH15
Homo sapiens	RefSeq	NM_001169.2	ILMN_11785	AQP8	NM_001169.2	NM_001169.2		343	45446751	NM_001169.2	AQP8	NP_001160.2	ILMN_1713462	0002470064	S	1131	ACGAGCGTGTTTCTTGAGAGGAATGTCCCCGAGTTGGACAAGGAGGCTGT	16	+	25147577-25147626	16p12.1b	Homo sapiens aquaporin 8 (AQP8), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 9806845] [evidence TAS]; Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer [goid 5887] [pmid 9806845] [evidence TAS]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [pmid 9806845] [evidence TAS]; The directed movement of water (H2O) into, out of, within or between cells [goid 6833] [pmid 9806845] [evidence TAS]	Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells [goid 5215] [evidence IEA]; Transport systems of this type catalyze facilitated diffusion of water (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism [goid 15250] [pmid 9806845] [evidence TAS]		
Homo sapiens	RefSeq	NR_002328.3	ILMN_2497	GNRHR2	NR_002328.3	NR_002328.3		114814	121583732	NR_002328.3	GNRHR2		ILMN_2224619	0000520097	S	4580	GATTCAGTTGGAAAACCCAGCAATTTAACAAAAAGGGGGAGGGGCAGCCC	1	-	145511447-145511496	1q21.1b	Homo sapiens gonadotropin-releasing hormone (type 2) receptor 2 (GNRHR2), non-coding RNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; Combining with gonadotropin-releasing hormone to initiate a change in cell activity [goid 4968] [evidence IEA]; Combining with gonadotropin-releasing hormone to initiate a change in cell activity [goid 4968] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]	GnRH-II-R	GnRH-II-R
Homo sapiens	RefSeq	NM_006201.3	ILMN_11214	PCTK1	NM_006201.3	NM_006201.3		5127	53729342	NM_006201.3	PCTK1	NP_006192.1	ILMN_1714569	0002480725	I	65	CGCGATCAGACCGCTCTGTGCCGCGAGCCGCCGTGAGCACTCGGATTCAA	X	+	46963123-46963172	Xp11.3a	Homo sapiens PCTAIRE protein kinase 1 (PCTK1), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [pmid 18029348] [evidence IDA]	The process of introducing a phosphate group on to a protein [goid 6468] [pmid 1437147] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein; dependent on the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK) [goid 4693] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16091426] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	PCTGAIRE; PCTAIRE1; PCTAIRE; FLJ16665	PCTGAIRE; PCTAIRE1; PCTAIRE; FLJ16665
Homo sapiens	RefSeq	NM_058219.2	ILMN_15247	EXOSC6	NM_058219.2	NM_058219.2		118460	32484988	NM_058219.2	EXOSC6	NP_478126.1	ILMN_1670218	0006330025	S	1629	TGTGTGTTTTCTGCGGCCCTGGATAATGCTGTAGCATTCAGGGTCGATTG	16	-	70284155-70284204	16q22.1f	Homo sapiens exosome component 6 (EXOSC6), mRNA.	Complex of 3'-5' exoribonucleases [goid 178] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules [goid 6364] [evidence IEA]; Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules [goid 6396] [evidence IEA]	Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of an RNA molecule [goid 175] [evidence IEA]; Interacting selectively with an RNA molecule or a portion thereof [goid 3723] [evidence IEA]; Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end [goid 4527] [evidence IEA]; Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3 [goid 16787] [evidence IEA]	hMtr3p; MTR3; p11; EAP4; Mtr3p	hMtr3p; MTR3; p11; EAP4; Mtr3p
Homo sapiens	RefSeq	XM_945400.1	ILMN_30913	LOC389442	XM_945400.1	XM_945400.1		389442	88999533	XM_945400.1	LOC389442	XP_950493.1	ILMN_1793836	0002140187	A	783	GTTGGGATTAGCAGACCAGTGGACCAGCGGACCAGCAGACCAGTTAACGG					PREDICTED: Homo sapiens hypothetical LOC389442 (LOC389442), mRNA.					
Homo sapiens	RefSeq	NM_001007542.1	ILMN_164641	FLJ40453	NM_001007542.1	NM_001007542.1		401217	56090569	NM_001007542.1	FLJ40453	NP_001007543.1	ILMN_1689807	0005550551	S	1105	AGAAGATACATGAGGTTCTATTCTTAGGGGCATAGGCCTTCCAGTGACTG	5	+	171657364-171657413	5q35.1e	Homo sapiens FLJ40453 protein (FLJ40453), mRNA.					
Homo sapiens	RefSeq	NM_001007542.1	ILMN_164641	FLJ40453	NM_001007542.1	NM_001007542.1		401217	56090569	NM_001007542.1	FLJ40453	NP_001007543.1	ILMN_2129102	0005900541	S	1353	GGGTTGAAACCCCCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAG	5	+	171657612-171657661	5q35.1e	Homo sapiens FLJ40453 protein (FLJ40453), mRNA.					
Homo sapiens	RefSeq	XM_945941.1	ILMN_138340	CYP4Z1	XM_945941.1	XM_945941.1		199974	88947718	XM_945941.1	CYP4Z1	XP_951034.1	ILMN_1747874	0002000356	I	33	AAAAGACAGAATCTTCGCTCATGCACTTACCTGCTTTTTCTTCTGTTTAC				1p33d	PREDICTED: Homo sapiens cytochrome P450, family 4, subfamily Z, polypeptide 1, transcript variant 3 (CYP4Z1), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic cells are homogenized and that sediment on centrifugation at 100000 g [goid 5792] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water [goid 4497] [evidence IEA]; Interacting selectively with iron (Fe) ions [goid 5506] [evidence IEA]; Any molecular entity that serves as an electron acceptor and electron donor in an electron transport system [goid 9055] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]; Catalysis of the reaction: RH + reduced flavoprotein + O2 = ROH + oxidized flavoprotein + H2O [goid 50381] [evidence IEA]		
Homo sapiens	RefSeq	NM_002640.3	ILMN_11827	SERPINB8	NM_002640.3	NM_002640.3		5271	38504672	NM_002640.3	SERPINB8	NP_002631.3	ILMN_2397028	0001770376	A	820	AGGAGCTGAGCATGGTCATTCTGCTTCCCGATGACAACACGGACCTCGCC	18	+	59803407-59803456	18q21.33b-q22.1a	Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin), member 8 (SERPINB8), transcript variant 1, mRNA.	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; That part of the cytoplasm that does not contain membranous or particulate subcellular components [goid 5829] [pmid 8530382] [evidence TAS]		Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [evidence IEA]; Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme [goid 4867] [pmid 8530382] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 8530382] [evidence TAS]	CAP2; PI8	CAP2; PI8
Homo sapiens	RefSeq	XR_039471.1	ILMN_350300	LOC100129139	XR_039471.1	XR_039471.1		100129139	169166108	XR_039471.1	LOC100129139		ILMN_3270676	0000460324	M	654	GTGAGGAGTGCTTCCGGATGACTGACCAGGAGGTTATTCAAAATCTCTGG				3q25.1a	PREDICTED: Homo sapiens misc_RNA (LOC100129139), miscRNA.					
Homo sapiens	Unigene	Hs.108226	ILMN_75029	HS.108226	Hs.108226		Hs.108226		4288996	AI445550			ILMN_1819256	0006060075	S	303	GAAGGTGGTTCAAATAGGGAAACTGAGGCATTGCCAGGTGGCAGGAAGGC	8	-	23407994-23408009:23408012-23408016:23408018-23408046		tj30e12.x1 NCI_CGAP_Pan1 Homo sapiens cDNA clone IMAGE:2143054 3, mRNA sequence					
Homo sapiens	RefSeq	NM_015541.2	ILMN_3319	LRIG1	NM_015541.2	NM_015541.2		26018	54607117	NM_015541.2	LRIG1	NP_056356.2	ILMN_1707342	0002450367	S	4308	GAAACTGAGCTGGGACTGGAAAGGACAGCCCTTGACCTGGGTTCTGGGTA	3	-	66512619-66512668	3p14.1c	Homo sapiens leucine-rich repeats and immunoglobulin-like domains 1 (LRIG1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LIG-1; LIG1; DKFZP586O1624	LIG-1; LIG1; DKFZP586O1624
Homo sapiens	RefSeq	NM_015541.2	ILMN_3319	LRIG1	NM_015541.2	NM_015541.2		26018	54607117	NM_015541.2	LRIG1	NP_056356.2	ILMN_2128795	0005090408	S	4434	CAAGGTCCTTCAAATGTTCCTTTGGCCAAAAGCTGAAGGGAGTTACTGAG	3	-	66512493-66512542	3p14.1c	Homo sapiens leucine-rich repeats and immunoglobulin-like domains 1 (LRIG1), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [evidence IEA]	LIG-1; LIG1; DKFZP586O1624	LIG-1; LIG1; DKFZP586O1624
Homo sapiens	RefSeq	NM_002966.2	ILMN_15502	S100A10	NM_002966.2	NM_002966.2		6281	115298655	NM_002966.2	S100A10	NP_002957.1	ILMN_2046730	0000540681	S	811	GAGCAGTTCGCTCCTCCCTGATAAGAGTTGTCCCAAAGGGTCGCTTAAGG	1	-	151955580-151955629	1q21.3a	Homo sapiens S100 calcium binding protein A10 (S100A10), mRNA.	A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [pmid 18029348] [evidence IDA]	The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 1831433] [evidence NAS]	Interacting selectively with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function [goid 5102] [pmid 1831433] [evidence NAS]; Interacting selectively with calcium ions (Ca2+) [goid 5509] [evidence IEA]	ANX2L; MGC111133; GP11; ANX2LG; p10; P11; Ca[1]; CAL1L; 42C; CLP11	ANX2L; MGC111133; ANX2LG; GP11; p10; P11; Ca[1]; CAL1L; 42C; CLP11
Homo sapiens	RefSeq	NM_001012418.3	ILMN_3034	MYLK4	NM_001012418.3	NM_001012418.3		340156	167466232	NM_001012418.3	MYLK4	NP_001012418.2	ILMN_3239568	0000130437	S	5391	GTGCGCTGTGCTTTGTATAAGTGGTCTTTCTATGGGCAGTTTCACCTTCC	6	-	2664182-2664231	6p25.2b	Homo sapiens myosin light chain kinase family, member 4 (MYLK4), mRNA.		The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	SgK085	
Homo sapiens	RefSeq	NM_005472.3	ILMN_22298	KCNE3	NM_005472.4	NM_005472.4		10008	115387116	NM_005472.4	KCNE3	NP_005463.1	ILMN_1789387	0000990239	S	2894	CTGCAAACCTGTGCTGAGCCCTGTTGCTCAAGCCCTTCCTCATCTCTTCT	11	-	74166012-74166061	11q13.4c	Homo sapiens potassium voltage-gated channel, Isk-related family, member 3 (KCNE3), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of charged atoms or small charged molecules into, out of, within or between cells [goid 6811] [evidence IEA]; The directed movement of potassium ions (K+) into, out of, within or between cells [goid 6813] [evidence IEA]	Catalysis of the transmembrane transfer of an ion by a voltage-gated channel. An ion is an atom or group of atoms carrying an electric charge by virtue of having gained or lost one or more electrons [goid 5244] [evidence IEA]; Catalysis of the transmembrane transfer of a potassium ion by a voltage-gated channel [goid 5249] [evidence IEA]; Interacting selectively with potassium (K+) ions [goid 30955] [evidence IEA]	MiRP2; MGC102685; DKFZp781H21101; HOKPP; MGC129924	MiRP2; DKFZp781H21101; HOKPP; MGC129924
Homo sapiens	RefSeq	NM_153002.1	ILMN_20970	GPR156	NM_153002.1	NM_153002.1		165829	23308584	NM_153002.1	GPR156	NP_694547.1	ILMN_1731498	0007560494	S	2332	ACATCAGACACTGACCCTGAGCCTACTGGGGGGCTGGCTTCCTGGGAAAA	3	-	121368632-121368681	3q13.33a	Homo sapiens G protein-coupled receptor 156 (GPR156), mRNA.	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins [goid 5886] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals [goid 6979] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [evidence IEA]; The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand [goid 7186] [evidence IEA]	Catalysis of the reaction: donor + H2O2 = oxidized donor + 2 H2O [goid 4601] [evidence IEA]; Combining with an extracellular or intracellular messenger to initiate a change in cell activity [goid 4872] [evidence IEA]; A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers [goid 4930] [evidence IEA]; Combining with the amino acid gamma-aminobutyric acid (GABA, 4-aminobutyrate) to initiate a change in cell activity. GABA-B receptors are G-protein coupled receptors [goid 4965] [evidence IEA]; Interacting selectively with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring [goid 20037] [evidence IEA]	GABABL; PGR28; MGC142261	GABABL; PGR28; MGC142261
Homo sapiens	RefSeq	NM_022156.3	ILMN_1077	DUS1L	NM_022156.3	NM_022156.3		64118	40807365	NM_022156.3	DUS1L	NP_071439.3	ILMN_1653342	0004040332	S	1506	CCAAATTGGAGAAGTCTCTGGCCTGGAAAGAGGCCCAGCCTGAGCTGCAG	17	-	80016059-80016108	17q25.3g	Homo sapiens dihydrouridine synthase 1-like (S. cerevisiae) (DUS1L), mRNA.		The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation [goid 8152] [evidence IEA]; The process by which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group [goid 8033] [evidence IEA]; The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic [goid 3824] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]; Catalysis of the reaction: tRNA-uracil + acceptor = tRNA-dihydrouridine + reduced acceptor [goid 17150] [evidence IEA]; Interacting selectively with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes [goid 50660] [evidence IEA]	DUS1; PP3111	DUS1; PP3111
Homo sapiens	RefSeq	XM_944165.1	ILMN_33635	LOC648249	XM_944165.1	XM_944165.1		648249	88951508	XM_944165.1	LOC648249	XP_949258.1	ILMN_1665148	0002650400	A	1804	ATCCTCCAGGAATACTGCCACTGGAGCCACTCCAATTGCTGGCCGCTTCA					PREDICTED: Homo sapiens similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag), transcript variant 3 (LOC648249), mRNA.					
Homo sapiens	RefSeq	XM_944165.1	ILMN_33635	LOC648249	XM_944165.1	XM_944165.1		648249	88951508	XM_944165.1	LOC648249	XP_949258.1	ILMN_1676219	0003840451	I	383	TCAGCTTGGGCTGCAACAGAATACCACAGATTTTGTGGCTTAAAGAATGG					PREDICTED: Homo sapiens similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor) (Colon carcinoma laminin-binding protein) (NEM/1CHD4) (Multidrug resistance-associated protein MGr1-Ag), transcript variant 3 (LOC648249), mRNA.					
Homo sapiens	RefSeq	NM_001040653.1	ILMN_180915	ZXDC	NM_001040653.1	NM_001040653.1		79364	98961137	NM_001040653.1	ZXDC	NP_001035743.1	ILMN_2348512	0005080121	A	3983	GTGGGGGCTCAGCAAGAACTGATTACCGAGCCATTCAACTAGCCAAGGAA	3	-	127661216-127661265	3q21.2c	Homo sapiens ZXD family zinc finger C (ZXDC), transcript variant 2, mRNA.	The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm [goid 5622] [evidence IEA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]	The synthesis of either RNA on a template of DNA or DNA on a template of RNA [goid 6350] [evidence IEA]; Any process that modulates the frequency, rate or extent of DNA-dependent transcription [goid 6355] [evidence IEA]	Interacting selectively with any nucleic acid [goid 3676] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein or proteins [goid 42802] [pmid 17493635] [evidence IPI]; Interacting selectively with any metal ion [goid 46872] [evidence IEA]	DKFZp547N024; FLJ13861; ZXDL; MGC11349	DKFZp547N024; FLJ13861; ZXDL; MGC11349
Homo sapiens	RefSeq	NM_007262.3	ILMN_6178	PARK7	NM_007262.3	NM_007262.3		11315	34222306	NM_007262.3	PARK7	NP_009193.2	ILMN_1744713	0000610193	S	585	AATTGTTGAAGCCCTGAATGGCAAGGAGGTGGCGGCTCAAGTGAAGGCTC	1	+	7967632-7967681	1p36.23b	Homo sapiens Parkinson disease (autosomal recessive, early onset) 7 (PARK7), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 12446870] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 12446870] [evidence IDA]	A series of molecular signals within the cell that are mediated by a member of the Ras superfamily of proteins switching to a GTP-bound active state [goid 7265] [pmid 9070310] [evidence TAS]	Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17510388] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 15983381] [evidence IPI]	FLJ27376; DJ-1; DJ1	FLJ27376; DJ1; DJ-1
Homo sapiens	RefSeq	NM_152338.1	ILMN_28286	JCLN	NM_152338.1	NM_152338.1		123887	22748736	NM_152338.1	JCLN	NP_689551.1	ILMN_3249142	0006550066	S	540	TGAGGAGTAAGAACTCCCTTATCACTAACCCCCATCCAAATGGCTCAATA	16	+	79066-79115		Homo sapiens jacalin-like lectin domain containing (JCLN), mRNA.				MGC34820	MGC34820
Homo sapiens	RefSeq	NM_152338.1	ILMN_28286	JCLN	NM_152338.1	NM_152338.1		123887	22748736	NM_152338.1	JCLN	NP_689551.1	ILMN_2121774	0003370215	S	541	GAGGAGTAAGAACTCCCTTATCACTAACCCCCATCCAAATGGCTCAATAA	16	+	79067-79116		Homo sapiens jacalin-like lectin domain containing (JCLN), mRNA.				MGC34820	MGC34820
Homo sapiens	RefSeq	NM_017510.3	ILMN_15955	TMED9	NM_017510.4	NM_017510.4		54732	94721306	NM_017510.4	TMED9	NP_059980.2	ILMN_1743655	0005390202	S	1114	ACCCACCTGCCACCCTGGGAACCTCACTGTTCTCTCTTTCAGCCTAGACC	5	+	176955426-176955475	5q35.3a	Homo sapiens transmembrane emp24 protein transport domain containing 9 (TMED9), mRNA.	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [evidence IEA]; The lipid bilayer surrounding the endoplasmic reticulum [goid 5789] [evidence IEA]; A complex system of membrane-bounded compartments located between endoplasmic reticulum (ER) and the Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport [goid 5793] [pmid 15308636] [evidence IDA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]	The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism [goid 6810] [evidence IEA]		HSGP25L2G	HSGP25L2G
Homo sapiens	RefSeq	NM_005426.2	ILMN_178901	TP53BP2	NM_005426.2	NM_005426.2		7159	112799845	NM_005426.2	TP53BP2	NP_005417.1	ILMN_2270299	0005570201	I	482	CATCATGTTGGCCAGGATGGTCTCGATCTCCTGACCTTGTGATCCGCCTG	1	-	224005975-224006024	1q41e-q42.11a	Homo sapiens tumor protein p53 binding protein, 2 (TP53BP2), transcript variant 2, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 15782125] [evidence TAS]	A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle the cell and result in cell death. Apoptosis begins internally with condensation and subsequent fragmentation of the cell nucleus (blebbing) while the plasma membrane remains intact. Other characteristics of apoptosis include DNA fragmentation and the exposure of phosphatidyl serine on the cell surface [goid 6915] [evidence IEA]; A process that directly activates any of the steps required for cell death by apoptosis [goid 6917] [pmid 11684014] [evidence IDA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 9748285] [evidence TAS]; The process whose specific outcome is the progression of the central nervous system over time, from its formation to the mature structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord [goid 7417] [evidence IEA]; The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood [goid 7507] [evidence IEA]; The process whose specific outcome is the progression of an embryo over time, from zygote formation until the end of the embryonic life stage. The end of the embryonic life stage is organism-specific and may be somewhat arbitrary; for mammals it is usually considered to be birth, for insects the hatching of the first instar larva from the eggshell [goid 9792] [evidence IEA]; A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays [goid 10212] [evidence IEA]; Any process that stops, prevents or reduces the rate or extent of progression through the cell cycle [goid 45786] [pmid 14729977] [evidence TAS]	Interacting selectively and simultaneously with one or more signal transduction molecules, usually acting as a scaffold to bring these molecules into close proximity either using their own SH2/SH3 domains (e.g. Grb2) or those of their target molecules (e.g. SAM68) [goid 5070] [pmid 8668206] [evidence TAS]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 14729977] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 11684014] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 12694406] [evidence IPI]; Interacting selectively with a SH3 domain (Src homology 3) of a protein, small protein modules containing approximately 50 amino acid residues found in a great variety of intracellular or membrane-associated proteins [goid 17124] [evidence IEA]; Interacting selectively with NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters [goid 51059] [pmid 10498867] [evidence IPI]	p53BP2; ASPP2; 53BP2; PPP1R13A; BBP	53BP2; BBP; p53BP2; ASPP2; PPP1R13A
Homo sapiens	RefSeq	NM_021635.2	ILMN_5178	PBOV1	NM_021635.2	NM_021635.2		59351	93204869	NM_021635.2	PBOV1	NP_067648.1	ILMN_2067303	0004230537	S	1999	CCTTTGTCGTGTTTCTTGCTCCCAGACCAAGGCACTGACGACAGTACTGA	6	-	138579272-138579321	6q23.3d	Homo sapiens prostate and breast cancer overexpressed 1 (PBOV1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]			UC28; UROC28; dJ171N11.2	UC28; UROC28; dJ171N11.2
Homo sapiens	RefSeq	NM_138452.1	ILMN_15545	DHRS1	NM_138452.1	NM_138452.1		115817	19923982	NM_138452.1	DHRS1	NP_612461.1	ILMN_1807206	0001470017	S	1317	TATGAAGAGAAGCCCTCTGCTGTGTGTCCGTGGTGAGTTCTGGGGTGCGC	14	-	23829749-23829798	14q12a	Homo sapiens dehydrogenase/reductase (SDR family) member 1 (DHRS1), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 18029348] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 18029348] [evidence IDA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached) [goid 5783] [pmid 11256614] [evidence IDA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]	The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons [goid 55114] [evidence IEA]	The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule [goid 5488] [evidence IEA]; Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced [goid 16491] [evidence IEA]	FLJ25430; MGC20204	FLJ25430; MGC20204
Homo sapiens	RefSeq	XM_930876.1	ILMN_170453	LOC653188	XR_018073.1	XR_018073.1		653188	113416955	XR_018073.1	LOC653188		ILMN_1763628	0007150088	I	814	CCTTGGACAATCAGGGTGTACTAGGAGAAAACATGCTGTGAGATGGGATG				5q13.2a	PREDICTED: Homo sapiens similar to Beta-glucuronidase precursor (LOC653188), mRNA.					
Homo sapiens	RefSeq	NM_032589.2	ILMN_22375	DSCR8	NM_032589.2	NM_032589.2		84677	44680115	NM_032589.2	DSCR8	NP_115978.1	ILMN_1698117	0001340328	I	251	CACGGATCACTGCAGCCTCCACCTCCCAGTTCAAGAAATTCTCATGTCTC	21	+	38448418-38448467	21q22.13b	Homo sapiens Down syndrome critical region gene 8 (DSCR8), transcript variant 1, mRNA.	The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together [goid 5575] [evidence ND ]	Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end [goid 8150] [evidence ND ]	Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions [goid 3674] [evidence ND ]	MTAG2; C21orf65; MMA-1	MTAG2; C21orf65; MMA-1
Homo sapiens	RefSeq	NM_001274.2	ILMN_25327	CHEK1	NM_001274.3	NM_001274.3		1111	141803244	NM_001274.3	CHEK1	NP_001265.1	ILMN_1664630	0007200270	S	1584	GATCGGACCATCGGCTCTGGGGAATCCTGGTGAATATAGTGCTGCTATGT	11	+	125030424-125030425:125030426-125030473	11q24.2b	Homo sapiens CHK1 checkpoint homolog (S. pombe) (CHEK1), mRNA.	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus [goid 794] [pmid 9382850] [evidence TAS]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 9278512] [evidence EXP]; That part of the nuclear content other than the chromosomes or the nucleolus [goid 5654] [pmid 12399544] [evidence EXP]; The Y-shaped region of a replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes [goid 5657] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	A signal transduction pathway, induced by DNA damage, that blocks cell cycle progression (in G1, G2 or metaphase) or slows the rate at which S phase proceeds [goid 77] [pmid 9278511] [evidence TAS]; Any process that modulates the frequency, rate or extent of CDK activity [goid 79] [pmid 9278511] [evidence TAS]; Progression from G2 phase to M phase of the mitotic cell cycle [goid 86] [evidence IEA]; The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA [goid 6260] [pmid 12791985] [evidence EXP]; The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway [goid 6281] [evidence IEA]; The process of introducing a phosphate group on to a protein [goid 6468] [evidence IEA]; The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity [goid 7131] [pmid 9278511] [evidence TAS]; The generation and maintenance of gametes. A gamete is a haploid reproductive cell [goid 7276] [pmid 9382850] [evidence TAS]; Any process that stops, prevents or reduces the rate or extent of cell proliferation [goid 8285] [pmid 9278511] [evidence TAS]	Interacting selectively with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose moiety [goid 166] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [evidence IEA]; Catalysis of the reaction: ATP + a protein serine/threonine = ADP + protein serine/threonine phosphate [goid 4674] [pmid 9278512] [evidence EXP]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17157788] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 17292828] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16963448] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules) [goid 5515] [pmid 16330544] [evidence IPI]; Interacting selectively with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator [goid 5524] [evidence IEA]; Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2 [goid 16740] [evidence IEA]	CHK1	CHK1
Homo sapiens	RefSeq	NM_001011718.1	ILMN_13046	XKR7	NM_001011718.1	NM_001011718.1		343702	58743322	NM_001011718.1	XKR7	NP_001011718.1	ILMN_1789691	0004480484	S	2810	GCAGGTGAGGTTTTAGCACAGTTATCAGAGGAACTGATCCAGAAGCAGGC	20	+	30049817-30049866	20q11.21b	Homo sapiens XK, Kell blood group complex subunit-related family, member 7 (XKR7), mRNA.	Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]			C20orf159; dJ310O13.4	C20orf159; dJ310O13.4
Homo sapiens	RefSeq	XM_941844.1	ILMN_183566	LOC729559	XM_001130627.1	XM_001130627.1		729559	113403781	XM_001130627.1	LOC729559	XP_001130627.1	ILMN_1716353	0002320376	I	839	AGAGCCTTGCTCAGGACAAGTTGGATCTGAACTGCCTTGTCACCCAGCTG	1	-	16825084-16825087:16825435-16825480	1p36.13e	PREDICTED: Homo sapiens similar to ciliary rootlet coiled-coil, rootletin (LOC729559), mRNA.					
Homo sapiens	RefSeq	XM_928729.1	ILMN_183566	LOC729559	XM_001130627.1	XM_001130627.1		729559	113403781	XM_001130627.1	LOC729559	XP_001130627.1	ILMN_1807136	0003130041	S	1859	GCTGCAGAGAGCATTTTTGCACATGTATCGTGGCAGATGTAGGCCAGAGG	1	-	16817573-16817622	1p36.13e	PREDICTED: Homo sapiens similar to ciliary rootlet coiled-coil, rootletin (LOC729559), mRNA.					
Homo sapiens	RefSeq	XM_001720097.1	ILMN_337540	LOC100133875	XM_001720097.1	XM_001720097.1		100133875	169217605	XM_001720097.1	LOC100133875	XP_001720149.1	ILMN_3237878	0006330612	S	641	GGGCAGCTGATTCCCCGCTGCGTCTAAAATCAAAGCGCCAATCTCATAAG					PREDICTED: Homo sapiens similar to Leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3 (LOC100133875), partial mRNA.					
Homo sapiens	RefSeq	NM_053280.3	ILMN_27840	ODF3	NM_053280.3	NM_053280.3		113746	31559770	NM_053280.3	ODF3	NP_444510.2	ILMN_3245811	0002760324	S	968	AGGTGACCCTGACCAAGCCCTGCGCCCCAGTTGTCACCTTCGGCATCAAA	11	+	189508-189509:189944-189991	11p15.5d	Homo sapiens outer dense fiber of sperm tails 3 (ODF3), mRNA.	Structure or material found in the flagella of mammalian sperm that surrounds each of the nine microtubule doublets, giving a 9 + 9 + 2 arrangement rather than the 9 + 2 pattern usually seen. These dense fibers are stiff and noncontractile [goid 1520] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]	The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult) [goid 7275] [evidence IEA]; The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis [goid 7283] [evidence IEA]; The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate [goid 30154] [evidence IEA]		hSHIPPO; TISP50; SHIPPO1	hSHIPPO; TISP50; SHIPPO1
Homo sapiens	RefSeq	NR_001292.1	ILMN_4101	SNORD108	NR_001292.1	NR_001292.1		338427	30089680	NR_001292.1	SNORD108		ILMN_1780508	0002230066	S	22	TTTCTTGAATTGGATGACACTTTCCATTCCTGCAAAGGGAGCGTGAGGGC	15	+	22783186-22783233:25232072-25232073	15q11.2e	Homo sapiens small nucleolar RNA, C/D box 108 (SNORD108), small nucleolar RNA.				HBII-437	HBII-437
Homo sapiens	RefSeq	NM_017541.2	ILMN_11890	CRYGS	NM_017541.2	NM_017541.2		1427	13377003	NM_017541.2	CRYGS	NP_060011.1	ILMN_1792597	0006100064	S	448	GCTGGAGGGTGTCTGGATTTTCTATGAGCTACCCAACTACCGTGGCAGGC	3	-	187739270-187739319	3q27.3a	Homo sapiens crystallin, gamma S (CRYGS), mRNA.			The action of a molecule that contributes to the structural integrity of the lens of an eye [goid 5212] [evidence IEA]	CRYG8	CRYG8
Homo sapiens	RefSeq	XM_926248.1	ILMN_45365	LOC642851	XM_926248.1	XM_926248.1		642851	89041530	XM_926248.1	LOC642851	XP_931341.1	ILMN_1689040	0003890546	S	1	ATGATTTTATGGAAATACAGAAGGCTCTTACGCAAGTGCCTGACATACTT	17	+	34640958-34641007	17q12c	PREDICTED: Homo sapiens similar to upstream binding protein 1 (LOC642851), mRNA.					
Homo sapiens	RefSeq	XM_942031.1	ILMN_44038	LOC652540	XM_942031.1	XM_942031.1		652540	89063014	XM_942031.1	LOC652540	XP_947124.1	ILMN_1654288	0002100438	S	170	ATTGGAATTCAACAGAAACGAATGGAATAGACTGGAGTGAAATGGAGTCG					PREDICTED: Homo sapiens hypothetical protein LOC652540 (LOC652540), mRNA.					
Homo sapiens	RefSeq	XM_939099.1	ILMN_46220	LOC650010	XM_939099.1	XM_939099.1		650010	89061578	XM_939099.1	LOC650010	XP_944192.1	ILMN_1786955	0000630390	S	2045	GGGAACAGAAGAAAGGAGCCTTCAGGGTGTTTATCGTCCAAAACCTCCAG					PREDICTED: Homo sapiens similar to Nucleolar GTP-binding protein 1 (Chronic renal failure gene protein) (GTP-binding protein NGB) (LOC650010), mRNA.					
Homo sapiens	RefSeq	XM_929266.1	ILMN_45298	LOC646332	XM_929266.1	XM_929266.1		646332	89044848	XM_929266.1	LOC646332	XP_934359.1	ILMN_1762528	0002510326	S	989	ACTGCCAGAACTACTTGACTGAGCTGTTGCTGTGTTGGACACTTGCTCCC	18	+	14234761-14234783:14239431-14239457		PREDICTED: Homo sapiens similar to Ankyrin repeat domain protein 18A (LOC646332), mRNA.					
Homo sapiens	Unigene	Hs.579069	ILMN_131250	HS.579069	Hs.579069		Hs.579069		11599820	BF514641			ILMN_1873948	0001690414	S	373	GATTGATTAGTGATGTCTGCCAGGGGCGCAAGGAGGAAGACCGTGGTGCC	17	+	59404535-59404584		UI-H-BW1-anh-b-12-0-UI.s1 NCI_CGAP_Sub7 Homo sapiens cDNA clone IMAGE:3082318 3, mRNA sequence					
Homo sapiens	RefSeq	NM_145037.1	ILMN_18334	FAM55C	NM_145037.1	NM_145037.1		91775	21450780	NM_145037.1	FAM55C	NP_659474.1	ILMN_1814924	0000460487	S	3604	ATAGGAGGGCCCCAGATCTTACTTTCCTGTCCTTGAGGAACACCTTCAAG	3	+	103024820-103024869	3q12.3a	Homo sapiens family with sequence similarity 55, member C (FAM55C), mRNA.	The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite [goid 5576] [evidence IEA]			MSTP115; MGC15606; MST115; FLJ30102	MSTP115; MGC15606; MST115; FLJ30102
Homo sapiens	RefSeq	NM_015454.1	ILMN_169362	LARP7	NM_015454.1	NM_015454.1		51574	109809738	NM_015454.1	LARP7	NP_056269.1	ILMN_2392717	0005700739	A	1532	GCACAGAGCCTCTACCTGGCAGGAAACAAGTCCGGGATACTTTGGCAGCA	4	+	113571704-113571738:113574233-113574247	4q25f	Homo sapiens La ribonucleoprotein domain family, member 7 (LARP7), transcript variant 2, mRNA.				MGC104360; DKFZP564K112; HDCMA18P	MGC104360; DKFZP564K112; HDCMA18P
Homo sapiens	Unigene	Hs.7415	ILMN_70991	HS.7415	Hs.7415		Hs.7415		27838537	BX113955			ILMN_1882860	0001940711	S	161	GGGTTCAGCCTGTTCACCATCTCAAAGGGATCGGAGTTGGCATTTAGCTG	13	-	61795968-61796017		BX113955 Soares infant brain 1NIB Homo sapiens cDNA clone IMAGp998I08161, mRNA sequence					
Homo sapiens	RefSeq	NM_014624.3	ILMN_13161	S100A6	NM_014624.3	NM_014624.3		6277	52352807	NM_014624.3	S100A6	NP_055439.1	ILMN_1713636	0002810315	S	527	GGAGTATGTCACCTTCCTGGGGGCCTTGGCTTTGATCTACAATGAAGCCC	1	-	153507182-153507231	1q21.3c	Homo sapiens S100 calcium binding protein A6 (S100A6), mRNA.	Projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork [goid 1726] [pmid 10913138] [evidence IDA]; A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [pmid 10913138] [evidence IDA]; The double lipid bilayer enclosing the nucleus and separating its contents from the rest of the cytoplasm; includes the intermembrane space, a gap of width 20-40 nm (also called the perinuclear space) [goid 5635] [pmid 12577318] [evidence NAS]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 10913138] [evidence IDA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [pmid 16130169] [evidence TAS]	The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division [goid 7049] [evidence IEA]; The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell [goid 7165] [pmid 16130169] [evidence TAS]; Generation of a long process of a neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells [goid 7409] [pmid 12152788] [evidence NAS]; The multiplication or reproduction of cells, resulting in the expansion of a cell population [goid 8283] [evidence IEA]; Any process that activates or increases the frequency, rate or extent of multiplication or reproduction of fibroblast cells [goid 48146] [pmid 12577318] [evidence NAS]	Interacting selectively with calcium ions (Ca2+) [goid 5509] [pmid 12577318] [evidence NAS]; The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation [goid 8083] [evidence IEA]; Interacting selectively with zinc (Zn) ions [goid 8270] [evidence IEA]; Interacting selectively with an identical protein to form a homodimer [goid 42803] [pmid 10913138] [evidence IDA]; Interacting selectively with S100 beta protein. S100 is a small calcium and zinc binding protein produced in astrocytes that is implicated in Alzheimer's disease, Down Syndrome and ALS [goid 48154] [pmid 10913138] [evidence IPI]; Interacting selectively with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium [goid 48306] [pmid 10913138] [evidence IDA]	PRA; CABP; 2A9; 5B10; CACY	PRA; CABP; 2A9; 5B10; CACY
Homo sapiens	RefSeq	NM_018453.3	ILMN_1031	EAPP	NM_018453.3	NM_018453.3		55837	117938267	NM_018453.3	EAPP	NP_060923.2	ILMN_3243744	0000010452	S	781	GAACAGGAAGAAAAGGCGGGTCCATAAGAAGATGAGGTCTAACCGGGAAG	14	-	34985652-34985701	14q13.1c	Homo sapiens E2F-associated phosphoprotein (EAPP), mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures [goid 5737] [evidence IEA]; A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions [goid 5794] [pmid 18029348] [evidence IDA]			FLJ20578; MGC4957; BM036; EAPP; C14orf11	FLJ20578; BM036; EAPP
Homo sapiens	RefSeq	NM_018622.5	ILMN_163763	PARL	NM_018622.5	NM_018622.5		55486	83641879	NM_018622.5	PARL	NP_061092.3	ILMN_2341467	0003390289	A	1200	AACTGGGATTGGACAGTAGTGGTGCATCTGGTCCTTGCCGCCTGAGAGCC	3	-	185030029-185030078	3q27.1a	Homo sapiens presenilin associated, rhomboid-like (PARL), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent [goid 5634] [evidence IEA]; A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration [goid 5739] [evidence IEA]; The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae [goid 5743] [evidence IEA]; Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins [goid 16020] [evidence IEA]; Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane [goid 16021] [evidence IEA]		Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine) [goid 4252] [evidence IEA]; Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid [goid 8233] [evidence IEA]	PSARL; PSENIP2; PSARL1; RHBDS1; PRO2207	PSARL; PSENIP2; PSARL1; RHBDS1; PRO2207
Homo sapiens	RefSeq	NM_018622.5	ILMN_163763	PARL	NM_018622.5	NM_018622.5		55486	83641879	NM_018622.5	PARL	NP_061092.3	ILMN_2257665	0004390594	I	757	CTTCCAGCATAGTGAACATTCTGGGTCAAGAGCAGTTCATGGCAGTGTAC	3	-	185042789-185042838	3q27.1a	Homo sapiens presenilin associated, rhomboid-like (PARL), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA.	A membrane-bounded